BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781003|ref|YP_003065416.1| hypothetical protein
CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62]
         (304 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254781003|ref|YP_003065416.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040680|gb|ACT57476.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 304

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 304/304 (100%), Positives = 304/304 (100%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY
Sbjct: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN
Sbjct: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS
Sbjct: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE
Sbjct: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI
Sbjct: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300

Query: 301 DYDF 304
           DYDF
Sbjct: 301 DYDF 304


>gi|148982124|ref|ZP_01816600.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3]
 gi|145960657|gb|EDK26003.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3]
          Length = 291

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 23/308 (7%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +++    L+   +    ++A+ + + SWNI  LS  E V+ + +   R  +D+  L +Y 
Sbjct: 1   MKRLQKWLMLGCLLSNQAIAEPLTISSWNIEWLSTNEAVNKFSDK--RDQADFDKLGRYF 58

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           ++L+AD+V  QE+   NA+ +V       +        N + +    + +T  AVRK   
Sbjct: 59  QSLNADVVAFQEVDDVNAIQRVAGDQYQILMSDRALPKNGNHQFKEVNQYTGFAVRKGVA 118

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                 +PL    ++ S +  R A  +++E   K I +L +HLK+ C   S     +  C
Sbjct: 119 LTDYADFPL----ETTSNSKLRFASYIVIETETKPIHMLSVHLKAGC---SGAYKSNRDC 171

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           S L +QAQ L  WI Q++ +   + I GDFN  + Y    D  WK +          ++ 
Sbjct: 172 SRLKEQAQQLNKWIKQRERNNEDYAILGDFNHNLAYS--RDWIWKELTQYTDAQLATRKT 229

Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            + C      N ++  + +  ID+ V+ ++           + ++   D+     +LSDH
Sbjct: 230 RADCKVRSNRNNHRTHQFRSVIDHIVVSESL----NAAPAKQQVFKTQDVLDY--KLSDH 283

Query: 296 CPISIDYD 303
           CP+S   +
Sbjct: 284 CPVSTTIN 291


>gi|84393951|ref|ZP_00992692.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01]
 gi|84375450|gb|EAP92356.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01]
          Length = 292

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 74/307 (24%), Positives = 137/307 (44%), Gaps = 23/307 (7%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +++    ++   +  + + A+ + + SWNI  LS     ++ K S KR  +D+  L QY 
Sbjct: 1   MKRLQKWIMLACLLSSQTFAEPLTISSWNIEWLSTN--EAVNKFSSKRNQADFDKLEQYF 58

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           ++LDAD+V  QE+   N + ++       +        N +++    + +T  AVRK   
Sbjct: 59  QSLDADVVAFQEVDDVNDIQRITGNQYKILMSDRALPKNSNRQFKEVNQYTGFAVRKGIT 118

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                 +PL    +  + +  R A  ++VE +   I +L +HLK+ C   S     +  C
Sbjct: 119 LTDYADFPL----ERSANSKLRFASYMVVETDSNPIHMLSVHLKAGC---SGAYKSNRDC 171

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           S L  QA+ L  WI Q++     + I GDFN  ++Y    D  WK +  N       ++ 
Sbjct: 172 SRLKDQAKQLNKWIQQRERKGEDYAILGDFNHNLSYS--RDWMWKDMTQNTDAQLVTRKT 229

Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            + C      N ++  + +  ID+ V+ ++           + ++   D+     +LSDH
Sbjct: 230 RADCKVRSNRNNHRTHQFRSVIDHIVVSKSL----DASPAKQKVFETQDVLDY--KLSDH 283

Query: 296 CPISIDY 302
           CP+S   
Sbjct: 284 CPVSTTI 290


>gi|218676474|ref|YP_002395293.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus
           LGP32]
 gi|218324742|emb|CAV26393.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus
           LGP32]
          Length = 291

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 23/307 (7%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +++    ++   +  + +  + + + SWNI  LS  E V+ + +  +R  +D+  L QY 
Sbjct: 1   MKRLQKWIMLGCLLSSQAFGEPLTISSWNIEWLSTNEAVNKFSD--QRDQADFDKLEQYF 58

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           ++L++D++  QE+   NA+ ++       +        N + +    + +T  AVRK  +
Sbjct: 59  QSLNSDVLAFQEVDDINAIQRIAGDQYKILMSDRALPENSNHQFKEVNQYTGFAVRKGII 118

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                 +PL         +  R A  ++VE + K I +L +HLK+ C   S     +  C
Sbjct: 119 LTDYADFPLESGA----NSKLRFASYMVVETDTKPIHMLSVHLKAGC---SGAYKSNRDC 171

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           S L  QAQ L  WI Q++     + I GDFN  ++Y    D  WK +  N       ++ 
Sbjct: 172 SRLKDQAQQLNKWIQQRERQGQDYAILGDFNHNLSYS--RDWMWKDLTQNADAQLATRKT 229

Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            + C      N ++  + +  ID+ V+ ++           + ++   D+     +LSDH
Sbjct: 230 RADCKVRSNRNNHRTHQFRSVIDHIVVSKSL----DASPAKQKVFETQDVLDY--KLSDH 283

Query: 296 CPISIDY 302
           CP+S   
Sbjct: 284 CPVSTTI 290


>gi|315122019|ref|YP_004062508.1| hypothetical protein CKC_01345 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495421|gb|ADR52020.1| hypothetical protein CKC_01345 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 315

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 166/304 (54%), Positives = 216/304 (71%), Gaps = 8/304 (2%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           ++R   L L F  +P   + AQ++R+ SWNINTLSE+ G+ L KNSV R  +DY LLR+Y
Sbjct: 17  LLRSVALVLFFCFIPN-ENFAQRIRIASWNINTLSEKSGMPLLKNSVVREDADYDLLRRY 75

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           A+ L+ADIV LQEMGSY A+ +VFP++TW I YS      H+         TAI  RK  
Sbjct: 76  AERLNADIVCLQEMGSYAAIKRVFPEDTWEILYSGNDSDEHTVH-------TAIVARKGT 128

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V VL++SY  +      S+AG RR+VE+L E+NG KIW+LDIHLKSFCF+DSL++ Y+ S
Sbjct: 129 VHVLEKSYLSMDTNKLDSKAGKRRSVEILFEVNGIKIWLLDIHLKSFCFVDSLKDAYTLS 188

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           C  L+ Q  WL  WI QKK S +PF+IAGDFNRKIN+ G+ND+ W  I  +  LIR P +
Sbjct: 189 CYTLNLQVNWLNKWIHQKKRSNIPFIIAGDFNRKINHFGDNDELWGKISKDTILIRVPNK 248

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           K S CNA+K++R + PID+FVMDQNAYK+LI+ S+SE+ Y E+DIK RG RLSDHCPI+ 
Sbjct: 249 KRSWCNAHKSIRKREPIDFFVMDQNAYKYLIENSYSEVSYIEEDIKKRGYRLSDHCPITT 308

Query: 301 DYDF 304
           DY+F
Sbjct: 309 DYNF 312


>gi|269959773|ref|ZP_06174152.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835527|gb|EEZ89607.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 287

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/309 (23%), Positives = 121/309 (39%), Gaps = 29/309 (9%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            + +      L    +     + L SWNI  LS   G       V RT  D+  L  Y  
Sbjct: 1   MRSLFVTTILLFSSLSFAQNSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYVD 54

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
              ADI+  QE+ S  A+ K    +            N   + ++ + +T  AVR     
Sbjct: 55  KTQADILAFQEVESAAAIQKAVGNDFTIYLSDRANASNRHLQFNDTNQYTGFAVRNGVNV 114

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           + +          +   +  R A  L++  N   +  +L +HLK+ C   S     +  C
Sbjct: 115 LDK-----PDFSITRGNSKLRFASYLVLNPNQDNETHLLSVHLKAGC---SGAYRNNRDC 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            ++ QQ Q L  WI  ++++   +V+ GDFN  + Y G  D  W+ +  N       K  
Sbjct: 167 KIVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRG--DWLWEVLSDNTDAKLVTKNT 224

Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            + C      N NK  + +  ID+ ++  +        S  + ++   D+     +LSDH
Sbjct: 225 KAECKVRSNRNPNKTHQFRSVIDHIIVSGDL----KASSGVQTVFKTQDVLDY--KLSDH 278

Query: 296 CPISIDYDF 304
           CP+S    F
Sbjct: 279 CPVSTTLSF 287


>gi|269967746|ref|ZP_06181794.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B]
 gi|269827652|gb|EEZ81938.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B]
          Length = 287

 Score =  170 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 75/310 (24%), Positives = 125/310 (40%), Gaps = 30/310 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R   + L+      + +    + L SWNI  LS   G       V RT  D+  L  Y 
Sbjct: 1   MRSLFVTLILLFSSLSFAQ-NSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYV 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
               ADI+  QE+ S  A+ K    +            N   + ++ + +T  AVR    
Sbjct: 54  DKTQADILAFQEVESVAAMQKAVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVS 113

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPS 180
            +            +   +  R A  L++  N + +  +L +HLK+ C   S     +  
Sbjct: 114 VLDT-----PDFSITRGNSKLRFASYLVLNPNQENETHLLSVHLKAGC---SGAYRNNRD 165

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           C ++ QQ Q L  WI  ++++   +V+ GDFN  + Y G  D  W  I  N S     K+
Sbjct: 166 CKIVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQG--DWLWDVISDNTSAKLVTKD 223

Query: 241 KDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             + C      N NK  + +  ID+ ++  +        S  + ++   D+     +LSD
Sbjct: 224 TKAECKVRSNRNPNKTHQFRSVIDHIIVSGDL----KASSGVQTVFKTQDVLDY--KLSD 277

Query: 295 HCPISIDYDF 304
           HCP+S    F
Sbjct: 278 HCPVSTTLTF 287


>gi|162147973|ref|YP_001602434.1| endonuclease/exonuclease/phosphatase family protein
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542591|ref|YP_002274820.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786550|emb|CAP56132.1| putative endonuclease/exonuclease/phosphatase family
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530268|gb|ACI50205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 290

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 73/304 (24%), Positives = 135/304 (44%), Gaps = 22/304 (7%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYTLLRQ 59
           +R++  A +  +     +  + +++ +WN++ L+ +     +L  +   R  +D   L  
Sbjct: 5   LRQWACAGLVAVALAHPAAGRTIKVSTWNLDWLTARAAGDPTLPPDVHPRADADLRRLAV 64

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           YA  LDADIV  QE+ S    A++FP   + I  + + ++            T +AV   
Sbjct: 65  YAARLDADIVGFQEVDSPALAARLFPPGRYRIVMTADPVV----------QRTGLAVATS 114

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                      L      +    R  +++ +      + VL +HLK+ C  D+  +    
Sbjct: 115 LTIERHPDLAALDVYPPTAPHPLRSGLDVTIGDGTANLRVLVVHLKAGCR-DAAPSDRRA 173

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +C  L++Q   L DW+ Q+++  VPF++ GDFNR +      D F+  +D +  L     
Sbjct: 174 ACLTLARQMAVLDDWVAQRQDEGVPFLVMGDFNRNLT---PGDPFFHLLDQDGPLTLATA 230

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            + S C           ID+ ++   A  +L  +S   + Y+E D  +R   LSDHCP+S
Sbjct: 231 GRASPCWGGTYF-----IDHLLLGNQARGWLRPDSLRVLTYDEQD-PARAPALSDHCPVS 284

Query: 300 IDYD 303
           +  +
Sbjct: 285 VRLE 288


>gi|156976926|ref|YP_001447832.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116]
 gi|156528520|gb|ABU73605.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116]
          Length = 287

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 71/309 (22%), Positives = 120/309 (38%), Gaps = 29/309 (9%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            + +      L    +     V L SWNI  LS   G       V RT  D+  L  Y  
Sbjct: 1   MRSLFVTTILLFSSFSFAQNSVNLTSWNIEWLSIDGG------KVSRTPQDFEKLNHYVD 54

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
              ADI+  QE+ +  AV K    +            N   + ++ + +T  AVR     
Sbjct: 55  KTQADILAFQEVENAAAVQKAVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSV 114

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           + +          +   +  R A  L++  +   +  +L +HLK+ C   S     +  C
Sbjct: 115 LDK-----PDFSITRGNSKLRFASYLVLNPDQDNETHLLSVHLKAGC---SGAYRNNRDC 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            ++ QQ Q L  WI  ++++   +V+ GDFN  + Y G  D  W+ +  N       K  
Sbjct: 167 KIVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRG--DWLWEVLSDNTDAKLVTKNT 224

Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            + C      N  K  + +  ID+ ++  +        S  + ++   D+     +LSDH
Sbjct: 225 KAECKVRSNRNPKKTHQFRSVIDHIIVSGDL----KASSGVQTVFKTQDVLDY--KLSDH 278

Query: 296 CPISIDYDF 304
           CP+S    F
Sbjct: 279 CPVSTTLTF 287


>gi|91224719|ref|ZP_01259980.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01]
 gi|91190607|gb|EAS76875.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01]
          Length = 287

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 74/310 (23%), Positives = 124/310 (40%), Gaps = 30/310 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R   + L+      + +    + L SWNI  LS   G       V RT  D+  L  Y 
Sbjct: 1   MRSLFVTLILLFSSLSFAQ-NSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYV 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
               ADI+  QE+    A+ K    +            N   + ++ + +T  AVR    
Sbjct: 54  DKTQADILAFQEVERAAAIQKAVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVS 113

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPS 180
            + +          +   +  R A  L++  N + +  +L +HLK+ C   S     +  
Sbjct: 114 VLDK-----PDFSITRGNSKLRFASYLVLNPNQENETHLLSVHLKAGC---SGAYRNNRD 165

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           C ++ QQ Q L  WI  ++++   +V+ GDFN  + Y G  D  W  I  N S     K+
Sbjct: 166 CKIVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQG--DWLWDVISDNTSAKLVTKD 223

Query: 241 KDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             + C      N NK  + +  ID+ +   +        S  + ++   D+     +LSD
Sbjct: 224 TKAECKVRSNRNPNKTHQFRSVIDHIIASGDL----KASSGVQTVFKTQDVLDY--KLSD 277

Query: 295 HCPISIDYDF 304
           HCP+S    F
Sbjct: 278 HCPVSTTLTF 287


>gi|153832821|ref|ZP_01985488.1| metal-dependent hydrolase [Vibrio harveyi HY01]
 gi|148870955|gb|EDL69845.1| metal-dependent hydrolase [Vibrio harveyi HY01]
          Length = 287

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 72/309 (23%), Positives = 118/309 (38%), Gaps = 29/309 (9%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            + +      L    +     V L SWNI  LS   G       V RT  D+  L  Y  
Sbjct: 1   MRSLFVTTILLFSSFSFAQNSVNLTSWNIEWLSIDGG------KVSRTPQDFEKLNHYVD 54

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
              ADI+  QE+ S  AV K    +            N   + ++ + +T  AVR     
Sbjct: 55  KTQADILAFQEVESAAAVQKAVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSV 114

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           + +          +   +  R A  L++  +   +  +L +HLK+ C   S     +  C
Sbjct: 115 LDK-----PDFSITRGNSKLRFASYLVLNPDQDNETHLLSVHLKAGC---SGAYRNNRDC 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            ++ QQ Q L  WI  ++ +   +V+ GDFN  + Y G  D  W  +  N       K  
Sbjct: 167 KIVKQQGQALAKWIKARENNKQQYVVLGDFNHNLGYRG--DWLWDVLSDNTDAKLVTKNT 224

Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            + C      N  K  + +  ID+ ++  +        S  + ++   D+     +LSDH
Sbjct: 225 KAECKVRSNRNPKKTHQFRSVIDHIIVSGDL----KASSGVQTVFKTQDVLDY--KLSDH 278

Query: 296 CPISIDYDF 304
           CP+S    F
Sbjct: 279 CPVSTTLTF 287


>gi|58040215|ref|YP_192179.1| hypothetical protein GOX1784 [Gluconobacter oxydans 621H]
 gi|58002629|gb|AAW61523.1| Hypothetical protein GOX1784 [Gluconobacter oxydans 621H]
          Length = 280

 Score =  165 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/300 (21%), Positives = 129/300 (43%), Gaps = 24/300 (8%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           +L  +F         A  ++L +WN++ L        +L K+       D+  L  Y ++
Sbjct: 1   MLVGLFLAGSMGPVSAHTIKLSTWNMDWLTLRPSGDPALPKDVPGGEHRDFAKLAAYVRH 60

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           LD+D+V  +E     A ++VF   T+ I  + + ++              +AVR+     
Sbjct: 61  LDSDVVAFEETDGPLAASRVFSSTTYQIILTPDPVV----------QRVGVAVRRDLHVT 110

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           +      L      +    R  +++ +      + +L +HLK+ C+ D   N    SC  
Sbjct: 111 VNDELSALNVAGPGAPHQLRGGLDVTISDGHASLRLLVVHLKTGCW-DQPLNQRQHSCPT 169

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           L QQ + ++DW+ ++++    + + GDFNR++     +D   + I+    +      K S
Sbjct: 170 LYQQVRIMQDWMLERQDEGEVYAVLGDFNRRLTL---HDPLMQQIEAETPVTLTTAGKAS 226

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            C   +       ID+ ++   A  +L+ +S   + Y  D + +    LSDHCP+S+  +
Sbjct: 227 PCWGGEYF-----IDHILLGNAARDWLVPDSLRVMTYKNDTVPA---GLSDHCPVSVRLE 278


>gi|328470709|gb|EGF41620.1| hypothetical protein VP10329_07912 [Vibrio parahaemolyticus 10329]
          Length = 293

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/312 (23%), Positives = 135/312 (43%), Gaps = 34/312 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R   +  +      + +    + L SWNI  LS   G       V RT+ D+  L QY 
Sbjct: 6   MRSLFVTALLIFSSTSLAQ-NSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYV 58

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKN 120
               ADI+  QE+ S  AV K    + + I+ S     N+   + S+ + +T  AVRK  
Sbjct: 59  DKTQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDI 117

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179
                  + +         +  R A  ++V  N K ++ +L +HLK+ C   S     S 
Sbjct: 118 EVSDPADFSIT-----RGNSKLRFASYIVVNPNQKDELHLLSVHLKAGC---SGAYKNSR 169

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
            C  LSQQ + L  W++++++    + + GDFN  ++Y    D  W  +   +      +
Sbjct: 170 DCQTLSQQGEALAKWVSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTR 227

Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  + C      N +K  + +  ID+ ++       +  ++  + L++  D+     +LS
Sbjct: 228 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 281

Query: 294 DHCPI--SIDYD 303
           DHCP+  ++  +
Sbjct: 282 DHCPVNATVTLN 293


>gi|28900797|ref|NP_800452.1| hypothetical protein VPA0942 [Vibrio parahaemolyticus RIMD 2210633]
 gi|28809243|dbj|BAC62285.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
          Length = 293

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 34/312 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R   +  +      + +    + L SWNI  LS   G       V RT+ D+  L QY 
Sbjct: 6   MRSLFVTALLIFSSTSLAQ-NSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYV 58

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKN 120
               ADI+  QE+ S  AV K    + + I+ S     N+   + S+ + +T  AVRK  
Sbjct: 59  DKTQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDI 117

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179
                  + +         +  R A  ++V  + K ++ +L +HLK+ C   S     S 
Sbjct: 118 EVSDPADFSIT-----RGNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSR 169

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
            C  LSQQ + L  W++++++    + + GDFN  ++Y    D  W  +   +      +
Sbjct: 170 DCQTLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTR 227

Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  + C      N +K  + +  ID+ ++       +  ++  + L++  D+     +LS
Sbjct: 228 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 281

Query: 294 DHCPI--SIDYD 303
           DHCP+  ++  +
Sbjct: 282 DHCPVNATVTLN 293


>gi|37676556|ref|NP_936952.1| hypothetical protein VVA0896 [Vibrio vulnificus YJ016]
 gi|37201098|dbj|BAC96922.1| hypothetical protein [Vibrio vulnificus YJ016]
          Length = 297

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 67/313 (21%), Positives = 128/313 (40%), Gaps = 29/313 (9%)

Query: 2   IRKYVLALVFF-----LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + K+ LAL F      L+P     AQ +   SWN+  LS      + ++   R   D+  
Sbjct: 1   MLKHALALFFTGLVYLLLPTPLLAAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAK 58

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  Y +  ++D++  QE+    A+ KV   N   +F           +  + + +T  A+
Sbjct: 59  LAMYFQKTNSDVLAFQEVNDLAAIKKVVGTNYQILFSDRSNPRYQRFQFDDINQYTGFAI 118

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +K           L     +   +  R A  +++     ++ VL++HLK+ C   S    
Sbjct: 119 KKGIPFRDVGDIQL-----NKGNSKLRFASYVIIGNTSNELHVLNVHLKAGC---SGAYK 170

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + +C  L  ++Q L  WI+Q++ +   +++ GDFN  + Y   ND     +     +  
Sbjct: 171 GNDACRTLRLESQALGQWISQRQSNKQTYLVLGDFNHNLAYR--NDWLMNELTSAGKIHL 228

Query: 237 FPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             ++  + C        NK    +  ID+ ++ +            + L+  +D+     
Sbjct: 229 LTEDTKANCKVRSKKQPNKVHSFRSLIDHIIVSEGLS----ASQAEQKLFTSNDVLKY-- 282

Query: 291 RLSDHCPISIDYD 303
           +LSDHCP+S    
Sbjct: 283 QLSDHCPVSTTVT 295


>gi|260365700|ref|ZP_05778214.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030]
 gi|260896112|ref|ZP_05904608.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466]
 gi|308094717|ref|ZP_05891469.2| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034]
 gi|308126490|ref|ZP_05910491.2| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037]
 gi|308088090|gb|EFO37785.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466]
 gi|308090251|gb|EFO39946.1| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034]
 gi|308109923|gb|EFO47463.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037]
 gi|308111792|gb|EFO49332.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030]
          Length = 288

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 34/312 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R   +  +      + +    + L SWNI  LS   G       V RT+ D+  L QY 
Sbjct: 1   MRSLFVTALLIFSSTSLAQ-NSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYV 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKN 120
               ADI+  QE+ S  AV K    + + I+ S     N+   + S+ + +T  AVRK  
Sbjct: 54  DKTQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDI 112

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179
                  + +         +  R A  ++V  + K ++ +L +HLK+ C   S     S 
Sbjct: 113 EVSDPADFSIT-----RGNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSR 164

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
            C  LSQQ + L  W++++++    + + GDFN  ++Y    D  W  +   +      +
Sbjct: 165 DCQTLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTR 222

Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  + C      N +K  + +  ID+ ++       +  ++  + L++  D+     +LS
Sbjct: 223 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 276

Query: 294 DHCPI--SIDYD 303
           DHCP+  ++  +
Sbjct: 277 DHCPVNATVTLN 288


>gi|262395406|ref|YP_003287259.1| metal-dependent hydrolase [Vibrio sp. Ex25]
 gi|262339000|gb|ACY52794.1| metal-dependent hydrolase [Vibrio sp. Ex25]
          Length = 288

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 34/312 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R   +  +      + +    + L SWNI  LS   G       V RT+ D+  L QY 
Sbjct: 1   MRSLFVTALLIFSSTSLAQ-NSINLTSWNIEWLSINGG------KVSRTSDDFIKLNQYV 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKN 120
               ADI+  QE+ S  AV K    + + I+ S     N+   + S+ + +T  AVRK  
Sbjct: 54  DKTQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDI 112

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179
                  + +  +      +  R A  ++V  N K ++ +L +HLK+ C   S     + 
Sbjct: 113 EVSDPADFSITRS-----NSKLRFASYIVVNPNQKDELHLLSVHLKAGC---SGAYKNNR 164

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +C  LSQQ + L  W++++++    + + GDFN  ++Y    D  W  +   +      +
Sbjct: 165 NCQTLSQQGEALAKWMSEREKKKQQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTR 222

Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  + C      N  K  + +  ID+ ++       +  ++  + L++  D+     +LS
Sbjct: 223 DTKADCKVRSNKNPRKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 276

Query: 294 DHCPI--SIDYD 303
           DHCP+  ++  +
Sbjct: 277 DHCPVNATVTLN 288


>gi|296115009|ref|ZP_06833653.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295978471|gb|EFG85205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 293

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 25/306 (8%)

Query: 3   RKYVLALVFFLV---PCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLL 57
           R +V  L+  +        + A  +RL +WN++ L        +L  +   R  +D   L
Sbjct: 6   RPFVFLLMVLITGGHMPMMAHAMPLRLSTWNLDWLTTRPAGDRALPDDVRPRDMADIVRL 65

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            +YA  L  DI  L+E+ +    A++FP   + I  S +               TA+AVR
Sbjct: 66  ARYAARLHPDIAALEEVDTPELAARLFPAPDYRILISGD----------GVVQKTALAVR 115

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
              +         +      +    R  +++ V      + VL IHLK+ C   +  +  
Sbjct: 116 GGLIVTRHPDVRAIDVYPPDAPRHLRSGLDVTVGDGRASLRVLVIHLKAGCRDGAP-DDR 174

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
            P+C  L +Q   L DWI ++++   PF I GDFN     LG  D     +  N  L+  
Sbjct: 175 RPACRTLYRQVAALTDWIMERQDEGEPFAIMGDFNH---MLGPGDAMLAMLGENGPLVAP 231

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                S C           ID+ V+   A ++L  +S   + Y E D  +   RLSDHCP
Sbjct: 232 TVGLASPCWGGNYF-----IDHIVLGDQARQWLHPDSLRVMTYREHD-PTLQSRLSDHCP 285

Query: 298 ISIDYD 303
           +SI  D
Sbjct: 286 VSIGLD 291


>gi|27366781|ref|NP_762308.1| metal-dependent hydrolase [Vibrio vulnificus CMCP6]
 gi|27358348|gb|AAO07298.1|AE016809_60 Metal-dependent hydrolase [Vibrio vulnificus CMCP6]
          Length = 297

 Score =  162 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 66/313 (21%), Positives = 127/313 (40%), Gaps = 29/313 (9%)

Query: 2   IRKYVLALVFF-----LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + K+ L L F      L+P     AQ +   SWN+  LS      + ++   R   D+  
Sbjct: 1   MLKHTLGLFFTGLVYLLLPTPLLAAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAK 58

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  Y +  ++D++  QE+    A+ KV   N   +F           +  + + +T  A+
Sbjct: 59  LAMYFQKTNSDVLAFQEVNDLAAIKKVVGTNYQILFSDRSNPRYQRFQFDDINQYTGFAI 118

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +K           L     +   +  R A  +++     ++ VL++HLK+ C   S    
Sbjct: 119 KKGIPFRDVGDIQL-----NKGNSKLRFASYVIIGNTSNELHVLNVHLKAGC---SGAYK 170

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + +C  L  ++Q L  WI+Q++ +   +++ GDFN  + Y   ND     +     +  
Sbjct: 171 GNDACRTLRLESQALGQWISQRQSNKQTYLVLGDFNHNLAYR--NDWLMNELTSAGKIHL 228

Query: 237 FPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             ++  + C        NK    +  ID+ ++ +            + L+  +D+     
Sbjct: 229 LTEDTKANCKVRSKKQPNKVHSFRSLIDHIIVSEGLS----ASQAEQKLFTSNDVLKY-- 282

Query: 291 RLSDHCPISIDYD 303
           +LSDHCP+S    
Sbjct: 283 QLSDHCPVSTTVT 295


>gi|295689871|ref|YP_003593564.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
 gi|295431774|gb|ADG10946.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
          Length = 288

 Score =  162 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 81/309 (26%), Positives = 130/309 (42%), Gaps = 29/309 (9%)

Query: 1   MIRKY---VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M+ ++   V+AL    +  +A++   +R+ +WN+  LSE       K    RT +DY  +
Sbjct: 1   MLARFAALVVALFGLALSPSAALTAPLRVATWNMEHLSEDGA----KGCKPRTDADYETM 56

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN---DIHTAI 114
           R+YA+ L+AD+V  +E+ S  A A+VF    + +        N                 
Sbjct: 57  RRYAERLNADVVAFEEVESVKAAARVFDPAKYQLLIEARPAGNPFPCGEGRTLTRQAVGF 116

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSL 173
           A+RK            L   D       R  V++ +   G   + +L +HLKS CF    
Sbjct: 117 AIRKGITVERAPDLTDLQLGDPN----LRGGVDVTIRAPGHAPLRLLAVHLKSGCFA--- 169

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
               + +C+ L +Q   L+ WI  +    V F + GDFNR++      D  W+ ID  D 
Sbjct: 170 -GDAAKACATLMRQVPILERWIDARAAEGVRFAVLGDFNRRLARAD--DVVWREIDDADP 226

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                   +       + R    ID+ V+D  A + L  E F E+ Y      + G+R S
Sbjct: 227 PNADLSLAEGSAGPKCDPRYSEFIDHIVLDARAARDL--EGFEELTY------AAGERGS 278

Query: 294 DHCPISIDY 302
           DHCP+    
Sbjct: 279 DHCPVLARL 287


>gi|320158664|ref|YP_004191042.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
 gi|319933976|gb|ADV88839.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
          Length = 297

 Score =  162 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 67/313 (21%), Positives = 127/313 (40%), Gaps = 29/313 (9%)

Query: 2   IRKYVLALVFF-----LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + K+ L L F      L+P     AQ +   SWN+  LS      + ++   R   D+  
Sbjct: 1   MLKHALGLFFTGLVYLLLPTPLLAAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAK 58

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  Y +  ++D++  QE+    A+ KV   N   +F           +  + + +T  A+
Sbjct: 59  LAMYFQKTNSDVLAFQEVNDLAAIKKVVGTNYQILFSDRSNPRYQRFQFDDINQYTGFAI 118

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +K           L     +   +  R A  +++     +I VL++HLK+ C   S    
Sbjct: 119 KKGIPFRDVGDIQL-----NKGNSKLRFASYVIIGNTSNEIHVLNVHLKAGC---SGAYK 170

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + +C  L  ++Q L  WI+Q++ +   +++ GDFN  + Y   ND     +     +  
Sbjct: 171 GNDACRTLRLESQALGQWISQRQNNKQNYLVLGDFNHNLAYR--NDWLMNELTSAGKIHL 228

Query: 237 FPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             ++  + C        NK    +  ID+ ++ +            + L+  +D+     
Sbjct: 229 LTEDTKANCKVRSKKQPNKVHSFRSLIDHIIVSEGLS----ASQAEQKLFTSNDVLKY-- 282

Query: 291 RLSDHCPISIDYD 303
           +LSDHCP+S    
Sbjct: 283 QLSDHCPVSTTVT 295


>gi|153836873|ref|ZP_01989540.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810]
 gi|149749831|gb|EDM60576.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810]
          Length = 288

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 72/312 (23%), Positives = 134/312 (42%), Gaps = 34/312 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R   +  +      + +    + L SWNI  LS   G       V RT+ D+  L QY 
Sbjct: 1   MRSLFVTALLIFSSTSLAQ-NSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYV 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKN 120
               ADI+  QE+ S  AV K    + + I+ S     N+   + S+ + +T  AVRK  
Sbjct: 54  DKTQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDI 112

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179
                  + +         +  R A  ++V  + K ++ +L +HLK+ C   S     S 
Sbjct: 113 EVSDPADFSIT-----RDNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSR 164

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
            C  LSQQ + L  W++++++    + + GDFN  ++Y    D  W  +   +      +
Sbjct: 165 DCQTLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTR 222

Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  + C      N +K  + +  ID+ ++       +  ++  + L+   D+     +LS
Sbjct: 223 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFISQDVLDY--KLS 276

Query: 294 DHCPI--SIDYD 303
           DHCP+  ++  +
Sbjct: 277 DHCPVNATVTLN 288


>gi|260777714|ref|ZP_05886607.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605727|gb|EEX32012.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 296

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 121/307 (39%), Gaps = 24/307 (7%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           K +LA++       +  +  + + +WN+  L+         +  +R+  D+  L  +   
Sbjct: 7   KAILAILLITKSTASFASSSLTVTAWNLEWLTSHPSDKF--SESQRSKQDFQALAGHFST 64

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +D+D++  QE+    A+ KV   +    F          ++  + + +T  AV++     
Sbjct: 65  IDSDVLAFQEVNDQQALHKVIGDDYRVYFSDRASDAYMKQQFDDINQYTGFAVKEDIEVA 124

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCS 182
            +    L    D    +  R    +++  NG + I  L +HLK+ C   S     S  C 
Sbjct: 125 DKPDIQL----DQRKNSKLRFGTYIVLNPNGSQPIHALSVHLKARC---SGAYKNSRDCK 177

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           +L  Q + L  WI++++     + I GDFN  ++Y G  D  W+ I  +   +   K   
Sbjct: 178 ILKSQGKVLNQWISERERQGQNYAILGDFNHNLSYNG--DWLWEVISHSSQAVLATKGTP 235

Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           + C      N NK  + +  ID+ ++          +                  LSDHC
Sbjct: 236 ATCKVRSRKNPNKTHQFRSLIDHIIVSPGLTTAQTNQDV------FPTSLVLQHHLSDHC 289

Query: 297 PISIDYD 303
           PIS   +
Sbjct: 290 PISTQLN 296


>gi|71278943|ref|YP_268710.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
           psychrerythraea 34H]
 gi|71144683|gb|AAZ25156.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
           psychrerythraea 34H]
          Length = 301

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 49/309 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
                + A+++++ SWNI  L   E          RT +DY  L +YAK L+AD++ LQE
Sbjct: 16  FSSFKTQAEEIKVASWNIAWLGSHEY-------NHRTDADYKKLAKYAKQLNADVIALQE 68

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLG 132
           + S     KVF  + +  ++ST+  +              +A++  ++  V  + Y  L 
Sbjct: 69  VESEYWARKVFGND-YDYYFSTKDWV----------QRVGVAIKKSQHFTVEAKEYKALD 117

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS--------------LENTYS 178
                     R  +++ +  NGK + +L +HLKS CF                  E    
Sbjct: 118 VG------KVRHGMDITLTKNGKTLHLLAVHLKSGCFAAPLDSSSVKAMPSTSIKEEKRK 171

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-----GNNDDFWKTIDPND- 232
            +C+ LS+Q   L+ WI         +++ GDFNR+ +         +   W+ ++ +  
Sbjct: 172 EACTKLSKQISPLEQWIDLHASQDAAYIVLGDFNRRFSQDIALKYSEDKGLWQALNDDGK 231

Query: 233 -SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
            +L       +S C           ID+ +    A +  I+ SF ++++     K   + 
Sbjct: 232 ETLWTPTMTANSGCWGGYYKEY---IDHIIFSPKAKEKYIESSFEQLIFKPKYTKELSRN 288

Query: 292 LSDHCPISI 300
           LSDHCPIS+
Sbjct: 289 LSDHCPISV 297


>gi|254508339|ref|ZP_05120461.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16]
 gi|219548753|gb|EED25756.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16]
          Length = 295

 Score =  156 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 66/293 (22%), Positives = 126/293 (43%), Gaps = 24/293 (8%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +    + +   +WN+  LS        ++  +R   DY+ L  +  ++D+DIV  QE+ 
Sbjct: 19  FSVHAEKTLNFSTWNLEWLSSTPSDKFPQS--QRLEKDYSALAAHFSSMDSDIVAFQEVN 76

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              A+ KV  K     F +     + + + +  + +T  AVR+    + ++S  L    D
Sbjct: 77  DEKALRKVIGKQYRVFFSTRRNPEHAAHQFTAINQYTGFAVREGISVIEKESLQL----D 132

Query: 136 SFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +  R+  R A  +++   +   I  L +HLK+ C   S    ++ +C  L +Q + L  W
Sbjct: 133 TSHRSKLRFASYVVISPTSDTPIHALSVHLKARC---SGAFRHNDACRTLKRQGEALNHW 189

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NAN 248
           I +++     ++I GDFN   N     D  W+ +  + +     +E  + C      N +
Sbjct: 190 IREREAHGERYMILGDFNH--NMSYPKDWLWEIVSQDSTAKLATRETKATCKVRSRNNPS 247

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           K  + +  ID+ +               +  Y  DD+     +LSDHCPI++ 
Sbjct: 248 KTHQFRSLIDHVITSDQISV----SKIEQRNYKTDDLFRY--KLSDHCPITLT 294


>gi|90412878|ref|ZP_01220878.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK]
 gi|90326237|gb|EAS42664.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK]
          Length = 320

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 26/309 (8%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F  P    +   + + SWN+  L+  + + +     +RT +DY  L   A  LD DI+  
Sbjct: 20  FAKPNVPPLTTTLTVASWNLQWLA-SDPIIIIPPPPQRTRADYQQLAHIATQLDTDILAF 78

Query: 72  QEMGSYNAVAKVFPKNTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           QE+    A+ KV   + +   +S    E   N+ +           A+RK    V     
Sbjct: 79  QEVADRQAIEKVLTNDEYVFEFSRRQQESQHNNKRHTKPWPQFVGFAIRKGISYVRNADL 138

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             L   D       R  V++ +  +GK  + +L +HLKS C+          +C  L++Q
Sbjct: 139 HQL---DLRGNKSLRYGVDITLLNDGKAALRLLTVHLKSGCYSQQQSTKNR-ACRQLNRQ 194

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS----LIRFPKEKDS 243
            + L+ W+ ++    +PF+I GDFNR++    +ND  W+ +D        L    + + S
Sbjct: 195 FEVLEQWVDRRAAEPLPFMILGDFNRRLTL--HNDQMWQQLDDGRPTGLSLYAATEGQKS 252

Query: 244 RCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +C    +               ID+ V+D+ A + ++  SF E+  + + +K     LSD
Sbjct: 253 QCRIRIHSKHKKHRKIRHYPNFIDHIVLDERAKQKMVNNSFRELTSDVEVVK--AFNLSD 310

Query: 295 HCPISIDYD 303
           HCPI++   
Sbjct: 311 HCPITLSLS 319


>gi|261251117|ref|ZP_05943691.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891]
 gi|260937990|gb|EEX93978.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891]
          Length = 292

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 79/309 (25%), Positives = 130/309 (42%), Gaps = 25/309 (8%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M + + +  V  L+    S A  +   +WN+  LS         +  +R   DY  L  +
Sbjct: 1   MQKTWPIISVLALLGSFNSYADTL-YSAWNLEWLSSTPSSKFKPS--QRYDQDYQSLHHH 57

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
             ++++DI+  QE+    A+ KV   +    F       N   + S+ + +T  A+RK  
Sbjct: 58  FSSMESDILAFQEVNDKQALTKVIGSDYQFFFSHRSNADNQRHQFSDINQYTGFAIRKGI 117

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSP 179
                    L    D    +  R A  +++  N  + I  L +HLK+ C   S     S 
Sbjct: 118 AVKDMPDIKL----DRSPNSKLRFASYVMLHPNSQQPIHALSVHLKARC---SGAYNGSK 170

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +C  L  Q Q L  WI +++++   +VI GDFN  ++Y G  D  WK I          K
Sbjct: 171 ACRTLKVQGQQLNKWIKEREKNNDAYVILGDFNHNLSYNG--DWLWKGISQGTDATLATK 228

Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              + C      N NK  + K  ID+ ++  +        S  + LY  DD+    +++S
Sbjct: 229 MTKANCKVKSRNNPNKTHQFKSLIDHIIVSSDLG----FHSPKQNLYKVDDVL--NRQMS 282

Query: 294 DHCPISIDY 302
           DHCPIS+  
Sbjct: 283 DHCPISVSI 291


>gi|323491827|ref|ZP_08097002.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546]
 gi|323313962|gb|EGA67051.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546]
          Length = 296

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 24/308 (7%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
            +      +  L    A  A+++   +WN+  LS            +R+TSDY  L  + 
Sbjct: 5   KKWSFFTALCLLFSFHAVGAEQISFSTWNLEWLSSSPSSKF--EQSQRSTSDYQALNHHF 62

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            N+ +D+V  QE+   +A+ KV   +    F       N   +  + + +T  AVR    
Sbjct: 63  SNMQSDVVAFQEVNDADALVKVIGNDYQLFFSQRSESDNRRHQFDDINQYTGFAVRNGIA 122

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPS 180
              ++   L    D+ S +  R A  +++  +GK  +  L +HLK+ C   S     S  
Sbjct: 123 VSNKRDLRL----DNSSNSKMRFASYIIIRPSGKQPVHALSVHLKARC---SGRFNSSRD 175

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           C +L QQ + L  WI Q++ +   ++I GDFN  + Y    D  W  I  +       K 
Sbjct: 176 CKILKQQGRALNGWIKQREAAKDAYIILGDFNHNMGYQ--RDWLWDEIAQDTQATLVSKS 233

Query: 241 KDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             + C      N  K  + +  ID+ ++ ++           + +Y  +D+     +LSD
Sbjct: 234 TKAECKVRSRNNPRKTHQFRSLIDHIIVSESL----TASKPKQDVYPVEDVL--NHQLSD 287

Query: 295 HCPISIDY 302
           HCP+S D 
Sbjct: 288 HCPLSSDI 295


>gi|258541736|ref|YP_003187169.1| hypothetical protein APA01_06400 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256632814|dbj|BAH98789.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256635871|dbj|BAI01840.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256638926|dbj|BAI04888.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256641980|dbj|BAI07935.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256645035|dbj|BAI10983.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256648090|dbj|BAI14031.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256651143|dbj|BAI17077.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654134|dbj|BAI20061.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 321

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 76/308 (24%), Positives = 130/308 (42%), Gaps = 32/308 (10%)

Query: 4   KYVLALVFFLVPC----TASVAQKVRLVSWNINTL---SEQEGVSLWKNSVKRTTSDYTL 56
            +  + +  +  C    +A+ A  ++L +WN++ L   +         +   RT++D + 
Sbjct: 26  SFFFSALVLVACCLSFTSATAADTLKLSTWNLDWLLDPAHPGYAQAPPDIPHRTSADISS 85

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  YA +L  D+V LQE+ S     ++FP   + +  S +              HTA+AV
Sbjct: 86  LASYAAHLHGDVVALQEIESPAGAGQLFPFARYHLAISQDH----------ILQHTALAV 135

Query: 117 RKKNVRVLQQSYPLLG--AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           R             L   A    +    R  +++ +  NG+ + +L +HLK+ C  D+L 
Sbjct: 136 RADIPFEQNPDVTALDAYATAPTTHHHLRSGLDITLHQNGQALRILVVHLKAGC-PDNLP 194

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
           +   P+C+ L QQ   L DW+  + +    F I GDFNR +     +D  + T+     L
Sbjct: 195 HASRPACTTLWQQFAALDDWVATRTQHHEAFAIMGDFNRHLT---VHDPLFLTLLRIAPL 251

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                   S C           ID+ ++   A  + +  S   I   E+     G+ LSD
Sbjct: 252 DLATAGMASPCQGGSYF-----IDHIILGGAARAWKVPNSLRVIPLAEET----GQNLSD 302

Query: 295 HCPISIDY 302
           HCP+SI  
Sbjct: 303 HCPVSISL 310


>gi|114798114|ref|YP_760171.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
           neptunium ATCC 15444]
 gi|114738288|gb|ABI76413.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
           neptunium ATCC 15444]
          Length = 442

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 73/313 (23%), Positives = 113/313 (36%), Gaps = 35/313 (11%)

Query: 3   RKYVLALVFFLVPCTASV-------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           R  VLA    +  C           A  +R+ +WN   L+   G   +     R  +   
Sbjct: 150 RILVLATALLVSACQTPAPPPADQEAGPLRIAAWNTEHLTAVSGAGCFP----RDEAALD 205

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPK------NTWCIFYSTERLINHSKRDSNND 109
           L+  Y   +DADI  LQE+    A+A+VF               +               
Sbjct: 206 LIADYITRVDADIWLLQEVDGDGALARVFGDGWTFHVEQRAGGETYPLCRGRDDGTRLRA 265

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
            +TAIAVR           P L A D       R  V + +        ++ +HL S CF
Sbjct: 266 QNTAIAVRDGI---THDRLPDLAALDLTGEGRTRYGVAITL-PGPVPTDIMSVHLTSGCF 321

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                      C  L  QA  L+ WI Q+  +    ++ GDFNR++     +D  W  ++
Sbjct: 322 SGDTSVR----CPALFDQADVLEAWIDQRSAAGRAVIVGGDFNRRL--EAEDDPVWTGLN 375

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                        +    + + R +  ID+ ++   A   ++  SF E  Y+        
Sbjct: 376 DGTPAGL--HIAGAGTGPSCDPRYREFIDFLLLSDTALTRMVAGSFRETTYDTP------ 427

Query: 290 KRLSDHCPISIDY 302
            R SDHCPIS+  
Sbjct: 428 ARPSDHCPISLSI 440


>gi|109896633|ref|YP_659888.1| endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica
           T6c]
 gi|109698914|gb|ABG38834.1| Endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica
           T6c]
          Length = 331

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 22/287 (7%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            S     ++V+WN    +             RT+ D   ++ Y   L A ++ LQE+ S 
Sbjct: 60  TSGMDGFKVVTWNTEHFA----YPSNAGCKPRTSEDIAAIKAYIAGLGASVIALQEVASR 115

Query: 78  NAVAKVFPKNTWCIFYSTERLIN----HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            A+  VFP++ W +  S               ++     A A++K    +  Q    LG 
Sbjct: 116 EALRLVFPESDWTLVLSARADSPAYECRESGFTSTQQKVAFAIKKGISILQVQQNAQLGL 175

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           +    + G R  + + V+       +L++HLKS CF+D    +   +C  L+QQ   L++
Sbjct: 176 Q----KIGLRFGLAVTVDTPLGPTDILNVHLKSGCFVDDYATSDKAACQTLAQQVPVLEE 231

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           W+   +   VP+++ GDFN ++     N+     +  ++  I    +    C+     R 
Sbjct: 232 WLAAHQTLGVPYMVLGDFNHRLAS--ENNYLASRLTSDEYGIDIATQALRGCHP----RY 285

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             PID+ ++       LI  S     Y           LSDHC +S+
Sbjct: 286 PEPIDHILL-GGMQSTLIAASAHVHRYKN---MDEEAMLSDHCAVSL 328


>gi|114328405|ref|YP_745562.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis
           CGDNIH1]
 gi|114316579|gb|ABI62639.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis
           CGDNIH1]
          Length = 358

 Score =  152 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 132/319 (41%), Gaps = 47/319 (14%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
             P T  +A  +++ +WN++ L+E     +L  ++  RT  D + L  YA  LDADI+ +
Sbjct: 52  ASPVTTPLAGGLKIATWNLDWLTEPGSEATLPPDAPHRTEKDISRLSHYATLLDADIIAV 111

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ S + + ++FP + + I  S +++                AVR+  +         L
Sbjct: 112 QEVASPDILRRLFPPDRYVIHLSGDKVA----------QRVGFAVRRGLMVTANPDLSGL 161

Query: 132 GAKDSFSRAGNRRAVELLVEIN----GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 +    R   ++ V++     G ++ +L +HLK+ C  D+   +  P+C+ L  Q
Sbjct: 162 DVYGPHAAHHLRSGADITVDLPASSGGGRLRLLAVHLKAGCRRDAFAKSLRPACATLQAQ 221

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L  WI ++K+  VPF+I GDFNR ++     DD  + ++    L      +   C+ 
Sbjct: 222 TIPLTGWIAERKQEGVPFLILGDFNRWLH---PGDDVLQKMEQVAPLTLLTVNRRDPCHH 278

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI---------------------- 285
             +      ID+ +    A  ++  ES   + Y                           
Sbjct: 279 GASF-----IDHILAGGVARSWIDPESLRVMTYGPATTSKPEGQAMRYQLPWTRMPPGKL 333

Query: 286 --KSRGKRLSDHCPISIDY 302
                   LSDHCP+SI  
Sbjct: 334 IQPDSSDGLSDHCPVSIRL 352


>gi|330993334|ref|ZP_08317269.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1]
 gi|329759364|gb|EGG75873.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1]
          Length = 283

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 22/299 (7%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           L ++  L+P TA   + +RL +WN+  L    Q   +L  +   RT  +   L  YA+ L
Sbjct: 3   LPVITGLLPATAGAREDIRLSTWNLEWLTTRPQGDPALPADVTPRTVVELEHLAAYARRL 62

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
             DI  L+E+ S    A++FP   + IF + + ++             A+AVR +     
Sbjct: 63  APDIAALEEVDSPALAARLFPAPAYRIFITHDTVV----------QKVALAVRAELAVTR 112

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
                 L      +    R  +++ +      + VL +HLK+ C  DS  ++  P+C  L
Sbjct: 113 HADVTALDVYAPDAPHHLRAGLDVSIGTGADSLRVLVVHLKAGCR-DSAPDSRRPACRTL 171

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            +Q   + DWI ++++    F + GDFNR +     +D  + T+  +  L      + S 
Sbjct: 172 LRQIAIVADWILERQDEGEAFAVLGDFNRLLA---PDDPAFHTLAASGPLALVTAGRASP 228

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           C           ID+ ++   AY  +  +S   +LY+ED   +   RLSDHCP+S++  
Sbjct: 229 CAQGSYF-----IDHILVGGPAYARVRPDSLRVMLYHEDSG-TEASRLSDHCPVSVNLS 281


>gi|312883334|ref|ZP_07743060.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368950|gb|EFP96476.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 303

 Score =  150 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 68/312 (21%), Positives = 130/312 (41%), Gaps = 25/312 (8%)

Query: 1   MIRKY-VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           M RK  VL  +F  +    S A+ +R  +WN+  L+  +   L   S  R  SD  LLR+
Sbjct: 1   MPRKIKVLFYLFVGLIACESQAEVIRYTTWNLQWLATPQHGKLI--SPNRGGSDLRLLRK 58

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           Y     ADI+  QE+   + ++KV   +   I     +  N   + S+ + +T  AV+K 
Sbjct: 59  YFIKTSADIMAFQEVNDVSIISKVVGSDYKVILSQRSKAENQIHQFSDINQYTGFAVKKS 118

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYS 178
                 +   L    D   ++  R A  + +     + + +L +HLK+ C  +       
Sbjct: 119 FKVRDHKDIQL----DKRLKSRLRFASYIELTTPSKQSVHLLSVHLKAGCRKN---YQEK 171

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            +C +L +Q   +  WI ++++    +++ GDFN +I         W  I      +   
Sbjct: 172 RNCRILKEQLININSWIREREKYQHDYIVLGDFNSQI--ADEAKWAWYLISKKTQAVLTS 229

Query: 239 KEKDSRCNANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +   ++C            + K  ID+ ++  +        +  ++ +   D++     L
Sbjct: 230 QNTTAQCYVRSKTKRASVFKYKSIIDHIIVSSSH----TFTTAKQLPFKTKDVRQYE--L 283

Query: 293 SDHCPISIDYDF 304
           SDHCP+ I+  +
Sbjct: 284 SDHCPVIIEASY 295


>gi|260773808|ref|ZP_05882723.1| hypothetical protein VIB_002285 [Vibrio metschnikovii CIP 69.14]
 gi|260610769|gb|EEX35973.1| hypothetical protein VIB_002285 [Vibrio metschnikovii CIP 69.14]
          Length = 299

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 29/310 (9%)

Query: 1   MIRKYV--LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           MI +++  L L   L+      AQ + + +WNI  L+         +  KR+ +D+  L 
Sbjct: 1   MITRFLSRLTLCVVLLSSFCGYAQPISITTWNIEWLTLNPDA--PDDKGKRSEADFQALS 58

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVR 117
           ++ +    D++  QE+ S  A+ KV   N + I  S   +  H   + S  + +T  A++
Sbjct: 59  RHFQRFRPDVLAFQEVDSIAAIQKVVG-NEYRIVLSERAMPQHQQHQFSKLNQYTGFAIK 117

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT 176
                       L G     +    R A  +++  +   +I +L +HLK+ C      + 
Sbjct: 118 STIPFDTPADIDLYG----RANHKLRFATYVILYPDNPNEIHLLSVHLKAGCAG--AFHP 171

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSL 234
            + SC +L  Q + L  W+ +++     F+I GDFN  + Y G  D  WK I+   N  +
Sbjct: 172 NTDSCQILKTQGKALNRWLQERERHQHAFMILGDFNHNLAYQG--DWLWKIINQELNKPV 229

Query: 235 IRFPKEKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
               +E  +RC        +   R +  ID+ ++       ++ +   +I++  D++   
Sbjct: 230 QLATQETPARCQVRSRRQPDTLHRFRSLIDHMIVS----SQVVYQQIQQIVFPADEVLRY 285

Query: 289 GKRLSDHCPI 298
             RLSDHCPI
Sbjct: 286 --RLSDHCPI 293


>gi|163804004|ref|ZP_02197820.1| hypothetical protein 1103602000450_AND4_08521 [Vibrio sp. AND4]
 gi|159172186|gb|EDP57103.1| hypothetical protein AND4_08521 [Vibrio sp. AND4]
          Length = 261

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 113/283 (39%), Gaps = 29/283 (10%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT 88
           WN+  LS      L      RT+ D+  L  Y     ADI+  QE+ S  A+ K    + 
Sbjct: 1   WNMEWLSIDGSKVL------RTSQDFEKLSYYMAKTQADILAFQEVESITAIQKAVGNDF 54

Query: 89  WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                          + ++ + +T  AVR     + +          +   +  R A  L
Sbjct: 55  TIYLSDRSNSSYRHLQFNDTNQYTGFAVRNGVNVLDK-----PDFSITRGNSKLRFASYL 109

Query: 149 LVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           ++  N   +I +L +HLK+ C         +  C ++ QQ Q L  W+  ++++   +V+
Sbjct: 110 VLNPNQDNEIHLLSVHLKAGCSGT---YRNNRDCKIVKQQGQALAKWMKAREDNKQHYVV 166

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIPIDYFV 261
            GDFN  + Y G  D  W+ +  +       K+  ++C      N NK  + +  ID+ +
Sbjct: 167 LGDFNHNLGYRG--DWLWRVLSDDTDAKLMTKDTQAQCKVRSNRNPNKTHQFRSMIDHII 224

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +              + ++   D+     +LSDHCP+S    F
Sbjct: 225 VSGQLM----ASPSVQTVFKTQDVLDY--KLSDHCPVSSVLSF 261


>gi|54309887|ref|YP_130907.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9]
 gi|46914326|emb|CAG21105.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9]
          Length = 319

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 74/327 (22%), Positives = 135/327 (41%), Gaps = 35/327 (10%)

Query: 3   RKYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
            +++  L         + +           + + SWN+  LS  + + +     +RT  D
Sbjct: 1   MQWLFPLFLISALTLVNGSFSKPNIHTVNTLTIASWNLQWLS-SDPIVIKNPPPQRTHVD 59

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER---LINHSKRDSNNDI 110
           Y  L   A  LDADI+  QE+    A++KV   + +   +S  +     +  +       
Sbjct: 60  YQQLANIATQLDADILAFQEVADRQAISKVLTNDEYIFEFSHRQRESQHSDKRYAQPWPQ 119

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCF 169
               A+R+    V       L   D +     R  V++ +  +G   + +L +HLKS C+
Sbjct: 120 FVGFAIREGISYVRNADLQQL---DLWGNKSLRYGVDITLLNDGNPALRLLTVHLKSGCY 176

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                     +C  L++Q + L+ W+ ++    +PF+I GDFNR++    +ND  W+ +D
Sbjct: 177 SQQQSTKNR-ACRHLNRQFEVLEQWVDRRAAEPLPFMILGDFNRRLAL--HNDKIWQQLD 233

Query: 230 PNDS----LIRFPKEKDSRCN---------ANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                   L    + + S+C            +       ID+ V+D  A   +I  SF 
Sbjct: 234 DGRPTGLSLYAATEGQKSQCRIKIHSKRKKHGQIRHYPNFIDHIVLDGRAKLKMINNSFR 293

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
           E   + + +K     LSDHCPI++  +
Sbjct: 294 ETTTDVEVVK--AFNLSDHCPIALSLN 318


>gi|149190193|ref|ZP_01868468.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1]
 gi|148835940|gb|EDL52902.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1]
          Length = 301

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 37/317 (11%)

Query: 1   MIR-----KYVLALVF-FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M R     K++ +LV    +  T   A      +WNI  L+          + +R   D+
Sbjct: 5   MKRTLSYYKWLFSLVIGISLFPTLVSATTFT--TWNIEWLTLNPSSKF--EASQRGKDDF 60

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTA 113
             L +  + L   ++  QE+ S  A+ K+   + + I+ S   L +    + S  + +T 
Sbjct: 61  LALARQFEVLSPSVLAFQEVDSQEAIRKIVGND-YDIYLSDRALPSSKQHQFSAINQYTG 119

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            AV+K         +PL            R A  + + ++ K I +L +HLK+ C   S 
Sbjct: 120 FAVKKGLSIKDAADFPLSTGS------KLRFASAIKLNVDNKTINLLSVHLKAGC---SG 170

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +     SC  L +Q + +  W+ Q ++    +++ GDFN  + Y G  D  WKTI     
Sbjct: 171 KFVNQNSCHTLKKQGKVINSWLKQVEQQNELYIVLGDFNHNLAYSG--DWLWKTITNGLD 228

Query: 234 L--IRFPKEKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                  ++  + C      N +K  + +  ID+ ++              + L   +D+
Sbjct: 229 TAPRLTSQQTKATCKVKSRKNNDKIHQFRSLIDHIIVSPELR----TSPAVQSLMPVEDV 284

Query: 286 KSRGKRLSDHCPISIDY 302
                ++SDHCP+SI+ 
Sbjct: 285 LK--HQMSDHCPLSIEL 299


>gi|90578074|ref|ZP_01233885.1| hypothetical protein VAS14_13524 [Vibrio angustum S14]
 gi|90441160|gb|EAS66340.1| hypothetical protein VAS14_13524 [Vibrio angustum S14]
          Length = 287

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 29/294 (9%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +SWN+  LSEQ+        VKRT  DYT+L+Q     + DI+  QE+ S  ++ ++ P 
Sbjct: 1   MSWNLQWLSEQQQE------VKRTEQDYTMLKQVFLTYEPDILAFQEVDSAASLQRIVPN 54

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVR-----KKNVRVLQQSYPLLG-AKDSFSRA 140
           + + IF S+ R+ N     +  +  T  AV+     KK+  +   S P L   +  + + 
Sbjct: 55  DQYQIFMSS-RIKNKEDIFNGVNQFTGFAVKNYLTVKKHPDITTLSSPALALGEKQYYQQ 113

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             R    + V +N   I V+++HLKS CF    L+N    SC  L+ Q   L+ WI Q++
Sbjct: 114 KLRYGSAITVSLNQHDIIVVNVHLKSGCFTPKQLKNNRKKSCRTLNFQRTLLQQWIKQQQ 173

Query: 200 ESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIRFPKEKDSRCNAN-------KN 250
            +  PF++ GDFN  I +   N+   F+ + +    L          C            
Sbjct: 174 INKQPFILVGDFNHHIAFKTTNNATNFFSSNNKQGPLKWLTNNVKGNCLTKKIKNKKVYY 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              K  ID+    ++        S  ++ Y+++ + +   +LSDHCP+     F
Sbjct: 234 RHYKELIDHGFSSEHFNI----TSVQQLPYSKEQVSTY--QLSDHCPVIFSLSF 281


>gi|88860700|ref|ZP_01135337.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2]
 gi|88817295|gb|EAR27113.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2]
          Length = 316

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 19/289 (6%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A     +   +WN+  L+             R+ S+   ++ YA +LDADI+ LQE+ S 
Sbjct: 40  APSINALSFATWNMEHLA----YPADTGCKPRSKSEIAAMQAYAASLDADIIALQEVASV 95

Query: 78  NAVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            A+A+VFP++ W I  S              +++     A AVRK    +    Y  L  
Sbjct: 96  KAIAQVFPEDQWQIIISKRADSEVYSCRESGNTSTQQKVAFAVRKSIPVLNTHHYDELAL 155

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             +    G R  + + V+       VL++HLKS CF+D  E +   +C   ++QA WL  
Sbjct: 156 GLN----GLRYGLSVTVDTADGATEVLNVHLKSGCFVDDYEKSDRKACPTFAKQAVWLDK 211

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           W  +K+ S  P+++ GDFN ++     N+   + +  N +      +  ++   + + R 
Sbjct: 212 WFERKEASKQPYIVMGDFNHRLATD--NNRLMQELANNSNGAASTLKHITQNVVSCHPRY 269

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             PID+       +   I  +     + +   KS    LSDHC ++   
Sbjct: 270 PAPIDHQFAGG--FSQAIPTNVQMRYFAD---KSETAMLSDHCAVTFTL 313


>gi|221134816|ref|ZP_03561119.1| endonuclease/exonuclease/phosphatase [Glaciecola sp. HTCC2999]
          Length = 321

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 22/292 (7%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +    ++ + +WN+  L+      +      RT SD   +R+Y  N+DAD+  LQE+ S 
Sbjct: 45  SFEPSQLTVATWNVEHLA----YPINTGCKPRTESDINAMREYVNNVDADVFALQEVASE 100

Query: 78  NAVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            AV  +FP +TW +  S                +     A AV+        +    LG 
Sbjct: 101 QAVRLLFPTDTWQVLMSPRPDSETYECRGSGRESTQQKIAYAVKNGININSVKGLSELG- 159

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
               +  G R  +EL ++     I +L++H+KS CF+D+   +   SC   +QQA  L  
Sbjct: 160 ---LNNPGLRYGLELTIQSELGAIKLLNVHMKSGCFVDNYSRSDRESCQTFAQQAPILDA 216

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           W+  ++   + +V+ GDFN +++   N+         D ++S +     +   C+     
Sbjct: 217 WVETQESEDIQYVLLGDFNHRLSAPYNHLTRQLMTNSDGSESTLYNTTGQLIGCHPY--- 273

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               PID   +   +              +  +  +    LSDHC +S+  +
Sbjct: 274 -YPAPIDLVFVGGMSDNKYD----YTYQAHTFNNMAPKAMLSDHCAVSLQIE 320


>gi|197337596|ref|YP_002157871.1| metal-dependent hydrolase [Vibrio fischeri MJ11]
 gi|197314848|gb|ACH64297.1| metal-dependent hydrolase [Vibrio fischeri MJ11]
          Length = 323

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 67/314 (21%), Positives = 129/314 (41%), Gaps = 29/314 (9%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M ++    L+F ++  +   +  + L +WN+  L+          S  R+  D+  L  Y
Sbjct: 27  MNQRITRTLIFLMLTFSTFSSYAITLSTWNMEWLTLSPSEKF--RSSDRSQQDFEQLNFY 84

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               ++ I+  QE+ S  A+ ++   + + I+ S  R +N   + ++ + +T  AV +  
Sbjct: 85  FSQSNSKILAFQEVDSKEAIQRIVGND-YKIYLSD-RSLNSKLQFTDINQYTGFAVHQSI 142

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYS 178
             +    + LL  K +   +  R A  ++ +I    + + +L +HLKS C         +
Sbjct: 143 PVIDPNDFSLLPKKKT---SKLRYATYIVADIGNPSRPVHLLSVHLKSGCLGQ---KKKN 196

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI--R 236
            SCS L QQ   + +WI  ++ +   ++I GDFN  + +       WK I  N S     
Sbjct: 197 YSCSTLKQQTDEVIEWINSREANNEEYLILGDFNHTLAH--PRSWLWKNIKSNTSDTPLL 254

Query: 237 FPKEKDSRC----NANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
             ++  +RC          +       ID+          +   SF        +   + 
Sbjct: 255 LTEDTKARCTVKQWKRDWPKYTTFTRLIDH------GITNISNRSFQVTQQQFTEADVKK 308

Query: 290 KRLSDHCPISIDYD 303
            +LSDHCPI  + +
Sbjct: 309 YQLSDHCPILFEMN 322


>gi|59713463|ref|YP_206238.1| hypothetical protein VF_A0280 [Vibrio fischeri ES114]
 gi|59481711|gb|AAW87350.1| hypothetical protein VF_A0280 [Vibrio fischeri ES114]
          Length = 323

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/312 (20%), Positives = 130/312 (41%), Gaps = 25/312 (8%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M ++    L+F ++  +   +  + L +WN+  L+          S  R+  D+  L  Y
Sbjct: 27  MNQRITRTLIFLMLTFSTFSSYAITLSTWNMEWLTLSPSEKF--RSSDRSQQDFEQLNFY 84

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               ++ I+  QE+ S  A+ K+   + + IF S  R +N   + ++ + +T  AV +  
Sbjct: 85  FSQSNSKILAFQEVDSKEAIQKIVGND-YKIFISD-RSLNSKLQFTDINQYTGFAVHQSI 142

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYS 178
             +    + LL  K +   +  R A  ++ +I    + + +L +HLKS C         +
Sbjct: 143 PVIDPNDFSLLPKKKT---SKLRYATYIVADIGKPSRPVHLLSVHLKSGCLGQ---KKKN 196

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            SCS L QQ   + +WI  ++ +   ++I GDFN  + +  +        + +D+ +   
Sbjct: 197 YSCSTLKQQTDEVIEWINSREANNEEYLILGDFNHTLAHPRSWLWKNIKNNTSDTPLLLT 256

Query: 239 KEKDSRC----NANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           ++  +RC          +       ID+          +   SF        +   +  +
Sbjct: 257 EDTKARCTVKQWKRDWPKYTTFTRLIDH------GITNISNRSFQVTQQQFIESDVKKYQ 310

Query: 292 LSDHCPISIDYD 303
           LSDHCPI  + +
Sbjct: 311 LSDHCPILFEMN 322


>gi|209809561|ref|YP_002265100.1| membrane protein [Aliivibrio salmonicida LFI1238]
 gi|208011124|emb|CAQ81546.1| membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 321

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 27/311 (8%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M ++    L F+++  ++  +  V L +WN+  L+         +  +R   D+  L  Y
Sbjct: 27  MNQRITRLLSFYMLIFSSFSSYAVTLSTWNMEWLTLNPSEKFKPS--ERNEYDFRSLNNY 84

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               ++ I+  QE+ S  A+ KV   N + I+ S  R  N  K+ ++ + +T  AV    
Sbjct: 85  FIKSNSQILAFQEVDSAEAIQKVVG-NEYKIYLSD-RSSNPKKQFNDINQYTGFAVHNSI 142

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  + LL  K +   +  R A  ++  +N K + +L +HLKS CF        + +
Sbjct: 143 SVTDPDDFSLLPDKKT---SKLRYAAYIIATVNEKPLHLLSVHLKSGCFGQ---KKKNYA 196

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI--RFP 238
           CS L QQ + + DWI ++ E    ++I GDFN  + +       WK I            
Sbjct: 197 CSTLEQQTEEVIDWINERNEKKQDYLILGDFNHTLAH--PRSWVWKEIQKGTPQDPYLLT 254

Query: 239 KEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           ++    C   +  RN          ID+      +   L +    ++LY+++D+K    +
Sbjct: 255 EDTKGNCTVKQWKRNWPKYTTFTRLIDH----GISNLSLKKVEVEQLLYDQNDVKK--FQ 308

Query: 292 LSDHCPISIDY 302
           L+DHCPI    
Sbjct: 309 LTDHCPIIFKI 319


>gi|262195540|ref|YP_003266749.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
 gi|262078887|gb|ACY14856.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
          Length = 406

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 38/291 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + L +WN++ L+ ++G      +  RT +DY  LR YA  LDAD++ LQE+    A  
Sbjct: 41  GDIELATWNLSWLASEDGA----GTNPRTEADYARLRTYAARLDADVIALQEVADEFAAR 96

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +VF    +    +++R              +  A ++            L         G
Sbjct: 97  RVFDPTVYDFAIASKR----------GAQRSGFAYKRDLRVRRHADLAALDVG------G 140

Query: 142 NRRAVELLVEINGK------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            R  V++ +++         ++ +L +HLKS CF DSL    S +C  LS+Q   L+ WI
Sbjct: 141 LRPGVDIELDLGRGADGTPRRLRLLALHLKSGCFDDSL-RKRSNACRKLSRQLPQLEGWI 199

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL----IRFPKEKDSRCNANKNL 251
             +    VPF + GDFNR++N     D  W+ ID  +          + + SRC   K  
Sbjct: 200 DARAREGVPFAVLGDFNRRMNA---RDALWREIDDAEPAAADLTLVTEGQRSRCWKGKYP 256

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           R    ID+  +D +A  +L+  SF +++Y++ D  +  + LSDHCPIS+  
Sbjct: 257 RF---IDHIALDLHASAWLVPNSFEQLVYSDSDT-AHARALSDHCPISVRL 303


>gi|317495840|ref|ZP_07954203.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424]
 gi|316914017|gb|EFV35500.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424]
          Length = 696

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 97/329 (29%), Gaps = 58/329 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76
               K+ + S+NI   S                     +   + K     DI+ L E+  
Sbjct: 312 PSEDKLTIASYNIENFSANNNGHDETP-----EEKVDKIANSFIKEVHSPDIITLIEVQD 366

Query: 77  YNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     K      +  +     +          +I  A     
Sbjct: 367 NNGGVNDGTVDGVKSGEKLAQRIKQLGGPEYK-YTEIAPVDGKDGGKPGANIRVAYLYNP 425

Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           K V ++ +                   P      +      R+++    E  G++I V+ 
Sbjct: 426 KRVTLVGKDKGGSEEAARFVNGHLEKNPARIDPTNVHFDKVRKSLAAEFEFKGERIVVIA 485

Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            HLKS    D++  +  PS         ++A+ L  +I +  ++   + FV+ GDFN   
Sbjct: 486 NHLKSKIGDDAIYGSNQPSVENTKSKRIEEAKILNAFIKEGLRQNPNLKFVLTGDFNDFE 545

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                     KTI  N+ +    +       +     +   +D  ++ +N    ++    
Sbjct: 546 FSDSV-----KTIVGNELVNLMAEHDAGDRYSYFYRGSNQSLDNILVSKNIKDKVVFSPV 600

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          R SDH P+ +  DF
Sbjct: 601 HI----NASFMEEHGRASDHDPVVVQIDF 625


>gi|330448573|ref|ZP_08312221.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492764|dbj|GAA06718.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 283

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 26/291 (8%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           ++WN   L++     +     +RT  DY  LRQ       D++  QE+ S  ++ +V PK
Sbjct: 1   MTWNFQWLADHPKSDI-----QRTAKDYQALRQIFLTHQPDVLAFQEVNSAKSLYRVIPK 55

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK------DSFSRA 140
           + + +F S+ R I+   + +  +  T  AV+K            L +        S  + 
Sbjct: 56  DQYQVFMSS-RTISEDDKFNGINQFTGFAVKKPIYAKQLNDISELSSPAASLGLTSHYQQ 114

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             R    + ++++   I + ++HLKS CF    L +    +C  L+ Q + ++ W+  ++
Sbjct: 115 KLRYGAVISIKLDDNAITIANLHLKSGCFYPKQLSHNKKKACRTLNLQRKIVQQWVNNQQ 174

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-------NANKNLR 252
              VPF++ GDFN +I+   + D+ + +   N  L    +  +  C       N     +
Sbjct: 175 TKQVPFIVVGDFNHRIHQPPSIDNGFISSSANKPLKWLSQNINGSCLAKVTKNNRVYYRQ 234

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            K  ID+           I  S  +I + +  +     +LSDHCP+  +  
Sbjct: 235 YKQLIDHGFSS----VHFILNSAQQIQFAKHQV--EQYQLSDHCPLLFNLT 279


>gi|329770281|ref|ZP_08261669.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325]
 gi|328836839|gb|EGF86487.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325]
          Length = 719

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 102/329 (31%), Gaps = 58/329 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76
               K+ + S+NI   S        K   +        + + +       DI+ L E+  
Sbjct: 321 PAEDKLTIASYNIENFSANS-----KGRDETPEEKVDKIAKSFINEVHSPDIITLIEVQD 375

Query: 77  YN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     K F    +  +     +          +I  A     
Sbjct: 376 NNGGVNDGTVEGVKSGEKLADRIKSFGGPEYK-YTEVAPIDGKDGGKPGANIRVAYLYNP 434

Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
             V ++ +                   P      + +    R+++    +  G++I V+ 
Sbjct: 435 NRVTLIGKDKGGSEEAARFVDGHLEKNPARIDPTNINFEKVRKSLAAEFDFKGERIVVIA 494

Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GDFN   
Sbjct: 495 NHLKSKLGDDAVYGSNQPAIENTKAQRVEQAKLLNAFVREGLRQNPNLKFVLTGDFNDF- 553

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                  D  KTI  N+ +    + +     +     +   +D  ++ +N    ++    
Sbjct: 554 ----EFSDTVKTIVGNELVNLMAEHEAGDRYSYFYRGSNQSLDNILVSKNIKDRVLFSPV 609

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          R SDH P+ +  DF
Sbjct: 610 HI----NASFMEEHGRASDHDPVVVQIDF 634


>gi|125718549|ref|YP_001035682.1| extracellular nuclease [Streptococcus sanguinis SK36]
 gi|125498466|gb|ABN45132.1| Extracellular nuclease, putative [Streptococcus sanguinis SK36]
          Length = 749

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTVASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P      + +    R+++    E  G+ 
Sbjct: 461 FLYNPNRVKLVEKDAGNSDEAASFSGGHLVKNPARIEPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|315221940|ref|ZP_07863851.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           anginosus F0211]
 gi|315188906|gb|EFU22610.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           anginosus F0211]
          Length = 736

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 99/329 (30%), Gaps = 59/329 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76
               K+ + S+NI   S         +      +    + + +       DI+ L E+  
Sbjct: 357 PSEDKLTIASYNIENFSANNATGETPD------AKVEKIAKSFINEIHSPDIITLIEVQD 410

Query: 77  YN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                  A  K      +        +         ++I  A     
Sbjct: 411 NNGSVNDGTVSGVESGEKLAAKIKQLGGKEYKYVEVA-PVDGADGGKPGSNIRVAFLYNP 469

Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           + V+++++                   P      +      R+++    E  G++I V+ 
Sbjct: 470 QRVKLVEREAGSSTETAAFKDGHLVKNPARIDPANPVFEKVRKSLAAEFEFKGERIVVIA 529

Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            HLKS    D++  +  P+         +QA+ L  ++ +  K+   + FV+ GDFN   
Sbjct: 530 NHLKSKLGDDAVYGSKQPAVQNTLAQRIEQAKLLNAFVKEGLKQNPNLKFVLTGDFNDF- 588

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                  +  K +  N+ +        +   +     +   +D   + +N     +    
Sbjct: 589 ----EFSETAKAVAGNELVNMMLNHDAADRYSYFYRGSNQSLDNIFVSKNIADKTVFSPV 644

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          R SDH P+    DF
Sbjct: 645 HI----NASFMEEHGRASDHDPVIAQLDF 669


>gi|225166446|ref|ZP_03728100.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2]
 gi|224799314|gb|EEG17887.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2]
          Length = 313

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/325 (15%), Positives = 112/325 (34%), Gaps = 39/325 (12%)

Query: 3   RKYVLALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-- 58
           RK +LA +F  V C         + + +WNI            K        +   +   
Sbjct: 4   RKSILAAIFVFVACVVFADTKDTLTVATWNIRNYLPVNRRIDGKFRPDYPKPEAEKIALR 63

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              + +DAD++ LQEMGS   +A++          S   +  H+   +  D    +AV  
Sbjct: 64  AVIRQIDADVIALQEMGSGGHLAEL-----QRDLESEGCVYPHAHVLAGADPVRQLAVLS 118

Query: 119 KNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEING----------KKIWVLDIHLKSF 167
           +      + +  +       R   +R  +E+ VE  G          +++ +  +HLKS 
Sbjct: 119 RLPLREVREHSDMDFAYRDGRTPVSRGLLEVSVEAPGAESGEGLSTNRRVTLFVLHLKSR 178

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYLGN 220
               +       S +  +++A+ +++ + Q+  +          F+IAGD N  ++    
Sbjct: 179 L---TTFPDDPESATWRAKEAEAIRNRVLQRFPNPAATGGGGGRFLIAGDCNDVVSSRPI 235

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                +       L+     +     +          +D  ++       +++    +  
Sbjct: 236 RALLKRGNTEIARLLPATDSRGETWTHYYAREETYSRVDNILVSPALAAAVVRMWVVDSP 295

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
                        SDH P++++  +
Sbjct: 296 GV--------LVASDHRPVAVELRW 312


>gi|327470461|gb|EGF15917.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK330]
          Length = 749

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P      + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKDAGNSDEAASFSGGHLVKNPARIEPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|329767831|ref|ZP_08259347.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341]
 gi|328838932|gb|EGF88526.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341]
          Length = 748

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 97/329 (29%), Gaps = 58/329 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76
               K+ + S+NI   S                     +   + K     DI+ L E+  
Sbjct: 322 PSEDKLTIASYNIENFSANNSGHDETP-----EEKVDKIANSFIKEVHSPDIITLIEVQD 376

Query: 77  YNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     K      +  +     +          +I  A     
Sbjct: 377 NNGGVNDGTVDGVKSGEKLAQRIKSLGGPDYK-YTEIAPVDGKDGGKPGANIRVAYLYNP 435

Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
             V ++ +                   P      S      R+++    +  G++I V+ 
Sbjct: 436 NRVTLIGKEKGGSEEAARFVNGHLEKNPSRVDPTSVHFEKVRKSLAAEFDFKGERIVVIA 495

Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            HLKS    D++  +  PS         ++A+ L  +I +  ++   + FV+ GDFN   
Sbjct: 496 NHLKSKLGDDAIYGSNQPSVENTRPKRIEEAKILNAFIKEGLRQNPNLKFVLTGDFNDFE 555

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                     KTI  N+ +    + +     +     +   +D  ++ +N    ++    
Sbjct: 556 FSDSV-----KTIVGNELVNLMAEHEQGDRYSYFYRGSNQSLDNILISKNIKDKVVFSPV 610

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          R SDH P+ +  DF
Sbjct: 611 HI----NASFMEEHGRASDHDPVVVQIDF 635


>gi|241888840|ref|ZP_04776146.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379]
 gi|241864516|gb|EER68892.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379]
          Length = 866

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 98/329 (29%), Gaps = 58/329 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76
               K+ + S+NI   S                     +   + K     DI+ L E+  
Sbjct: 323 PAEDKLTIASYNIENFSANNNGHDETP-----EEKVDKIANSFIKEVHSPDIITLIEVQD 377

Query: 77  YNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     K      +  +     +          +I  A     
Sbjct: 378 NNGGVNDGTVDGVKSGEKLAQRIKSLGGPDYK-YTEIAPVDGKDGGKPGANIRVAYLYNP 436

Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           K V ++ +                   P      S      R+++    E  G++I V+ 
Sbjct: 437 KRVTLIGKEKGGSEEAARFVNGHLEKNPARIDPTSVHFEKVRKSLAAEFEFKGERIVVIA 496

Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            HLKS    D++  +  PS         ++A+ L  +I +  ++   + FV+ GDFN   
Sbjct: 497 NHLKSKLGDDAIYGSNQPSVENTKAKRIEEAKILNAFIKEGLRQNPNLKFVLTGDFNDFE 556

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                     KTI  N+ +    + +     +     +   +D  ++ +N    ++    
Sbjct: 557 FSDSV-----KTIVGNELVNLMAEHEQGDRYSYFYRGSNQSLDNVLISKNIKDKVVFSPV 611

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          R SDH P+ +  DF
Sbjct: 612 HI----NASFMEEHGRASDHDPVVVQIDF 636


>gi|324991333|gb|EGC23266.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK353]
          Length = 749

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   +  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEREAGTSDEAASFSGGHLVKNPARISPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|262283216|ref|ZP_06060983.1| LPXTG cell wall surface protein [Streptococcus sp. 2_1_36FAA]
 gi|262261468|gb|EEY80167.1| LPXTG cell wall surface protein [Streptococcus sp. 2_1_36FAA]
          Length = 779

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 101/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           +        K+ + S+NI   S         +         T +   +       DI+ L
Sbjct: 346 ISPLYPSEDKLTIASYNIENFSANTQKGETPD------EKVTKIANSFINEIHSPDIITL 399

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K      +  +               ++I  A
Sbjct: 400 IEVQDDNGSVNDGTTSGVKSGEKLAARIKELGGKNYK-YTEVAPFDGQDGGKPGSNIRVA 458

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P      + +    R+++    E  G+ 
Sbjct: 459 FLYNPDRVKLVEKEAGKSDEAASFSGGHLVKNPARIDPTNPAFTKVRKSLAAEFEFKGQH 518

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           + V+  HLKS    D++  +  P+         ++A+ L +++ +  ++   + FV+ GD
Sbjct: 519 VVVIANHLKSKLGDDAVYGSNQPAVQHTQAARIEEAKILNNFVQEGLRQNPNLKFVLTGD 578

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K I  N+ +    +   +   +     +   +D   + +N     
Sbjct: 579 FNDF-----EFSETAKAIAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 633

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           I                   R SDH P+ +  DF
Sbjct: 634 IFAPVHI----NASFMEEHGRASDHDPVVVQLDF 663


>gi|332359097|gb|EGJ36918.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK49]
          Length = 749

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P      + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIEPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|325690981|gb|EGD32981.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK115]
          Length = 749

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|327462960|gb|EGF09281.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1]
          Length = 749

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                     K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  +I +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFIQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|324994996|gb|EGC26909.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK678]
          Length = 749

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                     K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  +I +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFIQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|324993691|gb|EGC25610.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK405]
 gi|325696321|gb|EGD38212.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK160]
          Length = 749

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                     K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  +I +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFIQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|327474564|gb|EGF19969.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK408]
          Length = 749

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           +        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 ISPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|315181613|gb|ADT88526.1| Metal-dependent hydrolase [Vibrio furnissii NCTC 11218]
          Length = 264

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/275 (20%), Positives = 108/275 (39%), Gaps = 23/275 (8%)

Query: 39  GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             S   +  KRT+ D+  L ++ + +++D++  QE+ S  A+  V       +     + 
Sbjct: 4   NASAPVDKSKRTSEDFAALSKHFRTVNSDVLAFQEVDSVQAIQNVVGSAYQIVLSDRAQP 63

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKI 157
            +   +  + + +T  AVR            L G +        R A  +++  +  + +
Sbjct: 64  AHEQHQFKDLNQYTGFAVRNTVPFSDPADVDLYGKRHH----KLRFAAYIVLYPDSPQPV 119

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
             L +HLK+ C           SC  L  Q + L  WI Q++     +VI GDFN  + Y
Sbjct: 120 HTLSVHLKAGCSG--KFRANQTSCQTLLTQGKALNAWIKQRESKQQAYVILGDFNHNLAY 177

Query: 218 LGNNDDFWKTIDPNDSL--IRFPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKF 269
            G  D  W+T+     +      ++  + C        N+  + +  ID+ ++       
Sbjct: 178 RG--DWLWQTMTQGTLIEPTLASRQTPATCKVRSRQQPNQLHQFRSLIDHIIVSPTL--- 232

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  ++ +   D+      LSDHCP+  +  +
Sbjct: 233 -KASDTQQVNFESQDVLRYA--LSDHCPLRSELQW 264


>gi|332367348|gb|EGJ45082.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK1059]
          Length = 736

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 335 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 388

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 389 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 447

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 448 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQN 507

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 508 IVVIVNHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 567

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 568 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 622

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 623 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 652


>gi|327490122|gb|EGF21910.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK1058]
          Length = 749

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQN 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIVNHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|254780797|ref|YP_003065210.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040474|gb|ACT57270.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 231

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 112/227 (49%), Positives = 158/227 (69%), Gaps = 9/227 (3%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           AQ++R+ SWNIN LSE+ GV+L+KNSV R  +DY LL++YA+ LDADIV LQE+GSY A+
Sbjct: 4   AQRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEAI 63

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +VFP + W I YS      H+         TAI +RK  + +LQ+SY  +  +   S+A
Sbjct: 64  KRVFPNDKWDILYSGSNTDKHAMH-------TAIVIRKGAIHLLQKSYLPMDTEGLDSKA 116

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G RRAVE+L E++G+KIW+LDIHLKSFCFLDS+E++Y  SC +L+ QA WLK W+ QK  
Sbjct: 117 GKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQKNN 176

Query: 201 SLVPFVIAGDFNR--KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             +PF+IAGDFNR    ++ G  D+ W+ I+ +++L+R P +K+   
Sbjct: 177 LNMPFIIAGDFNRKINHSHSGIKDELWQKINQDNTLMRLPHKKNHNA 223


>gi|332358304|gb|EGJ36130.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK355]
          Length = 749

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSEEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDVADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|86148017|ref|ZP_01066320.1| Metal-dependent hydrolase [Vibrio sp. MED222]
 gi|85834241|gb|EAQ52396.1| Metal-dependent hydrolase [Vibrio sp. MED222]
          Length = 215

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 9/219 (4%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +++    ++   +  + +  + + + SWNI  LS  E V+ + +  +R  +D+  L QY 
Sbjct: 1   MKRLQNWIMLGCLLSSQAFGEPLTISSWNIEWLSTNEAVNKFSD--QRDQADFDKLEQYF 58

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           ++L++D+V  QE+   NA+ ++       +        N + +    + +T  AVRK  +
Sbjct: 59  QSLNSDVVAFQEVDDINAIQRIAGDQYKILMSDRALPENSNHQFKEVNQYTGFAVRKGII 118

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                 +PL         +  R A  ++V+ + K I +L +HLK+ C   S     +  C
Sbjct: 119 LTDYADFPLESGA----NSKLRFASYMVVKTDTKPIHMLSVHLKAGC---SGAYKSNRDC 171

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
           S L  QAQ L  WI Q++     + I GDFN  ++Y   
Sbjct: 172 SRLKDQAQQLNKWIQQRERQGQDYAILGDFNHNLSYSEI 210


>gi|157151208|ref|YP_001450928.1| LPXTG cell wall surface protein [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157076002|gb|ABV10685.1| LPXTG cell wall surface protein, nuclease/phosphatase domain
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 779

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           +        K+ + S+NI   S         +         T +   +       DI+ L
Sbjct: 346 ISPLYPSEDKLTIASYNIENFSANTQKGETPD------EKVTKIANSFINEIHSPDIITL 399

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K      +  +     L         ++I  A
Sbjct: 400 IEVQDDNGSVNDGTTSGVKSGEKLAARIKELGGKNYK-YTEVAPLDGQDGGKPGSNIRVA 458

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P      + +    R+++    E  G+ 
Sbjct: 459 FLYNPDRVKLVEKEAGTSDKAASFSGGHLLKNPARIDPTNPAFTKVRKSLVAEFEFKGQH 518

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           + V+  HLKS    D++  +  P+         ++A+ L +++ +  ++   + FV+ GD
Sbjct: 519 VVVIANHLKSKLGDDAVYGSNQPAIQHTQAARIEEAKILNNFVQEGLRQNPNLKFVLTGD 578

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K I  N+ +    +   +   +     +   +D   + +N     
Sbjct: 579 FNDF-----EFSETAKAIAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 633

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           I                   R SDH P+ +  DF
Sbjct: 634 IFAPVHI----NASFMEEHGRASDHDPVVVQLDF 663


>gi|312130396|ref|YP_003997736.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
 gi|311906942|gb|ADQ17383.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
          Length = 275

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 93/299 (31%), Gaps = 33/299 (11%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
             +  L+    + AQ +R+ S+NI      +GV+ W             + +  +  D D
Sbjct: 4   FFILILLLSVQASAQNLRISSYNIRMNRANDGVNNWNLRK-------DKVNELIRYHDFD 56

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           IV +QE      +  +     +    S       +   S     T+     K+       
Sbjct: 57  IVGVQEAFKDQ-LDDMLRMKEYAYTGSGREDGKSAGEHSAILYKTSRFKLLKSGDFWYSE 115

Query: 128 YPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
            P +  K   +R  NR       +  +  K+ +V + H     F          S  LL 
Sbjct: 116 TPDVPGKGWDARCCNRICSWARFKDLVTKKEFYVFNSH-----FDHEGVEARRNSGKLLV 170

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            + + +           +P +  GD N   +            D  ++    P       
Sbjct: 171 AKMKEIA--------GKLPVIAMGDLNSTPDTEQVVYISQHYNDTFNASEMPPYGPIGTF 222

Query: 246 NANKNL-RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           NA K     K  IDY  + ++         F    Y       + K  SDH P+ +D +
Sbjct: 223 NAFKYDAALKDRIDYIFVSEH---------FKVKKYATLTDSYQQKFPSDHLPVVVDLE 272


>gi|319939609|ref|ZP_08013968.1| LPXTG cell wall surface protein [Streptococcus anginosus 1_2_62CV]
 gi|319811198|gb|EFW07504.1| LPXTG cell wall surface protein [Streptococcus anginosus 1_2_62CV]
          Length = 736

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 98/329 (29%), Gaps = 59/329 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFLQEMGS 76
               K+ + S+NI   S         +      +    + + +       DI+ L E+  
Sbjct: 357 PSEDKLTIASYNIENFSANNATGETPD------AKVEKIAKSFINEIHSPDIITLIEVQD 410

Query: 77  YN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                  A  K      +        +         ++I  A     
Sbjct: 411 NNGSVNDGTVSGVQSGEKLAAKIKQLGGKEYKYVEVA-PVDGADGGKPGSNIRVAFLYNP 469

Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           + V+++++                   P      +      R+++    E  G++I V+ 
Sbjct: 470 QRVKIVEREAGSSTEAAAFKDGHLVKNPARIDPTNPVFEKVRKSLAAEFEFKGERIVVIA 529

Query: 162 IHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            HLKS    D++  +  P+         +Q + L  ++ +  K+   + FV+ GDFN   
Sbjct: 530 NHLKSKLGDDAVYGSKQPAVQNTLAQRIEQGKLLNAFVKEGLKQNPNLKFVLTGDFNDF- 588

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                  +  K +  N+ +        +   +     +   +D   + +N     +    
Sbjct: 589 ----EFSETAKAVAGNELVNMMLNHDAADRYSYFYRGSNQSLDNIFVSKNIADKTVFSPV 644

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          R SDH P+    DF
Sbjct: 645 HI----NASFMEEHGRASDHDPVIAQLDF 669


>gi|325695083|gb|EGD36986.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK150]
          Length = 749

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGMSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I ++  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVIIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|325687087|gb|EGD29110.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK72]
          Length = 749

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTKIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDVADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|332362279|gb|EGJ40079.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK1056]
          Length = 749

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                     K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|328946887|gb|EGG41024.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK1087]
          Length = 749

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTKIANSFINEIHSPDIITL 401

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSNGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I ++  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVIIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|327462051|gb|EGF08380.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK1057]
          Length = 720

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 319 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTKIANSFINEIHSPDIITL 372

Query: 72  QEMGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                  A  K     T+  +     L         ++I  A
Sbjct: 373 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 431

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 432 FLYDPNRVKLVEKEAGTSDEAASFSNGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 491

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I ++  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 492 IVIIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 551

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 552 FNDF-----EFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 606

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 607 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 636


>gi|260770527|ref|ZP_05879460.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972]
 gi|260615865|gb|EEX41051.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972]
          Length = 264

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 109/275 (39%), Gaps = 23/275 (8%)

Query: 39  GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             S   +  KRT+ D+  L ++ + +++D++  QE+ S  A+  V       +     + 
Sbjct: 4   NASAPVDKSKRTSEDFAALSKHFRTVNSDVLAFQEVDSMQAIQNVVGSAYQIVLSDRAQP 63

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKI 157
            +   +  + + +T  A+R            L G +        R A  +++  +  + +
Sbjct: 64  AHAQHQFKDLNQYTGFAIRNTVPFSDPADVDLYGKRHH----KLRFAAYIVLYPDSPQPV 119

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
             L +HLK+ C           SC  L  Q + L  WI Q++     +VI GDFN  + Y
Sbjct: 120 HTLSVHLKAGCSG--KFRANQTSCQTLLTQGKALNAWIKQREAKQQAYVILGDFNHNLAY 177

Query: 218 LGNNDDFWKTIDPNDSL--IRFPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKF 269
            G  D  W+T+     +      ++  + C        N+  + +  ID+ ++       
Sbjct: 178 RG--DWLWQTMTQGTLIEPTLASRQTPATCKVRSRQQPNQLHQFRSLIDHIIISPTL--- 232

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               +  ++ +   D+      LSDHCP+  +  +
Sbjct: 233 -KASATQQVNFESQDVLRYA--LSDHCPLRSELQW 264


>gi|255036167|ref|YP_003086788.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
 gi|254948923|gb|ACT93623.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
          Length = 280

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 91/306 (29%), Gaps = 32/306 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           ++K+ L L+  L+  TAS AQ    + + S+N+   +  +GV+ W N           ++
Sbjct: 1   MKKFALYLLAMLLVTTASFAQKTATINVASYNLRYNTPNDGVNAWPNRK-------ENVK 53

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              +  + DI  +QE      +  V     +  +             S            
Sbjct: 54  GLIRFHEFDIFGVQEALVGQ-LKDVAELPEFAYYGKGRDDGKEGGEHSAIFYKKDRFKLL 112

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K+        P        +   NR       E    K      ++    F         
Sbjct: 113 KSGDFWLSETPDKPGLGWDATCCNRICSWAQFEDLKTKKKFFFFNVH---FDHQGVEARR 169

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S  L+ ++ + +              ++ GDFN                D +D   + P
Sbjct: 170 QSGHLMVKKIKEIA--------GNSTAILTGDFNSTPETEQIKTLGAALNDTHDVTKQAP 221

Query: 239 KEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              +   N+ K     K  IDY  + +N            + Y         +  SDH P
Sbjct: 222 YGPEGTFNSFKFDAPMKARIDYIFVSKN---------VDVLKYGVLTDSKEQRYPSDHQP 272

Query: 298 ISIDYD 303
           + +  +
Sbjct: 273 VLVKIE 278


>gi|323351045|ref|ZP_08086702.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           VMC66]
 gi|322122769|gb|EFX94478.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           VMC66]
          Length = 749

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKN-LDADIVFL 71
           V        K+ + S+NI   S                   T +   +       DI+ L
Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTRIANSFINEIHSPDIITL 401

Query: 72  QEMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            E+   N                     K     T+  +     L         ++I  A
Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460

Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                  V+++++                   P   A  + +    R+++    E  G+ 
Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           I V+  HLKS    D++  +  P+         +QA+ L  ++ +  ++   + FV+ GD
Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN          +  K +  N+ +    +   +   +     +   +D   + +N     
Sbjct: 581 FNDF-----EFSETAKALAGNELINLMQEHDVADRYSYFYRGSNQSLDNIFISKNLAGKT 635

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                   R SDH P+ +  DF
Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665


>gi|283778620|ref|YP_003369375.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
 gi|283437073|gb|ADB15515.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
          Length = 309

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 100/311 (32%), Gaps = 34/311 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSV---------------KRTTSDYTLLRQYAKNLD 65
           A  VR+ S+N   L  +       +                         +  +  K  +
Sbjct: 2   ATTVRVASFNCENLFARFEFKPNVDLDRISTDGWEINETLFEPNKPEARKITARAIKEAN 61

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           ADI+  QE+ + + + +   +N +   + +       + +    I  A+  R+K   V  
Sbjct: 62  ADIIAFQEVENLDVLKRF--RNQYLGGFKSYPHAVLIEGNDPRLIDVAVLSREKFPIVST 119

Query: 126 QSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +S+  + A   S     +R  +E+ +E+  + + +   HLKS        +       L 
Sbjct: 120 RSHHHVKANATSRGFVFSRDCLEVDIEVGSQTLTLFVNHLKSMMGGRDQTHERR---KLQ 176

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDS 243
           S   + L +          PF++ GD N  ++     +      +  N       +   +
Sbjct: 177 STWVKKLVNQRFGTDPGNNPFIVLGDLNDYLDSASDPDSGIRNLVKWNQVENVIERLPAA 236

Query: 244 RCNANKNLRNKIP--IDYFVMDQNAYKFLIQESF-------SEILYNEDDIK---SRGKR 291
               +          +DY ++ ++    +                Y         +   +
Sbjct: 237 ERWTHYWNGGNEYRQLDYLLVSKSLSSAVQSVEIIRGGLPTRATNYTGPRFPGVGTNDPK 296

Query: 292 LSDHCPISIDY 302
            SDHCPI ++ 
Sbjct: 297 ASDHCPIVVEL 307


>gi|322390045|ref|ZP_08063581.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis
           ATCC 903]
 gi|321143252|gb|EFX38694.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis
           ATCC 903]
          Length = 793

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 96/333 (28%), Gaps = 59/333 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQ 72
             T     K+ + S+NI   S     +             TL+     +   + DI+ L 
Sbjct: 359 ALTQPSEDKLTIASYNIENFSANNAKNETP------EDKVTLIANSFIHEIHNPDIITLI 412

Query: 73  EMGSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           E+   N                     K     ++  +     +         ++I   I
Sbjct: 413 EVQDNNGSVDDGTTSGVESGRKLANRIKELGGKSYE-YTEVAPVDGADGGKPGSNIRLGI 471

Query: 115 AVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
               + V + ++                   P   A +  S    R+++ +  E  G+ +
Sbjct: 472 LYNPERVSLAKKEAATSNEAAQFDKGHLVKNPARIAPNDPSFDHTRKSLAVEFEFKGQPV 531

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDF 211
            V+  HLKS    D++     P+          QA  +  ++ +  K+     FV+ GDF
Sbjct: 532 VVIANHLKSKIGDDAIYGASQPAVEHTLPTREAQASVIHQFVQEGLKQNPKTTFVLTGDF 591

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N             + +  N+      +       +     +   +D   +  N      
Sbjct: 592 NDYDFST-----TAQILAGNELTNLMAQHDAGDRYSYFYRGSNQVLDNIFISNNMAAKAR 646

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            E                 R SDH P+ +  DF
Sbjct: 647 FEPVHI----NASFMKEHGRASDHDPVLVQIDF 675


>gi|81299809|ref|YP_400017.1| hypothetical protein Synpcc7942_1000 [Synechococcus elongatus PCC
           7942]
 gi|81168690|gb|ABB57030.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 1076

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 93/323 (28%), Gaps = 44/323 (13%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V        ++ + ++N+  L   +       +  +  +    +     +   DI+ LQE
Sbjct: 629 VSTLTRGNDQLTVATYNVLNLDPNDNDGDADIANGQFAAIARQIINNLNS--PDIIALQE 686

Query: 74  MGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           +   +                           T+    +     N S      +I TA  
Sbjct: 687 VQDNSGSLNDGVTAANLTLQTLVDAIAAAGGPTYAFIDNPFITNNASGGQPGANIRTAYL 746

Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
               +   V      +   +   + AG R  +    E NG+ + +++ H  S      + 
Sbjct: 747 YDPSRVSFVEDSLTTIGSQQPGEAFAGARLPLVADFEFNGETVTLVNNHFSSKGGSAPIL 806

Query: 175 NTYSPSCSL------------LSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGN 220
            T  P  S                Q+Q ++D++  +  +      ++ GDFN        
Sbjct: 807 GTAQPFESRQEDSTVNGSLDDRQAQSQAVQDYVNGRLGNDPTAKVIVLGDFNEFEFVSPV 866

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
            D    T              ++         N   ID+ ++  +             + 
Sbjct: 867 RDLAANT----GLTNLTELLPENERYTFIFQGNSQSIDHILVSGSLANR-----AEIDIV 917

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
           N +   +   + SDH P+   + 
Sbjct: 918 NVNTEFAESLQASDHDPVLARFT 940


>gi|56750554|ref|YP_171255.1| hypothetical protein syc0545_d [Synechococcus elongatus PCC 6301]
 gi|56685513|dbj|BAD78735.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 1088

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 93/323 (28%), Gaps = 44/323 (13%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V        ++ + ++N+  L   +       +  +  +    +     +   DI+ LQE
Sbjct: 641 VSTLTRGNDQLTVATYNVLNLDPNDNDGDADIANGQFAAIARQIINNLNS--PDIIALQE 698

Query: 74  MGSYN------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           +   +                           T+    +     N S      +I TA  
Sbjct: 699 VQDNSGSLNDGVTAANLTLQTLVDAIAAAGGPTYAFIDNPFITNNASGGQPGANIRTAYL 758

Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
               +   V      +   +   + AG R  +    E NG+ + +++ H  S      + 
Sbjct: 759 YDPSRVSFVEDSLTTIGSQQPGEAFAGARLPLVADFEFNGETVTLVNNHFSSKGGSAPIL 818

Query: 175 NTYSPSCSL------------LSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGN 220
            T  P  S                Q+Q ++D++  +  +      ++ GDFN        
Sbjct: 819 GTAQPFESRQEDSTVNGSLDDRQAQSQAVQDYVNGRLGNDPTAKVIVLGDFNEFEFVSPV 878

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
            D    T              ++         N   ID+ ++  +             + 
Sbjct: 879 RDLAANT----GLTNLTELLPENERYTFIFQGNSQSIDHILVSGSLANR-----AEIDIV 929

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
           N +   +   + SDH P+   + 
Sbjct: 930 NVNTEFAESLQASDHDPVLARFT 952


>gi|296876028|ref|ZP_06900084.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis
           ATCC 15912]
 gi|296432939|gb|EFH18730.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis
           ATCC 15912]
          Length = 770

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 97/331 (29%), Gaps = 59/331 (17%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEM 74
           T     K+ + S+NI   S     +             TL+     +   + DI+ L E+
Sbjct: 342 TQPSEDKLTIASYNIENFSANNAKNETP------EDKVTLIANSFIHEIHNPDIITLIEV 395

Query: 75  GSYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
              N                     K     ++  +     +         ++I   I  
Sbjct: 396 QDNNGSVDDGTTSGVESGRKLANRIKELGGKSYE-YTEVAPVDGADGGKPGSNIRLGILY 454

Query: 117 RKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
             + V + ++                   P   A +  S    R+++ +  E  G+ + V
Sbjct: 455 NPERVSLAKKEAATSNEAAQFDKGHLVKNPARIAPNDPSFDHTRKSLAVEFEFKGQPVVV 514

Query: 160 LDIHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNR 213
           +  HLKS    D++     P+          QA  +  ++ +  K+ S   FV+ GDFN 
Sbjct: 515 IANHLKSKIGDDAIYGASQPAVEHTLPTREAQASVIHQFVQEGLKQNSKTTFVLTGDFND 574

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                       + +  N+      +       +     +   +D   +  N       E
Sbjct: 575 YDFST-----TAQILAGNELTNLMDQHDAGDRYSYFYRGSNQVLDNIFISNNMAAKARFE 629

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R SDH P+ +  +F
Sbjct: 630 PVHI----NASFMKEHGRASDHDPVLVQIEF 656


>gi|167644355|ref|YP_001682018.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
 gi|167346785|gb|ABZ69520.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
          Length = 266

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 90/281 (32%), Gaps = 38/281 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+RL+++N++     +              D   + +     + D+V LQE+    A  K
Sbjct: 2   KLRLMTYNVHRCVGTDR-----------KLDVERVAEVIAAENPDVVALQELDVRRARTK 50

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +          +   H       +++   A+         ++  L            
Sbjct: 51  GVDQAHRLAELLKMKSHFHPAMAVEEELY-GDAILTALPEKKVKADGLPLYTRIPG-LEP 108

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+ + VE+ G  + +++ HL         +     + +LL +Q    +DW        
Sbjct: 109 RGAIWVTVEVGGVPVQIINTHL-----GLVPQEQKRQAAALLGEQWMAHEDW-------K 156

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P ++ GDFN               +    +     K+  +    ++     + ID+  +
Sbjct: 157 APGILLGDFNASPYSAT-YRLLRAALRDAQTQSPTWKKTPTATFPSRFPF--MRIDHVFL 213

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +      +   +              +  SDH P+ +D +
Sbjct: 214 TKGLETVNVSSPY----------GPLARVASDHLPLVVDLE 244


>gi|182412613|ref|YP_001817679.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
 gi|177839827|gb|ACB74079.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
          Length = 808

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 83/287 (28%), Gaps = 44/287 (15%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A  A ++RL+++N++  S  +G    +            + +       D+V LQE+   
Sbjct: 549 APAANRLRLMTYNVHGCSGMDGRVSPR-----------RVARVIAAHGPDLVALQEIDLG 597

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              ++   +           ++           H   A+  +    + +   L      +
Sbjct: 598 RRRSRAEDQAALIAHQLGLHMVFCPTVTRGQ-EHYGHALLSRWPIEVVKRKLLPHDPRGW 656

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWI 195
                R A+   V I    + V+  HL                      Q + L   +W+
Sbjct: 657 -WKEPRAALWARVWIGDTPVHVVTTHLGLG-------------RRERLLQMKMLLSPEWL 702

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                     V+ GDFN             +  D         ++     +   + R  +
Sbjct: 703 -GGLRDDERVVLCGDFNLTPGSAPYGLMANRLQDAQ-----AARDGHRPLSTFSSNRPFV 756

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D+  +  +     ++                 +  SDH P+ +D 
Sbjct: 757 RLDHIFISPHFRVQDVRVP----------RSELTRVASDHLPLIVDL 793


>gi|269104284|ref|ZP_06156980.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268160924|gb|EEZ39421.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 296

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 67/314 (21%), Positives = 126/314 (40%), Gaps = 35/314 (11%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           I+   L L +  +    + A+++R++SWN+  L+      +      R T D++ +R   
Sbjct: 4   IKPLKLILAYIALSPNVTTAEELRIMSWNMQWLNHHASSPV-----LRDTDDFSQIRSII 58

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           + +D DI+  QE+GS  A+  V P   + I  S+           N +  T  A+RK   
Sbjct: 59  EQVDPDILAFQEVGSLKAMTMVLPLKQYDILLSSRADHPR-YTFPNTNQFTGFAIRKNIR 117

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                 +     K + ++ G R    L +    ++I +L+IHLK+ C     ++  S +C
Sbjct: 118 YRELPDF----TKINLNKKGLRYGKNLKIWWQDQQIHLLNIHLKAGC----KQSKRSKAC 169

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPNDSL 234
             L +Q + L  W+  + E+   +++ GDFN  +           +N  F+K +    + 
Sbjct: 170 RQLKKQLKLLSLWLKTRIENNHSYILLGDFNYPLYTSLNNKKEKQHNHWFFKQLGIPTTA 229

Query: 235 IRFPKEKDSRCNANKNLR------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                +    C    + +         PID+          +         Y   ++ S 
Sbjct: 230 -LKQHKTSFSCQIKIHHKKSRLITYTQPIDHV-----ISDKINISKLETYQYTNKEMSSN 283

Query: 289 GKRLSDHCPISIDY 302
             +LSDHCP+    
Sbjct: 284 --QLSDHCPLYFSI 295


>gi|315224062|ref|ZP_07865903.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea
           F0287]
 gi|314946033|gb|EFS98041.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea
           F0287]
          Length = 274

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 91/302 (30%), Gaps = 32/302 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++  +  L F     T S+AQ + ++++NI     Q+GV+ W +           +    
Sbjct: 1   MKPLLFILCFL---PTFSIAQDLTVMTYNIRCEVPQDGVNAWTDGN-----RKEKVFTVL 52

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              + DI  +QE   +          T+            +   S               
Sbjct: 53  TEANPDIFGVQEALPHQLKFLEERFPTYQREGVGRDDGKEAGEHSAIFFKKGRFTLLDKG 112

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                  P + +    +   NR    + ++      WV ++H     F    +     S 
Sbjct: 113 NFWLSQTPEVPSLGWDATCCNRICSWVKLKDKKTTFWVFNLH-----FDHEGKVAQVQSA 167

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L+ Q+ + +              ++ GDFN    +        +  D   S        
Sbjct: 168 DLVLQKIKEIAK--------GGKVILMGDFNLPTEHPAVQKIASQLYDTQLSPTNKTPN- 218

Query: 242 DSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               NA K     K  ID+  +         Q+S     Y   + +  G   SDH P+ +
Sbjct: 219 MGTFNAFKTDEPLKGHIDFIFV---------QKSIKVKQYKIIETRIDGLYPSDHLPVWV 269

Query: 301 DY 302
           + 
Sbjct: 270 EL 271


>gi|260172862|ref|ZP_05759274.1| hypothetical protein BacD2_13418 [Bacteroides sp. D2]
 gi|315921145|ref|ZP_07917385.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695020|gb|EFS31855.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 290

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 69/308 (22%), Gaps = 26/308 (8%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK ++ L    V      AQ++ + S+N+   +  +  +              +L Q  
Sbjct: 1   MRKLLIVLTLCGVSILN--AQQLNVASYNVRNSNPNDAKAGNG-----WEQRCPVLTQLI 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              D DI   QE+        +     +                +            K+ 
Sbjct: 54  TFHDFDIFGAQEVKHNQLEDMLNALPAYNYIGVGRDDGKTKGEYAPIFYRKDKFKLLKSG 113

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                          +  A  R       +    K      +L               S 
Sbjct: 114 NFWLSE-DTTKPNKGWDAAYTRICTWGEFKDKTGKFKFWFFNLHM---DHIGVVARRESA 169

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDSLIRF 237
            L+  + + +            P ++ GDFN                         +   
Sbjct: 170 KLVISKIKEMC--------GKDPVILTGDFNVDQTSESYQVLHESGILSDSYEVAQMRYA 221

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHC 296
                +  N N        ID+  +  N                 +          SDH 
Sbjct: 222 TNGTCTGWNPNTY--TPNRIDHIFVTPNFTVEKYGVLTDTYRTKNETTGKYESHIPSDHF 279

Query: 297 PISIDYDF 304
           P+     F
Sbjct: 280 PVKAVLRF 287


>gi|256828980|ref|YP_003157708.1| Endonuclease/exonuclease/phosphatase [Desulfomicrobium baculatum
           DSM 4028]
 gi|256578156|gb|ACU89292.1| Endonuclease/exonuclease/phosphatase [Desulfomicrobium baculatum
           DSM 4028]
          Length = 837

 Score =  123 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 93/290 (32%), Gaps = 44/290 (15%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             A  +++VR++++N+++    +G                 + +     + D+V LQE+ 
Sbjct: 561 SQAPHSEQVRVMTYNVHSCVGIDG-----------KLAAERIARVIAQANPDVVALQELD 609

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           +  A      +      Y   +   H       +     A+       + +S PL G   
Sbjct: 610 AGRARTGGEDQAQRIAHYLEMQHHFHPHIHV-ENEKYGDAILTHLPMRIIKSGPLPGHL- 667

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KD 193
              +   R A+ + ++++G ++ +++ HL                      Q + L   D
Sbjct: 668 PGGKLEPRGAIWVAIDLHGTEVNIVNTHLGLTS-------------RERVLQIEALLGDD 714

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           W+  +  +  P ++ GDFN   +  G      + +D    L  +            +   
Sbjct: 715 WL-GRLNADQPVILCGDFNCVPSSKGYKLMRSRFLDAQAELKEYR-----PVCTFYSRLP 768

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ID+  +        I                  K  SDH P+  D  
Sbjct: 769 SFRIDHVFIQPGIQVTGITVP----------CSELAKVASDHLPLIADLT 808


>gi|262274141|ref|ZP_06051953.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886]
 gi|262221951|gb|EEY73264.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886]
          Length = 252

 Score =  123 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 17/250 (6%)

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +DAD+V  QE+ S  +++KV     +  ++S      H      +   T  AV+K    V
Sbjct: 9   IDADLVAFQEVDSEASLSKVLNPTAYDFYFSDRT--KHFNHSRRSHQFTGWAVKKGIKVV 66

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCS 182
             + Y  LG     SR   R    + V+   +  + +L IHLKS CF        + SC 
Sbjct: 67  DHEDYQPLGLPTFLSRGNLRYGAYIEVKRENQPPLHLLSIHLKSGCF--ETPIRRNNSCK 124

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID-PNDSLIRFPKEK 241
            L  Q + L  WI  + +    F+IAGDFN  +N           +D   D+L++  K  
Sbjct: 125 KLDHQIEALSVWINARLKLGQDFIIAGDFNHYLNDKNEWVWKQLLLDVGEDNLVKLTKGT 184

Query: 242 DSRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            ++C A K                ID+ +  + A   L      +  Y+   + +   RL
Sbjct: 185 PAKCKARKYNYRTKRWEHVVYQKLIDHIIASKGAVSALNPPQARQYQYSYHAVATY--RL 242

Query: 293 SDHCPISIDY 302
           SDHCPI +D 
Sbjct: 243 SDHCPIVVDL 252


>gi|326798228|ref|YP_004316047.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326548992|gb|ADZ77377.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 282

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 85/307 (27%), Gaps = 31/307 (10%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M RK +  L   ++  +   AQ++R+ ++N+   +  +  +LW++          ++   
Sbjct: 1   MKRKIIGVLCLLIIGISTLQAQQLRVATFNVRYANPGDTGNLWEDRAP-------VVAAL 53

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               D DI   QE               +  +             S            K 
Sbjct: 54  IDFHDFDIFGTQEALKRQLDDISAALPEYQRYGLGRDDGQEGGEHSAIYFKKDRFFLLKK 113

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                   P   +    +++  R    + +     K      +                S
Sbjct: 114 GDFWLSETPDKPSFGWDAKSHKRICSWIQLRDKKSKREFFVFNAHY---DHQGIQARKES 170

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF--- 237
             L+  + + +            P +  GD N               +  +   +     
Sbjct: 171 SKLILNKIKEIAQ--------GAPTIFTGDMNGSEETEWYQALAQSALLKDTQKLVAKPY 222

Query: 238 -PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            P    +     K+L+    ID+  + ++         F  + +        GK  SDH 
Sbjct: 223 KPNASFNGFGNEKSLQATAIIDHIFVTKD---------FKALKWGVLTDTYHGKFPSDHF 273

Query: 297 PISIDYD 303
           P+ +D +
Sbjct: 274 PVMVDLE 280


>gi|298482489|ref|ZP_07000675.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
 gi|298271468|gb|EFI13043.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
          Length = 316

 Score =  122 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/325 (12%), Positives = 87/325 (26%), Gaps = 36/325 (11%)

Query: 1   MIRKYVLALVFFLVPC----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           M  K +L +    +      +        + S+N+   +  + +             Y +
Sbjct: 1   MKLKSLLLITLVTIAFCGCQSNYQPTTFTVASYNLRNANGNDSLHGNG-----WGQRYPV 55

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           + +  +  D DI   QE   +           +                S     T    
Sbjct: 56  IAKMVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKTQGEHSAIFYRTDKFD 115

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +         P + +K  +     R       +        L  +L         +  
Sbjct: 116 IIEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKA 171

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLI 235
              S  L+ ++ + L           +P ++ GDFN    +   N    K  +  +    
Sbjct: 172 RVESAYLVQEKMKELGK------GKNLPAILTGDFNVDQTHQSYNAFVEKGVLCDSYEKC 225

Query: 236 RFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFL---------------IQESFSEIL 279
            F    +   N+          ID+  +    +                   +E+ ++  
Sbjct: 226 DFRYATNGTFNSFNPNSFTESRIDHVFVSPAFHVKRYGILTDTYRSIVGNGEKENANDCP 285

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
              D    + +  SDH P+ ++ +F
Sbjct: 286 EEIDIKAYQARTPSDHFPVKVELEF 310


>gi|223936857|ref|ZP_03628766.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514]
 gi|223894426|gb|EEF60878.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514]
          Length = 273

 Score =  122 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 82/298 (27%), Gaps = 47/298 (15%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
                   L    A      R++++NI+     +              D   +    K  
Sbjct: 17  IFCGFFVLLTNLQAESTNTFRVMTYNIHHGEGLDK-----------QVDLQRIADLIKQE 65

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            ADIV LQE+                   +    +  S            A+  +     
Sbjct: 66  KADIVALQEVDRNTERTGKRDFPAEFTRLTGMSCVF-SNNWPVQGGEYGTAILTRFPITK 124

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           ++                R  ++  V++  +++ V++ H+      +    +     +++
Sbjct: 125 REH----SLLKMVGSKEQRGLLQAHVKMGDREVVVMNTHVDHRKTDEERLESIMEFATVI 180

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            ++A+              P +  GDFN         +     +D +  L       +  
Sbjct: 181 KKKAEL-------------PVIFCGDFNDVPGS-PTYEQMSALLDDSWKL-----IGEGE 221

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  + +  IDY  + +     +I                     SDH P+ +++
Sbjct: 222 GWTIPAEKPRRRIDYIWISK--KGPIIPLRAWV----------PASEASDHRPLVVEF 267


>gi|313156903|gb|EFR56341.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 294

 Score =  122 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 79/308 (25%), Gaps = 22/308 (7%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           + K ++ +    V    + AQ     ++NI  L+ ++                 ++    
Sbjct: 1   MNKLLICMAVACVTAFNAAAQSFSAATYNIRQLNAKDTAEGNG-----WERRLPVISSLI 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +  D DI   QE+        +     +                S             + 
Sbjct: 56  RFHDFDIFGAQEVFHSQLQGMLAALPGYDYVGVGRDDGAAGGEYSAIFYKRGRFRLLDSG 115

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                  P    K  +     R            +                 E   + SC
Sbjct: 116 HFWLSEDPSKPGK-GWDAKYVRICTWGRFYDRQSRQRFWFFTTH---TDHRGEQAQAESC 171

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L+  + + L              ++ GDFN               I  +       +  
Sbjct: 172 RLILAKIEELCR--------GERVILTGDFNVGETSRSYAILRDSGILSDTYDTAEIRYA 223

Query: 242 DSRCNANKNLR--NKIPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRGKRLSDHC 296
           ++      +        IDY  +          ++ +++     +  + K R +  SDH 
Sbjct: 224 ETGTENWFDPDIKTFRRIDYLFVTPGFRVLRYGILTDTYRSENPDGGERKFRARTPSDHF 283

Query: 297 PISIDYDF 304
           P+ ++ +F
Sbjct: 284 PVQVELEF 291


>gi|300771475|ref|ZP_07081350.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300761464|gb|EFK58285.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 279

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 82/303 (27%), Gaps = 29/303 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK ++A V   +  T + AQ+ R+ ++NI   +  +  ++W             L    
Sbjct: 1   MRKTIIATVLVALVSTMTYAQQFRIATYNIRQKNTHDTGNMWDERK-------EALTNLI 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           K    +I   QE  +            +                S     T      K+ 
Sbjct: 54  KFHQFEIFGTQEGFNDQLADMERLLPGFKYIGVGRDDGAEKGEYSAIFYDTKRFEVSKSG 113

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                +  +      +  A  R     + +    K   + ++     F          S 
Sbjct: 114 TFWLSATDISKPNKGWDAALPRICTWGIFKDKKTKKQFILMNTH---FDHVGVTARKESA 170

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L+  +A+             +P +I GDFN               I  +       +  
Sbjct: 171 KLMMAKAKEFA--------GNLPLIITGDFNVSETDEAYFTLANSGIVADSYSKIDSRYA 222

Query: 242 DSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            +               ID+  +            FS   Y        GK  SDH P+ 
Sbjct: 223 PNSTFNGFGKSIKPAERIDHIFITPQ---------FSVKKYGILTDTYVGKYPSDHFPVM 273

Query: 300 IDY 302
           +D 
Sbjct: 274 VDL 276


>gi|88813281|ref|ZP_01128520.1| hypothetical protein NB231_07277 [Nitrococcus mobilis Nb-231]
 gi|88789453|gb|EAR20581.1| hypothetical protein NB231_07277 [Nitrococcus mobilis Nb-231]
          Length = 556

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 86/297 (28%), Gaps = 26/297 (8%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +RL S+N+       G    +++          L +    LDAD++ L E+ + +   
Sbjct: 269 GALRLASFNMENYFINRGGRGAESAAA-FRRQQRKLVEAIVALDADVLALHEVENRH--- 324

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +        I  ++     +    +  D  +  A+R   +   Q+  P      +     
Sbjct: 325 RAVAALVRAINTASPSEARYLAAAAGADYGSG-AIRTVLLYREQRLVP-RSVWINEDSVF 382

Query: 142 NRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSP-----SCSLLSQQAQWLKDWI 195
            R  +      ++G+   V  +               S         L  +QA  L  W+
Sbjct: 383 TRPPIAADFRRLDGEPATVGVVAAHLKSKGGCRARGDSDQGRGCWGRLRRRQAAALSQWL 442

Query: 196 TQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            + +       F++ GD N               +      +   +   +          
Sbjct: 443 KRLQAAVDQPRFLLMGDLNSYPGEA----AVQTLLSAGLRDLIAERVAPADRYTYVYHGY 498

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------KRLSDHCPISIDY 302
              +D+ +        + Q +   I  +E                R SDH P+ +D 
Sbjct: 499 AGYLDHALATVALADAVGQVAIWHINADEPRYLGYTNPRAKPTFYRSSDHDPVVVDL 555


>gi|227536399|ref|ZP_03966448.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243775|gb|EEI93790.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 279

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 85/303 (28%), Gaps = 29/303 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK ++A VF  +  T + AQ+ R+ ++NI   +  +  ++W             L    
Sbjct: 1   MRKTIIATVFVALVSTMTYAQQFRIATYNIRQKNTHDIGNMWDERK-------EALTNLI 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           K  + +I   QE  +   V        +                S     T      K+ 
Sbjct: 54  KFHEFEIFGTQEGFNDQLVDMERLLPGFKYIGVGRDDGAEKGEYSAIFYDTKRFEVSKSG 113

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                +  +      +  A  R     + +    K   + ++     F          S 
Sbjct: 114 TFWLSATDISKPNKGWDAALPRICTWGIFKDKKTKKQFILMNTH---FDHVGVTARKESA 170

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L+  +A+             +P +I GDFN               I  +       +  
Sbjct: 171 KLMMAKAKEFA--------GNLPLIITGDFNVSETDEAYFTLANSGIVADSYSKIDSRYA 222

Query: 242 DSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            +               ID+  +            FS   Y        GK  SDH P+ 
Sbjct: 223 PNSTFNGFGKSIKPTERIDHIFITPQ---------FSVKKYGILTDTYVGKYPSDHFPVM 273

Query: 300 IDY 302
           +D 
Sbjct: 274 VDL 276


>gi|299145020|ref|ZP_07038088.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_23]
 gi|298515511|gb|EFI39392.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_23]
          Length = 289

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 76/313 (24%), Gaps = 36/313 (11%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK  + L    V      AQ++ + S+N+   +  +  +              +L +  
Sbjct: 1   MRKLFIVLALCGVSILN--AQQLNVASYNVRNSNPNDAKAGNG-----WEQRCPVLTRLI 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              D DI   QE+        +     +                +       I  RK   
Sbjct: 54  TFHDFDIFGAQEVKHNQLEDMLNALPQYSYIGVGRDDGKTKGEYAP------IFYRKDKF 107

Query: 122 RVLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           ++L+     L          +  A  R       +    K      +L            
Sbjct: 108 KLLKSGNFWLSEDTSKPNKGWDAAYTRICTWGEFKDITGKFRFWFFNLHM---DHIGVVA 164

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPND 232
              S  L+  + + +            P ++ GDFN                        
Sbjct: 165 RRESAKLVISKIKEMC--------GKDPVILTGDFNVDQTSESYQVLHESGILSDSYEVA 216

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR- 291
            L        +  N N        ID+  + +N                 +       R 
Sbjct: 217 QLRYATNGTCAGWNPNTY--TPNRIDHIFVTKNFAVEKYGVLTDTYRIKNEATGKYEARI 274

Query: 292 LSDHCPISIDYDF 304
            SDH P+     +
Sbjct: 275 PSDHFPVKAVLKY 287


>gi|333030574|ref|ZP_08458635.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
 gi|332741171|gb|EGJ71653.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
          Length = 288

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 100/314 (31%), Gaps = 38/314 (12%)

Query: 2   IRKYVLALVF----FLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           ++KY+L L+      L  C +S  +  ++++++NI   +  +G   W++  ++  +    
Sbjct: 1   MKKYLLLLMAVSMGLLSACNSSQPKLDLKVMTFNIRLDTSDDGEYSWEHRKEQAGA---- 56

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
               AK  D D++  QE+ ++           +                S+         
Sbjct: 57  ---MAKAQDCDLIGTQEVLNHQLEDLKAALPEYEAVGVGRADGKTEGEYSSLLYKKDRFD 113

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
              +        P +     +  A  R A  +L++       V  I+             
Sbjct: 114 ALDSGTFWLSETPEVAGSKGWDGACERVASWVLLKDKETLREVFFINTHL---DHVGVEA 170

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-LI 235
                +LL ++A  L            P V+ GDFN +       +      + +     
Sbjct: 171 RREGVNLLLERAYKLAK--------DAPIVLTGDFNAEPESDVIFNVINPEKERHLLSTH 222

Query: 236 RFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              +E         +        +  IDY  +             +   Y    +K  G+
Sbjct: 223 EVAQEVKGTNWTFHDYDRLDINKREYIDYIFVS---------APVTVKSYEVLPMKYEGQ 273

Query: 291 RLSDHCPISIDYDF 304
            +SDHCP+  + +F
Sbjct: 274 FVSDHCPVVANIEF 287


>gi|257458794|ref|ZP_05623917.1| putative endonuclease/exonuclease/phosphatase [Campylobacter
           gracilis RM3268]
 gi|257443782|gb|EEV18902.1| putative endonuclease/exonuclease/phosphatase [Campylobacter
           gracilis RM3268]
          Length = 453

 Score =  121 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 102/307 (33%), Gaps = 47/307 (15%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSE---------QEGVSLWKNSVKRTTSDYTL 56
           VLAL+F +  C AS A+ +++ S+N+  L +            +     S ++       
Sbjct: 3   VLALLFAMFFCGASAAE-LKIASFNVQNLFDGVNDGTEYADFEIGRGGWSEQKYERKLQE 61

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +      L+ADI+ LQE+ +   +  +  K  +  +  +      +           +AV
Sbjct: 62  IADEISALNADILGLQEIENEAVLKALAQKAGYKFYAFSRAQTAPA----------GVAV 111

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +     Q++Y     K        R  +     + G       +H+ S     S    
Sbjct: 112 MSRIPIKFQKTYRPTELK-------TRDILRADFALGGTDFSFYVVHMLSARNPLSERKR 164

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                            ++ +  +     ++AGDFN         ++  +    +D    
Sbjct: 165 N--------------FAFLREVLQGHQRAIVAGDFNTNFGRNSLLNELIERDGFSDLWAL 210

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            P  +     + ++  +   +D+ ++  + +      S       +  + ++    SDH 
Sbjct: 211 HPCSQLKHFGSCESHESGAVLDHILLSDDFF------SNEPGYKKDSFVVAKSSTASDHF 264

Query: 297 PISIDYD 303
           PIS    
Sbjct: 265 PISFILT 271


>gi|182414598|ref|YP_001819664.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
 gi|177841812|gb|ACB76064.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
          Length = 313

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 96/312 (30%), Gaps = 25/312 (8%)

Query: 3   RKYVLALVFFLVPCTASV---AQKVRLVSWNINTLSEQEGVSLWKNSV--KRTTSDYTLL 57
           R   +A  +       +    A  + L ++N+        ++         +  +    L
Sbjct: 12  RSLNVAAFWLACVVGVASVLRADSLTLATYNVENYVATNRMTEDGFRRDYPKPEAQKRAL 71

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           R+    +DADIV LQE+G    + ++                 H+   +  D     A+ 
Sbjct: 72  RRVLLAIDADIVVLQEIGDEPYLHELRRDLAKSGL-----DYPHATLLAAADPDRHQALL 126

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            K   +    +  L      +     R  +E+ V  +  ++ +  +HLKS     +    
Sbjct: 127 SKRPLLAVTPHARLEFPYLGATEAVKRGLLEVRVATSAGELTIFAVHLKSRF---TERAD 183

Query: 177 YSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
            S S      +A  ++D +           FVI GDFN             +      SL
Sbjct: 184 DSQSELRRVGEATAIRDVVLARMGDPGNARFVILGDFNDDKASKPVQRLLQRGSVRIASL 243

Query: 235 IRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                +           R      +D+ ++       + Q        +  +        
Sbjct: 244 -LPVSDSRGDTWTYHYRRRDSYTRVDHILVSPALAPAVAQHRAWIADLDGVNE------A 296

Query: 293 SDHCPISIDYDF 304
           SDH P+ +  DF
Sbjct: 297 SDHRPVVVKLDF 308


>gi|256820874|ref|YP_003142153.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM
           7271]
 gi|256582457|gb|ACU93592.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM
           7271]
          Length = 274

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 90/302 (29%), Gaps = 32/302 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++  +  L       T S+AQ + ++++NI     Q+GV+ W +           +    
Sbjct: 1   MKPLLFILCVL---PTFSIAQDLTVMTYNIRCEVPQDGVNAWTDGN-----RKEKVFTVL 52

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              + DI  +QE   +          T+            +   S               
Sbjct: 53  TEANPDIFGVQEALPHQLKFLEERFPTYQREGVGRDDGKGAGEHSAIFFKKGRFTLLDKG 112

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                  P + +    +   NR    + ++      WV ++H     F    +     S 
Sbjct: 113 NFWLSQTPEVPSLGWDATCCNRICSWVKLKDKKTIFWVFNLH-----FDHEGKVAQVQSA 167

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L+ Q+ + +              ++ GDFN    +        +  D   S        
Sbjct: 168 DLVLQKIKEIAK--------GGKVILMGDFNLPTEHPAVQKIASQLYDTQLSPTNKTPN- 218

Query: 242 DSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               NA K     K  ID+  +         Q+S     Y   + +  G   SDH P+ +
Sbjct: 219 MGTFNAFKTDEPLKGHIDFIFV---------QKSIKVKQYKIIETRIDGLYPSDHLPVWV 269

Query: 301 DY 302
           + 
Sbjct: 270 EL 271


>gi|282878202|ref|ZP_06286998.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281299620|gb|EFA91993.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 305

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/320 (10%), Positives = 80/320 (25%), Gaps = 34/320 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++KY L L+F  +      +Q + + ++NI   +  +                 ++    
Sbjct: 1   MKKYTLTLLFMAI-TLCVSSQNLFVGTYNIRNDNSDDRKEGNA-----WPKRCQVICDMM 54

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI   QE+            + +            +   S          R    
Sbjct: 55  NFEQPDIFGTQEVLVGQLRDLKQGLDGYDCIGVGRDDGKEAGEYSAIFYKKDKLKRLDYG 114

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                  P   A   +  A  R       +    K+     +L                 
Sbjct: 115 NFWLNETPDKPAL-GWDAACIRICTWGKFQDVKTKLKFYFFNLHMDHVG----------V 163

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
               + A+ +   I +   S  P ++ GDFN   +           +  +       +  
Sbjct: 164 VARREAAKLVVRKIKEIAGSNAPVILTGDFNVDQHDEIYQIFTQSGLLKDSYTAARMRFA 223

Query: 242 DSRCNANKNLR--NKIPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRG------- 289
           ++               ID+  +          ++   +     + +  K          
Sbjct: 224 ENGTFQGFKSSLLTDSRIDHVFVSNKFQVNQYGILTNGYWTEGTSREVSKEGAAPQELNF 283

Query: 290 -----KRLSDHCPISIDYDF 304
                +  SDH P+ +  ++
Sbjct: 284 RQYVHRLPSDHYPVMVKLNY 303


>gi|255692701|ref|ZP_05416376.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           finegoldii DSM 17565]
 gi|260621535|gb|EEX44406.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           finegoldii DSM 17565]
          Length = 317

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 87/326 (26%), Gaps = 37/326 (11%)

Query: 1   MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M  K +L +            +        + S+N+   +  + +             Y 
Sbjct: 1   MKLKSLLLITLVTTIVFCGCQSNYQPTTFTVASYNLRNANGNDSLHGNG-----WGQRYP 55

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           ++ +  +  D DI   QE   +           +                S     T   
Sbjct: 56  VIAKMVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKIQGEHSAIFYRTDKF 115

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
              +         P + +K  +     R       +        L  +L         + 
Sbjct: 116 DIIEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKK 171

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSL 234
               S  L+ ++ + L           +P ++ GDFN    +   N    K  +  +   
Sbjct: 172 ARVESAYLVQEKMKELGK------GKNLPAILTGDFNVDQTHQSYNAFVEKGVLCDSYEK 225

Query: 235 IRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFL---------------IQESFSEI 278
             F    +   N+       K  ID+  +    +                   +E+ ++ 
Sbjct: 226 CDFRYATNGTFNSFDPNSFTKSRIDHVFVSPAFHVKRYGILTDTYRSIVGNGEKENANDC 285

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304
               D    + +  SDH P+ ++ +F
Sbjct: 286 PEEIDIKAYQARTPSDHFPVKVELEF 311


>gi|237715231|ref|ZP_04545712.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|237719602|ref|ZP_04550083.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229444540|gb|EEO50331.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229450871|gb|EEO56662.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 314

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 87/325 (26%), Gaps = 39/325 (12%)

Query: 2   IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           ++  +L  +  +V C   +      + + S+N+   +  + ++            Y ++ 
Sbjct: 1   MKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 55

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           Q  +  D DI   QE   +           +                S     T      
Sbjct: 56  QIVQYHDFDIFGTQECFIHQLKDIKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 115

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +         P + +K  +     R       +        L  +L         +    
Sbjct: 116 EKGDFWLSKTPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 171

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSL 234
            S  L+  + + L           +P ++ GDFN    +   +    K +          
Sbjct: 172 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 225

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------IQESFSEIL 279
                   +  + N        ID+  +  +                     ++  ++  
Sbjct: 226 RYAINGTFNDFDPNSFTE--SRIDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQANDCP 283

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
              D    + +  SDH P+ ++ +F
Sbjct: 284 EEIDIKTYQARTPSDHFPVKVELEF 308


>gi|160885625|ref|ZP_02066628.1| hypothetical protein BACOVA_03628 [Bacteroides ovatus ATCC 8483]
 gi|156109247|gb|EDO10992.1| hypothetical protein BACOVA_03628 [Bacteroides ovatus ATCC 8483]
          Length = 316

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 90/323 (27%), Gaps = 35/323 (10%)

Query: 2   IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           ++  +L  +  +V C   +      + + S+N+   +  + ++            Y ++ 
Sbjct: 3   LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 57

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           Q  +  D DI   QE   +           +                S     T      
Sbjct: 58  QIVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 117

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +         P + +K  +     R       +        L  +L         +    
Sbjct: 118 EKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 173

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S  L+  + + L           +P ++ GDFN    +   +    K +  +       
Sbjct: 174 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 227

Query: 239 KEKDSRCNANKNLRNK--IPIDYFVMDQNAYKFL---------------IQESFSEILYN 281
           +   +    N +  +     ID+  +  +                     ++  ++    
Sbjct: 228 RYAINGTFNNFDPNSFTESRIDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEE 287

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
            D    + +  SDH P+ ++ +F
Sbjct: 288 IDIKTYQARTPSDHFPVKVELEF 310


>gi|154149223|ref|YP_001406798.1| putative endonuclease/exonuclease/phosphatase [Campylobacter
           hominis ATCC BAA-381]
 gi|153805232|gb|ABS52239.1| putative endonuclease/exonuclease/phosphatase [Campylobacter
           hominis ATCC BAA-381]
          Length = 437

 Score =  119 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 100/309 (32%), Gaps = 50/309 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTSDY 54
           +RK +  L+FF        A ++++ ++N+  L +                + ++ +   
Sbjct: 1   MRKILAILLFFTFAF----ASELKIATYNVENLFDAKVQGSEYNDFKNGNWNAEKYSFKL 56

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                  K LDADIV LQE+ ++  +  +  K+ +  +  ++         S+ +    +
Sbjct: 57  EKTVDVLKRLDADIVALQEIENFEVLKDLAQKSGYKFYKFSK---------SDKNSPFGV 107

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           AV  +        YP            +R  +       G+   +            +  
Sbjct: 108 AVLSRIKIKDTIFYPPP------LNIKSRDILRCDFTFEGENFSIFV----------NHF 151

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                + S     A  L   +   K      V+ GDFN         +D     +  D  
Sbjct: 152 LAKKNAYSKRIANATQLSSVLRNVKN----VVVLGDFNTNYGSDSLLNDIINRYNLVDLW 207

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P  +        + ++   ID+ ++ Q+ +   +  ++ +  +          + SD
Sbjct: 208 KFLPSIER------ISHQSGRAIDHILLSQDFF-KNVTLNYKDESFGV---FDENFKNSD 257

Query: 295 HCPISIDYD 303
           H PI     
Sbjct: 258 HLPIFFTIS 266


>gi|29348040|ref|NP_811543.1| hypothetical protein BT_2630 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|260172059|ref|ZP_05758471.1| hypothetical protein BacD2_09356 [Bacteroides sp. D2]
 gi|293371640|ref|ZP_06618051.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|315920369|ref|ZP_07916609.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|29339942|gb|AAO77737.1| conserved hypothetical protein with
           endonuclease/exonuclease/phosphatase family domain
           [Bacteroides thetaiotaomicron VPI-5482]
 gi|292633337|gb|EFF51907.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|313694244|gb|EFS31079.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 316

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 87/325 (26%), Gaps = 39/325 (12%)

Query: 2   IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           ++  +L  +  +V C   +      + + S+N+   +  + ++            Y ++ 
Sbjct: 3   LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 57

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           Q  +  D DI   QE   +           +                S     T      
Sbjct: 58  QIVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 117

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +         P + +K  +     R       +        L  +L         +    
Sbjct: 118 EKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 173

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSL 234
            S  L+  + + L           +P ++ GDFN    +   +    K +          
Sbjct: 174 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 227

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------IQESFSEIL 279
                   +  + N        ID+  +  +                     ++  ++  
Sbjct: 228 RYAINGTFNDFDPNSFTE--SRIDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQANDCP 285

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
              D    + +  SDH P+ ++ +F
Sbjct: 286 EEIDIKTYQARTPSDHFPVKVELEF 310


>gi|325915043|ref|ZP_08177372.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538741|gb|EGD10408.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937]
          Length = 288

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 78/297 (26%), Gaps = 29/297 (9%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            L   L    A+ +  +R++S+N+        V +  +  KR       +    +    D
Sbjct: 19  VLCIVLPALAATPSAPLRVMSFNVR-------VPVDTDGDKRWQVRRDAMVALIRQTHPD 71

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +   QE+    A        T+  F                   + +    ++       
Sbjct: 72  VFGTQELVQEQAQYLATHLPTYRWFGKGRNADG-GGEHMGVFYDSRVLTVVESGDFWLSE 130

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            P      S+     R     L E  G K      +                       Q
Sbjct: 131 TPGTPGSSSWGTDLPRLVTWALFERRGDKRRFYLFNTHLPHRDQDEPARE---------Q 181

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           A  L      K  + +P V+ GDFN   +              +       +        
Sbjct: 182 AARLILSRIAKLPADIPVVLTGDFNSDPDKSTY--PTLTAALGDARTHAPKRNGPENTFQ 239

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           + +      ID+ +              +   +   D +  G   SDH P+  ++D+
Sbjct: 240 DFSTHPTRRIDWILFRG----------LTPTRFTTLDERPGGILPSDHYPVLAEFDW 286


>gi|120553053|ref|YP_957404.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8]
 gi|120322902|gb|ABM17217.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8]
          Length = 586

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 79/311 (25%), Gaps = 27/311 (8%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQYAKNLDADIV 69
                   +R+++ N+      +G      +       ++  +    L +  ++   DI+
Sbjct: 273 APTKSTDSIRIMTLNLQNYFNGDGQGKGFPTPRGASSLEQFQTQNRKLARTIQDAHPDIL 332

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            + E+ +                 +   ++    RD N+ I TA+  R+  V   + + P
Sbjct: 333 AVTELENDGYGPDSAAAGLARTLGADWAVVQTPGRDGNDAIRTALLYRESRV---RPTGP 389

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS--------C 181
                       +R  +       G ++    +                           
Sbjct: 390 AYRPGPGELPGASRPPLAQAFRARGSELTFWVVVPHLKSKSCRHAAAREQDQGDGQGCYN 449

Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              +  A  +  W+          P +I GD N                           
Sbjct: 450 RQRTLSANAIVIWLQALAGDPETTPVLITGDLNSYAREAPVERFQEAGFTSLVHQYYPCL 509

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------KR 291
                    +    K  +DY +       ++ Q     I  +E    S           R
Sbjct: 510 PMQCEHYTYRYQGQKGTLDYALASPALMPWIEQAQIWNINADEPRALSYRQTPDQSGPWR 569

Query: 292 LSDHCPISIDY 302
            SDH P+  D 
Sbjct: 570 SSDHNPVLTDL 580


>gi|262405075|ref|ZP_06081625.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643581|ref|ZP_06721385.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294808680|ref|ZP_06767414.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|262355950|gb|EEZ05040.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292641076|gb|EFF59290.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294444119|gb|EFG12852.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 316

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 87/325 (26%), Gaps = 39/325 (12%)

Query: 2   IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           ++  +L  +  +V C   +      + + S+N+   +  + ++            Y ++ 
Sbjct: 3   LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 57

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           Q  +  D DI   QE   +           +                S     T      
Sbjct: 58  QIVQYHDFDIFGTQECFIHQLKDIKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 117

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +         P + +K  +     R       +        L  +L         +    
Sbjct: 118 EKGDFWLSKTPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 173

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSL 234
            S  L+  + + L           +P ++ GDFN    +   +    K +          
Sbjct: 174 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 227

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------IQESFSEIL 279
                   +  + N        ID+  +  +                     ++  ++  
Sbjct: 228 RYAINGTFNDFDPNSFTE--SRIDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQANDCP 285

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
              D    + +  SDH P+ ++ +F
Sbjct: 286 EEIDIKTYQARTPSDHFPVKVELEF 310


>gi|188584031|ref|YP_001927476.1| endonuclease/exonuclease/phosphatase [Methylobacterium populi
           BJ001]
 gi|179347529|gb|ACB82941.1| Endonuclease/exonuclease/phosphatase [Methylobacterium populi
           BJ001]
          Length = 283

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 82/287 (28%), Gaps = 41/287 (14%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            + ++ +RL+++N+      +G                 + +    L+ DIV LQE+   
Sbjct: 27  PAGSRPLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALEPDIVALQEVDVG 75

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A      +              H       +     A+       L+++  L G     
Sbjct: 76  RARTGGLDQAEAIARLVGMSSHFHPALHV-EEERYGDALLTHLPSRLRRADALPGLVRRP 134

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWI 195
                R A+   + +   ++ VL  H                  +    QA+ L   DW+
Sbjct: 135 G-LEPRGALWAEITVGTARLQVLTTHFGLLG-------------AERIAQAEALLGPDWL 180

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                   P V+ GDFN             + +     L    + +     +  +    +
Sbjct: 181 -GDPACREPVVLLGDFNATGWSRAYRR-LGRRLTDARRLTGERRWRRGTA-SFPSRLPLL 237

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+  + +      I                  +  SDH P+  + 
Sbjct: 238 RIDHVFVSEGVRVDRIAV----------VDTPLARLASDHLPVLAEI 274


>gi|289663955|ref|ZP_06485536.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. vasculorum NCPPB702]
 gi|289667545|ref|ZP_06488620.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 288

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 99/301 (32%), Gaps = 33/301 (10%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +LAL   L    AS    +R++S+N+        V + ++  KR     T +    K   
Sbjct: 17  ILALCITLPAFAASAPSPLRVMSFNVR-------VPVDRDGDKRWAVRRTSMVALIKQTH 69

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D+   QE+    A         +  F    R     +         A++V +     L 
Sbjct: 70  PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSEEHMGVFYDSNALSVIESGDFWL- 128

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              P +    S++    R     L E   + ++ ++L+ HL                 + 
Sbjct: 129 SETPEVPGSSSWNTDLPRMVTWALFERRSDKRRFYLLNTHLPH----------RDQDEAA 178

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             Q A+ +   I     + +P V+ GDFN   +           +  +        +   
Sbjct: 179 REQGARVILSRIAT-LPADIPVVVTGDFNSDPDQGTYR--TLTAVLGDARAHVAKPQGPE 235

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +   +   +    ID+ +              +   ++  D++  G   SDH P+  +++
Sbjct: 236 KTFQDFTTQPTRRIDWILFRG----------LTPTRFSTLDMRPGGILPSDHYPVLAEFE 285

Query: 304 F 304
           +
Sbjct: 286 W 286


>gi|228990178|ref|ZP_04150148.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
 gi|228769541|gb|EEM18134.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
          Length = 788

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 87/313 (27%), Gaps = 49/313 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN- 78
            K+ + ++NI   S          + + +      +    K      DI+ +QEM   N 
Sbjct: 489 GKLTVATYNIENFSAN--------AKETSDEKVKAIAYSIKYNLKMPDIIGVQEMQDNNG 540

Query: 79  -----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                               +      +          N        +I          V
Sbjct: 541 SINDGTTDASLSAKRIIDAVQEIRGPKYEYVEVA-PQNNQDGGAPGANIRVGFFYNPSRV 599

Query: 122 RVLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           ++  +       P    +++      R+ +       G+ I V+  HL S     +    
Sbjct: 600 KLADKPKLLETNPTRIGQENSLFDNTRKPLAAEFTFQGQNIVVVSNHLNSKLGDATPFGK 659

Query: 177 YS----PSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                  S     Q AQ   +++ + ++     P VI GD N             + +  
Sbjct: 660 IQPLVLKSEEKRIQLAQEANNFVKEIQKRDVNAPVVIVGDMNDFEFSKP-----LQALKA 714

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            +                 +  N   +D+ ++  N        +  + ++   +I     
Sbjct: 715 ENMQDMLETVSKENRYTYIHDGNAQVLDHILVTNNIA----PHTVVDPVHLNSNIMKEHG 770

Query: 291 RLSDHCPISIDYD 303
           R+SDH P+    D
Sbjct: 771 RVSDHDPVLAQID 783


>gi|228996264|ref|ZP_04155909.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
 gi|229003931|ref|ZP_04161737.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
 gi|228757300|gb|EEM06539.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
 gi|228763456|gb|EEM12358.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
          Length = 788

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 87/313 (27%), Gaps = 49/313 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN- 78
            K+ + ++NI   S          + + +      +    K      DI+ +QEM   N 
Sbjct: 489 GKLTVATYNIENFSAN--------AKETSDEKVKAIAYSIKYNLKMPDIIGVQEMQDNNG 540

Query: 79  -----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                               +      +          N        +I          V
Sbjct: 541 SINDGTTDASLSAKRIIDAVQEIRGPKYEYVEVA-PQNNQDGGAPGANIRVGFFYNPSRV 599

Query: 122 RVLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           ++  +       P    +++      R+ +       G+ I V+  HL S     +    
Sbjct: 600 KLADKPKLLETNPTRIGQENSLFDNTRKPLAAEFTFQGQNIVVVSNHLNSKLGDATPFGK 659

Query: 177 YS----PSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                  S     Q AQ   +++ + ++     P VI GD N             + +  
Sbjct: 660 IQPLVLKSEEKRIQLAQEANNFVKEIQKRDVNAPVVIVGDMNDFEFSKP-----LQALKA 714

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            +                 +  N   +D+ ++  N        +  + ++   +I     
Sbjct: 715 ENMQDMLETVSKENRYTYIHDGNAQVLDHILVTNNIA----PHTVVDPVHLNSNIMKEHG 770

Query: 291 RLSDHCPISIDYD 303
           R+SDH P+    D
Sbjct: 771 RVSDHDPVLAQID 783


>gi|218437404|ref|YP_002375733.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
 gi|218170132|gb|ACK68865.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
          Length = 1073

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 90/312 (28%), Gaps = 41/312 (13%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                ++ + S+N+  L   +       +  R T+    +    K    DI+ LQE+   
Sbjct: 627 TPTTDQLTVASYNVENLDPNDNDGDTDIADGRFTAIAEQIVNNLKT--PDIIALQEVQDN 684

Query: 78  NA----------------VAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKN 120
           +                 +  +         ++    + + S      +I          
Sbjct: 685 DGSVNSNIVDASLTYQTLIDAIVDAGGPRYEFADIPPIDDQSGGQPGANIRVGYLYNPNR 744

Query: 121 VRVLQQ---SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           V ++++           D  +   +R  +      N +++ +++ H  S      L  + 
Sbjct: 745 VDLIEESLTRIEDPNLADGNAFENSRNPLAATFVFNEQEVTLVNNHFASKGGSSPLFGSV 804

Query: 178 SP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
            P    S     +QAQ + ++++           ++ GD N    +          I   
Sbjct: 805 QPPINGSVDQRIEQAQVVNNFVSNILGSNPDANAIVLGDLNEFQFFSPLE------ILQQ 858

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                     ++   +     N   +D+ ++  N       +                 +
Sbjct: 859 TLNNLTFSLPENERYSYIFEGNSQQLDHILVSDNLLNSAEFDIVHI-------NSQFADQ 911

Query: 292 LSDHCPISIDYD 303
            SDH P+   ++
Sbjct: 912 TSDHDPLLARFN 923


>gi|299147485|ref|ZP_07040550.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
 gi|298514763|gb|EFI38647.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
          Length = 316

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 88/325 (27%), Gaps = 39/325 (12%)

Query: 2   IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           ++  +L  +  +V C   +      + + S+N+   +  + ++            Y ++ 
Sbjct: 3   LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 57

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           Q  +  D DI   QE   +           +                S     T      
Sbjct: 58  QIVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 117

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +         P + +K  +     R       +        L  +L         +    
Sbjct: 118 EKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 173

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSL 234
            S  L+  + + L           +P ++ GDFN    +   +    K +          
Sbjct: 174 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 227

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------IQESFSEIL 279
                   +  + N        ID+  +  + +                   ++  ++  
Sbjct: 228 RYAINGTFNDFDPNSFTE--SRIDHIFVSPSFHVKKYGVLTDTYRSIVGKGEKKQANDCP 285

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
              D    + +  SDH P+ ++ +F
Sbjct: 286 EEIDIKTYQARTPSDHFPVKVELEF 310


>gi|172039538|ref|YP_001806039.1| hypothetical protein cce_4625 [Cyanothece sp. ATCC 51142]
 gi|171700992|gb|ACB53973.1| hypothetical protein cce_4625 [Cyanothece sp. ATCC 51142]
          Length = 1252

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 88/326 (26%), Gaps = 50/326 (15%)

Query: 22   QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---- 77
              + + ++N+  L   +       +  R  +    +     +   DI+ LQE+       
Sbjct: 801  DNLTIATYNVLNLDPNDNDGDTDVADGRFDTIAQQIINNLNS--PDIIGLQEIQDNSGSV 858

Query: 78   --------NAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
                      + ++           +    +T    N S      +I TA       V V
Sbjct: 859  DDGTVSADQTLQRLVDAIVDAGGPQYEFIDNTFITNNQSGGQPGGNIRTAYLYDPNQVSV 918

Query: 124  LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---- 179
                 P+          G R  + +  E  G+ + V++ H  S      +          
Sbjct: 919  ASVQ-PIGSQVSGEPFNGARLPLAVDFEFQGEIVTVINNHFSSKGGSAPIFGVEQDFAAR 977

Query: 180  --------SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTID 229
                    S +   +QAQ + D++     +      V+ GD N                 
Sbjct: 978  QEDITVNGSLNERREQAQAVNDFVDGVLSNDPNGNVVVLGDLNEFEFVSPLPILEGTLES 1037

Query: 230  PNDSLIRFPKE-----------KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
             N+                    +    +     N   +D+ ++  +            +
Sbjct: 1038 TNNGQETITGGDAVLSNLVNNIAEDERYSFIFQGNSQQLDHILVSDSL---FNNAEIDIV 1094

Query: 279  LYNEDDIKSRGKRLSDHCPISIDYDF 304
              N +   +     SDH P+   + F
Sbjct: 1095 NINSEFAATESL-ASDHDPVLASFTF 1119


>gi|323497286|ref|ZP_08102305.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326]
 gi|323317643|gb|EGA70635.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326]
          Length = 232

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 22/246 (8%)

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           + +D++  QE+    A+ KV  K    +F    +  +  KR  + +  T +A++      
Sbjct: 1   MQSDVLAFQEVNDEAALQKVIGKGYDIVFSDRTQERHTEKRFHDINQFTGVAIKHGI--- 57

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                      D  S +  R A  ++++ N  + I +L +HLK+ C   S     +  C 
Sbjct: 58  -SWQNMPDVLLDQRSNSKLRFATYVVIQPNSERPIHLLSVHLKARC---SGAYKNNRDCR 113

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           +L QQ + L  WI +K+ +   +VI GDFN  ++Y   ND  W T+  ++      +   
Sbjct: 114 ILKQQGERLNQWINEKEVANQAYVILGDFNHNLSY--PNDWLWNTLTQSNRAQLATQRTR 171

Query: 243 SRCN------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           + C        NK    +  ID+ ++       +   +  + +Y    +     +LSDHC
Sbjct: 172 AECKVRSRKQPNKTHSFRSLIDHIIVS----DQIKLSAPKQDVYPSQQVLK--HQLSDHC 225

Query: 297 PISIDY 302
           PI+   
Sbjct: 226 PITAQL 231


>gi|90409692|ref|ZP_01217709.1| hypothetical protein P3TCK_02976 [Photobacterium profundum 3TCK]
 gi|90329045|gb|EAS45302.1| hypothetical protein P3TCK_02976 [Photobacterium profundum 3TCK]
          Length = 292

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 90/310 (29%), Gaps = 25/310 (8%)

Query: 1   MIRKY-VLALVFFLVPCT-ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           M +   +L L    +  +  ++A    ++S+N+   S+        +      +   ++ 
Sbjct: 1   MKKNVSLLTLSLLAISGSLPAIADDFNVMSFNVRN-SKDSVSGSIYDGNNTWENRKKIVT 59

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
               + + DI  LQE  S   +        +          N           +   V+ 
Sbjct: 60  SIFHDQNIDIAGLQEPFSDQIMYLARNLPEYSWVGVGRDDGNAKGEAVPIFYRSDKYVKL 119

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                     P L A   +     R +  + +E  G    VL  +     F    +    
Sbjct: 120 SGGTFWLSKTPELVASIGWDAELTRISTWVRLEEKGTGKRVLVFNSH---FDHIGKVARQ 176

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S  L+S +A+ +        +     ++ GD N +     +        +    + + P
Sbjct: 177 ESAKLMSDRAKEIIG------DGNDAVIVLGDLNFERTDTVSYHAITNLFNDAREITKAP 230

Query: 239 KEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
            +      A             IDY  ++ +          +   +   ++   G   SD
Sbjct: 231 FKGADNGKAYTYHGYGNAPSEDIDYIFVNDSL---------TVNTFEYKNVIRDGIYSSD 281

Query: 295 HCPISIDYDF 304
           H  +  +  F
Sbjct: 282 HLSVISNMSF 291


>gi|218460813|ref|ZP_03500904.1| putative metal-dependent hydrolase protein [Rhizobium etli Kim 5]
          Length = 242

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 83/285 (29%), Gaps = 49/285 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++L+++N+++    +              D   +        ADI+ LQE+       
Sbjct: 4   KSIKLLTYNVHSCIGNDR-----------KLDPGRIASVIAEAGADIIALQEVDVLRRRT 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +          +   H       + +   A+         ++ PL           
Sbjct: 53  GGVDQAHLIASLLKMQAHFHPALSVAEEQY-GDAIITALPTAAVKAGPLPSIG------E 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199
            R A+ + V +  +K+ V++ HL                     +Q   L +  W+   K
Sbjct: 106 QRGALSVEVLVGDRKLLVVNTHLGLRGRD-------------RIRQMTTLLNSGWLRGTK 152

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +  +P ++ GDFN   +           +            K +      +    + +D+
Sbjct: 153 DEPLPCILCGDFNAIPSSATYR------LATRSLKDALLGGKAAPRATFPSRYPLMRLDH 206

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +            +           +  SDH P+  +  F
Sbjct: 207 IFVTDDL----------VVQRATVLQNRLTRVASDHLPLFAEISF 241


>gi|163853725|ref|YP_001641768.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           PA1]
 gi|163665330|gb|ABY32697.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           PA1]
          Length = 328

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 81/289 (28%), Gaps = 41/289 (14%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             ++ ++++RL+++N+      +G                 + +    L  DIV LQE+ 
Sbjct: 74  PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALAPDIVALQEVD 122

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                     +              H       +     AV       L+++ PL G   
Sbjct: 123 VGRPRTDGLDQAEEIARLVGMFSHFHPALHI-EEERYGDAVLTHLPSRLKRAGPLPGLLR 181

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--D 193
                  R A+ + V     K+ V+  H                  +    QA+ L   D
Sbjct: 182 RPG-LEPRGALWVEVTAGASKLQVITTHFGLLG-------------AERVAQAKALLGPD 227

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           W+        P V+ GDFN             +  D           +      ++    
Sbjct: 228 WL-GDPACHAPTVLLGDFNAMGWSRAYRRLSGRLTDARRLTGDRRWRRGGATFPSRFPLL 286

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +D+  + +      I                  ++ SDH P+  + 
Sbjct: 287 --RVDHVFVSERVAVERIAV----------VDTPLARKASDHLPVLAEI 323


>gi|152974643|ref|YP_001374160.1| endonuclease/exonuclease/phosphatase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023395|gb|ABS21165.1| Endonuclease/exonuclease/phosphatase [Bacillus cytotoxicus NVH
           391-98]
          Length = 790

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 90/313 (28%), Gaps = 49/313 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN- 78
            +V + ++N+   S  +         + +      L    K      DI+ +QEM   N 
Sbjct: 489 GRVTVATYNMENFSANQ--------KETSDEKVKALAYSIKYNLKMPDIIGVQEMQDNNG 540

Query: 79  -----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                               +      +        L N        +I          V
Sbjct: 541 TINDGTTDASLSAKRIIDAVQAIHGPKYEYVEVA-PLNNQDGGAPGANIRVGFFYNSSRV 599

Query: 122 RVLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           ++  Q       P    +D+      R+ +       G+ + V+  HL S         +
Sbjct: 600 KLADQPKLLETNPTRIGQDNPLFESTRKPLAAEFTFQGQHLVVISNHLNSKIGDAPPFGS 659

Query: 177 YS----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                  S     Q AQ +  ++   QK+++  P V+ GD N             + +  
Sbjct: 660 IQPLVWKSEEKRVQLAQEVNRFVKGIQKRDANAPVVVVGDMNDFEFSKP-----LQALKG 714

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           +                  +  N   +D+ ++  N        +  + ++   ++     
Sbjct: 715 DTLQNMLETVSKENRYTYIHEGNAQVLDHILVTNNIA----NHTIVDPVHLNTNMMKEHG 770

Query: 291 RLSDHCPISIDYD 303
           R+SDH P+    D
Sbjct: 771 RVSDHDPVLAQID 783


>gi|78045838|ref|YP_362013.1| putative extracellular nuclease [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034268|emb|CAJ21913.1| putative extracellular nuclease [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 572

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 91/324 (28%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+N+       G      +       ++  +    L   
Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315

Query: 61  AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
              LDAD+  L E+ +       AV+++             + ++      ++ I   I 
Sbjct: 316 IVPLDADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIL 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +        G    V+  H KS  C   S 
Sbjct: 376 YRSSQVTPVGKPATLTGGPFENH---SRVPLAQAFRSARGATFVVVANHFKSKGCGNASG 432

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L  W+            V+ GDFN     +        
Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMEMPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L   +   I  +  D  
Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHINADVMDDA 547

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571


>gi|218532583|ref|YP_002423399.1| endonuclease/exonuclease/phosphatase [Methylobacterium
           chloromethanicum CM4]
 gi|218524886|gb|ACK85471.1| Endonuclease/exonuclease/phosphatase [Methylobacterium
           chloromethanicum CM4]
          Length = 328

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 84/289 (29%), Gaps = 41/289 (14%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             ++ ++++RL+++N+      +G                 + +   +L  DIV LQE+ 
Sbjct: 74  PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIADLAPDIVALQEVD 122

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                     +              H       +     AV       L+++ PL G   
Sbjct: 123 VGRPRTDGLDQAEEIARLVGMFSHFHPALHI-EEERYGDAVLTHLPSRLKRAGPLPGLLR 181

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--D 193
                  R A+ + V     K+ V+  H                  +    QA+ L   D
Sbjct: 182 RPG-LEPRGALWVEVTAGASKLQVITTHFGLLG-------------AERVAQAKALLGPD 227

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           W+        P V+ GDFN             + +     L    + +        +   
Sbjct: 228 WL-GDPACHAPTVLLGDFNATGWSRAYRRLSGR-LTDARRLTGERRWRRGGA-TFPSRFP 284

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +D+  + +      I                  ++ SDH P+  + 
Sbjct: 285 LLRVDHVFVSERVAVERIAV----------VDTPLARKASDHLPVLAEI 323


>gi|299534838|ref|ZP_07048167.1| endonuclease yhcR precursor [Lysinibacillus fusiformis ZC1]
 gi|298729683|gb|EFI70229.1| endonuclease yhcR precursor [Lysinibacillus fusiformis ZC1]
          Length = 1375

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 83/328 (25%), Gaps = 60/328 (18%)

Query: 18   ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG 75
              VA K+ + S+NI   S     +               +     N     DI+ L E+ 
Sbjct: 944  EPVADKLNVASYNIENFSNNPANTSN--------EKVARIAATFVNNMKSPDIITLVEVQ 995

Query: 76   SYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
              +                     K      +        + N        +I       
Sbjct: 996  DNDGQTDSGNADASESYMRLIHAIKAAGGPAYDW-IDVMPINNTVGGAPGGNIRVGYLYN 1054

Query: 118  KKNVRVLQ----------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
               V ++                       G  D       R+ +    E   +++ ++ 
Sbjct: 1055 PNRVSLVSGIKGMGDQTNTWTADGSLTLNPGFVDPSKFVDTRKPIAAEFEFQKERVVIIG 1114

Query: 162  IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
             HL S     SL          S     Q AQ + D+I +       +  ++AGD N   
Sbjct: 1115 AHLNSKGGDGSLWGPTQPPVLESVKKRIQLAQAINDFIDEGLAINPDLNIIVAGDMNDF- 1173

Query: 216  NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                      +T+  +       K  +          N   +D+ ++          +  
Sbjct: 1174 ----EFTPALQTLKGDVLTNMIDKAPEQDRFTYFFQGNNQVLDHILVSNKLADVTEIDLI 1229

Query: 276  SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    +      R SDH P+ +  D
Sbjct: 1230 HI----NANFTEAQGRASDHDPVLVQID 1253


>gi|294627625|ref|ZP_06706207.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666886|ref|ZP_06732117.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292597977|gb|EFF42132.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603334|gb|EFF46754.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 287

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 34/300 (11%)

Query: 8   ALVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           AL+   +P  A + A  +R++S+N+        V    +  KR       +    K    
Sbjct: 17  ALLCIALPALAGTPAAPLRVMSFNVR-------VPADTDGDKRWQVRRAAMVALIKQTHP 69

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+   QE+ S  A         +  F    R  +  +          +    ++      
Sbjct: 70  DVFGTQELVSEQAAFLAEQLPDYRWFGQGRRGDDSDEHM-GVFYDARVLEVVESGNFWLS 128

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             P      ++     R A   L E   + ++ ++ + H       D  E     S  L+
Sbjct: 129 DTPERAGSITWGNVLPRMATWALFERRSDKRRFYLFNTHFPYR---DEDEPARERSARLI 185

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             +   L         + +P V+ GDFN   +           +  +       +     
Sbjct: 186 LSRIAQL--------PATIPVVLTGDFNSDPD--KITYPTLTAVLRDARAQASKRSGPEN 235

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +        ID+ +                  +   D +  G   SDH P+  ++D+
Sbjct: 236 TFQDFTTHPTRRIDWILYRG----------LRPSRFATLDDRPGGILPSDHYPVMAEFDW 285


>gi|332709465|ref|ZP_08429426.1| putative extracellular nuclease [Lyngbya majuscula 3L]
 gi|332351724|gb|EGJ31303.1| putative extracellular nuclease [Lyngbya majuscula 3L]
          Length = 713

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 90/313 (28%), Gaps = 34/313 (10%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +    S A ++ + S+N+  L              +  +    L    ++   DI+ LQE
Sbjct: 254 ITNLVSSANQLTIASFNVENLDPNSQDGDDDIGDGKFNAIAFQLINNLQS--PDIIALQE 311

Query: 74  MGSYNAV-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +   N                   A V        F+    +          +I      
Sbjct: 312 VQDNNGTIDNGNVDARETYETLINAIVAAGGPQYSFFDIPPVDRQDGGQPGGNIRVGYLY 371

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
               V +   S   +G  ++      R+++    E NG+ I V++ H  S    D L   
Sbjct: 372 NPNRVTINTDSAQRIGVGETAFDN-TRKSLLTEFEFNGETISVINNHFSSKGGSDPLFGE 430

Query: 177 YSP----SCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
             P         +QQAQ + D++      +     ++ GDFN             K    
Sbjct: 431 NQPPQNGQEQKRNQQAQIVNDFVDTILTNDPDANVLVLGDFNTFDFEEPLE--TLKGYHN 488

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           +          +          N   +D+ ++  +      +     +            
Sbjct: 489 SVLTNLTETLPEDERYTFIFEGNSQALDHILVSDHLVDAGAEYDIVHVN------SEFAD 542

Query: 291 RLSDHCPISIDYD 303
           + SDH PI   + 
Sbjct: 543 QASDHDPILARFT 555


>gi|213962631|ref|ZP_03390892.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sputigena
           Capno]
 gi|213954626|gb|EEB65947.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sputigena
           Capno]
          Length = 274

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 90/302 (29%), Gaps = 32/302 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +++ +  L         +VAQ + ++++NI   +  +GV+ W             +    
Sbjct: 1   MKQLLFILCIL---PALTVAQNLSVMTYNIRYDNSYDGVNSWTEGN-----RKEKVFTII 52

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            + + DI  +QE  ++          ++            +   S         V     
Sbjct: 53  NDANPDIFGVQEALAHQLKFLEERFPSYQREGVGRDDGKEAGEHSAIFFKKNRFVLLDKG 112

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                  P + +    +   NR    + ++      WV ++H     F    +     S 
Sbjct: 113 NFWLSQTPDVPSLGWDAICCNRICSWVKLKDKKTIFWVFNLH-----FDHEGKVAQIQSA 167

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L+ ++ + +              ++ GDFN    +        +  D   S        
Sbjct: 168 DLVLRKIKEIAK--------NGKVILMGDFNLPTEHPAVQKIASQLYDTQLSPTNKTPN- 218

Query: 242 DSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               NA K     K  ID+  +         Q+S     Y   + +      SDH P+ +
Sbjct: 219 MGTFNAFKTDEPLKGHIDFIFV---------QKSIKVKQYKIIETRIDSLYPSDHLPVWV 269

Query: 301 DY 302
             
Sbjct: 270 QL 271


>gi|32475548|ref|NP_868542.1| hypothetical protein RB8783 [Rhodopirellula baltica SH 1]
 gi|32446090|emb|CAD75919.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 321

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 87/288 (30%), Gaps = 32/288 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             +    +++NI  L+  +   L      R +     +        AD+V LQE+     
Sbjct: 60  ADESFTAMTYNIRYLNTHDRQDL---WSMRRSKVIETIAS------ADVVGLQEVTVQQL 110

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    W  +             +             +  +     P +     +  
Sbjct: 111 HDIQEGTPEWTWYGVGRDDGKEGGEFAPIGYRHDRFEAMDHGTLWLSETPTVVGSKGWDA 170

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           A  R    +++    +K+   +  + +  F    +N    S  L++ +           +
Sbjct: 171 ALPRTMTWMVLR---RKLDRAEFLVINSHFDHRGQNAREQSGRLVAAEVDQ--------R 219

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            + +P ++ GDFN   +             K +D  D +   P       N  K ++   
Sbjct: 220 ATDLPVIVMGDFNAMPDSAPLKALQSGEKVKLLDARDEVDGKPTGPTGTWNGFKAIQPDR 279

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ID+ +++             +     D     G+  SDH PI+I  D
Sbjct: 280 RIDHVLVNDRV--------VVQEYRTLDPRTEAGRYASDHLPIAIRID 319


>gi|295088164|emb|CBK69687.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A]
          Length = 316

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 89/325 (27%), Gaps = 39/325 (12%)

Query: 2   IRKYVLALVFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           ++  +L  +  +V C   +      + + S+N+   +  + ++            Y ++ 
Sbjct: 3   LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLRNANGGDSINGNG-----WGQRYPVIA 57

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           Q  +  D DI   QE   +          ++                S     T      
Sbjct: 58  QIVQYHDFDIFGTQECFIHQLKDMKEALPSYDYIGVGRDDGKEKGEHSAIFYRTDKFDVI 117

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +         P + +K  +     R       +        L  +L         +    
Sbjct: 118 EKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKARV 173

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSL 234
            S  L+  + + L           +P ++ GDFN    +   +    K +          
Sbjct: 174 ESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKAGF 227

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------IQESFSEIL 279
                   +  + N        ID+  +  + +                   ++  ++  
Sbjct: 228 RYAINGTFNDFDPNSFTE--SRIDHVFVSPSFHVKKYGVLTDTYRSIVGKGEKKQANDCP 285

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
              D    + +  SDH P+ ++ +F
Sbjct: 286 EEIDIKTYQARTPSDHFPVKVELEF 310


>gi|319785687|ref|YP_004145162.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
 gi|317464199|gb|ADV25931.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
          Length = 575

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 97/315 (30%), Gaps = 33/315 (10%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADI 68
           P    V   +++ ++N+  L   +G      + +         +    L      LD DI
Sbjct: 267 PQPPRVPGTLKVAAFNLENLFNGDGRGGGFPTKRGARTHAAMQAQLAKLVATVHGLDPDI 326

Query: 69  VFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
             L E+ +      +++A++          +  R ++       + I   +  R   V  
Sbjct: 327 AALMELENDGYGPESSIAQLVDALNADG--AQWRFVDAGHGPGGDTIRVGLIYRADRVVA 384

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---- 179
             +   L G      R+    A   + +   + + V+  HLKS    ++           
Sbjct: 385 RGEPAVLEGGPFG-ERSRVPLAQAFVRKGGKRDLVVVANHLKSKGCSEATGADADRGDGQ 443

Query: 180 --SCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               +L +  A+ L  W+            V+ GDFN         D           + 
Sbjct: 444 GCWNALRTDSARRLHAWLKTHPVGSRAGRVVMLGDFNA----YAMEDPLHWLRSEGGWVD 499

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
            F      R  +         +D+ ++  +    L   +   +  +E D           
Sbjct: 500 AFAAAGIERPWSYVYDGLSGRLDHALLSPSLVPALRGAAEWHVNADEPDDAGYAGRNEPG 559

Query: 290 -KRLSDHCPISIDYD 303
             R SDH P+ + +D
Sbjct: 560 PWRSSDHDPLLLGFD 574


>gi|94994049|ref|YP_602147.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10750]
 gi|94547557|gb|ABF37603.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10750]
          Length = 910

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YADIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|21910025|ref|NP_664293.1| hypothetical protein SpyM3_0489 [Streptococcus pyogenes MGAS315]
 gi|28896277|ref|NP_802627.1| hypothetical protein SPs1365 [Streptococcus pyogenes SSI-1]
 gi|21904215|gb|AAM79096.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
 gi|28811528|dbj|BAC64460.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 910

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNVAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|329913211|ref|ZP_08275907.1| hypothetical protein IMCC9480_1123 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545407|gb|EGF30623.1| hypothetical protein IMCC9480_1123 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 611

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 94/307 (30%), Gaps = 32/307 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNA 79
              +R+ S N+       G     ++++ +      L      LDAD++ L E+ +   A
Sbjct: 308 GGTLRVASMNVLNYFTTLGARGAGSALELSRQR-DKLVAAIAGLDADVLGLMEIENNPAA 366

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +A +       +  +T   I+     S+  I  A+  +   V  L     L   +     
Sbjct: 367 LADLVGALNARLGDNTYAAIDSGVPGSDV-IKVALIYKPARVLTL-GPRELPPTRGFLVD 424

Query: 140 AGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLSQQAQWL 191
            G R  +        N    W++  HLKS     S   +           +  S+QA  L
Sbjct: 425 GGVRPPLAQHFAARDNNGSFWMVLSHLKSKSSCPSDTRSIERDRGQGCWNAARSRQAGAL 484

Query: 192 KDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             W+            ++ GDFN  ++         +TI+         +   +   +  
Sbjct: 485 LQWVDTLVARSGDGDVLMLGDFNAYLDEDPI-----RTIEAAGHADLLRRLPPAERYSYV 539

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------KRLSDHC 296
                  +D+    +     +   +      +E  +                  R SDH 
Sbjct: 540 FAGMAGALDHGFASRTLAPHVSGVTIWHANADEPAVLDYNTESKPDDRYAATPWRASDHD 599

Query: 297 PISIDYD 303
           P+ +   
Sbjct: 600 PVLVGLT 606


>gi|306827643|ref|ZP_07460923.1| endonuclease/exonuclease/phosphatase [Streptococcus pyogenes ATCC
           10782]
 gi|304430206|gb|EFM33235.1| endonuclease/exonuclease/phosphatase [Streptococcus pyogenes ATCC
           10782]
          Length = 910

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|139474060|ref|YP_001128776.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes str. Manfredo]
 gi|134272307|emb|CAM30561.1| endonuclease/exonuclease/phosphatase family surface anchored
           protein [Streptococcus pyogenes str. Manfredo]
          Length = 910

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|94990135|ref|YP_598235.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10270]
 gi|94543643|gb|ABF33691.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10270]
          Length = 910

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|94988256|ref|YP_596357.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS9429]
 gi|94992130|ref|YP_600229.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS2096]
 gi|94541764|gb|ABF31813.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS9429]
 gi|94545638|gb|ABF35685.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS2096]
          Length = 910

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|50913934|ref|YP_059906.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10394]
 gi|50903008|gb|AAT86723.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10394]
          Length = 910

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|78046289|ref|YP_362464.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78034719|emb|CAJ22364.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 287

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 85/298 (28%), Gaps = 30/298 (10%)

Query: 8   ALVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           AL+   +P  A + A  +R++S+N+        V    +  KR       +    K    
Sbjct: 17  ALLCIALPALAVTPAAPLRVMSFNVR-------VPADTDGDKRWQVRRAAMVALIKQTHP 69

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+   QE+ S  A         +  F    R  +  +          +    ++      
Sbjct: 70  DVFGTQELVSEQAAFLAEQLPDYRWFGQGRRGDDSDEHM-GVFYDARVLQVVESGNFWLS 128

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             P      ++     R A   L E    K      +       +        +  +LS+
Sbjct: 129 DTPERAGSITWGNVLPRMATWALFERRSDKSRFYLFNTHFPYRDEDEPARERSARLILSR 188

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            AQ           + VP V+ GDFN   +           +  +       +       
Sbjct: 189 IAQ---------LPATVPVVLTGDFNSDPD--KITYPTLTAVLRDARAQASKRSGPENTF 237

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +        ID+ +                  +   D +  G   SDH P+  ++D+
Sbjct: 238 QDFTTHPTRRIDWILYRG----------LRPTRFATLDDRPGGILPSDHYPVMAEFDW 285


>gi|19745837|ref|NP_606973.1| hypothetical protein spyM18_0808 [Streptococcus pyogenes MGAS8232]
 gi|19747984|gb|AAL97472.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 910

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 89/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K      +  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPAYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|325925887|ref|ZP_08187256.1| putative extracellular nuclease [Xanthomonas perforans 91-118]
 gi|325543718|gb|EGD15132.1| putative extracellular nuclease [Xanthomonas perforans 91-118]
          Length = 572

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 91/324 (28%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+N+       G      +       ++  +    L   
Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315

Query: 61  AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
              LDAD+  L E+ +       AV+++             + ++      ++ I   I 
Sbjct: 316 IVPLDADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIL 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +        G    V+  H KS  C   S 
Sbjct: 376 YRSSQVTPVGKPATLTGGPFENH---SRVPLAQAFRSARGATFVVVANHFKSKGCGNASG 432

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L  W+            V+ GDFN     +        
Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMEMPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L   +   I  +  D  
Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHINADVMDDA 547

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLAFS 571


>gi|126650018|ref|ZP_01722251.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp.
            B14905]
 gi|126593190|gb|EAZ87152.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp.
            B14905]
          Length = 1275

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 90/328 (27%), Gaps = 60/328 (18%)

Query: 18   ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG 75
              VA K+ + S+NI   S     +               +           DI+ L E+ 
Sbjct: 844  EPVADKLNVASYNIENFSNNPANTSN--------EKVDRIAATFVKNMKSPDIITLVEVQ 895

Query: 76   SYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
              +                     K      +        + N        +I       
Sbjct: 896  DNDGQIDSGNADASESYMRLINAIKAAGGPAYDW-IDVMPINNTVGGAPGGNIRVGYLYN 954

Query: 118  KKNVRVLQQSY----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
               V ++  +                    G  D    A  R+ +    +   + + ++ 
Sbjct: 955  PTRVSLVTGTKGAGDQANGWTADGSLALNPGFVDPTKFADTRKPIAAEFKFQEEHVVIIG 1014

Query: 162  IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
             HL S     SL          S +   Q AQ + D+I +       +  ++AGD N   
Sbjct: 1015 AHLNSKGGDGSLWGPTQPPVLESVTKRLQLAQAINDFIDEGLAINPDINIIVAGDMNDF- 1073

Query: 216  NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                      +T+  +       K  ++         N   +D+ ++  N        + 
Sbjct: 1074 ----EFTPALETLKGDVLTNMVDKAPETDRFTYFFQGNNQVLDHILVSNNLA----NVTA 1125

Query: 276  SEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ++++   +      R SDH P+ +  D
Sbjct: 1126 IDLIHINANFTEAQGRASDHDPVLVQID 1153


>gi|86360979|ref|YP_472866.1| putative metal-dependent hydrolase protein [Rhizobium etli CFN 42]
 gi|86285081|gb|ABC94139.1| putative metal-dependent hydrolase protein [Rhizobium etli CFN 42]
          Length = 242

 Score =  116 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 84/285 (29%), Gaps = 49/285 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++L+++N+++    +              D   +       +ADIV LQE+       
Sbjct: 4   KSIKLLTYNVHSCIGNDR-----------KLDPGRIASVIAEAEADIVALQEVDVLRRRT 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +          +   H       + +   A+         ++ PL           
Sbjct: 53  GGVDQAHVIASLLKMQAHFHPALSIAEEQY-GDAIITALPTGAVKAGPLPSIG------E 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199
            R A+ + + +  +K+ V++ HL                     +Q   L +  W+    
Sbjct: 106 ARGALSIEILVGDRKLLVVNTHLGLRG-------------RERIRQMTTLLNSGWLRGPS 152

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +  VP ++ GDFN   +         +++              +      +    + +D+
Sbjct: 153 DEPVPGILCGDFNAIPSSAT-YRLAARSLTDAQLA-----GSAAPRATFPSRYPLMRLDH 206

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             + +             +           +  SDH P+  +  F
Sbjct: 207 IFVTEGL----------VVQRATVLQTRLTRVASDHLPLLAEISF 241


>gi|157164312|ref|YP_001467079.1| putative endonuclease/exonuclease/phosphatase [Campylobacter
           concisus 13826]
 gi|112800432|gb|EAT97776.1| putative endonuclease/exonuclease/phosphatase [Campylobacter
           concisus 13826]
          Length = 460

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 88/314 (28%), Gaps = 50/314 (15%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSD-------YTL 56
           + AL   +     + A ++ + ++N+  L +   +G          +  D          
Sbjct: 1   MRALFVLVFAVLVAFASEISIATYNVQNLFDCKDDGSEYPDFKSSTSKWDCEAASSKLKR 60

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
            RQ    LD DI+ L+E+ +   +  +   + +     T+   +       + I      
Sbjct: 61  TRQVIDALDTDIIALEEVENEQVLKSLVEGSDYKFIIFTKEKNSPVGLGIVSKIQ----- 115

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                       P             R  ++++ E+ GKK  V   H  ++    +++  
Sbjct: 116 ------------PSSSEIFEVPNVKTRNILKVVFEVEGKKFSVFVNHFPAYKNGINMQKK 163

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                             +     +    ++ GDFN               I        
Sbjct: 164 AER--------------TLRAALGNEQNVIVLGDFNSPYGQKSI---LNDIIVTRGFYDL 206

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEI---LYNEDDIKSRG 289
           +         ++     K  ID+ ++  +         I  SF         ++   ++ 
Sbjct: 207 YSFLAPKDRYSHAVHGKKRAIDHVLLSPSFMANGDLSYIDGSFEVFKPSFVVDEHGFAKS 266

Query: 290 KRLSDHCPISIDYD 303
              SDH  +     
Sbjct: 267 DLYSDHFALKFKIS 280


>gi|229131979|ref|ZP_04260843.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
 gi|228651483|gb|EEL07454.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
          Length = 788

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 85/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ +QEM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVQEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 AINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVISNHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   Q+K +  P V+ GD N               +   
Sbjct: 661 QPLVLKSEEKRVQLAQEVNHFVQGIQEKNTNAPVVVLGDMNDFEFSKPLEALEGTILKD- 719

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 720 ----MLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+ +  D
Sbjct: 772 VSDHDPVLVQID 783


>gi|229166011|ref|ZP_04293775.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
 gi|228617422|gb|EEK74483.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
          Length = 788

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 85/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ +QEM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVQEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 AINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVISNHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   Q+K +  P V+ GD N               +   
Sbjct: 661 QPLVLKSEEKRVQLAQEVNHFVQGIQEKNTNAPVVVLGDMNDFEFSKPLEALEGTILKD- 719

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 720 ----MLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+ +  D
Sbjct: 772 VSDHDPVLVQID 783


>gi|163938988|ref|YP_001643872.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
           KBAB4]
 gi|163861185|gb|ABY42244.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
           KBAB4]
          Length = 788

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 85/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ +QEM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVQEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 AINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVISNHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   Q+K +  P V+ GD N               +   
Sbjct: 661 QPLVLKSEEKRVQLAQEVNHFVQGIQEKNTNAPVVVLGDMNDFEFSKPLEALEGTILKD- 719

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 720 ----MLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+ +  D
Sbjct: 772 VSDHDPVLVQID 783


>gi|71903215|ref|YP_280018.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS6180]
 gi|71802310|gb|AAX71663.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS6180]
          Length = 910

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVNRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|209559126|ref|YP_002285598.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes NZ131]
 gi|209540327|gb|ACI60903.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes NZ131]
          Length = 910

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGTKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|83649180|ref|YP_437615.1| extracellular nuclease [Hahella chejuensis KCTC 2396]
 gi|83637223|gb|ABC33190.1| predicted extracellular nuclease [Hahella chejuensis KCTC 2396]
          Length = 835

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/325 (12%), Positives = 86/325 (26%), Gaps = 43/325 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADI 68
               + A  +++ S+N+      +G      + +                     +DAD+
Sbjct: 457 APVTTGAGNLKVASFNVLNYFNGDGQGGGFPTSRGATTAEELERQAAKTVAALLAMDADV 516

Query: 69  VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           V L E+ +      +A+  +  +               S     ++I   +  +   V  
Sbjct: 517 VGLMEIENDGYGADSAIQDLVNRLNAAGANYAVVNPGLS-ALGGDEIAVGMIYKADKVTP 575

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-- 181
              +  L              A    +  N  KI V+  H KS    ++  +        
Sbjct: 576 AGAAKSLSSYPFDNFNRQP-LAQTFSLNDNDGKITVVVNHFKSKGCTNAEGDNQDQGDGQ 634

Query: 182 ----SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               +  S+ A  L DW+            +I GD N               +       
Sbjct: 635 GCYNAKRSEAAVALADWLASDPTGAEDADVLIIGDLNAYAKEDPI-----MALQTQGYHN 689

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
              +       +         +D+ +  ++    ++  S   I  +E             
Sbjct: 690 LLAELNGDAAYSYVFSGETGYLDHALASESLRSQVVGVSEWHINGDEPRALDYNVEFKTD 749

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ ++  
Sbjct: 750 AQVLSLYSPDAFRSSDHDPVIVEIS 774


>gi|56807877|ref|ZP_00365710.1| COG2374: Predicted extracellular nuclease [Streptococcus pyogenes
           M49 591]
          Length = 846

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 484 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 535

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 536 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 594

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 595 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 654

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 655 SKRGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGTKHQANIVMLGDFNDFEFTKTI- 713

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 714 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 765

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 766 NSPFMEAHGRASDHDPLLLQLSF 788


>gi|294667784|ref|ZP_06732994.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602410|gb|EFF45851.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 572

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 90/324 (27%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+N+       G      +       ++  +    L   
Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315

Query: 61  AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +       AV+++             + ++      ++ I   I 
Sbjct: 316 IVPLGADVAALMEVENDGNAADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIL 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +        G    V+  H KS  C   S 
Sbjct: 376 YRSSQVTPVGKPAMLTGGPFENH---SRVPLAQAFRSARGATFVVVANHFKSKGCGNASG 432

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L  W+            V+ GDFN     +        
Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMEMPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L   +   I  +  D  
Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHINADVMDAA 547

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571


>gi|319899949|ref|YP_004159677.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319414980|gb|ADV42091.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 287

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 87/316 (27%), Gaps = 42/316 (13%)

Query: 1   MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M R  +L L  +   C       S    V ++S+NI   + ++ ++ W+    R      
Sbjct: 1   MKRIILLLLPLWAASCGQSKKPVSAPDPVNVMSFNIRYDNPEDSLNNWRYRKDR------ 54

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            +    +  D D++  QE+              + +              S         
Sbjct: 55  -VATAIRFYDTDLLGTQEVLHNQLKDLQECLPEYGVVGVGREDGKEKGEYSALWYKKDRF 113

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173
           V   +        P +     +  A  R A    +  +++GK+ + L+ HL         
Sbjct: 114 VLLDSGNFWLSETPGVAGSKGWDGACERIASWAKLKDKVSGKEYFALNTHL-----DHVG 168

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTID 229
               S    L+  +   L         + +P ++ GDFN                 + + 
Sbjct: 169 VVARSEGIRLILDRVDEL--------SNGLPVIVTGDFNADPESDVIKHVTDPANPRHLT 220

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                           +    +       IDY  +               + Y       
Sbjct: 221 DARMESPVVYGPAWTFHDFGKIPYDQRPLIDYVFVRNGL---------KVLRYGVLAETE 271

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P+ +  +
Sbjct: 272 GNAFLSDHSPVLVTVE 287


>gi|253571354|ref|ZP_04848761.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251839307|gb|EES67391.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 315

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 83/324 (25%), Gaps = 35/324 (10%)

Query: 1   MIRKYVLALVF---FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M  + +L +V        C +     + + S+N+   +  +               Y ++
Sbjct: 1   MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDG-----WGQRYPVI 55

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            Q  +  D DI   QE   +           +                S     T     
Sbjct: 56  AQIVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDI 115

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +         P + +K  +     R       +        L  +L         +   
Sbjct: 116 VEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTSFEFLFFNLHM---DHIGKKAR 171

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIR 236
             S  L+ ++ + L           +P ++ GDFN    +   +    K  +  +     
Sbjct: 172 VESAFLVQEKMKELGR------GKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCD 225

Query: 237 FPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFL---------------IQESFSEILY 280
           +    +   N           ID+  +  + +                   +E   +   
Sbjct: 226 YRYALNGTFNNFDPNSFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEEVRDCPE 285

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
                    +  SDH P+ ++  F
Sbjct: 286 EITIKAYEARTPSDHFPVKVELVF 309


>gi|218509998|ref|ZP_03507876.1| putative metal-dependent hydrolase protein [Rhizobium etli Brasil
           5]
          Length = 242

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 83/285 (29%), Gaps = 49/285 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++L+++N+++    +              D   +        ADIV LQE+       
Sbjct: 4   KSIKLLTYNVHSCIGNDR-----------KLDPGRIASVIAEAGADIVALQEVDVLRRRT 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +          +   H       + +   A+         ++ PL           
Sbjct: 53  GGIDQAHLIASLLKMQAHFHPALSIAEEQY-GDAIITALPTSAVKAGPLPSIG------E 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199
            R A+ + V +  +K+ V++ HL                     +Q   L +  W+    
Sbjct: 106 QRGALSVEVLVGDRKLLVVNTHLGLRG-------------RERIRQMTTLLNSGWLRGAM 152

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           E  +P V+ GDFN   +         +++            K +      +    + +D+
Sbjct: 153 EEPLPCVLCGDFNALPSSAT-YRLVARSLKDAQL-----GGKAAPRATFPSRYPLMRLDH 206

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +                        K  SDH P+  +  F
Sbjct: 207 IFVTDDLVVKRAAV----------LQNRLTKVASDHLPLFAEISF 241


>gi|16124778|ref|NP_419342.1| hypothetical protein CC_0523 [Caulobacter crescentus CB15]
 gi|221233494|ref|YP_002515930.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter
           crescentus NA1000]
 gi|13421706|gb|AAK22510.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220962666|gb|ACL94022.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter
           crescentus NA1000]
          Length = 259

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 88/284 (30%), Gaps = 42/284 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +  RL+++N++     +              D   + +       D+V LQE+    A  
Sbjct: 2   KTFRLMTYNVHRCVGTDR-----------KLDVERVAEVIAAERPDVVALQELDVGRART 50

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +              H       +++   A+         ++   L          
Sbjct: 51  QSVDQAHRLAELLKMSFHFHPAMAVEEELY-GDAILTALPERRIKA-QGLPLYRRVPGLE 108

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199
            R A+ + VE+ G K+ +++ HL                     +QA  L   +WI + +
Sbjct: 109 PRGALWIEVEVGGAKVQIINTHLGLVP-------------QEQKRQAAALLGPEWIGE-E 154

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P V+ GDFN                D       + +   +   ++      + ID+
Sbjct: 155 AWRAPGVLLGDFNATPYSATYRMLRTALRDAQAPSPAWLRPATATFPSSFPF---MRIDH 211

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +      +   +           +R +  SDH P+ ID +
Sbjct: 212 VFVTKGLETRAVSSPYD----------ARARIASDHLPLVIDLE 245


>gi|171910435|ref|ZP_02925905.1| hypothetical protein VspiD_04665 [Verrucomicrobium spinosum DSM
           4136]
          Length = 280

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 81/297 (27%), Gaps = 34/297 (11%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           ++    P     ++ VRLV+WN+              +  +    +  +        AD+
Sbjct: 1   MILISAPLNGHASEVVRLVTWNLEWFP----GRKPTATQGKKDRHFLEVAAVIPQFRADV 56

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + LQE+   ++  K+         +   R  +             IA+  +         
Sbjct: 57  MVLQEVRDQDSAEKLAKLMPGFQVHVVSRFKDEVGGAVGLQQ---IAIMSRFP----ADG 109

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               +         R  V   + + G+ + V  +HLKS         +            
Sbjct: 110 AWAESWKRGWANAPRGYVYAKLIVEGRPLHVYGLHLKSNLGDPIKNTSKREDA------V 163

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGN-NDDFWKTIDPNDSLIRFPKEKDSR--C 245
           + L   I  + ++  P V+ GDFN     L    D     ++       F          
Sbjct: 164 EQLLGHIKDQCKAGEPVVVTGDFNTSKEQLNLAGDRTLLKLEEQGFFWAFEGVPLKDRIT 223

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       D+           +     +               SDH P+++D 
Sbjct: 224 IPGGGRYPDACFDHVYTRD--LGRPVAAVLKDTP------------GSDHFPVAVDL 266


>gi|294627485|ref|ZP_06706068.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598116|gb|EFF42270.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 572

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 91/324 (28%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+N+       G      +       ++  +  T L   
Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLTKLVAT 315

Query: 61  AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +       AV+++             + ++      ++ I   I 
Sbjct: 316 IVPLGADVAALMEVENDGNAADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIL 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +        G    V+  H KS  C   S 
Sbjct: 376 YRSSQVTPVGKPAMLTGGPFENH---SRVPLAQAFRSARGATFVVVANHFKSKGCGNASG 432

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L  W+            V+ GDFN     +        
Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMEMPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L   +   I  +  D  
Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHINADVMDAA 547

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571


>gi|163757064|ref|ZP_02164169.1| hypothetical protein KAOT1_04125 [Kordia algicida OT-1]
 gi|161322964|gb|EDP94308.1| hypothetical protein KAOT1_04125 [Kordia algicida OT-1]
          Length = 277

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 89/306 (29%), Gaps = 40/306 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           + KY+L L+   +  + + +Q+++++S+NI        +   K       +    +    
Sbjct: 1   MMKYLLTLLVVFISFSVT-SQELKIMSYNI-------KLDYPKEGKNSWMNRKPFMVNQI 52

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           K  +  ++ +QE               +           +    S      AI  +K  +
Sbjct: 53  KFYEPTVLGVQEALPNQMKDLDSLLTDYSFVGVGRDDGKNKGEYS------AIFYKKDEL 106

Query: 122 RVLQQSYPLLGAKDS-----FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            V+Q S   L          +    NR     L +    K      +             
Sbjct: 107 EVVQSSTFWLSETPEKVSMGWDAVCNRMCTYALFQHTKTKQKFWVFNTHFDHVGKE---- 162

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                      A  + + I        P  + GDFN + N+    D   +++  +  +  
Sbjct: 163 ------ARKNSAVLILNKIKSANTENYPVFLTGDFNMEPNHESI-DHITQSLKDSKKIAA 215

Query: 237 FPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                +   N     +     IDY  + ++              Y         +  SDH
Sbjct: 216 LDFGPEGTFNGFHFDKPVTRRIDYIFVSKH---------VKVHKYAVLSDHWNMQYPSDH 266

Query: 296 CPISID 301
            P+ I+
Sbjct: 267 LPVLIE 272


>gi|255532876|ref|YP_003093248.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255345860|gb|ACU05186.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 282

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 100/312 (32%), Gaps = 51/312 (16%)

Query: 2   IRKYVLALVFFLVPCT---------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
           I+ + +A +     C+          +  + +R++S+NI+             S      
Sbjct: 13  IKAFAVAALLIGTSCSKSKENKTEPETSKETLRVMSYNIH--------IGNPPSEAAGVV 64

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
                    K  + D+V LQE+  +   + +       +   T      +K    ++   
Sbjct: 65  KLEATANAIKQGNPDLVALQEVDKFTTRSGIDLDQAKKLAELTGMNYYFAKALDRSNGEY 124

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +A+  K        Y L     + +       +++ +  NGK+I+ +  H         
Sbjct: 125 GVAILSKFPIKTSSRYSLPVNAGTGAELRVVGIIQVEL-PNGKRIYFVSTHFDHL----- 178

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                  + S     A+ L   I   K+S  P ++ GDFN            W  I    
Sbjct: 179 -------AESNRELHARELLKAIQPYKDS--PVIVGGDFNMPPTSD-----TWNIIKTEM 224

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           ++               N      IDY ++++ A  +   +S+  I           +  
Sbjct: 225 TMGCTT---CPSTFPATNPNT--TIDYLLLNKQASGYFSIKSYQTI---------AERYA 270

Query: 293 SDHCPISIDYDF 304
           SDH PI  +  +
Sbjct: 271 SDHVPIIAELQY 282


>gi|228899360|ref|ZP_04063622.1| Sphingomyelinase C [Bacillus thuringiensis IBL 4222]
 gi|228860266|gb|EEN04664.1| Sphingomyelinase C [Bacillus thuringiensis IBL 4222]
          Length = 333

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKKLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + I V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYTSMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|240141150|ref|YP_002965630.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium
           extorquens AM1]
 gi|240011127|gb|ACS42353.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium
           extorquens AM1]
          Length = 275

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 83/289 (28%), Gaps = 41/289 (14%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             ++ ++++RL+++N+      +G                 + +    L  DIV LQE+ 
Sbjct: 21  PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALAPDIVALQEVD 69

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                     +              H       +     AV       L+++ PL G   
Sbjct: 70  VGRPRTDGLDQAEEIARLVGMFSHFHPALHI-EEERYGDAVLTHLPSRLKRAGPLPGLLR 128

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--D 193
                  R A+ + V     K+ VL  H                  +    QA+ L   D
Sbjct: 129 RPG-LEPRGALWVEVTAGASKLQVLTTHFGLLG-------------AERVAQAKALLGPD 174

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           W+        P V+ GDFN             + +     L    + +        +   
Sbjct: 175 WL-GDPACHAPTVLLGDFNAMGWSRAYRRLSGR-LTDARRLTGERRWRRGGA-TFPSRFP 231

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +D+  + +      I                  ++ SDH P+  + 
Sbjct: 232 LLRVDHVFVSERVAVERIAV----------VDTPLARKASDHLPVLAEI 270


>gi|228919526|ref|ZP_04082890.1| Sphingomyelinase C [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228840169|gb|EEM85446.1| Sphingomyelinase C [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 333

 Score =  115 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 100/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + I V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +        +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPKNEYVLIGGDMNVNKINTENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATLS 331


>gi|254563662|ref|YP_003070757.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           DM4]
 gi|254270940|emb|CAX26945.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium
           extorquens DM4]
          Length = 275

 Score =  115 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 84/289 (29%), Gaps = 41/289 (14%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             ++ ++++RL+++N+      +G                 + +    L  DIV LQE+ 
Sbjct: 21  PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALAPDIVALQEVD 69

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                     +              H       +     AV       L+++ PL G   
Sbjct: 70  VGRPRTDGLDQAEEIARLVGMFSHFHPALHI-EEERYGDAVLTHLPSRLKRAGPLPGLLR 128

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--D 193
                  R A+ + V     K+ VL  H                  +    QA+ L   D
Sbjct: 129 RPG-LEPRGALWVEVAAGASKLQVLTTHFGLLG-------------AERVAQAKALLGPD 174

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           W+        P V+ GDFN        +    + +     L    + +        +   
Sbjct: 175 WL-GDPACHAPTVLLGDFNATGWSRAYHRLSGR-LTDARRLTGERRWRRGGA-TFPSRFP 231

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +D+  + +      I                  ++ SDH P+  + 
Sbjct: 232 LLRVDHVFVSERVAVERIAV----------VDTPLARKASDHLPVLAEI 270


>gi|190894773|ref|YP_001985066.1| putative metal-dependent hydrolase [Rhizobium etli CIAT 652]
 gi|190700434|gb|ACE94516.1| putative metal-dependent hydrolase protein [Rhizobium etli CIAT
           652]
          Length = 242

 Score =  115 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 82/285 (28%), Gaps = 49/285 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++L+++N+++    +              D   +        ADIV LQE+       
Sbjct: 4   KSIKLLTYNVHSCIGNDR-----------KLDPGRIASVIAEAGADIVALQEVDVLRRRT 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +          +   H       + +   A+         ++ PL           
Sbjct: 53  GGIDQAHLIASLLKMQAHFHPALSVAEEQY-GDAIITALPTSAVKAGPLPSIG------E 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199
            R A+ + V +  +K+ V++ HL                     +Q   L +  W+    
Sbjct: 106 QRGALSVEVLVGDRKLLVVNTHLGLRG-------------RERIRQMTTLLNSGWLRGAM 152

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           E  +P V+ GDFN   +         +++            K S      +    + +D+
Sbjct: 153 EEPLPCVLCGDFNALPSSAT-YRLVARSLKDAQL-----GGKASPRATFPSRYPLMRLDH 206

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +                           SDH P+  +  F
Sbjct: 207 IFVTDDLVVKRAAV----------LQNRLTNVASDHLPLFAEISF 241


>gi|169827405|ref|YP_001697563.1| endonuclease yhcR [Lysinibacillus sphaericus C3-41]
 gi|168991893|gb|ACA39433.1| Endonuclease yhcR precursor [Lysinibacillus sphaericus C3-41]
          Length = 1379

 Score =  115 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 90/328 (27%), Gaps = 60/328 (18%)

Query: 18   ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG 75
              VA K+ + S+NI   S     +               +     N     DI+ L E+ 
Sbjct: 948  QPVADKLNVASYNIENFSNNPANTSN--------EKVDRIAATFVNNMKSPDIITLVEVQ 999

Query: 76   SYNA------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
              +                     K      +        + N        +I       
Sbjct: 1000 DNDGQIDSGNADASESYMRLIHAIKAAGGPAYDW-IDVMPINNTVGGAPGGNIRVGYLYN 1058

Query: 118  KKNVRVLQQSYPL----------------LGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
               V ++     L                 G  D       R+ +    E   +++ ++ 
Sbjct: 1059 PTRVSLVSGIKGLGNQANTWTADGSLALNPGFVDPSKFVDTRKPIAAEFEFQDERVVIIG 1118

Query: 162  IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
             HL S     SL          S     Q AQ + D+I +       + F++AGD N   
Sbjct: 1119 AHLNSKGGDGSLWGPTQPPVLESVKKRIQLAQAINDFIDEGLAINPNLNFIVAGDMNDF- 1177

Query: 216  NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                      +T+  +       K  +          N   +D+ ++  +        + 
Sbjct: 1178 ----EFTPALETLKGDVLTNMIDKAPEQDRFTYFFQGNNQVLDHILVSNHLAD----VTE 1229

Query: 276  SEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ++++   +      R SDH P+ +  D
Sbjct: 1230 IDLIHMNANFTEAQGRASDHDPVLVQID 1257


>gi|21241048|ref|NP_640630.1| nuclease [Xanthomonas axonopodis pv. citri str. 306]
 gi|21106341|gb|AAM35166.1| nuclease [Xanthomonas axonopodis pv. citri str. 306]
          Length = 609

 Score =  115 bits (287), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 89/324 (27%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+N+       G      +       ++  +    L   
Sbjct: 293 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 352

Query: 61  AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +       AV+++             + ++      ++ I   I 
Sbjct: 353 IVPLGADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGII 412

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +        G    V+  H KS  C   S 
Sbjct: 413 YRSSQVTPVGRPATLTGGPFENH---SRVPLAQAFRSARGATFVVVANHFKSKGCGNASG 469

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L  W+            V+ GDFN              
Sbjct: 470 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMETPMRS---- 525

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L   +   +  +  D  
Sbjct: 526 -LRASGWQDAFAVAGVKQPYSYVYDGLSGRLDHALLSPAMAKQLRGAAEWHVNADVMDAA 584

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 585 GYAKRNLPGPWRSSDHDPVLLGFS 608


>gi|298386889|ref|ZP_06996444.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
 gi|298260563|gb|EFI03432.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
          Length = 315

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 83/324 (25%), Gaps = 35/324 (10%)

Query: 1   MIRKYVLALVF---FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M  + +L +V        C +     + + S+N+   +  +               Y ++
Sbjct: 1   MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDG-----WGQRYPVI 55

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            Q  +  D DI   QE   +           +                S     T     
Sbjct: 56  AQIVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDI 115

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +         P + +K  +     R       +        L  +L         +   
Sbjct: 116 VEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKAR 171

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIR 236
             S  L+ ++ + L           +P ++ GDFN    +   +    K  +  +     
Sbjct: 172 VESAFLVQEKMKELGR------GKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCD 225

Query: 237 FPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFL---------------IQESFSEILY 280
           +    +   N           ID+  +  + +                   +E   +   
Sbjct: 226 YRYALNGTFNNFDPNSFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPE 285

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
                    +  SDH P+ ++  F
Sbjct: 286 EITIKAYEARTPSDHFPVKVELVF 309


>gi|229108284|ref|ZP_04237904.1| Sphingomyelinase C [Bacillus cereus Rock1-15]
 gi|228675169|gb|EEL30393.1| Sphingomyelinase C [Bacillus cereus Rock1-15]
          Length = 333

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 106/314 (33%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDS-LIRFPK 239
           Q + ++D+I  +   +    +I GD N        N        +KT++ +      +  
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGYTA 257

Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
             D+  N+             +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|195977910|ref|YP_002123154.1| extracellular nuclease [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974615|gb|ACG62141.1| extracellular nuclease [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 926

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 556 KLSIASYNIENFSANPSSTKD--------EKVRRIAESFIYDLNAPDIIGLIEVQDNNGP 607

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N       ++I T    + + V 
Sbjct: 608 TDDGTTDATQSAQRLIDAIKALGGPTYQ-YVDIAPENNADGGQPGSNIRTGFLYQPERVS 666

Query: 123 VLQQSYPLLGAKDSF-----------------SRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +    +     +                 +    R+++       G K+ V+  HL 
Sbjct: 667 LSDKPRGGVNDAVKWVNGELSLSVGRIDPTNPAWKSVRKSLAAEFIFQGHKVVVVANHLN 726

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    +SL          S       A+ L  +  +        V+ GDFN         
Sbjct: 727 SKRGDNSLYGRVQPVTFKSEERRHVLARLLSQFTKEGASQQANIVMLGDFNDYEFTKTI- 785

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               K I+  D      + + S   +     N   +D  ++ +N       +        
Sbjct: 786 ----KLIEEGDMANLVSRHELSDRYSYFYRGNNQTLDNMLVSRNLLGRYEFDMVHV---- 837

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 838 NSPFMEAHGRASDHDPLLLQLSF 860


>gi|218895728|ref|YP_002444139.1| sphingomyelin phosphodiesterase C [Bacillus cereus G9842]
 gi|218542554|gb|ACK94948.1| sphingomyelin phosphodiesterase C [Bacillus cereus G9842]
          Length = 333

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + I V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYTSMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|30018853|ref|NP_830484.1| sphingomyelin phosphodiesterase [Bacillus cereus ATCC 14579]
 gi|229042535|ref|ZP_04190279.1| Sphingomyelinase C [Bacillus cereus AH676]
 gi|229126103|ref|ZP_04255125.1| Sphingomyelinase C [Bacillus cereus BDRD-Cer4]
 gi|229143400|ref|ZP_04271830.1| Sphingomyelinase C [Bacillus cereus BDRD-ST24]
 gi|29894395|gb|AAP07685.1| Sphingomyelin phosphodiesterase [Bacillus cereus ATCC 14579]
 gi|228640067|gb|EEK96467.1| Sphingomyelinase C [Bacillus cereus BDRD-ST24]
 gi|228657425|gb|EEL13241.1| Sphingomyelinase C [Bacillus cereus BDRD-Cer4]
 gi|228726807|gb|EEL78020.1| Sphingomyelinase C [Bacillus cereus AH676]
          Length = 333

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N        N        +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|190892922|ref|YP_001979464.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652]
 gi|190698201|gb|ACE92286.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652]
          Length = 357

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 74/333 (22%), Positives = 128/333 (38%), Gaps = 57/333 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L SWNI  L+ + GV L  ++  R  ++Y  +R     L+ D+V LQEMGS  +   V 
Sbjct: 26  KLASWNIGNLASKPGVPLRGHA--RDEAEYQHIRDIFAKLEPDVVALQEMGSIGSARAVV 83

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA---- 140
             +   +F       +    +  +DI TAIA +K   ++ +   P L    +   A    
Sbjct: 84  GDSYNIVFEERCMNNSSHCNEDIDDIFTAIAYKKSLGQLTEVQVPQLSVMHTSECANETP 143

Query: 141 -GNRRAVELLVEINGKKIWVLDIHLKSFC--FLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              R  V + ++ + + I VL +HLK+ C    +  E   +  C+ L +QA  L +WI  
Sbjct: 144 RPVRGGVGIQIQRDNETIVVLSVHLKASCKRNDNEAERDQADDCATLMKQADILSEWIKT 203

Query: 198 KKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-------- 248
           ++ +    ++AGDFNR+ ++   +     + +D         +E  +             
Sbjct: 204 ERAAGKRVIVAGDFNRQLLDRGDHVAAKLRAVDAGVQFYPTSRECWASFPNRGAAIIAAA 263

Query: 249 ----------------KNLRNKIPIDYFVMDQNAYKFLIQES-------FSEILYNEDDI 285
                            + ++   IDYFV+   A +  I                  D +
Sbjct: 264 NQKFPEIAAAGGRPLPYSPKSNSKIDYFVVSGPAPQTPISSGQYAMGGEAKTTELATDYL 323

Query: 286 KS----------------RGKRLSDHCPISIDY 302
           K+                     SDHCPIS+  
Sbjct: 324 KTCEGSPNKFEDGSVLTFSEVEPSDHCPISMSL 356


>gi|241113465|ref|YP_002973300.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240861673|gb|ACS59339.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 242

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 83/285 (29%), Gaps = 49/285 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++++++N+++    +              D   +       +ADIV LQE+       
Sbjct: 4   QSIKILTYNVHSCIGGDR-----------KLDPGRIASVIAEAEADIVALQEVDVLRRRT 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +          +   H       + +   A+         ++ PL           
Sbjct: 53  GGVDQAHAIASLLKMQAHFHPALSIAEEQY-GDAIITSLPTGAVKAGPLPSIG------E 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199
            R A+ + + +  +K+ V++ HL                     +Q   L +  W+    
Sbjct: 106 QRGAISVEILVGNRKLLVVNTHLGLRG-------------RERIRQMTTLLNPGWLRGTT 152

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +  +P ++ GDFN   +         +++              +      +    + +D+
Sbjct: 153 DEPLPTILCGDFNAIPSSAT-YRLAARSLKDAQLA-----GSAAPRATFPSRYPLMRLDH 206

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +                        +  SDH P+  +  F
Sbjct: 207 IFVTDDLIVKQAAV----------LENRLTRIASDHLPLLAEIGF 241


>gi|295687845|ref|YP_003591538.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
 gi|295429748|gb|ADG08920.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
          Length = 259

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 90/284 (31%), Gaps = 42/284 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +RL+++N++     +              D   + +       D+V LQE+    A  
Sbjct: 2   KTLRLMTYNVHRCVGADR-----------KLDVERVAEVIAAERPDVVALQELDVRRART 50

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +              H       +++   A+         ++   L          
Sbjct: 51  RGVDQAHRLAELLKMSFHFHPAMAVEEELY-GDAILTALPERRIKA-KGLPLYRRVPGLE 108

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199
            R A+ + VE+ G K+ +++ HL                     +QA  L   DW+    
Sbjct: 109 PRGALWIEVEVGGTKVQIINTHLGLVP-------------QEQKRQAAALLGPDWMGDD- 154

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
             + P V+ GDFN                D       +P+   +   ++      + ID+
Sbjct: 155 RWVAPGVVLGDFNATPYSATYRMLRTALRDAQAPSPAWPRPATATFPSSFPF---MRIDH 211

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +      ++  +           +R +  SDH P+ +D +
Sbjct: 212 VFLTKGLETRGVRSPYD----------ARARIASDHLPLVVDLE 245


>gi|218235530|ref|YP_002365468.1| sphingomyelin phosphodiesterase C [Bacillus cereus B4264]
 gi|218163487|gb|ACK63479.1| sphingomyelin phosphodiesterase C [Bacillus cereus B4264]
          Length = 333

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|188989673|ref|YP_001901683.1| putative extracellular nuclease [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167731433|emb|CAP49608.1| putative extracellular nuclease [Xanthomonas campestris pv.
           campestris]
          Length = 572

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 93/323 (28%), Gaps = 35/323 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L     P    V   +R+ S+N+       G      +       ++  +    L   
Sbjct: 256 LTLPALPAPVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315

Query: 61  AKNLDADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +       AVA++             R ++      ++ I   I 
Sbjct: 316 IVPLQADVAALMELENDGNDGDTAVAQLVAALNAAGKDKDWRFVDSGSGPGDDAIRVGIV 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            R   V  + +   L G         +R  +      + G    V+  H KS    ++  
Sbjct: 376 YRSTQVTPVGKPATLTGGPFDSH---SRVPLAQAFRSSRGATFVVVANHFKSKGCGNASG 432

Query: 175 NTYSP------SCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
                        +  ++ A+ L  W+            V+ GDFN              
Sbjct: 433 ADADQHDGQACWNATRTESAKRLHQWLQSDPTGAQTKLAVLLGDFNAYAMETPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L   +   I  +  D  
Sbjct: 489 -LRASGWQDAFAVVGVKQPYSYVYDGMSGRLDHALLSPAMAKQLRGAAEWHINADAMDDA 547

Query: 287 SRG-------KRLSDHCPISIDY 302
                      R SDH P+ + +
Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGF 570


>gi|21229733|ref|NP_635650.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66766610|ref|YP_241372.1| nuclease [Xanthomonas campestris pv. campestris str. 8004]
 gi|21111221|gb|AAM39574.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66571942|gb|AAY47352.1| nuclease [Xanthomonas campestris pv. campestris str. 8004]
          Length = 606

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 93/323 (28%), Gaps = 35/323 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L     P    V   +R+ S+N+       G      +       ++  +    L   
Sbjct: 290 LTLPALPAPVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 349

Query: 61  AKNLDADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +       AVA++             R ++      ++ I   I 
Sbjct: 350 IVPLQADVAALMELENDGNDGDTAVAQLVAALNAAGKDKDWRFVDSGSGPGDDAIRVGIV 409

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            R   V  + +   L G         +R  +      + G    V+  H KS    ++  
Sbjct: 410 YRSTQVTPVGKPATLTGGPFDSH---SRVPLAQAFRSSRGATFVVVANHFKSKGCGNASG 466

Query: 175 NTYSP------SCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
                        +  ++ A+ L  W+            V+ GDFN              
Sbjct: 467 ADADQHDGQACWNATRTESAKRLHQWLQSDPTGAQTKLAVLLGDFNAYAMETPMRS---- 522

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L   +   I  +  D  
Sbjct: 523 -LRASGWQDAFAVVGVKQPYSYVYDGMSGRLDHALLSPAMAKQLRGAAEWHINADAMDDA 581

Query: 287 SRG-------KRLSDHCPISIDY 302
                      R SDH P+ + +
Sbjct: 582 GYAKRNLPGPWRSSDHDPVLLGF 604


>gi|228963775|ref|ZP_04124916.1| Sphingomyelinase C [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228795920|gb|EEM43387.1| Sphingomyelinase C [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 333

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINTENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPPYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|325856403|ref|ZP_08172119.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
 gi|325483587|gb|EGC86559.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
          Length = 291

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 80/307 (26%), Gaps = 28/307 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           I   +  L+  ++   +  AQ++ + ++NI   +  +                  L  + 
Sbjct: 8   IMYRLTTLILAMLLTCSLSAQQLYVGTYNIRYDNPNDRKEGNA-----WAQRCPQLCDFI 62

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                 +   QE+ +      +     +                +       +     + 
Sbjct: 63  NFEQPAVFGTQEVLATQLRDLLQGLEGYAYIGVGRDDGREEGEYAAIFYRKDLLKLLDSG 122

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSP 179
                  P   +   +  A  R       E    GK+ +  + H+               
Sbjct: 123 NFWLSQTPERPSL-GWDAACIRICTWGKFEDKTTGKQFYFFNTHM-----DHVGTVARRE 176

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           S  L+ Q+   L            P ++ GDFN               I  +       +
Sbjct: 177 STRLILQRIGQLAK--------SQPTILTGDFNVDQTDEIYGIFSRSGILRDCYAHARQR 228

Query: 240 EKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              +    +    ++    ID+  +  +            I  N   +    + +SDH P
Sbjct: 229 MAPTGTWNDFMQDSRSNARIDHVFVSSDFDIQHYA-----IFTNSYWLGKSRRNISDHYP 283

Query: 298 ISIDYDF 304
           + +   F
Sbjct: 284 VMVKLSF 290


>gi|296501428|ref|YP_003663128.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis BMB171]
 gi|296322480|gb|ADH05408.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis BMB171]
          Length = 333

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N        N        +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|284039609|ref|YP_003389539.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
 gi|283818902|gb|ADB40740.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
          Length = 299

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 85/303 (28%), Gaps = 32/303 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +R  +  L+  L+    + AQ    + + ++N+   ++ +G++ W N           ++
Sbjct: 20  MRILIFVLLSSLMLTQTTFAQKDTPINVATYNLRYNNKGDGINAWPNRK-------ENVK 72

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              +  + D+   QE    + +  V   N +    +       +   S            
Sbjct: 73  ALIRFHEFDLFGTQEAL-RDQLNDVAELNEFAFLGAGRDDGKEAGEHSAVFYRKDRFKPL 131

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           ++        P    K   +   NR            K       +    F         
Sbjct: 132 QSGNFWLSETPDKPGKGWDATCCNRICSWAKFNDLKTKKDFYFFSVH---FDHQGVEARR 188

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S  L+ ++ + +            P ++ GD N   +            D +D     P
Sbjct: 189 QSGKLMVEKIKEIAK--------NTPVILVGDLNSTPDTEQVRTIKTLLNDAHDVTKMPP 240

Query: 239 KEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              +   N+ K        IDY    +          F  + Y         +  SDH P
Sbjct: 241 YGPEGTFNSFKFDAPMDNRIDYIFTSKQ---------FDVLKYGVLTDAKEQRYPSDHQP 291

Query: 298 ISI 300
           +  
Sbjct: 292 VVA 294


>gi|322421580|ref|YP_004200803.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
 gi|320127967|gb|ADW15527.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
          Length = 258

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 89/282 (31%), Gaps = 44/282 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              ++++N++ L+  +  +               + Q       DI+ LQE+    +  +
Sbjct: 7   TFTVMTYNVHRLTGNDRHTS-----------AARVAQVIDTYRPDIIALQELPGARSRPE 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   + +    L                 V  ++   L ++   L  ++ +     
Sbjct: 56  -VGGACQDLAHELALLAPRENHYQMERERWGNVVFSRHPMRLVRAG-GLHPENRYRTMVP 113

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKE 200
           R  + + ++I G+K+ +++ HL                    + QA+ L   +W+    E
Sbjct: 114 RGVLWVEIDICGQKLQLVNTHLGLTP-------------RERNYQAKVLAGPEWLA-HPE 159

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++ GDFN   ++  +       +D  +SL               +    +  D+ 
Sbjct: 160 CRPPVLLCGDFNALPSWSIHKRLKNALMDEQESLKF-----GHTKFTFPSNLPIVRFDHI 214

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +  +          +++              SDH P+ +  
Sbjct: 215 FISPDLAVESELIPRTKLTTV----------ASDHLPLIVKL 246


>gi|225870288|ref|YP_002746235.1| endonuclease/exonuclease/phosphatase family surface anchored
           protein [Streptococcus equi subsp. equi 4047]
 gi|225699692|emb|CAW93409.1| endonuclease/exonuclease/phosphatase family surface anchored
           protein [Streptococcus equi subsp. equi 4047]
          Length = 926

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 87/323 (26%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 556 KLSIASYNIENFSANPSSTKD--------EKVRRIAESFIYDLNAPDIIGLIEVQDNNGP 607

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K      +  +       N       ++I T    +   V 
Sbjct: 608 TDDGTTDATQSAQRLIDAIKALGGPAYQ-YVDIAPENNADGGQPGSNIRTGFLYQPGRVS 666

Query: 123 VLQQSYPLLGAKDSFSRAGN-----------------RRAVELLVEINGKKIWVLDIHLK 165
           +  +    +     +                      R+++       G K+ V+  HL 
Sbjct: 667 LSDKPRGGVNDAVKWVNGELSLSVGRIDPTNPAWNSVRKSLAAEFIFQGHKVVVVANHLN 726

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    +SL          S       A+ L  +  +        V+ GDFN         
Sbjct: 727 SKRGDNSLYGRVQPVTFKSEERRHVLARLLSQFTKEGASQQANIVMLGDFNDYEFTKTI- 785

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               K I+  D      + + S   +     N   +D  ++ +N       +        
Sbjct: 786 ----KLIEEGDMANLVSRHELSDRYSYFYRGNNQTLDNMLVSRNLLGRYEFDMVHV---- 837

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 838 NSPFMEAHGRASDHDPLLLQLSF 860


>gi|75759565|ref|ZP_00739653.1| Sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74492943|gb|EAO56071.1| Sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 329

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 25  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 78

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 79  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKKLGNYSSSTPEDGGVAIVSKWPIAEKI 138

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + I V+  HL++    DS+    SP+ S+ + 
Sbjct: 139 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTN 193

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 194 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYTSMFKTLNASVPSYTGHTA 253

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 254 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 313

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 314 NDYSDHYPVEATIS 327


>gi|15674798|ref|NP_268972.1| hypothetical protein SPy_0747 [Streptococcus pyogenes M1 GAS]
 gi|71910384|ref|YP_281934.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS5005]
 gi|13621927|gb|AAK33693.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|71853166|gb|AAZ51189.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS5005]
          Length = 910

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 548 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 599

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+  +       N        +I T    + + V 
Sbjct: 600 TDDGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVS 658

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G+K+ V+  HL 
Sbjct: 659 LSDKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLN 718

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +  +     V+ GDFN         
Sbjct: 719 SKRGDNALYGCVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI- 777

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D +    +   S   +  +  N   +D  ++ ++       +        
Sbjct: 778 ----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRHLLDHYEFDMVHV---- 829

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 830 NSPFMEAHGRASDHDPLLLQLSF 852


>gi|88854827|ref|ZP_01129493.1| probable 5'-nucleotidase precursor [marine actinobacterium
           PHSC20C1]
 gi|88815988|gb|EAR25844.1| probable 5'-nucleotidase precursor [marine actinobacterium
           PHSC20C1]
          Length = 1422

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 88/317 (27%), Gaps = 34/317 (10%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIV 69
           V     V    ++ ++N+                  T   +      +     +LDAD+V
Sbjct: 306 VASAPLVGGDFKVSAFNVFNYFTTLKSEDPDARGASTAEQFAIQQSKIVAAINSLDADVV 365

Query: 70  FLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKK 119
            LQE+ +          A+  +           T   +      ++  I      A+  K
Sbjct: 366 GLQEIENSIKLGGGLDEALMDLVGALNAAAGAGTWDYVRTPAELNDAAITDFITNAIIFK 425

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS- 178
              V           ++      R  +    + NG+ I V+  H KS     +       
Sbjct: 426 PASVTPVGDSFTQVDETVWDIA-REPIAQTFDSNGELITVIANHFKSKGGSGAEPADGQG 484

Query: 179 PSCSLLSQQA---QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
              +   +QA   + L D I+         V+ GDFN             +       + 
Sbjct: 485 RFNTERVEQATAVKALVDTISADSAKSDQVVLVGDFNSYSEEDPV-----QVFTSAGYVD 539

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
                 D +            +D+ ++  +    +   +   I   E   +         
Sbjct: 540 TLAASTDGQ-YTYTFDGELGSLDHIIVSPSLADKVTDAAVWNINSPEWGDRGYAFGATEA 598

Query: 290 ---KRLSDHCPISIDYD 303
               R SDH PISI   
Sbjct: 599 GTVFRSSDHDPISIGLS 615


>gi|229149012|ref|ZP_04277257.1| Sphingomyelinase C [Bacillus cereus m1550]
 gi|228634552|gb|EEK91136.1| Sphingomyelinase C [Bacillus cereus m1550]
          Length = 333

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 100/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +    D      Y K  + D+V L E+ 
Sbjct: 29  VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERVDLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + I V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|229068359|ref|ZP_04201662.1| Sphingomyelinase C [Bacillus cereus F65185]
 gi|228714820|gb|EEL66692.1| Sphingomyelinase C [Bacillus cereus F65185]
          Length = 333

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|29349191|ref|NP_812694.1| hypothetical protein BT_3783 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341099|gb|AAO78888.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides thetaiotaomicron VPI-5482]
          Length = 315

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 83/324 (25%), Gaps = 35/324 (10%)

Query: 1   MIRKYVLALVF---FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M  + +L +V        C +     + + S+N+   +  +               Y ++
Sbjct: 1   MKLRNLLFIVLAAIVFCNCQSYQPTSLTVASYNLRNANGSDSARGDG-----WGQRYPVI 55

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            Q  +  D DI   QE   +           +                S     T     
Sbjct: 56  AQMVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDI 115

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +         P + +K  +     R       +        L  +L         +   
Sbjct: 116 VEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKAR 171

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIR 236
             S  L+ ++ + L           +P ++ GDFN    +   +    K  +  +     
Sbjct: 172 VESAFLVQEKMKELGR------GKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCD 225

Query: 237 FPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFL---------------IQESFSEILY 280
           +    +   N           ID+  +  + +                   +E   +   
Sbjct: 226 YRYALNGTFNNFDPNSFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPE 285

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
                    +  SDH P+ ++  F
Sbjct: 286 EITIKAYEARTPSDHFPVKVELVF 309


>gi|327189443|gb|EGE56605.1| putative metal-dependent hydrolase protein [Rhizobium etli
           CNPAF512]
          Length = 239

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 86/286 (30%), Gaps = 54/286 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++L+++N+++    +              D   +        ADIV LQE+       
Sbjct: 4   KSIKLLTYNVHSCIGNDR-----------KLDPGRIASVIAEAGADIVALQEV-----RR 47

Query: 82  KVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +    +   +  S  ++  H     S  +     A+         ++ PL          
Sbjct: 48  RTGGIDQAYLIASLLKMQAHFHPALSVAEEQYGDAIITALPTSAVKAGPLPSIG------ 101

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQK 198
             R A+ + V +  +K+ V++ HL                     +Q   L +  W+   
Sbjct: 102 EQRGALSVEVLVGDRKLLVVNTHLGLRG-------------RERIRQMTTLLNSGWLRGA 148

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            E  +P V+ GDFN   +         +++              +      +    + +D
Sbjct: 149 MEEPLPCVLCGDFNAIPSSAT-YRLVARSLKDAQL-----GGTAAPRATFPSRYPLMRLD 202

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +  +  +                        K  SDH P+  +  F
Sbjct: 203 HIFVTDDLVVKRAAV----------LQNRLTKVASDHLPLFAEISF 238


>gi|229077987|ref|ZP_04210596.1| Sphingomyelinase C [Bacillus cereus Rock4-2]
 gi|228705325|gb|EEL57702.1| Sphingomyelinase C [Bacillus cereus Rock4-2]
          Length = 333

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSPN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|45124783|emb|CAF33353.1| sphingomyelinase C [Bacillus cereus]
          Length = 338

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 34  VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 87

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 88  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 147

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 148 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 202

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 203 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 262

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 322

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 323 NDYSDHYPVEATIS 336


>gi|282880129|ref|ZP_06288849.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281306002|gb|EFA98042.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 311

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/320 (11%), Positives = 80/320 (25%), Gaps = 34/320 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K+ L  VF L       AQ + + ++N+   +E +            T    ++  + 
Sbjct: 1   MKKFALT-VFILTASLCIQAQNLFVATYNLRYDNEDDRQEGNG-----WTKRCQVICDFL 54

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI   QE   +         + +                S               
Sbjct: 55  NFEQPDIFGTQEGLKHQLEDLKRGLDQYDYIGIGREDGKEQGEHSAIFYKKDKLKCFDKG 114

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                  P       +  A  R             +     +L                 
Sbjct: 115 NFWLNETPEKPVL-GWDAACVRICTWGKFRDWKTNLTFYFFNLHMDHVG----------V 163

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
               + A+ +   I +   +  P ++ GDFN   +           I  +  +    +  
Sbjct: 164 VARREAAKLVIKKIKEIAGNNAPVILTGDFNVDQHDEIYKIFSESGILKDSYVAAKHRFA 223

Query: 242 DSRCNANKNLRNK--IPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRG------- 289
           ++    + +   K    ID+  +          +  +++         +KS         
Sbjct: 224 ENGTFQDFDSSMKSESRIDHIFVSNKFEVNNYAIHTDAYWTANEKMPKLKSGNAPKELEF 283

Query: 290 -----KRLSDHCPISIDYDF 304
                +  SDH P+     +
Sbjct: 284 QQYTHRLPSDHYPVLAKIRY 303


>gi|228906427|ref|ZP_04070310.1| Sphingomyelinase C [Bacillus thuringiensis IBL 200]
 gi|228853243|gb|EEM98017.1| Sphingomyelinase C [Bacillus thuringiensis IBL 200]
          Length = 333

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N        N        +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|223040783|ref|ZP_03611050.1| putative endonuclease/exonuclease/phosphatase [Campylobacter rectus
           RM3267]
 gi|222877973|gb|EEF13087.1| putative endonuclease/exonuclease/phosphatase [Campylobacter rectus
           RM3267]
          Length = 445

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 107/310 (34%), Gaps = 56/310 (18%)

Query: 6   VLALVFFLVPCTASVAQ-KVRLVSWNINTLSE--QEGVSLWKNSVKRTT-------SDYT 55
           + AL+F  +      A  ++++ ++N   L +   +G       V ++        + + 
Sbjct: 8   LFALIFAALFFVVFAAGAELKIATFNAQNLFDAKNDGSEYKDFVVGKSEWSEKKASAKFK 67

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            +    K L+ADI+ LQE+ +   + ++  + ++  F  +                  +A
Sbjct: 68  TVSAKIKELNADIIALQEIENEQILKELMREASYKYFAFSNSKNGP----------VGLA 117

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           V  +      + + +            R  + L  E+NG+K  +L++H  +         
Sbjct: 118 VLSRVKPEKTRIFSVP-------NVKTRDILRLDFEVNGQKFSLLNLHFPARKNP----- 165

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                     +Q +     +          V+ GDFN          D   + +  +  +
Sbjct: 166 ---------LKQRKTAFITLKSALTDTEKVVVLGDFNAPYGDKELLGDLAASKNLANLWV 216

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             PK      +   +  +   +D+ ++ ++   +  +  SF   L         G ++SD
Sbjct: 217 FLPK------HERYSHTSNNALDHVLLSKDALSQNYVLNSFKVEL--------DGAQISD 262

Query: 295 HCPISIDYDF 304
           H  +    +F
Sbjct: 263 HFALVFRLNF 272


>gi|283779137|ref|YP_003369892.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
 gi|283437590|gb|ADB16032.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
          Length = 307

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 95/316 (30%), Gaps = 42/316 (13%)

Query: 4   KYVLALVFFLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
              LA    L+  +   A      Q +R++S+NI   + ++G   W +           +
Sbjct: 12  SISLAFAAVLLTNSGEAAEPTSEPQPLRVMSYNIRYGTARDGDDAWVHRQ-------EPM 64

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            +Y K    DI+ LQE  ++     +     +                S           
Sbjct: 65  VKYLKESKVDILGLQEALAFQISDLLEGLPEFKRSGVARDDGKDKGEFSPLLYRHERFEL 124

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +       +   +     +     R      ++        +        F    +   
Sbjct: 125 VREGTFWLSATHEVVGSKGWDAMLPRVCSWTELKDKSTGKRFIAASTH---FDHMGQEAR 181

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTID 229
           + S  L++++ + L           +P V+ GDFN ++      +          W+ +D
Sbjct: 182 AESGKLIARRLKELAA--------DLPVVLVGDFNARLASDPIQNVLAKPDSASDWRLVD 233

Query: 230 PNDSLIRFPKEKDSRCNANKN-LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                 + P    +  N  K        ID+  +      F++ +   E           
Sbjct: 234 AQGVSAKKPTGPTATFNGFKAIPEGDNKIDFIFVR----DFVVLDHVVENPLT-----PA 284

Query: 289 GKRLSDHCPISIDYDF 304
           G+ +SDH P+  + +F
Sbjct: 285 GRFVSDHLPVIANIEF 300


>gi|327312514|ref|YP_004327951.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
 gi|326944378|gb|AEA20263.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
          Length = 290

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 79/308 (25%), Gaps = 30/308 (9%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M R  +  L   ++   +  AQ++ + ++NI   +  +                  L  +
Sbjct: 1   MYR--LTTLFLAMLLTCSLSAQQLYVGTYNIRYDNPNDRKEGNA-----WAQRCPQLCDF 53

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                  +   QE+ +      +     +                +       +     +
Sbjct: 54  INFEQPAVFGTQEVLATQLHDLLQGLEGYDYIGVGRDDGREEGEYAAIFYRKDLLKLLDS 113

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYS 178
                   P   +   +  A  R       E    GK+ +  + H+              
Sbjct: 114 GNFWLSQTPDHPSL-GWDAACIRICTWGKFEDKTTGKQFYFFNTHM-----DHVGTVARR 167

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S  L+ Q+   L            P ++ GDFN               I  +       
Sbjct: 168 ESTRLILQRIGQLAK--------SQPTILTGDFNVDQTDEIYGIFSRSAILRDCYAHARQ 219

Query: 239 KEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +   +    +    ++    ID+  +  +            I  N        + +SDH 
Sbjct: 220 RMAPTGTWNDFMQDSRSNARIDHVFVSSDFDIQHYA-----IFTNSYWFGKSRRNISDHY 274

Query: 297 PISIDYDF 304
           P+ +   F
Sbjct: 275 PVMVKLSF 282


>gi|21241443|ref|NP_641025.1| hypothetical protein XAC0672 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106782|gb|AAM35561.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 287

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 89/307 (28%), Gaps = 37/307 (12%)

Query: 4   KYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           + +LA+         ++A      +R++S+N+        V    +  KR       +  
Sbjct: 10  RCLLAIGALSCIALPALAGTPVAPLRVMSFNVR-------VPADTDGDKRWQVRRAAMVA 62

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             K    D+   QE+ S  A         +  F    R  +  +          +    +
Sbjct: 63  LIKQTHPDVFGTQELVSEQAAFLAEQLPDYRWFGQGRRGDDSDEHM-GVFYDARVLEVVE 121

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTY 177
           +        P      ++     R A   L E   + ++ ++ + H       D  E   
Sbjct: 122 SGDFWLSDTPERAGSITWGNVLPRMATWALFERRSDKRRFYLFNTHFPYR---DEDEPAR 178

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             S  L+  +   L         + +P V+ GDFN   +           +  +      
Sbjct: 179 ERSARLILSRIAQL--------PATIPVVLTGDFNSDPD--KITYPTLTAVLRDARAQAS 228

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            +        +        ID+ +                  +   D +  G   SDH P
Sbjct: 229 KRSGPENTFQDFTTHPTRRIDWILYRG----------LRPSRFATLDDRPGGILPSDHYP 278

Query: 298 ISIDYDF 304
           +  ++++
Sbjct: 279 VMAEFEW 285


>gi|229171459|ref|ZP_04299043.1| Sphingomyelinase C [Bacillus cereus MM3]
 gi|228611997|gb|EEK69235.1| Sphingomyelinase C [Bacillus cereus MM3]
          Length = 333

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           + +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 83  NNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKEYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|262383745|ref|ZP_06076881.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262294643|gb|EEY82575.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 287

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 96/313 (30%), Gaps = 41/313 (13%)

Query: 2   IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           +++ +L L+  L       A    +K+ ++S+NI   +  +  + W     +   D+   
Sbjct: 1   MKRILLCLMVVLFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQW-----KFRRDFA-- 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               K  +AD+   QE+ +      +     +                +           
Sbjct: 54  ADLVKFHEADVFGAQEVLNNQLNDLLDRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175
           +K+             K  +  A  R A   +++    GKK + L+ HL         + 
Sbjct: 114 EKSGNFWLAEDINAVGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPN 231
                 SL+ +QA+ L           +P ++ GDFN   +             + +  +
Sbjct: 169 ARHEGASLVLEQAKKL--------SENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHS 220

Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            ++  F    +   +         +  IDY  +  N            + +         
Sbjct: 221 RTIAGFTYGPEWTFHDFGKIPYDKREWIDYIFVKGN---------IKVLRHGVLTETLNN 271

Query: 290 KRLSDHCPISIDY 302
              SDHCP+    
Sbjct: 272 LFPSDHCPVISTL 284


>gi|333031000|ref|ZP_08459061.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
 gi|332741597|gb|EGJ72079.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
          Length = 302

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 92/327 (28%), Gaps = 49/327 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L L FF+      +AQ +R+ S+NI   +E +  +      +R            
Sbjct: 1   MKKLAL-LFFFIAVTLGGLAQDLRVGSYNIRYANEGDAQNGN-GWAQRCPVQIQ----LI 54

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    D++  QE+     +  +     +                +       I  RK  +
Sbjct: 55  RYNAFDVLGTQEVLHPQLLDLLAGLPEYDYIGVGRDDGKTEGEYAP------IFYRKDKI 108

Query: 122 RVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
             L+  +  L  + ++   G      R            GK  W  ++H+          
Sbjct: 109 ECLKSGHFWLSEETTYPNKGWDAALPRICTWGEFRDLKTGKSFWYFNLHMDHVG------ 162

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                        A  +   IT+      P ++ GDFN    +          I  +   
Sbjct: 163 ------VEARKHSASLVLSKITEMCGE-EPVILTGDFNVDQTHNSYKILHDSDILQDSYE 215

Query: 235 IRFPKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---------------LIQESFSE 277
           +       +      N+  +    ID+  +                      +      +
Sbjct: 216 VAEICYALNGTFNAFNINLRTDSRIDHVFVSPTFQVKKYGVLTDTYRSTNKEIKTVHEGD 275

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +  +  SDH P+ ++ +F
Sbjct: 276 FPKEVSFEVNEARLPSDHFPLVVELNF 302


>gi|325920888|ref|ZP_08182783.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865]
 gi|325548640|gb|EGD19599.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865]
          Length = 572

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 88/324 (27%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+N+       G      +       ++  +    L   
Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVST 315

Query: 61  AKNLDADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +       AVA++             + ++      ++ I   I 
Sbjct: 316 IVPLRADVAALMELENDGNGADTAVAQLVAALNAAGKDKDWQFVDTGSGPGDDAIRVGIV 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +        G    V+  H KS  C   S 
Sbjct: 376 YRSTQVTPVGKPATLTGGPFDSH---SRVPLAQAFRSTRGATFVVVANHFKSKGCGTASG 432

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L  W+            V+ GDFN              
Sbjct: 433 ADADQRDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMESPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L       I  +  D  
Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGMSGRLDHALLSPAMAKQLRGAVEWHINADVMDDA 547

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 548 GYAKRNLAGPWRSSDHDPVLLGFS 571


>gi|323126982|gb|ADX24279.1| endonuclease/exonuclease/phosphatase family surface anchored
           protein [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 941

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 83/323 (25%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 563 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 614

Query: 81  AK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                                    T+  +       N        +I T    +   V 
Sbjct: 615 TDDGTTDATQSAQRLIDAIQKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPDRVS 673

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G K+ V+  HL 
Sbjct: 674 LSDKPKGGAKDALSWVNGELNLSVGRIDPTNPAWKDVRKSLAAEFVFQGNKVIVVANHLN 733

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +        V+ GDFN         
Sbjct: 734 SKRGDNALYGRVQPVTFKSEERRHVLANMLAKFAKEGATHQANIVMLGDFNDYEFTKTI- 792

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D      +   +   +     N   +D  ++  N       +        
Sbjct: 793 ----QLIEEGDMANLVSRHDLADRYSYFYQGNNQTLDNMLVSHNLLGQYEFDMVHV---- 844

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 845 NSPFMEVHGRASDHDPLLLQLSF 867


>gi|251782127|ref|YP_002996429.1| extracellular nuclease [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390756|dbj|BAH81215.1| extracellular nuclease [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 941

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 83/323 (25%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 563 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 614

Query: 81  AK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                                    T+  +       N        +I T    +   V 
Sbjct: 615 TDDGTTDATQSAQRLIDAIQKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPDRVS 673

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G K+ V+  HL 
Sbjct: 674 LSDKPKGGAKDALSWVNGELNLSVGRIDPTNPAWKDVRKSLAAEFVFQGNKVIVVANHLN 733

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +        V+ GDFN         
Sbjct: 734 SKRGDNALYGRVQPVTFKSEERRHVLANMLAKFAKEGATHQANIVMLGDFNDYEFTKTI- 792

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D      +   +   +     N   +D  ++  N       +        
Sbjct: 793 ----QLIEEGDMANLVSRHDLADRYSYFYQGNNQTLDNMLVSHNLLGQYEFDMVHV---- 844

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 845 NSPFMEVHGRASDHDPLLLQLSF 867


>gi|327537315|gb|EGF24049.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula
           baltica WH47]
          Length = 275

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 86/288 (29%), Gaps = 32/288 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             +    +++N+  L+  +   L      R +     +        AD+  LQE+     
Sbjct: 14  ADESFTAMTYNVRYLNTHDRQDL---WSMRRSKVIETIAS------ADVAGLQEVTVQQL 64

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    W  +             +             +  +     P +     +  
Sbjct: 65  HDIQEGTPEWTWYGVGRDDGKEGGEFAPIGYRHDRFEAMDHGTLWLSETPTVVGSKGWDA 124

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           A  R    +++    +K+   +  + +  F    +N    S  L++ +           +
Sbjct: 125 ALPRTMTWMVLR---RKLDRAEFLVINSHFDHRGQNAREQSGRLVAAEVDQ--------R 173

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            + +P ++ GDFN   +             K +D  D +   P       N  K ++   
Sbjct: 174 ATDLPVIVMGDFNAMPDSAPLKALQSGEKVKLLDARDEVDGKPTGPTGTWNGFKAIQPDR 233

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ID+ +++             +     D     G+  SDH PI+I  D
Sbjct: 234 RIDHVLVNDRV--------VVQEYRTLDPRTEAGRYASDHLPIAIRID 273


>gi|229016371|ref|ZP_04173315.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
 gi|229022601|ref|ZP_04179127.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
 gi|228738692|gb|EEL89162.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
 gi|228744927|gb|EEL94985.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
          Length = 788

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 84/312 (26%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 AINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVIANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N               +   
Sbjct: 661 QPLVLKSEEKRVQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFSKPLEALQGTILKD- 719

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 720 ----MLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|218901872|ref|YP_002449706.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH820]
 gi|218535992|gb|ACK88390.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH820]
          Length = 333

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|329928380|ref|ZP_08282250.1| 5'-nucleotidase, C-terminal domain protein [Paenibacillus sp. HGF5]
 gi|328937816|gb|EGG34222.1| 5'-nucleotidase, C-terminal domain protein [Paenibacillus sp. HGF5]
          Length = 2084

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 92/329 (27%), Gaps = 65/329 (19%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            A+++R+ ++NI              S  +       +    K+   DI+ L E+   N  
Sbjct: 824  AEQLRVATYNIENF-------YPGVSSAKINKLAESIVNNIKS--PDIIGLVEVQDNNGE 874

Query: 81   A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                               K     T+  F   E + N+       +I          V+
Sbjct: 875  QNNGTTAADQSYQTLINAIKAAGGPTY-SFTDIEPVNNNDGGAPGANIRVGFLYNADRVQ 933

Query: 123  VLQQS----------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
            +                           P      + +   +R+ +    E  G+K+ V+
Sbjct: 934  LTDSVQGKKGSPTESVAYDAATDQLTLNPGRIDPQNAAFNASRKPLAAQFEFQGEKVIVI 993

Query: 161  DIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK 214
              H  S            P    S +   Q A  +  ++            V+ GD N  
Sbjct: 994  ANHFNSKSGDQGPFGNTQPPVLSSETQRHQIAAVVNGFVKDVVSANPDANVVVLGDLNDF 1053

Query: 215  INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                  N      +  N+                    N   +D+ ++ +N      + +
Sbjct: 1054 QFTETTN-----ILKGNELDNLIETLPLKEQYTYTYDGNSQVLDHILVSKNL----TRST 1104

Query: 275  FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +I++   D  +   R+SDH P+    D
Sbjct: 1105 QVDIVHLNADFPASKGRVSDHDPVVAQID 1133


>gi|229028475|ref|ZP_04184596.1| Sphingomyelinase C [Bacillus cereus AH1271]
 gi|228732856|gb|EEL83717.1| Sphingomyelinase C [Bacillus cereus AH1271]
          Length = 333

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|326798495|ref|YP_004316314.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326549259|gb|ADZ77644.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 268

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 89/300 (29%), Gaps = 47/300 (15%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +L  +F     TA+    +R++++NI+  +      L          D   +        
Sbjct: 15  LLQFIFGAEIVTANEKDTLRIITYNIHHANPPSKPGL---------IDLEAIAAVINQNK 65

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D+V LQE+   N  +         +   T    +  K          +A+  K     +
Sbjct: 66  PDLVALQEVDVNNRRSGKNLNEAAALGSLTGMHHHFVKAIDYEGGAYGVAILSKWPIQQK 125

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            S  L  A+ S      R    + VE   GK +     HL                    
Sbjct: 126 DSLILPMAEGS--NGEPRVLAIVAVEPKPGKPLVFASTHLDLK-------------EQNR 170

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             QA+ +   ++       P ++ GDFN K             I+  D+     K   S 
Sbjct: 171 LLQAEAIVKKLSTYS---QPVILGGDFNAKPESD--------VINHFDTYFSRSKTSGSA 219

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +     ID+ +         ++    +  Y            SDH P+ ++  +
Sbjct: 220 AFTIPEVNPDREIDFIMFRPKKRFQSVRHEVIKEPY-----------ASDHLPVMVELTY 268


>gi|253566723|ref|ZP_04844175.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251944286|gb|EES84775.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 287

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 88/316 (27%), Gaps = 42/316 (13%)

Query: 1   MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M +  +L L FF   C      AS  + V ++S+NI   + ++ +  W+    R      
Sbjct: 1   MEKIILLVLPFFAASCGLVKQQASAPEPVNVMSFNIRYDNPEDSLDNWRYRKDR------ 54

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            +       D DI+  QE+              + +              S         
Sbjct: 55  -VANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVVGVGREDGKEKGEYSALWYKKDRF 113

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173
               +        P +     +  A  R A  + +  +++ K+ + L+ HL         
Sbjct: 114 NVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQDKVSDKEYFALNTHL-----DHVG 168

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTID 229
                   SL+  +   L D         +P ++ GDFN +               + + 
Sbjct: 169 GMARREGISLMLDRVNELSD--------GLPVIVTGDFNSEPESDVIKHVTDSANPEHLT 220

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                           +    +       IDY  +               + Y       
Sbjct: 221 DARQASSIVYGPSWSFHDFGKIPYNKRPLIDYVFVRNGL---------KVLRYGILAETE 271

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P+ +  +
Sbjct: 272 NNGFLSDHTPVLVTVE 287


>gi|265763129|ref|ZP_06091697.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255737|gb|EEZ27083.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 287

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 88/316 (27%), Gaps = 42/316 (13%)

Query: 1   MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M +  +L L FF   C      AS  + V ++S+NI   + ++ +  W+    R      
Sbjct: 1   MEKIILLVLPFFAASCGLVKQQASAPEPVNVMSFNIRYDNPEDSLDNWRYRKDR------ 54

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            +       D DI+  QE+              + +              S         
Sbjct: 55  -VANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVVGVGREDGKEKGEYSALWYKKDRF 113

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173
               +        P +     +  A  R A  + +  +++ K+ + L+ HL         
Sbjct: 114 NVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQDKVSDKEYFALNTHL-----DHVG 168

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTID 229
                   SL+  +   L D         +P ++ GDFN +               + + 
Sbjct: 169 GMARREGISLMLDRVNELSD--------GLPVIVTGDFNSEPESDVIKHVTDSVNPEHLT 220

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                           +    +       IDY  +               + Y       
Sbjct: 221 DARQASSIVYGPSWSFHDFGKIPYNKRPLIDYVFVRNGL---------KVLRYGILAETE 271

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P+ +  +
Sbjct: 272 NNGFLSDHTPVLVTVE 287


>gi|86141529|ref|ZP_01060075.1| hypothetical protein MED217_05907 [Leeuwenhoekiella blandensis
           MED217]
 gi|85832088|gb|EAQ50543.1| hypothetical protein MED217_05907 [Leeuwenhoekiella blandensis
           MED217]
          Length = 285

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 84/310 (27%), Gaps = 44/310 (14%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
               AL+ F         +++ + S+NI   S  +G+++W             L    + 
Sbjct: 6   SIAFALLLFSSANAQKSKRELVISSFNIRYNSPDDGINIW-------EQRKDWLTHSIRF 58

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
             AD++  QE+     +        +         +   +  +    ++AI  +K+   V
Sbjct: 59  HQADLIGTQEVTHTQLLDMEVLLPNYA-------HVGIGREGATQGEYSAIFYKKERFEV 111

Query: 124 LQ------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           L          P + A   +  A  R     L +     +     +              
Sbjct: 112 LDSNTFWLSETPDVVASKGWDAALPRIVTWALFKDKHSGVSFFHFNTHF----------D 161

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                     A  L   I +      P ++ GDFN               +      +  
Sbjct: 162 HRGKQARIASAALLTQKIKE-ITGTSPVLLTGDFNSSPKTEAIATLLSSGLKDPYLNLDA 220

Query: 238 PKEKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            +      +AN        +   IDY                  +     D +   + +S
Sbjct: 221 DQIYGPEYSANGWDATGRTSDSRIDYIFYSG---------GVQPLTLQILDGQRGERYIS 271

Query: 294 DHCPISIDYD 303
           DH P+    +
Sbjct: 272 DHFPVIAKVE 281


>gi|323344671|ref|ZP_08084895.1| endonuclease/exonuclease/phosphatase [Prevotella oralis ATCC 33269]
 gi|323093941|gb|EFZ36518.1| endonuclease/exonuclease/phosphatase [Prevotella oralis ATCC 33269]
          Length = 305

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/321 (10%), Positives = 84/321 (26%), Gaps = 35/321 (10%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M ++++L    F        AQ + + ++NI   ++ +               + ++   
Sbjct: 1   MKKQFILIFCLFCAI--GIQAQNLFVGTYNIRYDNDGDKKEGNG-----WERRWPIICDM 53

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               + DI   QE               +                +          + ++
Sbjct: 54  LNFEEPDIFGTQEAKVNQIHDLQKGLEGYNYIGVGRDDGKEKGEYAAIFYKKDKLTKIRS 113

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                   P    K  +  A  R         N  K+     +L                
Sbjct: 114 GNFWLNETPD-KPKLGWDAACIRICTWGEFMDNKDKLKFYFFNLHM----------DHIG 162

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                + A+ +   I +      P ++ GDFN   N           I  +       + 
Sbjct: 163 VVARRESAKLVIRKIKEITGGNAPVILTGDFNVDQNDEIFKIFSASGILKDSYSAAKMRF 222

Query: 241 KDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRG------ 289
            ++    + +   K    ID+  +          ++   +     +++++ S        
Sbjct: 223 AENGTFNDFDTELKTESRIDHIFVSPKFNVKRYGVLTNGYWTEKGSKENLSSNKAPKELK 282

Query: 290 ------KRLSDHCPISIDYDF 304
                 +  SDH P+ +   +
Sbjct: 283 FKKYARRTPSDHYPVLVKIAY 303


>gi|229917556|ref|YP_002886202.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
 gi|229468985|gb|ACQ70757.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
          Length = 1168

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/333 (11%), Positives = 85/333 (25%), Gaps = 60/333 (18%)

Query: 15   PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQE 73
                +   ++ + S+N+   S     +              L + +   L+  DI+ + E
Sbjct: 737  TFIEAEEDQLTIASYNLENFSNNIKETSD-------EKALKLAKAFVNELNSPDIIGVTE 789

Query: 74   MGSYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            +   +   K                       T+  + + +   N      + +I     
Sbjct: 790  VQDNDGQDKGAGSAADQSYQRLIDNIVAVGGKTYK-YVNIDPENNQDGGAPDANIRVGFL 848

Query: 116  VRKKNVRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
               + V + +                     P      + + + +R+ +    +  G+ +
Sbjct: 849  YDPERVSLTEGIPAGDATTAVGYADGKLTHNPGRIDPMNEAFSRSRKPLAAQFDFQGENV 908

Query: 158  WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK------KESLVPFVIAGDF 211
             V+  H  S         +  P       Q + +   +         K      V  GDF
Sbjct: 909  IVIANHWNSKGGDTGFFGSQQPVVLGSEVQRKKIAQVVHNFVADVKTKNPEANVVALGDF 968

Query: 212  NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
            N          D  +    +       K       +     N   +D+ ++         
Sbjct: 969  NDF-----EFSDALQIFKGDLMTNMVEKVPAVDRYSYVYQGNSQVLDHILVSNRLAASTK 1023

Query: 272  QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +          D      R SDH P+    DF
Sbjct: 1024 IDMIHV----NSDFTEMSGRASDHDPVLAQIDF 1052


>gi|325279089|ref|YP_004251631.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM
           20712]
 gi|324310898|gb|ADY31451.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM
           20712]
          Length = 286

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 86/308 (27%), Gaps = 31/308 (10%)

Query: 1   MIRKY-VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           M   +  L L    + CT    + +RL ++NI   +  +G + W +           +  
Sbjct: 1   MKNLFSTLILSLLALGCTQQQPESLRLATFNIRYDNSGDGPNSWPHRK-------DSICA 53

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           +   +D DI+ +QE+  +           + +          +   +      A      
Sbjct: 54  FIHRVDPDIIDMQEVLHHQLEVLKTGLPEYTVVGVGREDGKTAGEYAPIFFKQAKYTLLD 113

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                    P       +  A  R A  + ++       ++ ++     F          
Sbjct: 114 QNTFWLCEKPDSVGMVGWDAALTRIATWVKLQDKKTGQILMVVNTH---FDHIGTEARRN 170

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           S  L+ ++ + +            P ++ GDFN   ++              D+     K
Sbjct: 171 SALLIIEKIKEIV--------GTSPAILTGDFNVSEDWDAYKTITNNEFILKDAHKVAGK 222

Query: 240 EKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +   +        ID+  +                 Y      +    LSDH
Sbjct: 223 RTGVDFTYHNFGKIPAEKCEKIDFIFVTPQIRV--------ISSYIPFSQLNDTLFLSDH 274

Query: 296 CPISIDYD 303
            P  ++ +
Sbjct: 275 NPEIVELE 282


>gi|322411464|gb|EFY02372.1| endonuclease/exonuclease/phosphatase family surface anchored
           protein [Streptococcus dysgalactiae subsp. dysgalactiae
           ATCC 27957]
          Length = 941

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 84/323 (26%), Gaps = 59/323 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYNAV 80
           K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N  
Sbjct: 563 KLSIASYNIENFSANPSSTKD--------EKVKRIAESFIHDLNAPDIIGLIEVQDNNGP 614

Query: 81  AK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                                    T+  +       N        +I T    +   V 
Sbjct: 615 TDDGTTDATQSAQRLIDAIQKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPDRVS 673

Query: 123 VLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +  +                          + +    R+++       G K+ V+  HL 
Sbjct: 674 LSDKPKGGAKDALSWVNGELNLSVGRIDPTNPAWKDVRKSLAAEFVFQGNKVIVVANHLN 733

Query: 166 SFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           S    ++L          S       A  L  +  +        V+ GDFN         
Sbjct: 734 SKRGDNALYGRVQPVTFKSEERRHVLANMLAKFAKEGATHQANIVMLGDFNDYEFTKTI- 792

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               + I+  D      +   +   +     N   +D  ++ +N       +        
Sbjct: 793 ----QLIEEGDMANLVSRHDLADRYSYFYQGNNQTLDNMLVSRNLLGQYEFDMVHV---- 844

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    R SDH P+ +   F
Sbjct: 845 NSPFMEIHGRASDHDPLLLQLSF 867


>gi|229154750|ref|ZP_04282865.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
 gi|228628698|gb|EEK85410.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
          Length = 788

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|99032047|pdb|2DDR|A Chain A, Crystal Structure Of Sphingomyelinase From Bacillus Cereus
           With Calcium Ion
 gi|99032048|pdb|2DDR|B Chain B, Crystal Structure Of Sphingomyelinase From Bacillus Cereus
           With Calcium Ion
 gi|99032049|pdb|2DDR|C Chain C, Crystal Structure Of Sphingomyelinase From Bacillus Cereus
           With Calcium Ion
 gi|99032050|pdb|2DDR|D Chain D, Crystal Structure Of Sphingomyelinase From Bacillus Cereus
           With Calcium Ion
 gi|99032051|pdb|2DDS|A Chain A, Crystal Structure Of Sphingomyelinase From Bacillus Cereus
           With Cobalt Ion
 gi|99032052|pdb|2DDS|B Chain B, Crystal Structure Of Sphingomyelinase From Bacillus Cereus
           With Cobalt Ion
 gi|99032053|pdb|2DDS|C Chain C, Crystal Structure Of Sphingomyelinase From Bacillus Cereus
           With Cobalt Ion
 gi|99032054|pdb|2DDS|D Chain D, Crystal Structure Of Sphingomyelinase From Bacillus Cereus
           With Cobalt Ion
 gi|99032055|pdb|2DDT|A Chain A, Crystal Structure Of Sphingomyelinase From Bacillus Cereus
           With Magnesium Ion
 gi|99032056|pdb|2DDT|B Chain B, Crystal Structure Of Sphingomyelinase From Bacillus Cereus
           With Magnesium Ion
          Length = 306

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 2   VSTTQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 55

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 56  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 115

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 116 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 170

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N        N        +KT++ +         
Sbjct: 171 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 230

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 231 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 290

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 291 NDYSDHYPVEATIS 304


>gi|323463737|gb|ADX75890.1| endonuclease/exonuclease/phosphatase family protein [Staphylococcus
           pseudintermedius ED99]
          Length = 623

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/329 (13%), Positives = 88/329 (26%), Gaps = 61/329 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGS 76
               K+ + S+N+   S         +    +      L     N     DIV + E+  
Sbjct: 302 PSENKLTVASYNLENFS--------NDVKSSSDDKAQKLANGIVNHMKQPDIVGVTEVQD 353

Query: 77  YNAVAKV-----------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            N   K                      T+  + + +   N      + +I        +
Sbjct: 354 NNGPNKGSSDASASYKRLIQAIKDAGGPTYR-YVNIDPENNVDGGQPDANIRVGFLYNPE 412

Query: 120 NVRVLQQ------------------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
            V                         P        +    R+++    +  G+++  + 
Sbjct: 413 RVTFNDHIPAGDATTSVAYENNQLTRNPGRITPQDPAFEDVRKSLAAQFDFKGQQVIAIA 472

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKI 215
            H KS    D L  ++ P       Q   +   I       Q++      +  GD+N   
Sbjct: 473 NHWKSKRGDDGLFGSHQPVRLTSEPQRVEIAHRIGEFTAQVQQQNPNAAIISVGDYNDFQ 532

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                     KT +      +      ++  +     N   +D+ ++ ++  +    +  
Sbjct: 533 WSKP-----LKTFESYGLTNKVNDVPKNKRYSYVYQGNTQTLDHILVSEHLKRQTKLDMI 587

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   D      R SDH PI    DF
Sbjct: 588 HV----NSDFTDMAGRASDHDPILAQIDF 612


>gi|47567552|ref|ZP_00238263.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9241]
 gi|47555747|gb|EAL14087.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9241]
          Length = 788

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +           +    ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNIVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRIQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229028860|ref|ZP_04184961.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
 gi|228732431|gb|EEL83312.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
          Length = 788

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             K ++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229143782|ref|ZP_04272202.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
 gi|228639657|gb|EEK96067.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
          Length = 788

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDSVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229171829|ref|ZP_04299400.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
 gi|228611649|gb|EEK68900.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
          Length = 788

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             K ++  
Sbjct: 661 QPLVLKSEEKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKILEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|284992104|ref|YP_003410658.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
 gi|284065349|gb|ADB76287.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
          Length = 322

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 80/326 (24%), Gaps = 52/326 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+ +WN+  L   E     ++      +    L      +  D++ +QE+G+  A+A +
Sbjct: 2   VRIGTWNLENLFRPEDEDGPRDPAA-YEAKLAALAGVIARIQPDVLAVQEVGNPAALADL 60

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPLLGAKDSFSRAGN 142
             +                       I      R     V    ++P          AG 
Sbjct: 61  AER-----AGGEWHCTTAGVEPGQRPIRVGYLSRLPLTDVAEITAFPEKLDPIQVDDAGT 115

Query: 143 ------RRAVELLVEINGKKIWVLDIHLKS------FCFLDSLENTYSPSCSLLSQQAQW 190
                 R A+   V + G  I ++  HLKS                              
Sbjct: 116 RLAVMGRAALRARVAVGGTPIDLITCHLKSKLLTFPPGPDGRPRFDTRDEGERARAAVYA 175

Query: 191 LKDW-------------ITQKKESLVPFVIAGDFNRKINY-----------LGNNDDFWK 226
           L                +   +      ++ GD N                       + 
Sbjct: 176 LSRRAAEAATVRAAATDLLDGQGQDRRLLVLGDLNDVPEAATTQILQGPPGSEIGTGGFA 235

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEI----- 278
             D  D    +        +   + R +     ID+ ++       +             
Sbjct: 236 QPDRGDGQRLWNLAARIPADQRFSRRYRGRGELIDHILVSHALVHSVADGDVRTDGAGPT 295

Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303
               +D  +      SDH P+    D
Sbjct: 296 PSIEDDPSRREDAPGSDHRPVVAQID 321


>gi|225868757|ref|YP_002744705.1| endonuclease/exonuclease/phosphatase family surface anchored
           protein [Streptococcus equi subsp. zooepidemicus]
 gi|225702033|emb|CAW99629.1| endonuclease/exonuclease/phosphatase family surface anchored
           protein [Streptococcus equi subsp. zooepidemicus]
          Length = 926

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 89/325 (27%), Gaps = 59/325 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYN 78
             K+ + S+NI   S     +               + + +  +L+  DI+ L E+   N
Sbjct: 554 PSKLSIASYNIENFSANPSSTKD--------EKVRRIAESFIHDLNAPDIIGLIEVQDNN 605

Query: 79  AVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                                K     T+  +       N       ++I T    + + 
Sbjct: 606 GPTDDGTTDARQSAQRLIDAIKALGGPTYQ-YVDIAPENNADGGQPGSNIRTGFLYQPER 664

Query: 121 VRVLQQSYPLLGAKDSF-----------------SRAGNRRAVELLVEINGKKIWVLDIH 163
           V +  +    +     +                 +    R+++       G K+ V+  H
Sbjct: 665 VSLSDKPRGGVNDAVKWVNGELSLSVGRIDPTNPAWKSVRKSLAAEFIFQGHKVVVVANH 724

Query: 164 LKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           L S    +SL          S       A+ L  +  +        V+ GDFN       
Sbjct: 725 LNSKRGDNSLYGRVQPVTFKSEERRHVLARLLSQFTKEGASQQANIVMLGDFNDYEFTKT 784

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                 K I+         + + S   +     N   +D  ++ +N       +      
Sbjct: 785 I-----KLIEEGAMANLVSRHELSDRYSYFYRGNNQTLDNMLLSRNLLGHYEFDMVHV-- 837

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
                      R SDH P+ +   F
Sbjct: 838 --NSPFMEAHGRASDHDPLLLQLSF 860


>gi|319893216|ref|YP_004150091.1| Endonuclease/Exonuclease/phosphatase family protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162912|gb|ADV06455.1| Endonuclease/Exonuclease/phosphatase family protein [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 623

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 89/329 (27%), Gaps = 61/329 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGS 76
               K+ + S+N+   S         +    +      L     N     DIV + E+  
Sbjct: 302 PSENKLTVASYNLENFS--------NDVKSSSDDKAQKLANGIVNHMKQPDIVGVTEVQD 353

Query: 77  YNAVAKV-----------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            N   K                      T+  + + +   N      + +I        +
Sbjct: 354 NNGPNKGSSDASASYKRLIQAIKDAGGPTYR-YVNIDPENNVDGGQPDANIRVGFLYNPE 412

Query: 120 NVRVLQQ------------------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
            V                         P   A    +    R+++    +  G+++  + 
Sbjct: 413 RVTFNDHIPAGDATTSVAYENNQLTRNPGRIAPQDPAFEDVRKSLAAQFDFKGQQVIAIA 472

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKI 215
            H KS    D L  ++ P       Q   +   I       Q++      +  GD+N   
Sbjct: 473 NHWKSKRGDDGLFGSHQPVRLTSEPQRVEIAHRIGEFTAQVQQQNPNAAIISVGDYNDFQ 532

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                     KT +      +      ++  +     N   +D+ ++ ++  +    +  
Sbjct: 533 WSKP-----LKTFESYGLTNKVKDVPKNKRYSYVYQGNTQTLDHILVSEHLKRQTKLDMI 587

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   D      R SDH PI    DF
Sbjct: 588 HV----NSDFTDMAGRASDHDPILAQIDF 612


>gi|229177202|ref|ZP_04304590.1| Sphingomyelinase C [Bacillus cereus 172560W]
 gi|228606262|gb|EEK63695.1| Sphingomyelinase C [Bacillus cereus 172560W]
          Length = 333

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 100/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D++ L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVIILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N   + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|301311917|ref|ZP_07217839.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300830019|gb|EFK60667.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 287

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 96/313 (30%), Gaps = 41/313 (13%)

Query: 2   IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           +++ +L L+  L       A    +K+ ++S+NI   +  +  + W     +   D+   
Sbjct: 1   MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQW-----KFRRDFA-- 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               K  +AD+   QE+ +      +     +                +           
Sbjct: 54  ADLVKFHEADVFGAQEVLNNQLNDLLDRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175
           +K+             K  +  A  R A   +++    GKK + L+ HL         + 
Sbjct: 114 EKSGNFWLAEDINAVGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPN 231
                 SL+ +QA+ L           +P ++ GDFN   +             + +  +
Sbjct: 169 ARHEGASLVLEQAKKL--------SENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHS 220

Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            ++  F    +   +         +  IDY  +  N            + +         
Sbjct: 221 RTIAGFTYGPEWTFHDFGKIPYDKREWIDYIFVKGN---------IKVLRHGVLTETLNN 271

Query: 290 KRLSDHCPISIDY 302
              SDHCP+    
Sbjct: 272 LFPSDHCPVISTL 284


>gi|329964595|ref|ZP_08301649.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328524995|gb|EGF52047.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 286

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 86/318 (27%), Gaps = 50/318 (15%)

Query: 2   IRKYVLAL----VFFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           ++     L    +  L  C    A   Q + ++++NI   +  +  + WK          
Sbjct: 1   MKYTTFFLCACSILLLGSCKNQPAQNGQPLEVMTFNIRLDAPSDSANNWKYRK------- 53

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
               +       D++ +QE+              +            +         T  
Sbjct: 54  DNACKMIAYYQPDLLGMQEVCHNQMEDLKQGLPQYTALGVGRDDGKEAGEYCPVFFKTDR 113

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDS 172
               +        +P       +  + NR     ++  + NGKK    + HL      + 
Sbjct: 114 FTLVEYGNFSLSEHPDTIGIKGWDASYNRVTTWAVLQEKSNGKKFVYFNTHL-----DND 168

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            +        L+  + + +           VP +I GDFN + +         + ++   
Sbjct: 169 GKIARKEGVQLILNKIKEIA--------PDVPAIITGDFNCEPDEEP-----LQILEKGG 215

Query: 233 SLIRFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                     +   +             ++ IDY  +                 Y     
Sbjct: 216 MQNTSETAGITYGPSWSFHDFGRIPLDERVLIDYVFVTD---------GAKVNRYRVIQD 266

Query: 286 KSRGKRLSDHCPISIDYD 303
                 LSDHCP+ ++  
Sbjct: 267 APENGFLSDHCPVLVNLT 284


>gi|196047076|ref|ZP_03114294.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB108]
 gi|196022057|gb|EDX60746.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB108]
          Length = 333

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N K      N        +KT+  +         
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVKKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|153809025|ref|ZP_01961693.1| hypothetical protein BACCAC_03329 [Bacteroides caccae ATCC 43185]
 gi|149128358|gb|EDM19577.1| hypothetical protein BACCAC_03329 [Bacteroides caccae ATCC 43185]
          Length = 315

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 81/324 (25%), Gaps = 35/324 (10%)

Query: 1   MIRKYVLALVFFLVP---CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M  + +L +    V    C +     + + S+N+   +  +               Y ++
Sbjct: 1   MKLRSLLLIALVAVVFCGCHSYQPTSITVASYNLRNANGSDSAKGNG-----WGQRYPVI 55

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            +  +  D DI   QE   +           +                S     T     
Sbjct: 56  AKMVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDV 115

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +         P + +K  +     R       +        L  +L         +   
Sbjct: 116 IEKGDFWLSETPDVPSK-GWDAVLPRICSWGHFKCKDTGFEFLFFNLHM---DHIGKKAR 171

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIR 236
             S  L+  + + L           +P ++ GDFN    +   +    K  +  +     
Sbjct: 172 VESAYLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCD 225

Query: 237 FPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQE---------------SFSEILY 280
           F    +   N           ID+  +                            ++   
Sbjct: 226 FRYATNGTFNDFDPDSFTESRIDHVFVSPVFKVKRYGVLTDTYRSIRGNGGKKDATDCPE 285

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
             D    + +  SDH P+ ++  F
Sbjct: 286 EIDIKAYQARTPSDHFPVKVELVF 309


>gi|114764770|ref|ZP_01443953.1| alkaline phosphatase [Pelagibaca bermudensis HTCC2601]
 gi|114542819|gb|EAU45841.1| alkaline phosphatase [Roseovarius sp. HTCC2601]
          Length = 2191

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/333 (11%), Positives = 94/333 (28%), Gaps = 52/333 (15%)

Query: 14   VPCTASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDY-----TLLRQYA--KNL 64
            V    +   ++ + S+N+  L    ++  ++   +      D        +         
Sbjct: 1609 VSTLTAGEGELLIASYNVLNLDPVIEDEANILPGTYNAVDDDLGDGRFDAIANQIVSNLN 1668

Query: 65   DADIVFLQEMGSYNAVA-------------------KVFPKNTWCIFYSTERLINHSKRD 105
              DI+ LQE+                                T+    +T    + S   
Sbjct: 1669 TPDIIGLQEIQDNTGAEGTDDVTSASDTLQQLIDSIAAAGGPTYAYIDNTFIADDTSGGI 1728

Query: 106  SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEINGKKIWVLDIHL 164
               +I TA     + V V++ S   + ++D+ +     R  +        +++ V++ H 
Sbjct: 1729 PGGNIRTAYLYNPERVSVVEGSVRTISSQDAGAAFEGGRLPLVASFAFGDEEVTVVNNHF 1788

Query: 165  KSFCFLDSLENTYSP------------SCSLLSQQAQWLKDWITQKKESL--VPFVIAGD 210
             S      +                  +      Q+  ++ ++ +          V+ GD
Sbjct: 1789 SSKSGSAPIMGIDQEFADLQEDPSVNGAVDERQAQSAEVQGFVDELLAEDGAANVVVLGD 1848

Query: 211  FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
            FN             + ++ +  +       +    +     N   +D+ ++  N     
Sbjct: 1849 FNEFEFVSP-----LEELEGSGLVNLTNSLPEDERYSYSFQGNSQSLDHILVSNNLGLDA 1903

Query: 271  IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++         +     +  SDH P+     
Sbjct: 1904 EFDAVHV----NSEFAVTDESASDHDPVLAKVS 1932


>gi|206967557|ref|ZP_03228513.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH1134]
 gi|206736477|gb|EDZ53624.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH1134]
          Length = 333

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 100/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N   + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|229188882|ref|ZP_04315915.1| Sphingomyelinase C [Bacillus cereus ATCC 10876]
 gi|228594587|gb|EEK52373.1| Sphingomyelinase C [Bacillus cereus ATCC 10876]
          Length = 333

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 100/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N   + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKYMY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|317478482|ref|ZP_07937642.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|316905371|gb|EFV27165.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 287

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 86/319 (26%), Gaps = 51/319 (15%)

Query: 2   IRKYVLALVFFLVP--------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           +R   L L F  +          +A   Q + ++++N+      + V+ W          
Sbjct: 1   MRYTTLLLCFCSILLLGSCKSQPSAQNGQPLEVMTFNVRLDIPSDSVNNWNYRKGDA--- 57

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
                +       D++ +QE+              +            +         T 
Sbjct: 58  ----CRMIAYYSPDLLGMQEVLHNQMEDLKRGLPQYTALGVGRDDGKEAGEYCPIFFRTD 113

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLD 171
                +         P       +  + NR     ++  + NG+K    + HL      +
Sbjct: 114 RFTLVEYGNFSLSEQPETIGIKGWDASYNRVTTWAILQEKNNGQKFVYFNTHL-----DN 168

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
             +        L+  + + +           +P +I GDFN             +T++  
Sbjct: 169 DGKTARKEGVQLILDKIKEIA--------PDMPAIITGDFNCTPGEEP-----LQTLEKG 215

Query: 232 DSLIRFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                      +   +             ++ +DY  + +               Y    
Sbjct: 216 GMENAAKTAAVTYGPSWSFHDFGRLPVEERVLLDYVFVTK---------GAKIDRYRVIQ 266

Query: 285 IKSRGKRLSDHCPISIDYD 303
            K     LSDHCPI ++  
Sbjct: 267 DKPENSYLSDHCPILVELT 285


>gi|218235001|ref|YP_002365840.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264]
 gi|218162958|gb|ACK62950.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus B4264]
          Length = 788

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ + +     G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAVEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|228984258|ref|ZP_04144440.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228775545|gb|EEM23929.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 788

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNAVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|261408212|ref|YP_003244453.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10]
 gi|261284675|gb|ACX66646.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10]
          Length = 494

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 89/311 (28%), Gaps = 42/311 (13%)

Query: 1   MIRKYVLALVFFLV----PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           M+  ++                + +  ++++S+N+   +        +  V R       
Sbjct: 11  MMLTFLTTASLSASGEMGSTAEASSGPLKVMSFNLRYAANDSQPWENRRPVTR------- 63

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                     D++  QE      V        +       R             +T    
Sbjct: 64  --NLILEHQPDVIGTQEGLHRQIVDLENDLPGYDRIGVG-REGGSLGEYMAIFYNTDRLT 120

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
             +         P   +  S+     R A  +  +   NGK  ++++ HL          
Sbjct: 121 PLEQSHFWLSDTPQTISSASWGNQIPRMATWVRFQDLRNGKTFYMVNTHLDH-------- 172

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND-S 233
                S     + A  + D +    +  +P VI GDFN        +      +     +
Sbjct: 173 ----QSEVSRQKSAALIVDKMKAF-DPDIPVVITGDFNTLPGSDTYSIFTSNGLSDAHVT 227

Query: 234 LIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             +   +     +  K+     +   ID+ +  Q          ++ +     + K  G+
Sbjct: 228 AKKRTNDDLGTFHNYKDPTGGGSGNRIDWILHGQ---------GWNILHSEIINYKEDGQ 278

Query: 291 RLSDHCPISID 301
             SDH P+ ++
Sbjct: 279 YPSDHYPVMME 289


>gi|209547425|ref|YP_002279343.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538669|gb|ACI58603.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 242

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 80/287 (27%), Gaps = 49/287 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + +RL+++N+++    +              D   +        ADIV LQE+     
Sbjct: 2   AEKSIRLLTYNVHSCIGSDR-----------KLDPGRIASVIAEAQADIVALQEVDVLRR 50

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                 +          +   H       + +   A+         ++ PL         
Sbjct: 51  RTGGIDQAHMIASLLEMQAHFHPALSVAEEQY-GDAIITALPTGAVKAGPLPSIG----- 104

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQ 197
              R A+ + + +  +K+ V++ HL                     +Q   L +  W+  
Sbjct: 105 -EQRGAISVEILVGDRKLLVVNTHLGLRG-------------RERMRQMTTLLNAGWLRG 150

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
             +  +P ++ GDFN   +         +++                          + +
Sbjct: 151 TADEPLPTILCGDFNAIPSSAT-YRLAARSLKDAQRA-----GNARPRATFPARYPLMRL 204

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           D+  +  +                        +  SDH P+  +  F
Sbjct: 205 DHVFVTDDLIVKQ----------ATVLENRLARVASDHLPLLAEIAF 241


>gi|329847963|ref|ZP_08262991.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis
           biprosthecum C19]
 gi|328843026|gb|EGF92595.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis
           biprosthecum C19]
          Length = 278

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 90/314 (28%), Gaps = 52/314 (16%)

Query: 2   IRKYVLALVFFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           ++ Y+   +  L  C     +  Q +R++S+NI   ++ +                  L 
Sbjct: 1   MKIYIPVALLSLTACATLPEAAPQTLRVMSYNIRYANDAD--------RPNWGERREALA 52

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +     D DI+ +QE               +  +          + D  N   T +  R+
Sbjct: 53  KQVAFTDPDILGVQEAQPVQVAYLAAQWPGYDHY-------GLGRDDGVNGETTTLFWRR 105

Query: 119 KNVRVLQQSYPLLGAKD-----SFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLD 171
                + +S+             +  A  R    L++   ++GK + V + HL       
Sbjct: 106 DRFETVSKSHQWCSPTPDRPGKGWDAAWPRTITRLVLRDRLSGKVLDVRNTHL------- 158

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 +         A+ +   +    ES    ++ GD N   +           +   
Sbjct: 159 -----DNEGAVARENCAKQVAGIV---VESGALVIVLGDMNSGPDSAPYRVLTGDALGLK 210

Query: 232 DSLIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
           D+      +       N           ID+  + +               Y        
Sbjct: 211 DARKAATVDFGPPGTFNGFDLSATQGEAIDHIFVPRGLA---------VTRYGVLTDSFS 261

Query: 289 GKRLSDHCPISIDY 302
           GK +SDH P+  D 
Sbjct: 262 GKVISDHFPVVADI 275


>gi|261404204|ref|YP_003240445.1| 5'-Nucleotidase domain-containing protein [Paenibacillus sp.
            Y412MC10]
 gi|261280667|gb|ACX62638.1| 5'-Nucleotidase domain protein [Paenibacillus sp. Y412MC10]
          Length = 2084

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 87/329 (26%), Gaps = 65/329 (19%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            A+++R+ ++NI              S  +       +    K+   DI+ L E+   N  
Sbjct: 824  AEQLRVATYNIENF-------YPGVSSAKINKLAESIVNNIKS--PDIIGLVEVQDNNGE 874

Query: 81   A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                               K     T+  F   E   N+       +I          ++
Sbjct: 875  QNNGTTAADQSYQTLINAIKAAGGPTY-SFTDIEPENNNDGGAPGANIRVGFLYNADRIQ 933

Query: 123  VLQQS----------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
            +                           P      + +   +R+ +    E  G+K+ V+
Sbjct: 934  LSDSVQGKKGSPTESVAYDAAKDQLTLNPGRIDPQNAAFNASRKPLAAQFEFQGEKVIVI 993

Query: 161  DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK------KESLVPFVIAGDFNRK 214
              H  S            P       Q   +   +                V+ GD N  
Sbjct: 994  ANHFNSKSGDQGPFGNTQPPVLSSETQRHQIAAVVNSFVKDVVSANPDANIVVLGDLNDF 1053

Query: 215  INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                    +    +  N+                    N   +D+ ++ +N      + +
Sbjct: 1054 QFT-----ETANILKGNELDNLIETLPLKEQYTYTYDGNSQVLDHILVSKNL----TRST 1104

Query: 275  FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +I++   D  +   R+SDH P+    D
Sbjct: 1105 QVDIVHLNADFPASKGRVSDHDPVVAQID 1133


>gi|218896127|ref|YP_002444538.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842]
 gi|218542051|gb|ACK94445.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842]
          Length = 788

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         +S      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAVVPKLLDKNVVRIGDESSLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             K ++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|163938601|ref|YP_001643485.1| sphingomyelin phosphodiesterase [Bacillus weihenstephanensis KBAB4]
 gi|163860798|gb|ABY41857.1| Sphingomyelin phosphodiesterase [Bacillus weihenstephanensis KBAB4]
          Length = 333

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 101/313 (32%), Gaps = 37/313 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+  
Sbjct: 30  STNQNDTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVFD 83

Query: 77  YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            +A  ++           T         E         S+      +A+  K   V +  
Sbjct: 84  NSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQ 143

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y +           N+  V   V+ N + + V+  HL++    DS+    SP+ S+ ++Q
Sbjct: 144 Y-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVRTKQ 198

Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            Q ++++I  +   +    +I GD N        N        +KT+  +          
Sbjct: 199 LQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSNSEYASMFKTLHASVPSYTGHTAT 258

Query: 242 DSRC-----NANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKR--- 291
                      N        +DY +  ++     F+                   K    
Sbjct: 259 WDATTNSIAKYNYPDAPAEHLDYIIASKDHANPSFVENNVLQVKSPKWSVTSWFKKYTYD 318

Query: 292 -LSDHCPISIDYD 303
             SDH P+     
Sbjct: 319 DYSDHYPVEATIS 331


>gi|229042920|ref|ZP_04190653.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
 gi|228726385|gb|EEL77609.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
          Length = 788

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229108638|ref|ZP_04238249.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
 gi|228674779|gb|EEL30012.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
          Length = 788

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229126482|ref|ZP_04255496.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
 gi|228656871|gb|EEL12695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
          Length = 788

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|165872719|ref|ZP_02217348.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0488]
 gi|167635172|ref|ZP_02393488.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0442]
 gi|167640897|ref|ZP_02399155.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0193]
 gi|170689667|ref|ZP_02880846.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0465]
 gi|170709382|ref|ZP_02899794.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0389]
 gi|177652826|ref|ZP_02935199.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0174]
 gi|190568515|ref|ZP_03021421.1| sphingomyelin phosphodiesterase C [Bacillus anthracis
           Tsiankovskii-I]
 gi|196035669|ref|ZP_03103072.1| sphingomyelin phosphodiesterase C [Bacillus cereus W]
 gi|227816451|ref|YP_002816460.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. CDC 684]
 gi|228932107|ref|ZP_04094998.1| Sphingomyelinase C [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|229120326|ref|ZP_04249576.1| Sphingomyelinase C [Bacillus cereus 95/8201]
 gi|229600728|ref|YP_002865273.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0248]
 gi|254684245|ref|ZP_05148105.1| sphingomyelinase C [Bacillus anthracis str. CNEVA-9066]
 gi|254725906|ref|ZP_05187688.1| sphingomyelinase C [Bacillus anthracis str. A1055]
 gi|254734392|ref|ZP_05192105.1| sphingomyelinase C [Bacillus anthracis str. Western North America
           USA6153]
 gi|254742078|ref|ZP_05199765.1| sphingomyelinase C [Bacillus anthracis str. Kruger B]
 gi|254754935|ref|ZP_05206969.1| sphingomyelinase C [Bacillus anthracis str. Vollum]
 gi|254762334|ref|ZP_05214178.1| sphingomyelinase C [Bacillus anthracis str. Australia 94]
 gi|301052327|ref|YP_003790538.1| sphingomyelinase [Bacillus anthracis CI]
 gi|164711580|gb|EDR17128.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0488]
 gi|167511117|gb|EDR86505.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0193]
 gi|167529431|gb|EDR92182.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0442]
 gi|170125703|gb|EDS94618.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0389]
 gi|170666368|gb|EDT17152.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0465]
 gi|172081860|gb|EDT66929.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0174]
 gi|190560309|gb|EDV14288.1| sphingomyelin phosphodiesterase C [Bacillus anthracis
           Tsiankovskii-I]
 gi|195991636|gb|EDX55601.1| sphingomyelin phosphodiesterase C [Bacillus cereus W]
 gi|227005668|gb|ACP15411.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. CDC 684]
 gi|228663136|gb|EEL18726.1| Sphingomyelinase C [Bacillus cereus 95/8201]
 gi|228827535|gb|EEM73278.1| Sphingomyelinase C [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|229265136|gb|ACQ46773.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0248]
 gi|300374496|gb|ADK03400.1| sphingomyelinase [Bacillus cereus biovar anthracis str. CI]
          Length = 333

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|30019227|ref|NP_830858.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 14579]
 gi|29894770|gb|AAP08059.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 14579]
          Length = 738

 Score =  113 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 439 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 490

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 491 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 550

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 551 LAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 610

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 611 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 665

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 666 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 721

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 722 VSDHDPVLAQID 733


>gi|327441388|dbj|BAK17753.1| predicted extracellular nuclease [Solibacillus silvestris StLB046]
          Length = 1177

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 94/328 (28%), Gaps = 60/328 (18%)

Query: 18   ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG 75
              VA K+ L S+NI   S  +  +        +      +     N     DI+ L E+ 
Sbjct: 746  EPVADKLNLASYNIENFSNNKDNT--------SDEKAAKIASTFVNNMKSPDIITLVEVQ 797

Query: 76   SYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
              +                     KV     +        + N S      +I       
Sbjct: 798  DNDGQTDSGNADASESYLRLINAIKVAGGPQYDW-IDVMPINNTSGGAPGGNIRVGYLYN 856

Query: 118  KKNVRVLQQSYPLLGAKDSFSRAG----------------NRRAVELLVEINGKKIWVLD 161
             + V ++          ++++  G                 R+ +    E   +++ V+ 
Sbjct: 857  PERVSLVDGINGTGKQANAWTEKGSLALNPGFVNPSKFEDTRKPIAAEFEFQEERVVVIG 916

Query: 162  IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKI 215
             HL S    DSL +   P    S     + AQ + D+I +          V+AGD N   
Sbjct: 917  AHLNSKGGDDSLWSPTQPPVLGSEPERIELAQVINDFIDEGLAKDPDVNIVVAGDMNDF- 975

Query: 216  NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                      +T+          K       +     N   +D+ ++  N  +    +  
Sbjct: 976  ----EFTPALETLKGGVLTNMVDKAPVEDRFSYYFQGNNQVLDHILVSNNLAEVTEIDMI 1031

Query: 276  SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    +      R SDH P+ +  D
Sbjct: 1032 HI----NANFTEAQGRASDHDPVLVQID 1055


>gi|228919906|ref|ZP_04083261.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228839722|gb|EEM85008.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 788

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|315644659|ref|ZP_07897790.1| 5'-Nucleotidase domain protein [Paenibacillus vortex V453]
 gi|315279918|gb|EFU43217.1| 5'-Nucleotidase domain protein [Paenibacillus vortex V453]
          Length = 2086

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/331 (13%), Positives = 91/331 (27%), Gaps = 69/331 (20%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN 78
            A+++R+ ++NI       G            S    L +   +     DI+ L E+   N
Sbjct: 825  AEQLRVATYNIENFYPGVGS-----------SKINKLAESIVSSIKSPDIIGLVEVQDNN 873

Query: 79   AVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                                 K     T+  F   + + N+       +I          
Sbjct: 874  GEQNNGTTAADLSYDALIKAIKAAGGPTY-SFTDIDPVNNNDGGAPGANIRVGFLYNPDR 932

Query: 121  VRVLQQSY----------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
            V++                           P      + +   +R+ +    E  G+K+ 
Sbjct: 933  VQLSDSVNNKKGSSTDSVAYDAAKDQLTYNPGRIDPQNPAFNASRKPLAAQFEFRGEKVI 992

Query: 159  VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFN 212
            V+  H  S            P    S +   Q A  +  ++            V+ GD N
Sbjct: 993  VIANHFNSKSGDQGPFGNTQPPVLSSEAQRHQIAAVVNGFVKSVVTANPDANVVVLGDLN 1052

Query: 213  RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                           +  N+                    N   +D+ ++ +N      +
Sbjct: 1053 DFQFT-----QTATILKGNELDNLIDTLPLKEQYTYTYDGNSQVLDHILVSKNL----TR 1103

Query: 273  ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +  ++++   D  +   R+SDH P+    D
Sbjct: 1104 STQVDVVHLNADFPASKGRVSDHDPVVAQID 1134


>gi|120436892|ref|YP_862578.1| endonuclease/exonuclease/phosphatase family protein [Gramella
           forsetii KT0803]
 gi|117579042|emb|CAL67511.1| endonuclease/exonuclease/phosphatase family protein [Gramella
           forsetii KT0803]
          Length = 276

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 96/309 (31%), Gaps = 41/309 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K++L L F  +  T    Q++ ++++NI   +E +G + W       +     +    
Sbjct: 1   MKKFLLILSFLFI-TTGVTCQEIEVMTYNIKYANENDGENSW-------SQRKEWITDQI 52

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +  + D++ +QE             + +    +  +++   +   +    +AI  +    
Sbjct: 53  QFYEPDVLGVQEAVKSQ-------LDFFTENINNYKVLGVGREGEDKGEFSAILYKSDKF 105

Query: 122 RVLQQSYPLLGAKDS-----FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            VL+ +   L          +    NR     L +    +  +   +       D     
Sbjct: 106 DVLKSNTFWLSETPEKISKGWDADYNRICTYALFQEKESEKKIWVFNTHFDHVGD----- 160

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                    + ++ +   I +     +P  + GDFN +    G      + ++ +     
Sbjct: 161 -----KARLESSKLIIQKIKELNREALPVFLMGDFNLEQESEGI-RLISEFMEKSKEKAD 214

Query: 237 FPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           F    +   N           IDY                    Y         K  SDH
Sbjct: 215 FKFGPEGTFNGYNFTEAVTRRIDYIF---------TNNQVHIKKYAVLSDSKNLKYPSDH 265

Query: 296 CPISIDYDF 304
            P+ I  DF
Sbjct: 266 FPVLIIADF 274


>gi|228906812|ref|ZP_04070681.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           200]
 gi|228852816|gb|EEM97601.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           200]
          Length = 788

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|228925864|ref|ZP_04088948.1| Sphingomyelinase C [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228833879|gb|EEM79432.1| Sphingomyelinase C [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
          Length = 333

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|228957450|ref|ZP_04119204.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228802204|gb|EEM49067.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 788

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229068731|ref|ZP_04202028.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
 gi|228714348|gb|EEL66226.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
          Length = 788

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229078378|ref|ZP_04210941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
 gi|228704919|gb|EEL57342.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
          Length = 788

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229149383|ref|ZP_04277619.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
 gi|228634025|gb|EEK90618.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
          Length = 788

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229165616|ref|ZP_04293389.1| Sphingomyelinase C [Bacillus cereus AH621]
 gi|228617851|gb|EEK74903.1| Sphingomyelinase C [Bacillus cereus AH621]
          Length = 333

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 100/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSK---------RDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T  L   S            S+      +A+  K   V + 
Sbjct: 83  DNSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ + + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKDDRFVHVIGTHLQA---EDSMCGKNSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNRINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKR-- 291
                       N        +DY +  ++     F+                   K   
Sbjct: 258 TWDATTNSIAKYNYPDAPAEHLDYIIASKDHANPSFVENNVLQVKSPKWSVTSWFKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 DDYSDHYPVEATIS 331


>gi|284992406|ref|YP_003410960.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
 gi|284065651|gb|ADB76589.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
          Length = 278

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 76/301 (25%), Gaps = 45/301 (14%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---G 75
           + A  +R+++WN+                       T +         D+  LQE+    
Sbjct: 2   ADADGLRVLTWNLWW------------RFGAWQDRQTAIEAELAAARPDVCALQEVWIGP 49

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             +    +  +       +         +R  +  I  A AV  +        + L    
Sbjct: 50  EGDQAELLAGRLGMHAVVAPSPAPGRWQRRLGDPAIGFANAVLSRWPITRSAVHELPAHP 109

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  +   +   G  + V    L S               +    Q + +  +
Sbjct: 110 GEDGE---RTVLHAEIAAPGGTVDVFTTQLDSAP----------DRSATRCAQVEEVVRF 156

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRCNANKNL 251
           +  +  +  P V+ GD N + +              + P   L+   +            
Sbjct: 157 VAARAGTAHPPVVTGDLNAEPDSDEIRRLCGHKTAPVVPGTVLVDAWRYAGPDEAGWTWD 216

Query: 252 R----------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           R              IDY ++                +    D    G   SDHC +  +
Sbjct: 217 RRNPHVAATFEPSARIDYVLVGPPTAG---GRGHVRGVRLVGDRPVDGVWPSDHCGVLAE 273

Query: 302 Y 302
            
Sbjct: 274 L 274


>gi|116249399|ref|YP_765240.1| hypothetical protein pRL120737 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254049|emb|CAK12446.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 242

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 83/285 (29%), Gaps = 49/285 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++L+++N+++    +              D   +       +ADIV LQE+       
Sbjct: 4   KSIKLLTYNVHSCIGGDR-----------KLDPGRIASVIAEAEADIVALQEVDVLRRRT 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +          +   H       + +   A+         ++ PL           
Sbjct: 53  GGVDQAHAIASLLKMQAHFHPALSIAEEQY-GDAIITSLPTGAVKAGPLPSIG------E 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199
            R A+ + + +  +K+ V++ HL                     +Q   L +  W+    
Sbjct: 106 QRGAISVEILVGNRKLLVVNTHLGLRG-------------RERIRQMTTLLNPGWLRGTA 152

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +  +P ++ GDFN   +         +++              +      +    + +D+
Sbjct: 153 DEPLPTILCGDFNAIPSSAT-YRLAARSLKDVQLA-----GGAAPRATFPSRYPLMRLDH 206

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +                        +  SDH P+  +  F
Sbjct: 207 IFVTDDLIVKKAAV----------LENRLTRIASDHLPLLAEIGF 241


>gi|332186411|ref|ZP_08388155.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas
           sp. S17]
 gi|332013394|gb|EGI55455.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas
           sp. S17]
          Length = 276

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 78/289 (26%), Gaps = 29/289 (10%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              ++A+ ++++++N+   S++          +R  +   ++ +  +    D++  QE+ 
Sbjct: 11  PVGAMAETLKVMTFNVRYASDEG--------AERWAARRPVMVELIRRAVPDVIGTQELL 62

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  V     +  F   +R+  H                           P +    
Sbjct: 63  QRQGDDIVRALPGYRWF-GRDRMGGHDDEHMGIFYRPDRLTLVDQGDFWLSDTPEVVGSQ 121

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S+     R A   + E    K              D        + +L+  +   L    
Sbjct: 122 SWGTDLPRMASWAVFETKDAKPRRFLFVDTHLAHRDEDAEARDKAAALILARLPTLAK-- 179

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                  +P ++AGD N + +            D      R  +E       +       
Sbjct: 180 ------GLPVILAGDMNARPDTAAYRRFAGALTDCWLGAKR--REGPEMTFHDFTGTPDR 231

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            IDY  +            F       D         SDH P+     F
Sbjct: 232 RIDYLFLRG----------FRADAIATDTWHRGKTYPSDHFPVRATLSF 270


>gi|324325200|gb|ADY20460.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 788

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 84/312 (26%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   ++     P V+ GD N             K ++  
Sbjct: 661 QPLVLKSEEKRIQLAQEVNQFVQDIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|228938309|ref|ZP_04100922.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971187|ref|ZP_04131818.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228977796|ref|ZP_04138180.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228781906|gb|EEM30100.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228788514|gb|EEM36462.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228821346|gb|EEM67358.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326938818|gb|AEA14714.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 788

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 86/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   Q+K +  P V+ GD N             K ++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNHFVQGIQEKNTNAPVVVLGDMNDFEFSKP-----LKALEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|91787699|ref|YP_548651.1| exodeoxyribonuclease III [Polaromonas sp. JS666]
 gi|91696924|gb|ABE43753.1| Exodeoxyribonuclease III [Polaromonas sp. JS666]
          Length = 267

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 86/307 (28%), Gaps = 68/307 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +++ +WN+N+L+                     +  +      D++ LQE+   +  
Sbjct: 5   TKTMKIATWNVNSLA----------------VRLPQVLDWLAANPVDVLCLQELKLSDD- 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                               +         +  +A+  +                 F+  
Sbjct: 48  ---------KFPLQALADAGYQSAVFGQKTYNGVAILSRTPARNIVKNIA-----GFTDE 93

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +R  +   ++    ++ V++ +  +     + +  Y        +    L+ W+ ++  
Sbjct: 94  QSR-VIAATLDTPSGEVRVVNGYFVNGQAPGTEKFEYK------MRWLDGLRAWLREELA 146

Query: 201 SLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDS------------LIRFPKEKDSRCN 246
                V+ GDFN   +     D     +TI                 L    +  +    
Sbjct: 147 EHSRLVLVGDFNITADDRDTYDAQGLHETIHHTADERQHLQALLGLGLHDAFRLFEQPEK 206

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY ++       +            D +  + +R SDH P
Sbjct: 207 TYSWWDYREFAFRRNRGLRIDYILVSNALKPAVKSCLI-------DKLPRKNERPSDHAP 259

Query: 298 ISIDYDF 304
           +  + D+
Sbjct: 260 VVAELDW 266


>gi|86146808|ref|ZP_01065128.1| putative phospholipase C precursor [Vibrio sp. MED222]
 gi|85835458|gb|EAQ53596.1| putative phospholipase C precursor [Vibrio sp. MED222]
          Length = 444

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 91/296 (30%), Gaps = 36/296 (12%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
               A  ++++++NI  L                   Y L+ QY K    D++ LQE+ +
Sbjct: 174 PEPDANTLKVMTYNIWALPAIASHIGD---------RYDLIPQYVKGY--DVLALQEVFA 222

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 +   +    + +     +         I   I  R   V   Q  +P     D 
Sbjct: 223 NGRDEFLRELSKEYPYQTKMLDKDGINIYDGGVI---IVSRYPIVNEAQYVFPDCTGTDC 279

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F+           +  NG+   V   H  SF    + +           +Q + L   + 
Sbjct: 280 FADK---GVNYAEIIKNGQAYHVFGTHTASFDTDTARDYRQRQ-----FKQMRQLAQSLE 331

Query: 197 QKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251
               +    + +GDFN   + +  +    +  +  ++    +     S  +   N     
Sbjct: 332 --IPTSETVIYSGDFNVNKLKFPDDYQQMFANLQADEPT--YSGYTASTFDPRINNFAGE 387

Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 N   +DY V+     +     +  ++  +      +   LSDH P+S   
Sbjct: 388 PMSGGENVEYLDYVVVSSEYAQKTHNNNRVDVPRSTSSELWKHYNLSDHFPVSAVI 443


>gi|228904025|ref|ZP_04068131.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           4222]
 gi|228855621|gb|EEN00175.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           4222]
          Length = 792

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 493 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 544

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 545 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 604

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         +S      R+ +       G+ + V+  HL S     +     
Sbjct: 605 LAAVPKLLDKNVVRIGDESSLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 664

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             K ++  
Sbjct: 665 QPLVLKSEDKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 719

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 720 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 775

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 776 VSDHDPVLAQID 787


>gi|75759359|ref|ZP_00739455.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74493126|gb|EAO56246.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 788

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         +S      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAAVPKLLDKNVVRIGDESSLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             K ++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|85711283|ref|ZP_01042342.1| Extracellular nuclease [Idiomarina baltica OS145]
 gi|85694784|gb|EAQ32723.1| Extracellular nuclease [Idiomarina baltica OS145]
          Length = 577

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 101/309 (32%), Gaps = 42/309 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKR------TTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +R+ S+N+  L   +G      + +              +     ++DAD+  L E+ + 
Sbjct: 283 LRISSFNVLNLFNGDGDKNGFPTERGAKSFDAYQRQQAKIVSALVDIDADVFGLMEVEND 342

Query: 78  -----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                +A+ ++  +               ++R  ++ I   +   +  V+ +  ++ +  
Sbjct: 343 GYGSDSAIVQLVNQLNEAQDSPYVIAEPRAQRLGDDQIAVGLIYNRNRVKPIGHAHTITQ 402

Query: 133 AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQ-- 187
                 R+G+R  +  ++E   +G++  V+  H KS     D+  N           Q  
Sbjct: 403 GPF---RSGSRPPLAQVLEDKQSGQQFTVIVNHFKSKGGCPDNGPNANQNDGQYCWNQQR 459

Query: 188 ---AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
              A  L +W+ Q        V+ GDFN                        F     + 
Sbjct: 460 LDSAAALIEWVKQNAFPAP--VLLGDFNAYYKEDPVQYIAN---------HGFSNVSRAD 508

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------KRLSDH 295
             +         +D+  +DQ     +          +E  + S            R SDH
Sbjct: 509 EYSYVFDSQAGALDHVFIDQGLTDSVKNVQHIHYNSDEPTVFSYQDTEYFKVGPYRSSDH 568

Query: 296 CPISIDYDF 304
            P+ ID +F
Sbjct: 569 DPVFIDVEF 577


>gi|229195383|ref|ZP_04322152.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
 gi|228588082|gb|EEK46131.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
          Length = 788

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|91793624|ref|YP_563275.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans
           OS217]
 gi|91715626|gb|ABE55552.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans
           OS217]
          Length = 942

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 97/331 (29%), Gaps = 51/331 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +V   +++ S+N+      +G+          +S          +    + +DAD+  L 
Sbjct: 453 AVDADMKVASFNVLNYFNGDGIGGGFPTDRGADSASEFARQKAKIVSAMQAIDADVYGLM 512

Query: 73  EMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQ 126
           E+ +      +A+A +       I     + I         D I   +  R   V     
Sbjct: 513 EIENDGFGSNSAIADLVNGLNSAIGEPRYQYIALDGPGIGTDAITVGMVYRGDKVTPEGA 572

Query: 127 SYPLLGAKDS--------FSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCF-----LD 171
           +  L  A           F+   NR  +      + +G++  V   HLKS         D
Sbjct: 573 AQVLTSANSPLDDNGQVLFNDTKNRPMLTQNFVHQASGEQFVVAVNHLKSKGSSCDALGD 632

Query: 172 SLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
              N    +C+   ++ A  +  W+          ++ GD N               ++ 
Sbjct: 633 PDLNDGQANCNVTRTRAATAVAQWLNTVYPEQQ-VLVIGDLNAYAKEDPI-----TALEQ 686

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289
                 F     S   +         +D+ +   +    ++      I  +E  I     
Sbjct: 687 GGFSELFQHLGHSNAYSYVFSGESGQLDHALASASLLDNVVAAQEWHINTDEPTILDYNE 746

Query: 290 ----------------KRLSDHCPISIDYDF 304
                            R SDH P+ +  +F
Sbjct: 747 EYKSAAQIANLYQGDAYRSSDHDPVIVSLNF 777


>gi|229159752|ref|ZP_04287760.1| Sphingomyelinase C [Bacillus cereus R309803]
 gi|228623689|gb|EEK80507.1| Sphingomyelinase C [Bacillus cereus R309803]
          Length = 333

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + DIV L E+ 
Sbjct: 29  TSTNQNDTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDIVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 83  DNSASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ + + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKRDDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    V  GD N        +        +K +  +         
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVVFGGDMNVNKINAENDSDSEYASMFKILHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKR-- 291
                       N        +DY +  ++     F+  +                K   
Sbjct: 258 TWDATTNSIAKYNYPDAPAEHLDYIIASKDHANPSFVENKVLQVKSPKWSVTSWFKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 DDYSDHYPVEATIS 331


>gi|189096065|pdb|2UYR|X Chain X, Crystal Structure Of Bacillus Cereus Sphingomyelinase
           Mutant :n57a
          Length = 306

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 2   ASTTQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 55

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 56  DASASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 115

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 116 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 170

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N        N        +KT++ +         
Sbjct: 171 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 230

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 231 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 290

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 291 NDYSDHYPVEATIS 304


>gi|291302648|ref|YP_003513926.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290571868|gb|ADD44833.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 278

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 87/307 (28%), Gaps = 59/307 (19%)

Query: 12  FLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           F    T + A      +R+ ++NI+  +  + V            D     +   +LDA 
Sbjct: 14  FTFTVTPAQAHDRPTTLRVATYNIHAGAGSDNVF-----------DVDRTAEAIASLDAS 62

Query: 68  IVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           ++ LQE+           +   ++       IF+     ++ +   +        A+   
Sbjct: 63  VISLQEVDVHWHSRSQWRDLATELATTLDMHIFFGPIYSLDPTTPGAPRREF-GNAILSS 121

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNR---RAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
              V  +++ +                   E+ +++NG  + V   HL            
Sbjct: 122 YPIVDAKNHEITRLSTQVPNPVPEPMPGFPEVEIDVNGTPVHVYSTHL-----------D 170

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y P  ++   Q   ++  +    +   P ++ GDFN            W+ +      + 
Sbjct: 171 YRPDPAVRQAQVADMRRIMRC--DHGEPQLLLGDFNAPP-EAPELRPLWRKLSD----VW 223

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
               +               IDY    +                      +     SDH 
Sbjct: 224 AKSGQPDPGYTYPASAPDRRIDYIAASKRFKVKSAA--------------TPTTLASDHL 269

Query: 297 PISIDYD 303
           P+  +  
Sbjct: 270 PVVAELT 276


>gi|229131623|ref|ZP_04260505.1| Sphingomyelinase C [Bacillus cereus BDRD-ST196]
 gi|228651849|gb|EEL07804.1| Sphingomyelinase C [Bacillus cereus BDRD-ST196]
          Length = 333

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 105/313 (33%), Gaps = 37/313 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+  
Sbjct: 30  STNQNDTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVFD 83

Query: 77  YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            +A  ++           T         E         S+      +A+  K   V +  
Sbjct: 84  NSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQ 143

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y +           N+  V   V+ N + + V+  HL++    D++    SP+ S+ ++Q
Sbjct: 144 Y-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQ 198

Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            Q ++++I  +   +    +I GD N        N        +KT+  +          
Sbjct: 199 LQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTAT 258

Query: 242 DSRC-----NANKNLRNKIPIDYFVMDQNAY-----KFLIQESFSEILYNEDDIKSRGKR 291
                      N        +DY +  ++       +  + +S S        +K     
Sbjct: 259 WDATTNSIAKYNFPDSPAEYLDYIITSKDHANPSYIENKVLQSKSPQWTVTSWLKEYTYN 318

Query: 292 -LSDHCPISIDYD 303
             SDH P+     
Sbjct: 319 DYSDHYPVEATIS 331


>gi|30260828|ref|NP_843205.1| sphingomyelinase C [Bacillus anthracis str. Ames]
 gi|47777842|ref|YP_017307.2| sphingomyelinase C [Bacillus anthracis str. 'Ames Ancestor']
 gi|228913366|ref|ZP_04076999.1| Sphingomyelinase C [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228944428|ref|ZP_04106801.1| Sphingomyelinase C [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|30254277|gb|AAP24691.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. Ames]
 gi|47551547|gb|AAT29782.2| sphingomyelin phosphodiesterase C [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|228815330|gb|EEM61578.1| Sphingomyelinase C [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228846275|gb|EEM91294.1| Sphingomyelinase C [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
          Length = 338

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 34  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 87

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 88  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 147

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 148 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 322

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 323 NDYSDHYPVEATIS 336


>gi|52144237|ref|YP_082591.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L]
 gi|51977706|gb|AAU19256.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L]
          Length = 788

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LTAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|300087680|ref|YP_003758202.1| endonuclease/exonuclease/phosphatase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527413|gb|ADJ25881.1| Endonuclease/exonuclease/phosphatase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 654

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 82/296 (27%), Gaps = 55/296 (18%)

Query: 11  FFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
               P  ++ A     +R+ ++N++      G             D   L Q  ++  AD
Sbjct: 410 LLAFPTPSATADNGMPLRVATYNLHNGFNAVG-----------KLDLEALAQNIEDSGAD 458

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V LQE+     V        W                 ++      A+  +       +
Sbjct: 459 VVALQEISRGWLVNGRVDMLEWLSRRLDMPY----YFGPSSGPFWGNALLSRYPITSAVN 514

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            PL            R  +  +++++G    V+ +HL                  +   Q
Sbjct: 515 VPLPSEGLPLE----RSFIAAILQVDGLNFQVIAVHLHHVEGDSD----------IRVAQ 560

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L D+  +   +    VI GDFN + N         K +            +      
Sbjct: 561 VSALLDFYNRSSRT----VIMGDFNAEPNDQEI-----KLMRAAGLRDIMLSLEPPPAYT 611

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++      IDY  +  +     +      I              SDH  +  D +
Sbjct: 612 FRSDDLFQRIDYIWVSPDL----VWSEVRLITGT----------ASDHRGVVADIE 653


>gi|229160143|ref|ZP_04288144.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
 gi|228623354|gb|EEK80179.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
          Length = 788

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             K ++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNHFVQGIQKKNANAPVVVLGDMNDFEFAKP-----LKALEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|330821279|ref|YP_004350141.1| endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3]
 gi|327373274|gb|AEA64629.1| endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3]
          Length = 645

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 86/319 (26%), Gaps = 47/319 (14%)

Query: 20  VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               +R+ S+N+ N  +       +     R              +      L AD++ L
Sbjct: 287 AQADLRVASFNVLNYFNGDGKGGGFDAPDNRGAPTYKEFQRQEAKIVNAITALQADVIGL 346

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPL 130
            E+ +         +          R+++        + I  A+    ++V       P+
Sbjct: 347 MEIANNGYGELSAVRQLAARLGDGWRVVDPGSEKLGGDAIKVALLYNSRSVE------PI 400

Query: 131 LGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP------SCS 182
             A        NR+ +       G  + + V+  HLKS    D+                
Sbjct: 401 GKAATLAIDNKNRQPLAQTFRRIGGARAVTVVVNHLKSKGCTDASGGDADQGDGQSCWNP 460

Query: 183 LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
              + A  + DW+       +    ++ GD N                +    +    + 
Sbjct: 461 TRVRAAGLVADWLAGNPTGVNGAGVLLIGDMNSYAKEDPI-----ALFEARGYVNLAARF 515

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------ 288
             +   +         +D+ +   +    +       I  +E  +               
Sbjct: 516 IGAGAYSYVFGGETGYLDHALASASLLPRVKAVHEWHINADEPVVLQYTLAYKSAEQQNS 575

Query: 289 -----GKRLSDHCPISIDY 302
                  R SDH P+ +D 
Sbjct: 576 FYAPDAYRSSDHDPVLVDL 594


>gi|301052723|ref|YP_003790934.1| endonuclease/exonuclease/phosphatase [Bacillus anthracis CI]
 gi|300374892|gb|ADK03796.1| endonuclease/exonuclease/phosphatase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 788

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229195000|ref|ZP_04321777.1| Sphingomyelinase C [Bacillus cereus m1293]
 gi|228588435|gb|EEK46476.1| Sphingomyelinase C [Bacillus cereus m1293]
          Length = 338

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 34  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 87

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 88  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 147

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 148 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTVTSWLKKYTY 322

Query: 292 --LSDHCPISIDYD 303
              SDH P++    
Sbjct: 323 DDYSDHYPVAATIS 336


>gi|255536406|ref|YP_003096777.1| hypothetical protein FIC_02282 [Flavobacteriaceae bacterium
           3519-10]
 gi|255342602|gb|ACU08715.1| hypothetical protein FIC_02282 [Flavobacteriaceae bacterium
           3519-10]
          Length = 302

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 90/306 (29%), Gaps = 33/306 (10%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M R   L +  F +  +   AQ ++++++NI    + +  + W+N             + 
Sbjct: 28  MKRLISLIMFVFCLTVS---AQNLKVMTYNIRLALDSDKENSWENRKTDA-------LKL 77

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 D++ +QE               +          ++    S     TA     ++
Sbjct: 78  LNYYHPDVLGVQEAVPQQMSDLKNGLAGYNFVGVGRDDGSNKGEYSAIFFDTAKLQVLQS 137

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                   P   +K  +  A NR     L +    +      ++    F          S
Sbjct: 138 GTFWLSETPEKPSK-GWDAAYNRICTFALFKTKKGRRKFWAFNVH---FDHVGNIAREKS 193

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            +L+  + + L           +P ++ GDFN             + +         P  
Sbjct: 194 AALILSKIKELN-------TKNLPVILTGDFNLTDKTTPM-KILSENLSDTYRNCAQPSY 245

Query: 241 KDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
             +      ++       IDY  +     K L  +S   I     D +      SDH P+
Sbjct: 246 GPTGTFTAFDVNKIPTERIDYIFI-----KHLKCKSHRTIN----DRRENLLYPSDHFPV 296

Query: 299 SIDYDF 304
             +  F
Sbjct: 297 MAELKF 302


>gi|296501782|ref|YP_003663482.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis BMB171]
 gi|296322834|gb|ADH05762.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis BMB171]
          Length = 788

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVSHFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|42780246|ref|NP_977493.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 10987]
 gi|42736165|gb|AAS40101.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus ATCC
           10987]
          Length = 788

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|53713044|ref|YP_099036.1| hypothetical protein BF1755 [Bacteroides fragilis YCH46]
 gi|52215909|dbj|BAD48502.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 287

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 89/316 (28%), Gaps = 42/316 (13%)

Query: 1   MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M +  +L L FF   C      AS  + V ++S+NI   + ++ +  W+    R      
Sbjct: 1   MEKIILLVLPFFAASCGLVKQQASAPEPVNVMSFNIRYDNPEDSLDNWRYRKDR------ 54

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            +       D DI+  QE+              + +              S         
Sbjct: 55  -VANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVVGVGREDGKEKGEYSALWYKKDRF 113

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173
               +        P +     +  A  R A  + +  +++ K+ + L+ HL         
Sbjct: 114 NVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQDKVSDKEYFALNTHL-----DHVG 168

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTID 229
                   SL+  +   L D         +P ++ GDFN ++              + + 
Sbjct: 169 GMARREGISLMLDRVNELSD--------GLPVIVTGDFNSELESDVIKHVTDSANPEHLT 220

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                           +    +       IDY  +               + Y       
Sbjct: 221 DARQASSIVYGPSWSFHDFGKIPYNKRPLIDYVFVRNGL---------KVLRYGILAETE 271

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P+ +  +
Sbjct: 272 NNGFLSDHTPVLVTVE 287


>gi|188575171|ref|YP_001912100.1| endonuclease/exonuclease/phosphatase family [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188519623|gb|ACD57568.1| endonuclease/exonuclease/phosphatase family [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 319

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 97/301 (32%), Gaps = 33/301 (10%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +LAL   L    AS    +R++S+N+        V +  +  KR T   T +    K   
Sbjct: 48  ILALCITLPAFAASAPAPLRVMSFNVR-------VPMDSDGDKRWTVRRTSMVALIKQAH 100

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D+   QE+    A         +  F    R     +         A++V +     L 
Sbjct: 101 PDVFGTQELVPEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSVIESGDFWL- 159

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              P +    S++    R     L E   + ++ ++L+ HL                 + 
Sbjct: 160 SETPEVPGSSSWNTDLPRMVTWALFERRNDKRRFYLLNTHLPH----------RDQDEAA 209

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
               A+ +   I     + +P V+ GDFN   +           +  +        +   
Sbjct: 210 REHGARVILSRIAT-LPADIPVVVTGDFNSDPDQGTYR--TLTAVLGDARAHVAKPQGPE 266

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +   N   +    ID+ +              +   ++  D +  G   SDH P+  +++
Sbjct: 267 KTFQNFTTQPTRRIDWILFRG----------LTPTRFSTLDARPGGILPSDHYPVLAEFE 316

Query: 304 F 304
           +
Sbjct: 317 W 317


>gi|229089738|ref|ZP_04220999.1| Sphingomyelinase C [Bacillus cereus Rock3-42]
 gi|228693637|gb|EEL47339.1| Sphingomyelinase C [Bacillus cereus Rock3-42]
          Length = 338

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 34  TSTDQNNTLKVMTHNVYMLSNN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVF 87

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 88  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 147

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 148 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 322

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 323 NDYSDHYPVEATIS 336


>gi|86610191|ref|YP_478953.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus
           sp. JA-2-3B'a(2-13)]
 gi|86558733|gb|ABD03690.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus
           sp. JA-2-3B'a(2-13)]
          Length = 840

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 96/329 (29%), Gaps = 50/329 (15%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK--------RTTSDYTLLRQYAKNLDAD 67
              SV   +R+ S+N+       G + + N+            T     L +  + +DAD
Sbjct: 333 NPPSVGGSLRVASFNLFNYFNTFGNACFPNNSSCQGASNATEFTRQRDKLIEAIRRMDAD 392

Query: 68  IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNV 121
           IV L E+ +      +++  +       +   T   +N    +   + I      +   V
Sbjct: 393 IVGLNELENDGYGSNSSIQDLVNGLNQVMGAGTYAFVNVGVPNLGGDAITNGFIYKPATV 452

Query: 122 RVLQQSYPLLGAKDSFSRAGNRR---AVELLVE--INGKKIWVLDIHLKSFCFLDSLENT 176
            +   + P       F++   R     + +      N     V+  H KS        + 
Sbjct: 453 EIAPGTNPAFLDTGEFTQGPGRFHRPPLAVTFRQRSNNATFTVVVNHFKSKVSPCDPIDN 512

Query: 177 YSPSCS---LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                +     ++ AQ L  W+       +    +I GD N             KT++  
Sbjct: 513 DPFQGNCNGNRTRAAQQLLSWLATNPTGSTDPDVLIMGDLNSYAMEDPI-----KTLEAG 567

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
             +            +         +D+ + + +    +   +   I  +E         
Sbjct: 568 GFINL----NGPNSYSFSFQGQWGSLDHALANSSLRPQVTGSAKWHINADEPVSLDYTLS 623

Query: 290 ---------------KRLSDHCPISIDYD 303
                           R SDH P+ +  +
Sbjct: 624 FKSPSQQSLFYASDPFRSSDHDPVLVGLN 652


>gi|130078|sp|P09599|PHL1_BACCE RecName: Full=Sphingomyelinase C; Short=SMase; AltName:
           Full=Cereolysin B; AltName: Full=SMPLC; AltName:
           Full=Sphingomyelin phosphodiesterase; Flags: Precursor
 gi|580755|emb|CAA45503.1| sphingomyelin phosphodiesterase [Bacillus cereus]
 gi|580761|emb|CAA31333.1| SMase [Bacillus cereus]
          Length = 333

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P++    
Sbjct: 318 DDYSDHYPVAATIS 331


>gi|218902274|ref|YP_002450108.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820]
 gi|218539755|gb|ACK92153.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820]
          Length = 788

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+ +  D
Sbjct: 772 VSDHDPVLVQID 783


>gi|228951535|ref|ZP_04113640.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228808100|gb|EEM54614.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 788

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ + +     G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAVEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|297565545|ref|YP_003684517.1| endonuclease/exonuclease/phosphatase [Meiothermus silvanus DSM
           9946]
 gi|296849994|gb|ADH63009.1| Endonuclease/exonuclease/phosphatase [Meiothermus silvanus DSM
           9946]
          Length = 601

 Score =  111 bits (278), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 34/304 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--N 78
              +R+ S+N+       G     N  +        L    + LDADIV L E+ +    
Sbjct: 304 GGSLRVASYNVLNYFTTLGARGASNQAE-LERQRAKLVAALRALDADIVGLIEIQNNGDA 362

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A+  +          S       +     + I  A+  +        +  P    +    
Sbjct: 363 ALEDLVRALN-TALGSDAYAALATGSLGTDQIKVALIYKP------ARVRPEGAFRIDDD 415

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLK 192
              +R  +         G +  V+  H KS     +             +L  +QAQ L 
Sbjct: 416 PIFSRPPLAQTFRDRATGGRFSVVVNHFKSKGCEGASGAETDTGQGCWNALRVRQAQRLL 475

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
            +I   + +    ++ GD N             K +              ++  +     
Sbjct: 476 TFINDLRATDPDVLVVGDLNAYAEEDP-----LKVLTGAGLENLILHISAAKRYSYVFNG 530

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------KRLSDHCPIS 299
               +D+ +   +    +   +   I  +E  +                  R SDH P+ 
Sbjct: 531 ESGNLDHALATSSLSSQVTGITEWHINADEPRVLDYNTEFKPDDRYAPTPFRSSDHDPLL 590

Query: 300 IDYD 303
           +  +
Sbjct: 591 VGLN 594


>gi|34499249|ref|NP_903464.1| hypothetical protein CV_3794 [Chromobacterium violaceum ATCC 12472]
 gi|34105100|gb|AAQ61456.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 637

 Score =  111 bits (278), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 102/324 (31%), Gaps = 52/324 (16%)

Query: 21  AQKVRLVSWNINTLSEQE--GVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEM 74
           A  +R+ S+N+      +  G         +T  D+      +    + LDAD++ L E+
Sbjct: 296 AGHLRVASFNVLNFFNGDGLGGGFPTERGAKTRDDFLRQKAKIVSAIRQLDADVLGLMEL 355

Query: 75  GS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQS 127
            +      +AV ++            +         +   + I T +  R   V+    +
Sbjct: 356 ENDGFGPQSAVKELVDALNAGQAADKQYRFVDPGLPKIGTDAITTGMLYRPSRVKPDGAA 415

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF----------LDSLENTY 177
             L           NR ++      +GKK+ ++  HLKS              D+     
Sbjct: 416 QALTVG----DPGKNRLSLAQTFAADGKKLTLVVNHLKSKGSSCDQVKVDGAPDADTGDG 471

Query: 178 SPSCSLLSQQ-AQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
             +C+L   Q A+ L  W  Q+   +    ++ GD N             +  +      
Sbjct: 472 QGNCNLTRVQAARDLVKWAKQRGASAKEGLLVMGDMNAYAKEDPI-----RAFEDGGLSN 526

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
              + +     +         +D+ + D +  K++       I  +E      G      
Sbjct: 527 LLARFQK-DAYSYVYQGESGNLDHALADASLVKWVADAGEWHINADEPTALEYGSEFKSA 585

Query: 290 -----------KRLSDHCPISIDY 302
                       R SDH P+ +D 
Sbjct: 586 EQRQNYYAPDAYRSSDHDPLYVDL 609


>gi|329922986|ref|ZP_08278502.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus
           sp. HGF5]
 gi|328941759|gb|EGG38044.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus
           sp. HGF5]
          Length = 494

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 88/311 (28%), Gaps = 42/311 (13%)

Query: 1   MIRKYVLALVFFLV----PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           M+  ++                + +  ++++S+N+   +        +  V R       
Sbjct: 11  MMLTFLTTASLSASGEMGSTAEASSGPLKVMSFNLRYAANDGQPWENRRPVTR------- 63

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                     D++  QE      V        +       R             +T    
Sbjct: 64  --NLILEHQPDVIGTQEGLHRQIVDLENDLPGYDRIGVG-REGGSLGEYMAIFYNTERLK 120

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
             +         P   +  S+     R A  +  +   NGK  ++++ HL          
Sbjct: 121 PLEQSHFWLSDTPQTISSASWGNQIPRMATWVRFQDLRNGKTFYMVNTHLDH-------- 172

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND-S 233
                S     + A  + D +    +  +P VI GDFN        +      +     +
Sbjct: 173 ----QSEVSRQKSAALIVDKMKSF-DPEIPVVITGDFNTLPASDTYSIFTNNGLSDAHVT 227

Query: 234 LIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             +   +     +  K+     +   ID+ +  Q          ++ +     + K   +
Sbjct: 228 AKKRTNDDLGTFHNYKDPTGGGSGNRIDWILHGQ---------GWNVLHSEIINYKEDDQ 278

Query: 291 RLSDHCPISID 301
             SDH P+ ++
Sbjct: 279 YPSDHYPVMME 289


>gi|332297419|ref|YP_004439341.1| Endonuclease/exonuclease/phosphatase [Treponema brennaborense DSM
           12168]
 gi|332180522|gb|AEE16210.1| Endonuclease/exonuclease/phosphatase [Treponema brennaborense DSM
           12168]
          Length = 358

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 110/325 (33%), Gaps = 33/325 (10%)

Query: 4   KYVLALVFFLVPC-TASVAQKVRLVSWNINTLSEQEGVSLWKN---------SVKRTTSD 53
             +L     LVP  T +    +R+VSWN+ T  + +                S+ + T+ 
Sbjct: 29  SLLLYGCGALVPGETGNSGTDIRVVSWNVQTFFDAQTAGTEYGEFRGPNTAWSLAKYTAR 88

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
              L    K LDADI+ LQE+ + + +  +        F +++    +    ++ D    
Sbjct: 89  LERLCGAIKRLDADILVLQEIENESVLRDIVN------FLASDNTYRYVCFAADGDGAIG 142

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDS 172
             V  +   V   +   + ++    +   R  +E+ V       + VL I         S
Sbjct: 143 CGVLSRLPVV-SGTVHQVDSRIHGVQPSLRPLLEITVSNTADVPVCVLLICHWKSKAGGS 201

Query: 173 LENTYSPSCSLL--SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                  +      + +A  L   +    E+ +P V+ GDFNR I     +    + +  
Sbjct: 202 DAAAVWQAAQERLAAIRAAELLYAVLPADENRLPVVLCGDFNRDIGEFTEDGADGRAVCM 261

Query: 231 ND----SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDI 285
           +     S        D+   +     N   ID+F +     +     ES        D  
Sbjct: 262 DGVSLKSGWLSFSSADTGAGSYFYRNNWEKIDHFFIAGAIDFVDFKAESDGPWSRLSDTG 321

Query: 286 --------KSRGKRLSDHCPISIDY 302
                      G+  SDH PI+  +
Sbjct: 322 VLVPFRYELWNGQGYSDHFPIAATF 346


>gi|222094804|ref|YP_002528864.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1]
 gi|221238862|gb|ACM11572.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1]
          Length = 788

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + L+   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPLHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|206976594|ref|ZP_03237500.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           H3081.97]
 gi|206745277|gb|EDZ56678.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           H3081.97]
          Length = 788

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + L+   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPLHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|217958656|ref|YP_002337204.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187]
 gi|229137866|ref|ZP_04266465.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
 gi|217063925|gb|ACJ78175.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187]
 gi|228645523|gb|EEL01756.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
          Length = 788

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + L+   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPLHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|194363979|ref|YP_002026589.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
 gi|194346783|gb|ACF49906.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
          Length = 481

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 94/326 (28%), Gaps = 36/326 (11%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS------VKRTTSDYTLLRQ 59
           VL L     P   +V   + + ++N+      +G      +           +    L  
Sbjct: 163 VLKLPELKRPAVPTVPGSLHVAAFNLENFFNGDGQGGGFPTLRGARTPDEHKAQVAKLVT 222

Query: 60  YAKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTA 113
               L AD+  L E+ +      +A+A++            +     +      + I   
Sbjct: 223 TVNALGADVAALMELENDGYGPQSAIAELVDALNRDRGGQGDWRFVDAGSGPGENPIRVG 282

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS-FCFLD 171
           I  R   ++ + +   L G         +R  +    +   G    V+  H KS  C   
Sbjct: 283 IIYRSTRLQPVGKPATLTGGPFVEH---SRVPLAQAFQGKQGAPFVVVANHFKSKGCRDA 339

Query: 172 SLENTYSPSCS-----LLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDF 224
           S  +                 AQ L  W+            V+ GDFN            
Sbjct: 340 SGADADRNDNQGCWNATRVTSAQQLHAWLQTDPTGTGAKDAVLLGDFNAYAMEDPI---- 395

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
            +T+        F   K     +         +D+ +++    K L   +      +E D
Sbjct: 396 -RTLHDLGWQDAFKVAKVEHPYSYVYNGYTGRLDHALLNPGMAKRLRGAAEWHSNADEQD 454

Query: 285 IKSRG-------KRLSDHCPISIDYD 303
                        R SDH P+ + +D
Sbjct: 455 ASGYQGRNVQGPWRSSDHDPLLLGFD 480


>gi|226310908|ref|YP_002770802.1| hypothetical protein BBR47_13210 [Brevibacillus brevis NBRC 100599]
 gi|226093856|dbj|BAH42298.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 1829

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/336 (11%), Positives = 86/336 (25%), Gaps = 66/336 (19%)

Query: 14   VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFL 71
            V   +    K+ + S+NI   S +              +    + +   +     DI+ +
Sbjct: 953  VTSISPKEDKLTIASYNIENFSAKTDS-----------AKINRIAETIVDNMKAPDIIGV 1001

Query: 72   QEMGSYNAVAKVFPKN-----------------TWCIFYSTERLINHSKRDSNNDIHTAI 114
             EM   N        +                     +       N        +I    
Sbjct: 1002 VEMQDNNGPTDNGQTDATQSADALIKAMENKNGPTYRYIDIAPQNNQDGGQPGGNIRVGF 1061

Query: 115  AVRKKNVRVLQ---------------------QSYPLLGAKDSFSRAGNRRAVELLVEIN 153
                  V++                          P      + + A +R+ +       
Sbjct: 1062 FYNPGRVQLAAGTPGGATDAVQIETRDGVAHLSHNPGRVDPTNAAFASSRKPLAAEFIFQ 1121

Query: 154  GKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVI 207
            G+ + V+  H  S     +L     P    S     + A+ L  ++ +    ++    V+
Sbjct: 1122 GEPVIVIANHFNSKGGDQALFGKDQPPQLVSEVQRMKIARVLNSFVKEIHSAQAKANVVV 1181

Query: 208  AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
             GD N             + +          K             N   +D  ++  +  
Sbjct: 1182 LGDLNDFPFSNPV-----QELADGVLTNMVEKLPKGEQYTYVYQGNSQVLDQILVSNHLE 1236

Query: 268  KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     +I++    +     R+SDH P+ +  D
Sbjct: 1237 DDTK----VDIVHINAGLTENEGRVSDHNPVLVQLD 1268


>gi|324324718|gb|ADY19978.1| sphingomyelinase C [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 333

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYMK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|254883467|ref|ZP_05256177.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA]
 gi|319641746|ref|ZP_07996428.1| metallophosphoesterase [Bacteroides sp. 3_1_40A]
 gi|254836260|gb|EET16569.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA]
 gi|317386633|gb|EFV67530.1| metallophosphoesterase [Bacteroides sp. 3_1_40A]
          Length = 251

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 94/304 (30%), Gaps = 66/304 (21%)

Query: 2   IRKYVLALVFFL----VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           ++K +L L+F +    +  +++    +R++S+NI+     +G             DY  +
Sbjct: 5   MKKLILCLLFLIVGVELHASSAHGDSLRIMSYNIHNGIGMDG-----------KVDYARI 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                +++ D+V LQE+ S    + V              +   +           +  +
Sbjct: 54  ANVISDVNPDVVALQELDSITHRSPVNVLEEIASVTGMNYVFGPAISYGGGKYGIGVMSK 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +K + V   S P         R   R  + +  E    K   L  H              
Sbjct: 114 EKPLNVRNVSLP--------GREEARTLLVVEFE----KYIFLATHFSLTAAD------- 154

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                    Q + ++  + +      P  +AGD N   + L   +               
Sbjct: 155 ---------QIKSIEVILKEVFSKEKPVFMAGDMNSVPSSLTQKNI-------RKYFKVL 198

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             ++   CN          IDY        K   + +       ED +       SDHCP
Sbjct: 199 TDDRWITCNG-------ECIDYIY---GYEKKKGKFAVRRKGRIEDHV------ASDHCP 242

Query: 298 ISID 301
           + +D
Sbjct: 243 VYVD 246


>gi|229177605|ref|ZP_04304982.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
 gi|228605795|gb|EEK63239.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
          Length = 788

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|206968309|ref|ZP_03229265.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           AH1134]
 gi|206737229|gb|EDZ54376.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           AH1134]
          Length = 788

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229183010|ref|ZP_04310242.1| Sphingomyelinase C [Bacillus cereus BGSC 6E1]
 gi|228600467|gb|EEK58055.1| Sphingomyelinase C [Bacillus cereus BGSC 6E1]
          Length = 338

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 34  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 87

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 88  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 147

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 148 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 322

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 323 DDYSDHYPVEATIS 336


>gi|229101435|ref|ZP_04232178.1| Sphingomyelinase C [Bacillus cereus Rock3-28]
 gi|228682011|gb|EEL36145.1| Sphingomyelinase C [Bacillus cereus Rock3-28]
          Length = 333

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TPTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKREYPNQTAVLGRSSGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N   + V+  HL++    DS+    SP+ S+ ++
Sbjct: 143 QY-VFEKGCGPDNLSNKGFVYTKIKKNDSFVHVIGTHLQA---EDSMCGKISPA-SVRTK 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q Q ++D+I  +   +    +I GD N        N        +KT+  +         
Sbjct: 198 QLQEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSHIENKVLQPKSPQWTVTSWFKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|256839412|ref|ZP_05544921.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256738342|gb|EEU51667.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 306

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 81/324 (25%), Gaps = 43/324 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K + + +F         A+ + + ++N+   +  +  +            Y  + Q  
Sbjct: 1   MKKVIYSFIFLFCAVLTLQAETMVVATYNLRNANGGDSTNGNG-----WGQRYPYIAQIV 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    DI   QE               +            +   S     T      K  
Sbjct: 56  QFHGFDIFGTQEGKYPQLQDLRQAMPGYDYIGVGRDDGKRAGEHSAIFYRTD-----KFE 110

Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +    + L    D     +     R                L  +L             
Sbjct: 111 VLEHGDFWLSEITDRPNKGWDAVLPRICTWGEFRDKQTGFTFLFFNLHMDHVG------- 163

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                  ++ A+ + + I +     +P ++ GDFN               I  +   I  
Sbjct: 164 ---VQARAESAKLILEKIKEF-PKKLPAILTGDFNVDQTSESYQLLDGSGIMRDSYEIAD 219

Query: 238 PKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFS-------------EIL 279
            +   +      +   K    ID+  + +         + +++                 
Sbjct: 220 FRYAPNGTFNGFHPDRKTDSRIDHLFLTKEFEVKKYGFLTDTYRSEAKESARKEQNGNFP 279

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
                 K   +  SDH P+ I  +
Sbjct: 280 KEVSLSKYEARTPSDHFPVMIVVE 303


>gi|118476360|ref|YP_893511.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis str. Al
           Hakam]
 gi|118415585|gb|ABK84004.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis str. Al
           Hakam]
          Length = 378

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 74  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 187

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 188 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N K      N        +KT+  +         
Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVKKINAENNSDSEYASMFKTLHASIPSYTGHTA 302

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 363 NDYSDHYPVEATIS 376


>gi|196037227|ref|ZP_03104538.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus NVH0597-99]
 gi|196031469|gb|EDX70065.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus NVH0597-99]
          Length = 788

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ + +     G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAVEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|217958262|ref|YP_002336808.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH187]
 gi|217066797|gb|ACJ81047.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH187]
          Length = 333

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 103/320 (32%), Gaps = 44/320 (13%)

Query: 17  TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +++ A         +++++ N+  LS      L+ N  +   +D      Y K  + D+V
Sbjct: 23  SSAQADTSTDQNNILKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVV 76

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120
            L E+   +A  ++           T         E         S+      +A+  K 
Sbjct: 77  ILNEVFDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 136

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             V +  Y             N+  V   ++ N + + V+  HL++    DS+    SP+
Sbjct: 137 PIVEKVQYVFANGCGP-DNLSNKGFVYAKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA 192

Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234
            S+ + Q + ++D+I  +   +    +  GD N        N        +KT+  +   
Sbjct: 193 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 251

Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                             N        +DY +  ++       E+      +     +  
Sbjct: 252 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTVTSW 311

Query: 290 KR------LSDHCPISIDYD 303
            +       SDH P++    
Sbjct: 312 LKKYTYDDYSDHYPVAATIS 331


>gi|197120014|ref|YP_002140441.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           bemidjiensis Bem]
 gi|197089374|gb|ACH40645.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           bemidjiensis Bem]
          Length = 249

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 83/282 (29%), Gaps = 44/282 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              ++++N++ L   +  S               + +       DIV LQE+       +
Sbjct: 7   SFTIMTYNVHRLIGNDRHSSAP-----------RIAEVIHTYQPDIVCLQELPGARVRPE 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   + +    L    +            V  +    L Q+   L  ++ +     
Sbjct: 56  -VGGACQNLVHELALLETGGRHFFLERERWGKVVLSRFPMRLVQAG-GLHPQNRYRTVVP 113

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKE 200
           R  + + V++ G+K+ V+++HL                    + Q + L   +W++   +
Sbjct: 114 RGVLWVEVDLFGQKLQVVNVHLGLTP-------------QERNSQVKVLTGPEWLS-HPD 159

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P  + GDFN   +   +       +D  + L               +    +  D+ 
Sbjct: 160 CRPPVALCGDFNTLPSSTIHKQLKNALMDEQEKLKF-----GHNHFTFPSKLPMVRFDHI 214

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +  +            +              SDH P+ +  
Sbjct: 215 FVSPDL----------VVEEELIPRTKLTGAASDHLPLVVRL 246


>gi|325269449|ref|ZP_08136066.1| endonuclease/exonuclease/phosphatase [Prevotella multiformis DSM
           16608]
 gi|324988370|gb|EGC20336.1| endonuclease/exonuclease/phosphatase [Prevotella multiformis DSM
           16608]
          Length = 290

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 79/308 (25%), Gaps = 30/308 (9%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M R  +  L+  ++   +  AQ++ + ++NI   +  +                  L  +
Sbjct: 1   MYR--LTTLILAMLLTCSLSAQRLYVGTYNIRYDNPDDRKEGNA-----WAQRCPQLCDF 53

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                  +   QE+        +     +                +       +     +
Sbjct: 54  INFEQPAVFGTQEVLVTQLRDLLQGLEAYAYIGVGRDDGREEGEYAAIFYRKDLLKLLDS 113

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYS 178
                   P   +   +  A  R       E    GK+ +  + H+              
Sbjct: 114 GNFWLSQTPERPSL-GWDAACIRICTWGKFEDRATGKQFYFFNTHM-----DHVGTVARR 167

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S  L+ Q+   L            P ++ GDFN               I  +       
Sbjct: 168 ESARLILQRIGLLAK--------AQPTILTGDFNVDQTDEIYGIFSRSGILRDCYANARQ 219

Query: 239 KEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +   +    +    ++    ID+  +  +            I  N        + +SDH 
Sbjct: 220 RMAPTGTWNDFMQDSRSNARIDHVFVSSDFDIPHYA-----IFTNSYWTGKSRRNISDHY 274

Query: 297 PISIDYDF 304
           P+ +   F
Sbjct: 275 PVMVKLSF 282


>gi|253756379|ref|YP_003029519.1| surface-anchored DNA nuclease [Streptococcus suis BM407]
 gi|251818843|emb|CAZ56686.1| surface-anchored DNA nuclease [Streptococcus suis BM407]
          Length = 1039

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 84/328 (25%), Gaps = 61/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76
               K+ + S+NI   S          S   + +    + +   +     D++ L E+  
Sbjct: 624 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 675

Query: 77  YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     +     T+  +       N        +I        
Sbjct: 676 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 734

Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           K V +  +                          + + A  R+ +       G+K+ VL 
Sbjct: 735 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 794

Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
            HL S    + L          S       AQ + D+      +      V+ GDFN   
Sbjct: 795 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYE 854

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                       ++         +   S   +     N   +D  ++  N ++    +  
Sbjct: 855 FTKTIE-----ILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLFERYAFDMV 909

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          R SDH P+ +  D
Sbjct: 910 HVNSA----FMEEHGRASDHDPLLVQLD 933


>gi|228944800|ref|ZP_04107163.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228814828|gb|EEM61086.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229120698|ref|ZP_04249941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
 gi|228662703|gb|EEL18300.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229183381|ref|ZP_04310608.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
 gi|228600097|gb|EEK57690.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|225863033|ref|YP_002748411.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           03BB102]
 gi|225790557|gb|ACO30774.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB102]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|196036463|ref|ZP_03103859.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W]
 gi|195990937|gb|EDX54909.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|49479799|ref|YP_035327.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|49331355|gb|AAT62001.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFMFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|228932469|ref|ZP_04095350.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228827159|gb|EEM72912.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|253573925|ref|ZP_04851267.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251846402|gb|EES74408.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 258

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 86/286 (30%), Gaps = 40/286 (13%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++++N+      +G + W             + +  K  DADI+ +QE    + +  + 
Sbjct: 4   KIMTFNLRLNVASDGENAWP-------YRTKAVAEVIKRHDADIIGIQEGLH-DMLTDLE 55

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P      +    R   +    +            K         P      S+S +  R 
Sbjct: 56  PLLPEYAWIGEGREGGNKGEYAAILYKKKNWTVGKAGHFSLSETPEELGARSWSTSHPRM 115

Query: 145 AVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              +  +   G +    + HL         E        L+ ++ +  +       ++ +
Sbjct: 116 CTWVTFKSQTGAEFAAFNTHL-----DHISEEAQQKGMELIRERMKEFR------TQTGL 164

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP------KEKDSRCNANKNLRNKIPI 257
           P V+ GDFN +       +     ++       +       KE  +  +      +  PI
Sbjct: 165 PVVLTGDFNVEPA-----NAVITGLEQEGYRNAYSVLQQEKKEVGATVHHFLGGESGEPI 219

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           DY  +  +                 D     G+  SDH P+  +  
Sbjct: 220 DYIFVSPDL---------QIQNVRVDRELYEGRYPSDHYPVIAEVS 256


>gi|229189268|ref|ZP_04316289.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
 gi|228594168|gb|EEK51966.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTIDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ I V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMNDFEFSKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEQGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|121998516|ref|YP_001003303.1| endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1]
 gi|121589921|gb|ABM62501.1| Endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1]
          Length = 570

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 93/305 (30%), Gaps = 26/305 (8%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                 A  VR+ ++N+       G     + V+       LL    ++L AD++ L EM
Sbjct: 273 ALPPPEAGTVRVAAFNVENYFLTLGERGAASEVELERQRAKLLAAA-ESLHADVLVLVEM 331

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +     + F +          R +       ++ I  ++A R+  V+ + ++       
Sbjct: 332 ENRQDAPEDFVERLAASTGHPWR-LARGGETGSDAIKVSLAYREDRVQPVTETVRDA--- 387

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-CFLDSLENTYSPSCS--LLSQQAQWL 191
                      V    +  G+   V  IH KS     D+ +      C     ++QA+ L
Sbjct: 388 -RRVHHRPPPLVGFRPQGGGEPFAVAGIHFKSKTRCPDAGDVDRGQGCWNHRRTEQAEAL 446

Query: 192 KDWITQKKESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            +++ + +       P +IAGD N                      +             
Sbjct: 447 AEFLGRWRAERSEALPVLIAGDLNAYGGEDPARALAAA----GKVDLLAEHLAWPDRYTY 502

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----------SRGKRLSDHCPI 298
                   +D+        + +       I  +E                  R SDH PI
Sbjct: 503 VFRGESGYLDHLQAHPALAERVAAVHRHPINADEPRFLEFDGDPGRVREDAYRSSDHDPI 562

Query: 299 SIDYD 303
           ++D +
Sbjct: 563 AVDLE 567


>gi|118476676|ref|YP_893827.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str.
           Al Hakam]
 gi|118415901|gb|ABK84320.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str.
           Al Hakam]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           ++     L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LVAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             K ++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N   +   +          +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIAPYTSVDPVHL----NSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|167840494|ref|ZP_02467178.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           thailandensis MSMB43]
          Length = 624

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +     + + +   R    Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGNGFDDPNNRGAKSYEEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         +          R+++    R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGDNWRVVDPGSARLGGDAIAVALIYDSRKVK------PVGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDRNRQPLAQTFRPIGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             + ++    +     +  + 
Sbjct: 468 AAAKVADWLARNPTGAHSEGVLLIGDLNSHTYEDPV-----RALESRGYVNLVSSKIGAG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 582

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 583 DAYRSSDHDPVLIDI 597


>gi|298375120|ref|ZP_06985077.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298267620|gb|EFI09276.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 306

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 81/324 (25%), Gaps = 43/324 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K + + +F         A+ + + ++N+   +  +  +            Y  + Q  
Sbjct: 1   MKKVIYSFIFLFCAVLTLQAETMVVATYNLRNANGGDSTNGNG-----WGQRYPYIAQIV 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    DI   QE               +            +   S     T      K  
Sbjct: 56  QFHGFDIFGTQEGKYPQLQDLRQAMPGYDYIGVGRDDGKQAGEHSAIFYRTD-----KFE 110

Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +    + L    D     +     R                L  +L             
Sbjct: 111 VLEHGDFWLSEITDRPNKGWDAVLPRICTWGEFRDKQTGFTFLFFNLHMDHVG------- 163

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                  ++ A+ +   I +     +P ++ GDFN               I  +   I  
Sbjct: 164 ---VQARAESAKLILKKIKEF-PKRLPAILTGDFNVDQTSESYKLLDGSGIMRDSYEIAD 219

Query: 238 PKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKF---LIQESFS-------------EIL 279
            +   +      +    N   ID+  + +        ++ +++                 
Sbjct: 220 FRYAPNGTFNGFHPDRKNDSRIDHLFLTKEFEVKKYGILTDTYRSEVKESAQKEQNGNFP 279

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
                 K   +  SDH P+ I  +
Sbjct: 280 KEVSLSKYEARTPSDHFPVMIVVE 303


>gi|116695065|ref|YP_840641.1| extracellular nuclease [Ralstonia eutropha H16]
 gi|113529564|emb|CAJ95911.1| extracellular nuclease [Ralstonia eutropha H16]
          Length = 600

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 91/317 (28%), Gaps = 46/317 (14%)

Query: 21  AQKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQ-------YAKNLDADIVFLQ 72
           A  +R+ ++N+    +       +     R   D   L +         + LDAD++ + 
Sbjct: 288 ATTLRVAAFNLQNYFNGDGQGGGFDAPGNRGAQDAAALARQEARLLAALRGLDADVIGVM 347

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLL 131
           E+ +         +          R+++       ++ I   +    +       + P  
Sbjct: 348 EVENDGYGQYSAIRQLATRLGPDWRVLDPGTPALGSNAIAVGLLYNAR------TAVPAG 401

Query: 132 GAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSL 183
               ++    +R+ +         G  + V+  H KS    ++                 
Sbjct: 402 RTATTWLGERSRQPLAGTFRAAAGGTPVTVVVNHFKSKTCTEATGAQADQGDGQGCWNPA 461

Query: 184 LSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
             Q AQ L +W+       +    ++ GD N             + +          +  
Sbjct: 462 RVQAAQALAEWLGTTPTGVAGAGVLVIGDLNSYAMEDPV-----RVLARRGYADMVAEFA 516

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------ 289
                +         +D+ + D  A + ++      I  +E    S              
Sbjct: 517 GKPAYSYVYNGQAGYLDHVLADAAAARHVMAVHAWHINADEPPAFSYAPAPGAPAVPGHY 576

Query: 290 ----KRLSDHCPISIDY 302
                R SDH P+ +D+
Sbjct: 577 APGPYRSSDHDPLVVDF 593


>gi|150008302|ref|YP_001303045.1| hypothetical protein BDI_1671 [Parabacteroides distasonis ATCC
           8503]
 gi|255015456|ref|ZP_05287582.1| hypothetical protein B2_16223 [Bacteroides sp. 2_1_7]
 gi|149936726|gb|ABR43423.1| conserved hypothetical protein with
           endonuclease/exonuclease/phosphatase family domain
           [Parabacteroides distasonis ATCC 8503]
          Length = 306

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 82/324 (25%), Gaps = 43/324 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K + + +F         A+ + + ++N+   +  +  +            Y  + Q  
Sbjct: 1   MKKVIYSFIFLFCAVLTLQAETMVVATYNLRNANGGDSTNGNG-----WGQRYPYIAQIV 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    DI   QE               +            +   S     T      K  
Sbjct: 56  QFHGFDIFGTQEGKYSQLQDLRQAMPGYDYIGVGRDDGKRAGEHSAIFYRTD-----KFE 110

Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +    + L    D     +     R                L  +L             
Sbjct: 111 VLEHGDFWLSEITDRPNKGWDAVLPRICTWGEFRDKQTGFTFLFFNLHMDHVG------- 163

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                  ++ A+ + + I +     +P ++ GDFN               I  +   I  
Sbjct: 164 ---VQARAESAKLILEKIKEF-PKKLPAILTGDFNVDQTSESYQLLDGSGIMRDSYEIAD 219

Query: 238 PKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFS-------------EIL 279
            +   +      +   K    ID+  + +        ++ +++                 
Sbjct: 220 FRYAPNGTFNGFHPDRKTDSRIDHLFLTKEFEVKKYGILTDTYRSEAKESARKEQNGNFP 279

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
                 K   +  SDH P+ I  +
Sbjct: 280 KEVSLSKYEARTPSDHFPVMIVVE 303


>gi|52144632|ref|YP_082195.1| sphingomyelin phosphodiesterase [Bacillus cereus E33L]
 gi|51978101|gb|AAU19651.1| sphingomyelin phosphodiesterase [Bacillus cereus E33L]
          Length = 378

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + DIV L E+ 
Sbjct: 74  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDIVILNEVF 127

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKV 187

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 188 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 363 NDYSDHYPVEATIS 376


>gi|229137476|ref|ZP_04266087.1| Sphingomyelinase C [Bacillus cereus BDRD-ST26]
 gi|228646034|gb|EEL02257.1| Sphingomyelinase C [Bacillus cereus BDRD-ST26]
          Length = 338

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 103/320 (32%), Gaps = 44/320 (13%)

Query: 17  TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +++ A         +++++ N+  LS      L+ N  +   +D      Y K  + D+V
Sbjct: 28  SSAQADTSTDQNNILKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVV 81

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120
            L E+   +A  ++           T         E         S+      +A+  K 
Sbjct: 82  ILNEVFDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 141

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             V +  Y             N+  V   ++ N + + V+  HL++    DS+    SP+
Sbjct: 142 PIVEKVQYVFANGCGP-DNLSNKGFVYAKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA 197

Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234
            S+ + Q + ++D+I  +   +    +  GD N        N        +KT+  +   
Sbjct: 198 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 256

Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                             N        +DY +  ++       E+      +     +  
Sbjct: 257 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTVTSW 316

Query: 290 KR------LSDHCPISIDYD 303
            +       SDH P++    
Sbjct: 317 LKKYTYDDYSDHYPVAATIS 336


>gi|228926225|ref|ZP_04089300.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228833478|gb|EEM79040.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|229056444|ref|ZP_04195857.1| Sphingomyelinase C [Bacillus cereus AH603]
 gi|228720918|gb|EEL72467.1| Sphingomyelinase C [Bacillus cereus AH603]
          Length = 333

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 104/314 (33%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSVNQNNTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKREYPNQTAVLGRSSGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   V+ N + + V+  HL++    DS+    SP+ S+ ++
Sbjct: 143 QY-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVRTK 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q Q ++++I  +   +    +I GD N        N        +KT+  +         
Sbjct: 198 QLQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSNSEYASMFKTLHASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      + +   +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENNVLQPKSPEWSVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|229090130|ref|ZP_04221380.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
 gi|228693207|gb|EEL46918.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TLNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|170688095|ref|ZP_02879307.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0465]
 gi|254682749|ref|ZP_05146610.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|170667990|gb|EDT18741.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0465]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|167635355|ref|ZP_02393669.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0442]
 gi|254740190|ref|ZP_05197882.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Kruger B]
 gi|167529183|gb|EDR91936.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0442]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|49480244|ref|YP_034934.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331800|gb|AAT62446.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 378

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 74  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 128 DNSASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 187

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 188 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 363 NDYSDHYPVEATIS 376


>gi|30261191|ref|NP_843568.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Ames]
 gi|47777892|ref|YP_017700.2| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|30254805|gb|AAP25054.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Ames]
 gi|47551597|gb|AAT30175.2| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. 'Ames Ancestor']
          Length = 583

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 284 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 335

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 336 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 395

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 396 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 455

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 456 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 510

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 511 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 566

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 567 VSDHDPVLAQID 578


>gi|49184024|ref|YP_027276.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Sterne]
 gi|65318458|ref|ZP_00391417.1| COG2374: Predicted extracellular nuclease [Bacillus anthracis str.
           A2012]
 gi|165871845|ref|ZP_02216488.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0488]
 gi|167640270|ref|ZP_02398536.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0193]
 gi|170707621|ref|ZP_02898073.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0389]
 gi|177654201|ref|ZP_02936174.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0174]
 gi|190566721|ref|ZP_03019638.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           Tsiankovskii-I]
 gi|227816075|ref|YP_002816084.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. CDC 684]
 gi|229604339|ref|YP_002865620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0248]
 gi|254725540|ref|ZP_05187322.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A1055]
 gi|254734166|ref|ZP_05191879.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254753529|ref|ZP_05205565.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Vollum]
 gi|254758627|ref|ZP_05210654.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Australia 94]
 gi|49177951|gb|AAT53327.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. Sterne]
 gi|164712422|gb|EDR17956.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0488]
 gi|167511871|gb|EDR87251.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0193]
 gi|170127396|gb|EDS96271.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0389]
 gi|172080908|gb|EDT65988.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0174]
 gi|190562273|gb|EDV16241.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           Tsiankovskii-I]
 gi|227003436|gb|ACP13179.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CDC 684]
 gi|229268747|gb|ACQ50384.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0248]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 88/312 (28%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 TVNDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LATVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             KT++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|319759037|gb|ADV70979.1| DNA nuclease [Streptococcus suis JS14]
          Length = 1039

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 83/328 (25%), Gaps = 61/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76
               K+ + S+NI   S          S   + +    + +   +     D++ L E+  
Sbjct: 624 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 675

Query: 77  YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     +     T+  +       N        +I        
Sbjct: 676 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 734

Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           K V +  +                          + + A  R+ +       G+K+ VL 
Sbjct: 735 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 794

Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
            HL S    + L          S       AQ + D+      +      V+ GDFN   
Sbjct: 795 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYE 854

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                       ++         +   S   +     N   +D  ++  N  +    +  
Sbjct: 855 FTKTIE-----ILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMV 909

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          R SDH P+ +  D
Sbjct: 910 HVNSA----FMEEHGRASDHDPLLVQLD 933


>gi|253752620|ref|YP_003025761.1| surface-anchored DNA nuclease [Streptococcus suis SC84]
 gi|253754446|ref|YP_003027587.1| surface-anchored DNA nuclease [Streptococcus suis P1/7]
 gi|251816909|emb|CAZ52558.1| surface-anchored DNA nuclease [Streptococcus suis SC84]
 gi|251820692|emb|CAR47454.1| surface-anchored DNA nuclease [Streptococcus suis P1/7]
          Length = 1039

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 83/328 (25%), Gaps = 61/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76
               K+ + S+NI   S          S   + +    + +   +     D++ L E+  
Sbjct: 624 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 675

Query: 77  YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     +     T+  +       N        +I        
Sbjct: 676 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 734

Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           K V +  +                          + + A  R+ +       G+K+ VL 
Sbjct: 735 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 794

Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
            HL S    + L          S       AQ + D+      +      V+ GDFN   
Sbjct: 795 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYE 854

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                       ++         +   S   +     N   +D  ++  N  +    +  
Sbjct: 855 FTKTIE-----ILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMV 909

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          R SDH P+ +  D
Sbjct: 910 HVNSA----FMEEHGRASDHDPLLVQLD 933


>gi|146319622|ref|YP_001199334.1| DNA nuclease [Streptococcus suis 05ZYH33]
 gi|146321820|ref|YP_001201531.1| DNA nuclease [Streptococcus suis 98HAH33]
 gi|145690428|gb|ABP90934.1| DNA nuclease [Streptococcus suis 05ZYH33]
 gi|145692626|gb|ABP93131.1| DNA nuclease [Streptococcus suis 98HAH33]
 gi|292559239|gb|ADE32240.1| DNA nuclease [Streptococcus suis GZ1]
          Length = 1059

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 83/328 (25%), Gaps = 61/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76
               K+ + S+NI   S          S   + +    + +   +     D++ L E+  
Sbjct: 644 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 695

Query: 77  YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     +     T+  +       N        +I        
Sbjct: 696 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 754

Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           K V +  +                          + + A  R+ +       G+K+ VL 
Sbjct: 755 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 814

Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
            HL S    + L          S       AQ + D+      +      V+ GDFN   
Sbjct: 815 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYE 874

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                       ++         +   S   +     N   +D  ++  N  +    +  
Sbjct: 875 FTKTIE-----ILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMV 929

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          R SDH P+ +  D
Sbjct: 930 HVNSA----FMEEHGRASDHDPLLVQLD 953


>gi|281425257|ref|ZP_06256170.1| hypothetical protein HMPREF0971_02229 [Prevotella oris F0302]
 gi|281400550|gb|EFB31381.1| putative endonuclease/exonuclease/phosphatase family protein
           [Prevotella oris F0302]
          Length = 299

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 86/305 (28%), Gaps = 29/305 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +++  + ++  L  CT  +AQ + + S+NI   +  + ++   +  +R       L  + 
Sbjct: 17  MKRITVFIIALLFTCTL-MAQPLYVGSYNIRY-NVSDDIAEGNSWKQR----CPHLCDFI 70

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                 I   QE+ +      +   + +            +   +       +     + 
Sbjct: 71  NFEQPVIFGAQEVLADQLHDLLQGLDNYGYIGVGREDGKEAGEYAAIFYKKDLLKLLDSG 130

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                  P   +   +  A  R         + + K  +  + H+               
Sbjct: 131 YFWLSETPEKPST-GWDAACIRICTWGKFQDKASKKTFYFFNTHM-----DHVGAVARRE 184

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           S  L+ Q+ + L              ++ GDFN                  +  +    +
Sbjct: 185 SARLIIQRMKEL--------TGGKYTILTGDFNANQTDESYKMFSESGFLRDCYVNAHQR 236

Query: 240 EKDSRCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                   +          ID+  + ++        +   I  N   +    + +SDH P
Sbjct: 237 MAPVGTWNDYMQDYPGVARIDHIFVTKDF-----DINHYGIFTNSYWLGKTRRNISDHYP 291

Query: 298 ISIDY 302
           + +  
Sbjct: 292 VMVKL 296


>gi|255532422|ref|YP_003092794.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255345406|gb|ACU04732.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 312

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 80/288 (27%), Gaps = 44/288 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P       K++++++NI+             S      D   +    K  D D+V LQE+
Sbjct: 65  PPVQVTGAKIKVMTYNIH--------IGNPPSKPAGIVDLPAIAAVIKAQDPDLVALQEV 116

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                 +         +   T     ++K    +      AV  +   +  + Y L    
Sbjct: 117 DVNTNRSGTSLDEAKELARLTGMNYFYTKAIDYDGGQFGDAVLSRFPILESKRYELPVTA 176

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R    + VE  G++      HL      D+              QA  L   
Sbjct: 177 KLGG--ETRSVALITVEKEGQRFLFASTHLDHLTAEDN-----------RMLQATELVKI 223

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +       +P +IAGDFN             + +                       +  
Sbjct: 224 VKTF---TLPLIIAGDFNATPMSNPL-TILRQELSWGCKSSCPL--------TFSAQKPG 271

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             IDY +M          E F+ + Y            SDH P+  + 
Sbjct: 272 STIDYVMMRP-------AEKFNVLSYVT----VNESYASDHLPLVTEI 308


>gi|196044355|ref|ZP_03111591.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           03BB108]
 gi|196024994|gb|EDX63665.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           03BB108]
          Length = 788

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 86/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPHNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         ++      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAAVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ + +++   QKK +  P V+ GD N             K ++  
Sbjct: 661 QPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +                 +  N   +D+ ++  N   +   +          +I     R
Sbjct: 716 NLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIAPYTSVDPVHL----NSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+    D
Sbjct: 772 VSDHDPVLAQID 783


>gi|212694164|ref|ZP_03302292.1| hypothetical protein BACDOR_03690 [Bacteroides dorei DSM 17855]
 gi|237727703|ref|ZP_04558184.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D4]
 gi|265751009|ref|ZP_06087072.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212663384|gb|EEB23958.1| hypothetical protein BACDOR_03690 [Bacteroides dorei DSM 17855]
 gi|229434559|gb|EEO44636.1| endonuclease/exonuclease/phosphatase family [Bacteroides dorei
           5_1_36/D4]
 gi|263237905|gb|EEZ23355.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 336

 Score =  111 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/341 (10%), Positives = 97/341 (28%), Gaps = 47/341 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50
           ++K +L L    +       +  R++ +N+  L + +  +L  +           +  R 
Sbjct: 1   MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +           D+V L E+ + + +  +   +          + +      
Sbjct: 61  HDKLARIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSPDE-- 118

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165
              I  A+  ++   +++ ++   +  K+   R   R  + +  ++ +G  + V   H+ 
Sbjct: 119 -RGIDVALLYQRGTFKLVGKNCISVPYKEI-ERRPTRDILHVTGQVASGDTLDVFVCHMP 176

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
           S    +     Y     L + Q   +              +I GDFN             
Sbjct: 177 SRAGGEEKSEPYR----LFTAQILKIAADSVMNIRQHPNVMIMGDFNDYPTNNSIAKVLG 232

Query: 226 KTI--DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-------QNAYKFLIQESFS 276
                    +   +      +    +       +D  ++         +      +    
Sbjct: 233 AVAPKSGVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSGFLLQGHDSMRTSYDKAQIL 292

Query: 277 EILY--------------NEDDIKSRGKRLSDHCPISIDYD 303
           +  +                   K      SDH P+ +D++
Sbjct: 293 KYPFLLEEDEKYGGNIPSRTYWGKKYHGGYSDHLPVCVDFE 333


>gi|206977785|ref|ZP_03238675.1| sphingomyelin phosphodiesterase C [Bacillus cereus H3081.97]
 gi|206743982|gb|EDZ55399.1| sphingomyelin phosphodiesterase C [Bacillus cereus H3081.97]
          Length = 333

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 198 QLKEIQDFIENKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKILQPKSPQWTVTSWLKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P++    
Sbjct: 318 DDYSDHYPVAATIS 331


>gi|196042087|ref|ZP_03109372.1| sphingomyelin phosphodiesterase C [Bacillus cereus NVH0597-99]
 gi|196027112|gb|EDX65734.1| sphingomyelin phosphodiesterase C [Bacillus cereus NVH0597-99]
          Length = 333

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 97/310 (31%), Gaps = 37/310 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+   +A
Sbjct: 33  QNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVFDNSA 86

Query: 80  VAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
             ++           T         E         S       +A+  K   V +  Y  
Sbjct: 87  SDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKVQYVF 146

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + Q + 
Sbjct: 147 ANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKE 201

Query: 191 LKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           ++D+I  +   +    +  GD N        N        +KT+  +             
Sbjct: 202 IQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDA 261

Query: 245 C-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LS 293
                   N        +DY +  ++       E+      +     +   +       S
Sbjct: 262 TTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTYNDYS 321

Query: 294 DHCPISIDYD 303
           DH P+     
Sbjct: 322 DHYPVEATIS 331


>gi|229010475|ref|ZP_04167677.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
 gi|228750673|gb|EEM00497.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
          Length = 788

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 540

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 541 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 600

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +      L         +S      R+ +       G+ + V+  HL S     +     
Sbjct: 601 LAAVPKLLDKNVVRIGDESSLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFGKV 660

Query: 178 S----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 S     Q AQ +  ++   QKK +  P V+ GD N             K ++  
Sbjct: 661 QPLVLKSEEKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGT 715

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +  N   +D+ ++  N        +  + ++   +I     R
Sbjct: 716 ILKNMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PYTIVDPVHLNSNIMKEHGR 771

Query: 292 LSDHCPISIDYD 303
           +SDH P+ +  D
Sbjct: 772 VSDHDPVLVQID 783


>gi|223933529|ref|ZP_03625511.1| LPXTG-motif cell wall anchor domain protein [Streptococcus suis
           89/1591]
 gi|223897789|gb|EEF64168.1| LPXTG-motif cell wall anchor domain protein [Streptococcus suis
           89/1591]
          Length = 651

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 82/328 (25%), Gaps = 61/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76
               K+ + S+NI   S          S   + +    + +   +     DI+ L E+  
Sbjct: 236 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDIIGLIEVQD 287

Query: 77  YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     +     T+  +       N        +I        
Sbjct: 288 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 346

Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           K V +  +                          + + A  R+ +       G+K+ VL 
Sbjct: 347 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 406

Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
            HL S    + L          S       AQ + D+      +      V+ GDFN   
Sbjct: 407 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQIIADFTKAGLAQNPNANIVMLGDFNDYE 466

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                       ++         +   S   +     N   +D  ++  N       +  
Sbjct: 467 FTKTIE-----ILETGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLDRYAFDMV 521

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          R SDH P+ +  D
Sbjct: 522 HVNSA----FMEEHGRASDHDPLLVQLD 545


>gi|84387306|ref|ZP_00990326.1| putative phospholipase C precursor [Vibrio splendidus 12B01]
 gi|84377755|gb|EAP94618.1| putative phospholipase C precursor [Vibrio splendidus 12B01]
          Length = 444

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 91/296 (30%), Gaps = 36/296 (12%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
               A  ++++++NI  L                   Y L+ +Y K    D++ LQE+ +
Sbjct: 174 PEPDANTLKVMTYNIWALPAIASHIGD---------RYDLIPKYVKGY--DVLALQEVFA 222

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 +        + +     +         I   I  R   V   Q  +P     D 
Sbjct: 223 NGRDEFLRELAKEYPYQTKMLDKDGINIYDGGVI---IVSRYPIVNEAQYVFPDCTGTDC 279

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F+           V  NG+   V   H  SF    + +           +Q + L   + 
Sbjct: 280 FADK---GVNYAEVIKNGQAYHVFGTHTASFDTNTARDYRQRQ-----FKQMRQLAQSLE 331

Query: 197 QKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251
               +    + +GDFN   + + G+    +  +  ++    +     S  +   N     
Sbjct: 332 --IPTSETVIYSGDFNVNKLKFPGDYQQMFANLQADEPE--YSGYTASTFDPRINNFAGE 387

Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 N   +DY V+     +     +  ++  +      +   LSDH P+S   
Sbjct: 388 PMSGGENVEYLDYVVVSSEYAQKTHNNNRVDVPRSTSSELWKHYNLSDHFPVSAVI 443


>gi|49183669|ref|YP_026921.1| sphingomyelinase C [Bacillus anthracis str. Sterne]
 gi|49177596|gb|AAT52972.1| sphingomyelinase C [Bacillus anthracis str. Sterne]
          Length = 378

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 74  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 187

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 188 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 363 NDYSDHYPVEATIS 376


>gi|325287411|ref|YP_004263201.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
 gi|324322865|gb|ADY30330.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
          Length = 279

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 84/307 (27%), Gaps = 38/307 (12%)

Query: 1   MIRKYVLALVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           M ++ ++ LV      T  ++ Q V+ +++NI   +  + ++ W             +  
Sbjct: 1   MNKRIIIVLVLIFSFTTTKALCQSVKAMTYNIKYDNTSDTINNWNFRK-------AKMAA 53

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             ++     + +QE               +                S      AI   K 
Sbjct: 54  LIQHYSPSFLGIQEGLHNQVSYLDSNLPNYNYIGVGRDDGKQKGEYS------AIYYNKN 107

Query: 120 NVRVLQQSYPLLGAKD-----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           N +V++ +   L          +  A  R     L +    K +    +           
Sbjct: 108 NFKVIKSNTFWLSTTPNKISVGWDAAMERICTYGLFQHKKTKQYYWVFNAHF-------- 159

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                        A+ + + I        P ++ GDFN                D   + 
Sbjct: 160 --DHIGVEARKNSAKLIVEKIKNLNTKNYPVILMGDFNVTPTTEAITTITNYIPDSYTNS 217

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +  P       N   N      IDY    +N     ++          DD     K +SD
Sbjct: 218 LTTPYGPKGTFNGFTNRILDHRIDYVFA-KNLNVLSVKV--------IDDRLDNNKHISD 268

Query: 295 HCPISID 301
           H P+   
Sbjct: 269 HLPVLAT 275


>gi|167743665|ref|ZP_02416439.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 14]
 gi|167899281|ref|ZP_02486682.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 7894]
 gi|167915957|ref|ZP_02503048.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 112]
 gi|167923801|ref|ZP_02510892.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei BCC215]
 gi|237509278|ref|ZP_04521993.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei MSHR346]
 gi|254184827|ref|ZP_04891416.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1655]
 gi|184215419|gb|EDU12400.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1655]
 gi|235001483|gb|EEP50907.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei MSHR346]
          Length = 624

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  + 
Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKTGAG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 583 DAYRSSDHDPVLIDI 597


>gi|190572318|ref|YP_001970163.1| hypothetical protein Smlt0242 [Stenotrophomonas maltophilia K279a]
 gi|190010240|emb|CAQ43848.1| unnamed protein product [Stenotrophomonas maltophilia K279a]
          Length = 570

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 94/317 (29%), Gaps = 36/317 (11%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQYAKNLDADI 68
           P   +V   + + ++N+      +G      ++      +   +    L      L AD+
Sbjct: 261 PAVPTVPGNLHVAAFNLENFFNGDGQGGGFPTLRGARTLEEHKAQVAKLVTTVNALGADV 320

Query: 69  VFLQEMGS-----YNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVR 122
             L E+ +      +A+A++              R ++      +N I   I  R   ++
Sbjct: 321 AALMELENDGYGPQSAIAELVDALNRDRGAQGDWRFVDAGNGPGDNPIRVGIIYRSARLQ 380

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLD------SLEN 175
            + +   L G         +R  +    +   G    V+  H KS    D         +
Sbjct: 381 PVGKPATLTGGPFVEH---SRVPLAQAFQGKQGAPFVVVANHFKSKGCRDAAGADADHND 437

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 +     AQ L  W+            V+ GDFN             +T+     
Sbjct: 438 NQGCWNATRVTSAQQLHAWLQTDPTGTGAKDAVLLGDFNAYAMEDPI-----RTLHDLGW 492

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---- 289
              F   K     +         +D+ ++     K L   +      +E D         
Sbjct: 493 QDAFKVAKVEHPYSYVYNGYTGRLDHALLSPGMAKRLRGAAEWHSNADEQDASGYQGRNV 552

Query: 290 ---KRLSDHCPISIDYD 303
               R SDH P+ + +D
Sbjct: 553 QGPWRSSDHDPLLLGFD 569


>gi|229016006|ref|ZP_04172963.1| Sphingomyelinase C [Bacillus cereus AH1273]
 gi|229022224|ref|ZP_04178770.1| Sphingomyelinase C [Bacillus cereus AH1272]
 gi|228739078|gb|EEL89528.1| Sphingomyelinase C [Bacillus cereus AH1272]
 gi|228745285|gb|EEL95330.1| Sphingomyelinase C [Bacillus cereus AH1273]
          Length = 333

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 103/313 (32%), Gaps = 37/313 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+  
Sbjct: 30  STNQNDTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVFD 83

Query: 77  YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            +A  ++           T         E         S+      +A+  K   V +  
Sbjct: 84  NSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQ 143

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y +           N+  V   V+ N + + V+  HL++    DS+    SP+ S+ ++Q
Sbjct: 144 Y-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVRTKQ 198

Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            Q ++++I  +   +    +I GD N        N        +KT+  +          
Sbjct: 199 LQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTAT 258

Query: 242 DSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR----- 291
                      N        +DY +  ++       E+      +     +   +     
Sbjct: 259 WDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSHIENKVLQPKSPQWTVTSWFKKYTYD 318

Query: 292 -LSDHCPISIDYD 303
             SDH P+     
Sbjct: 319 DYSDHYPVESTIS 331


>gi|167765272|ref|ZP_02437385.1| hypothetical protein BACSTE_03660 [Bacteroides stercoris ATCC
           43183]
 gi|167696900|gb|EDS13479.1| hypothetical protein BACSTE_03660 [Bacteroides stercoris ATCC
           43183]
          Length = 287

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/316 (15%), Positives = 94/316 (29%), Gaps = 42/316 (13%)

Query: 1   MIRKYVLALVFFLVPCTA-----SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M +  +L L F +V C       S   +V ++S+NI   + ++G++ W+    R      
Sbjct: 1   MKKIILLFLSFGVVSCGQVKQQVSEQARVNVMSYNIRYDNPEDGMNNWQYRKDRA----- 55

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
                 +  D DI+  QE+              + +              S      A  
Sbjct: 56  --ATAIRFYDVDILGTQEVLHNQLEDLKQRLPEYGVIGVGREDGKVKGEYSALWYKKARF 113

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173
               +        P +     +  A  R A    +  +I+GK+ + L+ HL         
Sbjct: 114 ELLASGYFWLSETPEIAGSRGWDGACERIASWGKLKDKISGKEYFALNTHL-----DHIG 168

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTID 229
                   SL+  +   L D         +P ++ GDFN +               K + 
Sbjct: 169 VVARREGVSLILDRVNELSD--------GLPVIVTGDFNAEPESDVIKHMTDAENPKHLQ 220

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
               +           +    +       IDY  +  +            + Y       
Sbjct: 221 DTRLMSPIVYGPSWSFHDFGKIPYDKRPLIDYVFVRNDL---------KVLRYGVLAETE 271

Query: 288 RGKRLSDHCPISIDYD 303
             + LSDH P+ +  +
Sbjct: 272 GSEFLSDHAPVLVTVE 287


>gi|229095326|ref|ZP_04226318.1| Sphingomyelinase C [Bacillus cereus Rock3-29]
 gi|229114275|ref|ZP_04243696.1| Sphingomyelinase C [Bacillus cereus Rock1-3]
 gi|228669295|gb|EEL24716.1| Sphingomyelinase C [Bacillus cereus Rock1-3]
 gi|228688185|gb|EEL42071.1| Sphingomyelinase C [Bacillus cereus Rock3-29]
          Length = 333

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TPTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAAGYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKREYPNQTAVLGRSSGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N   + V+  HL++    DS+    SP+ S+ ++
Sbjct: 143 QY-VFEKGCGPDNLSNKGFVYTKIKRNDSFVHVIGTHLQA---EDSMCGKTSPA-SVRTK 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q Q ++++I  +   +    +I GD N        N        +KT+  +         
Sbjct: 198 QLQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSHIENKVLQPKSPQWTVTSWFKKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 318 NDYSDHYPVEATIS 331


>gi|166710547|ref|ZP_02241754.1| hypothetical protein Xoryp_03535 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 288

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 91/299 (30%), Gaps = 29/299 (9%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +LAL   L    AS    +R++S+N+        V +  +  KR T   T +    K   
Sbjct: 17  ILALCITLPAFAASAPAPLRVMSFNVR-------VPVDSDGDKRWTVRRTSMVALIKQTH 69

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D+   QE+    A         +  F    R     +         A++V +     L 
Sbjct: 70  PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSVIESGDFWL- 128

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
              P +    S++    R     L E          ++                +  +LS
Sbjct: 129 SETPEVPGSSSWNTDLPRMVTWALFERRNDTRRFYLLNTHLPHRDQDEAAREHGARVILS 188

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           + A            + +P V+ GDFN   +           +  +        +   + 
Sbjct: 189 RIAT---------LPADIPVVVTGDFNSDPDQGTYR--TLTAVLGDARAHVAKPQGPEKT 237

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +   +    ID+ +              +   ++  D +  G   SDH P+  ++++
Sbjct: 238 FQDFTTQPTRRIDWILFRG----------LTPTRFSTLDARPGGILPSDHYPVLAEFEW 286


>gi|153005530|ref|YP_001379855.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
 gi|152029103|gb|ABS26871.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
          Length = 260

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 86/281 (30%), Gaps = 47/281 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++SWN+++L   +G             D   + +   +L  DI  LQE+G   A    
Sbjct: 1   MRILSWNVHSLRGTDG-----------RRDPERIARVIADLRPDIAGLQEVGGELAADG- 48

Query: 84  FPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            P++      S   + +      S         +  ++     ++Y L     S      
Sbjct: 49  -PRDVAEALASLTGMRSTFGPTMSFRGHPYGNGILTRHPIEATRTYDL-----SVRGREP 102

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +   VE+ G ++     HL                     Q AQ L   I +     
Sbjct: 103 RGCLRADVEVGGVRVHFFSAHLGLHWR------------ERRKQAAQLLSADILRDTALA 150

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+ GDFN   N         + +              +      +    + +D   +
Sbjct: 151 HPLVLVGDFNSLSNRSAVPRWLRRQLVDCA------HAARNEAPTFPSRFPLLRLDRVFV 204

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D      ++                  +R SDH P+ +D +
Sbjct: 205 DSAF--RVVGCEVVHTPL--------ARRASDHLPLVVDLE 235


>gi|152986656|ref|YP_001346586.1| PKD domain-containing protein [Pseudomonas aeruginosa PA7]
 gi|150961814|gb|ABR83839.1| PKD domain containing protein [Pseudomonas aeruginosa PA7]
          Length = 780

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/329 (14%), Positives = 93/329 (28%), Gaps = 45/329 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQYAKNLDADI 68
           P    V  ++R+ S+N+      +G      +       +        +        ADI
Sbjct: 446 PAQPVVEGRLRVASFNVLNYFNGDGKGGGFPTSRGASTAEEFQRQKAKIVAAILASKADI 505

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-------IHTAIAVRKKNV 121
           V L E+ +          +      +           + N        I   +  R   V
Sbjct: 506 VGLMEIENDGYGEFAAIADLVDGLNAGLPQGQRYAFVNPNRTKLGSDEIAVGLIYRSDRV 565

Query: 122 RVL-QQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175
           R     +         F  + NR  +    +    G+++ +   HLKS    C  D    
Sbjct: 566 RTYGAAAVLDRTVNPEFDDSKNRPTLAQTFQEITGGERLTIAVNHLKSKGSACDGDPDTG 625

Query: 176 TYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
               +C+   ++ AQ L DW+           ++I GD N        N      I    
Sbjct: 626 DGQGNCNLTRARAAQALVDWLASDPTAAKDPDYLIIGDLNSYAKEDPVN-----VIRAAG 680

Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
                 ++  +    +         +D+ + + +  + +       I  +E  +      
Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNLE 740

Query: 290 ---------------KRLSDHCPISIDYD 303
                           R SDH P+ I  D
Sbjct: 741 FKTPRQQDSLYSAEPYRASDHDPVVIGID 769


>gi|225023438|ref|ZP_03712630.1| hypothetical protein EIKCOROL_00296 [Eikenella corrodens ATCC
           23834]
 gi|224943787|gb|EEG24996.1| hypothetical protein EIKCOROL_00296 [Eikenella corrodens ATCC
           23834]
          Length = 255

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 86/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  +      D++ LQE          
Sbjct: 1   MKIATWNVNSL----------------KVRLPHVSDWLIQHQPDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      S   ++ +    S    +  +A+  K       +        +      R
Sbjct: 35  LKLDQDQFPLSAFEMLGYRAVWSGQKTYNGVAILSKEEVQNVHT-----GLPALPNDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V+D++  +   + S +  Y        Q    L ++I  +     
Sbjct: 90  RVIAATI----GGVRVVDVYCVNGEAVGSEKFAYKQ------QWFAALAEFIRSELAQYP 139

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN     L   D                +++T+          +   +     
Sbjct: 140 ELVLLGDFNIAPADLDVYDPEKWQGKILCSAEERAWFQTLLDLGLTDSLRRLHPAEP-LY 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ +  Q     L            D      +R SDH P+ 
Sbjct: 199 TWWDYRMNMFRRKLGLRIDHILASQALLPRLAAAGV-------DTAPRALERPSDHAPVW 251

Query: 300 IDYD 303
            +++
Sbjct: 252 AEFE 255


>gi|197105800|ref|YP_002131177.1| hypothetical protein PHZ_c2338 [Phenylobacterium zucineum HLK1]
 gi|196479220|gb|ACG78748.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 243

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 87/281 (30%), Gaps = 44/281 (15%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+V++N++     +              D + +      L+ DIV LQE+          
Sbjct: 3   RIVTYNVHRCVGNDR-----------RLDVSRIAAVLAALNPDIVALQELDVGRRRTNYA 51

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +              H+      +     A+       L +  PL G  D       R 
Sbjct: 52  DQAHEIAEQLEMACHFHAALQV-EEERYGDAILTAYPERLVKVGPLPGY-DRMRALEPRG 109

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKKESL 202
           A+ + VEI GK + +++ HL                      QA  L    W+    +  
Sbjct: 110 ALWVEVEIGGKPVQIINTHLGLIP-------------REQQIQAAHLAGTTWLD-HPDCR 155

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P ++ GDFN            ++T+       R    + +  +   +    + ID+  +
Sbjct: 156 WPAILLGDFNATATS-----VVYRTLTARLKAARRLTRRRTATSTFPSPLPVLRIDHVFV 210

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   +   F  +              SDH P+ +D+D
Sbjct: 211 SPGIEVHDVFAPFDPLTRV----------ASDHLPLVMDFD 241


>gi|89095707|ref|ZP_01168601.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus sp.
            NRRL B-14911]
 gi|89089453|gb|EAR68560.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus sp.
            NRRL B-14911]
          Length = 1532

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/330 (12%), Positives = 84/330 (25%), Gaps = 63/330 (19%)

Query: 14   VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFL 71
                     K+ + S+N+   S              +      L +         DI+ L
Sbjct: 771  TTSLTKEEDKLTIASYNVENFS-----------PAVSADKIERLARAVVENLKRPDIIGL 819

Query: 72   QEMGSYN-----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             E+   N                 A            +     + N        +I    
Sbjct: 820  TEVQDNNGETNDGTTDATESFNVLAAKIKELGGPQYSYTDIAPVNNQDGGAPGGNIRVGF 879

Query: 115  AVRKKNVRVLQQS------------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                + V + + +                   P      + +   +R+ +    E  G+ 
Sbjct: 880  LYNAERVSLTEGAPKGTSTQSVGFENGKLTLNPGRIDPTNEAYKSSRKPLAAQFEFKGES 939

Query: 157  IWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGD 210
            + V+  H  S      L     P    S     + A  +  ++     ++     V+ GD
Sbjct: 940  VIVVANHFNSKGGDQPLFGKVQPPVLGSEVQRMKIANIVNGFVKDVKAEDPNANIVLLGD 999

Query: 211  FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
            FN             K +   +      +       +     N   +D+ ++  N     
Sbjct: 1000 FNDFEFSNP-----LKALKGQELTNMIEQVPAEERYSYSYQGNAQVLDHILVSNNLA--- 1051

Query: 271  IQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +  +I++          R SDH P+ I
Sbjct: 1052 -AATAVDIVHINSGFMEEHGRASDHDPVLI 1080


>gi|253702348|ref|YP_003023537.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
 gi|251777198|gb|ACT19779.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
          Length = 249

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 86/282 (30%), Gaps = 44/282 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              ++++N++ L   +  S               + +      ADIV LQE+       +
Sbjct: 7   SFTIMTYNVHRLIGNDRHSSAP-----------RIAEVIHTYQADIVCLQELPGARVRPE 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   + +    L +  +            V  +    L Q+   L  ++ +     
Sbjct: 56  -VGGACQNLMHELALLESGGRHFFLERERWGKVVLSRFPMRLVQAG-GLHPQNRYRTVVP 113

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKE 200
           R  + + +++ G+K+ V+++HL                    + Q + L   +W++   +
Sbjct: 114 RGVLWVEIDLFGQKLQVVNVHLGLTP-------------QERNYQVRVLTGPEWLS-HPD 159

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P  + GDFN   +   +       +D  + L               +    +  D+ 
Sbjct: 160 CRPPVALCGDFNTLPSSTIHKQLKNALMDEQEKLKF-----GHNQFTFPSKLPMVRFDHI 214

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +  +                    K  G   SDH P+ +  
Sbjct: 215 FVSPDL---------VVENELIPRTKLTG-AASDHLPLVVRL 246


>gi|42779823|ref|NP_977070.1| sphingomyelinase C [Bacillus cereus ATCC 10987]
 gi|42735740|gb|AAS39678.1| sphingomyelinase C [Bacillus cereus ATCC 10987]
          Length = 378

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 74  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 127

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 187

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 188 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362

Query: 292 --LSDHCPISIDYD 303
              SDH P++    
Sbjct: 363 DDYSDHYPVAATIS 376


>gi|47568807|ref|ZP_00239501.1| phospholipase c precursor [Bacillus cereus G9241]
 gi|47554483|gb|EAL12840.1| phospholipase c precursor [Bacillus cereus G9241]
          Length = 378

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 74  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 128 DNSASDRLLGNLKQEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 187

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N   + V+  HL++    DS+    SP+ S+ + 
Sbjct: 188 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +  GD N        N        +KT+  +         
Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY V  ++       E+      +     +   +    
Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIVASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTY 362

Query: 292 --LSDHCPISIDYD 303
              SDH P+     
Sbjct: 363 NDYSDHYPVEATIS 376


>gi|330833582|ref|YP_004402407.1| DNA nuclease [Streptococcus suis ST3]
 gi|329307805|gb|AEB82221.1| DNA nuclease [Streptococcus suis ST3]
          Length = 1039

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 83/328 (25%), Gaps = 61/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76
               K+ + S+NI   S         +S   + +    + +   +     D++ L E+  
Sbjct: 624 PNDDKLTIASYNIENFSA--------DSKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 675

Query: 77  YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     +     T+  +       N        +I        
Sbjct: 676 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 734

Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           K V +  +                          + + A  R+ +       G+K+ VL 
Sbjct: 735 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 794

Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            HL S    + L          S       AQ + D+      +      V+ GDFN   
Sbjct: 795 NHLNSKRGDNGLYGKIQPVSFKSEEKRHSLAQIITDFTKAGLTQNPNANIVMLGDFNDYE 854

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                       ++         +   S   +     N   +D  ++  N       +  
Sbjct: 855 FTKTIE-----ILETGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLDRYAFDMV 909

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          R SDH P+ +  D
Sbjct: 910 HVNSA----FMEEHGRASDHDPLLVQLD 933


>gi|319792482|ref|YP_004154122.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS]
 gi|315594945|gb|ADU36011.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS]
          Length = 261

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 89/303 (29%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                +    +  +      D++ LQE+   +     
Sbjct: 1   MKIATWNVNSLT----------------ARLQHVLDWLIANPVDVLCLQELKMTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +   +         +  +A+                    F+   +R
Sbjct: 41  ------KFPLEVLKSAGYEAAVFGQKTYNGVAILSLAPMRDVVKNI-----GGFTDEQSR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   VE     + V++ +  +     S +  Y        +    L+DW+ Q+  +  
Sbjct: 90  -VIAATVETPTGPLRVVNGYFVNGQAPGSDKFEYK------LKWLDALRDWLRQELVAHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN       + D                 +K +     L    +  +    + 
Sbjct: 143 NLVLLGDFNITPEDRDSFDPVGLKETIHHTTEEREHFKALLGLG-LTDSFRMFEQPEKSY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++ +     +            D +  + ++ SDH P+ 
Sbjct: 202 SWWDYRMLGYQKNRGLRIDHILVSETLLPRVKGCII-------DRVPRKWEKPSDHAPVV 254

Query: 300 IDY 302
           +D 
Sbjct: 255 LDL 257


>gi|158335038|ref|YP_001516210.1| 5'-nucleotidase/2',3'-cyclic phosphodiesterase [Acaryochloris marina
            MBIC11017]
 gi|158305279|gb|ABW26896.1| 5'-nucleotidase/2',3'-cyclic phosphodiesterase, putative
            [Acaryochloris marina MBIC11017]
          Length = 2593

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 84/313 (26%), Gaps = 38/313 (12%)

Query: 23   KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77
            ++ + S+N+  L   +G      +  +       +    +    DI+ LQE+        
Sbjct: 1392 QLTVASYNVLNLDPNDGDGSTDVANGQFDRLAAQIVNNLQA--PDIIALQEIQDNSGSVD 1449

Query: 78   -------NAVAKVFP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
                     +  +             F + +            +I  A       V +  
Sbjct: 1450 DGTTAADQTLQMLVDAIAAAGGPTYEFRTIDPEDGAFGGQPGGNIRNAFLYNPDRVSIDD 1509

Query: 126  QSYPLLGAK--------DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
             S  LL  +        +  +  G+R  +    E NG+ + V++ H  S      +    
Sbjct: 1510 SSLQLLTPEVLAAAGASNPDAFEGSRTPLAANFEFNGQTVQVINNHFSSRFGSSPIFGAT 1569

Query: 178  SPSCS----LLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPN 231
             P           QAQ + D++  +         ++AGD N         +      D  
Sbjct: 1570 QPFIQAGEDAREAQAQAVNDFVDAQLADNPDANIIVAGDLNTFDTTNDLLEILPGVGDEQ 1629

Query: 232  DSLIRFPKE-KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD----IK 286
                  P+  +           N   +D+             +          D    I 
Sbjct: 1630 VLTSLVPQAVETDDAYTFIFDGNAQVLDHQFATNALAAGAEFDIVHVNNDFVRDDGQAIF 1689

Query: 287  SRGKRLSDHCPIS 299
                  SDH PI 
Sbjct: 1690 DDSIVASDHEPIV 1702


>gi|108761648|ref|YP_634768.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108465528|gb|ABF90713.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 287

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 91/319 (28%), Gaps = 69/319 (21%)

Query: 1   MIRKYVLALVFFLVPCTAS-----------------VAQKVRLVSWNINTLSEQEGVSLW 43
           M  + +L ++F + P   +                    ++R++++NI + +        
Sbjct: 1   MSLRRLLPILFLMGPLACATGPGYLASTESVAAVRRAPGELRVMTFNIQSGA-------- 52

Query: 44  KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
                        +    +    D+V LQE+ + +  A+   +       +  +   H +
Sbjct: 53  --------RGLERVAHVIRAAVPDVVALQEVDAKSTRARGLDQTEELSRLTGLKYRAHFR 104

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                     IAV  +        YPL G +     A  R     +V+++G+++ V   H
Sbjct: 105 TTDLFGGAYGIAVLSRFPLEALAQYPLPGPRG----AEPRTVAHAVVDVDGREVSVYLTH 160

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
           L    F        S   + L  Q                P V+ GD N   +       
Sbjct: 161 LVRRPFNSDTRVRQSAYVARLMAQ-------------DSRPKVLMGDLNDGPDSRST--- 204

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
             + +      +                   + IDY +       F+             
Sbjct: 205 --RLLRRALHDVAAATGGTGGTYPLPLFLPTLRIDYVLACDAFT-FVASRVLRVD----- 256

Query: 284 DIKSRGKRLSDHCPISIDY 302
                   +SDH P+  D 
Sbjct: 257 --------VSDHYPVVADL 267


>gi|23097914|ref|NP_691380.1| hypothetical protein OB0459 [Oceanobacillus iheyensis HTE831]
 gi|22776138|dbj|BAC12415.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 402

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 99/329 (30%), Gaps = 63/329 (19%)

Query: 1   MIRKYVLALVFFLVPCTA-----SVAQK-------VRLVSWNINTLSEQEGVSLWKNSVK 48
           M + YV+ L   L+   A     + A+        + ++S+N+   +  +         +
Sbjct: 1   MKKTYVILLGLILMGSVAFGTISANAETTQEGDANLEVMSYNLRYDNPND--------PQ 52

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                  +L++Y    D DI+  QE               +         I   +   +N
Sbjct: 53  TWEERLPVLQEYLLEKDPDIIGTQEALYNQVNDVDANLPGYD-------WIGLGREGGSN 105

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKD------SFSRAGNRRAVELLVEIN--GKKIWVL 160
               AI  ++     L+  +  L          S+  +  R       E     K+ + +
Sbjct: 106 GEFMAIYYKEDRFTPLEYDHYWLSDTPKEIGSTSWGNSIPRMVTWAKFEDKETNKQFYFV 165

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
           + H                S +   + A+ + + +    +  +P V+ GDFN  +    +
Sbjct: 166 NTHFDH------------ESENARVKSAELIAERLNDF-DEDIPVVLTGDFNTPLESESH 212

Query: 221 NDDFWKTIDPNDSLIRFPK-----EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                  +  +       K        +  N          ID+ +           +  
Sbjct: 213 QILTADDLFEDPWETAEEKINEDLGTFNGFNDATGGGADNKIDWVL----------TKGI 262

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  D+ ++ G   SDH P+  + ++
Sbjct: 263 DTKSVEIDNYQNNGYFPSDHYPVITELNY 291


>gi|229114626|ref|ZP_04244040.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
 gi|228668691|gb|EEL24119.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
          Length = 786

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 91/313 (29%), Gaps = 49/313 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 487 DKLTVATYNIENFSAN--------KKETTDEKVKELAYSIKYNLKMPDIIGVEEMQDNNG 538

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKN-- 120
                           +  V         +       N        +I            
Sbjct: 539 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPSNNQDGGAPGANIRVGFFYNPSRVK 598

Query: 121 ----VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                ++L ++   +G +++   +  R+ +       G+ + V+  HL S     +    
Sbjct: 599 LATVPKLLDKNVVRIGDENALFDS-TRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGK 657

Query: 177 YS----PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                  S     Q AQ +  ++   QKK +  P V+ GD N             K ++ 
Sbjct: 658 VQPLVLKSEEKRIQLAQEVNYFVQGIQKKNANAPVVVLGDMNDFEFSKP-----LKALEG 712

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                              +  N   +D+ ++  N        +  + ++   +I     
Sbjct: 713 TILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTVVDPVHLNSNIMKEHG 768

Query: 291 RLSDHCPISIDYD 303
           R+SDH P+    D
Sbjct: 769 RVSDHDPVLAQID 781


>gi|254521169|ref|ZP_05133224.1| nuclease [Stenotrophomonas sp. SKA14]
 gi|219718760|gb|EED37285.1| nuclease [Stenotrophomonas sp. SKA14]
          Length = 481

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 98/326 (30%), Gaps = 36/326 (11%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEG--VSLWKNSVKRT----TSDYTLLRQ 59
           VL L     P   +V   + + ++N+      +G           RT     +  T L  
Sbjct: 163 VLKLPELKRPAVPTVPGSLHVAAFNLENFFNGDGQGGGFPTLRGARTLDEHKAQVTKLVT 222

Query: 60  YAKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTA 113
               L AD+  L E+ +      +A+A++              R ++      +N I   
Sbjct: 223 TVNALGADVAALMELENDGYGPQSAIAELVDALNRDRGAQGDWRFVDAGNGPGDNPIRVG 282

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS-FCFLD 171
           I  R   ++ + +   L G         +R  +    +   G    V+  H KS  C   
Sbjct: 283 IIYRSTRLQPVGKPATLTGGPFVEH---SRVPLAQAFQGKRGAPFVVVANHFKSKGCRDA 339

Query: 172 SLENTYSPSCS-----LLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDF 224
           +  +                 AQ L  W+            V+ GDFN            
Sbjct: 340 AGADADQNDNQGCWNATRVTSAQQLHAWLQTDPTGTGAKDAVLLGDFNAYAMEDPI---- 395

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
            +T+        F   K     +         +D+ +++    K L   +      +E D
Sbjct: 396 -RTLHDLGWQDAFKVAKVEHPYSYVYNGYTGRLDHALLNPGMAKRLRGAAEWHSNADEQD 454

Query: 285 IKSRG-------KRLSDHCPISIDYD 303
                        R SDH P+ + +D
Sbjct: 455 ASGYQGRNVQGPWRSSDHDPLLLGFD 480


>gi|225862654|ref|YP_002748032.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB102]
 gi|225787518|gb|ACO27735.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB102]
          Length = 333

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 101/320 (31%), Gaps = 44/320 (13%)

Query: 17  TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +++ A         +++++ N+  LS      L+ N  +   +D      Y K  + D+V
Sbjct: 23  SSAQADTSTDQNNILKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVV 76

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120
            L E+   +A  ++           T         E         S       +A+  K 
Sbjct: 77  ILNEVFDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKW 136

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             V +  Y             N+  V   ++ N + + V+  HL++    DS+    SP+
Sbjct: 137 PIVEKVQYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA 192

Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234
            S+ + Q + ++D+I  +   +    +  GD N        N        +KT+  +   
Sbjct: 193 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 251

Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                             N        +DY +  ++       E+      +     +  
Sbjct: 252 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSW 311

Query: 290 KR------LSDHCPISIDYD 303
            +       SDH P+     
Sbjct: 312 LKKYTYNDYSDHYPVEATIS 331


>gi|255530733|ref|YP_003091105.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255343717|gb|ACU03043.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 281

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 96/311 (30%), Gaps = 38/311 (12%)

Query: 1   MIRKYVL--ALVFFLVPCTAS--VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           M  K  L  A++  +V   A    A  + ++S+NI   ++++G + W N           
Sbjct: 1   MKIKIQLCMAMLLLVVTVKAQRKPADYINVMSYNIRYNNDKDGENAWPNRK-------DE 53

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++   +  DADI+ +QE  +  A  ++     + +              S         V
Sbjct: 54  VKALVRFHDADILCVQEALALQA-DQLLENTNYEMAGVGRTDGKREGEFSAVYFDKTRFV 112

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLE 174
           +K          P   +K  +  A  R    + +  + N K+  V + H           
Sbjct: 113 KKDGGTFWLSDTPEKPSK-GWDAAIVRICTWVRLYDKWNKKEFMVFNTHYDHVG------ 165

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      + A+ +K  I +   + +P V+ GD N                D  +  
Sbjct: 166 ------VQARIESAKLIKKKIQEIAPA-LPVVLTGDLNVTPETEAITTIKTFLTDSKEVS 218

Query: 235 IRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                  +   N  K     K  IDY  ++           F    +         +  S
Sbjct: 219 EEPAYGPEGTFNGFKFNAPLKEKIDYIFIN---------RGFKVQKFAVLTDSKNQRYPS 269

Query: 294 DHCPISIDYDF 304
           DH PI     F
Sbjct: 270 DHLPIMARLFF 280


>gi|262384583|ref|ZP_06077717.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262293876|gb|EEY81810.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 306

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/324 (11%), Positives = 80/324 (24%), Gaps = 43/324 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K+     F L       A+ + + ++N+   +  +  +            Y  + Q  
Sbjct: 1   MKKFFYTFAFILCALMTLQAETMVVATYNLRNANGGDSTNGNG-----WGQRYPYIAQIV 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    DI   QE               +            +   S     T      K  
Sbjct: 56  QFHGFDIFGTQEGKYPQLQDLKQAMPGYDYIGVGRDDGKQAGEHSAIFYRTD-----KFE 110

Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +    + L    D     +     R                L  +L             
Sbjct: 111 VLEHGDFWLSEITDRPNKGWDAVLPRICTWGEFRDKQTGFTFLFFNLHMDHVG------- 163

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                  ++ A+ +   I +     +P ++ GDFN               I  +   I  
Sbjct: 164 ---VQARAESAKLILKKIKEF-PKRLPAILTGDFNVDQTSESYKLLDGSGIMRDSYEIAD 219

Query: 238 PKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFS-------------EIL 279
            +   +      +   K    ID+  + +        ++ +++                 
Sbjct: 220 FRYAPNGTFNGFHPDRKTDSRIDHLFLTKEFEVKKYGILTDTYRSEVKESAQKEQNGNFP 279

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
                 K   +  SDH P+ I  +
Sbjct: 280 KEVSLSKYEARTPSDHFPVMIVVE 303


>gi|319779595|ref|YP_004130508.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9]
 gi|317109619|gb|ADU92365.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9]
          Length = 260

 Score =  110 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 94/302 (31%), Gaps = 68/302 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + SWN+N+L+                     +  + +  D D++ LQE         
Sbjct: 3   TLTVASWNVNSLN----------------VRLDQVLDWLREFDVDLLCLQE--------- 37

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                +  I  S    I +         +  +A+  K+                      
Sbjct: 38  -LKMESQKIDSSLFESIGYGIYALGQKTYNGVALISKHPITDLVENL------PNYEDPQ 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +R +   + I+ K++ +++++  +   L+S + +Y        +    L+ +I  +  + 
Sbjct: 91  KRLLAGTLSIDKKQVRIVNVYCPNGSDLESPKFSYK------MEWFSALRTYIEDQLNTN 144

Query: 203 VPFVIAGDFNRKINYLGNN-------------DDFWKTIDPNDSLIRFPKEKDSRCNANK 249
              ++ GDFN        +                ++ +     +  F +  +   N+  
Sbjct: 145 ENLILTGDFNIAPKDEDIHPKYLGPILISPQERAHFEALLDLGLVDTF-RLFEQEQNSFS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ +   +  K   +          D  +   +R SDH P+  
Sbjct: 204 WWDYRQFGFKRNAGLRIDHILASSSLGKKCYKSWI-------DKKQRAHERPSDHAPVLA 256

Query: 301 DY 302
           ++
Sbjct: 257 EF 258


>gi|126695849|ref|YP_001090735.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9301]
 gi|126542892|gb|ABO17134.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9301]
          Length = 281

 Score =  110 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 89/301 (29%), Gaps = 63/301 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   +  + +  +   ++ DI+ LQE    +       
Sbjct: 3   IATWNVN----------------SIRTRLSQIIDWINQVNPDILCLQETKVMDD------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                        + +S        +  +A+  K      +     G  +S   +     
Sbjct: 41  ----NFPVEPFEKLGYSLEIYGQKSYNGVAIISKIKPENVKKG-FNGCTESNQNSEIFLD 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + L+  +   I ++++++ +   LDS +  Y             L  ++ ++++     
Sbjct: 96  QKRLISADINGIKIINVYVPNGSSLDSSKFAYK------INWLNCLSSFLDEQEKKGELI 149

Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPND-------SLIRFPKEKDSRCNANKNL 251
            + GDFN   + L  +D            I+ N         LI   +  +         
Sbjct: 150 CLMGDFNVAPSNLDIHDPKKYEGGIMASEIERNALKNVLKKRLIDSFRIFEQNTGHWSWW 209

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+  + +     L            D       R SDH P+ I+ 
Sbjct: 210 DYRNNGFELNKGWRIDHIYISKELTSKLKSCVI-------DCSPRGNLRPSDHAPVMIEL 262

Query: 303 D 303
           +
Sbjct: 263 N 263


>gi|222094431|ref|YP_002528490.1| sphingomyelinase c [Bacillus cereus Q1]
 gi|221238488|gb|ACM11198.1| sphingomyelinase C [Bacillus cereus Q1]
          Length = 338

 Score =  110 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 103/320 (32%), Gaps = 44/320 (13%)

Query: 17  TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +++ A         +++++ N+  LS      L+ N  +   +D      Y K  + D+V
Sbjct: 28  SSAQADTSTDQNNILKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVV 81

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120
            L E+   +A  ++           T         E         S+      +A+  K 
Sbjct: 82  ILNEVFDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 141

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             V +  Y             N+  V   ++ N + + V+  HL++    DS+    SP+
Sbjct: 142 PIVEKVQYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA 197

Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234
            S+ + Q + ++D+I  +   +    +  GD N        N        +KT+  +   
Sbjct: 198 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 256

Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                             N        +DY +  ++       E+      +     +  
Sbjct: 257 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTVTSW 316

Query: 290 KR------LSDHCPISIDYD 303
            +       SDH P++    
Sbjct: 317 LKKYTYDDYSDHYPVAATIS 336


>gi|330470654|ref|YP_004408397.1| 5'-nucleotidase domain-containing protein [Verrucosispora maris
           AB-18-032]
 gi|328813625|gb|AEB47797.1| 5'-Nucleotidase domain protein [Verrucosispora maris AB-18-032]
          Length = 1369

 Score =  110 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 83/312 (26%), Gaps = 39/312 (12%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76
              +R+ S+N+ N      G +    +          +      LDAD+V L+E+ +   
Sbjct: 451 GGDLRVASFNVLNYFVHFGGDARGAANEAALAKQEAKIVSAISALDADVVALEEIENSVR 510

Query: 77  ------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI--AVRKKNVRVLQQSY 128
                   A+ ++           T   +              I  A+  K     Q   
Sbjct: 511 FSSSDPQRALKRLVAALNTADGAGTWDYVRTPTELPGAAQQDFITTAIIFK-PAKAQPKG 569

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-----L 183
                 D       R  +            V+  H KS     S +N  S          
Sbjct: 570 ASRSVNDESVWFNAREPIAQTFTAGPLDFVVVANHFKSKSGAGSGDNADSGDGQGGWNGD 629

Query: 184 LSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
             +QA  L  ++ Q K        ++ GDFN           + K          +    
Sbjct: 630 RVRQATALATFVDQVKADSDTDNVLLLGDFNAYTQEDPMQVLYGK---------DYRNLN 680

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------KR 291
           ++   +         +D+ +   +    +      +I   E                  R
Sbjct: 681 NTGKTSYVFNGESGSLDHALASPSLADRVTGVDVWQINAVESYAFQYDGLAAFYAPDPYR 740

Query: 292 LSDHCPISIDYD 303
            SDH P+ +  +
Sbjct: 741 ASDHNPLVVGIN 752


>gi|294508721|ref|YP_003572780.1| Endonuclease/exonuclease/phosphatase family protein [Salinibacter
           ruber M8]
 gi|294345050|emb|CBH25828.1| Endonuclease/exonuclease/phosphatase family protein [Salinibacter
           ruber M8]
          Length = 358

 Score =  110 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 90/310 (29%), Gaps = 47/310 (15%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-- 75
            +    + + ++NI  LS                ++      Y +    DIV LQE+   
Sbjct: 48  TTRPDTLTVTTYNIGYLSGMRNNEPVVRPDSLFHANMDQAAGYLRAAAPDIVALQEIDFG 107

Query: 76  -----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI-------AVRKKNVRV 123
                  + +  +  +  +                                AV  +    
Sbjct: 108 GARAAHVHQLDTLAARLGYPGAAQAVNWDERYLPFPYGRPAVHFGRTLSGQAVLSRFPVR 167

Query: 124 LQQSYPLLGAKDSFSRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                 L     SF R     +R A   +V+++G+ + V+++HL++F             
Sbjct: 168 RHVRRTLPRPPQSFFRDAFYLDRLAQVGVVDVDGRPLAVINVHLEAFDVG---------- 217

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSL 234
                 QA+ + D   +  +  +P ++ GDFN  ++           D   + I     L
Sbjct: 218 --TRETQARVVNDLYRRLADRGIPTLLLGDFNSSLSSGEEGGQAGAEDATMQHILAGTDL 275

Query: 235 IRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                   +   +           ID+ +     ++ +  + +                 
Sbjct: 276 RSAVNTALADTASATYPADAPARTIDHILYSPQFFEAVDTKRWCGRPAP----------P 325

Query: 293 SDHCPISIDY 302
           SDHC ++   
Sbjct: 326 SDHCAVTAAL 335


>gi|37523646|ref|NP_927023.1| hypothetical protein gll4077 [Gloeobacter violaceus PCC 7421]
 gi|35214651|dbj|BAC92018.1| gll4077 [Gloeobacter violaceus PCC 7421]
          Length = 606

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/323 (12%), Positives = 95/323 (29%), Gaps = 47/323 (14%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               A V  ++++ S+N+       G     N  +        +    K +DAD+V L E
Sbjct: 291 TAAPAPVGGRLKVASFNVLNYFTTLGSRGAANDKE-FERQQGKVVAALKAIDADVVGLIE 349

Query: 74  MGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRVLQQSYPL 130
           + +    A+  +          +   ++    R +  +DI   I  + + V+      P+
Sbjct: 350 IQNNGLIALDNLTAALNKAYGRTVFDVVIPPLRGTGTDDIQVGIIYKPERVK------PV 403

Query: 131 LGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKS-FCFLDSLENTYSPSCS--- 182
             ++       +R  +    +           V+  H KS     D   +  +       
Sbjct: 404 GPSRSDPEPIFDRPPLAQTFQARRSGPRSTFTVVVNHFKSKGSCPDPGPDADADKGQGCW 463

Query: 183 --LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                 QA+ L  ++    +     ++ GD N             K +     +    + 
Sbjct: 464 NLRRVAQARKLLAFVKTLNDPD--VLVVGDLNAYGGEDPI-----KALGAGGLVSLNLRI 516

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289
             +   +         +D+ +   +  K +   +   +  +E  +               
Sbjct: 517 PAAERYSYVFEGQSGYLDHALATPSLDKQVTGITEWHVNSDEPPVIDYNTEYSRRNPAAK 576

Query: 290 ---------KRLSDHCPISIDYD 303
                     R SDH P+ +  +
Sbjct: 577 KDDRYEPTPYRSSDHDPVVVGLE 599


>gi|305666984|ref|YP_003863271.1| putative secreted protein [Maribacter sp. HTCC2170]
 gi|88709217|gb|EAR01451.1| probable secreted protein [Maribacter sp. HTCC2170]
          Length = 258

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 94/305 (30%), Gaps = 50/305 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M  K  L +V  +   + S A  +R++S+NI   +  +              +   +   
Sbjct: 1   MKLKLFLFIVICIGFKSFSQADTLRVMSFNILHGATTKNDF-----------NLDTIAGV 49

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               + D+V LQE+      AK +   T   F +    +  ++    +      AV    
Sbjct: 50  INKYNPDLVALQEVDFKTNRAKKYDLPTEIGFRTKMASLF-ARAMYYDGGEYGEAVLSNL 108

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179
             +  ++  L         +  R A+   V+  NG  I  +  HL            +  
Sbjct: 109 TFIGSENISLPHLP----TSEPRAALLTRVKTRNGNIIQFVGTHL-----------DHLR 153

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
             +    QA+ + + +     +  P ++ GD N   N                     P+
Sbjct: 154 DDTDRLMQAKAINEALG---STKYPTLLVGDLNDGPNSETIRILSENFHK--------PQ 202

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            + ++         K+ +D+ ++       +I        Y            SDHC + 
Sbjct: 203 LQAAKKKTWPADEPKVCLDHILLTNPKKWKVIDYEVICENY-----------ASDHCIVV 251

Query: 300 IDYDF 304
               F
Sbjct: 252 ATLVF 256


>gi|284033951|ref|YP_003383882.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813244|gb|ADB35083.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 293

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 86/320 (26%), Gaps = 55/320 (17%)

Query: 1   MIRKY--VLALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
           M+RK   ++A +  L   T +VA        +R+ ++NI+  +  + V            
Sbjct: 1   MVRKLAVLVAALTLLTGVTPAVADGNAPPVPLRVATYNIHAGAGHDNVF----------- 49

Query: 53  DYTLLRQYAKNLDADIVFLQEMG----SYNAVAKVFPKNTWCIFYSTERLINHSK---RD 105
           D        + LDAD++ LQE+       +    +  +    +         +     R 
Sbjct: 50  DLDRTETTLRALDADVIGLQEVDVHWSERSQWRDLVSELAQRLGMRAGFAPIYDFDPLRA 109

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN---RRAVELLVEINGKKIWVLDI 162
                   +AV  K   +  Q++ L         AG       +E +V+  G ++     
Sbjct: 110 GEPRRQYGLAVLSKAPILEVQNHNLTRLSTQDPGAGPTPMPGFLEAVVQAKGARLHFYVT 169

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           HL            Y    SL   +       +          ++ GD N +        
Sbjct: 170 HL-----------DYRADPSLRRTEVDETLKILADDPAGANQVLV-GDLNAEPQAAE--- 214

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
              +                              IDY  +         +          
Sbjct: 215 -LARLWPAMTDAWTAAPITTGNPLTYPAATPVKRIDYITVSDGVGVLRAEVPA------- 266

Query: 283 DDIKSRGKRLSDHCPISIDY 302
                     SDH P+  D 
Sbjct: 267 ---SPALLAASDHRPVVADL 283


>gi|58583572|ref|YP_202588.1| hypothetical protein XOO3949 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58428166|gb|AAW77203.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 342

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 96/301 (31%), Gaps = 33/301 (10%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +LAL   L    AS    +R++S+N+        V +  +  KR T   T +    K   
Sbjct: 71  ILALCITLPAFAASAPAPLRVMSFNVR-------VPMDSDGDKRWTVRRTSMVALIKQAH 123

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D+   QE+    A         +  F    R     +         A++V +       
Sbjct: 124 PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSVIES-GDFWL 182

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              P +    S++    R     L E   + ++ ++L+ HL                 + 
Sbjct: 183 SEIPEIPGSSSWNTDLPRMVTWALFERRNDKRRFYLLNTHLPH----------RDQDEAA 232

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
               A+ +   I     + +P V+ GDFN   +           +  +        +   
Sbjct: 233 REHVARVILSRIAT-LPADIPVVVTGDFNSDPDQGTYR--TLTAVLGDARAHVAKPQGPE 289

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +   N   +    ID+ +              +   ++  D +S G   SDH P+   ++
Sbjct: 290 KTFQNFTTQPTRRIDWILFRG----------LTPTRFSTLDARSGGILPSDHYPVLAAFE 339

Query: 304 F 304
           +
Sbjct: 340 W 340


>gi|82703533|ref|YP_413099.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196]
 gi|82411598|gb|ABB75707.1| Exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196]
          Length = 277

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 82/302 (27%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      + ++      D++ LQE          
Sbjct: 1   MKIATWNVNSL----------------KVRLPQVLEWLTLNQPDVLCLQET--------- 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S      +    S    +  +A+  +                 F     R
Sbjct: 36  -KLQDEHFPVSEIAAAGYQTIYSGQKTYNGVALLSRQPVSEV-----FTGMPGFEDPQKR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +        + V+ I++ +   + S +  Y        +    L++W+ +      
Sbjct: 90  LLGGVH-----DDVCVVCIYVPNGEHVTSEKYQYK------LRWLAALREWLREMLSRHR 138

Query: 204 PFVIAGDFNRKINYLGNND-------DFWKTIDPNDS-------LIRFPKEKDSRCNANK 249
             V+ GDFN        +D         +  ++            I   +  D    +  
Sbjct: 139 KLVVLGDFNIAPEDCDVHDSKLWEGKVLFSELERAAFREVLDLGFIDSFRLFDQPEKSFT 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++ +                  D    R +R SDH P+ +
Sbjct: 199 WWDYRMMAFRRNMGLRIDHILLSRELAGMCTACVI-------DKATRRLERPSDHAPVIV 251

Query: 301 DY 302
           + 
Sbjct: 252 EL 253


>gi|325105102|ref|YP_004274756.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
 gi|324973950|gb|ADY52934.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
          Length = 278

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 53/323 (16%), Positives = 87/323 (26%), Gaps = 68/323 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQ--------------------KVRLVSWNINTLSEQEGVS 41
           ++   + +   LV  ++                          +++S+NI+         
Sbjct: 1   MKNLKILIFVLLVSMSSISCGKSAAEPEKDNKPPVEEKSGPTFKVMSYNIH--------I 52

Query: 42  LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
               S   +  D   + Q       D+V L E+ +    +         +   T      
Sbjct: 53  GNPPSKDASYRDLEAIAQVINIQKPDLVALSEVDNKTKRSGTTVDQAKELGRLTGMYYYF 112

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           +K           AV  K      + Y L      F     R    +LVE  G K +   
Sbjct: 113 TKAMDYQGGEYGDAVLSKFPIAESKRYELPVTGTGF---EPRSLALILVEKEGHKFYFGS 169

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            HL      D+              QA  L D I        P V+AGD+N        N
Sbjct: 170 THLDHTSAEDN-----------RVLQANTLVDIIKSL---NYPLVLAGDWNALPTSQTIN 215

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
               K ++P            + C       +    IDY +        +         Y
Sbjct: 216 -ILKKALNP----------TCTDCPYTFPMNKPDRTIDYIMYKPAEKFKVKSLKVVNETY 264

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
                       SDH P+ +D +
Sbjct: 265 -----------ASDHLPLVVDLE 276


>gi|298373624|ref|ZP_06983613.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroidetes
           oral taxon 274 str. F0058]
 gi|298274676|gb|EFI16228.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroidetes
           oral taxon 274 str. F0058]
          Length = 339

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/347 (11%), Positives = 94/347 (27%), Gaps = 57/347 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV-----------KRT 50
           +RK  L ++  L          ++++S+N+  L +    SL+ +S            +R 
Sbjct: 1   MRKIYLTILSILFTVNLFSQDTLKIMSYNVENLFDTRDDSLYNDSEYLRGGLRGWTYERY 60

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +            ++ L E+ +YN + ++  K       +    I H +   
Sbjct: 61  RHKLYNIAKVVAAAGEWNPPFLIGLCEIENYNVLYELTNKTGLQ---NIGYKIIHYESPD 117

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165
              +   +       + +      +   ++ S    R  +     + NG  + V   H  
Sbjct: 118 ARGVDVGLLYLPNKFKPINSRPIRVQLPNTQST--TRDILYASGTLTNGDTLHVFVNHFP 175

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDD 223
           S    +        +       A++L++ +            +I GDFN   +       
Sbjct: 176 SRLGGELESEPRRLAV------ARYLREAVDSLFGINDKAKVLILGDFNDMPDNNSIVKV 229

Query: 224 FWKTIDPNDSLIRFPK--------EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                    +     +                 +  +    +D  ++     +   +   
Sbjct: 230 LGANPFSAGTTQVVDRKLYNITYKFHKEGRGTYRFQQQWNMLDQIIVSGALLQGGGKTEI 289

Query: 276 SE--------------------ILYNEDDIKSRGKRLSDHCPISIDY 302
            E                      +            SDH P+ +D 
Sbjct: 290 LEKSTRIFSPEWLLEDDKPTGKRPFRTYIGMRYNGGFSDHLPVLVDI 336


>gi|270307561|ref|YP_003329619.1| endonuclease/exonuclease/phosphatase family [Dehalococcoides sp.
           VS]
 gi|270153453|gb|ACZ61291.1| endonuclease/exonuclease/phosphatase family [Dehalococcoides sp.
           VS]
          Length = 639

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 88/288 (30%), Gaps = 54/288 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P     +  +R++++N++     +G             D   L +  +N  AD+V LQE+
Sbjct: 403 PAAPQFSGTLRIMTYNLHNGFNTQG-----------RLDMEALVRVIENSGADVVALQEI 451

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                ++       W      +RL  +S   +    +   A+  K   +   +  L    
Sbjct: 452 SRGWVISGRVDMLEWL----AQRLNMYSAFGATAGEYWGNAILSKYPILDTHNVSLESDG 507

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  +  ++++ G+ +++   HL                  +   QA  L D+
Sbjct: 508 LPIK----RGYLNAVLDLGGRYLYLAATHLHHVPEEGD----------VRLIQAGELADF 553

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                 +    VI GDFN + N           +           E  +      +    
Sbjct: 554 WDNAPST----VILGDFNAEPNSAEIGLLRQAGLSD-------SLEGQTSVLTYHSADLY 602

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             IDY     +    +  +SF+                SDH  +  D 
Sbjct: 603 QRIDYIWASPDI---VYVDSFTIFSL-----------ASDHLAVIADI 636


>gi|116051946|ref|YP_789211.1| extracellular nuclease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587167|gb|ABJ13182.1| predicted extracellular nuclease [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 780

 Score =  109 bits (272), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 99/329 (30%), Gaps = 45/329 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADI 68
           P   +V  ++R+ S+N+      +G           N+ +        +        ADI
Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 505

Query: 69  VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121
           V L E+ +      +A+A +       +         +  R    +++I   +  R   V
Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 565

Query: 122 -RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175
                 +         F    NR  +    +    G+++ +   HLKS    C  D    
Sbjct: 566 RIYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 625

Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
               +C+   ++ AQ L DW+            +I GD N        N      I    
Sbjct: 626 DGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRGAG 680

Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
                 ++  +    +         +D+ + + +  + +       I  +E  +      
Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 740

Query: 290 ---------------KRLSDHCPISIDYD 303
                           R SDH P+ I  D
Sbjct: 741 FKTPRQQDSLYNAEPYRASDHDPVVIGID 769


>gi|256426118|ref|YP_003126771.1| endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM
           2588]
 gi|256041026|gb|ACU64570.1| Endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM
           2588]
          Length = 308

 Score =  109 bits (272), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 89/328 (27%), Gaps = 45/328 (13%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M RK +L  VF ++   A +AQK+ + ++N+   + +E  +      +R       +   
Sbjct: 1   MKRKMLLMAVFTVLSY-AVMAQKMTVATYNMRNDNNKEDAAHGNGWKQRYPV----IASM 55

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            +    DI   QE   +           +            +   S    +  +    K 
Sbjct: 56  IRFHGFDIFGTQECMHHQLENLKDSLPGYAYIGIGRDDGKEAGEYSAIF-YNGV----KF 110

Query: 121 VRVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +    + +    D     +     R       +           +L            
Sbjct: 111 KLLEHGDFWMAEETDKPKKGWDAVLPRICTWGKFKEIKTGFTFYFFNLHMDHVG------ 164

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                   ++ A+ + D + +     +P ++ GDFN               +  +     
Sbjct: 165 ----VKARAESAKLVMDKVRKMAG-NIPTILTGDFNVDQQSESYTLINTSGLLKDAYETT 219

Query: 237 FPKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKFL------------------IQESFS 276
             +  ++      N  +K    ID+  + +                         + S +
Sbjct: 220 AIRYAENGTFNAFNPNSKTDSRIDHIFLTRQFRVEKYGILTDTYRGPVVTENGDDKVSSA 279

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +        K   +  SDH P+     +
Sbjct: 280 DFPKEVSLKKYVARVPSDHFPVMAIITW 307


>gi|313158021|gb|EFR57427.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 279

 Score =  109 bits (272), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 92/306 (30%), Gaps = 39/306 (12%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M R  ++ L+  +       A  + ++++N+   + ++G + W+   +R       +   
Sbjct: 1   MKR--LIYLLAAVAFTACGSATSLSVMTFNMRYDNPEDGQNNWRFRRER-------VAGV 51

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            K  + D++  QE+ S            +            S                 +
Sbjct: 52  IKAQEVDVLGTQELLSNQFNDLSGLLTGYQGVGVGRLDGVESGEYCAVFFRKDRFTLLDS 111

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179
                   P +     +  A  R A  +++   +G++ + +D HL         +     
Sbjct: 112 GTFWLSETPEVVGSLGWDGACERIATWVVLRDRDGREFFFIDTHL-----DHVGQVARDE 166

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
             SLL ++ + L            P ++ GDFN +             +  +   I   +
Sbjct: 167 GVSLLMKRIETL--------SGGRPVILTGDFNSEPGSSVVAHVQKDGVLRDAKAIAAQR 218

Query: 240 EKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                  +  +        +  +DY  +  +            + Y        G  +SD
Sbjct: 219 SGTD--WSFSDFGQIPEAERPLLDYIFVSGD---------IEAVRYEVLPDTFDGGYVSD 267

Query: 295 HCPISI 300
           H P+  
Sbjct: 268 HAPVMA 273


>gi|301309194|ref|ZP_07215138.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300832876|gb|EFK63502.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 306

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 80/324 (24%), Gaps = 43/324 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK+     F L       A+ + + ++N+   +  +  +            Y  + Q  
Sbjct: 1   MRKFFYTFAFILCALMTLQAETMVVATYNLRNANGSDSTNGNG-----WGQRYPYIAQIV 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    DI   QE               +            +   S     T      K  
Sbjct: 56  QFHGFDIFGTQEGKYPQLQDLRQAMPGYDYIGVGRDDGKQAGEHSAIFYRTD-----KFE 110

Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +    + L    D     +     R                L  +L             
Sbjct: 111 VLEHGDFWLSEITDRPNKGWDAVLPRICTWGEFRDKQTGFTFLFFNLHMDHVG------- 163

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                  ++ A+ +   I +     +P ++ GDFN               I  +   I  
Sbjct: 164 ---VQARAESAKLILKKIKEF-PKRLPAILTGDFNVDQTSESYKLLDGSGIMRDSYEIAD 219

Query: 238 PKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFS-------------EIL 279
            +   +      +   K    ID+  + +        ++ +++                 
Sbjct: 220 FRYAPNGTFNGFHPDRKTDSRIDHLFLTKEFEVKKYGILTDTYRSEVKESAQKEQNGNFP 279

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
                 K   +  SDH P+ I  +
Sbjct: 280 KEVSLSKYEARTPSDHFPVMIVVE 303


>gi|149279450|ref|ZP_01885580.1| hypothetical protein PBAL39_16661 [Pedobacter sp. BAL39]
 gi|149229743|gb|EDM35132.1| hypothetical protein PBAL39_16661 [Pedobacter sp. BAL39]
          Length = 304

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 93/326 (28%), Gaps = 48/326 (14%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           MIR ++L   F L+    S AQ++ + ++N+   +  +  +         +    ++   
Sbjct: 1   MIRYFLLG--FALLFTQNSFAQQINIATYNVRYKNSGDEKNGNG-----WSQRMPVVTDI 53

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            +  D DI   QE+              +            +   +          + K 
Sbjct: 54  IQFHDFDIFGAQEILQQQLNDLDSKLTGYGHVGVGRDDGKRAGEHAMIFYK-----KDKF 108

Query: 121 VRVLQQSYPLLGAKD----SFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLE 174
             +   ++ L   +D     +  A  R       +   +G+K +  + H     F     
Sbjct: 109 KLLDSGNFWLSKQEDVPNKGWDAALPRICSWGAFQHLASGRKFYFFNTH-----FDHVGV 163

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                S  L+ ++ + +            P ++ GDFN             + +      
Sbjct: 164 VARRESAKLILRKIRAIA--------GDTPTILTGDFNVDQTNEIYGILTGQQLADAFET 215

Query: 235 IRFPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQ----------------ESFSE 277
             F    +   N    N + K  ID+ ++ ++                        +   
Sbjct: 216 TAFRYATNGTINHFDINTKTKSRIDHILLSKSIKVKRYGVLTDTYRSAGKENAEVSTSGN 275

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
                   +   +  SDH P+    D
Sbjct: 276 FPKEVSLQRYEARLPSDHFPVMAVID 301


>gi|84625383|ref|YP_452755.1| hypothetical protein XOO_3726 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84369323|dbj|BAE70481.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 319

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 96/301 (31%), Gaps = 33/301 (10%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +LAL   L    AS    +R++S+N+        V +  +  KR T   T +    K   
Sbjct: 48  ILALCITLPAFAASAPAPLRVMSFNVR-------VPMDSDGDKRWTVRRTSMVALIKQAH 100

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D+   QE+    A         +  F    R     +         A++V +       
Sbjct: 101 PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSVIES-GDFWL 159

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              P +    S++    R     L E   + ++ ++L+ HL                 + 
Sbjct: 160 SETPEIPGSSSWNTDLPRMVTWALFERRNDKRRFYLLNTHLPH----------RDQDEAA 209

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
               A+ +   I     + +P V+ GDFN   +           +  +        +   
Sbjct: 210 REHVARVILSRIAT-LPADIPVVVTGDFNSDPDQGTYR--TLTAVLGDARAHVAKPQGPE 266

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +   N   +    ID+ +              +   ++  D +S G   SDH P+   ++
Sbjct: 267 KTFQNFTTQPTRRIDWILFRG----------LTPTRFSTLDARSGGILPSDHYPVLAAFE 316

Query: 304 F 304
           +
Sbjct: 317 W 317


>gi|224536510|ref|ZP_03677049.1| hypothetical protein BACCELL_01385 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521867|gb|EEF90972.1| hypothetical protein BACCELL_01385 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 296

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 84/299 (28%), Gaps = 33/299 (11%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L+      +A   Q + ++++N+   +  +  + WK            + Q       
Sbjct: 23  LMLLGSCKNQSAQNEQPLEVMTFNVRLDAPSDSANNWKYRK-------DNVCQMITYYQP 75

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ +QE+              +            +        ++      +       
Sbjct: 76  DLLGMQEVRHNQMEDLKQGLPQYTALGVGRDDGKEAGEYCPIFFNSHRFTLVEYGNFSLS 135

Query: 127 SYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             P       +  + NR     ++  + NGKK+   + HL      +  E        L+
Sbjct: 136 EQPETIGIKGWDASYNRITTWAILQEKSNGKKLVFFNTHL-----DNDGEIARKEGVQLI 190

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             + + +           +P +I GDFN   +           ++    +          
Sbjct: 191 LNKIKEIA--------PHMPAIITGDFNCTPDETPLQTLEKGGMENASKVAAITYGPSWS 242

Query: 245 CNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +    L  +    +DY  +                 Y     +     LSDH P+ +D
Sbjct: 243 FHDFGRLPLEERVLLDYVFVSGGM---------KTNRYRVIQDRPENGFLSDHDPVLVD 292


>gi|288801368|ref|ZP_06406822.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288331751|gb|EFC70235.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 310

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 90/323 (27%), Gaps = 36/323 (11%)

Query: 2   IRKYV--LALVFFLVPC-TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +RK    +AL   L+     + AQ + + S+NI   +  +  + +            ++ 
Sbjct: 1   MRKITKRIALSLLLLSTGVITYAQSLFVGSYNIRYKNNNDAKAGFV-----WQKRCQVIC 55

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              K  + DI   QE+        +    T+            +   +    +     + 
Sbjct: 56  DQLKFENPDIFGAQEVLVEQLHDMLQQLPTYNYIGVGRDDGKEAGEYAAIFYNKNEIEKL 115

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K+        P    +  +  A  R       +           +L +            
Sbjct: 116 KDGHFWLAENPN-QPQLGWDAACVRICTWGKFKQKTTGFTFYFFNLHTDHVG-------- 166

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                  + A+ +   I +      P ++ GDFN        +      +  +   I   
Sbjct: 167 --VIARREAAKLVIRKIKEIAGQNAPVILTGDFNVDQKDETYDLFVNSGLLNDSYTIAKN 224

Query: 239 KEKDSRCNANKNLRNK--IPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRG---- 289
           +  ++    + +   K    ID+  + +        ++  S+       +  K +     
Sbjct: 225 RFAENGTFNDFDSDTKTDSRIDHIFLTKPFEVQRYGVLTNSYWTEDKTSEARKGKDAPQQ 284

Query: 290 --------KRLSDHCPISIDYDF 304
                   +  SDH P+     +
Sbjct: 285 INLKHFTRRNPSDHYPVFAKIKW 307


>gi|264679401|ref|YP_003279308.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2]
 gi|262209914|gb|ACY34012.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2]
          Length = 260

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 70/305 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ +WN+N+LS                     +  +      D + LQE+   +    
Sbjct: 2   TMKIATWNVNSLS----------------VRLPQVLDWLAANPVDALGLQELKLTDD--- 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                     +       +         +  +A   ++         + G  D  +R   
Sbjct: 43  -------KFPHMAFEEAGYKAVSHGQKTYNGVAWITRDTGRDVVRN-IPGLDDEQAR--- 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +   ++    +I +++ +  +     S +  Y        +  Q L DWI  +    
Sbjct: 92  --IIATTIDSPNGEIRLINGYFVNGQEPGSEKFAYK------MRWLQALHDWIQNQMTLH 143

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
              V+ GDFN       + D                 ++ +        F +  +    +
Sbjct: 144 PRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERDHFQRLLQLGLSDAF-RMFEQPEKS 202

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++ +     +   S        D    + K+ SDH P+
Sbjct: 203 YSWWDYRMLGFQKNRGLRIDHILVSEALKSKVSACSV-------DRAPRKNKQPSDHAPV 255

Query: 299 SIDYD 303
            +  D
Sbjct: 256 VVTLD 260


>gi|218681503|ref|ZP_03529390.1| hypothetical protein RetlC8_22861 [Rhizobium etli CIAT 894]
          Length = 242

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 84/286 (29%), Gaps = 51/286 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++L+++N+++    +              D   +       +ADIV LQE+    +  
Sbjct: 4   KSIKLLTYNVHSCIGSDR-----------KLDPGRIASVIAEAEADIVALQEVDV--SRR 50

Query: 82  KVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +    +      S  ++  H     S  +     A+         ++ PL          
Sbjct: 51  RTGGVDQAHAIASPLKMQAHFHPALSIAEEQYGDAIITALPTGAVKAGPLPSIG------ 104

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQK 198
             R A+ + V +  +K+ V++ HL                     +Q   L +  W+   
Sbjct: 105 EQRGALSVEVLVGDRKLLVVNTHLGLRG-------------RERIRQMTTLLNAGWLHGS 151

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
               +P ++ GDFN             +++              +           + ID
Sbjct: 152 VGESLPAILCGDFNAIPASAT-YRLAARSLKDAQLA-----GSTAARATFPARYPLMRID 205

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +  +  +                        +  SDH P+  +  F
Sbjct: 206 HIFVTDDLVVKRSAVM----------ESRLTRVASDHLPLLAEIGF 241


>gi|260061391|ref|YP_003194471.1| hypothetical protein RB2501_07320 [Robiginitalea biformata
           HTCC2501]
 gi|88785523|gb|EAR16692.1| hypothetical protein RB2501_07320 [Robiginitalea biformata
           HTCC2501]
          Length = 255

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 76/281 (27%), Gaps = 31/281 (11%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +S+NI   +  +G   W             L         D+V  QE   +         
Sbjct: 1   MSYNIRYDNPGDGRDSWDQRK-------EFLIAQIAYHAPDVVGTQEGLLHQLRDMEVAL 53

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             +  F       +     +    +T      +         P + +K  +  A NR   
Sbjct: 54  EGYAFFGKGRDQGDDQGEHTAVFYNTGQLELLEEETFWLSETPEVPSK-GWDAALNRVCT 112

Query: 147 ELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                   +G++ ++ + H     F    E     S SL+ +Q   +         + +P
Sbjct: 113 YGRFRHRPSGREFYLFNTH-----FDHVGEAARRESVSLILRQMARVNA-------AGLP 160

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPIDYFVMD 263
            V+ GD N + +            D  D   +         N           IDY    
Sbjct: 161 VVLMGDLNLEPDSAPIRQLANSMDDAFDQAGQAAYGPPGTFNGFDCTQPVTRRIDYIFTG 220

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      F+   +      +     SDH P+    +F
Sbjct: 221 PG--------DFTVRSHAILSEFTGLGFPSDHFPVLARLEF 253


>gi|167850682|ref|ZP_02476190.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei B7210]
          Length = 624

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  S 
Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 583 DAYRSSDHDPVLIDI 597


>gi|134278080|ref|ZP_01764794.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 305]
 gi|134249864|gb|EBA49944.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 305]
          Length = 624

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  S 
Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 583 DAYRSSDHDPVLIDI 597


>gi|254301107|ref|ZP_04968551.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 406e]
 gi|157811458|gb|EDO88628.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 406e]
          Length = 624

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  S 
Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 583 DAYRSSDHDPVLIDI 597


>gi|126442413|ref|YP_001063630.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 668]
 gi|167724713|ref|ZP_02407949.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei DM98]
 gi|217422484|ref|ZP_03453987.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 576]
 gi|254193781|ref|ZP_04900213.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei S13]
 gi|126221904|gb|ABN85409.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 668]
 gi|169650532|gb|EDS83225.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei S13]
 gi|217394715|gb|EEC34734.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 576]
          Length = 624

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  S 
Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 583 DAYRSSDHDPVLIDI 597


>gi|126455741|ref|YP_001076529.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106a]
 gi|242311247|ref|ZP_04810264.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106b]
 gi|254186048|ref|ZP_04892566.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254264734|ref|ZP_04955599.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710a]
 gi|126229509|gb|ABN92922.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106a]
 gi|157933734|gb|EDO89404.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|242134486|gb|EES20889.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106b]
 gi|254215736|gb|EET05121.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 624

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  S 
Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 583 DAYRSSDHDPVLIDI 597


>gi|319650796|ref|ZP_08004935.1| hypothetical protein HMPREF1013_01541 [Bacillus sp. 2_A_57_CT2]
 gi|317397653|gb|EFV78352.1| hypothetical protein HMPREF1013_01541 [Bacillus sp. 2_A_57_CT2]
          Length = 926

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 85/325 (26%), Gaps = 64/325 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGS 76
               ++ + S+N+   S +                 T L +         DI+ L E+  
Sbjct: 484 PEEDQLTIASYNVENFSTKTDA-----------EKVTRLAEAIVKNMKHPDIIGLTEVQD 532

Query: 77  YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            +                     K      +  +                +I        
Sbjct: 533 NDGPTDSGTTEADLSAALLIEKIKELGGPAY-TYTDIAPEDKQDGGQPGGNIRVGFLYNA 591

Query: 119 KNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           + V + +                    P      + +   +R+A+    E  G+ + V+ 
Sbjct: 592 ERVTLSEGEKGSATDAVDFEDGKLTLNPGRIDPANEAFEDSRKALAAQFEFKGESVIVVA 651

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
            H  S      L     P    S     + A  +  ++     ++     V+ GDFN   
Sbjct: 652 NHFNSKGGDLPLFGKVQPPVLNSEIQRMKIANVVNGFVRDVKAEDPNANIVLLGDFNDFE 711

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                     K +  ++      K +           N   +D+ ++  N  K       
Sbjct: 712 FSNP-----LKALKGDELTNMIEKVRAEERYTYNYQGNAQVLDHILVSNNLAKKTE---- 762

Query: 276 SEILYNEDDIKSRGKRLSDHCPISI 300
            +IL+          R SDH P+ I
Sbjct: 763 VDILHINSGFMEEHGRASDHDPVMI 787


>gi|187927854|ref|YP_001898341.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J]
 gi|187724744|gb|ACD25909.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J]
          Length = 818

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 85/319 (26%), Gaps = 47/319 (14%)

Query: 20  VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               VR+ S+N+ N  +     + + +   R              +    + L+AD+V L
Sbjct: 454 AQADVRVASFNVLNYFNGDGKGAGFDDPANRGAKTQAEFERQEAKIVAAIRALNADVVGL 513

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPL 130
            E+ +         +       +  R ++        + I  AI    + V       P+
Sbjct: 514 MEIENDGYGDLSAIRRLTSQLGADWRYVDPGVPKLGGDAITVAIVYNSRTVE------PV 567

Query: 131 LGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS-FCFLDSLENTYSPSCS----- 182
                      NR+ +        + +   V+  HLKS  C   + ++            
Sbjct: 568 GAPATLAIDNRNRQPLARSFRRIGDTQNFTVVVNHLKSKGCSGATGKDADQGDGQSCWNP 627

Query: 183 LLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
              + A  + DW+      +     ++ GD N                          K 
Sbjct: 628 TRVRAAGLIADWLATSPTGVADVGQLLIGDLNSYAKEDPV-----VLFAQKGYADMVAKF 682

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------ 288
                 +         ID+ +      + +       I  +E                  
Sbjct: 683 VGKDAYSYVYGGESGYIDHALATPGLAERVRAVHEWHINADEPIALEYAFGHKSAEQQQT 742

Query: 289 -----GKRLSDHCPISIDY 302
                  R SDH P+ +D 
Sbjct: 743 FYAPDAYRSSDHDPVLVDL 761


>gi|313675898|ref|YP_004053894.1| endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126]
 gi|312942596|gb|ADR21786.1| Endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126]
          Length = 272

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 88/302 (29%), Gaps = 30/302 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           + KY +     L+    S +Q  ++ ++NI   + +EGV  W N           + +  
Sbjct: 1   MLKYGMIFSVVLLFSVNSFSQT-KVCTFNIKYENPKEGVHQWDNRK-------EQILKLI 52

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           K  D DI+ +QE+              +                S             + 
Sbjct: 53  KIEDVDIIGMQEVVHSQIRFLEAGLAEYARIGVARDDGKSKGEYSPIFYKKDRYTIIDSA 112

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                  P + AK ++  A  R      +     K  +L ++     F        + S 
Sbjct: 113 TFWLSPNPQIPAK-AWDAALPRVCTWAKLIDQDTKDLILVLNTH---FDHVGSEARAKSV 168

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L+  +   L+             ++ GDFN +             ++            
Sbjct: 169 DLILSKINELE--------HNGKVILMGDFNLEPQSKPIQKIIDSELNDAFEAELNLGPI 220

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +          +  IDY             + F    Y    ++ +   LSDH P+ ++
Sbjct: 221 GTYNAFKIGENYERRIDYVFY----------QGFKIKSYKNYSLRIQDTFLSDHFPVVVE 270

Query: 302 YD 303
           ++
Sbjct: 271 FE 272


>gi|229010104|ref|ZP_04167318.1| Sphingomyelinase C [Bacillus mycoides DSM 2048]
 gi|228751237|gb|EEM01049.1| Sphingomyelinase C [Bacillus mycoides DSM 2048]
          Length = 333

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 103/310 (33%), Gaps = 37/310 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+   NA
Sbjct: 33  QNNTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYMK--NQDVVILNEVFDNNA 86

Query: 80  VAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
             ++           T         E         S+      +A+  K   V +  Y +
Sbjct: 87  SNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQY-V 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      N+  V   V+ N + + V+  HL++    D++    SP+ S+ ++Q Q 
Sbjct: 146 FEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQLQE 201

Query: 191 LKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           ++++I  +   +    +I GD N        N        +KT+  +             
Sbjct: 202 IQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDA 261

Query: 245 C-----NANKNLRNKIPIDYFVMDQNAY-----KFLIQESFSEILYNEDDIKSRGKR-LS 293
                   N        +DY +  ++       +  + +S S        +K       S
Sbjct: 262 TTNSIAKYNFPDSPAEYLDYIITSKDHANPSYIENKVLQSKSPQWTVTSWLKEYTYNDYS 321

Query: 294 DHCPISIDYD 303
           DH P+     
Sbjct: 322 DHYPVEATIS 331


>gi|108762235|ref|YP_632710.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108466115|gb|ABF91300.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 329

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 88/300 (29%), Gaps = 39/300 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ--------EGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           P   ++   VR+ ++N+  L +                 +          L      L+A
Sbjct: 53  PPDTALEGSVRIATFNVQRLFDTVCDSDACGGSNYEALPTPSEFGLQADRLASAISRLNA 112

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V L E+ +  ++  +  +          R       ++       +AV   +     +
Sbjct: 113 DVVLLAEVETQASLDALTSRLP--------RFGYSELGETGAAASVDVAVLSVHPITDVR 164

Query: 127 SYPL--LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            +    L   D  +   +R  +E+ ++++GKK+ V   H +S    D+            
Sbjct: 165 GHRERTLWRPDGSATRFSRELLEVHLDVDGKKVIVFSAHFRSKSNDDAG---------RR 215

Query: 185 SQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             +A   +D +    ++      V+ GD N                     L        
Sbjct: 216 FAEAVATRDIVAGAAQAAPDALVVLGGDLNDVPGSEPIT----ALERDGALLRVSSDRPA 271

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           S         +   ID+  +           ++    +        G   SDH  +  D+
Sbjct: 272 SETWTYTYHGDTQAIDHLYL------ARGGGTYVPGSFRAARDPRGGYGGSDHAAVFADF 325


>gi|166714173|ref|ZP_02245380.1| nuclease [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 572

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 84/324 (25%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+N+       G      +       ++  +    L   
Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +    A            +         I+       + I   I 
Sbjct: 316 IVPLGADVAALMELENDGNAADAAVAQLVAALNAAGKDKDWHFIDSGSGPGADAIRVGIV 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +        G    V+  H KS  C   S 
Sbjct: 376 YRSSQVTPVGKPATLTGGPFDNH---SRVPLAQAFRSTRGATFVVVANHFKSKGCGNASG 432

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L  W+            V+ GDFN     +        
Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKRAVLLGDFNAYAMEMPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L       I  +  D  
Sbjct: 489 -LRASGWQDAFAVAGVKQPYSFVYDGMSGRLDHALLSPAMAKQLRGAVEWHINADVMDAA 547

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571


>gi|53716715|ref|YP_105078.1| putative extracellular nuclease [Burkholderia mallei ATCC 23344]
 gi|53722864|ref|YP_111849.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|67643158|ref|ZP_00441906.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|121597344|ref|YP_991036.1| putative extracellular nuclease [Burkholderia mallei SAVP1]
 gi|124382710|ref|YP_001025437.1| putative extracellular nuclease [Burkholderia mallei NCTC 10229]
 gi|126447726|ref|YP_001077497.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei NCTC 10247]
 gi|167820854|ref|ZP_02452534.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 91]
 gi|254177252|ref|ZP_04883908.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei ATCC 10399]
 gi|254203011|ref|ZP_04909373.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei FMH]
 gi|254208344|ref|ZP_04914693.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei JHU]
 gi|52213278|emb|CAH39321.1| putative endonuclease/exonuclease/phosphatase family protein
           [Burkholderia pseudomallei K96243]
 gi|52422685|gb|AAU46255.1| putative extracellular nuclease [Burkholderia mallei ATCC 23344]
 gi|121225142|gb|ABM48673.1| putative extracellular nuclease [Burkholderia mallei SAVP1]
 gi|126240580|gb|ABO03692.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei NCTC 10247]
 gi|147746056|gb|EDK53134.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei FMH]
 gi|147751031|gb|EDK58099.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei JHU]
 gi|160698292|gb|EDP88262.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei ATCC 10399]
 gi|238524427|gb|EEP87860.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|261826943|gb|ABN00602.2| putative extracellular nuclease [Burkholderia mallei NCTC 10229]
          Length = 624

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  S 
Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 583 DAYRSSDHDPVLIDI 597


>gi|317504528|ref|ZP_07962503.1| endonuclease/exonuclease/phosphatase [Prevotella salivae DSM 15606]
 gi|315664350|gb|EFV04042.1| endonuclease/exonuclease/phosphatase [Prevotella salivae DSM 15606]
          Length = 283

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 70/303 (23%), Gaps = 25/303 (8%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++++    +  L+ C   +AQ   + ++NI   +  +                  L  + 
Sbjct: 1   MKRFTFLAITLLLGCNL-MAQSFYVGTYNIRYNNPDDIAEGNA-----WKQRCPHLCDFI 54

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                 I   QE+            + +            +   +     +       + 
Sbjct: 55  NFEQPVIFGTQEVLVDQLHDLQKGLDHYSTLGVGREDGKEAGEYAAIFFKSDALKCLDSG 114

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                  P       +  A  R       E    K      +                S 
Sbjct: 115 YFWLSETPN-KPSLGWDAACIRICTWGKFEDKASKKTFFFFNTHM---DHVGTKARRESA 170

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L+  Q + +              ++ GDFN               +  +       +  
Sbjct: 171 HLILNQIKAIAK--------NNHVILTGDFNVDQTDEIYKIFSDSGLLRDCYANAKQRMA 222

Query: 242 DSRCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 +     +    ID+  +  +            I  N   +    + +SDH P+ 
Sbjct: 223 PIGTWNDYMQDYRDMARIDHIFVSNDFNIEHYG-----IFTNSYWLGKTRRNISDHYPVM 277

Query: 300 IDY 302
           +  
Sbjct: 278 VKL 280


>gi|254882565|ref|ZP_05255275.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           4_3_47FAA]
 gi|319642095|ref|ZP_07996761.1| hypothetical protein HMPREF9011_02361 [Bacteroides sp. 3_1_40A]
 gi|254835358|gb|EET15667.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           4_3_47FAA]
 gi|317386361|gb|EFV67274.1| hypothetical protein HMPREF9011_02361 [Bacteroides sp. 3_1_40A]
          Length = 336

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 38/341 (11%), Positives = 97/341 (28%), Gaps = 47/341 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50
           ++K +L L    +       +  R++ +N+  L + +  +L  +           +  R 
Sbjct: 1   MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +           D+V L E+ + + +  +   +          + +      
Sbjct: 61  HDKLAKIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSPDE-- 118

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165
              I  A+  ++ + ++L +   L        R   R  + ++ ++ +G  + V   H+ 
Sbjct: 119 -RGIDVALLYQRGSFKLLGK-NSLSVPYKEMERRPTRDILHVMGQVASGDTLDVFVCHMP 176

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
           S    +     Y     L + Q   +              +I GDFN             
Sbjct: 177 SRAGGEEKSEPYR----LFTAQILNIAADSIMNLRQHPNVMIMGDFNDYPTNNSIAKVLG 232

Query: 226 KTIDPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-------QNAYKFLIQESF- 275
                 +  +   +      +    +       +D  ++         +      +    
Sbjct: 233 AVAPKGEVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSGFLLQGHDSMRTSYDKAQIL 292

Query: 276 -------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                         +I       K      SDH P+ +D++
Sbjct: 293 KYPFLLEEDEKYGGDIPSRTYWGKKYHGGYSDHLPVCVDFE 333


>gi|167907619|ref|ZP_02494824.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei NCTC 13177]
          Length = 624

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYDEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  S 
Sbjct: 468 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 583 DAYRSSDHDPVLIDI 597


>gi|308070047|ref|YP_003871652.1| extracellular nuclease [Paenibacillus polymyxa E681]
 gi|305859326|gb|ADM71114.1| Predicted extracellular nuclease [Paenibacillus polymyxa E681]
          Length = 691

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 84/321 (26%), Gaps = 59/321 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+ + S+N+      +G        KR       +    K    DI+ L E+   N    
Sbjct: 332 KLTVASFNVENFDPGDG--------KRIDQLGQAIA--VKLNHPDIIGLLEVQDNNGEKD 381

Query: 83  V-----------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
                                     F       N        +I        + V +  
Sbjct: 382 DGTTDASESFRVLIEAIRARGGPKYAFTDIAPDNNKDGGAPGGNIRVGFLYNPQRVTLTD 441

Query: 126 QS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
           +                   P      + S   +R+ +    E  G+++ V+  H  S  
Sbjct: 442 KPKGDSVTSVTYGVQGLSLNPGRIDPLNASLEDSRKPLAAEFEFEGQQVIVVANHFNSKG 501

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE------SLVPFVIAGDFNRKINYLGNND 222
              +      P       Q   +   +    +           V+ GD N          
Sbjct: 502 GDQAPFGGIQPPVRSSEIQRAKIATIVNGFVKSVLQVNPKANMVVLGDLNDFQFS----- 556

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
           +    +   +         +    +  +  N   +D+ ++  +  K     S  +I++  
Sbjct: 557 ETLALLRGQELTNLIDHLDEKERYSYIHEGNSQTLDHMLVSPSLSK----TSVLDIVHMN 612

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
            D  +   R+SDH P+    D
Sbjct: 613 ADFSAADGRVSDHDPLVAQID 633


>gi|296387571|ref|ZP_06877046.1| predicted extracellular nuclease [Pseudomonas aeruginosa PAb1]
          Length = 780

 Score =  108 bits (270), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 100/329 (30%), Gaps = 45/329 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADI 68
           P   +V  ++R+ S+N+      +G           N+ +        +        ADI
Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 505

Query: 69  VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121
           V L E+ +      +A+A +       +         +  R    +++I   +  R   V
Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 565

Query: 122 RV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175
           R     +         F    NR  +    +    G+++ +   HLKS    C  D    
Sbjct: 566 RTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 625

Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
               +C+   ++ AQ L DW+            +I GD N        N      I    
Sbjct: 626 DGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRGAG 680

Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
                 ++  +    +         +D+ + + +  + +       I  +E  +      
Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 740

Query: 290 ---------------KRLSDHCPISIDYD 303
                           R SDH P+ I  D
Sbjct: 741 FKTPRQQDSLYNAEPYRASDHDPVVIGID 769


>gi|56476029|ref|YP_157618.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1]
 gi|56312072|emb|CAI06717.1| Exodeoxyribonuclease III [Aromatoleum aromaticum EbN1]
          Length = 253

 Score =  108 bits (270), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 80/302 (26%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  +      D++ LQE          
Sbjct: 1   MKIATWNVNSL----------------KVRLPHVLDWLAANRPDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    S    +  +A+  +       +   +G          +
Sbjct: 35  LKLEDKSFPSAEIEAAGYHAAFSGQKTYNGVAILSR------SALAGIGHGIPGFDDEQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V+  +  +   + S +  Y        +    L +W+ ++ ++  
Sbjct: 89  RVLAATVN----GVRVICGYFPNGQAVGSEKFAYK------LRWLAALTEWLREELKAHQ 138

Query: 204 PFVIAGDFNRKINY-------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             V+ GDFN                         +  +        +         +   
Sbjct: 139 RLVLTGDFNIAPEDRDAHPDWKDEIHVSPAERAAFAALTGLGLADAYRLFPQDD-KSFSW 197

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ++          ID+ ++           +        D    + +R SDH P+  +
Sbjct: 198 WDYRMGAFRRNFGLRIDHILLSPALRDVCCACTI-------DKAPRKLERPSDHAPVIAE 250

Query: 302 YD 303
            +
Sbjct: 251 LE 252


>gi|260828432|ref|XP_002609167.1| hypothetical protein BRAFLDRAFT_92542 [Branchiostoma floridae]
 gi|229294522|gb|EEN65177.1| hypothetical protein BRAFLDRAFT_92542 [Branchiostoma floridae]
          Length = 429

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 85/289 (29%), Gaps = 17/289 (5%)

Query: 24  VRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNA 79
            R++ WNI    LS   +       +          + +  +  D+D++  QE+   ++ 
Sbjct: 145 FRVMQWNILAQALSQADDSFVRCPPAALNWDVRKFRILEEIRTYDSDVLCFQEVDHYHDF 204

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +        +   +  +         +NN     A+  +K    ++     +L ++   +
Sbjct: 205 LEPALKSLGYRGLFYPKPDSPALYCPNNNGPDGCALFFKKDKFSLVDADGIVLSSRGFET 264

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                 A+   ++ +           K F    +          L S+Q + L     + 
Sbjct: 265 NQ---VALFAKLQFSDPS----TGGAKPFVLGVTHLKARKGWERLRSEQGKDLLKQTQKF 317

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL----IRFPKEKDSRCNANKNLR-N 253
                P V+ GDFN +      +      +  N +          E        +     
Sbjct: 318 SGKGTPVVLCGDFNAEPTEHVYSVMSQSKMKLNSAYKSLSDDKTSEPVYTTWTVRTDGEW 377

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  +DY    ++ ++              +         SDH  +  D+
Sbjct: 378 RQTLDYIFFSKDKFQVETCLEIPPEELVGETRLPSHTYPSDHLSLVCDF 426


>gi|218889810|ref|YP_002438674.1| predicted extracellular nuclease [Pseudomonas aeruginosa LESB58]
 gi|218770033|emb|CAW25795.1| predicted extracellular nuclease [Pseudomonas aeruginosa LESB58]
          Length = 780

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 100/329 (30%), Gaps = 45/329 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADI 68
           P   +V  ++R+ S+N+      +G           N+ +        +        ADI
Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 505

Query: 69  VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121
           V L E+ +      +A+A +       +         +  R    +++I   +  R   V
Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 565

Query: 122 RV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175
           R     +         F    NR  +    +    G+++ +   HLKS    C  D    
Sbjct: 566 RTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 625

Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
               +C+   ++ AQ L DW+            +I GD N        N      I    
Sbjct: 626 DGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRSAG 680

Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
                 ++  +    +         +D+ + + +  + +       I  +E  +      
Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 740

Query: 290 ---------------KRLSDHCPISIDYD 303
                           R SDH P+ I  D
Sbjct: 741 FKTPRQQDSLYNAEPYRASDHDPVVIGID 769


>gi|107103426|ref|ZP_01367344.1| hypothetical protein PaerPA_01004496 [Pseudomonas aeruginosa PACS2]
          Length = 780

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 100/329 (30%), Gaps = 45/329 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADI 68
           P   +V  ++R+ S+N+      +G           N+ +        +        ADI
Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPSSRGANTAEEFQRQKAKIVAAILASKADI 505

Query: 69  VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121
           V L E+ +      +A+A +       +         +  R    +++I   +  R   V
Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 565

Query: 122 RV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175
           R     +         F    NR  +    +    G+++ +   HLKS    C  D    
Sbjct: 566 RTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 625

Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
               +C+   ++ AQ L DW+            +I GD N        N      I    
Sbjct: 626 DGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRSAG 680

Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
                 ++  +    +         +D+ + + +  + +       I  +E  +      
Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 740

Query: 290 ---------------KRLSDHCPISIDYD 303
                           R SDH P+ I  D
Sbjct: 741 FKTPRQQDSLYNAEPYRASDHDPVVIGID 769


>gi|86604847|ref|YP_473610.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus
           sp. JA-3-3Ab]
 gi|86553389|gb|ABC98347.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus
           sp. JA-3-3Ab]
          Length = 635

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 99/330 (30%), Gaps = 51/330 (15%)

Query: 16  CTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSD-------YTLLRQYAKNLDAD 67
              +V   +++ S+N+ N  +    +    NS  R   +          + +  + +DAD
Sbjct: 106 TPPAVGGSLKVASFNLFNYFNTFGNICFPNNSECRGARNAAEFTRQRDKIIEAIRRMDAD 165

Query: 68  IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNV 121
           IV L E+ +      +++  +       +   T   ++    +   + I      +   V
Sbjct: 166 IVGLNELENDGYGPNSSIQDLVNGLNQVMGPGTYAFVDVGVANLGGDAITNGFIYKPATV 225

Query: 122 RVLQQSYPLLGAKDSFSRAGN----RRAVELLV--EINGKKIWVLDIHLKSFCFLDSLEN 175
            +   + P        ++  +    R  + +    + N     V+  HLKS        +
Sbjct: 226 EIAPGTNPAFLDTGELTQDPSLRRHRPPLAVTFRQKSNNAIFTVVVNHLKSKGSPCDPVD 285

Query: 176 TYSPSCS---LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                 +      + AQ + +W++      +    +I GD N             K ++ 
Sbjct: 286 NDPFQGNCNGNRRRAAQEILNWLSTNPTGSTDPDVLIIGDLNAYAKEDPI-----KVLEE 340

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289
                 F         +         +D+ + + +    +   +   I  +E        
Sbjct: 341 GG----FTNLNGPNSYSFSFQGQWGSLDHALANASLRPQVTGSAKWHINADEPVSLDYTT 396

Query: 290 ----------------KRLSDHCPISIDYD 303
                            R SDH P+ +  +
Sbjct: 397 SFKSASQQSLFYAPDPFRSSDHDPVIVGLN 426


>gi|309780946|ref|ZP_07675685.1| extracellular ribonuclease/nuclease fusion protein [Ralstonia sp.
           5_7_47FAA]
 gi|308920249|gb|EFP65907.1| extracellular ribonuclease/nuclease fusion protein [Ralstonia sp.
           5_7_47FAA]
          Length = 738

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 84/319 (26%), Gaps = 47/319 (14%)

Query: 20  VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               VR+ S+N+ N  +     + + +   R              +    + L+AD+V L
Sbjct: 374 AQADVRVASFNVLNYFNGDGKGAGFDDPANRGAKTQAEFERQEAKIVAAIRELNADVVGL 433

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPL 130
            E+ +         +       +  R ++        + I  AI    + V       P+
Sbjct: 434 MEIENDGYGELSAIRRLTTQLGADWRYVDPGIPKLGGDAITVAIIYNGRTVE------PV 487

Query: 131 LGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS-FCFLDSLENTYSPSCS----- 182
                      NR+ +          +   V+  HLKS  C   + ++            
Sbjct: 488 GTPATLAIDDKNRQPLARSFRRIGGTQNFTVVVNHLKSKGCSGATGKDADQGDGQSCWNP 547

Query: 183 LLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
              + A  + DW+      +     ++ GD N                          K 
Sbjct: 548 TRVRAAGLIADWLATSPTGVADIGKLLIGDLNSYAKEDPI-----VLFADKGYADMVAKF 602

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------ 288
                 +         ID+ +      + +       I  +E                  
Sbjct: 603 VGKDAYSYVYGGEAGYIDHALATPGLAERVRAVHEWHINADEPIALEYSFAYKSAEQQQT 662

Query: 289 -----GKRLSDHCPISIDY 302
                  R SDH P+ +D 
Sbjct: 663 FYAPDAYRSSDHDPVLVDL 681


>gi|167829209|ref|ZP_02460680.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 9]
          Length = 624

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYDEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  S 
Sbjct: 468 AAAKIADWLARNPTGTPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 582

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 583 DAYRSSDHDPVLIDI 597


>gi|307316912|ref|ZP_07596354.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83]
 gi|306897534|gb|EFN28278.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83]
          Length = 261

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 83/284 (29%), Gaps = 49/284 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++R +++N+++    +              D   +         D++ LQE+    A  
Sbjct: 19  QRIRFLTYNVHSCFGTDR-----------RLDPARIAAVIAECQPDVIALQEVDVGRART 67

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +      +       H       D     AV       L ++ PL  +        
Sbjct: 68  GGIDQAHMIATHLNMEAEFHP-ALHLEDEKYGDAVLTALPMRLIKAAPLPSSG------E 120

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199
            R A+ + +++   K+ V+  HL                 +   +QA  L    W+    
Sbjct: 121 PRGALWVEIDVAAVKLQVIVTHLGLRG-------------AERLRQATALLGPGWLGGMA 167

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           E     V+AGD N             + +     L               +    + ID+
Sbjct: 168 EGDAHVVLAGDLNAT-GRSTAYRLLARQLSDAQLLTGV-----KPRPTFPSRLPLLRIDH 221

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++ +     +   S            +  +  SDH P+  + D
Sbjct: 222 VLVGKG----VEVASCRVH------GSTLARSASDHLPLLAELD 255


>gi|167615248|ref|ZP_02383883.1| extracellular nuclease, putative [Burkholderia thailandensis Bt4]
          Length = 622

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R              +    K LDAD++ L E+ 
Sbjct: 292 LRVASFNVLNYFNSDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 351

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  S   +   S R   + I  A+    + V+      P+  A 
Sbjct: 352 NDGYGPLSAVRQLAAKLGDSWRVVDPGSARLGGDAIAVALIYDSRKVK------PVGNAA 405

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +    +     + + V   HLKS    ++  +            +  S+
Sbjct: 406 TLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCWNATRSR 465

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  + 
Sbjct: 466 AAAKVADWLARNPTGAHSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAP 520

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 521 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 580

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 581 DAYRSSDHDPVLIDI 595


>gi|313109336|ref|ZP_07795300.1| putative extracellular nuclease [Pseudomonas aeruginosa 39016]
 gi|310881802|gb|EFQ40396.1| putative extracellular nuclease [Pseudomonas aeruginosa 39016]
          Length = 780

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 99/329 (30%), Gaps = 45/329 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQYAKNLDADI 68
           P   +V  ++R+ S+N+      +G      +       +        +        ADI
Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTVEEFQRQKAKIVAAILASKADI 505

Query: 69  VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121
           V L E+ +      +A+A +       +         +  R    +++I   +  R   V
Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 565

Query: 122 RV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175
           R     +         F    NR  +    +    G+++ +   HLKS    C  D    
Sbjct: 566 RTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 625

Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
               +C+   ++ AQ L DW+            +I GD N        N      I    
Sbjct: 626 DGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRGAG 680

Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
                 ++  +    +         +D+ + + +  + +       I  +E  +      
Sbjct: 681 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 740

Query: 290 ---------------KRLSDHCPISIDYD 303
                           R SDH P+ I  D
Sbjct: 741 FKTPRQQDSLYNAEPYRASDHDPVVIGID 769


>gi|154490836|ref|ZP_02030777.1| hypothetical protein PARMER_00753 [Parabacteroides merdae ATCC
           43184]
 gi|154088584|gb|EDN87628.1| hypothetical protein PARMER_00753 [Parabacteroides merdae ATCC
           43184]
          Length = 357

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/361 (11%), Positives = 93/361 (25%), Gaps = 67/361 (18%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKN-----------SVK 48
           M R   +      +    S  Q   R++S+N+  L + +   L  +           +  
Sbjct: 1   MARTLTMTFFILTLFSLPSQGQTDFRVMSYNVENLFDTKDDPLTADNDFLPSGNRHWTSG 60

Query: 49  RTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
           R       L +            ++ L E+ + + + ++         +    +   +  
Sbjct: 61  RFYHKLQQLAKVITAAGEWSTPALIGLCEVENDSVLVRLLDFTPLRRQHYRYCM---THG 117

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIH 163
                I+ A   ++   R    +   +           R  + +  + I G +I V   H
Sbjct: 118 QDTRGINVAFLYQRDKFRYQGHTEHPVRFTRKQH-KHTRNILHVWGDVITGDRIDVFVCH 176

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
             S    +          +      + L D I          +I GDFN   +     + 
Sbjct: 177 FPSRYGGEKESEPDRLDAART---LRTLCDSI-HNLRPAPHILIMGDFNDTPDDTSIREI 232

Query: 224 FWKT------IDPND---------------SLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
                     +  +                    F K +     ++K       +D  ++
Sbjct: 233 LDAHPVQVPCLSGSGSMPMKPRTNAYPSLLLYNLFAKNRSVPPGSHKYQGEWSQLDQIIL 292

Query: 263 DQNAYK-----FLIQESFSEI----------------LYNEDDIKSRGKRLSDHCPISID 301
             +         LI  S                     +            SDH P+ +D
Sbjct: 293 SSSLTDTTSQMQLIPGSARIFSPSFLLIKDKTWRGERPFRTYYGFKYEGGYSDHLPLIVD 352

Query: 302 Y 302
           +
Sbjct: 353 F 353


>gi|319763690|ref|YP_004127627.1| exodeoxyribonuclease iii xth [Alicycliphilus denitrificans BC]
 gi|317118251|gb|ADV00740.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans BC]
          Length = 258

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 80/301 (26%), Gaps = 70/301 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L +WNIN+LS                     +  +      D + LQE+       K+  
Sbjct: 3   LATWNINSLS----------------VRLPQVLAWLAANPVDAIGLQEL-------KLVD 39

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +      +       +         +  +A+  +                        R 
Sbjct: 40  E---KFPHDAFEAAGYHAVCFGQKTYNGVAIVSRTPPRDVVRNI------PGHDDEQARV 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   +++ G  + +++ +  +     + +  Y        Q    L DW+  +  +    
Sbjct: 91  IAATLDVEGGPLRLVNCYFVNGQAPGTDKFAYK------LQWLAALHDWLRAELAAHPRL 144

Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+ GDFN       + D                 ++ +        F +  +    +   
Sbjct: 145 VLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERQHFRQLLELGLTDAF-RMFEQPEKSYSW 203

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           ID+ ++ +     +            D    +  + SDH P+   
Sbjct: 204 WDYRQLGFQKNRGLRIDHILVSEALRAGVTAC-------RIDRAPRKNPQPSDHAPVVAT 256

Query: 302 Y 302
            
Sbjct: 257 L 257


>gi|223939432|ref|ZP_03631310.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514]
 gi|223891924|gb|EEF58407.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514]
          Length = 330

 Score =  108 bits (269), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 102/321 (31%), Gaps = 39/321 (12%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  V+   +  +      A   R+  +N+    +++  +       +T +    +R+  
Sbjct: 26  LRCIVIISAWLFLHSPLFAADTFRVACYNVENYLDEKTGT----RPLKTDAAKAKIRESI 81

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
             L  D++ L+EMGS NA+ ++          S    + + +  +  D +  +AV  K  
Sbjct: 82  CALKPDVIALEEMGSTNALLELQGSLK-----SEGLDLPYWEHVAGFDTNIHVAVLSKFP 136

Query: 122 RVLQQSYPLLGAKDSFSRAG-NRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179
                 +       +  R   +R   E+ ++        ++  HLKS       +   + 
Sbjct: 137 FTAHHPHTNDAFLLNGRRFQVSRGFAEVDIQPTTNYSFTLIAAHLKSR-----RQIAAAD 191

Query: 180 SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFW----------KT 227
              L  ++A+ L++ I  +      +  ++ GDFN   +                   + 
Sbjct: 192 ESELRLEEAKVLREIIDARLAANPNLNLIVLGDFNDLHDSAPIKTILGGRSKKGLIDTRP 251

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNE 282
            + N         + +  N               +DY ++     +            + 
Sbjct: 252 AERNGDDHSHTDRRVASRNITWTHFYAKEDTYSRVDYILLSHGIARE------WNTNESY 305

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
                     SDH P+   + 
Sbjct: 306 VLSIPNWGTGSDHRPLVASFT 326


>gi|167647627|ref|YP_001685290.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
 gi|167350057|gb|ABZ72792.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
          Length = 1052

 Score =  108 bits (269), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 79/312 (25%), Gaps = 48/312 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFL 71
                + A K+ + ++N+  L   +             + +  +     N     DI+ +
Sbjct: 583 FTNLTAAADKLTIATYNLENLDPTDSA-----------AKFQSIAFDIANNLHHPDIIGV 631

Query: 72  QEMGSYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           QE+   +                            +        +   +  +   +I   
Sbjct: 632 QEIQDADGAGSGSNLSGAATAQVLINAIVAAGGPRYTYVEVAPTVAGSTGGEPGGNIRNG 691

Query: 114 IAV---RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
                 R + V    +        +  +   +R  +      N + I  + +H  S    
Sbjct: 692 FLYDASRVQYVDGSARLVLDTDLTNGNAFNNSRNPLAADFVFNDETITAVSVHSTSRGGS 751

Query: 171 DSLENTYSPS----CSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDF 224
             L     P+     +  + QA  L  ++   +         + GDFN            
Sbjct: 752 GPLFGADQPAIVAGDASRTAQAVELTKFVNTLEATNPDHHVAVMGDFNGYYFET----AL 807

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                  +              + K        D  ++ ++        S  +I++   +
Sbjct: 808 AGLEANANLYNLAKSLPVEERYSYKFEGYAQLFDNILVSKDLQ----SVSEFDIVHLNSE 863

Query: 285 IKSRGKRLSDHC 296
                +  SDH 
Sbjct: 864 QLPSAQVSSDHD 875


>gi|120553299|ref|YP_957650.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8]
 gi|120323148|gb|ABM17463.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8]
          Length = 826

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 84/314 (26%), Gaps = 38/314 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             + + S+N+      +G+          ++ +        L      LDADI+ L E+ 
Sbjct: 456 GNLVVASFNVLNFFNGDGMGGGFPTARGADNPEELARQTEKLVSALVALDADIIGLMEIE 515

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +                 S  + ++        +DI   +  R   V ++  +  L  A 
Sbjct: 516 NDGYGQTSAIAELAGALGSEWQWVDPGLAQLGNDDIAVGLLYRADRVEIVGTAATLSAAP 575

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCS-----LLSQQA 188
                     A    ++ +   + +   H KS  C      N            + +Q A
Sbjct: 576 FDQLNRQP-LAQTFRLKDSDDGVTIAVNHFKSKGCGSAEGSNADQNDGQGCWNPVRTQAA 634

Query: 189 QWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           Q L  W+            +I GD N             + +               +  
Sbjct: 635 QALASWLADDATGTGEPDVLIIGDLNAYAQEDPI-----RALASAGYTDLLATYVGEQAY 689

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------------- 289
           +         +D+ + +      +   +   I  +E                        
Sbjct: 690 SYVFYGQAGYLDHALANTALAGKIADTTVWPINADEPRALDYNTEFKTPEQQASFYAPDA 749

Query: 290 KRLSDHCPISIDYD 303
            R SDH P+ +  +
Sbjct: 750 YRASDHDPVIVALN 763


>gi|284039823|ref|YP_003389753.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
 gi|283819116|gb|ADB40954.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
          Length = 266

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 94/311 (30%), Gaps = 59/311 (18%)

Query: 3   RKYVLALVFFLVPCTASV----------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
            K+V  LVF L+   +            A+ ++++++NI+  +              +  
Sbjct: 1   MKFVHNLVFLLISLVSYAHEGPSDVAKKAKSLKVMTYNIHHCNPPSAG---------SKI 51

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           D   + +       D+V LQE+      +         +   T      SK   +     
Sbjct: 52  DVEAIARVITAEKPDLVALQEVDVNTERSGKGLNQAKELARLTGMNFFFSKAIDHQGGDY 111

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLD 171
            +AV  +   +    + L            R    + VE   GK++     HL       
Sbjct: 112 GVAVLSRFPILDSTRFILPIDPTIGG--ETRTIAAITVEPTKGKRMIFASTHLDLKEPN- 168

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                          Q++ +   I     + +P ++AGDFN + +         K I   
Sbjct: 169 ------------RLTQSELI---IRHFGATDLPVILAGDFNAQTDS--------KVIQLF 205

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           D       +  +     KN      ID+ ++ Q            +  Y           
Sbjct: 206 DQTFVRSCQSCAPTIPVKNPNR--AIDFVMVKQGGSLKSTSTRVVDEQY----------- 252

Query: 292 LSDHCPISIDY 302
            SDH P+ ++ 
Sbjct: 253 ASDHLPVVVEL 263


>gi|218264352|ref|ZP_03478209.1| hypothetical protein PRABACTJOHN_03900 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222083|gb|EEC94733.1| hypothetical protein PRABACTJOHN_03900 [Parabacteroides johnsonii
           DSM 18315]
          Length = 287

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 78/311 (25%), Gaps = 37/311 (11%)

Query: 2   IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           ++K +L L   L       A     ++ ++S+NI   ++ +G +              L 
Sbjct: 1   MKKVLLYLFTLLFSTNVVFAKHLDNEMNVMSFNIRMSTKSDGAN-------WWEYRKDLA 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               K  D D+   QE+        +     +                S           
Sbjct: 54  ANVIKFYDVDMFGAQEVLHNQLTDLLDRLPDYGYVGVGREDGKTKGEYSPIFYRKDRFSV 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            K+             K  +  A  R A   + +    +     ++          +   
Sbjct: 114 VKSGNFWLAEDMNAVGKKGWDAACERVATWAVFKDKESEKEFFFLNTHL---DHMGQIAR 170

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIR 236
               SL+ +Q + L           +P ++ GDFN              K +        
Sbjct: 171 HEGASLVLEQVKLLA--------GNLPVIVTGDFNAVPTDDPIKVLTDEKDLRHLTHTRT 222

Query: 237 FPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                        +        ++ IDY  +  N            + +           
Sbjct: 223 LAPLCYGPEWTFHDYGRVPLDERVWIDYIFIKGN---------IKVLRHGVLTESLGNLY 273

Query: 292 LSDHCPISIDY 302
            SDHCP+    
Sbjct: 274 PSDHCPVISRL 284


>gi|150004910|ref|YP_001299654.1| hypothetical protein BVU_2373 [Bacteroides vulgatus ATCC 8482]
 gi|149933334|gb|ABR40032.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 336

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/341 (11%), Positives = 97/341 (28%), Gaps = 47/341 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50
           ++K +L L    +       +  R++ +N+  L + +  +L  +           +  R 
Sbjct: 1   MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +           D+V L E+ + + +  +   +          + +      
Sbjct: 61  HDKLAKIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSPDE-- 118

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165
              I  A+  ++ + ++L +   L        R   R  + ++ ++ +G  + V   H+ 
Sbjct: 119 -RGIDVALLYQRGSFKLLGK-NSLSVPYKEMERRPTRDILHVMGQVASGDTLDVFVCHMP 176

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
           S    +     Y     L + Q   +              +I GDFN             
Sbjct: 177 SRAGGEEKSEPYR----LFTAQILNIAADSIINLRQHPNVMIMGDFNDYPTNNSIAKVLG 232

Query: 226 KTIDPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-------QNAYKFLIQESF- 275
                 +  +   +      +    +       +D  ++         +      +    
Sbjct: 233 AVAPKGEVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSGFLLQGHDSMRTSYDKAQIL 292

Query: 276 -------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                         +I       K      SDH P+ +D++
Sbjct: 293 KYPFLLEEDEKYGGDIPSRTYWGKKYHGGYSDHLPVCVDFE 333


>gi|159028952|emb|CAO87413.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1628

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 92/312 (29%), Gaps = 47/312 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A K+ + S+N+  L+  E        ++R       +    +    DI+ LQE+   N  
Sbjct: 475 ADKLTIASYNVENLNPTES---NPGGLERFGVLANQIVNNLRA--PDIIGLQEIQDNNGP 529

Query: 79  ----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                                    T+  F + + +          +I          V 
Sbjct: 530 INDGTVAADLTYQALIDAITAAGGPTYQ-FLNIDPVDGRDGGAPGTNIRVGYLYNPDRVS 588

Query: 123 VLQQSY-----PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            ++ S      P+    +  +   +R+ +      NG+++ V++ HL S    + L    
Sbjct: 589 FVEGSLRRITDPIATPDNDGAFTNSRKPLVATFTFNGQEVTVINNHLTSRRGGNGLFGNV 648

Query: 178 SP----SCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
            P       + + QA  +   +      +     V+ GD N       + ++F + +   
Sbjct: 649 QPPNIGGADVRANQATVINSEVNAILADDPNANVVVLGDLNGF-----DFEEFQQILSGG 703

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                                N   +D+ ++  N       +     +           +
Sbjct: 704 VLTNLSQTLDVRDRATFNFQGNSQALDHILITNNLASKAEYDIVRVNV-------DFLDQ 756

Query: 292 LSDHCPISIDYD 303
            +DH PI    +
Sbjct: 757 PADHEPILATLN 768


>gi|16263840|ref|NP_436632.1| hypothetical protein SM_b20092 [Sinorhizobium meliloti 1021]
 gi|15139964|emb|CAC48492.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021]
          Length = 252

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 82/284 (28%), Gaps = 49/284 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++R +++N+++    +              D   +         D++ LQE+    A  
Sbjct: 10  QRIRFLTYNVHSCFGTDR-----------RLDPARIAAVIAECQPDVIALQEVDVGRART 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +      +       H       D     AV       L ++ PL  +        
Sbjct: 59  GGIDQAHMIATHLNMEAEFHP-ALHLEDEKYGDAVLTALPMRLIKAAPLPSSS------E 111

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199
            R A+ + +++   K+ V+  HL                 +   +QA  L    W+    
Sbjct: 112 PRGALWVEIDVAAVKLQVIVTHLGLRG-------------AERLRQATALLGPGWLGGMA 158

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +     V+AGD N             + +     L               +    + ID+
Sbjct: 159 QGDAHVVLAGDLNAT-GRSTAYRLLARQLSDAQLLTGV-----KPRPTFPSRLPLLRIDH 212

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++ +         S            +  +  SDH P+  + D
Sbjct: 213 VLVGKGIEV----ASCRVH------GSTLARSASDHLPLLAELD 246


>gi|313204713|ref|YP_004043370.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
 gi|312444029|gb|ADQ80385.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
          Length = 289

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 93/311 (29%), Gaps = 37/311 (11%)

Query: 1   MIRKYVLALVFFLV---PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M ++ VL LV  +          A K+ + ++NI   +  +         +   +    +
Sbjct: 1   MTKRNVLILVVAMCWSHLFAGDNAGKLTIATYNIRLQTPVDSG------ARSWVNRKADV 54

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER--LINHSKRDSNNDIHTAIA 115
            +  K  D DI  +QE+G+ N  A +        ++   R   +            T   
Sbjct: 55  ARVIKKYDFDIFGVQEVGNKNQEADLKALIPDYTYFGKGRDNQVGTDGEQIGLFYKTKRF 114

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           + K+         P + +K  +  A  R  V +  +    K            F      
Sbjct: 115 LAKEKGSFFLSETPEVMSK-GWDAAYRRMCVWIRFQDAETKSEFFVFCSH---FDHMGVK 170

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               S  L+ QQ + +            P +  GD N   +          T D +  + 
Sbjct: 171 ARVESARLIEQQVKKIAA--------GKPVLFLGDLNTAPDETDMYKILHATFDDSREIS 222

Query: 236 RFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             P         N ++          IDY        K +   S+  I     D  S   
Sbjct: 223 AKPAIGSVGTFNNYDVSKMMLPVSERIDYIFC-----KKIKVFSYRVIS----DRFSEKT 273

Query: 291 RLSDHCPISID 301
             SDH P+ I+
Sbjct: 274 YPSDHFPVMIE 284


>gi|119774614|ref|YP_927354.1| endonuclease/exonuclease/phosphatase [Shewanella amazonensis SB2B]
 gi|119767114|gb|ABL99684.1| endonuclease/exonuclease/phosphatase [Shewanella amazonensis SB2B]
          Length = 947

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 96/328 (29%), Gaps = 51/328 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADIVFLQEM 74
           A  +++ S+N+      +G+     + +              +    K +DADI+ L E+
Sbjct: 461 AGNLKVASFNVLNYFNGDGLGGGFPTARGANTAVEFERQRAKIISAMKAIDADILGLMEI 520

Query: 75  GS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVL---- 124
            +      +A+A +               I+ +      D I   I  R   V       
Sbjct: 521 ENDGFGSESAIADLVNGLNAATEAGRYGYIDPAVPAIGTDAISVGIIYRTDKVTPEGAAA 580

Query: 125 ----QQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL-----DSL 173
                 S      K  F+   NR  +          + + V   H KS         D  
Sbjct: 581 ILDSSNSAVDEDGKVLFNDQKNRPMLAQAFRHLETDEPVVVAVNHFKSKGSDCVAENDPD 640

Query: 174 ENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                 +C+   ++ A+ + +++   + +  P ++ GD N               ++   
Sbjct: 641 LGDGQGNCNLTRTRAAKAVGEFLNT-EFADAPVLVIGDLNSYAMENP-----LTALNEAG 694

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--- 289
               F         +         +D+ + +    + ++  +   I  +E  I       
Sbjct: 695 LTELFAHLGKESAYSYVFSGESGQLDHALANVALLEKVVDVTEWHINTDEPRILDYNVEF 754

Query: 290 --------------KRLSDHCPISIDYD 303
                          R SDH P+ I  +
Sbjct: 755 KSAGQVESLYSMDAYRSSDHDPVVISLE 782


>gi|121605670|ref|YP_982999.1| exodeoxyribonuclease III Xth [Polaromonas naphthalenivorans CJ2]
 gi|120594639|gb|ABM38078.1| Exodeoxyribonuclease III [Polaromonas naphthalenivorans CJ2]
          Length = 260

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 91/304 (29%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE+   +     
Sbjct: 1   MKIATWNVNSLT----------------VRLPQVLDWLAANPVDVLCLQELKLSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +         +  +A+  +                 F+   +R
Sbjct: 41  ------KFPLQELEAAGYQSAVFGQKTYNGVAILSRTPARNIVKNI-----TGFTDEQSR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +++   ++ V++ +  +     S +  Y        +  + L++W+ ++     
Sbjct: 90  -VIAATLDMPTGEVRVVNGYFVNGQSPGSEKFEYK------MKWLESLRNWLREELAEHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN   +   + D                 ++ +     L    +  D    + 
Sbjct: 143 NLVLLGDFNITADDRDSYDPEGLRETIHHTSEERQHFQALVKLG-LNDAFRMFDQPEKSY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++ +     +            D +  + +R SDH P+ 
Sbjct: 202 SWWDYREMAFRRNRGLRIDHILVSEALKPLVRSCVI-------DKLPRKNERPSDHVPVV 254

Query: 300 IDYD 303
           ++ D
Sbjct: 255 LELD 258


>gi|269125611|ref|YP_003298981.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
 gi|268310569|gb|ACY96943.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
          Length = 573

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 86/307 (28%), Gaps = 31/307 (10%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                    V++ S+N        G       ++R       L    K +DAD+V L E+
Sbjct: 270 APGPVGPATVKVASFNTLNWFTTVGGRGATTPLER-ERQLAKLVAALKGMDADVVGLMEV 328

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
            +    AV  +  +    +       I H      + IH A+  R   VR      P+  
Sbjct: 329 ENNGDAAVKALVDRLNAAVGAGAYSWIRHPGPG-GDAIHVALIYRPGRVR------PVGP 381

Query: 133 AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           A+ +      R  +         G    V+  HLKS     +               A+ 
Sbjct: 382 ARTAADAVFERPPLAQTFRHAGGGTPFTVIVGHLKSKRCDGASGPDADQGDGQGCYNARR 441

Query: 191 LKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           ++      + +      ++ GD N               +               R  ++
Sbjct: 442 VRQARALAELAAAVPHPLVIGDLNSYGREDPIKTLAASGLAGQTERFVP----AGRRYSH 497

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------KRLSDH 295
                   +D+ +      +++   +   I  +E  I                  R SDH
Sbjct: 498 VFDGQAGELDHVLAPPALARWITGVTIWHINADEPPIVDYNTEDNPPRLYRPDAYRSSDH 557

Query: 296 CPISIDY 302
            P+ +  
Sbjct: 558 DPVIVGL 564


>gi|150008872|ref|YP_001303615.1| hypothetical protein BDI_2262 [Parabacteroides distasonis ATCC
           8503]
 gi|256841134|ref|ZP_05546641.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|149937296|gb|ABR43993.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|256736977|gb|EEU50304.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 287

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 96/313 (30%), Gaps = 41/313 (13%)

Query: 2   IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           +++ +L L+  L       A    +K+ ++S+NI   +  +  + W     +   D+   
Sbjct: 1   MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQW-----KFRRDFA-- 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               K  +AD+   QE+ +      +     +                +           
Sbjct: 54  ADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175
           +K+             K  +  A  R A   +++    GKK + L+ HL         + 
Sbjct: 114 EKSGNFWLAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPN 231
                 SL+ +QA+ L           +P ++ GDFN   +             + +  +
Sbjct: 169 ARHEGASLVLEQAKKL--------SENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHS 220

Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            ++  F    +   +         +  IDY  +  N            + +         
Sbjct: 221 RTIAGFIYGPEWTFHDFGKIPYDKREWIDYIFVKGN---------IKVLRHGVLTETLNN 271

Query: 290 KRLSDHCPISIDY 302
              SDHCP+    
Sbjct: 272 LFPSDHCPVISTL 284


>gi|160900429|ref|YP_001566011.1| exodeoxyribonuclease III [Delftia acidovorans SPH-1]
 gi|160366013|gb|ABX37626.1| exodeoxyribonuclease III [Delftia acidovorans SPH-1]
          Length = 258

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 85/301 (28%), Gaps = 70/301 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N+LS                     +  + +    D + LQE+   +       
Sbjct: 3   IATWNVNSLS----------------VRLPQVLAWLQANPVDALALQELKLTDD------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                      +   +         +  +A   +          + G  D  +R      
Sbjct: 41  ----KFPLQALQEAGYHAVSHGQKTYNGVAWLTRTPVRDVVRN-IPGLDDEQAR-----I 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   ++  G  + +++ +  +     + +  Y        +  Q L+DW+  +       
Sbjct: 91  IAATLDAEGGPVRLINGYFVNGQAPGTDKFAYK------MRWLQALQDWVKSEMAIHPRL 144

Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+ GDFN       + D                 ++ +        F +  D    +   
Sbjct: 145 VLVGDFNVAPEDRDSYDPIGLKDTIHHTVEERTHFQALLQLGLTDAF-RMFDQPEKSYSW 203

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ++          ID+ ++ +     +   S        D    +  + SDH P+ + 
Sbjct: 204 WDYRMLGFQKNRGLRIDHILVSEALRPSVSACSV-------DRAPRKNPQPSDHAPVVVT 256

Query: 302 Y 302
            
Sbjct: 257 L 257


>gi|167584771|ref|ZP_02377159.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu]
          Length = 572

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R    Y         +    K LDAD++ L E+ 
Sbjct: 263 LRVASFNVLNYFNGNGLGGGFDDPANRGAKTYQEFVRQDAKIVSALKALDADVIGLMEIQ 322

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +      +   + R   + I  A+    + V       P+  A 
Sbjct: 323 NNGYGELSAVRQLAAKLGGHWRVVDPGTARLGGDAIAVALIYDSRKVE------PVGRAA 376

Query: 135 DSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +       G K  + V+  HLKS    D+  +            +  ++
Sbjct: 377 TLAIDDKNRQPLAQTFRRVGGKHALTVVVNHLKSKNCPDATSDDLDQGDGQGCWNATRTR 436

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  L DW+       S    ++ GDFN   +         + ++         +   + 
Sbjct: 437 AAARLADWLAGTPTGASTQGVLLIGDFNSYTHEDPI-----RLLESRGYRNLVSRWIGAN 491

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------------- 288
             +         +D+ +        +       I  +E                      
Sbjct: 492 AYSYVYNGEAGYLDHALASLPLAAHVKAVHEWHINADEPVALQYTLAYKSAEQQRTWYAP 551

Query: 289 -GKRLSDHCPISIDY 302
              R SDH P+ +D 
Sbjct: 552 DAYRSSDHDPVLVDI 566


>gi|294778476|ref|ZP_06743899.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|294447738|gb|EFG16315.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
          Length = 336

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/341 (11%), Positives = 100/341 (29%), Gaps = 47/341 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50
           ++K +L L    +       +  R++ +N+  L + +  +L  +           +  R 
Sbjct: 1   MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +           D+V L E+ + + +  +   +          + +      
Sbjct: 61  HDKLAKIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSPDE-- 118

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165
              I  A+  ++ + ++L +   L        R   R  + ++ ++ +G  + V   H+ 
Sbjct: 119 -RGIDVALLYQRGSFKLLGK-NSLSVPYKEMERRPTRDILHVMGQVASGDTLDVFVCHMP 176

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
           S    +     Y     L + Q   +              +I GDFN             
Sbjct: 177 SRAGGEEKSEPYR----LFTAQILNIAADSIMNLRQHPNVMIMGDFNDYPTNNSIAKVLG 232

Query: 226 KTIDPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------------FLI 271
                 +  +   +      +    +       +D  ++     +             ++
Sbjct: 233 AVAPKGEVQAKKLYNLMDGRKEGTYRYRGEWGILDQLIVSGFLLQGHDGICTSYDKAQIL 292

Query: 272 QESF---------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  F          +I       K      SDH P+ +D++
Sbjct: 293 RHPFLLEEDEKYGGDIPSRTYWGKKYHGGYSDHLPVCVDFE 333


>gi|260910352|ref|ZP_05917025.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260635535|gb|EEX53552.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 310

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/317 (9%), Positives = 79/317 (24%), Gaps = 37/317 (11%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           ++ L   L    A+  Q + + S+NI   ++ +     +           ++        
Sbjct: 8   LVLLGAVLCMAFAAFGQTLVVGSYNIRYRNDGD-----EAKGHLWAKRCQVIADQLNYHH 62

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D    QE+        +     +            +   +          +  +     
Sbjct: 63  PDAFGAQEVLKGQLDDMLRALPDYDYVGVGRDDGREAGEYAPIFYRRDRLDKLGDGYFWL 122

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                      +  A  R       ++  +GK     ++H                    
Sbjct: 123 SPT-YTKPSLGWDAACIRICTWAKFKVRESGKVFLFFNLHTDHVG------------VKA 169

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             + A+ +   I       +P V+ GDFN                  +  ++   +  ++
Sbjct: 170 RRESAKLVMKAIEGLGGKDMPVVLTGDFNVDQTDETYAIFTANARLNDAYVVAKHRFAEN 229

Query: 244 RCNANKNL--RNKIPIDYFVMDQNAYKFL---------------IQESFSEILYNEDDIK 286
               + N   +    ID+  +                         +   +     D  +
Sbjct: 230 GTFNSFNPTLKTTSRIDHIFVSPRFSVARYAVLPNFYWTEEPATKSQKGQDAPQQIDLKQ 289

Query: 287 SRGKRLSDHCPISIDYD 303
            + +  SDH P+  + +
Sbjct: 290 HQLRTASDHYPVFAEIN 306


>gi|87306888|ref|ZP_01089034.1| hypothetical protein DSM3645_00505 [Blastopirellula marina DSM
           3645]
 gi|87290261|gb|EAQ82149.1| hypothetical protein DSM3645_00505 [Blastopirellula marina DSM
           3645]
          Length = 253

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 79/280 (28%), Gaps = 32/280 (11%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +S+NI   S ++G + W            L+ +  +  D+D++  QE   +         
Sbjct: 1   MSFNIRYGSAKDGENHWNIRKP-------LVIETIERYDSDLLGTQECLPFQEAYLREKL 53

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             +  +  +      +  +       +         +     P      S+  +  R A 
Sbjct: 54  PQYDCYAVSREGKGTAGEECAIFYRKSRFELLDQGSIALSETPEKIGSVSWDSSLPRIAS 113

Query: 147 ELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            + +    +G      + H     F      + + +  LL  Q +              P
Sbjct: 114 WVKLRDKQSGHAFTFWNTH-----FDHRGPKSRTEAAKLLVDQMKA--------TTESGP 160

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            V+ GDFN        +      +  +       +      N   +      ID+    Q
Sbjct: 161 VVLTGDFNADAGSSP-HQALATYLRDSWK-SAKWEGSAWTFNGWSDKSKGARIDWIFHSQ 218

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            +     +G+  SDHCP++    F
Sbjct: 219 GFQA--------TDSTIDRWKSDQGRYPSDHCPVTTTLTF 250


>gi|168700428|ref|ZP_02732705.1| probable secreted protein [Gemmata obscuriglobus UQM 2246]
          Length = 263

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 80/307 (26%), Gaps = 51/307 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           +R   + ++  L     +  +     +R++++NI+     +G             D   +
Sbjct: 1   MRAIAVTVLLGLAGLVPADDKPERNVLRVLTYNIHHGEGTDG-----------KLDLARI 49

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            +  K    D+V LQE+           +       +        K          +AV 
Sbjct: 50  AEVIKAAKPDVVALQEVDRNTTRTGKVDQAAELAKLTG-LNAEFGKAIDLQGGGYGLAVL 108

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +      + + L G +    R   R  +++ VE  G     L          D      
Sbjct: 109 SRFPLKGAKVHSLPGKE----RQEARIVLQVTVE-PGGPFPALTFLNTHLQHDDGP---- 159

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                   +Q   + +       +   FV+AGD N                         
Sbjct: 160 -----TREKQIAKIDELFGTAAGA---FVLAGDLNAAPASAPIKALAKN-------WAFA 204

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            +          +   +  IDY +              + I              SDH P
Sbjct: 205 TEPGRKGLLTIPSDTPRQQIDYILFRP--ADRFRVAEANVIEEKV---------ASDHRP 253

Query: 298 ISIDYDF 304
           +    ++
Sbjct: 254 VFALVEW 260


>gi|332141756|ref|YP_004427494.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas
            macleodii str. 'Deep ecotype']
 gi|327551778|gb|AEA98496.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas
            macleodii str. 'Deep ecotype']
          Length = 1346

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 88/315 (27%), Gaps = 38/315 (12%)

Query: 22   QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY--AKNLDADIVFLQEMGS--- 76
              V++ S+N+            + +      +   ++       ++AD++ L E+ +   
Sbjct: 974  GDVKVASFNVLNYFNGPEFPTPRGADSVAEFERQKVKTIAAIVAMNADVLGLVEIENDGY 1033

Query: 77   --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               +A+A +       +       +    +   ++I   I  +   V +         A 
Sbjct: 1034 SSESAIATLVDSVNAELGSDEYSYVALESQLGGDEIAVGIIYKPAVVSLQGNPVTSSNAP 1093

Query: 135  DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC------FLDSLENTYSPSCSLLSQQA 188
              +            V  NG+   +   H KS          ++         + L  QA
Sbjct: 1094 FDYGNRQP-LLQSFSVNSNGEDFTLAINHFKSKGSCGSATGNNADLGDGQGCWNELRTQA 1152

Query: 189  QW-LKDWITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               +   + Q  +      ++ GD N               ++                 
Sbjct: 1153 AQGIISLVEQNSDILSDRVIVMGDLNAYAKEEPIL-----ALEEAGYSNLVNFFDGDSAY 1207

Query: 247  ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------------- 289
            +         +D+ +   +  ++++  +   I  +E  +                     
Sbjct: 1208 SYSFGGEMGYLDHALSSPSLTEYVVDATVWHINADEPRVFDYNVEFKSETQLSSYYGADA 1267

Query: 290  KRLSDHCPISIDYDF 304
             R SDH P+ +  +F
Sbjct: 1268 YRSSDHDPVVVVLNF 1282


>gi|269118848|ref|YP_003307025.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
 gi|268612726|gb|ACZ07094.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
          Length = 283

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 102/315 (32%), Gaps = 51/315 (16%)

Query: 2   IRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48
           ++K  ++L+   + C               +   K+R+ ++NI   +             
Sbjct: 1   MKKLFISLILI-LSCFIYGEEKVLYNKVITNSNPKIRVATYNIAAGANN----------- 48

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
               D  L  +  K ++ DI+ +QE+      +    +       +      + K     
Sbjct: 49  -FKVDLKLTAETIKKINPDIIAIQEVDRNTERSGRTDQIKVLSELTG-YNYVYGKTIDFQ 106

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                IAV  K+  V  +   L     D+      R A+   V++ G ++ V  I+    
Sbjct: 107 GGEYGIAVLSKHPIVSNEIIKLPYTNTDTKKEEEPRIALVTKVDVPGFEVPVTFINTHL- 165

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                    +    ++  QQ + + +     +      ++AGDFN  +N +   +     
Sbjct: 166 --------DWHEDPNIRLQQVRTINEVTLDMRGIK---ILAGDFNDTLNSVIGREM---- 210

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
               +       +  +       +  ++ ID   ++      + +         +D    
Sbjct: 211 ----ERYWTTVFDGKTDHRTWPAVNPEVAIDQIFLNNAQVWKVEKVYVPNTGTEKDT--- 263

Query: 288 RGKRLSDHCPISIDY 302
             K +SDH P+ +D 
Sbjct: 264 DWKTVSDHIPVIVDL 278


>gi|239814644|ref|YP_002943554.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
 gi|239801221|gb|ACS18288.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
          Length = 261

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 87/304 (28%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                +    +  +      D++ LQE+   +     
Sbjct: 1   MKIATWNVNSLT----------------ARLQHVLDWLIANPVDVLCLQELKMSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +   +         +  +A+                  D        
Sbjct: 41  ------KFPLDVLKSAGYEAAVFGQKTYNGVAILSLAPMRDVARNIGGFTDDQSR----- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   VE     + +++ +  +     + +  Y           + L++W+  +  +  
Sbjct: 90  -VIAATVETPAGPLRIVNGYFVNGQAPGTDKFEYK------MGWLRALREWLRAEMAAHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN       + D                 +K +     +  F +  +    + 
Sbjct: 143 NLVLLGDFNIAPEDRDSFDPVGLAETIHHTTEEREHFKALLQLGLVDSF-RLFEQPEKSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++ +     +            D +  + ++ SDH P+ 
Sbjct: 202 SWWDYRMLGYQKNRGLRIDHILVSEPLVPRVKGCII-------DRVPRKWEKPSDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 LDLD 258


>gi|332667070|ref|YP_004449858.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332335884|gb|AEE52985.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 1056

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 96/325 (29%), Gaps = 48/325 (14%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQYAKNLDADI 68
           P    +A  +++ ++N+  L   +G      +                +    + +DAD+
Sbjct: 571 PAPPKLAGDLKIATFNLLNLFNGDGNGGGFPTSRGASNLPAFRLQLRKIITAIRRMDADV 630

Query: 69  VFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           + LQE+ +       A+ ++       +   T  L +   R   + I   I  +   V  
Sbjct: 631 LGLQEVENDGFGPRTAIQELVDSLNAVLGAGTYALSSPGVRFGADQIVVGIIYKPAKVTP 690

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                 L      F    NR  +     +  G+K  ++  HL+S     +  N       
Sbjct: 691 DGGPVFLNSNSGIF--QQNRLPLAQTFIDQRGEKFTLVVNHLRSKLGESTGLNADILDGQ 748

Query: 183 LLSQQAQ-----WLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               Q +      +  W+     +     FV+ GDFN               ++ +  + 
Sbjct: 749 SAFNQVRTDAVQEILSWVQGDPTRSGDPDFVMLGDFNAYEQEDPI-----TLMEASGYVN 803

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE------------- 282
             P  +    +          +D+     +  K  +  +   I   E             
Sbjct: 804 LVPAGQSKDFDGFLGD-----LDHIFASPSMAKQFVGGAKWIINSVESLSRFEYDAADLL 858

Query: 283 ----DDIKSRGKRLSDHCPISIDYD 303
               DD      R SDH P+   + 
Sbjct: 859 PGTADDPIGDEFRCSDHDPVIAGFT 883


>gi|77361838|ref|YP_341413.1| periplasmic calcium binding protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876749|emb|CAI87971.1| conserved protein of unknown function ; putative periplasmic
           calcium binding protein [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 906

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 84/318 (26%), Gaps = 43/318 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT------LLRQYAKNLDADIVFLQEMGS 76
            +R+ S+N+      +G      + +   S+         +      + AD++ L E+ +
Sbjct: 457 DLRVASFNVLNYFNGDGQGAGFPTSRGADSEAEFIRQEAKIVSAISAIQADVIGLMEIEN 516

Query: 77  YNA------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                     + V   N +        +     +  ++ I TA+  R   V  +  +   
Sbjct: 517 DGFGEFSAIASLVNALNDFDTANQYAFVNFGLDKIGSDAITTALIYRVNRVVEVGSAAIT 576

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--- 187
             +   F       A    V    +       HLKS     S            +     
Sbjct: 577 TQSPFDFGNRPP-IAQSFKVLATDEVFTAAVAHLKSKGGCSSATGANQDKSDGQACWNET 635

Query: 188 ----AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
               A     W+  K         ++ GD N                           + 
Sbjct: 636 RVAGANAYASWLNSKPTGIDDEDIILIGDLNAYAMEDPIRAFADNGYKNA----VAELDG 691

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------ 289
           ++   +         +DY ++  +    ++  +   I  +E  +                
Sbjct: 692 NTLGYSYSFSGRAGSLDYALVSPSLLSKIVATNDWHINADEPTLLDYNVEFKSDAQQSSL 751

Query: 290 -----KRLSDHCPISIDY 302
                 R SDH PI +D 
Sbjct: 752 YAAGPYRASDHDPIIVDI 769


>gi|315648386|ref|ZP_07901485.1| Endonuclease/exonuclease/phosphatase [Paenibacillus vortex V453]
 gi|315276080|gb|EFU39426.1| Endonuclease/exonuclease/phosphatase [Paenibacillus vortex V453]
          Length = 494

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 84/311 (27%), Gaps = 42/311 (13%)

Query: 1   MIRKYVLALVFFLVP----CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           M+  ++                + +  +R++S+N+   +                +   +
Sbjct: 11  MMLTFLTTTSLSAASEPAGTAETSSGPLRIMSFNLRYAANDHQP---------WENRRPV 61

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +R        D++  QE      V        +       R                   
Sbjct: 62  MRNLILENQPDVIGTQEGLHRQIVDLENDLPGYGRIGVG-REGGEFGEYMAVFYKMDRLK 120

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
             +         P + +  S+     R    +  +   NGK  ++++ HL          
Sbjct: 121 PLEQSHFWLSDTPQIISSASWGNQIPRMVTWVRFQDLRNGKTFYMVNTHLDH-------- 172

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND-S 233
                S     + A  + D +       +P V+ GDFN        +      +     +
Sbjct: 173 ----QSEVSRQKSAALIIDKMKGFAP-DIPVVMTGDFNTVPGSDTYSIFTSNGLSDGHIT 227

Query: 234 LIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             +   +     +  K+     +   ID+ +             ++ +     +    G+
Sbjct: 228 AKKHTNDDLGTFHNYKDPTGGGSGNRIDWILHS---------TGWNVLHSEIINYNEEGQ 278

Query: 291 RLSDHCPISID 301
             SDH PI I 
Sbjct: 279 YPSDHYPIMIT 289


>gi|329925648|ref|ZP_08280466.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus
           sp. HGF5]
 gi|328939675|gb|EGG36018.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus
           sp. HGF5]
          Length = 272

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 101/323 (31%), Gaps = 72/323 (22%)

Query: 1   MIRKY-VLALVFFLVPCTAS--------VAQKV--RLVSWNINTLSEQEGVSLWKNSVKR 49
           M + +  L    F++P  A+          ++V   ++S+NI+     +G          
Sbjct: 1   MKKSFKSLIACLFIIPLFATGVMAEGKGQGKEVGTTVMSYNIHHGVGIDG---------- 50

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINH 101
                  +    ++  A+IV LQE+           +   ++     +   Y     +  
Sbjct: 51  -QLSLQRIADVIRDSGAEIVGLQEVDRNYGERSDFRDQAKELAGLLGYHYAYGANLDLEP 109

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
            +  +NN  +   A+  K   +  ++  L            R  +  +V + G  + V +
Sbjct: 110 GEGQTNNRQY-GTAIVSKYPILRSENTWLSSFG-----KEQRGVLHAVVNLKGIHVDVYN 163

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            HL                 +    QAQ +   I     S  P ++ GD N + +     
Sbjct: 164 THLGL-------------DVTSRMAQAQEI---IDLASGSQGPALLLGDLNAEPDSSE-- 205

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
              ++ +  +   +   +           +     IDY +   N          ++ +  
Sbjct: 206 ---FRLLLDSGLFVNSFEGI-DDAYTFPVINPSATIDYILTSPNVRH------ANQRVIQ 255

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
            +         SDH PI+ D  F
Sbjct: 256 TE--------ASDHLPIAADVVF 270


>gi|94313911|ref|YP_587120.1| putative endonuclease/exonuclease/phosphatase [Cupriavidus
           metallidurans CH34]
 gi|93357763|gb|ABF11851.1| putative endonuclease/exonuclease/phosphatase [Cupriavidus
           metallidurans CH34]
          Length = 848

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 84/319 (26%), Gaps = 47/319 (14%)

Query: 20  VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               VR+ S+N+ N  +     + + +   R              +    + +DAD+V L
Sbjct: 454 AQADVRVASFNVLNYFNGDGKGTGFDDPNNRGAKSQAEFERQEAKIVAAIRAIDADVVGL 513

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPL 130
            E+ +         +       +  R ++        + I  AI    +NV       P+
Sbjct: 514 MEIENDGYGDLSAIRRLTSQLGADWRYVDPGLPKLGGDAITVAIIYNSRNVE------PV 567

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKS-FCFLDSLENTYSPSCS----- 182
                      NR+ +       G      V+  HLKS  C   + ++            
Sbjct: 568 GVPATLAIDDKNRQPLARTFHRVGGTQNFTVVVNHLKSKGCTGAAGKDADQGDGQSCWNP 627

Query: 183 LLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
              + A  + DW+      +     ++ GD N                          K 
Sbjct: 628 TRLRAAGLIADWLATSPTGVADVGKLLIGDLNSYAKEDPVL-----LFAEKGYADMVAKF 682

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289
                 +         ID+ +        +       I  +E                  
Sbjct: 683 VGKDAYSYVFGGESGYIDHALATSALADRVRAVHEWHINADEPIALEYSFAYKSAEQQQT 742

Query: 290 ------KRLSDHCPISIDY 302
                  R SDH P+ +D 
Sbjct: 743 FYAADPYRSSDHDPVLVDL 761


>gi|222054058|ref|YP_002536420.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. FRC-32]
 gi|221563347|gb|ACM19319.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. FRC-32]
          Length = 258

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 87/297 (29%), Gaps = 44/297 (14%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           L+    P   ++     ++++N+++    +G                 + +   + D DI
Sbjct: 2   LIDIFQPSHPAMTIHFSVMTYNVHSCIGMDGKVSP-----------LRIAEVIAHYDPDI 50

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           V LQE+ +    + +  +              HS        +   A+  +    L +  
Sbjct: 51  VALQELDAGLTRSDLVDQAHLIAKSLEMSYHFHSSIQVEEGEY-GNAILSRFPIHLVKGG 109

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            L            R AV   VE+ G ++ V+  HL               +      QA
Sbjct: 110 ALPTHP-VNKNLERRGAVWAEVELKGIRVQVVATHLGL-------------NRRERMCQA 155

Query: 189 QWLK--DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             L   DW+    +   P ++ GDFN           F +++       R  + K     
Sbjct: 156 NALSGPDWL-GHPDCRPPVILCGDFNALPGS-FVYRHFIRSLHDAHRKGRGRRLK----G 209

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   + IDY  +  +     I                     SDH P+    +
Sbjct: 210 TWPVRLPLMRIDYLFVTPDITVRRISA----------HRTPLTMAASDHLPLVAALE 256


>gi|60680824|ref|YP_210968.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis NCTC 9343]
 gi|60492258|emb|CAH07023.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis NCTC 9343]
          Length = 285

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 84/316 (26%), Gaps = 43/316 (13%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M +      VF  +      +  +   R+ ++NI   +  + ++ WK            +
Sbjct: 1   MNKICFFIGVFITLLLAGCSSNPITHVRVATFNIRYDNPGDSLNSWKYRK-------EKV 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            ++ +    D++ +QE+ ++     +     +                +           
Sbjct: 54  CEFIREKHPDVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175
             +       +P    K  +  A  R A    ++    GK+  +L+ H     F      
Sbjct: 114 LDSNTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTE 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               S  L+  + + +            P ++ GDFN    +              D+  
Sbjct: 169 ARRNSALLIIDKIKEIA--------GTHPAMMTGDFNVSEEWEAYKTITSNEFVLKDAWK 220

Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
              K+                    +  ID+  +                        + 
Sbjct: 221 IAGKQSGEN---YTFHDFGRVPVGEREKIDFIFVTPQIKVA--------DAEIISSAITD 269

Query: 289 GKRLSDHCPISIDYDF 304
              LSDH     D +F
Sbjct: 270 STYLSDHNAHLADLEF 285


>gi|127513098|ref|YP_001094295.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4]
 gi|126638393|gb|ABO24036.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4]
          Length = 945

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/329 (13%), Positives = 98/329 (29%), Gaps = 51/329 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +    +++ S+N+      +G+          ++          +     ++DADI  L 
Sbjct: 459 AAGGNLKVASFNVLNYFNGDGLGGGFPTDRGADTPSEFARQRAKIISAMVSIDADIFGLM 518

Query: 73  EMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           E+ +             + + +   +  +    +    I            +        
Sbjct: 519 EIENDGFGTESAINDLVSGLNQAVGEARYQFISAPTPTIGTDAITVGMLYRSDRVRPVGA 578

Query: 121 VRVLQQSYPLLGAKDS--FSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFL-----D 171
            +VL  +   L  +    F+   NR ++     V +  +++ V   HLKS         D
Sbjct: 579 AKVLSSANSPLDEQGEVLFNDGKNRPSLTQAFEVLVEDQQLVVAVNHLKSKGSDCVSLGD 638

Query: 172 SLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
              N    +C+   ++ A  L  W+  +    +P ++ GD N        +      +  
Sbjct: 639 PDLNDGQGNCNLTRTRAATALGAWLASEYGE-LPTLVIGDMNAYAKEDPID-----ALRG 692

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289
              L  F     S   +         +D+ + +      ++  +   I  +E  +     
Sbjct: 693 AGYLELFDHLGKSGAYSYVFSGETGQLDHALANTQLADRVVDVTEWHINTDEPRLLDYNE 752

Query: 290 ----------------KRLSDHCPISIDY 302
                            R SDH P+ I  
Sbjct: 753 EFKSAGQIESLYSSDAYRSSDHDPVVISL 781


>gi|119897775|ref|YP_932988.1| putative extracellular nuclease [Azoarcus sp. BH72]
 gi|119670188|emb|CAL94101.1| putative extracellular nuclease [Azoarcus sp. BH72]
          Length = 943

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/354 (12%), Positives = 89/354 (25%), Gaps = 71/354 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------------------TSDYTLL 57
              +VA  +++ S N+                 R                          
Sbjct: 478 AAPAVAGTLKVASINLLNYFNTFDGRPDTVDNCRYGLGGAPTDCRGADDGAEFERQAAKT 537

Query: 58  RQYAKNLDADIVFLQEMGSY-----NAVAKVFP------KNTWCIFYSTERLINHSKRDS 106
                 LDAD++ L E+ +      +A+A +              +   +     +    
Sbjct: 538 VAAILALDADVIGLMEVENDGYGADSALADLVGRLNAVAGPGAYAYLDADAAAGKANALG 597

Query: 107 NNDIHTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWV 159
            + I T +  R   V       + + ++ L       +   NR A+       +G +  V
Sbjct: 598 TDAIKTGLIYRPAKVTRLGTAVLDRGAFGLYTTVSEGTLGRNRPALAQSFRAADGARFTV 657

Query: 160 LDIHLKSF-----------CFLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFV 206
              HLKS                 L +         S  A+ L  W+            +
Sbjct: 658 AVNHLKSKSSSCAGNIAPVPSDPDLGDGQGDCNRTRSTAARELAAWLATDPTAAGDGDVL 717

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           I GD N               +          ++      +         +D+ +   + 
Sbjct: 718 IIGDLNAYAQEDPV-----TALTDAGYTDLVGRDVGRGAYSYVFDGQWGYLDHALASPSL 772

Query: 267 YKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303
            + +   +   I  +E  +                      R SDH P+ I  D
Sbjct: 773 ARQVSGVAEWHINADEPSVLDYNTDYKSAAQIAGYYAADLYRASDHDPVVIGLD 826


>gi|294674281|ref|YP_003574897.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
 gi|294473158|gb|ADE82547.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
          Length = 293

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 84/314 (26%), Gaps = 43/314 (13%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +     + AQ++ + S+NI   ++ +  +              +L         DI   Q
Sbjct: 1   MAASITTQAQELYVGSYNIRYQNDGDAKAGNA-----WQQRMPVLCGQILFEHPDIFGAQ 55

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+        +     +           H+   SN         R K   +    + L  
Sbjct: 56  EVLESQRQDLLKQLTDYDCIGLGRDDGKHAGEHSNIFYD-----RNKIKLLDHGDFWLSE 110

Query: 133 AKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
             +     +  A  R       ++ G  +     +L                  L+ Q+ 
Sbjct: 111 TPEKPGLGWDAACVRICSWGYFKLKGTSLKFYYFNLHM---DHVGTVARREGAKLVVQRI 167

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + +            P V+ GDFN               +  +       +  ++    +
Sbjct: 168 KEIAK--------GKPVVLTGDFNVDQTNEIYGIFTQSGVLDDSFEKAQFRFAENGTFNS 219

Query: 249 KNLRNK--IPIDYFVMDQNAYKF---LIQESFS-------------EILYNEDDIKSRGK 290
            +   K    ID+  +          ++  ++              +     +  K + +
Sbjct: 220 WDPELKTASRIDHVFVSPAFTVQRYGVLTNTYWSEAPQQTDTVKGADAPQEINFQKHQKR 279

Query: 291 RLSDHCPISIDYDF 304
             SDH P+ +   F
Sbjct: 280 LPSDHYPVFVRLTF 293


>gi|91215919|ref|ZP_01252888.1| extracellular nuclease [Psychroflexus torquis ATCC 700755]
 gi|91185896|gb|EAS72270.1| extracellular nuclease [Psychroflexus torquis ATCC 700755]
          Length = 1215

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 90/331 (27%), Gaps = 42/331 (12%)

Query: 14   VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            +     V   +++ S+N+             ++ +        +      L+ADIV L E
Sbjct: 793  IASPEDVGGSLKVASFNVLNYFTTLNERGANSTAELDRQR-EKIAAAICGLNADIVGLIE 851

Query: 74   MGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVL-QQSYP 129
            + +    A+  +               +         D    A       V +    +  
Sbjct: 852  IENNGTTALDDLLNGPNGINTLCGTTYVAVDAGVIGTDQIAVAFIYNTATVSLEGTHAIL 911

Query: 130  LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK-----SFCFLDSLENTYSPSCS-L 183
                   F+   NR A+    +    +  +  +        S C  D   N  + +C+  
Sbjct: 912  DASVDPRFNDNKNRPALAQTFKEISTEGILTIVVNHLKSKGSSCSGDQDLNDGAGNCNLT 971

Query: 184  LSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-- 239
             ++ A  L DW+           ++I GD N        ++    + D   +   F    
Sbjct: 972  RAEAASALVDWLATDPTDSGDSDYLIIGDLNSYQKEDPIDNILLGSDDIEGTTDDFTDLI 1031

Query: 240  --EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------- 289
               +               +DY +   N  + +   +   I  +E  +            
Sbjct: 1032 ADYQGQDGYGYVFDGQLGNLDYALATDNLAEQITGTTVWHINADEISLFDYNDDIQDSSE 1091

Query: 290  -----------------KRLSDHCPISIDYD 303
                              R SDH P+ +  D
Sbjct: 1092 ASFQRESSALPIYEANAFRASDHDPVLLGLD 1122


>gi|121593606|ref|YP_985502.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42]
 gi|120605686|gb|ABM41426.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42]
          Length = 258

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 86/301 (28%), Gaps = 70/301 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WNIN+LS                     +  + +    D + LQE+       K+  
Sbjct: 3   IATWNINSLS----------------VRLPQVLAWLEANPVDAIGLQEL-------KLVD 39

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +      +       +         +  +A+  +          + G  D  +R      
Sbjct: 40  E---KFPHDAFEAAGYHAVCFGQKTYNGVAILSRTPLRDVVRN-IPGHGDEQAR-----V 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   ++     + +++ +  +     + + +Y           + L+DW+  +  +    
Sbjct: 91  IAATLDTPEGPLRLVNCYFVNGQAPGTEKFSYK------LLWLEALRDWLRTELAAHPRL 144

Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+ GDFN       + D                 ++ +        F +  D    +   
Sbjct: 145 VLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERQHFQDLLGLGLTDAF-RLFDQPEKSYSW 203

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ++          ID+ ++       +            D    +  + SDH P+ + 
Sbjct: 204 WDYRMLGFQKNRGLRIDHILVSAALRPSVTAC-------RIDRAPRKNPQPSDHAPVVVS 256

Query: 302 Y 302
            
Sbjct: 257 L 257


>gi|299141468|ref|ZP_07034604.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oris C735]
 gi|298576804|gb|EFI48674.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oris C735]
          Length = 299

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 88/305 (28%), Gaps = 29/305 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +++  + ++  L  CT  +AQ + + S+NI   +  + ++   +  +R       L  + 
Sbjct: 17  MKRTTVFIIALLFTCTL-MAQPLYVGSYNIRY-NVSDDIAEGNSWKQR----CPHLCDFI 70

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                 I   QE+ +      +   + +            +   +       +     + 
Sbjct: 71  NFEQPVIFGAQEVLADQLHDLLQGLDNYGYIGVGREDGKEAGEYAAIFYKKDLLKLLDSG 130

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                  P   +   +  A  R         + + K  +  + H+               
Sbjct: 131 YFWLSETPEKPST-GWDAACIRICTWGKFQDKASKKTFYFFNTHM-----DHVGAVARRE 184

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           S  L+ Q+ + L              ++ GDFN                  +  +    +
Sbjct: 185 SARLIIQRMKEL--------TGGKHTILTGDFNANQTDESYKMFSESGFLHDCYVNAHQR 236

Query: 240 EKDSRCNANK--NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              +    +   +      ID+  + ++        +   I  N   +    + +SDH P
Sbjct: 237 MAPAGTWNDYMQDCPGMARIDHIFVTKDF-----DINHYGIFTNSYWLGKTRRNISDHYP 291

Query: 298 ISIDY 302
           + +  
Sbjct: 292 VMVKL 296


>gi|160890835|ref|ZP_02071838.1| hypothetical protein BACUNI_03280 [Bacteroides uniformis ATCC 8492]
 gi|317479733|ref|ZP_07938855.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|156859834|gb|EDO53265.1| hypothetical protein BACUNI_03280 [Bacteroides uniformis ATCC 8492]
 gi|316904103|gb|EFV25935.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 287

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 77/294 (26%), Gaps = 37/294 (12%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A   + V ++S+NI   + ++ +  W+    R            +  D DI+  QE+   
Sbjct: 23  APAPEPVNVMSFNIRYDNPEDSLDNWQYRKDRA-------ANAIRFYDVDILGTQEVLHN 75

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                      + +              S             +        P +     +
Sbjct: 76  QLEDLKQRLPEYGVIGVGREDGKEKGEYSALWYKKDRFNLLDSGYFWLSETPEVAGSKGW 135

Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             A  R A    +  +++GK+ + L+ HL                 SL+  +   L    
Sbjct: 136 DGACERIASWAKLQDKVSGKEFFALNTHL-----DHVGVAARREGISLMLDKVNEL---- 186

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNL 251
                  +P V+ GDFN                 + +                 +    +
Sbjct: 187 ----SGNLPVVVTGDFNASPESDVIKHVTDPSNPEHLTDARQASAIVYGPAWSFHDFGKI 242

Query: 252 RNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY  +               + Y           LSDH PI +  +
Sbjct: 243 PYDKRPLIDYVFVRNGL---------KVLRYGVLAETENNAFLSDHAPILVTVE 287


>gi|261406650|ref|YP_003242891.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10]
 gi|261283113|gb|ACX65084.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10]
          Length = 272

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 99/323 (30%), Gaps = 73/323 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKV------------RLVSWNINTLSEQEGVSLWKNSVKR 49
           ++K +++L+  L          +             ++S+NI+     +G          
Sbjct: 1   MKKSLISLIACLFIIPLFATGVMAAGKGQGKEVSTTVMSYNIHHGVGIDG---------- 50

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSY--------NAVAKVFPKNTWCIFYSTERLINH 101
                  +    ++  A+IV LQE+  +        +   ++     +   Y     +  
Sbjct: 51  -QLSLQRIADVIRDSGAEIVGLQEVDRHYGERSDFKDQAKELADLLGYHYAYGANLDLEP 109

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
            +  +NN  +   A+  K   +  ++  L            R  +  +V + G  + V +
Sbjct: 110 GEGQTNNRQY-GTAIVSKYPILRSENTWLSSFG-----KEQRGVLHAVVNLRGIHVDVYN 163

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            HL                 +  + QAQ +   I     S  P ++ GDFN + +     
Sbjct: 164 THLGL-------------DVTSRTAQAQEI---IDLASSSQGPALLMGDFNAEPDSSEF- 206

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                 +  N  L     E          +     IDY +   N          ++ +  
Sbjct: 207 -----QLLLNSGLFVNSFEGIDDAYTFPVINPSATIDYILTSPNVRH------ANQRVIQ 255

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
            +         SDH PI+ D  F
Sbjct: 256 TE--------ASDHLPIAADVVF 270


>gi|221066056|ref|ZP_03542161.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1]
 gi|220711079|gb|EED66447.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1]
          Length = 258

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+LS                     + ++      D + LQE+   +     
Sbjct: 1   MKIATWNVNSLS----------------VRLPQVLEWLAANPVDALGLQELKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   +   ++        +  +A   +          + G  D  +R    
Sbjct: 41  ------KFPHMAFQEAGYTAVSHGQKTYNGVAWITRETGRDVVRN-IPGLDDEQAR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++    ++ +++ +  +     S +  Y        +  Q L+DW+ ++     
Sbjct: 90  -IIATTIDSPAGEVRLINGYFVNGQEPGSEKFAYK------MRWLQALQDWVKEQMALHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN       + D                 ++ +        F +  +    + 
Sbjct: 143 RLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVQERDHFQRLLQLGLSDAF-RMFEQPEKSY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++ +     +   S        D    + K+ SDH P+ 
Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSEALRSKVSACSV-------DRAPRKNKQPSDHAPVI 254

Query: 300 IDYD 303
           +  D
Sbjct: 255 VTLD 258


>gi|76818418|ref|YP_336092.1| extracellular nuclease [Burkholderia pseudomallei 1710b]
 gi|76582891|gb|ABA52365.1| Extracellular nuclease [Burkholderia pseudomallei 1710b]
          Length = 514

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 184 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 243

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 244 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 297

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 298 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 357

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  S 
Sbjct: 358 AAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 412

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 413 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAP 472

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 473 DAYRSSDHDPVLIDI 487


>gi|330824047|ref|YP_004387350.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601]
 gi|329309419|gb|AEB83834.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601]
          Length = 258

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 80/301 (26%), Gaps = 70/301 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L +WNIN+LS                     +  +      D + LQE+       K+  
Sbjct: 3   LATWNINSLS----------------VRLPQVLAWLVANPVDAIGLQEL-------KLVD 39

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +      +       +         +  +A+  +                        R 
Sbjct: 40  E---KFPHDAFEAAGYHAVCFGQKTYNGVAIVSRTPPRDVVRNI------PGHDDEQARV 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   +++ G  + +++ +  +     + +  Y        Q    L DW+  +  +    
Sbjct: 91  IAATLDVEGGPLRLVNCYFVNGQAPGTDKFAYK------LQWLAALHDWLRAELAAHPRL 144

Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+ GDFN       + D                 ++ +        F +  +    +   
Sbjct: 145 VLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERQHFRQLLELGLTDAF-RMFEQPEKSYSW 203

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           ID+ ++ +     +            D    +  + SDH P+   
Sbjct: 204 WDYRQLGFQKNRGLRIDHILVSEALRAGVTAC-------RIDRAPRKNPQPSDHAPVVAT 256

Query: 302 Y 302
            
Sbjct: 257 L 257


>gi|149277549|ref|ZP_01883690.1| hypothetical protein PBAL39_05158 [Pedobacter sp. BAL39]
 gi|149231782|gb|EDM37160.1| hypothetical protein PBAL39_05158 [Pedobacter sp. BAL39]
          Length = 278

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 32/303 (10%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M  K +L   F L+ C    AQ + + ++N+   ++ +  +LW +               
Sbjct: 1   MKLKLLLFSAFTLMTCLGLQAQSLTIGTFNLRYDTKSDTGNLWVDRAPIA-------ANL 53

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            +    D++ +QE               +            +   S     +      K 
Sbjct: 54  IRFHGFDVLGVQEGLINQINDLSKALPEYERAGVGRDDGKEAGEHSAIYYRSDRFKLLKK 113

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178
                   P    K       NR    + ++     K  +V + H               
Sbjct: 114 GDFWLSETPDKPGKGWDVTCCNRICSWVYLQDMSTKKSFYVFNAHFDH------------ 161

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI-DPNDSLIRF 237
            +     + A+ +   I +      P +  GD N               +     S +++
Sbjct: 162 QAVIARQESAKLILRKINEIAG-NSPALFMGDLNGSRTSEWYLALANSGLIKDVHSAVKY 220

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           P E +   N  K  +    ID+  M +           ++  +        GK  SDH P
Sbjct: 221 PYENNGSSNGFKIPKGMGVIDHIFMSKQFTAQ-KWGILTDTYF--------GKYPSDHFP 271

Query: 298 ISI 300
           +  
Sbjct: 272 VLA 274


>gi|218709697|ref|YP_002417318.1| putative phospholipase C precursor [Vibrio splendidus LGP32]
 gi|218322716|emb|CAV18892.1| putative phospholipase C precursor [Vibrio splendidus LGP32]
          Length = 444

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 88/296 (29%), Gaps = 36/296 (12%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
               A  ++++++NI  L                   Y L+ QY K    D++ LQE+ +
Sbjct: 174 PEPDANTLKVITYNIWALPAIASHIGD---------RYDLIPQYVKGY--DVLALQEVFA 222

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 +        + +     +         I   I  R   V   Q  +P     D 
Sbjct: 223 NGRDEFLRELAKEYPYQTKMLDKDGINIYDGGVI---IVSRYPIVNEAQYVFPDCTGTDC 279

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F+           V  NG+   V   H  SF    + +           +Q + L   + 
Sbjct: 280 FADK---GVNYAEVIKNGQAYHVFGTHTASFDTDTARDYRQRQ-----FKQMRALAQSLN 331

Query: 197 QKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251
                    V +GDFN   + +  +    +  +  +     +     S  +   N     
Sbjct: 332 IPASET--VVYSGDFNVNKLKFPDDYQQMFANLQADKPT--YSGYTASTFDPRINNFAGE 387

Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 N   +DY V+          ++  ++  +      +   LSDH P+S   
Sbjct: 388 PMSGGENVEYLDYVVVSSEYAAKAHNDNRVDVPRSTSSELWKHYNLSDHFPVSAVI 443


>gi|154491719|ref|ZP_02031345.1| hypothetical protein PARMER_01330 [Parabacteroides merdae ATCC
           43184]
 gi|154087960|gb|EDN87005.1| hypothetical protein PARMER_01330 [Parabacteroides merdae ATCC
           43184]
          Length = 287

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 89/310 (28%), Gaps = 41/310 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           ++K +  L   L+      A+    ++ ++S+NI   ++ +G +              L 
Sbjct: 1   MKKVLFYLFTLLISTNIVFAEHLDNEMNVMSFNIRMSTKSDGAN-------WWEYRKDLA 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               K  D D+   QE+        +     +                S           
Sbjct: 54  ANVIKFYDVDMFGAQEVLHNQLTDLLDRLPDYGYVGVGREDGKTKGEYSPILYRKDRFSV 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175
            K+             K  +  A  R A   + +   +GK+ + L+ HL         + 
Sbjct: 114 VKSGNFWLAEDMNAVGKKGWDAACERVATWAIFKDKKSGKEFFFLNTHL-----DHMGQV 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPN 231
                 SL+ +Q + L           +P ++ GDFN                 + +   
Sbjct: 169 ARHEGASLVLKQVKLLSR--------NLPVIVTGDFNAVPTDDPIKVLTDEKDPRHLTHA 220

Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +L       +   +      L  ++ IDY  +  N            + +         
Sbjct: 221 RTLAPLCYGPEWTFHDYGRVPLDERVWIDYIFVKGN---------VKVLRHGVLAESLDN 271

Query: 290 KRLSDHCPIS 299
              SDHCP+ 
Sbjct: 272 LYPSDHCPVI 281


>gi|330960959|gb|EGH61219.1| exonuclease III [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 270

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 83/312 (26%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++    + +         H  +A+  +N  +        G +     A  R
Sbjct: 41  ------QFPHADIEALGYHVHFHGQKGHYGVALLSRNPPLELHK----GFEGDNEDAQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + NG+ I +++       F       +        +  + L+  +  +  +  
Sbjct: 91  FIRGAYADSNGQPIIIMN-----GYFPQGESRDHPTKFPAKQRFYEDLQQLLESRFSNEQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++ + +     +  F     
Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGMVDSFRYLHP 205

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +        +            D      ++
Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++  
Sbjct: 259 PSDHAPIWLELS 270


>gi|325914373|ref|ZP_08176720.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC
           35937]
 gi|325539381|gb|EGD11030.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC
           35937]
          Length = 572

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 88/324 (27%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+N+       G      +       ++  +  + L   
Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLSKLVAT 315

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +    A            +       + ++ +    ++ I   + 
Sbjct: 316 IVPLQADVAALMELENDGDGADAAVAQLVAALNAAGKDKDWQFVDTANGPGDDAIRVGMI 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +      N G    V+  H KS  C   S 
Sbjct: 376 YRNSQVTPVGKPATLTGGPFDSH---SRVPLAQAFRSNRGATFVVVANHFKSKGCGNASG 432

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L  W+            V+ GDFN              
Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMETPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L       +  +  D  
Sbjct: 489 -LRASGWQDAFAVAGVKQPYSYVYDGMSGRLDHALLSPAMAKQLRGAVEWHVNADAMDDA 547

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571


>gi|301162321|emb|CBW21866.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis 638R]
          Length = 285

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 84/316 (26%), Gaps = 43/316 (13%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M +      VF  +      +  +   R+ ++NI   +  + ++ WK            +
Sbjct: 1   MNKICFFIGVFITLLLAGCSSNPITHVRVATFNIRYDNPGDSLNSWKYRK-------EKV 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            ++ +    D++ +QE+ ++     +     +                +           
Sbjct: 54  CEFIREKHPDVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175
             +       +P    K  +  A  R A    ++    GK+  +L+ H     F      
Sbjct: 114 LDSNTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTE 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               S  L+  + + +            P ++ GDFN    +              D+  
Sbjct: 169 ARRNSALLIIDKIKEIA--------GTHPAMMTGDFNVSEEWEAYKTITSNEFVLKDAWK 220

Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
              K+                    +  ID+  +                        + 
Sbjct: 221 IAGKQSGEN---YTFHDFGRVPVAEREKIDFIFVTPQIKVA--------DAEIISSAITD 269

Query: 289 GKRLSDHCPISIDYDF 304
              LSDH     D +F
Sbjct: 270 STYLSDHNAHLADLEF 285


>gi|307308162|ref|ZP_07587877.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti
           BL225C]
 gi|306901365|gb|EFN31970.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti
           BL225C]
          Length = 265

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 81/284 (28%), Gaps = 49/284 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++R +++N+++    +              D   +         D++ LQE+    A  
Sbjct: 19  QRIRFLTYNVHSCFGTDR-----------RLDPARIAAVIAECQPDVIALQEVDVGRART 67

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +      +       H       D     AV       L ++ PL  +        
Sbjct: 68  GGIDQAHMIATHLNMEAEFHP-ALHLEDEKYGDAVLTALPMRLIKAAPLPSSG------E 120

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199
            R A+ + +++   K+ V+  HL                 +   +QA  L    W+    
Sbjct: 121 PRGALWVEIDVAAVKLQVIVTHLGLRG-------------AERLRQATALLGPGWLGGMA 167

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                 V+AGD N             + +     L               +    + ID+
Sbjct: 168 HGDAHVVLAGDLNAT-GRSTAYRLLARQLSDAQLLTGA-----KPRPTFPSRLPLLRIDH 221

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++ +         S            +  +  SDH P+  + D
Sbjct: 222 VLIGKGIEV----ASCRVH------GSTLARSASDHLPLLAELD 255


>gi|57235078|ref|YP_180859.1| endonuclease/exonuclease/phosphatase family protein
           [Dehalococcoides ethenogenes 195]
 gi|57225526|gb|AAW40583.1| endonuclease/exonuclease/phosphatase family protein
           [Dehalococcoides ethenogenes 195]
          Length = 591

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 86/288 (29%), Gaps = 54/288 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P     +  +R++++N++     +G             D   L +  ++  AD+V LQE+
Sbjct: 355 PAAPQFSGTLRIMTYNLHNGFNTQG-----------KLDLEALARVIEDSGADVVALQEI 403

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                ++       W      +RL  H    +    +   A+  K   +   +  L    
Sbjct: 404 SRGWVISGRVDMLEWL----AQRLNMHFAFGATAGEYWGNAILSKYPILDTHNVSLESEG 459

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  +  ++++  + +++   HL                  +   QA+ L D+
Sbjct: 460 LPIK----RGYLNAVLDLGVRYLYLAATHLHHVP----------EEGEVRVIQAEELADF 505

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                 +    VI GDFN + +           +           +         +L   
Sbjct: 506 WHHAPST----VIMGDFNAEPDSAEI-----AILRQAGFSDSLEGQTSVLTYHAADLY-- 554

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             IDY     +       +S++                SDH  I  D 
Sbjct: 555 QRIDYIWASPDIE---YLDSYTVFSL-----------ASDHLAIIADI 588


>gi|315128102|ref|YP_004070105.1| hypothetical protein PSM_A3040 [Pseudoalteromonas sp. SM9913]
 gi|315016615|gb|ADT69953.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 887

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 89/317 (28%), Gaps = 41/317 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ------YAKNLDADIVFLQEMGS 76
            +R+ S+N+      +G      + +   S+  L+RQ          + AD++ L E+ +
Sbjct: 460 DLRVASFNVLNYFNGDGQGSGFPTSRGADSEVELIRQQAKLVSAISAMQADVIGLMEIEN 519

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---A 133
                     +        +    ++  D   D     A+    +    +   +      
Sbjct: 520 DGFGEFSAVASLVNALNDADSQNQYAFVDFGVDKIGTDAITTALIYRADKVQQVGTAAIT 579

Query: 134 KDSFSRAGNRRAVELLVEINGKK----IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            D+     NR  +    +    +    + V  +  K  C   +  N           + +
Sbjct: 580 TDAPFDYSNRAPIAQSFKSLETEEVFTVAVAHLKSKGGCGSATGGNADQNDGQACWNEIR 639

Query: 190 -----WLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                   DW+  K         ++ GD N             K +      +    + +
Sbjct: 640 TAGANAFADWLNSKPTGVDDEDIILVGDMNAYAMEDPIRAFADKGLKN----VVAELDGN 695

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------- 289
           +   +         +D+ ++  +    ++  +   I  +E                    
Sbjct: 696 TLGYSYSFSGRAGSLDHALVSPSLLNKVVSATDWHINADEPISLDYNVEFKSDAQQSTLY 755

Query: 290 ----KRLSDHCPISIDY 302
                R SDH P+ +D 
Sbjct: 756 AQGPYRASDHDPVIVDI 772


>gi|152974395|ref|YP_001373912.1| sphingomyelin phosphodiesterase [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023147|gb|ABS20917.1| Sphingomyelin phosphodiesterase [Bacillus cytotoxicus NVH 391-98]
          Length = 330

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 109/338 (32%), Gaps = 47/338 (13%)

Query: 1   MIRKYVLALVFFL------VPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVK 48
           M++  +L  +         +  +++ A         ++++ N+  LS      L+ N  +
Sbjct: 1   MMKSKLLKGILSFGIGLTALYSSSAQAETSSDSDTFKIMTHNVYMLSTN----LYPNWGQ 56

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI---------FYSTERLI 99
           +  +D      Y K  + D+V L E+    A   +                         
Sbjct: 57  KERADLIGEANYIK--NQDVVILNEVFDNKASDSLLQNLKKEYPNQTAVLGRVNGDMWDQ 114

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                 S       +A+  K   V +  Y             N+  V   ++ + + I V
Sbjct: 115 TLGNYSSVAPEDGGVAIVSKWPIVEKVQYVFQKGCGP-DNLSNKGFVYTKIKKDDRFIHV 173

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI--- 215
           +  HL++    D+     SPS S+ + Q + ++++I  +   S    VI GD N      
Sbjct: 174 IGTHLQA---EDNQCGNISPS-SVRTNQLKEIQEFIQKKNIPSDEYVVIGGDMNVNKINS 229

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKD-SRCNANKNLRNK----IPIDYFVMDQNAYKFL 270
           N+    +  +KT+  +            +  N+             +DY V  ++     
Sbjct: 230 NHTSEYESMFKTLHASVPSYTGHTATWDATTNSIAKYNFPEAPAEYLDYIVTSKDHATPT 289

Query: 271 IQESFSEILYNEDDIKSRGKR------LSDHCPISIDY 302
             E+      + +   +   +       SDH P+    
Sbjct: 290 YLENKVLQPKSPEWSVTSWFKTYTYNDYSDHYPVEATI 327


>gi|325929159|ref|ZP_08190302.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
 gi|325540478|gb|EGD12077.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
          Length = 287

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 80/282 (28%), Gaps = 33/282 (11%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++S+N+        V    +  KR       +    K    D+   QE+ S  A     
Sbjct: 35  RVMSFNVR-------VPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAE 87

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  F    R  +  +          +    ++        P      ++     R 
Sbjct: 88  QLPDYRWFGQGRRGDDSDEHM-GVFYDARVLKVVESGNFWLSDTPERAGSITWGNVLPRM 146

Query: 145 AVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           A   L E   + ++ ++ + H       D  E     S  L+  +   L         + 
Sbjct: 147 ATWALFERRSDKRRFYLFNTHFPYR---DEDEPARERSARLILSRIAQL--------PAT 195

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           VP V+ GDFN   +           +  +       +        +        ID+ + 
Sbjct: 196 VPVVLTGDFNSDPD--KITYPTLTAVLRDARAQASKRSGPENTFQDFTTHPTRRIDWILY 253

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            +   D +  G   SDH P+  ++D+
Sbjct: 254 RG----------LRPTRFATLDDRPGGILPSDHYPVMAEFDW 285


>gi|168698628|ref|ZP_02730905.1| hypothetical protein GobsU_03844 [Gemmata obscuriglobus UQM 2246]
          Length = 290

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 87/318 (27%), Gaps = 44/318 (13%)

Query: 1   MIRKYVLALVFFLVP---CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M R   L L    +            VR++S+NI   + ++G + W             L
Sbjct: 1   MHRFLYLLLAAIGLAPAVNAQPPKGDVRVMSFNIRYGTAKDGENHWDKRK-------EFL 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               K    D++  QE   +           +                +      A   +
Sbjct: 54  ADTVKAFGPDLLGTQETLIFQRDFLSQKLTGYEGLGVGREDGKEKGETTALYWRKARFEK 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSL 173
                      P +    S+  +  R A  + +    + N K +  ++ H     F    
Sbjct: 114 TDGGHFWLSETPNVAGSKSWDSSLPRMATWVKLKDLAKPNAKPVLFVNTH-----FDHIG 168

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-- 231
           +        L+  +   L         +    V+ GDFN   +       F         
Sbjct: 169 KKARIEGAKLIRDRIGAL--------GAGCSVVVTGDFNSGEDSEPYRTLFAARDKNESP 220

Query: 232 --DSLIRFPKEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             DS      +++       N +        ID+  + ++         ++      D  
Sbjct: 221 VMDSFRAAHPKREPNEGTFTNFKAGPVKGDRIDWIGVSRD---------WTVTGAGIDRT 271

Query: 286 KSRGKRLSDHCPISIDYD 303
           +  G+  SDH P++    
Sbjct: 272 EKDGRTPSDHFPVTATLS 289


>gi|167573681|ref|ZP_02366555.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           oklahomensis C6786]
          Length = 614

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 93/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K L+AD++ L E+ 
Sbjct: 284 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKNYDEFVRQDAKIVSALKALNADVIGLMEIE 343

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         +          R+++    R   + I  A+    + V+      P+  A 
Sbjct: 344 NDGYGELSAVRQLAAKLGDGWRVVDPGIARLGGDAISVALIYDSRKVK------PVGEAA 397

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS     +  +            +  ++
Sbjct: 398 TLAIDDKNRQPLAQTFRPVGGSRAVTVAVNHLKSKNCPSATGDDLDQGDGQGCWNATRTR 457

Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  + 
Sbjct: 458 AASKVADWLARTPTGVPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAG 512

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 513 AYSYVYNGEAGYLDHALASSALASRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 572

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 573 DAYRSSDHDPVLIDI 587


>gi|78778870|ref|YP_396982.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9312]
 gi|78712369|gb|ABB49546.1| Exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9312]
          Length = 281

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 92/301 (30%), Gaps = 63/301 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   +  + +  +   ++ DI+ LQE        KV  
Sbjct: 3   IATWNVN----------------SIRTRLSQIIDWMNQVNPDILCLQE-------TKVMD 39

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            +     +     + +S        +  +A+  K      +     G  DS   A     
Sbjct: 40  NS---FPFEPFEKLGYSVEVYGQKAYNGVAIISKIKAENVKKG-FYGCSDSDQNAEIFLD 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + L+  +   I ++++++ +   L+S +  Y             L  ++ ++++     
Sbjct: 96  QKRLISADINGIKIINVYVPNGSSLESNKFEYK------INWLSSLASYLDEQEKKGELI 149

Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPN-------DSLIRFPKEKDSRCNANKNL 251
            + GDFN   + L   D            I+ N       + LI   +  +         
Sbjct: 150 CLMGDFNVAPSNLDIYDPKKYEGGIMASEIERNALNNVLKERLIDSFRIFEKNPGHWSWW 209

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+  + +     L            D       R SDH P+ ID 
Sbjct: 210 DYRNNAYELNKGWRIDHIYISKELSSKLKSCVI-------DSSPRANLRPSDHAPVMIDL 262

Query: 303 D 303
           +
Sbjct: 263 N 263


>gi|15599104|ref|NP_252598.1| Extracelullar DNA degradation protein, EddB [Pseudomonas aeruginosa
           PAO1]
 gi|9950092|gb|AAG07296.1|AE004808_6 Extracelullar DNA degradation protein, EddB [Pseudomonas aeruginosa
           PAO1]
          Length = 779

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 99/329 (30%), Gaps = 45/329 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADI 68
           P   +V  ++R+ S+N+      +G           N+ +        +        ADI
Sbjct: 445 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 504

Query: 69  VFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNV 121
           V L E+ +      +A+A +       +         +  R    +++I   +  R   V
Sbjct: 505 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKV 564

Query: 122 RV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF---CFLDSLEN 175
           R     +         F    NR  +    +    G+++ +   HLKS    C  D    
Sbjct: 565 RTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG 624

Query: 176 TYSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
               +C+   ++ AQ L  W+            +I GD N        N      I    
Sbjct: 625 DGQGNCNLTRARAAQALVGWLAGDPTGAKEPDRLIIGDLNSYAKEDPVN-----VIRSAG 679

Query: 233 SLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
                 ++  +    +         +D+ + + +  + +       I  +E  +      
Sbjct: 680 YTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVE 739

Query: 290 ---------------KRLSDHCPISIDYD 303
                           R SDH P+ I  D
Sbjct: 740 FKTPRQQDSLYNAEPYRASDHDPVVIGID 768


>gi|270295395|ref|ZP_06201596.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274642|gb|EFA20503.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 283

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 84/308 (27%), Gaps = 43/308 (13%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
             ++A V  +  C      KV ++S+NI        +    +S+           Q    
Sbjct: 8   SVLVAFVLLVASCGKQPEAKVEVMSFNIR-------LDHVADSMNNWKYRKDNAAQMIAY 60

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
              DIV +QE+              +                 +    T      KN   
Sbjct: 61  YAPDIVGMQEVVKNQLNDLKERLPQYTALGVGRADGKEKGEYCSLFYKTERFELLKNGDF 120

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                P    K  +  A  R     ++  +++G+K+   + H     F    E     S 
Sbjct: 121 GLSETPDSIGKKGWDAACERIVTWAVLKDKVSGRKVAAFNTH-----FDHVGEVARRESA 175

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L+ ++ + +   +        P +I GDFN  ++           +            K
Sbjct: 176 KLILEKIKQIAGEL--------PVIITGDFNGTVDSEPV-----TILTEGGMRNACSTAK 222

Query: 242 DSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                              +  ID+  ++          S     Y     K     LSD
Sbjct: 223 VVYGPTWSFHDFGRIPVEKRRLIDFIFVN---------ASVEVERYRTVGDKPDNGYLSD 273

Query: 295 HCPISIDY 302
           H P+ +  
Sbjct: 274 HAPVLVTL 281


>gi|289664940|ref|ZP_06486521.1| nuclease [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 572

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 87/324 (26%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L+L          V   +R+ S+N+       G      +       ++  +    L   
Sbjct: 256 LSLPAMPTAVAPQVGGNLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +    A            +       + I+       + I   I 
Sbjct: 316 IVPLGADVAALMELENDGDGADAAVAQLVAALNAAGKDKDWQFIDTGSGPGEDAIRVGIV 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +        G    V+  H KS  C   S 
Sbjct: 376 YRSSQVTPVGKPATLTGGPFDNH---SRVPLAQAFRSTRGATFVVVANHFKSKGCGNASG 432

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L  W+            V+ GDFN     +        
Sbjct: 433 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYAMEMPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L   +   I  +  D  
Sbjct: 489 -LRASGWQDAFAVAGVKQPYSFVYDGMSGRLDHALLSPAMAKQLRGAAEWHINADVMDAA 547

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571


>gi|299530483|ref|ZP_07043903.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44]
 gi|298721459|gb|EFI62396.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44]
          Length = 258

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 88/304 (28%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+LS                     +  +      D + LQE+   +     
Sbjct: 1   MKIATWNVNSLS----------------VRLPQVLDWLAANPVDALGLQELKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       +         +  +A   ++         + G  D  +R    
Sbjct: 41  ------KFPHMAFEEAGYKAVSHGQKTYNGVAWITRDTGRDVVRN-IPGLDDEQAR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++    +I +++ +  +     S +  Y        +  Q L DWI  +     
Sbjct: 90  -IIATTIDSPNGEIRLINGYFVNGQEPGSEKFAYK------MRWLQALHDWIQNQMTLHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN       + D                 ++ +        F +  +    + 
Sbjct: 143 RLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERDHFQRLLQLGLSDAF-RMFEQPEKSY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++ +     +   S        D    + K+ SDH P+ 
Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSEALKSKVSACSV-------DRAPRKNKQPSDHAPVV 254

Query: 300 IDYD 303
           +  +
Sbjct: 255 VTLN 258


>gi|73748062|ref|YP_307301.1| endonuclease [Dehalococcoides sp. CBDB1]
 gi|73659778|emb|CAI82385.1| probable endonuclease [Dehalococcoides sp. CBDB1]
          Length = 639

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 88/288 (30%), Gaps = 54/288 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P        +R++++N++     +G             D   L +  ++  AD+V LQE+
Sbjct: 403 PSPPQFEGSLRIMTYNLHNGFNTQG-----------KLDMEALARVIEDSGADVVALQEI 451

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                ++       W     ++RL  +S   +    +   A+  K   +   +  L   +
Sbjct: 452 SRGWVISGRVDMLEWL----SQRLNMYSAFGATAGEYWGNAILSKYPILDTHNVSLESEE 507

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  +  ++++ G+ +++   HL                  +   QA  L D+
Sbjct: 508 LPIK----RGYLNAVLDLGGRYLYLAATHLHHVPEEGD----------VRLIQAGELADF 553

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                 +    +I GDFN + +           +           E  +      +    
Sbjct: 554 WDNAPAT----IILGDFNAEPDSEEIGLLRQAGLSD-------SLEGQTSVLTYHSADLY 602

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             IDY        +++   +   +              SDH  I  D 
Sbjct: 603 QRIDYIWASPEI-EYIDSYTIVSL-------------ASDHLAIIADI 636


>gi|147668908|ref|YP_001213726.1| endonuclease/exonuclease/phosphatase [Dehalococcoides sp. BAV1]
 gi|146269856|gb|ABQ16848.1| Endonuclease/exonuclease/phosphatase [Dehalococcoides sp. BAV1]
          Length = 639

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 54/288 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P        +R++++N++     +G             D   L +  ++  AD+V LQE+
Sbjct: 403 PSPPQFEGSLRIMTYNLHNGFNTQG-----------KLDMEALARVIEDSGADVVALQEI 451

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                ++       W     ++RL  +S   +    +   A+  K   +   +  L    
Sbjct: 452 SRGWVISGRVDMLEWL----SQRLNMYSAFGATAGEYWGNAILSKYPILDTHNISLESEG 507

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  +  ++++ G+ +++   HL                  +   QA  L D+
Sbjct: 508 LPIK----RGYLNAVLDLGGRYLYLAATHLHHVPEEGD----------VRLIQAGELADF 553

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                 +    +I GDFN + +           +           E  +      +    
Sbjct: 554 WDNAPAT----IILGDFNAEPDSEEIGLLRQAGLSD-------SLEGQTSVLTYHSADLY 602

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             IDY        +++   +   +              SDH  I  D 
Sbjct: 603 QRIDYIWASPEI-EYIDSYTIVSL-------------ASDHLAIIADI 636


>gi|110634038|ref|YP_674246.1| exodeoxyribonuclease III [Mesorhizobium sp. BNC1]
 gi|110285022|gb|ABG63081.1| Exodeoxyribonuclease III [Chelativorans sp. BNC1]
          Length = 262

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 84/302 (27%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L  + +  + DIV LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARIENLVHWLQEANPDIVCLQEIKSLDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------QFPREPIEALGYHVETHGQKGFNGVALLSKLRFDEVSRGLPGNDGDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +    G  + V  ++L +   + S +  Y  +          L+ W  ++     
Sbjct: 92  --IEGVFSTEGGALRVASLYLPNGNPIASEKFAYKLA------WMDRLELWAKRRLMLEE 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
           P V+AGD+N      +     +     +             N       +   +      
Sbjct: 144 PLVLAGDYNVIPEPADAKNPENWLGDALYQPESRQAFRRLCNLGFTDALRSATNEPGTYT 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   +   S  +            ++ SDH P+ +
Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEAADRIASASVQKHT-------RAWEKPSDHVPVVV 256

Query: 301 DY 302
           D 
Sbjct: 257 DL 258


>gi|167463375|ref|ZP_02328464.1| hypothetical protein Plarl_12581 [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322382169|ref|ZP_08056092.1| hypothetical protein PL1_2483 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321153888|gb|EFX46246.1| hypothetical protein PL1_2483 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 247

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 88/292 (30%), Gaps = 56/292 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---- 76
           A + R+V++NI+     +              +   + Q  +   AD++ L E+      
Sbjct: 4   AMEFRVVTFNIHHGRGTDR-----------KLNLDRIAQVIEKSQADVIALNEVDKYFSR 52

Query: 77  ----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                + +  +  +      +   +    S+           A+  +   V  +++ L  
Sbjct: 53  RSEYTDQLGWLSERLKLDGIFGAAKTNKVSEETDCMIREYGNALLSRFPIVDVKNHNLSV 112

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                 R   R  +E+ + I G+ + +   HL    F+ S              QA  + 
Sbjct: 113 YPI---RLEGRALLEVTLLIGGQWLKLYVTHLSLTPFIQS-------------IQADMI- 155

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             + +  +   P ++ GDFN             K              +   C    + R
Sbjct: 156 --LNKIIDDHHPMILLGDFNTWPQSKLWRKVTAKL------TDVSHSFRKKPCLTFPSFR 207

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            ++ +DY  +                  +  ++ +     SDH P+     F
Sbjct: 208 PRVRLDYIFIS------------HHFHISSAEVITEDPAASDHLPLIATLKF 247


>gi|284034341|ref|YP_003384272.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813634|gb|ADB35473.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 272

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 91/310 (29%), Gaps = 64/310 (20%)

Query: 7   LALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           LA V  ++P  A+ +     + + ++++NI+  +  +GV            D   +    
Sbjct: 12  LAGVLMVLPTAAAASPRSDDRTLTVITYNIHHGAGVDGVL-----------DLERIATVI 60

Query: 62  KNLDADIVFLQEMGSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           +   A +V LQE+ ++        +  A +  +      Y+    +           +  
Sbjct: 61  EKSGAGVVGLQEVDNHWSERSNWVDQAAWLARRLKMHYRYAPNLDLPPLNPGEPRRQY-G 119

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            A+  +      ++  L  A         R      V++ G+++   + HL         
Sbjct: 120 TAILSRYPIKDFRNTLLPKAP----AGEQRGLAVATVKVRGQELRFANTHLTH------- 168

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 + +   +QAQ + + +     S  P ++ GD N                     
Sbjct: 169 -----NNNAERLEQAQKVVEVL---AGSKQPTLLVGDLNAAATTPEIQKLTAIW------ 214

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +P+      N          IDY +              +                S
Sbjct: 215 RDTWPQVGVGPGNTISAENPTARIDYLLHSAALRPTSASVPATL--------------AS 260

Query: 294 DHCPISIDYD 303
           DH P+   + 
Sbjct: 261 DHLPVVATFT 270


>gi|254469887|ref|ZP_05083292.1| exodeoxyribonuclease III [Pseudovibrio sp. JE062]
 gi|211961722|gb|EEA96917.1| exodeoxyribonuclease III [Pseudovibrio sp. JE062]
          Length = 260

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 86/303 (28%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWNIN                   +    + ++ +    D+   QE+ S +     
Sbjct: 1   MKIASWNING----------------VKARLETVLKWLEEEQPDVACFQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + ++           +A+  K              +D  +R    
Sbjct: 41  ------NFPRAPFEELGYNLETHGQKGFNGVAILSKRPFEEVNRRLPGDEQDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E ++  N + I V  ++L +   +++ +  Y        +    L     ++ E   
Sbjct: 92  --IEAVIAGNNEPIRVGCLYLPNGNPVETEKFPYK------LRWMDRLHKHAEKQLEKEE 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
            F++ GD+N      +           +             N       +  +S      
Sbjct: 144 AFLLVGDYNVIPEPEDAKKPEAWVGDALFRPESRQRFRALLNLGFTEAVRATNSNAGTYT 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A + +            D      ++ SDH P+ +
Sbjct: 204 FWDYQAGAWQRDNGIRIDHLLLSPEAARIMQGVGI-------DKHVRGWEKPSDHVPVWV 256

Query: 301 DYD 303
           +  
Sbjct: 257 ELS 259


>gi|83815707|ref|YP_446788.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Salinibacter ruber DSM 13855]
 gi|83757101|gb|ABC45214.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Salinibacter ruber DSM 13855]
          Length = 320

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 88/310 (28%), Gaps = 47/310 (15%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-- 75
            +    + + ++NI  LS                ++      Y +    DIV LQE+   
Sbjct: 10  TTRPDTLTVTTYNIGYLSGMRNNEPVVRPDSLFHANMDQAAGYLRAAAPDIVALQEIDFG 69

Query: 76  -----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI-------AVRKKNVRV 123
                  + +  +  +  +                                AV  +    
Sbjct: 70  GARAAHVHQLDTLAARLGYPGAAQAVNWDERYLPFPYGRPAVHFGRTLSGQAVLSRFPVR 129

Query: 124 LQQSYPLLGAKDSFSRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                 L      F R     +R A   +V+++G+ + V+++HL++F             
Sbjct: 130 RHVRRTLPRPPQPFFRDAFYLDRLAQVGVVDVDGRPLAVINVHLEAFDVG---------- 179

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSL 234
                 QA+ + D   +  +  +P ++ GDFN  ++           D   + I     L
Sbjct: 180 --TRETQARVVNDLYRRLADRGIPTLLLGDFNSSLSSGEEGGQAGAEDATMQHILAGTDL 237

Query: 235 IRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                   +   +           ID+       ++ +  + +                 
Sbjct: 238 RSAVNTASADTASATYPADAPARTIDHIFYPPQFFEAVDTQRWCGRPAP----------P 287

Query: 293 SDHCPISIDY 302
           SDHC ++   
Sbjct: 288 SDHCAVTAAL 297


>gi|226944961|ref|YP_002800034.1| exonuclease III [Azotobacter vinelandii DJ]
 gi|226719888|gb|ACO79059.1| exodeoxyribonuclease III [Azotobacter vinelandii DJ]
          Length = 270

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 79/312 (25%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLSALIDKHRPDVIGLQETKVADE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  +   +  Q     G  D    +  R
Sbjct: 41  ------QFPLEQIGELGYHVHYHGQKGHYGVALLSRQPPLEVQK----GFPDDGEDSQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G+ + V++       F       +       ++    L+  +  + +   
Sbjct: 91  FIWGVYADAAGQPVTVMN-----GYFPQGESRAHPLKFPAKTRFYADLQALLESRFDPGQ 145

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
           P  + GDFN                               ++   +        F +   
Sbjct: 146 PLALMGDFNIAPEDSDIGIGAENARRWLRTGKCSFLPEEREWMARLKDWGLQDSFRELHP 205

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             C+       +             ID  +  +     L          + D       +
Sbjct: 206 QACDRFSWFDYRSRGFEDDPRRGLRIDLILTSRALRPRLRAA-------DVDYELRAMDK 258

Query: 292 LSDHCPISIDYD 303
            SDH P+ ++ D
Sbjct: 259 PSDHAPVWLELD 270


>gi|319954572|ref|YP_004165839.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
 gi|319423232|gb|ADV50341.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
          Length = 279

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 86/310 (27%), Gaps = 43/310 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           + K V  L+           Q   ++S+NI      +G + W             +    
Sbjct: 1   MMKLVNFLLTIFCFSAMGYGQVTSIMSYNIRLDVASDGENAWPLRK-------DFVIDQL 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           K    DI  +QE               +             +   +   ++AI       
Sbjct: 54  KFYSPDIFGIQEGTPQQTAYLAAQLKDYKFI-------GVGRDGGDKGEYSAIFYNSSQF 106

Query: 122 RVLQQSYPLLGAKD-----SFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLE 174
            V +++   L          +  A NR     L       +K WV + HL          
Sbjct: 107 TVAEENTFWLSETPTEVSMGWDAACNRVCTYGLFTNKDTKEKFWVFNTHLDHKG------ 160

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                     +Q  Q + + I +      P V+ GDFN +             ID  +  
Sbjct: 161 ------ARARAQGVQLILNKIKEVNTKDYPVVLTGDFNLEPTDEVIATVKNVLIDAKEVA 214

Query: 235 IRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                  +   NA K     K  IDY  +             +   Y         K  S
Sbjct: 215 HL-TFGPEGTFNAFKFTTAVKRRIDYIFI--------APNQVNVTKYAVLSDSKDLKYPS 265

Query: 294 DHCPISIDYD 303
           DH P+ I+++
Sbjct: 266 DHLPVYIEFE 275


>gi|328949215|ref|YP_004366552.1| Endonuclease/exonuclease/phosphatase [Treponema succinifaciens DSM
           2489]
 gi|328449539|gb|AEB15255.1| Endonuclease/exonuclease/phosphatase [Treponema succinifaciens DSM
           2489]
          Length = 333

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 90/320 (28%), Gaps = 33/320 (10%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS--------VKRTTSDYTLL 57
           +  L      C  S   +V++ +WN+ T  +        +          +        L
Sbjct: 16  LWILFLPFFACCDSGKSEVKIANWNVQTFFDANNDGTEYSEFAKSKTWGEEMYKERLKRL 75

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               K LDADI  ++E+ + N +  +   N     ++  ++  ++    N        V 
Sbjct: 76  CSVIKKLDADIFIMEELENSNVLFDI--SNFLAGEWNPRKIYRYACFSKNEGGAIGCGVL 133

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +        + L    ++      R   ++ +++  K + +   H KS    +     +
Sbjct: 134 SRIPLQKMNLHSLDIRTENEKMPRTRPLSKIEIKLKEKTLSIFVNHWKSKSGGEEKTEKW 193

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------LGNNDDFWKTID 229
                 +      L  +++            GDFNR IN         +       K + 
Sbjct: 194 RNREECV------LSFFMSHALNEGKAVFAVGDFNRDINDFCVKKNGNVLLRAWHGKLLG 247

Query: 230 PNDSL----IRFPKEKDSRCNANKNLRNKIPIDYFVMDQ-----NAYKFLIQESFSEILY 280
               L         E      +         ID           + +        +E   
Sbjct: 248 DEGLLVKSTWFDENENLIEPGSYYFREEWSRIDNIFYSGKIEVEDFFPATEGFWCNENSI 307

Query: 281 NEDDIKSRGKRLSDHCPISI 300
                   G+  SDH P+  
Sbjct: 308 PYKYSLWNGRGYSDHLPLVC 327


>gi|260776998|ref|ZP_05885892.1| putative phospholipase C [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606664|gb|EEX32938.1| putative phospholipase C [Vibrio coralliilyticus ATCC BAA-450]
          Length = 441

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 88/297 (29%), Gaps = 36/297 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                   ++L+++NI  L                   Y L+ +Y K    D++ LQE+ 
Sbjct: 170 TVEPDENTLKLMTYNIWALPVIASHIGD---------RYALIPEYVKGY--DVLALQEVF 218

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           +      +        + +     +             I  R   V   Q  +P     D
Sbjct: 219 ASGREEFLRELAKEYPYQTKMLDKDGINIYDGG---VTIVSRYPIVNQAQYVFPDCTGTD 275

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            F+           V   GK   V   H  SF    + +           +Q + L   +
Sbjct: 276 CFADK---GVNYAEVIKGGKAYHVFATHTASFDTDTARDYRQRQ-----FKQIRELATLL 327

Query: 196 TQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251
                S    V +GDFN     + G+       +   +    +    +S  +   N    
Sbjct: 328 N--IPSNETVVYSGDFNVNKRKFPGDYQQMIANLSAIEPQ--YSGYTESTFDPRINDFAG 383

Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  N   +DY ++          ++  ++  + D+   +   LSDH P+S   
Sbjct: 384 EAMSGGENVEYLDYVMVSDEYAVKAFNDNRVDVPRSTDERLWKHYNLSDHFPVSAVI 440


>gi|196230561|ref|ZP_03129423.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus
           Ellin428]
 gi|196225491|gb|EDY19999.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus
           Ellin428]
          Length = 303

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 103/315 (32%), Gaps = 31/315 (9%)

Query: 1   MIRKYVLALVFFL-VPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNS---VKRTTSD 53
           M    + AL+  + +P  A  A     V + ++N+     +E V+          ++  +
Sbjct: 1   MRFPRLFALLLAVRLPLAALGADQPPSVVIATYNVENYLGEESVAADTGPRKAKLKSEKE 60

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
              + +  K+++ DI+ + EMG               +  +     +     + ++    
Sbjct: 61  IDAVVRVVKDINPDILGICEMGEPERFEDF----KKRLADAGLHYTDFEYVQALDNQRH- 115

Query: 114 IAVRKKNVRVLQQSYPLLGAK-DSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLD 171
           +A+  +   V +QS   +  +         R  +++ +EI  G ++  +  HLKS   + 
Sbjct: 116 LALVSRYPIVARQSLSNVSYELAGQPEKVRRGFLDVTIEIRPGYQVRFVSAHLKSKLPVP 175

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                      +   +A  L+  + +    +  V  V  GDFN   N    ++       
Sbjct: 176 EG------EALVRRNEASLLRKHLDEILVADPNVRLVCFGDFNDLKNEPAYHEVAG-VHG 228

Query: 230 PNDSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           P        K++                 IDY  +    ++ +   S            +
Sbjct: 229 PTYMTALPAKDELGDTWTEYWKAADLYSRIDYIFVSPVLHREISPGSPRV------YRSA 282

Query: 288 RGKRLSDHCPISIDY 302
                SDH P+    
Sbjct: 283 YWNDASDHRPVYATI 297


>gi|21232876|ref|NP_638793.1| hypothetical protein XCC3447 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767053|ref|YP_241815.1| hypothetical protein XC_0717 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21114707|gb|AAM42717.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572385|gb|AAY47795.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 288

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 84/285 (29%), Gaps = 35/285 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R++S+N+        V +  +  KR  +    +    K    D+   QE+ S  A   
Sbjct: 34  PLRVMSFNVR-------VPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSEQAGYL 86

Query: 83  VFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                 +  F    R  +  +      D  T   V   N  +     P +    ++    
Sbjct: 87  AAQLPNYRWFGQGRRGDDSDEHMGVFYDTRTLNVVESGNFWL--SDTPEVAGSITWGNVL 144

Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R     L E   + ++ ++ + H                        A+ +   I Q  
Sbjct: 145 PRMVTWALFERRSDKRRFYLFNTHFPY----------RDEDEPAREHSARLILSRIAQ-L 193

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            + +P V+ GDFN   +           +  +       +        + +      ID+
Sbjct: 194 PADIPVVLTGDFNSDPD--KITYPTLTAVLGDARARAPKRSGPENTFQDFSTHPTRRIDW 251

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +              +   +   D +  G   SDH P+  ++ +
Sbjct: 252 ILFRG----------LTPTQFTTLDDRPGGVLPSDHYPVLAEFAW 286


>gi|222110327|ref|YP_002552591.1| exodeoxyribonuclease iii xth [Acidovorax ebreus TPSY]
 gi|221729771|gb|ACM32591.1| exodeoxyribonuclease III Xth [Acidovorax ebreus TPSY]
          Length = 258

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 86/301 (28%), Gaps = 70/301 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WNIN+LS                     +  + +    D + LQE+       K+  
Sbjct: 3   IATWNINSLS----------------VRLPQVLAWLEANPVDAIGLQEL-------KLVD 39

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +      +       +         +  +A+  +          + G  D  +R      
Sbjct: 40  E---KFPHDAFEAAGYHAVCFGQKTYNGVAILSRTPLRDVVRN-IPGHGDEQAR-----V 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   ++     + +++ +  +     + + +Y           + L+DW+  +  +    
Sbjct: 91  IAATLDTPEGPLRLVNCYFVNGQAPGTEKFSYK------LLWLEALRDWLRTELAAHPRL 144

Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+ GDFN       + D                 ++ +        F +  D    +   
Sbjct: 145 VLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERQHFQDLLGLGLTDAF-RLFDQPEKSYSW 203

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ++          ID+ ++       +            D    +  + SDH P+ + 
Sbjct: 204 WDYRMLGFQKNRGLRIDHILVSTALRPSVTAC-------RIDRAPRKNPQPSDHAPVVVS 256

Query: 302 Y 302
            
Sbjct: 257 L 257


>gi|123968077|ref|YP_001008935.1| exodeoxyribonuclease III [Prochlorococcus marinus str. AS9601]
 gi|123198187|gb|ABM69828.1| exodeoxyribonuclease III [Prochlorococcus marinus str. AS9601]
          Length = 281

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 63/301 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   +  + +  +    + DI+ LQE    +       
Sbjct: 3   IATWNVN----------------SIRTRLSQILDWINKSNPDILCLQETKVVDD------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                        + +S        +  +A+  K      +     G  D+         
Sbjct: 41  ----NFPIEAFEKLGYSVEIYGQKSYNGVAIISKIKPENVKKG-FYGCNDTNQNIEIFLD 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + L+  +   I ++++++ +   LDS +  Y             L  ++  +++     
Sbjct: 96  QKRLISADINGIKIINVYVPNGSSLDSSKFEYK------INWLNCLASFLDDQEKKGALI 149

Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPND-------SLIRFPKEKDSRCNANKNL 251
            + GDFN   + L  +D            I+ +         LI   +  +         
Sbjct: 150 CLMGDFNVAPSNLDIHDPKKYEGGIMASEIERSALNNVLKKRLIDSFRIYEQNTGHWSWW 209

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+  + +     L            D       R SDH P+ ID 
Sbjct: 210 DYRNNAFELNKGWRIDHIYISKELSSKLKSCVI-------DSCPRGNLRPSDHAPVMIDL 262

Query: 303 D 303
           +
Sbjct: 263 N 263


>gi|319639504|ref|ZP_07994253.1| exodeoxyribonuclease III [Neisseria mucosa C102]
 gi|317399270|gb|EFV79942.1| exodeoxyribonuclease III [Neisseria mucosa C102]
          Length = 256

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 88/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++ +  +  ADI+ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRLPQVQNWLADHQADILALQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRHEPQDVH-----CGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++++  +   LDS +  Y        Q    L +++  +  +  
Sbjct: 90  RVIAATIN----GVRVINVYCVNGEALDSPKFQYKE------QWFAALTEFVRAEMAAHP 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          K         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRKVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +        L   +        D      +R SDH P+ 
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILTSPELAANLTDVTV-------DLETRAQERPSDHAPVI 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|298375899|ref|ZP_06985855.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298266936|gb|EFI08593.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 287

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 95/313 (30%), Gaps = 41/313 (13%)

Query: 2   IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           +++ +L L+  L       A    +K+ ++S+NI   +  +  + W     +   D+   
Sbjct: 1   MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQW-----KFRRDFA-- 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               K  +AD+   QE+ +      +     +                +           
Sbjct: 54  ADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175
            K+             K  +  A  R A   +++    GKK + L+ HL         + 
Sbjct: 114 DKSGNFWLAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPN 231
                 SL+ +QA+ L           +P ++ GDFN   +             + +  +
Sbjct: 169 ARHEGASLVLEQAKKL--------SENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHS 220

Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            ++  F    +   +         +  IDY  +  N            + +         
Sbjct: 221 RTIAGFIYGPEWTFHDFGKIPYDKREWIDYIFVKGN---------IKVLRHGVLTETLNN 271

Query: 290 KRLSDHCPISIDY 302
              SDHCP+    
Sbjct: 272 LFPSDHCPVISTL 284


>gi|188990144|ref|YP_001902154.1| hypothetical protein xccb100_0749 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167731904|emb|CAP50088.1| putative exported protein [Xanthomonas campestris pv. campestris]
          Length = 288

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 85/285 (29%), Gaps = 35/285 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R++S+N+        V +  +  KR  +    +    K    D+   QE+ S  A   
Sbjct: 34  PLRVMSFNVR-------VPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSEQAGYL 86

Query: 83  VFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                 +  F    R  +  +      D      V   N  +     P +    ++    
Sbjct: 87  TAQLPNYRWFGQGRRGDDSDEHMGVFYDTRALNVVESGNFWL--SDTPEVAGSITWGNVL 144

Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R     L E   + ++ ++ + H       D  E     S  L+  +   L        
Sbjct: 145 PRMVTWALFERRSDKRRFYLFNTHFPYR---DEDEPARERSARLILSRIAQL-------- 193

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            + +P V+ GDFN   +           +  +       +        + +      ID+
Sbjct: 194 PADIPVVLTGDFNSDPD--KITYPTLTAVLGDARAKAPKRSGPENTFQDFSTHPTRRIDW 251

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +              +   +   D +  G   SDH P+  ++ +
Sbjct: 252 ILFRG----------LTPTQFTTLDDRPGGVLPSDHYPVLAEFAW 286


>gi|120610134|ref|YP_969812.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1]
 gi|120588598|gb|ABM32038.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1]
          Length = 258

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 88/303 (29%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+LS                     +  +  +   D + LQE+       K+
Sbjct: 1   MKLATWNVNSLS----------------IRLPQVLAWLADNPVDAIGLQEL-------KL 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +       +         +  +A+  +          + G +D+ +R    
Sbjct: 38  VDE---KFPHDAFESAGYHAVSFGQKTYNGVAILSRTPVRDVVRN-IPGHEDTQAR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++     +  ++ +  +     + +  Y             L  W+ ++  +  
Sbjct: 90  -VIAATLDTPQGPLRFINCYFVNGQAPGTEKFAYK------MLWLAALHRWVREELLAHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN       + D                 ++++        + +  +    + 
Sbjct: 143 RLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERTHFQSLLQLGLTDAY-RMFEQPEKSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++ +     +   +        D    +  + SDH P+ 
Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSEALRGQVTACTI-------DRQPRKNPQPSDHAPVV 254

Query: 300 IDY 302
              
Sbjct: 255 ATL 257


>gi|262198203|ref|YP_003269412.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
 gi|262081550|gb|ACY17519.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
          Length = 1075

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 91/331 (27%), Gaps = 47/331 (14%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDAD 67
            P   +V    ++ S+N+      +G      + +              +      LDAD
Sbjct: 623 TPAPGAVGGSFKVASFNVLNYFNGDGQGGGFPTARGADTAAEFVRQRDKIISALVALDAD 682

Query: 68  IVFLQEMGSY-----NAVAKVFPKNTWC--IFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           ++ L E+ +      +A+A +            S + +     +  ++ I      R + 
Sbjct: 683 VIGLMEIENDGYSSLSAIADLTAGLNAALPAGESYDFVDPGVSQIGSDAIAVGYLYRTQT 742

Query: 121 -VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCF-----LDS 172
              V   +         F    NR A+    E   +G++  +   HLKS         D 
Sbjct: 743 AGLVGASAILDSSVDPRFDDTKNRPALAQTFEELASGERFTIAVNHLKSKGSSCDSLGDP 802

Query: 173 LENTYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                  +C+   +  A+ L DW+           F+I GD N               + 
Sbjct: 803 DTGDGQGNCNLTRTAAAEALADWLGTDPTSSGDDDFLIIGDLNAYAMEDPI-----AALQ 857

Query: 230 PNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                        +    +         +DY + +      +       I  +E      
Sbjct: 858 AGGYTDLADAFIGADVAYSYIFDGQAGYLDYALANDALLAQVTGVHEWHINTDEPIALDY 917

Query: 289 G-----------------KRLSDHCPISIDY 302
                              R SDH P+ I  
Sbjct: 918 NVEFKSPGQIDSLYDDGPYRASDHDPVVIGL 948


>gi|327273914|ref|XP_003221724.1| PREDICTED: nocturnin-like [Anolis carolinensis]
          Length = 375

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 92/301 (30%), Gaps = 22/301 (7%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
             +A   Q +R++ WNI    L E ++          R      L+ +       DI+ L
Sbjct: 78  TNSARRHQPIRVMQWNILAQALGEGKDNFIQCPMEALRWEERKCLILEEILAYQPDILCL 137

Query: 72  QEMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           QE+  Y +    +  +  +   +  +          +N     A+   K    +++ +  
Sbjct: 138 QEVDHYFDTFQPLLSRMGYQCTFLPKPWSPCLDVECNNGPDGCALFFLKDRFSLVKSTNI 197

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-A 188
            L A    +      A  L      +   +   HLK+           +        Q A
Sbjct: 198 RLTAMKLKTN-QVAIAQILKCNETDRLFCIAVTHLKA----------RNGWERFRYAQGA 246

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L++      E+ +P ++ GDFN         +    +++ N +      +  S     
Sbjct: 247 DLLENLKRITHEAEIPLIVCGDFNADPTEEVYKEFSTSSLNLNSAYKLLSADGLSEPPYT 306

Query: 249 KNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        +DY    Q+A K     S         +        SDH  +  D+ 
Sbjct: 307 TWKIRPSGECRHTLDYIWYSQHALKVDSALSLLTEEQIGPNRLPSFNYPSDHLSLVCDFT 366

Query: 304 F 304
           F
Sbjct: 367 F 367


>gi|289432089|ref|YP_003461962.1| endonuclease/exonuclease/phosphatase [Dehalococcoides sp. GT]
 gi|288945809|gb|ADC73506.1| Endonuclease/exonuclease/phosphatase [Dehalococcoides sp. GT]
          Length = 639

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 54/288 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P        +R++++N++     +G             D   L +  ++  AD+V LQE+
Sbjct: 403 PSPPQFEGSLRIMTYNLHNGFNTQG-----------KLDMEALARVIEDSGADVVALQEI 451

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                ++       W     ++RL  +S   +    +   A+  K   +   +  L    
Sbjct: 452 SRGWVISGRVDMLEWL----SQRLNMYSAFGATAGEYWGNAILSKYPILDTHNISLESEG 507

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  +  ++++ G+ +++   HL                  +   QA  L D+
Sbjct: 508 LPIK----RGYLNAVLDLGGRYLYLAATHLHHVPEEGD----------VRLIQAGELADF 553

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                 +    +I GDFN + +           +           E  +      +    
Sbjct: 554 WDNAPAT----IILGDFNAEPDSEEIGLLRQAGLSD-------SLEGQTSVLTYHSADLY 602

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             IDY        +++   +   +              SDH  I  D 
Sbjct: 603 QRIDYIWASPEI-EYIDSYTIVSL-------------ASDHLAIIADI 636


>gi|323490963|ref|ZP_08096158.1| endonuclease yhcR [Planococcus donghaensis MPA1U2]
 gi|323395443|gb|EGA88294.1| endonuclease yhcR [Planococcus donghaensis MPA1U2]
          Length = 1164

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/324 (11%), Positives = 92/324 (28%), Gaps = 59/324 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGSYN- 78
           +K+ + ++N+   S         +    + +    + + +  +L+  DI+ + E+   + 
Sbjct: 680 EKLTVAAYNVENFSA--------DPNHTSDAKAQRIAESFVNDLNSPDIIVMVEVQDNDG 731

Query: 79  -----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                            A  +     T+          N        +I        + V
Sbjct: 732 PITSGNSDATASYERLIAGIQAAGGPTYEW-TDIAPEYNQDGGQPGGNIRVGYLYNPERV 790

Query: 122 RVLQQSYPLLGAKDSFSRAG---------------NRRAVELLVEINGKKIWVLDIHLKS 166
            + + +       +S+                    R+ +    +  G+++ V+  HL S
Sbjct: 791 ILSEGTKGTATETNSWVDGELALNPGRVQPIAMPNTRKPIAAQFDFQGEQVVVIGAHLNS 850

Query: 167 FCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGN 220
                 L     P    S     + A  +  +I +  ++   +  ++AGD N        
Sbjct: 851 KGGDQPLFGKNQPPFFGSVEERIELATAINGFIAEGLEQNPDLNVIVAGDMNDF-----E 905

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                + +  +    +          +     N   +D+ ++  N  +    +       
Sbjct: 906 FTPALQALKGDILTNKVEDVPLEDRYSYYYQGNSQVLDHLLVTNNLAQRTELDMVHI--- 962

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
                     R SDH P+     F
Sbjct: 963 -NAMFMEEHGRASDHDPLLAQISF 985


>gi|148230108|ref|NP_001079281.1| nocturnin [Xenopus laevis]
 gi|6093516|sp|P79942|NOCT_XENLA RecName: Full=Nocturnin; AltName: Full=Rhythmic message 1;
           Short=RM1
 gi|1755150|gb|AAB39495.1| nocturnin [Xenopus laevis]
          Length = 388

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 95/300 (31%), Gaps = 22/300 (7%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            ++   +  R++ WNI    L E ++   +      +      L+ +       D++ LQ
Sbjct: 92  SSSQQPRTFRVMQWNILAQALGEGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQ 151

Query: 73  EMGSY-NAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+  Y +    +  +  +   F +           +N     A+   +   +++  +   
Sbjct: 152 EVDHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFQLVNSAKIR 211

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L A+   +      A  L     G+++     HLK+           +        Q   
Sbjct: 212 LSARTLKTN-QVAIAETLQCCETGRQLCFAVTHLKA----------RTGWERFRLAQGSD 260

Query: 191 LKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           L D +    + + VP +I GDFN              +++ N +     ++ +S      
Sbjct: 261 LLDNLESITQGATVPLIICGDFNADPTEEVYKRFASSSLNLNSAYKLLSEDGESEPPYTT 320

Query: 250 NL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   +   +DY    Q+A +               +        SDH  +  D+ F
Sbjct: 321 WKIRTTGESCHTLDYIWYSQHALRVNAALGLPTEEQIGPNRLPSFNYPSDHLSLVCDFSF 380


>gi|241765066|ref|ZP_04763058.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN]
 gi|241365303|gb|EER60125.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN]
          Length = 258

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 82/302 (27%), Gaps = 70/302 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L +WNIN+LS                     +  +      D + LQE+   +       
Sbjct: 3   LATWNINSLS----------------VRLPQVVAWLAANPVDALCLQELKLTDD------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                  ++  +   +         +  +A+  ++                       R 
Sbjct: 41  ----KFPFAALQEAGYHAVAMGQKTYNGVAILSRSPLRDVVRNI------PGHDDQQARV 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   ++     + +++ +  +     S +  Y        +  Q L DW+  +  +    
Sbjct: 91  IAATMDTATGPVRLVNCYFVNGQEPGSEKFAYK------MRWLQALHDWLRTELAAHPRL 144

Query: 206 VIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNANKN 250
            + GDFN       + D                 ++ +        + +  +    A   
Sbjct: 145 ALLGDFNVAPEDRDSYDPVGLRETIHHTTEERAHFQALLALGLTDAY-RMFEQPEKAYSW 203

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ++          ID+ ++ +     +   +        D    +  + SDH P+   
Sbjct: 204 WDYRMLGFQKNRGLRIDHILVSEALRGTVKACTI-------DRAPRKNPQPSDHAPVVAT 256

Query: 302 YD 303
            D
Sbjct: 257 LD 258


>gi|39935926|ref|NP_948202.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009]
 gi|39649780|emb|CAE28302.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009]
          Length = 303

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 95/311 (30%), Gaps = 67/311 (21%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +R+ +WN+N                        L  + ++   D+V LQE+ 
Sbjct: 33  SSRATDGAMRIATWNVN----------------SVRQRLDHLVSWLQDCQPDVVCLQEI- 75

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               V + FP+            + ++           +A+  K               D
Sbjct: 76  --KCVDEAFPRE-------PIEALGYNVVTHGQKTFNGVALLSKYPLEEANPGLAGDESD 126

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             +R      +E +V +    + V  ++L +   + S +  Y  S          L+D+ 
Sbjct: 127 VHARF-----LEGVVSLKHGVVRVACLYLPNGNPVGSEKYPYKLS------WMARLRDYA 175

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKE 240
            Q+ ++  P ++AGDFN        ++                 ++T+            
Sbjct: 176 QQRLKTEEPLILAGDFNVIPQAEDVHNPAAWTEDALFRPETRESFQTLLGLGLTDALRAT 235

Query: 241 KDSRCNANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            D+                   I ID+ ++   A   L            D      ++ 
Sbjct: 236 TDAPGQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGI-------DSYVRNWEKP 288

Query: 293 SDHCPISIDYD 303
           SDH P+  D+D
Sbjct: 289 SDHVPVWADFD 299


>gi|289208245|ref|YP_003460311.1| endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
 gi|288943876|gb|ADC71575.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
          Length = 554

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 95/298 (31%), Gaps = 30/298 (10%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77
           +    +R+ + N+       G     +  +R   +   L    + L AD++   E+ +  
Sbjct: 270 AADGALRIATANLENDFVTLGERGASSRAERVRQE-AKLNTALRPLKADVITTIELENRP 328

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A  ++  +       + + + + +     + I   ++ R   + +L             
Sbjct: 329 AARERLIERLNQHGDITYQAVRHPAPGT--DAIKVGMSYRPDRLELLDAVAD-------G 379

Query: 138 SRAGNRRAVELLV-EINGKK---IWVLDIHLKSFCFLDSLENTYSP-SCSLLSQQAQWLK 192
            R  +R  +      ++G+    I  +    KS C      +          + QA+ L 
Sbjct: 380 DRVHHRPPLLAWFGTLDGEPLFGIVAVHFKAKSGCPSSGDIDRGQGCWNERRTAQAERLA 439

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
            WI Q++   +P +IAGD N               +            +  +  +     
Sbjct: 440 QWIEQERRDGLPVIIAGDLNAYAAEDPLR------LLREAGKRDLVHAEPDQAYSYVFRG 493

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------KRLSDHCPISIDY 302
               +DY +  ++  + + +     I  +E                R SDH P+ +D 
Sbjct: 494 QSGQLDYLLGPRDLEERVGKAGSWAINADEPAFLGFDGSQPAEGPWRASDHDPVWLDL 551


>gi|302383396|ref|YP_003819219.1| endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194024|gb|ADL01596.1| Endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 245

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 87/283 (30%), Gaps = 43/283 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+++N++     +              D   +       D DIV LQE+    A    
Sbjct: 1   MRLLTYNVHRCVGVDR-----------RLDVERIVGVIAEHDPDIVCLQELDVGRARTGG 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +           +  H+      + +   A+  +    L +   L   K        R
Sbjct: 50  VDQARVIADRLAMSVRFHAAMTVEQEEY-GDAILTRCPERLIRVGALPTVKGIPG-LEPR 107

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-DWITQKKES 201
            A+ + VE  G   + VL  HL                      QA  L         E 
Sbjct: 108 GAIWIRVEKPGCPPLNVLTTHLGLVP-------------REQRLQAAALAGKDWMGHAEC 154

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++AGDFN             +T+  + +  +    +        +    I ID+  
Sbjct: 155 QGPTILAGDFNATSITRPY-----QTLTRHLADCQRQIGQKPTIKTFPSGFPAIRIDHVF 209

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +  +     ++ +F              +  SDH P+ +D++F
Sbjct: 210 VSPHIRVTGVRAAF----------SPLARMASDHLPLIVDFEF 242


>gi|261381264|ref|ZP_05985837.1| exodeoxyribonuclease III [Neisseria subflava NJ9703]
 gi|284795738|gb|EFC51085.1| exodeoxyribonuclease III [Neisseria subflava NJ9703]
          Length = 256

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++ +  +  ADI+ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRLPQVQNWLADHQADILALQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +                +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRYEPQDVH-----CGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++++  +   LDS +  Y        Q    L +++  +  +  
Sbjct: 90  RVIAATIN----GVRVINVYCVNGEALDSPKFQYKE------QWFAALTEFVRTEMAAHP 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          K         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRKIHPEDAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +        L   +        D      +R SDH P+ 
Sbjct: 199 TWFDYRGGMFQRKLGLRIDHILTSPELAATLTDVTV-------DLETRAQERPSDHAPVI 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|270295842|ref|ZP_06202042.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273246|gb|EFA19108.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 287

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 77/294 (26%), Gaps = 37/294 (12%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A   + V ++S+NI   + ++ +  W+    R            +  D DI+  QE+   
Sbjct: 23  APAPEPVNVMSFNIRYDNLEDSLDNWQYRKDRA-------ANAIRFYDVDILGTQEVLHN 75

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                      + +              S             +        P +     +
Sbjct: 76  QLEDLKQRLPEYGVIGVGREDGKEKGEYSALWYKKDRFNLLDSGYFWLSETPEVAGSKGW 135

Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             A  R A    +  +++GK+ + L+ HL                 SL+  +   L    
Sbjct: 136 DGACERIASWAKLQDKVSGKEFFALNTHL-----DHVGVAARREGISLMLDKVNEL---- 186

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNL 251
                  +P V+ GDFN                 + +                 +    +
Sbjct: 187 ----SGNLPVVVTGDFNASPESDVIKHVTDPSNPEHLTDARQASAIVYGPAWSFHDFGKI 242

Query: 252 RNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY  +               + Y           LSDH PI +  +
Sbjct: 243 PYDKRPLIDYVFVRNGL---------KVLRYGVLAETENNAFLSDHAPILVTVE 287


>gi|284992404|ref|YP_003410958.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
 gi|284065649|gb|ADB76587.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
          Length = 271

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 90/293 (30%), Gaps = 57/293 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------S 76
            VRLV++N +     +G             D   L       DAD++ LQE+       S
Sbjct: 19  PVRLVTFNTHHGVGDDG-----------RHDLPRLATVLAAADADLICLQEVDRHFGGRS 67

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +    +       +  +    I+  +RD         A+  +   ++   +PL G+   
Sbjct: 68  EDVDQALLLSRALDMQLAWGPAIDEPRRDEGLRRQYGNALLSRLPVLISDVHPLPGSG-- 125

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R A+  +VE++G  +WV   HL +                  ++Q   +    T
Sbjct: 126 ----EPRSALRTMVELDGAALWVTTTHLSTCSP------------EERAEQIAAIAQLHT 169

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN------ANKN 250
           +  E+    V+ GDFN             +  D  +           R         +  
Sbjct: 170 EPMETG---VLVGDFNADPRAPELARLTGRFTDAWELAPDREDRAGWRFWQARRGGTHPA 226

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            R    ID   +       +       +          G   SDH P+ +D +
Sbjct: 227 RRPHRRIDQVWVSPG----VGVSRAHVL---------DGAGASDHLPLVVDLE 266


>gi|229154378|ref|ZP_04282498.1| Sphingomyelinase C [Bacillus cereus ATCC 4342]
 gi|228629202|gb|EEK85909.1| Sphingomyelinase C [Bacillus cereus ATCC 4342]
          Length = 338

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 102/320 (31%), Gaps = 44/320 (13%)

Query: 17  TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +++ A         +++++ N+  LS      L+ N  +   +D      Y K  + D++
Sbjct: 28  SSAQADTSTNQNNILKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVI 81

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120
            L E+   +A  ++           T         E         S+      +A+  K 
Sbjct: 82  ILNEVFDNSASDRLLGNLKREYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 141

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             + +  Y +           N+  V   ++ N   + V+  HL++    DS+    SP+
Sbjct: 142 PIIEKIQY-VFAQGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA 197

Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234
            S+ + Q + ++D+I  +   +    +  GD N        N        +KT+  +   
Sbjct: 198 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 256

Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                             N        +DY +  ++       E+      +     +  
Sbjct: 257 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIISSKDHANPSFIENKVLQPKSPQWTVTSW 316

Query: 290 KR------LSDHCPISIDYD 303
            +       SDH P+     
Sbjct: 317 LKKYTYNDYSDHYPVEATIS 336


>gi|218658684|ref|ZP_03514614.1| putative metal-dependent hydrolase protein [Rhizobium etli IE4771]
          Length = 216

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 70/251 (27%), Gaps = 38/251 (15%)

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            +        ADI+ LQE+           +          +   H       + +   A
Sbjct: 1   RIASVIAEAGADIIALQEVDVLRRRTGGVDQAHLIASLLKMQAHFHPALSVAEEQY-GDA 59

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +         ++ PL            R A+ + V +  +K+ V++ HL           
Sbjct: 60  IITALPTAAVKAGPLPSIG------EQRGALSVEVLVGDRKLLVVNTHLGLRGRD----- 108

Query: 176 TYSPSCSLLSQQAQWLKD--WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                     +Q   L +  W+   K+  +P ++ GDFN   +           +     
Sbjct: 109 --------RIRQMTTLLNSGWLRGTKDEPLPCILCGDFNAIPSSATYR------LATRSL 154

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                  K +      +    + +D+  +  +            +           +  S
Sbjct: 155 KDALLGGKAAPRATFPSRYPLMRLDHIFVTDDL----------VVKRATVLQNRLTRVAS 204

Query: 294 DHCPISIDYDF 304
           DH P+  +  F
Sbjct: 205 DHLPLFAEISF 215


>gi|2251234|gb|AAB62717.1| probable nocturnin protein [Mus musculus]
          Length = 323

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 97/300 (32%), Gaps = 23/300 (7%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           C++S +  +R++ WNI    L E ++          +      L+ +       DI+ LQ
Sbjct: 28  CSSSHS-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 86

Query: 73  EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+  Y +    +  +  +   +  +          +N     A+   +   +++  +   
Sbjct: 87  EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIR 146

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189
           L A    +      A  L  + +G++  +   HLK+           +      S Q   
Sbjct: 147 LTAMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCD 195

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L++     + + +P ++ GDFN +            +++ N +      +  S      
Sbjct: 196 LLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSPDGQSEPPYTT 255

Query: 250 NLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 256 WKIRTSGECRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSF 315


>gi|228983878|ref|ZP_04144072.1| Sphingomyelinase C [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228775857|gb|EEM24229.1| Sphingomyelinase C [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 338

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 102/320 (31%), Gaps = 44/320 (13%)

Query: 17  TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +++ A         +++++ N+  LS      L+ N  +   +D      Y K  + D++
Sbjct: 28  SSAQADTSTNQNNILKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVI 81

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120
            L E+   +A  ++           T         E         S+      +A+  K 
Sbjct: 82  ILNEVFDNSASDRLLGNLKREYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 141

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             + +  Y +           N+  V   ++ N   + V+  HL++    DS+    SP+
Sbjct: 142 PIIEKIQY-VFAQGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA 197

Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSL 234
            S+ + Q + ++D+I  +   +    +  GD N        N        +KT+  +   
Sbjct: 198 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPS 256

Query: 235 IRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                             N        +DY +  ++       E+      +     +  
Sbjct: 257 YTGHTATWDATTNSIAKYNFPDSPAEYLDYIISSKDHANPSFIENKVLQPKSPQWTVTSW 316

Query: 290 KR------LSDHCPISIDYD 303
            +       SDH P+     
Sbjct: 317 LKKYTYNDYSDHYPVEATIS 336


>gi|332883343|gb|EGK03626.1| hypothetical protein HMPREF9456_01693 [Dysgonomonas mossii DSM
           22836]
          Length = 305

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 77/305 (25%), Gaps = 42/305 (13%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           AQ + + ++NI   ++ +      N      +   ++       D DI   QE+     +
Sbjct: 19  AQTLNVATYNIRNDNQGDA-----NKGNGWATRCPVIANLIAYNDFDIWGSQEVKHNQLI 73

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS---- 136
             +     +                +          + K   +    + +    D     
Sbjct: 74  DLLDALPQYSYVGVGRDDGKTEGEYAPI-----FFKKDKYKVLKSGHFWMAEKTDEPNKG 128

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  A  R    + ++    K+     +L               S  L+  + + +     
Sbjct: 129 WDAALPRICTWVQLKETKGKLKFWFFNLHM---DHVGVIAREESAKLVLAKIKEMC---- 181

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--NK 254
                  P ++ GDFN    +          I  +       +   +             
Sbjct: 182 ----GNDPVILTGDFNVDQTHKSYTLLSTSGILTDSYDRAAVRYALNGTFNAFKPDLLTS 237

Query: 255 IPIDYFVMDQNAYKFLIQ-------------ESFSEILYNEDDIKS--RGKRLSDHCPIS 299
             ID+  +  +                     +     + ++        +  SDH P+S
Sbjct: 238 SRIDHIFVSPSMSVERYGVLTDTYRTPRDGESNIKTGDFPKEYSFDGCDIRLPSDHFPVS 297

Query: 300 IDYDF 304
           +   +
Sbjct: 298 VKLIY 302


>gi|225010308|ref|ZP_03700780.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium
           MS024-3C]
 gi|225005787|gb|EEG43737.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium
           MS024-3C]
          Length = 279

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 95/311 (30%), Gaps = 39/311 (12%)

Query: 1   MIR---KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M+R   KY+   +   +  T  VAQ + ++S+NI   S+ +G  +W             L
Sbjct: 1   MMRYTTKYLKMSLLMFLFTTVGVAQNLTVISYNIRYNSQSDGEDIWDLRKG-------EL 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                    D   +QE         +     +                S         ++
Sbjct: 54  VGQINQHSPDSFGVQEATQIQMQYILEALPEYAYVGVGRDNGATKGEYSAV-----FYLK 108

Query: 118 KKNVRVLQQSYPLLGAKDS----FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           +K   +  +++ L    +     +  A  R       + +         +        + 
Sbjct: 109 EKFKLLESKTFWLSETPEEVSVGWDAALPRICTYAQFKEHTTGRVFWHFNTHFDHVGKA- 167

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                      +  A  + + I     +   FV+ GDFN   N L          DP + 
Sbjct: 168 ---------ARANSALLIIEKIKSLVSTESVFVLTGDFNASPNELPITHLKNAFRDPLEY 218

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +     E        +   ++  IDY       ++ L   S++ +       ++ G+ +S
Sbjct: 219 IELSGPEGTFNAFNLQAPLDR-RIDYIF-----FQGLTPLSYAHLSEK----RANGRWIS 268

Query: 294 DHCPISIDYDF 304
           DH P+  D  +
Sbjct: 269 DHLPVKFDLAY 279


>gi|126653851|ref|ZP_01725711.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp.
            B14905]
 gi|126589639|gb|EAZ83777.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp.
            B14905]
          Length = 1502

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 90/327 (27%), Gaps = 61/327 (18%)

Query: 20   VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMGSY 77
               K+ + S+N+   S  +  +               L +         DIV + E+   
Sbjct: 746  ADDKLTIASYNLENFSNNKSSTTDD--------KARKLARAIGIDMKSPDIVGVTEVQDN 797

Query: 78   NAVA-----------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            N                    K      +  + + + + N      N +I          
Sbjct: 798  NGATVGDSKADQSYKRLIDAIKAAGGVDYQ-YVNIDPINNQDGGAPNANIRVGFLYNPDR 856

Query: 121  VRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
            V++ +                     P      + +   +R+ +    E  G+ + V+  
Sbjct: 857  VKLKEGLPTGNATTAVGYQDGKLTLNPGRIDPTNAAFNSSRKPLAAQFEFQGEDVVVIAN 916

Query: 163  HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE------SLVPFVIAGDFNRKIN 216
            H  S      L     P  +    Q + +   +    +           V  GDFN    
Sbjct: 917  HWNSKSGDTPLFGAIQPPQNGSEVQRKKIAQIVYDFVKDIKTNNKDANIVSLGDFNDY-- 974

Query: 217  YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                  +  K  +         K  DS         N   +D+ ++  N     + ++  
Sbjct: 975  ---QFAEALKIHEGQLMTNMINKVDDSDRYTYVYQGNSQVLDHILVSNNL----VNKTEI 1027

Query: 277  EILYNEDDIKSRGKRLSDHCPISIDYD 303
            +IL+   D      R SDH P+ +  D
Sbjct: 1028 DILHINADFTDMAGRASDHDPVMVQID 1054


>gi|91977274|ref|YP_569933.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5]
 gi|91683730|gb|ABE40032.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5]
          Length = 263

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 92/304 (30%), Gaps = 67/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  + K  + D+V LQE+     V + 
Sbjct: 1   MRIATWNVN----------------SVRQRIDHLVSWLKACEPDVVCLQEI---KCVDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + ++           +A+  K               D  +R    
Sbjct: 42  FPRE-------PIEALGYNIVTHGQKTFNGVALLSKYPLEEATPRLAGDETDVHARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V +    + V  ++L +   +++ +  Y  S          L  +  ++ ++  
Sbjct: 92  --LEGVVSLKRGVVRVACLYLPNGNPVETEKYPYKLS------WMSRLLQYSKERLKTEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGDFN         +                 ++ +             D+     
Sbjct: 144 PLILAGDFNVIPQASDVYNPAGWVDDALFRPQTRESFQALLGLGLTDALRATTDAPGQYT 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         I ID+ ++   A   L+           D      ++ SDH P+  
Sbjct: 204 FWDYQAGAWQKNWGIRIDHLLLSPQATDRLVGVGI-------DSHVRSWEKPSDHVPVWA 256

Query: 301 DYDF 304
           D+DF
Sbjct: 257 DFDF 260


>gi|225077187|ref|ZP_03720386.1| hypothetical protein NEIFLAOT_02242 [Neisseria flavescens
           NRL30031/H210]
 gi|224951478|gb|EEG32687.1| hypothetical protein NEIFLAOT_02242 [Neisseria flavescens
           NRL30031/H210]
          Length = 256

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 88/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++ +  +  ADI+ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRLPQVQNWLADHQADILALQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRHEPQDVH-----CGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATIN----GVRVINVYCVNGEALDSPKFQYKE------QWFAALTEFVRTEMAVHP 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++KT+          K         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKTLLDLGLTDSLRKVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +        L   +        D      +R SDH P+ 
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILTSPELAATLTDVTV-------DLETRAQERPSDHAPVI 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|293604886|ref|ZP_06687283.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553]
 gi|292816714|gb|EFF75798.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553]
          Length = 260

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 84/305 (27%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L+                     +  +      D++ +QE+   +     
Sbjct: 1   MKLATWNVNSLN----------------VRLPQVLDWLAANPVDVLCIQELKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  +   +    +    +  +A+  +                       +
Sbjct: 41  ------KFPEAAFKEAGYHAVWAGQKTYNGVAIVSRMPGTKMVRNI------PGHDDHQQ 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + L        + V+  +  +   LDS +  Y  +        + +++W+ ++ +   
Sbjct: 89  RVLALTFPSPEGDVRVVCAYCPNGQSLDSEKYQYKLA------WFEAMREWLAEEIKQYP 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GD+N                            + +     L    +  +    + 
Sbjct: 143 RLAVLGDYNVAPADEDVHNPEKWEGHVLVSEPERAALRALLDLG-LTDSFRLFEQPEKSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++     K  +           D    R ++ SDH P+ 
Sbjct: 202 SWWDYRQFAFRRNAGLRIDHVLLSAPLVKRCVACVI-------DKEPRRNEQPSDHAPVV 254

Query: 300 IDYDF 304
              +F
Sbjct: 255 ATLEF 259


>gi|295135375|ref|YP_003586051.1| endonuclease/exonuclease/phosphatase family protein [Zunongwangia
           profunda SM-A87]
 gi|294983390|gb|ADF53855.1| endonuclease/exonuclease/phosphatase family protein [Zunongwangia
           profunda SM-A87]
          Length = 258

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 85/288 (29%), Gaps = 40/288 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +V+L+++NI   +E +  + W             +    K  + DI  +QE         
Sbjct: 4   QVKLMTYNIKYANENDAENSWSYRKDW-------ITSQIKFYEPDIFGVQEALQVQIDYF 56

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD-----SF 137
                 +                S      AI    +  +VL+ +   L          +
Sbjct: 57  SEHMPNYKHIGVGRDDGMKKGEYS------AIFYNSEKFKVLKNNTFWLNETPTKIKKGW 110

Query: 138 SRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             A  R     L E    G+K W  + H                      + A+ + + I
Sbjct: 111 DAALPRICTYGLFENKKTGEKFWYFNTHFDHVG------------VKARQESAKLIFEKI 158

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
           T+      P V++GDFN   +         + ID   +       + +    N +     
Sbjct: 159 TELNTQDYPVVLSGDFNLMPDTKSIQYLSEQMIDAKGAADLVFGPEGTYNGFNFSEPVTR 218

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            IDY  +  N         F    Y         K  SDH P+ ++ +
Sbjct: 219 RIDYVFLSNN--------GFQVKKYAVLSDSKDLKYPSDHLPVMVELE 258


>gi|224049325|ref|XP_002191825.1| PREDICTED: CCR4 carbon catabolite repression 4-like [Taeniopygia
           guttata]
          Length = 425

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 95/300 (31%), Gaps = 24/300 (8%)

Query: 17  TASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           + S  + +R++ WNI    L E ++          +      L+ +       DI+ LQE
Sbjct: 130 STSSHRPIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYKPDILCLQE 189

Query: 74  MGSY-NAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +  Y +    +  +  +   +  +        + ++  D      ++++   V   +  L
Sbjct: 190 VDHYFDTFEPLLSRLGYQCTFFPKPWSPCLDVEHNNGPDGCAMFFLKERFELVNSANIRL 249

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189
           +  K   ++     A  L     G+   +   HLK+           +      S Q   
Sbjct: 250 MAMKLKTNQVA--IAQTLKCHETGRLFCIAVTHLKA----------RTGWERFRSAQGCD 297

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L++     + + +P ++ GDFN +       +    +++ N +      +  S      
Sbjct: 298 LLQNLKNITQGAKIPLIVCGDFNAEPTEEVYREFSNSSLNLNSAYKLLSPDGQSEPPYTT 357

Query: 250 NLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       +DY    Q+A                 +        SDH  +  D+ F
Sbjct: 358 WKIRPSGECRHTLDYIWYSQHALNVNSALGLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 417


>gi|53712613|ref|YP_098605.1| hypothetical protein BF1322 [Bacteroides fragilis YCH46]
 gi|52215478|dbj|BAD48071.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 285

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 84/316 (26%), Gaps = 43/316 (13%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M +      VF  +      +  +   R+ ++NI   +  + ++ WK            +
Sbjct: 1   MNKICFFIGVFITLLLAGCSSNPITHVRVATFNIRYDNLGDSLNSWKYRK-------EKV 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            ++ +    D++ +QE+ ++     +     +                +           
Sbjct: 54  CEFIREKHPDVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175
             +       +P    K  +  A  R A    ++    GK+  +L+ H     F      
Sbjct: 114 LDSNTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTE 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               S  L+  + + +            P ++ GDFN    +              D+  
Sbjct: 169 ARRNSALLIIDKIKEIA--------GTHPAMMTGDFNVSEEWEAYKTITSNEFVLKDAWK 220

Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
              K+                    +  ID+  +                        + 
Sbjct: 221 IAGKQSGEN---YTFHDFGRVPVAEREKIDFIFVTPQIKVA--------DAEIISSAITD 269

Query: 289 GKRLSDHCPISIDYDF 304
              LSDH     D +F
Sbjct: 270 STYLSDHNAHLADLEF 285


>gi|218258829|ref|ZP_03475089.1| hypothetical protein PRABACTJOHN_00746 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225190|gb|EEC97840.1| hypothetical protein PRABACTJOHN_00746 [Parabacteroides johnsonii
           DSM 18315]
          Length = 292

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 80/287 (27%), Gaps = 34/287 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ + ++N+   +E++GV+ W N          +++   +  D DI   QE    + +  
Sbjct: 35  ELNVATFNLRMDTEKDGVNAWPNRK-------EMVKGLIRFHDFDIFGTQEGF-KHMLDG 86

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V     +    +       +   S     T                P +  K   +   N
Sbjct: 87  VAELEGYAYIGAGRDDGEDAGEHSAIFYKTGRFDLLDKGNFWFSETPDVPGKGWDATCCN 146

Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           R           +GK  +  + H          +     S        + L   I Q   
Sbjct: 147 RICSWGKFRDKESGKVFYFFNSHY-----DHQGKVARRESS-------KLLIARIKQIAG 194

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRFPKEKDSRCNANKNLR-NKIPI 257
           +       GDFN                 +D      +     +   N+ K     K  I
Sbjct: 195 TDATVFATGDFNAVPTDEPMVTLASDGLLLDSYGLSEQPHYGTEGTYNSFKTDSEMKNRI 254

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           DY  + +               Y   +    G+  SDH P+ I   F
Sbjct: 255 DYIWVTKGT---------KVKKYAVLNDMQYGRFPSDHFPVMIQVAF 292


>gi|253563360|ref|ZP_04840817.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947136|gb|EES87418.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 285

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 84/316 (26%), Gaps = 43/316 (13%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M +      VF  +      +  +   R+ ++NI   +  + ++ WK            +
Sbjct: 1   MNKICFFIGVFITLLLAGCSSNPISHVRVATFNIRYDNLGDSLNSWKYRK-------EKV 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            ++ +    D++ +QE+ ++     +     +                +           
Sbjct: 54  CEFIREKHPDVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175
             +       +P    K  +  A  R A    ++    GK+  +L+ H     F      
Sbjct: 114 LDSNTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTE 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               S  L+  + + +            P ++ GDFN    +              D+  
Sbjct: 169 ARRNSALLIIDKIKEIA--------GTHPAMMTGDFNVSEEWEAYKTITSNEFVLKDAWK 220

Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
              K+                    +  ID+  +                        + 
Sbjct: 221 IAGKQSGEN---YTFHDFGRVPVAEREKIDFIFVTPQIKVA--------DAEIISSAITD 269

Query: 289 GKRLSDHCPISIDYDF 304
              LSDH     D +F
Sbjct: 270 STYLSDHNAHLADLEF 285


>gi|301307706|ref|ZP_07213663.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300834380|gb|EFK64993.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 305

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/326 (10%), Positives = 86/326 (26%), Gaps = 47/326 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K + + +F L    A  A+ + + ++N+   +  +  +            Y  + Q  
Sbjct: 1   MKKLIYSFLFLLCSVFALQAESMVVATYNLRNANAGDSTNGNG-----WGQRYPYIAQLI 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    DI   QE               +            +   S          ++K  
Sbjct: 56  QFHGFDIFGTQEGKYQQLQDLKNAMPGYDYIGVGRDDGKQAGEHSAIFYR-----KEKFE 110

Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +    + L    D     +     R                L  +L             
Sbjct: 111 VLDHGDFWLSTITDRPNKGWDAVLPRICTWGKFRDKQTGFTFLFFNLHM----------D 160

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS 233
                  ++ A+ +   + +     +P ++ GDFN   +        N    +       
Sbjct: 161 HIGVQARAESAKLILKKLKEF-PEKLPAILTGDFNVDQHNESYLLLDNSGIMRDSYQIAD 219

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---LIQESFS-------------E 277
               P    +  +A  + +    ID+  + +        ++ +++               
Sbjct: 220 FRYVPNGTFNAFHA--DRKTDSRIDHLFLTKEFDVKKYGVLTDTYRSEAKESAQKEQDAN 277

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
                   K   +  SDH P+ +  +
Sbjct: 278 FPKEVSMQKYVARTPSDHFPVMVVVE 303


>gi|162453061|ref|YP_001615428.1| hypothetical protein sce4785 [Sorangium cellulosum 'So ce 56']
 gi|161163643|emb|CAN94948.1| probable secreted protein [Sorangium cellulosum 'So ce 56']
          Length = 286

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 80/298 (26%), Gaps = 54/298 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79
            +R+++ NI                    +   ++R+  + LD D+V LQE+      + 
Sbjct: 25  SLRVLTLNIWN------------RHDPWEARLEVIREGLRELDPDVVGLQEVLSYEGRSL 72

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +     + + +     +               AV  +      Q++PL   +     
Sbjct: 73  ADGIADGLGYEVAFGAAHDLGGGVLF-------GNAVLSRWPIARSQAFPLPTGETD--- 122

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  +   +      I     HL       +          +   Q   + D + ++ 
Sbjct: 123 -EKRSILLAELGSPHGAIPFFVTHLNWKFHHGA----------VREAQVAAVADIVMREA 171

Query: 200 E-SLVPFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCN 246
               +P ++ GDFN +                     F  T D       F  +      
Sbjct: 172 PMEGLPPIVVGDFNAQPEATEIRFMKGLHALNQKSVYFADTFDQTGKGPGFTFDPVRNPF 231

Query: 247 ANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           A         IDY  +   +A       S   +          G   SDH  +  +  
Sbjct: 232 AAITNEYPRRIDYVFVRGPDAQGRGKPLSSRVVFEEI----RNGVAASDHYGVLSEIS 285


>gi|32475353|ref|NP_868347.1| hypothetical protein RB8407 [Rhodopirellula baltica SH 1]
 gi|32445894|emb|CAD78625.1| probable secreted protein [Rhodopirellula baltica SH 1]
          Length = 281

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 94/320 (29%), Gaps = 69/320 (21%)

Query: 1   MIRKYVLALVFFLVPCTASV---------AQK--------VRLVSWNINTLSEQEGVSLW 43
           M+  +V  ++F  +   +           AQ+        +R++S+NI+     +G    
Sbjct: 4   MLILFVRKMLFLAIAFASFAFMLRSPLVLAQEQETNSTIRLRVLSYNIHHGRGTDG---- 59

Query: 44  KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
                    D   L    +++D D+V +QE+        +       +   T      +K
Sbjct: 60  -------KIDLDRLANVIRSVDPDLVAVQEVDQNTRRNGMVN-QVETLAVQTSLHGKFAK 111

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
           +   +      AV  K      + + L G          R      + I+  ++     H
Sbjct: 112 QIDYDGGEYGQAVLSKYPIESLEVHWLPGDPI----RERRIVGVAEILIHKTRLRFATTH 167

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
           L                  L  +QA  L   +        P +IAGDFN K         
Sbjct: 168 LHHSRAD------------LREKQATELNRLLAC---GSTPVIIAGDFNAKPAS-----L 207

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
             +T+     +           +          +DY  M       +++    +      
Sbjct: 208 AMQTLQAKWRI-----ATTESMHTFPARSPNRQLDYVAMYPANSWRIVESEVLDEPV--- 259

Query: 284 DIKSRGKRLSDHCPISIDYD 303
                    SDH P+ ++ +
Sbjct: 260 --------ASDHRPLLVEIE 271


>gi|296195555|ref|XP_002745450.1| PREDICTED: nocturnin [Callithrix jacchus]
          Length = 428

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 96/300 (32%), Gaps = 23/300 (7%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           C+++    +R++ WNI    L E ++          +      L+ +       DI+ LQ
Sbjct: 133 CSSTHP-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 191

Query: 73  EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+  Y +    +  +  +   +  +          +N     A+   +   +++  +   
Sbjct: 192 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLINSANIR 251

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189
           L A    +      A  L  + +G++  +   HLK+           +      S Q   
Sbjct: 252 LTAMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCD 300

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L++     + + +P ++ GDFN +            +++ N +      +  S      
Sbjct: 301 LLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTT 360

Query: 250 NLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 361 WKIRTSGECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 420


>gi|103486507|ref|YP_616068.1| endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis
           RB2256]
 gi|98976584|gb|ABF52735.1| Endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis
           RB2256]
          Length = 289

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 86/293 (29%), Gaps = 42/293 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A +   +++NI      +G + W +           +         D++ +QE+  +   
Sbjct: 22  ADRFSAMTYNIRLDLASDGDNAWPHRRG-------AVTNLVGYYSPDLIGMQEVLLHQKQ 74

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----S 136
           A       +                S          R +   V   ++ L    D     
Sbjct: 75  AIEADLPRYIFVGVARDDGKEQGEFSPLGFR-----RDRFTLVASGTFWLSPTPDAPSRG 129

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  A  R A    ++    ++ +L ++                      + A+ L+ WI 
Sbjct: 130 WDAALPRIASWARLKDRSSRLTLLAVNTHFDHVGKE----------ARLESARQLRRWIG 179

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKN- 250
             +      V+ GDFN  ++   ++           +    ++ R P           + 
Sbjct: 180 ANRRRGETVVLMGDFNSPVDSPPHDAITDPAPGPAALHDTLAISRTPHFGPLGTFTGFDI 239

Query: 251 -LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +  PID+  ++              + +     ++ GK  SDH P+  D 
Sbjct: 240 ERNDPSPIDHIFVNDGTA---------VLRHATLTQQTGGKLPSDHYPVLADL 283


>gi|254448412|ref|ZP_05061873.1| sphingomyelinase C [gamma proteobacterium HTCC5015]
 gi|198262025|gb|EDY86309.1| sphingomyelinase C [gamma proteobacterium HTCC5015]
          Length = 348

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/315 (12%), Positives = 94/315 (29%), Gaps = 44/315 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++++NI  L +  G       + R       +      +  D++ +QE  +  A   
Sbjct: 44  DLTVMTYNILQLPDVAGDWDDAQRLARLPDAIRNMA-----VQPDVLVIQEAMTDAARNA 98

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT----------AIAVRKKNVRVLQQSYPLLG 132
           +   +    F +    ++ S    +                + V  +     Q+ +    
Sbjct: 99  LEGLDDIYPFITPVVGLDCSGAGWDGTSGNCSNSPAVVRGGVMVLSRWPIEEQRQHIYQN 158

Query: 133 AKDSFSR-AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           ++        N+    + ++  G    V+  H++S     ++      S      Q   +
Sbjct: 159 SQMWTGDYYSNKGFAYVRIDKGGFDYHVVGTHMQSDAGDFAV------SQQTRMAQLDEM 212

Query: 192 KDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE---------K 241
           + WI  +   +  P ++ GDFN + +   +  D  +  +   S                 
Sbjct: 213 RQWIDNRAISAADPVILTGDFNVEHSRNDHLADMLQRSNSQISFPDPSIGSYSALDNLMT 272

Query: 242 DSRCNANKN-LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------- 291
            +     +        +DY V   +    ++      I    DD                
Sbjct: 273 QANAYYYEYSQSYNDTLDYVVTRTDYLLPIVSADMQVIRLKADDSWYWDYMENINSTGMH 332

Query: 292 --LSDHCPISIDYDF 304
             LSDH P+   + +
Sbjct: 333 SELSDHYPVVATFRY 347


>gi|253700139|ref|YP_003021328.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
 gi|251774989|gb|ACT17570.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
          Length = 246

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 88/285 (30%), Gaps = 44/285 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++   ++++N+++    +                  + +     + DIV LQE+ +    
Sbjct: 2   SRTFSVMTYNVHSCIGTDRQLSP-----------LRIAEVIDRCNPDIVALQELDAGLPR 50

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++  +              HS        +   A+  ++   L ++  +          
Sbjct: 51  TEMIDQAHLIAMTLEMSFHFHSSIHLKEGGY-GNAILSRSPVQLIKAGAVPTEP-LHPSF 108

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQK 198
             R AV   VE++G KI VL  H                       QA+ +   +W+   
Sbjct: 109 ERRGAVWAEVELHGVKIQVLATHFGLNRG-------------ERVCQARAVTSHEWL-GH 154

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            E L P ++ GDFN            ++ +  +   ++   +              + ID
Sbjct: 155 PECLPPAILCGDFNALFGSS-----VYRLLTRHLHDVQRKVKGRLPRGTWPAQLPFMRID 209

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +  N     +    + +              SDH P+ +  +
Sbjct: 210 HLFVTHNLKVRSVSVPRTPLTRV----------ASDHLPLVVTLE 244


>gi|147902412|ref|NP_001089262.1| CCR4 carbon catabolite repression 4-like [Xenopus laevis]
 gi|58399136|gb|AAH89295.1| MGC85016 protein [Xenopus laevis]
          Length = 459

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 95/300 (31%), Gaps = 22/300 (7%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            ++   +  R++ WNI    L E ++   +      +      L+ +       D++ LQ
Sbjct: 163 SSSQQPRTFRVMQWNILAQALGEGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQ 222

Query: 73  EMGSY-NAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+  Y +    +  +  +   F +           +N     A+   +   +++  S   
Sbjct: 223 EVDHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFQLVNSSKIR 282

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189
           L A+   +      A  L     G+ +     HLK+           +        Q   
Sbjct: 283 LSARTLKTN-QVAIAETLQCCETGRLLCFAVTHLKA----------RTGWERFRLAQGTD 331

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L +  +  + + VP +I GDFN +            +++ N +     ++ +S      
Sbjct: 332 LLHNLESITQGATVPLIICGDFNAEPTEEVYKRFASSSLNLNSAYKLLSEDGESEPPYTT 391

Query: 250 NL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   +   +DY    Q+A +               +        SDH  +  D+ F
Sbjct: 392 WKIRPTGESCHTLDYIWYSQHALRVNNALGLPTEEQIGPNRLPSFNYPSDHLSLVCDFSF 451


>gi|33563248|ref|NP_033964.1| nocturnin [Mus musculus]
 gi|17380366|sp|O35710|NOCT_MOUSE RecName: Full=Nocturnin; AltName: Full=CCR4 protein homolog
 gi|5924314|gb|AAD56547.1|AF183960_1 carbon catabolite repression 4 protein homolog [Mus musculus]
 gi|9885278|gb|AAG01384.1|AF199491_1 NOCTURNIN [Mus musculus]
 gi|26352748|dbj|BAC40004.1| unnamed protein product [Mus musculus]
 gi|148703247|gb|EDL35194.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform
           CRA_c [Mus musculus]
 gi|187952215|gb|AAI39370.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Mus
           musculus]
 gi|223461128|gb|AAI39371.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Mus
           musculus]
          Length = 429

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 97/300 (32%), Gaps = 23/300 (7%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           C++S +  +R++ WNI    L E ++          +      L+ +       DI+ LQ
Sbjct: 134 CSSSHS-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 192

Query: 73  EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+  Y +    +  +  +   +  +          +N     A+   +   +++  +   
Sbjct: 193 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIR 252

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189
           L A    +      A  L  + +G++  +   HLK+           +      S Q   
Sbjct: 253 LTAMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCD 301

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L++     + + +P ++ GDFN +            +++ N +      +  S      
Sbjct: 302 LLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSPDGQSEPPYTT 361

Query: 250 NLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 362 WKIRTSGECRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSF 421


>gi|74143502|dbj|BAE28819.1| unnamed protein product [Mus musculus]
          Length = 429

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 97/300 (32%), Gaps = 23/300 (7%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           C++S +  +R++ WNI    L E ++          +      L+ +       DI+ LQ
Sbjct: 134 CSSSHS-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 192

Query: 73  EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+  Y +    +  +  +   +  +          +N     A+   +   +++  +   
Sbjct: 193 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIR 252

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189
           L A    +      A  L  + +G++  +   HLK+           +      S Q   
Sbjct: 253 LTAMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCD 301

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L++     + + +P ++ GDFN +            +++ N +      +  S      
Sbjct: 302 LLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSPDGQSEPPYTT 361

Query: 250 NLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 362 WKIRTSGECRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSF 421


>gi|170650688|ref|NP_612535.1| nocturnin [Rattus norvegicus]
 gi|149064849|gb|EDM15000.1| similar to Nocturnin (CCR4 protein homolog) [Rattus norvegicus]
          Length = 428

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 96/301 (31%), Gaps = 25/301 (8%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           C++S    +R++ WNI    L E ++          +      L+ +       DI+ LQ
Sbjct: 133 CSSSHP-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 191

Query: 73  EMGSY-NAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           E+  Y +    +  +  +   +  +        + ++  D      ++ +   +   +  
Sbjct: 192 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQSRFKLINSTNIR 251

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-A 188
           L       ++     A  L  + +G++  +   HLK+           +      S Q  
Sbjct: 252 LTAMTLKTNQVA--IAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGC 299

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L++     + + +P ++ GDFN +            +++ N +      +  S     
Sbjct: 300 DLLQNLQNITEGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSPDGQSEPPYT 359

Query: 249 KNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     +  +DY    ++A                 +        SDH  +  D+ 
Sbjct: 360 TWKIRTSGECRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFS 419

Query: 304 F 304
           F
Sbjct: 420 F 420


>gi|301162733|emb|CBW22280.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis 638R]
          Length = 279

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 84/306 (27%), Gaps = 42/306 (13%)

Query: 11  FFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           FF   C      AS  + V ++S+NI   + ++ +  W+    R       +       D
Sbjct: 3   FFAASCGQVKQQASAPEPVNVMSFNIRYDNPEDSLDNWRYRKDR-------VANAIHFYD 55

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            DI+  QE+              + +              S             +     
Sbjct: 56  VDILGTQEVLHNQLEDLKLRLPEYGVVGVGREDGKEKGEYSALWYKKDRFNVLDSGYFWL 115

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              P +     +  A  R A  + +  +++GK+ + L+ HL                 SL
Sbjct: 116 SETPEVAGSKGWDGACERIASWVKLQDKVSGKEYFALNTHL-----DHVGGMARREGISL 170

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPK 239
           +  +   L D         +P ++ GDFN +               + +           
Sbjct: 171 MLDRVNELSD--------GLPVIVTGDFNSEPESDVIKHVTDFANPEHLTDARQASPIVY 222

Query: 240 EKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +    +       IDY  +               + Y           LSDH P
Sbjct: 223 GPSWSFHDFGKIPYNKRPLIDYVFVRNGL---------KVLRYGILAETENNAFLSDHTP 273

Query: 298 ISIDYD 303
           + +  +
Sbjct: 274 VLVTVE 279


>gi|291401220|ref|XP_002716984.1| PREDICTED: CCR4 carbon catabolite repression 4-like [Oryctolagus
           cuniculus]
          Length = 426

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 93/298 (31%), Gaps = 22/298 (7%)

Query: 18  ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            S    +R++ WNI    L E ++          +      L+ +       DI+ LQE+
Sbjct: 132 PSSHPPIRVMQWNILAQALGEGKDNFVQCPLEALKWEERKCLILEEILAYQPDILCLQEV 191

Query: 75  GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             Y +    +  +  +   +  +          +N     A+   +   +++  +   L 
Sbjct: 192 DHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 251

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWL 191
           A    +      A  L  + +G++  +   HLK+           +      S Q    L
Sbjct: 252 AMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLL 300

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           ++     + + +P ++ GDFN +            +++ N +      +  S        
Sbjct: 301 QNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWK 360

Query: 252 RN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 361 IRTSGECRHTLDYIWYSKHALSVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 418


>gi|260901207|ref|ZP_05909602.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ4037]
 gi|308106699|gb|EFO44239.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ4037]
          Length = 442

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 90/294 (30%), Gaps = 42/294 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78
           Q ++L+++NI  L                   Y L+  Y K    D++ LQE+ +     
Sbjct: 176 QNLKLMTYNIWALPAIASHIG---------ERYELIPDYIKGY--DVLALQEVFASGRDA 224

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + ++     +      +         +  D    I  R   V   Q  +P     D F+
Sbjct: 225 FLRELAKDYPYQTKMLDKD------GFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFA 278

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                      +   G+   V   H  SF    + E           QQ + +   +   
Sbjct: 279 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSLN-- 328

Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251
             +    V +GDFN   + + G+       +   +    +     S  +   N       
Sbjct: 329 IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEPQ--YSGYTASTFDPRINNFAGEAL 386

Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N   +DY ++          ++  ++  +  +   +   LSDH P+S   
Sbjct: 387 SGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVI 440


>gi|241662441|ref|YP_002980801.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D]
 gi|240864468|gb|ACS62129.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D]
          Length = 818

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 85/319 (26%), Gaps = 47/319 (14%)

Query: 20  VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               VR+ S+N+ N  +       + +   R              +    ++L+AD+V L
Sbjct: 454 AQADVRVASFNVLNYFNGDGKGVGFDDPANRGAKTRAEFERQEAKIVAAIRDLNADVVGL 513

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPL 130
            E+ +         +       +  R ++        + I  AI    + V       P+
Sbjct: 514 MEIENDGYGELSAIRRLTTQLGADWRYVDPGIPKLGGDAITVAIIYNGRTVE------PV 567

Query: 131 LGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS-FCFLDSLENTYSPSCS----- 182
                      NR+ +          +   V+  HLKS  C   S ++            
Sbjct: 568 GTPATLAIDDKNRQPLARSFRRIGGTQNFTVVVNHLKSKGCSGASGKDADQGDGQSCWNP 627

Query: 183 LLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
              + A  + DW+      +     ++ GD N                          K 
Sbjct: 628 TRVRAAGLIADWLAISPTGVADIGKLLIGDLNSYAKEDPV-----VLFADKGYADMVAKF 682

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------ 288
             +   +         ID+ +      + +       I  +E                  
Sbjct: 683 VGTDAYSYVYGGEAGYIDHALATSGLAERVRAVHEWHINADEPIALEYSFAHKSAEQQQT 742

Query: 289 -----GKRLSDHCPISIDY 302
                  R SDH P+ +D 
Sbjct: 743 FYAPDAYRSSDHDPVLVDL 761


>gi|254229945|ref|ZP_04923347.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25]
 gi|262394659|ref|YP_003286513.1| putative phospholipase C [Vibrio sp. Ex25]
 gi|151937514|gb|EDN56370.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25]
 gi|262338253|gb|ACY52048.1| putative phospholipase C [Vibrio sp. Ex25]
          Length = 442

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 93/294 (31%), Gaps = 42/294 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78
           Q ++L+++NI  L+                  Y L+ QY K    D++ LQE+ +     
Sbjct: 176 QNLKLMTYNIWALTAIASHIGD---------RYELIPQYVKGY--DVLALQEVFASGREA 224

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + ++  +  +      +         + +D    I  R   V   Q  +P     D F+
Sbjct: 225 FLRELAKEYPYQTKMLDKE------GVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFA 278

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                      +   G+   V   H  SF    + E           +Q + L   +   
Sbjct: 279 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FKQIRALAKSLN-- 328

Query: 199 KESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251
             S    V +GDFN     + G+       +   +    +    +S  +   N       
Sbjct: 329 IPSSETVVYSGDFNVNKRKFPGDYQQMIANLSAIEPQ--YSGYTESTFDPRINNFAGEAL 386

Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N   +DY ++          ++  ++     +   +   LSDH P+S   
Sbjct: 387 SGGENVEYLDYVMVSSEYGVKSFNDNRVDVPRTTSESLWKHYNLSDHFPVSATI 440


>gi|282859573|ref|ZP_06268677.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
 gi|282587624|gb|EFB92825.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
          Length = 296

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 70/301 (23%), Gaps = 33/301 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           AQ + + ++NI   +E +                 +L       D DI  +QE       
Sbjct: 7   AQNLFVGTYNIRYDAESDRSEGNG-----WNVRSKVLCDMMNFEDPDIFGVQEALINQVH 61

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                 N +            +   S          +  N        P       +  A
Sbjct: 62  DLKSQLNGYDYIGVGRDDGKEAGEFSAIFYKKDKLKKLANGNFWLSETPEKPGL-GWDAA 120

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R       E  G K      +L                     + A+ +   I +   
Sbjct: 121 CIRICTWGKFEEIGTKFKFYYFNLHMDHVG----------VVARREAAKLVIKRIKEIAG 170

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPID 258
              P ++ GDFN               I  +  +    +  ++               ID
Sbjct: 171 DKAPVILTGDFNVDQKDEIYKIFAESKILKDTYIAAKQRFAENGTYQGFKSDLYTESRID 230

Query: 259 YFVMDQNAYKF---LIQESFSEILYNEDDIKSRG------------KRLSDHCPISIDYD 303
           +  +          ++   +     + +  K               +  SDH P+     
Sbjct: 231 HIFVSNEFEVNHYGILTNGYWSKNASTNTTKEANAPQQISFEHYTHRLPSDHYPVLAKIH 290

Query: 304 F 304
           F
Sbjct: 291 F 291


>gi|298374105|ref|ZP_06984063.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298268473|gb|EFI10128.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 308

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 83/325 (25%), Gaps = 46/325 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K + + +F L    A  A+ + + ++N+   +  +  +            Y  + Q  
Sbjct: 5   MKKLIYSFLFVLCSVFALQAESMVVATYNLRNANAGDSTNGNG-----WGQRYPYIAQLV 59

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    DI   QE   +           +            +   S     T      K  
Sbjct: 60  QFHGFDIFGTQEGKYHQLQDLKNAMPGYDYIGVGRDDGKQAGEYSAIFYRTG-----KFE 114

Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +    + L    D     +     R                L  +L             
Sbjct: 115 VLDHGDFWLSTITDRPNKGWDAVLPRICTWGKFRDKQTGFTFLFFNLHM----------D 164

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS 233
                  ++ A+ +   + +     +P ++ GDFN   +        N    +       
Sbjct: 165 HIGVQARAESAKLILKKLKEF-PEKLPAILTGDFNVDQHNESYLLLDNSGIMRDSYQIAD 223

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----- 288
               P    +  +A  + +    ID+  + +                   D K+      
Sbjct: 224 FRYVPNGTFNAFHA--DRKTDSRIDHLFLTKEFDVKKYGVLTDTYRSEAKDAKNEQNANF 281

Query: 289 ----------GKRLSDHCPISIDYD 303
                      +  SDH P+ I  +
Sbjct: 282 PKEVSMQKHVARVPSDHFPVMIVVE 306


>gi|255008060|ref|ZP_05280186.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis 3_1_12]
 gi|313145777|ref|ZP_07807970.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134544|gb|EFR51904.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 285

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 83/314 (26%), Gaps = 39/314 (12%)

Query: 1   MIRKYVL---ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M +        +   L  C++S    VRL ++NI   +  + ++ WK    R       +
Sbjct: 1   MNKICFFIGAFITLLLAGCSSSPISHVRLATFNIRYDNPGDSLNSWKYRKDR-------V 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            ++ +    D++ +QE+  +     +     +                +           
Sbjct: 54  CEFIREKQPDVLGMQEVLHHQLEDLLAGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
             +       +P    K  +  A  R A    ++        L ++     F        
Sbjct: 114 LDSNTFWLSEHPDSVGKLGWDAACTRVATWAKLKEKSTGKEFLMVNTH---FDHVGTEAR 170

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             S  L+  + + +            P ++ GDFN    +              D+    
Sbjct: 171 RNSALLIIDKIKEIA--------GTHPSMMTGDFNVSEEWEAYKTITSNEFILKDAWKIA 222

Query: 238 PKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            K+      +             +  ID+  +                        +   
Sbjct: 223 AKQTGE---SYTFHDFGRVPVAEREKIDFIFVTPQIKVA--------DAEIISSAITDST 271

Query: 291 RLSDHCPISIDYDF 304
            LSDH     D +F
Sbjct: 272 YLSDHNAHLADLEF 285


>gi|290512900|ref|ZP_06552264.1| exodeoxyribonuclease III [Klebsiella sp. 1_1_55]
 gi|289774513|gb|EFD82517.1| exodeoxyribonuclease III [Klebsiella sp. 1_1_55]
          Length = 301

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 86/325 (26%), Gaps = 74/325 (22%)

Query: 9   LVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            +   +  +  +VA  ++ VS+NIN L                 +    L    +    D
Sbjct: 18  FLLPSLHYSPCTVAATMKFVSFNINGL----------------RARPHQLAAIVEKHQPD 61

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ LQE         +FP             + ++        H  +A+  K+  +  + 
Sbjct: 62  VIGLQE---TKVHDDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKDTPIAVRR 111

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                          RR +   +      + V++       F       +       +  
Sbjct: 112 -----GFPDDGEEAQRRIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAF 161

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY---------------------LGNNDDFWK 226
            Q L++++  +     P +I GD N                          L    ++  
Sbjct: 162 YQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMD 221

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSE 277
            +     +  + +              +           ID  +  Q   +  ++     
Sbjct: 222 RLLGWGLVDTWRQANPDNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-- 279

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
                D      ++ SDH P+   +
Sbjct: 280 -----DYEIRGMEKPSDHAPVWATF 299


>gi|225159097|ref|ZP_03725404.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2]
 gi|224802303|gb|EEG20568.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2]
          Length = 262

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 102/289 (35%), Gaps = 43/289 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +Q +R+V++NI        +  + +S ++   +   +     NL  DIV LQE+   +  
Sbjct: 2   SQPLRIVTYNIAHGRGLAPIQGF-SSKRQVRRNLLKISCLLANLKPDIVALQEIDENSRW 60

Query: 81  A---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           A              +       H++R+   +++   A+  ++  +  ++     +K   
Sbjct: 61  AGNFDHLELLRRAGRFKYAVFGVHNRREGLFNLNYGNAILSRHPILEWETTAFGSSK--- 117

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              G +  + + ++I G+++ V+++HL               S      Q   + D++  
Sbjct: 118 --VGEKGFLFVEIDIGGRRVPVVNLHLHY------------RSRRHRLDQVDKVFDYLEA 163

Query: 198 KKESL-----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           ++++      +P V+ GDFN         D     +   +    +            +  
Sbjct: 164 RQKTTGPGWAMPPVVCGDFNAA---DSPQDATASLLSQLNHFGGYALHPLDGKRTFPSPL 220

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D+ ++     +    E                  LSDH P+ ++
Sbjct: 221 PSRSLDFVLV-PEKQQVTKSEVVR-------------SYLSDHRPVMVE 255


>gi|110636350|ref|YP_676558.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1]
 gi|110287334|gb|ABG65393.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1]
          Length = 265

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 81/280 (28%), Gaps = 56/280 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++WNI+     +G             D   +    +  D D+V LQE+GS   V  
Sbjct: 20  TMRVMTWNIHGGIGPDG-----------RRDLQRVVDLVRKHDPDLVALQEVGSRRKVTD 68

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                T+ +  +       ++  +  D +   A+  +        + +     S+ +   
Sbjct: 69  AAEAFTF-LLSTLGNHATETRLITAPDGNYGHALICRWPLRSTVCHDI-----SYRKRER 122

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+E + E     + V+  HL               S      QAQ L D +       
Sbjct: 123 RAAIEAVAETPFGPLHVVAAHLGL-------------SFRERRHQAQLLADLVR---SGS 166

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+ GD N         D  W           FP     +            +D    
Sbjct: 167 APTVLMGDLN---------DWVWSGSVQTLLNRLFPGHTHFKTFPAFWPVF--ALDRIYC 215

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                    + +  SDH P+  + 
Sbjct: 216 RPGGM------------LARQWTDPQARTASDHLPVIAEL 243


>gi|326316303|ref|YP_004233975.1| exodeoxyribonuclease III [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373139|gb|ADX45408.1| exodeoxyribonuclease III [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 258

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 88/303 (29%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+LS                     +  +  +   D + LQE+       K+
Sbjct: 1   MKLATWNVNSLS----------------VRLPQVLAWLADNPVDAIGLQEL-------KL 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +       +         +  +A+  +          + G +D+ +R    
Sbjct: 38  VDE---KFPHDAFEAAGYHAVTFGQKTYNGVAILSRAPVRDVVRN-IPGHEDAQAR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++     +  ++ +  +     + +  Y             L  W+ ++  +  
Sbjct: 90  -VIAATLDTPQGPLRFINCYFVNGQAPGTEKFAYK------MLWLDALHRWVREELLAHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN       + D                 ++++        + +  D    + 
Sbjct: 143 RLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERTHFQSLLQLGLTDAY-RMFDQPEKSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++ +     +   +        D    +  + SDH P+ 
Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSEALRGQVTACTI-------DRQPRKNPQPSDHAPVV 254

Query: 300 IDY 302
              
Sbjct: 255 ATL 257


>gi|328473167|gb|EGF44015.1| putative phospholipase C [Vibrio parahaemolyticus 10329]
          Length = 442

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 91/294 (30%), Gaps = 42/294 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78
           Q ++L+++NI  L                   Y L+  Y K    D++ LQE+ +     
Sbjct: 176 QNLKLMTYNIWALPAIASHIG---------ERYELIPDYVKGY--DVLALQEVFASGRDA 224

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + ++  +  +             K  +  D    I  R   V   Q  +P     D F+
Sbjct: 225 FLRELAKEYPYQTKMLD------KKGFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFA 278

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                      +   G+   V   H  SF    + E           QQ + +   +   
Sbjct: 279 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSLN-- 328

Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251
             +    V +GDFN   + + G+       +   +    +     S  +   N       
Sbjct: 329 IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEPQ--YSGYTASTFDPRINNFAGEAL 386

Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N   +DY ++          ++  ++  +  +   +   LSDH P+S   
Sbjct: 387 SGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVI 440


>gi|150376190|ref|YP_001312786.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
 gi|150030737|gb|ABR62853.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
          Length = 242

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 86/284 (30%), Gaps = 49/284 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++R +++N+++    +              D   +         D++ LQE+    A  
Sbjct: 3   QRIRFLTYNVHSCFGTDR-----------KLDPARIAAVIAECRPDVIALQEVDVGRART 51

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +      + +     H       D     AV       L ++ PL  +        
Sbjct: 52  GGIDQAHMIATHLSMDAQFHP-ALHLEDEKYGDAVLTALPMRLIRAAPLPSSG------E 104

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKK 199
            R A+ + ++  G K+ V+  HL                 +   +QA  L    W+   +
Sbjct: 105 PRGALWVEIDAAGVKLQVIVTHLGLRG-------------AERLRQATALLGPGWLGAME 151

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +     ++AGD N       +     + +     +      K      ++       ID+
Sbjct: 152 QGKTRLILAGDLNAT-GRSASYRLLARQLKD---VQLLTGNKPRPTFPSRLPLL--RIDH 205

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++       ++               +  +  SDH P+  + D
Sbjct: 206 VLIGD--CIEVVSCQVH--------SSALARSASDHLPLLTELD 239


>gi|262382995|ref|ZP_06076132.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295873|gb|EEY83804.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 305

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 86/326 (26%), Gaps = 47/326 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K + + +F L    A  A+ + + ++N+   +  +  +            Y  + Q  
Sbjct: 1   MKKLIYSFLFLLCSVFALQAESMVVATYNLRNANAGDSTNGNG-----WGQRYPYIAQLI 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    DI   QE               +            +   S          ++K  
Sbjct: 56  QFHGFDIFGTQEGKYQQLQDLKNVMPGYDYIGVGRDDGKQAGEHSAIFYR-----KEKFE 110

Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +    + L    D     +     R                L  +L             
Sbjct: 111 VLDHGDFWLSTITDRPNKGWDAVLPRICTWGKFRDKQTGFTFLFFNLHM----------D 160

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS 233
                  ++ A+ +   + +     +P ++ GDFN   +        N    +       
Sbjct: 161 HIGVQARAESAKLILKKLKEF-PEKLPAILTGDFNVDQHNESYLLLDNSGIMRDSYQIAD 219

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---LIQESFS-------------E 277
               P    +  +A  + +    ID+  + +        ++ +S+               
Sbjct: 220 FRYVPNGTFNAFHA--DRKTDSRIDHLFLTKEFDVKKYGVLTDSYRSEAKESTEKEQNAN 277

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
                   K   +  SDH P+ I  +
Sbjct: 278 FPKEVSMQKYVARTPSDHFPVMIVVE 303


>gi|146299325|ref|YP_001193916.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
           UW101]
 gi|146153743|gb|ABQ04597.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
           UW101]
          Length = 279

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 87/306 (28%), Gaps = 31/306 (10%)

Query: 2   IRKY--VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           ++K   ++ +V  L+  +    Q ++++++NI      +G + W                
Sbjct: 1   MKKINSIVFVVMLLLVSSTFYGQNLKIMTYNIRLDVASDGENAWPKRK-------DYFTS 53

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             +    DI  +QE               +  F          +  +         V   
Sbjct: 54  QIQFYSPDIFGVQEATPGQVNYIASALPNYSKFGVGREEGGLGEACTIYYKKDRFKVLDS 113

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           N   L ++  ++     +  A NR     L +    K      +L         E     
Sbjct: 114 NTFWLSETPNVVS--RGWDAACNRVCTYGLFKDLKTKKTFYVFNLHL---DHMGEVARIK 168

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              L   + + L            P  + GDFN +        +  K +D    + +   
Sbjct: 169 GVQLALSKMKELN-------TKNYPAFLMGDFNSEPETAQI-AEIKKVMDDTKDVSKEKP 220

Query: 240 EKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              S    +      +   +DY  + +N          +   +         K  SDH P
Sbjct: 221 FGPSGTFNDFKHNEPVTLLLDYIFISKN-------SGLTVQKHAVLSDSKDLKYPSDHLP 273

Query: 298 ISIDYD 303
           + I+ D
Sbjct: 274 VFIEID 279


>gi|68433741|ref|XP_700794.1| PREDICTED: nocturnin [Danio rerio]
          Length = 432

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 90/308 (29%), Gaps = 17/308 (5%)

Query: 11  FFLVPCTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           F +    +     +R++ WNI    L E ++G           +    L+ +       D
Sbjct: 120 FIMTRACSLQNSPLRIMQWNILAQALGEGKDGFVRCPMEALNWSERKYLILEEILTYRPD 179

Query: 68  IVFLQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           +V LQE+  Y +    V     +   +  +         +NN          +    +  
Sbjct: 180 VVCLQEVDHYFDTFQPVLSSLGYQSSFCPKPCSPCLDVHNNNGPDGCALFFNRRRFQMLH 239

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           +  L  +              L  ++ G+   V   HLK+    ++     S   + L Q
Sbjct: 240 TAHLRLSAMMLKTNQVAVVATLRCKLTGRVFCVAVTHLKARSGWEA---FRSAQGANLLQ 296

Query: 187 QAQWLK-----DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           Q   +      +     +   +P ++ GDFN + N          ++  +        ++
Sbjct: 297 QLHEITSQSNPEMHQDDQTEGIPLIVCGDFNAEPNEEVYRHFRSSSLGLDSVYKCLSDDR 356

Query: 242 DSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            +                  +DY    + A++               D        SDH 
Sbjct: 357 TTEPPYTSWKIRPSGECCSTLDYIWYSEKAFEVDAVLRIPSEEQIGPDRLPSFHYPSDHL 416

Query: 297 PISIDYDF 304
            +  D  F
Sbjct: 417 SLVCDLSF 424


>gi|39422|emb|CAA45501.1| hybrid cereolysin AB [Bacillus cereus]
          Length = 592

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 100/313 (31%), Gaps = 37/313 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
                  +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+  
Sbjct: 289 PTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVFD 342

Query: 77  YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            +A  ++           T         E         S+      +A+  K   V +  
Sbjct: 343 NSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKIQ 402

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + Q
Sbjct: 403 Y-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQ 457

Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            + ++D+I  +   +    +  GD N        N        +KT+  +          
Sbjct: 458 LKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTAT 517

Query: 242 DSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR----- 291
                      N        +DY +  ++       E+      +     +   +     
Sbjct: 518 WDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTYD 577

Query: 292 -LSDHCPISIDYD 303
             SDH P++    
Sbjct: 578 DYSDHYPVAATIS 590


>gi|218961593|ref|YP_001741368.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730250|emb|CAO81162.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 302

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 92/289 (31%), Gaps = 34/289 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + +++WN+    E                D T L++    L+A+++  QE+  YNA 
Sbjct: 41  SNTLDVITWNLRNFPEGT--------------DLTTLKEMISALNAEVIAFQEIMDYNAF 86

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +     +           +           A     ++V +  Q        ++ S  
Sbjct: 87  MDLAEDIPYYAACVYSATDTY---------RLAYLYDTRSVTLNNQYTIF----ENDSNP 133

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R    L +  N    ++++ H K++      E+             Q L ++I+    
Sbjct: 134 FPRPPYILDITWNNSNYFIINNHFKAYGDNYIDESDSWDEEMRRRLACQKLDNYISTSLS 193

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP-KEKDSRCNAN-KNLRNKIPID 258
                ++ GD N +I    + + F   ++  +           S   +N     +   ID
Sbjct: 194 DKK-VIVLGDLNDQIAEPEDYNVFLSFLNKPEEYYFADMPIALSPTYSNVSYPSSLSHID 252

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIK----SRGKRLSDHCPISIDYD 303
           + ++    ++              ++      +    +SDH P+ I   
Sbjct: 253 HILITNELFEDFENAGSYCRTILAENWMLSWNTYSSTISDHRPVGIRIS 301


>gi|307130940|ref|YP_003882956.1| exonuclease III [Dickeya dadantii 3937]
 gi|306528469|gb|ADM98399.1| exonuclease III [Dickeya dadantii 3937]
          Length = 268

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 84/311 (27%), Gaps = 73/311 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +    F        +         H  +A+  K   +  +       +D+      R
Sbjct: 42  FPLDEVKQF-------GYHVFYHGQKGHYGVALLTKAEPLAVRRGFPTDEEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       ++      ++  Q L+ ++ Q  ++  
Sbjct: 90  RIIMADLATPLGTLTVVN-----GYFPQGESRDHAVKFPAKTRFYQDLQHYLEQHHQADQ 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWMERLKNWGLVDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +                     D      ++ S
Sbjct: 205 ECQDRFSWFDYRSAGFDDNRGLRIDLIMATAPLASRCAATGI-------DYAIRGMEKPS 257

Query: 294 DHCPISIDYDF 304
           DH P+  ++ F
Sbjct: 258 DHAPVWAEFTF 268


>gi|152965406|ref|YP_001361190.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
 gi|151359923|gb|ABS02926.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
          Length = 291

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 95/318 (29%), Gaps = 55/318 (17%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +   T +    +R+++WN+                    +    +         D+V LQ
Sbjct: 1   MSTPTPAPGAPLRVMTWNLWWRFGD------------WRARREAILAVLAQERPDVVGLQ 48

Query: 73  EM---GSYNAVAKVFPKNTWCIFYSTERLINHSKR---------DSNNDIHTAIAVRKKN 120
           E+      N    +  +    + +S        +R            + +    AV  ++
Sbjct: 49  EVWADEGENLAQWLGERLGMHVAWSPSPAPQRWRRRLAWNGEDPAVVDGLQFGNAVLSRH 108

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             + Q+   L G  D       R A+++LV+   + +     HL S              
Sbjct: 109 PLLDQEVRELPGGGDED---EGRTALKVLVDAPRRPLPFTTTHLNSSP----------AE 155

Query: 181 CSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW-------KTIDPN 231
            ++  +Q + L  ++    ++    P V+ GDFN                      +   
Sbjct: 156 SAVRVEQVRALVPFVVGGHRRGEHYPPVLTGDFNAVAESDELRLAGGYLTPGPVPGVVLV 215

Query: 232 DSLIRFPKEKDSRCNANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           DS      +        +N       +    ID+ ++      F  + S  ++       
Sbjct: 216 DSWRFAAPDDPGFTWDRRNPFVARVHQPSARIDHVLV--GLPPFTGEGSVRDVRL-VATE 272

Query: 286 KSRGKRLSDHCPISIDYD 303
              G   SDH  + +D +
Sbjct: 273 PVGGVWASDHAAVVVDLE 290


>gi|192291575|ref|YP_001992180.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
 gi|192285324|gb|ACF01705.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
          Length = 263

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 93/303 (30%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  + ++   D+V LQE+     V + 
Sbjct: 1   MRIATWNVN----------------SVRQRLDHLVSWLQDCQPDVVCLQEI---KCVDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + ++           +A+  K               D  +R    
Sbjct: 42  FPRE-------PIEALGYNVVTHGQKTFNGVALLSKYPLEEANPGLAGDESDVHARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V +    + V  ++L +   + S +  Y  S          L+D+  Q+ ++  
Sbjct: 92  --LEGVVSLKHGVVRVACLYLPNGNPVGSEKYPYKLS------WMARLRDYAQQRLKTEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGDFN        ++                 ++T+             D+     
Sbjct: 144 PLILAGDFNVIPQAEDVHNPAAWTEDALFRPETRESFQTLLGLGLTDALRATTDAPGQYT 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         I ID+ ++   A   L            D      ++ SDH P+  
Sbjct: 204 FWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGI-------DSYVRNWEKPSDHVPVWA 256

Query: 301 DYD 303
           D+D
Sbjct: 257 DFD 259


>gi|254506370|ref|ZP_05118513.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16]
 gi|219550850|gb|EED27832.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16]
          Length = 442

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 94/297 (31%), Gaps = 42/297 (14%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76
           +  Q ++L+++NI  L                   Y L+  Y K    D++ LQE+ +  
Sbjct: 173 TDEQNLKLMTYNIWALPAIASHIGD---------RYELIPDYVKGY--DVLALQEVFASG 221

Query: 77  -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               + ++  +  +      +         + +D    I  R   V   Q  +P     D
Sbjct: 222 RDAFLRELAKEYPYQTKMLDKD------GFNIHDGGVVIVSRYPIVNQAQYVFPDCSGTD 275

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            F+           +   G+   V   H  SF    + E           +Q + +   +
Sbjct: 276 CFADK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FKQMRAMAKSL 327

Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251
                +    V +GDFN   + + G+       +   +   R+     S  +   N    
Sbjct: 328 N--IPNGETVVYSGDFNVNKLKFPGDYQQMIANLSAIEP--RYSGYTASTFDPRINNFAG 383

Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  N   +DY ++          ++  ++  +  +   +   LSDH P+S   
Sbjct: 384 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAESLWKHYNLSDHFPVSAVI 440


>gi|190573815|ref|YP_001971660.1| hypothetical protein Smlt1836 [Stenotrophomonas maltophilia K279a]
 gi|190011737|emb|CAQ45357.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 298

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 91/289 (31%), Gaps = 33/289 (11%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+    ++++S+N+                KR       + +   +    ++  QE+   
Sbjct: 38  AAAPAPLKVMSFNVR-------TPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQELVKE 90

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A         +  F    R              + +   +++        P +    ++
Sbjct: 91  QADYLSEHLRGYRWFGEGRR-GGSGDEHMGVFYDSKVLAIEESGNFWLSDTPDVPGSITW 149

Query: 138 SRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                R     L     +G++ + ++ HL      D  E        L+ ++ + L    
Sbjct: 150 GNLYPRMVTWALFRRLDDGRRFYFMNTHLPYR---DEDEPRRVKGAELIGKRVEAL---- 202

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                + +P V+ GDFN +         F + +    + ++ P+      +         
Sbjct: 203 ----PADLPVVLTGDFNSEPG-GDTYKAFTRLLQDTRTQVKVPQGPRLTFHDFTGKATVQ 257

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +D+ ++            F    +  DD +  G   SDH P+ ++ D+
Sbjct: 258 -LDWVLVRG----------FHARSFLTDDRRIDGVLPSDHFPLVVELDW 295


>gi|151554255|gb|AAI49516.1| CCRN4L protein [Bos taurus]
          Length = 361

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 23/306 (7%)

Query: 11  FFLVPCTASVAQK-VRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           F  +P     +   +R++ WNI    L E ++          +      L+ +       
Sbjct: 63  FVALPADGPSSHPPIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYQP 122

Query: 67  DIVFLQEMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVL 124
           DI+ LQE+  Y +    +  +  +   +  +          +N     A+   +   +++
Sbjct: 123 DILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLV 182

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             +   L A    +      A  L  + + ++  +   HLK+           +      
Sbjct: 183 NSANIRLTAMTLKTN-QVAIAQTLECKESSRQFCIAVTHLKA----------RTGWERFR 231

Query: 185 SQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           S Q   L   +    + + +P ++ GDFN +            +++ N +      +  S
Sbjct: 232 SAQGCDLLQNLQTITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQS 291

Query: 244 RCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                          +  +DY    + A                 +        SDH  +
Sbjct: 292 EPPYTTWKIRTSGECRHTLDYIWYSRQALSVRSALDLLTEEQIGPNRLPSFNYPSDHLSL 351

Query: 299 SIDYDF 304
             D+ F
Sbjct: 352 VCDFTF 357


>gi|198275762|ref|ZP_03208293.1| hypothetical protein BACPLE_01937 [Bacteroides plebeius DSM 17135]
 gi|198271391|gb|EDY95661.1| hypothetical protein BACPLE_01937 [Bacteroides plebeius DSM 17135]
          Length = 339

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 44/343 (12%), Positives = 102/343 (29%), Gaps = 50/343 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSV----------- 47
           +RK + +L++ +   +A+ AQ     R++ +N+  L +    SL +++            
Sbjct: 1   MRKLIYSLLWAVCGMSAAPAQAQHAFRVMEYNVENLFDCRHDSLKQDTEFLPGSVRNWTY 60

Query: 48  KRTTSDYTLLRQYA----KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
            R       + +      K    D+V L E+ +   +  +   +          + +   
Sbjct: 61  SRFQDKVNKIGKVILAAGKEQVPDLVGLCEVENDYCLKSLTRYSPLREVGYKYVMTSSPD 120

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDI 162
                 I  A+  +  + R+L     +    DS      R  + +   + +G  + V   
Sbjct: 121 E---RGIDVALLYQPVSFRLLASQ-KIRIPSDSLGMRPTRDVLYVSGRVVSGDTLDVFVC 176

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           HL S        + Y    +   +QA          +      +I GDFN   +     +
Sbjct: 177 HLPSRVGEAKKTDPYRLWVARRIRQAAD----SVMAERQNPRLIIMGDFNDYPDGKSLQE 232

Query: 223 DFW--KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------FLIQ 272
                      +S + +    + +    +       +D  V++    +            
Sbjct: 233 GIRVSALAGQPESRVLYNLMDNQQGGTYRYKGEWGVLDQMVVNGGLLQPDARTRTSKEKA 292

Query: 273 ESFS-------------EILYNEDDIKSRGKRLSDHCPISIDY 302
                            +  +            SDH P+ ++ 
Sbjct: 293 SILRFPFLLEEDNVYGGDTPFRTYKGMRYHGGYSDHLPVLLEL 335


>gi|149638074|ref|XP_001509853.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Ornithorhynchus anatinus]
          Length = 617

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 93/299 (31%), Gaps = 24/299 (8%)

Query: 18  ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            S  + +R++ WNI    L E ++          +      L+ +       DI+ LQE+
Sbjct: 187 TSSHRPIRVMQWNILAQALGEGKDNFVQCPAEALKWEERKCLILEEILGYQPDILCLQEV 246

Query: 75  GSY-NAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
             + +    +  +  +   +  +        + ++  D      +R +   V   +  L+
Sbjct: 247 DHFFDTFQPLLSRLGYRGTFFPKPWSPCLDVEHNNGPDGCALFFLRDRFELVESTNIRLM 306

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                 ++     A  L  +  G+   V   HLK+    + L +               L
Sbjct: 307 ALTLKTNQVA--IAQTLRCQETGRLFCVAVTHLKARTGWERLRSAQGSDL---------L 355

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           ++     + + +P ++ GDFN +            +++ N +      +           
Sbjct: 356 RNLCAITRGAEIPLIVCGDFNAEPTEEVYRHFATSSLNLNSAYKLLSSD-GQTEPPYTTW 414

Query: 252 R------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +       +  +DY    Q A +               +        SDH  +  D+ F
Sbjct: 415 KVRASGEARHTLDYIWYSQRALRVESALGLLTEEQIGPNRLPSLHYPSDHLSLVCDFGF 473


>gi|257056393|ref|YP_003134225.1| metal-dependent hydrolase [Saccharomonospora viridis DSM 43017]
 gi|256586265|gb|ACU97398.1| metal-dependent hydrolase [Saccharomonospora viridis DSM 43017]
          Length = 286

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 96/314 (30%), Gaps = 64/314 (20%)

Query: 7   LALVFFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           L L+  ++    + + +       +R++S+NI+T    +GV           SD   +  
Sbjct: 16  LTLLTAMLTVPGTASAEPRHGPRVLRVMSYNIHTGIGTDGV-----------SDLGRIAS 64

Query: 60  YAKNLDADIVFLQEMGSYNA--------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             ++ D D+V LQE+  + A          ++       ++++    ++  +        
Sbjct: 65  VIRDADVDVVALQEVDVHWADRSDYVDQATELARLTDMSVYFAPIYDLDP-EPGREERRR 123

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR---RAVELLVEINGKKIWVLDIHLKSFC 168
             +AV  ++  +   ++ +         A         E++V + G  + V + HL    
Sbjct: 124 YGVAVLSRHPVLSATNHEISRLSTVEPGAEPEPMPGFAEVVVSVRGLPVHVYNTHL---- 179

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                   Y P  ++ S+Q   + D + Q        ++ GDFN +          ++ +
Sbjct: 180 -------DYRPDPTVRSRQVTEMLDILRQD-PPRAHQLLLGDFNAEPA-APELAPLFERL 230

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                                       IDY                 E           
Sbjct: 231 RDAW-------GTRGGGLTYPAEDPVKRIDYITAGGGVRVLNASVPAVE----------- 272

Query: 289 GKRLSDHCPISIDY 302
               SDH P+    
Sbjct: 273 ---ASDHRPVVATL 283


>gi|262371629|ref|ZP_06064908.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262311654|gb|EEY92739.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 446

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 96/300 (32%), Gaps = 38/300 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEM 74
             ++ A +++++S+NI  L                      L +   +L+  D++ LQE 
Sbjct: 172 PVSNSADELKVLSYNIYALPMVASKIS------------ERLAELPNHLNGYDVILLQEA 219

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S +  + +        + +   + +       N   + + V  +   V           
Sbjct: 220 FSSSRTSMLNQLAQQYPYQTHVPVGS-----GYNLYDSGVLVLSRYPIVKTAEMIYPDCT 274

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            +   A  +  +   +  NGK   V   H  SF            + +L   Q + ++  
Sbjct: 275 GTDCFAD-KGVIYAEIIKNGKAYHVTSTHTASFDTD--------EARALRQVQFKQIRQL 325

Query: 195 ITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-- 251
           I Q+   S    ++ GDFN    +L   D      + N +         S  +   N   
Sbjct: 326 INQQNIPSFDAVLMGGDFNVN-KFLWPQDYQDMLTNLNATAPISTGYTASTFDPRVNKLA 384

Query: 252 -------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       +DY V      + +   +   IL +  D       LSDH P+   +++
Sbjct: 385 GAAGSGGTTVEYLDYVVSSNTHRQPIQSRNDVRILRSTADPLYMTWDLSDHFPVMGHFNY 444


>gi|126723004|ref|NP_001075923.1| nocturnin [Bos taurus]
 gi|126010657|gb|AAI33609.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Bos
           taurus]
 gi|296478738|gb|DAA20853.1| CCR4 carbon catabolite repression 4-like [Bos taurus]
          Length = 427

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 23/306 (7%)

Query: 11  FFLVPCTASVAQK-VRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           F  +P     +   +R++ WNI    L E ++          +      L+ +       
Sbjct: 129 FVALPADGPSSHPPIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYQP 188

Query: 67  DIVFLQEMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVL 124
           DI+ LQE+  Y +    +  +  +   +  +          +N     A+   +   +++
Sbjct: 189 DILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLV 248

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             +   L A    +      A  L  + + ++  +   HLK+           +      
Sbjct: 249 NSANIRLTAMTLKTN-QVAIAQTLECKESSRQFCIAVTHLKA----------RTGWERFR 297

Query: 185 SQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           S Q   L   +    + + +P ++ GDFN +            +++ N +      +  S
Sbjct: 298 SAQGCDLLQNLQTITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQS 357

Query: 244 RCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                          +  +DY    + A                 +        SDH  +
Sbjct: 358 EPPYTTWKIRTSGECRHTLDYIWYSRQALSVRSALDLLTEEQIGPNRLPSFNYPSDHLSL 417

Query: 299 SIDYDF 304
             D+ F
Sbjct: 418 VCDFTF 423


>gi|256838623|ref|ZP_05544133.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739542|gb|EEU52866.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 304

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 83/325 (25%), Gaps = 46/325 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K + + +F L    A  A+ + + ++N+   +  +  +            Y  + Q  
Sbjct: 1   MKKLIYSFLFLLCSVFALQAESMVVATYNLRNANAGDSTNGNG-----WGQRYPYIAQLI 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    DI   QE               +            +   S          ++K  
Sbjct: 56  QFHGFDIFGTQEGKYQQLQDLKNAMPGYDYIGVGRDDGKQAGEHSAIFYR-----KEKFE 110

Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +    + L    D     +     R                L  +L             
Sbjct: 111 VLDHGDFWLSTITDRPNKGWDAVLPRICTWGKFRDKQTGFTFLFFNLHM----------D 160

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS 233
                  ++ A+ +   + +     +P ++ GDFN   +        N    +       
Sbjct: 161 HIGVQARAESAKLILKKLKEF-PEKLPAILTGDFNVDQHNESYLLLDNSGIMRDSYQIAD 219

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----- 288
               P    +  +A  + +    ID+  + +                   D K+      
Sbjct: 220 FRYVPNGTFNAFHA--DRKTDSRIDHLFLTKEFDVKKYGVLTDTYRSEAKDAKNEQNANF 277

Query: 289 ----------GKRLSDHCPISIDYD 303
                      +  SDH P+ I  +
Sbjct: 278 PKEVSMQKHVARVPSDHFPVMIVVE 302


>gi|153872789|ref|ZP_02001579.1| Endonuclease/Exonuclease/phosphatase [Beggiatoa sp. PS]
 gi|152070745|gb|EDN68421.1| Endonuclease/Exonuclease/phosphatase [Beggiatoa sp. PS]
          Length = 733

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 45/331 (13%), Positives = 96/331 (29%), Gaps = 51/331 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVF 70
               +V   +++ S+N+                  + +++      L      +DADI  
Sbjct: 26  STPPTVDGTLKIASFNVLNYFNTIDNGSNDARGADSETEFTRQTEKLMATLSAIDADIFG 85

Query: 71  LQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVL 124
           L E+ +      +A+ ++       +   T   +N       ++ I  A+  +   V ++
Sbjct: 86  LVEVENNGYGTGSAIEQLVNALNAKVGTDTYDFVNPGLSTLGSDKIAVALLYKPATVTLV 145

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCF------LDSLENT 176
             +        +      R  +    E    G+K  +   H KS          +   + 
Sbjct: 146 GNAVTKTDGAFANYN---RPPLVQTFEEQATGEKFTIAINHFKSKGSLTGLSQDNDQNDG 202

Query: 177 YSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
              +    +Q AQ L  W+     +     F+I GD N              TI      
Sbjct: 203 QGNNNYTRTQAAQELTTWLATDPTNSGDPDFLIIGDLNAYAQEAPI-----VTIQNAGYT 257

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----- 289
                 + ++  +      +  +D+ + + +    +   S   I  +E  +         
Sbjct: 258 NLLDTYQGTKAYSYIFDGQRGYLDHALANNSLTAQVTGVSEWPINADEPSVFDYNDGVTD 317

Query: 290 ------------------KRLSDHCPISIDY 302
                              R SDH P+ I  
Sbjct: 318 TSSSTDIVNPAGLYSISPFRSSDHDPVLIGL 348


>gi|150396373|ref|YP_001326840.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419]
 gi|150027888|gb|ABR60005.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419]
          Length = 263

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 92/305 (30%), Gaps = 69/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L  + K  + DI  LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARLDGLVGWLKESNPDIACLQEIKSIDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K             A D  SR    
Sbjct: 42  -------FPRGEIESLGYHVETHGQKGFNGVALLSKLRPDEVNRGLPGDASDEQSRF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +  +NG  + V  ++L +   +++ +  Y  +        + L  +  Q+     
Sbjct: 92  --IEGVFSVNGGALRVCCLYLPNGNPVETEKYPYKLA------WMRRLAAFAEQRLMLEE 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N                   YL      ++ +  N       +         
Sbjct: 144 PLILAGDYNVIPEPHDCWDVKVWRNDALYLPETRAAFRRL-RNLGFTDAVRATSDEAPLY 202

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L+  S  + +          ++ SDH P++
Sbjct: 203 SFWDYQAGCWPKNLGIRIDHLMLSPEAADKLVSTSIEKHV-------RSWEKPSDHVPVT 255

Query: 300 IDYDF 304
            ++ F
Sbjct: 256 AEFAF 260


>gi|253682566|ref|ZP_04863363.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum D str. 1873]
 gi|253562278|gb|EES91730.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum D str. 1873]
          Length = 631

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 89/333 (26%), Gaps = 65/333 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
               K+ + S+N+   S             R       + +  K+   DIV L E+   +
Sbjct: 315 PDKDKLSIASYNVENFSAVTD-------KTRIDKVAKSIVENLKS--PDIVGLIEIQDND 365

Query: 79  AVAKVFPKN------------------------TWCIFYSTERLINHSKRDSNNDIHTAI 114
                  K                             F + + +          +I    
Sbjct: 366 GADSKNKKEAKSTEVKADKTYKALIDAINNNKGPQYDFVNIDPINRQDGGIPGGNIRVGY 425

Query: 115 AVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             RK  V ++ +                   P     D     G R+++    E  G+K+
Sbjct: 426 IYRKDRVNLVSKPKGDAKTEVHMDGKDLAINPGRIGVDKEEFKGTRKSLAAEFEFKGEKV 485

Query: 158 WVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDF 211
           +V+  H  S     SL     P    S  L  +QA  +  +  +          V+ GD 
Sbjct: 486 FVIANHFSSKRGDQSLFGAKQPPVAGSERLRMKQASIVNKFAEEILKANPNGNVVLLGDM 545

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N               +          K          +  N   +D  ++++N      
Sbjct: 546 NDFNFSNTV-----TALKGKSFENMVDKLPAEERFTYIHQGNSQVLDNILVNKNIVLKTK 600

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            ++ +      D         SDH P+ I  DF
Sbjct: 601 VDAVNINSAFTDAQGRC----SDHDPVLIQIDF 629


>gi|237800675|ref|ZP_04589136.1| exonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023534|gb|EGI03591.1| exonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 270

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 82/312 (26%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++    + +         H  +A+  +N  +        G +     +  R
Sbjct: 41  ------QFPHADIEALGYHVHFHGQKGHYGVALLSRNPPLDLHK----GFEGDDEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + NG+ + +++       F       +        +  + L+  +     +  
Sbjct: 91  FIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQSLLESHFSNEQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++ + +     +  F     
Sbjct: 146 PLIVMGDVNISPEDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLNP 205

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +        +            D      ++
Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++  
Sbjct: 259 PSDHAPIWLELS 270


>gi|265762754|ref|ZP_06091322.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255362|gb|EEZ26708.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 285

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 83/316 (26%), Gaps = 43/316 (13%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M +      VF  +      +  +   R+ ++NI   +  + ++ WK            +
Sbjct: 1   MNKICFFIGVFITLLLAGCSSNPITHVRVATFNIRYDNPGDSLNSWKYRK-------EKV 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            ++ +    D++ +QE+ ++     +     +                +           
Sbjct: 54  CEFIREKHPDVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGEYAPVFYRKDKYDL 113

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLEN 175
             +       +P    K  +  A  R A    ++    GK+  +L+ H     F      
Sbjct: 114 LDSNTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTE 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               S  L+  + + +              ++ GDFN    +              D+  
Sbjct: 169 ARRNSALLIIDKIKEIA--------GTHSAMMTGDFNVSEEWEAYKTITSNEFVLKDAWK 220

Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
              K+                    +  ID+  +                        + 
Sbjct: 221 IAGKQSGEN---YTFHDFGRVPVAEREKIDFIFVTPQIKVA--------DAEIISSAITD 269

Query: 289 GKRLSDHCPISIDYDF 304
              LSDH     D +F
Sbjct: 270 STYLSDHNAHLADLEF 285


>gi|296129478|ref|YP_003636728.1| 5'-Nucleotidase domain protein [Cellulomonas flavigena DSM 20109]
 gi|296021293|gb|ADG74529.1| 5'-Nucleotidase domain protein [Cellulomonas flavigena DSM 20109]
          Length = 1652

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 102/348 (29%), Gaps = 64/348 (18%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQ----------------EGVSLWKNSVKRTTSDYT-- 55
            P  A+V   V + S+N+                      + V++     +R   D    
Sbjct: 474 TPTPAAVGGDVTVASFNVLNYFTTLGADTAACEAYRDRAGDPVTVSTGCAQRGAWDPDDL 533

Query: 56  -----LLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHS 102
                 +      LDAD+V L E+ +          A+  +           T   +  S
Sbjct: 534 QRQQDKIVAAIDALDADVVGLLEIENSAVVDGVADEALGTLVDALNAAAGAGTWAFVPSS 593

Query: 103 KRDSN----NDIHTAIAVRKKNVRVLQQSYPLLG---AKDSFSRAGNRRAVELLVEINGK 155
               +    + I  A+  R  +V    +S  L     +  +F+ A    A        G+
Sbjct: 594 DELPDVALQDTITNALIYRTASVERTGESRALGTASASGQAFANAREPIAQAFTPVGGGE 653

Query: 156 KIWVLDIHLKS-----FCFLDSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVIAG 209
            + V+  HLKS         D+       + +    +QA  L+DW+   +  +    + G
Sbjct: 654 PVLVVVNHLKSKGSAGPWTGDADTGDGQGASNESRVRQATALRDWVPTVQGDVEAVALVG 713

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           DFN             + +     +         +  +         +D+ ++++ A   
Sbjct: 714 DFNAYTREDP-----LQVLYDAGYVDAVETLAPGQ-WSYSFSGLSGSLDHVLLNEAARAR 767

Query: 270 LIQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303
                  EI   E                      R SDH P+ +   
Sbjct: 768 ATGADVWEINAEESVALEYSRYNYHGSLFHADDPYRSSDHDPVLVGLS 815


>gi|150009698|ref|YP_001304441.1| hypothetical protein BDI_3113 [Parabacteroides distasonis ATCC
           8503]
 gi|255013007|ref|ZP_05285133.1| hypothetical protein B2_03823 [Bacteroides sp. 2_1_7]
 gi|149938122|gb|ABR44819.1| conserved hypothetical protein with
           endonuclease/exonuclease/phosphatase family domain
           [Parabacteroides distasonis ATCC 8503]
          Length = 304

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 83/325 (25%), Gaps = 46/325 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K + + +F L    A  A+ + + ++N+   +  +  +            Y  + Q  
Sbjct: 1   MKKLIYSFLFVLCSVFALQAESMVVATYNLRNANAGDSTNGNG-----WGQRYPYIAQLV 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +    DI   QE   +           +            +   S     T      K  
Sbjct: 56  QFHGFDIFGTQEGKYHQLQDLKNAMPGYDYIGVGRDDGKQAGEYSAIFYRTG-----KFE 110

Query: 122 RVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +    + L    D     +     R                L  +L             
Sbjct: 111 VLDHGDFWLSTITDRPNKGWDAVLPRICTWGKFRDKQTGFTFLFFNLHM----------D 160

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS 233
                  ++ A+ +   + +     +P ++ GDFN   +        N    +       
Sbjct: 161 HIGVQARAESAKLILKKLKEF-PEKLPAILTGDFNVDQHNESYLLLDNSGIMRDSYQIAD 219

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----- 288
               P    +  +A  + +    ID+  + +                   D K+      
Sbjct: 220 FRYVPNGTFNAFHA--DRKTDSRIDHLFLTKEFDVKKYGVLTDTYRSEAKDAKNEQNANF 277

Query: 289 ----------GKRLSDHCPISIDYD 303
                      +  SDH P+ I  +
Sbjct: 278 PKEVSMQKHVARVPSDHFPVMIVVE 302


>gi|32381240|gb|AAP80580.1| DNA nuclease [Streptococcus suis]
          Length = 1041

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/328 (12%), Positives = 83/328 (25%), Gaps = 61/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76
               K+ + S+NI   S          S   + +    + +   +     D++ L E+  
Sbjct: 626 PNDDKLTIASYNIENFSAN--------SKSTSDAKVQRIAKSFVSDLHSPDVIGLIEVQD 677

Query: 77  YNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N                     +     T+  +       N        +I        
Sbjct: 678 NNGATNDGTTDASKSAERLIAAIQAAGGPTY-TYVDIAPENNKDGGQEGGNIRVGFLYNS 736

Query: 119 KNVRVLQQSY-----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           K V +  +                          + + A  R+ +       G+K+ VL 
Sbjct: 737 KRVSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLA 796

Query: 162 IHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
            HL S    + L          S       AQ + D+      +      V+ GDFN   
Sbjct: 797 NHLNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYE 856

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                       ++         +   S   +     N   +D  ++  N  +    +  
Sbjct: 857 FTKTIE-----ILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMV 911

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  ++         DH P+ +  D
Sbjct: 912 HVNSAFMEEHGRAF----DHDPLLVQLD 935


>gi|194291703|ref|YP_002007610.1| endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG
           19424]
 gi|193225607|emb|CAQ71553.1| putative Endonuclease/exonuclease/phosphatase [Cupriavidus
           taiwanensis LMG 19424]
          Length = 614

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 88/316 (27%), Gaps = 44/316 (13%)

Query: 21  AQKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQ-------YAKNLDADIVFLQ 72
           A  +R+ ++N+    +             R   D   L +         + LDAD++ L 
Sbjct: 302 ATALRVAAFNLQNYFNGDGQGGGLDAPGNRGAQDAAALARQQAKLVAALRGLDADVIGLM 361

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ +         +    +     R+ +        D     A+    +   + + P   
Sbjct: 362 EVQNNGYGPTGAIRQLAAMLGPDWRVADPGSAALGTD-----AIAVGLLFNARTALPAGR 416

Query: 133 AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDS-LENTYSPSCS-----LL 184
              ++    +R+ +         G  + V+  H KS   +++                  
Sbjct: 417 VATTWVGERSRQPLAATFRAATGGAPVTVVVNHFKSKNCVEAAGAQADQRDGQGCWNPAR 476

Query: 185 SQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
            Q A  L  W+       +    ++ GD N             + +          +   
Sbjct: 477 VQAADNLARWLATAPTGVADAGVLVIGDLNSYAMEDPI-----RLLARRGYADLVARFAG 531

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------- 289
               +         +D+ + D  A   ++      I  +E    S               
Sbjct: 532 PHAYSYVYAAQAGYLDHVLGDATAAAHVVAVQAWHINADEPAALSYAPAPGSRAAPAFYA 591

Query: 290 ---KRLSDHCPISIDY 302
               R SDH P+ +D+
Sbjct: 592 PDPYRSSDHDPLVVDF 607


>gi|291303281|ref|YP_003514559.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572501|gb|ADD45466.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 592

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 94/329 (28%), Gaps = 62/329 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            T +   K+ + ++N+  L  ++  + +    +    +             DI+ ++E+ 
Sbjct: 284 TTEAQGDKLAMATYNVENLDPKDDQAAFDRHGEYIAKNLA---------SPDILGIEEIQ 334

Query: 76  SYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             N                     K     ++  + S +   N    +   +I T     
Sbjct: 335 DNNGADDDGTVAADETWKKLIEAIKAAGGPSYE-YQSIDPENNADGGEPGGNIRTGFLYN 393

Query: 118 KKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
            + V+   +                   P   A    +   +R+ V    E NGKK++ +
Sbjct: 394 PERVKPSGKDAGDATTPVEVSAEGLSVSPGRVAPADDAWKDSRKPVAAEFEFNGKKVFAV 453

Query: 161 DIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRK 214
             H  S    D L   + P    S      QA+ +  ++ + +        V+ GD N  
Sbjct: 454 VNHFASKGGDDPLMGRFQPPARSSEEQRHPQAELVNKFVKELQGAVPDANVVVLGDINDF 513

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                  +   K    +     +    +    +     N   +D  ++     +    + 
Sbjct: 514 EFS----ETVAKLTAGDALKGAYDLLDEKERYSYVFDGNSQVLDQILVSPKLAEAAELDV 569

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   D       + SDH P  +   
Sbjct: 570 VHVNSEFTD-------QASDHDPSVVKLT 591


>gi|329963050|ref|ZP_08300830.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328529091|gb|EGF56021.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 287

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 78/293 (26%), Gaps = 37/293 (12%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  + V ++S+NI   + ++ +  WK    R            +  D DI+  QE+    
Sbjct: 24  SAPEPVNVMSFNIRYDNPEDSLDNWKYRKDRA-------ANAIRFYDVDILGTQEVLHNQ 76

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                     + +              S             +        P +     + 
Sbjct: 77  LEDLKQRLPEYGVIGVGREDGKEKGEYSALWYKKERFNLLDSGYFWLSETPEVAGSKGWD 136

Query: 139 RAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            A  R A    +  + +GK+ + L+ HL                 SL+  +   L D   
Sbjct: 137 GACERIASWAKLQDKASGKEFFALNTHL-----DHVGVVARREGISLILDRINALSD--- 188

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNLR 252
                 +P ++ GDFN +               + +                 +    + 
Sbjct: 189 -----GLPVIVTGDFNSEPESDVIKHVTDPSNPEHLTDARQASPIVYGPAWSFHDFGKIP 243

Query: 253 NKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 IDY  +               + Y           LSDH PI +  +
Sbjct: 244 YDKRPLIDYVFVRNRL---------KVLRYGVLAETEENAFLSDHAPILVTVE 287


>gi|148703245|gb|EDL35192.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform
           CRA_a [Mus musculus]
          Length = 609

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 97/300 (32%), Gaps = 23/300 (7%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           C++S +  +R++ WNI    L E ++          +      L+ +       DI+ LQ
Sbjct: 314 CSSSHS-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 372

Query: 73  EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+  Y +    +  +  +   +  +          +N     A+   +   +++  +   
Sbjct: 373 EVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLISSTNIR 432

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQ 189
           L A    +      A  L  + +G++  +   HLK+           +      S Q   
Sbjct: 433 LTAMTLKTN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCD 481

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L++     + + +P ++ GDFN +            +++ N +      +  S      
Sbjct: 482 LLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSPDGQSEPPYTT 541

Query: 250 NLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 542 WKIRTSGECRHTLDYIWYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSF 601


>gi|86141714|ref|ZP_01060238.1| hypothetical protein MED217_01245 [Leeuwenhoekiella blandensis
           MED217]
 gi|85831277|gb|EAQ49733.1| hypothetical protein MED217_01245 [Leeuwenhoekiella blandensis
           MED217]
          Length = 279

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 92/308 (29%), Gaps = 43/308 (13%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M   +    +FF +      AQ+V L+++NI   +E +G   W       +     L   
Sbjct: 1   MKSIFAFLSLFFCLNLL--SAQEVSLMTYNIRMATESDGADAW-------SKRKEYLTSQ 51

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 D++ +QE             +      +  + +   +   N    +AI      
Sbjct: 52  VLFYAPDVMGVQEALPEQ-------MDYLGKHLTGYKHVGVGREGKNKGEFSAIFYNADR 104

Query: 121 VRVLQQSYPLLGAKDS-----FSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173
           ++VL+     L          +  A  R     L +   +G+K +V + H     F    
Sbjct: 105 LKVLEDDTFWLSETPEKISTGWDAALPRICTYALFKDKKSGEKFYVFNTH-----FDHVG 159

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 + +L+  + + L           +P  ++GD N + +         +  D  + 
Sbjct: 160 IEARKNASALILAKIKELN-------PKNLPAFVSGDLNLEPDSAPIAVLKTELDDTYEL 212

Query: 234 LIRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       N  K        IDY          +   +   + +            
Sbjct: 213 APNGAFGPKGTFNGFKFTEPVTRRIDYIF-------QVKSNTSKVLKHAILSDSKDLHYP 265

Query: 293 SDHCPISI 300
           SDH P+ +
Sbjct: 266 SDHLPVYV 273


>gi|269968311|ref|ZP_06182334.1| putative phospholipase C precursor [Vibrio alginolyticus 40B]
 gi|269827084|gb|EEZ81395.1| putative phospholipase C precursor [Vibrio alginolyticus 40B]
          Length = 442

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 92/294 (31%), Gaps = 42/294 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78
           Q ++L+++NI  L+                  Y L+ Q+ K    D++ LQE+ +     
Sbjct: 176 QNLKLMTYNIWALTAIASHIGD---------RYELIPQHVKGY--DVLALQEVFASGREA 224

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + ++  +  +      +         + +D    I  R   V   Q  +P     D F+
Sbjct: 225 FLRELAKEYPYQTKMLDKE------GVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFA 278

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                      +   G+   V   H  SF    + E           +Q + L   +   
Sbjct: 279 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FKQIRALAQSLK-- 328

Query: 199 KESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251
             S    V +GDFN     +  +       +   +    +    +S  +   N       
Sbjct: 329 IPSSETVVYSGDFNVNKRKFPSDYQQMIANLSAIEPH--YSGYTESTFDPRINNFAGEAL 386

Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N   +DY ++          ++  ++     +   +   LSDH P+S   
Sbjct: 387 SGGENVEYLDYVMVSSEYGVKSFNDNRVDVPRTTAESLWKHYNLSDHFPVSATI 440


>gi|213625354|gb|AAI70416.1| CCR4 carbon catabolite repression 4-like, nocturnin [Xenopus
           laevis]
 gi|213626931|gb|AAI70414.1| CCR4 carbon catabolite repression 4-like, nocturnin [Xenopus
           laevis]
          Length = 388

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 94/300 (31%), Gaps = 22/300 (7%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            ++   +  R++ WNI    L E ++   +      +      L+ +       D++ LQ
Sbjct: 92  SSSQQPRTFRVMQWNILAQALGEGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQ 151

Query: 73  EMGSY-NAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+  Y +    +  +  +   F +           +N     A+   +   +++  +   
Sbjct: 152 EVDHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFQLVNSAKIR 211

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L A+   +      A  L     G+++     HLK+           +        Q   
Sbjct: 212 LSARTLKTN-QVAIAETLQCCETGRQLCFAVTHLKA----------RTGWERFRLAQGSD 260

Query: 191 LKDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           L D +    +   VP +I GDFN              +++ N +     ++ DS      
Sbjct: 261 LLDNLESITQGAIVPLIICGDFNADPTEEVYKRFASSSLNLNSAYKLLSEDGDSEPPYTT 320

Query: 250 NL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   +   +DY    Q+A +               +        SDH  +  D+ F
Sbjct: 321 WKIRTTGESCHTLDYIWYSQHALRVNAALGLPTEEQIGPNRLPSFNYPSDHLSLVCDFSF 380


>gi|83311632|ref|YP_421896.1| exonuclease III [Magnetospirillum magneticum AMB-1]
 gi|82946473|dbj|BAE51337.1| Exonuclease III [Magnetospirillum magneticum AMB-1]
          Length = 440

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 80/304 (26%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +  +   D+V LQE+   +     
Sbjct: 185 LRIATWNVN----------------SVRARLGNVLDWLGSFAPDVVLLQEIKCQD----- 223

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +   +         +  +A+  ++     ++       D  +R    
Sbjct: 224 -----QDFPLLEIQAAGYHAAVHGQKSYNGVAILSRHPMSDVRTRLSGDDSDEQARY--- 275

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E       +  ++L +       +  Y  +          L+          +
Sbjct: 276 ------IEATIGGWRLASLYLPNGNPAPGDKFDYKLA------WMARLRTHAQALLAQGI 323

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PFV+ GDFN         D                 W++I        F           
Sbjct: 324 PFVLGGDFNICPTDDDVYDPPKWRDDALCRPDSRAAWRSIVNLGLTEAFRALHPGEKGRY 383

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+F++   A   L            D      ++ SDH P+ 
Sbjct: 384 SFWDYQAGAWQRDEGLRIDHFLLSPQAADCLHACEI-------DKAPRGKEKASDHTPVW 436

Query: 300 IDYD 303
           I+ +
Sbjct: 437 IELE 440


>gi|104781211|ref|YP_607709.1| exonuclease III [Pseudomonas entomophila L48]
 gi|95110198|emb|CAK14905.1| exonuclease III [Pseudomonas entomophila L48]
          Length = 270

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 81/313 (25%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  +   +          +D+      R
Sbjct: 41  ------QFPLKDVEALGYHVHYHGQKGHYGVALLSREKPLSLHKGFASDEEDA-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     + +G  + V++       F       +        +    L+  +  + ++ 
Sbjct: 90  RFIWGTFADRDGTPVTVMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLEGQFQNG 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            P ++ GD N                        ++L    ++ + +     +  F    
Sbjct: 145 QPVLVMGDMNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLN 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +  Q     L            D      +
Sbjct: 205 PEVADRFSWFDYRSRGFEDEPKRGLRIDLIMASQGLLPRLKAAGV-------DYELRGME 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI ++  
Sbjct: 258 KPSDHAPIWLELS 270


>gi|57863772|ref|NP_001009928.1| nocturnin [Gallus gallus]
 gi|33323505|gb|AAQ07476.1|AF503351_1 nocturnin [Gallus gallus]
          Length = 419

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 92/300 (30%), Gaps = 22/300 (7%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            TAS  + +R++ WNI    L E ++          +      L+ +       DI+ LQ
Sbjct: 123 NTASNHRPIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYKPDILCLQ 182

Query: 73  EMGSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+  Y +    +  +  +   +  +          +N     A+   K+   ++  +   
Sbjct: 183 EVDHYFDTFEPLLSRLGYQCTFFPKPWSPCLDVEQNNGPDGCALFFLKERFELINSANIR 242

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L A    +      A  L     G+   +   HLK+           +      S Q   
Sbjct: 243 LTAMKLKTN-QVAIAQTLKCSETGRLFCIAVTHLKA----------RTGWERFRSAQGCD 291

Query: 191 LKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           L   +    + + +P +I GDFN +       +    +++ N +      +  S      
Sbjct: 292 LLQNLKSITQGAKIPLIICGDFNAEPTEEVYREFSNSSLNLNSAYKLLSPDGQSEPPYTT 351

Query: 250 NLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       +DY    Q+A                 +        SDH  +  D+ F
Sbjct: 352 WKIRPSGECRHTLDYIWYSQHALNVNSALGLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 411


>gi|5924316|gb|AAD56548.1| carbon catabolite repression 4 protein homolog [Homo sapiens]
          Length = 431

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 91/293 (31%), Gaps = 22/293 (7%)

Query: 23  KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78
            +R++ WNI    L E ++          +      L+ +       DI+ LQE+  Y +
Sbjct: 142 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 201

Query: 79  AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +  +  +   +  +          +N     A+   +   +++  +   L A    
Sbjct: 202 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 261

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196
           +      A  L  + +G++  +   HLK+           +      S Q    L++   
Sbjct: 262 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 310

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253
             + + +P ++ GDFN +             ++ N +      +  S             
Sbjct: 311 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSNLNLNSAYKLLSADGQSEPPYTTWKIRTSG 370

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 371 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423


>gi|270003873|gb|EFA00321.1| hypothetical protein TcasGA2_TC003159 [Tribolium castaneum]
          Length = 398

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 91/298 (30%), Gaps = 24/298 (8%)

Query: 19  SVAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           S    +R+  WNI    L    +      +      S    + +       DI+ LQE+ 
Sbjct: 103 SSPYSLRVFQWNILSQALGQMNDHFVKCPDEALEWNSRKFRIIEEIVEYCPDIICLQEVD 162

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +N +  +     +   +  +          +N     AI  R     V+     +L   
Sbjct: 163 HFNFLKYILGTQGYTGVFYPKPDSPCVYISGNNGPDGCAIFYRTNKFDVINIESRILEIW 222

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              S      A  L ++  G+++ V   HLK+           +   +L ++Q + L  +
Sbjct: 223 RVQSNQVALLA-NLRIKETGQEVCVTTTHLKA--------RQGAFLSTLRNEQGKDLLQF 273

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           ++Q      P VI GDFN +          +D++                  +R      
Sbjct: 274 VSQHCGP-RPVVICGDFNAEPIEPIYSTILSDEYLNLGSAYADCDSSSANSAAREPPYTT 332

Query: 251 LRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +        IDY    +   +              +D        SDH  +  D+
Sbjct: 333 WKIRDEGEVCHTIDYIFYKKGCLEVEAVLELPTGEEIGEDRVPSFSYPSDHFSLVCDF 390


>gi|154493449|ref|ZP_02032769.1| hypothetical protein PARMER_02788 [Parabacteroides merdae ATCC
           43184]
 gi|154086659|gb|EDN85704.1| hypothetical protein PARMER_02788 [Parabacteroides merdae ATCC
           43184]
          Length = 292

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 83/287 (28%), Gaps = 34/287 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ + ++N+   +E++GV+ W N          +++   +  D DI   QE    + +  
Sbjct: 35  ELNVATFNLRMDTEKDGVNAWPNRK-------EMVKGLIRFHDFDIFGTQEGF-KHMLDG 86

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V   + +    +       +   S     T+               P +  K   +   N
Sbjct: 87  VAELDGYAYIGAGRDDGEDAGEHSAIFYKTSRFDLLDKGNFWFSETPDVPGKGWDATCCN 146

Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           R           +GK  +  + H          +     S        + L   I Q   
Sbjct: 147 RICSWGKFRDKESGKVFYFFNSHY-----DHQGKVARRESS-------KLLIARIKQIAG 194

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PI 257
           +       GDFN                 +D  D   +     +   N+ K     +  I
Sbjct: 195 TDATVFATGDFNAVPTDEPMVTLASDGLLLDSYDLSEQPRYGTEGTYNSFKTDSEMMNRI 254

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           DY  + +               Y   +    G+  SDH P+ I   F
Sbjct: 255 DYIWVTKGT---------KVKKYAVLNDMQYGRFPSDHFPVMIQVTF 292


>gi|130079|sp|P11889|PHL2_BACCE RecName: Full=Sphingomyelinase C; Short=SMase; AltName:
           Full=Cereolysin B; AltName: Full=SMPLC; AltName:
           Full=Sphingomyelin phosphodiesterase; Flags: Precursor
 gi|580758|emb|CAA31214.1| presphingomyelinase (AA -27 to 306) [Bacillus cereus]
          Length = 333

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N        N        +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHCPISIDYD 303
              SD  P+     
Sbjct: 318 NDYSDDYPVEATIS 331


>gi|313158737|gb|EFR58124.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 318

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/325 (15%), Positives = 100/325 (30%), Gaps = 50/325 (15%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK----------VRLVSWNINTLSEQEGVSLWKNSVKRT 50
           M + ++L L   L  C  +V+             R+++ N+       G+   + + +R 
Sbjct: 18  MKKSFMLCLAGCLAACVTAVSATAARPASGQPATRVMTCNVR----ITGLPEDETAGRRW 73

Query: 51  TSDYTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                   +  +    D++ +QE+   SYN   + F  +     ++   +  +++     
Sbjct: 74  EDCRDACLKAIRMYRPDVICMQEVIYDSYNYFKEKF-SDYVAYGFAGPEMDPYTEGYHFI 132

Query: 109 DIHTAIAVRKKNVRVLQ-----QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLD 161
             +     +K+   V          PL     S++    R    + +    +G +  VLD
Sbjct: 133 GKNVIFFSKKRYEFVSSGCYWLSETPLAAGSCSWNTMRARHCNWVRLRDRKSGAEFRVLD 192

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           IHL                     +Q + +     Q  +   P +I GDFN  I      
Sbjct: 193 IHLDHKSDD------------ARREQMKMIVGECAQYAD-GFPQIICGDFNSGIENAPVA 239

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSE 277
                        +  P E     +  K    +      ID+  +  N            
Sbjct: 240 CLRDAGWQEAYEAVHGPGEAGFTYHGFKGPDYRKKNARRIDFIFVRGNLQP--------- 290

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
           +       K  G   SDH  +  D+
Sbjct: 291 VAAEILRDKVDGLYPSDHYFLMSDF 315


>gi|5545327|dbj|BAA82542.1| DNase [Actinobacillus actinomycetemcomitans]
          Length = 278

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 94/320 (29%), Gaps = 73/320 (22%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++P   +  Q ++++S+NIN L                 +    L +       D++ LQ
Sbjct: 1   MLPQHKAKEQNMKIMSFNINGL----------------RARPHQLEEIINKYQPDVLGLQ 44

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+       +VFP +           + +         H  +A+  K   +  +      
Sbjct: 45  EI---KVADEVFPYDL-------VDHLGYHVNHFGQKGHYGVALLSKQAPLSVRKGFPTD 94

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            +++  R      + + +E    ++ V++       F       +        +    L+
Sbjct: 95  DEEAQKR-----IIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQ 144

Query: 193 DWITQKKESLVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPN 231
            ++ Q   +  P +I GD N                        ++L    ++++ +   
Sbjct: 145 RYLEQDHNAQNPVIIMGDMNISPSNLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAY 204

Query: 232 DSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNE 282
                F     +  +       +           ID+ + ++      +           
Sbjct: 205 GLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI------- 257

Query: 283 DDIKSRGKRLSDHCPISIDY 302
                   + SDH PI  ++
Sbjct: 258 ALDIRAMNKPSDHAPIWAEF 277


>gi|239995387|ref|ZP_04715911.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas
            macleodii ATCC 27126]
          Length = 1097

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 85/316 (26%), Gaps = 41/316 (12%)

Query: 22   QKVRLVSWNINTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFLQEMGSY-- 77
              V++ S+N+            + +                   +DAD++ L E+ +   
Sbjct: 721  GDVKVASFNVLNYFNGPNFPTSRGADSEDEFARQQAKTVAAIVAMDADVLGLVEIENDGY 780

Query: 78   ---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               +A+A +       +       +        ++I   I  +      +      + + 
Sbjct: 781  GSDSAIASLVNSVNAELGSDVYSYVALESLLGGDEIAVGIIYK---PATVTPQGAAVTSS 837

Query: 135  DSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFC------FLDSLENTYSPSCSLLSQ 186
            ++    GNR+ +     +N       +   H KS          D+         + L  
Sbjct: 838  EAPFDYGNRQPLLQTFSVNSNSEAFTLAVNHFKSKGSCGSATGNDADLGDGQGCWNELRT 897

Query: 187  QAQW-LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            QA   L   +   +      ++ GD N               ++                
Sbjct: 898  QAALGLTALVQNSEGLSDRVIVMGDLNAYAKEDPIL-----ALEDAGYSNLVNLFHGESA 952

Query: 246  NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------------- 289
             +         +D+ +      +++   +   I  +E  +                    
Sbjct: 953  YSYSFGGEIGYLDHALSSSTLTEYVADATVWHINADEPRVFDYNVEYKSETQLSSYYGAD 1012

Query: 290  -KRLSDHCPISIDYDF 304
              R SDH P+ +  DF
Sbjct: 1013 AYRSSDHDPVIVVLDF 1028


>gi|160884084|ref|ZP_02065087.1| hypothetical protein BACOVA_02060 [Bacteroides ovatus ATCC 8483]
 gi|156110426|gb|EDO12171.1| hypothetical protein BACOVA_02060 [Bacteroides ovatus ATCC 8483]
          Length = 611

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 80/304 (26%), Gaps = 63/304 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L +   L          +RL+++NI   +  + +             +  +    
Sbjct: 4   MKKIFLLIFVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52

Query: 62  KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   D+V +QE+ S    +    V  +                           I +  
Sbjct: 53  NNASPDVVAIQEVDSMTRRSGQKYVLGEIAERTQMHACFAPAIE----FEGGKYGIGLLT 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K V +  Q+ PL G      R   R  +    E           HL              
Sbjct: 109 KQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHLSLTEGD-------- 150

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                  +  + +K  I   K+   P  +AGD N +                 +    F 
Sbjct: 151 -----RMKSLEIVKSLIASYKK---PLFLAGDMNAEPESDFIK----------ELQKDFQ 192

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +   +       K  IDY  + +         S   +              SDH PI
Sbjct: 193 ILSNPEKHTYPAPDPKEAIDYIAVSKQNATGFAVISAKVVN---------ELMASDHRPI 243

Query: 299 SIDY 302
            ++ 
Sbjct: 244 LVEL 247


>gi|189235069|ref|XP_974729.2| PREDICTED: similar to nocturnin CG31299-PE [Tribolium castaneum]
          Length = 397

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 91/298 (30%), Gaps = 24/298 (8%)

Query: 19  SVAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           S    +R+  WNI    L    +      +      S    + +       DI+ LQE+ 
Sbjct: 102 SSPYSLRVFQWNILSQALGQMNDHFVKCPDEALEWNSRKFRIIEEIVEYCPDIICLQEVD 161

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +N +  +     +   +  +          +N     AI  R     V+     +L   
Sbjct: 162 HFNFLKYILGTQGYTGVFYPKPDSPCVYISGNNGPDGCAIFYRTNKFDVINIESRILEIW 221

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              S      A  L ++  G+++ V   HLK+           +   +L ++Q + L  +
Sbjct: 222 RVQSNQVALLA-NLRIKETGQEVCVTTTHLKA--------RQGAFLSTLRNEQGKDLLQF 272

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           ++Q      P VI GDFN +          +D++                  +R      
Sbjct: 273 VSQHCGP-RPVVICGDFNAEPIEPIYSTILSDEYLNLGSAYADCDSSSANSAAREPPYTT 331

Query: 251 LRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +        IDY    +   +              +D        SDH  +  D+
Sbjct: 332 WKIRDEGEVCHTIDYIFYKKGCLEVEAVLELPTGEEIGEDRVPSFSYPSDHFSLVCDF 389


>gi|332528588|ref|ZP_08404570.1| endonuclease/exonuclease/phosphatase [Hylemonella gracilis ATCC
           19624]
 gi|332041904|gb|EGI78248.1| endonuclease/exonuclease/phosphatase [Hylemonella gracilis ATCC
           19624]
          Length = 264

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 87/300 (29%), Gaps = 64/300 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P     A  +R+ ++NI+                R   +   L    + LDADIV LQE+
Sbjct: 15  PMAGHQAATLRVATYNIH--------KGVLGLGPRRRLEIHNLSLAVEQLDADIVCLQEV 66

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSY 128
              N   +    + W      + L                      A+  +   +     
Sbjct: 67  RKLN-HREAAHFSRWPELPQADYLAPEGYEAIYRTNAYTRHGEHGNAMLSRWPVLSAGH- 124

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                  S  R   R  +  +V ++G+ + VL +HL                 +   +QA
Sbjct: 125 ----EDMSDHRFEQRGLLHGVVSVHGQSVHVLVVHLGLI-------------RASRVRQA 167

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L  +I ++  +  P ++AGDFN                        F +     C   
Sbjct: 168 AQLDQYIRREIPTEAPLIVAGDFNDW---------------GERVHRHFERMGLQTCEPA 212

Query: 249 KNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +           +DY  +       ++                   R+SDH P+  ++ 
Sbjct: 213 AHPTFPARLPLVQLDYVYVRGLTPLRVVVP-----------RGRAWWRMSDHLPLIAEFT 261


>gi|332531041|ref|ZP_08406960.1| exodeoxyribonuclease III Xth [Hylemonella gracilis ATCC 19624]
 gi|332039522|gb|EGI75929.1| exodeoxyribonuclease III Xth [Hylemonella gracilis ATCC 19624]
          Length = 268

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/304 (10%), Positives = 88/304 (28%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82
           ++L +WN+N+L              R       L   A      D++ LQE+   +    
Sbjct: 1   MKLATWNVNSLG------------VRLPQVLDWLAAQAAGGAPIDVLALQELKLTDD--- 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                     ++      +         +  +A+  +      +            +A  
Sbjct: 46  -------KFPHAEFEAAGYRAEAYGQKTYNGVALISRLSLPALRDVTRNITGFEDEQAR- 97

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +   ++     + +++ +  +     S +  Y        +    L+  +  +  + 
Sbjct: 98  --VIVATLDTPQGPLRIVNGYFVNGQEPGSEKFAYK------MRWMDALRAQVQAELATH 149

Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247
              V+ GD+N   +   + D                 +K +        + +  +    +
Sbjct: 150 ARLVLLGDYNITPDDRDSYDPEGLRETIHHTTQEREQFKALLALGLHDAY-RMFEQPEKS 208

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++ +     +   +        D +  + K+ SDH P+
Sbjct: 209 YSWWDYRMLGFQKNRGLRIDHILVSEALKPAVQGCTI-------DRLPRKNKQPSDHAPV 261

Query: 299 SIDY 302
            ++ 
Sbjct: 262 LLEL 265


>gi|146282538|ref|YP_001172691.1| exonuclease III [Pseudomonas stutzeri A1501]
 gi|145570743|gb|ABP79849.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501]
          Length = 301

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 89/312 (28%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE        + 
Sbjct: 32  MKIVSFNINGL----------------RARPHQLSAIIEKHQPDVIGLQE---TKVADEQ 72

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRAGN 142
           FP+       +    + +         H  +A+  +     + + +P  G +        
Sbjct: 73  FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLEVHKGFPSDGEESQKRFIWG 125

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A     + NG+ + V++       F       +       ++    L+  + Q+    
Sbjct: 126 RFA-----DANGQPVTVMN-----GYFPQGESRAHPVKFPAKTKFYADLQALLEQRFSPD 175

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
               + GDFN                        ++L    ++ + I        F    
Sbjct: 176 ESLALMGDFNISPQDCDIGIGEVNAKRWLRTGKCSFLPEEREWLERIKGWGLQDSFRTLN 235

Query: 242 DSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             IDY +     ++ +            D      +
Sbjct: 236 PEVVDRFSWFDYRSRGFEDEPRRGLRIDYILTTHALHERVTDCGV-------DYDIRAME 288

Query: 291 RLSDHCPISIDY 302
           + SDHCP+ I+ 
Sbjct: 289 KPSDHCPVWIEL 300


>gi|323494918|ref|ZP_08100010.1| putative phospholipase C [Vibrio brasiliensis LMG 20546]
 gi|323310882|gb|EGA64054.1| putative phospholipase C [Vibrio brasiliensis LMG 20546]
          Length = 441

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 94/300 (31%), Gaps = 40/300 (13%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              S    ++++++NI  L+                  Y L+ +Y K    D++ LQE+ 
Sbjct: 170 SLESDPNTLKMMTYNIWALTA---------IASHIEDRYQLIPEYVKGY--DVLALQEVF 218

Query: 76  S---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           +    + + ++  +  +      +         + +D    I  R   V   Q  +P   
Sbjct: 219 ASGRDSFLRELAKEYPYQTKMLDKD------GFNIHDGGVMIVSRYPIVNQAQYVFPDCT 272

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D F+           +   GK   +   H  S+    + +           +Q + L 
Sbjct: 273 GTDCFADK---GVNYAEIIKGGKAYHIFATHTASYDTDTARDYRQRQ-----FKQMRQLA 324

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL- 251
             ++         V +GDFN         D      + +     +    +S  +   N  
Sbjct: 325 --LSLNISQNETVVYSGDFNVN-KRKFPGDYQQMITNLSAIEPDYSGYTESTFDPRINDF 381

Query: 252 --------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    N   +DY ++          ++  ++  +  +   +   LSDH P++   +
Sbjct: 382 AGEAMSGGENVEYLDYVMVSNEYQIKSSNDNRVDVPRSTGERLWKHYNLSDHFPVTAVIE 441


>gi|296863686|pdb|3MPR|A Chain A, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA
           Protein From Bacteroides Thetaiotaomicron, Northeast
           Struct Genomics Consortium Target Btr318a
 gi|296863687|pdb|3MPR|B Chain B, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA
           Protein From Bacteroides Thetaiotaomicron, Northeast
           Struct Genomics Consortium Target Btr318a
 gi|296863688|pdb|3MPR|C Chain C, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA
           Protein From Bacteroides Thetaiotaomicron, Northeast
           Struct Genomics Consortium Target Btr318a
 gi|296863689|pdb|3MPR|D Chain D, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA
           Protein From Bacteroides Thetaiotaomicron, Northeast
           Struct Genomics Consortium Target Btr318a
          Length = 298

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 75/302 (24%), Gaps = 32/302 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               + + S+N+   +  +               Y ++ Q  +  D DI   QE   +  
Sbjct: 3   QPTSLTVASYNLRNANGSDSARGDG-----WGQRYPVIAQXVQYHDFDIFGTQECFLHQL 57

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    +                S     T      +         P + +K  +  
Sbjct: 58  KDXKEALPGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSK-GWDA 116

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R       +        L  +L         +     S  L+ ++ + L        
Sbjct: 117 VLPRICSWGHFKCKDTGFEFLFFNLH---XDHIGKKARVESAFLVQEKXKELGR------ 167

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNK-IPI 257
              +P ++ GDFN    +   +    K  +  +     +    +   N           I
Sbjct: 168 GKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFDPNSFTESRI 227

Query: 258 DYFVMDQNAYKFL---------------IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+  +  + +                   +E   +            +  SDH P+ ++ 
Sbjct: 228 DHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVEL 287

Query: 303 DF 304
            F
Sbjct: 288 VF 289


>gi|189464427|ref|ZP_03013212.1| hypothetical protein BACINT_00769 [Bacteroides intestinalis DSM
           17393]
 gi|189438217|gb|EDV07202.1| hypothetical protein BACINT_00769 [Bacteroides intestinalis DSM
           17393]
          Length = 277

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 79/306 (25%), Gaps = 43/306 (14%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L            Q + ++++NI   +  +  + WK            + +       
Sbjct: 4   LILFGSCKDQPTQNEQPLEVMTFNIRLDAPSDSANNWKYRK-------DNVCKMIAYYQP 56

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ +QE+              +            +         T      ++      
Sbjct: 57  DLLGMQEVCHNQMEDLKLGLPQYTALGVGRDDGKEAGEYCPVFFKTDRFTLVEHGNFSLS 116

Query: 127 SYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             P       +  + NR     ++  + +GKK+   + HL      +  +        L+
Sbjct: 117 EQPETIGVRGWDASYNRITTWAILQKKSDGKKLVFFNTHL-----DNDGKTARKEGVQLI 171

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             + +             +P +I GDFN             +T++               
Sbjct: 172 LNKIKE--------TAPHMPAIITGDFNCTPGEAP-----LQTLEKGGMKNTSKVATVMY 218

Query: 245 CNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +             ++ +DY  +                 Y           LSDH P
Sbjct: 219 GPSWSFHDFGRLPMEKRVLLDYVFVTNGT---------KTDRYRVIQDTPENGFLSDHNP 269

Query: 298 ISIDYD 303
           + ++  
Sbjct: 270 VLVNIT 275


>gi|149187906|ref|ZP_01866202.1| putative phospholipase C precursor [Vibrio shilonii AK1]
 gi|148838302|gb|EDL55243.1| putative phospholipase C precursor [Vibrio shilonii AK1]
          Length = 442

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 90/291 (30%), Gaps = 36/291 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++L+++NI  L                   Y L+ +Y K    D++ LQE+ +    A
Sbjct: 176 QNLKLMTYNIWALPAIASHIGD---------RYELIPEYVKGY--DVLALQEVFASGRDA 224

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +        + +               I   I  R   V   Q  +P     D F+   
Sbjct: 225 FLRELAKEYPYQTKMLDKEGINIYDGGVI---IVSRYPIVNEAQYVFPDCSGTDCFADK- 280

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   V   G+   V   H  SF    + +           +Q + L   +     +
Sbjct: 281 --GVNYAEVIKGGQAYHVFATHTASFDTDTARDYRQRQ-----FKQIRALAQSLD--IPA 331

Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251
               + +GDFN   + +  +       ++ ++    +     S  +   N          
Sbjct: 332 NEAVIYSGDFNVNKLKFPDDYQQMMTNLNVSEPQ--YSGYTASTFDPRINDFAGGALSGG 389

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N   +DY ++          ++  ++    D+   +   LSDH P++   
Sbjct: 390 ANVEYLDYVMVSNEYGTKSYNDNRVDVPRTTDESLWKHYNLSDHFPVTAVI 440


>gi|26989609|ref|NP_745034.1| exonuclease III [Pseudomonas putida KT2440]
 gi|24984490|gb|AAN68498.1|AE016481_14 exodeoxyribonuclease III [Pseudomonas putida KT2440]
          Length = 270

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 82/313 (26%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V +NIN L                 +    L    +    D++ LQE    +     
Sbjct: 1   MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+  +   +          +D+      R
Sbjct: 41  ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQPPLSLHKGFATDEEDA-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     + NG  I +++       F       +        +    L+  +  +  + 
Sbjct: 90  RFIWGTFADANGSPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFRND 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            P ++ GD N                        ++L    ++ + +     +  F    
Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +  Q     +            D      +
Sbjct: 205 PDVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQLVPRIKAAGV-------DYELRGME 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI ++  
Sbjct: 258 KPSDHAPIWLELS 270


>gi|260220365|emb|CBA27833.1| hypothetical protein Csp_A04240 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 284

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 89/293 (30%), Gaps = 54/293 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   +  + +R+V++NI+           +        +   L    + +DAD++ LQE+
Sbjct: 30  PSGGARMKTLRVVTYNIH--------KGVQGLGPLRRLEIHNLSHAMELMDADVLCLQEV 81

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSY 128
              +   +      W      + L                      A+  K   V  Q  
Sbjct: 82  RKLHQ-REARHFPHWPQAPQADYLAPSGYEAIYRTNAITRHGEHGNALLSKWPVVQHQH- 139

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                  S  R   R  + + +++ G+ + VL +HL                     +Q 
Sbjct: 140 ----EDMSDHRLEQRGLLHVELDVAGQSLHVLVVHLGLIRAG-------------RGRQL 182

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           Q L  +I ++     P ++AGDFN             + + P        K     C   
Sbjct: 183 QQLTQFIQREIPPDAPLLVAGDFNDLPA------WVARQLAPAGLKAPVTK----PCVTF 232

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +    + +D+ +        L   S                R+SDH P+  +
Sbjct: 233 PSRLPLVQLDHVLARG-----LTPVSA------TAPRGMSWARMSDHLPLITE 274


>gi|257141810|ref|ZP_05590072.1| extracellular nuclease, putative [Burkholderia thailandensis E264]
          Length = 613

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R              +    K LDAD++ L E+ 
Sbjct: 283 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 342

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  S   +   S R   + I  A+    + V+      P+  A 
Sbjct: 343 NDGYGPLSAVRQLAAKLGDSWRVVDPGSARLGGDAIAVALIYDSRKVK------PVGNAA 396

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +    +     + + V   HLKS    ++  +            +  S+
Sbjct: 397 TLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCWNATRSR 456

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  + 
Sbjct: 457 AAAKVADWLARNPTGAHSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAP 511

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 512 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 571

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 572 DAYRSSDHDPVLIDI 586


>gi|167577079|ref|ZP_02369953.1| extracellular nuclease, putative [Burkholderia thailandensis TXDOH]
          Length = 613

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R              +    K LDAD++ L E+ 
Sbjct: 283 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 342

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  S   +   S R   + I  A+    + V+      P+  A 
Sbjct: 343 NDGYGPLSAVRQLAAKLGDSWRVVDPGSARLGGDAIAVALIYDSRKVK------PVGNAA 396

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +    +     + + V   HLKS    ++  +            +  S+
Sbjct: 397 TLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCWNATRSR 456

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  + 
Sbjct: 457 AAAKVADWLARNPTGAHSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAP 511

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 512 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 571

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 572 DAYRSSDHDPVLIDI 586


>gi|83718276|ref|YP_438732.1| extracellular nuclease [Burkholderia thailandensis E264]
 gi|83652101|gb|ABC36165.1| extracellular nuclease, putative [Burkholderia thailandensis E264]
          Length = 622

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 93/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R              +    K LDAD++ L E+ 
Sbjct: 292 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 351

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  S   +   S R   + I  A+    + V+      P+  A 
Sbjct: 352 NDGYGPLSAVRQLAAKLGDSWRVVDPGSARLGGDAIAVALIYDSRKVK------PVGNAA 405

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +    +     + + V   HLKS    ++  +            +  S+
Sbjct: 406 TLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCWNATRSR 465

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  + 
Sbjct: 466 AAAKVADWLARNPTGAHSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAP 520

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 521 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQRTYYAP 580

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 581 DAYRSSDHDPVLIDI 595


>gi|197119100|ref|YP_002139527.1| metal-dependent hydrolase [Geobacter bemidjiensis Bem]
 gi|197088460|gb|ACH39731.1| metal-dependent hydrolase [Geobacter bemidjiensis Bem]
          Length = 246

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 88/285 (30%), Gaps = 44/285 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++   ++++N+++    +                  + +     + DIV LQE+ +    
Sbjct: 2   SRTFSVMTYNVHSCIGTDRQLSP-----------LRIAEVIDRCNPDIVALQELDAGLPR 50

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++  +              HS        +   A+  ++   L ++  +          
Sbjct: 51  TEMIDQAHLIAMTLEMSFHFHSSIHLKEGGY-GNAILSRSPVQLIKAGAVPTDP-LHPSF 108

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQK 198
             R A+   VE++G KI VL  H                      +QA+ +   +W+   
Sbjct: 109 ERRGALWAEVELHGVKIQVLATHFGLNRG-------------ERVRQARAVTGPEWL-GH 154

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            E L P V+ GDFN            ++ +      ++   +              + ID
Sbjct: 155 PECLPPAVLCGDFNALFGSS-----VYRLLTRQLHDVQRKVKGRLPRGTWPAQLPFMRID 209

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +  N     +    + +              SDH P+ +  +
Sbjct: 210 HLFVTHNLKVRSVSVPRNPLTRV----------ASDHLPLVVTLE 244


>gi|255533667|ref|YP_003094039.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255346651|gb|ACU05977.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 269

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 92/316 (29%), Gaps = 64/316 (20%)

Query: 2   IRKYVLALVFFLV-------------PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48
           + +    L+   +             P   +  + +R++S+NI+  +      L      
Sbjct: 1   MNRITFFLIALFLQLNLRPEGYAQTKPADKNAGKTLRIMSYNIHHANPPSKPDL------ 54

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-N 107
               D   + +      ADIV LQE+ +   V++    N   I         H  +    
Sbjct: 55  ---IDLDAIARVITASKADIVALQEVET--GVSRSGGANEAKILAEKTGFQYHFFKAIDY 109

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
           +     IA+  +      +  PL         A  R      +++  +KI   + HL   
Sbjct: 110 DGGDYGIAILSRYPLKEIRLVPLP----QQITAEKRILGYATIKVGKQKIIFANTHL--- 162

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                       +      +   ++  + + + + +P ++ GD N        +      
Sbjct: 163 -----------DASRTDENRLVQMQSILKEFEHAALPVILCGDLNSVAGSSVIS------ 205

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
              +    R   E     +   N   +  IDY              + +      +    
Sbjct: 206 -LLDAQFKRTCTENCPPTSPQINP--RRTIDYI------------ATKNVTWPLLEYQVI 250

Query: 288 RGKRLSDHCPISIDYD 303
                SDH P+   ++
Sbjct: 251 AETYASDHRPVMAIFN 266


>gi|311696709|gb|ADP99582.1| extracellular nuclease [marine bacterium HP15]
          Length = 586

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 86/323 (26%), Gaps = 34/323 (10%)

Query: 11  FFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQ 59
           F       +         VR+++ N+      +G            +          L  
Sbjct: 265 FLATNPRETAPGPRHEASVRIMALNLGNFFNGDGRGGEFPTSRGAGTPAEFRRQQQQLVN 324

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                D DI+ L E+ +                  T R ++   +D +++I T +  R  
Sbjct: 325 TLLAPDPDILALTELENDGYGPASSIAELAEALGGTWRFVSTPGQDGDDEIRTGLLYRSD 384

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTY 177
            +  +     L         +G R  +            + V+  HLKS     +  +  
Sbjct: 385 RISAVGSPERLAKGPFE---SGGRPPLAQDFGRTDGDATVRVIVPHLKSKSCRGARGDNQ 441

Query: 178 SPS------CSLLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTID 229
             +       S  + +A+ L  W             +I GD N                 
Sbjct: 442 DQADGQGCYASRRTNEAKTLAAWSGSDTRRHYSVGTLIIGDLNSYAREHPIAVLEQAGFT 501

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                     EK       +    K  +D+ +  +     ++      +  +E  +    
Sbjct: 502 SMVHHFYPCTEKTCGHYTYRYRGQKGSLDFALASETLKPRVMGAWSWLVNADEPRVLDYR 561

Query: 290 ----------KRLSDHCPISIDY 302
                      R SDH P+ +D 
Sbjct: 562 SDHPASGRGPWRSSDHNPVIVDL 584


>gi|261821541|ref|YP_003259647.1| exonuclease III [Pectobacterium wasabiae WPP163]
 gi|261605554|gb|ACX88040.1| exodeoxyribonuclease III [Pectobacterium wasabiae WPP163]
          Length = 272

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 83/313 (26%), Gaps = 73/313 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++VS+NIN L                 +    L    +    D++ LQE   ++ +
Sbjct: 2   AANMKVVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDDM 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +   + +           +         H  +A+  K   +  +        D+    
Sbjct: 46  FPLEDVSQY----------GYHVYYHGQKGHYGVALLCKEQPIAVRRGFPTDEDDA---- 91

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +          + V++       F       +       ++  Q L+ ++ Q   
Sbjct: 92  -QRRIIMADFATEHGTLTVVN-----GYFPQGESRDHPVKFPAKTRFYQDLQTYLEQHHS 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
           +  P ++ GD N                          L    ++   +     +  F  
Sbjct: 146 ATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMARLQGWGLIDTFRA 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +      +  +           D      +
Sbjct: 206 ANPESNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAERCVATGI-------DYDIRGME 258

Query: 291 RLSDHCPISIDYD 303
           + SDH PI  ++ 
Sbjct: 259 KPSDHAPIWAEFT 271


>gi|162448958|ref|YP_001611325.1| endonuclease/exonuclease/phosphatase family protein [Sorangium
           cellulosum 'So ce 56']
 gi|161159540|emb|CAN90845.1| endonuclease/exonuclease/phosphatase family [Sorangium cellulosum
           'So ce 56']
          Length = 1174

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 84/334 (25%), Gaps = 70/334 (20%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVF 70
           +       A  + + ++N+  L   +               +  L +         D+V 
Sbjct: 643 VTSLGPRTADDLDVAAFNVENLDPGDP-----------QEKFDRLARILVENLGSPDLVA 691

Query: 71  LQEMGSYN-------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
           L+E+   +                   A+A V    +   F S +        +   +I 
Sbjct: 692 LEEVQDNSGPTNNGVVDASTTFARLIAAIAAVPGGPSTYQFRSIDPTDGTDGGEPGGNIR 751

Query: 112 TAIAVRKKNVR----------------------VLQQSYPLLGAKDSFSRAGNRRAVELL 149
                R                           V  +  P      + + A +R+ +   
Sbjct: 752 VGFLFRTDRGLEFVDRPGAGALTPNEVLGGAGGVSLRYSPGRIDPGNPAFASSRKPLAGE 811

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVP- 204
              NG+ ++V+  H  S    + L   + P    S     QQA  +  ++ Q  +S    
Sbjct: 812 FRWNGQPLFVVANHWNSKGGDEPLYGRFQPPTLSSEVQRRQQATVVAGFVRQILDSDPAA 871

Query: 205 -FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V+ GD N               +                        N   +D+ ++ 
Sbjct: 872 NVVVLGDLNDFQFSAP-----LGILKDAGLTTLIETLPPEERYTYVFDGNGQSLDHVLVS 926

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            N                         + SDH P
Sbjct: 927 ANL-----AGPKLVGFDVVHVNAEFADQASDHDP 955


>gi|228937917|ref|ZP_04100544.1| Sphingomyelinase C [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228962244|ref|ZP_04123677.1| Sphingomyelinase C [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228970798|ref|ZP_04131438.1| Sphingomyelinase C [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228977373|ref|ZP_04137768.1| Sphingomyelinase C [Bacillus thuringiensis Bt407]
 gi|228782350|gb|EEM30533.1| Sphingomyelinase C [Bacillus thuringiensis Bt407]
 gi|228788923|gb|EEM36862.1| Sphingomyelinase C [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228797413|gb|EEM44593.1| Sphingomyelinase C [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228821708|gb|EEM67709.1| Sphingomyelinase C [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326938397|gb|AEA14293.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 348

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 101/307 (32%), Gaps = 37/307 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N        N        +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTY 317

Query: 292 --LSDHC 296
              SDHC
Sbjct: 318 NDYSDHC 324


>gi|87119222|ref|ZP_01075120.1| hypothetical protein MED121_13170 [Marinomonas sp. MED121]
 gi|86165613|gb|EAQ66880.1| hypothetical protein MED121_13170 [Marinomonas sp. MED121]
          Length = 449

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 88/288 (30%), Gaps = 27/288 (9%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + ++ ++++N   L       L   + K T+     + +Y  +   D+V  QE+      
Sbjct: 176 SNELNVLTYNTWAL-------LPPLASKNTSDRLDTIAEYMTHY--DVVVFQEVFDP--- 223

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +           T   +          +     +  +      Q   +  A       
Sbjct: 224 --ILTAKFRAKVAQTYPYMTQIPWQVGKILTGGSFIASRWPI-EAQDAVVYDACRGDGCL 280

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKK 199
             +      +        +   H  +               ++  +Q   LK +I  ++ 
Sbjct: 281 AAKGMNYAKIRKGSNVFHIFGTHTHA--------YASEQDITVRFEQLAQLKRFIESKQI 332

Query: 200 ESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDS--LIRFPKEKDSRCNANKNLRNKIP 256
               P ++AGDFN  KINY   + DF   ++  +      +P       N   +      
Sbjct: 333 PYQEPVIMAGDFNVDKINYPQEHLDFLALLNATEPEATGAYPYSYAGPVNIYADEAFNEY 392

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +DY +   +       E+      + D    +   LSDH P+   + F
Sbjct: 393 LDYVLYSNDHIAPYASENKMLTPRSIDSQHWQSWDLSDHYPVEGRFAF 440


>gi|167583843|ref|ZP_02376231.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu]
          Length = 604

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 88/316 (27%), Gaps = 47/316 (14%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKNSVKR---TTSDYTL----LRQYAKNLDADIVFLQEM 74
            VR+ S+N+ N  +       +     R   T +D+      +    + L AD++ L E+
Sbjct: 263 DVRIASFNVFNYFNGDGRGGGFDAPANRGAKTPADFARQEAKIVATLRALRADVIGLMEI 322

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            +         +          R++     R   + I  A+    + V       P   A
Sbjct: 323 ANNGYGDASAVRRLAAQLGDGWRVVEPGAARLGGDAIAVALLYDSRTVE------PAGRA 376

Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLS 185
                 + NR  +          + + V   HLKS    ++       +       +  +
Sbjct: 377 ATLAIGSLNRPPLAQTFTRIGGTRAVTVAVNHLKSKNCPNAAGADLDQADGQGCWNATRT 436

Query: 186 QQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A+ +  W+       +    ++ GD N             + ++         +    
Sbjct: 437 RAAERIAGWLAGNPTGATAEGVLLIGDLNSYAKEDPI-----RALEARGYANLVARFHGD 491

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------- 289
              +         +D+ +        +       I  +E                     
Sbjct: 492 DAYSYVFGGEAGYLDHALATSTLAARVKAVHAWHINADEPVALQYTPGYKTREQQARYYA 551

Query: 290 ---KRLSDHCPISIDY 302
               R SDH PI ID 
Sbjct: 552 PDPYRSSDHDPIVIDL 567


>gi|330875089|gb|EGH09238.1| exonuclease III [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 270

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 80/312 (25%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  +N  +        G +     +  R
Sbjct: 41  ------QFPLADVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFEGDDEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + NG+ + +++       F       +        +  + L+  +     +  
Sbjct: 91  FIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGHFSNDQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++ + +     +  F     
Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLYP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +        +            D      ++
Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++  
Sbjct: 259 PSDHAPIWLELS 270


>gi|17227772|ref|NP_484320.1| hypothetical protein alr0276 [Nostoc sp. PCC 7120]
 gi|17135254|dbj|BAB77800.1| alr0276 [Nostoc sp. PCC 7120]
          Length = 2348

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/331 (14%), Positives = 96/331 (29%), Gaps = 51/331 (15%)

Query: 15   PCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDA 66
              T  V   +++ S+N+ N  +     S + +  +R   +                 L+A
Sbjct: 1733 ATTPDVGGTLKVASFNVLNYFNGDGTGSGFTSPEQRGAENLTEFNRQREKTIAAILGLNA 1792

Query: 67   DIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKN 120
            D+V L E+ +      +A+  +           T   IN        D I      +  +
Sbjct: 1793 DVVGLIEIENDGYGANSAIQDLINGLNAVAGAGTYAFINPGLSQLGTDAIAVGFIYKPNS 1852

Query: 121  VR-VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKS-----FCFLDS 172
            V  V   +    G         NR+ +      N  G++   +  H KS         D+
Sbjct: 1853 VTPVGVAATVADGFGQGAFDNNNRKPLAQTFRQNSTGEQFTAVINHFKSKGSSSGNPGDA 1912

Query: 173  LENTYS-PSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                    S    ++ +Q L  W+       +   ++I GD N             + ++
Sbjct: 1913 DAGDGQGLSNGTRTRASQDLAAWLATNPTGTTDTDYLILGDLNAYAQEDPI-----RALE 1967

Query: 230  PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                    P        +         +D+ + + +    +       I  +E ++    
Sbjct: 1968 NAGYNNLLPN----TTYSYVFDGQWGALDHALANASLASQVSTAVKWHINADEPNVLDYN 2023

Query: 290  -----------------KRLSDHCPISIDYD 303
                              R SDH P+ +  +
Sbjct: 2024 TNFKSVGQQTSLYSPDAFRSSDHDPVIVGLN 2054


>gi|270339913|ref|ZP_06006433.2| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270333322|gb|EFA44108.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 262

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 89/311 (28%), Gaps = 71/311 (22%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M  K  L L+F L    A+ AQ      +R++++N+                    +   
Sbjct: 1   MKNKITLILLFLLCVAHATTAQKKDTITLRVMTYNLRFG---------------ELASLE 45

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN----HSKRDSNNDIH 111
            +  + ++   D+V LQE+       +   +N      +          + K       +
Sbjct: 46  DIAAHIRSFKPDLVALQEVDCKTYRERAPKQNGRDFISTLAYHTGMLGLYGKTIEYRKGY 105

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             I +  +   +  +   L        +   R  +   +EI+G  +     HL  F    
Sbjct: 106 YGIGLLTRFPYIDMEKVMLPNPL----QKEPRALLRANLEIDGDTVIFAVTHLDVF---- 157

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---WKTI 228
                   S +  + QA+++  +  +      P +I GDFN               W  +
Sbjct: 158 --------SEANRTTQAKYINQYFARCP---YPVIIGGDFNAAPTEECIKQTMKASWANL 206

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
             ++                      I IDY          ++                 
Sbjct: 207 TNDEL-------------TFHTSNPTIKIDYLFGRPMNGWTVVDTQTIHSC--------- 244

Query: 289 GKRLSDHCPIS 299
              LSDH PI 
Sbjct: 245 ---LSDHRPIL 252


>gi|126173135|ref|YP_001049284.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS155]
 gi|125996340|gb|ABN60415.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS155]
          Length = 870

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 102/378 (26%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66
             + +    +R+ S+N+       +G     +   R              +      ++A
Sbjct: 455 APSVATKGDLRVASFNVLNFFNDVDGGDTNPSGSNRGALTLEEMVLQRTKIVSAITAMNA 514

Query: 67  DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +     K               P+N +     T       K    + I   
Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTPENAYSFVEITYADKYDGKYFGTDAITVG 574

Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                  + ++       +  + A  R ++    +I+ +
Sbjct: 575 MLYRGGKVTLAGAAQAIETPEQHASAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 SLTVVVNHLKSKGSGCLEDWANFEESVDPADQQGKCNAFRVSAAKVLGEMLKDVKGDLLI 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  DF+   +        W T+D                 +    K
Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSDRDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANASLAKRLVDIEDWHINSVESNLFEYGKKFSGDLAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ +   +
Sbjct: 815 ENAFSASDHDPVIVALSY 832


>gi|77459871|ref|YP_349378.1| exonuclease III [Pseudomonas fluorescens Pf0-1]
 gi|77383874|gb|ABA75387.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf0-1]
          Length = 270

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 80/313 (25%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVHDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +         H  +A+  +   +          +D+      R
Sbjct: 41  ------QFPLEEVRALGYHVYFHGQKGHYGVALLSRQEPIAVHKGFATDEEDA-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     + NG  + +++       F       +        +    L+  +  +  + 
Sbjct: 90  RFIWGTFADANGVPVTIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFHNE 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            P V+ GD N                        ++L    ++   +        F    
Sbjct: 145 QPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSFLPEEREWMARLKNWGLTDSFRHLN 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +        +            D      +
Sbjct: 205 PDVTDTFSWFDYRSRGFEDEPKRGLRIDVILASHGLLPRVKAAGV-------DYELRGME 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI ++  
Sbjct: 258 KPSDHAPIWLELS 270


>gi|118580060|ref|YP_901310.1| exonuclease III [Pelobacter propionicus DSM 2379]
 gi|118502770|gb|ABK99252.1| Exodeoxyribonuclease III [Pelobacter propionicus DSM 2379]
          Length = 270

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 82/314 (26%), Gaps = 78/314 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++VS+N+N L                 S    L         +I+ LQE  +       
Sbjct: 1   MKIVSFNVNGL----------------RSRLHQLEALINAQRPEIIALQETKVRDEEFPV 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + + +                 H  +A+  +      Q    LG       A 
Sbjct: 45  DAVQSLGYHVVFH------------GQKTHYGVALLSRLPLQDVQ----LGLPGDGDEAQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +   +G  + V++       F       ++       +    L   +  + + 
Sbjct: 89  KRFIAATIPLSDGTPVRVIN-----GYFPQGENRDHAVKFPAKQRFYAELLGHLQGECDP 143

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P V+ GDFN                          L     +++ +        F + 
Sbjct: 144 ATPLVVLGDFNVAPRDMDLGIGTDNVKRWLKSGKCCFLPEERLWFECLIEWGLHDSFREL 203

Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
             +  +       +             ID+ ++ ++                 D      
Sbjct: 204 NPAVADRFSWFDYRSRGFEGEPKRGLRIDHILLTRSLLARCRAAGI-------DYDIRSM 256

Query: 290 KRLSDHCPISIDYD 303
            + SDHCP+ ++ +
Sbjct: 257 AKPSDHCPVWVEIE 270


>gi|313158155|gb|EFR57560.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 302

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 95/327 (29%), Gaps = 49/327 (14%)

Query: 2   IRKYVLALVFFLVPC---------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
           +++++ ++                + +   ++ ++S+NI   +  +             +
Sbjct: 1   MKRFLFSIALLFTALAGCSNHEGESTAPKSELNVMSYNIRYANASDKGDAA------WDA 54

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
                    +++  D++ +QE     A   +     +  +Y      +            
Sbjct: 55  RKEASVAMIRDVKPDVIGMQEPRFSQAQYLIGELTEYEHYYLAPDDKDSQH-------RN 107

Query: 113 AIAVRKKNVRVLQQSYPLLGAKD------SFSRAGNRRAVELLV--EINGKKIWVLDIHL 164
           A+  RK    +L Q Y  L  KD       +     R A+ + +     GK+ +  + HL
Sbjct: 108 AVWWRKDRFEMLAQGYFFLNEKDITQPIKGWGHNQFRTALWVKLRERSTGKEFFFFNTHL 167

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
                     +    +    ++  + + + + Q      P  + GD N            
Sbjct: 168 AHRASPVEGGDIDQVA---RTESVKLIVEQMKQIAGRYAPIFVTGDMNASYAAGDGRRTC 224

Query: 225 WKTIDP--NDSLIRFPKEKDSRCNANK-----NLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                     +    P  +     +         R    ID+    +     +    F  
Sbjct: 225 LDGFFEFMWSARETAPDGEADDVYSYNNFGEGTPRFTWNIDHIFYRK-----VTPVRFRT 279

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
           I  +   +      +SDH PI    +F
Sbjct: 280 INNDGYGVP----YISDHFPILFTSEF 302


>gi|148255795|ref|YP_001240380.1| exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1]
 gi|146407968|gb|ABQ36474.1| Exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1]
          Length = 263

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 91/304 (29%), Gaps = 69/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  + K    DIV LQE+   +     
Sbjct: 1   MRIATWNVN----------------SVRQRIEHLVTWLKECSPDIVCLQEIKCTDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K      +S      +D  +R    
Sbjct: 42  -------FPRLEIEALGYNVVTHGQKTFNGVALLSKLPFDETRSGLDGDVEDVHARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V +    + +  ++L +    ++ +  Y        +    L+D+  ++ ++  
Sbjct: 92  --LEGVVSLKHGVVRIACLYLPNGNPPNTEKYPYK------LKWMSRLRDYTRERLKTEE 143

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGDFN                         + ++ +             D+     
Sbjct: 144 PLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESFQALLGLGLTDALRAVTDAP-GQY 202

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L++          D      ++ SDH P+ 
Sbjct: 203 TFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGI-------DSYVRAWEKPSDHVPVW 255

Query: 300 IDYD 303
            D+D
Sbjct: 256 ADFD 259


>gi|332820251|ref|XP_003310517.1| PREDICTED: nocturnin [Pan troglodytes]
          Length = 365

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 22/293 (7%)

Query: 23  KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78
            +R++ WNI    L E ++          +      L+ +       DI+ LQE+  Y +
Sbjct: 76  PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 135

Query: 79  AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +  +  +   +  +          +N     A+   +   +++  +   L A    
Sbjct: 136 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 195

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196
           +      A  L  + +G++  +   HLK+           +      S Q    L++   
Sbjct: 196 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 244

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253
             + + +P ++ GDFN +            +++ N +      +  S             
Sbjct: 245 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSG 304

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 305 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 357


>gi|257092446|ref|YP_003166087.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044970|gb|ACV34158.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 255

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 82/304 (26%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N+L                      L  +      DIV LQE          
Sbjct: 1   MKIASWNVNSL----------------KVRLPQLLDWLAAEQPDIVCLQET--------- 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    S    +  +A+  +      +S   +   +       +
Sbjct: 36  -KLEDHAFPQQEVEAAGYHVAFSGQKTYNGVALLAR------ESPSDVVCGNPLHADQQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R V   +      I V+  ++ +   + S +  Y  +          L  W+  +  +  
Sbjct: 89  RLVAATI----GGICVVCAYVPNGQAVGSDKYAYKLA------WLDALTRWLKGRLAANP 138

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+AGDFN                           ++ +     L    +  +    + 
Sbjct: 139 RLVVAGDFNIAPEDRDVYNPAAWAGQILCSAPERAAFQRLLDLG-LKDSFRLFEQPEKSF 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++ +                  +    + +R SDH P++
Sbjct: 198 SWWDYRMLGFQKNQGLRIDHILLSEPLAGICTVAGI-------NRHMRKLERPSDHAPVT 250

Query: 300 IDYD 303
            +  
Sbjct: 251 AELT 254


>gi|62858061|ref|NP_001016531.1| CCR4 carbon catabolite repression 4-like [Xenopus (Silurana)
           tropicalis]
 gi|89267365|emb|CAJ82796.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Xenopus
           (Silurana) tropicalis]
 gi|213627135|gb|AAI70786.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Xenopus
           (Silurana) tropicalis]
          Length = 458

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 96/299 (32%), Gaps = 22/299 (7%)

Query: 17  TASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           + S  +  R++ WNI    L E ++   +      +      L+ +       D++ LQE
Sbjct: 163 SGSQPRSFRVMQWNILAQALGEGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQE 222

Query: 74  MGSY-NAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +  Y +    +  +  +   F +           +N     A+   +   R++  +   L
Sbjct: 223 VDHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFRLVNSAKIRL 282

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQW 190
            A+   +      A  L     G+ +     HLK+           +        Q +  
Sbjct: 283 SARTLKTN-QVAIAETLQCCETGRLLCFAVTHLKA----------RTGWERFRLAQGSDL 331

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L +  +  + + VP +I GDFN +            +++ N +     ++ +S       
Sbjct: 332 LHNLESITEGATVPLIICGDFNAEPTEEVYKRFASSSLNLNSAYKLLSEDGESEPPYTTW 391

Query: 251 L-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  +   +DY    Q+A +               +        SDH  +  D+ F
Sbjct: 392 KIRPTGESCHTLDYIWYSQHALRVNSALGLPTEEQIGPNRLPSFNYPSDHLSLVCDFSF 450


>gi|153839235|ref|ZP_01991902.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ3810]
 gi|149747230|gb|EDM58218.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ3810]
          Length = 434

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 90/294 (30%), Gaps = 42/294 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78
           Q ++L+++NI  L                   Y L+  Y K    D++ LQE+ +     
Sbjct: 168 QNLKLMTYNIWALPAIASHIGD---------RYELIPDYVKGY--DVLALQEVFASGRDA 216

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + ++     +      +         +  D    I  R   V   Q  +P     D F+
Sbjct: 217 FLRELAKDYPYQTKMLDKDD------FNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFA 270

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                      +   G+   V   H  SF    + E           QQ + +   +   
Sbjct: 271 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSLN-- 320

Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251
             +    V +GDFN   + + G+       +   +    +     S  +   N       
Sbjct: 321 IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEPQ--YSGYTASTFDPRINNFAGEAL 378

Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N   +DY ++          ++  ++  +  +   +   LSDH P+S   
Sbjct: 379 SGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVI 432


>gi|227538655|ref|ZP_03968704.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227241574|gb|EEI91589.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 258

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 86/289 (29%), Gaps = 52/289 (17%)

Query: 16  CTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           C+     Q ++++S+NI+  +      +          D   + +  +   AD+V LQE+
Sbjct: 17  CSPVFGQQPLKILSYNIHHGNPPSKPGI---------IDLEAIAKVIRTSGADVVGLQEI 67

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                 ++   +       +  +    SK            +  K      +   L    
Sbjct: 68  DVNVGRSEHVDQAKKLAELAGMKYYFFSKGIDLEKGEYGTLILSKFPITNTERLELPMP- 126

Query: 135 DSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
               ++  R      ++I  GK+I   + HL                      QA+++  
Sbjct: 127 ---VKSEMRSLGIAKIKIPSGKEILFANTHLDLK-------------EENRIAQAKFI-- 168

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            +   +++    V+ GD N +                      F + +         +  
Sbjct: 169 -VNHFQDTKHLVVLVGDLNAQPQSEPIKIL----------GDFFKRSEVPNGFTIPEVNP 217

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              ID+ +++++        +  E  Y            SDH P+  + 
Sbjct: 218 NREIDFIMVNKSKNPKFQNHTVIEESY-----------ASDHRPVYAEL 255


>gi|228956424|ref|ZP_04118235.1| Sphingomyelinase C [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228803257|gb|EEM50065.1| Sphingomyelinase C [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 348

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 100/307 (32%), Gaps = 37/307 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQTDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                       N        +DY +  ++       E+      +     +   +    
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKYTY 317

Query: 292 --LSDHC 296
              SDHC
Sbjct: 318 NDYSDHC 324


>gi|254254895|ref|ZP_04948212.1| hypothetical protein BDAG_04216 [Burkholderia dolosa AUO158]
 gi|124899540|gb|EAY71383.1| hypothetical protein BDAG_04216 [Burkholderia dolosa AUO158]
          Length = 607

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 92/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R    Y         +    K LDAD++ L E+ 
Sbjct: 297 LRVASFNVLNYFNGNGVGGGFDDPDNRGAKTYQEFLRQDAKIVSALKALDADVIGLMEIQ 356

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         +       S  R+++    R   + I  A+    + V       P+  A 
Sbjct: 357 NNGYGELSAVRQLAAKLGSHWRVVDPGTPRLGGDAIAVAMIYDSRKVE------PVGRAA 410

Query: 135 DSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + +   HLKS    D+  +            +  ++
Sbjct: 411 TLAIDDKNRQPLAQSFRRIGGKQALTIAVNHLKSKNCPDAANDDLDQGDGQGCWNATRTR 470

Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  L DW+       +    ++ GDFN             + ++         +   + 
Sbjct: 471 AAAKLADWLAGTPTGVAGQGVLLIGDFNSYTFEDPI-----RVLEARGYRNLVSRWVGAD 525

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 526 AYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPIALQYTLAYKSAEQQNTYYAP 585

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ +D 
Sbjct: 586 DAYRSSDHDPVLVDI 600


>gi|31083028|ref|NP_036250.2| nocturnin [Homo sapiens]
 gi|212276446|sp|Q9UK39|NOCT_HUMAN RecName: Full=Nocturnin; AltName: Full=CCR4 protein homolog
 gi|109731055|gb|AAI13495.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Homo
           sapiens]
 gi|109731718|gb|AAI13501.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Homo
           sapiens]
 gi|119625534|gb|EAX05129.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform
           CRA_a [Homo sapiens]
 gi|119625536|gb|EAX05131.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform
           CRA_a [Homo sapiens]
          Length = 431

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 22/293 (7%)

Query: 23  KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78
            +R++ WNI    L E ++          +      L+ +       DI+ LQE+  Y +
Sbjct: 142 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 201

Query: 79  AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +  +  +   +  +          +N     A+   +   +++  +   L A    
Sbjct: 202 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 261

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196
           +      A  L  + +G++  +   HLK+           +      S Q    L++   
Sbjct: 262 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 310

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253
             + + +P ++ GDFN +            +++ N +      +  S             
Sbjct: 311 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSG 370

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 371 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423


>gi|288929073|ref|ZP_06422919.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288330057|gb|EFC68642.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 313

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/314 (10%), Positives = 77/314 (24%), Gaps = 33/314 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L   L    A+  Q + L S+NI   ++ +     +           ++         
Sbjct: 13  LLLGVVLCMAFAAFGQTLVLGSYNIRYRNDGD-----EAKGHLWAKRCQVIADQLNYHHP 67

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D    QE+        +     +          + +   +          +  +      
Sbjct: 68  DAFGAQEVLKGQLDDLLRALPDYDYVGVGRDDGHEAGEYAPIFYRRDRLDKLSDGYFWLS 127

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                     +  A  R        +       L  +L +                   +
Sbjct: 128 PT-YTTPSLGWDAACIRICTWAKFRVRESGEVFLFFNLHTDHVG----------VKARRE 176

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            A+ +   I       +P V+ GDFN                  +  ++   +  ++   
Sbjct: 177 SAKLVMKAIDGLGGKDMPVVLTGDFNVDQTDETYAIFTANARLNDAYVVAKHRFAENGTF 236

Query: 247 ANKNL--RNKIPIDYFVMDQNAYK---------------FLIQESFSEILYNEDDIKSRG 289
            + +   +    ID+  +                         +   +     D  + R 
Sbjct: 237 NSFDPTLKTTSRIDHVFVSPRFAVARYGVLPNFYWTEEPAAKSQKGQDAPQQIDFKQHRI 296

Query: 290 KRLSDHCPISIDYD 303
           +  SDH P+ ++ +
Sbjct: 297 RTASDHYPVFVEVN 310


>gi|27379872|ref|NP_771401.1| exonuclease III [Bradyrhizobium japonicum USDA 110]
 gi|27353025|dbj|BAC50026.1| exonuclease III [Bradyrhizobium japonicum USDA 110]
          Length = 273

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 99/314 (31%), Gaps = 69/314 (21%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +P   +V   +R+ +WN+N                       LL  + K    DIV LQE
Sbjct: 1   MPLPGAVEMPIRVATWNVN----------------SVRQRIDLLLTWLKECQPDIVCLQE 44

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +     V + FP+            + ++           +A+  K      +S      
Sbjct: 45  I---KCVDEAFPRLE-------IEALGYNVVTHGQKTFNGVALLSKLRFDETKSGLAGDD 94

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           +D+ +R      +E +V +    + +  ++L +   + + +  Y        +    L +
Sbjct: 95  EDAHARF-----LEGVVTLKHGVLRIACLYLPNGNPVGTEKYPYK------LKWMSRLLE 143

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFP 238
           +  ++ ++  P ++AGDFN   +    ++                 ++++          
Sbjct: 144 YSKERLKTEEPLILAGDFNVIPHARDVHNPAAWTEDALFKTETRESFQSLLGLGLTDALR 203

Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
              D           +           ID+ ++   A   L            D      
Sbjct: 204 AVTDEP-GLYTFWDYQAGAWQKNHGLRIDHLLLSPQASDRLANVGI-------DSYVRAW 255

Query: 290 KRLSDHCPISIDYD 303
           ++ SDH P+  D D
Sbjct: 256 EKPSDHVPVWADLD 269


>gi|221197415|ref|ZP_03570462.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
 gi|221204089|ref|ZP_03577107.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221176255|gb|EEE08684.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221183969|gb|EEE16369.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
          Length = 603

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 88/315 (27%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+       G+    +                   +    K LDAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTYQEFQRQEAKIVSALKALDADVIGLMEIQ 352

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   + R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELSAVRQLAAKLGGAWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 406

Query: 135 DSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + ++  HLKS    D+  +               ++
Sbjct: 407 TLAIDDKNRQPLAQSFRRIGGKQALTIVVNHLKSKNCPDATNDDLDQGDGQGCWNPTRTR 466

Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  L DW+       +    ++ GDFN             + ++         +   + 
Sbjct: 467 AAAKLADWLAGTPTGVAGQGVLLIGDFNSYTYEDPI-----RLLESRGYRNLVSRWIGAN 521

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------------- 288
             +         +D+ +        +       I  +E                      
Sbjct: 522 AYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPVALQYTLAYKSAEQQQTYYAP 581

Query: 289 -GKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 582 DAYRSSDHDPVLIDI 596


>gi|73984049|ref|XP_540938.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Canis familiaris]
          Length = 474

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 84/297 (28%), Gaps = 20/297 (6%)

Query: 18  ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            S    +R++ WNI    L E ++          +      L+ +       DI+ LQE+
Sbjct: 180 PSSHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEV 239

Query: 75  GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             Y +    +  +  +   +  +          +N     A+   +   +++  +   L 
Sbjct: 240 DHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 299

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A    +      A+   +E                          +  C         L+
Sbjct: 300 AMTLKTNQ---VAIVQTLECKESSRQFCIAVTHLKARTGWERFRSAQGC-------DLLQ 349

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +     + + +P ++ GDFN +            +++ N +      +  S         
Sbjct: 350 NLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKI 409

Query: 253 N-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 410 RTSGECRHTLDYIWYSKHALSVKSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 466


>gi|161521728|ref|YP_001585155.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC
           17616]
 gi|189352108|ref|YP_001947735.1| putative extracellular endonuclease/exonuclease/phosphatase
           [Burkholderia multivorans ATCC 17616]
 gi|160345778|gb|ABX18863.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC
           17616]
 gi|189336130|dbj|BAG45199.1| putative extracellular endonuclease/exonuclease/phosphatase
           [Burkholderia multivorans ATCC 17616]
          Length = 603

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 88/315 (27%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+       G+    +                   +    K LDAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTYQEFQRQEAKIVSALKALDADVIGLMEIQ 352

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   + R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELSAVRQLAAKLGGAWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 406

Query: 135 DSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + ++  HLKS    D+  +               ++
Sbjct: 407 TLAIDDKNRQPLAQSFRRIGGKQALTIVVNHLKSKNCPDATNDDLDQGDGQGCWNPTRTR 466

Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  L DW+       +    ++ GDFN             + ++         +   + 
Sbjct: 467 AAAKLADWLAGTPTGVAGQGVLLIGDFNSYTYEDPI-----RLLESRGYRNLVSRWIGAN 521

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------------- 288
             +         +D+ +        +       I  +E                      
Sbjct: 522 AYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPVALQYTLAYKSAEQQQTYYAP 581

Query: 289 -GKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 582 DAYRSSDHDPVLIDI 596


>gi|297674359|ref|XP_002815200.1| PREDICTED: nocturnin-like [Pongo abelii]
          Length = 431

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 22/293 (7%)

Query: 23  KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78
            +R++ WNI    L E ++          +      L+ +       DI+ LQE+  Y +
Sbjct: 142 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 201

Query: 79  AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +  +  +   +  +          +N     A+   +   +++  +   L A    
Sbjct: 202 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 261

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196
           +      A  L  + +G++  +   HLK+           +      S Q    L++   
Sbjct: 262 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 310

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253
             + + +P ++ GDFN +            +++ N +      +  S             
Sbjct: 311 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSG 370

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 371 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423


>gi|242239395|ref|YP_002987576.1| exodeoxyribonuclease III [Dickeya dadantii Ech703]
 gi|242131452|gb|ACS85754.1| exodeoxyribonuclease III [Dickeya dadantii Ech703]
          Length = 268

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 81/312 (25%), Gaps = 75/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE   ++ V   
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAVIEQHQPDVIGLQETKVHDDV--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +         H  +A+  +N  +  +       +D+      R
Sbjct: 42  -------FPLEDVAKFGYHVFYHGQKGHYGVAMLTRNTPLAVRRGFPTDEEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E     + V++       F       +       ++  Q L+ ++     +  
Sbjct: 90  RIIMADLETPLGTLTVIN-----GYFPQGESRDHPVKFPAKTRFYQDLQHYLEHHHNAEQ 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N                               +   + +     +  F  + 
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWMLR-LQDWGLVDTFRAQN 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  Q                  D      ++ 
Sbjct: 204 PECRDRFSWFDYRSSGFDDNRGLRIDLILASQPLASRCSATGI-------DYAIRSMEKP 256

Query: 293 SDHCPISIDYDF 304
           SDH PI  ++ F
Sbjct: 257 SDHAPIWAEFAF 268


>gi|271964770|ref|YP_003338966.1| extracellular nuclease-like protein [Streptosporangium roseum DSM
           43021]
 gi|270507945|gb|ACZ86223.1| extracellular nuclease-like protein [Streptosporangium roseum DSM
           43021]
          Length = 795

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 96/315 (30%), Gaps = 40/315 (12%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +P    V   V++ S+N        G     N+ ++       L    K ++AD+V L E
Sbjct: 490 LPAPFPVLGNVKVASFNTLNWFTTLGSRGASNAGEQ-QRQLAKLVAALKGMNADVVGLME 548

Query: 74  MGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           + +    AV  +       +   T   + H    ++  IH A+  +   ++++       
Sbjct: 549 VQNNGQTAVQALVDALNAEVGAGTYAALAHPYPGTDL-IHVAMIYKPGRLQLV------G 601

Query: 132 GAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCS------- 182
            A+ S      R  +         G+   ++  H KS    D      +           
Sbjct: 602 AAQSSADPVFRRPPLIQTFRRVQGGQPFTMIVNHFKSKGCDDEATGPDADQGDGQSCYNG 661

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              +QA+     I   +      ++ GD N        +     T++         +   
Sbjct: 662 ERVRQAEATLGLIDSLELPNP--LVLGDLNAYGEEDPID-----TLETGGLTSVTKRFVP 714

Query: 243 SR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------ 289
           +    +         +D+ ++ +   K +   +   I  +E  I                
Sbjct: 715 APLRYSYLYEGQLGELDHALVGKALLKRVTSATIWHINADESRILDYNTEYNPPALYRPD 774

Query: 290 -KRLSDHCPISIDYD 303
             R SDH P+ I   
Sbjct: 775 AFRSSDHDPVVIGLT 789


>gi|217969881|ref|YP_002355115.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T]
 gi|217507208|gb|ACK54219.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T]
          Length = 254

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 78/301 (25%), Gaps = 70/301 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  +      D + LQE          
Sbjct: 1   MKIATWNVNSL----------------KVRLPQVLDWLAANQPDALCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +         +  +A+              +           +
Sbjct: 35  LKLEDKAFPLAELEAAGYHAVFIGQKTYNGVAILSPQPIDAATVVRNIPG----FEDEQK 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V+  +  +   + S +  Y        +    L +W+  + ++  
Sbjct: 91  RIIAATI----AGVRVVCGYFPNGQAVGSDKFEYK------LRWLAALTEWLRAELKTHE 140

Query: 204 PFVIAGDFNRKINYLG-------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             V+AGDFN                         ++ +     +  F +  +    A   
Sbjct: 141 RLVLAGDFNIAPEDRDAHPDWKDEIHVSAPERAAFRALQELGLIDAF-RLFEQPERAFSW 199

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ++          ID+ ++                    D    R +R SDH P+ ++
Sbjct: 200 WDYRMMAFRRNFGLRIDHLLVSPALRAACRNC-------VVDKEPRRLERPSDHAPVVLE 252

Query: 302 Y 302
            
Sbjct: 253 L 253


>gi|330965345|gb|EGH65605.1| exonuclease III [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 270

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 80/312 (25%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  ++  +        G +     +  R
Sbjct: 41  ------QFPLADVEALGYHVHFHGQKGHYGVALLSRSPPLALHK----GFEGDDEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + NG+ + +++       F       +        +  + L+  +     +  
Sbjct: 91  FIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGHFSNDQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++ + +     +  F     
Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLYP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +        +            D      ++
Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++  
Sbjct: 259 PSDHAPIWLELS 270


>gi|315506688|ref|YP_004085575.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|315413307|gb|ADU11424.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 320

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 98/314 (31%), Gaps = 33/314 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  + +++WN+  L   E      ++    T+  T L        AD+V LQE+GS  A 
Sbjct: 2   ANNLIVMTWNVENLFPPED--TDTSAADTYTAKLTYLAGLIVGTGADVVALQEIGSLRAA 59

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-R 139
             +                +             +    + + +     P +   D  +  
Sbjct: 60  QDLQAALGEPWQAVVSSHPDSRGIRVAVLARHPLTEEAQILALPPSGLPAVPDVDGDTLT 119

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSF--CFLDSLENTYSPSCS---------LLSQQA 188
              R A+++ V+  G  + +L  HLKS    + D      +               + +A
Sbjct: 120 HMGRGALQVHVDCGGVGLRLLTAHLKSKLLTYPDGRRYPLNEDERARGAGYALLRRTAEA 179

Query: 189 QWLKDWITQKKE-------SLVPFVIAGDFNRKIN-------YLGNNDDFWK--TIDPND 232
             L+  + +            +P ++ GD N   +           + D  +    D   
Sbjct: 180 VALRVHLNKALAAAAVNGQPGMPTILCGDLNDGPDAITTVLLEGPADGDVNRPDKGDAVR 239

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR- 291
                 +   +R  +     N   ID+ +  ++    LI               +R ++ 
Sbjct: 240 LYNLGRRLPPARAYSRIYQGNGELIDHILATRDLQLQLITIDSLVDDITSIGASTRSRKK 299

Query: 292 --LSDHCPISIDYD 303
             + DH P+   ++
Sbjct: 300 TVVPDHAPVIARFN 313


>gi|254445739|ref|ZP_05059215.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
 gi|198260047|gb|EDY84355.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
          Length = 278

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 64/299 (21%), Gaps = 28/299 (9%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            +++  L        +  A ++ L ++N+      +G         +  +    +     
Sbjct: 1   MRFLNPLAALFFLVASVSATELTLSTYNLRLEIASDG-------PNQWENRREQVANQIA 53

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
            L  DI+ +QE               +            +   S      +      +  
Sbjct: 54  FLAPDILGVQEALPQQVDYLEQNLAGYSYIGVGRHDGIRAGEHSAIYYRDSTTELLDSST 113

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                 P       +     R            K      +                   
Sbjct: 114 FWLSPTPDTP-SYGWGVHYRRICTYGHFRDRQTKTTYWVFNTHF----------DHEMPE 162

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                A+ + D I        P  + GD N   +         K  D            +
Sbjct: 163 ARLNGAKLILDRIATLVSPNEPHFLMGDLNATPDSPPIKLISAKLQDTRLHSTGPVFGSE 222

Query: 243 SRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              NA          IDY                +   Y        G+  SDH PI I
Sbjct: 223 GTFNAFDPTTIPTRRIDYIFASPEN---------TITAYATLSDLIDGRYPSDHFPIVI 272


>gi|15965272|ref|NP_385625.1| putative exodeoxyribonuclease III protein [Sinorhizobium meliloti
           1021]
 gi|307309295|ref|ZP_07588963.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
 gi|307317036|ref|ZP_07596477.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
 gi|15074452|emb|CAC46098.1| Putative exodeoxyribonuclease III [Sinorhizobium meliloti 1021]
 gi|306897124|gb|EFN27869.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
 gi|306900296|gb|EFN30913.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
          Length = 263

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 69/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L  + +  + DI  LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARLDGLVGWLRESNPDIACLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  SR    
Sbjct: 41  ------TFPRGEIEALGYHVETHGQKGFNGVALLSKVRPDEINRGLPGDPADEQSRF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +  +NG  + V  ++L +   +++ +  Y  +        + L  +  Q+     
Sbjct: 92  --IEGVFSVNGGALRVCCLYLPNGNPVETEKYPYKLA------WMRRLAAFAEQRLVLEE 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N                   YL      ++ +  N       +         
Sbjct: 144 PLILAGDYNVIPEAHDCWDVKVWRNDALYLPETRAAFRRL-RNLGFTDAVRATSDEAPLY 202

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L+  S  + +          ++ SDH P++
Sbjct: 203 SFWDYQAGCWQKNFGIRIDHLMLSPEAADKLVSTSIEKHV-------RAWEKPSDHVPVT 255

Query: 300 IDYDF 304
            ++ F
Sbjct: 256 AEFAF 260


>gi|194365350|ref|YP_002027960.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
 gi|194348154|gb|ACF51277.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
          Length = 284

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 78/282 (27%), Gaps = 29/282 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++S+N+                KR       + +   +    ++  QE+    A   
Sbjct: 29  PLKVMSFNVR-------TPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQELVKEQADYL 81

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  F    R              + +   +++        P +    S+     
Sbjct: 82  SEHLPGYRWFGEGRR-GGSGDEHMGVFYDSKVLTIEESGNFWLSDTPDVPGSISWGNLYP 140

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     +            +        +                A+ +   +     + 
Sbjct: 141 RMVTWAVFRRLDDDRRFYFMDTHLPYRDEDEPRRVKG--------AELIGKRLAS-LPAD 191

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P V+ GDFN +         F + +      ++ P+      +     +    +D+ ++
Sbjct: 192 LPVVLTGDFNSEPG-GDTYKAFSRVLQDTRPQVKAPQGPRLTFHDF-TGKATSQLDWVLV 249

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       F    +  DD +  G   SDH P+ ++ D+
Sbjct: 250 RG----------FHARSFLTDDRRIDGVLPSDHFPLVVELDW 281


>gi|289669936|ref|ZP_06491011.1| nuclease [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 378

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 85/324 (26%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L+L          V   +R+ S+N+       G      +       ++  +    L   
Sbjct: 62  LSLPAMPTVVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 121

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +    A            +       + I+       + I   I 
Sbjct: 122 IVPLGADVAALMELENDGNGADAAVAQLVAALNAAGKDKDWQFIDTGSGPGEDAIRVGIV 181

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSL 173
            R      + +   L G         +R  +       +G    V+  H KS  C   S 
Sbjct: 182 YRSSQATPVGKPATLTGGPFDNH---SRVPLAQAFRSASGATFVVVANHFKSKGCGNASG 238

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L  W+            V+ GDFN              
Sbjct: 239 ADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYALETPMRS---- 294

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +         +D+ ++     K L       I  +  D  
Sbjct: 295 -LRASGWQDAFAVAGVKQPYSFVYDGMSGRLDHALLSPAMAKQLRGAVEWHINADVMDAA 353

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 354 GYAKRNLPGPWRSSDHDPVLLGFS 377


>gi|194208445|ref|XP_001501284.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Equus caballus]
          Length = 450

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 92/298 (30%), Gaps = 22/298 (7%)

Query: 18  ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            S    +R++ WNI    L E ++          +      L+ +       DI+ LQE+
Sbjct: 156 PSSHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEV 215

Query: 75  GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             Y +    +  +  +   +  +          +N     A+   +   +++  +   L 
Sbjct: 216 DHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 275

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWL 191
           A    +      A  L  + + ++  +   HLK+           +      S Q    L
Sbjct: 276 AMTLKTN-QVAIAQTLECKESSRQFCIAVTHLKA----------RTGWERFRSAQGCDLL 324

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           ++     + + +P ++ GDFN +            +++ N +      +  S        
Sbjct: 325 QNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWK 384

Query: 252 RN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 385 IRTSGECRHTLDYIWYSKHALSVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 442


>gi|221210702|ref|ZP_03583682.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD1]
 gi|221169658|gb|EEE02125.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD1]
          Length = 603

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/326 (13%), Positives = 90/326 (27%), Gaps = 50/326 (15%)

Query: 16  CTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNL 64
            TA        +R+ S+N+       G+    +                   +    K L
Sbjct: 282 TTAPARDPHANLRVASFNVLNYFNGNGLGGGFDDPNNRGAKTYQEFQRQEAKIVSALKAL 341

Query: 65  DADIVFLQEMGSYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           DAD++ L E+ +          +    +  +   +   + R   + I  A+    + V  
Sbjct: 342 DADVIGLMEIQNNGYGELSAVRQLAAKLGGAWRVVDPGTSRLGGDAIAVAMIYDSRKVE- 400

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP-- 179
                P+  A        NR+ +          + + ++  HLKS    D+  +      
Sbjct: 401 -----PVGRAATLAIDDKNRQPLAQSFRRIGGKQALTIVVNHLKSKNCPDATSDDLDQGD 455

Query: 180 ----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                    ++ A  L DW+       +    ++ GDFN             + ++    
Sbjct: 456 GQGCWNPTRTRAAAKLADWLAGTPTGVAGQGVLLIGDFNSYTYEDPI-----RLLESRGY 510

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----- 288
                +   +   +         +D+ +        +       I  +E           
Sbjct: 511 RNLVSRWIGANAYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPVALQYTLAYK 570

Query: 289 ------------GKRLSDHCPISIDY 302
                         R SDH P+ ID 
Sbjct: 571 SAEQQQTYYAPDAYRSSDHDPVLIDI 596


>gi|71281061|ref|YP_269348.1| extracellular ribonuclease/nuclease fusion protein [Colwellia
            psychrerythraea 34H]
 gi|71146801|gb|AAZ27274.1| extracellular ribonuclease/nuclease fusion protein [Colwellia
            psychrerythraea 34H]
          Length = 1310

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 94/320 (29%), Gaps = 42/320 (13%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +  +++ S+N+      +G           ++++  T   + +    K ++ADIV L E+
Sbjct: 929  SGSLKVASFNVLNYFNGDGAGQGFPTARGADTLEEFTRQSSKIVSALKEINADIVGLMEL 988

Query: 75   GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQSYPLL 131
             +    +     +      S      ++    +       A+          +      +
Sbjct: 989  ENDGFDSNSAIADLVKQLNSQVGEGTYNYVSLDQTGVGGDAIAVGIIYKPATVGIVGNAV 1048

Query: 132  GAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP-------SCS 182
                S    GNR+ +    +   + +++ +   H KS     S                 
Sbjct: 1049 TTNQSPFDFGNRQPLVQTFKEIASNEELTIAVNHFKSKGSCGSASGNNLDQGDGQGCWNE 1108

Query: 183  LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            L +Q A  L  W+  K    S   F+I GD N        N      I  ++        
Sbjct: 1109 LRTQAANGLTAWLNTKPTGTSDDDFLIIGDLNAYGKEDPIN-----AITNSNYHNLVADY 1163

Query: 241  KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289
              S   +         +D+ +        ++  +   I  +E  I               
Sbjct: 1164 MGSTGYSYSFGGEIGYLDHALASDKLASQVVDTTVWHINADEPRIFDYNTEYKSSEQLST 1223

Query: 290  ------KRLSDHCPISIDYD 303
                   R SDH P+ +  +
Sbjct: 1224 YFAEDAYRASDHDPVIVVLN 1243


>gi|297293391|ref|XP_002804251.1| PREDICTED: nocturnin-like [Macaca mulatta]
          Length = 431

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 22/293 (7%)

Query: 23  KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78
            +R++ WNI    L E ++          +      L+ +       DI+ LQE+  Y +
Sbjct: 142 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 201

Query: 79  AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +  +  +   +  +          +N     A+   +   +++  +   L A    
Sbjct: 202 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 261

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196
           +      A  L  + +G++  +   HLK+           +      S Q    L++   
Sbjct: 262 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 310

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253
             + + +P ++ GDFN +            +++ N +      +  S             
Sbjct: 311 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSG 370

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 371 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423


>gi|332231442|ref|XP_003264906.1| PREDICTED: nocturnin-like [Nomascus leucogenys]
          Length = 601

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 22/293 (7%)

Query: 23  KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78
            +R++ WNI    L E ++          +      L+ +       DI+ LQE+  Y +
Sbjct: 312 PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 371

Query: 79  AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +  +  +   +  +          +N     A+   +   +++  +   L A    
Sbjct: 372 TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 431

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196
           +      A  L  + +G++  +   HLK+           +      S Q    L++   
Sbjct: 432 TN-QVAIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 480

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253
             + + +P ++ GDFN +            +++ N +      +  S             
Sbjct: 481 ITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSG 540

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +  +DY    ++A                 +        SDH  +  D+ F
Sbjct: 541 ECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 593


>gi|238894275|ref|YP_002919009.1| exonuclease III [Klebsiella pneumoniae NTUH-K2044]
 gi|238546591|dbj|BAH62942.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 272

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 80/312 (25%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVARLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +   Q L++++  +  
Sbjct: 91  AQRRIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELN 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++   +     +  + +
Sbjct: 146 KENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLGWGLVDTWRQ 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                         +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPDNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-------DYEIRGME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|119713777|gb|ABL97825.1| hypothetical protein ALOHA_HF1049E08.0013 [uncultured marine
           bacterium HF10_49E08]
          Length = 255

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 96/280 (34%), Gaps = 33/280 (11%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +S+NI      +G + W            L+ +  +N   D++ LQE+            
Sbjct: 1   MSFNIRLGVANDGENHWDKRK-------ELVLKTIQNFGPDLLGLQEVWHMQEEYLKEQL 53

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
           + +  +  + R+                    K         P +    S+  +  R A 
Sbjct: 54  SNYAYYGRSRRMEPVEGEQCAVMYRKDRFEIVKGETFWLSETPEVIESKSWDSSLPRIAN 113

Query: 147 ELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            +L++    N ++I++++ H     F      +   +  LL ++ Q L        +  V
Sbjct: 114 WILLKDKKNNKQEIFLINTH-----FDHKGRESRKQAARLLKKRIQEL--------KGNV 160

Query: 204 PFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
             ++ GDFN + +          K +D      +   E++S  +      +   ID+ + 
Sbjct: 161 RVIVTGDFNAREDSDPYLGLVDGKILDTYRMAHKSRTEEESTLSGWNGRTSGNRIDWVLC 220

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +N         F  +  N D  +  G+  SDH P++   
Sbjct: 221 TRN---------FRVLSANIDRSEFGGRYPSDHYPVTATL 251


>gi|146340991|ref|YP_001206039.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278]
 gi|146193797|emb|CAL77814.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278]
          Length = 263

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 93/304 (30%), Gaps = 69/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  + K    DIV LQE+   +     
Sbjct: 1   MRIATWNVN----------------SIRQRIEHLVTWLKECSPDIVCLQEIKCTDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K      +S     A+D  +R    
Sbjct: 42  -------FPRLEIEALGYNVVTHGQKTFNGVALLSKLPFDETKSGLDGDAEDVHARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V +    + +  ++L +    ++ +  Y        +    L+D+  ++ ++  
Sbjct: 92  --LEGVVSLKSGVVRIACLYLPNGNPPNTEKYPYK------LKWMSRLRDYARERLKTEE 143

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGDFN                         + ++++             D+     
Sbjct: 144 PLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESFQSLLGLGLTDALRAVNDAP-GQY 202

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L++          D      ++ SDH P+ 
Sbjct: 203 TFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGI-------DSYVRAWEKPSDHVPVW 255

Query: 300 IDYD 303
            D+D
Sbjct: 256 ADFD 259


>gi|269929041|ref|YP_003321362.1| Endonuclease/exonuclease/phosphatase [Sphaerobacter thermophilus
           DSM 20745]
 gi|269788398|gb|ACZ40540.1| Endonuclease/exonuclease/phosphatase [Sphaerobacter thermophilus
           DSM 20745]
          Length = 635

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 85/290 (29%), Gaps = 56/290 (19%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V     +   + ++++NI      +                  L +  + +  D+V LQE
Sbjct: 399 VTAGPPLGPDITVITYNIQNGFSIDNYFA-----------LDALARTIEEVHPDVVVLQE 447

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +     V+    +  W   +S    + +    + +D     A+  +   +          
Sbjct: 448 VSRGWLVSSGVDELRW---FSHRLGMPYVFGTNADDGIWGNAILTRAPILEVAHRQYTTT 504

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           ++       R  + + +      +WV   HL          +  + +  +   Q   L D
Sbjct: 505 QNLK-----RGVIGVRLATERGDLWVFGTHL----------DDPTEAGQVRMTQVTELID 549

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           +         P ++ GD N + +      +  + +     +    +        +++ R 
Sbjct: 550 FW----GGRTPALLLGDLNAEPDS-----EVLQALAEAGFVDL-GEVLGPEAWTSEDHR- 598

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              IDY +                      DI+    R SDH P+     
Sbjct: 599 --RIDYILATTGIELR--------------DIEILDSRASDHRPVVARLT 632


>gi|308095136|ref|ZP_07663177.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           Peru-466]
 gi|308089221|gb|EFO38916.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           Peru-466]
          Length = 434

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 88/291 (30%), Gaps = 36/291 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++L+++NI  L                   Y L+  Y K    D++  QE+ +    A
Sbjct: 168 QNLKLMTYNIWALPAIASHIGD---------RYELIPDYVKGY--DVLAFQEVFASGRDA 216

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +        + +     +         I   I  R   V   Q  +P     D F+   
Sbjct: 217 FLRELAKEYPYQTKMLDKDGFNVYDGGVI---IVSRYPIVNEAQYVFPDCSGTDCFADK- 272

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +   G+   V   H  SF    + E           QQ + +   +     +
Sbjct: 273 --GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSLN--IPN 323

Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251
               V +GDFN   + + G+       +   +    +     S  +   N          
Sbjct: 324 NETVVYSGDFNVNKLKFPGDYQQMIANLSAMEPQ--YSGYTASTFDPRINNFAGEALSGG 381

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N   +DY ++          ++  ++  +  +   +   LSDH P+S   
Sbjct: 382 ENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVI 432


>gi|288920362|ref|ZP_06414673.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
 gi|288348239|gb|EFC82505.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
          Length = 484

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 89/298 (29%), Gaps = 26/298 (8%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +   +  + + +WN+            +   +        +R      D D+  L E+ 
Sbjct: 36  PSQGSSTLLDVGNWNVEWFGATGYGPTNEALQQ------QNVRDVMAGADMDVWGLSEVV 89

Query: 76  SYNAVAKVF-PKNTWCIFYSTERL----INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           S +A   +      +    + + +      +    SN +   A+  R     ++     L
Sbjct: 90  STSAFNTLVAGMPGYTGVVANDPIVTNGAQYYSDFSNTEQKVALVWRSSIATLVSAKVIL 149

Query: 131 LGAKDSF-SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                +F  R      +    +   + +  + +H K+             + +L +  +Q
Sbjct: 150 TSQNSNFAGRPPVEFTLRGTFDGVTRDLVFIVLHAKAGS--------TQDAWNLRNPASQ 201

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYL---GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            LK ++           + GD+N  ++     GN   +   ++         +   S   
Sbjct: 202 ALKAYLDTTYP-TQNVFVIGDWNDDVDTSITSGNASPYANFVNDTARYTFPTR-ALSLAG 259

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     ID+ +         +  S       +  + +     SDH P+   YD+
Sbjct: 260 VASTASYSDFIDHQLTTNEVQAKYVTGSAKAFQ-PQAYVSNYATTTSDHYPVLARYDY 316


>gi|310823161|ref|YP_003955519.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1]
 gi|309396233|gb|ADO73692.1| Exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1]
          Length = 257

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 85/303 (28%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N                   +    L  + K    D++ LQE+   +A    
Sbjct: 1   MKIASWNVN----------------SVRARQERLLNWLKAHQPDVLCLQELKCVDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +         +  +A+  K          +LG  D    +  R
Sbjct: 41  ------DFPTEAVREAGYHAVTHGQKTYNGVAILSKAEPSDV----VLGLSDGVEDSHAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + V+  ++ +   +DS    Y             L+ ++  +     
Sbjct: 91  LIAATV-----SGVRVVSAYVPNGQAVDSPAYVYKLEWYSR------LRRYLEARHTPDQ 139

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD+N     +   D               D  + +        F K         
Sbjct: 140 PLVLCGDWNVAPEPIDVYDPAVWEGQTLFTLKERDALQQVCAFGLADTFRKLHPGVEKKF 199

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+        + L++          D  + +GK+ SDH P+ 
Sbjct: 200 SWWDYRGLSFPKNLGVRIDHIFATAPLVQRLVKAEI-------DREERKGKQPSDHAPVW 252

Query: 300 IDY 302
            ++
Sbjct: 253 AEF 255


>gi|50121263|ref|YP_050430.1| exonuclease III [Pectobacterium atrosepticum SCRI1043]
 gi|49611789|emb|CAG75238.1| exodeoxyribonuclease III [Pectobacterium atrosepticum SCRI1043]
          Length = 268

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 83/310 (26%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE   ++ +  +
Sbjct: 1   MKVVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDDMFPL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +           +         H  +A+  K   +  +       +D+      R
Sbjct: 45  EDVSKY----------GYHVYYHGQKGHYGVALLCKEKPLEVRLGFPTDEEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +          + V++       F       +       ++  Q L+ ++ Q   +  
Sbjct: 90  RIIMADFATEHGTLTVVN-----GYFPQGENRDHPVKFPAKTRFYQDLQTYLEQHHSATQ 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                          L    ++   +     +  F     
Sbjct: 145 PLIVMGDVNISATDLDIGIGEESRKRWLRTGKCSFLPEEREWMARLQGWGLIDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  +           D      ++ S
Sbjct: 205 EGNDRFSWFDYRSSGFDDNRGLRIDLILASTFLAERCVATGI-------DYDIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH PI  ++ 
Sbjct: 258 DHAPIWAEFT 267


>gi|307720642|ref|YP_003891782.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas autotrophica DSM
           16294]
 gi|306978735|gb|ADN08770.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas autotrophica DSM
           16294]
          Length = 338

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 92/336 (27%), Gaps = 77/336 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLW----------KNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           + +++ ++N+  L + +                 +          + +  K+++ DI+ L
Sbjct: 18  KTLKIATYNVENLFDLQRNGHEYKEYIPYTKSNWNDTNYKVKLKNIAKVIKDMNPDIIGL 77

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ S  A+  +         Y       + K  +       +A+  K   V      + 
Sbjct: 78  QEIESLQALKDLRYALKRESIYYQ-----YYKIANLKRTTVKVAILSKIPFVYTHEIAVT 132

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +         R  +E   +IN + ++VL  H KS    +S+    +       Q+    
Sbjct: 133 SS------YRYRNILEAKFKINNEDLYVLVNHWKSKAGPESMRIVSAKKLKKRMQEL--- 183

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNN--------------------------DDFW 225
                    +    +  GD N                                   D   
Sbjct: 184 --------GAKKNIIALGDLNSDYEEYKIFKRKRKHNDTDGITGINHILGTINYQQDAKH 235

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----LIQESFSEI--- 278
             ID ++    +     ++  +      K  +D  ++               S S     
Sbjct: 236 TKIDSDELYNLWYDTDSAKRYSYIYRGKKEAMDNILISAALLDKKGLDYKLHSISVYEKP 295

Query: 279 ------------LYNEDDIKSRGKRLSDHCPISIDY 302
                              + +GK  SDH P+  ++
Sbjct: 296 YLFKGKSIFRWQTTRSRLRRHKGKGYSDHLPVIAEF 331


>gi|325497093|gb|EGC94952.1| exonuclease III [Escherichia fergusonii ECD227]
          Length = 329

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 85/318 (26%), Gaps = 73/318 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +  +A  ++ VS+NIN L                 +    L    +    D++ LQE 
Sbjct: 53  SLSELMAATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE- 95

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   +FP             + ++        H  +A+  K   +  +        
Sbjct: 96  --TKVHDDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GF 141

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   RR +   +      + V++       F       +       +Q  Q L+++
Sbjct: 142 PGDGEEAQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNY 196

Query: 195 ITQKKESLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDS 233
           +  + +   P +I GD N                          L    ++ + +     
Sbjct: 197 LETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGL 256

Query: 234 LIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
           +  F        +       +           ID  +  Q   +  ++          D 
Sbjct: 257 VDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DY 309

Query: 285 IKSRGKRLSDHCPISIDY 302
                ++ SDH P+   +
Sbjct: 310 EIRSMEKPSDHAPVWATF 327


>gi|312882993|ref|ZP_07742724.1| putative phospholipase C [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369153|gb|EFP96674.1| putative phospholipase C [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 441

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 89/294 (30%), Gaps = 38/294 (12%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
                  ++++++NI  L       + K+   R       ++ Y      D++ LQE+ +
Sbjct: 171 VEPDENALKVMTYNIWALP-----VIAKHIGDRYQEIPKHVKGY------DVLALQEVFA 219

Query: 77  Y---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                 + ++  +  +      ++  N        D    I  R   V   Q  +P    
Sbjct: 220 AGRGEFLRELAKEYPYQTQMLDKKGPNIY------DGGVTIVSRYPIVNQTQFVFPDCTG 273

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            D F+           +   G    V   H  S+    + E           +Q + L  
Sbjct: 274 TDCFADK---GVNYAEIIKGGVAYHVFATHTASYDTSTAREYRQRQ-----FKQMRQLAS 325

Query: 194 WITQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDS-LIRFPKEKDSRCNANK-- 249
            +          +  GDFN     + G+       +   +     + +        N   
Sbjct: 326 TLN--IPKNEAVIYGGDFNVNKRKFPGDYQQMLSNLSAIEPSYSGYTESTFDPRVNNFAG 383

Query: 250 ----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               +  N   +DY ++          ++  ++  +  +   +   LSDH P+S
Sbjct: 384 KIREDNGNVEYLDYVMVSNEYLNKSHSDNRVDVPRSTSEGLWKHFNLSDHFPVS 437


>gi|254513404|ref|ZP_05125469.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11]
 gi|221532408|gb|EEE35404.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11]
          Length = 2116

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 82/316 (25%), Gaps = 43/316 (13%)

Query: 18   ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            A    ++ + ++N+  ++  E         +        L         DI+ LQE+   
Sbjct: 1637 AGSKTELTVATYNVLNVTSNEADGDADQIAQLAQQIVNNLGS------PDILALQEIQDN 1690

Query: 78   NAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            + V                          +    +       +      +I  A    ++
Sbjct: 1691 SGVTNDGTLDADETLQAIVDAIAAAGGPVYSFQSAVVDEDGENGGVPGGNIRNAFLYNEE 1750

Query: 120  NVR------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL--- 170
             V       +       +G  +  +  G+R  +  +   NG++I +++ H  S       
Sbjct: 1751 RVEANSFLTLESNVLTDMGVTNPDTFEGSRDPLLGVFTFNGQEITLINNHFSSRFGSEPV 1810

Query: 171  -DSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                +            QA  + + +      +      + GD N         +D    
Sbjct: 1811 FGGPQPFNQGGEDEREAQALTINEVVDGLLANDPDANIAVLGDLNTFDFTDELTEDLPGV 1870

Query: 228  IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             D           +     +     N   +D+  +  +  +    +     +        
Sbjct: 1871 GDEQVLTNLIELAEGDEAYSFNFQGNSQALDHIFVTDSLLEGANVDFVHVNV-------D 1923

Query: 288  RGKRLSDHCPISIDYD 303
                 SDH PI   + 
Sbjct: 1924 FADSASDHEPIVASFT 1939


>gi|332992625|gb|AEF02680.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas sp.
            SN2]
          Length = 1340

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 83/316 (26%), Gaps = 38/316 (12%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFLQEMGSYN 78
               V++ S+N+    +       + +            +      +DAD+V L E+ +  
Sbjct: 966  TGDVKVASFNVLNYFDGPDFPTSRGATNEFELVRQEAKIVAALAAMDADVVGLVEVENDG 1025

Query: 79   AVAKVFPKNTWCIFYSTERLINHSKRDSN-----NDIHTAIAVRKKNVRVLQQSYPLLGA 133
                           +      +S    +     ++I   +  +   V     +     +
Sbjct: 1026 HGEDSAIATLTAAVNAEMGGDVYSYVSISEALGTDEIAVGMIYKPAVVTPFGNAVTSSES 1085

Query: 134  KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP-------SCSLLSQ 186
               +            V  NG+   +   H KS     S     +          +L + 
Sbjct: 1086 PFDYGNRQP-LLQSFTVNANGEAFTLAVNHFKSKGSCSSATGDNADSGDGQGCWNALRTD 1144

Query: 187  QAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             A  L   +    ++     +I GD N               ++                
Sbjct: 1145 AANGLVAIVENNSDTLSDRLLIMGDLNAYAAEEPIL-----ALESAGYTNLVNTFGGDSA 1199

Query: 246  NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------------- 289
             +         +D+ +   +  ++++  +   I  +E  +                    
Sbjct: 1200 YSYTFGGELGYLDHALSSPSLTEYVVDATVWHINADEPRVFDYNEEYKTDAQITDYYGAD 1259

Query: 290  -KRLSDHCPISIDYDF 304
              R SDH P+ +  +F
Sbjct: 1260 AYRSSDHDPVLVVLNF 1275


>gi|329119607|ref|ZP_08248288.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464204|gb|EGF10508.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200]
          Length = 276

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 86/308 (27%), Gaps = 73/308 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  Q +++ +WN+N+L+                     ++ +      DI+ LQE     
Sbjct: 9   TAPQTMKIATWNVNSLN----------------VRLPQVQNWLAEHQPDILALQE----- 47

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                   +      +   ++      S    +  +A+   +     ++        +  
Sbjct: 48  -----LKLDQDKFPAAALAMMGWQCAWSGQKTYNGVAIVSLHPLHDVRT-----GLPALP 97

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               RR +   +      + V++++  +    DS +  Y        Q    L +++  +
Sbjct: 98  DDPQRRVIAATI----GGVRVINVYCVNGEAPDSPKFQYKK------QWFAALTEFVRGE 147

Query: 199 KESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDS 243
                  V+ GDFN         D                +++T+          +    
Sbjct: 148 LARHDKLVLLGDFNIAPADADCYDPEKWRGKILCTDQERGWFQTLLGLGLTDSLRRIHPE 207

Query: 244 RCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           ID+ +        L   +        D      +R SD
Sbjct: 208 GAF-YTWFDYRGAMFQRGLGLRIDHLLTTPALAAALQNAAV-------DLDARAQERPSD 259

Query: 295 HCPISIDY 302
           H P+  ++
Sbjct: 260 HAPVWAEF 267


>gi|115378940|ref|ZP_01466074.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
 gi|310821513|ref|YP_003953871.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|115364057|gb|EAU63158.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394585|gb|ADO72044.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 319

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 94/296 (31%), Gaps = 19/296 (6%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +   +   A  V +  WN+                +        +R      + DI  L+
Sbjct: 39  VTIPSQGSATTVDIGCWNVEWFGSSSNGPTNDTLQQ------QNVRDVLLGSNLDIWGLE 92

Query: 73  EMGSYNAVAKVFPKNTWCIFY--STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+ S  A + +  + +       S   + + S   S+++    I  +     V      +
Sbjct: 93  EVVSTTAFSNLKAQLSGYAGLLASDASVTSGSSFYSSSEQKVGILYKTSVASVQSARI-I 151

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L A DS         V++ V +NG    ++ I   +  F D+       S       +  
Sbjct: 152 LTANDSDFAGRPPLEVKMRVTLNGTARDIVVIVFHAKAFDDAT------SWQRRLNASNA 205

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYL--GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           LK ++     S  P V+ GD+N  ++          ++    +     FP +  S     
Sbjct: 206 LKAYLDSTYPST-PVVVLGDWNDDVDTSITSGKASPYQNFVSDAQDYFFPTKALSDAKVA 264

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   ID+ ++        +  S      +   I S     +DH P+   Y +
Sbjct: 265 STASYPDMIDHQLVTNELKSLYVAGSAKVYRVDT-YISSYATTTTDHFPVLTRYAW 319


>gi|113866485|ref|YP_724974.1| metal-dependent hydrolase [Ralstonia eutropha H16]
 gi|113525261|emb|CAJ91606.1| Metal-dependent hydrolase [Ralstonia eutropha H16]
          Length = 260

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 98/286 (34%), Gaps = 51/286 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78
           K+R+V++NI+             +          +R     +DADIVFLQE+   N    
Sbjct: 2   KLRVVTYNIH----------KGVTGISRRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLV 51

Query: 79  AVAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           A A   P++T   + +        + +    +  H   A+  ++  ++ ++  +     S
Sbjct: 52  AAALFDPEHTQLNYLATDAYPHSVYGRNAVYDYGHHGNAILSRHPILMSENLDI-----S 106

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R   R  +  + +++G +  ++ +H   F                  +QA+ L + + 
Sbjct: 107 DHRFEQRGLLHAVADVHGVETHLICVHFGLF-------------ARSRVRQAEALVERVR 153

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               + +P VIAGDFN   +           I      +     + +R +   +      
Sbjct: 154 TVVPAGMPLVIAGDFNDWNHR------LDAQICNTLGAVEASHARGARLHTFPSHMPWWQ 207

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +              EI            + SDH P+  + 
Sbjct: 208 LDRIYVRG-----------YEIERAHALTGRDWAQRSDHVPLVAEL 242


>gi|297564320|ref|YP_003683293.1| Endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296848769|gb|ADH70787.1| Endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 634

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 91/291 (31%), Gaps = 48/291 (16%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             P  AS  + +R+ ++N+      +G                      + LDAD+V L 
Sbjct: 389 FAPAPASGTEGLRVAAYNVRMGFGMDGRFSVTEQ-----------AGALRRLDADVVVLS 437

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+     +       +             +     +      AV        ++ +PL  
Sbjct: 438 EVDRGWLLNGGNDVLSRLALELGMA----AHWGPADGPLWGDAVLTSLPVTRERRHPLTP 493

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +  + ++     A+E+ V+  G  + V+  H++                    +Q + + 
Sbjct: 494 SGPTGAQ-----ALEVTVDHGGTGVTVVSTHVQP--------ADRGFRAESSRRQLREIA 540

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +   + +E   P V+AGD N + +     D  W  +  +  L  F   +       +   
Sbjct: 541 EIARRARERGTPVVVAGDLNIEPD-----DPAWGLLTEHGLLDAFRNTRPFPTLPGET-G 594

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +   ID+ +   +                  D  +     SDH P+++   
Sbjct: 595 SDQQIDHVLHTGDLAPS--------------DPANPDVPHSDHRPVAVTLT 631


>gi|326918342|ref|XP_003205448.1| PREDICTED: nocturnin-like [Meleagris gallopavo]
          Length = 379

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 88/293 (30%), Gaps = 22/293 (7%)

Query: 23  KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78
            +R++ WNI    L E ++          +      L+ +       DI+ LQE+  Y +
Sbjct: 90  PIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYKPDILCLQEVDHYFD 149

Query: 79  AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +  +  +   +  +          +N     A+   K+   ++  +   L A    
Sbjct: 150 TFEPLLSRLGYQCTFFPKPWSPCLDVEQNNGPDGCALFFLKERFELINSANIRLTAMKLK 209

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           +      A  L     G+   +   HLK+           +      S Q   L   +  
Sbjct: 210 TN-QVAIAQTLKCSETGRLFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLKS 258

Query: 198 K-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
             + + +P +I GDFN +       +    +++ N +      +  S             
Sbjct: 259 ITQGAKIPLIICGDFNAEPTEEVYREFSNSSLNLNSAYKLLSPDGQSEPPYTTWKIRPSG 318

Query: 256 ----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +DY    Q+A                 +        SDH  +  D+ F
Sbjct: 319 ECRHTLDYIWYSQHALNVNSALGLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 371


>gi|224177590|gb|ACN38810.1| MIP06315p [Drosophila melanogaster]
          Length = 441

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%)

Query: 16  CTAS-VAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           C+A      +RL+ WNI   TL    +G                L+ Q       D++ L
Sbjct: 101 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 160

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+  +  +  V     +   +  +          +N     AI  ++  +++      +
Sbjct: 161 QEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRI 220

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L      S      A  L +  +G++  V   HLK+           +    L ++Q + 
Sbjct: 221 LEVWRVQSN-QVAIAARLRMRSSGREFCVATTHLKARHG--------ALLAKLRNEQGRD 271

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKTIDPND 232
           L  ++ Q      P ++ GDFN +                    Y     D  + + PN 
Sbjct: 272 LIRFVKQFAG-DTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNA 330

Query: 233 SLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  F  +   R       + +        IDY     +  K      F        +  
Sbjct: 331 DVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRT 390

Query: 287 SRGKRLSDHCPISIDYD 303
              +  SDH  +  D++
Sbjct: 391 PSFQYPSDHFSLVCDFE 407


>gi|161078191|ref|NP_001097746.1| curled, isoform D [Drosophila melanogaster]
 gi|158030219|gb|ABW08640.1| curled, isoform D [Drosophila melanogaster]
          Length = 642

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%)

Query: 16  CTAS-VAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           C+A      +RL+ WNI   TL    +G                L+ Q       D++ L
Sbjct: 302 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 361

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+  +  +  V     +   +  +          +N     AI  ++  +++      +
Sbjct: 362 QEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRI 421

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L      S      A  L +  +G++  V   HLK+           +    L ++Q + 
Sbjct: 422 LEVWRVQSN-QVAIAARLRMRSSGREFCVATTHLKARHG--------ALLAKLRNEQGRD 472

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKTIDPND 232
           L  ++ Q      P ++ GDFN +                    Y     D  + + PN 
Sbjct: 473 LIRFVKQFAG-DTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNA 531

Query: 233 SLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  F  +   R       + +        IDY     +  K      F        +  
Sbjct: 532 DVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRT 591

Query: 287 SRGKRLSDHCPISIDYD 303
              +  SDH  +  D++
Sbjct: 592 PSFQYPSDHFSLVCDFE 608


>gi|161078189|ref|NP_001097745.1| curled, isoform C [Drosophila melanogaster]
 gi|21654879|gb|AAK85704.1| nocturin [Drosophila melanogaster]
 gi|158030218|gb|ABW08639.1| curled, isoform C [Drosophila melanogaster]
          Length = 449

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%)

Query: 16  CTAS-VAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           C+A      +RL+ WNI   TL    +G                L+ Q       D++ L
Sbjct: 109 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 168

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+  +  +  V     +   +  +          +N     AI  ++  +++      +
Sbjct: 169 QEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRI 228

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L      S      A  L +  +G++  V   HLK+           +    L ++Q + 
Sbjct: 229 LEVWRVQSN-QVAIAARLRMRSSGREFCVATTHLKARHG--------ALLAKLRNEQGRD 279

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKTIDPND 232
           L  ++ Q      P ++ GDFN +                    Y     D  + + PN 
Sbjct: 280 LIRFVKQFAG-DTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNA 338

Query: 233 SLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  F  +   R       + +        IDY     +  K      F        +  
Sbjct: 339 DVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRT 398

Query: 287 SRGKRLSDHCPISIDYD 303
              +  SDH  +  D++
Sbjct: 399 PSFQYPSDHFSLVCDFE 415


>gi|161078193|ref|NP_001097747.1| curled, isoform E [Drosophila melanogaster]
 gi|73853348|gb|AAZ86746.1| RE65127p [Drosophila melanogaster]
 gi|108383940|gb|ABF85759.1| IP15605p [Drosophila melanogaster]
 gi|158030220|gb|ABW08641.1| curled, isoform E [Drosophila melanogaster]
          Length = 446

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%)

Query: 16  CTAS-VAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           C+A      +RL+ WNI   TL    +G                L+ Q       D++ L
Sbjct: 106 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 165

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+  +  +  V     +   +  +          +N     AI  ++  +++      +
Sbjct: 166 QEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRI 225

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L      S      A  L +  +G++  V   HLK+           +    L ++Q + 
Sbjct: 226 LEVWRVQSN-QVAIAARLRMRSSGREFCVATTHLKARHG--------ALLAKLRNEQGRD 276

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKTIDPND 232
           L  ++ Q      P ++ GDFN +                    Y     D  + + PN 
Sbjct: 277 LIRFVKQFAG-DTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNA 335

Query: 233 SLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  F  +   R       + +        IDY     +  K      F        +  
Sbjct: 336 DVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRT 395

Query: 287 SRGKRLSDHCPISIDYD 303
              +  SDH  +  D++
Sbjct: 396 PSFQYPSDHFSLVCDFE 412


>gi|148271974|ref|YP_001221535.1| putative extracellular nuclease/phosphatase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147829904|emb|CAN00829.1| putative extracellular nuclease/phosphatase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 711

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 85/312 (27%), Gaps = 33/312 (10%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +  V   VR+  +N+       G      + +        +      LDA +V L E+
Sbjct: 310 ASSPEVGGDVRIAGFNVLNYFTTLGERGA-ATAEELRKQRAKIVTAITGLDAQVVTLMEI 368

Query: 75  GS-----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            +              + +          +   R     +    ++I  AI  R   V  
Sbjct: 369 ENSTRFGEPADTATADLVRGLNDAAGKPVWDYVRTPAELQSTPTDEIQNAIIYRTDAVTP 428

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           + Q+   +   D       R  V        +   V+  HLKS     +         + 
Sbjct: 429 VGQAATQI---DETVWGNAREPVAQSFRGGDRTFTVVANHLKSKSGSGTQPADGQGFFNA 485

Query: 184 -LSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
               QA+ +  +  + + S       + GDFN             + +     +     +
Sbjct: 486 DRVAQAKAVARFAGELEASSGSDLVYLLGDFNAYSEEDPI-----QVLRDAGFVDLVAAK 540

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------KR 291
                           +D+ +  +     +      +I   E   +  G          R
Sbjct: 541 A-PGERTYSFDGEVGSLDHVLATRAGAAAVTGVGVWDINAPEWAAREYGGAATDGSSAFR 599

Query: 292 LSDHCPISIDYD 303
            SDH P+ +  D
Sbjct: 600 SSDHDPVKVGLD 611


>gi|19421839|gb|AAL87740.1|AF320511_1 sphingomyelinase-like protein 1 [Leptospira interrogans]
          Length = 648

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 95/293 (32%), Gaps = 25/293 (8%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++S N+  L     +  W N      +       Y K  + D++  +E    +A   
Sbjct: 179 EIKVLSHNVFMLPTN--LPRWGNWGHDERAKRISKSDYVK--NQDVIVFEEAFDTSARKI 234

Query: 83  VFPKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T            +     S + ++  + +  K     +  Y    + 
Sbjct: 235 LLDNLREEYPYQTDVVGRTKKNWDASLGNFRSYSLVNGGVVILSKWPIEEKIQYIFNDSG 294

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  N+  V + +   GKK  V+  H +S       +N  +      + Q   ++++
Sbjct: 295 CGADWFANKGFVYVKINKEGKKFHVIGTHAQS-----QDQNCSNLGVPNRANQFDDIRNF 349

Query: 195 I-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANK 249
           I ++        +I GD N         D   +        +  P   D++ N       
Sbjct: 350 IYSKNIPKDETVLIVGDLNVIKESNEYYDMISRLNVNEPRYVGVPFTWDAKTNEIAAYYY 409

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPIS 299
                + +DY  + ++  +  + ++ +    ++      G      SDH PI 
Sbjct: 410 ENEEPVYLDYIFVSKSHAQPPVWQNLAYDPVSKHTWTVSGYTSDEFSDHYPIY 462


>gi|150017193|ref|YP_001309447.1| endonuclease/exonuclease/phosphatase [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903658|gb|ABR34491.1| Endonuclease/exonuclease/phosphatase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 254

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 84/284 (29%), Gaps = 38/284 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++++N+          +  +   R  +  +L+         DI+ +QE+         
Sbjct: 1   MRVMTFNLR-------RDVPIDFNDRWNARRSLIYNVINEYKCDIIGVQEIKDNMLNDIK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                + I  +       S+R+S         + +          P       +     R
Sbjct: 54  ENIEVYNIIGAPRGKKVSSERNSLLLSRN--YLIEDYKTFWLSETPDKIGSRVWYSYLPR 111

Query: 144 RAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                +++  NG+++ V + HL +      +                 LK  +   ++  
Sbjct: 112 ICTTAILQMDNGRRVRVCNTHLDNLLPKARMYG---------------LKKILEFIEDEK 156

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANKNLRNKIPID 258
           +P ++ GDFN + N           I     L           +S     K     + ID
Sbjct: 157 LPVILMGDFNDRPNSKLIKSLKEGKISSKKLLPVQDVNMGLYNESTIGNFKRSGKGLHID 216

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y  + +             +          GK  SDH P+  D 
Sbjct: 217 YIFVSEE---------IDVVNAEIIKYNVNGKYPSDHYPLMADI 251


>gi|332885531|gb|EGK05780.1| hypothetical protein HMPREF9456_02582 [Dysgonomonas mossii DSM
           22836]
          Length = 284

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 91/311 (29%), Gaps = 37/311 (11%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M + +    V  L+    S    + ++S+NI   +  + ++ W            +  + 
Sbjct: 1   MKKLFYFLAVIVLLASCNSKPIDLNVMSFNIRYDNPDDSLNNW-------QYRKDVAAKT 53

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            K+ +ADIV  QE+              +                S            K+
Sbjct: 54  IKSQNADIVGTQEVLVNQLNDLKSRLPEYNAIGVGREDGIEKGEYSAILYKKDRFKEIKS 113

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178
                   P +     +  A  R A   ++E   + K+++ ++ HL         +    
Sbjct: 114 GYFWLSETPEVAGSKGWDGACERIATWAILEDISSKKQLFFINTHL-----DHVGKIARQ 168

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSL 234
              +LL  +A  L         + +P ++ GDFN                 + +  +  +
Sbjct: 169 EGVTLLLSRANALA--------NGLPIIMTGDFNATPESDVIKHVTDVNSPEHLIHSKDI 220

Query: 235 IRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                  D   +      +  +  IDY  + +               ++    K     +
Sbjct: 221 AVEKSGTDWTFHGFGKVPMERREFIDYVFVSK---------GIKVAKHSVLPEKLDDIFI 271

Query: 293 SDHCPISIDYD 303
           SDH  +    +
Sbjct: 272 SDHSVVVAQIE 282


>gi|297200389|ref|ZP_06917786.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
 gi|197709508|gb|EDY53542.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
          Length = 275

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 77/295 (26%), Gaps = 44/295 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAV 80
           +R+V+WN+                    +    +    + L  D+V LQE+    S N  
Sbjct: 4   MRVVTWNLWWRFGP------------WEARQKAILAALRELRPDVVGLQEVWSAGSENLA 51

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +  +      ++        +R   +       AV  +   + +    L   +D    
Sbjct: 52  EWLAGELGLHWAWAASPASERWQRRIGDPGVEVGNAVLSRWPVIDRAVLRLPAPEDLDD- 110

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R A    +      I     HL S             + ++  QQ   L +++   +
Sbjct: 111 --GRLAFHTRLAGPSYDIPFFTTHLTSAPT----------ASAIRCQQVTALAEFVATHR 158

Query: 200 ESLV-PFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSL--IRFPKEKDSRCNA 247
                P VI GDFN   +                  +             P       N 
Sbjct: 159 SGTDFPPVITGDFNAWPDSDEIRLFGGYKTAPAAPGQLFLDAWEYANPTAPSATWDPANP 218

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +     IDY  +                +    D    G   SDH  +  D 
Sbjct: 219 YVRMSPPARIDYIHVG---LAGPAGLGHVLKVRRAGDGPVDGVWPSDHLAVVADL 270


>gi|37526441|ref|NP_929785.1| exonuclease III [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36785872|emb|CAE14923.1| Exodeoxyribonuclease III (exonuclease III) (EXO III) (AP
           endonuclease VI) [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 268

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 79/313 (25%), Gaps = 79/313 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDEAFPL 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   K  + +FY                 H  +A+  + V +                  
Sbjct: 45  EEVGKLGYHVFYY------------GQKAHYGVALLTRQVPLAVYR-----GFPGDDEEA 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            RR +   VE     + V++       F       +        +  Q L++++ Q    
Sbjct: 88  QRRVIMAEVETPHGLLTVIN-----GYFPQGENREHPVKFPAKEKFYQDLQNYLEQNLTP 142

Query: 202 LVPFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPK 239
               +I GD N                               D   + +     +  F  
Sbjct: 143 QSHVIIMGDMNISPTDLDIGIGENNQKRWLKTGKCSFLPEERDWMDR-LKNWGLVDTFRH 201

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  +      I           D      +
Sbjct: 202 LNPECNDQFSWFDYRSKGFDDNRGLRIDLLLASKPLMDRCIATGI-------DYKIREME 254

Query: 291 RLSDHCPISIDYD 303
           + SDH P+  +++
Sbjct: 255 KPSDHAPVWAEFE 267


>gi|91227580|ref|ZP_01261884.1| putative phospholipase C precursor [Vibrio alginolyticus 12G01]
 gi|91188473|gb|EAS74766.1| putative phospholipase C precursor [Vibrio alginolyticus 12G01]
          Length = 442

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 93/294 (31%), Gaps = 42/294 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78
           Q ++L+++NI  L+                  Y L+ Q+ K    D++ LQE+ +     
Sbjct: 176 QNLKLMTYNIWALTAIASHIGD---------RYELIPQHVKGY--DVLALQEVFASGREA 224

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + ++  +  +      +         + +D    I  R   V   Q  +P     D F+
Sbjct: 225 FLRELAKEYPYQTKMLDKE------GVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFA 278

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                      +   G+   V   H  SF    + E           +Q + L   +   
Sbjct: 279 DK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FKQIRTLAQSLD-- 328

Query: 199 KESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251
             S    V +GDFN     + G+       +   +    +    +S  +   N       
Sbjct: 329 IPSSETVVYSGDFNVNKRKFPGDYQQMIANLSAIEPH--YSGYTESTFDPRINNFAGEAL 386

Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N   +DY ++          ++  ++     +   +   LSDH P+S   
Sbjct: 387 SGGENVEYLDYVMVSSEYGVKSFNDNRVDVPRTTAESLWKHYNLSDHFPVSATI 440


>gi|145299881|ref|YP_001142722.1| exodeoxyribonuclease III [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142852653|gb|ABO90974.1| exodeoxyribonuclease III [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 268

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 78/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKIISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   V  Q       +D+      R
Sbjct: 42  -------FPLADVEAMGYHVEFHGQKAHYGVAIMSKQKPVEVQKGFPTDPEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +    +     +    I + +  F       +        +  + L+ ++        
Sbjct: 90  RMIMATFKREDGSL----IKVMNGYFPQGENQDHETKFPAKQKFYENLQHYLETHHTPND 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                          L    ++ + +        F     
Sbjct: 146 QLVLIGDVNISPTDLDIGIGEANRKRWLREGKCSFLPIEREWMERLKGFGLTDTFRAANP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           + C        +           ID  +              +      D      ++ S
Sbjct: 206 TECERFSWFDYRSKGFDENRGLRIDLIMASDALKD-------TVTETGIDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWATF 267


>gi|157412901|ref|YP_001483767.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9215]
 gi|157387476|gb|ABV50181.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9215]
          Length = 281

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 91/301 (30%), Gaps = 63/301 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   +  + +  +   ++ DI+ LQE      +   FP
Sbjct: 3   IATWNVN----------------SIRTRLSQIIDWINQVNPDILCLQE---TKVMDDSFP 43

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
              +         + ++        +  +A+  K      +     G  +        + 
Sbjct: 44  TEPF-------EKLGYAVEVYGQKSYNGVAIISKTKPENVKKG-FYGCTNFNQNIEIFQD 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + L+  +   I ++++++ +   L+S +  Y             L  ++ ++++     
Sbjct: 96  QKRLISADINNIKIINVYVPNGSSLESSKFKYK------INWLNCLASFLDEQEKKGELI 149

Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPND-------SLIRFPKEKDSRCNANKNL 251
            + GDFN   + L  +D            I+ N         LI   +  +         
Sbjct: 150 CLLGDFNVAPSNLDIHDPKKYEGGIMASEIERNALNNVLKKRLIDSFRIFEQNTGHWSWW 209

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+  + +     L            D       R SDH P+ ID 
Sbjct: 210 DYRNNAFELNKGWRIDHIYISKELSSKLKSCVI-------DCSPRGYLRPSDHAPVMIDL 262

Query: 303 D 303
           +
Sbjct: 263 N 263


>gi|182417077|ref|ZP_02948455.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum 5521]
 gi|237667663|ref|ZP_04527647.1| endonuclease/exonuclease/phosphatase [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182379086|gb|EDT76590.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum 5521]
 gi|237656011|gb|EEP53567.1| endonuclease/exonuclease/phosphatase [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 258

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 87/291 (29%), Gaps = 46/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+      +          R  +   +          DI+  QE          
Sbjct: 1   MKVMTFNLRCDFPLD-------INNRWKNRRHITYNIIDKYKCDIIGTQEATENMYKDIK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-----FS 138
              + + I  +                   I ++ +N  +  +++ L    D+     + 
Sbjct: 54  KNSDNYNIIGTPRSRK-------FFVERNDILIKNENKIIESKTFWLSDTPDTVGSSKWF 106

Query: 139 RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
               R     ++E++ K KI V + HL  F                   + + L + I +
Sbjct: 107 SVFPRICTTAVIELSNKVKIRVCNSHLDCFTS------------KAREYELKRLMELIEE 154

Query: 198 -KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA----NKNLR 252
            + +  +P +I GDFN   +     +                 +K    N+     K   
Sbjct: 155 EQIKEDLPIIIMGDFNSGPDSKLIKNLSSGVYGSKKVSAVQEYDKRLYMNSTMSMFKGKE 214

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + IDY  + +          F             GK  SDH P+  + +
Sbjct: 215 KGLHIDYIFVSEE---------FKVNNVEIVRYNENGKYPSDHYPLMAEIE 256


>gi|255014700|ref|ZP_05286826.1| hypothetical protein B2_12389 [Bacteroides sp. 2_1_7]
          Length = 279

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 90/305 (29%), Gaps = 37/305 (12%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           ++AL         +  +K+ ++S+NI   +  +  + W     +   D+       K  +
Sbjct: 1   MVALFATGCLFAKNNDEKMNVMSYNIRYDNLGDKDNQW-----KFRRDFA--ADLVKFYE 53

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           AD+   QE+ +      +     +                +            K+     
Sbjct: 54  ADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSVDKSGNFWL 113

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                   K  +  A  R A   +++    GKK + L+ HL         +       SL
Sbjct: 114 AEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKVARHEGASL 168

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPK 239
           + +QA+ L           +P ++ GDFN   +             + +  + ++  F  
Sbjct: 169 VLEQAKKL--------SENLPIIVTGDFNAVPSDEPIQVLTNPSDPRHLTHSRTIAGFTY 220

Query: 240 EKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +         +  IDY  +  N            + +            SDHCP
Sbjct: 221 GPKWTFHDFGKIPYDKREWIDYIFVKGN---------IKVLRHGVLTETLNNLFPSDHCP 271

Query: 298 ISIDY 302
           +    
Sbjct: 272 VISTL 276


>gi|269960777|ref|ZP_06175148.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834441|gb|EEZ88529.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 442

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 91/297 (30%), Gaps = 42/297 (14%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76
           +  Q ++L+++NI  L                   Y L+  Y K    D++ LQE+ +  
Sbjct: 173 ADEQNLKLMTYNIWALPAIASHIGD---------RYELIPDYVKGY--DVLALQEVFASG 221

Query: 77  -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               + ++  +  +      +         +  D    I  R   V   Q  +P     D
Sbjct: 222 RDAFLRELAKEYPYQTKMLDKD------GFNIYDGGVIIVSRYPIVNQAQYVFPDCSGTD 275

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            F+           +   G+   V   H  SF    + E           +Q + +   +
Sbjct: 276 CFADK---GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FKQMRTMAQSL 327

Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251
                +    V +GDFN   + + G+       +   +    +     S  +   N    
Sbjct: 328 N--IPTNETVVYSGDFNVNKLKFPGDYQQMIANLSAIEPQ--YSGYTASTFDPRINNFAG 383

Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  N   +DY ++          ++  ++  +      +   LSDH P+S   
Sbjct: 384 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAGSLWKHYNLSDHFPVSAVI 440


>gi|28869934|ref|NP_792553.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28853179|gb|AAO56248.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 270

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 80/312 (25%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  +N  +        G +     +  R
Sbjct: 41  ------QFPLADVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFEGDDEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + NG+ + +++       F       +        +  + L+  +     +  
Sbjct: 91  FIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGHFSNEQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++ + +     +  F     
Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLYP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +        +            D      ++
Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIRAAGV-------DYDLRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++  
Sbjct: 259 PSDHAPIWLELS 270


>gi|145633402|ref|ZP_01789132.1| exodeoxyribonuclease III [Haemophilus influenzae 3655]
 gi|145635225|ref|ZP_01790929.1| exodeoxyribonuclease III [Haemophilus influenzae PittAA]
 gi|229845387|ref|ZP_04465518.1| exonuclease III [Haemophilus influenzae 6P18H1]
 gi|229846960|ref|ZP_04467066.1| exonuclease III [Haemophilus influenzae 7P49H1]
 gi|144985965|gb|EDJ92567.1| exodeoxyribonuclease III [Haemophilus influenzae 3655]
 gi|145267504|gb|EDK07504.1| exodeoxyribonuclease III [Haemophilus influenzae PittAA]
 gi|229810044|gb|EEP45764.1| exonuclease III [Haemophilus influenzae 7P49H1]
 gi|229811695|gb|EEP47393.1| exonuclease III [Haemophilus influenzae 6P18H1]
 gi|309972825|gb|ADO96026.1| Exodeoxyribonuclease III [Haemophilus influenzae R2846]
          Length = 267

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K    + +       +D+  R  
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVVRRGFPTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V++       F       +        +    L+ ++ ++ + 
Sbjct: 91  ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L     +++ +        F K 
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ Q   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|298487202|ref|ZP_07005251.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298158226|gb|EFH99297.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 270

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 82/312 (26%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++    + +         H  +A+  +N  +        G +     +  R
Sbjct: 41  ------QFPHAEVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFEGDDEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + NG+ + +++       F       +        +  + L+  +     +  
Sbjct: 91  FIWGTCADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLESHFSNEQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++ + +     +  F     
Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHLYP 205

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +        +            D      ++
Sbjct: 206 EVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++ +
Sbjct: 259 PSDHAPIWLELN 270


>gi|241758932|ref|ZP_04757044.1| exodeoxyribonuclease III [Neisseria flavescens SK114]
 gi|241320753|gb|EER56986.1| exodeoxyribonuclease III [Neisseria flavescens SK114]
          Length = 256

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 88/303 (29%), Gaps = 71/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++ +  +  ADI+ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRLPQVQNWLADHQADILALQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRHEPQDVH-----CGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++++  +   LDS +  Y        Q    L +++  +  +  
Sbjct: 90  RVIAATIN----GVRVINVYCINGEALDSPKFQYKE------QWFAALTEFVRNEMAAHP 139

Query: 204 PFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNANK 249
             V+ GDFN         D                W     +  L    ++         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDGLRKIHPEGAFYT 199

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ +        L   +        D      +R SDH P+  
Sbjct: 200 WFDYRGAMFQRKLGLRIDHILTSPELAATLTNVTV-------DLETRAQERPSDHAPVIA 252

Query: 301 DYD 303
           ++D
Sbjct: 253 EFD 255


>gi|291302792|ref|YP_003514070.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572012|gb|ADD44977.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 940

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 89/335 (26%), Gaps = 68/335 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            TA   +++ + ++N+  LS ++    +    +   ++             D+V L+E+ 
Sbjct: 485 ATAQTPEQLAVATYNVENLSPKDSGGKFAALAEGIVTNLAA---------PDVVVLEEIQ 535

Query: 76  SYNA------------VAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             N             + K+           +          +        +I  A    
Sbjct: 536 DNNGSTNDAVVDADQTLDKLTAAITAAGGPRYDW-RQISPTDDADGGQPGGNIRVAFLFN 594

Query: 118 KKNVRVLQQSY----------------------PLLGAKDSFSRAGNRRAVELLVEINGK 155
              V  + +                        P      + +   +R+ +      NG+
Sbjct: 595 PDRVSFVDREGGDATTPVTVGTDSDGTPSLNVSPGRIDPANEAWKSSRKPLAGEFRFNGE 654

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQKK--ESLVPFVIAG 209
           K+ V+  H  S     + +  Y P          +QA+ +  ++      ++    V+AG
Sbjct: 655 KVIVVANHFNSKGGDQNADGRYQPPERSTEVQRIKQAKAVNAFVKDTLAVDADANVVVAG 714

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           D N                D            D+             +D+ ++     K 
Sbjct: 715 DINDYQFSP----ALDALTDGEVLEDLITGLPDTEQYTYVYNGISQVLDHILVSPALAKA 770

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                               ++ SDH P     +F
Sbjct: 771 --------DYEVVHINAEFAEQNSDHDPQVARLNF 797


>gi|331014335|gb|EGH94391.1| exonuclease III [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 270

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 81/312 (25%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  +N  +        G +     +  R
Sbjct: 41  ------QFPLADVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFEGDDEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + NG+ + +++       F       +        +  + L+  +  +  +  
Sbjct: 91  FIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGQFSNEQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++ + +     +  F     
Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLYP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +        +            D      ++
Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++  
Sbjct: 259 PSDHAPIWLELS 270


>gi|149175215|ref|ZP_01853837.1| probable secreted protein [Planctomyces maris DSM 8797]
 gi|148845824|gb|EDL60165.1| probable secreted protein [Planctomyces maris DSM 8797]
          Length = 280

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 83/286 (29%), Gaps = 48/286 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            Q +R++ +NI+     +G             D + L +  +    D+V LQE+      
Sbjct: 38  TQTLRVLCYNIHYGQGTDG-----------KYDISRLARVIQETKPDLVALQEVDVGVKR 86

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-R 139
           +    +       +   +                AV  +   +     PL   + +    
Sbjct: 87  SNRVHEAQRLAELTGLAVRF-GPTQHYEGGLFGNAVLTRLPILDVMIQPLPYTESTPQLV 145

Query: 140 AGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              R A+ + V   NGK +  +  H +     D              ++A+ +       
Sbjct: 146 TYPRGAIIVTVRGQNGKPLRFISTHFQHNLPAD------------RIEEAKAINGH--FT 191

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            +S +P ++AGD N             +  +  D              +    + +  ID
Sbjct: 192 LDSDIPTILAGDMNATPEAEPIQILQKQWTNAIDD---------KATPSAPATKPRSRID 242

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Y      A   +I+    +               SDH PI     +
Sbjct: 243 YIFYRPAADFEVIETKVIDESL-----------ASDHRPIFAILKW 277


>gi|188991373|ref|YP_001903383.1| Endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167733133|emb|CAP51331.1| Endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. campestris]
          Length = 315

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 93/289 (32%), Gaps = 36/289 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             ++  +++ LV+ N++   E               +    + +  K L  D++ LQE+ 
Sbjct: 55  TASAAPREMTLVTLNLHHDRED------------WPARRAYIAKELKQLAPDVIALQEVI 102

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  V  +  W            S            A+  K   + Q    L    D
Sbjct: 103 ERRG--SVENQAAWLARRLGYAYTFASVDPPGAPKRYGNALLSKRRVLAQHQRLLQPLDD 160

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A  L V+++G+ + V   HL         E + +   +  ++Q   L D+I
Sbjct: 161 Y------RVAAHLQVDMDGRPVNVYVTHLN--------ERSDARGAATRTRQVADLLDFI 206

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                +  P VIAGDFN   + L          D   S+ R      S  N +       
Sbjct: 207 ASN-SNQAPVVIAGDFNTAADTLDLEALRKGYGDSYGSVHRNSDATVSTLNLHV-FDKPA 264

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            ID+    QN           +  Y      + G+  SDH  + +   F
Sbjct: 265 RIDHVFFQQNRLLAREARILFDTPY------ADGRWASDHYGVWVRLQF 307


>gi|293395887|ref|ZP_06640169.1| exodeoxyribonuclease III [Serratia odorifera DSM 4582]
 gi|291421824|gb|EFE95071.1| exodeoxyribonuclease III [Serratia odorifera DSM 4582]
          Length = 268

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 84/311 (27%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +         H  +A+  K   +  +        D+      R
Sbjct: 42  FP-------LEEVSKHGYHVFYHGQKGHYGVALLTKEAPIAVRRGFPTDDDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E     + V++       F       +       ++  Q L+D++ Q+     
Sbjct: 90  RIIMADLETPQGMLTVIN-----GYFPQGESRDHPVKFPAKTRFYQDLQDYLEQQLSVEN 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N   +                           +   + ++    +  + +  
Sbjct: 145 PVLIMGDMNISPSDYDIGIGEENRKRWLRTGKCSFLPEEREWMGRLLN-WGLVDTYRQAN 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
             R +       +           ID  +         +           D      ++ 
Sbjct: 204 PERNDQFSWFDYRSKGFDDNRGLRIDLLLASTPLAARCVATGI-------DYQTRSMEKP 256

Query: 293 SDHCPISIDYD 303
           SDH P+  ++D
Sbjct: 257 SDHAPVWAEFD 267


>gi|28897872|ref|NP_797477.1| putative phospholipase C [Vibrio parahaemolyticus RIMD 2210633]
 gi|260361802|ref|ZP_05774827.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           K5030]
 gi|260877031|ref|ZP_05889386.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AN-5034]
 gi|28806085|dbj|BAC59361.1| putative phospholipase C precursor [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308093920|gb|EFO43615.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AN-5034]
 gi|308113224|gb|EFO50764.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           K5030]
          Length = 442

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 88/291 (30%), Gaps = 36/291 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++L+++NI  L                   Y L+  Y K    D++  QE+ +    A
Sbjct: 176 QNLKLMTYNIWALPAIASHIGD---------RYELIPDYVKGY--DVLAFQEVFASGRDA 224

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +        + +     +         I   I  R   V   Q  +P     D F+   
Sbjct: 225 FLRELAKEYPYQTKMLDKDGFNVYDGGVI---IVSRYPIVNEAQYVFPDCSGTDCFADK- 280

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +   G+   V   H  SF    + E           QQ + +   +     +
Sbjct: 281 --GVNYAEIIKGGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSLN--IPN 331

Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251
               V +GDFN   + + G+       +   +    +     S  +   N          
Sbjct: 332 NETVVYSGDFNVNKLKFPGDYQQMIANLSAMEPQ--YSGYTASTFDPRINNFAGEALSGG 389

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N   +DY ++          ++  ++  +  +   +   LSDH P+S   
Sbjct: 390 ENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVI 440


>gi|329961023|ref|ZP_08299302.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328532309|gb|EGF59113.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 348

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 101/354 (28%), Gaps = 63/354 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSV---------- 47
           ++ + L  +F L     +  Q      R++ +N+  L +    SL  +            
Sbjct: 1   MKAFCLPFLFLLSTSLHAQEQADTLTFRILGYNVENLFDYRHDSLKNDYEFLPGATRHWN 60

Query: 48  -KRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102
             +       + +            IV L E+ + + +  +     + I    +     +
Sbjct: 61  YTKYKKKLDNIARAIIAAGEWNPPAIVALCEVENDSVMRDL---TCYSILKEADYRYVMT 117

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLD 161
           +      I  A+  ++   ++L     L   K   +    R  + +  ++ N   + V  
Sbjct: 118 QSPDERGIDVALMYQRGCFKLLSSQ-SLSVEKPHKNSRPTRDILHVCGQLLNHDSLDVFV 176

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLG 219
           +HL S             S       AQ LKD +    +  +    +I GDFN       
Sbjct: 177 VHLPSRSGG------AKESEPYRLLAAQRLKDAVDSLYKVRNRAQILIMGDFNDYPANKS 230

Query: 220 NNDDFWKT--------IDPNDSLIRFPKEKDSR--CNANKNLRNKIPIDYFVMDQNAYKF 269
                           ++P+        +  +R    + K       +D+ ++  N  + 
Sbjct: 231 VRQILKAEVPSSVSGSLNPHRLYHLLAGKAAARKHFGSYKYQGEWGLLDHIIVSGNLLQA 290

Query: 270 LIQESFSEI---------------------LYNEDDIKSRGKRLSDHCPISIDY 302
               S  E                       +            SDH P+  D+
Sbjct: 291 GSPLSADEKRADVFSLPFLLTEDPNYGGKQPFRTYYGMKYQAGYSDHLPVWADF 344


>gi|301632179|ref|XP_002945168.1| PREDICTED: exodeoxyribonuclease III-like [Xenopus (Silurana)
           tropicalis]
          Length = 263

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 90/303 (29%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN+L+                     +  +      D + LQE+         
Sbjct: 1   MRITTWNINSLA----------------VRLPQVLDWLAANPVDALALQEL---KLTDDK 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP + +           +         +  +A+  +          + G  D  +R    
Sbjct: 42  FPADAFAA-------AGYRAVVFGQKTYNGVAILSRYPMTDVVRN-IPGFADEQAR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++     + +++ +  +     S +  Y        +  Q L+DW+  +     
Sbjct: 90  -VIAATLDTPTGPLRLVNGYFVNGQAPGSDKFAYK------MRWLQALQDWLRSELALHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              + GDFN       ++D                 ++ +     +  F +       + 
Sbjct: 143 RLALVGDFNVAPEDRDSHDPEGLRETIHHTTQERLHFQALLGLGLVDAF-RLFVQPEKSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++ Q     +   +        D +  + K+ SDH P+ 
Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSQMLAPLVSACAV-------DRLPRKNKQPSDHAPVV 254

Query: 300 IDY 302
           +  
Sbjct: 255 VTL 257


>gi|171913306|ref|ZP_02928776.1| hypothetical protein VspiD_19040 [Verrucomicrobium spinosum DSM
           4136]
          Length = 299

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/295 (9%), Positives = 69/295 (23%), Gaps = 34/295 (11%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + ++NI   + ++G +              ++    +    D++ +QE   +        
Sbjct: 22  VGTFNIRYDNPRDGENGNG-----WLQRAPVVASLIRFHRFDVLGIQEALHHQVEDLQRH 76

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
              +          + +   +       +   K +        P L     +    NR  
Sbjct: 77  LPAYAHAGCGRDDGHEAGEFAAIFYRKDVFTLKDSGTFWLSPTPELP-SIGWDAKFNRIC 135

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
             + +E N     +   +     F             L+  + + +            P 
Sbjct: 136 TWVKLESNKTHETLYVFNTH---FDHHGTTARLEGARLILAKIREIA--------GGRPT 184

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--NLRNKIPIDYFVMD 263
           V+ GDFN                  +       +   +               ID+    
Sbjct: 185 VLTGDFNVDQTSESYRRIHDSQFLADGFETAEERYALNGTANGFKVTAYTDRRIDHIFHT 244

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303
           +                   D    G               +  SDH P+ ++ +
Sbjct: 245 RGFKVLRYGVLTDSYRSPSGDAAETGSVAFPREMKFRNYLPRTPSDHFPVLVELE 299


>gi|299134949|ref|ZP_07028140.1| exodeoxyribonuclease III [Afipia sp. 1NLS2]
 gi|298589926|gb|EFI50130.1| exodeoxyribonuclease III [Afipia sp. 1NLS2]
          Length = 260

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 92/305 (30%), Gaps = 69/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  + K  + D+V LQE+     + + 
Sbjct: 1   MRIATWNVN----------------SVRQRLDHLLTWLKEREPDLVCLQEI---KCLDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + ++           +A+  K      +       +D  +R    
Sbjct: 42  FPRE-------PIEALGYNVVTHGQKTFNGVALLSKYRFEETRPQLAGDPEDLHARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V        +  ++L +   +++ +  Y        +    L ++  ++ +S  
Sbjct: 92  --LEGVVSHKDGTFRLACLYLPNGNPVNTEKYPYK------LRWMDRLIEYARERLKSEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSLIRFPKEKDSRCNAN 248
           PFV+AGDFN         +     ++                N  L    +         
Sbjct: 144 PFVLAGDFNVIPTPADVYNP-QAWLEDALFLPQTRDKFQTLLNLGLTDAFRATSDAPRQY 202

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +M   A   L            D      ++ SDH P+ 
Sbjct: 203 TFWDYQAGAWQKNNGIRIDHLLMSPPASDRLKAAGI-------DKHVRGWEKASDHVPVW 255

Query: 300 IDYDF 304
            D DF
Sbjct: 256 ADLDF 260


>gi|150390789|ref|YP_001320838.1| endonuclease/exonuclease/phosphatase [Alkaliphilus metalliredigens
           QYMF]
 gi|149950651|gb|ABR49179.1| Endonuclease/exonuclease/phosphatase [Alkaliphilus metalliredigens
           QYMF]
          Length = 379

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 79/277 (28%), Gaps = 54/277 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +++R++S+NI+                        + +  K   A+++ LQE+  +    
Sbjct: 150 KRLRIMSYNIH-----------IGRDLFGRYSLDQIAEVIKESRAEVIGLQEVDQHFIRT 198

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K   +  +           +    +        AV   +     ++  +   +       
Sbjct: 199 KFQDQIKYLSEELGM-NYAYGPNLNIVGAKYGNAVLSVHPIEDYENVMIPSGR------E 251

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R  ++  +++ G+ +     HL               +      Q + ++  I   +  
Sbjct: 252 SRGLLKTTIDVEGQLVDFFVTHLGL-------------NQKERMGQVKVIEQQIDMAQN- 297

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++ GDFN + +                 L    +   +             IDY  
Sbjct: 298 --PVILVGDFNARPHSQEIQKL------SRGLLDVGKRMGYNDTPTFDLPVLSGRIDYIF 349

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +DQ                     +    R SDH P+
Sbjct: 350 VDQQM--------------EILTYRVIKSRASDHYPV 372


>gi|251789807|ref|YP_003004528.1| exodeoxyribonuclease III [Dickeya zeae Ech1591]
 gi|247538428|gb|ACT07049.1| exodeoxyribonuclease III [Dickeya zeae Ech1591]
          Length = 268

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 80/310 (25%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +    F        +         H  +A+  K   +  +        D+      R
Sbjct: 42  FPLDEVKQF-------GYHVFYHGQKGHYGVALLTKAEPLAVRRGFPTDDDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       ++  Q L+ ++ Q  +S  
Sbjct: 90  RIIMADLATPLGTLTVVN-----GYFPQGESRDHPVKFPAKTRFYQDLQHYLEQHHQSEQ 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                               ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPADQDIGIGEENRKRWLRTGKCSFLPEEREWMERLKNWGLVDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +                     D      ++ S
Sbjct: 205 ECQDRFSWFDYRSAGFDDNRGLRIDLIMATPPLASRCAATGI-------DYAIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH P+  ++ 
Sbjct: 258 DHAPVWAEFT 267


>gi|194366452|ref|YP_002029062.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
 gi|194349256|gb|ACF52379.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
          Length = 297

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 90/286 (31%), Gaps = 36/286 (12%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    + +V++N++   E               S    +    K L  D + LQE+    
Sbjct: 44  APGMSMSMVTFNLHHDRED------------WPSRRRSIVAELKRLQPDAIALQEVIQRR 91

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +     +  W         +  S            A+  +   + +  + LL   D   
Sbjct: 92  TLR---NQAQWLASQLGYTYLFVSTDPVGAPKRYGNALLTRRPVLARNDHLLLPLDDY-- 146

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R    L ++++G+ + V   HL         E +      +   Q + L  +IT  
Sbjct: 147 ----RTVAHLRIDVDGRPVNVYATHLN--------ERSDESGQRIRRTQVEDLLRFITAT 194

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +  P VIAGDFN  ++    ++   +  D   S+                 +    ID
Sbjct: 195 SAA-APVVIAGDFNALVDAGDLSELRSRYGDSYGSVHVNTDLAGVSTLNRHYYQAPSRID 253

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +    Q+    ++      +    DD    G+  SDH  +     F
Sbjct: 254 HIFFQQD---EMVAREAKILFDQPDDS---GRWASDHYGVWTRLQF 293


>gi|304410511|ref|ZP_07392129.1| conserved hypothetical protein [Shewanella baltica OS183]
 gi|307304604|ref|ZP_07584354.1| conserved hypothetical protein [Shewanella baltica BA175]
 gi|304350995|gb|EFM15395.1| conserved hypothetical protein [Shewanella baltica OS183]
 gi|306912006|gb|EFN42430.1| conserved hypothetical protein [Shewanella baltica BA175]
          Length = 870

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 103/378 (27%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66
             + +    +R+ S+N+       +G     +   R              +      ++A
Sbjct: 455 APSVATKGDLRVASFNVLNFFNDVDGGDTNPSGSNRGALTLEEMVLQRTKIVSAITAMNA 514

Query: 67  DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +     K               P+N +     T+      K    + I   
Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTPENAYSFVEITDADKYDGKYFGTDAITVG 574

Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                  + ++       +  + A  R ++    +I+ +
Sbjct: 575 MLYRGGKVTLAGAAQAIDTPEQHASAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 SLTVVVNHLKSKGSGCLEDWANFEESVDPADQQGKCNAFRVSAAKVLGETLKDVKGDLLI 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  DF+   +        W T+D                 +    K
Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSDRDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANASLAKRLVDIEDWHINSVESNLFEYGKKFSGDLAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ +   +
Sbjct: 815 ENAFSASDHDPVIVALSY 832


>gi|153001981|ref|YP_001367662.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS185]
 gi|151366599|gb|ABS09599.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS185]
          Length = 870

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 103/378 (27%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66
             + +    +R+ S+N+       +G     +   R              +      ++A
Sbjct: 455 APSVATKGDLRVASFNVLNFFNDVDGGDTNPSGSNRGALTLEEMVLQRTKIVSAITAMNA 514

Query: 67  DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +     K               P+N +     T+      K    + I   
Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTPENAYSFVEITDADKYDGKYFGTDAITVG 574

Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                  + ++       +  + A  R ++    +I+ +
Sbjct: 575 MLYRGGKVTLAGAAQAIDTPEQHASAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 SLTVVVNHLKSKGSGCLEDWANFEESVDPADQQGKCNAFRVSAAKVLGETLKDVKGDLLI 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  DF+   +        W T+D                 +    K
Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSDRDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANASLAKRLVDIEDWHINSVESNLFEYGKKFSGDLAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ +   +
Sbjct: 815 ENAFSASDHDPVIVALSY 832


>gi|251792404|ref|YP_003007130.1| exonuclease III [Aggregatibacter aphrophilus NJ8700]
 gi|247533797|gb|ACS97043.1| exodeoxyribonuclease III [Aggregatibacter aphrophilus NJ8700]
          Length = 267

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 88/311 (28%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L +       D++ LQE  +       
Sbjct: 1   MKVMSFNINGL----------------RARPHQLEEIIDKYQPDVLGLQEIKVADEVFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + + +                 H  +A+  K   +  +       +++  R  
Sbjct: 45  ELVDHLGYHVNHY------------GQKGHYGVALLSKQAPLSVKKGFPTDGEEAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               + + +E    ++ V++       F       +        +    L+ ++ Q+  +
Sbjct: 91  ---IIMIDLETPFGQLTVIN-----GYFPQGESRKHPTKFPAKQKFYADLQRYLEQEHNA 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L    ++++ +        F   
Sbjct: 143 ENPVIIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRYM 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ + ++      +                  ++
Sbjct: 203 NPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|296133066|ref|YP_003640313.1| Endonuclease/exonuclease/phosphatase [Thermincola sp. JR]
 gi|296031644|gb|ADG82412.1| Endonuclease/exonuclease/phosphatase [Thermincola potens JR]
          Length = 224

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 76/280 (27%), Gaps = 59/280 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++++N+++                       +    +     IV L E+   +     
Sbjct: 3   IRVMTYNVHSC-----------IGLSKKDSLPQINNLFEVYKPSIVGLNEVEKMSPRTLF 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +            +               A+  K   +  +   L        +   R
Sbjct: 52  VDQAKKLAQNWFPYYVFGPAIKIGPFGFFGNAILSKFPIIAWECIKLHS------KIEFR 105

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             ++  +++ G ++ V+  HL                      Q + L   I        
Sbjct: 106 ACIKARIQLPGTELTVVVTHLGLNK-------------EERVGQIETLAGLIR---GERT 149

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GDFN   + L   +   + +  N           +             IDY ++ 
Sbjct: 150 PVILMGDFNAFTDELRPLEGLVRDLGVNSGPTFPADNPTA------------RIDYILVS 197

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +N    ++  S   I  +           SDH P+    +
Sbjct: 198 EN----IVDYSLEVINSD----------ASDHLPVLATLE 223


>gi|145629100|ref|ZP_01784899.1| exodeoxyribonuclease III [Haemophilus influenzae 22.1-21]
 gi|145639670|ref|ZP_01795273.1| exodeoxyribonuclease III [Haemophilus influenzae PittII]
 gi|144978603|gb|EDJ88326.1| exodeoxyribonuclease III [Haemophilus influenzae 22.1-21]
 gi|145271227|gb|EDK11141.1| exodeoxyribonuclease III [Haemophilus influenzae PittII]
 gi|309750640|gb|ADO80624.1| Exodeoxyribonuclease III [Haemophilus influenzae R2866]
          Length = 267

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K    + +       +D+  R  
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQKPKVVRRGFPTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V++       F       +        +    L+ ++ ++ + 
Sbjct: 91  ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L     +++ +        F K 
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ Q   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|255322370|ref|ZP_05363516.1| putative endonuclease/exonuclease/phosphatase [Campylobacter showae
           RM3277]
 gi|255300743|gb|EET80014.1| putative endonuclease/exonuclease/phosphatase [Campylobacter showae
           RM3277]
          Length = 445

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 98/292 (33%), Gaps = 55/292 (18%)

Query: 23  KVRLVSWNINTLSE--QEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQE 73
           ++++ ++N   L +   +G       V ++        + +  +    K L+ADI+ LQE
Sbjct: 26  ELKIATFNAQNLFDAKNDGSEYNDFVVGKSEWNEKKASAKFKAVSAKIKELNADIIALQE 85

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +   + ++     +  F  ++                 +AV  +         P    
Sbjct: 86  IENEMILKELMKDAGYKYFAFSKDKNGP----------VGLAVLSRIK-------PEKTQ 128

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             S      R  ++L  E++G+K  +L++H  +                   +Q +    
Sbjct: 129 IFSVPNVKTRDILKLDFEVDGQKFSLLNLHFPARKNP--------------LKQRKTAFI 174

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            +          V+ GDFN          D   + +  +  +  PK      +   +  +
Sbjct: 175 TLKSTLIDAEKVVVLGDFNTPYGDKELLGDLATSKNLANLWVFLPK------HERYSHTS 228

Query: 254 KIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +D+ ++ ++   +  +  SF             G ++SDH  +    +F
Sbjct: 229 LNALDHVLLSKDALSQNYVLNSFKIE--------RDGAQISDHFALVFRLNF 272


>gi|332827055|gb|EGJ99843.1| hypothetical protein HMPREF9455_00267 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 285

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 96/312 (30%), Gaps = 38/312 (12%)

Query: 1   MIRKY-VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           M R + + A+V  LV CT S    + ++S+NI   +  + ++ W     +   D     Q
Sbjct: 1   MKRLFYLFAVVSLLVSCTRSKPLDLNVMSFNIRYDNPGDSLNSW-----QYRKDIA--AQ 53

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             K  +ADIV  QE+              +                             K
Sbjct: 54  TIKAQNADIVGAQEVLVNQLNDLKASLPEYNAIGIGRIDGIEKGEYCAILYKKDRFKEIK 113

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTY 177
           +        P +     +  A  R A  +++E   + K+I+ ++ HL         +   
Sbjct: 114 SGHFWLSETPEVIGSKGWDGACERVATWIVLEEISSKKQIFFINTHL-----DHVGKMAR 168

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDS 233
               +LL Q+   L           +P ++ GDFN   +               +     
Sbjct: 169 QEGVTLLLQRIGEL--------SKGLPVILTGDFNATPDSDVIKHVTDPANPNYLMHTKD 220

Query: 234 LIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +       +   +      L  +  IDY  +  +            + +     +   K 
Sbjct: 221 IAVVKSGTNWTFHGFGQVPLEKREFIDYIFVKPDT---------KVLKHTVIPEELDSKF 271

Query: 292 LSDHCPISIDYD 303
           +SDH  I+   +
Sbjct: 272 ISDHSAITAQIE 283


>gi|315659955|ref|ZP_07912813.1| sphingomyelin phosphodiesterase [Staphylococcus lugdunensis M23590]
 gi|315494856|gb|EFU83193.1| sphingomyelin phosphodiesterase [Staphylococcus lugdunensis M23590]
          Length = 329

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 106/326 (32%), Gaps = 37/326 (11%)

Query: 1   MIRKYVLALVFFLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           +I   V+   F LV  + + A        +++ + N+  L      +++ N  +   +D 
Sbjct: 11  IITTIVVLSSFLLVFSSITYASERNTEDSLKITTHNVYFLPT----AIYPNWGQSQRADL 66

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-- 112
                Y +    D+V L E+  + A  ++         Y T  +   ++           
Sbjct: 67  ISKADYIQGQ--DVVILNELFDHKASNRLLTNLKSQYPYQTPIVGQGTEGWQKTSGSYRK 124

Query: 113 ------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  + +  K   V Q+ +       + S  GN+    + +  NGK   ++  HL++
Sbjct: 125 LKKVSGGVGIVSKWPIVQQEQHIYKNGCGADS-VGNKGFAYIKINKNGKYQHIIGTHLQA 183

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
               +          ++   Q + +K +I  +      P  I GD N             
Sbjct: 184 ----EDPVCMKGKDQTIRQSQMEEIKQFIKDKNIPKDEPVYIGGDLNVIKGSAEYQKMSD 239

Query: 226 KTIDP-----NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                       +   +  + +   N N        +DY ++D++  +     + +  + 
Sbjct: 240 NLNVSMPKQYEGNAYSWDTQTNGIANYNYPKLEPQHLDYILLDRDHAQPSSWHNHTHKVK 299

Query: 281 NEDDIKSRGKR------LSDHCPISI 300
           + +       +       SDH P+S 
Sbjct: 300 SPEWSVKSWGKTYRYNDYSDHYPVSA 325


>gi|291441116|ref|ZP_06580506.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291344011|gb|EFE70967.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 331

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 85/307 (27%), Gaps = 40/307 (13%)

Query: 7   LALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           L L    +P  A+ A+      + ++S+N+   S  E                 ++R   
Sbjct: 52  LPLASTALPPGAASAKERPDRPLEVMSFNLRFASAAE--------PHSWAVRRPVMRDLL 103

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +     ++  QE                  +  T R        +     T   V  +  
Sbjct: 104 RRERPHVIGTQEGLYPQLRDIEADLGPAYDWIGTGREGGSRDEFTAVLYDTQRLVPLEYD 163

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYS 178
                  P + A +++  A  R A  +        G++  VL+ HL +            
Sbjct: 164 HFWLSDTPDVIASNTWGNAFVRMATRVRFRDLRAGGREFHVLNTHLDN------------ 211

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRF 237
            +     ++A  L           VP V+ GDFN   +     D      +         
Sbjct: 212 -ASQYARERAAALIADRVGGLGRCVPVVVTGDFNVAAHENPVYDTLLGAGLVDTWEAAAE 270

Query: 238 PKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             E     +  +        ID+ ++             +    + +     G+  SDH 
Sbjct: 271 RGEPYGTFHGYRPPVPGGPRIDWILVTP---------GVTVHRASVNTFAPAGRFPSDHL 321

Query: 297 PISIDYD 303
           P+     
Sbjct: 322 PVQAALT 328


>gi|255013349|ref|ZP_05285475.1| hypothetical protein B2_05535 [Bacteroides sp. 2_1_7]
 gi|298376689|ref|ZP_06986644.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298266567|gb|EFI08225.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 281

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 85/311 (27%), Gaps = 38/311 (12%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           ++K ++ +    +      A+    +++ ++N+   +  +G + W +          ++ 
Sbjct: 1   MKKLIIFVSLLFLAMAYGKAEDKEVLKIATFNLRMDTPSDGENAWFHRK-------DMVN 53

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              +    D+   QE  ++  +  +   + +            +         +      
Sbjct: 54  DLIRFYGFDLFGTQEGFTHQ-LNDILRLSDYRFIGVGRDDGKDAGEHCAIFYRSDRFKVL 112

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENT 176
                    +P    +       NR       E   N K+ +  ++H +        +  
Sbjct: 113 DQGDFWLSEHPEKPGRGWDGTCCNRICTWGKFEDLKNHKQFYFFNVHYEY-----EGDVA 167

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
              S +L+  + + +            P  + GDFN                  +   I 
Sbjct: 168 RRESSNLMISRIKSIA--------GNQPVFLTGDFNAFPTEEPIRILNDSGFLNDSYKIT 219

Query: 237 FPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                   C  +        +  +DY  +           S     Y        G   S
Sbjct: 220 KEAPFGPVCTYHGYDSTIKTEERLDYIWVTD---------SIQIDKYGVLTNTLYGHTPS 270

Query: 294 DHCPISIDYDF 304
           DH P+ +  +F
Sbjct: 271 DHFPVMVVAEF 281


>gi|160876701|ref|YP_001556017.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS195]
 gi|160862223|gb|ABX50757.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS195]
 gi|315268901|gb|ADT95754.1| conserved hypothetical protein [Shewanella baltica OS678]
          Length = 870

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 104/378 (27%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66
             + +    +R+ S+N+       +G  +  +   R              +      ++A
Sbjct: 455 APSVATKGDLRVASFNVLNFFNDVDGGDINPSGSNRGALTLEEMVLQRTKIVSAITAMNA 514

Query: 67  DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +     K               P+N +     T+      K    + I   
Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTPENAYSFVEITDADKYDGKYFGTDAITVG 574

Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                  + ++       +  + A  R ++    +I+ +
Sbjct: 575 MLYRGGKVTLAGAAQAIDTPEQHASAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 SLTVVVNHLKSKGSGCLEDWANFEESVDPADQQGKCNAFRVSAAKVLGETLKDVKGDLLI 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  DF+   +        W T+D                 +    K
Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSDRDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANASLAKRLVDIEDWHINSVESNLFEYGKKFSGDLAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ +   +
Sbjct: 815 ENAFSASDHDPVIVALSY 832


>gi|119773257|ref|YP_925997.1| phospholipase C [Shewanella amazonensis SB2B]
 gi|119765757|gb|ABL98327.1| Phospholipase C [Shewanella amazonensis SB2B]
          Length = 334

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/345 (12%), Positives = 113/345 (32%), Gaps = 53/345 (15%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M + + L +         + A+ ++++++NI  L+ Q+      N   R  +  T L + 
Sbjct: 1   MRKHHALLITLIFALQPQAYAESLKVMAYNIMQLNVQDWDQA--NRAARLPAALTQLSE- 57

Query: 61  AKNLDADIVFLQEMGSYN---AVAKVFPKNTWCIFYSTERLINHSKRD-------SNNDI 110
                 D++ + E  +     A++ +     +      E                S   +
Sbjct: 58  ----QPDVILVSEAFNDEAETALSSLASLYPYQTANVGENCSGADWDALTGSCSNSPMVV 113

Query: 111 HTAIAVRKKNVRVLQQSYPL-LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
              + +  K   ++++++      + S+    N+    + +E NG++  ++  HL++   
Sbjct: 114 RGGVVILSKYPILVRKAHVFNHSLQGSWDDYANKGFAYVAIEKNGERFHLIGTHLQATHD 173

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
            D+     +    +   Q   ++ +I  ++  +    +I GD N + +      D   T+
Sbjct: 174 DDT-----AQEHQVRLGQLGEIQAFIEAEQIPANEAVIIGGDMNVEWSKQQEVTDMLATV 228

Query: 229 DPNDSLIRF---------PKEKDSRCNANKNL-RNKIPIDYFVMDQNAYK---------- 268
           +   +                  +              +DY    Q+  +          
Sbjct: 229 NAGLNFSTPVTGSFSARDNWFTKANAYYFDYSLDYNDTLDYVFWHQDHKQPANNPEMAVR 288

Query: 269 ---------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +   + +  +             LSDH P+ ++++F
Sbjct: 289 YPKAQISWYWWYLKGYWNLSSGRYYHNGYYNELSDHYPVQVNFEF 333


>gi|322420097|ref|YP_004199320.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
 gi|320126484|gb|ADW14044.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
          Length = 246

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 88/286 (30%), Gaps = 46/286 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +    ++++N+++    +                  + +     +ADIV LQE+ +    
Sbjct: 2   SMTFSVMTYNVHSCIGTDRKLSP-----------LRIAEVIDRCNADIVALQELDAGLPR 50

Query: 81  AKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            ++  +              HS           A+  R     +   + P      SF R
Sbjct: 51  TQMTDQAHLIALTLEMSFHFHSSIHMMEGGYGNAVLSRGDVRLIKAGAIPADPLHPSFER 110

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQ 197
              R AV + VE+ G KI VL  H                       QA+ +   +W+ +
Sbjct: 111 ---RGAVWVEVELGGHKIQVLATHFGLNRG-------------ERVSQARAVTGHEWL-E 153

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
             E   P ++ GDFN            ++ +  +   ++   +              + I
Sbjct: 154 HPECRHPAILCGDFNATAGSY-----VYRLLTRHMHDVQRGLKGRLPRGTWPAQFPFMRI 208

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+ +  ++     +    + +              SDH P+    +
Sbjct: 209 DHLLASRDLKVRSVSVPRTPLTRV----------ASDHLPLVATLE 244


>gi|269957862|ref|YP_003327651.1| 5'-Nucleotidase domain-containing protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269306543|gb|ACZ32093.1| 5'-Nucleotidase domain protein [Xylanimonas cellulosilytica DSM
           15894]
          Length = 1577

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 100/348 (28%), Gaps = 66/348 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGV------------------SLWKNSVKRTTSDY--- 54
              +V   +R+ ++N+       GV                  +   N+  R   D    
Sbjct: 488 APEAVGGDLRVATFNVLNYFTTLGVDFGGCSYFADRDGNPIAVNSCPNNGPRGAWDAASL 547

Query: 55  ----TLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHS 102
                 +      LD D+V L E+ +          A+A +               +  S
Sbjct: 548 QRQQDKIVAAVNALDVDVVGLLEIENSAALGEEPDEALATLTDALNADAGGDVWAYVPSS 607

Query: 103 KRDSN----NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEI--NGK 155
               +    + I  AI  R+  V  + ++  L     +    GN R  +         G 
Sbjct: 608 AELPDASEQDAITNAIIYRQAVVEPVGEARALGDQSAAGQAFGNAREPIGQEFAPAGGGD 667

Query: 156 KIWVLDIHLKS-----FCFLDSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVIAG 209
             +V+  HLKS         D+       + +    +QA  L+DW+ +  E      + G
Sbjct: 668 PFFVVVNHLKSKGSAGPWPGDADAGDGQGASNESRVRQATALRDWVDEVTEPGEAVALIG 727

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           DFN   +         + +               +  +         +D+ +++  A + 
Sbjct: 728 DFNAYTHEDP-----LQVLYDAGYTDAASTLSSDQ-WSYSFGGLSGSLDHVLLNGPATER 781

Query: 270 LIQESFSEILYNEDDIKSRGKR--------------LSDHCPISIDYD 303
                  EI  +E       +                SDH P+ +   
Sbjct: 782 ATGADVWEINADESIALQYSRYNYHGTLFHAPDQFASSDHNPVVVGLT 829


>gi|148827197|ref|YP_001291950.1| exonuclease III [Haemophilus influenzae PittGG]
 gi|148718439|gb|ABQ99566.1| exodeoxyribonuclease III [Haemophilus influenzae PittGG]
          Length = 267

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 86/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K    + +       +D+  R  
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVVRRGFPTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V++       F       +        +    L+ ++ ++ + 
Sbjct: 91  ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L     +++ +        F   
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRNL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ Q   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|298370009|ref|ZP_06981325.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281469|gb|EFI22958.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314]
          Length = 256

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 86/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++ +  +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNWLADHQPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++      +        +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHSVWSGQKTYNGVAIISRSEPQDVHT-----GLPAMPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++++  +    DS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATI----GGVRVINVYCVNGEAPDSPKFQYKQ------QWFAALTEFVRDEMARYE 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          K         
Sbjct: 140 KLVLLGDFNIAPTDDDCYDAEKWRGKILCTDSERGWFKNLLDLGLTDSLRKIHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P+ 
Sbjct: 199 TWFDYRGAMFQRGLGLRIDHLLVSPALSAVLKDVQV-------DSDARAQERPSDHAPVW 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|293368736|ref|ZP_06615341.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CMC 3f]
 gi|298480109|ref|ZP_06998308.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
 gi|292636201|gb|EFF54688.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CMC 3f]
 gi|298273918|gb|EFI15480.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
          Length = 611

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 80/304 (26%), Gaps = 63/304 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L +   L          +RL+++NI   +  + +             +  +    
Sbjct: 4   MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52

Query: 62  KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   D+V +QE+ S    +    V  +                           I +  
Sbjct: 53  NNASPDVVAIQEVDSMTRRSGQKYVLGEIAERTQMHACFAPAIE----FEGGKYGIGLLT 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K V +  Q+ PL G      R   R  +    E           HL              
Sbjct: 109 KQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHLSLTEGD-------- 150

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                  +  + +K  I   K+   P  +AGD N +                 +    F 
Sbjct: 151 -----RMKSLEIVKSLIASYKK---PLFLAGDMNAEPESDFIK----------ELQKDFQ 192

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +   +       K  IDY  + +         S   +              SDH PI
Sbjct: 193 ILSNPEKHTYPAPDPKEAIDYIAVSKQNATGFAVISAKVVN---------ELMASDHRPI 243

Query: 299 SIDY 302
            ++ 
Sbjct: 244 LVEL 247


>gi|311105771|ref|YP_003978624.1| exodeoxyribonuclease III 1 [Achromobacter xylosoxidans A8]
 gi|310760460|gb|ADP15909.1| exodeoxyribonuclease III 1 [Achromobacter xylosoxidans A8]
          Length = 260

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 81/306 (26%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L+                     +  +      D++ +QE+   +     
Sbjct: 1   MKLATWNVNSLN----------------VRLPQVLDWLAANPVDVLCIQELKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +                       +
Sbjct: 41  ------KFPEAAFTEAGYHAVWAGQKTYNGVAIISRVPGTSMVRNI------PGYEDPQQ 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + L        + V+  +  +   + S +  Y           + ++ W+  + +   
Sbjct: 89  RVLALTFPSPEGDVRVVCAYCPNGQAVGSDKYAYKLD------WFEAMRAWLADEIKQYP 142

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              + GD+N                           F   +D    L    +  +    +
Sbjct: 143 RLAVLGDYNVAPADEDVHNPEKWEGQVLVSEPERKAFGALLDLG--LADSFRLFEQPEKS 200

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++     K  I  +        D    R ++ SDH P+
Sbjct: 201 FSWWDYRQFAFRRNAGLRIDHVLLSAPLVKRCIACAI-------DKEPRRNEQPSDHAPV 253

Query: 299 SIDYDF 304
               +F
Sbjct: 254 IATLEF 259


>gi|254522846|ref|ZP_05134901.1| endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas sp. SKA14]
 gi|219720437|gb|EED38962.1| endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas sp. SKA14]
          Length = 291

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 89/293 (30%), Gaps = 33/293 (11%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V   A+    ++++S+N+                KR       + +   +    ++  QE
Sbjct: 27  VFAWAATPAPLKVMSFNVR-------TPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQE 79

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +    A         +  F    R              + +   + +        P +  
Sbjct: 80  LVKEQADYLSEHLPGYRWFGEGRR-GGSGDEHMGVFYDSKVLAIEASGNFWLSDTPDVPG 138

Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             ++     R     L     +G++ + +D HL                     + A+ +
Sbjct: 139 SITWGNLYPRMVTWALFRRLEDGRRFYFMDTHLPY----------RDEDEPRRVKGAELI 188

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              +     + +P V+ GDFN +         F + +    + ++ P+      +     
Sbjct: 189 GKRLAT-LPADLPVVLTGDFNSEPG-GETYKAFTRVLQDTRTQVKAPQGPRLTFHDFTGK 246

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +D+ ++            F+   +  DD +  G   SDH P+ ++ D+
Sbjct: 247 ATVQ-LDWVLVRG----------FTARSFLTDDRRIDGVLPSDHFPLVVELDW 288


>gi|319774993|ref|YP_004137481.1| exodeoxyribonuclease III [Haemophilus influenzae F3047]
 gi|329123105|ref|ZP_08251675.1| exodeoxyribonuclease III [Haemophilus aegyptius ATCC 11116]
 gi|317449584|emb|CBY85789.1| exodeoxyribonuclease III [Haemophilus influenzae F3047]
 gi|327471660|gb|EGF17102.1| exodeoxyribonuclease III [Haemophilus aegyptius ATCC 11116]
          Length = 267

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 88/311 (28%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K    + +       +D+  R  
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVVRRGFPTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V++       F      T+        +    L+ ++ ++ + 
Sbjct: 91  ---IIMADLETEFGLLTVIN-----GYFPQGESRTHETKFPAKEKFYADLQQYLEKEHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L     +++ +        F K 
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLSTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ Q   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|308050255|ref|YP_003913821.1| exodeoxyribonuclease III [Ferrimonas balearica DSM 9799]
 gi|307632445|gb|ADN76747.1| Exodeoxyribonuclease III [Ferrimonas balearica DSM 9799]
          Length = 268

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 77/311 (24%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ VS+NIN L                 +    L+        D++ LQE  +       
Sbjct: 1   MKFVSFNINGL----------------RARLHQLQALIDKHQPDVIGLQETKVDDPQFPL 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + + +                 H  +A+  K V +  Q       +D    A 
Sbjct: 45  EAVEAMGYHVAFH------------GQKGHYGVAMLTKQVPLAVQKGFATDEED----AQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +  + + NG+ + VL+       F       +        +    L   +   +++
Sbjct: 89  RRMIMVTVADANGQPVHVLN-----GYFPQGENRDHETKFPAKRRFYADLMSHLNTHRQA 143

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
               V+ GD N                          L    ++  T+        F   
Sbjct: 144 DEQVVVMGDINISPTDLDIGIGEPNAKRWLKTGKCSFLPEEREWLATLLNWGLTDSFRHL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                        +           ID  +        L            D      ++
Sbjct: 204 NPEEAQTYSWFDYRSRGFDDNRGLRIDVILTSAPLTARLDSAGV-------DYELRGIEK 256

Query: 292 LSDHCPISIDY 302
            SDH PI    
Sbjct: 257 PSDHAPIWTTI 267


>gi|322832771|ref|YP_004212798.1| exodeoxyribonuclease III [Rahnella sp. Y9602]
 gi|321167972|gb|ADW73671.1| exodeoxyribonuclease III [Rahnella sp. Y9602]
          Length = 269

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 76/310 (24%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +         H  +A+  K   V  +                R
Sbjct: 42  FP-------LEEVSQHGYHVFYHGQKGHYGVAMLTKQEPVAVRR-----GFPGDDEESQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E     + V++       F       +        +  + L+D++T       
Sbjct: 90  RIIMTDIETPQGILTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQDYLTTSLSVNN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P V+ GD N                          L    ++   +     +  F     
Sbjct: 145 PVVVMGDVNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWMDRLKGWGLIDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +         I           D      +R S
Sbjct: 205 DTADKFSWFDYRSRGFDENRGLRIDLIMASTPLAARCIATGI-------DYDIRGMERPS 257

Query: 294 DHCPISIDYD 303
           DH PI   +D
Sbjct: 258 DHAPIWATFD 267


>gi|300312415|ref|YP_003776507.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1]
 gi|300075200|gb|ADJ64599.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1]
          Length = 255

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 83/303 (27%), Gaps = 74/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      + ++ +    D++ LQE    +     
Sbjct: 1   MKIATWNVNSL----------------KVRLPQVLKWLEENPVDVLCLQETKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    S    +  +A+  ++              +       +
Sbjct: 41  ------KFPAAEIAAAGYLVEFSGQKTYNGVAILSRHPMNDVVKN------NPLFPDEQQ 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E     +  +  ++ +   L+S +  Y             L +W+ Q+K    
Sbjct: 89  RIIAATIE----GVRYVCAYIPNGQSLESEKYPYK------LNWLAALHEWLAQEKAKNP 138

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              + GD+N        +D                 ++ +        + +  +      
Sbjct: 139 RLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQALGLTDSY-RLFEQPEKMY 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++ +                  D +  + ++ SDH P+ 
Sbjct: 198 SWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVI-------DKVPRKWEQPSDHAPVI 250

Query: 300 IDY 302
              
Sbjct: 251 ATL 253


>gi|51092216|gb|AAT94521.1| GH03334p [Drosophila melanogaster]
          Length = 526

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%)

Query: 16  CTAS-VAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           C+A      +RL+ WNI   TL    +G                L+ Q       D++ L
Sbjct: 186 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 245

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+  +  +  V     +   +  +          +N     AI  ++  +++      +
Sbjct: 246 QEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRI 305

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L      S      A  L +  +G++  V   HLK+           +    L ++Q + 
Sbjct: 306 LEVWRVQSN-QVAIAARLRMRSSGREFCVATTHLKARHG--------ALLAKLRNEQGRD 356

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKTIDPND 232
           L  ++ Q      P ++ GDFN +                    Y     D  + + PN 
Sbjct: 357 LIRFVKQFAG-DTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNA 415

Query: 233 SLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  F  +   R       + +        IDY     +  K      F        +  
Sbjct: 416 DVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLYFPAGEQIGKNRT 475

Query: 287 SRGKRLSDHCPISIDYD 303
              +  SDH  +  D++
Sbjct: 476 PSFQYPSDHFSLVCDFE 492


>gi|238794520|ref|ZP_04638129.1| Exodeoxyribonuclease III [Yersinia intermedia ATCC 29909]
 gi|238726203|gb|EEQ17748.1| Exodeoxyribonuclease III [Yersinia intermedia ATCC 29909]
          Length = 271

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 79/310 (25%), Gaps = 73/310 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ VS+NIN L                 +    L    +    D++ LQE         
Sbjct: 3   TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +FP               +         H  +A+  KN  +  +       +D+      
Sbjct: 44  MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKNEPLAVRRGFPTDEEDA-----Q 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +   +  +   + V++       F       +        +    L+ ++ Q+  + 
Sbjct: 92  RRIIMADIATSNGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLSAD 146

Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
              +I GD N                          L     +   +     +  F    
Sbjct: 147 AQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFLPEERAWLARLQNWGLVDTFRAAN 206

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  Q      I           D      ++ 
Sbjct: 207 PECNDQFSWFDYRSRGFDENRGLRIDLLLASQPLATRCIATGI-------DYEIRGMEKP 259

Query: 293 SDHCPISIDY 302
           SDH P+  ++
Sbjct: 260 SDHAPVWSEF 269


>gi|115375620|ref|ZP_01462877.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1]
 gi|115367396|gb|EAU66374.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1]
          Length = 263

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 85/303 (28%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N                   +    L  + K    D++ LQE+   +A    
Sbjct: 7   MKIASWNVN----------------SVRARQERLLNWLKAHQPDVLCLQELKCVDA---- 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +         +  +A+  K          +LG  D    +  R
Sbjct: 47  ------DFPTEAVREAGYHAVTHGQKTYNGVAILSKAEPSDV----VLGLSDGVEDSHAR 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + V+  ++ +   +DS    Y             L+ ++  +     
Sbjct: 97  LIAATV-----SGVRVVSAYVPNGQAVDSPAYVYKLEWYSR------LRRYLEARHTPDQ 145

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD+N     +   D               D  + +        F K         
Sbjct: 146 PLVLCGDWNVAPEPIDVYDPAVWEGQTLFTLKERDALQQVCAFGLADTFRKLHPGVEKKF 205

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+        + L++          D  + +GK+ SDH P+ 
Sbjct: 206 SWWDYRGLSFPKNLGVRIDHIFATAPLVQRLVKAEI-------DREERKGKQPSDHAPVW 258

Query: 300 IDY 302
            ++
Sbjct: 259 AEF 261


>gi|295085529|emb|CBK67052.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A]
          Length = 611

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 81/304 (26%), Gaps = 63/304 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L +   L          +RL+++NI   +  + +             +  +    
Sbjct: 4   MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52

Query: 62  KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   D+V +QE+ S    +    V  +                           I +  
Sbjct: 53  NNASPDVVAIQEVDSMTRRSGQKYVLGEIAERTQMHACFAPAIE----FEGGKYGIGLLT 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K V +  Q+ PL G      R   R  +    E           HL             S
Sbjct: 109 KQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHL-------------S 145

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            +     +  + +K  I   K+   P  +AGD N +                 +    F 
Sbjct: 146 LAEEDRMKSLEIVKSLIASYKK---PLFLAGDMNAEPESDFIK----------ELQKDFQ 192

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +   +       K  IDY    +         S   +              SDH PI
Sbjct: 193 ILSNPEKHTYPAPDPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRPI 243

Query: 299 SIDY 302
            ++ 
Sbjct: 244 LVEL 247


>gi|170726264|ref|YP_001760290.1| endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908]
 gi|169811611|gb|ACA86195.1| Endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908]
          Length = 940

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 86/333 (25%), Gaps = 49/333 (14%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67
           +    +    + + S+N+      +G      + +              +      +DAD
Sbjct: 447 LAPELAAGGNLTVASFNVLNYFNGDGAGGGFPTPRGADTATEFERQRAKIISAMVGIDAD 506

Query: 68  IVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV 121
           +  L E+ +      +A+A +       I  +    +N        D I   +  R   V
Sbjct: 507 LFGLMEIENDGFGSDSAIADLVSGLNTAIGETRYGYVNAGGSSIGTDAIAVGMIYRLDKV 566

Query: 122 --------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCF-- 169
                        S         F+   NR  +     +N   +   V   H KS     
Sbjct: 567 SPQGAAKILSTANSPLDDAGAPLFNDGKNRPMLTQSFSVNDSDESFVVAVNHFKSKGSNC 626

Query: 170 ---LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
               D   N    +C++   +A          +    P ++ GD N              
Sbjct: 627 DSLGDPNLNDGQGNCNVTRTRAAQAVGTWLAAEYPQAPVLLIGDLNAYAQENP-----LT 681

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +        F         +         +D+ + +      ++  +   I  +E  I 
Sbjct: 682 ALKDAGFTELFDHLDKVGAYSYVFSGETGQLDHALANSELIDSVVDVTEWHINTDEPRIL 741

Query: 287 SRG-----------------KRLSDHCPISIDY 302
                                R SDH P+ +  
Sbjct: 742 DYNEEFKSASQIENLYSDSAYRSSDHDPVVVSL 774


>gi|315634109|ref|ZP_07889398.1| exodeoxyribonuclease III [Aggregatibacter segnis ATCC 33393]
 gi|315477359|gb|EFU68102.1| exodeoxyribonuclease III [Aggregatibacter segnis ATCC 33393]
          Length = 267

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 92/309 (29%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L +       DI+ LQE+       +V
Sbjct: 1   MKVMSFNINGL----------------RARPHQLEEIIDKYQPDILGLQEI---KVADEV 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP       Y     + +         H  +A+  K   +L +       +++  R    
Sbjct: 42  FP-------YELVDHLGYHVNHFGQKGHYGVALLSKQAPLLVRKGFPTDDEEAQKR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + ++    ++ V++       F       +        +    L+ ++ Q   +  
Sbjct: 91  -IIMIDLDTPFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N   +                      L    ++++ +        F     
Sbjct: 145 PVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRYLNP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID+ + ++      +    +  +   D       + S
Sbjct: 205 TVNDKFSWFDYRSKGFNDNRGLRIDHILANKALAAHCVDSGIALDIRAMD-------KPS 257

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 258 DHAPIWAEF 266


>gi|297622787|ref|YP_003704221.1| endonuclease/exonuclease/phosphatase [Truepera radiovictrix DSM
           17093]
 gi|297163967|gb|ADI13678.1| Endonuclease/exonuclease/phosphatase [Truepera radiovictrix DSM
           17093]
          Length = 865

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 79/317 (24%), Gaps = 36/317 (11%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A V   +++ S+N+       G     ++ +        L    + +DAD+V L E+
Sbjct: 464 AAPADVGGDLKVASFNVLNYFTTFGSRGAGDAAQFARQR-AKLFAALRRIDADVVGLIEI 522

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +         +N      +     +       +   T     K+       +  L+   
Sbjct: 523 ENNGDGEGSAIRNLVDGLNAVY--GSEVYAVVPDPADTGTDAIKQTFIYKPAALELVAVA 580

Query: 135 DSFSRAGNRRAVELLVEINGKK---IWVLDIHLKSFCFL---DSLENTYSPSCSLLSQQA 188
              +   NR  V       G        +  H KS       D+       +      Q 
Sbjct: 581 SDSASVHNRPPVAATFRQRGAPHGLFTAVVAHHKSKRCSEGFDARPGDTEQAFEGCFNQL 640

Query: 189 QW-------LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           +              +        ++ GD N               +  +       + +
Sbjct: 641 RTEQSQALAAFAADLKAAHGDTDVLLMGDLNAYALEDPI-----AVLTGSGFENLTLRLQ 695

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------ 289
           D+   +         +DY +   +    +       I  +E                   
Sbjct: 696 DAARYSFVFDGESGTLDYALASPSLAAQVTGVDIWHINPDEPRALEYDSAPRFGGEDRFT 755

Query: 290 ---KRLSDHCPISIDYD 303
               R SDH P+ I   
Sbjct: 756 PTPYRSSDHDPVIIGLS 772


>gi|213967028|ref|ZP_03395178.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1]
 gi|301385213|ref|ZP_07233631.1| exonuclease III [Pseudomonas syringae pv. tomato Max13]
 gi|302059606|ref|ZP_07251147.1| exonuclease III [Pseudomonas syringae pv. tomato K40]
 gi|302130154|ref|ZP_07256144.1| exonuclease III [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213928350|gb|EEB61895.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1]
          Length = 270

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 81/312 (25%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  +N  +        G +     +  R
Sbjct: 41  ------QFPLADVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFESDDEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + NG+ + +++       F       +        +  + L+  +  +  +  
Sbjct: 91  FIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGQFSNEQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++ + +     +  F     
Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRYLYP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +        +            D      ++
Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++  
Sbjct: 259 PSDHAPIWLELS 270


>gi|254780288|ref|YP_003064701.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254039965|gb|ACT56761.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 281

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 86/303 (28%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V + +WN+N                   +    L  + K  + DI+ LQE  + +     
Sbjct: 4   VTVATWNVN----------------SIRARIHNLAAWIKENNPDIICLQETKTED----- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    + T + +N+         +  +A+  K   +   ++      D  +R    
Sbjct: 43  -----KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF--- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E    IN + + + +++L     + S +     S        +    + +Q+ E   
Sbjct: 95  --IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS------WIKRFLRFASQRLELEE 146

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P + AGD+N         +      D               N       +      +   
Sbjct: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+ ++   A   L            D       + SDH P+ +
Sbjct: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLL-------HSARIDTKPRGWTKPSDHTPVIV 259

Query: 301 DYD 303
             D
Sbjct: 260 SLD 262


>gi|145630665|ref|ZP_01786444.1| exodeoxyribonuclease III [Haemophilus influenzae R3021]
 gi|260582045|ref|ZP_05849840.1| exodeoxyribonuclease III [Haemophilus influenzae NT127]
 gi|144983791|gb|EDJ91241.1| exodeoxyribonuclease III [Haemophilus influenzae R3021]
 gi|260094935|gb|EEW78828.1| exodeoxyribonuclease III [Haemophilus influenzae NT127]
          Length = 267

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 86/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K      +       +D   R  
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQEPKAVRRGFPTDNEDVQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V++       F       +        +    L+ ++ ++ + 
Sbjct: 91  ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L    ++++ +        F K 
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEEREWYQRLYDYGLEDSFRKM 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ Q   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|16272016|ref|NP_438214.1| exonuclease III [Haemophilus influenzae Rd KW20]
 gi|145636755|ref|ZP_01792421.1| exodeoxyribonuclease III [Haemophilus influenzae PittHH]
 gi|260580655|ref|ZP_05848482.1| exodeoxyribonuclease III [Haemophilus influenzae RdAW]
 gi|1169570|sp|P44318|EX3_HAEIN RecName: Full=Exodeoxyribonuclease III; Short=EXO III;
           Short=Exonuclease III
 gi|1572987|gb|AAC21719.1| exodeoxyribonuclease III (xthA) [Haemophilus influenzae Rd KW20]
 gi|145270053|gb|EDK09990.1| exodeoxyribonuclease III [Haemophilus influenzae PittHH]
 gi|260092717|gb|EEW76653.1| exodeoxyribonuclease III [Haemophilus influenzae RdAW]
          Length = 267

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K    + +       +D+  R  
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVIRRGFPTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V++       F       +        +    L+ ++ ++ + 
Sbjct: 91  ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L     +++ +        F K 
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ Q   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|156934327|ref|YP_001438243.1| exonuclease III [Cronobacter sakazakii ATCC BAA-894]
 gi|156532581|gb|ABU77407.1| hypothetical protein ESA_02158 [Cronobacter sakazakii ATCC BAA-894]
          Length = 268

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 78/311 (25%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFISFNINGL----------------RARPHQLAALVEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   V  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPVSVRR-----GFPGDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +  +   I V++       F       +       ++  Q L+D++     +  
Sbjct: 90  RIIMAEIPSSIGDITVIN-----GYFPQGESRDHEVKFPAKAKFYQDLQDYLETALSNDK 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N                               +   + ++       F    
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMGRLLN-WGLKDTFRHAN 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +        L +          D      ++ 
Sbjct: 204 PETSDRYSWFDYRSKGFDDNRGLRIDLLLASDPLMARLAETGI-------DYDIRAMEKP 256

Query: 293 SDHCPISIDYD 303
           SDH P+   + 
Sbjct: 257 SDHAPVWATFS 267


>gi|302404834|ref|XP_003000254.1| endonuclease/exonuclease/phosphatase family protein [Verticillium
           albo-atrum VaMs.102]
 gi|261360911|gb|EEY23339.1| endonuclease/exonuclease/phosphatase family protein [Verticillium
           albo-atrum VaMs.102]
          Length = 298

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 78/294 (26%), Gaps = 21/294 (7%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           ++  A  VR+V++N+   +    +   K+   R     T L    +  D+  + LQE+  
Sbjct: 8   SSGEALPVRVVTFNVRY-AAPRPMPNEKSWQVRCPKICTQLDFITRGHDSPFLCLQEVLY 66

Query: 77  YNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              +         W          +     S           +          P   +K 
Sbjct: 67  PQLLDIQAGLGEGWGYVGIGRDDGDRLGELSPVFYRVGTWKCEVFKNYWLSETPDRPSK- 125

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            +  A  R                + +      F          S  L+ + A    +  
Sbjct: 126 GWDAALPRIVTVGEFVHKRTGQRAVVMSTH---FDHLGVVAREQSAKLILRIAAQWAE-- 180

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD-SRCNANKNLRNK 254
            +        ++ GDFN   +         K     D+    P EK         +    
Sbjct: 181 ERASSPPAAVILGGDFNSNPSDNAYKSMVAKGSGMADAHALVPSEKRYGNELTYTSFDEP 240

Query: 255 I----PIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDYD 303
                 ID+  +        +  +     +    +    G  LSDH P+  D +
Sbjct: 241 DQQAVRIDFIFV-------KVPSNVKVTTFGVLTNRFDDGVFLSDHRPVVADLE 287


>gi|153809236|ref|ZP_01961904.1| hypothetical protein BACCAC_03547 [Bacteroides caccae ATCC 43185]
 gi|149128212|gb|EDM19432.1| hypothetical protein BACCAC_03547 [Bacteroides caccae ATCC 43185]
          Length = 353

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/351 (11%), Positives = 88/351 (25%), Gaps = 56/351 (15%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQ-------EGVSLWKNSVKRTTSD 53
           M ++    + F L+       +  ++V +N+    +        +     +   K  T+ 
Sbjct: 10  MKKQLFCTIFFVLLISVCFGQKPYKVVFYNLENFFDTINDPEVKDDEFTPEGPKKWNTAK 69

Query: 54  Y-TLLRQY---------AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
           Y   L                   ++ + E+ + N +  +               I+H  
Sbjct: 70  YNKKLGNIERVLFGMAAIDKEYPIVIGVSEVENRNVLEDIVATPK---LAPGNYRISHFD 126

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                 +  A   R    ++    YP+     S      R  + +   I  +  + +  H
Sbjct: 127 SPEARGVDVAFLYRPDVFKLE-GQYPVKTVIPSLPDFKTRDILTMWGTIEDEPFFFMVAH 185

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
             S      +      +     +Q + + D + Q   +    V+ GDFN         + 
Sbjct: 186 WPSRLGGKDVSEFKRIAV---GRQMRSIADSVLQANPATK-IVMMGDFNDDPTDKSITEG 241

Query: 224 F-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ------ 272
                  K +   D    +     +              D  V+ +N  K          
Sbjct: 242 LGAKLKMKDLSAGDLYAPYADMLKAGYGTLAYGDAWNIFDNIVISENLAKGSTGKLKIQK 301

Query: 273 --------------------ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                 +           +     SDH P+ I   
Sbjct: 302 APGSKFYGNIFKQHYMIQKEGQYKGYPLRTYVGNNFQGGFSDHFPVYIYIS 352


>gi|271500687|ref|YP_003333712.1| exodeoxyribonuclease III [Dickeya dadantii Ech586]
 gi|270344242|gb|ACZ77007.1| exodeoxyribonuclease III [Dickeya dadantii Ech586]
          Length = 268

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 82/310 (26%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAVIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +    F        +         H  +A+  K   +  +       +D+      R
Sbjct: 42  FPLDDVKQF-------GYHVFYHGQKGHYGVALLTKAEPLAVRRGFPTDDEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       ++  Q L+ ++ Q  ++  
Sbjct: 90  RIIMADLATPLGTLTVVN-----GYFPQGESRDHPVKFPAKTRFYQDLQHYLEQHHQADQ 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWMERLKNWGLVDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +                     D      ++ S
Sbjct: 205 ECQDKFSWFDYRSSGFDDNRGLRIDLIMATSPLASRCTATGI-------DYAIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH P+  ++ 
Sbjct: 258 DHAPVWAEFT 267


>gi|226225662|ref|YP_002759768.1| hypothetical protein GAU_0256 [Gemmatimonas aurantiaca T-27]
 gi|226088853|dbj|BAH37298.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 257

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 79/293 (26%), Gaps = 52/293 (17%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
                          + S+NI      +GV            D     +    L AD+V 
Sbjct: 11  VLAATRVPPQDDAFTVASYNIRHGRGMDGV-----------VDLHRTGEAIARLGADVVA 59

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+      +    +        +      +           +A+  +      Q+  L
Sbjct: 60  LQEVDRNVERSGRVDEPRVLGEQLSMSHAFGAF-MPYQGGEYGMAIVSRLPIRRSQALRL 118

Query: 131 LGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                       R A+   +E+  G ++ V+++H                   L   Q +
Sbjct: 119 PDGN------EPRVALLAELELPSGARVLVVNVHFDWVGNDT-----------LRYAQVK 161

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L   +       +P ++ GDFN +           +T+       R   + +S      
Sbjct: 162 ALGAVLDTV---RLPVILLGDFNDQPAS--------RTLQHWQPRFRVAAKPESDRFTFS 210

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   K  ID+ +              +  +  +          SDH PI    
Sbjct: 211 STEPKQEIDHIL----LAPARAWGEATVRVITDPIT-------SDHRPIVAQL 252


>gi|237731238|ref|ZP_04561719.1| exonuclease III [Citrobacter sp. 30_2]
 gi|226906777|gb|EEH92695.1| exonuclease III [Citrobacter sp. 30_2]
          Length = 272

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 81/312 (25%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      I V++       F       +       +   Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSPLGSITVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  +  
Sbjct: 146 RDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLLGWGLVDTYRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               + +       +           ID  +      +   +          D      +
Sbjct: 206 ANPEKNDQFSWFDYRSKGFDDNRGLRIDLLLASNPLAERCEETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWAKF 270


>gi|261343612|ref|ZP_05971257.1| exodeoxyribonuclease III [Providencia rustigianii DSM 4541]
 gi|282567993|gb|EFB73528.1| exodeoxyribonuclease III [Providencia rustigianii DSM 4541]
          Length = 271

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 87/310 (28%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L    +    +++ LQE         +
Sbjct: 1   MKFISFNINGL----------------RARPHQLAAIIEKHQPEVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +           + +         H  +A+  KN  +  +       +D+      R
Sbjct: 42  FPYDE-------VSKLGYHVFYHGQKAHYGVALLLKNEPIAVRKGFPNDDEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   ++ N   + V++       F       +        +  Q L+D++T  +    
Sbjct: 90  RIIMADIQTNQGLLTVVN-----GYFPQGESRDHPTKFPAKQKFYQDLQDYVTSTQTPES 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N     L                         ++   +     +  + ++  
Sbjct: 145 QLLIMGDMNISPTDLDIGIGEVNRKRWLKTGKCSFLPEEREWLARLLDWGLVDTYREQHP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              ++      +           ID  +  +                  D      ++ S
Sbjct: 205 DTTDSYSWFDYRSKGFDDNRGLRIDLLLASKKLASRCTATGI-------DLEIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH P+  ++D
Sbjct: 258 DHAPVWAEFD 267


>gi|222150158|ref|YP_002551115.1| Metal-dependent exonuclease protein [Agrobacterium vitis S4]
 gi|221737140|gb|ACM38103.1| Metal-dependent exonuclease protein [Agrobacterium vitis S4]
          Length = 286

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 89/310 (28%), Gaps = 54/310 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +R VS+NI      +G             D   + +      AD++ LQE+         
Sbjct: 1   MRFVSYNIQYGIGLDGKF-----------DPIRIAKNL--EGADVIALQEVTRGYPANGG 47

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINH---SKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                  A  FP+  W    + +   +      R  +        V  +   +  +   L
Sbjct: 48  ADLPEIFANHFPEYHWVYGPACDLHASSALIKGRRVDKRFQFGNMVLSRWPILANRMLLL 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ---- 186
              +        R A E +++  G  + V  +HL      + +          ++     
Sbjct: 108 PRTRTFEKLNNQRAATEAVIDAPGGALRVYSVHLDHVAPDERIAQIRFLKDRAINFIQEG 167

Query: 187 -QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------FWKTIDPNDSLIRFP 238
                 +++   +      F++ GDFN +       +        + +T   +  L    
Sbjct: 168 GAMTGGQEFALPQPPLPEDFLLMGDFNMQPESPEYREMVGTIDAYYGRTARADAPLDALA 227

Query: 239 KEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +       +           ++ +DY  +  +    L   S                  S
Sbjct: 228 RLGKLNAGSYSWEEVGKPDMRMHLDYCFLSGSLAHRLKAASV-----------DTDAVGS 276

Query: 294 DHCPISIDYD 303
           DH P+ ++ D
Sbjct: 277 DHFPVWVELD 286


>gi|172062389|ref|YP_001810040.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
 gi|171994906|gb|ACB65824.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
          Length = 604

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 93/316 (29%), Gaps = 48/316 (15%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGMGGGFDDPNNRGAKNYQEFQRQEAKIVSALKALDADVIGLMEIQ 352

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         +       S  R+++    R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELSAVRQLAAKLGSNWRVVDPGTSRLGGDAITVAMIYDSRTVE------PVGRAS 406

Query: 135 DSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185
                  NR+ +         N + + +   HLKS    D+  +               +
Sbjct: 407 TLAIDDKNRQPLAQSFRRVGGNKQALTIAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A  L DW+       +    ++ GDFN             + ++         +   +
Sbjct: 467 RAAAKLADWLAGTPTGVAGQGTLLIGDFNSYTYEDPI-----RLLEARGYRNLVSRWIGA 521

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIK 286
              +         +D+ +        +       I  +E                     
Sbjct: 522 NAYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTYYA 581

Query: 287 SRGKRLSDHCPISIDY 302
               R SDH P+ ID 
Sbjct: 582 PDAYRSSDHDPVLIDI 597


>gi|261493298|ref|ZP_05989824.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496564|ref|ZP_05992944.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307767|gb|EEY09090.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310942|gb|EEY12119.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 291

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 91/325 (28%), Gaps = 77/325 (23%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +FF +  T  +   ++ +S+NIN L                 +    L    +    D++
Sbjct: 11  IFFFILQTLRLGLSMKFISFNINGL----------------RARPHQLEAIIEKHQPDVL 54

Query: 70  FLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            LQE  +   +    +     + +F+                 H  +A+  K   +  + 
Sbjct: 55  GLQEIKVADEDFPYDLVNHLGYHVFHH------------GQKGHYGVALLTKKEPIAVRK 102

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                  D+  R      +   +E +   + VL+       F      ++        + 
Sbjct: 103 GFPTDVLDAQKR-----MIMADIETDFGVLTVLN-----GYFPQGENRSHETKFPAKQKF 152

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY---------------------LGNNDDFWK 226
              L++++  + +   P +I GD N                          L    ++  
Sbjct: 153 YADLQNYLESELKPENPIIIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFLPEEREWLD 212

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSE 277
            +     +  F        +       +           ID  +  ++  +  ++     
Sbjct: 213 RLYSYGLVDTFRAGNPDVNDKFSWFDYRSKGFDDNRGLRIDLILASKSLAERCVETGI-- 270

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
                D      ++ SDH P+   +
Sbjct: 271 -----DLDIRAMEKPSDHSPVWATF 290


>gi|253688361|ref|YP_003017551.1| exodeoxyribonuclease III [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754939|gb|ACT13015.1| exodeoxyribonuclease III [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 272

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 80/312 (25%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++VS+NIN L                 +    L    +    D++ LQE   ++ +
Sbjct: 2   AANMKVVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDDM 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +   + +           +         H  +A+  K   +  +        D+    
Sbjct: 46  FPLEDVSQY----------GYHVYYHGQKGHYGVALLCKAQPIAVRRGFPTDEDDA---- 91

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +            +++       F       +       ++  Q L+ ++ Q   
Sbjct: 92  -QRRIIMADFATEHGTFTIVN-----GYFPQGESRDHPVKFPAKTRFYQDLQTYLEQHHS 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
           +  P ++ GD N                          L    ++   +     +  F  
Sbjct: 146 ATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMARLQGWGLIDTFRA 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +         +           D      +
Sbjct: 206 ANPESNDRFSWFDYRSAGFDDNRGLRIDLILASNFLADRCVATGI-------DYDIRGME 258

Query: 291 RLSDHCPISIDY 302
           + SDH PI   +
Sbjct: 259 KPSDHAPIWAQF 270


>gi|115359939|ref|YP_777077.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
 gi|115285227|gb|ABI90743.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
          Length = 604

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 93/316 (29%), Gaps = 48/316 (15%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGMGGGFDDPNNRGAKNYQEFQRQEAKIVSALKALDADVIGLMEIQ 352

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         +       S  R+++    R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELSAVRQLAAKLGSNWRVVDPGTSRLGGDAITVAMIYDSRTVE------PVGRAS 406

Query: 135 DSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185
                  NR+ +         N + + +   HLKS    D+  +               +
Sbjct: 407 TLAIDDKNRQPLAQSFRRVGGNKQALTIAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A  L DW+       +    ++ GDFN             + ++         +   +
Sbjct: 467 RAAAKLADWLAGTPTGVAGQGTLLIGDFNSYTYEDPI-----RLLEARGYRNLVSRWIGA 521

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIK 286
              +         +D+ +        +       I  +E                     
Sbjct: 522 NAYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPLALQYTLAYKSTEQQKTYYA 581

Query: 287 SRGKRLSDHCPISIDY 302
               R SDH P+ ID 
Sbjct: 582 PDAYRSSDHDPVLIDI 597


>gi|71735024|ref|YP_274825.1| exonuclease III [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257487832|ref|ZP_05641873.1| exonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289625127|ref|ZP_06458081.1| exonuclease III [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289648704|ref|ZP_06480047.1| exonuclease III [Pseudomonas syringae pv. aesculi str. 2250]
 gi|71555577|gb|AAZ34788.1| exodeoxyribonuclease III [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320324615|gb|EFW80692.1| exonuclease III [Pseudomonas syringae pv. glycinea str. B076]
 gi|320328987|gb|EFW84986.1| exonuclease III [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330867998|gb|EGH02707.1| exonuclease III [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330880714|gb|EGH14863.1| exonuclease III [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330985313|gb|EGH83416.1| exonuclease III [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331008544|gb|EGH88600.1| exonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 270

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 82/312 (26%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++    + +         H  +A+  +N  +        G +     +  R
Sbjct: 41  ------QFPHAEVEALGYHVHFHGQKGHYGVALLSRNPPLALHK----GFEGDDEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + NG+ + +++       F       +        +  + L+  +     +  
Sbjct: 91  FIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLESHFSNEQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++ + +     +  F     
Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHLYP 205

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +        +            D      ++
Sbjct: 206 EVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++ +
Sbjct: 259 PSDHAPIWLELN 270


>gi|327480794|gb|AEA84104.1| exonuclease III [Pseudomonas stutzeri DSM 4166]
          Length = 270

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 88/312 (28%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE        + 
Sbjct: 1   MKIVSFNINGL----------------RARPHQLSAIIDKHQPDVIGLQE---TKVADEQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRAGN 142
           FP+       +    + +         H  +A+  +     + + +P  G +        
Sbjct: 42  FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLEVHKGFPSDGEESQKRFIWG 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A     + NG+ + V++       F       +       ++    L+  + Q+    
Sbjct: 95  RFA-----DANGQPVTVMN-----GYFPQGESRAHPVKFPAKTKFYADLQALLEQRFSPD 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
               + GDFN                        ++L    ++ + I        F    
Sbjct: 145 ESLALMGDFNISPQDCDIGIGEVNAKRWLRTGKCSFLPEEREWLERIKGWGLQDSFRTLN 204

Query: 242 DSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             IDY +     ++ +            D      +
Sbjct: 205 PKVVDRFSWFDYRSRGFEDEPRRGLRIDYILTTHALHERVTDCGV-------DYDIRAME 257

Query: 291 RLSDHCPISIDY 302
           + SDHCP+ I+ 
Sbjct: 258 KPSDHCPVWIEL 269


>gi|317969204|ref|ZP_07970594.1| exodeoxyribonuclease III [Synechococcus sp. CB0205]
          Length = 273

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 86/306 (28%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ SWN+N                   +    +  + +  + D++ LQE    + +   
Sbjct: 1   MRIASWNVN----------------SVRTRLDQVLAWLQTHEPDVLCLQETKVSDDL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          I +    S    +  +A+  +      Q        D+   +  +
Sbjct: 42  -------FPLQAFEQIGYHCAISGQKAYNGVALISREPLEDVQVGFDALLPDAGPLSEQK 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +  +++     + +L++++ +   L S +  Y        +    L+ ++  ++E   
Sbjct: 95  RVISGMLD----GVRILNLYVPNGSSLKSEKYHYK------LEWLACLQRYLAVQEEQGD 144

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P  + GDFN  +                            +     L    +  +     
Sbjct: 145 PLCMVGDFNIGLEDRDLPDPQRLSGTIMASDPERSALRAALAD--RLTDVFRVFEPGSGH 202

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  + +                  D       + SDH P+
Sbjct: 203 WSWWDYRSGAWDRDLGWRIDHIYLSEELLGCATGCVI-------DKQPRGNVQPSDHAPV 255

Query: 299 SIDYDF 304
            ++  +
Sbjct: 256 VVNLAW 261


>gi|239932761|ref|ZP_04689714.1| hypothetical protein SghaA1_31348 [Streptomyces ghanaensis ATCC
           14672]
          Length = 302

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 85/307 (27%), Gaps = 40/307 (13%)

Query: 7   LALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           L L    +P  A+ A+      + ++S+N+   S  E                 ++R   
Sbjct: 23  LPLASTALPPGAASAKERPDRPLEVMSFNLRFASAAE--------PHSWAVRRPVMRDLL 74

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +     ++  QE                  +  T R        +     T   V  +  
Sbjct: 75  RRERPHVIGTQEGLYPQLRDIEADLGPAYDWIGTGREGGSRDEFTAVLYDTQRLVPLEYD 134

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYS 178
                  P + A +++  A  R A  +        G++  VL+ HL +            
Sbjct: 135 HFWLSDTPDVIASNTWGNAFVRMATRVRFRDLRAGGREFHVLNTHLDN------------ 182

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRF 237
            +     ++A  L           VP V+ GDFN   +     D      +         
Sbjct: 183 -ASQYARERAAALIADRVGGLGRCVPVVVTGDFNVAAHENPVYDTLLGAGLVDTWEAAAE 241

Query: 238 PKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             E     +  +        ID+ ++             +    + +     G+  SDH 
Sbjct: 242 RGEPYGTFHGYRPPVPGGPRIDWILVTP---------GVTVHRASVNTFAPAGRFPSDHL 292

Query: 297 PISIDYD 303
           P+     
Sbjct: 293 PVQAALT 299


>gi|209885397|ref|YP_002289254.1| exodeoxyribonuclease III [Oligotropha carboxidovorans OM5]
 gi|209873593|gb|ACI93389.1| exodeoxyribonuclease III [Oligotropha carboxidovorans OM5]
          Length = 260

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 91/304 (29%), Gaps = 67/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  + K  + D+V LQE+     + + 
Sbjct: 1   MRIATWNVN----------------SVRQRLDHLVTWLKEREPDLVCLQEI---KCLDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+              ++           +A+  K      +        D  +R    
Sbjct: 42  FPREPLEAL-------GYNVVTHGQKTFNGVALLSKYRFEETRPQLAGDPDDLHARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V        +  ++L +   +++ +  Y  S          L  +  ++ +S  
Sbjct: 92  --LEGVVSHKDGTFRLACLYLPNGNPVNTEKYPYKLS------WMDRLITYARERIKSEE 143

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PFV+AGDFN                         D ++T+             D+     
Sbjct: 144 PFVLAGDFNVIPTPADVYNPQAWLGDALFLPQTRDKFQTLLNLGLTDALRATTDAPQQYT 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ +M   A   L            D      ++ SDH P+  
Sbjct: 204 FWDYQAGAWQKNNGIRIDHLLMSPPAADRLQAVGI-------DKHVRGWEKASDHVPVWA 256

Query: 301 DYDF 304
           D DF
Sbjct: 257 DLDF 260


>gi|320158919|ref|YP_004191297.1| putative phospholipase C [Vibrio vulnificus MO6-24/O]
 gi|319934231|gb|ADV89094.1| putative phospholipase C [Vibrio vulnificus MO6-24/O]
          Length = 442

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 87/291 (29%), Gaps = 36/291 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++++++NI  L                   + L+  Y K    D++ LQE+ +    A
Sbjct: 176 QHLKIMTYNIWALPAIASHIG---------ERFELIPDYVKGY--DVLALQEVFANGRDA 224

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +        + +     +             + +  +   V Q  +       +   A 
Sbjct: 225 FLRELAKEYPYQTKMLDKDGFNIFDG-----GVIIVSRYPIVNQAQFIFPDCTGTDCFAD 279

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +      V   G+   V   H  S+    + +           +Q + L   +     +
Sbjct: 280 -KGVNYAEVIKGGEAYHVFATHTASYDTDTARDYRQRQ-----FKQMRALAQSLK--IPA 331

Query: 202 LVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251
               V +GDFN     + G+       +   +    +    +S  +   N          
Sbjct: 332 NETVVYSGDFNVNKRKFPGDYQQMIANLSAIEPH--YSGYTESTFDPRINNFAGEPLSGG 389

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N   +DY ++           +  +I  +  +   +   LSDH P+S   
Sbjct: 390 ENVEYLDYVMVSNEYAVKGDNNNRVDIPRSTAESLWKHYNLSDHFPVSTVL 440


>gi|75910924|ref|YP_325220.1| endonuclease/exonuclease/phosphatase [Anabaena variabilis ATCC 29413]
 gi|75704649|gb|ABA24325.1| Endonuclease/exonuclease/phosphatase [Anabaena variabilis ATCC 29413]
          Length = 2346

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/331 (14%), Positives = 97/331 (29%), Gaps = 51/331 (15%)

Query: 15   PCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDA 66
              T  V   +++ S+N+ N  +     S + +  +R   +                 L+A
Sbjct: 1731 TTTPDVGGTLKVASFNVLNYFNGDGTGSGFTSPEQRGAENLTEFNRQRDKTIAAILGLNA 1790

Query: 67   DIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKN 120
            D+V L E+ +      +A+  +           T   IN        D I   +  +  +
Sbjct: 1791 DVVGLIEIENDGYGANSAIQDLVNGLNAVAGAGTYAFINPGLSQLGTDAIAVGLIYKPNS 1850

Query: 121  VR-VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKS-----FCFLDS 172
            V  +   +    G         NR+ +      N  G++   +  H KS         D+
Sbjct: 1851 VTPIGTAATVADGFGQGAFDNNNRKPLAQTFRQNSTGEQFTAVINHFKSKGSSFGNPGDA 1910

Query: 173  LENTYS-PSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                    S    ++ +Q L  W+       +   ++I GD N             + ++
Sbjct: 1911 DAGDGQGLSNGTRTRASQDLAAWLATNPTGTTDTDYLILGDLNAYAQEDPI-----RALE 1965

Query: 230  PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                    P        +         +D+ + + +    L       I  +E ++    
Sbjct: 1966 NAGYNNLLPN----TTYSYVFDGQWGALDHALANASLTAQLSGAVKWHINADEPNVLDYN 2021

Query: 290  -----------------KRLSDHCPISIDYD 303
                              R SDH P+ +  +
Sbjct: 2022 TNFKSVGQQTSLYSPDAFRSSDHDPVIVGLN 2052


>gi|217974553|ref|YP_002359304.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS223]
 gi|217499688|gb|ACK47881.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS223]
          Length = 870

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 103/378 (27%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66
             + +    +R+ S+N+       +G     +   R              +      ++A
Sbjct: 455 APSVATKGDLRVASFNVLNFFNDVDGGDTNPSGSNRGALTLEEMVLQRTKIVSAITAMNA 514

Query: 67  DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +     K               P+N +     T+      K    + I   
Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTPENAYSFVEITDADKYDGKYFGTDAITVG 574

Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                  + ++       +  + A  R ++    +I+ +
Sbjct: 575 MLYRGGKVTLAGAAQAIDTPEQHASAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 SLTVVVNHLKSKGSGCLEDWANFEESVDPADQQGKCNAFRVSAAKVLGETLKDVKGDLLI 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  DF+   +        W T+D                 +    K
Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSDRDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGAGTFSYSYNGELGNLDHALANASLAKRLVDIEDWHINSVESNLFEYGKKFSGDLAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ +   +
Sbjct: 815 ENAFSASDHDPVIVALSY 832


>gi|317404954|gb|EFV85317.1| exodeoxyribonuclease III [Achromobacter xylosoxidans C54]
          Length = 260

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 80/305 (26%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L+                     +  +      D++ +QE+   +     
Sbjct: 1   MKLATWNVNSLN----------------VRLPQVLDWLAANPVDVLCIQELKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  +   +    +    +  +A+  +          L   +D   R    
Sbjct: 41  ------KFPEAAFKEAGYHAVWAGQKTYNGVAIVSRVPGTSMVRN-LPTYEDPQQR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + L        + V+  +  +   + S +  Y        +    ++ W+  + +   
Sbjct: 90  -VLALTFPSADGDVRVVCAYCPNGQSVGSDKYAYK------LEWFAAMRAWLADEIKQYP 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GD+N                            + +        F +  +    + 
Sbjct: 143 RLAVLGDYNVAPADEDVHNPEKWEGQVLVSEPERQALRDLIDLGLADSF-RLFEQPEKSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++     K              D    R ++ SDH P+ 
Sbjct: 202 SWWDYRQFAFRRNAGLRIDHILLSPPLVKRCTACVI-------DKEPRRNEQPSDHAPVV 254

Query: 300 IDYDF 304
               F
Sbjct: 255 ATLTF 259


>gi|189463613|ref|ZP_03012398.1| hypothetical protein BACCOP_04337 [Bacteroides coprocola DSM 17136]
 gi|189429716|gb|EDU98700.1| hypothetical protein BACCOP_04337 [Bacteroides coprocola DSM 17136]
          Length = 342

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 91/338 (26%), Gaps = 47/338 (13%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSD 53
            +L     L        Q +R++ +N+  L +    SL  +S            KR    
Sbjct: 7   ILLGFAACLTASVCEAQQTLRVMEYNVENLFDCRHDSLKNDSEYLPHSVRGWSWKRYHEK 66

Query: 54  YTLLRQYA----KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
              + +      +    D+V L E+ +   +  +     +            +       
Sbjct: 67  LNRIAKVILAASREQVPDLVGLCEVENAYCLDGLV---KYSPLRDAAYRYVMTDSPDERG 123

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFC 168
           I  A+  +  + R++     +        R   R  + +    ++G  + V   H+ S  
Sbjct: 124 IDVALLYQPSSFRLI-SDQHIRIPSYKIGRKPTRDILHVTGRVVSGDTLDVFICHMPSRS 182

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--WK 226
             +     Y    + + + A      I Q        +I GDFN               K
Sbjct: 183 GGEKQSEPYRLLTARVLRHAADSVMKIRQ----TPYLIIIGDFNDYPESRSVCRTLGAGK 238

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS---------- 276
                DS   +      +    +       +D  +++          +            
Sbjct: 239 PEKDIDSYRLYNLMNGRQGGTYRYRGEWGILDQLILNGTFLNHTGNLTTEFNRARILTFP 298

Query: 277 -----------EILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +  +   +        SDH P+ +D D
Sbjct: 299 FLLEEDENYGGDKPFRTYNGMKYHGGYSDHLPVCVDID 336


>gi|254581358|ref|XP_002496664.1| ZYRO0D05302p [Zygosaccharomyces rouxii]
 gi|238939556|emb|CAR27731.1| ZYRO0D05302p [Zygosaccharomyces rouxii]
          Length = 857

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 86/327 (26%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+NI     +  +      +           L +   +   DIV LQE+ + 
Sbjct: 520 AKRSFTIMSYNILCQHYATPKMYRYTPSWALSWDHRRQRLTEEVMSYMTDIVCLQEVEAK 579

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       +  ++   ++  +      +
Sbjct: 580 TYEEHWAPLMLKQGYSGVFHAKTRAKTMHSKDSKKVDGCCVFYKESEFKLQFKDEVDFSS 639

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 640 TWMKHKKFQRTEDYLNRAMNKDNVVIYIKLNHLKSGESVWIATTHLHWDPQFNDVKTFQV 699

Query: 189 QWLKDWITQ-----------KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             L D + +           +     P +I GDFN + +           +  +  +   
Sbjct: 700 GILMDHLEELIKEHGSPSSRQDPKKSPVIICGDFNSQKDSAVYELLSTGHVQSHKDIDGR 759

Query: 238 PKEKDSRCN-------------------ANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
                S+ N                    N        IDY     Q      +     +
Sbjct: 760 DFGYMSQKNFAHNLSLKSGYGYIGELPLTNFTPSFTSTIDYIWFSTQALRIRGLLGEIDD 819

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH PI   ++F
Sbjct: 820 DYISKFIGFPNDKFPSDHIPILARFEF 846


>gi|160874973|ref|YP_001554289.1| PKD domain-containing protein [Shewanella baltica OS195]
 gi|160860495|gb|ABX49029.1| PKD domain containing protein [Shewanella baltica OS195]
 gi|315267207|gb|ADT94060.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS678]
          Length = 944

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 99/333 (29%), Gaps = 50/333 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67
           +  T      +++ S+N+      +G      + +              +      + AD
Sbjct: 450 IAPTLVEGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509

Query: 68  IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120
           +  L E+ +      +A+A +       +  +    I  +       + I   +  R   
Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGMNAIGTDAITVGLIYRSDK 569

Query: 121 V-------RVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167
           V        +   + PL    K  F  + NR  +     +NG +  + V   HLKS    
Sbjct: 570 VTPQGAARILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLKSKGSE 629

Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           C  D   N    +C+   ++ A     WI+++       ++ GD N              
Sbjct: 630 CAGDPDLNDGQGNCNITRTRAATAAGQWISEQYP-DQGVLLIGDLNAYAKEDP-----LT 683

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +        F K +     +         +D+ + +      ++  +   I  +E  + 
Sbjct: 684 ALGNAGFSELFAKLEKPNPYSYVFSAESGQLDHALANAALLDKVVDVTEWHINTDEPRVL 743

Query: 287 SRG-----------------KRLSDHCPISIDY 302
                                R SDH P+ I  
Sbjct: 744 DYNEEFKTPAQIQDLFATDAYRSSDHDPVVISL 776


>gi|270295490|ref|ZP_06201691.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274737|gb|EFA20598.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 254

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 75/286 (26%), Gaps = 43/286 (15%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N+      + V+ W               +       D++ +QE+            
Sbjct: 1   MTFNVRLDIPSDSVNNWNYRKGDA-------CRMIAYYSPDLLGMQEVLHNQMEDLKRGL 53

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             +            +         T      +         P       +  + NR   
Sbjct: 54  PQYTALGVGRDDGKEAGEYCPIFFRTDRFTLVEYGNFSLSEQPETIGIKGWDASYNRVTT 113

Query: 147 ELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
             ++  + NG+K    + HL      +  +        L+  + + +           +P
Sbjct: 114 WAILQEKNNGQKFVYFNTHL-----DNDGKTARKEGVQLILDKIKEIA--------PGMP 160

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-------KIPI 257
            +I GDFN             +T++             +   +             ++ +
Sbjct: 161 AIITGDFNCTPGEEP-----LQTLEKGGMENAAKTAAVTYGPSWSFHDFGRLPVEERVLL 215

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           DY  + +               Y     K     LSDHCPI ++  
Sbjct: 216 DYVFVTK---------GAKIDRYRVIQDKPENSYLSDHCPILVELT 252


>gi|218438570|ref|YP_002376899.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
 gi|218171298|gb|ACK70031.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
          Length = 285

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 104/308 (33%), Gaps = 45/308 (14%)

Query: 5   YVLALVFFLVPCTASV---AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
             LA+ F L  CT ++   A  + ++S+N+          +   + +    D   +R   
Sbjct: 12  ICLAICFTLASCTYALPMKAAPLTVMSYNVE------SDDINDTNPRLVAEDIERIR--- 62

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            N+  DI  L E+ +  A               T+ + +      +    T  A + + V
Sbjct: 63  SNMPIDIWGLSEVLNQEAAD-----------IFTDAISSPDTEYRSILGTTGGADQLQIV 111

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
               ++  L+  ++  +  G R  +    E+ G     L          +          
Sbjct: 112 Y-NPETVRLIDTQELRNSGGTRAPLVAHFELLGNGREFLFTVNHFNRGDED--------- 161

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFWKTIDPNDSLI---- 235
              +QQA++L++W     E  +P V  GD+N          N+ F   ++ +  +     
Sbjct: 162 -RRNQQARFLREW---GAEQTLPIVAVGDYNFDYDPQTQSGNEAFDIFLEDDTFIWIRPE 217

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                         N      +D+  + + A ++        +L +E   +   +  SDH
Sbjct: 218 CLADNSCPPTGTQCNPTYNSILDFVFVSERATQW--DNISDILLIDEPVCEKESRGYSDH 275

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 276 RPVVASFD 283


>gi|27367041|ref|NP_762568.1| putative phospholipase C [Vibrio vulnificus CMCP6]
 gi|27358609|gb|AAO07558.1| Putative phospholipase C [Vibrio vulnificus CMCP6]
          Length = 442

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 87/291 (29%), Gaps = 36/291 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++++++NI  L                   + L+  Y K    D++ LQE+ +    A
Sbjct: 176 QHLKIMTYNIWALPAIASHIG---------ERFELIPDYVKGY--DVLALQEVFANGRDA 224

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +        + +     +         I   I  R   V   Q  +P     D F+   
Sbjct: 225 FLRELAKEYPYQTKMLDKDGFNIYDGGVI---IVSRYPIVNQAQFVFPDCTGTDCFADK- 280

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   V   G+   V   H  S+    + +           +Q + L   +     +
Sbjct: 281 --GVNYAEVIKGGEAYHVFATHTASYDTDTARDYRQRQ-----FKQMRALAQSLK--IPA 331

Query: 202 LVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251
               V +GDFN     +  +       +   +    +    +S  +   N          
Sbjct: 332 NETVVYSGDFNVNKRKFPSDYQQMIANLSAIEPH--YSGYTESTFDPRINNFAGEPLSGG 389

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N   +DY ++           +  +I  +  +   +   LSDH P+S   
Sbjct: 390 ENVEYLDYVMVSNEYAVKGDNNNHVDIPRSTAESLWKHYNLSDHFPVSTVI 440


>gi|320160160|ref|YP_004173384.1| hypothetical protein ANT_07500 [Anaerolinea thermophila UNI-1]
 gi|319994013|dbj|BAJ62784.1| hypothetical protein ANT_07500 [Anaerolinea thermophila UNI-1]
          Length = 1278

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 89/329 (27%), Gaps = 48/329 (14%)

Query: 16  CTASVAQKVRLVSWNINTLS--------------EQEGVSLWKNSVKRTTSDYTLLRQYA 61
            +      +++ + N+                           +S    T     + +  
Sbjct: 617 VSTGENGTLKVAAMNVLNYFVTLDQTPYPAGSPYNTNNTPRGADSAAEFTRQQEQIVRAL 676

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPK----NTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             LDAD+V L E+ S+     V       NT+        + + +    N+ I  A+  +
Sbjct: 677 AGLDADVVGLIEIESWTGADAVNNLVNALNTYLGSTVYAAVPDPATGVGNDAIKVALIYK 736

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
              V  +  S     A     R     A     +  G+   V+  H KS     +     
Sbjct: 737 TATVERVGDSLSTGAAPFDLYRYPV--AQAFREKTTGEVFTVVINHFKSKSCSGTPTGGD 794

Query: 178 SP-------SCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINYLGNNDDFWKT 227
           +          +     +  L +WI             ++ GDFN              T
Sbjct: 795 ADLGEGAGCYNATRVAMSNTLLNWINNTLIPTTGDPDVIVMGDFNAYGAEAPIL-----T 849

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           ++    +    + +     +         +D+  +  +    +       I  +E  +  
Sbjct: 850 LENGGLVNMGKQYEGVNTYSYVFDGMAGALDHLFVTSSLADEVTGAGHWHINADEPSVID 909

Query: 288 RG-------------KRLSDHCPISIDYD 303
                           R SDH PI +  D
Sbjct: 910 YNTEFKTVDLYQPHPYRSSDHDPILVGLD 938


>gi|238788459|ref|ZP_04632252.1| Exodeoxyribonuclease III [Yersinia frederiksenii ATCC 33641]
 gi|238723372|gb|EEQ15019.1| Exodeoxyribonuclease III [Yersinia frederiksenii ATCC 33641]
          Length = 271

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 78/310 (25%), Gaps = 73/310 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ VS+NIN L                 +    L    +    D++ LQE         
Sbjct: 3   TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +FP               +         H  +A+  K   +  +       +D+      
Sbjct: 44  MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKQEPLAVRRGFPSDEEDA-----Q 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +   +      + V++       F       +        +    L+ ++ Q+  + 
Sbjct: 92  RRIIMADIATPQGTLTVIN-----GYFPQGESRDHPTKFPAKERFYADLQQYLEQQLSAD 146

Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
              +I GD N                          L     + + +     +  F    
Sbjct: 147 AQILIMGDLNISPTDLDIGIGEESRKRWLRTGKCSFLPEERAWLERLQSWGLVDTFRAAN 206

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  Q      I           D      ++ 
Sbjct: 207 PDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYKIRGMEKP 259

Query: 293 SDHCPISIDY 302
           SDH P+  ++
Sbjct: 260 SDHAPVWSEF 269


>gi|126174046|ref|YP_001050195.1| PKD domain-containing protein [Shewanella baltica OS155]
 gi|125997251|gb|ABN61326.1| PKD domain containing protein [Shewanella baltica OS155]
          Length = 944

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 100/333 (30%), Gaps = 50/333 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67
           +  T      +++ S+N+      +G      + +              +      + AD
Sbjct: 450 IAPTLVEGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509

Query: 68  IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120
           +  L E+ +      +A+A +       +  +    I  +       + I   +  R   
Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGMNAIGTDAITVGLIYRSDK 569

Query: 121 V-------RVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167
           V        +   + PL    K  F  + NR  +     +NG +  + V   HLKS    
Sbjct: 570 VTPQGAARILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLKSKGSE 629

Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           C  D   N    +C+   ++ A     WI+++       ++ GD N              
Sbjct: 630 CAGDPDLNDGQGNCNITRTRAATAAGQWISEQYP-DQGVLLIGDLNAYAKEDP-----LT 683

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +        F K + S   +         +D+ + +      ++  +   I  +E  + 
Sbjct: 684 ALGNAGFSELFAKLEKSNPYSYVFSAESGQLDHALANAALLDKVVDVTEWHINTDEPRVL 743

Query: 287 SRG-----------------KRLSDHCPISIDY 302
                                R SDH P+ I  
Sbjct: 744 DYNEEFKTPAQIQDLFATDAYRSSDHDPVVISL 776


>gi|254526744|ref|ZP_05138796.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9202]
 gi|221538168|gb|EEE40621.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9202]
          Length = 281

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 91/301 (30%), Gaps = 63/301 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   +  + +  +   ++ DI+ LQE      +   FP
Sbjct: 3   IATWNVN----------------SIRTRLSQIIDWINQVNPDILCLQE---TKVMDDSFP 43

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
              +         + ++        +  +A+  K      +     G  +        + 
Sbjct: 44  TEPF-------EKLGYAVEVYGQKSYNGVAIISKTKPENVKKG-FYGCTNFNQNIEIFQD 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + L+  +   I ++++++ +   L+S +  Y             L  ++ ++++     
Sbjct: 96  QKRLISADINNIKIINVYVPNGSSLESSKFEYK------INWLNCLGSFLDEQEKKGELI 149

Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPND-------SLIRFPKEKDSRCNANKNL 251
            + GDFN   + L  +D            I+ N         LI   +  +         
Sbjct: 150 CLLGDFNIAPSNLDIHDPKKYEGGIMASEIERNALNNVLKKRLIDSFRIFEQNTGHWSWW 209

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+  + +     L            D       R SDH P+ ID 
Sbjct: 210 DYRNNAFELNKGWRIDHIYISKELSSKLKSCVI-------DCSPRGYLRPSDHAPVMIDL 262

Query: 303 D 303
           +
Sbjct: 263 N 263


>gi|332880309|ref|ZP_08447987.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332681754|gb|EGJ54673.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 336

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 93/320 (29%), Gaps = 48/320 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLD----A 66
           Q  R++ +N+  L +    SL ++              R       L +    +      
Sbjct: 24  QPFRVMFYNVENLFDCRHDSLKEDREFLPDGEKKWTPSRYWRKLDALSKVVAAVGEERLP 83

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V L E+ + + +   F         +       +       I  A+  +  + R+L +
Sbjct: 84  DLVGLCEVENDSVL---FDLTRRSSLRALGYRYVATHSPDVRGIDVALLYQPGSFRLL-E 139

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           S+ +            R  + +  E+ +G  + VL  HL S      +   +    +   
Sbjct: 140 SHEIPVPSAEAGFRPTRNVLYVKGEVLSGDTLHVLVCHLPSRLGATRVSRRHRMLAART- 198

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              + + D +     S    +  GDFN  +      +  +                    
Sbjct: 199 --VRAVADSVRT-ATSDARILWMGDFNADVEDRVFREVVFPYFREPGLSPFCADGVRG-- 253

Query: 246 NANKNLRNKIPIDYFVMDQ----NAYKFLIQESFS-----------------EILYNEDD 284
            + +       ID+ ++      N+  F   +                       +    
Sbjct: 254 -SYRYRGIWETIDHILVSPVLMDNSRPFHTSDGCRAIVAFPFMCEREKTYGGVRPFRTYQ 312

Query: 285 IKSRGKRLSDHCPISIDYDF 304
                   SDH P+++D+++
Sbjct: 313 GPLYKGGYSDHFPVTLDFEW 332


>gi|163740897|ref|ZP_02148290.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161385888|gb|EDQ10264.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 339

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 106/335 (31%), Gaps = 49/335 (14%)

Query: 18  ASVAQKVRLVSWNINTL----SEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIV 69
           ++ A  +RLV++N+          + + +   +  R   D       L Q  K+LDAD +
Sbjct: 3   STDAVAMRLVTYNVEWFSSLFGADDRLLMDGGTSGRHGVDRDRQARALAQVFKHLDADGI 62

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQS- 127
            + E    N   K           +  R         ++     A     K +RV     
Sbjct: 63  MVIEAPDTNNRRKTLRALEHFAKEAGLRSTEAVIGFANDTQQEIAFLYDPKVLRVAHTPG 122

Query: 128 -------------YPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSL 173
                          L       +   ++  +EL V  NG ++I ++  HLKS     + 
Sbjct: 123 DSDEAPRFDGVFHIDLDVDAQKDAVRFSKPPLELTVTTNGGREISLIGAHLKSKAPHGAR 182

Query: 174 ENTYS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-- 226
              ++      +      QA WL+  + Q        ++ GD N           F +  
Sbjct: 183 SEDHAVTLSIANRRKQLAQAIWLRRRVEQLLAEGRDVMVMGDLNDGPGLDQYEQLFNRSS 242

Query: 227 --------TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYK----F 269
                     DPN   +  P+ +    +A              +DY ++     +    +
Sbjct: 243 VEIVMESDLYDPNAQSLLQPRLRVMPSSARFYDKANKRYFSALLDYIMVSSGLRQPAASW 302

Query: 270 LIQESFSEILYNEDDIKSRG-KRLSDHCPISIDYD 303
            I   F +    ED          SDH P+S+D D
Sbjct: 303 RIWHPFEDAACYEDVALREALLAASDHFPVSLDLD 337


>gi|148548014|ref|YP_001268116.1| exonuclease III [Pseudomonas putida F1]
 gi|148512072|gb|ABQ78932.1| Exodeoxyribonuclease III [Pseudomonas putida F1]
          Length = 270

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 82/313 (26%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V +NIN L                 +    L    +    D++ LQE    +     
Sbjct: 1   MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+  +   +          +D+      R
Sbjct: 41  ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLHKGFATDEEDA-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     + NG  I +++       F       +        +    L+  +  +  + 
Sbjct: 90  RFIWGTFADANGSPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFRND 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            P ++ GD N                        ++L    ++ + +     +  F    
Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +  Q     +            D      +
Sbjct: 205 PEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQPLVPRIKAAGV-------DYELRGME 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI ++  
Sbjct: 258 KPSDHAPIWLELS 270


>gi|148825679|ref|YP_001290432.1| exonuclease III [Haemophilus influenzae PittEE]
 gi|148715839|gb|ABQ98049.1| exodeoxyribonuclease III [Haemophilus influenzae PittEE]
          Length = 267

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K      +       +D+  R  
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQEPKAVRRGFSTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V++       F      T+        +    L+ ++ ++ + 
Sbjct: 91  ---IIMADLETEFGLLTVIN-----GYFPQGESRTHETKFPAKEKFYADLQQYLEKEHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L     +++ +        F K 
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ Q   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|313148526|ref|ZP_07810719.1| endonuclease/exonuclease/phosphatase family [Bacteroides fragilis
           3_1_12]
 gi|313137293|gb|EFR54653.1| endonuclease/exonuclease/phosphatase family [Bacteroides fragilis
           3_1_12]
          Length = 365

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/349 (12%), Positives = 91/349 (26%), Gaps = 57/349 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSV-----------K 48
           M+R + L L+       ++  Q   R+V WN     +    SL  +              
Sbjct: 22  MLRLFFLLLISSTSLFLSAQNQPPFRVVFWNTENFFDTRHDSLKNDREFLPHSLRHWGYS 81

Query: 49  RTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
           R       + +    +       ++ L E+ +   +  +     +      +     +  
Sbjct: 82  RYKKKIDNVARTLAAVGEWNFPVLIGLCEVENDTVMRDL---TLYSPLKEADYRYVMTHS 138

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIH 163
                I  A+  ++   ++L  +   +   +  +    R  + +  + + G  + VL  H
Sbjct: 139 SDQRGIDVALLYQRDRFKLL--TCSSIPVGNFENHRPTRDILHVSGLLLTGDTLDVLVAH 196

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNN 221
           L S             S       AQ LK+              +I GDFN         
Sbjct: 197 LPSRSGG------ARQSEPYRLFAAQKLKNAADSLMCVRRSAKLIIMGDFNDYPTDKSVK 250

Query: 222 DDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                     +            K K+    + K       +D+ ++             
Sbjct: 251 QVLKALSPEENPDHKQLYHLLARKAKNRNFGSYKYQGEWGLLDHLIVSGTLLDTSGTLFT 310

Query: 276 SEI---------------------LYNEDDIKSRGKRLSDHCPISIDYD 303
            E                       +            SDH P+  D++
Sbjct: 311 EEKKASVLRLPFLLIKDEKYGGMQPFRTYIGMKYQGGYSDHLPVYTDFE 359


>gi|188591189|ref|YP_001795789.1| metal dependent endonuclease/phosphatase [Cupriavidus taiwanensis
           LMG 19424]
 gi|170938083|emb|CAP63067.1| putative metal dependent endonuclease/phosphatase [Cupriavidus
           taiwanensis LMG 19424]
          Length = 260

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 99/286 (34%), Gaps = 51/286 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78
           K+R+V++NI+             +          +R     +DADIVFLQE+   N    
Sbjct: 2   KLRVVTYNIH----------KGVTGIARRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLV 51

Query: 79  AVAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           A A   P++T   + +        + +    +  H   A+  ++  ++ ++  +     S
Sbjct: 52  AAALFDPEHTQLNYLATDAYPHSVYGRNAVYDYGHHGNAILSRHPILMSENLDI-----S 106

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R   R  +  + +++G +  ++ +H   F                 ++QA+ L + + 
Sbjct: 107 DHRFEQRGLLHAVADVHGVETHLICVHFGLF-------------ARSRARQAEALVERVK 153

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               + VP VIAGDFN   +           I      +     + +R +   +      
Sbjct: 154 NVVPADVPLVIAGDFNDWNHR------LDAQICNTLGAVEASHARGARLHTFPSHMPWWQ 207

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +              EI            + SDH P+  + 
Sbjct: 208 LDRIYVRG-----------YEIERAHALTGRDWAQRSDHVPLVAEL 242


>gi|319896463|ref|YP_004134656.1| exodeoxyribonuclease iii [Haemophilus influenzae F3031]
 gi|317431965|emb|CBY80313.1| exodeoxyribonuclease III [Haemophilus influenzae F3031]
          Length = 267

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 87/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K    + +         + +   
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVVRR-----GFPTDNEGA 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +R +   +E     + V++       F       +        +    L+ ++ ++ + 
Sbjct: 88  QKRIIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L     +++ +        F K 
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ +   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSRKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|182414371|ref|YP_001819437.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
 gi|177841585|gb|ACB75837.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
          Length = 257

 Score =  102 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 96/288 (33%), Gaps = 44/288 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VRLV++NI        +     + ++  ++   + +    L  D+V LQE+   +  A  
Sbjct: 4   VRLVTFNIAHGRGLAPIQGLT-TPQKLKANLRKIARLIGELKPDVVALQEVDERSLWAGN 62

Query: 84  FPKNTWCIFYSTERL---INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           F    +   ++         H++R    ++    A+  +      ++           R 
Sbjct: 63  FDHLEYLRLHAGFEHAVFGIHNRRAGLLNLSYGNALLSRYPISYSETVVF-----GQRRV 117

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G +  +   +++ G+ + ++++HL               S     +Q   L  W+ +K+E
Sbjct: 118 GEKGFLFAEIDVAGRVMPLVNVHLHF------------SSREHRIRQIGRLLAWLREKQE 165

Query: 201 SLV-----PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                   P ++ GD N               +      +  P +         +     
Sbjct: 166 HSRGRWRVPAIVCGDLNNPGTSADATAALLSHLSDYGEYVLHPTKG----RTFPSPLPGR 221

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +D+  +           S  EI+            LSDH P+++D+ 
Sbjct: 222 LLDFVFLPGA-----CNASHCEIVRC---------FLSDHRPVAVDFT 255


>gi|325982581|ref|YP_004294983.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212]
 gi|325532100|gb|ADZ26821.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212]
          Length = 261

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 86/302 (28%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L                      +  +      D++ LQE+       K+
Sbjct: 3   MKLATWNVNSL----------------KVRLPQVIDWLVAHQPDVLCLQEI-------KL 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +N      +  +   +    +    +  +A+  K      +    +           +
Sbjct: 40  INEN---FPINEIKAAGYESVFAGQKTYNGVAILSK------RQGSNIVTAIPGLADEQK 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +          + V+  ++ +   ++S +  Y                W+ Q+     
Sbjct: 91  RVIAATY----GDLRVICAYVPNGENVESEKYEYK------LCWLPAFTQWLKQELIDYK 140

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
              + GDFN         D      K +             N  L    +  +    +  
Sbjct: 141 RLAVLGDFNIAPEDRDVYDAELWKGKVLCSEPERSAFGNMLNLGLADSFRLFEQPEKSYT 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++ +      +  +        D    + +R SDH P+ +
Sbjct: 201 WWDYRMLAFRRNQGLRIDHILLSEELCNACVTCAI-------DKTMRKLERPSDHAPVLV 253

Query: 301 DY 302
           + 
Sbjct: 254 EL 255


>gi|318042025|ref|ZP_07973981.1| exodeoxyribonuclease III [Synechococcus sp. CB0101]
          Length = 276

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 92/307 (29%), Gaps = 69/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ SWN+N                   +    +  + +    D++ LQE        ++
Sbjct: 1   MRIASWNVN----------------SVRTRLDQVLAWLETEQPDVLCLQE---TKVADQL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKDSFSRA 140
           FP        +    + +    S    +  +A+  +      Q   S  L    D+   +
Sbjct: 42  FPS-------AAFEQMGYHCAISGQKAYNGVALISRLPLDDVQIGFSALLPDDPDAPELS 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +R +  LV+     + VL++++ +   L S + TY  +          LK ++  + +
Sbjct: 95  EQKRVISALVD----GVRVLNLYVPNGSSLSSDKYTYKLA------WLACLKRYLAVQHD 144

Query: 201 SLVPFVIAGDFNRKINYLGNND------------DFWKTIDPN--DSLIRFPKEKDSRCN 246
              P  + GDFN        +D               + +       L    +  +    
Sbjct: 145 QGDPLCMVGDFNIGPEARDLHDPDRLSGGIMATDAERQALSDALAGRLTDVFRVFEPGSG 204

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  + +                  D       + SDH P
Sbjct: 205 HWSWWDYRSGAWDRDQGWRIDHIYLSEELLDCATGCVI-------DKTPRGNTQPSDHAP 257

Query: 298 ISIDYDF 304
           + ++  +
Sbjct: 258 VVVNLAW 264


>gi|149911488|ref|ZP_01900104.1| putative phospholipase C precursor [Moritella sp. PE36]
 gi|149805452|gb|EDM65460.1| putative phospholipase C precursor [Moritella sp. PE36]
          Length = 429

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 92/293 (31%), Gaps = 34/293 (11%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + A  ++++S+N+  L                   +  + ++ K    D++ LQE+ +  
Sbjct: 161 ADADTLKVMSYNVWALPVIAKHIGD---------RFQEIPKHLKGY--DVLMLQEVFASG 209

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                F ++    +    +++++   +  +     I  R   V   Q  YP     D F+
Sbjct: 210 --RDAFLRDLAKEYPYQTKMLDYPGINVYDGG-VTIVSRYPIVNEGQYVYPDCSGTDCFA 266

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-Q 197
                      V  NGK   V   H  SF    + +            Q + ++D+   Q
Sbjct: 267 DK---GVNYAEVIKNGKAYHVFATHTASFDTDTARDYRQR--------QFRQMRDFAQAQ 315

Query: 198 KKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254
                   V  GDFN   + +  +    +  +  ++       E       N    N   
Sbjct: 316 NIPVTDTVVYGGDFNVNKLKFPTDYQQMFANLSADEPQYAGYTESTFDPRINAYAGNALS 375

Query: 255 -----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +DY V+     K     +  +I         +   LSDH P+    
Sbjct: 376 GGENIEYLDYVVVSNEFAKRNENINTVKIPRTTVASLWKHWNLSDHFPVKAVI 428


>gi|227326084|ref|ZP_03830108.1| exonuclease III [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
          Length = 268

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 80/310 (25%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE   ++ +  +
Sbjct: 1   MKVVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDDMFPL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +           +         H  +A+  K   +  +        D+      R
Sbjct: 45  EDVGQY----------GYHVYYHGQKGHYGVALLCKEQPIAVRRGFPTDEDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +          + V++       F       +       ++  Q L+ ++ Q   +  
Sbjct: 90  RIIMADFATEHGTLTVVN-----GYFPQGESRDHPVKFPAKTRFYQDLQTYLEQHHSATQ 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                          L    ++   +     +  F     
Sbjct: 145 PLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMARLQDWGLIDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  +           D      ++ S
Sbjct: 205 DSNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAERCVATGI-------DYDIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 258 DHAPIWAQFS 267


>gi|310799683|gb|EFQ34576.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 307

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 89/307 (28%), Gaps = 16/307 (5%)

Query: 2   IRKYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           ++  + A +       A  + +  +RL+++NI   +             R       L  
Sbjct: 1   MKASMTAAMLLGAAGVACQTTSLTLRLMTYNIRW-ATPVAGPNEAYWSTRRPRLTAQLNY 59

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                   ++ +QE+     +         W            +   S            
Sbjct: 60  ETAGRPESLLCMQEVVEQQLLDIAQDLGPAWAHVGVGRDDGAAAGEFSPIFYRPDTWDLV 119

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +N        P +     +  A  R A           + ++ +      F    +    
Sbjct: 120 ENRTYWLSETPDVPGSRGWDAALPRIATVASFRHAATGLPLVYMCTH---FDHEGQTARE 176

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S  LL + A+   +  +  +++ VP  + GD N + +         +    + S +   
Sbjct: 177 RSAELLVRLAKG-WESGSGPEDTAVPVFLGGDLNVEPDNAAYKTLVAEGNLRDASDVVPE 235

Query: 239 KEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             +               + + ID+  +   A + +   S + +    DD       +SD
Sbjct: 236 AHRTGHSKTYTAFTDVDWDDMLIDHLFVRDPAARGIKFLSHAVLPNRFDDRL----FISD 291

Query: 295 HCPISID 301
           H P+ +D
Sbjct: 292 HRPVVLD 298


>gi|293392089|ref|ZP_06636423.1| exonuclease III [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952623|gb|EFE02742.1| exonuclease III [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 267

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 89/309 (28%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L +       D++ LQE+       +V
Sbjct: 1   MKIMSFNINGL----------------RARPHQLEEIIHKYQPDVLGLQEI---KVADEV 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +           + +         H  +A+  K V +  +       +++  R    
Sbjct: 42  FPYDL-------VDHLGYHVNHFGQKGHYGVALLSKQVPLSVRKGFPTDDEEAQKR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + +E    ++ V++       F       +        +    L+ ++ Q   +  
Sbjct: 91  -IIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N   +                      L    ++++ +        F     
Sbjct: 145 PVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRHMNP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID+ + ++      +                   + S
Sbjct: 205 TVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI-------ALDIRAMNKPS 257

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 258 DHAPIWAEF 266


>gi|238797343|ref|ZP_04640843.1| Exodeoxyribonuclease III [Yersinia mollaretii ATCC 43969]
 gi|238718774|gb|EEQ10590.1| Exodeoxyribonuclease III [Yersinia mollaretii ATCC 43969]
          Length = 271

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 78/310 (25%), Gaps = 73/310 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ VS+NIN L                 +    L    +    D++ LQE         
Sbjct: 3   TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +FP               +         H  +A+  K   +  +       +D+      
Sbjct: 44  MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKEKPLAVRRGFPTDEEDA-----Q 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +   +      + V++       F       +        +    L+ ++ Q+  + 
Sbjct: 92  RRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLSAD 146

Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
              +I GD N                          L     + + +     +  F    
Sbjct: 147 SQVLIMGDINISPTDLDIGIGEENRKRWLRTGKCSFLPEERAWLERLQSWGLVDTFRAAN 206

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  Q      I           D      ++ 
Sbjct: 207 PDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYEIRGMEKP 259

Query: 293 SDHCPISIDY 302
           SDH P+  ++
Sbjct: 260 SDHAPVWSEF 269


>gi|313499091|gb|ADR60457.1| Exonuclease III [Pseudomonas putida BIRD-1]
          Length = 270

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 82/313 (26%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V +NIN L                 +    L    +    D++ LQE    +     
Sbjct: 1   MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+  +   +          +D+      R
Sbjct: 41  ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLHKGFATDEEDA-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     + +G  I +++       F       +        +    L+  +  +  + 
Sbjct: 90  RFIWGTFADADGSPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFRND 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            P ++ GD N                        ++L    ++ + +     +  F    
Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +  Q     +            D      +
Sbjct: 205 PEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQLVPRIKAAGV-------DYELRGME 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI ++  
Sbjct: 258 KPSDHAPIWLELS 270


>gi|332670164|ref|YP_004453172.1| 5'-Nucleotidase domain-containing protein [Cellulomonas fimi ATCC
           484]
 gi|332339202|gb|AEE45785.1| 5'-Nucleotidase domain-containing protein [Cellulomonas fimi ATCC
           484]
          Length = 1651

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 50/348 (14%), Positives = 96/348 (27%), Gaps = 64/348 (18%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQ----------------EGVSLWKNSVKRTTSDYT-- 55
                 V   V++ S+N+                      + V++ +    R   D    
Sbjct: 478 TASPTDVGGDVQVASFNVLNYFTTLGADTAGCVPYRDRTGDPVTVDEGCDPRGAWDPEDL 537

Query: 56  -----LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--- 107
                 +      LDAD+V L E+ +   V  V  +    +  +                
Sbjct: 538 ARQQAKIVAAINALDADVVGLLEIENSAVVDGVADEALGTLVAALNAQAGAGTWAFVPSS 597

Query: 108 ---------NDIHTAIAVRKKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVEI--NGK 155
                    + I  A+  R   V     +  L   + D  + A  R  +         G+
Sbjct: 598 VDLPDVALQDSITNALIYRTAAVERTGDARALGSQSADGQAFANAREPIAQAFTPVGGGE 657

Query: 156 KIWVLDIHLKS-----FCFLDSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVIAG 209
            + V+  HLKS         D+       + +    +QA  L+DW+   +       + G
Sbjct: 658 PVLVVVNHLKSKGSAGPWPGDADAGDGQGASNESRVRQATALRDWVPTIQGDTEAVALVG 717

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           DFN             + +     +    +    +  +         +D+ ++++ A   
Sbjct: 718 DFNAYTREDP-----LQVLYDAGYVDAVQQLAPGQ-WSYTFSGLSGSLDHVLLNEAALAR 771

Query: 270 LIQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303
                  EI   E                      R SDH P+ +   
Sbjct: 772 ATGADVWEINAEESIALEYSRYNYHGTLFYADDVYRSSDHDPVVVGLT 819


>gi|1944175|dbj|BAA19649.1| exonuclease III [Aggregatibacter actinomycetemcomitans]
          Length = 267

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 89/309 (28%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L +       D++ LQE+       +V
Sbjct: 1   MKIMSFNINGL----------------RARPHQLEEIINKYQPDVLGLQEI---KVSDEV 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +           + +         H  +A+  K V +  +       +++  R    
Sbjct: 42  FPYDL-------VDHLGYHVNHFGQKGHYGVALLSKQVPLSVRKGFPTDDEEAQKR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + +E    ++ V++       F       +        +    L+ ++ Q   +  
Sbjct: 91  -IIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N   +                      L    ++++ +        F     
Sbjct: 145 PVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRHMNP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID+ + ++      +                   + S
Sbjct: 205 TVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI-------ALDIRAMNKPS 257

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 258 DHAPIWAEF 266


>gi|170739229|ref|YP_001767884.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
 gi|168193503|gb|ACA15450.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
          Length = 257

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 77/280 (27%), Gaps = 40/280 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+++N+      +G                 +     +   D+V LQE+      +  
Sbjct: 2   LRLITYNVRRCLGTDGTLSP-----------ARIAAVLASCRPDVVALQELDVGRPRSGR 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +   R   H+      +     A+       L ++  L G          R
Sbjct: 51  IDQAHAIAEHLGMRAHFHAALRV-MEEAYGNAILTALPSRLVRAEALPGLAGRPH-LEPR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+   +E  G ++ V+  HL       + +         L                   
Sbjct: 109 GALWAAIEAGGTEVQVIATHLGLRRRERARQAEALLGPRFL------------ADPGCRP 156

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+ GD N             + +         P+ +        +    + +D+  + 
Sbjct: 157 PLVLVGDLNAVPASAAYRR-LARHLRDAQRAAGVPRRQ----RTFPSGFPLLRLDHVFVS 211

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +      +          E       +  SDH P+ +D D
Sbjct: 212 EGIRVRHV----------EVVRGPLARVASDHLPLLVDLD 241


>gi|221068931|ref|ZP_03545036.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1]
 gi|220713954|gb|EED69322.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1]
          Length = 254

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 90/293 (30%), Gaps = 53/293 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            T    Q +R+ ++NI+           +        +   L    + LDADIV LQE+ 
Sbjct: 7   STPPEPQILRVATYNIH--------KGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVR 58

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYP 129
             N   + +  + W      E L                D     A+  +   +  Q   
Sbjct: 59  KMNRKEEQY-FDRWPNVPQAEYLAPEGYESVYLTNAYTRDGEHGNALLSRWPVIGYQH-- 115

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                 S  R   R  + + ++I+GK++  + +HL                     +Q  
Sbjct: 116 ---EDISDHRFEQRGLLHVELDIHGKRVHSIVVHLGLIPGS-------------RVRQIA 159

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L+ +I ++     P V+AGDFN         D   +          F  E+        
Sbjct: 160 LLQRFIEREVPPNAPLVVAGDFN---------DWGNQIKRMLAGFGLFEYEETQGILTYP 210

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +      +D+  +       L                    R+SDH P+  ++
Sbjct: 211 SRLPIAQLDHIYVRG-----LTPLGLQV------PKGRIWWRMSDHLPLIAEF 252


>gi|319900045|ref|YP_004159773.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319415076|gb|ADV42187.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 295

 Score =  101 bits (252), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 97/323 (30%), Gaps = 61/323 (18%)

Query: 1   MIRKYV-LALVFFLVPC-------TASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKR 49
           M ++   L   F L+ C       + +           S+NI   + ++ V+ W N    
Sbjct: 7   MKKQLYSLLFFFVLLSCGGEGFAMSPAKGDGKTTFVAASFNIRMDTPKDSVNAWPNRK-- 64

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                 L++   +  D DI  +QE   +  +  +   N +             +  ++  
Sbjct: 65  -----ELVKALVRFHDFDIFGVQEAFRHQ-LDGILELNEYAGI-------GEGRDGNDEG 111

Query: 110 IHTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLD 161
            H+AI  +K    +L +        P        +   NR       + N  GK+ +  +
Sbjct: 112 EHSAIIYKKSRFTLLDKGDFWYSETPDRIGLGWDATCCNRICSWGKFKENKTGKEFYFFN 171

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            H     F          S  LL ++ + +            P    GD+N   +     
Sbjct: 172 SH-----FDHQGVVARRESSKLLLKKIREIA--------GNTPAFSTGDYNATPDSEPIR 218

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSE 277
                 +   DS     +         +  +     +  IDY  + +             
Sbjct: 219 IIVSDGL-LKDSYTLSEQAPYGTVGTYQGFKRLANSQSRIDYVFVTKE---------VRI 268

Query: 278 ILYNEDDIKSRGKRLSDHCPISI 300
           + Y   +    GK  SDH P+ +
Sbjct: 269 LKYGTLNEVPNGKFPSDHFPVMV 291


>gi|323494242|ref|ZP_08099354.1| hypothetical protein VIBR0546_06792 [Vibrio brasiliensis LMG 20546]
 gi|323311405|gb|EGA64557.1| hypothetical protein VIBR0546_06792 [Vibrio brasiliensis LMG 20546]
          Length = 316

 Score =  101 bits (252), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 52/311 (16%), Positives = 109/311 (35%), Gaps = 29/311 (9%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + +   + N+    E  G      +    +         +Q    LDAD+V LQE+ S  
Sbjct: 5   KTLSFATANLFNFVEPPGAFYDFENIYEREAWQEKCRWTQQQLSQLDADVVGLQEVFSIE 64

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--LLGAKDS 136
           A  ++  +  +   ++T       +    +    AIA R     +   + P  +     +
Sbjct: 65  ATRELMAQIGYP-HFATVDSPAIEQEYIYSKPVVAIASRYPISHISPVTPPKEMSQGYQT 123

Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------YSPSCSLLSQQA 188
              + +R+ ++ ++++    ++ V   HLKS    +SLE            S      +A
Sbjct: 124 QLPSFSRQPIQAIIDVPDIGEVAVYVCHLKSQRATESLEAELEQPLIGRWLSAQQRGWEA 183

Query: 189 QWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--------IDPNDSLIRFPK 239
             L+ +I  Q +   +P V+ GDFN+ I+         +         +  +  L +   
Sbjct: 184 LMLRLFIQQQYQTHPIPTVLMGDFNQAISSDITGLLTQEVELQGNPLMLKDSWRLFQLTH 243

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN------EDDIKSRGKRLS 293
               R   + +      +DY ++ Q  +            Y        +    + K+ S
Sbjct: 244 PDAERQPTHYHFATGNILDYILLSQEFHPDSQYSLADVTDYRALDKHLINPSFEQDKQAS 303

Query: 294 DHCPISIDYDF 304
           DH  +++   F
Sbjct: 304 DHAFVAVTVRF 314


>gi|145641817|ref|ZP_01797392.1| exodeoxyribonuclease III [Haemophilus influenzae R3021]
 gi|145273439|gb|EDK13310.1| exodeoxyribonuclease III [Haemophilus influenzae 22.4-21]
          Length = 267

 Score =  101 bits (252), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K    + +       +D+  R  
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVIRRGFPTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + +++       F       +        +    L+ ++ ++ + 
Sbjct: 91  ---IIMADLETEFGLLTIIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L     +++ +        F K 
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ Q   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|332828522|gb|EGK01222.1| hypothetical protein HMPREF9455_02414 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 263

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 92/314 (29%), Gaps = 66/314 (21%)

Query: 1   MIRKY---VLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M + +   V  L+         +AQ   +++++ +N+                    +  
Sbjct: 1   MKKIFNFRVYILIILSFSAVNLLAQDKVQLKVLCYNLRFG---------------ELASL 45

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN----HSKRDSNNDI 110
               ++ K  + DIV LQE+       +   +N                 + +       
Sbjct: 46  EEFAEFIKKENPDIVALQEVDVNTLRTRAPHQNGKNFISELAFRTGMLSLYGRTIDYAGG 105

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCF 169
           +  I +  K      Q   L   +        R  +  +VE++ GK I     HL     
Sbjct: 106 YYGIGILSKYPISQSQRIFLPMPE---GAKERRALLTGVVELSEGKSITFACTHLDYTTS 162

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                       ++   Q  ++   + + +    P ++ GDFN + +     +     + 
Sbjct: 163 ------------AVRRAQVDFINQQLMKIE---TPVILCGDFNARPDSDEIANGMKNWM- 206

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                     +      +      K  IDY      +  +   +S++ +           
Sbjct: 207 -----QVSTMDFTIPAKS-----PKSKIDYIFCYPASNVWKTVDSYTPVT---------- 246

Query: 290 KRLSDHCPISIDYD 303
            +LSDH PI     
Sbjct: 247 -QLSDHLPIITTLT 259


>gi|332828694|gb|EGK01386.1| hypothetical protein HMPREF9455_02219 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 305

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/321 (11%), Positives = 80/321 (24%), Gaps = 44/321 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +   VF  +  +   AQ + + S+NI   ++ +                 ++ +  
Sbjct: 1   MKKTISLSVFVFLCVSFIYAQDLVVGSYNIRYNNQGDAEKGNG-----WQRRCPVITKLI 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              D DI+  QE+              +            +   +       I  +K   
Sbjct: 56  SFNDFDILGTQEVLHNQLEDLQRELPQYGYVGVGRDDGKTAGEYAP------IFYKKDRF 109

Query: 122 RVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            +L+  +  +  +  F   G      R       +   KK  +   +L            
Sbjct: 110 ELLKSGHFWMAEQTDFPNKGWDAALPRICTWAQFKDRKKKKKIWFFNLHMDHVG------ 163

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                      AQ +   I +        ++ GDFN    +          I  +     
Sbjct: 164 ----VEARRHSAQLVLKKIEEMCGKDA-VILTGDFNVDQTHESYKLLANSNILFDSYEKA 218

Query: 237 FPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQE---------------SFSEIL 279
             +   +               ID+  +                             +  
Sbjct: 219 GVRYALNGTFNAFKPNLMTNSRIDHIFVSGKFEVDRYGVLTDTYRVPVENSKELHVGDFP 278

Query: 280 YNEDDIKSRGKRLSDHCPISI 300
                 ++  +  SDH P+ +
Sbjct: 279 KEVFSTEAETRLPSDHYPVKV 299


>gi|261868358|ref|YP_003256280.1| exonuclease III [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|3132266|dbj|BAA28143.1| deoxynuclease [Actinobacillus actinomycetemcomitans]
 gi|261413690|gb|ACX83061.1| exodeoxyribonuclease III [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 267

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 88/309 (28%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L +       D++ LQE+       +V
Sbjct: 1   MKIMSFNINGL----------------RARPHQLEEIINKYQPDVLGLQEI---KVADEV 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +           + +         H  +A+  K   +  +       +++  R    
Sbjct: 42  FPYDL-------VDHLGYHVNHFGQKGHYGVALLSKQAPLSVRKGFPTDDEEAQKR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + +E    ++ V++       F       +        +    L+ ++ Q   +  
Sbjct: 91  -IIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N   +                      L    ++++ +        F     
Sbjct: 145 PVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRHMNP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID+ + ++      +                   + S
Sbjct: 205 TVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI-------ALDIRAMNKPS 257

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 258 DHAPIWAEF 266


>gi|170721574|ref|YP_001749262.1| exonuclease III [Pseudomonas putida W619]
 gi|169759577|gb|ACA72893.1| exodeoxyribonuclease III [Pseudomonas putida W619]
          Length = 270

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 83/313 (26%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V +NIN L                 +    L    +    D++ LQE    +     
Sbjct: 1   MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+  +   +          +D+      R
Sbjct: 41  ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLFKGFATDEEDA-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     + NG  I +++       F       +        +    L+  +  + +  
Sbjct: 90  RFIWGTFADANGTPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLEGQFKQD 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            P ++ GD N                        ++L    ++ + +     +  F    
Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLH 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +  Q+    +            D      +
Sbjct: 205 PEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQHLVPRIKAAGV-------DYELRAME 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI ++  
Sbjct: 258 KPSDHAPIWLELS 270


>gi|332293386|ref|YP_004431995.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
            4H-3-7-5]
 gi|332171472|gb|AEE20727.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
            4H-3-7-5]
          Length = 1548

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 96/309 (31%), Gaps = 37/309 (11%)

Query: 22   QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
                +V+WNI    ++                   +R   + LDAD++ ++E+      A
Sbjct: 960  DSFDVVAWNIEWFGDENNAP-PAGRPMSDEIQRDSVRTVLRRLDADVIAVEEIADDILFA 1018

Query: 82   KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------YPLLGAKD 135
            ++        +  ++ + N +              +   V +++        +PL    D
Sbjct: 1019 ELVDGLEGYDYILSDAVSNPTGTPPF--QKLGFIYKTATVNLVKTQALLATIHPLYNGGD 1076

Query: 136  S-------------FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                          ++       +   V ING    +  I L +     +          
Sbjct: 1077 DSALVDYPSTTDRFYASGRLPFLMTADVTINGTTEQIDLIALHARA---NGSTQSQNRYD 1133

Query: 183  LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIR 236
            +     + LKD +   + S    ++ GD+N  ++             F   +  +++   
Sbjct: 1134 MRRYDVEVLKDSLD-VQFSDRKIILLGDYNDDVDETVADEVPTTESSFIAYVQDSENYNV 1192

Query: 237  FPK-EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                  D+   +  +  N   ID+  +    +   I+ S S      D+        SDH
Sbjct: 1193 VTSVLSDAGFRSFVSRENM--IDHIAITDELFDNYIESSASVGYQFYDE--DYAFTASDH 1248

Query: 296  CPISIDYDF 304
             P+S  + F
Sbjct: 1249 FPVSARFIF 1257


>gi|227111460|ref|ZP_03825116.1| exonuclease III [Pectobacterium carotovorum subsp. brasiliensis
           PBR1692]
          Length = 268

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 81/310 (26%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE   ++ +  +
Sbjct: 1   MKVVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQETKVHDDMFPL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +           +         H  +A+  K   +  +        D+      R
Sbjct: 45  EDVSQY----------GYHVYYHGQKGHYGVALLCKTQPIAVRRGFPTDEDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +          + V++       F       +       ++  Q L+ ++ Q   +  
Sbjct: 90  RIIMADFATEHGTLTVVN-----GYFPQGESRDHPVKFPAKTRFYQDLQTYLEQHHSATQ 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                          L    ++   +     +  F     
Sbjct: 145 PLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMARLQRWGLIDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  +           D      ++ S
Sbjct: 205 DSNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAERCVATGI-------DYDIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 258 DHAPIWAQFS 267


>gi|206580746|ref|YP_002239049.1| exodeoxyribonuclease III [Klebsiella pneumoniae 342]
 gi|206569804|gb|ACI11580.1| exodeoxyribonuclease III [Klebsiella pneumoniae 342]
          Length = 268

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 79/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +   Q L++++  +     
Sbjct: 90  RIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELNKEN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  + +   
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLGWGLVDTWRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 DNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-------DYEIRGMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|296446338|ref|ZP_06888283.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b]
 gi|296256111|gb|EFH03193.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b]
          Length = 258

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 81/303 (26%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  Y + +  D++ LQE+   +A    
Sbjct: 1   MRIATWNVN----------------SVRQRLEQLTAYLREVAPDVLCLQEIKCEDAA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K    + +  P             R
Sbjct: 42  -------FPRLEIEELGYNVETHGQKTFNGVAILSKTPIEVVRGLPKFE-----HDPQAR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V  +   + V  I+L +    ++ +  Y  +          L            
Sbjct: 90  Y-IEAVVSTDRGALRVASIYLPNGNPPETEKYAYKLAF------MDCLIAHAASLLALEE 142

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
           P V+AGD+N        +D        +             N       +          
Sbjct: 143 PVVLAGDYNVIPAARDVHDPAAWAGDALFLPQTRAKFQELTNLGYTEALRATTDAAGLYT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L   +        D     G + SDH PI  
Sbjct: 203 FWDYQAGAWQRNKGIRIDHLLLSPQAADRLQSVTI-------DKNLRAGAKPSDHVPIRC 255

Query: 301 DYD 303
           + +
Sbjct: 256 ELE 258


>gi|220921344|ref|YP_002496645.1| endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS
           2060]
 gi|219945950|gb|ACL56342.1| Endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS
           2060]
          Length = 279

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 81/280 (28%), Gaps = 40/280 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+++N+      +G                 + +   +   D+V LQE+      + +
Sbjct: 21  LRLITYNVRRCLGIDGRLSPV-----------RIAEVLASCRPDVVALQELDVGRMRSGM 69

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +   R   H+      + +   A+       L ++  L G  D       R
Sbjct: 70  VDQAHAIAQHLGMRAHFHAALRVMEEEY-GNAILTALPSRLVRAEALPGLPDRPH-LEPR 127

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+   +  +  +I V+  HL       + +         L                   
Sbjct: 128 GALWAAITAHDTEIQVIATHLGLRRRERARQAEALLGSRFL------------SDPACRP 175

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+ GD N   +         + +         P+ +        +    + +D+  + 
Sbjct: 176 PVVLVGDLNAVPHSFAYRRLAGR-LSDAQRAPGMPRRQ----RTYPSACPLLRLDHVFVS 230

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +      ++                 +  SDH P+ +D +
Sbjct: 231 EGVTVRRVEV----------VRGPLARIASDHLPLLVDLE 260


>gi|325205470|gb|ADZ00923.1| exodeoxyribonuclease III [Neisseria meningitidis M04-240196]
          Length = 256

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++V              S      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRSVPEDVHF-----GLPSLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   +DS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEAIDSPKFKYKE------QWFAALTEFVRDEMARHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|237745581|ref|ZP_04576061.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS]
 gi|229376932|gb|EEO27023.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS]
          Length = 255

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 87/304 (28%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      + Q+  +   D++ LQE    +     
Sbjct: 1   MKIATWNVNSL----------------KVRLPQVLQWLNDNPVDVLCLQETKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    +    +  +A+  +     Q +  +L     F     R
Sbjct: 41  ------KFPVMEIAAAGYQTVFTGQKTYNGVAILSR-----QSAGDILKNNPFFPDEQQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V     K+ V+  ++ +   +DS +  Y           + L  W+ ++K+   
Sbjct: 90  I-----VTGTFGKLRVVCAYVPNGQAVDSDKYRYKIE------WLKALHAWLLEEKKKYP 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GD+N                           ++ +     +  F +         
Sbjct: 139 YLALLGDYNIAPEDRDVYDPAAWEGNVLVSEPERAAFRALLDIGFVDAF-RLFSQPEKTY 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +D+ ++ +N        +        D +  + K+ SDH P+ 
Sbjct: 198 SWWDYRQLAFPRNRGLRLDHILLSENLAPHCTACTI-------DRMPRKWKQPSDHTPVI 250

Query: 300 IDYD 303
            + +
Sbjct: 251 AELE 254


>gi|23098760|ref|NP_692226.1| hypothetical protein OB1305 [Oceanobacillus iheyensis HTE831]
 gi|22776987|dbj|BAC13261.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 373

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/292 (11%), Positives = 84/292 (28%), Gaps = 58/292 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
            +++ ++N+   +  +G             +   L     +LD DI+ LQE+  +     
Sbjct: 35  DLKVGTFNVAAGTGLDG-----------EYNIDRLADTISDLDVDIIGLQEVDVHWGYRS 83

Query: 80  -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + ++  +     +++    +        N  +  + V  K   V  ++  +    
Sbjct: 84  NFDHMMEELASRLDMEYYFAPIYDLAPVNEGDPNRQY-GVGVLSKYPIVDAENRKITRLS 142

Query: 135 DSFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                         ++  + + G ++     HL            Y    ++   Q   +
Sbjct: 143 TQVPNPFPTREPGFLQAKINVEGAEVMFYVTHL-----------DYRGDPTIREMQVADM 191

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           ++ +          ++ GD N + N       F   +D            D+  N     
Sbjct: 192 QEIM----SEGNYNILVGDMNARPNATEIGPLFRDFVD-------VWGVHDTDGNTFPAH 240

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                IDY +  +       +                    SDH P++ + +
Sbjct: 241 NPDRRIDYILASKRMEVKTAEVKNEVES-------------SDHLPVTAEIE 279


>gi|86159101|ref|YP_465886.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775612|gb|ABC82449.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 282

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 55/285 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+V+WN++ L                  D   + +   ++ AD+  LQE+G+       
Sbjct: 24  FRVVTWNVHGLRGAGRRP-----------DPERIARVLDDIGADVAGLQEVGAS------ 66

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            P        +  RL   +        H        A+  ++     ++Y L        
Sbjct: 67  LPGADAHAAEALARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGR--- 123

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  +   V +   ++ V   HL                     Q A  L   I + 
Sbjct: 124 --EPRGCLRADVVLGPMRVHVFAAHLGLHWR------------ERRRQAAALLSADILRD 169

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P V+ GDFN   +         +T+         P                + +D
Sbjct: 170 AALSHPLVLVGDFNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWP------LLRLD 223

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +D      ++                  +R SDH P+ ++ +
Sbjct: 224 RAYVDAAL--RVVACEVVRTPR--------ARRASDHLPLVVELE 258


>gi|30248054|ref|NP_840124.1| exodeoxyribonuclease III:exodeoxyribonuclease III xth [Nitrosomonas
           europaea ATCC 19718]
 gi|30179939|emb|CAD83934.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Nitrosomonas
           europaea ATCC 19718]
          Length = 254

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 82/303 (27%), Gaps = 74/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  +      DI+ LQE    +     
Sbjct: 1   MKIATWNVNSL----------------KVRLQQVIDWLNLNQPDILCLQETKLQDEF--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +         +  +A+  K      ++   +           +
Sbjct: 42  -------FPMDAIAQAGYRSIYIGQKTYNGVALLSK------ETGEDICTALPGFDDMQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +          + V+  ++ +   +DS +  Y        +    L  ++ Q++    
Sbjct: 89  RLIAATY----GDLRVICAYVPNGEHVDSEKYIYK------LEWLSQLNRFLQQQRACYG 138

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GDFN         D                 ++ +     +  F    +      
Sbjct: 139 KVALLGDFNIAPEDRDVYDPEAWRGQVLCSEPERQAFRGLLDTGFVDSF-HLFEQPEKTY 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++                ++  D +  + +R SDH P+ 
Sbjct: 198 TWWDYRMMAFRRNRGLRIDHILLSHEMADRCT-------IWQVDKLPRKLERPSDHAPVL 250

Query: 300 IDY 302
           ++ 
Sbjct: 251 VEL 253


>gi|189346698|ref|YP_001943227.1| Endonuclease/exonuclease/phosphatase [Chlorobium limicola DSM 245]
 gi|189340845|gb|ACD90248.1| Endonuclease/exonuclease/phosphatase [Chlorobium limicola DSM 245]
          Length = 347

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/354 (11%), Positives = 90/354 (25%), Gaps = 65/354 (18%)

Query: 1   MIRKYVLALVFFLVPCT--------ASVAQKVRLVSWNINTLSE-------QEGVSLWKN 45
           M +     L+ + V                 + L+ WN+  L +        +     + 
Sbjct: 1   MKKSITCILLIYTVLVLHSIKIHAGEQKNDSLLLMWWNVENLFDTHNDPDIDDEEFTPEG 60

Query: 46  SVKRTTSDYT----LLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFY 93
               T          ++Q   +++         DI+   E  +    A +  +       
Sbjct: 61  RNHWTQKKLALKRLRIKQVLDSINTSPEYRRYPDILAFAETENRTVFAGILKE-----IG 115

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           S+     + +      I   +A   + VR++   + ++      +    R  +       
Sbjct: 116 SSPYKTLYIESPDKRGIDIGLAYNPQTVRLISSKFYIVPVG---NDKPTRHIIIAGFSAG 172

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSP-SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           G    ++  H  S  F           +       A  L+       ++ +  +I GDFN
Sbjct: 173 GHPFRLMLNHWPSRAFDKEWTEQKRITAAKTARHIADSLRR-----TDATIDLIIMGDFN 227

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNKIPIDYFVMDQN 265
            +            +      + R   +    C +            N   ID  ++   
Sbjct: 228 DEPENRSIKQVLGSS-GDAARVRRACSDLLYNCWSGYSGIGSYSYRNNWERIDQILLSCG 286

Query: 266 AYKFLIQESFS----------------EILYNEDDIKSRGKRLSDHCPISIDYD 303
             +                           Y+           SDH P+ +  D
Sbjct: 287 MLQKKGLSISHNAFRCFYFPNMLAQSANRPYSTYHKGKYKGGYSDHLPLLLKVD 340


>gi|83942567|ref|ZP_00955028.1| exodeoxyribonuclease III [Sulfitobacter sp. EE-36]
 gi|83846660|gb|EAP84536.1| exodeoxyribonuclease III [Sulfitobacter sp. EE-36]
          Length = 265

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 83/309 (26%), Gaps = 71/309 (22%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SY 77
               +++ ++NIN                   +    L Q+      D+  LQE+     
Sbjct: 2   QGAVMKIATFNING----------------IKARIDALPQWLDEAQPDVAILQEIKSVDE 45

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               ++F    + +                      +A+  K               D  
Sbjct: 46  GFPRELFEDRGYNV------------ETHGQKSFNGVAILSKLPLEDVTRGLPGDESDEQ 93

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           +R      +E  V  +   + +  ++L +       +  Y  +        Q L+D    
Sbjct: 94  ARY-----IEATVVGDHSSVRLCGLYLPNGNPAPGPKYDYKLA------WMQRLEDRARA 142

Query: 198 KKESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKD 242
                 PF++ GDFN                   +   +   W+ +        F     
Sbjct: 143 LLAEETPFLLTGDFNIIPQAEDAATPDAWREDALFRPESRAAWRRLLALGLTEAFRARTQ 202

Query: 243 SRCNANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              + +            N I ID+F++       L            D      ++ SD
Sbjct: 203 GPGHYSFWDYQAGAWNRNNGIRIDHFLLSPAIADSLRDCQI-------DKDVRGREKPSD 255

Query: 295 HCPISIDYD 303
           H P+ ++ D
Sbjct: 256 HVPVWVELD 264


>gi|300309579|ref|YP_003773671.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1]
 gi|300072364|gb|ADJ61763.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1]
          Length = 265

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 85/302 (28%), Gaps = 63/302 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+ ++NI+             +          L+Q    LD DI+FLQE+   + +  
Sbjct: 2   KLRVATYNIH----------KGVTSFAGRPRILALKQALAQLDPDILFLQEVQGRHDLNA 51

Query: 83  VFPKNTW------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +   + W                 +      +  H   A+  +      ++  +     S
Sbjct: 52  LRHASNWPQQGQHEYLAGDTHHAAYGMNAVYDHGHHGNALISRFEIASIRNQDV-----S 106

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                +R  +  +V + G ++    IHL  F                  +Q   L   ++
Sbjct: 107 DHAYESRGILHCVVPVEGVEVHCYVIHLGLFAGG-------------RRRQIDALIQAVS 153

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS------------- 243
                  P +IAGDFN   N L      ++ +   +   +                    
Sbjct: 154 TSSPPDAPLLIAGDFNDWTNQLS--RTLYQNLGVTEVFDQPQPNARGVMQGLRRLGGLSA 211

Query: 244 ---RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                     +   + +D   +            F               RLSDH PI  
Sbjct: 212 PIRPARTFPAMMPWLRLDRIYVRG----------FRVETAEVLKDGP-WARLSDHAPIVT 260

Query: 301 DY 302
           + 
Sbjct: 261 EL 262


>gi|157370955|ref|YP_001478944.1| exonuclease III [Serratia proteamaculans 568]
 gi|157322719|gb|ABV41816.1| exodeoxyribonuclease III [Serratia proteamaculans 568]
          Length = 268

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 80/310 (25%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +         H  +A+  K   +  +       +D+      R
Sbjct: 42  FP-------LEEVSQHGYHVFYHGQKGHYGVALLTKEKPLAVRRGFPTDDEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       ++  Q L++++ Q+     
Sbjct: 90  RIIMADLATPQGTLTVIN-----GYFPQGESRDHPTKFPAKTRFYQDLQNYLEQQMSVDS 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N   +                           ++   +     +  +     
Sbjct: 145 PVLVMGDVNISPSDYDIGIGEESRKRWLRTGKCSFLPEEREWMDRLMNWGLVDTYRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R +       +           ID  +                     D      ++ S
Sbjct: 205 ERNDQFSWFDYRSRGFDENRGLRIDLLLASTPLAARCTATGI-------DYQIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH P+  ++ 
Sbjct: 258 DHAPVWAEFS 267


>gi|126331541|ref|XP_001377893.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Monodelphis domestica]
          Length = 376

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 90/301 (29%), Gaps = 26/301 (8%)

Query: 17  TASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           + S    +R++ WNI    L E ++          +      L+ +       DI+ LQE
Sbjct: 81  STSSHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQE 140

Query: 74  MGSY-NAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +  Y +    +  +  +   +  +        + ++  D      ++ +   V   +  L
Sbjct: 141 VDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQSRFALVNSTNIRL 200

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                  ++     A  L     G+   +   HLK+           +      S Q   
Sbjct: 201 TAMTLKTNQVA--IAQTLECRKTGRLFCIAVTHLKA----------RTGWERFRSAQGSD 248

Query: 191 LKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           L   +    + + +P ++ GDFN +            +++ + +      +  S      
Sbjct: 249 LLQNLQSITQGAEIPLIVCGDFNAEPTEEVYRHFASSSLNLSSAYKLLSADGQSEP-PYT 307

Query: 250 NLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +        +DY    + A                 +        SDH  +  D+ 
Sbjct: 308 TWKIRSSGECRHTLDYIWYSRQALHVRSALGLLTEEQIGPNRLPSFNYPSDHLSLVCDFS 367

Query: 304 F 304
           F
Sbjct: 368 F 368


>gi|163753635|ref|ZP_02160758.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1]
 gi|161325849|gb|EDP97175.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1]
          Length = 269

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 97/302 (32%), Gaps = 42/302 (13%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
            L ++      T +  +++ ++SWNI                 +   +   + +  K   
Sbjct: 3   YLIILLLFATTTIAQNKEITIISWNIQHFG-----------KTKNAEEIEKIAEIVK--H 49

Query: 66  ADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           ADI+ +QE+        AV ++              +   +   S      AI  + K++
Sbjct: 50  ADIIAIQEVVTTFQGVQAVNRLTEALEKKGESWDYLISEKTNSPSRMTECYAIVWKNKHI 109

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           ++  +            +  +R    +   +     +V++ H K                
Sbjct: 110 KI--KKGHEGSLVKELDKMVDREPFLVQFYVADTSFFVMNYHAKPHKRNP---------- 157

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                + + L  ++ +  ++   F++AGDFN   +     +       P +   +   + 
Sbjct: 158 ---RPEVKELLAYVQKNYKNKK-FILAGDFNLSQSEEVFKNFKLAGFKPVNIDQKTTLKL 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-DIKSRGKRLSDHCPISI 300
              C     L     ID           +   S   I + +  D  +  +RLSDH P+ +
Sbjct: 214 I--CKNASYLNYP--IDNIFYTP----KINATSTKIIDFVKHCDNLTASRRLSDHLPVEL 265

Query: 301 DY 302
            +
Sbjct: 266 KF 267


>gi|90415898|ref|ZP_01223831.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2207]
 gi|90332272|gb|EAS47469.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2207]
          Length = 271

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 75/311 (24%), Gaps = 78/311 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+VS+N+N L                 S    L         DI+ LQE    +      
Sbjct: 4   RIVSFNVNGL----------------RSRLHQLEAMINQHSPDIIGLQETKVSDE----- 42

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   +     + +         H  +A+  K   +          +D+      RR
Sbjct: 43  -----EFPHQAIADLGYEVNFHGQKGHYGVALLSKAPAINITRGYPSDGEDA-----QRR 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +     ING+ + V++       F       +        +    L  ++     +   
Sbjct: 93  MIHGQYSINGQTVHVIN-----GYFPQGESRAHPTKFPAKEKFYADLLAYLDSNFNADDL 147

Query: 205 FVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             + GD N   N                                 +D         +   
Sbjct: 148 VSVMGDMNVAANDIDVGIKPENAKRWIKTGKCAFLPEERQWLQNLLDWGLQDSFREQNAA 207

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               +      +             ID  +   +  K + +          D      ++
Sbjct: 208 DD--SYSWFDYRSKGFELEPKRGLRIDLILASPSLMKLVTETGI-------DTAARGFEK 258

Query: 292 LSDHCPISIDY 302
            SDHCPI  D 
Sbjct: 259 PSDHCPIWADL 269


>gi|325283955|ref|YP_004256496.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus
           MRP]
 gi|324315764|gb|ADY26879.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus
           MRP]
          Length = 1050

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 92/317 (29%), Gaps = 46/317 (14%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
              +++   N+ N  +         +S          +    + LDAD+V L E+ +   
Sbjct: 477 GGTLKVAGANVLNYFTTFGPNDRGADSAYEFGRQQAKVVAALRGLDADVVTLMEVQNNGD 536

Query: 79  -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A+  +        + S       +     + I  A+  +        +  PL   +   
Sbjct: 537 VALNDLVASLN-AAYGSETYRAVQTGTIGTDAIKVAVIYKP------ARVTPLGTYQTDT 589

Query: 138 SRAGNRRAVELLVEIN--GKKIWVLDIHLKS-FCFLDSLENTYSPSC--SLLSQQAQWLK 192
               +R  +      N  G    V+  H KS      S +      C   L  QQA+ L 
Sbjct: 590 DPVHSRPPLAQTFRDNAGGGVFTVVANHFKSKGSCPSSGDMDTGEGCWNELRVQQARALL 649

Query: 193 DWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
            ++ +   +      ++ GDFN             +TI     +    +       + + 
Sbjct: 650 GFVERLKAQSGDSDVLLMGDFNAYGAEKPI-----QTIVDGGFVSENLRIPAEERYSYQF 704

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------------------- 289
                 +D+ +  ++    +   +   I  +E  +                         
Sbjct: 705 GGQFGYLDHALASRSLDAQVSGVTEWHINADEPTLADYNVEYKANPECRTNVCTSPDLWQ 764

Query: 290 ---KRLSDHCPISIDYD 303
               R SDH P+ +  +
Sbjct: 765 NNPFRASDHDPVLVGLN 781


>gi|190575134|ref|YP_001972979.1| putative endonuclease/exonuclease/phosphatase family secreted
           protein [Stenotrophomonas maltophilia K279a]
 gi|190013056|emb|CAQ46688.1| putative endonuclease/exonuclease/phosphatase family secreted
           protein [Stenotrophomonas maltophilia K279a]
          Length = 294

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 86/281 (30%), Gaps = 36/281 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V++N++   E                    +    K L  D V LQE+     V   
Sbjct: 46  MSMVTFNLHHDRED------------WPRRRRTILAELKRLQPDAVALQEVIQRRNVR-- 91

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  W       + +  S            A+  +   + Q  + L    D       R
Sbjct: 92  -NQAQWLASQLGYKYVFVSTDAVGAPKRYGNALLTRRPILAQGDHLLQPLDDY------R 144

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L ++++G  + V   HL         E +      +   Q + L  +I+    +  
Sbjct: 145 TVAHLRIDVDGTPVNVYATHLN--------ERSDESGQRIRRSQVEDLLRFISAT-SAGA 195

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P VIAGDFN  ++    ++      D   S+                 +    ID+    
Sbjct: 196 PVVIAGDFNALVDAGDLSELRSHYGDSYGSVHVNTDLSGVSTLNRHYYQAPSRIDHIFFQ 255

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Q+    ++      +    DD    G+  SDH  +     F
Sbjct: 256 QD---EMVAREAKILFDQPDDS---GRWASDHYGVWTRLQF 290


>gi|262369779|ref|ZP_06063107.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315847|gb|EEY96886.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 440

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 93/298 (31%), Gaps = 34/298 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             AS A + +++++NI  L              +  S    L Q  K  DA  +  QE  
Sbjct: 166 PVASSADEFKVLTYNIYALPL---------VASKIDSRLEQLPQNLKGYDA--ILFQETF 214

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           +    A +        + +   + +       N   + I V   +  V    +       
Sbjct: 215 ASGRTAMLAKLAQEYPYQTYIPIGS-----GFNIYDSGILVASHHPIVKTDHFIYPSCPG 269

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
               A  +  +   +  NGK   V   H  SF    + +           +Q + L D  
Sbjct: 270 IDCFAD-KGVIYAEILKNGKAYHVTSTHTASFDTDAARDMRQQQ-----FKQIRALVD-- 321

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251
            Q   S    ++ GDFN     L   D     I+ N ++       +S  +   N     
Sbjct: 322 KQNIPSFDAVLMGGDFNVN-KLLWPQDYAQMQINLNGTVPVSTGYTESTFDPRVNKLAGA 380

Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     +DY V   N  + +   +   IL +  D       LSDH P+   + +
Sbjct: 381 GLTGGSTVEYLDYVVSSNNHRQPMQARNDVRILRSAADPLFMTWDLSDHFPVMGQFQY 438


>gi|108757277|ref|YP_635313.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108461157|gb|ABF86342.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 996

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 85/296 (28%), Gaps = 29/296 (9%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---G 75
           + +  + +  WN+                          R   ++   ++  L EM    
Sbjct: 547 TASAPLTVGHWNLEWFGAPTQGPPDD-------LQMAHARDIIRDSGVNVWGLVEMVDAA 599

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +  + +  P     +   T  + N +   SN +    I           Q      A D
Sbjct: 600 DFATLKEQLPGFNGFLANDTSFVPNGTAYYSNGEQKPGILYDSTLTLQEAQLILTANAAD 659

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              R   R      V+     + V+ +HLK+F            +     + +  LK ++
Sbjct: 660 FGGRPPLRVDFTTTVDGVSTPLVVIVVHLKAF--------DNQTAYEQRQRSSAALKSYL 711

Query: 196 TQKKESLVPFVIAGDFNRKINYL--------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                S    ++ GD+N  ++               F   +          +   S    
Sbjct: 712 DTSLPS-ERVLVIGDWNDDVDQSITQGSDGAPLPSPFAPFVADTQRYTFITE-PLSLRGL 769

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +     ID+ ++        +  S   +   +  I + G  +SDH P+   YD
Sbjct: 770 RTTVDYPDAIDHTLVSNELAANYLPGSVEIL-RPDAWIPNYGDIVSDHYPVISSYD 824


>gi|149279437|ref|ZP_01885567.1| hypothetical protein PBAL39_16596 [Pedobacter sp. BAL39]
 gi|149229730|gb|EDM35119.1| hypothetical protein PBAL39_16596 [Pedobacter sp. BAL39]
          Length = 294

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 87/309 (28%), Gaps = 41/309 (13%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M  K + A++  ++   AS AQ+  + ++NI   +  +  +       R      +    
Sbjct: 14  MKIKSLFAVLILVLAGAASYAQQYTVGTFNIRNDNSGDVGN-------RWEQRGPVSANL 66

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            +    D+  +QE               +  + +           S            K 
Sbjct: 67  LRFHQYDVFGVQEAFKNQVDDLQRLLPEYDHYGAGRDDGKDGGEHSTVFYRKDKFKLIKK 126

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178
                   P        +   NR    + ++    GK+ +  + H     F    +    
Sbjct: 127 GDFWLSENPDRPGLGWDATCCNRICSYVCLQDLKTGKQFYFFNAH-----FDHEGKIARV 181

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S  L+  + + +           +P +  GD N   +     + +    +       + 
Sbjct: 182 ESSKLIISKIRSIA--------GKLPAIFTGDLNGGHSS----EWYLTLANSGFLKDTYG 229

Query: 239 KEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           + K    N             K  ID+  + ++              +        GK +
Sbjct: 230 QVKFPYANNASFNAFGKALEGKEIIDHVFVTKDFTAK---------RWGLLTDTYHGKFI 280

Query: 293 SDHCPISID 301
           SDH P+ +D
Sbjct: 281 SDHFPVLVD 289


>gi|108762628|ref|YP_630932.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108466508|gb|ABF91693.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 254

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 88/282 (31%), Gaps = 47/282 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++RLVS+NI++    +G             D   +    + +DADIV LQE+G + AV  
Sbjct: 2   ELRLVSYNIHSGIGTDGRF-----------DLGRVGAVLREVDADIVALQEVGDFRAVTP 50

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +           +         N      A+  +   V  ++Y L     S  R   
Sbjct: 51  REDQPEHLADMLGLHMAFGPNV-VRNGRRYGNAILSRLPIVKSRNYDL-----SVGRREP 104

Query: 143 RRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R A+   ++I G  ++ V  +HL                     Q+A  L   I +    
Sbjct: 105 RGALRCDLDIGGGLQLHVFSLHL------------GLRLGERRRQEALLLSSDILRDAAR 152

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P V+ GDFN   N    +                  E  +           + +D   
Sbjct: 153 KDPLVVCGDFNYWGNGPVPSLVRQAI-------HDAALELGAPARTYPTRLPLLRLDRIF 205

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D       I                  +  SDH P+ + ++
Sbjct: 206 VDAGVRPLSI----------HPHRTELSRVASDHLPLVLRFE 237


>gi|45658468|ref|YP_002554.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
 gi|45601711|gb|AAS71191.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 623

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 95/293 (32%), Gaps = 25/293 (8%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++S N+  L     +  W N      +       Y K  + D++  +E    +A   
Sbjct: 154 EIKVLSHNVFMLPTN--LPRWGNLGHDERAKRISKSDYVK--NQDVIVFEEAFDTSARKI 209

Query: 83  VFPKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T            +     S + ++  + +  K     +  Y    + 
Sbjct: 210 LLDNLREEYPYQTDVVGRTKKNWDASLGNFRSYSLVNGGVVILSKWPIEEKIQYIFNDSG 269

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  N+  V + +   GKK  V+  H +S       +N  +      + Q   ++++
Sbjct: 270 CGTDWFANKGFVYVKINKEGKKFHVIGTHAQS-----QDQNCSNLGIPNRANQFDDIRNF 324

Query: 195 I-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANK 249
           I ++        +I GD N         D   +        +  P   D++ N       
Sbjct: 325 IYSKNIPKDETVLIVGDLNVIKESNEYYDMISRLNVNEPRYVGVPFTWDAKTNEIAAYYY 384

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPIS 299
                + +DY  + ++  +  + ++ +    ++      G      SDH PI 
Sbjct: 385 ENEEPVYLDYIFVSKSHAQPPVWQNLAYDPVSKQTWTVSGYTSDEFSDHYPIY 437


>gi|301761530|ref|XP_002916188.1| PREDICTED: nocturnin-like [Ailuropoda melanoleuca]
          Length = 452

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 84/297 (28%), Gaps = 20/297 (6%)

Query: 18  ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            S    +R++ WNI    L E ++          +      L+ +       DI+ LQE+
Sbjct: 157 PSSHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYHPDILCLQEV 216

Query: 75  GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             Y +    +  +  +   +  +          +N     A+   +   +++  +   L 
Sbjct: 217 DHYFDTFQPLLGRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 276

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A    +      A+   +E                          +  C         L+
Sbjct: 277 AMTLKTNQ---VAIAQTLECKESSRQFCIAVTHLKARPGWERFRSAQGC-------DLLQ 326

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +       + VP ++ GDFN +            +++ + +      +  S         
Sbjct: 327 NLQNITHGAKVPLIVCGDFNAEPTEEVYKHFASSSLNLSSAYKLLSADGQSEPPYTTWKI 386

Query: 253 N-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +  +DY    Q+A +               +        SDH  +  D+ F
Sbjct: 387 RTSGECRHTLDYIWYSQHALRVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 443


>gi|193222381|emb|CAL62516.2| Putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans]
          Length = 254

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 85/303 (28%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L                      ++Q+  +   D++ LQE  + +     
Sbjct: 1   MKLATWNVNSL----------------KVRLPQVQQWLVDNPVDVLCLQETKTVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  ++              +       +
Sbjct: 41  ------KFPVAEIEAAGYQVAFTGQKTYNGVAILSRHPITDVTKN------NPLLDDEQQ 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +    + I ++  ++ +    DS +  Y           + L +W+ Q+++   
Sbjct: 89  RIIAGTI----QGIRIVCAYVPNGQSPDSDKYIYK------LNWLKALHEWLAQEQQQHP 138

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
              + GD+N        +D      + +                     +  +       
Sbjct: 139 ELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAFVRLQEMGFTDAFRMFEQPEKLYS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++                    D +  + ++ SDH P+  
Sbjct: 199 WWDYRQMGFRLNRGLRIDHILLSAPLAARCSACVI-------DKVPRKWEQPSDHTPVIA 251

Query: 301 DYD 303
             D
Sbjct: 252 TID 254


>gi|156839947|ref|XP_001643659.1| hypothetical protein Kpol_1040p14 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114279|gb|EDO15801.1| hypothetical protein Kpol_1040p14 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 784

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 93/327 (28%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L+    +  +D++ LQE+ S 
Sbjct: 448 QKKSFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRREKLKDQILSFKSDVICLQEVESK 507

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK----RDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +      P      +  T      +K    +DS       I  ++    VL +       
Sbjct: 508 SYEEFWLPLLQKNGYAGTFYAKTRAKTMQTKDSKKVDGCCIFYKESEFNVLYKDSVDFSG 567

Query: 134 KDSFSRAGNR-------------RAVELLVE--INGKKIWVLDIHLKSFC-FLDSLENTY 177
                +   R              A+ + +E   +G+ +WV+  HL     F D      
Sbjct: 568 VWMKHKKFQRTEDYLNRAMNKDNVALYMKLEHIKSGESVWVVTTHLHWDPQFNDVKTFQV 627

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL--------------GNNDD 223
                 L +  +   +  ++++    P +I GD N  ++                   + 
Sbjct: 628 GILLDHLEELLKDNNNASSKQEIRKCPVIICGDLNSHLDSAVYELLSTGHVQVHKDIENR 687

Query: 224 FWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
           F+  +   +            C       N        IDY            +     +
Sbjct: 688 FYGYMSQKNFAHNLALRSSYDCIGELPFTNFTPSFTDVIDYIWYSTHALRVRGVLGPVDK 747

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH P+   Y+F
Sbjct: 748 DYVSKFIGFPNDKFPSDHIPLLARYEF 774


>gi|86749875|ref|YP_486371.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
 gi|86572903|gb|ABD07460.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
          Length = 276

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 87/312 (27%), Gaps = 71/312 (22%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG- 75
                  +R+ +WN+N                        L  +      D+V LQE+  
Sbjct: 7   FEPTDNDMRIATWNVN----------------SVRQRLDHLVSWLNECAPDVVCLQEIKC 50

Query: 76  -SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +      + +                      +A+  K               
Sbjct: 51  VDEAFPREAIEALGYNVVTH------------GQKTFNGVALLSKYPLEEATPRLAGDDD 98

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D+ +R      +E +V +    + V  ++L +   ++S +  Y        +    L ++
Sbjct: 99  DTHARF-----LEGVVSLKRGVVRVACLYLPNGNPVESEKYPYK------LRWMSRLLEY 147

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPK 239
             Q+ ++  P ++AGDFN     +  ++                 ++ +           
Sbjct: 148 TQQRLKTEEPLILAGDFNVIPQPIDVHNPAGWVDDALFRPQTRESFQALLGLGLTDALRA 207

Query: 240 EKDSRCNANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             D+                   + ID+ ++   A   L            D      ++
Sbjct: 208 STDAPGQYTFWDYQAGAWQKNWGLRIDHLLLSPQATDRLRNVGI-------DAYVRNWEK 260

Query: 292 LSDHCPISIDYD 303
            SDH P+  D+D
Sbjct: 261 PSDHVPVWADFD 272


>gi|229591315|ref|YP_002873434.1| exonuclease III [Pseudomonas fluorescens SBW25]
 gi|229363181|emb|CAY50233.1| exodeoxyribonuclease III [Pseudomonas fluorescens SBW25]
          Length = 270

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/313 (10%), Positives = 83/313 (26%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVHDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+  +   +          +D+      R
Sbjct: 41  ------QFPLAEVQALGYHVYYHGQKGHYGVALLSRQPALSLHKGFASDEEDA-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     + +G+ + +++       F       +        +  + L+  +  +  + 
Sbjct: 90  RFIWGTFADEHGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYEDLQQLLESQFSND 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
              V+ GD N                        ++L    ++   +     +  F    
Sbjct: 145 QALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSFLPEEREWMARLKNWGLVDSFRHLN 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +        +            D      +
Sbjct: 205 PDVVDRFSWFDYRSRGFEDEPKRGLRIDVIMASNGLLPRVKDAGV-------DYDLRGLE 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI ++  
Sbjct: 258 KPSDHAPIWLELS 270


>gi|264676938|ref|YP_003276844.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2]
 gi|299531500|ref|ZP_07044906.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44]
 gi|262207450|gb|ACY31548.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2]
 gi|298720463|gb|EFI61414.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44]
          Length = 254

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 90/293 (30%), Gaps = 53/293 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            T    Q +R+ ++NI+           +        +   L    + LDADIV LQE+ 
Sbjct: 7   FTPPEPQILRVATYNIH--------KGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVR 58

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYP 129
             N   + +  + W      E L                D     A+  +   +  Q   
Sbjct: 59  KMNRKEEQY-FDRWPNVPQAEYLAPEGYESVYLTNAYTRDGEHGNALLSRWPVIGYQH-- 115

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                 S  R   R  + + ++I+GK++  + +HL                     +Q  
Sbjct: 116 ---EDISDHRFEQRGLLHVELDIHGKRVHSIVVHLGLIPGS-------------RIRQIA 159

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L+ +I ++     P V+AGDFN         D   +          F  E+        
Sbjct: 160 LLQRFIEREVPPNAPLVVAGDFN---------DWGNQIKRMLAGFGLFEYEETQGILTYP 210

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +      +D+  +       L                    R+SDH P+  ++
Sbjct: 211 SRLPIAQLDHIYVRG-----LTPLGLQVPKGRI------WWRMSDHLPLIAEF 252


>gi|171319848|ref|ZP_02908930.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
 gi|171094910|gb|EDT39940.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
          Length = 606

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 91/327 (27%), Gaps = 51/327 (15%)

Query: 16  CTASVAQK---VRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNL 64
            +A        +R+ S+N+       G+    +                   +    K L
Sbjct: 284 ASAPARDPKSNLRVASFNVLNYFNGNGMGGGFDDPNNRGAKTYPEFQRQEAKIVSALKAL 343

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRV 123
           DAD++ L E+ +         +       S  R+++    R   + I  A+    + V  
Sbjct: 344 DADVIGLMEIQNNGYGELSAVRQLAAKLGSNWRVVDPGTSRLGGDAITVAMIYDSRAVE- 402

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSP- 179
                P+  A        NR+ +         N + + +   HLKS    D+  +     
Sbjct: 403 -----PVGRASTLAIDDKNRQPLAQSFRRVGGNKQALTIAVNHLKSKNCPDAANDDLDQG 457

Query: 180 -----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                     ++ A  L DW+       +    ++ GDFN             + ++   
Sbjct: 458 DGQGCWNPTRTRAAAKLADWLAGTPTGVAGQGTLLIGDFNSYTYEDPI-----RLLESRG 512

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED--------- 283
                 +   +   +         +D+ +        +       I  +E          
Sbjct: 513 YRNLVSRWIGANAYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPLALQYTLAY 572

Query: 284 --------DIKSRGKRLSDHCPISIDY 302
                          R SDH P+ ID 
Sbjct: 573 KSTEQQKTYYAPDAYRSSDHDPVLIDI 599


>gi|160900882|ref|YP_001566464.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1]
 gi|160366466|gb|ABX38079.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1]
          Length = 257

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 83/285 (29%), Gaps = 53/285 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI+           +        +   L    + LDADIV LQE+   N   + 
Sbjct: 18  LRVATYNIH--------KGVQGMGPVRRLEIHNLGHAVEQLDADIVCLQEVRKMN-HKEA 68

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                W      E L                      A+  +   V  Q         S 
Sbjct: 69  AYFERWPQVSQAEYLAPLGYEAVYRTNAYTRHGEHGNALLTRWPVVGHQH-----EDISD 123

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  + + VE+  +++  + +HL                     +Q   LK +I +
Sbjct: 124 HRFEQRGLLHVEVEVQNRRVHTIVVHLGLIPGS-------------RVRQVSQLKRFIER 170

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           +     P V+AGDFN         D   +          +  ++        +      +
Sbjct: 171 EVPPGAPVVVAGDFN---------DWGGQIKRMLGGFGLYEYDELPSVPTYPSRLPLAQL 221

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+  +       L                    R+SDH P+  ++
Sbjct: 222 DHVYVRG-----LTPLGLHVPKGRI------WWRMSDHLPLIAEF 255


>gi|71909260|ref|YP_286847.1| exodeoxyribonuclease III [Dechloromonas aromatica RCB]
 gi|71848881|gb|AAZ48377.1| Exodeoxyribonuclease III [Dechloromonas aromatica RCB]
          Length = 254

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 75/303 (24%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N+L                      L  +      D + LQE          
Sbjct: 1   MKIASWNVNSL----------------KVRLPHLLDWLAAAQPDALCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    S    +  +A+  +        + ++     F     R
Sbjct: 35  LKLEDHNFPRAEIEAAGYQVAFSGQKTYNGVALLARQPI-----HDVICGNPHFPDEQKR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +         V+  ++ +   + S +  Y        +    L  W+ ++     
Sbjct: 90  LISGTV-----GDTRVVCAYMPNGQAVGSDKYDYK------LRWLDALAVWLGEEMSKYP 138

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
              + GD+N   +    +D        +                L    +  +       
Sbjct: 139 KLALCGDYNIAPDDRDVHDPKAWAGNILCSEPERAAFQRFIGLGLNDSFRLFEQPEKTFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D    + +R SDH P+  
Sbjct: 199 WWDYRMLGFQKNLGLRIDHVLLSAPLAAKCSAAGI-------DRAPRKLERPSDHAPVWA 251

Query: 301 DYD 303
           +  
Sbjct: 252 EIS 254


>gi|224537627|ref|ZP_03678166.1| hypothetical protein BACCELL_02509 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520769|gb|EEF89874.1| hypothetical protein BACCELL_02509 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 284

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 90/304 (29%), Gaps = 33/304 (10%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
             ++A V  +  C+     KV ++S+NI        +    +S+           Q    
Sbjct: 8   SVLVAFVLLVASCSKQPEAKVDVMSFNIR-------LDHVADSLNNWKYRKDAAAQMITY 60

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
              D+V +QE+              +                 +    T      K+   
Sbjct: 61  YAPDVVGMQEVLKNQLDDLKNRLPQYTALGVGRADGKEKGEYCSLFYKTDRFDLVKSGNF 120

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                P       +  A  R     ++  +++GK++   + H     F    +     S 
Sbjct: 121 GLSETPDSIGIKGWDAACERIVTWAVLKDKVSGKELAAFNTH-----FDHIGKVARRESA 175

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            LL  + + +         S +P VI GDFN  ++    +      +    S        
Sbjct: 176 VLLLAKIREIA--------SDLPVVIMGDFNGTVDSDPISVLTEGGMQNTYSTSDVVYGP 227

Query: 242 DSRCN--ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               +      +  +  ID+  ++      ++   F  I    D+       LSDH PI 
Sbjct: 228 AWSFHDFGRIPVEERQLIDFIFVNGQ----VVANKFRVIADKPDNG-----YLSDHAPIL 278

Query: 300 IDYD 303
            +  
Sbjct: 279 ANLT 282


>gi|163737422|ref|ZP_02144839.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis
           BS107]
 gi|161388948|gb|EDQ13300.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis
           BS107]
          Length = 331

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 103/329 (31%), Gaps = 49/329 (14%)

Query: 24  VRLVSWNINTL----SEQEGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVFLQEMG 75
           +RLV++N+          + + +   +  R   D       L +  + LDAD + + E  
Sbjct: 1   MRLVTYNVEWFSSLFGADDTLLMDGGTSGRHGVDRDSQTRALAEVFQRLDADGIMVIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQS------- 127
             N   K           +  R         ++     A     K + V           
Sbjct: 61  DTNNRRKTLRALEHFAQEAGLRSTKAVIGFANDTQQEIAFLYDPKVLHVAHSPRESAAAP 120

Query: 128 -------YPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYS- 178
                    L       +   ++  +EL V  NG ++I ++  HLKS     +  + ++ 
Sbjct: 121 RFDGVFHIDLDVDAQKDAVRFSKPPLELTVTTNGGREISLIGAHLKSKAPHGARSDDHAV 180

Query: 179 ----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226
                +      QA WL+  + Q     +  V+ GD N           F +        
Sbjct: 181 TLSIANRRKQLAQAIWLRRRVEQLLAEGLDVVVMGDLNDGPGLDQYEQLFNRSSVEIAME 240

Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYK----FLIQESF 275
               DPN   +  P+ +    +A              +DY ++     +    + I   F
Sbjct: 241 SDLYDPNAQSLLQPRLRVMPSSARFYDKANKRYFSALLDYIMVSSGLRQPAANWRIWHPF 300

Query: 276 SEILYNEDDIKSRG-KRLSDHCPISIDYD 303
            +    ED          SDH P+S+D D
Sbjct: 301 EDAACYEDVALREALLAASDHFPVSLDLD 329


>gi|170697069|ref|ZP_02888165.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
 gi|170138243|gb|EDT06475.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
          Length = 604

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 89/316 (28%), Gaps = 48/316 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+       G+    +                   +    K LDAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGMGGGFDDPNNRGAKSFQEFQRQEAKIVSALKALDADVIGLMEIQ 352

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         +       S  R+++    R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELSAVRQLAAKLGSNWRVVDPGMSRLGGDAITVAMIYDSRTVE------PVGRAS 406

Query: 135 DSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185
                  NR+ +         N + + +   HLKS    D+  +               +
Sbjct: 407 TLAIDDKNRQPLAQSFRRVGGNKQALTIAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A  L DW+       +    ++ GDFN             + ++         +   +
Sbjct: 467 RAAAKLADWLAGTPTGVAGQGTLLIGDFNSYTYEDPI-----RLLESRGYRNLVSRWIGA 521

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIK 286
              +         +D+ +        +       I  +E                     
Sbjct: 522 NAYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTYYA 581

Query: 287 SRGKRLSDHCPISIDY 302
               R SDH P+ ID 
Sbjct: 582 PDAYRSSDHDPVLIDI 597


>gi|332993545|gb|AEF03600.1| exodeoxyribonuclease III [Alteromonas sp. SN2]
          Length = 269

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 78/312 (25%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN                   +    L+        DI+ LQE  + +     
Sbjct: 1   MKVISFNING----------------IRARLHQLQALIDAHQPDIIGLQEIKVHNEQFPV 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A   K          L+G       A 
Sbjct: 45  EAVEAMGYHVYFH------------GQKSHYGVAFLAKKEPESV----LMGFPTDEEDAQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    + +G+ + VL+       F       +        +  + L  ++      
Sbjct: 89  RRMIILKTTDNDGQPVTVLN-----GYFPQGENEKHETKYPAKRKFYKDLMTYLDTHHTP 143

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
               ++ GD N                          L     +  T+        F   
Sbjct: 144 DENVIVMGDVNISHTDLDIGIGEENKKRWLRTGKCSFLPEERVWLNTLMDWGFEDSFRTL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +   + +K L            D      ++
Sbjct: 204 NPDTTDRYSWFDYRSKGFNDNRGLRIDLILATPSMHKRLSDAGI-------DYELRGIEK 256

Query: 292 LSDHCPISIDYD 303
            SDH PI   Y 
Sbjct: 257 PSDHAPIWATYS 268


>gi|262043063|ref|ZP_06016204.1| exodeoxyribonuclease III [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039595|gb|EEW40725.1| exodeoxyribonuclease III [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 268

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 79/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVARLGYNVFYHGQKGHYGVALLTKETPITVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +   Q L++++  +     
Sbjct: 90  RIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELNKEN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  + +   
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLLTGKCSFLPEEREWMDRLLGWGLVDTWRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 DNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-------DYEIRGMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|159903026|ref|YP_001550370.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9211]
 gi|159888202|gb|ABX08416.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9211]
          Length = 277

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 90/306 (29%), Gaps = 71/306 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+N                   +  + +  +   ++ D++ LQE  +   +   K+
Sbjct: 3   IATWNVN----------------SIRTRISQVEAFLSEVNPDLLCLQETKVEDASFPTKI 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    + +                   +  +A+  K+     + + + G   +   A   
Sbjct: 47  FEDKDYHL------------SFFGQKAYNGVALISKSPLKDVR-FGMSGELSNNPEAQYL 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              + ++      + ++++++ +   L S +  Y        Q    LK+++  + E   
Sbjct: 94  DEQKRVISTLLNGVRIINVYVPNGSSLTSDKYEYK------LQWLNCLKNYLDCQSERDE 147

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P  + GDFN  +                          K +   + L    +  +   N 
Sbjct: 148 PICLLGDFNIALEDKDIHNPNRLSGGIMASEPERKALRKLL--GERLEDIFRIFEQGTNH 205

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  + +                          + SDH P+
Sbjct: 206 WSWWDYRSGAWDRDRGWRIDHIYLSKELINHSKSCVIH-------KKSRGNIKPSDHAPV 258

Query: 299 SIDYDF 304
            ++ D+
Sbjct: 259 LVEIDW 264


>gi|218768830|ref|YP_002343342.1| exodeoxyribonuclease III [Neisseria meningitidis Z2491]
 gi|121052838|emb|CAM09187.1| exodeoxyribonuclease III [Neisseria meningitidis Z2491]
          Length = 256

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMARHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLADSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++     + L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDV-------RVDLETRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|85709819|ref|ZP_01040884.1| Probable exodeoxyribonuclease III [Erythrobacter sp. NAP1]
 gi|85688529|gb|EAQ28533.1| Probable exodeoxyribonuclease III [Erythrobacter sp. NAP1]
          Length = 272

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 80/308 (25%), Gaps = 67/308 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L+++ +     +  LQE+ S +     
Sbjct: 5   MKIATYNING----------------IKARLPRLKEWLEETRPAVACLQEVKSQD----- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK----NVRVLQQSYPLLGAKDSFSR 139
                     S    + +            +A+             Q    +        
Sbjct: 44  -----KDFPASEFEELGYQAIWHGQKAFNGVAILADTKAGYSAKEVQRGLGIDGPKEGEG 98

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  +E+ V        ++ I+L +       +  Y  +        + L+  + Q  
Sbjct: 99  EQARY-LEVDVTRESSTCRIVCIYLPNGNPQPGPKFDYKLA------WMEKLRGRMAQIW 151

Query: 200 ESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243
           ES VP  + GDFN                       +   + + +    +          
Sbjct: 152 ESEVPAAVLGDFNVIPEDDDVFSVKAMASDALMQPESRAAYARLLADGWTDALRTHNPRG 211

Query: 244 RCNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                 + +           ID+ ++       L+           D      ++ SDH 
Sbjct: 212 GVWTYWDYQAGAWQRDHGFRIDHILLSPELADRLVSVGV-------DREHRGREKASDHA 264

Query: 297 PISIDYDF 304
           P     +F
Sbjct: 265 PTWAKLNF 272


>gi|90423996|ref|YP_532366.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18]
 gi|90106010|gb|ABD88047.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18]
          Length = 267

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 85/306 (27%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
            +R+ +WN+N                        L  + K+   DIV LQE+        
Sbjct: 4   PMRIATWNVN----------------SVRQRLDHLLVWLKDCAPDIVCLQEIKCVDEAFP 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +      + +                      +A+  K               D  +R 
Sbjct: 48  REAIEALGYNVVTH------------GQKTFNGVALLSKYPLEEATPRLAGDDDDLHARF 95

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +E +V +    + V  ++L +    ++ +  Y        +    L D+  ++ +
Sbjct: 96  -----IEGVVSLKSGVVRVACLYLPNGNPPETEKYAYK------LKWMSRLLDYAKERLK 144

Query: 201 SLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRC 245
           +  P ++AGDFN         +                 ++ +             D+  
Sbjct: 145 TEEPLILAGDFNVIPAPGDVYNPAAWVGDALFKPQTRESFQALLGLGLSDALRAVTDAPS 204

Query: 246 NANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            I ID+ ++   A   L            D      ++ SDH P
Sbjct: 205 QYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGVGI-------DKHVRSWEKPSDHVP 257

Query: 298 ISIDYD 303
           + ID D
Sbjct: 258 VWIDLD 263


>gi|301168642|emb|CBW28232.1| exonuclease III [Haemophilus influenzae 10810]
          Length = 267

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 86/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K    + +       +D+  R  
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVVRRGFPTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     +  ++       F       +        +    L+ ++ ++ + 
Sbjct: 91  ---IIMADLETEFGLLTAIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L     +++ +        F K 
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ Q   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|238763171|ref|ZP_04624137.1| Exodeoxyribonuclease III [Yersinia kristensenii ATCC 33638]
 gi|238698670|gb|EEP91421.1| Exodeoxyribonuclease III [Yersinia kristensenii ATCC 33638]
          Length = 271

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 78/310 (25%), Gaps = 73/310 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ VS+NIN L                 +    L    +    D++ LQE         
Sbjct: 3   TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +FP               +         H  +A+  KN  +  +       +D+      
Sbjct: 44  MFP-------LEEVSQHGYHVFYHGQKGHYGVALLTKNEPLAVRRGFPTDEEDA-----Q 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +   +      + V++       F       +        +    L+ ++ Q+  S 
Sbjct: 92  RRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLSSD 146

Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
              +I GD N                          L     + + +     +  F    
Sbjct: 147 AQVLIMGDVNISPTDMDIGIGEESRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRAAN 206

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +         I           D      ++ 
Sbjct: 207 PDCNDQFSWFDYRSRGFDENRGLRIDLLLASHPLAARCIATGI-------DYDIRSMEKP 259

Query: 293 SDHCPISIDY 302
           SDH P+  ++
Sbjct: 260 SDHAPVWSEF 269


>gi|317478380|ref|ZP_07937544.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|316905539|gb|EFV27329.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 283

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 84/310 (27%), Gaps = 43/310 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           I   ++     +  C      KV ++S+NI        +    +S+           Q  
Sbjct: 6   INSVLVVFALLVASCGRQPEAKVEVMSFNIR-------LDHVADSMNNWKYRKDHAAQMI 58

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI+ +QE+              +                 +    T      K+ 
Sbjct: 59  AYYAPDIIGMQEVVKNQLDDLKERLPQYTALGVGRADGEEKGEYCSLFYKTDRFELLKSG 118

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                  P    K  +  A  R     ++  +++G++I   + H     F    +     
Sbjct: 119 NFGLSETPDSIGKKGWDAACERIVTWAVLKDKVSGREIAAFNTH-----FDHVGKVARRE 173

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLIRF 237
           S  L+ ++ + +           +P ++ GDFN  ++           +      +    
Sbjct: 174 SAVLILEKIKQMA--------GDLPVIVTGDFNGTVDSEPV-----TVLTEGGMKNACVT 220

Query: 238 PKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            K       +  +        +  ID+  +                 Y   D K     L
Sbjct: 221 AKVAYGPTWSFHDFGRIPVEKRRLIDFIFIKGA---------VEVERYRTIDDKPDNGYL 271

Query: 293 SDHCPISIDY 302
           SDH P+    
Sbjct: 272 SDHAPVMAIL 281


>gi|315185421|gb|EFU19193.1| Endonuclease/exonuclease/phosphatase [Spirochaeta thermophila DSM
           6578]
          Length = 311

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 94/299 (31%), Gaps = 39/299 (13%)

Query: 26  LVSWNINTLSEQEGVSLWKN--------SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           + ++N+  L +        +        + ++       + +  ++LDAD++ LQE+ + 
Sbjct: 25  VATYNVENLFDAVEDGAEYDEFRPSSFWTEEKVLVRLEAVSRVVRSLDADVLILQEVENE 84

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + ++         Y    L               +AV  +      + + L   + + 
Sbjct: 85  RVLGRLVSGYLADAGYRWHFLPEEEGA-------VHVAVLSRIPVEGVRVHALKDPRVAV 137

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  VE+   + G+++++  +HL S       +        L++++ + ++     
Sbjct: 138 ----LRSVVEVEYRLGGEQVFLFGVHLISRAGPAWRDEIRRNQLFLIARRLEEIRR---- 189

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS--RCNANKNLRNKI 255
                   ++ GDFN + + +     F + + P D    +           +        
Sbjct: 190 -TAPGAHVLVGGDFNMEADEVETF--FDRALFPQDVHSVWSMMVPGTMPSGSYWYEGRWE 246

Query: 256 PIDYFVMDQNAYK----FLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303
            ID F   +         +         +  D+               SDH P+ +   
Sbjct: 247 RIDGFFFTEGLRDGVGLDVTGGEVMAFPWLLDERGRPWSWDMGTGSGYSDHLPVKVILT 305


>gi|254458118|ref|ZP_05071544.1| endonuclease/exonuclease/phosphatase [Campylobacterales bacterium
           GD 1]
 gi|207084954|gb|EDZ62240.1| endonuclease/exonuclease/phosphatase [Campylobacterales bacterium
           GD 1]
          Length = 336

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 99/356 (27%), Gaps = 80/356 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLW----------KNSVKRTT 51
           ++  +L  VF     +    + + + ++N+  L + E                 + K   
Sbjct: 1   MKSLLLLFVFL---TSLFGDKILTIATYNVENLFDLEKKGYKYKEYEPNTKSNWNQKTYK 57

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                + +  K++DADI+ LQE+ S  A+  +         Y     I   K        
Sbjct: 58  IKLQNIARVIKDIDADIIALQEIHSLQALKDLRFTLKQNGLYYQYYSIADKKH-----TA 112

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             +A+  K      +   +            R  +E  ++I G  +++   H K+    +
Sbjct: 113 IKVAILSKLPFTYSKELSVTST------YKYRNILETKLKIYGNDLYMFVNHWKAKSGPE 166

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           S+  T + S      +                  V+ GDFN             K  D N
Sbjct: 167 SMRITSAKSLRNRISEI-----------GYDENIVLLGDFNSDYEEHIKFKKNRKLNDTN 215

Query: 232 D--------------------------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
                                          +         +      K  +D  ++ Q 
Sbjct: 216 GKTGINHVLRTIKQNQKASNTKYEKENLYNLWYDTDAPNRYSYIFRGEKEALDNIIVSQP 275

Query: 266 AYKF----LIQESFSEI---------------LYNEDDIKSRGKRLSDHCPISIDY 302
                    I +S + +               +  E   K +G   SDH P+   +
Sbjct: 276 LLDKKGISYINDSITNLDKEYLFKKKQIYRWQVSKERVPKHKGAGYSDHLPVIAKF 331


>gi|119383680|ref|YP_914736.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222]
 gi|119373447|gb|ABL69040.1| Exodeoxyribonuclease III [Paracoccus denitrificans PD1222]
          Length = 261

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 81/305 (26%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  +      D+V LQE+ + +     
Sbjct: 1   MKIATFNING----------------VRARIETLTGWLSEAQPDVVVLQEIKAQDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K               D  +R    
Sbjct: 41  ------GFPREPIADLGYNIETHGQKGFNGVAILSKLPLEDVSRGLPGDETDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V +  + + +  ++L +       +  Y  +        + L+        + +
Sbjct: 92  --IEATV-VGHRAVRIAGLYLPNGNPQPGPKFDYKLA------WMERLRARAKALLATEM 142

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P  + GD+N                       +     + +    +     +   S    
Sbjct: 143 PVAMMGDYNVIPESRDAAFPEKWLDDALFQPESRAALRRILFDGWADAVRLRHPGSTRGP 202

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   LI           D  +    + SDH P+
Sbjct: 203 FTFWDYQAGAWQRDNGIRIDHVLLSPQAADLLIDVGI-------DRDERAKDKPSDHVPV 255

Query: 299 SIDYD 303
            +D D
Sbjct: 256 WVDLD 260


>gi|299144741|ref|ZP_07037809.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
 gi|298515232|gb|EFI39113.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
          Length = 611

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 82/305 (26%), Gaps = 64/305 (20%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M + ++L  V   +    +    +RL+++NI   +  + +             +  +   
Sbjct: 4   MKKIFLLISVILFIFPVQAQ-HTLRLMTYNIKNANGMDDICS-----------FQRVANV 51

Query: 61  AKNLDADIVFLQEMGSYNAVAK---VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             N   D+V +QE+ S    ++   V  +                           I + 
Sbjct: 52  INNASPDVVAIQEVDSMTRRSRQKYVLGEIAERTQMHACFAPAIE----FEGGKYGIGLL 107

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            K V +  Q+ PL G      R   R  +    E           HL             
Sbjct: 108 TKQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHLSLTEED------- 150

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                   +  + +K  I   K+   P  +AGD N +                 +    F
Sbjct: 151 ------RMKSLEIVKSLIASYKK---PLFLAGDMNAEPESDFIK----------ELQKDF 191

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +   +       K  IDY    +         S   +              SDH P
Sbjct: 192 QILSNPEKHTYPAPAPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRP 242

Query: 298 ISIDY 302
           I ++ 
Sbjct: 243 ILVEL 247


>gi|255036462|ref|YP_003087083.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
 gi|254949218|gb|ACT93918.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
          Length = 265

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 80/283 (28%), Gaps = 49/283 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q+ +++++NI+  +                 D   + +       D V LQE+      +
Sbjct: 29  QRFKVMTYNIHHCNPPSAGD---------KIDVEAIAKVINAEKPDFVALQEVDVNTERS 79

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                    +   T      SK   +      +AV  K   V    Y L    +      
Sbjct: 80  GKGKNQAQQLAALTGMKFYFSKAIDHQGGDYGVAVLTKFPIVDSAKYALPIRPELKEEDR 139

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV + +  + +K+     HL                      QA+ +         +
Sbjct: 140 TIAAVTVQL-PDNRKLIFASTHLGLKEPN-------------RMLQAETI---WKHFGNT 182

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYF 260
            +P ++ GDFN   +                   +      + C     +   K  ID+ 
Sbjct: 183 ELPMILGGDFNATPDSPVI-----------AFFDQHFTRSCTNCKPTIPVEVPKKTIDFI 231

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +++          +  Y            SDH P++ ++ 
Sbjct: 232 MHKKDSQLKSANTKVIDEKY-----------ASDHLPVTAEFT 263


>gi|148240155|ref|YP_001225542.1| exodeoxyribonuclease III [Synechococcus sp. WH 7803]
 gi|147848694|emb|CAK24245.1| Exodeoxyribonuclease III [Synechococcus sp. WH 7803]
          Length = 276

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 84/304 (27%), Gaps = 63/304 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ SWN+N                   +    +  +      D++ LQE    + +   
Sbjct: 1   MRIASWNVN----------------SVRTRLEHVLGWLDRNTIDVLALQETKVDDPL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +   +         +  +A+  +   +        G     + A   
Sbjct: 42  -------FPLKPFQERGYHLSIHGQKSYNGVALISRQP-LEDVRLGFTGELPGDADAEAL 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              + ++      I V+++++ +   LDS + +Y             L+ ++   +    
Sbjct: 94  GTQKRVISALVDGIRVVNLYVPNGSSLDSEKYSYK------LNWMGCLERYLRAAETRDE 147

Query: 204 PFVIAGDFNRKINYLGNNDD-------FWKTIDPNDSLI-------RFPKEKDSRCNANK 249
           P  + GDFN        +D             +    +           +  +       
Sbjct: 148 PLCVVGDFNIGPEARDLHDPERLTGGIMASEAERKALVQVLGSNLGDAFRLFEPGSGHWS 207

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+  +  +  +     S        D  +   ++ SDH P+ +
Sbjct: 208 WWDYRSGAWNRDSGWRIDHIYISSDLQELARSCSI-------DKEERGREQPSDHAPVVV 260

Query: 301 DYDF 304
           D  +
Sbjct: 261 DLAW 264


>gi|330941805|gb|EGH44552.1| exonuclease III [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 270

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 82/314 (26%), Gaps = 78/314 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++VS+NIN L                 +    L         D++ LQE  +       
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + + +                 H  +A+  +N  +          +DS     
Sbjct: 45  AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHKGFEGDDEDSQK--- 89

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R       + NG+ + +++       F       +        +  + L+  +  +  +
Sbjct: 90  -RFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKRRFYENLQTLLEGQFRN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
             P ++ GD N                        ++L    ++ + +     +  F   
Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHL 203

Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                +       +             ID  +        + +          D      
Sbjct: 204 YPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSSGLQPRIKEAGV-------DYDLRGM 256

Query: 290 KRLSDHCPISIDYD 303
           ++ SDH PI ++  
Sbjct: 257 EKPSDHAPIWLELS 270


>gi|238751649|ref|ZP_04613139.1| Exodeoxyribonuclease III [Yersinia rohdei ATCC 43380]
 gi|238710211|gb|EEQ02439.1| Exodeoxyribonuclease III [Yersinia rohdei ATCC 43380]
          Length = 271

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 76/310 (24%), Gaps = 73/310 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ VS+NIN L                 +    L    +    D++ LQE         
Sbjct: 3   TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +FP               +         H  +A+  K   +  +       +D+      
Sbjct: 44  MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKEQPLAVRRGFPTDEEDA-----Q 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +   +      + V++       F       +        +    L+ ++ Q     
Sbjct: 92  RRIIMADIATPQGTLTVIN-----GYFPQGESRDHPIKFPAKQRFYADLQQYLEQHLSPE 146

Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
              +I GD N                          L     + + +     +  F    
Sbjct: 147 SQVLIMGDINISPTDLDIGIGEESRKRWLRTGKCSFLPEERAWLEHLQSWGLVDTFRAAN 206

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  Q      I           D      ++ 
Sbjct: 207 PDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYEIRGMEKP 259

Query: 293 SDHCPISIDY 302
           SDH P+  ++
Sbjct: 260 SDHAPVWSEF 269


>gi|77163525|ref|YP_342051.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|254436414|ref|ZP_05049919.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
 gi|300115646|ref|YP_003762220.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsoni C-113]
 gi|76881839|gb|ABA56521.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|207087948|gb|EDZ65222.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
 gi|299541588|gb|ADJ29899.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
          Length = 398

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 76/288 (26%), Gaps = 34/288 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
               AQ   + SWN   L   +              ++            D V LQE+ S
Sbjct: 14  PTISAQAFTIASWNTKHLGWGD------------KRNWNATAAVVAPY--DFVALQEVMS 59

Query: 77  YNAVAKVFPKNTWCIF--YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             AV  +           +S+        R        A   R++ V  +  +   L   
Sbjct: 60  KTAVNHLVQTLKKQTGVKWSSLVSGTSVGRSKRYQEFYAFIWREEAVDYVGGAVVYLDPG 119

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D F+    R       + +  K       +        +           +QQ     +W
Sbjct: 120 DIFA----REPFAARFQTDNGKYRWTAATVH------VVYGDSRDERRREAQQLDEYVNW 169

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P V+ GDFN   +  G  D   K + P                AN      
Sbjct: 170 LEENVAEGDPVVLMGDFNLPPDSAGFRD-LAKVLKPAIREGATTLSAKEGRYANLY---- 224

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              D      +A K                 K   K +SDH P+ I  
Sbjct: 225 ---DNIWYRPDALKIQEARIDRFPQRLGITHKLARKTVSDHAPVVIVL 269


>gi|134292654|ref|YP_001116390.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
 gi|134135811|gb|ABO56925.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
          Length = 603

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 94/315 (29%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R    Y         +    + LDAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTYEEFQRQEAKIVSALQALDADVIGLMEIQ 352

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         +       S  R+++    R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELGAVRQLAAKLGSHWRVVDPGTSRLGGDAIAVAMIYDSRTVE------PVGRAA 406

Query: 135 DSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +       G +  + +   HLKS    D+  +            +  ++
Sbjct: 407 TLAIDERNRQPLAQSFRRIGGRHALTIAVNHLKSKNCPDAANDDLDQGDGQGCWNATRTR 466

Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  L DW+       +    ++ GDFN   +         + ++         +   + 
Sbjct: 467 AAVKLADWLAGAPTGVAGQGTLLIGDFNSYTHEDPI-----RMLESRGYRNLVSRWIGAN 521

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIKS 287
             +         +D+ +        +       I  +E                      
Sbjct: 522 AYSYVYNGEAGYLDHALASLPLAAHVKAVHEWHINADEPLALQYTLAYKSADQQKTYYAP 581

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 582 DAYRSSDHDPVLIDI 596


>gi|307718261|ref|YP_003873793.1| endonuclease/exonuclease/phosphatase family protein [Spirochaeta
           thermophila DSM 6192]
 gi|306531986|gb|ADN01520.1| endonuclease/exonuclease/phosphatase family protein [Spirochaeta
           thermophila DSM 6192]
          Length = 311

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 94/299 (31%), Gaps = 39/299 (13%)

Query: 26  LVSWNINTLSEQEGVSLWKN--------SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           + ++N+  L +        +        + ++       + +  ++LDAD++ LQE+ + 
Sbjct: 25  VATYNVENLFDAVEDGAEYDEFRPSSFWTEEKVLVRLEAVSRVVRSLDADVLILQEVENE 84

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + ++         Y    L               +AV  +      + + L   +   
Sbjct: 85  RVLGRLVSGYLADAGYRWHFLPEEEGA-------VHVAVLSRIPVEGVRVHALKDPR--- 134

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             A  R  VE+   + G+++++  +HL S       +        L++++ + ++     
Sbjct: 135 -VAALRSVVEVEYRLGGEQVFLFGVHLISRAGPAWRDEIRRNQLFLIARRLEEIRR---- 189

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--NKI 255
                V  ++ GDFN + + +     F + + P D    +                    
Sbjct: 190 -TAPGVHVLVGGDFNMEADAVETF--FDRALFPQDVHSVWSMMVPGTMPPGSYWYEGRWE 246

Query: 256 PIDYFVMDQNAYK----FLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303
            ID F   +         +         +  D+               SDH P+ +   
Sbjct: 247 RIDGFFFTEGLRDGVGLDVTGGEVVAFPWLLDERGRPWSWDMGTGSGYSDHLPVKVILT 305


>gi|56460629|ref|YP_155910.1| extracellular nuclease [Idiomarina loihiensis L2TR]
 gi|56179639|gb|AAV82361.1| Extracellular nuclease [Idiomarina loihiensis L2TR]
          Length = 589

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 92/313 (29%), Gaps = 40/313 (12%)

Query: 20  VAQKVRLVSWNINTLSEQEGV------SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
             + +R+ S+N+       GV          ++ ++       +      +DAD++ L E
Sbjct: 284 SDKALRIASFNVLNFFNGNGVGQGFPTPRGADTPEQMQRQQKKIVAALTAIDADVIGLME 343

Query: 74  MGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + +      +A+ ++                  +++   + I   I  + + V+    + 
Sbjct: 344 IENDGFGERSAIMQLVKALEKASGKDYAIAEPRAEKIGTDQITVGIIYQPQRVKPNSHAI 403

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC-------FLDSLENTYSPSC 181
                  S+          +     GK+  V+  H KS           +S +N      
Sbjct: 404 FTRQGPFSWGSRPPLAQSFIDANT-GKEFSVVVNHFKSKGSCPEDSESPNSNQNDGQACW 462

Query: 182 SLLSQQ-AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           + L  Q ++ L  WI  +  +    V+ GDFN                            
Sbjct: 463 NDLRLQSSRELIQWIQSESLANS--VLLGDFNAYYQEDPVRYFADNGFYNPSGAKD---- 516

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------KR 291
                 +         +D+  +  +    + +        +E  +              R
Sbjct: 517 -----YSYVYDSQAGALDHVFVTDSLKDAIQEVYHLPFNADEPQLYDYRDEAYFAEGPFR 571

Query: 292 LSDHCPISIDYDF 304
            SDH P+ +D  F
Sbjct: 572 SSDHDPLVLDLVF 584


>gi|329902691|ref|ZP_08273242.1| hypothetical protein IMCC9480_801 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548636|gb|EGF33289.1| hypothetical protein IMCC9480_801 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 562

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 90/298 (30%), Gaps = 34/298 (11%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKVFPKNT 88
           +N  +         ++  +   D   L      LDAD++ L E+ +    ++A +     
Sbjct: 2   LNYFTTLNQRGANSSAELKRQRD--KLVSTIVALDADVLGLMEIENTATVSLADLVAAVN 59

Query: 89  WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                ST  L+N     ++  I  A+  +   V ++ Q   +    D     G R  V  
Sbjct: 60  AKTGASTYALVNSGTPGTD-AIKVAMIYKPARVSLIGQP-QVPADPDFGVDGGLRPPVAQ 117

Query: 149 LVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPSCS-----LLSQQAQWLKDWITQKKE 200
                 N    W +  HLKS      S  +               +QA  L  W+ Q   
Sbjct: 118 RFAAIDNNGSFWFVVNHLKSKGSCPSSASSVDRDDGQGCWNVSRVRQASALNKWVGQLVA 177

Query: 201 S--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           +      ++ GDFN  ++         KTI+         +   S             +D
Sbjct: 178 NSGEADVLMVGDFNAYLHEDPI-----KTIEAAGFEDLLKRLPASDRYTYVFNGESGALD 232

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------KRLSDHCPISIDYD 303
           + +        +   +   I  +E                     R SDH P+ +  +
Sbjct: 233 HGLASSKLSAQVTGVTVWHINADEPIALDYNTEFKTDDRYAVTPYRSSDHDPVLVGLN 290


>gi|120554411|ref|YP_958762.1| exodeoxyribonuclease III [Marinobacter aquaeolei VT8]
 gi|120324260|gb|ABM18575.1| Exodeoxyribonuclease III [Marinobacter aquaeolei VT8]
          Length = 270

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 68/285 (23%), Gaps = 59/285 (20%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +    L    + L+ D++ LQE    +                  R + +         
Sbjct: 12  RTRLHQLEAVIQQLNPDVIGLQETKVTDE----------EFPVEAIRELGYHVHFHGQKT 61

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           H  +A+  +              +DS      RR +     +NG+ + V++       F 
Sbjct: 62  HYGVALLSRAKPEQVIKGYPSDGEDS-----QRRLITGHFTVNGEPLTVIN-----GYFP 111

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------ 218
                 +        +    L  ++ +  +     ++ GD N                  
Sbjct: 112 QGESRDHPVKFPAKEKFYADLMAYLDELTKKPGHILVMGDMNISPTDRDIGIGADNAKRW 171

Query: 219 ---------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PID 258
                        ++   ++       F        N       +             ID
Sbjct: 172 LRSGKCSFLPEEREWLGQVEQRGFTDVFRHLHPDEANTFSWFDYRSKGFERDPRRGLRID 231

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +   +                        +R SDHCP+   +D
Sbjct: 232 LIMASDSLLPKAKAAGV-------SYDIRAMERPSDHCPVWASFD 269


>gi|324007120|gb|EGB76339.1| exodeoxyribonuclease III [Escherichia coli MS 57-2]
          Length = 272

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVTKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDGEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      I V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSPLGNITVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  F  
Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|300770191|ref|ZP_07080070.1| probable secreted protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300762667|gb|EFK59484.1| probable secreted protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 258

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 84/291 (28%), Gaps = 51/291 (17%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F +       Q ++++S+NI+  +      +          D   + +  +   AD+V L
Sbjct: 14  FTLCSPVFGQQPLKILSYNIHHGNPPSKPGV---------IDLEAIAKVIRTSGADVVGL 64

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+      ++   +       +       SK            +  K      +   L 
Sbjct: 65  QEIDVNVGRSENVDQAKKLAELAGMEYYFFSKGIDLEKGEYGTVILSKFPITNTERLELP 124

Query: 132 GAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                  ++  R      ++I  GK+I   + HL                      Q ++
Sbjct: 125 MP----VKSEMRSLGIAKIKIPSGKEILFANTHLDLK-------------EENRIAQTKF 167

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +   +   +++    V+ GD N +                ++    F   + +       
Sbjct: 168 I---VNHFQDTKHLVVLVGDLNAQPQSEPI-KILGNFFKRSEITNGFTIPEVNPTRE--- 220

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                 ID+ +++++           E  Y            SDH P+  +
Sbjct: 221 ------IDFIMVNKSKNPKFQNHKVIEESY-----------ASDHRPVYAE 254


>gi|296135895|ref|YP_003643137.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12]
 gi|295796017|gb|ADG30807.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12]
          Length = 253

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 80/301 (26%), Gaps = 74/301 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+LS                     +  + +    D++ LQE          
Sbjct: 1   MKIATWNVNSLS----------------VRLPQVLDWLQAQSPDVLALQET--------- 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++      +         +  +A+  +      Q              G  
Sbjct: 36  -KLTDERFPHAELLNAGYHSVCLGQPTYNGVALLSRREAAEVQR----------GIPGFE 84

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A   ++      + V+  +  +    DS +  Y        +    L+ W+  + +   
Sbjct: 85  DAQARVIAATFGDLRVIGAYFPNGQAPDSDKFAYK------MRWLDALQAWVATELQRHA 138

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              + GDFN         D                 +K +     +  F +  D    + 
Sbjct: 139 KVALMGDFNIAPEDRDVFDPVAWAGQIHCTPEERGHFKALLGLGLIDAF-RAFDQPPKSW 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++ +     L            D    + +R SDH P+ 
Sbjct: 198 SWWDYRNLAFRKNQGLRIDHILVSEGLRGSLQSCVI-------DKAPRKNERPSDHAPVI 250

Query: 300 I 300
            
Sbjct: 251 A 251


>gi|78185266|ref|YP_377701.1| exodeoxyribonuclease III xth [Synechococcus sp. CC9902]
 gi|78169560|gb|ABB26657.1| Exodeoxyribonuclease III [Synechococcus sp. CC9902]
          Length = 282

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 85/306 (27%), Gaps = 67/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   S    +  + +    D++ LQE    + +   
Sbjct: 1   MRIATWNVN----------------SVRSRLDQVLSWLEQAQPDLLCLQETKVDDPL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                                      +  +A+  +   +       +G  D    A   
Sbjct: 42  -------FPLQAFEAKGWRVHFHGQKSYNGVALVSRAP-LDDVRCGFVGELDKDPEAFEL 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              + ++      + V+++++ +   L S +  Y        +  + LK ++ Q  +   
Sbjct: 94  GEQKRVISALIDGVRVVNLYVPNGSSLTSDKYPYK------LKWLRCLKRYLEQPLQRGE 147

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P  + GDFN  +                      +     ++    L    +  +     
Sbjct: 148 PLCVVGDFNIALEARDMHDPDRLSGGIMASDPEREALQMALESG--LQDVFRVFEPDGGH 205

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  +              + +          ++ SDH P+
Sbjct: 206 WSWWDYRTGAWDRDRGWRIDHIYLCDELLGLARSCVIHKQV-------RGNEKPSDHAPV 258

Query: 299 SIDYDF 304
           S+D D+
Sbjct: 259 SVDLDW 264


>gi|224540445|ref|ZP_03680984.1| hypothetical protein BACCELL_05358 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517959|gb|EEF87064.1| hypothetical protein BACCELL_05358 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 364

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 89/328 (27%), Gaps = 55/328 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD----AD 67
             R+VS+N+  L +    +L  +              +       + +    +       
Sbjct: 40  SFRVVSYNVENLFDCRHDTLKNDYEFLPDAMRHWNYTKYKKKLDAIARVITAVGGWTPPA 99

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V L E+ + + +  +  ++          + N   +     I  A+  ++   +++   
Sbjct: 100 LVALCEVENDSVLRDLTQRSVLREAGYRYVMTNSPDQ---RGIDVALLYQRDQFKLISHQ 156

Query: 128 -YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
             P+            R  + +  + +N   + +  +HL S          Y    +   
Sbjct: 157 GIPIPHRSGKKKFRPTRDILHVCGMLLNSDTLDIFVVHLPSRSGGVKESEPYRLFAAE-- 214

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--------IDPNDSLIRF 237
            Q +   D I   +      +I GDFN   +    N              + P       
Sbjct: 215 -QLKAAVDSICSYRYHPQ-ILIMGDFNDYPDNASVNKILSAEAPPQNGDSLQPQKLYHLL 272

Query: 238 PKEK--DSRCNANKNLRNKIPIDYFVMDQNAYK--------FLIQESFS----------- 276
            ++        + K       +D+ ++     +            + F            
Sbjct: 273 ARKSAIRKHFGSYKYQGEWGLLDHIIVSGTLLQPDADFCTGEDKADVFHSSFLLTEDKKY 332

Query: 277 --EILYNEDDIKSRGKRLSDHCPISIDY 302
                +            SDH P+  D+
Sbjct: 333 GGVQPFRTYYGMKYQGGYSDHLPVWADF 360


>gi|223043633|ref|ZP_03613677.1| sphingomyelin phosphodiesterase [Staphylococcus capitis SK14]
 gi|222442911|gb|EEE49012.1| sphingomyelin phosphodiesterase [Staphylococcus capitis SK14]
          Length = 329

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 97/318 (30%), Gaps = 33/318 (10%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
             +LA         +     +++ + N+  L      +L+ N  +   +D      Y + 
Sbjct: 20  SLLLAFSTITYANESKSEDSLKITTHNVYFLPT----ALYPNWGQSQRADLISKADYIQ- 74

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIA 115
            D D+V   E+    A  ++         Y T  +   +                   + 
Sbjct: 75  -DQDVVIFNELFDKKASNRLLTNLQSQYPYQTPIVGKGTDGWQQTSGTYRKVKPVSGGVG 133

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  K   + Q+ + +        +AGN+    + +  NGK   ++  HL++    +    
Sbjct: 134 IVSKWPIIEQEQH-IYKKGCGADKAGNKGFAYIKINKNGKYQHIIGTHLQA----EDPIC 188

Query: 176 TYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                  +   Q   +K +I  +      P  I GD N  I            ++ +   
Sbjct: 189 IKGKDKKIRQSQMDEIKQFIKDKHIPKNEPIYIGGDLNV-IKGSEEYQQMSDNLNVSLPT 247

Query: 235 IRFPKEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                       +N   +          +DY ++D++  +     +    + + +     
Sbjct: 248 QFEGNAYSWDTQSNDIAKYNYPKLEPQHLDYILLDRDHAQPSSWHNKVHKVKSPEWSVKS 307

Query: 289 GKR------LSDHCPISI 300
             +       SDH P+S 
Sbjct: 308 WGKTYKYNDYSDHYPLSA 325


>gi|157376913|ref|YP_001475513.1| hypothetical protein Ssed_3781 [Shewanella sediminis HAW-EB3]
 gi|157319287|gb|ABV38385.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 381

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/346 (10%), Positives = 96/346 (27%), Gaps = 63/346 (18%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            ++ +++ ++N+    E  G         + ++       +  Y      D++  QE+ +
Sbjct: 34  ASELIKIATFNLFNFIEPPGAFYEFENIYTQEQWQKKLDWIATYINEHQPDVIGFQEVFT 93

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPLLGA 133
            +A+A++  +     +++             +    A+A R        V          
Sbjct: 94  PDALAQL-TQRCGLEYFAVLDTPEVVDDFIYSKPVVALASRYPITEVHNVTVGDGWASMM 152

Query: 134 KDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLEN----------------- 175
                   +R+ + + + +          +H KS   L   +                  
Sbjct: 153 GLQDDFGFSRKPLRVTISLPKLGSCDCYVVHFKSKRPLFDAQELNGLTTPSADSSGGNVG 212

Query: 176 --------TYSPSCSLLSQQAQWLK-DWITQKKESLVPFVIAGDFNRKINY--------- 217
                       S      +A  L+   + ++ ++  P V+ GDFN  ++          
Sbjct: 213 QLLSIEALAQWGSSIQRGCEAALLRYSMVERRTQTGNPMVLMGDFNDILSDGVLASLTSV 272

Query: 218 ------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN--------ANKNLRNKIPIDYFVMD 263
                      +    +  +     +   + S+ +         +        +DY ++ 
Sbjct: 273 DTRIKPDPLLGEVEHQLRDHRLKDAYELYQSSQYSLSCQQRPATHYYFAKGSVLDYILLS 332

Query: 264 QNAYKFLIQESFSEILYNEDD------IKSRGKRLSDHCPISIDYD 303
                   +       Y   D         R  + +DH P+ I   
Sbjct: 333 SEFDIKNSRSLAEVGRYETYDRHLINPRFERDSQSTDHAPVMITIS 378


>gi|83953786|ref|ZP_00962507.1| exodeoxyribonuclease III [Sulfitobacter sp. NAS-14.1]
 gi|83841731|gb|EAP80900.1| exodeoxyribonuclease III [Sulfitobacter sp. NAS-14.1]
          Length = 265

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 67/307 (21%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +++ ++NIN                   +    L Q+  +   D+  LQE+ S   
Sbjct: 2   QGAAMKIATFNING----------------IKARIDALPQWLDDAQPDVAILQEIKS--- 42

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           V + FP+  +           ++           +A+  K               D  +R
Sbjct: 43  VDEGFPRELF-------EDRGYNVETHGQKSFNGVAILSKLPLEDVTRGLPGDDSDEQAR 95

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                 +E  V  +   + +  ++L +       +  Y  +        Q L+D      
Sbjct: 96  Y-----IEATVVGDHSSVRLCGLYLPNGNPAPGPKYDYKLA------WMQRLEDRARALL 144

Query: 200 ESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
               PF++ GDFN                   +   +   W+ +        F       
Sbjct: 145 AEETPFLLTGDFNIIPQAEDAATPDAWREDALFRPESRAAWRRLLALGLTEAFRARTQGP 204

Query: 245 CNANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            + +            N I ID+F++       L            D      ++ SDH 
Sbjct: 205 GHYSFWDYQAGAWNRNNGIRIDHFLLSPAIADSLRDCQI-------DKDVRGREKPSDHV 257

Query: 297 PISIDYD 303
           P+ ++ D
Sbjct: 258 PVWVELD 264


>gi|326798265|ref|YP_004316084.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326549029|gb|ADZ77414.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 259

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 98/309 (31%), Gaps = 59/309 (19%)

Query: 1   MI--RKYVLALVFFLVPCTA----SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M+  R  ++  +  L+        S  QK++++S+NI+  ++                  
Sbjct: 1   MMQARNVIMIFIALLLLIVQVERISAQQKLKIMSYNIHHGADAN-----------EQDQL 49

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             +  + K   ADIV LQE+ S    +    +       +      +++  + +      
Sbjct: 50  EAMAAFIKESGADIVGLQEVDSMCRRSGNVDQPRVLAQKTGM-HYTYTRHFAYDGGSYGQ 108

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       +  L  +  + +       V        + + +  +HL          
Sbjct: 109 ALLSRFPIERTVNERLPVSTGATTSFLTAEVVV----PTHRTLSIGVVHLDY-------- 156

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                + +   +QA+ +   I    ++  PF++ GD N +  +        + I      
Sbjct: 157 ----RAEAGRLRQAEIIDSIIK---KASHPFILTGDMNAEPQHETLAVLSKQLIATQGR- 208

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                              K  IDY ++D+     +I+     +L+            SD
Sbjct: 209 ---------DAFTYPTAPPKKKIDYIMLDKRLKASVIEAKVLPVLF------------SD 247

Query: 295 HCPISIDYD 303
           H PI    +
Sbjct: 248 HLPIVSTIE 256


>gi|114047106|ref|YP_737656.1| PKD domain-containing protein [Shewanella sp. MR-7]
 gi|113888548|gb|ABI42599.1| PKD domain containing protein [Shewanella sp. MR-7]
          Length = 948

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/337 (12%), Positives = 92/337 (27%), Gaps = 56/337 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADI 68
               +    +++ S+N+      +G      + +              +      + AD+
Sbjct: 451 SPVLAEGGNLKVASFNVLNYFNGDGQGGGFPTARGANTLSEFERQKAKIVSAMVGISADV 510

Query: 69  VFLQEMGSYNA------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
             L E+ +               +     +N +          N S   ++  I   +  
Sbjct: 511 FGLMEIENDGFGANSAIADLVAGLNAAVGENRYDYVIPKVNGSNLSAIGTD-AITVGLIY 569

Query: 117 RKKNV-------RVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK--- 165
           R   V        +   + PL    +  F  + NR  +     +NG +  V+        
Sbjct: 570 RSDKVSPQGDARILSSANSPLDDAGQPLFDDSKNRPMLTQAFALNGSEESVVVAVNHLKS 629

Query: 166 --SFCFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
             S C  D   N    +C+   ++ A     WI  +       ++ GD N          
Sbjct: 630 KGSECAGDPDMNDGQGNCNITRTRAATAAGQWIAAQYPE-QGVLLIGDLNSYAKEDP--- 685

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                +        F K + +   +         +D+ + +      ++  +   I  +E
Sbjct: 686 --LSALANAGFSELFAKLEKANPYSYVFSGESGQLDHALANAALVDKVLDVTEWHINTDE 743

Query: 283 DDIKSRG-----------------KRLSDHCPISIDY 302
             +                      R SDH P+ I  
Sbjct: 744 PRVLDYNEEFKTAAQVQDLYASDAYRSSDHDPVVISL 780


>gi|227821924|ref|YP_002825894.1| exodeoxyribonuclease III protein [Sinorhizobium fredii NGR234]
 gi|227340923|gb|ACP25141.1| exodeoxyribonuclease III protein [Sinorhizobium fredii NGR234]
          Length = 319

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 88/306 (28%), Gaps = 69/306 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ +WNIN                   +    L  + K  + DI  LQE+ S +    
Sbjct: 59  PMKIATWNING----------------VKARLDGLVAWLKASNPDIACLQEIKSVDDA-- 100

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                           + +            +A+  K               D  SR   
Sbjct: 101 --------FPREEIEALGYHIETHGQKGFNGVALLSKLRPDEVNRGLPGDDSDEQSRF-- 150

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +E +  + G  + V  ++L +   + + +  Y           Q L  +  ++    
Sbjct: 151 ---IEGVFSVAGGAVRVCCLYLPNGNPVGTEKYPYK------LGWMQRLASFAKERLLLE 201

Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++AGD+N                   +L      ++ +  N  L    +        
Sbjct: 202 EPLILAGDYNVIPEAHDCWDVNVWRNDALFLPETRAAFRQL-RNLGLTDAVRATTDEVPL 260

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   L+  S  + +          ++ SDH P+
Sbjct: 261 YSFWDYQAGCWQKNFGIRIDHLMLSPEAVDKLVSTSIEKHV-------RAWEKPSDHVPV 313

Query: 299 SIDYDF 304
           +  + F
Sbjct: 314 AAQFAF 319


>gi|152969774|ref|YP_001334883.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|330012539|ref|ZP_08307413.1| exodeoxyribonuclease III [Klebsiella sp. MS 92-3]
 gi|150954623|gb|ABR76653.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|328533786|gb|EGF60471.1| exodeoxyribonuclease III [Klebsiella sp. MS 92-3]
          Length = 268

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 79/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVARLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +   Q L++++  +     
Sbjct: 90  RIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELNKEN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  + +   
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLGWGLVDTWRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 DNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-------DYEIRGMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|33861041|ref|NP_892602.1| exodeoxyribonuclease III [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|33639773|emb|CAE18943.1| exodeoxyribonuclease III [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 281

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 89/304 (29%), Gaps = 69/304 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   +  + +  + K ++ DI+ LQE      +   FP
Sbjct: 3   IATWNVN----------------SVRTRLSQIINWIKEVNPDILCLQE---TKVIDDAFP 43

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRAGN 142
            + +           +         +  +A+  K      +            S      
Sbjct: 44  SSHFEEL-------GYEVIIHGQKSYNGVAIISKFKIENVKKGFTNENKTGGISIDINEQ 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +R +   +      + ++++++ +   +DS +  Y        Q   +L  ++  + ++ 
Sbjct: 97  KRLISAEIN----GLKIINVYVPNGSSIDSEKYDYK------IQWLNYLSAFLDDQVKND 146

Query: 203 VPFVIAGDFNRKINYLGNNDD-------FWKTIDPN-------DSLIRFPKEKDSRCNAN 248
               + GDFN   + +  +             I+            I   +  +      
Sbjct: 147 DLVCLVGDFNIAPSEIDIHTPQKYEGGIMASKIEREALNNVLKGRFIDSFRIFEKNTGHW 206

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+  + +N    L            +  +    + SDH P+ 
Sbjct: 207 SWWDYRNNAYELNKGWRIDHIYISKNLSSKLKSCVI-------ERNQRENLQPSDHAPVL 259

Query: 300 IDYD 303
           I+ +
Sbjct: 260 INLE 263


>gi|222085777|ref|YP_002544307.1| exodeoxyribonuclease III protein [Agrobacterium radiobacter K84]
 gi|221723225|gb|ACM26381.1| exodeoxyribonuclease III protein [Agrobacterium radiobacter K84]
          Length = 263

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 92/306 (30%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+ D DI  LQE+ +   V + 
Sbjct: 1   MKIATWNING----------------VKARIENLCQWLKDSDPDIACLQEIKT---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  K               D  +R    
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKAKPDEVTRGLPGDDSDEQARF--- 91

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +E +  +     + V  ++L +   +D+ +  Y  +        + L+ +   +    
Sbjct: 92  --IEAVFSVPDHGALRVCCLYLPNGNPVDTEKYPYKLA------WMERLRKFAADRLALE 143

Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++AGD+N                   +L      ++ ++ N       +        
Sbjct: 144 EPIILAGDYNVIPEPHDCFDPKVWENDALFLPQTRQAFRQLE-NLGFTDAVRTTTDAVKL 202

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   L   +  +            ++ SDH P+
Sbjct: 203 YSFWDYQAGAWPKNNGIRIDHLMLSPEAADRLTSTAIEKH-------MRAWEKPSDHVPV 255

Query: 299 SIDYDF 304
               DF
Sbjct: 256 IAHLDF 261


>gi|152980157|ref|YP_001354134.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille]
 gi|151280234|gb|ABR88644.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille]
          Length = 254

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 83/303 (27%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      + Q+  +   D++ LQE  + N     
Sbjct: 1   MKIATWNVNSL----------------KVRLPQVLQWLTDNPVDVLCLQETKTVNE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  ++                F     R
Sbjct: 41  ------KFPLAEIEAAGYHVVYTGQKTYNGVAILSRHPIDDVVKN-----NPLFDDEHQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  +     + + ++  ++ +   L+S +  Y        +    L + +  + +   
Sbjct: 90  IIIGTI-----QGVRIICAYIPNGQSLESDKYQYK------LRWLAGLHELLAHELKQHE 138

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
              + GD+N        +D      + +                     +  +       
Sbjct: 139 NVALLGDYNIAPEDRDVHDPVAWQGQVLVSEPERAAFVRMQEMGFTDAFRMFEQAEKLYS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++  +  K              D +  + ++ SDH P+  
Sbjct: 199 WWDYRQMGFRLNRGLRIDHILLSPSLAKRCTACVI-------DKVPRKWEQPSDHTPVIA 251

Query: 301 DYD 303
             D
Sbjct: 252 TLD 254


>gi|331647243|ref|ZP_08348337.1| exodeoxyribonuclease III [Escherichia coli M605]
 gi|331044026|gb|EGI16162.1| exodeoxyribonuclease III [Escherichia coli M605]
          Length = 272

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPISVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      I V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSPLGNITVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  F  
Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|302186191|ref|ZP_07262864.1| exonuclease III [Pseudomonas syringae pv. syringae 642]
          Length = 270

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 82/314 (26%), Gaps = 78/314 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++VS+NIN L                 +    L         D++ LQE  +       
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + + +                 H  +A+  +N  +          +DS     
Sbjct: 45  AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHKGFEGDDEDSQK--- 89

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R       + NG+ + +++       F       +        +  + L+  +  +  +
Sbjct: 90  -RFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLESQFRN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
             P ++ GD N                        ++L    ++ + +     +  F   
Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKSWGLVDTFRHL 203

Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                +       +             ID  +        + +          D      
Sbjct: 204 YPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKEAGV-------DYDLRGM 256

Query: 290 KRLSDHCPISIDYD 303
           ++ SDH PI ++  
Sbjct: 257 EKPSDHAPIWLELS 270


>gi|163857201|ref|YP_001631499.1| putative exodeoxyribonuclease III [Bordetella petrii DSM 12804]
 gi|163260929|emb|CAP43231.1| putative exodeoxyribonuclease III [Bordetella petrii]
          Length = 260

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L                      +  +      D + LQE          
Sbjct: 1   MKLATWNVNSL----------------KVRLPQVLDWLAANPVDALCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +    +    +  +A+  +                       +
Sbjct: 35  LKLTDENFPLDAFTQLGYHAAWAGQKTYNGVAILSREPGAAMVRNI------PGMDDPQQ 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + + +      + V+  +  +   L+S +  Y           Q L+DW+ Q+ ++  
Sbjct: 89  RLLAVTLPSPAGDVRVISAYCPNGQALESDKYAYK------LNWFQQLRDWLAQEIQTYP 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GD+N                           ++ +        F +  +    + 
Sbjct: 143 RLALLGDYNVAPADEDVHNPAKWEGQVLVSEPERAAFRALLDLGLADSF-RLFEQPEKSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++ Q      +           D      ++ SDH P+ 
Sbjct: 202 SWWDYRQFAFRRNAGLRIDHILLSQPLVPHCVACVI-------DKAPRANEQPSDHAPVV 254

Query: 300 IDY 302
              
Sbjct: 255 ATL 257


>gi|73540148|ref|YP_294668.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
 gi|72117561|gb|AAZ59824.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
          Length = 262

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 98/286 (34%), Gaps = 51/286 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
           K+R+V++NI+             +          +R     +DADIVFLQE+   N    
Sbjct: 3   KLRVVTYNIH----------KGVTGIARRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLV 52

Query: 80  VAKVFPKNTWCIFY---STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            A +F  +   + Y    +     + +       H   A+  ++  ++ ++  +     S
Sbjct: 53  AAALFDPDHTQLNYLATDSYPHSVYGRNAVYEHGHHGNAILSRHPILMSENLDI-----S 107

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R   R  +  + ++NG +  ++ +H   F                 ++QA+ L + + 
Sbjct: 108 DHRFEQRGLLHAVADVNGVEAHLICVHFGLF-------------ARSRARQAEALVERVR 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               S  P VIAGDFN   +           I      +     + +R +   +      
Sbjct: 155 TVVPSTAPLVIAGDFNDWNHR------LDSQICNTLGAVEASHARGARLHTFPSHMPWWQ 208

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +            F     +    +   +R SDH P+  + 
Sbjct: 209 LDRIYVRG----------FEIERAHALTGRDWAQR-SDHVPLVAEL 243


>gi|119899170|ref|YP_934383.1| exodeoxyribonuclease III [Azoarcus sp. BH72]
 gi|119671583|emb|CAL95496.1| exodeoxyribonuclease III [Azoarcus sp. BH72]
          Length = 253

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 80/302 (26%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  +      D + LQE          
Sbjct: 1   MKIATWNVNSL----------------KVRLPHVLDWLAANQPDALCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  +   ++   +    +  +A+   +                      +
Sbjct: 35  LKLEDKGFPVAELQAAGYNAVFNGQKTYNGVAILSPHPLEDVVR------DIPGFSDEQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + ++  +  +   + S +  Y        +    L +W+  +  +  
Sbjct: 89  RIIAATVN----GVRIVCGYFPNGQAVGSDKFEYK------LRWLGALTEWLRAELTAHP 138

Query: 204 PFVIAGDFNRKINYLG-------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             V+ GDFN                         +  +     +  F +  D    A   
Sbjct: 139 RLVLGGDFNIAPEDRDAHPDWKDEIHVSAPERAAFTALTALGLVDAF-RLYDQPERAFSW 197

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ++          ID+ ++           +        D    + +R SDH P+ +D
Sbjct: 198 WDYRMGAFRRNFGLRIDHLLVSPALQPACRACTV-------DKAPRKLERPSDHAPVVLD 250

Query: 302 YD 303
            +
Sbjct: 251 LE 252


>gi|304411405|ref|ZP_07393019.1| PKD domain containing protein [Shewanella baltica OS183]
 gi|307305273|ref|ZP_07585021.1| PKD domain containing protein [Shewanella baltica BA175]
 gi|304350260|gb|EFM14664.1| PKD domain containing protein [Shewanella baltica OS183]
 gi|306911576|gb|EFN42001.1| PKD domain containing protein [Shewanella baltica BA175]
          Length = 944

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 97/326 (29%), Gaps = 50/326 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADIVFLQEM 74
              +++ S+N+      +G      + +              +      + AD+  L E+
Sbjct: 457 GGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFDRQKAKIVSAMVGISADVFGLMEI 516

Query: 75  GS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNV------ 121
            +      +A+A +       +  +    I  +       + I   +  R   V      
Sbjct: 517 ENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGMNAIGTDAITVGLIYRSDKVTPQGAA 576

Query: 122 -RVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSF---CFLDSLE 174
             +   + PL    K  F  + NR  +     +NG +  + V   HLKS    C  D   
Sbjct: 577 RILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLKSKGSECAGDPDL 636

Query: 175 NTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           N    +C+   ++ A     WI+++       ++ GD N               +     
Sbjct: 637 NDGQGNCNITRTRAATAAGQWISEQYP-DQGVLLIGDLNAYAKEDP-----LTALGNAGF 690

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---- 289
              F K +     +         +D+ + +      ++  +   I  +E  +        
Sbjct: 691 SELFAKLEKPNPYSYVFSAESGQLDHALANAALLDKVVDVTEWHINTDEPRVLDYNEEFK 750

Query: 290 -------------KRLSDHCPISIDY 302
                         R SDH P+ I  
Sbjct: 751 TPAQIQDLFATDAYRSSDHDPVVISL 776


>gi|288935952|ref|YP_003440011.1| exodeoxyribonuclease III [Klebsiella variicola At-22]
 gi|288890661|gb|ADC58979.1| exodeoxyribonuclease III [Klebsiella variicola At-22]
          Length = 268

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 80/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K+  +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKDTPIAVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +   Q L++++  +     
Sbjct: 90  RIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELNKEN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  + +   
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLGWGLVDTWRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 DNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVETGI-------DYEIRGMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|260597606|ref|YP_003210177.1| exonuclease III [Cronobacter turicensis z3032]
 gi|260216783|emb|CBA30234.1| Exodeoxyribonuclease III [Cronobacter turicensis z3032]
          Length = 268

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 79/311 (25%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFISFNINGL----------------RARPHQLAALVEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   V  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPVSVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       ++      ++  Q L+D++     +  
Sbjct: 90  RIIMAEIPSAIGDITVIN-----GYFPQGESRDHAVKFPAKAKFYQDLQDYLETALSNDK 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N                               +   + ++       F    
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEESRKRWLRTGKCSFLPEEREWMGRLLN-WGLKDTFRHAN 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +        L++          D      ++ 
Sbjct: 204 PDITDRYSWFDYRSKGFDDNRGLRIDLLLASDPLMARLVETGI-------DYDIRAMEKP 256

Query: 293 SDHCPISIDYD 303
           SDH P+   + 
Sbjct: 257 SDHAPVWATFS 267


>gi|26398005|sp|P59116|PHL2_LEPIN RecName: Full=Sphingomyelinase C 2; AltName: Full=Sphingomyelin
           phosphodiesterase 2; Short=SMase 2; Flags: Precursor
          Length = 623

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 95/293 (32%), Gaps = 25/293 (8%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++S N+  L     +  W N      +       Y K  + D++  +E    +A   
Sbjct: 154 EIKVLSHNVFMLPTN--LPRWGNLGHDERAKRISKSDYVK--NQDVIVFEEAFDTSARKI 209

Query: 83  VFPKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T            +     S + ++  + +  K     +  Y    + 
Sbjct: 210 LLDNLREEYPYQTDVVGRTKKNWDASLGNFRSYSLVNGGVVILSKWPIEEKIQYIFNDSG 269

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  N+  V + +   GKK  V+  H +S       +N  +      + Q   ++++
Sbjct: 270 CGADWFANKGFVYVKINKEGKKFHVIGTHAQS-----QDQNCSNLGIPNRANQFDDIRNF 324

Query: 195 I-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANK 249
           I ++        +I GD N         D   +        +  P   D++ N       
Sbjct: 325 IYSKNIPKDETVLIVGDLNVIKESNEYYDMISRLNVNEPRYVGVPFTWDAKTNEIAAYYY 384

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPIS 299
                + +DY  + ++  +  + ++ +    ++      G      SDH PI 
Sbjct: 385 ENEEPVYLDYIFVSKSHAQPPVWQNLAYDPVSKQTWTVSGYTSDEFSDHYPIY 437


>gi|115372829|ref|ZP_01460134.1| putative hemagglutinin-related protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|310818499|ref|YP_003950857.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|115370096|gb|EAU69026.1| putative hemagglutinin-related protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309391571|gb|ADO69030.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 526

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 91/291 (31%), Gaps = 26/291 (8%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + +WN+             +         + +R    +   D   LQE+ +   +A+
Sbjct: 248 PLSVGNWNLEWFGSTTNGPSDDSLQ------LSNVRAVMADAGIDFWALQEVVNAGTLAQ 301

Query: 83  V-FPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +      +  F + +  + +     + ++   A+  +   V+VL     L      F+  
Sbjct: 302 LKQAMPGYDGFAANDSRVIYGASYYTASEQKPAVLFKSGTVQVLTAEIILTHFNYEFAGR 361

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                + L V      + +  I L        +++      +        LK ++  +  
Sbjct: 362 PP-LQLRLRVTRGNTSLEMFAIILHMKAQTGGIDDYNQRKAAG-----AALKQYLDSQLS 415

Query: 201 SLVPFVIAGDFNRKINYLGNND-------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
             V  ++ GD+N  ++     D        +   ++   S         S       +  
Sbjct: 416 -NVRVIVLGDWNDDVDISIYRDSGSYLPSPYQNFVEAPASYQFLTM-PLSVSGVGSTVGY 473

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++    +   +  S   +      I +     SDH PI   +DF
Sbjct: 474 STFIDHQLISNELFGDYVGNSTQVLY---PAIPNYANTTSDHYPIQSRFDF 521


>gi|227885825|ref|ZP_04003630.1| exodeoxyribonuclease III [Escherichia coli 83972]
 gi|301050910|ref|ZP_07197761.1| exodeoxyribonuclease III [Escherichia coli MS 185-1]
 gi|26108407|gb|AAN80609.1|AE016761_184 Exodeoxyribonuclease III [Escherichia coli CFT073]
 gi|227837398|gb|EEJ47864.1| exodeoxyribonuclease III [Escherichia coli 83972]
 gi|300297429|gb|EFJ53814.1| exodeoxyribonuclease III [Escherichia coli MS 185-1]
 gi|307553768|gb|ADN46543.1| exodeoxyribonuclease III [Escherichia coli ABU 83972]
          Length = 272

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 84/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +    S  +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFSAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  F  
Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|253997518|ref|YP_003049582.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8]
 gi|253984197|gb|ACT49055.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8]
          Length = 256

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 84/303 (27%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L+                     +  +      D++ LQE    ++    
Sbjct: 1   MKLATWNVNSLN----------------VRLPHVLDWLTANQPDVLCLQETKQEDS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y+    + +         +  +A+  ++  +  Q        D        
Sbjct: 41  ------KFPYAAFSELGYHAVHIGQKTYNGVAILSRHPILNVQRNIPDFEDDQQR----- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++  +   + ++  ++ +   +DS +  Y        +    L  W+  +     
Sbjct: 90  -----VLAADINGVRMVCAYIPNGQAVDSDKYQYK------MRWLSALNAWLKTELTQHA 138

Query: 204 PFVIAGDFNRKINYLGNNDDFW-------KTIDPNDSLIRF-------PKEKDSRCNANK 249
              + GD+N        +D            ++                +  +    +  
Sbjct: 139 KLALLGDYNIAPEDRDCHDPAAWEGQILVSPLEREAFNHLVSLGLSDSFRLFEQPEKSFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D    + +R SDH P+ +
Sbjct: 199 WWDYRMMGFRRNLGMRIDHILVSDALKVLCAAAYI-------DKAPRKLERPSDHTPVVL 251

Query: 301 DYD 303
           + +
Sbjct: 252 ELN 254


>gi|333031148|ref|ZP_08459209.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
 gi|332741745|gb|EGJ72227.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
          Length = 261

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 95/311 (30%), Gaps = 64/311 (20%)

Query: 1   MIR-KYVLALVFFLVPCTASVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M + K +L+L+  L          +R+  +++N+                    +    +
Sbjct: 1   MKKIKIILSLLLVLCSGIVFAQDTIRVRVMTYNLRFG---------------ELASMEEI 45

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTA 113
            Q+ K+ + D V LQE+ S     +   ++         Y T     + K       +  
Sbjct: 46  AQHIKSFNPDFVALQEVDSKTYRKRTPHQHGVDFLGELAYHTGMFGIYGKTIDYASGYYG 105

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           I +  K   +  +   L   ++   R   R  +E L E+    I     HL +       
Sbjct: 106 IGILSKYSYITTKKTMLPKTEE---RLEQRALLEGLFEVGNDTIVFASTHLDAM------ 156

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 S    S Q   +K  +   + S  P ++ GDFN +                   
Sbjct: 157 ------SDETRSIQFDKIKKCL---EASQYPVLLGGDFNTRSTSSLIKKM---------- 197

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +    DS      + +    IDY               + +  +     ++    LS
Sbjct: 198 -DNWFLGTDSDFGI-PSWKPIAKIDYIF------------GYPQKGWEIISTQTIQSLLS 243

Query: 294 DHCPISIDYDF 304
           DH PI  +  +
Sbjct: 244 DHMPIITELIY 254


>gi|149377356|ref|ZP_01895101.1| extracellular nuclease, putative [Marinobacter algicola DG893]
 gi|149358368|gb|EDM46845.1| extracellular nuclease, putative [Marinobacter algicola DG893]
          Length = 588

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 83/312 (26%), Gaps = 35/312 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           +  +R+V+ N+      +G            S  +       L       D DI+ + EM
Sbjct: 282 SATLRVVTLNLGNFFNGDGRGGGFPAARGAQSATQFEQQKARLVASLTIPDPDILAVTEM 341

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +                    R ++ +    ++ I T +  R   V     +  L    
Sbjct: 342 ENDGYEGDSAIAELARALGPHWRYVDTNNNTGSDAIRTDLLYRSDRVVAEGSASRLTTTP 401

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF-----LDSLENTYSPSCSLLSQQA- 188
               R     A       + + + ++  HLKS         +  ++      S   +QA 
Sbjct: 402 F-DRRGRPPVAQIFRPINSDRALRIVVPHLKSKACRGAKGPNRDQDDGQGCYSHRREQAT 460

Query: 189 QWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-- 244
           + +  W             +I GD N             + ++    +            
Sbjct: 461 RAIIRWTHALPHPNGLAGTMITGDMNAYAREAP-----LQLLEAAGFINTVHHFHGCTDT 515

Query: 245 ---CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------KR 291
                + +       +DY ++       ++      I  +E                  R
Sbjct: 516 SCKHTSYRYHGRSGTLDYSLVSNGLLPQIVGAHTWSINSDEPRALGYKGPVTLPTGQPWR 575

Query: 292 LSDHCPISIDYD 303
            SDH P+  D  
Sbjct: 576 SSDHNPVITDLS 587


>gi|149371411|ref|ZP_01890897.1| extracellular nuclease [unidentified eubacterium SCB49]
 gi|149355549|gb|EDM44108.1| extracellular nuclease [unidentified eubacterium SCB49]
          Length = 1580

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 82/328 (25%), Gaps = 44/328 (13%)

Query: 16   CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                V    ++ S+N+             ++ + T      +      ++AD+V L E+ 
Sbjct: 990  TPPEVGGTFKVASFNVLNYFTTIDSRGADSAAELTRQR-EKIAAAICAMNADVVGLIEIE 1048

Query: 76   SYNAV---AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLL 131
            +   V     +          +       +    +++I  A       V V    +    
Sbjct: 1049 NNGTVAINDLLNGTGGINDTCTATYAAVDTGAFGDDEIAMAFIYNTATVTVEGAHAILDS 1108

Query: 132  GAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSC------SL 183
                 F    NR A+    +      KI V+  H KS        N    +         
Sbjct: 1109 SVDPRFLDTKNRPALAQTFKEIATNAKITVIVNHFKSKGSACDDVNDPDLNDGAGNCNIT 1168

Query: 184  LSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF 237
             ++ A  L DW+           F+I GD N                      +D     
Sbjct: 1169 RTEAAAALVDWLATDPTNSEDPDFLIIGDLNSYKKETPITAIIAGADDTVGTSDDYTDLL 1228

Query: 238  PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------- 289
                     +         +DY +   N    +       I  +E  +            
Sbjct: 1229 ENFSGDDAYSYVFDGQLGYLDYSLASNNLLSQITGTISWNINADEISVLDYNDGIQDAGE 1288

Query: 290  -----------------KRLSDHCPISI 300
                              R SDH PI +
Sbjct: 1289 SSFERESNALPIYESNMFRASDHDPILV 1316


>gi|172058551|ref|YP_001815011.1| endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum
           255-15]
 gi|171991072|gb|ACB61994.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum
           255-15]
          Length = 915

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/328 (10%), Positives = 70/328 (21%), Gaps = 58/328 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +   ++ + S+N+   +                     +  + K    DIV L EM
Sbjct: 517 TNIETGDSRLTVASYNVENFASTADAGKVDRVS-------EGIATFLKT--PDIVGLTEM 567

Query: 75  GSYNAVAKV-----------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
              +                              +                +I       
Sbjct: 568 QDNDGATDSGTVDASKSFETLIAAIEAKTGVRYAYTDIAPEDKKDGGQPGGNIRVGFLYN 627

Query: 118 KKNVRVLQ-----------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
              V +                    + P     +  +   +R+ +       G+   V+
Sbjct: 628 PARVSLAPGVKGTATQAVAVENGKLTNNPGRIQPNDPNFDSSRKPLVGEFIFKGESYHVI 687

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES------LVPFVIAGDFNRK 214
             H  S     +      P       Q   +   +                V+ GD N  
Sbjct: 688 VNHFNSKGGDGADFGKNQPVVRKSEVQRHAIAGIVQNFVNELETEVKDSNVVVLGDLNDF 747

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                        +  ++          S   +     N   +D+ ++ +N   +   + 
Sbjct: 748 QFSK-----TLDILKGDNLWNTVEDLPKSERYSYVYNGNAQVLDHVLISKNLKPYTSSDI 802

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +       D        SDH P  I  
Sbjct: 803 VNI----NSDYMEADGSASDHDPAIISI 826


>gi|197123156|ref|YP_002135107.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K]
 gi|196173005|gb|ACG73978.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K]
          Length = 296

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 86/291 (29%), Gaps = 38/291 (13%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +  ++VR+VSWN++ L +    ++         +     +    +      LDAD+V LQ
Sbjct: 34  TAGERVRIVSWNVHDLFDDVDRTVPPGALDTVATADEVEAKLARVAAVLARLDADLVLLQ 93

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ +      +  +  +      E                 +AV  +       S+    
Sbjct: 94  EVETAALAGALAARAGYAEARLVEGNDPRG---------IDVAVLSRLPLRAYVSHRDER 144

Query: 133 AKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              S      R  VE       G  + ++  HL S    D          +  ++QA  L
Sbjct: 145 DA-SGRPLFPRDCVEAHAALPGGGTLALVGSHLSSALSDDG---------TRRAEQAARL 194

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           ++       +    V  GD N +             +     +                 
Sbjct: 195 REVADGLLRAGAQVVAGGDLNDEAGST----ALAPLLGDGGWIDPAAALPPEARWTWSGG 250

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +  +D+  + +     ++Q +               +  SDH P+ +D 
Sbjct: 251 GARAALDHLAVPRADAGSVVQAAI--------AGGPDVQAASDHRPVVLDL 293


>gi|21958993|gb|AAM85715.1|AE013819_1 exonuclease III [Yersinia pestis KIM 10]
 gi|45436631|gb|AAS62185.1| exodeoxyribonuclease III [Yersinia pestis biovar Microtus str.
           91001]
          Length = 271

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 79/311 (25%), Gaps = 73/311 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ VS+NIN L                 +    L    +    D++ LQE         
Sbjct: 3   TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +FP               +         H  +A+  K   +  +       +D+      
Sbjct: 44  MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKEQPLAVRRGFPSDEEDA-----Q 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +   +      + V++       F       +       ++    L+ ++ ++    
Sbjct: 92  RRIIMADLATPQGTLTVIN-----GYFPQGESRDHPIKFPAKARFYADLQRYLEEQLSPE 146

Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
              +I GD N                          L    ++ + +     +  F    
Sbjct: 147 AQVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWLERLQNWGLVDTFRAAN 206

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  Q      I           D      ++ 
Sbjct: 207 PDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYAIRGMEKP 259

Query: 293 SDHCPISIDYD 303
           SDH P+  ++ 
Sbjct: 260 SDHAPVWSEFS 270


>gi|254805570|ref|YP_003083791.1| exodeoxyribonuclease III [Neisseria meningitidis alpha14]
 gi|254669112|emb|CBA07713.1| exodeoxyribonuclease III [Neisseria meningitidis alpha14]
          Length = 256

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMARHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +                    
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWFQNLLDLGLTDSLRHIHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|110641869|ref|YP_669599.1| exonuclease III [Escherichia coli 536]
 gi|300987545|ref|ZP_07178252.1| exodeoxyribonuclease III [Escherichia coli MS 200-1]
 gi|110343461|gb|ABG69698.1| exodeoxyribonuclease III [Escherichia coli 536]
 gi|300306115|gb|EFJ60635.1| exodeoxyribonuclease III [Escherichia coli MS 200-1]
 gi|324011528|gb|EGB80747.1| exodeoxyribonuclease III [Escherichia coli MS 60-1]
          Length = 272

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 83/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE   ++ +
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQETKVHDVM 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             + ++        H  +A+  K   +  +              
Sbjct: 46  ----------FPLEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  F  
Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|172062743|ref|YP_001810394.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
 gi|171995260|gb|ACB66178.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
          Length = 600

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 85/320 (26%), Gaps = 48/320 (15%)

Query: 19  SVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVF 70
             A  VR+ S+N+ N  +       + +   R              +    + L AD++ 
Sbjct: 286 PQAD-VRVASFNVFNYFNGDGAGGGFGDPSGRGAKTPAAFARQEAKIVAALRALRADVIG 344

Query: 71  LQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           L E+ +     A    +    +      +   + R   + I  A+    + +       P
Sbjct: 345 LMEIANNGQGPASAVQRLAARLGGGWRAVDPGTPRLGRDAIAVALLYDSRTIE------P 398

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSC------ 181
           +  A        NR  +       G      V   HLKS     +       S       
Sbjct: 399 VGRAATVALDGRNRPPLAQTFRRVGGTRAFTVAVNHLKSKNCPHAAGPDLDQSDGQGCWN 458

Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +  ++ A+ +  W+       +    ++ GD N             + ++         +
Sbjct: 459 ATRTRAAERVAAWLATSPTGAAADGVLLIGDLNSYAKEDP-----LRALESRGYANLVAR 513

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED---------------- 283
              +             +D+ +        +       I  +E                 
Sbjct: 514 FAGNAGYTYVFRGEAGNLDHALATPPLAARVKAVHAWHINADEPIALQAVPDYKTPAQQA 573

Query: 284 -DIKSRGKRLSDHCPISIDY 302
                   R SDH P+ ID 
Sbjct: 574 AYYAPDAYRSSDHDPVVIDL 593


>gi|70731287|ref|YP_261028.1| exonuclease III [Pseudomonas fluorescens Pf-5]
 gi|68345586|gb|AAY93192.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf-5]
          Length = 270

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 80/311 (25%), Gaps = 74/311 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE    +     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVADE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+  +   +        G +     A  R
Sbjct: 41  ------QFPLADIQALGYHVHYHGQKGHYGVALLSRQAPLALHK----GFEGDDEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + NG  + +++       F       +        +  Q L+  +  +  +  
Sbjct: 91  FIWGTFADANGTPVTIMN-----GYFPQGESRDHPTKFPAKERFYQDLQHLLESRFSNDQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P V+ GD N                        ++L    ++   +     +  F     
Sbjct: 146 PLVVMGDVNISPEDCDIGIGAENAKRWLKTGKCSFLPEEREWMARLKNWGLVDSFRHLNP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +  Q     +            D      ++
Sbjct: 206 EVNDRFSWFDYRSRGFEDEPKRGLRIDLIMASQGLLPRVKDAGV-------DYELRGMEK 258

Query: 292 LSDHCPISIDY 302
            SDH PI ++ 
Sbjct: 259 PSDHAPIWLEL 269


>gi|291615489|ref|YP_003522597.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4]
 gi|291582551|gb|ADE17007.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4]
          Length = 396

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 78/285 (27%), Gaps = 34/285 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            AQ + + SWN   L               T  D++           D V LQE+ S  A
Sbjct: 17  SAQALTIASWNTKHLG------------WGTKRDWSATAAVVAPY--DFVALQEVMSGAA 62

Query: 80  VAKVFPKNTWCIF--YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           V ++           +S+        R        A   R++ V  +  +   L   D F
Sbjct: 63  VKRLVQALEQQTGADWSSLVSETSVGRSKRYQEFYAFIWREEVVDYVGGAVVYLDPGDLF 122

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           +    R       + +  +       +        +           ++Q     +W+ +
Sbjct: 123 A----REPFAARFQTDNGQYRWTAATVH------VIYGDSRDERRREARQLDDYVNWLEE 172

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           +     P ++ GDFN      G  D   + + P                AN         
Sbjct: 173 EVAEGDPVILTGDFNLPPESAGFRD-LARVLKPAIREGASTLSAKEGRYANLY------- 224

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D      +A K                     K +SDH P+ I  
Sbjct: 225 DNIWYRPDALKIQETRIDRFPQRLGISHNLARKTVSDHAPVVIAL 269


>gi|117623921|ref|YP_852834.1| exonuclease III [Escherichia coli APEC O1]
 gi|237705700|ref|ZP_04536181.1| exonuclease III [Escherichia sp. 3_2_53FAA]
 gi|301026483|ref|ZP_07189913.1| exodeoxyribonuclease III [Escherichia coli MS 69-1]
 gi|91072540|gb|ABE07421.1| exodeoxyribonuclease III [Escherichia coli UTI89]
 gi|115513045|gb|ABJ01120.1| exodeoxyribonuclease III [Escherichia coli APEC O1]
 gi|226900457|gb|EEH86716.1| exonuclease III [Escherichia sp. 3_2_53FAA]
 gi|300395501|gb|EFJ79039.1| exodeoxyribonuclease III [Escherichia coli MS 69-1]
 gi|315286456|gb|EFU45891.1| exodeoxyribonuclease III [Escherichia coli MS 110-3]
 gi|315299863|gb|EFU59103.1| exodeoxyribonuclease III [Escherichia coli MS 16-3]
          Length = 272

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  F  
Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|37680518|ref|NP_935127.1| exonuclease III [Vibrio vulnificus YJ016]
 gi|37199266|dbj|BAC95098.1| exodeoxyribonuclease III [Vibrio vulnificus YJ016]
          Length = 268

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 87/310 (28%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPIEDVEAMGYKVYFHGQKAHYGVALLCKQEPIEIQK----GFPTDNDEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++  G+K+ VL+       F       +        Q  Q L  ++T  +++  
Sbjct: 91  MIIGTFLDEKGEKVTVLN-----GYFPQGDNIAHETKFPYKRQFYQDLMGYLTTHRDNGE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++     ++ +T+        F K   
Sbjct: 146 QVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSFQPEEREWLQTLLDWGLEDTFRKLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           S  +       +           ID  +   +      +        + D      ++ S
Sbjct: 206 SVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLATKCRES-------DIDYELRGIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   ++
Sbjct: 259 DHAPIWATFE 268


>gi|146292722|ref|YP_001183146.1| endonuclease/exonuclease/phosphatase [Shewanella putrefaciens
           CN-32]
 gi|145564412|gb|ABP75347.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens
           CN-32]
          Length = 944

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 50/333 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67
           V  T      +++ S+N+      +G      + +              +      + AD
Sbjct: 450 VAPTLVDGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509

Query: 68  IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120
           +  L E+ +      +A+A +       +  +    I  +       + I   +  R+  
Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGINAIGTDAITVGLIYRRDK 569

Query: 121 V-------RVLQQSYPLLGAKDS-FSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167
           V        +   + PL   +   F+   NR  +     +NG +  + V   HLKS    
Sbjct: 570 VTPKGAARILSSANSPLDDNQQPLFNDTRNRPMLTQAFNVNGSEEGVVVAVNHLKSKGSE 629

Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           C  D   N    +C+   ++ A  +  W+ ++       ++ GD N              
Sbjct: 630 CAGDPDLNDGQGNCNSTRTRAATAVGQWLGEQYPE-QGVLLIGDLNAYAKEDP-----LT 683

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +        F + +               +D+ + +      ++  +   I  +E  + 
Sbjct: 684 ALANAGFSELFAELRKPNPYTYVFSAESGQLDHALANAELLDKVVDVTQWHINTDEPRVL 743

Query: 287 SRG-----------------KRLSDHCPISIDY 302
                                R SDH P+ I  
Sbjct: 744 DYNEEFKTPAQIQDLYSTDAYRSSDHDPVVISL 776


>gi|260777949|ref|ZP_05886842.1| hypothetical protein VIC_003346 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605962|gb|EEX32247.1| hypothetical protein VIC_003346 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 315

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 103/310 (33%), Gaps = 28/310 (9%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +++   + N+    E  G      +        +     +    NL+ADI+ +QE+ S +
Sbjct: 5   KRLTFATANLFNFIEPPGAFYDFENIYDADAWEAKCQWTKNAILNLNADIIGVQEVFSLD 64

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG--AKDS 136
           A  ++F +  +  ++++    N       +    A+A +     V   + P         
Sbjct: 65  AARQLFEELGY-SYFASVDSPNIESDYIYSHPVVALASKYPISHVEAVTLPASSLAGYSI 123

Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFC-------FLDSLENTYSPSCSLLSQQA 188
                +R+ V  +VE+    ++ V   HLKS                    S      +A
Sbjct: 124 PQPEFSRQPVFAVVEVPDIGEVAVYVSHLKSQRATEAIEEGEGQPLVGQWLSSQQRGWEA 183

Query: 189 QWLKDWIT-QKKESLVPFVIAGDFNRKINYL-------GNNDDFWKTIDPNDSLIRFPKE 240
             L+  +  Q  +  +P V+ GD N+ I+             + +  +  +  +    + 
Sbjct: 184 VMLRLAMEQQYAKHPIPTVLVGDMNQPISSDITGLLTKVIEGESFLMLRDSWDIFVIKQP 243

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------IKSRGKRLSD 294
              R   + +      +DY +  Q               Y+  D         R K+ SD
Sbjct: 244 GAERPPTHYHFAKGNVLDYILFSQEFQPDSQYSMADVTSYSTLDNHLINPSFERDKQASD 303

Query: 295 HCPISIDYDF 304
           H  +S+   F
Sbjct: 304 HAFVSVTVRF 313


>gi|153000336|ref|YP_001366017.1| PKD domain-containing protein [Shewanella baltica OS185]
 gi|151364954|gb|ABS07954.1| PKD domain containing protein [Shewanella baltica OS185]
          Length = 944

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 98/333 (29%), Gaps = 50/333 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67
           +  T      +++ S+N+      +G      + +              +      + AD
Sbjct: 450 IAPTLVEGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509

Query: 68  IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120
           +  L E+ +      +A+A +       +       I  +       + I   +  R   
Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEVRYAYIAPTGMNAIGTDAITVGLIYRSDK 569

Query: 121 V-------RVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167
           V        +   + PL    K  F  + NR  +     +NG +  + V   HLKS    
Sbjct: 570 VTPQGAARILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLKSKGSE 629

Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           C  D   N    +C+   ++ A     WI+++       ++ GD N              
Sbjct: 630 CAGDPDLNDGQGNCNITRTRAATAAGQWISEQYP-DQGILLIGDLNAYAKEDP-----LT 683

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +        F K +     +         +D+ + +      ++  +   I  +E  + 
Sbjct: 684 ALGNAGFSELFAKLEKPNPYSYVFSAESGQLDHALANTALLDKVVDVTEWHINTDEPRVL 743

Query: 287 SRG-----------------KRLSDHCPISIDY 302
                                R SDH P+ I  
Sbjct: 744 DYNEEFKTPTQIQDLFATDAYRSSDHDPVVISL 776


>gi|56477773|ref|YP_159362.1| endonuclease / exonuclease / phosphatase family protein
           [Aromatoleum aromaticum EbN1]
 gi|56313816|emb|CAI08461.1| predicted endonuclease / exonuclease / phosphatase family protein
           [Aromatoleum aromaticum EbN1]
          Length = 250

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 85/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----YNA 79
           +R+ ++NI+    Q    +              LR+  + LD D+VFLQE+      +  
Sbjct: 4   LRVCTYNIHKGFSQFNRRMV----------VHELRERLRTLDVDVVFLQEVQGLHLGHAN 53

Query: 80  VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +   +P +    F +        +      +  H   AV  +   V       +    S 
Sbjct: 54  LHPNWPGSPQHEFLAEDVWSQFAYGGNAVYDHGHHGNAVLSRYPIVSS-----MNQDVSD 108

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  +   VE+ G    V  +         S             +Q   L + + Q
Sbjct: 109 HRFERRGILHCEVEVPGIGEPVHCVCAHLGLMAGS-----------RRRQMGALAERMEQ 157

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P +IAGDFN        N               F + +     +  +    + +
Sbjct: 158 VAPGGAPLIIAGDFND-----WRNRAAQLLGRRLGLREAFDRGRGEPARSFPSTVPVLCL 212

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           D   +            F               R+SDH  ++ + +F
Sbjct: 213 DRIYVRG----------FRVRQAQVHCGLP-WSRISDHAALTAELEF 248


>gi|328543967|ref|YP_004304076.1| exodeoxyribonuclease III [polymorphum gilvum SL003B-26A1]
 gi|326413711|gb|ADZ70774.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1]
          Length = 260

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 85/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    +  + +    D+  LQE+ S   V + 
Sbjct: 1   MKIATWNING----------------VKARIDTVLAWLQEARPDVACLQEIKS---VDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +         + ++           +A+  K      +        D  +R    
Sbjct: 42  FPCQPF-------EDLGYNVATHGQKGFNGVALLSKRPLEDVRRGLPGDDGDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V  +   + V  ++L +   L + +  Y  +          L+     +     
Sbjct: 92  --IEACVSTDRGAVRVGCLYLPNGNPLGTDKFPYKLA------WMDRLRRHAALRLAEEQ 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
           PF++ GD+N      +     D     +             N       +      +   
Sbjct: 144 PFLLLGDYNVIPEPKDARNPQDWLGDALFQPESRQHFRALVNLGFTEAVRACTDAADTYT 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L            D      ++ SDH P+ +
Sbjct: 204 FWDYQAGAWQKNNGIRIDHVLLSPQAGDLLASCGI-------DKHVRAWEKPSDHVPVWV 256

Query: 301 DY 302
           + 
Sbjct: 257 EL 258


>gi|330953392|gb|EGH53652.1| exonuclease III [Pseudomonas syringae Cit 7]
          Length = 270

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 81/314 (25%), Gaps = 78/314 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++VS+NIN L                 +    L         D++ LQE  +       
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + + +                 H  +A+  +N  +        G +     + 
Sbjct: 45  AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHK----GFEGDDEESQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R       + NG+ + +++       F       +        +  + L+  +     +
Sbjct: 89  KRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGHFSN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
             P ++ GD N                        ++L    ++ + +     +  F   
Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHL 203

Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                +       +             ID  +        + +          D      
Sbjct: 204 YPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKEAGV-------DYDLRGM 256

Query: 290 KRLSDHCPISIDYD 303
           ++ SDH PI ++  
Sbjct: 257 EKPSDHAPIWLELS 270


>gi|330810622|ref|YP_004355084.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378730|gb|AEA70080.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 270

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 80/313 (25%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVHDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+  +     Q    L    +       R
Sbjct: 41  ------QFPLAEVQALGYHVHYHGQKGHYGVALLSR-----QAPLSLYKGFEGDDEDAQR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     + NG  + +++       F       +        +    L+  +  +  + 
Sbjct: 90  RFIWGTFADANGVPVTIMN-----GYFPQGESRDHPTKFPAKERFYSDLQQLLESRFSND 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            P V+ GD N                        ++L    ++   +     +  F    
Sbjct: 145 QPVVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSFLPEEREWMARLKNWGLVDSFRHLN 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +        +            D      +
Sbjct: 205 PDVTDRFSWFDYRSRGFEDEPKRGLRIDLILTSHGLLPRVKDAGV-------DYELRGME 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI +   
Sbjct: 258 KPSDHAPIWLQLS 270


>gi|284030291|ref|YP_003380222.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283809584|gb|ADB31423.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 254

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 74/291 (25%), Gaps = 44/291 (15%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A  VR+++WN+                 +       +    + +  D+V +QE      
Sbjct: 2   SATTVRVMTWNLWWRFG-----------PQWVDRQEAILATLRAVGPDVVAVQEAWPEQV 50

Query: 80  --VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             +A+    +      S     + ++ D    +   +  R        ++ P      + 
Sbjct: 51  ETLAEQLGMHCRYAGPSYPPETDIARGDDPVSLGMGLLSRWPIADWKVRTMP------AR 104

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-T 196
            R     AV   ++     + V+   L+                     Q + L +    
Sbjct: 105 HRQLEPVAVVASLDHPQVTLHVVTSCLEYEPAFTDD----------RIAQTRLLAELATD 154

Query: 197 QKKESLVPFVIAGDFNRKINYL---GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              +   P ++AGD N            D        +   I  P E             
Sbjct: 155 PAYDGDAPVIVAGDLNAGPTSRVLGPLYDVLRDAWTGDPDAITSPDEAGPDLR------- 207

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+       +     +               G   SDH  +  D  +
Sbjct: 208 DQRIDHIFYRPGTF----SQEVEVTQAQLAGDPVDGITPSDHQAVVCDLRW 254


>gi|186475729|ref|YP_001857199.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815]
 gi|184192188|gb|ACC70153.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815]
          Length = 287

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 87/307 (28%), Gaps = 49/307 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +RL+SWN+         +    S+ RT  +   L  +      D++ +QE+         
Sbjct: 1   MRLISWNVQW----GRSAHGDVSLSRTIDEARRLADF------DVLCMQEVTRGFSVLAG 50

Query: 75  ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                 +  +A + P  T       +         +        A+  +        + L
Sbjct: 51  HPGDDQFAELADLLPGYTVLGAIGADLAPLKLDAPAAPRRQFGNALVTRLPVERVIRHSL 110

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLS 185
               D  + +  R A+E +++  G  + V+  HL+ +                   +  +
Sbjct: 111 PWPADPDAPSMQRVALEAVLQAPGGAVRVIVTHLEFYSLKQRLAQVERLREMQQEAAAHA 170

Query: 186 QQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                 ++ I    ++  P   ++ GDFN                     L  +      
Sbjct: 171 ANPAPAENAIGPFADTARPVSAIVCGDFNSAYGSDAYRRMLEPLAGSPSFLDAWTVLHPG 230

Query: 244 RCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +                  +  D+  + ++    L                  G R SDH
Sbjct: 231 QTPPMTAGIYDKAQWSDGPLTCDFVFVTEDLQARLQSCEI-----------DGGTRASDH 279

Query: 296 CPISIDY 302
            P+ ++ 
Sbjct: 280 QPVIVEI 286


>gi|254500814|ref|ZP_05112965.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11]
 gi|222436885|gb|EEE43564.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11]
          Length = 260

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 83/302 (27%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    ++++ K    D+   QE+ S +     
Sbjct: 1   MKIATWNING----------------VKARLETVQEWLKEASPDVACFQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K      +        D  +R    
Sbjct: 41  ------NFPRQPFEDLGYNVETHGQKGFNGVAILSKTPLEDVERRLPGNDDDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V      +    ++L +   L + +  Y             L     ++    V
Sbjct: 92  --IEATVTHGDGVVRFGCLYLPNGNPLGTEKFPYK------LGWMDRLLVHAEKRLAEEV 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF++ GD+N   +               +   +   ++ +             ++     
Sbjct: 144 PFILLGDYNVIPDPVDAKNPENWTDDALFQPESRQKFRALTHLGMTEAIRACTEAPETFT 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ +M   A   ++           D      ++ SDH P+ +
Sbjct: 204 FWDYQAGAWQKNNGIRIDHILMSPQANDKMLGCGI-------DKHVRGWEKPSDHVPVWV 256

Query: 301 DY 302
             
Sbjct: 257 TL 258


>gi|68248592|ref|YP_247704.1| exonuclease III [Haemophilus influenzae 86-028NP]
 gi|68056791|gb|AAX87044.1| exodeoxyribonuclease III [Haemophilus influenzae 86-028NP]
          Length = 267

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEAFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K    + +       +D+  R  
Sbjct: 45  EITENLGYHVFHH------------GQKGHYGVALLTKQEPKVIRRGFPTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V++       F       +        +    L+ ++ ++ + 
Sbjct: 91  ---IIMADLETEFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDR 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L     +++ +        F K 
Sbjct: 143 SNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++ Q   +  +                  ++
Sbjct: 203 NPTANDKFSWFDYRSKGFDDNRGLRIDHILISQKLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|256838624|ref|ZP_05544134.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739543|gb|EEU52867.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 280

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 92/316 (29%), Gaps = 49/316 (15%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +R  ++  +     C     Q+   + + S+N+   +E +    W +             
Sbjct: 1   MRNLIIVFISLFTFCIGISGQQKCKLNVGSFNLRYDNEGDKDDSWVHRKDMA-------V 53

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                 D D+  +QE   +  V  +   +T+            +        H A+  +K
Sbjct: 54  SLVHFHDFDVFGIQEGLIHQ-VKDLVKDDTYTFVGVGRDDGKEAGE------HAAVLFKK 106

Query: 119 KNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171
              ++L      L          +     R      ++  ++GK+ +   +H     F  
Sbjct: 107 DRFKLLDSGNYWLSETQDKPSFGWDAQCRRVCSWAKLKDKVSGKEFYFFSVH-----FDH 161

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TID 229
             +     S  ++    + +            P +  GDFN   +             +D
Sbjct: 162 IGKVARHESALIMLANIKKIA--------GDSPAICVGDFNGTPDSEPIQILKSDGLLLD 213

Query: 230 PNDSLIRFPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
             +     P       N    N   K  IDY  + +N              Y   +    
Sbjct: 214 SREISKTPPYGTVGTTNQFNLNAPMKNRIDYIFVTKN---------IHVNKYGTLNEFQY 264

Query: 289 GKRLSDHCPISIDYDF 304
           G   SDH PI I+ +F
Sbjct: 265 GHYPSDHFPIMIEAEF 280


>gi|254418698|ref|ZP_05032422.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
 gi|196184875|gb|EDX79851.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
          Length = 298

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 78/292 (26%), Gaps = 33/292 (11%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   A   + VRL+S+NI   +  +                  + +     D D++ +QE
Sbjct: 30  LTAPADAPRSVRLMSYNIRYDAPDD--------TPNWLQRRPHMARQIAFFDPDVLGVQE 81

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                          +  +         +   +      A         +     P   +
Sbjct: 82  ALIPMVAYLADQAPAYDHYGVGRDDGAQAGETTTLFWRRARFEAVSTQTLWCSPTPDRPS 141

Query: 134 KDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           K  +  A  R    +++    +G+ + V + H+               + +     A   
Sbjct: 142 K-GWDAALPRTVTRVVLRDRASGRLLDVRNAHMDHVG-----------AVAREQCAALAA 189

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--K 249
                  + +    V+ GDFN   +           +    ++           N     
Sbjct: 190 DLAPATVEGATAAVVLMGDFNAGPDTAPYRRVLAAGLRDARAVSPVVFGPAGTYNDFDIA 249

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              + + ID+  +                 Y        G+ +SDH P+ +D
Sbjct: 250 RDNDGVAIDHVFVAPGLS---------VERYGVPTDSFSGQVISDHFPVVVD 292


>gi|300022777|ref|YP_003755388.1| exodeoxyribonuclease III [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524598|gb|ADJ23067.1| exodeoxyribonuclease III [Hyphomicrobium denitrificans ATCC 51888]
          Length = 260

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 89/301 (29%), Gaps = 69/301 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L +WNIN                   +       Y +    D++  QE+ S +       
Sbjct: 3   LATWNING----------------VKARLESALTYLRQQSPDVICFQEIKSVDD------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   S  + I ++   +       +A+  K+              D  +R      
Sbjct: 41  ----GFPTSAFQDIGYNVATNGQKGFNGVAILSKSPLEDVVRGLPGDDADQHARW----- 91

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +E  V +  + + V+ ++L +   + + + +Y  +          ++    Q ++  +P 
Sbjct: 92  IEASVPLGDRMVRVVSLYLPNGNPIGTEKFSYKLA------WMARMRLRAKQLQQDEMPL 145

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+AGDFN                       +   W+T+  N+      +           
Sbjct: 146 VLAGDFNVIPESVDAKRPAAWVNDALFQPESRAAWRTLV-NEGFTDATRACHPGPGVYTF 204

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           ID+ ++   A   L+           D      ++ SDH P+ + 
Sbjct: 205 WDYQAGAFQKDDGIRIDHILLSSQAADLLVASGI-------DRATRAQEKPSDHVPVWVK 257

Query: 302 Y 302
            
Sbjct: 258 L 258


>gi|126665590|ref|ZP_01736572.1| Endonuclease/exonuclease/phosphatase [Marinobacter sp. ELB17]
 gi|126630218|gb|EBA00834.1| Endonuclease/exonuclease/phosphatase [Marinobacter sp. ELB17]
          Length = 536

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 88/306 (28%), Gaps = 27/306 (8%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNS------VKRTTSDYTLLRQYAKNLDADIVFLQ 72
             +  +R+++ N+N L   +G      +        +       L        AD++ L 
Sbjct: 234 PTSANLRVMTLNLNNLFNGDGRGQGFPTSRGAKTQAQYKRQLQRLSAGLNQAGADLLALS 293

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLL 131
           E+ +    +               R +         + I   +  R   V  L      L
Sbjct: 294 ELENDGYGSNSAIAQLAASLGPHWRFVVPVDSAMQKDAIRNGLLYRADRVNAL-GPAQYL 352

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLS 185
                      R A+    +  G  + ++ +HLKS    ++       +        +  
Sbjct: 353 SGGGGRPSLTQRFAL----KSGGPSLRLVSVHLKSKSCRNARGENAQQNDGQGCYTVVRV 408

Query: 186 QQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +QA+ L   + Q  +S      +I GDFN        ++          +          
Sbjct: 409 KQAKTLHQQLGQLDKSNALAGTLITGDFNSYSKEQPISELARAGYTNMVAHFHPCTPVLC 468

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------KRLSDHC 296
              + +    +  +D+ +        ++      I  ++  I            R SDH 
Sbjct: 469 EHYSYRFKGARGSLDHALASAALKPRVLSAKVWNINADQPRIADYRSHSSPQPWRSSDHN 528

Query: 297 PISIDY 302
           P+  D 
Sbjct: 529 PLITDI 534


>gi|300938914|ref|ZP_07153616.1| exodeoxyribonuclease III [Escherichia coli MS 21-1]
 gi|300456174|gb|EFK19667.1| exodeoxyribonuclease III [Escherichia coli MS 21-1]
          Length = 272

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  F  
Sbjct: 146 RENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKVFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|83745850|ref|ZP_00942907.1| Exodeoxyribonuclease III [Ralstonia solanacearum UW551]
 gi|83727540|gb|EAP74661.1| Exodeoxyribonuclease III [Ralstonia solanacearum UW551]
          Length = 318

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 97/304 (31%), Gaps = 61/304 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ +WN+N+L  +  +      +    +D T +         D++ LQE+   +    
Sbjct: 49  PMRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELKLPDDRYP 97

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +   +             ++   +    +  +A+  +    + +   ++     F+    
Sbjct: 98  LAELDA----------AGYASLFTGQKTYNGVAILARKA-AMPEGRDVIKNIPGFADEQQ 146

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  V    ++ G  + V+  +  +   LDS +  Y        +    L+DW+  + ++ 
Sbjct: 147 R-IVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLKTEMDAH 199

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GDFN   +                       ++ ++    +  F   + +    
Sbjct: 200 PRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFEQAD-KL 258

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +         + ID+ ++     +              D +    ++ SDH P+
Sbjct: 259 FSWWDYRLFAFKRNAGLRIDHILLSPELAQRCESCHI-------DRVPRGWEQPSDHTPV 311

Query: 299 SIDY 302
               
Sbjct: 312 VAAL 315


>gi|187940074|gb|ACD39207.1| hypothetical protein PACL_0419 [Pseudomonas aeruginosa]
          Length = 368

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 90/300 (30%), Gaps = 42/300 (14%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            L+  ++  + S A  + L+SWN   L             +     +  L + A    AD
Sbjct: 9   LLLGTVLVSSLSSAADLTLMSWNAMRLG------------QGGEKSFPALAEVAGK--AD 54

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V +QE+ +   + K+  +           L++H+    +     A  +R+  V     +
Sbjct: 55  LVAIQEVMNEEGLTKLEAELEKRTGEQWSTLVSHAVGSRSYKELYAFLMRESVVVYEDGA 114

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
              +   D       R  +    +   +G    V  IH+                     
Sbjct: 115 VVYMDRGD----RFIREPLSARFKSKRDGTLFAVASIHVLYGKGPQD-----------RE 159

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            + + L+ +    +      P ++ GDFN   ++       +  +  + + +        
Sbjct: 160 PEVRELESYWAWLESIYPETPVMLVGDFNMPPSHP-----AFSGLSQHATPLITKGATTL 214

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDY 302
                         D   + +     L      +          + ++ +SDH P+ +  
Sbjct: 215 SAREGLYAN---LYDNIWVSRTHRLKLDNAGIMDYPRMIGWSHEKSRKHVSDHAPVFVTL 271


>gi|288549534|ref|ZP_05967343.2| exodeoxyribonuclease III [Enterobacter cancerogenus ATCC 35316]
 gi|288318297|gb|EFC57235.1| exodeoxyribonuclease III [Enterobacter cancerogenus ATCC 35316]
          Length = 354

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 84/314 (26%), Gaps = 73/314 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           ++A  ++ VS+NIN L                 +    L    +    D++ LQE     
Sbjct: 82  ALAATMKFVSFNINGL----------------RARPHQLEAIVEQHQPDVIGLQE---TK 122

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +FP             + ++        H  +A+  K   V  +            
Sbjct: 123 VHDDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPVSVRR-----GFPGDD 170

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               RR +   +      I V++       F       +       ++  Q L+D++T +
Sbjct: 171 GEAQRRIIMAEIPSPLGNITVIN-----GYFPQGESRDHPTKFPAKAKFYQDLQDYLTAE 225

Query: 199 KESLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRF 237
                P +I GD N                          L    ++ + +     +  F
Sbjct: 226 LNKENPVLIMGDVNISPTDLDIGIGEESRKRWLRTGKCSFLPEEREWMERLIGWGLVDTF 285

Query: 238 PKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                   +       +           ID  +      +  I+          D     
Sbjct: 286 RAANPDTQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAERCIETGI-------DYDIRG 338

Query: 289 GKRLSDHCPISIDY 302
            ++ SDH P+   +
Sbjct: 339 MEKPSDHAPVWAKF 352


>gi|300994386|ref|ZP_07180891.1| exodeoxyribonuclease III [Escherichia coli MS 45-1]
 gi|300406232|gb|EFJ89770.1| exodeoxyribonuclease III [Escherichia coli MS 45-1]
 gi|315290452|gb|EFU49827.1| exodeoxyribonuclease III [Escherichia coli MS 153-1]
          Length = 272

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +    S  +Q  Q L +++  + +
Sbjct: 91  AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFSAKAQFYQNLHNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  F  
Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|78063607|ref|YP_373515.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
 gi|77971492|gb|ABB12871.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
          Length = 604

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 95/316 (30%), Gaps = 48/316 (15%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   ++         +    K +DAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKNFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         +       +  R+++    R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELSAVRQLAAKLGNNWRVVDPGVSRLGGDAITVAMIYDSRKVE------PVGRAA 406

Query: 135 DSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185
                  NR+ +     +   N + + V   HLKS    D+  +               +
Sbjct: 407 TLAIDDKNRQPLAQSFRLIAGNKQSLTVAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A  + DW+       +    ++ GDFN             +T++         +   +
Sbjct: 467 RAAAKVADWLAGNPTGVAGQGVLLIGDFNSYTYEDPI-----RTLETRGYRNLVARWIGA 521

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------- 288
              +         +D+ +        +       I  +E                     
Sbjct: 522 NAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYA 581

Query: 289 --GKRLSDHCPISIDY 302
               R SDH P+ ID 
Sbjct: 582 PDAYRSSDHDPVLIDI 597


>gi|294827778|ref|NP_711210.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai
           str. 56601]
 gi|293385623|gb|AAN48228.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 607

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 95/293 (32%), Gaps = 25/293 (8%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++S N+  L     +  W N      +       Y K  + D++  +E    +A   
Sbjct: 138 EIKVLSHNVFMLPTN--LPRWGNLGHDERAKRISKSDYVK--NQDVIVFEEAFDTSARKI 193

Query: 83  VFPKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T            +     S + ++  + +  K     +  Y    + 
Sbjct: 194 LLDNLREEYPYQTDVVGRTKKNWDASLGNFRSYSLVNGGVVILSKWPIEEKIQYIFNDSG 253

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  N+  V + +   GKK  V+  H +S       +N  +      + Q   ++++
Sbjct: 254 CGADWFANKGFVYVKINKEGKKFHVIGTHAQS-----QDQNCSNLGIPNRANQFDDIRNF 308

Query: 195 I-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANK 249
           I ++        +I GD N         D   +        +  P   D++ N       
Sbjct: 309 IYSKNIPKDETVLIVGDLNVIKESNEYYDMISRLNVNEPRYVGVPFTWDAKTNEIAAYYY 368

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPIS 299
                + +DY  + ++  +  + ++ +    ++      G      SDH PI 
Sbjct: 369 ENEEPVYLDYIFVSKSHAQPPVWQNLAYDPVSKQTWTVSGYTSDEFSDHYPIY 421


>gi|217973633|ref|YP_002358384.1| PKD domain-containing protein [Shewanella baltica OS223]
 gi|217498768|gb|ACK46961.1| PKD domain containing protein [Shewanella baltica OS223]
          Length = 944

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 101/333 (30%), Gaps = 50/333 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67
           V  T +    +++ S+N+      +G      + +              +      + AD
Sbjct: 450 VAPTLNDGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFDRQKAKIVSAMVGISAD 509

Query: 68  IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120
           +  L E+ +      +A+A +       +  +    I  +       + I   +  R+  
Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGMNAIGTDAITVGLIYRRDK 569

Query: 121 V-------RVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167
           V        +   + PL    K  F  + NR  +     +NG +  + V   HLKS    
Sbjct: 570 VTPQGAARILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLKSKGSE 629

Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           C  D   N    +C+   ++ A     WI+++       ++ GD N              
Sbjct: 630 CAGDPDLNDGQGNCNITRTRAATAAGQWISEQYP-DQGVLLIGDLNAYAKEDP-----LT 683

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +        F K +     +         +D+ + +      ++  +   I  +E  + 
Sbjct: 684 ALGNAGFSELFAKLEKPNPYSYVFSAESGQLDHALANAALLDKVVDVTEWHINTDEPRVL 743

Query: 287 SRG-----------------KRLSDHCPISIDY 302
                                R SDH P+ I  
Sbjct: 744 DYNEEFKTPAQIQDLFATDAYRSSDHDPVVISL 776


>gi|294651509|ref|ZP_06728821.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292822597|gb|EFF81488.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 459

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 97/295 (32%), Gaps = 38/295 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEMGSYNA 79
           A +++++S+NI  L                      L +  ++L+  D++ +QE  S + 
Sbjct: 190 ADEIKVLSYNIYALPMVASKIS------------ERLAELPQHLNGYDVILMQEAFSSSR 237

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +        + +   + +     +  D    +  R   V+  +  YP     D F+ 
Sbjct: 238 TGMLNQLAQQYPYQTHVPIGS---GYNLFDSGVLVLSRYPIVKTAEMIYPDCTGTDCFAD 294

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198
                 +   +  NGK   V   H  SF          + + +L   Q Q ++  I Q+ 
Sbjct: 295 K---GVIYAEIIKNGKAYHVTSTHTASF--------DTNEARALRQVQFQQIRQLINQQN 343

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------- 251
             S    ++ GDFN     L   D      + N +         S  +   N        
Sbjct: 344 IPSFDAVLMGGDFNVN-KLLWPQDYQDMLTNLNATAPVSTGYTASTFDPRINKLAGAAGS 402

Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  +DY V   N  +     +   IL +  D       LSDH P+   +++
Sbjct: 403 GGTTVEYLDYVVSSNNHRQPTQSRNDVRILRSAADPLFMTWDLSDHFPVMGHFNY 457


>gi|220917964|ref|YP_002493268.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955818|gb|ACL66202.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 261

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 55/285 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+V+WN++ L                  D   + +   ++ AD+  LQE+G+       
Sbjct: 3   FRVVTWNVHGLRGAGRRP-----------DPERIARVLDDIGADVAGLQEVGAR------ 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            P        +  RL   +        H        A+  ++     ++Y L        
Sbjct: 46  LPGADAHAAEALARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGR--- 102

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  +   +++   ++ V   HL                     Q A  L   I + 
Sbjct: 103 --EPRGCLRADLDLGPMRVHVFAAHLGLHWR------------ERRRQAAALLSADILRD 148

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P V+ GDFN   +         +T+         P                + +D
Sbjct: 149 AALSHPLVLVGDFNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWP------LLRLD 202

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +D                  E       +R SDH P+ ++ +
Sbjct: 203 RAYVDAALRVL----------ACEVIRTPLARRASDHLPLVVELE 237


>gi|300823193|ref|ZP_07103326.1| exodeoxyribonuclease III [Escherichia coli MS 119-7]
 gi|331677629|ref|ZP_08378304.1| exodeoxyribonuclease III [Escherichia coli H591]
 gi|300524347|gb|EFK45416.1| exodeoxyribonuclease III [Escherichia coli MS 119-7]
 gi|331074089|gb|EGI45409.1| exodeoxyribonuclease III [Escherichia coli H591]
          Length = 272

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 82/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++   +     +  F  
Sbjct: 146 RDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|332374334|gb|AEE62308.1| unknown [Dendroctonus ponderosae]
          Length = 410

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 91/299 (30%), Gaps = 24/299 (8%)

Query: 18  ASVAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +    +RL  WNI    L  E +  +              L+ +       D++ LQE+
Sbjct: 104 TTSPHSLRLFQWNILSQALGKENDNFARCPEEALDWNHRKYLIVEEIIEYCPDVICLQEV 163

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             ++ +  V     +   +  +          +N     AI  R     +L+    +L  
Sbjct: 164 DHFHFLKHVLETQGYTGMFFPKPDSPCFYIDGNNGPDGCAIFFRTDKFELLRAETRILEI 223

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
               S       + L V+  G++I V+  HLK+           +   +L ++Q + L +
Sbjct: 224 WRIQSN-QVALLMILKVKQTGQEICVVTTHLKA--------RRSALLATLRNEQGKDLLE 274

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANK 249
           ++ Q      P +++GDFN +                  +            +       
Sbjct: 275 FVRQNCG-DRPTILSGDFNAEPAEPIYGTVLGSGQHLASAYAECAGNGWIPSDKREPPYT 333

Query: 250 NLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + +        IDY    +N                  D     +  SDH  +  D+
Sbjct: 334 TWKIRDEGEVCHTIDYIFYSKNKLDVDGVLELPTEKDIGPDRVPSLRYPSDHFSLICDF 392


>gi|159030909|emb|CAO88590.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1562

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/333 (12%), Positives = 85/333 (25%), Gaps = 51/333 (15%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFL 71
              +V  ++++ S+N+                  +          L      LDAD+  L
Sbjct: 474 TPTNVGGRLKIASYNVLNYFTTVANGTNNARGANSINEFQRQEEKLVTALIGLDADVFGL 533

Query: 72  QEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQQSY 128
            E+ +    A++K+       +  +       +     + I   +  R  K   V     
Sbjct: 534 IELENNGDGAISKLVNALN-AVAGAGTYAFIPTGTIGTDAIKVGLIYRPAKVTPVGDFKI 592

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------- 179
                   F    NR A+    +          +         S     S          
Sbjct: 593 LDSSVDPRFDDTRNRPALAQAFQEVNTAAKFNLVVNHLKSKGQSGLTNTSDPNFDRGDGQ 652

Query: 180 --SCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               +  +  A  L+DWI     +     ++I GD N             + ++      
Sbjct: 653 GFWNASRTNAALALRDWIATDPTNSGDRDYLIIGDLNAYAQEDPI-----RALESAGYTN 707

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
              +       +         +D+ + + +    +   +   I  +E ++          
Sbjct: 708 LVSQFGGIDAYSFVFDGQAGYLDHALANASLASQVTGVAEWHINADEPNVFDYNDDIIDP 767

Query: 290 -------------------KRLSDHCPISIDYD 303
                               R SDH P+ I  D
Sbjct: 768 GENPSNPPLNPSALYQVNPYRTSDHDPVLIGLD 800


>gi|320155825|ref|YP_004188204.1| exodeoxyribonuclease III [Vibrio vulnificus MO6-24/O]
 gi|319931137|gb|ADV86001.1| exodeoxyribonuclease III [Vibrio vulnificus MO6-24/O]
          Length = 268

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 87/310 (28%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPVEDVEAMGYKVYLHGQKAHYGVALLCKQEPIEIQK----GFPTDNDEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++  G+K+ VL+       F       +        Q  + L  ++T  +++  
Sbjct: 91  MIIGTFLDEKGEKVTVLN-----GYFPQGDNIAHETKFPYKRQFYKDLMGYLTTHRDNGE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++     ++ +T+        F K   
Sbjct: 146 QVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSFQPEEREWLQTLLDWGLEDTFRKLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           S  +       +           ID  +   +      +        + D      ++ S
Sbjct: 206 SVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAAKCRES-------DIDYELRGIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   ++
Sbjct: 259 DHAPIWATFE 268


>gi|238020687|ref|ZP_04601113.1| hypothetical protein GCWU000324_00577 [Kingella oralis ATCC 51147]
 gi|237867667|gb|EEP68673.1| hypothetical protein GCWU000324_00577 [Kingella oralis ATCC 51147]
          Length = 255

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      DI+ LQE+         
Sbjct: 1   MKIATWNVNSLN----------------VRLPQVSDWLAAHQPDILVLQELKLEQD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  R++      +    +  +A+  ++     Q+       D   R    
Sbjct: 41  ------KYPAAAFRMMGWHTAWAGQKTYNGVAIISRHPLQDVQTGLPALPDDPQQR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +      I V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 91  -VIAATIN----DIRVINVYCVNGEALDSPKFAYKR------QWFAALTEYVRDQLAQHP 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++  +              +  +  
Sbjct: 140 KLVLLGDFNIAPADDDVYDPQRWHEKILCSGEERQWFANLLNLGLHDALRHIYPTGAH-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L   +        D      +R SDH P+ 
Sbjct: 199 TWWDYRGAMFAKGLGLRIDHLLISPALRDSLRSVNI-------DSEARAQERPSDHAPVV 251

Query: 300 ID 301
            +
Sbjct: 252 AE 253


>gi|148242745|ref|YP_001227902.1| exodeoxyribonuclease III [Synechococcus sp. RCC307]
 gi|147851055|emb|CAK28549.1| Exodeoxyribonuclease III [Synechococcus sp. RCC307]
          Length = 275

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 96/305 (31%), Gaps = 69/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   S  + L ++ +    D++ LQE    +A    
Sbjct: 1   MRIATWNVN----------------SIRSRQSHLLRWLEQAKPDVLGLQETKVEDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKDSFSRA 140
                     +      +    S    +  +A+  +      +      L G + +   +
Sbjct: 41  ------QFPAAAMEEAGYRTVISGQKSYNGVALLSREPLEEVRIGFDALLPGDEAAIELS 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +R +   V+     + VL++++ +   + S +  Y  +          L+ ++  ++E
Sbjct: 95  QQKRVISAWVD----GVRVLNLYVPNGSEVGSEKYAYKLA------WLDCLRRYLDVQRE 144

Query: 201 SLVPFVIAGDFNRKINYLGNN------------DDFWKTIDP--NDSLIRFPKEKDSRCN 246
              PF + GDFN        +            D   + +     D L    +  +    
Sbjct: 145 QGEPFCMLGDFNIGPEARDLHNPERSTGGIMASDAEREALKACLGDDLRDAFRMFEQGSG 204

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  +D+   +  +              +   ++ SDH P
Sbjct: 205 HWSWWDYRSGAWNGDRGWRIDHLYLDEELQQRALACEIH-------KSERGLEKPSDHAP 257

Query: 298 ISIDY 302
           +S+D 
Sbjct: 258 VSVDL 262


>gi|330508676|ref|YP_004385104.1| extracellular nuclease [Methanosaeta concilii GP-6]
 gi|328929484|gb|AEB69286.1| extracellular nuclease, putative [Methanosaeta concilii GP-6]
          Length = 596

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 95/325 (29%), Gaps = 45/325 (13%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD------YTLLRQYAKNLDADIV 69
               V  ++R+ S N+       G      S +   S+         + Q   ++ AD++
Sbjct: 278 NPEPVGGRLRIASLNLENYFNGNGAGRGFPSARGARSNGEFELQRAKIIQAITDMKADVI 337

Query: 70  FLQEMGSY-----NAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            L E+ +      +A+  +              +   +   S +  ++ I   +   +  
Sbjct: 338 GLIEIENDGYGNLSAIHDLCDGLNAREDGIGLENYSFVDPGSPKLGDDLISVGLIYNRTT 397

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK----KIWVLDIHLKSFCFLDSLENT 176
           +R + ++        S      R+ +    E         + V+ +  K+    D + N 
Sbjct: 398 IRPIGKAATTSMGAFSSGN---RQPLAQTFEEISTLERLTVVVVHLKSKNPPGGDEVANG 454

Query: 177 YSPSCSL--------LSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWK 226
            +  C           ++ A  L DW++          ++I GD N   N          
Sbjct: 455 DNRDCGDGQGYWNGDRTRAANELIDWLSSDPTGSHDPDYLILGDMNSYRNEDPI-----M 509

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL------- 279
            +     + +      S   +         +D+ +   +    +   S   I        
Sbjct: 510 ALKRAGYVNQISSLLASNSYSYVFQGRWGELDHILASPSLTGQVTGASIWHINSDESPDF 569

Query: 280 -YNEDDIKSRGKRLSDHCPISIDYD 303
            Y+         R SDH P+     
Sbjct: 570 GYSGIWSSPDKYRCSDHDPLIAGIS 594


>gi|206562314|ref|YP_002233077.1| putative extracellular endonuclease/exonuclease/phosphatase family
           protein [Burkholderia cenocepacia J2315]
 gi|198038354|emb|CAR54309.1| putative extracellular endonuclease/exonuclease/phosphatase family
           protein [Burkholderia cenocepacia J2315]
          Length = 604

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 87/316 (27%), Gaps = 48/316 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+       G+    +                   +    K +DAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +      +   + R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRVVDPGTSRLGGDAIAVALIYDSRKVE------PVGRAA 406

Query: 135 DSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185
                  NR+ +     +   N + + V   HLKS    D+  +               +
Sbjct: 407 TLAIDDKNRQPLAQSFRLVNGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A  + DW+            ++ GDFN             + ++         +   +
Sbjct: 467 RAAAKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPI-----RALESRGYRNLVARWIGA 521

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------- 288
              +         +D+ +        +       I  +E                     
Sbjct: 522 NAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYA 581

Query: 289 --GKRLSDHCPISIDY 302
               R SDH P+ ID 
Sbjct: 582 ADAYRSSDHDPVLIDI 597


>gi|262406033|ref|ZP_06082583.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294646465|ref|ZP_06724105.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CC 2a]
 gi|294806878|ref|ZP_06765703.1| Ser/Thr phosphatase family protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|262356908|gb|EEZ05998.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638200|gb|EFF56578.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CC 2a]
 gi|294445907|gb|EFG14549.1| Ser/Thr phosphatase family protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 611

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 80/304 (26%), Gaps = 63/304 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L +   L          +RL+++NI   +  + +             +  +    
Sbjct: 4   MKKIFLLISAILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52

Query: 62  KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   D+V +QE+ S    +    V  +   C                       I +  
Sbjct: 53  NNASPDVVAIQEVDSMTRRSGQKYVLGEIAECTQMHACFAPAIE----FEGGKYGIGLLA 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K V +  Q+ PL G      R   R  +    E           HL              
Sbjct: 109 KQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHLSLTEED-------- 150

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                  +  + +K  I   K+   P  +AGD N +                 +    F 
Sbjct: 151 -----RMKSLEIVKSLIASCKK---PLFLAGDMNAEPESDFIK----------ELQKDFQ 192

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +   +       K  IDY    +         S   +              SDH PI
Sbjct: 193 ILSNPEKHTYPAPDPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRPI 243

Query: 299 SIDY 302
            ++ 
Sbjct: 244 LVEL 247


>gi|153805833|ref|ZP_01958501.1| hypothetical protein BACCAC_00070 [Bacteroides caccae ATCC 43185]
 gi|149130510|gb|EDM21716.1| hypothetical protein BACCAC_00070 [Bacteroides caccae ATCC 43185]
          Length = 608

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 81/304 (26%), Gaps = 63/304 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +L +   L   +A     ++L+S+NI   +  + V            ++  +    
Sbjct: 1   MKKNLLFIFAALFTFSAQAQNTLKLMSYNIKNANGMDNVC-----------NFQRIANVI 49

Query: 62  KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   D+V +QE+    + +    V  +                     +     I +  
Sbjct: 50  NNASPDVVAIQEVDSMTNRSGQKYVLGEIADRTQMHGYFAPAID----YDGGKYGIGLLT 105

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K V +  Q+ PL G      R   R  +                        +       
Sbjct: 106 KQVPLRLQTLPLPG------REEARTLILAEFTD-------YIYCCTHMSLTEEDR---- 148

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                     + L+        S  P  +AGD N +                 +    F 
Sbjct: 149 ---------MKSLELVKAFTSSSTKPLFLAGDMNAEPESGFIK----------ELQKDFQ 189

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              + + +       K  IDY    +   K     S   I              SDH PI
Sbjct: 190 ILSNPKQHTFPAPDPKETIDYIATLKQNAKGFAVISAKVIN---------EPMASDHRPI 240

Query: 299 SIDY 302
            ++ 
Sbjct: 241 LVEL 244


>gi|221639069|ref|YP_002525331.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131]
 gi|221159850|gb|ACM00830.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131]
          Length = 268

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 88/303 (29%), Gaps = 68/303 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ ++NIN                   +    L  + +  + D+V LQE+ S   V +
Sbjct: 9   PMKIATFNING----------------VKARLEALLAWLEAAEPDVVLLQEIKS---VDE 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP+       +                   +A+  +              +D  +R   
Sbjct: 50  GFPR-------AAFEEKGWHLETHGQKGFNGVAILSRLPLEDVVRGLPGDPEDVQARW-- 100

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +E  V +  + + V  ++L +       +  Y           + +K    +   + 
Sbjct: 101 ---IEATV-VGERAVRVCGLYLPNGNPAPGPKYDYK------LGWMERMKTRAAELLATE 150

Query: 203 VPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P V+AGD+N                       +   ++ I        F        + 
Sbjct: 151 EPVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAFRRILNLGYTEAFRARTFGPGHY 210

Query: 248 NKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +            N I ID+ ++   A   +            D     G++ SDH P+ 
Sbjct: 211 SFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDV-------RIDREVRSGEKPSDHVPVW 263

Query: 300 IDY 302
           ++ 
Sbjct: 264 VEL 266


>gi|113969876|ref|YP_733669.1| PKD domain-containing protein [Shewanella sp. MR-4]
 gi|113884560|gb|ABI38612.1| PKD domain containing protein [Shewanella sp. MR-4]
          Length = 948

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 92/333 (27%), Gaps = 56/333 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADIVFLQ 72
           +    +++ S+N+      +G      + +              +      + AD+  L 
Sbjct: 455 AEGGNLKVASFNVLNYFNGDGQGGGFPTSRGANTLSEFERQKAKIVSAMVGISADVFGLM 514

Query: 73  EMGSYNA------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           E+ +               +     +N +          N S   ++  I   +  R   
Sbjct: 515 EIENDGFGANSAIADLVAGLNAAVGENRYAYVIPKVNGSNLSAIGTD-AITVGLIYRSDK 573

Query: 121 V-------RVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK-----SF 167
           V        +   + PL    +  F  + NR  +     +NG +  V+          S 
Sbjct: 574 VSPQGDARILSSANSPLDDAGQPQFDDSKNRPMLTQAFALNGSEESVVVAVNHLKSKGSE 633

Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           C  D   N    +C+   ++ A     WI  +       ++ GD N              
Sbjct: 634 CAGDPDMNDGQGNCNITRTRAATAAGQWIAAQYPE-QGVLLIGDLNSYAKEDP-----LS 687

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +        F K + +   +         +D+ + +      ++  +   I  +E  + 
Sbjct: 688 ALANAGFSELFAKLEKANPYSYVFSGESGQLDHALANAALVDKVLDVTEWHINTDEPRVL 747

Query: 287 SRG-----------------KRLSDHCPISIDY 302
                                R SDH P+ I  
Sbjct: 748 DYNEEFKTAAQVQDLYASDAYRSSDHDPVVISL 780


>gi|291515920|emb|CBK65130.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 293

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 91/320 (28%), Gaps = 54/320 (16%)

Query: 1   MIRKYVL-ALVFFLVPCT---------------ASVAQKVRLVSWNINTLSEQEGVSLWK 44
           M +   L AL+  +V CT                   + +R++++NI         +   
Sbjct: 1   MKKTICLWALLLIVVSCTNDDNYNDEHGDKAVIPPKGRIIRIMTYNIYGARATSPANAAD 60

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
                         +  +  D D V L E+  +             +        + SK 
Sbjct: 61  LDAL---------AEVIRRQDPDFVTLNEVDVFTNRTGKDVHQARDLAAKLGMEWHFSKA 111

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
              +      AV  K+  +  +SY L  A        +R    + VEI+GK ++V   HL
Sbjct: 112 IDRDGGEYGDAVLSKHPIIETRSYRLPCAASQPG--EDRSLCVIRVEIDGKDLYVASTHL 169

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
                  S              QA  ++     + +     ++AGD N   +        
Sbjct: 170 DHLSGDAS-----------RLVQANEIRRIRDTELDGD--LILAGDLNAIPSSNVI---- 212

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                                    +      IDY +     +  +   +      +  D
Sbjct: 213 ------ATMTAFLTNVGTIDQYTFPSENPTRKIDYILYAPIGHFGVQNCTVV----SRSD 262

Query: 285 IKSRGKRLSDHCPISIDYDF 304
            +  G   SDH P+  D  F
Sbjct: 263 QQVDGVDASDHRPVVADIRF 282


>gi|254248065|ref|ZP_04941386.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184]
 gi|124872841|gb|EAY64557.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184]
          Length = 327

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 85/319 (26%), Gaps = 52/319 (16%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVF 70
            L+         +RL+ WNI    + +GV            D        + L D D++ 
Sbjct: 32  VLLAAADQGDSTMRLIDWNIQWGRDADGV-----------VDLPRTVAAIRRLGDFDVLC 80

Query: 71  LQEM----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           LQE+             +  A++                  + R          A+  + 
Sbjct: 81  LQELTRGFDALPGRPGPDQFAELAALLPGYTIVDAIGADLPAIRPGAPRRQFGNAIATRL 140

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                    L    D+ + +  R A+++ ++ +   + V+  HL+ +            +
Sbjct: 141 PVGRVLRQSLPWPADAGAPSMPRAALDIELQASFGSLRVVTTHLEYYSARQ--RLAQVDA 198

Query: 181 CSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPN 231
                ++A    D     +    PF         ++ GDFN   +            D  
Sbjct: 199 LRDRHREACAHADQPAPAETPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRFLEPIADAP 258

Query: 232 DSLIRFPKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
             +  +                         +  D+  +       +I            
Sbjct: 259 GFVDAWIARHPGHTPPPTAGIYDTVQWSDGPLACDFVFVTDTLLPRVIGCEI-------- 310

Query: 284 DIKSRGKRLSDHCPISIDY 302
                  R SDH P+ ++ 
Sbjct: 311 ---DGDVRASDHQPVLLEL 326


>gi|27365439|ref|NP_760967.1| exonuclease III [Vibrio vulnificus CMCP6]
 gi|27361587|gb|AAO10494.1| exodeoxyribonuclease III [Vibrio vulnificus CMCP6]
          Length = 268

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 87/310 (28%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPVEDVEAMGYKVYFHGQKAHYGVALLCKQEPIEIQK----GFPTDNDEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++  G+K+ VL+       F       +        Q  + L  ++T  +++  
Sbjct: 91  MIIGTFLDEKGEKVTVLN-----GYFPQGDNIAHETKFPYKRQFYKDLMGYLTTHRDNGE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++     ++ +T+        F K   
Sbjct: 146 QVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSFQPEEREWLQTLLDWGLEDTFRKLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           S  +       +           ID  +   +      +        + D      ++ S
Sbjct: 206 SVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAAQCRES-------DIDYELRGIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   ++
Sbjct: 259 DHAPIWATFE 268


>gi|316933979|ref|YP_004108961.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
 gi|315601693|gb|ADU44228.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
          Length = 263

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 87/303 (28%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  + K+  +D+V LQE+   +     
Sbjct: 1   MRIATWNVN----------------SVRQRLDHLLTWLKDSQSDVVCLQEIKCVDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K               D  +R    
Sbjct: 42  -------FPREPIEALGYNVVTHGQKTFNGVALLSKYPLEEANPGLAGDDGDVHARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V +    + V  ++L +   + S +  Y  S          L+D+  Q+  +  
Sbjct: 92  --LEGVVSLKHGVVRVACLYLPNGNPVGSEKYPYKLS------WMARLRDYAQQRLRTEE 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGDFN                   +     + ++ +             D+     
Sbjct: 144 PLILAGDFNVIPQPGDVHNPAAWTEDALFRPETRESFQALLGLGFTDALRATTDAPGQYT 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + ID+ ++   A   L            D      ++ SDH P+  
Sbjct: 204 FWDYQAGAWQKNWGLRIDHLLLSPQAADRLRHVGI-------DSYVRNWEKPSDHVPVWA 256

Query: 301 DYD 303
           D D
Sbjct: 257 DLD 259


>gi|153808554|ref|ZP_01961222.1| hypothetical protein BACCAC_02849 [Bacteroides caccae ATCC 43185]
 gi|149128876|gb|EDM20093.1| hypothetical protein BACCAC_02849 [Bacteroides caccae ATCC 43185]
          Length = 365

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 106/355 (29%), Gaps = 68/355 (19%)

Query: 2   IRKYVLALVFFLV-PCTASVAQKVR--LVSWNINTLSEQEGVSLWKNSV----------- 47
            ++  +A++FF++  CT S AQ++R  +VSWN+  L +    SL  +             
Sbjct: 22  RKRAAMAIIFFVMGFCTLSFAQQIRFRVVSWNVENLFDIHHDSLKNDREFLPDALRHWNY 81

Query: 48  KRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERL 98
            R     T + +    +       +V L E+ +   +  +       +  +    +    
Sbjct: 82  TRYKKKLTDMARVITAVGEWEPPALVGLCEVENDTVLRDLTRRSPLKELNYRYVMTDSPD 141

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKI 157
           +          I  A+  ++   ++L   +  +           R  + +  + + G  +
Sbjct: 142 L--------RGIDVALLYQRDLFKLLS--FRSVSIPPLKQFRPTRDLLHVSGLLLTGDTL 191

Query: 158 WVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
            V   HL S          Y   +  +L  +A  + +            +I GDFN    
Sbjct: 192 DVFVCHLPSRSGGAKESEPYRLHAARILYTEADSILN-----IRLHPQIIIMGDFNDYPT 246

Query: 217 YLGNNDDFWKTIDPND-------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
                                    +   K +     + K       +D+ ++  +    
Sbjct: 247 NKSIQKILEAESPSPTAPSPLKLYHLLARKAQSKNFGSYKYRGEWGLLDHLIVSGSLLNP 306

Query: 270 LIQESFSE---------------------ILYNEDDIKSRGKRLSDHCPISIDYD 303
               S SE                       +           +SDH PI +D++
Sbjct: 307 ANSFSTSENKATVSNLPFLLTEDKKYGDKEPFRTYKGMKYQGGISDHLPIYVDFN 361


>gi|224026812|ref|ZP_03645178.1| hypothetical protein BACCOPRO_03569 [Bacteroides coprophilus DSM
           18228]
 gi|224020048|gb|EEF78046.1| hypothetical protein BACCOPRO_03569 [Bacteroides coprophilus DSM
           18228]
          Length = 288

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 80/317 (25%), Gaps = 42/317 (13%)

Query: 1   MIRKYVLALV----FFLVPCTASVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M +  ++ L          C     +K+ +   ++NI   +  + ++ WK          
Sbjct: 1   MKKLLIICLAGISGILTTACQEKKTEKITVNWATFNIRYDNPADSLNNWKYRK------- 53

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             +  + K    DIV +QE+              +                +        
Sbjct: 54  DTVAAFIKANQLDIVGMQEVLHNQLEDLKQRLPEYAEVGVGREDGKTQGEYAPLFYRKDR 113

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
                +       YP       +  A  R A    ++        + ++     F     
Sbjct: 114 FEALDSNTFWLSQYPDSVGFIGWDGACTRIATWAKLKDRKTGKIFMAVNTH---FDHIGV 170

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                S  L+ Q+ + +            P V+ GDFN    +         +    D+ 
Sbjct: 171 EARKNSALLIIQKIKEIV--------GDQPAVLTGDFNVSDQWDAYTTITTNSFVLKDAY 222

Query: 235 IRFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
               K++                   +  ID+  +                     + + 
Sbjct: 223 KIADKQEGVN---YTFHDFGREPIDKREKIDFIFVTPQIKVKDTSIP--------QESQG 271

Query: 288 RGKRLSDHCPISIDYDF 304
               LSDH P     +F
Sbjct: 272 ETGFLSDHNPQLATLEF 288


>gi|120599204|ref|YP_963778.1| endonuclease/exonuclease/phosphatase [Shewanella sp. W3-18-1]
 gi|120559297|gb|ABM25224.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. W3-18-1]
          Length = 944

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 50/333 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67
           V  T      +++ S+N+      +G      + +              +      + AD
Sbjct: 450 VAPTLVDGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509

Query: 68  IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120
           +  L E+ +      +A+A +       +  +    I  +       + I   +  R+  
Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGINAIGTDAITVGLIYRRDK 569

Query: 121 V-------RVLQQSYPLLGAKDS-FSRAGNRRAVELLVEING--KKIWVLDIHLKSF--- 167
           V        +   + PL   +   F+   NR  +     +NG  + + V   HLKS    
Sbjct: 570 VTPKGAARILSSANSPLDDNQQPLFNDTRNRPMLTQAFSVNGSDEGVVVAVNHLKSKGSE 629

Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           C  D   N    +C+   ++ A  +  W+ ++       ++ GD N              
Sbjct: 630 CAGDPDLNDGQGNCNSTRTRAATAVGQWLGEQYPE-QGVLLIGDLNAYAKEDP-----LT 683

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +        F + +               +D+ + +      ++  +   I  +E  + 
Sbjct: 684 ALANAGFSELFAELRKPNPYTYVFSAESGQLDHALANAELLDKVVDVTQWHINTDEPRVL 743

Query: 287 SRG-----------------KRLSDHCPISIDY 302
                                R SDH P+ I  
Sbjct: 744 DYNEEFKTPAQIQDLYSTDAYRSSDHDPVVISL 776


>gi|237717266|ref|ZP_04547747.1| metallophosphoesterase [Bacteroides sp. D1]
 gi|229443249|gb|EEO49040.1| metallophosphoesterase [Bacteroides sp. D1]
          Length = 608

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 80/304 (26%), Gaps = 63/304 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L +   L          +RL+++NI   +  + +             +  +    
Sbjct: 1   MKKIFLLISAILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 49

Query: 62  KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   D+V +QE+ S    +    V  +   C                       I +  
Sbjct: 50  NNASPDVVAIQEVDSMTRRSGQKYVLGEIAECTQMHACFAPAIE----FEGGKYGIGLLA 105

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K V +  Q+ PL G      R   R  +    E           HL              
Sbjct: 106 KQVPLRLQTIPLPG------REEARTLILAEFE----DYIYCCTHLSLTEED-------- 147

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                  +  + +K  I   K+   P  +AGD N +                 +    F 
Sbjct: 148 -----RMKSLEIVKSLIASCKK---PLFLAGDMNAEPESDFIK----------ELQKDFQ 189

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +   +       K  IDY    +         S   +              SDH PI
Sbjct: 190 ILSNPEKHTYPAPDPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRPI 240

Query: 299 SIDY 302
            ++ 
Sbjct: 241 LVEL 244


>gi|117920043|ref|YP_869235.1| PKD domain-containing protein [Shewanella sp. ANA-3]
 gi|117612375|gb|ABK47829.1| PKD domain containing protein [Shewanella sp. ANA-3]
          Length = 948

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/337 (12%), Positives = 92/337 (27%), Gaps = 56/337 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADI 68
               +    +++ S+N+      +G      + +              +        AD+
Sbjct: 451 SPVLAEGGNLKVASFNVLNYFNGDGQGSGFPTARGANTLSEFERQKAKIVSAMVGTSADV 510

Query: 69  VFLQEMGSYNA------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
             L E+ +               +     +N +          N S   ++  I   +  
Sbjct: 511 FGLMEIENDGFGANSAIADLVAGLNAAVGENRYAYVIPKVNGSNLSAIGTD-AITVGLIY 569

Query: 117 RKKNV-------RVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK--- 165
           R   V        +   + PL    +  F  + NR  +     +NG +  V+        
Sbjct: 570 RSDKVSPQGDARILSSANSPLDDAGQPLFDDSKNRPMLTQAFVLNGSEESVVVAVNHLKS 629

Query: 166 --SFCFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
             S C  D   N    +C+   ++ A     WI ++       ++ GD N          
Sbjct: 630 KGSECAGDPDMNDGQGNCNITRTRAATAAGQWIAEQYPE-QGVLLIGDLNSYAKEDP--- 685

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                +        F K + +   +         +D+ + +      ++  +   I  +E
Sbjct: 686 --LSALANAGFSELFAKLEKANPYSYVFSGESGQLDHALANTALVDKVVDVTEWHINTDE 743

Query: 283 DDIKSRG-----------------KRLSDHCPISIDY 302
             +                      R SDH P+ I  
Sbjct: 744 PRVLDYNEEFKTAAQVQDLYASDAYRSSDHDPVVISL 780


>gi|320086216|emb|CBY95990.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 292

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 81/313 (25%), Gaps = 75/313 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 22  AVTMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 62

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++FP             + ++        H  +A+  K   +  +              
Sbjct: 63  DEMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEE 110

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      I V++       F       +       +Q  Q L++++  + +
Sbjct: 111 AQRRIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELK 165

Query: 201 SLVPFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFP 238
              P +I GD N                               +   + +     +  F 
Sbjct: 166 CDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLK-WGLVDTFR 224

Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +      +       +           ID  +      +   +          D      
Sbjct: 225 EANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSM 277

Query: 290 KRLSDHCPISIDY 302
           ++ SDH P+   +
Sbjct: 278 EKPSDHAPVWATF 290


>gi|312130952|ref|YP_003998292.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
 gi|311907498|gb|ADQ17939.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
          Length = 274

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 80/284 (28%), Gaps = 29/284 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +++ + S+N+   + ++G + W N          ++++  K  + DI   QE   +  + 
Sbjct: 19  KELIVASYNLRMDTPKDGPNAWPNRK-------EMVKELIKYHEFDIFGTQEGFIHQ-LN 70

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +    S       +   S             +        P    K   +   
Sbjct: 71  DISELKEYAFTGSGRDDGKQAGEHSAIFYRKKRFKLLDSGDFWLSEDPDKPGKGWDATCC 130

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           NR A     +    K      ++    F          S  L+  + Q +          
Sbjct: 131 NRIASWGKFKDLKTKKTFYFFNVH---FDHQGIVARRESGQLMISKIQEIA--------G 179

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-KIPIDYF 260
             P ++ GDFN                D   S I  P       N+ K     K  IDY 
Sbjct: 180 KFPVILTGDFNSLPETDQIKAISGLLKDAYTSSIAPPYGPVGTANSFKLDAPLKNRIDYI 239

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +           +   + Y         +  SDH PI+    F
Sbjct: 240 FVSG---------TMEVLKYASLTDHKDQRYPSDHLPIAAKIRF 274


>gi|298291878|ref|YP_003693817.1| exodeoxyribonuclease III [Starkeya novella DSM 506]
 gi|296928389|gb|ADH89198.1| exodeoxyribonuclease III [Starkeya novella DSM 506]
          Length = 262

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 80/306 (26%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ +WN+N                           +      D+V LQE+         
Sbjct: 1   MRIATWNVN----------------SVKQRLEHAVAWLGETRPDVVCLQEIKCVDEAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    + +                      +AV  +       S      +D  SR  
Sbjct: 45  EAFESLGYNVAVH------------GQKGFNGVAVLSRLPFDEVSSGLPGDDEDVQSRF- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E++V        +  I+L +   +D+ +  Y           + LK  +  +   
Sbjct: 92  ----IEVVVSTPEGVARICGIYLPNGNPVDTEKYPYK------LNWMKRLKAHVANRLAY 141

Query: 202 LVPFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFP-----------KEKDSRCNA 247
             P ++ GD+N      +           +    +   F            +        
Sbjct: 142 EEPLIVCGDYNVIPEPVDAANPAAWVNDALFLPQTRSAFRELIHLGMTEAVRATTDEPGL 201

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   L            D      ++ SDH P+
Sbjct: 202 YSFWDYQAGAWQKNNGIRIDHLLLSPQAADRLKAVGI-------DKHVRAWEKPSDHVPV 254

Query: 299 SIDYDF 304
            +D  +
Sbjct: 255 WVDLAY 260


>gi|254524231|ref|ZP_05136286.1| endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas sp. SKA14]
 gi|219721822|gb|EED40347.1| endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas sp. SKA14]
          Length = 295

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 82/281 (29%), Gaps = 36/281 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V++N++   E               S    +    K L  D V LQE+     V   
Sbjct: 47  MSMVTFNLHHDRED------------WPSRRRTILAELKRLQPDAVALQEVIQRRNVR-- 92

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  W       R +  S            A+  +   +    + L    D       R
Sbjct: 93  -NQAQWLASQLGYRYVFVSTDPVGAPKRYGNALLTRRPILAHGDHLLQPLDDY------R 145

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L ++++G  + V   HL         E        +   Q + L  +I+    +  
Sbjct: 146 TVAHLRIDVDGTPVNVYATHLN--------ERNDERGQGIRRSQVEDLLRYISTT-SAGA 196

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P VIAGDFN  ++    ++      D   S+                 +    ID+    
Sbjct: 197 PVVIAGDFNALVDAGDLSELRSHYGDSYGSVHVNTDLAGVSTLNRHYYQAPSRIDHIFFQ 256

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Q+           E     D     G+  SDH  +     F
Sbjct: 257 QDEMV------AREAKLLFDQPDDSGRWASDHYGVWTRLQF 291


>gi|74318784|ref|YP_316524.1| hypothetical protein Tbd_2766 [Thiobacillus denitrificans ATCC
           25259]
 gi|74058279|gb|AAZ98719.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 281

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 84/305 (27%), Gaps = 49/305 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEM-------G 75
           ++L+SWNI      +G             D   L +  ++L A D++ LQE+        
Sbjct: 1   MKLLSWNIQWGRGMDG-----------RVDLARLVRAIEHLGAFDVICLQEVAVNFPALP 49

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 +          Y+   +       ++       A+  +        + L    +
Sbjct: 50  GSRGEDQFAQLAAALPGYTALYVAATDVPGASGRSRFGNAIFSRLPVGQVWRHALPWRPE 109

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +   +  R  +E ++      + VL  HL+ +            +   L  +A  +  W 
Sbjct: 110 AGVPSMQRALLEAVILREAGPLRVLTTHLEYYSQGQRQL--QIEAIRNLHAEACAMTRWA 167

Query: 196 TQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPN--------DSLIRFP 238
             ++E   PF         ++ GD N   +            D                P
Sbjct: 168 APEEERGGPFASQGRPAQAILCGDMNFSPSAAERARLLAPFADATPAWVDAWTALHPGVP 227

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +    + +    D+    +     L            D         SDH P+
Sbjct: 228 HPPSVGIHPVDFVDHPECFDFVFATEGLSAAL-----------SDYGVDAETEASDHQPV 276

Query: 299 SIDYD 303
            +  D
Sbjct: 277 WVALD 281


>gi|255010722|ref|ZP_05282848.1| hypothetical protein Bfra3_16398 [Bacteroides fragilis 3_1_12]
          Length = 344

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/349 (12%), Positives = 91/349 (26%), Gaps = 57/349 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSV-----------K 48
           M+R + L L+       ++  Q   R+V WN     +    SL  +              
Sbjct: 1   MLRLFFLLLISSTSLFLSAQNQPPFRVVFWNTENFFDTRHDSLKNDREFLPHSLRHWGYS 60

Query: 49  RTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
           R       + +    +       ++ L E+ +   +  +     +      +     +  
Sbjct: 61  RYKKKIDNVARTLAAVGEWNFPVLIGLCEVENDTVMRDL---TLYSPLKEADYRYVMTHS 117

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIH 163
                I  A+  ++   ++L  +   +   +  +    R  + +  + + G  + VL  H
Sbjct: 118 SDQRGIDVALLYQRDRFKLL--TCSSIPVGNFENHRPTRDILHVSGLLLTGDTLDVLVAH 175

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNN 221
           L S             S       AQ LK+              +I GDFN         
Sbjct: 176 LPSRSGG------ARQSEPYRLFAAQKLKNAADSLMCVRRSAKLIIMGDFNDYPTDKSVK 229

Query: 222 DDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                     +            K K+    + K       +D+ ++             
Sbjct: 230 QVLKALSPEENPDHKQLYHLLARKAKNRNFGSYKYQGEWGLLDHLIVSGTLLDTSGTLFT 289

Query: 276 SEI---------------------LYNEDDIKSRGKRLSDHCPISIDYD 303
            E                       +            SDH P+  D++
Sbjct: 290 EEKKASVLRLPFLLIKDEKYGGMQPFRTYIGMKYQGGYSDHLPVYTDFE 338


>gi|237747770|ref|ZP_04578250.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13]
 gi|229379132|gb|EEO29223.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13]
          Length = 255

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 88/304 (28%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      + Q+ ++   D++ LQE    +     
Sbjct: 1   MKIATWNVNSL----------------KVRLPHVLQWLEDNPVDVLCLQETKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    +    +  +A+  K               +       +
Sbjct: 41  ------KFPVMEIGAAGYQVAFTGQKTYNGVAILSKKPVTDIVKN------NPLFPDEQQ 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R V   V+     I ++  ++ +   + S + +Y           + L  W+ ++++   
Sbjct: 89  RIVAATVDN----IRIVCAYVPNGQAVGSEKYSYKLD------WLRSLTQWLAEERQKHP 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GD+N                         D ++ +   D +  + +  +    + 
Sbjct: 139 YLALLGDYNIAPEDRDVYDPVAWEGNVLVSPPERDAFRALQDIDFIDAY-RLFEQPEKSY 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++ +         +        D I  +  + SDH P+ 
Sbjct: 198 SWWDYRQLGFQKNRGLRIDHILLSKALAPHCTACTI-------DRIPRKWTQPSDHTPVI 250

Query: 300 IDYD 303
            + D
Sbjct: 251 AELD 254


>gi|258648749|ref|ZP_05736218.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           tannerae ATCC 51259]
 gi|260851066|gb|EEX70935.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           tannerae ATCC 51259]
          Length = 337

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/346 (10%), Positives = 92/346 (26%), Gaps = 56/346 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50
           +++ +    +  +    + ++  R++++N+    +       ++              + 
Sbjct: 1   MKRLLFVFFYLCLLTAGAQSR-FRVMTYNVENAFDTIHDEGKQDFDFLPTGRLHWDTPKY 59

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
            +  + +      +       +V L E+ +   +  +         +S       ++   
Sbjct: 60  RAKLSRIASVIAGVGEMQPPKLVALCEVENARVIEDLL---HHTRLHSFNYRYCMTESAD 116

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLK 165
              I  A+  +     +L      +   +       R  + +  +  +G  + V  +HL 
Sbjct: 117 RRGIDVALLYQPSTFHLLYMDTLRVIPANKHEN-PTRDILHVCGLVPSGDTLSVFVVHLP 175

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDD 223
           S             +     + AQ L+  I     +      VI GDFN +         
Sbjct: 176 SRRGGV------RRTMPYRCRVAQRLRQEIDGLTRNGRDRKVVIMGDFNDEHTDPSIATV 229

Query: 224 F----WKTIDPNDSLIRFPKEKDSRC---NANKNLRNKIPIDYFVMDQNAYK-------- 268
                W        L     +  +       +K       +D  +++             
Sbjct: 230 LEARKWTDAIQPPFLCVLTADLKAANGIQGTHKFQGRWAQLDQIIVNDRLLTTEGLHTSP 289

Query: 269 ------------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                + Y            SDH P+ +D+
Sbjct: 290 KDCFIFTDAPLLKYDAGDHGVVPYRSFLGSFYQGGFSDHLPVVVDF 335


>gi|254495120|ref|ZP_05108044.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
 gi|85819470|gb|EAQ40627.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
          Length = 325

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 99/296 (33%), Gaps = 44/296 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
             + ++NI  LS                ++   +++  + ++ DI+  QE+    +    
Sbjct: 54  FSIATYNIGYLSGMTNNRPVPKPKSLFKANLQKVKKETQAVNPDIIAFQEIDYNASRSYH 113

Query: 81  ---AKVFPKNTWCIFYSTERLINHSKRDSNNDI-------HTAIAVRKKNVRVLQQSYPL 130
               +      +     T     +        I        +  ++  K     Q+   L
Sbjct: 114 INQEEEVASLGYNYSARTVNWDENYLPFPYWPISMHFGKVISGQSILSKYPLANQERVVL 173

Query: 131 LGAKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
              +DS          R A  +   INGK+I +++IHL++F                 ++
Sbjct: 174 SRVEDSPFYRDAFYLERLAQIVKANINGKEIVIINIHLEAFDKP------------TRAK 221

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           Q Q ++    +  ++  P ++ GDFN +     +     +T   +D++       D+  N
Sbjct: 222 QFQEVEAIFNKY-KNDYPTLLLGDFNAR---ARDKSSVVQTFFKDDNIGNAAFNYDAIAN 277

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     IDY    +             I Y    + +  ++ SDH P+ + +
Sbjct: 278 TFDTKDPYERIDYIFYTKE-----------TIEYVSGRVLNEYEQASDHLPVFMKF 322


>gi|281338153|gb|EFB13737.1| hypothetical protein PANDA_004239 [Ailuropoda melanoleuca]
          Length = 368

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 84/297 (28%), Gaps = 20/297 (6%)

Query: 18  ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            S    +R++ WNI    L E ++          +      L+ +       DI+ LQE+
Sbjct: 74  PSSHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYHPDILCLQEV 133

Query: 75  GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             Y +    +  +  +   +  +          +N     A+   +   +++  +   L 
Sbjct: 134 DHYFDTFQPLLGRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 193

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A    +      A+   +E                          +  C         L+
Sbjct: 194 AMTLKTNQ---VAIAQTLECKESSRQFCIAVTHLKARPGWERFRSAQGC-------DLLQ 243

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +       + VP ++ GDFN +            +++ + +      +  S         
Sbjct: 244 NLQNITHGAKVPLIVCGDFNAEPTEEVYKHFASSSLNLSSAYKLLSADGQSEPPYTTWKI 303

Query: 253 N-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +  +DY    Q+A +               +        SDH  +  D+ F
Sbjct: 304 RTSGECRHTLDYIWYSQHALRVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 360


>gi|260913979|ref|ZP_05920453.1| exodeoxyribonuclease III [Pasteurella dagmatis ATCC 43325]
 gi|260632066|gb|EEX50243.1| exodeoxyribonuclease III [Pasteurella dagmatis ATCC 43325]
          Length = 267

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 82/311 (26%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKIISFNINGL----------------RARPHQLEAIIERYQPDVLGLQEIKVADEVFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K      +      A+D+  R  
Sbjct: 45  ELVEHLGYHVFHH------------GQKGHYGVALLTKQEPKAVRKGFPTDAEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +    E +   + V++       F       +        +    L+ ++ +    
Sbjct: 91  ---IIMADFETDFGLLTVVN-----GYFPQGESRQHETKFPAKEKFYADLQQYLEKDHNV 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N                          L    ++   +     +  F   
Sbjct: 143 DNPIIIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFLPEEREWMNRLYGYGLVDTFRHL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID+ + + +     +                  ++
Sbjct: 203 NPDVNDKFSWFDYRSKGFDDNRGLRIDHIIANHSLAARCVDTGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH P+  ++
Sbjct: 256 PSDHAPVWAEF 266


>gi|197123175|ref|YP_002135126.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K]
 gi|196173024|gb|ACG73997.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K]
          Length = 261

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 81/285 (28%), Gaps = 55/285 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+V+WN++ L                  D   + +   ++ AD+  LQE+G+       
Sbjct: 3   FRVVTWNVHGLRGAGRRP-----------DPERIARVLDDIGADVAGLQEVGAR------ 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            P        +  RL   +        H        A+  ++     ++Y L        
Sbjct: 46  LPGADAHAAEALARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGR--- 102

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  +   +++   ++ V   HL                     Q A  L   I + 
Sbjct: 103 --EPRGCLRADLDLGPMRVHVFAAHLGLHWR------------ERRRQAAALLSADILRD 148

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P V+ GDFN   +         +T+         P                + +D
Sbjct: 149 AALSHPLVLVGDFNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWP------LLRLD 202

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +D      ++                  +R SDH P+ ++ +
Sbjct: 203 RAYVDAAL--RVLGCEVIRTPL--------ARRASDHLPLVVELE 237


>gi|86138524|ref|ZP_01057097.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. MED193]
 gi|85824584|gb|EAQ44786.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. MED193]
          Length = 331

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 103/329 (31%), Gaps = 49/329 (14%)

Query: 24  VRLVSWNINTLS----EQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMG 75
           +RLV++NI   +    + + + L   S  R   D       +    + LDAD V + E  
Sbjct: 1   MRLVTYNIEWFAHLFDDADNLMLDDQSSGRYGVDRYTQGRAIAHVLQRLDADAVMVVEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVR-------------KKNV 121
           +     +           +  R     S   ++     A+                K+  
Sbjct: 61  NTGRKQRCTRALERFAAEAGLRTDTAVSGFATDTHQEIALLYDPAVLDVEADPQASKRAP 120

Query: 122 RVLQQSYPLLGAKDSFSR-AGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENT--- 176
           R        L   D   R   ++  +EL V   G   + ++  HLKS     +       
Sbjct: 121 RFDDSFLIDLDVDDRMDRVRFSKPPLELQVRTKGGMALRLIGAHLKSKAPHGAETAEEVA 180

Query: 177 --YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226
                +      QA WL   I +  E+    ++ GD N           F K        
Sbjct: 181 RISIANRRKQLAQAIWLHRRIKEHVEAGENVIVMGDLNDGPGLDEYERLFGKSSVEIVMG 240

Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYK----FLIQESF 275
               DP+   +  P+E      +           +  +DY ++          + I   F
Sbjct: 241 AELTDPHAQSLLKPREPVLPSTSRFYNPETKRYFRALLDYIMISHGLEAYGPHWRIWHPF 300

Query: 276 SE-ILYNEDDIKSRGKRLSDHCPISIDYD 303
            +   Y++  ++      SDH P+S+D +
Sbjct: 301 EDAECYDDIPLREALLAASDHFPVSLDLE 329


>gi|282901382|ref|ZP_06309307.1| Endonuclease/exonuclease/phosphatase [Cylindrospermopsis raciborskii
            CS-505]
 gi|281193661|gb|EFA68633.1| Endonuclease/exonuclease/phosphatase [Cylindrospermopsis raciborskii
            CS-505]
          Length = 2198

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 95/335 (28%), Gaps = 55/335 (16%)

Query: 19   SVAQKVRLVSWNINTLSEQ----------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
            +V   +++  +N+    +                  +S+         L      ++AD+
Sbjct: 1655 TVGGSIKVTGFNVLNYFKTIDLPGVNTVIGQDPRGADSMDEFNRQTDKLVTALLTINADV 1714

Query: 69   VFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKN 120
            + L E+ +        N +  +  +        T   +N   +   +D I   +  +   
Sbjct: 1715 LGLVELENDFLAGSSGNGIEYLTNQLNAKAGAGTYAWVNPGTQFVGSDAIAVGLIYKPMA 1774

Query: 121  VRVLQQSYPLLGAKDSFSR----AGNRRAVELLVE--INGKKIWVLDIHLKSF------- 167
            V +L     L  ++           NR AV    +     +K  V+  HLKS        
Sbjct: 1775 VSLLGDVAILNSSEFMDPNNTGQDRNRPAVAQTFQDLATNEKFTVVVNHLKSKGASELTD 1834

Query: 168  --CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDD 223
                     +      +  ++  Q L DW+       +   +++ GDFN           
Sbjct: 1835 INSPDYDQNDGQGFWNNTRTKAIQALVDWLNTNPTKVNDSDYLLLGDFNAYAQEDPV--- 1891

Query: 224  FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
              K +     +            +         +DY     +  + +   +   I  +E 
Sbjct: 1892 --KVLKNAGYIDLASAFHQGTTASYVFDGQTGTLDYAFASASLAQQVTGATEWAINSDEA 1949

Query: 284  DIKSRG---------------KRLSDHCPISIDYD 303
            D                     R SDH P+ +  +
Sbjct: 1950 DGIDYNLDFGRDAAIFDGTTPYRSSDHDPVIVGLN 1984


>gi|56961986|ref|YP_173708.1| hypothetical protein ABC0204 [Bacillus clausii KSM-K16]
 gi|56908220|dbj|BAD62747.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 295

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/285 (10%), Positives = 83/285 (29%), Gaps = 31/285 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            K++++S+N+      +       S    +     ++ + +  + DI+  QE        
Sbjct: 33  DKMKVMSFNLRNSGGND------PSPHSWSERRPTVQSFLETEEPDILGTQEALYDQVTH 86

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +       R              +                P +    S+    
Sbjct: 87  LDEDLPDYEWIGIG-REGGTDGEFMAIYYKSDRFKPTDTGHYWLSDTPDVVGSTSWGNTI 145

Query: 142 NRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R       E    G++ + ++ H                S     + A+ + + I +  
Sbjct: 146 PRMVTWAKFEEEATGEQFYFVNTHFDH------------QSEESRQKSAELIIEKINEY- 192

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD--SRCNANKNLRNKIPI 257
           +  +P ++ GDFN   + + +     + +  +       K  +     N   +       
Sbjct: 193 DENLPIILTGDFNTTPDSVSHGILTGEGLFEDPWNYAEEKINEELGTFNGFNDPTGGG-- 250

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  N   +++ ++        +D ++  +  SDH P+  ++
Sbjct: 251 -----TDNKIDWVLTKNIFAESIGINDYRNGEQYPSDHFPVIAEF 290


>gi|289665777|ref|ZP_06487358.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 303

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 89/287 (31%), Gaps = 36/287 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +++  +++ LV+ N++   E               +    + +  K L  D++ LQE+ 
Sbjct: 40  PSSTAPREMTLVTLNLHHDRED------------WPARRAYIAKELKQLAPDVIALQEVI 87

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  V  +  W            S            A+  +   +      L    D
Sbjct: 88  ERRG--SVENQAAWLARKLGYDYTFASVDPVGAPKRYGNALLSRRNVLATHQRLLQPLDD 145

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A  L V+++G+ + V   HL         E T +   +   +Q   L D++
Sbjct: 146 Y------RVAAHLQVDVDGQPVNVYVTHLN--------ERTDARGTATRKRQVTDLLDFV 191

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                   P VIAGDFN   + L          D   S+ R      S  N         
Sbjct: 192 ASN-SEQAPVVIAGDFNTAADTLDLEALRKGYGDSYGSVHRNSDATVSTLNMQV-FDKPA 249

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+    QN           +  Y E      G+  SDH  + +  
Sbjct: 250 RIDHVFFQQNRLLAREARILFDTPYAE------GRWASDHYGVWVRL 290


>gi|224827165|ref|ZP_03700261.1| Endonuclease/exonuclease/phosphatase [Lutiella nitroferrum 2002]
 gi|224600674|gb|EEG06861.1| Endonuclease/exonuclease/phosphatase [Lutiella nitroferrum 2002]
          Length = 249

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 82/287 (28%), Gaps = 48/287 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +++ ++NI+             SV         + +   +L +D++FLQE+   N + 
Sbjct: 2   EPLKVSTYNIH----------KGMSVLNRHVRVEDMAKALDSLSSDVMFLQEVQGKNLLR 51

Query: 82  KVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +             +     R   +    S    H   AV  +                
Sbjct: 52  TLSHHEWPRIPQHQYLARQLGRKAAYGLNASYGHGHHGNAVLTRFPITS-----WCNLDI 106

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S +R  +R  +  ++E  G    V+ +                       +Q   L  +I
Sbjct: 107 SVNRFESRGVLHCVLEPPGWSTPVIALCAHLNLRAGD-----------RRKQYATLARYI 155

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                +  P ++AGDFN         +   + +  N     F         +  +    +
Sbjct: 156 RDNVPAHYPLILAGDFND-----WRGEATDRLLAENGLHEVFQHLFGQHARSFPSRLPLL 210

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D   +                        +    LSDH P+S + 
Sbjct: 211 TLDRIYVRGLRPVNAKAH-----------HGAPWNGLSDHLPLSAEL 246


>gi|187929032|ref|YP_001899519.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J]
 gi|187725922|gb|ACD27087.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J]
          Length = 269

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 91/304 (29%), Gaps = 63/304 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82
           +R+ +WN+N+L              R       L +   +    D++ LQE+   +    
Sbjct: 1   MRVATWNVNSL------------KVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYP 48

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +   +             ++   +    +  +A+  +   V +     +           
Sbjct: 49  LAELDA----------AGYTSLFTGQKTYNGVAILSRKASVPEGR--DVVKNIPGFADEQ 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +R V    +++G  + V+  ++ +   LDS +  Y        +  + L+ W+T +  + 
Sbjct: 97  QRIVAATYDVDGGPVRVISAYIPNGQALDSDKFVYK------LRWLEALQAWLTSELAAN 150

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GDFN                           ++ +     +  F   +      
Sbjct: 151 PRLMLLGDFNIAPEDRDVHDPKKWEGQNLVSPEERAAFRAMQGAGLVDAFRMFEQED-KL 209

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++     K              D +    ++ SDH P+
Sbjct: 210 FSWWDYRMFGFKRNAGLRIDHIMLSPELAKLCESCHI-------DRVPRTWEQPSDHTPV 262

Query: 299 SIDY 302
               
Sbjct: 263 VAAL 266


>gi|171914576|ref|ZP_02930046.1| Endonuclease/exonuclease/phosphatase [Verrucomicrobium spinosum DSM
           4136]
          Length = 804

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 90/281 (32%), Gaps = 44/281 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N ++    +G    +            + +   +   D+V +QE+    + ++ 
Sbjct: 550 LRVMSYNAHSCIGMDGRVSPR-----------RIARVINHYSPDLVAVQELEHGRSRSRG 598

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             + T     +   ++      +        A+  +    + ++  L     ++     R
Sbjct: 599 EDQATRVAELTGYEVVFCP-TVTRAAERYGHALLSRRPVEVVKTGLLPADPGNW-WPEPR 656

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKES 201
            A+ +   + G+ + ++  HL               S      Q   L   DW+      
Sbjct: 657 SAIWVRTTLEGQVVNMVATHLGL-------------SSRERVAQMLSLLGPDWLGPVV-E 702

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P V+ GDFN  +   G         D          +     N   +L+  I +D+  
Sbjct: 703 TEPVVLCGDFNFGVGSPGYKLAITALRDVQ-----SITKGWRPVNTFSSLQPFIRLDHVF 757

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  +     ++   +++              SDH P+  D 
Sbjct: 758 ISSHFTVEKLRVPRTQVTRV----------ASDHLPLVADL 788


>gi|332827905|gb|EGK00627.1| hypothetical protein HMPREF9455_02901 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 254

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 90/310 (29%), Gaps = 69/310 (22%)

Query: 2   IRKYVLALVFFLVPCTASVA--------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           ++K  LA  F     +               R++S+NI      + ++           +
Sbjct: 1   MKKLFLACFFMAFTFSLFAQKEQYPQKKDTFRVMSYNIRNARGMDNIT-----------N 49

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           Y  +    +++  D++ +QE+ S    +            +      +    S       
Sbjct: 50  YQRIADIIESVSPDVLAIQELDSVTRRSNGIDVLGKLSNLTGMY-AVYGAAISFQGGKYG 108

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + +  K   +  ++ PL G      +   R  + +  E +     +   HL         
Sbjct: 109 VGILSKMSPLSSRNIPLPG------KEEQRTLLVVEFEDH----IIFATHLSLT------ 152

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPN 231
           +     S  +++QQA+              P  + GD N + +          WK ++  
Sbjct: 153 KEDRKSSIEIINQQAKAY----------GKPVFLIGDLNAEPDSEEIKLLSAGWKILNNV 202

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           + +               +      IDY +            ++        D       
Sbjct: 203 EDM------------TFPSANPDRVIDYIM-----GYTETGSTYPVYHAKVLD----DSI 241

Query: 292 LSDHCPISID 301
            SDH P+ +D
Sbjct: 242 ASDHRPLFVD 251


>gi|319426026|gb|ADV54100.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens 200]
          Length = 944

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 50/333 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDAD 67
           V  T      +++ S+N+      +G      + +              +      + AD
Sbjct: 450 VAPTLVDGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509

Query: 68  IVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKN 120
           +  L E+ +      +A+A +       +  +    I  +       + I   +  R+  
Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYIAPTGINAIGTDAITVGLIYRRDK 569

Query: 121 V-------RVLQQSYPLLGAKDS-FSRAGNRRAVELLVEINGKK--IWVLDIHLKSF--- 167
           V        +   + PL   +   F+   NR  +     +NG +  + V   HLKS    
Sbjct: 570 VTPKGAARILSSANSPLDDNQQPLFNDTRNRPMLTQAFNVNGSEEGVVVAVNHLKSKGSE 629

Query: 168 CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           C  D   N    +C+   ++ A  +  W+ ++       ++ GD N              
Sbjct: 630 CAGDPDLNDGQGNCNSTRTRAATAVGQWLGEQYPE-QGVLLIGDLNAYAKEDP-----LT 683

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +        F + +               +D+ + +      ++  +   I  +E  + 
Sbjct: 684 ALANAGFSELFAELRKPNPYTYVFSAESGQLDHALANAKLLDKVVDVTQWHINTDEPRVL 743

Query: 287 SRG-----------------KRLSDHCPISIDY 302
                                R SDH P+ I  
Sbjct: 744 DYNEEFKTPAQIQDLYSTDAYRSSDHDPVVISL 776


>gi|314934911|ref|ZP_07842270.1| sphingomyelin phosphodiesterase [Staphylococcus caprae C87]
 gi|313652841|gb|EFS16604.1| sphingomyelin phosphodiesterase [Staphylococcus caprae C87]
          Length = 329

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 98/318 (30%), Gaps = 33/318 (10%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
             +LA         +     +++ + N+  L      +L+ N  +   +D      Y + 
Sbjct: 20  SLLLAFSTITHANESKSEDSLKITTHNVYFLPT----ALYPNWGQSQRADLISKANYIQ- 74

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIA 115
            D D+V   E+    A  ++         Y T  +   +                   + 
Sbjct: 75  -DQDVVIFNELFDKKASNRLLTNLQSQYPYQTPIVGKGTDGWQKTSGTYRKVKPVSGGVG 133

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  K   V Q+ +       +  +AGN+    + +  NGK   ++  HL++    +    
Sbjct: 134 IVSKWPIVEQEQHIYKDGCGA-DKAGNKGFAYIKINKNGKYQHIIGTHLQA----EDPIC 188

Query: 176 TYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                  +   Q   +K +I  +      P  I GD N  I          + ++ +   
Sbjct: 189 IKGKDKKIRQSQMDEIKQFIKDKHIPKNEPVYIGGDLNV-IKGSEEYQQMPENLNVSLPT 247

Query: 235 IRFPKEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                       +N   +          +DY ++D++  +     +    + + +     
Sbjct: 248 QFEGNAYSWDTQSNGIAKYNYPKLEPQHLDYILLDRDHAQPSSWHNNVHKVKSPEWSVKS 307

Query: 289 GKR------LSDHCPISI 300
             +       SDH P+S 
Sbjct: 308 WGKTYKYNDYSDHYPLSA 325


>gi|309782573|ref|ZP_07677296.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA]
 gi|308918664|gb|EFP64338.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA]
          Length = 269

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 88/304 (28%), Gaps = 63/304 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82
           +R+ +WN+N+L              R       L +   +    D++ LQE+   +    
Sbjct: 1   MRVATWNVNSL------------KVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYP 48

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +   +             ++   +    +  +A+  +   V +    +            
Sbjct: 49  LAELDA----------AGYASLFTGQKTYNGVAILSRKASVPEGRDVVKNIPGFTDDQQR 98

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V    +++G  + V+  ++ +   LDS +  Y        +  + L+ W+  +  + 
Sbjct: 99  --IVAATYDVDGGPVRVISAYIPNGQALDSDKFVYK------LRWLEALQAWLASEMAAN 150

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GDFN                           ++ +     +  F   +      
Sbjct: 151 PRLMLLGDFNIAPEDRDVHDPKKWEGQNLVSPEERAAFRAMQAAGLVDAFRMFEQED-KL 209

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++     K              D +    ++ SDH P+
Sbjct: 210 FSWWDYRMFGFKRNAGLRIDHIMLSPELAKLCESCHI-------DRVPRTWEQPSDHTPV 262

Query: 299 SIDY 302
               
Sbjct: 263 VAAL 266


>gi|312961749|ref|ZP_07776247.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
 gi|311284008|gb|EFQ62591.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
          Length = 270

 Score =  100 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 83/313 (26%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVHDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+  +   +      L   +D+      R
Sbjct: 41  ------QFPLAEVQALGYHVYYHGQKGHYGVALLSRQEALSVHKGFLGDEEDA-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     + +G  + V++       F       +        +  + L+  +  +  + 
Sbjct: 90  RFIWGTFADEHGNPVTVMN-----GYFPQGESRDHPTKFPAKQRFYEDLQHLLESQFSND 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
              V+ GD N                        ++L    ++   +     +  F    
Sbjct: 145 QALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSFLPEEREWMARLKNWGLVDSFRHLN 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +        +            D      +
Sbjct: 205 PDVTDRFSWFDYRSRGFEDEPKRGLRIDVIMASTGLVHRVKDAGV-------DYDLRGLE 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI ++  
Sbjct: 258 KPSDHAPIWLELS 270


>gi|313207216|ref|YP_004046393.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
 gi|312446532|gb|ADQ82887.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
 gi|315022982|gb|EFT36003.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer
           RA-YM]
 gi|325335338|gb|ADZ11612.1| Metal-dependent hydrolase [Riemerella anatipestifer RA-GD]
          Length = 286

 Score =  100 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 104/308 (33%), Gaps = 39/308 (12%)

Query: 2   IRKYV--LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           ++  +  L L + L+  +   +Q ++L+++NI   +  +G+++W+N +  T         
Sbjct: 1   MKTIITNLFLAWVLLFSSFYSSQNLKLMTFNIRYDNPDDGLNVWRNRILNTK-------N 53

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             +    DI+  QE+     +       ++  +       N  +             + +
Sbjct: 54  LLEFYIPDIIGFQEVLPNQYLDLKTILPSYNSYSLGRDSENQGEACPL------FFNKNR 107

Query: 120 NVRVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
              +   ++ L    +    ++    NR    ++++ N  K  +   +L           
Sbjct: 108 FELLDSGTFWLSPTPNKISKAWGANLNRICSWVMLKDNISKSTLKIYNLHF--------- 158

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               S          ++++I + +E  +  ++ GDFN   +           +    +L 
Sbjct: 159 -DHESELSRKNSLALIQEYINKDREQNIYTLVMGDFNTTFSNQELLQQVLPPLAEASTLA 217

Query: 236 RFPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +     +    A  K +     IDY  + ++            + Y     +  G+   D
Sbjct: 218 KKTLLNNGTFQAFGKKVGQSPRIDYIFVPKDT---------EVLQYQILSNQFYGQYPYD 268

Query: 295 HCPISIDY 302
           H P+  + 
Sbjct: 269 HFPVLTEI 276


>gi|289673873|ref|ZP_06494763.1| exonuclease III [Pseudomonas syringae pv. syringae FF5]
          Length = 270

 Score =  100 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 82/314 (26%), Gaps = 78/314 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++VS+NIN L                 +    L         D++ LQE  +       
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + + +                 H  +A+  +N  +        G +     + 
Sbjct: 45  AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHK----GFEGDDEESQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R       + NG+ + +++       F       +        +  + L+  +  +  +
Sbjct: 89  KRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGQFRN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
             P ++ GD N                        ++L    ++ + +     +  F   
Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHL 203

Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                +       +             ID  +        + +          D      
Sbjct: 204 YPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKEAGV-------DYDLRAM 256

Query: 290 KRLSDHCPISIDYD 303
           ++ SDH PI ++  
Sbjct: 257 EKPSDHAPIWLELS 270


>gi|304386652|ref|ZP_07368935.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091]
 gi|304339271|gb|EFM05348.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091]
          Length = 256

 Score =  100 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++     + L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDV-------RVDLETRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|170736479|ref|YP_001777739.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
 gi|169818667|gb|ACA93249.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
          Length = 604

 Score =  100 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 88/316 (27%), Gaps = 48/316 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+       G+    +                   +    K +DAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +      +   + R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 406

Query: 135 DSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185
                  NR+ +     +   N + + V   HLKS    D+  +               +
Sbjct: 407 TLAIDDKNRQPLAQSFRLINGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A  + DW+            ++ GDFN             +T++         +   +
Sbjct: 467 RAAAKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPI-----RTLESRGYRNLVARWIGA 521

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------- 288
              +         +D+ +        +       I  +E                     
Sbjct: 522 NAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYA 581

Query: 289 --GKRLSDHCPISIDY 302
               R SDH P+ ID 
Sbjct: 582 ADAYRSSDHDPVLIDI 597


>gi|107027090|ref|YP_624601.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|116691517|ref|YP_837050.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
 gi|105896464|gb|ABF79628.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|116649517|gb|ABK10157.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
          Length = 604

 Score =  100 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 88/316 (27%), Gaps = 48/316 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+       G+    +                   +    K +DAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +      +   + R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 406

Query: 135 DSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185
                  NR+ +     +   N + + V   HLKS    D+  +               +
Sbjct: 407 TLAIDDKNRQPLAQSFRLVNGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A  + DW+            ++ GDFN             +T++         +   +
Sbjct: 467 RAAAKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPI-----RTLESRGYRNLVARWIGA 521

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------- 288
              +         +D+ +        +       I  +E                     
Sbjct: 522 NAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYA 581

Query: 289 --GKRLSDHCPISIDY 302
               R SDH P+ ID 
Sbjct: 582 ADAYRSSDHDPVLIDI 597


>gi|227819964|ref|YP_002823935.1| endonuclease/exonuclease/phosphatase family protein [Sinorhizobium
           fredii NGR234]
 gi|36958668|gb|AAQ87136.1| Dioxygenase [Sinorhizobium fredii NGR234]
 gi|227338963|gb|ACP23182.1| putative Endonuclease/Exonuclease/phosphatase family protein
           [Sinorhizobium fredii NGR234]
          Length = 264

 Score =  100 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 79/285 (27%), Gaps = 49/285 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +R +++N+++    +              D   +         DI+ LQE+    A 
Sbjct: 2   PRPLRFLTYNVHSCFGTDR-----------KLDPARIAAVIGECRPDIIALQEVDVGRAR 50

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +    +      +       H       D     AV       L ++  L  +       
Sbjct: 51  SGGIDQAHMIATHLNMAAHFHP-ALHLKDERYGDAVLTALPMRLVKADVLPSSG------ 103

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQK 198
             R A+ + +++   ++ V+  HL                     +QA  L    W+   
Sbjct: 104 EPRGALWVEIDLADVRLQVIVTHLGLRGS-------------ERVRQATTLLGPGWLGGI 150

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            +     ++AGD N  I            +          + K        +    + +D
Sbjct: 151 GQGDSRVILAGDLNA-IARSAAYKLLAAHLKDAQL-----QLKAKPRPTFPSRLPLLRLD 204

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +               +        +  +  SDH PI  + +
Sbjct: 205 HVFVGDGI----------NVGDCTVHSSALARVASDHLPILAELE 239


>gi|34498730|ref|NP_902945.1| sphingomyelinase/beta-hemolysin [Chromobacterium violaceum ATCC
           12472]
 gi|34104581|gb|AAQ60939.1| probable sphingomyelinase/beta-hemolysin [Chromobacterium violaceum
           ATCC 12472]
          Length = 510

 Score =  100 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 83/326 (25%), Gaps = 36/326 (11%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           M     L      +P  +  A    ++L +WN   L      +L+ N  +    +     
Sbjct: 1   MKAWRFLLCAALSLPAASHAADPEDLKLATWNAMLLP----QALYPNYGQMRRVELMAAA 56

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY-------STERLINHSKRDSNNDIH 111
              +    D++  QE+    A  K+         Y       + +        +      
Sbjct: 57  PILQAQ--DVLVFQELQDNAASDKLLALLKPRFPYQTPVIGRAQQGWDGTEGWNGMKPED 114

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             +A+  +   V ++ Y       S+     +      + +NG+   V+  HL+S    +
Sbjct: 115 GGVAIASRWPIVEKRQYLFQTPGCSWDGQALKGFAYARIAVNGQFYHVIGTHLQS----E 170

Query: 172 SLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                      +   Q + +  W+  +        ++AGD N               +  
Sbjct: 171 DSGCANHADIGVRQAQLREIAAWVQSRHLPVEETVIVAGDMNIDRYKSAEYRAMLDILQA 230

Query: 231 NDS--------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL--------IQES 274
            +                        +       +DY +  +   +              
Sbjct: 231 GEPRYAGMPHSFDTAGNGIALERYGARGGDAPEYLDYILTLKGHRQPAAWHNQALDAPSP 290

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISI 300
                             SDH P+  
Sbjct: 291 QWTAQSAVAKQTYAYADFSDHYPVQA 316


>gi|15676313|ref|NP_273448.1| exodeoxyribonuclease III [Neisseria meningitidis MC58]
 gi|134104765|pdb|2JC4|A Chain A, 3'-5' Exonuclease (Nexo) From Neisseria Meningitidis
 gi|7225621|gb|AAF40839.1| exodeoxyribonuclease III [Neisseria meningitidis MC58]
 gi|316984902|gb|EFV63858.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76]
 gi|325134978|gb|EGC57610.1| exodeoxyribonuclease III [Neisseria meningitidis M13399]
 gi|325140915|gb|EGC63422.1| exodeoxyribonuclease III [Neisseria meningitidis CU385]
 gi|325199589|gb|ADY95044.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76]
          Length = 256

 Score =  100 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++V              +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHF-----GLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATVS----GVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|301307705|ref|ZP_07213662.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300834379|gb|EFK64992.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 280

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 91/316 (28%), Gaps = 49/316 (15%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +R  ++  +     C     Q+   + + S+N+   +E +    W +             
Sbjct: 1   MRNLIIVFISLFTFCIGISGQQKCKLNVGSFNLRYDNEGDKDDSWAHRKDMA-------V 53

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                 D D+  +QE   +  V  +    T+            +        H A+  +K
Sbjct: 54  SLVHFHDFDVFGIQEGLIHQ-VKDLVKDGTYTFVGVGRDDGKEAGE------HAAVLFKK 106

Query: 119 KNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171
              ++L      L          +     R      ++  ++GK+ +   +H     F  
Sbjct: 107 DRFKLLDSGNYWLSETQDKPSFGWDAQCRRVCSWAKLKDKVSGKEFYFFSVH-----FDH 161

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TID 229
             +     S  ++    + +            P +  GDFN   +             +D
Sbjct: 162 IGKVARHESALIMLANIKKIA--------GDSPAICVGDFNGTPDSEPIQILKSDGLLLD 213

Query: 230 PNDSLIRFPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
             +     P       N    N   K  IDY  + +N              Y   +    
Sbjct: 214 SREISKTPPYGTVGTTNQFNLNAPMKNRIDYIFVTKN---------IHVNKYGTLNEFQY 264

Query: 289 GKRLSDHCPISIDYDF 304
           G   SDH PI I+ +F
Sbjct: 265 GHYPSDHFPIMIEAEF 280


>gi|331653152|ref|ZP_08354157.1| exodeoxyribonuclease III [Escherichia coli M718]
 gi|331049250|gb|EGI21322.1| exodeoxyribonuclease III [Escherichia coli M718]
          Length = 272

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMADIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  F  
Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|238786156|ref|ZP_04630108.1| Exodeoxyribonuclease III [Yersinia bercovieri ATCC 43970]
 gi|238712925|gb|EEQ04985.1| Exodeoxyribonuclease III [Yersinia bercovieri ATCC 43970]
          Length = 271

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 76/310 (24%), Gaps = 73/310 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ VS+NIN L                 +    L    +    D++ LQE         
Sbjct: 3   TMKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDD 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +FP               +         H  +A+  K   +  +       +D+      
Sbjct: 44  MFP-------LEDVSQHGYHVFYHGQKGHYGVALLTKEKPLAVRRGFPTDEEDA-----Q 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +   +      + V++       F       +        +    L+ ++ Q+  + 
Sbjct: 92  RRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQHSAD 146

Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
              +I GD N                          L     +   +     +  F    
Sbjct: 147 SQLLIMGDINISPTDLDIGIGEENRKRWLRTGKCSFLPEERAWLAQLQNWGLVDTFRAAN 206

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +         I           D      ++ 
Sbjct: 207 PECNDQFSWFDYRSRGFDENRGLRIDLLLASHPLAARCIATGI-------DYEIRGMEKP 259

Query: 293 SDHCPISIDY 302
           SDH P+  ++
Sbjct: 260 SDHAPVWSEF 269


>gi|78048060|ref|YP_364235.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|325927483|ref|ZP_08188725.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
 gi|78036490|emb|CAJ24181.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|325542146|gb|EGD13646.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
          Length = 298

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 94/290 (32%), Gaps = 36/290 (12%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            V  +A+ ++++ LV+ N++   E               +    + +  K L  D++ LQ
Sbjct: 32  AVQSSATASREMTLVTLNLHHDRED------------WPARRAYIARELKRLAPDVIALQ 79

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+        V  +  W            S            A+  +   +      L  
Sbjct: 80  EVIERRG--SVENQAAWLARKLGYDYTFASVDPVGAPKRYGNALLSRRKVLATHQRLLQP 137

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D       R A  L V+++G+ + V   HL         E   +    + ++Q   L 
Sbjct: 138 LDDY------RVAAHLQVDVDGQPVNVYVTHLN--------ERADARGAGIRTRQVADLL 183

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           D+I     +  P VIAGDFN   + L          D   S+ R      S  N +   R
Sbjct: 184 DFIASN-SAQAPVVIAGDFNTAADTLDLQALRKGYGDSYGSVHRNSDATVSTLNMHIFDR 242

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ID+    QN           E  Y      + G+  SDH  + +  
Sbjct: 243 -PARIDHVFFQQNRLLAREARILFEAPY------AEGRWASDHYGVWVRL 285


>gi|220907814|ref|YP_002483125.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425]
 gi|219864425|gb|ACL44764.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425]
          Length = 647

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 83/322 (25%), Gaps = 58/322 (18%)

Query: 21  AQKVRLVSWNINTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           A  + + S+N+  L+        +K +  R T+    +     +   DIV LQE+   + 
Sbjct: 331 AHHLTIASFNVENLNPGAAQSKDFKFTGNRITAIAEAIVSSLGS--PDIVGLQEVQDNSG 388

Query: 80  VAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                                     T+  +     L N        +I  A     + V
Sbjct: 389 PEDDGVVAADQTARLLVAAIAAAGGPTYQ-YIDIPPLNNQEGGQPGGNIRVAFLFNPQRV 447

Query: 122 RVLQQS--------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           +++                        P      + +    R+++        +   V++
Sbjct: 448 QLMSGQAGRGDATTATTVLAGGGLSLSPGRIDPLNPAFRETRKSLVAQFRFREQDFVVIN 507

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKI 215
            H  S      L     P    S      QA  +  ++            ++ GD N   
Sbjct: 508 NHWSSKRGDQPLYGPNQPPDLPSNQQRQTQAAIVHQFVQTLLSQNPATKVIVLGDLNDFG 567

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                     +   P   +    +  +    +     N   +D+ ++          +  
Sbjct: 568 FSPPLETLKGQ---PPLLVNLAEQLPEVERYSYVFQGNAQELDHVLVSSALQPRAQFDIV 624

Query: 276 SEILYNEDDIKSRGKRLSDHCP 297
                          +LSDH P
Sbjct: 625 H-------LNAEFHTQLSDHDP 639


>gi|33863562|ref|NP_895122.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9313]
 gi|33641011|emb|CAE21469.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9313]
          Length = 279

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 87/304 (28%), Gaps = 67/304 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+N                   +    ++ + K+   D++ LQE  +       +V
Sbjct: 3   IATWNVN----------------SIRTRLDQVQAWLKDAQPDLLCLQETKVDDPLFPHEV 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    + + +                 +  +A+  +      +     G     + A   
Sbjct: 47  FEAQGYQVHFH------------GQKAYNGVAIVSRQPLEDVRRG-FTGELPEDAEALQL 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              + ++      I +++ ++ +   L S +  Y        +    L  ++  + +   
Sbjct: 94  GEQKRVISALVNNIRIVNAYVPNGSALKSEKYPYK------LEWLSCLNRYLCAQAKRDE 147

Query: 204 PFVIAGDFNRKINYLGNNDD-------FWKTIDP-------NDSLIRFPKEKDSRCNANK 249
           P  + GDFN  +     +             ++         D L    +  +   N   
Sbjct: 148 PLCLVGDFNIALEARDIHHPELLTGGIMASELEREALLKVLGDRLHDVFRVFEPDANHWS 207

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+  +              +            ++ SDH P+S+
Sbjct: 208 WWDYRSGAWDRDQGWRIDHIYLCDELLSQARSCVIHKH-------LRGHEKPSDHAPVSV 260

Query: 301 DYDF 304
           D ++
Sbjct: 261 DLNW 264


>gi|311745839|ref|ZP_07719624.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
 gi|311302431|gb|EAZ80320.2| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
          Length = 286

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 77/290 (26%), Gaps = 34/290 (11%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S AQ     ++NI   +  +  +LW        +    + +  +    +IV +QE     
Sbjct: 26  SQAQTHNFATFNIRYANNNDVGNLW-------ENRLPEVSKLIQFHQIEIVGIQEGLHDQ 78

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            V  +     +                +    +        +        P   +K  + 
Sbjct: 79  VV-GLSNSLGYSFIGVGRDDGTEKGEYAAILYNQDNFKLLDSGTFWLSPTPEKPSK-GWD 136

Query: 139 RAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            A NR       +   G   ++ +IH          +     S  L+  Q   L      
Sbjct: 137 AALNRICTWGKFQDREGVTFFIFNIHY-----DHIGQQAREESSKLVMNQVAKLN----- 186

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNANKNLR--NK 254
                 P ++ GDFN   +               +  + + P           +      
Sbjct: 187 --PEGAPAIMMGDFNVTPDNPAYTTITSNPAWKDSRLISKIPSYGPKGTFTGFDWERMPD 244

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             ID+  +               I +         K  SDH P+ ++ DF
Sbjct: 245 GIIDHVFV---------YGPIEVIRHGILSDNYGKKYPSDHFPVLVELDF 285


>gi|209549080|ref|YP_002280997.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534836|gb|ACI54771.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 263

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 99/305 (32%), Gaps = 68/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+ D DIV LQE+ +   + + 
Sbjct: 1   MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  K               D  SR    
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKTSPSEVNRGLPGDPLDEQSRF--- 91

Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +E +  +   +I  V  I+L +   +D+ +  Y  +        + L+ +  ++    
Sbjct: 92  --LEAVFTLPDTRILRVCCIYLPNGNPVDTEKYPYKLA------WMERLRSFAAERLAYE 143

Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              V+AGD+N                   +L    + ++ ++            D+    
Sbjct: 144 EMLVLAGDYNVIPEPHDCFDPKVWESDALFLPQTREAFRRLENLGLTDAVRATTDATQFY 203

Query: 248 NKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +            N I ID+ ++   A   +   +  + +          ++ SDH P+ 
Sbjct: 204 SFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPVI 256

Query: 300 IDYDF 304
             +DF
Sbjct: 257 AYFDF 261


>gi|226355795|ref|YP_002785535.1| extracellular nuclease [Deinococcus deserti VCD115]
 gi|226317785|gb|ACO45781.1| putative extracellular nuclease,
           Endonuclease/Exonuclease/phosphatase family [Deinococcus
           deserti VCD115]
          Length = 865

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 90/315 (28%), Gaps = 44/315 (13%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
              +++   N+ N  +         ++    T     +    + L+AD++ L E+ +   
Sbjct: 281 GGTLKVAGANVLNYFTTLGSAGRGASNSTEFTRQKAKIVAELRALNADVITLMEVENNGE 340

Query: 79  -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A+  +          +    +   K  ++  I  AI  R   V  +       G +   
Sbjct: 341 VALDDLVTALNAAAGKTEFASVKTGKVGTD-AIRMAIIYRPDRVETV------GGPQIDT 393

Query: 138 SRAGNRRAVELLVEINGKK--IWVLDIHLKS-FCFLDSLENTYSPSCS--LLSQQAQWLK 192
           +   +R  V       G K    V+  H KS      S +      C   L   QA+ L 
Sbjct: 394 NAVHSRPPVAQTFRDLGGKGIFTVVANHFKSKGSCPASGDVDMGQGCWNLLRVDQAKALL 453

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           ++  + K      ++ GD N             KTI+         +       + +   
Sbjct: 454 EFAGRLKAVDPDVLLMGDLNAYGEEDPI-----KTIEAAGFESLNKRIPAEDRYSYQFNG 508

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------------------- 289
               +D+ +        +   +   I  +E  +                           
Sbjct: 509 EFGYLDHALSSSTLSAQVTGITEWHINSDEPVVLDYNIEFKKHPECTATNCTSPDLYAPT 568

Query: 290 -KRLSDHCPISIDYD 303
             R SDH P+ +   
Sbjct: 569 PYRSSDHDPVLVGLT 583


>gi|154253458|ref|YP_001414282.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1]
 gi|154157408|gb|ABS64625.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1]
          Length = 261

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 92/303 (30%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+N+N                   +  T L  + K  + DIV LQE+   +     
Sbjct: 1   MKIASFNVN----------------SIKARLTNLTDWLKEAEPDIVCLQELKCIDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++   +    +  +A+  K+              D  +R    
Sbjct: 41  ------NFPHGPIEELGYNVAVNGQKTYNGVAILSKHPLEDVSRGLPGNDGDDHARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V  NG  + V  I+L +   +D+ + TY             L D   +      
Sbjct: 92  --IEAVVSANGSVVRVASIYLPNGNPVDTDKFTYK------LGWMDRLIDHARELLSYEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P V+AGD+N        ++      D               N  L    +      +   
Sbjct: 144 PLVLAGDYNVIPTIDDVHNPAAWVNDALFRPETRAKFRELINLGLTDAFRACHREAHRYT 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L          + D      ++ SDH PI +
Sbjct: 204 FWDYQAGAWAKDNGIRIDHLLLSPQAADLLKAS-------DIDRAVRGREKPSDHVPIWV 256

Query: 301 DYD 303
           + D
Sbjct: 257 ELD 259


>gi|325578563|ref|ZP_08148663.1| exodeoxyribonuclease III [Haemophilus parainfluenzae ATCC 33392]
 gi|325159799|gb|EGC71929.1| exodeoxyribonuclease III [Haemophilus parainfluenzae ATCC 33392]
          Length = 267

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 85/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +   +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEDFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     + +F+                 H  +A+  K      +       +D+  R  
Sbjct: 45  TITDNWGYHVFHH------------GQKGHYGVALLTKKEPKAVRRGFPTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V++       F       +        +    L+ ++ Q  + 
Sbjct: 91  ---IIMADLETPFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQRYLEQDHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N                          L    ++++ +        F K 
Sbjct: 143 ANPVLIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFLPEEREWYQRLYDYGLEDTFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ +++    +  +                  ++
Sbjct: 203 NPTVNDKFSWFDYRSKGFDDNRGLRIDHILVNHQLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|332161914|ref|YP_004298491.1| exonuclease III [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318605567|emb|CBY27065.1| exodeoxyribonuclease III [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666144|gb|ADZ42788.1| exonuclease III [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330859743|emb|CBX70078.1| exodeoxyribonuclease III [Yersinia enterocolitica W22703]
          Length = 268

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 79/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +         H  +A+  KN  +  +       +D+      R
Sbjct: 42  FP-------LEEVSQHGYHVFYHGQKGHYGVALLTKNEPLAVRRGFPTDEEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +        +    L+ ++ Q+  +  
Sbjct: 90  RIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLSADA 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                          L     + + +     +  F     
Sbjct: 145 QVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  +      I           D      ++ S
Sbjct: 205 DCNDQFSWFDYRSRGFDENRGLRIDLLLASRPLAARCIATGI-------DYDIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+  ++
Sbjct: 258 DHAPVWSEF 266


>gi|163801984|ref|ZP_02195880.1| putative phospholipase C precursor [Vibrio sp. AND4]
 gi|159174125|gb|EDP58933.1| putative phospholipase C precursor [Vibrio sp. AND4]
          Length = 442

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 86/289 (29%), Gaps = 32/289 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q + L+++NI  L                   Y L+  Y K    D+V LQE+ +    A
Sbjct: 176 QHLNLMTYNIWALPAVASHIDD---------RYELIPSYVKGF--DVVALQEVFADGREA 224

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +        + +     +     + +D    I  R   V   Q  +P   + D  +   
Sbjct: 225 FLRELAKEYPYQTKMLDKD---GFNIHDGGVTIVSRYPIVNQAQYVFPDCSSADCLADK- 280

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +   G+   + + H  S     S             +Q + +   +     S
Sbjct: 281 --GINYAEIIKGGQAYHIFNTHAAS-----SDTEIAREHRQRQFKQMRAMAQSLN--IPS 331

Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDS-LIRFPKEKDSRC------NANKNLRN 253
               V +GDFN   + +  +       +   +     + +                   +
Sbjct: 332 NETVVYSGDFNVNKLKFPDDYQQMIANLSAIEPEYSGYTESTFDPRINNFAGRTFSGDGS 391

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +DY ++          +++ ++  +      +   LSDH P+S   
Sbjct: 392 VEYLDYVMVSNEYGIKSQNDNYVDVPRSTAASIWQHYNLSDHFPVSTVL 440


>gi|317492293|ref|ZP_07950722.1| exodeoxyribonuclease III [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919632|gb|EFV40962.1| exodeoxyribonuclease III [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 269

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 84/309 (27%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L         D++ LQE         +
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIAKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP        +    + +         H  +A+  K   +  +       +D+      R
Sbjct: 42  FP-------LADLEHLGYHIFYHGQKGHYGVALLTKEQPLAVRKGFPTDEEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       ++  Q L++++  ++    
Sbjct: 90  RIIMADIATPTGVLTVIN-----GYFPQGESRDHPIKFPAKTKFYQDLQNYLETEQTPAG 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               ++   +     +  + +   
Sbjct: 145 QVIVMGDVNISPTDSDIGIGEENRKRWLRTGKCSFLPEEREWMDRLKNWGLIDTYRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R +       +           ID  +  Q+  +  I           D      ++ S
Sbjct: 205 ERNDQFSWFDYRSKGFDENRGLRIDLVLASQSLAERCIDTGI-------DYEIRGMEKPS 257

Query: 294 DHCPISIDY 302
           DH PI  D+
Sbjct: 258 DHAPIWADF 266


>gi|297537413|ref|YP_003673182.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301]
 gi|297256760|gb|ADI28605.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301]
          Length = 260

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 92/305 (30%), Gaps = 72/305 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +   +L +WN+N+L+                     +  + ++   D++ LQE    ++ 
Sbjct: 3   SGTFKLATWNVNSLN----------------VRLQHVLDWLRDNPIDVLCLQETKQEDS- 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                       Y+  +   ++   S    +  +A+              +    +    
Sbjct: 46  ---------KFPYTELKEAGYNAIHSGQKTYNGVAILS------THDMTEVEHGIADFED 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G +R +   +      + V+ +++ +   +DS +  Y        +    L  W+  + +
Sbjct: 91  GQKRVISATIN----GVRVVCVYIVNGQAVDSEKYEYK------MRWLTALNTWLAGELK 140

Query: 201 SLVPFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCN 246
                V+ GD+N        +D      + +                L    +  +    
Sbjct: 141 KYPKLVVLGDYNIAPEDRDCHDPAAWLGQILVSPQEREHFQKLLQLGLHDSFRLFEQAEK 200

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           +      ++          ID+ ++        I  +        D    + +R SDH P
Sbjct: 201 SFSWWDYRMMGFRRNFGMRIDHILVSDALKSACIAATI-------DKAPRKLERPSDHTP 253

Query: 298 ISIDY 302
           + ++ 
Sbjct: 254 VILEL 258


>gi|296284849|ref|ZP_06862847.1| hypothetical protein CbatJ_14571 [Citromicrobium bathyomarinum
           JL354]
          Length = 257

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 87/302 (28%), Gaps = 69/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN                   +    L ++ +    D+  LQE+ S +     
Sbjct: 1   MRIATFNING----------------IKARLPRLLEWLEETQPDVACLQEIKSQDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S    I +            +AV  K    +++    L   +S  +    
Sbjct: 41  ------GFPASEFEAIGYQALWHGQKSFNGVAVLAKQGLTMEERQRGLPGDESDDQ---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  L VE++G  + + +++L +       +  Y  +        + L+  +        
Sbjct: 91  -ARYLEVEVDG--VVIANLYLPNGNPHPGPKFDYKLA------WMERLRARMAALWAQEK 141

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GDFN                       + D + + +    +              
Sbjct: 142 PTIVLGDFNVIPQDKDVWSPPAMADDALMQPESRDAYARLLADGWTDAIDTLNPRGGVWT 201

Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + +           ID+ ++       L            D      ++ SDH P+ +
Sbjct: 202 FWDYQRGAWQRDHGFRIDHCLLSPELADRLQAAGV-------DKHARGREKASDHAPVWV 254

Query: 301 DY 302
           + 
Sbjct: 255 EI 256


>gi|294340117|emb|CAZ88488.1| putative exodeoxyribonuclease III [Thiomonas sp. 3As]
          Length = 253

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 81/301 (26%), Gaps = 74/301 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+LS                     +  + +    D++ LQE    +     
Sbjct: 1   MKIATWNVNSLS----------------VRLPQVLDWLQAQSPDVLALQETKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++      +         +  +A+  +      Q              G  
Sbjct: 41  ------RFPHAELLNAGYHSVCLGQPTYNGVALLSRREAAEVQR----------GIPGFE 84

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A   ++      + V+  +  +    DS +  Y        +    L+ W+  + +   
Sbjct: 85  DAQARVIAATFGDLRVIGAYFPNGQAPDSDKFAYK------MRWLDALQAWVAAELQRYA 138

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              + GDFN         D                 +K +     +  F +  D    + 
Sbjct: 139 KVALMGDFNIAPEDRDVFDPVAWAGQIHCTPEERGHFKALLGLGLIDAF-RAFDQPPKSW 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++ +     L            D    + +R SDH P+ 
Sbjct: 198 SWWDYRNLAFRKNQGLRIDHILVSEGLRDSLQSCVI-------DKAPRKNERPSDHAPVI 250

Query: 300 I 300
            
Sbjct: 251 A 251


>gi|251779644|ref|ZP_04822564.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243083959|gb|EES49849.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 258

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 93/291 (31%), Gaps = 46/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+           + +   R      L+       + DI+  QE          
Sbjct: 1   MKVMTFNLRCDF-------FLDFNNRWDERKKLVFDVINKYNCDIIGTQEATKKMFKDIS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA--- 140
               T+ I  +       S           I + KK+  +  +++ L    + + R+   
Sbjct: 54  DNIETFNIIGNPRSKKLFS-------ERNDILISKKHSIIENKTFWLHDNPEKYGRSRWY 106

Query: 141 --GNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT- 196
               R     +VE+ N K+I + + HL                    + + + L ++I  
Sbjct: 107 SMFPRICTTAIVELENSKRIRICNSHLDFLLP------------QARAYELKKLSEFIKK 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK----EKDSRCNANKNLR 252
           ++++  +P +I GDFN   N     +     +     +    K       +     KN  
Sbjct: 155 EQEKEELPLIIMGDFNSNPNSKLIKEFINGDVFNKRLVAVQDKKKELYNKATMGNFKNKE 214

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               IDY  + +          F  I          GK  SDH P+  +  
Sbjct: 215 KGSHIDYIFVSEE---------FEIIDVEIVKYNVNGKYPSDHYPLMAEIS 256


>gi|270262158|ref|ZP_06190430.1| exodeoxyribonuclease III [Serratia odorifera 4Rx13]
 gi|270044034|gb|EFA17126.1| exodeoxyribonuclease III [Serratia odorifera 4Rx13]
          Length = 268

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 80/310 (25%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLSAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +         H  +A+  K+  +  +        D+      R
Sbjct: 42  FP-------LEEVSQHGYHVFYHGQKGHYGVALLTKDEPIAVRRGFPTDDDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       S+  Q L++++ Q+     
Sbjct: 90  RIIMADLATPQGTLTVIN-----GYFPQGESRDHPTKFPAKSRFYQDLQNYLEQQLSVES 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N   +                           ++   +     +  +     
Sbjct: 145 PVLVMGDVNISPSDYDIGIGEESRKRWLRTGKCSFLPEEREWMDRLLNWGLVDTYRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R +       +           ID  +                     D      ++ S
Sbjct: 205 GRNDEFSWFDYRSRGFDENRGLRIDLLLASTPLAARCTATGI-------DYQIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH P+  ++ 
Sbjct: 258 DHAPVWAEFS 267


>gi|207742979|ref|YP_002259371.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609]
 gi|206594376|emb|CAQ61303.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609]
          Length = 269

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 97/303 (32%), Gaps = 61/303 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L  +  +      +    +D T +         D++ LQE+   +    +
Sbjct: 1   MRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELKLPDDRYPL 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +             ++   +    +  +A+  +    + +   ++     F+    R
Sbjct: 50  AELDA----------AGYASLFTGQKTYNGVAILARKA-AMPEGRDVIKNIPGFADEQQR 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V    ++ G  + V+  +  +   LDS +  Y        +    L+DW+  + ++  
Sbjct: 99  -IVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLKTEMDAHP 151

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GDFN   +                       ++ ++    +  F   + +     
Sbjct: 152 RLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFEQAD-KLF 210

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID+ ++     +              D +    ++ SDH P+ 
Sbjct: 211 SWWDYRLFAFKRNAGLRIDHILLSPELAQRCESCHI-------DRVPRGWEQPSDHTPVV 263

Query: 300 IDY 302
              
Sbjct: 264 AAL 266


>gi|254672519|emb|CBA06061.1| exodeoxyribonuclease III [Neisseria meningitidis alpha275]
 gi|254673406|emb|CBA08729.1| exodeoxyribonuclease III [Neisseria meningitidis alpha275]
 gi|308388602|gb|ADO30922.1| exodeoxyribonuclease III [Neisseria meningitidis alpha710]
 gi|325130865|gb|EGC53597.1| exodeoxyribonuclease III [Neisseria meningitidis OX99.30304]
 gi|325136967|gb|EGC59564.1| exodeoxyribonuclease III [Neisseria meningitidis M0579]
 gi|325202788|gb|ADY98242.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240149]
 gi|325208783|gb|ADZ04235.1| exodeoxyribonuclease III [Neisseria meningitidis NZ-05/33]
          Length = 256

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|150008704|ref|YP_001303447.1| hypothetical protein BDI_2094 [Parabacteroides distasonis ATCC
           8503]
 gi|255014502|ref|ZP_05286628.1| hypothetical protein B2_11369 [Bacteroides sp. 2_1_7]
 gi|256841263|ref|ZP_05546770.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|149937128|gb|ABR43825.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|256737106|gb|EEU50433.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 348

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/350 (10%), Positives = 98/350 (28%), Gaps = 59/350 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50
           ++ ++  L+FF  P   + A   +++++N+    +        +           +  R 
Sbjct: 1   MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +            ++ L E+ + + ++ +  +           +        
Sbjct: 60  YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSP---D 116

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLK 165
              I+ A+  ++     L+     +    +      R  + +  + I G  + V   H  
Sbjct: 117 PRGINVALLYQRDQFFYLRHESIPIRFSGNKH-KLTRDILHVYGKIITGDTLDVFVCHFP 175

Query: 166 SFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
           S    +         +   L   +  L              +I GDFN        ++ F
Sbjct: 176 SRYGGEKESEKDRFDAARTLRGSSDSLL-----LIREKPQILIMGDFNDTPQDRSISEIF 230

Query: 225 WKTIDPN----------DSLIRFPKEKDSRC-NANKNLRNKIPIDYFVMDQNAYKF---- 269
                P                F     ++   ++K       +D  +++++        
Sbjct: 231 AAQAFPENTQITDSTSCTYYNLFASPHITQFPGSHKYQGEWSQLDQIIVNRDLITQESSM 290

Query: 270 -LIQESFS----------------EILYNEDDIKSRGKRLSDHCPISIDY 302
            +I ES                     +            SDH P+++D+
Sbjct: 291 HIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLTVDF 340


>gi|121593299|ref|YP_985195.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42]
 gi|222110021|ref|YP_002552285.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY]
 gi|120605379|gb|ABM41119.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42]
 gi|221729465|gb|ACM32285.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY]
          Length = 255

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 86/292 (29%), Gaps = 53/292 (18%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A  +  +R+ ++NI+           +        +   L    + LDADIV LQE+  
Sbjct: 9   PAEHSGILRVATYNIH--------KGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRR 60

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPL 130
            N   +      W      E L                      A+  +   +  Q    
Sbjct: 61  MN-RKEASYFERWPHVPQAEYLAPEGYEAIYRTNAFTRHGEHGNALLTRWPVIGHQH--- 116

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                S  R   R  + + VEI G+++  + +HL                     +Q   
Sbjct: 117 --EDISDHRFEQRGLLHVEVEIQGRRVHAIVVHLGLVPGS-------------RIRQVAQ 161

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L+ +I ++     P V+AGDFN         D   +          F  +   +      
Sbjct: 162 LQRFIAREVPEDAPLVVAGDFN---------DWGLQIKRMLAGFGLFEYDDAPQAFTYPA 212

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +D+  +       L                    R+SDH P+  ++
Sbjct: 213 RLPMVQLDHVYVRG-----LTPLGLQVPRGRI------WWRMSDHLPLIAEF 253


>gi|262382996|ref|ZP_06076133.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295874|gb|EEY83805.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 280

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 91/316 (28%), Gaps = 49/316 (15%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +R  ++  +     C     Q+   + + S+N+   +E +    W +             
Sbjct: 1   MRNLIIVFISLFTFCIGISGQQKCKLNVGSFNLRYDNEGDKDDSWVHRKDMA-------V 53

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                 D D+  +QE   +  V  +    T+            +        H A+  +K
Sbjct: 54  SLVHFHDFDVFGIQEGLIHQ-VKDLVKDGTYTFVGVGRDDGKEAGE------HAAVLFKK 106

Query: 119 KNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171
              ++L      L          +     R      ++  ++GK+ +   +H     F  
Sbjct: 107 DRFKLLDSGNYWLSETQDKPSFGWDAQCRRVCSWAKLKDKVSGKEFYFFSVH-----FDH 161

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TID 229
             +     S  ++    + +            P +  GDFN   +             +D
Sbjct: 162 IGKVARHESALIMLANIKKIA--------GDSPAICVGDFNGTPDSEPIQILKSDGLLLD 213

Query: 230 PNDSLIRFPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
             +     P       N    N   K  IDY  + +N              Y   +    
Sbjct: 214 SREISKTPPYGTVGTTNQFNLNAPMKNRIDYIFVTKN---------IHVNKYGTLNEFQY 264

Query: 289 GKRLSDHCPISIDYDF 304
           G   SDH PI I+ +F
Sbjct: 265 GHYPSDHFPIMIEAEF 280


>gi|307325998|ref|ZP_07605196.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
 gi|306888220|gb|EFN19208.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
          Length = 608

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 80/324 (24%), Gaps = 71/324 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN 78
           A ++ + ++N+  LS +              S +  L           DIV L+E+   N
Sbjct: 302 ADELSIATYNVENLSPKT-----------AQSKFDRLATGLVEHLASPDIVALEEVQDDN 350

Query: 79  AVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                                K     ++        + +        +I  A     + 
Sbjct: 351 GATNDSVVGADATLTKLTDAIKAAGGPSYEW-RQINPVDDQDGGQPGGNIRVAFLYNPER 409

Query: 121 VRVLQ---------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
           V                          + P      +     +R+ +       G+ ++V
Sbjct: 410 VSFTDIPGGDSTTPVTVEKKGGKAALSASPGRIDPANGVWKDSRKPLVGQFSFRGRPVFV 469

Query: 160 LDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNR 213
           +  H  S      L++ + P    S +  + QA+ +  ++      +     V+AGD N 
Sbjct: 470 VANHFNSKGGDQGLDSRFQPPARSSETQRTGQAKTVNTFVKTLLNADPKAAVVVAGDLND 529

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                                    +             N   +D+ +  +         
Sbjct: 530 YQFSP----ALADLTKGGVLTDLVTRLPRDERYGYVYNGNSQVLDHILTSRALR------ 579

Query: 274 SFSEILYNEDDIKSRGKRLSDHCP 297
                            + SDH P
Sbjct: 580 --RADYDIVHINAEFADQSSDHDP 601


>gi|229816298|ref|ZP_04446607.1| hypothetical protein COLINT_03350 [Collinsella intestinalis DSM
           13280]
 gi|229808149|gb|EEP43942.1| hypothetical protein COLINT_03350 [Collinsella intestinalis DSM
           13280]
          Length = 280

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 86/313 (27%), Gaps = 65/313 (20%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + ++ ++L SWN+N L                             LDADI+ LQE     
Sbjct: 4   TASRALKLASWNVNGLRAVLKKDPSF-------------TDIVAELDADILGLQETKLQE 50

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++     +   +S      +S                     ++ +  +L A  +  
Sbjct: 51  GQVEL-DLPGYHQVWSYAERKGYSGTAVFCREE---------PLSVRHADAVLAAGRAAG 100

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWI 195
            + +   +  +    G+   V  +  + F F+D             S         + ++
Sbjct: 101 LSDDELELVAVAATEGR---VCALEFERFWFVDVYTPNAQGELARLSTRMAWDDAYRAFL 157

Query: 196 TQKKES-LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPK 239
              ++    P V  GDFN   N                       +  +        F  
Sbjct: 158 RSLEDETGKPVVTCGDFNVAHNEIDLKNPKSNRGNAGFSDEERAKFGELLDAGYTDTFRA 217

Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              +   A      +           IDYF++       +        ++          
Sbjct: 218 ANPNLEGAYSWWSYRFNARKNNAGWRIDYFLVSDAIADRVRACGIRNDIF---------- 267

Query: 291 RLSDHCPISIDYD 303
             SDHCP++++ +
Sbjct: 268 -GSDHCPVTLEIE 279


>gi|124022407|ref|YP_001016714.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9303]
 gi|123962693|gb|ABM77449.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9303]
          Length = 279

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 89/304 (29%), Gaps = 67/304 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+N                   +    ++ + ++   D++ LQE  +       +V
Sbjct: 3   IATWNVN----------------SIRTRLDQVQAWLQDAQPDLLCLQETKVDDPLFPHEV 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    + + +                 +  +A+  +      +     G     + A   
Sbjct: 47  FEAQGYQVHFH------------GQKAYNGVAIVSRQPLEDVRRG-FTGELPEDAEALQL 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              + ++      I ++++++ +   L S +  Y        +    L  +++ + +   
Sbjct: 94  GEQKRVISALVNNIRIVNVYVPNGSALKSEKYPYK------LEWLSCLNRYLSAQAKRDE 147

Query: 204 PFVIAGDFNRKINYLGNNDD-------FWKTIDP-------NDSLIRFPKEKDSRCNANK 249
           P  + GDFN  +     +             ++         D L    +  +   N   
Sbjct: 148 PLCLVGDFNIALEARDIHHPERLTGGIMASELEREALLKVLGDRLHDVFRVFEPDANHWS 207

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+  +              +            ++ SDH P+++
Sbjct: 208 WWDYRSGAWDRDQGWRIDHIYLCDELLSQARSCVIHKH-------LRGHEKPSDHAPVTV 260

Query: 301 DYDF 304
           D ++
Sbjct: 261 DLNW 264


>gi|115524629|ref|YP_781540.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisA53]
 gi|115518576|gb|ABJ06560.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisA53]
          Length = 263

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 69/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  +  +   DIV LQE+   +     
Sbjct: 1   MRIATWNVN----------------SVRQRLDHLLTWLNDCSPDIVCLQEIKCVDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K+             +D  +R    
Sbjct: 42  -------FPREPIEALGYNVVTHGQKTFNGVALLSKHPLDEATPRLAGDEEDVHARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V +    + V  ++L +   +D+ +  Y        +  Q L D+  ++  +  
Sbjct: 92  --LEGVVSLKHGVVRVACLYLPNGNPVDTEKYPYK------LKWMQRLFDYTKERLRTEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGDFN         +                 ++ +             D+     
Sbjct: 144 PLILAGDFNVIPAPADVYNALAWVDDALFKPQTRESFQALLGLGLTDALRASTDA-AGQY 202

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L            D      ++ SDH P+ 
Sbjct: 203 TFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGVGI-------DRHVRSWEKPSDHVPVW 255

Query: 300 IDYD 303
            D+D
Sbjct: 256 ADFD 259


>gi|331673295|ref|ZP_08374063.1| exodeoxyribonuclease III [Escherichia coli TA280]
 gi|331069493|gb|EGI40880.1| exodeoxyribonuclease III [Escherichia coli TA280]
          Length = 272

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPITVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSTLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  F  
Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|253989463|ref|YP_003040819.1| exonuclease III [Photorhabdus asymbiotica subsp. asymbiotica ATCC
           43949]
 gi|253780913|emb|CAQ84075.1| exodeoxyribonuclease iii (exonuclease iii) (exo iii) (ap
           endonucleas vi) [Photorhabdus asymbiotica]
          Length = 268

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 78/311 (25%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L    +    D++ LQE   ++ +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLAAIVELHQPDVIGLQETKVHDEL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  +   +          +DS      R
Sbjct: 42  -------FPLEEVNKLGYHVFYYGQKAHYGVALLTRQAPIAVHRGFPGDDEDS-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E     + V++       F       +        +  Q L+ ++ Q      
Sbjct: 90  RIIMADLETPHGLLTVIN-----GYFPQGESRDHPVKFPAKEKFYQDLQSYLEQNLSPQS 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
             +I GD N                               D   + +     +  F    
Sbjct: 145 QVLIMGDMNISPTDLDIGIGDNNQKRWLKTGKCSFLPEERDWMDR-LKDWGLVDTFRHLN 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID     +   +  I           D      ++ 
Sbjct: 204 PECNDQFSWFDYRSKGFDDNRGLRIDLLFASKPLAERCIATGI-------DYKIREMEKP 256

Query: 293 SDHCPISIDYD 303
           SDH P+  +++
Sbjct: 257 SDHAPVWAEFE 267


>gi|254249188|ref|ZP_04942508.1| hypothetical protein BCPG_04048 [Burkholderia cenocepacia PC184]
 gi|124875689|gb|EAY65679.1| hypothetical protein BCPG_04048 [Burkholderia cenocepacia PC184]
          Length = 604

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 88/316 (27%), Gaps = 48/316 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT--------TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+       G+    +                   +    K +DAD++ L E+ 
Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +      +   + R   + I  A+    + V       P+  A 
Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 406

Query: 135 DSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLS 185
                  NR+ +     +   N + + V   HLKS    D+  +               +
Sbjct: 407 TLAIDDKNRQPLAQSFRLINGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNPTRT 466

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A  + DW+            ++ GDFN             +T++         +   +
Sbjct: 467 RAATKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPI-----RTLESRGYSNLVARWIGA 521

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------- 288
              +         +D+ +        +       I  +E                     
Sbjct: 522 NAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYA 581

Query: 289 --GKRLSDHCPISIDY 302
               R SDH P+ ID 
Sbjct: 582 ADAYRSSDHDPVLIDI 597


>gi|108756804|ref|YP_634791.1| putative lipoprotein [Myxococcus xanthus DK 1622]
 gi|108460684|gb|ABF85869.1| putative lipoprotein [Myxococcus xanthus DK 1622]
          Length = 686

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 32/295 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + +WNI    +       +                  +   D   L E+ S     +
Sbjct: 226 PLSVGNWNIEWFGDPLNGPNDELLQLTNAQ------AVIADAGVDFWGLAEIVSTAQFNE 279

Query: 83  V-FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +      +  F + +     S     S N+    +  +   V+VL+    L   +     
Sbjct: 280 LKARLPGYDGFLADDSSRVSSGTSDYSANEQKVGVLFKSDVVQVLRADVVLGNHE---YD 336

Query: 140 AGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            G R  + + + I   G  + V  + +    F    E     S S       W+KD++  
Sbjct: 337 FGGRPPLRVDLRIQRGGASVDVTALVIHMKAFAGPDEYARRLSASG------WIKDYVDL 390

Query: 198 KKESLVPFVIAGDFNRK--------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +  +    V+ GD+N           +     D  ++    + +  RF  +  S      
Sbjct: 391 RLPTQRAMVV-GDWNDDVDVSIATNPSTGVKYDTPYRNFVSDSANYRFTTQALSEAGIGS 449

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +     ID+ ++    +   +  S   I  +    +      SDH PI   ++F
Sbjct: 450 TVSRSTFIDHQLVTNELWASYVPNSTQVIRPSITGYRDNT---SDHYPIISRFNF 501


>gi|217969785|ref|YP_002355019.1| endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T]
 gi|217507112|gb|ACK54123.1| Endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T]
          Length = 301

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 77/311 (24%), Gaps = 55/311 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEM-GSYNAVA 81
           +RL+SWNI      +G             D    R+  +     D++ LQE+  ++  +A
Sbjct: 12  IRLLSWNIQWGRGADG-----------RVDLARTREAIRAAGPLDLICLQEVASNFPGLA 60

Query: 82  KVFPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               ++    F                              +  +        + L    
Sbjct: 61  GGAREDEPAFFAEACADFEPVFGAGMDVPDGDGGRARFGNLLLSRLPVGQVFRHLLPSPA 120

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-------ENTYSPSCSLLSQQ 187
           D    A  R  VE +VE     + V+  HL+ +                   +       
Sbjct: 121 DPACPAMQRVCVEAVVEAPWGPLRVMSTHLEYYSARQRRAQVEALRALQAQAADLARLPA 180

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN- 246
           A    +     +      V+ GDFN +           + +  ++      +        
Sbjct: 181 AGKESNPAFAARPRPASAVLCGDFNCEPGSA-EYLALQRPLPASELAPDAERPHWVDAWA 239

Query: 247 ---------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                            +        D+F +  +    +                     
Sbjct: 240 VAHGARAHAPSVGLHGAEWPDRSYCCDFFFVTADLAPRVRAVEVL-----------ADTA 288

Query: 292 LSDHCPISIDY 302
            SDH P+ ++ 
Sbjct: 289 ASDHQPVVLEL 299


>gi|301156424|emb|CBW15895.1| exonuclease III [Haemophilus parainfluenzae T3T1]
          Length = 267

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +   +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKYQPDVIGLQEIKVADEDFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     + +F+                 H  +A+  K      +       +D+  R  
Sbjct: 45  TITENLGYHVFHH------------GQKGHYGVALLTKQEPKAVRRGFPTDNEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V++       F       +        +    L+ ++ Q  + 
Sbjct: 91  ---IIMADLETPFGLLTVIN-----GYFPQGESRAHETKFPAKEKFYADLQRYLEQDHDK 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N   +                      L    ++++ +        F K 
Sbjct: 143 ANPVLIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEEREWYQRLYDYGLEDTFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ ++++   +  +                  ++
Sbjct: 203 NPTVNDKFSWFDYRSKGFDDNRGLRIDHILVNRQLAERCVDVGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|32472920|ref|NP_865914.1| hypothetical protein RB4127 [Rhodopirellula baltica SH 1]
 gi|32444157|emb|CAD73600.1| probable secreted protein [Rhodopirellula baltica SH 1]
          Length = 279

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 92/309 (29%), Gaps = 54/309 (17%)

Query: 1   MIRK----YVLALVFFLVPCTASVAQKV--RLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M++     ++  LV F        A+ V  R++ +NI+     +              D 
Sbjct: 16  MMKGCGLVWLAGLVMFFGTGVLRAAEPVQVRVLCYNIHHGEGLDR-----------KLDL 64

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             + +  ++++ D+V LQE+    + +    +       +   +            H   
Sbjct: 65  ERIAKVIQSVEPDLVTLQEVDQNASRSGSVDQPAELARLTGMLVAF-GPNIPLQGGHYGN 123

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           AV  K      ++  L      F     R  +   + I+G+   +L +            
Sbjct: 124 AVLSKYPIANHRNELLPN----FDNGEQRGVLSAELTISGRNQPLLLLATHL-------- 171

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                        A+ +   ++  +    P ++AGD N  +N              ++  
Sbjct: 172 -DSRRDDRERLASAKAINQIVS--ESPRRPALLAGDMNDVLNSP----------TLDELE 218

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             + +  +           +  ID+ +   +    LI+    +               SD
Sbjct: 219 TMWTRVNEQVMPTTPVANPRRQIDFILFRPSNSWKLIEVKVLDEAV-----------ASD 267

Query: 295 HCPISIDYD 303
           H PI    +
Sbjct: 268 HRPIFAVLE 276


>gi|89069565|ref|ZP_01156909.1| extracellular nuclease [Oceanicola granulosus HTCC2516]
 gi|89044900|gb|EAR50990.1| extracellular nuclease [Oceanicola granulosus HTCC2516]
          Length = 1049

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 94/341 (27%), Gaps = 53/341 (15%)

Query: 16  CTASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDA 66
             A V   V++ S+N+        +G S       R            + +      LDA
Sbjct: 535 APADVGGDVKVASFNVLNYFTTLDDGSSTVNGQDPRGANSEAELARQTSKIVAALDALDA 594

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V L E+ + +  A                    +     + I  A     + +++   
Sbjct: 595 DVVGLIEIENDDGAATDALVAALNAVSDRTYAAVDTGVIGTDAIKVAFIYDTETMKIADG 654

Query: 127 SYPLLGAKDSF-----SRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENT--- 176
           +   +   D+F     +   NR A+ +  E    G++   ++ HLKS       +     
Sbjct: 655 TSAAILDTDAFVAPLETGPKNRPALAVTFEEKATGEQFTAVNNHLKSKGSPVDGDPNLDD 714

Query: 177 -YSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNND----DFWKTID 229
                       A  L  W+       S    +I GD N        ++           
Sbjct: 715 GQGNGALTRKMAADELVKWLATNPTGTSDADQLILGDLNAYAKEDPIDEIKAGADDMIGT 774

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +D              + +       +DY + +Q   + +   +   I  +E    S  
Sbjct: 775 ADDFTDLATSFLGEEAYSYRFSGQWGTLDYALANQPLLESVTGVTEWHINSDEPSYLSYN 834

Query: 290 KRL---------------------------SDHCPISIDYD 303
             +                           SDH PI +  D
Sbjct: 835 DNVLDPEERSFQVVPDPQEALFDADSPFASSDHDPILVGLD 875


>gi|161870674|ref|YP_001599847.1| exodeoxyribonuclease III [Neisseria meningitidis 053442]
 gi|161596227|gb|ABX73887.1| exodeoxyribonuclease III [Neisseria meningitidis 053442]
 gi|319411070|emb|CBY91471.1| exodeoxyribonuclease III (exonuclease III; EXO III) [Neisseria
           meningitidis WUE 2594]
          Length = 256

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|311747824|ref|ZP_07721609.1| putative endonuclease/exonuclease/phosphatase family protein
           [Algoriphagus sp. PR1]
 gi|126575815|gb|EAZ80125.1| putative endonuclease/exonuclease/phosphatase family protein
           [Algoriphagus sp. PR1]
          Length = 278

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 79/294 (26%), Gaps = 46/294 (15%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
             +         + ++++NI            ++   R TS+   +         D+V +
Sbjct: 29  ITIALAQKDTNTITVLTYNIYHG---------EDPANRGTSNLDEIAALILQYSPDVVAM 79

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ S              +     +L  +S       +  A     + + V  ++    
Sbjct: 80  QEVDSMTTRTAGVYGKKVDLVQELAKLTGYSGYF-AKAMDYAEGGYGEGLLVKGEAIFST 138

Query: 132 GAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      R A     ++ N KKI +   H                       Q + 
Sbjct: 139 QNLPIPHGGEPRAAAWAEFKLSNDKKIAIAGTHFCH------------EFEENRIAQVKE 186

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +     Q   S +P + AGD N + +            D       +     S    +  
Sbjct: 187 ISKVAGQ---SNLPVIWAGDLNLRPDSEAYRSIIGTWKDAGSDPTPY-----SPTFGSLK 238

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 IDY   D +       ES+  +              SDH P+ +   F
Sbjct: 239 DGP--RIDYVWFDPS---KFTLESYQVL----------DVPFSDHYPVLVTLKF 277


>gi|134300632|ref|YP_001114128.1| endonuclease/exonuclease/phosphatase [Desulfotomaculum reducens
           MI-1]
 gi|134053332|gb|ABO51303.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum reducens
           MI-1]
          Length = 244

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 76/280 (27%), Gaps = 56/280 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++++VS+NI      +G                 +     +  A ++ LQE+  +   + 
Sbjct: 3   QIKVVSYNIRHAQGMDGTI-----------HIQRIAASLAHTKAQLIGLQEVDKHMPRSH 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +            +     D     +   A+      +L + Y L        +   
Sbjct: 52  FIHQAKTLGQLLNMHWVYGPNLDWGVAQY-GNAILSYWPVLLYRQYMLPS------KGEQ 104

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +E ++++   K+     HL                    + Q + + + I +     
Sbjct: 105 RGLLEAVLQLKHSKVSFFCTHLGLNQ-------------EERAAQVKEILNIIKKCC--- 148

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P ++ GDFN        +      +                     + + +  IDY  +
Sbjct: 149 YPCILVGDFNDGPTS-KEHRLLTTILKDA-------VGIQGSIKTFPSHKPQEQIDYIFV 200

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                            +      +     SDH P+ I  
Sbjct: 201 SPE--------------WKILSASTYTTLASDHLPVQITL 226


>gi|241663220|ref|YP_002981580.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D]
 gi|240865247|gb|ACS62908.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D]
          Length = 269

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 89/304 (29%), Gaps = 63/304 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82
           +R+ +WN+N+L              R       L +   +    D++ LQE+   +    
Sbjct: 1   MRVATWNVNSL------------KVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYP 48

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +   +             ++   +    +  +A+  +   V +    +            
Sbjct: 49  LAELDA----------AGYTSLFTGQKTYNGVAILSRKASVPEGRDVVKNIPGFTDDQQR 98

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V    +++G  + V+  ++ +   LDS +  Y        +  + L+ W+T +  + 
Sbjct: 99  --IVAATYDVDGGPVRVISAYIPNGQALDSDKFVYK------LRWLEALQAWLTSEMAAN 150

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GDFN                           ++ +     +  F   +      
Sbjct: 151 PRLMLLGDFNIAPEDRDVHDPKKWEGQNLVSPEERAAFRAMQAAGLVDAFRMFEQED-KL 209

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++     K              D +    ++ SDH P+
Sbjct: 210 FSWWDYRMFGFKRNAGLRIDHIMLSPELAKLCESCHI-------DRVPRTWEQPSDHTPV 262

Query: 299 SIDY 302
               
Sbjct: 263 VAAL 266


>gi|300898982|ref|ZP_07117271.1| exodeoxyribonuclease III [Escherichia coli MS 198-1]
 gi|300357379|gb|EFJ73249.1| exodeoxyribonuclease III [Escherichia coli MS 198-1]
          Length = 272

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSTLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++ + +     +  F  
Sbjct: 146 RENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|298375999|ref|ZP_06985955.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298267036|gb|EFI08693.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 348

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/350 (10%), Positives = 98/350 (28%), Gaps = 59/350 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50
           ++ ++  L+FF  P   + A   +++++N+    +        +           +  R 
Sbjct: 1   MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +            ++ L E+ + + ++ +  +           +        
Sbjct: 60  YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSP---D 116

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLK 165
              I+ A+  ++     L+     +    +      R  + +  + I G  + V   H  
Sbjct: 117 PRGINVALLYQRNQFFYLRHESIPIRFSGNKH-KLTRDILHVYGKIITGDTLDVFVCHFP 175

Query: 166 SFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
           S    +         +   L   +  L              +I GDFN        ++ F
Sbjct: 176 SRYGGEKESEKDRFDAARTLRGSSDSLL-----LIREKPQILIMGDFNDTPQDRSISEIF 230

Query: 225 WKTIDPN----------DSLIRFPKEKDSRC-NANKNLRNKIPIDYFVMDQNAYKF---- 269
                P                F     ++   ++K       +D  +++++        
Sbjct: 231 AAQAFPENTQITDSTSCTYYNLFASPHITQFPGSHKYQGEWSQLDQIIVNRDLITQESSM 290

Query: 270 -LIQESFS----------------EILYNEDDIKSRGKRLSDHCPISIDY 302
            +I ES                     +            SDH P+++D+
Sbjct: 291 HIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLTVDF 340


>gi|311279891|ref|YP_003942122.1| exodeoxyribonuclease III [Enterobacter cloacae SCF1]
 gi|308749086|gb|ADO48838.1| exodeoxyribonuclease III [Enterobacter cloacae SCF1]
          Length = 268

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   V  +       +D+      R
Sbjct: 42  FP-------LEDVAKLGYNVFYHGQKGHYGVALLTKATPVSVRRGFPGDGEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +           Q L++++  +  +  
Sbjct: 90  RIIMAEIPSAFGNVTVIN-----GYFPQGESRDHPLKFPAKELFYQNLQNYLNTELNNEN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGDDNRKRWLRTGKCSFLPEEREWMARLLDWGLVDTFRHAHP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  ++          D      ++ S
Sbjct: 205 DTQDKFSWFDYRSKGFDDNRGLRIDLLLASSPLAQRCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|262383588|ref|ZP_06076724.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262294486|gb|EEY82418.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 348

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/350 (10%), Positives = 97/350 (27%), Gaps = 59/350 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50
           ++ ++  L+FF  P   + A   +++++N+    +        +           +  R 
Sbjct: 1   MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +            ++ L E+ + + ++ +  +           +        
Sbjct: 60  YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSP---D 116

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLK 165
              I+ A+  ++     L+     +    +      R  + +  + I G  + V   H  
Sbjct: 117 PRGINVALLYQRDQFFYLRHESIPIRFSGNKH-KLTRDILHVYGKIITGDTLDVFVCHFP 175

Query: 166 SFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
           S    +         +   L   +  L              +I GDFN        ++ F
Sbjct: 176 SRYGGEKESEKDRFDAARTLRGSSDSLL-----LIREKPQILIMGDFNDTPQDRSISEIF 230

Query: 225 WKTIDPND-----------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---- 269
                P +             +           ++K       +D  +++++        
Sbjct: 231 AAQAFPENTQITDSTSCTYYNLFASPYITQFPGSHKYQGEWSQLDQIIVNRDLITQESSM 290

Query: 270 -LIQESFS----------------EILYNEDDIKSRGKRLSDHCPISIDY 302
            +I ES                     +            SDH P+++D+
Sbjct: 291 HIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLTVDF 340


>gi|326789162|ref|YP_004306983.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
 gi|326539926|gb|ADZ81785.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
          Length = 257

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 87/291 (29%), Gaps = 46/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+             +   R      ++ +  K  D D+V LQE+     +   
Sbjct: 1   MKVMSFNVR-------ADSILDVRNRWRHRSEIVYEVIKKYDCDVVGLQEVTDRMYMDLN 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-----FS 138
              + + I           +     +    + V++    + ++++ L           + 
Sbjct: 54  KAIDGYYII-------GKGRTKRYFNERNNLLVKEDYNLLEEETFWLSKTPSKTGSSVWY 106

Query: 139 RAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-T 196
               R     +++  N  KI + + HL                 S      + + +++  
Sbjct: 107 SMFPRICTTAVIQLANNLKIRIYNTHLDCLLP------------SAREYGLKKIGEYVGE 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANKNLR 252
             ++  +P ++ GDFN              +      +           ++     K   
Sbjct: 155 CYQKEKLPCILMGDFNAGPQSKLIQQFSQGSYSDKRFIAVQDVRKEIYNEATMGHFKGKT 214

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + IDY  + +          F          +   K  SDH PI  + +
Sbjct: 215 RGLHIDYIFVSEE---------FEIKDVEIIKYQKNNKYPSDHYPILAEIN 256


>gi|189461907|ref|ZP_03010692.1| hypothetical protein BACCOP_02573 [Bacteroides coprocola DSM 17136]
 gi|189431301|gb|EDV00286.1| hypothetical protein BACCOP_02573 [Bacteroides coprocola DSM 17136]
          Length = 289

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 80/302 (26%), Gaps = 31/302 (10%)

Query: 8   ALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           +L    + CT      +V   ++NI   +  + ++ W             + Q+ K+ D 
Sbjct: 14  SLSVATLSCTTQQQPTEVTWGTFNIRYDNPGDSLNNW-------QYRKDNVAQFIKSQDI 66

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           DIV +QE+              +                S             +      
Sbjct: 67  DIVGMQEVLHNQLEDLKSRLPEYAEVGVGREDGKTKGEYSPLFYKKDRFEVLDSNTFWLS 126

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            YP       +  A +R A    ++        + ++     F             L+ +
Sbjct: 127 QYPDSVGFIGWDGACSRIATWAKLKDKKTGKIFMAVNTH---FDHVGTEARRKGALLIIE 183

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245
           + + +            P V+ GDFN                   D+     + +     
Sbjct: 184 KIKEIV--------GDQPAVLTGDFNVTDQSEAYETITTNEFVLKDAYKEAAQREGVDYT 235

Query: 246 ---NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     +   ID+  +              E  Y   + +  G+ LSDH P  +  
Sbjct: 236 FHDFGRIPADSCDQIDFIFVTPQIKV--------ESSYIPQEAEEAGQFLSDHNPEVVHL 287

Query: 303 DF 304
            F
Sbjct: 288 SF 289


>gi|24373409|ref|NP_717452.1| extracellular nuclease, putative [Shewanella oneidensis MR-1]
 gi|24347681|gb|AAN54896.1|AE015627_14 extracellular nuclease, putative [Shewanella oneidensis MR-1]
          Length = 948

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/337 (12%), Positives = 92/337 (27%), Gaps = 56/337 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADI 68
               +    +++ S+N+      +G      + +            T +      + AD+
Sbjct: 451 SPVLAEGGNLKVASFNVLNYFNGDGQGSGFPTARGANTLSEFERQKTKIISAMVGIGADV 510

Query: 69  VFLQEMGSYNA------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
             L E+ +               +     +N +      +   N+      + I   +  
Sbjct: 511 FGLMEIENDGFGANSAIADLVAGLNTAVGENRYAYVI-PKINGNNLSAIGTDAITVGLIY 569

Query: 117 RKKNV-------RVLQQSYPLL-GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK--- 165
           R   V        +   + PL    +  F    NR  +     +NG +  ++        
Sbjct: 570 RSDKVSPQGDARILSSTNSPLDETGQPLFDDGKNRPMLTQAFVLNGSEEALVVAVNHLKS 629

Query: 166 --SFCFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
             S C  D   N    +C+   ++ A     WI  +       ++ GD N          
Sbjct: 630 KGSECAGDPDVNDGQGNCNITRTRAATAAGQWIAAQYPE-QGVLLIGDLNAYAKEDP--- 685

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                +        F K + +   +         +D+ + +      ++  +   I  +E
Sbjct: 686 --LTALANTGFSELFAKLEKANAYSYVFSGESGQLDHALANAALVDKVVDVTEWHINTDE 743

Query: 283 DDIKSRG-----------------KRLSDHCPISIDY 302
             +                      R SDH P+ I  
Sbjct: 744 PRVLDYNEEFKTPTQVQDLYASDAYRSSDHDPVVISL 780


>gi|33596079|ref|NP_883722.1| putative exodeoxyribonuclease III [Bordetella parapertussis 12822]
 gi|33601475|ref|NP_889035.1| putative exodeoxyribonuclease III [Bordetella bronchiseptica RB50]
 gi|33573082|emb|CAE36724.1| putative exodeoxyribonuclease III [Bordetella parapertussis]
 gi|33575911|emb|CAE32990.1| putative exodeoxyribonuclease III [Bordetella bronchiseptica RB50]
          Length = 260

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 82/305 (26%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L+                     +  +      D + +QE+   +     
Sbjct: 1   MKLATWNVNSLN----------------VRLPQVLDWLAANPVDALCIQELKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    +    +  +A+  +        + L+     +     R
Sbjct: 41  ------KFPLDAFTEAGYHAAWAGQKTYNGVAIISREP-----GFALVRNNPRYEDPQQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + +      + V+  +  +   +DS +  Y  +          L+DW+ ++  +  
Sbjct: 90  -ILAVTLPSPAGDVRVICAYCPNGQSVDSDKYVYKLA------WFDGLRDWLEEEMRTYP 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              I GD+N                           ++ +     L    +  +    + 
Sbjct: 143 RLAILGDYNVAPADADVHNPEKWEGQVLVSEPERAAFRALLDLG-LTDSFRLFEQPEKSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++        +           D      ++ SDH P+ 
Sbjct: 202 SWWDYRQFAFRRNAGLRIDHVLLSDALKPHCVACVI-------DKAPRANEQPSDHAPVI 254

Query: 300 IDYDF 304
               F
Sbjct: 255 ATLAF 259


>gi|297569596|ref|YP_003690940.1| Endonuclease/exonuclease/phosphatase [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925511|gb|ADH86321.1| Endonuclease/exonuclease/phosphatase [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 248

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 76/284 (26%), Gaps = 42/284 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+NI+     + +                + +  K+ + D++ LQE+      ++ 
Sbjct: 3   LRVMSYNIHRAIGVDRLFRP-----------ERIARIIKHHEPDLLLLQEVDVGVPRSRN 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                                 +    H   A   +   V +++  L            R
Sbjct: 52  LDLAEELAGLCGYPHRALGLNVALTKGHYGNATLSRFPIVAERNIDLTLPGH-----KAR 106

Query: 144 RAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +   +EI   NGK   +   +L      +                A            
Sbjct: 107 GCLYTALEIPESNGKSRPLAVFNLHLGLSFNERPRQVGNLVKTPEFAA----------LA 156

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++ GDFN     L      +  +          ++  S      +      +D  
Sbjct: 157 PDDPCIVGGDFNDWFTRLSP---MFTEVMDFKCASSHQEDFQSPYLTYPSFSPTGGLDKI 213

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +               I+  +       K  SDH P+  D D+
Sbjct: 214 FVRGPFA----------IVKRQRCRMQISKIASDHLPVLADLDW 247


>gi|187735113|ref|YP_001877225.1| Endonuclease/exonuclease/phosphatase [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425165|gb|ACD04444.1| Endonuclease/exonuclease/phosphatase [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 253

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 82/305 (26%), Gaps = 59/305 (19%)

Query: 3   RKYVLALVF---FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           ++++  L       +      A +  L+S+N+   +  +G             DY    +
Sbjct: 5   KRFIFRLCAAAALFLSLFPLQAGECTLMSYNVKNGTGMDG-----------RRDYDRTAR 53

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                  D+  LQE+     +          +   T     ++K    +     + +  +
Sbjct: 54  VITEEKPDVAALQEL-DQGTIRSGGRDTLQELAARTTLTGTYAKAIDYSGGSYGVGILSR 112

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
              +  +  PL G      R   R  +        +  W    HL       +       
Sbjct: 113 EKPLSVKRIPLPG------REEARVLLMAEF----RDYWFCVTHLSLTREDSNASIDMIA 162

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           + +                 +   PF IAGDFN   +           I  +D       
Sbjct: 163 ALA----------------AKCSKPFFIAGDFNLTPDSEPITRMKKYFILLSDPAQ---- 202

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                         K  IDY       Y+    E+F        +  +     SDH P+ 
Sbjct: 203 ------KTFPAGHPKECIDYIW----MYRGKKTEAFHVKERRVIEAPA----ASDHRPVK 248

Query: 300 IDYDF 304
           +   +
Sbjct: 249 VTVSY 253


>gi|310767787|gb|ADP12737.1| hypothetical protein EJP617_30560 [Erwinia sp. Ejp617]
          Length = 303

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L+   +    D++ LQE         +
Sbjct: 36  MKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVHDDM 76

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  K   V  +       +D+      R
Sbjct: 77  FP-------LEEVASLGYHVFCHGQKGHYGVALLCKQQPVAVRRGFAGDNEDA-----QR 124

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +        +  + L+ ++ Q++++  
Sbjct: 125 RIIMADILTPAGPLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLEQQQKADN 179

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
             +I GD N   +                           +     ++         +  
Sbjct: 180 QLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCSFLPEEREWMSTLMNWGLYDTWRTQNA 239

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  +      +           D      ++ 
Sbjct: 240 TVN-DRFSWFDYRSKGFDDNRGLRIDLILASRPLADRCVATGI-------DYDIRAMEKP 291

Query: 293 SDHCPISIDYD 303
           SDH PI  ++ 
Sbjct: 292 SDHAPIWAEFS 302


>gi|198274186|ref|ZP_03206718.1| hypothetical protein BACPLE_00326 [Bacteroides plebeius DSM 17135]
 gi|198272861|gb|EDY97130.1| hypothetical protein BACPLE_00326 [Bacteroides plebeius DSM 17135]
          Length = 289

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 37/306 (12%)

Query: 7   LALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           L+L   +  C +     ++   ++NI   +  + ++ W             +  + K  +
Sbjct: 13  LSLCMTIASCHSPQPTSEITWSTFNIRYDNPYDSLNSWTYRK-------DTVANFIKAQN 65

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            DIV +QE+  +           +                +             N     
Sbjct: 66  LDIVGMQEVLHHQLEDLKARLPEYAEVGVGREDGKTQGEYAPLFYKKDRFELLDNNTFWL 125

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
             YP       +  A  R A    ++        + I+     F             L+ 
Sbjct: 126 SQYPDSVGFIGWDGACTRIATWAKLKDKTNGKIFMAINTH---FDHVGTEARKKGALLII 182

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           ++ + +            P V+ GDFN              +    D+     +++ +  
Sbjct: 183 EKIKEIV--------GDQPAVVTGDFNVSDQSEAYQTITGNSFVLKDAHKTALQQEGA-- 232

Query: 246 NANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +                ID+  +              +  Y  ++ +   K LSDH P 
Sbjct: 233 -SYTFHDFGRIPADSCEKIDFIFVTPQIEV--------QRSYIPEENREAKKFLSDHNPE 283

Query: 299 SIDYDF 304
            +   F
Sbjct: 284 IVHLSF 289


>gi|194289407|ref|YP_002005314.1| exodeoxyribonuclease iii [Cupriavidus taiwanensis LMG 19424]
 gi|193223242|emb|CAQ69247.1| EXODEOXYRIBONUCLEASE III [Cupriavidus taiwanensis LMG 19424]
          Length = 276

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 85/309 (27%), Gaps = 67/309 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSY 77
                +R+ SWN+N+L              R       L +  +     D + LQE+   
Sbjct: 7   PGQGPLRIASWNVNSL------------KVRLPQVLQWLAEQEQAGAPIDALCLQELK-- 52

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                  P + +    +           +    +  +A+  ++   +     ++     F
Sbjct: 53  ------LPDDKYP--LAELENAGFHSIYTGQKTYNGVAILARDAS-MPGPVDVVRNIPGF 103

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             A  R     ++      + ++  +  +   LDS +  Y        Q  + +  W+ +
Sbjct: 104 EDAQQR-----VIAATYGDLRLVCAYFPNGQSLDSDKFAYK------LQWLEAMTAWLRE 152

Query: 198 KKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           +        + GDFN                           +  +        F ++ +
Sbjct: 153 EMARHPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPPERAAFAALLELGLADAF-RKFE 211

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
               A      ++          ID+ ++     +              D +    ++ S
Sbjct: 212 QPEKAFSWWDYRMLAFRRNAGLRIDHILLSPALAEQCTACVI-------DRVPRTWEQPS 264

Query: 294 DHCPISIDY 302
           DH P+    
Sbjct: 265 DHTPVVATL 273


>gi|114328666|ref|YP_745823.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1]
 gi|114316840|gb|ABI62900.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1]
          Length = 275

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 61/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+ +WNIN+L                     LL +    LD D++ LQE         +
Sbjct: 6   VRVATWNINSL----------------RLRLPLLEKVLAELDPDVLCLQE---TKVPDPL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP + +    +      H         +  +A+  +    + ++ P   AK         
Sbjct: 47  FPADLFPGRAAEHHGYAHV-AYRGMKGYNGVAILSRIPFTVDEAAPDWCAKGDCRH---- 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + + +    + + + ++ +    D  +   +P  +      +    +   +     
Sbjct: 102 --MAVSLAVPSGPVALHNFYVPAG--GDEPDPAINPKFAHKLAFVEEATAYFAAQSPFTR 157

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                  ++        +       +        S     
Sbjct: 158 TVLV-GDLNIAPLEHDVWSHKQLLNVVSHTPPETTRMRQWLETGFVDAIRHFVPSDRKHY 216

Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+  +  +    L   +               +R SDH P+
Sbjct: 217 TWWSYRNRDWRASDRGRRLDHVWVSPDLVSSLQGHT-------TLKEARDWERTSDHVPV 269

Query: 299 SIDYD 303
           S+   
Sbjct: 270 SVTLS 274


>gi|218673944|ref|ZP_03523613.1| exodeoxyribonuclease III Xth [Rhizobium etli GR56]
          Length = 263

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 99/306 (32%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+ D DIV LQE+ +   + + 
Sbjct: 1   MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  K             A D  SR    
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKTSPSEVNRGLPGDALDEQSRF--- 91

Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +E +  +   +I  V  I+L +   +D+ +  Y  +        + L+ +  ++    
Sbjct: 92  --LEAVFTLPDTRILRVCCIYLPNGNPVDTEKYPYKLA------WMERLRMFAAERLAYE 143

Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              V+AGD+N                   +L    + ++ ++ N  L    +        
Sbjct: 144 EILVLAGDYNVIPEPHDCFDPKVWESDALFLPQTREAFRRLE-NLGLTDAVRATTDATRL 202

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   +   +  + +          ++ SDH P+
Sbjct: 203 YSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPV 255

Query: 299 SIDYDF 304
              +DF
Sbjct: 256 VAYFDF 261


>gi|66045712|ref|YP_235553.1| exonuclease III [Pseudomonas syringae pv. syringae B728a]
 gi|63256419|gb|AAY37515.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Pseudomonas
           syringae pv. syringae B728a]
 gi|330971266|gb|EGH71332.1| exonuclease III [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 270

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/314 (10%), Positives = 81/314 (25%), Gaps = 78/314 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L         D++ LQE  +       
Sbjct: 1   MKIISFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + + +                 H  +A+  +N  +        G +     + 
Sbjct: 45  AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHK----GFEGDDEESQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R       + NG+ + +++       F       +        +  + L+  +     +
Sbjct: 89  KRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGHFRN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
             P ++ GD N                        ++L    ++ + +     +  F   
Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHL 203

Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                +       +             ID  +        + +          D      
Sbjct: 204 YPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKEAGV-------DYDLRAM 256

Query: 290 KRLSDHCPISIDYD 303
           ++ SDH PI ++  
Sbjct: 257 EKPSDHAPIWLELS 270


>gi|302552172|ref|ZP_07304514.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469790|gb|EFL32883.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 274

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 77/298 (25%), Gaps = 46/298 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80
           +R+V+WN+                    +    +    + L  D+V LQE+      N  
Sbjct: 3   MRIVTWNLWWRFGP------------WQTRQKAILTALRELRPDVVGLQEVWAADGENLA 50

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +  +      ++        +R   +       AV  +   V +   PL    ++   
Sbjct: 51  EWLAGELGLHCAWAPSPAPERWRRRIGDATVDIGNAVLSRWPVVDRDVLPLPAPAETDD- 109

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R A+   +   G  +     H  S     +          +   QA  L  ++ + +
Sbjct: 110 --GRLALYARLAAPGHDVPFFTAHFTSVPHGSA----------VRCGQAAALAGFVARHR 157

Query: 200 ESLV-PFVIAGDFNRKINYLG-------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
                P V+ GD N + +                         +  D          +  
Sbjct: 158 GGTPFPPVVTGDLNARPDSDEVRLLGGRGTAPAVPGQVLLDAWEYADPAAPAATWDAANP 217

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      IDY  +                +    D    G   SDH  +  D D
Sbjct: 218 YVAAPHEPSARIDYVHV---GPPGPGGLGRVRDVRRACDGPVDGVWPSDHAAVVADLD 272


>gi|289549377|ref|YP_003470281.1| beta-hemolysin [Staphylococcus lugdunensis HKU09-01]
 gi|289178909|gb|ADC86154.1| beta-hemolysin [Staphylococcus lugdunensis HKU09-01]
          Length = 328

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 96/299 (32%), Gaps = 31/299 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ + N+  L      +++ N  +   +D      Y +    D+V L E+  + A  
Sbjct: 37  DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQGQ--DVVILNELFDHKASN 90

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133
           ++         Y T  +   ++                  + +  K   V Q+ +     
Sbjct: 91  RLLTNLKSQYPYQTPIVGQGTEGWQKTSGSYRKLKKVSGGVGIVSKWPIVQQEQHIYKNG 150

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             + S  GN+    + +  NGK   ++  HL++    +          ++   Q + +K 
Sbjct: 151 CGADS-VGNKGFAYIKINKNGKYQHIIGTHLQA----EDPVCMKGKDQTIRQSQMEEIKQ 205

Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-----NDSLIRFPKEKDSRCNA 247
           +I  +      P  I GD N                         +   +  + +   N 
Sbjct: 206 FIKDKNIPKDEPVYIGGDLNVIKGSAEYQKMSDNLNVSMPKQYEGNAYSWDTQTNGIANY 265

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPISI 300
           N        +DY ++D++  +     + +  + + +       +       SDH P+S 
Sbjct: 266 NYPKLEPQHLDYILLDRDHAQPSSWHNHTHKVKSPEWSVKSWGKTYRYNDYSDHYPVSA 324


>gi|171057931|ref|YP_001790280.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6]
 gi|170775376|gb|ACB33515.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6]
          Length = 254

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 74/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+LS                     L  +  +   D + LQE    +     
Sbjct: 1   MKLATWNVNSLS----------------VRLPQLLDWLVSAQPDALVLQETKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +         +  +A+  +   V            +      R
Sbjct: 41  ------KFPAAELLAAGYHAVWHGQKTYNGVALLSRTPAVDVVRNI-----PALDDPQAR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + V+  +  +    DS +  Y             L+ W+  +  +  
Sbjct: 90  VIAGTV-----DGVRVIGGYFPNGQAPDSEKFVYK------MGWLTALEAWLQTELAAHT 138

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                 ++ +     +  F +  +    + 
Sbjct: 139 QLVLMGDFNIAPEDRDVYDPVAWAGQIHCTPEERAHFQALVGLGLVDAF-RLFEQPPKSW 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++ +     +            D    + +R SDH P+ 
Sbjct: 198 SWWDYRNLAFRKNQGLRIDHVLVGEALKARVTACQI-------DKAPRKNERPSDHAPVW 250

Query: 300 IDY 302
           ++ 
Sbjct: 251 VEL 253


>gi|33866339|ref|NP_897898.1| exodeoxyribonuclease III [Synechococcus sp. WH 8102]
 gi|33639314|emb|CAE08322.1| exodeoxyribonuclease III [Synechococcus sp. WH 8102]
          Length = 278

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 82/306 (26%), Gaps = 67/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  + +    D++ LQE    + +   
Sbjct: 1   MRIATWNVN----------------SVRTRLEQVLCWLEQTKPDLLCLQETKVDDPL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                                      +  +A+  +      +   +    D  + A   
Sbjct: 42  -------FPMQAFENAGWQVSIHGQKSYNGVALVSREPLEDVRCGFVGELPD-DAEAATL 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++      + VL++++ +   L S +  Y             LK ++  + E   
Sbjct: 94  GEQRRVISGLLDGVRVLNLYVPNGSSLSSEKYPYK------LTWLGCLKRYLDAQAERGE 147

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P  + GDFN  +                      D   + +   + L    +  +     
Sbjct: 148 PLCMVGDFNIALEARDIHDPDRLSGSVMASDAERDALREAL--GNRLQDAFRMFEPDAGH 205

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  + +         S                + SDH P+
Sbjct: 206 WSWWDYRTGAWDRDRGWRIDHIYLCEELMGLARSCSIH-------KQLRGNVQPSDHAPV 258

Query: 299 SIDYDF 304
           S+D D+
Sbjct: 259 SVDLDW 264


>gi|156742734|ref|YP_001432863.1| endonuclease/exonuclease/phosphatase [Roseiflexus castenholzii DSM
           13941]
 gi|156234062|gb|ABU58845.1| Endonuclease/exonuclease/phosphatase [Roseiflexus castenholzii DSM
           13941]
          Length = 1641

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 92/336 (27%), Gaps = 54/336 (16%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLW----KNSVKRTTSDY-------TLLRQYAKNLD 65
             +V   +R+ ++N+           +      +  R   +          L      LD
Sbjct: 518 PPAVGGDLRVAAFNVLNYFNTFSGCTFGVGGPPADCRGAENATEFTRQNAKLIPALLRLD 577

Query: 66  ADIVFLQEMGSY-----NAVAKVFPKNTW------CIFYSTERLINHSKRDSNNDIHTAI 114
           AD++ L E+ +      +A+A++  +           F   +     +     + I  AI
Sbjct: 578 ADVLGLIEIENDGYGPTSALAELVNRLNAATAPGTYAFIDVDAATGQTNALGTDAIKVAI 637

Query: 115 AVRKKNVRVLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
             +   V  + Q+        +   DS  R     A        G+ + V+  H KS   
Sbjct: 638 LYKPAVVTPVGQTAALNTVAFVNGGDSAPRNRPALAQTFRHRATGEDVTVVVNHFKSKGS 697

Query: 170 LDSLENTYSPSCS---LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDF 224
                +    + +   +    AQ L  W+            +I GD N        +   
Sbjct: 698 PCDAPDAGDGAGNCNIVRRNAAQELVAWLAGNPTGTGDNDILILGDLNSYAQEDPID--- 754

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
              +                  +         +DY +   +A   +       I  +E  
Sbjct: 755 --VLRAAGYTDLAQTFIGDEAYSYVFNGQWGYLDYALASPSALAKVSGVVEYHINADEPS 812

Query: 285 IKSRG-----------------KRLSDHCPISIDYD 303
           +                      R SDH PI +  +
Sbjct: 813 VLDYNTNFKSAGQQVSLFATDQYRTSDHDPILVGLN 848


>gi|320089760|pdb|3K55|A Chain A, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089761|pdb|3K55|B Chain B, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089762|pdb|3K55|C Chain C, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089763|pdb|3K55|D Chain D, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089764|pdb|3K55|E Chain E, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089765|pdb|3K55|F Chain F, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089766|pdb|3K55|G Chain G, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089767|pdb|3K55|H Chain H, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089768|pdb|3K55|I Chain I, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089769|pdb|3K55|J Chain J, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089770|pdb|3K55|K Chain K, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089771|pdb|3K55|L Chain L, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089772|pdb|3K55|M Chain M, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089773|pdb|3K55|N Chain N, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089774|pdb|3K55|O Chain O, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
 gi|320089775|pdb|3K55|P Chain P, Structure Of Beta Hairpin Deletion Mutant Of Beta Toxin
           From Staphylococcus Aureus
          Length = 306

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 87/292 (29%), Gaps = 31/292 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS N+  LS      L+ N  +   +D      Y K  + D+V   E     A  K
Sbjct: 29  DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 82

Query: 83  VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T                  S       +A+  K     +  +      
Sbjct: 83  LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 142

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK + V+  H +S    DS          + ++Q + + D+
Sbjct: 143 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 197

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248
           + +          I GD N          D  K ++ ND L                  N
Sbjct: 198 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 256

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                   +DY   D++  +     +         +        SDH PI  
Sbjct: 257 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVT-----EKPKPWNDFSDHYPIKA 303


>gi|226358180|ref|YP_002787919.1| Exodeoxyribonuclease III [Deinococcus deserti VCD115]
 gi|226319823|gb|ACO47817.1| putative Exodeoxyribonuclease III [Deinococcus deserti VCD115]
          Length = 270

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 81/303 (26%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L+                     +  + +    D++ LQE    +     
Sbjct: 1   MKLATWNVNSLN----------------VRLGQVMAWLEAQQPDVLALQETKLPDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +    S    +  +A+  +      Q                R
Sbjct: 41  ------RFPVAELEALGYRAVFSGQKSYNGVALLSRLPLEDVQ------IGIPGLDDEQR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R V   V      + V+ +++ +   +DS + TY        +    ++ W+  +  +  
Sbjct: 89  RVVAATV----GGMRVVCLYVPNGQAVDSPKYTYK------LEWLSAVRAWLQLELMAHP 138

Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
              + GDFN                + +             +  L    +          
Sbjct: 139 RLAVVGDFNVAPEDRDVHSPKRWAGQVLVSEPERQAFRALLDLGLHDAFRLHPQPERVFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+ ++           +        D    R +R SDH P+  
Sbjct: 199 WWNYGRLGFPRNWGLRIDHVLVSGILAAECQSCTV-------DLEPRRHERPSDHAPVVA 251

Query: 301 DYD 303
            + 
Sbjct: 252 TFS 254


>gi|170700263|ref|ZP_02891278.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
 gi|170134847|gb|EDT03160.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
          Length = 599

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 84/320 (26%), Gaps = 48/320 (15%)

Query: 19  SVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVF 70
             A  VR+ S+N+ N  +       + +   R              +    + L AD++ 
Sbjct: 286 PQAD-VRVASFNVFNYFNGDGTGGGFGDPSGRGAKTPAAFARQEAKIVAALRALRADVIG 344

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           L E+ +         +          R ++    R   + I  A+    + V       P
Sbjct: 345 LMEIANNGLGPASAVQRLATRLGDGWRAVDPGTARLGRDAIAVALLYDSRTVE------P 398

Query: 130 LLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSC------ 181
           +  A        NR  +          +   V   HLKS     +       S       
Sbjct: 399 VGRAATVALDGRNRPPLAQTFRRIGGTRAFTVAVNHLKSKNCPHATGPDLDQSDGQGCWN 458

Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +  ++ A+ +  W+       +    ++ GD N             + ++         +
Sbjct: 459 ATRTRAAERVAAWLATSPTGAAADGVLLIGDLNSYAKEDP-----LRALESRGYANLVAR 513

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED---------------- 283
              +             +D+ +        +       I  +E                 
Sbjct: 514 FVGNAGYTYVFRGEAGNLDHALATPPLAARVKAVHAWHINADEPIALQAVPDYKTPAQQA 573

Query: 284 -DIKSRGKRLSDHCPISIDY 302
                   R SDH P+ ID 
Sbjct: 574 AYYAPDAYRSSDHDPVVIDL 593


>gi|332533496|ref|ZP_08409359.1| hypothetical protein PH505_aq00380 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037043|gb|EGI73501.1| hypothetical protein PH505_aq00380 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 910

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 91/319 (28%), Gaps = 40/319 (12%)

Query: 20  VAQKVRLVSWNINTLSEQEG--VSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQE 73
               +R+ S+N+      +G       +    T +++      +      ++AD+V L E
Sbjct: 459 AEADLRVASFNVLNYFNGDGQGGGFPTSRGADTEAEFIRQEAKIVSAISAIEADVVGLME 518

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG- 132
           + +          +        +   N++  D N D     A+    +    +   +   
Sbjct: 519 IENDGFGEFSAIASLVDALNDADSANNYAFVDFNVDQIGTDAITTALIYRANKVEEVGSA 578

Query: 133 --AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSL 183
               ++     NR  +    +     +   V   HLKS         ++         + 
Sbjct: 579 AITTEAPFDFSNRAPIAQSFKSIETDEVFTVAVSHLKSKSCGSASGNNADLGDGQGCWNE 638

Query: 184 LSQQ-AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           +  Q A    DW+  K         ++ GD N             K        +    +
Sbjct: 639 IRTQGANAFADWLDSKPTGVDDEDTILVGDMNAYAMEDPIRAFADKGYKN----VVAEID 694

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289
            D+   +         +D+ V  Q+    ++  +   I  +E                  
Sbjct: 695 GDTLGYSYSFSGRAGSLDHAVATQSLLSKVVAATDWHINADEPISLDYNVEFKSEGQQSS 754

Query: 290 ------KRLSDHCPISIDY 302
                  R SDH P+ ID 
Sbjct: 755 LYSESAYRASDHDPVIIDI 773


>gi|182415509|ref|YP_001820575.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
 gi|177842723|gb|ACB76975.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
          Length = 298

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 83/301 (27%), Gaps = 49/301 (16%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            TA+    +R++S+N+   S                    +++   +    D++  QE  
Sbjct: 35  TTATAPLALRVMSFNLRFAS--------PQPPHAWPERRPIMQHVIEQTAPDLIGTQEGL 86

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR------VLQQSYP 129
                        +         I   +   +     A+  R++               P
Sbjct: 87  YTQLRDLAADLPAY-------EWIGLGREGGSRGEFMAVFYRRERFEPVAFDHFWLSDTP 139

Query: 130 LLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            +    ++     R    +      +G++ +  + H     F   +E     +  L+  +
Sbjct: 140 DVIGSMTWGNNYRRMVTWVRFRERASGREFYFWNTH-----FDHEVETARQKAAILIRDR 194

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L        ++ VP ++ GDFN         +   +     D+        +   N 
Sbjct: 195 LAQL--------DASVPLLLVGDFNCAAGNSPAYETLTREAGLTDTWTAATARVNEGFNT 246

Query: 248 NKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             N          ID+ +    +                   +  G+  SDH P+  D  
Sbjct: 247 FHNYEPPRHDGVRIDWILARTPSA---------VPRAEIVTYRENGQTPSDHFPVLADVQ 297

Query: 304 F 304
           F
Sbjct: 298 F 298


>gi|87303215|ref|ZP_01086008.1| exodeoxyribonuclease III [Synechococcus sp. WH 5701]
 gi|87282110|gb|EAQ74071.1| exodeoxyribonuclease III [Synechococcus sp. WH 5701]
          Length = 283

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 91/304 (29%), Gaps = 68/304 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   S    +  + +    +++ LQE    +A      
Sbjct: 3   IATWNVN----------------SVRSRLEQVVAWLELERPEVLCLQETKVEDAA----- 41

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFSRAGNR 143
                        + +S   S    +  +A+  +      +     LL  + + + A  +
Sbjct: 42  -----FPVGAFSDLGYSAVISGQKAYNGVAILSRLPLEDVRIGFDALLPDEPAVALAEQK 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E     + VL++++ +   L S +  Y  +          L+ ++  +     
Sbjct: 97  RVISARIE----GVRVLNLYVPNGSALRSEKYAYKLA------WLACLERYLKVQDADGD 146

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
           P  + GDFN  ++    +D                   +  ++ L    +  +       
Sbjct: 147 PVCMVGDFNIALDDRDIHDPKRLSGGIMASDPERDALRLALDERLADVFRLFEPERGHWS 206

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+  + Q   +        + +   D       + SDH P+ +
Sbjct: 207 WWDYRSGAWDRDSGWRIDHIYLSQELQERATGCLIHKAVRGND-------KPSDHAPVVV 259

Query: 301 DYDF 304
              +
Sbjct: 260 QVQW 263


>gi|291522762|emb|CBK81055.1| exodeoxyribonuclease III [Coprococcus catus GD/7]
          Length = 258

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 83/305 (27%), Gaps = 78/305 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            KV+L+SWN+N L    G                        LDADI  LQE     A  
Sbjct: 6   DKVKLISWNVNGLRAVVGKGF---------------VDIFNELDADIFCLQETK-LQAGQ 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +  +++           +    ++  AV  +   +  +    +   D+  R  
Sbjct: 50  IELDLPGYEQYWN----------YAERKGYSGTAVFTRIKPLSVRYGMDIAEHDTEGR-- 97

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++ +     ++++++  +     +                + L+         
Sbjct: 98  -------VITLEYDSFYLVNVYTPNSKDGLARLPYRMKWEDDFRNYLKTLEQ-------- 142

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+ GD N                              +     +  F      +  
Sbjct: 143 TKPVVMCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKMTELLAAGFIDTFRYFYPDKTG 202

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF++     + LI  S  + ++            SDHCP
Sbjct: 203 EYSWWSYRFNARKNNAGWRIDYFIVSDALKERLISASIHQEIF-----------GSDHCP 251

Query: 298 ISIDY 302
           + ++ 
Sbjct: 252 VELEL 256


>gi|171317433|ref|ZP_02906625.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
 gi|171097388|gb|EDT42231.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
          Length = 600

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 87/320 (27%), Gaps = 48/320 (15%)

Query: 19  SVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVF 70
             A  VR+ S+N+ N  +       + +   R              +    + L AD++ 
Sbjct: 286 PQAD-VRVASFNVFNYFNGDGAGGGFGDPSDRGAKTPAAFARQEAKIVAALRALRADVIG 344

Query: 71  LQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           L E+ +  +  A    +    +      +   + R   + I  A+    + +       P
Sbjct: 345 LMEIANNGHGPASAVQRLAAQLGGGWRAVDPGTARLGRDAIAVALLYDSRTIE------P 398

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSC------ 181
           +  A        NR  +       G      V   HLKS     +       S       
Sbjct: 399 VGRAATVALDGRNRPPLAQTFRRTGGTRAFTVAVNHLKSKNCPRATGPDLDQSDGQGCWN 458

Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +  ++ A+ +  W+       +    ++ GD N             + ++ +       +
Sbjct: 459 ATRTRAAERVAAWLATSPTGAAADGVLLIGDLNSYAKEDP-----LRALESHGYANLVAR 513

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED---------------- 283
              +             +D+ +        +       I  +E                 
Sbjct: 514 FVGNAGYTYVFRGEAGNLDHALATPPLAARVKAVHAWHINADEPIALQAVPDYKTPAQQA 573

Query: 284 -DIKSRGKRLSDHCPISIDY 302
                   R SDH PI +D 
Sbjct: 574 AYYAPGAYRSSDHDPIVVDL 593


>gi|257468819|ref|ZP_05632913.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC
           49185]
 gi|317063071|ref|ZP_07927556.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC
           49185]
 gi|313688747|gb|EFS25582.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC
           49185]
          Length = 285

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 106/317 (33%), Gaps = 53/317 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-------------VRLVSWNINTLSEQEGVSLWKNSVK 48
           ++K  LAL+F ++   +    K             ++++++NI   +             
Sbjct: 1   MKK-ALALLFVILSVVSFAETKVLYNKKITKNNPKMKIMTYNIAAGANN----------- 48

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
               D  +  +  K ++ DIV +QE+      +    +       +   ++   K   ++
Sbjct: 49  -FKVDLKVTAETIKKVNPDIVAIQEVDRNTNRSGKIDQAQILADLTGYNMVF-GKTIDHD 106

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSF---SRAGNRRAVELLVEINGKKIWVLDIHLK 165
                IA+  K+  + QQS  L    +          R A+   +E+ G ++ +  I+  
Sbjct: 107 GGDYGIAILSKHPILSQQSLILPSFPNGDTTSPGYEQRIALITQIEVPGFEVPITFINTH 166

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                      +    ++  QQ + + +     +      ++AGDFN  +N +   +   
Sbjct: 167 L---------DWHEDPAVRLQQIRTINEITLDMRGIK---ILAGDFNDTVNSVIGKEM-- 212

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 +       +          +  ++ ID   +++                  +  
Sbjct: 213 ------ERYWVSVFDDKIDHRTWPAVNPEVAIDQIYLNKAQVWEAKTY---VPNKENEKD 263

Query: 286 KSRGKRLSDHCPISIDY 302
             +  ++SDH P+ +D 
Sbjct: 264 GIQWNKVSDHIPVIVDL 280


>gi|207724128|ref|YP_002254526.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2]
 gi|206589337|emb|CAQ36299.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2]
          Length = 269

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 96/303 (31%), Gaps = 61/303 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L  +  +      +    +D T +         D++ LQE+   +    +
Sbjct: 1   MRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELKLPDDRYPL 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +             ++   +    +  +A+  +    + +   ++     F+    R
Sbjct: 50  AELDA----------AGYASLFTGQKTYNGVAILARKA-AMPEGRDVIKNIPGFADEQQR 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V    ++ G  + V+  +  +   LDS +  Y        +    L+DW+  + ++  
Sbjct: 99  -IVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLKAEMDAHP 151

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GDFN   +                       ++ ++    +  F   + +     
Sbjct: 152 RLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFEQAD-KLF 210

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID+ ++     +              D      ++ SDH P+ 
Sbjct: 211 SWWDYRLFAFKRNAGLRIDHILLSPELAQRCESCHI-------DRAPRGWEQPSDHTPVV 263

Query: 300 IDY 302
              
Sbjct: 264 AAL 266


>gi|285017614|ref|YP_003375325.1| hypothetical protein XALc_0819 [Xanthomonas albilineans GPE PC73]
 gi|283472832|emb|CBA15337.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 289

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 89/292 (30%), Gaps = 33/292 (11%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   S    ++++S+N+        V +     KR     + +    +    D+   QE+
Sbjct: 27  PTPTSRPMPLKVMSFNVR-------VPIDTEGDKRWEVRRSAMAVLIRAQHPDLFGTQEL 79

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               A         +  F    R  N                   +        P +   
Sbjct: 80  IKRQADYLATKLPDYRWFG-RSRDGNEDGERMGVFYDRHRLKLLASGDFWLSDTPEIPGS 138

Query: 135 DSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            S+     R     L E   +G++ ++ D HL      +S     +   +L+  + + L 
Sbjct: 139 ISWGHPLPRMVNWGLFERIADGRRFYLFDTHLPYREQDES---ARAKGAALILSRLRAL- 194

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                   + VP V+ GDFN   +            D    +   P+  ++  +      
Sbjct: 195 -------PANVPVVLTGDFNTVQDSPTYRTLTRTLTDARTQVT-QPQGPEATFHDFTGHP 246

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ++  ID+ +                  Y   D + +G   SDH P+  ++ +
Sbjct: 247 DR-RIDWILTRG----------LHATRYATLDARPQGHWPSDHFPVIAEFAW 287


>gi|163759458|ref|ZP_02166543.1| exodeoxyribonuclease III [Hoeflea phototrophica DFL-43]
 gi|162283055|gb|EDQ33341.1| exodeoxyribonuclease III [Hoeflea phototrophica DFL-43]
          Length = 260

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 69/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L+ + +  D DI  LQE+ S   V + 
Sbjct: 1   MKIATWNING----------------VKARIENLQAWLRESDPDIACLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+              +            +A+  K               D  +R    
Sbjct: 42  FPRLELEAL-------GYHVETHGQKGFNGVAILSKQSPEEVNRGLPGDDTDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V+ ++L +   +D+ +  Y        +  + L+ +   +     
Sbjct: 92  --IEAVFSKDSGVLRVVSLYLPNGNPVDTEKFPYK------LRWMERLQAFAEDRLALEE 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                   +   +   ++ ++ N       +  + +    
Sbjct: 144 PLVLAGDYNVIPEPVDCHNPKAWEGDALFRPESRTAFRRLE-NLGFTDALRSANDQAETY 202

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L   +  + +          ++ SDH P++
Sbjct: 203 TFWDYQAGAWPKNNGIRIDHLMLSPEAADNLEWANVEKHV-------RGWEKPSDHVPVA 255

Query: 300 IDYDF 304
           I   F
Sbjct: 256 ISLGF 260


>gi|283478229|emb|CAY74145.1| xthA [Erwinia pyrifoliae DSM 12163]
          Length = 300

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L+   +    D++ LQE         +
Sbjct: 33  MKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVHDDM 73

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  K   V  +       +D+      R
Sbjct: 74  FP-------LEEVASLGYHVFCHGQKGHYGVALLCKQQPVAVRRGFAGDNEDA-----QR 121

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +        +  + L+ ++ Q++++  
Sbjct: 122 RIIMADILTPAGPLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLEQQQKADN 176

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
             +I GD N   +                           +     ++         +  
Sbjct: 177 QLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCSFLPEEREWMSTLMNWGLYDTWRTQNA 236

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  +      +           D      ++ 
Sbjct: 237 TVN-DRFSWFDYRSKGFDDNRGLRIDLILASRPLADRCVATGI-------DYDIRAMEKP 288

Query: 293 SDHCPISIDYD 303
           SDH PI  ++ 
Sbjct: 289 SDHAPIWAEFS 299


>gi|254670248|emb|CBA05478.1| exodeoxyribonuclease III [Neisseria meningitidis alpha153]
          Length = 256

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVA 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|332299279|ref|YP_004441200.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica
           DSM 20707]
 gi|332176342|gb|AEE12032.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 360

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 89/349 (25%), Gaps = 59/349 (16%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTT 51
           R +VL  +           Q+  +VS+N+  L +    + W +             +R  
Sbjct: 20  RGFVLFFLLLGSGYCLVAQQRFTIVSYNVENLFDTIPSTRWDDREYLPTARKGWTAERMK 79

Query: 52  SDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                L +   +        ++ LQE+ S  A+ ++                  S R   
Sbjct: 80  RKCHQLAEVISHATAWDIPALIALQEVESVEALEQLAHHTLLRGGNYKTICATGSDR--- 136

Query: 108 NDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLK 165
              H A+        V   + +PL    DS      R  + +   +     + ++  HL 
Sbjct: 137 RGSHVALLYDADRFAVEHTEEWPLRITPDSIY--PTRNLLFVSGRLPSAAPLSLIVCHLP 194

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI------NYLG 219
           S     + E   +    +L  +   L              V+ GDFN         ++  
Sbjct: 195 SRRGGATAEAARAALIEMLRIRTDSLLR-----ANPEQSIVVVGDFNATPEDGLTDSWAV 249

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVMDQNAYKFL---- 270
           +   +    D    +   P   D         +         ID   + +          
Sbjct: 250 SYHAYLSQSDSLAMVDLTPPFTDEQLKTMPPGSYYYRGYWERIDRLFVSRTLLADTRYPR 309

Query: 271 -----------------IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                               +            S     SDH P+    
Sbjct: 310 LELETVRIALPPQKYMHESPAPWGRPRRTYGGDSYLAGPSDHLPLVATL 358


>gi|330829038|ref|YP_004391990.1| exodeoxyribonuclease III [Aeromonas veronii B565]
 gi|328804174|gb|AEB49373.1| Exodeoxyribonuclease III [Aeromonas veronii B565]
          Length = 268

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 76/307 (24%), Gaps = 72/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKIISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   V  +         +      R
Sbjct: 42  -------FPLADVEAMGYHVEFHGQKAHYGVAIMSKQKPVKVEK-----GFPTDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +    E     +    I + +  F       +        +  + L+ ++        
Sbjct: 90  RMIMATFEREDGSL----IKVMNGYFPQGESQDHETKFPAKQKFYEDLQHYLETNHTPDD 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                          L    ++ + +        F     
Sbjct: 146 QLVLIGDMNISPTDLDIGIGEANRKRWLRDGKCSFLPIEREWMERLKGFGLTDTFRAANP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           + C        +           ID  +        + +          D      ++ S
Sbjct: 206 TECERFSWFDYRSKGFDENRGLRIDLIMASDALKDSVTETGI-------DYELRGIEKPS 258

Query: 294 DHCPISI 300
           DH PI  
Sbjct: 259 DHAPIWA 265


>gi|262274649|ref|ZP_06052460.1| exodeoxyribonuclease III [Grimontia hollisae CIP 101886]
 gi|262221212|gb|EEY72526.1| exodeoxyribonuclease III [Grimontia hollisae CIP 101886]
          Length = 300

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 84/311 (27%), Gaps = 74/311 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++S+NIN L                 +    L+   +    D++ LQE+  ++    
Sbjct: 32  SMKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA-- 73

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                           + +         H  +A+  K   V  Q       +D+      
Sbjct: 74  --------FPVEDVEAMGYKVYFHGQKAHYGVAMLCKQTPVRVQKGFPTDGEDA-----Q 120

Query: 143 RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           RR +    +  +G ++ VL+       F       +        +  Q L  ++     +
Sbjct: 121 RRMIMATFKQEDGSEVTVLN-----GYFPQGENIEHETKFPAKRKFYQDLMTYLNASHTN 175

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
               ++ GD N                        ++     +   T+     +  F ++
Sbjct: 176 DEKLIVMGDINISPLDLDIGIGEVNRKRWLKTGKCSFQPEEREMLATLMNWGFVDTFRQQ 235

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                N       +           ID  +   +     I           D      ++
Sbjct: 236 YPDVDNKFSWFDYRSRGFDDNRGLRIDVILATPSLAVDCIDTGI-------DYELRGIEK 288

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 289 PSDHAPIWATF 299


>gi|261401182|ref|ZP_05987307.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970]
 gi|269208860|gb|EEZ75315.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970]
          Length = 256

 Score = 99.6 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               S      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHF-----GLPSLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPKKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++     + L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDV-------RVDLDTRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|327539872|gb|EGF26475.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula
           baltica WH47]
          Length = 286

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 87/303 (28%), Gaps = 56/303 (18%)

Query: 5   YVLALVFFLVPCTASVAQKV----RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
            ++A+   +     S A++     R++S+NI      +G            +D     + 
Sbjct: 30  LLIAIATLIAMPGESSAEETNSSHRVLSYNIKRGYGNDG-----------KTDLPRTAEV 78

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              L  D V LQE+      +    +  W   +           D  +     +A+  + 
Sbjct: 79  ISKLKPDFVGLQEVDERCNRSGKVDQAQWLGEHLDMHAAFAPFMD-YDGGRYGMAILSRY 137

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSP 179
                +S  L   +        R A+   V   +G K+ ++++H             Y  
Sbjct: 138 PIEKTESVELARGR------EPRVALAAHVTLPDGNKLTLVNVHF-----------DYIR 180

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
             ++  +QA  ++++I        P ++ GDFN               ++ +        
Sbjct: 181 DDTVRFEQATKVREFIQSLSN---PAILLGDFNDTPESRTVQLFQDGFVEADKPAD---- 233

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                       +    ID+          +      +               SDH P+ 
Sbjct: 234 ----DSFTFSAEKPDREIDFLFASPETQWTVKTVDVIDEPL-----------ASDHRPVM 278

Query: 300 IDY 302
              
Sbjct: 279 AVL 281


>gi|156974066|ref|YP_001444973.1| hypothetical protein VIBHAR_01777 [Vibrio harveyi ATCC BAA-1116]
 gi|156525660|gb|ABU70746.1| hypothetical protein VIBHAR_01777 [Vibrio harveyi ATCC BAA-1116]
          Length = 446

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 92/291 (31%), Gaps = 36/291 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++LV++NI  L                   Y L+ +Y K    D+V LQE+ +    A
Sbjct: 180 QHLKLVTYNIWALPAVASHIGD---------RYELIPEYVKGY--DVVALQEVFADGREA 228

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +        + +     +     + +D    I  R   V   Q  +P   + D F+   
Sbjct: 229 FLRELAKEYPYQTKMLDKD---GFNIHDGGVTIVSRYPIVNQAQYVFPDCSSTDCFADK- 284

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +   G+   V   H  S     + E+          +Q + +   +     +
Sbjct: 285 --GINYAEIIKGGQAYHVFATHAASSDTDIAREHRQRQ-----FKQMRAMAKSLN--IPA 335

Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251
               V +GDFN   + + G+       +   +    +     S  +   N          
Sbjct: 336 NETVVYSGDFNVNKLKFPGDYQQMIANLSAVEPE--YSGYTASTFDPRINNFAGKALSGG 393

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N   +DY ++          ++  ++  +      +   LSDH P+S   
Sbjct: 394 DNVEYLDYVMVSSEYGAKSFNDNRVDVPRSTAASLWKHYNLSDHFPVSTVL 444


>gi|269926406|ref|YP_003323029.1| Endonuclease/exonuclease/phosphatase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790066|gb|ACZ42207.1| Endonuclease/exonuclease/phosphatase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 271

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 80/290 (27%), Gaps = 37/290 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +R++S+N+     ++G + W +             +   + + D++  QE+   N  
Sbjct: 9   SADIRVMSFNVRGAVHKDGENAWDHRASLN-------LRTILSNNPDLIGFQEVQEGN-- 59

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----- 135
                   +      ++ I           + AI  +K  +  +      L         
Sbjct: 60  -----LQKYQEMRDYDKYIGLQYGAREPWEYAAIYWKKDKLERINSGGFWLNEDCTQMGL 114

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            +  A  R A   L E     +     +                    L  Q + +    
Sbjct: 115 GWDAACIRVATWCLFEHKASGLRFFHFNTHL---DHEGRTARVEGTKKLLSQIESI---- 167

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253
                +  P +I GDFN                          ++K+         +   
Sbjct: 168 ---VPNRFPVLITGDFNCTPETEPYKLFMDAGFKDAYLEAGCMEDKEGFTFHRFTGKPTH 224

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ID+ ++     ++ I+       ++ D         SDH P+  D  
Sbjct: 225 SGRIDWILVRDGNARWYIRS------FHLDRTGEPPIFPSDHFPLIADLS 268


>gi|313158069|gb|EFR57474.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 297

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 82/313 (26%), Gaps = 41/313 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           ++K +  L+F      A+ ++   ++L+S+NI  +        +        +      +
Sbjct: 16  MKKLLFTLLFCAAAAAAAGSEPAELKLLSYNIRYIGAPGDEGDFA-----WDARKEASIR 70

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             +++  D++  QE         V     +                 +  I     +R++
Sbjct: 71  MIRDVRPDVIGFQEPRRQQVAYLVEQLPEYGHIEMGRDFGAKDDPGEHLMIMY---LRER 127

Query: 120 NVRVLQQSYPLLGAKDS----FSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173
              +    Y L    D     +     R  V   +     G++  + D HL        L
Sbjct: 128 YELLDHGHYWLSETPDEVSQGWDGRCRRVTVWARLRDRATGREFCLFDTHLDHIGKTARL 187

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPN 231
           E        +                    P  I GD N      G    + ++K +   
Sbjct: 188 EGARLNVERMR------------SIAGKRTPQFIVGDMNATAGTPGGVCLEPYFKWLKSA 235

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                                  + ID+                       D      + 
Sbjct: 236 CEEAPLTD--PRPTYHGFGKAKPLHIDHIFYRCAEPLRYQL---------LDSTGYGVQY 284

Query: 292 LSDHCPISIDYDF 304
           LSDH PI   + F
Sbjct: 285 LSDHYPIVCTFRF 297


>gi|167033891|ref|YP_001669122.1| exonuclease III [Pseudomonas putida GB-1]
 gi|166860379|gb|ABY98786.1| exodeoxyribonuclease III [Pseudomonas putida GB-1]
          Length = 270

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 82/313 (26%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V +NIN L                 +    L    +    D++ LQE    +     
Sbjct: 1   MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+  +   +           D+      R
Sbjct: 41  ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLHKGFATDEDDA-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     + +G  I +++       F       +        +    L+  +  +  + 
Sbjct: 90  RFIWGTFPDADGNPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLEGQFRND 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            P ++ GD N                        ++L    ++ + +     +  F    
Sbjct: 145 QPLLVMGDMNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +  Q+    +            D      +
Sbjct: 205 PEVTDRFSWFDYRSRGFEDDPKRGLRIDLIMASQHLVPRIKAAGV-------DYELRAME 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI ++  
Sbjct: 258 KPSDHAPIWLELS 270


>gi|51596420|ref|YP_070611.1| exonuclease III [Yersinia pseudotuberculosis IP 32953]
 gi|108807521|ref|YP_651437.1| exonuclease III [Yersinia pestis Antiqua]
 gi|108811797|ref|YP_647564.1| exonuclease III [Yersinia pestis Nepal516]
 gi|145598263|ref|YP_001162339.1| exonuclease III [Yersinia pestis Pestoides F]
 gi|149365909|ref|ZP_01887944.1| exodeoxyribonuclease III [Yersinia pestis CA88-4125]
 gi|153949149|ref|YP_001400949.1| exonuclease III [Yersinia pseudotuberculosis IP 31758]
 gi|161484800|ref|NP_669464.2| exonuclease III [Yersinia pestis KIM 10]
 gi|161511386|ref|NP_993308.2| exonuclease III [Yersinia pestis biovar Microtus str. 91001]
 gi|162420660|ref|YP_001606769.1| exonuclease III [Yersinia pestis Angola]
 gi|165927745|ref|ZP_02223577.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939329|ref|ZP_02227877.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009140|ref|ZP_02230038.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210881|ref|ZP_02236916.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401408|ref|ZP_02306905.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420251|ref|ZP_02312004.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426574|ref|ZP_02318327.1| exodeoxyribonuclease III [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167469881|ref|ZP_02334585.1| exodeoxyribonuclease III [Yersinia pestis FV-1]
 gi|170024319|ref|YP_001720824.1| exonuclease III [Yersinia pseudotuberculosis YPIII]
 gi|186895466|ref|YP_001872578.1| exonuclease III [Yersinia pseudotuberculosis PB1/+]
 gi|218929268|ref|YP_002347143.1| exonuclease III [Yersinia pestis CO92]
 gi|229894844|ref|ZP_04510024.1| exonuclease III [Yersinia pestis Pestoides A]
 gi|229897588|ref|ZP_04512744.1| exonuclease III [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229898233|ref|ZP_04513381.1| exonuclease III [Yersinia pestis biovar Orientalis str. India 195]
 gi|229902093|ref|ZP_04517214.1| exonuclease III [Yersinia pestis Nepal516]
 gi|270490729|ref|ZP_06207803.1| exodeoxyribonuclease III [Yersinia pestis KIM D27]
 gi|294503787|ref|YP_003567849.1| exodeoxyribonuclease III [Yersinia pestis Z176003]
 gi|51589702|emb|CAH21332.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis IP 32953]
 gi|108775445|gb|ABG17964.1| Exodeoxyribonuclease III [Yersinia pestis Nepal516]
 gi|108779434|gb|ABG13492.1| Exodeoxyribonuclease III [Yersinia pestis Antiqua]
 gi|115347879|emb|CAL20799.1| exodeoxyribonuclease III [Yersinia pestis CO92]
 gi|145209959|gb|ABP39366.1| Exodeoxyribonuclease III [Yersinia pestis Pestoides F]
 gi|149292322|gb|EDM42396.1| exodeoxyribonuclease III [Yersinia pestis CA88-4125]
 gi|152960644|gb|ABS48105.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis IP 31758]
 gi|162353475|gb|ABX87423.1| exodeoxyribonuclease III [Yersinia pestis Angola]
 gi|165912670|gb|EDR31299.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920359|gb|EDR37636.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991695|gb|EDR43996.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208061|gb|EDR52541.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166961946|gb|EDR57967.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049104|gb|EDR60512.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167054450|gb|EDR64262.1| exodeoxyribonuclease III [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169750853|gb|ACA68371.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis YPIII]
 gi|186698492|gb|ACC89121.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis PB1/+]
 gi|229680989|gb|EEO77084.1| exonuclease III [Yersinia pestis Nepal516]
 gi|229688799|gb|EEO80867.1| exonuclease III [Yersinia pestis biovar Orientalis str. India 195]
 gi|229693925|gb|EEO83974.1| exonuclease III [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229702317|gb|EEO90336.1| exonuclease III [Yersinia pestis Pestoides A]
 gi|262362092|gb|ACY58813.1| exodeoxyribonuclease III [Yersinia pestis D106004]
 gi|262365769|gb|ACY62326.1| exodeoxyribonuclease III [Yersinia pestis D182038]
 gi|270339233|gb|EFA50010.1| exodeoxyribonuclease III [Yersinia pestis KIM D27]
 gi|294354246|gb|ADE64587.1| exodeoxyribonuclease III [Yersinia pestis Z176003]
 gi|320015154|gb|ADV98725.1| exonuclease III [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 268

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 79/310 (25%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +         H  +A+  K   +  +       +D+      R
Sbjct: 42  FP-------LEDVSQHGYHVFYHGQKGHYGVALLTKEQPLAVRRGFPSDEEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       ++    L+ ++ ++     
Sbjct: 90  RIIMADLATPQGTLTVIN-----GYFPQGESRDHPIKFPAKARFYADLQRYLEEQLSPEA 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                          L    ++ + +     +  F     
Sbjct: 145 QVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWLERLQNWGLVDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q      I           D      ++ S
Sbjct: 205 DCNDHFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYAIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH P+  ++ 
Sbjct: 258 DHAPVWSEFS 267


>gi|119485388|ref|ZP_01619716.1| Endonuclease/exonuclease/phosphatase [Lyngbya sp. PCC 8106]
 gi|119457144|gb|EAW38270.1| Endonuclease/exonuclease/phosphatase [Lyngbya sp. PCC 8106]
          Length = 1127

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 91/348 (26%), Gaps = 64/348 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------------TSDYTLLRQYAK 62
                V   +++ S N+        VS    S   +                  L    +
Sbjct: 646 ATPEDVGGDLKVASLNVLNFFTTLDVSGNPGSGPNSLSPRGADNQAEFDRQLEKLVTTLE 705

Query: 63  NLDADIVFLQEMGSY-----------------NAVAKVFPKNTWCIFYSTERLINHSKRD 105
           ++DAD+V L E+ +                  N +       T+         ++     
Sbjct: 706 DIDADVVGLVELENEFGGDQNGDGQFAIDTLVNELNNRVGAGTYAYVDPGVPFVDTGDAI 765

Query: 106 SNNDIH----TAIAVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVE--INGKKI 157
           S   I+      IA       +     P LG   +       NR  + +  E    G+  
Sbjct: 766 SVGAIYKTNSVQIAPGTSVEILTDSDLPALGLGGTVFDGVDTNRAPLAVSFEELSTGEVF 825

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCS-----LLSQQAQWLKDWITQKK--ESLVPFVIAGD 210
            +   H KS     S +N               + A+ L  W+           F+I GD
Sbjct: 826 TLAVNHFKSKGGTGSGDNADIGDGQGNFNGTRLRGAEALDAWLNSDPTGSGDSDFLIVGD 885

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
            N               ++         +       +         +DY + +Q+    +
Sbjct: 886 LNAYAQEDPI-----TFLEAEGYTDLIEEFVGDDAYSFVFDGQFGYLDYGLANQSLLSQV 940

Query: 271 IQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303
              +   +  +E D                     R SDH P+ I  D
Sbjct: 941 TGTTEWHVNADEPDAFDYNLDFGRDPSLFDGQDPFRNSDHDPVIIGLD 988


>gi|313887293|ref|ZP_07820984.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923212|gb|EFR34030.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 360

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 87/349 (24%), Gaps = 59/349 (16%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTT 51
           R +VL  +           Q+  +VS+N+  L +    + W +             +R  
Sbjct: 20  RGFVLFFLLLGSGYCLVAQQRFTIVSYNVENLFDTIPSTRWDDREYLPTARKGWTAERMK 79

Query: 52  SDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                L +   +        ++ LQE+ S  A+ ++                  S R   
Sbjct: 80  RKCHQLAEVISHATAWDIPALLALQEVESVEALEQLAHHTLLRGGNYKTICATGSDR--- 136

Query: 108 NDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLK 165
              H A+        V Q + +PL    DS      R  + +   +     +  +  HL 
Sbjct: 137 RGSHVALLYDADRFAVEQTEEWPLRITPDSIY--PTRNLLFVSGRLPSAAPLSFIVCHLP 194

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-- 223
           S     + E   +    +L  +   L              V+ GDFN        +    
Sbjct: 195 SRRGGATAEAARAALIEMLRMRTDSLLR-----ANPEQSIVVVGDFNATPEDGLTDSWAA 249

Query: 224 ----FWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVMDQNAYKFL---- 270
               +    D    +   P   D         +         ID   + +          
Sbjct: 250 SYHTYLSQSDSLAMVDLTPPFTDEQLKTMPPGSYYYRGYWERIDRLFVSRTLLTETRYPH 309

Query: 271 -----------------IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                               +            S     SDH P+    
Sbjct: 310 LELETVRIALPPQKYMHESPAPWGRPRRTYGGDSYLAGPSDHLPLVATL 358


>gi|291613446|ref|YP_003523603.1| endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus
           ES-1]
 gi|291583558|gb|ADE11216.1| Endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus
           ES-1]
          Length = 247

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 94/288 (32%), Gaps = 52/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
            +++ ++NI+             S          LR+  + LDADIVFLQE+   +A   
Sbjct: 3   TLKIATYNIH----------KGFSQFNRRVVLHELRERLRELDADIVFLQEVQGEHAGHV 52

Query: 80  -VAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                +P      F + E   +H+       ++ H   AV  +   +            S
Sbjct: 53  QRHADYPAEPQHEFLADEFWAHHAYGMNAVYDEGHHGNAVLSRFPILQA-----FNKDVS 107

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R  +R  +   VEI G+ +  L  H   F                   Q + L +++ 
Sbjct: 108 AHRFESRGLLHCEVEIGGQLVHCLCAHFGLFAKGQ-------------RAQMRALVEYVL 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKI 255
                  P VIAGDFN         +   + +     +      ++     +  +     
Sbjct: 155 NDIPKDAPLVIAGDFNDW------RNQLSRALAKEIGVQDVFGLQEGKPARSFPSRIPVF 208

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +D   +               + Y +  I  + +RLSDH  +S   +
Sbjct: 209 RLDRIYVRG-----------FSVQYCDVHIGGKWRRLSDHAALSAQLE 245


>gi|294625453|ref|ZP_06704084.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294664696|ref|ZP_06730028.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292600276|gb|EFF44382.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605521|gb|EFF48840.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 299

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 92/287 (32%), Gaps = 36/287 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             A+ ++++ LV+ N++   E               +    + +  K L  D++ LQE+ 
Sbjct: 39  SPATASREMTLVTLNLHHDRED------------WPARRAHIAKELKRLAPDVIALQEVI 86

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  V  +  W            S            A+  +   +      L    D
Sbjct: 87  ERRG--GVENQAAWLARKLGYDYTFASVDPVGAPKRYGNALLSRRRVLATHQRLLQPLDD 144

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A  L V+++G+ + V   HL         E   +    + ++Q   L D+I
Sbjct: 145 Y------RVAAHLQVDVDGQPVNVYVTHLN--------ERADARGTGIRTRQVADLLDFI 190

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                +  P VIAGDFN   + L          D   S+ R      S  N +   R   
Sbjct: 191 ASN-SAQAPVVIAGDFNTAADTLDLQALRRGYGDSYGSVHRNSDATVSTLNMHVFDR-PA 248

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+    QN           +  Y      + G+  SDH  + +  
Sbjct: 249 RIDHVFFQQNRLLAREARILFDTPY------AEGRWASDHYGVWVRL 289


>gi|289671214|ref|ZP_06492289.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 303

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 88/287 (30%), Gaps = 36/287 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +++  +++ LV+ N++   E               +    + +  K L  D++ LQE+ 
Sbjct: 40  PSSTAPREMTLVTLNLHHDRED------------WPARRAYIAKELKQLAPDVIALQEVI 87

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  V  +  W            S            A+  +   +      L    D
Sbjct: 88  ERRG--SVENQAAWLARKLGYDYTFASVDPVGAPKRYGNALLSRRNVLATHQRLLQPLDD 145

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A  L V+++G+ + V   HL         E T +   +   +Q   L D++
Sbjct: 146 Y------RVAAHLQVDVDGQPVNVYVTHLN--------ERTDARGTATRKRQVTDLLDFV 191

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                   P VIAGD N   + L          D   S+ R      S  N         
Sbjct: 192 ASN-SEQAPVVIAGDLNTAADTLDLEALRKGYGDSYGSVHRNSDATVSTLNMQV-FDKPA 249

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+    QN           +  Y E      G+  SDH  + +  
Sbjct: 250 RIDHVFFQQNRLLAREARILFDTPYAE------GRWASDHYGVWVRL 290


>gi|152967558|ref|YP_001363342.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
 gi|151362075|gb|ABS05078.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
          Length = 868

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 38/318 (11%)

Query: 16  CTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +V   V++ ++N+ N      G      S          +    + L AD+V L E+
Sbjct: 450 APEAVGGDVQVGAFNVLNYFLTLGGAGRGATSQAELEEQAGKIVPAIRALGADVVTLMEI 509

Query: 75  GSY--------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                              + +          ++   +         + I  AI  ++  
Sbjct: 510 EDTASTGRNPGNADLALEDLVRRLNTAAGSQEWAYVPMPAELYAVDRDVIRNAIIYKQDV 569

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V+ + +     G  D    +  R  +      +G    V+  H KS     + +N  +  
Sbjct: 570 VQPVGEPV---GLVDETVWSNAREPIAQTFVKDGDAFTVVADHFKSKGGTGTGDNADTGQ 626

Query: 181 CSL---LSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
            S      +QAQ L  ++ +  +       V  GDFN               +  +  L+
Sbjct: 627 GSFNGDRVRQAQSLAGFLARLRESTGDADVVALGDFNAYTQEDPIE-----VLRTDAGLV 681

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
              +  D+   +         +D+ +        +   +   I   E             
Sbjct: 682 DLGERFDAGRYSYVFDALSGSLDHALASAELTAKVTDATHWNINSVESFAYQYTGDPALY 741

Query: 290 ----KRLSDHCPISIDYD 303
                R SDH P+    D
Sbjct: 742 APNPYRSSDHDPVVFGID 759


>gi|313157885|gb|EFR57291.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 344

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 36/348 (10%), Positives = 84/348 (24%), Gaps = 56/348 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTSD 53
           M ++ +  L            +  +++ +N+    +        +     +   K  ++ 
Sbjct: 1   MKKRLIFTLFLAAFVVMCFAQKPCKVMFYNLENFFDTINDPEVHDDEFTPEGPKKWNSAK 60

Query: 54  Y-------TLLRQYAKNLD---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
           Y         +       D     ++ + E+ + + +  +               I H  
Sbjct: 61  YFKKLGNIERVLFDIAAADKNYPAVIGVSEVETRSVLEDIVATPK---LAPGNYRIVHYD 117

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                 +  A   R    ++   S+P+            R  + +   I  +  + +  H
Sbjct: 118 SPEARGVDVAFMYRPDVFKLE-GSFPVKTVVPQLPNFKTRDILTMWGTIENEPFFFMVAH 176

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-- 221
             S             +     +Q + + D + +   +    V  GDFN           
Sbjct: 177 WPSRLGGKDASEFKRIAV---GEQMRRIADSVLKINPATK-VVAMGDFNDDPTDESIAEG 232

Query: 222 ---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK---------- 268
                  K + P D    F     +              D  V+ +N             
Sbjct: 233 LGAKAKMKDLKPGDFYNPFADMLKAGLGTLAYGDAWNLFDNIVVTENLATGSEGRLRLQK 292

Query: 269 ----------------FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                              +  +           +     SDH P+ I
Sbjct: 293 APGSKFYGNIFKRYYMLQKEGQYKGYPLRTYVGNNFQGGYSDHFPVYI 340


>gi|302566051|pdb|3I5V|A Chain A, Crystal Structure Of Beta Toxin 275-280 From
           Staphylococcus Aureus
 gi|302566052|pdb|3I5V|B Chain B, Crystal Structure Of Beta Toxin 275-280 From
           Staphylococcus Aureus
 gi|302566053|pdb|3I5V|C Chain C, Crystal Structure Of Beta Toxin 275-280 From
           Staphylococcus Aureus
 gi|302566054|pdb|3I5V|D Chain D, Crystal Structure Of Beta Toxin 275-280 From
           Staphylococcus Aureus
          Length = 313

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 91/294 (30%), Gaps = 28/294 (9%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS N+  LS      L+ N  +   +D      Y K  + D+V   E     A  K
Sbjct: 29  DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 82

Query: 83  VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T                  S       +A+  K     +  +      
Sbjct: 83  LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 142

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK + V+  H +S    DS          + ++Q + + D+
Sbjct: 143 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 197

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248
           + +          I GD N          D  K ++ ND L                  N
Sbjct: 198 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 256

Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                   +DY   D++  +   L+ E  +E     D         SDH PI  
Sbjct: 257 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVDGYVYNDFSDHYPIKA 310


>gi|118589109|ref|ZP_01546516.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614]
 gi|118438438|gb|EAV45072.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614]
          Length = 260

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    + ++ K    D+  LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARIDTVLEWLKEASPDVACLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K      Q        D  +R    
Sbjct: 41  ------NFPRQPFEDLGYAVETHGQKGFNGVALLSKTPLDDIQRGLPGNDADEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  +      + +  ++L +   L + + +Y        +    L     ++ E   
Sbjct: 92  --IEARLATEKGPVRIGCLYLPNGNPLGTEKFSYK------LEWMDRLITHAQKRLEEET 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF++ GD+N   +               +   +   ++ +             ++     
Sbjct: 144 PFLLLGDYNVIPDPVDAKNPQNWLEDALFQPESRQRFRALTHLGLTEAVRSCTEAPETFT 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ +M   A                D      ++ SDH P+ +
Sbjct: 204 FWDYQAGAWQKNNGIRIDHILMSPQATDRFSGCGI-------DKHVRGWEKPSDHVPVWV 256

Query: 301 DY 302
             
Sbjct: 257 KL 258


>gi|327313721|ref|YP_004329158.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
 gi|326945022|gb|AEA20907.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
          Length = 371

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/332 (12%), Positives = 90/332 (27%), Gaps = 46/332 (13%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTT---- 51
            + +L LVF L+   ++   ++ +V  N   L +        +   L  +    T     
Sbjct: 47  MRTLLILVFTLLSVPSAAQSRLTIVELNAENLFDTRHDTLKNDYEFLPDSPRHWTRTKYW 106

Query: 52  SDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
                  Q               DIV L E+ + + +  +  ++        +    +  
Sbjct: 107 EKLNRTGQTIIACGEDSSGWHLPDIVGLCEVENDSVLFDLTRRS-----LLRKARYEYVM 161

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDI 162
             S++     +A+              +           R  + +  EI NG  + V  +
Sbjct: 162 TASDDRRGIDVALLYSPFSFRLIKADTIHVAPMADMRPTRDILHVEGEIENGDTLHVFLL 221

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           H  S    +     +    + L  QA      +     +    ++ GDFN   +      
Sbjct: 222 HAPSRMGGERYSRPFRLYVAGLLCQAVDSLRSL----YADPRILVMGDFNDYADSPSVRL 277

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS------ 276
              +       +       +      +       +D  ++ +N   ++I           
Sbjct: 278 LCTRGFVN---VSARAHGNNGAKGTYRYHGAWGSLDQILVSENLCPWVISCHVHDAAFLL 334

Query: 277 --------EILYNEDDIKSRGKRLSDHCPISI 300
                          +        SDH P+ +
Sbjct: 335 EEDDKYGGVKPRRNYNGMRYNNGFSDHLPLVL 366


>gi|90412320|ref|ZP_01220325.1| hypothetical protein P3TCK_09808 [Photobacterium profundum 3TCK]
 gi|90326811|gb|EAS43204.1| hypothetical protein P3TCK_09808 [Photobacterium profundum 3TCK]
          Length = 286

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 74/281 (26%), Gaps = 22/281 (7%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
               ++S+NI   S+        +      +   ++       + DI  LQE  +   + 
Sbjct: 19  DDFNVMSFNIRN-SKDSVDGSVYDGNNTWENRKEIVSSIFSEQNIDIAGLQEAFNDQIIY 77

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + +                          V+           P + A   +    
Sbjct: 78  LARNLSNYGWVGVGRDDGKTKGEAVPIFYRADKYVKLGGGTFWLSETPEVVASVGWDADL 137

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R    + +E       VL  +     F    +     S  LLS++A+ +        + 
Sbjct: 138 TRITSWVRLEDKESSKRVLVFNAH---FDHIGKVARQQSAKLLSKKAKEIIG------DD 188

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR---CNANKNLRNKIPID 258
               ++ GD N + + + + +      +   S    P E                   ID
Sbjct: 189 NDAVIVLGDLNFERSDVASYEALTSLFNDARSTTIKPFEGIDGKEYTYHGYFKEPTEDID 248

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           Y  ++                +   ++   G   SDH  + 
Sbjct: 249 YIFVNDKL---------RVNTFKYVNVIKDGIYSSDHLSVI 280


>gi|70732721|ref|YP_262484.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf-5]
 gi|68347020|gb|AAY94626.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf-5]
          Length = 358

 Score = 99.2 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 94/340 (27%), Gaps = 71/340 (20%)

Query: 12  FLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--------DYTLLR 58
             V C+A  A     Q +++++WN+  L+ +  V     +                  + 
Sbjct: 36  LAVNCSAQAAPLVPGQALKVMTWNLQYLAGKRYVFWNDQAQGEDEQPTLEDMAFSLDEVA 95

Query: 59  QYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKR 104
           +  ++   D+V LQE+ +                 +  ++P +T    +  + + +    
Sbjct: 96  RVIRDEQPDLVLLQEVDNGAKASAYQDQLKLLQERLTDLYPCSTQAYDWKADFVPSP-HI 154

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDI 162
             +     A   R +     +   P         +   R A+ L      +G ++ VL+ 
Sbjct: 155 FGSVGRQLATLSRYRIDHAERLQLPTAEHGFIGRQFQPREALLLSYLPLNDGGQVAVLNT 214

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------- 212
           HL                    S+Q   +   + + +    P++I GDFN          
Sbjct: 215 HL----------ERARTPGQTQSRQVAAIGKVLDKLEGRGTPWLIGGDFNLLPLGQYQRL 264

Query: 213 -----RKINYLGNNDDFWK---TIDPNDSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVM 262
                   +        W     I  N       +        N          +DY   
Sbjct: 265 SDVQRAPYSADSPLHLLWDKYPMIPSNTQASGVDRAHWLTHYPNDPSLDGPDRTVDYLFY 324

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                  +    R+SDH P+   +
Sbjct: 325 SPRLK-----------RVESRVRQDDTLRISDHLPVLARF 353


>gi|15602556|ref|NP_245628.1| exonuclease III [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12720975|gb|AAK02775.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 267

 Score = 99.2 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 83/311 (26%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKVISFNINGL----------------RARPHQLEAVIEKYQPDVLGLQEIKVADEMFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K      +      ++++  R  
Sbjct: 45  ELVEHLGYHVFHH------------GQKGHYGVALLTKQAPKAVRKGFPTDSEEAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E +   + V++       F       +        +    L+ ++ Q   +
Sbjct: 91  ---IIMADLETDFGLLTVIN-----GYFPQGESRDHETKFPAKEKFYADLQQYLEQDHNA 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N                          L    ++   +     +  F   
Sbjct: 143 NNPIIIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFLPEEREWMNRLYGYGLVDTFRHL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID+ + +       ++                 ++
Sbjct: 203 NPDVNDQFSWFDYRSKGFDDNRGLRIDHIIANHALAARCVETGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH P+   +
Sbjct: 256 PSDHAPVWAVF 266


>gi|189465293|ref|ZP_03014078.1| hypothetical protein BACINT_01641 [Bacteroides intestinalis DSM
           17393]
 gi|189437567|gb|EDV06552.1| hypothetical protein BACINT_01641 [Bacteroides intestinalis DSM
           17393]
          Length = 284

 Score = 99.2 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 88/309 (28%), Gaps = 43/309 (13%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
             ++A V  +  C+     KV ++S+NI        +    +S+           Q    
Sbjct: 8   SVLVAFVLLVASCSKQPEAKVDVMSFNIR-------LDHVADSLNNWKYRKDAAAQMIIY 60

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
              D+V +QE+              + +               +    T      K+   
Sbjct: 61  YAPDVVGMQEVLKNQLDDLKNRLPQYTVLGVGRADGKEKGEYCSLFYKTDRFDLMKSGNF 120

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                P       +  A  R     ++  +++GK++   + H     F    +     S 
Sbjct: 121 GLSETPDSIGIKGWDAACERIVTWAVLKDKVSGKELAAFNTH-----FDHIGKVARRESA 175

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            LL  + + +         S +P VI GDFN  ++           +        +    
Sbjct: 176 VLLLAKIREIA--------SDLPVVITGDFNGTVDSDPI-----SVLTEGGMQNTYSASD 222

Query: 242 DSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                              +  ID+  ++      ++   F  I    D+       LSD
Sbjct: 223 IVYGPTWSFHDFGRIPVEERQLIDFIFVNGQ----VVANKFRVIADKPDNG-----YLSD 273

Query: 295 HCPISIDYD 303
           H PI  +  
Sbjct: 274 HAPIQANLT 282


>gi|261391913|emb|CAX49373.1| exodeoxyribonuclease III (exonuclease III; EXO III) [Neisseria
           meningitidis 8013]
          Length = 256

 Score = 99.2 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++     + L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMVEALKDV-------RVDLETRALERPSDHAPVA 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|269102062|ref|ZP_06154759.1| exodeoxyribonuclease III [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268161960|gb|EEZ40456.1| exodeoxyribonuclease III [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 268

 Score = 99.2 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 87/310 (28%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+   +    D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  +     G       A  R
Sbjct: 42  -------FPLADVEAMGYKVYHHGQKAHYGVALLCKQEPIEVKK----GFPTDDDDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NGKKI +++       F       +        +    L  ++     +  
Sbjct: 91  MIMATFEQENGKKITIMN-----GYFPQGDNINHETKFPAKEKFYADLMTYLNTYHNNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++      + KT+     +  F +   
Sbjct: 146 ELIVMGDINISPIDLDIGIGDNNAKRWLKTGKCSFQPIERQWLKTLLDWGFIDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID  +   +  +  I+          D      ++ S
Sbjct: 206 TVDDQYSWFDYRSKGFDDNRGLRIDVILATPSLAERCIESGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   ++
Sbjct: 259 DHAPIWSTFN 268


>gi|157115453|ref|XP_001658213.1| nocturnin [Aedes aegypti]
 gi|108876911|gb|EAT41136.1| nocturnin [Aedes aegypti]
          Length = 418

 Score = 99.2 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 100/318 (31%), Gaps = 40/318 (12%)

Query: 16  CTASVAQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             A+ + ++R+  WN+   TL    +G                 + Q     D DI+ LQ
Sbjct: 90  AAAANSAQIRIFQWNMLSQTLGMHNDGFVKCPIDALTWECRRYQVIQEIVQNDPDIICLQ 149

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           E+  +  + K+     +   +  +         D+N     A+  +K  + +L     +L
Sbjct: 150 EVDHFKFLQKILATQNYEGVFFPKPDSPCLYINDNNGPDGCAVFYKKDRLELLNHFTRIL 209

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                 S      A+    + N ++I V   HLK+           +    L ++Q + L
Sbjct: 210 EVWRVQSNQVAIAALFRTRDTN-QEICVTTTHLKA--------RKGALLSKLRNEQGKDL 260

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYL---------------GNNDDFWKTI-----DPN 231
             +I        P ++ GDFN +                     +D   +       + +
Sbjct: 261 LYFIDGVA-EKRPVILCGDFNAEPIEPVYSTVLNYKPLGLGSAYSDLLAQEFPQLAQEND 319

Query: 232 DSLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
            +++   +   +        + +        IDY    ++         F        D 
Sbjct: 320 QNVVNMAELSAAYEPPYTTWKIREEGEVCHTIDYVFYSKDQITVKNCLMFPAGEEISPDR 379

Query: 286 KSRGKRLSDHCPISIDYD 303
               +  SDH  +  D++
Sbjct: 380 TPCYQYPSDHFSLVCDFE 397


>gi|78776910|ref|YP_393225.1| endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497450|gb|ABB43990.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 334

 Score = 99.2 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 100/351 (28%), Gaps = 78/351 (22%)

Query: 8   ALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDYTL 56
            L F L+  T+   +  +++ ++N+  L + E      +          + K        
Sbjct: 3   ILFFTLLIYTSLFGETILKIATYNVENLFDLETSGYEYSEYIPNSTSEWNQKNYKIKLKN 62

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           + Q  K++DADI+ L+E+ S  A+  +         Y       +       +    +A+
Sbjct: 63  IAQVIKDIDADIIALEEVESLQALLDLRFALKQSGLYY-----GYYSIADKKNTTVKVAL 117

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K   V  +   +            R  +E    INGK++++   H KS          
Sbjct: 118 LSKVPFVYSKEISVTQT------YEYRNILETKFNINGKELYIFVNHWKSKSG------- 164

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------------ 218
              + S     A+ L   + +        ++ GDFN                        
Sbjct: 165 ---AESQRVLCAKSLMKRVKE-IGFDKNIILLGDFNSDYEEYLKFAKKREHNDTDGITGI 220

Query: 219 --------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-- 268
                     N               +    + +  +      K  +D  ++ Q+     
Sbjct: 221 NHILGTINQRNSALHVNYQKESFYNLWYDTDEDKRYSYLYRGKKEVLDNILISQSLLNAK 280

Query: 269 -----------------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                            F     +   +      K +G+  SDH P+   +
Sbjct: 281 DVSYIHNTISNFNKEYLFKKNNIYRWQISKARVKKHKGQGYSDHLPLVARF 331


>gi|123442505|ref|YP_001006482.1| exonuclease III [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|122089466|emb|CAL12314.1| exodeoxyribonuclease III [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 268

 Score = 99.2 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 79/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +         H  +A+  KN  +  +       +D+      R
Sbjct: 42  FP-------LEEVSQHGYHVFYHGQKGHYGVALLTKNEPLAIRRGFPTDEEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +        +    L+ ++ Q+  +  
Sbjct: 90  RIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLSADA 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                          L     + + +     +  F     
Sbjct: 145 QVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  +      I           D      ++ S
Sbjct: 205 DCNDQFSWFDYRSRGFDENRGLRIDLLLASRPLAARCIATGI-------DYDIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+  ++
Sbjct: 258 DHAPVWSEF 266


>gi|32476790|ref|NP_869784.1| hypothetical protein RB11105 [Rhodopirellula baltica SH 1]
 gi|32447336|emb|CAD77162.1| probable secreted protein [Rhodopirellula baltica SH 1]
          Length = 286

 Score = 99.2 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 86/303 (28%), Gaps = 56/303 (18%)

Query: 5   YVLALVFFLVPCTASVAQKV----RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
            ++A+   +     S A++     R++S+NI      +G            +D       
Sbjct: 30  LLIAIATLIAMPGESSAEETNSSHRVLSYNIKRGYGNDG-----------KTDLPRTADV 78

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              L  D V LQE+      +    +  W   +           D  +     +A+  + 
Sbjct: 79  ISKLKPDFVGLQEVDERCNRSGKVDQAQWLGEHLDMHAAFAPFMD-YDGGRYGMAILSRY 137

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSP 179
                +S  L   +        R A+   V   +G K+ ++++H             Y  
Sbjct: 138 PIEKTESVELARGR------EPRVALVAHVTLPDGNKLTLVNVHF-----------DYIR 180

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
             ++  +QA  ++++I        P ++ GDFN               ++ +        
Sbjct: 181 DDTVRFEQATKVREFIRSLSN---PAILLGDFNDTPESRTVQLFQDGFVEADKPAD---- 233

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                       +    ID+          +      +               SDH P+ 
Sbjct: 234 ----DSFTFSAEKPDREIDFLFASPETQWTVKTVDVIDEPL-----------ASDHRPVM 278

Query: 300 IDY 302
              
Sbjct: 279 AVL 281


>gi|301311515|ref|ZP_07217442.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300830601|gb|EFK61244.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 344

 Score = 99.2 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/350 (10%), Positives = 96/350 (27%), Gaps = 59/350 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50
           ++ ++  L+FF  P   + A   +++++N+    +        +           +  R 
Sbjct: 1   MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +            ++ L E+ + + ++ +  +           +        
Sbjct: 60  YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSP---D 116

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLK 165
              I+ A+  ++     L+     +    +      R  + +  + I G  + V   H  
Sbjct: 117 PRGINIALLYQRDQFFYLRHESIPIRFSGNKH-KLTRDILHVYGKIITGDTLDVFVCHFP 175

Query: 166 SFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
           S    +         +   L   +  L              +I GDFN        ++ F
Sbjct: 176 SRYGGEKESEKDRFDAARTLRGSSDSLL-----LIREKPQILIMGDFNDTPQDRSISEIF 230

Query: 225 WKTIDPND-----------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---- 269
                P +             +           ++K       +D  +++++        
Sbjct: 231 AAQAFPENTQITDSTSCTYYNLFASPYITQFPGSHKYQGEWSQLDQIIVNRDLITQESSM 290

Query: 270 -LIQESFS----------------EILYNEDDIKSRGKRLSDHCPISIDY 302
            +I ES                     +            SDH P+ ID+
Sbjct: 291 HIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLVIDF 340


>gi|254446687|ref|ZP_05060162.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
 gi|198256112|gb|EDY80421.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
          Length = 281

 Score = 99.2 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 91/287 (31%), Gaps = 41/287 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++L+++NI        +    +S +  + +   +    +    DIV LQE+ + +    
Sbjct: 7   EIKLMTFNIAHGRG-LSLYQGFSSARTISKNLDRIAHIIREQQPDIVALQEIDASSHWNG 65

Query: 83  VFPKNTWCIFYSTER---LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                 +    +         H++RD    +    A   K      +            +
Sbjct: 66  HINLLDYLQSATDYPVSIHGIHNRRDGRKPLAYGNAFLSKFPVKDWKVV-----SFGEKK 120

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            G +  +E     +G +I V+++HL               S     +Q   L   I Q+ 
Sbjct: 121 LGEKGFLEACFLADGTEIDVINLHLDF------------RSRRTRLRQVDQLIASIHQRS 168

Query: 200 ESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            +     P +I GDFN   +   ++D   + I+ +     +      R            
Sbjct: 169 LADPYHLPPIICGDFN--TSSRSSSDALHQLIERSAGEEDYHYFPK-RERTFPAHFPSRG 225

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D+ ++                 +  ++ +      SDH P+     
Sbjct: 226 LDFILL--------------AAPFEAENTEVIKSFASDHLPVLSTIS 258


>gi|224024500|ref|ZP_03642866.1| hypothetical protein BACCOPRO_01225 [Bacteroides coprophilus DSM
           18228]
 gi|224017722|gb|EEF75734.1| hypothetical protein BACCOPRO_01225 [Bacteroides coprophilus DSM
           18228]
          Length = 340

 Score = 98.9 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 37/339 (10%), Positives = 87/339 (25%), Gaps = 49/339 (14%)

Query: 1   MI--RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SV 47
           MI  + ++  L  F     +    K R++ +N+  L +    SL  +           + 
Sbjct: 1   MISLKTFLSGLALFCALAPSQAQDKFRVMEYNVENLFDCSHDSLKNDYEFQPDSPRGWTK 60

Query: 48  KRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
            R       + +           D+V L E+ + + V  +   +          +     
Sbjct: 61  ARYYDKLAKIAKVILAAGDKQVPDLVGLCEVENEHCVQDLVKNSPLRDAGYDFAITQS-- 118

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDI 162
              +      + + +        ++ +        R   R  + +   I  G  + V   
Sbjct: 119 --PDERGIDVVLLYQPATFRHLSTHAIGIPSKEIDRRPTRDILHVSGRIVTGDTLDVFVC 176

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           H+ S    +     Y    +   ++A      + Q        ++ GDFN   +     +
Sbjct: 177 HMPSRSGGEKQSEPYRLFTAGYLRRAADSVMAVRQHPN----VIVMGDFNDYPSNRSIAE 232

Query: 223 DFW--KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ-------NAYKFLIQE 273
                +  D  +    +           +       +D  ++                  
Sbjct: 233 VIGAVRPGDQIEKTRLYNLMDGKEGGTYRYRGEWGTLDQMMVSGYLLEGNERIRAKYEDA 292

Query: 274 SFSEILY--------------NEDDIKSRGKRLSDHCPI 298
              +  +                   K      SDH P+
Sbjct: 293 QILKFPFLLEEDDRYGGESPSRTYWGKKYHGGYSDHLPV 331


>gi|119356848|ref|YP_911492.1| endonuclease/exonuclease/phosphatase [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354197|gb|ABL65068.1| Endonuclease/exonuclease/phosphatase [Chlorobium phaeobacteroides
           DSM 266]
          Length = 342

 Score = 98.9 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/350 (11%), Positives = 89/350 (25%), Gaps = 64/350 (18%)

Query: 1   MIRKYVLALVFFLVPCTAS--------VAQKVRLVSWNINTLSE-------QEGVSLWKN 45
           M +      +F  V    +            + ++ WN   L +        +     + 
Sbjct: 1   MKKTLSTVFLFLSVILFTAFSSSAKAGAGDSLLVMWWNAENLFDSINDPAVDDDDFTPEG 60

Query: 46  SVKRTTSDYT----LLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFY 93
             + T          ++     ++         DI+   E  +    AK        +  
Sbjct: 61  KFRWTEKKLQLKLMRVQHLFNAINSHPQYSAYPDIIAFAETENKKVFAKAIG-----VIK 115

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           S    + + +      I   +A   + V         +   D      +R  +     + 
Sbjct: 116 SGGYKMVYHESGDPRGIDIGLAFNSRKVVFKASKAYQIPVDD----KPSRPVIVAEFSVF 171

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSP-SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
                ++  H  S  F           + +++   A  L       K S    +I GDFN
Sbjct: 172 SHPFHIVLNHWPSRAFDIRWTEPKRIGAATVVRHIADSLLQ-----KNSKADIIIMGDFN 226

Query: 213 RKINYLGNNDDFWKTIDPN------DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
            +            + D +        L            +     +   ID  ++    
Sbjct: 227 DEPENRSLKKVLGSSFDASAVQASRGRLFYNCWADCRGIGSYFYRGHWEKIDQILVSGGL 286

Query: 267 YK----FLIQESFSEILYN------------EDDIKSRGKRLSDHCPISI 300
           +     +L + +F    ++              +        SDH P+ +
Sbjct: 287 FDRKGLWLPENAFHCFAFSGMMDEGGKKLWPTYEKGVYKGGYSDHLPLLL 336


>gi|53802810|ref|YP_115457.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath]
 gi|53756571|gb|AAU90862.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath]
          Length = 256

 Score = 98.9 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  +  ++   ++ +QE    +     
Sbjct: 1   MKIATWNVNSL----------------RVRLPQVLDWLDSVQPGVLAVQETKLTDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +    S    +  +AV  K       + P             R
Sbjct: 42  -------FPVEALRAVGYHAVYSGQKTYNGVAVLSKAPVEDVLTDP------PNLDDPQR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + +        + ++++++ +   + S +  Y             ++D+I ++  +  
Sbjct: 89  RILAVTA----GPLRIINLYVPNGSEVGSDKYAYKLD------WLAKVRDFIAEEMAAHP 138

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTI-----------DPNDSLIRFPKEKDSRCNANK 249
             V+ GDFN        +D      K +                L    +  +    +  
Sbjct: 139 HTVVLGDFNIAPEDRDVHDPESWREKILCSTPERDAFRAWAGLGLSDLFRRFEQPEGSFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ +            S        D      +R SDH P+  
Sbjct: 199 WWDYRAAGFRRNLGLRIDHILASLPLAGRCTACSI-------DKTPRSLERPSDHAPVIA 251

Query: 301 DYD 303
           ++D
Sbjct: 252 EFD 254


>gi|88807632|ref|ZP_01123144.1| exodeoxyribonuclease III [Synechococcus sp. WH 7805]
 gi|88788846|gb|EAR20001.1| exodeoxyribonuclease III [Synechococcus sp. WH 7805]
          Length = 276

 Score = 98.9 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 85/304 (27%), Gaps = 67/304 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWN+N                   +    +  +      D++ LQE    N +     
Sbjct: 3   IASWNVN----------------SVRTRLGHVLSWLDRHTIDVLALQETKVDNPL----- 41

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                      R   +         +  +A+  +   +      L G     + A    A
Sbjct: 42  -----FPLEPFRERGYDVSIHGQKSYNGVALISRQP-LEDVRLGLTGELPGDADAEALGA 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + ++      + V+++++ +   L S + +Y             L+ ++   +    P 
Sbjct: 96  QKRVISALVDGVRVVNLYVPNGSSLRSEKYSYK------LNWLGCLERYLRSAEARDEPL 149

Query: 206 VIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNANK 249
            + GDFN        +D                   + +  N       +  +       
Sbjct: 150 CVVGDFNIGPEARDLHDPDRLTGGIMASEAEREALHQVLGSNLG--DAFRLFEPGSGHWS 207

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+  + ++  +     S        D  +   ++ SDH P+ +
Sbjct: 208 WWDYRSGAWNRDSGWRIDHIYLSRDLQELARSCSI-------DKQERGREQPSDHAPVMV 260

Query: 301 DYDF 304
           D  +
Sbjct: 261 DLAW 264


>gi|317051122|ref|YP_004112238.1| endonuclease/exonuclease/phosphatase [Desulfurispirillum indicum
           S5]
 gi|316946206|gb|ADU65682.1| Endonuclease/exonuclease/phosphatase [Desulfurispirillum indicum
           S5]
          Length = 554

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 90/296 (30%), Gaps = 28/296 (9%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+       G     N  +       LL      LDAD+V L EM ++      
Sbjct: 271 LRVATFNMENYFVTPGRRGASNQRELQRQRSRLLAA-FHGLDADVVALMEMENHPRA--- 326

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  + S  +  +   R        + A++   +   ++   L+G          R
Sbjct: 327 --LQDWQQWVSRTQSDSREYRVIAGPDPGSDAIQV-VLVYDRKRLELMGVDSLVDGVFQR 383

Query: 144 RAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQAQWLKDWITQK 198
             V       G  ++  V+ +H KS     +  +            +QQA+ L   +   
Sbjct: 384 HPVVGHFRDRGSDQRFSVIGVHFKSKTRCPAEGDVDLGQGCWNLQRTQQARMLLQQL--G 441

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +   F+IAGD N      G  D      +          ++ ++            +D
Sbjct: 442 SPAESRFLIAGDLNA----YGREDPVRLLQEAGMVNSLGAFDRQTQNYTYIFFGQSGTLD 497

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------KRLSDHCPISIDYDF 304
           Y                  I  +E    S             R SDH P+  D+ F
Sbjct: 498 YIFRSSALNDLARGGGIWHINVDEPPFLSYQNPQHSRSDEPWRSSDHDPVWADFAF 553


>gi|153832474|ref|ZP_01985141.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01]
 gi|148871269|gb|EDL70141.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01]
          Length = 442

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 90/291 (30%), Gaps = 36/291 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++LV++NI  L                   Y L+ +Y K    D+V LQE+ +    A
Sbjct: 176 QHLKLVTYNIWALPAVASHIGD---------RYELIPEYVKGY--DVVALQEVFADGREA 224

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +        + +     +     + +D    I  R   V   Q  +P   + D F+   
Sbjct: 225 FLRELAEEYPYQTKMLDKD---GFNIHDGGVTIVSRYPIVNQAQYVFPDCSSTDCFADK- 280

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +   G+   V   H  S     S             +Q + +   +     +
Sbjct: 281 --GINYAEIIKGGQAYHVFATHAAS-----SDTEIAREHRQRQFKQMRAMAKSLN--IPA 331

Query: 202 LVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------- 251
               V +GDFN   + + G+       +   +    +     S  +   N          
Sbjct: 332 NETVVYSGDFNVNKLKFPGDYQQMIANLSAVEPE--YSGYTASTFDPRINNFAGKALSGG 389

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N   +DY ++          ++  ++  +      +   LSDH P+S   
Sbjct: 390 DNVEYLDYVMVSSEYGAKSFNDNRVDVPRSTAASLWKHYNLSDHFPVSTVL 440


>gi|283785027|ref|YP_003364892.1| exodeoxyribonuclease III [Citrobacter rodentium ICC168]
 gi|282948481|emb|CBG88070.1| exodeoxyribonuclease III [Citrobacter rodentium ICC168]
          Length = 268

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 83/311 (26%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEDVARLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAELPSPLGNVTVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLDSELKRDN 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N   +                           +   + ++    +  F    
Sbjct: 145 PVLIMGDMNISPSDRDIGIGEENRRRWLRTGKCSFLPEEREWMDRLLN-WGLVDTFRHAH 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  Q   +  ++          D      ++ 
Sbjct: 204 PETNDKFSWFDYRSKGFDDNRGLRIDLLLASQPLAERCVETGI-------DYAIRGMEKP 256

Query: 293 SDHCPISIDYD 303
           SDH P+   +D
Sbjct: 257 SDHAPVWAKFD 267


>gi|113867383|ref|YP_725872.1| exonuclease III [Ralstonia eutropha H16]
 gi|113526159|emb|CAJ92504.1| Exonuclease III [Ralstonia eutropha H16]
          Length = 276

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 85/317 (26%), Gaps = 69/317 (21%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFL 71
           +       +  +R+ SWN+N+L              R       L +  +     D + L
Sbjct: 1   MSAAALPASGPLRIASWNVNSL------------KVRLPQVLQWLAEQDQTGAPIDALCL 48

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+          P + +    +           +    +  +A+         +   + 
Sbjct: 49  QELK--------LPDDKYP--LAELENAGFHSIYTGQKTYNGVAIL-------ARDASMP 91

Query: 132 GAKDSFSRAGN-RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           G  D          A + ++      + ++  +  +    DS +  Y        +    
Sbjct: 92  GPADVVRNIPGFEDAQQRVIAATYGDLRLVCAYFPNGQAPDSDKFVYK------LKWLDA 145

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLI 235
           +  W+ ++ +      + GDFN        +D                 +  +       
Sbjct: 146 MTAWLREEMKRYPKLALLGDFNIAPEDRDVHDPKKWEGQNLVSPQERAAFAALVELGLAD 205

Query: 236 RFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            F ++ +    A      ++          ID+ ++                    D + 
Sbjct: 206 AF-RQFEQPEKAFSWWDYRMMAFRRNAGLRIDHILLSPALTSGCSACVI-------DRVP 257

Query: 287 SRGKRLSDHCPISIDYD 303
              ++ SDH P+     
Sbjct: 258 RTWEQPSDHTPVVATLS 274


>gi|118470089|ref|YP_886033.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155]
 gi|118171376|gb|ABK72272.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155]
          Length = 273

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 86/309 (27%), Gaps = 62/309 (20%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  Q + + + N+N               +R+T +  +L  + K   AD++ +QE     
Sbjct: 2   ASPQTLTVTTINVNGARA--------ACKERSTENLGMLA-WLKQTRADVICMQETRCE- 51

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                        F     L +             +AV  +      +        D+  
Sbjct: 52  --DDQLAATFETAFADGWHLASAPSE---RKGRNGVAVLSRTPFDDIRIGCGAEEFDTHG 106

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R          +E++   I V+ +++ +       +       + +S++   L+      
Sbjct: 107 RW---------IEVDTAGITVVSVYVPTGEAETERQLEKERFMAGVSKRMAQLQA----- 152

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDS 243
                  ++ GD+N         +                    +  +  +    +    
Sbjct: 153 --GDREALVCGDWNIGHTENDIKNWKGNVKKSGFLPEERAWVSGLLASGWVDAVRQLHGD 210

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           IDY ++       L+           +  ++   R SD
Sbjct: 211 VPGPYSWWSWRGKAFDNDAGWRIDYHLVTPGLAGRLVAGG-------TERPEAYALRWSD 263

Query: 295 HCPISIDYD 303
           H P+++++ 
Sbjct: 264 HAPVTVEFS 272


>gi|330998076|ref|ZP_08321904.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella
           xylaniphila YIT 11841]
 gi|329569165|gb|EGG50956.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella
           xylaniphila YIT 11841]
          Length = 336

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 94/320 (29%), Gaps = 48/320 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLD----A 66
           Q  R++ +N+  L +    SL ++              R       L +    +      
Sbjct: 24  QPFRVMFYNVENLFDCRHDSLKEDREFLPGGEKKWTPSRYWRKLDALSKVVAAVGEERLP 83

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V L E+ + + +   F         +       +       I  A+  +  + R+L+ 
Sbjct: 84  DLVGLCEVENDSVL---FDLTRRSSLRALGYRYVATHSPDVRGIDVALLYQPGSFRLLES 140

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
               + + D+  R   R  + +   + +G  + VL  HL S      +   +    +   
Sbjct: 141 REITVPSVDAGFR-PTRNVLYVKGRVLSGDTLHVLVCHLPSRLGATRVSRRHRMLAART- 198

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                + D I          V+ GDFN         + F       +       E     
Sbjct: 199 --VSAVADSIRTVVG-DARIVVMGDFNAGSEDEVFLEAFIPYFHEPELAFSRQSEVKG-- 253

Query: 246 NANKNLRNKIPIDYFVMDQ----NAYKFLIQESFS-----------------EILYNEDD 284
            + +       ID+ ++      N+  F   +                       +    
Sbjct: 254 -SYRYRGIWETIDHILVSPVLMDNSRPFHTSDGCRAIVAFPFMCEREKTYGGVRPFRTYQ 312

Query: 285 IKSRGKRLSDHCPISIDYDF 304
                   SDH P+++D+++
Sbjct: 313 GPLYKGGYSDHFPVTLDFEW 332


>gi|134096852|ref|YP_001102513.1| putative large secreted protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|291005103|ref|ZP_06563076.1| putative large secreted protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|133909475|emb|CAL99587.1| putative large secreted protein [Saccharopolyspora erythraea NRRL
           2338]
          Length = 602

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/329 (10%), Positives = 79/329 (24%), Gaps = 69/329 (20%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSY 77
              ++ + ++N+  L+  +             + +  L Q         D+V L+E+   
Sbjct: 295 AEDELAVATYNVENLAADDD-----------QAKFDRLAQGIAGNLASPDVVALEEVQDN 343

Query: 78  NAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                                          +   +        +   +I  A       
Sbjct: 344 TGAEDDGVVAADQTLRRFTDAIAAAGGPRYEWRQIDPQNGADGGEPGGNIRVAFLFDPAR 403

Query: 121 VRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
           V    +                       P      + +   +R+ +       G++++V
Sbjct: 404 VSFNDRPGGDATTPVRPVADGGGAALSVSPGRIDPANAAWENSRKPLVGEFTFRGQRVFV 463

Query: 160 LDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNR 213
           +  H  S      L   + P    S      QA+ ++ +  Q    +     V+AGD N 
Sbjct: 464 VANHFNSKGGDQPLHGRFQPPVRGSEEQREAQAKAVRAFADQLRAVDDQARIVVAGDLND 523

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                               +        +   +     N   +D+ +    A       
Sbjct: 524 FGFSPVVRTLTA----DGALVDAAEGLPPAERYSYVYEGNSQALDHILTSPAAG------ 573

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +              + SDH P  +  
Sbjct: 574 --TADYDVVHVNAEFADQASDHDPQIVRL 600


>gi|304320634|ref|YP_003854277.1| extracellular nuclease [Parvularcula bermudensis HTCC2503]
 gi|303299536|gb|ADM09135.1| extracellular nuclease [Parvularcula bermudensis HTCC2503]
          Length = 1471

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 90/356 (25%), Gaps = 74/356 (20%)

Query: 17   TASVAQKVRLVSWNINTLSEQEGVSLWK-----------NSVKRTTSDYTLLRQYAKNLD 65
               V   + + ++N+         +              ++          L Q      
Sbjct: 745  APDVGGDLTVATFNVLNFFTTLDQNGNTSGPSNLEPRGADNQAEFDRQLDKLVQAIGQSG 804

Query: 66   ADIVFLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
            ADI+ L E+ +                 +A+   FP  T+            S  D ++ 
Sbjct: 805  ADILSLVELENEFADTNGDGQFAIGTLVDALNTAFPTETYAYV-----DPGQSFVDVSDA 859

Query: 110  IHTAIAVRKKNV---------RVLQQSYPLLGAKDSFSRAG----NRRAVELLVE--ING 154
            I      +   V          +     P LG             NR A+    E    G
Sbjct: 860  ISVGFIYKTDKVQLAEGTTVEILSDADLPGLGLSFGQPVFDGVSTNRAALAATFEEIDGG 919

Query: 155  KKIWVLDIHLKSFCFLDSLENTYSPS-----CSLLSQQAQWLKDWITQKKES--LVPFVI 207
             ++ ++  H KS     S  +                 A  L  W+     S      +I
Sbjct: 920  GQVTLVANHFKSKGGSGSGGDADQGDGAGAFNQTRLNAAIALDAWLATDPTSSGDADVMI 979

Query: 208  AGDFNRKINYLGN---NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
             GD N            +  +  +  + +   +              +    +DY   + 
Sbjct: 980  LGDLNAYAMEDPIAYLKNAGFTDLVDSLADTDYTYGFPVDLGIVPQAQGYGTLDYAFANA 1039

Query: 265  NAYKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303
            +    ++  +   I  +E  +                      R SDH P+ I  +
Sbjct: 1040 SLLSQVVDAAVWHINADEPPVIDYDLDFKPTEQEAYFDPSTPFRSSDHDPVLIGLN 1095


>gi|86357443|ref|YP_469335.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
 gi|86281545|gb|ABC90608.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
          Length = 263

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 96/306 (31%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+ D DIV LQE+ +   + + 
Sbjct: 1   MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  K               D  +R    
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKTSPFEVNRGLPGDPLDEQARF--- 91

Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +E +  +   +I  V  I+L +   +D+ +  Y  +        + L+ +  ++    
Sbjct: 92  --LEAVFTLPDTRILRVCCIYLPNGNPVDTEKYPYKLA------WMERLRSFAAERLAYE 143

Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247
              V+AGD+N         D                 ++ ++ N  L    +        
Sbjct: 144 EMLVLAGDYNVIPEPHDCFDPRAWESDALFLPQTRRAFRRLE-NLGLTDAVRATTDATRL 202

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   +   +  + +          ++ SDH P+
Sbjct: 203 YSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPV 255

Query: 299 SIDYDF 304
              +DF
Sbjct: 256 IAYFDF 261


>gi|325203504|gb|ADY98957.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240355]
          Length = 256

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHIVL-----PALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDV-------RVDLETRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|134295849|ref|YP_001119584.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
 gi|134139006|gb|ABO54749.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
          Length = 284

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 86/307 (28%), Gaps = 50/307 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +RL+ WNI    + +GV      + RT +    L  +      D++ LQE+         
Sbjct: 1   MRLIDWNIQWGRDADGVVD----LPRTVAAARRLGDF------DVLCLQEVTRGFGALPG 50

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +  A++                  +            A+  +          L   
Sbjct: 51  GPGPDQFAELAALLPGYTIVDAIGADLPALEPGAPRRQFGNAIATRLPVGRVLRQLLPWP 110

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            D+ + +  R A+E+ +      + V+  HL+ +            +     ++A    D
Sbjct: 111 ADADAPSMPRVALEVELLAPSGPVRVVTTHLEFYSARQ--RLAQVDALRARHREACAHAD 168

Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                + +  PF         ++ GDFN   +            D    +  +      R
Sbjct: 169 HPAPAENATGPFSATAQPRDAIVCGDFNSAFDSDAYRRMLEPIADAPSFVDAWVARHPGR 228

Query: 245 CNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                             +  D+  + +     + +                  R SDH 
Sbjct: 229 TPPPTAGVYDTVQWSDGPLACDFVFVTETLLPRVTRCEI-----------DGDVRASDHQ 277

Query: 297 PISIDYD 303
           P+ ++ D
Sbjct: 278 PVVLELD 284


>gi|257059551|ref|YP_003137439.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8802]
 gi|256589717|gb|ACV00604.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8802]
          Length = 1148

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 86/322 (26%), Gaps = 38/322 (11%)

Query: 15   PCTAS-VAQKVRLVSWNINTLSEQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIV 69
            P T   V   +++ ++N+         +        +          L      +DADI 
Sbjct: 699  PTTPPDVGGSLKVANFNVLNYFTTIDDAFNDARGADSISEFQRQQDKLVTALLEIDADIF 758

Query: 70   FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV-RVLQQS 127
             L E+ +   +A     N      +       +      D I   +  +   V  V   +
Sbjct: 759  GLVELENNGDIAISNLVNVLNSETAPGTYDYIATGTIGTDAIKVGLIYKTSAVNPVGDYA 818

Query: 128  YPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCS--- 182
                    +F    NR  +    +    G+K+ V   H KS                   
Sbjct: 819  ILDSSVDPTFQDDLNRPVLAQTFQQIDTGEKVTVAVNHFKSKGTSGLTNTNDPNYDQGDG 878

Query: 183  ------LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                    +  A  L +W+     +     ++I GD N               I      
Sbjct: 879  QGFWNATRTDAANALVNWLATDPTNSGDSDYLIIGDLNSYAMEDPI-----TAIKNAGYT 933

Query: 235  IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----- 289
                +   +   +         +D+ + + +    +   +   I  +E ++         
Sbjct: 934  NLIEQFSGADAYSYVFDGQFGYLDHALSNSSLTSQVTGVAEWHINADEPNVFDYNEEFNP 993

Query: 290  --------KRLSDHCPISIDYD 303
                     R SDH P+ I  +
Sbjct: 994  PSLYSVDPYRTSDHDPVIIGLN 1015


>gi|330503248|ref|YP_004380117.1| exonuclease III [Pseudomonas mendocina NK-01]
 gi|328917534|gb|AEB58365.1| exonuclease III [Pseudomonas mendocina NK-01]
          Length = 270

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+   +    D++ LQE        + 
Sbjct: 1   MKIVSFNINGL----------------RARPHQLQALIEKHQPDVIGLQE---TKVADEQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +  R + +         H  +A+  +   +        G       +  R
Sbjct: 42  FPE-------AEIRQLGYHVHYHGQKGHYGVALLSRQEPLSLHK----GFPGDGEDSQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + +G  I V++       F       +        +    L+  + ++ +   
Sbjct: 91  FIYGTFADASGNPITVMN-----GYFPQGESRDHPVKFPAKQRFYADLQQLLVERFDPQQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++L    ++  T+     +  F     
Sbjct: 146 ALVVMGDINISPEDCDIGIGEPNRLRWLKTGKCSFLPEEREWLATLKSWGLVDSFRHLNP 205

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +  Q                  D       +
Sbjct: 206 EVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQQLQARFKDAGI-------DYDLRGMDK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++ +
Sbjct: 259 PSDHAPIWLELN 270


>gi|218548682|ref|YP_002382473.1| exonuclease III [Escherichia fergusonii ATCC 35469]
 gi|218356223|emb|CAQ88840.1| exonuclease III [Escherichia fergusonii ATCC 35469]
 gi|324113497|gb|EGC07472.1| exodeoxyribonuclease III [Escherichia fergusonii B253]
          Length = 268

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|33593125|ref|NP_880769.1| putative exodeoxyribonuclease III [Bordetella pertussis Tohama I]
 gi|33563500|emb|CAE42388.1| putative exodeoxyribonuclease III [Bordetella pertussis Tohama I]
 gi|332382537|gb|AEE67384.1| putative exodeoxyribonuclease III [Bordetella pertussis CS]
          Length = 260

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 82/305 (26%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L+                     +  +      D + +QE+   +     
Sbjct: 1   MKLATWNVNSLN----------------VRLPQVLDWLAANPVDALCIQELKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    +    +  +A+  +        + L+     +     R
Sbjct: 41  ------KFPLDAFTEAGYHAAWAGQKTYNGVAIISREP-----GFALVRNNPRYEDPQQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + +      + V+  +  +   +DS +  Y  +          L+DW+ ++  +  
Sbjct: 90  -ILAVTLPSPAGDVRVICAYCPNGQSVDSDKYVYKLA------WFDGLRDWLEEEMRTYP 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              I GD+N                           ++ +     L    +  +    + 
Sbjct: 143 RLAILGDYNVAPADADVHNPEKWEGQVLVSEPERAAFRALLDLG-LTDSFRLFEQPEKSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++        +           D      ++ SDH P+ 
Sbjct: 202 SWWDYRQFAFRRNAGLRIDHVLLSDALKPHCVACVI-------DKAPRANEQPSDHAPVI 254

Query: 300 IDYDF 304
               F
Sbjct: 255 ATLAF 259


>gi|189466708|ref|ZP_03015493.1| hypothetical protein BACINT_03083 [Bacteroides intestinalis DSM
           17393]
 gi|189434972|gb|EDV03957.1| hypothetical protein BACINT_03083 [Bacteroides intestinalis DSM
           17393]
          Length = 353

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 86/328 (26%), Gaps = 55/328 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD----AD 67
             R+VS+N+  L +    +L  +              +       + +            
Sbjct: 29  SFRVVSYNVENLFDCRHDTLKNDYEFLPDAVRHWNYTKYKKKLDNIARTITAAGGWTPPA 88

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQ 126
           +V L E+ + + +  +  ++          + N   +     I  A+   R +   +  Q
Sbjct: 89  LVALCEVENDSVLRDLTQRSVLREAGYRYVMTNSPDQ---RGIDVALLYQRDRFKLISYQ 145

Query: 127 SYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
             P+            R  + +  + +N   + V  +HL S          Y    +   
Sbjct: 146 GIPIPHISGKKKLRPTRDILHVCGMLLNHDTLDVFVVHLPSRSGGAKESEPYRLHAAR-- 203

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--------IDPNDSLIRF 237
            Q +   D I   +      +I GDFN   +    +              + P       
Sbjct: 204 -QLKAAADSIYLHRYHPQ-ILIMGDFNDYPDNASVSKIVSAKAPLQDKSSLQPQRFYHLL 261

Query: 238 PK--EKDSRCNANKNLRNKIPIDYFVMDQNAYK--------FLIQESFS----------- 276
            +         + K       +D+ ++     +            + F            
Sbjct: 262 ARKAATQKDFGSYKYQGEWGLLDHIIVSGTLLQPDADFCTSESKADIFRPSFLLTDDKKY 321

Query: 277 --EILYNEDDIKSRGKRLSDHCPISIDY 302
                +            SDH P+  D+
Sbjct: 322 GGVQPFRTYYGMKYQNGYSDHLPVWADF 349


>gi|150009697|ref|YP_001304440.1| hypothetical protein BDI_3112 [Parabacteroides distasonis ATCC
           8503]
 gi|255013008|ref|ZP_05285134.1| hypothetical protein B2_03828 [Bacteroides sp. 2_1_7]
 gi|298374104|ref|ZP_06984062.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|149938121|gb|ABR44818.1| conserved hypothetical protein with
           endonuclease/exonuclease/phosphatase family domain
           [Parabacteroides distasonis ATCC 8503]
 gi|298268472|gb|EFI10127.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 280

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 92/316 (29%), Gaps = 49/316 (15%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +R  ++  +     C     Q+   + + S+N+   +E +    W +             
Sbjct: 1   MRNLIIVFISLFTFCIGISGQQKCKLNVGSFNLRYDNEGDKDDSWVHRKDMA-------V 53

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                 D D+  +QE   +  V ++   +T+            +        H A+  +K
Sbjct: 54  SLVHFHDFDVFGIQEGLIHQ-VKELVKDDTYTYVGVGRDDGKEAGE------HAAVLFKK 106

Query: 119 KNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171
              ++L      L          +     R      ++  ++GK+ +   +H     F  
Sbjct: 107 DRFKLLDSGNYWLSETQDKPSFGWDAQCRRVCSWAKLKDKVSGKEFYFFSVH-----FDH 161

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TID 229
             +     S  ++    + +            P +  GDFN   +             +D
Sbjct: 162 IGKVARHESALIMLANIKKIA--------GDSPAICVGDFNGTPDSEPIQILKSDGLLLD 213

Query: 230 PNDSLIRFPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
             +     P       N    N   K  IDY  + +               Y   +    
Sbjct: 214 SREISKTPPYGTVGTTNQFNLNAPMKNRIDYIFVTK---------GIQVNKYGTLNECQY 264

Query: 289 GKRLSDHCPISIDYDF 304
           G   SDH PI I+ +F
Sbjct: 265 GHFSSDHFPIMIEAEF 280


>gi|119471476|ref|ZP_01613917.1| hypothetical protein ATW7_16665 [Alteromonadales bacterium TW-7]
 gi|119445575|gb|EAW26860.1| hypothetical protein ATW7_16665 [Alteromonadales bacterium TW-7]
          Length = 910

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 88/317 (27%), Gaps = 41/317 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDADIVFLQEMGS 76
            +R+ S+N+      +G      + +              L      + AD+V L E+ +
Sbjct: 461 DLRVASFNVLNYFNGDGQGAGFPTSRGADSLEELVRQEAKLVSAISAMQADVVGLMEIEN 520

Query: 77  Y-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                 +A+A +          +    ++ +      D  T   + + N      S  + 
Sbjct: 521 DGFGEFSAIASLVNALNDADSANEYAFVDFNVNQVGTDAITTALIYRANKVEEVGSAAIT 580

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLSQQAQ 189
            A           A       + +   V   HLKS   C   S  N           + +
Sbjct: 581 TAAPFDFSNRTPIAQSFKSLESQEVFTVAVAHLKSKGGCGSASGANEDQNDGQACWNEIR 640

Query: 190 -----WLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                   DW+  K         ++ GD N         D   K  +     +    + +
Sbjct: 641 TEGASAFADWLDSKPTGVDDEDIILVGDMNA----YAMEDPIRKFDEKGYKNVVAELDGN 696

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------- 289
           +   +         +D+ V  ++    ++      I  +E  +                 
Sbjct: 697 TLAYSYSFSGRAGSLDHAVATESLLSKVVAAKDWHINADEPIVLDYNVEFKSEGHQSTLY 756

Query: 290 ----KRLSDHCPISIDY 302
                R SDH P+ +D 
Sbjct: 757 SESAYRASDHDPVIVDI 773


>gi|241831529|ref|XP_002414867.1| glucose-repressible alcohol dehydrogenase, putative [Ixodes
           scapularis]
 gi|215509079|gb|EEC18532.1| glucose-repressible alcohol dehydrogenase, putative [Ixodes
           scapularis]
          Length = 368

 Score = 98.9 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 95/298 (31%), Gaps = 22/298 (7%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
                + VR++ WN+    L+EQ +G +   ++    +     + +   + + D++ LQE
Sbjct: 58  AQPGPETVRVLQWNLLSQALAEQADGFACCPDAALDWSKRRWRILEEVLSYEPDLICLQE 117

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +  Y  +        +   +  +           N+     A+     +           
Sbjct: 118 VDHYKFLRASLGSVGFGGTFFPKPDSPCCYV-RGNNGPDGCAIFYDKAKFELVRCEKRVL 176

Query: 134 KDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +    ++     + +   +++  ++ ++  HLK+               SL ++Q + L 
Sbjct: 177 EVFTCQSNQVTLLCVFRRKLDDAELCLVTTHLKARQGG--------LLSSLRNEQGKDLL 228

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPK-EKDSRCNANKN 250
           D++   +    P +IAGDFN +            + +    S    P   +  +      
Sbjct: 229 DFVQNHRGR-RPTIIAGDFNAEPTEPVYKTLLAQRDLSLESSYALQPGSGRREQEPPYTT 287

Query: 251 LRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +        IDY    +  +    +  F                 SDH  +  D 
Sbjct: 288 WKIREDGEVRHTIDYIFFSKADFSLEARLDFPTEDQIGPGRVPSLAYASDHFSLVADL 345


>gi|319795420|ref|YP_004157060.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS]
 gi|315597883|gb|ADU38949.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS]
          Length = 274

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 86/285 (30%), Gaps = 49/285 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ ++NI+           +        +   L    + LDADIV LQE+   +  A A
Sbjct: 31  LRVATYNIH--------KGVQGIGPARRLEIHNLGHAIEQLDADIVCLQEVRKMNRQAAA 82

Query: 82  KVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +                     +             A+  +   +      +     S  
Sbjct: 83  RFARWPELPQADFLAPEGYTAVYETNAVTRHGEHGNALLTRWPVIRTGHQDI-----SDH 137

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R   R  + +++E+ G+ +  + +HL                     +Q   L+++I ++
Sbjct: 138 RFEQRGLLHVVIEVEGQPVHAIVVHLGLIKGS-------------RVRQIARLREFIDRE 184

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    V+AGDFN             +       L      +  R     +      +D
Sbjct: 185 VPAHEAVVVAGDFNDWGAR-------MRYAMNAMGLRDASDLRGPRTLTYPSRLPVAQLD 237

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +        + L   S +              R+SDH P+  D+ 
Sbjct: 238 FVY-----GRKLEPLSCTVPRGPI------WARMSDHLPLVADFS 271


>gi|118475423|ref|YP_891999.1| endonuclease/exonuclease/phosphatase, putative [Campylobacter fetus
           subsp. fetus 82-40]
 gi|118414649|gb|ABK83069.1| endonuclease/exonuclease/phosphatase, putative [Campylobacter fetus
           subsp. fetus 82-40]
          Length = 431

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 87/308 (28%), Gaps = 56/308 (18%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQE-------GVSLWKNSVKRTTSDYTLLR 58
           VL L+F  +   ++   ++++ ++N+  L +                +  +       + 
Sbjct: 3   VLILLFIAIFSISA---ELKIATYNVENLFDDNIDGSEYKDFKDGTWNTAKYIQKLNNIS 59

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +  K LDAD + + E+ + + + ++  K+ +  +                     + V  
Sbjct: 60  RVIKALDADFISVLEIENSSVLKQLAMKSGYKFYEFATNKNAP----------VGLGVMS 109

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +  +   +            R  +   +   G+ I     H  +            
Sbjct: 110 KYPILSSRKIVIP-------NLKTRPILVSEISFGGETIKFFSTHFPA----------AK 152

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S       A  +   +  +K S    +I GD N    Y    +D           +   
Sbjct: 153 NSLKDRKTAANTMIKAVENEKNS----IILGDLNSNYGYGFLLNDLNGEFKNLWEFV--- 205

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDH 295
                      + +    ID+ ++  + +         SF     +         + SDH
Sbjct: 206 -----GNRDRSSYKKGGAIDHIMLQNSFFNGNIRYKNSSFGVFKPSFLSSG----KFSDH 256

Query: 296 CPISIDYD 303
             I     
Sbjct: 257 YAIYAVLT 264


>gi|312130846|ref|YP_003998186.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
 gi|311907392|gb|ADQ17833.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
          Length = 600

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 93/323 (28%), Gaps = 48/323 (14%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADIVFLQ 72
                + + ++N+      +G      + +                       AD+V L 
Sbjct: 281 PKGTNLTVAAFNVLNYFNGDGKGGGFPTERGASSLEELKRQQDKTVNVILASGADVVTLM 340

Query: 73  EMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           E+ +      +A+  +          + + +   +     + I +A+    K V+ +   
Sbjct: 341 EIENDGFDEHSAIQTLIKALNEKSGGTRQFVACENPDRGWDAIVSALLYDSKKVQPVGAM 400

Query: 128 YPLLGAKDS-FSRAGNRRAVELLVEI--NGKKIWVLDIHLKS------FCFLDSLENTYS 178
             +     S    +  R+ V          +   V+ +H KS          + L +   
Sbjct: 401 VTMPDGYGSASFDSTRRKPVIQTFSTLKENEVFTVVGVHFKSKGVQSPGEGNEDLLDGQG 460

Query: 179 PSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            +  L  QQA+ LK+W+  +        +++ GDFN               +D       
Sbjct: 461 RNNKLRVQQAEDLKNWLATRPTGTDDPDYILMGDFNSYAMEDP-----LIYLDEQGYHPL 515

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------- 289
           FP    +   +         +D+ +        + +     I  +E  +           
Sbjct: 516 FP----ATSYSYVYDGFWGSLDHALATPTMKSQVKKAVKWHINSDEAPVLDYNMEYKSAE 571

Query: 290 ----------KRLSDHCPISIDY 302
                      R SDH PI I  
Sbjct: 572 QIKSYYDASPFRSSDHDPIIIRL 594


>gi|161510986|ref|YP_088240.2| exonuclease III [Mannheimia succiniciproducens MBEL55E]
          Length = 267

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 80/311 (25%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L +  +    DI+ LQE  +       
Sbjct: 1   MKIISFNINGL----------------RARPHQLDKIVEQYQPDIIGLQEIKVADEMFPH 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +++                 H  +A+  K              +D+  R  
Sbjct: 45  ELVDHLGYHVYHH------------GQKGHYGVALLCKQAPKAVHKGFSTDTEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +    E     + V++       F       +        +    L +++  +   
Sbjct: 91  ---LIMADFETAFGALTVVN-----GYFPQGESRDHETKFPAKEKFYADLLNYVKNEHNP 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
               +I GD N                          L    ++++ +        F K 
Sbjct: 143 ESNIIIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWYQRLYECGLEDTFRKL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID+ + +    +  +                  ++
Sbjct: 203 NPWTNDKFSWFDYRSKGFAENRGLRIDHILANSKLAERCVDTGI-------ALDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 256 PSDHAPIWATF 266


>gi|188994745|ref|YP_001928997.1| hypothetical protein PGN_0881 [Porphyromonas gingivalis ATCC 33277]
 gi|188594425|dbj|BAG33400.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 375

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 93/309 (30%), Gaps = 61/309 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MG 75
           ++    +++++++N+     +   S   N           + +Y K   ADIV LQE + 
Sbjct: 106 SSIPQSRIKVMTYNVKGFDFRAHNSEDPNP----------ILKYIKGSGADIVCLQEAVL 155

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           S  + ++     T+  +    R +  S    +    + + +  K   +     P   A +
Sbjct: 156 SRKSNSRYVGLRTFKKYLPEYRYMELSHAREDRKG-SGLMLLSKYPILDVHRIPYESAFN 214

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL------------ 183
                    +    V+I G+K+ V++ HL+SF    +    Y                  
Sbjct: 215 --------GSTAYTVDIQGRKVLVVNNHLESFRLTMADGTEYLKMVREGEAAALSRMMTA 266

Query: 184 --------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                    + QA  +  +I          ++ GDFN        +         +    
Sbjct: 267 KMGPAYALRAVQADSVSHYIRC--SESEHVIVCGDFNDTPISYARHKI------ASGLKD 318

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +                K+ ID+ +       +             +    +    SDH
Sbjct: 319 AYSDTGRGPGFTFNQGAFKVRIDHILYSSGFLAY-------------NCTVDKSVHASDH 365

Query: 296 CPISIDYDF 304
            P+     F
Sbjct: 366 FPVWCYLVF 374


>gi|288941776|ref|YP_003444016.1| exodeoxyribonuclease III [Allochromatium vinosum DSM 180]
 gi|288897148|gb|ADC62984.1| exodeoxyribonuclease III [Allochromatium vinosum DSM 180]
          Length = 278

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 86/312 (27%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN                   +    +      LD DI+ LQE        + 
Sbjct: 2   LKIVSFNING----------------VRARPHQVEALKAGLDPDILALQE---SKVADEQ 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +         R + +  R      H  +A+  K            G  +  + A  R
Sbjct: 43  FPLD-------WARGLGYDVRIHGQKGHYGVALLSKQSPHSVVK----GLPNDDAEAQRR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      +G ++ V++       F       +        Q    L D++        
Sbjct: 92  LILGQYRLADGDEVTVIN-----GYFPQGEGRDHPLKFPAKQQFYAGLLDYLRTAFRPDQ 146

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                         +L    ++++ +     +  +     
Sbjct: 147 NIVLLGDMNVAPLDLDIGIGADNAKRWLRTGKCAFLPEEREWFQALLDWGLIDAYRTRHP 206

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID+ ++     + LI           D       +
Sbjct: 207 ETADRFSWFDYRSRGFEREPKHGLRIDHILISAPLRERLIDVGI-------DYAIRAMDK 259

Query: 292 LSDHCPISIDYD 303
            SDHCP+ I  D
Sbjct: 260 PSDHCPVWITLD 271


>gi|325528671|gb|EGD05753.1| putative extracellular endonuclease/exonuclease/phosphatase
           [Burkholderia sp. TJI49]
          Length = 402

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 91/315 (28%), Gaps = 47/315 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 92  LRVASFNVLNYFNGNGLGGGFDDPNNRGAKNYQEFVRQDAKIVSALKALDADVIGLMEIQ 151

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  S   +   + R   + I  A+    + V       P+  A 
Sbjct: 152 NNGYGELSAVRQLAAKLGDSWRVVDPGTSRLGGDAIAVAMIYDSRKVE------PVGRAA 205

Query: 135 DSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + +   HLKS    D+  +               ++
Sbjct: 206 TLAIDDKNRQPLAQSFRRIGGKQALTIAVNHLKSKNCPDATNDDLDQGDGQGCWNPTRTR 265

Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  L DW+       +    ++ GDFN             + ++         +    +
Sbjct: 266 AAAKLADWLAGTPTGVAGQGVLLIGDFNSYTYEDPI-----RLLESRGYRNLVSRWIGDK 320

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------------- 288
             +         +D+ +        +       I  +E                      
Sbjct: 321 AYSYVYNGEAGYLDHALASLPLASHVKAVHEWHINADEPVALQYTLAYKTAAQQQTYYAP 380

Query: 289 -GKRLSDHCPISIDY 302
              R SDH P+ ID 
Sbjct: 381 DAYRSSDHDPVLIDI 395


>gi|212710738|ref|ZP_03318866.1| hypothetical protein PROVALCAL_01806 [Providencia alcalifaciens DSM
           30120]
 gi|212686435|gb|EEB45963.1| hypothetical protein PROVALCAL_01806 [Providencia alcalifaciens DSM
           30120]
          Length = 270

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 86/310 (27%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L    +    +++ LQE         +
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKHQPEVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP       Y     + +         H  +A+  KN  +  +         +      R
Sbjct: 42  FP-------YEEVSKLGYHVYYHGQKAHYGVALLLKNEPIAVRK-----GFPTDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   ++ N   + V++       F       +        +  + L+D++T  + +  
Sbjct: 90  RIIMADIQTNEGILTVVN-----GYFPQGESRDHPTKFPAKEKFYRDLQDYVTSTQTADS 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N     L                         ++ + +     +  + ++  
Sbjct: 145 QLLIMGDMNISPTDLDIGIGDVNRKRWLKTGKCSFLPEEREWLERLLGWGLVDTYREQHP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  +                  D      ++ S
Sbjct: 205 DTTDRYSWFDYRSKGFDDNRGLRIDLLLASKKLASRCRATGI-------DYDIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH P+  ++D
Sbjct: 258 DHAPVWAEFD 267


>gi|283833419|ref|ZP_06353160.1| exodeoxyribonuclease III [Citrobacter youngae ATCC 29220]
 gi|291071073|gb|EFE09182.1| exodeoxyribonuclease III [Citrobacter youngae ATCC 29220]
          Length = 268

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +         +      R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPNDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       +   Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGSITVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  +     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLLGWGLVDTYRHAWP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            + +       +           ID  +      +   +          D      ++ S
Sbjct: 205 EKNDQFSWFDYRSKGFDDNRGLRIDLLLASNPLAERCEETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWAKF 266


>gi|300917685|ref|ZP_07134334.1| exodeoxyribonuclease III [Escherichia coli MS 115-1]
 gi|300415086|gb|EFJ98396.1| exodeoxyribonuclease III [Escherichia coli MS 115-1]
          Length = 272

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 82/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++   +     +  F  
Sbjct: 146 RDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|256825383|ref|YP_003149343.1| extracellular nuclease [Kytococcus sedentarius DSM 20547]
 gi|256688776|gb|ACV06578.1| predicted extracellular nuclease [Kytococcus sedentarius DSM 20547]
          Length = 802

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/329 (11%), Positives = 79/329 (24%), Gaps = 60/329 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             V + ++N+  LS  +    +     +   +             DIV L+E+   N   
Sbjct: 480 DAVDVATFNVENLSPTDDSGKFAGLADQLVENLN---------SPDIVALEEIQDNNGSQ 530

Query: 82  ------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
                             +      +   +               +I      R     +
Sbjct: 531 NDGTVDSGTTVAKLVDAIEEAGGPRYEAAW-INPEDGADGGQPGGNIRNVFLHRTDVPGL 589

Query: 124 L-----------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                                       P      S +   +R+ +       G+ ++V+
Sbjct: 590 RFVERAGGDATTATTVQERGRWARLSVSPGRINPMSTAWENSRKPLVAEYSYRGRPLFVI 649

Query: 161 DIHLKSFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRK 214
            +H  S    D L   +     PS      QA+ ++ ++            ++AGD N  
Sbjct: 650 GVHFASKGGDDPLFGRWQQPERPSEVQRLAQAREVRGFVDSLLAKDATANVIVAGDVNDF 709

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ-E 273
                 +                 +             N   +D+ ++ +N  +      
Sbjct: 710 EFSPVTDTLVGS--GATALRDLPRELAPQDRYTYNYQGNSQVLDHILLSRNLTESAHPFG 767

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                            +LSDH P  +  
Sbjct: 768 GAPYEHDVVHVNADFHDQLSDHDPQVVSI 796


>gi|86141528|ref|ZP_01060074.1| probable secreted protein [Leeuwenhoekiella blandensis MED217]
 gi|85832087|gb|EAQ50542.1| probable secreted protein [Leeuwenhoekiella blandensis MED217]
          Length = 269

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 50/317 (15%), Positives = 98/317 (30%), Gaps = 61/317 (19%)

Query: 1   MIRKYVLALVFFL-----------VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           M +  +  +  FL                + + +++++S+NI+  +           + +
Sbjct: 1   MTKGIIFKITLFLSSYPMLSQEGSTATFENSSNQLKVLSYNIHHANP---------PMHK 51

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
            + D + + Q  K+ DAD+V LQE+ S              I  +    +   K     +
Sbjct: 52  DSIDLSAIIQVIKDSDADLVALQEIDSDTQ-RSGSGNQAQKIGDALGMQVFFGKSIDFQN 110

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFC 168
               +A+  +   +  + Y L    ++      R     L+++   + IW    HL    
Sbjct: 111 GAYGVAILSRFPIIASKVYKLPSKPETQG--EPRVLALSLIQLPDAQTIWFASTHL---- 164

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                        +    Q   L   +        P ++AGDFN   N            
Sbjct: 165 -------DSQKEDTNRILQIAEL---LNITTNLNQPVLVAGDFNAVANSPVI-------- 206

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
               SL        S C     + N    ID+      ++  L      +  Y       
Sbjct: 207 ---ASLDSVFTRTCSSCPPTIPVENPSKAIDFIAFKPKSFFRLNNHRVIDEHY------- 256

Query: 288 RGKRLSDHCPISIDYDF 304
                SDH P+  ++ +
Sbjct: 257 ----ASDHLPVFANFQW 269


>gi|124267258|ref|YP_001021262.1| exodeoxyribonuclease III [Methylibium petroleiphilum PM1]
 gi|124260033|gb|ABM95027.1| Exodeoxyribonuclease III [Methylibium petroleiphilum PM1]
          Length = 256

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N+L+                     +  +      D + LQE    +     
Sbjct: 1   MRLATWNVNSLA----------------VRLPQVLDWLTANPVDALVLQETKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      ++ +      +  +A+  +       ++ +      F+    R
Sbjct: 41  ------KFPRAEIEAAGYAVQWFGQKTYNGVALLSREP-----AHDVTKNIFGFADEQAR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + V+  +  +    DS + TY  +        Q L+DW+  +  +  
Sbjct: 90  VIAGTV-----DGVRVIGAYFPNGQAPDSEKFTYKMA------WLQALRDWVRSELAAHP 138

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN        +D                 ++ +     +  F +  +    + 
Sbjct: 139 RLVLMGDFNIAPEDRDVHDPVLWAGQIHCTPQEREHFRELIALGLVDAF-RLFEQPPKSW 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++ +     +            D +  + +R SDH P+ 
Sbjct: 198 SWWDYRNLAFRKNQGLRIDHILVSEALRPAVSACMI-------DKLPRKNERPSDHAPVV 250

Query: 300 IDYD 303
           ++  
Sbjct: 251 VELS 254


>gi|320332627|ref|YP_004169338.1| endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM
           21211]
 gi|319753916|gb|ADV65673.1| Endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM
           21211]
          Length = 1242

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 44/318 (13%)

Query: 19  SVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +V   +++   N+ N  +         NS          +    K LDAD+V L E+ + 
Sbjct: 684 AVGGTLKVAGANVLNYFTTFGSNDRGANSAYEFARQKAKIVAALKGLDADVVTLMEIQND 743

Query: 78  NAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +  A           +         + +   + I  A+  +   V ++         +  
Sbjct: 744 SDAALNDLTGALNAAYGQNVYAALSTGKVGTDAIRVAMIYKPARVTLV------GAPRID 797

Query: 137 FSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPSCS--LLSQQAQWL 191
            +   +R  V        +G    V+  H KS     +S +      C   L  QQAQ +
Sbjct: 798 QNSVYSRPPVAQTFRDLSSGGTFTVIANHFKSKGSCPNSGDTDNGQGCWNTLRVQQAQAV 857

Query: 192 KDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             +  Q + S      +I GD N   +         +T+          +       + +
Sbjct: 858 LAFAEQLRASTGDPDVLIMGDLNAYGDEDPI-----RTLVAGGFESLNKRIPAEDRYSYQ 912

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------------- 289
                  +D+ +        +   +   I  +E                           
Sbjct: 913 FSGQFGYLDHALASTALAGQVTGITEWHINSDEPVFLDYNVEFKNNPECKSTTCTTPDLY 972

Query: 290 ----KRLSDHCPISIDYD 303
                R SDH P+ +  +
Sbjct: 973 APTAFRASDHDPVLVGLN 990


>gi|242090413|ref|XP_002441039.1| hypothetical protein SORBIDRAFT_09g019230 [Sorghum bicolor]
 gi|241946324|gb|EES19469.1| hypothetical protein SORBIDRAFT_09g019230 [Sorghum bicolor]
          Length = 393

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 85/322 (26%), Gaps = 36/322 (11%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +   + RLVS+NI      +        ++  +  S    +    K+ DAD++ +QE+
Sbjct: 67  AGAAGYQFRLVSYNILAQVYIKSTFFPHSPSACLKWKSRSKAILTELKSFDADLMCIQEL 126

Query: 75  GSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK--------------- 118
             Y+    K    + +   Y                  +A  V+K               
Sbjct: 127 DEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSAELVQKEGIHYNDLVEKYVPS 186

Query: 119 ----------KNVRVLQQSYPLLGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIH 163
                      +    + + P    +   +    R       +    +++     +L + 
Sbjct: 187 DHVNSAQENNSSTEEDKNAKPDNSKRGDPNDPRVRLKRDCVGLLAAFKLSDPCDHILIVA 246

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
                +     +        L  +    +  I+ K       +IAGDFN        N  
Sbjct: 247 NTHIYWDPEWIDVKLAQAKYLLSRVSQFEQLISNKYNCKPSVIIAGDFNSTPGDKVYNYL 306

Query: 224 FWKTID-PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFSEILY 280
                + P      +          N        +DY  +   +                
Sbjct: 307 VSAGGETPIKLSSLYAANGGEPEYTNYTPGFTGTLDYIFLSDGSSIKPTSLLCLPRGDSE 366

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
           +        +  SDH PI  D+
Sbjct: 367 DVKGGLPNFQHPSDHLPIGADF 388


>gi|190891504|ref|YP_001978046.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
 gi|190696783|gb|ACE90868.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
          Length = 263

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 100/306 (32%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+ D DIV LQE+ +   + + 
Sbjct: 1   MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  K+            A D  +R    
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKSSPSEVNRGLPGDALDEQARF--- 91

Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +E +  +   +I  V  I+L +   +++ +  Y  +        + L+ +  ++    
Sbjct: 92  --LEAVFTLPDTRILRVCCIYLPNGNPVETEKYPYKLA------WMERLRSFAAERLAYE 143

Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              V+AGD+N                   +L    + ++ ++ N  L    +        
Sbjct: 144 EMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREAFRRLE-NLGLTDAVRATTDATRL 202

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   +   +  + +          ++ SDH P+
Sbjct: 203 YSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPV 255

Query: 299 SIDYDF 304
              +DF
Sbjct: 256 IAYFDF 261


>gi|300703904|ref|YP_003745506.1| exodeoxyribonuclease III [Ralstonia solanacearum CFBP2957]
 gi|299071567|emb|CBJ42891.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum CFBP2957]
          Length = 269

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 63/304 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82
           +R+ +WN+N+L              R       L +   +    D++ LQE+   +    
Sbjct: 1   MRVATWNVNSL------------KVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYP 48

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +   +             ++   +    +  +A+  +    + +   ++     F+    
Sbjct: 49  LAELDA----------AGYASLFTGQKTYNGVAILARKA-AMPEGRDVVKNIPGFADEQQ 97

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  V    ++ G  + V+  +  +   LDS +  Y        +    L+DW+  +  + 
Sbjct: 98  R-IVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLKAEMVAH 150

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GDFN   +                       ++ ++    +  F     +    
Sbjct: 151 PRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFDQAD-KL 209

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +         + ID+ ++     +              D +    ++ SDH P+
Sbjct: 210 FSWWDYRLFAFRRNAGLRIDHILLSPELAQRCESCHI-------DRVPRGWEQPSDHTPV 262

Query: 299 SIDY 302
               
Sbjct: 263 VAAL 266


>gi|292490590|ref|YP_003526029.1| exodeoxyribonuclease III Xth [Nitrosococcus halophilus Nc4]
 gi|291579185|gb|ADE13642.1| exodeoxyribonuclease III Xth [Nitrosococcus halophilus Nc4]
          Length = 257

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 85/307 (27%), Gaps = 80/307 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
           K+++ +WN+N+L                      +  + +    DI+ LQE  +      
Sbjct: 3   KLKIATWNVNSL----------------RVRLPQVMDWLEAHQPDILALQETKLSDGEFP 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F    +                S    +  +A+  +      Q    +         
Sbjct: 47  QEAFGDMGYRAA------------YSGQKTYNGVAILCR------QEPQDIMTDLPNLED 88

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR + + +      I +L++++ +   + S +  Y             +KD++ +   
Sbjct: 89  PQRRILGISL----GDIRLLNLYVPNGSEVGSEKYAYKLD------WLARVKDYLQEALA 138

Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                ++ GDFN                         +   + +D         +  +  
Sbjct: 139 EYPKLIVLGDFNVAPGDGDVHNPEIWHETILCSTPEREALGEILDLG--FQDSFRLFEQE 196

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             +      +           ID  ++ +       +          D    R KR SDH
Sbjct: 197 GQSFSWWDYRGGAFRRNWGLRIDLILISKELVPKCTECVI-------DKEPRRLKRPSDH 249

Query: 296 CPISIDY 302
            P+   +
Sbjct: 250 APVIATF 256


>gi|218462948|ref|ZP_03503039.1| putative phosphatase protein [Rhizobium etli Kim 5]
          Length = 288

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 83/322 (25%), Gaps = 79/322 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +   S+NI      +G             D   + +  +   ADI+ LQE+         
Sbjct: 1   MNFASYNIQYGFGLDG-----------RYDLARIARSLER--ADIIALQEVTRGFSRNGF 47

Query: 75  -GSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                 +A  FP + W          E     S             V  +   V  ++  
Sbjct: 48  ADMVAGIAAFFPDHFWVYGPACDLHVEADQGKSAPAPGTRFQFGNMVLSRWPIVSTRTLL 107

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L  ++        R A E ++ + G  I V  +HL                     +Q Q
Sbjct: 108 LPRSRTLGKINPQRGATEAVITVPGGAIRVYSVHLDHVSPD------------ERIRQLQ 155

Query: 190 WLKDWITQKKESL-----------------VPFVIAGDFNRKINYLGN-------NDDFW 225
           +L   I    +                     +VI GDFN +                + 
Sbjct: 156 FLNAHINAFVQEGGSLTGAAEFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAAGGYYG 215

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
           +       +  F   +  R  +           ++ +DY  +       L          
Sbjct: 216 RVARIGTPVDAFATLEAYRPESYSWMDPEDHGKRMHLDYCFVSCGLVSRLKSARI----- 270

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+ ++ 
Sbjct: 271 ------DTQSVGSDHFPLWVEI 286


>gi|254420344|ref|ZP_05034068.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
 gi|196186521|gb|EDX81497.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
          Length = 245

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 78/279 (27%), Gaps = 42/279 (15%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           RL+++N++     +              D   +       +ADIV LQE+    A     
Sbjct: 3   RLLTYNVHRCVGTDK-----------RLDVDRIVAVIGEHEADIVCLQELDVGRARTGKV 51

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +              H             A+   +   L ++  L   +        R 
Sbjct: 52  DQAEAIAEGLAMTSRFHPAMRV-EAELYGDAILTPHPDKLIRADALPTVRGIPG-LEPRG 109

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           A+   ++I G  + VL  HL                      QA  L            P
Sbjct: 110 AIWSEIQIEGVGVNVLTTHLGLVP-------------REQRLQAAALAGD-GWLAGCTGP 155

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++AGDFN   +         + +     L+              +    I ID+  +  
Sbjct: 156 TLLAGDFNAT-SITRPYQTLARRLGDCQRLL----NLKPSVKTFPSGFPAIRIDHCFVSP 210

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        I   + D     +  SDH P+ ID++
Sbjct: 211 EIR----------ITGVKADFSPLARVASDHLPLIIDFE 239


>gi|325923708|ref|ZP_08185327.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
 gi|325545794|gb|EGD17029.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
          Length = 251

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 82/280 (29%), Gaps = 33/280 (11%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +S+N+        V +  +  KR     T +    +    D+   QE+    A       
Sbjct: 1   MSFNVR-------VPVDTDGDKRWEVRRTAMVALIEQAHPDVFGTQELVEEQAQYLAAHL 53

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             +  F    R     +        + +    ++        P +    S++    R A 
Sbjct: 54  PAYRWFGKGRRADGSDEHM-GVFYDSRVLTVVESGDFWLSETPEIPGSSSWNTDLPRMAT 112

Query: 147 ELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
             L E   + ++ ++ + H                  +     A+ +   I     + +P
Sbjct: 113 WALFERRSDKRRFYLFNTHFAH----------RDQDEAAREHSARVILSRIAT-LPADIP 161

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            V+ GDFN   +  G        +    +     +  +           +  ID+ +   
Sbjct: 162 VVVTGDFNSDPDN-GTYRTLTAVLGDARAHATKRQGPEKTFQDFTTHPTR-RIDWILFRG 219

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      +   ++  + +  G   SDH P+  ++ +
Sbjct: 220 ----------LTPTRFSTLETRPGGILPSDHYPVLAEFAW 249


>gi|170768737|ref|ZP_02903190.1| exodeoxyribonuclease III [Escherichia albertii TW07627]
 gi|170122285|gb|EDS91216.1| exodeoxyribonuclease III [Escherichia albertii TW07627]
          Length = 268

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +       +D+      R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPITVRRGFPGDGEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q    L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPTKFPAKAQFYLNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLLSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 ETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|148977573|ref|ZP_01814152.1| exonuclease III [Vibrionales bacterium SWAT-3]
 gi|145963224|gb|EDK28491.1| exonuclease III [Vibrionales bacterium SWAT-3]
          Length = 268

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 83/309 (26%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  Q       +D       R
Sbjct: 42  -------FPIADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDNEDHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+K+ VL+       F       +        +  + L  ++     +  
Sbjct: 91  MIMATFEDENGEKVTVLN-----GYFPQGDNIKHETKYPYKREFYKDLMTYLNDYHNNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ K +     +  F +   
Sbjct: 146 QIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSFQPEEREWLKALMDWGFVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q       +          D      ++ S
Sbjct: 206 EVTDQYSWFDYRSKGFLDNRGLRIDVVLATQKLADKCTEAGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|188588970|ref|YP_001920998.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188499251|gb|ACD52387.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 258

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 96/291 (32%), Gaps = 46/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+           + +   R      L+       + DI+  QE          
Sbjct: 1   MKVMTFNLRCDF-------FLDFNNRWDERKKLVFDVMNKYNCDIIGTQEATEKMFKDIS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA--- 140
               T+ I  +                   I + KK+  +  +++ L    + + R+   
Sbjct: 54  DNIETFNIIGNPRSKKL-------FSERNDILISKKHSIIENKTFWLHDNPEKYGRSRWY 106

Query: 141 --GNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT- 196
               R     +VE+ N K+I + + HL                    + + + L ++I  
Sbjct: 107 SMFPRICTTAIVELKNSKRIRICNSHLDFLLP------------QARAYELKKLSEFIKK 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD----SRCNANKNLR 252
           ++++  +P +I GDFN   N     D     +     +    K+KD    +     KN  
Sbjct: 155 EQEKEDLPLIIMGDFNSNPNSKLIKDFINGDVLNKRLVAVQDKKKDLYNNATMGNFKNKE 214

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               IDY  + +          F  I          GK  SDH P+  + +
Sbjct: 215 KGSHIDYIFVSEE---------FEIIDVEIVKYNVNGKYPSDHYPLMAEIN 256


>gi|319902825|ref|YP_004162553.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319417856|gb|ADV44967.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 345

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/327 (11%), Positives = 93/327 (28%), Gaps = 55/327 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R++S+N+  L + +  SL  +           +  +       + +            
Sbjct: 23  TFRVMSYNVENLFDCKHDSLKNDYEFLPDAVRHWNYAKYRKKLDNIARVIVAAGEWTPPA 82

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V + E+ + + +  +     + +   +      ++      I  A+  ++   ++L   
Sbjct: 83  LVAMCEIENDSVMRDL---TQYSVLRESGYRYVMTQSSDERGIDVALLYQRNCFKLLSSQ 139

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             L+    + SR   R  + +  + +N   + V  +H  S          Y  + +   +
Sbjct: 140 SLLVAKPQNDSR-PTRDILHVCGLLLNKDTLDVFAVHFPSRSGGAKESEIYRITAAKRLK 198

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----- 241
            A      I Q  +     +I GDFN               + P  S    P++      
Sbjct: 199 AAADSLYRIRQHAQ----ILILGDFNDYPTDKSIRQILQAEVPPPASGTLHPRKLYHLLA 254

Query: 242 -----DSRCNANKNLRNKIPIDYFVMDQNAYK--------FLIQESFSE----------- 277
                     + K       +D+ ++  N               + F             
Sbjct: 255 NKAICQKDFGSYKYRGEWGLLDHIIVSGNLLDPNYPLYTSEAKADVFQRPFLLTEDKKYG 314

Query: 278 --ILYNEDDIKSRGKRLSDHCPISIDY 302
               +            SDH P+  ++
Sbjct: 315 GKQPFRTYYGMKYQAGYSDHLPVWTEF 341


>gi|224584182|ref|YP_002637980.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224468709|gb|ACN46539.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 268

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE        ++
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCNN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F +   
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +   +          D      ++ S
Sbjct: 205 QTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|126462083|ref|YP_001043197.1| exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029]
 gi|126103747|gb|ABN76425.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029]
          Length = 259

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 88/302 (29%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  + +  + D+V LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------VKARLEALLAWLEAAEPDVVLLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +                   +A+  +              +D  +R    
Sbjct: 42  FPR-------AAFEDKGWHLETHGQKGFNGVAILSRLPLEDVVRGLPGDPEDVQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V +  + + V  ++L +       +  Y           + +K    +   +  
Sbjct: 92  --IEATV-VGERAVRVCGLYLPNGNPAPGPKYDYK------LGWMERMKARAAELLATEE 142

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                       +   ++ I        F        + +
Sbjct: 143 PVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAFRRILNLGYTEAFRARTFGPGHYS 202

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ ++   A   +            D     G++ SDH P+ +
Sbjct: 203 FWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDV-------RIDREVRSGEKPSDHVPVWV 255

Query: 301 DY 302
           + 
Sbjct: 256 EL 257


>gi|154251594|ref|YP_001412418.1| endonuclease/exonuclease/phosphatase [Parvibaculum lavamentivorans
           DS-1]
 gi|154155544|gb|ABS62761.1| Endonuclease/exonuclease/phosphatase [Parvibaculum lavamentivorans
           DS-1]
          Length = 231

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 75/280 (26%), Gaps = 57/280 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++SWNI+    ++G             D   + +  +  D DIV  QE+ S   +   
Sbjct: 6   LRVLSWNIHGGVGRDGRF-----------DLARIVRLVERHDPDIVAFQEVDSRGRLDGG 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +              +    +     A+  R                  SF     R
Sbjct: 55  APLSILKEALGEHAAEGRTISAPDGHYGHAVISRFPLSGTRVCDL-------SFRSREPR 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+   +E     + ++  HL               S      Q+  L D   +     +
Sbjct: 108 CAISANIETPWGPLRLVTTHLGL-------------SIWERRLQSSMLVDLARE---EKL 151

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GDFN   ++          +         P     +   +        +D     
Sbjct: 152 PCIMMGDFNDWFSFGWVRRRLRAVL---------PSRTMEQTFPSAWPFL--RLDRIYCG 200

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             A               +         +SDH PI  D  
Sbjct: 201 GAAA------------IVKSWTDEGAAPISDHLPIIADIS 228


>gi|300774356|ref|ZP_07084220.1| endonuclease/exonuclease/phosphatase [Chryseobacterium gleum ATCC
           35910]
 gi|300507000|gb|EFK38134.1| endonuclease/exonuclease/phosphatase [Chryseobacterium gleum ATCC
           35910]
          Length = 269

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 78/299 (26%), Gaps = 35/299 (11%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           +VF ++      +Q + ++S+NI    E +  + W    +        +         D 
Sbjct: 1   MVFLMLFALGF-SQDLTVMSFNIRLNVESDKDNAWPKRKQD-------VADLLTYYHPDY 52

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             +QE               +                S     T      K+        
Sbjct: 53  FGVQEALPEQMKDIKAGLKNYDYIGVGRDDGKEKGEFSAIFYDTNRLDVVKSGTFWLSET 112

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           P   +K  +  A NR     + +    K   L ++L    F          S  L+ ++ 
Sbjct: 113 PEKPSK-GWDAALNRICTYAVFKDKKSKKEFLAMNLH---FDHIGNVARVKSSELILKKI 168

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + L           +P  ++GDFN   +               D+      +        
Sbjct: 169 KELN-------PKNLPVTLSGDFNLTDDSEPIKILSQNM---KDTFYHSETKHYGPVGTF 218

Query: 249 KNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    K  IDY        +     S   I     D +      SDH P+ +   
Sbjct: 219 TAFDVNTVPKDRIDYIF-----TQGFTIRSHRHIN----DRRENLLYPSDHFPVIVHLS 268


>gi|117620950|ref|YP_857462.1| exodeoxyribonuclease III [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562357|gb|ABK39305.1| exodeoxyribonuclease III [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 268

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 74/307 (24%), Gaps = 72/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKIISFNINGL----------------RARLHQLKAIIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   V  +         +      R
Sbjct: 42  -------FPLADVEAMGYHVEFHGQKAHYGVAIMSKQKPVKVEK-----GFPTDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +    E     +    I + +  F       +        +  + L+ ++        
Sbjct: 90  RMIMATFEREDGSL----IKVMNGYFPQGESQDHETKFPAKQKFYEDLQRYLETHHTPSD 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                          L    ++ + +        F     
Sbjct: 146 QLVLIGDMNISPTDLDIGIGEANRKRWLRDGKCSFLPIEREWMERLKGFGLTDTFRAANP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           + C        +           ID  +              +      D       + S
Sbjct: 206 TECERFSWFDYRSRGFDENRGLRIDLIMASDALKD-------TVTETGIDYELRGIDKPS 258

Query: 294 DHCPISI 300
           DH PI  
Sbjct: 259 DHAPIWA 265


>gi|94499690|ref|ZP_01306227.1| exodeoxyribonuclease III [Oceanobacter sp. RED65]
 gi|94428444|gb|EAT13417.1| exodeoxyribonuclease III [Oceanobacter sp. RED65]
          Length = 271

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+NIN                   +    +      L ADI+ LQE+    A  +V
Sbjct: 1   MRIVSFNING----------------VRARLHQIDAIKHQLKADIIGLQEV---KAAPEV 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P        +    I +     +   H  +A    N  +  Q     G          R
Sbjct: 42  VP-------VADIEAIGYKADIHSQKAHYGVANLSLNPSIECQQ----GFPGDTDDDQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                    NG+ + VL+       F       +        +    LKD++ +      
Sbjct: 91  FIHSQYKLNNGEILHVLN-----GYFPQGENRQHETKFPAKRKYYADLKDYLNKHLSPDN 145

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N  ++                           ++ + I        F  +  
Sbjct: 146 HIVVMGDMNVALHDEDIGIGEQNRKRWLRTEKCAFLPEEREWLQGILDWGLADSFRTQHP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             IDY ++ ++    L          + D      ++
Sbjct: 206 DTNDRYSWFDYRSKGFADDPKRGLRIDYILLSKSLMSKLK-------TADIDYDIRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI ++ +
Sbjct: 259 PSDHAPIYVELN 270


>gi|170019904|ref|YP_001724858.1| exonuclease III [Escherichia coli ATCC 8739]
 gi|253773296|ref|YP_003036127.1| exonuclease III [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|300818391|ref|ZP_07098601.1| exodeoxyribonuclease III [Escherichia coli MS 107-1]
 gi|300904608|ref|ZP_07122444.1| exodeoxyribonuclease III [Escherichia coli MS 84-1]
 gi|300924797|ref|ZP_07140737.1| exodeoxyribonuclease III [Escherichia coli MS 182-1]
 gi|300951354|ref|ZP_07165196.1| exodeoxyribonuclease III [Escherichia coli MS 116-1]
 gi|300958643|ref|ZP_07170767.1| exodeoxyribonuclease III [Escherichia coli MS 175-1]
 gi|301303958|ref|ZP_07210076.1| exodeoxyribonuclease III [Escherichia coli MS 124-1]
 gi|301327485|ref|ZP_07220718.1| exodeoxyribonuclease III [Escherichia coli MS 78-1]
 gi|301647945|ref|ZP_07247720.1| exodeoxyribonuclease III [Escherichia coli MS 146-1]
 gi|309793523|ref|ZP_07687950.1| exodeoxyribonuclease III [Escherichia coli MS 145-7]
 gi|331642351|ref|ZP_08343486.1| exodeoxyribonuclease III [Escherichia coli H736]
 gi|169754832|gb|ACA77531.1| exodeoxyribonuclease III [Escherichia coli ATCC 8739]
 gi|253324340|gb|ACT28942.1| exodeoxyribonuclease III [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|260449129|gb|ACX39551.1| exodeoxyribonuclease III [Escherichia coli DH1]
 gi|300314694|gb|EFJ64478.1| exodeoxyribonuclease III [Escherichia coli MS 175-1]
 gi|300403439|gb|EFJ86977.1| exodeoxyribonuclease III [Escherichia coli MS 84-1]
 gi|300419004|gb|EFK02315.1| exodeoxyribonuclease III [Escherichia coli MS 182-1]
 gi|300449344|gb|EFK12964.1| exodeoxyribonuclease III [Escherichia coli MS 116-1]
 gi|300529031|gb|EFK50093.1| exodeoxyribonuclease III [Escherichia coli MS 107-1]
 gi|300840755|gb|EFK68515.1| exodeoxyribonuclease III [Escherichia coli MS 124-1]
 gi|300845916|gb|EFK73676.1| exodeoxyribonuclease III [Escherichia coli MS 78-1]
 gi|301073916|gb|EFK88722.1| exodeoxyribonuclease III [Escherichia coli MS 146-1]
 gi|308123110|gb|EFO60372.1| exodeoxyribonuclease III [Escherichia coli MS 145-7]
 gi|315061052|gb|ADT75379.1| exonuclease III [Escherichia coli W]
 gi|315136390|dbj|BAJ43549.1| exonuclease III [Escherichia coli DH1]
 gi|315257443|gb|EFU37411.1| exodeoxyribonuclease III [Escherichia coli MS 85-1]
 gi|324016423|gb|EGB85642.1| exodeoxyribonuclease III [Escherichia coli MS 117-3]
 gi|331039149|gb|EGI11369.1| exodeoxyribonuclease III [Escherichia coli H736]
          Length = 272

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 82/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++   +     +  F  
Sbjct: 146 RDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|161503598|ref|YP_001570710.1| exonuclease III [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160864945|gb|ABX21568.1| hypothetical protein SARI_01677 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 268

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE        ++
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F +   
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  +   +   +          D      ++ S
Sbjct: 205 ETVDKFSWFDYRSKGFVDNRGLRIDLLLASRPLAERCAETGI-------DYDIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|325300418|ref|YP_004260335.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
 gi|324319971|gb|ADY37862.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
          Length = 283

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 79/308 (25%), Gaps = 33/308 (10%)

Query: 1   MIRKYV-LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           M R ++ +A++          AQ +   ++NI   +  +  + W+            + +
Sbjct: 1   MKRLFLAIAVITSAFFFLPCQAQTITWATFNIRYDNPADQSNNWQFRK-------DTVTR 53

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           + +  D DIV +QE+        +     +                +             
Sbjct: 54  FIQAQDMDIVGMQEVLHNQLEDLLQRLPGYKSIGVGRDDGKTKGEYAPILYKEDRFEVLD 113

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +       YP       +  A  R A    ++        + ++     F          
Sbjct: 114 SNTFWLSQYPDSIGFIGWDGACTRIATWAKMKDRQSGKIFMAVNTH---FDHVGVTARRE 170

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              L+ ++ + +            P V+ GDFN                   D+     K
Sbjct: 171 GALLIIRKIKEIV--------GDRPAVLTGDFNVNDQSEAYRTITSNAFVLKDAAKIAGK 222

Query: 240 EKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +         N           ID+  +                 +   +     K LSD
Sbjct: 223 QTGVD-YTFHNFGQIPSEQCEKIDFIFVTPQIKVL--------DSFIPKEAAPGSKFLSD 273

Query: 295 HCPISIDY 302
           H P  +  
Sbjct: 274 HNPQIVHL 281


>gi|302530966|ref|ZP_07283308.1| large secreted protein [Streptomyces sp. AA4]
 gi|302439861|gb|EFL11677.1| large secreted protein [Streptomyces sp. AA4]
          Length = 696

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/326 (10%), Positives = 76/326 (23%), Gaps = 65/326 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++ + ++N+  L+  +  + +         +             DIV L+E+   +  
Sbjct: 365 PGELSVATYNVENLAPSDSDTKYAQLAHGIVDNLAT---------PDIVTLEEIQDNSGA 415

Query: 81  AK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR------ 117
                              V        +     + +        +I             
Sbjct: 416 TDDGTVDADATLKKFTDTIVAAGGPQYQWRQINPVNDEDGGQPGGNIRVGFLFNPARVSF 475

Query: 118 ---------------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
                            + +      P      + +   +R+ +       G+ ++VL  
Sbjct: 476 VDRPGGSPTSSVGVVSDHGKAHLTQSPGRVDPGNEAWEDSRKPLAGEFVFRGRTVFVLAN 535

Query: 163 HLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKIN 216
           H  S          Y P    S     +QA  L+ ++ Q    +     V+AGD N    
Sbjct: 536 HFNSKGGDQPTHGRYQPPTRSSEVQRQKQATVLQGFVAQLLGADPRANVVVAGDLNDYQF 595

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                    K                +   +         +D+ +               
Sbjct: 596 SP----ALAKLTSGGLLKDLISTLPPAERYSYVYEGQSQVLDHILASGAPRG-------- 643

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
                         + SDH P  + +
Sbjct: 644 VDYDVVHVNAEFADQASDHDPQVVRF 669


>gi|300930770|ref|ZP_07146143.1| exodeoxyribonuclease III [Escherichia coli MS 187-1]
 gi|300461403|gb|EFK24896.1| exodeoxyribonuclease III [Escherichia coli MS 187-1]
          Length = 272

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 82/312 (26%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L    +    D++ LQE       
Sbjct: 2   AATMKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVH 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP             + ++        H  +A+  K   +  +              
Sbjct: 43  DDMFP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEE 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +       +Q  Q L++++  + +
Sbjct: 91  AQRRIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQHLQNYLETELK 145

Query: 201 SLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPK 239
              P +I GD N                          L    ++   +     +  F  
Sbjct: 146 RDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRH 205

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +       +           ID  +  Q   +  ++          D      +
Sbjct: 206 ANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSME 258

Query: 291 RLSDHCPISIDY 302
           + SDH P+   +
Sbjct: 259 KPSDHAPVWATF 270


>gi|256824430|ref|YP_003148390.1| Exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547]
 gi|256687823|gb|ACV05625.1| Exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547]
          Length = 281

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 84/312 (26%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ +WN+N+L                 +    + ++ +  + D++ LQE  +      A
Sbjct: 1   MRIATWNVNSL----------------RARLDRVAEFLQRHEVDVLALQETKVQDDKFPA 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F +  + I +               +    +A+  +              +  +    
Sbjct: 45  ERFAELGYEIAFH------------GLNQWNGVAIASRVGLEDVTV--AFPDQPGWGDEP 90

Query: 142 NRRAVELLVEINGKK---------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              A  L   + G+          I +  +++ +   +      Y             L 
Sbjct: 91  VVEARALGATVGGQPRADGSATPRIRLWSLYVPNGREIGHPHMDYK------VGWLDTLA 144

Query: 193 DWITQKKESLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRF 237
                     +P  + GDFN                  +        ++       +   
Sbjct: 145 GHAGTWAGEDLPLALVGDFNVAPLDTDVWDIAAFEGHTHVTEPERAAFQGFLDAGLVDVV 204

Query: 238 PKEKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +        R  + ID+ +  Q     +            D  + +GK
Sbjct: 205 RPHTEPDTFTYWDYQQLRFPKRQGMRIDFVLGSQPFADRVTGAFV-------DREERKGK 257

Query: 291 RLSDHCPISIDY 302
             SDH P+ +D 
Sbjct: 258 GASDHAPVVVDL 269


>gi|256822581|ref|YP_003146544.1| endonuclease/exonuclease/phosphatase [Kangiella koreensis DSM
           16069]
 gi|256796120|gb|ACV26776.1| Endonuclease/exonuclease/phosphatase [Kangiella koreensis DSM
           16069]
          Length = 248

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 77/288 (26%), Gaps = 51/288 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++++++NI+     +                  + +  ++ DADI+ LQE+      ++
Sbjct: 2   KLKVITYNIHRAIGVDRRFRP-----------ERIVEILESYDADIIALQEVDDGVPRSR 50

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                               K  S    H   A   +   V +++  L            
Sbjct: 51  ELNLAKELAEALDFPYYVLGKNVSLKKGHYGNATLSRYPIVRERNIDLTI-----DNKKR 105

Query: 143 RRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           R      ++I     K++ +   +L               S     +Q Q L       K
Sbjct: 106 RGCQHTTIDIPSSPSKEVHLEVFNLHLGL-----------SAKERDKQIQKLLHSSEYNK 154

Query: 200 -ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR----CNANKNLRNK 254
                  +I GDFN             K +      +     +            +   +
Sbjct: 155 LNEDSNKLIIGDFNDW------RSLLRKPLTEEAGFLCATDRRYKNKVSALKTYPSFSPR 208

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +D      +     +              K   K  SDH P+  ++
Sbjct: 209 GGLDRIFYQGDLKLKNVF----------LCRKKLSKVASDHKPVIAEF 246


>gi|205352972|ref|YP_002226773.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207857189|ref|YP_002243840.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|205272753|emb|CAR37670.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206708992|emb|CAR33322.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326628046|gb|EGE34389.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 268

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE        ++
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNITVIN-----GYFPQGENRDHPLKFPAKAQFYQNLQNYLETELKCDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F +   
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +   +          D      ++ S
Sbjct: 205 QTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|160890824|ref|ZP_02071827.1| hypothetical protein BACUNI_03269 [Bacteroides uniformis ATCC 8492]
 gi|317479743|ref|ZP_07938865.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|156859823|gb|EDO53254.1| hypothetical protein BACUNI_03269 [Bacteroides uniformis ATCC 8492]
 gi|316904113|gb|EFV25945.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 249

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 86/301 (28%), Gaps = 60/301 (19%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M R   L+++F L+    + AQ+V ++S+N++     +              +Y  +   
Sbjct: 1   MKRNLFLSVLFVLM-FAPAHAQQVNILSYNVHNCIGMDK-----------EYNYRRIANV 48

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 DIV LQE+ S     K           +      ++           I +  + 
Sbjct: 49  ISQTSPDIVALQELDSVTVRNKGIHALGELEKLTGM-HGTYAAAIPFQGGSYGIGILSRE 107

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           + +  +  P+ G      R   R  +    +      +V     +S    D         
Sbjct: 108 IPIKYKIIPMPG------REEKRTLIIAEFKD-----YVFCATHQSLTPED--------- 147

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                 Q   +       +    P  +AGD N     +             +    F   
Sbjct: 148 ------QLLAVPLIEKALQNVDKPIFMAGDMNSAPASVP----------QLELAKHFATL 191

Query: 241 KDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            D+        R    IDY     +N Y+F +Q                    SDH P+ 
Sbjct: 192 NDTTSYTFPADRPNRCIDYIYGYSKNGYRFDVQ----------YRKVIEDTISSDHRPVQ 241

Query: 300 I 300
           +
Sbjct: 242 V 242


>gi|163746501|ref|ZP_02153859.1| exodeoxyribonuclease III, putative [Oceanibulbus indolifex HEL-45]
 gi|161380386|gb|EDQ04797.1| exodeoxyribonuclease III, putative [Oceanibulbus indolifex HEL-45]
          Length = 260

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 86/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NIN                   +    L ++      D+V LQE+ S   V + 
Sbjct: 1   MKIASFNING----------------IKARAAALPEWLDEAQPDVVVLQEIKS---VDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+              ++           +A+  K              +D  +R    
Sbjct: 42  FPREM-------LEERGYNVETHGQKSFNGVAILSKLPLEDVTRGLPGDDEDDQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V  +   + V  ++L +   +   +  Y  +          L+           
Sbjct: 92  --IEATVVGDDMALRVCGLYLPNGNPVPGPKYDYKLA------WMARLQARAEALLAEET 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF++AGD+N                   +   +   W+ +        F        + +
Sbjct: 144 PFLMAGDYNIIPQAEDAAKPDSWREDALFRPESRAAWRRLVNLGLTDAFRARTQGPGHYS 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+F++       L            D       + SDH P+ +
Sbjct: 204 FWDYQAGAWNRNNGIRIDHFLLSPTVADRLRDCQI-------DRDVRGRDKPSDHVPVWV 256

Query: 301 DY 302
           + 
Sbjct: 257 EL 258


>gi|77463209|ref|YP_352713.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
 gi|77387627|gb|ABA78812.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
          Length = 259

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 88/302 (29%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  + +  + D+V LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------VKARLEALLAWLEAAEPDVVLLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +                   +A+  +              +D  +R    
Sbjct: 42  FPR-------AAFEDKGWHLETHGQKGFNGVAILSRLPLEDVVRGLPGDPEDVQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V +  + + V  ++L +       +  Y           + +K    +   +  
Sbjct: 92  --IEATV-VGERAVRVCGLYLPNGNPAPGPKYDYK------LGWMERMKARAAELLATEE 142

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                       +   ++ I        F        + +
Sbjct: 143 PVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAFRRIVNLGYTEAFRARTFGPGHYS 202

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ ++   A   +            D     G++ SDH P+ +
Sbjct: 203 FWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDV-------RIDREVRSGEKPSDHVPVWV 255

Query: 301 DY 302
           + 
Sbjct: 256 EL 257


>gi|3044072|gb|AAC13276.1| beta-hemolysin [Staphylococcus schleiferi]
          Length = 329

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/323 (16%), Positives = 99/323 (30%), Gaps = 43/323 (13%)

Query: 7   LALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           L L+   +  TA  A+      ++LV+ N+  L +     L+ N  +   +D      Y 
Sbjct: 18  LFLLGLSIQSTAHAAKPVDNNELKLVTHNVYMLPKS----LYPNWGQSIRADLISQSFYI 73

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------A 113
           K    D+V L E    +A  ++         + T  L        + +            
Sbjct: 74  KGN--DVVILNEAFDNSASNQLLNNLKNEYPHQTGVLGRSRSGWDSTEGSYSSTVLEDGG 131

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           +AV  K     +  +        F    N+  V   +E +GK   V+  H ++       
Sbjct: 132 VAVVSKYPIKERIQHVFRRGC-GFDNDSNKGFVYTKIEKDGKNFHVIGTHTQAEDSRCGA 190

Query: 174 ENTYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPN 231
                    + ++Q + +  ++  +         I GD N   N   G   D  K ++ N
Sbjct: 191 GYDR----EIRAEQMREISTFVKNKNIPKDEVVYIGGDLNVNKNSTSGEFQDMLKNLNVN 246

Query: 232 DSLIRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYK---------FLIQESFSE 277
           D   +                N        +DY  +D++  +              S+  
Sbjct: 247 DVTYKGHTSTWDPETNYIAQYNFPNAKPEYLDYIFVDKDHRQPGQLINEAIDAKAPSWHV 306

Query: 278 ILYNEDDIKSRGKRLSDHCPISI 300
             +            SDH P+S 
Sbjct: 307 YAFP---YTYYYNDFSDHYPVSA 326


>gi|325859957|ref|ZP_08173084.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
 gi|325482483|gb|EGC85489.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
          Length = 356

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/332 (12%), Positives = 90/332 (27%), Gaps = 46/332 (13%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTT---- 51
            + +L LVF L+   ++   ++ +V  N   L +        +   L  +    T     
Sbjct: 32  MRTLLILVFTLLSVPSAAQSRLTIVELNAENLFDTRHDTLKNDYEFLPDSPRHWTRTKYW 91

Query: 52  SDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
                  Q               DIV L E+ + + +  +  ++        +    +  
Sbjct: 92  EKLNRTGQTIIACGEDSSGWHLPDIVGLCEVENDSVLFDLTRRS-----LLRKARYEYVM 146

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDI 162
             S++     +A+              +           R  + +  EI NG  + V  +
Sbjct: 147 TASDDRRGIDVALLYSPFSFRLIKADTIHVAPMADMRPTRDILHVEGEIENGDTLHVFLL 206

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           H  S    +     +    + L  QA      +     +    ++ GDFN   +      
Sbjct: 207 HAPSRMGGERYSRPFRLYVAGLLCQAVDSLRSL----YADPRILVMGDFNDYADSPSVRL 262

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS------ 276
              +       +       +      +       +D  ++ +N   ++I           
Sbjct: 263 LCTRGFVN---VSARAHGNNGAKGTYRYHGAWGSLDQILVSENLCPWVISCHVHDAAFLL 319

Query: 277 --------EILYNEDDIKSRGKRLSDHCPISI 300
                          +        SDH P+ +
Sbjct: 320 EEDDKYGGVKPRRNYNGMRYNNGFSDHLPLVL 351


>gi|270295831|ref|ZP_06202031.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273235|gb|EFA19097.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 249

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 85/301 (28%), Gaps = 60/301 (19%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M R   L+++F L+    + AQ+V ++S+N++     +              +Y  +   
Sbjct: 1   MKRNLFLSVLFVLM-FAPAHAQQVNILSYNVHNCIGMDK-----------EYNYRRIANV 48

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 DIV LQE+ S     K           +      ++           I +  + 
Sbjct: 49  ISQTSPDIVALQELDSVTVRNKRIHALGELEKLTGM-HGTYAAAIPFQGGSYGIGILSRE 107

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           + +  +  P+ G      R   R  +    +      +V     +S    D         
Sbjct: 108 IPIKYKIIPMPG------REEKRTLIIAEFKD-----YVFCATHQSLTPED--------- 147

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                 Q   +       +    P  +AGD N                   +    F   
Sbjct: 148 ------QLLAVPLIEKALQNVDKPIFMAGDMNSAPASAP----------QLELAKHFATL 191

Query: 241 KDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            D+        R    IDY     +N Y+F +Q                    SDH P+ 
Sbjct: 192 NDTTSYTFPADRPNRCIDYIYGYSKNGYRFDVQ----------YRKVIEDTISSDHRPVQ 241

Query: 300 I 300
           +
Sbjct: 242 V 242


>gi|327191803|gb|EGE58803.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512]
          Length = 263

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 101/306 (33%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+ D DIV LQE+ +   + + 
Sbjct: 1   MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  K+            A D  +R    
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKSSPSEVNRGLPGDALDEQARF--- 91

Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +E +  +   +I  V  I+L +   +++ +  Y  +        + L+ +  ++ +  
Sbjct: 92  --LEAVFTLPDTRILRVCCIYLPNGNPVETEKYPYKLA------WMERLRSFAAERLDYE 143

Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              V+AGD+N                   +L    + ++ ++ N  L    +        
Sbjct: 144 EMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREAFRKLE-NLGLTDAVRATTDATQL 202

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   +   +  + +          ++ SDH P+
Sbjct: 203 YSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPV 255

Query: 299 SIDYDF 304
              +DF
Sbjct: 256 IAYFDF 261


>gi|32472775|ref|NP_865769.1| signal peptide [Rhodopirellula baltica SH 1]
 gi|32444012|emb|CAD73454.1| hypothetical protein-signal peptide prediction [Rhodopirellula
           baltica SH 1]
          Length = 284

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 80/285 (28%), Gaps = 30/285 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + +R+V++NI  L      S               L       D DI+   E  S   
Sbjct: 29  SPKPLRVVAYNIYNLKGWPSQSPLAQQAVARGQMAKRLAMELALYDPDIINFSESPSEKL 88

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +V                NH +  S  +    +  + K              K+ F+R
Sbjct: 89  TKEVAELLGM----------NHVRFPSGGNWPGTLLSKSKISDSQNAPMNGERPKELFTR 138

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  VEL    N + + V   HL                  +  ++ + +   +    
Sbjct: 139 HWGRALVEL---PNDEPLIVHSAHLYPTPEPT-----------IRLREIRAMIKSMKSDL 184

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +S    ++ GD N   +                 +  F K  +      K    +  IDY
Sbjct: 185 DSGRSMLLIGDLNHSPDTDEYKLW-----KDAGWIDTFAKVGEGNGFTIKADNPEWRIDY 239

Query: 260 FVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   K +       E  +  ++   +   LSDH P    +D
Sbjct: 240 VFATGPIAKRVGESRPLFEGAFRVNNEDEKSYALSDHLPQLAVFD 284


>gi|294670922|ref|ZP_06735778.1| hypothetical protein NEIELOOT_02626 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307409|gb|EFE48652.1| hypothetical protein NEIELOOT_02626 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 261

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 83/303 (27%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++ +  +   DI+ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRLPQVQNWLADHRPDILALQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +       +        +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHSVWSGQKTYNGVAIISRGEPQDVHT-----GLPTLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + +++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATVN----GVRIVNVYCVNGEALDSPKFQYKE------QWFAALTEFLRNELSRHE 139

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GDFN                          +++ +          +         
Sbjct: 140 KLILLGDFNIAPADADCYAPEKWHEKILCSSIERQWFQNLLDLGLTDSLRQIHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +  +     L            D      +R SDH P+ 
Sbjct: 199 TWFDYRGAMFQRKQGLRIDHILTSRTMASALQD-------MQVDYDTRALERPSDHAPVW 251

Query: 300 IDY 302
             +
Sbjct: 252 AQF 254


>gi|84386405|ref|ZP_00989433.1| putative phospholipase C precursor [Vibrio splendidus 12B01]
 gi|84378829|gb|EAP95684.1| putative phospholipase C precursor [Vibrio splendidus 12B01]
          Length = 448

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 96/290 (33%), Gaps = 26/290 (8%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + ++++N+  L+      +   S          ++   K  DA  +  QE+   +  +
Sbjct: 172 NSINILTYNVWALNPLGISGIVSRSAN---ERLKQIKDKVKGYDA--IVFQELFDNSERS 226

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                          +     +  S  D    I       + +Q ++      D  +   
Sbjct: 227 IFLNALKSEY---PYQTRVVDRAGSPEDGGVLIVSHWPIEKEVQMTFDQCAGSDCLA--- 280

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           ++  +   +   G    +   H +++              ++ +QQ + ++ +I  +  +
Sbjct: 281 SKGVIYAKINKGGNPYHIFGTHPQAWS--------TKEGRAVRAQQFEQMRAFIDAQYIN 332

Query: 202 L-VPFVIAGDFN-RKINYLGNNDDFWKTIDPND--SLIRFPKEKDSRCNANKNL---RNK 254
              P VIAGD N  KI YL   +D  KT+   +      +P   D   NA       + K
Sbjct: 333 GAEPVVIAGDLNVDKIKYLPEYEDMLKTLVSEEVPRFKSYPYTFDGAVNAWVTDEEKKQK 392

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +DY +   +        S   I  + +        LSDH  +S    F
Sbjct: 393 EYLDYVLYSTSHLSPDSSSSKVIIPRSTNVDLFTKYDLSDHFAVSARLTF 442


>gi|77360282|ref|YP_339857.1| exonuclease III [Pseudoalteromonas haloplanktis TAC125]
 gi|76875193|emb|CAI86414.1| exonuclease III [Pseudoalteromonas haloplanktis TAC125]
          Length = 268

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 78/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        DI+ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHQPDIIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        + + +         H  +A+  K            G       +  R
Sbjct: 42  -------FPLEDVQKMGYHVYYHGQKAHYGVAMLCKKEPKSV----FKGFATDTEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                + + NG+ + V++       F       +        Q  + L   +        
Sbjct: 91  MISVTVEQDNGRDLTVMN-----GYFPQGENINHETKFPYKRQFYKDLMTHLQTNHTPDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++  T+        F ++  
Sbjct: 146 DVIVMGDINISPTNLDIGIGEVNAKRWLKTGKCSFQPIEREWLATLLNWGFKDTFREQNP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +         I           D      ++ S
Sbjct: 206 ETSDQYSWFDYRSKGFLDNRGLRIDVVLATHELAARCIDTGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 259 DHAPIWSEF 267


>gi|298386270|ref|ZP_06995826.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
 gi|298260647|gb|EFI03515.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
          Length = 373

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/328 (11%), Positives = 91/328 (27%), Gaps = 57/328 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD----AD 67
             R++SWN+  L +    +L  ++             +       + +    +       
Sbjct: 52  PFRVMSWNVENLFDTHHDTLKNDNEFLPDAIRHWNYTKYKKKLADMARVITAVGEWNPPA 111

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V L E+ + + +  +  ++          + +         I  A+  ++   ++L   
Sbjct: 112 LVGLCEVENDSVLRDLTRRSPLKELSYRYVMTSSPDL---RGIDVALLYQRDLFKLLS-- 166

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLS 185
           +  +           R  + +  + + G  + V+  HL S          Y   +  +L 
Sbjct: 167 FRSIPIPSFKHHRPTRDLLHVSGLLLTGDTLDVIVCHLPSRSGGAKESEPYRLHAARILR 226

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---------IDPNDSLIR 236
            +A  L +            VI GDFN         +    T                + 
Sbjct: 227 TEADSLLN-----IRLHPQLVIMGDFNDYPTNKSIKEILEATDPQQSVTFPNPRKLYHLL 281

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------------IQESF 275
             K       + K       +D+ ++  N                           ++  
Sbjct: 282 ARKATSRHFGSYKYHGKWGLLDHLIVSGNLLDTSSKFFTGEDKATVARLPFLLTEDKKYG 341

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +  +           +SDH P+  D++
Sbjct: 342 DDEPFRTYKGMKYQGGISDHLPVYADFE 369


>gi|167624545|ref|YP_001674839.1| exonuclease III [Shewanella halifaxensis HAW-EB4]
 gi|167354567|gb|ABZ77180.1| exodeoxyribonuclease III [Shewanella halifaxensis HAW-EB4]
          Length = 268

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+        DI+ LQE        + 
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDTHQPDIIGLQE---TKVHDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP        +    + +         H  +A+  K   +  Q       +D    A  R
Sbjct: 42  FP-------LADVEAMGYHVHYHGGKAHYGVAMLSKAEPIKVQKGFPTDEED----AQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++ NG+ + V++       F      ++        +  + L  ++ +   +  
Sbjct: 91  MIMGTFMQENGRPLTVIN-----GYFPQGDNISHETKYPAKRKFYKDLMQYLNEYHSADE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGLVDTFRELHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +R         +           ID  +  ++  + L +        + D      ++ S
Sbjct: 206 TRSERYSWFDYRSKGFVDNRGLRIDVILATKSLAQHLTES-------DVDYELRGIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 259 DHAPIWSSFS 268


>gi|16760593|ref|NP_456210.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|16764653|ref|NP_460268.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29141647|ref|NP_804989.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|56413712|ref|YP_150787.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161614297|ref|YP_001588262.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167552346|ref|ZP_02346099.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167991882|ref|ZP_02572981.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168233217|ref|ZP_02658275.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168238968|ref|ZP_02664026.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168244409|ref|ZP_02669341.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168263883|ref|ZP_02685856.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|194446222|ref|YP_002040559.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194449710|ref|YP_002045308.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194471225|ref|ZP_03077209.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194733972|ref|YP_002114319.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197250009|ref|YP_002146737.1| exonuclease III [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|197264133|ref|ZP_03164207.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197362635|ref|YP_002142272.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198244728|ref|YP_002215824.1| exonuclease III [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
 gi|200389740|ref|ZP_03216351.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204927863|ref|ZP_03219064.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|213023056|ref|ZP_03337503.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. 404ty]
 gi|213162974|ref|ZP_03348684.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E00-7866]
 gi|213427783|ref|ZP_03360533.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E02-1180]
 gi|213581312|ref|ZP_03363138.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-0664]
 gi|213612544|ref|ZP_03370370.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-2068]
 gi|213648612|ref|ZP_03378665.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. J185]
 gi|213850398|ref|ZP_03381296.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. M223]
 gi|60392242|sp|P0A1A9|EX3_SALTY RecName: Full=Exodeoxyribonuclease III; Short=EXO III;
           Short=Exonuclease III; AltName: Full=AP endonuclease VI
 gi|60392243|sp|P0A1B0|EX3_SALTI RecName: Full=Exodeoxyribonuclease III; Short=EXO III;
           Short=Exonuclease III; AltName: Full=AP endonuclease VI
 gi|25289127|pir||AC0710 exodeoxyribonuclease III (EC 3.1.11.2) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|4324669|gb|AAD16979.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16419819|gb|AAL20227.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16502889|emb|CAD02052.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137275|gb|AAO68838.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56127969|gb|AAV77475.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161363661|gb|ABX67429.1| hypothetical protein SPAB_02042 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404885|gb|ACF65107.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408014|gb|ACF68233.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457589|gb|EDX46428.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194709474|gb|ACF88695.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197094112|emb|CAR59612.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197213712|gb|ACH51109.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242388|gb|EDY25008.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197288283|gb|EDY27668.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197939244|gb|ACH76577.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199602185|gb|EDZ00731.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204323205|gb|EDZ08401.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323022|gb|EDZ10861.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205329685|gb|EDZ16449.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205332615|gb|EDZ19379.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205336751|gb|EDZ23515.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205347536|gb|EDZ34167.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|261246511|emb|CBG24321.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267993174|gb|ACY88059.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301157839|emb|CBW17333.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912288|dbj|BAJ36262.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321223927|gb|EFX48990.1| Exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322616690|gb|EFY13599.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322619793|gb|EFY16667.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622362|gb|EFY19207.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627886|gb|EFY24676.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633016|gb|EFY29759.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636738|gb|EFY33441.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322641236|gb|EFY37877.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322645225|gb|EFY41754.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322650167|gb|EFY46581.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655740|gb|EFY52042.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322660066|gb|EFY56305.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322665367|gb|EFY61555.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322669646|gb|EFY65793.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673551|gb|EFY69653.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677477|gb|EFY73541.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322679858|gb|EFY75897.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322687330|gb|EFY83302.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323129573|gb|ADX17003.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323192448|gb|EFZ77678.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323198697|gb|EFZ83798.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323204125|gb|EFZ89139.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323208743|gb|EFZ93681.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323210257|gb|EFZ95156.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323217719|gb|EGA02434.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323220274|gb|EGA04729.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323227561|gb|EGA11719.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323229522|gb|EGA13645.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323232745|gb|EGA16841.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323240216|gb|EGA24260.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242796|gb|EGA26817.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323249113|gb|EGA33032.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323254387|gb|EGA38204.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323257176|gb|EGA40879.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323263503|gb|EGA47031.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323267084|gb|EGA50569.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323271592|gb|EGA55013.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326623571|gb|EGE29916.1| exonuclease III [Salmonella enterica subsp. enterica serovar Dublin
           str. 3246]
 gi|332988190|gb|AEF07173.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 268

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE        ++
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F +   
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +   +          D      ++ S
Sbjct: 205 QTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|28414377|gb|AAO40752.1| sphingomyelin-specific phospholipase [Bacillus cereus]
          Length = 333

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 91/272 (33%), Gaps = 31/272 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N                 +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAY 267
                       N        +DY +  ++  
Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHA 289


>gi|321468777|gb|EFX79760.1| hypothetical protein DAPPUDRAFT_3216 [Daphnia pulex]
          Length = 288

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 98/294 (33%), Gaps = 23/294 (7%)

Query: 24  VRLVSWNI--NTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +RL+ WNI   +L E  +             +    + +     + DI+ LQE+  Y  +
Sbjct: 1   IRLLQWNILSQSLGEHNDNFVRCPLEALDWRTRRYRIVEEIVEYNPDIICLQEVDHYQFL 60

Query: 81  AKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           ++      +   Y  +        + +N     AI  R  +  +++    ++      S 
Sbjct: 61  SRALRSQGYEGIYFPKPDSPCIYIKGNNGPDGCAIFYRANDYELIKVETRIVEVWRVQSN 120

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                   L  + +G++I V   HLK+           +   +L ++Q + + D++    
Sbjct: 121 QVV-ILTMLRHKASGREICVATTHLKA--------RQGALLSTLRNEQGKDILDFLQNNV 171

Query: 200 E-SLVPFVIAGDFNRKINYL---GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
           + +  P ++AGDFN +           D     D          E+  +       + + 
Sbjct: 172 DVADCPIIMAGDFNAEPTEPVYSTIRSDSRFGFDSAYRCDVDGAEEAGQEPPYTTWKVRG 231

Query: 256 ------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY    +          F        D     +  SDH  + +D+D
Sbjct: 232 EGESCHTIDYVFFSRRQLGVNQVLPFPTGEQIGPDRVPSFQYPSDHFSLVVDFD 285


>gi|168463303|ref|ZP_02697234.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168821944|ref|ZP_02833944.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|195634571|gb|EDX52923.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|205341658|gb|EDZ28422.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
          Length = 268

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE        ++
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F +   
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFREANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +   +          D      ++ S
Sbjct: 205 QTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|186681878|ref|YP_001865074.1| outer membrane adhesin like proteiin [Nostoc punctiforme PCC 73102]
 gi|186464330|gb|ACC80131.1| putative outer membrane adhesin like proteiin [Nostoc punctiforme PCC
            73102]
          Length = 2156

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 89/328 (27%), Gaps = 50/328 (15%)

Query: 15   PCTAS-VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDAD 67
            P T   V   +++ S+N+       G      + +              + Q       D
Sbjct: 1293 PVTPPNVGGTLKVASFNVLNFFNGNGTGGGFPTSRGAENLIELNRQRNKIIQAIVTSGVD 1352

Query: 68   IVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
            +V L+E+ +      +A+  +           T   IN     + ++I   +  +     
Sbjct: 1353 VVGLEELENDGYGSTSAIQDLVNGLNAVAGAGTYSFINPGTSLATDEITVGLIYKSGK-- 1410

Query: 123  VLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP- 179
            V            +      R+ +        NG++  V+  H KS              
Sbjct: 1411 VTPVGAAATLTTSAAFNLVGRQPLAQTFGQNSNGEQFTVVVNHFKSKGSSSGGVGDADAG 1470

Query: 180  -----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                 S    ++QAQ L  W+  K    +   +++ GD N              T+    
Sbjct: 1471 DGQGFSNGTRTRQAQDLAAWLATKPTGTNDTDYLVVGDLNSYAKEDP-----LTTLAGAG 1525

Query: 233  SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--- 289
                 P        +         +D+ +   +    +       I  +E  +       
Sbjct: 1526 YNNLLPD----TSYSYVFDGQVGSLDHALATSSLAAQVSGAEKWHINADEPSVLDYNTNF 1581

Query: 290  --------------KRLSDHCPISIDYD 303
                           R SDH P+ +  +
Sbjct: 1582 KSAGQISSLYNADQFRASDHDPVLVGLN 1609


>gi|289641553|ref|ZP_06473715.1| exodeoxyribonuclease III Xth [Frankia symbiont of Datisca
           glomerata]
 gi|289508648|gb|EFD29585.1| exodeoxyribonuclease III Xth [Frankia symbiont of Datisca
           glomerata]
          Length = 425

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 84/308 (27%), Gaps = 71/308 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNA 79
           +  VR+ +WNIN                   +    L ++      D+V LQE   S  A
Sbjct: 79  SDGVRVATWNIN----------------SAKARQARLIEWLDRAQPDVVCLQETKLSDAA 122

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             ++F ++ +           +      +     +A+  +      ++   L     F  
Sbjct: 123 FLELFDEDLFR--------RGYRVAHHGDGRWNGVAIFSRAGLDDVEA--GLADGPGFPA 172

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R A+          I +  +++ +   +D     Y             L+  + +  
Sbjct: 173 PEPR-ALAATC----GGIRIWSLYVPNGRAVDDPHYAYK------LTWLAALRASVEKAL 221

Query: 200 ESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSR 244
            +  P +  GDFN         D                  + +     +    + +   
Sbjct: 222 -TTAPVIACGDFNIAPTDADVWDPAAFAGATHVTDAERRALRELTDLGLVDVMRR-RWPD 279

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +         + ID  +   +    +            D    +G   SDH
Sbjct: 280 EQVFTYWDYRALMFPKNMGMRIDLLLASDSLVDRVRAVWV-------DRQARKGTGTSDH 332

Query: 296 CPISIDYD 303
            P+ +D D
Sbjct: 333 APVIVDLD 340


>gi|73540991|ref|YP_295511.1| exodeoxyribonuclease III [Ralstonia eutropha JMP134]
 gi|72118404|gb|AAZ60667.1| Exodeoxyribonuclease III [Ralstonia eutropha JMP134]
          Length = 275

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 86/314 (27%), Gaps = 65/314 (20%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQ 72
           +      +  +R+ SWN+N+L              R       L +  +     D + LQ
Sbjct: 1   MSAVLPTSGPLRIASWNVNSL------------KVRLPQVLQWLTEQEQAGAPIDALCLQ 48

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+          P + +    +           +    +  +A+  ++   +     ++ 
Sbjct: 49  ELK--------LPDDKYP--LAELENAGFHSVYTGQKTYNGVAILARDAS-MPGPVDVVR 97

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
               F  A  R     +V      I ++  +  +    DS +  Y        +    + 
Sbjct: 98  NIPGFEDAQQR-----VVAATYGDIRLVCAYFPNGQAPDSDKFVYK------LKWLDAMT 146

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIR----------FP 238
            W+ ++        + GDFN        +D         + P +                
Sbjct: 147 AWLREELAKYPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQERAAFTALVELGLADAF 206

Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           ++ +    A      ++          ID+ ++                    D      
Sbjct: 207 RKFEQPEKAFSWWDYRMFAFRRNAGLRIDHILLSPELASSCSACVI-------DRAPRTW 259

Query: 290 KRLSDHCPISIDYD 303
           ++ SDH P+    +
Sbjct: 260 EQPSDHTPVVATLN 273


>gi|325915987|ref|ZP_08178280.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537797|gb|EGD09500.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937]
          Length = 279

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 95/288 (32%), Gaps = 36/288 (12%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A  A+++ LV+ N++   E               S  T + +  K L  D++ LQE+
Sbjct: 18  AAPAPSARELTLVTLNLHHDRED------------WPSRRTYIAKELKQLAPDVIALQEV 65

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   V  + TW        +I  S            A+  +   + + +  L    
Sbjct: 66  IERRG--SVENQATWLARKLGYEVIFASADPVGAPKRYGNALLSRGKVLARHARLLQPLD 123

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R A  L V+++G+ + V   HL         E   +   +  ++Q   L D+
Sbjct: 124 DY------RVAAHLQVDVDGQPVNVYVTHLN--------ERADARGTATRTRQIGDLLDF 169

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I        P VIAGDFN   + L          D   S+ R      S  N +      
Sbjct: 170 IASTSVQ-APVVIAGDFNTAADALDLEALRRGYGDSYGSVHRNSDATVSTLNLHV-FDKP 227

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ID+    QN           +  Y      + G+  SDH  + +  
Sbjct: 228 ARIDHVFFQQNRLLAREARILFDTPY------AEGRWASDHYGVWVRL 269


>gi|255713086|ref|XP_002552825.1| KLTH0D02310p [Lachancea thermotolerans]
 gi|238934205|emb|CAR22387.1| KLTH0D02310p [Lachancea thermotolerans]
          Length = 739

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/329 (13%), Positives = 93/329 (28%), Gaps = 42/329 (12%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            ++ +   ++S+N      +  +      +           L++   + + DIV LQE+ 
Sbjct: 402 ETLKKSFTILSYNTLCQHYATPKMYRFTPSWALSWEYRREKLKEQILSYNTDIVCLQEVE 461

Query: 76  S---YNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                +  A +  +  +  IF++  R      +DS          +    +++ +     
Sbjct: 462 CKTYEDFWAPLLREKGYSGIFHTKTRARTMHSKDSKKVDGCCFFYKDSEFKLMFKEAVDF 521

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK-----SFCFLDSLENTYSPSCSLLSQ 186
            +     +   R    L   +N   + ++                +  +       + + 
Sbjct: 522 SSVWMKHKKFQRTEDYLNRAMNKDNVALVVKLQHIKSGEHVWAATTHLHWDPQFNDVKTF 581

Query: 187 QAQWLKDWITQKKES-----------LVPFVIAGDFNRKINYLGNNDD------FWKTID 229
           Q   L D++ +  +             VP VI GDFN + N               + I+
Sbjct: 582 QVGVLLDYMEKVIKEQNNCNNTQELKKVPVVICGDFNSQTNSAVYELLNTGNVSKHRDIE 641

Query: 230 PNDSLIRFPKEKDSR-------------CNANKNLRNKIPIDYFVM-DQNAYKFLIQESF 275
             D      K                     N        IDY     Q      +    
Sbjct: 642 GRDFGYMSQKNYAHNLPLKSSYDSIGELPFTNLTPTFTDVIDYIWYSSQGLRVRGLLGEI 701

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                ++       K  SDH P+   ++F
Sbjct: 702 DPEYASKFIGFPNDKFPSDHIPLITRFEF 730


>gi|52307155|gb|AAU37655.1| XthA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 275

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 80/313 (25%), Gaps = 77/313 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79
             ++++S+NIN L                 +    L +  +    DI+ LQE  +     
Sbjct: 7   NNMKIISFNINGL----------------RARPHQLDKIVEQYQPDIIGLQEIKVADEMF 50

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             ++     + +++                 H  +A+  K              +D+  R
Sbjct: 51  PHELVDHLGYHVYHH------------GQKGHYGVALLCKQAPKAVHKGFSTDTEDAQKR 98

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                 +    E     + V++       F       +        +    L +++  + 
Sbjct: 99  -----LIMADFETAFGALTVVN-----GYFPQGESRDHETKFPAKEKFYADLLNYVKNEH 148

Query: 200 ESLVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFP 238
                 +I GD N                          L    ++++ +        F 
Sbjct: 149 NPESNIIIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWYQRLYECGLEDTFR 208

Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           K      +       +           ID+ + +    +  +                  
Sbjct: 209 KLNPWTNDKFSWFDYRSKGFAENRGLRIDHILANSKLAERCVDTGI-------ALDIRAM 261

Query: 290 KRLSDHCPISIDY 302
           ++ SDH PI   +
Sbjct: 262 EKPSDHAPIWATF 274


>gi|84625788|ref|YP_453160.1| nuclease [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84369728|dbj|BAE70886.1| nuclease [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 572

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 84/324 (25%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+ +       G      +       ++  +    L   
Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFKLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +    A            +         I+       + I   I 
Sbjct: 316 IVPLGADVAALMELENDGNAADAAVAQLVAALNAAGKDKDWHFIDSGSGPGADAIRVGIV 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +    +   G    V+  H KS  C   S 
Sbjct: 376 YRSSQVTPVGKPATLTGGPFDNH---SRVPLAQAFLSTRGATFVVVANHFKSKGCGNASG 432

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L +W+            V+ GDFN     +        
Sbjct: 433 ADADQQDGQACWNATRTESAKGLHEWLQTDPTGAQTKRAVLVGDFNAYAMEMPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +          D+ ++     K L       I  +  D  
Sbjct: 489 -LRASGWQDAFAVAGVKQPYSFVYDGMSGRQDHALLSPAMAKQLRGAVEWHINADVMDAA 547

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571


>gi|281178820|dbj|BAI55150.1| exonuclease III [Escherichia coli SE15]
 gi|330911554|gb|EGH40064.1| exodeoxyribonuclease 3 [Escherichia coli AA86]
          Length = 268

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPISVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|121635466|ref|YP_975711.1| exodeoxyribonuclease III [Neisseria meningitidis FAM18]
 gi|120867172|emb|CAM10939.1| exodeoxyribonuclease III [Neisseria meningitidis FAM18]
 gi|325132946|gb|EGC55623.1| exodeoxyribonuclease III [Neisseria meningitidis M6190]
 gi|325138934|gb|EGC61484.1| exodeoxyribonuclease III [Neisseria meningitidis ES14902]
 gi|325142997|gb|EGC65353.1| exodeoxyribonuclease III [Neisseria meningitidis 961-5945]
 gi|325198917|gb|ADY94373.1| exodeoxyribonuclease III [Neisseria meningitidis G2136]
          Length = 256

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVH-----IGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMARHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +                    
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWFQNLLDLGLTDSLRHIHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RVDLDTRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|78212211|ref|YP_380990.1| exodeoxyribonuclease III [Synechococcus sp. CC9605]
 gi|78196670|gb|ABB34435.1| exodeoxyribonuclease III [Synechococcus sp. CC9605]
          Length = 288

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 87/315 (27%), Gaps = 63/315 (20%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++    +    V++ +WN+N                   +    +  +      D++ LQ
Sbjct: 1   MLRVFDATESTVQIATWNVN----------------SVRTRLDQVLSWLDREQPDLLCLQ 44

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E    +++                +             +  +A+  +      +   +  
Sbjct: 45  ETKVDDSL----------FPVEAFKSAGWHVHIHGQKAYNGVALISREPLEDVRCGFVGE 94

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D         A + ++      + VL++++ +   L S +  Y             LK
Sbjct: 95  LPDDAEADDL-GAQKRVISALLSGVRVLNLYVPNGSSLKSEKYPYK------LTWLGCLK 147

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTIDP--NDSLIRFP 238
            ++  +++   P  + GDFN  +                 +D   + +     D L    
Sbjct: 148 RYLDAQQQRGEPLCMVGDFNIGLEARDLPDPDRQTGGIMASDAERQALRDALGDRLQDVF 207

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +  +           +           ID+  +                           
Sbjct: 208 RVFEPDSGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSCVIH-------KGMRGN 260

Query: 290 KRLSDHCPISIDYDF 304
           ++ SDH P+S+D D+
Sbjct: 261 QQPSDHAPVSVDLDW 275


>gi|117919951|ref|YP_869143.1| exonuclease III [Shewanella sp. ANA-3]
 gi|117612283|gb|ABK47737.1| Exodeoxyribonuclease III [Shewanella sp. ANA-3]
          Length = 270

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 85/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 S    L+    +   DI+ LQE        + 
Sbjct: 1   MKIVSFNINGL----------------RSRLHQLQALIDSHQPDIIGLQE---TKVHDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP        +    + +         H  +A+  K   +  Q       +D    A  R
Sbjct: 42  FP-------LAEVEAMGYHVHYHGGKAHYGVAMLSKVAPLKVQKGFATDEED----AQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG  + VL+       F       +        +  Q L   +     +  
Sbjct: 91  MIIGTFAQANGHPLTVLN-----GYFPQGESIDHPTKYPAKRKFYQDLMAHLHANHSNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQGWGLVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            RC        +           ID  +   +    L++        + D       + S
Sbjct: 206 DRCERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYELRGIDKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|325272311|ref|ZP_08138717.1| exonuclease III [Pseudomonas sp. TJI-51]
 gi|324102557|gb|EGB99997.1| exonuclease III [Pseudomonas sp. TJI-51]
          Length = 270

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/313 (10%), Positives = 80/313 (25%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V +NIN L                 +    L    +    D++ LQE    +     
Sbjct: 1   MKIVCFNINGL----------------RARPHQLAALIEKHQPDVIGLQETKVSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+  +   +          +D+      R
Sbjct: 41  ------QFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLHKGFAGDEEDA-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     +  G  I +++       F       +        +    L+  +  +  + 
Sbjct: 90  RFIWGTFADAQGNPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQVLLESQFRND 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
            P ++ GD N                        ++L    ++ + +     +  F    
Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +        +            D      +
Sbjct: 205 PDVNDRFSWFDYRSRGFEDEPKRGLRIDLIMASHALVPRIKAAGV-------DYELRGME 257

Query: 291 RLSDHCPISIDYD 303
           + SDH PI ++  
Sbjct: 258 KPSDHAPIWLELS 270


>gi|73541781|ref|YP_296301.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
 gi|72119194|gb|AAZ61457.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
          Length = 284

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 84/306 (27%), Gaps = 53/306 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI      +G    +  + R+ +    +       DAD++ LQE+       +  P
Sbjct: 3   LISWNIQWGRGADG----RVDLSRSVATMRAMA------DADVICLQEVTRGFGELRGAP 52

Query: 86  KNTWCIFYSTERLINH--------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                   S                             +  +        + L    D  
Sbjct: 53  GADQVSELSALLPGYRLLFAPGVDRFGSDGGPRQFGNLIATRLPVHEVFRHALPWPADPD 112

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             +  R A+E  ++   + + V+  HL+ +    S     + + +L    A+     +  
Sbjct: 113 VASMPRVAIEATLQAGSRPLRVICTHLEYY----SAHQRAAQANALRDWHAEACGHALRP 168

Query: 198 KKESLVP-----------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            +    P            V+ GDFN K + +          D                +
Sbjct: 169 GRSESTPGPFTPAVRPTEAVLCGDFNSKPDDIAYRRMLEPFDDDTTPWRDAWMHIHPGQS 228

Query: 247 ANK---------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                               D+  + +N  + + +   +    +           SDH P
Sbjct: 229 HAPTCAMYDKEQWPEPPFACDFVFVTENLAERVRRCEVNAATKD-----------SDHQP 277

Query: 298 ISIDYD 303
           I +  D
Sbjct: 278 IVLSLD 283


>gi|330817688|ref|YP_004361393.1| Exodeoxyribonuclease III Xth [Burkholderia gladioli BSR3]
 gi|327370081|gb|AEA61437.1| Exodeoxyribonuclease III Xth [Burkholderia gladioli BSR3]
          Length = 258

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 82/303 (27%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +     AD++ LQE+   +     
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLATSHADVLCLQELKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  ++  +      ++     F     R
Sbjct: 41  ------KFPKADLEAAGYRSWFTGQKTYNGVAILVRD-TLGVDETDVVKNIPGFEDPQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + ++  +  +    DS +  Y        Q    L+ W+  +     
Sbjct: 94  VIAATV-----NGVRIVSAYFPNGQAPDSEKFVYK------LQWLDALRAWLKDELTRHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAALLEMGFVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++       L            D +    ++ SDH P+  
Sbjct: 203 WWDYRMMGFRRNAGLRIDHILLSPALAGTLTACEV-------DRVPRTWEQPSDHTPVIA 255

Query: 301 DYD 303
             +
Sbjct: 256 TIE 258


>gi|323978068|gb|EGB73154.1| exodeoxyribonuclease III [Escherichia coli TW10509]
          Length = 268

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q      ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLADCCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|238754917|ref|ZP_04616267.1| Exodeoxyribonuclease III [Yersinia ruckeri ATCC 29473]
 gi|238706928|gb|EEP99295.1| Exodeoxyribonuclease III [Yersinia ruckeri ATCC 29473]
          Length = 268

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 81/310 (26%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +         H  +A+  K   +  +       +D+      R
Sbjct: 42  FP-------LEEVSQHGYHVFYHGQKGHYGVALLTKQKPLAVRRGFPTDEEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       ++  Q L++++ Q+     
Sbjct: 90  RIIMADLATPQGTLTVIN-----GYFPQGESRDHPTKFPAKARFYQDLQNYLAQELTPEA 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                               ++ + +     +  F     
Sbjct: 145 QVLIMGDINISPTDRDIGIGEDNRKRWLRTGKCSFLPEEREWLERLQNWGLVDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  +   +  I           D      ++ S
Sbjct: 205 DCEDRYSWFDYRSRGFDENRGLRIDVLMASKPLAERCIATGI-------DYDIRSMEKPS 257

Query: 294 DHCPISIDYD 303
           DH P+  ++ 
Sbjct: 258 DHAPVWSEFS 267


>gi|87122253|ref|ZP_01078135.1| exodeoxyribonuclease III [Marinomonas sp. MED121]
 gi|86162396|gb|EAQ63679.1| exodeoxyribonuclease III [Marinomonas sp. MED121]
          Length = 274

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 84/312 (26%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    + +  K    DI+ LQE+       ++
Sbjct: 1   MKIVSFNINGL----------------RARPHQIEELVKRQSPDIIGLQEI---KVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +             +         H  +A+  K   V  +       +D+      R
Sbjct: 42  FPHDIPQSI-------GYHAYYYGQKSHYGVAIFSKEEAVKVEYGFPNDEEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +      +   + V++       F       +        +    L +++        
Sbjct: 90  RMIIATFNTDKGPLKVIN-----GYFPQGENIEHETKFPAKQKFYADLMNYLANHVA-DE 143

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               +++  ++       + +   
Sbjct: 144 QVIVMGDINISPTDLDIGIGPQNAKRWLKTGKCSFQPIEREWYAKLEDWGLTDTYRQLNP 203

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
            + +       +             ID  +   N    L          + +      ++
Sbjct: 204 GKTDRYSWFDYRSKGFDDEPKRGLRIDVIMASNNLLPLLQDS-------DVNYDIRGMEK 256

Query: 292 LSDHCPISIDYD 303
            SDH PI  D++
Sbjct: 257 PSDHAPIWSDFE 268


>gi|327541576|gb|EGF28107.1| secreted protein containing Endonuclease/exonuclease/phosphatase
           domain [Rhodopirellula baltica WH47]
          Length = 284

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 81/285 (28%), Gaps = 30/285 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + +R+V++NI  L      S               L       D DI+   E  S   
Sbjct: 29  SPKPLRVVAYNIYNLKGWPSQSSLAQQAVARGQMAKRLAMELALYDPDIINFSESPSEKL 88

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             ++                NH +  S  +    +  + K              K+ F+R
Sbjct: 89  TKEIAELLGM----------NHVRFPSGGNWPGTLLSKSKISDPQNVPMNGERPKELFTR 138

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  VEL    N + + V   HL                  +  ++ + + + +    
Sbjct: 139 HWGRALVEL---PNDEPLIVHSAHLYPTPEPT-----------IRLKEIRAMIESMKSDL 184

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +S    ++ GD N   +                 +  F K  +      K    +  IDY
Sbjct: 185 DSGRSMLLIGDLNHSPDTDEYKLWI-----DAGWIDTFAKVGEGNGFTIKADNPEWRIDY 239

Query: 260 FVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   K +       E  +  ++   +   LSDH P    +D
Sbjct: 240 VFATGPIAKRVSESRPLFEGAFRVNNEDEKSYALSDHLPQFAVFD 284


>gi|161486214|ref|NP_754044.2| exonuclease III [Escherichia coli CFT073]
          Length = 268

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 83/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +    S  +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFSAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|91774528|ref|YP_544284.1| exodeoxyribonuclease III [Methylobacillus flagellatus KT]
 gi|91708515|gb|ABE48443.1| Exodeoxyribonuclease III [Methylobacillus flagellatus KT]
          Length = 255

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 86/302 (28%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L+                     +  +      D++ LQE    ++    
Sbjct: 1   MKLATWNVNSLN----------------VRLPQVLDWIAVEKPDVLCLQETKQEDS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   +   ++   S    +  +A+   +                      +
Sbjct: 41  ------KFPFDALKEAGYNAVHSGQKTYNGVAILSPHEIEDV------TYGIPGLNDEQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R V   +      I ++  ++ +   LDS +  Y           + L  ++  +  +  
Sbjct: 89  RLVAATIN----DIRIVCAYIPNGQSLDSDKYQYK------LGWLEALTAYLKTELAAHP 138

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
              + GD+N        +D      + +                L    +  D   ++  
Sbjct: 139 KLALLGDYNIAPEDRDVHDPVAWAGQVLVSEPERAAFRAIMALGLHDGFRLFDQEPDSFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++ +      ++          D    + +R SDH P+ +
Sbjct: 199 WWDYRMAGFRRNLGLRIDHILVSEALKSECMRCWI-------DKGPRKLERPSDHTPVVL 251

Query: 301 DY 302
             
Sbjct: 252 QL 253


>gi|254447579|ref|ZP_05061045.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015]
 gi|198262922|gb|EDY87201.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015]
          Length = 261

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 88/305 (28%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N+L                      +  + +  + D++ LQE          
Sbjct: 1   MKIASWNVNSL----------------KVRLPYVLDWLEQTNTDVLCLQE---TKLTDDK 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +    S    +  +A+  K       S   +           R
Sbjct: 42  FPDL-------AIEEAGYEVAFSGQKTYNGVAILLKK---NAASLRDVVTDVPGLVDPQR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V+D+++ +   + S +  Y           + + D+I Q+ +   
Sbjct: 92  RIMAATI----GDVRVIDLYVVNGKEVGSDKYDYK------LHWLKKVGDYIEQQSQQYE 141

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GDFN         D                  K I  N     F +  +      
Sbjct: 142 KLIVLGDFNIAPEDEDVYDPIAWSEKILCSTPERDALKRIKDNGLKDCF-RMLNQDSGEY 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +  +   K L            D     G++ SDH P+ 
Sbjct: 201 SWWDFRTKGFENGRGLRIDLILASEALQKVLKGCWI-------DRQPRAGEKPSDHAPVV 253

Query: 300 IDYDF 304
            ++ +
Sbjct: 254 AEFTY 258


>gi|319761678|ref|YP_004125615.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans
           BC]
 gi|330823549|ref|YP_004386852.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans
           K601]
 gi|317116239|gb|ADU98727.1| Endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans
           BC]
 gi|329308921|gb|AEB83336.1| Endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans
           K601]
          Length = 253

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 87/292 (29%), Gaps = 53/292 (18%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A  +  +R+ ++NI+           +        +   L    + LDADIV LQE+  
Sbjct: 7   PAEHSGILRVATYNIH--------KGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRK 58

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPL 130
            N   +      W      E L                      A+  +   V  Q    
Sbjct: 59  MN-HKEAAYFKRWPRVPQAEYLAPEGYAAVYRTNAYTRHGEHGNALLTRWPVVGHQH--- 114

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                S  R   R  + + VE+ G+ +  + +HL                     +Q + 
Sbjct: 115 --EDISDHRFEQRGLLHVEVEVQGRCVHAIVVHLGLIPGS-------------RVRQVER 159

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L+ +I ++  +  P V+AGDFN         D   +          +  +   +      
Sbjct: 160 LQRFIAREVPAGAPLVVAGDFN---------DWGLQIKHMLAGFGLYEYDDAPQAFTYPA 210

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +D+  +       L                    R+SDH P+  ++
Sbjct: 211 RLPLVQLDHVYVRG-----LTPLGLQVPRGRI------WWRMSDHLPLIAEF 251


>gi|254718977|ref|ZP_05180788.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13]
 gi|265983967|ref|ZP_06096702.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13]
 gi|264662559|gb|EEZ32820.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13]
          Length = 260

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 87/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L+ + +    DIV LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLPGDDSDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V+ ++L +   +D+ +  Y  S        Q L++W  ++     
Sbjct: 92  --IEGVYSTDNGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKERLTLEE 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249
           P V+AGD+N      +           +             N       +          
Sbjct: 144 PLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A    I  +  + +          ++ SDH P+++
Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256

Query: 301 DY 302
             
Sbjct: 257 TL 258


>gi|191171643|ref|ZP_03033190.1| exodeoxyribonuclease III [Escherichia coli F11]
 gi|190907973|gb|EDV67565.1| exodeoxyribonuclease III [Escherichia coli F11]
          Length = 268

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE   ++ +   
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQETKVHDVM--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++        H  +A+  K   +  +                R
Sbjct: 42  -------FPLEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|254252251|ref|ZP_04945569.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
 gi|124894860|gb|EAY68740.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
          Length = 290

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 86/312 (27%), Gaps = 50/312 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74
           +    +RL+ WNI    + +G+      + RT +D   L  +      D++ LQE+    
Sbjct: 2   TGGPTMRLIDWNIQWGRDADGIVD----LSRTVADARRLGDF------DVLCLQEVTRGF 51

Query: 75  ------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                    +  A++                               A+  +         
Sbjct: 52  GSLPGGPGADQFAELAALLPGYTIIDAIGADLPGAEPGAPRRQFGNAIATRLPVARVLRQ 111

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            L    D+ + +  R A+++ +      + V+  HL+ +            +     ++A
Sbjct: 112 LLPWPADADTPSMPRVALDVELHTASGPLRVVTTHLEFYSARQ--RIAQVDTLRERHREA 169

Query: 189 QWLKDWITQKKESLVPFV---------IAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-- 237
                     + +  PF+         + GDFN                D    +  +  
Sbjct: 170 CAHAARPAPAENADGPFIATGQPRDAIVCGDFNSAFGSDAYRRFLEPIADAPRFVDAWVA 229

Query: 238 ------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                 P       +  +     +  D+  +       + +                  R
Sbjct: 230 CHAGHTPPPTAGVYDTAQWSDGPLACDFVFVTDTLLSRVKRCEI-----------DGDVR 278

Query: 292 LSDHCPISIDYD 303
            SDH PI ++ D
Sbjct: 279 ASDHQPIVLELD 290


>gi|301113944|ref|XP_002998742.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112043|gb|EEY70095.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 525

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 92/320 (28%), Gaps = 49/320 (15%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           C+A+ +   R++S+N+   +    V        +       L ++ K   ADI+  QE+ 
Sbjct: 221 CSAAPSGP-RILSYNVWNTNPSSDVYGAGRRWDQYAKRLDHLVEFVKEAQADIIGFQEVR 279

Query: 76  ---------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                    ++  V  +  +     +     +   + R  +  I    ++  +   V   
Sbjct: 280 YDGVFGDPANHAQVKHLADRLPGYQYVYQAAMSYINSRMPHERIEEGPSILSRYPVVATD 339

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
              L    +  + +  R  +  +V+     +I V   HL               S S  S
Sbjct: 340 YLLLSRDPNDPNDSHQRLCLHAVVDYPRWGEIDVYVTHL---------------SLSERS 384

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDP 230
           ++   ++ W   ++      V+ GD N +   LG                  D W  +  
Sbjct: 385 REQTKVEIWEYMRQGKGKTQVLLGDLNSEPQSLGIRFLSGQAELLGQTTDMKDAWLEVHK 444

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR-- 288
                    +         +      ID+ +          +    E   +  D      
Sbjct: 445 EAKPRSTDPDDRQHKFTFPSDNPSKRIDFVLYRGEGRVKECEIIGQEPTKDTKDFPDDVG 504

Query: 289 ------GKRLSDHCPISIDY 302
                     SDH  +  ++
Sbjct: 505 MLHASSPVYASDHRGVIAEF 524


>gi|254487256|ref|ZP_05100461.1| exodeoxyribonuclease III [Roseobacter sp. GAI101]
 gi|214044125|gb|EEB84763.1| exodeoxyribonuclease III [Roseobacter sp. GAI101]
          Length = 260

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 81/306 (26%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ ++NIN                   +    L Q+      D+  LQE+         
Sbjct: 1   MKIATFNING----------------IKARIDALPQWLDEAQPDVAILQEIKTVDDAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F    + +                      +A+  K               D  +R  
Sbjct: 45  ELFEDRGYNV------------ETHGQKSFNGVAILSKRPLEDVTRGLPGDDGDEQARY- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E  V  +   I +  ++L +       +  Y        +    L+D        
Sbjct: 92  ----IEATVMGDKSAIRLCGLYLPNGNPAPGPKFDYK------LEWMARLEDRARALLAE 141

Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             PF++ GD+N                   +       W+ +        F        +
Sbjct: 142 ETPFLMTGDYNVIPQAEDAATPDAWRDDALFRPETRAAWRKLVALGLTEAFRARTQGPGH 201

Query: 247 ANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +            N I ID+F++       L            D       + SDH P+
Sbjct: 202 YSFWDYQAGAWNRNNGIRIDHFLLSPVVADMLRDCQI-------DKEIRGRDKPSDHVPV 254

Query: 299 SIDYDF 304
            +D DF
Sbjct: 255 WVDLDF 260


>gi|294788414|ref|ZP_06753657.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453]
 gi|294483845|gb|EFG31529.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453]
          Length = 256

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 87/302 (28%), Gaps = 71/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     + ++  N   D++ LQE+         
Sbjct: 1   MKIATWNVNSLN----------------VRQPQVMEWLMNEQPDVLALQELKLEQD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  +++  +   S    +  +A+  ++     Q+               R
Sbjct: 41  ------KFPLAALQMMGWNAVWSGQKTYNGVALISRHELTDVQT-----GLPQMPNDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y             L  ++  +     
Sbjct: 90  RVIVATVN----GVRVINVYCVNGEALDSPKFAYKRE------WFAALTHFVRDELARYA 139

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             V+ GDFN         D                W     +  L    +  +       
Sbjct: 140 DLVLLGDFNIAPTDEDVYDPKKWHEQIHCSSEERSWFKNLLDLGLTDGLRHANPIGKFYT 199

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++  N    L Q          D      +R SDH P+  
Sbjct: 200 WWDYRGAMFEKGLGLRIDHILVSDNLIDKLQQV-------VVDTHTRANERPSDHAPVHA 252

Query: 301 DY 302
           D+
Sbjct: 253 DF 254


>gi|291514627|emb|CBK63837.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
 gi|313156836|gb|EFR56276.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 278

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 90/312 (28%), Gaps = 44/312 (14%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M +  +  L+ F    +    Q    ++L+S+N+ T   ++G + W N            
Sbjct: 1   MKKTMLFLLLAFCFSNSVQAGQDAVSIKLISFNMRTSWGRDGDNSWPN-------RRHAT 53

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            Q  +    D++ +QE               +                   +      +R
Sbjct: 54  AQMLRQEAPDVMGVQEAMQDQLYYIDTECPRYARVGED-----RDGGAEGGETMAVFYLR 108

Query: 118 KKNVRVLQQSYPLLGAKD----SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLD 171
            +   +   ++ +    D     +  A NR    + +    +GK+ +  + HL     + 
Sbjct: 109 DRFELLDSGTFWISETPDNVSRGWDAACNRTVTWVELRDKSSGKEFFYFNTHLDHQGKI- 167

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                         +  + +   I Q        ++ GD N  I+           +  +
Sbjct: 168 -----------AREEGVKLIVTKIRQIAGKKAAVILGGDLNTSIDNPHLKP--LTRLMAS 214

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                   ++    N   +  + I +D+                    +   D       
Sbjct: 215 ARDTAAETDQKGTFNGFGSAPDTIILDHLFYRGRMKCR---------KFVTLDGDYGAPY 265

Query: 292 LSDHCPISIDYD 303
           +SDH PI++ + 
Sbjct: 266 ISDHYPIAMVFT 277


>gi|290475444|ref|YP_003468332.1| exonuclease III [Xenorhabdus bovienii SS-2004]
 gi|289174765|emb|CBJ81566.1| exonuclease III [Xenorhabdus bovienii SS-2004]
          Length = 268

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 80/310 (25%), Gaps = 75/310 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE        ++
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIVEQHQPDVIGLQE---TKVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  +   V  +        D+      R
Sbjct: 42  FP-------LEEVSKLGYHIFYHGQKSHYGVALLTRQQPVTVRKGFPTDDDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E     + +++       F       +        +  Q L  ++ + +    
Sbjct: 90  RIIMADIETPQGLMTIIN-----GYFPQGESREHPVKFPAKEKFYQDLNRYLEKNQSPDS 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
             +I GD N                               +   + +     +  F  + 
Sbjct: 145 HILIMGDMNISPTDLDIGIGENNQKRWLKTGKCSFLPEEREWMGR-LKDWGLIDTFRAQH 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  +   +  +           D      ++ 
Sbjct: 204 PEASDQFSWFDYRSKGFDDNRGLRIDLLLASRPLAERCLSSGI-------DYAIRSMEKP 256

Query: 293 SDHCPISIDY 302
           SDH P+  ++
Sbjct: 257 SDHAPVWAEF 266


>gi|307544063|ref|YP_003896542.1| hypothetical protein HELO_1474 [Halomonas elongata DSM 2581]
 gi|307216087|emb|CBV41357.1| K07004 [Halomonas elongata DSM 2581]
          Length = 1608

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 87/331 (26%), Gaps = 64/331 (19%)

Query: 23   KVRLVSWNINTLSEQEGVSLWK--------------NSVKRTTSDYTLLRQYAKNLDADI 68
             +++ S+N+         +                 NS    T     +       DADI
Sbjct: 1280 SLKVASFNVLNYFTTLDENGNSVVTPAGTEHDPRGANSSLELTRQQDKIVSAINGSDADI 1339

Query: 69   VFLQEMGSYNAVAKVF-----------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            V L E+ +                     +    + +      ++    ++ I   +  +
Sbjct: 1340 VGLMEIENNGYGDDSAIAHLVEALNADDADAGWAYVTPTDAEGNTVAPGSDAIAVGMIYK 1399

Query: 118  KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLEN 175
              +V     +               R  +      + +G+   V   H KS   + + + 
Sbjct: 1400 STSVTPEGHAAVDASGVFETGN---RPPMLQTFREDASGETFSVAVNHFKSKGSVINGQE 1456

Query: 176  T----YSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTID 229
                    +  +  + A+ L DW+            ++ GDFN   N           ++
Sbjct: 1457 AIGDGQGNNNPIRVEAAKQLADWVASDPTDSGDSDTLLIGDFNSYANEDPI-----TALE 1511

Query: 230  PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
             +   +           +         +D+ +  ++    +   +   I  +E       
Sbjct: 1512 DDGYTLLDDD------YSYSYDGQWGSLDHALASESMNAQVTGTTTWHINADEPTSFDYN 1565

Query: 290  -----------------KRLSDHCPISIDYD 303
                              R SDH PI +  D
Sbjct: 1566 TEYKSDDQVDAYYDDGPYRASDHDPIVVGVD 1596


>gi|240949558|ref|ZP_04753897.1| exonuclease III [Actinobacillus minor NM305]
 gi|257465617|ref|ZP_05629988.1| exonuclease III [Actinobacillus minor 202]
 gi|240295999|gb|EER46665.1| exonuclease III [Actinobacillus minor NM305]
 gi|257451277|gb|EEV25320.1| exonuclease III [Actinobacillus minor 202]
          Length = 267

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 86/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +   +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKHQPDVIGLQEIKVADEDFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     + +F+                 H  +A+  K   +  +      A+D+  R  
Sbjct: 45  DLVNHLGYHVFHH------------GQKGHYGVALLTKKAPLAVRKGFPTDAEDAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + VL+       F      ++       ++    L+ ++  + + 
Sbjct: 91  ---MIMADIETEFGTLTVLN-----GYFPQGENRSHETKFPAKAKFYADLQHYLENQLKP 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N                          L    ++   +     +  F   
Sbjct: 143 ENPIIIMGDMNISPTDLDIGIGEANRKRWLRDGKCSFLPEEREWLDRLYGYGLVDTFRAM 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +  ++  +  ++          D      ++
Sbjct: 203 NPLAADKFSWFDYRSKGFDDNRGLRIDLVLASKSLAERCVETGI-------DLEIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH P+   +
Sbjct: 256 PSDHSPVWAVF 266


>gi|238063778|ref|ZP_04608487.1| exodeoxyribonuclease III Xth [Micromonospora sp. ATCC 39149]
 gi|237885589|gb|EEP74417.1| exodeoxyribonuclease III Xth [Micromonospora sp. ATCC 39149]
          Length = 271

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 77/306 (25%), Gaps = 71/306 (23%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A+ +RL +WN+N                   +    L  +      D+V LQE    + 
Sbjct: 3   QARGMRLATWNVN----------------SVKARLPRLLDWLATTGPDVVCLQETKCPDG 46

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                         +    + ++    ++     +A+  +              +  F  
Sbjct: 47  A----------FPVAEVGELGYTVASHSDGRWNGVAILSRAGLADVTVG--FPGEPGFPE 94

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      +      + V  +++ +          Y  +          L+D + Q+ 
Sbjct: 95  PEARA-----ISATCAGLRVWSVYVPNGRAPGDPHYAYKLA------WFAALRDALEQEL 143

Query: 200 ESLVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSR 244
              +P  + GDFN                         D    +   +     P      
Sbjct: 144 TGGLPLAVCGDFNVAPTDADVWDPALFATSTHVTPAERDALAALRDLELSDVVPTPMKGP 203

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +       +         + ID         + +            D    +GK  SDH
Sbjct: 204 -HPYTYWDYRAGMFHQNKGMRIDLVYASAPFARAVRAAYV-------DREARKGKAPSDH 255

Query: 296 CPISID 301
            P+ +D
Sbjct: 256 APVVVD 261


>gi|307311330|ref|ZP_07590973.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti
           BL225C]
 gi|307318863|ref|ZP_07598295.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83]
 gi|306895584|gb|EFN26338.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83]
 gi|306899631|gb|EFN30259.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti
           BL225C]
          Length = 368

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 117/366 (31%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLLRQY------------ 60
            +RL ++NI  L  +   S ++N +K          R+ ++Y  L +             
Sbjct: 2   SLRLATFNIENLMSRFDFSGFRNQLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDTRQM 61

Query: 61  ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                 + DADI+ LQE  +  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  SALAIADCDADILCLQEADNMAALQAFEYGYLFRMAGNGYRQKYLVEGNDSRGIDVAVLM 121

Query: 117 RK------KNVRVLQQSYPLLGAKDSF-------------SRAGNRRAVELLVEINGKKI 157
           R+      K   +  +S+  L  +D                R   R  +E+ V I G+ +
Sbjct: 122 REETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV----PFVIAGDFNR 213
            +  +HLKS        +    + ++   + + ++  I ++          F I GD N 
Sbjct: 182 TLYVVHLKSMGPAREGLDGRQATMAVRIAEVKAVRHIIERRFGRGHTADKVFAICGDMND 241

Query: 214 ---KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------------- 254
              K+  LG+  + ++ +   ++              N NLR                  
Sbjct: 242 YQEKVKVLGDRRNGYEFLPHEETTSALDVLSHDGFVENPNLRRPVLDRWTLFHSRGPEDR 301

Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILY---------------NEDDIKSRGKRLSDHCP 297
               +DY  +     +         I                           + SDHCP
Sbjct: 302 HLCQLDYIWLSPELARRNAARLPEIIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 VVMTLD 367


>gi|325280301|ref|YP_004252843.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM
           20712]
 gi|324312110|gb|ADY32663.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM
           20712]
          Length = 351

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 90/342 (26%), Gaps = 50/342 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKV-RLVSWNINTLSEQ-------EGVSLWKNSVKRTTSD 53
             K +  L    V     VAQ   R++ +N+  L +        +     +     T + 
Sbjct: 17  KMKLLGILFLLCVLTMPVVAQDHCRIMFYNVENLFDTADDPSTADDEFTPRGKKHWTKAK 76

Query: 54  YT----LLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
           YT     + +   ++       IV L E+ +   +  +               I H    
Sbjct: 77  YTDKLLKIAEVIDSVGDKELPCIVGLAEVENRWVLEDL---TQKTALADGNYGIVHQDSP 133

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
               I  A+  RK    +L+  +  L      +    R  +     ++   +     H  
Sbjct: 134 DRRGIDVALLYRKDCFELLETDFLRLSFP-EDTTIRTRDILYASGVLDSDTLHFFVCHFP 192

Query: 166 SFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
           S    +         + S +  +   L        +S    VI GD N K N        
Sbjct: 193 SMIGGEKQSEWRRERAASTVRHKVDSLLA-----VQSRAGIVIMGDLNGKANTPAQKVLG 247

Query: 225 WKTIDP----NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFS 276
            K+ D      D              + +   N   ID+ ++          +      +
Sbjct: 248 TKSSDKKPRCKDLYNTGYYLLKKNYGSYRYKGNWQTIDHLILSGALLDGHSVWKADRRLT 307

Query: 277 EILYN----------------EDDIKSRGKRLSDHCPISIDY 302
               +                           SDH PI ID 
Sbjct: 308 VFSASFLLEEDKTYFGYKPCPTYRGPRYVGGYSDHLPIYIDL 349


>gi|121611360|ref|YP_999167.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2]
 gi|121556000|gb|ABM60149.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2]
          Length = 258

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 84/301 (27%), Gaps = 68/301 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+LS                     +  +      D + LQE+   +     
Sbjct: 1   MKIATWNVNSLS----------------VRLPQVLAWLAANPVDALCLQELKLSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++  +   +         +  +A+  ++         +    D  +R    
Sbjct: 41  ------KFPHAALQAAGYDAVALGQKTYNGVAILSRHRLNAVVRN-IPDFGDEQAR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++     + +L+ +  +     S +  Y        +  Q L+D +  +  +  
Sbjct: 90  -VIAATLDSPLGPLRLLNGYFVNGQEPGSEKFAYK------LRWLQALQDMVRAELAAHP 142

Query: 204 PFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNANK 249
             V+AGDFN       + D                         L    +  +    +  
Sbjct: 143 RLVLAGDFNVAPQDRDSYDPEGLRETIHHTSAERAHFQALLALGLADAFRMFEQPGKSYS 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++       +            D    +  + SDH P+ +
Sbjct: 203 WWDYRMLGFQKNRGLRIDHILVSAALRPAVSACMI-------DRAPRKNPQPSDHAPVVL 255

Query: 301 D 301
            
Sbjct: 256 T 256


>gi|83645532|ref|YP_433967.1| exonuclease III [Hahella chejuensis KCTC 2396]
 gi|83633575|gb|ABC29542.1| exodeoxyribonuclease III [Hahella chejuensis KCTC 2396]
          Length = 270

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 82/312 (26%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+N+N                   S    L++       DI+ LQE      + ++
Sbjct: 1   MRIVSFNVNG----------------VRSRLHQLKELISQYQPDIIGLQE---TKVIDEL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  K   +          +++  R    
Sbjct: 42  FP-------LEAINEMGYQAEYYGQKGHYGVALLSKQPALRCFKGFEGDGEEAHKRW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +     + G+ + V +       F      ++        +      D++ Q+     
Sbjct: 92  --IVGEYAVGGQTLVVCN-----GYFPQGENRSHPDKFPNKQRFYAGTLDFLQQR-SPDQ 143

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
           P V+ GD N                               ++   +     +  F +   
Sbjct: 144 PIVVMGDMNVSHTDSDIGIGEENRKRWLRTGKCSFLPEEREWLNRLLDWGLVDTFRQHFP 203

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +  Q      +                  ++
Sbjct: 204 DVKDRYSWFDYRSRGFEDNPKRGLRIDLILATQPLAARCVDAGV-------SYEIRSMEK 256

Query: 292 LSDHCPISIDYD 303
            SDHCPI  D+D
Sbjct: 257 ASDHCPIWADFD 268


>gi|71279793|ref|YP_269869.1| exonuclease III [Colwellia psychrerythraea 34H]
 gi|71145533|gb|AAZ26006.1| exodeoxyribonuclease III [Colwellia psychrerythraea 34H]
          Length = 268

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 81/310 (26%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        DI+ LQE+  ++     
Sbjct: 1   MKIISFNINGL----------------RARLHQLQAIIDKHQPDIIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K      Q     G       A  R
Sbjct: 42  -------FPLEAVEAMGYHVYFHGQKAHYGVAMLCKKEAESVQR----GFPTDDDEAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +       G+K+ VL+       F      ++        +  + L  ++     +  
Sbjct: 91  MIMVTTTNDKGEKVTVLN-----GYFPQGENISHETKYPYKRKFYKDLMTYLNDNHVNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++     ++   +     +  F +   
Sbjct: 146 NVVVMGDINISPQDLDIGIGDVNSKRWLKSGKCSFQPEEREWLTRLMDWGFVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +  +N  +         I  + D      ++ S
Sbjct: 206 DTTERYSWFDYRSRGFDDNRGLRIDVVLATKNMAEQC-------IEADIDYELRAIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 259 DHAPIWSTFS 268


>gi|15802160|ref|NP_288182.1| exonuclease III [Escherichia coli O157:H7 EDL933]
 gi|15831709|ref|NP_310482.1| exonuclease III [Escherichia coli O157:H7 str. Sakai]
 gi|168749430|ref|ZP_02774452.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4113]
 gi|168756758|ref|ZP_02781765.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4401]
 gi|168762180|ref|ZP_02787187.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4501]
 gi|168770517|ref|ZP_02795524.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4486]
 gi|168774945|ref|ZP_02799952.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4196]
 gi|168782171|ref|ZP_02807178.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4076]
 gi|168788152|ref|ZP_02813159.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC869]
 gi|168800064|ref|ZP_02825071.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC508]
 gi|195937435|ref|ZP_03082817.1| exonuclease III [Escherichia coli O157:H7 str. EC4024]
 gi|208810770|ref|ZP_03252646.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4206]
 gi|208816750|ref|ZP_03257870.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4045]
 gi|208821646|ref|ZP_03261966.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4042]
 gi|209395934|ref|YP_002270819.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4115]
 gi|217328604|ref|ZP_03444685.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. TW14588]
 gi|254793367|ref|YP_003078204.1| exonuclease III [Escherichia coli O157:H7 str. TW14359]
 gi|261227757|ref|ZP_05942038.1| exonuclease III [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258078|ref|ZP_05950611.1| exonuclease III [Escherichia coli O157:H7 str. FRIK966]
 gi|291282928|ref|YP_003499746.1| Exodeoxyribonuclease III [Escherichia coli O55:H7 str. CB9615]
 gi|12515771|gb|AAG56735.1|AE005398_1 exonuclease III [Escherichia coli O157:H7 str. EDL933]
 gi|13361922|dbj|BAB35878.1| exonuclease III [Escherichia coli O157:H7 str. Sakai]
 gi|187769420|gb|EDU33264.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4196]
 gi|188016211|gb|EDU54333.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4113]
 gi|189000291|gb|EDU69277.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4076]
 gi|189356216|gb|EDU74635.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4401]
 gi|189360591|gb|EDU79010.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4486]
 gi|189367497|gb|EDU85913.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4501]
 gi|189372068|gb|EDU90484.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC869]
 gi|189377552|gb|EDU95968.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC508]
 gi|208725286|gb|EDZ74993.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4206]
 gi|208731093|gb|EDZ79782.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4045]
 gi|208741769|gb|EDZ89451.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4042]
 gi|209157334|gb|ACI34767.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4115]
 gi|209768548|gb|ACI82586.1| exonuclease III [Escherichia coli]
 gi|209768550|gb|ACI82587.1| exonuclease III [Escherichia coli]
 gi|209768552|gb|ACI82588.1| exonuclease III [Escherichia coli]
 gi|209768554|gb|ACI82589.1| exonuclease III [Escherichia coli]
 gi|209768556|gb|ACI82590.1| exonuclease III [Escherichia coli]
 gi|217317951|gb|EEC26378.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. TW14588]
 gi|254592767|gb|ACT72128.1| exonuclease III [Escherichia coli O157:H7 str. TW14359]
 gi|290762801|gb|ADD56762.1| Exodeoxyribonuclease III [Escherichia coli O55:H7 str. CB9615]
 gi|320188437|gb|EFW63099.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC1212]
 gi|320641598|gb|EFX10986.1| exonuclease III [Escherichia coli O157:H7 str. G5101]
 gi|320646958|gb|EFX15791.1| exonuclease III [Escherichia coli O157:H- str. 493-89]
 gi|320652240|gb|EFX20538.1| exonuclease III [Escherichia coli O157:H- str. H 2687]
 gi|320657841|gb|EFX25603.1| exonuclease III [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320658415|gb|EFX26109.1| exonuclease III [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668313|gb|EFX35140.1| exonuclease III [Escherichia coli O157:H7 str. LSU-61]
 gi|326342117|gb|EGD65898.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. 1044]
 gi|326343669|gb|EGD67431.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. 1125]
          Length = 268

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDEEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|260170322|ref|ZP_05756734.1| hypothetical protein BacD2_00508 [Bacteroides sp. D2]
 gi|315918686|ref|ZP_07914926.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313692561|gb|EFS29396.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 292

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 85/319 (26%), Gaps = 56/319 (17%)

Query: 2   IRKYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
            + Y L L+        + +           +RL S+NI T  ++   +           
Sbjct: 7   KKYYFLFLILLFAGELPAKSLNLDKTKPEDIIRLASYNIRTKGDKGDKA--------WEV 58

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
               L    +    D+  +QE  +      +          +    I   +   N   H 
Sbjct: 59  RLNALVDVVRRNKFDMFAIQEGRTSQLKDMM--------ILNEFSYIGRDRDGDNKGEHC 110

Query: 113 AIAVRKKNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLK 165
           AI  +K   +VL+                +     R       +    GKK +V + H  
Sbjct: 111 AIFYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKDLRTGKKFYVFNSHT- 169

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                         S  +L +Q + +            P    GDFN   +         
Sbjct: 170 ----DHEATEARRQSSFMLLEQVRKIAK--------GKPTFCTGDFNATPDEEPIQLLLK 217

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNE 282
            ++  +         K    +     + +     ID+  +                 +  
Sbjct: 218 DSLLLDSYECTLTPPKGPSGSFYAYDKTRNIAKRIDFIFVTPKIKVLS--------YHTI 269

Query: 283 DDIKSRGKRLSDHCPISID 301
           DD     K  SDH P+ ++
Sbjct: 270 DDDIKYNKYSSDHFPVMVE 288


>gi|284921668|emb|CBG34740.1| exodeoxyribonuclease III [Escherichia coli 042]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 83/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F +   
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|254472835|ref|ZP_05086234.1| endonuclease/exonuclease/phosphatase [Pseudovibrio sp. JE062]
 gi|211958299|gb|EEA93500.1| endonuclease/exonuclease/phosphatase [Pseudovibrio sp. JE062]
          Length = 289

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 88/310 (28%), Gaps = 55/310 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-------- 75
           +++VS+NI   +  +G             D   +        ADI+ LQE+         
Sbjct: 1   MKIVSYNIQYGTGIDG-----------KVDLARIAGEL--EGADIIGLQEVDRFWKRNGN 47

Query: 76  --SYNAVAKVFPKNTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                 +A +     W             + + +  N        +  K   +  ++YPL
Sbjct: 48  VDQAAELADLLGGYRWVYGPGLDMDASFHDENGKLVNRRRQHGEMILSKYPIISTRTYPL 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--SPSCSLLSQQA 188
                    A     +E +++  G  + V + HL  +    +L               + 
Sbjct: 108 PKMGSITRHAIQAALLEAVIDAPGGPLRVYNTHLFYWSPDFALVQAQFVRDRIKTAPSEG 167

Query: 189 QWL-------KDWITQKKESLVP--FVIAGDFNRKINYL-------GNNDDFWKTIDPND 232
                       W+  + +  +P   ++ GD N               +++  +    + 
Sbjct: 168 GAWCGGPGIDAHWLNDEPQPTMPTDCILLGDMNNGPGTPVYEVFTGPPSEEGGRVQTLDG 227

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +  +    +   +      +   ID+  +  +    +                    + 
Sbjct: 228 FVDPWVWLGNEEMSGKTAHFDTRRIDHVFVGASLRHRIAGMWV-----------DEDAKG 276

Query: 293 SDHCPISIDY 302
           SDH P+ ++ 
Sbjct: 277 SDHLPVWLEL 286


>gi|162138430|ref|YP_540952.2| exonuclease III [Escherichia coli UTI89]
 gi|170683141|ref|YP_001743499.1| exonuclease III [Escherichia coli SMS-3-5]
 gi|215486966|ref|YP_002329397.1| exonuclease III [Escherichia coli O127:H6 str. E2348/69]
 gi|218558617|ref|YP_002391530.1| exonuclease III [Escherichia coli S88]
 gi|218689690|ref|YP_002397902.1| exonuclease III [Escherichia coli ED1a]
 gi|293410066|ref|ZP_06653642.1| exodeoxyribonuclease III [Escherichia coli B354]
 gi|306814999|ref|ZP_07449155.1| exonuclease III [Escherichia coli NC101]
 gi|312966949|ref|ZP_07781167.1| exodeoxyribonuclease III [Escherichia coli 2362-75]
 gi|331663230|ref|ZP_08364140.1| exodeoxyribonuclease III [Escherichia coli TA143]
 gi|170520859|gb|ACB19037.1| exodeoxyribonuclease III [Escherichia coli SMS-3-5]
 gi|215265038|emb|CAS09425.1| exonuclease III [Escherichia coli O127:H6 str. E2348/69]
 gi|218365386|emb|CAR03109.1| exonuclease III [Escherichia coli S88]
 gi|218427254|emb|CAR08144.2| exonuclease III [Escherichia coli ED1a]
 gi|222033502|emb|CAP76243.1| exodeoxyribonuclease III [Escherichia coli LF82]
 gi|291470534|gb|EFF13018.1| exodeoxyribonuclease III [Escherichia coli B354]
 gi|294494019|gb|ADE92775.1| exodeoxyribonuclease III [Escherichia coli IHE3034]
 gi|305851647|gb|EFM52100.1| exonuclease III [Escherichia coli NC101]
 gi|307626765|gb|ADN71069.1| exonuclease III [Escherichia coli UM146]
 gi|312288413|gb|EFR16315.1| exodeoxyribonuclease III [Escherichia coli 2362-75]
 gi|312946349|gb|ADR27176.1| exonuclease III [Escherichia coli O83:H1 str. NRG 857C]
 gi|320194541|gb|EFW69172.1| Exodeoxyribonuclease III [Escherichia coli WV_060327]
 gi|323952256|gb|EGB48129.1| exodeoxyribonuclease III [Escherichia coli H252]
 gi|323956518|gb|EGB52259.1| exodeoxyribonuclease III [Escherichia coli H263]
 gi|331059029|gb|EGI31006.1| exodeoxyribonuclease III [Escherichia coli TA143]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|82776806|ref|YP_403155.1| exonuclease III [Shigella dysenteriae Sd197]
 gi|309788829|ref|ZP_07683424.1| exodeoxyribonuclease III [Shigella dysenteriae 1617]
 gi|81240954|gb|ABB61664.1| exonuclease III [Shigella dysenteriae Sd197]
 gi|308923100|gb|EFP68612.1| exodeoxyribonuclease III [Shigella dysenteriae 1617]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L         D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVDKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEDVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGERRDHPIKFPAKAQFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|34540411|ref|NP_904890.1| hypothetical protein PG0605 [Porphyromonas gingivalis W83]
 gi|34396724|gb|AAQ65789.1| hypothetical protein PG_0605 [Porphyromonas gingivalis W83]
          Length = 413

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/355 (10%), Positives = 83/355 (23%), Gaps = 63/355 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNS----------- 46
           I K ++  +   V              R++++N+  L +        +S           
Sbjct: 66  IMKTIIPSIGIAVVSGGFAPHPKPVSFRVMTYNVENLFDCYDDIGKDDSEFLPEGKLRWT 125

Query: 47  VKRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102
             R       +    K +       +V L E+ +   +  +  +               +
Sbjct: 126 QSRYNRKLKQVASVIKAVGGPDWPALVALVEVENDTVMNNLLSRTP---LGKQSYRYVMT 182

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLD 161
                  I  A+  R +   +  +    +  +   +R   R  +        G  + V  
Sbjct: 183 NSPDKRGIDVALLYRPELFSLDHKEEYRVHFRGERNR-RTRNILHAQGRLAGGDTLDVFV 241

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLG 219
            H  S             S +     A  L+    +          +I GD N   +   
Sbjct: 242 CHFPSRRGGV------RQSDAYRHDAATLLRTKCNEILSRRHNPFILIMGDLNSNPDESP 295

Query: 220 NNDDFWK--TIDPNDSLIRFPKEKDSRC-------NANKNLRNKIPIDYFVMDQNAYKFL 270
             +       +              S C                  +D+ ++  N  K  
Sbjct: 296 LIETLRAGTVLPEAGKAGAGELYNLSGCPLSQIPPGTTLYKGKWEQLDHIIVSGNFLKPD 355

Query: 271 IQESF----------------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + S+                                       SDH P++ ++ 
Sbjct: 356 SRVSYRTGSAKNVVLPYLVHSAPYNVARIAPNRTYQGMHYKGGYSDHLPVAAEFT 410


>gi|127513190|ref|YP_001094387.1| exonuclease III [Shewanella loihica PV-4]
 gi|126638485|gb|ABO24128.1| Exodeoxyribonuclease III [Shewanella loihica PV-4]
          Length = 269

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 86/306 (28%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDSHSPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   V  Q     G       A  R
Sbjct: 42  -------FPLAEVEAMGYQVHYHGGKAHYGVAMLSKLPPVKVQK----GFPTDDDEAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+++ VL+       F      ++        +  Q L  ++ Q      
Sbjct: 91  MIMGTFTQANGRQLTVLN-----GYFPQGENISHETKYPAKRKFYQDLMHYLQQHHSPDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++ +T+     +  F +   
Sbjct: 146 DIAIIGDINISPIDLDIGIGEVNAKRWLKTGKCSFQPEEREWLQTLLDWGLVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +R         +           ID  +   +  + L +        + D       + S
Sbjct: 206 TRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAERLTES-------DVDYDLRGIDKPS 258

Query: 294 DHCPIS 299
           DH PI 
Sbjct: 259 DHAPIW 264


>gi|58584011|ref|YP_203027.1| nuclease [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58428605|gb|AAW77642.1| nuclease [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 637

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 84/324 (25%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+ +       G      +       ++  +    L   
Sbjct: 321 LTLPAMPTAVAPQVGGDLRIASFKLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 380

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +    A            +         I+       + I   I 
Sbjct: 381 IVPLGADVAALMELENDGNAADAAVAQLVAALNAAGKDKDWHFIDSGSGPGADAIRVGIV 440

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +    +   G    V+  H KS  C   S 
Sbjct: 441 YRSSQVTPVGKPATLTGGPFDNH---SRVPLAQAFLSTRGATFVVVANHFKSKGCGNASG 497

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L +W+            V+ GDFN     +        
Sbjct: 498 ADADQQDGQACWNATRTESAKGLHEWLQTDPTGAQTKRAVLVGDFNAYAMEMPMRS---- 553

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +          D+ ++     K L       I  +  D  
Sbjct: 554 -LRASGWQDAFAVAGVKQPYSFVYDGMSGRQDHALLSPAMAKQLRGAVEWHINADVMDAA 612

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 613 GYAKRNLPGPWRSSDHDPVLLGFS 636


>gi|53713283|ref|YP_099275.1| hypothetical protein BF1993 [Bacteroides fragilis YCH46]
 gi|52216148|dbj|BAD48741.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 361

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 89/304 (29%), Gaps = 68/304 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ ++N+++   ++                  +  Y K    DI+  QE     A 
Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSC-----------KEIAAYMKEHRVDIICFQEF----AG 144

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F  ++    ++  +      +  ++     +A+  K      +      +++     
Sbjct: 145 NRYFTSDSIRNAFADWQYAVIP-QAPDSTPILQVALFSKYPVKDSRLITYPDSRNCS--- 200

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179
                +   +++NG+ + V + HL++     +                            
Sbjct: 201 -----MWCDLDVNGQTVRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGL 255

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +    + QA+ L+  I     +  P ++ GDFN   +    +      +        F
Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPILVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                      +  +  + IDY    +                  D         SDH P
Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLDLCSDHNP 354

Query: 298 ISID 301
           + ++
Sbjct: 355 VVME 358


>gi|75676002|ref|YP_318423.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255]
 gi|74420872|gb|ABA05071.1| Exodeoxyribonuclease III [Nitrobacter winogradskyi Nb-255]
          Length = 266

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 86/305 (28%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ +WN+N                        L  + +    D+V LQE+         
Sbjct: 1   MRIATWNVN----------------SVRQRLDHLITWLRETAPDVVCLQEIKCVDEQFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +                      +A+  K      +        D  +R  
Sbjct: 45  EAIEALGYNVVTH------------GQKTFNGVALLSKFPFDETRPRLAGDDGDVQARF- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E +V +    + V  ++L +    ++ +  Y        +    L ++  ++ +S
Sbjct: 92  ----LEGVVTLEHGAVRVACLYLPNGNPPNTEKYPYK------LKWISRLIEYSRERLKS 141

Query: 202 LVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCNA 247
              F++AGDFN          +    +D  ++              L    +        
Sbjct: 142 EEAFILAGDFNVIPAPCDVYNSAAWVDDALFRPRTRQAFQTLLGLGLTDALRAVSDAAGE 201

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   L            D      ++ SDH P+
Sbjct: 202 YTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLSGAGI-------DRHVRGWEKASDHVPV 254

Query: 299 SIDYD 303
            ID D
Sbjct: 255 WIDLD 259


>gi|302549548|ref|ZP_07301890.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467166|gb|EFL30259.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 301

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 83/301 (27%), Gaps = 38/301 (12%)

Query: 9   LVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           L+    P +++ A +    ++++++N+   +  +          R      ++R+  +  
Sbjct: 25  LLTTAGPTSSASAGEHKGALKVMTFNVRFGTVVD-------RTPRWEVRRPVMRELLRRE 77

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
              ++  QE       A          +  T R              T      +     
Sbjct: 78  RPHVIGTQEGLYRQVRAIEKDLGEHYDWIGTGRGGGSKDEFMAVFYDTRRLEPLEFDHFW 137

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
               P   A +++     R    +        G++ +VL+ HL             S S 
Sbjct: 138 LSGTPYAIASNTWGADWLRMVTWVRFADLAEGGREFYVLNTHL------------DSVSQ 185

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKE 240
               +    + + I    +  +P ++ GDFN   +     D      +            
Sbjct: 186 YARERSVGLIGETIAGW-DRSLPVIVTGDFNAGAHDNRVYDLMLDIGLVDAWDAAASRGP 244

Query: 241 KDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +  +  R     ID+ +              +      +     G   SDH P+ 
Sbjct: 245 AYGTYHGYRGPRPGGRRIDWILTTP---------GVTTHWAGMNTFSRDGTYPSDHLPVQ 295

Query: 300 I 300
            
Sbjct: 296 A 296


>gi|10957459|ref|NP_051603.1| extracellular nuclease, putative [Deinococcus radiodurans R1]
 gi|6460888|gb|AAF12592.1|AE001826_61 extracellular nuclease, putative [Deinococcus radiodurans R1]
          Length = 1067

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 89/319 (27%), Gaps = 48/319 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFLQEMGSYN 78
              +R+   N+       G S  + +            +      L+AD++ L E+ +  
Sbjct: 484 GGSLRVGGANVLNYFTTYGGSTDRGANNAGELARQRAKMATTLTTLNADVLSLMEVQNNG 543

Query: 79  --AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A+  +           T   +      ++       A++   +    +  P+      
Sbjct: 544 DTALNDLVAALNEKAGAGTYAAVTTGSVGTD-------AIKVAIIYKPSKVTPVGQFMTD 596

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKS-FCFLDSLENTYSPSC--SLLSQQAQWL 191
            +   +R  V         G    V+  HLKS      S +      C   L  +QAQ L
Sbjct: 597 NNSVFSRPPVAQTFRDKTTGGVFSVIANHLKSKGSCPTSGDVDTGQGCWNQLRVRQAQAL 656

Query: 192 KDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             ++    +K      ++ GDFN             K +          +       + +
Sbjct: 657 LGFVDTVKQKSGDQDVLLLGDFNAYGAEDPI-----KVLQGGGFESLNLRIPAEDRYSYQ 711

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------------- 289
                  +D+ +  QN    +   +   +  +E  I                        
Sbjct: 712 FNGLFGYLDHALASQNLSAQVSGITEWHVNSDEPVIADYNTEFKKVAGCTGTNCTGIDLF 771

Query: 290 -----KRLSDHCPISIDYD 303
                 R SDH P+ +  +
Sbjct: 772 DPTNPFRASDHDPVLVGLN 790


>gi|188994512|ref|YP_001928764.1| hypothetical protein PGN_0648 [Porphyromonas gingivalis ATCC 33277]
 gi|188594192|dbj|BAG33167.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 351

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/355 (10%), Positives = 83/355 (23%), Gaps = 63/355 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNS----------- 46
           I K ++  +   V              R++++N+  L +        +S           
Sbjct: 4   IMKAIIPSIGIAVVSGGFAPHPKPVSFRVMTYNVENLFDCYDDIGKDDSEFLPEGKLRWT 63

Query: 47  VKRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102
             R       +    K +       +V L E+ +   +  +  +               +
Sbjct: 64  QSRYNRKLKQVASVIKAVGGPDWPALVALVEVENDTVMNNLLSRTP---LGKQSYRYVMT 120

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLD 161
                  I  A+  R +   +  +    +  +   +R   R  +        G  + V  
Sbjct: 121 NSPDKRGIDVALLYRPELFSLDHKEEYRVHFRGERNR-RTRNILHAQGRLAGGDTLDVFV 179

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLG 219
            H  S             S +     A  L+    +          +I GD N   +   
Sbjct: 180 CHFPSRRGGV------RQSDAYRHDAATLLRTKCNEILSRRHNPFILIMGDLNSNPDESP 233

Query: 220 NNDDFWK--TIDPNDSLIRFPKEKDSRC-------NANKNLRNKIPIDYFVMDQNAYKFL 270
             +       +              S C                  +D+ ++  N  K  
Sbjct: 234 LIETLRAGTVLPEAGKAGAGELYNLSGCPLSQIPPGTTLYKGKWEQLDHIIVSGNFLKPD 293

Query: 271 IQESF----------------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + S+                                       SDH P++ ++ 
Sbjct: 294 SRVSYRTGSAKNVVLPYLVHSAPYNVARIAPNRTYQGMHYKGGYSDHLPVTAEFT 348


>gi|332558086|ref|ZP_08412408.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N]
 gi|332275798|gb|EGJ21113.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N]
          Length = 259

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 88/302 (29%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  + +  + D+V LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------VKARLEALLAWLEAAEPDVVLLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +                   +A+  +              +D  +R    
Sbjct: 42  FPR-------AAFEDKGWHLETHGQKGFNGVAILSRLPLEDVVRGLPGDPEDVQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V +  + + V  ++L +       +  Y           + +K    +   +  
Sbjct: 92  --IEATV-VGERAVRVCGLYLPNGNPAPGPKYDYK------LGWMERMKTRAAELLATEE 142

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                       +   ++ I        F        + +
Sbjct: 143 PVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAFRRIVNLGYTEAFRARTFGPGHYS 202

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ ++   A   +            D     G++ SDH P+ +
Sbjct: 203 FWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDV-------RIDREVRSGEKPSDHVPVWV 255

Query: 301 DY 302
           + 
Sbjct: 256 EL 257


>gi|319399906|gb|EFV88152.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis FRI909]
          Length = 327

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ + N+  L      +++ N  +   +D      Y +  + D+V L E+    A  
Sbjct: 35  DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 88

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133
           ++  +      Y T  +   ++   N              + +  K   V Q+ + +   
Sbjct: 89  RLLARLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 147

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 AGN+    + +  NGK   ++  HL++    +           +   Q   +K 
Sbjct: 148 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMSEIKQ 203

Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +I  +      P  I GD N  I            ++ +              ++N   +
Sbjct: 204 FIKDKNIPKNEPVYIGGDLNV-IKDSEEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 262

Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                     +DY ++D++  +     + +  + + +       +       SDH P+S
Sbjct: 263 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 321


>gi|146307459|ref|YP_001187924.1| exonuclease III [Pseudomonas mendocina ymp]
 gi|145575660|gb|ABP85192.1| Exodeoxyribonuclease III [Pseudomonas mendocina ymp]
          Length = 270

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 84/311 (27%), Gaps = 74/311 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L         D++ LQE        + 
Sbjct: 1   MKIVSFNINGL----------------RARPHQLEALIAKHQPDVIGLQE---TKVADEQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       S  R + +         H  +A+  +   +  Q     G  +    +  R
Sbjct: 42  FPE-------SEIRQLGYHVHYHGQKGHYGVALLSRQEPLNLQK----GFPNDGEESQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  + +G  + V++       F       +        +    L+  + ++ +   
Sbjct: 91  FIYGTFADAHGNPVTVMN-----GYFPQGESRDHPVKFPAKQRFYADLQQLLVERFDPQQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++L    ++  T+     +  F     
Sbjct: 146 ALVVMGDINISPEDCDIGIGEANRLRWLKTGKCSFLPEEREWLATLKNWGLVDSFRHLNP 205

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +  +       +             ID  +  Q     L            D       +
Sbjct: 206 TVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQALQGRLKDAGI-------DYDLRGMDK 258

Query: 292 LSDHCPISIDY 302
            SDH PI ++ 
Sbjct: 259 PSDHAPIWLEL 269


>gi|154248160|ref|YP_001419118.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2]
 gi|154162245|gb|ABS69461.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2]
          Length = 262

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 82/302 (27%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                          ++      DIV +QE+         
Sbjct: 1   MRIATWNVN----------------SIRQRLDHAVRWLGETRPDIVCIQEIKCQTEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  +               D  +R    
Sbjct: 42  -------FPKEAFEQLGYNVTVHGQKGFNGVALLSRLPLEDVTHGLAGDDGDVQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V + G  + V  ++L +   +D+ +  Y           + L+ +   + +   
Sbjct: 92  --IEAVVSVKGGVVRVACLYLPNGNPVDTEKYPYKLGF------MERLEAFAADRLKLEE 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
           P ++AGDFN      +    +      +             +  L    +          
Sbjct: 144 PLILAGDFNVIPEARDAADPSAWVGDALFLPRTRSAFRSLTHLGLTDALRATSDAGRLYT 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   LI           D      ++ SDH PI  
Sbjct: 204 FWDYQAGAWQRDMGIRIDHLLLSPQAADKLIATGI-------DKHVRAWEKPSDHVPIWA 256

Query: 301 DY 302
           D 
Sbjct: 257 DL 258


>gi|114562882|ref|YP_750395.1| endonuclease/exonuclease/phosphatase [Shewanella frigidimarina
           NCIMB 400]
 gi|114334175|gb|ABI71557.1| Endonuclease/exonuclease/phosphatase [Shewanella frigidimarina
           NCIMB 400]
          Length = 955

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/331 (12%), Positives = 91/331 (27%), Gaps = 51/331 (15%)

Query: 19  SVAQKVRLVSWNI-NTLSEQEGVSLWK-----NSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++   +R+ S+N+ N  +     + +      +++         +      ++AD+  L 
Sbjct: 461 ALGADLRVASFNVLNYFNGDGNGNGFPTDRGADTLSEFERQRVKIISAMHAINADVFGLM 520

Query: 73  EMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV----- 121
           E+ +      +A+  +       +       +  S      D I   +  R   +     
Sbjct: 521 EIENDGYGSDSAINDLVSGLNQAMGAEVYAYVVPSVTQIGTDAIAVGMIYRADKITPTGD 580

Query: 122 ---RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK--KIWVLDIHLKSFCF------L 170
                   S         F    NR  +     +N +   I V   HLKS          
Sbjct: 581 AQILSSANSPVDGNGTALFDDGKNRPMLTQSFMLNDRNDSIVVAVNHLKSKGSSCDSIND 640

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
             L +         ++    +  W+  +       ++ GD N               +  
Sbjct: 641 PDLFDGQGNCNLTRTRATDAIGQWLMAQYPE-QKILVIGDLNAYAKENP-----LTQLAN 694

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR-- 288
           +          +    +         +D+ + +Q     ++  +   I  +E  I     
Sbjct: 695 HGYSELNAHFGNVNSYSYMFSGESGQLDHALANQALLDNVLAITEWHINADEPRILDYNE 754

Query: 289 ---------------GKRLSDHCPISIDYDF 304
                          G R SDH P+ +   F
Sbjct: 755 EYKSAAQILDLYHADGFRSSDHDPVIVSLQF 785


>gi|326795198|ref|YP_004313018.1| exodeoxyribonuclease III [Marinomonas mediterranea MMB-1]
 gi|326545962|gb|ADZ91182.1| exodeoxyribonuclease III [Marinomonas mediterranea MMB-1]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/314 (10%), Positives = 78/314 (24%), Gaps = 80/314 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    +    +    D++ LQE  +       
Sbjct: 1   MKVISFNINGL----------------RARPHQIAALVEKHQPDVIGLQEIKVHDDAFPK 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++  ++++  +Y                 H  +A+  K      +       +D+     
Sbjct: 45  EIPEEHSYHAYYY------------GQKSHYGVAIFSKQPATSVEYGFPTDEEDA----- 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            RR +    +     + V++       F       +        +    L  ++      
Sbjct: 88  QRRMIIATFDTENGPVKVIN-----GYFPQGESRDHETKFPAKRKFYADLMAYLASH-SK 141

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
               ++ GD N                          L    +++  +     +  +  +
Sbjct: 142 DEKIIVMGDVNISPTDLDIGIGEKNAKRWLKTGKCSFLPEEREWFDALLDWGFVDTYRSQ 201

Query: 241 KDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                        +             ID  +        L            D      
Sbjct: 202 NPESNELFSWFDYRSKGFEDTPKRGLRIDVILASNGLINQLEATGI-------DYDIRGI 254

Query: 290 KRLSDHCPISIDYD 303
           ++ SDH PI   + 
Sbjct: 255 EKPSDHAPIWASFS 268


>gi|194433512|ref|ZP_03065790.1| exodeoxyribonuclease III [Shigella dysenteriae 1012]
 gi|194418275|gb|EDX34366.1| exodeoxyribonuclease III [Shigella dysenteriae 1012]
 gi|320181218|gb|EFW56137.1| Exodeoxyribonuclease III [Shigella boydii ATCC 9905]
 gi|332085670|gb|EGI90834.1| exodeoxyribonuclease III [Shigella dysenteriae 155-74]
 gi|332090564|gb|EGI95661.1| exodeoxyribonuclease III [Shigella boydii 5216-82]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLEAELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|330446636|ref|ZP_08310288.1| exodeoxyribonuclease III [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490827|dbj|GAA04785.1| exodeoxyribonuclease III [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 91/310 (29%), Gaps = 74/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+   +    D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  Q       +D+      R
Sbjct: 42  -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDDEDA-----QR 89

Query: 144 RAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +    +  NGK + V++       F      ++        +    L +++     + 
Sbjct: 90  RMIMATFKQENGKDLTVMN-----GYFPQGDNVSHETKFPAKEKFYADLMNYLNTAHTND 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
              ++ GD N                        ++     ++ +T+     +  F +  
Sbjct: 145 EELIVMGDINISPIDLDIGIGPANAKRWLKTGKCSFQPIEREWLQTLLDWGFIDTFRQLH 204

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +  +       +           ID  +   +  +  ++        + D      ++ 
Sbjct: 205 PTVDDKFSWFDYRSKGFVDNRGLRIDVILATPSLAERCVES-------DIDYELRGIEKP 257

Query: 293 SDHCPISIDY 302
           SDH PI   +
Sbjct: 258 SDHAPIWSTF 267


>gi|150397136|ref|YP_001327603.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
 gi|150028651|gb|ABR60768.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
          Length = 368

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 107/366 (29%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDYTLLRQY------------ 60
            +RL ++NI  L  +   S ++N             R+ ++Y  L +             
Sbjct: 2   SLRLATFNIENLMSRFDFSGFRNHLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDVRQM 61

Query: 61  ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                 + DADI+ LQE  +  A+        + +  +  R     + +    I  A+ +
Sbjct: 62  SALAIADCDADILCLQEADNMAALQAFEYGYLFRMVGNGYRQKYLVEGNDTRGIDVAVMM 121

Query: 117 RK------KNVRVLQQSYPLLGAKDSF-------------SRAGNRRAVELLVEINGKKI 157
           R+      K   +  +S+  L  +D                R   R  +E+ V I G+ +
Sbjct: 122 REETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFNR 213
            +  +HLKS        +    + ++   + + ++  I  +  S       F + GD N 
Sbjct: 182 TLYVVHLKSMGPAREGLDGRQATMAVRRAEVKAVRHIIEGRFGSGDTADKIFAVCGDMND 241

Query: 214 KINY---------------LGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKNLRNKIP 256
                                        +  +  +      +    R     +   +  
Sbjct: 242 YQEKVNVLGDRRNGYEFVPYEETSSALDVLSHDGFVVNPMLRRPVLDRWTLFHSRGPEER 301

Query: 257 ----IDYFVMDQNAYKFLIQESFSEILY---------------NEDDIKSRGKRLSDHCP 297
               +DY  + Q   +         I                           + SDHCP
Sbjct: 302 HLCQLDYIWLSQELARRNAARVPEVIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 VVMTLD 367


>gi|330719976|gb|EGG98428.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC2047]
          Length = 271

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 81/312 (25%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN                   +    L+    +   D++ LQE    +     
Sbjct: 1   MKIISFNING----------------IRARIPQLQAIIDHHQPDVIGLQESKVND----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++        H  +A+  +      Q       +D+      R
Sbjct: 40  -----PDFPVEAINNMGYAVNYHGQKSHYGVAMLSRMEPKAIQKGWPDDGEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +    E +   +  +     +  F     N +        +    L +++        
Sbjct: 90  RMIIGQFECSDGGLITVL----NGYFPQGESNKHETKFPAKRKFYADLMNYLETHHTPSD 145

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GDFN                               +++  +     L  F  +  
Sbjct: 146 RVVVMGDFNISPTDNDIGIGEKNAKRWLQTGKCSFLPEEREWYDRLLAWGLLDSFRIQNP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID+ ++ Q   + L            D      ++
Sbjct: 206 EVNDRYSWFDYRSKGFDDTPKRGLRIDHILITQPLVEHLADTGI-------DYEARAMEK 258

Query: 292 LSDHCPISIDYD 303
            SDHCP+    +
Sbjct: 259 PSDHCPVWASLN 270


>gi|295096134|emb|CBK85224.1| Exodeoxyribonuclease III [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 84/309 (27%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K+  V  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKDTPVSVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       ++  Q L++++T + +   
Sbjct: 90  RIIMAEIPSALGNVTVIN-----GYFPQGESRDHETKFPAKAKFYQDLQNYLTTELKKEN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLLGWGLVDTFRTANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID  +      +  I+          D      ++ S
Sbjct: 205 ATQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAERCIETGI-------DYDIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|254251949|ref|ZP_04945267.1| Exonuclease III [Burkholderia dolosa AUO158]
 gi|124894558|gb|EAY68438.1| Exonuclease III [Burkholderia dolosa AUO158]
          Length = 281

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 80/303 (26%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +     AD++ LQE          
Sbjct: 24  MKIATWNVNSLN----------------VRKQHVLDWLAQSGADVLCLQE---------- 57

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +    +    +  +A+  +N   + +S  +             
Sbjct: 58  LKLPDEKYPRADLEAVGYRSWFTGQKTYNGVAILARNTLTVDESDVVRNIPGFDDPQQRV 117

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV +        + ++  +  +   +DS +  Y        Q    L  W+  + +   
Sbjct: 118 VAVTVE------GVRIVSAYFPNGQAVDSDKFVYK------MQWLDALHAWLAAEMQRYP 165

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GDFN        +D         + P +                +  +       
Sbjct: 166 KLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLIELGFVDAFRRFEQPEKTFT 225

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D      ++ SDH P+  
Sbjct: 226 WWDYRMFAFRRNAGLRIDHILLSPALADTCTSC-------VVDRAPRTWEQPSDHTPVVA 278

Query: 301 DYD 303
              
Sbjct: 279 TVS 281


>gi|85703273|ref|ZP_01034377.1| exodeoxyribonuclease III [Roseovarius sp. 217]
 gi|85672201|gb|EAQ27058.1| exodeoxyribonuclease III [Roseovarius sp. 217]
          Length = 260

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 83/303 (27%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  +      D+V LQE+ S   V   
Sbjct: 1   MKIATFNING----------------IKARIDALPAWLDEAAPDVVLLQEIKS---VDDG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +         + ++           +A+  K               D  +R    
Sbjct: 42  FPREIF-------EDLGYNVETHGQKGFNGVAILSKRPLEDVTRGLPGDDTDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V  + + + +  ++L +       +  Y  +        + L+        S  
Sbjct: 92  --IEATVMGDHRALRLCGLYLPNGNPTPGPKYDYKLA------WMERLQARARDLLASEE 143

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD+N                       +   ++ I        F        +  
Sbjct: 144 PVLMGGDYNIIPQDEDAARPEAWREDALALPESRAAFRRILNLGFTEAFRARVQGPGHYT 203

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+F++   A   L            D       + SDH P+ +
Sbjct: 204 FWDYQAGAWNKNDGIRIDHFLLSPQAADLLTDCGI-------DKEIRARDKPSDHVPLWV 256

Query: 301 DYD 303
           + D
Sbjct: 257 EID 259


>gi|294054975|ref|YP_003548633.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614308|gb|ADE54463.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 299

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 115/312 (36%), Gaps = 24/312 (7%)

Query: 2   IRKYVLALVFFL--VPCTASVAQKVRLVSWNINTLSEQEG--VSLWKNSVKRTTSDYTLL 57
           +R   +A  F L  V C A+ AQ +R+ S N++     +      W+    +  S+   L
Sbjct: 1   MRSSWIAACFLLGVVSCFAAQAQ-LRVASLNLDNYLIMDRSVDGRWRKEYPKPESEKHAL 59

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           RQ   ++  D++ +QE+G    + ++           +  +     R S+   H A+   
Sbjct: 60  RQAILSVRPDVLVVQEIGGAEFLEELRLDLANLGLEYSSAIH---MRGSDTVRHVAVLSM 116

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176
            +  + + +   L  A     +A +R  +EL  E   G+   +  +HLKS    +     
Sbjct: 117 VE-PQSIVRHADLNFAYMERRQAVSRGLLELSFEGRGGQNFRLFAVHLKSRRTTE---KA 172

Query: 177 YSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
              S    +++A+  ++ I      +  +P+++ GDFN           F++  +     
Sbjct: 173 DPQSVLWRTREAEACRNRIIERHDGDGNLPYLVVGDFNDHPRSSTLRR-FYQRGERELGH 231

Query: 235 IRFPKEKDSRCNANKN--LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                +   +   +      +   +D FV        +     + +         R    
Sbjct: 232 WVPAADSRGQVWTHFYAREYSYSTVDGFVASPELLPSIKNGRATIV------DDPRTLSA 285

Query: 293 SDHCPISIDYDF 304
           SDH  + +D DF
Sbjct: 286 SDHRMVYLDLDF 297


>gi|220933200|ref|YP_002512099.1| exodeoxyribonuclease III [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994510|gb|ACL71112.1| exodeoxyribonuclease III [Thioalkalivibrio sp. HL-EbGR7]
          Length = 255

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 74/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  +      D++ LQE    +     
Sbjct: 1   MKIATWNVNSL----------------KVRLPQVLDWLAAQQPDVLALQETKLTDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +    S    +  +A+  ++  +                   R
Sbjct: 42  -------FPVEAIREAGYHCVYSGQKTYNGVAILARHELL------DPLTDIDGLDDPQR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V+     + V+++++ +   + S +  Y             +  +I  + +   
Sbjct: 89  RILAATVD----GVRVINLYVVNGSEVGSEKYAYKLD------WLGKVTGFIAGEMKRHE 138

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN        +D                  K I        F +  +    + 
Sbjct: 139 KLVVLGDFNIAPEDRDVHDPEAWHEKILCSTPEREALKKILDLGLSDCFRRF-EQPEQSF 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID  +      +                   R +R SDH P+ 
Sbjct: 198 SWWDYRAAGFRRNLGLRIDLILSSPALTETCTACIIDVE-------PRRLERPSDHAPVV 250

Query: 300 IDY 302
            ++
Sbjct: 251 AEF 253


>gi|126725257|ref|ZP_01741099.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2150]
 gi|126704461|gb|EBA03552.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2150]
          Length = 259

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 84/303 (27%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NIN                   +    L ++      D+V LQE+ S       
Sbjct: 1   MKIASFNING----------------IKARINALPEWLAEAKPDVVLLQEIKS------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +N     +       ++           +A+  +               D  +R    
Sbjct: 38  VDENFPRELFEDM---GYTVETHGQKSFNGVAILSRLPLEDITRGLPGDDTDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V +    + V  ++L +   +   +  Y  +          L+    +  E   
Sbjct: 92  --IEATV-MGKTPVRVCGLYLPNGNPVPGPKYDYKLA------WMDRLQARAVELLEIEE 142

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PFV+AGD+N                       +   ++ +        F        + +
Sbjct: 143 PFVVAGDYNIIPQDEDAKHPEVWVEDALARPESRAAYRRLLNLGFTEVFRTRNPGPGHYS 202

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          ID+F+        +            D      ++ SDH P+ I
Sbjct: 203 FWDYQRGAWDKNDGIRIDHFLASPECADLVTDCQI-------DSYVRGREKPSDHVPVWI 255

Query: 301 DYD 303
           + D
Sbjct: 256 ELD 258


>gi|91225244|ref|ZP_01260412.1| exodeoxyribonuclease III [Vibrio alginolyticus 12G01]
 gi|91189883|gb|EAS76155.1| exodeoxyribonuclease III [Vibrio alginolyticus 12G01]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 85/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPIEAVEAMGYKVYFHGQKAHYGVAMLCKQEPLHVQK----GFPTDNEEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +  NG+K+ VL+       F      ++        Q  + L  ++     +  
Sbjct: 91  MIMATFLNENGEKVTVLN-----GYFPQGDNISHETKFPYKRQFYKDLMTYLNDHHNNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ KT+     +  F K   
Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFVDTFRKLYP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +   +  +  I+          D      ++ S
Sbjct: 206 EVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAEKCIESGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|303258098|ref|ZP_07344106.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47]
 gi|330998688|ref|ZP_08322417.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT
           11859]
 gi|302859117|gb|EFL82200.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47]
 gi|329576427|gb|EGG57939.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT
           11859]
          Length = 265

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 94/305 (30%), Gaps = 66/305 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + +WN+N+L                      +  + K  +  I+ LQE+    A   
Sbjct: 2   SITITTWNVNSL----------------KVRQPQVLDFLKETENSILCLQELKMQEA--- 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   I  S  + I ++        +  +A   ++         +      F    +
Sbjct: 43  -------DIDASAFKEIGYTLDAFGQKTYNGVATILRDPLTFLPDEEVRNIP-GFEDPQS 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +   V +  +++ V++ +  +   ++S +  Y  S        + L +W+  + E  
Sbjct: 95  R-LLAATVRVGCERLRVINGYFPNGETVESEKFPYKLS------WLEALAEWLPSQLEQY 147

Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247
              V+ GDFN         D                 ++ +     L    +  +    +
Sbjct: 148 PNLVLLGDFNIAPEDRDVWDPESWAESVLCTPKAREAFQRLIDLG-LTDSFRAFEQPEKS 206

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++ +      +     + +          +R SDH P+
Sbjct: 207 YSWWDYRMMAFRRNRGLRIDHILISKALVSKNLGVEIHKKV-------RGNERPSDHAPV 259

Query: 299 SIDYD 303
           ++  D
Sbjct: 260 TLTLD 264


>gi|332879788|ref|ZP_08447478.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332682307|gb|EGJ55214.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 352

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/348 (9%), Positives = 87/348 (25%), Gaps = 57/348 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSE--QEGVSLWKNSVKRTTSDY- 54
           M R  +L      +    +  +K     +  +N+  L +   +      +        + 
Sbjct: 5   MRRNLILVWCLLALAYVNAQPKKFMVRTVAFYNVENLFDTINDPHKFDDDRTPNGADRWT 64

Query: 55  --------TLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
                     + +              DI+ + E+ +   +  +        +       
Sbjct: 65  SKVYNDHVQKIAKVLSEIGTDVTHHAPDIIGVAEIENDVVLTDLINTPYLKKY-----NY 119

Query: 100 NHSKRDSNNDIHTAIAVRKK---NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                +S +     +A+  K         +++PL   K+       R  + +  +++G++
Sbjct: 120 GIVHYESPDARGVDVALLYKQGVFKPSSSKAHPLYLTKEDGKPLYTRDQLLVSGDLDGEE 179

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           +  +  H  S    ++         + L++Q   +   +          +  GDFN    
Sbjct: 180 VHFIVNHWPSRLGGEAKSRPMREKAAALNKQI--IDSLLK--INPNAKIMSMGDFNDDPI 235

Query: 217 YLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
             G  +          + P +                         D      +  K   
Sbjct: 236 NSGFKNILKTKDKKEDVKPGELFNPMEAMLKKGMGTLAYQDGWNLFDQIYFTYDLLKEDK 295

Query: 272 QE-------------------SFSEILYNEDDIKSRGKRLSDHCPISI 300
                                 +    +      +     SDH P+ I
Sbjct: 296 SSYRYWKAGIFNRPYLANPKGRYKGYPFRSMANGNYTWGYSDHFPVYI 343


>gi|160891511|ref|ZP_02072514.1| hypothetical protein BACUNI_03962 [Bacteroides uniformis ATCC 8492]
 gi|156858918|gb|EDO52349.1| hypothetical protein BACUNI_03962 [Bacteroides uniformis ATCC 8492]
          Length = 283

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 83/310 (26%), Gaps = 43/310 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           I   ++     +  C      KV ++S+NI        +    +S+           Q  
Sbjct: 6   INSVLVVFALLVASCGRQPEAKVEVMSFNIR-------LDHVADSMNNWKYRKDHAAQMI 58

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI+ +QE+              +                 +    T      K+ 
Sbjct: 59  AYYAPDIIGMQEVVKNQLDDLKERLPQYTALGVGRADGEEKGEYCSLFYKTDRFELLKSG 118

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                  P    K  +  A  R     ++  +++G++I   + H     F    +     
Sbjct: 119 NFGLSETPDSIGKKGWDAACERIVTWAVLKDKVSGREIAAFNTH-----FDHVGKVARRE 173

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLIRF 237
           S  L+ ++ + +           +P ++  DFN  ++           +      +    
Sbjct: 174 SAVLILEKIKQMA--------GDLPVIVTRDFNGTVDSEPV-----TVLTEGGMKNACVT 220

Query: 238 PKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            K       +  +        +  ID+  +                 Y   D K     L
Sbjct: 221 AKVAYGPTWSFHDFGRIPVEKRRLIDFIFIKGA---------VEVERYRTIDDKPDNGYL 271

Query: 293 SDHCPISIDY 302
           SDH P+    
Sbjct: 272 SDHAPVMAIL 281


>gi|124009803|ref|ZP_01694472.1| endonuclease/exonuclease/phosphatase [Microscilla marina ATCC
           23134]
 gi|123984211|gb|EAY24567.1| endonuclease/exonuclease/phosphatase [Microscilla marina ATCC
           23134]
          Length = 356

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 98/335 (29%), Gaps = 67/335 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWK-----NSVKRTTSD-----YTLLRQYAKNL 64
             T    Q ++++SWN+  ++ +  V  +          R + D        + +     
Sbjct: 36  APTLKAGQSLKVLSWNVQYMAGKGYVFFYDLLDNSGPDTRPSKDSISLTIKEVARIITQE 95

Query: 65  DADIVFLQEM-------GSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAI- 114
           D DI+ LQE+          + + ++       +    S          D +      + 
Sbjct: 96  DPDIILLQEIDEGAARTDKEDQLKRLLGLINKAYQCHCSAFYWKASFVPDPHVMGSVGMK 155

Query: 115 ---AVRKKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEING-KKIWVLDIHLKSFCF 169
                + K    ++   PL+       +    R  +E  + + G K + VL+ HL +F  
Sbjct: 156 LSTISKYKISEGIRHQLPLIPQNFLVQQFYLKRAVLETKMPVEGNKDLLVLNTHLSAFAQ 215

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------ 223
             +           + QQ   +   + ++ +   P+++ GDFN                 
Sbjct: 216 GTN----------TMEQQVVHVNKMLKERTKQGHPWLLGGDFNLLPVGNAYRTLPKYQKK 265

Query: 224 -------FWKTIDPNDSLIRFPKEKDSRCNANKNL--------RNKIPIDYFVMDQNAYK 268
                       +   ++    + +                  +    IDY    +N   
Sbjct: 266 YYKPKTEIASFFNDYQAVPNIEQTRGENRAEWFTHFPNDPRVKQPDRTIDYIFFSKNI-- 323

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     L      +     +SDH P+  ++ 
Sbjct: 324 ---------DLGKTGIGQKDTWSISDHLPLMAEFS 349


>gi|114321929|ref|YP_743612.1| exodeoxyribonuclease III [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228323|gb|ABI58122.1| Exodeoxyribonuclease III [Alkalilimnicola ehrlichii MLHE-1]
          Length = 258

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 92/306 (30%), Gaps = 76/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++L SWN+N+L                      +  + ++   D+V LQE  +      A
Sbjct: 1   MKLASWNVNSL----------------KVRLPQVLDWLESRQPDLVGLQETKLTDERFPA 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +  + + Y+ +   N            A+  R +    + +  P L          
Sbjct: 45  EALNEAGYQVAYAGQPTYN----------GVAVLARGRAPEAVIRDIPGLDDP------- 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            RR + + V      +  +++++ +   + S +  Y             L DW+ +++  
Sbjct: 88  QRRVLGVTV----GDLRFINLYVPNGSEVGSEKYAYKLD------WLARLADWLAEERRR 137

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               V+ GDFN   +    +D                  + +     L    +  D    
Sbjct: 138 HDKLVVVGDFNIAPDDRDVHDPELWREKVLCSTPEREALRRLTGELGLTDTFRLFDQPEK 197

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  ++          ID  +     Y+              D      +R SDH P
Sbjct: 198 VWSWWDYRMNNFKRNRGLRIDLVLASPALYQACTSSYV-------DREPRTWERPSDHAP 250

Query: 298 ISIDYD 303
              +++
Sbjct: 251 AVAEFN 256


>gi|315126445|ref|YP_004068448.1| exonuclease III [Pseudoalteromonas sp. SM9913]
 gi|315014959|gb|ADT68297.1| exonuclease III [Pseudoalteromonas sp. SM9913]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 81/310 (26%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        DI+ LQE+       + 
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHQPDIIGLQEI---KVHDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +         + + +         H  +A+  K          L G       +  R
Sbjct: 42  FPLD-------DVQKMGYHVYFHGQKAHYGVAMLCKKEPKSV----LKGFSTDTDESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                + + NG+ + V++       F       +        Q  Q L   +        
Sbjct: 91  MISVTVEQENGRDLHVMN-----GYFPQGDNINHETKFPYKRQFYQDLMTHLNSHYTPDQ 145

Query: 204 PFVIAGDFNRKINYLGN---------------------NDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N     L                         ++  T+        F ++  
Sbjct: 146 DVIVMGDINISPTDLDIGIGEVNAKRWLKTGKCSFQPVEREWLATLLNWGFKDTFREQNP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +   +     I           D       + S
Sbjct: 206 ETNDQYSWFDYRSKGFVDNRGLRIDVVLATHDLAARCIDTGI-------DYELRAIDKPS 258

Query: 294 DHCPISIDYD 303
           DH PI  +++
Sbjct: 259 DHAPIWSEFN 268


>gi|238910880|ref|ZP_04654717.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE        ++
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F +   
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +   +          D      ++ S
Sbjct: 205 QTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|218695307|ref|YP_002402974.1| exonuclease III [Escherichia coli 55989]
 gi|331668438|ref|ZP_08369286.1| exodeoxyribonuclease III [Escherichia coli TA271]
 gi|218352039|emb|CAU97776.1| exonuclease III [Escherichia coli 55989]
 gi|323948123|gb|EGB44113.1| exodeoxyribonuclease III [Escherichia coli H120]
 gi|324119235|gb|EGC13123.1| exodeoxyribonuclease III [Escherichia coli E1167]
 gi|331063632|gb|EGI35543.1| exodeoxyribonuclease III [Escherichia coli TA271]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|307591319|ref|YP_003900118.1| endonuclease I [Cyanothece sp. PCC 7822]
 gi|306986173|gb|ADN18052.1| Endonuclease I [Cyanothece sp. PCC 7822]
          Length = 573

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/330 (13%), Positives = 96/330 (29%), Gaps = 52/330 (15%)

Query: 5   YVLALVFFLVPCTASVAQ--KVRLVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYT 55
           Y LA         A V    ++ + ++N+  L  Q       +               ++
Sbjct: 14  YSLAQFALAPAVLAQVKDFNQLSVATFNVENLDPQKEALAKVKDKDPDNVDDDVAKGKFS 73

Query: 56  LLRQYAKN--LDADIVFLQEMGSYNAVA------------------KVFPKNTWCIFYST 95
            L +   N     DI+ LQE+   +                     K     ++ ++   
Sbjct: 74  ALAKEIVNDLQAPDIIALQEIQDNDGAELSSVVDASVTANTLIDAIKSAGGPSY-LYRDI 132

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
               +        +I  A       V++      L     + + + +RR +      N  
Sbjct: 133 PPEKDQEGGQPGGNIRVAFLFNPARVKLQ----KLERFSSNVAFSDSRRPLVGEFTFNNN 188

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNR 213
            I +++ HLKS             S     +QA+ +  +++   +       ++ GDFN 
Sbjct: 189 AITIINNHLKSKSGGAV------ASLGQRVEQAKLVNQFVSDLLETNPTASIIVLGDFND 242

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
             +           ++         K   +   +     N+  ID  ++ +N        
Sbjct: 243 TPDSPAVQTLLGTVLE-----NLTEKIPLAERYSFIFKGNRELIDQILVSENL-----AS 292

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +        +  R SDH P+   + 
Sbjct: 293 GGQPEIKAVHVNAGKPGRASDHDPVIASFT 322


>gi|113477060|ref|YP_723121.1| exodeoxyribonuclease III [Trichodesmium erythraeum IMS101]
 gi|110168108|gb|ABG52648.1| Exodeoxyribonuclease III [Trichodesmium erythraeum IMS101]
          Length = 261

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 90/305 (29%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                   +    + ++ K    DI+ LQE  +   +   
Sbjct: 1   MKIATWNVN----------------SIRTRKQQVIEWLKANSVDILCLQETKVIDQDFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F +  + I+ S ++  N            AI  R     +     P+LG         
Sbjct: 45  SPFAELGYHIYVSGQKSYN----------GVAIFSRSPMEDISSGFAPILGDHKVGDFDI 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +R +  ++      + +L++++ +   + S +  Y           + L++++    + 
Sbjct: 95  QKRLITGVIN----DVRILNLYVPNGSSVGSEKYDYKLD------WLKLLQEYVKIILDK 144

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
                I GDFN         D                  + I     +  F +      +
Sbjct: 145 SPNLCICGDFNIVPEDRDIYDPEGCKNSVGLSDLERQALQEILKLGLVDAFRQFTTEGGH 204

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  +     +              D       + SDH P
Sbjct: 205 -YSWWDYRAAGFRRNRGWRIDHHYLSLPLSQKATMCVI-------DKNPRELLKPSDHAP 256

Query: 298 ISIDY 302
           + +++
Sbjct: 257 VIVEF 261


>gi|254468067|ref|ZP_05081473.1| exodeoxyribonuclease III [beta proteobacterium KB13]
 gi|207086877|gb|EDZ64160.1| exodeoxyribonuclease III [beta proteobacterium KB13]
          Length = 256

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 90/304 (29%), Gaps = 71/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N+L                   +  L       + D++ LQE  S +     
Sbjct: 1   MKIISWNVNSL----------------KIRHNQLVDIINKHNPDVISLQETKSQDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      +   + +    +       +A+  K        +  +       +   +
Sbjct: 41  ------NFPIESFNNLGYQSIFTGQKTFNGVAIITKLP------FENILLNIPNFQDEQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R V   V+ + +KI +++ +  +   LDS +  Y  S          L  +I        
Sbjct: 89  RFVSAEVKFDDRKIIIMNGYFPNGQSLDSDKFIYKQS------WVNALLKFIKT---KNS 139

Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPN-----------DSLIRFPKEKDSRCNANK 249
             ++ GDFN   +              +  +            +     +  +       
Sbjct: 140 DSLLMGDFNIAPDDIDCHDPEKWVGTVLTSDIERNLFKEIIECNFTDTHRYLNKNEPGFT 199

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ +   +   FL         ++      + +R SDH PI +
Sbjct: 200 WWDYRMAAFRRNLGLRIDHILASHDLINFLKD-------FSVLSDYRKLERPSDHAPIML 252

Query: 301 DYDF 304
             +F
Sbjct: 253 TLNF 256


>gi|323135771|ref|ZP_08070854.1| exodeoxyribonuclease III [Methylocystis sp. ATCC 49242]
 gi|322398862|gb|EFY01381.1| exodeoxyribonuclease III [Methylocystis sp. ATCC 49242]
          Length = 269

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 80/310 (25%), Gaps = 66/310 (21%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
               +Q++R+ +WN+N                      + L  + K    DI+ LQE+  
Sbjct: 2   APRGSQELRVATWNVN----------------SVRQRLSPLLAFLKETAPDILCLQELKC 45

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +               S      ++           +A+              +G    
Sbjct: 46  ED----------HAFPRSEIEDAGYNVVVHGQKTFNGVAILSNRPIEETT----IGLPGF 91

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              A +R    ++ +  G  + V  I+  +    D+ + TY  +        + L     
Sbjct: 92  DGEAQSRYVEAVISDGAGGVLRVASIYAPNGNPPDTPKYTYKLAF------MEALTRHAA 145

Query: 197 QKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKD 242
                    ++AGD+N        +D        +             N       +   
Sbjct: 146 DLLRLEEVTILAGDYNVIPEARDVHDPAAWIGDALFMPQSRAALQRVINLGYTDALRAVT 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID+ ++   A   L                  G++ S
Sbjct: 206 DEPGLYTFWDYQAGAWQKNRGLRIDHLLLSPRAADRLAGVEIH-------KSMRAGEKPS 258

Query: 294 DHCPISIDYD 303
           DH  IS +  
Sbjct: 259 DHVAISAELT 268


>gi|218699684|ref|YP_002407313.1| exonuclease III [Escherichia coli IAI39]
 gi|218369670|emb|CAR17439.1| exonuclease III [Escherichia coli IAI39]
          Length = 268

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIIAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|291615383|ref|YP_003525540.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1]
 gi|291585495|gb|ADE13153.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1]
          Length = 252

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 86/302 (28%), Gaps = 76/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L                      L ++      D+V LQE  S +     
Sbjct: 1   MKLATWNVNSL----------------KVRLPHLLEWLAANPVDVVCLQETKSED----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  +   +    S    +  +A+  +      Q                +
Sbjct: 40  -----KNFPLAELQQAGYQVAFSGQKTYNGVAILSRQPIGDVQC------GIPGFEDEQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   ++     + V+ +++ +   + S +  Y        +    +  W+ ++     
Sbjct: 89  RVIAATID----GVRVVCVYVPNGQEVGSDKYQYK------LKWLAAITAWLKEELAKHP 138

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              + GD+N        +D                 +K +        F   + +   + 
Sbjct: 139 RLALLGDYNIAPEDRDVHDPVAWQGNVLVSAPERDAFKALLQLGLRDAFRLFEQAE-KSY 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++           S   I    D    + +R SDH P+ 
Sbjct: 198 SWWDYRMMAFRRNMGLRIDHILISPALQ-----CSACHI----DKAPRKLERPSDHTPVV 248

Query: 300 ID 301
            +
Sbjct: 249 AE 250


>gi|293415066|ref|ZP_06657709.1| exodeoxyribonuclease III [Escherichia coli B185]
 gi|291432714|gb|EFF05693.1| exodeoxyribonuclease III [Escherichia coli B185]
          Length = 268

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTAERFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|153009683|ref|YP_001370898.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188]
 gi|151561571|gb|ABS15069.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188]
          Length = 260

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 82/303 (27%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L+ + K    DI  LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARIENLQHWLKESSPDIACLQEIKSVDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEVNRGLPGDDGDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V+ ++L +   +D+ +  Y  S        Q L+ W   +     
Sbjct: 92  --IEGVYSTDKGVVRVVSLYLPNGNPVDTEKFPYKLS------WMQRLELWAKDRLALEE 143

Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249
           P V+AGD+N                  +             N       +          
Sbjct: 144 PLVLAGDYNVIPEPDDAKNPEQWVGDALFKPQSRQAFRRLENLGFTDAIRASTDDSGIYS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A    I     + +          ++ SDH P++I
Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEAANRFISSDVEKHV-------RAWEKPSDHVPVTI 256

Query: 301 DYD 303
              
Sbjct: 257 TLS 259


>gi|78066588|ref|YP_369357.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
 gi|77967333|gb|ABB08713.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
          Length = 284

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 79/307 (25%), Gaps = 52/307 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+ WNI    + +G             D        + L D D++ LQE+        
Sbjct: 1   MRLIDWNIQWGRDADGA-----------VDLPRTVAAIRALGDFDVLCLQEVTRGFGALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                +  A++                               A+  +          L  
Sbjct: 50  GRPGADQFAELAALLPGYAIVEAIGADLPPIETGAPRRQFGNAIATRLPVGRVLRQLLPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D+ + +  R A+++ ++     + V+  HL+ +            +     ++A    
Sbjct: 110 PADAGAPSMPRIALDVELQAPFGPLRVVTTHLEYYSARQ--RLAQVDALRDRHREACAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                 + +  PF         ++ GDFN                D    +  +      
Sbjct: 168 ARPAPAETAEGPFSATGQPCDAIVCGDFNSAFGSEAYRRFMEPIADAPRFVDAWVARHPG 227

Query: 244 RCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           R                  +  D+  +       + +                  R SDH
Sbjct: 228 RTPPPTAGVYDTVQWSEGPLACDFVFVTDTLLPRVTRCEI-----------DGDVRASDH 276

Query: 296 CPISIDY 302
            P+ ++ 
Sbjct: 277 QPVLLEL 283


>gi|269967644|ref|ZP_06181694.1| exodeoxyribonuclease III [Vibrio alginolyticus 40B]
 gi|269827731|gb|EEZ82015.1| exodeoxyribonuclease III [Vibrio alginolyticus 40B]
          Length = 268

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 84/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPIEAVEAMGYKVYFHGQKAHYGVAMLCKQEPLHVQK----GFPTDNEEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +  NG+K+ VL+       F      ++        Q  + L  ++     +  
Sbjct: 91  MIMATFLNENGEKVTVLN-----GYFPQGDNISHETKFPYKRQFYKDLMTYLNDHHNNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ K +     +  F K   
Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKALLDWGFVDTFRKLYP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +   +  +  I+          D      ++ S
Sbjct: 206 EVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAEKCIESGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|222106133|ref|YP_002546924.1| hypothetical protein Avi_5005 [Agrobacterium vitis S4]
 gi|221737312|gb|ACM38208.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 245

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 84/280 (30%), Gaps = 44/280 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            RL+++NI++    +              D   + +     +ADIV LQE+         
Sbjct: 5   FRLLTYNIHSCIGTDR-----------RLDPARIAEVIVATEADIVCLQEVDVGRNRTSG 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      Y T +   HS  +   +     A+  +    + Q   L        R   R
Sbjct: 54  IDQADVIAGYLTMQSHFHSALNVA-EERYGDALLTRFPTRIVQQGMLPS------RGEQR 106

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKES 201
            A+ + V I    + V   H                     ++QA+ L   +W+    E+
Sbjct: 107 GALLVEVSIGQIAVNVCVTHFGLRAG-------------ERAEQARALLGVEWLGPLLEA 153

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P V+A D N  ++           +                     +    + +D+ +
Sbjct: 154 DAPIVVAADLNA-VSNSKAFKLLTARLADATKANLKSDSLSRSKPTFPSRFPFLRLDHVL 212

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +             + +     D     +R SDH P+ + 
Sbjct: 213 ISGGL---------NILEARVIDTP-LARRASDHLPLLVT 242


>gi|242243247|ref|ZP_04797692.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis W23144]
 gi|242233196|gb|EES35508.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis W23144]
          Length = 334

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 99/299 (33%), Gaps = 33/299 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ + N+  L      +++ N  +   +D      Y +  + D+V L E+    A  
Sbjct: 42  DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 95

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133
           ++  +      Y T  +   ++   N              + +  K   V Q+ + +   
Sbjct: 96  RLLARLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 154

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 AGN+    + +  NGK   ++  HL++    +           +   Q   +K 
Sbjct: 155 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDSTCFKGKDKDIRQSQMSEIKQ 210

Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +I  +      P  I GD N  I      +     ++ +              ++N   +
Sbjct: 211 FIKDKNIPKNEPVYIGGDLNV-IKDSDEYEQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 269

Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                     +DY ++D++  +     + +  + + +       +       SDH P+S
Sbjct: 270 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 328


>gi|134096002|ref|YP_001101077.1| DNase [Herminiimonas arsenicoxydans]
 gi|133739905|emb|CAL62956.1| Putative endonuclease/exonuclease/phosphatase family protein
           [Herminiimonas arsenicoxydans]
          Length = 264

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 84/299 (28%), Gaps = 58/299 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+ ++NI+      G                 L+Q    + +D++FLQE+   + +  
Sbjct: 2   KLRITTYNIHKGVSSFGA----------RPRIHALKQAINAMQSDVLFLQEVQGRHDLHA 51

Query: 83  VFPKNTW------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +     W                 +      +  H   A+      +  +         S
Sbjct: 52  LKHATDWPELSQQDFLAGDSHQCAYGMNAVYDHGHHGNALLSCFPILSSR-----NQNIS 106

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             +  +R  +  +V     ++    IHL  F                  +Q   L + ++
Sbjct: 107 DHKYESRGILHCVVRAPEAEVHCFVIHLGLFAGS-------------RKRQTAALIEAVS 153

Query: 197 QKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              ES  P +IAGDFN   N L           + F   +          +         
Sbjct: 154 ASAESGAPIIIAGDFNDWGNRLSEELRDTLGVTEVFDANLSRRGFGTYLRQLSGRGTKIQ 213

Query: 249 KNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                        +D   +          ES   +        +   +LSDH PI  + 
Sbjct: 214 PARTFPAAMPFLQLDRIYVRG-----FKVESAEVLH------GAMWGKLSDHAPIVANL 261


>gi|116329336|ref|YP_799056.1| sphingomyelinase C precursor [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330061|ref|YP_799779.1| sphingomyelinase C precursor [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|130088|sp|P17627|PHL_LEPIN RecName: Full=Sphingomyelinase C; AltName: Full=Sphingomyelin
           phosphodiesterase; Short=SMase; Flags: Precursor
 gi|44013|emb|CAA36424.1| unnamed protein product [Leptospira interrogans]
 gi|116122080|gb|ABJ80123.1| Sphingomyelinase C precursor [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123750|gb|ABJ75021.1| Sphingomyelinase C precursor [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 556

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 99/303 (32%), Gaps = 25/303 (8%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++  +      +++++ N+  L +   +  W N  +   +   +   Y +  + D++   
Sbjct: 75  ILANSIPENMGIKILTHNVFLLPKT--LPGWGNWGQNERAQRIVSSNYIQ--NQDVIVFD 130

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVL 124
           E    +A   +         Y T+ +    K                  + +  K     
Sbjct: 131 EAFDTDARKILLDGVRSEYPYQTDVIGRTKKGWDATLGLYRTDAFTNGGVVIVSKWPIEE 190

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +  +             N+    + ++ NG+K  ++  H+++     +     +      
Sbjct: 191 KIQHVFKEKGCGADVFSNKGFAYVRIDKNGRKFHIIGTHVQAQDSGCA-----NLGVVSR 245

Query: 185 SQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEK 241
             Q   ++D+I  +K       +IAGD N        +         +P    + F  + 
Sbjct: 246 VNQFNEIRDFIDSKKIPKNEMVLIAGDLNVIKGSREYHQMLCILNVNNPKYVGVPFTWDT 305

Query: 242 DSRCNANKNLRN--KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHC 296
            +   A    +      +DY  + ++ ++  I ++ +    +     ++G      SDH 
Sbjct: 306 KTNEIAAFYYKKVEPAYLDYIFVSKSHFQPPIWQNLAYDPISAKTWTAKGYTSDEFSDHY 365

Query: 297 PIS 299
           P+ 
Sbjct: 366 PVY 368


>gi|206560253|ref|YP_002231017.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
 gi|198036294|emb|CAR52190.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
          Length = 284

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 48/305 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+ WNI    + +GV            D        + L D D++ LQE+        
Sbjct: 1   MRLIDWNIQWGRDADGV-----------VDLPRTVAAIRELGDFDVLCLQEVTRGFDALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                +   ++                  + R          A+  +          L  
Sbjct: 50  GRPGPDQFGELAALLPGYTVVDAIGADLPAIRPGAPRRQFGNAIATRLPVGRVLRQSLPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSCSLLSQ 186
             D+ + +  R A+++ ++     + V+  HL+ +        +D+L + +  +C+  + 
Sbjct: 110 PADAGAPSMPRVALDIELQAPFGPLRVVTTHLEYYSARQRLAQVDALRDRHREACAHATH 169

Query: 187 QAQW-LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            A+    +            ++ GDFN                D  D +  +      R 
Sbjct: 170 PARAETAEGPFSATGQPRDAIVCGDFNSAFGSDAYRRFLAPLADAPDFIDAWVARHPGRT 229

Query: 246 NANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            +  D+  +       + +                  R SDH P
Sbjct: 230 PPPTAGVYDTVQWSDGPLACDFVFVTDTLLPRVTRCEI-----------DGNVRASDHQP 278

Query: 298 ISIDY 302
           + +D 
Sbjct: 279 VLLDL 283


>gi|325145191|gb|EGC67473.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240013]
          Length = 256

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVN-----IGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMARHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +                    
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWFQNLLDLGLTDSLRHIHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RVDLDTRALERPSDHAPVT 251

Query: 300 IDYDF 304
            ++D+
Sbjct: 252 AEFDW 256


>gi|323968517|gb|EGB63923.1| exodeoxyribonuclease III [Escherichia coli M863]
 gi|327252867|gb|EGE64521.1| exodeoxyribonuclease III [Escherichia coli STEC_7v]
          Length = 268

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 79/310 (25%), Gaps = 75/310 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N                               +   + I     +  F    
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLIS-WGLVDTFRHAN 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  Q      ++          D      ++ 
Sbjct: 204 PETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLADCCVETGI-------DYEIRSMEKP 256

Query: 293 SDHCPISIDY 302
           SDH P+   +
Sbjct: 257 SDHAPVWATF 266


>gi|253565260|ref|ZP_04842715.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945539|gb|EES85946.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 361

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 88/304 (28%), Gaps = 68/304 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ ++N+++   ++                  L  Y K    DI+  QE     A 
Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSC-----------KELAAYMKEHRVDIICFQEF----AG 144

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F  ++    ++  +      +  ++     +A+  K      +      +++     
Sbjct: 145 NRYFTPDSIRNAFADWQYAVIP-QAPDSTPILQVALFSKYPVKDSRLITYPDSRNCS--- 200

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179
                +   + ++G+ I V + HL++     +                            
Sbjct: 201 -----MWCDLNVDGQTIRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGL 255

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +    + QA+ L+  I     +  P ++ GDFN   +    +      +        F
Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPVLVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                      +  +  + IDY    +                  D         SDH P
Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLDLCSDHNP 354

Query: 298 ISID 301
           + ++
Sbjct: 355 VVME 358


>gi|27466926|ref|NP_763563.1| truncated beta-hemplysin [Staphylococcus epidermidis ATCC 12228]
 gi|57865922|ref|YP_190085.1| beta-hemolysin [Staphylococcus epidermidis RP62A]
 gi|27314468|gb|AAO03605.1|AE016744_8 truncated beta-hemplysin [Staphylococcus epidermidis ATCC 12228]
 gi|57636580|gb|AAW53368.1| beta-hemolysin [Staphylococcus epidermidis RP62A]
          Length = 334

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ + N+  L      +++ N  +   +D      Y +  + D+V L E+    A  
Sbjct: 42  DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 95

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133
           ++  +      Y T  +   ++   N              + +  K   V Q+ + +   
Sbjct: 96  RLLTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 154

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 AGN+    + +  NGK   ++  HL++    +           +   Q   +K 
Sbjct: 155 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMSEIKQ 210

Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +I  +      P  I GD N  I            ++ +              ++N   +
Sbjct: 211 FIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 269

Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                     +DY ++D++  +     + +  + + +       +       SDH P+S
Sbjct: 270 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 328


>gi|323497461|ref|ZP_08102479.1| hypothetical protein VISI1226_00690 [Vibrio sinaloensis DSM 21326]
 gi|323317544|gb|EGA70537.1| hypothetical protein VISI1226_00690 [Vibrio sinaloensis DSM 21326]
          Length = 316

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 102/311 (32%), Gaps = 29/311 (9%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             +   + N+    E         +    +          +   +LDADI+ LQE+ S  
Sbjct: 5   NTLTFATANLFNFVEPPSAFYDFENIYDAQGWADKCRWTAEKITSLDADIIGLQEVFSIE 64

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--LLGAKDS 136
           A  K+F +  +  ++ T    +            A+A R         + P  L+   + 
Sbjct: 65  ATRKLFDQLGYR-YFVTVDEPHIESDYIYTKPIVALASRFPITHFEAVTPPCSLVQDYNV 123

Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQA 188
                +R+ +  +++     ++ V   HLKS    +S       +             +A
Sbjct: 124 ECPRFSRQPIYAVIDAADIGQVAVYVCHLKSQRATESNNPESDNALLGVWLSSQQRGWEA 183

Query: 189 QWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIRFPKEK 241
             L+ ++ Q  ++  +P  + GD N+ I                  +   DS + F +  
Sbjct: 184 VMLRHFMQQKYRDKPMPTALMGDMNQTILSDTTGMLVKDLKQLDNELKLEDSWLIFQESH 243

Query: 242 DS--RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLS 293
            S  R   + +      +DY ++ Q               Y   D        S+ K+ S
Sbjct: 244 PSAERAATHYHFARGNVLDYVLLSQEFQTHSSYSMADVSHYRVLDQHLINPNYSQDKQAS 303

Query: 294 DHCPISIDYDF 304
           DH  +++   F
Sbjct: 304 DHAFVAVTVRF 314


>gi|289774208|ref|ZP_06533586.1| secreted protein [Streptomyces lividans TK24]
 gi|289704407|gb|EFD71836.1| secreted protein [Streptomyces lividans TK24]
          Length = 274

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 80/284 (28%), Gaps = 56/284 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77
           + ++++NI+     + V            D   +    +   AD+V LQE+  +      
Sbjct: 34  LDVMTFNIHHAQGTDDVL-----------DLRRVANVIRKSGADVVGLQEVDKHYSARSD 82

Query: 78  --NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             +  A++     + + +      +      +   +   A+  +       +  L  +  
Sbjct: 83  WADQPAELAELLGYHVVFGANIDNSPPAPGGHRVQY-GTAILSRYPITASDNTWLYKSPG 141

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R  +   ++++GKK+   + HL +    D              QQ   + D I
Sbjct: 142 Q----EQRGLLHATLDVHGKKVEFYNTHLAAGSQAD------------RLQQTAQVVDLI 185

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
             +K    P ++ GDFN       +        +                          
Sbjct: 186 GTRK----PGILVGDFNALPAAPES----QPLQNAYTDAWAKSLHARGDGATYPAQSPTE 237

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            ID     +     + Q            +       SDH P+ 
Sbjct: 238 RIDLIYATRRVTPLVAQ------------VLKDDPAASDHRPLL 269


>gi|160875927|ref|YP_001555243.1| exonuclease III [Shewanella baltica OS195]
 gi|160861449|gb|ABX49983.1| exodeoxyribonuclease III [Shewanella baltica OS195]
 gi|315268120|gb|ADT94973.1| exodeoxyribonuclease III [Shewanella baltica OS678]
          Length = 270

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 80/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDSHQPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K      Q     G       A  R
Sbjct: 42  -------FPLAEVEAMGYQVHYHGGKAHYGVAMLSKVAPEKLQK----GFPTDDEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + V +       F       +        +  Q L  ++     +  
Sbjct: 91  MIIGTFAQANGRPLTVFN-----GYFPQGESIDHPTKYPAKRKFYQDLMHYLQTNHSNDE 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                               ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +   +    L++        + D       + S
Sbjct: 206 ERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYDLRGIDKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|87198716|ref|YP_495973.1| endonuclease/exonuclease/phosphatase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87134397|gb|ABD25139.1| Endonuclease/exonuclease/phosphatase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 245

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 82/286 (28%), Gaps = 59/286 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+++ S+NI+           K        D   +    + +DAD++ LQE      + +
Sbjct: 2   KLKVASYNIH-----------KGVGLDRRRDPDRILTVLREIDADVIALQEADRRFGLRE 50

Query: 83  VFPKNTWCIFYSTERLINHSKRD------SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                     +S  R++     D      S      A+ VR+    +   + PL      
Sbjct: 51  AVIPRAMLDDHSPWRVVEPGHYDRARTSSSMGWHGNALLVRRDIEVIDACAVPLPTL--- 107

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R AV   + + G  + VL +HL               S     QQ + +   I 
Sbjct: 108 ----EPRGAVCASLRLAGHVVRVLGMHLDL-------------SGLRRRQQIETICGHIE 150

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
              E      + GDFN      G    F   +              +   +  + R    
Sbjct: 151 DHPERGHAV-LMGDFNEWSPSGGALSAFADHLR-----------VLAPGRSFPSRRPVAQ 198

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D  V+               +              SDH P+  + 
Sbjct: 199 LDRIVVSDGL----------HVDAAGVHHSPLAAVGSDHLPVWAEL 234


>gi|114320344|ref|YP_742027.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226738|gb|ABI56537.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 575

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 90/311 (28%), Gaps = 34/311 (10%)

Query: 15  PCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           P     A +  +R+  +N+       G     ++         L       LDADIV L 
Sbjct: 274 PAPPERAGEGLIRVAGFNVENYFLTLGERGADSARALDRQRARL-LPALAALDADIVGLV 332

Query: 73  EMGS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           EM +   A+  +       +     R    +    +++I  ++  R   V  +      L
Sbjct: 333 EMENDRAALEDLVAALNDHLGADRYRAAPGTPDTGSDEIKVSLIYRPDRVERVGGPLRDL 392

Query: 132 GAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSF-CFLDSLENTYSPSCSLLSQQA 188
                      R  V+        G    V  +H K+     DS +      C  L +QA
Sbjct: 393 EPVHH------RPPVKAAFRPAAGGAPFAVAVVHHKAKVGCPDSDDIDRGQGCWNLRRQA 446

Query: 189 --QWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             + L + I + +E     +P +I GD N               +      +        
Sbjct: 447 QSEALLEAIGRWREDRADDLPVLIVGDVNAYGGEDPVR----ALLAGGKRDLLARHLPPE 502

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------KR 291
           R            +D+ +        +       I  +E  +                 R
Sbjct: 503 RRYTYVFRGESGYLDHALAPPRLADRVQAAGTWAINADEPRLLEYDARGIERRFRPGPWR 562

Query: 292 LSDHCPISIDY 302
            SDH P+ +D 
Sbjct: 563 SSDHDPVWVDL 573


>gi|84393754|ref|ZP_00992502.1| exodeoxyribonuclease III [Vibrio splendidus 12B01]
 gi|84375616|gb|EAP92515.1| exodeoxyribonuclease III [Vibrio splendidus 12B01]
          Length = 268

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 80/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   V  Q       +D       R
Sbjct: 42  -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPVSVQKGFPTDNEDHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+K+ VL+       F       +        +  + L  ++        
Sbjct: 91  MIMATFEDENGEKVTVLN-----GYFPQGDNIKHETKYPYKREFYKDLMTYLNDYHNKDE 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               ++ KT+     +  F     
Sbjct: 146 QVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGFVDSFRLLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q       +          D      ++ S
Sbjct: 206 EVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLADKCTEAGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|21218691|ref|NP_624470.1| secreted protein [Streptomyces coelicolor A3(2)]
 gi|5708245|emb|CAB52358.1| putative secreted protein [Streptomyces coelicolor A3(2)]
          Length = 279

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 80/284 (28%), Gaps = 56/284 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77
           + ++++NI+     + V            D   +    +   AD+V LQE+  +      
Sbjct: 39  LDVMTFNIHHAQGTDDVL-----------DLRRVANVIRKSGADVVGLQEVDKHYSARSD 87

Query: 78  --NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             +  A++     + + +      +      +   +   A+  +       +  L  +  
Sbjct: 88  WADQPAELAELLGYHVVFGANIDNSPPAPGGHRVQY-GTAILSRYPITASDNTWLYKSPG 146

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R  +   ++++GKK+   + HL +    D              QQ   + D I
Sbjct: 147 Q----EQRGLLHATLDVHGKKVEFYNTHLAAGSQAD------------RLQQTAQVVDLI 190

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
             +K    P ++ GDFN       +        +                          
Sbjct: 191 GTRK----PGILVGDFNALPAAPESRPLQ----NAYTDAWAKSLHARGDGATYPAQSPTE 242

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            ID     +     + Q            +       SDH P+ 
Sbjct: 243 RIDLIYATRRVTPLVAQ------------VLKDDPAASDHRPLL 274


>gi|126174923|ref|YP_001051072.1| exonuclease III [Shewanella baltica OS155]
 gi|153001253|ref|YP_001366934.1| exonuclease III [Shewanella baltica OS185]
 gi|217972826|ref|YP_002357577.1| exonuclease III [Shewanella baltica OS223]
 gi|125998128|gb|ABN62203.1| Exodeoxyribonuclease III [Shewanella baltica OS155]
 gi|151365871|gb|ABS08871.1| exodeoxyribonuclease III [Shewanella baltica OS185]
 gi|217497961|gb|ACK46154.1| exodeoxyribonuclease III [Shewanella baltica OS223]
          Length = 270

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 80/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDSHQPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K      Q     G       A  R
Sbjct: 42  -------FPLADVEAMGYQVHYHGGKAHYGVAMLSKVAPEKLQK----GFPTDDEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + V +       F       +        +  Q L  ++     +  
Sbjct: 91  MIIGTFAQANGRPLTVFN-----GYFPQGESIDHPTKYPAKRKFYQDLMHYLQTNHSNDE 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                               ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +   +    L++        + D       + S
Sbjct: 206 ERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYDLRGIDKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|239817089|ref|YP_002945999.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110]
 gi|239803666|gb|ACS20733.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110]
          Length = 250

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 83/288 (28%), Gaps = 51/288 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+ ++NI+           +        +   L    + LDADIV LQE+   N  
Sbjct: 5   AYNLRVATYNIH--------KGVQGIGLARRLEIHNLGHAIEQLDADIVCLQEVRKMN-R 55

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   W      + L                      A+  +   +      +    
Sbjct: 56  QAALRFERWPELPQADFLAPEGYTAVYETNAITRHGEHGNALLTRWPVIRTGHQDI---- 111

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S  R   R  + +++E+ G+ +  + +HL                     +Q   L+++
Sbjct: 112 -SDHRFEQRGLLHVVIEVEGRPVHAIVVHLGLIKGS-------------RVRQVARLREF 157

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I ++       V+AGDFN             +       L      +  R     +    
Sbjct: 158 IEREVPPGEAVVVAGDFNDWGAR-------MRYAMNAMGLRDTSDLRGPRTLTYPSRLPV 210

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +D+           +  S                R+SDH P+  D+
Sbjct: 211 AQLDFVY---GRELEPVACSVPRGPI--------WARMSDHLPLVADF 247


>gi|52840886|ref|YP_094685.1| hypothetical protein lpg0649 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627997|gb|AAU26738.1| exodeoxyribonuclease III [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 263

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 76/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +L SWN+N+L                      + Q+ ++   D++ +QE    +     
Sbjct: 9   FKLASWNVNSL----------------KVRLEQVLQWLESSQVDVLAMQETKLTDD---- 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     ++     +    S    +  +A+  +           +           R
Sbjct: 49  ------NFPVASFIDKGYHVIFSGQKTYNGVAIISRYPMT------DIQTDIPELEDPQR 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V    K I ++++++ +   L S +  Y             +  +I  +     
Sbjct: 97  RILAATV----KGIRLINLYVPNGGELTSDKYQYKLD------WLNKVTRFIQHEISIYS 146

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              + GDFN                           F K ++    L    +       A
Sbjct: 147 KVAVVGDFNIAPEDRDVYDPVEWEGCVLVSPPERQAFMKILELG--LHDSFRNFAQEEKA 204

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++         Q          D    + +R SDH P+
Sbjct: 205 FSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQS-------KIDKEPRKAERPSDHAPV 257

Query: 299 SIDYD 303
            ++ +
Sbjct: 258 WVELE 262


>gi|60681531|ref|YP_211675.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides fragilis NCTC 9343]
 gi|60492965|emb|CAH07743.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides fragilis NCTC 9343]
          Length = 361

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 89/304 (29%), Gaps = 68/304 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ ++N+++   ++                  +  Y K    DI+  QE     A 
Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSC-----------KEIAAYMKEHRVDIICFQEF----AG 144

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F  ++    ++  +      +  ++     +A+  K      +      +++     
Sbjct: 145 NRYFTPDSIRNAFADWQYAVIP-QAPDSTPILQVALFSKYPVKDSRLITYPDSRNCS--- 200

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179
                +   +++NG+ + V + HL++     +                            
Sbjct: 201 -----MWCDLDVNGQTVRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVARQLLEGL 255

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +    + QA+ L+  I     +  P ++ GDFN   +    +      +        F
Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPILVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                      +  +  + IDY    +                  D         SDH P
Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLNLCSDHNP 354

Query: 298 ISID 301
           + ++
Sbjct: 355 VVME 358


>gi|332883625|gb|EGK03906.1| hypothetical protein HMPREF9456_01447 [Dysgonomonas mossii DSM
           22836]
          Length = 285

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 84/298 (28%), Gaps = 37/298 (12%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +    +   ++ ++++NI        + +  +S+           +  +  D DI+ +Q
Sbjct: 14  FISSCKTKPLELNVMTFNIR-------LDVPSDSLNSWQYRKDNAAEMVRMNDVDILGMQ 66

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+              +                S            ++        P L 
Sbjct: 67  EVLLNQMNDLKERLPQYTAIGVGREDGADKGEFSPIFYKKDRFSAIESGTFWVSETPELA 126

Query: 133 AKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +  +  R A   ++  +  GK+I+ ++ HL      +          +LL ++A+ 
Sbjct: 127 GSKGWDASYIRVATWAILKEKATGKEIFAINTHL-----DNDGSIARKEGGNLLLKKAEE 181

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCN 246
           L           +P V+ GDFN         +         +  + ++       D   +
Sbjct: 182 L--------GKGLPIVLTGDFNDTPQSEAIKNITDASKTNHLLDSKTIALKTSGTDWTFH 233

Query: 247 ANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               L       IDY  + +               Y        G  +SDH  +    
Sbjct: 234 NFGRLAESERPLIDYIFVSKQ---------IKVQDYAVLPDTLNGTFVSDHKAVLSKL 282


>gi|17987376|ref|NP_540010.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
 gi|17983063|gb|AAL52274.1| exodeoxyribonuclease iii [Brucella melitensis bv. 1 str. 16M]
          Length = 296

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%)

Query: 13  LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            +PC A       +++ +WNIN                   +    L+ + +    DIV 
Sbjct: 24  CLPCPARAHNHYGMKIATWNING----------------VKARIDNLQHWLRESSPDIVC 67

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ S +                    + +            +A+  K           
Sbjct: 68  LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 117

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               D  +R      +E +   +   + V+ ++L +   +D+ +  Y  S        Q 
Sbjct: 118 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 166

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236
           L++W  ++     P V+AGD+N      +           +             N     
Sbjct: 167 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 226

Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +              +           ID+ ++   A    I  +  + +        
Sbjct: 227 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 279

Query: 288 RGKRLSDHCPISIDY 302
             ++ SDH P+++  
Sbjct: 280 AWEKPSDHVPVTVTL 294


>gi|464373|sp|P33377|PHL3_BACCE RecName: Full=Sphingomyelinase C; Short=SMase; AltName:
           Full=Cereolysin B; AltName: Full=SMPLC; AltName:
           Full=Sphingomyelin phosphodiesterase; Flags: Precursor
 gi|142674|gb|AAA91820.1| cerB [Bacillus cereus]
          Length = 333

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 94/272 (34%), Gaps = 31/272 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLFGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q + ++D+I  +   +    +I GD N        N        +KT++ +         
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTA 257

Query: 241 KD-SRCNANKNLRNK----IPIDYFVMDQNAY 267
              +  N+             +DY +  ++  
Sbjct: 258 TWDATTNSIAKYNFPDSLAEYLDYIIASKDHA 289


>gi|294635923|ref|ZP_06714368.1| exodeoxyribonuclease III [Edwardsiella tarda ATCC 23685]
 gi|291090755|gb|EFE23316.1| exodeoxyribonuclease III [Edwardsiella tarda ATCC 23685]
          Length = 269

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 83/310 (26%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L    +  + D++ LQE   ++ +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLAAIVEKHNPDVIGLQETKVHDDM--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  +   +  +      A+D+      R
Sbjct: 42  -------FPLQDLAPLGYHLHYHGQKGHYGVALLTRMAPLAVRKGFPGDAEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       S+    L+D++ Q      
Sbjct: 90  RIIMADIPTEQGVLTVIN-----GYFPQGESRDHPLKFPAKSKFYADLQDYLQQSLTPQD 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                          L     +   +     +  + +   
Sbjct: 145 QVLIMGDMNISPADIDIGIGDESRRRWLRSGKCSFLPEERAWMDRLLSWGLVDTYRQAHP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R +       +           ID  +  Q   +  +           D      ++ S
Sbjct: 205 ERDDRFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCVDSGI-------DYEIRAMEKPS 257

Query: 294 DHCPISIDYD 303
           DH PI  ++ 
Sbjct: 258 DHAPIWAEFT 267


>gi|254431951|ref|ZP_05045654.1| exodeoxyribonuclease III [Cyanobium sp. PCC 7001]
 gi|197626404|gb|EDY38963.1| exodeoxyribonuclease III [Cyanobium sp. PCC 7001]
          Length = 278

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 92/307 (29%), Gaps = 69/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL SWN+N                   +    +  + +    +++ LQE        ++
Sbjct: 1   MRLASWNVN----------------SVRTRLEQVTTWLEQERPEVLCLQE---TKVADEL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKDSFSRA 140
           FP + +           ++   S    +  +A+         +      L G  ++   +
Sbjct: 42  FPHDAFQEL-------GYATAISGQKAYNGVAILSLLPLEDVRIGFEALLPGDAEAQELS 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +R +  LV+     + VL++++ +   L S +  Y        Q    L+ ++  ++E
Sbjct: 95  TQKRVISALVD----GVRVLNLYVPNGSALRSEKYAYK------LQWLACLRRYLAVQEE 144

Query: 201 SLVPFVIAGDFNRKINYLGNND------------DFWKTIDP--NDSLIRFPKEKDSRCN 246
              P  + GDFN        +D               + +     D L    +  +    
Sbjct: 145 QGDPLCMLGDFNIGPEDRDLHDPDRLTGGIMASEAERQALREALGDRLTDAFRLFEPEAG 204

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  +              +             + SDH P
Sbjct: 205 HWSWWDYRTGAWDRDRGWRIDHIYLCDTLAACATGCRIHKHT-------RGNVQPSDHAP 257

Query: 298 ISIDYDF 304
           + ++  +
Sbjct: 258 VVVNLAW 264


>gi|331683257|ref|ZP_08383858.1| exodeoxyribonuclease III [Escherichia coli H299]
 gi|331079472|gb|EGI50669.1| exodeoxyribonuclease III [Escherichia coli H299]
          Length = 268

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALMTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|284034261|ref|YP_003384192.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813554|gb|ADB35393.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 252

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 36/281 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+ ++NI   S Q+G + W    +   +           LDA++V LQE+        
Sbjct: 4   QLRVATFNIRNSSAQDGDNSWPVRREVAVAAIA-------ALDAEVVGLQEVLPDQLADL 56

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 W I  +       +   S   +       + +      + P       +     
Sbjct: 57  RTAYPDWTIVGAGRDDGVAAGEHSVVMVRPGDWSVESDETRWLSADPATPGSVGWDAELT 116

Query: 143 RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R A  + +  ++G ++ VL+ H          E     S  LL + A           E 
Sbjct: 117 RIATLVRLRHVSGVRVGVLNTHY-----DHVGELAQVESSRLLDRWAAA---------EP 162

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P+V+ GDFN +           + +         P       +      +   ID+ +
Sbjct: 163 DRPWVLLGDFNAEPGSPP-----LQVLTEAGWTDAIPAAAGGTWHDFTGATDGQRIDHIL 217

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +          +  +       +   +  SDH P++   
Sbjct: 218 VSK---------PWQVVEAAVSYHRPANRLPSDHWPVAATL 249


>gi|149923487|ref|ZP_01911890.1| hypothetical protein PPSIR1_41059 [Plesiocystis pacifica SIR-1]
 gi|149815678|gb|EDM75207.1| hypothetical protein PPSIR1_41059 [Plesiocystis pacifica SIR-1]
          Length = 343

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 86/316 (27%), Gaps = 42/316 (13%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           YVL  +  L       A+ +R+VSWN+                     D   LRQ  + +
Sbjct: 42  YVLDPIGSLDSPPPRDAEHLRVVSWNLENFRGDP-----------EDHDLERLRQTIEAV 90

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           D DI+ +QE+    A+A + P             I  SK          +A R+  V ++
Sbjct: 91  DPDILAVQEIKDPEALAALLPG----------WGIALSKGGGRGHQKLGVAWRRDRVELV 140

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            Q       ++       R A         +                             
Sbjct: 141 GQPV---EHRELTLSGRVRPAFSAYFRDAARSSASEASPPLDLWVTVVHLKAMPTGHEDR 197

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----YLGNNDDFWKTIDPNDSLIRFPKE 240
           + Q   L + +    +     V+ GDFN            + +    + P D       E
Sbjct: 198 TTQWPALVEAVRGLSKRDPDHVVLGDFNSTGAPGEGTATEHAELDAALRPADLRRLPNSE 257

Query: 241 KDSRCNANKNLRNK---IPIDYFVMDQ-----------NAYKFLIQESFSEILYNEDDIK 286
             S                ID   +             ++          +    E   +
Sbjct: 258 GCSAYYDGARRDAWKEASEIDLVWVRGLEGALGADPAVHSGTHCAAHHCRDFRSTEAYPE 317

Query: 287 SRGKRLSDHCPISIDY 302
                LSDHCP+ +D 
Sbjct: 318 PDYSFLSDHCPVILDL 333


>gi|126735134|ref|ZP_01750880.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2]
 gi|126715689|gb|EBA12554.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2]
          Length = 332

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 91/331 (27%), Gaps = 51/331 (15%)

Query: 24  VRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMG 75
           +R+ ++N+   +        +    +   R           L      LDAD+V + E  
Sbjct: 1   MRIATYNVEWFNSLFDNTGALIDDDSWSSRWDVTKAQQTAGLGVVFGALDADVVMIIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             +                  R        +N+     + +   +V              
Sbjct: 61  DTSPHRDARKALAHFAARFDLRAREAVTGFTNDTQQEIVLLYDPDVLDAVHDPQNAADAP 120

Query: 136 SFSRAG---------------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--S 178
            F                   ++  +E+ +      + ++ +H KS     +  +     
Sbjct: 121 QFDGQFHMDVDVDAHPDPITWSKPPLEIALTTGSGPVRLIGVHAKSKAPHGARNDAEATR 180

Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226
            S     +Q      L+  + Q   +    ++ GDFN           F +         
Sbjct: 181 ISIQNRRKQLAQCVWLRKRVEQHLAAGEHLIVLGDFNDGPGLDEYEKLFGRSGIEIVLGE 240

Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQNAYK----FLIQE 273
                  DP+  ++   +   S   A          +  +DY ++ Q   +    + I  
Sbjct: 241 GAEEQLFDPHAQMVLSRRFGASPSTARFKRKGEPYLQALLDYVMVSQGLRQKAPIWQIWH 300

Query: 274 SFSEILYNEDDIKSRG-KRLSDHCPISIDYD 303
            F       D +   G    SDH P+ +D D
Sbjct: 301 PFDHPACYADVVLRDGLLAASDHFPVVLDID 331


>gi|218246518|ref|YP_002371889.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8801]
 gi|218166996|gb|ACK65733.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8801]
          Length = 1148

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 85/320 (26%), Gaps = 37/320 (11%)

Query: 16   CTASVAQKVRLVSWNINTLSEQEGVSLWK----NSVKRTTSDYTLLRQYAKNLDADIVFL 71
                V   +++ ++N+         +       +S          L      +DADI  L
Sbjct: 701  TPPDVGGSLKVANFNVLNYFTTIDDASNDARGADSSSEFQRQQDKLVTALLGIDADIFGL 760

Query: 72   QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV-RVLQQSYP 129
             E+ +   +A     N      +       +      D I   +  +   V  V   +  
Sbjct: 761  VELENNGDIAISNLVNVLNSETAPGTYDYIATGTIGTDAIKVGLIYKTSAVNPVGNYAIL 820

Query: 130  LLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCS----- 182
                  +F    NR  +    +    G+K+ V   H KS                     
Sbjct: 821  DSSVDPTFQDNLNRPVLAQTFQQIDTGEKVTVAVNHFKSKGTSGLTNTNDPNYDQGDGQG 880

Query: 183  ----LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                  +  A  L +W+     +     ++I GD N               I        
Sbjct: 881  FWNATRTDAANALVNWLATDPTNSGDSDYLIIGDLNSYAMEDPI-----TAIKNAGYTNL 935

Query: 237  FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------- 289
              +   +   +         +D+ + + +    +   +   I  +E ++           
Sbjct: 936  IEQFSGADAYSYVFDGQFGYLDHALSNSSLTSQVTGVAEWHINADEPNVFDYNEEFNPPS 995

Query: 290  ------KRLSDHCPISIDYD 303
                   R SDH P+ I  +
Sbjct: 996  LYSVDPYRTSDHDPVIIGLN 1015


>gi|311262545|ref|XP_003129235.1| PREDICTED: nocturnin-like [Sus scrofa]
          Length = 427

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 84/297 (28%), Gaps = 20/297 (6%)

Query: 18  ASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            S    +R++ WNI    L E ++          +      L+ +       DI+ LQE+
Sbjct: 137 PSSHPPIRVMQWNILAQALGEGKDNFVQCPLEALKWEERKCLILEEILAYQPDILCLQEV 196

Query: 75  GSY-NAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             Y +    +  +  +   +  +          +N     A+   +   +++  +   L 
Sbjct: 197 DHYFDTFHPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLT 256

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A    +      A+   +E    +                     +  C         L+
Sbjct: 257 AMTLKTNQ---VAIAQTLECRASRRQFCIAVTHLKARTGWERFRSAQGC-------DLLQ 306

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +     + + +P +I GDFN +            +++ + +      +  S         
Sbjct: 307 NLQNITQGAKIPLIICGDFNAEPTEEVYKHFASSSLNLSSAYKLLSADGQSEPPYTTWKI 366

Query: 253 N-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +  +DY    + A                 +        SDH  +  D+ F
Sbjct: 367 RTSGECRHTLDYIWYSRQALSVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 423


>gi|315498220|ref|YP_004087024.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
 gi|315416232|gb|ADU12873.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
          Length = 275

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 80/287 (27%), Gaps = 34/287 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A+ +RL+S+NI   + Q+                  +      L  D++ +QE      
Sbjct: 18  SAEPLRLMSYNIRYANPQDVPP--------WPERGPRMAAQIAFLAPDVLGVQEALLPMV 69

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    +  +         S   +          +           P   +KD+ + 
Sbjct: 70  DDLSQALGDYDHYGVGRDDGAKSGESTTVFWRRDRFEKVSATTQWCGQTPDTPSKDADA- 128

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           A  R    L +  + +   V D+    F   D +      +C++           ++   
Sbjct: 129 AFPRTITRL-ILKDKRSGQVFDVRNAHF---DHVGVKARENCAV---------QILSLPP 175

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKT--IDPNDSLIRFPKEKDSRCNANKNLRNK-IP 256
                 ++ GDFN  +          +T  +  +              N     +     
Sbjct: 176 VPGAHLIVLGDFNTGMGSAPYKRFTAETSPLKDSRVASTRRFGPTGTFNGFDIRQTDGEA 235

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ID+  +D+               +        GK +SDH PI  D +
Sbjct: 236 IDHIFVDRTLM---------VKSFATLTDSYSGKVISDHFPIVADIE 273


>gi|320535908|ref|ZP_08035979.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           phagedenis F0421]
 gi|320147245|gb|EFW38790.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           phagedenis F0421]
          Length = 255

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 83/281 (29%), Gaps = 33/281 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V++NI   +  +G + + +           + +       DI+  QE+  + +    
Sbjct: 1   MKIVTFNIRYDNPDDGKNAFIHRKS-------NIIEAINAHKPDIIGFQEVLPHVSAWLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +             +            +       L  +  + G++ +      R
Sbjct: 54  EQFPEYYFIGHGRSENFSDEHIVLGYKKMDYQLHHFRTFWLSPTPQVPGSRYTEQSICPR 113

Query: 144 RAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +  + E +  +   V + HL                     +  Q +   I    +  
Sbjct: 114 ICIHAIFETDRHRLFSVYNTHL------------DHEGVDARVKALQQIMQDIDSFSKPT 161

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--KIPIDYF 260
           +P V+ GDFN K      +      I  ND  ++          +  +  N     IDY 
Sbjct: 162 LPTVLMGDFNAKPTDEELHVLKEFKIKENDKNLQLNDLTKDIRGSFHDFGNCTPEKIDYI 221

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                    L   S  E         ++   LSDH P+ ++
Sbjct: 222 FATPEFL--LQNYSVWE---------NKAGFLSDHYPLEVE 251


>gi|34541082|ref|NP_905561.1| AP endonuclease domain-containing protein [Porphyromonas gingivalis
           W83]
 gi|34397397|gb|AAQ66460.1| AP endonuclease domain protein [Porphyromonas gingivalis W83]
          Length = 310

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 91/301 (30%), Gaps = 45/301 (14%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MG 75
           ++    +++++++N+     +   S   N           + +Y K   ADIV LQE + 
Sbjct: 41  SSIPQSRIKVMTYNVKGFDFRAHNSENPNP----------ILKYIKGSGADIVCLQEAVL 90

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           S  + ++     T+  +    R +  S    +    + + +  K   +     P   A +
Sbjct: 91  SRKSNSRYVGLRTFKKYLPEYRYMELSHAREDRKG-SGLMLLSKYPILDVHRIPYESAFN 149

Query: 136 SFS----RAGNRRAVELL--------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
             +        R+ + +            +G +   +    ++      +     P+ +L
Sbjct: 150 GSTAYTVDIQGRKVLVVNNHLESFRLTMADGTEYLKMVREGEAAALSRMMTAKMGPAYAL 209

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            + QA  +  +I          ++ GDFN        +         +     +      
Sbjct: 210 RAVQADSVSHYIRC--SESEHVIVCGDFNDTPISYARHKI------ASGLKDAYSDTGRG 261

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     K+ ID+ +       +             +    +    SDH P+     
Sbjct: 262 PGFTFNQGAFKVRIDHILYSSGFLAY-------------NCTVDKSVHASDHFPVWCYLV 308

Query: 304 F 304
           F
Sbjct: 309 F 309


>gi|121603898|ref|YP_981227.1| endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans
           CJ2]
 gi|120592867|gb|ABM36306.1| Endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans
           CJ2]
          Length = 375

 Score = 97.3 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 85/272 (31%), Gaps = 26/272 (9%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW------CIFYSTERLINHSK 103
                    +    L+AD++ + E      + ++F +          + ++    +    
Sbjct: 111 NEVATQNTARVIATLNADVLGVMEAEDRTTL-RLFNEQVLGETSIDHLLFNAYHHVMLVD 169

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDI 162
            + +  I   +  R+    +  +S+  +   D+     +R   E  +   +GK++WVL  
Sbjct: 170 GNDDRGIDVGLLTRRDYPVLSIRSH--VHDADAQGLIFSRDCAEYQLGLPSGKRLWVLLN 227

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-VPFVIAGDFNRKINYLGNN 221
           H KS           + + +   +QA  +++             V+ GD N        N
Sbjct: 228 HFKSK-----GYGEQAANNAKRKRQAARVREIYDAHLAEGDEWLVMMGDLNEVPGNAPLN 282

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS----- 276
               +     D       +   R   + N       DY ++    +  +           
Sbjct: 283 PLLREGSSLRDVAGHPQYDNGGRPGTHGNCTASGKFDYILLSPGLFDKVKAAGVERRGMW 342

Query: 277 -----EILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +  +  ++    +  SDH  + ++ D
Sbjct: 343 GGTNGTLWPHFKEVTRAEEAASDHAAVWVELD 374


>gi|259908294|ref|YP_002648650.1| Exodeoxyribonuclease III [Erwinia pyrifoliae Ep1/96]
 gi|224963916|emb|CAX55420.1| Exodeoxyribonuclease III [Erwinia pyrifoliae Ep1/96]
          Length = 268

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L+   +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  K   V  +       +D+      R
Sbjct: 42  FP-------LEEVASLGYHVFCHGQKGHYGVALLCKQQPVAVRRGFAGDNEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +        +  + L+ ++ Q++++  
Sbjct: 90  RIIMADILTPAGPLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLEQQQKADN 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
             +I GD N   +                           +     ++         +  
Sbjct: 145 QLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCSFLPEEREWMSTLMNWGLYDTWRTQNA 204

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  +      +           D      ++ 
Sbjct: 205 TVN-DRFSWFDYRSKGFDDNRGLRIDLILASRPLADRCVATGI-------DYDIRAMEKP 256

Query: 293 SDHCPISIDYD 303
           SDH PI  ++ 
Sbjct: 257 SDHAPIWAEFS 267


>gi|212704397|ref|ZP_03312525.1| hypothetical protein DESPIG_02452 [Desulfovibrio piger ATCC 29098]
 gi|212672118|gb|EEB32601.1| hypothetical protein DESPIG_02452 [Desulfovibrio piger ATCC 29098]
          Length = 269

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 80/310 (25%), Gaps = 72/310 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +RLVSWN+N L        W               ++      D++ LQE        K
Sbjct: 2   SIRLVSWNVNGLRAVSAKPEW---------------RWFAENTCDVIGLQE-------TK 39

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P+       S E    H         ++ +AV  +   +  +            +   
Sbjct: 40  AMPEQLKPEVASPEGWEAHWASSVVKKGYSGVAVFSRIKPLAVR----CELPQPEWQGEG 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCF-----LDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           R      + +  +K    + +  +                                +  +
Sbjct: 96  RI-----LHLEFEKFHFFNGYFPNGGAEELDENGKPIPGRFKRVPYKMGFFDAFTAYAEE 150

Query: 198 KKESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKD 242
            ++S  P V+ GDFN                   +L     F         +  F     
Sbjct: 151 CRKSK-PIVVCGDFNIAHKAIDLARPKQNEKNTGFLPEERAFLDRFTAMGYVDTFRHVHG 209

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      K           IDYF + +    ++      + +Y            S
Sbjct: 210 DVEGRYSWWSYKMRAREKNVGWRIDYFFVSEELKPYIRDAWIEDDVY-----------GS 258

Query: 294 DHCPISIDYD 303
           DHCP+ ++ D
Sbjct: 259 DHCPVGLELD 268


>gi|254228998|ref|ZP_04922419.1| exodeoxyribonuclease III [Vibrio sp. Ex25]
 gi|262394738|ref|YP_003286592.1| exodeoxyribonuclease III [Vibrio sp. Ex25]
 gi|151938466|gb|EDN57303.1| exodeoxyribonuclease III [Vibrio sp. Ex25]
 gi|262338332|gb|ACY52127.1| exodeoxyribonuclease III [Vibrio sp. Ex25]
          Length = 268

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 83/309 (26%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPIEAVEAMGYKVYFHGQKAHYGVAMLCKQEPLHVQK----GFPTDNEEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +  NG+K+ VL+       F      ++        Q  + L  ++     S  
Sbjct: 91  MIMATFLNENGEKVTVLN-----GYFPQGDNISHETKFPYKRQFYKDLMTYLNDHHNSDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ KT+        F K   
Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFEDTFRKLYP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +   +  +  I           D      ++ S
Sbjct: 206 EVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAQKCIDSGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|90579330|ref|ZP_01235140.1| putative exodeoxyribonuclease III [Vibrio angustum S14]
 gi|90440163|gb|EAS65344.1| putative exodeoxyribonuclease III [Vibrio angustum S14]
          Length = 268

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 87/306 (28%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+   +    D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  Q       +D+      R
Sbjct: 42  -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDDEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +    + +  K    +I + +  F       +        +    L +++     +  
Sbjct: 90  RMIMTTFKQDNGK----NITVMNGYFPQGDNIKHETKFPAKEKFYADLMNYLNTAHTNDE 145

Query: 204 PFVIAGDFNRKINYLGN---------------------NDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N     L                         ++ +T+     +  F +   
Sbjct: 146 ELIVMGDINISPTDLDIGIGPANAKRWLKTGKCSFQPVEREWLQTLLDWGFVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID  +   +  +  I+        + D      ++ S
Sbjct: 206 TVDDKYSWFDYRSKGFVDNRGLRIDVILATPSLAERCIES-------DIDYELRGIEKPS 258

Query: 294 DHCPIS 299
           DH PI 
Sbjct: 259 DHAPIW 264


>gi|117919355|ref|YP_868547.1| endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3]
 gi|117611687|gb|ABK47141.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3]
          Length = 870

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 101/378 (26%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66
             + +    +R+ S+N+          +      N    T          +      ++A
Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRAKIVSAITAMNA 514

Query: 67  DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +     K                 N +     T+      K   ++ I   
Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTADNAYSFVEITDEDKYDGKYFGSDAITVG 574

Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                  + ++       +  + A  R ++    +I+ +
Sbjct: 575 MLYRAGKVSLAGAARAIDTPEQHATAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 NLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALKDVKGDLLV 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  D++   +        W T+D                 +    K
Sbjct: 695 IGDMNAYGMEDPIRVLTDYDASKSERDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTK 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKFSGELAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ +   +
Sbjct: 815 ENAFSASDHDPVIVALSY 832


>gi|294677951|ref|YP_003578566.1| exodeoxyribonuclease III [Rhodobacter capsulatus SB 1003]
 gi|294476771|gb|ADE86159.1| exodeoxyribonuclease III-1 [Rhodobacter capsulatus SB 1003]
          Length = 259

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  + +  + D+V LQE+ S     + 
Sbjct: 1   MKIATFNING----------------IKARAEALPAWLRAAEPDVVLLQEIKST---DEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+              ++           +A+  +               D  +R    
Sbjct: 42  FPQEVLDG-------TGYTVHTHGQKSFNGVAILSRLPLEDVTRGLPGDDSDDQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V I  + + V  ++L +       +  Y  +          ++  +     S  
Sbjct: 92  --IEATV-IGTRAVRVCGLYLPNGNPAPGPKYDYKLA------WMARMQARVETLLRSEE 142

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
           P V AGD+N      +           +             N  L    + +        
Sbjct: 143 PLVFAGDYNVIPQDEDAAKPESWRADALALPETRAAFRRIVNLGLTDAFRARVPGPGQYS 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L            D     G++ SDH P+ I
Sbjct: 203 FWDYQAGAWQKNNGIRIDHLLLSPQAADLLRDAGI-------DKEVRAGEKPSDHVPVWI 255

Query: 301 DYD 303
           D D
Sbjct: 256 DLD 258


>gi|187927447|ref|YP_001897934.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J]
 gi|309779851|ref|ZP_07674606.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA]
 gi|187724337|gb|ACD25502.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J]
 gi|308921428|gb|EFP67070.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA]
          Length = 248

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 91/285 (31%), Gaps = 49/285 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80
           +R+ ++NI+             +          +RQ   ++DADIVFLQE+   N     
Sbjct: 4   LRVATYNIH----------KGVTGIARRVRVHDVRQGLHSMDADIVFLQEVQDRNDRLVA 53

Query: 81  AKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           A++F  N      +         + +       H   A+  +   +L ++  +     S 
Sbjct: 54  AELFDPNYTQLRYLATDVYPHTVYGRNAVYEHGHHGNAILSRFPILLSENLDI-----SD 108

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  +  + ++   ++ +L  H   F                  +QA+ L D +  
Sbjct: 109 HRFEQRGLLHAVTDLGFGEVHLLCAHFGLF-------------ARSRQRQAEALVDRVRS 155

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P V+AGDFN   N L       + +   +   +    +        +    + +
Sbjct: 156 VVPPDAPLVVAGDFNDWNNRLD--RTICQALGATEVADKAANAR--PVRTFPSHMPWLRL 211

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +              +I            + SDH P+  + 
Sbjct: 212 DRIYVRG-----------FDIERAHALTGREWAQRSDHVPLLAEL 245


>gi|92117300|ref|YP_577029.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14]
 gi|91800194|gb|ABE62569.1| Exodeoxyribonuclease III [Nitrobacter hamburgensis X14]
          Length = 266

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 87/305 (28%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ +WN+N                        L  +      D+V LQE+         
Sbjct: 1   MRIATWNVN----------------SVRQRLDHLLAWLGETAPDVVCLQEIKCVDEQFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +                      +A+  K      +        D  SR  
Sbjct: 45  EAIEALGYNVVTH------------GQKTFNGVALLSKFPFDETRPRLAGDDGDVQSRF- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E +V +    + +  ++L +    ++ +  Y        +    L ++  ++ +S
Sbjct: 92  ----LEGVVSLKHGVVRIACLYLPNGNPPNTEKYPYK------LKWISRLIEYSKERLKS 141

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
              FV+AGDFN                         + ++T+             D+  +
Sbjct: 142 EETFVLAGDFNVIPAPRDVYNPAAWVDDALFRPQTREAFQTLLGLGLTDALRAASDATGD 201

Query: 247 ANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                         N + ID+ ++   A   L            D      ++ SDH P+
Sbjct: 202 YTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLSAVGI-------DRHVRGWEKASDHVPV 254

Query: 299 SIDYD 303
            ID D
Sbjct: 255 WIDLD 259


>gi|307609446|emb|CBW98940.1| hypothetical protein LPW_07251 [Legionella pneumophila 130b]
          Length = 256

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 76/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +L SWN+N+L                      + Q+ ++   D++ +QE          
Sbjct: 2   FKLASWNVNSL----------------KVRLEQVLQWLESSQVDVLAMQET--------- 36

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      +     +    S    +  +A+  +           +           R
Sbjct: 37  -KLTDENFPVVSFTDKGYHVIFSGQKTYNGVAIISRYPMT------DIQTDIPELEDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V    K I ++++++ +   L S +  Y             +  +I  +     
Sbjct: 90  RILAATV----KGIRLINLYVPNGGELTSDKYQYKLD------WLNKVTRFIQHEISIYS 139

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              + GDFN   +                       F K ++    L    +       A
Sbjct: 140 KVAVVGDFNIAPDDRDVHDPVEWEGCVLVSPPERQAFMKILELG--LHDSFRNFAQEEKA 197

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++         Q          D    + +R SDH P+
Sbjct: 198 FSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQS-------KIDKEPRKAERPSDHAPV 250

Query: 299 SIDYD 303
            ++ +
Sbjct: 251 WVELE 255


>gi|295107237|emb|CBL04780.1| exodeoxyribonuclease III [Gordonibacter pamelaeae 7-10-1-b]
          Length = 285

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 76/312 (24%), Gaps = 60/312 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWN+N L   +                         LDADIV LQE          
Sbjct: 1   MRFISWNVNGLRAVQKKGFE---------------DIVCELDADIVALQETKLQEG-QAT 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDI-------HTAIAVRKKNVRVLQQSYPLLGAKDS 136
                +  ++S      +S                          R++   +P     D 
Sbjct: 45  LDLPQYREYWSYAEKKGYSGTAVFTKEQPLQVLHGLGSDYLDAEGRIVALEFPQFWFVDV 104

Query: 137 F-SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +   A N  A                  L+       +                 L    
Sbjct: 105 YTPNAQNELARIAHRMEWDDAFRDFCKGLEEGVLPADVPVQRPAPGEGHVC-ISELPLTQ 163

Query: 196 TQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKE 240
             +  +  P V+ GDFN                           +  +     +  F + 
Sbjct: 164 PGETAAPKPVVMCGDFNVAHQEIDLKNPGPNRGKAGFSDEERGKFTDLLEAGFVDTFRRL 223

Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                 A      +           IDYF++ ++    +      + +Y           
Sbjct: 224 HPDVTGAYSWWSYRFKARQNNAGWRIDYFLVSESLAPKVASACIYDEVY----------- 272

Query: 292 LSDHCPISIDYD 303
            SDHCP+ ++ +
Sbjct: 273 GSDHCPVGLELE 284


>gi|258445359|ref|ZP_05693550.1| sphingomyelinase [Staphylococcus aureus A6300]
 gi|257855877|gb|EEV78801.1| sphingomyelinase [Staphylococcus aureus A6300]
          Length = 330

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 58/298 (19%), Positives = 92/298 (30%), Gaps = 32/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS N+  LS      L+ N  +   +D      Y K  + D+V   E     A  K
Sbjct: 42  DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 95

Query: 83  VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T                  S       +A+  K     +  +      
Sbjct: 96  LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 155

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK I V+  H +S    DS          + ++Q + + D+
Sbjct: 156 -GFDNDSNKGFVYTKIEKNGKNIHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 210

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248
           + +          I GD N          D  K ++ ND L                  N
Sbjct: 211 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 269

Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
                   +DY   D++  +   L+ E  +E     D        +    SDH PI  
Sbjct: 270 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 327


>gi|256374352|ref|YP_003098012.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
           43827]
 gi|255918655|gb|ACU34166.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
           43827]
          Length = 821

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/331 (12%), Positives = 87/331 (26%), Gaps = 69/331 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG 75
           A+   ++ + ++N+  L+                + +  L           D+V L+E+ 
Sbjct: 488 ATGRHELSVATYNVENLAATND-----------QAKFDRLAAAVVANLRSPDVVVLEEIQ 536

Query: 76  SYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
             N  A                  V        +   + + N        +I        
Sbjct: 537 DDNGTANDGTVTASATYQRFTDAIVAKGGPRYQWRQIDPVNNADGGAPGGNIRVGFLFNP 596

Query: 119 KNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             V  + ++                      P      + +   +R+ +       G+ +
Sbjct: 597 GRVSFVDRAGGDATTPVSVVKSRGRAALSVSPGRIEPANEAWDASRKPLVGEFSFLGRTV 656

Query: 158 WVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDF 211
           +VL  H  S     ++   Y      S     +QA  LK ++ + K  +     V+AGD 
Sbjct: 657 FVLANHFNSKGGDQAMHGRYQEPVRSSEEQRLKQATLLKGFVDEVKSVDRGANVVLAGDL 716

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N             K  +    +        +   +     N   +D+ ++  N      
Sbjct: 717 NDYQFSP----VVAKLTEGGQVVDLMSTLPANERYSYVYEGNSQTLDHILLSSNVK---- 768

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                              + SDH P  +  
Sbjct: 769 ----RYRYDVVRINAEFADQASDHDPQVVKI 795


>gi|87307161|ref|ZP_01089306.1| probable secreted protein [Blastopirellula marina DSM 3645]
 gi|87289901|gb|EAQ81790.1| probable secreted protein [Blastopirellula marina DSM 3645]
          Length = 262

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 49/304 (16%)

Query: 1   MIRKYVLALV--FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           MIR  +  L+  + +   +A+  + +R++S+NI+     +G             D   + 
Sbjct: 1   MIRNLLTILLSLWCITTASAAQPEPLRILSYNIHHGEGVDG-----------KLDLPRIA 49

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              K++   +V LQE+  + A      +       +   +                A+  
Sbjct: 50  AVIKSVAPHLVLLQEVDCHTARTGNVDQAAELGKLTGMEVAF-GGNLRLGKGDYGNAILS 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +      +++ L    +  +R      V        +   VL  HL            + 
Sbjct: 109 RFPLTEVKNHSLPNLTNGETRGVLSAMVRFPSSTGDEPFLVLATHL-----------DHR 157

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
              +       +++  + +K+ +    +I GDFN  +            +          
Sbjct: 158 AGEADRLASIDFIRQLVGEKERTT---IIGGDFNATLESA--------VLKRFQEHWTLS 206

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +              ID+        +         I              SDH P 
Sbjct: 207 NLVEKPTFPVAKPER--QIDFVGYRP--MRRFRVGEVRVIDEAI---------ASDHRPF 253

Query: 299 SIDY 302
            ++ 
Sbjct: 254 LVEL 257


>gi|113969789|ref|YP_733582.1| exonuclease III [Shewanella sp. MR-4]
 gi|113884473|gb|ABI38525.1| Exodeoxyribonuclease III [Shewanella sp. MR-4]
          Length = 270

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 84/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 S    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RSRLHQLQALIDSHQPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  Q       +D    A  R
Sbjct: 42  -------FPLAEVEAMGYHVHYHGGKAHYGVAMLSKVAPIKVQKGFATDGED----AQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + VL+       F       +        +  Q L   +     +  
Sbjct: 91  MIIGTFAQANGRPLTVLN-----GYFPQGESIDHPTKYPAKRKFYQDLMAHLHANHSNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +   +    L++        + D       + S
Sbjct: 206 DRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYDLRGIDKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|300691333|ref|YP_003752328.1| exodeoxyribonuclease III [Ralstonia solanacearum PSI07]
 gi|299078393|emb|CBJ51043.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum PSI07]
          Length = 269

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 96/303 (31%), Gaps = 61/303 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L  +  +      +    +D T +         D++ LQE+   +    +
Sbjct: 1   MRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELKLPDDRYPL 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +             ++   +    +  +A+  +    + +   ++     F+    R
Sbjct: 50  AELDA----------AGYASLFTGQKTYNGVAILARKA-AMPEGRDVVKNIPGFADEQQR 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V    ++ G  + V+  +  +   LDS +  Y        +    L+DW+  +  +  
Sbjct: 99  -IVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLKAEMAAHP 151

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GDFN   +                       ++ ++    +  F     +     
Sbjct: 152 RLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALEGAGLVDAFRMFDQAD-KLF 210

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID+ ++  +  +              D +    ++ SDH P+ 
Sbjct: 211 SWWDYRLFAFKRNAGLRIDHILLSPDLARLCESCHI-------DRVPRGWEQPSDHTPVV 263

Query: 300 IDY 302
              
Sbjct: 264 AAL 266


>gi|86146435|ref|ZP_01064758.1| exodeoxyribonuclease III [Vibrio sp. MED222]
 gi|85835698|gb|EAQ53833.1| exodeoxyribonuclease III [Vibrio sp. MED222]
          Length = 268

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 80/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  Q       +D       R
Sbjct: 42  -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDNEDHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+KI VL+       F       +        +  + L  ++        
Sbjct: 91  MIMATFEDDNGEKITVLN-----GYFPQGDNIKHETKYPYKREFYKDLMTYLNDYHNKDE 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               ++ KT+     +  F     
Sbjct: 146 QVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGFVDSFRLLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q       +          D      ++ S
Sbjct: 206 EVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLADKCTEAGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|312796736|ref|YP_004029658.1| Exodeoxyribonuclease III [Burkholderia rhizoxinica HKI 454]
 gi|312168511|emb|CBW75514.1| Exodeoxyribonuclease III (EC 3.1.11.2) [Burkholderia rhizoxinica
           HKI 454]
          Length = 259

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 89/304 (29%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN+L                      +  +      D++ LQE+         
Sbjct: 1   MKIATWNINSL----------------KVRLQHVIDWLAMSRVDVLCLQELK-------- 36

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P + +    +      +    S    +  +A+  ++   + ++  +      F     R
Sbjct: 37  LPDDKYPR--AALEAAGYRSWFSGQKTYNGVAILVRDGLPVDEAVVIRNIP-GFDDLQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++     + V+  +  +     + +  Y  S          L++W+  +  +  
Sbjct: 94  -LIAATID----GVRVVSAYFPNGQAPGTDKFAYKLS------WLAALREWVAAEMRAHP 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            F + GD+N                         D ++++     +  F   +     + 
Sbjct: 143 QFALTGDYNIAPEDRDVHDPQAWEGQNLVSPEERDAFRSLVELGLVDAFRCFEQPD-KSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++  +  +              D    R  + SDH P+ 
Sbjct: 202 SWWDYRMLAFRRNAGLRIDHILLSPSLAQCCSACEI-------DKTPRRWDQPSDHAPVI 254

Query: 300 IDYD 303
              +
Sbjct: 255 ATLE 258


>gi|304394302|ref|ZP_07376225.1| exodeoxyribonuclease III protein [Ahrensia sp. R2A130]
 gi|303293742|gb|EFL88119.1| exodeoxyribonuclease III protein [Ahrensia sp. R2A130]
          Length = 269

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 85/310 (27%), Gaps = 69/310 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+   + +WNIN                       L+ ++      D++ LQE+     V
Sbjct: 2   AKPFSIATWNIN----------------SVRLRIGLVEKFLAEHQPDVLCLQEI---KCV 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++FP + +                     +  +A   K+      S   +   D+    
Sbjct: 43  NELFPADAFTAA------GYPHHAVHGQKGYHGVATVSKHPLTETASADYVAMGDTRH-- 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                VE +V+  G  + + + ++ +    D  +   +P      +  + +K       +
Sbjct: 95  -----VECIVQSPGGPVRMHNFYVPAG--GDVADPAVNPKFDHKMKFIEEMKAL--GCDD 145

Query: 201 SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             VP ++ GD N                   +     D   + +          +   + 
Sbjct: 146 GDVPAILVGDLNIAPLETDVWSHKQLLKVVSHTPVETDGLNEVMAKGGWTDLIRQHIPAE 205

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+          L +                 ++ SD
Sbjct: 206 DILFTWWSYRSKDWDAADKGRRLDHIWSSPKLASSLSK-------IEVLREARGWEKPSD 258

Query: 295 HCPISIDYDF 304
           H P+   +DF
Sbjct: 259 HVPVIARFDF 268


>gi|282890589|ref|ZP_06299112.1| hypothetical protein pah_c022o186 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499586|gb|EFB41882.1| hypothetical protein pah_c022o186 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 330

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 96/322 (29%), Gaps = 57/322 (17%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           +KY       ++       +K+R+V++N+ +    E +    +  +R       +    +
Sbjct: 41  QKYSYPQFLEILAALQKHKEKLRIVTYNVLSNRYDENLEEVNHWSQR----LPKIVGLIE 96

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
            +D DI+ +QE+   + + ++         +  +  +        +     I  RK    
Sbjct: 97  EMDPDILGVQELY-PDQLKELHAYLRGAYAFYGKPCV--------DGEINGIFFRKNRFL 147

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           V  +    L              ++L   I GK + + + HL                  
Sbjct: 148 VQDRQVWYLDENPKDPSTETLTMLKLKDLITGKLLAIFNTHLAMQP------------IE 195

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-------------KTID 229
               +A+ + + I +     +P ++ GD N   N     D  +             K ++
Sbjct: 196 KRELEARLISEHIQKHASH-LPIILTGDLNTFPNRPDLIDLPFYDGDYILSILKGKKFLN 254

Query: 230 PNDSLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
               +             +               + +D+ ++  +   ++       +  
Sbjct: 255 DAKDISLLGHLGPLATFTSNGKDSTPFKGIGLPGVFLDHIMVSNDIQVWVHAVQAGTV-- 312

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                   G   SDH P+  D 
Sbjct: 313 -------EGHFPSDHMPVIADI 327


>gi|145589433|ref|YP_001156030.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047839|gb|ABP34466.1| Exodeoxyribonuclease III [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 282

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 85/313 (27%), Gaps = 66/313 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNA 79
              +R+ +WN+N+L              R       L+   +     D + LQE+   + 
Sbjct: 2   TDSIRIAAWNVNSL------------KVRLPHVIRWLKDQEQANQPIDALCLQELKLTDD 49

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV------RKKNVRVLQQSYPLLGA 133
                        +       +    +    +  +A+                ++     
Sbjct: 50  ----------KYPHQELEDEGYVSLAAGQKTYNGVAIIVRKAALAPIASDESTTFLKQAR 99

Query: 134 KDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                    +R +   +   G + I ++  +  +    DS +  Y           Q L+
Sbjct: 100 NIPGFEDEQQRILAATIPFAGMQPIRLISAYFPNGQSPDSDKFAYK------LNWMQSLE 153

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIR----------FP 238
           DW+ Q+ +S     + GDFN        +D         + P +                
Sbjct: 154 DWLVQELQSNTRLALLGDFNIAPADADVHDPKAWEGQNLVSPPERAAFESLIKLGLCDSF 213

Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +  +           ++          ID+ ++     +              D +    
Sbjct: 214 RIFEQTPKTYSWWDYRMMGFRRNAGMRIDHILLSDPLKEKCSASFV-------DKLPRSW 266

Query: 290 KRLSDHCPISIDY 302
           ++ SDH P+  + 
Sbjct: 267 EQPSDHAPVVAEI 279


>gi|254286781|ref|ZP_04961735.1| exodeoxyribonuclease III [Vibrio cholerae AM-19226]
 gi|150423208|gb|EDN15155.1| exodeoxyribonuclease III [Vibrio cholerae AM-19226]
          Length = 268

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L+        D++ LQE  +       
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A+  K   V      + G         
Sbjct: 45  QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDNEEHQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    + NG+K  +L+       F       +        Q  + L  ++ + + +
Sbjct: 89  KRMIMATFADQNGQKTTILN-----GYFPQGDNVEHKTKFPYKRQFYRDLMTYLREHRSN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
               V+ GD N                        ++     ++ +T+     +  F + 
Sbjct: 144 SERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +      +   +          D       +
Sbjct: 204 HPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDK 256

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 257 PSDHAPIWATF 267


>gi|325269228|ref|ZP_08135847.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           multiformis DSM 16608]
 gi|324988457|gb|EGC20421.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           multiformis DSM 16608]
          Length = 326

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/336 (9%), Positives = 84/336 (25%), Gaps = 46/336 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRT 50
           +R  ++ +   L         ++ +V  N   L +    +L ++              + 
Sbjct: 1   MRLALIFIFTVLTTLQTFAQSRLTVVELNAENLFDTRHDTLKEDREFLPDSPRHWTRTKY 60

Query: 51  TSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102
                   Q               DIV L E+ + + +  +  ++        +    + 
Sbjct: 61  WEKLNRTGQTLIACGEDGSGWHLPDIVGLCEVENDSVLFDLTRRS-----LLRKARYEYV 115

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLD 161
              S +     +A+              +           R  + +  E+ NG  + V  
Sbjct: 116 MTASGDVRGIDVALLYSPFSFRLIRADTIRVAPILDMRPTRDILHVEGEVENGDTLHVFL 175

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           +H  S    +     +          A            S    ++ GDFN   +     
Sbjct: 176 VHAPSRMGGELYSRPFRKHVVNRLCDAVDSLRLCH----SDPKVLVMGDFNDYPDSPSLQ 231

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS----- 276
             +   +     +    +  +      +       +D  ++ +N  + +           
Sbjct: 232 TAYTHGLVN---VSAEARGSNGAKGTYRYHGAWGSLDQILVSENLRERVSGCHVHDAVFL 288

Query: 277 ---------EILYNEDDIKSRGKRLSDHCPISIDYD 303
                           +        SDH P+ +  +
Sbjct: 289 LEPDEKYGGVKPRRNYNGMRYNNGFSDHLPLVLHLE 324


>gi|284031647|ref|YP_003381578.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283810940|gb|ADB32779.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 803

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/329 (12%), Positives = 88/329 (26%), Gaps = 66/329 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              S A +V + ++N+  L   +G + +    +    +             DI+ L+E+ 
Sbjct: 481 TAPSSALQVSVATFNVENLDPSDGPAKFDGLAQAVVKNLA---------SPDILALEEVQ 531

Query: 76  SYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             +                     +      +  +   + +      +   +I  A   R
Sbjct: 532 DNDGATNSGSTGADLTLNTLAAAIRAAGGPKY-AWRQIDPVDGEEGGEPGGNIRVAFMYR 590

Query: 118 KKNVRVLQ-----------------------QSYPLLGAKDSFSRAGNRRAVELLVEING 154
                                           + P      + + A  R  +      +G
Sbjct: 591 TDRPVKFVDRPGGGSTTATAVTADKFGRPHLSASPGRVDPANPAWASARVPLAGEFSWHG 650

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIA 208
           + ++V+  H  S    D L     P    S +   +QA+ ++ ++ Q   K+     ++ 
Sbjct: 651 QSLFVVVNHFSSKGGDDPLWGRTQPPVQSSAAKRHEQARSVRGFVDQILAKDRGANVIVL 710

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GD N          D                       +     N   +D  ++ QN   
Sbjct: 711 GDINDFEFSTTT--DILVGSGRTTLTSLPRTLPAKERYSYVFEGNSQILDQILISQNLR- 767

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                    +     D      ++SDH P
Sbjct: 768 LASSYDIVHMNAEFPD------QISDHDP 790


>gi|212634722|ref|YP_002311247.1| exonuclease III [Shewanella piezotolerans WP3]
 gi|212556206|gb|ACJ28660.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Shewanella
           piezotolerans WP3]
          Length = 268

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 92/310 (29%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+    +   D++ LQE        + 
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDSHQPDVIGLQE---TKVHDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP        +    + +         H  +A+  K   +  Q     G       A  R
Sbjct: 42  FP-------LADVEAMGYKVHYHGGKAHYGVAMLSKAEPLKVQK----GFPTDEEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++ NG+++ VL+       F      ++        +  + L  ++ +   +  
Sbjct: 91  MIMGTFMQENGRQLTVLN-----GYFPQGDNISHETKYPAKRKFYKDLMVYLNEHHSADE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGLVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +R         +           ID  +  ++    L++        + D      ++ S
Sbjct: 206 TRTERYSWFDYRSKGFVDNRGLRIDVVLATKSLAARLVES-------DVDYDLRGIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 259 DHAPIWSSFS 268


>gi|309379045|emb|CBX22347.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 256

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +N               S      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHF-----GLPSLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPKKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGVF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++     + L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDV-------RVDLDTRALERPSDHAPVT 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|300705174|ref|YP_003746777.1| metal dependent endonuclease/phosphatase [Ralstonia solanacearum
           CFBP2957]
 gi|299072838|emb|CBJ44194.1| putative metal dependent endonuclease/phosphatase [Ralstonia
           solanacearum CFBP2957]
          Length = 248

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 92/286 (32%), Gaps = 49/286 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----A 79
           +R+ ++NI+             +          +RQ    +DADIVFLQE+   N    A
Sbjct: 4   LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53

Query: 80  VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                P  T   + +T       + +    +  H   A+  +   +L ++  +     S 
Sbjct: 54  AELFDPSYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDI-----SD 108

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  +  + ++   ++ +L  H   F                  +QA+ L + +  
Sbjct: 109 HRFEQRGLLHAVTDLGFGEVHLLCAHFGLF-------------ARSRQRQAEALIERVRS 155

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
              +  P V+AGDFN   N L       + +   +   +    +        +    + +
Sbjct: 156 VVPTDAPLVVAGDFNDWNNRLD--RVICQALGATEVADKAAGAR--PLRTFPSHLPWLRL 211

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +              +I            + SDH P+  +  
Sbjct: 212 DRIYVRG-----------FDIERAHALTGRDWAQRSDHVPLLAELS 246


>gi|148360698|ref|YP_001251905.1| hypothetical protein LPC_2645 [Legionella pneumophila str. Corby]
 gi|296106237|ref|YP_003617937.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy]
 gi|148282471|gb|ABQ56559.1| hypothetical protein LPC_2645 [Legionella pneumophila str. Corby]
 gi|158512142|gb|ABW69103.1| exodeoxyribonuclease III [Legionella pneumophila]
 gi|295648138|gb|ADG23985.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy]
          Length = 256

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 76/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +L SWN+N+L                      + Q+ ++   D++ +QE    +     
Sbjct: 2   FKLASWNVNSL----------------KVRLEQVLQWLESSQVDVLAMQETKLTDD---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     ++     +    S    +  +A+  +           +           R
Sbjct: 42  ------NFPVASFTDKGYHVIFSGQKTYNGVAIISRYPMT------DIQTDIPELEDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V    K I ++++++ +   L S +  Y           + +  +I  +     
Sbjct: 90  RILAATV----KGIRLINLYVPNGGELTSDKYQYKLD------WLKKVTRFIQHQLSIYS 139

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
              + GDFN        +D                 F + ++    L    +       A
Sbjct: 140 KVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPAERQAFMEILELG--LHDSFRNFAQEEKA 197

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++         Q          D    + +R SDH P+
Sbjct: 198 FSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQS-------KIDKEPRKAERPSDHAPV 250

Query: 299 SIDYD 303
            ++ +
Sbjct: 251 WVELE 255


>gi|325267794|ref|ZP_08134444.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394]
 gi|324980675|gb|EGC16337.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394]
          Length = 258

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 81/304 (26%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      DI+ LQE          
Sbjct: 1   MKICTWNVNSLN----------------VRLPHVTDWLAQHQPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +   ++      S    +  +A+  ++           G          R
Sbjct: 35  LKLEHDKFPVAALNMMGWQCAWSGQKTYNGVAIISRHAIKDVH----TGLPALPDDPQQR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + V++++  +   LDS +  Y        Q    L D+I Q+ +   
Sbjct: 91  VIAATV-----NGVRVVNVYCVNGESLDSEKFAYKR------QWFAALTDFIRQQMQQYP 139

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +              +  +  
Sbjct: 140 KLVLLGDFNIAPTDDDVYDPEKWREHIHCSSEERAWFQALLDLGLTDCLRHVHPTGAH-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +        L            D      +R SDH P+ 
Sbjct: 199 TWWDYRGAMFQRKLGLRIDHILATAALRDVLRDVQI-------DTEARAKERPSDHAPVF 251

Query: 300 IDYD 303
             +D
Sbjct: 252 ALFD 255


>gi|59712190|ref|YP_204966.1| exonuclease III [Vibrio fischeri ES114]
 gi|59480291|gb|AAW86078.1| exonuclease III [Vibrio fischeri ES114]
          Length = 268

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 79/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+      + D++ LQE+  +N +   
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHNPDVIGLQEIKVHNEM--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q       ++       R
Sbjct: 42  -------FPVEAVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQYGFDTDTEEHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      +G K+ +++       F       +        Q  + L   +     +  
Sbjct: 91  MIMTTHQREDGSKVTIMN-----GYFPQGDNIKHETKFPYKRQFYKDLMTHLHTHHTNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ +T+        F     
Sbjct: 146 EIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSFQPEEREWLQTLKDWGFEDTFRNLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +          +          D      ++ S
Sbjct: 206 EVTDQFSWFDYRSKGFVDNRGLRIDVIMATPTLAVKCTESGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|29347026|ref|NP_810529.1| hypothetical protein BT_1616 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253572661|ref|ZP_04850062.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 1_1_6]
 gi|29338924|gb|AAO76723.1| endonuclease/exonuclease/phosphatase family [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251837793|gb|EES65883.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 1_1_6]
          Length = 373

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 91/328 (27%), Gaps = 57/328 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD----AD 67
             R++SWN+  L +    +L  ++             +       + +    +       
Sbjct: 52  PFRVMSWNVENLFDTHHDTLKNDNEFLPDAIRHWNYTKYKKKLADMARVITAVGEWNPPA 111

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V L E+ + + +  +  ++          + +         I  A+  ++   ++L   
Sbjct: 112 LVGLCEVENDSVLRDLTQRSPLKELGYRYVMTSSPDL---RGIDVALLYQRDLFKLLS-- 166

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLS 185
           +  +           R  + +  + + G  + V+  HL S          Y   +  +L 
Sbjct: 167 FRSIPIPSFKHHRPTRDLLHVSGLLLTGDTLDVIVCHLPSRSGGAKESEPYRLHAARILR 226

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---------IDPNDSLIR 236
            +A  L +            VI GDFN         +    T                + 
Sbjct: 227 TEADSLLN-----IRLHPQLVIMGDFNDYPTNKSIKEILEATAPKHSVTFPNPRKLYHLL 281

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------------------IQESF 275
             K       + K       +D+ ++  N                           ++  
Sbjct: 282 ARKATSRHFGSYKYHGEWGLLDHLIVSGNLLDASSKFFTGEDKANVARLPFLLTEDKKYG 341

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +  +           +SDH PI  D++
Sbjct: 342 DDEPFRTYKGMKYQGGISDHLPIYADFE 369


>gi|329724164|gb|EGG60682.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis VCU144]
 gi|329735747|gb|EGG72028.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis VCU028]
          Length = 327

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ + N+  L      +++ N  +   +D      Y +  + D+V L E+    A  
Sbjct: 35  DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 88

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133
           ++  +      Y T  +   ++   N              + +  K   V Q+ + +   
Sbjct: 89  RLLTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 147

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 AGN+    + +  NGK   ++  HL++    +           +   Q   +K 
Sbjct: 148 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMSEIKQ 203

Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +I  +      P  I GD N  I            ++ +              ++N   +
Sbjct: 204 FIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 262

Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                     +DY ++D++  +     + +  + + +       +       SDH P+S
Sbjct: 263 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 321


>gi|218263783|ref|ZP_03477768.1| hypothetical protein PRABACTJOHN_03458 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222514|gb|EEC95164.1| hypothetical protein PRABACTJOHN_03458 [Parabacteroides johnsonii
           DSM 18315]
          Length = 351

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/355 (11%), Positives = 94/355 (26%), Gaps = 67/355 (18%)

Query: 7   LALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDY 54
           +      +    S  Q   R++S+N+  L + +      +           +  R     
Sbjct: 1   MTFFILTLFSLPSQGQTDFRVMSYNVENLFDTKDDPFTADNDFLPSGNRHWTPGRFYHKL 60

Query: 55  TLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
             L +            +V L E+ + + + ++     +            +       I
Sbjct: 61  QQLAKVITAAGEWSTPALVGLCEVENDSVLVRLLN---YTPLRRQHYRYCMTHGQDTRGI 117

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCF 169
           + A+  ++   R    +   +           R  + +  + I G +I V   H  S   
Sbjct: 118 NVALLYQRDKFRYRGHTEHPVRFTRKQH-KHTRNILHVWGDVITGDRIDVFVCHFPSRYG 176

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-- 227
            +          +      + L D +          +I GDFN   + +   +  +    
Sbjct: 177 GEKESEPDRLDAART---LRVLCDSL-HHLHPAPHILIMGDFNDTPDDMSIREILYAHPF 232

Query: 228 ----IDPND---------------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
               +  +D                   F K+K     ++K       +D  ++  +   
Sbjct: 233 PISCLSGSDSMPMKSRTDAYPSLHLYNLFAKDKPFFPGSHKYQGEWSQLDQLILSSSLTD 292

Query: 269 -----FLIQESFSEI----------------LYNEDDIKSRGKRLSDHCPISIDY 302
                 +I  S                     +            SDH P+ +D+
Sbjct: 293 TTSRMQVIPGSARIFSPPFLLTKDKTWRGERPFRTYYGFKYEGGYSDHLPLIVDF 347


>gi|153833025|ref|ZP_01985692.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01]
 gi|148870746|gb|EDL69652.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01]
          Length = 317

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 95/309 (30%), Gaps = 30/309 (9%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +   + N+       G         S+       T  +     L+ DI+ LQE+ S N  
Sbjct: 7   ITFTTANLLNFVAPPGAYYDFENIYSLDDWQDKLTWTKSQFDQLNPDIIGLQEVFSINET 66

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
              F +  +  +++     +       +    A+A R         ++    L    D  
Sbjct: 67  QTFFAEIGYQ-YFACVDTPHIEGDYIYSRPVVAVASRFPIESFEAVTFDKDTLNAFGDID 125

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLLSQQAQ 189
           +   +R+ V   +       I V   HLKS    D       S       S      +A 
Sbjct: 126 APPFSRKPVRATIIHPIIGHICVYVTHLKSQRPADSETPEQASRPIARWLSTQQRGWEAA 185

Query: 190 WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDP--------NDSLIRFPKE 240
            L+D + +   +   P ++ GD N+ I     N+   +            +   ++    
Sbjct: 186 MLRDAMQKHYANNPMPTLLMGDMNQAITQTSVNNVLVEQYGDSVTDLRLCDGWELQVAPS 245

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSD 294
            +SR   + +      +DY ++ Q               Y   D         R K  SD
Sbjct: 246 LESRPATHYHFAKGNVLDYILLSQEFDAHADVSIAEVTNYQVLDAHLINPSFERDKNASD 305

Query: 295 HCPISIDYD 303
           H  +++  +
Sbjct: 306 HAFVALTVE 314


>gi|171318391|ref|ZP_02907548.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
 gi|171096399|gb|EDT41299.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
          Length = 269

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 86/286 (30%), Gaps = 56/286 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  A   + +R+ ++NI                   T     + Q    LDAD++ LQE+
Sbjct: 20  PAAAPGGRDLRIATYNIRG-----------GYGAWHTRAADRIAQVIHELDADVIALQEV 68

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                 A     +      +T             +     AV  +      ++  L    
Sbjct: 69  PLGGTHAHDVLAHLRD---ATGMHAVAGPTIDTPERRYGNAVLSRCPVRAARTLDL---- 121

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            SF +   R A++  ++ +   I V+  HL               S    S Q Q L   
Sbjct: 122 -SFHQREPRGALDADIDCSAGTIRVVATHLGL-------------SARERSAQVQRL--- 164

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +       +P ++ GD N         + F +       + RF +    R          
Sbjct: 165 LAAFDTGAMPVILMGDIN---------EWFVRGRALRALVTRFRRAPAPRTFPTLYPMFS 215

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +D   +     ++L+  +    +          +R SDH P+  
Sbjct: 216 --LDRIWIHPG--EWLVDVNVHRSVR--------ARRASDHYPLVA 249


>gi|297208971|ref|ZP_06925374.1| Sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|46591|emb|CAA43885.1| Sphingomyelinase [Staphylococcus aureus]
 gi|619317|gb|AAB32218.1| beta-hemolysin [Staphylococcus aureus]
 gi|296886361|gb|EFH25291.1| Sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|323439885|gb|EGA97601.1| beta-hemolysin [Staphylococcus aureus O11]
          Length = 331

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 92/298 (30%), Gaps = 32/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS N+  LS      L+ N  +   +D      Y K  + D+V   E     A  K
Sbjct: 43  DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 96

Query: 83  VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T                  S       +A+  K     +  +      
Sbjct: 97  LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 156

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK + V+  H +S    DS          + ++Q + + D+
Sbjct: 157 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 211

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248
           + +          I GD N          D  K ++ ND L                  N
Sbjct: 212 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 270

Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
                   +DY   D++  +   L+ E  +E     D        +    SDH PI  
Sbjct: 271 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 328


>gi|323455247|gb|EGB11116.1| hypothetical protein AURANDRAFT_62056 [Aureococcus anophagefferens]
          Length = 446

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 91/321 (28%), Gaps = 60/321 (18%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKN----SVKRTTSDY--TLLRQYAKNLDADIVFLQE 73
            ++ +++V WNI   +       +      S  R   ++    +      L  D+V LQE
Sbjct: 59  ASKPLKVVVWNIQYGAGIRQHFFYDGGDAVSTPRHEVEFHTEAIGDALAALAPDVVLLQE 118

Query: 74  MGSYNAVAK----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           +   +A                   +  + +   +                 +H A   R
Sbjct: 119 VDRRSARTHRIDELAVVGEKLAAVGLVNRASAAYWRVPYVPHPKHDHVGRIGMHLATFSR 178

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                  +   PLL           RRAV          + +L+ HL +F F D      
Sbjct: 179 YALGGATRYQLPLLKESRLRRLFNLRRAVLATPLAGDSAVTLLNTHLSAFSFGDGTVER- 237

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------------YLGNNDD 223
                    Q   L++ I         +++AGDFN                  Y  +   
Sbjct: 238 ---------QVAALRETI--LPRQTRNWLLAGDFNSLTPYEAAATLSKDEAALYPEDETP 286

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                     L   P+++        +      ID+      A             +++ 
Sbjct: 287 VAPLYASTVPLWASPEDRIDTYKPWTSPAPDRTIDHAFASPGAA------------FSDA 334

Query: 284 DIKSRGKRLSDHCPISIDYDF 304
            ++     LSDH P+S+   +
Sbjct: 335 KVERTDGYLSDHQPVSLTVTW 355


>gi|283471236|emb|CAQ50447.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 330

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 92/298 (30%), Gaps = 32/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS N+  LS      L+ N  +   +D      Y K  + D+V   E     A  K
Sbjct: 42  DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 95

Query: 83  VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T                  S       +A+  K     +  +      
Sbjct: 96  LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 155

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK + V+  H +S    DS          + ++Q + + D+
Sbjct: 156 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 210

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248
           + +          I GD N          D  K ++ ND L                  N
Sbjct: 211 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 269

Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
                   +DY   D++  +   L+ E  +E     D        +    SDH PI  
Sbjct: 270 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 327


>gi|256790330|ref|ZP_05528761.1| secreted protein [Streptomyces lividans TK24]
          Length = 279

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 80/284 (28%), Gaps = 56/284 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77
           + ++++NI+     + V            D   +    +   AD+V LQE+  +      
Sbjct: 39  LDVMTFNIHHAQGTDDVL-----------DLRRVANVIRKSGADVVGLQEVDKHYSARSD 87

Query: 78  --NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             +  A++     + + +      +      +   +   A+  +       +  L  +  
Sbjct: 88  WADQPAELAELLGYHVVFGANIDNSPPAPGGHRVQY-GTAILSRYPITASDNTWLYKSPG 146

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R  +   ++++GKK+   + HL +    D              QQ   + D I
Sbjct: 147 Q----EQRGLLHATLDVHGKKVEFYNTHLAAGSQAD------------RLQQTAQVVDLI 190

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
             +K    P ++ GDFN       +        +                          
Sbjct: 191 GTRK----PGILVGDFNALPAAPES----QPLQNAYTDAWAKSLHARGDGATYPAQSPTE 242

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            ID     +     + Q            +       SDH P+ 
Sbjct: 243 RIDLIYATRRVTPLVAQ------------VLKDDPAASDHRPLL 274


>gi|197335145|ref|YP_002156399.1| exodeoxyribonuclease III [Vibrio fischeri MJ11]
 gi|197316635|gb|ACH66082.1| exodeoxyribonuclease III [Vibrio fischeri MJ11]
          Length = 268

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 79/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+      + D++ LQE+  +N +   
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHNPDVIGLQEIKVHNEM--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q       ++       R
Sbjct: 42  -------FPVEAVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQYGFDTDTEEHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      +G K+ +++       F       +        Q  + L   +     +  
Sbjct: 91  MIMTTHQREDGSKVTIMN-----GYFPQGDNVKHETKFPYKRQFYKDLMTHLHTHHTNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ +T+        F     
Sbjct: 146 EIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSFQPEEREWLQTLKDWGFEDTFRNLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +          +          D      ++ S
Sbjct: 206 EVTDQFSWFDYRSKGFVDNRGLRIDVIMATPTLAVKCTESGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|24374562|ref|NP_718605.1| exonuclease III [Shewanella oneidensis MR-1]
 gi|24349161|gb|AAN56049.1|AE015740_3 exodeoxyribonuclease III [Shewanella oneidensis MR-1]
          Length = 270

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 84/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 S    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RSRLHQLQALIDSHQPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  Q       +D    A  R
Sbjct: 42  -------FPLAEVEAMGYHVHYHGGKAHYGVAMLSKVAPLKVQKGFATDEED----AQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + VL+       F       +        +  Q L   +     +  
Sbjct: 91  MIIGTFAQANGRPLTVLN-----GYFPQGESIDHPTKYPAKRKFYQDLMAHLHANHSNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +   +    L++        + D       + S
Sbjct: 206 DRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYELRGIDKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|83746623|ref|ZP_00943673.1| dioxygenase [Ralstonia solanacearum UW551]
 gi|207727912|ref|YP_002256306.1| endonuclease/exonuclease/phosphatase protein [Ralstonia
           solanacearum MolK2]
 gi|207742318|ref|YP_002258710.1| endonuclease/exonuclease/phosphatase protein [Ralstonia
           solanacearum IPO1609]
 gi|83726757|gb|EAP73885.1| dioxygenase [Ralstonia solanacearum UW551]
 gi|206591154|emb|CAQ56766.1| endonuclease/exonuclease/phosphatase protein [Ralstonia
           solanacearum MolK2]
 gi|206593706|emb|CAQ60633.1| endonuclease/exonuclease/phosphatase protein [Ralstonia
           solanacearum IPO1609]
          Length = 248

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 93/286 (32%), Gaps = 49/286 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----A 79
           +R+ ++NI+             +          +RQ    +DADIVFLQE+   N    A
Sbjct: 4   LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53

Query: 80  VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                P  T   + +T       + +    +  H   A+  +   +L ++  +     S 
Sbjct: 54  AELFDPSYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDI-----SD 108

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  +  + ++   ++ +L  H   F                  +QA+ L + +  
Sbjct: 109 HRFEQRGLLHAVTDLGFGEVHLLCAHFGLF-------------ARSRQRQAEALIERVRS 155

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
              + VP V+AGDFN   N L       + +   +   +    +        +    + +
Sbjct: 156 VVPTDVPLVVAGDFNDWNNRLD--RVICQALGATEVADKAAGAR--PLRTFPSHLPWLRL 211

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +              +I            + SDH P+  +  
Sbjct: 212 DRIYVRG-----------FDIERAHALTGRDWAQRSDHVPLLAELS 246


>gi|260575902|ref|ZP_05843897.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2]
 gi|259021828|gb|EEW25129.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2]
          Length = 353

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/349 (10%), Positives = 87/349 (24%), Gaps = 62/349 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSE----QEGVSLWKNSVKRTT----SDYTLLRQYAKNLDAD 67
             A   Q++R+ ++N+   +        +        R         T +      +DAD
Sbjct: 3   TAAPAPQRLRIATYNVEWFNGLFDNHGHLLEDAEPSARYQVTRGEQLTAIAIVMTAMDAD 62

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            V + E    N              +   R         +        +        +  
Sbjct: 63  AVMVIEAPDTNGKRSSVKALERFAAHYGLRTSRAVTGFPSETEQEITLLYDPARLTPRHD 122

Query: 128 YPLLGAKDSFSRAGNRR-----------------------AVELLVEINGKKIWVLDIHL 164
                   +      R                            +   NG+ + ++ +H+
Sbjct: 123 PMGEPPGHNPVTDEPRFDGVFRYDLDTDATPETIRFSKPPLELAVTLANGRALRLIGVHI 182

Query: 165 KSFCFLDSLENT--YSPSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLG 219
           KS     +         +     +Q      L+  +     +    ++ GDFN       
Sbjct: 183 KSKSPYGARGEAAITRLAIENRRKQLAQCVWLRRRVEGHLGAGESLIVLGDFNDGPGLDE 242

Query: 220 NNDDF----------------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPID 258
               F                 +  DP+  +    +   +   A           +  +D
Sbjct: 243 YERLFGHSGIEVVLGHDADPALQLYDPHARMALTQRMGMAATTARFYLAPQKRYFEALLD 302

Query: 259 YFVMDQNA----YKFLIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDY 302
           + ++  +       + I    ++       +++      SDH P+++D 
Sbjct: 303 FIMVSPDLVAAGPDWRIWHPLNDPGCLKVPELREALLAASDHFPVTLDL 351


>gi|254486528|ref|ZP_05099733.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101]
 gi|214043397|gb|EEB84035.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101]
          Length = 242

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 86/289 (29%), Gaps = 63/289 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+    +R+ S+NI            K        D   +      +DAD++ LQE    
Sbjct: 10  AAERHTIRVASYNIR-----------KAVGLDWRRDPHRIADVLAEVDADVIALQEADKR 58

Query: 78  -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A A V P            +    +  S+     AI VR      + +   L      
Sbjct: 59  LGARAGVLPLQRLEAELGYRMVEVSMRPHSHGWQGNAILVRSHLRDYVAERISLPTM--- 115

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R AV + ++    +I  L + L                     +Q   L+  + 
Sbjct: 116 ----EPRGAVSVRLQEPELEIIGLHLGLTPGM---------------RRKQMLNLQKLMA 156

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-LRNKI 255
           +++    P ++AGDFN                     +   P         + +  R   
Sbjct: 157 ERE---HPVLLAGDFNEW---------------NTGRMPFAPPSTVVTPGPSFHARRPSA 198

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +D FV+        +     +   +        KR SDH PI +D  F
Sbjct: 199 QLDRFVLGPGL--RSVSSHVHQSPLS--------KRASDHLPIVVDIAF 237


>gi|152002409|gb|ABS19574.1| beta-hemolysin [Staphylococcus aureus]
          Length = 330

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 92/298 (30%), Gaps = 32/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS N+  LS      L+ N  +   +D      Y K  + D+V   E     A  K
Sbjct: 42  DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 95

Query: 83  VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T                  S       +A+  K     +  +      
Sbjct: 96  LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 155

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK + V+  H +S    DS          + ++Q + + D+
Sbjct: 156 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 210

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248
           + +          I GD N          D  K ++ ND L                  N
Sbjct: 211 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 269

Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
                   +DY   D++  +   L+ E  +E     D        +    SDH PI  
Sbjct: 270 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 327


>gi|57650692|ref|YP_186826.1| phospholipase C [Staphylococcus aureus subsp. aureus COL]
 gi|282894608|ref|ZP_06302836.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8117]
 gi|130085|sp|P09978|PHLC_STAAU RecName: Full=Phospholipase C; AltName: Full=Beta-hemolysin;
           AltName: Full=Beta-toxin; AltName:
           Full=Sphingomyelinase; Short=SMase; Flags: Precursor
 gi|61213889|sp|Q5HEI1|PHLC_STAAC RecName: Full=Phospholipase C; AltName: Full=Beta-hemolysin;
           AltName: Full=Beta-toxin; AltName:
           Full=Sphingomyelinase; Short=SMase; Flags: Precursor
 gi|110815915|sp|Q2FWP1|PHLC_STAA8 RecName: Full=Phospholipase C; AltName: Full=Beta-hemolysin;
           AltName: Full=Beta-toxin; AltName:
           Full=Sphingomyelinase; Short=SMase; Flags: Precursor
 gi|46588|emb|CAA31769.1| unnamed protein product [Staphylococcus aureus subsp. aureus COL]
 gi|57284878|gb|AAW36972.1| phospholipase C [Staphylococcus aureus subsp. aureus COL]
 gi|269941409|emb|CBI49806.1| phospholipase C precursor (pseudogene) [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282763095|gb|EFC03227.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8117]
 gi|298695279|gb|ADI98501.1| beta-hemolysin [Staphylococcus aureus subsp. aureus ED133]
 gi|329731457|gb|EGG67820.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 330

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 92/298 (30%), Gaps = 32/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS N+  LS      L+ N  +   +D      Y K  + D+V   E     A  K
Sbjct: 42  DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 95

Query: 83  VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T                  S       +A+  K     +  +      
Sbjct: 96  LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 155

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK + V+  H +S    DS          + ++Q + + D+
Sbjct: 156 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 210

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248
           + +          I GD N          D  K ++ ND L                  N
Sbjct: 211 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 269

Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
                   +DY   D++  +   L+ E  +E     D        +    SDH PI  
Sbjct: 270 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 327


>gi|313667795|ref|YP_004048079.1| exodeoxyribonuclease III [Neisseria lactamica ST-640]
 gi|313005257|emb|CBN86690.1| exodeoxyribonuclease III [Neisseria lactamica 020-06]
          Length = 256

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   D++ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDVLVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  +          +     +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSR-----SAPEDVYIGLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++     + L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDV-------RVDLDTRALERPSDHAPVT 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|239999627|ref|ZP_04719551.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02]
 gi|240017251|ref|ZP_04723791.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA6140]
 gi|240081112|ref|ZP_04725655.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA19]
 gi|240118615|ref|ZP_04732677.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID1]
 gi|240124158|ref|ZP_04737114.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID332]
 gi|240126225|ref|ZP_04739111.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679]
 gi|240128828|ref|ZP_04741489.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae
           SK-93-1035]
 gi|254494342|ref|ZP_05107513.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 1291]
 gi|268595439|ref|ZP_06129606.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02]
 gi|268597223|ref|ZP_06131390.1| exodeoxyribonuclease III [Neisseria gonorrhoeae FA19]
 gi|268604327|ref|ZP_06138494.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID1]
 gi|268682783|ref|ZP_06149645.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID332]
 gi|268684808|ref|ZP_06151670.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679]
 gi|268687210|ref|ZP_06154072.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-93-1035]
 gi|293398467|ref|ZP_06642645.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62]
 gi|226513382|gb|EEH62727.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 1291]
 gi|268548828|gb|EEZ44246.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02]
 gi|268551011|gb|EEZ46030.1| exodeoxyribonuclease III [Neisseria gonorrhoeae FA19]
 gi|268588458|gb|EEZ53134.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID1]
 gi|268623067|gb|EEZ55467.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID332]
 gi|268625092|gb|EEZ57492.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679]
 gi|268627494|gb|EEZ59894.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-93-1035]
 gi|291610938|gb|EFF40035.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62]
 gi|317164881|gb|ADV08422.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 256

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++V              S      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRSVPQDVHF-----GLPSLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RIDLETRALERPSDHAPVA 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|156977170|ref|YP_001448076.1| hypothetical protein VIBHAR_05956 [Vibrio harveyi ATCC BAA-1116]
 gi|156528764|gb|ABU73849.1| hypothetical protein VIBHAR_05956 [Vibrio harveyi ATCC BAA-1116]
          Length = 317

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 93/309 (30%), Gaps = 30/309 (9%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +   + N+       G         S+       T  +     L+ DI+ LQE+ S    
Sbjct: 7   ITFATANLLNFVAPPGAYYDFENIYSLDDWQDKLTWTKSQFDQLNPDIIGLQEVFSIEET 66

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
              F +  +  + +     +       +    A+A R         ++    L    D  
Sbjct: 67  QTFFAEIGYQ-YSACVDTPHIEGDYIYSRPVVAVASRFPIESFEAVTFDKDTLNAFGDID 125

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLLSQQAQ 189
           +   +R+ V   +       I V   HLKS    D       S       S      +A 
Sbjct: 126 APPFSRKPVRATIIHPIIGHICVYVTHLKSQRPADSETPEQASRPIARWLSTQQRGWEAA 185

Query: 190 WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDP--------NDSLIRFPKE 240
            L+D + +   +   P ++ GD N+ I     N+   +            +   ++    
Sbjct: 186 MLRDAMQKHYANNPMPTLLMGDMNQAITKTSVNNVLVEQYGDSVTDLQLCDGWELQVAPS 245

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSD 294
            +SR   + +      +DY ++ Q               Y   D         R K  SD
Sbjct: 246 LESRPATHYDFAKGNVLDYILLSQEFDAHADVSIAEVTNYQVLDTHLINPSFERDKNASD 305

Query: 295 HCPISIDYD 303
           H  +++  +
Sbjct: 306 HAFVALTVE 314


>gi|241661977|ref|YP_002980337.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D]
 gi|240864004|gb|ACS61665.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D]
          Length = 248

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 90/285 (31%), Gaps = 49/285 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80
           +R+ ++NI+             +          +RQ    +DADIVFLQE+   N     
Sbjct: 4   LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53

Query: 81  AKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           A++F  N      +         + +       H   A+  +   +L ++  +     S 
Sbjct: 54  AELFDPNYTQLRYLATDVYPHTVYGRNAVYEHGHHGNAILSRFPILLSENLDI-----SD 108

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  +  + ++   ++ +L  H   F                  +QA+ L D +  
Sbjct: 109 HRFEQRGLLHAVTDLGFGEVHLLCAHFGLF-------------ARSRQRQAEALVDRVRS 155

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P V+AGDFN   N L       + +   +   +    +        +    + +
Sbjct: 156 VVPPDAPLVVAGDFNDWNNRLD--RMICQALGATEVADKAADAR--PVRTFPSQMPWLRL 211

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +              +I            + SDH P+  + 
Sbjct: 212 DRIYVRG-----------FDIERAHALTGREWAQRSDHVPLLAEL 245


>gi|54293632|ref|YP_126047.1| hypothetical protein lpl0685 [Legionella pneumophila str. Lens]
 gi|53753464|emb|CAH14919.1| hypothetical protein lpl0685 [Legionella pneumophila str. Lens]
          Length = 256

 Score = 96.9 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 76/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +L SWN+N+L                      + Q+ ++   D++ +QE          
Sbjct: 2   FKLASWNVNSL----------------KVRLEQVLQWLESSQVDVLAMQET--------- 36

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      +     +    S    +  +A+  +           +           R
Sbjct: 37  -KLTDENFPVVSFTDKGYHVIFSGQKTYNGVAIISRYPMT------DIQTDIPELEDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V    K I ++++++ +   L S +  Y             +  +I  +     
Sbjct: 90  RILAATV----KGIRLINLYVPNGGELTSDKYQYKLD------WLNKVTRFIQHEISIYS 139

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              + GDFN                           F K ++    L    +       A
Sbjct: 140 KVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPPERQAFMKILELG--LHDSFRNFAQEEKA 197

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++         Q          D    + +R SDH P+
Sbjct: 198 FSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQS-------KIDKEPRKAERPSDHAPV 250

Query: 299 SIDYD 303
            ++ +
Sbjct: 251 WVELE 255


>gi|114330240|ref|YP_746462.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91]
 gi|114307254|gb|ABI58497.1| Exodeoxyribonuclease III [Nitrosomonas eutropha C91]
          Length = 254

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 81/303 (26%), Gaps = 74/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  +      D++ LQE    +     
Sbjct: 1   MKIATWNVNSL----------------KVRLQQVIDWLNVNQPDVLCLQETKLQDEF--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    +    +  +A+  K   V         A   F     R
Sbjct: 42  -------FPVDELAQAGYQSIYAGQKTYNGVALLSKVTGVDV-----CAALPDFDDPQKR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + ++ +++ +   +DS +  Y        +    L  ++ Q++    
Sbjct: 90  L-----IAATYGDLRIICVYVPNGERVDSEKYAYK------LRWLSILNSFLQQERTRYG 138

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GDFN         D                 ++ +     +  F    +      
Sbjct: 139 KVALLGDFNIAPEDRDVYDPEAWKGQVLCSEAERQAFRGLLDTGFVDSF-HLFEQPEKIY 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++                 +  D    + +R SDH P+ 
Sbjct: 198 TWWDYRMMAFRRNRGLRIDHILLSHETADSCA-------TWQVDKAPRKLERPSDHAPVW 250

Query: 300 IDY 302
           ++ 
Sbjct: 251 VEL 253


>gi|72160662|ref|YP_288319.1| exodeoxyribonuclease III [Thermobifida fusca YX]
 gi|71914394|gb|AAZ54296.1| Exodeoxyribonuclease III [Thermobifida fusca YX]
          Length = 264

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 82/302 (27%), Gaps = 64/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  + +  D D+V LQE    +     
Sbjct: 1   MRLATWNVN----------------SVRARSERIAAWLRRSDVDVVALQETKCRDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +            +A+  +      Q    +G           
Sbjct: 41  ------QFPTAVFTELGYEVAHHGLSQWNGVAIASRVGLSDVQ----IGFPGQPGWGEPE 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    +      + V  +++ +   +D    TY        ++A     W++  ++   
Sbjct: 91  EAEARAISAVCGGVRVWSLYVPNGREIDHPHYTYKLQWLARLREAGE--AWLS--EDPKA 146

Query: 204 PFVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              + GD+N                         D F   +D   + +  P         
Sbjct: 147 QIALCGDWNIAPYDEDVWDMAEFEGRTHVTKPERDAFHAVVDAGFTDVVRPHAPGPGVYT 206

Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +        R  + ID+ +      +              D  + +GK  SDH P+  
Sbjct: 207 YWDYKGLAFPKRKGMRIDFILASPALAERATDA-------KIDREERKGKGASDHAPVIA 259

Query: 301 DY 302
           D+
Sbjct: 260 DF 261


>gi|82751595|ref|YP_417336.1| beta-hemolysin [Staphylococcus aureus RF122]
 gi|82657126|emb|CAI81563.1| beta-hemolysin [Staphylococcus aureus RF122]
          Length = 330

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 56/298 (18%), Positives = 92/298 (30%), Gaps = 32/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS N+  LS      L+ N  +   +D      Y K  + D+V   E     A  K
Sbjct: 42  DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 95

Query: 83  VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T                  S       +A+  K     +  +      
Sbjct: 96  LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 155

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  +   +E NGK + V+  H +S    DS          + ++Q + + D+
Sbjct: 156 -GFDNDSNKGFIYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 210

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248
           + +          I GD N          D  K ++ ND L                  N
Sbjct: 211 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 269

Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
                   +DY   D++  +   L+ E  +E     D        +    SDH PI  
Sbjct: 270 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 327


>gi|213963771|ref|ZP_03392020.1| endonuclease/Exonuclease/phosphatase family protein [Capnocytophaga
           sputigena Capno]
 gi|213953547|gb|EEB64880.1| endonuclease/Exonuclease/phosphatase family protein [Capnocytophaga
           sputigena Capno]
          Length = 348

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 92/348 (26%), Gaps = 55/348 (15%)

Query: 1   MIRKYVL--ALVFFLVPCTASVAQKV---RLVSWNINTLSE--QEGVSLWKNSVKRTTSD 53
           M R   L  +LV   V    +  +K     +  +N+  L +   +      +        
Sbjct: 1   MKRIVTLTVSLVLLAVLNAEAQQKKFSVRTIAFYNVENLFDTINDPNKFDDDRTPEGADR 60

Query: 54  Y---------TLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
           +           + +              DIV L E+ +   V  +        +     
Sbjct: 61  WTSKVYNDHVQKIAKVISEIGNDVTHHAPDIVGLAEIENEAVVQDLINTEYLKRY---NY 117

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
            I H +      +  A+  +K   + +   ++PL   KD       R  + +  E++G+ 
Sbjct: 118 GIVHYESPDARGVDVALIYKKGVFKPISSFAHPLHLTKDDGKPLYTRDQLLVSGELDGEM 177

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           I  +  H  S    ++         + L++Q   +   +    +     +  GDFN    
Sbjct: 178 IHFIVNHWPSRLGGEAKSRPSREKAAALNKQI--IDSLLKT--DPNAKVIAMGDFNDDPI 233

Query: 217 YLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
             G  +          + P +                         D F    +  K   
Sbjct: 234 NSGFKNVLKTKDKKEDVKPGELFNPMEAMLKKGMGTLAYQDGWNLFDQFYFTYDLLKEDK 293

Query: 272 QE-------------------SFSEILYNEDDIKSRGKRLSDHCPISI 300
                                 +    +      +     SDH P+ +
Sbjct: 294 SSYRYWKTGIFNRPYLANPKGRYKGYPFRSMSNGNYTWGYSDHFPVYM 341


>gi|325922786|ref|ZP_08184516.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
 gi|325546728|gb|EGD17852.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
          Length = 305

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 91/290 (31%), Gaps = 36/290 (12%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            V    +V +++ LV+ N++   E               +    + +  K L  D++ LQ
Sbjct: 42  AVQSPGAVQREMTLVTLNLHHDRED------------WPARRAYIAKQLKQLAPDVIALQ 89

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+        V  +  W            S            A+  +   +      L  
Sbjct: 90  EVIERRG--SVENQAAWLARKLGYEYTFASVDPVGAAKRYGNALLSRRNVLAMHQRLLQP 147

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D       R A  L V+++G+ + V   HL         E   +   +  ++Q   L 
Sbjct: 148 LDDY------RVAAHLQVDVDGQPVNVYVTHLN--------ERADARGTATRTRQVADLL 193

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           D+I    +   P VIAGDFN   + L          D   S+ R      S  N +    
Sbjct: 194 DFIASNSDQ-APVVIAGDFNTAADALDLEALRKGYGDSYGSVHRNSDATVSTLNLHV-FD 251

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ID+    QN           +  Y      + G+  SDH  + +  
Sbjct: 252 KPARIDHVFFQQNRLLAREARILFDAPY------AEGRWASDHYGVWVRL 295


>gi|21231641|ref|NP_637558.1| hypothetical protein XCC2202 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768237|ref|YP_242999.1| hypothetical protein XC_1916 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21113335|gb|AAM41482.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573569|gb|AAY48979.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 253

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 56/281 (19%), Positives = 89/281 (31%), Gaps = 36/281 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + LV+ N++   E               +    + +  K L  D++ LQE+        V
Sbjct: 1   MTLVTLNLHHDRED------------WPARRAYIAKELKQLAPDVIALQEVIERRG--SV 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  W            S            A+  K   + Q    L    D       R
Sbjct: 47  ENQAAWLASRLGYAYTFASVDPPGAPKRYGNALLSKRSVLAQHQRLLQPLDDY------R 100

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  L V+++G+ + V   HL         E + +   +  ++Q   L D+I     +  
Sbjct: 101 VAAHLQVDMDGQPVNVYVTHLN--------ERSDARGAATRTRQVADLLDFIASN-SNQA 151

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P VIAGDFN   + L          D   S+ R      S  N +        ID+    
Sbjct: 152 PVVIAGDFNTAADTLDLEALRKGYGDSYGSVHRNSDATVSTLNLHV-FDKPARIDHVFFQ 210

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           QN           +  Y E      G+  SDH  + +   F
Sbjct: 211 QNRLLAREARILFDTPYAE------GRWASDHYGVWVRLQF 245


>gi|261880007|ref|ZP_06006434.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270333323|gb|EFA44109.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 341

 Score = 96.9 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 86/303 (28%), Gaps = 48/303 (15%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           MI K +      L      +AQK + L+++NI      +             +    + +
Sbjct: 1   MIYKRLFLFPLLLCAMLTMMAQKNITLMTYNIKGGGMTD-------------TRLQNIAK 47

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             K    D+V +QE+ +      +F  +      +   +        +      +  R++
Sbjct: 48  VIKYNQPDVVAVQEVDNRML--GIFRHDYLKDLATATDMKYTFHPLVSKVYGIGLLFREE 105

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            + V  +++P            +R  +        K  + +  H            ++  
Sbjct: 106 PISVEPKTFPRGANSK---DREDRGIIIAEF----KDYYFIGTHYPLDDIDRDQITSWII 158

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           S +                  +  P  +AGDFN K NY              + +     
Sbjct: 159 SFAKR----------------AGTPVFVAGDFNAKPNYRAMRTFTNNGFKILNDV----- 197

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                     +      ID  +   +A +   +   S +  +           SDH P+ 
Sbjct: 198 ----NQYTYPSDNPTGCIDMILFYDSAEEEKYEVEDSGVAPSGGVNIKSQSETSDHLPVF 253

Query: 300 IDY 302
           +  
Sbjct: 254 VQL 256


>gi|162456399|ref|YP_001618766.1| exodeoxyribonuclease III [Sorangium cellulosum 'So ce 56']
 gi|161166981|emb|CAN98286.1| exodeoxyribonuclease III [Sorangium cellulosum 'So ce 56']
          Length = 269

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 83/304 (27%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ SWN+N                   +    L  +      D+V +QE  +   +   
Sbjct: 1   MRIASWNVN----------------SIRTRLEQLTSWLVRAAPDVVCMQETKVEDGSFPE 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +                     +  +A+  +          +    D   +  
Sbjct: 45  AALSEVGYRSVI------------FGQKSYNGVAIATRFGL---SVDDVKKGLDGDEQDV 89

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            RR +   +E     I V+++++ +   + +    Y  +        + L+  +  +   
Sbjct: 90  ARRMLAATIE----GIRVINVYVPNGQAVGTPAFAYKLA------WLERLRSELEARYRP 139

Query: 202 LVPFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-------CNA---- 247
               +I GDFN      +         + +   D      +  +         C+     
Sbjct: 140 DQQIMICGDFNVAPEAIDVAEPKKWEGQVLFHPDERAALGRLMEWGLVDAFRACHPAKEA 199

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID  ++ +         S        D      +R SDH P+
Sbjct: 200 YSWWDYRMGAFRRNKGLRIDLALVTRPLAARCTDVSI-------DTRPRELQRPSDHAPV 252

Query: 299 SIDY 302
            ++ 
Sbjct: 253 VVEI 256


>gi|91781292|ref|YP_556499.1| hypothetical protein Bxe_C1289 [Burkholderia xenovorans LB400]
 gi|91693952|gb|ABE37149.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 290

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 85/313 (27%), Gaps = 58/313 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RLV WNI      +G             +   + + A+ L D D++ +QE+        
Sbjct: 1   MRLVDWNIQWGCGVDG-----------RVELGRIVREARKLCDFDVMCVQEITRGFNEEP 49

Query: 75  --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                    S +  A++                  S   S        A+  +       
Sbjct: 50  AAGGLKGQPSSDQFAELAGLLPEMTVIDAIGSDLPSIGASPRRRQFGNAIVTRLPVRQVL 109

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            + L    D    +  R A+E +++ +   + V+  HL+ +   +            L +
Sbjct: 110 RHSLPWPADPAKPSMLRIALEAVLDADIGPLRVISTHLEFYS--EKQRLAQVARLRELHR 167

Query: 187 QAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           +A     +    ++   PF         +  GDFN   +            D       +
Sbjct: 168 EACDHARFPASAEKPDSPFAGTARPLGAIFCGDFNSAFDGAAYRRMLEPVADAPSFADAW 227

Query: 238 PKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                    A                  D+  + +N    +                   
Sbjct: 228 SCAHPGEPRAATVGLYDREQWPDGPFACDFIFVTENLTPRVAACEV-----------DPH 276

Query: 290 KRLSDHCPISIDY 302
            R SDH P+ ++ 
Sbjct: 277 SRASDHQPLWLEL 289


>gi|329956847|ref|ZP_08297415.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
 gi|328523604|gb|EGF50696.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
          Length = 370

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 95/354 (26%), Gaps = 63/354 (17%)

Query: 5   YVLALVFFLVPCTASV--------AQKVRLVSWNINTLSEQEGVSLWKNSV--------- 47
             ++L    +   AS             R++ +N+  L +    +L  +           
Sbjct: 22  LFISLSALTLLTFASSLYGQTKKDTLTFRVMGYNVENLFDCRHDTLKNDYEFLSDAVRHW 81

Query: 48  --KRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
              +       + +    +       +V L E+ + + +  +     + +    +     
Sbjct: 82  NYSKYKKKLDAVARVIIAVGEWSPPALVALCEVENDSVLRDL---TRYSVLREADYRYVI 138

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVL 160
           +       I+ A+  ++   ++L      +      +R   R  + +  + +N   + V 
Sbjct: 139 THSPDERGINVALLYQRGLFKLLSGQSYSVTKAHKSNR-PTRDILHVSGLLLNKDTLDVF 197

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
            +H  S          Y  S +   ++       +    +     ++ GDFN        
Sbjct: 198 VVHFPSRSGGAKASEPYRLSAAQRLKEVTDSLFRVRTHPQ----IIVMGDFNDYPCNKSV 253

Query: 221 NDDFWKTIDPNDSLIRFPKE----------KDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
                  + P ++     +            D    + K       +D+ ++  N     
Sbjct: 254 QKILRAGVPPIEADSSDTRALYHLLARKNIADKHFGSYKYQGEWGLLDHIILSGNLLITD 313

Query: 271 IQESFSEI---------------------LYNEDDIKSRGKRLSDHCPISIDYD 303
              S +E                       +            SDH P+  ++ 
Sbjct: 314 SPLSTAEAKAGIFSAPFLLTEDKKYGDSQPFRTYYGMKYQAGYSDHLPVWAEFT 367


>gi|300508421|pdb|3I41|A Chain A, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
           F277a, P278a Mutant
 gi|300508422|pdb|3I41|B Chain B, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
           F277a, P278a Mutant
 gi|300508423|pdb|3I46|A Chain A, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
           F277a, P278a Mutant With Bound Calcium Ions
 gi|300508424|pdb|3I46|B Chain B, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
           F277a, P278a Mutant With Bound Calcium Ions
 gi|300508425|pdb|3I48|A Chain A, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
           F277a, P278a Mutant With Bound Magnesium Ions
 gi|300508426|pdb|3I48|B Chain B, Crystal Structure Of Beta Toxin From Staphylococcus Aureus
           F277a, P278a Mutant With Bound Magnesium Ions
          Length = 317

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 53/298 (17%), Positives = 87/298 (29%), Gaps = 32/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS N+  LS      L+ N  +   +D      Y K  + D+V   E     A  K
Sbjct: 29  DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 82

Query: 83  VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T                  S       +A+  K     +  +      
Sbjct: 83  LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 142

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK + V+  H +S    DS          + ++Q + + D+
Sbjct: 143 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDF 197

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248
           + +          I GD N          D  K ++ ND L                  N
Sbjct: 198 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 256

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPISI 300
                   +DY   D++  +     +       +                SDH PI  
Sbjct: 257 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAAAYYYVYNDFSDHYPIKA 314


>gi|229515240|ref|ZP_04404700.1| exodeoxyribonuclease III [Vibrio cholerae TMA 21]
 gi|229520320|ref|ZP_04409746.1| exodeoxyribonuclease III [Vibrio cholerae TM 11079-80]
 gi|229342686|gb|EEO07678.1| exodeoxyribonuclease III [Vibrio cholerae TM 11079-80]
 gi|229347945|gb|EEO12904.1| exodeoxyribonuclease III [Vibrio cholerae TMA 21]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L+        D++ LQE  +       
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A+  K   V      + G         
Sbjct: 45  QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDNEEHQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    + NG+K  +L+       F       +        Q  + L  ++ + + +
Sbjct: 89  KRMIMATFADQNGQKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLCEHRSN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
               V+ GD N                        ++     ++ +T+     +  F + 
Sbjct: 144 SERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +      +   +          D       +
Sbjct: 204 HPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDK 256

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 257 PSDHAPIWATF 267


>gi|218705247|ref|YP_002412766.1| exonuclease III [Escherichia coli UMN026]
 gi|293405248|ref|ZP_06649240.1| exodeoxyribonuclease III [Escherichia coli FVEC1412]
 gi|298380891|ref|ZP_06990490.1| exodeoxyribonuclease III [Escherichia coli FVEC1302]
 gi|218432344|emb|CAR13234.1| exonuclease III [Escherichia coli UMN026]
 gi|291427456|gb|EFF00483.1| exodeoxyribonuclease III [Escherichia coli FVEC1412]
 gi|298278333|gb|EFI19847.1| exodeoxyribonuclease III [Escherichia coli FVEC1302]
 gi|323186929|gb|EFZ72247.1| exodeoxyribonuclease III [Escherichia coli RN587/1]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSTLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKREN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|187932631|ref|YP_001886154.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720784|gb|ACD22005.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B str. Eklund 17B]
          Length = 258

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 90/291 (30%), Gaps = 46/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+           + +   R      L+       D DI+  QE          
Sbjct: 1   MKVMTFNLRCDF-------FMDFKNRWDERRNLVFDIVNKYDCDIIGTQEATEKMFNDIS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-----FS 138
              + + I  +       S           I + KK+     +++ L    D      + 
Sbjct: 54  NNIDAFNIIGNPRSKKLFS-------ERNDILISKKHKVNDYRTFWLRDNYDKIGRSKWY 106

Query: 139 RAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT- 196
               R     ++E+ N K+I + + HL                    + + + L ++I  
Sbjct: 107 SMFPRICTTAIIELENSKRIRICNSHLDFLLP------------QARAYELKKLSEFIKK 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE----KDSRCNANKNLR 252
           ++++  +P +I GDFN   N     +     I     +            +     KN  
Sbjct: 155 EQEKEDLPLIIMGDFNSNPNSKLIKNFTSGNIFNKRLVAVQDMNKELYTKATMGHFKNKE 214

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               IDY  + +          F  I          GK  SDH P+  + +
Sbjct: 215 KGSHIDYIFVSEE---------FEIIDVEIVKYNVNGKYPSDHYPLMAEIN 256


>gi|83944983|ref|ZP_00957349.1| exodeoxyribonuclease III [Oceanicaulis alexandrii HTCC2633]
 gi|83851765|gb|EAP89620.1| exodeoxyribonuclease III [Oceanicaulis alexandrii HTCC2633]
          Length = 269

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 82/306 (26%), Gaps = 66/306 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                        +  + K    D++ LQE+     +  
Sbjct: 3   PFTLATWNIN----------------SVRLRAPHVASFVKEAQPDVIALQEI---KCLPD 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP+  +        +               +A+  +          L    +       
Sbjct: 44  QFPRKEFE------EMGFPHLHIVGQKGLHGVAIASRTPIEPLDQDKLCPRGE------- 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             A    V +NG ++     +       D  +   +P  +   +  + LK +   + +  
Sbjct: 91  --ARFQRVRVNGVELQ----NYYIPAGGDEPDPEINPRFAHKLEFLERLKGYAADRAKEN 144

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            P V+ GDFN                   +     +     ++  + +    +  D    
Sbjct: 145 APLVLVGDFNIAPREHDVWSHKQLLKVVSHTPVEVEALNAWLEAGEYIDVARELIDEPEK 204

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+  +        +++      +   D     ++ SDH 
Sbjct: 205 LFTWWSYRSKDWRASNRGRRLDHIWVSPALKDAALKDG--RDSFRIWDNARDWEKPSDHA 262

Query: 297 PISIDY 302
           P+++  
Sbjct: 263 PVTLRL 268


>gi|107029003|ref|YP_626098.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|116689839|ref|YP_835462.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
 gi|105898167|gb|ABF81125.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|116647928|gb|ABK08569.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
          Length = 284

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 83/307 (27%), Gaps = 52/307 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+ WNI    + +GV            D        + L D D++ LQE+        
Sbjct: 1   MRLIDWNIQWGRDADGV-----------VDLPRTVAAIRRLGDFDVLCLQELTRGFDALS 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                +  A++                  + R          A+  +          L  
Sbjct: 50  GRPGPDQFAELAALLPGYTIVDAIGADLPAIRPGAPRRQFGNAIATRLPVGRVLRQSLPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D+ + +  R A+++ ++ +   + V+  HL+ +            +     ++A    
Sbjct: 110 PADAGAPSMPRVALDIELQASFGSLRVVTTHLEYYSARQ--RLAQVDALRDRHREACAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           D     +    PF         ++ GDFN   +            D    +  +      
Sbjct: 168 DRPAPAETPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRLLEPIADAPGFVDAWIARHPG 227

Query: 244 RCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                              +  D+  +       +I                   R SDH
Sbjct: 228 HTPPPTAGIYDTVQWSDGPLACDFVFVTDTLLPRVIGCEI-----------DGDVRASDH 276

Query: 296 CPISIDY 302
            P+ ++ 
Sbjct: 277 QPVLLEL 283


>gi|156973843|ref|YP_001444750.1| exonuclease III [Vibrio harveyi ATCC BAA-1116]
 gi|156525437|gb|ABU70523.1| hypothetical protein VIBHAR_01553 [Vibrio harveyi ATCC BAA-1116]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 82/309 (26%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQK----GFPTDNEEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+K+ VL+       F       +        Q  + L  ++     +  
Sbjct: 91  MIMATFEDENGEKVTVLN-----GYFPQGDNIAHETKYPYKRQFYKDLMTYLNDHHTNDE 145

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               ++ KT+        F     
Sbjct: 146 QLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFEDTFRNLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  ++  +  K  ++        + D      ++ S
Sbjct: 206 EVNDRFSWFDYRSRGFDDNRGLRIDVILVTPSLAKKCVES-------DIDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|152984142|ref|YP_001348052.1| exonuclease III [Pseudomonas aeruginosa PA7]
 gi|150959300|gb|ABR81325.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7]
          Length = 270

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 77/311 (24%), Gaps = 74/311 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE          
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIERHQPDVIGLQE---TKVADDQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +    + +         H  +A+  +   +        G       +  R
Sbjct: 42  FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHR----GFPSDGEESQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  +  G  + V++       F       +        +    L+  +    +   
Sbjct: 91  FIWGTFADAQGNPLTVMN-----GYFPQGENRDHPTKFPAKQRFYADLQLLLENSFKPEQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++L    ++  T+     +  F     
Sbjct: 146 ALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALNP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +  +                  D      ++
Sbjct: 206 EVTDRFSWFDYRSRGFEDTPKRGLRIDVILASRALQSRFRDAGI-------DYDLRGMEK 258

Query: 292 LSDHCPISIDY 302
            SDH PI ++ 
Sbjct: 259 PSDHAPIWLEL 269


>gi|17546312|ref|NP_519714.1| exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000]
 gi|17428609|emb|CAD15295.1| probable exodeoxyribonuclease III protein [Ralstonia solanacearum
           GMI1000]
          Length = 269

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 96/303 (31%), Gaps = 61/303 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L  +  +      +    +D T +         D++ LQE+         
Sbjct: 1   MRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELK-------- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P + +    +      ++   +    +  +A+  +   + +    +    D       +
Sbjct: 42  LPDDRYP--LAELEAAGYASLFTGQKTYNGVAILARKAAMPEGRDVVRNIPDFAD--EQQ 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R V    ++ G  + V+  +  +   LDS +  Y        +    L+DW+  +  +  
Sbjct: 98  RVVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQDWLQAEMAAHP 151

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GDFN   +                       ++ ++    +  F   +       
Sbjct: 152 RLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFEQED-KLF 210

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID+ ++  N  +              D +    ++ SDH P+ 
Sbjct: 211 SWWDYRLFAFRRNAGLRIDHILLSPNLARLCESCHI-------DRVPRGWEQPSDHTPVV 263

Query: 300 IDY 302
              
Sbjct: 264 AAL 266


>gi|312881205|ref|ZP_07741003.1| exonuclease III [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309371097|gb|EFP98551.1| exonuclease III [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPLEDVEAMGYKVYFHGQKAHYGVAMLCKKEPISVQK----GFPTDNDDHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  + + NG+K+ VL+       F       +        Q  + L  ++     +  
Sbjct: 91  MIMVTMEDDNGEKVTVLN-----GYFPQGDNIEHETKYPYKRQFYKDLMTYLNDHHTNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGLVDTFRQIHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +   +        + D      ++ S
Sbjct: 206 EVEDRFSWFDYRSRGFDDNRGLRIDVVLATPKLAEKCTES-------DIDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|227355788|ref|ZP_03840181.1| exodeoxyribonuclease III [Proteus mirabilis ATCC 29906]
 gi|227164107|gb|EEI49004.1| exodeoxyribonuclease III [Proteus mirabilis ATCC 29906]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 78/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP         T   + +         H  +A+  K   V  +                R
Sbjct: 42  FP-------LETVSALGYHVFYHGQKGHYGVALLTKAKPVAVRK-----GFPGDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E     + V++       F       +       ++    L+ ++T       
Sbjct: 90  RMIMADIETPAGLLTVMN-----GYFPQGESRDHETKFPAKAKFYADLQQYLTTSLTPSS 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                               ++  T+        +  +  
Sbjct: 145 PVLIMGDLNISPTDKDIGIGENNMKRWLKMGKCSFLPEEREWLATLMGWGLTDTYRAQHP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              N       +           ID  +  +      I           D      ++ S
Sbjct: 205 EVENQFSWFDYRSKGFDDNRGLRIDLLLASRCLADNCISTGI-------DYDIRAMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+  ++
Sbjct: 258 DHAPVWAEF 266


>gi|167763327|ref|ZP_02435454.1| hypothetical protein BACSTE_01701 [Bacteroides stercoris ATCC
           43183]
 gi|167698621|gb|EDS15200.1| hypothetical protein BACSTE_01701 [Bacteroides stercoris ATCC
           43183]
          Length = 372

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/349 (10%), Positives = 90/349 (25%), Gaps = 62/349 (17%)

Query: 8   ALVFFLVPCTASVAQ-------KVRLVSWNINTLSEQEGVSLWKNSV-----------KR 49
           AL+      +A +           R++ +N+  L +    +L  +              +
Sbjct: 28  ALMLLAFLTSAPLHGQEKKDTLTFRIMGYNVENLFDCRHDTLKNDRDFLPDAVRRWNYTK 87

Query: 50  TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
                  + +            +V L E+ + + +  +     + +          +   
Sbjct: 88  YKKKLNAIARVIIAAGKWTPPALVALCEVENDSVLRDL---TRYSVLREAGYRYVITHSP 144

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHL 164
               I+ A+  ++   ++L         K   +    R  + +  ++ N   + V  +H 
Sbjct: 145 DERGINVALLYQRGIFKLLSNR-SYPVMKPRRNNRPTRDILHVSGQLLNSDTLDVFVVHF 203

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
            S          Y  + +   +        I  + +     +I GDFN   +        
Sbjct: 204 PSRSGGAKASEPYRLAAAQRLKDTTDSLLRIRTRPQ----IIIMGDFNDYSDNKSIQKIL 259

Query: 225 WKT--------IDPNDSLIRFPKEKDSR--CNANKNLRNKIPIDYFVMDQNAY------- 267
                      +D         ++        + K       +D+ ++  N         
Sbjct: 260 KAGIPPTETDSLDSRTLYHLLARKGIDNKHFGSYKYQGEWGLLDHIILSGNLLMPGSPLY 319

Query: 268 -KFLIQESFS-------------EILYNEDDIKSRGKRLSDHCPISIDY 302
                   F              E  +            SDH P+  ++
Sbjct: 320 TAEEKAGVFRAPFLLTEDRKYGDEQPFRTYYGMKYQGGYSDHLPVWAEF 368


>gi|62179894|ref|YP_216311.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|62127527|gb|AAX65230.1| exonuclease III, may repair singlet oxygen induced lesions
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322714361|gb|EFZ05932.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 80/310 (25%), Gaps = 75/310 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE        ++
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKRQPDVIGLQE---TKVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCNN 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N                               +   + +     +  F +  
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLK-WGLVDTFRQAN 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +      +   +          D      ++ 
Sbjct: 204 PQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKP 256

Query: 293 SDHCPISIDY 302
           SDH P+   +
Sbjct: 257 SDHAPVWATF 266


>gi|282863431|ref|ZP_06272490.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
 gi|282561766|gb|EFB67309.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
          Length = 285

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 58/310 (18%)

Query: 9   LVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           L+       A  A+      +R+ ++NI+  +  +GV            D        + 
Sbjct: 16  LLATAFAPPAGAAERGHVVPLRVATYNIHAGAGMDGVF-----------DLDRQAAQLRA 64

Query: 64  LDADIVFLQEMGSYNAVA--------KVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAI 114
           L AD++ LQE+ ++            ++  +    + ++    ++         +   A+
Sbjct: 65  LGADVIGLQEVDAHWGARSEWRDLASELAERLHMNVSFAPVYSLDPVAVGEPRREFGVAV 124

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSL 173
             R + +         L  +D            E+L+ + G  + V   HL         
Sbjct: 125 LSRYRILDAENHEITRLSTQDPDPVPAPAPGFGEVLLRVRGLPVRVYVTHL--------- 175

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
              Y P  S+ + Q    +  + + +      ++ GDFN   +        WK +   D 
Sbjct: 176 --DYRPDPSVRTVQVAETRRIMARDRGHR---ILLGDFNATPD-APELAPLWKELTDADP 229

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                                  ID+  + +                   +        S
Sbjct: 230 ----------GAPTFPAADPVNRIDFVAVSK--AGRTGAGQVRVREAAVAETL-----AS 272

Query: 294 DHCPISIDYD 303
           DH P+  D +
Sbjct: 273 DHRPLVADLE 282


>gi|237815303|ref|ZP_04594301.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A]
 gi|237790140|gb|EEP64350.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A]
          Length = 284

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%)

Query: 13  LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            +PC A       +++ +WNIN                   +    L+ + +    DIV 
Sbjct: 12  CLPCPARAHNHYGMKIATWNIN----------------SVKARIDNLQHWLRESSPDIVC 55

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ S +                    + +            +A+  K           
Sbjct: 56  LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 105

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               D  +R      +E +   +   + V+ ++L +   +D+ +  Y  S        Q 
Sbjct: 106 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 154

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236
           L++W  ++     P V+AGD+N      +           +             N     
Sbjct: 155 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 214

Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +              +           ID+ ++   A    I  +  + +        
Sbjct: 215 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 267

Query: 288 RGKRLSDHCPISIDY 302
             ++ SDH P+++  
Sbjct: 268 AWEKPSDHVPVTVTL 282


>gi|89072737|ref|ZP_01159302.1| putative exodeoxyribonuclease III [Photobacterium sp. SKA34]
 gi|89051557|gb|EAR57011.1| putative exodeoxyribonuclease III [Photobacterium sp. SKA34]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 86/306 (28%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+   +    D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  Q     G       A  R
Sbjct: 42  -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQK----GFPTDDENAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + +GK I V++       F       +        +    L +++     +  
Sbjct: 91  MIMATFKQDSGKNITVMN-----GYFPQGDNIKHETKFPAKEKFYADLMNYLNTAHTNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ +T+        F +   
Sbjct: 146 ELIVMGDINISPMDLDIGIGPANAKRWLKTGKCSFQPIEREWLQTLLDWGFTDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID  +   +  +  I+        + D      ++ S
Sbjct: 206 TVDDKYSWFDYRSKGFVDNRGLRIDVILATPSLAERCIES-------DVDYELRGIEKPS 258

Query: 294 DHCPIS 299
           DH PI 
Sbjct: 259 DHAPIW 264


>gi|261378301|ref|ZP_05982874.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685]
 gi|269145396|gb|EEZ71814.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685]
          Length = 256

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 86/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   D++ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNSPDVLVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++V              S      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRSVPQDVHF-----GLPSLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +                    
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFQNLLDLGLTDSLRHIHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RVDLDTRALERPSDHAPVA 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|261854637|ref|YP_003261920.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2]
 gi|261835106|gb|ACX94873.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2]
          Length = 257

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 78/303 (25%), Gaps = 71/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +       I+ LQE+   N     
Sbjct: 1   MKIATWNVNSLN----------------VRKPQVLSWLAQQQPAILGLQELKQVNEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  I  S    + +    +    +  +A+  +                       R
Sbjct: 42  -------IDNSDFAAMGYQTLLNGQKTYNGVALIYQEELGEPSDVVCDIPA---LDDPQR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +         ++ V++ ++ +   +DS +  Y           +   +W+  +     
Sbjct: 92  RVIAATF----GELRVINAYVVNGEAIDSEKYQYK------LNWLEAFSNWLALEIAQHP 141

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN   +                     D++  +             +   N  
Sbjct: 142 NLVVMGDFNIAPSDADVFDPERFKDAVLCSPPERDYFNRLLAMGFTDALNCFSNEE-NNF 200

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +                     D      +R SDH P+ 
Sbjct: 201 TWWDYRGGGYRRNHGLRIDHILTSPAVQAKATACHV-------DKEPRGWERPSDHAPVV 253

Query: 300 IDY 302
           +  
Sbjct: 254 LTL 256


>gi|320354767|ref|YP_004196106.1| endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM
           2032]
 gi|320123269|gb|ADW18815.1| Endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM
           2032]
          Length = 259

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 80/285 (28%), Gaps = 33/285 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+NI      +G + W                  +    D++ LQE         V
Sbjct: 2   IRVMSFNIRYGLADDGDNHWNRRKHFALDR-------IRAFGPDLLGLQECRDDGQAEFV 54

Query: 84  FPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   F+   R        +        +A  +       L +S P      S+   
Sbjct: 55  RACLPEYHFWGVHRQGPGDTALEMAPLLFRRSAFTLLDSGCFWLSES-PDDPGSMSWGSN 113

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R    + +   G    +L  +        +++             A+ L+ W+ +   
Sbjct: 114 YPRTVSWVRLACRGTGKTLLYANTHFDYEPSAIDGD-----------ARCLRQWLDRHCR 162

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
             +P ++ GDFN                +      +      +S  +A      +  ID+
Sbjct: 163 E-MPCIVTGDFNADKRSDAYRLLTDGGNLLDALRQVAPQGGNESTFHAFGRPEEQAAIDW 221

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            ++            F       D         SDH PI+   D+
Sbjct: 222 ILVS---------SHFRVTEARIDRSCHGHLFPSDHYPITAVLDW 257


>gi|259416092|ref|ZP_05740012.1| endonuclease/exonuclease/phosphatase [Silicibacter sp. TrichCH4B]
 gi|259347531|gb|EEW59308.1| endonuclease/exonuclease/phosphatase [Silicibacter sp. TrichCH4B]
          Length = 333

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 48/330 (14%), Positives = 97/330 (29%), Gaps = 49/330 (14%)

Query: 24  VRLVSWNINTL----SEQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQEMG 75
           +RL ++NI        E + + L +    R      +    +    + +DAD + + E  
Sbjct: 1   MRLSTYNIEWFEALFDESDHLRLDEAPSARHEVSRRAQAEAIADVLRAIDADGITIIEGP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +           T    ++  R  +      ++     A       ++          A 
Sbjct: 61  NTGKRQSTVRALTRFAEWADLRTRDVVMGFANDTRQEIAFLFDSNVMQAEHAPISSPRAP 120

Query: 135 DSFSRAGNRRAVELLVE---------------INGKKIWVLDIHLKSFCFLDSLENTYSP 179
              +       V+   +                +G    ++  HLKS     +     + 
Sbjct: 121 RFDATFEIDLDVDAKADMVRFSKPPMELMVTPADGMPFRLIGAHLKSKAPHGARTPEEAR 180

Query: 180 SC-----SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226
           +           QA WL+  +    E+  P V+ GD N           F +        
Sbjct: 181 AISIANRRKQLAQAVWLRGRVEDHLEAGDPLVVMGDLNDGPGLDVYEALFGRSSVEIIMG 240

Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY----KFLIQESF 275
               DP+   +  P ++    +A           +  +DY ++         K+ I   F
Sbjct: 241 AELFDPHARHLLRPNQQGLPTSARFYNHLEGRYFQALLDYIMISPPLQAHQPKWRIWHPF 300

Query: 276 SE-ILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +   Y    +       SDH P+++D  F
Sbjct: 301 EDAACYGTPTLCQALLTASDHFPVTLDLAF 330


>gi|170764286|ref|ZP_02640401.2| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|170713790|gb|EDT25972.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens CPE str. F4969]
          Length = 262

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 94/292 (32%), Gaps = 45/292 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++++N+    + +  + W       +     + +  K+   DI+  QE   +     
Sbjct: 3   DLKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDM 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDS 136
               + +         +   +  +  D   AI   K    VL+         P +     
Sbjct: 56  DDLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKD 108

Query: 137 FSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           F+ +  R   +L ++  I+G KI + + HL         E        ++ ++ + +   
Sbjct: 109 FNSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVKKIYKI 163

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLR 252
                    P++I GDFN  +     N    +  +     + +   K             
Sbjct: 164 YKT------PYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGG 217

Query: 253 NKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               I DY +  +          +     N DD K  G   SDH P+  + +
Sbjct: 218 YDGRIIDYILYSKE---------YEIKSLNIDDRKINGGYPSDHYPVICELE 260


>gi|157961464|ref|YP_001501498.1| exonuclease III [Shewanella pealeana ATCC 700345]
 gi|157846464|gb|ABV86963.1| exodeoxyribonuclease III [Shewanella pealeana ATCC 700345]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 89/310 (28%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+    +   DI+ LQE        + 
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDSHQPDIIGLQE---TKVHDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP       ++    + +         H  +A+  K   +  Q       +D    A  R
Sbjct: 42  FP-------FADVEAMGYKVHYHGGKAHYGVAMLSKLEPIKVQKGFPTDEED----AQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + VL+       F      ++        +  + L  ++ +   S  
Sbjct: 91  MIMGTFTQENGRPLTVLN-----GYFPQGDNISHETKYPAKRKFYKDLMLYLNEYHSSDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGLVDTFRELHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +  +   + L +        + D       + S
Sbjct: 206 ERSERYSWFDYRSKGFVDNRGLRIDVVLATKTLAERLTES-------DVDYDLRGIDKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 259 DHAPIWSTFS 268


>gi|332976281|gb|EGK13142.1| hypothetical protein HMPREF9373_1351 [Psychrobacter sp. 1501(2011)]
          Length = 1300

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 97/327 (29%), Gaps = 58/327 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWK------------NSVKRTTSDYTLLRQYAKNLDADIVF 70
           +V + S N+       G S ++            ++++        L    + LDAD+V 
Sbjct: 595 EVTVASANVLNFFTTFGNSKFETPYGNEQSGRGADNLEEYNRQLDKLVSMIQGLDADVVG 654

Query: 71  LQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           L E+ +             +A+      +T+  +              N+ I   +  + 
Sbjct: 655 LMEIQNNGYGEDSAIKALVDAINARLGADTYD-YIKGPFNNGSESTAGNDAIMVGMIYKP 713

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENT 176
            NV  +  +      +      GNR  +    E N  G++  V+  H KS   +   +  
Sbjct: 714 ANVTPVGSAVVPDTDEYPAFANGNRVPLAQAFESNKDGEQFSVVVNHFKSKGSVIDPDQQ 773

Query: 177 YSPSCS--LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                +     + AQ LK W+            V+ GDFN             + ++ + 
Sbjct: 774 DGQGNNPITRLEAAQQLKQWMDTDPTGTGDTDNVLIGDFNSYTMEDS-----LQYLENSG 828

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--- 289
                  +      +         +D+ +  ++    +   +   I   E          
Sbjct: 829 Y------DIQKEGFSYVFDGLWGSLDHVITSESMSDQITGVATWGINAEEATAFDYNTNF 882

Query: 290 -------------KRLSDHCPISIDYD 303
                         R SDH P+ I  +
Sbjct: 883 KGNGQKGLYAPDAYRASDHNPVLIGLN 909


>gi|300692524|ref|YP_003753519.1| metal dependent endonuclease/phosphatase [Ralstonia solanacearum
           PSI07]
 gi|299079584|emb|CBJ52262.1| putative metal dependent endonuclease/phosphatase [Ralstonia
           solanacearum PSI07]
          Length = 248

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 92/286 (32%), Gaps = 49/286 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80
           +R+ ++NI+             +          +RQ    +DADIVFLQE+   N     
Sbjct: 4   LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53

Query: 81  AKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           A++F  N      +         + +    +  H   A+  +   +L ++  +     S 
Sbjct: 54  AELFDPNYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDI-----SD 108

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  +  + ++   ++ +L  H   F                  +QA+ L + +  
Sbjct: 109 HRFEQRGLLHAVADLGFGEVHLLCAHFGLF-------------ARSRQRQAEALIERVRS 155

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
              +  P ++AGDFN   N L       + +   +   R    +        +    + +
Sbjct: 156 VVPTDAPLLVAGDFNDWNNRLD--RVICQALGATEVADRSAGAR--PLRTFPSHLPWLRL 211

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +              +I            + SDH P+  D  
Sbjct: 212 DRIYVRG-----------FDIERAHALTGRDWAQRSDHVPLLADLS 246


>gi|237710201|ref|ZP_04540682.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 9_1_42FAA]
 gi|229455663|gb|EEO61384.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 9_1_42FAA]
          Length = 306

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/285 (10%), Positives = 84/285 (29%), Gaps = 26/285 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRT 50
           ++K +L L    +       +  R++ +N+  L + +  +L  +           +  R 
Sbjct: 1   MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +           D+V L E+ + + +  +   +          + +      
Sbjct: 61  HDKLARIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSPDE-- 118

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLK 165
              I  A+  ++   +++ ++   +  K+   R   R  + +  ++ +G  + V   H+ 
Sbjct: 119 -RGIDVALLYQRGTFKLVGKNCISVPYKEI-ERRPTRDILHVTGQVASGDTLDVFVCHMP 176

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
           S    +     Y     L + Q   +              +I GDFN             
Sbjct: 177 SRAGGEEKSEPYR----LFTAQILKIAADSVMNIRQHPNVMIMGDFNDYPTNNSIAKVLG 232

Query: 226 KTI--DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                    +   +      +    +       +D  ++     +
Sbjct: 233 AVAPKSGVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSGFLLQ 277


>gi|113868345|ref|YP_726834.1| metal-dependent hydrolase [Ralstonia eutropha H16]
 gi|113527121|emb|CAJ93466.1| Metal-dependent hydrolase [Ralstonia eutropha H16]
          Length = 284

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 89/308 (28%), Gaps = 57/308 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI      +G       + R       +       DAD++ LQE+       +  P
Sbjct: 3   LISWNIQWGRGADGHVD----LGRQVDTLRGIA------DADVICLQEVTRGFGELRGSP 52

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAKDSF 137
                   +      H       D  T           +  +        + L    D  
Sbjct: 53  GEDQVTELTALLPGYHLLYAPGVDRRTATGGRKQFGNLIATRLPVREVFRHALPWPADPQ 112

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             +  R A+E  VE++ +++ V+  HL+ +          + +      +A        +
Sbjct: 113 VASMPRVALEASVEVSTRRLRVICTHLEYYSSHQ--RAAQAEALRTWHAEACDHARRPGR 170

Query: 198 KKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            ++   PF         V+ GDFN K + +         ++P D      ++     +  
Sbjct: 171 SEKWPGPFTPEPRPAEAVLCGDFNSKPDDIAYRR----VLEPFDDATPPWRDAWLHTHPG 226

Query: 249 -------------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                        +        D+  + +N    + +                    SDH
Sbjct: 227 QPHAPTCALYDKEQWPEPPFACDFMFVTENLAGRIRRCEV-----------DADTASSDH 275

Query: 296 CPISIDYD 303
            PI +  D
Sbjct: 276 QPILLSLD 283


>gi|209964343|ref|YP_002297258.1| exodeoxyribonuclease III [Rhodospirillum centenum SW]
 gi|209957809|gb|ACI98445.1| exodeoxyribonuclease III [Rhodospirillum centenum SW]
          Length = 257

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 86/303 (28%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  +      D+V LQE+    A    
Sbjct: 1   MKIATWNVN----------------SVKARLPNVLSWLNAAAPDVVLLQEIKCETA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         +  +A+  +              +D  +R    
Sbjct: 41  ------SFPALEFEPLGYRVHAVGQKSYNGVAILSRLPVEDLIERLPGEPEDVQAR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +   I G  + +  ++L +   + S +  Y        +  + LK  + +     V
Sbjct: 91  ---YVEGTIGG--LRIASLYLPNGNPVGSEKYPYK------LRWMERLKAHVGELLAREV 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           PFV+ GD+N         D                 ++ I        F     +  +A 
Sbjct: 140 PFVLGGDYNVIPAPEDVYDPEGWSGDALFRRETREKFREILNLGLTEAFRALHPAARHAY 199

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+F++   A   L   +        D      ++ SDH P+ 
Sbjct: 200 TFWDYQAGAWPRDLGLRIDHFLLSPQAADRLAGCTI-------DRSPRGQEKASDHTPVL 252

Query: 300 IDY 302
           +D 
Sbjct: 253 LDL 255


>gi|209551444|ref|YP_002283361.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537200|gb|ACI57135.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 288

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 81/323 (25%), Gaps = 79/323 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +   S+NI      +G             D   + +      AD++ LQE+         
Sbjct: 1   MNFASYNIQYGFGLDG-----------RYDLARIARSL--EGADVIALQEVTRGFSRNGF 47

Query: 75  -GSYNAVAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYP 129
                 +A  FP   W    +           R             V  +   +  ++  
Sbjct: 48  ADMTADLAACFPDYFWVYGPACDIHVEAGEGGRQPVRGTRFQFGNMVLSRWPILSTRTLL 107

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L  ++        R A E ++ + G  I V  +HL                     +Q Q
Sbjct: 108 LPRSRTIGKINLQRGATEAVIAVPGGAIRVYSVHLDHVSPD------------ERIRQLQ 155

Query: 190 WLKDWITQKKESL-----------------VPFVIAGDFNRKINYLGN-------NDDFW 225
           +L   I    +                     +VI GDFN +                + 
Sbjct: 156 FLNAHINAFVQEGGSLTGAGEFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAGGGYYG 215

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
           +       +  F   +     +           ++ +DY  +       L          
Sbjct: 216 RVARIGTPVDAFAALEAYGPGSYSWMNPEDHGERMHLDYCFVSCGLVSRLQAARI----- 270

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
                       SDH P+ ++ +
Sbjct: 271 ------DTQSVGSDHFPLWVEIE 287


>gi|108759762|ref|YP_633331.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622]
 gi|108463642|gb|ABF88827.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622]
          Length = 256

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 86/303 (28%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    L  + K    D++ LQE+   +     
Sbjct: 1   MKIATWNVN----------------SVRARQERLLAWLKKAQPDVLCLQELKCVDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +         +  +A+  K            G  D    +  R
Sbjct: 41  ------DFPMEAVRELGYHAAVHGQKTYNGVAILAKEEPKDVVK----GLSDGVDDSHAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I V+  +  +   +DS +  Y             L+ ++  + +   
Sbjct: 91  LIAATV-----GGIRVVSAYAPNGQSVDSPQYQYKLEWYGR------LRRYLDTRHKPDE 139

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD+N     +   D               D  + +        F +         
Sbjct: 140 PLVLGGDWNVAPEDIDTYDPKLWEGQTLFTLKERDALQRLGAFGLSDAFRRLHPGVQK-F 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+  +     + L        + + D  + +GK+ SDH P+ 
Sbjct: 199 TWWDYRMLGFPKNLGLRIDHLYVTAPVAERLT-------VVDVDREERKGKQPSDHAPVW 251

Query: 300 IDY 302
           ++ 
Sbjct: 252 LEL 254


>gi|240113324|ref|ZP_04727814.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae MS11]
 gi|260439854|ref|ZP_05793670.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2]
 gi|268599400|ref|ZP_06133567.1| exodeoxyribonuclease III [Neisseria gonorrhoeae MS11]
 gi|291043128|ref|ZP_06568851.1| exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2]
 gi|268583531|gb|EEZ48207.1| exodeoxyribonuclease III [Neisseria gonorrhoeae MS11]
 gi|291012734|gb|EFE04717.1| exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2]
          Length = 256

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++V              S      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHF-----GLPSLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMSRHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RIDLETRALERPSDHAPVA 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|153825215|ref|ZP_01977882.1| exodeoxyribonuclease III [Vibrio cholerae MZO-2]
 gi|153830542|ref|ZP_01983209.1| exodeoxyribonuclease III [Vibrio cholerae 623-39]
 gi|229523879|ref|ZP_04413284.1| exodeoxyribonuclease III [Vibrio cholerae bv. albensis VL426]
 gi|229529117|ref|ZP_04418507.1| exodeoxyribonuclease III [Vibrio cholerae 12129(1)]
 gi|297579378|ref|ZP_06941306.1| exodeoxyribonuclease III [Vibrio cholerae RC385]
 gi|148873972|gb|EDL72107.1| exodeoxyribonuclease III [Vibrio cholerae 623-39]
 gi|149741194|gb|EDM55245.1| exodeoxyribonuclease III [Vibrio cholerae MZO-2]
 gi|229332891|gb|EEN98377.1| exodeoxyribonuclease III [Vibrio cholerae 12129(1)]
 gi|229337460|gb|EEO02477.1| exodeoxyribonuclease III [Vibrio cholerae bv. albensis VL426]
 gi|297536972|gb|EFH75805.1| exodeoxyribonuclease III [Vibrio cholerae RC385]
 gi|327484412|gb|AEA78819.1| Exodeoxyribonuclease III [Vibrio cholerae LMA3894-4]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L+        D++ LQE  +       
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A+  K   V      + G         
Sbjct: 45  QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDNEEHQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    + NG+K  +L+       F       +        Q  + L  ++ + + +
Sbjct: 89  KRMIMATFADQNGQKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
               V+ GD N                        ++     ++ +T+     +  F + 
Sbjct: 144 SERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +      +   +          D       +
Sbjct: 204 HPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDK 256

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 257 PSDHAPIWATF 267


>gi|296102796|ref|YP_003612942.1| exonuclease III [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295057255|gb|ADF61993.1| exonuclease III [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 80/310 (25%), Gaps = 75/310 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   V  +                R
Sbjct: 42  FP-------LEEVVKLGYNVFYHGQKGHYGVALLTKETPVSVRR-----GFPGDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       ++  Q L+D++T + +   
Sbjct: 90  RIIMAEIPSALGNITVIN-----GYFPQGESRDHETKFPAKAKFYQDLQDYLTTELKKEN 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N                               +   + +     +  F    
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLS-WGLVDTFRTAN 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +      +  I+          D      ++ 
Sbjct: 204 PDTQDRFSWFDYRSKGFDDNRGLRIDLLLASSPLAERCIETGI-------DYDIRSMEKP 256

Query: 293 SDHCPISIDY 302
           SDH P+   +
Sbjct: 257 SDHAPVWAKF 266


>gi|218709053|ref|YP_002416674.1| exonuclease III [Vibrio splendidus LGP32]
 gi|218322072|emb|CAV18146.1| Exodeoxyribonuclease III [Vibrio splendidus LGP32]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 80/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  Q       +D       R
Sbjct: 42  -------FPLADVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDNEDHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + +G+K+ VL+       F       +        Q  + L  ++        
Sbjct: 91  MIMATFEDEHGEKVTVLN-----GYFPQGDNIKHETKYPYKRQFYKDLMTYLNDYHNKDE 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               ++ KT+     +  F     
Sbjct: 146 QVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGFVDSFRLLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q       +          D      ++ S
Sbjct: 206 EVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLADKCTEAGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|220917946|ref|YP_002493250.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955800|gb|ACL66184.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 296

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 85/291 (29%), Gaps = 38/291 (13%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +  ++VR+VSWN++ L +               +     +    +      LDAD+V LQ
Sbjct: 34  TAGERVRIVSWNVHDLFDDVDRLEPPGALDTVATADEVEAKLARVTAVLARLDADLVLLQ 93

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ +      +  +  +      E                 +AV  +       S+    
Sbjct: 94  EVETAALAGALAARAGYAEARLVEGNDPRG---------IDVAVLSRLPLRAYVSHRDER 144

Query: 133 AKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              S      R  VE      +G  + ++  HL S    D          +  ++QA  L
Sbjct: 145 DA-SGRPLFPRDCVEAHAALPDGGTLALVGSHLSSALSDDG---------TRRAEQAARL 194

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           ++       +    V  GD N +             +     +                 
Sbjct: 195 REVADGLLRAGARVVAGGDLNDEAGST----ALAPLLGDGGWIDPAAALPPEARWTWSGG 250

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +  +D+  + +     ++Q +               +  SDH P+ +D 
Sbjct: 251 AARAALDHLAIPRADAGSVVQAAI--------AGGPDVQAASDHRPVVLDL 293


>gi|103487806|ref|YP_617367.1| endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis
           RB2256]
 gi|98977883|gb|ABF54034.1| Endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis
           RB2256]
          Length = 231

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 79/279 (28%), Gaps = 52/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+N+            K        D   +    + LDADIV LQE          
Sbjct: 2   IKVASYNMR-----------KGIGLDRRRDPGRVLAVLRELDADIVALQEADRRFGTRAS 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +S    ++              A+  +    +++S+ L            R
Sbjct: 51  AIPPHMFEEHSDYVPVDLLHGRPYAIGWHGNALLVRKGAEVEESHAL-----HLPTLEPR 105

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV   V I   ++ V+ +HL               S     QQA+ +   I   +   +
Sbjct: 106 GAVAATVRIGDTRLRVVGMHL-------------DISGLRRRQQARAILHHIA--EGEKL 150

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GD N            W+      +            ++  + R    +D     
Sbjct: 151 PTILMGDCNE-----------WRQTGGCLADFGAEHRLVDTGHSFHSRRPVAKLDRIFAS 199

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +     +               +   R SDH PI   +
Sbjct: 200 PDLDP--VDAGVH--------RSALAARASDHLPIWARF 228


>gi|21243041|ref|NP_642623.1| hypothetical protein XAC2306 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108551|gb|AAM37159.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 278

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 58/287 (20%), Positives = 94/287 (32%), Gaps = 36/287 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             A+ ++++ LV+ N++   E               +    + +  K L  D++ LQE+ 
Sbjct: 15  SPAAASREMTLVTLNLHHDRED------------WPARRAHIAKELKRLAPDVIALQEVI 62

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  V  +  W         I  S            AV  +   +  Q   L    D
Sbjct: 63  ERRG--SVENQAAWLARKLGYDYIFASVDPVGAPKRYGNAVLSRRRVLATQQRLLQPLDD 120

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A  L V+++G+ + V   HL         E   +    + ++Q   L D+I
Sbjct: 121 Y------RVAAHLQVDVDGQPVNVYVTHLN--------ERADARGTGIRTRQVADLLDFI 166

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                +  P VIAGDFN   + L          D   S+ R      S  N +   R   
Sbjct: 167 ASN-SAQAPVVIAGDFNTAADTLDLQALRKGYGDSYGSVHRNSDATVSTLNMHVFDR-PA 224

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+    QN           +  Y E      G+  SDH  + +  
Sbjct: 225 RIDHVFFQQNRLLAREARILFDTPYAE------GRWASDHYGVWVRL 265


>gi|238919557|ref|YP_002933072.1| exodeoxyribonuclease III, [Edwardsiella ictaluri 93-146]
 gi|238869126|gb|ACR68837.1| exodeoxyribonuclease III, putative [Edwardsiella ictaluri 93-146]
          Length = 269

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 78/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFISFNINGL----------------RARPHQLAAIVEKHSPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  +   +  +                R
Sbjct: 42  FP-------LQDLAHLGYQLHYHGQKGHYGVALLTRMAPLAVRK-----GFPGDDAEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       S+    L+ ++        
Sbjct: 90  RVIMADIPTELGTLTVIN-----GYFPQGESRDHPIKFPAKSKFYADLQRYLQDSLTPQN 144

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                        ++L    ++   +     +  + +   
Sbjct: 145 PVLIMGDMNISPRDIDIGIGDESRRRWLRSGKCSFLPEEREWLDRLLAWGLVDTYRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +              D      ++ S
Sbjct: 205 QGDDHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCTDTGI-------DYEIRAMEKPS 257

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 258 DHAPIWAEF 266


>gi|260563899|ref|ZP_05834385.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
 gi|260153915|gb|EEW89007.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
          Length = 279

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%)

Query: 13  LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            +PC A       +++ +WNIN                   +    L+ + +    DIV 
Sbjct: 7   CLPCPARAHNHYGMKIATWNING----------------VKARIDNLQHWLRESSPDIVC 50

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ S +                    + +            +A+  K           
Sbjct: 51  LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               D  +R      +E +   +   + V+ ++L +   +D+ +  Y  S        Q 
Sbjct: 101 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 149

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236
           L++W  ++     P V+AGD+N      +           +             N     
Sbjct: 150 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 209

Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +              +           ID+ ++   A    I  +  + +        
Sbjct: 210 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 262

Query: 288 RGKRLSDHCPISIDY 302
             ++ SDH P+++  
Sbjct: 263 AWEKPSDHVPVTVTL 277


>gi|115379792|ref|ZP_01466863.1| endonuclease/exonuclease/phosphatase [Stigmatella aurantiaca
           DW4/3-1]
 gi|310820726|ref|YP_003953084.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|115363210|gb|EAU62374.1| endonuclease/exonuclease/phosphatase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393798|gb|ADO71257.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 254

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 83/282 (29%), Gaps = 47/282 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+ LVS+NI++    +G             D   + +  +   AD++ LQE+G + +V  
Sbjct: 2   KLTLVSYNIHSGVGTDGRF-----------DLHRVGEVLRETHADVIALQEVGDFRSVTD 50

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +           +                A+  +   +  ++Y L            
Sbjct: 51  REDQPEHLADMLGLHMAFGPNV-VKAGRRYGNAILTRLPILQSKNYDLSVPG-----REP 104

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R A+   +++  GK + V  +HL                     Q+   L   I Q    
Sbjct: 105 RGALRCDLDLGAGKALHVFCLHLGLSIG------------ERRRQERLLLSADILQDAAR 152

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P V+ GDFN   N                       E D+      +    + +D   
Sbjct: 153 KDPVVVCGDFNYWGNKPVPALVRQAI-------HDVALELDAPARTYPSRLPMLRLDRIF 205

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D      +   S                  SDH P+ + ++
Sbjct: 206 VDTG----VRPISIH------PHRSELASVASDHLPLVMRFE 237


>gi|255953047|ref|XP_002567276.1| Pc21g02110 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588987|emb|CAP95108.1| Pc21g02110 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 449

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 96/318 (30%), Gaps = 30/318 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++  +L+++   +   A+   K   +S+N+  L      +    +    T +  LL  Y 
Sbjct: 1   MKTILLSVLLPALASAATTNGKFTALSFNVAGLPSILQSNDVNGTK---TENAKLLGTYF 57

Query: 62  KNLDADIVFLQEMG-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                DI+ +QE+     ++   +    +       R          + ++T        
Sbjct: 58  SEYGYDIINMQEVPLHPVSLDFNYHAYIYETDTHAYRTATSGGAAIGSGLNT--ISNYNW 115

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179
           V   +  +              +    +     +G  +   ++H  +    +      S 
Sbjct: 116 VDFARVKWNKCSDASGSDCLTPKGFTFMRWNPADGVYVDFYNLHADAGTEDEDETARNSN 175

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                    Q + D+I     +    V+ GD N +      +         N     + +
Sbjct: 176 --------LQQVADYIDTW-STGNAVVVMGDTNSRYTRAK-DTAIRVFKSQNTLADPWVE 225

Query: 240 EKDSRCNAN-----------KNLRNKIPIDYFVMDQNAYKFLIQESFSEIL--YNEDDIK 286
            +                   +++    +D  +   +    L  +SF      +   D K
Sbjct: 226 LEKDGVYPTAGADALVCENPSSVQTCETVDKVLYRGSNVVSLKADSFVYASEKFTNTDPK 285

Query: 287 SRGKRLSDHCPISIDYDF 304
             G  LSDH PI +++ +
Sbjct: 286 YLGDILSDHNPILVNFTW 303


>gi|114771793|ref|ZP_01449186.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255]
 gi|114547609|gb|EAU50500.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255]
          Length = 260

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 88/303 (29%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  +      DI  LQE+ S + +   
Sbjct: 1   MKIATFNING----------------IKARLPALLDWLSETMPDIAMLQEIKSVDEL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K             + D  +R    
Sbjct: 42  -------FPREEIEALGYQIHSHGMKGFNGVAILSKYPLEDIMRGLPGDSDDIQTRY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V  N   + + +++L +       +  Y        +  + L +      +   
Sbjct: 92  --IEATVITNKGPLRLCNLYLPNGNPTPGPKFDYK------LKWMKRLYERTCALIKLEE 143

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF++AGDFN                   YL  +   ++ I        F  +  S  N  
Sbjct: 144 PFLLAGDFNIIPQAEDCWDTKVWESDAAYLPESRAAYRKILNLGLTDAFRVKNKSAMNYT 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+F++  +    LI           D       + SDH P+ +
Sbjct: 204 FWDYQAGAWNKNNGIRIDHFLLSSSCADILIDC-------QSDRECRARDKPSDHVPVWV 256

Query: 301 DYD 303
           + D
Sbjct: 257 ELD 259


>gi|108759975|ref|YP_631081.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108463855|gb|ABF89040.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 715

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 84/307 (27%), Gaps = 23/307 (7%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIV 69
             +  +A  A       WN+             +S    + D      R       A++ 
Sbjct: 163 LTLSVSAPGAPVFTAGQWNLTYFGSDSRGPSNSSSDGGASDDLQIAGARDIMLAAGANLW 222

Query: 70  FLQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNN--DIHTAIAVRKKNVRVLQQ 126
            + EM        +      +  F S +                   +            
Sbjct: 223 AMVEMVDTADFDLLKAQLPGFDGFLSNDAAFVSGGTSPYGTSSQKLGVLYDSSLTFQSAT 282

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
              +    D   R   R      +      + V+ +H+++     +         S    
Sbjct: 283 LVRIGNISDFADRPPLRVDFTTEINGAETPLTVIVVHMRANSADPTAPREARERAS---- 338

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---------DFWKTIDPNDSLIRF 237
               LK ++ ++        + GD+N  ++   + D          +   +  +      
Sbjct: 339 --AALKAYLDEQLP-TQHVFVIGDWNDDVDESISLDPTSGAPLATPYQNFVSDSAHFTFI 395

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            +E  S    + ++  +  +D+ +    A    + ES   + Y ++        +SDH P
Sbjct: 396 TRE-LSLAGDDTSIGFENVVDHTLATNEAADRYVAESARVL-YVDEWFPDFLNVVSDHRP 453

Query: 298 ISIDYDF 304
           +   Y F
Sbjct: 454 VVSSYAF 460


>gi|307592282|ref|YP_003899873.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7822]
 gi|306985927|gb|ADN17807.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7822]
          Length = 798

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 96/328 (29%), Gaps = 47/328 (14%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             A V   +++  +N+       G      +          L      L+AD++ L+E+ 
Sbjct: 449 TPAEVGGDIKIGDFNLENYFTTLGSRGA-QTEFEFQRQQDKLVSAILGLNADVLGLEEVQ 507

Query: 76  SY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYP 129
           +      +A+A +           T   IN        D     +  +   V  +  +  
Sbjct: 508 NNGYGPNSAIASLVDALNTVAGAGTYAYINPGVAQLGTDQIAVGLLYKPSRVNPVGNAAI 567

Query: 130 LLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFL-----------DSLENT 176
           L      F+   NR A+    +  ++ ++  +   H KS               ++ +  
Sbjct: 568 L--DTGIFNPTINRPALAQTFKGLLDSEQFTIAVSHFKSKGGTASAAGSCTAAQNADQGD 625

Query: 177 YSPSCS-LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
              + +   + QA  L  W+            +I GD N              TI+    
Sbjct: 626 GQGAFNCTRTLQAIQLSQWLATNPTNSKTNYQIILGDLNSYAKEDPI-----TTIESAGY 680

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----- 288
           +    +   +   + +       +DY     +   F+   +   I  +E D+        
Sbjct: 681 INLDKQFGGNNTYSYQFQGQFGTLDYGFSSASLLPFVTGATPWHINSDEPDVLGYSTAFK 740

Query: 289 ------------GKRLSDHCPISIDYDF 304
                           SDH P+ I  +F
Sbjct: 741 SPSQIDSIYSPDAFASSDHDPLLIGLNF 768


>gi|241204407|ref|YP_002975503.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858297|gb|ACS55964.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 263

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 94/305 (30%), Gaps = 68/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+ D DIV LQE+ +   V + 
Sbjct: 1   MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  KN              D  +    R
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKNSPFEVNRGLPGDPLDEQA----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                    + + + V  ++L +   +++ +  Y  +        + L+ +  ++     
Sbjct: 91  FLEAAFTLSDTRILRVCCLYLPNGNPVETEKYPYKLA------WMERLRTFAAERLAYEE 144

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+AGD+N                   +L    + ++ ++         +         
Sbjct: 145 MLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREAFRRLENLGLTDAL-RATTDATQLY 203

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   +   +  + +          ++ SDH P+ 
Sbjct: 204 SFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPVI 256

Query: 300 IDYDF 304
             +DF
Sbjct: 257 AYFDF 261


>gi|153213065|ref|ZP_01948603.1| exodeoxyribonuclease III [Vibrio cholerae 1587]
 gi|124116112|gb|EAY34932.1| exodeoxyribonuclease III [Vibrio cholerae 1587]
          Length = 268

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 84/311 (27%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L+        D++ LQE  +       
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A+  K   V      + G     +   
Sbjct: 45  QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDNAEHQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    + NG+K  +L+       F       +        Q  + L  ++ + + +
Sbjct: 89  KRMIMATFADQNGQKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
               V+ GD N                        ++     ++ +T+     +  F + 
Sbjct: 144 SERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +      +   +          D       +
Sbjct: 204 HPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDK 256

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 257 PSDHAPIWATF 267


>gi|332288253|ref|YP_004419105.1| exonuclease III [Gallibacterium anatis UMN179]
 gi|330431149|gb|AEC16208.1| exonuclease III [Gallibacterium anatis UMN179]
          Length = 267

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 88/311 (28%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L Q       D++ LQE  +       
Sbjct: 1   MKFISFNINGL----------------RARPHQLHQLIAQYQPDVLGLQEIKVADEAFPH 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +FY                 H  +A+  K   +  +      A+D+     
Sbjct: 45  EIVADLGYHVFYH------------GQKSHYGVALLTKQQPLAVRKGFPTDAEDA----- 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            RR +   +     ++ V++       F      ++        +  + L+ ++ ++  +
Sbjct: 88  QRRIIMADLATPFGQLTVIN-----GYFPQGENRSHETKFPAKEKFYRDLQHYLVKEHNA 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P ++ GD N                          L    ++ + +     +  F   
Sbjct: 143 ANPVLVMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWLQNLYQYGLVDTFRAL 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  + +Q   +  I                  ++
Sbjct: 203 HPQVNDQFSWFDYRSKGFDDNRGLRIDLILANQALAQRCISAGI-------AKDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|330831230|ref|YP_004394182.1| putative phospholipase C [Aeromonas veronii B565]
 gi|328806366|gb|AEB51565.1| Putative phospholipase C [Aeromonas veronii B565]
          Length = 438

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 91/298 (30%), Gaps = 42/298 (14%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76
               ++++ S+N+  L                    TLL  Y K  DA  + LQE+    
Sbjct: 169 PAENRLKVASYNVWALPVIASSIG---------ERLTLLPDYLKGYDA--LLLQEVFDGR 217

Query: 77  -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               +  +  +  +      +         + +D    I  R   VR  Q  YP     D
Sbjct: 218 REGFLQALAKEYPYQTKVLDKP------GINVHDGGVVIVSRYPIVREAQLVYPQCTGTD 271

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            F+       +   V   GK   +   H  SF   ++ +        +   Q + L   +
Sbjct: 272 CFADK---GVMYAEVIKGGKAWHLFATHTASFDTDEARKLR-----QIQFGQIRSLAASL 323

Query: 196 TQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252
                +    +  GDFN     +  +  +    ++ ++    +    ++  +   N    
Sbjct: 324 K--IPATDTVIYGGDFNVNKRKFADDYANMLANLNAHEPA--YGGYTEATFDPRINPYAG 379

Query: 253 -------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  N   +DY V+ +         +   I  + D        LSDH P+  +  
Sbjct: 380 GPLSGGANVEYLDYLVVSREYGNASHNLNTVWIPRSSDGSLWPASNLSDHFPVKGEIS 437


>gi|260566570|ref|ZP_05837040.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40]
 gi|261758076|ref|ZP_06001785.1| exodeoxyribonuclease III [Brucella sp. F5/99]
 gi|260156088|gb|EEW91168.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40]
 gi|261738060|gb|EEY26056.1| exodeoxyribonuclease III [Brucella sp. F5/99]
          Length = 279

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%)

Query: 13  LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            +PC A       +++ +WNIN                   +    L+ + +    DIV 
Sbjct: 7   CLPCPARAHNHYGMKIATWNING----------------VKARIDNLQHWLRESSPDIVC 50

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ S +                    + +            +A+  K           
Sbjct: 51  LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               D  +R      +E +   +   + V+ ++L +   +D+ +  Y  S        Q 
Sbjct: 101 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 149

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236
           L++W  ++     P V+AGD+N      +           +             N     
Sbjct: 150 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 209

Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +              +           ID+ ++   A    I  +  + +        
Sbjct: 210 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 262

Query: 288 RGKRLSDHCPISIDY 302
             ++ SDH P+++  
Sbjct: 263 AWEKPSDHVPVTVTL 277


>gi|194698716|gb|ACF83442.1| unknown [Zea mays]
          Length = 353

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/340 (13%), Positives = 89/340 (26%), Gaps = 48/340 (14%)

Query: 11  FFLVPCTASVAQK--------VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           F  +P   + +Q          RLVS+NI      +        ++  +  S    +   
Sbjct: 9   FAPLPTEQTESQTDGGAARYQFRLVSYNILAQVYVKSTLFPHSPSACLKWKSRSGAILTE 68

Query: 61  AKNLDADIVFLQEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            K+ DAD + +QE+  Y+    K    + +   Y                  +A  V+K+
Sbjct: 69  LKSFDADFMCIQELDEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSAELVQKE 128

Query: 120 NV-------------------------RVLQQSYPLLGAKDSFSRAGNR-----RAVELL 149
            +                            + + P    +   +    R       +   
Sbjct: 129 VILYNDLVEKYVPSDNVNSALENNSSAEEDKNAKPDNSKRGDPNDPRVRLKRDCVGLLAA 188

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            +++     +L +      +     +        L  +    +  I+ K       +IAG
Sbjct: 189 FKLSDPCDQILIVANTHIYWDPQWIDVKLAQAKYLLSRVSQFEQLISNKYNCKPSVIIAG 248

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           DFN        N      +   D         +          N        +DY  +  
Sbjct: 249 DFNSTPGDKVYNYLLSANLGSTDEAPIKLRSLYAANGGEPEYTNYTPGFTGTLDYIFLSD 308

Query: 265 NAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +                +        +  SDH PI  D+
Sbjct: 309 GSSIKPTSLLRLPRGDSEDVKGGLPNFRHPSDHLPIGADF 348


>gi|148559237|ref|YP_001258847.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840]
 gi|148370494|gb|ABQ60473.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840]
          Length = 279

 Score = 96.5 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 90/315 (28%), Gaps = 69/315 (21%)

Query: 13  LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            +PC A       +++ +WNIN                   +    L+ + +    DIV 
Sbjct: 7   CLPCPARAHNHYGMKIATWNING----------------VKARIDNLQHWLRESSPDIVC 50

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ S +                    + +            +A+  K           
Sbjct: 51  LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               D  +R      +E +   +   + V+ ++L +   +D+ +  Y  S        Q 
Sbjct: 101 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 149

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236
           L++W  ++     P V+AGD+N      +           +             N     
Sbjct: 150 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 209

Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +              +           ID+ ++   A       +  + +        
Sbjct: 210 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFTSANIEKHV-------R 262

Query: 288 RGKRLSDHCPISIDY 302
             ++ SDH P+++  
Sbjct: 263 AWEKPSDHVPVTVTL 277


>gi|265763356|ref|ZP_06091924.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255964|gb|EEZ27310.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 361

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 87/304 (28%), Gaps = 68/304 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ ++N+++   ++                  +  Y K    DI+  QE       
Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSC-----------KEIAAYMKEHRVDIICFQEFVGN--- 145

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F  ++    ++  +      +  ++     +A+  K      +      +++     
Sbjct: 146 -RYFTSDSIRNAFADWQYAVIP-QAPDSTPILQVALFSKYPVKDSRLITYPDSRNCS--- 200

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179
                +   + ++G+ + + + HL++     +                            
Sbjct: 201 -----MWCDLNVDGQTVRIFNNHLQTTEVSQNKRRLERELAKDELTGREEAVAKQLLEGL 255

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +    + QA+ L+  I     +  P ++ GDFN   +    +      +        F
Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPVLVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                      +  +  + IDY    +                  D         SDH P
Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLDLCSDHNP 354

Query: 298 ISID 301
           + ++
Sbjct: 355 VVME 358


>gi|237654298|ref|YP_002890612.1| endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T]
 gi|237625545|gb|ACR02235.1| Endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T]
          Length = 249

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 48/287 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----YN 78
            +R+ S+NI+    Q    +              LR   ++LDAD+VFLQE+      + 
Sbjct: 2   PLRICSYNIHKGFSQFNRRMV----------VHELRDRLRSLDADLVFLQEVQGLHLGHP 51

Query: 79  AVAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           A    +P      F +    + I +      +  H   A+  +++ +   +  +     S
Sbjct: 52  ARHPDWPALPQHEFLAEDAWQQIAYGGNAIYDHGHHGNAILSRHLILSTANQDV-----S 106

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R   R  +   V++    + V  + +       S             +Q + L + + 
Sbjct: 107 DHRFERRGLLHCEVQLPEFDVPVHCVCVHLGLMAGS-----------RRRQMEALAERME 155

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +      P +IAGDFN   N     D   + +        F   +     +  +      
Sbjct: 156 ELAPGNAPLIIAGDFNDWRNRAD--DLLGRRL---GLAEAFGSGRGRPARSYPSTLPFFR 210

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D   +            F               R+SDH  ++ D +
Sbjct: 211 LDRIYVRG----------FRVRQAQVHYGAP-WARISDHAALTADLE 246


>gi|90412875|ref|ZP_01220875.1| putative exodeoxyribonuclease III [Photobacterium profundum 3TCK]
 gi|90326234|gb|EAS42661.1| putative exodeoxyribonuclease III [Photobacterium profundum 3TCK]
          Length = 268

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 88/310 (28%), Gaps = 74/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+   +    D++ LQE+       +V
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEI---KVHDEV 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP        +    + +         H  +A+  K   +  Q       +D+      R
Sbjct: 42  FP-------LADVEAMGYKVYHHGQKAHYGVAMLCKQEPINVQKGFPTDDEDA-----QR 89

Query: 144 RAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +    E  +GKK+ VL+       F      ++        +    L +++     + 
Sbjct: 90  RMIMATFEQEDGKKVTVLN-----GYFPQGENLSHETKFPAKEKFYADLMNYLNTHHTNE 144

Query: 203 VPFVIAGDFNRKINYLG---------------------NNDDFWKTIDPNDSLIRFPKEK 241
              ++ GD N     L                         ++ KT+        F +  
Sbjct: 145 EEVIVMGDINISPIDLDIGIGPANAKRWLKTGKCSFQLIEREWLKTLMDWGFTDTFRQLH 204

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +   +     I           D      ++ 
Sbjct: 205 PDVDDQFSWFDYRSKGFVDNRGLRIDVVLATPSLAARCIDAGI-------DYELRGIEKP 257

Query: 293 SDHCPISIDY 302
           SDH PI   +
Sbjct: 258 SDHAPIWSTF 267


>gi|301163088|emb|CBW22637.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides fragilis 638R]
          Length = 361

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 88/304 (28%), Gaps = 68/304 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ ++N+++   ++                  L  Y K    DI+  QE     A 
Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSC-----------KELAAYMKEHRVDIICFQEF----AG 144

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F  ++    ++  +      +  ++     +A+  K      +      +++     
Sbjct: 145 NRYFTSDSIRNAFADWQYAVIP-QAPDSTPILQVALFSKYPVKDSRLITYPDSRNCS--- 200

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179
                +   + ++G+ + V + HL++     +                            
Sbjct: 201 -----MWCDLNVDGQTVRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGL 255

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +    + QA+ L+  I     +  P ++ GDFN   +    +      +        F
Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPILVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                      +  +  + IDY    +                  D         SDH P
Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLDLCSDHNP 354

Query: 298 ISID 301
           + ++
Sbjct: 355 VVME 358


>gi|189024059|ref|YP_001934827.1| Exodeoxyribonuclease III [Brucella abortus S19]
 gi|297248222|ref|ZP_06931940.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196]
 gi|189019631|gb|ACD72353.1| Exodeoxyribonuclease III [Brucella abortus S19]
 gi|297175391|gb|EFH34738.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196]
          Length = 296

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%)

Query: 13  LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            +PC A       +++ +WNIN                   +    L+ + +    DIV 
Sbjct: 24  CLPCPARAHNHYGMKIATWNIN----------------SVKARIDNLQHWLRESSPDIVC 67

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ S +                    + +            +A+  K           
Sbjct: 68  LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 117

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               D  +R      +E +   +   + V+ ++L +   +D+ +  Y  S        Q 
Sbjct: 118 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 166

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236
           L++W  ++     P V+AGD+N      +           +             N     
Sbjct: 167 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 226

Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +              +           ID+ ++   A    I  +  + +        
Sbjct: 227 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 279

Query: 288 RGKRLSDHCPISIDY 302
             ++ SDH P+++  
Sbjct: 280 AWEKPSDHVPVTVTL 294


>gi|116251798|ref|YP_767636.1| exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256446|emb|CAK07530.1| putative exodeoxyribonuclease III [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 263

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 97/304 (31%), Gaps = 66/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+ + DIV LQE+ +   V + 
Sbjct: 1   MKIATWNING----------------VKARIDNLTQWLKDSNPDIVCLQEIKT---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  K+              D  +    R
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKSSPFEVNRGLPGDPLDEQA----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                    + + + V  I+L +   +++ +  Y  +        + L+ +  ++     
Sbjct: 91  FLEAAFTLSDMRILRVCCIYLPNGNPVETEKYPYKLA------WMERLQTFAAERLAYEE 144

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++AGD+N                   +L    + ++ ++            D+    +
Sbjct: 145 MLILAGDYNVIPEPHDCFDPRVWENDALFLPQTREAFRRLENLGLTDAVRATTDATQFYS 204

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ ++   A   +   +  + +          ++ SDH P+  
Sbjct: 205 FWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPVIA 257

Query: 301 DYDF 304
            +DF
Sbjct: 258 YFDF 261


>gi|304411895|ref|ZP_07393506.1| exodeoxyribonuclease III [Shewanella baltica OS183]
 gi|307303337|ref|ZP_07583092.1| exodeoxyribonuclease III [Shewanella baltica BA175]
 gi|304349755|gb|EFM14162.1| exodeoxyribonuclease III [Shewanella baltica OS183]
 gi|306913697|gb|EFN44119.1| exodeoxyribonuclease III [Shewanella baltica BA175]
          Length = 270

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 80/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDSHQPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K      Q     G       A  R
Sbjct: 42  -------FPLADVEAMGYQVHYHGGKAHYGVAMLSKVAPEKLQK----GFPTDDEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + V +       F       +        +  Q L  ++     +  
Sbjct: 91  MIIGTFSQANGRPLTVFN-----GYFPQGESIDHPTKYPAKRKFYQDLMHYLQTNHSNDE 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                               ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +   +    L++        + D       + S
Sbjct: 206 ERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYDLRGIDKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|163735846|ref|ZP_02143275.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149]
 gi|161390932|gb|EDQ15272.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149]
          Length = 260

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 80/302 (26%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  + K    D+  LQE+ S +     
Sbjct: 1   MKIATFNING----------------IKARIDALPAWLKEAQPDVALLQEIKSVDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S    + ++           +A+  K               D  +R    
Sbjct: 42  -------FPRSVFEDMGYNLETHGQKSFNGVAILSKLPLEDVTRGLPGDESDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V  +   + V  ++L +       +  Y             L D + +      
Sbjct: 92  --IEATVMGDTAPVRVCGLYLPNGNPAPGPKYDYKLD------WMARLYDRVKELLADET 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
            FV+AGD+N      +           +             N  L    + + +      
Sbjct: 144 TFVMAGDYNIIPQAEDAAKPESWRDDALFRLESRTAFRKLINLGLTEAFRARTAGPGHYS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L+           D       + SDH P+ I
Sbjct: 204 FWDYQAGAWNRNNGIRIDHLLLSPQAADMLVDCQI-------DKDVRGRDKPSDHVPVWI 256

Query: 301 DY 302
           D 
Sbjct: 257 DL 258


>gi|119715318|ref|YP_922283.1| exodeoxyribonuclease III [Nocardioides sp. JS614]
 gi|119535979|gb|ABL80596.1| Exodeoxyribonuclease III [Nocardioides sp. JS614]
          Length = 262

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 26/296 (8%), Positives = 66/296 (22%), Gaps = 50/296 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L                 S    +  +    + D++ LQE  +       
Sbjct: 1   MRIATWNVNSL----------------RSRIDRVEAFLDRHEVDVLALQETKARED---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +         +    +  +    +AV  +                +       
Sbjct: 41  ------QLPLMGIEARGYEVAVAGANQWNGVAVISRVGLSDVAVGFPGQPGWAKDVQRAA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLEN--------TYSPSCSLLSQQAQWLKDWI 195
                 +      + +  +++ +    D                +      Q   L    
Sbjct: 95  ETESRAIGATCGGVRIWSLYVPNGRKPDDPHYVYKLDWLARLRDAAQAWRDQDVALVGDW 154

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                +         F R  +        ++    +  +                   + 
Sbjct: 155 N-IAPTDEDVFDMAQFARSTHVTPPERAAFQAFLEDGYVDVVRPHAPGPEVYTYWDYYRQ 213

Query: 256 P--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    ID+ +   +    +            D  +  G   SDH P+ +D  
Sbjct: 214 RYERNRGMRIDFVLGSPSLAARVTGAFI-------DREERAGTGASDHAPVVVDLS 262


>gi|124009034|ref|ZP_01693718.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
           ATCC 23134]
 gi|123985354|gb|EAY25269.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
           ATCC 23134]
          Length = 343

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 85/345 (24%), Gaps = 54/345 (15%)

Query: 1   MIRKYVLALV-FFLVPCTASVAQK---V-RLVSWNINTLSEQEGVSLWKN---------- 45
           M +  VL L+ +  V  +    ++   +  +  +N+  L +       ++          
Sbjct: 1   MKKTLVLILLVWGSVTVSQGQGKEKYHLGSIAFYNVENLFDTIDDPEKRDEEYTPEGRRN 60

Query: 46  -SVKRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100
            +  R       L +    L       I+ L E+ +   V  +        +       +
Sbjct: 61  WTTIRYHKKLQNLARVLSKLAGGDAPSIIGLCEVENKQVVEDLVKTGGLKKYNYKIVHYS 120

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
              R     I  A+  R +           L  K +  R   R  + +  + +G  I  +
Sbjct: 121 SPDR---RGIDVALIYRPEYFAPTFSKSYRLIDK-TNPRFITRDQLLVKGKFDGDDIHFI 176

Query: 161 DIHLKSFCFLDSLENTYSPSCSLL-SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
             H  S               + L    A  L D      +     VI GD N   N   
Sbjct: 177 VNHWPSRGGGQKRSEPRRIKAATLTRSIADSLLD-----ADKNAKIVIMGDLNDNPNDKS 231

Query: 220 NNDDF---WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA------YKFL 270
                    K     +              +          D  +M +            
Sbjct: 232 LTKVLKASGKKPKGKNLYNAMLPLYKKGIGSLAYRDQWYLFDQIIMSKGLVMAKKYTYKY 291

Query: 271 IQESFSEI---------------LYNEDDIKSRGKRLSDHCPISI 300
           + +S                          ++     SDH P+ I
Sbjct: 292 VPKSARVFAPKLLKQRGGKYEGYPLRTFGGRTYLGGYSDHFPVYI 336


>gi|78063133|ref|YP_373041.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
 gi|77971018|gb|ABB12397.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
          Length = 621

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 85/315 (26%), Gaps = 47/315 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY--------TLLRQYAKNLDADIVFLQEM 74
            VR+VS+N+      +G     ++  +  +            +    + L AD++ L E+
Sbjct: 295 DVRIVSFNVFNYFNGDGNGGGFDAPAKRGAKTPAAFARQEAKIVAALRALRADVIGLMEI 354

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            +         +          R I+    R   + I  A+    + V       P+  A
Sbjct: 355 ANNGYGDASAVQRLATQLGDGWRAIDPGTARLGRDAIAVALLYDSRTVE------PIGRA 408

Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLS 185
                   +R  +          +   V   HLKS    ++       S       +  +
Sbjct: 409 ATVALGGRHRPPLAQTFRRIGGTRAFTVAVNHLKSKNCPNATGADRDQSDGQGCWNAART 468

Query: 186 QQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A  + DW+            ++ GD N             + ++         +    
Sbjct: 469 RAATRVADWLGTSPAGTAADGVLLIGDLNSYAKEDPV-----RALESRGYANLVARFVGD 523

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIK 286
              +         +D+ +        +       I  +E                     
Sbjct: 524 AAYSYVFRGEAGSLDHALATPPLAARVKAVHVWHINADEPVALQPVPDYKTSAQRATYYA 583

Query: 287 SRGKRLSDHCPISID 301
               R SDH P+ ID
Sbjct: 584 PDAYRSSDHDPVVID 598


>gi|301099642|ref|XP_002898912.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262104618|gb|EEY62670.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 583

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 92/320 (28%), Gaps = 51/320 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V + ++N+  +  +       +  K T +    +         DI  L E   Y A   +
Sbjct: 65  VSVGTYNVWMMPRKVSAFTSCSPKKNTRARL--IGDLLPPC--DIWVLTECFDYRARDIL 120

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHT---AIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             K T   ++     + H + + +N        + +  K   +  +     GA     + 
Sbjct: 121 LDKMTEAGYFFFSPTVGHKRINKSNMRKLLNGGVLLASKYPILSVRVKLFEGACAGADKL 180

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            ++  +   +  +G  + V   HL+++            S ++   Q   + +++     
Sbjct: 181 ADKGVLYCKILKDGLLVHVFSTHLQAW--------NDPLSRTMRKLQMDMIANFMRAMDI 232

Query: 201 S--LVPFVIAGDFNRKINYLG---NNDDFWKTIDPNDS---------------------- 233
                  +  GD N   +        D+     +  D                       
Sbjct: 233 DEVNDVVLFVGDLNVDYHLNKTNQEYDEMLNIFEAKDPSAVHPRKLGNASDSDKKESAAE 292

Query: 234 ------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                     P+      +      +   +DY +  +   +     S+ + L        
Sbjct: 293 FKHLRKYSFDPRVNALAADGLSTDGSLELLDYILYSRTHRQPTTASSWVQPLTTSQPWMW 352

Query: 288 RG---KRLSDHCPISIDYDF 304
           R      LSDH P+  ++ F
Sbjct: 353 RNQPQYNLSDHFPVVSEFTF 372


>gi|187736008|ref|YP_001878120.1| Endonuclease/exonuclease/phosphatase [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187426060|gb|ACD05339.1| Endonuclease/exonuclease/phosphatase [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 336

 Score = 96.5 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 24/290 (8%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            + VRL++ N  N    ++          +       + +  +   A+IV L EMG   A
Sbjct: 62  GEPVRLLTMNAGNYFVPEDPRRSNFQVKYKPVEAREAVAELVRQSGAEIVGLCEMGGEAA 121

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           V  +  +      +     + +      +     +A+  K      +S   +       R
Sbjct: 122 VRDLQMRLKRKGVH-----LPYKVLVMRDGEDRGLALLSKYRIADDRSVTDMPVSGEAKR 176

Query: 140 A--GNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                R  ++  V   +G+   ++ IHLKS        +    +     ++A  L+D++ 
Sbjct: 177 KKTMLRGILDATVSMPDGRLFRLVGIHLKS------RLSRDGSAEDTRRREAYALRDYLN 230

Query: 197 QKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +       +P ++ GDFN   +                     P++              
Sbjct: 231 EALASQDGMPLLLYGDFNDGPSDSAVQVIQGPAKTEYRLNRLKPRDSRGETWTIYYEDGD 290

Query: 255 IP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                D+  ++    K L                    + SDH  + ++ 
Sbjct: 291 TYHSFDHLFLNNTLKKRL-----GRKPPMGILDSPPSLQASDHRGVWVEL 335


>gi|226496457|ref|NP_001148811.1| LOC100282428 [Zea mays]
 gi|195622288|gb|ACG32974.1| hydrolase [Zea mays]
          Length = 397

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/340 (13%), Positives = 89/340 (26%), Gaps = 48/340 (14%)

Query: 11  FFLVPCTASVAQK--------VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           F  +P   + +Q          RLVS+NI      +        ++  +  S    +   
Sbjct: 53  FAPLPTEQTESQTDGGAARYQFRLVSYNILAQVYVKSTLFPHSPSACLKWKSRSGAILTE 112

Query: 61  AKNLDADIVFLQEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            K+ DAD + +QE+  Y+    K    + +   Y                  +A  V+K+
Sbjct: 113 LKSFDADFMCIQELDEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSAELVQKE 172

Query: 120 NV-------------------------RVLQQSYPLLGAKDSFSRAGNR-----RAVELL 149
            +                            + + P    +   +    R       +   
Sbjct: 173 VILYNDLVEKYVPSDNVNSALENNSSAEXXKNAKPDNSKRGDPNDPRVRLKRDCVGLLAA 232

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            +++     +L +      +     +        L  +    +  I+ K       +IAG
Sbjct: 233 FKLSDPCDQILIVANTHIYWDPQWIDVKLAQAKYLLSRVSQFEQLISNKYNCKPSVIIAG 292

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           DFN        N      +   D         +          N        +DY  +  
Sbjct: 293 DFNSTPGDKVYNYLLSANLGSTDEAPIKLRSLYAANGGEPEYTNYTPGFTGTLDYIFLSD 352

Query: 265 NAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +                +        +  SDH PI  D+
Sbjct: 353 GSSIKPTSLLRLPRGDSEDVKGGLPNFRHPSDHLPIGADF 392


>gi|284121624|ref|ZP_06386820.1| Endonuclease/exonuclease/phosphatase [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829405|gb|EFC33793.1| Endonuclease/exonuclease/phosphatase [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 378

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 92/307 (29%), Gaps = 40/307 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSY 77
             +R+ +WNI       G    +       +D   L      +  D++ +QE      + 
Sbjct: 82  DTLRVGTWNIRWFPY--GSPPDRPDHSMAPTDLVWLTCTLVWMQTDLLVIQESLTTSEAR 139

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-----LQQSYPLLG 132
            A  +V            +  +    R   +  H  +      V +     L +      
Sbjct: 140 AAWDRVLTTLAQQTGDVWQWSVQSCGR--PDGHHVGVLWNASRVTLSTMQSLWRLNSKAT 197

Query: 133 AKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +     + G R      V+    +G    V+ +HLKS   +         +         
Sbjct: 198 SSQEPCKGGLRPGHYARVQSTHQHGADFHVIGLHLKSGPTVS--------AVGERHAALN 249

Query: 190 WLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            +   + +  E     +I GD N      + +         + +   +    F       
Sbjct: 250 RIDTAVARFLEQDRDVIILGDLNTMGAGDRHSQRSELKYLRRMVAKEEP--GFDDLSPKP 307

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------NEDDIKSRGKRLSDHC 296
             ++        +D+ ++ ++  + +   S     Y         + +     +RLSDHC
Sbjct: 308 RCSHYFRGRGEWLDHVLVAKDMTE-MRTRSARVTGYCAVAGCRRIKGEYPPAYRRLSDHC 366

Query: 297 PISIDYD 303
           P+ I+ D
Sbjct: 367 PVIIEID 373


>gi|327191270|gb|EGE58313.1| putative phosphatase protein [Rhizobium etli CNPAF512]
          Length = 659

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 79/315 (25%), Gaps = 65/315 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           V   S+NI      +G             D   + +      AD++ LQE+         
Sbjct: 372 VNFASYNIQYGFGLDG-----------RYDLPRIARSL--EGADVIALQEVTRGFSRNGF 418

Query: 75  -GSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                 +A +FP   W          E                   V  +      ++  
Sbjct: 419 ADMAADIAALFPDYFWVYGPACDLHVEAPEGVLSPVRGIRFQFGNMVLSRWPIASTRTLL 478

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L  ++        R A E ++   G  I V  +HL                   L+ Q  
Sbjct: 479 LPRSRTLGKINPQRGATEAVINAPGGAIRVYSVHLDHVSPD-----ERIRQLQFLNAQIN 533

Query: 190 WL----------KDWITQKKESLVPFVIAGDFNRKINYLGN-------NDDFWKTIDPND 232
                        ++   +      +VI GDFN +                + +      
Sbjct: 534 AFVREGGSLTGAAEFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAAGGYYGRVARIGT 593

Query: 233 SLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +  F   +  R  +           ++ +DY  +       L                 
Sbjct: 594 PVDAFAALEAYRPESYSWMNPEDHGERMHLDYCFVSCGLVSRLQSARI-----------D 642

Query: 288 RGKRLSDHCPISIDY 302
              + SDH P+ ++ 
Sbjct: 643 TQSQGSDHFPLWVEI 657


>gi|145297705|ref|YP_001140546.1| phospholipase C precursor [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850477|gb|ABO88798.1| putative phospholipase C precursor [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 438

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 90/299 (30%), Gaps = 42/299 (14%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
                K+++ S+N+  L                    TLL  Y K  DA  + LQE+   
Sbjct: 168 EPSESKLKVASYNVWALPVIASSIG---------ERLTLLPDYLKGYDA--LLLQEVFDG 216

Query: 77  --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                +  +  +  +      +         + +D    I  R   VR  Q  YP     
Sbjct: 217 RREGFLQALAKEYPYQTKVLDKP------GVNIHDGGVVIVSRYPIVREAQLVYPQCTGT 270

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D F+       +   V   GK   +   H  SF   ++ +        +   Q + L   
Sbjct: 271 DCFADK---GVMYAEVIKGGKAWHLFATHTASFDTDEARQLR-----QIQFGQIRTLAAS 322

Query: 195 ITQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR- 252
           +     +    +  GDFN     +  +       +D ++    +    ++  +   N   
Sbjct: 323 LK--IPASDTVIYGGDFNVNKRKFADDYASMLANLDAHEP--GYGGYTEATFDPRINPYA 378

Query: 253 --------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   N   +DY V+ +         +   I  + D        LSDH P+  +  
Sbjct: 379 GGPLSGGANVEYLDYLVVSREYGAASHNLNSVWIPRSSDGSLWPASNLSDHFPVKGEIS 437


>gi|268315822|ref|YP_003289541.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM
           4252]
 gi|262333356|gb|ACY47153.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM
           4252]
          Length = 338

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 107/321 (33%), Gaps = 49/321 (15%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-----TSDYTLLRQYAKNL 64
           +F   P     A+ +R+ + N   L +  G     +   +            + Q  + +
Sbjct: 36  LFVPEPPPEYRAEGIRIATLNTFFLFDGYGDEGQTDFPHKGNPEAARRHRARIAQVLRMI 95

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV- 123
           +AD+V LQE+ +   + ++  ++   + Y    +  H    +      A+  R    ++ 
Sbjct: 96  NADLVVLQEVENEEVLRRMVTEDLPDLNYEVHFVQGHD---TFTGQDVAVLSRLPVEKIG 152

Query: 124 -LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
             ++  P+ G  D++  + N   + + + +      ++ +H  +       +   S    
Sbjct: 153 RTEERVPVEGTDDTYGVSKN---IWVRLYLGDLPATIIGVHFLA-------QPDDSRRKP 202

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------------LGNN 221
               QA+ ++  + ++  +     + GDFN                           G +
Sbjct: 203 RREAQAEVIRRLVERELAAGRAVAVLGDFNDYDESVLDLNGHRPITRTLALVKAAGPGPD 262

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
           DD +  +       RF    D+  +          ID+ ++       L +  + +    
Sbjct: 263 DDLYNVMAEVPQHDRFTVFYDADEDWQVEWPELAAIDHVLLSPRLRARLREVHYVQAY-- 320

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                   + ++DH PI +  
Sbjct: 321 ------DPRTVTDHFPIVVTL 335


>gi|323494946|ref|ZP_08100037.1| exonuclease III [Vibrio brasiliensis LMG 20546]
 gi|323310741|gb|EGA63914.1| exonuclease III [Vibrio brasiliensis LMG 20546]
          Length = 268

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q       +D       R
Sbjct: 42  -------FPLEDVEAMGYKVYFHGQKAHYGVAMLCKKEPISVQKGFPTDNEDHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  + + NG+K+ +L+       F       +        Q    L  ++     +  
Sbjct: 91  MIMVTVEDDNGEKVTILN-----GYFPQGDNINHETKFPYKRQFYSDLMTYLNDHHTNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++      + KT+     +  F +   
Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEERQWLKTLLDWGFVDTFRQIHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  I+        + D      ++ S
Sbjct: 206 DVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAEKCIES-------DVDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|157146023|ref|YP_001453342.1| exonuclease III [Citrobacter koseri ATCC BAA-895]
 gi|157083228|gb|ABV12906.1| hypothetical protein CKO_01777 [Citrobacter koseri ATCC BAA-895]
          Length = 268

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 79/310 (25%), Gaps = 75/310 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L         D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLSAIVDKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   V  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPVSVRR-----GFPDDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSPLGSITVIN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLDNELKRDN 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N                               +   + I+    +  F    
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLIN-WGLVDTFRHAH 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +      +  ++          D      ++ 
Sbjct: 204 PETVDKFSWFDYRSKGFDDNRGLRIDLLLASNPLAEHCVETGI-------DYEIRSMEKP 256

Query: 293 SDHCPISIDY 302
           SDH P+   +
Sbjct: 257 SDHAPVWAKF 266


>gi|75471487|sp|Q9RLV9|PHLC_LISIV RecName: Full=Sphingomyelinase C; Short=SMase; AltName:
           Full=Sphingomyelin phosphodiesterase; Flags: Precursor
 gi|6006577|emb|CAA70683.2| sphingomyelinase-c [Listeria ivanovii]
          Length = 335

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 91/300 (30%), Gaps = 33/300 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
               ++ S N+   S      ++ N  +   +D      Y K  + D+V L E    +A 
Sbjct: 42  PGNFKITSHNVYLFSRN----IYPNWGQMHRADLIAQADYMK--NNDVVILNEAFDTSAS 95

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLG 132
            ++         + T  +          + +          +AV  +   V +  +    
Sbjct: 96  HRLLNNLREMYPHQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVVSQWPIVEKSQHIFQR 155

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              +  R  N+    + +  NGK   ++  H  +    D    +   S ++ ++Q Q ++
Sbjct: 156 GGGA-DRLSNKGFAYVKIMKNGKPYHIIGTHTPA----DDSLISKDTSRAIRAEQMQEIQ 210

Query: 193 DWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--- 248
            +I  +         I GD N        +D  +K ++ +       +        N   
Sbjct: 211 TFIAKKNIPKDEIIFIGGDLNVNYGTDEYHD-MFKLLNVSSPANFNGQMATWDPTTNSML 269

Query: 249 --KNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                +     +DY  ++    +     +      +         +       SDH P+ 
Sbjct: 270 KESYPKAAPEYLDYIFVENGHARPHSWHNKVLHTKSPQWSVKSWFKTYTYQDFSDHYPVV 329


>gi|308176500|ref|YP_003915906.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117]
 gi|307743963|emb|CBT74935.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117]
          Length = 279

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 82/311 (26%), Gaps = 71/311 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+ S N+N +                 +    +  +    D DI+ LQE+ + + +
Sbjct: 13  AGALRVASVNVNGIRA---------------AYKRNMADWIAARDVDILCLQEVRAPDKI 57

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +      W I ++  +          +     +AV  +   V  + +          R 
Sbjct: 58  LRDLIGEGWHILHAEAK----------DKGRAGVAVLSRTAPVAVREHIGEDYFAESGRW 107

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                VE   E+NG+   V+  ++ S       +         ++ +   L       K 
Sbjct: 108 -----VEADFEVNGEVFTVVSAYVHSGELGTQKQEDKYRFLQRMNVRLVEL-------KN 155

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------------DSLIRFPKEKD 242
                ++ GD N         +                                  +   
Sbjct: 156 EKDHVLVVGDLNVVHTQKDIKNWKPNHNKRAGVMDEEIAYFDGFFGPQIGYKDVARELAG 215

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           IDY +         I+          D   +   R S
Sbjct: 216 DVQGPYTWWSFRGQAFDNDAGWRIDYHMATPALAAKAIKSHV-------DRASAYDLRFS 268

Query: 294 DHCPISIDYDF 304
           DH P+ +DY F
Sbjct: 269 DHAPLVVDYQF 279


>gi|290998796|ref|XP_002681966.1| predicted protein [Naegleria gruberi]
 gi|284095592|gb|EFC49222.1| predicted protein [Naegleria gruberi]
          Length = 354

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/326 (13%), Positives = 93/326 (28%), Gaps = 56/326 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTT-----------------------SDYTLL- 57
              R+ S+N+  L  +   +  + +                             D   + 
Sbjct: 41  HTFRIASFNVENLYGRYCFNKAQMAKISKQCLGRKGSLEFGVNDVQTNLTIADEDSKRIT 100

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            +  K ++AD++ L E+ S   +        +    +    I    RD    I   +  R
Sbjct: 101 AEAIKQVNADVICLMEVESLQVLDSF--NEKYLQSMNYAYSILIDGRDP-RSIDVGVLSR 157

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENT 176
              V +    +     + +     +R  +EL +E  G   + +   HL S          
Sbjct: 158 YPIVNIRSNRHATYPGEKTRY-IFSRDLLELDIEFPGNNNLTIYATHLTSMSKGREESKD 216

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                     Q  ++ D I +  +       F++ GD N   +   +     K +  +  
Sbjct: 217 R------RLVQVDYICDRIEKSWKDKNYKGNFIVLGDMNDYNDSETS---LGKLLKHDHM 267

Query: 234 LIRFPKEKDSRC-NANKNLRNKIP--IDYFVMDQNAY---KFLIQESFSE---------I 278
                +   S     +   R      +DY  + ++            F +          
Sbjct: 268 ADIISQRLPSDEQWTHYYNRGNAYNQLDYMFISKHLLLRNPRAKPVIFRKGLPKRAHSFT 327

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +     + SDHCP+ +D  F
Sbjct: 328 GKRIKGVGQNEPKASDHCPVYVDLSF 353


>gi|121999062|ref|YP_001003849.1| exodeoxyribonuclease III Xth [Halorhodospira halophila SL1]
 gi|121590467|gb|ABM63047.1| Exodeoxyribonuclease III [Halorhodospira halophila SL1]
          Length = 267

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 78/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L                      ++ +A++    ++ LQE  +       
Sbjct: 1   MKIASWNVNSL----------------KVRLPQVKAWAQSATPSVIALQETKVPDDQFPL 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRA 140
           K   +  +   ++                +  +AV  ++  + +    P           
Sbjct: 45  KALQEAGYRAAFA------------GQRTYNGVAVLARSAPQDVVTDLPGFADT------ 86

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   V      + V+++++ +   + S +  Y        +  + L  W+ ++ E
Sbjct: 87  -QRRVLACTVS----GVRVINLYVPNGQEVGSEKYGYK------LRWLEALHHWVARELE 135

Query: 201 SLVPFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCN 246
           +    V+ GDFN        +D      K +             N  L+   +  +    
Sbjct: 136 AHEHVVVLGDFNIAPQAADVHDPAEWEGKVLFSQSERDALRGLLNLGLVDTFRLFEQPEG 195

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  ++          ID  +      +  +           D    R +R SDH P
Sbjct: 196 QFSWWDYRVNSFKRNRGLRIDLILASSALARACVAS-------RVDVEPRRWERPSDHAP 248

Query: 298 ISIDYD 303
           +  ++D
Sbjct: 249 VVAEFD 254


>gi|284029915|ref|YP_003379846.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283809208|gb|ADB31047.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 258

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 76/281 (27%), Gaps = 39/281 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VRL++WN+                 R       +    ++L  D+V +QE  S     + 
Sbjct: 10  VRLMTWNVWGRFGD-----------RWREREDAIVAVVRSLQPDLVAVQEAWSTPETTQ- 57

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +        +    D++ ++   +AV  +      Q + + G           
Sbjct: 58  ADVLGARLGLHAAFAKSRMPTDADPEVELGLAVLSRWPLAAVQRHHVRGET--------- 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+ +     G ++  +   L                      QA+ L + +        
Sbjct: 109 VALHIEPAAPGPRVDFVTTCLDW----------EEDHAEQRMAQAKVLDELVRDLTTRDG 158

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---IPIDYF 260
             V+AGD N   ++        + +    S         S  N             IDY 
Sbjct: 159 LVVLAGDLNAPPDHPEI-SLLTERMTDCWSGRADAGHTYSSGNPYLGHGEWIEDHRIDYI 217

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +        L           ED+        SDH  +  D
Sbjct: 218 LATHRDPHRLQVLDAGIRGLTEDNGLP----PSDHYAVFAD 254


>gi|194099379|ref|YP_002002479.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae NCCP11945]
 gi|240014802|ref|ZP_04721715.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae DGI18]
 gi|240116328|ref|ZP_04730390.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID18]
 gi|240121325|ref|ZP_04734287.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID24-1]
 gi|268601995|ref|ZP_06136162.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID18]
 gi|193934669|gb|ACF30493.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae NCCP11945]
 gi|268586126|gb|EEZ50802.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID18]
          Length = 256

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++V              S      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHF-----GLPSLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RIDLETRALERPSDHAPVA 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|5802873|gb|AAD51807.1|AF172851_1 unknown [Chromobacterium violaceum]
          Length = 542

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 77/275 (28%), Gaps = 26/275 (9%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           R  + A +       A+  + ++L +WN   L      +L+ N  +    +        +
Sbjct: 5   RFLLCAALSLPAASHAAYPEDLKLATWNAMLLP----QALYPNYGQMRRVELMAAAPILQ 60

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFY-------STERLINHSKRDSNNDIHTAIA 115
               D++  QE+    A  K+         Y       + +        +        +A
Sbjct: 61  AQ--DVLVFQELQDNAASDKLLALLRPRFPYQTPVIGRAQQGWDGTEGWNGMKPEDGGVA 118

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  +   V ++ Y       S+     +      + +NG+   V+  HL+S    +    
Sbjct: 119 IASRWPIVEKRQYLFQTPGCSWDGQALKGFAYARIAVNGQFYHVIGTHLQS----EDSGC 174

Query: 176 TYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS- 233
                  +   Q + +  W+  +        ++AGD N               +   +  
Sbjct: 175 ANHADIGVRQAQLREIAAWVQSRHLPVEETVIVAGDMNIDRYKSAEYRAMLDILQAGEPR 234

Query: 234 -------LIRFPKEKDSRCNANKNLRNKIPIDYFV 261
                                 +       +DY +
Sbjct: 235 YAGMPHSFDTAGNGIALERYGARGGDAPEYLDYIL 269


>gi|126739194|ref|ZP_01754888.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. SK209-2-6]
 gi|126719811|gb|EBA16519.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. SK209-2-6]
          Length = 331

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 102/330 (30%), Gaps = 51/330 (15%)

Query: 24  VRLVSWNINTL----SEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMG 75
           +RL ++N+         Q+ + L  +   R   D       L    + LDAD + + E  
Sbjct: 1   MRLATYNVEWFANLFGPQDQLLLDDHPSGRYGIDRYSQAMALAAVFQRLDADAILVVEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           +     +                 + +     ND H  IA+      +  +  P    K 
Sbjct: 61  NTGREQRSTRALA-NFAAEAGLRTSEAIAGFANDTHQEIALLYDPAVLSVRHDPKSAPKA 119

Query: 136 SFSRAGNRRAVELL-----------------VEINGKKIWVLDIHLKSFCFLDSLENTY- 177
                  R  +++                     +G+ I ++  HLKS     +      
Sbjct: 120 PRFDGVFRIDLDVDDQMDEVRFSKPPLELALTTKSGRAIRLIGAHLKSKAPHGARNEEDV 179

Query: 178 ----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------- 226
                 +      QA WL   + Q  ++    ++ GD N           F +       
Sbjct: 180 VQISIANRRKQLAQAIWLHRRVKQHVQAREDLIVLGDLNDGPGLDEYERLFGRSSVEIVM 239

Query: 227 ---TIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAY----KFLIQES 274
                DP+   +  P+           N          +DY ++  +      K+ I   
Sbjct: 240 GQELTDPHAQSLLKPRRHVLPSTSRFFNPETKRYFSALLDYVMISNSLLSGEPKWRIWHP 299

Query: 275 FSE-ILYNEDDIKSRGKRLSDHCPISIDYD 303
           F +   Y ++D+++     SDH P+++D +
Sbjct: 300 FEDAECYEDEDLRNALLAASDHFPVTLDLN 329


>gi|325293099|ref|YP_004278963.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3]
 gi|325060952|gb|ADY64643.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3]
          Length = 265

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 86/304 (28%), Gaps = 66/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+   DIV LQE+ S   V + 
Sbjct: 1   MKIATWNING----------------VKARIENLCQWLKDSSPDIVCLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+              +            +A+  K               D  +R    
Sbjct: 42  FPRLELEAL-------GYHVETHGQKGFNGVALLSKMKPDEINHGLPGDDADEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +  ++G  I V  ++L +    D                 + L+ +   +     
Sbjct: 92  --IEGVFSVDGGAIRVCSLYLPNGNPPDDPVK-----YPYKLAWMERLRRFAEDRLALEE 144

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249
           P ++AGD+N      +           +             N       +          
Sbjct: 145 PLILAGDYNVIPEPFDCHDPRVWAGDALFLPKTRSAFRRLENLGFTDAARATTDEPGLYS 204

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L   S  + +          ++ SDH P+  
Sbjct: 205 FWDYQAGAWPKNNGIRIDHLMLSAEAADRLESVSIEKHV-------RAWEKPSDHVPVCG 257

Query: 301 DYDF 304
            ++F
Sbjct: 258 YFNF 261


>gi|323465309|gb|ADX77462.1| beta-hemolysin [Staphylococcus pseudintermedius ED99]
          Length = 330

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 102/300 (34%), Gaps = 34/300 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++L + N+  LS      L+ N  +   +D     +Y +  D D+V   E     +  +
Sbjct: 39  ELKLATHNVYMLS----GFLYPNWGQSKRADLISKSKYIQ--DNDVVIFNEAFYPASANQ 92

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134
           +F        Y T  L   +      + H          +A+  K     +  + +    
Sbjct: 93  LFNNLKSSYPYQTAVLGRSTSGWDRTEGHYSSTTFENGGVAIVSKYPIRERIQH-IFQHG 151

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK + V+  H +S    +    +     ++ ++Q + + ++
Sbjct: 152 CGFDNDSNKGFVYTKIEKNGKFVHVIGTHTQS----EDTRCSVGQDRAIRAEQMKEISNF 207

Query: 195 IT-QKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNA 247
           +  +         I GD N   N   G   D  K ++ +D                    
Sbjct: 208 VKSKNIPKDEVVYIGGDMNVNKNAGNGEFQDMLKNLNVSDVTYTGHSSTWDPQSNSIAKY 267

Query: 248 NKNLRNKIPIDYFVMDQNAYK-------FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           N        +DY  +D++  +        + ++S +  +Y    +       SDH P+  
Sbjct: 268 NYPNSAPEYLDYIFVDKDHRQPGQLINEAVAEKSPTWDVYKFPYLYVYNDY-SDHYPVKA 326


>gi|55379934|ref|YP_137784.1| hypothetical protein rrnAC3397 [Haloarcula marismortui ATCC 43049]
 gi|55232659|gb|AAV48078.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 277

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 77/292 (26%), Gaps = 33/292 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           C  +  +  R++S+N+   +  +GV  W +          L+    +  + DI+ +QE  
Sbjct: 10  CQRTHMKPTRVMSFNVRYDTAGDGVDGWPH-------RRRLVAGTIQYHNPDIIGVQEAM 62

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           ++         + +         ++     +                      P   +  
Sbjct: 63  AHQLRELEVLLDGYEWVGDPRESVDAGGEHTAIGYRAERFDCAATNTFWLSEQPAEPSSV 122

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            +  A  R A    +        +L ++                      +  + + D +
Sbjct: 123 GWDAAYPRVATWARLRDRDTDDDLLCLNTHL----------DHQGADARVEGIELVLDHL 172

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--- 252
                   P V+ GDFN  +            +     L+              +     
Sbjct: 173 DS-ATRDAPAVVMGDFNCVVGEPAYERAEGHELPDGRRLVDTRNTATVTHGPTTSRTDFH 231

Query: 253 ---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               ++ ID+  + ++                    +      SDH P+ +D
Sbjct: 232 DLLPEMGIDHVFVSEDVA---------VDTRAVIADRDDDHYGSDHLPVVVD 274


>gi|146311351|ref|YP_001176425.1| exonuclease III [Enterobacter sp. 638]
 gi|145318227|gb|ABP60374.1| Exodeoxyribonuclease III [Enterobacter sp. 638]
          Length = 268

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEDVAKLGYNVFYHGQKGHYGVALLTKQTPISVRR-----GFPGDDGEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +       ++  Q L+D++T +     
Sbjct: 90  RIIMAEIPSPLGNITVIN-----GYFPQGESRDHPTKFPAKAKFYQDLQDYLTTELNKEN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++ + +     +  F     
Sbjct: 145 PVLIMGDVNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWMQRLQSWGLVDTFRAANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  I+          D      ++ S
Sbjct: 205 DTQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAERCIETGI-------DYDIRGMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWAKF 266


>gi|134291232|ref|YP_001115001.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
 gi|134134421|gb|ABO58746.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
          Length = 263

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 80/288 (27%), Gaps = 56/288 (19%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             P  A     +R+ ++NI+                        +    + LDAD++ LQ
Sbjct: 18  AAPAGAPRGHDLRIATYNIHG-----------GYGAWPARAVERIVAVIRELDADVIALQ 66

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+          P     +  +T             +     AV  +      ++  L  
Sbjct: 67  EVPLGGTR---APDVLAHLRDATGMHAAAGPTIDTPERRYGNAVLSRCPIRAARTLDL-- 121

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              SF +   R A++  ++ +   I V+  HL               S +  S Q Q L 
Sbjct: 122 ---SFHQREPRGALDADIDCSAGPIRVVATHLGL-------------SANERSAQVQRL- 164

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             +       +P ++ GD N         + F +         RF +    R        
Sbjct: 165 --LAAFDTGAMPVILMGDIN---------EWFVRGRALQALTTRFRRAPAPRTFPTAWPV 213

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +D   +               ++          +  SDH P+  
Sbjct: 214 FS--LDRIWIHPG----------ELLVDVAVHRSMLARHASDHYPLVA 249


>gi|120598407|ref|YP_962981.1| exonuclease III [Shewanella sp. W3-18-1]
 gi|146293514|ref|YP_001183938.1| exonuclease III [Shewanella putrefaciens CN-32]
 gi|120558500|gb|ABM24427.1| Exodeoxyribonuclease III [Shewanella sp. W3-18-1]
 gi|145565204|gb|ABP76139.1| Exodeoxyribonuclease III [Shewanella putrefaciens CN-32]
          Length = 270

 Score = 96.2 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 80/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 S    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RSRLHQLQALIDSHKPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K      Q     G       A  R
Sbjct: 42  -------FPLAEVEAMGYQVHYHGGKAHYGVAMLSKVAPQKIQK----GFPSDDEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + V +       F       +        +  Q L  ++     +  
Sbjct: 91  MIIGTFSQANGRPLTVFN-----GYFPQGESIDHPTKYPAKRKFYQDLMHYLQTNHSNDE 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                               ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLIDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +   +    L++        + D       + S
Sbjct: 206 ERTERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLVES-------DVDYDLRGIDKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|323443048|gb|EGB00669.1| beta-hemolysin [Staphylococcus aureus O46]
          Length = 331

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 55/298 (18%), Positives = 91/298 (30%), Gaps = 32/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS N+  LS      L+ N  +   +D      Y K  + D+V   E     A  K
Sbjct: 43  DLKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDK 96

Query: 83  VFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T                  S       +A+  K     +  +      
Sbjct: 97  LLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC 156

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK + V+  H +S        +       + ++Q + + D+
Sbjct: 157 -GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGTGHDRK----IRAEQMKEISDF 211

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNAN 248
           + +          I GD N          D  K ++ ND L                  N
Sbjct: 212 VKKKNIPKDETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYN 270

Query: 249 KNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
                   +DY   D++  +   L+ E  +E     D        +    SDH PI  
Sbjct: 271 YPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 328


>gi|241766052|ref|ZP_04763968.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
 gi|241363933|gb|EER59221.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
          Length = 249

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 88/289 (30%), Gaps = 54/289 (18%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            +  +R+ ++NI+           +        +   L    + LDADIV LQE+   + 
Sbjct: 7   SSDILRVATYNIH--------KGVQGIGPARRLEIHNLGLAVEQLDADIVCLQEVRKVH- 57

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGA 133
             +      W      E L                      A+  +   +  Q       
Sbjct: 58  RREAAYFERWPDVPQAEYLAPEGYEAVYRTNAFTRHGEHGNALLSRWPVIGHQH-----E 112

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             S  R   R  + + ++ +G+++ V+ +HL                     +Q + L+ 
Sbjct: 113 DISDHRFEQRGLLHVELDAHGRRVHVIVVHLGLIPGS-------------RVRQVERLQQ 159

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           +I ++  +  P V+AGDFN         D   +          +  +   R         
Sbjct: 160 FIEREVPTGSPVVVAGDFN---------DWGLQIKRMLSGFGLYEFDA-PRAFTYPARLP 209

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +D+  +       L                    R+SDH P+  ++
Sbjct: 210 LVQLDHVYVRG-----LSPIGLHVPRGRI------WWRMSDHLPLIAEF 247


>gi|239928478|ref|ZP_04685431.1| hypothetical protein SghaA1_09638 [Streptomyces ghanaensis ATCC
           14672]
 gi|291436804|ref|ZP_06576194.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339699|gb|EFE66655.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 290

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 86/291 (29%), Gaps = 61/291 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
            +R+ ++NI+  +  + V            D     +  ++L AD++ LQE+  +     
Sbjct: 43  PLRVATYNIHAGAGADQVF-----------DLDRTARAVRDLRADVIGLQEVDVHWGARS 91

Query: 80  -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   +  K    +F++    ++ +           +AV  +   +  +++ +    
Sbjct: 92  DFVDEARALAGKLGMRVFFAPIYDLDPATPG-GERRRFGVAVLSRYPVLEAENHEITRLS 150

Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                     A    E+ V + G  + V   HL            Y    S+ + Q   +
Sbjct: 151 TQTPDPVPAPAPGFAEVTVAVRGAHVHVYSTHL-----------DYRADPSIRAAQVADM 199

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + +        P V+ GDFN +          W+ +                      +
Sbjct: 200 LEVL---AADRGPKVLVGDFNAEATAAEL-APLWRRLRDAAP---------GGGGTYPAV 246

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID   +  +                    ++   R SDH P+  D 
Sbjct: 247 DPVKRIDLVTVSPDI--------------TVVGAEAVATRASDHRPVVADL 283


>gi|188574659|ref|YP_001911588.1| nuclease [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188519111|gb|ACD57056.1| nuclease [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 572

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 85/324 (26%), Gaps = 35/324 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV------KRTTSDYTLLRQY 60
           L L          V   +R+ S+ +       G      +       ++  +    L   
Sbjct: 256 LTLPAMPTAVAPQVGGDLRIASFKLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIA 115
              L AD+  L E+ +    A            +         I+       + I   I 
Sbjct: 316 IVPLGADVAALMELENDGNAADAAVAQLVAALNAAGKDKDWHFIDSGSGPGADAIRVGIV 375

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKS-FCFLDSL 173
            R   V  + +   L G         +R  +    +   G    V+  H KS  C   S 
Sbjct: 376 YRSSQVTPVGKPATLTGGPFDNH---SRVPLAQAFLSTRGATFVVVANHFKSKGCGNASG 432

Query: 174 ENTYSPSCSLLSQQ-----AQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWK 226
            +                 A+ L +W+            V+ GDFN     +        
Sbjct: 433 ADADQQDGQACWNATRTESAKGLHEWLQTDPTGAQTKRAVLVGDFNAYAMEMPMRS---- 488

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +     F      +  +  +       D+ ++     K L       I  +  D  
Sbjct: 489 -LRASGWQDAFAVAGVKQPYSFVDDGMSGRQDHALLSPAMAKQLRGAVEWHINADVMDAA 547

Query: 287 SRG-------KRLSDHCPISIDYD 303
                      R SDH P+ + + 
Sbjct: 548 GYAKRNLPGPWRSSDHDPVLLGFS 571


>gi|294141585|ref|YP_003557563.1| exodeoxyribonuclease III [Shewanella violacea DSS12]
 gi|293328054|dbj|BAJ02785.1| exodeoxyribonuclease III [Shewanella violacea DSS12]
          Length = 268

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 89/309 (28%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN                   +    L+        DI+ LQE     A  +V
Sbjct: 1   MKIVSFNING----------------IRARLHQLQALIDAHQPDIIGLQE---TKAHDEV 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP        +    + +         H  +A+  K   +  Q     G       A  R
Sbjct: 42  FPA-------ADVEAMGYKVHYHGGKAHYGVAMLSKLEPIKVQK----GFPTDSEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + VL+       F      ++        Q  + L  ++ +      
Sbjct: 91  MIMATFTQENGRPLTVLN-----GYFPQGDNISHETKYPAKRQFYKDLMTYLNENHTPDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPMDLDIGIGEPNAKRWLRTGKCSFQPEEREWLKTLMDWGLVDTFRELHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +  ++  + L++        + D      ++ S
Sbjct: 206 ERTERYSWFDYRSKGFVDNRGLRIDVVLATKSLNERLVES-------DVDYDLRAIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSSF 267


>gi|289207194|ref|YP_003459260.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix]
 gi|288942825|gb|ADC70524.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix]
          Length = 255

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 80/304 (26%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N+L                      +  +  +   DI+ LQE          
Sbjct: 1   MKIASWNVNSL----------------KVRLPQVLDWLGSSRTDILALQET--------- 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S      +    S    +  +A+  +       + P             R
Sbjct: 36  -KLTDENFPVSAIHEAGYEVVYSGQKTYNGVAILSRTQATDVVTDP------PGLEDAQR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V+++++ +   + + +  Y             ++ W+  + E+  
Sbjct: 89  RILAATI----GDIRVVNLYVVNGENVGTEKYAYKLD------WLARMRSWLAAEIEAHP 138

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN        +D                    +        F +  +      
Sbjct: 139 KLVVLGDFNIAPEDRDVHDPEAWHERILCSTPEREALAALTELGLADTF-RAFEQPEEEF 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID  +      K L            D      +R SDH P+ 
Sbjct: 198 SWFDYRAASFRRNRGLRIDLVLASPALLKRLTAAGI-------DREPRGWERPSDHAPVW 250

Query: 300 IDYD 303
            ++ 
Sbjct: 251 AEFS 254


>gi|15965796|ref|NP_386149.1| hypothetical protein SMc04274 [Sinorhizobium meliloti 1021]
 gi|15075065|emb|CAC46622.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
          Length = 368

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 118/366 (32%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLLRQY------------ 60
            +RL ++NI  L  +   S ++N +K          R+ ++Y  L +             
Sbjct: 2   SLRLATFNIENLMSRFDFSGFRNQLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDTRQM 61

Query: 61  ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                 + DADI+ LQE  +  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  SALAIADCDADILCLQEADNMAALQAFEYGYLFRMAGNGYRQKYLVEGNDSRGIDVAVLM 121

Query: 117 RK------KNVRVLQQSYPLLGAKDSF-------------SRAGNRRAVELLVEINGKKI 157
           R+      K   +  +S+  L  +D                R   R  +E+ V I G+ +
Sbjct: 122 REETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV----PFVIAGDFNR 213
            +  +HLKS        +    + ++   + + ++  I ++          F I+GD N 
Sbjct: 182 TLYVVHLKSMGPAREGLDGRQATMAVRIAEVKAVRHIIERRFGRGHTADKVFAISGDMND 241

Query: 214 ---KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------------- 254
              K+  LG+  + ++ +   ++              N NLR                  
Sbjct: 242 YQEKVKVLGDRRNGYEFLPHEETTSALDVLSHDGFVENPNLRRPVLDRWTLFHSRGPEDR 301

Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILY---------------NEDDIKSRGKRLSDHCP 297
               +DY  +     +         I                           + SDHCP
Sbjct: 302 HLCQLDYIWLSPELARRNAARLPEIIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 VVMTLD 367


>gi|325918813|ref|ZP_08180896.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC
           35937]
 gi|325534959|gb|EGD06872.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC
           35937]
          Length = 1032

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/340 (10%), Positives = 92/340 (27%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     D++
Sbjct: 415 PAPLPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHAPDVL 474

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK------- 118
              E+ + + +  +  +       + ++   +     + +    I     V+        
Sbjct: 475 GTVEVENLSVLQTLAARINADAVAAGQQDPRYVAYLQEGNDVGGIDVGFLVKTAEVAGGV 534

Query: 119 KNVRVLQ-----QSYPLLGAKDSFSRAGNRRAVELLVEINGK-----KIWVLDIHLKSFC 168
           + V VL      ++          S   +R  + L   ++        +  + +H +S  
Sbjct: 535 QRVEVLSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTANVHQADGRTLPLTAIVVHQRSLN 594

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225
             ++ +   +   +    QA++L   +   Q+       ++ GDFN      G  D    
Sbjct: 595 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQVNPDEKVLVMGDFNAFEFNDGYVDAMGT 654

Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D          ++  +     N   +D+ +      +
Sbjct: 655 VTGKPAPDAQTVVGGDGADLVDPDYTDLTWFNTPNQSYSYAFDGNVQSLDHILASDALMR 714

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S        +               RLSDH P  +
Sbjct: 715 APQIASLLVGHARINADFPGTARNDANTPTRLSDHDPTVV 754


>gi|296273651|ref|YP_003656282.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM
           7299]
 gi|296097825|gb|ADG93775.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM
           7299]
          Length = 517

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 97/353 (27%), Gaps = 80/353 (22%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLW----------KNSVKRTTSDY 54
            +  +         ++A+   + S+N+    + +                 +     +  
Sbjct: 2   IIRTIFLIFFTYNLTLAKDFTVASYNVENFFDLKYDKTEYKEFIPNTKSNWNKTTYNTKL 61

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             + +   +LD D++ LQE+ S  A  ++        +   ++    S           +
Sbjct: 62  KHIVKVINDLDKDVIALQEVESKQAFDELAKNLPQYKYSIFKKYKTSS---------IGL 112

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  K               D      NR  +++ + I+  K  V + H  S        
Sbjct: 113 AILSKYEI------SDYKLIDVKHSKVNRPILKVTLNIDNHKFIVFNNHWPS-------- 158

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LG 219
                  S     AQ ++++I       V +VI GD N   N                 G
Sbjct: 159 --KRNEESQRVLYAQAIEEYIK-NLNEDVDYVILGDLNSNYNEFETFKYSKLNNTYDLTG 215

Query: 220 NNDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
            ND    +I                     + +   ++  + K        D  V+ +  
Sbjct: 216 INDVLNTSIKGKFISKNEILKYDKKVHYNLWLELNYNQRFSYKFRGENETPDNIVLPKAL 275

Query: 267 YK----FLIQESFSEI------------LYNEDDIKSRGKRLSDHCPISIDYD 303
           +       +  SF                +   +   +    SDH PI   + 
Sbjct: 276 FDNKNISYVNNSFQVFKPNYLIKDGKIFRWKIKNNIHQNIGYSDHLPIYATFT 328


>gi|300716986|ref|YP_003741789.1| exodeoxyribonuclease III [Erwinia billingiae Eb661]
 gi|299062822|emb|CAX59942.1| Exodeoxyribonuclease III [Erwinia billingiae Eb661]
          Length = 272

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 81/311 (26%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIIEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  K+  +  +       ++S      R
Sbjct: 42  FP-------LEEVSKLGYHVFYHGQKGHYGVALLTKDEPLAVRRGFAGDDEES-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + VL+       F       +        +  + L+ ++   ++   
Sbjct: 90  RMIMADIATPVGTLTVLN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLENDQKPTN 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P VI GD N                               +   + +          +  
Sbjct: 145 PVVIMGDMNISATDLDIGIGEDNRKRWLRTGKCSFLPEEREWMDRLMGWGLVDTWRAENA 204

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           ++  +       +           ID  +  Q      +           D      ++ 
Sbjct: 205 EAN-DRFSWFDYRSKGFDDNRGLRIDLVLASQPLAARCVATGI-------DYDIRSMEKP 256

Query: 293 SDHCPISIDYD 303
           SDH PI   ++
Sbjct: 257 SDHAPIWAQFN 267


>gi|221134651|ref|ZP_03560954.1| exonuclease III [Glaciecola sp. HTCC2999]
          Length = 269

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 72/310 (23%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN                   +    L+    +   D++ LQE+   NA    
Sbjct: 1   MKIISFNING----------------IRARLHQLQALIDSHSPDVIGLQEIKVDNA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S    + +         H  +A+  KN  +  Q     G          R
Sbjct: 41  ------QFPISDVEAMGYHVVYHGQKAHYGVAMLTKNPPISVQ----YGLPSDTDEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                L   NGK I + +       F       +           + L   +        
Sbjct: 91  LIAVTLPTNNGKDITIYN-----GYFPQGENIKHDTKFPYKVDFYRDLTAHLAATHGPDD 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               D   T+        F     
Sbjct: 146 QVIVMGDINISPTDLDIGIGPDNAKRWLRSGKCSFQPIERDMLATLQALGYHDTFRCLTP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            + +       +           ID  +          +          D      ++ S
Sbjct: 206 EKTDRYSWFDYRSKGFVDNRGLRIDVILASTTLLPLCTESEI-------DYELRGIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 259 DHAPIFAVFS 268


>gi|113971368|ref|YP_735161.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4]
 gi|113886052|gb|ABI40104.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4]
          Length = 870

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/378 (11%), Positives = 101/378 (26%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66
             + +    +R+ S+N+          +      N    T          +      ++A
Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRAKIVSAITAMNA 514

Query: 67  DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +     K                +N +     T+      K   ++ I   
Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTAENAYSFVEITDEDKYDGKYFGSDAITVG 574

Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                  + +        +  + A  R ++    +I+ +
Sbjct: 575 MLYRAGKVSLAGAARAIDTPEQHATAGSVTRVKDGKTETNPGNDAYQRHSLAQTFKIHEQ 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 NLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALKDVKGDLLV 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  D++   +        W T+D                 +    +
Sbjct: 695 IGDMNAYGMEDPIRVLTDYDASKSERDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTQ 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKFSGELAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ +   +
Sbjct: 815 ENAFSASDHDPVIVALSY 832


>gi|114046447|ref|YP_736997.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-7]
 gi|113887889|gb|ABI41940.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-7]
          Length = 870

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/378 (11%), Positives = 101/378 (26%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66
             + +    +R+ S+N+          +      N    T          +      ++A
Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRAKIVSAITAMNA 514

Query: 67  DIVFLQEMGSYNAVAKVF-------------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +     K                +N +     T+      K   ++ I   
Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTAENAYSFVEITDEDKYDGKYFGSDAITVG 574

Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                  + +        +  + A  R ++    +I+ +
Sbjct: 575 MLYRAGKVSLAGAARAIDTPEQHATAGSVTRVKDGKTETNPGNDAYQRHSLAQTFKIHEQ 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 NLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALKDVKGDLLV 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  D++   +        W T+D                 +    +
Sbjct: 695 IGDMNAYGMEDPIRVLTDYDASKSERDIMTASWTTLDGKVFERQGSKIEKGYGLINLNTQ 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGAGTYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKFSGELAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ +   +
Sbjct: 815 ENAFSASDHDPVIVALSY 832


>gi|88607141|ref|YP_505100.1| exodeoxyribonuclease III [Anaplasma phagocytophilum HZ]
 gi|88598204|gb|ABD43674.1| exodeoxyribonuclease III [Anaplasma phagocytophilum HZ]
          Length = 273

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 85/310 (27%), Gaps = 69/310 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WN+N                        L         D+  LQE+   N     
Sbjct: 2   IRVITWNVN----------------SIRKRIEHLCSVLSEHSIDVAMLQEIKCTNE---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK------DSF 137
                    +     + +            +A+  K   V   SY +L          S+
Sbjct: 42  ------QFPFVELEALGYKCYVHGQKSRNGVAIISKLPVVEVVSYSVLDEGKELESAGSY 95

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S   +R     L     KKI V+ +++ +   ++S    Y        +  + LKD +  
Sbjct: 96  SSEESRYIECTLECTGNKKIRVVSVYVPNGQEVESETFFYK------LKFLEHLKDRLLN 149

Query: 198 KKESLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKD 242
             ++    +  GDFN     +  +D                 ++ I  N  +  F     
Sbjct: 150 IMKTEDFLIAGGDFNVAPEEIDVHDPKALDGRLCFHILERAKFREILNNGIVDIFRTFVG 209

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +        ++  S    +             S
Sbjct: 210 IDRKEFSWWNYREGGWQNNRGLRIDALLSSPQIADKVLDCSILSKV-------RGWDTPS 262

Query: 294 DHCPISIDYD 303
           DH P+  D D
Sbjct: 263 DHAPVMGDID 272


>gi|307942540|ref|ZP_07657888.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4]
 gi|307774179|gb|EFO33392.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4]
          Length = 269

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 85/310 (27%), Gaps = 72/310 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78
             +++LV+WNIN                       ++ +    +  D++ LQE      N
Sbjct: 2   TNRLKLVTWNIN----------------SVRLRMPIVERLLAEVQPDVLCLQETKCPDAN 45

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              K F    +                +    +  +A   +      +        DS  
Sbjct: 46  FPEKAFKAAGYNHIA-----------INGQKGYHGVATVSRLPLSNVEKREFCQMGDSRH 94

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  + + VE+ G+ + V + ++ +    D  +   +       +    +K+W+T  
Sbjct: 95  -------IAVDVELAGQAVRVHNFYVPAG--GDEPDPEKNDKFDHKLKFMNEMKNWLTGP 145

Query: 199 KESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           + +  P V+ GD N                   +     + F    +  + L    +   
Sbjct: 146 ETAK-PAVLVGDLNVAPYEHDVWSHKQLLKVVSHTPIETELFEAVRESGNWLDAMRQFTP 204

Query: 243 SRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                      +            +D+  +       +                   ++ 
Sbjct: 205 MEEKLYTWWSYRAKDWSKADKGRRLDHVWVSDPLKSAIKSTEV-------LRDARGWEKP 257

Query: 293 SDHCPISIDY 302
           SDH P+  D+
Sbjct: 258 SDHAPVVADF 267


>gi|99081700|ref|YP_613854.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040]
 gi|99037980|gb|ABF64592.1| Endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040]
          Length = 344

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 94/329 (28%), Gaps = 49/329 (14%)

Query: 24  VRLVSWNINTL----SEQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQEMG 75
           +RL ++NI         Q+ + L      R      +    +    + +DAD + + E  
Sbjct: 1   MRLSTYNIEWFEALFDAQDQLQLDSAPSARHEISRGAQAEAIADVLRAIDADGIVIIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKK-----NVRVLQQSYP 129
           +                ++  R  +      ++     A           +  +     P
Sbjct: 61  NSGKHQSTERALVRFAEWAGLRTRDVVMGFANDTRQEIAFLFDSNVLTAEHAPLDTARAP 120

Query: 130 LLGAKDSFSRAGNRRAVELLVEIN----------GKKIWVLDIHLKSFCFLDSLENTYSP 179
                       + +A  +               G    ++  HLKS     +     + 
Sbjct: 121 RFDGTFEMDLDVDAKADLVRFSKPPMELLVTPRTGPPFHLIGAHLKSKAPHGARTPEEAR 180

Query: 180 SC-----SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226
           +           QA WL+  +  + E+  P V+ GD N           F +        
Sbjct: 181 AMSIANRRKQLAQAVWLRARVEDRLEAGAPLVVMGDLNDGPGLDAYEALFGRSSVEIIMG 240

Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYK----FLIQESF 275
               DP+   +  P ++    +A           +  +DY ++          + I   F
Sbjct: 241 QELFDPHARHLLRPNQQGLPTSARFYNHLEGRYFQALLDYIMISPPLQACAPRWRIWHPF 300

Query: 276 SE-ILYNEDDIKSRGKRLSDHCPISIDYD 303
            +   Y    +       SDH P+++D D
Sbjct: 301 EDAACYGTPSLCHALLTASDHFPVTLDLD 329


>gi|323356326|gb|EGA88128.1| Ccr4p [Saccharomyces cerevisiae VL3]
          Length = 837

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/327 (11%), Positives = 84/327 (25%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L++   + D+D++ LQE+ S 
Sbjct: 501 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 560

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       I  ++   +++ +       
Sbjct: 561 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 620

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 621 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 680

Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNNDDF------------- 224
             L D +    +              P +I GDFN  IN                     
Sbjct: 681 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELIXTGRVQIHQEGNGR 740

Query: 225 -WKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
            +  +   +       +    C       N        IDY            +      
Sbjct: 741 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 800

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH P+   ++F
Sbjct: 801 EYVSKFIGFPNDKFPSDHIPLLARFEF 827


>gi|163750216|ref|ZP_02157458.1| exodeoxyribonuclease III [Shewanella benthica KT99]
 gi|161330072|gb|EDQ01056.1| exodeoxyribonuclease III [Shewanella benthica KT99]
          Length = 268

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 87/310 (28%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN                   +    L+        DI+ LQE  +++ V   
Sbjct: 1   MKIVSFNING----------------IRARLHQLQALIDAHQPDIIGLQETKAHDDV--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   V  Q     G       A  R
Sbjct: 42  -------FPAADVEAMGYKVHYHGGKAHYGVAMLSKLEPVKVQK----GFPTDSEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + VL+       F      ++        Q  + L  ++ +      
Sbjct: 91  MIIATFTQENGRPLTVLN-----GYFPQGDNVSHETKYPAKRQFYKDLMTYLNENHTPDE 145

Query: 204 PFVIAGDFNRKINYLG---------------------NNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N     L                         ++ KT+     L  F +   
Sbjct: 146 DIAIIGDINISPVDLDIGIGEPNAKRWLRTGKCSFQVEEREWLKTLMDWGLLDTFRELHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +  ++  + L++        + D      ++ S
Sbjct: 206 QRTERYSWFDYRSKGFVDNRGLRIDVVLATKSLNERLVES-------DVDYDLRAIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 259 DHAPIWSSFS 268


>gi|110803483|ref|YP_698449.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens SM101]
 gi|110683984|gb|ABG87354.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens SM101]
          Length = 262

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 92/291 (31%), Gaps = 45/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+    + +  + W       +     + +  K+   DI+ +QE   +      
Sbjct: 4   LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGIQEGLIHMLDDMD 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137
              + +         +      +  D   AI   K    VL+         P +     F
Sbjct: 57  DLLDEYS-------WVGEDGEGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109

Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           + +  R   +L +  +I+G KI + + HL         E        ++ ++ +      
Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRN 253
              +    P++I GDFN  +     N    +  +     + +   K              
Sbjct: 159 KNYEIYKTPYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY 218

Query: 254 KIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               IDY +  +                N DD K      SDH P+  + +
Sbjct: 219 DGRIIDYILYSKE---------CEIKSLNIDDRKINWGYPSDHYPVICELE 260


>gi|77461149|ref|YP_350656.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens
           Pf0-1]
 gi|77385152|gb|ABA76665.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 375

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 91/327 (27%), Gaps = 68/327 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--------DYTLLRQYAKNLDADIVFLQ 72
            Q +++++WN+  L+ +  V     +     +            + +  ++   D+V LQ
Sbjct: 67  GQALKVMTWNVQYLAGKRYVFWNDLAQGDDEAPTPEDMAFSLDEVARVIRDEQPDVVLLQ 126

Query: 73  EMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           E+                   +  ++P +     +  + + +      +     A   R 
Sbjct: 127 ELDDGAKASDYQNQLKLLQERLTDLYPCSAHAFDWKADFVPDP-HIFGSVGRQLATLSRY 185

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENT 176
           +     +   P+  A     +   + A+        +G ++ V + HL      D     
Sbjct: 186 RIEHAERLQLPVQPANFISRQFQPKDALLATTLPLSDGGQLVVFNTHLDRATQPDD---- 241

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------------- 215
                  L  Q   +   + + +    P++I GDFN                        
Sbjct: 242 ------TLQAQVTAVAKVLDKHESHGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSAL 295

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
           + L +      T +    + R         +   N      +DY                
Sbjct: 296 HVLWDKYPMIPTNNEASGIDRAKWLTHYPNDPGLN-GPDRTVDYLFYSP----------- 343

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                     +    R+SDH P+   +
Sbjct: 344 KIKRVEATVRQDDTLRISDHLPVIAKF 370


>gi|269963240|ref|ZP_06177574.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832045|gb|EEZ86170.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 317

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 93/309 (30%), Gaps = 30/309 (9%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +   + N+       G         S           +   + L+ DI+ LQE+ S    
Sbjct: 7   ITFATANLFNFVAPPGAYYDFENIYSRDDWQDKLAWTKSQFEQLNPDIIGLQEVFSIEET 66

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
              F +  +  F       +       +    A+A R         ++    L    D  
Sbjct: 67  KTFFAEMGYEHFACV-DTPHIEGDYICSRPVVAVASRFPIESFEAVTFDKDTLNAFGDID 125

Query: 138 SRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLLSQQAQ 189
           +   +R+ V   +V      + V   HLKS    D       S       S      +A 
Sbjct: 126 APPFSRKPVRACVVHPIIGHLSVYVTHLKSQRPADSTTPEEASRPIARWLSTQQRGWEAA 185

Query: 190 WLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------NDSLIRFPKE 240
            L+D +  Q   + +P V+ GD N+ I     N+   +            +   ++    
Sbjct: 186 MLRDVMQRQYALNSMPTVLMGDMNQGITSTSVNNVLTEHYGDSVTDLQLNDGWELQVTPS 245

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSD 294
            +SR   + +      +DY ++ Q               Y   D         R K  SD
Sbjct: 246 LESRPATHYHFAKGNVLDYILLSQEFDAHADVSIAEVTNYQVLDAHLINPSFERDKNASD 305

Query: 295 HCPISIDYD 303
           H  +++  +
Sbjct: 306 HAFVALTVE 314


>gi|170725165|ref|YP_001759191.1| endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908]
 gi|169810512|gb|ACA85096.1| Endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908]
          Length = 355

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 94/339 (27%), Gaps = 60/339 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +++ ++N+    E            + ++       +  Y      D++  QE+ S +A+
Sbjct: 15  IKVATFNLFNFIEPPSAYYDFENIYTQEQWQKKLAWITSYLNEHQPDVIGFQEVFSPDAL 74

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RVLQQSYPLLGAKDSF 137
           A +        +++     +       +    AIA R   +    V   S          
Sbjct: 75  ATLTQACGLD-YFAVLDEPDVFDDFIYSKPVVAIASRYPIIDVHSVEADSQLAEMVGMPA 133

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQA---QW 190
           + + +R+ +   V I          +H KS        +   +      L + Q    + 
Sbjct: 134 NFSFSRKPLRATVSIPKLGPCDCYVVHFKSKRPLFDAQTEYLSGKSQVKLKTGQLLAVEA 193

Query: 191 LKDW-----------------ITQKKESLVPFVIAGDFNRKI------------NYLGNN 221
           L  W                 + ++ ++  P ++ GDFN  +              +  +
Sbjct: 194 LAQWGASIVRGSEAALLRHAMVERRVQTQYPMMLMGDFNDGLEGGVLASLTSVDTRIKPD 253

Query: 222 DDFWKTIDPNDSLIR-----------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           + F    +                  +      R      L     +DY ++        
Sbjct: 254 NVFGDVTEELQEYQLQDSYELYQKSQYSLSSQQRPATYYYLAAGSVLDYILLSCEFDAKH 313

Query: 271 IQESFSEILYNEDDI------KSRGKRLSDHCPISIDYD 303
            +       Y   D         R  + +DH P+ I   
Sbjct: 314 SRSLAEVGRYETYDRHLINPSFDRDSQSTDHAPVMITLS 352


>gi|157371595|ref|YP_001479584.1| endonuclease/exonuclease/phosphatase [Serratia proteamaculans 568]
 gi|157323359|gb|ABV42456.1| Endonuclease/exonuclease/phosphatase [Serratia proteamaculans 568]
          Length = 298

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 89/290 (30%), Gaps = 47/290 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +   A K+R+ S+NI                    SD T + +  K ++AD+V LQE+
Sbjct: 49  TYSLEQAPKIRVASFNI---------------AAGKVSDMTAIAKAIKAMNADVVALQEV 93

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                 +    +       +    +   +    +     +A   K      + YPL   +
Sbjct: 94  DKLTGRSGKLDQAEELAKLTGM-HVVFGRAIDYDGGEYGLAFLSKYPLHDSKIYPLPSGQ 152

Query: 135 DSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                   R A     ++      I +++ HL                 ++   Q + L 
Sbjct: 153 R-----EQRIAFSAQTDVPEFPAPITLINTHL-----------DTKEDPAMRLDQVRELN 196

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           D   + +      ++ GD N            W  +    + I           +     
Sbjct: 197 DRTIEMRGIK---LLFGDMNDVPGS-----VTWTELSRYWNDIMP---AAQDGRSWPAEN 245

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +I +DY     NA ++   +S +    + D        +SDH P+  + 
Sbjct: 246 AEIKVDYIF-SGNAQRW-HLDSLTVPNASGDWNGIHWPAVSDHLPVVAEL 293


>gi|120597770|ref|YP_962344.1| endonuclease/exonuclease/phosphatase [Shewanella sp. W3-18-1]
 gi|120557863|gb|ABM23790.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. W3-18-1]
          Length = 876

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 101/378 (26%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66
             + +    +R+ S+N+          +      N    T        T +      ++A
Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRTKIVSAITAMNA 514

Query: 67  DIVFLQEMGSY-----NAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +      +A+  +           N +      +      K   ++ I   
Sbjct: 515 DIVGLMEIANNGFGEKSALKNLVDALNEKQTADNAYSFIELADADKYDGKYFGSDAITVG 574

Query: 114 IAVRKKNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                    ++       +  + A  R ++    +I+ +
Sbjct: 575 MLYRAGKVTLEGAARVIETPEQHATAGSVTRTKADKTETNPGNDAYQRHSLAQTFKIHNE 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 PLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALKDVKGDLLV 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTI-------------DPNDSLIRFPK 239
                      P  +  DF+   +        W T+                  +    +
Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSERDIVTASWTTLGGKVYERQGSKIDKGYGLINLNTQ 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
                  +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGVATYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKYSGNLAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ I   +
Sbjct: 815 ENAFSASDHDPVIIALSY 832


>gi|146294097|ref|YP_001184521.1| endonuclease/exonuclease/phosphatase [Shewanella putrefaciens
           CN-32]
 gi|145565787|gb|ABP76722.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens
           CN-32]
          Length = 876

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 101/378 (26%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66
             + +    +R+ S+N+          +      N    T        T +      ++A
Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRTKIVSAITAMNA 514

Query: 67  DIVFLQEMGSY-----NAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +      +A+  +           N +      +      K   ++ I   
Sbjct: 515 DIVGLMEIANNGFGEKSALKNLVDALNEKQTADNAYSFIELADADKYDGKYFGSDAITVG 574

Query: 114 IAVRKKNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                    ++       +  + A  R ++    +I+ +
Sbjct: 575 MLYRAGKVTLEGAARVIETPEQHATAGSVTRTKADKTETNPGNDAYQRHSLAQTFKIHNE 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 PLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALKDVKGDLLV 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTI-------------DPNDSLIRFPK 239
                      P  +  DF+   +        W T+                  +    +
Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSERDIVTASWTTLGGKVYERQGSKIDKGYGLINLNTQ 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
                  +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGVATYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKYSGNLAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ I   +
Sbjct: 815 ENAFSASDHDPVIIALSY 832


>gi|319790707|ref|YP_004152347.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS]
 gi|315593170|gb|ADU34236.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS]
          Length = 262

 Score = 95.8 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 85/294 (28%), Gaps = 48/294 (16%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             A     +++++ N +                        LR   + + AD+VFLQE+ 
Sbjct: 10  AAAPAPTSLKVMTVNTHKGFTALNRKF----------ILPELRDAVRTVGADVVFLQEVL 59

Query: 76  SYNAV--AKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             ++    KV        +     +      + +       H   AV  K   V  +++ 
Sbjct: 60  GTHSRHSRKVSNWPDAPHYEFLADTMWPQFAYGRNAVYPKGHHGNAVLSKFPIVHFRNHD 119

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +  +         R  +  ++ + G+ + V  I                 + +   QQ +
Sbjct: 120 VSVSG-----PEKRGLLHCVLRLPGRTVDVHVICAHLGL-----------AEAHRQQQLE 163

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L   +  +  +  P ++AGDFN          +    +        F            
Sbjct: 164 LLCHIVRDEVPADAPLIVAGDFNDWRGRAHEVLEKGADLRE-----VFVHANGRAARTFP 218

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +    +P+D   +               +       +     LSDH P+  D D
Sbjct: 219 SRFPLLPLDRIYVRNAG-----------VHAPVVLPRRPWSHLSDHAPLVADID 261


>gi|294852226|ref|ZP_06792899.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026]
 gi|294820815|gb|EFG37814.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026]
          Length = 260

 Score = 95.8 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 86/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L+ + +    DIV LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLPGDDSDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V+ ++L +   +D+ +  Y  S        Q L++W  ++     
Sbjct: 92  --IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEE 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249
           P V+AGD+N                  +             N       +          
Sbjct: 144 PLVLAGDYNVIPEPVGARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A    I  +  + +          ++ SDH P+++
Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256

Query: 301 DY 302
             
Sbjct: 257 TL 258


>gi|23501759|ref|NP_697886.1| exodeoxyribonuclease III [Brucella suis 1330]
 gi|161618833|ref|YP_001592720.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365]
 gi|225627361|ref|ZP_03785398.1| exodeoxyribonuclease III Xth [Brucella ceti str. Cudo]
 gi|225852385|ref|YP_002732618.1| exodeoxyribonuclease III Xth [Brucella melitensis ATCC 23457]
 gi|254701637|ref|ZP_05163465.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513]
 gi|254704180|ref|ZP_05166008.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686]
 gi|254706917|ref|ZP_05168745.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10]
 gi|254709975|ref|ZP_05171786.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94]
 gi|254713975|ref|ZP_05175786.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1]
 gi|256031468|ref|ZP_05445082.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1]
 gi|256044546|ref|ZP_05447450.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1]
 gi|256060978|ref|ZP_05451136.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33]
 gi|256113411|ref|ZP_05454260.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether]
 gi|256159594|ref|ZP_05457356.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1]
 gi|256254874|ref|ZP_05460410.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94]
 gi|256264117|ref|ZP_05466649.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9]
 gi|256369301|ref|YP_003106809.1| exodeoxyribonuclease III [Brucella microti CCM 4915]
 gi|260168602|ref|ZP_05755413.1| exodeoxyribonuclease III [Brucella sp. F5/99]
 gi|261222058|ref|ZP_05936339.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94]
 gi|261314381|ref|ZP_05953578.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10]
 gi|261317523|ref|ZP_05956720.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94]
 gi|261321730|ref|ZP_05960927.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1]
 gi|261324980|ref|ZP_05964177.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33]
 gi|261752190|ref|ZP_05995899.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513]
 gi|261754849|ref|ZP_05998558.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686]
 gi|265988558|ref|ZP_06101115.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1]
 gi|265990972|ref|ZP_06103529.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994809|ref|ZP_06107366.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether]
 gi|265998023|ref|ZP_06110580.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1]
 gi|23347687|gb|AAN29801.1| exodeoxyribonuclease III [Brucella suis 1330]
 gi|161335644|gb|ABX61949.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365]
 gi|225617366|gb|EEH14411.1| exodeoxyribonuclease III Xth [Brucella ceti str. Cudo]
 gi|225640750|gb|ACO00664.1| exodeoxyribonuclease III Xth [Brucella melitensis ATCC 23457]
 gi|255999461|gb|ACU47860.1| exodeoxyribonuclease III [Brucella microti CCM 4915]
 gi|260920642|gb|EEX87295.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94]
 gi|261294420|gb|EEX97916.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1]
 gi|261296746|gb|EEY00243.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94]
 gi|261300960|gb|EEY04457.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33]
 gi|261303407|gb|EEY06904.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10]
 gi|261741943|gb|EEY29869.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513]
 gi|261744602|gb|EEY32528.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686]
 gi|262552491|gb|EEZ08481.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1]
 gi|262765922|gb|EEZ11711.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether]
 gi|263001756|gb|EEZ14331.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094335|gb|EEZ18180.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9]
 gi|264660755|gb|EEZ31016.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1]
 gi|326408891|gb|ADZ65956.1| exodeoxyribonuclease III Xth [Brucella melitensis M28]
          Length = 260

 Score = 95.8 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 87/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L+ + +    DIV LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLPGDDSDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V+ ++L +   +D+ +  Y  S        Q L++W  ++     
Sbjct: 92  --IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEE 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249
           P V+AGD+N      +           +             N       +          
Sbjct: 144 PLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A    I  +  + +          ++ SDH P+++
Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256

Query: 301 DY 302
             
Sbjct: 257 TL 258


>gi|7592805|dbj|BAA94392.1| orf0 [Actinobacillus actinomycetemcomitans]
          Length = 264

 Score = 95.8 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 73/306 (23%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +S+NIN L                 +    L +       D++ LQE+       +VFP 
Sbjct: 1   MSFNINGL----------------RARPHQLEEIINKYQPDVLGLQEI---KVSDEVFPY 41

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
           +           + +         H  +A+  K   +  +       +++  R      +
Sbjct: 42  DL-------VDHLGYHVNHFGQKGHYGVALLSKQAPLSVRKGFPTDDEEAQKR-----II 89

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
            + +E    ++ V++       F       +        +    L+ ++ Q   +  P +
Sbjct: 90  MIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQNPVI 144

Query: 207 IAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           I GD N   +                      L    ++++ +        F     +  
Sbjct: 145 IMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEEREWYQRLYAYGLEDTFRHMNPTVN 204

Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           ID+ + ++      +                   + SDH 
Sbjct: 205 DKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVDTGI-------ALDIRAMNKPSDHA 257

Query: 297 PISIDY 302
           PI  ++
Sbjct: 258 PIWAEF 263


>gi|294789096|ref|ZP_06754335.1| endonuclease/exonuclease/phosphatase family protein [Simonsiella
           muelleri ATCC 29453]
 gi|294482837|gb|EFG30525.1| endonuclease/exonuclease/phosphatase family protein [Simonsiella
           muelleri ATCC 29453]
          Length = 238

 Score = 95.8 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 82/288 (28%), Gaps = 58/288 (20%)

Query: 24  VRLVSWNIN-------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R++S+NI          S    + L        T+    + QY    D D+V LQE+  
Sbjct: 1   MRILSYNIQAAIASDSYFSYLSRLHLQIMPSPTKTTVLQNIAQYIS--DFDVVCLQEVDL 58

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +    + ++          R           +  K       + PL     
Sbjct: 59  GGFRNGYKNQVEQFLAHTPFEYYACQINRVVGKLSVHGNLILSKIPLQQVVNTPLPS--- 115

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              R   R  + + VE+   ++ V + HL                      Q + ++ +I
Sbjct: 116 ---RIKGRGMLAVAVEMPFGQMVVANAHLSLGMLD----------------QLKQIR-FI 155

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            +  +      + GDFN       +N +    +   D +       +       +   K 
Sbjct: 156 RETLKPYDNVCLMGDFNC-----PSNAEQLHLLKDFDYIHL-----NDNTATYPSWHPKQ 205

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +D+  +            F                 SDH P+ ++ +
Sbjct: 206 TLDHIFIKGCLKGRAEVAQFC---------------ASDHLPVILEIE 238


>gi|170703616|ref|ZP_02894358.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
 gi|170131473|gb|EDT00059.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
          Length = 286

 Score = 95.8 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 82/308 (26%), Gaps = 52/308 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+ WN+    + +GV            D       A+ L D D++ LQE+        
Sbjct: 1   MRLIDWNVQWGRDADGV-----------VDLARTIAAARRLGDFDVLCLQEVTRGFGVLP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                +   ++       + +              +      A+  +          L  
Sbjct: 50  GQPGPDQFTELAALLPGYMIFEAIGADLPPLEPGASRRQFGNAIATRLPAGRVLRQLLPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D+   +  R A+++ +      + ++  HL+ +            +     ++A    
Sbjct: 110 PADAGGPSMPRVALDVELTTPSGGLRIVTTHLEYYSARQ--RLAQVDALRARHREACAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           D     + +  PF         +I GDFN                D    +  +      
Sbjct: 168 DQPAPAENATGPFTATGQARDSIICGDFNSAFGSDAYQRLLEPIADAPSFVDAWVARHPG 227

Query: 244 RCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                              +  D+  +       + +                  R SDH
Sbjct: 228 HTPPPTAGVYDTVQWSEGPLACDFVFVTDTLLPRVTRCEI-----------DGDVRASDH 276

Query: 296 CPISIDYD 303
            P+ ++ +
Sbjct: 277 QPVVLELE 284


>gi|116072855|ref|ZP_01470120.1| Exodeoxyribonuclease III xth [Synechococcus sp. BL107]
 gi|116064381|gb|EAU70142.1| Exodeoxyribonuclease III xth [Synechococcus sp. BL107]
          Length = 282

 Score = 95.8 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 92/306 (30%), Gaps = 67/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ +WN+N                   S    +  + +    D++ LQE  +      +
Sbjct: 1   MRIATWNVN----------------SVRSRLDQVLSWLEQAQPDLLCLQETKVDDPLFPS 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K F    W + +                 +  +A+  +   +    Y  +G  +    A 
Sbjct: 45  KAFEAKGWRVNFH------------GQKSYNGVALVSRAP-LDDVRYGFVGELEKDPEAL 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +    + ++      + V+++++ +   L S +  Y           + LK ++    + 
Sbjct: 92  DLGEQKRVISALIDGVRVVNLYVPNGSSLTSDKYPYK------LTWLKCLKRYLEHPLKR 145

Query: 202 LVPFVIAGDFNRKINYLGNN------------DDFWKTI--DPNDSLIRFPKEKDSRCNA 247
             P  + GDFN  +     +            D   + +     + L    +  +     
Sbjct: 146 GEPLCVVGDFNIALEARDMHAPDRLSGGIMASDAERQALQMALANGLQDVFRVFEPDAGH 205

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  +              + +   D       + SDH P+
Sbjct: 206 WSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSCVIHKSVRGND-------KPSDHAPV 258

Query: 299 SIDYDF 304
           S+D D+
Sbjct: 259 SVDLDW 264


>gi|88860944|ref|ZP_01135580.1| hypothetical protein PTD2_10358 [Pseudoalteromonas tunicata D2]
 gi|88817157|gb|EAR26976.1| hypothetical protein PTD2_10358 [Pseudoalteromonas tunicata D2]
          Length = 877

 Score = 95.8 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 88/321 (27%), Gaps = 49/321 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWK------NSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             +R+ S+N+      +G           +S+         +      LDAD++ L EM 
Sbjct: 457 GDLRIASFNVLNYFNGDGQGAGFPTSRGADSLAEFERQRDKIITAILALDADVIGLMEME 516

Query: 76  S-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129
           +      +AV  +          +    ++ +      D   +A+  R   V  + Q+  
Sbjct: 517 NDGFGPQSAVQDLVNGLNAVAGENQFAFVDFNAEQVGTDQIMSAMIYRTNRVEQVGQAAF 576

Query: 130 LLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHL-------KSFCFLDSLENTYSPS 180
                  +     R  +    +   + +   V+  HL       K+        +     
Sbjct: 577 TTAEPFDYGN---RPPMMQSFKDLSHDEVFSVVVAHLRSKGSCSKATDGDVDSGDGQGCW 633

Query: 181 CSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            +        L  WI     +      VI GD N              T + N  +    
Sbjct: 634 NATRVNAVNQLTQWIATTPTNVADSDVVILGDMNAYAMEDPI-----TTYEANGFINLKK 688

Query: 239 KEKDSRC-NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------- 289
               +    +         +D+ +      + +   +   I  +E  I            
Sbjct: 689 AIHGNTYDYSYIYQGLMGSLDHALASSTMAEKVTGITDWHINADEPIILDYNLEYKTEQQ 748

Query: 290 ---------KRLSDHCPISID 301
                     R SDH PI I+
Sbjct: 749 KTSLYASNAYRASDHDPIIIE 769


>gi|260768888|ref|ZP_05877822.1| exodeoxyribonuclease III [Vibrio furnissii CIP 102972]
 gi|260616918|gb|EEX42103.1| exodeoxyribonuclease III [Vibrio furnissii CIP 102972]
 gi|315180582|gb|ADT87496.1| exodeoxyribonuclease III [Vibrio furnissii NCTC 11218]
          Length = 269

 Score = 95.8 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 80/310 (25%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  +     G          R
Sbjct: 42  -------FPLEDVEAMGYKVYFHGQKAHYGVAMLCKQTPLEVRK----GFPTDNDDHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +   G+K+ V++       F      ++        Q    L  ++        
Sbjct: 91  MIMATFLNEQGQKVTVMN-----GYFPQGDNISHETKFPYKRQFYADLMTYLNDYHTKDD 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++      + KT+        F K   
Sbjct: 146 QLIVMGDINISPIDLDIGIGEPNRQRWLKTGKCSFQPEERQWLKTLLDWGFEDTFRKLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID  +   +     ++          D      ++ S
Sbjct: 206 AVNDQFSWFDYRSKGFDDNRGLRIDVILATPSLAATCVEAGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 259 DHAPIWSVFS 268


>gi|163739595|ref|ZP_02147004.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107]
 gi|161387054|gb|EDQ11414.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107]
          Length = 268

 Score = 95.8 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 89/306 (29%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L ++      D+V LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------IKARINALPEWLDEAQPDVVVLQEIKS---VDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +           ++           +A+  K      +        D  +R    
Sbjct: 42  FPRELF-------EDRGYNVETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +E  V +  + I +  ++L +          +       +      + L+        
Sbjct: 92  --IEATV-VGKQAIRICGLYLPNGNPVELDAEGQPVEGGKYAYKLAWMERLRQRAKDLLA 148

Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             +P ++AGD+N                   +   +   ++ I        F        
Sbjct: 149 EEMPALMAGDYNIIPQAEDAKTPEAWKDDALHRPESRAAFQRIMALGFTEAFRARHQGPG 208

Query: 246 NANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           + +            N I ID+F++   A   L            D       + SDH P
Sbjct: 209 HYSFWDYQAGAWNRNNGIRIDHFLLSPQAADLLRDCQI-------DKDVRGRDKPSDHVP 261

Query: 298 ISIDYD 303
           + +D D
Sbjct: 262 VWVDLD 267


>gi|83591541|ref|YP_425293.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
           11170]
 gi|83574455|gb|ABC21006.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
           11170]
          Length = 264

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 90/304 (29%), Gaps = 60/304 (19%)

Query: 13  LVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           LVP + S ++       +R+V WN++     +              D + + +    L  
Sbjct: 9   LVPHSTSTSEGFAGSIALRVVCWNLHGCVGTDR-----------RRDPSRVAKALAVLSP 57

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V LQE+       +     T  I  +T     HS     +      A+  +   V   
Sbjct: 58  DVVGLQEVDLRRHPGEAEDPLT-LIARATGMRAVHSPTLKRDGGAYGNAILSRWPVVAAL 116

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
              L            RRA++  +E     + V+  HL                      
Sbjct: 117 PLDLSVPGC-----EPRRAMDATLEHPAGPLRVMVTHLGLG-------------RKERRW 158

Query: 187 QAQWLKDWITQKK------ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           Q   L + +++        ++  P ++ GDFN  +            +          + 
Sbjct: 159 QVGRLGERLSRPLAGADGRDAHHPLILMGDFNEWL---PWGQTAVAGLKTWFDADCSRR- 214

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                    +    + +D  ++  +              +         +R SDH P+ +
Sbjct: 215 ------TFPSWLPILRLDRLLVRPSPR--------RLTPWPTLPQGQGIRRASDHLPLVV 260

Query: 301 DYDF 304
           D +F
Sbjct: 261 DLEF 264


>gi|253997905|ref|YP_003049968.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4]
 gi|253984584|gb|ACT49441.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4]
          Length = 255

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 84/303 (27%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L+                     +  +      D++ LQE    ++    
Sbjct: 1   MKLATWNVNSLN----------------VRLPHVLDWCTANQPDVLCLQETKQEDS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y     I ++   S    +  +A+  ++V                     +
Sbjct: 41  ------KFPYEALTAIGYNAIHSGQKTYNGVAILSRHVLE------HPSYGIPDFADEQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V    K I ++  ++ +   +DS +  Y             L   +  +  +  
Sbjct: 89  RLIAATV----KGIRIVCAYIPNGQSVDSDKYQYK------LNWLASLTTHLQAELAAHP 138

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
              + GD+N        +D      + +                L    +  +    +  
Sbjct: 139 KLALLGDYNIAPEDRDVHDPAAWLGQVLVSEPERTAFQGLVGLGLHDTFRLFEQPEASFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D    + +R SDH P+ +
Sbjct: 199 WWDYRMAGFRRNLGLRIDHILVSTPLLAACKASWI-------DKAPRKLERPSDHTPVVL 251

Query: 301 DYD 303
           +  
Sbjct: 252 ELS 254


>gi|210634817|ref|ZP_03298323.1| hypothetical protein COLSTE_02250 [Collinsella stercoris DSM 13279]
 gi|210158621|gb|EEA89592.1| hypothetical protein COLSTE_02250 [Collinsella stercoris DSM 13279]
          Length = 280

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 85/314 (27%), Gaps = 65/314 (20%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T + ++ ++L SWN+N L                             LDADI+ LQE   
Sbjct: 2   TNTASRTLKLASWNVNGLRAVLKKDPSF-------------TDIVSELDADILGLQETKL 48

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                ++     +   +S      +S                     ++ +  +L A  +
Sbjct: 49  QEGQVEI-DLPGYHQVWSYAERKGYSGTAVFTR---------DEPLSVRHADAVLAAGRA 98

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKD 193
                ++  +  +    G+   V  +  + F F+D                       + 
Sbjct: 99  AGLTDDQLELVAVAATEGR---VCALEFERFWFVDVYTPNAQGELARLDTRMAWDDAYRA 155

Query: 194 WITQKKES-LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRF 237
           ++   ++    P V  GDFN   N                       +  +        F
Sbjct: 156 FLLSLEDETGKPVVTCGDFNVAHNEIDLKNPKSNRGNAGFSDEERSKFVELLDAGYTDTF 215

Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                    A      +           IDYF++  +    +        ++        
Sbjct: 216 RAANPDLEGAYSWWSYRFNARKNNAGWRIDYFLVSDSIADRVRATGIRSDIF-------- 267

Query: 289 GKRLSDHCPISIDY 302
               SDHCP++++ 
Sbjct: 268 ---GSDHCPVTLEI 278


>gi|332141071|ref|YP_004426809.1| exodeoxyribonuclease III [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551093|gb|AEA97811.1| exodeoxyribonuclease III [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 269

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 80/311 (25%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN                   +    L+        DI+ LQE  + +     
Sbjct: 1   MKVISFNING----------------IRARLHQLQAVIDAHQPDIIGLQEIKVHNEQFPV 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A   K   +       +G       A 
Sbjct: 45  EAVEAMGYHVYFH------------GQKSHYGVAFLAKKEPLSVT----MGFPTDEEDAQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    +  G+ + +L+       F       +        +  + L  ++ +    
Sbjct: 89  RRMIILKTTDDAGQPVTILN-----GYFPQGENEKHETKYPAKRKFYKDLMTYLDENHTP 143

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
               ++ GD N                          L    ++  T+        F   
Sbjct: 144 EDNVIVMGDVNISHTDLDIGIGEENRKRWLRTGKCSFLPEEREWLNTLFSWGFEDSFRTL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                        +           ID  +  ++ +  L+           D      ++
Sbjct: 204 NPETNERFSWFDYRSKGFNDNRGLRIDLILATKSLHSTLVDAGI-------DYELRGIEK 256

Query: 292 LSDHCPISIDY 302
            SDH PI  +Y
Sbjct: 257 PSDHAPIWAEY 267


>gi|255535973|ref|YP_003096344.1| hypothetical protein FIC_01839 [Flavobacteriaceae bacterium
           3519-10]
 gi|255342169|gb|ACU08282.1| hypothetical protein FIC_01839 [Flavobacteriaceae bacterium
           3519-10]
          Length = 314

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/315 (10%), Positives = 87/315 (27%), Gaps = 49/315 (15%)

Query: 26  LVSWNINTLSEQEGVS---------LWKNSVKR-TTSDYTLLRQYAKNLD------ADIV 69
           +  +N+  L   +              +N  +R      + +    + +         ++
Sbjct: 10  IAFYNVENLLMPDPPPVHKTDPSASGLRNWDERKYRIKLSKIAHVFQLIADQEGVTPLLI 69

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--- 126
            L E+     + ++     +         I H        I  A+   +  ++++     
Sbjct: 70  GLCEVQGREPLEELLALTPF-----PNHQIVHYGSSDLRGIDVALLYDRTKLQLISSQPL 124

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           S+              R  +      +G+ + V  +HL S    D        + +L + 
Sbjct: 125 SFNFQTTDGESQPDPTRDILHCRFHCDGRNLNVFVLHLPSKREKDV-------NKALRTN 177

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             + L   +T+   +    +I GDFN   +        +           F +   +   
Sbjct: 178 ILEQLHQVVTEYIANGEAVIICGDFNANPDEDTVKKLLYDKDFMKVLHNPFGELLSANKF 237

Query: 247 ANKNLRNKIPIDYFVMDQNAYK------------------FLIQESFSEILYNEDDIKSR 288
           +  +  N +  D  ++    Y+                   +     +            
Sbjct: 238 STYHRANGLLFDQIILSDGFYRTGFPLKFKTAKIFSYEKLRVRDRKLAARPAKTFAGTRY 297

Query: 289 GKRLSDHCPISIDYD 303
               SDH P+  +++
Sbjct: 298 LGGYSDHFPVITEFE 312


>gi|167856041|ref|ZP_02478785.1| exodeoxyribonuclease III [Haemophilus parasuis 29755]
 gi|219870568|ref|YP_002474943.1| exonuclease III [Haemophilus parasuis SH0165]
 gi|167852836|gb|EDS24106.1| exodeoxyribonuclease III [Haemophilus parasuis 29755]
 gi|219690772|gb|ACL31995.1| exonuclease III [Haemophilus parasuis SH0165]
          Length = 267

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 82/311 (26%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +   +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLEALIEKHQPDVIGLQEIKVADEDFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     + +F+                 H  +A+  KN  +  +        D+  R  
Sbjct: 45  DLVNHLGYHVFHH------------GQKGHYGVALLTKNQPLAVRKGFPTDNADAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + VL+       F      ++        +    L+ ++  + + 
Sbjct: 91  ---MIMADLETPFGTLTVLN-----GYFPQGENRSHETKFPAKEKFYADLQRYLETELKP 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P VI GD N                          L    ++   +     +  F   
Sbjct: 143 ENPIVIMGDMNISPTDLDIGLGEVNRKRWLRDGKCSFLPEEREWLGRLHGYGLVDTFRAM 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID  +      +  ++          D       +
Sbjct: 203 NPTAEDKFSWFDYRSKGFDDNRGLRIDLVLASTPLAERCVETGI-------DLEIRAMDK 255

Query: 292 LSDHCPISIDY 302
            SDH P+   +
Sbjct: 256 PSDHAPVWAVF 266


>gi|259144689|emb|CAY77630.1| Ccr4p [Saccharomyces cerevisiae EC1118]
          Length = 841

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L++   + D+D++ LQE+ S 
Sbjct: 505 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 564

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       I  ++   +++ +       
Sbjct: 565 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 624

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 625 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 684

Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235
             L D +    +              P +I GDFN  IN       +     I    +  
Sbjct: 685 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 744

Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
            F    +                      N        IDY            +      
Sbjct: 745 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 804

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH P+   ++F
Sbjct: 805 EYVSKFIGFPNDKFPSDHIPLLARFEF 831


>gi|297158932|gb|ADI08644.1| putative endonuclease/exonuclease/phosphatase family protein
           [Streptomyces bingchenggensis BCW-1]
          Length = 808

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/328 (11%), Positives = 85/328 (25%), Gaps = 68/328 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A +V + ++N+  L   +  S +    +    +             DIV L+E+   N  
Sbjct: 502 ANQVSVATYNVENLDPTDPQSKFDRLAEGVVKNLAA---------PDIVSLEEIQDNNGA 552

Query: 81  A------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              K     T+    S + + +    +   +I        + V 
Sbjct: 553 KDDGTVAADKTIAQFIDAIKAAGGPTYDW-RSVDPVNDADGGEPGGNIRNVFLFNPQRVS 611

Query: 123 VLQQSY----------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
            + +                        P      S +   +R+ +       G+K++V+
Sbjct: 612 FVDRPGGDATTAVEAVRDGNKGARLSVSPGRINPTSDAWKSSRKPLVGEFTFRGEKLFVV 671

Query: 161 DIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRK 214
             H  S      +   + P    S +  + QA+ +  +++           V+ GD N  
Sbjct: 672 GNHFNSKGGDQPVHGAFQPPTLGSETQRTAQAKEVNTFVSGLLAKDRQARVVVLGDMNDF 731

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                         +                 +     N   +D+ ++            
Sbjct: 732 QFS----KPLATLTEGGVLTDLINTLPAGERYSYVYDGNAQTLDHILVSPTIK------- 780

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                           + SDH P  + +
Sbjct: 781 -KPEYDVVHINAEFSDQSSDHDPQVVRF 807


>gi|294633236|ref|ZP_06711795.1| secreted protein [Streptomyces sp. e14]
 gi|292831017|gb|EFF89367.1| secreted protein [Streptomyces sp. e14]
          Length = 299

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 87/291 (29%), Gaps = 61/291 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
            +R+ ++NI+  + ++ V            D     +  ++L AD++ LQE+  +     
Sbjct: 52  PLRVATYNIHAGAGEDNVF-----------DLDRTARAIRDLHADVIGLQEVDVHWGDRS 100

Query: 80  -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  ++  +    +F++    +  +   +       +AV  +   V  +++ +    
Sbjct: 101 GFTDEARELARRLRMRVFFAPIYDLPPAAGHT-QRQRFGVAVLSRLPVVSAENHEITRLS 159

Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                     A    E+ V  +G  + V   HL            Y P  S+   Q   +
Sbjct: 160 TQSPDPVPEPAPGFAEVTVRAHGTLVHVYSTHL-----------DYRPDPSVRRTQVDDM 208

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              + + +    P V+ GDFN + +        W  +                       
Sbjct: 209 LGVLAEDRG---PKVLVGDFNAEPDAPELTR-LWGPLADAVPEAGDTYPALDPVK----- 259

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID      +A                   ++     SDH P+  D 
Sbjct: 260 ----RIDVIATSPDA--------------VVTRARTVDTAASDHRPVVADL 292


>gi|261210504|ref|ZP_05924797.1| exodeoxyribonuclease III [Vibrio sp. RC341]
 gi|260840289|gb|EEX66860.1| exodeoxyribonuclease III [Vibrio sp. RC341]
          Length = 268

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 83/311 (26%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L+        D++ LQE  +       
Sbjct: 1   MKIISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDDAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A+  K   +      + G         
Sbjct: 45  EEVEAMGYQVYFH------------GQKAHYGVAILCKQTPLEV----IKGFPTDNEEHQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    +  G K  VL+       F       +        Q  + L  ++ + + +
Sbjct: 89  KRMIMATFADQEGNKTTVLN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
               V+ GD N                        ++     ++ +T+     +  F + 
Sbjct: 144 TERLVVMGDINISPIDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID  +   +  +   +          D       +
Sbjct: 204 HPNVNDQFSWFDYRSRGFEDNRGLRIDVILATPSLAETCQEAGI-------DYELRGIDK 256

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 257 PSDHAPIWATF 267


>gi|254460874|ref|ZP_05074290.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2083]
 gi|206677463|gb|EDZ41950.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium HTCC2083]
          Length = 259

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ ++NIN                   +    L ++ K+   D+  LQE+         
Sbjct: 1   MKIATFNING----------------IKARIAALPEWLKDAQPDVALLQEIKSVDEGFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F    + +                      +A+  K      +        D  +R  
Sbjct: 45  ELFEDMGYNV------------ETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E  V +  + I V  ++L +       +  Y  +          L+         
Sbjct: 92  ----IEATV-VGKQAIRVCGLYLPNGNPAPGPKYDYKLA------WMARLQARAEALLAE 140

Query: 202 LVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             PF++AGD+N                       +   ++ +        F        +
Sbjct: 141 ETPFLMAGDYNIIPQDEDARHPEVWQEDALARPESRAAYRRLVNLGLTEAFRARVHGPEH 200

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +                ID+F++       L+           D     G++ SDH P+
Sbjct: 201 YSFWDYQAGAWNKDDGIRIDHFLLSPAVADILVDCQI-------DMHVRAGEKPSDHVPV 253

Query: 299 SIDY 302
            ++ 
Sbjct: 254 WVEL 257


>gi|153005502|ref|YP_001379827.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
 gi|152029075|gb|ABS26843.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
          Length = 289

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 92/285 (32%), Gaps = 39/285 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +R+ +WN++ L + E   L         S +   +    + +    +DAD+V LQE+ + 
Sbjct: 35  LRVATWNVHDLFDAEDRLLPPGAEDALPSPEAVKAKLDAVAEVLLRVDADVVLLQEVETL 94

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              + +  +  +             + +    I  A+  R    R +  +  L G   + 
Sbjct: 95  ALASALAARAGY-------GEARLVEGNDPRGIDVAVLSRPSIHRYVSHAAELDGDGRTL 147

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  VE+ + + G++I ++  HL S    D        +       A         
Sbjct: 148 W---PRDCVEVHLGVGGRRIAIVASHLSSRLSDDGTRRAAQAARMRAIADAI-------S 197

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           + +     ++ GD N                   D     P        ++ +      +
Sbjct: 198 EADPEALVLVGGDLNDPPTAPALAPL------AGDGAHVDPLPSWETTWSSGSPA--ERL 249

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D  ++ + +   +++              +   R SDH P+ +D 
Sbjct: 250 DALLVGRASAAAIVRAVVE--------RGTDVARASDHQPVVLDL 286


>gi|146277242|ref|YP_001167401.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025]
 gi|145555483|gb|ABP70096.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17025]
          Length = 259

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 85/302 (28%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    +  + +    D+V LQE+ S +     
Sbjct: 1   MKIATYNING----------------IKARIEAVLAWLEAASPDVVLLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +                   +A+  +             A+D  +R    
Sbjct: 41  ------TFPRAVFEDRGWHLETHGQKGFNGVAILSRLPLEDVVRGLPGDAEDVQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V +  + + V  ++L +       +  Y  +     +Q         +  E+  
Sbjct: 92  --IEATV-VGQRAVRVCGLYLPNGNPAPGPKYDYKLAWIARMKQRAA------ELLETED 142

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                       +   ++ I        F        + +
Sbjct: 143 PVVLAGDYNVIPQAEDAARPEAWVTDALFLPESRAAFRRILNLGYTEAFRARSFGPGHYS 202

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ ++   A   +            D     G++ SDH P+ +
Sbjct: 203 FWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDV-------RIDREVRAGEKPSDHVPVWV 255

Query: 301 DY 302
           + 
Sbjct: 256 EL 257


>gi|88705337|ref|ZP_01103048.1| protein containing Endonuclease/exonuclease/phos phatase domain
           [Congregibacter litoralis KT71]
 gi|88700427|gb|EAQ97535.1| protein containing Endonuclease/exonuclease/phos phatase domain
           [Congregibacter litoralis KT71]
          Length = 1037

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 79/325 (24%), Gaps = 41/325 (12%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWK------------NSVKRTTSDYTLLRQYAK 62
               +V   +++ S+N+        +                +S          +     
Sbjct: 664 TAPEAVGGSLKVASFNVLNYFTTLDLGQDTCGPSKNLECRGADSADELARQQEKIVAALA 723

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV 121
           +LDADIV L E+ + + V+      +     S              D I  A       V
Sbjct: 724 DLDADIVGLIEIENTDGVSAEATLASALSAVSGRSYAAVQTGTVGTDAIKVAFIYDTATV 783

Query: 122 RVLQQSYPLLGA---KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENT 176
           +++     L           R  NR A+            + V   H KS        + 
Sbjct: 784 QLVGGFAVLEEGFLDPLGIGRDLNRAALAQTFREAAGNGIVTVAVNHFKSKGSGCGDGDD 843

Query: 177 ---YSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                   +  +  A  L  W+            +I GD N               +   
Sbjct: 844 DPVQGSCNATRTAAAGALAAWLDSDPTGSGDDDMLILGDLNSYAKEDPI-----TLLVNA 898

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
                                    +DY + +      +   +   I  +E D       
Sbjct: 899 GYTDLAAYFLGDSAYGYVFSGRWGTLDYAMANPALLAQVAGVTEWHINADEPDAIDYDTR 958

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +  +
Sbjct: 959 FNPQAWFAGDAFRSSDHDPVLVGLN 983


>gi|115360279|ref|YP_777417.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
 gi|115285567|gb|ABI91083.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
          Length = 627

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/319 (13%), Positives = 86/319 (26%), Gaps = 48/319 (15%)

Query: 19  SVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVF 70
             A  VR+ S+N+ N  +       + +   R              L    + L AD++ 
Sbjct: 313 PQAD-VRVASFNVFNYFNGDGAGGGFGDPSGRGAKTPAAFARQEAKLVAALRALRADVIG 371

Query: 71  LQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           L E+ +  +  A    +    +      +   + R   + I  A+    + +       P
Sbjct: 372 LMEIANNGHGPASAVQRLAARLGGGWRAVDPGTARLGRDAIAVALLYDSRTIE------P 425

Query: 130 LLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSC------ 181
           +  A        NR  +          +   V   HLKS     +       S       
Sbjct: 426 VGRAATVALDGRNRPPLAQTFRRVDGTRAFTVAVNHLKSKNCPHATGPDLDQSDGQGCWN 485

Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +  ++ A+ +  W+       +    ++ GD N             + ++         +
Sbjct: 486 ATRTRAAERVAGWLATSPTGAAADGVLLIGDLNSYAKEDP-----LRALESRGYTNLVAR 540

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED---------------- 283
              +             +D+ +        +       I  +E                 
Sbjct: 541 FVGNAGYTYVFHGEAGNLDHALATPPLAARVKAVHTWHINADEPIALQAVPDYKTPAQQA 600

Query: 284 -DIKSRGKRLSDHCPISID 301
                   R SDH P+ ID
Sbjct: 601 AYYAPDAYRSSDHDPVVID 619


>gi|299066602|emb|CBJ37792.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum CMR15]
          Length = 269

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 94/303 (31%), Gaps = 61/303 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L  +  +      +    +D T +         D++ LQE+         
Sbjct: 1   MRVATWNVNSL--KVRLPHVLQWLGEREADATPI---------DLLCLQELK-------- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P + +    +      ++   +    +  +A+  +   + +    +            +
Sbjct: 42  LPDDRYP--LAELEAAGYASLFTGQKTYNGVAILARKAAMPEGRDVVRNIPGFAD--EQQ 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R V    E+ G  + V+  +  +   LDS +  Y        +    L+ W+  +  +  
Sbjct: 98  RVVAATYEVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQAWLQAEMAAHP 151

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GDFN   +                       ++ ++    +  F   +       
Sbjct: 152 RLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAFRMFEQED-KLF 210

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID+ ++  +  +              D +    ++ SDH P+ 
Sbjct: 211 SWWDYRLFAFRRNAGLRIDHILLSPDLARLCESCHI-------DRVPRGWEQPSDHTPVV 263

Query: 300 IDY 302
              
Sbjct: 264 AAL 266


>gi|170763963|ref|ZP_02636372.2| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|170711168|gb|EDT23350.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens B str. ATCC 3626]
          Length = 262

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 95/296 (32%), Gaps = 55/296 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+    + +  + W       +     + +  K+   DI+  QE   +      
Sbjct: 4   LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137
              + +         +   +  +  D   AI   K    VL+         P +     F
Sbjct: 57  DLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109

Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           + +  R   +L +  +I+G KI + + HL         E        ++ ++ +      
Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--------LIRFPKEKDSRCNA 247
                   P++I GDFN  +      D+ +  I   ++                    + 
Sbjct: 159 KNYSIEKTPYIIMGDFNCYL-----EDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHY 213

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            K       IDY +  +          +     N DD K  G   SDH P+  + +
Sbjct: 214 FKGGYEGKIIDYILYSKE---------YEIKSLNIDDRKINGGYPSDHYPVICELE 260


>gi|127511624|ref|YP_001092821.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4]
 gi|126636919|gb|ABO22562.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4]
          Length = 357

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 47/351 (13%), Positives = 104/351 (29%), Gaps = 66/351 (18%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           T++ A ++R+ S+N+             N   +  +       +R+Y  + D  ++  QE
Sbjct: 4   TSAAASQIRIASFNLYNFIAPPDAYYDFNNIYTQAQWQQKCDWIRRYLASHDPCVIGFQE 63

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + S  A+  +  +  +  F + +R               A+A +   +           A
Sbjct: 64  VFSIEALQALLAEAGYPYFVTVDRPEVSDD-FIYRHPVLALASKYPILSYEPCDIDQTVA 122

Query: 134 K---DSFSRAGNRRAVELLVEING-KKIWVLDIHLKSF--------------------CF 169
                +     +R  +   + +          +H KS                       
Sbjct: 123 SVMGIAPGFQYSRLPLRATIALPHLGPCDCYLVHFKSKRAQFDPELAVTPDSGSEPAASQ 182

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWI-------------TQKKESLVPFVIAGDFNRKIN 216
            DSL    S +   +   A+W    I              ++ ++  P ++ GDFN  + 
Sbjct: 183 SDSLTIEKSEALFAIEAAAKWASSLIRGSEASLLRVAIARRRIDTRYPVILMGDFNDSLA 242

Query: 217 --------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNKIPI 257
                              ++ ++     D+ +   + + S  +      + +L     I
Sbjct: 243 GGVLSALVSEDSRLLGVLGEEAFQDYRLQDAYLLHERSEYSPTSVARAPTHYHLNRGEVI 302

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCPISIDY 302
           DY ++         Q       Y+  D         R    +DH P+ +  
Sbjct: 303 DYILLSNEFDPHNHQCLAQVSQYHTYDSHLINPQYDRDSHSTDHAPVMVSL 353


>gi|251811372|ref|ZP_04825845.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|251805121|gb|EES57778.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis
           BCM-HMP0060]
          Length = 334

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ + N+  L      +++ N  +   +D      Y +  + D+V L E+    A  
Sbjct: 42  DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 95

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133
           ++  +      Y T  +   ++   N              + +  K   V Q+ + +   
Sbjct: 96  RLSTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 154

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 AGN+    + +  NGK   ++  HL++    +           +   Q   +K 
Sbjct: 155 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMSEIKQ 210

Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +I  +      P  I GD N  I            ++ +              ++N   +
Sbjct: 211 FIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 269

Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                     +DY ++D++  +     + +  + + +       +       SDH P+S
Sbjct: 270 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 328


>gi|144897972|emb|CAM74836.1| Endonuclease/exonuclease/phosphatase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 262

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 77/306 (25%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+V+WNIN                     + LLRQ  + L  D++ LQE+     V ++
Sbjct: 1   MRVVTWNIN----------------SIRLRFDLLRQVVERLTPDVICLQEI---KVVDEL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +                       +  +A+  K       +    G  D       R
Sbjct: 42  FPADECRSL------GFPHIAFHGMKGYNGVAILSKRPIRETMTPSWCGRDD-------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   ++            L      D  +   +   +      + + DW     +   
Sbjct: 89  RHLVAKLDEAE------IHCLYVPAGGDIPDPQQNDKFAHKLDFLRQVTDWYAGTYKPGD 142

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N                   +     D   +       +    +        
Sbjct: 143 RVILTGDLNVAPLETDVWSHKQLLKVVSHTPIEVDLLDRMQASLGWVDAMRRFIPPSERL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +       L                    + SDH P
Sbjct: 203 YTWWSYRSPDWEKNDRGRRLDHVWVTPALGDTLRSVEVLREC-------RSWTQPSDHVP 255

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 256 VLVELD 261


>gi|254229170|ref|ZP_04922589.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25]
 gi|262395520|ref|YP_003287373.1| hypothetical protein VEA_000220 [Vibrio sp. Ex25]
 gi|151938255|gb|EDN57094.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25]
 gi|262339114|gb|ACY52908.1| hypothetical protein VEA_000220 [Vibrio sp. Ex25]
          Length = 317

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 103/312 (33%), Gaps = 30/312 (9%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           S   ++  V+ N+                 S+++        ++  + L+AD++ LQE+ 
Sbjct: 2   SQPSRITFVTANLFNFVAPPDAYYDFENIYSLEQWQDKLAWTQRQIEKLEADVIGLQEVF 61

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLG 132
           S       F    +  +++T    +       +    AIA R    +V    +    L  
Sbjct: 62  SIEKTQAFFSTIGYP-YFATVDTPHVEDEYIYSSPVVAIASRFPIEKVQAVEFDLATLEP 120

Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENT-------YSPSCSLL 184
              S +   +R+ +   ++      I V   HLKS    DS +            S    
Sbjct: 121 FGISVAPEFSRKPIYAQVIHPVLGHIAVYVTHLKSQRPADSEQPETSSTIIGRWLSTQQR 180

Query: 185 SQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------NDSLI 235
             +A  L+D +  + ++  +P V+ GD N+ I     N                 +   +
Sbjct: 181 GWEAAMLRDAMQKRYRKEPMPTVLMGDMNQPITPTSVNSALVANTGDSVTELQLKDGWSL 240

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289
           +    KD R   + +      +DY ++ Q             + Y   +         R 
Sbjct: 241 QSDALKDERPATHYHFSTGNVLDYILLSQEFDTLSDISVAEVVDYQVSNQHLINPIYDRD 300

Query: 290 KRLSDHCPISID 301
           K  SDH  +++ 
Sbjct: 301 KNASDHAFVALT 312


>gi|313199970|ref|YP_004038628.1| exodeoxyribonuclease III xth [Methylovorus sp. MP688]
 gi|312439286|gb|ADQ83392.1| exodeoxyribonuclease III Xth [Methylovorus sp. MP688]
          Length = 255

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 84/303 (27%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L+                     +  +      D++ LQE    ++    
Sbjct: 1   MKLATWNVNSLN----------------VRLPHVLDWCTANQPDVLCLQETKQEDS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y     I ++   S    +  +A+  ++V                     +
Sbjct: 41  ------KFPYEALTAIGYNAIHSGQKTYNGVAILSRHVLE------HPSYGIPDFADEQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V    K I ++  ++ +   +DS +  Y             L   +  +  +  
Sbjct: 89  RLIAATV----KGIRIVCAYIPNGQSVDSDKYQYK------LNWLASLTTHLQAELAAHP 138

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
              + GD+N        +D      + +                L    +  +    +  
Sbjct: 139 KLALLGDYNIAPEDRDVHDPAAWLGQVLVSEPERNAFQGLVGLGLHDTFRLFEQPEASFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D    + +R SDH P+ +
Sbjct: 199 WWDYRMAGFRRNLGLRIDHILVSTPLLAACKASWI-------DKAPRKLERPSDHTPVVL 251

Query: 301 DYD 303
           +  
Sbjct: 252 ELS 254


>gi|54296672|ref|YP_123041.1| hypothetical protein lpp0703 [Legionella pneumophila str. Paris]
 gi|53750457|emb|CAH11851.1| hypothetical protein lpp0703 [Legionella pneumophila str. Paris]
          Length = 256

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 84/305 (27%), Gaps = 76/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +L SWN+N+L                      + Q+ ++   D++ +QE          
Sbjct: 2   FKLASWNVNSL----------------KVRLEQVLQWLESSQVDLLAMQET--------- 36

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     ++     +    S    +  +A+  +           +           R
Sbjct: 37  -KLTDENFPVASFTDKGYHVIFSGQKTYNGVAIISRYPMT------DIQTDIPELEDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V    K I ++++++ +   L S +  Y             +  +I  +     
Sbjct: 90  RILAATV----KGIRLINLYVPNGGELTSDKYQYKLD------WLNKVTRFIENQLSIYS 139

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
              + GDFN        +D                 F K ++    L    +       A
Sbjct: 140 KVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPAERQAFMKILELG--LHDSFRNFAQEEKA 197

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++         Q          D    + +R SDH P+
Sbjct: 198 FSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQS-------KIDKEPRKAERPSDHAPV 250

Query: 299 SIDYD 303
            ++ +
Sbjct: 251 WVELE 255


>gi|21224654|ref|NP_630433.1| exonuclease [Streptomyces coelicolor A3(2)]
 gi|3367747|emb|CAA20072.1| putative exonuclease [Streptomyces coelicolor A3(2)]
          Length = 259

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 79/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ LQE     A    
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEAKVAEA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   R   +            +AV  +          L G          R
Sbjct: 41  ------QFPFDALREAGYEAAVHATGRWNGVAVLSRVGLEDVVKG-LPGDPGYEGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +D     Y        Q  + L+  +        
Sbjct: 94  A-----ISATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALRAAVEGDAAGGR 142

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N         D                   ++         P+      +  
Sbjct: 143 PFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAALASLRGAGLSDVVPRPLKYD-HPF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    ++   K +            D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|149199457|ref|ZP_01876492.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera
           araneosa HTCC2155]
 gi|149137392|gb|EDM25810.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera
           araneosa HTCC2155]
          Length = 590

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 90/322 (27%), Gaps = 58/322 (18%)

Query: 5   YVLALVFFLVP--CTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           ++L  +   +   C    A     +V+ +S+NI     ++  + W            L+ 
Sbjct: 10  FILVTINLALAQLCAQESADSQVLEVKAMSFNIRNSYARDKENSWDLRK-------ELVY 62

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +  ++   D++ LQE               +                     ++A+   K
Sbjct: 63  KVIQDYAPDVLGLQEANHEQLGELKIQFPNYRHIGVASDGGT-------KGQYSAVLYLK 115

Query: 119 KNVRVLQQSYPLLGAKDS-----FSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171
             VRVL      +          +  A  R      ++     K++ V + HL       
Sbjct: 116 SKVRVLDSGDFWISETPEKVSKSWRSAHRRICTWARLQELKTSKELVVYNTHLDDGSG-- 173

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------D 222
                         + A+ +   +  +K     F++ GDFN                  +
Sbjct: 174 ----------KAREKGAEMIMKHLHGQKLKDA-FIVMGDFNAAEESKAIAQVKGTGAFVN 222

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
             +        ++    +     +      +   IDY  +          ++   +    
Sbjct: 223 AVYPKAVDPFRVLNPEAKNVGTYHGFSGKDSGAKIDYIFV---------PKNAQVLAAEI 273

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
                 G+  SDH P++    F
Sbjct: 274 LKTNHNGRYPSDHFPVTARVSF 295


>gi|13471192|ref|NP_102761.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099]
 gi|14021936|dbj|BAB48547.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099]
          Length = 264

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 86/302 (28%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN                   +    L  +      DIV LQE+ + +     
Sbjct: 1   MKIVTWNING----------------VRARIGNLTHWLTESAPDIVCLQEIKTVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + ++   +       +A+  K               D  +R    
Sbjct: 41  ------QFPRAEIEALGYNVETNGQKGFNGVALLSKLRFDEVIRGLPGDDTDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V  ++L +   +D                   L+ W  ++ +   
Sbjct: 92  --IEGVFSTDKGALRVASLYLPNGNPIDDE-----KKFPYKLNWMARLERWAEERLKLEE 144

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANK 249
             V+AGD+N      +     +     +    +   F +  +              +   
Sbjct: 145 ALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQAFRRLLNLGFTEAVRAVTDAPDTYT 204

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A       S  + +          ++ SDH P++I
Sbjct: 205 FWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIEKHV-------RAWEKPSDHVPVAI 257

Query: 301 DY 302
           D 
Sbjct: 258 DL 259


>gi|323338887|gb|EGA80101.1| Ccr4p [Saccharomyces cerevisiae Vin13]
          Length = 837

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L++   + D+D++ LQE+ S 
Sbjct: 501 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 560

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       I  ++   +++ +       
Sbjct: 561 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 620

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 621 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 680

Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235
             L D +    +              P +I GDFN  IN       +     I    +  
Sbjct: 681 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 740

Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
            F    +                      N        IDY            +      
Sbjct: 741 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 800

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH P+   ++F
Sbjct: 801 EYVSKFIGFPNDKFPSDHIPLLARFEF 827


>gi|311694667|gb|ADP97540.1| exonuclease III [marine bacterium HP15]
          Length = 270

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 69/285 (24%), Gaps = 59/285 (20%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +    L      L  D + LQE    +                  R + +         
Sbjct: 12  RTRLHQLEAVIDTLAPDFIGLQETKVQDD----------DFPVEAIRDLGYHVHFHGQKT 61

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           H  +A+  K              +DS      RR +     +NG+K+ V++       F 
Sbjct: 62  HYGVALLSKAEPEEVIKGYPWDGEDS-----QRRLITGHFTVNGEKLTVIN-----GYFP 111

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------ 218
                 +        +    L  ++ + K++    V+ GD N                  
Sbjct: 112 QGESRDHPVKFPAKEKFYGDLMRYLDELKKAGGHVVVMGDMNISPTDKDIGIGADNAKRW 171

Query: 219 ---------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PID 258
                        ++   ++       F        +       +             ID
Sbjct: 172 LRTGKCSFLPEEREWLGQVESRGYTDVFRHLHPDEADTFSWFDYRSKGFERDPKRGLRID 231

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +   +      +                 +R SDHCP+   ++
Sbjct: 232 LIMASDSLLPKARKAGV-------SYDIRAMERPSDHCPVWASFE 269


>gi|307325474|ref|ZP_07604676.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
 gi|306888943|gb|EFN19927.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
          Length = 286

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 79/290 (27%), Gaps = 54/290 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  +++R+ ++NI+  +    V            D   + +  ++L  D++ LQE+  Y 
Sbjct: 36  TDPRRLRVATFNIHHGAGPADVL-----------DLERVARVIEDLRVDVIGLQEVDRYW 84

Query: 79  AVAKVFPKNTWCIFYSTERLINHSK------RDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             +    +  W       +    +                  AV  +       +  L  
Sbjct: 85  KRSGFVDQPAWLAERLGMQHAFGANLDLDPEEPGRPRRQYGTAVLSRGPIRSWTNTHLPL 144

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                     R  ++  +++ G  +     HL+                    +QA  + 
Sbjct: 145 VPGH----EQRGLLQATLDVRGTCVEFAVTHLQH------------DDNKERERQAARIV 188

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + +     S    V+ GD N               I        +P+           L 
Sbjct: 189 ELLG---SSPEHTVLVGDLNATPETPEIG------ILTGALDDVWPRAGSGDGFTYDALD 239

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ID+ +  ++                   + +     SDH P+  D 
Sbjct: 240 PHARIDFHLASRDLGPL------------TAQVVTADPEASDHLPVVSDL 277


>gi|190406669|gb|EDV09936.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Saccharomyces cerevisiae RM11-1a]
          Length = 840

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L++   + D+D++ LQE+ S 
Sbjct: 504 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 563

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       I  ++   +++ +       
Sbjct: 564 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 623

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 624 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 683

Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235
             L D +    +              P +I GDFN  IN       +     I    +  
Sbjct: 684 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 743

Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
            F    +                      N        IDY            +      
Sbjct: 744 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 803

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH P+   ++F
Sbjct: 804 EYVSKFIGFPNDKFPSDHIPLLARFEF 830


>gi|313674251|ref|YP_004052247.1| endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126]
 gi|312940949|gb|ADR20139.1| Endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126]
          Length = 334

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 91/311 (29%), Gaps = 50/311 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--- 75
           S++  + ++++NI  LS               + +         + D D + LQE+    
Sbjct: 45  SISDTLSVLTYNIGYLSGMTNNRPVDREESLYSQNLARAIDLLSDYDFDFMGLQEVDFQS 104

Query: 76  ----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT---------AIAVRKKNVR 122
               +YN +  +     +     +              I           A+  + + + 
Sbjct: 105 SRSFNYNQLDSLGVHLNFHQGAYSVNWDKSYVPFPYFPIRNHFGRMYSGQAVLSKMQLLS 164

Query: 123 VLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                +        +  A    R      +++    + V+++HL++F             
Sbjct: 165 NELTVFDKPINAPFYYNAFYIDRVMQINKIQLYSDTLIVMNVHLEAF------------D 212

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN--------NDDFWKTIDPND 232
                 QA+ +     +      P ++ GDFN +  +                + +    
Sbjct: 213 RETRELQAEEVLVEFNKW-SKKYPVILMGDFNSRPPFASEVLEEEKTIEIFLEEPLIGEA 271

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                  + +S+            +DY   ++N  + +             D+    + +
Sbjct: 272 ISEERYLQNESQFFTFDTADPYERLDYVFYNKNKIRKIES-----------DVLREAEDI 320

Query: 293 SDHCPISIDYD 303
           SDH P+ + + 
Sbjct: 321 SDHLPVWMTFT 331


>gi|302877385|ref|YP_003845949.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2]
 gi|302580174|gb|ADL54185.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2]
          Length = 255

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 83/303 (27%), Gaps = 74/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L                      +  +      D++ LQE    +A    
Sbjct: 1   MKLATWNVNSL----------------KVRLPQVLDWLAANPVDVLCLQETKQQDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +   +  Q                +
Sbjct: 41  ------DFPDTELAAAGYHTVFAGQKTYNGVAILSREAAIDVQ------IGIPGFEDEQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +          I V+D+++ +    DS +  Y             L DW+ ++     
Sbjct: 89  RVIAATF----GDIRVVDVYIPNGQSPDSDKYQYK------LGWLAALHDWLKEELVRYP 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD+N                         D +K++        +   + +     
Sbjct: 139 KLVLLGDYNIAPEDRDVHDPAAWVGNVLVSPPERDAFKSLLALGLTDSYRLFEQAD-KTF 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++                    D    + +R SDH P+ 
Sbjct: 198 SWWDYRMMGFRRNLGMRIDHILISAPLVAQCKSCII-------DKAPRKLERPSDHTPVV 250

Query: 300 IDY 302
           ++ 
Sbjct: 251 VEL 253


>gi|6319298|ref|NP_009381.1| Ccr4p [Saccharomyces cerevisiae S288c]
 gi|308153426|sp|P31384|CCR4_YEAST RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|171854|gb|AAC04936.1| Ccr4p: Carbon catabolite repressor protein [Saccharomyces
           cerevisiae]
 gi|285810181|tpg|DAA06967.1| TPA: Ccr4p [Saccharomyces cerevisiae S288c]
          Length = 837

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L++   + D+D++ LQE+ S 
Sbjct: 501 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 560

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       I  ++   +++ +       
Sbjct: 561 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 620

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 621 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 680

Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235
             L D +    +              P +I GDFN  IN       +     I    +  
Sbjct: 681 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 740

Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
            F    +                      N        IDY            +      
Sbjct: 741 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 800

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH P+   ++F
Sbjct: 801 EYVSKFIGFPNDKFPSDHIPLLARFEF 827


>gi|121608305|ref|YP_996112.1| endonuclease/exonuclease/phosphatase [Verminephrobacter eiseniae
           EF01-2]
 gi|121552945|gb|ABM57094.1| Endonuclease/exonuclease/phosphatase [Verminephrobacter eiseniae
           EF01-2]
          Length = 245

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 85/288 (29%), Gaps = 52/288 (18%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76
               +R+ S+NI+           +        +   L    + LDADIV LQE+     
Sbjct: 3   QDDILRVASYNIH--------KGVQGIGPGRRLEIHNLGLAIEQLDADIVCLQEVRKLHR 54

Query: 77  --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +                  +             A+  +   +  Q   L    
Sbjct: 55  REQAYFQRWPELPQAQFLAPEGYEAVYRTNAVTRHGEHGNALLSRWPVIGHQHQDL---- 110

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S  R   R  + + ++++G+ + V+ +HL                     +Q + L+ +
Sbjct: 111 -SDHRFEQRGLLHVQLDVHGRPLHVIVVHLGLIAGS-------------RMRQIERLQGF 156

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I ++  S  P V+AGDFN     +      +  ++              R          
Sbjct: 157 IEREVPSAAPLVVAGDFNDWGVQVKRMLAGFALLE----------FDAPRAFTYPARLPL 206

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D+          L   S                R+SDH P+  ++
Sbjct: 207 VQLDHVYARG-----LAPLSLHVPRGRI------WWRMSDHLPLIAEF 243


>gi|28897777|ref|NP_797382.1| exonuclease III [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363798|ref|ZP_05776553.1| exodeoxyribonuclease III [Vibrio parahaemolyticus K5030]
 gi|260876941|ref|ZP_05889296.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AN-5034]
 gi|260897916|ref|ZP_05906412.1| exodeoxyribonuclease III [Vibrio parahaemolyticus Peru-466]
 gi|28805990|dbj|BAC59266.1| exodeoxyribonuclease III [Vibrio parahaemolyticus RIMD 2210633]
 gi|308085493|gb|EFO35188.1| exodeoxyribonuclease III [Vibrio parahaemolyticus Peru-466]
 gi|308093887|gb|EFO43582.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AN-5034]
 gi|308113909|gb|EFO51449.1| exodeoxyribonuclease III [Vibrio parahaemolyticus K5030]
          Length = 268

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 80/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKQEPIRVQK----GFPTDNEEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      NG+K+ VL+       F       +        Q  + L  ++     +  
Sbjct: 91  MIMATFENENGEKVTVLN-----GYFPQGDNINHETKFPYKRQFYKDLMTYLNDHHSNDE 145

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               ++ KT+        F K   
Sbjct: 146 QLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFEDTFRKLYP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +   +  +  I+          D      ++ S
Sbjct: 206 EVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQKCIESGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|328473247|gb|EGF44095.1| exonuclease III [Vibrio parahaemolyticus 10329]
          Length = 268

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 82/309 (26%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKQEPIRVQK----GFPTDNEEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+K+ VL+       F      ++        Q  + L  ++     +  
Sbjct: 91  MIMVTFEDENGEKVTVLN-----GYFPQGDNISHETKFPYKRQFYKDLMTYLNDHHSNDE 145

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               ++ KT+        F K   
Sbjct: 146 QLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFEDTFRKLYP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +   +  +  I+          D      ++ S
Sbjct: 206 EVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQKCIESGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|325962168|ref|YP_004240074.1| extracellular nuclease [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468255|gb|ADX71940.1| putative extracellular nuclease [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 1467

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 99/348 (28%), Gaps = 68/348 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGV----------------SLWKNSVKRTTSDYT---- 55
             A+V   ++L S+N+       G                 ++      R  ++      
Sbjct: 459 APAAVGGNLKLASFNVLNYFPTTGDQLTGCTYYDDREGNPITVRGGCDARGAANAENIKR 518

Query: 56  ---LLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNT------WCIFYSTERL 98
               +        AD+V L E+ +         +A+A++           W    S    
Sbjct: 519 QQDKIVAAITKAGADVVTLMEIENSAQFGKDRDDALARLVEALNIETPGIWDYVRSPANA 578

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NG 154
              S     + I TA   +K     +  S       D+ + A  R+ +  + +      G
Sbjct: 579 PPLSDE---DMIRTAFIYKKAVAEPVGDSII---HNDTVAFATARKPLAQVFKPVGGDPG 632

Query: 155 KKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAG 209
            +   +  H KS     + E+T      S    + QA+ L D+ T  Q+ +      + G
Sbjct: 633 TEFIAIANHFKSKGSAATPEDTDKGQGASNLARTAQAKSLLDFATSLQESKGTDKVFLIG 692

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           DFN        N          D   R         ++         +D+ +    A   
Sbjct: 693 DFNAYAKEDPINVFTAAGYVNQDGKARNADGTSK--HSYLYGGMVGSLDHILASPAADAA 750

Query: 270 LIQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303
           +       I   E                      R SDH P+ +  D
Sbjct: 751 VTGADIWNINSVESVALEYSRYNSNITNYYAPDQYRASDHDPVIVGLD 798


>gi|21106532|gb|AAM35338.1| nuclease [Xanthomonas axonopodis pv. citri str. 306]
          Length = 1131

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 93/340 (27%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 516 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 575

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120
              E+ +   +  +  +       + ++   +     + +    I     V+        
Sbjct: 576 GTVEVENLGVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADIAGGV 635

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168
            RV   S    G   +++  G        R  + L   ++        +  + +H +S  
Sbjct: 636 PRVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQAEGRTLPLTAIVVHQRSLN 695

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225
             ++ +   +   +    QA++L   +   Q+       ++ GDFN      G  D    
Sbjct: 696 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 755

Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + ++   +
Sbjct: 756 VTGKPAPDAQTVVGGDGADLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANEALMR 815

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 816 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 855


>gi|77748525|ref|NP_640802.2| nuclease [Xanthomonas axonopodis pv. citri str. 306]
          Length = 1193

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 93/340 (27%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120
              E+ +   +  +  +       + ++   +     + +    I     V+        
Sbjct: 638 GTVEVENLGVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADIAGGV 697

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168
            RV   S    G   +++  G        R  + L   ++        +  + +H +S  
Sbjct: 698 PRVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQAEGRTLPLTAIVVHQRSLN 757

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225
             ++ +   +   +    QA++L   +   Q+       ++ GDFN      G  D    
Sbjct: 758 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 817

Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + ++   +
Sbjct: 818 VTGKPAPDAQTVVGGDGADLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANEALMR 877

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 878 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917


>gi|54309891|ref|YP_130911.1| exonuclease III [Photobacterium profundum SS9]
 gi|46914330|emb|CAG21109.1| putative exodeoxyribonuclease III [Photobacterium profundum SS9]
          Length = 268

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 86/310 (27%), Gaps = 74/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+   +    D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   V  Q       +D+      R
Sbjct: 42  -------FPLADVEAMGYKVYHHGQKAHYGVAMLCKQEPVNIQKGFPTDDEDA-----QR 89

Query: 144 RAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +    E  +GKK+ VL+       F      ++        +    L +++     + 
Sbjct: 90  RMIMATFEQEDGKKVTVLN-----GYFPQGENLSHETKFPAKEKFYADLMNYLNTHHTNE 144

Query: 203 VPFVIAGDFNRKINYLG---------------------NNDDFWKTIDPNDSLIRFPKEK 241
              ++ GD N     L                         ++ KT+        F +  
Sbjct: 145 EEVIVMGDINISPIDLDIGIGPANAKRWLKTGKCSFQLIEREWLKTLMDWGFTDTFRQLH 204

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +   +     I           D      ++ 
Sbjct: 205 PDVDDQFSWFDYRSKGFVDNRGLRIDVVLATPSLAARCIDAGI-------DYELRGIEKP 257

Query: 293 SDHCPISIDY 302
           SDH PI   +
Sbjct: 258 SDHAPIWSTF 267


>gi|260545435|ref|ZP_05821176.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038]
 gi|260096842|gb|EEW80717.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038]
          Length = 279

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 69/315 (21%)

Query: 13  LVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            +PC A       +++ +WNIN                   +    L+ + +    DIV 
Sbjct: 7   CLPCPARAHNHYGMKIATWNIN----------------SVKARIDNLQHWLRESSPDIVC 50

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ S +                    + +            +A+  K           
Sbjct: 51  LQEIKSVDE----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               D  +R      +E +   +   + V+ ++L +   +D+ +  Y  S        Q 
Sbjct: 101 GDDSDEQARF-----IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQR 149

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIR 236
           L++W  ++     P V+AGD+N      +           +             N     
Sbjct: 150 LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTD 209

Query: 237 FPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +              +           ID+ ++   A    I  +  + +        
Sbjct: 210 AIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------R 262

Query: 288 RGKRLSDHCPISIDY 302
             ++ SDH P+++  
Sbjct: 263 AWEKPSDHVPVTVTL 277


>gi|294141415|ref|YP_003557393.1| extracellular nuclease [Shewanella violacea DSS12]
 gi|293327884|dbj|BAJ02615.1| extracellular nuclease, putative [Shewanella violacea DSS12]
          Length = 943

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 90/327 (27%), Gaps = 50/327 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDADIVFLQ 72
           +      L S+N+      +G      + +              +      ++AD++ L 
Sbjct: 454 AAGGNFTLASFNVLNYFNGDGAGAGFPTPRGADTAAEFTRQRDKIIAAMVAINADVLGLM 513

Query: 73  EMGS-----YNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQ 125
           E+ +      +A+A +       I  +    ++   +     + I   +  R   V +  
Sbjct: 514 EIENDGFGSESAIADLVSGLNLAIGETRYAYVSAATAAGIGTDAITVGMIYRLDKVSLDG 573

Query: 126 QSYPLLGAKDS--------FSRAGNRRAVE--LLVEINGKKIWVLDIHLKSFCFL----- 170
            +  L  A           F+   NR  +        + + I V   H KS         
Sbjct: 574 VAKVLSSANSPLDANNNPLFNDGKNRPMLTQGFRHLDSDEVIVVAVNHFKSKGSDCDSLG 633

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
           D   N    +C+L   +A        + +      ++ GD N               +  
Sbjct: 634 DPDMNDGQGNCNLTRTRAAEAVGLWLEAEYGEADVLVMGDLNAYGQENP-----LTALKN 688

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289
                 F         +         +D+ + + +    +I  +   I  +E  +     
Sbjct: 689 AGFTELFDHLDKDNAYSYVYSGESGQLDHALANVSLLDKIIDVTEWHINTDEPRLLDYNQ 748

Query: 290 ----------------KRLSDHCPISI 300
                            R SDH P+ I
Sbjct: 749 EFKSDAQLIDLYNADAYRSSDHDPVII 775


>gi|109898960|ref|YP_662215.1| exodeoxyribonuclease III [Pseudoalteromonas atlantica T6c]
 gi|109701241|gb|ABG41161.1| Exodeoxyribonuclease III [Pseudoalteromonas atlantica T6c]
          Length = 269

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 78/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN                   +    L+        DI+ LQE+  +N +   
Sbjct: 1   MKIISFNING----------------IRARLHQLQALIDKHQPDIIGLQEIKVHNDM--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + ++        H  +A+  K      Q     G       A  R
Sbjct: 42  -------FPVADVEAMGYNVYFHGQKAHYGVAMLCKKEPTDVQ----YGFPTDDEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      NG+ + VL+       F      ++        +  + L  ++        
Sbjct: 91  MIMVSYPMPNGETVRVLN-----GYFPQGENRSHETKFPAKRKYYEDLSTYLNTHHTPDD 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                          L     +   +        F     
Sbjct: 146 NVIVMGDVNISHTDLDIGIGEPNRKRWLQTGKCSFLPEERVWLNDLIDWGFTDGFRTLNP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +  +  ++ L            D      ++ S
Sbjct: 206 ETNEHFSWFDYRSKGFLDNRGLRIDLILATKKLHESLTDAGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 259 DHAPIWAEF 267


>gi|239831752|ref|ZP_04680081.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301]
 gi|239824019|gb|EEQ95587.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301]
          Length = 272

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 85/313 (27%), Gaps = 70/313 (22%)

Query: 16  CTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +   A     +++ +WNIN                   +    L  + K    DIV LQ
Sbjct: 2   PSPPQAHNHSGMKIATWNING----------------VKARIDNLLHWLKESSPDIVCLQ 45

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ S +                    + +            +A+  K             
Sbjct: 46  EIKSVDD----------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINRGLPGD 95

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D  +R      +E +   +   + V+ ++L +   +D+ +  Y  S        Q L+
Sbjct: 96  DSDEQARF-----IEGVYSTDKGVVRVVSLYLPNGNPVDTEKFPYKLS------WMQRLE 144

Query: 193 DWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFP 238
            W   +     P V+AGD+N      +           +             N       
Sbjct: 145 LWARDRLALEEPLVLAGDYNVIPEPEDARNPGQWVGDALFQPQSRQAFRRLENMGFTDAI 204

Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +              +           ID+ ++   A    I     + +          
Sbjct: 205 RASTDEAGIYSFWDYQAGAWQKNNGIRIDHLMLSPEAANRFISSDVEKHV-------RAW 257

Query: 290 KRLSDHCPISIDY 302
           ++ SDH P++I  
Sbjct: 258 EKPSDHVPVTIRL 270


>gi|197285354|ref|YP_002151226.1| exodeoxyribonuclease III [Proteus mirabilis HI4320]
 gi|194682841|emb|CAR43141.1| exodeoxyribonuclease III [Proteus mirabilis HI4320]
          Length = 268

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 78/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP         T   + +         H  +A+  K   V  +                R
Sbjct: 42  FP-------LETVSALGYHVFYHGQKGHYGVALLTKAKPVAVRK-----GFPGDGEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E     + V++       F       +       ++    L+ ++T       
Sbjct: 90  RMIMADIETPAGLLTVMN-----GYFPQGESRDHETKFPAKAKFYADLQQYLTTSLTPSS 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                               ++  T+        +  +  
Sbjct: 145 PVLIMGDLNISPTDKDIGIGENNMKRWLKMGKCSFLPEEREWLATLMGWGLTDTYRAQHP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  +      I           D      ++ S
Sbjct: 205 EVEDQFSWFDYRSKGFDDNRGLRIDLLLASRCLADNCISTGI-------DYDIRAMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+  ++
Sbjct: 258 DHAPVWAEF 266


>gi|120612279|ref|YP_971957.1| endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1]
 gi|120590743|gb|ABM34183.1| Endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1]
          Length = 252

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 85/285 (29%), Gaps = 53/285 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI+           +        +   L    + LDADIV LQE+   +     
Sbjct: 13  LRIATYNIH--------KGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVH-RRGA 63

Query: 84  FPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                W      E L                      A+  +   +  Q         S 
Sbjct: 64  RHFPRWPELPQAEFLAPEGYEAVYRTNAFTRHGEHGNALLTRWPVIGHQH-----EDMSD 118

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  + + VE+ G+++  + +HL                     +Q + L+ ++ +
Sbjct: 119 HRFELRGLLHVEVEVQGRRVHAIVVHLGLIPGS-------------RVRQVEQLQRFVAR 165

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           +     P V+AGDFN         D   +      +      E + R          + +
Sbjct: 166 EVPPGAPLVVAGDFN---------DWGRQVKHALAAFGLREYEGEPRALTYPARLPLVQL 216

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+  +       +                    R+SDH P+  ++
Sbjct: 217 DHVYVRG-----MEPMGLHVPRGRI------WWRMSDHLPLIAEF 250


>gi|94309326|ref|YP_582536.1| endonuclease/exonuclease/phosphatase [Cupriavidus metallidurans
           CH34]
 gi|93353178|gb|ABF07267.1| Putative endonuclease/exonuclease/phosphatase protein [Cupriavidus
           metallidurans CH34]
          Length = 251

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 99/286 (34%), Gaps = 51/286 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
           K+R+V++NI+                        +R   +++DADIVFLQE+   N    
Sbjct: 2   KLRVVTYNIH----------KGVKGFTGKPRIQSVRTGLQSMDADIVFLQEVQDRNDRLI 51

Query: 80  VAKVFPKNTWCIFY---STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            A++F  +   + Y          + +    +  H   A+  ++  ++ ++  +     S
Sbjct: 52  AAELFDPDHTQLNYLATDAYPHSVYGRNAVYDHGHHGNAILSRHPILMSENLDI-----S 106

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R   R  +  + +ING +  ++ +H   F                  +Q   L + + 
Sbjct: 107 DHRFEQRGLLHAVADINGVEAHLICVHFGLFAGS-------------RVRQTTALVERVR 153

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               +  P VIAGDFN   + L +      T++  +S       K+ R +   +      
Sbjct: 154 SVVPADAPLVIAGDFNDWNHKLDSK--ICNTLNAVESANA----KNGRIHTFPSHMPWWQ 207

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D                  E    +        + SDH P+  + 
Sbjct: 208 LDRIYARG-----------FEFERTQALTGREWAQRSDHVPLMAEL 242


>gi|323497693|ref|ZP_08102709.1| exonuclease III [Vibrio sinaloensis DSM 21326]
 gi|323317276|gb|EGA70271.1| exonuclease III [Vibrio sinaloensis DSM 21326]
          Length = 268

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 87/309 (28%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q       +D       R
Sbjct: 42  -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKKEPISVQKGFPTDNEDHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  + + NG+K+ +L+       F      ++        Q  + L  ++     +  
Sbjct: 91  MIMVTVEDDNGEKVTILN-----GYFPQGDNISHETKYPYKRQFYKDLMTYLNDHHSNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 QLVVMGDINISPLDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFVDTFRQIHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  I+        + D      ++ S
Sbjct: 206 DANDRFSWFDYRSKGFPDNRGLRIDVVLATAKLAEKCIES-------DIDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|284007473|emb|CBA72938.1| exodeoxyribonuclease III [Arsenophonus nasoniae]
          Length = 269

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 83/313 (26%), Gaps = 79/313 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ VS+NIN+L                 +    L    +    D++ LQE  +       
Sbjct: 1   MKFVSFNINSL----------------RARIHQLEAIIEKHQPDVIGLQETKVDDNAFPL 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKDSFSRA 140
           +   +  + I                   H  +A+  K     +Q+ +P           
Sbjct: 45  EQLNQLGYHI------------CYHGQKAHYGVALFCKQKPITIQKGFP------GDDID 86

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +E     I +++       F       +    +  ++  Q L+ ++     
Sbjct: 87  AQRRIIMADIETEQGIITIIN-----GYFPQGECRDHPTKFAAKAKFYQDLQLYLQSNLS 141

Query: 201 SLVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPK 239
                +I GD N                               ++   +     +  + +
Sbjct: 142 PQSHIIIMGDMNISPTDHDIGIGEINRKRWLSAGKCSFLPEEREWMDKLKSWGLIDTYRQ 201

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           +     +       +           ID  +   + +    +          D      +
Sbjct: 202 QNPEITDQFSWFDYRSKGFVDNRGLRIDLILASSSLFACCGETGI-------DYDIRSME 254

Query: 291 RLSDHCPISIDYD 303
           + SDH PI   ++
Sbjct: 255 KPSDHAPIWAKFE 267


>gi|59801894|ref|YP_208606.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA 1090]
 gi|59718789|gb|AAW90194.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA 1090]
          Length = 256

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLVDNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++V              S      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHF-----GLPSLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMSRHG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RIDLETRALERPSDHAPVA 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|323349895|gb|EGA84106.1| Ccr4p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 843

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L++   + D+D++ LQE+ S 
Sbjct: 507 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 566

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       I  ++   +++ +       
Sbjct: 567 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 626

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 627 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 686

Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235
             L D +    +              P +I GDFN  IN       +     I    +  
Sbjct: 687 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 746

Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
            F    +                      N        IDY            +      
Sbjct: 747 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 806

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH P+   ++F
Sbjct: 807 EYVSKFIGFPNDKFPSDHIPLLARFEF 833


>gi|110680357|ref|YP_683364.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh
           114]
 gi|109456473|gb|ABG32678.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh
           114]
          Length = 260

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 82/302 (27%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  + K    D+  LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------IKARIDALPAWLKEAQPDVALLQEIKS---VDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +         + ++           +A+  K               D  +R    
Sbjct: 42  FPRTVF-------EDMGYNLETHGQKSFNGVAILSKLPLEDVTRGLPGDETDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V  +   + V  ++L +       +  Y             L D          
Sbjct: 92  --IEATVMGDTAPVRVCGLYLPNGNPAPGPKYDYKLD------WMARLYDRAKALLADET 143

Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDP-------NDSLIRFPKEKDSRCNANK 249
            FV+AGD+N                D  ++           N  L    + +        
Sbjct: 144 TFVMAGDYNIIPQAEDAAKPESWREDALFRLESRTAFRRLLNLGLTEAFRARTQGPGHYS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L+           D       + SDH P+ +
Sbjct: 204 FWDYQAGAWNRNNGIRIDHLLLSPQAADMLVDCQI-------DKEVRGRDKPSDHVPVWV 256

Query: 301 DY 302
           D 
Sbjct: 257 DL 258


>gi|83647712|ref|YP_436147.1| endonuclease/exonuclease/phophatase family protein [Hahella
           chejuensis KCTC 2396]
 gi|83635755|gb|ABC31722.1| endonuclease/exonuclease/phophatase family protein [Hahella
           chejuensis KCTC 2396]
          Length = 445

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 96/290 (33%), Gaps = 27/290 (9%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             +  ++++++N   L       L     K T++    + +  K  DA  V  QE+    
Sbjct: 171 PQSNHLKVLTYNAWAL-------LPGLMSKNTSNRLATMAEAVKGYDA--VVFQEVFDPI 221

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A+          Y TE      +  +         +  +   +  Q   +     +  
Sbjct: 222 LTARFRSDLQAEYPYLTEIPFKLGRLLTG-----GSFIASRWPIL-AQDAMVYEGCRNDG 275

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              ++ A    ++  G+   +   H  ++              +L     Q  K ++  K
Sbjct: 276 CFASKGANYAKIDKGGQIYHLFGAHTHAYTG--------EEDVALRRWHLQQYKAFVDSK 327

Query: 199 -KESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKNLRNK 254
              +  P +IAGD N  K+N+   + D    +D ++   +  +P   D   N   + +  
Sbjct: 328 GAAADEPVIIAGDLNVDKLNFPAEHQDMLAILDASEPPSQSQYPHSYDGGVNTFADSQLT 387

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +DY +   +    +   +   I             LSDH P+  ++ F
Sbjct: 388 EYLDYVLTSNSHVAPVYSHNRVRIPRFIQWEHWTSWDLSDHFPVEGEFVF 437


>gi|284040838|ref|YP_003390768.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
 gi|283820131|gb|ADB41969.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
          Length = 1015

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 92/314 (29%), Gaps = 44/314 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQE 73
           Q + +VSWN+       G     N  +    +           +R      +ADI  LQE
Sbjct: 530 QTLSVVSWNLEWYGFDGGSYTCTNGSRTYADNGPTNETLQAQNVRSVMDAFNADIYILQE 589

Query: 74  MGSYNAV-------AKVFPKNTWCIFYSTERLINHSKRDSNN----DIHTAIAVRKKNV- 121
           +   N +         +   + +  ++  +    +      N    +    +  +   V 
Sbjct: 590 VSDKNLLVTNTPAGYALSCSDQYTSYFFQDLCDANGNPQGFNPTSLNQKVCVMYKTSVVS 649

Query: 122 ---------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
                       + SY      D+++           V ++G+   +  + + +      
Sbjct: 650 MIPAESKPLLTDKYSYTTTPRSDAWASGRLPYLFVANVTVDGQTRKLYIVDIHAKSG--- 706

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---GNNDDFWKTID 229
              +     +   Q    LK  +       V  ++AGD+N  ++     GN   +   + 
Sbjct: 707 ---SAQADYNRRKQDIIDLKAELDANYG-NVNLIMAGDYNDDVDQSIAAGNPSSYANFVS 762

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
             +  +   +   S CN   +      ID+  +        +  S          + +  
Sbjct: 763 DPNYTVISSELSSSNCNT--DANFTDAIDHITVSNELASSYVAGSV---ASVRPAVVNYA 817

Query: 290 KRLSDHCPISIDYD 303
              SDH P    + 
Sbjct: 818 LTTSDHYPTFARFT 831


>gi|319426820|gb|ADV54894.1| exodeoxyribonuclease III [Shewanella putrefaciens 200]
          Length = 270

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 80/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 S    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RSRLHQLQALIDSHKPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K      Q     G       A  R
Sbjct: 42  -------FPLAEVEAMGYQVHYHGGKAHYGVAMLSKVAPQKIQK----GFPSDDEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + V +       F       +        +  Q L  ++     +  
Sbjct: 91  MIIGTFSQANGRPLTVFN-----GYFPQGESIDHPTKYPAKRKFYQDLMHYLQTNHSNDE 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                               ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLIDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +   +    LI+        + D       + S
Sbjct: 206 ERTERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLIES-------DVDYDLRGIDKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|256272261|gb|EEU07246.1| Ccr4p [Saccharomyces cerevisiae JAY291]
          Length = 834

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 83/327 (25%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L++   + D+D++ LQE+ S 
Sbjct: 498 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 557

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       I  ++   +++ +       
Sbjct: 558 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 617

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 618 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 677

Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235
             L D +    +              P +I GDFN  IN             I    +  
Sbjct: 678 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELISTGRVQIHQEGNGR 737

Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
            F    +                      N        IDY            +      
Sbjct: 738 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 797

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH P+   ++F
Sbjct: 798 EYVSKFIGFPNDKFPSDHIPLLARFEF 824


>gi|254498807|ref|ZP_05111518.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254351971|gb|EET10795.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 265

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 83/304 (27%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +L SWN+N+L                      +  + +    D++ LQE        K+
Sbjct: 9   FKLASWNVNSL----------------KIRLDQVLAWMETSQMDVLALQE-------TKL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +N     +       +    S    +  +A+  +                       R
Sbjct: 46  LDENFPAAAF---IEKGYHIVYSGQKTYNGVAIISRYPITDV------MTDVPDLADPQR 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + + V      I ++D+++ +   L S +  Y           Q +  +I Q+     
Sbjct: 97  RILAVTV----AGIRLIDLYVPNGSELTSDKYQYK------LHWLQKVTAFIQQQMSIYP 146

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              + GDFN        +D                 +  +        F     +   + 
Sbjct: 147 KVAVVGDFNIAPEDRDVHDPLEWQDSVLVSPPEREAFAALLQLGLYDSFRNFVQAE-QSF 205

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++ Q       Q          +       R SDH P+ 
Sbjct: 206 SWWDYRAAGFRRNRGLRIDHVLLSQELNVLCRQSCIDVEPRKTE-------RPSDHAPVW 258

Query: 300 IDYD 303
           ++ +
Sbjct: 259 VELE 262


>gi|238061691|ref|ZP_04606400.1| hypothetical protein MCAG_02657 [Micromonospora sp. ATCC 39149]
 gi|237883502|gb|EEP72330.1| hypothetical protein MCAG_02657 [Micromonospora sp. ATCC 39149]
          Length = 457

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/291 (10%), Positives = 70/291 (24%), Gaps = 35/291 (12%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +  A  + ++++N+   S         +           +R+       D++  QE  + 
Sbjct: 51  SPAAADLDVMTFNLRYASS--------SRPNSWAQRRPAMRELLTAEQPDLIGTQEGLAG 102

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                     +        R                     +         P +   +++
Sbjct: 103 QLANIKQDLGSRYELIGVGREGGTRGEYMAIFYDNTRLQPLEQHHFWLSDTPEVVGSNTW 162

Query: 138 SRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                R    +     + G +++ ++ HL      ++       +  L+  +   L    
Sbjct: 163 GGGSIRMVTWVRFRDVVTGGQLYAVNTHL-----DNASALARERAAQLIRARLAALA--- 214

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253
                  +P V+ GDFN          D                          N +   
Sbjct: 215 -----PGLPIVLTGDFNSGPWAGSPVYDVLVRQAGLVDTWTAAAATGPAYGTYHNYQPLV 269

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID+ +  +         +              G+  SDH P+    
Sbjct: 270 AGGARIDWILATRGVTVSAAAIN--------TYGSGSGQFPSDHLPVQARL 312


>gi|163741419|ref|ZP_02148810.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis 2.10]
 gi|161385153|gb|EDQ09531.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis 2.10]
          Length = 268

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 88/306 (28%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L ++      D+V LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------IKARINALPEWLDEAQPDVVVLQEIKS---VDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +           ++           +A+  K      +        D  +R    
Sbjct: 42  FPRELF-------EDRGYNVETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +E  V +  + I +  ++L +                  +      + L+        
Sbjct: 92  --IEATV-VGKQAIRICGLYLPNGNPVELDAEGRPVEGGKYAYKLAWMERLRQRAKDLLA 148

Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             +P ++AGD+N                   +   +   ++ I        F        
Sbjct: 149 EEMPALMAGDYNIIPQAEDAKTPDAWKDDALHRPESRAAFQRIVALGFTEAFRARHQGPG 208

Query: 246 NANKNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           + +            N I ID+F++   A   L            D       + SDH P
Sbjct: 209 HYSFWDYQAGAWNRNNGIRIDHFLLSPQAADLLRDCQI-------DKDVRGRDKPSDHVP 261

Query: 298 ISIDYD 303
           + +D D
Sbjct: 262 VWVDLD 267


>gi|148277|gb|AAA24767.1| exonuclease III [Escherichia coli]
          Length = 268

 Score = 95.4 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVANVGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|325298496|ref|YP_004258413.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
 gi|324318049|gb|ADY35940.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
          Length = 341

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/342 (11%), Positives = 86/342 (25%), Gaps = 52/342 (15%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTS 52
           K  + L   +           R++ +N+  L +    SL ++             K+   
Sbjct: 7   KIGVFLCLSVWSVCCFAQAPFRVMHYNVENLFDCRDDSLKQDEEFLPRAVRAWTWKKYHE 66

Query: 53  DYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
             T + +           D+V L E+ +   +  +     +            +      
Sbjct: 67  KVTKIAKVILAASGEQVPDLVGLCEVENAYCLDGL---TKYSPLRDAAYRYVMTDSPDER 123

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSF 167
            I  A+  +    R++      + +     R   R  + +    ++G  + V   H  S 
Sbjct: 124 GIDVALLYQPATFRLIGTECIRVPSGQI-GRKPTRDILHVSGRVVSGDTLDVFVCHFPSR 182

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFW 225
                       S       A  L+               +I GDFN   +    ++   
Sbjct: 183 SGG------ARQSAPHRLLAASVLRQAADSVSAVRRNPYLIIMGDFNDYPSSPSVSEALG 236

Query: 226 KTIDPNDSLI---RFPKEKDSRCNANKNLRNKIPIDYFVM-----DQNAYKFLIQESFS- 276
               P   +     +           +       +D F++       ++      +    
Sbjct: 237 AKEVPRTDVSSSVLYNLMAGKAGGTYRYRGEWGMLDQFIVNGTMLSPSSALCTGADRARP 296

Query: 277 ---------------EILYNEDDIKSRGKRLSDHCPISIDYD 303
                          +  +            SDH PI +D  
Sbjct: 297 LAFPFLLEEDRQYGGDTPFRTYKGLRYYGGYSDHLPICLDIT 338


>gi|170690563|ref|ZP_02881730.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M]
 gi|170144998|gb|EDT13159.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M]
          Length = 258

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 83/281 (29%), Gaps = 56/281 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + +R+V++NI+     +G                 + +    L+AD+V LQE+    A
Sbjct: 30  AGEPLRIVTYNIHGAVGTDG-----------KRSAARIAEVIAALNADVVALQEVPLGGA 78

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            +    +    +   T             D     AV      +  ++  L     SF  
Sbjct: 79  ASIDVLRELQDL---TGMHAVPGPTLDGPDRRFGNAVLTNLPVLAVRTLDL-----SFGS 130

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R A+++ ++     + ++  HL               S      Q + L   +    
Sbjct: 131 REARGALDVDIDTGNGLMRIVATHLGL-------------SARERRAQVRLL---LEAFD 174

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
              +P ++ GD N    +                  RF +    R   ++       +D 
Sbjct: 175 TPDLPVILLGDLNEWFVWGWPLRALL---------TRFGRVAAPRTFPSRFPAF--ALDR 223

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +   A           ++  E D     +  SDH P+  
Sbjct: 224 VWVHPAAR----------LVDIEVDRSRPARIASDHLPLVA 254


>gi|293367572|ref|ZP_06614225.1| phospholipase C [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291318285|gb|EFE58678.1| phospholipase C [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 334

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 98/301 (32%), Gaps = 33/301 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +++ + N+  L      +++ N  +   +D      Y +  + D+V L E+    A
Sbjct: 40  SKDSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKA 93

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLL 131
             ++  +      Y T  +   ++   N              + +  K   V Q+ + + 
Sbjct: 94  SNRLLTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGDVGIVSKWPIVQQEQH-IY 152

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                   AGN+    + +  NGK   ++  HL++    +           +   Q   +
Sbjct: 153 KKGCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMNEI 208

Query: 192 KDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           K +I  +      P  I GD N  I            ++ +              ++N  
Sbjct: 209 KQFIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSI 267

Query: 251 LRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPI 298
            +          +DY ++D++  +     + +  + + +       +       SDH P+
Sbjct: 268 AKYNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPL 327

Query: 299 S 299
           S
Sbjct: 328 S 328


>gi|167753483|ref|ZP_02425610.1| hypothetical protein ALIPUT_01757 [Alistipes putredinis DSM 17216]
 gi|167658108|gb|EDS02238.1| hypothetical protein ALIPUT_01757 [Alistipes putredinis DSM 17216]
          Length = 345

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/349 (11%), Positives = 90/349 (25%), Gaps = 57/349 (16%)

Query: 1   MIRKYVLA-LVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTS 52
           M ++ +   L+  L        +  ++V +N+    +        +     +   K  + 
Sbjct: 1   MKKRLIFTGLLALLFAACCFAQKPYKVVFYNLENFFDTINDPEVNDDEFTPEGPKKWNSV 60

Query: 53  DY-------TLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102
            Y         +      +D D   ++ + E+ + + +  +               I+H 
Sbjct: 61  KYAKKLGNTEKVLFDIAGIDKDYPIVIGVSEVENRSVLEDIIATPKMAP---GNYRISHY 117

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
                  +  A   R    ++   + P+     S      R    +   I+G+  + +  
Sbjct: 118 DSPEARGVDVAFMYRPDVFKLEGSA-PIRTQIPSLPNFKTRDISTMWGTIDGEPFFFMVA 176

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           H  S             +     +Q + + D + +   +    V  GDFN         +
Sbjct: 177 HWPSRLGGKDASEFKRIAV---GEQMRRIADSVLKVNPATK-IVAMGDFNDDPTDQSMLE 232

Query: 223 DFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-------- 269
                   K + P D    F     +              D  V+ +N            
Sbjct: 233 GLGAKPKTKELQPGDFFSPFHAVLRAGMGTLAYGDAWNLFDNIVVSENLVNAKPGELRLV 292

Query: 270 ------------------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                               +  F           +     SDH P+ I
Sbjct: 293 RAPGSKYYGNVFKRNYMIQREGQFKGYPLRTYVGNNFQGGYSDHFPVYI 341


>gi|151941371|gb|EDN59742.1| CCR4-NOT transcriptional complex subunit [Saccharomyces cerevisiae
           YJM789]
          Length = 835

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 83/327 (25%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L++   + D+D++ LQE+ S 
Sbjct: 499 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 558

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       I  ++   +++ +       
Sbjct: 559 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 618

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 619 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 678

Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235
             L D +    +              P +I GDFN  IN             I    +  
Sbjct: 679 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELISTGRVQIHQEGNGR 738

Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
            F    +                      N        IDY            +      
Sbjct: 739 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 798

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH P+   ++F
Sbjct: 799 EYVSKFIGFPNDKFPSDHIPLLARFEF 825


>gi|313682984|ref|YP_004060722.1| endonuclease/exonuclease/phosphatase [Sulfuricurvum kujiense DSM
           16994]
 gi|313155844|gb|ADR34522.1| Endonuclease/exonuclease/phosphatase [Sulfuricurvum kujiense DSM
           16994]
          Length = 335

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 46/360 (12%), Positives = 102/360 (28%), Gaps = 85/360 (23%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSL----------WKNSVKRT 50
           M   ++LAL+   +        +V++ ++N+  L +                W  + +  
Sbjct: 1   MRILFLLALILSFLGGV-----EVKIATYNVENLFDMHYDGTEYEEYIPNGDWGWTNEMY 55

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +         + + ADI+ LQE+ S +A+  +  +      Y        ++     + 
Sbjct: 56  RAKLINTATVIRGIGADIIGLQEIESESALKDLKAEINRQGLYYPYYAFAKTR-----NS 110

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              +A+  +        +P+  +         R  +E  + I  K + V   H KS    
Sbjct: 111 AVNVALLSRYPIQSALKHPVNYSG------KYRDILEAKILIEEKPLRVFVNHWKSKGGP 164

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
           +S               A+ L   + +      P+V+ GDFN             K  + 
Sbjct: 165 ESE----------RIVCAKRLLQRLNE-LPEDEPYVLVGDFNSHYEEHKTFLKSRKHNNT 213

Query: 231 ND-----------------------------SLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
           +                                  + +    +  +++   +   +D  +
Sbjct: 214 DGITGINHILGTVNKEGNPITYTALKNTQGVRYNLWYELDKEKRWSHQFRGHGEGLDNII 273

Query: 262 MDQNAYK-------------------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + Q                       F   + +             G+  SDH PI   +
Sbjct: 274 ISQALADGIGIDYIEGSFDRYTPDYLFAKGKVYRWQQSRRYPKHHLGEGYSDHLPIYARF 333


>gi|295132909|ref|YP_003583585.1| hypothetical protein ZPR_1044 [Zunongwangia profunda SM-A87]
 gi|294980924|gb|ADF51389.1| probable secreted protein [Zunongwangia profunda SM-A87]
          Length = 282

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 89/307 (28%), Gaps = 55/307 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVR----LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           I+   L L+FF V   A   + VR    ++S+NI+  +      +          +   +
Sbjct: 21  IKSAFLILLFFNVIYKAHSQKLVRSEVIVLSYNIHHANPPSQSEV---------INLDTI 71

Query: 58  RQYAKNLDADIVFLQEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
               KN  ADIV LQE+  Y   + K           +       SK  +        A+
Sbjct: 72  ATIIKNSKADIVGLQEVDIYTERSGKKLNMAKVLAEKAGFEYWYFSKSINFQGGEYGTAI 131

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLEN 175
             K       +  L   K     A  R      + IN K +I + + HL      ++   
Sbjct: 132 LSKFPLSDTITTKLPNPK----NAEPRTLSLANIHINPKLEIKIANTHLDYTDASNN--- 184

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                      Q   ++  ++       P +I GDFN        N            + 
Sbjct: 185 ---------LAQVSAIRKILS---SEDKPVIITGDFNVVPESSSMNHLLEIFSSSCTDVC 232

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            F                   IDY +            +   + +       +    SDH
Sbjct: 233 DFTSSAQQSE---------STIDYILY--------KSNTIDVLEHKVL----KETFASDH 271

Query: 296 CPISIDY 302
            P+   +
Sbjct: 272 FPVKARF 278


>gi|302346863|ref|YP_003815161.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302151144|gb|ADK97405.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 347

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 45/352 (12%), Positives = 100/352 (28%), Gaps = 64/352 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-VRL---VSWNINTLSEQEGVSLWKN-----------S 46
           +RK +L L   ++  T++ AQK   +     +N+  L +        +           +
Sbjct: 1   MRKLLLVLFCAVLFGTSASAQKKFSVYAIGFYNVENLFDTTHDEGKNDHDFTPTGSYQWN 60

Query: 47  VKRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             + +     +      +  D+        + L E+ + + +  +    +          
Sbjct: 61  EMKYSHKLHNMASVLAEMGTDVLPNIGCAAIGLAEVENDHVMDDL---TSQPELAKRGYK 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +   +  I  A+    K   V      P +      S    R  + +   + G+ +
Sbjct: 118 YVHIEGPDHRGIDCALIYNPKLFTVRNTKLVPYVYDLPKDSTRATRGFLTVSGTLAGEHV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            ++  HL S                    Q + LKD +  +++  V  ++ GD N     
Sbjct: 178 TIVVCHLPSRGAGSYYRELGGK-------QVKALKDSL-LREDPKVKVLVMGDMNDDPTN 229

Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
               +      +       +     +           +        D  +M  N      
Sbjct: 230 KSMYECLSAKGEINEVGADDMYNPWYNVLVKEGTGTLQYQGKWNLFDQIIMTPNLLNKDG 289

Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
           ++ FSE+ + ++ I  R                           SDH P+  
Sbjct: 290 KKDFSELKFWKNQIFRRDYLFQESGKYKGNTKRTTAGGVWLDGYSDHLPVVA 341


>gi|76810233|ref|YP_334150.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b]
 gi|76579686|gb|ABA49161.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b]
          Length = 322

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 68/303 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ +WN+N+L+                     +  +    D D++ LQE         
Sbjct: 64  PMRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE--------- 98

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                             +    +    +  +A+  +       S P        +  G 
Sbjct: 99  -LKIPDEKFPREALEAAGYRSWFAGQKTYNGVAILAR------ASLPFDETDIVRNIPGF 151

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             A + L+      + ++  +  +   LDS +  Y        Q    L+ W+  + +  
Sbjct: 152 EDAQQRLIAATIDGVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLKDELQRY 205

Query: 203 VPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNAN 248
               + GD+N        +D         + P +                +  +      
Sbjct: 206 PKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFEQPEKTF 265

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++     +     +        D +    ++ SDH P+ 
Sbjct: 266 TWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPRTWEQPSDHTPVV 318

Query: 300 IDY 302
              
Sbjct: 319 AQL 321


>gi|269138847|ref|YP_003295548.1| exonuclease III [Edwardsiella tarda EIB202]
 gi|267984508|gb|ACY84337.1| exonuclease III [Edwardsiella tarda EIB202]
 gi|304558837|gb|ADM41501.1| Exodeoxyribonuclease III [Edwardsiella tarda FL6-60]
          Length = 269

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 77/309 (24%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFISFNINGL----------------RARPHQLAAIVEKHSPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  +   +  +                R
Sbjct: 42  FP-------LQDLAQLGYHLHYHGQKGHYGVALLTRMAPLAVRK-----GFPGDDAEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       S+    L+ ++        
Sbjct: 90  RIIMADIPTELGTLTVIN-----GYFPQGESRDHPIKFPAKSKFYADLQRYLQDALSPQN 144

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                        ++L    ++   +     +  + +   
Sbjct: 145 PVLIMGDMNITPRDIDIGIGEDSRRRWLRSGKCSFLPEEREWLDRLLAWGLVDTYRQANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +  Q   +              D      ++ S
Sbjct: 205 QGDERFSWFDYRSKGFDDNRGLRIDLLLASQPLAQRCTDTGI-------DYAIRAMEKPS 257

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 258 DHAPIWAEF 266


>gi|110598414|ref|ZP_01386686.1| Endonuclease/exonuclease/phosphatase [Chlorobium ferrooxidans DSM
           13031]
 gi|110339948|gb|EAT58451.1| Endonuclease/exonuclease/phosphatase [Chlorobium ferrooxidans DSM
           13031]
          Length = 339

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/344 (11%), Positives = 90/344 (26%), Gaps = 60/344 (17%)

Query: 5   YVLALVFFLVPCTASVA----QKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTSD 53
           +++++     PC A+ A    +++ L+ WNI  L +        +     + S   T   
Sbjct: 9   FLVSMALSWSPCHAAGAPSGRKEIVLLWWNIENLFDTHDDPVTDDDEFTPQGSRNWTAKK 68

Query: 54  Y----TLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
                  +R     ++         DIV   E+ +     +         + +       
Sbjct: 69  LLLKEMRIRHTLMAVEAHPDYGKFPDIVAFAEVENRQVFQQTLSGLPGITYKTVYYDSP- 127

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
                   I   +A   K V +            +      R+ +      +G    ++ 
Sbjct: 128 ----DPRGIDIGLAYNPKGVTLKASR----AYSVTLDEKPTRKIIIAEFSDSGDSFHLIL 179

Query: 162 IHLKSFCFLDSLEN-TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
            H  S  F           +  +       L+             +  GDFN +      
Sbjct: 180 NHWPSRAFDTGWSEPKRLAAAKVTRHILDSLR-----SSNPTADIITMGDFNDEPANRSL 234

Query: 221 NDDFWKTIDPN------DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----L 270
           ++    + D         +L+           +    R    ID  ++           +
Sbjct: 235 SEGLGSSFDAAQVRRNSKTLLYNCWSGYQGIGSYYYHRKWERIDQILLSAGMLDKEGFSV 294

Query: 271 IQESFSEILYN------------EDDIKSRGKRLSDHCPISIDY 302
             + F    ++              + +      SDH P+ +  
Sbjct: 295 SGDPFRCFTFSRMLLYPDNKPWPTYEKREYRGGYSDHLPLLLKI 338


>gi|16129703|ref|NP_416263.1| exonuclease III [Escherichia coli str. K-12 substr. MG1655]
 gi|74311932|ref|YP_310351.1| exonuclease III [Shigella sonnei Ss046]
 gi|82543848|ref|YP_407795.1| exonuclease III [Shigella boydii Sb227]
 gi|89108588|ref|AP_002368.1| exonuclease III [Escherichia coli str. K-12 substr. W3110]
 gi|157157800|ref|YP_001463047.1| exonuclease III [Escherichia coli E24377A]
 gi|157161211|ref|YP_001458529.1| exonuclease III [Escherichia coli HS]
 gi|170081406|ref|YP_001730726.1| exonuclease III [Escherichia coli str. K-12 substr. DH10B]
 gi|187730490|ref|YP_001880544.1| exonuclease III [Shigella boydii CDC 3083-94]
 gi|188495310|ref|ZP_03002580.1| exodeoxyribonuclease III [Escherichia coli 53638]
 gi|191169042|ref|ZP_03030806.1| exodeoxyribonuclease III [Escherichia coli B7A]
 gi|193065803|ref|ZP_03046866.1| exodeoxyribonuclease III [Escherichia coli E22]
 gi|193068936|ref|ZP_03049895.1| exodeoxyribonuclease III [Escherichia coli E110019]
 gi|194428570|ref|ZP_03061109.1| exodeoxyribonuclease III [Escherichia coli B171]
 gi|194438505|ref|ZP_03070594.1| exodeoxyribonuclease III [Escherichia coli 101-1]
 gi|209919111|ref|YP_002293195.1| exonuclease III [Escherichia coli SE11]
 gi|218554315|ref|YP_002387228.1| exonuclease III [Escherichia coli IAI1]
 gi|238900963|ref|YP_002926759.1| exonuclease III [Escherichia coli BW2952]
 gi|254161808|ref|YP_003044916.1| exonuclease III [Escherichia coli B str. REL606]
 gi|256018057|ref|ZP_05431922.1| exonuclease III [Shigella sp. D9]
 gi|256022587|ref|ZP_05436452.1| exonuclease III [Escherichia sp. 4_1_40B]
 gi|260844099|ref|YP_003221877.1| exonuclease III [Escherichia coli O103:H2 str. 12009]
 gi|260855614|ref|YP_003229505.1| exonuclease III [Escherichia coli O26:H11 str. 11368]
 gi|260868274|ref|YP_003234676.1| exonuclease III [Escherichia coli O111:H- str. 11128]
 gi|293446121|ref|ZP_06662543.1| exodeoxyribonuclease III [Escherichia coli B088]
 gi|297518661|ref|ZP_06937047.1| exonuclease III [Escherichia coli OP50]
 gi|301020970|ref|ZP_07185022.1| exodeoxyribonuclease III [Escherichia coli MS 196-1]
 gi|307138408|ref|ZP_07497764.1| exonuclease III [Escherichia coli H736]
 gi|307310679|ref|ZP_07590325.1| exodeoxyribonuclease III [Escherichia coli W]
 gi|312969777|ref|ZP_07783960.1| exodeoxyribonuclease III [Escherichia coli 1827-70]
 gi|332279097|ref|ZP_08391510.1| exonuclease III [Shigella sp. D9]
 gi|2506193|sp|P09030|EX3_ECOLI RecName: Full=Exodeoxyribonuclease III; Short=EXO III;
           Short=Exonuclease III; AltName: Full=AP endonuclease VI
 gi|157829928|pdb|1AKO|A Chain A, Exonuclease Iii From Escherichia Coli
 gi|43312|emb|CAA31424.1| exonuclease III [Escherichia coli K-12]
 gi|1742858|dbj|BAA15540.1| exonuclease III [Escherichia coli str. K12 substr. W3110]
 gi|1788046|gb|AAC74819.1| exonuclease III [Escherichia coli str. K-12 substr. MG1655]
 gi|73855409|gb|AAZ88116.1| exonuclease III [Shigella sonnei Ss046]
 gi|81245259|gb|ABB65967.1| exonuclease III [Shigella boydii Sb227]
 gi|157066891|gb|ABV06146.1| exodeoxyribonuclease III [Escherichia coli HS]
 gi|157079830|gb|ABV19538.1| exodeoxyribonuclease III [Escherichia coli E24377A]
 gi|169889241|gb|ACB02948.1| exonuclease III [Escherichia coli str. K-12 substr. DH10B]
 gi|187427482|gb|ACD06756.1| exodeoxyribonuclease III [Shigella boydii CDC 3083-94]
 gi|188490509|gb|EDU65612.1| exodeoxyribonuclease III [Escherichia coli 53638]
 gi|190900924|gb|EDV60709.1| exodeoxyribonuclease III [Escherichia coli B7A]
 gi|192926575|gb|EDV81206.1| exodeoxyribonuclease III [Escherichia coli E22]
 gi|192957731|gb|EDV88175.1| exodeoxyribonuclease III [Escherichia coli E110019]
 gi|194413448|gb|EDX29731.1| exodeoxyribonuclease III [Escherichia coli B171]
 gi|194422515|gb|EDX38513.1| exodeoxyribonuclease III [Escherichia coli 101-1]
 gi|209912370|dbj|BAG77444.1| exonuclease III [Escherichia coli SE11]
 gi|218361083|emb|CAQ98666.1| exonuclease III [Escherichia coli IAI1]
 gi|238861051|gb|ACR63049.1| exonuclease III [Escherichia coli BW2952]
 gi|242377470|emb|CAQ32223.1| exonuclease III [Escherichia coli BL21(DE3)]
 gi|253973709|gb|ACT39380.1| exonuclease III [Escherichia coli B str. REL606]
 gi|253977903|gb|ACT43573.1| exonuclease III [Escherichia coli BL21(DE3)]
 gi|257754263|dbj|BAI25765.1| exonuclease III [Escherichia coli O26:H11 str. 11368]
 gi|257759246|dbj|BAI30743.1| exonuclease III [Escherichia coli O103:H2 str. 12009]
 gi|257764630|dbj|BAI36125.1| exonuclease III [Escherichia coli O111:H- str. 11128]
 gi|291322951|gb|EFE62379.1| exodeoxyribonuclease III [Escherichia coli B088]
 gi|299881725|gb|EFI89936.1| exodeoxyribonuclease III [Escherichia coli MS 196-1]
 gi|306908857|gb|EFN39353.1| exodeoxyribonuclease III [Escherichia coli W]
 gi|309701971|emb|CBJ01285.1| exodeoxyribonuclease III [Escherichia coli ETEC H10407]
 gi|310338062|gb|EFQ03151.1| exodeoxyribonuclease III [Escherichia coli 1827-70]
 gi|320173600|gb|EFW48793.1| Exodeoxyribonuclease III [Shigella dysenteriae CDC 74-1112]
 gi|320184212|gb|EFW59027.1| Exodeoxyribonuclease III [Shigella flexneri CDC 796-83]
 gi|320197933|gb|EFW72541.1| Exodeoxyribonuclease III [Escherichia coli EC4100B]
 gi|323153006|gb|EFZ39275.1| exodeoxyribonuclease III [Escherichia coli EPECa14]
 gi|323158544|gb|EFZ44559.1| exodeoxyribonuclease III [Escherichia coli E128010]
 gi|323166246|gb|EFZ52021.1| exodeoxyribonuclease III [Shigella sonnei 53G]
 gi|323175176|gb|EFZ60790.1| exodeoxyribonuclease III [Escherichia coli LT-68]
 gi|323180528|gb|EFZ66073.1| exodeoxyribonuclease III [Escherichia coli 1180]
 gi|323186233|gb|EFZ71585.1| exodeoxyribonuclease III [Escherichia coli 1357]
 gi|323378375|gb|ADX50643.1| exodeoxyribonuclease III [Escherichia coli KO11]
 gi|323937007|gb|EGB33287.1| exodeoxyribonuclease III [Escherichia coli E1520]
 gi|323940585|gb|EGB36776.1| exodeoxyribonuclease III [Escherichia coli E482]
 gi|323962060|gb|EGB57657.1| exodeoxyribonuclease III [Escherichia coli H489]
 gi|323974008|gb|EGB69179.1| exodeoxyribonuclease III [Escherichia coli TA007]
 gi|332096300|gb|EGJ01301.1| exodeoxyribonuclease III [Shigella boydii 3594-74]
 gi|332101449|gb|EGJ04795.1| exonuclease III [Shigella sp. D9]
 gi|332343470|gb|AEE56804.1| exodeoxyribonuclease III [Escherichia coli UMNK88]
          Length = 268

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|170701595|ref|ZP_02892542.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
 gi|170133507|gb|EDT01888.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
          Length = 269

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 88/286 (30%), Gaps = 56/286 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  A   + +R+ ++NI                K  T     + Q    LDAD++ LQE+
Sbjct: 20  PPAAPGGRDLRIATYNIRG-----------GYGKWHTRAAHRIAQVIHELDADVIALQEV 68

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                     P     +  +T             +     AV  +      ++  L    
Sbjct: 69  PLGGTH---APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDL---- 121

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            SF +   R A++  ++ +   I V+  HL               S S  S Q Q L   
Sbjct: 122 -SFHQREPRGALDADIDCSAGMIRVVATHLGL-------------SASERSAQVQRL--- 164

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +       +P ++ GD N         + F +       + RF +    R          
Sbjct: 165 LAAFDTGAMPVILMGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTLYPVFS 215

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +D   +     ++L+  +             R +R SDH P+  
Sbjct: 216 --LDRIWIHPG--EWLVDVNVH--------RSMRARRASDHYPLVA 249


>gi|262037433|ref|ZP_06010897.1| lpxtg cell wall surface protein [Leptotrichia goodfellowii F0264]
 gi|261748595|gb|EEY35970.1| lpxtg cell wall surface protein [Leptotrichia goodfellowii F0264]
          Length = 598

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 94/323 (29%), Gaps = 62/323 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +VS+NI   S  +G        +R       +    +    DI+ L E+G  +   K 
Sbjct: 291 LNVVSYNIENFSHVDG-------PERVKELANQVATVLQT--PDILGLIEVGDDDGQKKS 341

Query: 84  FPKNTW-----------------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNV----- 121
                                    + +               I   I  RK  V     
Sbjct: 342 EVVTAKNNVEAIVNAIKEKTGIDYGYMTVNPTDGKDGGWPEMHIRNVILYRKDRVKPVKF 401

Query: 122 ----------------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
                           +V     P     +       R+ V    E NG+ ++VL  HLK
Sbjct: 402 NQGNSQKDTEVIKKGNKVQLTYNPGRIGNNDEIWTDVRKPVIAQFEFNGQNLFVLANHLK 461

Query: 166 SFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLG 219
           S  F + +  T       S  + + Q + + +++      +     ++ GD N       
Sbjct: 462 SKRFDEKIYGTSHPVIRKSEEVRNPQGKQINNFVKNILNNDPKATVIVLGDMNDF----- 516

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                 K I+ ++ +    +   +   +         +D  ++++     +  +      
Sbjct: 517 EFSQTIKNINGDELIDTISELPVNERYSYVYQGASQTLDNIMINKKYKGQVNVDVIRINS 576

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
               D  S     SDH P+ I +
Sbjct: 577 EFTIDQGS----FSDHDPVFIQF 595


>gi|261252552|ref|ZP_05945125.1| exodeoxyribonuclease III [Vibrio orientalis CIP 102891]
 gi|260935943|gb|EEX91932.1| exodeoxyribonuclease III [Vibrio orientalis CIP 102891]
          Length = 268

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 85/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q       +D       R
Sbjct: 42  -------FPLEDVEAMGYKVYFHGQKAHYGVAMLCKKEPLSVQKGFPTDNEDHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  L + NG+K+ VL+       F       +        Q    L  ++     +  
Sbjct: 91  MIMVTLEDDNGEKVTVLN-----GYFPQGDNIGHETKFPYKRQFYSDLMTYLNDHHSNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFVDTFRQIHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  I+        + D      ++ S
Sbjct: 206 DVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAEKCIES-------DVDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|242023120|ref|XP_002431984.1| protein angel, putative [Pediculus humanus corporis]
 gi|212517335|gb|EEB19246.1| protein angel, putative [Pediculus humanus corporis]
          Length = 354

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 18/284 (6%)

Query: 24  VRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +RL+ WNI   TL    +            +     + Q     D D++ L+E+  +  +
Sbjct: 70  LRLLQWNILSQTLGVSNDNFVKTPPESLDWSLKRFYVLQEIIQNDPDVICLEEVDHFKFL 129

Query: 81  AKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                   +   +  +          +N     A+  +     V++    +L      S 
Sbjct: 130 ESALKSIGYSGKFFPKPDSPCVYVEGNNGSDGAAMFYKTSKYEVIKWETRILEVWHVQSN 189

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                ++ L  + +G +  V   HLK+           +   +L   Q + L  W+ +  
Sbjct: 190 QVGLSSI-LKDKESGIEFCVAVTHLKAK--------AGALLATLRDHQGRDLLTWLEK-I 239

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P +I GDFN + +           +D   +     +E        +       IDY
Sbjct: 240 SGGRPIIIGGDFNAEPSEPVYRTMTDNRLDLKSAYSVNGREPPYTTWKGEI---CHTIDY 296

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ++     + +  +      + I S     SDH  + +D++
Sbjct: 297 VFHSKHFIPLRLLDFPTGKTIGPERIPSLSY-PSDHFSLVVDFE 339


>gi|304413776|ref|ZP_07395220.1| exonuclease III [Candidatus Regiella insecticola LSR1]
 gi|304283867|gb|EFL92261.1| exonuclease III [Candidatus Regiella insecticola LSR1]
          Length = 271

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 79/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                   +  L         DI+ LQE   ++ +  +
Sbjct: 1   MKFVSFNINGLRAH----------------FHQLAAIITQHQPDIIGLQETKVHDDMFPL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +           +         H  +A+  K   +  +        D+      R
Sbjct: 45  AEISQY----------GYHIYYHGQKGHYGVALLIKQQPLAVRRGFPTDDADA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + + V      + V++       F       +       ++    L+ ++ Q      
Sbjct: 90  RIIMVDVATPQGNLTVIN-----GYFPQGENRNHPTKFPAKAKFYSDLQHYLEQHFTPDD 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                          L    D+   +     +  F  +  
Sbjct: 145 QLLIMGDLNICPTELDIGIGSDNQKRWLRSGKCAFLPEERDWLARLQNWGLIDTFRSKNP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +         I           D      ++ S
Sbjct: 205 ECNDQFSWFDYRSRGFDENRGLRIDLLLASAPLASRCIATGI-------DYQIRGMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+  ++
Sbjct: 258 DHAPVWSEF 266


>gi|293189928|ref|ZP_06608608.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309]
 gi|292821147|gb|EFF80094.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309]
          Length = 275

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 81/306 (26%), Gaps = 58/306 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + + N+N +                 +       + +  D D++ +QE+ +   +++
Sbjct: 2   TLTVTTVNLNGIRA---------------AHKRGFLDWLEASDTDVLLMQEVRAPEEISR 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 W   +   R+   +           +AVR+    +  +   +L   ++   +G 
Sbjct: 47  EIMGEAWESVWVPCRIKGRAG--------VGVAVRRGRAVLEGEPRLILDEAETDVDSGR 98

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                +  E     + V+  +  S       +         +  +   L   I ++    
Sbjct: 99  WLEAVVRPEGGDTPVRVVSAYFHSGEKDTPKQEAKMAHLPRIGARMAEL---IAEEAGGG 155

Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246
           +  ++ GDFN   +     +                 F                      
Sbjct: 156 ISSLVCGDFNVVRSEADIKNWKPNHNKRAGVLDEEIAFLNRWVEEGWRDTVRDLAGDVQG 215

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY        +           +         +R SDH P
Sbjct: 216 PYSWWSWRGQAFVNNAGWRIDYQYATPALGERARS-------FEIGRADEYAERFSDHAP 268

Query: 298 ISIDYD 303
           +S+ Y+
Sbjct: 269 VSVTYE 274


>gi|163843144|ref|YP_001627548.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445]
 gi|163673867|gb|ABY37978.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445]
          Length = 260

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 87/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L+ + +    DIV LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKDLPGDDSDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V+ ++L +   +D+ +  Y  S        Q L++W  ++     
Sbjct: 92  --IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEE 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249
           P V+AGD+N      +           +             N       +          
Sbjct: 144 PLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A    I  +  + +          ++ SDH P+++
Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256

Query: 301 DY 302
             
Sbjct: 257 TL 258


>gi|114570470|ref|YP_757150.1| exodeoxyribonuclease III [Maricaulis maris MCS10]
 gi|114340932|gb|ABI66212.1| Exodeoxyribonuclease III [Maricaulis maris MCS10]
          Length = 262

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 69/305 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + SWN+N                   +    +  +      D+  LQE+ +   V +
Sbjct: 2   TLTVASWNVN----------------SVKARLPNVLDWLSEAKPDVACLQEIKT---VDE 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP+            + ++        +  +A+  K+     +        D  +R   
Sbjct: 43  GFPRME-------IEDLGYNIETHGQKSYNGVAILSKHPIEELRCGLPGDESDEQARY-- 93

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +E ++   G  + V  I+L +       +  Y  +        + L+          
Sbjct: 94  ---IEAVIAAEGGPVRVASIYLPNGNPAPGPKYDYKLA------WMERLRRHAQNLLTFE 144

Query: 203 VPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++AGD+N                           ++ +        F +  D R + 
Sbjct: 145 EPLILAGDYNCIPRDSDCWDIAEWESDALALPQTRAAFRALKWLGLTEAFEQL-DGRGHQ 203

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ +    A   L                   ++ SDH PI
Sbjct: 204 YTFYDYQAGRWNKGHGIRIDHLLCSPQAADHLEGIEIHTKT-------RGKEKASDHIPI 256

Query: 299 SIDYD 303
              + 
Sbjct: 257 VGSFS 261


>gi|251791676|ref|YP_003006397.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591]
 gi|247540297|gb|ACT08918.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591]
          Length = 287

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 85/312 (27%), Gaps = 63/312 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------G 75
           +VS+NI     ++G             D   +    +   ADI+ +QE+           
Sbjct: 3   IVSYNIQYGLGRDG-----------RYDLARIADEVR--GADIICMQEVERFWQRSGMTD 49

Query: 76  SYNAVAKVFPKNTWCIFYSTERLIN---HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
               +A +  +  W    + +          R  N           +   +  +++PL  
Sbjct: 50  QPAELAALLGEYHWVYGANLDMDAGTVSSDGRVVNRRRQFGTLTLSRRPILSSRNFPLPK 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                  +  +  +E +++  G  I V + HL   C             ++L   A+   
Sbjct: 110 FGTLTQHSIQQGVLETVIDTGGGAIRVYNTHLSHLCAGT----RLPQVDAMLGIFARAPD 165

Query: 193 DWITQKKESLVP---------------FVIAGDFNRKINYLGNNDDFWKT------IDPN 231
           +          P                ++ GD N   +    +            +  +
Sbjct: 166 EGGAWCGGHPDPNSGWTEGLMPLMPQEMILMGDLNCLPDSEEYSRLVGPVSPHHGRLVRH 225

Query: 232 DSLIRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             L+          N+          ID+ ++       + +                  
Sbjct: 226 RGLMDAWVAAGQPENSGSTHPAVGGRIDHCLLTPLLGLTVRRCWVDIEN----------- 274

Query: 291 RLSDHCPISIDY 302
           + SDH P+ ++ 
Sbjct: 275 QGSDHHPLWVEL 286


>gi|257789897|ref|YP_003180503.1| exodeoxyribonuclease III Xth [Eggerthella lenta DSM 2243]
 gi|317489355|ref|ZP_07947868.1| exodeoxyribonuclease III [Eggerthella sp. 1_3_56FAA]
 gi|325832619|ref|ZP_08165417.1| exodeoxyribonuclease III [Eggerthella sp. HGA1]
 gi|257473794|gb|ACV54114.1| exodeoxyribonuclease III Xth [Eggerthella lenta DSM 2243]
 gi|316911526|gb|EFV33122.1| exodeoxyribonuclease III [Eggerthella sp. 1_3_56FAA]
 gi|325485940|gb|EGC88400.1| exodeoxyribonuclease III [Eggerthella sp. HGA1]
          Length = 285

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 73/312 (23%), Gaps = 60/312 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VSWN+N L                             LDADIV LQE          
Sbjct: 1   MRFVSWNVNGLRAVLKKGFE---------------DIVCELDADIVALQETKLQEG-QAT 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDI-------HTAIAVRKKNVRVLQQSYPLLGAKDS 136
                +  ++S      +S                          R++   +P     D 
Sbjct: 45  LDLPQYREYWSYAEKKGYSGTAIFCKEQPLQALHGLGFPHLDTEGRIVALEFPKFWFVDV 104

Query: 137 FSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           ++         +   +            L+      +      P+          L    
Sbjct: 105 YTPNAQNELARIDHRMEWDDAFRDFCKGLEEGVLP-AGVPVERPALGEGHVAISELPLTQ 163

Query: 196 TQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKE 240
             +     P V+ GDFN                           +  +     +  F   
Sbjct: 164 PGETADPKPVVMCGDFNVAHQEIDLKNPGPNRGKAGFSDEERGKFTDLLEVGFVDSFRHL 223

Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                 A      +           IDYF++       +      + +Y           
Sbjct: 224 HPDVTGAYSWWSYRFKARQTNAGWRIDYFLVSDELAPKIQSACIYDEVY----------- 272

Query: 292 LSDHCPISIDYD 303
            SDHCP+ I+ +
Sbjct: 273 GSDHCPVGIELE 284


>gi|254248843|ref|ZP_04942163.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           PC184]
 gi|124875344|gb|EAY65334.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           PC184]
          Length = 684

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 83/316 (26%), Gaps = 47/316 (14%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEM 74
            VR+VS+N+ N  +       +     R              +    + L AD++ L E+
Sbjct: 362 DVRIVSFNVFNYFNGDGHGGGFDAPDNRGAKTPAAFARQEAKIVAALRALRADVIGLMEI 421

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            +         +          R ++    R   + I  A+    + V  + ++  +   
Sbjct: 422 ANNGHGDASAIRRLAAQLGGGWRAVDPGTARLGRDAIAVALLYDSRTVEPVGRAVTVALG 481

Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----- 186
                    R  +          +   V   HLKS     +       S           
Sbjct: 482 GRH------RPPLAQTFRRIDGIRTFTVAVNHLKSKNCPHASGANLDQSDGQGCWNAART 535

Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             A  + DW+       +    ++ GD N             +T++         +    
Sbjct: 536 RAAARVADWLATSPTGIAADGVLLIGDLNSYAKEDP-----LRTLEARGYANLVVRFVGD 590

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----------------- 286
              +         +D+ +        +    F  I  +E  +                  
Sbjct: 591 AAYSYVFRGEAGNLDHALATPALAARVKAVRFWHINADEPVVLQPVPDYKTSAQRSAYYA 650

Query: 287 SRGKRLSDHCPISIDY 302
               R SDH P+ ID 
Sbjct: 651 PDAYRSSDHDPVVIDL 666


>gi|109639337|gb|ABG36534.1| exodeoxyribonuclease III [Haemophilus ducreyi]
          Length = 267

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 84/311 (27%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L         D++ LQE  +   +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIINKHQPDVIGLQEIKVADEDFPH 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +FY                 H  +A+  K   +  +        D+  R  
Sbjct: 45  QLVEHLGYHVFYH------------GQKGHYGVALLTKKQPLTIRKGFPNDTADAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +  +   + VL+       F       +    S  ++    L+ ++     +
Sbjct: 91  ---MIMAEINTDFGILTVLN-----GYFPQGENRQHETKFSAKAKFYADLQHYLETTLTA 142

Query: 202 LVPFVIAGDFNR---------------------KINYLGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N                      K ++L    ++   +     +  F   
Sbjct: 143 DNPIIIMGDMNICSTDLDIGIGEANRKRWLREGKCSFLPEEREWLNRLYHYGLVDTFRAM 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID  +         ++          D      ++
Sbjct: 203 HPTTTDQFSWFDYRSKGFNDNRGLRIDLILASTTLANHCVETGI-------DLEIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 256 PSDHAPIWAVF 266


>gi|326318344|ref|YP_004236016.1| endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375180|gb|ADX47449.1| Endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 252

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 85/288 (29%), Gaps = 53/288 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+ ++NI+           +        +   L    + LDADIV LQE+   +  
Sbjct: 10  AGILRIATYNIH--------KGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVH-R 60

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   W      E L                      A+  +   +  Q        
Sbjct: 61  RGAQHFPRWPELPQAEFLAPEGYEAVYRTNAFTRHGEHGNALLTRWPVIGHQH-----ED 115

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S  R   R  + + VE+ G+++  + +HL                     +Q   L+ +
Sbjct: 116 MSDHRFEQRGLLHVEVEVQGRRVHAIVVHLGLIPGS-------------RVRQVAQLQRF 162

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + ++     P ++AGDFN         D   +      +      E + R          
Sbjct: 163 VAREVPDGAPLLVAGDFN---------DWGQQVKHALAAFGLREYEGEPRALTYPARLPL 213

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D+  +       +                    R+SDH P+  ++
Sbjct: 214 VQLDHVYVRG-----MEPMGLHVPRGRI------WWRMSDHLPLIAEF 250


>gi|153876175|ref|ZP_02003628.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS]
 gi|152067361|gb|EDN66372.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS]
          Length = 253

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 82/302 (27%), Gaps = 74/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      L  +  N   DI+ LQE+         
Sbjct: 2   LKIATWNVNSL----------------RVRLPHLLDWLSNHQPDIIALQEI--------- 36

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +           +           R
Sbjct: 37  -KVMDEQFPLAEIEAAGYHALFAGQKTYNGVALLSRKP------GNDIITDFPDFNDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +    +    K+ +L++++ +   +DS +  Y        +    L+++I    +   
Sbjct: 90  RFLGATYD----KLRILNVYVPNGASVDSDKYQYK------LEWLTQLQNYICDNLKQYP 139

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
             ++ GDFN         D      K +             +  L    +  +    +  
Sbjct: 140 RLIVLGDFNIAPEDQDVYDPIAWAGKILVSPPERTALQNLLHLGLKDTFRLFEQPVASFS 199

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID  +                     D    R +R SDH P+  
Sbjct: 200 WWDYRRGAFLRNHGIRIDLILASTAL---------HCTGCTIDTAPRRLERPSDHAPVVA 250

Query: 301 DY 302
            +
Sbjct: 251 TF 252


>gi|261253090|ref|ZP_05945663.1| hypothetical protein VIA_003115 [Vibrio orientalis CIP 102891]
 gi|260936481|gb|EEX92470.1| hypothetical protein VIA_003115 [Vibrio orientalis CIP 102891]
          Length = 316

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 101/308 (32%), Gaps = 29/308 (9%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            + +   + N+    +        ++    +   +     +     LDADI+ LQE+ S 
Sbjct: 4   TKTLTFATANLFNFLKPPDAFYEFSNIYGQEEWQAKCQWTKSQINKLDADIIGLQEVFSI 63

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            AV ++  +  +  ++ T            +    A+A +   +            K   
Sbjct: 64  EAVQQLLAECGFP-YFVTVDKPKSESDYIYSRPVVALASKYPILHAEAVKPLKEPVKAYQ 122

Query: 138 S--RAGNRRAVELLVEING-KKIWVLDIHLKS-------FCFLDSLENTYSPSCSLLSQQ 187
                 +R+ +  ++++    ++ V   HLKS           +S       S  L   +
Sbjct: 123 IELPEFSRKPIHAVIKVPTVGEVAVYVCHLKSQRATEPTLKGEESQLLGQWLSSQLRGWE 182

Query: 188 AQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWK--------TIDPNDSLIRFP 238
           +  L+ ++  Q ++S  P  + GD N+ +          +         +  +  + +  
Sbjct: 183 SMMLRLYMDKQYQKSPRPTALLGDMNQPLTSDITGLLTQRADEEGEALVLTDSWLVYKHA 242

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRL 292
               +R   + +      +DY ++ Q       +       Y   D         R K+ 
Sbjct: 243 AISPARAATHYHFSKGNVLDYVILSQEFQPDSQRSIAEVSRYLVQDQHLINPIYDRDKQA 302

Query: 293 SDHCPISI 300
           SDH  +++
Sbjct: 303 SDHAFVAV 310


>gi|298207113|ref|YP_003715292.1| hypothetical protein CA2559_02630 [Croceibacter atlanticus
           HTCC2559]
 gi|83849747|gb|EAP87615.1| hypothetical protein CA2559_02630 [Croceibacter atlanticus
           HTCC2559]
          Length = 359

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/359 (11%), Positives = 87/359 (24%), Gaps = 66/359 (18%)

Query: 1   MIRKYVLALVF-FLVPC-TASVAQK------------VRLVSWNINTLSEQEGVSLW--- 43
           M  K  + L+      C ++ VA              + +  +N+  L + E  +     
Sbjct: 1   MKTKITIFLIACLAFSCGSSKVATTESKVSTEKKYNVLTVAFYNLENLFDTEDDTEKNDE 60

Query: 44  --------KNSVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNT 88
                    +  +   S    + +    + AD       IV L EM +   +  +  +  
Sbjct: 61  ASPIMEMQNDREQAYQSKLANMAKVISEIGADVAKNSPAIVGLCEMENRKVLEDLVNQP- 119

Query: 89  WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ---QSYPLLGAKDSFSRAGNRRA 145
                     I H        I  A+  +K   ++         +    D   R   R  
Sbjct: 120 --GLVEKNYGIAHYDSPDRRGIDVALLYQKDLFKLQSATNHELLIYDNNDPEKRVYTRDQ 177

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           + +   ++G ++  +  H  S    ++         + L++        +    +     
Sbjct: 178 LLVTGLLDGDEMNFIVNHWPSRSGGEARSRYKREKAAALNKSIIDSLQAVNPYAK----I 233

Query: 206 VIAGDFNRKINYLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           +  GD N                    ++  D                         D  
Sbjct: 234 ITMGDLNDDPTNTSVTKVLGAKDEKENLETKDLYNPMMDLFKQGIGTLAYRDGWNLFDQM 293

Query: 261 VMDQNAYK------FLIQESFSEILYNEDDIKSRGKRL-------------SDHCPISI 300
           +M +             +       Y  +                      SDH P+ +
Sbjct: 294 IMSKPLLDEDFSSYRFYKVGIYNKNYLANPRGRYKGYPFRSWSDGGFTNGFSDHFPVYV 352


>gi|289663812|ref|ZP_06485393.1| nuclease [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 1195

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 92/340 (27%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHMPDIL 637

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120
              E+ + + +  +  +       S +    +     + +    I     V+        
Sbjct: 638 GTVEVENISVLQALAARVNADAVASGQSNPQYVAYLQEGNDVGGIDVGFLVKTADIAGGV 697

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168
            RV   S    G   +++           R  + L   ++        +  + +H +S  
Sbjct: 698 PRVEVLSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTANVHQVDGRTLPLTAIVVHQRSLN 757

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225
             ++ +   +   +    QA++L   +   Q+       ++ GDFN      G  D    
Sbjct: 758 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 817

Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + ++   +
Sbjct: 818 VTGKPAPDAQTVVGGDGADLVNTDYTDLTWFTTPDQSYSYAFDGNVQSLDHILANEALMR 877

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 878 SPQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917


>gi|296313346|ref|ZP_06863287.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768]
 gi|296840163|gb|EFH24101.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768]
          Length = 256

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++    +   DI+ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNLLADNPPDILVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++V              S      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAIISRSVPQDVHF-----GLPSLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATV----GGVRVINVYCVNGEALDSPKFKYKE------QWFAALTEFVRDEMTRYG 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++ +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P++
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDV-------RVDLDTRALERPSDHAPVA 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|255066148|ref|ZP_05318003.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256]
 gi|255049693|gb|EET45157.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256]
          Length = 256

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 86/304 (28%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     ++ +  +   D++ LQE          
Sbjct: 1   MKITTWNVNSLN----------------VRLPQVQNWLADHQPDVLVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +  +++      S    +  +A+  ++               +      R
Sbjct: 35  LKLDQDKFPAAALQMMGWHSVWSGQKTYNGVAIISRSEPQDVHV-----GLPTLPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V++++  +   LDS +  Y        Q    L +++  +     
Sbjct: 90  RVIAATVN----GVRVINVYCVNGEALDSPKFLYKE------QWFAALTEFVRDEMTRYE 139

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                ++K +          +         
Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRQIHPEGAF-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++       L            D      +R SDH P+ 
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHQLISPALSAVLKDVYV-------DLDARAQERPSDHAPVV 251

Query: 300 IDYD 303
            ++D
Sbjct: 252 AEFD 255


>gi|152979045|ref|YP_001344674.1| exodeoxyribonuclease III [Actinobacillus succinogenes 130Z]
 gi|150840768|gb|ABR74739.1| exodeoxyribonuclease III [Actinobacillus succinogenes 130Z]
          Length = 266

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 86/312 (27%), Gaps = 78/312 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L Q       DI+ LQE  +       
Sbjct: 1   MKVISFNINGL----------------RARPHQLEQIIDIHRPDILGLQEIKVADEQFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F+                 H  +A+  K      +      ++++     
Sbjct: 45  EIVADLGYHVFHY------------GQKGHYGVALLTKQEPKAVRRGFPTDSEEA----- 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            RR +    + +   + V++       F       +       ++    L+ ++ +    
Sbjct: 88  QRRIIMADFDTDFGSLTVIN-----GYFPQGESRAHETKFPAKAKFYADLRRYVAEDLPC 142

Query: 202 LVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKE 240
               VI GD N     L                         ++++ +        F K 
Sbjct: 143 DN-VVIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWYQHLYDLGLEDTFRKL 201

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ + +    +   +          D      ++
Sbjct: 202 NPTASDKFSWFDYRSKGFNENRGLRIDHILANTKLAEHCTETGI-------DLTIRAMEK 254

Query: 292 LSDHCPISIDYD 303
            SDH PI   + 
Sbjct: 255 PSDHAPIWAVFS 266


>gi|325474697|gb|EGC77883.1| endonuclease/exonuclease/phosphatase [Treponema denticola F0402]
          Length = 342

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 103/342 (30%), Gaps = 59/342 (17%)

Query: 4   KYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSE--QEGVSLWKNSVKRTTS 52
              +   F L  CT              ++ +VS+N  T  +  ++G    +    +T  
Sbjct: 14  SIFICFCFILCACTGCTNVFRLQNIGKDEISIVSYNAQTFFDAVEDGREFKEFKGSKTKW 73

Query: 53  DYTLLRQYAKNLD-----------------ADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95
                 +    L                   DI+ LQE+ S   +            Y  
Sbjct: 74  SKEKYAERLFRLKEAVNLSCLALGLGEKAIPDILVLQEIESRAVIDDFCKILPMNNSYKY 133

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-- 153
              I      + +      A+  K      + + +   K S      R  +E  + I   
Sbjct: 134 AVFIPPQNGGAFS-----TALLSKFPITETKVFNIYSGKRS-----LRPLIETRIRIGNS 183

Query: 154 --GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
               ++ +L++H KS       ++          ++ + LK       E   PF+I GDF
Sbjct: 184 TGDNELVLLNVHWKSKVGDSDTDSIRRQQEEQAYKRLKELKA-----SEPQTPFIICGDF 238

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--- 268
           N+ +       +F    +  ++     +E +    +     +   ID+F    N      
Sbjct: 239 NQTLEEFSLLSEFDNCWN-IEAYRAAAQEGNQPEGSYFYKESWEGIDHFFYSDNLSDGKN 297

Query: 269 -------FLIQESFSEILYNEDDIKSR-GKRLSDHCPISIDY 302
                   +  +  ++     D      GK  SDH PI I  
Sbjct: 298 FDLSFFCVINLKPLTDTSGKPDKYSVYSGKGYSDHLPIGIIL 339


>gi|265752690|ref|ZP_06088259.1| metallophosphoesterase [Bacteroides sp. 3_1_33FAA]
 gi|263235876|gb|EEZ21371.1| metallophosphoesterase [Bacteroides sp. 3_1_33FAA]
          Length = 247

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 81/309 (26%), Gaps = 71/309 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +  L   L   +A     +RL+++NI   +  + V            D+  +    
Sbjct: 1   MKKTLPLLFILLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 49

Query: 62  KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            ++  ++V LQE+ S          + ++  +     +++             +     I
Sbjct: 50  NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 101

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  K + V  ++  L G      R   R  +    +                   +   
Sbjct: 102 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 148

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                           L+           PF +AGD N +                    
Sbjct: 149 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 185

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             F    D   +          IDY    +   K     S   +              SD
Sbjct: 186 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 236

Query: 295 HCPISIDYD 303
           H P+ I  +
Sbjct: 237 HRPLVIVLE 245


>gi|88799886|ref|ZP_01115458.1| predicted extracellular nuclease [Reinekea sp. MED297]
 gi|88777317|gb|EAR08520.1| predicted extracellular nuclease [Reinekea sp. MED297]
          Length = 851

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 89/334 (26%), Gaps = 56/334 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT------TSDYTLLRQYAKNLDADIVFL 71
           A    ++R+ S+N+      +G      + +              L      ++AD++ L
Sbjct: 442 AVAESELRVASFNVLNFFNGDGQGGDFPTPRGANDVYELERQTAKLVSAITAINADVIGL 501

Query: 72  QEMGSYNAVAK-------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV--- 121
            E+ +                     +  + + +I +     ++DI   +  R   V   
Sbjct: 502 MEIENDGFGELSAIAELTAAINAELPVEDAYQYVIPNVDLIGDDDIAVGMLYRPSVVSPV 561

Query: 122 ----RVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                +  QS PL    +  F    NR A+   V++      +  +        +S  + 
Sbjct: 562 GQATILDSQSSPLDDQGEPLFIDDLNRPALAQSVQLTNSDTVMTVVVNHFKSKGNSNCDD 621

Query: 177 YSPSCSLLSQQAQWLKDWITQKKE---------SLVPFVIAGDFNRKINYLGNNDDFWKT 227
           YS                     +              +I GD N              T
Sbjct: 622 YSDCDQGQGAYNVARTKAAQALAQWLASGPTGVETDHVMILGDLNAYSQEDP-----LTT 676

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +  N       ++                +D+ +        ++      I  +E  +  
Sbjct: 677 LMENGYQRLQTEDG----YTYVYSGETGTLDHALATGPLSSNVVGVQQWHINTDEPRVLD 732

Query: 288 RG-----------------KRLSDHCPISIDYDF 304
                               R SDH P+ +D+ F
Sbjct: 733 YNTEYKTESQILGFYAPDAYRSSDHDPVIVDFAF 766


>gi|292488442|ref|YP_003531324.1| exonuclease III [Erwinia amylovora CFBP1430]
 gi|291553871|emb|CBA20916.1| Exonuclease III [Erwinia amylovora CFBP1430]
          Length = 301

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 87/313 (27%), Gaps = 73/313 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L+   +    D++ LQE       
Sbjct: 31  APAMKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVH 71

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP        +    + +         H  +A+  K   V  +       +D+    
Sbjct: 72  DDMFP-------LAEVASLGYHVFYHGQKGHYGVALLCKQQPVAVRRGFASDDEDA---- 120

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +      + V++       F       +        +  + L  ++ Q+++
Sbjct: 121 -QRRIIMADIMTPSGLLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLHSYLEQQQK 174

Query: 201 SLVPFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPK 239
                +I GD N                        ++L    ++   +     +  +  
Sbjct: 175 PDNQLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFLPEEREWMDKLMNWGLVDTWRA 234

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           +  +  +       +           ID  +  +      +           D      +
Sbjct: 235 QHATINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADRCVATGI-------DYDIRAME 287

Query: 291 RLSDHCPISIDYD 303
           + SDH PI  ++ 
Sbjct: 288 KPSDHAPIWAEFS 300


>gi|152968141|ref|YP_001363925.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216]
 gi|151362658|gb|ABS05661.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216]
          Length = 266

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 65/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  +    D D+V LQE    +     
Sbjct: 1   MRLATWNVN----------------SVRARLDRVLAWIDRSDVDVVALQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +            +A+  +   +   S         F      
Sbjct: 41  ------QFPEQAFRDLGYEVAHHGLSQWNGVALLSRVG-LEDVSTAFSPDVPRFGEPPVV 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  +     G  + V  +++ +   L+     Y        ++A   + W+ Q  +   
Sbjct: 94  EARAVGALCGG--VRVWSLYVPNGRGLEDPHYPYKLEWLERLREAG--RGWLAQ--DPAA 147

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GDFN                           +  +                    
Sbjct: 148 QVALVGDFNIAPTDEDVWDPEAFAGATHVSAPERAAFTALVEAGFADVVRPHAPGP-GTY 206

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                          + ID+ +        +   +        D  + +GK  SDH P+ 
Sbjct: 207 TYWDYQQLRFAKRQGMRIDFVLGSPALAARVSGATI-------DREERKGKGASDHAPVV 259

Query: 300 IDY 302
           ++ 
Sbjct: 260 VEL 262


>gi|262203673|ref|YP_003274881.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
 gi|262087020|gb|ACY22988.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
          Length = 293

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 79/304 (25%), Gaps = 69/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  +      D+V LQE        K+
Sbjct: 1   MRVATWNVN----------------SVKQRIPRLLPWLDERRPDVVCLQE-------TKL 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGN 142
             +    +  +      ++           +A+  K       + +  +      +    
Sbjct: 38  SDEAFHDVLGADLAERGYAIAHHGQGQWNGVALLSKVGLDDVTTGFDDMPGYPDPATLEA 97

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +        + +  +++ +    DS    Y             L   I++   + 
Sbjct: 98  RAVSAVC-----GGLRIYSLYVPNGRVPDSDHYRYK------LTWLAALAKSISEPSST- 145

Query: 203 VPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
              ++ GD N         D                  +      L    +++       
Sbjct: 146 ---LLCGDMNIAPADADVFDPDAYVGHTHVTEPERAALSAFAELGLHDVVRDRWPDSRVF 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +  ++A   +            D    +G + SDH P+ 
Sbjct: 203 SYWDYRAGMFHKDLGMRIDLILAGESATDRVAAAWV-------DRKARKGTKPSDHAPVI 255

Query: 300 IDYD 303
           +D D
Sbjct: 256 VDLD 259


>gi|170727269|ref|YP_001761295.1| exonuclease III [Shewanella woodyi ATCC 51908]
 gi|169812616|gb|ACA87200.1| exodeoxyribonuclease III [Shewanella woodyi ATCC 51908]
          Length = 268

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 91/309 (29%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN                   +    L+    +   DI+ LQE  +++ V   
Sbjct: 1   MKIVSFNING----------------IRARLHQLQALIDSHQPDIIGLQETKAHDDV--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   V  Q       +D    A  R
Sbjct: 42  -------FPVADVEAMGYKVHYHGGKAHYGVAMLSKLEPVKVQKGFPTDGED----AQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + VL+       F      ++        Q  + L  ++ +   +  
Sbjct: 91  MIMGTFTQENGRPLTVLN-----GYFPQGENISHETKYPAKRQFYKDLMIYLNEHHSADE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              + GD N                        ++     ++ KT+     L  F +   
Sbjct: 146 DIAVIGDINISPIDLDIGIGEPNAKRWLKTGKCSFQPEEREWLKTLMDWGLLDTFRELHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R +       +           ID  +  ++    L++        + D      ++ S
Sbjct: 206 ERVDRYSWFDYRSKGFDDNRGLRIDVVLATKSLADRLVES-------DVDYDLRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSSF 267


>gi|300868692|ref|ZP_07113303.1| exodeoxyribonuclease III [Oscillatoria sp. PCC 6506]
 gi|300333253|emb|CBN58495.1| exodeoxyribonuclease III [Oscillatoria sp. PCC 6506]
          Length = 261

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 87/305 (28%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   S    + ++ +    D++ LQE    +     
Sbjct: 1   MKIATWNVN----------------SIRSRLEQVLEWLQANPVDVLCLQETKVID----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--PLLGAKDSFSRAG 141
                          I ++   S    +  +A+  +       +   P+LG         
Sbjct: 40  -----QDFPLQPFLDIGYNFYISGQKSYNGVAIFSRLPMTDISTGFAPILGTDIVGEFDE 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +R +  ++      I ++++++ +   + S +  Y           + L++++    + 
Sbjct: 95  QKRLITGII----ADIRIVNLYIPNGSEVGSEKYNYK------LNWLKLLQEYLKIIIDK 144

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                + GDFN   +    +                   + I        F    D   +
Sbjct: 145 SPNLCVCGDFNIAPDDRDIHNPKAFKNQIMASPAERQALQEIVALGFSDAFRIFTDEGGH 204

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  +  +        +        D    +  + SDH P
Sbjct: 205 -FSWWDYRTGGFRHNRGWRIDHHYLSLSLCDRAKSCTI-------DKTPRQLTKPSDHAP 256

Query: 298 ISIDY 302
           + ++ 
Sbjct: 257 VIVEI 261


>gi|159037346|ref|YP_001536599.1| exodeoxyribonuclease III Xth [Salinispora arenicola CNS-205]
 gi|157916181|gb|ABV97608.1| exodeoxyribonuclease III Xth [Salinispora arenicola CNS-205]
          Length = 265

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 75/302 (24%), Gaps = 71/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    L  +    + D+V LQE    +     
Sbjct: 1   MRLATWNVN----------------SVKARLPRLLDWLAGTEPDVVCLQETKCPDGA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + ++    ++     +A+  +              +  F     R
Sbjct: 42  -------FPVAEVGALGYTVASHSDGRWNGVAILSRVGLTEVTVG--FPGEPGFPDPEAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+          + V  +++ +    D     Y  +          L+D +  +     
Sbjct: 93  -ALAATC----AGLRVWSVYVPNGRTPDDPHYAYKLA------WLGALRDALEVELTGGP 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P  + GDFN         D                    +         P       +  
Sbjct: 142 PLAVCGDFNVAPTDADVWDPALFTGSTHVTPAERVALSALRDLGLADVVPTPMKGP-HPF 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID         + +            D    +GK  SDH PI 
Sbjct: 201 TYWDYRAGMFHQNKGMRIDLVYASAPFTRAVRAAYV-------DREARKGKGPSDHAPIV 253

Query: 300 ID 301
           +D
Sbjct: 254 VD 255


>gi|295110263|emb|CBL24216.1| exodeoxyribonuclease III [Ruminococcus obeum A2-162]
          Length = 253

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 88/307 (28%), Gaps = 82/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                           K L+AD+  LQE        ++
Sbjct: 1   MKLISWNVNGIRACITKGFEDR---------------FKELNADVFCLQETKCQQGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +N   ++  AV  K   +   +                
Sbjct: 46  -ELPGYHQYWN----------YANRRGYSGTAVFTKKEPLSVVNG--------------- 79

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201
               + +E + K+  V+ +  + F F+             L  + +W +D++    +   
Sbjct: 80  ----IGIEAHDKEGRVITLEFEEFYFVTVYTPNSQSELRRLEYRMEWERDFLAYLLKLQE 135

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P +  GD N                           +  +  +  +  F      +  
Sbjct: 136 KKPVICCGDMNVAHQEIDLKNPKTNRKNAGFTDEERACFSRMLESGFVDTFRYFYPDKEG 195

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF++  +    L   S    +             SDHCP
Sbjct: 196 IYSWWSYRFKAREKNAGWRIDYFIVSPSLKDRLQDASIHTEI-----------MGSDHCP 244

Query: 298 ISIDYDF 304
           + +D DF
Sbjct: 245 VELDIDF 251


>gi|227822472|ref|YP_002826444.1| hypothetical protein NGR_c19280 [Sinorhizobium fredii NGR234]
 gi|227341473|gb|ACP25691.1| hypothetical protein NGR_c19280 [Sinorhizobium fredii NGR234]
          Length = 368

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 106/366 (28%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLLRQY------------ 60
            +RL ++NI  L  +   S ++N +K          R+ ++Y  L +             
Sbjct: 2   SLRLATFNIENLLSRFDFSGFRNQLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDTRQM 61

Query: 61  ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                 + DADI+ LQE  +  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  SALAIADCDADILCLQEADNMAALQAFEYGYLFRMVGNGYRQKYLIEGNDSRGIDVAVLM 121

Query: 117 RK------KNVRVLQQSYPLLGAKDSF-------------SRAGNRRAVELLVEINGKKI 157
           R+      +   +  +S+  L  +D                R   R  +E+ + I G+ +
Sbjct: 122 REETRDGQRIECLEVKSHATLTYEDLDLFNEELALTNRPRDRIFKRDCLEVDLRIGGRPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFNR 213
            +  +H KS        +    + +L + +A+ ++  I  +          F I GD N 
Sbjct: 182 TLYVVHFKSMGPARDGLDGRRATMALRAAEAKAVRHVIESRFGRGHTADKMFAICGDMND 241

Query: 214 KIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255
                              +                     +          + R     
Sbjct: 242 YQEKVVILGDRRNGYEFVPHEEEVSALDILSHDGFVENPMSRRPVLDRWTLFHSRGPEER 301

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILY---------------NEDDIKSRGKRLSDHCP 297
               +DY  +     +         +                           + SDHCP
Sbjct: 302 HLCQLDYIWLSPALARRNSSRVPEIVRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 LVMTLD 367


>gi|74317491|ref|YP_315231.1| hypothetical protein Tbd_1473 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056986|gb|AAZ97426.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 273

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 80/282 (28%), Gaps = 52/282 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
                + S+NI+     +              D   +    ++LD D + LQE+ S    
Sbjct: 7   GHSFSVASYNIHQCVGVDR-----------RRDAARIATVIRDLDCDAIGLQEVDSRAGP 55

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                +  +    +  + +        +D     A+  +   +  + + L     SF   
Sbjct: 56  HADSKQLEYLAEATGMQALA-GPTILRHDGDYGNALLTRRPILAVRRHDL-----SFRSR 109

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+++ ++++G ++ V+  HL                 +    Q + L   +    E
Sbjct: 110 EPRGALDVDLDVHGHRVRVIVTHLGLRP-------------AERRYQVKLLLKLL-HPVE 155

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P V  GD N  +            +                      L     +D  
Sbjct: 156 PGQPVVALGDINEWLPLSRPLRWMHGLL-----------GPPPWQRTFPTLLPMFALDRV 204

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +  ++           ++      +   +  SDH P+    
Sbjct: 205 WVRPHSA----------LVDLRAHRRKPARMASDHYPLRAVI 236


>gi|15641862|ref|NP_231494.1| exonuclease III [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121587322|ref|ZP_01677094.1| exodeoxyribonuclease III [Vibrio cholerae 2740-80]
 gi|147674047|ref|YP_001217394.1| exonuclease III [Vibrio cholerae O395]
 gi|153820118|ref|ZP_01972785.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457]
 gi|227081989|ref|YP_002810540.1| exodeoxyribonuclease III [Vibrio cholerae M66-2]
 gi|229508043|ref|ZP_04397548.1| exodeoxyribonuclease III [Vibrio cholerae BX 330286]
 gi|229511718|ref|ZP_04401197.1| exodeoxyribonuclease III [Vibrio cholerae B33]
 gi|229518856|ref|ZP_04408299.1| exodeoxyribonuclease III [Vibrio cholerae RC9]
 gi|229607590|ref|YP_002878238.1| exonuclease III [Vibrio cholerae MJ-1236]
 gi|254848946|ref|ZP_05238296.1| exonuclease III [Vibrio cholerae MO10]
 gi|255745380|ref|ZP_05419329.1| exodeoxyribonuclease III [Vibrio cholera CIRS 101]
 gi|262153517|ref|ZP_06028646.1| exodeoxyribonuclease III [Vibrio cholerae INDRE 91/1]
 gi|262167417|ref|ZP_06035124.1| exodeoxyribonuclease III [Vibrio cholerae RC27]
 gi|298498101|ref|ZP_07007908.1| exodeoxyribonuclease III [Vibrio cholerae MAK 757]
 gi|9656389|gb|AAF95008.1| exodeoxyribonuclease III [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121548482|gb|EAX58540.1| exodeoxyribonuclease III [Vibrio cholerae 2740-80]
 gi|126509336|gb|EAZ71930.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457]
 gi|146315930|gb|ABQ20469.1| exodeoxyribonuclease III [Vibrio cholerae O395]
 gi|227009877|gb|ACP06089.1| exodeoxyribonuclease III [Vibrio cholerae M66-2]
 gi|227013758|gb|ACP09968.1| exodeoxyribonuclease III [Vibrio cholerae O395]
 gi|229343545|gb|EEO08520.1| exodeoxyribonuclease III [Vibrio cholerae RC9]
 gi|229351683|gb|EEO16624.1| exodeoxyribonuclease III [Vibrio cholerae B33]
 gi|229355548|gb|EEO20469.1| exodeoxyribonuclease III [Vibrio cholerae BX 330286]
 gi|229370245|gb|ACQ60668.1| exodeoxyribonuclease III [Vibrio cholerae MJ-1236]
 gi|254844651|gb|EET23065.1| exonuclease III [Vibrio cholerae MO10]
 gi|255737210|gb|EET92606.1| exodeoxyribonuclease III [Vibrio cholera CIRS 101]
 gi|262024114|gb|EEY42808.1| exodeoxyribonuclease III [Vibrio cholerae RC27]
 gi|262030644|gb|EEY49279.1| exodeoxyribonuclease III [Vibrio cholerae INDRE 91/1]
 gi|297542434|gb|EFH78484.1| exodeoxyribonuclease III [Vibrio cholerae MAK 757]
          Length = 268

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L+        D++ LQE  +       
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A+  K   V      + G         
Sbjct: 45  QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDNEEHQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    + NG+K  +L+       F       +        Q  + L  ++ + + +
Sbjct: 89  KRMIMATFADQNGQKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
               V+ GD N                        ++     ++ +T+     +  F + 
Sbjct: 144 SERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +      +   +          D       +
Sbjct: 204 HPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDK 256

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 257 PSDHAPIWTTF 267


>gi|292609568|ref|XP_697426.2| PREDICTED: nocturnin-like isoform 2 [Danio rerio]
          Length = 378

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 80/289 (27%), Gaps = 10/289 (3%)

Query: 23  KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78
            +R++ WN+    L E  +                 ++ +       DI+ LQE+  Y +
Sbjct: 84  TIRVMQWNVLAQALGEGMDNFVQCPLDALNWPERKYMILEEILTYKPDILCLQEVDHYFD 143

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               V     +   +  +        ++NN               L  +  L  +     
Sbjct: 144 MFQPVLATLGYQSSFCPKPWSPCLDVENNNGPDGCALFFNHKRFQLVNTTHLRLSAMMLK 203

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                    L     G+   V   HLK+    + L +          +      +   + 
Sbjct: 204 TNQVAIVAALRCRSTGRVFCVGVTHLKARSGWEVLRSAQGSDLLRNLRNITQKIET-EEN 262

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--- 255
            ES +P ++ GDFN + +     +    ++  + +      +  +               
Sbjct: 263 AESAIPLIVCGDFNAEPSEDVYRNFATSSLGLDSAYKLLSTDGKTEPPYTTWKIRPSGES 322

Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +DY      A+       F        +        SDH  +  D+
Sbjct: 323 CHTLDYVWYSHRAFDVNAVLDFPTAEQIGPNRLPSYNYPSDHLSLVCDF 371


>gi|310814721|ref|YP_003962685.1| exodeoxyribonuclease III [Ketogulonicigenium vulgare Y25]
 gi|308753456|gb|ADO41385.1| exodeoxyribonuclease III [Ketogulonicigenium vulgare Y25]
          Length = 259

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 82/303 (27%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN                   +    + ++      D+   QE+ S   V + 
Sbjct: 1   MRIATYNING----------------IKARLETVTEWLTRESPDVAIFQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       S    + ++           +A+  K            G     +   +R
Sbjct: 42  FPR-------SAIEDLGYNLETHGQKGFNGVAIASKLPMEDVTR----GLPGDDNDEQSR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++      + +  ++L +       +  Y  +        + L         S  
Sbjct: 91  WIEATVI--GKTAVRICGLYLPNGNPAPGPKYDYKLA------WMERLHKRAEALLASEE 142

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P  +AGD+N                         D ++ I        F        + +
Sbjct: 143 PAFMAGDYNVIPQAEDAKNPAEWLEDALYLPQTRDAFRRILNLGFTDAFRAITQGPGHYS 202

Query: 249 KN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+F++       L                   ++ SDH P+ +
Sbjct: 203 FWDFQAGAWQRDNGIRIDHFLLTPQCADLLQNAWIE-------KDARGREKPSDHVPVWV 255

Query: 301 DYD 303
           + D
Sbjct: 256 ELD 258


>gi|282874729|ref|ZP_06283608.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis SK135]
 gi|281296445|gb|EFA88960.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis SK135]
          Length = 327

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ + N+  L      +++ N  +   +D      Y +  + D+V L E+    A  
Sbjct: 35  DSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKASK 88

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133
           ++  +      Y T  +   ++   N              + +  K   V Q+ + +   
Sbjct: 89  RLSTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGGVGIVSKWPIVQQEQH-IYKK 147

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 AGN+    + +  NGK   ++  HL++    +           +   Q   +K 
Sbjct: 148 GCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMSEIKQ 203

Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +I  +      P  I GD N  I            ++ +              ++N   +
Sbjct: 204 FIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIAK 262

Query: 253 N------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                     +DY ++D++  +     + +  + + +       +       SDH P+S
Sbjct: 263 YNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 321


>gi|88802681|ref|ZP_01118208.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           irgensii 23-P]
 gi|88781539|gb|EAR12717.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           irgensii 23-P]
          Length = 329

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 90/294 (30%), Gaps = 27/294 (9%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS-----DYTLLRQYAKNLDADIVFLQEMGS 76
              +++SWN+    +        +  +             L    + +DA +V LQE  S
Sbjct: 49  DSFKVLSWNVAHFVDSFDDPYIDSKRENQPDSLMGNKVASLVVALRRIDAAVVVLQEFES 108

Query: 77  YNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPLL 131
              +  +  ++     +  F        +      +     I     NV   +  +    
Sbjct: 109 AKFLRSLANEHLQDMGYKYFADVPSHGWYMNVVMMSKFPLGIIYGYGNVTTPVLGASIAS 168

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           GA ++ +    R     +         +  +HLK+             + ++   Q  +L
Sbjct: 169 GATETQNTLNTRMWSIDVYPSPNYNFLLTGVHLKAG--------RGERNVAMRKGQINFL 220

Query: 192 KDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           K    +   ++     ++ GDFN        N    +       +   P         + 
Sbjct: 221 KQQFKRFLKEDKNKNILVLGDFNSVQGSEEINLFLQEKNKREKFIDPLPDSAM----THT 276

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +   K  +DY +++ N YK     S                 +SDH P++I++ 
Sbjct: 277 SDAPKRRLDYVLINTNMYKEYKVGSAKVSSLFSPLKMRE---ISDHLPVTINFT 327


>gi|332969618|gb|EGK08636.1| exodeoxyribonuclease III [Kingella kingae ATCC 23330]
          Length = 256

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 89/301 (29%), Gaps = 73/301 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WN+N+L+                     +  +      D++ LQE+         
Sbjct: 1   MNITTWNVNSLN----------------VRLPHVSNWLSQHQPDVLVLQELKLEQD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  +++      S    +  +A+  ++     Q+        +      R
Sbjct: 41  ------KFPAAALQMMGWQCAWSGQKTYNGVAIISRHAIEDVQT-----GLPALPDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++++  +   L+S +  Y        Q    L  W+ ++ +   
Sbjct: 90  RVISATIN----GVRVINVYCVNGESLESDKFVYKR------QWFAALTQWVREQMQQYD 139

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN         D                +++T+          +   +  +  
Sbjct: 140 KLVLLGDFNIAPADDDVYDPEKWREQIHCSSEERAWFQTLLDLGLTDCLRQIHPTGVH-Y 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +  Q+    L            D  +   +R SDH P+S
Sbjct: 199 TWFDYRGAMFQRKLGLRIDHILASQSLASSLHDV-------RVDLEERAQERPSDHAPVS 251

Query: 300 I 300
            
Sbjct: 252 A 252


>gi|222148978|ref|YP_002549935.1| exonuclease III [Agrobacterium vitis S4]
 gi|221735964|gb|ACM36927.1| exonuclease III [Agrobacterium vitis S4]
          Length = 264

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 68/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ ++   DIV LQE+ S   V + 
Sbjct: 1   MKIATWNING----------------VKARLANLCQWLESSSPDIVCLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +    + +            +A+  K               D  +R    
Sbjct: 42  FPR-------AEIEALGYHVETHGQKGFNGVALLSKIRPDEVNRGLPGDEADEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +  +    + V  ++L +    D                   L+ +   +     
Sbjct: 92  --IEGVFSVADGVLRVCSLYLPNGNPSDDPVK-----YPYKLAWMARLQRFAADRLALEE 144

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N   +               +L      ++ ++ N  L    +         
Sbjct: 145 PLILAGDYNVIPHPHDCFDPAVWATDALFLPQTRAAFQALE-NLGLTDAVRATTDATKLY 203

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L+     + +          ++ SDH P+ 
Sbjct: 204 SFWDYQAGAWQKNNGIRIDHLLLSAEATDRLVSTEIEKHV-------RSWEKPSDHVPVI 256

Query: 300 IDYDF 304
             ++F
Sbjct: 257 GYFNF 261


>gi|163793122|ref|ZP_02187098.1| Exonuclease III [alpha proteobacterium BAL199]
 gi|159181768|gb|EDP66280.1| Exonuclease III [alpha proteobacterium BAL199]
          Length = 259

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 86/302 (28%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N                   +    +  + K    D+V LQE+ +   V   
Sbjct: 1   MKIASWNVN----------------SVKARLDNVLDWLKTASPDVVLLQEIKT---VDDG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +         +  +A+  K      Q        D  +R    
Sbjct: 42  FPRLE-------IEALGYQCAIHGQKSYNGVAILSKVGLADVQPRLFGDDNDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V   G ++ V  I+L +   + S +  Y  +        + LK   T+   +  
Sbjct: 92  --LEATV---GGEVRVATIYLPNGNPVTSEKYPYKLA------WMKRLKARATELLRAEG 140

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
             V+ GD+N        +D        +   +                 +  D   +   
Sbjct: 141 AVVLGGDYNVIPTDDDVHDPAAWAGDALCRPETRAAFREILWLGYTDAFRALDQTVHKYT 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L            D       + SDH P+  
Sbjct: 201 FWDYQGGAWQRDEGVRIDHLLLSPQAADRLTASGI-------DTAPRAKPKASDHTPVWC 253

Query: 301 DY 302
           + 
Sbjct: 254 EI 255


>gi|226309896|ref|YP_002769790.1| exodeoxyribonuclease [Brevibacillus brevis NBRC 100599]
 gi|226092844|dbj|BAH41286.1| exodeoxyribonuclease [Brevibacillus brevis NBRC 100599]
          Length = 253

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 79/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y K  +ADI  LQE        ++
Sbjct: 1   MKLISWNVNGLRACVNKGFY---------------EYFKEANADIFCLQETKLQEGQIEM 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S       +               +   +    +       R
Sbjct: 46  EIGEAYHQYWNYAEKKGYSGTAVFTKM---------------EPLSVRYGLEEDHEPEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     S  +               L        +   
Sbjct: 91  -----VITLEFQDFYLVTVYTPNAKRDLSRLDYRLEWEDRFRNYLLQL--------DGKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                         +   ++     +  +      + +A 
Sbjct: 138 PVVVCGDLNVAHQEIDLKNAKSNRGNSGFTPEEREKMTSLLAAGFVDTYRYFYPDQTDAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  +     L++                    SDHCP+ 
Sbjct: 198 TWWSFMPKVRERNIGWRIDYFLASERLAPALLRAGI-----------DSQVMGSDHCPVV 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|29348219|ref|NP_811722.1| hypothetical protein BT_2810 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340122|gb|AAO77916.1| Metallophosphoesterase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 611

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 83/304 (27%), Gaps = 63/304 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L +   L+         +RL+++NI   +  +GV            D+  +    
Sbjct: 4   MKKIFLLISAILLIVPVQAQHTLRLMTYNIKNATGMDGVC-----------DFQRIANVI 52

Query: 62  KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   D+V +QE+    + +    V  +                     +     I +  
Sbjct: 53  NNASPDVVAVQEVDSVTNRSNQKYVLGEIAERTQMYACFAPAID----YDGGKYGIGLLS 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   V  Q+  L G      R   R  +    E           HL              
Sbjct: 109 KKAPVHLQTIALPG------REEARALILAEFE----DYIYCCTHLSLTEED-------- 150

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                  +  + LK +    K+   P  +AGD N +                 +    F 
Sbjct: 151 -----RMKSLEILKTFAASYKK---PLFLAGDMNAEPESDFIK----------ELQKEFR 192

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              + R +       K  IDY    +   K     S   +              SDH PI
Sbjct: 193 ILSNPRQHTFPAPAPKETIDYVAAFKQNDKGFAVVSSEVVNEPV---------ASDHRPI 243

Query: 299 SIDY 302
            ++ 
Sbjct: 244 VVEL 247


>gi|255535312|ref|YP_003095683.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10]
 gi|255341508|gb|ACU07621.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10]
          Length = 301

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 70/305 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +++ ++N+N ++                    +L ++      DI  LQE+ +     
Sbjct: 44  EPMKIATYNVNGING----------------RLPVLLRWLNEKQPDIACLQELKAPQD-- 85

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +AV  K          L G +   S   
Sbjct: 86  --------KFPEAAIAEAGYEAVWVGQKSWNGVAVLSKIGTPTVSRTSLPGDE---SDEA 134

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R      +E+    + +  ++L +       +  Y        Q    L         S
Sbjct: 135 SRY-----LEVKIADLIIACLYLPNGNPAPGPKFDYK------MQWFSRLDAHAEMLITS 183

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GDFN                           +  +                  
Sbjct: 184 GKKVLLIGDFNVMPTEKDVYKPEKYINDALFHPDVQAAFHNLTEQGWTDAIRYLYPDETI 243

Query: 247 ANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +        + ID+F++       L +          D      ++ SDH P+
Sbjct: 244 YTFWDYFRNAYQRNAGMRIDHFLLSAEVLPQLKKAGV-------DTDVRGWEKSSDHGPV 296

Query: 299 SIDYD 303
            I+ +
Sbjct: 297 WIELE 301


>gi|62289818|ref|YP_221611.1| exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941]
 gi|82699743|ref|YP_414317.1| AP endonuclease [Brucella melitensis biovar Abortus 2308]
 gi|254689123|ref|ZP_05152377.1| AP endonuclease [Brucella abortus bv. 6 str. 870]
 gi|254697256|ref|ZP_05159084.1| AP endonuclease [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730155|ref|ZP_05188733.1| AP endonuclease [Brucella abortus bv. 4 str. 292]
 gi|256257372|ref|ZP_05462908.1| AP endonuclease [Brucella abortus bv. 9 str. C68]
 gi|260754622|ref|ZP_05866970.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870]
 gi|260757845|ref|ZP_05870193.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292]
 gi|260761668|ref|ZP_05874011.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883649|ref|ZP_05895263.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68]
 gi|62195950|gb|AAX74250.1| Xth-1, exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941]
 gi|82615844|emb|CAJ10848.1| AP endonuclease, family 1:Exodeoxyribonuclease III
           xth:Endonuclease/exonuclease/phosphatase family
           [Brucella melitensis biovar Abortus 2308]
 gi|260668163|gb|EEX55103.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292]
 gi|260672100|gb|EEX58921.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674730|gb|EEX61551.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870]
 gi|260873177|gb|EEX80246.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68]
          Length = 260

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 87/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L+ + +    DIV LQE+ S +     
Sbjct: 1   MKIATWNIN----------------SVKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------QFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLPGDDSDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V+ ++L +   +D+ +  Y  S        Q L++W  ++     
Sbjct: 92  --IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEE 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249
           P V+AGD+N      +           +             N       +          
Sbjct: 144 PLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A    I  +  + +          ++ SDH P+++
Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256

Query: 301 DY 302
             
Sbjct: 257 TL 258


>gi|291223046|ref|XP_002731525.1| PREDICTED: angel-like [Saccoglossus kowalevskii]
          Length = 349

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 91/299 (30%), Gaps = 20/299 (6%)

Query: 19  SVAQKVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                +R++ WN+   +      + +    +S+   T  +  L +     D DI+ L+E+
Sbjct: 48  PQGPSIRIMQWNVLADALCQSRDDFIRSPPDSLLWQTRKFRSLEEILT-YDPDIICLEEV 106

Query: 75  GSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLG 132
             Y+     +     +   +  +          +N     A+  ++    ++    P L 
Sbjct: 107 DHYHDFYNPMLQSIGYQGTFKPKPDSPCVYCLDHNGPDGCALFYKQDKFDMIDGITPNLT 166

Query: 133 AKD--SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             D    SR  N+ A+   +    K         KS     +     +    L   Q + 
Sbjct: 167 IPDVTKGSRTTNQVAIIYTLRCRKKSF-----EGKSLVVGVTHLKAKNGWQELRHAQGKI 221

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L + + ++     P V  GDFN + +    ++     ++   +     +  ++       
Sbjct: 222 LLEHLNKQ-SRGRPIVFCGDFNAESSEPVYSEFQNSNLNLKSTYQLLSENGNTEPEYTTW 280

Query: 251 LRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      IDY    ++                 D+        SDH  +  D  F
Sbjct: 281 KIRPSGEAKHTIDYIWHSEDQLTIDALLPIPTDSQLGDERAPSYITSSDHFSLVFDLRF 339


>gi|182420508|ref|ZP_02643101.2| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens NCTC 8239]
 gi|182380424|gb|EDT77903.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens NCTC 8239]
          Length = 262

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 94/291 (32%), Gaps = 45/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+    + +  + W       +     + +  K+   DI+  QE   +      
Sbjct: 4   LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137
              + +         +   +  +  D   AI   K    VL+         P +     F
Sbjct: 57  DLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109

Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           + +  R   +L +  +I+G KI + + HL         E        ++ ++ +      
Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRN 253
              +    P++I GDFN  +     N    +  +     + +   K              
Sbjct: 159 KNYEIYKTPYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY 218

Query: 254 KIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               IDY +  +          +     N DD K  G   SDH P+  + +
Sbjct: 219 DGRIIDYILYSKE---------YEIKSLNIDDRKINGGYPSDHYPVICELE 260


>gi|254506149|ref|ZP_05118293.1| exodeoxyribonuclease III [Vibrio parahaemolyticus 16]
 gi|219550967|gb|EED27948.1| exodeoxyribonuclease III [Vibrio parahaemolyticus 16]
          Length = 268

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 82/309 (26%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPLEDVEAMGYKVYFHGQKAHYGVAMLCKKEPISIQK----GFPTDNDEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  L + NG+K+ VL+       F       +        Q  + L  ++     +  
Sbjct: 91  MIMVTLEDDNGEKVTVLN-----GYFPQGDNIGHETKFPYKRQFYKDLMTYLNDHHNNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++      + +T+     +  F +   
Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEERQWLQTLLDWGFVDTFRQIHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +                I  + D      ++ S
Sbjct: 206 DVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAAKC-------IEADIDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|332533572|ref|ZP_08409434.1| exodeoxyribonuclease III [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036974|gb|EGI73433.1| exodeoxyribonuclease III [Pseudoalteromonas haloplanktis ANT/505]
          Length = 268

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 78/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        + + +         H  +A+  K          L G       +  R
Sbjct: 42  -------FPLEDVQKMGYHVYFHGQKAHYGVAMLCKKEPKSV----LKGFATDTEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                + + NG+ + V++       F       +        Q  + L   +      + 
Sbjct: 91  MISVTVEQDNGRDLTVMN-----GYFPQGDNINHETKFPYKRQFYKDLMTHLETNHTPVQ 145

Query: 204 PFVIAGDFNRKINYLGN---------------------NDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N     L                         ++  T+        F ++  
Sbjct: 146 DVIVMGDINISPTDLDIGIGEVNAKRWLKTGKCSFQPVEREWLATLLNWGFKDTFREQNP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +         I           D      ++ S
Sbjct: 206 ETDDQYSWFDYRSKGFVDNRGLRIDVVLATNELAARCIDTGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|326202355|ref|ZP_08192224.1| exodeoxyribonuclease III [Clostridium papyrosolvens DSM 2782]
 gi|325987473|gb|EGD48300.1| exodeoxyribonuclease III [Clostridium papyrosolvens DSM 2782]
          Length = 253

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 80/302 (26%), Gaps = 78/302 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +LVSWN+N L    G   W                + K +DADI  +QE           
Sbjct: 3   KLVSWNVNGLRSCIGKGFW---------------DFFKEVDADIFCVQETKLQEG-QLEL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++           +    ++  A+  K   V       +   D+  R     
Sbjct: 47  EIEGYEHYWN----------YAVKKGYSGTAIFTKIKPVSSSCGIGIEEHDNEGR----- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +  ++ ++++++  +                   +  + L+           P
Sbjct: 92  ----VITLEFEEFFLVNVYTPNSKRELERLEYRMKWEDDFREYLKQLEQ--------TKP 139

Query: 205 FVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +I GD N     +                   + +  +  +  +  F      +  A  
Sbjct: 140 VIICGDMNVAHQEIDLKNPRSNKRSAGFTMEEREKFSQLLEHGFVDTFRMLYPDKTGAYT 199

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDYF +       +                      SDHCP+ +
Sbjct: 200 WWSYMFKSREKNAGWRIDYFCVSGALKDRIEAAEI-----------YSDTMGSDHCPVGL 248

Query: 301 DY 302
             
Sbjct: 249 TI 250


>gi|114047018|ref|YP_737568.1| exonuclease III [Shewanella sp. MR-7]
 gi|113888460|gb|ABI42511.1| Exodeoxyribonuclease III [Shewanella sp. MR-7]
          Length = 270

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 84/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 S    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIVSFNINGL----------------RSRLHQLQALIDSHQPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  Q       +D    A  R
Sbjct: 42  -------FPLAEVEAMGYHVHYHGGKAHYGVAMLSKAAPIKVQKGFATDEED----AQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + VL+       F       +        +  Q L   +     +  
Sbjct: 91  MIIGTFAQANGRPLTVLN-----GYFPQGESIDHPTKYPAKRKFYQDLMAHLHANHSNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSFQPEEREWLKTLQDWGLVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +   +    LI+        + D       + S
Sbjct: 206 DRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAARLIES-------DVDYDLRGIDKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|329736070|gb|EGG72343.1| sphingomyelin phosphodiesterase [Staphylococcus epidermidis VCU045]
          Length = 327

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 94/300 (31%), Gaps = 31/300 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +++ + N+  L      +++ N  +   +D      Y +  + D+V L E+    A
Sbjct: 33  SKDSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQ--NQDVVILNELFDKKA 86

Query: 80  VAKVFPKNTWCIFYSTE-------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             ++  +      Y T           N S         +          ++QQ   +  
Sbjct: 87  SNRLLTRLHSQYPYQTPIVGKGTEGWQNTSGTYRKIKKVSGDVGIVSKWPIVQQEQHIYK 146

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                  AGN+    + +  NGK   ++  HL++    +           +   Q   +K
Sbjct: 147 KGCGADMAGNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCFKGKDKDIRQSQMNEIK 202

Query: 193 DWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            +I  +      P  I GD N  I            ++ +              ++N   
Sbjct: 203 QFIKDKNIPKNEPVYIGGDLNV-IKDSDEYQQMANNLNVSLPTQFDGNAYSWDTSSNSIA 261

Query: 252 RN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
           +          +DY ++D++  +     + +  + + +       +       SDH P+S
Sbjct: 262 KYNYPKLEPQHLDYILLDRDHAQPSSWHNDTHRVKSPEWSVKSWGKTYKYNDYSDHYPLS 321


>gi|254464825|ref|ZP_05078236.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I]
 gi|206685733|gb|EDZ46215.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I]
          Length = 268

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 85/306 (27%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  +      D+V LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------IKARAQALPDWLDEAQPDVVVLQEIKS---VDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +           ++           +A+  K      +        D  +R    
Sbjct: 42  FPREIF-------EERGYNVETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +E  V    + I +  ++L +   ++             +      + LK        
Sbjct: 92  --IEATVT-GKQAIRICGLYLPNGNPVELEADGSPVAGGKYAYKLAWMERLKARAEALLA 148

Query: 201 SLVPFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCN 246
             +P ++AGD+N                D  ++                   + +     
Sbjct: 149 DEMPALMAGDYNIIPQAEDAKRPEAWAEDALFRPQSRAAFQRIVNLGFTEAFRARHQGPG 208

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+ ++   A   L+           D      ++ SDH P
Sbjct: 209 HYSFWDYQAGAWNRNDGIRIDHILLTPQAADLLLDCQI-------DKDVRGREKPSDHVP 261

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 262 VWVELD 267


>gi|115525646|ref|YP_782557.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53]
 gi|115519593|gb|ABJ07577.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53]
          Length = 256

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 74/302 (24%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                     L  + K+   D V LQE+ +       
Sbjct: 1   MKIATFNINNINN----------------RLPSLLAWLKSAKPDAVCLQELKTEQ----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +S           +A+  K   V+     L G           
Sbjct: 40  -----HKFPEKALRDAGYSAVWVGQKSWNGVAILSKKNPVVVIRTRLPGDPTDSEARYVE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV          + +  ++  +       +     +        + L        +S  
Sbjct: 95  GAV--------GGVVIACLYAPNGNPQPGPKFDRKLA------WMKRLHKHAGSLLKSGA 140

Query: 204 PFVIAGDFNRKINYLGNN-------DDFWKTIDPNDS-------LIRFPKEKDSRCNANK 249
           P VIAGDFN     L          D   +    N              +          
Sbjct: 141 PVVIAGDFNVAPTELDIYPTKSWNKDALIQPESRNAYAKLVGQGWTDAIRSLHPEQRIYS 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +D+ ++  +    L++          D         SDH P+ I
Sbjct: 201 FWTYWRNRFERDDGLRLDHLLLSPDVAPRLVKAGV-------DRAVRARDGASDHAPVWI 253

Query: 301 DY 302
             
Sbjct: 254 VL 255


>gi|110805445|ref|YP_688965.1| exonuclease III [Shigella flexneri 5 str. 8401]
 gi|110614993|gb|ABF03660.1| exonuclease III [Shigella flexneri 5 str. 8401]
          Length = 268

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNMFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGVVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|306820340|ref|ZP_07453979.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551669|gb|EFM39621.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 251

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 82/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N L                        +  KN DAD   LQE+         
Sbjct: 1   MKFVSWNVNGLRAAREKGFD---------------EIFKNFDADFFCLQEIKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++           +    ++  A+  +   +        G          R
Sbjct: 45  MDMDGYYSYWN----------YAKRKGYSGTAIFTRIEPIDV----FYGLGKEEHDDEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   + +V  ++  +        +          +  + L        ++  
Sbjct: 91  L-----ITLEYPEFYVSTVYTPNSKQELLRLDYRQEWEDEFREFFKNL--------DAKK 137

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD N                   +     + +  +        F      + N  
Sbjct: 138 PVIICGDMNVAHKEIDLKNPKTNRKNPGFTDEEREKFTLLLDAGFTDTFRYFYPDKENEY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++     + L   S  + ++            SDHCP+S
Sbjct: 198 SWWSYRFNARKNNTGWRIDYFLVSDRLQEKLTAASIHQDVF-----------GSDHCPVS 246

Query: 300 IDYD 303
           ++  
Sbjct: 247 VELS 250


>gi|291294670|ref|YP_003506068.1| Endonuclease/exonuclease/phosphatase [Meiothermus ruber DSM 1279]
 gi|290469629|gb|ADD27048.1| Endonuclease/exonuclease/phosphatase [Meiothermus ruber DSM 1279]
          Length = 641

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/345 (11%), Positives = 89/345 (25%), Gaps = 61/345 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWK------------------NSVKRTTSDYTL 56
               +V   +R+V +N+                               ++       +  
Sbjct: 291 ATPPAVGGTLRVVGFNLLNFFNTFDGLPDTVDNCTYGLGGAPADCRGADTPAEFDRQWPK 350

Query: 57  LRQYAKNLDADIVFLQEMGSY-----NAVAKVFP------KNTWCIFYSTERLINHSKRD 105
                  ++ D++ L E+ +      +A+A +              F   +         
Sbjct: 351 TVAAILAMNPDVLGLNELENDGYGPDSAIAFLVNKLNEATAPGTYAFIDADAATGQVNAL 410

Query: 106 SNNDIHTAIAVRKKNVRVLQQSY-----PLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
             + I   +  +   V  + Q+        +   DS  R     A       NG    V 
Sbjct: 411 GTDAIKVGLIYKPARVTPVGQTAVLNTPAFVNGGDSAPRNRASLAQAFRQNDNGAIFIVN 470

Query: 161 DIHLKSFCFLDSLENT---YSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKI 215
             HLKS      L +         ++ ++  Q L  W+       +    ++ GD+N   
Sbjct: 471 VNHLKSKGSPCDLPDQGDGQGNCNAVRTRAVQQLVAWLATHPTGIADPDILLIGDYNSYA 530

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                      T+     +            +         +DY +   +    +   + 
Sbjct: 531 QEDPI-----ATLKKAGFINLLEARLGPDAYSYVFDGQWGYLDYALASASLNAQVSGVAE 585

Query: 276 SEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303
             I  +E ++                      R SDH P+ +  +
Sbjct: 586 YHINADEPNVLDYNTNFKTPNLQVLLYAPDQYRTSDHDPVVVGLN 630


>gi|157374807|ref|YP_001473407.1| exonuclease III [Shewanella sediminis HAW-EB3]
 gi|157317181|gb|ABV36279.1| exodeoxyribonuclease III [Shewanella sediminis HAW-EB3]
          Length = 268

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 89/309 (28%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN                   +    L+    +   D++ LQE  +++ V   
Sbjct: 1   MKIVSFNING----------------IRARLHQLQALIDSHQPDVIGLQETKAHDDV--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   V  Q     G       A  R
Sbjct: 42  -------FPVADVEAMGYKVHYHGGKAHYGVAMLSKLEPVKVQK----GFPTDDDEAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + +L+       F      ++        +  + L  ++ +      
Sbjct: 91  MIMGTFTQENGRPLTILN-----GYFPQGDNISHETKYPAKRKFYKDLMVYLNEHHTPDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 DIAIIGDINISPVDLDIGIGAPNAKRWLKTGKCSFQPEEREWLKTLMDWGLVDTFRELHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            R         +           ID  +  ++  + L++        + D      ++ S
Sbjct: 206 ERSERYSWFDYRSKGFVDNRGLRIDVVLATKSLAERLVES-------DVDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|170743018|ref|YP_001771673.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46]
 gi|168197292|gb|ACA19239.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46]
          Length = 269

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 79/306 (25%), Gaps = 66/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                       L+R++      D++ LQE    N    +
Sbjct: 3   LTVSTWNIN----------------SVRLRIDLVRRFLDEARPDVLCLQETKCPNDRFPL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +                +    +  +A+  +   + Q+        D+      R
Sbjct: 47  KELQGF---------GYPHVVFAGQKGYNGVAILSRLPLLSQEVMSFCDRPDA------R 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +L    G+   ++          D  +   +   +        L+ W    K    
Sbjct: 92  HISAVLGPEAGEAAGIVLHDFYVPAGGDVPDAALNDKFAHKLAFMDELRAW--GGKRPTG 149

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
           P ++ GD N     + + ++      +                   +      +      
Sbjct: 150 PAILVGDLNVAPLEHDVWSHRQLLDVVSHTPVETERLETLRGEAGWVDTMRHLRPEPEKI 209

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  +    +   +               +R SDH P
Sbjct: 210 YTWWSYRSPDWAAADKGRRLDHIWVTADLAGSVKAVTV-------ARHARAWERPSDHVP 262

Query: 298 ISIDYD 303
           ++++ D
Sbjct: 263 VTVELD 268


>gi|89901754|ref|YP_524225.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118]
 gi|89346491|gb|ABD70694.1| Exodeoxyribonuclease III [Rhodoferax ferrireducens T118]
          Length = 274

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 83/304 (27%), Gaps = 74/304 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++  +WN+N+L+                     +  + +    D++ LQE+   +    
Sbjct: 15  TMKFATWNVNSLT----------------VRLPQVLDWLQANPVDVLALQELKLTDD--- 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                         R   +         +  +A+  +   +      + G  D  +R+  
Sbjct: 56  -------KFPVDAFRQAGYHAECFGQKTYNGVALLSREPALNVVRN-VPGFADDMARS-- 105

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +      + V+  +  +     S +  Y  +        + L+DW+  +  + 
Sbjct: 106 -------ISAEVNGVRVIGAYFPNGQEPGSDKFEYKMA------WLKGLRDWVRGELLTH 152

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
              V+ GD+N   +     D                  + +     L    +       +
Sbjct: 153 PRLVLMGDYNITFDDADVWDPVGLKDTIHCTEEERYHLRALIALG-LHDSFRLFAQPEKS 211

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++       +            D    + +R SDH P+
Sbjct: 212 YSWWDYRDFAFRRNHGLRIDHILVSDALKPLVTACVI-------DKAPRKNERPSDHAPV 264

Query: 299 SIDY 302
            +  
Sbjct: 265 VVTL 268


>gi|152982063|ref|YP_001354787.1| endonuclease/exonuclease/phosphatase family protein
           [Janthinobacterium sp. Marseille]
 gi|151282140|gb|ABR90550.1| endonuclease/exonuclease/phosphatase family protein
           [Janthinobacterium sp. Marseille]
          Length = 264

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 87/299 (29%), Gaps = 58/299 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+ ++NI+             S   +      L+Q   ++ +D++FLQE+   + +  
Sbjct: 2   QLRITTYNIH----------KGVSSFGSRPRIHALKQAINSMKSDVLFLQEVQGRHDLHA 51

Query: 83  VFPKNTW------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +     W                 +      +  H   A+      +  +         S
Sbjct: 52  LKHATDWPELSQQDFLAGDSHECAYGMNAVYDHGHHGNALLSCYPILSSR-----NQNIS 106

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             +  +R  +  +V     ++    IHL  F                  +Q + L + +T
Sbjct: 107 DHKYESRGILHCVVRAPEAEVHCFVIHLGLFAGS-------------RKRQTEALIEAVT 153

Query: 197 QKKESLVPFVIAGDFNRKINYLGN--------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              +   P +IAGDFN   N L +        ++ + + +          +         
Sbjct: 154 SSAQKDEPLIIAGDFNDWSNDLSDELRARLGVHEVYDENLVKRGFGTYIRQLAGRGPKIQ 213

Query: 249 KNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                        +D   +          ES   +            +LSDH P+    
Sbjct: 214 PARTFPAAMPFLRLDRIYVRG-----FKVESAEVLHGAI------WAKLSDHAPLVATL 261


>gi|313202112|ref|YP_004040770.1| endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688]
 gi|312441428|gb|ADQ85534.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688]
          Length = 250

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 84/287 (29%), Gaps = 48/287 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ ++NI+         L  +            R+  +NL AD+VFLQE+   +    
Sbjct: 4   TLRVATFNIHKGLTSFNARLALHDQ----------REMIRNLQADVVFLQEVQDEHHGNG 53

Query: 83  V------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +          T  +  +      + K       H   AV  +   +   ++ +      
Sbjct: 54  LRFKHWPAAGQTHFLAEACGPNYAYGKNAVYPGGHHGNAVLSRFPILQSTTHDISA---- 109

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   + I G    +  I +                     +Q   L+D+I 
Sbjct: 110 -HEIEQRGLLHCEIAIEGWPQTLHCICVHLGLL-----------ARWRFKQFGALRDYIH 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P VIAGDFN      G+     + +D  +    F         +  ++     
Sbjct: 158 AVIPEDAPLVIAGDFNDWRLSAGH-----QVMDGLNMREVFEHAHGKPARSFPSMFPLFR 212

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D   +            F+    +           SDH  +S   +
Sbjct: 213 LDRIYVRG----------FNIHSAHVHGGPRTALT-SDHAALSAVLE 248


>gi|209695422|ref|YP_002263351.1| exonuclease III [Aliivibrio salmonicida LFI1238]
 gi|208009374|emb|CAQ79647.1| exodeoxyribonuclease III [Aliivibrio salmonicida LFI1238]
          Length = 268

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 80/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+      + D++ LQE+  +N +   
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHNPDVIGLQEIKVHNDM--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++        H  +A+  K   +  Q       ++       R
Sbjct: 42  -------FPVEAVEAMGYNVYFHGQKAHYGVAMLCKKEPISVQYGFDTDTEEHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      +G K+ V++       F       +        Q  + L   +     +  
Sbjct: 91  MIMTTHERDDGSKVTVMN-----GYFPQGDSIKHETKFPYKRQFYKDLMIHLNTHHTNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                        ++     ++ + +        F     
Sbjct: 146 ELIIMGDINISPIDADIGIGEPNAKRWLRTGKCSFQPEEREWLQALKDWGFEDTFRNLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +   +      +          D      ++ S
Sbjct: 206 EVTDQFSWFDYRSKGFVDNRGLRIDVVMATPSLAGKCTEAGI-------DYELRAIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|119469281|ref|ZP_01612220.1| exonuclease III [Alteromonadales bacterium TW-7]
 gi|119447145|gb|EAW28414.1| exonuclease III [Alteromonadales bacterium TW-7]
          Length = 268

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 78/310 (25%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+       + 
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEI---KVHDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +         + + +         H  +A+  K          L G       +  R
Sbjct: 42  FPLD-------DVQKMGYHVYFHGQKAHYGVAMLCKKEPKSV----LKGFATDTEESQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                + + NG+ I V++       F       +        Q  + L   +        
Sbjct: 91  MISVTIEQDNGRDITVMN-----GYFPQGDNINHETKFPYKRQFYKDLMTHLDTNLTPDQ 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                                +  T+        F +   
Sbjct: 146 DVVVMGDINISPTDLDIGIGEVNAKRWLKTGKCSFQPEERQWLSTLLDWGFKDTFRELYP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q+  +  I           D       + S
Sbjct: 206 DVNDQYSWFDYRSKGFLDNRGLRIDVVLATQSLAERCIDSGI-------DYELRAIDKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 259 DHAPIWSTFT 268


>gi|212692517|ref|ZP_03300645.1| hypothetical protein BACDOR_02013 [Bacteroides dorei DSM 17855]
 gi|212664928|gb|EEB25500.1| hypothetical protein BACDOR_02013 [Bacteroides dorei DSM 17855]
          Length = 276

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 81/309 (26%), Gaps = 71/309 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +  L   L   +A     +RL+++NI   +  + V            D+  +    
Sbjct: 30  MKKTLPLLFILLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 78

Query: 62  KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            ++  ++V LQE+ S          + ++  +     +++             +     I
Sbjct: 79  NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 130

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  K + V  ++  L G      R   R  +    +                   +   
Sbjct: 131 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 177

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                           L+           PF +AGD N +                    
Sbjct: 178 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 214

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             F    D   +          IDY    +   K     S   +              SD
Sbjct: 215 QDFQILSDVNQHTFPAPSPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 265

Query: 295 HCPISIDYD 303
           H P+ I  +
Sbjct: 266 HRPLVIVLE 274


>gi|134296326|ref|YP_001120061.1| exodeoxyribonuclease III [Burkholderia vietnamiensis G4]
 gi|134139483|gb|ABO55226.1| Exodeoxyribonuclease III [Burkholderia vietnamiensis G4]
          Length = 271

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 80/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +     AD++ LQE          
Sbjct: 14  MKIATWNVNSLN----------------VRKQHVLDWLAQSGADVLCLQE---------- 47

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +    +    +  +A+  ++   + +S  +             
Sbjct: 48  LKLPDEKYPRADLEAVGYRSWFTGQKTYNGVAILVRDTLAVDESDVVRNIPGFDDPQQRV 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV +        + ++  +  +    DS +  Y        Q    L  W+  + +   
Sbjct: 108 VAVTVE------GVRIVSAYFPNGQAPDSDKFLYK------MQWLDALHAWLGAELQRYP 155

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 156 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDAFRRFEQPEKTFT 215

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D +    ++ SDH P+  
Sbjct: 216 WWDYRMFAFRRNAGLRIDHILLSPALAATCTSCEV-------DRVPRTWEQPSDHTPVVA 268


>gi|118592059|ref|ZP_01549453.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614]
 gi|118435355|gb|EAV42002.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614]
          Length = 269

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 82/309 (26%), Gaps = 70/309 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             +++LV+WNIN                       ++ Q    +  D++ LQE    +A 
Sbjct: 2   TDRIKLVTWNIN----------------SVRLRMPIVEQLIDEVAPDVICLQETKCPDA- 44

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                        +  R   +          +  +A   +      +        DS   
Sbjct: 45  ---------NFPENAFRKAGYEHMAIHGQKGYHGVATLSRLPLSNIEKRDFCQVGDSRH- 94

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                 V + V  NG  I + + ++ +    D  + T +P           +  W+  ++
Sbjct: 95  ------VAVDVPFNGSSIRLHNFYVPAG--GDEPDRTINPKFGHKLDFMNEMLGWLKGEE 146

Query: 200 ESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +  P ++ GD N                   +     + F +  +    L    +    
Sbjct: 147 TAK-PAILVGDLNVAPYEHDVWSHKKLLKVVSHTPVETELFEQVREAGGWLDAMRQFTPL 205

Query: 244 RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                     +            +D+  + Q                         ++ S
Sbjct: 206 DEKLYTWWSYRAKDWSAADKGRRLDHVWVSQPLAP-------HVKGTTVLRDARGWEKPS 258

Query: 294 DHCPISIDY 302
           DH P+  ++
Sbjct: 259 DHAPVIAEF 267


>gi|260772508|ref|ZP_05881424.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14]
 gi|260611647|gb|EEX36850.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14]
          Length = 270

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 83/309 (26%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L+        DI+ LQE+  ++     
Sbjct: 1   MKIVSFNINGL----------------RARLHQLQALIDKHQPDIIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPVQAVEAMGYHVYFHGQKAHYGVALLCKKAPLEVQK----GFPTDNDDHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++ NG K+ VL+       F       +        Q  Q L +++T       
Sbjct: 91  MIIGTFLDENGDKVTVLN-----GYFPQGDNIHHETKFPYKRQFYQDLMNYLTDYHTPDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++      + + +        F K   
Sbjct: 146 AIIVMGDINISPIDLDIGIGEVNRQRWLKTGKCSFQPEERQWLQRLLDWGLEDTFRKLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           S  +       +           ID  +   +     ++        + D      ++ S
Sbjct: 206 SVEDKFSWFDYRSRGFDDNRGLRIDTILATPSLAIDCVES-------DIDYPLRAIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWAVF 267


>gi|89055306|ref|YP_510757.1| exodeoxyribonuclease III [Jannaschia sp. CCS1]
 gi|88864855|gb|ABD55732.1| Exodeoxyribonuclease III [Jannaschia sp. CCS1]
          Length = 261

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 80/303 (26%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN                   +    L  +      D+  LQE+ S +     
Sbjct: 2   MRIATFNING----------------VKARIGALGDWLDEAKPDVALLQEIKSVDE---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++           +A+  K               D  +R    
Sbjct: 42  ------NFPREMLEDRGYTVETHGQKGFNGVAILSKLPLEDVSRGLPGDDTDEQARW--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V  + + + V  ++L +       +  Y  +        + +         S +
Sbjct: 93  --IEATVMGDTQAVRVCGLYLPNGNPTPGPKYDYKLA------WMERMHRHAQGLLASEM 144

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                       +   ++ +        F     +     
Sbjct: 145 PVVMAGDYNIIPQDADAARPEVWQDDALARSESRAAFRRLLALGFTEAFRARNQAP-GMY 203

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L +    + +   D       + SDH P+ 
Sbjct: 204 SFWDYQAGAWNKNDGIRIDHHLLSPEAADLLQECWIEKDVRGRD-------KPSDHVPVW 256

Query: 300 IDY 302
           ID 
Sbjct: 257 IDL 259


>gi|313125896|ref|YP_004036166.1| metal-dependent hydrolase [Halogeometricum borinquense DSM 11551]
 gi|312292261|gb|ADQ66721.1| metal-dependent hydrolase [Halogeometricum borinquense DSM 11551]
          Length = 283

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 73/294 (24%), Gaps = 48/294 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            VR++S+N+   ++ +G   W +             +  +    D+V LQE   +   A 
Sbjct: 19  PVRVLSFNVRYDTDDDGPDAWPHRRDDA-------VRLVRYHRPDVVCLQEPLKHQLDAF 71

Query: 83  VFPKNTWCIFYSTERLIN--------------HSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
               + +          N               +          +    + +        
Sbjct: 72  RDGLDEYEWVAVPRTGGNAADATDSKETDDAASTGESVPVGYDASRFSLEDSETFWLSET 131

Query: 129 PLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           P       +     R      ++  +G+   V  +HL      +           L   +
Sbjct: 132 PEEPGSVGWDATLPRILTRATLQGESGETFHVASVHL-----DNDGVKARLEGAKLARDR 186

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L            P ++AGD N   +            D            +   + 
Sbjct: 187 LAQL----------DGPVILAGDCNATPDSDPYEAVTEAFADARHVAKHGHHGPEKTMHH 236

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                    IDY  + +              L      ++R    SDH P+  D
Sbjct: 237 F-TGDPTERIDYVFVRE----------CDVRLSATLADRTREGYPSDHFPVVAD 279


>gi|290242949|ref|YP_003494619.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
 gi|288945454|gb|ADC73152.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
          Length = 361

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 103/305 (33%), Gaps = 29/305 (9%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           ++R+   A++  ++  +A++A  +RL SWNI  L    G             DY  + + 
Sbjct: 4   LLRRGAFAILLIVLLPSAALAD-LRLASWNIQHLGWNVG------------KDYPAVARI 50

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           A     D + +QE+ +   + ++              L + +   +      A   R+  
Sbjct: 51  AAQF--DFLAIQEVMNAEGIYRLRDTLEDATGAEWSVLYSDALGRNTYREKYAFLWREAA 108

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V  +  +   +   D F+    R     +    G     L   +                
Sbjct: 109 VEYVGGALTYIDEADRFA----REPFSAVFRSRGTDQHFLAATVHITYGD--RVADRVEE 162

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--NNDDFWKTIDPNDSLIRFP 238
              L +   WL D + +        ++ GDFN   ++ G  +     + +    +     
Sbjct: 163 IEALRRYWDWLADVMPEYAGER---ILFGDFNLPPHHDGWASMRAVAEPLVTEGATTLST 219

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            ++     AN      +P D+ +   +A         SE+     D +    R+SDH P+
Sbjct: 220 HDRR---YANLYDNLWVPKDHTLPLGDAGILPFPVVLSEVTGVYWDHEKARDRVSDHAPV 276

Query: 299 SIDYD 303
            + ++
Sbjct: 277 YVLFE 281


>gi|21111415|gb|AAM39749.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66572117|gb|AAY47527.1| nuclease [Xanthomonas campestris pv. campestris str. 8004]
          Length = 1131

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/340 (12%), Positives = 96/340 (28%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 516 PAPRPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 575

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120
              E+ + + +  +  +       + ++   +     + +    I     V+        
Sbjct: 576 GTVEVENISVLQTLAARINADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADVSGGV 635

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVEL---LVEINGK--KIWVLDIHLKSFC 168
            RV   S    G   +++  G        R  + L   + + +G+   +  + +H +S  
Sbjct: 636 PRVEVVSVAQEGKATTWTEPGGAVSLLNDRPPLVLSTRVHQADGRVLPLTTIVVHQRSLN 695

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
             ++ +   +   +    QA +L   +   Q+ +     ++ GDFN      G  D    
Sbjct: 696 GAETDDAAGTRIRAKRQAQASYLARLLQARQQLDPAERVLVMGDFNAFEFNDGYVDAMGT 755

Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + +    +
Sbjct: 756 VTGKPAADAQTVVSGDGIDLVDPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANDALMR 815

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 816 ASNIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 855


>gi|77747746|ref|NP_635825.2| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|77761085|ref|YP_241547.2| nuclease [Xanthomonas campestris pv. campestris str. 8004]
          Length = 1193

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/340 (12%), Positives = 96/340 (28%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 578 PAPRPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120
              E+ + + +  +  +       + ++   +     + +    I     V+        
Sbjct: 638 GTVEVENISVLQTLAARINADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADVSGGV 697

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVEL---LVEINGK--KIWVLDIHLKSFC 168
            RV   S    G   +++  G        R  + L   + + +G+   +  + +H +S  
Sbjct: 698 PRVEVVSVAQEGKATTWTEPGGAVSLLNDRPPLVLSTRVHQADGRVLPLTTIVVHQRSLN 757

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
             ++ +   +   +    QA +L   +   Q+ +     ++ GDFN      G  D    
Sbjct: 758 GAETDDAAGTRIRAKRQAQASYLARLLQARQQLDPAERVLVMGDFNAFEFNDGYVDAMGT 817

Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + +    +
Sbjct: 818 VTGKPAADAQTVVSGDGIDLVDPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANDALMR 877

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 878 ASNIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917


>gi|85375417|ref|YP_459479.1| hypothetical protein ELI_12950 [Erythrobacter litoralis HTCC2594]
 gi|84788500|gb|ABC64682.1| hypothetical protein ELI_12950 [Erythrobacter litoralis HTCC2594]
          Length = 262

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 84/302 (27%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN                   +    L ++ +     +  LQE+ S       
Sbjct: 1   MRIATFNING----------------IKARLPRLIEWLEETRPTVACLQEIKSQ---DDG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP + +         I +            +A+    V+  +    L             
Sbjct: 42  FPADEF-------EKIGYHAIWHGQKSFNGVAILADGVKPEETQRGLGVDGPKEGEGEQA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +E  V      + +  ++L +       +  Y  +        + L+  + +  +S  
Sbjct: 95  RYLEAHVN----GVRIACLYLPNGNPHPGPKFDYKLA------WMEKLRARMRELWQSEQ 144

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GDFN   +                   + D + + +    +              
Sbjct: 145 PTIVTGDFNVIPHDDDVWSPKAMQDDALMQPESRDAYQRQLADGWTDAVRTLNPRGGVWT 204

Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + +           ID+ ++       L            D      ++ SDH P+ +
Sbjct: 205 FWDYQRGAWQRDHGFRIDHCLLSPELADRLTAVGV-------DKDYRGREKASDHTPVWV 257

Query: 301 DY 302
           + 
Sbjct: 258 EL 259


>gi|49082844|gb|AAT50822.1| PA2545 [synthetic construct]
          Length = 271

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 78/312 (25%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE          
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIERHQPDVIGLQE---TKVADDQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +    + +         H  +A+  +   +          ++S      R
Sbjct: 42  FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHRGFPSDGEES-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     +  G  I V++       F       +        +    L+  +    +  
Sbjct: 90  RFIWGTFSDAQGNPITVMN-----GYFPQGENREHPTKFPAKQRFYADLQSLLENSFKPE 144

Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
              V+ GD N                          L    ++  T+     +  F    
Sbjct: 145 QALVVMGDINISPGDCDIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALN 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +  +                  D      +
Sbjct: 205 PEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVLQPRFKDAGI-------DYDLRGME 257

Query: 291 RLSDHCPISIDY 302
           + SDH PI ++ 
Sbjct: 258 KPSDHAPIWLEL 269


>gi|30062986|ref|NP_837157.1| exonuclease III [Shigella flexneri 2a str. 2457T]
 gi|30041235|gb|AAP16964.1| exonuclease III [Shigella flexneri 2a str. 2457T]
 gi|281600889|gb|ADA73873.1| Exonuclease III [Shigella flexneri 2002017]
 gi|313649224|gb|EFS13658.1| exodeoxyribonuclease III [Shigella flexneri 2a str. 2457T]
 gi|332758722|gb|EGJ89041.1| exodeoxyribonuclease III [Shigella flexneri 2747-71]
 gi|332759186|gb|EGJ89495.1| exodeoxyribonuclease III [Shigella flexneri K-671]
 gi|332762505|gb|EGJ92770.1| exodeoxyribonuclease III [Shigella flexneri 4343-70]
 gi|332767178|gb|EGJ97373.1| exodeoxyribonuclease III [Shigella flexneri 2930-71]
 gi|333004385|gb|EGK23916.1| exodeoxyribonuclease III [Shigella flexneri K-218]
 gi|333006836|gb|EGK26333.1| exodeoxyribonuclease III [Shigella flexneri K-272]
 gi|333018389|gb|EGK37688.1| exodeoxyribonuclease III [Shigella flexneri K-304]
 gi|333018754|gb|EGK38047.1| exodeoxyribonuclease III [Shigella flexneri K-227]
          Length = 268

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGVVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|170717538|ref|YP_001784627.1| exonuclease III [Haemophilus somnus 2336]
 gi|168825667|gb|ACA31038.1| exodeoxyribonuclease III [Haemophilus somnus 2336]
          Length = 267

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 89/311 (28%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L +  +    D++ LQE  +   +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLDRIVEKYQPDVIGLQEIKVSDEDFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     + I++                 H  +A+  K    + +       +++  R  
Sbjct: 45  NLVEHLGYHIYHH------------GQKGHYGVALLLKQEPKVIRRGFSTDDENAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E +   + V++       F       +        +    L+ ++ Q+ + 
Sbjct: 91  ---IIMADLETDFGLLTVIN-----GYFPQGENRQHETKFPAKEKFYADLQHYVEQEHDR 142

Query: 202 LVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N     L                         ++   +     +  F  +
Sbjct: 143 NNPILIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWINRLYNYGLIDTFRHK 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ +++Q   +  +                  ++
Sbjct: 203 NPTINDQFSWFDYRSKGFDDNRGLRIDHILVNQLLLERCVDAGI-------AFDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|299067973|emb|CBJ39187.1| putative metal dependent endonuclease/phosphatase [Ralstonia
           solanacearum CMR15]
          Length = 248

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 95/286 (33%), Gaps = 49/286 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80
           +R+ ++NI+             +          +RQ    +DADIVFLQE+   N     
Sbjct: 4   LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53

Query: 81  AKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           A++F  +      +         + +    +  H   A+  +   +L ++  +     S 
Sbjct: 54  AELFDPHYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAILSRYPILLSENLDI-----SD 108

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  +  + ++   ++ +L  H   F                  +QA+ L + +  
Sbjct: 109 HRFEQRGLLHAVADLGFGEVHLLCAHFGLF-------------ARSRRRQAEALIERVCS 155

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
              +  P V+AGDFN   N L       +++   +   +    +        +    + +
Sbjct: 156 VVPTDAPLVVAGDFNDWNNRLD--RVICQSLGVTEVADKAVSAR--PLRTFPSHLPWLRL 211

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +            F     +    +   +R SDH P+  +  
Sbjct: 212 DRIYVRG----------FEIDRAHALTGRDWAQR-SDHVPLLAELS 246


>gi|149369522|ref|ZP_01889374.1| hypothetical protein SCB49_06842 [unidentified eubacterium SCB49]
 gi|149356949|gb|EDM45504.1| hypothetical protein SCB49_06842 [unidentified eubacterium SCB49]
          Length = 311

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/316 (9%), Positives = 82/316 (25%), Gaps = 50/316 (15%)

Query: 25  RLVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--------- 68
            +  +N+  L +        +     + + +          Q    +   I         
Sbjct: 5   TIAFYNLENLFDTVNDPKKMDETFTPRGAARWNEQKLEAKVQMLGAVIPTIGQADNPFAP 64

Query: 69  --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQ 125
             + + E+ +   + ++           +    +         I TA+  R      +  
Sbjct: 65  VLIGVAEVENATVLKQLVKVEPLKDLGYSFVHFDSPDE---RGIDTALLYRSSFFKVIES 121

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           ++  +L   +       R  + ++ E+ G+++ VL  H  S    +            ++
Sbjct: 122 KAVHVLIETEKGHPDLTRDILHVVGELEGQRVHVLVNHWPSKRAGEKETAYKR---MEVA 178

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            Q + +   I + +      +I GDFN        +            L+    +     
Sbjct: 179 NQNRAVITEIKKTEP-DARIIIMGDFNDDPQSDSISQLVGTDFYNPMELLLTRDD----- 232

Query: 246 NANKNLRNKIPIDYFVMDQNA-------------------YKFLIQESFSEILYNEDDIK 286
            +          D  ++  N                       +    +    +      
Sbjct: 233 GSTNYRGKWNLFDQILVSNNFMKPYDNPFTFEKAAIFNSDAVVIQDGDYKGNPFRTYAGP 292

Query: 287 SRGKRLSDHCPISIDY 302
                +SDH P+   +
Sbjct: 293 KYLGGVSDHFPVYAVF 308


>gi|84499578|ref|ZP_00997866.1| extracellular nuclease [Oceanicola batsensis HTCC2597]
 gi|84392722|gb|EAQ04933.1| extracellular nuclease [Oceanicola batsensis HTCC2597]
          Length = 1215

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 93/358 (25%), Gaps = 75/358 (20%)

Query: 16   CTASVAQKVRLVSWNINTLS-----------EQEGVSLWKNSVKRT-------TSDYTLL 57
                V    R+ S N+  L              + +    ++  R              +
Sbjct: 712  TPEEVDGNFRVASMNVLNLFSTLDTNPGSNNGPDVIGPDGDTEPRGANSEAEFQRQLDKI 771

Query: 58   RQYAKNLDADIVFLQEMGSY------------------NAVAKVFPKNTWCIFYSTERLI 99
                  +DA+I  L E+ +                     +  +       +       +
Sbjct: 772  VNAIVAMDANIFGLVEIENDFLGAGGVSPEEGATSLGDPTIQVLVDAVNAALGDEVFGWV 831

Query: 100  NHSKRDSNND-IHTAIAVRKKNV-------RVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
            +  +     D I  A+  R   V        + +             R  NR A+    E
Sbjct: 832  DPGQEFVGGDAISNALIYRTDRVALVGEMAILEEFEGRSFYDPLGAGRPLNRPAIAQTFE 891

Query: 152  I--NGKKIWVLDIHLKSFCF------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
               +G+ + V   HLKS          D+  +    + +     A+ L DW+        
Sbjct: 892  DLNSGETLTVSVNHLKSKGSLSGLEADDAQGDGQGNNNATREAAAEMLSDWLATDPTGQG 951

Query: 203  -VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
                +I GD N                   D  +      +    +         +DY +
Sbjct: 952  AENVLILGDLNSYAREDPIKAL------QADGYVDLGHAANPDAYSYVFDGQVGTLDYAL 1005

Query: 262  MDQNAYKFLIQESFSEILYNEDDIKSRGK---------------RLSDHCPISIDYDF 304
             +   ++     +   I  +E D                     R SDH P+ + +DF
Sbjct: 1006 ANGALFEDFAGATEWNINSDEADALDYNLDFGKDPSLYTGDTATRYSDHDPVIVGFDF 1063


>gi|255008849|ref|ZP_05280975.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides fragilis 3_1_12]
 gi|313146594|ref|ZP_07808787.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135361|gb|EFR52721.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 361

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 86/304 (28%), Gaps = 68/304 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +++ ++N+++   ++                  + +Y +    DIV LQE  +    
Sbjct: 100 GRTLKIATYNVDSFGNEQSGYSC-----------KEIAKYMEEHQVDIVCLQEFAANRYF 148

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                +NT+  +                     IA+  K      +      +++     
Sbjct: 149 TADSIRNTFANWQYVIIPQAPDSISILQ-----IALFSKYPVKDSKLITYPDSRNCS--- 200

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179
                +   ++++G+ + V + HL++     +                            
Sbjct: 201 -----MWCDLDVDGQTVRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVARQLLEGL 255

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +    + QA+ L+  I     +  P ++ GDFN   +    +      +        F
Sbjct: 256 NENFRKRAAQAKTLEQLIRT---TPYPILVCGDFNSLPSSYTYSTVKGDNLQDG-----F 307

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                      +  +  + IDY    +                  D         SDH P
Sbjct: 308 QTCGHGYMYTFRYFKRLLRIDYIFHSKEFK-------------GVDYYSPDLDLCSDHNP 354

Query: 298 ISID 301
           + ++
Sbjct: 355 VVME 358


>gi|149370646|ref|ZP_01890335.1| endonuclease/exonuclease/phosphatase family protein [unidentified
           eubacterium SCB49]
 gi|149356197|gb|EDM44754.1| endonuclease/exonuclease/phosphatase family protein [unidentified
           eubacterium SCB49]
          Length = 350

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 98/327 (29%), Gaps = 64/327 (19%)

Query: 1   MIRKYVLALVFFLVPCTASVA---------------QKVRLVSWNINTLSEQEGVSLWKN 45
           M +K++L+ V  ++      +                 ++++S+N++  +         +
Sbjct: 64  MRKKFMLSAVIIVLAFLQFNSFYKFSSDAISEENYKHTLKVLSYNVHLFNSYHFKDFDAS 123

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
                        +  K    DI+ LQE    +    V     +  F +        +  
Sbjct: 124 EK--------KFNEIVKAYQPDILSLQEYSDADDPKIVGYPYKYVHFKT-----KAVRNG 170

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
            N   +   A+  K   + + ++    A ++         + + +  +   + V ++HLK
Sbjct: 171 VNLKYYLGHAIYSKYPIINKGAFDFENAINNT--------LFVDIVKDKDTVRVYNLHLK 222

Query: 166 SFCFLDSLENTYS--------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
           SF    S+                     QA  +   +  K +S  P +I GDFN     
Sbjct: 223 SFGISPSISKLQEGDKKKLLGRMSQSFKDQAIQVSAILDHKNKSNYPSIITGDFNNTAFS 282

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
              N+         D    + ++                ID+ +               E
Sbjct: 283 YVYNELT------EDMNDAYIEQGSGLGTTYSFDGFPFRIDFILA--------------E 322

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
             ++     +  +  SDH PI     +
Sbjct: 323 KYFDILSFTTIKETFSDHHPILSTLGW 349


>gi|149198151|ref|ZP_01875198.1| hypothetical protein LNTAR_15857 [Lentisphaera araneosa HTCC2155]
 gi|149138753|gb|EDM27159.1| hypothetical protein LNTAR_15857 [Lentisphaera araneosa HTCC2155]
          Length = 336

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 96/313 (30%), Gaps = 28/313 (8%)

Query: 1   MIR---KYVLALVFFLVPCTASV----AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           M R   K++  L         +      + V ++++N+   +  E     K+SV R    
Sbjct: 1   MKRGSAKFIFLLATVFPIVVQAQIKLKPESVSILAYNLYNYNPSESSYQLKSSVSR---- 56

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
                     +DADIV L E+G  +++ ++         + T           ++     
Sbjct: 57  -QATANVIAQIDADIVLLSELGHGDSLDELLKDLAERQVHYTF---KSIVEGPDSLRRLC 112

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           I  +   V+V  ++      K          A  +    N  K+  +  HLKS       
Sbjct: 113 ILAKFPPVKVDHRTRVKFKLKSEEVFVSRGFAYCIFEWQNSYKLHFIGAHLKSKIPTPLG 172

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +       +    Q  +L D I +K+      ++AGD N   +     +  ++       
Sbjct: 173 QTDMRRYEAR---QLHYLVDEILKKEPEAN-IIVAGDMNDTFDSSPIKEIQYRRYKAEKR 228

Query: 234 LIRFPKEKDSR---CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           L        S     +          IDYF         +  ++                
Sbjct: 229 LYDLRPYDKSHASWTHYYDKSDEYSRIDYFFSSYAMLSEINYDTLVI------PHSPHWF 282

Query: 291 RLSDHCPISIDYD 303
             SDH P+ + + 
Sbjct: 283 IASDHRPMLLSFT 295


>gi|84497619|ref|ZP_00996441.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Janibacter
           sp. HTCC2649]
 gi|84382507|gb|EAP98389.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Janibacter
           sp. HTCC2649]
          Length = 262

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 76/303 (25%), Gaps = 66/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+ +WN+N                   S    +  + +  D D++ +QE          
Sbjct: 2   VRIATWNVN----------------SIRSRIDRVEAWLERTDVDVLAIQETKCREE---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++           +A+  +            G  D        
Sbjct: 42  ------QFPFDRFEALGYAVAHHGLSQWNGVAIASRVGLDDVSR----GFPDVPHWGEPA 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    +      I +  +++ +   L+     Y  +        + L+           
Sbjct: 92  VAEARAIGATCNGIRLWSLYVPNGRALEDPHMHYKLA------WLEQLRVQTAAWAAEGQ 145

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N                           ++ +                    
Sbjct: 146 PFALMGDWNIAPQDEDVWSMDYYLDKSHVSPPERAAFQAVLDAGVSDVVRPHTPEPGTFT 205

Query: 249 KNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +        + ID+ +      + +   +        D  + +GK  SDH P+ I
Sbjct: 206 YWDYQRLAFQKRRGMRIDFILASDPLAQRVRGAAI-------DREERKGKGASDHAPVVI 258

Query: 301 DYD 303
           + +
Sbjct: 259 EVE 261


>gi|28900670|ref|NP_800325.1| hypothetical protein VPA0815 [Vibrio parahaemolyticus RIMD 2210633]
 gi|28809050|dbj|BAC62158.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
          Length = 324

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 52/318 (16%), Positives = 103/318 (32%), Gaps = 30/318 (9%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFL 71
             T S   ++  V+ N+                 S ++        +   + L+ DI+ L
Sbjct: 5   ANTLSQPSRITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGL 64

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-- 129
           QE+ S       F    +  +++T            +    AIA R     V +  +   
Sbjct: 65  QEVFSIEETRAYFLSLGFP-YFATVDTPKIEDEYIYSRPVVAIASRFPIEDVKRVEFDSN 123

Query: 130 -LLGAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLD-------SLENTYSPS 180
            L     + +   +R+ +   +V      I +   HLKS    D       S       S
Sbjct: 124 SLTPFGVNEAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTETPEPSSRVMARWLS 183

Query: 181 CSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                 +A  L+D +  Q +   +P V+ GD N+ I+    N+   +T   + + ++   
Sbjct: 184 TQQRGWEAAMLRDAMQAQYRAHPIPTVLMGDMNQPISKESVNNVLTETFSDSVTELQLKD 243

Query: 240 EKDSRCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----- 286
             + +           + +      +DY ++ Q             I Y   +       
Sbjct: 244 GWNLQTGSSLEVRPATHYHFSTGNVLDYILLSQEFDTHSDISVAEVIDYQVLEQHLINPS 303

Query: 287 -SRGKRLSDHCPISIDYD 303
             + K  SDH  +S+  +
Sbjct: 304 YEKDKNASDHAFVSLTVE 321


>gi|94985077|ref|YP_604441.1| endonuclease/exonuclease/phosphatase [Deinococcus geothermalis DSM
           11300]
 gi|94555358|gb|ABF45272.1| Extracellular nuclease containing Fibronectin III domain
           [Deinococcus geothermalis DSM 11300]
          Length = 1266

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 87/325 (26%), Gaps = 47/325 (14%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFL 71
           +     V  ++R+   N+       G S  + +            +      L AD++ L
Sbjct: 673 LAAPKPVGGRLRVAGANVLNYFTTFGGSTDRGANNAYEFERQQAKIVSTLLGLKADVISL 732

Query: 72  QEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            E+ +    A+  +           T   +   K  ++  I  AI  +           P
Sbjct: 733 MEIQNNGGAALENLVAALNKEAGAGTYAAVKTGKLGTD-AITVAILYKP------ASVTP 785

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSP---SCSLL 184
           +       +   +R  V      NG      V+  H KS     +  +T           
Sbjct: 786 VGSFLTDTAAINDRPPVAQTFRENGTGEVFSVIANHFKSKGSCPASGDTDQGQGCWNQKR 845

Query: 185 SQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             QAQ L +++   Q        ++ GD N   +         +T+          +   
Sbjct: 846 VAQAQELLNFVQTVQTAAGDPDVLLLGDLNAYGDEDPI-----RTLVGGGFESLNRRIPA 900

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------- 289
               + +       +D+ +        +   +   +  +E                    
Sbjct: 901 EDRYSYQFGGQFGYLDHALASAALSGQVTGITEWHVNSDEPTFLDYNVEYKNNPNCTSSS 960

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +  +
Sbjct: 961 CTTPDLYQPDAFRSSDHDPVLVGLN 985


>gi|323705197|ref|ZP_08116773.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535623|gb|EGB25398.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 231

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 89/284 (31%), Gaps = 58/284 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++NI+   + EG                 +    + +  DIV LQE+  +   +  
Sbjct: 3   IKVMTYNIHGGKDIEGNLTLYG-----------ISNLIREIGVDIVGLQEVDVFLKRSYF 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +                          +  +   V ++++ +        +   R
Sbjct: 52  LNEIKYLAKRLKMHYAFGPNLRIGFGSF-GNGILSRYPIVKKKNHHIYS------KGERR 104

Query: 144 RAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +  L+++N  KKIW L  HL               +      Q+Q +   ++  +   
Sbjct: 105 GVLTALIQLNENKKIWFLTTHLGL-------------NRKERLVQSQEILKIVSNLE--- 148

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P ++ GDFN             + +            ++S  +   +    + IDY + 
Sbjct: 149 YPVIMTGDFNETPGE-EAYSTIIRVLKD------AVNTQNSAFHTYVDGCENVRIDYIMH 201

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY--DF 304
            +                  + IK+    LSDH P+      DF
Sbjct: 202 SKGMR--------------VESIKAIDSTLSDHLPVVASLRCDF 231


>gi|255264183|ref|ZP_05343525.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62]
 gi|255106518|gb|EET49192.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62]
          Length = 341

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/340 (12%), Positives = 90/340 (26%), Gaps = 60/340 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTT--------SDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ ++N+   S          +  R +             + Q  + LDAD V + E  
Sbjct: 1   MRIATYNVEWFSNLFDGVGEMLADDRWSGRRDVTRSQQLAAVGQVFQALDADAVMIIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             +A             +   R         N        +                +  
Sbjct: 61  DSHAKRDGLAALETFAAHFGLRASKAMTGFVNETQQEISLLYDPTQLSATHDPIGDESSK 120

Query: 136 SFSRAGNRRAVELLVEIN-----------------------GKKIWVLDIHLKSFCFLDS 172
           + S    R      +++N                       G+ + ++ +H KS     +
Sbjct: 121 AGSGDAPRFDSVFRIDLNVDRAPDQVRFSKPPLEVELKSKSGRVVRLIGVHAKSKAPHGA 180

Query: 173 LENTY--SPSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK- 226
                    S +   +Q      ++  + Q  +     ++ GDFN           F + 
Sbjct: 181 KNAAKVMQISIANRRKQLAQCIWIRQRVDQHLDRKDSVIVLGDFNDGPGLDSYEKLFGRS 240

Query: 227 -------------TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY- 267
                          DP+  +    +   +  ++              +DY ++  +   
Sbjct: 241 GVEIVLGEDDPVQLFDPHAKMALTQRIGAAPTSSRFFLRHENRYLSALLDYIMVSPDLAE 300

Query: 268 ---KFLIQESFSEILYNEDDIKSRG-KRLSDHCPISIDYD 303
               + I   F +     D          SDH P+++D +
Sbjct: 301 LAPSWHIWHPFEDPACWGDVELRDALLTASDHFPVTLDIE 340


>gi|186684269|ref|YP_001867465.1| endonuclease I [Nostoc punctiforme PCC 73102]
 gi|186466721|gb|ACC82522.1| Endonuclease I [Nostoc punctiforme PCC 73102]
          Length = 603

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 92/314 (29%), Gaps = 47/314 (14%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK------NLDADIVFLQE 73
               + + ++N+  L  ++        + +   +   +    +      +++ D+V   E
Sbjct: 49  SQDVLTVATFNVENLDPKDRRFDDIAKIIQNNLNAPDIISLVEVQDNNGSINDDVVNANE 108

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------- 123
                  A     +    F       +    +   +I   +  R   V +          
Sbjct: 109 TYQKLIAALENIGSPAYDFVDIAPSDDRDGGEPGGNIRVGLLFRPSRVTLAKLPKKGGSL 168

Query: 124 ------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
                            P      + +   +R+ +      N +K++++  H  S     
Sbjct: 169 DAVAITQGANDLDLSLNPGRIDPTNSAFEESRKPLAAEFIFNDQKLFIIANHFVSKLGG- 227

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                 SPS     +QA+ + +++ Q    +     ++ GD N   + L       KT+ 
Sbjct: 228 ------SPSDVQRVKQAEIVNEFVGQILEVDPQAKVIVLGDLNDLPDSLP-----LKTLK 276

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            N           S     K   N   ID+ ++ +N  +    +     +          
Sbjct: 277 GNILENLTDSLPASDRFTFKFKGNPQLIDHLLVSENLSRVAQPKIDIVHVNVGFSRP--- 333

Query: 290 KRLSDHCPISIDYD 303
             +SDH P+   + 
Sbjct: 334 --VSDHDPVIAAFT 345


>gi|39996639|ref|NP_952590.1| exonuclease III [Geobacter sulfurreducens PCA]
 gi|39983520|gb|AAR34913.1| exodeoxyribonuclease III [Geobacter sulfurreducens PCA]
 gi|298505653|gb|ADI84376.1| exodeoxyribonuclease III [Geobacter sulfurreducens KN400]
          Length = 271

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 79/312 (25%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVS+N+N L                 S    L +  +    DI+ LQE    +A    
Sbjct: 1   MKLVSFNVNGL----------------RSRLHQLEELVRTHRPDIIGLQETKVQDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + + +         H  +A+         +    LG       A  R
Sbjct: 41  ------DFPLAAVQALGYHVIYHGQKTHHGVALLSLQPPRDVR----LGLPGDGDEAQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                     G  + V++       F       +        +    +  ++    +   
Sbjct: 91  FIGATFDLPAGPPLRVIN-----GYFPQGESRDHPVKFPAKERFYADVLAYLKSSCDPDA 145

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
           P  + GDFN                                ++  +        + +   
Sbjct: 146 PLAVMGDFNIAPVDPDIGIGADNAKRWLRTGKTSFLPEERAWFAALRDWGLHDSYRELYP 205

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID+ ++ +   +              D      ++
Sbjct: 206 DIDDRFSWFDYRSRGFESEPKRGLRIDHILLTRPLQQACRAAGI-------DYDIRAMEK 258

Query: 292 LSDHCPISIDYD 303
            SDHCP+ ++ D
Sbjct: 259 PSDHCPVWVEVD 270


>gi|319427438|gb|ADV55512.1| conserved hypothetical protein [Shewanella putrefaciens 200]
          Length = 876

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 101/378 (26%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66
             + +    +R+ S+N+          +      N    T        T +      ++A
Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRTKIVSAITAMNA 514

Query: 67  DIVFLQEMGSY-----NAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +      +A+  +           N +      +      K   ++ I   
Sbjct: 515 DIVGLMEIANNGFGEKSALKNLVDALNEKQTADNAYSFIELADADKYDGKYFGSDAITVG 574

Query: 114 IAVRKKNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                    ++       +  + A  R ++    +I+ +
Sbjct: 575 MLYRAGKVTLEGAARVIETPEQHATAGSVTRTKADKTETNPGNDAYQRHSLAQTFKIHNE 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +      +     A+ L + +   K     
Sbjct: 635 PLTVVVNHLKSKGSGCLEDWVNFEESVDPADLQGKCNAFRVSAAKVLGEALKDVKGDLLV 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTI-------------DPNDSLIRFPK 239
                      P  +  DF+   +        W T+                  +    +
Sbjct: 695 IGDMNAYGMEDPIRVLTDFDASKSERDIVTASWTTLGGKVYERQGSKIDKGYGLINLNTQ 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
                  +         +D+ + + +  K L+      I   E ++   GK+        
Sbjct: 755 AHGVATYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLFEYGKKYSGNLAKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ I   +
Sbjct: 815 ENAFSASDHDPVIIALSY 832


>gi|167570556|ref|ZP_02363430.1| exodeoxyribonuclease III [Burkholderia oklahomensis C6786]
          Length = 258

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 81/302 (26%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L+                     +  +    D D++ LQE          
Sbjct: 1   MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +       S P        +  G  
Sbjct: 35  LKVPDEKFPRADLEAAGYRSWFTGQKTYNGVAILAR------ASLPFGETNVVRNIPGFE 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A + L+      + ++  +  +    DS +  Y        Q    L+ W+  + +   
Sbjct: 89  DAQQRLIAATIDGVRIVSAYFPNGQAPDSDKFVYK------MQWLDALQAWLKDEMQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  D       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLLALGFVDAFRRFDQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++           +        D +    ++ SDH P+  
Sbjct: 203 WWDYRMLAFRRNAGLRIDHILLSPALADTCTSCTV-------DRVPRTWEQPSDHTPVVA 255

Query: 301 DY 302
             
Sbjct: 256 QI 257


>gi|163749176|ref|ZP_02156426.1| hypothetical protein KT99_20084 [Shewanella benthica KT99]
 gi|161331246|gb|EDQ02135.1| hypothetical protein KT99_20084 [Shewanella benthica KT99]
          Length = 365

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/362 (10%), Positives = 93/362 (25%), Gaps = 73/362 (20%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIV 69
           ++  ++    ++++ S+N+             +   + ++       + +Y      D++
Sbjct: 1   MLSTSSDSHYQLKIASFNLFNFIAPPDACYEFDNIYTQEQWQKKLNWIAKYLNEHQPDVI 60

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQ 126
             QE+ S + +  +        ++S             +    A+A R      V V   
Sbjct: 61  AFQEVFSPDELETLTKACGLD-YFSVLDSPQVMDDFIYSKPVVALASRYPIKEAVSVSVD 119

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIW---VLDIHLKSFCFLDSLENTYSPSCSL 183
                          +R+ +   V++    +    V+    K   F        S + S 
Sbjct: 120 KEWAAQMGLVSEFEFSRKPLRATVDLPKLGLCDCYVVHFKSKRTLFDAQDIKANSATSSF 179

Query: 184 LSQ------------QAQWLKDW-----------------ITQKKESLVPFVIAGDFNRK 214
                            + L  W                 + ++ ++  P ++ GDFN  
Sbjct: 180 RKSSAGAELNTGQLLAIEALGRWGSSVQRGSEAALLRYAMVERRSQTQNPMILMGDFNDI 239

Query: 215 INYL--------------------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           ++                             +   F++  D  D           +    
Sbjct: 240 LSDGVLAALTSVDTRIKPQADMSQGAMGDIAHQLGFYRLQDSYDLYQASQYSLSEQARPA 299

Query: 249 KNLRN--KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSDHCPISI 300
            +        +DY ++                 Y   D            + +DH P+ I
Sbjct: 300 THYYFAQGSVLDYILLSSEFDAKNDLSLAEVGRYETYDRHLINPSFEHDSQSTDHAPVMI 359

Query: 301 DY 302
             
Sbjct: 360 TI 361


>gi|153837336|ref|ZP_01990003.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ3810]
 gi|260903451|ref|ZP_05911846.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ4037]
 gi|149749367|gb|EDM60140.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ3810]
 gi|308110362|gb|EFO47902.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ4037]
          Length = 268

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 81/309 (26%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q     G          R
Sbjct: 42  -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKQEPIRVQK----GFPTDNEEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      NG+K+ VL+       F      ++        Q  + L  ++     +  
Sbjct: 91  MIMATFENENGEKVTVLN-----GYFPQGDNISHETKFPYKRQFYKDLMTYLNDHHSNDE 145

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               ++ +T+        F K   
Sbjct: 146 QLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSFQPEEREWLQTLLNWGFEDTFRKLYP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +   +  +  I+          D      ++ S
Sbjct: 206 EVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQKCIESGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|305665675|ref|YP_003861962.1| hypothetical protein FB2170_05240 [Maribacter sp. HTCC2170]
 gi|88710433|gb|EAR02665.1| hypothetical protein FB2170_05240 [Maribacter sp. HTCC2170]
          Length = 324

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 85/319 (26%), Gaps = 51/319 (15%)

Query: 25  RLVSWNINTLSEQEGVS-----------LWKNSVKRTTSDYTLLRQYAKNLD-------A 66
            +  +N+  L +                  K + KR       L +    +         
Sbjct: 16  TIAFYNLENLFDTIDDPETMDDDFTPEGFKKWTPKRYKKKVYKLAKTISEIGLESANRPP 75

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-Q 125
            +V + E+ +   V  +                +         I T +   +    VL  
Sbjct: 76  ALVGIAEVENEMVVQDLINAEPLRKTAYDYVHYDSPDE---RGIDTGLLYHRDYFEVLFS 132

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLL 184
           +   L+      +R   R  + +  ++NG+ + V   H  S    +         +   +
Sbjct: 133 EPITLMVYNPDGARDTTRDILYVHGKLNGEVVHVFVNHWPSRRDGEEETGYKRVEAAKTI 192

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             +   +++     +     ++I GDFN   +           ++ ++      K     
Sbjct: 193 KFKMAQIEE-----QFENPNYIIMGDFNDNPDSKSIQL----LLEDSNLYNPMEKLGSPE 243

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDDI 285
             +    R+    D  ++  N + +                        F    +     
Sbjct: 244 RGSANYRRSWSLFDQIMVSHNFFNYEKGTHSFAHANIFDDNLLTEWKGKFKGTPFRTYAG 303

Query: 286 KSRGKRLSDHCPISIDYDF 304
           +      SDH P+ I   +
Sbjct: 304 RKYIGGYSDHFPVYIQLKY 322


>gi|114564870|ref|YP_752384.1| endonuclease/exonuclease/phosphatase [Shewanella frigidimarina
           NCIMB 400]
 gi|114336163|gb|ABI73545.1| Endonuclease/exonuclease/phosphatase [Shewanella frigidimarina
           NCIMB 400]
          Length = 870

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/378 (10%), Positives = 95/378 (25%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--------LLRQYAKNLDA 66
             T +    +R+ S+N+              S     +            +      ++A
Sbjct: 454 APTVADMGDIRVASFNVLNFFNDVVGGDANPSGSNRGALIEEEMVLQRTKIVNALVAMNA 513

Query: 67  DIVFLQEMGSYNAVA-------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           D+V L E+ +                  ++     +      +      K   ++ I   
Sbjct: 514 DVVGLMEIANNGFGELSAIQNLVDALNAELTDDQAYRFVEIEDADKYEDKFIGSDAITVG 573

Query: 114 IAVRKKNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   + +                    +    +  ++       R ++     IN +
Sbjct: 574 MLYRPARITLDGAAKVIATPEQHAAEGAQTREKDGVVEQNPSYDKFQRHSLVQTFSINDE 633

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKE---- 200
           K+ ++  HLKS                   +      S     A+ L + +   +     
Sbjct: 634 KLTIVVNHLKSKGSGCIEDWADFNENGEPADLQGKCNSFRVSAAKVLGESLKDVEGDVLV 693

Query: 201 --------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  D++            W T++                 +    +
Sbjct: 694 IGDLNAYGKEDPVAVLTDYDASTTDHVIRTASWTTLNGKVYEREGSVIDKGYGLINLNTQ 753

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + +++    L+      I   E ++   G +        
Sbjct: 754 AHGADTYSYSYNGELGNLDHALANESLAAKLVGIDDWHINSVESNLFEYGSKYTGELVKT 813

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ I   +
Sbjct: 814 ESPFSASDHDPVIIALSY 831


>gi|325927724|ref|ZP_08188952.1| putative extracellular nuclease [Xanthomonas perforans 91-118]
 gi|325541925|gb|EGD13439.1| putative extracellular nuclease [Xanthomonas perforans 91-118]
          Length = 1193

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/340 (10%), Positives = 90/340 (26%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 578 PAPVPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK------- 118
              E+ + + +  +  +       + ++   +     + +    I     V+        
Sbjct: 638 GTVEVENLSVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTAQIAGGV 697

Query: 119 -KNVRV----LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-----KIWVLDIHLKSFC 168
            +   +      ++          S   +R  + L   ++        +  + +H +S  
Sbjct: 698 ARVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQADGRVLPLTAIVVHQRSLN 757

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
             ++ +       +    QA++L   +   Q+       ++ GDFN      G  D    
Sbjct: 758 GAETDDAAGMRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 817

Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + +    +
Sbjct: 818 VTGKPAPDAQTVVGGDGTDLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANDALMR 877

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 878 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917


>gi|171321352|ref|ZP_02910309.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
 gi|171093370|gb|EDT38560.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
          Length = 286

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 80/307 (26%), Gaps = 50/307 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +RL+ WN+    + +GV     ++         L ++      D++ LQE+         
Sbjct: 1   MRLIDWNVQWGRDADGVVDLAGTIAAGR----RLGEF------DVLCLQEVTRGFGALPG 50

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +   ++                  +            A+  +          L   
Sbjct: 51  QPGPDQFTELAALLPGYTIVEAIGADLPALEPGAPRRQFGNAIATRLPVGRVLRQLLPWP 110

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            D+   +  R A+++ +      + ++  HL+ +            +     ++A    D
Sbjct: 111 ADAGGPSMPRVALDVELTTPSGALRIVTTHLEYYSARQ--RLAQVDALRARHREACAHAD 168

Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                + +  PF         +I GDFN                D    +  +       
Sbjct: 169 QPAPAENATGPFTATGQPRDAIICGDFNSAFGSEAYRRLLEPIADAPSFVDAWVARHPGN 228

Query: 245 CNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                             +  D+  +       + +                  R SDH 
Sbjct: 229 TPPPTAGVYDTVQWSEGPLACDFVFVTATLLPRVTRCEI-----------DGDVRASDHQ 277

Query: 297 PISIDYD 303
           P+ ++ +
Sbjct: 278 PVVLELE 284


>gi|113460979|ref|YP_719046.1| exonuclease III [Haemophilus somnus 129PT]
 gi|112823022|gb|ABI25111.1| Exodeoxyribonuclease III [Haemophilus somnus 129PT]
          Length = 267

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 89/311 (28%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L +  +    D++ LQE  +   +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLDRIVEKYQPDVIGLQEIKVSDEDFPY 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     + I++                 H  +A+  K    + +       +++  R  
Sbjct: 45  HLVEHLGYHIYHH------------GQKGHYGVALLLKQEPKVIRRGFSTDDENAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E +   + V++       F       +        +    L+ ++ Q+ + 
Sbjct: 91  ---IIMADLETDFGLLTVIN-----GYFPQGENRQHETKFPAKEKFYADLQHYVEQEHDR 142

Query: 202 LVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N     L                         ++   +     +  F  +
Sbjct: 143 NNPILIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWINRLYNYGLIDTFRHK 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID+ +++Q   +  +                  ++
Sbjct: 203 NPTINDQFSWFDYRSKGFDDNRGLRIDHILVNQLLLERCVDAGI-------AFDIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI  ++
Sbjct: 256 PSDHAPIWAEF 266


>gi|126463202|ref|YP_001044316.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104866|gb|ABN77544.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC
           17029]
          Length = 339

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 96/338 (28%), Gaps = 56/338 (16%)

Query: 21  AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72
           A+ +R+ ++N+   +    +   +        R      +    L      LDAD + + 
Sbjct: 2   ARPLRIATYNVEWFNGLFDDHGRLRTDNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E  + +               +     +H+     ++    IA+     R+     P   
Sbjct: 62  EAPNQSRRRSTVKALE-TFARTFGLRASHAVMGFPSETEQEIALLYDPSRIEAHHDPQSS 120

Query: 133 AKDSFSR----------------AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           AK                       ++  +EL +  +G  + V+ +H KS     +    
Sbjct: 121 AKAPRFDDVFRFDIDVDATPEAIRFSKPPLELALRADGHPLRVIGVHAKSKAPHGARNPA 180

Query: 177 Y--SPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------- 224
                      QQ     WL+  +          ++ GDFN           F       
Sbjct: 181 EAVRIGIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPGLDEYEKLFGRSGIEI 240

Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFL 270
                     +  +P+  +    K      +A           +  +D+ ++  +     
Sbjct: 241 VLGLEEPPELRLHEPHARMALTQKVGIQPSSARFWLAPEQQYFEALLDFIMVSADLAAKS 300

Query: 271 IQESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303
            +            +   +++      SDH P+++D D
Sbjct: 301 PRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDID 338


>gi|260779121|ref|ZP_05888013.1| exodeoxyribonuclease III [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605285|gb|EEX31580.1| exodeoxyribonuclease III [Vibrio coralliilyticus ATCC BAA-450]
          Length = 268

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 86/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAVIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q       +D       R
Sbjct: 42  -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKKEPLSVQKGFPTDNEDHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+K+ VL+       F      ++        Q  + L  ++     +  
Sbjct: 91  MIMATFEDDNGEKVTVLN-----GYFPQGDNISHETKYPYKRQFYKDLMTYLNDHHNNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ KT+     +  F +   
Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLKTLMDWGFVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  I+        + D      ++ S
Sbjct: 206 EVEDRFSWFDYRSRGFDDNRGLRIDVVLATPKLAEKCIES-------DIDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|255014323|ref|ZP_05286449.1| hypothetical protein B2_10460 [Bacteroides sp. 2_1_7]
          Length = 245

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 88/308 (28%), Gaps = 68/308 (22%)

Query: 2   IRKYVLAL--VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           +R+  + L  +   +  + +  + +R++S+NI      +G            +D   +  
Sbjct: 1   MRRLAIILVGLILCLGISQAKNKHLRVMSYNIRIGIGMDG-----------ETDLGRIAD 49

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRK 118
               +  D V LQE+ S     + F  N +        +        S +     IA   
Sbjct: 50  AINRITPDYVGLQEVDS--VCERSFWVNQYAELAKHTGMYPIFAPATSRSKGLYGIAALS 107

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +  +   L G ++            +L+ +  K   + + H              S
Sbjct: 108 KVPPLSYRVISLPGKEEP----------RVLLCLEYKDYILFNTHF-------------S 144

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIR 236
                  +  + +    T+      P +I GDFN              W+ +        
Sbjct: 145 LDKESRIESIKVINQIATEY---DKPIIITGDFNMTPGSNEFEAMKSKWQLLSD------ 195

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                          R ++ +DY                 +  +            SDH 
Sbjct: 196 ------PSIKTYPADRPRLRLDYIY------------GDMKKNFKVTKDVVVDVMSSDHL 237

Query: 297 PISIDYDF 304
           P+ ID +F
Sbjct: 238 PLYIDVEF 245


>gi|56460559|ref|YP_155840.1| exonuclease III [Idiomarina loihiensis L2TR]
 gi|56179569|gb|AAV82291.1| Exonuclease III [Idiomarina loihiensis L2TR]
          Length = 269

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 76/309 (24%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN                   +    L+        D++ LQE   ++     
Sbjct: 1   MKIISFNING----------------IRARLHQLQAVIDKHQPDVIGLQETKVHDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K         P  G       A  R
Sbjct: 41  ------QFPLKDVEAMGYHVIYHGQKGHYGVAMLSKKPL----ENPQFGFPTDDDEAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      +G  + +L+       F       +        +  Q L  ++        
Sbjct: 91  MIMGDYPLADGGHVRILN-----GYFPQGESRDHPTKFPAKEKFYQDLMSYLDNDLSPEQ 145

Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++ + +        + +   
Sbjct: 146 PVIVMGDVNISRIDLDIGIGENNAKRWLKTGKCSFLPEEREWIQRLMDWGFTDTYRQLNP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              N       +           ID  +  +   K              D      ++ S
Sbjct: 206 DVDNQFSWFDYRSRGFDDNRGLRIDLILATKALAKQCEDSGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 259 DHAPVWSTF 267


>gi|258621396|ref|ZP_05716430.1| exodeoxyribonuclease III [Vibrio mimicus VM573]
 gi|262171177|ref|ZP_06038855.1| exodeoxyribonuclease III [Vibrio mimicus MB-451]
 gi|258586784|gb|EEW11499.1| exodeoxyribonuclease III [Vibrio mimicus VM573]
 gi|261892253|gb|EEY38239.1| exodeoxyribonuclease III [Vibrio mimicus MB-451]
          Length = 268

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L+        D++ LQE  +       
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A+  K   V      + G         
Sbjct: 45  QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDSEEHQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    + +G K  +L+       F       +        Q  + L  ++ + + +
Sbjct: 89  KRMIMATFADEDGNKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
               V+ GD N                        ++     ++ +T+     +  F + 
Sbjct: 144 TERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLMDWGLVDTFRQL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +      +   +          D       +
Sbjct: 204 HPEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAETCQEAGI-------DYELRGIDK 256

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 257 PSDHAPIWATF 267


>gi|149773191|dbj|BAF64770.1| predicted extracellular nuclease [Shewanella livingstonensis]
          Length = 870

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/378 (10%), Positives = 94/378 (24%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--------LLRQYAKNLDA 66
             T +    +R+ S+N+              S     +            +      ++A
Sbjct: 454 APTVADMGDIRVASFNVLNFFNDVVGGDANPSGSNRGALIEEEMVLQRTKIVNALVAMNA 513

Query: 67  DIVFLQEMGSYNAVA-------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           D+V L E+ +                  ++     +      +      K   ++ I   
Sbjct: 514 DVVGLMEIANNGFGELSAIQNLVDALNAELTDDQAYRFVEIEDADKYEDKFIGSDAITVG 573

Query: 114 IAVRKKNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   + +                    +    +  +        R ++     IN +
Sbjct: 574 MLYRPARITLDGAAKVIATPEQHAAEGAQTRDKDGVVEQSPSYDKFQRHSLVQTFSINDE 633

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKE---- 200
           K+ ++  HLKS                   +      S     A+ L + +   +     
Sbjct: 634 KLTIVVNHLKSKGSGCIEDWAEFNENGEPADLQGKCNSFRVSAAKVLGESLKDVEGDVLV 693

Query: 201 --------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  D++            W T++                 +    +
Sbjct: 694 IGDLNAYGKEDPVAVLTDYDASTTDHVIRTASWTTLNGKVYEREGSVIDKGYGLINLNTQ 753

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + +++    L+      I   E ++   G +        
Sbjct: 754 AHGADTYSYSYNGELGNLDHALANESLAAKLVGIDDWHINSVESNLFEYGSKYTGELVKT 813

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ I   +
Sbjct: 814 ESPFSASDHDPVIIALSY 831


>gi|17545188|ref|NP_518590.1| hypothetical protein RSc0469 [Ralstonia solanacearum GMI1000]
 gi|17427479|emb|CAD13997.1| putative endonuclease/exonuclease/phosphatase protein [Ralstonia
           solanacearum GMI1000]
          Length = 248

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 93/286 (32%), Gaps = 49/286 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80
           +R+ ++NI+             +          +RQ    +DADIVFLQE+   N     
Sbjct: 4   LRVATYNIH----------KGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVA 53

Query: 81  AKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           A++F  +      +         + +    +  H   A+  +   +L ++  +     S 
Sbjct: 54  AELFDPHYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAILSRYPILLSENLDI-----SD 108

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  +  + ++   ++ +L  H   F                  +QA+ L + +  
Sbjct: 109 HRFEQRGLLHAVADLGFGEVHLLCAHFGLF-------------ARSRRRQAEALIERVCS 155

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P V+AGDFN   N L       + +   +   +    +        +    + +
Sbjct: 156 VVPIDAPLVVAGDFNDWNNRLD--RVICQALGVTEVADKAAGAR--PLRTFPSHLPWLRL 211

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +            F     +    +   +R SDH P+  +  
Sbjct: 212 DRIYVRG----------FEIDRAHALTGRDWAQR-SDHVPLLAELS 246


>gi|254693606|ref|ZP_05155434.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya]
 gi|261213872|ref|ZP_05928153.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya]
 gi|260915479|gb|EEX82340.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya]
          Length = 260

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 87/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L+ + +    DIV LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARIDNLQHWLRESSPDIVCLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------QFPRLEIEALGYHVETHGQKCFNGVALLSKKSPDEINKGLPGDDSDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V+ ++L +   +D+ +  Y  S        Q L++W  ++     
Sbjct: 92  --IEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEE 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANK 249
           P V+AGD+N      +           +             N       +          
Sbjct: 144 PLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A    I  +  + +          ++ SDH P+++
Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTV 256

Query: 301 DY 302
             
Sbjct: 257 TL 258


>gi|218463283|ref|ZP_03503374.1| exodeoxyribonuclease III protein [Rhizobium etli Kim 5]
          Length = 263

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 68/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ + NIN                   +    L Q+ K+ D DIV LQE+ +   + + 
Sbjct: 1   MKIATCNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  K            G         +R
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKTSPSEVNR----GLPGDALDEQSR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +    N + + V  I+L +   +++ +  Y  +        + L+ +  ++     
Sbjct: 91  FLEAVFTLPNTRILRVCCIYLPNGNPVETEKYPYKLA------WMERLRSFAAERLAYEE 144

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+AGD+N                   +L    + ++ ++ N  L    +         
Sbjct: 145 MLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREAFRRLE-NLGLTDAVRATTDATRLY 203

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   +   +  + +          ++ SDH P+ 
Sbjct: 204 SFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPVI 256

Query: 300 IDYDF 304
             +DF
Sbjct: 257 AYFDF 261


>gi|271502601|ref|YP_003335627.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586]
 gi|270346156|gb|ACZ78921.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586]
          Length = 287

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 92/308 (29%), Gaps = 55/308 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------G 75
           +VS+NI     ++G             D   +    +   ADI+ +QE+           
Sbjct: 3   IVSYNIQYGLGRDG-----------RYDLARIADEVR--GADIICMQEVERFWQRSGMTD 49

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINH---SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
               +A +  +  W    + +   +      R  N           +   +  +++PL  
Sbjct: 50  QPAELAALLGEYHWVYGANLDMDASTVVADGRVLNRRRQFGTLTLSRRPILSSRNFPLPK 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSCSLLSQ 186
                  +  +  +E +V+ +G  I V + HL   C       +D++   ++ +      
Sbjct: 110 FGTLTQHSIQQGVLETVVDTDGGAIRVYNTHLSHLCAETRLPQVDAMLGIFARAPEEGGA 169

Query: 187 QAQWLKDWITQKKESLVPF-----VIAGDFNRKINYLGNNDDFW-------KTIDPNDSL 234
                 D      E  +P      ++ GD N   +                + +     +
Sbjct: 170 WCGGHPDPTAGWTEGRMPVMPQEMILMGDLNCLPDSDEYRHLVGPVSPHHGRLVRHRGLM 229

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             +        + + +      ID+ ++  +    + +                  + SD
Sbjct: 230 DAWVAAGQLESSGSTHPNVGGRIDHCLLTPSLGVTVRRCWVDTEN-----------QGSD 278

Query: 295 HCPISIDY 302
           H P+ ++ 
Sbjct: 279 HHPLWVEL 286


>gi|268589456|ref|ZP_06123677.1| exodeoxyribonuclease III [Providencia rettgeri DSM 1131]
 gi|291315121|gb|EFE55574.1| exodeoxyribonuclease III [Providencia rettgeri DSM 1131]
          Length = 270

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 86/310 (27%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L    +    +++ LQE         +
Sbjct: 1   MKFISFNINGL----------------RARPHQLAAIIEKHQPEVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP       Y     + +         H  +A+  KN  +  +        D+      R
Sbjct: 42  FP-------YEEVSQLGYHVFYHGQKAHYGVALLTKNEPLAVRKGFPTDDDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   ++ +   + V++       F       +        +  Q L+++IT  + +  
Sbjct: 90  RIIMADIQTDRGPLTVVN-----GYFPQGESRDHPTKFPAKEKFYQDLQNYITSTQTAES 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N     L                         ++   +     +  +  +  
Sbjct: 145 QLLIMGDMNISPTDLDIGIGDANRKRWLKTGKCSFLPEEREWLAKLLGWGLVDTYRAKNP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  I           D      ++ S
Sbjct: 205 DISDCYSWFDYRSKGFDDNRGLRIDLLLASNKLAERCIATGI-------DYEIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH P+  ++D
Sbjct: 258 DHAPVWSEFD 267


>gi|260459779|ref|ZP_05808033.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
 gi|259034581|gb|EEW35838.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
          Length = 264

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 84/302 (27%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN                   +    L  +      DIV LQE+ + +     
Sbjct: 1   MKIVTWNING----------------VRARIGNLTHWLTESAPDIVCLQEIKTVDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + ++           +A+  K               D  +R    
Sbjct: 41  ------QFPRAEIEALGYNVETHGQKGFNGVALLSKLRFDEVTKGLPGDDADEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V  ++L +   +D                   L+ W  ++     
Sbjct: 92  --IEGVFSTDKGALRVASLYLPNGNPIDDE-----KKFPYKLSWMARLERWAEERLRLEE 144

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANK 249
             V+AGD+N      +     +     +    +   F +  +              +   
Sbjct: 145 ALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQAFRRLLNLGFTEAVRAVTDAPDTYT 204

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A       S  + +          ++ SDH P++I
Sbjct: 205 FWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIEKHV-------RAWEKPSDHVPVAI 257

Query: 301 DY 302
           D 
Sbjct: 258 DL 259


>gi|332559251|ref|ZP_08413573.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides WS8N]
 gi|332276963|gb|EGJ22278.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides WS8N]
          Length = 339

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 95/338 (28%), Gaps = 56/338 (16%)

Query: 21  AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72
           A+ +R+ ++N+   +    +   +        R      +    L      LDAD + + 
Sbjct: 2   ARPLRIATYNVEWFNGLFDDHGRLRPDNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E  + +               +     +H+     ++    IA+     R+     P   
Sbjct: 62  EAPNQSRRRSTVKALE-TFARTFGLRASHAVMGFPSETEQEIALLYDPSRIEAHHDPQSS 120

Query: 133 AKDSFSRAGNRR----------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           A+        R                  +EL +  +G  + V+ +H KS     +    
Sbjct: 121 ARAPRFDEVFRFDIDVDATPEAIRFSKPPLELALRADGHPLRVIGVHAKSKAPHGARNPA 180

Query: 177 Y--SPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------- 224
                      QQ     WL+  +          ++ GDFN           F       
Sbjct: 181 EAVRIGIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPGLDEYEKLFGRSGIEI 240

Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFL 270
                     +  +P+  +    K      +A           +  +D+ ++  +     
Sbjct: 241 VLGLEEPPELRLHEPHARMALTQKVGIQPSSARFWLAPEQQYFEALLDFIMVSADLAAKS 300

Query: 271 IQESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303
            +            +   +++      SDH P+++D D
Sbjct: 301 PRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDID 338


>gi|312172585|emb|CBX80841.1| Exonuclease III [Erwinia amylovora ATCC BAA-2158]
          Length = 301

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 88/313 (28%), Gaps = 73/313 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++ VS+NIN L                 +    L+   +    D++ LQE       
Sbjct: 31  APAMKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVH 71

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP        +    + +         H  +A+  K   V  +       +D+    
Sbjct: 72  DDMFP-------LAEVASLGYHVFYHGQKGHYGVALLCKQQPVAVRRGFASDDEDA---- 120

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             RR +   +  +   + V++       F       +        +  + L  ++ Q+++
Sbjct: 121 -QRRIIMADIMTHSGLLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLHSYLEQQQK 174

Query: 201 SLVPFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPK 239
                +I GD N                        ++L    ++   +     +  +  
Sbjct: 175 PDNQLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFLPEEREWMDKLMNWGLVDTWRA 234

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           +  +  +       +           ID  +  +      +           D      +
Sbjct: 235 QHATINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADRCVATGI-------DYDIRAME 287

Query: 291 RLSDHCPISIDYD 303
           + SDH PI  ++ 
Sbjct: 288 KPSDHAPIWAEFS 300


>gi|297583298|ref|YP_003699078.1| 5'-nucleotidase domain-containing protein [Bacillus selenitireducens
            MLS10]
 gi|297141755|gb|ADH98512.1| 5'-Nucleotidase domain protein [Bacillus selenitireducens MLS10]
          Length = 1992

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/325 (11%), Positives = 78/325 (24%), Gaps = 60/325 (18%)

Query: 22   QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             K+ + ++N+   S +               +             D++ L E+       
Sbjct: 1281 DKMSVATYNVENFSPESDAEKTARLAYSMAVELNA---------PDVITLVEVMDNYDTR 1331

Query: 82   -----------KVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
                       +V     +        +                +I      R   V + 
Sbjct: 1332 VGPDTSASESYQVLIDAIYDEVGVEYAYAEVAPEQGQDGGIPGGNIRNGHLYRVDRVELA 1391

Query: 125  QQSY------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
              S                     L    + +   +R+ V       G+ ++V+  H  S
Sbjct: 1392 DSSVGTFEDALEVQEDGSLNFGTGLIDPQNDAFRNSRKPVVSEFIFKGEPVFVIGNHWNS 1451

Query: 167  FCFLDSLENTYSPSCSLLSQQAQWLKDWI--------TQKKESLVPFVIAGDFNRKINYL 218
                 +      P+      Q   + + I            +     V+ GDFN      
Sbjct: 1452 KRGDMAPYGMEQPAEQGSRVQRMEIAEVIGDFVGDLNEAHGDDGANVVVVGDFNDYPWSP 1511

Query: 219  GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
               +      +  D      +   +             +D  ++  +    L  +S +  
Sbjct: 1512 PVTEMA----ERGDLHNAIFELPRNAQYTYNYNGYSQSLDSILVTGSLTAELEVDSMNI- 1566

Query: 279  LYNEDDIKSRGKRLSDHCPISIDYD 303
                 D      R SDH P+ + + 
Sbjct: 1567 ---NSDFMEVHGRASDHDPMMVQFS 1588


>gi|149202739|ref|ZP_01879711.1| exodeoxyribonuclease III [Roseovarius sp. TM1035]
 gi|149144021|gb|EDM32055.1| exodeoxyribonuclease III [Roseovarius sp. TM1035]
          Length = 260

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 78/305 (25%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ ++NIN                   +    L  +      D+  LQE+         
Sbjct: 1   MKIATFNING----------------IKARIDALPAWLDEASPDVALLQEIKSVDDGFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F +  + +                      +A+  K               D  +R  
Sbjct: 45  ELFEERGYNV------------ETHGQKGFNGVAILSKRPLEDVTRGLPGDDTDEQARW- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E  V  + + + +  ++L +       +  Y  +          L         S
Sbjct: 92  ----IEATVVGDHRALRLCGLYLPNGNPAPGPKYDYKLA------WMDRLHARARDLLAS 141

Query: 202 LVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++ GD+N                       +   ++ I        F  +     +
Sbjct: 142 EEPVLMGGDYNIIPQDEDAARPDAWREDALARPESRAAFRRILNLGFTEAFRAQVQGPGH 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             ID+F++   A   +            D       + SDH P+
Sbjct: 202 YTFWDYQAGAWNKNDGIRIDHFLLSPQAADLMTDCGI-------DKDIRGRDKPSDHVPL 254

Query: 299 SIDYD 303
            ++ +
Sbjct: 255 WVELN 259


>gi|56479910|ref|NP_707364.2| exonuclease III [Shigella flexneri 2a str. 301]
 gi|56383461|gb|AAN43071.2| exonuclease III [Shigella flexneri 2a str. 301]
          Length = 268

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +       +++      R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEET-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSLLGNVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGVVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|152993433|ref|YP_001359154.1| hypothetical protein SUN_1850 [Sulfurovum sp. NBC37-1]
 gi|151425294|dbj|BAF72797.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 514

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 100/336 (29%), Gaps = 73/336 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKN---------SVKRTTSDYTLLRQYAKNLDADIVFL 71
           ++  ++ S+N+  L +                  + +          +   +LDADIV L
Sbjct: 15  SKPFKVASYNVENLFDANHQGTEYEEYIPGKHNWTKRMAEIKLDHTTEVLCDLDADIVAL 74

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ + +    +  +            I H K          +A+  +      +   + 
Sbjct: 75  QEIENESVFNALQKRLKRVGCPYRYSAITHKKGAPIQ-----VALLSRFPLKKHRDLQVS 129

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +         R  +E+  E++G  + +   H KS               S     A+ L
Sbjct: 130 FSPY------VRNILEVEAEVDGYPLTIFANHWKSKS--------RKGVESKRIAYARTL 175

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN-------------NDDFWKTIDPNDS----- 233
           +  I     S   ++I GD N   +                  +   KTID N       
Sbjct: 176 EKRILSMPASKE-YIILGDLNSNYDAYLTLPKKLNDTQGKTGINHILKTIDNNKLISKSQ 234

Query: 234 ---------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEILY 280
                       + +       +++   ++  +D+ ++  + +       +  SF     
Sbjct: 235 IRKAPEGMHYSTWNELSYKERWSHRFYGHRSTLDHILLPPSMFDGKGIDYVNNSFRVFKT 294

Query: 281 N-------------EDDIKSRGKRLSDHCPISIDYD 303
           +               + K  G+  SDH P+   +D
Sbjct: 295 DRLFTSKGYINRWQIKNGKHTGRGYSDHLPVYAIFD 330


>gi|319891524|ref|YP_004148399.1| Beta-hemolysin [Staphylococcus pseudintermedius HKU10-03]
 gi|317161220|gb|ADV04763.1| Beta-hemolysin [Staphylococcus pseudintermedius HKU10-03]
          Length = 311

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 102/300 (34%), Gaps = 34/300 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++L + N+  LS      L+ N  +   +D     +Y +  D D+V   E     +  +
Sbjct: 21  ELKLATHNVYMLS----GFLYPNWGQSKRADLISKSKYIQ--DNDVVIFNEAFYPASANQ 74

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134
           +F        Y T  L   +      + H          +A+  K     +  + +    
Sbjct: 75  LFNNLKSSYPYQTAVLGRSTSGWDRTEGHYSSTTFENGGVAIVSKYPIRERIQH-IFQHG 133

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F    N+  V   +E NGK + V+  H +S    +    +     ++ ++Q + + ++
Sbjct: 134 CGFDNDSNKGFVYTKIEKNGKFVHVIGTHTQS----EDTRCSVGQDRAIRAEQMKEISNF 189

Query: 195 IT-QKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNA 247
           +  +         I GD N   N   G   D  K ++ +D                    
Sbjct: 190 VKSKNIPKDEVVYIGGDMNVNKNAGNGEFQDMLKNLNVSDVTYTGHSSTWDPQSNSIAKY 249

Query: 248 NKNLRNKIPIDYFVMDQNAYK-------FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           N        +DY  +D++  +        + ++S +  +Y    +       SDH P+  
Sbjct: 250 NYPNSAPEYLDYIFVDKDHRQPGQLINEAVAEKSPTWDVYKFPYLYVYNDY-SDHYPVKA 308


>gi|126661140|ref|ZP_01732219.1| 5'-nucleotidase [Cyanothece sp. CCY0110]
 gi|126617583|gb|EAZ88373.1| 5'-nucleotidase [Cyanothece sp. CCY0110]
          Length = 1664

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 89/348 (25%), Gaps = 70/348 (20%)

Query: 21  AQKVRLVSWNINTLS------------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
              +++ ++N+                     S   +S +        L      LDADI
Sbjct: 479 GGTLKVAAFNVLNFFTTLDDGSGLGSGPNNLDSRGADSPEEFDRQIEKLVTTLSTLDADI 538

Query: 69  VFLQEMGS----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVR 117
           + L E+ +            A+  +       +   T   ++        D I      +
Sbjct: 539 IGLTELENEFGGDQNGDGQFAIDTLVNALNDSVGAGTYAYVDPGVNYVGGDAIAVGAIYK 598

Query: 118 KKNVRVLQQSYPLLGAKDSF--------------SRAGNRRAVELLVE--INGKKIWVLD 161
              V+V   +   L   D                  A +R  + +  E    G+   +  
Sbjct: 599 TDTVQVAPNTTVELLTDDLLPSLNLNLSGEPIFEGDATSRVPLAVTFEEIATGETFTLAV 658

Query: 162 IHLKSFCF--------LDSLENTYSPSCSLLSQQA-QWLKDWITQKK--ESLVPFVIAGD 210
            H KS            +  +       +    +A Q L  W+           ++I GD
Sbjct: 659 NHFKSKGSSGLSDTSDPNFDQGDGQGFWNFRRTEASQALDAWLKSDPTGSGDSDYLITGD 718

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
            N               ++         +       +         +DY + ++     +
Sbjct: 719 LNAYAQEDPI-----TFLENQGYTDLVEQFVGDEAYSFLFDGQYGTLDYALANETLQTQV 773

Query: 271 IQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303
              +   I  +E D                     R SDH P+ +  D
Sbjct: 774 TGATEWRINADEPDALDYNLDFGRNPDLFDGSTPYRTSDHDPVIVGLD 821


>gi|148654035|ref|YP_001281128.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1]
 gi|148573119|gb|ABQ95178.1| Endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1]
          Length = 251

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 82/290 (28%), Gaps = 50/290 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + + ++NI+             S          +    K+L  DI+ LQE+   N +
Sbjct: 4   SNSITITTYNIH----------KGMSPLNRQVVTKQIGMALKDLHPDILCLQEVQGQN-L 52

Query: 81  AKVFPKNTW-------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            ++   N +                 ++ K     + H   AV  ++        P    
Sbjct: 53  KRMVKYNEYPNQSQHEWFGEYLNCAHSYGKNCEYENGHHGNAVLSRHPL-----DPKHNV 107

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             + ++   R  +   V   G    V+ +        +              +Q + + +
Sbjct: 108 NITVNKLEQRGVLHCEVLPLGWPEPVVVLCAHLNLLEND-----------RQKQYRAIAE 156

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           ++    +   P ++AGDFN             +     +    F ++             
Sbjct: 157 YVNDTIDQSRPLILAGDFNDWKKVS-----CQRLAHELNMTEAFMQKHKKLLPTYPAKLP 211

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + +D   +       L  +                  LSDH PIS +  
Sbjct: 212 VLSLDRIYVRN-----LKVKRAWVH------KGKPWSELSDHLPISAELS 250


>gi|261567|gb|AAB24455.1| CCR4 [Saccharomyces cerevisiae]
          Length = 837

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 84/327 (25%), Gaps = 42/327 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L++   + D+D++ LQE+ S 
Sbjct: 501 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQLLSYDSDLLCLQEVESK 560

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       I  ++   +++ +       
Sbjct: 561 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 620

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 621 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 680

Query: 189 QWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLI 235
             L D +    +              P +I GDFN  IN       +     I    +  
Sbjct: 681 GVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGR 740

Query: 236 RFPKEKDSRC-----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
            F    +                      N        IDY            +      
Sbjct: 741 DFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDP 800

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++       K  SDH P+   ++F
Sbjct: 801 EYESKFIGFPNDKFPSDHIPLLARFEF 827


>gi|14861058|dbj|BAB62088.1| deoxyribonuclease I precursor [Rana catesbeiana]
          Length = 353

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 85/300 (28%), Gaps = 29/300 (9%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            L+  L  C       +++  +NI   S                     L Q  +  +  
Sbjct: 4   LLLVTLAACFLHAGSALKIAGFNIERFSAT---------KVDDPVVLNRLIQILRRYE-- 52

Query: 68  IVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           ++ +QE+ + +  A+ K+  +       S   LI+     S          R+  ++  +
Sbjct: 53  LIAVQEVMNKDDTAIIKLVRELNKATGLSYNLLISDHLGRSAYREKYVYVYREDILKPTE 112

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
             +   G ++  +    R            ++    + +                 +L  
Sbjct: 113 WFHYDDGCENCGTDVFMREPFVARFSSLTTEVKDFALAVVHTSPD----YAVREVDALFD 168

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                 +  +           I GD+N   +Y+ +       +    SL     +     
Sbjct: 169 VWEDAKQRLLM------EDIFILGDYNAGCSYVKSAHWPTIRLRQEASLQWLIGDNADTT 222

Query: 246 NANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDY 302
            +        P D  V+  +     ++  S     Y E    +  +    SDH P+ ++ 
Sbjct: 223 VSTNTN---CPYDRIVVGGSRLQDSVVPGSAKAFNYQEAYGLTYEETKAASDHYPVEVEL 279


>gi|260220884|emb|CBA28896.1| hypothetical protein Csp_A09430 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 257

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WNIN+L                      +  +      D++ LQE+         
Sbjct: 1   MKLATWNINSLG----------------VRLPQVLDWLAANPVDVLALQEL---KLTDDK 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP + +           +  +      +  +A+  +           +     F    +R
Sbjct: 42  FPADAFEAI-------GYHAQWFGQKTYNGVALLSRTPASDV-----IKNIPGFDDDMSR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + V+  +  +     S +  Y        +    L+ W+  +  +  
Sbjct: 90  VITGTV-----DGVRVIGAYFPNGQEPGSDKFEYK------MEWLSALRRWVKDELATHP 138

Query: 204 PFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNAN----------K 249
             V+ GD+N   +     D             +            C++            
Sbjct: 139 NLVLMGDYNITFDEDDVWDPVNLEGTIHCTEEERYHLRALIALGLCDSYRLFPYPPKSFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++       +   +        D    + +R SDH P+ +
Sbjct: 199 WWDYRDAGFRRNRGLRIDHILVSNALKPQVTACTI-------DKTPRKNERPSDHAPVVV 251

Query: 301 DYD 303
           D  
Sbjct: 252 DIS 254


>gi|22299328|ref|NP_682575.1| exodeoxyribonuclease III [Thermosynechococcus elongatus BP-1]
 gi|22295511|dbj|BAC09337.1| exodeoxyribonuclease III [Thermosynechococcus elongatus BP-1]
          Length = 280

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 68/303 (22%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ +WN+N                   +    + Q+  +   D + LQE    +A     
Sbjct: 22  KIATWNVN----------------SIRTRLDHVCQWLDSTGVDYLCLQETKVTDA----- 60

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                           +    S    +  +A+  +      ++               +R
Sbjct: 61  -----EFPRQPFLDRGYHVYCSGQKAYNGVAILSRQPLAGVEAGFAPQLPSHSELDTQKR 115

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +      +   + ++++++ +    DS +  Y           + L  ++ Q       
Sbjct: 116 LIRAQFAPD---VILVNVYIPNGGEYDSEKYHYK------LHWLKTLYVYLEQLTTQGE- 165

Query: 205 FVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GDFN         D                    I        F +  ++  +   
Sbjct: 166 VILCGDFNIAPEDKDLFDASDRATKVGATDAERNLLAAIRDLGFHDAFRQFTEAPGH-YS 224

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+  +                    D    R  + SDH P+ +
Sbjct: 225 WWDYRSGAFRRNHGWRIDHLYVTPGVKARACNCHI-------DIAPRRLPKPSDHAPVIL 277

Query: 301 DYD 303
           + +
Sbjct: 278 EIE 280


>gi|256113921|ref|ZP_05454714.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|265995273|ref|ZP_06107830.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3
           str. Ether]
 gi|262766386|gb|EEZ12175.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3
           str. Ether]
          Length = 369

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 98/366 (26%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S ++N                +  R       +          
Sbjct: 2   FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 62  ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        S+  L   D                 R   R  + + + I G+ +
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213
            +   HLKS     + ++  + S  +   +A+ ++  I +K      +   ++I GDFN 
Sbjct: 182 SLFVAHLKSMSGAHNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +                  
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +DY +                      +       + +           + SDHCP
Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           +S+  +
Sbjct: 362 VSVTLN 367


>gi|194290013|ref|YP_002005920.1| hypothetical protein RALTA_A1916 [Cupriavidus taiwanensis LMG
           19424]
 gi|193223848|emb|CAQ69857.1| conserved hypothetical protein;
           Endonuclease/Exonuclease/phosphatase family [Cupriavidus
           taiwanensis LMG 19424]
          Length = 284

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 84/305 (27%), Gaps = 51/305 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAVAKVF 84
           L+SWNI      +G             D        + + DAD++ LQE+       +  
Sbjct: 3   LISWNIQWGRGADG-----------RVDLARQVDTLRAMADADVICLQEVTRGFTELRGE 51

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIH--------TAIAVRKKNVRVLQQSYPLLGAKDS 136
           P        +      H    S  D              V  +        + L    D 
Sbjct: 52  PGIDQVAELTALLPGYHVLFASGVDRRDRNGAHKQFGNLVATRLPVREVFRHALPWPADP 111

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              +  R A+E+ VE   +++ V+  HL+ +  L       + +      QA        
Sbjct: 112 HVASMPRVALEVTVEAGPRRLRVICTHLEYYSALQ--RAAQAEALRDWHVQACDHASRPG 169

Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           + ++   PF         ++ GDFN K + +          D                  
Sbjct: 170 RSEKWPGPFTPEPRPAEAILCGDFNSKPDDIAYRRMLEPFDDTTTPWRDAWLHAHPGLPH 229

Query: 248 NK---------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                              D+  + +N    + +   +    +           SDH PI
Sbjct: 230 APTCAIHDKEQWPEPPFACDFMFVTENLAARIRRCEVNADTAD-----------SDHQPI 278

Query: 299 SIDYD 303
            +  D
Sbjct: 279 LLSLD 283


>gi|42528087|ref|NP_973185.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           denticola ATCC 35405]
 gi|41819132|gb|AAS13104.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           denticola ATCC 35405]
          Length = 339

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 102/342 (29%), Gaps = 59/342 (17%)

Query: 4   KYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSE--QEGVSLWKNSVKRTTS 52
              +   F L  CT              ++ +VS+N  T  +  ++G    +    +T  
Sbjct: 11  SIFICFCFILCACTGCTNVFRLQNIGKDEISIVSYNAQTFFDAVEDGREFKEFKGSKTKW 70

Query: 53  DYTLLRQYAKNLD-----------------ADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95
                 +    L                   DI+ LQE+ S   +            Y  
Sbjct: 71  SKEKYAERLFRLKEAVNLSCLALGLGEKAIPDILVLQEIESRAVIDDFCKILPMNNSYKY 130

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-- 153
              I      + +      A+  K      + + +   K S      R  +E  + I   
Sbjct: 131 AVFIPPQNGGAFS-----TALLSKFPITETKVFNVYSGKRS-----LRPLIETRIRIGNS 180

Query: 154 --GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
               ++ +L++H KS       ++          ++ + LK       E   PF+I GDF
Sbjct: 181 TGDNELVLLNVHWKSKVGNSDTDSIRRQQEEQAYKRLKELKA-----SEPQTPFIICGDF 235

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--- 268
           N+ +       +F    +  ++     +E      +     +   ID+F    N      
Sbjct: 236 NQTLEEFSLLSEFDNCWN-IEAYRAAAQEGSQPAGSYFYKESWEGIDHFFYSDNLSDGKN 294

Query: 269 -------FLIQESFSEILYNEDDIKSR-GKRLSDHCPISIDY 302
                   +  +  ++     D      GK  SDH PI I  
Sbjct: 295 FDLSFFCVINLKPLTDTSGKPDKYSVYSGKGYSDHLPIGIIL 336


>gi|116668987|ref|YP_829920.1| exodeoxyribonuclease III [Arthrobacter sp. FB24]
 gi|116609096|gb|ABK01820.1| Exodeoxyribonuclease III [Arthrobacter sp. FB24]
          Length = 294

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 76/302 (25%), Gaps = 55/302 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             V++ +WN+N+L                 +    +  + +  D D++ +QE    +   
Sbjct: 25  GTVKIATWNVNSL----------------RARADRVEAWLERSDCDVLAIQETKCKDD-- 66

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ----SYPLLGAKDSF 137
                      +     + +            +A+  +      +      P+ G     
Sbjct: 67  --------NFPWELFERMGYEVAHFGVSQWNGVAIVSRVGLEDVERSFVDQPVFGKNGKD 118

Query: 138 SRAGNRRA--------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +    R          V  L   NG+ +    +  K         +  +        Q  
Sbjct: 119 AIQEARAIGATCGGVRVWSLYVPNGRALDDEHMPYKLSWLDMLKTHAQAWVTENPEAQIA 178

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            + DW    ++  V  +     N   +        ++  +                    
Sbjct: 179 LMGDWNIAPQDDDVWDIDFFRANAMTHVSEPERAAFRAFEDAGFQDVVRPHTPGP-GVYT 237

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+ +        +   S        D  + +GK  SDH P+ +
Sbjct: 238 YWDYTQLRFPKKEGMRIDFVLASPALAARVTGASI-------DREERKGKGASDHAPVIV 290

Query: 301 DY 302
           + 
Sbjct: 291 EL 292


>gi|238561644|ref|ZP_00441777.2| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4]
 gi|254200314|ref|ZP_04906680.1| exodeoxyribonuclease III [Burkholderia mallei FMH]
 gi|254209389|ref|ZP_04915735.1| exodeoxyribonuclease III [Burkholderia mallei JHU]
 gi|147749910|gb|EDK56984.1| exodeoxyribonuclease III [Burkholderia mallei FMH]
 gi|147750162|gb|EDK57233.1| exodeoxyribonuclease III [Burkholderia mallei JHU]
 gi|238524267|gb|EEP87701.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4]
          Length = 269

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 68/303 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ +WN+N+L+                     +  +    D D++ LQE         
Sbjct: 11  PMRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE--------- 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                             +    +    +  +A+  +       S P        +  G 
Sbjct: 46  -LKIPDEKFPREALEAAGYRSWFAGQKTYNGVAILAR------ASLPFDETDIVRNIPGF 98

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             A + L+      + ++  +  +   LDS +  Y        Q    L+ W+  + +  
Sbjct: 99  EDAQQRLIAATIDGVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLKDELQRY 152

Query: 203 VPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNAN 248
               + GD+N        +D         + P +                +  +      
Sbjct: 153 PKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFEQPEKTF 212

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++     +     +        D +    ++ SDH P+ 
Sbjct: 213 TWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPRTWEQPSDHTPVV 265

Query: 300 IDY 302
              
Sbjct: 266 AQL 268


>gi|34496332|ref|NP_900547.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472]
 gi|34102184|gb|AAQ58551.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472]
          Length = 257

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R  +WN+N+L                      + Q+      +++ LQE          
Sbjct: 1   MRFATWNVNSL----------------KVRLPQVLQWLAETGVEVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +      +         +  +A+  +           + A         R
Sbjct: 35  LKMDQGAFPLAEIEAAGYRAVWFGQKTYNGVAILARTPL----EMTDVVAGIPGYGDEQR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V+  +  +   +DS +  Y        +    L+ ++  +     
Sbjct: 91  RVIAATVN----GVRVICGYFVNGEAVDSPKYPYK------LEWLSKLEGYVAAELARHP 140

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD+N                         D F + I     L    +  +     
Sbjct: 141 QLLLLGDYNIAPEDRDVYDPEGWREQVLCSTPERDAFRRLIALG--LSDSFRLFNQEEKQ 198

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++                    D    + +R SDH P+
Sbjct: 199 YSWWDYRQMMFRRNKGVRIDHILVSDALKPRAQACEI-------DKAPRKWERPSDHTPV 251

Query: 299 SIDY 302
            +  
Sbjct: 252 VLTL 255


>gi|329911665|ref|ZP_08275588.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480]
 gi|327545815|gb|EGF30936.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480]
          Length = 256

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 83/302 (27%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L                      + Q+  +   D++ LQE  + +     
Sbjct: 1   MKLATWNVNSL----------------KVRLPQVLQWLADNPIDVLCLQETKTIDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    S    +  +A+  K               +       +
Sbjct: 41  ------KFPQAEIEAAGYHVAFSGQKTYNGVAILSKQPMTDVVRN------NPHFADEQQ 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   ++     + V+  ++ +    DS +  Y        +    L+ W+  +  +  
Sbjct: 89  RLIAATID----GVRVICAYIPNGQAPDSDKYQYK------LRWLDGLQQWLALEMAAHP 138

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPNDS-----------LIRFPKEKDSRCNANK 249
            F + GD+N        +D      + +                L    +  +       
Sbjct: 139 KFALLGDYNIAPEDRDVHDPAAWVGQILVSEPERAAFQRMIALELTDAFRLFEQADKLFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++ +                  D +  + ++ SDH P+  
Sbjct: 199 WWDYRQMGFRRNAGMRIDHILLSKELAAACTSCVI-------DKVPRKWEQPSDHTPVVA 251

Query: 301 DY 302
             
Sbjct: 252 TI 253


>gi|291515850|emb|CBK65060.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 313

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 71/291 (24%), Gaps = 34/291 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79
           + +R+ S+NI   +             R  +   ++ +  +  D DI   QE        
Sbjct: 47  EPIRVASYNIQYDNRN-------EEAGRWENRKEIVCRLLEAEDFDIFGAQEPYKFQIED 99

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +A   P  TW     T       +  +     T      ++        P +        
Sbjct: 100 MAAALPGYTWIGTSVTGEDNVERRHFNPIFYKTDKFEVLESGSFWYSETPNVPNTKFSDS 159

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R        +          +     F        + S  LL ++   +        
Sbjct: 160 YSPRMCNWAHFRVKATGKEFFHFNSH---FDHIGTVARAESAKLLIEKVAEIA------- 209

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKN----LRN 253
               P    GDFN        N        +D                N  K        
Sbjct: 210 -GKTPAFCTGDFNSNQQTNVYNTIVTSGTLVDSYARTTDKVNADWPSYNGYKYISTPPAK 268

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+  + +               +   +     K  SDH P+ I++ F
Sbjct: 269 ASRIDHIFVTKGRT--------KVQSWAIVNTSYSQKYPSDHFPVVIEWSF 311


>gi|150003207|ref|YP_001297951.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides vulgatus ATCC 8482]
 gi|254882487|ref|ZP_05255197.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294776025|ref|ZP_06741521.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|319640411|ref|ZP_07995133.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A]
 gi|149931631|gb|ABR38329.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides vulgatus ATCC 8482]
 gi|254835280|gb|EET15589.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294450163|gb|EFG18667.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|317387898|gb|EFV68755.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A]
          Length = 281

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 70/296 (23%), Gaps = 38/296 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           C       VR  ++NI   + Q+ ++ W             + Q+ K+ + DIV +QE+ 
Sbjct: 17  CAEEKKTDVRWATFNIRYDNPQDSLNNW-------QYRKDRVCQFIKDHELDIVGMQEVL 69

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                        +            +   +             +        P      
Sbjct: 70  HNQFQDLRAGLPEYDGIGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMM 129

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            +     R A     +        + ++     F    E     S  L+ ++ + +    
Sbjct: 130 GWDAVCVRIATWAKFKDKATGKIFMAVNTH---FDHVGEEARRQSALLIIRKIKEIV--- 183

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253
                   P V+ GDFN                   D+     +                
Sbjct: 184 -----GERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVD---YTFHDFAR 235

Query: 254 -----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   ID+  +         +                   LSDH P   D +F
Sbjct: 236 IPAEDCEKIDFIFVTPQVLVKSCEIPAEV----------PEALLSDHNPQLADLEF 281


>gi|289671150|ref|ZP_06492225.1| putative secreted protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 801

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 93/340 (27%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 184 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHMPDIL 243

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120
              E+ + + +  +  +       S ++   +     + +    I     V+        
Sbjct: 244 GTVEVENLSVLQTLAARVNADAVSSGQQDPKYVAYLQEGNDVGGIDVGFLVKTADTAGGV 303

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168
            RV   S    G   +++           R  + L   ++        +  + +H +S  
Sbjct: 304 PRVDVLSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTANVHQVDGRTLPLTAIVVHQRSLN 363

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225
             ++ +   +   +    QA++L   +   Q+       ++ GDFN      G  D    
Sbjct: 364 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 423

Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + ++   +
Sbjct: 424 VTGKPAPDAQTVVGGDGADLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANEALMR 483

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 484 LPQIASLSVGHSRINADFPGTARNDANTPTRLSDHDPTVV 523


>gi|257093975|ref|YP_003167616.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046499|gb|ACV35687.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 294

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 89/311 (28%), Gaps = 74/311 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+ ++NI+             +  R       +R   + +DADIVFLQE+   N   +
Sbjct: 2   KLRVATYNIH----------KGVTGIRGRPRIHDVRLALEAIDADIVFLQEVQDRN--ER 49

Query: 83  VFPKNTWCIFYS-------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           +     +                  +         H   A+  ++      ++ +     
Sbjct: 50  LAHHPGYPFGTQLDFLASGAYAHRAYGMNAVYPHGHHGNAILSRHRITESANHDI----- 104

Query: 136 SFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           S      R  +  +  +    G+++ ++ +HL                     +QA +L 
Sbjct: 105 SDHALEKRGLLHAVTRLGRGRGREVHLICVHLGLIK-------------RSRVRQATFLA 151

Query: 193 DWITQKKESLVPFVIAGDFNRK--------------------INYLGNNDDFWKTIDPND 232
           D++ ++  +  P +IAGDFN                                   +    
Sbjct: 152 DFVQREVPASAPLIIAGDFNDWQQRVDGLLRDRLGVQEVAVAATSPPPEGGLLDRLLSWR 211

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                   +        +    + +D   +            F  +        +   R 
Sbjct: 212 PASDA---QSGVSRTFPSFAPWLTLDRIYVRG----------FRVLDMQVPQGLA-WARC 257

Query: 293 SDHCPISIDYD 303
           SDH P+  + +
Sbjct: 258 SDHAPLIAELE 268


>gi|256784140|ref|ZP_05522571.1| exonuclease [Streptomyces lividans TK24]
 gi|289768021|ref|ZP_06527399.1| exodeoxyribonuclease III [Streptomyces lividans TK24]
 gi|289698220|gb|EFD65649.1| exodeoxyribonuclease III [Streptomyces lividans TK24]
          Length = 259

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 79/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ LQE     A    
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEAKVAEA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   R   +            +AV  +          L G          R
Sbjct: 41  ------QFPFDALREAGYEAAVHATGRWNGVAVLSRVGLEDVVKG-LPGDPGYEGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +D     Y        Q  + L+  +        
Sbjct: 94  A-----ISATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEVLRAAVEGDAAGGR 142

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N         D                   ++         P+      +  
Sbjct: 143 PFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAALASLRGAGLSDVVPRPLKYD-HPF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    ++   K +            D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|299145010|ref|ZP_07038078.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
 gi|298515501|gb|EFI39382.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
          Length = 264

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 84/311 (27%), Gaps = 59/311 (18%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ---------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M  +  ++L         S AQ          V+ +++N  +  +Q              
Sbjct: 1   MNFRICISLFLLCCLLQPSTAQQPVTKPKEVTVKAMTYNTYSGRKQG------------- 47

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                + +  K  + DIV LQE+     +               +        D      
Sbjct: 48  --IDKIAEVIKKENPDIVSLQEIERNTEINPWDTPKKLSELTGMKYYYFAHALDIPTGGD 105

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
               +  K     ++S+ L   K+       R    + V   GK+ +    HL       
Sbjct: 106 YGNVILSKYPVSEEKSFKLSVLKEGDY---VRSFGYVKVAKEGKEFYFATTHLDHKYEDA 162

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           +                + + + +   ++   P ++ GD N +         F K    N
Sbjct: 163 AR--------------LKQIDEILACVEQLDKPVILGGDLNSRRGSATM-AAFQKYFTVN 207

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                 P                   D+ +   N       E+F+   Y+      +   
Sbjct: 208 CLSDGAP-------WTVPVPSPAYACDWLIYTPN-------EAFTVKAYDVCYWADKE-- 251

Query: 292 LSDHCPISIDY 302
            SDH P+   Y
Sbjct: 252 -SDHYPVVATY 261


>gi|183599926|ref|ZP_02961419.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827]
 gi|188022200|gb|EDU60240.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827]
          Length = 301

 Score = 94.6 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 42/312 (13%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             K++++++N   L     +  +        +    + +     D DIV LQE+ + ++ 
Sbjct: 2   PHKIKVMTFNTYLL----HIPFFSIGASTQDARINAMIKDNIFYDVDIVILQEVFNTHSA 57

Query: 81  AKVFPKNTWCIFYST-------------------ERLINHSKRDSNNDIHTAIAVRKKNV 121
            K+F       F+                            + D    +++ IA+  +  
Sbjct: 58  QKLFSGMRSLGFFYHTPVAAQYNESVLSYCDSNHCWNAKKGEWDMVQQVNSGIAIVSRYP 117

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            V ++      A     R   +  V  ++EI GK + V+  HL+S    D      +   
Sbjct: 118 IVYREYQLFDDAGCGADRFSAKGGVRAVIEIEGKMLQVIGTHLQS----DDNFCLMTSPS 173

Query: 182 SLLSQQAQWLKDWITQKKESLVPF-VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           S    Q   L +W            ++ GD N               I   +     P+ 
Sbjct: 174 SHRKAQLTQLINWAETSITEDRQITILGGDLNINYGSEEYEQAL-DIIGWGEPHHFNPRP 232

Query: 241 KDSRCNA------NKNLRNKIPIDYFVMDQNAYKFLIQESFSE---ILYNEDDIKSRGKR 291
                          + R    +DY                       YN          
Sbjct: 233 SWDFSTNNVIREAYPDTRQSWHLDYIFAKNMRSIKQQTRVIKSKIGYNYNNKVFFDY--- 289

Query: 292 LSDHCPISIDYD 303
            SDH P+  + +
Sbjct: 290 -SDHYPVVAEIE 300


>gi|254785075|ref|YP_003072503.1| extracellular nuclease [Teredinibacter turnerae T7901]
 gi|237685604|gb|ACR12868.1| extracellular nuclease [Teredinibacter turnerae T7901]
          Length = 796

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 92/353 (26%), Gaps = 74/353 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ----------EGVSLWKNSVKRTTSDYTLLRQYAKNL 64
               +V+  +++ S+N+    +                  +S          L Q    L
Sbjct: 352 AFAPAVSGNLKVASFNVLNFFKTLAAAGVSTAAGHAPRGADSAAEFARQKNKLVQGLVGL 411

Query: 65  DADIVFLQEMGSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115
           +AD+V L E+ +          A+  +  +    +   T   +    R   +D I     
Sbjct: 412 NADVVGLIELENDFDQTNDNSTALELLVSELNSFLGGHTYDYVYPGTRFVGSDAIAVGFI 471

Query: 116 VRKKNVRVLQQSYP------------------LLGAKDSFSRAGNRRAVELLV--EINGK 155
            +   V V   + P                   +        A NR ++ +      +G+
Sbjct: 472 FKPAVVSVAAGTKPALLNDTVAASLEGFSGHDFVANPVFDGVASNRVSLAVSFAHLASGQ 531

Query: 156 KIWVLDIHLKSF---------CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVP 204
            + +   H KS                 +          Q A+ +  W+       +   
Sbjct: 532 VLTIAANHFKSKGRSGLTDLHSPDYDKSDGAGFWNQRRLQAARAVAAWLDTAPTGVAGQE 591

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            +I GD N             +     D +            +         +DY ++  
Sbjct: 592 RIILGDLNSYAMEDPIQYLLSQGYHNADPV---------GAYSYVFDGQVGTLDYMLVSD 642

Query: 265 NAYKFLIQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDY 302
                L +     I  +E D                     R SDH P+ + +
Sbjct: 643 ALSSTLEESLIWNINADEADALDYNLDFGRSPTYFNAASPLRSSDHDPVLVGF 695


>gi|126730184|ref|ZP_01745996.1| Endonuclease/exonuclease/phosphatase [Sagittula stellata E-37]
 gi|126709564|gb|EBA08618.1| Endonuclease/exonuclease/phosphatase [Sagittula stellata E-37]
          Length = 239

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 81/283 (28%), Gaps = 61/283 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVA 81
            +R+ S+NI            K        D   +      +DAD++ LQE        A
Sbjct: 12  SMRVASYNIR-----------KAVGLDWRRDPHRVVDVLGEIDADVIALQEADRRIGTRA 60

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V P +               +  S+     AI VR +    + +   L           
Sbjct: 61  GVLPLDRLETELGYIMTDVSIRPLSHGWQGNAILVRSRLFDHVAERILLPTM-------E 113

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R AV + +     ++  + + L                     +Q   L+  +   ++ 
Sbjct: 114 PRGAVSVRLRQPDLEVIGVHLGLTPGM---------------RRKQMLTLQKRL---EDC 155

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++AGDFN   +           + P  S                  R    +D FV
Sbjct: 156 DHPVLLAGDFNEWNSGRLPFAAPATVVSPGLSFHAS--------------RPTASLDRFV 201

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +           S            +  KR SDH P+ +D  F
Sbjct: 202 LGPGLR----SVSAHVHH------SALAKRASDHLPVVVDIAF 234


>gi|116050489|ref|YP_790692.1| exonuclease III [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296389031|ref|ZP_06878506.1| exonuclease III [Pseudomonas aeruginosa PAb1]
 gi|313107448|ref|ZP_07793636.1| exodeoxyribonuclease III [Pseudomonas aeruginosa 39016]
 gi|115585710|gb|ABJ11725.1| exodeoxyribonuclease III [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310880138|gb|EFQ38732.1| exodeoxyribonuclease III [Pseudomonas aeruginosa 39016]
          Length = 270

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 80/312 (25%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE          
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIERHQPDVIGLQE---TKVADDQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +    + +         H  +A+  +   +          ++S      R
Sbjct: 42  FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHRGFPSDGEES-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     +  G  I V++       F       +        +    L+  +    +  
Sbjct: 90  RFIWGTFSDAQGNPITVMN-----GYFPQGENREHPTKFPAKQRFYADLQSLLENSFKPE 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
              V+ GD N                        ++L    ++  T+     +  F    
Sbjct: 145 QALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALN 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +  +                  D      +
Sbjct: 205 PEVNDRFSWFDYRSRGFEDTPKRGLRIDVILASRVLQSRFKDAGI-------DYDLRGME 257

Query: 291 RLSDHCPISIDY 302
           + SDH PI ++ 
Sbjct: 258 KPSDHAPIWLEL 269


>gi|242372571|ref|ZP_04818145.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis
           M23864:W1]
 gi|242349788|gb|EES41389.1| Sphingomyelin phosphodiesterase [Staphylococcus epidermidis
           M23864:W1]
          Length = 329

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 90/302 (29%), Gaps = 33/302 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +++ + N+  L      +++ N  +   +D      Y +    D+V   E+    A
Sbjct: 36  SEDSLKITTHNVYFLPT----AIYPNWGQSQRADLISKADYIQGQ--DVVIFNELFDKKA 89

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLL 131
             ++         Y T  +    +                  + +  K   V Q+ +   
Sbjct: 90  SHRLLTNLQSQYPYQTPIVGKGIEGWQKTSGSYRKVKQVSGGVGIVSKWPIVQQEQHIYK 149

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               +  +  N+    + +  NGK   ++  HL++    +          S+   Q   +
Sbjct: 150 DGCGA-DKLSNKGFAYIKINKNGKYHHIIGTHLQA----EDPTCMKGKDQSIRQSQMNEI 204

Query: 192 KDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           K +I  +      P  I GD N  I            ++ +               +N  
Sbjct: 205 KQFIKDKHIPKNEPVYIGGDLNV-IKGSDEYQQMPDNLNVSLPTQFEGNPYSWDTQSNSI 263

Query: 251 LRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPI 298
            +          +DY ++D++  +     ++       +       +       SDH P+
Sbjct: 264 AKYNYPKLEPQHLDYILLDRDHAQPSSWHNYVHKTKAPEWSVKSWGKTYKYNDYSDHYPL 323

Query: 299 SI 300
           S 
Sbjct: 324 SA 325


>gi|86130803|ref|ZP_01049402.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
 gi|85818214|gb|EAQ39374.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
          Length = 350

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/353 (12%), Positives = 85/353 (24%), Gaps = 64/353 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQK------VRLVSWNINTLSEQ-------EGVSLWKNSVK 48
           ++  VLAL   L     + AQ+        +  +N+  L +        +          
Sbjct: 1   MKLKVLALSGLLTVTAFAKAQQDKTYRAHTIAFYNVENLFDTENDPITYDDDRTPDGKDH 60

Query: 49  RTTSDYT----LLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
            T   Y      + +    + AD+       + L E+ +   V  +          + + 
Sbjct: 61  WTEEIYQDKVSKMARVISEIGADVTNNAPALIGLAEIENRKTVEALANDPK---LLAKDY 117

Query: 98  LINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
            I H        I  A+       K   + +    +    D+  R   R  + +   ++G
Sbjct: 118 GIAHFDSPDRRGIDVALMYQKALFKPTNISKHELLIYDNVDTSKRVYTRDQLLVSGMLDG 177

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP---FVIAGDF 211
             I V+  H  S    ++       +       A  L   I    +S  P    +  GD 
Sbjct: 178 DMIHVIVNHWPSRSGGEARSRKKRIA-------AAALNMKIIDSLQSNDPYAKIITMGDL 230

Query: 212 NRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           N                    +  +                          D  ++    
Sbjct: 231 NDDPTSPSVKKTMKASGKKEKVKDDMLYNPMEPMFKKGIGTLAYRDGWNLFDQIIISAPL 290

Query: 267 YK------FLIQESFSEILYNEDDIKSRGKRL-------------SDHCPISI 300
                      +       Y  +                      SDH P+ +
Sbjct: 291 LDKDFSTYRYYKAGIYNKNYLSNPKGRYKGYPYRSFANGGYTGGYSDHFPVYV 343


>gi|218130390|ref|ZP_03459194.1| hypothetical protein BACEGG_01979 [Bacteroides eggerthii DSM 20697]
 gi|217987391|gb|EEC53721.1| hypothetical protein BACEGG_01979 [Bacteroides eggerthii DSM 20697]
          Length = 372

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/349 (10%), Positives = 87/349 (24%), Gaps = 62/349 (17%)

Query: 8   ALVFFLVPCTASV-------AQKVRLVSWNINTLSEQEGVSLWKNSVK-----------R 49
           ALVF     +A +           R++ +N+  L +    +L  +              +
Sbjct: 28  ALVFLAFLSSAPLYGQIKKDTLTFRIMGYNVENLFDCRHDTLKNDYEFLPDAVRHWNYFK 87

Query: 50  TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
                  + +    +       +V L E+ + + +  +     + I          +   
Sbjct: 88  YKKKLDAIARVIIAVGKWTPPALVALCEVENDSVLHDL---TRYSILREAGYRYVITHSP 144

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHL 164
               I  A+  ++   ++L     L       S    R  + +  + +N   + V   H 
Sbjct: 145 DERGIDVALLYQRGIFKLLSSQ-SLPVTGLHKSSRPTRDILHVSGLLLNRDTLDVFVAHF 203

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
            S          Y    +   + A      +    +     +I GDFN            
Sbjct: 204 PSRSGGAKASEPYRLLAAQRLKNATDSLFHVRTHPQ----IIIMGDFNDYPGNKSVQKIL 259

Query: 225 WKT--------IDPNDSLIRFPKEKDSR--CNANKNLRNKIPIDYFVMDQNAYKFLIQ-- 272
                      +          ++  +     + K       +D+ ++  N         
Sbjct: 260 KAGIPPAETDSLKSQMLYHLLARKSAANKHFGSYKYQGEWGLLDHIILSGNLLTATSPLY 319

Query: 273 -------------------ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                              +      +            SDH P+  ++
Sbjct: 320 TAEDKADVFHAPFLLTEDKKYGDNQPFRTYYGMKYQAGYSDHLPVWAEF 368


>gi|197105436|ref|YP_002130813.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
 gi|196478856|gb|ACG78384.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
          Length = 259

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 87/303 (28%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+++                +    + ++ +    D+  LQE+   +     
Sbjct: 1   MRIATWNVNSIN----------------ARLETVVRWFEAAQPDVACLQEIKCVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++        +  +A+  K            G  +       R
Sbjct: 41  ------KFPAEPFERLGYNLAIHGQKTYNGVALLSKRPLEDVTR----GLPEGDGDEHAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++     + + V  I+L +   + + +  Y  +          L        +   
Sbjct: 91  YIEAVV--SGPQPVRVASIYLPNGNPVGTEKFAYKLA------WMGRLHRHAQNLLKLEE 142

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                   +   +   ++ +        + +   +     
Sbjct: 143 PLVLAGDYNVIPEPRDAEFPKNWEDDALFQPQSRAAFRALKNLGLTEAYLQADGAPGAYT 202

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ ++   A   L   +    +          ++ SDH P+ +
Sbjct: 203 FWDYQAGAWQRNNGIRIDHALLSPQAADLLRGVTIHRDV-------RGWEKPSDHVPLVV 255

Query: 301 DYD 303
           + D
Sbjct: 256 ELD 258


>gi|113953146|ref|YP_731259.1| exodeoxyribonuclease III [Synechococcus sp. CC9311]
 gi|113880497|gb|ABI45455.1| exodeoxyribonuclease III [Synechococcus sp. CC9311]
          Length = 274

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 84/304 (27%), Gaps = 67/304 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWN+N                   +    +  + ++ +AD++ LQE            
Sbjct: 3   IASWNVN----------------SVRTRLDHVLNWLEHSEADLLALQET----------K 36

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            +             +         +  +A+  +      +        D         A
Sbjct: 37  VDDPQFPLEPFLQRGYQIHIHGQKAYNGVALISRTPLEDVRMGFSAELLDDAEAKEL-GA 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + ++      + V+++++ +   L S + +Y  S          L+ ++   +    P 
Sbjct: 96  QKRVISALIDGVRVVNLYVPNGSSLSSDKYSYKLS------WLSCLERYLRAIQTRDEPL 149

Query: 206 VIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            + GDFN  +                      +     + P+  L    +  +       
Sbjct: 150 CVMGDFNIGLEARDLPDPDRLTGGIMASDRERNALKAALGPD--LQDAFRLFEPNSGHWS 207

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+  +D+         S        D  +    + SDH P+ +
Sbjct: 208 WWDYRSGAWDRGRGWRIDHIYLDETLRAVARSCSI-------DKQERGRIQPSDHAPVVV 260

Query: 301 DYDF 304
           D  +
Sbjct: 261 DLAW 264


>gi|298386087|ref|ZP_06995644.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
 gi|298261315|gb|EFI04182.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
          Length = 611

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 84/304 (27%), Gaps = 63/304 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L +   L+       + +RL+++NI   +  +GV            D+  +    
Sbjct: 4   MKKIFLLISAILLIVPVQAQRTLRLMTYNIKNATGMDGVC-----------DFQRIANVI 52

Query: 62  KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   D+V +QE+    + +    V  +                     +     I +  
Sbjct: 53  NNASPDVVAVQEVDSVTNRSNQKYVLGEIAERTQMYACFAPAID----YDGGKYGIGLLS 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +  Q+  L G      R   R  +    E           HL              
Sbjct: 109 KKAPLHLQAIALPG------REEARALILAEFE----DYIYCCTHLSLTEED-------- 150

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                  +  + LK +    K+   P  +AGD N +                 +    F 
Sbjct: 151 -----RMKSLEILKTFAASYKK---PLFLAGDMNAEPESDFIK----------ELQKEFR 192

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              + + +       K  IDY    +   K     S   +              SDH PI
Sbjct: 193 ILSNPKQHTFPAPAPKETIDYVAAFKQNDKGFAVVSSEVVNEPV---------ASDHRPI 243

Query: 299 SIDY 302
            ++ 
Sbjct: 244 VVEL 247


>gi|254787392|ref|YP_003074821.1| extracellular nuclease [Teredinibacter turnerae T7901]
 gi|237685410|gb|ACR12674.1| extracellular nuclease [Teredinibacter turnerae T7901]
          Length = 935

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/352 (13%), Positives = 92/352 (26%), Gaps = 73/352 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
                V   +R+ S+N+  L +                 N+ +  T           +LD
Sbjct: 488 AAAPQVDGDLRVTSFNVLNLFKTLDNGASTALGHDPRGANNAEELTRQLQKTVNAIVSLD 547

Query: 66  ADIVFLQEMGSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAV 116
           AD++ L E+ +          A+  +       +  +T   +    R   +D I   +  
Sbjct: 548 ADVLGLVELENEFDPVNDGSTAIEMLVNALNSRLGSNTFAYVYPGSRFVGSDAIAVGVIY 607

Query: 117 RKKNVRVLQQ------------------SYPLLGAKDSFSRAGNRRAVELLVE--INGKK 156
           +   V +                      +  +        + NR ++ +       G  
Sbjct: 608 KPAVVAIADGSAPAILDDTVAATLPIFADHDFVNEPLFDGPSTNRASLAVTFTHISGGDN 667

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSC---------SLLSQQAQWLKDWITQKKE--SLVPF 205
             V+  HLKS    D L +    +                A+ +  W+       +    
Sbjct: 668 FTVVVNHLKSKGSGDGLASDDPNADHTDGAGAWNQRRLDGARAVDAWLQTAPTGIADNDA 727

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           +I GD N                   +S         +   +         +DY ++  +
Sbjct: 728 IIMGDLNAYAAEAPLTFLLSNGYSNVES---------AESYSYVFDGQVGTLDYVLLSDS 778

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRL---------------SDHCPISIDY 302
            Y    Q     +  +E D                       SDH P+ +  
Sbjct: 779 LYSKFEQAEIWHVNSDEADALDYNTDYGRSLTYYDGSTATRNSDHDPVLVGL 830


>gi|312883008|ref|ZP_07742739.1| hypothetical protein VIBC2010_06964 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369168|gb|EFP96689.1| hypothetical protein VIBC2010_06964 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 357

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 93/304 (30%), Gaps = 21/304 (6%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +   S N+             ++    +         +     L+ADI+ LQE+ 
Sbjct: 53  PKEKTLTFASANLFNFLAPPNACYEFDNIYDNQAWQDKCRWTQHTLAELNADIIGLQEVF 112

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           S     ++  +  +  +++T       K         A+A R   +  +  S  L     
Sbjct: 113 SIGCARELMAEIGYP-YFATVDEPEVEKDYIYAKPVVALASRYPIISCMAVS-ELTNHDH 170

Query: 136 SFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCF----LDSLENTYSPSCSLLSQQAQW 190
                 +R+ +   +EI    K+ V   HLKS                 S      +A  
Sbjct: 171 LNIPNFSRKPICAHIEIPKLGKMTVYVCHLKSQRPTETEDLEPLVARWLSAIQRGWEAAM 230

Query: 191 LKDWIT-QKKESLVPFVIAGDFNRKINYL---GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           L+ ++  +  +   P V+ GD N+ ++        +    T D N               
Sbjct: 231 LRAFMQTEYAKCPTPTVLMGDMNQSLSSDILASLTEPAHTTTDLNLKDSWSLFGTPDSRV 290

Query: 247 ANKNLRNKI-PIDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  K   +DY ++ Q            I +      +  +    + +  SDH  ++
Sbjct: 291 PTHYHYAKGNVLDYLLVSQEFDPDWPCSMLEIADYIVLDKHLINPHSQQDRYASDHAFVA 350

Query: 300 IDYD 303
           +  +
Sbjct: 351 LTVN 354


>gi|304391804|ref|ZP_07373746.1| exodeoxyribonuclease III [Ahrensia sp. R2A130]
 gi|303296033|gb|EFL90391.1| exodeoxyribonuclease III [Ahrensia sp. R2A130]
          Length = 265

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 89/301 (29%), Gaps = 62/301 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWNIN                   + + +L ++ K  + DIV LQE+ S +     
Sbjct: 1   MKIASWNING----------------IKARHDVLIEWLKQAEPDIVGLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S    + ++ +         +A+  +           L  +        R
Sbjct: 41  ------NFPASEIEALGYNVQTHGQKGFNGVALLSRLPFDEVNRGLPLLRESEDEDEQAR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +  I GK + V+ ++L +   +D              +    L  W   +     
Sbjct: 95  F-IEGVFSIEGKSLRVVSLYLPNGNPVDDP-----RKFDYKLRWMDRLHAWAADRLALEE 148

Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANK 249
           P ++AGD+N                  +  +++  RF   K+                  
Sbjct: 149 PLILAGDYNVIPQPNDCWNPKVWEGDALFRDETRSRFEALKNLGFTEALRSSANADGIYT 208

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ +M   A                D      ++ SDH PI +
Sbjct: 209 FWDYQAGAWPKNHGIRIDHLLMSAEAADMFNGCGI-------DSFVRDWEKPSDHVPIWL 261

Query: 301 D 301
           +
Sbjct: 262 E 262


>gi|160888829|ref|ZP_02069832.1| hypothetical protein BACUNI_01248 [Bacteroides uniformis ATCC 8492]
 gi|317479428|ref|ZP_07938561.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|156861728|gb|EDO55159.1| hypothetical protein BACUNI_01248 [Bacteroides uniformis ATCC 8492]
 gi|316904394|gb|EFV26215.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 352

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 91/350 (26%), Gaps = 65/350 (18%)

Query: 8   ALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSV-----------KRT 50
            ++F L P  +   Q        R+VS+N+  L +    +L  +              + 
Sbjct: 9   VILFLLCPYISLYGQEGKDTLTFRIVSYNVENLFDSRHDTLKNDYEFLPDATRHWNYSKY 68

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +            +V L E+ + + +  +     +      +     ++   
Sbjct: 69  RKKLDNIARVIIATGGWTPPALVALCEVENDSVMRDL---TRYSALREADYRYVMTQSPD 125

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLK 165
              I  A+  ++   ++L     L   K   +    R  + +  + +N   + VL  H  
Sbjct: 126 KRGIDVALLYQRNLFKLLSYQ-SLPVDKPRKNSRPTRDILHVSGLLLNRDTLDVLVAHFP 184

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDD 223
           S             S       A+ +K  I            V+ GDFN         + 
Sbjct: 185 SRSGG------ARESEPYRLLAARKVKHAIDSLYTIRRHPQIVLLGDFNDYPENKSVKEV 238

Query: 224 F--------WKTIDPNDSLIRFPKE--KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                      ++ P         +        + K       +D+ ++     +     
Sbjct: 239 LEAAAPSTLQDSLRPQKLYHLLAGKAKTRKHFGSYKYQGEWGLLDHIIVSGTLLQEHAPL 298

Query: 274 SFSEI---------------------LYNEDDIKSRGKRLSDHCPISIDY 302
              E                       +            SDH P+  ++
Sbjct: 299 YTEEAKADVFCLPFLLTRDKKYGGQQPFRTYYGMKYQGGYSDHLPVYAEF 348


>gi|85716516|ref|ZP_01047487.1| Exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A]
 gi|85696705|gb|EAQ34592.1| Exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A]
          Length = 279

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 84/305 (27%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ +WN+N                        L  +      D+V LQE+         
Sbjct: 14  MRIATWNVN----------------SIRQRLDHLITWLGETTPDVVCLQEIKCVDEQFPR 57

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +                      +A+  K      +        D  SR  
Sbjct: 58  EAIEALGYNVVTH------------GQKTFNGVALLSKFPFDETRPRLAGDDGDVQSRF- 104

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E +V +    + +  ++L +    ++ +  Y        +    L ++  ++ +S
Sbjct: 105 ----LEGVVSLKQGIVRIACLYLPNGNPPNTEKYPYK------LKWISRLIEYSKERLKS 154

Query: 202 LVPFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCNA 247
              FV+AGDFN               +D  ++              L    +        
Sbjct: 155 EEAFVLAGDFNVIPAPRDVYNPASWVDDALFRPHTRQAFQTLLGLGLTDALRAASDAAGE 214

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   L            D      ++ SDH P+
Sbjct: 215 YTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLGGVGI-------DRHVRGWEKASDHVPV 267

Query: 299 SIDYD 303
            ID D
Sbjct: 268 WIDLD 272


>gi|288803857|ref|ZP_06409283.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica
           D18]
 gi|288333691|gb|EFC72140.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica
           D18]
          Length = 347

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 102/351 (29%), Gaps = 64/351 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-VRL---VSWNINTLSEQEGVSLWKN-----------S 46
           +RK +L L   ++  T++ AQK   +     +N+  L +        +           +
Sbjct: 1   MRKLLLVLFCAVLFGTSASAQKKFSVYAIGFYNVENLFDTTHDEGKNDHDFTPTGSYQWN 60

Query: 47  VKRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             + +     +      +  D+        + L E+ + + +  +  +            
Sbjct: 61  EMKYSHKLHNMASVLAEMGTDVLPNIGCAAIGLAEVENDHVMNDLISQPE---LAKRGYK 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +   +  I  A+    K   V      P +      S    R  + +   + G+ +
Sbjct: 118 YVHIEGPDHRGIDCALIYNPKLFTVRDTKLVPYVYDLPKDSTRATRGFLTVSGTLAGEHV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            ++  HL S                    Q + LKD +  +++  V  ++ GD N     
Sbjct: 178 TIIVCHLPSRGAGSYYRELGGK-------QIKALKDSL-LREDPKVKVLVMGDMNDDPTN 229

Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
              ++      +       +     +         + +        D  +M  N      
Sbjct: 230 KSIHECLSAKGEISEVGANDMYNPWYNVLVKEGTGSLQYQGKWNLFDQIIMTPNLLNKAG 289

Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPIS 299
           ++ FSE+ + ++ I  R                           SDH P+ 
Sbjct: 290 KKDFSELKFWKNQIFRRDYLFQESGKYKGNTKRTTAGGVWLDGYSDHLPVV 340


>gi|229822156|ref|YP_002883682.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
 gi|229568069|gb|ACQ81920.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
          Length = 437

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 80/306 (26%), Gaps = 58/306 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74
            +R+++WNI+T    +   +              +    +    D+V L E+        
Sbjct: 52  DLRVMTWNIHTAVAPDAPGVVDEP---------RIAAVIRAEAPDVVVLNEVHRDAPGPG 102

Query: 75  ---GSYNAVAKVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-QSYP 129
                   +A++   + +   ++    +    +            V  ++  V      P
Sbjct: 103 SHGDQPARLAELLAADGYVHTWFGLTEVDLPHEGAVLPGSSNGNVVMSRHPFVGGGVVVP 162

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L            R  + + V++ G    V+     S      L             Q +
Sbjct: 163 LPNENYEPGGKLRRSLLTVTVDVPGLGDVVVHATHLSTPGSAVLVEDQKE-------QLR 215

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGN-----NDDFWKTIDPNDSLIRFPKEKDSR 244
            + D +  +    VP V+AGD N     +       N+     I  +     + +  D  
Sbjct: 216 IVLDHVDAR----VPSVLAGDLNIWTTDVPTQPYSQNNLMQSWIAEDHLADTWRQVNDPG 271

Query: 245 CNANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                               IDY              S               +  SDH 
Sbjct: 272 AGPTMTASYGRPESPHPDRRIDYVFATPAFDVVAGHVSLV------------DRFASDHL 319

Query: 297 PISIDY 302
            + +D 
Sbjct: 320 GVVMDL 325


>gi|15597741|ref|NP_251235.1| exonuclease III [Pseudomonas aeruginosa PAO1]
 gi|218891476|ref|YP_002440343.1| exonuclease III [Pseudomonas aeruginosa LESB58]
 gi|9948603|gb|AAG05933.1|AE004682_5 exodeoxyribonuclease III [Pseudomonas aeruginosa PAO1]
 gi|218771702|emb|CAW27476.1| exodeoxyribonuclease III [Pseudomonas aeruginosa LESB58]
          Length = 270

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 80/312 (25%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE          
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIERHQPDVIGLQE---TKVADDQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +    + +         H  +A+  +   +          ++S      R
Sbjct: 42  FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHRGFPSDGEES-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     +  G  I V++       F       +        +    L+  +    +  
Sbjct: 90  RFIWGTFSDAQGNPITVMN-----GYFPQGENREHPTKFPAKQRFYADLQSLLENSFKPE 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
              V+ GD N                        ++L    ++  T+     +  F    
Sbjct: 145 QALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALN 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +  +                  D      +
Sbjct: 205 PEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVLQSRFKDAGI-------DYDLRGME 257

Query: 291 RLSDHCPISIDY 302
           + SDH PI ++ 
Sbjct: 258 KPSDHAPIWLEL 269


>gi|291302070|ref|YP_003513348.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290571290|gb|ADD44255.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 268

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 81/303 (26%), Gaps = 57/303 (18%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           ++AL   +V         VR++++NI                     +        +  D
Sbjct: 17  IVALTGPVVATPQEAKSVVRVLNYNIQAGRGAGEDPNVDPP------NIPRTAAAIREHD 70

Query: 66  ADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            DIV LQE+        + VA++  +     ++          +          A+  K 
Sbjct: 71  PDIVTLQEVHQPDTSGADQVAQLAAELDMNAYFGPADGNGSGGQA-------GNAILTKL 123

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             V + +  L    D+ +    R      +++ G     +     S    D++       
Sbjct: 124 PIVERVNRRLPDDPDTNNVK--RALAGAKLDLGGGAFIRVFTTHLSPGLSDAV------- 174

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            +    Q +W  D++        P +  GDFN +      +         +      P  
Sbjct: 175 VAEREAQGRWALDYL----SHSGPLLFTGDFNERP-ENRIHAWALADGFADTGGEVAPDP 229

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+                                 SDH P+ I
Sbjct: 230 THGD----------ARIDFVYARG---------------VTATAGLVPDTDASDHRPVVI 264

Query: 301 DYD 303
           D +
Sbjct: 265 DLE 267


>gi|226228652|ref|YP_002762758.1| hypothetical protein GAU_3246 [Gemmatimonas aurantiaca T-27]
 gi|226091843|dbj|BAH40288.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 1078

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/338 (12%), Positives = 88/338 (26%), Gaps = 55/338 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWK-----------NSVKRTTSDYTLLRQYAKN 63
               SV   +R+ S+N+           +            +S                 
Sbjct: 648 TTPTSVGGTLRVSSFNVLNYFNSFSGCTYGVGGGSTDCRGADSQTEFNRQVPKTVAALMG 707

Query: 64  LDADIVFLQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
           L+AD++ + E+ +             + +      NT+    +       +   ++  I 
Sbjct: 708 LNADVLGIVEIENDGYGTSSAIAHLVSQLNAQAGPNTYAFINADAATGQTNALGTD-AIK 766

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKD---SFSRAGNRRAVELLV-EINGKKIWVLDIHLKSF 167
            A+  +   V  +  +  L              NR A+     + +G +   +  H KS 
Sbjct: 767 VALIYKPARVTPVGNTAALNSVAFVNGGDGAPRNRPALAQAFQQADGARFIAVVNHFKSK 826

Query: 168 ---CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNND 222
              C      +      ++    A  L++W+T           +I GD N          
Sbjct: 827 GSACNAGDAGDGQGNCNAVRVAAATQLRNWLTTNPTGTGDPDVLILGDLNAYAKEDPI-- 884

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                +     +            +         +D+ +   +    +   +   I  +E
Sbjct: 885 ---MVLRNAGFIDLLESRIGPNAYSYVFDGQWGYLDHAMASSSIASQITGVTTWHINADE 941

Query: 283 DDIKSRG-----------------KRLSDHCPISIDYD 303
             I                      R SDH P+ I   
Sbjct: 942 PSILDYNTDYKSAGQIVSLTDNSAFRTSDHDPVLIGLT 979


>gi|148975846|ref|ZP_01812635.1| Endonuclease/exonuclease/phosphatase [Vibrionales bacterium SWAT-3]
 gi|145964591|gb|EDK29844.1| Endonuclease/exonuclease/phosphatase [Vibrionales bacterium SWAT-3]
          Length = 430

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 96/296 (32%), Gaps = 32/296 (10%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               S A  + ++++N+  L         ++           + +  K+   D+VF+QE+
Sbjct: 158 TTPPSDANSINILTYNVWLLPYIGEYMNDRDI---------RIAEAVKSH--DVVFMQEV 206

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  ++         Y + +L        +N     +    K   V Q  + +    
Sbjct: 207 FRRENELRLNADMRLHFQYVSHKLDG----GGSNTYDGGVITYSKYPIVEQAQH-VFDNC 261

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                A ++  +   +  + +   + ++HL S+              ++  +Q   +  +
Sbjct: 262 RGTDCAADKGVLYTKIIKDSRPYHLFNLHLGSW--------NSREHRNIRMRQVGEILAF 313

Query: 195 ITQ-KKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-----A 247
           + Q       P +  GDFN  K  +  +     + +D  +  ++               +
Sbjct: 314 VEQLGLPENEPVIFGGDFNIAKHKFPLDFTQMLRVLDLQEPPLKGSLAHSYDPLVNQNLS 373

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +   +  +DY +   N            +  N DD       LSDH  +S  ++
Sbjct: 374 DSDQSAQERLDYLLYSNNGSVVASSSKIEVL-RNFDDDMWGVWDLSDHLAVSARFE 428


>gi|123965783|ref|YP_001010864.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9515]
 gi|123200149|gb|ABM71757.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9515]
          Length = 281

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 84/301 (27%), Gaps = 63/301 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   +  + +  + KN++ DI+ LQE    +       
Sbjct: 3   IATWNVN----------------SVRTRLSQIINWIKNVNPDILCLQETKVIDN------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   +    + +         +  +A+  K               +  S   N   
Sbjct: 41  ----SFPLTPFEELGYEVTVHGQKSYNGVAIISKFKIENIIKG-FTNENEEKSNFLNFNE 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + L+  +   + ++++++ +   LDS +  Y        +    L  ++ ++       
Sbjct: 96  QKRLISADINGLKIINVYVPNGSSLDSDKFDYK------IKWLNHLSSFLDKQVREDDLV 149

Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPN-------DSLIRFPKEKDSRCNANKNL 251
              GDFN     +  +             I+            I   +  +         
Sbjct: 150 CFVGDFNIAPFDIDIHCPQKYEGGIMASKIEREALKKVIKGRFIDSFRIFEKNTGHWSWW 209

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+  +  N    L            +  +    + SDH P+ I+ 
Sbjct: 210 DYRNNAYELNKGWRIDHIYISNNLSSQLKSCVI-------ERSQRENSQPSDHAPVLINL 262

Query: 303 D 303
           +
Sbjct: 263 E 263


>gi|87123786|ref|ZP_01079636.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9917]
 gi|86168355|gb|EAQ69612.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9917]
          Length = 276

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 80/304 (26%), Gaps = 68/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ SWN+N+L                      +  +      D++ LQE  +       
Sbjct: 1   MRIASWNVNSLRT----------------RLDHVLNWLNAAQPDLLCLQETKVADPQFPL 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    W                     +  +A+  +      +       + +   A 
Sbjct: 45  EAFTSRGWQATVH------------GQKAYNGVALVSRTPLEDVR--LGFSGELADEEAE 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                + ++      + V+++++ +   L   +  Y        +    L+ ++ + +E 
Sbjct: 91  ELGTQKRVISALLDGVRVVNLYVPNGSSLKLEKYPYK------LRWLACLQRYLQRPQER 144

Query: 202 LVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNA 247
             P  + GDFN  +     +D                       D+L    +  +     
Sbjct: 145 GEPLCVVGDFNIALESRDMHDPDRLTGGIMASEPERAALKAALGDTLHDVFRVFEPDTGH 204

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  +                       +    + SDH P+
Sbjct: 205 WSWWDYRSGAWDRDRGWRIDHIYLCDELLARARGCLIH-------KQERGRDQPSDHAPV 257

Query: 299 SIDY 302
             D 
Sbjct: 258 VADL 261


>gi|333003732|gb|EGK23268.1| exodeoxyribonuclease III [Shigella flexneri VA-6]
          Length = 268

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   +  +                R
Sbjct: 42  FP-------LEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRR-----GFPGDDEEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +       +Q  Q L++++  + +   
Sbjct: 90  RIIMAEIPSLLGYVTVIN-----GYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDN 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                          L    ++   +     +  F     
Sbjct: 145 PVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGVVDTFRHANP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q   +  ++          D      ++ S
Sbjct: 205 QTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGI-------DYEIRSMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWATF 266


>gi|329298723|ref|ZP_08256059.1| exonuclease III [Plautia stali symbiont]
          Length = 268

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 83/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 S    L    +    D++ LQE         +
Sbjct: 1   MKFISFNINGL----------------RSRPHQLAALVEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   V  +       +DS      R
Sbjct: 42  FP-------LEEVSKLGYNMFYHGQKGHYGVALLTKTQPVAVRRGFPDDGEDS-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +        +  + L+ ++ Q+  +  
Sbjct: 90  RLIMAEIPSPIGDITVIN-----GYFPQGESRDHPIKFPAKEKFYRDLQSYLEQQLAADK 144

Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                        ++L    ++   +     +  + ++  
Sbjct: 145 PVLIMGDMNISSTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLQWGLVDTWREKNP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +         I           D       + S
Sbjct: 205 ETADRFSWFDYRSKGFDDNRGLRIDLLLASPPLASRCIDSGI-------DYAIRSMDKPS 257

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 258 DHAPVWSSF 266


>gi|329889440|ref|ZP_08267783.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328844741|gb|EGF94305.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 251

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 76/284 (26%), Gaps = 50/284 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAVA 81
           RL+++N++     +              D   +       + D+V LQE+    +     
Sbjct: 3   RLLTYNVHRCVGVDR-----------KLDVHRIADVIAEHEPDVVCLQELDVGRARTGWV 51

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                    +  S +                  A+       L ++  L           
Sbjct: 52  DQADAIAQRLAMSVQFHPAMKVEA----ELYGDAILTHRPERLVRAAALPTLPGLKG-LE 106

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQKK 199
            R A+   V+ +G  + +L+ HL                      Q   L  +DW+    
Sbjct: 107 PRGALWSAVDFDGVVVNILNTHLGLVP-------------REQRLQVAALVGRDWLGDPM 153

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P ++ GDFN   +         + +D                    +    I ID+
Sbjct: 154 -CDGPTILTGDFNAT-SITRPYQALTRRLDDAQR----RLGLKPSIKTFPSSFPAIRIDH 207

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +                         +  SDH P+ ID++
Sbjct: 208 CFVSRE---------IRVTGARTPSSP-LARAASDHLPLIIDFE 241


>gi|323702006|ref|ZP_08113675.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533092|gb|EGB22962.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum nigrificans
           DSM 574]
          Length = 229

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 79/282 (28%), Gaps = 57/282 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q +++VS+NI      +              +   +        A ++ LQE+  +   +
Sbjct: 2   QTIKVVSYNIRYARGMDD-----------QVNLNRVAAVLAWSGAQLMGLQEVDKHLPRS 50

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +     +      +               AV      +  + YPL        +  
Sbjct: 51  GFRHQAKHLGWLLHRHWVFAPNVKWGPWAQYGNAVLSYWPIIEHKHYPLPS------KGE 104

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +E+ V IN + +     HL                     ++ + ++  +     +
Sbjct: 105 PRGLLEVEVNINNRAVAFFCTHLGL----------------SREERLEQVEIILKVMTAA 148

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++ GDFN   +     +   + +    ++    +             +   +D+  
Sbjct: 149 NKPSILVGDFNDDRDSQ-EFNLISRLLQDATAITGGFE---------TFPADNEQLDFVF 198

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +      +                  R SDH P+ ++  
Sbjct: 199 VSHHWQVLAARPII--------------SRASDHLPVLVELS 226


>gi|294667686|ref|ZP_06732898.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292602526|gb|EFF45965.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 1193

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/340 (11%), Positives = 93/340 (27%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120
              E+ + + +  +  +       + ++   +     + +    I     V+        
Sbjct: 638 GTVEVENLSVLQTLAARVNADAVAAGQQDPRYVAYLQEGNDVGGIDVGFLVKTADIAGGV 697

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168
            RV   S    G   +++           R  + L   ++        +  + +H +S  
Sbjct: 698 PRVEVLSIAQEGKTATWTEPAGGVSLLNDRPPLVLTANVHQADGRTLPLTAIVVHQRSLN 757

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225
             ++ +   +   +    QA++L   +   Q+       ++ GDFN      G  D    
Sbjct: 758 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 817

Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + ++   +
Sbjct: 818 VTGKPAPDAQTVVGGDGADLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANEALMR 877

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 878 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917


>gi|294627209|ref|ZP_06705796.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292598448|gb|EFF42598.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
          Length = 1193

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/340 (11%), Positives = 93/340 (27%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120
              E+ + + +  +  +       + ++   +     + +    I     V+        
Sbjct: 638 GTVEVENLSVLQTLAARVNADAVAAGQQDPRYVAYLQEGNDVGGIDVGFLVKTADIAGGV 697

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168
            RV   S    G   +++           R  + L   ++        +  + +H +S  
Sbjct: 698 PRVEVLSIAQEGKTATWTEPAGGVSLLNDRPPLVLTANVHQADGRTLPLTAIVVHQRSLN 757

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFW- 225
             ++ +   +   +    QA++L   +   Q+       ++ GDFN      G  D    
Sbjct: 758 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAMGT 817

Query: 226 -----------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + ++   +
Sbjct: 818 VTGKPAPDAQTVVSGDGADLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANEALMR 877

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 878 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917


>gi|116254404|ref|YP_770242.1| phosphatase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115259052|emb|CAK10163.1| putative phosphatase [Rhizobium leguminosarum bv. viciae 3841]
          Length = 288

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 83/322 (25%), Gaps = 79/322 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80
           +   S+NI      +G             D   + +      AD++ LQE+    S N  
Sbjct: 1   MNFASYNIQYGFGLDG-----------RYDLARIARSL--EGADVIALQEVTRGFSRNGF 47

Query: 81  AKVFP------KNTWCIFYSTERLINHSKRDS-----NNDIHTAIAVRKKNVRVLQQSYP 129
           A +         + + ++     +   +                  V  +   V  ++  
Sbjct: 48  ADMAADIASFFPDYFWVYGPACDMHVEADEGGLQPVRGTRFQFGNMVLSRWPIVSTRTLL 107

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L  ++        R A E +++  G  I V  +HL                     +Q +
Sbjct: 108 LPRSRTIGKINLQRGATEAVIDAPGGAIRVYSVHLDHVSAD------------ERIRQLE 155

Query: 190 WLKDWITQKKESL-----------------VPFVIAGDFNRKINYLGN-------NDDFW 225
           +L   I    +                     +VI GDFN +                + 
Sbjct: 156 FLNAHINAFVQEGGSLTGGGEFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAGGGYYG 215

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
           +       +  F   K     +           ++ +DY  +       L          
Sbjct: 216 RVARIGTPVDAFAALKTYSPESYSWMDPEDHGKRMHLDYCFVSCGLQSRLKSAWI----- 270

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+ ++ 
Sbjct: 271 ------DTQSVGSDHFPLWVEI 286


>gi|110798703|ref|YP_695757.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens ATCC 13124]
 gi|110673350|gb|ABG82337.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens ATCC 13124]
          Length = 262

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 93/291 (31%), Gaps = 45/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+    + +  + W       +     + +  K+   DI+  QE   +      
Sbjct: 4   LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137
              + +         +   +  +  D   AI   K    VL+         P +     F
Sbjct: 57  DLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109

Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           + +  R   +L +  +I+G KI + + HL         E        ++ ++ +      
Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRN 253
              K    P++I GDFN  +     N    +  +     + +   K              
Sbjct: 159 KNYKIYKTPYIIMGDFNCYLEDNIFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY 218

Query: 254 KIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               IDY +  +                N DD K  G   SDH P+  + +
Sbjct: 219 DGRIIDYILYSKE---------CEIKSLNIDDRKINGGYPSDHYPVICELE 260


>gi|121999171|ref|YP_001003958.1| endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1]
 gi|121590576|gb|ABM63156.1| Endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1]
          Length = 277

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 80/293 (27%), Gaps = 54/293 (18%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIV 69
           +      +R+VS+NI           +     +          +   +  + +    D+V
Sbjct: 21  SPEAPATIRVVSYNIQNAIATSRYHHYFTRGWKHVLPDRQRQGNLERIGGWIEPY--DLV 78

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+ + +       +     + +              + +     ++ N  + +    
Sbjct: 79  GLQEVDAGSFRTGFMNQVEHLAYKADFP-----YWYIQTNRNMGRLAQQSNGLLARYRPA 133

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            +           R A+++      + + V+ +H+                     +Q  
Sbjct: 134 EIREHRLPGLIPGRGALQIRFGSGSEALNVIQVHMALG-------------RRTRMRQMD 180

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +L + +          ++ GD N + +           +                 +   
Sbjct: 181 FLAELVNAH----RHIIVMGDLNCQADSPE-------LLRLGRRTDLSEPIH--GLHTFP 227

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + R K  ID+ ++                       +     LSDH PI+++ 
Sbjct: 228 SWRPKHNIDHILISSTL--------------QVQRARVLEHALSDHLPIAMEL 266


>gi|77464360|ref|YP_353864.1| endonuclease/exonuclease/phosphatase fa [Rhodobacter sphaeroides
           2.4.1]
 gi|77388778|gb|ABA79963.1| possible Endonuclease/Exonuclease/phosphatase fa [Rhodobacter
           sphaeroides 2.4.1]
          Length = 339

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 91/341 (26%), Gaps = 62/341 (18%)

Query: 21  AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72
           A+ +R+ ++N+   +    +   +        R      +    L      LDAD + + 
Sbjct: 2   ARPLRIATYNVEWFNGLFDDHGRLRTDNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61

Query: 73  EMGSYN-------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           E  + +                   A   V    +                  ++   +A
Sbjct: 62  EAPNQSRRRSTVKALETFARTFGLRASRAVLGFPSETEQEIALLYDPSRIEAHHDPQSSA 121

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            A R   V               FS+     A+      +G  + V+ +H KS     + 
Sbjct: 122 RAPRFDEVFRFDIDVDATPEAIRFSKPPLELALRA----DGHPLRVIGVHAKSKAPHGAR 177

Query: 174 ENTY--SPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---- 224
                         QQ     WL+  +          ++ GDFN           F    
Sbjct: 178 NPAEAVRIGIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPGLDEYEKLFGRSG 237

Query: 225 ------------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY 267
                        +  +P+  +    +      +A           +  +D+ ++  +  
Sbjct: 238 IEIVLGLEEPPELRLHEPHARMALTQRVGIQPSSARFWLAPEQQYFEALLDFIMVSADLA 297

Query: 268 KFLIQESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303
               +            +   +++      SDH P+++D D
Sbjct: 298 AKSPRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDID 338


>gi|115360332|ref|YP_777469.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
 gi|115285660|gb|ABI91135.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
          Length = 269

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 88/286 (30%), Gaps = 56/286 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  A   + +R+ ++NI                K  T     + Q    LDAD++ LQE+
Sbjct: 20  PPAAPGGRDLRIATYNIRG-----------GYGKWHTRAAHRIAQVIHELDADVIALQEV 68

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                     P     +  +T             +     AV  +      ++  L    
Sbjct: 69  PLGGTH---APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDL---- 121

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            SF +   R A++  ++ +   I V+  HL               S S  S Q Q L   
Sbjct: 122 -SFHQREPRGALDADIDSSAGMIRVVATHLGL-------------SASERSAQVQRL--- 164

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +       +P ++ GD N         + F +       + RF +    R          
Sbjct: 165 LAAFDTGAMPVILMGDIN---------EWFVRGRALRALVTRFRRAPAPRTFPTLYPVFS 215

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +D   +     ++L+  +             R +R SDH P+  
Sbjct: 216 --LDRIWIHPG--EWLVDVNVH--------RSMRARRASDHYPLVA 249


>gi|239994244|ref|ZP_04714768.1| exodeoxyribonuclease III [Alteromonas macleodii ATCC 27126]
          Length = 269

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 78/311 (25%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN                   +    L+        DI+ LQE  + +     
Sbjct: 1   MKVISFNING----------------IRARLHQLQAVIDAHQPDIIGLQEIKVHNEQFPV 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A   K   +       +G       A 
Sbjct: 45  EAVEAMGYHVYFH------------GQKSHYGVAFLAKKEPLSVS----MGFPTDDEDAQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    +  G+ + VL+       F       +        +  + L  ++      
Sbjct: 89  RRMIILKTTDDAGEPVTVLN-----GYFPQGENEKHETKYPAKRKFYKDLMTYLDDNHTP 143

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
               ++ GD N                          L    ++  T+        F   
Sbjct: 144 DDNVIVMGDVNISHTDLDIGIGEDNRKRWLKTGKCSFLPEEREWLNTVIDWGFEDSFRTL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +  +  +  L            D      ++
Sbjct: 204 NPETNDKFSWFDYRSKGFNDNRGLRIDLILATKPLHAKLHDAGI-------DYELRGIEK 256

Query: 292 LSDHCPISIDY 302
            SDH PI  +Y
Sbjct: 257 PSDHAPIWAEY 267


>gi|238028045|ref|YP_002912276.1| exodeoxyribonuclease III xth [Burkholderia glumae BGR1]
 gi|237877239|gb|ACR29572.1| Exodeoxyribonuclease III xth [Burkholderia glumae BGR1]
          Length = 258

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/300 (10%), Positives = 78/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +  +   D++ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLASSQTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  ++  +      ++     F  A  R
Sbjct: 35  LKLPDEKFPKADLEAAGYRSWFTGQKTYNGVAILVRD-TLGVDETDVVKNIPGFEDAQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + ++  +  +     + +  Y        Q    L+ W+  +     
Sbjct: 94  VIAATV-----NGVRIVSAYFPNGQAPGTDKFAYK------MQWLDALQAWLKDELARHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAALLGMGLVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++       L            D      ++ SDH PI  
Sbjct: 203 WWDYRMLGFRRNAGLRIDHILLSPALATTLRACEV-------DREPRGWEQPSDHAPIFA 255


>gi|270262862|ref|ZP_06191133.1| endonuclease/exonuclease/phosphatase [Serratia odorifera 4Rx13]
 gi|270043546|gb|EFA16639.1| endonuclease/exonuclease/phosphatase [Serratia odorifera 4Rx13]
          Length = 298

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 85/287 (29%), Gaps = 51/287 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A K+R+ S+NI                    SD T + +  K ++ D+V LQE+     
Sbjct: 54  QAPKIRIASFNI---------------AAGKVSDMTAIAKAIKAMNVDVVALQEVDKLTG 98

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            +    +       +    +   +    +     +A   K      + YPL   +     
Sbjct: 99  RSGKLDQAEELAKLTGM-HVAFGRAIDFDGGEYGLAFLSKYPLHDSKIYPLPSGQR---- 153

Query: 140 AGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              R A     ++      I +++ HL                 ++   Q + L D   +
Sbjct: 154 -EQRIAFSAQTDVPEFPAPITLINTHL-----------DTKEDPAMRLDQVRELNDRTIE 201

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            +      ++ GD N            W  +    + I          +          I
Sbjct: 202 IRGIK---LLFGDMNDVPGS-----VTWTELSRYWNDIMPT-----TQDGRSWPAENAEI 248

Query: 258 --DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             DY     NA ++   +S +    + D        +SDH P+  + 
Sbjct: 249 KVDYIF-SGNAQRW-HLDSLTVPNASGDWNGIHWPAVSDHLPVVAEL 293


>gi|254518532|ref|ZP_05130588.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA]
 gi|226912281|gb|EEH97482.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA]
          Length = 265

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 89/291 (30%), Gaps = 46/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+ T    +          R      ++     N D DI+ +QE+ +       
Sbjct: 1   MKVMTFNLRTDFLLD-------INNRWNKRKEIVYDILNNNDCDIIGVQELNNKMFKDIS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD-----SFS 138
                + I  S   L               I V KK+  +   ++ L    +      + 
Sbjct: 54  KEAPGYNIIGSPRSLK-------YFIERNDILVSKKHKILEYSTFWLSEDPEKIGSAIWY 106

Query: 139 RAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT- 196
               R     L+ +N   I  V + HL                        + + +++  
Sbjct: 107 SVYPRICTTALIRLNDGNIVRVYNTHLDFLLS------------KAREYGLKKIGEYMDK 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD----SRCNANKNLR 252
           Q ++   P ++ GDFN         +           +     +K+    S  +  K  +
Sbjct: 155 QHEKDNYPAILMGDFNASPTSKAIKNFSEGKYSSKKFIAVQDHKKEIYNMSTMSKFKGNK 214

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + IDY  + +          F  +     +    GK  SDH P+    D
Sbjct: 215 KGLHIDYIFVTEE---------FKVLDTEILEYNKNGKYPSDHYPMIAKLD 256


>gi|332526767|ref|ZP_08402869.1| extracellular nuclease-like protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332111170|gb|EGJ11202.1| extracellular nuclease-like protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 931

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 94/347 (27%), Gaps = 71/347 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQ----------------------EGVSLWKNSVKRTTSD 53
              +V   V++ S+N+                                   NS+      
Sbjct: 467 APPAVGGNVKVASFNVLNYFTTFTNGATAGGQTGQGCSQGGTVSASNCRGANSLAEFQRQ 526

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNND-I 110
              + +    LDAD+V L E+ +    AV  +       +   T   +      + +D I
Sbjct: 527 RAKIVEALAALDADVVGLMEIQNNGVVAVQNLVDALNLRVGSGTYAALPEPAAGTGSDAI 586

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCF 169
             A+  +   +  +        A +      +R  +       NG++  V+  HLKS   
Sbjct: 587 KVAMIYKPSRLTRVGAPASDTAAVN------SRPPLAQTFAPANGERFTVVVNHLKSKSS 640

Query: 170 LDSLENTYSP-----------SCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKIN 216
             +  +  +P             +L   QA+ L+ ++   Q        ++ GDFN    
Sbjct: 641 CPAAGDADAPGNVDSGDGQGCWNALRVAQAEQLRRFVAQLQAASGSHDVLLVGDFNAYAQ 700

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                                P   D+   +         +D+ +        +      
Sbjct: 701 EDPVFQFTGSGYVDE------PGRFDASGYSYVFDGAAGRLDHAISTATLSPKVSGARHW 754

Query: 277 EILYNEDDIKSRG--------------------KRLSDHCPISIDYD 303
            I  +E                            R SDH P+ +  +
Sbjct: 755 HINADESVAHDYNLEFKQPACAACAPDPYAATPYRSSDHDPVLVGLN 801


>gi|283458671|ref|YP_003363306.1| exonuclease III [Rothia mucilaginosa DY-18]
 gi|283134721|dbj|BAI65486.1| exonuclease III [Rothia mucilaginosa DY-18]
          Length = 291

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/319 (13%), Positives = 87/319 (27%), Gaps = 62/319 (19%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F        +  +R+ S N+N +                      +  +  + D DI+ L
Sbjct: 3   FSNTPAPRPSGLLRVASVNVNGIRAAYKKD---------------MAAWLASRDIDILCL 47

Query: 72  QEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKKNVRVLQQSY 128
           QE+ + +A+  ++  ++ W I ++       +          ++A  V +      + + 
Sbjct: 48  QEVRAPDAIVRELLDESQWHILHAEAAAKGRAGVLVATRRTPNSAGEVLENQPVATRSNI 107

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                 DS         +      NGK + V+  ++ S       ++        +  + 
Sbjct: 108 GEEYFDDSGRWVEADYVL-----PNGKTLTVVSAYVHSGEVGTQKQDDKYRFLERMLVRM 162

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPND 232
             L              +I GD N     L   +                 F +      
Sbjct: 163 PELAK-------HSDHVLIVGDLNVGHTELDIKNWKANQKRAGFLPEERAYFDRFFGDIG 215

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
                 +              +           IDY +      +  +           D
Sbjct: 216 YRDVARELAGQVPGPYTWWSYRGKAFDNDAGWRIDYHMATPALAESAV-------EAVVD 268

Query: 284 DIKSRGKRLSDHCPISIDY 302
              S  +R SDH P+ +DY
Sbjct: 269 RAASYDERFSDHAPLVVDY 287


>gi|37519709|ref|NP_923086.1| exodeoxyribonuclease III [Gloeobacter violaceus PCC 7421]
 gi|35210700|dbj|BAC88081.1| exodeoxyribonuclease III [Gloeobacter violaceus PCC 7421]
          Length = 258

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/302 (9%), Positives = 77/302 (25%), Gaps = 71/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WN+N+++                     +  +      +++ LQE    +     
Sbjct: 4   LTVATWNVNSIN----------------VRLGGVCAWLSAHRPEVLCLQETKVPDE---- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +    +    +  +A+  +    + +        D+      R
Sbjct: 44  ------RFPVAAFEALGYEVAFAGQKAYNGVAIVSRKPVTVVRRGLPGDEADA-----PR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   VE       ++++++ +     S +  Y           + L+ ++    +   
Sbjct: 93  RLIAATVEDT----QIINVYVPNGSEAGSEKFAYK------LLWLERLRQYLLADFDPKA 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANK 249
             ++ GDFN         D                          I   +          
Sbjct: 143 AVLLCGDFNIAPEERDVWDPKAVAGKVLFHPDEHAALERIRTWGFIDAFRLHSPAAGQFS 202

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +         + ID+  +     +              D         SDH P++ 
Sbjct: 203 WWDYRAAAFRRNLGMRIDHIWVSSPLAERCSACWI-------DAQPRAQPSPSDHVPVAA 255

Query: 301 DY 302
            +
Sbjct: 256 SF 257


>gi|237709161|ref|ZP_04539642.1| metallophosphoesterase [Bacteroides sp. 9_1_42FAA]
 gi|229456857|gb|EEO62578.1| metallophosphoesterase [Bacteroides sp. 9_1_42FAA]
          Length = 276

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 81/309 (26%), Gaps = 71/309 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +  L   L   +A     +RL+++NI   +  + V            D+  +    
Sbjct: 30  MKKTLPLLFILLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 78

Query: 62  KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            ++  ++V LQE+ S          + ++  +     +++             +     I
Sbjct: 79  NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 130

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  K + V  ++  L G      R   R  +    +                   +   
Sbjct: 131 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 177

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                           L+           PF +AGD N +                    
Sbjct: 178 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 214

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             F    D   +          IDY    +   K     S   +              SD
Sbjct: 215 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 265

Query: 295 HCPISIDYD 303
           H P+ I  +
Sbjct: 266 HRPLVIVLE 274


>gi|225852859|ref|YP_002733092.1| endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC
           23457]
 gi|256263656|ref|ZP_05466188.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2
           str. 63/9]
 gi|225641224|gb|ACO01138.1| Endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC
           23457]
 gi|263093710|gb|EEZ17715.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2
           str. 63/9]
 gi|326409399|gb|ADZ66464.1| endonuclease/exonuclease/phosphatase [Brucella melitensis M28]
          Length = 369

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 98/366 (26%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S ++N                +  R       +          
Sbjct: 2   FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 62  ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        S+  L   D                 R   R  + + + I G+ +
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213
            +   HLKS     + ++  + S  +   +A+ ++  I +K      +   ++I GDFN 
Sbjct: 182 SLFVAHLKSMSGARNGQDGRASSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +                  
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +DY +                      +       + +           + SDHCP
Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           +S+  +
Sbjct: 362 VSVTLN 367


>gi|323136205|ref|ZP_08071287.1| exodeoxyribonuclease III Xth [Methylocystis sp. ATCC 49242]
 gi|322398279|gb|EFY00799.1| exodeoxyribonuclease III Xth [Methylocystis sp. ATCC 49242]
          Length = 266

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 83/306 (27%), Gaps = 67/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                       L+  + K    D++ LQE    +A    
Sbjct: 1   MKITTWNIN----------------SVRLRMPLVAHFLKTRAPDVLCLQETKCRDAE--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                +    +  +AV  K      +        D+       
Sbjct: 42  FPMKDFHAL------GYRHVAINGQKGYHGVAVVSKKPLRFVEKRDFCEKGDARH----- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + +E     I + + ++ +    D  +   +P  +        +K WI  +  +  
Sbjct: 91  --IAVEIEAKSGPIMLHNFYVPAG--GDEPDVEINPKFAHKLDFLDEMKSWIETEGVTKG 146

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKT--------------IDPNDSLIRFPKEKDSRCNA 247
              + GD N     + + ++    K                     +        +    
Sbjct: 147 RVALVGDLNIAPLEHDVWSHKALLKVVSHTPVEVEKLTDVFRAGRWIDAMRHFVPADEKL 206

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+ ++ +     L          +        +R SDH P
Sbjct: 207 YTWWSYRAADWAASNRGRRLDHILVSEALGGALS-------RLDVLQEARGWERPSDHVP 259

Query: 298 ISIDYD 303
           ++I+  
Sbjct: 260 VTIELS 265


>gi|301091754|ref|XP_002896054.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095616|gb|EEY53668.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 891

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 92/320 (28%), Gaps = 51/320 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V + ++N+  +  +       +  K T +    +         DI  L E   Y A   +
Sbjct: 582 VSVGTYNVWMMPRKVSAFTSCSPKKNTRARL--IGDLLPPC--DIWVLTECFDYRARDIL 637

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHT---AIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             K T   ++     + H + + +N        + +  K   +  +     GA     + 
Sbjct: 638 LDKMTEAGYFFFSPTVGHKRINKSNMRKLLNGGVLLASKYPILSVRVKLFEGACAGADKL 697

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            ++  +   +  +G  + V   HL+++            S ++   Q   + +++     
Sbjct: 698 ADKGVLYCKILKDGLLVHVFSTHLQAW--------NDPLSRTMRKLQMDMIANFMRAMDI 749

Query: 201 S--LVPFVIAGDFNRKINYLG---NNDDFWKTIDPNDS---------------------- 233
                  +  GD N   +        D+     +  D                       
Sbjct: 750 DEVNDVVLFVGDLNVDYHLNKTNQEYDEMLNIFEAKDPSAVHPRKLGNASDSDKKESAAE 809

Query: 234 ------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                     P+      +      +   +DY +  +   +     S+ + L        
Sbjct: 810 FKHLRKYSFDPRVNALAADGLSTDGSLELLDYILYSRTHRQPTTASSWVQPLTTSQPWMW 869

Query: 288 RG---KRLSDHCPISIDYDF 304
           R      LSDH P+  ++ F
Sbjct: 870 RNQPQYNLSDHFPVVSEFTF 889


>gi|260173205|ref|ZP_05759617.1| hypothetical protein BacD2_15145 [Bacteroides sp. D2]
 gi|315921479|ref|ZP_07917719.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695354|gb|EFS32189.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 608

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 81/304 (26%), Gaps = 63/304 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L +   L          +RL+++NI   +  + +            ++  +    
Sbjct: 1   MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDIC-----------NFQRVANVI 49

Query: 62  KNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   D+V +QE+ S    +    V  +                     +     I +  
Sbjct: 50  NNASPDVVAIQEVDSMTRRSGQKYVLGEIAERTQMHACFAPAIK----FDGGKYGIGLLT 105

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K V +  Q+ PL G      R   R  +    E           HL              
Sbjct: 106 KQVPLRLQAIPLPG------REEARILILAEFE----DYIYCCTHLSLTEED-------- 147

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   + + L+   +       P  +AGD N +                 +    F 
Sbjct: 148 --------RMKSLEIVKSFTASYKKPLFLAGDMNAEPESDFIK----------ELQKDFQ 189

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              + + +       K  IDY    ++        S   +              SDH PI
Sbjct: 190 ILSNPKQSTYPAPDPKETIDYITALKSNANGFALISSQVL---------DEPMASDHRPI 240

Query: 299 SIDY 302
            ++ 
Sbjct: 241 LVEL 244


>gi|311113023|ref|YP_003984245.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931]
 gi|310944517|gb|ADP40811.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931]
          Length = 282

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 85/314 (27%), Gaps = 64/314 (20%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
            A+ +R+ S N+N +                 +    +  +    D DI+ LQE+ + + 
Sbjct: 4   AAKTLRVASVNVNGIRA---------------AYRKDMATWLAGRDVDILCLQEVRAPDK 48

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKD 135
            V ++  ++ W I ++       +        H       ++       + +       D
Sbjct: 49  IVRELLNEDDWNILHAEAAAKGRAGVLVATRKHPNANGELLK-NQPVATRSTIGEDYFAD 107

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +         +       G+ + V+  ++ S       ++        +  +   L    
Sbjct: 108 AGRWVEADYTL-----PTGETLTVVSAYVHSGEVGTPRQDDKYRFLDRMLVRLPELAQ-- 160

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPK 239
                     +I GD N     L   +                 F K            K
Sbjct: 161 -----HSDHVLIVGDLNVGHTELDIKNWKANQKRAGFLPEERAYFDKFFGEIGYEDVARK 215

Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                         +           IDY +         ++ +        D   S  +
Sbjct: 216 LAGEVPGPYTWWSYRGKAFDNDAGWRIDYHMATPALAAKAVEATV-------DRAASYDE 268

Query: 291 RLSDHCPISIDYDF 304
           R SDH P+ +DY F
Sbjct: 269 RFSDHAPLVVDYQF 282


>gi|254000148|ref|YP_003052211.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4]
 gi|253986827|gb|ACT51684.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4]
          Length = 250

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 84/287 (29%), Gaps = 48/287 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ ++NI+         L  +            R+  +NL AD+VFLQE+   +    
Sbjct: 4   TLRVATFNIHKGLTSFNARLALHDQ----------REMIRNLQADVVFLQEVQDEHHGNG 53

Query: 83  V------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +          T  +  +      + K       H   AV  +   +   ++ +      
Sbjct: 54  LRFKHWPAAGQTHFLADACGPNYAYGKNAVYPGGHHGNAVLSRFPILQSTTHDISA---- 109

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   + I G    +  I +                     +Q   L+D+I 
Sbjct: 110 -HEIEQRGLLHCEIAIEGWPQTLHCICVHLGLL-----------ARWRFKQFGALRDYIH 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P VIAGDFN      G+     + +D  +    F         +  ++     
Sbjct: 158 AVIPEDAPLVIAGDFNDWRLSAGH-----QVMDGLNMREVFEHAHGKPARSFPSMFPLFR 212

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D   +            F+    +           SDH  +S   +
Sbjct: 213 LDRIYVRG----------FNIHSAHVHGGPRTALT-SDHAALSAVLE 248


>gi|74318453|ref|YP_316193.1| exodeoxyribonuclease III [Thiobacillus denitrificans ATCC 25259]
 gi|74057948|gb|AAZ98388.1| exodeoxyribonuclease III xth [Thiobacillus denitrificans ATCC
           25259]
          Length = 255

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 79/303 (26%), Gaps = 74/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      L  +      D+V LQE    +     
Sbjct: 1   MKIAAWNVNSL----------------KVRLPQLLDFLATRRPDVVCLQETKVPDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    S    +  +A+  +           +           +
Sbjct: 42  -------FPSVELSAAGYRAVFSGQKTYNGVAILSR------SQATDVSVGIPGFGDEQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   VE       V+ ++  +    DS +  Y  +          L  W+ ++     
Sbjct: 89  RVIAATVEGT----RVVCVYCPNGQSPDSDKYFYKLA------WFDALSLWLMEELARHP 138

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              + GDFN        +D                 ++ +     L    +  +    + 
Sbjct: 139 RLAVLGDFNIAPEDRDVHDPKAWEGSVHVSPRERERFQALLQLG-LKDSFRLFEQPEKSF 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++           +        D    + +R SDH P+ 
Sbjct: 198 SWWDYRMMGFRRNHGLRIDHILLTDALAASCTSSTI-------DRDMRKLERPSDHAPVL 250

Query: 300 IDY 302
            + 
Sbjct: 251 AEI 253


>gi|325108266|ref|YP_004269334.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
 gi|324968534|gb|ADY59312.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
          Length = 320

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 90/311 (28%), Gaps = 51/311 (16%)

Query: 22  QKVRLVSWNINT----LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            ++ +  WN+        + +        V           +  ++L+ADI+ L E+ + 
Sbjct: 31  NQITVAFWNVQNLLDEFDDPDLPHDEAFPVNSVRERMGKDAEVIRHLNADILGLAEVENR 90

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + ++        + S E   +    +  +     +A+  +     Q            
Sbjct: 91  ALLNRLVKG-----YLSNEGYKHVVLIEGEDSRGIDVALLSRFPCFAQS---------VD 136

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  +     + G+  +V+  H KS       +   +      + Q +++   + +
Sbjct: 137 IEGLPRDLLACRFSMRGQVFYVVVNHWKSRRDGGGGDVRLNGG---RAMQ-EFVSRTVRE 192

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
            +   VP +  GDFN +       D  +  +     +                  R+   
Sbjct: 193 YEGQAVPVIAMGDFNDEP-----EDASFAPMRQAGMVSTMDSLAQEDRWTLGYYDRDASR 247

Query: 257 -----IDYFVMDQNAYK-----FLIQESFSEILYNEDDIKSRGKRL-------------S 293
                 D   +  N  +     ++  E         D  +  G R+             S
Sbjct: 248 MDLLCFDQIWITPNLQQSPGMRWVRTEVVRPRFMINDRRQFNGVRIPLPIDDYRDRIGYS 307

Query: 294 DHCPISIDYDF 304
           DH P+   + F
Sbjct: 308 DHYPVKATFAF 318


>gi|262404202|ref|ZP_06080757.1| exodeoxyribonuclease III [Vibrio sp. RC586]
 gi|262349234|gb|EEY98372.1| exodeoxyribonuclease III [Vibrio sp. RC586]
          Length = 268

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 82/309 (26%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   V      + G          R
Sbjct: 42  -------FPRQEVEAMGYQVYFHGQKAHYGVAILCKQTPVEV----IKGFPTDSEEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   V+ +G K  +L+       F       +        Q  + L  ++ + + +  
Sbjct: 91  MIMATFVDQDGNKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLGEHRSNAE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++     ++ +++     +  F +   
Sbjct: 146 RLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQSLMDWGLVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +   +          D       + S
Sbjct: 206 EVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAETCQEAGI-------DYELRGIDKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWATF 267


>gi|145594280|ref|YP_001158577.1| exodeoxyribonuclease III Xth [Salinispora tropica CNB-440]
 gi|145303617|gb|ABP54199.1| Exodeoxyribonuclease III [Salinispora tropica CNB-440]
          Length = 265

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 74/302 (24%), Gaps = 71/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    L  +    + D+V LQE    +     
Sbjct: 1   MRLATWNVN----------------SVKARLPRLLDWLAGTNPDVVCLQETKCPDGA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + ++    ++     +A+  +              +  F     R
Sbjct: 42  -------FPVAEVGTLGYTVASHSDGRWNGVAILSRVGLTDVTVG--FPDEPGFPDPEAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   LD     Y  +          L+D +  +     
Sbjct: 93  A-----LSATCAGLRVWSVYVPNGRTLDDPHYAYKLA------WLGALRDTLEVELTGGA 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P  + GDFN         D                    +         P       +  
Sbjct: 142 PLAVCGDFNVAPTDSDVWDPALFTGSTHVTPAERTALAALRDLGLDDVVPTPMKGP-HPF 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID         +              D    +GK  SDH PI 
Sbjct: 201 TYWDYRAGMFHQNKGMRIDLVYASAPFAR-------VVRAAYVDREARKGKGPSDHAPIV 253

Query: 300 ID 301
           +D
Sbjct: 254 VD 255


>gi|258651796|ref|YP_003200952.1| endonuclease/exonuclease/phosphatase [Nakamurella multipartita DSM
           44233]
 gi|258555021|gb|ACV77963.1| Endonuclease/exonuclease/phosphatase [Nakamurella multipartita DSM
           44233]
          Length = 942

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/330 (14%), Positives = 87/330 (26%), Gaps = 48/330 (14%)

Query: 16  CTASVAQKVRLVSWNINTLS---------------EQEGVSLWKNSVKRTTSDYTLLRQY 60
              +V    R+ S N+                    +       ++        T +   
Sbjct: 458 SPPAVGGSTRVASQNVLNYFLTVDDGTTAGRICGPARNQECRGADNADELARQRTKILAA 517

Query: 61  AKNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
              LDAD+V L E+ +   V     +               ++ +     + I   +  R
Sbjct: 518 LGGLDADVVGLLELENTPGVDPAADLVAGLNARPGAQPYASVD-TGVIGGDAIRVGLLYR 576

Query: 118 KKNVRVLQQSYPLLGAKDS-FSRAGNRRAVELLVE-INGKKIWVLDIHLKSF---CFLDS 172
              V+ +     L   KD  F    NR  +    +   G +  V   HLKS    C  D 
Sbjct: 577 PSAVQPVGGFQILDSTKDQAFIDTANRPVLVQTFQTAAGGRFTVAVAHLKSKGSACAGDP 636

Query: 173 LENTYSPSC-SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                  +C    +  A  L  ++            +I GD N   +         +T+ 
Sbjct: 637 DAGDGQGNCNQTRTAAAAALARYLDTDPTGSGDPDRLIVGDLNSYDHEDPI-----RTLR 691

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                 +                    +D+ +   +    +       I  +E D+    
Sbjct: 692 EAGYTDQIAATGGEFAYGYVFDGQAGYLDHALASASLTGQVTAAGEWHINADEPDVLDYD 751

Query: 290 ----------------KRLSDHCPISIDYD 303
                            R SDH P+ +  D
Sbjct: 752 TTFKSPEQDALFEANQFRASDHDPVLVGID 781


>gi|15889021|ref|NP_354702.1| exonuclease III [Agrobacterium tumefaciens str. C58]
 gi|15156812|gb|AAK87487.1| exonuclease III [Agrobacterium tumefaciens str. C58]
          Length = 265

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 89/305 (29%), Gaps = 68/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+   DIV LQE+ S   V + 
Sbjct: 1   MKIATWNING----------------VKARIENLCQWLKDSSPDIVCLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  K               D  +R    
Sbjct: 42  FPRLE-------IEALGYHIETHGQKGFNGVALLSKVKPDEVNRGLPGDDADEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +  + G  I V  ++L +    D                 + L+ +   +     
Sbjct: 92  --IEGVFSVEGGAIRVCSLYLPNGNPPDDPVK-----YPYKLAWMERLRRFAEDRLAMEE 144

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N                   +L      ++ ++ N       +         
Sbjct: 145 PLILAGDYNVIPEPFDCHDPRVWEGDALFLPKTRAAFRKLE-NLGFTDAARATTDAAGLY 203

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L      + +          ++ SDH P+ 
Sbjct: 204 SFWDYQAGAWPKNNGIRIDHLMLSAEAADRLQSVEIEKHV-------RAWEKPSDHVPVC 256

Query: 300 IDYDF 304
             +DF
Sbjct: 257 GYFDF 261


>gi|56479395|ref|YP_160984.1| hypothetical protein ebA6951 [Aromatoleum aromaticum EbN1]
 gi|56315438|emb|CAI10083.1| conserved hypothetical protein,predicted Endonuclease / exonuclease
           / phosphatase family [Aromatoleum aromaticum EbN1]
          Length = 271

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 82/280 (29%), Gaps = 52/280 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +R+ ++NI+     +              D + + +    L+ D + LQE+ +    
Sbjct: 20  SDCLRISTYNIHRCVGADR-----------REDASRVARVIAELNCDTIGLQEVDNQPDR 68

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                +  +    ++   I        ++     A+  +   +  + + L     SF+R 
Sbjct: 69  RHDSMQLDFLAHAASMTAI-PGHTIVRHEGVFGNALLTRRPVLGVRQHDL-----SFNRR 122

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+E+ +++ G+ + V+  HL                 +    Q + +   +     
Sbjct: 123 EPRGALEVDLDVEGEVVRVIVTHLGLRP-------------AERRFQVRKMLKLL-HDLP 168

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                V+ GD N  +            +                  +         +D  
Sbjct: 169 MDQLVVVLGDINEWLPLGRPLRWLHGIL-----------GHAPGERSFPVWLPMFALDRV 217

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +               +L  E       ++ SDH P+  
Sbjct: 218 WVRPR----------HNLLAFETHRSPTSRKASDHLPVKA 247


>gi|304316058|ref|YP_003851203.1| endonuclease/exonuclease/phosphatase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777560|gb|ADL68119.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 232

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 84/278 (30%), Gaps = 56/278 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++++NI+   + +                  +  + K   AD++ LQE+ +Y   +  
Sbjct: 3   LTIMTYNIHGGKDIDDNLTIYG-----------ISNFIKQSKADVIGLQEVDTYLGRSYF 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +                          +  +   V + +Y L            R
Sbjct: 52  LNEIKYLAKRLKMYYAFGPNIKIGLGSF-GNGILSRYPIVKKNNYHLTSTG------ERR 104

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             + +L+E++  +KIW L  HL                      Q+Q +   I +     
Sbjct: 105 GVLSVLIELDSYRKIWFLTTHLGLNS-------------KERVIQSQEILKIIKRL---D 148

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P ++ GDFN               +             +S   +  +    + IDY + 
Sbjct: 149 YPVILTGDFNETP-ENEAYSIINHVLVDGAF------SANSDYYSYLDGDEPVRIDYIMH 201

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            ++               + + IK+    LSDH P+  
Sbjct: 202 SKDI--------------SVESIKAVDCNLSDHFPVIA 225


>gi|34497748|ref|NP_901963.1| hypothetical protein CV_2293 [Chromobacterium violaceum ATCC 12472]
 gi|34103604|gb|AAQ59965.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 407

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 50/288 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + + + ++NI+             S          + +    L  D++FLQE+   N + 
Sbjct: 159 KSISICTYNIH----------KGMSPLNRHVKVGGMAEALAELAPDMLFLQEVQGKN-LE 207

Query: 82  KVFPKNTWCIFYSTERLIN-------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +      W +      L         +    S    H   A+  +               
Sbjct: 208 RALRHQIWPVQPQHHYLAGRLAHRAVYGLNASYGHGHHGNALLTRFPV-----NDWCNRD 262

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S +R  +R  ++ L++ +G    V+ +                       +Q + L D+
Sbjct: 263 ISVNRFESRGVLQCLLQPDGWPQPVVALCGHFNLLAFD-----------RRKQYRGLADY 311

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + Q     +P ++AGDFN             + +   ++ +           +       
Sbjct: 312 VRQAIADHLPLILAGDFNDWRGEAS--ALLRQELGLEEAFLTLHGRHAQ---SFPARMPM 366

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +       L  ES   +             LSDH P+  + 
Sbjct: 367 LALDRIYVRG-----LKVESARVLS------GRPWSGLSDHLPLCAEI 403


>gi|89093141|ref|ZP_01166091.1| Exonuclease III [Oceanospirillum sp. MED92]
 gi|89082437|gb|EAR61659.1| Exonuclease III [Oceanospirillum sp. MED92]
          Length = 271

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 77/312 (24%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+ +N+N L                 S    L+        D++ LQE        + 
Sbjct: 1   MKLICFNVNGL----------------RSRLHQLQAVIDKYQPDVIGLQE---TKVHDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP        +    + +         H  + +  K      Q   L   +D    A  R
Sbjct: 42  FP-------LTDVEAMGYHVEIHGQKGHYGVCLISKKPLTNVQKGYLTDEED----AQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      +G  + V++       F       +        +    L+  + +   +  
Sbjct: 91  MIMGDYETDSGNTVRVMN-----GYFPQGESVDHEVKFPAKRKFYADLQAHLEEHCSADQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++     +++  +        F     
Sbjct: 146 NIVVMGDLNISPEDKDIGIGEPNRKRWLKTGKASFQPEEREWYAKLTGWGLTDSFRHLNP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                      +             ID  ++     +              D      ++
Sbjct: 206 DEDQVFSWFDYRSRGFEAEPRRGLRIDGILLTAPLLEKCADAGV-------DYELRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDH PI  + D
Sbjct: 259 PSDHAPIWTELD 270


>gi|310643609|ref|YP_003948367.1| exodeoxyribonuclease iii xth [Paenibacillus polymyxa SC2]
 gi|309248559|gb|ADO58126.1| Exodeoxyribonuclease III Xth [Paenibacillus polymyxa SC2]
          Length = 254

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 79/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +                Y K  DADI  +QE         +
Sbjct: 1   MKLISWNVNGLRACVTKGFYT---------------YLKETDADIFCVQETKLQEGQILM 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S       I               +   +    +       R
Sbjct: 46  ENMEEYAQYWNYAEKKGYSGTAIFTKI---------------KPLSVHYGLEENEEPEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +K ++++++  +     S                Q L        ++  
Sbjct: 91  -----TITLEFEKFYLVNVYTPNTKRDLSRLPYRLEWEDRFRSYLQQL--------DAQK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD N                         D    +     +  F      R +  
Sbjct: 138 PVIICGDLNVAHQEIDLKNAKANYGNAGFTPEERDRMSQLLNAGFIDTFRYFYPDRTDVY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     L+  S    +             SDHCP+ 
Sbjct: 198 SWWSYMPKVRERNIGWRIDYFLVSERLRPLLMDASIDCHIT-----------GSDHCPVI 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|319944727|ref|ZP_08018991.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC
           51599]
 gi|319741976|gb|EFV94399.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC
           51599]
          Length = 253

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 87/290 (30%), Gaps = 56/290 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ ++NI+         +      R       +RQ    L AD+VFLQE+   +     
Sbjct: 6   LRVATYNIH-------KGVVPGPSLRRRPMVKEMRQRLHELQADVVFLQEVQGQNNRFAK 58

Query: 82  KVF--PKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSYPLLGA 133
           +    P +    + + +   +   +            H   A+  +   +  +       
Sbjct: 59  RFAQWPADPQAQYLALDPESSRRFQAVYGLNARYLHGHHGNALLSQFPILSIE-----NR 113

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             S      R  +  ++++  + +    IH   F                 ++QA  L D
Sbjct: 114 DFSDHVFERRGVLHCVLQMGERAVHCFVIHFGLF-------------ARSRARQAGALID 160

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           WI  +     P +IAGDFN         D   + +     +                L  
Sbjct: 161 WIRAEVPPGAPLLIAGDFNDW------QDALSRLLVERLGVYEV----LDSARTFPALMP 210

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + +D   +            F+          S   RLSDH P+  D  
Sbjct: 211 CLRMDRIYVRG----------FAVETAQVLRGLS-WARLSDHAPVVADLT 249


>gi|16125115|ref|NP_419679.1| hypothetical protein CC_0862 [Caulobacter crescentus CB15]
 gi|221233842|ref|YP_002516278.1| hypothetical protein CCNA_00905 [Caulobacter crescentus NA1000]
 gi|13422121|gb|AAK22847.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220963014|gb|ACL94370.1| hypothetical protein CCNA_00905 [Caulobacter crescentus NA1000]
          Length = 305

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 88/311 (28%), Gaps = 48/311 (15%)

Query: 5   YVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
            + A++  L+P T S A +    + ++S+NI   +  +                  + + 
Sbjct: 20  ILAAVLASLLPVTGSQAGEPGRALWVMSYNIRYDNPDDRPDWRTRRGP--------MVEQ 71

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            +    DI+ LQE     A+  +  +    +       +         +  T     ++ 
Sbjct: 72  IRFFAPDILGLQE-----ALPAMVDQLAGDLAGYAHYGVGRDDGARLGETTTIFYRAERF 126

Query: 121 VRVLQQSYPLLGAKDS----FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            RVL ++Y      D+    +  A  R    L+++     +     +             
Sbjct: 127 QRVLARTYWCSPTPDTPSKAYDAALPRTFTRLVLKDRITGVTFDVRNAHLDHVG------ 180

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + S +  + Q   L  W           +  GDFN                 P      
Sbjct: 181 -AESRAKCAAQILALAPW------PKARLITLGDFNSAPEEAP-YRLLTAPEGPYRDARA 232

Query: 237 FPKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                 S      N         PIDY  +D+           +   +      +    +
Sbjct: 233 AASSVFSPSTGTFNRFTPASIGPPIDYIFVDRRL---------NVARFAVPTDVADAGVI 283

Query: 293 SDHCPISIDYD 303
           SDH P+  +  
Sbjct: 284 SDHFPVLAEIT 294


>gi|302879657|ref|YP_003848221.1| Endonuclease/exonuclease/phosphatase [Gallionella capsiferriformans
           ES-2]
 gi|302582446|gb|ADL56457.1| Endonuclease/exonuclease/phosphatase [Gallionella capsiferriformans
           ES-2]
          Length = 249

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 79/288 (27%), Gaps = 51/288 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q + + ++NI+                        LR+    L+ADIVFLQE+   +   
Sbjct: 2   QTLTVATYNIHKGFSHFNG----------RVVMHELRERLHELNADIVFLQEVQGEHTGH 51

Query: 82  KVFPKNTWCIFYST------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                N     +             + K       H   A+  +   V       L    
Sbjct: 52  AGRFANYPDGAHHEFIADRRWPHSAYGKNCVYEAGHHGNAILSRYPIVQT-----LNTDI 106

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S  R  +R  +   + +   +  +  +      F                 Q + L +++
Sbjct: 107 SAHRFESRGLLHCEIALPDGQ-RLHSLCAHFGLF-----------ARGRRAQTRALIEYV 154

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNK 254
             +    V  +IAGDFN         +     I     +    +    R   +       
Sbjct: 155 QHEIPPDVQVIIAGDFNDW------RNQMGAVIASELGMHDVFQLHGGRVARSFPARLPL 208

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +D   M            F+          +  +RLSDH  IS   
Sbjct: 209 FRLDRIYMRG----------FTVAQAEVHAGGA-WQRLSDHAAISATL 245


>gi|193212906|ref|YP_001998859.1| endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB
           8327]
 gi|193086383|gb|ACF11659.1| Endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB
           8327]
          Length = 341

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 82/319 (25%), Gaps = 53/319 (16%)

Query: 26  LVSWNINTLSE-------QEGVSLWKNSVKRTTSDYT----LLRQYAKNLD--------A 66
           ++ WN+  L +        +       S   T          + Q  + ++         
Sbjct: 32  IMWWNVENLFDTKNDKQVDDREFTPGGSRHWTPKKLLLKQLRIAQVFRAIEQQREYERYP 91

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           DIV   E  +                   +  I++ +      I   +A        L+ 
Sbjct: 92  DIVAFAETENRGVFEGTL-----QAIDHAQYKIDYHESPDPRGIDIGLAWN---PATLKF 143

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           +          +  G R  +      +G    V+  H  S  F          + + +  
Sbjct: 144 TGSKPCRVTLDNGRGTRYVIVAGFMASGHPFSVVLNHWPSRSFDAKWSEPKRIAAAKV-- 201

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND------SLIRFPKE 240
            A+ + D +T +       ++ GDFN   N          + D  +       L+     
Sbjct: 202 -ARHIVDSLTTRNPMAE-IIVMGDFNDHPNDRSIRTVLGSSFDRKEVTSSANRLLYNCWN 259

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEIL------------YNEDD 284
                      +    ID  ++           +  +SF                Y+   
Sbjct: 260 DTKSPGTYYYRKQWERIDQILVSPALLDNSKLSIDTKSFRVFSIPEMFSHPGKTLYSTYQ 319

Query: 285 IKSRGKRLSDHCPISIDYD 303
                   SDH P+ +  D
Sbjct: 320 RGKFKGGYSDHLPLLLKID 338


>gi|146343957|ref|YP_001201813.1| putative exported DNAse, extended at the C-terminus relative to
           other homologues [Pseudomonas fluorescens SBW25]
 gi|146187769|emb|CAM96097.1| putative exported DNAse, extended at the C-terminus relative to
           other homologues [Pseudomonas fluorescens SBW25]
          Length = 376

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 88/309 (28%), Gaps = 44/309 (14%)

Query: 1   MIRKYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           M +  +++ +  L    +  +VA   R+ +WN   L   +               Y  L 
Sbjct: 1   MKKTLLMSALLVLATAISGVAVAADARVGTWNTMRLGNGD------------QKSYPALA 48

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                 + D++ +QE+ +   +  +              L +      +         R 
Sbjct: 49  AV--AANVDVLAVQEVMNDEGIQYLKLALEQRTREKWSSLCSSPVGSRSYKEQYCFLSRD 106

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENT 176
             V+    +   L  K  F     R       +   +G    +  +H+            
Sbjct: 107 SAVQYEDGAVSFLDRKHVFM----REPYSARFKSLSDGNTFALATVHIIYG--------- 153

Query: 177 YSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
              S +  + + + L ++    ++     P ++ GDFN   +         + I      
Sbjct: 154 --KSAADRTPELKELGNYWEWLEQVYPGEPIMLMGDFNMPPSDPAFESLRARAI------ 205

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-S 293
                   +   +N + R     D    +Q+A   +                  G+R  S
Sbjct: 206 PMVTDG--ASTLSNTSGRFANLYDNVFANQSARSMMSGVGIVNYPAMLKVSHEDGRRAVS 263

Query: 294 DHCPISIDY 302
           DH P+    
Sbjct: 264 DHAPVFFQL 272


>gi|301104252|ref|XP_002901211.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101145|gb|EEY59197.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 374

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 86/314 (27%), Gaps = 35/314 (11%)

Query: 19  SVAQKVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVF 70
           +   ++++ ++N   L              +   +T +D       +    K LDADI+ 
Sbjct: 65  TSTSQLKVTTFNTEFLFLGNAPHGLKCPGADCRWKTVADAQSHVIQIASVIKKLDADIIQ 124

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           L E+     +  V  +    +  ST +       D++   ++A+  R     V  Q    
Sbjct: 125 LNEVEDCTVLQAVIAQL-QALGDSTYKPYVVRGADTSTGQNSALLTRID-PVVDVQRTET 182

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWV------LDIHLKSFCFLDSLENTYSPSCSLL 184
                         +     +   K  +           L              P C   
Sbjct: 183 RATIPVSGSKCPSSSGYSSSKGVTKHFYTTFNVTGFSKPLTLVGAHLLANPESKPRCFER 242

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNR------KINYLGNNDDFWKTIDPNDSLIRFP 238
             QA  L        +     +I GD N         N           +  ++ +    
Sbjct: 243 EAQATVLAGLANAAVDEGHHAIITGDLNDWSATVLDKNSNTPISAVLSILTGSNFVDVAS 302

Query: 239 KEKDSRCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           K   S                      +D+ ++ ++    L   SF+  LY         
Sbjct: 303 KISQSDRYTQWWDEDNNCVFEDSEVSSLDHMLVSKSLSSALKSVSFNHDLYASSCSGYN- 361

Query: 290 KRLSDHCPISIDYD 303
              SDH PIS+  +
Sbjct: 362 ---SDHYPISVVLN 372


>gi|154507728|ref|ZP_02043370.1| hypothetical protein ACTODO_00210 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797362|gb|EDN79782.1| hypothetical protein ACTODO_00210 [Actinomyces odontolyticus ATCC
           17982]
          Length = 275

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 81/306 (26%), Gaps = 58/306 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + + N+N +                 +       + +  D D++ +QE+ +   +++
Sbjct: 2   TLTVTTVNLNGIRA---------------AHKRGFLDWLEASDTDVLLMQEVRAPEEISR 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 W   +   R+   +           +AVR+    +  +   +L   ++   +G 
Sbjct: 47  EIMGEAWESVWVPCRIKGRAGI--------GVAVRRGRAVLEGEPRLILDEAETDVDSGR 98

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                +  E     + V+  +  S       +         +  +   L   I ++    
Sbjct: 99  WLEAVVRPEGGDTPVRVVSAYFHSGEKDTPKQEAKMAHLPRIGARMAEL---IAEEAAGG 155

Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246
           +  ++ GDFN   +     +                 F                      
Sbjct: 156 ISSLVCGDFNVVRSEADIKNWKPNHNKRAGVLDEEIAFLNRWVEEGWRDTVRDLAGDVQG 215

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY        +           +         +R SDH P
Sbjct: 216 PYSWWSWRGQAFVNNAGWRIDYQYATPALGERARS-------FEIGRADEYAERFSDHAP 268

Query: 298 ISIDYD 303
           +S+ Y+
Sbjct: 269 VSVTYE 274


>gi|158521790|ref|YP_001529660.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans
           Hxd3]
 gi|158510616|gb|ABW67583.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans
           Hxd3]
          Length = 261

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 72/290 (24%), Gaps = 40/290 (13%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                +V ++S N+       G   W+N             +  K    D + +QE+  +
Sbjct: 5   PQSTGRVSVMSLNVRFGLADAGEHSWENRKP-------AFVELFKQYRPDFIGMQEVNGF 57

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A         +    S    I              I   K         + L    D  
Sbjct: 58  QAA-------FFAGLLSDYHAIGKRTPAPAGWQDVLIFYHKNWECRDCDRFFLSDTPDIP 110

Query: 138 SRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           SR       R+ V    E  G ++  ++ H      +                 A  L  
Sbjct: 111 SRMPDSRWPRQCVMGTFEKEGLRMVCVNTHFDFDEPVQVKS-------------AAILLA 157

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            + +   + +P +I GDFN       +                F  +     +       
Sbjct: 158 RLEKFSNTALPVLITGDFNAGPGSDCHRAFTHPGRLTRPFFDVFDGDNSGTFHKFTGDAV 217

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ID+ +                        +  G   SDH P+  ++ 
Sbjct: 218 SDRIDWILCRNMGGPREK---------RIITDRFAGIFPSDHFPVYAEFS 258


>gi|283853514|ref|ZP_06370755.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. FW1012B]
 gi|283571095|gb|EFC19114.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. FW1012B]
          Length = 251

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 76/279 (27%), Gaps = 55/279 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N++                    D     +  + L AD+V LQE+     + + 
Sbjct: 9   LRVATYNVHG-----------WKSLGGRRDIGRFVETIRELAADVVALQEVVMPPLIEEE 57

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +           +   +   +        A+  +      + + L            R
Sbjct: 58  CLERAVAGPLGMHAVSGPT--LTRLGTEYGNALLTRFPVEQSRGHDLSVRGC-----EPR 110

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AVE+++ + G ++ V+  HL                      Q + L   +   +   V
Sbjct: 111 GAVEVVLAVPGGRLRVIATHLGLR-------------ARERRIQTEALLALVR--ERQDV 155

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+ GDFN  +          + +                     +    + +D     
Sbjct: 156 PTVLLGDFNEWMPANRTVRAVSREL-----------GATPAPATFPSCFPVLSLDRIWTS 204

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                          L +    +      SDH P+  + 
Sbjct: 205 PGLA-----------LTSLRRHRPAYATCSDHLPLVAEL 232


>gi|254464804|ref|ZP_05078215.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacterales bacterium Y4I]
 gi|206685712|gb|EDZ46194.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacterales bacterium Y4I]
          Length = 331

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 100/328 (30%), Gaps = 49/328 (14%)

Query: 24  VRLVSWNINTLS----EQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMG 75
           +RL ++NI   +    + + + L          D       +    + LDAD V + E  
Sbjct: 1   MRLATYNIEWFAYLFDKNDRLVLDGKPSGVYGVDRYTQGRAIAHVLRRLDADAVMVIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126
           +     +           +        S   ++     A+    + +             
Sbjct: 61  NTGRTQRTTRALEAFAAEAGLRACEAVSGFPNDTHQEIALLYDPEVLAAEHDARASAAAP 120

Query: 127 ------SYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179
                    L       + A ++  +EL V    G ++ ++  HLKS     +       
Sbjct: 121 QFDGLFEIDLDVDDHLDTVAFSKPPLELAVTTRGGTRLRMIGAHLKSKAPHGASAPEEIT 180

Query: 180 SC-----SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226
           +           QA+WL   +     +    ++ GD N      G   DF +        
Sbjct: 181 ALTIANQRKQLAQARWLHLRVADHVAAGEHVIVLGDLNDGPGADGYEKDFGQSSIEIVLG 240

Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY----KFLIQESF 275
               DP+   +  P+       +              +DY ++  +      ++ I   F
Sbjct: 241 DLLNDPHAQSLLQPRATSLPSTSRFYNPDTKRYFPALLDYVMISHSLMRFDPQWRIWHPF 300

Query: 276 SE-ILYNEDDIKSRGKRLSDHCPISIDY 302
            +   Y +++++      SDH P+++D 
Sbjct: 301 EDAECYADEELREALLNASDHFPVTLDI 328


>gi|182626212|ref|ZP_02953970.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens D str. JGS1721]
 gi|177908476|gb|EDT71009.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens D str. JGS1721]
          Length = 262

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 93/285 (32%), Gaps = 33/285 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+    + +  + W       +     + +  K+   DI+  QE   +      
Sbjct: 4   LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +             + ++   +     V + N   L +  P +     F+ +  R
Sbjct: 57  DLLDEYSWVGEDLEGNGKDEFNAIFFLKNKFEVLEWNQFWLSK-TPNIKGSKDFNSSLPR 115

Query: 144 RAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +L +  +I+G KI + + HL         E        ++ ++ +         +  
Sbjct: 116 ICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------KNYEIY 164

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRNKIP-ID 258
             P++I GDFN  +     N    +  +     + +   K                  ID
Sbjct: 165 KTPYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGYDGRIID 224

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y +  +          +     N D+ K  G   SDH P+  + +
Sbjct: 225 YILYSKE---------YEIKSLNIDNRKINGGYPSDHYPVICELE 260


>gi|323528578|ref|YP_004230730.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
 gi|323385580|gb|ADX57670.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
          Length = 302

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 82/313 (26%), Gaps = 58/313 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RLV WNI      +G             D   + + A+ L D DI+ +QE+        
Sbjct: 1   MRLVDWNIQWGRGVDG-----------RVDLARIVREARALVDFDIMCMQEVTRGFHEPA 49

Query: 75  --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                    S +  A++                               A+  +       
Sbjct: 50  SAGGLAGGPSADQFAELGALLPGMTVIDAIGSDLPPVGAGTRRRQFGNAIVTRLPVRQVL 109

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            + L    D    +  R A+E ++E +   + V+  HL+ +   ++           L Q
Sbjct: 110 RHSLPWPADPAKPSMLRVALEAVIETDVGPLRVISTHLEFYS--ETQRLAQVDRLRALHQ 167

Query: 187 QAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           +A          ++   PF         ++ GDFN                        +
Sbjct: 168 EACEHARRPAHAEKQDSPFADTGRPMSAIVCGDFNSAFGSAAYRKMLKAVPGAPAFADAW 227

Query: 238 PKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                    A                  D+  + ++    +                   
Sbjct: 228 ACAHADSPRAATVGLYDHEQWADGPFACDFIFVTEDLAPRVASCEV-----------DPH 276

Query: 290 KRLSDHCPISIDY 302
            R SDH P+ ++ 
Sbjct: 277 SRSSDHQPMWLEL 289


>gi|190893918|ref|YP_001980460.1| phosphatase [Rhizobium etli CIAT 652]
 gi|190699197|gb|ACE93282.1| putative phosphatase protein [Rhizobium etli CIAT 652]
          Length = 288

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 78/315 (24%), Gaps = 65/315 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +   S+NI      +G             D   + +      AD++ LQE+         
Sbjct: 1   MNFASYNIQYGFGLDG-----------RYDLPRIARSL--EGADVIALQEVTRGFSRNGF 47

Query: 75  -GSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                 +A +FP   W          E                   V  +      ++  
Sbjct: 48  ADMVADIAALFPDYFWVYGPACDLHVEAPEGGLSPVRGIRFQFGNMVLSRWPIASTRTLL 107

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L  ++        R A E ++   G  I V  +HL                   L+ Q  
Sbjct: 108 LPRSRTLGKINPQRGATEAVINAPGGAIRVYSVHLDHVSPD-----ERIRQLQFLNAQIN 162

Query: 190 WL----------KDWITQKKESLVPFVIAGDFNRKINYLGN-------NDDFWKTIDPND 232
                        ++   +      +VI GDFN +                + +      
Sbjct: 163 AFVQEGGSLTGAAEFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAAGGYYGRVARIGT 222

Query: 233 SLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +  F   +  R  +           ++ +DY  +       L                 
Sbjct: 223 PIDAFAALEAYRPESYSWMNPENHGERMHLDYCFVSCGLVSRLQSARI-----------D 271

Query: 288 RGKRLSDHCPISIDY 302
                SDH P+ ++ 
Sbjct: 272 TQSPGSDHFPLWVEI 286


>gi|296414577|ref|XP_002836975.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295632822|emb|CAZ81166.1| unnamed protein product [Tuber melanosporum]
          Length = 290

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 81/296 (27%), Gaps = 20/296 (6%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             T      +RL + NI   +    +    +   R     + +        + ++ LQE+
Sbjct: 4   TNTPPSPLPLRLYTHNIRYATTHP-LPHESSWPTRLPRIISSIAYTQHQHPSTLLCLQEV 62

Query: 75  GSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                ++ +     ++          + +   S     T +    K         P   +
Sbjct: 63  LRTQLLSILSLLPRSYNYIGRARDDGHEAGEYSPVIYDTEVWRLDKWRSKWLSPTPERPS 122

Query: 134 KDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           K  +  A  R           +G+++ VL+ HL      D        S  ++ ++ + +
Sbjct: 123 K-GWDAACIRILTVGYFTHWESGRRVVVLNTHL-----DDQGAVARRESARMIVEEVREV 176

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKN 250
                  +      V+AGD N                +  +      P ++         
Sbjct: 177 L-----GEGEGRGVVLAGDMNSPEGDDAYKIFTASGSLLRDARADVPPAKRYGHQMTFSG 231

Query: 251 LRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             N       ID+    +                  ++        SDH P+ +D 
Sbjct: 232 FGNEHEIPQRIDFVFAAEAKEDDEKAIWTITNYSVLENKFDDEIYSSDHRPVVVDL 287


>gi|254702100|ref|ZP_05163928.1| Endonuclease/exonuclease/phosphatase family protein [Brucella suis
           bv. 5 str. 513]
 gi|261752670|ref|ZP_05996379.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513]
 gi|261742423|gb|EEY30349.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513]
          Length = 369

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 98/366 (26%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S ++N                +  R       +          
Sbjct: 2   FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 62  ALAIAENRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        S+  L   D                 R   R  + + + I G+ +
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213
            +   HLKS     + ++  + S  +   +A+ ++  I +K      +   ++I GDFN 
Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +                  
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +DY +                      +       + +           + SDHCP
Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           +S+  +
Sbjct: 362 VSVTLN 367


>gi|239980898|ref|ZP_04703422.1| hypothetical protein SalbJ_15743 [Streptomyces albus J1074]
 gi|291452759|ref|ZP_06592149.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291355708|gb|EFE82610.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 290

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 100/325 (30%), Gaps = 70/325 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQ---------KVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
           +R++V+ L+  +     + A           +R+ ++NI+  + ++ V            
Sbjct: 7   LRRHVVPLLLAVGLVLTASATAHPATPRPVPLRVATYNIHAGAGEDEVF----------- 55

Query: 53  DYTLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKR 104
           D     +  ++LDAD++ LQE+           +   ++  +    + ++    ++    
Sbjct: 56  DLDRQVRALRSLDADVIGLQEVDVHWGERSQWRDLARELAHRLGMHVAFAPIYSLDPEPA 115

Query: 105 DSN---NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR---RAVELLVEINGKKIW 158
            +          +AV  ++  +  +++ +                  ++  V + G  + 
Sbjct: 116 AAGPTPPRREFGVAVLSRHPVLRVRNHEITRLSTQGENPLPEPGPGFLQATVAVRGIPLD 175

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP-FVIAGDFNRKINY 217
           V   HL            Y P  ++ + Q   +   + +      P  ++ GDFN + + 
Sbjct: 176 VYATHL-----------DYRPDPAVRAAQVADMLRVMDRPCPVRCPAHLLLGDFNARPDA 224

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                           L    ++ D              IDY              + + 
Sbjct: 225 PEL-----------TPLWATLRDADPGAPTFPASAPDRRIDYVATSAGIGLRRAWTAPTG 273

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
           I              SDH P+  D 
Sbjct: 274 I-------------ASDHLPVVADL 285


>gi|62290271|ref|YP_222064.1| hypothetical protein BruAb1_1372 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700193|ref|YP_414767.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis biovar Abortus 2308]
 gi|189024505|ref|YP_001935273.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19]
 gi|237815777|ref|ZP_04594774.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|254689573|ref|ZP_05152827.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 6 str. 870]
 gi|254697714|ref|ZP_05159542.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254730604|ref|ZP_05189182.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 4 str. 292]
 gi|256045007|ref|ZP_05447910.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256257822|ref|ZP_05463358.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 9 str. C68]
 gi|256369791|ref|YP_003107302.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           microti CCM 4915]
 gi|260546815|ref|ZP_05822554.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus NCTC 8038]
 gi|260565390|ref|ZP_05835874.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. 16M]
 gi|260755101|ref|ZP_05867449.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str.
           870]
 gi|260758320|ref|ZP_05870668.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str.
           292]
 gi|260762146|ref|ZP_05874489.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884113|ref|ZP_05895727.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str.
           C68]
 gi|265991436|ref|ZP_06103993.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|297248660|ref|ZP_06932378.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str.
           B3196]
 gi|62196403|gb|AAX74703.1| hypothetical conserved protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616294|emb|CAJ11351.1| Endonuclease/exonuclease/phosphatase family [Brucella melitensis
           biovar Abortus 2308]
 gi|189020077|gb|ACD72799.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19]
 gi|237789075|gb|EEP63286.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|255999954|gb|ACU48353.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           microti CCM 4915]
 gi|260095865|gb|EEW79742.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus NCTC 8038]
 gi|260151458|gb|EEW86552.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. 16M]
 gi|260668638|gb|EEX55578.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str.
           292]
 gi|260672578|gb|EEX59399.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675209|gb|EEX62030.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str.
           870]
 gi|260873641|gb|EEX80710.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str.
           C68]
 gi|263002220|gb|EEZ14795.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|297175829|gb|EFH35176.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str.
           B3196]
          Length = 369

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 98/366 (26%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S ++N                +  R       +          
Sbjct: 2   FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 62  ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        S+  L   D                 R   R  + + + I G+ +
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213
            +   HLKS     + ++  + S  +   +A+ ++  I +K      +   ++I GDFN 
Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +                  
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +DY +                      +       + +           + SDHCP
Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           +S+  +
Sbjct: 362 VSVTLN 367


>gi|183599301|ref|ZP_02960794.1| hypothetical protein PROSTU_02765 [Providencia stuartii ATCC 25827]
 gi|188021535|gb|EDU59575.1| hypothetical protein PROSTU_02765 [Providencia stuartii ATCC 25827]
          Length = 271

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 83/310 (26%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L         +++ LQE        ++
Sbjct: 1   MKFISFNINGL----------------RARPHQLAAIIDKHQPEVIGLQE---TKVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +           + +         H  +A+  KN  V  +        D+      R
Sbjct: 42  FPYD-------DVSKLGYHVFYHGQKAHYGVALLTKNKPVAVRKGFPTDDDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E N   + V++       F       +        +  Q L+D+IT  +    
Sbjct: 90  RIIMADIETNHGLLTVVN-----GYFPQGESREHPVKFPAKEKFYQDLQDYITSTQTPQS 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N     L                          + + +     +  +     
Sbjct: 145 QLLIMGDMNISPTDLDIGIGEANRKRWLKTGKCSFLPEERAWMERLLNWGLVDTYRAMNP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +         +           D      ++ S
Sbjct: 205 DVDDCYSWFDYRSKGFDDNRGLRIDLLLASTALSTRCVATGI-------DYEIRGMEKPS 257

Query: 294 DHCPISIDYD 303
           DH P+  ++D
Sbjct: 258 DHAPVWAEFD 267


>gi|298207487|ref|YP_003715666.1| hypothetical protein CA2559_04510 [Croceibacter atlanticus
           HTCC2559]
 gi|83850123|gb|EAP87991.1| hypothetical protein CA2559_04510 [Croceibacter atlanticus
           HTCC2559]
          Length = 324

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/318 (10%), Positives = 83/318 (26%), Gaps = 51/318 (16%)

Query: 25  RLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAK--------NLD 65
            +  +N+  L +    +   ++             R       + +              
Sbjct: 16  TIAFYNVENLFDHIQDTNILDTDFIPTSDRKWDQNRYEKKLNKIAKVIASIGTSDTHKHP 75

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVL 124
             I+ L E+ +   +  +                N         I TA+  RK  V    
Sbjct: 76  PLIIGLAEVENKKVLKDLVNTEALSSLKYDFVHYNSPDE---RGIDTALLYRKNYVNITQ 132

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            +S+ L        R   R  +++   +  ++I  L  H  S      L      + +  
Sbjct: 133 SKSHELYIETPEGIRDFTRDILQVSCTLLQEQITFLVNHWPSRRDGSGLTEYKRVNAASK 192

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           +   + +   +++ ++    F++ GDFN   +                            
Sbjct: 193 N---KAILRALSK-EQPNQRFIVMGDFNDDPHDNSIKSLI-----EFGLYNPMETLLTKS 243

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDDI 285
               K   +    D  ++  +  K+  +                     +    +     
Sbjct: 244 KGTTKYKGHWNLFDQVIISHSFLKYQKKKLNFKSASIYDPEFLKQRHGKYKGTPHRTFGG 303

Query: 286 KSRGKRLSDHCPISIDYD 303
           ++     SDH P+ +  +
Sbjct: 304 RNYTGGYSDHFPVYVTLE 321


>gi|307725679|ref|YP_003908892.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
 gi|307586204|gb|ADN59601.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
          Length = 258

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 83/284 (29%), Gaps = 56/284 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            +   + +R+V++NI+     +G                 + +    L+AD+V LQE+  
Sbjct: 27  ASHAGEPLRIVTYNIHGAVGTDGKRSG-----------ARIAEVISALNADVVALQEVPL 75

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A +    +    +   T             D     AV         ++  L     S
Sbjct: 76  GGAASIDILRELQDL---TGMHAVPGPTLDGPDRRFGNAVLTNLPVRAIRTLDL-----S 127

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F     R A+++ ++     + ++  HL               S      Q + L   + 
Sbjct: 128 FGSREARGALDVDIDTGNGLMRIVATHLGL-------------SARERRAQVRLL---LE 171

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N    +                  RF +    R   ++       
Sbjct: 172 AFDTPELPVILLGDLNEWFVWGWPMRALL---------TRFGRVAAPRTFPSRFPTF--A 220

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +D   +   A           ++  + D     +  SDH P+  
Sbjct: 221 LDRVWVHPAAR----------LVDIQVDKSRPARIASDHLPLVA 254


>gi|225018561|ref|ZP_03707753.1| hypothetical protein CLOSTMETH_02510 [Clostridium methylpentosum
           DSM 5476]
 gi|224948663|gb|EEG29872.1| hypothetical protein CLOSTMETH_02510 [Clostridium methylpentosum
           DSM 5476]
          Length = 300

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 83/289 (28%), Gaps = 38/289 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++++S+N+           W N           + +  +  DADI+ +QEM       
Sbjct: 34  QTIQIMSFNLRRDPFYTKRFGWGN-------RRDGVIEIIRQSDADIIGVQEMTPEMKKD 86

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + + IF +        +       +  + V   +   L +  P      +     
Sbjct: 87  LETKLDEFSIFGTGRSRKLLGEYSGILVRNETVEVLSNHTFWLSK-NPDKQGSHALLAPF 145

Query: 142 NRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R    +E+ ++ + +++ V + H     +                  AQ +  +I    
Sbjct: 146 PRICTTIEVYLKRSKQRMRVFNTHFDHISWF------------ARKLSAQTILKYIRDYN 193

Query: 200 ESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-- 256
                P ++ GDFN K            + +       F     S    N          
Sbjct: 194 SKDPLPVILTGDFNAKPYSKAIK-MLITSNEYVSLNNIFTAFDISDTYINTYHGFSDRLS 252

Query: 257 ---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              IDY     +         F    +     K  G+  SDH PI    
Sbjct: 253 KYPIDYIFFSND---------FVVNDFQILKNKPNGEYPSDHFPILARL 292


>gi|254694063|ref|ZP_05155891.1| Endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
 gi|261214359|ref|ZP_05928640.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915966|gb|EEX82827.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
          Length = 369

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 97/366 (26%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S ++N                +  R       +          
Sbjct: 2   FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 62  ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        S+  L   D                 R   R  + + + I G+ +
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213
            +   HLKS     + ++    S  +   +A+ ++  I +K      +   ++I GDFN 
Sbjct: 182 SLFVAHLKSMSGARNGQDGRPSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +                  
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +DY +                      +       + +           + SDHCP
Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           +S+  +
Sbjct: 362 VSVTLN 367


>gi|172065587|ref|YP_001816299.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
 gi|171997829|gb|ACB68746.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
          Length = 269

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 87/285 (30%), Gaps = 56/285 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             A   + +R+ ++NI                K  T     + Q    LDAD++ LQE+ 
Sbjct: 21  PAAPGGRDLRIATYNIRG-----------GYGKWHTRAAHRIAQVIHELDADVIALQEVP 69

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    P     +  +T             +     AV  +      ++  L     
Sbjct: 70  LGGTH---APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDL----- 121

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           SF +   R A++  ++ +   I V+  HL               S S  S Q Q L   +
Sbjct: 122 SFHQREPRGALDADIDCSAGMIRVVATHLGL-------------SASERSAQVQRL---L 165

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                  +P ++ GD N         + F +       + RF +    R           
Sbjct: 166 AAFDTGAMPVILMGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTLYPVFS- 215

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +D   +     ++L+  +             R +R SDH P+  
Sbjct: 216 -LDRIWIHPG--EWLVDVNVH--------RSMRARRASDHYPLVA 249


>gi|256393746|ref|YP_003115310.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928]
 gi|256359972|gb|ACU73469.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928]
          Length = 261

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 74/304 (24%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+ +WN+N                  T+    L  +  +   D+V LQE+ + +     
Sbjct: 3   VRVATWNVN----------------SVTARVERLVGWLDSAKPDVVCLQELKTTDEA--- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  +               D    A  R
Sbjct: 44  -------FPAGQLADVGYQAATWGTGRWNGVAILSRLPIADVWRG-WPDLPDFDGVAEPR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   L      Y        +    L   + +     +
Sbjct: 96  A-----LTATCGGVRVTCVYVPNGRELGHPHFDYK------LRWLDSLTASVAEPARGEL 144

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P+ + GDFN                              ++    +   P+         
Sbjct: 145 PYAVLGDFNIAPTDADVWDMSLFAESTHVTPAERAKLADLEAQGLVEVLPRALKYD-KPY 203

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +                   D  + +GK  SDH P+ 
Sbjct: 204 TYWDYRQLAFPKNNGMRIDLVFGNAAFAGA-------VRDAYVDREERKGKGASDHAPVV 256

Query: 300 IDYD 303
           +D D
Sbjct: 257 VDLD 260


>gi|242238792|ref|YP_002986973.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703]
 gi|242130849|gb|ACS85151.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703]
          Length = 287

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/320 (10%), Positives = 84/320 (26%), Gaps = 79/320 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------G 75
           +VS+NI     ++              D   +    +   ADI+ +QE+           
Sbjct: 3   IVSYNIQYGLGRDN-----------RYDLARIADEVR--GADIICMQEVERFWQRSGMVD 49

Query: 76  SYNAVAKVFPKNTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
               +A +  +  W    +      +     R S+           +   +  +++PL  
Sbjct: 50  QPTELAALLKEYYWVYGANLDMDASIAAPDGRVSHRRRQFGTLTLSRWPMLSSRNFPLPK 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                  +  +  +E +++   +   V + HL   C                  Q   L 
Sbjct: 110 FGTLTQHSIQQGVLETVIDTGTRSFRVYNTHLSHLC------------AQTRLPQVAALL 157

Query: 193 DWITQKKESLVPF-----------------------VIAGDFNRKINYLGNNDDFW---- 225
           D   +  E    +                       ++ GD N   +    +        
Sbjct: 158 DIFARSPEEGGAWCGGHPDPAAGWTEGAMPPMPAEMMLMGDLNCLPDSEEYSRLIGPVSP 217

Query: 226 ---KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
              + +     +  +        + + +      ID+ ++       + +          
Sbjct: 218 AHGRLVRHRGLMDAWVAAGQPESSGSTHPNVNGRIDHCLLTPTLGAEVRRCWA------- 270

Query: 283 DDIKSRGKRLSDHCPISIDY 302
                   + SDH P+ ++ 
Sbjct: 271 ----DTDNQGSDHHPLWVEL 286


>gi|188989861|ref|YP_001901871.1| putative exported nuclease [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167731621|emb|CAP49799.1| putative exported nuclease [Xanthomonas campestris pv. campestris]
          Length = 1193

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/340 (12%), Positives = 96/340 (28%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 578 PAPRPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120
              E+ + + +  +  +       + ++   +     + +    I     V+        
Sbjct: 638 GTVEVENISVLQTLAARINADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADVSGGV 697

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVEL---LVEINGK--KIWVLDIHLKSFC 168
            RV   S    G   +++  G        R  + L   + + +G+   +  + +H +S  
Sbjct: 698 PRVEVVSVAQEGKATTWTEPGGAVSLLNDRPPLVLSTRVHQADGRVLPLTTIVVHQRSLN 757

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
             ++ +   +   +    QA +L   +   Q+ +     ++ GDFN      G  D    
Sbjct: 758 GAETDDAAGTRIRAKRQAQASYLARLLQARQQLDPAERVLVMGDFNAFEFNDGYVDAMGT 817

Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + +    +
Sbjct: 818 VTGKPAADAQTVVSGDGIDLVEPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANDALMR 877

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 878 ASNIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917


>gi|221640247|ref|YP_002526509.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides
           KD131]
 gi|221161028|gb|ACM02008.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides
           KD131]
          Length = 339

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/338 (12%), Positives = 97/338 (28%), Gaps = 56/338 (16%)

Query: 21  AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72
           A+ +R+ ++N+   +    +   +        R      +    L      LDAD + + 
Sbjct: 2   ARPLRIATYNVEWFNGLFDDHGRLRPDNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E  + +               + +   + +     ++    IA+     R+     P   
Sbjct: 62  EAPNQSRRRSTVKALE-TFARTFDLRASRAVMGFPSETEQEIALLYDPARIEAHHDPQAS 120

Query: 133 AKDSFSR----------------AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           AK                       ++  +EL +  +G  + V+ +H KS     +    
Sbjct: 121 AKAPRFDDVFRFDIDVDATPEAIRFSKPPLELALRADGHPLRVIGVHAKSKAPHGARNPA 180

Query: 177 Y--SPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------- 224
                +     QQ     WL+  +          ++ GDFN           F       
Sbjct: 181 EAVRIAIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPGLDEYEKLFGRSGIEI 240

Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFL 270
                     +  +P+  +    K      +A           +  +D+ ++  +     
Sbjct: 241 VLGLEEPPELRLHEPHARMALTQKVGIQPSSARFWLAPEQQYFEALLDFIMVSADLAAKS 300

Query: 271 IQESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303
            +            +   +++      SDH P+++D D
Sbjct: 301 PRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDID 338


>gi|78046033|ref|YP_362208.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78034463|emb|CAJ22108.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 1193

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/340 (10%), Positives = 90/340 (26%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 578 PAPVPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNYLHTPDIL 637

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK------- 118
              E+ + + +  +  +       + ++   +     + +    I     V+        
Sbjct: 638 GTVEVENLSVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTAQIAGGV 697

Query: 119 -KNVRV----LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-----KIWVLDIHLKSFC 168
            +   +      ++          S   +R  + L   ++        +  + +H +S  
Sbjct: 698 ARVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQADGRVLPLTAIVVHQRSLN 757

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
             ++ +       +    QA++L   +   Q+       ++ GDFN      G  D    
Sbjct: 758 GAETDDAAGMRIRAKRQAQAEYLARLLQTRQQLNPDEKVLVMGDFNAFEFNDGYVDAVGT 817

Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + +    +
Sbjct: 818 VTGKPAPDAQTVVGGDGTDLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHILANDALMR 877

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S      +               RLSDH P  +
Sbjct: 878 APQIASLSVGHARINADFPGTARNDANTPTRLSDHDPTVV 917


>gi|292899632|ref|YP_003539001.1| exodeoxyribonuclease III [Erwinia amylovora ATCC 49946]
 gi|291199480|emb|CBJ46597.1| exodeoxyribonuclease III [Erwinia amylovora ATCC 49946]
          Length = 268

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 86/310 (27%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L+   +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP        +    + +         H  +A+  K   V  +       +D+      R
Sbjct: 42  FP-------LAEVASLGYHVFYHGQKGHYGVALLCKQQPVAVRRGFASDDEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + V++       F       +        +  + L  ++ Q+++   
Sbjct: 90  RIIMADIMTPSGLLTVIN-----GYFPQGESRDHPTKFPAKEKFYRDLHSYLEQQQKPDN 144

Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                        ++L    ++   +     +  +  +  
Sbjct: 145 QLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFLPEEREWMDKLMNWGLVDTWRAQHA 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID  +  +      +           D      ++ S
Sbjct: 205 TINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADRCVATGI-------DYDIRAMEKPS 257

Query: 294 DHCPISIDYD 303
           DH PI  ++ 
Sbjct: 258 DHAPIWAEFS 267


>gi|311899750|dbj|BAJ32158.1| putative exodeoxyribonuclease III [Kitasatospora setae KM-6054]
          Length = 270

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 76/308 (24%), Gaps = 67/308 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            VR+ +WNIN                  T+    L ++ ++   D++ LQE+        
Sbjct: 2   TVRIATWNIN----------------SVTARLPKLLEWLESAAPDVLCLQELKCATDA-- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                           + +      +     +A+  +                    A  
Sbjct: 44  --------FPAEAVAELGYESAAHGDGRWNGVALLSRIGLADVVRDLPAQPGYRADDADP 95

Query: 143 RRAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             A  +    +      + V  +++ +   +D     Y        +    L+D +    
Sbjct: 96  AEAPVVEPRAIAATCGPVRVWSVYVPNGREVDHAHYRYK------LEWMAALRDAVRDDA 149

Query: 200 ESLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSR 244
               PF + GDFN         D                    +         P+     
Sbjct: 150 AGGRPFAVLGDFNVAPTDEDVYDLAAFAGLTHVTAPERATLAALRELGLRDVVPRPLKYD 209

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +         + ID    ++                  D    +GK  SDH
Sbjct: 210 -RPYTFWDYRALAFPKNRGMRIDLTYANEPFADA-------VTDTYVDREARKGKGTSDH 261

Query: 296 CPISIDYD 303
            P+ +D D
Sbjct: 262 APVVVDLD 269


>gi|241206881|ref|YP_002977977.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860771|gb|ACS58438.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 288

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 82/322 (25%), Gaps = 79/322 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +   S+NI      +G             D   + +      AD++ LQE+         
Sbjct: 1   MNFASYNIQYGFGLDG-----------RYDLARIARSL--EGADVIALQEVTRGFSRNGF 47

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYP 129
               A    F  + + ++     +   +       +          V  +   V  ++  
Sbjct: 48  ADMAADVAAFFPDYFWVYGPACDMHVEADEGGFQPVRGTRFQFGNMVLSRWPVVSTRTLL 107

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L  ++        R A E +++  G  I V  +HL                     +Q +
Sbjct: 108 LPRSRTIGKINLQRGATEAVIDAPGAAIRVYSVHLDHVSAD------------ERIRQLE 155

Query: 190 WLKDWITQKKESL-----------------VPFVIAGDFNRKINYLGN-------NDDFW 225
           +L   I    +                     +VI GDFN +                + 
Sbjct: 156 FLNAHINAFVQEGGSLTGGGEFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAGGGYYG 215

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
           +       +  F   +     +           ++ +DY  +       L          
Sbjct: 216 RVARIGTPVDAFAALEAYSPESYSWMDPEDHGKRMHLDYCFVSCGLQSRLKSARI----- 270

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+ ++ 
Sbjct: 271 ------DTQSVASDHFPLWVEI 286


>gi|107101992|ref|ZP_01365910.1| hypothetical protein PaerPA_01003039 [Pseudomonas aeruginosa PACS2]
          Length = 270

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 80/312 (25%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 +    L    +    D++ LQE          
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIERHQPDVIGLQE---TKVADDQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +    + +         H  +A+  +   +          ++S      R
Sbjct: 42  FPQ-------AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHRGFPSDGEES-----QR 89

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R +     +  G  I V++       F       +        +    L+  +    +  
Sbjct: 90  RFIWGTFSDAQGNPITVMN-----GYFPQGENREHPTKFPAKQRFYADLQSLLENSFKPE 144

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
              V+ GD N                        ++L    ++  T+     +  F    
Sbjct: 145 QALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALN 204

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID  +  +                  D      +
Sbjct: 205 PEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVLQSRFKDAGI-------DYDLRSME 257

Query: 291 RLSDHCPISIDY 302
           + SDH PI ++ 
Sbjct: 258 KPSDHAPIWLEL 269


>gi|171915527|ref|ZP_02930997.1| probable secreted protein [Verrucomicrobium spinosum DSM 4136]
          Length = 275

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 75/284 (26%), Gaps = 50/284 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             V  ++ +VS+N+     +           R              L  D+V LQE+   
Sbjct: 27  EPVKAELDIVSFNLRNGGRRFDGQYDHALQHR----------VIGALKPDLVALQEVDRR 76

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +  +           +      +    S        A   +      ++  L       
Sbjct: 77  TSRVQGLDVPA-DFAKAQGMTFAYGAAMSFAGGEYGTAALSRLPIASSRTIALPVKGG-- 133

Query: 138 SRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                R A  + V +      ++ ++ +H  S     +                      
Sbjct: 134 ---EPRAATLITVAVPTVSPAEVTLVSVHFDSGADDAARRENARV--------------L 176

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I   KE+  P ++AGDFN +            T+             +   ++      +
Sbjct: 177 IAALKETTTPVILAGDFNDRPGS--------TTLTLLAEAGFRRCVPEGDASSYPADEPR 228

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           + ID+ ++   A   L       +              SDH P+
Sbjct: 229 LVIDHVLLRDGADVRLEDAGTKVVP---------NAEASDHRPL 263


>gi|99080738|ref|YP_612892.1| exodeoxyribonuclease III [Ruegeria sp. TM1040]
 gi|99037018|gb|ABF63630.1| Exodeoxyribonuclease III [Ruegeria sp. TM1040]
          Length = 268

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 83/308 (26%), Gaps = 69/308 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ S+NIN                   +    L  +      D+  LQE+         
Sbjct: 1   MKIASFNING----------------IKARVNALTDWLDEAQPDVAVLQEIKSVDEAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F +  + +                      +A+  K      +        D  +R  
Sbjct: 45  ELFEERGYNV------------ETHGQKSFNGVAILSKLPLEDVRRGLPGDESDEQARW- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +E  V +  + + +  ++L +       D          +      + LK    + 
Sbjct: 92  ----IEATV-VGKQALRICGLYLPNGNPVELNDDGTPVEGGKYAYKLGWMERLKARAAEL 146

Query: 199 KESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243
               +P ++AGD+N                   +   +   ++ I        F      
Sbjct: 147 MAEEMPALMAGDYNIIPQAEDAKRPEAWREDALHRPESRAAFQRIVNLGFTEAFRTRTRG 206

Query: 244 RCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             +                  ID+F++   A   L            D      ++ SDH
Sbjct: 207 PGHYTFWDYQAGAWNRDDGIRIDHFLLTPQAADLLRDCQI-------DKDIRGREKPSDH 259

Query: 296 CPISIDYD 303
            PI +D D
Sbjct: 260 VPIWVDLD 267


>gi|330873531|gb|EGH07680.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 380

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 96/342 (28%), Gaps = 75/342 (21%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C+ +V        Q +++++WNI  L+                  + + +    +
Sbjct: 52  LLAASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   +A ++P +T   ++  E + 
Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157
           +     S          R       +   P+  A     +   + A+ +      +G K+
Sbjct: 172 SPHIWGS-VGRKLTTLSRFHIDSAERLQLPVPDANIISRQFQPKNALLVSYLPLRDGGKL 230

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-- 215
            V++ HL +    D              +Q    +  + + +    P++I GDFN     
Sbjct: 231 AVINTHLATAKPGDG----------TAQKQIAATETLLDKLEGGGTPWLIGGDFNLLPLG 280

Query: 216 -------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-----------RNKIPI 257
                      +     +     +     P   +S                        +
Sbjct: 281 QYQRLPEQQRISYAADSELHTLWEKYPMIPNNTESSGTDRSQWLTHFPNDSRVNGPDRTV 340

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           DY     +  +     S           +     +SDH P+ 
Sbjct: 341 DYLFYSPSLKR----VSARV-------RRDDTLLISDHLPVI 371


>gi|308070428|ref|YP_003872033.1| exodeoxyribonuclease [Paenibacillus polymyxa E681]
 gi|305859707|gb|ADM71495.1| Exodeoxyribonuclease [Paenibacillus polymyxa E681]
          Length = 254

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 76/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +                Y K  +ADI  +QE         +
Sbjct: 1   MKLISWNVNGLRACVTKGFYT---------------YLKETNADIFCVQETKLQEGQILM 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S       I               +   +    +       R
Sbjct: 46  ENMEEYTQYWNYAEKKGYSGTAIFTKI---------------KPLSVHYGLEENEEPEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++++++  +     S                Q L            
Sbjct: 91  -----TITLEFENFYLVNVYTPNTKRDLSRLPYRLEWEDRFRSYLQQLDAL--------K 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +     +  F      R +  
Sbjct: 138 PVIVCGDLNVAHQEIDLKNAKANYGNAGFTPEERERMSLLLDAGFIDTFRTFYPDRTDVY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     L+  S    +             SDHCP+ 
Sbjct: 198 SWWSYMPKVRERNIGWRIDYFLVSERLRPLLMDASIDCHIT-----------GSDHCPVI 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|294055186|ref|YP_003548844.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614519|gb|ADE54674.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 261

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 87/291 (29%), Gaps = 43/291 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +R ++ NI        +    +       +   + +  +    D+V +QE+   +  
Sbjct: 3   GRALRFLTLNIAHGRG-LSLYQGLHRASTIERNLQRIVRLLEREQPDVVAMQEVDGSSHW 61

Query: 81  AK---VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            K   +         Y+   L  H++R     +    A+  +       +     A+   
Sbjct: 62  NKHINLLEFLAREAGYAYHHLGVHNRRLGKLPLAYGNALLSRYPIENPDTQAFGSAE--- 118

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-- 195
              G +  +   + +    + V+++HL               S      Q + L  ++  
Sbjct: 119 --LGEKGFLYSELRLPAGHLPVVNLHLDF------------RSRQRRLDQVERLIGYLEA 164

Query: 196 TQKKESLVPF---VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             +++    +   +I GDFN   +      D  K +          +   S      ++ 
Sbjct: 165 RHREKGGETYFSPIICGDFN---SSATKQRDAVKHLIGYLEGHCAYQLLPSGGKTFPSIL 221

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +D+  +  +                    +     +SDH P+  D +
Sbjct: 222 PMQSLDFIFVPPSHEVR--------------RCEVLKSYVSDHRPVVADLE 258


>gi|85059341|ref|YP_455043.1| exonuclease III [Sodalis glossinidius str. 'morsitans']
 gi|84779861|dbj|BAE74638.1| exodeoxyribonuclease III [Sodalis glossinidius str. 'morsitans']
          Length = 268

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 75/309 (24%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L      L  D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIITTLQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +         H  +A+  +   +  +         +      R
Sbjct: 42  FP-------LEEVSRHGYHVYYHGQKGHYGVALLSREKPLAIRR-----GFSTDGAEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +          + V++       F       +        +  + L+ ++ Q      
Sbjct: 90  RIIMADFLTPKGALTVVN-----GYFPQGENRDHPLKFPAKERFYRDLQGYVEQSHHGES 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N     L                          + + +     +  + +   
Sbjct: 145 LLLIMGDMNISPTDLDIGIGEESRKRWLRTGKCSFLPEERAWMERLLSWGLVDTYRQANP 204

Query: 243 SRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID  +  +     +            D       + S
Sbjct: 205 TDDSRYSWFDYRSRGFDENRGLRIDLLLASKPLAAVVRAAGI-------DYTIRAMDKPS 257

Query: 294 DHCPISIDY 302
           DH P+  D+
Sbjct: 258 DHAPVWADF 266


>gi|315022344|gb|EFT35372.1| hypothetical protein RAYM_06065 [Riemerella anatipestifer RA-YM]
 gi|325336528|gb|ADZ12802.1| non-specific nuclease [Riemerella anatipestifer RA-GD]
          Length = 308

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/302 (9%), Positives = 85/302 (28%), Gaps = 30/302 (9%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD------ADIVFLQEMGSYNA 79
           +  +N+          L      +  +         + ++        +V L E+G+   
Sbjct: 8   VAFYNVENFFPPHTPYLPHWDNYKYHNKLHKTAHIFELINQYHNTLPILVGLAEIGNKTV 67

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +  +  K  +   Y      +  +R  +  + +    +  K+   ++  + +   +    
Sbjct: 68  LEDLLAKPVFGGNYHYLHYESPDERGIDVALLYDKNKITVKHSEPIRFKFEMKNEQGELY 127

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  +  ++E NG+      +HL S    D      +     ++   + +       
Sbjct: 128 EDTTRDVLHSVLEYNGETFHCFVMHLPSKREQDINLPKRNEILENINALIENI------I 181

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            +     ++ GDFN   N        +           F         +  + +  +  D
Sbjct: 182 IKDKEAVLVLGDFNENPNEDNLIQFTYHEGILELLHNPFSALYYLGNYSTYHKKEGLLFD 241

Query: 259 YFVMDQNAYKFL-----------------IQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +  ++ ++                     +      +            SDH P+ ++
Sbjct: 242 QIMFSRDFFQTSFGLTYKKAEVFNPTEIKNWDKMKNRPFRTYSGTRYLGGYSDHFPVLVE 301

Query: 302 YD 303
           ++
Sbjct: 302 FE 303


>gi|254500351|ref|ZP_05112502.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11]
 gi|222436422|gb|EEE43101.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11]
          Length = 269

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 82/311 (26%), Gaps = 72/311 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78
             +++LV+WNIN                       ++ Q  + +  D++ LQE      N
Sbjct: 2   TNRLKLVTWNIN----------------SVRLRMPIVEQLIEEVAPDVICLQETKCPDAN 45

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              K F    +                +    +  +A   K      +        DS  
Sbjct: 46  FPEKAFRTAGYEHMA-----------INGQKGYHGVATVSKLPLTNVEKRDFCNVGDSRH 94

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  V + V  NG  + V + ++ +    D  +   +            +++W+   
Sbjct: 95  -------VAVDVPFNGSALRVHNFYVPAG--GDEPDRDKNDKFGHKLDFLGEMQEWLQGA 145

Query: 199 KESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           + +  P V+ GD N                   +     + F    +    L    +   
Sbjct: 146 ETAK-PAVLVGDLNVAPYEHDVWSHKKLLKVVSHTPIETELFETVRETGGWLDAMRQFTP 204

Query: 243 SRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                      +            +D+  + +         S               ++ 
Sbjct: 205 MEEKLYTWWSYRAKDWSAADKGRRLDHVWVSE-------PASNHIKSTEVLRDARGWEKP 257

Query: 293 SDHCPISIDYD 303
           SDH P+   ++
Sbjct: 258 SDHAPVVAVFE 268


>gi|170734592|ref|YP_001773706.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
 gi|169820630|gb|ACA95211.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
          Length = 258

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 83/288 (28%), Gaps = 56/288 (19%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +V   A   + +R+ ++NI+                        +      LDAD++ LQ
Sbjct: 13  VVTAAAPGGRDLRIATYNIHG-----------GYGAWPARAVDRIAAVIDELDADVIALQ 61

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+          P     +  +T             +     AV  +      ++  L  
Sbjct: 62  EVPLGGTR---APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDL-- 116

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              SF     R A++  ++ +   I V+  HL               S S  S Q Q L 
Sbjct: 117 ---SFHPREPRGALDADIDCSTGPIRVVATHLGL-------------SASERSAQVQRL- 159

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             +       +P ++ GD N         + F +       + RF +    R        
Sbjct: 160 --LAAFDTGAMPVILLGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTVCPV 208

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +D   +               ++       +R +  SDH P+  
Sbjct: 209 FS--LDRIWIHPG----------ELLVDVVVHRSARARHASDHYPLVA 244


>gi|319783180|ref|YP_004142656.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169068|gb|ADV12606.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 264

 Score = 93.8 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 84/302 (27%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN                   +    L  +      DIV LQE+ + +     
Sbjct: 1   MKIVTWNING----------------VRARIGNLTHWLTESAPDIVCLQEIKTVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + ++           +A+  K               D  +R    
Sbjct: 41  ------QFPRAEIEALGYNVETHGQKGFNGVALLSKLRFDEVIRGLPGDDADEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   +   + V  ++L +   +D                   L+ W  ++     
Sbjct: 92  --IEGVFSTDKGALRVASLYLPNGNPIDDE-----KKFPYKLSWMARLERWAEERLRLEE 144

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANK 249
             V+AGD+N      +     +     +    +   F +  +              +   
Sbjct: 145 ALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQAFRRLLNLGFTEAVRAVTDARDTYT 204

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A       S  + +          ++ SDH P++I
Sbjct: 205 FWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIEKHV-------RAWEKPSDHVPVAI 257

Query: 301 DY 302
           D 
Sbjct: 258 DL 259


>gi|309812434|ref|ZP_07706189.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus
           sp. Ellin185]
 gi|308433739|gb|EFP57616.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus
           sp. Ellin185]
          Length = 800

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 79/321 (24%), Gaps = 63/321 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGSYNAVA-- 81
           + ++N+  L+  +             + Y  L           D++ L+E+   N     
Sbjct: 484 VATFNVENLAPSDP-----------QTKYDRLAGQITGNLHSPDVLALEEIQDNNGAQND 532

Query: 82  ----------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN----- 120
                           K     T+   +               +I      R        
Sbjct: 533 GTVDSSTTVKKLVDTIKAAGGPTYQARWVD-PENGKDGGQPGGNIRQVFLYRTDRGTSFV 591

Query: 121 -----------------VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                            +       P      + +   +R+ +    +  G K++V+  H
Sbjct: 592 DKGTPGATTATGVTGRGLFTDLTVSPGRIDPTNTAFTDSRKPLVGEFKFRGTKVYVIANH 651

Query: 164 LKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINY 217
             S    D L   +      S +    QA  ++ +I +    +     V  GD N     
Sbjct: 652 FNSKGGDDPLFGRWQQPVRSSETQRHAQATVVRGFIDKLLAADPNARIVTLGDLNDFEFS 711

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                D                   +   +     N   +D+ ++     +  +  +   
Sbjct: 712 RTT--DILVGNRKTAMTDLPRTLPANERYSYVYEGNSQILDHILLSPKLAQPWLGLAKPL 769

Query: 278 ILYNE-DDIKSRGKRLSDHCP 297
             Y+          + SDH P
Sbjct: 770 FNYDIVHTNSEFPDQDSDHDP 790


>gi|145219569|ref|YP_001130278.1| endonuclease/exonuclease/phosphatase [Prosthecochloris vibrioformis
           DSM 265]
 gi|145205733|gb|ABP36776.1| Endonuclease/exonuclease/phosphatase [Chlorobium phaeovibrioides
           DSM 265]
          Length = 341

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/316 (10%), Positives = 85/316 (26%), Gaps = 54/316 (17%)

Query: 26  LVSWNINTLSE-------QEGVSLWKNSVKRTTSDYT----LLRQYAKNLD--------A 66
           ++ WN+  L +        +        +  T          +      ++         
Sbjct: 33  VMWWNLENLFDTRDDPSTNDSDFTPSGKLHWTAKKLKLKQMRIAFVISAIEKHPDYRRFP 92

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           DIV + E+ +   +     K     + +        +      I   +A   K +     
Sbjct: 93  DIVAVCEVENEAVLKATMAKVPKVHYKTLHHDSPDIR-----GIDVGLAYNPKTLAPTGM 147

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
               +  +        R  V       G+ + ++  H  S  F          + + +  
Sbjct: 148 KTYCVPLEG----RPTRDIVVAGFTAGGRPLHLVLNHWPSRAFDTRWTEKKRIAAATV-- 201

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPNDSLIRFPKE 240
            A+ + D + Q+       ++ GDFN +       +         + +   D+ +    +
Sbjct: 202 -ARAIVDSLLQR-NPQADIILMGDFNDEPGDRSLKETLGSSFSREQVLSEPDTYLYNCWD 259

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLI----------------QESFSEILYNEDD 284
                 + +   +   ID  ++     +                     S S+  +   +
Sbjct: 260 GHDGEGSYRYRGHWEQIDQMLVSSGMLQKSGLRLDSKPFSCFAISPMFPSNSKYPWRTYE 319

Query: 285 IKSRGKRLSDHCPISI 300
                   SDH P+ +
Sbjct: 320 KGKYSGGYSDHLPLLL 335


>gi|16329547|ref|NP_440275.1| extracellular nuclease [Synechocystis sp. PCC 6803]
 gi|1652030|dbj|BAA16955.1| extracellular nuclease [Synechocystis sp. PCC 6803]
          Length = 1879

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/340 (12%), Positives = 92/340 (27%), Gaps = 57/340 (16%)

Query: 16   CTASVAQKVRLVSWNINTLSEQ----------EGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
               +V   +++  +N+    +                  ++          L      +D
Sbjct: 1320 TPENVGGSLKVTGFNVLNYFKTIDLSGVSTAIGQDPRGADTTAEFDRQTDKLVTALLAID 1379

Query: 66   ADIVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVR 117
            AD++ L E+ +        NA+  +  +        T   +N   +    D I   +  +
Sbjct: 1380 ADVLGLAELENDFLPGSSGNAIENLVNELNAVAGAGTYNWVNPGTQFLGTDAIAVGLIYK 1439

Query: 118  KKNVRVLQQSYPLLG----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS----- 166
               V ++  +  L        ++     NR  V       + G+    +  H KS     
Sbjct: 1440 VSAVSLVGDAAILNTQAFLDPNNTGENRNRPTVAQTFRDLVTGETFTAVVNHFKSKGASG 1499

Query: 167  ------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYL 218
                          +         ++ AQ L  W+       +   +++ GD+N      
Sbjct: 1500 LTAGDAGNPDSDQNDGQGFWNDTRTKAAQELVTWLNTNPTGVNDSDYLLLGDYNAYAQED 1559

Query: 219  GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                   K ++    +    +       +         +DY     +    +   +   I
Sbjct: 1560 PI-----KALESAGYVNLGAQFSGGTNTSYVFDGQTGTLDYAFASASLAAQVTGATEWGI 1614

Query: 279  LYNEDDIKSRG---------------KRLSDHCPISIDYD 303
              +E D                     R SDH PI +  +
Sbjct: 1615 NADEADALDYNLDFGRDVNIFDGTVPYRSSDHDPIIVGLN 1654


>gi|260591557|ref|ZP_05857015.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           veroralis F0319]
 gi|260536588|gb|EEX19205.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           veroralis F0319]
          Length = 326

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 102/334 (30%), Gaps = 47/334 (14%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTSD 53
           M+R ++  L+  +   + + ++   +V  N   L +        +   L  +    T + 
Sbjct: 1   MLRLFLTFLLGVIPLYSEAQSR-FTIVELNTENLFDARHDTLKNDYEFLPNSPRHWTRAK 59

Query: 54  ----YTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
                    Q               D+V L E+ + + +  +  ++        +    +
Sbjct: 60  YWKKLNRTGQTIIACGEDSCGWRLPDLVGLCEVENDSVLFDLTKRS-----LLRKARYEY 114

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVL 160
               SN+     +A+              +      +    R  + +    ING  + VL
Sbjct: 115 VMTSSNDMRGIDVALLYSPFSFRLLKTDTIRVSLIANMQPTRDILYVKGAIINGDTLHVL 174

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
            +H  S    +       P    +  Q   + D I ++  S    ++ GDFN   +    
Sbjct: 175 LLHAPSRRGGE---MQSQPFRKHVMMQVSNVVDSIQRR-HSDAKVIVMGDFNDYADSPSL 230

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
              + + +     +    K K+      +       +D  ++ +N   +++    ++  +
Sbjct: 231 KPLYKRNLLN---VSAQAKGKNGAKGTYRYHGEWGSLDQILISENLRSYVLSCHINDAPF 287

Query: 281 --------------NEDDIKSRGKRLSDHCPISI 300
                          + +        SDH P+ +
Sbjct: 288 LLEEDIKYGGVKPRRDYNGMRYNNGFSDHLPLVL 321


>gi|325270240|ref|ZP_08136847.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           multiformis DSM 16608]
 gi|324987541|gb|EGC19517.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           multiformis DSM 16608]
          Length = 347

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 96/351 (27%), Gaps = 64/351 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50
           +RK +  L   ++  T++ AQK      +  +N   L +        +       S    
Sbjct: 1   MRKLLFVLFCTVLLGTSASAQKKFSVYAVGFYNQENLFDCTHDEGKNDYDFTPDGSYHWN 60

Query: 51  T----SDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
                     +      +  D+        + L E+ + + +  +  +       +    
Sbjct: 61  EMKYTHKLHNMATVLSEMGTDVLPKVGCALIGLAEVENDHVMRDLVAQPE---LAARGYH 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +   +  I  A+    K   +      P +      S    R  + +   + G+ +
Sbjct: 118 FVHIEGPDHRGIDCALLFNPKFFTIRNTKLVPYVYDLPKDSTRATRGFLTVSGTMAGEHV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V+  HL S                    Q + LKD +  + +  V  ++ GD N     
Sbjct: 178 TVVVCHLPSRGADSYYRELGGR-------QVKALKDSL-FRDDKDVKVIVMGDMNDDPTD 229

Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
              +D      +       +     +           +        D  +M  N      
Sbjct: 230 KSIHDCLSAKAEISEVGPGDMYNPWYNVLVKEGTGTLQYQGKWNLFDQIIMTPNLLDKEG 289

Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPIS 299
           ++ F E+ + ++ I  R                           SDH P+ 
Sbjct: 290 KKDFRELKFWKNQIFRRDYLFQETGKYKGNTKRTTAGGVWLDGYSDHLPVV 340


>gi|330967692|gb|EGH67952.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 380

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/342 (13%), Positives = 95/342 (27%), Gaps = 75/342 (21%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C  +V        Q +++++WNI  L+                  + + +    +
Sbjct: 52  LLTASCNPAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   +A ++P +T   ++  E + 
Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157
           +     S          R       +   P+  A     +   + A+ +      +G K+
Sbjct: 172 SPHIWGS-VGRKLTTLSRFHIDSAERLQLPVPDANIISRQFQPKNALLVSYLPLRDGGKL 230

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V++ HL +    D              +Q    +  + + +    P++I GDFN     
Sbjct: 231 AVINTHLATAKPGDG----------TAQKQIAATETLLDKLEGGGTPWLIGGDFNLLPLG 280

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-------------KNLRNKIPI------- 257
                   + I            +      N              +  N   I       
Sbjct: 281 QYQRLPEQQRISYTADSELHTLWEKYPMIPNNTESSGTDRSQWLTHFPNDSRINGPDRTV 340

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           DY     +  +     S      +          +SDH P+ 
Sbjct: 341 DYLFYSPSLKR----VSARVRRDDTLL-------ISDHLPVI 371


>gi|255327369|ref|ZP_05368443.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296]
 gi|255295649|gb|EET74992.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296]
          Length = 291

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 87/319 (27%), Gaps = 62/319 (19%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F        +  +R+ S N+N +                      +  +  + D DI+ L
Sbjct: 3   FSNTPAPRPSGLLRVASVNVNGIRAAYKKD---------------MAAWLASRDIDILCL 47

Query: 72  QEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKKNVRVLQQSY 128
           QE+ + +A+  ++  ++ W I ++       +          ++A  + +      + + 
Sbjct: 48  QEVRAPDAIVRELLDESQWHILHAEAAAKGRAGVLVATRRTPNSAGELLENQPVATRSNI 107

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                 DS         +      NGK + V+  ++ S       ++        +  + 
Sbjct: 108 GEEYFDDSGRWVEADYVL-----PNGKTLTVVSAYVHSGEVGTQKQDDKYRFLERMLVRM 162

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPND 232
             L              +I GD N     L   +                 F +      
Sbjct: 163 PELAK-------HSDHVLIVGDLNVGHTELDIKNWKANQKRAGFLPEERAYFDRFFGDIG 215

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
                 +              +           IDY +      +  +           D
Sbjct: 216 YRDVARELAGQVPGPYTWWSYRGKAFDNDAGWRIDYHMATPALAESAV-------EAVVD 268

Query: 284 DIKSRGKRLSDHCPISIDY 302
              S  +R SDH P+ +DY
Sbjct: 269 RAASYDERFSDHAPLVVDY 287


>gi|326801928|ref|YP_004319747.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326552692|gb|ADZ81077.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 310

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 77/303 (25%), Gaps = 38/303 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           AQ+  + ++NI   + +E  +      +R       +    +  + DI   QE   +   
Sbjct: 24  AQRFYVATYNIRNDNNKEDAARGDGWKQRYPI----IADLIRFHEFDIFGTQEGLYHQLE 79

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +            +   S    +T       +      +      K  +   
Sbjct: 80  DLKSSLPNYNYTGVGRDDGKQAGEYSAIFYNTEKFDLLDHGDFWLSTQTDYPNK-GWDAV 138

Query: 141 GNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             R      +++  NGK ++  ++H     F          S  L+  + + L       
Sbjct: 139 LPRICSWAKLQVKANGKTLYFFNVH-----FDHVGTTARKESAKLILSKVKELA------ 187

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IP 256
                  ++ GDFN   +           I  +       +   +    N N  +K    
Sbjct: 188 --GNHTAILTGDFNVDQHSNSYQVLEQSHILQDAFEAAPFRYVTNGTFNNFNPNSKTDSR 245

Query: 257 IDYFV----------------MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ID+                                            R +  SDH P+ I
Sbjct: 246 IDHIFLTTDFKVHKYGILTDTYRSTLQNPQEAYQSGNFPKEVRLTDHRARVPSDHFPVMI 305

Query: 301 DYD 303
             D
Sbjct: 306 SLD 308


>gi|254509674|ref|ZP_05121741.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221533385|gb|EEE36373.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 333

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 92/333 (27%), Gaps = 54/333 (16%)

Query: 24  VRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQEMG 75
           +RL ++NI   +      + +    +   R           + +    LDAD + + E  
Sbjct: 1   MRLATYNIEWFANLFDTDDNLLADDSWSGRHDVTRAQQIEAIAKVLTALDADALLIVEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           +                 + +    H+     N+ H  +A+      +  +  P+    D
Sbjct: 61  NTGKRQNTVRAL-QRFAEAFDLRTTHAVMGFANNTHQELALLFDPGTLKARHEPVGHPDD 119

Query: 136 SFSRAG-------------------NRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLEN 175
             +                      ++  +EL VE   G    ++  HLKS     +   
Sbjct: 120 DDAPRFDGVFRIDLDVDATEDRVQFSKPPMELTVETAKGTAFRLIGAHLKSKAPHGAKSR 179

Query: 176 TYS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK---- 226
                    +      QA WL   +    E+  P ++ GD N           F +    
Sbjct: 180 DELIRLSIANRRKQLAQAIWLSRRVEALVEAKEPVILLGDLNDGPGLDEFEHLFGRSSVE 239

Query: 227 -TIDPNDSLIRFPKEKDSRCNANKNLRNKIP----------IDYFVMDQNAYKFLIQESF 275
             +          +    R  +                   +DY ++  +          
Sbjct: 240 ILLQAGLYDPHAAQAHGPRPGSVPATARFARPDEGRYLEALLDYIMISTDLRDRHPNWRI 299

Query: 276 SEILYNEDDIKSRGKR-----LSDHCPISIDYD 303
                + D   +   R      SDH P+++D D
Sbjct: 300 WHPFRDTDCWGNPELREALLTASDHFPVTLDID 332


>gi|160884059|ref|ZP_02065062.1| hypothetical protein BACOVA_02035 [Bacteroides ovatus ATCC 8483]
 gi|237717295|ref|ZP_04547776.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|260173235|ref|ZP_05759647.1| hypothetical protein BacD2_15295 [Bacteroides sp. D2]
 gi|262406061|ref|ZP_06082611.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294648127|ref|ZP_06725670.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294806852|ref|ZP_06765677.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|315921508|ref|ZP_07917748.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156110401|gb|EDO12146.1| hypothetical protein BACOVA_02035 [Bacteroides ovatus ATCC 8483]
 gi|229443278|gb|EEO49069.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356936|gb|EEZ06026.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292636511|gb|EFF54986.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294445881|gb|EFG14523.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|295085506|emb|CBK67029.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A]
 gi|313695383|gb|EFS32218.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 257

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 88/301 (29%), Gaps = 51/301 (16%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           K ++ +  F     ++ AQ ++++S+N     E  G S+ +               + + 
Sbjct: 6   KPIVWVCLFFFAYQSTYAQALKIMSYNCRMSGEMTGYSVKEY------------AVFIRK 53

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            + D+V LQE+       K     T          +     D+    +  +A+  K   V
Sbjct: 54  YNPDVVMLQEIDYNTKRNKNQDFTTQLAAELGLFSVFGKAMDTGGGEY-GVAILSKYPFV 112

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                     +        R  + + ++  G    V+ I          L         +
Sbjct: 113 ---YINNKTFEGIDGAKEPRTLLYVDIQEPGTS-DVIRIGTTHLDHSTDL---------I 159

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            S  A+ + + I        P ++ GDFN + +     +                +    
Sbjct: 160 RSAMAEQINERIGT---GDTPTLLGGDFNARTDSNVICEVMKNW-----------QRICD 205

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   +  I IDY          +   SF  +             +SDH  +  + +
Sbjct: 206 DTFTYPADQPTIKIDYIFGLPQNKWKVK--SFKVLS---------NPEVSDHRALFAEVE 254

Query: 304 F 304
           F
Sbjct: 255 F 255


>gi|126735878|ref|ZP_01751622.1| exodeoxyribonuclease III [Roseobacter sp. CCS2]
 gi|126714435|gb|EBA11302.1| exodeoxyribonuclease III [Roseobacter sp. CCS2]
          Length = 266

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 81/303 (26%), Gaps = 63/303 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  +      D+  LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------VKARIGALTDWIDEAQPDVAVLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +           ++           +A+  K                      + 
Sbjct: 42  FPREVF-------EDKGYNVETHGQKGFNGVAILSKLPLEDVTRGLPGAEGAGREGVDDE 94

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            A  +   + G K + +  ++L +       +  Y        +  + L     Q     
Sbjct: 95  EARYIEATVVGEKAVRICGLYLPNGNPAPGPKYDYK------LRWMERLHARAQQLMAHE 148

Query: 203 VPFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCNAN 248
              ++ GD+N               +D  ++    +              + +++     
Sbjct: 149 EVALMCGDYNIIPQAEDAARPDAWRDDALFRQDSRDAYRRILNLGFTEAFRAREAGAGHY 208

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+F++       L        +          ++ SDH P+ 
Sbjct: 209 SFWDYQAGAWDKNDGIRIDHFLLTPQCADLLNTCWIESDV-------RGREKPSDHVPVW 261

Query: 300 IDY 302
           +D 
Sbjct: 262 VDL 264


>gi|170733178|ref|YP_001765125.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
 gi|169816420|gb|ACA91003.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
          Length = 284

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 81/307 (26%), Gaps = 52/307 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+ WNI    + +G             D        + L D D++ LQE+        
Sbjct: 1   MRLIDWNIQWGRDADGG-----------VDLPRTVAAIRRLGDFDVLCLQELTRGFDALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                +   ++                    R          A+  +          L  
Sbjct: 50  GRPGPDQFTELAALLPGYTIVDAIGADLPPIRPDAPRRQFGNAIATRLPVGRVLRQLLPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D+ + +  R A+++ ++     + V+  HL+ +            +     ++A    
Sbjct: 110 PADAGTPSMPRVALDIELQAPFGSLRVVTTHLEYYSARQ--RLAQVDALRDRHREACAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           D     +    PF         ++ GDFN   +            D    +  +      
Sbjct: 168 DQPAPAETPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRFVEPIADAPSFVDAWIARHPG 227

Query: 244 RC--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     +  +     +  D+  +       +I                   R SDH
Sbjct: 228 HTPPPTAGIYDTAQWSDGPLACDFVFVTDTLLPRVIGCEI-----------DGDVRASDH 276

Query: 296 CPISIDY 302
            P+ ++ 
Sbjct: 277 QPVLLEL 283


>gi|45185974|ref|NP_983690.1| ACR288Wp [Ashbya gossypii ATCC 10895]
 gi|74694735|sp|Q75BI3|CCR4_ASHGO RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|44981764|gb|AAS51514.1| ACR288Wp [Ashbya gossypii ATCC 10895]
          Length = 736

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 86/325 (26%), Gaps = 42/325 (12%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +   L+S+N      +  +      +           L+        DI+ LQE+ S   
Sbjct: 396 KSFTLLSYNTLCQHYATPKMYRFVPSWALSWDYRREKLKDEVLAYQTDIICLQEVESKTY 455

Query: 80  VAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                P      +    ++  R      +D+       I  +      + +      +  
Sbjct: 456 EEFWLPILEKQGYSGIFHAKTRARTMQSKDAKKVDGCCIFYKNSEFTAVFKDAIDFSSVW 515

Query: 136 SFSRAGNR---------------RAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSP 179
              +   R                 ++L  E  G+ +WV+  HL     F D      + 
Sbjct: 516 MKHKKFQRTEDYLNRAMNKDNVALIIKLRHERTGEHVWVVTTHLHWDPHFNDVKTFQVAV 575

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-----------GNNDDFWKTI 228
               + +  +      + + +  +P VI GDFN +++              + D   +  
Sbjct: 576 MLDYIEKLLKQHGGVGSPQDKKKIPLVICGDFNSQLDSAVVELFNTGSVRSHKDIEGRDF 635

Query: 229 DPNDSLIRFPKEKDSRCNANK--------NLRNKIPIDYFVMD-QNAYKFLIQESFSEIL 279
                              +         +      IDY     Q      +        
Sbjct: 636 GYMSQKNFAHGLALKSSYGSIGELPFTNLSPTFTDVIDYIWYSTQALRVRGLLGEIDPAY 695

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
             +       K  SDH P+   ++F
Sbjct: 696 AAKFIGLPNDKIPSDHIPLLARFEF 720


>gi|325919446|ref|ZP_08181471.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865]
 gi|325550066|gb|EGD20895.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865]
          Length = 1110

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/340 (11%), Positives = 95/340 (27%), Gaps = 54/340 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKN--LDADIV 69
           P     A  V + ++N+    + +                +         +N     DI+
Sbjct: 493 PAPLPQADDVAVATYNMERFFDDQNDPAIGEPVLTPAAFQARLNKASLAIRNSLHTPDIL 552

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRK-----KN 120
              E+ + + +  +  +         +   ++     + +    I     V+        
Sbjct: 553 GTVEVENISVLQTLAARINADAVAGGQPDPHYVAYLQEGNDVGGIDVGFLVKTGAVSAGV 612

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGK-----KIWVLDIHLKSFC 168
            RV   S    G   +++           R  + L  +++        +  + +H +S  
Sbjct: 613 PRVEVVSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTAKVHQADGRVLPLTAIVVHQRSLN 672

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
             ++ +   +   +    QA++L   +   Q+ +     ++ GDFN      G  D    
Sbjct: 673 GAETDDAAGTRIRAKRQAQAEYLARLLQTRQQLDPAEQVLVMGDFNAFEFNDGYVDAMGT 732

Query: 227 T------------------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                              +   D           +  +     N   +D+ + ++   +
Sbjct: 733 VTGRPAPDAQTVVSGDGVDLVNPDYTDLTWFNTPDQSYSYAFDGNVQSLDHIIANEALMR 792

Query: 269 FLIQESFSEILYNEDDIKSRGK--------RLSDHCPISI 300
                S S    + +               RLSDH P  +
Sbjct: 793 APNIASLSVGHASINADFPGTARNDANTPTRLSDHDPTVV 832


>gi|317048409|ref|YP_004116057.1| exodeoxyribonuclease III [Pantoea sp. At-9b]
 gi|316950026|gb|ADU69501.1| exodeoxyribonuclease III [Pantoea sp. At-9b]
          Length = 268

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 78/310 (25%), Gaps = 75/310 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEALVEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  K   V          +D+      R
Sbjct: 42  FP-------LEEVSKLGYHVFYHGQKGHYGVALLTKAEPVAVHRGFPSDGEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +        +  Q L+ ++  +     
Sbjct: 90  RLIMAEIPSPIGDITVIN-----GYFPQGESRDHPIKFPAKEKFYQDLQSYLQTQLAVDK 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N                               +   + ++    +  +  + 
Sbjct: 145 PVLIMGDMNISSTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLLN-WGLVDTWRAQY 203

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +  Q      I           D      ++ 
Sbjct: 204 PETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLASRCIASGI-------DYDIRSMEKP 256

Query: 293 SDHCPISIDY 302
           SDH P+   +
Sbjct: 257 SDHAPVWSTF 266


>gi|257052454|ref|YP_003130287.1| Endonuclease/exonuclease/phosphatase [Halorhabdus utahensis DSM
           12940]
 gi|256691217|gb|ACV11554.1| Endonuclease/exonuclease/phosphatase [Halorhabdus utahensis DSM
           12940]
          Length = 260

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 64/281 (22%), Gaps = 31/281 (11%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N+   + ++G         R  +    +    +    D+V LQE   +         
Sbjct: 1   MTYNVRYDNPEDGE-------HRWANRREAVSSTIRFHAPDVVGLQEPLDHQLADVADRL 53

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
            ++    S           +     T                P       +     R   
Sbjct: 54  PSFEWIGSGRVDGESEGEHTPIGYRTDRIEYVDGDTFWLSEAPEEPGSVGWDARYPRIVT 113

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
              +        +L  +     F          S  LL                   P V
Sbjct: 114 WARLRDRRTDATLLFANTH---FSHDGPRARRKSAHLLLD--------RLADLRDDEPVV 162

Query: 207 IAGDFNRKINYLGN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
           + GDFN              D         +          +     +NL     ID+  
Sbjct: 163 LTGDFNCVAGEEPYEILTGEDSPLALSGEQERSAEPAHGPPTSVTDFENLVPNRKIDHVF 222

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +                  D+   G+  SDH P+ ++ 
Sbjct: 223 TTPDVTVGTHGV--------CSDVYDDGRFPSDHLPVLVEL 255


>gi|226195815|ref|ZP_03791402.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|225932300|gb|EEH28300.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pakistan 9]
          Length = 648

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 88/288 (30%), Gaps = 30/288 (10%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K LDAD++ L E+ 
Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYDEFVRQDAKIVSALKALDADVIGLMEIE 353

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +          +    +  +   +   S R   + I  A+    + V+      P+  A 
Sbjct: 354 NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVK------PIGNAA 407

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS    D+  +            +  S+
Sbjct: 408 TLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSR 467

Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  S 
Sbjct: 468 AAAKIADWLARNPTGTPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKVGSG 522

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
             +         +D+ +        +       I     D  +   R+
Sbjct: 523 AYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINAGRADRPAIHARI 570


>gi|24372651|ref|NP_716693.1| extracellular nuclease [Shewanella oneidensis MR-1]
 gi|24346694|gb|AAN54138.1|AE015551_2 extracellular nuclease [Shewanella oneidensis MR-1]
          Length = 871

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 102/378 (26%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66
             + +    +R+ S+N+          +      N    T        T +      ++A
Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGGNRGALTEEEMLLQRTKIVSAITAMNA 514

Query: 67  DIVFLQEMGSY-----NAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +      +A+  +          +N +      +      K   ++ I   
Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTTENAYSYIQIADTDKYDGKYFGSDAITVG 574

Query: 114 IAVRKKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V +                  + +        +  + A  R ++    +I+ +
Sbjct: 575 MLYRAGKVSLAGAARTIETPEQHASVGSVTRIKDGKTETNPGNDAYQRHSLAQTFKIHDQ 634

Query: 156 KIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS                   +            A+ L + +   K     
Sbjct: 635 NLTVVVNHLKSKNSGCLEDWVNFEESVDPADLQGRCNEFRVSAAKVLGEALKDVKGDLLV 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPK 239
                      P  +  DF+   +        W T++                 +    K
Sbjct: 695 IGDMNAYGMEDPLRVLTDFDASKSDRDIMTASWTTLNGKVYERQGSKIDKGYGLINLNTK 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + + +  K L+      I   E  +   GK+        
Sbjct: 755 AHGTGTYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESSLFEFGKKFSGNLVKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ +   +
Sbjct: 815 ENAFSASDHDPVIVALSY 832


>gi|317486298|ref|ZP_07945130.1| exodeoxyribonuclease III [Bilophila wadsworthia 3_1_6]
 gi|316922468|gb|EFV43722.1| exodeoxyribonuclease III [Bilophila wadsworthia 3_1_6]
          Length = 263

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 78/305 (25%), Gaps = 70/305 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +RLVSWN+N      G   W                +  + DAD+V LQE        
Sbjct: 2   DTIRLVSWNVNGFRALSGKPDW---------------DWFASTDADVVALQE-------T 39

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K  P        S E              ++ +AV  +    L+         D   +  
Sbjct: 40  KAEPSQIAEEHRSPEGWNAEWLAAQVKKGYSGVAVFSRQKAALEPLAVHRELPDPRYQGE 99

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      + I        +++  +    D                A+ L+         
Sbjct: 100 GRL-----LHIEYPAFHFFNVYFPNGTKDDGRLAYKMGYYDAFLAHAEELRR-------- 146

Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+ GDFN                   +L     +         +  F        +
Sbjct: 147 TKPIVVCGDFNTAHRPIDLARPKANEENSGFLPIERAWVDRFIAAGYVDTFRHIHGDEPH 206

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  K           IDYF + +     +        +Y            SDHCP
Sbjct: 207 QYSWWSYKQRARVNNVGWRIDYFFVSEELAPAIRDAWIENNVY-----------GSDHCP 255

Query: 298 ISIDY 302
           + ++ 
Sbjct: 256 VGLEL 260


>gi|322514720|ref|ZP_08067746.1| exodeoxyribonuclease III [Actinobacillus ureae ATCC 25976]
 gi|322119315|gb|EFX91431.1| exodeoxyribonuclease III [Actinobacillus ureae ATCC 25976]
          Length = 305

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 79/311 (25%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +   +   
Sbjct: 39  MKFISFNINGL----------------RARPHQLEALIEKHQPDVIGLQEIKVADEDFPW 82

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     + +F+                 H  +A+  K   +  +        D+  R  
Sbjct: 83  DLVNHLGYHVFHH------------GQKGHYGVALLTKKEPLAVRKGFPTDDADAQKR-- 128

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + VL+       F       +        +    L+ ++  +   
Sbjct: 129 ---MIMADIETEFGVLTVLN-----GYFPQGENRAHETKFPAKEKFYADLQHYLETELTP 180

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P VI GD N                          L    ++   +     +  F   
Sbjct: 181 ENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFLPEEREWLDRLYNYGLVDTFRVM 240

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +  +      ++          D      ++
Sbjct: 241 NPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAGHCVETGI-------DLEIRAMEK 293

Query: 292 LSDHCPISIDY 302
            SDH P+   +
Sbjct: 294 PSDHAPVWAVF 304


>gi|302546317|ref|ZP_07298659.1| endonuclease/exonuclease/phosphatase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302463935|gb|EFL27028.1| endonuclease/exonuclease/phosphatase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 636

 Score = 93.5 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 75/321 (23%), Gaps = 65/321 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + ++ + ++N+  LS +   S +         +             DIV L+E+   N  
Sbjct: 330 SGELSVATYNVENLSPKTAQSKFDRLASGLVDNLA---------SPDIVALEEVQDDNGA 380

Query: 81  -----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
                            A          +       +        +I  A     K V  
Sbjct: 381 TNDGVVSADATLKKLTDAIAAAGGPSYSWRQINPADDQDGGQPGGNIRVAFLYNPKRVSF 440

Query: 124 LQ---------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
                                   + P      S     +R+ +       G+ ++V+  
Sbjct: 441 TDIPGGDATTPVKVVQDGGKAALSASPGRIEPGSDVWKDSRKPLVGQFAFRGRPVFVVAN 500

Query: 163 HLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKIN 216
           H  S      L+         S +  + QA  +  ++      +     V+AGD N    
Sbjct: 501 HFNSKGGDQGLDARVQPPARSSETQRTGQATAVNTFVKSLLAADPKAAVVVAGDLNDYQF 560

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                                 +   +         N   +D+ +  +            
Sbjct: 561 SP----ALSALTKGGVLTDLVTRFPRNERYGYVYNGNSQVLDHILTSRALRG-------- 608

Query: 277 EILYNEDDIKSRGKRLSDHCP 297
                         + SDH P
Sbjct: 609 PDYDIVHLNAEFADQSSDHDP 629


>gi|158424436|ref|YP_001525728.1| exodeoxyribonuclease III [Azorhizobium caulinodans ORS 571]
 gi|158331325|dbj|BAF88810.1| exodeoxyribonuclease III [Azorhizobium caulinodans ORS 571]
          Length = 262

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 83/302 (27%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                           + K    D+V LQE+         
Sbjct: 1   MRIATWNVN----------------SVRLRTEHAVAWLKEAQPDVVCLQEIKCQTE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K       +       D  +R    
Sbjct: 41  ------QFPREPFEALGYNVAVHGQKGFNGVAILSKRPLEDVTNGLAGDDSDVQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V + G  + V  I+L +     + +  Y             LK +   + +   
Sbjct: 92  --IEAVVSVPGGVVRVCCIYLPNGNPPQTEKYDYKLGFMAR------LKAFTESRLKLEE 143

Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPN-DSLIRFPKEKDSRCN 246
           P ++AGDFN                  +        F + I+      +R   + +    
Sbjct: 144 PLILAGDFNVIPDARDAADPAAWVEDALYLPRTRAAFREIINLGMTDALRATSDAERLFT 203

Query: 247 ANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         I ID+ ++   A   LI           D      +R SDH P  I
Sbjct: 204 FWDYQAGAWQRDFGIRIDHLLLSPQAADRLIGAGI-------DKHLRALERPSDHVPAWI 256

Query: 301 DY 302
           D 
Sbjct: 257 DL 258


>gi|187924588|ref|YP_001896230.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
 gi|187715782|gb|ACD17006.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
          Length = 258

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/302 (9%), Positives = 82/302 (27%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  + +    D++ LQE          
Sbjct: 1   MKIATWNVNSL----------------KVRQQHVIDWLETSGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  + +  +    + +   +      F     R
Sbjct: 35  LKLPDEKFPRAELEEKGYRSWFAGQKTYNGVGILVRGGLTVDEGSIVRNIP-GFEDPQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +E     + ++  +  +     + +  Y        +    L DWI  +     
Sbjct: 94  -VIAATIE----GVRIISAYFPNGQAPGTDKFAYK------LRWLAALHDWIASEMALHP 142

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
              + GD+N   +    +D      + +   +            L+   ++ +       
Sbjct: 143 KLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAAFVRLIELGLLDAFRQFEQPEKIYS 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++ +                + D +  +  + SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSKALADVCSSC-------DVDKVPRKWDQPSDHAPVVA 255

Query: 301 DY 302
             
Sbjct: 256 QL 257


>gi|83312933|ref|YP_423197.1| hypothetical protein amb3834 [Magnetospirillum magneticum AMB-1]
 gi|82947774|dbj|BAE52638.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
          Length = 330

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/333 (9%), Positives = 101/333 (30%), Gaps = 61/333 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78
            +R+ ++N+  L E+    +  +          L+R   + L AD++ LQE+ +++    
Sbjct: 3   PLRIATFNLENLDERPAGGIDFD------DRVALMRPQFQRLRADVLCLQEVNTHSVTKS 56

Query: 79  ------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-- 130
                 A+ ++     +       R+ + ++   +      + +  K      +      
Sbjct: 57  GPRLFTALDRLLAGTEYE---HWHRVHSLNRGGVHPSDKHNLVIISKMPIRAHRQVWHDL 113

Query: 131 ------------LGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTY 177
                           +      +R  +   +    G+ + V+++HL++   +       
Sbjct: 114 VPPCAYRPVRANPAPDEPQRVEWDRPILHAELGLPGGRSLHVINVHLRAPRAVWLQGQKE 173

Query: 178 S---------------PSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGN 220
                            +    + QA  ++  + +          V+ GDFN   +  G 
Sbjct: 174 RFGRWLSVGGWAEGYFLAGVKQAGQALEVRLLVEEIFDARPDALVVVCGDFNAGEHEAGM 233

Query: 221 N-------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                   D     +     +       + +  +  +    + +D+ ++ +    + +  
Sbjct: 234 RIIKGDDEDTGNGHLAMRMLVPLERSLPEGQRYSVIHHGRPVMLDHILVSRPLLGWYLGA 293

Query: 274 SFSEILYNEDDIKSRGKRL---SDHCPISIDYD 303
                   ++ +          S H P+  ++ 
Sbjct: 294 EIHNETLGDELVSPATIHAPPESYHAPVVAEFS 326


>gi|60682549|ref|YP_212693.1| hypothetical protein BF3080 [Bacteroides fragilis NCTC 9343]
 gi|60493983|emb|CAH08775.1| putative conserved exported protein [Bacteroides fragilis NCTC
           9343]
          Length = 344

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 84/326 (25%), Gaps = 56/326 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+V WN     +    SL  +           + +R       + +    +       
Sbjct: 24  PFRVVFWNTENFFDTRHDSLKNDMEFLPHSMRHWNHRRYKKKLDNVARTLTAIGEWNFPA 83

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ L E+ +   +  +     +            +       I+ A+  ++   ++L   
Sbjct: 84  LIGLCEVENDTVMRDL---TLYSPLKEAGYRYVMTHCSDLRGINVALLYQRDRFKLLS-- 138

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           Y  L   +       R  + +  + + G  + ++  HL S             S      
Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGV------RQSEPYRLY 192

Query: 187 QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT------IDPNDSLIRFP 238
            AQ LKD              +I GDFN                            +   
Sbjct: 193 AAQKLKDAADSLINVRPSTKLIIMGDFNDYPTDKSVVQVLQALSPEVSTHHDRLYHLLAR 252

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-------------------- 278
           K KD    + K       +D+ ++              E                     
Sbjct: 253 KAKDRNFGSYKYQGEWGLLDHLIVSGTLLDVSGTLFTEEKKANVACLPFLLTKDEKYGGM 312

Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303
             +         +  SDH P+ +D++
Sbjct: 313 QPFRTYVGMKYQEGYSDHLPVYVDFE 338


>gi|253569415|ref|ZP_04846825.1| metallophosphoesterase [Bacteroides sp. 1_1_6]
 gi|251841434|gb|EES69515.1| metallophosphoesterase [Bacteroides sp. 1_1_6]
          Length = 611

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 83/304 (27%), Gaps = 63/304 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L +   L+         +RL+++NI   +  +GV            D+  +    
Sbjct: 4   MKKIFLLISAILLIVPVQAQHTLRLMTYNIKNATGMDGVC-----------DFQRIANVI 52

Query: 62  KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   D+V +QE+    + +    V  +                     +     I +  
Sbjct: 53  NNASPDVVAVQEVDSVTNRSNQKYVLGEIAERTQMYACFAPAID----YDGGKYGIGLLS 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   V  Q+  L G      R   R  +    E           HL              
Sbjct: 109 KKAPVHLQTIALPG------REEARALILAEFE----DYIYCCTHLSLTEED-------- 150

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                  +  + LK +    K+   P  +AGD N +                 +    F 
Sbjct: 151 -----RMKSLEILKTFAASYKK---PLFLAGDMNAEPESDFIK----------ELQKEFR 192

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              + + +       K  IDY    +   K     S   +              SDH PI
Sbjct: 193 ILSNPKQHTFPAPVPKETIDYVAAFKQNDKGFAVVSSEVVNEPV---------ASDHRPI 243

Query: 299 SIDY 302
            ++ 
Sbjct: 244 VVEL 247


>gi|302382164|ref|YP_003817987.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192792|gb|ADL00364.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
          Length = 264

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 81/306 (26%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                        + ++      D++ LQE+     +   
Sbjct: 2   LRVATWNIN----------------SVRLRIDQVARFVAESGTDVLCLQEI---KCLEDQ 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+N +        +     + +       +A+  +      +++               
Sbjct: 43  FPRNAFA------DMGLPHLKIAGQKGWHGVAIASRRPIEPSETFQSCKLGH-------- 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  + V++ G  I     +       D  +   +P         + L   +  + +   
Sbjct: 89  -ARCVSVQVAGVDIQ----NFYIPAGGDVPDRELNPKFDHKMDFYEQLTATVAAQ-DRSR 142

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GDFN   +                     +   +            +        
Sbjct: 143 PLLMCGDFNIAPSEFDVWNHRYMSKIVSHTPIEVETLNRLQVAGAFTDVVREAFPEPQKL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+          ++  S         +      + SDHCP
Sbjct: 203 ASWWSYRAEDFRKSARGLRLDHIWTSPGLTPAVVAGSA-----TIHEPVRAWTQPSDHCP 257

Query: 298 ISIDYD 303
           I++D D
Sbjct: 258 ITVDLD 263


>gi|311895360|dbj|BAJ27768.1| hypothetical protein KSE_19440 [Kitasatospora setae KM-6054]
          Length = 809

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/328 (12%), Positives = 84/328 (25%), Gaps = 69/328 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79
            ++ + ++N+  L   +G              +  L Q         DIV L+E+   N 
Sbjct: 502 NELTIGTYNVENLDPGDG-----------PEKFARLAQGVVTNLASPDIVALEEIQDDNG 550

Query: 80  VA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIH---------- 111
                               K      +    S +        +   +I           
Sbjct: 551 AVNDGTVGAATTVRTFVDAIKAAGGPAYDW-RSIDPEDGKDGGEPGGNIRQVFLFDPARV 609

Query: 112 -----------TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                      TA+ V  KN +    + P      + +   +R+ +    E  GK ++V+
Sbjct: 610 SFTDIPGGTATTAVDVTGKNHKTSLTASPGRIDPGNEAWTSSRKPLVGQFEFKGKPVFVI 669

Query: 161 DIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRK 214
             H  S      +++        S     +QA   + ++ +    +     V  GDFN  
Sbjct: 670 ANHFNSKGGDQGIDSRFQAPTRSSEVQRVKQATVEQAFVAKLLAADPKARIVSLGDFNDY 729

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                                   +       +     N   +D+ ++            
Sbjct: 730 QFSP----ALQTLTKDGVLRDLVNELPAEERYSYVYQGNSQVLDHILVSPALKPEKTHYD 785

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
              I            + SDH P  +  
Sbjct: 786 VVHIN------SEFAAQASDHDPQVVRI 807


>gi|187478127|ref|YP_786151.1| exodeoxyribonuclease III [Bordetella avium 197N]
 gi|115422713|emb|CAJ49240.1| exodeoxyribonuclease III [Bordetella avium 197N]
          Length = 261

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 77/302 (25%), Gaps = 72/302 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L +WN+N+L                      +  +      D + LQE+   +       
Sbjct: 3   LATWNVNSL----------------KVRLPQVIDWLNANPVDALCLQELKLADD------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                        I +    +    +  +A+  +        + L      +     R  
Sbjct: 41  ----KFPLEAFTEIGYHAAWAGQKTYNGVAILSREP-----GFALTRNIPGYEDPQQR-V 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           + + +      + V+  +  +   LDS +  Y        +    L+ W+ ++  +    
Sbjct: 91  IAVTLPSPAGDVRVISAYCPNGQSLDSDKYPYK------LEWFGALRHWLEEELRTYPRL 144

Query: 206 VIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            I GD+N                           F   +D    L    +       +  
Sbjct: 145 AILGDYNVAPADEDVHNPEKWEGQVLVSAPERQAFQALLDLG--LTDAFRLFAQPEKSFS 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++        +           D      ++ SDH P+  
Sbjct: 203 WWDYRMFGFRRNAGLRIDHILLSDALKPTCVACII-------DKGPRGNEQPSDHTPVVT 255

Query: 301 DY 302
             
Sbjct: 256 TL 257


>gi|297563086|ref|YP_003682060.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847534|gb|ADH69554.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 275

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 73/306 (23%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +    D D++ +QE  + +     
Sbjct: 1   MRIATWNVN----------------SARARAERIGAWLDRSDVDVLAIQETKARDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S      +            +A+  +      +    +G           
Sbjct: 41  ------QFPASVLTDRGYEVAHHGLSQWNGVAIASRVGLEDVR----IGFPGQPGYGDPE 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201
            A    +      + V  +++ +   +D     Y        +  + L++        + 
Sbjct: 91  EAEARAIGATCGGVQVWSLYVPNGREVDHPHYAYK------LRWLEALREAGAASLAADP 144

Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                  GDFN                  +        +  +                  
Sbjct: 145 GAQIAYVGDFNIAPRDEDVWDMAAFEGSTHVTEPERVAFDKLVGAGFDEVVRAYTPGP-G 203

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  K         + ID+ +        +   S        D  + +GK  SDH P
Sbjct: 204 VYTYWDYKGLAFPKRRGMRIDFVLASPALRDRVSGASI-------DREERKGKGASDHAP 256

Query: 298 ISIDYD 303
           + +  D
Sbjct: 257 VIVGLD 262


>gi|166363474|ref|YP_001655747.1| exodeoxyribonuclease III [Microcystis aeruginosa NIES-843]
 gi|166085847|dbj|BAG00555.1| exodeoxyribonuclease III [Microcystis aeruginosa NIES-843]
          Length = 266

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 94/308 (30%), Gaps = 73/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                   S    +  + +    +++ LQE  +   +   
Sbjct: 1   MKIATWNVN----------------SIRSRQEQVINWLQLNPVEVLCLQETKVIDRDFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSR 139
           + F    + ++ S                +  +A+  +     +     P++G   +   
Sbjct: 45  EAFESLGYHLYIS------------GQKSYNGVAIFSRKPLDDITVGFSPIIGENLTGEL 92

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              +R +  ++      I ++++++ +   LDS +  Y        +  + L+ ++ +  
Sbjct: 93  DEQKRVITGVI----GDIRIINLYVPNGSSLDSDKYIYK------LKWLETLRKYLDKII 142

Query: 200 ES-LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSR 244
            S      I GDFN  +      D   K                     L    ++  S 
Sbjct: 143 NSQPEELCICGDFNIALEDKDIYDPKGKENHIMSSAKEREALEKVLEIGLQDAFRKFTSA 202

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           ID+  +    Y+  +           D    + ++ SDH
Sbjct: 203 AGHYSWWDYRSGGFARNRGWRIDHLYLTPQLYEKAVNCLI-------DREPRKQEKPSDH 255

Query: 296 CPISIDYD 303
            P+ ++  
Sbjct: 256 TPVILEIS 263


>gi|256061437|ref|ZP_05451581.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           neotomae 5K33]
 gi|261325444|ref|ZP_05964641.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33]
 gi|261301424|gb|EEY04921.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33]
          Length = 369

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 99/366 (27%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S ++N                +  R       +          
Sbjct: 2   FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 62  ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        S+  L   D                 R   R  + + + I G+ +
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213
            +   HLKS     + ++  + S  +   +A+ ++  I +K      +   ++I GDFN 
Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +                  
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +DY +                      +       + +           ++SDHCP
Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKVSDHCP 361

Query: 298 ISIDYD 303
           +S+  +
Sbjct: 362 VSVTLN 367


>gi|53719925|ref|YP_108911.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|167824992|ref|ZP_02456463.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 9]
 gi|226195468|ref|ZP_03791056.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9]
 gi|52210339|emb|CAH36318.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|225932428|gb|EEH28427.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9]
          Length = 258

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L+                     +  +    D D++ LQE          
Sbjct: 1   MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    +    +  +A+  +       S P        +  G  
Sbjct: 35  LKIPDEKFPREALEAAGYRSWFAGQKTYNGVAILAR------ASLPFDETDIVRNIPGFE 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A + L+      + ++  +  +   LDS +  Y        Q    L+ W+  + +   
Sbjct: 89  DAQQRLIAATIDGVRIVSAYFPNGQALDSDKFVYK------MQWLDALRAWLKDELQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++     +     +        D +    ++ SDH P+  
Sbjct: 203 WWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPRTWEQPSDHTPVVA 255

Query: 301 DY 302
             
Sbjct: 256 QL 257


>gi|83952174|ref|ZP_00960906.1| exodeoxyribonuclease III [Roseovarius nubinhibens ISM]
 gi|83837180|gb|EAP76477.1| exodeoxyribonuclease III [Roseovarius nubinhibens ISM]
          Length = 260

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 78/305 (25%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ S+NIN                   +    L  +      D+  LQE+     N   
Sbjct: 1   MKIASFNING----------------IKARIDALPAWLDEAQPDVAILQEIKSVDENFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F +  + +                      +A+  K               D  +R  
Sbjct: 45  EIFEERGYQV------------ETHGQKSFNGVAILSKLPLEDVTRGLPGDDADEQARY- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E  V  +   + +  ++L +       +  Y  +        + L+         
Sbjct: 92  ----IEATVIGDHSALRLCGLYLPNGNPAPGPKYDYKLA------WMERLQARAEALLAL 141

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
             PF++AGD+N                           ++ I        F        +
Sbjct: 142 EEPFLMAGDYNIIPQDEDAKRPEAWREDALALPQSRAAYRRIVNLGLTEAFRARTQGPGH 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             ID+F++       L            D     G + SDH PI
Sbjct: 202 YTFWDYQAGAWNRDDGIRIDHFLLSPQCADRLTDCQI-------DKHVRGGDKPSDHVPI 254

Query: 299 SIDYD 303
            I  D
Sbjct: 255 WITLD 259


>gi|184216050|gb|ACC77471.1| putative large secreted protein [Streptomyces rimosus]
          Length = 581

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/329 (11%), Positives = 84/329 (25%), Gaps = 71/329 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN 78
           A ++ + ++N+  LS +              + +  L +         D+V L+E+   N
Sbjct: 275 ADELAVATYNVENLSPKTP-----------PAKFARLAEALVKNLASPDVVALEEVQDDN 323

Query: 79  ------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                                K     ++      + + N        +I T        
Sbjct: 324 GPTNDGTVSADATLKQLTDAVKAAGGPSYAW-RQIDPVNNQDGGQPGGNIRTVFLFNPAR 382

Query: 121 VRVLQ---------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
           V                          + P      + + A +R+ +       G+ ++V
Sbjct: 383 VSFTDVAGGDATTPVKVTGSPGKPRLSASPGRIDPGNAAWANSRKPLVGQFCFRGRPVFV 442

Query: 160 LDIHLKSFCFLDSLENTYSPSCSL----LSQQAQWLKDWITQ--KKESLVPFVIAGDFNR 213
           +  H  S      L++ + P          QQAQ +  ++    + +     V+AGD N 
Sbjct: 443 VANHFNSKGGDQGLDSRFQPPARTSETQRVQQAQAVHAFVEDVLRVDPKADVVVAGDLND 502

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                                    +             N   +D+ +  ++        
Sbjct: 503 FQFSP----ALKTLTAGGVLTDLVDRLPRGERYGYVYQGNSQVLDHMLTSRHLR------ 552

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                            + SDH P  +  
Sbjct: 553 --RVDYDIVHINAEYADQSSDHDPQVLRL 579


>gi|91784274|ref|YP_559480.1| exodeoxyribonuclease III [Burkholderia xenovorans LB400]
 gi|91688228|gb|ABE31428.1| Exodeoxyribonuclease III [Burkholderia xenovorans LB400]
          Length = 258

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/302 (9%), Positives = 82/302 (27%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  + +    D++ LQE          
Sbjct: 1   MKIATWNVNSL----------------KVRQQHVIDWLETSGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  + +  +    + +S  +      F     R
Sbjct: 35  LKLPDEKFPRAELEEKGYRSWFAGQKTYNGVGILVRGGLTVDESSIVRNIP-GFEDPQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++     + ++  +  +     + +  Y        +    L DWI  +     
Sbjct: 94  -VIAATID----GVRIISAYFPNGQAPGTDKFAYK------LRWLAALHDWIASEMALHP 142

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
              + GD+N        +D      + +   +            L+   ++ +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAFVQLIGLGLVDAFRQFEQPEKIYS 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++ +   +              D +  +  + SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSKALAEICSSCEV-------DKVPRKWDQPSDHAPVVA 255

Query: 301 DY 302
             
Sbjct: 256 QL 257


>gi|291448720|ref|ZP_06588110.1| large secreted protein [Streptomyces roseosporus NRRL 15998]
 gi|291351667|gb|EFE78571.1| large secreted protein [Streptomyces roseosporus NRRL 15998]
          Length = 645

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 77/327 (23%), Gaps = 69/327 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79
            ++ + ++N+  L   +             + +  L +         DIV L+E+   N 
Sbjct: 334 DELAVATYNVENLDAGDD-----------QAKFDTLAEGVAVNLSSPDIVSLEEIQDDNG 382

Query: 80  V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                             A V        +       N    +   +I        K V 
Sbjct: 383 AVNDGTTGSEATLKRFTDAVVAKGGPRYAWRYIAPENNKDGGEPGGNIRNVFLYNPKRVS 442

Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
              +                       P     +S + A +R+ +       GK ++V+ 
Sbjct: 443 FTDRPGGDATTPVRAVDTWLGVKLSASPGRINPESPAWADSRKPLVGEFVFRGKPVFVIG 502

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            H  S      L   Y      S +   QQA  +  ++    K +     V  GDFN   
Sbjct: 503 NHFASKGGDQPLHGRYQEPTRSSETKRIQQAAEVNTFVASLLKADKSAQVVALGDFNDFE 562

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                                          +     N   +D+ +              
Sbjct: 563 FSPT----MKALTKGKALKPLISTLPVGERYSYVFDGNSQTLDHILTSPGVR-------- 610

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                          + SDH P  +  
Sbjct: 611 RLDYDVVHINAEFADQASDHDPQVVRI 637


>gi|239945254|ref|ZP_04697191.1| putative endonuclease/exonuclease/phosphatase family protein
           [Streptomyces roseosporus NRRL 15998]
 gi|239991716|ref|ZP_04712380.1| putative endonuclease/exonuclease/phosphatase family protein
           [Streptomyces roseosporus NRRL 11379]
          Length = 803

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 77/327 (23%), Gaps = 69/327 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79
            ++ + ++N+  L   +             + +  L +         DIV L+E+   N 
Sbjct: 492 DELAVATYNVENLDAGDD-----------QAKFDTLAEGVAVNLSSPDIVSLEEIQDDNG 540

Query: 80  V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                             A V        +       N    +   +I        K V 
Sbjct: 541 AVNDGTTGSEATLKRFTDAVVAKGGPRYAWRYIAPENNKDGGEPGGNIRNVFLYNPKRVS 600

Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
              +                       P     +S + A +R+ +       GK ++V+ 
Sbjct: 601 FTDRPGGDATTPVRAVDTWLGVKLSASPGRINPESPAWADSRKPLVGEFVFRGKPVFVIG 660

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            H  S      L   Y      S +   QQA  +  ++    K +     V  GDFN   
Sbjct: 661 NHFASKGGDQPLHGRYQEPTRSSETKRIQQAAEVNTFVASLLKADKSAQVVALGDFNDFE 720

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                                          +     N   +D+ +              
Sbjct: 721 FSPT----MKALTKGKALKPLISTLPVGERYSYVFDGNSQTLDHILTSPGVR-------- 768

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                          + SDH P  +  
Sbjct: 769 RLDYDVVHINAEFADQASDHDPQVVRI 795


>gi|89055881|ref|YP_511332.1| endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1]
 gi|88865430|gb|ABD56307.1| Endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1]
          Length = 337

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/333 (12%), Positives = 94/333 (28%), Gaps = 53/333 (15%)

Query: 23  KVRLVSWNINTLS----EQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEM 74
           K+R  ++N+        ++  +        R     T+    L +  + +DAD V + E 
Sbjct: 4   KLRFATYNVEWFFKLFDDEGRLLRDDGWSGRWNVTRTAQIDALARVFRAMDADAVLVVEA 63

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------- 127
              +              ++  R         N      + +   +V   +         
Sbjct: 64  PDTSRGRDGAVALRSFAAHAGLRAREVLAGFPNETQQELMLLYDPDVITARHDPLEAGAP 123

Query: 128 -------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--S 178
                    L           ++  +E  +E     + ++  H+KS     ++ +     
Sbjct: 124 QFDAEFAIDLDIDATEDLVRFSKPPLEAALETPVGPLRLIGAHVKSKAPHGAVTDADVMR 183

Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---------- 225
            + +   +Q      L+  +    ++    ++AGD N           F           
Sbjct: 184 IAIANRRKQLAQCIWLRRRVEAHLDAGDALIVAGDLNDGPGLDEYEALFGRSGLEIILGT 243

Query: 226 ------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQES 274
                 +  DP+ +     K   +   A    R++       +DY ++         +  
Sbjct: 244 AGVAERRLFDPHAAQALQSKLSATPTTARFFKRHENRYLQALLDYVMVSPALRLRADRWH 303

Query: 275 FSEILYNEDDIKSRGKR-----LSDHCPISIDY 302
                 + D       R      SDH P+S+D 
Sbjct: 304 IWHPFDDPDCWGQTDLREALLTASDHFPVSLDL 336


>gi|1185049|gb|AAB39273.1| nuclease [Aeromonas hydrophila]
          Length = 1070

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/367 (10%), Positives = 88/367 (23%), Gaps = 84/367 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQE-GVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70
           + A  +R+ S+N+        G      +  R            T +      L+AD+V 
Sbjct: 472 AAAGDLRVASFNVLNFFTTVVGGDANPTNSNRGALTVGEFELQRTKIVSAITRLNADVVG 531

Query: 71  LQEMGSYN------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           L E+                A+    P       +              + I   +  R 
Sbjct: 532 LMEIEDNGYGNNSAIANLVGALNAALPDEQDHYAFVHSPDDQPMGT---DAITVGLIYRP 588

Query: 119 KNVRVLQQSYPLL-----------GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
             V +   +  +              K    R G R ++          + +  +     
Sbjct: 589 AKVSLEGAAQLIPLPLQVAEAVDGADKPVSIRQGMRDSLLQRFTSPKGDVPLTLVVNHLK 648

Query: 168 CFLDSLENTYSPSC------------SLLSQQAQWLKDWITQKKES------------LV 203
               +    Y                +L    A+ L + + Q+                 
Sbjct: 649 SKGSACYEDYPDYVTADPLDGQGHCNALRVSAAKVLGERLKQEPGDLLVIGDLNAYGLED 708

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTI-------------DPNDSLIRFPKEKDSRCNANKN 250
           P  +  D++            +  +                  +    +   +   +   
Sbjct: 709 PVRVLTDYDPAAQSRQIMSAAFTQLAGQPYEEQATAMGKGAGLINLNTQFHGTDTYSYSY 768

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------------LSDHCP 297
                 +D+ + + +  K ++      I   E +    GK+              SDH P
Sbjct: 769 EGELGNLDHALANPSLAKKVVGIEDWHINSAESNFFEYGKKYSGQLGKSEGPFSASDHDP 828

Query: 298 ISIDYDF 304
           + +   +
Sbjct: 829 VLVAIQY 835


>gi|72160551|ref|YP_288208.1| metal-dependent hydrolase [Thermobifida fusca YX]
 gi|71914283|gb|AAZ54185.1| similar to Metal-dependent hydrolase [Thermobifida fusca YX]
          Length = 673

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 86/292 (29%), Gaps = 47/292 (16%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F          ++R+V++NI                   T D   + +  +    D+V L
Sbjct: 418 FSDTTRTPAGNELRVVAYNIRM-----------GYGLTGTYDIEGIAETIQRAQPDVVLL 466

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            E+     +                + +       +N      AV  +   V    YPL 
Sbjct: 467 NEVDRGWFLTGGQDTLGTLARMLDMQAVF----APSNGQLWGDAVLTRLPIVETVGYPLR 522

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           G   +        A+ ++V+    +I V+  HL+S    +  E          + QA  L
Sbjct: 523 GYGSTTGAQ----ALAVVVKYETTEIEVIATHLQSPGTEEGEEPKEP------TLQAADL 572

Query: 192 KD-WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
            D  I ++     P ++ GDFN        N   W+ ++         + + S      +
Sbjct: 573 ADIIIKRRSAHGRPVIVGGDFNF-----ERNGAAWREMERAGLYDALFRVRPSPTFPADD 627

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +  +D+        +         +  +           SDH  +    
Sbjct: 628 PDKE--LDHIFATAGLVREQGA----VLPAS----------YSDHVAVMAVL 663


>gi|53724173|ref|YP_103357.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344]
 gi|121601562|ref|YP_993558.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1]
 gi|124384052|ref|YP_001029013.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229]
 gi|126440535|ref|YP_001059656.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668]
 gi|126449755|ref|YP_001081066.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247]
 gi|126452052|ref|YP_001066939.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a]
 gi|134277971|ref|ZP_01764686.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305]
 gi|167003440|ref|ZP_02269226.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20]
 gi|167720390|ref|ZP_02403626.1| exodeoxyribonuclease III [Burkholderia pseudomallei DM98]
 gi|167739381|ref|ZP_02412155.1| exodeoxyribonuclease III [Burkholderia pseudomallei 14]
 gi|167816592|ref|ZP_02448272.1| exodeoxyribonuclease III [Burkholderia pseudomallei 91]
 gi|167846507|ref|ZP_02472015.1| exodeoxyribonuclease III [Burkholderia pseudomallei B7210]
 gi|167895086|ref|ZP_02482488.1| exodeoxyribonuclease III [Burkholderia pseudomallei 7894]
 gi|167903470|ref|ZP_02490675.1| exodeoxyribonuclease III [Burkholderia pseudomallei NCTC 13177]
 gi|167911721|ref|ZP_02498812.1| exodeoxyribonuclease III [Burkholderia pseudomallei 112]
 gi|167919720|ref|ZP_02506811.1| exodeoxyribonuclease III [Burkholderia pseudomallei BCC215]
 gi|217421040|ref|ZP_03452545.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576]
 gi|237813050|ref|YP_002897501.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346]
 gi|242317870|ref|ZP_04816886.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b]
 gi|254178518|ref|ZP_04885173.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399]
 gi|254184341|ref|ZP_04890931.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655]
 gi|254191371|ref|ZP_04897875.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237]
 gi|254195861|ref|ZP_04902287.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13]
 gi|254261312|ref|ZP_04952366.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a]
 gi|254297001|ref|ZP_04964454.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e]
 gi|254357938|ref|ZP_04974211.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280]
 gi|52427596|gb|AAU48189.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344]
 gi|121230372|gb|ABM52890.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1]
 gi|124292072|gb|ABN01341.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229]
 gi|126220028|gb|ABN83534.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668]
 gi|126225694|gb|ABN89234.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a]
 gi|126242625|gb|ABO05718.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247]
 gi|134251621|gb|EBA51700.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305]
 gi|148027065|gb|EDK85086.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280]
 gi|157807529|gb|EDO84699.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e]
 gi|157939043|gb|EDO94713.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237]
 gi|160699557|gb|EDP89527.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399]
 gi|169652606|gb|EDS85299.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13]
 gi|184214872|gb|EDU11915.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655]
 gi|217396452|gb|EEC36469.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576]
 gi|237503790|gb|ACQ96108.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346]
 gi|242141109|gb|EES27511.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b]
 gi|243061042|gb|EES43228.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20]
 gi|254220001|gb|EET09385.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a]
          Length = 258

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L+                     +  +    D D++ LQE          
Sbjct: 1   MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    +    +  +A+  +       S P        +  G  
Sbjct: 35  LKIPDEKFPREALEAAGYRSWFAGQKTYNGVAILAR------ASLPFDETDIVRNIPGFE 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A + L+      + ++  +  +   LDS +  Y        Q    L+ W+  + +   
Sbjct: 89  DAQQRLIAATIDGVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLKDELQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++     +     +        D +    ++ SDH P+  
Sbjct: 203 WWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPRTWEQPSDHTPVVA 255

Query: 301 DY 302
             
Sbjct: 256 QL 257


>gi|307727145|ref|YP_003910358.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
 gi|307587670|gb|ADN61067.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
          Length = 290

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 84/313 (26%), Gaps = 58/313 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RLV WNI      +G             D   + + A+ L D DI+ +QE+        
Sbjct: 1   MRLVDWNIQWGRGVDG-----------RVDLARIVREARALCDFDIMCMQEVTRGFHESP 49

Query: 75  --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                      +  A++                       +       A+  +       
Sbjct: 50  SAGGLAGGPGADQFAELAALLPGMTVIDATGSDLPPIGTGSRRRQFGNAIVTRLPVRQVL 109

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            + L    D    +  R A+E +++ +   + V+  HL+ +   ++           L +
Sbjct: 110 RHSLPWPADPAKPSMLRVALEAVIDTDVGPLRVISTHLEFYS--ETQRLAQVERLRELHR 167

Query: 187 QAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           +A        + ++   PF         ++ GDFN                D       +
Sbjct: 168 EACDHARRPARAEKQDSPFADTGRPMSAIVCGDFNSAFQGAAYRKMLEPIADAPAFADAW 227

Query: 238 PKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +                          D+  + ++    +                   
Sbjct: 228 TRAHGDSAREPTVGLYDKEQWPDGPFACDFIFVTEDLAPRVASCEV-----------DPH 276

Query: 290 KRLSDHCPISIDY 302
            R SDH P+ ++ 
Sbjct: 277 SRSSDHQPMWLEL 289


>gi|288928925|ref|ZP_06422771.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288329909|gb|EFC68494.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 298

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 84/291 (28%), Gaps = 44/291 (15%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
           A     VR++++N            + +             +  K L+ D+V +QE+ S 
Sbjct: 48  AKAEGNVRIMTYNCFYCKSNTSNKTFSD------EHTADFAKVIKALNPDVVVIQELDSG 101

Query: 77  --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               A   +            +     +   S   I   +  ++       +   L G  
Sbjct: 102 TTERAKRYLLDDIRRATGLDYDLFFGSAAPYSEGKIGPGVLYKRAMQPTSIKKVALPG-- 159

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  + L       +  +L  HL      D        S  +++ +   L   
Sbjct: 160 -----KETRALMVLTFP----RFTLLGTHL------DLDATARKTSAEIVNHELTTLA-- 202

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                    P   AGD N   ++      F         +I    +  +        +  
Sbjct: 203 -------TQPVFFAGDLNDSPSWKPELTAF--------PIITKAFDIITPQTGTSVDQPN 247

Query: 255 IPIDYFVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             IDY ++D+     + + ++        +   +    +SDH P+ +D  F
Sbjct: 248 ETIDYILVDKAHKGAVKVVQTAVVKQLEINGKVTETGTISDHFPVFVDVRF 298


>gi|262382529|ref|ZP_06075666.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295407|gb|EEY83338.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 365

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 95/334 (28%), Gaps = 78/334 (23%)

Query: 4   KYVLALVFFLVPCTASV--------------AQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           K++L  +F  + C   V               + ++++++N+     +    +  N    
Sbjct: 68  KFLLIGIFSFLLCWGPVKRYFPFHSHKDVPREEVLKVLTYNVMAFGYKNHTKIAPN---- 123

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  + QY  N DADIV LQE  +  +   +     +    S     +   + S   
Sbjct: 124 ------KIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDA-LSMYPYRSVFYQSSTKF 176

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               IAV  K      +        +         +    V I GKK+ +++ HL+SF  
Sbjct: 177 QSFGIAVFSKYPLSNSRMVKYDSDYN--------GSSVHEVNIKGKKLTLINNHLESFKL 228

Query: 170 LDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFV 206
                  YS                       P+  + ++QA+ + + I          +
Sbjct: 229 TMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKN--AKGEYVL 286

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GDFN       +           D    F +                 ID  +   N 
Sbjct: 287 VCGDFNDTPISYAHRTI------QGDLTDAFAESGRGMGITYNQNFFWFRIDNILHSPNM 340

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                            +        SDH P+  
Sbjct: 341 TSM--------------NCSVDKVAYSDHYPLWC 360


>gi|306843285|ref|ZP_07475893.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           BO2]
 gi|306286516|gb|EFM58102.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           BO2]
          Length = 369

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 97/366 (26%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S ++N                +  R       +          
Sbjct: 2   FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 62  ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        S+  L   D                 R   R  + + + I G+ +
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQLELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213
            +   HLKS     +  +  + S  +   +A+ ++  I +K      +   ++I GDFN 
Sbjct: 182 SLFVAHLKSMSGARNGLDGRASSHPVRLAEARAIRRIIEEKFGIDRVAERRWLICGDFND 241

Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +                  
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +DY +                      +       + +           + SDHCP
Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           +S+  +
Sbjct: 362 VSVTLN 367


>gi|114571487|ref|YP_758167.1| exodeoxyribonuclease III [Maricaulis maris MCS10]
 gi|114341949|gb|ABI67229.1| exodeoxyribonuclease III [Maricaulis maris MCS10]
          Length = 270

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/306 (10%), Positives = 80/306 (26%), Gaps = 65/306 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + L SWNIN                       L+  + +  D D++ LQE+     + +
Sbjct: 2   TLTLASWNIN---------------SVRLRAVPLIADWVQEADPDVLCLQEI---KCLEE 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP+  +        +               +A+  K          L    ++  +   
Sbjct: 44  QFPEEAFR------EMGFRHFHVRGQKGMHGVAIASKYPLEDLGDVELCPRGEARHQ--- 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                    +  + I + + ++ +    D  +   +P  +   +    ++ +   +    
Sbjct: 95  --------RVGVEGIELHNFYIPAG--GDEPDPAINPRFAHKLEFLDRIERYFAGRASEN 144

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              V+ GDFN                   +     +   +            +       
Sbjct: 145 AALVLVGDFNIAPYEHDVWSHKQLLKVVSHTPVEVEALERIRQAGQFSDVARELIPMDEK 204

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+      A    +        +   + +   ++ SDH 
Sbjct: 205 IYTWWSYRAKDWRAANRGRRLDHIWASPAARDRALAGG--RDAFRIWEDERSREKPSDHA 262

Query: 297 PISIDY 302
           P+++  
Sbjct: 263 PVALTL 268


>gi|88811277|ref|ZP_01126533.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231]
 gi|88791816|gb|EAR22927.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231]
          Length = 280

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 56/288 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMGS 76
           +RL+++NI T  E      +     R         S+   +       D DIV LQE+ +
Sbjct: 32  LRLMTYNIQTGIETRFYHHYITRSWRHLLPDNNRLSNLDRIGGLIA--DFDIVGLQEIDA 89

Query: 77  YNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +  +    +  +             + R        +  V  +   +  +++ L G   
Sbjct: 90  GSLRSGFINQAAYLAQRGGFPFWHFQTNRRIGRLARHSNGVLSRFRPLEVRNHRLPG--- 146

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A+ L      + + V+ +HL                     +Q  ++ + +
Sbjct: 147 ---MIPGRGALHLRFGGPAEGLDVVLLHLALGQ-------------RTRLRQLAYVAELV 190

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                     ++ GD N  ++     D   K  D  + +           +   + R   
Sbjct: 191 NAC----RHVIVMGDLNC-LSRSVEFDYLDKHTDLCEPIH--------NLHTYPSWRPHR 237

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ID+ ++                       ++    LSDH P+ ++ +
Sbjct: 238 NIDHILVSPTLQVR--------------SAEALNYPLSDHLPVIMEVE 271


>gi|260365545|ref|ZP_05778082.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           K5030]
 gi|260877608|ref|ZP_05889963.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AN-5034]
 gi|260895379|ref|ZP_05903875.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           Peru-466]
 gi|260901651|ref|ZP_05910046.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ4037]
 gi|308085255|gb|EFO34950.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           Peru-466]
 gi|308090661|gb|EFO40356.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AN-5034]
 gi|308108913|gb|EFO46453.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ4037]
 gi|308114359|gb|EFO51899.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           K5030]
          Length = 317

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 102/314 (32%), Gaps = 30/314 (9%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           S   ++  V+ N+                 S ++        +   + L+ DI+ LQE+ 
Sbjct: 2   SQPSRITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGLQEVF 61

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLG 132
           S       F    +  +++T            +    AIA R     V +  +    L  
Sbjct: 62  SIEETRAYFLSLGFP-YFATVDTPKIEDEYIYSRPVVAIASRFPIEDVKRVEFDSNSLTP 120

Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLL 184
              + +   +R+ +   +V      I +   HLKS    D       S       S    
Sbjct: 121 FGVNEAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTETPEPSSRVMARWLSTQQR 180

Query: 185 SQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             +A  L+D +  Q +   +P V+ GD N+ I+    N+   +T   + + ++     + 
Sbjct: 181 GWEAAMLRDAMQAQYRAHPIPTVLMGDMNQPISKESVNNVLTETFSDSVTELQLKDGWNL 240

Query: 244 RCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289
           +           + +      +DY ++ Q             I Y   +         + 
Sbjct: 241 QTGSSLEVRPATHYHFSTGNVLDYILLSQEFDTHSDISVAEVIDYQVLEQHLINPSYEKD 300

Query: 290 KRLSDHCPISIDYD 303
           K  SDH  +S+  +
Sbjct: 301 KNASDHAFVSLTVE 314


>gi|291298430|ref|YP_003509708.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290567650|gb|ADD40615.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 289

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 77/285 (27%), Gaps = 52/285 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R  S+NI+  +  + V            D   + +  + L+ D++ LQE+  +   +  
Sbjct: 51  LRAASFNIHHGASPDDVL-----------DLERIARRIEALNVDVIGLQEVDRFWKRSDH 99

Query: 84  FPKNTWC-----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             +  W      +  +           +        A+  +      ++  L    D   
Sbjct: 100 VDQPAWLSRRLGLHVAFGLNELRRSDGAGRRREYGTAILSRWPIRETRNVALPRWDDHAR 159

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R      +++ G  +     HL      +                           
Sbjct: 160 HGLLR----TEIDMPGGSLSFATTHLIHAHHDEERAAQAKAVAKQF-------------- 201

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            +     V+ GDFN + N         +  D              +  +  + + K  ID
Sbjct: 202 ADDARRSVVVGDFNDEPNTPAIAAMTRRFTDAWAVA------GSGKGYSYSSTKPKRRID 255

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y    ++                   +     R SDH PI  +++
Sbjct: 256 YVFGSEDLEPRA------------MTVDDTDPRASDHLPILTEFE 288


>gi|126736755|ref|ZP_01752493.1| extracellular nuclease [Roseobacter sp. CCS2]
 gi|126713726|gb|EBA10599.1| extracellular nuclease [Roseobacter sp. CCS2]
          Length = 1132

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 87/332 (26%), Gaps = 53/332 (15%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
               ++ S N+              +        +S++        L      +DA ++ 
Sbjct: 633 GGNFKVASLNVLNYFTTIDEPGVTTDNGSDPRGADSLEEFERQADKLVNAIVAIDAAVLG 692

Query: 71  LQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV--- 121
           L E+ +  A     +  +  +    +       ++  +     D I   +  +   V   
Sbjct: 693 LVEIENDFAGDTFAIKDIVDRVNAELGSEVYAFVDPGQEFVGGDAISNGLIYKVDEVGLN 752

Query: 122 ----RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF------ 169
                +               R  NR A+    E    G+ I V   H KS         
Sbjct: 753 GDMAILETFEGRDFIDPLDAGRGLNRPAIAQTFEDLDTGQTITVSVNHFKSKGSLSGLEA 812

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKT 227
            ++  +    + +  ++ A  L  W+            +I GD N               
Sbjct: 813 DEAQGDGQGNNNATRTEAADILAAWLNSDPTGQGSENTLILGDLNAYAKEDP-----LTV 867

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +           E      +         +DY + +      ++  +   I  +E D   
Sbjct: 868 LADAGFTDLAAAELGDAAYSFVFDGQIGTLDYALANDALADNVVGVTEWHINADEADALD 927

Query: 288 RG---------------KRLSDHCPISIDYDF 304
                             R SDH P+ + + F
Sbjct: 928 YNLDFGRDPALFDGDSPNRNSDHDPVIVSFQF 959


>gi|308049374|ref|YP_003912940.1| endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM
           9799]
 gi|307631564|gb|ADN75866.1| Endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM
           9799]
          Length = 319

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 87/314 (27%), Gaps = 36/314 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             + ++N+    E         +     +        R     +  DI+  QE+ S   +
Sbjct: 5   FSIATFNLFNFVEPPLAYYDAENIYDATQWQRKCDWTRDRLIEMAPDIIGFQEVFSAAPL 64

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPLLGAKDSF 137
           A +       + +         +         A+A R   V    V      +     + 
Sbjct: 65  AAL--CEAQGLSHWALAPGQEEQDFIRRKPRVALASRYPIVETATVQPNPELVKALGLAQ 122

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLD---------SLENTYSPSCSLLSQQ 187
               +R+ ++  + + G   + V+ +HLKS                E     +  +L + 
Sbjct: 123 PFHFSRQPLKARLHVPGFSDVRVIVVHLKSPRAAWQPGERPLIADEELDQRVATPVLGRW 182

Query: 188 AQWLK----------DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLI 235
           A  L+          D + ++    +P VI GDFN  +             D        
Sbjct: 183 ASALQRSAEAAMLCLDLMNEQLRDPLPSVILGDFNGDLGSDLLTLLQGGEEDAYRLQDAH 242

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289
                +  R   +    N   +D+ ++         Q           D         + 
Sbjct: 243 DLALYQGDRDPTHYWGANGSVLDHILLSAQFNAGFGQSLAQVDEVVVWDRHLRFNDAEQD 302

Query: 290 KRLSDHCPISIDYD 303
           +  SDH P+     
Sbjct: 303 RMASDHAPVLARIS 316


>gi|254573632|ref|XP_002493925.1| Component of the CCR4-NOT transcriptional complex [Pichia pastoris
           GS115]
 gi|238033724|emb|CAY71746.1| Component of the CCR4-NOT transcriptional complex [Pichia pastoris
           GS115]
          Length = 768

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 92/324 (28%), Gaps = 43/324 (13%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76
               ++++N      + ++      +           L++   +L  DI+ LQE+     
Sbjct: 423 NTFTMMTYNTLCQHYATKKMYRYTPSWALDWDYRRERLKEQILDLQTDIICLQEVEHKTF 482

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +    +   + +   +  +      K  S       A   R    + +++ +   G   
Sbjct: 483 DDFWQPIMLSHGYKGIFHVKSRAKTMKESSAYKVDGCATFYRTSKFQAVERKHFEYGRIA 542

Query: 136 SFSRAGNRR---------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  +                 + L    +G K+ V + HL      +         
Sbjct: 543 MSQDKFKKTEDLFNRFLNKDNIASVLILEHIPSGNKLVVANTHLHWDPEFND--VKTMQV 600

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             LL +    ++  ++ K  + VP +I GDFN K++          T+D ++ +I     
Sbjct: 601 GVLLDELQAVIRKHLSPKDITKVPLLICGDFNSKVHSAVYQLFSQGTVDKHEDIIGRDYG 660

Query: 241 KDSRC-------------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILY 280
           K +                       N +      IDY      +     +         
Sbjct: 661 KFTEEGFRHPFHLQSSYDSIGELPYTNVSPTFTDVIDYIWYSTPSLSVKGVLGQVDPDYS 720

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
                       SDH P+   + F
Sbjct: 721 KNIIGFPNADFPSDHIPLLSTFMF 744


>gi|83409938|emb|CAI64359.1| conserved hypothetical protein [uncultured archaeon]
          Length = 347

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/334 (11%), Positives = 99/334 (29%), Gaps = 60/334 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           + K+R+ ++N+  L +                   ++R     L+ADI+ LQE+      
Sbjct: 21  STKLRIATFNLENLDD------KPRQTPTLDERIAVMRPQLVRLNADILCLQEVNGQEKT 74

Query: 79  -------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                  A+ K+     +  +++   +         ++ +  + +  +   V    Y   
Sbjct: 75  GQPRRLLALEKLVEGTPYVEYHTVSTMTA-DGTQVYDERN--LVILSRYEIVEHHQYKHD 131

Query: 132 GAKDSFSR--------------AGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
            A   + +                 R      ++++  +   V+++HLKS    +     
Sbjct: 132 HAPAPWYQKVTAEPQEEEAKEVKWERPIQHAKIKLDQNRFFQVINLHLKSRLPSNIEGQK 191

Query: 177 YSP---------------SCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLG 219
            +                S      QA   +  I +  +       V+ GDFN + + + 
Sbjct: 192 LNTFTWKTACGWAEGFFVSSMKRVGQALETRMLIDKLFDEDEDALIVVCGDFNAESDEVP 251

Query: 220 NNDDFWKT-------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                          +     +       +S   +   +     ID+ ++ ++   +   
Sbjct: 252 VEAIRGDVENTGNGKLARRALVPCERTIPESSRFSMLYIGQGRMIDHLLVSRSLLPYYTG 311

Query: 273 ESFSE---ILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +      +    SDH P+   ++
Sbjct: 312 SEIHNELLHDESIAFATDKKYPESDHAPVIAKFE 345


>gi|302525892|ref|ZP_07278234.1| exodeoxyribonuclease III [Streptomyces sp. AA4]
 gi|302434787|gb|EFL06603.1| exodeoxyribonuclease III [Streptomyces sp. AA4]
          Length = 265

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 80/305 (26%), Gaps = 70/305 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            VR+ +WN+N                        +  +  N   D++ LQE+ +      
Sbjct: 2   TVRVATWNVN----------------SIVPRLPRVLDWLDNTAPDVLCLQELKNTTEA-- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                             +            +A+  K          L G      +A  
Sbjct: 44  --------FPADEIVARGYEVAAYGLGRWNGVAILSKIGLDDVVRG-LPGEPGFDGKAEA 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +      I V  +++ +     +    Y        +  + L D + ++    
Sbjct: 95  RA-----IGATCGGIRVWSVYVPNGREPQNPHYAYK------LEWFEKLSDLVGEELRHA 143

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            PF + GDFN                            K +        FP+      + 
Sbjct: 144 RPFAVLGDFNVAPTDEDVWDISVFAESTHVTEPERAALKKLRDAGLSDVFPRPLKYD-HP 202

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +         + ID  V     +   + +S+       D    +GK  SDH PI
Sbjct: 203 FTYWDYRAGNFPNNKGMRID-LVYGNEVFAKAVTDSY------VDREARKGKGPSDHAPI 255

Query: 299 SIDYD 303
            +D +
Sbjct: 256 VVDLE 260


>gi|224823708|ref|ZP_03696817.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002]
 gi|224604163|gb|EEG10337.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002]
          Length = 257

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 77/302 (25%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N+L                      + Q+      D++ LQE          
Sbjct: 1   MRLATWNVNSL----------------KVRLPQVLQWLAETPVDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +      +         +  +A+          S   +           R
Sbjct: 35  LKMDQDAFPLAEIEAAGYRAAWLGQKTYNGVAIL----VRDGHSLDDVVPGIPGYDDEQR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V+  +  +   +DS +  Y  +          L+ ++  +     
Sbjct: 91  RVIAATV----GGVRVICAYFVNGEAVDSPKYPYKLA------WLAELERYVADELTRHP 140

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
              + GD+N   +     D      K +                L    +  +       
Sbjct: 141 SLALLGDYNIAPDDRDVYDPDAWKDKVLCSVPERDAFRRLIGLGLSDSFRLFNQDEKQYS 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++         +          D    + +R SDH P+ +
Sbjct: 201 WWDYRAMMFRRNLGLRIDHILISDALKARATECVI-------DKAPRKWERPSDHTPVVL 253

Query: 301 DY 302
             
Sbjct: 254 TL 255


>gi|330837418|ref|YP_004412059.1| Endonuclease/exonuclease/phosphatase [Spirochaeta coccoides DSM
           17374]
 gi|329749321|gb|AEC02677.1| Endonuclease/exonuclease/phosphatase [Spirochaeta coccoides DSM
           17374]
          Length = 372

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 97/360 (26%), Gaps = 76/360 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQ------KVRLVSWNINTL---SEQEGVSLWKNSVKRTTS 52
           I  +V+ L+  +  C+  V +       V ++SWN+  L                 R   
Sbjct: 6   ISIHVILLMCIVSLCSCPVGEGEAAPTDVTILSWNVQNLMDGRTSGTEYEEYGPSSRWDE 65

Query: 53  -----DYTLLRQYAKNL---DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
                    +R+   +    DADI+ LQE+ +   VA +         Y           
Sbjct: 66  TAYHLRLEDIRKVLSSRIFPDADIIVLQEVENSGVVADLIAGPLARRGYRWYAAAGQEGG 125

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
                I TAI  R   VR+  Q              G R A+E +  ++G  + V  +H 
Sbjct: 126 A----ICTAIISRLNPVRITVQGV-----------EGFRPALEAVFNVHGGTVVVWAVHA 170

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-GNNDD 223
           KS    D +      + + L      L      + +     VIAGD N       G    
Sbjct: 171 KSRKEGDRVTEEGRRALASLLSTRARLWR----QADPGCLLVIAGDMNEDPGEEKGMERG 226

Query: 224 FWKTIDPNDSLIRFPKEKDS---------------------------RCNANKNLRNKIP 256
           +   +    S      E                              R  +         
Sbjct: 227 YRTALVRAASSHAREWEAAGSLVVSGMQGGQKGSWYSPWLDGRINTFRPGSYVYEGTWHR 286

Query: 257 IDYFVMDQ-------NAYKFLIQESFSEILYNEDDIKSRG-----KRLSDHCPISIDYDF 304
            D+ +                   +  +     D           +  SDH P+   + F
Sbjct: 287 YDHILFSGLAPADRAGWRMKEFGCNAPDSAVASDGTPRAWNVRLRRGTSDHFPVWGVFRF 346


>gi|284042535|ref|YP_003392875.1| exodeoxyribonuclease III Xth [Conexibacter woesei DSM 14684]
 gi|283946756|gb|ADB49500.1| exodeoxyribonuclease III Xth [Conexibacter woesei DSM 14684]
          Length = 262

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 85/302 (28%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RLV+WN+N+L                      + ++      D++ LQE  +  A    
Sbjct: 1   MRLVTWNVNSL----------------RVRLPRVLEFLAEHRPDVLCLQETKTDAAAFPH 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +       +           +A             P +G     ++  +R
Sbjct: 45  AELAAAGYVAADHSGGRWAGVAIVARTELGVA------------DPAVGLPGEPAQDESR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +    G ++ V  +++ +   L+S           L   A+ + +       + +
Sbjct: 93  WIEATV----GGELRVASVYVPNGRELESEWYAAK--LEFLDAMARRVGELRGDDAGAPL 146

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD N   + L   D                  + ++    L  + +         
Sbjct: 147 PLVVAGDMNVAPSDLDVYDPAVFATSTHTSAAERTALRAVEQAGLLDAYRQLHPDDV-GY 205

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID  +   +  + L +               +G R SDH P+ 
Sbjct: 206 TWWDYRQGHFHRGLGLRIDLILASPDLAERLTRVGIERDY-------RKGSRPSDHVPLV 258

Query: 300 ID 301
            D
Sbjct: 259 AD 260


>gi|262279680|ref|ZP_06057465.1| nuclease [Acinetobacter calcoaceticus RUH2202]
 gi|262260031|gb|EEY78764.1| nuclease [Acinetobacter calcoaceticus RUH2202]
          Length = 812

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 93/329 (28%), Gaps = 46/329 (13%)

Query: 15  PCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFL 71
                 A  +R+ S+N+ N  +   G    + +  +   D     +    K +DAD+  L
Sbjct: 455 SVLTKNANHIRVASFNVLNYDNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGL 514

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYP 129
            E+ +          +      S  + +      R   + I  AI    K V+ L +   
Sbjct: 515 MEIANNGYGPDSAIAHLTKALGSDWKYVVPENLDRLGGDAIAVAIIYNSKRVKPLNKPVV 574

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCS---- 182
           L    D   +     A         K   V+  HLKS        S  +           
Sbjct: 575 L----DLGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDASSTDADQKDGQGCWN 630

Query: 183 -LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
               +    +  W+ +          ++ GD N            ++  +    L     
Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVQKQNALLVGDMNSYAKEEPI--LSFEKANYKVLLNDAKI 688

Query: 240 EKDSRCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
            + ++  +                 +D+ + D   Y  +++     I  +E  +      
Sbjct: 689 GQGTQAYSYVYGVASDANGNGGAGNLDHAIADAALYPKVVRTFAWHINADEPTVLDYNEE 748

Query: 290 ---------------KRLSDHCPISIDYD 303
                           R SDH P+ +D D
Sbjct: 749 YKTDEQKALFYGEDAYRSSDHDPVIVDLD 777


>gi|158522340|ref|YP_001530210.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans
           Hxd3]
 gi|158511166|gb|ABW68133.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans
           Hxd3]
          Length = 248

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 83/287 (28%), Gaps = 61/287 (21%)

Query: 29  WNINTLSEQEGVSL-----WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77
           +NI   +   G        +    ++T   +  +  + ++ D D+V L E+         
Sbjct: 9   YNIRYGTGSGGWRFHAPVPFSGYFRKTQKAFPEIASFIRSCDPDMVGLVEVDGGSGRHNG 68

Query: 78  -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            N   +V  +  +   + T+   +   R          AV  ++  +  + +        
Sbjct: 69  INQARQVAEELGYHCVFQTKYKPSPFSRAIPIMGKQGNAVLARHDILGHRYHYFEKGIKR 128

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                    + + VE+    ++++ + L                     QQ   L   I 
Sbjct: 129 ---------LIIEVELEDVVLFLVHLSLHPG---------------HRQQQLAELGLLIR 164

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P ++ GDFN             + +    S         +      + R +  
Sbjct: 165 GV---GKPVIVGGDFNAFAGS--------RELAGFLSATGLVSANAANVRTFPSKRPRWE 213

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +DY    +                  +D+ +   R SDH P+  D+ 
Sbjct: 214 LDYIFHSRQVR--------------VNDMHAPSVRFSDHLPLVCDFT 246


>gi|148927710|ref|ZP_01811154.1| exodeoxyribonuclease III Xth [candidate division TM7 genomosp.
           GTL1]
 gi|147886940|gb|EDK72466.1| exodeoxyribonuclease III Xth [candidate division TM7 genomosp.
           GTL1]
          Length = 266

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 81/304 (26%), Gaps = 65/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N                R   +    +++ K  D DI+ LQE  +    A++
Sbjct: 1   MKIYSWNVNG--------------IRAVVNKGAFQKFVKEHDPDILCLQETKAERGQAEI 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +   +++     +S     +     +++       + + Y + G          R
Sbjct: 47  -DLPHYIENWNSAVKKGYSGTAIFSKTQ-PLSIINGFPEDIIKKYKVEGDVYGDPNKEGR 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                ++    +  +++ ++  +       L               + L+          
Sbjct: 105 -----VMAAEFEDFYIVTVYTPNSKRELTRLTLREKHWDPAFLAYVKQLEK--------T 151

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +  GD N                         + ++       +  F          
Sbjct: 152 KPVIFCGDLNVAHTEDDLARPDTNHGEHGFTDEEREGFQKFLDAGFVDTFRMFTPKGNGH 211

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++       +                      SDHCPI
Sbjct: 212 YTWWTHWANARARNVGWRIDYFLVSHALKSKVKSAKIH-----------ADVMGSDHCPI 260

Query: 299 SIDY 302
           SI+ 
Sbjct: 261 SIEL 264


>gi|126208451|ref|YP_001053676.1| exonuclease III [Actinobacillus pleuropneumoniae L20]
 gi|303251086|ref|ZP_07337272.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|303253573|ref|ZP_07339711.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|126097243|gb|ABN74071.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|302647493|gb|EFL77711.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|302650096|gb|EFL80266.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
          Length = 267

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 81/311 (26%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +   +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIIEKHQPDVLGLQEIKVADEDFPW 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     + +F+                 H  +A+  K   +  +        D+  R  
Sbjct: 45  DLVNHLGYHVFHH------------GQKGHYGVALLTKKEPLAVRKGFPTDNADAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + VL+       F      ++        +    L+ ++  +   
Sbjct: 91  ---MIMADIETEFGVLTVLN-----GYFPQGENRSHETKFPAKEKFYADLQHYLESELSP 142

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P VI GD N                          L    ++   +     +  F   
Sbjct: 143 ENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFLPEEREWLDRLYSYGLIDTFRAM 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +  +   +  ++          D      ++
Sbjct: 203 NPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAERCVETGI-------DLEIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH P+   +
Sbjct: 256 PSDHSPVWAVF 266


>gi|228473947|ref|ZP_04058688.1| endonuclease/exonuclease/phosphatase [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228274461|gb|EEK13302.1| endonuclease/exonuclease/phosphatase [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 343

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 77/290 (26%), Gaps = 53/290 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  +++ ++S+N+   +  +  S         T     +  + K     I+ LQE     
Sbjct: 97  TSPEQLSVMSFNVRLFNHYKWSS--------DTLLREKILTFVKEEHPKILALQEF---- 144

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                     +    S            +       A+      +   S       ++  
Sbjct: 145 ---------YYKEKESFPFYKYKKFIYKHKKDKIGQAILSDYPIINSGSLDFPHTGNN-- 193

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLSQQAQWLK 192
                  V   + +NG  + +  +H +SF   D+  +  +            + Q   ++
Sbjct: 194 ------GVYADIVVNGDTLRLYSLHFESFHIEDTDISQENSKRIFLKLPRRFAIQQAQVE 247

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
            +         P V+ GDFN            ++       +  F +             
Sbjct: 248 LFNAHADSCPYPIVVCGDFNNTAFSY-----LYQKFQDRGLVDSFEEAGSGFGRTYDFPY 302

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               IDY + D           F    +     +      SDH PI    
Sbjct: 303 FPFRIDYILADP---------YFKITSHKVYTGRDY----SDHFPIRATL 339


>gi|75765927|pdb|1ZWX|A Chain A, Crystal Structure Of Smcl
          Length = 301

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 91/300 (30%), Gaps = 33/300 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
               ++ S N+   S      ++ N  +   +D      Y K  + D+V L E    +A 
Sbjct: 8   PGNFKITSHNVYLFSRN----IYPNWGQMHRADLIAQADYMK--NNDVVILNEAFDTSAS 61

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLG 132
            ++         + T  +          + +          +AV  +   V +  +    
Sbjct: 62  HRLLNNLREMYPHQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVVSQWPIVEKSQHIFQR 121

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              +  R  N+    + +  NGK   ++  H ++    D    +   S ++ ++Q Q ++
Sbjct: 122 GGGA-DRLSNKGFAYVKIMKNGKPYHIIGTHTQA----DDSLISKDTSRAIRAEQMQEIQ 176

Query: 193 DWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--- 248
            +I  +         I GD N        +D   K ++ +       +        N   
Sbjct: 177 TFIAKKNIPKDEIIFIGGDLNVNYGTDEYHD-MLKLLNVSSPANFNGQMATWDPTTNSML 235

Query: 249 --KNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                +     +DY  ++    +     +      +         +       SDH P+ 
Sbjct: 236 KESYPKAAPEYLDYIFVENGHARPHSWHNKVLHTKSPQWSVKSWFKTYTYQDFSDHYPVV 295


>gi|86134970|ref|ZP_01053552.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
 gi|85821833|gb|EAQ42980.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
          Length = 351

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 89/351 (25%), Gaps = 59/351 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQK------VR-LVSWNINTLSEQEGVSLWKN--------- 45
           ++K +  LV   +      AQK      +R +  +N+  L +    +   +         
Sbjct: 1   MKKTLSFLVLLFIVAFTVQAQKKGKQYNIRTIAFYNLENLFDTINDTSINDEASPMMELK 60

Query: 46  --SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96
               +        L      + AD       ++ + E+ + + +  +             
Sbjct: 61  SNRSEVYWDKIDKLSSVIVQIGADKANTSPTLLGVSEVENLSVLEDLVKSKN---LAKKG 117

Query: 97  RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
             I H        I  AI  +K+  + +           +  +   R  + +   ++ + 
Sbjct: 118 YGIIHYDSPDKRGIDVAILYQKRYFKPVHHEVFNPNIYRNGYKVYTRDQLLVSGYLDDEL 177

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           I V+  H  S    ++         +    Q   +   I + K+     +  GDFN    
Sbjct: 178 IHVIVNHWPSRSGGEAKSRPLREKAA---YQNTKIIAQIRE-KDPNAKIITMGDFNDDPT 233

Query: 217 YLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-- 269
                +          +   D    +        N      N    D  ++         
Sbjct: 234 NSSFKEVLKTKSDKSEVGDLDIYNPYEDLHRRGFNTLGYRDNINLFDMILISSPLLDKGE 293

Query: 270 --------------------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                                 +  F    +            SDH P+ +
Sbjct: 294 KDFSDYKMFKAMIFNKRFLTNRKGQFKGYPFRSFSYGGYTGGYSDHYPVYM 344


>gi|209523548|ref|ZP_03272102.1| exodeoxyribonuclease III [Arthrospira maxima CS-328]
 gi|209495953|gb|EDZ96254.1| exodeoxyribonuclease III [Arthrospira maxima CS-328]
          Length = 263

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 93/304 (30%), Gaps = 68/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                RT  D   +  + +  D D++ LQE  +   +   
Sbjct: 1   MKIATWNVN--------------SIRTRQD--QVLSWLQGQDIDVLCLQETKVIDQDFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F +  + ++   ++  N            AI  R     V+    P+LGA        
Sbjct: 45  SPFEELGYHVYIYGQKAYN----------GVAIFSRLNIESVIMGFTPILGADQVGELDD 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +R +  +++     I ++++++ +   + S +  Y        Q    L D++ Q    
Sbjct: 95  QKRVIAGVID----DICIVNVYIPNGSSVGSDKYEYK------LQWLNRLGDYLQQMLIK 144

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
                I GDFN         +   +                  N  L    ++       
Sbjct: 145 YPHLCICGDFNIAPEDRDIYNPQNRENHIMASAAERQALDAIANLGLADGFRKFTQDGGH 204

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  +    Y+  I           D       + SDH P+
Sbjct: 205 FTWWDYRAASFTRNRGWRIDHHYLSPGLYQNAIACYI-------DTEPRTQPKPSDHAPV 257

Query: 299 SIDY 302
            ++ 
Sbjct: 258 ILEI 261


>gi|217976524|ref|YP_002360671.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2]
 gi|217501900|gb|ACK49309.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2]
          Length = 270

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/307 (9%), Positives = 78/307 (25%), Gaps = 65/307 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              + +WNIN                       L+ ++      D++ LQE    +A   
Sbjct: 2   SFSIATWNIN----------------SVRLRIDLVARFLNEHAPDLLCLQETKCRDA--- 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +  +L       +    +  +A+  +               D+      
Sbjct: 43  ------EFPLSAFHKLGYPHVEINGQKGYHGVAIASRLPLGDIDRRGFCEKGDARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             AV    +   + + + + ++ +    D  +   +P  +        +  W+     + 
Sbjct: 93  -LAVSFTPQGAARPVRLHNFYVPAG--GDEPDPLINPKFAHKLAFLDEMAAWMHHGAIAA 149

Query: 203 VPFVIAGDFNRKINYLG--NNDDFWKTID--------------PNDSLIRFPKEKDSRCN 246
              ++ GD N         ++    + +                   +    +       
Sbjct: 150 SDAILVGDLNIAPLEADVWSHKALLRVVSHTPIEVEKFGVFQQAGPWVDAMRRYVPPEEK 209

Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+ ++ ++    L                   +R SDH 
Sbjct: 210 LYTWWSYRARDWALSGRGRRLDHVLVSESLAPRLGG-------MKVLTESRGWERPSDHV 262

Query: 297 PISIDYD 303
           P+ + +D
Sbjct: 263 PVIVRFD 269


>gi|221633952|ref|YP_002523178.1| putative endonuclease/exonuclease/phosphatase family protein
           [Thermomicrobium roseum DSM 5159]
 gi|221156684|gb|ACM05811.1| putative endonuclease/exonuclease/phosphatase family protein
           [Thermomicrobium roseum DSM 5159]
          Length = 608

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 83/288 (28%), Gaps = 56/288 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   +    + +V++NI             +   R   D     Q  + L  DIV LQE+
Sbjct: 374 PVPRAGGNDLLVVTYNIQ---------SGYDRQHRW--DLEATAQAIERLQPDIVLLQEV 422

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                V     + TW    S    +  +   +++D     AV      +  ++      +
Sbjct: 423 SRGWLVTSSADQLTW---LSRRLGMQAAWGPASDDGLWGNAVLSHGQPLEIRTTRFRVTE 479

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R AV + +  +   +WV   HL          +    + ++   Q + L  +
Sbjct: 480 NL-----QRGAVAVRLAPHTGSLWVASTHL----------DDPRQAVTVRLAQIEELLVF 524

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +      L P V+ GDFN +             +    + +       +           
Sbjct: 525 LQ----PLRPLVLGGDFNAEPGSPELIRLSESGLIDAAAAVGATDPTSAD---------D 571

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             IDY  +                              SDH P+ +  
Sbjct: 572 RRIDYLFITDELRPLAGSVPPIS--------------ASDHRPVVVRL 605


>gi|326801889|ref|YP_004319708.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21]
 gi|326552653|gb|ADZ81038.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21]
          Length = 259

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 86/302 (28%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ +    D+V LQE          
Sbjct: 1   MKIATYNVNGVNG----------------RLPVLLRWLEEAKPDVVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   ++           +A+  +++ +++    L G  +        
Sbjct: 35  LKAPQEKFPEQAIREAGYNVIWHGQKSWNGVAILARHLDIIEFGRVLPGDPEDTHSRY-- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E +   I +  ++L +   +   +  Y        +  Q L +   +     +
Sbjct: 93  ------IEASINNIHIGCLYLPNGNPVPGPKFDYK------LKWLQRLANHAQELLNKNI 140

Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P ++ GD+N     L            +   +                 ++         
Sbjct: 141 PVILTGDYNVIPTELDVYKPERWVDDALFRPEVRMAFSDLMTQGWTDAIRQLYPNERIYT 200

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + ID+F++     + L+           D      ++ SDH P+ I
Sbjct: 201 FWDYFRNAYGRDAGLRIDHFLLSPQLVEKLVAAGV-------DRYVRGWEKTSDHAPVWI 253

Query: 301 DY 302
           + 
Sbjct: 254 EL 255


>gi|254475570|ref|ZP_05088956.1| exodeoxyribonuclease III [Ruegeria sp. R11]
 gi|214029813|gb|EEB70648.1| exodeoxyribonuclease III [Ruegeria sp. R11]
          Length = 268

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 89/306 (29%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L ++  +   D+V LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------IKARINALPEWLDDAQPDVVVLQEIKS---VDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +           ++           +A+  K      +        D  +R    
Sbjct: 42  FPRELF-------EDRGYNVETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +E  V +  + I +  ++L +   ++             +      + ++       +
Sbjct: 92  --IEATV-VGKQAIRICGLYLPNGNPVELNADGTPVEGGKYAYKLAWMERMRARAQALLD 148

Query: 201 SLVPFVIAGDFNRKI---NYLGNNDDFWKTIDPND-----------SLIRFPKEKDSRCN 246
             +P ++AGD+N      +           +   +                 + +     
Sbjct: 149 EEMPALMAGDYNIIPQAEDAKKPEAWLEDALHRTESRAAFQRIVNLGFTEAFRARHQGPG 208

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+F++   A   ++           D       + SDH P
Sbjct: 209 HYSFWDYQAGAWQRNNGIRIDHFLLSPQAADLMLDCQI-------DKDVRGRDKPSDHVP 261

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 262 VWVELD 267


>gi|145226094|ref|YP_001136748.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK]
 gi|145218557|gb|ABP47960.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK]
          Length = 399

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 77/279 (27%), Gaps = 23/279 (8%)

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
           N    +      +    ++  ADIV + E  +  A+          +       +     
Sbjct: 123 NPEPVSELATDHMAMVIRDSGADIVGVVEADNRVALDMFAQSFLKRVGCRPYEQVMLFDG 182

Query: 105 DSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSFSRAGNRRA--VELLVEINGKKIWVL 160
           +    I   + VR +        +++      D   R  +R      +  E +G+ + VL
Sbjct: 183 NDPRGIDVGLLVRDRASYPVTYFRTHIFEPDPDGSGRLFSRDCAEYHITEEASGRTVVVL 242

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-VPFVIAGDFNRKINYLG 219
             HLKS  +                +QA+ + +  TQ          + GD N      G
Sbjct: 243 VNHLKSKGYNSE---DDPIGAKQRRRQAEGIAEIYTQLVRDGFDQVAVLGDLNDSPTLDG 299

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSR----CNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
             +   + +           +                    IDY ++     + ++    
Sbjct: 300 KPESSLQPLFDTGLKDISEHDGFDPGERLGTFGTGHTLASKIDYILLSPALSERVVAGGI 359

Query: 276 -----------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +     D + +     SDH  I  D +
Sbjct: 360 IRSGMWRGPRVRKPWKMYDTLTAEQHAASDHALIWADLE 398


>gi|116073418|ref|ZP_01470680.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9916]
 gi|116068723|gb|EAU74475.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9916]
          Length = 276

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 84/300 (28%), Gaps = 63/300 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWN+N                   +    +  + ++   D++ LQE         +FP
Sbjct: 3   IASWNVN----------------SVRTRLDHVLAWLQSHQPDLLCLQE---TKVADPLFP 43

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +  +           +         +  +A+  +      +   +               
Sbjct: 44  QTAFESI-------GYRVSFHGQKSYNGVALISRTPLDDVRCGFIGELPGDLEAGEL-GE 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + ++      + V+++++ +   L S +  Y        +    LK +    +E   P 
Sbjct: 96  QKRVISALLDGVRVVNLYVPNGSSLTSDKYPYK------LKWLNCLKRYREAAQERDEPL 149

Query: 206 VIAGDFNRKINYLGNND------------DFWKTIDP--NDSLIRFPKEKDSRCNANKNL 251
            I GDFN  +     +D                 ++    + ++   +  +         
Sbjct: 150 CIVGDFNIGMEARDIHDPERLTGGIMASDAERTALNEALGEGMVDVFRAFEPDAGHWSWW 209

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+  + ++                    +   ++ SDH P+ +D 
Sbjct: 210 DYRSGAWNRDSGWRIDHIYLSEDLLDLARSCVIH-------KQERGKEQPSDHAPVVVDL 262


>gi|306844277|ref|ZP_07476869.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           BO1]
 gi|306275349|gb|EFM57090.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           BO1]
          Length = 369

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 99/366 (27%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S ++N                +  R       +          
Sbjct: 2   FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 62  ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        S+  L   D                 R   R  + + + I G+ +
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQPELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213
            +   HLKS     +  +  + S  +   +A+ ++  I +K      +   ++I GDFN 
Sbjct: 182 SLFVAHLKSMSGARNGLDGRTSSHPVRLAEARAIRRIIEEKFGIDRVAERRWLICGDFND 241

Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +                  
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 257 ----IDYFVMDQNAYKF---LIQESFS------------EILYNEDDIKSRGKRLSDHCP 297
               +DY +           ++ +               + +           + SDHCP
Sbjct: 302 HLCQLDYIMASPAFAAKNEHVVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           +S+  +
Sbjct: 362 VSVTLN 367


>gi|291333503|gb|ADD93201.1| exodeoxyribonuclease III [uncultured archaeon MedDCM-OCT-S08-C282]
          Length = 259

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 93/306 (30%), Gaps = 74/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           +R VSWN+N L                 +    +  Y  +L AD+V LQE  +       
Sbjct: 1   MRFVSWNVNGLRA---------------AIRKGIDGYFDDLKADVVMLQETRTLEEQLPK 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  W +         +S   + +    A+  + K            G     + + 
Sbjct: 46  DWAWPTGWDVTLHPAEKKGYSGVATASTQAHAVVAKGK------------GGVFDSNDSE 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +   V+     +  ++ +L S    D  +       +      +  + +I    + 
Sbjct: 94  GR-VLVCEVD----GVVCVNTYLPSGSNKDERQ-------TFKEGWMEEWRQFIRPYLDD 141

Query: 202 LVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+ GD N                      +   ++  +  +  L  F  +      
Sbjct: 142 TRPVVVCGDLNIAHTEDDIWNPKGNARNSGFLPHERAWFSDLLADGWLDAFRHKVGDGAK 201

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDYF+++  A + ++  +          ++  G  +SDH P
Sbjct: 202 VYSWWSNRGQARAKDRGWRIDYFLLNPAAAEAMVDCTI---------VRQGGIDVSDHAP 252

Query: 298 ISIDYD 303
           + +D D
Sbjct: 253 VVLDLD 258


>gi|268318163|ref|YP_003291882.1| exodeoxyribonuclease III Xth [Rhodothermus marinus DSM 4252]
 gi|262335697|gb|ACY49494.1| exodeoxyribonuclease III Xth [Rhodothermus marinus DSM 4252]
          Length = 254

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 79/302 (26%), Gaps = 75/302 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   +    + Q+    + DIV LQE    +A      
Sbjct: 3   VATWNVN----------------SIRARLERVLQWLDRTEPDIVCLQETKVVDA------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                      R   +         +  +A+  +      +       +  F +A     
Sbjct: 41  ----DFPADPFRERGYELAVFGQKAYNGVAILSRLPLQDVRRGLDGEQEARFLQARC--- 93

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                   G ++ V  +++ +   + S    Y        +    L+ ++ +      P 
Sbjct: 94  --------GDRLVVCSVYVPNGGTVGSEAWDYK------LRWFDRLRAYLERAASPETPL 139

Query: 206 VIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           ++AGDFN                   +       ++ +     +       +        
Sbjct: 140 LLAGDFNVAPEPRDVAFPEAWADSVLFHEAARAAFRKLIDWGLVDLIRLHHEGP-GPFTW 198

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           ID+ +          +             + +GK+ SDH P+   
Sbjct: 199 WDYRNLAFPRGDGLRIDHLLATPPVAACCTEAGVH-------REERKGKKPSDHAPVWAR 251

Query: 302 YD 303
            +
Sbjct: 252 LN 253


>gi|255601665|ref|XP_002537723.1| conserved hypothetical protein [Ricinus communis]
 gi|223515316|gb|EEF24660.1| conserved hypothetical protein [Ricinus communis]
          Length = 287

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 91/311 (29%), Gaps = 57/311 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWN+         +    ++ RT  +   L  +      D++ +QE+    +V   
Sbjct: 1   MRLISWNVQW----GRSAHGDVNLTRTLDEARRLVDF------DVLCMQEVTRGFSVLAG 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNND-------------IHTAIAVRKKNVRVLQQSYPL 130
            P +      +              D                  A+  +        + L
Sbjct: 51  HPGDDQFAEIADALPGFTVLEAIGADLPALKLDAPAAPRRQFGNAIATRLPVERVIRHSL 110

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               D  + +  R A+E ++   G  + V+  HL+ +    SL+   +    L   Q + 
Sbjct: 111 PWPVDPEAPSMQRVALEAVLRAPGGSVRVIVTHLEFY----SLKQRLAQVDRLRQLQQEA 166

Query: 191 L---------KDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                     ++ I    ++  P   V+ GDFN   +                 +  +P 
Sbjct: 167 AGHAAHPVPAENAIGPFADTGRPVSAVVCGDFNSAYDSEAYRRMLEPLEGSPSFIDAWPT 226

Query: 240 EKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               +                  +  D+  + ++    L +                  R
Sbjct: 227 LHPGQTPPMTAGVFDKVQWADGPLTCDFVFVTEDLRMRLRRCEV-----------DGATR 275

Query: 292 LSDHCPISIDY 302
            SDH PI ++ 
Sbjct: 276 ASDHQPILVEL 286


>gi|47208868|emb|CAG06321.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 441

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 79/282 (28%), Gaps = 11/282 (3%)

Query: 24  VRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NA 79
           +R++ WNI    L E ++G                L+ +       DI+ LQE+  Y + 
Sbjct: 149 IRIMQWNILAQALGEGKDGFIRCPLDALNWPERKYLILEEILTYLPDILCLQEVDHYYDT 208

Query: 80  VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              +     +   F +           +N     A+  R+    +       L A    +
Sbjct: 209 FQPIMASLGYHGTFLAKPWSPCLDIEQNNGPDGCALFFRRSRFSLQATERLRLSAMMLPT 268

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                    L     G+++ V   HLK+    + L +          Q+         + 
Sbjct: 269 N-QVAIVQMLTCRPTGRRLCVAVTHLKARSGWERLRSAQGADFLQKLQRMISQNGGQRRA 327

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRN 253
               +P V+ GDFN +             +  + +          +   +      +   
Sbjct: 328 MSGSIPLVVCGDFNAEPTEDVYKRFSSSPLGLSSAYKLLSSDKQTEPAYTTWKIRPSGEC 387

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +  +DY     ++                 D        SDH
Sbjct: 388 RSTLDYIWYTGDSLSVEQLLDIPTEEQIGPDRLPSYHYPSDH 429


>gi|188533711|ref|YP_001907508.1| Exodeoxyribonuclease III [Erwinia tasmaniensis Et1/99]
 gi|188028753|emb|CAO96615.1| Exodeoxyribonuclease III [Erwinia tasmaniensis Et1/99]
          Length = 268

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 84/311 (27%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L+   +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLQAIVEQHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  K   +  +       +D+      R
Sbjct: 42  FP-------LEEVASLGYHVFYHGQKGHYGVAMLCKQQPIAVRRGFEGDDEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +  +   I VL+       F       +        +  + L+ ++ Q++++  
Sbjct: 90  RIIMADIPTSDGVITVLN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLEQQQKADN 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
             VI GD N   +                           +   + ++         +  
Sbjct: 145 QVVIMGDMNISSSDLDIGIGEVNRKRWLRTGKCSFLPEEREWMDRLMNWGLVDTWRAQNA 204

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +   +       +           ID  +  +      +           D      ++ 
Sbjct: 205 EVN-DRFSWFDYRSKGFDDNRGLRIDLILASRPLAGRCVATGI-------DYDIRAMEKP 256

Query: 293 SDHCPISIDYD 303
           SDH PI   + 
Sbjct: 257 SDHAPIWAQFS 267


>gi|171463432|ref|YP_001797545.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192970|gb|ACB43931.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 288

 Score = 93.1 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 84/310 (27%), Gaps = 60/310 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMG--SY 77
              VR+ +WN+N+L              R       L+         D + LQE+     
Sbjct: 2   TDSVRIAAWNVNSL------------KVRLPQVLRWLQDQENKRQPIDALCLQELKLTDD 49

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               K      +    + ++        +   I    A           S+         
Sbjct: 50  KYPHKELEDAGYLSLAAGQKT------YNGVAIIVRKAALAPIASDTATSFLKPIRNIPN 103

Query: 138 SRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            +   +R +   +   G   + ++  +  +    DS +  Y           + L  W+ 
Sbjct: 104 FKDEQQRILAATIPFAGTPAMRLVSAYFPNGQSPDSDKFVYK------LGWLKALHTWLG 157

Query: 197 QKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           ++ E+     + GDFN                         + ++ +        F   +
Sbjct: 158 EELENNSRLALLGDFNIAPADEDVHDSKVWEGQSLVSPPEREAFQGLIKLGLNDSFRMFE 217

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +          ++          ID+ ++ +      I  +        D      ++ 
Sbjct: 218 QAP-KVFSWWDYRMMGFRRNAGMRIDHILLSEALKDQCIASTV-------DKEPRTWEQP 269

Query: 293 SDHCPISIDY 302
           SDH P+  ++
Sbjct: 270 SDHAPVIAEF 279


>gi|290956326|ref|YP_003487508.1| exonuclease [Streptomyces scabiei 87.22]
 gi|260645852|emb|CBG68943.1| putative exonuclease [Streptomyces scabiei 87.22]
          Length = 259

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 82/304 (26%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ LQE          
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEA---KIAEDG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +         R   +            +AV  +          L G          R
Sbjct: 42  FPLD-------ALREAGYEAAVHATGRWNGVAVISRVGIEDVVKG-LPGDPGYDGSVEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +D     Y        Q  + LK  +        
Sbjct: 94  A-----ISATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGSR 142

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N         D                   ++         P+      +  
Sbjct: 143 PFAVMGDYNVAPTDDDVYDVAAFEGLTHVTPAERAALASLREAGLTDVVPRPLKYE-HPF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID  V     +   + +S+       D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLCFPKNRGMRID-LVYGNETFAKAVTDSY------VDREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D +
Sbjct: 255 VDLE 258


>gi|126729725|ref|ZP_01745538.1| exodeoxyribonuclease III [Sagittula stellata E-37]
 gi|126709844|gb|EBA08897.1| exodeoxyribonuclease III [Sagittula stellata E-37]
          Length = 260

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 83/302 (27%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  + ++ + D+V  QE+ S       
Sbjct: 1   MKIATFNING----------------IKARIGALSDWLQSANPDVVLAQEIKS------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +N     +       ++           +A+  K               D  +R    
Sbjct: 38  VDENFPREHFEDM---GYAVETHGQKGFNGVAILSKLPLEDVSRGLPGDPDDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V  +   + +  ++L +       +  Y  +        + L     Q   S +
Sbjct: 92  --IEATVMGDTTAVRLCGLYLPNGNPAPGPKYDYKLA------WMERLHTRAEQLLASEM 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
           P V+AGD+N      +    +      +             N       + +        
Sbjct: 144 PAVMAGDYNVIPQAEDAAKPDAWTDDALFLPQTRQAFRRIVNLGFTEAFRARTQGPGHYS 203

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L      + +          ++ SDH P+  
Sbjct: 204 FWDYQANSWQRNNGIRIDHLLLTPQAADLLNDCWIEKDV-------RAAEKPSDHVPVWC 256

Query: 301 DY 302
           D 
Sbjct: 257 DL 258


>gi|54302910|ref|YP_132903.1| hypothetical protein PBPRB1231 [Photobacterium profundum SS9]
 gi|46916334|emb|CAG23103.1| hypothetical protein PBPRB1231 [Photobacterium profundum SS9]
          Length = 357

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 92/336 (27%), Gaps = 55/336 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +  +++ ++N+    E              ++       + +Y      D++  QE+ S 
Sbjct: 19  SDTIKIATFNLFNYLEPPFAFYDFERIYTAEQWQKKQNWIAEYLIEYKPDVIGFQEVFSP 78

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAK 134
            ++  +   + +  ++                   AIA R     +          +   
Sbjct: 79  ESLKILVAAHGY-GYFEVVDEAEVIDDFICRSPVVAIASRYPITHIEAVVPDKELAVSMG 137

Query: 135 DSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ------- 186
                  +R+ +   +E+    +     +H KS   +   EN  +      +        
Sbjct: 138 LKDDFTFSRQPLRATIELPHIGECDCYVVHFKSKRPMIEHENNDNDESRTQTIIQTLKAE 197

Query: 187 --------------QAQWLKDWITQKKESLVPFVIAGDFNRKIN---------------Y 217
                          A  L   I +++++ +P ++ GDFN  ++                
Sbjct: 198 VTGSWGSSIQRGSEAALLLMSIIERREKTGLPMMLMGDFNDSLSDGVLAHLLTGSLRFIS 257

Query: 218 LGNNDDFWK--TIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQ 272
              +D       +     L +         +          K  +DY ++          
Sbjct: 258 ESESDVILAKYRLKDTWDLYQATDNCAEMAHRTPTHYYGMKKSVLDYILLSCEFDAQYHS 317

Query: 273 ESFSEILYNEDDI------KSRGKRLSDHCPISIDY 302
             F    ++  D         R  + +DH  + I  
Sbjct: 318 SLFEVSEHDTYDRHLINPSFERDSQSTDHGIVCITL 353


>gi|323529504|ref|YP_004231656.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
 gi|323386506|gb|ADX58596.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
          Length = 269

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 79/304 (25%), Gaps = 70/304 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ ++NIN                   S    L Q+ +    DIV LQE+    A   
Sbjct: 3   TLRIATFNING----------------IRSRQAALLQWLEREAPDIVCLQEL---KAADS 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP +         R   +            +A+  K    L+    L G +D       
Sbjct: 44  AFPAD-------ALRDAGYHAIWQGQSAWNGVAILSKGEPPLESRRGLPGFEDDTHSRYL 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             AV          + V  ++L +       +  Y        +    L D   +   S 
Sbjct: 97  EAAV--------GGLLVCCLYLPNGNPQPGPKFEYK------LKWFDHLIDHAAKLLRSG 142

Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P V+AGDFN                         + ++ +                   
Sbjct: 143 HPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYRRLVAQGWTDALRTHFGDERVY 202

Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 +          ID+ ++  +    L            D         SDH P  
Sbjct: 203 TFWDYFRRHWDTNSGLRIDHILLSPDLAPRLRDAGV-------DRWVRGEPHASDHAPTW 255

Query: 300 IDYD 303
           ++ D
Sbjct: 256 VELD 259


>gi|260574689|ref|ZP_05842692.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2]
 gi|259023106|gb|EEW26399.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2]
          Length = 263

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 78/305 (25%), Gaps = 72/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ S+NIN                   +    L  +  +   D+V LQE+         
Sbjct: 5   MKIASFNING----------------IKARIEALPAWLADAAPDVVVLQEIKSVDEGFPR 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F    + +                      +A+  K               D  +R  
Sbjct: 49  GLFEDLGYRV------------ETHGQKGFNGVAILSKLPLEDVTRGLPGDPTDEQARW- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E  V I  + + V  ++  +       +  Y             +++       +
Sbjct: 96  ----IEATV-IGARAVRVAGLYAPNGNPAPGPKYDYK------LGWMARMRERALGLLAT 144

Query: 202 LVPFVIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNA 247
             P V+AGD+N      +           +             N       + +      
Sbjct: 145 EEPVVLAGDYNVIPQAMDAAKPEAWLEDALYLPQSRAALQRIVNLGYADAFRLRHPGPGH 204

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++   A   L            D     G + SDH P+
Sbjct: 205 YSFWDYQAGAWERNNGIRIDHLLLSPQASDLLRDAGI-------DKAVRAGDKPSDHVPV 257

Query: 299 SIDYD 303
            ID D
Sbjct: 258 WIDLD 262


>gi|170693030|ref|ZP_02884191.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M]
 gi|170142028|gb|EDT10195.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M]
          Length = 292

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 83/315 (26%), Gaps = 60/315 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RLV WNI      +G             D   + + A+ L D DI+ +QE+        
Sbjct: 1   MRLVDWNIQWGRGVDG-----------RVDLARIVREARALCDFDIMCMQEVTRGFHEPQ 49

Query: 75  --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKKNVRVL 124
                    S +  A++                                 A+  +     
Sbjct: 50  QMGGLAGGPSADQFAELAALLPGMTVTDAIGSDLPGVGVGGGKQRRQFGNAIVTRLPVRQ 109

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
              + L    D    +  R A+E +++ +   + V+  HL+ +   ++           L
Sbjct: 110 VLRHSLPWPADPAKPSMLRVALEAVIDTDVGPLRVISTHLEFYS--ETQRLAQVERLREL 167

Query: 185 SQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
            Q+A        + ++   PF         ++ GDFN                       
Sbjct: 168 HQEACGHARRPARAEKQDSPFADSGRPMNAIVCGDFNSAFESAAYRKMLEPIAGAPAFAD 227

Query: 236 RFPKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                  +   A                  D+  + ++    +                 
Sbjct: 228 ACTLAHGNDARAATVGLYDREQWPDGPFACDFVFVTEDLAPRVACCEV-----------D 276

Query: 288 RGKRLSDHCPISIDY 302
              R SDH P+ ++ 
Sbjct: 277 AHSRSSDHQPMWLEL 291


>gi|327538548|gb|EGF25210.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula
           baltica WH47]
          Length = 279

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 90/309 (29%), Gaps = 54/309 (17%)

Query: 1   MIRK----YVLALVFFLVPCTASVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M++     ++  LV F        A+ VR+  + +NI+     +              D 
Sbjct: 16  MMKGCGLVWLAGLVMFFGTGVLRAAEPVRVRVLCYNIHHGEGVDR-----------KLDL 64

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             + +  ++++ D+V LQE+    + +    +       +    +           H   
Sbjct: 65  ERIAKVIQSVEPDLVTLQEVDQNASRSGSVDQPAELARLTGM-QVAFGPNIPLQGGHYGN 123

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  K      ++  L      F     R  +   + I G+   +L +            
Sbjct: 124 ALLSKYPIANHRNELLPN----FDNGEQRGVLSAELTIPGRNQPLLLLATHL-------- 171

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                        A+ +   ++  +    P ++AGD N  +N              ++  
Sbjct: 172 -DSRRDDRERIASAKAINRIVS--ETPRRPALLAGDMNDVLNSP----------TLDELE 218

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             + +  +           +  ID+ +   +    LI+    +               SD
Sbjct: 219 TMWTRVNEQVMPTIPVANPRRQIDFILFRPSNSWKLIEVKVLDEAV-----------ASD 267

Query: 295 HCPISIDYD 303
           H  I    +
Sbjct: 268 HRAIFAVLE 276


>gi|301310113|ref|ZP_07216052.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300831687|gb|EFK62318.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 353

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 66/297 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + V+++++N+N  +                     +  + +  D DIV LQE    +A+ 
Sbjct: 98  EAVKVITYNVNNFNTDG------------KKQLPNIADWLRKEDPDIVCLQECPVESALR 145

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                 T           + +K           A+  K   +  +S     + +      
Sbjct: 146 MDSLAKTLSFLPYYCSTRSATKAA-------GNAIFSKYPILRFESILYPESSNKS---- 194

Query: 142 NRRAVELLVEINGKKIWVLDIHLK-----------SFCFLDSLENTYSPSCSLLSQQAQ- 189
               +  +++I G  + V + H +                +  +   + +   ++ Q + 
Sbjct: 195 ----LFAVMDIQGDSVRVFNNHFQTTSVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKK 250

Query: 190 ------WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    D+I Q  ++   P ++ GDFN                   D    F     
Sbjct: 251 NFVKRATQADYIRQMLDAGEGPVILCGDFNDTPASYTYRTV------KGDLTDGFRDCGS 304

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 + L+    IDY +   +              +      S     SDH P+ 
Sbjct: 305 GFGYTFRQLKRIFRIDYIIYSPD--------------FKGVTYDSPNLDYSDHKPVV 347


>gi|256840117|ref|ZP_05545626.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739047|gb|EEU52372.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 353

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 85/297 (28%), Gaps = 66/297 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + V+++++N+N  +                     +  + +  D DIV LQE    +A+ 
Sbjct: 98  EAVKVITYNVNNFNTDG------------KKQLPNIADWLRKEDPDIVCLQECPVESALR 145

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                        T   + +     +       A+  K   +  +S     + +      
Sbjct: 146 -------MDSVAKTLSFLPYYCSTRSATKAAGNAIFSKYPILRFESILYPESSNKS---- 194

Query: 142 NRRAVELLVEINGKKIWVLDIHLK-----------SFCFLDSLENTYSPSCSLLSQQAQ- 189
               +  +++I G  + V + H +                +  +   + +   ++ Q + 
Sbjct: 195 ----LFAVMDIQGDSVRVFNNHFQTTSVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKK 250

Query: 190 ------WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    D+I Q  ++   P ++ GDFN                   D    F     
Sbjct: 251 NFVKRATQADYIRQMLDAGEGPVILCGDFNDTPASYTYRTV------KGDLTDGFRDCGS 304

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 + L+    IDY +   +              +      S     SDH P+ 
Sbjct: 305 GFGYTFRQLKRIFRIDYIIYSPD--------------FKGVTYDSPNLDYSDHKPVV 347


>gi|254454283|ref|ZP_05067720.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238]
 gi|198268689|gb|EDY92959.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238]
          Length = 266

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 87/308 (28%), Gaps = 71/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  + +    D+  LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------VKARIGALTDWLEASKPDVALLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRA 140
           FP+          + + ++           +A+  K            P    +D     
Sbjct: 42  FPREH-------IQDLGYTVETHGQKGFNGVAILSKLPLEDVTRGLPDPEGAGRDGEDDI 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     ++    K I +  ++L +       +  Y             LK   +Q  E
Sbjct: 95  EARYIEATVM--GEKAIRICGLYLPNGNPAPGPKYDYK------LHWMDRLKARASQLIE 146

Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
              PF+IAGD+N                       +   F + ++    L    +     
Sbjct: 147 LEEPFLIAGDYNIIPQPEDAARPDVWADDALFRPDSRAAFRRLLNLG--LTEAFRACHQG 204

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           ID+F++       L        +          ++ SDH
Sbjct: 205 SGHYSFWDYQAGAWDKNDGIRIDHFLLSNQCADLLKDCWIESDV-------RGREKPSDH 257

Query: 296 CPISIDYD 303
            P+ ++ D
Sbjct: 258 VPVWVELD 265


>gi|170764194|ref|ZP_02634166.2| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|170660566|gb|EDT13249.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens E str. JGS1987]
          Length = 262

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 93/291 (31%), Gaps = 45/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+    + +  + W       +     + +  K+   DI+  QE   +      
Sbjct: 4   LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137
              + +         +   +  +  D   AI   K    VL+         P +     F
Sbjct: 57  DLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109

Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           + +  R   +L +  +I+G KI + + HL         E        ++ ++ +      
Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRN 253
              K    P++I GDFN  +     N    +  +     + +   K              
Sbjct: 159 KNYKIYKTPYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY 218

Query: 254 KIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               IDY +  +          +     N DD K      SDH P+  + +
Sbjct: 219 DGRIIDYILYSKE---------YEIKSLNIDDRKINRGYPSDHYPVICELE 260


>gi|172060778|ref|YP_001808430.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
 gi|171993295|gb|ACB64214.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
          Length = 284

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 84/308 (27%), Gaps = 52/308 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+ WN+    + +GV            D       A++L D D++ +QE+        
Sbjct: 1   MRLIDWNVQWGRDADGV-----------VDLARTIAAARSLGDFDVLCMQEVTRGFGALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                +   ++         +                     A+  +          L  
Sbjct: 50  GQPGPDQFTELAALLPGYTIFEAIGADLPPLEPDAARRQFGNAIATRLPVGRVLRQLLPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D+   +  R A+E+ +      + ++  HL+ +            +     ++A    
Sbjct: 110 PADAGEPSMPRVALEVELTTPSGALRIITTHLEFYSARQ--RLAQVDALRARHREACAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           D     + +  PF         +I GDFN   +            D    +  +      
Sbjct: 168 DQPAPAENATGPFTATGQARDAIICGDFNSAFDSDAYRRLLEPIADAPSFVDAWVGRHQG 227

Query: 244 RC--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     +  +     +  D+  +       + +                  R SDH
Sbjct: 228 HTPPPTAGVYDTAQWSDGPLACDFVFVTDTLLPRVTRCEI-----------DGDVRASDH 276

Query: 296 CPISIDYD 303
            P+ ++ D
Sbjct: 277 QPVVLEVD 284


>gi|315503070|ref|YP_004081957.1| exodeoxyribonuclease iii xth [Micromonospora sp. L5]
 gi|315409689|gb|ADU07806.1| exodeoxyribonuclease III Xth [Micromonospora sp. L5]
          Length = 265

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 74/301 (24%), Gaps = 69/301 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    L  +      D+V LQE    +     
Sbjct: 1   MRLATWNVN----------------SVKARLPRLLDWLATTKPDVVCLQETKCPDGA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +     ++     +AV  +              +  F     R
Sbjct: 42  -------FPVAEVGELGYEVASHSDGRWNGVAVLSRVGLADVTVG--FPGEPGFPEPEAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +     ++ V  +++ +    D     Y  +          L+D +  +    +
Sbjct: 93  A-----ISATCDELRVWSVYVPNGRAPDDPHYAYKLA------WFAALRDALESEVAGAL 141

Query: 204 PFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANK 249
           P  + GDFN         D                      +  L           +   
Sbjct: 142 PVAVCGDFNVAPTDADVWDPALFVTSTHVTPAERAALAALRDLGLEDVVPTPMKGPHPFT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +         + ID      +  +              D    +GK  SDH PI +
Sbjct: 202 YWDYRAGMFHQNKGMRIDLVYASASFARA-------VRSAYVDREARKGKGPSDHAPIVV 254

Query: 301 D 301
           D
Sbjct: 255 D 255


>gi|153836353|ref|ZP_01989020.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ3810]
 gi|149750255|gb|EDM61000.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ3810]
          Length = 317

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 101/314 (32%), Gaps = 30/314 (9%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           S   ++  V+ N+                 S ++        +   + L+ DI+ LQE+ 
Sbjct: 2   SQPSRITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGLQEVF 61

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLG 132
           S       F    +  +++T            +    AIA R     V    +    L  
Sbjct: 62  SIEETRTYFLSLGFP-YFATVDTPKIEDEYIYSRPVVAIASRFPIEDVKPVEFDSNSLTP 120

Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLL 184
              + +   +R+ +   +V      I +   HLKS    D       S       S    
Sbjct: 121 FGVNEAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTETPEPSSRVMARWLSTQQR 180

Query: 185 SQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             +A  L+D +  Q +   +P V+ GD N+ I+    N+   +T   + + ++     + 
Sbjct: 181 GWEAAMLRDAMQAQYRAHPIPTVLMGDMNQPISKKSVNNVLTETFSDSVTELQLKDGWNL 240

Query: 244 RCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289
           +           + +      +DY ++ Q             I Y   +         + 
Sbjct: 241 QTGSSLEIRPATHYHFSTGNVLDYILLSQEFDTHSDVSVAEVIDYQVLEQHLINPSYEKD 300

Query: 290 KRLSDHCPISIDYD 303
           K  SDH  +S+  +
Sbjct: 301 KNASDHAFVSLTVE 314


>gi|148379451|ref|YP_001253992.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 3502]
 gi|153934303|ref|YP_001383830.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 19397]
 gi|153935156|ref|YP_001387380.1| exodeoxyribonuclease III [Clostridium botulinum A str. Hall]
 gi|148288935|emb|CAL83022.1| putative exodeoxyribonuclease [Clostridium botulinum A str. ATCC
           3502]
 gi|152930347|gb|ABS35847.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 19397]
 gi|152931070|gb|ABS36569.1| exodeoxyribonuclease III [Clostridium botulinum A str. Hall]
          Length = 253

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 82/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ SWN+N L      +                 ++      DI+ +QE  +       
Sbjct: 1   MRIYSWNVNGLRAVAKKNF---------------IEWIGEESPDILCIQETKLQENQLED 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   + +  ++S           +    ++ +A   K   +  +    +   DS  R  
Sbjct: 46  NIKNIDGYYSYFS----------FAVKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRI- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    K   +L+I+  +    +                 + L ++  +  + 
Sbjct: 95  --------LITGFKDFTLLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVKE 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247
               VI GD+N   N +   +            I+ +       +               
Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIK 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY  +  N    +        +Y            SDHCP+
Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPV 248

Query: 299 SIDY 302
            ++ 
Sbjct: 249 MLEL 252


>gi|116691907|ref|YP_837440.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
 gi|116649907|gb|ABK10547.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
          Length = 599

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 83/315 (26%), Gaps = 47/315 (14%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEM 74
            VR+VS+N+ N  +       +     R              +    + L AD++ L E+
Sbjct: 277 DVRIVSFNVFNYFNGDGHGGGFDAPGNRGAKTPAAFARQEAKIVASLRALRADVIGLMEI 336

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            +         +          R ++    R   + I  A+    + V  + ++  +   
Sbjct: 337 ANNGHGDTSAIRRLAAQLGDGWRAVDPGTARLGRDAIAVALLYDSRTVEPVGRAVTVALG 396

Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----- 186
                    R  +          +   V   HLKS     +       S           
Sbjct: 397 GRH------RPPLAQTFRRIDGTRTFTVAVNHLKSKNCPHASGANLDQSDGQGCWNAART 450

Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             A  + DW+       +    ++ GD N             +T++         +    
Sbjct: 451 RAAARVADWLATSPTGIAADGVLLIGDLNSYAKEDP-----LRTLEARGYANLVVRFVGD 505

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----------------- 286
              +         +D+ +        +    F  I  +E  +                  
Sbjct: 506 AAYSYVFRGEAGNLDHALATPALAARVKAVRFWHINADEPVVLQPVPDYKTSAQRSAYYA 565

Query: 287 SRGKRLSDHCPISID 301
               R SDH P+ ID
Sbjct: 566 PDAYRSSDHDPVVID 580


>gi|332708957|ref|ZP_08428928.1| exodeoxyribonuclease III [Lyngbya majuscula 3L]
 gi|332352499|gb|EGJ32068.1| exodeoxyribonuclease III [Lyngbya majuscula 3L]
          Length = 262

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 90/308 (29%), Gaps = 75/308 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                   S    +  + +    D++ LQE  +       
Sbjct: 1   MKIATWNVN----------------SIRSRQAQVIDWLQRTQVDVLCLQETKVVDAQFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFSR 139
            +F +  + ++ S                +  +A+  +            +L        
Sbjct: 45  SLFEELGYYLYIS------------GQKSYNGVAIFSRKPATDVSMGFAAVLDTAQVGDL 92

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              +R +   V+     + ++++++ +   ++S +  Y        +  + L+D++    
Sbjct: 93  DEQKRVISATVD----GVRIVNLYVPNGASVNSEKYDYK------LRWLKILRDYLHSIL 142

Query: 200 ESLVP-FVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDS 243
           E       + GDFN  +     +                   +++        F K    
Sbjct: 143 EEQSHELCVCGDFNIALEDRDIHNPKGKEKHIMASPVERQALQSVLDLGLGDAFRKFTKE 202

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             N       +           ID+  +  N Y   I  +        D       + SD
Sbjct: 203 GGN-FSWWDYRTRAFRGNRGWRIDHIYLTPNLYNQAISCTIDIEPRKLD-------KPSD 254

Query: 295 HCPISIDY 302
           H P+ ++ 
Sbjct: 255 HSPVIVNL 262


>gi|169342361|ref|ZP_02863427.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|169299481|gb|EDS81545.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens C str. JGS1495]
          Length = 262

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 97/296 (32%), Gaps = 55/296 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+    + +  + W       +     + +  K+   DI+  QE   +      
Sbjct: 4   LKVMTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMD 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSF 137
              + +         +   +  +  D   AI   K    VL+         P +     F
Sbjct: 57  DLLDEYS-------WVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDF 109

Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           + +  R   +L +  +I+G KI + + HL         E        ++ ++ +      
Sbjct: 110 NSSLPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------ 158

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--------LIRFPKEKDSRCNA 247
              K    P++I GDFN  +      D+ +  I   ++                    + 
Sbjct: 159 KNYKIYKTPYIIMGDFNCYL-----EDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHY 213

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            K   +   IDY +  +          +     N DD K  G   SDH P+  + +
Sbjct: 214 FKGGYDGKIIDYILYSKE---------YEIKSLNIDDRKIDGGYPSDHYPVICELE 260


>gi|224500776|ref|ZP_03669125.1| hypothetical protein LmonF1_14336 [Listeria monocytogenes Finland
           1988]
 gi|254829588|ref|ZP_05234275.1| exodeoxyribonuclease [Listeria monocytogenes FSL N3-165]
 gi|284802226|ref|YP_003414091.1| hypothetical protein LM5578_1982 [Listeria monocytogenes 08-5578]
 gi|284995368|ref|YP_003417136.1| hypothetical protein LM5923_1933 [Listeria monocytogenes 08-5923]
 gi|258602005|gb|EEW15330.1| exodeoxyribonuclease [Listeria monocytogenes FSL N3-165]
 gi|284057788|gb|ADB68729.1| hypothetical protein LM5578_1982 [Listeria monocytogenes 08-5578]
 gi|284060835|gb|ADB71774.1| hypothetical protein LM5923_1933 [Listeria monocytogenes 08-5923]
          Length = 251

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 86/305 (28%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWN+N L                        +Y + +DADI  LQE          
Sbjct: 1   MRLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +++ ++  +                        + +++    ++  
Sbjct: 91  -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDNTK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           ++ +F
Sbjct: 247 LELNF 251


>gi|107026896|ref|YP_624407.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|105896270|gb|ABF79434.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
          Length = 620

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 83/315 (26%), Gaps = 47/315 (14%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEM 74
            VR+VS+N+ N  +       +     R              +    + L AD++ L E+
Sbjct: 298 DVRIVSFNVFNYFNGDGHGGGFDAPGNRGAKTPAAFARQEAKIVASLRALRADVIGLMEI 357

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            +         +          R ++    R   + I  A+    + V  + ++  +   
Sbjct: 358 ANNGHGDTSAIRRLAAQLGDGWRAVDPGTARLGRDAIAVALLYDSRTVEPVGRAVTVALG 417

Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----- 186
                    R  +          +   V   HLKS     +       S           
Sbjct: 418 GRH------RPPLAQTFRRIDGTRTFTVAVNHLKSKNCPHASGANLDQSDGQGCWNAART 471

Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             A  + DW+       +    ++ GD N             +T++         +    
Sbjct: 472 RAAARVADWLATSPTGIAADGVLLIGDLNSYAKEDP-----LRTLEARGYANLVVRFVGD 526

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----------------- 286
              +         +D+ +        +    F  I  +E  +                  
Sbjct: 527 AAYSYVFRGEAGNLDHALATPALAARVKAVRFWHINADEPVVLQPVPDYKTSAQRSAYYA 586

Query: 287 SRGKRLSDHCPISID 301
               R SDH P+ ID
Sbjct: 587 PDAYRSSDHDPVVID 601


>gi|90414419|ref|ZP_01222396.1| hypothetical protein P3TCK_10118 [Photobacterium profundum 3TCK]
 gi|90324532|gb|EAS41088.1| hypothetical protein P3TCK_10118 [Photobacterium profundum 3TCK]
          Length = 357

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/342 (11%), Positives = 93/342 (27%), Gaps = 55/342 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFL 71
             T +++  +++ ++N+    E              ++       + +Y      D++  
Sbjct: 13  AITQTLSDTIKIATFNLFNYLEPPFAFYDFERIYTAEQWQKKQNWIAEYLIEYKPDVIGF 72

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SY 128
           QE+ S  ++  +     +  F   +                AIA R     +        
Sbjct: 73  QEVFSPESLKNLVAAQGYAYFEVVDEAEVIDD-FICRSPVVAIASRYPITHIEAVIPDEE 131

Query: 129 PLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ- 186
             +          +R+ +   +E+    +     +H KS   +   EN+        +  
Sbjct: 132 LAVAMGLKNDFTFSRQPLLATIELPHIGECDCYVVHFKSKRPMIEHENSSHDESRTQTII 191

Query: 187 --------------------QAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216
                                A  L   I +++++ +P ++ GDFN  ++          
Sbjct: 192 QTLKAEVTGSWGSSIQRGSEAALLLMSIIERREKTGLPMMLMGDFNDSLSDGVLAHLLTS 251

Query: 217 -----YLGNNDDFWK--TIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNA 266
                    +D       +     L +                    K  +DY ++    
Sbjct: 252 SLRFISESESDVILAKYRLKDAWDLYQATDNCPEMAYRTPTHYYGMKKSILDYILLSCEF 311

Query: 267 YKFLIQESFSEILYNEDDI------KSRGKRLSDHCPISIDY 302
                   F    ++  D         R  + +DH  + I  
Sbjct: 312 DAQYHSSLFEISEHDTYDRHLINPSFERDSQSTDHGIVCITL 353


>gi|9885288|gb|AAG01389.1|AF199494_1 nocturnin [Homo sapiens]
          Length = 278

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 83/277 (29%), Gaps = 19/277 (6%)

Query: 36  EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAKVFPKNTWCIFYS 94
            ++          +      L+ +       DI+ LQE+  Y +    +  +  +   + 
Sbjct: 5   GKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFF 64

Query: 95  TERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
            +          +N     A+   +   +++  +   L A    +      A  L  + +
Sbjct: 65  PKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVT-IAQTLECKES 123

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQKKESLVPFVIAGDFN 212
           G++  +   HLK+           +      S Q    L++     + + +P ++ GDFN
Sbjct: 124 GRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFN 173

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAY 267
            +            +++ N +      +  S               +  +DY    ++A 
Sbjct: 174 AEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSGECRHTLDYIWYSKHAL 233

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                           +        SDH  +  D+ F
Sbjct: 234 NVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCDFSF 270


>gi|307128824|ref|YP_003880840.1| metal-dependent hydrolase [Dickeya dadantii 3937]
 gi|306526353|gb|ADM96283.1| Metal-dependent hydrolase [Dickeya dadantii 3937]
          Length = 287

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 88/312 (28%), Gaps = 63/312 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------G 75
           +VS+NI     ++G             D   +    +   ADI+ +QE+           
Sbjct: 3   IVSYNIQYGLGRDG-----------RYDLARIADEVR--GADIICMQEVERFWQRSGMMD 49

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINH---SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
               +A +  +  W    + +   +      R  N           +   +  +++PL  
Sbjct: 50  QPAELAALLGEYHWVYGANLDMDASTVSADGRVVNRRRQFGTLTLSRRPILSSRNFPLPK 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                  +  +  +E +++     I + + HL   C             ++L+  A+   
Sbjct: 110 FGTLTQHSIQQGVLETVIDTGAGAIRIYNTHLSHLCAGT----RLPQVEAMLALFARAPD 165

Query: 193 DWITQKKESLVP---------------FVIAGDFNRKINYLGNNDDFW-------KTIDP 230
           +          P                ++ GD N   +    +           + +  
Sbjct: 166 EGGAWCGGHPDPSAGWTEGRMPLMPLEMILMGDLNCLPDSEEYSRLVGPVSPHHGRLVRH 225

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              +  +        + + +      ID+ ++  +    + +                  
Sbjct: 226 RGLMDAWVAAGQPESSGSTHPSVGGRIDHCLLTPSLGLTVRRCWADTEN----------- 274

Query: 291 RLSDHCPISIDY 302
           + SDH P+ ++ 
Sbjct: 275 QGSDHHPLWVEL 286


>gi|262381640|ref|ZP_06074778.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296817|gb|EEY84747.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 353

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 66/297 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + V+++++N+N  +                     +  + +  D DIV LQE    +A+ 
Sbjct: 98  EAVKVITYNVNNFNTDG------------KKQLPNIADWLRKEDPDIVCLQECPVESALR 145

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                        T   + +     +       A+  K   +  +S     + +      
Sbjct: 146 -------MDSVAKTLSFLPYYCSTRSATKAAGNAIFSKYPILRFESILYPESSNKS---- 194

Query: 142 NRRAVELLVEINGKKIWVLDIHLK-----------SFCFLDSLENTYSPSCSLLSQQAQ- 189
               +  +++I G  + V + H +                +  +   + +   ++ Q + 
Sbjct: 195 ----LFAVMDIQGDSVRVFNNHFQTTSVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKK 250

Query: 190 ------WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    D+I Q  ++   P +I GDFN                   D    F     
Sbjct: 251 NFVKRATQADYIRQMLDAGEGPVIICGDFNDTPASYTYRTV------KGDLTDGFRDCGS 304

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 + L+    IDY +   +              +      S     SDH P+ 
Sbjct: 305 GFGYTFRQLKRIFRIDYIIYSPD--------------FKGVTYDSPNLDYSDHKPVV 347


>gi|220911600|ref|YP_002486909.1| 5'-nucleotidase domain protein [Arthrobacter chlorophenolicus A6]
 gi|219858478|gb|ACL38820.1| 5'-Nucleotidase domain protein [Arthrobacter chlorophenolicus A6]
          Length = 1512

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 98/345 (28%), Gaps = 62/345 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWK-----------------------NSVKRTTS 52
             A V   V++ S+N+       G +L                          + +    
Sbjct: 504 APAPVGGNVKIASFNVLNYFPTTGDTLTGCTYYGDRAGNPITVRGGCDARGAANAENFQR 563

Query: 53  DYTLLRQYAKNLDADIVFLQEMGS--------YNAVAKV---FPKNTWCIFYSTERLINH 101
               +        AD+V L E+ +         +A+AK+       T  I+       N 
Sbjct: 564 QQDKIVAAITKTGADVVTLMEIENSAQFGKNRDDALAKLVEALNIPTPGIWDYVRSPANA 623

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NGKKI 157
                 + I TA   +K     + +S       D+ + A  R+ +  + +      G + 
Sbjct: 624 PPLADEDMIRTAFIYKKAVAEPVGESII---HNDTTAFASARKPLAQVFKPVGGGAGTEF 680

Query: 158 WVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFN 212
             +  H KS       D  +     S    + QA+ L D+ T  Q+ +      + GDFN
Sbjct: 681 IAIANHFKSKGSAATPDDTDKGQGNSNLARTAQAKSLLDFATSLQQSKGTDKVFLIGDFN 740

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                   N          D   +         ++         +D+ +    A   +  
Sbjct: 741 SYGKEDPINVLTAAGYVNQDDKAKNADGSAK--HSYLFGGLVGSLDHILASPAANGVVTG 798

Query: 273 ESFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303
                I   E       +              R SDH P+ +  D
Sbjct: 799 ADIWNINSVESVALEYSRYNNNVTNYYAPDQFRASDHDPVVVGLD 843


>gi|167563395|ref|ZP_02356311.1| exodeoxyribonuclease III [Burkholderia oklahomensis EO147]
          Length = 258

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 80/302 (26%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L+                     +  +    D D++ LQE          
Sbjct: 1   MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +       S P        +  G  
Sbjct: 35  LKVPDEKFPRADLEAAGYRSWFTGQKTYNGVAILAR------ASLPFDETNVVRNIPGFE 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A + L+      + ++  +  +    DS +  Y        Q    L+ W+  + +   
Sbjct: 89  DAQQRLIAATIDGVRIVSAYFPNGQAPDSDKFVYK------MQWLDALQAWLKDEMQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  D       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLLALGFVDAFRRFDQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D +    ++ SDH P+  
Sbjct: 203 WWDYRMLAFRRNAGLRIDHILLSPALADTCTSC-------MVDRVPRTWEQPSDHTPVVA 255

Query: 301 DY 302
             
Sbjct: 256 QI 257


>gi|293371502|ref|ZP_06617922.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292633539|gb|EFF52102.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 296

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 47/288 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL S+NI T  ++   +               L    +    D+  +QE  +   +  +
Sbjct: 42  IRLASYNIRTKGDKGDKA--------WEVRLNALVDVVRRNKFDMFAIQEGRTSQ-LKDM 92

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKD----SFS 138
              N +             +   N   H AI  +K   +VL+   +      D     + 
Sbjct: 93  MILNEYSYI-------GRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWG 145

Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R       +   +GKK +V + H                S  +L +Q + +     
Sbjct: 146 ARCRRICTWGYFKDLRSGKKFYVFNSHT-----DHEATEARRQSSFMLLEQVRKIAK--- 197

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
                  P    GDFN   +          ++  +         K    +     +    
Sbjct: 198 -----GRPTFCTGDFNATPDEEPVQLLLKDSLLLDSYKCTLTPPKGPSGSFYAYDKTGKT 252

Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ID+  +                 +  DD     K  SDH P+ ++
Sbjct: 253 AKRIDFIFVTPKIKILS--------YHTIDDDIKYNKYSSDHFPVMVE 292


>gi|302866656|ref|YP_003835293.1| exodeoxyribonuclease III Xth [Micromonospora aurantiaca ATCC 27029]
 gi|302569515|gb|ADL45717.1| exodeoxyribonuclease III Xth [Micromonospora aurantiaca ATCC 27029]
          Length = 265

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 74/301 (24%), Gaps = 69/301 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    L  +      D+V LQE    +     
Sbjct: 1   MRLATWNVN----------------SVKARLPRLLDWLATTKPDVVCLQETKCPDGA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +     ++     +AV  +              +  F     R
Sbjct: 42  -------FPVAEVGELGYEVASHSDGRWNGVAVLSRVGLADVTVG--FPGEPGFPEPEAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +     ++ V  +++ +    D     Y  +          L+D +  +    +
Sbjct: 93  A-----ISATCDELRVWSVYVPNGRAPDDPHYAYKLA------WFAALRDALEPEVAGAL 141

Query: 204 PFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANK 249
           P  + GDFN         D                      +  L           +   
Sbjct: 142 PVAVCGDFNVAPTDADVWDPALFVTSTHVTPAERAALAALRDLGLKDVVPTPMKGPHPFT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +         + ID      +  +              D    +GK  SDH PI +
Sbjct: 202 YWDYRAGMFHQNKGMRIDLVYASASFARA-------VRSAYVDREARKGKGPSDHAPIVV 254

Query: 301 D 301
           D
Sbjct: 255 D 255


>gi|170736096|ref|YP_001777356.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
 gi|169818284|gb|ACA92866.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
          Length = 620

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 83/315 (26%), Gaps = 47/315 (14%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEM 74
            VR+VS+N+ N  +       +     R              +    + L AD++ L E+
Sbjct: 298 DVRIVSFNVFNYFNGDGHGGGFDAPGNRGAKTPAAFARQEAKIVASLRALRADVIGLMEI 357

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            +         +          R ++    R   + I  A+    + V  + ++  +   
Sbjct: 358 ANNGHGDTSAIRRLAAQLGDGWRAVDPGTARLGRDAIAVALLYDSRTVEPVGRAVTVALG 417

Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----- 186
                    R  +          +   V   HLKS     +       S           
Sbjct: 418 GRH------RPPLAQTFRRIDGTRTFTVAVNHLKSKNCPHASGANLDQSDGQGCWNAART 471

Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             A  + DW+       +    ++ GD N             +T++         +    
Sbjct: 472 RAAARVADWLATSPTGIAADGVLLIGDLNSYAKEDP-----LRTLEARGYANLVVRFVGD 526

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----------------- 286
              +         +D+ +        +    F  I  +E  +                  
Sbjct: 527 AAYSYVFRGEAGNLDHALATPALAARVKAVRFWHINADEPVVLQPVPDYKTSAQRSAYYA 586

Query: 287 SRGKRLSDHCPISID 301
               R SDH P+ ID
Sbjct: 587 PDAYRSSDHDPVVID 601


>gi|332284249|ref|YP_004416160.1| putative exodeoxyribonuclease III [Pusillimonas sp. T7-7]
 gi|330428202|gb|AEC19536.1| putative exodeoxyribonuclease III [Pusillimonas sp. T7-7]
          Length = 262

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L                      +  + +N   + + LQE+   +     
Sbjct: 1   MKLATWNVNSL----------------KVRLPQVLDWLENSPVEALCLQELKLTDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    +    +  +A+  K      Q   L G +D   R    
Sbjct: 41  ------KFPIDAFTEAGYQACWAGQKTYNGVAIITKVPGTDIQRN-LPGFEDHQQR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +      + V+  +  +   + S +  Y        +    L++W+ Q+ +   
Sbjct: 90  -IIATTLPSPVGDVRVICAYCPNGQAVGSDKYEYK------LKWFLALQEWLEQELQRYP 142

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
              I GD+N   +    +D                 +  +     L    +E +    + 
Sbjct: 143 RLAILGDYNVAPHNDDVHDPKKWEGDVLVSEPERAAFNALLSLG-LTDSFREFEQEEKSF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++      +             D      ++ SDH P+ 
Sbjct: 202 TWWDYRRFAFRRNAGLRIDHVLLSDALKPYCSACVI-------DKAPRNNEQPSDHTPVI 254

Query: 300 IDYDF 304
              DF
Sbjct: 255 ATLDF 259


>gi|283778819|ref|YP_003369574.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
 gi|283437272|gb|ADB15714.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
          Length = 517

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 83/295 (28%), Gaps = 50/295 (16%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           ++   +P  A     +R++S+NI+     +              D   L +   +++ D+
Sbjct: 264 IIVAKLPSQAVAPITLRVLSYNIHHGEGNDR-----------KLDLPRLAKIITSVNPDL 312

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           V LQE+    A +    +       +        +          AI  R K  R     
Sbjct: 313 VLLQEVDQNVARSGKVDQPKVLAELTKMEFCFGSNLALQGGGYGNAILSRYKIERHDNHL 372

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            P L           R  +   + + G+              + +    Y          
Sbjct: 373 LPSLDGG------EQRGVLVAEISLPGR---------APTLRVAATHFDYRGKEDERLAS 417

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             WL + +   KE  V  ++ GD N             +T+    +  +   E ++    
Sbjct: 418 VAWLTEKL--VKEQTVATILGGDLNATRET--------ETLKKLGAHWKIAGETETPTIP 467

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    ID+ +   +    +++    E               SDH PI    
Sbjct: 468 TDKPER--QIDFVLCRPDDAWEVVEVKVLEEPI-----------ASDHLPILAVL 509


>gi|237719046|ref|ZP_04549527.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293371907|ref|ZP_06618311.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|229451824|gb|EEO57615.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292633153|gb|EFF51730.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 257

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 87/301 (28%), Gaps = 51/301 (16%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           K ++ +  F     ++ AQ ++++S+N             + S + T         + + 
Sbjct: 6   KPIVWVCLFFFAYQSTYAQALKIMSYN------------CRMSGQMTGYSVKEYAVFIRK 53

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            + D+V LQE+       K     T          +     D+    +  +A+  K   V
Sbjct: 54  YNPDVVMLQEIDYNTKRNKNQDFTTQLAAELGLFSVFGKAMDTGGGEY-GVAILSKYPFV 112

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                     +        R  + + ++  G    V+ I          L         +
Sbjct: 113 ---YINNKTFEGIDGAKEPRTLLYVDIQEPGTS-DVIRIGTTHLDHSTDL---------I 159

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            S  A+ + + I        P ++ GDFN + +     +                +    
Sbjct: 160 RSAMAEQINERIGT---GDTPTLLGGDFNARTDSNVICEVMKNW-----------QRICD 205

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   +  I IDY          +   SF  +             +SDH  +  + +
Sbjct: 206 DTFTYPADQPTIKIDYIFGLPQNKWKVK--SFKVLS---------NPEVSDHRALFAEVE 254

Query: 304 F 304
           F
Sbjct: 255 F 255


>gi|126657241|ref|ZP_01728407.1| hypothetical protein CY0110_24971 [Cyanothece sp. CCY0110]
 gi|126621512|gb|EAZ92223.1| hypothetical protein CY0110_24971 [Cyanothece sp. CCY0110]
          Length = 652

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/328 (11%), Positives = 91/328 (27%), Gaps = 66/328 (20%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V    S   K+ + + N+  L   +   L             L+    K+   DI+ L E
Sbjct: 109 VTNLLSGEDKLTVAAMNVENLDPGDSDRLNPLGK--------LIVNNLKS--PDIIVLTE 158

Query: 74  MGSYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           +   +                     +      + I +      +        +I     
Sbjct: 159 IQDNDGPNNSDITDGTETYNALIDAIEKADGPDY-IAFDIPPSDDKDGGQPGGNIRVGYL 217

Query: 116 VRKKNVRVLQQSY------------------PLLGAKDSFSRAGNRRAVELLVEINGKKI 157
            +   V +   +                   P     D+ +   +R+ +    + N   +
Sbjct: 218 YQPARVALTPGTVGTATDTVTVLEGPTLSLNPGRIEPDNGAFKNSRKPIVAEFQFNQNPL 277

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
           +++  H  S    +          +   +QA  + +++     ++     ++AGD N  I
Sbjct: 278 FIIGNHFVSQRGGND---------AKREKQATAVGNFVKTLLSEDDKANVIVAGDLNDVI 328

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
           +           ++ +           S     +   N   +DY ++  N +     +  
Sbjct: 329 DSEPI-----AILEASGLTNLSELLPPSDRYTYEFRNNLQQLDYILVSDNLFTTGKSQFD 383

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  +  +     LSDH P+   + 
Sbjct: 384 IVH---VNVNQPSNLALSDHDPVLAQFT 408


>gi|149185250|ref|ZP_01863567.1| hypothetical protein ED21_19392 [Erythrobacter sp. SD-21]
 gi|148831361|gb|EDL49795.1| hypothetical protein ED21_19392 [Erythrobacter sp. SD-21]
          Length = 265

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 82/303 (27%), Gaps = 66/303 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ ++NIN                   +    L ++ +     +  LQE+ +   + +
Sbjct: 4   SMKIATFNING----------------IKARLPRLLEWLEETRPTVACLQEIKT---MDE 44

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP   +         I +            +A+         +   +    D       
Sbjct: 45  GFPAEEF-------EKIGYQAIWHGQKSFNGVAILSDG----TKPVEIQRGLDIDGPKEG 93

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +E     I + +++L +       +  Y  +        + L+  + Q     
Sbjct: 94  EGEQARYLEAEVNGIRICNLYLPNGNPHPGPKFDYKLA------WMEKLRGRMAQIWAEE 147

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           VP V+ GDFN                       + D + + +    +             
Sbjct: 148 VPAVVLGDFNVIPEDKDVWSPKAMASDALMQPESRDAYRRFLANGWTDAIDTLNPRGGVW 207

Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              + +           ID+ ++       ++           D      ++ SDH P+ 
Sbjct: 208 TYWDYQAGAWQRDHGFRIDHLLLSPETADRMVSAGV-------DKEYRGREKSSDHTPVW 260

Query: 300 IDY 302
           ++ 
Sbjct: 261 VEL 263


>gi|326777965|ref|ZP_08237230.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326658298|gb|EGE43144.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 295

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 85/291 (29%), Gaps = 55/291 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81
            +R+ ++NI+  +  +GV            D        + L AD++ LQE+  +     
Sbjct: 43  PLRVATYNIHAGAGVDGVF-----------DLDRQTAELRALRADVIGLQEVDRHWGDRS 91

Query: 82  -------KVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGA 133
                  ++  +    + ++    ++ ++       +  A+  R + V         L  
Sbjct: 92  EWRDLAGELARRLRMHVSFAPIYSLDPARPGDPRKEYGVAVLSRYRIVSAENHEITRLST 151

Query: 134 KDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +D            E++V + G  + V   HL            Y P  ++   Q    +
Sbjct: 152 QDPNPAPAPAPGFGEVVVRVRGLPVHVYTTHL-----------DYRPDPAVRVAQVADTR 200

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             + + +    P ++ GDFN +          W+ +   D                    
Sbjct: 201 RIMAEDRG---PKILLGDFNAEP-SAPELAPLWRELADADP----------GAPTFPAQD 246

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ID+  + +                            SDH P+  D  
Sbjct: 247 PVKRIDFVAVSRGGPG---------TGITVRKAWVPESVASDHRPVVADLS 288


>gi|294643627|ref|ZP_06721429.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294808046|ref|ZP_06766819.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|292641004|gb|EFF59220.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294444687|gb|EFG13381.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 296

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 80/288 (27%), Gaps = 47/288 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL S+NI T  ++          K        L    +    D+  +QE  +   +  +
Sbjct: 42  IRLASYNIRTKGDKGD--------KSWEVRLNALVDVVRRNKFDMFAIQEGRTSQ-LKDM 92

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKD----SFS 138
              N +             +   N   H AI  +K   +VL+   +      D     + 
Sbjct: 93  MILNEYSYI-------GRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWG 145

Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R       +    GKK +V + H                S  +L +Q + +     
Sbjct: 146 ARCRRICTWGYFKDLRTGKKFYVFNSHT-----DHEATEARRQSSFMLLEQVRKIAK--- 197

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
                  P    GDFN   +          ++  +         K    +     +    
Sbjct: 198 -----GRPTFCTGDFNATPDEEPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAYDKTGKT 252

Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ID+  +                 +  DD     K  SDH P+ ++
Sbjct: 253 AKRIDFIFVTPKIKILS--------YHTIDDDIKYNKYSSDHFPVMVE 292


>gi|218530191|ref|YP_002421007.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum
           CM4]
 gi|218522494|gb|ACK83079.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum
           CM4]
          Length = 264

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 81/303 (26%), Gaps = 64/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  +      D+V LQE+   +A    
Sbjct: 1   MRITTWNVN----------------SIKQRVGHLLGFLDEAKPDVVCLQELKCQDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++        +  +A+  +    LQ +  L G          R
Sbjct: 41  ------SFPREEIEAAGYAVETLGQKAYNGVALLVRAP--LQYTQLLRGLPGDAEDEQAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L+       + V  I+L +       + +Y  +          L+        +  
Sbjct: 93  YIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMAR------LRAHARALMTTEE 146

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+AGDFN                           F   +    +      E  +    
Sbjct: 147 ALVLAGDFNVIPEPEDAADPSVWTQDALFLPEPRRAFRALLAEGFTDGLRACEPSAGLYT 206

Query: 248 NK------NLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                     RN+   ID+ ++   A   L+  S               ++ SDH P+++
Sbjct: 207 FWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSASVQRH-------LRGLEKPSDHVPVTV 259

Query: 301 DYD 303
           +  
Sbjct: 260 ELS 262


>gi|170759835|ref|YP_001786903.1| exodeoxyribonuclease III [Clostridium botulinum A3 str. Loch Maree]
 gi|169406824|gb|ACA55235.1| exodeoxyribonuclease III [Clostridium botulinum A3 str. Loch Maree]
          Length = 253

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 82/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ SWN+N L      +                 ++      DI+ +QE  +       
Sbjct: 1   MRIYSWNVNGLRAVAKKNF---------------IEWIGEESPDILCIQETKLQENQLED 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   + +  ++S           +    ++ +A   K   +  +    +   DS  R  
Sbjct: 46  NIKNIDGYYSYFS----------FAAKKGYSGVATYTKVKPISVKHSMGIEKFDSEGRI- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    K   +L+I+  +    +                 + L ++  +  + 
Sbjct: 95  --------LITEFKNFTLLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVKE 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247
               VI GD+N   N +   +            I+ +       +               
Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIK 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY  +  N    +        +Y            SDHCP+
Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPV 248

Query: 299 SIDY 302
            ++ 
Sbjct: 249 MLEL 252


>gi|332981666|ref|YP_004463107.1| Endonuclease/exonuclease/phosphatase [Mahella australiensis 50-1
           BON]
 gi|332699344|gb|AEE96285.1| Endonuclease/exonuclease/phosphatase [Mahella australiensis 50-1
           BON]
          Length = 287

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 81/290 (27%), Gaps = 51/290 (17%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++   ++    + ++++NI+   +  G             +   + Q  +   A I+ LQ
Sbjct: 41  MMASASATQNGITVMTYNIHHGRDMSG-----------RDNLDSIVQEIRLSGAQIIALQ 89

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+         F      I         + K      I    AV      + +++  L G
Sbjct: 90  EV-DRYMPRSGFKDQVKYIADQLSMYYAYGKTIDILSIEYGNAVISAFPILKRENIILPG 148

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +         R  ++  + +      V   HL                     +Q   + 
Sbjct: 149 SSI-----EPRALLKTEIAVGNDIYNVWATHLGLLRED-------------RFKQIDAIN 190

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             + Q      P ++ GDFN   +    +D   +       +     + D+   A  +  
Sbjct: 191 AALAQ---ESKPTILLGDFNNICSSDEISDISDRL----KDVAALLGKGDAGTYAYGDNA 243

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + IDY  +  +                  +       LSDH  +    
Sbjct: 244 PNVRIDYIWVTDDILP--------------VEYHVNLLGLSDHASVVAKL 279


>gi|150007859|ref|YP_001302602.1| hypothetical protein BDI_1219 [Parabacteroides distasonis ATCC
           8503]
 gi|255013440|ref|ZP_05285566.1| hypothetical protein B2_06000 [Bacteroides sp. 2_1_7]
 gi|298376780|ref|ZP_06986735.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           3_1_19]
 gi|149936283|gb|ABR42980.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|298266658|gb|EFI08316.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           3_1_19]
          Length = 353

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 66/297 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + V+++++N+N  +                     +  + +  D DIV LQE    +A+ 
Sbjct: 98  EAVKVITYNVNNFNTDG------------KKQLPNIADWLRKEDPDIVCLQECPVESALR 145

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                        T   + +     +       A+  K   +  +S     + +      
Sbjct: 146 -------MDSVAKTLSFLPYYCSTRSATKAAGNAIFSKYPILRFESILYPESSNKS---- 194

Query: 142 NRRAVELLVEINGKKIWVLDIHLK-----------SFCFLDSLENTYSPSCSLLSQQAQ- 189
               +  +++I G  + V + H +                +  +   + +   ++ Q + 
Sbjct: 195 ----LFAVMDIQGDSVRVFNNHFQTTSVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKK 250

Query: 190 ------WLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    D+I Q  ++   P +I GDFN                   D    F     
Sbjct: 251 NFVKRATQADYIRQMLDAGEGPVIICGDFNDTPASYTYRTV------KGDLTDGFRDCGS 304

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 + L+    IDY +   +              +      S     SDH P+ 
Sbjct: 305 GFGYTFRQLKRIFRIDYIIYSPD--------------FKGVTYDSPNLDYSDHKPVV 347


>gi|39940404|ref|XP_359739.1| hypothetical protein MGG_05038 [Magnaporthe oryzae 70-15]
 gi|145010717|gb|EDJ95373.1| hypothetical protein MGG_05038 [Magnaporthe oryzae 70-15]
          Length = 307

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 72/310 (23%), Gaps = 32/310 (10%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSDYTLLR 58
            L   +    A  +  +R+V+WNI   +           +       S  R    Y  L 
Sbjct: 6   LLFGLVAAEAAMASLPLRVVTWNIRYAASSLEQGEKPWFDIFCWATKSRCRQYKFYDKLN 65

Query: 59  QYAKNL---DADIVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           Q   +       ++ +QE+             + W            +   S     T+ 
Sbjct: 66  QIVSSTPNGAPMVIGMQEVLDNQLNDIQNSLGDGWAHIGVGRDDGKKAGEYSPIFYQTSQ 125

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
                +        P       +     R     + E        +  +           
Sbjct: 126 LRVLASETKWLSPTPD-SVSFGWGAGSRRIVTTAVFEHIATGEKFIHANTHLDNVSAQAR 184

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
           +          Q A+             +P  + GDFN                   +  
Sbjct: 185 SEGIKVVLTRIQAAR--------VAFGPLPVSLTGDFNSAPYADAFKTLADTGFMKGELY 236

Query: 235 IRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                 + +          +       ID+  +            +S + Y   D    G
Sbjct: 237 DLATPAQHAGPYTTTYTTFREGAGESRIDFIWLGAA-----QNYPYSVVKYEIWDHTVDG 291

Query: 290 KRLSDHCPIS 299
            R+SDH P+ 
Sbjct: 292 MRVSDHRPVV 301


>gi|89068210|ref|ZP_01155620.1| exodeoxyribonuclease III [Oceanicola granulosus HTCC2516]
 gi|89046127|gb|EAR52185.1| exodeoxyribonuclease III [Oceanicola granulosus HTCC2516]
          Length = 264

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 71/305 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
            +++ ++NIN                   + +  L  +    D D+V LQE+     N  
Sbjct: 4   SMKIATFNING----------------IKARHQSLLAWLDEADPDVVLLQEIKSIDENFP 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +++F +  + +                      +A+  K               D  +R 
Sbjct: 48  SELFEEKGYNVATH------------GQKGFNGVAILSKLPLEDVSRGLPGDDTDEHARW 95

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +E  V      I +  ++L +       +  Y  +        + L     +  E
Sbjct: 96  -----IEATVVGEHAAIRLCGLYLPNGNPAPGPKYDYKLA------WMERLHARAAELME 144

Query: 201 SLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRC 245
           +  P ++AGD+N                           W+ +        F  +  +  
Sbjct: 145 AEEPAIMAGDYNVIPQPEDAARPKAWVKDALFLPQTRRAWRRLLNLGFTEAFRAKTLAAG 204

Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           + +                ID+ +M   A   +            D       + SDH P
Sbjct: 205 HYSFWDYQAGAWQKNDGIRIDHVLMTPQAADLMRDVWI-------DSAVRGRDKPSDHVP 257

Query: 298 ISIDY 302
           + +D 
Sbjct: 258 VVVDL 262


>gi|328354255|emb|CCA40652.1| CCR4-NOT transcription complex subunit 6 [Pichia pastoris CBS 7435]
          Length = 743

 Score = 92.7 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 92/324 (28%), Gaps = 43/324 (13%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76
               ++++N      + ++      +           L++   +L  DI+ LQE+     
Sbjct: 398 NTFTMMTYNTLCQHYATKKMYRYTPSWALDWDYRRERLKEQILDLQTDIICLQEVEHKTF 457

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +    +   + +   +  +      K  S       A   R    + +++ +   G   
Sbjct: 458 DDFWQPIMLSHGYKGIFHVKSRAKTMKESSAYKVDGCATFYRTSKFQAVERKHFEYGRIA 517

Query: 136 SFSRAGNRR---------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  +                 + L    +G K+ V + HL      +         
Sbjct: 518 MSQDKFKKTEDLFNRFLNKDNIASVLILEHIPSGNKLVVANTHLHWDPEFND--VKTMQV 575

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             LL +    ++  ++ K  + VP +I GDFN K++          T+D ++ +I     
Sbjct: 576 GVLLDELQAVIRKHLSPKDITKVPLLICGDFNSKVHSAVYQLFSQGTVDKHEDIIGRDYG 635

Query: 241 KDSRC-------------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILY 280
           K +                       N +      IDY      +     +         
Sbjct: 636 KFTEEGFRHPFHLQSSYDSIGELPYTNVSPTFTDVIDYIWYSTPSLSVKGVLGQVDPDYS 695

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
                       SDH P+   + F
Sbjct: 696 KNIIGFPNADFPSDHIPLLSTFMF 719


>gi|126727467|ref|ZP_01743301.1| Endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium
           HTCC2150]
 gi|126703247|gb|EBA02346.1| Endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium
           HTCC2150]
          Length = 334

 Score = 92.7 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/333 (10%), Positives = 86/333 (25%), Gaps = 53/333 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDY--------TLLRQYAKNLDADIVFLQEMG 75
           +R+ ++N+   +          +    +  Y          L    + +DAD + + E  
Sbjct: 1   MRIATYNVEWFNALFDDDGQMINDASWSKRYNVTKAQQTAALGAVFQAMDADAIMVIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-------- 127
             +              +   R  +     SN+     I +   +V     +        
Sbjct: 61  DSHRGRDGVYALEGFAAHFGLRARSGVIGYSNDTQQEIILMYDPDVLQASHAPQASDAAP 120

Query: 128 -------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--S 178
                    L           ++  +E+          ++ +H KS     +        
Sbjct: 121 SFEEEFKLDLDLDSHPDPIVFSKPPLEVSAVKGDFAFNLIGVHAKSKAPHGASNPKEVMQ 180

Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226
            S     +Q      L+  + +   +  P ++ GDFN           F +         
Sbjct: 181 ISIQNRRKQLAQCIWLRARVAEHLAAKTPLIVLGDFNDGPGLDEYERLFGRSGVEIVLGE 240

Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKNL------RNKIPIDYFVMDQNAYKFLIQESF 275
                 +    +     +   +    ++             +DY ++  +  +       
Sbjct: 241 GADDEKLYDPHAQRALSQRLPANFTTSRFFLRHEKRYLSALLDYIMVSSDLKEKNPAWHI 300

Query: 276 SEILYNEDDIKSRGKR-----LSDHCPISIDYD 303
                +         R      SDH P+++D D
Sbjct: 301 WHPFDDPACYGDLNLREALLAASDHFPVTLDID 333


>gi|254476088|ref|ZP_05089474.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11]
 gi|214030331|gb|EEB71166.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11]
          Length = 331

 Score = 92.7 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 100/329 (30%), Gaps = 49/329 (14%)

Query: 24  VRLVSWNINTLSE----QEGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVFLQEMG 75
           +RLV++N+   S      + + L      R   D       L +    LDAD + + E  
Sbjct: 1   MRLVTYNVEWFSALFDRADRLVLDGKLSGRHGIDRATQARALAKVFTALDADGIMVIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--------- 126
             N+  +           +  R        SN+       +   +V              
Sbjct: 61  DTNSRQQSVRALEHFAAEAGLRAREAISGFSNDTQQEITFLYDPDVMDAVHTPGQNDAAP 120

Query: 127 ------SYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT--- 176
                    L         A ++  +EL V+   G  + ++  HLKS     +       
Sbjct: 121 RFDGVFHIDLDIDAQKDEVAFSKPPLELTVKTKGGTSLALIGAHLKSKAPHGARTPAAVT 180

Query: 177 --YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226
                +      QA WL+  I Q+       ++ GD N           F +        
Sbjct: 181 TLSIANRRKQLAQAIWLRRRIDQRLAEGQDVIVLGDLNDGPGLDQYEKLFNRSSVEIVMN 240

Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY----KFLIQESF 275
               DP+   +  P+ +     A              +DY ++         ++ I   F
Sbjct: 241 SDLHDPHAQSLLAPRLRVLPSTARFYNKETRRYFSALLDYIMLSPGLMRHQPRWRIWHPF 300

Query: 276 SE-ILYNEDDIKSRGKRLSDHCPISIDYD 303
            +   Y +  ++    + SDH P+S+D D
Sbjct: 301 EDAACYEDAPLREALLQASDHFPVSLDID 329


>gi|290962564|ref|YP_003493746.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces
           scabiei 87.22]
 gi|260652090|emb|CBG75222.1| putative endonuclease/exonuclease/phosphatase family protein
           [Streptomyces scabiei 87.22]
          Length = 295

 Score = 92.7 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 83/304 (27%), Gaps = 35/304 (11%)

Query: 6   VLALVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +L      +P  A   A  + ++++N+         +   +   R T    ++R+  +  
Sbjct: 19  LLTTAGSSLPAAAGEYAGALNVMTFNVRF-------ATVVDKTPRWTVRRPVMRELLRRE 71

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
              ++  QE                  +  T R              T      +     
Sbjct: 72  RPHVIGTQEGLYQQLRMIEKDLGGHYDWIGTGRGGGSKDEFMAIFYDTRRLDPIEFDHYW 131

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
               P   A +++     R    +        G++ +VL+ HL             S S 
Sbjct: 132 LSDTPYTIASNTWGADWLRMVTWVKFADLADGGREFYVLNTHL------------DSVSQ 179

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKE 240
               + A+ + + I    +   P V+ GDFN   +     +      +            
Sbjct: 180 YARERSAKLVGETIAGW-DRSAPVVVTGDFNAAAHDNRVYELMLGNGLVDAWDAAASRSP 238

Query: 241 KDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +  + L+     ID+ +              +      +     G   SDH P+ 
Sbjct: 239 AYGTYHGYRALKPDGRRIDWILTSP---------GVTTHWAAMNTFSVDGLYPSDHLPVQ 289

Query: 300 IDYD 303
           +   
Sbjct: 290 VSLT 293


>gi|187779869|ref|ZP_02996342.1| hypothetical protein CLOSPO_03465 [Clostridium sporogenes ATCC
           15579]
 gi|187773494|gb|EDU37296.1| hypothetical protein CLOSPO_03465 [Clostridium sporogenes ATCC
           15579]
          Length = 253

 Score = 92.7 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 85/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ SWN+N L      +                 ++    + DI+ +QE  +       
Sbjct: 1   MRIYSWNVNGLRAVAKKNF---------------LEWIGEENPDILCIQETKLQENQLED 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   + +  ++S           ++   ++ +A   K   +  +    +   DS  R  
Sbjct: 46  NIKNIDGYYSYFS----------FAHKKGYSGVATYTKEEPISVKHGIGIERFDSEGRI- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    K   +L+I+  +    +                 + L ++  +  E 
Sbjct: 95  --------LITEFKDFILLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVEE 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247
               VI GD+N   N +   +            I+ +       +               
Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKASGFLRIERDWLDKIIERGYIDTFRNMNPDKIK 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY  +  N    +        +Y            SDHCP+
Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPV 248

Query: 299 SIDYD 303
            ++ +
Sbjct: 249 MLELE 253


>gi|307946864|ref|ZP_07662199.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4]
 gi|307770528|gb|EFO29754.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4]
          Length = 260

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 87/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    +  + +  + +I  LQE+ S +     
Sbjct: 1   MKIATWNING----------------VKARLDTVLAWLQEAEPEIACLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++ +         +A+         Q        D  +R    
Sbjct: 41  ------NFPREAIEELGYNVKTHGQKSFNGVALLSNRPLEDVQRGLPGDDSDEQARF--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V  +   + V  ++L +   L + +  Y             L     ++ +  +
Sbjct: 92  --IEGTVSTDNGVVRVGCLYLPNGNPLGTEKFPYK------LGWMDRLIAHAKRRLDDEI 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P+++ GD+N   +               +   +   ++T+             D+     
Sbjct: 144 PYLLLGDYNVIPDPMDAKNPENWGNDALFQPESRQKFRTLTHLGFTEAVRACTDAPETFT 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ ++   A   +            D      ++ SDH P+ +
Sbjct: 204 FWDYQAGAWQKNNGIRIDHILLSPQASDLMAGCGI-------DKHVRGWEKPSDHVPVWV 256

Query: 301 DY 302
           + 
Sbjct: 257 NL 258


>gi|307729190|ref|YP_003906414.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
 gi|307583725|gb|ADN57123.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
          Length = 258

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/303 (8%), Positives = 81/303 (26%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  + +    D++ LQE          
Sbjct: 1   MKIATWNVNSL----------------KVRQQHVIDWLETSRTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  + +  +    + ++  +      F     R
Sbjct: 35  LKLPDEKFPRAELEEKGYRSWFAGQKTYNGVGILVREGISVDETTIVRNIP-GFDDLQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + ++  +  +     + +  Y        +    L DW+  +     
Sbjct: 94  VVAATV-----DGVRIISAYFPNGQAPGTDKFAYK------LRWLAALHDWVQSEMALYP 142

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
              + GD+N   +    +D      + +   +            L+   ++ +       
Sbjct: 143 KLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEFVRLTELGLVDAFRQFEQPEKIYS 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++ +   +              D +  +  + SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSKPLAETCTSCEV-------DKVPRKWDQPSDHAPVVA 255

Query: 301 DYD 303
              
Sbjct: 256 QLS 258


>gi|269960966|ref|ZP_06175335.1| exodeoxyribonuclease III [Vibrio harveyi 1DA3]
 gi|269834185|gb|EEZ88275.1| exodeoxyribonuclease III [Vibrio harveyi 1DA3]
          Length = 268

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 82/309 (26%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q         + +    +
Sbjct: 42  -------FPIEDVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQK-----GFPTDNEEHQK 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +    E   ++     + + +  F       +        Q  + L  ++     +  
Sbjct: 90  RMIMATFEDENEE----KVTVLNGYFPQGDNIAHETKYPYKRQFYKDLMTYLNNHHSNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ +T+        F     
Sbjct: 146 QLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSFQPEEREWLQTLLDWGFEDTFRNLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +   +  K  I+        + D      ++ S
Sbjct: 206 EVDDRFSWFDYRSRGFDDNRGLRIDVILATPSLAKKCIES-------DIDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|319788284|ref|YP_004147759.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
 gi|317466796|gb|ADV28528.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
          Length = 261

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 86/284 (30%), Gaps = 49/284 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK--- 82
           +++ NI+   +                    LR+  + + ADIVFLQE+   +A  +   
Sbjct: 17  VLTANIHMGFDMLQRRFV----------LPRLREAIRRVGADIVFLQEVQGRHADRERSV 66

Query: 83  -VFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +P+     + +        + +       H   A+  +   V   ++ +  A      
Sbjct: 67  HQWPETPQYEYLADTLWPQFAYGRNAVYPHGHHGNALLSRLPIVRHDNHDVSVAGH---- 122

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             NR  +   +E+ G    +  I +                 +    Q   L   + ++ 
Sbjct: 123 -ENRGLLHCELELPGHPQHLHAICVHLGLRD-----------AHRRSQVGLLGALLREQV 170

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            +  P V+AGDFN             + +     +  F +++     +   L   +P+D 
Sbjct: 171 PADAPVVVAGDFNDW------RGAAHRQLLDCGLVEAFEQQRGRLARSFPALLPLLPLDR 224

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +                            RLSDH P+     
Sbjct: 225 IYVRG----------LQVHEVATPRG-RPWTRLSDHLPLHARLS 257


>gi|260641834|ref|ZP_05413661.2| Ser/Thr protein phosphatase family protein [Bacteroides finegoldii
           DSM 17565]
 gi|260624593|gb|EEX47464.1| Ser/Thr protein phosphatase family protein [Bacteroides finegoldii
           DSM 17565]
          Length = 611

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 83/305 (27%), Gaps = 64/305 (20%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M + ++L  V   +    +    +RL+++NI   +  + +             +  +   
Sbjct: 4   MKKIFLLISVILFIFPVQAQ-HTLRLMTYNIKNANGMDDICS-----------FQRVANV 51

Query: 61  AKNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             N   D+V +QE+ S    +    V  +                           I + 
Sbjct: 52  INNASPDVVAIQEVDSMTRRSGQKYVLGEIAERTQMHACFAPAIE----FEGGKYGIGLL 107

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            K V +  Q+ PL G      R   R  +    E      ++      S    D      
Sbjct: 108 TKQVPLRLQTIPLPG------REEARTLILAEFED-----YIYCCTHMSLTEKD------ 150

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                    + + L+   +       P  +AGD N +                 +    F
Sbjct: 151 ---------RMKSLEVVKSFVAPYKKPLFLAGDMNAEPESDFIK----------ELQKNF 191

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               + + +       K  IDY    ++        S   +              SDH P
Sbjct: 192 QMLSNPKQSTYPASDPKETIDYITALKSNANGFALISSQVL---------DEPMASDHRP 242

Query: 298 ISIDY 302
           I ++ 
Sbjct: 243 ILVEL 247


>gi|115351807|ref|YP_773646.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
 gi|115281795|gb|ABI87312.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
          Length = 286

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 83/308 (26%), Gaps = 52/308 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+ WN+    + +GV            D       A+ L D D++ +QE+        
Sbjct: 1   MRLIDWNVQWGRDADGV-----------VDLARTIAAARRLGDFDVLCMQEVTRGFGALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                +   ++         +                     A+  +          L  
Sbjct: 50  GQPGPDQFTELAALLPGYTIFEAIGADLPPLEPDAARRQFGNAIATRLPVGRVLRQLLPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D+   +  R A+E+ +      + ++  HL+ +            +     ++A    
Sbjct: 110 PADASGPSMPRVALEVELTTPSGALRIITTHLEFYSARQ--RLAQVDAMRARHREACAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           D     + +  PF         +I GDFN   +            D    +  +      
Sbjct: 168 DQPAPAENATGPFTATGQARDAIICGDFNSAFDSDAYRRLLEPIADAPSFVDAWVARHAG 227

Query: 244 RC--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     +  +     +  D+  +       + +                  R SDH
Sbjct: 228 HTPPPTAGVYDTAQWSDGPLACDFVFVTDTLLPRVTRCEI-----------DGDVRASDH 276

Query: 296 CPISIDYD 303
            P+ ++ +
Sbjct: 277 QPVVLEVE 284


>gi|308209125|gb|ADO20907.1| deoxyribonuclease-1 [Saccharopolyspora spinosa]
          Length = 272

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 76/312 (24%), Gaps = 70/312 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGS 76
           ++   + + + N+N L                        ++     AD++ +QE     
Sbjct: 5   TLGGVLTVSTVNVNGLRAAAKKGF---------------VEWLAATRADVICMQETRAEP 49

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
               ++V     W    +           S+      +A+  +      +        D 
Sbjct: 50  DQLTSEVREPAGWHTVLAP----------SSAKGRAGVAIYSRAEPAAVRIGFGSAEFDE 99

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R          +++ G  + V  ++L S       ++               L++   
Sbjct: 100 SGR-------YAEIDLPG--VVVASLYLPSGDVGTPRQDEKERFMKEFRAYLGDLRERA- 149

Query: 197 QKKESLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
                    ++ GD+N                   +L     +   +  +       +  
Sbjct: 150 --AAEGREVLVCGDWNIAHQQIDLKNWKSNQKEAGFLPEERAWLTEVFDSGYADVLRRLH 207

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY V                         S  +R 
Sbjct: 208 PEGPGPYSWWSYRGKAFDNDSGWRIDYIVSSPGLASRCTDAYVE-------KAASYDQRW 260

Query: 293 SDHCPISIDYDF 304
           SDH P++  +DF
Sbjct: 261 SDHAPVTAAFDF 272


>gi|229824863|ref|ZP_04450932.1| hypothetical protein GCWU000182_00212 [Abiotrophia defectiva ATCC
           49176]
 gi|229790866|gb|EEP26980.1| hypothetical protein GCWU000182_00212 [Abiotrophia defectiva ATCC
           49176]
          Length = 258

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 94/282 (33%), Gaps = 32/282 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++LV++NI    EQ+G++ +            L+     +   DI+  QE+  + AV 
Sbjct: 2   GDIKLVTFNIRCDYEQDGINNFAFRKP-------LIVDKVNSTQPDIICFQEVLPHVAVW 54

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + I           + +   D   AIA +K    ++  S   +         G
Sbjct: 55  LKATFTDYYIV-------GCGRSEDFADEQEAIAFKKDRFNLVNMSTFWMSETP--YIPG 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R   +        ++ + DI  K+   L +    +  S + L    Q LK    +    
Sbjct: 106 SRYKKQSTCPRVTTEVVLYDIAEKNMFRLLNTHLDHEGSEARLLGLNQLLKKIDEEIIFP 165

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            +P +IAGDFN + +           I                   +   + K  IDY  
Sbjct: 166 DIPVIIAGDFNAEPDSPE----MQAVITSEKYYDLT---AGIDFTFHDYGKTKEKIDYIF 218

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +N      ++               G  +SDH PI +D  
Sbjct: 219 VSRNITCKKTEKWDDVKN---------GVYISDHYPIQVDIS 251


>gi|284053675|ref|ZP_06383885.1| exodeoxyribonuclease III [Arthrospira platensis str. Paraca]
 gi|291570470|dbj|BAI92742.1| exodeoxyribonuclease III [Arthrospira platensis NIES-39]
          Length = 263

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 93/304 (30%), Gaps = 68/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                RT  D   +  + +  D D++ LQE  +   +   
Sbjct: 1   MKIATWNVN--------------SIRTRQD--QVLGWLQGQDIDVLCLQETKVIDQDFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F +  + ++   ++  N            AI  R     ++    P+L A        
Sbjct: 45  SPFEELGYHVYIYGQKAYN----------GVAIFSRLNIESIIMGFTPILSADKVGDLDD 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +R +  +++     I ++++++ +   + S +  Y        Q    L+D++ Q    
Sbjct: 95  QKRVIAGVID----DICIINVYIPNGSSVGSDKYEYK------LQWLNRLRDYLQQMLIK 144

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
                I GDFN         +   +                  N  L    ++       
Sbjct: 145 YPHLCICGDFNIAPEDRDIYNPQNRENHIMASAAERQALDAIANLGLADGFRKFTQDGGH 204

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  +    Y+  I           D       + SDH P+
Sbjct: 205 FTWWDYRAASFTRNRGWRIDHHYLSPGLYENAIACYI-------DTEPRTQPKPSDHAPV 257

Query: 299 SIDY 302
            ++ 
Sbjct: 258 ILEI 261


>gi|229031365|ref|ZP_04187367.1| Exodeoxyribonuclease [Bacillus cereus AH1271]
 gi|228729930|gb|EEL80908.1| Exodeoxyribonuclease [Bacillus cereus AH1271]
          Length = 252

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 86/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQDGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NPEGYYTYW-----------NYAVKKGYSGTAIFSKQEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L        +   
Sbjct: 92  -----VITVEFEGFYMITLYTPNSKRGLERLDYRMKWEDDFRAYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +      +  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTRILEEGFIDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|304383804|ref|ZP_07366262.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           marshii DSM 16973]
 gi|304335060|gb|EFM01332.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           marshii DSM 16973]
          Length = 325

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 85/316 (26%), Gaps = 47/316 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD------- 65
             +V  N   L + +  +   +              R  +    + +   +         
Sbjct: 18  FTVVQLNCENLFDTQHDTGKNDIEFTETGIRHWTFNRYWAKLNGIARTIVSCGKGIDGGA 77

Query: 66  --ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
              D+V L E+ +   +  +  K+            N+    S +     +A+       
Sbjct: 78  ALPDVVALCEVENDTVMTDLTKKSLLRAAGY-----NYVMTHSADRRGMDVALLYSPATF 132

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                              R  + +   +  G  + ++ +H  S    +     Y    +
Sbjct: 133 APIRDCTFRVPPPEGMRPTRDILYVAGRLPAGDTLHIIVVHAPSRMGGEPQTRPYRCKVA 192

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                   + D I ++       +IAGDFN   +         K +          +   
Sbjct: 193 QC---IVAVTDSIRRQSPE-AKILIAGDFNDYSDNEAVRSIVAKGMADVSEHATGKQGAG 248

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR----------- 291
                 +       +D+     +   F+ +   ++  +  +D  + G R           
Sbjct: 249 G---TYRYQGQWGSLDHLFASPSLLPFIQECYINDAPFLTEDDPTYGGRMPHRSFRGTRY 305

Query: 292 ---LSDHCPISIDYDF 304
              +SDH P+ +   +
Sbjct: 306 VGGISDHLPLVVHLRW 321


>gi|301164025|emb|CBW23581.1| putative conserved exported protein [Bacteroides fragilis 638R]
          Length = 344

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 86/326 (26%), Gaps = 56/326 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+V WN     +    SL  +           + +R       + +    +       
Sbjct: 24  PFRVVFWNTENFFDTRHDSLKNDMEFLPHSMRHWNHRRYKKKLDNVARTLTAIGEWNFPA 83

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ L E+ +   +  +     +            +       I  A+  ++   ++L   
Sbjct: 84  LIGLCEVENDTVMRDL---TLYSPLKEAGYRYVMTHCSDLRGIDVALLYQRDRFKLLS-- 138

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           Y  L   +       R  + +  + + G  + ++  HL S             S      
Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGV------RQSEPYRLY 192

Query: 187 QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT------IDPNDSLIRFP 238
            AQ LKD              +I GDFN                            +   
Sbjct: 193 AAQKLKDAADSLINVRPSAKLIIMGDFNDYPTDKSVVQVLQALSPEVSTHHDRLYHLLAR 252

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYK-----FLIQESFSEI--------------- 278
           K KD    + K       +D+ ++           F  ++  +                 
Sbjct: 253 KAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTKEKKANVARLPFLLTKDEKYGGM 312

Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303
             +         +  SDH P+ +D++
Sbjct: 313 QPFRTYVGMKYQEGYSDHLPVYVDFE 338


>gi|163793638|ref|ZP_02187613.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199]
 gi|159181440|gb|EDP65955.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199]
          Length = 258

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 69/282 (24%), Gaps = 57/282 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             VR+++WNI+    Q+G             D   +R+   +L  DI  +QE+       
Sbjct: 2   NSVRVLTWNIHGFLGQDGGF-----------DPERVRRIIADLSPDIAAIQEVVGPECGV 50

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                    +  +     N  +R           +  +                S  R  
Sbjct: 51  DGAAVLRASMPGADAIEANVERRIEGI---YGQMLLSRFPVR-----HWTKVDISVERRE 102

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            RRA++ +++  G  + V+  HL                      Q   L   +    + 
Sbjct: 103 PRRAIDAVLDAPGGPMRVICTHLGLTGS-------------ERRLQVGALCRLLD--ADP 147

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            +  ++ GD N         D     +               R            +D   
Sbjct: 148 RIDTLVLGDIN---------DWRIGGVSERCLAPVLGAGTRHRTYPAAFPVFP--LDRIW 196

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                  +       SDH P+  D  
Sbjct: 197 FRP------------VERVIRTRVVREAGLASDHLPVVADIS 226


>gi|317473851|ref|ZP_07933131.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii
           1_2_48FAA]
 gi|316909928|gb|EFV31602.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 372

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/349 (10%), Positives = 87/349 (24%), Gaps = 62/349 (17%)

Query: 8   ALVFFLVPCTASV-------AQKVRLVSWNINTLSEQEGVSLWKNSVK-----------R 49
           ALVF     +A +           R++ +N+  L +    +L  +              +
Sbjct: 28  ALVFLAFLSSAPLYGQIKKDTLTFRIMGYNVENLFDCRHDTLKNDYEFLPDAVRHWNYFK 87

Query: 50  TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
                  + +    +       +V L E+ + + +  +     + I          +   
Sbjct: 88  YKKKLDAIARVIIAVGKWTPPALVALCEVENDSVLHDL---TRYSILREAGYRYVITHSP 144

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHL 164
               I  A+  ++   ++L     L       S    R  + +  + +N   + V   H 
Sbjct: 145 DERGIDVALLYQRGMFKLLSNQ-SLPVTGLHKSSRPTRDILHVSGLLLNRDTLDVFVAHF 203

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
            S          Y    +   + A      +    +     +I GDFN            
Sbjct: 204 PSRSGGAKASEPYRLLAAQRLKNATDSLFHVRTHPQ----IIIMGDFNDYPGNKSVQKIL 259

Query: 225 WKT--------IDPNDSLIRFPKEKDSR--CNANKNLRNKIPIDYFVMDQNAYKFLIQ-- 272
                      +          ++  +     + K       +D+ ++  N         
Sbjct: 260 KAGMPPAETDSLKSQMLYHLLARKSAANKHFGSYKYQGEWGLLDHIILSGNLLTATSPLY 319

Query: 273 -------------------ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                              +      +            SDH P+  ++
Sbjct: 320 TAEDKADVFHAPFLLTEDKKYGDNQPFRTYYGMKYQAGYSDHLPVWAEF 368


>gi|303328283|ref|ZP_07358721.1| exodeoxyribonuclease III [Desulfovibrio sp. 3_1_syn3]
 gi|302861613|gb|EFL84549.1| exodeoxyribonuclease III [Desulfovibrio sp. 3_1_syn3]
          Length = 268

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 87/308 (28%), Gaps = 71/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L        W               ++    DA IV LQE        K 
Sbjct: 3   IKLVSWNVNGLRALSAKPEW---------------EWFARTDAQIVALQE-------TKA 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+       S E    H         ++ +AV  +   +  ++       D   +   R
Sbjct: 41  HPEQLKEELASPEGWEAHWSSSHVKKGYSGVAVFSRMTPLAVRA----ELPDPQWQGEGR 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL----SQQAQWLKDWITQKK 199
                 + +        + +  +    +  EN                 +   ++  + +
Sbjct: 97  L-----LHLEFPDFHFFNGYFPNGGAEELDENGKPTGRFKRVPYKMGFFEAFLNYAEECR 151

Query: 200 ESLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           +S  P V+ GDFN                   +L     F         +  F K    +
Sbjct: 152 KSK-PIVVCGDFNIAHQAIDLARPKQNVKNTGFLPEERAFLDRFTAMGYVDTFRKVHGDQ 210

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +       K           IDYF + +     +        +Y            SDH
Sbjct: 211 PDQYSWWSYKTRAREKNIGWRIDYFFVSEELAPAVSDAWIENNVY-----------GSDH 259

Query: 296 CPISIDYD 303
           CP+ ++ +
Sbjct: 260 CPVGLELE 267


>gi|183980766|ref|YP_001849057.1| exodeoxyribonuclease III protein XthA [Mycobacterium marinum M]
 gi|183174092|gb|ACC39202.1| exodeoxyribonuclease III protein XthA [Mycobacterium marinum M]
          Length = 276

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 71/307 (23%), Gaps = 66/307 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +RL +WN+N                   +    +  + +  D D++ +QE    +   
Sbjct: 4   GTLRLATWNVN----------------SIRTRLPRVLDWLERADVDVLAIQETKCSDT-- 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                            + +       +    +A+  +      Q         S     
Sbjct: 46  --------QFPALPLFELGYEVAHVGFNQWNGVAIASRVGIDDVQIGFDGQPAWSGKPEV 97

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-- 199
              A    V      + V  +++ +   L+    TY             L+D        
Sbjct: 98  AAAAEARAVGATCGGVRVWSLYVPNGRALEDPHYTYKLD------WLAALRDTAQCWLKN 151

Query: 200 ESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           +   P  +AGDFN                           +  I                
Sbjct: 152 DPGAPIALAGDFNIAPTDEDVWSTEFFTGATHVSEPERKAFNAIVDAQFTDLVRPFTPGP 211

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                ID+ +        ++              + +GK  SDH
Sbjct: 212 -GVYTYWDYTQLRFPKKQGMRIDFILGSPALAGRVVDAQIV-------RDERKGKAPSDH 263

Query: 296 CPISIDY 302
            P+ +D 
Sbjct: 264 APVFVDL 270


>gi|53714527|ref|YP_100519.1| hypothetical protein BF3240 [Bacteroides fragilis YCH46]
 gi|52217392|dbj|BAD49985.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 344

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 84/326 (25%), Gaps = 56/326 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+V WN   L +    SL  +           + +R       + +    +       
Sbjct: 24  PFRVVFWNTENLFDTRHDSLKNDMEFLPHSMRHWNHRRYKKKLDNVARTLTAIGEWNFPA 83

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ L E+ +   +  +     +            +       I  A+  ++   ++L   
Sbjct: 84  LIGLCEVENDTVMRDL---TLYSPLKEAGYRYVMTHCSDLRGIDVALLYQRDRFKLLS-- 138

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           Y  L   +       R  + +  + + G  + ++  HL S             S      
Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGV------RQSEPYRLY 192

Query: 187 QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT------IDPNDSLIRFP 238
            AQ LKD              +I GDFN                            +   
Sbjct: 193 AAQKLKDAADSLINVRPSAKLIIMGDFNDYPTDKSVVQVLQALSPEVSTHHDRLYHLLAR 252

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-------------------- 278
           K KD    + K       +D+ ++              E                     
Sbjct: 253 KAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTEEKKANVARLPFLLTKDEKYGGM 312

Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303
             +         +  SDH P+ +D++
Sbjct: 313 QPFRTYVGMKYQEGYSDHLPVYVDFE 338


>gi|298491351|ref|YP_003721528.1| endonuclease/exonuclease/phosphatase ['Nostoc azollae' 0708]
 gi|298233269|gb|ADI64405.1| Endonuclease/exonuclease/phosphatase ['Nostoc azollae' 0708]
          Length = 256

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/286 (10%), Positives = 69/286 (24%), Gaps = 42/286 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+ ++S+N+       GV        +       +    ++   D++  QE  +      
Sbjct: 2   KITVMSFNLRYDKPDSGVR-------QWEKRIGAIASVIQHYQPDLIGTQEGKTPQLSNL 54

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDS 136
                 +             +  +    H A+    + + + Q         P +    +
Sbjct: 55  QALLPEYKFI-------GGDRTGTGEGEHCAVFYNPQRLELQQTKDFYLSDTPEIPGSIT 107

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +     R A      +    I +  ++                +       A  +   + 
Sbjct: 108 WDTRLPRMATWANFTVGNPSISLTIVNTHL----------DHENAKARELGAALVILRLM 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +        ++ GDFN     L            +        ++               
Sbjct: 158 EFPSEDY-LLLTGDFNANPTTLARMILADNYKIQDALATLPLDKQK--TFHEFTGEAWDA 214

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID    D+          F       D  +      SDH P+ +  
Sbjct: 215 IDTIYCDRR---------FQIEQVIIDRQQWEDIWPSDHFPVIVKL 251


>gi|153937900|ref|YP_001390827.1| exodeoxyribonuclease III [Clostridium botulinum F str. Langeland]
 gi|168180137|ref|ZP_02614801.1| exodeoxyribonuclease III [Clostridium botulinum NCTC 2916]
 gi|170757676|ref|YP_001781117.1| exodeoxyribonuclease III [Clostridium botulinum B1 str. Okra]
 gi|226948816|ref|YP_002803907.1| exodeoxyribonuclease III [Clostridium botulinum A2 str. Kyoto]
 gi|152933796|gb|ABS39294.1| exodeoxyribonuclease III [Clostridium botulinum F str. Langeland]
 gi|169122888|gb|ACA46724.1| exodeoxyribonuclease III [Clostridium botulinum B1 str. Okra]
 gi|182668909|gb|EDT80885.1| exodeoxyribonuclease III [Clostridium botulinum NCTC 2916]
 gi|226843845|gb|ACO86511.1| exodeoxyribonuclease III [Clostridium botulinum A2 str. Kyoto]
 gi|295318896|gb|ADF99273.1| exodeoxyribonuclease III [Clostridium botulinum F str. 230613]
 gi|322805797|emb|CBZ03362.1| exodeoxyribonuclease III [Clostridium botulinum H04402 065]
          Length = 253

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 82/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ SWN+N L      +                 ++      DI+ +QE  +       
Sbjct: 1   MRIYSWNVNGLRAVAKKNF---------------IEWIGEESPDILCIQETKLQGNQLED 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   + +  ++S           +    ++ +A   K   +  +    +   DS  R  
Sbjct: 46  NIKNIDGYYSYFS----------FAVKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRI- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    K   +L+I+  +    +                 + L ++  +  + 
Sbjct: 95  --------LITEFKDFTLLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVKE 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247
               VI GD+N   N +   +            I+ +       +               
Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIK 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY  +  N    +        +Y            SDHCP+
Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPV 248

Query: 299 SIDY 302
            ++ 
Sbjct: 249 MLEL 252


>gi|291298431|ref|YP_003509709.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290567651|gb|ADD40616.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 278

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 82/286 (28%), Gaps = 53/286 (18%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R   +NI+  +  + V            D   + +  + L+ D++ LQE+  +   +   
Sbjct: 40  RFGCFNIHHGASPDDVM-----------DLERIARRIEALNCDVIGLQEVDRFWKRSGFV 88

Query: 85  PKNTWCI------FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +  W              L    +           AV  +      ++  L  + D   
Sbjct: 89  DEPAWLAERLGLEVAFGANLDLAPEEPGRPRRQYGTAVLSRWPIAESENTLLPKSGDD-- 146

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  +  +++  G      + HL+                S+   QA+ + + +   
Sbjct: 147 --EQRGLLRTVLDAPGGAFVFANTHLQHGT-----------DESVRVAQAELIIEILG-- 191

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            ++    V+ GDFN +      +      +  N     +    D       +      ID
Sbjct: 192 -DAPQRTVLVGDFNAEPGAESID------VIANRLPDAWAAAGDGDGLTYPSDNPHARID 244

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +     +     +     +               SDH P+S  + F
Sbjct: 245 FVFAAPDVKPAAMAVDAEDPS------------ASDHLPLSGTFAF 278


>gi|254292391|ref|YP_003058414.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814]
 gi|254040922|gb|ACT57717.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814]
          Length = 269

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 80/306 (26%), Gaps = 69/306 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +RL SWNIN                        +  +      DI+ LQE+    A   
Sbjct: 3   DLRLTSWNIN----------------SVRLRMPRVADFIAREKPDILCLQEIKCREAEYP 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +          + E         +       +A+  +           L   D   R   
Sbjct: 47  L---------KAFEEAGLPYVEIAGQKGMHGVAIGSRYPLER------LETPDFCIREEA 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    + V + G ++     +L      D  + T +   +   +    ++   + +    
Sbjct: 92  R---AISVRVAGVEVH----NLYVPAGGDEPDPTINDKFAHKLEFLARMEKTYSARSNDS 144

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            P ++ GD N                   +         + +           + + +  
Sbjct: 145 QPLIVVGDINVAPREHDVWSHKQLLKVVSHTPIETQAVDRILKEGGFADIARVKHEDKEK 204

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+   ++ A       S     Y        G++ SDH 
Sbjct: 205 LYSWWSYRAKDWEKSNRGRRLDHIWANRAATPLTDPAS-----YEIHKDDRGGEKPSDHA 259

Query: 297 PISIDY 302
           P++I+ 
Sbjct: 260 PVTINL 265


>gi|282877907|ref|ZP_06286716.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281299908|gb|EFA92268.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 283

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 88/281 (31%), Gaps = 42/281 (14%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               + ++S+NI   S   G  +       + ++   + +  K+ +AD+V LQE+ S   
Sbjct: 38  SKNNLTVMSYNIRHCSPYIGSGVP------SPAEVGNVAKVLKDKNADVVLLQEVDSMTT 91

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            A    +       +  +     K+          A+  K       ++PL    D  + 
Sbjct: 92  RAFNIDQAKELAKRAGYKYHKFFKQKDYQGGAYGAAILSKYEMKNIINHPLPKMIDGQTI 151

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            G+       +   GK I++  +HL                    S++ +    ++   +
Sbjct: 152 KGSNILGSAKIVFAGKDIYIATMHL----------------SVTESERLKQFPKYLECLE 195

Query: 200 E-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    +I GDFN +             ++ N         KD       + +    +D
Sbjct: 196 PYAHKLIIIGGDFNSRPTDASI-----TMLEANG---FTRTNKDPNKFTIPSDKPNRELD 247

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           Y     +    ++  +              G   SDH PI 
Sbjct: 248 YIAYKPSTAVDVVSHTV-----------FTGINASDHLPIV 277


>gi|313206031|ref|YP_004045208.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
 gi|312445347|gb|ADQ81702.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
          Length = 308

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/302 (9%), Positives = 85/302 (28%), Gaps = 30/302 (9%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD------ADIVFLQEMGSYNA 79
           +  +N+          L      +  +         + ++        +V L E+G+   
Sbjct: 8   VAFYNVENFFPPHTPYLPHWDNYKYHNKLHKTAHIFELINQYHNTLPILVGLAEIGNKTV 67

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +  +  K  +   Y      +  +R  +  + +    +  K+   ++  + +   +    
Sbjct: 68  LEDLLAKPVFGGNYHYLHYESPDERGIDVALLYDKNKITVKHSEPIRFKFEMKNEQGELY 127

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  +  ++E NG+      +HL S    D      +     ++   + +       
Sbjct: 128 EDTTRDVLHSVLEYNGETFHCFVMHLPSKREQDINLPKRNEILENINALIENI------I 181

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            +     ++ GDFN   N        +           F         +  + +  +  D
Sbjct: 182 IKDKEAVLVLGDFNENPNEDNLIQFTYHEGILELLHNPFSALYYLGDYSTYHKKEGLLFD 241

Query: 259 YFVMDQNAYKFL-----------------IQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +  ++ ++                     +      +            SDH P+ ++
Sbjct: 242 QIMFSRDFFQTSFGLTYKKAEVFNPTEIKNWDKMKNRPFRTYSGTRYLGGYSDHFPVLVE 301

Query: 302 YD 303
           ++
Sbjct: 302 FE 303


>gi|308175792|ref|YP_003922497.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens DSM
           7]
 gi|307608656|emb|CBI45027.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens DSM
           7]
 gi|328555768|gb|AEB26260.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens
           TA208]
 gi|328914157|gb|AEB65753.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens LL3]
          Length = 252

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L              R       +    +   ADI+ LQE    +    +
Sbjct: 1   MKLISWNVNGL--------------RAVMKKIDINTCLQETKADILCLQETKVQDGQVSL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+     +             +    ++  AV  K   +       +   D   R    
Sbjct: 47  QPEGYHDYW-----------NYAVKKGYSGTAVFSKVKPLQVSYGLGIDDHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  + ++V++ +  +        +      +      Q L            
Sbjct: 92  -----VITLEFENVFVVNCYTPNAKRGLERIDYRLQWEADFKDYLQKLDQ--------KK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + +  +        F      +  A 
Sbjct: 139 PVILCGDLNVAHREIDLKNPKANRKNAGFSDQEREAFSVLLNAGFTDSFRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DY ++     + + Q +                  SDHCP+ 
Sbjct: 199 SWWSYRTNAREKNIGWRLDYVIVSDRLKQRITQAAIC-----------ADIMGSDHCPVE 247

Query: 300 IDYD 303
           +  D
Sbjct: 248 MTLD 251


>gi|262408023|ref|ZP_06084571.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|262354831|gb|EEZ03923.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
          Length = 292

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 80/288 (27%), Gaps = 47/288 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL S+NI T  ++          K        L    +    D+  +QE  +   +  +
Sbjct: 38  IRLASYNIRTKGDKGD--------KSWEVRLNALVDVVRRNKFDMFAIQEGRTSQ-LKDM 88

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKD----SFS 138
              N +             +   N   H AI  +K   +VL+   +      D     + 
Sbjct: 89  MILNEYSYI-------GRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWG 141

Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R       +    GKK +V + H                S  +L +Q + +     
Sbjct: 142 ARCRRICTWGYFKDLRTGKKFYVFNSHT-----DHEATEARRQSSFMLLEQVRKIAK--- 193

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
                  P    GDFN   +          ++  +         K    +     +    
Sbjct: 194 -----GRPTFCTGDFNATPDEEPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAYDKTGKT 248

Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ID+  +                 +  DD     K  SDH P+ ++
Sbjct: 249 AKRIDFIFVTPKIKILS--------YHTIDDDIKYNKYSSDHFPVMVE 288


>gi|53722408|ref|YP_111393.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|52212822|emb|CAH38854.1| putative Endonuclease/Exonuclease/phosphatase family protein
           [Burkholderia pseudomallei K96243]
          Length = 338

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 56/285 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               +++R+ ++NI+                 T S    +      L AD++ LQE+   
Sbjct: 47  QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPLG 95

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A           +   T                   AV  +      +   L     SF
Sbjct: 96  GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A++  +E     + V+  HL               S +  S Q   L   +  
Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                +P ++ GD N         + F +       +  F +    R            +
Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +     ++L+  +            +R +R SDH P+    
Sbjct: 241 DRIWVHPG--EWLVDVAPH--------RSARARRASDHYPLVARI 275


>gi|319782509|ref|YP_004141985.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168397|gb|ADV11935.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 256

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NIN ++                     L  +      D+V LQE+ + +     
Sbjct: 1   MKIASFNINNINS----------------RLENLLTWLAVAKPDVVCLQELKARD----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S      +            +A+  +       + P+L          +R
Sbjct: 40  -----MQFPRSALAAAGYGAVWKGEPTWNGVAILAR------SAEPVLTRDALPGDEADR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           ++  +   +NG  I V  ++  +       +  Y  +          L+    Q  ++ +
Sbjct: 89  QSRYIEAAVNG--IVVACLYAPNGNPQPGPKFAYKLAWHAR------LEAHAEQLLDTGL 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                           ++ +     L    K+        
Sbjct: 141 PVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRASFRRLLDQGWLDALRKKHPKETLYT 200

Query: 249 KNLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+ ++ +   + L            D         SDH P+ +
Sbjct: 201 FWDYRRNRWPRDAGLRLDHILLSKKLARRLTAAGI-------DRDVRGEDGASDHAPVWV 253

Query: 301 DY 302
           + 
Sbjct: 254 EL 255


>gi|85860240|ref|YP_462442.1| endonuclease/exonuclease/phosphatase family protein [Syntrophus
           aciditrophicus SB]
 gi|85723331|gb|ABC78274.1| endonuclease/exonuclease/phosphatase family protein [Syntrophus
           aciditrophicus SB]
          Length = 335

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 47/304 (15%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +  +  K+ ++S+NI   + Q+G + W            L+R+       D++ LQE   
Sbjct: 42  SPDIGLKLNVMSFNIRRGTRQDGRNHWI-------YRRNLVREILNQYRPDVLGLQEALD 94

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +           +          +    ++     T   +            P + A   
Sbjct: 95  FQMSEVCSMLPGYEKVGIGNLGGSRGLHNAIFYDATRFLI-SDEGTFWLSDAPDIPASKG 153

Query: 137 FSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +     R      +  + + +  +  + HL               S     +    L   
Sbjct: 154 WGNIIPRICTWARLVEKKSQQAFYFYNTHLDH------------ISLRARKKSVILLTRH 201

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPK 239
           I ++     P V+ GDFN +           +                +     +     
Sbjct: 202 IHER-PFTEPLVLTGDFNSRERSAAIQYLKGEVPLKIKIKAKVLNPVPLMDTFRVKYPDN 260

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              +  +  ++   +  IDY  +           S   I       +      SDH P+ 
Sbjct: 261 RNIATFHGYRSYFFRFKIDYIFVSG---------SARVIDAEIIQRRWGKCYPSDHFPLL 311

Query: 300 IDYD 303
              D
Sbjct: 312 AHVD 315


>gi|328470608|gb|EGF41519.1| hypothetical protein VP10329_07407 [Vibrio parahaemolyticus 10329]
          Length = 317

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 100/314 (31%), Gaps = 30/314 (9%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           S   ++  V+ N+                 S ++        +   + L+ DI+ LQE+ 
Sbjct: 2   SQPSRITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGLQEVF 61

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLG 132
           S       F    +  +++T            +    AIA R     V +  +    L  
Sbjct: 62  SVEETRAYFLSFGFP-YFATVDTPKIEDEYIYSRPVVAIASRFPIEDVKRVEFDSNSLTP 120

Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLD-------SLENTYSPSCSLL 184
              + +   +R+ +   +V      I +   HLKS    D       S       S    
Sbjct: 121 FGVNEAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTDTPEPSSRAMARWLSTQQR 180

Query: 185 SQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             +A  L+D +  Q +   +P V+ GD N+ I+    N+   +T   + + ++       
Sbjct: 181 GWEAAMLRDAMQAQYRAHPIPTVLMGDMNQPISKESVNNVLTETFSDSVTELQLKDGWHL 240

Query: 244 RCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289
           +           + +      +DY ++ Q             I Y   +           
Sbjct: 241 QTGSSLEVRPATHYHFSTGNVLDYILLSQEFDTHSDVSVAEVIDYQVLEQHLINPSYEND 300

Query: 290 KRLSDHCPISIDYD 303
           K  SDH  +S+  +
Sbjct: 301 KNASDHAFVSLTVE 314


>gi|332305999|ref|YP_004433850.1| exodeoxyribonuclease III [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173328|gb|AEE22582.1| exodeoxyribonuclease III [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 269

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 77/309 (24%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN                   +    L+        DI+ LQE+  +N +   
Sbjct: 1   MKIISFNING----------------IRARLHQLKALIDKHQPDIIGLQEIKVHNDM--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K      Q     G       A  R
Sbjct: 42  -------FPVADVEAMGYKVYFHGQKAHYGVAMLCKEEPSDVQ----YGFPTDDEDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      NG+ + VL+       F      ++        +  + L  ++        
Sbjct: 91  MIMVSYPMPNGETVRVLN-----GYFPQGENRSHETKFPAKRKYYEDLSTYLNTHHTPDE 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                          L     +   +        F     
Sbjct: 146 NVVVMGDVNISHTDLDIGIGEPNRKRWLQTGKCSFLPEERLWLNDLIDWGFSDGFRTLNP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +  +  ++ L            D      ++ S
Sbjct: 206 ETNEHFSWFDYRSKGFLDNRGLRIDLILATKKLHESLSDAGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI  +Y
Sbjct: 259 DHAPIWAEY 267


>gi|46143793|ref|ZP_00134262.2| COG0708: Exonuclease III [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|165976406|ref|YP_001651999.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|307245885|ref|ZP_07527970.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307247975|ref|ZP_07530006.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307250227|ref|ZP_07532183.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307252613|ref|ZP_07534507.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307254858|ref|ZP_07536684.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307257023|ref|ZP_07538799.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307259300|ref|ZP_07541029.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307261462|ref|ZP_07543133.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307263645|ref|ZP_07545256.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|165876507|gb|ABY69555.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|306853245|gb|EFM85465.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306855529|gb|EFM87701.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306857756|gb|EFM89856.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306859935|gb|EFM91954.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306862229|gb|EFM94197.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306864507|gb|EFM96414.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306866667|gb|EFM98526.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868857|gb|EFN00663.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306871022|gb|EFN02755.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 280

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 85/323 (26%), Gaps = 77/323 (23%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F +   +    +++ +S+NIN L                 +    L    +    D++ L
Sbjct: 2   FALSVVSIWILRMKFISFNINGL----------------RARPHQLEAIIEKHQPDVLGL 45

Query: 72  QE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           QE  +   +    +     + +F+                 H  +A+  K   +  +   
Sbjct: 46  QEIKVADEDFPWDLVNHLGYHVFHH------------GQKGHYGVALLTKKEPLAVRKGF 93

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                D+  R      +   +E     + VL+       F      ++        +   
Sbjct: 94  PTDNADAQKR-----MIMADIETEFGVLTVLN-----GYFPQGENRSHETKFPAKEKFYA 143

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINY---------------------LGNNDDFWKTI 228
            L+ ++  +     P VI GD N                          L    ++   +
Sbjct: 144 DLQHYLESELSPENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFLPEEREWLDRL 203

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEIL 279
                +  F        +       +           ID  +  +   +  ++       
Sbjct: 204 YSYGLIDTFRAMNPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAERCVETGI---- 259

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
              D      ++ SDH P+   +
Sbjct: 260 ---DLEIRAMEKPSDHSPVWAVF 279


>gi|303237736|ref|ZP_07324296.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           disiens FB035-09AN]
 gi|302482188|gb|EFL45223.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           disiens FB035-09AN]
          Length = 348

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 102/352 (28%), Gaps = 64/352 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKN-----------S 46
           ++KY+  L F ++   AS AQK      +  +N   L +        +           +
Sbjct: 1   MKKYLFFLTFAMLFSVASNAQKKFSVYAVGFYNQENLFDYTHDEGKNDYDFTPDGSYKWN 60

Query: 47  VKRTTSDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             +  S    + +    +  D        I+ L E+ + + +  +  +       +    
Sbjct: 61  KMKYESKLRNMSKVLSEMGTDVLPNVGCAIIGLSEVENAHVLDDLTAQP---ALAARNYK 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +      I  A+    K  ++      P +    + S    R  + +   +  + +
Sbjct: 118 YVHIEGPDRRGIDCALLYNPKMFKIRNTKLVPYVYELPNDSNRATRGFLTVSGTLANEHV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V+  H  S                    Q + LKD +  +++  V  ++ GD N     
Sbjct: 178 TVVVCHWPSRGAGSYYRELGGK-------QVKALKDSL-LREDPNVKVLVMGDMNDDPTN 229

Query: 218 LGNND------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
              ++      +  +  + +     +           +        D  VM  N      
Sbjct: 230 KSMHECLSAKANIDEVGEGDMYNPFYNILVKEGTGTLQYQGKWNLFDQIVMTPNMLNKNN 289

Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
           Q+ FS + +  + I  R                           SDH P+ +
Sbjct: 290 QKDFSTLKFWRNQIFRRDYLFQETGKYKGNTKRTTAGGVWLDGYSDHLPVVV 341


>gi|253565030|ref|ZP_04842486.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 3_2_5]
 gi|251946495|gb|EES86872.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 3_2_5]
          Length = 344

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 84/326 (25%), Gaps = 56/326 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+V WN     +    SL  +           + +R       + +    +       
Sbjct: 24  PFRVVFWNTENFFDTRHDSLKNDMEFLPHSMRHWNHRRYKKKLDNVARTLTAIGEWNFPA 83

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ L E+ +   +  +     +            +       I+ A+  ++   ++L   
Sbjct: 84  LIGLCEVENDTVMRDL---TLYSPLKEAGYRYVMTHCSDLRGINVALLYQRDRFKLLS-- 138

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           Y  L   +       R  + +  + + G  + ++  HL S             S      
Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGV------RQSEPYRLY 192

Query: 187 QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT------IDPNDSLIRFP 238
            AQ LKD              +I GDFN                            +   
Sbjct: 193 AAQKLKDAADSLINVRPSAKLIIMGDFNDYPTDKSVVQVLQALSPEVSTHHDRLYHLLAR 252

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-------------------- 278
           K KD    + K       +D+ ++              E                     
Sbjct: 253 KAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTEEKKANVARLPFLLTKDEKYGGM 312

Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303
             +         +  SDH P+ +D++
Sbjct: 313 QPFRTYVGMKYQEGYSDHLPVYVDFE 338


>gi|255532421|ref|YP_003092793.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255345405|gb|ACU04731.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 576

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 78/286 (27%), Gaps = 56/286 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+ ++++ L+++NI                         +       + D+V LQE+  Y
Sbjct: 345 AAQSEEITLMTYNIQLAGSG----------------LQTIANVITAQNPDLVCLQEVDKY 388

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              +         +   T      SK    +      A+  K        Y L       
Sbjct: 389 TNRSGTSINQAEELGKLTGMYYYFSKAMDFDGGEYGDAILSKWPLYEITRYVLPAGTG-- 446

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R+   +  E NG        HL               +      QA  + + +T 
Sbjct: 447 ---EPRQMAVIRTEKNGAMFNFAGTHLDHLGP----------AAGNSLLQATAINNIVTG 493

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 PF++ GDFN   + +       K      S        ++   +         I
Sbjct: 494 IS---YPFILGGDFNEIPSSVTIAKLKEKFTLGCISSCPATHPSNAATRS---------I 541

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           DYF+             F+ + Y   +        SDH P+     
Sbjct: 542 DYFMSRPG--------GFNVLSYGTINTL-----ASDHLPVVATVT 574


>gi|229104299|ref|ZP_04234968.1| Exodeoxyribonuclease [Bacillus cereus Rock3-28]
 gi|229117223|ref|ZP_04246601.1| Exodeoxyribonuclease [Bacillus cereus Rock1-3]
 gi|228666123|gb|EEL21587.1| Exodeoxyribonuclease [Bacillus cereus Rock1-3]
 gi|228678997|gb|EEL33205.1| Exodeoxyribonuclease [Bacillus cereus Rock3-28]
          Length = 252

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFEDFYMITLYTPNSKRGLERLDYRMEWEDDFRTYIKQL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                   +     + +  I     +  +     ++  A 
Sbjct: 139 PVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTRILEEGFVDTYRHLYPNQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     +            D   +     SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERIKGQI-----------TDAKINSEIMGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|299770919|ref|YP_003732945.1| putative extracellular nuclease [Acinetobacter sp. DR1]
 gi|298701007|gb|ADI91572.1| putative extracellular nuclease [Acinetobacter sp. DR1]
          Length = 812

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 91/331 (27%), Gaps = 50/331 (15%)

Query: 15  PCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFL 71
                 A  +R+ S+N+ N  +   G    + +  +   D     +    K +DAD+  L
Sbjct: 455 SVLTKNANHIRVASFNVLNYDNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGL 514

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYP 129
            E+ +          N      S  + +      R   + I  AI    K V+ L +   
Sbjct: 515 MEIANNGYGPNSAIANLTKALGSDWKYVVPENLDRLGGDAIAVAIIYNSKRVKPLNKPVV 574

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS------- 182
           L    D   +     A         K   V+  HLKS        N+             
Sbjct: 575 L----DLGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDANSTDADQKDGQGCWN 630

Query: 183 -LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
               +    +  W+ +          ++ GD N         +        N  ++    
Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVQKQNALLVGDMN----SYAKEEPILSFEKANYKVLLNDT 686

Query: 240 EKDSRCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +      A                   +D+ + D   Y  +++     I  +E  +    
Sbjct: 687 KVGQGTQAYSYVYGVASDANGNGGAGNLDHAIADAALYPKVVRTFAWHINADEPTVLDYN 746

Query: 290 -----------------KRLSDHCPISIDYD 303
                             R SDH P+ +D D
Sbjct: 747 EEYKTDEQKALFFGEDAYRSSDHDPVIVDLD 777


>gi|87201202|ref|YP_498459.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136883|gb|ABD27625.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM
           12444]
          Length = 263

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 80/306 (26%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                        + ++      D++ LQE+    +V   
Sbjct: 2   ISVATWNIN----------------SVRLRADQVERFLLQEAPDVLCLQEIKCAESV--- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    +     + ++ R       +  +A   +        +      ++      
Sbjct: 43  -------FPHEVFEKLGYTHRAIHGQKGYHGVATVSRIPFRDFSRHDWQDNGEARH---- 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + + +   G  + + ++++ +       +           Q+  +L+      ++  
Sbjct: 92  ---IGVELLGPGNGLILENVYIPAG-----GDVADREVNPKFGQKLDFLERMTRWAEKIE 143

Query: 203 VPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCN 246
            P +I GDFN         D                   +  D +  +    K   +   
Sbjct: 144 RPTLIVGDFNIAPLECDVYDHKALLKVVSHTPLEVETLQRFADAHGWVDLGRKHIPAPER 203

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           +D+      A        F E          +  + SDH P
Sbjct: 204 NYSWWSYRSYWRAKDQGRRLDHMWASPEAAAQTRGHRFVEET-------RKWDQPSDHIP 256

Query: 298 ISIDYD 303
           +  + D
Sbjct: 257 LITELD 262


>gi|33239934|ref|NP_874876.1| exonuclease III [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|33237460|gb|AAP99528.1| Exonuclease III [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 276

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 69/305 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
             +WN+N                   +  + + ++      D++ LQE        K+FP
Sbjct: 3   FATWNVN----------------SIRTRLSQVEEFLDETQPDLLCLQE---TKVEDKLFP 43

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RVLQQSYPLLGAKDSFSRAGN 142
           +        +     +         +  +A+          L  S  L+  + S      
Sbjct: 44  RE-------SIEKRGYQVSFYGQKAYNGVALISNQKLDDIRLGISGELVNNQVSTFLDEQ 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +R +  L+      I V+++++ +   LDS +  Y        +    LK +   ++E  
Sbjct: 97  KRIISALIN----GIRVVNVYVPNGSSLDSEKYIYK------LKWLDHLKKYFESQEERS 146

Query: 203 VPFVIAGDFNRKINYLGNNDD------FWKTIDP--------NDSLIRFPKEKDSRCNAN 248
            P  + GDFN  +     ++          ++             L    +  ++     
Sbjct: 147 EPLCLMGDFNIVLEEKDIHNPKRFNNGIMASLSEREALQNVLGTRLEDVFRLFEADTGHW 206

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+  + +                          + SDH P+ 
Sbjct: 207 SWWDYRSGAWQKDQGWRIDHIYLSEELINNARSCVIH-------KKARGNIQPSDHAPVL 259

Query: 300 IDYDF 304
           +D ++
Sbjct: 260 VDINW 264


>gi|308274774|emb|CBX31373.1| hypothetical protein N47_E48850 [uncultured Desulfobacterium sp.]
          Length = 335

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/304 (10%), Positives = 82/304 (26%), Gaps = 47/304 (15%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +++  ++++S+NI   + ++G + W           +L+ +       D++ LQE  
Sbjct: 41  SVPNISLNLKIMSFNIRRGTARDGKNHW-------KYRRSLVHEILDLYCPDVLGLQEAL 93

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +           +      +      +  +            +         P +    
Sbjct: 94  DFQIPEISAMLPGYKNVGIGDL-GGSKRLHNTIFYDANRFELSEEGTFWLSDTPDIPRSK 152

Query: 136 SFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            +     R    + +  + +G+  +  + HL                     +   +L  
Sbjct: 153 GWGNIMPRICTWVRLIEKNSGQAFYFYNTHLDHLSQGS------------RKKSVIFLIK 200

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFP 238
            I  +     PF++ GDFN +           K+               +     +    
Sbjct: 201 RIHARSYPD-PFILTGDFNARERSAPIQYLKGKSPLRIKTKLTVINPTPLVDTFRVRHPK 259

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +  +    +  +DY  +           S   +      ++ +    SDH P+
Sbjct: 260 NRNSVTFHGFRKYFFRFRLDYIFV---------PSSVRVLDAKIIQLRWKKCYPSDHFPL 310

Query: 299 SIDY 302
               
Sbjct: 311 FTHI 314


>gi|298376208|ref|ZP_06986164.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298267245|gb|EFI08902.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 246

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 88/308 (28%), Gaps = 67/308 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +++ +  L   L+   + + +    +R++S+NI                    ++   + 
Sbjct: 1   MKRILFLLTIALLNLGSGLCKTRQSLRIMSYNIR-----------IGIGMDQQTNLKRIA 49

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +    +  D V LQE+                   S         + +     T +    
Sbjct: 50  EVINKIQPDYVGLQEVD------------------SVCERSGWINQYAELARLTGM---Y 88

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                  +    L    + SR   R    + +    +    L +   ++   ++  +   
Sbjct: 89  PIFAPATERSKGLYGIAALSRKKPRSYQYIPLPGKEEPRTFLCLEYPNYTLCNTHFSLDP 148

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIR 236
            S      +   ++      K    P +I GDFN + +          W+ +        
Sbjct: 149 DS------RLASIRLINETMKSENKPILITGDFNMEPDSKEFKTMKQTWRLLSD------ 196

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                        +   ++ +DY   D      +I +   +I            + SDH 
Sbjct: 197 ------PTLETYPSDHPRLRLDYIFGDLRHEFRIINDQVIDI------------QSSDHL 238

Query: 297 PISIDYDF 304
           PI ID  F
Sbjct: 239 PIYIDVLF 246


>gi|206562702|ref|YP_002233465.1| putative endonuclease/exonuclease/phosphatase family protein
           [Burkholderia cenocepacia J2315]
 gi|198038742|emb|CAR54703.1| putative endonuclease/exonuclease/phosphatase family protein
           [Burkholderia cenocepacia J2315]
          Length = 618

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 81/315 (25%), Gaps = 47/315 (14%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEM 74
            VR+VS+N+ N  +       +     R              +    + L AD++ L E+
Sbjct: 296 DVRVVSFNVFNYFNGDGHGGGFDAPGNRGAKTPAAFARQEAKIVAALRALRADVIGLMEI 355

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            +         +          R ++    R   + I  A+    + V       P+  A
Sbjct: 356 ANNGHGDASAIRRLAAQLGDGWRTVDPGTARLGRDAIAVALLYDSRTVE------PVGRA 409

Query: 134 KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----- 186
                   +R  +       G      V   HLKS     +       S           
Sbjct: 410 ATVALGGRHRPPLAQTFRRIGGTHAFTVAVNHLKSKNCPHASGANLDQSDGQGCWNAART 469

Query: 187 -QAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             A  + DW+      +     ++ GD N             + ++         +    
Sbjct: 470 RAAARVADWLATSPTGVAAGGVLLIGDLNSYAKEDPV-----RALEARGYANLVARFVGD 524

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----------------DIK 286
              +         +D+ +        +    F  I  +E                     
Sbjct: 525 AAYSYVFRGEAGNLDHALATPPLAARVKAVRFWHINADEPLVLQPVPDYKTSARRSTYYA 584

Query: 287 SRGKRLSDHCPISID 301
               R SDH P+ ID
Sbjct: 585 PDAYRSSDHDPVVID 599


>gi|91216737|ref|ZP_01253702.1| hypothetical protein P700755_08744 [Psychroflexus torquis ATCC
           700755]
 gi|91185206|gb|EAS71584.1| hypothetical protein P700755_08744 [Psychroflexus torquis ATCC
           700755]
          Length = 370

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/356 (11%), Positives = 97/356 (27%), Gaps = 65/356 (18%)

Query: 3   RKYVLALVFFLVPCTASV--------AQKV---RLVSWNINTLSEQEGVSLWKN------ 45
           R   L  +  L  C++          +++     +  +N+  L + E      +      
Sbjct: 8   RGLFLGFIVLLSSCSSVQKTTPTSQESEEFLINTIGFYNLENLFDTEDDPTKFDESSPLM 67

Query: 46  ------SVKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIF 92
                       +    + +   +L          ++ + E+ ++N +  +   ++   +
Sbjct: 68  EIAEGERETIYRAKVANMAKVIADLGSEVTGKPPAVIGVCEVENFNVLQDLVNDHSLSGY 127

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSFSRAGNRRAVELL 149
                  N         I  A+  RK   R +        L    D   R   R  + + 
Sbjct: 128 DYGIIHYNSP---DARSIDVALLYRKSIFRPIHSKAHELVLYSDIDRTKRKYTRDQLYVK 184

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            +++G+++  +  H  S    +        + + L+   + +KD I  + +     +I G
Sbjct: 185 GKLDGEEMHFIVNHWPSRRGGEKRSRPNRVNAAKLT---KKIKDSIQTQ-DPYAKILIMG 240

Query: 210 DFNRKINYLGNND-----DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           DFN         +     +F + +          K                  D  ++ +
Sbjct: 241 DFNDGPYNESIKEVLEAQEFSENLGIRGLYNPLEKLFKKGIGTIAWRDTWDLFDMILVSR 300

Query: 265 NAYKFLIQES--------------------FSEILYNEDDIKSRGKRLSDHCPISI 300
                    S                    F    +            SDH P+ +
Sbjct: 301 PLIHTTDYSSYTLYQANIFNPYYLQNPKGRFKGYPFRSFADGGFTNGYSDHFPVYL 356


>gi|270293603|ref|ZP_06199805.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275070|gb|EFA20930.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 352

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 92/350 (26%), Gaps = 65/350 (18%)

Query: 8   ALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSV-----------KRT 50
            ++F L P  +   Q        R+VS+N+  L +    +L  +              + 
Sbjct: 9   VILFLLCPYISLYGQEGRDTLTFRIVSYNVENLFDFRHDTLKNDYEFLPDATRHWNYSKY 68

Query: 51  TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 + +            +V L E+ + + +  +     +      +     ++   
Sbjct: 69  RKKLDNIARVIIATGGWTPPALVALCEVENDSVMRDL---TRYSALREADYRYVMTQSPD 125

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLK 165
              I  A+  ++   ++L     L   K   +    R  + +  + +N   + VL  H  
Sbjct: 126 ERGIDVALLYQRNLFKLLSYQ-SLPVDKPRKNSRPTRDILHVSGLLLNRDTLDVLVAHFP 184

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDD 223
           S             S       A+ +K  I            V+ GDFN         + 
Sbjct: 185 SRSGG------ARESEPYRLLAARKVKHAIDSLYTIRRHPQIVLLGDFNDYPENKSVKEV 238

Query: 224 F--------WKTIDPNDSLIRFPKE--KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                      ++ P         +        + K       +D+ ++     +     
Sbjct: 239 LEAAAPSTLQDSLRPQKLYHLLAGKAKTRKHFGSYKYQGEWGLLDHIIVSGTLLQEHAPL 298

Query: 274 SFSEI---------------------LYNEDDIKSRGKRLSDHCPISIDY 302
              E                       ++           SDH P+  ++
Sbjct: 299 YTEEAKADVFCLPFLLTRDKKYGGQQPFHTYYGMKYQGGYSDHLPVYAEF 348


>gi|237716422|ref|ZP_04546903.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229444069|gb|EEO49860.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 279

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 80/288 (27%), Gaps = 47/288 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL S+NI T  ++          K        L    +    D+  +QE  +   +  +
Sbjct: 25  IRLASYNIRTKGDKGD--------KSWEVRLNALVDVVRRNKFDMFAIQEGRTSQ-LKDM 75

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKD----SFS 138
              N +             +   N   H AI  +K   +VL+   +      D     + 
Sbjct: 76  MILNEYSYI-------GRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWG 128

Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R       +    GKK +V + H                S  +L +Q + +     
Sbjct: 129 ARCRRICTWGYFKDLRTGKKFYVFNSHT-----DHEATEARRQSSFMLLEQVRKIAK--- 180

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
                  P    GDFN   +          ++  +         K    +     +    
Sbjct: 181 -----GRPTFCTGDFNATPDEEPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAYDKTGKT 235

Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ID+  +                 +  DD     K  SDH P+ ++
Sbjct: 236 AKRIDFIFVTPKIKILS--------YHTIDDDIKYNKYSSDHFPVMVE 275


>gi|296138207|ref|YP_003645450.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
 gi|296026341|gb|ADG77111.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
          Length = 289

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 76/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                     +  L ++  +   D+V LQE+       K+
Sbjct: 1   MRVATWNVN----------------SVKQRHGRLLEWLDSRQPDVVCLQEL-------KL 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +         +    +        AV  +   +      + GA         R
Sbjct: 38  TDDAFATLIGPDLTERGYEFATAGQPQWNGSAVLSRVG-LDDVVVGIPGAPAFDGTVEGR 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +        I V  ++  +   + S    Y           +WL     Q     V
Sbjct: 97  AISAVC-----AGIRVHSLYTPNGREVGSDHYAYK---------LEWLAALRDQVSADSV 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         D  + ++         +E        
Sbjct: 143 PQLVCGDMNIAPTDEDVFDPAAFAGHTHVTEPERDALRALEDLGLRDVV-REHWPTDQVF 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +                     D    +GK  SDH P+ 
Sbjct: 202 SYWDYRAGMFNKNLGMRIDLILASGPVADRTAAAWI-------DRQARKGKGPSDHAPVM 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 LDLD 258


>gi|84684871|ref|ZP_01012771.1| exodeoxyribonuclease III [Maritimibacter alkaliphilus HTCC2654]
 gi|84667206|gb|EAQ13676.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2654]
          Length = 267

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 66/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NIN                   +    +  +      D+V  QE+ S       
Sbjct: 1   MKIASYNING----------------IKARLPAVTDWLTEAQPDVVIFQEIKS------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLGAKDSFSRA 140
             +N     +       ++           +A+  K                 +D     
Sbjct: 38  VDENFPREHFEDM---GYNVETHGQKSFNGVAILSKRPLEDVTRGLPGAEGTGRDGEDDE 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  +E  V  +   + +  ++L +   +   +  Y        +  + L+    +   
Sbjct: 95  QARY-IEATVLGDRNAVRICGLYLPNGNPVGDEKFAYK------LRWMERLEKRAKELLA 147

Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
              PF++AGD+N                       +   FW+  +   +     + + + 
Sbjct: 148 LEQPFLMAGDYNVIPQGIDALHPENWRDDALFQPESRGAFWRLQNLGLTEAFRARNQAAE 207

Query: 245 CNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                + +           ID+F++       L            D       + SDH P
Sbjct: 208 QFTFWDFQRGAWQRNDGIRIDHFLLSPQCADLLEDCQI-------DKEVRGRDKPSDHVP 260

Query: 298 ISIDY 302
           I ++ 
Sbjct: 261 IWVEL 265


>gi|83858693|ref|ZP_00952215.1| hypothetical protein OA2633_04301 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853516|gb|EAP91368.1| hypothetical protein OA2633_04301 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 263

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 80/298 (26%), Gaps = 66/298 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + SWN+N                   +    +  + K    D+  LQE+ +   V +
Sbjct: 2   TLSVASWNVN----------------SIKARLPNVLDWLKEASPDVACLQEIKT---VDE 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP+            + ++        +  +A+  K          L G  +       
Sbjct: 43  GFPRLE-------IEELGYNVETVGQKTYNGVALLSKRPIEEISQRALPGDDEDDQARY- 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +E ++  +   + V  I+L +       +  Y  +        + LK          
Sbjct: 95  ---IEAVISADSGPVRVASIYLPNGNPAPGPKYDYKLA------WMKRLKAHARSLLAFE 145

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNAN 248
            P ++AGD+N        +D      D                        + D R +  
Sbjct: 146 EPVILAGDYNLIPRDSDVHDAAAWEGDALIRPESRDAFAKILWLGYSEAFMQADGRAHQY 205

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                +           ID+ ++   A   L                   ++ SDH P
Sbjct: 206 TFWDYQAGAWQKNNGIRIDHLLLSPQAADRLKAVEI-------AKDVRGKEKASDHVP 256


>gi|78066923|ref|YP_369692.1| exodeoxyribonuclease III [Burkholderia sp. 383]
 gi|77967668|gb|ABB09048.1| Exodeoxyribonuclease III [Burkholderia sp. 383]
          Length = 258

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 78/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +    L      +           +
Sbjct: 35  LKLPDEKFPRAELEAAGYRSWFTGQKTYNGVAILAR--DTLSVDESDVVRNIPGFDDPQQ 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R V   V+     + ++  +  +    DS +  Y        Q    L+ W+  + +   
Sbjct: 93  RVVAATVD----GVRIVSAYFPNGQAPDSDKFVYK------MQWLDALQAWLRTELQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++     +              D      ++ SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHVLLSPALAETCTSCEV-------DRTPRTWEQPSDHTPVVA 255


>gi|127514121|ref|YP_001095318.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4]
 gi|126639416|gb|ABO25059.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4]
          Length = 871

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/377 (11%), Positives = 97/377 (25%), Gaps = 87/377 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS-------DYTLLRQYAKNLDAD 67
               +    +R+ S+N+              +  R  +         T +      ++AD
Sbjct: 458 APAIATKGDIRVASFNVLNFFNNAVGGDDTPADNRGANTEEEMLLQRTKIVNAITAMNAD 517

Query: 68  IVFLQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAI 114
           IV L E+G+             +A+           F        +  +   +D I   +
Sbjct: 518 IVGLMEIGNNGFGEKSAIQNLLDALNAELSDADAYSFVEINDADKYQGKFVGSDAITVGM 577

Query: 115 AVRKKNVRVLQQSYPLLGAKD------------------SFSRAGNRRAVELLVEINGKK 156
             R   V     ++ +   +                          R ++    +I+ ++
Sbjct: 578 LYRAAKVTPSGDAFLIATPEQHATAGVVTRGEGDKAELSPAFDKYQRHSLGQTFKIHDEQ 637

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSC-----------SLLSQQAQWLKDWITQKKE----- 200
           + V+  HLKS       +                        A+ + D +   K      
Sbjct: 638 LTVVVNHLKSKGSGCVEDWANYEDNSDPADLQGKCNEFRVSAAKVIGDALQDVKGDLLVI 697

Query: 201 -------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPKE 240
                     P  +  DF+   +        W T+D                 +    K 
Sbjct: 698 GDMNAYGKEDPIRVLTDFDAANSDRDIMTASWTTLDGKVYEREGSKIEKGYGLINLNTKV 757

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------- 291
                 +         +D+ + + +  + ++      I   E ++   G +         
Sbjct: 758 HGPDTYSYSYNGELGNLDHALANTSLAERVLDIQDWHINAVESNLFEYGSKYTGELAKSE 817

Query: 292 ----LSDHCPISIDYDF 304
                SDH P+ +   +
Sbjct: 818 NAFSASDHDPVIVALSY 834


>gi|206560581|ref|YP_002231346.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
 gi|198036623|emb|CAR52521.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
          Length = 258

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 80/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  ++  V+ +S  +      F     R
Sbjct: 35  LKLPDEKFPRADLEAAGYRSWFTGQKTYNGVAILARDTLVVDESDVVRNIP-GFDDPQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + ++  +  +   LDS +  Y        Q    L+ W+  + +   
Sbjct: 94  VIAATV-----DGVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLRTELQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D      ++ SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSPELAATCASCEV-------DRTPRTWEQPSDHTPVVA 255


>gi|167837200|ref|ZP_02464083.1| exodeoxyribonuclease III [Burkholderia thailandensis MSMB43]
          Length = 258

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 88/304 (28%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N+L+                     +  +    D D++ LQE  +       
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQELKIPDEKFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      +  +++ ++  N            AI  R +           +     F  + 
Sbjct: 45  EALEAAGYRSWFAGQKTYN----------GVAILARARLPFDEADVVRNIPG---FEDSQ 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +   ++     + ++  +  +   LDS +  Y        Q    L+ W+ ++ + 
Sbjct: 92  QR-LIAATID----GVRIVSAYFPNGQALDSEKFVYK------MQWLDALQAWLKRELQR 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNA 247
                + GD+N        +D         + P +                +  D     
Sbjct: 141 YPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFDQPEKT 200

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++     +     +        D +    ++ SDH P+
Sbjct: 201 FTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPRTWEQPSDHTPV 253

Query: 299 SIDY 302
               
Sbjct: 254 VAQI 257


>gi|150008523|ref|YP_001303266.1| hypothetical protein BDI_1909 [Parabacteroides distasonis ATCC
           8503]
 gi|256841460|ref|ZP_05546967.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|149936947|gb|ABR43644.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|256737303|gb|EEU50630.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 246

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 88/308 (28%), Gaps = 67/308 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +++ +  L   L+   + + +    +R++S+NI                    ++   + 
Sbjct: 1   MKRILFLLTIALLNLGSGLCKTRQSLRIMSYNIR-----------IGIGMDQQTNLKRIA 49

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +    +  D V LQE+                   S         + +     T +    
Sbjct: 50  EVINKIQPDYVGLQEVD------------------SVCERSGWINQYAELARLTGM---Y 88

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                  +    L    + SR   R    + +    +    L +   ++   ++  +   
Sbjct: 89  PIFAPATERSKGLYGIAALSRKKPRSYQYIPLPGKEEPRTFLCLEYPNYTLCNTHFSLDP 148

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIR 236
            S      +   ++      K    P +I GDFN + +          W+ +        
Sbjct: 149 DS------RLASIRLINETMKSENKPILITGDFNMEPDSKEFKAMKQTWRLLSD------ 196

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                        +   ++ +DY   D      +I +   +I            + SDH 
Sbjct: 197 ------PTLETYPSDHPRLRLDYIFGDLRHEFRIINDQVIDI------------QSSDHL 238

Query: 297 PISIDYDF 304
           PI ID  F
Sbjct: 239 PIYIDVLF 246


>gi|77736625|ref|NP_001029987.1| deoxyribonuclease gamma [Gallus gallus]
 gi|73532981|gb|AAZ76744.1| DNase-gamma [Gallus gallus]
          Length = 307

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 87/306 (28%), Gaps = 36/306 (11%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +L    F + C    +  +R+ S+N+ +  E         +          + +      
Sbjct: 1   MLLFALFSLLCFNP-SLSLRICSFNVRSFGE---------AKIGRAEVLDAVVKIISRC- 49

Query: 66  ADIVFLQEMGSYN------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            DI+ L E+           V ++  +        +  +     R S  + + A   R+ 
Sbjct: 50  -DIMLLMEIKENKNRMCPLLVQQLAGQTKGNREEYSCVVSGRLGRKSYKEQY-AFLYRRN 107

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            V V +Q+Y     +     A +R    +        +    I         + E     
Sbjct: 108 LVSV-KQTYQYPDTQPGDEDAFSREPFVVWFRSPKTAVKEFAIVPLH----TAPEMAVRE 162

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              L        + W          FV  GDFN   +Y+         +  +        
Sbjct: 163 IDELYDVYLDIKQHW------DTENFVFMGDFNAGCSYVPRKHWKNIRLRTSSEFAWLIG 216

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHC 296
           + +             P D  V+      + ++  S +   +      S  + L  SDH 
Sbjct: 217 DTNDTTVRRST---SCPYDRIVVSGEQLSQAVVPHSATIFDFQTAFQMSEEQALGVSDHF 273

Query: 297 PISIDY 302
           P+  + 
Sbjct: 274 PVEFEL 279


>gi|33152736|ref|NP_874089.1| exonuclease III [Haemophilus ducreyi 35000HP]
 gi|1388153|gb|AAB49625.1| exonuclease III [Haemophilus ducreyi]
 gi|33148960|gb|AAP96478.1| exodeoxyribonuclease III [Haemophilus ducreyi 35000HP]
          Length = 267

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L         D++ LQE  +   +   
Sbjct: 1   MKFISFNINGL----------------RARPHQLEAIINKHQPDVIGLQEIKVADEDFPH 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     + +F                  H  +A+  K   +  +        D+  R  
Sbjct: 45  QLVEHLGYHVF------------YHGQKGHYGVALLTKKQPLTIRKGFPNDTADAQKR-- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +  +   + VL+       F       +       ++    L+ ++     +
Sbjct: 91  ---MIMAEINTDFGILTVLN-----GYFPQGENRQHETKFPAKAKFYADLQHYLETALTA 142

Query: 202 LVPFVIAGDFNR---------------------KINYLGNNDDFWKTIDPNDSLIRFPKE 240
             P +I GD N                      K ++L    ++   +     +  F   
Sbjct: 143 YNPIIIMGDMNICSTDLDIGIGEANRKRWLREGKCSFLPEEREWLDRLYHYGLVDTFRAM 202

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  +       +           ID  +         ++          D      ++
Sbjct: 203 HPTTTDQFSWFDYRSKGFNDNRGLRIDLILASTTLANHCVETGI-------DLEIRAMEK 255

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 256 PSDHAPIWAVF 266


>gi|126739465|ref|ZP_01755158.1| exodeoxyribonuclease III [Roseobacter sp. SK209-2-6]
 gi|126719565|gb|EBA16274.1| exodeoxyribonuclease III [Roseobacter sp. SK209-2-6]
          Length = 268

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 84/308 (27%), Gaps = 69/308 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ S+NIN                   +    L Q+      D+V LQE+         
Sbjct: 1   MKIASFNING----------------IKARAAALPQWLDEAQPDVVLLQEIKSVDEAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F +  + +                      +A+  K      +        D  +R  
Sbjct: 45  ELFEERGYNV------------ETHGQKSFNGVAILSKLPLEDIRRGLPGDDSDEQARW- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQAQWLKDWITQK 198
               +E  V +  + + +  ++L +   ++             +      + L       
Sbjct: 92  ----IEATV-VGKQALRICGLYLPNGNPVELEVDGSPVAGGKYAYKLAWMERLHKRAQDL 146

Query: 199 KESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                P ++AGD+N                   +   +   ++ I        F      
Sbjct: 147 LAEETPALMAGDYNIIPQAEDAKRPEAWREDALHRPESRAAYQQIVNLGFTEAFRARHQG 206

Query: 244 RCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             + +                ID+F++   A   L            D      ++ SDH
Sbjct: 207 PGHYSFWDYQAGAWNRDDGIRIDHFLLSPQAADLLRDCQI-------DKEIRGREKPSDH 259

Query: 296 CPISIDYD 303
            PI +D D
Sbjct: 260 VPIWVDLD 267


>gi|90406919|ref|ZP_01215110.1| exodeoxyribonuclease III [Psychromonas sp. CNPT3]
 gi|90311961|gb|EAS40055.1| exodeoxyribonuclease III [Psychromonas sp. CNPT3]
          Length = 269

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 78/309 (25%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  +N +   
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHNDM--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   V  Q         +      +
Sbjct: 42  -------FPLEAVEKMGYHVYYHGQKAHYGVAMLCKKEPVSVQ-----YGFPTDDDEHQK 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + +  E    +   +     +  F      T+        Q  + L  ++     +  
Sbjct: 90  RMIMVTFEDANGEKTTIL----NGYFPQGESQTHEIKYPYKRQFYKDLNTYLESHHCAED 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                        ++      + K +        F     
Sbjct: 146 NVIIMGDINISPLDLDIGIGEINAKRWLKTKKCSFQPEERQWLKKLMDFGFTDTFRLLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  Q      +           D      ++ S
Sbjct: 206 EVSDQYSWFDYRSRGFDDNRGLRIDVILATQKIADNTLNSGI-------DYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 259 DHAPIWTEF 267


>gi|84500937|ref|ZP_00999172.1| exodeoxyribonuclease III [Oceanicola batsensis HTCC2597]
 gi|84391004|gb|EAQ03422.1| exodeoxyribonuclease III [Oceanicola batsensis HTCC2597]
          Length = 260

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 83/302 (27%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN                   + +  L  +      D+V LQE+ S +     
Sbjct: 1   MRIATFNING----------------IKARHAALTTWLDEAGPDVVLLQEIRSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++           +A+  K               D  +R    
Sbjct: 41  ------NFPREIFEDRGYNVETHGQKSFNGVAILSKLPLEDVTRGLPGDDADDHARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V      + V  ++L +       +  Y  +        + L++   Q      
Sbjct: 92  --IEATVVGEHAALRVCGLYLPNGNPAPGPKYDYKLA------WMERLRERARQLIAQEE 143

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++AGD+N                     L + D + + ++   +     +       +
Sbjct: 144 PALMAGDYNIIPQPEDVARPDAWRDDALFRLDSRDAYRRVLNLGFTEAFRTRHPAPGHYS 203

Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +         N I ID+ +M       +                   ++ SDH P+ +
Sbjct: 204 FWDYQAGAWQRNNGIRIDHILMTPQCADLMQDAGIE-------KELRGREKPSDHVPVWV 256

Query: 301 DY 302
           D 
Sbjct: 257 DL 258


>gi|88799872|ref|ZP_01115445.1| hypothetical protein MED297_03080 [Reinekea sp. MED297]
 gi|88777452|gb|EAR08654.1| hypothetical protein MED297_03080 [Reinekea sp. MED297]
          Length = 551

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 93/320 (29%), Gaps = 53/320 (16%)

Query: 21  AQKVRLVSWNINTLSEQEG------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           A+ +RL   N+N L    G            + ++       L Q    LDAD++ L E+
Sbjct: 248 ARALRLAGSNVNNLFNGNGRGSGFRDGRGPENQRQYARKLNRLSQAFVRLDADVIALNEV 307

Query: 75  GSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
            +              ++  +   + +     ++R            I  A+    + V 
Sbjct: 308 ENDGFGQNSTLIDLIESLNHLTGDDRYQAVTFSDRQTGTD------AIQNAMLFNARTVV 361

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF----LDSLENT 176
            + Q   +      +    +R  +    E   +G++  V+  HLKS              
Sbjct: 362 KVGQPRSITELP-EWENRWHRPFMLQEFEAIRSGQRFSVVVAHLKSKGSRCPEDTDQSVQ 420

Query: 177 YSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
              +C          L  W++       P  + GDFN   N                   
Sbjct: 421 QEGACMVKRLNAVDRLLGWLS--IPEDQPAFLIGDFNAYANERPIRKL--------ARAG 470

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS-----------EILYNEDD 284
                  +   +         +DY + +  A + ++Q  +            ++ +    
Sbjct: 471 WKTLVGTANAYSYVYDGQPGVLDYVIGNAMAERLVLQSGYWPINSGQVAGATQVPFLSRL 530

Query: 285 IKSRGKRLSDHCPISIDYDF 304
                   SDH P+ ID  F
Sbjct: 531 RLPEFYGFSDHDPVFIDVSF 550


>gi|261880757|ref|ZP_06007184.1| exodeoxyribonuclease III [Prevotella bergensis DSM 17361]
 gi|270332533|gb|EFA43319.1| exodeoxyribonuclease III [Prevotella bergensis DSM 17361]
          Length = 267

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 86/303 (28%), Gaps = 60/303 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N L       +                 Y   LDAD   LQE     A    
Sbjct: 1   MKFVSWNVNGLRA----CVKPKVDAEGNVISKGFEAYFNELDADFFCLQETK-MQAGQLD 55

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N +  +++           +    ++  A+  K+  +       +   D+  R    
Sbjct: 56  LQFNGYRSYWN----------YAERKGYSGTAIYTKHEPMNVACGMGIEEHDNEGR---- 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + ++++++  +       E           +  +  + +I +      
Sbjct: 102 -----VITLEYPEFYLVNVYTPNSQESLPGEVKPKR-LGYRMKWEEDFRAYIKR-LNETK 154

Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA-------NK 249
           P ++ GD N     +   +         +   +     I                     
Sbjct: 155 PVIVCGDLNVAHQEIDIKNAKTNRNNAGFTDEEREKMTILLDNGFIDTFRTMYPEQVIYS 214

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ +     ++       +Y            SDHCP+ +
Sbjct: 215 WWSYRFRARERNTGWRIDYFLVSERLRNQIVDARIHTEIY-----------GSDHCPVEL 263

Query: 301 DYD 303
           + +
Sbjct: 264 ELN 266


>gi|29828508|ref|NP_823142.1| exonuclease [Streptomyces avermitilis MA-4680]
 gi|29605612|dbj|BAC69677.1| putative exonuclease [Streptomyces avermitilis MA-4680]
          Length = 262

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 79/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE  +       
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCIQETKTTAE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +            +AV  +          L G          R
Sbjct: 41  ------QFPADALRELGYESAVHATGRWNGVAVISRVGLEDVVRG-LPGDPGFDGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   ++     Y        Q  + LK  +        
Sbjct: 94  A-----LSATCGPVRVWSVYVPNGREVEHPHYAYK------LQWFEALKAAVAGDAAGSR 142

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GDFN         D                   T+         P+      +  
Sbjct: 143 PFAVMGDFNVAPTDDDVYDVAAFEGLTHVTPAERAALATLREAGLSDVVPRPLKYE-HPY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    ++   K +            D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVKDAYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|269122882|ref|YP_003305459.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis
           DSM 12112]
 gi|268314208|gb|ACZ00582.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis
           DSM 12112]
          Length = 598

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 92/323 (28%), Gaps = 62/323 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           + +VS+NI   S  +       + +R       +    +  + DI+ L E+         
Sbjct: 291 LNVVSYNIENFSHVD-------TPERVDELANQVATILQ--NPDILGLIEVGDDDGQKES 341

Query: 75  ------GSYNAVAKVFPKNTW--CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-- 124
                  +  A+ K   + T     F S + +           I   I  R   + V+  
Sbjct: 342 EIVSSNENMEALVKAIKEKTGIDYGFVSVDPMDGKDGGWPAMHIRNVILYRIDKLNVVGF 401

Query: 125 -------------------QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
                                  P             R+ +    E NGK I+V+  HLK
Sbjct: 402 NQGDAITDTEVIKDGDNVRLTYNPGRIGNQDKIWEEVRKPLVAQFEYNGKNIFVIANHLK 461

Query: 166 SFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLG 219
           S    D +          S  +   + +++ +++            ++ GD N       
Sbjct: 462 SKRSDDKVYGVNHPVIRKSEDVRIPEGKYINNFVKDILSKDDKATVIVLGDMNDFEFSKT 521

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
             +     I+ ++ +        +             +D  ++++     +  +      
Sbjct: 522 TKN-----INGDELVDVISLLPKNERYTYVYQGASQTLDNIMINKKYKDNVNIDVIRV-- 574

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
               +        SDH PI I +
Sbjct: 575 --NSEFLKEQGSFSDHDPIFIQF 595


>gi|238020559|ref|ZP_04600985.1| hypothetical protein GCWU000324_00445 [Kingella oralis ATCC 51147]
 gi|237867539|gb|EEP68545.1| hypothetical protein GCWU000324_00445 [Kingella oralis ATCC 51147]
          Length = 240

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 80/288 (27%), Gaps = 58/288 (20%)

Query: 24  VRLVSWNIN-------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R++S+NI         LS    +                + ++    D D+V LQE+  
Sbjct: 2   MRILSYNIQAAIASTSYLSYALRLHRQVLPSPAKRQVLADIARFIS--DFDVVCLQEIDF 59

Query: 77  YNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +    +  +          R           +  K+      + PL     
Sbjct: 60  GGLRNGFLSQAQQLLAQTPFSHSVWQVNRVVGKLSRHGNLILSKSPMREVVNEPLPS--- 116

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              +   R  +   VE    ++ V ++HL                      Q + ++ ++
Sbjct: 117 ---KIKGRGMLAAEVETARGRLVVANVHLSLGAVD----------------QFRQIR-FV 156

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            QK  +     + GDFN   +         + +             DS    +   + K 
Sbjct: 157 RQKLAAFENVCLMGDFNCPPD--------AEQLCLLTDHDYARLTLDSPTYPS--WKPKQ 206

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +D+  +  +         F                 SDH P+ ++ D
Sbjct: 207 SLDHIFVKGSLKGACHVSQF---------------AASDHLPVVLEVD 239


>gi|119513165|ref|ZP_01632214.1| Exodeoxyribonuclease III xth [Nodularia spumigena CCY9414]
 gi|119462186|gb|EAW43174.1| Exodeoxyribonuclease III xth [Nodularia spumigena CCY9414]
          Length = 260

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 80/305 (26%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  +      D++ LQE    +A    
Sbjct: 1   MKIATWNVN----------------SIRTRLEQVIFWLSENPIDVLCLQETKVVDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAKDSFSRAG 141
                     S    + +    S    +  +A+  +           P+L   D      
Sbjct: 41  ------DFPRSPFEELGYHVYFSGQKAYNGVALISRQPLTDVSPGFTPILPNIDPLWDEQ 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R    ++       I ++++++ +   + S +           +    L++++     S
Sbjct: 95  KRVITGVI-----DGIRIVNLYVPNGSAVGSEKY------EFKLRWLTVLREYLQTLLLS 143

Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                + GDFN  +                         + +        F K      +
Sbjct: 144 QPGICMCGDFNIALAAEDIHENANPDNHIMSSEPERQGLRDVLELGFADAFRKFTTEGGH 203

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  +    Y+                      + SDH P
Sbjct: 204 -YSWWDYRAAGFRRNRGWRIDHHYLTPTLYESAKSCIIDITPRKLP-------QPSDHTP 255

Query: 298 ISIDY 302
           + +++
Sbjct: 256 VIVEF 260


>gi|114766201|ref|ZP_01445201.1| Exodeoxyribonuclease III [Pelagibaca bermudensis HTCC2601]
 gi|114541572|gb|EAU44615.1| Exodeoxyribonuclease III [Roseovarius sp. HTCC2601]
          Length = 260

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 85/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  +      D+  LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------IKARIGALTDWLDEAQPDVALLQEIKS---VDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +                        +A+  K              +D  +R    
Sbjct: 42  FPREHF-------EERGWQVETHGQKSFNGVAILSKLPLEDVTRGLPGDDEDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V      + +  ++L +   +   +  Y  +        + L+    +   S +
Sbjct: 92  --IEATVIGESHAVRLCGLYLPNGNPVPGPKYDYKLA------WMKRLEARARELLASEM 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                   YL      ++ I        F        + +
Sbjct: 144 PAVMAGDYNVIPQAEDAAKPQAWIEDALYLPETRAAFRRILNLGFTEAFRARTQGPGHYS 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N I ID+ ++   A   +            D       + SDH P+ I
Sbjct: 204 FWDYQAGAWQRNNGIRIDHLLLTPQAADLMTDVQI-------DRDIRGRDKPSDHVPVWI 256

Query: 301 DY 302
           D 
Sbjct: 257 DL 258


>gi|91793693|ref|YP_563344.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans
           OS217]
 gi|91715695|gb|ABE55621.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans
           OS217]
          Length = 475

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 83/296 (28%), Gaps = 34/296 (11%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +         + ++++NI  L                     LL Q  +    D++ LQ
Sbjct: 194 ALATDPIANNSLTVMTYNIWAL---------PVIASHINERLALLPQKMRGH--DVLMLQ 242

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ +    A +        + +     +             + +  +   V Q  +    
Sbjct: 243 EVFAPGRGAFLRALAQEYPYQTRMLDKSGVNIYDG-----GVMIVSRYPIVAQAQFVYPD 297

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              +   A  +      V   G+   V   H  SF    +  N          +Q + ++
Sbjct: 298 CSGTDCFAD-KGINYAQVIKQGEAYHVFATHTASFDTDVARSN--------RQKQFKQMR 348

Query: 193 DWITQ-KKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSL-------IRFPKEKDS 243
           ++       +    +  GDFN     +  +    +  +                P+  + 
Sbjct: 349 EFAHSLAIPADETVIYGGDFNVNKRKFEDDYQQMFANLKAKQPSYSGYIESTFDPRINEF 408

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                    N   +DY V+     +    ++  ++  +      +   LSDH P+ 
Sbjct: 409 AGTPLSGGENVEYLDYIVISDEYAQTQSNDNDVKVPRSSAASLWQKWNLSDHFPVV 464


>gi|190150302|ref|YP_001968827.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|189915433|gb|ACE61685.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 275

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 81/311 (26%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN L                 +    L    +    D++ LQE  +   +   
Sbjct: 9   MKFISFNINGL----------------RARPHQLEAIIEKHQPDVLGLQEIKVADEDFPW 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     + +F+                 H  +A+  K   +  +        D+  R  
Sbjct: 53  DLVNHLGYHVFHH------------GQKGHYGVALLTKKEPLAVRKGFPTDNADAQKR-- 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + VL+       F      ++        +    L+ ++  +   
Sbjct: 99  ---MIMADIETEFGVLTVLN-----GYFPQGENRSHETKFPAKEKFYADLQHYLESELSP 150

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
             P VI GD N                          L    ++   +     +  F   
Sbjct: 151 ENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFLPEEREWLDRLYSYGLIDTFRAM 210

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +  +   +  ++          D      ++
Sbjct: 211 NPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAERCVETGI-------DLEIRAMEK 263

Query: 292 LSDHCPISIDY 302
            SDH P+   +
Sbjct: 264 PSDHSPVWAVF 274


>gi|163841804|ref|YP_001626209.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209]
 gi|162955280|gb|ABY24795.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209]
          Length = 267

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/308 (9%), Positives = 72/308 (23%), Gaps = 69/308 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                 +    +  + +  D D++ +QE    +     
Sbjct: 1   MKIATWNVNSL----------------RARADRVEDWLRRTDIDVLAIQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       +            +A+  K      +                 
Sbjct: 41  ------NFPWELFENNGYEVAHFGFSQWNGVAIASKVGLDDVERTFPGQPAFGKPGVEPE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201
           +     +      + V  +++ +   LD     Y        +  + L +       K+ 
Sbjct: 95  QEGRA-IAATCGGVRVWSLYVPNGRALDDPHMPYK------LEWLRVLNEEAKGWLAKDP 147

Query: 202 LVPFVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244
                + GD+N                             ++  +               
Sbjct: 148 NAQIALVGDWNIAPQDDDVWDVKYFIDEGLTHFSAPERAAFQAFEAAGFTDVVRPSHPGP 207

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    K           ID+ +        ++           D  + +GK  SDH
Sbjct: 208 -GVYTYWDYKQLRFPKKEGMRIDFIMASPALAARVV-------HTEIDREERKGKGASDH 259

Query: 296 CPISIDYD 303
            P+  +  
Sbjct: 260 APVIAELS 267


>gi|94971952|ref|YP_593992.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300]
 gi|94554003|gb|ABF43918.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300]
          Length = 254

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 76/302 (25%), Gaps = 75/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WNIN+L+                     L Q  +    D++ LQE    +     
Sbjct: 1   MKLATWNINSLNV-------------------RLPQVLETHRPDVLALQETKVVDE---- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++   +    + ++ +  +      Q                R
Sbjct: 38  ------RFPLEPLEALGYAAAFAGQKTYNSVDLLARAPLEAVQ------MGIPGLEDEQR 85

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V      + V+ +++ +     S +  Y  +             W+  +  +  
Sbjct: 86  RVLVATV----GGVRVVCLYVPNGQAPHSEKYHYKLA------WLDAAHAWLRDELAAHE 135

Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
              + GDFN                + +                     +  +    A  
Sbjct: 136 RLAVLGDFNVAPEDRDVHNPKRWAGQVLVSGPEREAFRGLLDVGFQDAFRLFEEPPGALS 195

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+ ++     +              D      +R SDH P+  
Sbjct: 196 WWNYGALAFPRNWGLRIDHVLVSPALAQVCQACWV-------DREPRAHERPSDHAPVVA 248

Query: 301 DY 302
           ++
Sbjct: 249 EF 250


>gi|308187049|ref|YP_003931180.1| Exonuclease III [Pantoea vagans C9-1]
 gi|308057559|gb|ADO09731.1| Exonuclease III [Pantoea vagans C9-1]
          Length = 272

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 81/311 (26%), Gaps = 73/311 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L+   +    D++ LQE         +
Sbjct: 5   MKFVSFNINGL----------------RARPHQLQALVEQHQPDVIGLQE---TKVHDDM 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  K   V                   R
Sbjct: 46  FP-------LEEVAKLGYHVFYHGQKGHYGVALLTKAQPVSVSR-----GFPDDDEESQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +        +  + L+  +T    +  
Sbjct: 94  RLIMAEIPSPIGDITVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQRLLTDDLPADK 148

Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P ++ GD N                        ++L    ++   +     +  + +   
Sbjct: 149 PVLVMGDMNISSTDLDIGIGEESRKRWLRTGKCSFLPEEREWMDRLLGWGLVDTWREHNP 208

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  +N     ++          D      ++ S
Sbjct: 209 EVADRFSWFDYRSKGFDDNRGLRIDLVLASKNLAAHCVESGI-------DYEIRGMEKPS 261

Query: 294 DHCPISIDYDF 304
           DH PI   + F
Sbjct: 262 DHAPIWSTFRF 272


>gi|265766011|ref|ZP_06094052.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           2_1_16]
 gi|263253679|gb|EEZ25144.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           2_1_16]
          Length = 344

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 83/326 (25%), Gaps = 56/326 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+V WN     +    SL  +           + +R       + +    +       
Sbjct: 24  PFRVVFWNTENFFDTRHDSLKNDMEFLPHSMRHWNHRRYKKKLDNVARTLTAIGEWNFPA 83

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ L E+ +   +  +     +            +       I  A+  ++   ++L   
Sbjct: 84  LIGLCEVENDTVMRDL---TLYSPLKEAGYRYVMTHCSDLRGIDVALLYQRDRFKLLS-- 138

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           Y  L   +       R  + +  + + G  + ++  HL S             S      
Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGV------RQSEPYRLY 192

Query: 187 QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT------IDPNDSLIRFP 238
            AQ LKD              +I GDFN                            +   
Sbjct: 193 AAQKLKDAADSLINVRPSAKLIIMGDFNDYPTDKSVVQVLQALSPEVSTHHDRLYHLLAR 252

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-------------------- 278
           K KD    + K       +D+ ++              E                     
Sbjct: 253 KAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTEEKKANVARLPFLLTKDEKYGGM 312

Query: 279 -LYNEDDIKSRGKRLSDHCPISIDYD 303
             +         +  SDH P+ +D++
Sbjct: 313 QPFRTYVGMKYQEGYSDHLPVYVDFE 338


>gi|254427925|ref|ZP_05041632.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881]
 gi|196194094|gb|EDX89053.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881]
          Length = 310

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 102/323 (31%), Gaps = 35/323 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKV---R-----------LVSWNINTLSEQEGVSLWKNSV 47
           +R ++L ++        +   ++   R           L + N+  L +    S   + V
Sbjct: 1   MRLFILIVLTISPLLAPADCAQLAPARGVPAASDQTWALATLNLWRLRDDHKNSELDDPV 60

Query: 48  KRT--TSDYTLLRQYAKN--LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
                 +    +  +         ++ LQE+ +   + ++  + +   +          +
Sbjct: 61  SSVLLRARINAVAGFIVEDLNAPHVLALQEVENQAVLDRLADRLSQRGY---RYRSALRE 117

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
            +  + +  AI  R         +    G +        R  + + +E       V+   
Sbjct: 118 GNDPSGMDVAIMYRSPVNIGSVSTL-FSGQQFHGHALYARPPLVVALEAPLAANVVVVHW 176

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
             +     +  +           QA  L +W+T +     P ++AGDFN   +  G   D
Sbjct: 177 RSARNLKKAWVH------EKRQTQAALLANWVTMQ---TSPLIVAGDFNTTWDE-GRFSD 226

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
             +  + +  L  +    +    + ++      +D+  +       + + + S       
Sbjct: 227 SHERFEQSGLLNLWSFLPEKERYSFRHRCRPQALDHIWVSPGLKPSVSKVAVSRGNAGRY 286

Query: 284 DIKSRGKR---LSDHCPISIDYD 303
           D     +    +SDH  + + ++
Sbjct: 287 DSLYGSQGVAPISDHDALVVYFE 309


>gi|92113745|ref|YP_573673.1| exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043]
 gi|91796835|gb|ABE58974.1| Exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043]
          Length = 276

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 71/313 (22%), Gaps = 78/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +RLVS+NIN                   +    L         D++ LQE  +       
Sbjct: 1   MRLVSFNING----------------IRARLHQLEALVDAHAPDVIGLQETKVQDSEFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + + +                 H  +A+  +            G  D    A 
Sbjct: 45  EAVEALGYHVAFH------------GQKGHYGVALLTRQAPEAV----YYGLPDDGEEAQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     L   +G+ + V +       F       +             L   + ++   
Sbjct: 89  RRLIGVRLACDDGEPLTVYN-----GYFPQGENVDHPTKFPNKRDFYARLTTLLQERHTP 143

Query: 202 LVPFVIAGDFNRKINYLGN---------------------NDDFWKTIDPNDSLIRFPKE 240
                + GDFN     +                         ++   +        +   
Sbjct: 144 SERLAVMGDFNISPADIDIGIGEANRKRWLREGKTSFQPVEREWLARLVDWGLSDCYRLR 203

Query: 241 KDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                +       +             IDY ++     + +            D      
Sbjct: 204 YPEVDDRFSWFDYRSRGFERDPKRGLRIDYIMVTPALCERVTDAGI-------DYELRGI 256

Query: 290 KRLSDHCPISIDY 302
           +R SDH P+    
Sbjct: 257 QRPSDHAPVWAQL 269


>gi|254719412|ref|ZP_05181223.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           83/13]
 gi|265984415|ref|ZP_06097150.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13]
 gi|306839189|ref|ZP_07472006.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           NF 2653]
 gi|264663007|gb|EEZ33268.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13]
 gi|306405736|gb|EFM61998.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           NF 2653]
          Length = 369

 Score = 92.3 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 97/366 (26%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S ++N                +  R       +          
Sbjct: 2   FTIATFNVENLVRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMT 61

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 62  ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        S+  L   D                 R   R  + + + I G+ +
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQPELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNR 213
            +   HLKS     +  +  + S  +   +A+ ++  I +K      +   ++I GDFN 
Sbjct: 182 SLFVAHLKSMSGARNGLDGRTSSHPVRLAEARAVRRIIEEKFGIDRVAERRWLICGDFND 241

Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +                  
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 257 ----IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +DY +                      +       + +           + SDHCP
Sbjct: 302 HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           +S+  +
Sbjct: 362 VSVTLN 367


>gi|295688634|ref|YP_003592327.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
 gi|295430537|gb|ADG09709.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
          Length = 323

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 94/315 (29%), Gaps = 38/315 (12%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
                   +    + + +WNI       +   S   +S +R      L+ +       DI
Sbjct: 22  VLAQIPPKTDGDNLLIGTWNIRAFGNLTKTWASQPGDSPRRDFHACVLIAEVLSRF--DI 79

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV----- 123
           V +QE+ +   +  +              + + +     N    A     + V++     
Sbjct: 80  VAIQEVKAN--LRALRHTLKRLGPDYGFVMTDVTYGQPGNGERLAYVFDTRRVKLSGLAC 137

Query: 124 -----LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                     P     ++F R   R    +  +   + + ++ +H+              
Sbjct: 138 ELVVPEDIDTPFSSPANAFQRQFVRTPYAVGFQAGEQTVVLVTLHVIYG-------AASQ 190

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
              + L+  A+WL+ W  Q+ +     +  GDFN       + D  W+            
Sbjct: 191 DRVAELTGIAKWLRQWAEQEDDFGHNLIAMGDFNI----DRHGDPLWQAFTSTGLTPAPG 246

Query: 239 KEKDSRCNANK--NLRNKIPIDYFVM------DQNAYKFLIQE---SFSEILYNEDDIKS 287
             K  R  ++       K   D                   Q    +F  ++  + +   
Sbjct: 247 LLKVPRTLSSSLDTPDLKSFFDQIAWFETVRGRPYLSLKYRQAGGVNFQGVVLKDLNRTE 306

Query: 288 RGKRLSDHCPISIDY 302
              R+SDH P+ +++
Sbjct: 307 LSWRISDHYPLWVEF 321


>gi|319954984|ref|YP_004166251.1| endonuclease i [Cellulophaga algicola DSM 14237]
 gi|319423644|gb|ADV50753.1| Endonuclease I [Cellulophaga algicola DSM 14237]
          Length = 1976

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 85/309 (27%), Gaps = 39/309 (12%)

Query: 22   QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            +   +V+WNI    ++       N +         +    K +DAD+  ++E+       
Sbjct: 1386 KTFDVVAWNIEWFGDETNSPTVGNPLSDAIQK-DSVLTILKKMDADVYAVEEISDDVLFG 1444

Query: 82   KVF-PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--------------- 125
            ++    N +    S    +++    +              V V+                
Sbjct: 1445 QMVSEMNGYDYVLS--EAVSYPNDATGTQQKVGFIYNTATVSVVATKPLLASIHPYYNGG 1502

Query: 126  -----QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                   YP       ++       +   V + G       + L +     S   +    
Sbjct: 1503 DATALSDYPDADKTRFYASGRLPFLMTADVTLGGVTKQFDIVALHARANSSSGPQSRYD- 1561

Query: 181  CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSL 234
              +     + LKD +  +       ++ GD+N  + +            F   +    + 
Sbjct: 1562 --MRKYDVEVLKDTLDAQFA-DSNLIVLGDYNDDVAFTVADEVSSTVSTFDAYVQDTVNY 1618

Query: 235  IRFPK-EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                K   +    +     N   ID+  +        I  S S      D        +S
Sbjct: 1619 TILTKVLSEGDYRSYVFRENM--IDHITVSNELSASYIDGSVSVGYEFYDT--DYTTTVS 1674

Query: 294  DHCPISIDY 302
            DH P+S  +
Sbjct: 1675 DHFPVSARF 1683


>gi|301121913|ref|XP_002908683.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099445|gb|EEY57497.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 388

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 71/304 (23%), Gaps = 45/304 (14%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             +S    ++++++N+      +G++ W+            +          I+  QE  
Sbjct: 103 TLSSSPLSLKIMTFNLRFAGTGDGLNSWRYRK-------DHVADIIDRYHPAIMGTQEGL 155

Query: 76  SYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +    + +  F          ++   +    A+  R  +        P     
Sbjct: 156 KAQLAELESLLNHPYERFGVEREENGEFEQIFYDA---AVLERLDDGNFWLSEEPDTPGT 212

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             +  A  R        +   +  +   + +            S       QQ       
Sbjct: 213 QGWDAACVRMVTWGKFRLRATQQELFVFNTQLDHVGPKSREEGSKLLWARIQQI------ 266

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                    PF + GDFN   +    +    +   P          K     +       
Sbjct: 267 -----SGDAPFFLMGDFNTYRHTSTYSYFTSQEGGPQLREAWPEAAKQIGDVSYTYHGWA 321

Query: 255 I--------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+                  +         +G+  SDH PI  
Sbjct: 322 GVKNDGEKTAVRAANHIDWIFYRPQM---------KVLATEVITEDRKGRYPSDHYPIQA 372

Query: 301 DYDF 304
           +  F
Sbjct: 373 ELLF 376


>gi|288928392|ref|ZP_06422239.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288331226|gb|EFC69810.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 321

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 83/313 (26%), Gaps = 46/313 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD------- 65
             LV  N   L +    SL  +           +  R       + Q             
Sbjct: 12  FTLVQLNCENLFDCRHDSLKNDQEFLPTAYRHWTPSRYWKKLNRIGQEIVACGGEGKQWR 71

Query: 66  -ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
             D+V L E+ + + +  +  ++             +    S +     +A+        
Sbjct: 72  LPDLVALCEVENDSVLHDLTRRSLLRTARYE-----YVMTHSPDLRGIDVALLYSPFTFA 126

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                 L  K        R  +    V   G  + V  +H  S    ++    Y  + + 
Sbjct: 127 LIKSYALRIKPPTGMRPTRDILYAEGVTFGGDTLHVFVLHAPSRAGGEANTRPYRMAVAN 186

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
               A    D I Q        V+ GDFN   +           +     +       + 
Sbjct: 187 RLCTA---IDSIRQG-NPTANIVVTGDFNDYGDAPALRLLAANGLTD---VSANAIGING 239

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------------ 291
                +       +D+  + Q  ++  +     +  +  +D +  G +            
Sbjct: 240 AKGTYRYQGEWGSLDHVFVSQKIHEKGVSCHIFDAPFLMEDEEKYGGKRPWRTYQGPKYL 299

Query: 292 --LSDHCPISIDY 302
              SDH P+ + +
Sbjct: 300 GGFSDHLPVVVTF 312


>gi|89889844|ref|ZP_01201355.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteria
           bacterium BBFL7]
 gi|89518117|gb|EAS20773.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteria
           bacterium BBFL7]
          Length = 376

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/322 (11%), Positives = 79/322 (24%), Gaps = 53/322 (16%)

Query: 25  RLVSWNINTLSEQEGVSLWKN------------SVKRTTSDYTLLRQYAKNLDAD----- 67
            +  +N+  L + E      +                     T + +  + + AD     
Sbjct: 54  TVAFYNLENLFDTEDDPTINDEASPMMEMAEGLREDVYQKKLTNMARVLRKIGADKSGTA 113

Query: 68  --IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
             ++ + E+ +   +  +        +       +   R     I  A+  +K   +V+ 
Sbjct: 114 PALIGVCEVENRKVLEDLASHELLRDYDYGIEHYDSPDR---RGIDVALLYKKSEFKVIN 170

Query: 126 QSYP--LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                  +    S  R   R  + +  E+NG  + V+  H  S    +        + + 
Sbjct: 171 SQSRRLDISDPGSGRRIFTRDQLVVTGELNGDPMSVIVNHWPSRSGGEMRSRAKRVAAAA 230

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-----LIRFP 238
           L+QQ            +     +  GD N                D  D         + 
Sbjct: 231 LNQQIIDSLHVTNAMAK----IMTMGDLNDDPTNESVLKTLNAQQDQEDVKPQMIYNPYI 286

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL--------------------IQESFSEI 278
           +      N           D  ++     K                          +   
Sbjct: 287 QMLKDGFNTLSYRDAGNIFDQIMLTYPLLKKADQEGYFYYHAGIYNPSFMTNKSGRYKGY 346

Query: 279 LYNEDDIKSRGKRLSDHCPISI 300
                +  S     SDH P+ +
Sbjct: 347 PLRSYNNGSFTNGFSDHFPVYV 368


>gi|167647089|ref|YP_001684752.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31]
 gi|167349519|gb|ABZ72254.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31]
          Length = 262

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 84/302 (27%), Gaps = 65/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    + ++ ++   D+  LQE+   +     
Sbjct: 1   MRIATWNVN----------------SVNARLERVLEWFESAAPDVAVLQEIKCIDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++        +  +A+  K      +   L    D      +R
Sbjct: 41  ------KFPTEAFERLGYNVAVHGQKTYNGVAMLSKFPLEDVRRG-LPFLHDDEVDEQSR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E ++        ++ I+L +   +D+ +  Y  +        + L            
Sbjct: 94  Y-IEAVIGAP-TPFRMVGIYLPNGNPVDTEKFDYKLA------WMRRLHAHAQGLLALEE 145

Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCNANK 249
           P VIAGD+N               ND  ++              L     + D       
Sbjct: 146 PLVIAGDYNVIPEVEDVANPEAWVNDALFRLESRGAFRALKNLGLTDAYMQADGAPGGYT 205

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L               +   ++ SDH P+  
Sbjct: 206 FWDYQAGAWPRNLGIRIDHLLLSPQAADKLAGVVIH-------RDERDKEKPSDHVPVVA 258

Query: 301 DY 302
           + 
Sbjct: 259 EL 260


>gi|288920812|ref|ZP_06415110.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f]
 gi|288347771|gb|EFC82050.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f]
          Length = 296

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 74/303 (24%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   +  + L ++      D+V LQE        K+
Sbjct: 1   MRIATWNIN----------------SAKARQSRLIEWLDRASPDVVCLQE-------TKL 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +F        +      +     +A+  +      Q    L     F +   R
Sbjct: 38  ADDAFLELFDEDLFRRGYRVAHHGDGRWNGVAILSRAGLDDVQRG--LPGDPGFPKPEPR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                        I V  +++ +   +D     Y  +          L+D + +   +  
Sbjct: 96  AIAATC-----GGIRVWSLYVPNGRTVDDPHYAYKLA------WLAALRDVVGELAPAG- 143

Query: 204 PFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                              +     +              
Sbjct: 144 PVMTLGDFNIAPTDADVWDIAAFEGATHVTEAERAALGELHGAGLVDLMRARWPEETVYT 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + ID  +   +                 D    +G   SDH P+ +
Sbjct: 204 YWDYRQLCFPKNYGMRIDLALATADVAGRTRAVWV-------DRAARKGTGTSDHAPVVV 256

Query: 301 DYD 303
           D D
Sbjct: 257 DLD 259


>gi|152996388|ref|YP_001341223.1| exodeoxyribonuclease III [Marinomonas sp. MWYL1]
 gi|150837312|gb|ABR71288.1| exodeoxyribonuclease III [Marinomonas sp. MWYL1]
          Length = 289

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 82/312 (26%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    +    + L  D++ LQE+  ++     
Sbjct: 19  MKFVSFNINGL----------------RARPHQIEALVEKLAPDVIGLQEIKVHDDA--- 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     I +         H  +A+  K     Q++  +            R
Sbjct: 60  -------FPHEIPESIGYHAYYYGQKSHYGVAIFSK-----QEATKIEYGFPGDEEDAQR 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +    +     + VL+       F       +        +    L +++        
Sbjct: 108 RMIIATFDTPQGPVKVLN-----GYFPQGESRDHEIKFPAKRKFYADLMEYLAAH-SPDE 161

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N     L                         +++ T+        + +   
Sbjct: 162 KIIVMGDINISPTDLDIGIGEPNAKRWLKTGKCSFLPEEREWFATLANWGLTDTYRQLNP 221

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           ++ +       +             ID  +       +L          + D      ++
Sbjct: 222 TKNDRFSWFDYRSKGFEDTPKRGLRIDVIMASNGLMPYLENS-------DVDYDLRALEK 274

Query: 292 LSDHCPISIDYD 303
            SDH PI   ++
Sbjct: 275 PSDHAPIWTSFN 286


>gi|116669243|ref|YP_830176.1| 5'-nucleotidase domain-containing protein [Arthrobacter sp. FB24]
 gi|116609352|gb|ABK02076.1| 5'-Nucleotidase domain protein [Arthrobacter sp. FB24]
          Length = 1525

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 53/346 (15%), Positives = 103/346 (29%), Gaps = 64/346 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGV----------------SLWKNSVKRTTSDYT---- 55
             A+V   +++ S+N+       G                 ++      R  ++      
Sbjct: 505 APAAVGGTLKIASFNVLNYFPTTGDMLAGCTFYTDRDGNPITVRGGCDARGAANAENLKR 564

Query: 56  ---LLRQYAKNLDADIVFLQEMGS--------YNAVAKV---FPKNTWCIFYSTERLINH 101
               +        AD+V L E+ +         +A+AK+       T  I+       N 
Sbjct: 565 QQDKIVAAIGKSGADVVSLMEVENSAQFGKDRDDALAKLVEALNIPTPGIWDYVRTPANA 624

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NGKKI 157
                 + I TA   +K     + +S       D+ + A  R+ +  + +     + KK 
Sbjct: 625 PPLADEDMIRTAFIYKKAAAEPVGESVI---HNDTVAFASARKPLAQVFKPVGASDDKKF 681

Query: 158 WVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFN 212
             +  H KS     + E+T      S    ++QA+ L  +    Q  +      + GDFN
Sbjct: 682 IAIANHFKSKGSAATPEDTDKGQGASNLARTEQAKSLLAFSNDLQASKGTDKVFLMGDFN 741

Query: 213 RKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                   N       I+ ++             ++         +D+ +    A   + 
Sbjct: 742 AYAKEDPINVLTAAGYINQDEKARNADGSAK---HSYLFGGLVGSLDHVLATPGADSVVT 798

Query: 272 QESFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303
                 I   E       +              R SDH P+ +  D
Sbjct: 799 GADIWNINSVESVALEYSRYNSNVTNYYAPDQFRASDHDPVVVGLD 844


>gi|315606039|ref|ZP_07881070.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312321|gb|EFU60407.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 275

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 74/269 (27%), Gaps = 43/269 (15%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           +    D D++ +QE+ +   +++      W   +   R+   +           +AVR+ 
Sbjct: 24  WLHASDTDVLLVQEVRAPEEISREIMGEEWDSVWVPCRIKGRAG--------VGVAVRRG 75

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
             R+  +   +L   +S   +G      +  E  G  + V+  +  S       ++    
Sbjct: 76  RARIDGEPRLVLDDAESDVDSGRWLEATVSREGGGVPVRVVSAYFHSGEKDTPKQDAKMA 135

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------- 223
               +  +   L   I ++    V  ++ GDFN   +     +                 
Sbjct: 136 HLPRIGNRMAEL---IAEEANGGVSSLVCGDFNVVRSRCDIKNWTPNHNKRAGVLDEEIA 192

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQES 274
           F                             +           IDY               
Sbjct: 193 FLNRWVDEGWRDTVRDLAGDTQGPYSWWSWRGQAFVNNAGWRIDYQYATPRLGALARS-- 250

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ++         R SDH P+S+ YD
Sbjct: 251 -----FDIGRAPDYDARFSDHAPVSVTYD 274


>gi|294632194|ref|ZP_06710754.1| exodeoxyribonuclease III [Streptomyces sp. e14]
 gi|292835527|gb|EFF93876.1| exodeoxyribonuclease III [Streptomyces sp. e14]
          Length = 261

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 77/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ LQE          
Sbjct: 3   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEAKVAED---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +            +AV  +          L G          R
Sbjct: 43  ------QFPAEQLRELGYESAVHATGRWNGVAVLSRVGLADVVKG-LPGDPGYDGVQEPR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V      + V  +++ +   +D     Y        +  + LK  +        
Sbjct: 96  A-----VSATCGPVRVWSVYVPNGREVDHPHYAYK------LEWFEALKAAVAGDAAGSR 144

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N         D                   ++         P+      +  
Sbjct: 145 PFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAALASLREAGLADVVPRPLKYE-HPF 203

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    ++   K              D  + +GK  SDH P+ 
Sbjct: 204 TYWDYRQLCFPKNRGMRIDLVYGNEPFAKA-------VTDAYVDREERKGKGASDHAPVV 256

Query: 300 IDYD 303
           +D D
Sbjct: 257 VDLD 260


>gi|172061100|ref|YP_001808752.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6]
 gi|171993617|gb|ACB64536.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6]
          Length = 271

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 81/300 (27%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +  +   D++ LQE          
Sbjct: 14  MKIATWNVNSLN----------------VRKQHVLDWIAHSGTDVLCLQE---------- 47

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    I +    +    +  +A+  ++   + +S  +             
Sbjct: 48  LKLPDEKYPRADLEAIGYRSWFTGQRTYNGVAILARDTLAVDESDIVRNIPGFDDPQQRV 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV +        + ++  +  +    DS +  Y        Q    L  W++ + +   
Sbjct: 108 IAVTVE------GVRIVSAYFPNGQSPDSDKFVYK------MQWLDALHAWLSAEMQRYP 155

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 156 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDAFRRFEQPEKTFT 215

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D +    ++ SDH P+  
Sbjct: 216 WWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEV-------DRLPRTWEQPSDHTPVVA 268


>gi|84686218|ref|ZP_01014113.1| possible Endonuclease/Exonuclease/phosphatase fa [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84665745|gb|EAQ12220.1| possible Endonuclease/Exonuclease/phosphatase fa [Rhodobacterales
           bacterium HTCC2654]
          Length = 343

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 90/341 (26%), Gaps = 61/341 (17%)

Query: 24  VRLVSWNINTLSE--QEGVSLWKNSVKRTTSD------YTLLRQYAKNLDADIVFLQEMG 75
           VR+ ++N+        +   + ++S      D       T L      +DAD V + E  
Sbjct: 2   VRIATYNVEWFDGLFDDAGGMLEDSGWSGRHDVTRADQLTALGIVFTAMDADAVMIIEAP 61

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQ-------- 126
             N                  R         +      A+                    
Sbjct: 62  DDNRTRSTVRALETFAHAYGLRARKALLGFRNATQQEIALLYNPDVFEARHDPQGDETGK 121

Query: 127 ---------------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF-- 169
                             +    D    +     V L    NG+ + ++ +H KS     
Sbjct: 122 KGTRDAPRFDGVFRFDLDIDATPDLIRWSKPPLEVALTNRENGRVLRLIGVHAKSKAPHG 181

Query: 170 ---LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
               D +      +      Q  WL+  +    ++    ++ GDFN           F +
Sbjct: 182 ASAPDEVMRLAIENRRKQMAQCIWLRQRVNDHLDAGDSLIVMGDFNDGPGLDEYEKLFGR 241

Query: 227 -----TIDPNDSLIRFPKEKD-------------SRCNANKNLRNKIP-IDYFVMDQNAY 267
                 +        +                  +R   +   R     +DY ++  +  
Sbjct: 242 SGIEIVLGEAGQTELYDPHARLAVSRRVGAMPVTARFWIHSEKRYLQALLDYIMVSPDLL 301

Query: 268 ----KFLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDYD 303
                + I   F + + Y   +++      SDH P+SID D
Sbjct: 302 ASKPDWRIWHPFDDPVCYRTIELREALLTASDHFPVSIDID 342


>gi|330466241|ref|YP_004403984.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328809212|gb|AEB43384.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 650

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 94/293 (32%), Gaps = 56/293 (19%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +           ++RLV++NI      +G             D   L +      AD+V 
Sbjct: 405 WLTATNRPGPPTQIRLVAYNIRMGFGLDG-----------RLDLAALDRAIGR--ADVVL 451

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           L E+     +      +T  +  +   +       +      A+  R    +   ++ P 
Sbjct: 452 LSEVDRGWLLNG--GHDTLHLLATRLEMPYVFAPAAGALWGDAVLSRWPVRQAQTRALPA 509

Query: 131 LGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +GA           A+ + V+  +G ++ V+  HL+     D               QA+
Sbjct: 510 VGAPTGAQ------ALGVTVDFSDGVRLAVVSTHLQPPPGTDP------------VVQAR 551

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            + ++ T+  +   P V+AGDFN +       D  +  +     +  F   +    +   
Sbjct: 552 AVAEFATEYAD-GRPLVVAGDFNTEPG-----DPAFTALTDAGLVDAFAAVRPLPTSPA- 604

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               +  ID+  +  +                  D  +     SDH P+++  
Sbjct: 605 -DDPRTQIDHIFVSPDL--------------PTTDPVAIASTASDHLPVAVTL 642


>gi|332968196|gb|EGK07274.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. 1501(2011)]
          Length = 251

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 83/289 (28%), Gaps = 50/289 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + + ++NI+             S          +    K ++ DI+ LQE+   N +
Sbjct: 4   SNSITVTTYNIH----------KGMSPLNRHVVTQRMGLALKQINPDIMCLQEVQGQN-L 52

Query: 81  AKVFPKNTWCIFYSTERLI-------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            ++   N +      E          ++ K     + H   AV  ++        P    
Sbjct: 53  KRMLKYNEYPNQSQHEWFGEFLDCQHSYGKNSEYGNGHHGNAVLSRHPL-----DPKHNV 107

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             + ++   R  +   V   G +  V+ +        +              +Q + +  
Sbjct: 108 NITVNKLEQRGVLHCEVLPLGWEEPVVVLCAHLNLLEND-----------REKQYRAIAA 156

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           ++    +   P ++AGDFN             K  D  +    F +              
Sbjct: 157 YVNDTIDQNRPLILAGDFNDWKKVS-----CQKLADELNMTEAFMEMHHKLLPTYPAKLP 211

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +D   +       L  +                  LSDH PIS + 
Sbjct: 212 VLSLDRIYVRN-----LKIKRAWVH------KGKPWSSLSDHLPISAEL 249


>gi|170733499|ref|YP_001765446.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3]
 gi|169816741|gb|ACA91324.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3]
          Length = 258

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 80/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  ++  V+ +S  +      F     R
Sbjct: 35  LKLPDEKFPRADLEAAGYRSWFTGQKTYNGVAILVRDTLVVDESDVVRNIP-GFDDPQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + ++  +  +   LDS +  Y        Q    L+ W+  + +   
Sbjct: 94  VIAATV-----DGVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLRTELQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D      ++ SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSPALAATCASCEV-------DRTPRTWEQPSDHTPVVA 255


>gi|331006597|ref|ZP_08329884.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989]
 gi|330419581|gb|EGG93960.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989]
          Length = 272

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 81/312 (25%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+N+N                        L    +  D D + LQE    +     
Sbjct: 2   IKAISFNVN----------------SIRQRIPQLEALIEKHDPDFIGLQETKVTDV---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +  +      H  +A+  K+  +  Q        ++      R
Sbjct: 42  ------DFPVDVIEKMGYHVQFHGQKTHYGVALMSKHPFLSVQKGYDTDDDEAQK----R 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V   G +I V++       F       +    +   +  + L  ++ +      
Sbjct: 92  FISGRFVSPLGGEITVVN-----GYFPQGESQDHPTKFANKKKYYEDLDSYLCRNHTPED 146

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++L    ++   +        +     
Sbjct: 147 QLIVMGDMNISPEDQDIGIGEDNRKRWLKTGKCSFLPIEREWLAKLYNWGLTDTYRLLHP 206

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +  +       +             ID  +  ++  K + +          D      ++
Sbjct: 207 TGSDYFSWFDYRSRGFEREPKRGLRIDLILATESLAKTVTESGI-------DYEIRGMEK 259

Query: 292 LSDHCPISIDYD 303
            SDHCPI   +D
Sbjct: 260 PSDHCPIWTYFD 271


>gi|89069305|ref|ZP_01156668.1| probable exonuclease [Oceanicola granulosus HTCC2516]
 gi|89045181|gb|EAR51249.1| probable exonuclease [Oceanicola granulosus HTCC2516]
          Length = 255

 Score = 92.3 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 80/302 (26%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                        L  +      D++ LQE+ + +A    
Sbjct: 1   MKVATYNINN----------------VRKRLGNLLDWLAGAAPDVLCLQELKTADA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  +      +            +A+  +    +     L    D       R
Sbjct: 41  ------DLPRAALAEAGYQGVWRGQRAWNGVAILSRGGAPVLVRDSLPDDPD------PR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           +A  L   + G  + +  ++  +       +  Y  +          L         + V
Sbjct: 89  QARYLEAAVEG--VLIGCLYAPNGNPCPGPKYDYKRA------WTDRLVAHAADLLAAGV 140

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N         D                 ++++            +       
Sbjct: 141 PAVLAGDYNIVPEPRDIYDTTSYDGSSLVQPEMRARYRSLLDAGWTDAVRALRPEGTAYT 200

Query: 249 KNLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+ ++   A + L+           D      +  SDH P+ +
Sbjct: 201 FWDYRRRRFERDGGLRLDHLLLSPPAAERLVAIGI-------DREARAREEASDHAPVWV 253

Query: 301 DY 302
           + 
Sbjct: 254 EL 255


>gi|269796627|ref|YP_003316082.1| extracellular nuclease [Sanguibacter keddieii DSM 10542]
 gi|269098812|gb|ACZ23248.1| predicted extracellular nuclease [Sanguibacter keddieii DSM 10542]
          Length = 1591

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 54/362 (14%), Positives = 102/362 (28%), Gaps = 80/362 (22%)

Query: 13  LVPCTASVAQ-KVRLVSWNINTLSEQEGV------------------SLWKNSVKRTTSD 53
             P TA++    V + ++N+       G                   +    +  R   D
Sbjct: 453 AAPDTAAIGDADVTVAAFNVLNYFTTTGSTVTGCSSYTDRTGAGITTNTCPGNGPRGAWD 512

Query: 54  YT-------LLRQYAKNLDADIVFLQEMGSYNAVAKV---------------FPKNTWCI 91
                     +      LDAD+V L E+ +  A+ +                  ++ W  
Sbjct: 513 ADNLERQQDKIVDAITRLDADVVGLMEIENSAALGEAPDEAVGTLVAALNAEAGEDRWAF 572

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLGAKDSFSRAGNRRAVEL 148
             S   L   + +D  +    AI  +   V  + +S+    L GA  +F  A        
Sbjct: 573 VESPADLPAVADQDVISG---AIIYQTAAVTPVGESHALGTLSGAGQTFVNAREPIGQAF 629

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESL-- 202
                GK  +V+  H KS     +             +  + QA  L  W+ +       
Sbjct: 630 EPADGGKPFFVVANHFKSKSAGGASGAERDLGQGAWNAARTAQATALATWVDETALPAVS 689

Query: 203 -------VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                     ++ GDFN   +       +                +              
Sbjct: 690 AEAGVPVEDVLLLGDFNAYTHEDPLLHLY------GAGYQDATTLEGRGELTYSYQGLNG 743

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNE--------------DDIKSRGKRLSDHCPISID 301
            +D+ +++++A +        EI   E              D  ++   R SDH P+ + 
Sbjct: 744 SLDHVLLNESAAERFTGSDVWEINAPESIALEYSRFNVTAGDFYRADAFRSSDHDPVVVG 803

Query: 302 YD 303
             
Sbjct: 804 LT 805


>gi|115463669|ref|NP_001055434.1| Os05g0389500 [Oryza sativa Japonica Group]
 gi|48926650|gb|AAT47439.1| 'unknown protein, contains endonuclease/exonuclease/phosphatase
           family, PF03372' [Oryza sativa Japonica Group]
 gi|113578985|dbj|BAF17348.1| Os05g0389500 [Oryza sativa Japonica Group]
 gi|215686379|dbj|BAG87640.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704387|dbj|BAG93821.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740790|dbj|BAG96946.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222631460|gb|EEE63592.1| hypothetical protein OsJ_18409 [Oryza sativa Japonica Group]
          Length = 389

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 78/326 (23%), Gaps = 40/326 (12%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +   + RLVS+NI      +        ++  +  +    +    K+ +AD++ +QE+
Sbjct: 57  AGAAGYQFRLVSYNILAQVYVKSAFFPHSPSACLKWKTRSKAVLSELKSFEADLMCIQEL 116

Query: 75  GSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN------------- 120
             Y+    K    + +   Y                  +   V+K+              
Sbjct: 117 DEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSMELVQKEVLHYNDLVEKYVHT 176

Query: 121 ------------VRVLQQSYPLLGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIH 163
                                        +    R       +    ++N     +L + 
Sbjct: 177 DHVNSDTSNNSSPTEEASKKVDNNKHGDPNDPRFRLKRDCVGLLAAFKLNDPCDHILIMA 236

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
                +     +        +  +    +  I+ K       +IAGDFN        N  
Sbjct: 237 NTHIYWDPEWIDVKLAQAKYILSRVTQFEKLISNKFNCKPSVMIAGDFNSTPGDKVYNYL 296

Query: 224 FWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFS 276
                D  D         +          N        +DY  +   +            
Sbjct: 297 VSANSDSTDEAPIKLRSLYAANGGEPEFTNCTPGFTGTLDYIFLSDGSSVKPTSLLRIPR 356

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
                           SDH PI  D+
Sbjct: 357 GDSAEVQGGLPNFHHPSDHLPIGADF 382


>gi|84501585|ref|ZP_00999757.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola
           batsensis HTCC2597]
 gi|84390206|gb|EAQ02765.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola
           batsensis HTCC2597]
          Length = 336

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 88/335 (26%), Gaps = 55/335 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--------LLRQYAKNLDADIVFLQEMG 75
           +RL S+NI                 R ++            +    + +DAD V L E  
Sbjct: 1   MRLASYNIEWFDALFDDDGALLIDDRWSARRDVTRAEQARAIATVLRAVDADAVMLIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             +                  R         N        +                   
Sbjct: 61  DTSGRRSTVRALETFAASFDLRTRRAVIGFPNRTQQEIALLFDPETMAAHHDPGGRPDDA 120

Query: 136 SFSRAGNRRAVELLVE-------------------INGKKIWVLDIHLKSFCFLDSLENT 176
              R   R  ++L V+                     G  + +L +HLKS     +    
Sbjct: 121 EAPRFDGRFRIDLDVDASRDTVVFSKPPLELMVTLPGGAALRLLGVHLKSKAPHGARTRD 180

Query: 177 YS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------ 225
                   +      QA WL+  +     +  P ++ GD N         + F       
Sbjct: 181 EIMRLAIANRRKQLAQAIWLRRRVAGHLAAGEPLIVMGDLNDGPGLDEYENLFGRSSVEI 240

Query: 226 -------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYK----F 269
                  +  DP+       +   +   A  +++         +DY ++  +       +
Sbjct: 241 VLGDEAPRLYDPHVDQALAARLTAAPTTARFHIQPDDRYLQALLDYIMISPDLMSHNPRW 300

Query: 270 LIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYD 303
            I   F +   ++   ++      SDH P+ +D D
Sbjct: 301 RIWHPFDDPGCWSRPQLRDALITASDHFPVVLDID 335


>gi|293376548|ref|ZP_06622776.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
 gi|325839350|ref|ZP_08166789.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
 gi|292644774|gb|EFF62856.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
 gi|325490470|gb|EGC92786.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
          Length = 260

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 88/287 (30%), Gaps = 44/287 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+ + S  +G         R      ++    K  + DI+ LQE+ +       
Sbjct: 1   MKVMTFNLRSDSIFDG-------KNRWHKRNHIVFDVIKKYNCDIIGLQEVTNKMYKDIE 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD-----SFS 138
              + + I                   H  I + K++  + ++++ L           + 
Sbjct: 54  EQLSDYYIIGQPRCKR-------FFVEHNNILISKRHEILEEETFWLSNQPKKVGSSIWY 106

Query: 139 RAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
               R      V ++ G+ + + + HL  +            S  +  QQ          
Sbjct: 107 SVFPRICTTAKVRLDSGELVRIYNTHLDVYLSPARGYGLKKISEYIERQQ---------- 156

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----DSRCNANKNLRN 253
            +   +P V+ GDFN   N+          +     +     +K           K+   
Sbjct: 157 -EIDQIPVVLMGDFNATPNHRIIKTFTEGELSHKRFVAVQEYDKSIYNKPTMGRFKDSEK 215

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            + +DY  + +             +          G+  SDH P+  
Sbjct: 216 GMHLDYIFVSEECA---------VLHAEIIKDNVNGQYPSDHYPLLA 253


>gi|302555181|ref|ZP_07307523.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736]
 gi|302472799|gb|EFL35892.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736]
          Length = 259

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 78/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ LQE        + 
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEA---KVAEEQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +            +AV  +          L G          R
Sbjct: 42  FPSEQLREL-------GYESAVHATGRWNGVAVLSRVGIEDVVKG-LPGDPGFDGSVEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +D     Y        Q  + LK  +        
Sbjct: 94  A-----ISATCGPLRVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGSR 142

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N         D                   ++         P+      +  
Sbjct: 143 PFAVMGDYNVAPTDDDVFDPAAFADSTHVTPAERAALASLREAGLSDVVPRPLKYE-HPF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    ++   K              D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYANEPFTKA-------VEDAYVDREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|237721042|ref|ZP_04551523.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293372989|ref|ZP_06619358.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|229449877|gb|EEO55668.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292632057|gb|EFF50666.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 365

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 88/299 (29%), Gaps = 68/299 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++N++  + +                   +  Y +NL ADI+  QE      +   
Sbjct: 110 LTVATYNVDAFNHEHTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F  ++     S      +            +AV  +     +       +K+        
Sbjct: 155 FGIDSIYAALSNWPYH-YIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCS------ 207

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------PSC 181
             +   +EING+ I + + HL++     +                             + 
Sbjct: 208 --LACDIEINGRTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQRVEHAALGLIDGLHENF 265

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
              + QA  LK  I     S  P ++ GDFN   +    +     TI  +     F +  
Sbjct: 266 RKRAVQADLLKQLI---AASPYPTLVCGDFNSLPSSYVYH-----TIKGDKLQDGFQRSG 317

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                  K  ++ + IDY +                   N  D  S     SDH P+ +
Sbjct: 318 HGYMYTFKYFKHLLRIDYILHSPEL--------------NSTDYFSPDLNYSDHNPVVM 362


>gi|117618538|ref|YP_855175.1| endonuclease/exonuclease/phosphatase family protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117559945|gb|ABK36893.1| endonuclease/exonuclease/phosphatase family [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 371

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 89/300 (29%), Gaps = 42/300 (14%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
             +   ++++ S+N+  L                     LL +Y K  DA  + LQE+  
Sbjct: 100 PEADEARLKVASYNVWAL---------PVIAASIGERLALLPEYLKGYDA--LLLQEVFD 148

Query: 77  ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                 +  +  +  +      +         + +D    I  R   VR  Q  YP    
Sbjct: 149 GRREGFLQALAKEYPYQTRVLDKP------GVNIHDGGVVIVSRYPIVREAQLVYPQCTG 202

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            D F+       +   V   GK   +   H  SF   ++          +   Q + L  
Sbjct: 203 TDCFADK---GVMYAEVIKGGKAWHLFATHTASFDTDEA-----RRLRQIQFGQIRTLAA 254

Query: 194 WITQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
            +     +    +  GDFN     +  +       ++ ++    +    ++  +   N  
Sbjct: 255 SLK--IPASDTVIYGGDFNVNKRKFADDYAGMLANLNADEP--GYGGYTEATFDPRINPY 310

Query: 253 ---------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    N   +DY V  +         +   I  + D        LSDH P+  +  
Sbjct: 311 AGGPLSGGANVEYLDYLVASREYGAVCHNLNSVWIPRSSDGSLWPASNLSDHFPVKGEIS 370


>gi|94969020|ref|YP_591068.1| exodeoxyribonuclease III (xth) [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551070|gb|ABF40994.1| exodeoxyribonuclease III (xth) [Candidatus Koribacter versatilis
           Ellin345]
          Length = 260

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 88/301 (29%), Gaps = 74/301 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWN+N                   +   ++  +      D++ +QE+ +    A+ F 
Sbjct: 9   IASWNVN----------------SIRARLGIVSDWIAKNHPDVLLMQELKATEFPAEAFH 52

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
              +     T+              +  +AV  +      ++       DS +R      
Sbjct: 53  ALGYQAAAVTQ------------KAYNGVAVLSRLPVETVRTALRGDEADSHARY----- 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               +E     + V++I+  +   + + + +Y  +          L   +    +  +P 
Sbjct: 96  ----LETRIDGLRVVNIYAPNGNPIGTEKFSYKLA------WLDRLIQEMQSWLKDDIPT 145

Query: 206 VIAGDFNRKIN-------YLGNNDDFW--------KTIDPNDSLIRFPKEKDSRCNANKN 250
           V+AGD+N                D  +        + +        F             
Sbjct: 146 VVAGDYNIIPEDIDCHKPSSWIRDALFQPEPRERYRALLAMGYTDAFRTLHPGETGQFTF 205

Query: 251 LRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                        I ID+F++  +    L +          D    + ++ SDH PI ++
Sbjct: 206 WDYFRKAFETNRGIRIDHFLLSPSLKPRLAKCHI-------DTEPRKLEKPSDHTPIVLE 258

Query: 302 Y 302
            
Sbjct: 259 L 259


>gi|54027277|ref|YP_121519.1| putative exonuclease [Nocardia farcinica IFM 10152]
 gi|54018785|dbj|BAD60155.1| putative exonuclease [Nocardia farcinica IFM 10152]
          Length = 303

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/310 (10%), Positives = 75/310 (24%), Gaps = 68/310 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +RL +WN+N                   S    +  +    D D++ +QE    +    
Sbjct: 6   SLRLATWNVN----------------SIRSRLDRVTTWLDEHDIDVLAMQETKCRDD--- 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAG 141
                     +     + +       +    +A+  +         +P     D  +   
Sbjct: 47  -------QFPFERFAELGYEVAHLGVNQWNGVAIASRVGLADIAPAFPGQPGFDKDAADS 99

Query: 142 NRRAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              A  +    +      + V  +++ +   LD     Y        +    L+      
Sbjct: 100 LISAPVVESRALAATCGGVRVWSLYVPNGRALDDPHYAYK------LEWLAALRASAADW 153

Query: 199 --KESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEK 241
              +      + GD+N                         D +  I             
Sbjct: 154 LAADPAAKIALVGDWNIAPTDDDVWSVEFFAGKTHTSQPERDAFAAILDTGFADVMRPFA 213

Query: 242 DSRCNANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                       +        + ID+ +        ++           D    +GK  S
Sbjct: 214 PGPGVYTYWDYTRLRFPRKEGMRIDFVLASPALAATVVDAGV-------DREARKGKGAS 266

Query: 294 DHCPISIDYD 303
           DH P+  ++D
Sbjct: 267 DHAPVIAEFD 276


>gi|88813684|ref|ZP_01128912.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231]
 gi|88789071|gb|EAR20210.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231]
          Length = 256

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L SWN+N+L                      + ++ K    D++ LQE    +     
Sbjct: 1   MKLASWNVNSL----------------KVRLPQVLEWLKTAQPDLLGLQETKVPDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +    S    +  +AV  +           +  +        R
Sbjct: 41  ------HFPSEALRAAGYEVVYSGQKTYNGVAVLSRWSITE------MLTELPTLADPQR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + +        +  +++++ +   + S +  Y             L+ W+ ++ E   
Sbjct: 89  RVLAVTA----AGLRFINLYVPNGQAVGSDKYAYKLD------WLAHLRGWLAEELERWP 138

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GDFN        +D                  + +        F +         
Sbjct: 139 RSIVVGDFNIAPQDQDVHDPQQWHEQVLCSTPEREALQALLALGFADSFRQFPQEP-GIF 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID  +      + L            D       R SDH P+ 
Sbjct: 198 SWWDYRMNSFRRNRGLRIDLILSSAALTRTLTASYV-------DRGPRGWPRPSDHAPVV 250

Query: 300 IDYDF 304
            +  F
Sbjct: 251 AELHF 255


>gi|295691547|ref|YP_003595240.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756]
 gi|295433450|gb|ADG12622.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756]
          Length = 268

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 78/305 (25%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                          ++      D++ +QE+         
Sbjct: 3   LRIATWNVN----------------SVRLRAEQAARFVDEHAPDVLCMQEIKCQ------ 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      + E +     + +       +A+  +       +                
Sbjct: 41  ---DGEFPREAFEAMGLPHLKIAGQKGWHGVAIASRLPIEDVPTLMNCREGH-------- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  + V++ G +I     +       D  +   +P         + L   + ++ +   
Sbjct: 90  -ARCVAVKVAGVEIQ----NFYIPAGGDLPDRAANPKFDHKLDFYETLTAALKKR-DPKD 143

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                   +     + F   I   D L             
Sbjct: 144 PLIVTGDLNIAPGENDVWSHRQMLKVVSHTPPELEAFDALIKSMDLLDLPRLATPEPDKL 203

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+ +         I +   ++     D     +R SDH P
Sbjct: 204 FSWWSYRAADFRKSNRGLRLDHILASPGLRDAAIVDG--QVASRVHDDVREWERPSDHAP 261

Query: 298 ISIDY 302
           ++ D 
Sbjct: 262 VTADL 266


>gi|298374557|ref|ZP_06984515.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298268925|gb|EFI10580.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 365

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 95/334 (28%), Gaps = 78/334 (23%)

Query: 4   KYVLALVFFLVPCTASV--------------AQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           K++L  +F  + C   V               + ++++++N+     +    +  N    
Sbjct: 68  KFLLIGIFSFLLCWGPVKRYFPFHSHKDVPREEVLKVLTYNVMAFGYKNHTKIAPN---- 123

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  + QY  N DADIV LQE  +  +   +     +    S     +   + S   
Sbjct: 124 ------KIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDA-LSMYPYRSVFYQSSTKF 176

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               IAV  K      +        +         +    V I GKK+ +++ HL+SF  
Sbjct: 177 QSFGIAVFSKYPLSNSRMVKYDSDYN--------GSSVHEVNIKGKKLTLINNHLESFKL 228

Query: 170 LDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFV 206
                  YS                       P+  + ++QA+ + + I          +
Sbjct: 229 TMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKN--AKGDYVL 286

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GDFN       +           D    F +                 ID  +   N 
Sbjct: 287 VCGDFNDTPISYAHRTI------QGDLTDAFAESGRGMGITYNQNFFWFRIDNILHSPNM 340

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                            +        SDH P+  
Sbjct: 341 TSM--------------NCSVDKVAYSDHYPLWC 360


>gi|302884128|ref|XP_003040961.1| hypothetical protein NECHADRAFT_54591 [Nectria haematococca mpVI
           77-13-4]
 gi|256721855|gb|EEU35248.1| hypothetical protein NECHADRAFT_54591 [Nectria haematococca mpVI
           77-13-4]
          Length = 303

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 74/284 (26%), Gaps = 17/284 (5%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN-SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +RL+++NI    E       +     R       L          +V +QE+    A+  
Sbjct: 25  LRLMTYNIRYQVEPSRAEDGEELWPLRRPHMAAQLNYELAGRPDSLVCMQEVTYPQALDL 84

Query: 83  VFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      W +     R        S      +I   ++         P       +    
Sbjct: 85  MDDFGEDWALIGGGRRDGAKKGELSPIFYRRSIWNLEQTKTYWLSRTPDKAGSKGWDAEL 144

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R               V+ +                 S    +     L D  +  K  
Sbjct: 145 PRVVTVGRFRHLHTGARVVYMCTHFDW-------KGKKSQGHSAAMIIDLADRWSSHKRE 197

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN--LRNKIPIDY 259
            +P  +AGD N   +    N    +  D    +    +    +     +    + + +D+
Sbjct: 198 SLPVFVAGDLNATPDSPAYNLLATQLYDLKYQVPSSKRFGHQKTYTGFSVDESDDMDLDH 257

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +           +     Y        G  +SDH P+ +D +
Sbjct: 258 MFVRDPMDISFKSFAVLNTRY------DDGIFISDHRPVVVDME 295


>gi|171318534|ref|ZP_02907685.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5]
 gi|171096276|gb|EDT41183.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5]
          Length = 271

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 81/300 (27%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +  +   D++ LQE          
Sbjct: 14  MKIATWNVNSLN----------------VRKQHVLDWIAHSGTDVLCLQE---------- 47

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    I +    +    +  +A+  ++   + +S  +             
Sbjct: 48  LKLPDEKYPRADLEAIGYRSWFTGQRTYNGVAILVRDTLAVDESDVVRNIPGFDDPQQRV 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV +        + ++  +  +    DS +  Y        Q    L  W++ + +   
Sbjct: 108 VAVTVE------GVRIVSAYFPNGQSPDSDKFVYK------MQWLDALHAWLSAEMQRYP 155

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 156 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDAFRRFEQPEKTFT 215

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D +    ++ SDH P+  
Sbjct: 216 WWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEV-------DRLPRTWEQPSDHTPVVA 268


>gi|302557371|ref|ZP_07309713.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000]
 gi|302474989|gb|EFL38082.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000]
          Length = 259

 Score = 91.9 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 76/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ LQE          
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEAKVAED---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +            +AV  +          L G          R
Sbjct: 41  ------QFPAEQLRELGYESAVHATGRWNGVAVLSRVGLADVVKG-LPGDPGYDGSVEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                        + V  +++ +   ++     Y        Q  + L   ++       
Sbjct: 94  AIAATC-----GPVRVWSVYVPNGREVEHPHYAYK------LQWFEALTAAVSGDAAGGR 142

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N         D                   ++         P+      +  
Sbjct: 143 PFAVLGDYNVAPTDDDVYDRSAFEGSTHVTPAERAALASLREAGLSDVVPRPLKYE-HPY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +    K +            D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNAPFAKAVTDSYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|284034607|ref|YP_003384538.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813900|gb|ADB35739.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 266

 Score = 91.9 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 77/296 (26%), Gaps = 53/296 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAV 80
           +R+++WN+                         +    +  DAD++ LQE+    + N  
Sbjct: 1   MRVLTWNVWWRFGP------------WQRRADAILTVLREADADLIGLQEVWAQGNDNQA 48

Query: 81  AKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           A++  +      +          +R  +  +    A+  +     +    L G       
Sbjct: 49  AQLASELGLHWTFEPLANPEPWQRRLGDRSVAIGNAILSRRPIDDRAVLELPGP------ 102

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R A+       G   +   +                 + ++  +Q + L  ++ +  
Sbjct: 103 -EQRSALFA--STGGVPFFTTHLEAP------------ITASAIRCEQVRALAGFVAEHS 147

Query: 200 ESLVPFVIAGDFNRKINYLGNN-------DDFWKTIDPNDSLIRFPKEKDSRCNAN---- 248
            +  P VI GDFN   +                  +   D+       + +         
Sbjct: 148 RAAHPPVITGDFNALPDSDELRLFSGVRTAPAVPGLVLIDAWEYAEPGQPAATWDTANPH 207

Query: 249 --KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     +DY  +                +         G   SDH  +  + 
Sbjct: 208 VAATFTPSARVDYIHVG---VPGRNGAGHVTAVRRTGAAPVDGVWPSDHAAVVAEL 260


>gi|307294159|ref|ZP_07574003.1| Endonuclease/exonuclease/phosphatase [Sphingobium chlorophenolicum
           L-1]
 gi|306880310|gb|EFN11527.1| Endonuclease/exonuclease/phosphatase [Sphingobium chlorophenolicum
           L-1]
          Length = 244

 Score = 91.9 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 76/286 (26%), Gaps = 57/286 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77
              + VR+ S+NI      +   +              +      LDADI+ LQE     
Sbjct: 11  FAMRTVRVASYNIRKAIGTDRRRVP-----------ERVIDVLNELDADIIALQEADRRF 59

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              +   P          + +  +   DS      AI VRK           L       
Sbjct: 60  GVRSAALPPWLLESISPYKPVPLNVHVDSMGWHGNAILVRKDVEVGAHDVLHLP------ 113

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A    V ++   + V  +HL               S     +QA  +      
Sbjct: 114 -CLEPRGATMAEVTLDKGSLRVFGMHLDL-------------SGLWRRKQAAAV--IHAA 157

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNKIP 256
                +P V+ GD N                +             + C  +    R    
Sbjct: 158 SSRDAMPTVLMGDLNEWSA------------ERGCLADFARHYSFAPCGRSFHARRPVAR 205

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D  +        L+     E         +  +R SDH PI  ++
Sbjct: 206 LDRIMHCGQL--KLVDCGVHE--------SAAARRASDHLPIWAEF 241


>gi|90419377|ref|ZP_01227287.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
 gi|90336314|gb|EAS50055.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
          Length = 260

 Score = 91.9 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 82/300 (27%), Gaps = 67/300 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WNIN                   +    L  + +    DI  LQE+ + +       
Sbjct: 3   IATWNING----------------VKARLDALLAWLQERSPDIACLQEIKNVDE------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                        + +            +A+  K   V  +      + D  +R      
Sbjct: 41  ----TFPREAIEALGYHVETHGQKGFNGVALLSKEKPVSIEPRLPGDSSDEHARF----- 91

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +E + + +G+ + V  ++L +   L + + TY  +        Q L              
Sbjct: 92  IEGVWDFHGRPLRVASLYLPNGNPLGTEKFTYKLA------WMQRLLAHARDSMAREELL 145

Query: 206 VIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANKNL 251
           V+AGD+N      +    +      +             N  L    +            
Sbjct: 146 VLAGDYNIIPERGDAARPDKWTGDALFQPESRAAYRRLINLGLSDAIRATTDADGTYSFW 205

Query: 252 RNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+ ++   A   +            D      ++ SDH P+ ++ 
Sbjct: 206 DYQAGAWQKNNGIRIDHLLLSPEAQDRMASAGI-------DRHVRGWEKPSDHVPVLVEL 258


>gi|298481016|ref|ZP_06999211.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           D22]
 gi|298273039|gb|EFI14605.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           D22]
          Length = 365

 Score = 91.9 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 88/299 (29%), Gaps = 68/299 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++N++  + +                   +  Y +NL ADI+  QE      +   
Sbjct: 110 LTVATYNVDAFNHEHTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F  ++     S      +            +AV  +     +       +K+        
Sbjct: 155 FGIDSISAALSNWPYH-YIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCS------ 207

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------PSC 181
             +   +EING+ I + + HL++     +                             + 
Sbjct: 208 --LACDIEINGRTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQRVEHAALGLIDGLHENF 265

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
              + QA  LK  I     S  P ++ GDFN   +    +     TI  +     F +  
Sbjct: 266 QKRAVQADLLKQLI---AASPYPTLVCGDFNSLPSSYVYH-----TIKGDKLQDGFQRSG 317

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                  K  ++ + IDY +                   N  D  S     SDH P+ +
Sbjct: 318 HGYMYTFKYFKHLLRIDYILHSPEL--------------NSTDYFSPDLNYSDHNPVVM 362


>gi|217979561|ref|YP_002363708.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2]
 gi|217504937|gb|ACK52346.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2]
          Length = 303

 Score = 91.9 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                   ++L ++ K    D+V LQE          
Sbjct: 1   MKIATFNVNGING----------------RLSVLLRWLKETRPDVVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+   + + ++    L G  D        
Sbjct: 35  LKAPDERFPIRELENAGYGAIWHGQKSWNGVAILSASGKPIETRRGLPGDPDDSQSRYLE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+          I V  ++L +       +  Y        Q  Q L D+  +     V
Sbjct: 95  AAI--------DGIVVACLYLPNGNPAPGRKFDYK------LQWLQRLTDYAAELLALKV 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N     L                   + ++ +                    
Sbjct: 141 PVILAGDYNIIPTELDVYKPERWVDDALFRLEVREAFQILVSQGWTDALRTLHPGERVYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+ +++    K LI         + D      ++ SDH P+ I
Sbjct: 201 FWDYFRNAWDRNAGLRLDHLLLNPPVTKRLIAA-------DVDRAVRGWEKASDHAPVWI 253

Query: 301 DYD 303
           +  
Sbjct: 254 ELS 256


>gi|300311792|ref|YP_003775884.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1]
 gi|300074577|gb|ADJ63976.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1]
          Length = 260

 Score = 91.9 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 75/296 (25%), Gaps = 62/296 (20%)

Query: 12  FLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            ++   A V       + + ++NI+     +G                 +      L AD
Sbjct: 20  LVLSADAPVPGRDPWPLTVATYNIHGAVGTDGRFAP-----------ERVAAVLDELQAD 68

Query: 68  IVFLQEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           +V LQE+    A    V                               AV  +   +  +
Sbjct: 69  VVALQEVPLGGADQVDVLALLRAHTGMFAAEGPTMESPA----RRYGNAVLSRYPILATE 124

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           S  L     SF     R A++  ++  G+ + V+  HL                 +    
Sbjct: 125 SIDL-----SFGSREPRGALDADIDCRGQLLRVVATHLGLKP-------------AERRA 166

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           Q + L   +     +  P ++ GD N    +                +  F         
Sbjct: 167 QIKRL---LQAFDTNDAPVILLGDVNEWFMWGRTLRWL---------VGHFEAAPAPPTF 214

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++       +D   +        +               +  +  SDH P+    
Sbjct: 215 PSRWPVF--ALDRIWISPRRRLQHLAV----------HRSALARVASDHLPLLAHI 258


>gi|221198686|ref|ZP_03571731.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
 gi|221204948|ref|ZP_03577964.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221174739|gb|EEE07170.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221181137|gb|EEE13539.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
          Length = 280

 Score = 91.9 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 79/281 (28%), Gaps = 58/281 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +R+ ++NI+                        +      LDAD++ LQE+     +
Sbjct: 26  GRDLRIATYNIHG-----------GYGPWHARAADRIAAVIDELDADVIALQEVP----L 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                 +          +   +    +        AV  +      ++  L     SF +
Sbjct: 71  GGTRGPDVLAHLRDATGMHAAAGPTIDTAERRYGNAVLSRYPIRAARTLDL-----SFHQ 125

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R A++  ++     + V+  HL               S    S Q Q L   +    
Sbjct: 126 REPRGALDADIDCRTGPLRVVATHLGL-------------SARERSAQVQRL---LAAFD 169

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
              +P ++ GD N         + F +       + RF +    R            +D 
Sbjct: 170 TGAMPVILLGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTVCPLFS--LDR 218

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +               ++       +R +  SDH P+  
Sbjct: 219 IWVHPG----------ELLVDVAVHRSARARHASDHYPLVA 249


>gi|212691650|ref|ZP_03299778.1| hypothetical protein BACDOR_01145 [Bacteroides dorei DSM 17855]
 gi|237711947|ref|ZP_04542428.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237725796|ref|ZP_04556277.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|212665839|gb|EEB26411.1| hypothetical protein BACDOR_01145 [Bacteroides dorei DSM 17855]
 gi|229435604|gb|EEO45681.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229454642|gb|EEO60363.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 281

 Score = 91.9 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 70/296 (23%), Gaps = 38/296 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           C       VR  ++N+   + Q+ ++ W             + Q+ K+ + DIV +QE+ 
Sbjct: 17  CAEEKKTDVRWATFNVRYDNPQDSLNNW-------QYRKDRVCQFIKDRELDIVGMQEVL 69

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                        +            +   +             +        P      
Sbjct: 70  HNQFQDLRAGLPEYDGIGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMM 129

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            +     R A     +        + ++     F    E     S  L+ ++ + +    
Sbjct: 130 GWDAVCVRIATWAKFKDKATGKIFMAVNTH---FDHVGEEARRQSALLIIRKIKEIV--- 183

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253
                   P V+ GDFN                   D+     +                
Sbjct: 184 -----GERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVD---YTFHDFAR 235

Query: 254 -----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   ID+  +         +                   LSDH P   D +F
Sbjct: 236 IPAEDCEKIDFIFVTPQVLVKNCEIPAEV----------PEALLSDHNPQLADLEF 281


>gi|163752163|ref|ZP_02159367.1| extracellular nuclease, putative [Shewanella benthica KT99]
 gi|161327940|gb|EDP99116.1| extracellular nuclease, putative [Shewanella benthica KT99]
          Length = 559

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 90/327 (27%), Gaps = 50/327 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDADIVFLQ 72
           +    + L S+N+      +G      + +              +      ++AD++ L 
Sbjct: 70  AEGSNLILASFNVLNYFNGDGAGAGFPTPRGADTAAEFTRQRDKIIAAMVAINADVLGLM 129

Query: 73  EMGS-----YNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQ 125
           E+ +      +A+A +       I  +    ++   +     + I   +  R   V +  
Sbjct: 130 EIENDGFGSESAIADLVSGLNQAIGETRYAYVSAETAGGIGTDAITVGMIYRLDKVSLDG 189

Query: 126 QSYPLLGAKDS--------FSRAGNRRAVE--LLVEINGKKIWVLDIHLKSFCFL----- 170
            +  L  A           F+   NR  +        + + I V   H KS         
Sbjct: 190 AAKVLSSANSPLDENNNPLFNDGKNRPMLTQGFRHLDSDEVIVVAVNHFKSKSSDCDSLG 249

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
           D   N    +C+L   +A          +      ++ GD N               +  
Sbjct: 250 DPNMNDGQGNCNLTRTRAAEAVSLWLAAEYGEADVLVMGDLNAYAEENP-----LTALKN 304

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289
                 F         +         +D+ + + N    +I  +   I  +E  +     
Sbjct: 305 AGFTELFDHLDKENAYSYVYSGESGQLDHALANANLLDKIIDVTEWHINTDEPRLLDYNQ 364

Query: 290 ----------------KRLSDHCPISI 300
                            R SDH P+ I
Sbjct: 365 EFKSDAQLTDLYNADAYRSSDHDPVVI 391


>gi|297562942|ref|YP_003681916.1| endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847390|gb|ADH69410.1| Endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 810

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/329 (11%), Positives = 88/329 (26%), Gaps = 72/329 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            +V + ++N+  L  ++             + Y  L           DI+ L+E+     
Sbjct: 495 HEVSVATYNVENLGGRDD-----------QARYDALAAGIVESLNSPDIIGLEEIQDNTG 543

Query: 80  ------------VAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                       + ++             +                +I  A     + V+
Sbjct: 544 PTDDGVVDADVTLDRLVEAVEEHGGPAYEWRQISPEDKQDGGQPGGNIRNAFLFDPERVQ 603

Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
            + +                       P   +    +   +R+ +        + ++V+ 
Sbjct: 604 FVDREGGDATTAVEVVEGGRGAELSVSPGRISPRDGAWDSSRKPLVGHFRALNRDVYVVT 663

Query: 162 IHLKSFCFLDSLEN----TYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            H  S    +SL          S +    QA  ++D+  +    +     V+ GD N   
Sbjct: 664 NHFNSKGGDESLHGVHQPPRRTSEAQRHAQAGLVRDFAEELLAVDPEANLVVMGDLNDFQ 723

Query: 216 NYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                     + +  +  L                   N   +D+ +++Q     +  + 
Sbjct: 724 FSR-----TLEILTADGPLHNPMTDLPVEERYNYVFDGNSQALDHILVNQALAGRVEYDI 778

Query: 275 FSEILYNEDDIKSRGKRLSDHCP--ISID 301
                   D       ++SDH P  + +D
Sbjct: 779 ARINSEFSD-------QVSDHDPQVLWLD 800


>gi|320334572|ref|YP_004171283.1| endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM
           21211]
 gi|319755861|gb|ADV67618.1| Endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM
           21211]
          Length = 1195

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 90/328 (27%), Gaps = 55/328 (16%)

Query: 20  VAQKVRLVSWNINTLSEQ-------------EGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
               VR+   N+                   +  +   N+          +    K L+A
Sbjct: 507 QNATVRVAGANVLNYFTALVNSNTGCTTDGVDANARGANNCGEFLRQQAKVVAALKGLNA 566

Query: 67  DIVFLQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           D+V L E+ +    A             +      H+     + IH A+  +        
Sbjct: 567 DVVTLMEVQNNGDKALANLTDALNAAVGAGTYDYIHTGTIGTDAIHVAMIYKP------A 620

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS-FCFLDSLENTYSPSCS- 182
              P+   +   +   +R  +    + N G    V+  HLKS      S +      C  
Sbjct: 621 NVTPVGAYRIDNNNVYSRPPLAQTFKDNHGGVFTVVANHLKSKGSCPTSGDIDNGQGCWN 680

Query: 183 -LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
            L  QQAQ L +++            ++ GDFN   N    N     TI          +
Sbjct: 681 TLRVQQAQALLNFVDTLKTATGDQDVLLMGDFNAYGNEDPIN-----TIVAGGFESLNKR 735

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------- 289
                  + +       +D+ +        +   +   I  +E  +              
Sbjct: 736 IPAEDRYSYQFGSLFGYLDHALATNTLAGQVTGITEWHINSDEPTVADYNVEFKNVPGCT 795

Query: 290 --------------KRLSDHCPISIDYD 303
                          R SDH P+ +  +
Sbjct: 796 SASCTGLDLYGPGPFRASDHDPVLVGLN 823


>gi|85711701|ref|ZP_01042758.1| Exonuclease III [Idiomarina baltica OS145]
 gi|85694561|gb|EAQ32502.1| Exonuclease III [Idiomarina baltica OS145]
          Length = 269

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 76/312 (24%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ +S+NIN                   +    L+        D++ LQE  +       
Sbjct: 1   MKFISFNING----------------IRARLHQLQAMIDKHQPDVIGLQETKVHDDQFPQ 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +                   H  +A+  K      Q     G  +    A 
Sbjct: 45  QAVEDMGYHV------------NFFGQKGHYGVALLSKKPLTNVQK----GFPNEPEDAQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +      +G  + VL+       F       +     + +Q  + L +++      
Sbjct: 89  RRMIMGDYPLDDGATVRVLN-----GYFPQGESRDHPTKFPMKAQFYRDLINYLNDDLSP 143

Query: 202 LVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKE 240
             P ++ GD N                               D+   +     +  +   
Sbjct: 144 EQPVIVMGDMNISHQDRDIGIGETNAKRWLRTGKCSFLPEERDWLNEVLDWGLIDTYRTL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              + N       +           ID  +  Q       +          D      ++
Sbjct: 204 NPEQDNEFSWFDYRSRGFDDNRGLRIDLILATQTLADRCEESGI-------DYELRGIEK 256

Query: 292 LSDHCPISIDYD 303
            SDH PI   + 
Sbjct: 257 PSDHAPIWSQFS 268


>gi|212696938|ref|ZP_03305066.1| hypothetical protein ANHYDRO_01501 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676026|gb|EEB35633.1| hypothetical protein ANHYDRO_01501 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 348

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 100/321 (31%), Gaps = 60/321 (18%)

Query: 18  ASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             + +  R+++WNI               G  ++  +          +   +KN++ADI 
Sbjct: 49  PEIGKNYRVMTWNIGYGGLDKDTDFFMDGGQMVFPINKNHVEKSIDHIISTSKNINADIK 108

Query: 70  FLQEMG-------SYNAVAKVFPK--------NTWCIFYSTERLINHSKRDSNNDIHTAI 114
             QE+          N V K+             +   +    +    K  S     TA 
Sbjct: 109 LFQEVDYDSKRSFHINQVDKLRENFLGSSTFALNFKTDFIPYPIPPMGKVQSGIMTQTAF 168

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            ++K      +  +       +  RA N     + ++ + KK+ ++++HL ++   +   
Sbjct: 169 KIKKSKRYQQEIPHKFPTRLVNLKRAFN--PSYIDIKNSDKKLVIVNVHLDAYESGNKG- 225

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------------YLGNN 221
                       Q + + D+I ++ +     ++ GDFN++++                  
Sbjct: 226 ---------RVAQTKEIIDFINKEYKKGNYVLVGGDFNQELSAKFKKLPEGIWNPSPFPK 276

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
           +   K I             + +    K       ID F+   N                
Sbjct: 277 EMLTKNIKLYYDKNGKTSVVNDKPYTGK-DAYLSTIDGFLATDNIKIK-----------T 324

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                    + SDH P+ +++
Sbjct: 325 IKTQTKENFQYSDHNPVVMEF 345


>gi|326336417|ref|ZP_08202587.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sp. oral taxon 338 str. F0234]
 gi|325691290|gb|EGD33259.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sp. oral taxon 338 str. F0234]
          Length = 347

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/353 (12%), Positives = 93/353 (26%), Gaps = 66/353 (18%)

Query: 2   IRKYVLALVFFLVPCT---ASVAQKVRL---VSWNINTLSEQ-------EGVSLWKNSVK 48
           ++K+ L     L   +    + ++  ++     +N+  L +        +          
Sbjct: 1   MKKFCLPFCILLTLNSLFVEAQSKTYKVRTVAFYNVENLFDTINDPKKFDDDRTPTGKDH 60

Query: 49  RTTSDY-----------TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
            T+  Y             + +       D V L E+ + + V  +         Y    
Sbjct: 61  WTSEHYFDHINKLSTTIAKIGKDVTGQAPDFVGLAEVENRDVVEDLINSEALKGNYYGIV 120

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-RAGNRRAVELLVEINGKK 156
             N         I  A   ++   +  + S   L  KD+   R   R  + +  E++G++
Sbjct: 121 HYNSP---DARGIDVAFLYKQGVFKPTKTSKHFLDIKDAAGKRRYTRDQILISGEMDGEE 177

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP---FVIAGDFNR 213
           I  +  H  S    ++       +   L + A  L   I     ++ P    +  GDFN 
Sbjct: 178 IHFIVNHWPSRSGGEA-------ASRPLREAAAALNKRIFDSLTTINPMAKVISMGDFND 230

Query: 214 KINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM------ 262
                G             +   +                    +    D F++      
Sbjct: 231 DPTNSGFKKVLKTKADKNKVRQGELYNPMESMYKKGIGTLAYRDSWSLFDQFIITYGYLA 290

Query: 263 ---------------DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                                      ++   +      S     SDH P+ +
Sbjct: 291 PEGKGYKYWKAGVFNSPELANP--SGRYAGYPFRSYANGSYTGGYSDHFPVYL 341


>gi|46201082|ref|ZP_00055781.2| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 263

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 77/306 (25%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RLV+WNIN                       LL Q A  ++ DI+ LQE+        +
Sbjct: 1   MRLVTWNIN----------------SIRLRIDLLSQVASVMNPDIICLQEI---KVDDPL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +          +            +  +A+  +      +     G  D       R
Sbjct: 42  FPLDQCR------EMGFGHIAFHGMKGYNGVAILSRLPIAEWRPMSRCGRDD-------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E       V    L      D  +   +   +      + +  W   +     
Sbjct: 89  RHLMARLENG-----VQIHCLYIPAGGDIPDPETNDKFAHKLDFVREITAWAAAEIRPED 143

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++AGDFN                   +     D     +     +             
Sbjct: 144 KVILAGDFNIAPLENDVWSHKQMLKVISHTPAEVDLLNAFLASVPFVDAMRHFVPPEDKL 203

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +       L                    + SDH P
Sbjct: 204 YTWWSYRSPDWQKNDRGRRLDHVWVTPALAPSLRG-------MLVAREARAWTQPSDHVP 256

Query: 298 ISIDYD 303
           + +D+D
Sbjct: 257 VMVDFD 262


>gi|270296071|ref|ZP_06202271.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D20]
 gi|270273475|gb|EFA19337.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D20]
          Length = 267

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 83/280 (29%), Gaps = 34/280 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + ++ ++S+N+   + ++GV+ W+     T        +  K    DI+ +QE   +   
Sbjct: 14  SSQLTVISYNMRYGTAEDGVNAWEFRKPAT-------IKMIKKHKPDILGVQEALDFQLA 66

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +     +           H    ++   +       +       S P +     +  A
Sbjct: 67  FILENCTNYEAVGVGRIDGKHDGEHASIMYNKKKIELLEWGNFWLSSTPEIP-SIGWDAA 125

Query: 141 GNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             R A   L++     +K + ++ HL     +               +    + + I + 
Sbjct: 126 CTRTATWALLKDKKTMEKFYYVNTHLDHVGRV------------ARKEGLNLILEKIQKI 173

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P ++ GDFN +           K ID   S  +            ++      ID
Sbjct: 174 NPDNFPLILTGDFNMEHTDSSIQKLNEKMIDARTSAKKTDSFGTFNGWGTRS----SIID 229

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           Y                        +  +    +SDH PI
Sbjct: 230 YIYY--------KGFKMCTEYVTIREKYAGKTFISDHYPI 261


>gi|119486376|ref|ZP_01620435.1| hypothetical protein L8106_17019 [Lyngbya sp. PCC 8106]
 gi|119456589|gb|EAW37719.1| hypothetical protein L8106_17019 [Lyngbya sp. PCC 8106]
          Length = 282

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 94/306 (30%), Gaps = 47/306 (15%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            +L +   + P   + A+ + ++S+N+ +    +             +D  L+ +  + +
Sbjct: 15  ILLVMFVAIAPTFPASAEPLSIISYNVESDDLDD-------------TDPHLVAEDIREI 61

Query: 65  -DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
             AD+  L E+    A               TE +        +    T    + +    
Sbjct: 62  VGADLWGLSEVADQAAAD-----------IFTEAVAVPGSDFKSIFGTTGSLDKLQI-IY 109

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            Q    LL  ++  +  G+R  +    +        L                   S S 
Sbjct: 110 NQNRLDLLDHEELDNIGGSRSPLVAHFKFLSTGQEFLFTVNHF----------NRGSESK 159

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTIDPNDSLIR-----F 237
            +QQA+ L+DW   +    +P +  GD+N   +      +  +      D +        
Sbjct: 160 RNQQAENLRDWAAAQS---LPVIAVGDYNFDFDLDKKKGNKAFDLFVRKDVMTWIKPNCL 216

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                       + +    +DY  + Q A K+        +       +   +  SDH P
Sbjct: 217 KTNSCPLTGTQCDPKYASILDYVFVSQMAKKW--PCESDILFVQNQVCQKEKEGFSDHYP 274

Query: 298 ISIDYD 303
           +  ++ 
Sbjct: 275 LMANFS 280


>gi|325856384|ref|ZP_08172100.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
 gi|325483568|gb|EGC86540.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
          Length = 347

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/352 (12%), Positives = 94/352 (26%), Gaps = 64/352 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50
           +RK +  L   ++   ++ AQK      +  +N   L +        +     + S    
Sbjct: 1   MRKLLFVLFCTVLFGASASAQKKFSVYAVGFYNQENLFDCMHDKGKNDYDFTPEGSYHWN 60

Query: 51  T----SDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
                     +      +  D+        + L E+ + + +  +  +       +    
Sbjct: 61  EMKYTHKLHNMATVLSEMGTDVLPDVGCALIGLAEVENDHVMRDLTAQPE---LAARNYQ 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +   +  I  A+    K   V      P +      S    R  + +   + G+ +
Sbjct: 118 YVHIEGPDHRGIDCALIYNPKLFSVRNTKLVPYVYDLPKDSMRATRGFLTVSGTLAGEHV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V+  HL S                    Q + LKD + +  +  V  ++ GD N     
Sbjct: 178 TVVVCHLPSRGADSYYRELGGR-------QVKALKDSLLRD-DPKVKVLVMGDMNDDPTN 229

Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
               +      +       +     +           +        D  +M         
Sbjct: 230 KSIRECLSAKAEISEVGPDDMYNPWYNVLVKEGTGTLQYQGKWNLFDQILMSPGLLNKEN 289

Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
           ++ FSE+ + +  I  R                           SDH P+  
Sbjct: 290 RKDFSELRFWKSQIFRRDYLFQETGKYKGNTKRTTAGGVWLDGYSDHLPVVA 341


>gi|71034157|ref|XP_766720.1| sphingomyelin/lysocholinephospholipid-phospholipase C [Theileria
           parva strain Muguga]
 gi|68353677|gb|EAN34437.1| sphingomyelin/lysocholinephospholipid-phospholipase C, putative
           [Theileria parva]
          Length = 314

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 87/312 (27%), Gaps = 35/312 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + ++S+N+  +              R    Y  L +  +    D++ LQE    N   
Sbjct: 9   DTLSVMSYNVQCIPWYLAPGYNIGIRARILPKY--LVELVRKYAVDVLILQECFDRNVFN 66

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGA 133
                    + +ST+ +   +  DS  D            + +  +   + +        
Sbjct: 67  TFKLALQTLLPFSTDLIGLKNDWDSTVDNSNRWLILTNGGVCIMSRYPILERHQLIFKNC 126

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           +++ S A ++ A   ++   GK++ V+  HL+++      +         +    + L  
Sbjct: 127 RNTCSLA-SKGACVAVISKAGKRVNVVGTHLQAY--DGPAKTVRQKQYKEIIHWLELLSR 183

Query: 194 WITQKKESLVPFVIAGDFNR-KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                     PF++AGD N   +             + N                +    
Sbjct: 184 S-EHGVSDDDPFILAGDLNTCCLTDTPEFKAMLSPREKNFIKFSHTLGDKDPTYCSITND 242

Query: 253 NK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR-----------GKRL 292
                         DY +          Q    + L+    ++                 
Sbjct: 243 YCKMCNVDSISSVFDYILAGPGVRVVHPQTVVRDKLHAPIRVRKYYLHCIGTCTMETYNP 302

Query: 293 SDHCPISIDYDF 304
           SDH P+     F
Sbjct: 303 SDHYPVYSILAF 314


>gi|270294111|ref|ZP_06200313.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275578|gb|EFA21438.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 361

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 62/305 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               + +++ ++NI+               + T      + +Y +    D++  QE G  
Sbjct: 98  TPAGKYLKIATYNIHNFGG-----------EITGYSCKEIARYMQQEGVDVLCFQEFGDN 146

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +     FP ++     S          DS         V+      +   YPL   +   
Sbjct: 147 SD----FPTDSIRRVLSHWSHALIPSEDS---------VKGVLPIAVFSRYPLANHRFIT 193

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQA------ 188
            +  +  ++   V +    I +++ HL++                  +    QA      
Sbjct: 194 YQQSSNCSMMCDVAMGTDTIRLINNHLQTTSVSQKRRKWERELATDDTRREVQAAKDAAG 253

Query: 189 --------QWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   +  + ++          P ++ GDFN   +    +    KT+        F 
Sbjct: 254 TLHENFMKRATQTYVISHYAKTSPYPVLLCGDFNSIPSSYTYHH-LRKTLKDG-----FR 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +      +  +  + IDY     +                           SDH P+
Sbjct: 308 TAGNGYMYTYRYAKRMLRIDYIFHSPSLK-------------GIAYYSPDLDLCSDHNPV 354

Query: 299 SIDYD 303
            ++ +
Sbjct: 355 IMEVE 359


>gi|170703657|ref|ZP_02894392.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10]
 gi|170131435|gb|EDT00028.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10]
          Length = 271

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 81/300 (27%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +  +   D++ LQE          
Sbjct: 14  MKIATWNVNSLN----------------VRKQHVLDWIAHSGTDVLCLQE---------- 47

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    I +    +    +  +A+  ++   + +S  +             
Sbjct: 48  LKLPDEKYPRADLEAIGYRSWFTGQRTYNGVAILVRDTLAVDESDVVRNIPGFDDPQQRV 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV +        + ++  +  +    DS +  Y        Q    L  W++ + +   
Sbjct: 108 IAVTVE------GVRIVSAYFPNGQSPDSDKFVYK------MQWLDALHAWLSAEMQRYP 155

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 156 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDAFRCFEQPEKTFT 215

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D +    ++ SDH P+  
Sbjct: 216 WWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEV-------DRLPRTWEQPSDHTPVVA 268


>gi|300115398|ref|YP_003761973.1| exodeoxyribonuclease III [Nitrosococcus watsonii C-113]
 gi|299541335|gb|ADJ29652.1| exodeoxyribonuclease III [Nitrosococcus watsonii C-113]
          Length = 254

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 89/305 (29%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                   ++ +  + +    D + LQE        K+
Sbjct: 1   MKIATWNVNSL----------------RVRFSQVVDWLEIHQPDALALQE-------TKL 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRAGN 142
             +N     +       +    S    +  +A+  +   + +    P L           
Sbjct: 38  VDENFPQEAFKDI---GYHAVYSGQKTYNGVAILCRQEPKDILTDLPNLVDS-------Q 87

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR + + ++     I VL++++ +   + S +  Y             +KD++ +     
Sbjct: 88  RRILGVTLD----DIHVLNLYVPNGSEVGSEKYAYKLD------WLGRIKDYLQEALVEY 137

Query: 203 VPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GDFN                         +   + +          +  + +  
Sbjct: 138 PKLIVLGDFNVAPADQDVYDPEVWHETILCSTPEREALQEILALG--FQDSFRLFEQQAQ 195

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           +      +           ID  ++ +      +           D    R  R SDH P
Sbjct: 196 SFSWWDYRGGAFHRNRGLRIDLILISKALVSKCMGCVI-------DKEPRRLPRPSDHAP 248

Query: 298 ISIDY 302
           +   +
Sbjct: 249 VIATF 253


>gi|46201885|ref|ZP_00208288.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 258

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +  +   D+V LQE+   +     
Sbjct: 3   LRIATWNVN----------------SVRARLGNVLDWLGSFAPDVVLLQEIKCQD----- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +         +  +A+  ++              D  +R    
Sbjct: 42  -----HDFPRLEIEAAGYQTAVHGQKSYNGVAILSRHAMSDISLRLPGDESDEQARY--- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E   +   +  ++L +       +  Y  +          L+          +
Sbjct: 94  ------IEATIEGWRLASLYLPNGNPAPGDKYDYKLA------WMARLRAHAQSLLTQDI 141

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PFV+ GDFN         D                 ++ I        F           
Sbjct: 142 PFVLGGDFNICPTDDDVYDPPNWQNDALCRPDSRAAFRAIVNLGLTEAFRALHPEEKGRY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+F++   A   L          + D      ++ SDH P+ 
Sbjct: 202 SFWDYQAGAWQRDEGLRIDHFLLSPRAADHLQAC-------DIDRAPRGKEKASDHTPVW 254

Query: 300 IDYD 303
           I+  
Sbjct: 255 IELS 258


>gi|326521854|dbj|BAK04055.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 396

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 84/328 (25%), Gaps = 40/328 (12%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           P   +   + RLVS+NI      +        ++  +  +    +    K+ +AD++ +Q
Sbjct: 64  PDAGADGHQFRLVSYNILAQVYVKSAFFPHSPSASLKWKARSKAVLTELKSFNADLMCIQ 123

Query: 73  EMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------ 125
           E+  Y     K    + +   Y                  +   ++K+ +          
Sbjct: 124 ELDEYETFYRKNMESSGYSSIYVQRSGDKRDGCGIFYKPKSVELLQKEVIHYNDLVETCL 183

Query: 126 ----------------------QSYPLLGAKDSFSRAGNRRA--VELLVEINGKKIWVLD 161
                                 +     G  D       R    +    +++     +L 
Sbjct: 184 LDDTVISAPSNNSSPSEESSGKEDNKKRGDPDDPRVRLKRDCVGLLAAFKLSDPCEHILI 243

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           +      +     +        L  +    +  I+ K       +IAGDFN        N
Sbjct: 244 VANTHIYWDPEWIDVKLAQAKYLLSKVFEFEKIISNKFTCKPSVIIAGDFNSTPGDKVYN 303

Query: 222 DDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ES 274
                + +  D         +          N        +DY  +  +           
Sbjct: 304 YLVSASSESTDEAPIKLRSLYAANGGEPEFTNCTPGFTGTLDYIFLSGDNSIKPTTLLRI 363

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 + +         SDH PI  D+
Sbjct: 364 PRGGSPDVEGGLPNFHHPSDHLPIGADF 391


>gi|254444166|ref|ZP_05057642.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
 gi|198258474|gb|EDY82782.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
          Length = 307

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 98/311 (31%), Gaps = 22/311 (7%)

Query: 2   IRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSV--KRTTSDYTL 56
           IR   +++ + L   T    +    +R+ ++N+      + +      V   +  S+ T+
Sbjct: 6   IRVLAVSVTWLLASVTCLSQESIETLRVATYNLRNYLAMDRIVEGDFRVNYPKPESEKTV 65

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +R+    ++ D++ +QE+GS   + ++               +       +         
Sbjct: 66  VRESILAVEPDLLAIQEIGSEELLLELRDDLANEGLVYEGYFL---LEADDQTRKIGALW 122

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLEN 175
                        +        +   R  +EL ++   G+ + +  +HLKS    D    
Sbjct: 123 NGALKVRPIAHTDMSFPFFGDRKKIKRGLLELQLDDFGGEPLSLFVVHLKSRYTSD---K 179

Query: 176 TYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
               S    + +A+  +D I       S+  F+I GD N   +         +       
Sbjct: 180 RDPKSARRRTSEAEAARDRILERFPDPSVSRFIIMGDLNDYRHTSSVRRFLERGDVRISV 239

Query: 234 LIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +     E      +  K       IDY +                 +Y+ ++      + 
Sbjct: 240 IQEARDESGLIWTHFYKKGGEYSLIDYILCSPGLED---ASEMKSAIYDSENY----YQG 292

Query: 293 SDHCPISIDYD 303
           SDH  +  +  
Sbjct: 293 SDHRLVWTELT 303


>gi|167569725|ref|ZP_02362599.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia oklahomensis C6786]
          Length = 286

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 84/308 (27%), Gaps = 52/308 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+SWNI    + +G           T D       A+ L D D++ +QE+        
Sbjct: 1   MRLISWNIQWGRDADG-----------TVDLARTIDAARRLVDFDVLCMQEVTRGFRALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              S +  A++         +    +                A+  +        + L  
Sbjct: 50  GGPSDDQYAELAALLPGYSVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERVMRHALPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              + + +  R A+E+ +      + V+  HL+ +            +   L ++A    
Sbjct: 110 PASAAAPSMPRCALEVTLRAPLGALRVVVTHLEYYSA--EQRLAQVDALRRLHREAAAHT 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                 +    PF         ++ GDFN                D    +  +      
Sbjct: 168 RASAPPETPTGPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHPG 227

Query: 244 RCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                              +  D+  +       L +                  R SDH
Sbjct: 228 ETPPMTAGVYDTEQWKEGPLTCDFAFVTDTLIGRLSRCEI-----------DGAVRASDH 276

Query: 296 CPISIDYD 303
            PI+++  
Sbjct: 277 QPIALELS 284


>gi|260464219|ref|ZP_05812412.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
 gi|259030022|gb|EEW31305.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
          Length = 289

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 83/326 (25%), Gaps = 72/326 (22%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           VL L    +P T        + +WNIN                       ++ +      
Sbjct: 6   VLELAGLALPRTGFPRMPFSIATWNIN----------------SVRLRMPIVERLLVEQA 49

Query: 66  ADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            D++ LQE  +       K F K  +                     +  +A   +    
Sbjct: 50  PDVLCLQETKVPDELFPEKAFRKLGYEHIA-----------FHGQKGYHGVATVARRPIA 98

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           + +       +DS         + + V   GK I V + ++ +    D  +   +     
Sbjct: 99  VVEKRRFCEIEDSRH-------LSVTVRAGGKTILVHNFYVPAG--GDEPDPVINKKFKH 149

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--NYLGNNDDFWKTID------------ 229
                  +   I  + + +   V+ GD N     + + ++      +             
Sbjct: 150 KLDFVAEMNA-IRAEHDEVSASVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETENFEAM 208

Query: 230 --PNDSLIRFPKEKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSE 277
               + +        S          +            +D+     N            
Sbjct: 209 RLAGNWIDLMRLNVPSEQKLYTWWSYRAQDWEASNRGRRLDHVWSSPNLVPSFTG----- 263

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
             Y    +    +R SDH P+   +D
Sbjct: 264 --YEILRLARGWERPSDHVPVIARFD 287


>gi|182437355|ref|YP_001825074.1| hypothetical protein SGR_3562 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178465871|dbj|BAG20391.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 295

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 81/291 (27%), Gaps = 55/291 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYN 78
            +R+ ++NI+  +  +GV            D        + L AD++ LQE+       +
Sbjct: 43  PLRVATYNIHAGAGVDGVF-----------DLDRQTAELRALRADVIGLQEVDRHWGDRS 91

Query: 79  AVAKVFPKNTWCIFYSTERLINHS-----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +  +    +         +S       D   +   A+  R + V         L  
Sbjct: 92  EWRDLAGELARRLRLHVSFAPIYSLDPARPGDPRKEYGVAVLSRYRIVSAENHEITRLST 151

Query: 134 KDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +D            E++V + G  + V   HL            Y P  ++   Q    +
Sbjct: 152 QDPNPAPAPAPGFGEVVVRVRGLPVHVYTTHL-----------DYRPDPAVRVAQVADTR 200

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             + + +    P ++ GDFN +          W+ +   D                    
Sbjct: 201 RIMAEDRG---PKILLGDFNAEPA-APELAPLWRELADADP----------GAPTFPAQD 246

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ID+  + +                            SDH P+  D  
Sbjct: 247 PVKRIDFVAVSRGGPG---------TGITVRKAWVPESVASDHRPVVADLS 288


>gi|163745969|ref|ZP_02153328.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanibulbus
           indolifex HEL-45]
 gi|161380714|gb|EDQ05124.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanibulbus
           indolifex HEL-45]
          Length = 333

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 91/333 (27%), Gaps = 54/333 (16%)

Query: 24  VRLVSWNINTLS----EQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ ++N+   +    +   +        R           L      LDAD + + E  
Sbjct: 1   MRVATYNVEWFASLFDDDNRLYDDGGWSSRYNVTRAQQTAALGLVFTALDADAIMVIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           ++           +     + R        SN+     IA+     ++  +  P      
Sbjct: 61  NHGRRQSTVAALKYFAARFSLRARAAVMGFSNDTEQE-IALLYDPDKLTARHAPQAATGA 119

Query: 136 SFSRAGNRRAVELLVEIN-----------------GKKIWVLDIHLKSFCFLDSLENTY- 177
                  R  +++    +                 G    V+  HLKS     +      
Sbjct: 120 PRFDQTLRIDLDVDATKDAVVFSKPPLELEVTTKAGFAFQVIGAHLKSKAPYGAKSEADV 179

Query: 178 ----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------- 226
                 +      QA WL+  I     +  P ++ GD N           F +       
Sbjct: 180 LRIAIANRRKQLAQAIWLRRRIDMHLAADRPVMVMGDLNDGPGLDEFESLFGRSSVEIIL 239

Query: 227 ------TIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESF 275
                   DP+       +   +  +A   +  +       +DY ++         +   
Sbjct: 240 GEGEAALFDPHAKQALSRRLGAAPTSARFWIAPEERFLQALLDYIMVSPQIRARDARWRI 299

Query: 276 SE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303
                    +  + ++      SDH P+++D D
Sbjct: 300 WHPMDDPACWRNEALRDALLAASDHFPVTLDVD 332


>gi|296274120|ref|YP_003656751.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM
           7299]
 gi|296098294|gb|ADG94244.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM
           7299]
          Length = 325

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 110/326 (33%), Gaps = 51/326 (15%)

Query: 24  VRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++  ++N+   +           + + ++     + ++   K LDADI+  QE+ S   +
Sbjct: 3   IKFTTFNLFQFTAPPFSWYFKKDRFTKEQWEQKVSWIKDQIKLLDADIIGFQEVFSIEEL 62

Query: 81  AKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---AKDS 136
            ++  +  +  F S  +  IN            A+A R   +      Y L         
Sbjct: 63  KELCKELGYEYFLSVDKPKINKQNPTIYKTTVLALASRFPIISNKNVRYDLASIKKHNFK 122

Query: 137 FSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLD--------------------SLEN 175
              A +R  ++ ++E+  K  I V   HLKS    +                    +LEN
Sbjct: 123 DKFAFSRVPIKAIIELPNKTKIAVYVNHLKSNRLNEFEYIFKEGTSLKEKIEKTKVALEN 182

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPN 231
            +S +      +A  L   I +   S +P +   D N K   +      N  + + ++ +
Sbjct: 183 DFSSALKQRLIEASSLYMDIKE---SKIPTIFLCDLNDKEFSMTIDALTNKAYHEELEED 239

Query: 232 DSLIRFPKEKDS--------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
           + ++                      R   +    ++  ID+  + +     ++     +
Sbjct: 240 EYILFDSYYHCEKEIYNPHPEQKEIKRTPTSYYFSDENVIDFIFVSEQLKDKIVSYKVFD 299

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
               ++   +  +  SDH  +  + D
Sbjct: 300 EHLQKNRNGTLLE--SDHAQVVCEID 323


>gi|265753182|ref|ZP_06088751.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263236368|gb|EEZ21863.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 281

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 70/296 (23%), Gaps = 38/296 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           C       VR  ++N+   + Q+ ++ W             + Q+ K+ + DIV +QE+ 
Sbjct: 17  CAEEKKTDVRWATFNVRYDNPQDSLNNW-------QYRKDRVCQFIKDRELDIVGMQEVL 69

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                        +            +   +             +        P      
Sbjct: 70  HNQFQDLRAGLPEYDGIGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMM 129

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            +     R A     +        + ++     F    E     S  L+ ++ + +    
Sbjct: 130 GWDAVCVRIATWAKFKDKATGKIFMAVNTH---FDHVGEEARRQSALLIIRKIKEIV--- 183

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253
                   P V+ GDFN                   D+     +                
Sbjct: 184 -----GERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVD---YTFHDFAR 235

Query: 254 -----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   ID+  +         +                   LSDH P   D +F
Sbjct: 236 IPAEDCEKIDFIFVTPQVLVRNCEIPAEV----------PEALLSDHNPQLADLEF 281


>gi|150010182|ref|YP_001304925.1| hypothetical protein BDI_3605 [Parabacteroides distasonis ATCC
           8503]
 gi|255012556|ref|ZP_05284682.1| hypothetical protein B2_01514 [Bacteroides sp. 2_1_7]
 gi|149938606|gb|ABR45303.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 365

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 94/334 (28%), Gaps = 78/334 (23%)

Query: 4   KYVLALVFFLVPCTASV--------------AQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           K++L  +F  + C   V               + ++++++N+     +    +  N    
Sbjct: 68  KFLLIGIFSFLLCWGPVKRYFPFHSHKDVPREEVLKVLTYNVMAFGYKNHTKIAPN---- 123

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  + QY  N DADIV LQE  +  +   +     +    S     +   + S   
Sbjct: 124 ------KIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDA-LSMYPYRSVFYQSSTKF 176

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               IAV  K      +        +         +    V I GKK+ +++ HL+SF  
Sbjct: 177 QSFGIAVFSKYPLSNSRMVKYDSDYN--------GSSVHEVNIKGKKLTLINNHLESFKL 228

Query: 170 LDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFV 206
                  YS                       P+  + ++QA+ +   I          +
Sbjct: 229 TMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSKEIKN--AKGDYVL 286

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GDFN       +           D    F +                 ID  +   N 
Sbjct: 287 VCGDFNDTPISYAHRTI------QGDLTDAFAESGRGMGITYNQNFFWFRIDNILHSPNM 340

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                            +        SDH P+  
Sbjct: 341 TSM--------------NCSVDKVAYSDHYPLWC 360


>gi|50311541|ref|XP_455795.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74605084|sp|Q6CJU4|CCR4_KLULA RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|49644931|emb|CAG98503.1| KLLA0F15884p [Kluyveromyces lactis]
          Length = 790

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 91/325 (28%), Gaps = 43/325 (13%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               L+S+N   +  +  +      +           L++   + D D++ LQE+ +   
Sbjct: 452 NSFTLLSYNTLCHHYATPKMYRFTPSWALSWDYRREKLKEQLLDFDTDVICLQEVETLTY 511

Query: 80  VAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                P         +F++  R      +DS      AI  +K   +++ Q      +  
Sbjct: 512 EEYWVPLMEKYNYSCLFHAKTRAKTMHAKDSKKVDGCAIFYKKDQFQLVFQDSIDFSSAW 571

Query: 136 SFSRAGNR-------------RAVELLVE--INGKKIWVLDIHLKSFC-FLDSLENTYSP 179
              +  +R              A+   ++     + +WV+  HL     F D        
Sbjct: 572 RSHKKFHRTEDYLNRAMNKDNVALIAELKHLNTNENVWVVTTHLHWDPQFNDVKTFQVGV 631

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL--------------------G 219
               L    +             +P VI GDFN +++                       
Sbjct: 632 MLDYLETLIKQHHHVNNNNDIKKIPMVICGDFNSQLDSAVVELFNSGHVTANHKDIDQRD 691

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEI 278
                 K    N SL             N        IDY     Q+     +     E 
Sbjct: 692 FGYMSQKNFSHNLSLRSSYGAIGELPFTNMTPSFTDVIDYIWYSSQSLRVRGLLGKIDEE 751

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
             ++       K  SDH P+   ++
Sbjct: 752 YASKFIGFPNDKFPSDHIPLVTRFE 776


>gi|298293932|ref|YP_003695871.1| endonuclease/exonuclease/phosphatase [Starkeya novella DSM 506]
 gi|296930443|gb|ADH91252.1| Endonuclease/exonuclease/phosphatase [Starkeya novella DSM 506]
          Length = 269

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 83/285 (29%), Gaps = 60/285 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
               ++RL++WNI+     +              D   +         D++ LQE+ +  
Sbjct: 5   PPPGRLRLMTWNIHGGIGPDRRF-----------DLDRIASLVAKHAPDVLALQEIDTRG 53

Query: 79  -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             +  + P     I + T      ++  +  D H   A+  +        + L     S 
Sbjct: 54  RDIDCLAPLRGLDIHHFT-----EARTIAVPDGHYGHALFSRWPTSDVVLHDL-----SV 103

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R A+E  +      + ++ +HL  F F                +QA  L     +
Sbjct: 104 WRYEPRIAIETQIATPFGPLHLVAVHLGLFIF-------------ERRRQAGMLAAMARR 150

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                +P V+ GDFN   ++          +     L                 +  + +
Sbjct: 151 V--RGMPTVMMGDFNDWFSFGQVTRTMSHVLPERTRL-----------RTFPAQKPALRL 197

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D                       +       + +SDH PI +D 
Sbjct: 198 DRVYCSAPGM------------LADAFTDPAARAISDHLPIIVDL 230


>gi|330448477|ref|ZP_08312125.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492668|dbj|GAA06622.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 352

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 109/343 (31%), Gaps = 55/343 (16%)

Query: 14  VPCTASVAQ-KVRLVSWN-INTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIV 69
              +  +AQ  +++ S+N +N L+  +    ++N  S+++       +         DI+
Sbjct: 9   FSSSTPIAQSTIKIASFNLLNYLAPPDAYYDFENIYSIEQWQKKQRWIVATLNAQQPDII 68

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             QE+ S + +  +  +  +  ++ T                 AIA +   +        
Sbjct: 69  GFQEVFSIDNLKTLLLEAGYP-YFETIDTPIVEGDFIYRSPVVAIASKFPILEASAVEAE 127

Query: 130 LLGAKDSFSRA--GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
              A+         +R+ +   ++I        +V  +  K   F D L  T +P+ + L
Sbjct: 128 SEAAQLMGWNKFDFSRKPLRATIDIPHIGATDCYVTHLKSKRSLFDDPLPETITPADTAL 187

Query: 185 SQQAQW-LKDW-----------------ITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           S   +  L +W                 + +++++  P ++ GDFN  ++          
Sbjct: 188 SGFIRQRLGNWGSAMQRGSEAALLQLAMVKRREQTQYPMILFGDFNDTLSSSCLEQLVAS 247

Query: 227 TI------------------DPNDSLIRFPKEKDSRCN-ANKNLRNKIPIDYFVMDQNAY 267
           ++                  D  +       +        +        +DY ++ Q   
Sbjct: 248 SVFGMSDSEIERLIHFYCLYDGWELFTSVNDDTSQPRPATHYYNGKGSVLDYILLSQEFN 307

Query: 268 KFLIQESFSEILYNEDD------IKSRGKRLSDHC-PISIDYD 303
              +   F    Y+ +D              +DH  PI +   
Sbjct: 308 AGYLGSLFEVSHYHTEDKHLVNSSFDIDGYSTDHAIPI-VTLS 349


>gi|220922845|ref|YP_002498147.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060]
 gi|219947452|gb|ACL57844.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060]
          Length = 269

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/306 (9%), Positives = 77/306 (25%), Gaps = 66/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                       L+R++   +  D++ LQE    N    +
Sbjct: 3   LTVSTWNIN----------------SVRLRIDLVRRFLDEVRPDVLCLQETKCPNDRFPL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +                +    +  +A+  +     Q+       +D+      R
Sbjct: 47  KELQGF---------GYPHIVFAGQKGYNGVAILSRLPLRSQEVMSFCERQDA------R 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +L    G    ++          D  +   +   +        L+ W    + S  
Sbjct: 92  HISAVLGPEAGAAAGIVLHDFYVPAGGDVPDAALNDKFAHKLAFMDELRAW--GGRRSTS 149

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                   +     +           +      +      
Sbjct: 150 PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVETERLETLRGEAGWIDTMRHLRPEPEKI 209

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  +    +   +               ++ SDH P
Sbjct: 210 YTWWSYRSPDWAAADKGRRLDHIWVTPDLAGTVRSVTV-------ARHARAWEKPSDHVP 262

Query: 298 ISIDYD 303
           ++++ +
Sbjct: 263 VTVELE 268


>gi|186682991|ref|YP_001866187.1| exodeoxyribonuclease III [Nostoc punctiforme PCC 73102]
 gi|186465443|gb|ACC81244.1| exodeoxyribonuclease III [Nostoc punctiforme PCC 73102]
          Length = 260

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 87/304 (28%), Gaps = 69/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  +  N   D++ LQE    +A    
Sbjct: 1   MKIATWNVN----------------SIRTRLEQVTDWLTNNPVDVLCLQETKVADA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-RAGN 142
                     S    + ++   S    +  +A+  +   +   S       D        
Sbjct: 41  ------EFPRSPFEQLGYNLYISGQKSYNGVALISRQPLLNVSSGFRAILPDLHHEWDEQ 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +R +  +++     + ++++++ +   + + +  Y        +    L +++     S 
Sbjct: 95  KRVITGVID----GVRIVNLYVPNGAAVGTEKYEYK------LRWLTALHEYLRVLALSE 144

Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247
               + GDFN  +     +                   + I        F K      N 
Sbjct: 145 PAICVCGDFNIALEDKDIHEQVSTENHIMATETERQALREILQLGFADAFRKFTTEGGN- 203

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  +    Y+              D    +  + SDH P+
Sbjct: 204 YSWWDYRAAAFRRNLGWRIDHHYLTPVLYERATSCII-------DAEPRKSTQPSDHTPV 256

Query: 299 SIDY 302
            +++
Sbjct: 257 IVEF 260


>gi|209883511|ref|YP_002287368.1| exodeoxyribonuclease III xth [Oligotropha carboxidovorans OM5]
 gi|209871707|gb|ACI91503.1| exodeoxyribonuclease III xth [Oligotropha carboxidovorans OM5]
          Length = 271

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 76/307 (24%), Gaps = 64/307 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              + +WNIN                       L+ ++ KN   D++ LQE      +  
Sbjct: 2   PFTIATWNIN----------------SVRLRIDLVAKFLKNRRPDVLCLQE---TKCIDD 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           VFP   +       RL       +    +  +A+  K   + +      G  D      +
Sbjct: 43  VFPLKRFQ------RLGYEHIALNGQKGYHGVAIVSKRPFLSKDIRMFCGKVD------S 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R       E  G    ++  +       D  +   +P           ++D      E  
Sbjct: 91  RHISVAFGESAGLAAPLVLHNFYVPAGGDIPDPALNPKFEHKLSFLDEMRDCTPLHAEDG 150

Query: 203 VPFVIAGDFNRKINYLG--NNDDFWKTID--------------PNDSLIRFPKEKDSRCN 246
              ++ GD N   +     ++      +                   +    +       
Sbjct: 151 ANHILVGDLNVAPHEHDVWSHRQLLNVVSHTPVECEKLLAVQAQGGWIDVARQRIPMDEK 210

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+  +                 +         +R SDH 
Sbjct: 211 VYTWWSYRAADWTVGNRGRRLDHIWVSPALGDK-------VRDFRILRDARSWERPSDHV 263

Query: 297 PISIDYD 303
           P++   D
Sbjct: 264 PVTAVLD 270


>gi|212711404|ref|ZP_03319532.1| hypothetical protein PROVALCAL_02477 [Providencia alcalifaciens DSM
           30120]
 gi|212685860|gb|EEB45388.1| hypothetical protein PROVALCAL_02477 [Providencia alcalifaciens DSM
           30120]
          Length = 297

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 84/287 (29%), Gaps = 45/287 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ ++NI            KN +    ++   L +    +DAD++ L E+ +  A +K
Sbjct: 46  SIKVATYNI-----------GKNELAADVANLDELSKAIAKIDADVIVLTEIDNKTARSK 94

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +       +        K    +     + +  K      Q   L         A  
Sbjct: 95  KVNQLEEIAKANKMDFAF-GKALDFDGGEYGVGILSKYKIEKSQVVNLPSGG-----AEQ 148

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +   +   G    ++ +              +    ++   Q + + D      E+ 
Sbjct: 149 RVVLLSQITKPGFDSPIIIMGTHL---------DWQKDPTIRIGQVRHILDATIGDTETG 199

Query: 203 VPFV------IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
              +      +AGDFN               I+         ++K         +   I 
Sbjct: 200 FDNIAASIKILAGDFNSTAKEQP--------IEEISYFWNPVEKKGVNYRTWPAVNPAID 251

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ID+    +     +       +    D    +  ++SDH P+  + +
Sbjct: 252 IDHIFTYKGQVWDVKN-----MTIPTDSKDFQWSKVSDHLPVIAELE 293


>gi|288574052|ref|ZP_06392409.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569793|gb|EFC91350.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 341

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 88/309 (28%), Gaps = 38/309 (12%)

Query: 2   IRKYV--LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           +R++   + L   L    A+ A  + + ++NI   +              +  D + L +
Sbjct: 1   MRRFTKKVILGALLAVIWAAQAPALVIGTFNIEYFNVSG-------KKAYSQEDCSYLAR 53

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             K  D D++ LQE+     +     K      YS                 +   +   
Sbjct: 54  LIKESDVDLLALQEIEGDATMRFFVTKFLPGWAYSGNDTGGRQDLYFLWRKDSVRILDGP 113

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK--SFCFLDSLENTY 177
            V     S+   G             + L +E   ++  ++++HLK  S    D  +   
Sbjct: 114 VVYGANGSFRFEGKSYRLHDRPPMVGLFLDIE-GDRRFHMVNVHLKSQSTRGKDDQDRAK 172

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +      Q   +   +   K    P  I GD+N                  +D     
Sbjct: 173 RYNDFKRGAQIDGINGIVGSLKG---PVFILGDYNV-----------------DDPKGTN 212

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-S-DH 295
                    +      K  +DY             +S+              KR  S DH
Sbjct: 213 FPLLSLPKGSYSYDDRKSRLDYI----GYLGIEKSDSWRLFEVETSIPARSTKRSQSPDH 268

Query: 296 CPISIDYDF 304
             + +D ++
Sbjct: 269 DMVLLDLNW 277


>gi|239927938|ref|ZP_04684891.1| exonuclease [Streptomyces ghanaensis ATCC 14672]
 gi|291436275|ref|ZP_06575665.1| exonuclease [Streptomyces ghanaensis ATCC 14672]
 gi|291339170|gb|EFE66126.1| exonuclease [Streptomyces ghanaensis ATCC 14672]
          Length = 259

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 79/303 (26%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ LQE          
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQEAKVAED---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   R + +    +       +A+  +          L G          R
Sbjct: 41  ------RFPFEELRELGYESAVNATGRWNGVALLSRVGLEDVVKG-LPGDPGYEGSEEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V      + V  +++ +   +D     Y        Q  + LK  +        
Sbjct: 94  A-----VSATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGER 142

Query: 204 PFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKDSRC-------------NANK 249
           PF + GD+N         D   ++ +       R                      +   
Sbjct: 143 PFAVLGDYNVAPTDDDVYDRAAFEGLTHVTPAERAALASLRETGLSDIVPRPLKYEHPFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID    +    K +            D  + +GK  SDH P+ +
Sbjct: 203 YWDYRQLCFPKNRGMRIDLVYGNAPFAKAVTDSYV-------DREERKGKGASDHAPVVV 255

Query: 301 DYD 303
           D D
Sbjct: 256 DLD 258


>gi|168182409|ref|ZP_02617073.1| exodeoxyribonuclease III [Clostridium botulinum Bf]
 gi|182674470|gb|EDT86431.1| exodeoxyribonuclease III [Clostridium botulinum Bf]
          Length = 253

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 82/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ SWN+N L      +                 ++      DI+ +QE  +       
Sbjct: 1   MRIYSWNVNGLRAVAKKNF---------------IEWIGEESPDILCIQETKLQENQLED 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   + +  ++S           +    ++ +A   K   +  +    +   DS  R  
Sbjct: 46  NIKNIDGYYSYFS----------FAAKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRI- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    K   +L+I+  +    +                 + L ++  +  + 
Sbjct: 95  --------LITEFKDFTLLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVKE 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247
               VI GD+N   N +   +            I+ +       +               
Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIK 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY  +  N    +        +Y            SDHCPI
Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPI 248

Query: 299 SIDY 302
            ++ 
Sbjct: 249 MLEL 252


>gi|160889855|ref|ZP_02070858.1| hypothetical protein BACUNI_02286 [Bacteroides uniformis ATCC 8492]
 gi|156860847|gb|EDO54278.1| hypothetical protein BACUNI_02286 [Bacteroides uniformis ATCC 8492]
          Length = 361

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 62/305 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               + +++ ++NI+               + T      + +Y +    D++  QE G  
Sbjct: 98  TPAGKYLKIATYNIHNFGG-----------EITGYSCKEIARYMQQEGVDVLCFQEFGDN 146

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +     FP ++     S          DS         V+      +   YPL   +   
Sbjct: 147 SD----FPTDSIRRVLSHWSHALIPSEDS---------VKGVLPIAVFSRYPLANHRFIT 193

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQA------ 188
            +  +  ++   V +    I +++ HL++                  +    QA      
Sbjct: 194 YQHSSNCSMMCDVVMGTDTIRLINNHLQTTSVSQKRRKWERELATDDTRREVQAAKDAAG 253

Query: 189 --------QWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   +  + ++          P ++ GDFN   +    +    KT+        F 
Sbjct: 254 TLHENFMKRATQTYVISHYAKTSPYPVLLCGDFNSIPSSYTYHH-LRKTLKDG-----FR 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +      +  +  + IDY     +                 +         SDH P+
Sbjct: 308 TAGNGYMYTYRYAKRMLRIDYIFHSPSLK-------------GIEYYSPDLDLCSDHNPV 354

Query: 299 SIDYD 303
            ++ +
Sbjct: 355 IMEVE 359


>gi|301383299|ref|ZP_07231717.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302063704|ref|ZP_07255245.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato K40]
          Length = 382

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 103/343 (30%), Gaps = 75/343 (21%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C+ +V        Q +++++WNI  L+                  + + +    +
Sbjct: 52  LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   +A ++P +T   ++  E + 
Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171

Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156
             H        + T       +   LQ   P+  A     +   + A+ +      +G K
Sbjct: 172 SPHIWGSVGRKLTTLSRFHIDSAERLQLPVPVPDANIISRQFQPKNALLVSYLPLRDGGK 231

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI- 215
           + V++ HL +    D              +Q    ++ + + +    P++I GDFN    
Sbjct: 232 LAVINTHLATAKPGDG----------TAHEQIAATENLLDKLEGGGTPWLIGGDFNLLPL 281

Query: 216 -----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPI------ 257
                      +    + +     +    +    +   +  +    +  N   I      
Sbjct: 282 GQYQRLPEQQRHGYAADSELHALWEKYPMIPNNTESSGTDRSQWLTHFPNDSRINGPDRT 341

Query: 258 -DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            DY     +  +     S      +          +SDH P+ 
Sbjct: 342 VDYLFYSPSLKR----VSARVRRDDTLL-------ISDHLPVI 373


>gi|170728213|ref|YP_001762239.1| endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908]
 gi|169813560|gb|ACA88144.1| Endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908]
          Length = 894

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/387 (11%), Positives = 97/387 (25%), Gaps = 101/387 (26%)

Query: 19  SVAQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSD------------------YTLL 57
           +    +R+ S+N+  L   +   G  L      +  +D                   T +
Sbjct: 471 ATQGDIRVASFNVLNLFTSDSDIGGPLNPMCKDQADADASRGCGRGAHSLEDYLLQRTKI 530

Query: 58  RQYAKNLDADIVFLQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRD 105
               K ++AD++ L E+ +             NA+    P      F        +    
Sbjct: 531 VNAIKEMNADVIGLMEIENNGFSEHSSIQYLLNAINAELPAADAYAFIEVNDADKYKGEF 590

Query: 106 SNND-IHTAIAVRKKNVR------------------VLQQSYPLLGAKDSFSRAGNRRAV 146
             +D I   +  R   V+                  V  +       +        R ++
Sbjct: 591 IGSDAITVGLLYRPSTVKPTGDAFVIATPEQHSVAGVATRDNNGTVEESPSYDKYQRHSL 650

Query: 147 ELLVEINGKKIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWI 195
               +I+ +K+ V+  HLKS                   +            A+ L + +
Sbjct: 651 AQTFQIHDEKLTVVVNHLKSKGSGCLEDWLEFSESKDPADLQGKCNEFRVSAAKVLGESL 710

Query: 196 TQKKES------------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------ 231
              +                P  +  D++            W T++              
Sbjct: 711 KDVEGGLLVIGDMNAYGMEDPVAVLTDYDASTAKREIVTASWTTLNGEVYEREGSKIDKG 770

Query: 232 -DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              +    +                 +D+ + +      L+      I   E D+     
Sbjct: 771 YGLVNLNTQAHGPATFGYSYSGELGNLDHALANTQVADKLVGIEDWNINSVESDLFEYPS 830

Query: 291 RL-------------SDHCPISIDYDF 304
           +              SDH P+ I  ++
Sbjct: 831 KYSGDLAKSENAFSSSDHDPVIIALEY 857


>gi|260436042|ref|ZP_05790012.1| exodeoxyribonuclease III [Synechococcus sp. WH 8109]
 gi|260413916|gb|EEX07212.1| exodeoxyribonuclease III [Synechococcus sp. WH 8109]
          Length = 288

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/315 (10%), Positives = 87/315 (27%), Gaps = 63/315 (20%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++    +    V++ +WN+N                   +    +  + ++   D++ LQ
Sbjct: 1   MLRVFDATGSAVQIATWNVN----------------SVRTRLDQVLSWLESEQPDLLCLQ 44

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E    + +                +             +  +A+  +      +      
Sbjct: 45  ETKVDDPL----------FPLEAFKSAGWHVHIHGQKAYNGVALISREPLEDVRCGFAGE 94

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             +         A + ++      + VL++++ +   L S +  Y  +          LK
Sbjct: 95  LPNDAEANDL-GAQKRVISAMLNGVRVLNLYVPNGSSLKSEKYPYKLA------WLGCLK 147

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTIDP--NDSLIRFP 238
            ++  +++   P  + GDFN  +                 +D   + +     + L    
Sbjct: 148 RYLDAQEQRGEPLCMVGDFNIGLEARDLPDPDRQTGGIMASDAERQALRDALGERLQDVF 207

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +  +           +           ID+  +                           
Sbjct: 208 RVFEPDSGHWSWWDYRSGAWDRDRGWRIDHVYLCDELLGLARSCVIH-------KRMRGN 260

Query: 290 KRLSDHCPISIDYDF 304
           ++ SDH P+S+  D+
Sbjct: 261 QQPSDHAPVSVVVDW 275


>gi|258626823|ref|ZP_05721630.1| exodeoxyribonuclease III [Vibrio mimicus VM603]
 gi|258580870|gb|EEW05812.1| exodeoxyribonuclease III [Vibrio mimicus VM603]
          Length = 268

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+NIN L                 +    L+        D++ LQE  +       
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEAFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +++                 H  +A+  K   V      + G         
Sbjct: 45  QEVEAMGYQVYFH------------GQKAHYGVAILCKQTPVEV----IKGFPTDSEEHQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +    + +G K  +L+       F       +        Q  + L  ++ + + +
Sbjct: 89  KRMIMATFADEDGNKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
               V+ GD N                        ++     ++ +T+     +  F + 
Sbjct: 144 TERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLMDWGLVDTFRQL 203

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                +       +           ID  +      +   +          D       +
Sbjct: 204 HPEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAETCQEAGI-------DYELRGIDK 256

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 257 PSDHAPIWAIF 267


>gi|301308230|ref|ZP_07214184.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300833700|gb|EFK64316.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 365

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 96/334 (28%), Gaps = 78/334 (23%)

Query: 4   KYVLALVFFLVPCTASV--------------AQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           K++L  +F  + C   V               + ++++++N+     +    +  N    
Sbjct: 68  KFLLIGIFSFLLCWGPVKRYFPFHSHKDVPREEVLKVLTYNVMAFGYKNHTKIAPN---- 123

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  + QY  N DADIV LQE  +  +   +     +    S     +   + S   
Sbjct: 124 ------KIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDA-LSMYPYRSVFYQSSTKF 176

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               IAV  K      +        +         +    V I GKK+ +++ HL+SF  
Sbjct: 177 QSFGIAVFSKYPLSNSRMVKYDSDYN--------GSSVHEVNIKGKKLTLINNHLESFKL 228

Query: 170 LDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFV 206
                  YS                       P+  + ++QA+ + + I          +
Sbjct: 229 TMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKN--AKGDYVL 286

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GDFN       +           D +  F +                 ID  +   N 
Sbjct: 287 VCGDFNDTPISYAHRTI------QGDLMDAFAESGRGMGITYNQNFFWFRIDNILHSPNM 340

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                            +        SDH P+  
Sbjct: 341 TSM--------------NCSVDKVAYSDHYPLWC 360


>gi|229098205|ref|ZP_04229152.1| Exodeoxyribonuclease [Bacillus cereus Rock3-29]
 gi|228685103|gb|EEL39034.1| Exodeoxyribonuclease [Bacillus cereus Rock3-29]
          Length = 252

 Score = 91.9 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NPEGYYTYW-----------NYAVKKGYSGTAIFMKKEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFEDFYMITLYTPNSKRGLERLDYRMEWEDDFRTYIKQL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                   +     + +  I     +  +     ++  A 
Sbjct: 139 PVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTRILEEGFVDTYRHLYPNQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     +            D   +     SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERIKGQI-----------TDAKINSEIMGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|196006481|ref|XP_002113107.1| hypothetical protein TRIADDRAFT_25440 [Trichoplax adhaerens]
 gi|190585148|gb|EDV25217.1| hypothetical protein TRIADDRAFT_25440 [Trichoplax adhaerens]
          Length = 273

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 91/299 (30%), Gaps = 37/299 (12%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
             +   A+ A KV++ ++NI TL +                    L +  +    D+  +
Sbjct: 2   LAIFSLAAEAGKVKIAAFNIQTLGKT---------KMGKQEVVAELVKILRRY--DLTLI 50

Query: 72  QEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           QE+   +  A+  +  +      YS   +++     S+     A   R     V    + 
Sbjct: 51  QEIRDSSGVAIQTLLDEVNKGHSYSYAMILSDRLGRSSYKEQYAFFYRTDLFSVQGNYHY 110

Query: 130 LLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             G + +   +  R    +  +I   GK+  ++  H      ++                
Sbjct: 111 DDGDESAGDDSFIREPFVVKFKITATGKQFVLIPCHASPSYAVEET-------------- 156

Query: 188 AQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              L D              ++ GDFN   +Y+ +++  +  +                 
Sbjct: 157 -DALADVYDDATTRFGESNAILMGDFNADCSYISSSEWSYVRLWTQSRFNWVIGSNADTT 215

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDY 302
             + N      +   +         +  +     ++ +   S  +   +SDH P+ ++ 
Sbjct: 216 TKSTNCAYD-RL--VLAGSRMQSDYVSGTAKVFRFDSEYGLSYDETTAVSDHYPVEMEL 271


>gi|159044435|ref|YP_001533229.1| putative Exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12]
 gi|157912195|gb|ABV93628.1| putative Exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12]
          Length = 259

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 79/300 (26%), Gaps = 68/300 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + ++NIN                   +    L  + +    D+V LQE+ S +A      
Sbjct: 3   IATFNING----------------IKARINALPDWLREASPDVVVLQEIKSVDAA----- 41

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                        + ++           +A+  K               D  +R      
Sbjct: 42  -----FPRELFEDMGYTVETHGQKSFNGVAILSKLPLEDVTRGLPGDDGDEQARW----- 91

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +E  V +    + V  ++L +       +  Y  +          LK    +   +  P 
Sbjct: 92  IEATV-MGDVPVRVCGLYLPNGNPAPGPKYDYKLA------WMARLKTRAAELLAAEEPA 144

Query: 206 VIAGDFNRKI---NYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANKNL 251
           ++AGD+N      +           +             N       + +          
Sbjct: 145 LMAGDYNIIPLDEDAARPEAWRKDALALPASRAAFREILNLGFTDAFRTRVPGPGHYSFW 204

Query: 252 RNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+ +M  +    +            D     G++ SDH P+ +D 
Sbjct: 205 DYQAGAWQRNDGIRIDHILMTPDCADLMRDC-------RIDAAVRGGEKPSDHVPVVVDL 257


>gi|326775772|ref|ZP_08235037.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326656105|gb|EGE40951.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 801

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 79/327 (24%), Gaps = 69/327 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79
            ++ + ++N+  L   +             + +  L +         DIV L+E+   N 
Sbjct: 491 DELAVATYNVENLDAGDD-----------QAKFDTLAEGVAVNLSSPDIVSLEEIQDDNG 539

Query: 80  V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                             A V        +       N    +   +I        + V 
Sbjct: 540 AVNDGTTGSEATLKRFTDAIVAQGGPRYAWRYIAPENNKDGGEPGGNIRNVFLFNPQRVS 599

Query: 123 ---------------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
                                V   + P      S + A +R+ +       G+ ++V+ 
Sbjct: 600 FTDRAGGDATTPVEAVKTWKGVRLSASPGRINPASPAWADSRKPLVGEFVFRGEPVFVIG 659

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKI 215
            H  S      L   Y      S +   QQA  +  ++T   ++      V  GDFN   
Sbjct: 660 NHFASKGGDQPLHGRYQEPTRSSETKRIQQAAEVNTFVTAVLKADRSAKVVALGDFNDFE 719

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                                      S   +     N   +D+ +              
Sbjct: 720 FSPT----MKTLTRGRALKPLITTLPPSERYSYVFDGNSQTLDHILTSPGVR-------- 767

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                          + SDH P  +  
Sbjct: 768 RPDYDVVHINAEFADQASDHDPQVVRI 794


>gi|260642592|ref|ZP_05416508.2| endonuclease/Exonuclease/phosphatase family protein [Bacteroides
           finegoldii DSM 17565]
 gi|260621395|gb|EEX44266.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides
           finegoldii DSM 17565]
          Length = 379

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/369 (11%), Positives = 92/369 (24%), Gaps = 84/369 (22%)

Query: 3   RKYVLALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKN-----------SVKR 49
           R  V  L+F +   +    +  + R+  WN   L +    SL  +           +  R
Sbjct: 23  RVAVTILLFVICSWSVPAQENIQFRVACWNTENLFDTRHDSLKNDYEFLPNAIRHWNYNR 82

Query: 50  TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLIN 100
                + + +    +       ++ L E+ +   +  +       +  +    +    + 
Sbjct: 83  YKKKLSDIARVITAIGEWNPPALIGLCEVENDTVLRDLTRRSPLQELDYRYVMTDSPDL- 141

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWV 159
                    I  A+  ++   ++L      +           R  + +  + + G  + V
Sbjct: 142 -------RGIDVALIYQRDLFKLLSSRS--ISIPVFRQHRPTRDLLHVNGLLLTGDTLDV 192

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINY 217
              HL S             S       AQ L+  +     +      +I GDFN   N 
Sbjct: 193 FVCHLPSRSGG------AKESEPYRLHAAQILRTEVDSVLHTRLHPQVIIMGDFNDYPNN 246

Query: 218 LGNNDDFWKT---------------------IDPNDSLIRFPKEKD-SRCNANKNLRNKI 255
                                          + P        ++   +   + K      
Sbjct: 247 KSIRKILEAEAPPIRSDSLDIAIHPATSPSSLSPLKLYHLLARKAKTANFGSYKYHGEWG 306

Query: 256 PIDYFVMDQNAYKFLIQESFSE---------------------ILYNEDDIKSRGKRLSD 294
            +D+ ++              E                       +            SD
Sbjct: 307 LLDHLIVSGTLLNTSGNFFTHEEKAKVCQLPFLLTDDKKYGGKEPFRTYKGMKYQGGFSD 366

Query: 295 HCPISIDYD 303
           H PI  D++
Sbjct: 367 HLPIYTDFE 375


>gi|256824866|ref|YP_003148826.1| exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547]
 gi|256688259|gb|ACV06061.1| exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547]
          Length = 307

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 80/327 (24%), Gaps = 70/327 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+N+N +   +                     +      D+V LQE+    ++   
Sbjct: 1   MRIASFNVNGIRACQTRGFE---------------HWLARRQPDVVSLQEVRCPVSLLPS 45

Query: 84  FPKNTWCIFYSTERLINHSK------RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                + + Y        +                   V ++             A  + 
Sbjct: 46  GVFGEYHLSYDPGDRAGRNGVAVLTREAPAAVRTFGAPVLRRAPGEEHTELTEPDAGPTL 105

Query: 138 SRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFL--------------DSLENTYSPS 180
            R     A     + V++    + V  ++L                          Y   
Sbjct: 106 PRELKEFAGEGRYIEVDLADAPVTVASLYLPKGGLPADLQEKMAKRMREAPDGGAKYDRK 165

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDF 224
              L+  A+ L         +   FV+ GDFN                         + F
Sbjct: 166 MRFLAGFAKQLDRSRKAAAAAGREFVVMGDFNVAHTERDVKNWRGNKNSEGFLPSEREWF 225

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESF 275
              + P   +     +                         IDY +      + +     
Sbjct: 226 GSILSPRTLVDVVRSQYPDTDGPYAWWSWMGQAFERDTGWRIDYHLATPTLARSVESAGV 285

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                  D   SR +RLSDH P+ +DY
Sbjct: 286 -------DKEPSRAERLSDHAPVVVDY 305


>gi|182435135|ref|YP_001822854.1| putative endonuclease/exonuclease/phosphatase family protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178463651|dbj|BAG18171.1| putative endonuclease/exonuclease/phosphatase family protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 781

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 79/327 (24%), Gaps = 69/327 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79
            ++ + ++N+  L   +             + +  L +         DIV L+E+   N 
Sbjct: 471 DELAVATYNVENLDAGDD-----------QAKFDTLAEGVAVNLSSPDIVSLEEIQDDNG 519

Query: 80  V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                             A V        +       N    +   +I        + V 
Sbjct: 520 AVNDGTTGSEATLKRFTDAIVAQGGPRYAWRYIAPENNKDGGEPGGNIRNVFLFNPQRVS 579

Query: 123 ---------------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
                                V   + P      S + A +R+ +       G+ ++V+ 
Sbjct: 580 FTDRAGGDATTPVEAVKTWKGVRLSASPGRINPASPAWADSRKPLVGEFVFRGEPVFVIG 639

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKI 215
            H  S      L   Y      S +   QQA  +  ++T   ++      V  GDFN   
Sbjct: 640 NHFASKGGDQPLHGRYQEPTRSSETKRIQQAAEVNTFVTAVLKADRSAKVVALGDFNDFE 699

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                                      S   +     N   +D+ +              
Sbjct: 700 FSPT----MKTLTRGRALKPLITTLPPSERYSYVFDGNSQTLDHILTSPGVR-------- 747

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                          + SDH P  +  
Sbjct: 748 RPDYDVVHINAEFADQASDHDPQVVRI 774


>gi|184199810|ref|YP_001854017.1| exodeoxyribonuclease III [Kocuria rhizophila DC2201]
 gi|183580040|dbj|BAG28511.1| exodeoxyribonuclease III [Kocuria rhizophila DC2201]
          Length = 268

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 80/309 (25%), Gaps = 70/309 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +    D D++ +QE  + +     
Sbjct: 1   MRIATWNVN----------------SIRARADRIEAWLDRSDVDVLAIQETKAKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       +       +    +A+  +      Q       + +F + G  
Sbjct: 41  ------NFPWELFEFAGYEVAHFGVNQWNGVAIASRVGLTDVQRT--FPDQPTFGKPGQE 92

Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KE 200
            A E   +      + V  +++ +   LD     Y        +  + L+    Q   ++
Sbjct: 93  PAQEARAIGATCGGVRVWSLYVPNGRGLDDPHMPYK------LEWLRVLEGHAKQWLQED 146

Query: 201 SLVPFVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSLIRFPKEKDS 243
                 + GD+N                             +     +       + +  
Sbjct: 147 PDAQIALVGDWNVAPQDDDVWDIQLFKEGGYTHVSEPERAAFHAFIEDAGYQDVVRPRHP 206

Query: 244 RCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     K           ID+ +        +            D  + +GK  SD
Sbjct: 207 GPGVYTYWDYKQLRFPKKEGMRIDFQLCSPALAARVQDAWI-------DRDERKGKGASD 259

Query: 295 HCPISIDYD 303
           H P+ I+ D
Sbjct: 260 HAPVVIEID 268


>gi|149374747|ref|ZP_01892520.1| exonuclease III [Marinobacter algicola DG893]
 gi|149360636|gb|EDM49087.1| exonuclease III [Marinobacter algicola DG893]
          Length = 270

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/286 (11%), Positives = 69/286 (24%), Gaps = 63/286 (22%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
            +    L     +L+ D + LQE  +           +  + + +               
Sbjct: 12  RTRLHQLEAVIDSLNPDFIGLQETKVTDEEFPEDAIRELGYHVHFH------------GQ 59

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
             H  +A+  +      Q       + S      RR +     +NG+K+ V++       
Sbjct: 60  KTHYGVALLSRQAPDSVQKGYPWDGEGS-----QRRLITGHFTVNGRKLTVIN-----GY 109

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---------- 218
           F       +        +    L  ++ + K +    V+ GD N                
Sbjct: 110 FPQGESRDHPVKFPAKEKFYADLMRYLDELKAANGEIVVMGDMNISPTDQDIGIGADNAK 169

Query: 219 -----------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------P 256
                          ++   ++       F        +       +             
Sbjct: 170 RWLRTGKCSFLPEEREWLGQVESRGFTDVFRHLHPEESDTFSWFDYRSKGFDRDPRRGLR 229

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID  +          +                 +R SDHCP+   +
Sbjct: 230 IDLIMASDPLLPKAEEAGV-------SYDIRAMERPSDHCPVWARF 268


>gi|254420197|ref|ZP_05033921.1| exodeoxyribonuclease III [Brevundimonas sp. BAL3]
 gi|196186374|gb|EDX81350.1| exodeoxyribonuclease III [Brevundimonas sp. BAL3]
          Length = 265

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 76/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  + +    D+   QE+   +     
Sbjct: 1   MRIATWNVN----------------SVNARLPTVLAWLEQAAPDVACFQEIKCVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++        +  +A+  K      +        D  +R    
Sbjct: 41  ------KFPREAFESLGYNVETHGQKSYNGVALLSKYPLSDIRRGLPGDETDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E ++E   + + V  I+L +   + + +  Y  +        + L            
Sbjct: 92  --LEAVIEAP-RPLRVASIYLPNGNPIGTEKFDYKLA------WFERLNRHARDLLAFEE 142

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P  + GD+N                           ++ +          +         
Sbjct: 143 PLALCGDYNVIPEAEDAKNPAAWTDDALFQPQSRQAFRALKNLGLAD-SHEVGGEPAGTY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L                    + SDH P+ 
Sbjct: 202 SFWDYQAGAWQRNHGIRIDFALLSPQAADRLRGV-------ETHRDARDMDKPSDHVPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDID 258


>gi|302131242|ref|ZP_07257232.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
          Length = 382

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 103/343 (30%), Gaps = 75/343 (21%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C+ +V        Q +++++WNI  L+                  + + +    +
Sbjct: 52  LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   +A ++P +T   ++  E + 
Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171

Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156
             H        + T       +   LQ   P+  A     +   + A+ +      +G K
Sbjct: 172 SPHIWGSVGRKLTTLSRFHIDSAERLQLPVPVPDANIISRQFQPKNALLVSYLPLRDGGK 231

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI- 215
           + V++ HL +    D              +Q    ++ + + +    P++I GDFN    
Sbjct: 232 LAVINTHLATAKPGDG----------TAHEQIAATENLLDKLEGGGTPWLIGGDFNLLPL 281

Query: 216 -----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPI------ 257
                      +    + +     +    +    +   +  +    +  N   I      
Sbjct: 282 GQYQRLPEQQRHGYAADSELHALWEKYPMIPNNTESSGTDRSQWLTHFPNASRINGPDRT 341

Query: 258 -DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            DY     +  +     S           +     +SDH P+ 
Sbjct: 342 VDYLFYSPSLKR----VSARV-------RRDDTLLISDHLPVI 373


>gi|167581292|ref|ZP_02374166.1| exodeoxyribonuclease III [Burkholderia thailandensis TXDOH]
          Length = 258

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 84/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ +WN+N+L+                     +  +    D D++ LQE  +       
Sbjct: 1   MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQELKIPDEKFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      +  +++ ++  N            AI  R             +     F    
Sbjct: 45  EALEAAGYRSWFAGQKTYN----------GVAILARASLPFDETDVVRNIPG---FEDTQ 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +   ++     + ++  +  +   LDS +  Y        Q    L+ W+  + + 
Sbjct: 92  QR-LIAATID----GVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLKNELQR 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNA 247
                + GD+N        +D         + P +                +  D     
Sbjct: 141 YPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVDAFRRFDQPEKT 200

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++     +     +        D      ++ SDH P+
Sbjct: 201 FTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRAPRAWEQPSDHTPV 253

Query: 299 SIDY 302
               
Sbjct: 254 VAQL 257


>gi|72383653|ref|YP_293008.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL2A]
 gi|72003503|gb|AAZ59305.1| Exodeoxyribonuclease III [Prochlorococcus marinus str. NATL2A]
          Length = 275

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 86/302 (28%), Gaps = 63/302 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   S    ++++      DI+ LQE  + +       
Sbjct: 3   VATWNVN----------------SIRSRIDHVKEWLITNKIDILCLQETKTEDKF----- 41

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                        + +    S    +  +A+  +      +        D    +     
Sbjct: 42  -----FPIEIFSDLGYEVSISGQKSYNGVAIISRFPINDIKIGFNEVTNDYQDLSILSEQ 96

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
             + +  +   I ++++++ +   ++S +  Y           + L+ ++ +  ++  P 
Sbjct: 97  KRI-ISADINDIRIINVYVPNGSSINSDKFIYKKK------WLKCLQVYLREINKNNTPI 149

Query: 206 VIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANKNL 251
            + GDFN        +                + +       L    +  +         
Sbjct: 150 CLLGDFNIAPEDRDIHTPSRYEESIMASSKERELLKDALGGELEDVFRIFEPGEKNWSWW 209

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+  + ++                 D  +   ++ SDH P+ +D 
Sbjct: 210 DYRHSAWERDKGWRIDHIYLTEDILSCANSCWI-------DKEQRSREKPSDHAPVVVDI 262

Query: 303 DF 304
           ++
Sbjct: 263 NW 264


>gi|238027065|ref|YP_002911296.1| endonuclease/exonuclease/phosphatase [Burkholderia glumae BGR1]
 gi|237876259|gb|ACR28592.1| Endonuclease/exonuclease/phosphatase [Burkholderia glumae BGR1]
          Length = 285

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 84/306 (27%), Gaps = 50/306 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +RL+ WNI    +  G       + RT +    L  +      D+  +QE+         
Sbjct: 1   MRLIDWNIQWGRDASGRVE----LARTVAQARALADF------DVWCVQELTRGFAALPG 50

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +  A++              +                A+  +        + L   
Sbjct: 51  GPGPDQFAELAALLPGYTVIEAIAVDLPPAAGGVARRQFGNAIATRLPVGRVLRHMLPWP 110

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ + +  R A+E+ +   G  + ++  HL+ +    +       +     ++A     
Sbjct: 111 AEAGTPSMPRIALEVNLCGAGGPLRIVTTHLEFYSA--AQRLAQVDALREQHREAAGHAH 168

Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                +    PF         ++ GDFN                   D +  + +    +
Sbjct: 169 RPAPAETPDGPFAGSARALDAIVCGDFNSAYRDDAYRRITAPIAGAPDLVDAWVQAHPGQ 228

Query: 245 CNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                             +  D+  +     K +++                  R SDH 
Sbjct: 229 TPPPTAGVYDTEQWQDGAMTCDFVFVTDTLAKRIVRCEI-----------DGATRASDHQ 277

Query: 297 PISIDY 302
           PI ++ 
Sbjct: 278 PILLEL 283


>gi|73538157|ref|YP_298524.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
 gi|72121494|gb|AAZ63680.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
          Length = 653

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 99/323 (30%), Gaps = 48/323 (14%)

Query: 19  SVAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVF 70
           +    VR+ ++N+    N   +  G +   N   R T+++      L      LDAD++ 
Sbjct: 284 TGGTDVRVAAFNVLNYFNGNGQGGGFNAPDNRGARNTAEFDRQEAKLLAALHALDADVIG 343

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYP 129
           L E+ +         +    +     R ++        D I  A+   ++ V+      P
Sbjct: 344 LMEVENNGYGPHSAVQRLAALMGPGWRAVDPGTPRLGTDAIAVALLYNQRAVK------P 397

Query: 130 LLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSP------S 180
           +     +     NR+ +    ++ G   +   V+  HLKS    D+              
Sbjct: 398 VGMPATTVLDMRNRQPLAQTFQLIGNLSQTFTVVVNHLKSKGCADADGTDRDQGDGQGCW 457

Query: 181 CSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            +  S+ A+ L DW+       +    ++ GD N   +           +          
Sbjct: 458 NATRSRAARALADWLGTSPTGVANAGKLVIGDLNSYASEDP-----LTVLAREGYEDIVA 512

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------- 288
           +                 +DY + D      +   S   +  +E    +           
Sbjct: 513 RFAGRDAYTYVFDGRAGYLDYALADAALVPRIRAVSIWHVNADEPVAFAYAQAYRNAAQQ 572

Query: 289 -------GKRLSDHCPISIDYDF 304
                    R SDH P+ +D  +
Sbjct: 573 ERYYAPDAWRASDHDPVLVDLSW 595


>gi|269966663|ref|ZP_06180742.1| hypothetical protein VMC_21720 [Vibrio alginolyticus 40B]
 gi|269828730|gb|EEZ82985.1| hypothetical protein VMC_21720 [Vibrio alginolyticus 40B]
          Length = 320

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 30/315 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            T S   ++  V+ N+                 S+++     +  ++  + L+ D++ LQ
Sbjct: 2   NTLSQPSRITFVTANLFNFVAPPNAYYDFENIYSLEQWRDKLSWTQRQVEKLEGDVIGLQ 61

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--- 129
           E+ S       F    +  +++T    +       +    AIA R    +V    +    
Sbjct: 62  EVFSIEETQAFFSTIGYP-YFATVDTPHVEDEYIYSSPVVAIASRFPIEKVQAVEFDLAT 120

Query: 130 LLGAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENT-------YSPSC 181
           L     S     +R+ +   ++      I V   HLKS    DS +            S 
Sbjct: 121 LEPFGVSVVPEFSRKPIYAQVIHPVLGHIAVYVTHLKSQRPADSEQPETSSTIIGRWLST 180

Query: 182 SLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------ND 232
                +A  L+D +  + ++  +P V+ GD N+ I  +  N                 + 
Sbjct: 181 QQRGWEAAMLRDAMQKRYRKEPMPTVLMGDMNQPITPISVNSALVSNTGDSVTELQLKDG 240

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------ 286
            L++    KD R   + +      +DY ++ Q             + Y   +        
Sbjct: 241 WLLQSAPLKDERPATHYHFSTGNVLDYILLSQEFDTLSDISVAEVVDYQVSNQHLINPIY 300

Query: 287 SRGKRLSDHCPISID 301
            R K  SDH  +++ 
Sbjct: 301 DRDKNASDHAFVALT 315


>gi|317478865|ref|ZP_07938015.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|316904947|gb|EFV26751.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 361

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 62/305 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               + +++ ++NI+               + T      + +Y +    D++  QE G  
Sbjct: 98  TPAGKYLKIATYNIHNFGG-----------EITGYSCKEIARYMQQEGVDVLCFQEFGDN 146

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +     FP ++     S          DS         V+      +   YPL   +   
Sbjct: 147 SD----FPTDSIRRVLSHWSHALIPSEDS---------VKGVLPIAVFSRYPLANHRFIT 193

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQA------ 188
            +  +  ++   V +    I +++ HL++                  +    QA      
Sbjct: 194 YQHSSNCSMICDVVMGTDTIRLINNHLQTTSVSQKRRKWERELATDDTRREVQAAKDAAG 253

Query: 189 --------QWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   +  + ++          P ++ GDFN   +    +    KT+        F 
Sbjct: 254 TLHENFMKRATQTYVISHYAKTSPYPVLLCGDFNSIPSSYTYHH-LRKTLKDG-----FR 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +      +  +  + IDY     +                 +         SDH P+
Sbjct: 308 TAGNGYMYTYRYAKRMLRIDYIFHSPSLK-------------GIEYYSPDLDLCSDHNPV 354

Query: 299 SIDYD 303
            ++ +
Sbjct: 355 IMEVE 359


>gi|294668724|ref|ZP_06733817.1| endonuclease/exonuclease/phosphatase family protein [Neisseria
           elongata subsp. glycolytica ATCC 29315]
 gi|291309241|gb|EFE50484.1| endonuclease/exonuclease/phosphatase family protein [Neisseria
           elongata subsp. glycolytica ATCC 29315]
          Length = 250

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 87/287 (30%), Gaps = 48/287 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + + + ++NI+             S        + + Q  ++L  DI+FLQE+   N +
Sbjct: 2   TEPITIATYNIH----------KGMSPLNRKVQISDMAQALESLKPDILFLQEVQGQNLL 51

Query: 81  AKV----FPKNTWCIFYSTE--RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            ++    FP        +       ++ K       H   A+  +    ++Q+  +    
Sbjct: 52  RELKLPDFPARPQDNIIADHLAYYTSYGKNAVFPQKHHGNAILSRLPMQMRQNVNI---- 107

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S +R   R  +   +  +G ++ ++ +                       +Q   + ++
Sbjct: 108 -SVNRLEKRGVLHCEILPDGWEMPIVCLCAHLNLL-----------ERDRVKQYVAIFEY 155

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +T       P ++AGDFN        +               F                 
Sbjct: 156 VTTYIPPEAPLILAGDFND-----WRHKSTLNIGSTLGLTEVFLDRHGELPKTFPARMPV 210

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           + +D                  +IL      +   + LSDH P+S  
Sbjct: 211 LSLDRIYTRN-----------LDILNATLHSEEPWQYLSDHLPLSAT 246


>gi|161522526|ref|YP_001585455.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC
           17616]
 gi|189348598|ref|YP_001941794.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616]
 gi|221211889|ref|ZP_03584867.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD1]
 gi|160346079|gb|ABX19163.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC
           17616]
 gi|189338736|dbj|BAG47804.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616]
 gi|221167974|gb|EEE00443.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD1]
          Length = 278

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 76/280 (27%), Gaps = 56/280 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +R+ ++NI+                        +      LDAD++ LQE+      
Sbjct: 26  GRDLRIATYNIHG-----------GHGPWHARAVDRIAAVIDELDADVIALQEVPLGGTR 74

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A                           +     AV  +      ++  L     SF + 
Sbjct: 75  APDVLAPLRDATGMHVAAGPTIDTA---ERRYGNAVLSRYPIRAARTLDL-----SFHQR 126

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A++  ++     + V+  HL               S    S Q Q L   +     
Sbjct: 127 EPRGALDADIDCRTGPLRVVATHLGL-------------SARERSAQVQRL---LAAFDT 170

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             +P ++ GD N         + F +       + RF +    R            +D  
Sbjct: 171 GAMPVILLGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTVCPLFS--LDRI 219

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +               ++       +R +  SDH P+  
Sbjct: 220 WVHPG----------ELLVDVVVHRSARARHASDHYPLVA 249


>gi|150017217|ref|YP_001309471.1| exodeoxyribonuclease III Xth [Clostridium beijerinckii NCIMB 8052]
 gi|149903682|gb|ABR34515.1| exodeoxyribonuclease III Xth [Clostridium beijerinckii NCIMB 8052]
          Length = 254

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L                        +Y K +DADI  +QE           
Sbjct: 5   KLISWNVNGLRACVKKGF---------------LEYFKEIDADIFCIQESKLQEG-QIDL 48

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
             + +  +++      +          +  AV  K   +  +    +   D+  R     
Sbjct: 49  ELDGYTSYWNYAEKKGY----------SGTAVFTKEEPLTVKRGIGIEEHDNEGR----- 93

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +     ++++++  +        +       +  +  + L+           P
Sbjct: 94  ----VLTLEYGNFYLVNVYTPNSKQGLERLDYRMVWEDVFRKYLKELEK--------NKP 141

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +I GD N                              +     +  +      +     
Sbjct: 142 VIICGDLNVAHKEIDLKNPTSNRKNAGFTDEERSKISELLEAGFIDTYRYFYPDKEGMYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ ++    L                      SDHCP+ +
Sbjct: 202 WWSYRFNARANNAGWRIDYFLVSESLKDKLEDAKIH-----------MEVTGSDHCPVEL 250

Query: 301 DYD 303
             +
Sbjct: 251 TIN 253


>gi|86605184|ref|YP_473947.1| exodeoxyribonuclease III [Synechococcus sp. JA-3-3Ab]
 gi|86553726|gb|ABC98684.1| exodeoxyribonuclease III [Synechococcus sp. JA-3-3Ab]
          Length = 261

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 78/301 (25%), Gaps = 68/301 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84
           + +WN+N                   +    +  +     + D++ LQE    +A     
Sbjct: 3   VATWNVN----------------SIRTRLPQVLAWLDKQGSLDVLCLQETKVVDA----- 41

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                    +                +  +A+  + V    +         +      +R
Sbjct: 42  -----EFPRAPFEERGFHVEVYGQKAYNGVALISREVPEKVERGFAALLPAAAELDEQKR 96

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +    + I +L++++ +   + S +  Y        +    LKD++    +   P
Sbjct: 97  L----IGGLYRGIRILNLYVPNGEAVGSDKYAYK------LRWLACLKDYLQVALDQGQP 146

Query: 205 FVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNANKN 250
            ++ GDFN         D                 + I        F K      +    
Sbjct: 147 ILLCGDFNIAPEDRDIYDPGKAGEIMASEPERQALQKILALGFEDAFRKFNPDPGH-FSW 205

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           ID+  +                         R ++ SDH P+ ++
Sbjct: 206 WDYRGGGFQKNRGWRIDHLYLSPLLQDKATACWIDVE-------PRRAEKPSDHAPVVVE 258

Query: 302 Y 302
            
Sbjct: 259 L 259


>gi|118594091|ref|ZP_01551438.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth
           [Methylophilales bacterium HTCC2181]
 gi|118439869|gb|EAV46496.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth
           [Methylophilales bacterium HTCC2181]
          Length = 260

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 67/301 (22%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ +WN+N+L+                     +  + K  + DI+ LQE    N      
Sbjct: 3   KIATWNVNSLN----------------VRLEHVIDWVKIHNPDILCLQETKQTND----- 41

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   +     I +    +    +  +A+                    FS    R 
Sbjct: 42  -----KFSHEAFDSIGYKSYHNGQKTYNGVAIISNKELQNVG-----SDIPGFSDPQKRI 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              L    +   I V+  ++ +   LDS +  Y  S        +    W+         
Sbjct: 92  IHGLYPSRSLGLIHVVSAYVPNGQSLDSEKFKYKVS------WLEAFNTWVKSSYGKSDH 145

Query: 205 FVIAGDFNRKINYLGNND---DFWKTIDPNDSLIRFPKEKDSRCNA-----------NKN 250
            ++ GDFN     +  +D        +        F    D   +               
Sbjct: 146 HILTGDFNIAPRDIDCHDPEAWKGNILVSQIERDLFDAIIDIGFDDSFRVLNKDIQKFSW 205

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ++          ID+ +   +  + L            D+   + +R SDH P+  +
Sbjct: 206 WDYRMAGFRRNLGMRIDHILTSHSLKENLTTAYI-------DEDPRKLERPSDHTPVITE 258

Query: 302 Y 302
           +
Sbjct: 259 F 259


>gi|295395722|ref|ZP_06805913.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971422|gb|EFG47306.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030]
          Length = 261

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 82/303 (27%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+V+WN+N                   +    +  +    D D++ +QE+   +A    
Sbjct: 1   MRIVTWNVN----------------SVRARAERIGAFLDRSDVDVLAIQELKCKDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGN 142
                            +       +    +AV  +      +  +  +       +   
Sbjct: 41  ------QFPAHVFEDRGYEVAFHGLNQWNGVAVASRVGLDDVEVGFEGVPGFGDDDQVEA 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +        +    +++ +   LD     Y        +    L++    + E  
Sbjct: 95  RAISAVT-----GGVRTYSLYVPNGRELDHPHYAYK------LEWLAQLRNEALVRLEQD 143

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           VPFV+ GDFN                  +      D +  +          +        
Sbjct: 144 VPFVMCGDFNVAPLDEDVWDMAAFEGATHVSQPERDAFNGLISAGLTEVTRQFTPGPGVY 203

Query: 248 NKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                          + ID+ +   +  +              D  + +GK  SDH P+ 
Sbjct: 204 TFWDYQQLRFPKKQGMRIDFQLASPSLAERATGAFI-------DREERKGKGASDHAPVW 256

Query: 300 IDY 302
           +DY
Sbjct: 257 VDY 259


>gi|163851383|ref|YP_001639426.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1]
 gi|163662988|gb|ABY30355.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1]
          Length = 264

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 81/303 (26%), Gaps = 64/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  +      D+V LQE+   +A    
Sbjct: 1   MRITTWNVN----------------SIKQRVGHLLGFLDEAKPDVVCLQELKCQDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++        +  +A+  +    LQ +  L G          R
Sbjct: 41  ------SFPREEIEAAGYAVETLGQKAYNGVALLVRAP--LQYTQLLRGLPGDAEDEQAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L+       + V  I+L +       + +Y  +          L+        +  
Sbjct: 93  YIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMAR------LRSHARALMTTEE 146

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+AGDFN                           F   +    +      E  +    
Sbjct: 147 ALVLAGDFNVIPEPEDAADPTVWTQDALFLPETRRAFRALLAEGFTDGLRACEPSAGLYT 206

Query: 248 NK------NLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                     RN+   ID+ ++   A   L+  S               ++ SDH P+++
Sbjct: 207 FWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSASVQRH-------LRGLEKPSDHVPVTV 259

Query: 301 DYD 303
           +  
Sbjct: 260 ELS 262


>gi|42525008|ref|NP_970388.1| exodeoxyribonuclease [Bdellovibrio bacteriovorus HD100]
 gi|39577219|emb|CAE81042.1| exodeoxyribonuclease [Bdellovibrio bacteriovorus HD100]
          Length = 257

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 92/305 (30%), Gaps = 76/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++++SWN+N L                       R++ +   ADIV LQE+  +  A+ K
Sbjct: 1   MKMISWNVNGLRS---------------VHRKNFREWFEKEKADIVCLQEIKITDEAIKK 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    ++S+          +    ++ +A+  K      +    +   D   R   
Sbjct: 46  DEEFYHPAKYHSSWA-------FAEKAGYSGLALYSKKEPDDVRIGLGIPKFDIEGRW-- 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +E +   I V++ +  +     +        C+   ++ Q L+          
Sbjct: 97  -------LEADFGPITVVNSYWPNSQREHTRLPFKLEFCAAAEKRLQALRK-------KG 142

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              +I GDFN                             + +D  + +  F K +    +
Sbjct: 143 REVIICGDFNIAHKEIDLRNPKTNMKNAGFLPEERAWMTRFLDKLEWVDSFRKFEQGPEH 202

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           +DYF++++ A   L   S                  SDHCP
Sbjct: 203 -YTWWSYRPGVREKNIGWRLDYFLVNKEASDRLKAASHC-----------PDVMGSDHCP 250

Query: 298 ISIDY 302
           + +  
Sbjct: 251 VRLTL 255


>gi|294011035|ref|YP_003544495.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S]
 gi|292674365|dbj|BAI95883.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S]
          Length = 248

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 74/285 (25%), Gaps = 55/285 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              + VR+ S+NI      +   +              +      LDADI+ LQE     
Sbjct: 15  FAMKTVRVASYNIRKAIGTDRRRVP-----------ERVIDVLNELDADIIALQEADRRF 63

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            V +      W +   +           ++      A+  +    +     L        
Sbjct: 64  GV-RSAALPPWLLESISPYRPVPLNVHVDSMGWHGNAILVRKEAEVGAHDVL-----HLP 117

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R A    V +    + V  +HL               S     +QA  +       
Sbjct: 118 CLEPRGATMAEVTLGKASLRVFGMHLDL-------------SGLWRRKQAAAV--IHAAS 162

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNKIPI 257
               +P V+ GD N                +             + C  +    R    +
Sbjct: 163 SRDAMPTVLMGDLNEWSA------------ERGCLADFARHYSFAPCGRSFHARRPVARL 210

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D  +        L+     E         +  ++ SDH PI  ++
Sbjct: 211 DRIMHCGRL--KLVDCGVHE--------SAAARKASDHLPIWAEF 245


>gi|259047804|ref|ZP_05738205.1| exodeoxyribonuclease III [Granulicatella adiacens ATCC 49175]
 gi|259035481|gb|EEW36736.1| exodeoxyribonuclease III [Granulicatella adiacens ATCC 49175]
          Length = 254

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N                R+  +   L++Y    + DI+ LQE  +     ++
Sbjct: 1   MKLATWNVNG--------------IRSVLNKGALQEYVLESNPDILCLQETKAQQDQVEL 46

Query: 84  -FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               + + +F+++     +          +  A+  K   +  +    +   D   R   
Sbjct: 47  GMEFSEYEVFFNSAVKKGY----------SGTAIFTKEKPLSVEYGIGIEEHDQEGR--- 93

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++    +K +++ ++  +     S                + L++         
Sbjct: 94  ------VITAEYEKFYLVTVYTPNAKRDLSRLEYRQVWEDDFLAFIKKLEE--------T 139

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +  GD N                           +  +  ND +  F         A
Sbjct: 140 KPVIFCGDLNVAHKEIDLANPKTNTMNAGFTKEERAKFDQVVNNDLVDAFRYLYPDTLGA 199

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDYFV+ Q    FL +                    SDHCP+
Sbjct: 200 YSWWSYMGGARARNVGWRIDYFVISQPLTAFLQEVKIR-----------SDVTGSDHCPV 248

Query: 299 SIDYD 303
            +  +
Sbjct: 249 EMKIE 253


>gi|261821654|ref|YP_003259760.1| endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae
           WPP163]
 gi|261605667|gb|ACX88153.1| Endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae
           WPP163]
          Length = 300

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/290 (11%), Positives = 80/290 (27%), Gaps = 45/290 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A ++++ ++NI                     D   + +    LD DI+ L+E+      
Sbjct: 43  APQLKIANYNIAGGLRN------------HKVDLNKVAKAINALDPDIIALEEVDQKTTR 90

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +    +       +     ++      +  +   A+  K      + + L          
Sbjct: 91  SDGIDQIKELAKLTKMYF-SYGVAIQAHGGNYGNAILSKYPIEKTKVFKLPSG-----DY 144

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  +   + I G    V   +             +     +   QA+++   +    +
Sbjct: 145 EQRSLMLSKINIPGFDSPVYIYNTHF---------DWHEEDEVRMSQARFINSIVFDDLD 195

Query: 201 SLVP--------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                       F++AGDFN   N         + +   +      +             
Sbjct: 196 LDKDFPNLATGIFILAGDFNSTKND--------RVVKELNKYWNLVEVAGKDTRTWPAGN 247

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + +D+    +     + + +        ++   + +  SDH PI    
Sbjct: 248 PGLDLDHIFTGKGQKWKIEKLTIPNDG--SEEFGIKWQTTSDHIPIMATL 295


>gi|115352233|ref|YP_774072.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria AMMD]
 gi|115282221|gb|ABI87738.1| Exodeoxyribonuclease III [Burkholderia ambifaria AMMD]
          Length = 271

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/300 (10%), Positives = 81/300 (27%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +  +   D++ LQE          
Sbjct: 14  MKIATWNVNSLN----------------VRKQHVLDWIAHSGTDVLCLQE---------- 47

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    I +    +    +  +A+  ++   + +S  +             
Sbjct: 48  LKLPDEKYPRADLEAIGYRSWFTGQRTYNGVAILARDTLAVDESDIVRNIPGFDDPQQRV 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV +        + ++  +  +    +S +  Y        Q    L  W++ + +   
Sbjct: 108 IAVTVE------GVRIVSAYFPNGQSPESDKFVYK------MQWLDALHAWLSAEMQRYP 155

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 156 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDAFRRFEQPEKTFT 215

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D +    ++ SDH P+  
Sbjct: 216 WWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEV-------DRLPRTWEQPSDHTPVVA 268


>gi|190891414|ref|YP_001977956.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
 gi|218516597|ref|ZP_03513437.1| exodeoxyribonuclease III protein [Rhizobium etli 8C-3]
 gi|190696693|gb|ACE90778.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
          Length = 263

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 76/303 (25%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ K    D+V LQE+ + +A    
Sbjct: 1   MKIATYNVNGING----------------RLDILLRWLKEDAPDVVCLQELKTDDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  K    +     L G  D      +R
Sbjct: 41  ------KFPRTETERAGYGAVWHGQRSWNGVAILAKGKTPILTRRGLPGDPDDTH---SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       +           F  +           LS  A  L +         V
Sbjct: 92  YIEAAV----DGMLIGCLYLPNGNPFPSAKFEYKLRWFRRLSAYAAELLEI-------EV 140

Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P ++AGDFN                  +   +                 +          
Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRNAYAQLVAQGWTDAVRHLHPGERIYT 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +             ID+ ++      +L   S               +  SDH P+ I
Sbjct: 201 FWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSASVR-------RKPRGWEHTSDHAPVVI 253

Query: 301 DYD 303
           + D
Sbjct: 254 ELD 256


>gi|325285170|ref|YP_004260960.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
 gi|324320624|gb|ADY28089.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
          Length = 344

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 97/325 (29%), Gaps = 75/325 (23%)

Query: 3   RKYVLALVFFLVPCTASVA-------------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           ++ +L+ +   +      +               + ++++N    ++ E  S        
Sbjct: 66  KRILLSALVLFLGYFLVDSFIKFNFSTEKNNETSLTVMTYNTRGFNKYEWSS-------- 117

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
             +    +  +    D DI+ +QE                   +S  R      R   N 
Sbjct: 118 DKALGDKIIDFVLKEDPDIICIQE-------------------FSRVRYHQLKHRYKYNY 158

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           +     V  K  + +   YP+L   +   +  N  A    +      I V ++HL+S   
Sbjct: 159 VAPGFYVN-KVNQAIYSKYPILNTGELPFKLTNNIASFADIAYKNDTIRVYNLHLESLKV 217

Query: 170 LDSL-----------ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           +  +               + S      QA+ +++ I     +    ++ GDFN      
Sbjct: 218 VPDMETISNEESSKLYGRITKSFKKQQDQAKIVQEHIK---GNPYKTIVCGDFNNNQYSN 274

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                    +D       F ++  +           + ID+ +  +              
Sbjct: 275 VYRTIKGDLLD------TFNEKGSAYGRTYNFKYYPVRIDFILASKE------------- 315

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
            +     K+   +LSDH P+   ++
Sbjct: 316 -FEVIAHKNYDNKLSDHFPVMASFN 339


>gi|240138546|ref|YP_002963018.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens AM1]
 gi|240008515|gb|ACS39741.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens AM1]
          Length = 264

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 81/303 (26%), Gaps = 64/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  +      D+V LQE+   +A    
Sbjct: 1   MRITTWNVN----------------SIKQRVGHLLGFLDEAKPDVVCLQELKCQDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++        +  +A+  +    LQ +  L G          R
Sbjct: 41  ------SFPREEIEAAGYAVETLGQKAYNGVALLVRAP--LQYTQLLRGLPGDAEDEQAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L+       + V  I+L +       + +Y  +          L+        +  
Sbjct: 93  YIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMAR------LRSHARALMTTEE 146

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+AGDFN                           F   +    +      E  +    
Sbjct: 147 ALVLAGDFNVIPEPEDAADPSVWTQDALFLPETRRAFRALLAEGFTDGLRACEPSAGLYT 206

Query: 248 NK------NLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                     RN+   ID+ ++   A   L+  S               ++ SDH P+++
Sbjct: 207 FWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSASVQRH-------LRGLEKPSDHVPVTV 259

Query: 301 DYD 303
           +  
Sbjct: 260 ELS 262


>gi|329850002|ref|ZP_08264848.1| hemolysin-type calcium-binding repeat 2 copies family protein
            [Asticcacaulis biprosthecum C19]
 gi|328841913|gb|EGF91483.1| hemolysin-type calcium-binding repeat 2 copies family protein
            [Asticcacaulis biprosthecum C19]
          Length = 2058

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/359 (10%), Positives = 80/359 (22%), Gaps = 80/359 (22%)

Query: 14   VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFL 71
            V      A+ +R+ ++N+  L                 + +  + +   +  L  DI+ +
Sbjct: 1212 VTTLTHDARSLRVSTFNVENLGGNAD-----------QARFDAIAEAIADNLLSPDIICI 1260

Query: 72   QEMGSYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            +E+   N                      +    T+        +          +I   
Sbjct: 1261 EEVQDNNGTTNDGTVDASTTWQRIVDAVNLATGKTYQWV-DELPVNGAEGGAPGGNIRVG 1319

Query: 114  IAVRKKNV------------------------RVLQQSYPLLGAKD----SFSRAGNRRA 145
                   V                                     D    +      R++
Sbjct: 1320 FLYDTARVQLGNLAADATIEERRAYTDRIGDGVRDSGDLIAFSDADVAITTADWTTTRKS 1379

Query: 146  VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---------SCSLLSQQAQWLKDWIT 196
            +      NG  ++V   H  S    D+                  +  ++ A+ +   + 
Sbjct: 1380 LLAEFTFNGNTVYVTANHFPSKGGSDNFWELDQNNSNGNPTNSDWAQRNEVAEDVWSVLD 1439

Query: 197  QKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLI---------RFPKEKDSRC 245
               +  +    +  GDFN    Y               +              +      
Sbjct: 1440 YIADHDLDARLIEGGDFNDFYFYRPLQVATGSVDADGVTRDPSETRLVNLTVSELAPGER 1499

Query: 246  NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       ID+ + D+        +             +    +SDH P    +DF
Sbjct: 1500 YTYAFDGRSQAIDHILSDEELAAVADYDVVHLNTGYSGRTGATNPAISDHDPTLARFDF 1558


>gi|329959923|ref|ZP_08298454.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328533220|gb|EGF59985.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 337

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/341 (10%), Positives = 90/341 (26%), Gaps = 57/341 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46
           M + ++L   +  +    +   +     +  +N+  L +    +   +           +
Sbjct: 1   MKKLFILFSFWLCIATLGAQNTERELYSVAFYNLENLFDTIHDAGKNDYEFLPDGSYHWT 60

Query: 47  VKRTTSDYTLLRQYAKNL-------DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
            K+  +    L +    L           + + E+ + N +  +  +     +       
Sbjct: 61  AKKYEAKLQNLSRVLGALSKELVPEGPAFIGVAEVENRNVLVDLVKQPAISKYEFVHYEG 120

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
              +      I  A+       RV      L    +  +    R  + +  E+ G+++ V
Sbjct: 121 PDKR-----GIDCALLYDPDQFRVTASKLVLSTPFEGDTVHLTRGFLIVDGELAGERVCV 175

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S      +           ++Q + LKD +   ++  +  ++ GD N       
Sbjct: 176 IVNHWPSRGAKTPVRV-------HAARQVKALKDSL-MCQDKKLKLIVMGDMNDDPMDES 227

Query: 220 NNDDFWKTI-----DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----- 269
             +   +               +   +D               D  V+ +   K      
Sbjct: 228 MKELGARKYIKEVKKGEFYNPWWETLEDKGVGTLLYRGKWNLFDQIVISKPLLKAKRGLR 287

Query: 270 -------------LIQESFSEILYNEDDIKSRGKRLSDHCP 297
                             +          ++     SDH P
Sbjct: 288 YDHNEVFIRDYLIQQDGKYKGSPLRTHGGRTWLNGYSDHLP 328


>gi|297192706|ref|ZP_06910104.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297151462|gb|EFH31179.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 401

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 74/287 (25%), Gaps = 43/287 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+++WN            + +    T     LL    +  DAD++ LQE+     V
Sbjct: 114 AGSLRVLTWNTLW-------DRYDSDRIATAVRRPLLIDALREADADVIALQEVEPELLV 166

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +        +                     + +  +        + L   K      
Sbjct: 167 MLLRTPWVRDAYTVATDPGGRD------VDECGLLLLSRLPVREAGHHALGPHK------ 214

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                  ++VE  G  + V   HL S    D                   L         
Sbjct: 215 ---AVTAIVVESGGGPVTVAATHLTSDHSEDGATRRD-----------AELARIAEGLAG 260

Query: 201 SLVPFVIAGDFNRKINYL----GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                V+ GDFN   +      G  D +       D+   F    +     +        
Sbjct: 261 IDGDVVLMGDFNDGTDAPQTTLGMRDAWSDAHGHGDTTPTFDPGANPLAAVSSLSGRVSR 320

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D  ++  +  +          +   D     G  +SDH  + +   
Sbjct: 321 LDRVLLRSDGLR------VDSAVLRGDVPTPEGLHISDHYGVEVALS 361


>gi|296158362|ref|ZP_06841193.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
 gi|295891306|gb|EFG71093.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
          Length = 258

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  + +    D++ LQE          
Sbjct: 1   MKIATWNVNSL----------------KVRQQHVIDWLETTGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  + +  ++   + +S  +      F     R
Sbjct: 35  LKLPDEKFPRAELAEKGYRSWFAGQKTYNGVGILVRDGLTVDESSIVRNIP-GFEDPQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +E       V+  +  +     + +  Y        +    L DWI  +     
Sbjct: 94  -VIAATIEDT----RVISAYFPNGQAPGTDKFAYK------LRWLAALHDWIASEMALHP 142

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
              + GD+N        +D      + +   +            L+   +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAEFVRLIGLGLVDAFRRFEQPEKIYS 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++ +   +            + D +  +  + SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSKALAEVCSSC-------DIDKVPRKWDQPSDHAPVVA 255

Query: 301 DY 302
             
Sbjct: 256 QL 257


>gi|323530343|ref|YP_004232495.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
 gi|323387345|gb|ADX59435.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
          Length = 258

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 83/284 (29%), Gaps = 56/284 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            +   + +R+V++NI+     +G                 + +    L+AD+V LQE+  
Sbjct: 27  ASHTGEPLRIVTYNIHGAVGTDG-----------RRSAARIAEVITALNADVVALQEVPL 75

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A +    +    +   T             D     AV         ++  L     S
Sbjct: 76  GGAASIDVLRELQDL---TGMHAVPGPTLDGPDRRFGNAVLTNLPVRAVRTLDL-----S 127

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F     R A+++ ++     + ++  HL               S      Q + L   + 
Sbjct: 128 FGSREARGALDVDIDTGNGLMRIVATHLGL-------------SARERRAQVRLL---LE 171

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N    +                  RF +    R   ++       
Sbjct: 172 AFDTPDLPVILLGDLNEWFVWGWPLRALL---------TRFGRVAAPRTFPSRFPAF--A 220

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +D   +   A           ++  + D     +  SDH P+  
Sbjct: 221 LDRVWVHPAAR----------LVDIQVDRSGPARIASDHLPLVA 254


>gi|262383373|ref|ZP_06076509.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262294271|gb|EEY82203.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 246

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 87/308 (28%), Gaps = 67/308 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +++ +  L   L+   + + +    +R++S+NI                    ++   + 
Sbjct: 1   MKRILFLLTIALLNLGSGLCKTRQSLRIMSYNIR-----------IGIGMDQQTNLKRIA 49

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +    +  D V LQE+                   S         + +     T +    
Sbjct: 50  EVINKVQPDYVGLQEVD------------------SVCERSGWINQYAELARLTGM---Y 88

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                  +    L    + SR   R    + +    +    L +   ++   ++  +   
Sbjct: 89  PIFAPATERSKGLYGIAALSRKKPRSYQYIPLPGKEEPRTFLCLEYPNYTLCNTHFSLDP 148

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIR 236
            S      +   ++           P +I GDFN + +          W+ +        
Sbjct: 149 DS------RLASIRLINETMTSENKPILITGDFNMEPDSKEFKAMKQTWRLLSD------ 196

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                        +   ++ +DY   D      +I +   +I            + SDH 
Sbjct: 197 ------PTLETYPSDHPRLRLDYIFGDLKHEFRIINDQVIDI------------QSSDHL 238

Query: 297 PISIDYDF 304
           PI ID  F
Sbjct: 239 PIYIDVLF 246


>gi|325121513|gb|ADY81036.1| putative extracellular nuclease [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 812

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 91/325 (28%), Gaps = 50/325 (15%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K +DAD+  L E+ + 
Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGLMEIANN 520

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +      S  + +      R   + I  AI    K V+ L +   L    D
Sbjct: 521 GYGPNSAIAHLTSALGSDWKYVVPENLDRLGGDAIAVAIIYNSKRVKPLNKPVVL----D 576

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCS-----LLSQQ 187
              +     A         K   V+  HLKS        S  +               + 
Sbjct: 577 LGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDASSTDADQKDGQGCWNPTRVKA 636

Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              +  W+ +          ++ GD N         +        N  ++    +     
Sbjct: 637 VDQIVQWLAKNPTQVPKQNALLVGDMN----SYAKEEPILSFEKANYKVLLNDAKVGQGT 692

Query: 246 NANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
            A                   +D+ + D   Y  +++     I  +E  +          
Sbjct: 693 QAYSYVFGVASDANGNGGAGNLDHAIADAALYPKVVRTFAWHINADEPTVLDYNEEYKTD 752

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +D D
Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777


>gi|312114912|ref|YP_004012508.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100]
 gi|311220041|gb|ADP71409.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100]
          Length = 268

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 75/307 (24%), Gaps = 67/307 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ +WNIN                     + L+ ++ +    DI+ LQE+        
Sbjct: 2   TLRITTWNIN----------------SVRLRFELVARFVRETRPDILCLQEIKCR----- 40

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               + +        L            +  +A   K           L  +        
Sbjct: 41  ----DEFFPLEGFRELGFPHIAICGQPGYHGVATLSKLPLE------PLPRQSFCGTEEA 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     +   +G  + + +I++ +    D  +   +P           L  W     +  
Sbjct: 91  RHLGAKVALPSGGTLALHNIYVPAG--GDIPDPELNPKFKQKLAYLAALAKWERGWTDDA 148

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GDFN                   +     +   K       +    K       
Sbjct: 149 NAVLV-GDFNVAPLETDVWSHKQLLKVVSHTPVEVEALTKVRVDGRWVDLVRKVIPPEEK 207

Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+        +     S                  SDH 
Sbjct: 208 VYSWWSYRARDWAASDRGRRLDHIWGSAAMAERTRAVSV-------LKDARGWPGPSDHV 260

Query: 297 PISIDYD 303
           P+++D++
Sbjct: 261 PVTLDFE 267


>gi|229174398|ref|ZP_04301930.1| Exodeoxyribonuclease [Bacillus cereus MM3]
 gi|228608958|gb|EEK66248.1| Exodeoxyribonuclease [Bacillus cereus MM3]
          Length = 252

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  + DI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNVDIFCLQEIKLQDGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRAYIKQL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                   +     + +  I     +  +      +  A 
Sbjct: 139 PVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|170750144|ref|YP_001756404.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM
           2831]
 gi|170656666|gb|ACB25721.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM
           2831]
          Length = 269

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/309 (9%), Positives = 75/309 (24%), Gaps = 70/309 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
           ++ + +WNIN                       L+ ++      D++ LQE         
Sbjct: 2   QLTVTTWNIN----------------SVRLRIDLVLRFLAEHKPDVLCLQETKCPDDAFP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K    + +                +    +  +A+  +     +        +D+    
Sbjct: 46  LKALRGSGYEHVM-----------FAGQKGYNGVAILSRFPLHTRSVMGFCERQDA---- 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R    +L    G    ++          D  +   +P  +        L+ W  ++  
Sbjct: 91  --RHISAVLGPEAGAASGIVLHDFYVPAGGDVPDRDLNPKFAHKLDFLSELRAWGGKRVS 148

Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSL-IRFPKEKDSR 244
              P ++ GD N                  ++     +  + +                 
Sbjct: 149 G--PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPLETEALEVLRGEAGWIDAARHLTPEP 206

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+  +  +          +             +R SD
Sbjct: 207 EKIYTWWSYRSPDWSAANKGRRLDHAWVSPDLAG-------TVRKVEVLREARAWERPSD 259

Query: 295 HCPISIDYD 303
           H P+++  +
Sbjct: 260 HAPVTLTLE 268


>gi|119491403|ref|ZP_01623422.1| Exodeoxyribonuclease III xth [Lyngbya sp. PCC 8106]
 gi|119453398|gb|EAW34561.1| Exodeoxyribonuclease III xth [Lyngbya sp. PCC 8106]
          Length = 261

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 91/304 (29%), Gaps = 68/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  + +    D++ LQE    +     
Sbjct: 1   MKIATWNVN----------------SIRTRKEQVLAWLQANPVDLLCLQETKVID----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFSRAG 141
                     S    + +    S    +  +A+  +            +L      +   
Sbjct: 40  -----PDFPRSPFEDLGYHLYVSGQKAYNGVAIFSRQPLEDVSLGFTAILAQNTVQTFDE 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +R +   ++     I V+++++ +   + S +  Y  S        + LK+++ +  E 
Sbjct: 95  QKRVIAGTID----GIRVINLYVPNGASVGSEKYLYKLS------WLKLLKEYLQKTLEK 144

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
                + GDFN  +     ++   +                     L    ++ +S    
Sbjct: 145 NPNICVCGDFNIALEDRDIHNPKGRENHIMASDAERQALKEILELGLADAFRKFNSESEQ 204

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  +  + Y+              D    + ++ SDH P+
Sbjct: 205 FSWWDYRAASFPRNKGWRIDHHYLTSSLYEKAKSCII-------DKTPRKLEKPSDHTPV 257

Query: 299 SIDY 302
            +++
Sbjct: 258 IVEF 261


>gi|303236932|ref|ZP_07323510.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           disiens FB035-09AN]
 gi|302482861|gb|EFL45878.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           disiens FB035-09AN]
          Length = 324

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 95/321 (29%), Gaps = 50/321 (15%)

Query: 19  SVAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTT----SDYTLLRQYAKNLD-- 65
              +++R+V WN+  L +        +   L  +    T          + Q   +    
Sbjct: 17  FAQERLRIVEWNVENLFDTVHDSLKNDSEFLPNSPRHWTRTKYWEKLNKIGQGILSCGED 76

Query: 66  ------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                  D++ L E+ + + +  +  ++        +    +    SN+     +A+   
Sbjct: 77  SASWTLPDLIGLCEVENDSTMIYLTQRSNLR-----KARYEYVMTASNDGRGIDVALLYS 131

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYS 178
                      L  K        R  + ++ E+ +G  + ++ +H  S    +       
Sbjct: 132 PFSFRFIHADTLAIKPIKGMKPTRDILHVVGEVASGDTLHLVLVHAPSRSGGE------K 185

Query: 179 PSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            S       A+ + + I   K  E     +I GDFN   +       +   +        
Sbjct: 186 VSEPFRLHVAENICNLIDSIKAQEKQANILIMGDFNDYYDNASLRKIYEHGMVNISKNAI 245

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------------ 284
                 +     +       +D  ++ Q+    + Q S ++  +  ++            
Sbjct: 246 GKHGAKA---TYRYKGEWNSLDQMLISQHLLPKVKQCSINDAPFLIEEDNKYGGVKPRRF 302

Query: 285 --IKSRGKRLSDHCPISIDYD 303
                     SDH P+ +D  
Sbjct: 303 YNGMRYNGGFSDHLPLVLDLS 323


>gi|312113058|ref|YP_004010654.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100]
 gi|311218187|gb|ADP69555.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100]
          Length = 262

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 76/302 (25%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WN+N                          Q+ K    D++ LQE+         
Sbjct: 2   LTVATWNVN----------------SIKQREIAAVQWLKRARPDVLCLQEIKCQTEA--- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K          ++G     +   +R
Sbjct: 43  -------FPRGAFEDLGYNCAVIGQKSFNGVAILSKFPI----DETVVGLPGDDTDEQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +L    G    V  ++  +   + S +  Y        +     K           
Sbjct: 92  YIEAVLSLPGGGAFRVASVYAPNGNPVASPKLDYK------LEWLARFKAHAETLLSYEE 145

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           PF +AGD+N                     L +   F + ++   +              
Sbjct: 146 PFALAGDYNIIPRGIDVYNPAAWTEDALYRLESRQAFRRILNLGLADAVEACNSGGGQFT 205

Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + +           ID+ ++   A+  L            D       + SDH P+ +
Sbjct: 206 FWDYQAGAWQKNLGLRIDHILLSPQAFSRLRS-------TVIDRTPRSWDKPSDHTPVQV 258

Query: 301 DY 302
             
Sbjct: 259 TL 260


>gi|302405771|ref|XP_003000722.1| endonuclease/exonuclease/phosphatase family protein [Verticillium
           albo-atrum VaMs.102]
 gi|261360679|gb|EEY23107.1| endonuclease/exonuclease/phosphatase family protein [Verticillium
           albo-atrum VaMs.102]
          Length = 334

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 76/288 (26%), Gaps = 21/288 (7%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAK 82
           RL+S+NI   +    +        R  S  + L          ++ LQE+ +     +  
Sbjct: 50  RLISYNIRW-AVPTVLPPEPAWSDRLPSLASQLFHETAGRPTSLICLQEVLATQLADIKS 108

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                TW                S             +        P       +  A  
Sbjct: 109 ALGTPTWSSVGVGRDDGAEGGEFSPILFRPDAYELLNSSTRWLSPTPEEPGSKGWDAALP 168

Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           R      +    +G  +  +  H     F    +     S  LL + A      +     
Sbjct: 169 RVVTTATLRDRRSGAPLTYMCTH-----FDHIGQTARVESARLLVRFAAEAAVVVD---G 220

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK----NLRNKIP 256
              P  + GD N         +   +    +   +  P+      N       +      
Sbjct: 221 EETPVFLGGDLNITPENPAYLEMVAEGNYHDAKDVVDPRRIHGHLNTFAGFSDDRSGWSR 280

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ID+  +    ++  +Q          ++       +SDH P+ +D +F
Sbjct: 281 IDHVFV----WRPEVQGMALLNYGVLENKFDDNLWISDHRPVIVDVNF 324


>gi|256839005|ref|ZP_05544515.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739924|gb|EEU53248.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 365

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 95/334 (28%), Gaps = 78/334 (23%)

Query: 4   KYVLALVFFLVPCTASV--------------AQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           K++L  +F  + C   V               + ++++++N+     +    +  N    
Sbjct: 68  KFLLIGIFSFLLCWGPVKRYFPFHSHKDVPREEVLKVLTYNVMAFGYKNHTKIAPN---- 123

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  + QY  N DADIV LQE  +  +   +     +    S     +   + S   
Sbjct: 124 ------KIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDA-LSMYPYRSVFYQSSTKF 176

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               IAV  K      +        +         +    V I GKK+ +++ HL+SF  
Sbjct: 177 QSFGIAVFSKYPLSNSRMVKYDSDYN--------GSSVHEVNIKGKKLTLINNHLESFKL 228

Query: 170 LDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFV 206
                  YS                       P+  + ++QA+ +   I          +
Sbjct: 229 TMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSKEIKN--AKGDYVL 286

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GDFN       +           D +  F +                 ID  +   N 
Sbjct: 287 VCGDFNDTPISYAHRTI------QGDLMDAFAESGRGMGITYNQNFFWFRIDNILHSPNM 340

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                            +        SDH P+  
Sbjct: 341 TSM--------------NCSVDKVAYSDHYPLWC 360


>gi|222478473|ref|YP_002564710.1| Endonuclease/exonuclease/phosphatase [Halorubrum lacusprofundi ATCC
           49239]
 gi|222451375|gb|ACM55640.1| Endonuclease/exonuclease/phosphatase [Halorubrum lacusprofundi ATCC
           49239]
          Length = 280

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 80/300 (26%), Gaps = 46/300 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N+   +  +    W +           + +  +    D+   QE          
Sbjct: 4   IRVLSYNVRYANRDDHHDAWHD-------RRDAVGRLVRFHRPDVAAFQEPLPGQRRDLR 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-----FS 138
              + +             +   +      IAVR     V+      L    S     + 
Sbjct: 57  ERLSEYEFV-------GRGREADDEGESCPIAVRTDRWEVVDDDTFWLSETPSEPSTDWG 109

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R A    V        +L ++     F     +    S  LL Q+   +      +
Sbjct: 110 ADYPRIATWARVRAIDGDAALLVVNTH---FDHVSAHARRESARLLCQRLPDVAGPDAGE 166

Query: 199 KESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKD 242
            +  +P V+ GDFN       +                 DD    +    +        +
Sbjct: 167 SDETIPVVLVGDFNCTSGSDPHRILVGDDPTAETDTAPIDDSGIALRDAATAADLRHGPE 226

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +       L +   ID+ ++                     D   RG+  SDH P+    
Sbjct: 227 TSLTDFARLIDGRRIDHALVSPEVGAEAFA--------TLTDRDDRGRYPSDHLPVLARL 278


>gi|327314063|ref|YP_004329500.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
 gi|326945779|gb|AEA21664.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
          Length = 347

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/352 (12%), Positives = 94/352 (26%), Gaps = 64/352 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50
           +RK +  L   ++   ++ AQK      +  +N   L +        +     + S    
Sbjct: 1   MRKLLFVLFCTVLFGASASAQKKFSVYAVGFYNQENLFDCMHDKGKNDYDFTPEGSYHWN 60

Query: 51  T----SDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
                     +      +  D+        + L E+ + + +  +  +       +    
Sbjct: 61  EMKYTHKLHNMATVLSEMGTDVLPDVGCALIGLAEVENDHVMRDLTAQPE---LAARNYQ 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +   +  I  A+    K   V      P +      S    R  + +   + G+ +
Sbjct: 118 YVHIEGPDHRGIDCALIYNPKLFAVRNTKLVPYVYDLPKDSMRATRGFLTVSGTLAGEHV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V+  HL S                    Q + LKD + +  +  V  ++ GD N     
Sbjct: 178 TVVVCHLPSRGADSYYRELGGR-------QVKALKDSLLRD-DPKVKVLVMGDMNDDPTN 229

Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
               +      +       +     +           +        D  +M         
Sbjct: 230 KSIRECLSAKAEISEVGPDDMYNPWYNVLVKEGTGTLQYQGKWNLFDQILMSPGLLNKEN 289

Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
           ++ FSE+ + +  I  R                           SDH P+  
Sbjct: 290 RKDFSELRFWKSQIFRRDYLFQETGKYKGNTKRTTAGGVWLDGYSDHLPVVA 341


>gi|91777907|ref|YP_553115.1| exodeoxyribonuclease III [Burkholderia xenovorans LB400]
 gi|91690567|gb|ABE33765.1| Exodeoxyribonuclease III [Burkholderia xenovorans LB400]
          Length = 270

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 83/304 (27%), Gaps = 70/304 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+ ++NIN                   S    L Q+ +    DIV LQE+ + ++   
Sbjct: 3   KLRIATFNING----------------IRSRLPALLQWLEREAPDIVCLQELKAADSA-- 44

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                         R   +            +A+  K    L+    L G +D       
Sbjct: 45  --------FPVEQLRDAGYGAIWQGQSAWNGVAILSKGEAPLESRRGLPGFEDDTHSRYL 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             AV          I V  ++L +       +  Y  +          L     +   S 
Sbjct: 97  EAAV--------GGIVVACLYLPNGNPQPGPKFDYKLA------WFDHLIRHAAKLYRSG 142

Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246
            P V+AGDFN         +                 + + +    +     +  + R  
Sbjct: 143 HPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYRQLLAQGWTDALRTRFGNERVY 202

Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              +   +         ID+ ++  +    L            D         SDH P  
Sbjct: 203 TFWDYFRRHWETNSGLRIDHLLLSADLAPRLRDAGV-------DRWVRGEPHASDHAPTW 255

Query: 300 IDYD 303
           ++ +
Sbjct: 256 VELE 259


>gi|301095100|ref|XP_002896652.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262108882|gb|EEY66934.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 806

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 93/306 (30%), Gaps = 25/306 (8%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R++ +N+  L      S  +      +   + + +   +L+ D+V   E    +A  K
Sbjct: 502 KLRVMVYNV-WLLPGFVSSFNEKVSPWASQRASAIPRCLASLNVDVVVFCEAFCSSAREK 560

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +        F    +++      S+   I        K      +            R  
Sbjct: 561 LVSGMKSQGFIYETKIVGDVSLLSSKKAIDGGCFAMSKYPLSNCEEVTFGNVASGEDRYA 620

Query: 142 NRRAVELLVEINGKKIWV-LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KK 199
           ++  +   V +  K                       S + +    Q   +++++   + 
Sbjct: 621 DKGVIYFQVRVPVKSYSGSDTTQTVHIVGTHLQAWETSLAVATRKGQMTLMRNFVNSLRL 680

Query: 200 ESLVPFVIAGDFNRKINYLG------NNDDFWKTIDPNDS--------LIRFPKEKDSRC 245
               P + AGD N   +  G              +  ++             P   D   
Sbjct: 681 PKHEPVIYAGDMNVNKHADGAQIPEGEYTGMLDLLGVDEPQLQEKSPIYSFDPHSNDLAV 740

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQES-FSEILYNEDDIKSRGK------RLSDHCPI 298
           +   +      +DY ++D++    +   +   ++   ++   SRG        LSDH P+
Sbjct: 741 DGPSSGGIAERLDYVMVDRSHRLPVSASTEIVQLKATKNWAPSRGAIDEILVDLSDHYPV 800

Query: 299 SIDYDF 304
             D+ F
Sbjct: 801 VGDFHF 806


>gi|226228755|ref|YP_002762861.1| exodeoxyribonuclease III [Gemmatimonas aurantiaca T-27]
 gi|226091946|dbj|BAH40391.1| exodeoxyribonuclease III [Gemmatimonas aurantiaca T-27]
          Length = 265

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 82/303 (27%), Gaps = 62/303 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N L       L+                + +    D++ LQE  S     ++
Sbjct: 1   MKIYSWNVNGLRAVLKKGLFMP--------------FIETHQPDVLCLQETKSEREQVEI 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++++     +S     +     ++V     + + + Y L+      S    R
Sbjct: 47  -DLAGYHEYWNSATTKGYSGTAIFSRTE-PLSVTNGFAKAVAKKYTLVDDAGRDSETEGR 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +K +V+ ++  +                L SQ          +  E   
Sbjct: 105 -----VITAEFEKFFVVTVYTPN-------AKDDLSRLPLRSQHWDAAFLAHCKALEMKK 152

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                           +++      +           + +
Sbjct: 153 PVVFCGDLNVAHTELDLANPKPNRGRKGFTDEERQGFQSFLDAGFVDTLRMFHQGNGHYS 212

Query: 249 KNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDY ++     K +                      SDHCP+S+
Sbjct: 213 WWSHFANSRARNVGWRIDYVLVSAALQKSVATAEIH-----------ADVMGSDHCPVSV 261

Query: 301 DYD 303
              
Sbjct: 262 TLS 264


>gi|254413797|ref|ZP_05027566.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196179394|gb|EDX74389.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 550

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/332 (10%), Positives = 90/332 (27%), Gaps = 54/332 (16%)

Query: 18  ASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
               + + + ++N+  L           K S +      T + +  + +DADI+  QE+ 
Sbjct: 222 PVRQKTLNVGTFNLYNLVLPNVTYYETNKYSPELYQRKKTWIARQIEQMDADIIGFQELF 281

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              A+ ++  +       + +    +    +       +A+  K   +  Q +     K 
Sbjct: 282 HEEALREILTE-------TPDCANANLITANPTGDKPTVALLSKVPVLNHQIFTEFPEKA 334

Query: 136 SFS--------RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                       + +R  + + + ++   +  V   HLKS   +   +   S        
Sbjct: 335 RLDIEGTAIPLHSFSRPLLSVDLALSDTVECTVFVAHLKSKRPIIPEDADRSDPMEKAKG 394

Query: 187 QAQWLKD-----------WITQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWK 226
           QA+ L              +   +    P ++ GD N                     + 
Sbjct: 395 QARALLRRAAEATALRVILMETLQNRKRPVIVIGDLNDSGLAVTSKIISGEPPWEKLRFA 454

Query: 227 TIDPNDSLIRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                  ++ +        +        +        +D+ ++ +               
Sbjct: 455 QKQEIWDVLLYSVKDIQARQSYGDFYYTHIYNGYYESLDHIMVSEELVAQNPDRIGKVTY 514

Query: 280 YNEDDIKSRGKRL---------SDHCPISIDY 302
            +  +     + L         SDH  +    
Sbjct: 515 VSVYNDHLIDETLSYEDMKKWKSDHGQVVASI 546


>gi|319953162|ref|YP_004164429.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
 gi|319421822|gb|ADV48931.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
          Length = 325

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 88/319 (27%), Gaps = 51/319 (15%)

Query: 25  RLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLDAD------ 67
            +  +N+  L + E      ++            +R  S    L      +  D      
Sbjct: 17  TVAFYNLENLFDTEDNPDKLDTDYTPNGKLKWTPERYHSKLFKLASTISKIGFDAIGKAP 76

Query: 68  -IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
            ++ + E+ +   +  +  +             +         I  A+   K+  +V+  
Sbjct: 77  VLIGVVEVENKKVLKDLLAEPVLASNAYDFIHYDSPDE---RGIDNALIFDKRFFQVIHS 133

Query: 127 S-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC-FLDSLENTYSPSCSLL 184
              PL        +   R  + +  ++N +++ +   H  S     D  E     + + +
Sbjct: 134 EAIPLKVFNLDGQQDMTRDILYVHGKLNEEEVHIFVNHWPSRRDGGDETEYKRIKAAATI 193

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
               + L++     K S   +++ GDFN             +    N        ++ S 
Sbjct: 194 INFMKVLEE-----KYSEPNYIVMGDFNDGPQTASVKKLVGEKNLFNPMEKLLTPKRGSA 248

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDDI 285
               K        D  ++  +   F  +                     F    +     
Sbjct: 249 NYKFKW----SLFDQILISHSFLNFEKKTHSFNSSNIFDDHFLTEFKGKFKGSPFRTYVG 304

Query: 286 KSRGKRLSDHCPISIDYDF 304
           +      SDH P+ I   F
Sbjct: 305 RRYMGGYSDHFPVYIHLKF 323


>gi|237716270|ref|ZP_04546751.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262407875|ref|ZP_06084423.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294807694|ref|ZP_06766487.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229443917|gb|EEO49708.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262354683|gb|EEZ03775.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294445130|gb|EFG13804.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|295084435|emb|CBK65958.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A]
          Length = 365

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 87/299 (29%), Gaps = 68/299 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++N++  + +                   +  Y +NL ADI+  QE      +   
Sbjct: 110 LTVATYNVDAFNHEHTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F  ++     S      +            +AV  +     +       +K+        
Sbjct: 155 FGIDSISAALSNWPYH-YIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCS------ 207

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------PSC 181
             +   +EING+ I + + HL++     +                             + 
Sbjct: 208 --LACDIEINGRTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQRVEHATLGLIDGLHENF 265

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
              + QA  LK  I     S  P ++ GDFN   +    +     TI  +     F    
Sbjct: 266 RKRAVQADLLKQLI---AASPYPTLVCGDFNSLPSSYVYH-----TIKGDKLQDGFQTSG 317

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                  K  ++ + IDY +                   N  D  S     SDH P+ +
Sbjct: 318 HGYMYTFKYFKHLLRIDYILHSPEL--------------NSTDYFSPDLNYSDHNPVVM 362


>gi|37520069|ref|NP_923446.1| hypothetical protein glr0500 [Gloeobacter violaceus PCC 7421]
 gi|35211061|dbj|BAC88441.1| glr0500 [Gloeobacter violaceus PCC 7421]
          Length = 1019

 Score = 91.5 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/340 (11%), Positives = 78/340 (22%), Gaps = 75/340 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72
              A+   ++ + S+N+  L   +            T     L           DI+ LQ
Sbjct: 616 TTLAAGGSQLTIASFNVENLDPGD------------TERIAGLAAAVTGNLKSPDILVLQ 663

Query: 73  EMGSYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           E+   N                            +   +    + N    +   +I    
Sbjct: 664 EVQDNNGPTDDGTVDSTTTLADLAAAIAGVGGPAYNFRF-INPVNNQDGGEPGGNIRVVF 722

Query: 115 AVRKKNVRVLQQSYPLLGA-------------------------KDSFSRAGNRRAVELL 149
                 V  + +  P                               + +   +R+ +   
Sbjct: 723 LFNPARVSFIDRPAPDGTDLSTTAVGAVDGPSGLELTFSPGRIDPANPAFDDSRKPLVGE 782

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLV 203
              NG+K++V+  H  S      L     P    S      QA  +  ++      ++  
Sbjct: 783 FLFNGRKLFVVGNHFNSKGGDTPLFGAAQPPVLNSEPQRLGQATAVNSFVQSLLALDAKA 842

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++ GD N                              +         N   +D+ ++ 
Sbjct: 843 SVIVLGDLNDFQFSPP----LATLQQGGILSNLIDAVSPADAYTFNFQGNSQVLDHILLS 898

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +       +                  LSDH P     D
Sbjct: 899 GSLAAGAEIDIVHLD-------SEFADALSDHDPPLARLD 931


>gi|149909989|ref|ZP_01898638.1| exodeoxyribonuclease III [Moritella sp. PE36]
 gi|149807003|gb|EDM66962.1| exodeoxyribonuclease III [Moritella sp. PE36]
          Length = 274

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 85/311 (27%), Gaps = 70/311 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  +N +   
Sbjct: 1   MKIISFNINGL----------------RARLHQLQAIIDKHSPDVIGLQEIKVHNEM--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPLLGAKDSFSRAGN 142
                     +    + +         H  +A+  K   +   ++  +     +      
Sbjct: 42  -------FPIAAVEDMGYHVFFHGQKAHYGVAMMVKKSTIADVEAIKVQYGFPTDDEEAQ 94

Query: 143 RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R + +  E  +GK I VL+       F      ++        +  Q L  ++     +
Sbjct: 95  KRMIMVTFEQTSGKPITVLN-----GYFPQGENISHETKYPYKRKFYQDLNIYLNDNHTA 149

Query: 202 LVPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKE 240
               ++ GD N                               ++   +        F   
Sbjct: 150 EDDLIVMGDINISPADKDIGIGEPNAKRWLKTGKCSFQPEEREWLAKLQGFGLHDTFRTI 209

Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           K    +       +           ID  +        +++        + D      ++
Sbjct: 210 KPEVSDRYSWFDYRSKGFPDNRGLRIDVILATATLNAKVVES-------DVDYELRAIEK 262

Query: 292 LSDHCPISIDY 302
            SDH PI   +
Sbjct: 263 PSDHAPIWTTF 273


>gi|114778638|ref|ZP_01453454.1| exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1]
 gi|114551103|gb|EAU53664.1| exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1]
          Length = 252

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 76/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  Y ++   D++ LQE  + +A    
Sbjct: 1   MKITTWNVNSLN----------------VRLPHVLAYLRDEQPDVLALQETKTPDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    S    +  +A+  +       S   +           R
Sbjct: 41  ------GFPVAELEAAGYKVIFSGQKTYNGVAMLAR------SSMQQVVNDLPGLDDPQR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   ++     + V+++++ +   + S +  Y        +  Q L D++ ++ +   
Sbjct: 89  RLLAATID----GMRVVNVYIPNGQEIGSDKYAYK------MRWLQALCDFLQEELKQHD 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN                         +F+ T+     +         +    
Sbjct: 139 RLVLLGDFNIAPADIDVHDPTRWQGKILCSEPEREFFSTLLQLGLIDGVRSLHPEKE-MF 197

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID+ ++           +      +         R SDH P+ 
Sbjct: 198 SWWDYRMSAYRRGWGVRIDHLLVTHALALSAAGVAVKYRELD---------RPSDHAPVW 248

Query: 300 IDYD 303
           I+++
Sbjct: 249 IEFE 252


>gi|291513900|emb|CBK63110.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 263

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 89/297 (29%), Gaps = 41/297 (13%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +    A  A+ ++L+S+N+ T   ++G ++W      T        +  +    D+  +Q
Sbjct: 1   MPAFAADGAEPIKLISYNLRTSHGKDGDNVWMKRRHATP-------EMIRREAPDVFGVQ 53

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E               +                          +R +   +   ++ L  
Sbjct: 54  EGLIDQLHYIDTECPQYARVGVGRDDGAEKGEFMAVYY-----LRDRFELLDSGTFWLSE 108

Query: 133 AKD----SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             D     +  A NR    + ++   +GK+ +  + HL                 +   +
Sbjct: 109 TPDKVSRGWDGACNRTVTWVELKDRKSGKEFFYFNTHLDHKGK------------AAREE 156

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             + L + I +      P ++ GDFN  ++         K +           +     N
Sbjct: 157 GVKLLIEKIHEIAGKKAPAIVGGDFNTPVDS-PIFKPLTKYMVS-ARAKAATTDHKGTFN 214

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +  + I ID+          L         +   D       +SDH PI++ + 
Sbjct: 215 GFGSAPDTIVIDHLYYRGKLKCQL---------FATLDGNYGAPYISDHYPIAMVFT 262


>gi|328863402|gb|EGG12502.1| hypothetical protein MELLADRAFT_46528 [Melampsora larici-populina
           98AG31]
          Length = 556

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/333 (11%), Positives = 83/333 (24%), Gaps = 55/333 (16%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +   ++ +NI     +         +          L+ Q      AD++ LQE+     
Sbjct: 219 ETFTMMCYNILCERYASDRMYGYTPSWALNWEYRKDLILQELMQYGADLICLQEVDVEQY 278

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQS------YP 129
                       +       + ++   + +       A   +    +++++        P
Sbjct: 279 EDFFVQNLKDQGYEGVFFPKSRARTMGSEERRHVDGCATFFKTSIFQLIERECVEFNQIP 338

Query: 130 LLGAKDSFSRAGNR--------RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           +       S   NR            L    +G +  V ++H+          +      
Sbjct: 339 MRSESHKTSDMFNRVMTKDNIAVIAMLEHRRSGTRQLVANVHIHW---DPEFRDVKLIQT 395

Query: 182 SLLSQQAQWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNNDDFWKTIDP 230
           ++L +Q + L D   +                 P ++ GDFN        +      I+ 
Sbjct: 396 AMLIEQVENLADRFAKLPPRHSHSPKYQRGTEIPIIVCGDFNSVPTSGVYDYLSHGNIEA 455

Query: 231 NDSLIRFPKEKDSR--------------------CNANKNLRNKIPIDYFVMDQN-AYKF 269
                                                N     K  IDY   ++      
Sbjct: 456 THDDFNSFNYGPYTQQGVQHPLKLKSAYSHLGELPFTNYTPGFKGVIDYIFYNEEVLDVT 515

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +     E    +          SDH P+  ++
Sbjct: 516 GVLGKIDETYLEKVVGFPNAHFASDHVPVLAEF 548


>gi|329965398|ref|ZP_08302322.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328522190|gb|EGF49304.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 361

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 93/336 (27%), Gaps = 78/336 (23%)

Query: 1   MIRKYVLALVFFLVPCT----------------ASVAQKVRLVSWNINTLSEQEGVSLWK 44
           M RK+   +      C                    A+ +++ ++N++   +        
Sbjct: 65  MARKWWALIPLAAFFCNWNYLTSVIQFHSPKEKTPSARHLKIATYNVHNFGD-------- 116

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
              + T      + +Y +    DI+ LQE G+     + F  ++     S    +   + 
Sbjct: 117 ---EITGYSCKEMARYMQQEHVDILCLQEFGNN----RYFTADSIRKALSHWPHVLTLQE 169

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
           DS         +RK     +   YPL+  +          ++   +      + +L+ HL
Sbjct: 170 DS---------LRKVLPIAVFSRYPLIHERFITYPQSANCSMLCDIVAGTDTVRLLNSHL 220

Query: 165 KSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK---------------KESLVPF 205
           ++                       + A+   + +                  K S  P 
Sbjct: 221 QTTSVSQKRGKWQREMASDDARREIRAAKDAAETLHGNFVKRTLQTYTVGYFAKNSPYPV 280

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           ++ GDFN   +       F   +        F    +      +  +  + IDY      
Sbjct: 281 IVCGDFNSLPSSYT-YQYFSGFLKDG-----FRTAGNGYMYTYRYGKKMLRIDYIFHSNE 334

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                                   +  SDH P+ ++
Sbjct: 335 LE-------------GMSYYSPTQEFCSDHNPVIME 357


>gi|260549985|ref|ZP_05824200.1| nuclease [Acinetobacter sp. RUH2624]
 gi|260406977|gb|EEX00455.1| nuclease [Acinetobacter sp. RUH2624]
          Length = 812

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 94/325 (28%), Gaps = 50/325 (15%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K +DAD+  L E+ + 
Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHRKIVSALKAIDADVYGLMEIANN 520

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +         + +      R   + I  AI    K V+ L +   L     
Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGGDVIAVAIIYNSKRVKPLNKPVVLDLGD- 579

Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLLS 185
                 NR  +    +     K   V+  HLKS        N+                 
Sbjct: 580 -----KNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCTGVDANSTDADQNDGQGCWNPTRV 634

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  W+ +          ++ GD N            ++  +    L      + +
Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 692

Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
           +  +                 +D+ + D + Y  +++     I  +E  +          
Sbjct: 693 QAYSYVFGVASDANGNGGAGNLDHAIADADLYPKVVRTFAWHINADEPTVLDYNEEYKTD 752

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +D D
Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777


>gi|323343049|ref|ZP_08083280.1| endonuclease/exonuclease/phosphatase [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322463113|gb|EFY08308.1| endonuclease/exonuclease/phosphatase [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 360

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 97/319 (30%), Gaps = 57/319 (17%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   L+++NI               G     ++++    +   +    ++ + D    QE
Sbjct: 62  KPYTLLTYNIGYAALGQDQDFFMDGGNKAGADTLEEVLLNMDGILSIFQDTNPDFALFQE 121

Query: 74  MGSYNAVA------KVFPKNTWCIFYSTERLINH---SKRDSNNDIHTAIAVRKKNVRVL 124
           +      +       +     +   ++    + +             + IA   K   + 
Sbjct: 122 VDLSGKRSFNVNQYDLLRNEGYHGIFAPNYKVKYVPVPFTHPMGGAESGIATLSKAEPLS 181

Query: 125 QQSYPLLGAKDSFSRAG-NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
              Y   G +    +    +RA  +      NGK+  +++ H  +F              
Sbjct: 182 STRYQFNGKEPLVKQLFDLKRAFSVTRYPMDNGKEFILINAHFSAFDKGG---------- 231

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +  QQ   +K+ +  +       V+ GDFN ++    +++  W    P+  +       
Sbjct: 232 KVRVQQLAQMKEVLESEYNQGNYVVLGGDFNHELPTTDSHNFTWTDSYPDWIMELPEDFA 291

Query: 242 DSRCNANKNLRNKI----------------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
            S  +   +  N                   ID F++  N             + +   +
Sbjct: 292 PSGYHWGVDPDNPSVRAVDKAYRPQETFMAVIDGFLVSDNI-----------EIIDTVGL 340

Query: 286 KSRGKRLSDHCPISIDYDF 304
            +   + SDH P+S+   F
Sbjct: 341 GTVDFKYSDHNPVSMTIIF 359


>gi|46109934|ref|XP_382025.1| hypothetical protein FG01849.1 [Gibberella zeae PH-1]
          Length = 298

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 77/290 (26%), Gaps = 19/290 (6%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    +R+V++N+   + ++     +   +R       L       ++  + LQE   + 
Sbjct: 20  AQRMPLRIVTFNVRY-ATKKFEKNERPWAERRPKLINQLNFITAGHESPFICLQECLFHQ 78

Query: 79  AVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                    + W                S       I    ++        P       +
Sbjct: 79  VNEIQEDLGSKWQHIGRGRGTKPEDGEFSPIFYRDDIWKNVRSEVRWLSKTPE-KPSRGW 137

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
               NR       E       V+        F          S  LL + A+   +W   
Sbjct: 138 DAVLNRIVTMAEFEHRVTATRVVVFSTH---FDHIGVEARQNSAKLLVKFAR---EWGQA 191

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----N 253
             +     +I GDFN + +              +D     PKEK                
Sbjct: 192 GNKKASAVLIGGDFNSEPDDGAYKTITAPGSGISDVSDLVPKEKRYGNETTYTSFGGTWP 251

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ID+  + +     +         +        G R+SDH P+  D D
Sbjct: 252 TSRIDFLFIQEPRTATVQTFGVLANSF------DDGVRISDHRPVVSDLD 295


>gi|320007682|gb|ADW02532.1| Endonuclease/exonuclease/phosphatase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 804

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 80/328 (24%), Gaps = 69/328 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79
           +++ + ++N+  L  ++             + +  L           D+V L+E+   N 
Sbjct: 492 KELAVATYNVENLDAKD-----------EQAKFDTLAHGVAVSLSSPDVVSLEEIQDDNG 540

Query: 80  V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                             A V        +            +   +I          V 
Sbjct: 541 AVNDGTVGSEATLKRFTDAIVAAGGPRYAWRYVAPEDGRDGGEPGGNIRNVFLFNPDRVD 600

Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
            + +                       P      S +   +R+ +       G+ ++V+ 
Sbjct: 601 FVDRPGGDATTAVQAVKTKKGATLSVSPGRINPTSTAWDSSRKPLVGEFRFRGESVFVIA 660

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            H  S     SL   Y      S +   +QA  +  ++T   K +     V  GD N   
Sbjct: 661 NHFASKGGDQSLHGRYQEPARSSEAQRVRQAAEVNTFVTSLLKADKSARVVTLGDLNDFA 720

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                       +                  +     N   +D+ +      +F      
Sbjct: 721 FSPTVKTLTAGKVLR----PLITTLPAGEQYSYVYDGNSQTLDHILTSPAVSRF------ 770

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          + SDH P  +  D
Sbjct: 771 --DYDVVHINAEFADQASDHDPQIVRID 796


>gi|197103425|ref|YP_002128803.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
 gi|196480701|gb|ACG80228.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
          Length = 262

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 79/303 (26%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N ++                    +L ++ +    D+V LQE          
Sbjct: 1   MRIATFNVNGVNG----------------RLPVLLRWLEETRPDVVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    +       +A+  +    ++    L G  +        
Sbjct: 35  LKAPQERFPAEAIERAGYGAIWAGQKSWNGVAMLARGAEPVEIRRGLPGDTEDLQSRYLE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AVE ++        V  ++  +       +  Y  +          L     +  ++  
Sbjct: 95  AAVEGVL--------VACLYAPNGNPAPGPKFDYKLA------WLARLNRRAAELVKTCT 140

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN                       +   ++ +              +     
Sbjct: 141 PAVLAGDFNIIPTELDAYKPERWVDDALFRPESRAAFEALLDQGWRDALRSLHPAERIFT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          ID+ ++       L+           D       + SDH P+ +
Sbjct: 201 FWDYFRNAFPRDAGLRIDHLLLSPTLSSRLVAAGV-------DRHVRGWAKTSDHAPVWV 253

Query: 301 DYD 303
           + +
Sbjct: 254 ELE 256


>gi|325527267|gb|EGD04639.1| exodeoxyribonuclease III [Burkholderia sp. TJI49]
          Length = 258

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 78/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    I +    +    +  +A+  +    L      +           +
Sbjct: 35  LKLPDEKFPRADLEAIGYRSWFTGQKTYNGVAILAR--DTLPFDESDIVRNIPGFDDPQQ 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R V + ++     +  +  +  +    DS +  Y        Q    L+ W+  + +   
Sbjct: 93  RVVAVTID----GVRFVSAYFPNGQAPDSDKFVYK------MQWLDALQAWLRAEMQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D      ++ SDH P+  
Sbjct: 203 WWDYRMFAFRRNAGLRIDHILLSPALADTCTSC-------VVDRTPRTWEQPSDHTPVVA 255


>gi|330811892|ref|YP_004356354.1| hypothetical protein PSEBR_a4928 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380000|gb|AEA71350.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 359

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/341 (12%), Positives = 96/341 (28%), Gaps = 68/341 (19%)

Query: 8   ALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--------DYTLL 57
            L        A +A  Q +++++WN+  L+ +  V     +     S            +
Sbjct: 35  TLPVSCTANAAPLAPGQALKVMTWNVQFLAGKRYVFWHDLAQGNDESPTLEDMAFSLDEV 94

Query: 58  RQYAKNLDADIVFLQEMG------SYNAVAKVFPKNTWCIFYSTE-------RLINHSKR 104
            +  ++   D+V LQE+        Y    K+  +    ++             +     
Sbjct: 95  ARVIRDEQPDVVLLQELDKGAKASDYQDQLKLLQERLADLYPCGTSAFDWKADFVPDPHI 154

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDI 162
             +     A   R +     +   P+        +   + A+ +       G ++ VL+ 
Sbjct: 155 FGSVGRQLATLSRYRIDHAERVQLPVADTNIISRQFQPKNALLVSYLPLSGGGQLAVLNT 214

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------- 212
           HL             +     L +Q   +   + + + +  P++I GDFN          
Sbjct: 215 HL----------ERATEPDETLPRQITAVAKALDKFESAGTPWLIGGDFNLLPLGQYRRL 264

Query: 213 -----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
                        ++ L +      T +    + R         +   N      +DY  
Sbjct: 265 PTEQRTPYSADSPLHLLWDKYPMIPTNNEASGIDREHWLTHYPNDPGLN-GPDRTVDYLF 323

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                   +    R+SDH P+   +
Sbjct: 324 YSPRLK-----------RVEAQVRQDDTLRISDHLPVIARF 353


>gi|289645316|ref|ZP_06477309.1| Endonuclease/exonuclease/phosphatase [Frankia symbiont of Datisca
           glomerata]
 gi|289504875|gb|EFD25980.1| Endonuclease/exonuclease/phosphatase [Frankia symbiont of Datisca
           glomerata]
          Length = 327

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/328 (11%), Positives = 87/328 (26%), Gaps = 50/328 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66
                 A ++ + ++N+  L   +  S +    ++  ++           ++      ++
Sbjct: 9   STGGPGAGQISVATFNVENLDPSDPQSKFDGLAQQIVTNLAAPGIITVEEVQDNDGATNS 68

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
            +V   +  +    A          +  T  + +    +   +I      R         
Sbjct: 69  SVVAADQTWTRLINAIGAAGGPTYTYQQTNPVDDQDGGEPGGNIRVGFLFRTDIGLTFAS 128

Query: 127 SYPLLG-------------------------AKDSFSRAGNRRAVELLVEINGKKIWVLD 161
             P                               + +   +R+ +      N K + V+ 
Sbjct: 129 GTPGGSTTAVAVSDSGNPADRVNLSVNPGRIDPTNSAFNASRKPLVGKFYFNSKPLLVIA 188

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
            H  S    D L   Y P    S +  +QQA  +++++      +S    V+AGD N   
Sbjct: 189 NHWNSKGGDDPLFGRYQPPALTSETQRNQQATVVRNFVQSILAIDSQARIVVAGDLNDFP 248

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                     +T+             D+         N   +D+ ++             
Sbjct: 249 YSAPV-----QTLTSAGLTDLPATLADAERYTYVYDGNSQVLDHILLSAALAGAAHSYDV 303

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +       +      SDH P      
Sbjct: 304 VHVNSEFATQQ------SDHDPQVARLT 325


>gi|182677440|ref|YP_001831586.1| exodeoxyribonuclease III Xth [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633323|gb|ACB94097.1| exodeoxyribonuclease III Xth [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 272

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/306 (9%), Positives = 76/306 (24%), Gaps = 64/306 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L +WNIN                       L+ ++      D++ LQE          
Sbjct: 3   LSLATWNIN----------------SVRLRIDLVTRFLTEQAPDVLCLQETKCR------ 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              ++     +  +L       +    +  +A+  K               D+       
Sbjct: 41  ---DSEFPLAAFHKLGYSHIAINGQKGYHGVAIVSKIPFAESGKRDFCAKGDARHITVTL 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                      + I + + ++ +    D  +   +P  +        + +W+     +  
Sbjct: 98  LPE----TTPARPINLHNFYVPAG--GDEPDPEINPKFAHKLAFLDEMAEWMRTDLIAHR 151

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N                   +     +   + I+    +             
Sbjct: 152 DAIIVGDLNIAPLETDVWSHKALLKVVSHTPIEVEKLGRVINAGPWIDALRHHVPPEEKL 211

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  +  + L   +                R SDH P
Sbjct: 212 YTWWSYRSPDWSKADKGRRLDHIWVSASLKQHLDGLTI-------LRDSRGWDRPSDHVP 264

Query: 298 ISIDYD 303
           +++  +
Sbjct: 265 VTVQLN 270


>gi|167622812|ref|YP_001673106.1| endonuclease/exonuclease/phosphatase [Shewanella halifaxensis
           HAW-EB4]
 gi|167352834|gb|ABZ75447.1| Endonuclease/exonuclease/phosphatase [Shewanella halifaxensis
           HAW-EB4]
          Length = 377

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/365 (12%), Positives = 106/365 (29%), Gaps = 84/365 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           + +++L S+N+    E            S ++       L  +      D++  QE+ S 
Sbjct: 10  SNRLKLASFNLFNYIEPPLAYYDFENIYSKEQWHKKQRWLADFLARHQPDVIGFQEVFSA 69

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR---KKNVRVLQQSYPLLGAK 134
           +A+A+   +  +   ++              D    +A +   ++ V +   S    G  
Sbjct: 70  DALAQQMSEAGYK-HFAVVDSPTIIDDYICRDPVVGLASKFAFEEVVSIEVDSQYAAGLG 128

Query: 135 DSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCF------------------------ 169
            + + A +R+ +   V++    +  +  +H KS                           
Sbjct: 129 LNQNFAYSRKPLRATVQLPQIGLCDIYVVHFKSKRPHLDELPQPKFTQTANRSSAAPLVN 188

Query: 170 -----LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------ 218
                  +    ++ S    S+ A      + ++ E+  P V+ GDFN +++        
Sbjct: 189 FGELLGRNSLGQWASSIQRGSEAALLFHAMLQRRIETNQPMVLMGDFNDELSSSVLSALT 248

Query: 219 --------------------GNNDDFWKTIDPNDSLIRFPKE---------------KDS 243
                                    F + +     +    K                + S
Sbjct: 249 TRELRFEKEGLGELANFPLTDAYKLFQQGLLDLFGVETADKNLDDVAVEEELMQAKVRAS 308

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSDHCP 297
           R   +    +   +DY ++  +      +       Y+ +D         R    SDH P
Sbjct: 309 RTPTHYYGASGNVLDYILLSADFDPSYHKSIAEVCDYHTEDRHLVNPSFERDSHSSDHAP 368

Query: 298 ISIDY 302
           +    
Sbjct: 369 VICTL 373


>gi|86138642|ref|ZP_01057215.1| exodeoxyribonuclease III [Roseobacter sp. MED193]
 gi|85824702|gb|EAQ44904.1| exodeoxyribonuclease III [Roseobacter sp. MED193]
          Length = 268

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 85/306 (27%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NIN                   +    L Q+      D+V LQE+ S   + + 
Sbjct: 1   MKIASFNING----------------IKARAAALPQWLDEAKPDVVVLQEIKS---IDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +           ++           +A+  K            G          R
Sbjct: 42  FPRELF-------EERGYNVETHGQKGFNGVAILSKLPLEDVSR----GLPGDEDDLQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFL---DSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                ++    + + +  ++L +   +   D          +      + L        E
Sbjct: 91  WIEATVI--GKQALRICGLYLPNGNPVELTDEGSPVPGGKYAYKLAWMERLHARAQDLLE 148

Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           S +P ++AGD+N                   +   +   ++ I        F        
Sbjct: 149 SEMPALMAGDYNIIPQAEDAKRPEAWREDALHRPESRAAYQRIVNLGFTEAFRARHQGPG 208

Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           + +                ID+F++   A   L            D       + SDH P
Sbjct: 209 HYSFWDYQAGAWNRDDGIRIDHFLLSPQAADLLQDCQI-------DKEIRGRDKPSDHVP 261

Query: 298 ISIDYD 303
           I +D D
Sbjct: 262 IWVDLD 267


>gi|83949536|ref|ZP_00958269.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           nubinhibens ISM]
 gi|83837435|gb|EAP76731.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           nubinhibens ISM]
          Length = 340

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/341 (12%), Positives = 91/341 (26%), Gaps = 63/341 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQEMG 75
           +R+ ++NI   +               ++            +      L AD + + E  
Sbjct: 1   MRIATYNIEWFNALFDDDGELIDDDGWSARHNITRSQQTEAVGIVLTALKADAIMIVEAP 60

Query: 76  SYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             N      +      + +  S          ++      A+      + V         
Sbjct: 61  DQNRQRSTVRALEGFAYRMGLSAR--KAVLGFENETQQEIALLYDPDKLSVRHDPIGEET 118

Query: 133 AKDSFSRAGN-RRAVELLVEIN---------------------GKKIWVLDIHLKSFCFL 170
            K   + A     A  + ++I+                     G    ++ +HLKS    
Sbjct: 119 GKRGSADAPRFDGAFRIDLDIDAKEDIVTFSKPPIELAVETATGTAFRMIGVHLKSKAPH 178

Query: 171 DSLENTYS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
            +     +      +      QA WL+  I     +    ++ GD N         D F 
Sbjct: 179 GATNREAAMRIGIANRRKQLAQAVWLRQRIDGHLAAGETLMVMGDMNDGPGLDEYEDLFG 238

Query: 226 K-----TIDPNDSLIRFPKEKDSRCN----ANKNLRNKIP---------IDYFVMDQNAY 267
           +      +   +  +  P  + +            R   P         +DY ++ +   
Sbjct: 239 RSSVEILLGEGEGALYDPHARAALTRKLGAIYSTSRFYQPETGRYMQALLDYIMVTRGLR 298

Query: 268 KFLIQESFSEILYNED-----DIKSRGKRLSDHCPISIDYD 303
           +            + D     ++       SDH P++ID D
Sbjct: 299 ERGAAWRIWHPFDDPDCWNLPELSRALLTASDHYPVTIDLD 339


>gi|254523139|ref|ZP_05135194.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14]
 gi|219720730|gb|EED39255.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14]
          Length = 260

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 85/304 (27%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N+L+                     L Q+ K    DIV +QE          
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLEQWLKAFGPDIVGIQET--------- 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S      +    +    +  +A+  +          + G +D   R    
Sbjct: 36  -KLEDHKFPDSALIAAGYRSVFAGQKTYNGVALLSREP-AQDVQIGIPGFEDEQKR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++      + V+++++ +   + + +  Y        +  + +  WI ++ +   
Sbjct: 90  -----VIAGTFGDLRVINLYVVNGQDIGTDKYDYK------LRWLEAVHAWIAEELQRHP 138

Query: 204 PFVIAGDFNRKINYLGNNDD-FWKTID--------------PNDSLIRFPKEKDSRCNAN 248
             ++ GDFN   +    +D   W                      L    +  +      
Sbjct: 139 KLIVMGDFNIAPDARDVHDPEVWNENHILTSTAERGALNKLLQLGLHDGFRLHNDEAGTF 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID  ++        +           D      +R SDH P  
Sbjct: 199 SWWDYRAAGFRRNLGLRIDLTLVSDALKGSAVASGI-------DREPRTWERPSDHAPAW 251

Query: 300 IDYD 303
           ++ +
Sbjct: 252 VEVE 255


>gi|163119479|ref|YP_079289.2| hypothetical protein BL01872 [Bacillus licheniformis ATCC 14580]
 gi|145902986|gb|AAU23651.2| hypothetical protein BL01872 [Bacillus licheniformis ATCC 14580]
          Length = 241

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 85/290 (29%), Gaps = 58/290 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76
           K  ++++NI+    ++              D             DI+ L E+        
Sbjct: 2   KFSIMTFNIHHGKGRDR-----------RVDLGRTAGVIAQSGCDIIGLNEVDRHFSNRS 50

Query: 77  --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              + + ++  +       +    ++ S  DS+       A+  +     ++ +      
Sbjct: 51  DYEDQIGRLAEQLNMHY--AYCPSLSLSSGDSSEKRQYGNALLTRFPIKKERHH---SFN 105

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  +E  V I  +   V   HL    +L   +  +                 
Sbjct: 106 FVKGLIEGRSLLEADVRIGDRLFRVFVTHLSLNPWLHGKQTDF----------------L 149

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I + +ES +P ++ GDFN K    G                 + + +  +   + + R +
Sbjct: 150 IEKVQESDLPVIVTGDFNMKPYSRGWKKV------AEKLADLWDESQYGQGFTHPSHRPR 203

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +DY  +  + +    +    +               SDH P+     +
Sbjct: 204 RRLDYIFLSPSFHVSAAEIVAVDPN------------ASDHLPLKGSITY 241


>gi|91225419|ref|ZP_01260541.1| hypothetical protein V12G01_08830 [Vibrio alginolyticus 12G01]
 gi|91189782|gb|EAS76055.1| hypothetical protein V12G01_08830 [Vibrio alginolyticus 12G01]
          Length = 317

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 105/312 (33%), Gaps = 30/312 (9%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           S   ++  V+ N+                 S+++     +  ++  + L+ D++ LQE+ 
Sbjct: 2   SQPSRITFVTANLFNFVAPPNAYYDFENIYSLEQWRDKLSWTQRQVEKLEGDVIGLQEVF 61

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLG 132
           S       F    +  +++T    +       +    AIA R    +V    +    L  
Sbjct: 62  SIEKTQAFFSTIGYP-YFATVDTPHVEDEYIYSSPVVAIASRFPIEKVQAVEFDLATLEP 120

Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENT-------YSPSCSLL 184
              S +   +R+ +   ++      I V   HLKS    DS +            S    
Sbjct: 121 FGVSVAPEFSRKPIYAQVIHPVLGHIAVYVTHLKSQRPADSEQPETSSTIIGRWLSTQQR 180

Query: 185 SQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------NDSLI 235
             +A  L+D +  + ++  +P V+ GD N+ I  +  N                 +  L+
Sbjct: 181 GWEAAMLRDAMQKRYRKEPMPTVLMGDMNQPITPISVNSALVSNTGDSVTELQLKDGWLL 240

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRG 289
           +    KD R   + +      +DY ++ Q             + Y   +         R 
Sbjct: 241 QSAPLKDERPATHYHFSTGNVLDYILLSQEFDTLSDISVAEVVDYQVSNQHLINPIYDRD 300

Query: 290 KRLSDHCPISID 301
           K  SDH  +++ 
Sbjct: 301 KNASDHAFVALT 312


>gi|107028675|ref|YP_625770.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054]
 gi|116690166|ref|YP_835789.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424]
 gi|105897839|gb|ABF80797.1| Exodeoxyribonuclease III [Burkholderia cenocepacia AU 1054]
 gi|116648255|gb|ABK08896.1| Exodeoxyribonuclease III [Burkholderia cenocepacia HI2424]
          Length = 258

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 80/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +    +    +  +A+  +    L      +           +
Sbjct: 35  LKLPDEKFPRADLEAVGYRSWFTGQKTYNGVAILVR--DTLAVDESDVVRNIPGFDDPQQ 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V+     + ++  +  +   LDS +  Y        Q    L+ W+  + +   
Sbjct: 93  RVIAATVD----GVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLRTELQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D +    ++ SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSPALAATCASCEV-------DRVPRTWEQPSDHTPVVA 255


>gi|149926852|ref|ZP_01915111.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Limnobacter
           sp. MED105]
 gi|149824404|gb|EDM83622.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Limnobacter
           sp. MED105]
          Length = 266

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 79/310 (25%), Gaps = 74/310 (23%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A  ++L +WN+N+L                      L Q+ +    D++ LQE      
Sbjct: 4   SAANIQLATWNVNSL----------------KVRLPHLLQWLEGNPVDLLGLQE------ 41

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQSYPLLGAKDS 136
                         +      +    +    +  +A+  K       +     L    D 
Sbjct: 42  ----LKLTDENFPLTELEAAGYGAVYAGQKTYNGVAILYKKATMPEPVDVQVNLPSFPDE 97

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R         ++      +  +  ++ +   + S +  Y  +          L     
Sbjct: 98  QKR---------VIAATFGDLRFISAYVVNGSEVGSDKFEYKKA------WLDALLKDCD 142

Query: 197 QKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKD 242
                     + GD+N   +    +D      + +  +D            L+   +  +
Sbjct: 143 AWLAQYPKLALVGDYNIAPDDRDVHDPKAWAGQVLCSDDERGRFNTLLDMGLVDSFRLFE 202

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      ++          ID+ ++ +   +              D    + ++ S
Sbjct: 203 QPEKTFSWWDYRMLGFQKNKGLRIDHVLLSKPLAERCTASVI-------DRAPRKWEKPS 255

Query: 294 DHCPISIDYD 303
           DH P      
Sbjct: 256 DHAPAVATLS 265


>gi|52785878|ref|YP_091707.1| hypothetical protein BLi02127 [Bacillus licheniformis ATCC 14580]
 gi|52348380|gb|AAU41014.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
          Length = 243

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 85/290 (29%), Gaps = 58/290 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76
           K  ++++NI+    ++              D             DI+ L E+        
Sbjct: 4   KFSIMTFNIHHGKGRDR-----------RVDLGRTAGVIAQSGCDIIGLNEVDRHFSNRS 52

Query: 77  --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              + + ++  +       +    ++ S  DS+       A+  +     ++ +      
Sbjct: 53  DYEDQIGRLAEQLNMHY--AYCPSLSLSSGDSSEKRQYGNALLTRFPIKKERHH---SFN 107

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  +E  V I  +   V   HL    +L   +  +                 
Sbjct: 108 FVKGLIEGRSLLEADVRIGDRLFRVFVTHLSLNPWLHGKQTDF----------------L 151

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I + +ES +P ++ GDFN K    G                 + + +  +   + + R +
Sbjct: 152 IEKVQESDLPVIVTGDFNMKPYSRGWKKV------AEKLADLWDESQYGQGFTHPSHRPR 205

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +DY  +  + +    +    +               SDH P+     +
Sbjct: 206 RRLDYIFLSPSFHVSAAEIVAVDPN------------ASDHLPLKGSITY 243


>gi|257069696|ref|YP_003155951.1| Exodeoxyribonuclease III [Brachybacterium faecium DSM 4810]
 gi|256560514|gb|ACU86361.1| Exodeoxyribonuclease III [Brachybacterium faecium DSM 4810]
          Length = 266

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 82/306 (26%), Gaps = 67/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN+L                 +    +  + +  D D++ LQE  +       
Sbjct: 1   MRIATWNINSL----------------RARMDRVLAFLERHDVDVLALQETKAK------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  +  +   +       +    +A+  +      ++             G  
Sbjct: 39  ----PQQLDLTALQEAGYEVAAHGLNQWNGVALISRVGLSDVRTELPALPLWPEDETGVV 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
            A  L   +    + +  +++ +   LD     Y        +  + L+    ++     
Sbjct: 95  EARALGGLVGDG-LRIWSLYIPNGRELDHPHYDYK------LRWLEALRAEGARELAEDL 147

Query: 203 -VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                + GDFN                  +        ++ +           +      
Sbjct: 148 SAKVALVGDFNVAPLDEDVWDMEFFDGKTHVSEPERAAFRAVVDAGYADVVRGDHPGP-G 206

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            + ID+ +   +    +            D  + +GK  SDH P
Sbjct: 207 VYTYWDYQQLRFPKRQGMRIDFVLGSPSVQSAVTGSFI-------DREERKGKGASDHAP 259

Query: 298 ISIDYD 303
           + +D D
Sbjct: 260 VVVDLD 265


>gi|90022485|ref|YP_528312.1| extracellular nuclease-like protein [Saccharophagus degradans 2-40]
 gi|89952085|gb|ABD82100.1| Endonuclease/exonuclease/phosphatase [Saccharophagus degradans
           2-40]
          Length = 945

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/354 (12%), Positives = 95/354 (26%), Gaps = 74/354 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ----------EGVSLWKNSVKRTTSDYTLLRQYAKNL 64
               S+   +++ S+N+                       +S+         L Q    +
Sbjct: 498 TAAPSIDGNLKITSFNVLNFFATIDESGVVTMAGHDPRGADSIAERDRQLAKLTQAILAM 557

Query: 65  DADIVFLQEMGSY---------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           DAD+V L E+ +                N+V  V  +  +   +     +          
Sbjct: 558 DADVVGLVELENEFDNVNDGSTAIEMLVNSVNAVAGETLYDYAFPGSSFVGTDAIAVGVI 617

Query: 110 IHTAIAVRKK------NVRVLQQSYPLLGAKDSFSRAG------NRRAVELLVEI--NGK 155
              A+    +          + Q+ PL   +D  +         NR ++ +      + +
Sbjct: 618 YKPAVVQLAEGTVPALLEDSVAQTLPLFAGRDFATNPLFNGVATNRVSLAVSFTHLESKE 677

Query: 156 KIWVLDIHLKS----FCFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKES--LVP 204
              V+  H KS         S  N      +    Q     AQ +  W+           
Sbjct: 678 SFTVVANHFKSKGSSGLTDSSDANFDKNDGAGFWNQRRLEAAQAVIAWLQTSPTGLVDSD 737

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            +I GD N             +  +  +S             +         +DY ++  
Sbjct: 738 QIILGDLNAYAAEEPIQYLLAEGFNNVESEH---------AYSYVFDGQVGTLDYLLVSD 788

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRL---------------SDHCPISIDYD 303
           + ++ L       +  +E D                       SDH P+ + ++
Sbjct: 789 SLFEKLTAAQVWNVNADEADAIDYNLDYGRSASYFDASVAARNSDHDPVLVGFE 842


>gi|95930349|ref|ZP_01313086.1| exodeoxyribonuclease III [Desulfuromonas acetoxidans DSM 684]
 gi|95133601|gb|EAT15263.1| exodeoxyribonuclease III [Desulfuromonas acetoxidans DSM 684]
          Length = 270

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 80/312 (25%), Gaps = 75/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N L                 + +  ++        D++ LQE   ++     
Sbjct: 1   MKIISFNVNGL----------------RARHHQVKAVIDTYQPDVLALQETKVHDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +  R      H  +A+  +   V  Q                R
Sbjct: 41  ------QFPLAEVESLGYEVRYYGQKGHYGVALLSRQAPVDVQ-----YGFVDDDDEAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +        + + V++       F      +++       +  + L+  +   +    
Sbjct: 90  RLIVGRYAFGDQMVTVVN-----GYFPQGENRSHAVKFPAKEKFYRDLRQMLENYEAKND 144

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                         +L     + +++        F     
Sbjct: 145 ALLVVGDMNVAPLAEDIGIGPDNEKRWLAQGKSCFLPEERAWLQSVMDWGLHDSFRHCYP 204

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +  Q                  D      ++
Sbjct: 205 DVDDRFSWFDYRSRGFERDPKRGLRIDLILASQALISRCQDAGI-------DYDIRAMEK 257

Query: 292 LSDHCPISIDYD 303
            SDHCPI  ++ 
Sbjct: 258 PSDHCPIWAEFS 269


>gi|262273941|ref|ZP_06051753.1| endonuclease/exonuclease/phosphatase family protein [Grimontia
           hollisae CIP 101886]
 gi|262221751|gb|EEY73064.1| endonuclease/exonuclease/phosphatase family protein [Grimontia
           hollisae CIP 101886]
          Length = 348

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 90/336 (26%), Gaps = 51/336 (15%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWK---NSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           A  A  ++L + N+    E  G         S  +       L +Y  +   DI+  QE+
Sbjct: 11  AHSALGLKLATINLFNFIEPPGAYYEFCNIYSEDQWRQKRAWLNRYIGSYQPDIIAFQEV 70

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQSYPLL 131
            S +A+  +     +  F++        +          +A R      + +        
Sbjct: 71  FSASALKALLEPLGYR-FFAVVDEPEPLEEYIYKSPVVCLASRYPILSALPLQADPAVSA 129

Query: 132 GAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSP--------SCS 182
                     +R  +   +E+    +  +  +HLKS   +       S            
Sbjct: 130 KLGIHEHFQFSRLPLFATLELPSLGQTDMYVVHLKSKRPVMDEVTEDSEPKKLADSMQEE 189

Query: 183 LLSQQAQWLKD----------WITQKKESLVPFVIAGDFNRKINY--------------- 217
           +    A  ++            I ++  +  P ++ GDFN  +                 
Sbjct: 190 IFGSWASAIQRGSEACHLMSSVIKRRSHTNNPAIVMGDFNDDLRSEVLRAFHISGLRSIT 249

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVMDQNAYKFLIQE 273
               D        +DS   + K            +        +DY ++           
Sbjct: 250 DDMADMPLSHYQLHDSWDLYTKNMGETALERPATHYFHAKGAVLDYILLSSEFNSADPVS 309

Query: 274 SFSEILYNEDDIK------SRGKRLSDHCPISIDYD 303
                 ++ +D              SDH  +S+   
Sbjct: 310 LAEVGDFHCEDTHLVNPKYDHDTYSSDHAIVSVTIS 345


>gi|237749180|ref|ZP_04579660.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes
           OXCC13]
 gi|229380542|gb|EEO30633.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes
           OXCC13]
          Length = 264

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 91/300 (30%), Gaps = 60/300 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81
           ++R+ ++NI+  +  +   +              L++  ++L AD++FLQE+   + +  
Sbjct: 2   ELRIATYNIHKGASIDHRPI-----------IQELKRSIRSLGADVIFLQEVQGRHDLQV 50

Query: 82  ----KVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                ++ +     + + + L   + K    N  H   A+      V Q          S
Sbjct: 51  NRQALLWQEQGQHAYLAGDSLYCAYGKNSVYNYGHHGNALLSTYPIVSQ-----FNQDVS 105

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                +R  +  +++    K++   IHL  F                  +Q + L   + 
Sbjct: 106 DHALESRGILHCVLQTPETKVYCYVIHLGLFNGS-------------RIRQTRALIRTVQ 152

Query: 197 QKKESLVPFVIAGDFNRK-------INYLGNNDDFWKTID--PNDSLIRFPKEKDSRCNA 247
                  P +IAGDFN         +       + +  +D   N     FP+        
Sbjct: 153 ASAPKDAPVIIAGDFNDWNNKLSGFLMRTLQVKEVFDELDMKQNGKRSYFPRLTGQVPKP 212

Query: 248 NKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         +D   +            F     +          LSDH P+    
Sbjct: 213 VAARTFPALFPFFRLDRIYVRG----------FEVDSASVMQGSP-WTSLSDHAPLVASL 261


>gi|86747929|ref|YP_484425.1| 5'-nucleotidase [Rhodopseudomonas palustris HaA2]
 gi|86570957|gb|ABD05514.1| 5'-nucleotidase [Rhodopseudomonas palustris HaA2]
          Length = 2667

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/344 (11%), Positives = 87/344 (25%), Gaps = 68/344 (19%)

Query: 21  AQKVRLVSWNINTLSEQ----------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
              +++  +N+    +                  ++        T L +    +D D++ 
Sbjct: 626 GGSLKVAGFNVLNYFKTLDIGSATTVIGEDPRGADTAAELARQTTKLVETILKMDVDVLA 685

Query: 71  LQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVR 122
           L E+ +        NA+  +  +        T   +N  ++    D I      R  +V+
Sbjct: 686 LTELENDFLPGSSGNAIEYLVAQLNAEAGAGTYAWVNPGQQFVGGDAIAVGFIYRTADVK 745

Query: 123 VLQQSY-------------------PLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLD 161
           +   +                                 +R A+ +  E    G+    + 
Sbjct: 746 IADGTTVEILNDSDLPGLGLSGLLSQSTVGHIFDGENTSRNALAVTFEQISTGETFTAIA 805

Query: 162 IHLKSFCFLDSLENTYSPSCS-----LLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRK 214
            HLKS     +  +                    L  W             ++ GDFN  
Sbjct: 806 NHLKSKSGTGTGADADQGDGQGNWQNQRELATVALTAWAQSDPTGSGDSDVLLLGDFNGY 865

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                        ++         ++      +         +DY   + +    +   +
Sbjct: 866 AKEQSIG-----LLEDAGYENLQTRQ--DDAYSYVFDGQTGTLDYAFANDSMGSQVTGVT 918

Query: 275 FSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303
              I  +E D                     R+SDH P+ I  D
Sbjct: 919 TWHINADEADALDYNTDYGRDTAIFDGTEPVRVSDHDPVIIGLD 962


>gi|332184956|ref|ZP_08386705.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas
           sp. S17]
 gi|332014680|gb|EGI56736.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas
           sp. S17]
          Length = 231

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 78/280 (27%), Gaps = 54/280 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NI            K        +   +    + +DADIV LQE        + 
Sbjct: 2   IKVASYNIR-----------KGIGADRRRNPDRILDVLREVDADIVALQEADRRFGEREG 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    +S  + I +  +  +   H   + VRK    +  ++  L            
Sbjct: 51  VLPLHLIEDHSDWKPIIYGMKARSLGWHGNTLLVRKSTRVLDFEAIHLPSL-------EP 103

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV   +  +   + ++ +HL               S     +QA  +   +       
Sbjct: 104 RGAVMADLSTDAGILRIVGMHLDL-------------SGLWRRRQAGAILSHLASCL-HQ 149

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+ GD N      G   DF +                    +    R    +D  ++
Sbjct: 150 HPTVMMGDLNEWTRGAGCLRDFARDFT-----------FADTGPSFHARRPIGRLDRIMV 198

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                   +  ++ SDH PI    
Sbjct: 199 SPELRVMACGVHA----------SATSRKASDHLPIWAKI 228


>gi|330960376|gb|EGH60636.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 261

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 88/296 (29%), Gaps = 52/296 (17%)

Query: 15  PCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           P T   A   + +++ N++                        LR+  +++ ADIVFLQE
Sbjct: 10  PVTPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRSVSADIVFLQE 59

Query: 74  MGSYNAVA----KVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +           K +P  +   F +     +  + +     D     A+  K   +  ++
Sbjct: 60  VHGEQQSHARSVKGWPTISQYEFLADAMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHEN 119

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             +            R  +  ++++      V  + +    F            S   QQ
Sbjct: 120 LDISIDG-----TEQRGLLHCILDVPNAG-RVHAVCVHLGLF-----------ESHRRQQ 162

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + L + + +      P ++AGDFN               +        F +   +   +
Sbjct: 163 LKLLAELMAR-LPEGEPVIVAGDFNDWRQRAD------ALLQGTGLYEVFVEHFGAPAKS 215

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  + +D   +  +        S                 LSDH P++++  
Sbjct: 216 FPARLPLLRLDRVYVRNSTSHRPKVLS-----------SRPWSHLSDHAPLAVELT 260


>gi|327541485|gb|EGF28020.1| Endonuclease/exonuclease/phosphatase [Rhodopirellula baltica WH47]
          Length = 358

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/346 (11%), Positives = 93/346 (26%), Gaps = 45/346 (13%)

Query: 1   MIRKYVLALVFFLVPCT-----ASVAQKVRLVSWNINTLSEQEGVSLWK--------NSV 47
           M   ++LAL +  +        A    +  +++WN+    + +               S 
Sbjct: 11  MRLLFLLALTWHFISGFGSVAIAQQPAEFSVMTWNLEWFFDNQTADNPSELGREKSAPSR 70

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
            +       +      +   +V LQE+ S N +  +            +  +     D  
Sbjct: 71  GQWDWRRDRVAAAIAKVQPTVVALQEIESQNVMYFLTRAIDRNHGLKYDDYV-IKGEDFY 129

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS 166
            +   A+               +  +  S   A   + +  +VEI    K  +L I    
Sbjct: 130 TEQDVALLATTTTGVQSISRGVVTPSMKSRGYASVSKHLFAVVEIPVNGKTELLVIANCH 189

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWIT---QKKESLVPFVIAGDFNR-----KINYL 218
              +       +     L    + +   +    +  +  V  ++ GDFN      KI+  
Sbjct: 190 LRAMAEKGELRAKQARTLGLWLERMVAGVKASQENPDQPVHVLVTGDFNTEELAGKISPD 249

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNA---YKFLIQES 274
            +        + + S                         D  ++ ++       ++  S
Sbjct: 250 SDLGVLMSRGNDDPSDDLVDLHDYIPAQNRTTHLLPGRQFDRILVSRDLVIDTPGVVDLS 309

Query: 275 FSEILYNEDDIK------------------SRGKRLSDHCPISIDY 302
             ++    D                        + +SDH P+   +
Sbjct: 310 LRDVTVRSDLNFGGDQDTQDEHWNNYWGIADDQRDISDHNPVLARF 355


>gi|326798886|ref|YP_004316705.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326549650|gb|ADZ78035.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 378

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 98/309 (31%), Gaps = 63/309 (20%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             +  +R++++N++   +++     K          T + +   ++  DIV +QE  +  
Sbjct: 108 PDSSSIRVLTYNVHLFRKEDQDVRPKTK--------TAVTELILSVSPDIVCMQEFYTRK 159

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                  +N       +    +    +        + +  +       S P    K + +
Sbjct: 160 KGKYNSRQNMAPALGLSYSYFHPVVENEY--EAYGLIILSRYPIKNAGSIPNYQGKRTLN 217

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE-----------------------N 175
           R     A+   +  NG+   V +IHL+S  F                            +
Sbjct: 218 R-----AIYADIVKNGRAFRVYNIHLQSIGFQPQDYAFVKDVKSRSFENDNVASTKRIGS 272

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               +    S+QA+ +K+ I + ++   P +I GDFN            +     +  L 
Sbjct: 273 RLKHAFFERSEQAKRIKEEINRCRK---PVIITGDFNDTPLS-------FAVHTVSSDLN 322

Query: 236 RFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              ++K +      N       IDY +  +               +     +   K+LSD
Sbjct: 323 NSFEKKGAGWGITYNGEFPNFQIDYILSSK--------------TFEVKHYQILKKKLSD 368

Query: 295 HCPISIDYD 303
           H  +  D  
Sbjct: 369 HYAVWSDLS 377


>gi|323344686|ref|ZP_08084910.1| hypothetical protein HMPREF0663_11446 [Prevotella oralis ATCC
           33269]
 gi|323093956|gb|EFZ36533.1| hypothetical protein HMPREF0663_11446 [Prevotella oralis ATCC
           33269]
          Length = 270

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 92/314 (29%), Gaps = 75/314 (23%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           Y+L  +F  +P   + AQ+++++++NI +         +               +   N 
Sbjct: 7   YILTALFLALPFIGN-AQELKIITFNIRSFEPDFNTQPY--------------AELLWNE 51

Query: 65  DADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSN 107
             D+V L E+ + ++  +                 +F    +    S +   N  +    
Sbjct: 52  KPDVVCLNEVENRSSRQQFDGKYRDVVQDLANRIHLFGLFGYSYNLSNKDGKNPEENYKY 111

Query: 108 -NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLK 165
             +     A+  +   +   +  L     S   A  R  V   + +  GK I V   HL 
Sbjct: 112 CENELYGNAILSRYPILNVSTIQLPRPTGS---ADQRGVVIADILLPEGKIIRVACTHLD 168

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                               +QA  L     + K +  P ++ GD N   N         
Sbjct: 169 HVGG--------------QLEQAAVLTS--DEVKSNTYPTILCGDMNVGPNSDVIKKLL- 211

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                               ++   L     ID+ +  +          +        D 
Sbjct: 212 ------------TVYDRLDNDSGTYLGL-SKIDFILGTKG--------KWELKSCKVLDR 250

Query: 286 KSRGKRLSDHCPIS 299
              GK LSDHCP+ 
Sbjct: 251 HLNGKELSDHCPVV 264


>gi|294674945|ref|YP_003575561.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
 gi|294472469|gb|ADE81858.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
          Length = 364

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 84/311 (27%), Gaps = 69/311 (22%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                   ++L+S+N+                 +    +  + +Y    DADIV LQE  
Sbjct: 93  SQTPPEGTIKLISYNVCQYGGNY----------KYEQGFEKVHEYLTEQDADIVCLQEDV 142

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                   + +     +       + +  +  +     + +  K   + ++  P   + +
Sbjct: 143 DT------WRRYVKQWYEKIYPYNDTTIFNPQDACINGVGIHTKYPIIRKERIPYESSGN 196

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS--------------- 180
                         +++    + V++ HL+     +   + Y                  
Sbjct: 197 GSVAYF--------LQVGNDTVLVINNHLEGTHLSNEDRDKYKQMISGKMKKYTAKAETL 248

Query: 181 ---------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                     +  + +A+ + D+I        P ++ GDFN                   
Sbjct: 249 FLIEKLGKYAAKRAPEAEAVHDYIEAH--RHYPIIVCGDFNDNPISYSRRTI------AQ 300

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                + +       +       + ID+ ++  +         F     + D        
Sbjct: 301 GLTDCYQETGKGIGLSYNQKGFFVRIDHILVSDH---------FEPYNCHIDSKMD---- 347

Query: 292 LSDHCPISIDY 302
            SDH PI    
Sbjct: 348 ASDHNPIICTL 358


>gi|255035926|ref|YP_003086547.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
 gi|254948682|gb|ACT93382.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
          Length = 260

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 72/304 (23%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R+ ++N+N ++                    +L ++      D+V LQE        
Sbjct: 2   NAMRIATYNVNGVNG----------------RLPVLLRWLTETTPDVVCLQE-------- 37

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                              +            +A+  +     +    L G  +      
Sbjct: 38  --LKAPQEKFPEQAILEAGYKAIWHGQKSWNGVAILSRGDIPAEIRRVLPGDPEDAHSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +E     + V  ++L +       +  Y        +    L         +
Sbjct: 96  --------IEAEIGGLTVGGLYLPNGNPAPGPKFDYK------LRWFDRLITHAQGLLAA 141

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++ GDFN     L                     +  +                  
Sbjct: 142 GKPVLLTGDFNVMPTELDVYKPESWVDDALFRPETRAAFAKLMDQGWTDAIRTLYPDEKI 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+F++  N    LI           D      ++ SDH P+
Sbjct: 202 YTFWDYFRNAFARNAGLRIDHFLLSPNLAPRLIAAGV-------DKQVRGWEKTSDHAPV 254

Query: 299 SIDY 302
            I+ 
Sbjct: 255 WIEL 258


>gi|229820664|ref|YP_002882190.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
 gi|229566577|gb|ACQ80428.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
          Length = 269

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 68/291 (23%), Gaps = 34/291 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +R++++NI        V+ W        +              D+V LQE+ S+  
Sbjct: 5   QGTPLRVMTFNIKYDDAASPVAAWAPRRAAVAATIR-------AAAPDVVGLQEVQSHQL 57

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    +                    +  A     +         P + ++ +   
Sbjct: 58  ADLRADLPEYEAVGVGRDDGAAGGEHVPLLVRRAAWRIAEWGTFWLSETPAVPSRFA-GT 116

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R     ++E          I + +        +  +    ++    +          
Sbjct: 117 TFPRTCTWAVLEPVDGAGRAGSIGVWNVHLDHESTDAQAFGLRVVLDAVRE--------- 167

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-------R 252
              VP V+ GD N                D        P       +             
Sbjct: 168 RGDVPAVVLGDLNAGPRTEPLAVVAGALHDARTRSRTAPTGPGGTFHDWVPDAVADTAGD 227

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +   ID+ ++               + Y+           SDH P+ +D  
Sbjct: 228 DDSRIDHVLVSDA---------VGVVAYDVPVPGPGVVP-SDHLPVVVDLT 268


>gi|170694716|ref|ZP_02885867.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
 gi|170140347|gb|EDT08524.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
          Length = 258

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 83/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +++ +WN+N+L                      +  + +    D++ LQE+         
Sbjct: 1   MKIATWNVNSL----------------KVRQQHVIDWLETSGTDVLCLQELKLPDEKFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +  +++ ++  N             I VR             +   D   +  
Sbjct: 45  AELEEKGYRSWFAGQKTYN----------GVGILVRAGLNVDEASVVRNIPGFDDLQQR- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               V   VE     + ++  +  +     + +  Y        +    L DW+  +   
Sbjct: 94  ---VVAATVE----GVRIISAYFPNGQAPGTDKFAYK------LRWLAALHDWVKSEMAL 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIR----------FPKEKDSRCNA 247
                + GD+N   +    +D         + P +                ++ +     
Sbjct: 141 YPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEFVRLIELGLVDAFRQFEQPEKI 200

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++ +   +              D +  +  + SDH P+
Sbjct: 201 YSWWDYRMMAFRRNAGLRIDHILLSKALAETCASCEV-------DKVPRKWDQPSDHAPV 253

Query: 299 SIDY 302
               
Sbjct: 254 VAQL 257


>gi|16127936|ref|NP_422500.1| exodeoxyribonuclease III [Caulobacter crescentus CB15]
 gi|221236757|ref|YP_002519194.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000]
 gi|13425472|gb|AAK25668.1| exodeoxyribonuclease III [Caulobacter crescentus CB15]
 gi|220965930|gb|ACL97286.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000]
          Length = 268

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 79/305 (25%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                          ++      D++ +QE+         
Sbjct: 3   LRIATWNVN----------------SVRLRAEQAARFVDEQAPDVLCMQEIKCQEGE--- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +        +     + +       +A+  +       +                
Sbjct: 44  FPREAFEA------MGLPHLKIAGQKGWHGVAIASRLPIEDVPTLMTCREGH-------- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  + V++ G +I     +       D+ +   +P         + L   + ++ +   
Sbjct: 90  -ARCVAVKVAGVEIQ----NFYIPAGGDTPDRIGNPKFDHKLDFYETLTAALKKR-DPKA 143

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                   +     + F   I   D L             
Sbjct: 144 PLIVTGDLNIAPGENDVWSHRQMLKVVSHTPPELEAFDALIKSMDLLDLPRLATPEPQKL 203

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+ +           +   ++     D     +R SDH P
Sbjct: 204 FSWWSYRAADFRKSNRGLRLDHILASPGLRDAASLDG--KVSSRVHDDVREWERPSDHAP 261

Query: 298 ISIDY 302
           ++ D 
Sbjct: 262 VTADL 266


>gi|254247764|ref|ZP_04941085.1| Exonuclease III [Burkholderia cenocepacia PC184]
 gi|124872540|gb|EAY64256.1| Exonuclease III [Burkholderia cenocepacia PC184]
          Length = 258

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 79/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +    +    +  +A+  +    L      +           +
Sbjct: 35  LKLPDEKFPRADLEAVGYRSWFTGQKTYNGVAILVR--DTLAVDESDVVRNIPGFDDPQQ 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V+     + ++  +  +   LDS +  Y        Q    L+ W+  + +   
Sbjct: 93  RVIAATVD----GVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLRTELQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLIELGFVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D      ++ SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSPALAATCASCEV-------DRTPRTWEQPSDHTPVVA 255


>gi|261408787|ref|YP_003245028.1| exodeoxyribonuclease III Xth [Paenibacillus sp. Y412MC10]
 gi|261285250|gb|ACX67221.1| exodeoxyribonuclease III Xth [Paenibacillus sp. Y412MC10]
          Length = 250

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 75/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L                         Y    DADI  +QE        ++
Sbjct: 1   MKLVSWNVNGLRACVTKGFM---------------DYFNEADADIFCVQETKLQAGQIEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S       I                   +    +  S    R
Sbjct: 46  DLGPEYQQYWNYAEKKGYSGTAVFTRIA---------------PLSVRYGLEEDSEPEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  ++++++  +     S  +               L        +   
Sbjct: 91  -----VITLEFEGFYLVNVYTPNAKRDLSRLDYRLEWEERFRTYLLQL--------DERK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                        +     +  F      R +  
Sbjct: 138 PVIVCGDLNVAHQEIDLKNAKSNHGNSGFTLEERGKMTDLLAAGFIDSFRHFYPDRTDVY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+      + L        +             SDHCP+S
Sbjct: 198 SWWSYMAKVRERNIGWRIDYFLTSARLAEKLKDAEIDCHVL-----------GSDHCPVS 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 LTLE 250


>gi|148653062|ref|YP_001280155.1| exonuclease III [Psychrobacter sp. PRwf-1]
 gi|148572146|gb|ABQ94205.1| Exodeoxyribonuclease III [Psychrobacter sp. PRwf-1]
          Length = 271

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 79/314 (25%), Gaps = 79/314 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
           R VS+NIN +  +                   +R      D D++ LQE  +       +
Sbjct: 3   RFVSFNINGIRAR-------------QHQLEAVRDII---DPDVMGLQETKVHDEQFPLE 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     + +                   H  +A+  K   +  Q     G  D    A  
Sbjct: 47  LVESLGYHV------------EFFGQKAHYGVALVSKVKPIFVQK----GFPDEPEDAQK 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +      NG+++ VL+       F       +     +       L  +I   K   
Sbjct: 91  RF-IHARYVFNGQEVDVLN-----GYFPQGESRNHETKFPMKRAYYADLNQYIDALKAEG 144

Query: 203 VPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEK 241
              +I GD N                               +++  +   +    +    
Sbjct: 145 RTLIIMGDMNIAPEDNDIGIGEKNAKRWLSQGKTSFLPEEREWYSALMSRELSDTYRIHY 204

Query: 242 DSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +       +             ID+ +  Q+     I                  +
Sbjct: 205 PDANDTFSWFDYRSRGFDDDPKRGLRIDHILCTQDIEDKCIDAGI-------SYELRAME 257

Query: 291 RLSDHCPISIDYDF 304
           + SDH PI   + F
Sbjct: 258 KPSDHAPIWASFKF 271


>gi|83718841|ref|YP_442378.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
 gi|167619376|ref|ZP_02388007.1| exodeoxyribonuclease III [Burkholderia thailandensis Bt4]
 gi|257138580|ref|ZP_05586842.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
 gi|83652666|gb|ABC36729.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
          Length = 258

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 84/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ +WN+N+L+                     +  +    D D++ LQE  +       
Sbjct: 1   MRIATWNVNSLN----------------VRKQHVLDWLAQSDVDVLCLQELKIPDEKFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      +  +++ ++  N            AI  R             +     F    
Sbjct: 45  EALEAAGYRSWFAGQKTYN----------GVAILARASLPFDETDVVRNIPG---FEDTQ 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +   ++     + ++  +  +   LDS +  Y        Q    L+ W+  + + 
Sbjct: 92  QR-LIAATID----GVRIVSAYFPNGQALDSDKFVYK------MQWLDALQAWLKNELQR 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNA 247
                + GD+N        +D         + P +                +  D     
Sbjct: 141 YPKLALLGDYNIAPEDRDVHDPSKWEGQNLVSPQERAHFAQLVALGFVDAFRRFDQPEKT 200

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++     +     +        D      ++ SDH P+
Sbjct: 201 FTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRAPRAWEQPSDHTPV 253

Query: 299 SIDY 302
               
Sbjct: 254 VAQL 257


>gi|227485102|ref|ZP_03915418.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227236935|gb|EEI86950.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 353

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 96/319 (30%), Gaps = 64/319 (20%)

Query: 23  KVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             ++++WNI               G  +   S     +    + +  K ++ D++FLQE+
Sbjct: 54  PYKILTWNIGYGGLDKDTDFFMDGGKMVNPISKDHVENALAGISKEIKTINPDLLFLQEV 113

Query: 75  GSYNAVAKVFPK---------------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            + +       +                 + + +    +    K +S     +   +   
Sbjct: 114 DADSQRTYHINEVEYFDKELNGASTFAFNYKVGFVPFPIPPMGKVNSGIFTKSKFEIESS 173

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                   +       +  R  N  A  L +E + K + ++++HL ++    +       
Sbjct: 174 YRYQQPVPHKWPVRLANLKRGFN--ASYLPIEGSDKYLVLVNVHLDAYESGSNG------ 225

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFW 225
                  Q + +  ++T++       ++ GDFN+++                    D   
Sbjct: 226 ----RLAQTKQIIAFMTEEYNKGNYLIVGGDFNQELRKGYEANVPEGIWNPSPFPYDYLT 281

Query: 226 KTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
             I P  +                 N   +  ID F++  N     ++      +     
Sbjct: 282 DNIKP--TFDENTNSSRLNHKPYDPNDSYECIIDGFLVSDNVEVKSVKGQAIGFVN---- 335

Query: 285 IKSRGKRLSDHCPISIDYD 303
                   SDH P+ +++ 
Sbjct: 336 --------SDHNPVLLEFS 346


>gi|254436254|ref|ZP_05049761.1| exodeoxyribonuclease III [Nitrosococcus oceani AFC27]
 gi|207089365|gb|EDZ66637.1| exodeoxyribonuclease III [Nitrosococcus oceani AFC27]
          Length = 254

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 89/304 (29%), Gaps = 76/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                   ++ +  + +    D++ LQE      V   
Sbjct: 1   MKIATWNVNSL----------------RVRFSQVVDWLEIHQPDVLALQE---TKLVDDS 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRAGN 142
           FP+  +           +    S    +  +A+  +   + +    P L           
Sbjct: 42  FPQEAFKEI-------GYHAAYSGQKTYNGVAILCRQAPKDILTDLPNLVDS-------Q 87

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR + + V+     I +L++++ +   + S +  Y             +KD++ +     
Sbjct: 88  RRILGVTVD----DIRLLNLYVPNGSEVGSKKYAYKLD------WLGRIKDYLQEALVEY 137

Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GDFN        +D                  K I          +  +    +
Sbjct: 138 PKLIVLGDFNVAPADQDVHDPDIWHETILCSTPEREALKEILALG-FQDSFRLFEQEAQS 196

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID  ++ +                  D    R  R SDH P+
Sbjct: 197 FSWWDYRGGAFRRNRGLRIDLILISKALVPKCTGCVI-------DKEPRRLTRPSDHAPV 249

Query: 299 SIDY 302
              +
Sbjct: 250 IATF 253


>gi|46127109|ref|XP_388108.1| hypothetical protein FG07932.1 [Gibberella zeae PH-1]
          Length = 309

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 83/305 (27%), Gaps = 17/305 (5%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M    +LA    +     S    VRL+++NI  L+        +    R     + L   
Sbjct: 1   MRFDILLAGAVAVAAAPLSRTTDVRLMTYNIR-LAPNHPERGEELWPVRRPRLVSQLNFE 59

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                  +V +QE                  +Y   R   +    S      ++   + +
Sbjct: 60  TSGRPESLVCMQEATYPQIQDLQEDLGDEWDYYGVGRKGGNRGEFSPIFYRPSVWNMEDS 119

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                 S P       +  A  R       +       ++ +      F    +     S
Sbjct: 120 KTYWLSSTPHKVGSRGWDAAFPRIVTVARFQHISTGNRLVYMCTH---FDHKGKTARENS 176

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             L+S  A+      +      VP  I GD N   +            D    +    + 
Sbjct: 177 AKLISATAEE----WSSYGFDNVPVFIGGDLNSSPDEPAYKHLASAMNDVKSIIPLAKRF 232

Query: 241 KDSR---CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             S         +  + + +D+  +   +       +    LY        G  +SDH P
Sbjct: 233 GHSSYTYTGFTVSPSDDMDLDHIFVKDTSGLQFKSFAVLNNLY------EDGVFISDHRP 286

Query: 298 ISIDY 302
           + +D 
Sbjct: 287 VVVDL 291


>gi|320335581|ref|YP_004172292.1| endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM
           21211]
 gi|319756870|gb|ADV68627.1| Endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM
           21211]
          Length = 309

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 81/292 (27%), Gaps = 70/292 (23%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           VP  +  ++  RL+++NI                 R T     L +     + D+V LQE
Sbjct: 83  VPSPSPGSRSFRLMTYNI----------------ARGTGGAAELARVISRAEPDVVCLQE 126

Query: 74  MGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
             +     +  +  +                            A  +    V+   +P+ 
Sbjct: 127 TNTVLPGVLRDLERRLP------------------------GYAAARSREVVVLSRFPVT 162

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           G +D       RR +   V + G+ + +L++H  +  +               + Q + +
Sbjct: 163 GVQDRALPDTTRRLLRATVRVRGQPVTLLNLHFTTVLWRGGWAGARDR----RAAQVRAV 218

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                Q +    P V  GDFN                        F +            
Sbjct: 219 LQVARQTRG---PVVACGDFNTPP------RGLVDAALREQFSNAFAQAGAGFGYTFPAR 269

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              + ID+  + + +                        R SDH P+ +D  
Sbjct: 270 APLVRIDHVWLRRASAVA---------------AFVPDARASDHRPLVVDVT 306


>gi|319405904|emb|CBI79536.1| exodeoxyribonuclease III [Bartonella sp. AR 15-3]
          Length = 260

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 91/302 (30%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNI                    + +  L ++ K    D+V LQE+   +     
Sbjct: 1   MKIVTWNIAG----------------IKARHETLCKWLKQNQPDVVCLQEIKCIDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +T   + +            +A+  K +        +       +    R
Sbjct: 41  ------NFPRNTIEDLGYHVETHGQKSFNGVAILSKKIP----DEIICRLPGDHNDKQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   N   I V  ++L +   ++S +  Y       ++  + L        E   
Sbjct: 91  Y-IEAVYSTNKGSIRVASLYLPNGNPINSEKYFYK------TEWMKRLYTHAKSLLEYEE 143

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N     L                   + ++ I             D+   + 
Sbjct: 144 PLILAGDYNVIPTSLDAKNPQEWNNDALFLPQIREIFQCITHLGFYDAIRNVTDTPSFSF 203

Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +         N I ID+ ++   A   L       I           ++ SDH PI ++
Sbjct: 204 WDFQANAWKKNNGIRIDHLLLSPEAADQL-------ICAYSQTEVRGYQKPSDHIPIWVE 256

Query: 302 YD 303
            +
Sbjct: 257 LN 258


>gi|260426641|ref|ZP_05780620.1| exodeoxyribonuclease III [Citreicella sp. SE45]
 gi|260421133|gb|EEX14384.1| exodeoxyribonuclease III [Citreicella sp. SE45]
          Length = 260

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 86/301 (28%), Gaps = 67/301 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   + +  L  +      D+  LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------IKARHAALLDWLDEAQPDVALLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +           ++           +A+  K              +D  +R    
Sbjct: 42  FPREPF-------EERGYNVETHGQKGFNGVAILSKLPLEDVTRGLPGDDEDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V      + +  ++L +       +  Y  +        + L+          +
Sbjct: 92  --IEATVVGETHALQLCGLYLPNGNPAPGPKYDYKLA------WMERLEARARALLADEM 143

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++AGD+N                           F + ++   +     +  +    +
Sbjct: 144 PAMMAGDYNVIPQAEDAAKPESWTEDALYLPQTRAAFRRILNLGFTEAFRTRHPEPGHYS 203

Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +         N I ID+ ++   A   +            D       + SDH P+ +
Sbjct: 204 FWDYQAGAWQRNNGIRIDHILLTPQAADLMRDVQI-------DRDIRGRDKPSDHVPVWV 256

Query: 301 D 301
           D
Sbjct: 257 D 257


>gi|146297840|ref|YP_001192431.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
            UW101]
 gi|146152258|gb|ABQ03112.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
            UW101]
          Length = 1133

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 96/323 (29%), Gaps = 40/323 (12%)

Query: 10   VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
            +  L   +   +    +V++N+             +   +         +    LDAD+ 
Sbjct: 722  IGSLTGSSLPKSDTFDVVTYNMEFFGAPTSAYGPADKALQ----MQNAVKVINKLDADVY 777

Query: 70   FLQEMGSYNAVAKVF-----------------PKNTWCIFYSTERLINHSKRDSNN---- 108
             +QE+ S  A+  +                     +W    S             +    
Sbjct: 778  VVQEISSDAAIDDLITQMNVNGKSFNKVVSTSWSYSWETNPSDPNYPPQKLVVIYDTKTT 837

Query: 109  ---DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIH 163
               +           +R   +S       +S   +  R    + +E  +NG K  +  + 
Sbjct: 838  TLKNTRVMFKEFYDELRAGTKSLTNYPGTNSNFFSSGRLPYMVTLETNLNGVKNEIKFVD 897

Query: 164  LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-- 221
            L +     +  + Y+    +     + LKD +          ++ GD+N  +        
Sbjct: 898  LHARANSGTDISRYN----MRKYDVEVLKDSLDTHYGDSN-IILLGDYNDDVKASVIAGQ 952

Query: 222  -DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
               +   +   ++      E  S+  A   L +   +D+  +    +   I ES +    
Sbjct: 953  PSSYQSFVTDTNNYKALTLEI-SQAGAYSFLSSGGFLDHITISNELFDQYINESIAVYDP 1011

Query: 281  NEDDIKSRGKRLSDHCPISIDYD 303
              D I +     SDH P+   ++
Sbjct: 1012 RND-IANYTTTTSDHGPVIARFN 1033


>gi|332519237|ref|ZP_08395704.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4]
 gi|332045085|gb|EGI81278.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4]
          Length = 361

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/351 (11%), Positives = 92/351 (26%), Gaps = 58/351 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK------VRLVSWNINTLSEQEGVSLWK---------- 44
           M    +L L+ FL P  +  AQ+        +  +N+  L + E                
Sbjct: 11  MNNLRLLFLIAFLTPFISVNAQEEKTYKIHTVAFYNLENLFDTENDPEKNDEASPMMEIK 70

Query: 45  -NSVKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96
            +           + +   ++          ++ + E+ +   +  V       +  + +
Sbjct: 71  ADRENIYKRKVHNMARVIADIGTETTGNAPALLGICEVENIKVIEDVANDP---LLLAKD 127

Query: 97  RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEING 154
             I H +      I   +  +K   + + +S   L   D  +R     R  + +  E+ G
Sbjct: 128 YGIVHFESPDRRGIDVGLMYQKDLFQPISKSSHTLKIYDDQTRKRVYTRDQLLVSGELEG 187

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
             + ++  H  S    ++   +     + L+++       I    +     +  GD N  
Sbjct: 188 DLVHIIVNHWPSRSGGEARSRSKRIGAAKLNKRIIDSLQSIDPYAK----IITMGDLNDD 243

Query: 215 INYLGNNDDFWKTIDPNDSL------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                  D         D              K                D  ++ +   +
Sbjct: 244 PTNASVKDVLKAKRKKKDVKVKGIYNPYINMFKKQGLGTTAYRDAWSLFDQIMVTKPLIE 303

Query: 269 ------FLIQESFSEILYNEDDIKSRGKRL-------------SDHCPISI 300
                    +       Y  +                      SDH P+ I
Sbjct: 304 EDFSSFRYYKAGIYNKNYLTNKRGRYKGYPLRSFADGGFTDGFSDHFPVYI 354


>gi|327403479|ref|YP_004344317.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
 gi|327318987|gb|AEA43479.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
          Length = 343

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 107/351 (30%), Gaps = 67/351 (19%)

Query: 2   IRKYVLALVFFLVPCTASVAQK------VR------LVSWNINTLSEQEGVSLWKN---- 45
           ++KY L  +   V      AQK      ++      +VS+N+  L +        +    
Sbjct: 1   MKKYTLFFLLISVCSVNGFAQKNPKKGALQSFHQRAIVSYNVENLFDTIDDKGVIDEEFL 60

Query: 46  -------SVKRTTSDYTLLRQYAK---NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95
                  + +R       L +        +  I+ L E+ +   +  +           T
Sbjct: 61  PDGKLKWNSQRYQLKLDHLVEAITMNLTENPVIIGLVEIENAGVIKDLKNTGR---LAKT 117

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NG 154
           +  I H        I   +   K+  ++++    L  + DS S    R  + +  E+  G
Sbjct: 118 KYEIAHKDSPDARGIDCGLLYDKERFKLIKMET-LTVSIDSISDFKTRDILVVKGELQGG 176

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           K I++   H  S    +  E     +  +   +   +        +     ++ GDFN  
Sbjct: 177 KIIYLFVNHWPSRRGGEGSEIRRIQAAKVARAKVDEILK-----ADPKANIILMGDFNDH 231

Query: 215 INYLGNNDDFWKTI---DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
            N +   D            D L  F  +  +    +        +D+F++ +     + 
Sbjct: 232 PNNISIQDVLKAKDVSDSSADLLDLFADDHKAGKGTHNYKNEWGVLDHFIVSRA----IY 287

Query: 272 QESFSEILYNEDDIKSRGKRL------------------------SDHCPI 298
             S    L+  D I    ++L                        SDH PI
Sbjct: 288 SGSNGVALFPNDGIIVYEEKLLFTQKDGSKKPSTTYGGPNYYGGYSDHLPI 338


>gi|47568231|ref|ZP_00238934.1| exodeoxyribonuclease III [Bacillus cereus G9241]
 gi|228986876|ref|ZP_04147003.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|47555059|gb|EAL13407.1| exodeoxyribonuclease III [Bacillus cereus G9241]
 gi|228772825|gb|EEM21264.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 252

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 86/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQDGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEEYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFEDFYIITLYTPNSKRGLERLDYRMKWEDDFRVYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +     ++  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPNQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|148656942|ref|YP_001277147.1| endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1]
 gi|148569052|gb|ABQ91197.1| Endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1]
          Length = 1641

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 93/332 (28%), Gaps = 54/332 (16%)

Query: 21  AQKVRLVSWNI-NTLSEQEG----------VSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
              +++ ++N+ N  +   G                +          L Q    LDA+++
Sbjct: 522 GGDMQVAAFNVLNYFNTFTGCTLGVGGATTGCRGAENATEFERQNAKLIQAILRLDAEVL 581

Query: 70  FLQEMGS-----YNAVAKVFPKNTW------CIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            L E+ +      +A+A++  +           F   +           + I  A+  + 
Sbjct: 582 GLIEVENDGYGPNSALAELVNRLNAATAPGTYAFIDVDAATGQVNALGTDAIKVALIYKP 641

Query: 119 KNVR-----VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             V       +  +   +   DS  R     A       +G+ + V+  HLKS      +
Sbjct: 642 AVVTPVGQTAVLNTVAFVNGGDSAPRNRPALAQTFRHRASGEDVTVVVNHLKSKGSPCDV 701

Query: 174 ENTYSPSCS---LLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTI 228
            +    S +   +    AQ L  W+            +I GD N        +      +
Sbjct: 702 PDAGDGSGNCNIVRRNAAQELVTWLATDPTGTGDPDILIIGDLNSYAQEDPID-----VL 756

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                             +         +DY +    A   +   S   I  +E ++   
Sbjct: 757 RAAGYTDLARTFVGESAYSYVFNGQWGYLDYALASPPALAKVSGVSEYHINADEPNVLDY 816

Query: 289 G-----------------KRLSDHCPISIDYD 303
                              R SDH PI +  +
Sbjct: 817 NLNFKSVGQQTSLFAPDQYRTSDHDPILVGLN 848


>gi|297539130|ref|YP_003674899.1| Endonuclease/exonuclease/phosphatase [Methylotenera sp. 301]
 gi|297258477|gb|ADI30322.1| Endonuclease/exonuclease/phosphatase [Methylotenera sp. 301]
          Length = 250

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 81/288 (28%), Gaps = 48/288 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----- 76
             +R+ ++NI+                R +          + L AD++FLQE+       
Sbjct: 3   NTLRIATFNIHKGFTHFNA--------RFSLHLQR--DMLRKLQADVIFLQEVQDVHTKH 52

Query: 77  -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                +         +        ++ K       H   AV  K   +   +  +     
Sbjct: 53  TERFASMSTSGQMEFLADEVWSDYSYGKNSVYPAGHHGNAVLSKFPIIKTNNQDISA--- 109

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R  +   + I      +  + +    F                QQ   + ++I
Sbjct: 110 --HATEQRGMLHCEINIPTWDEPLHAVCVHLGLF-----------AQWRRQQLVSVSEYI 156

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            Q   +  P +IAGDFN      G    F + ++ ++    F         +       +
Sbjct: 157 EQHIPANAPLIIAGDFNDWGMRTG--RIFAERLNMHE---VFEHHAGKPAKSFPAWLPML 211

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +D   +     K +   S +              ++SDH  ++    
Sbjct: 212 RLDRIYVRGFNVKHVEVHSGAHF-----------LKVSDHAILTATLT 248


>gi|126668281|ref|ZP_01739241.1| exonuclease III [Marinobacter sp. ELB17]
 gi|126627307|gb|EAZ97944.1| exonuclease III [Marinobacter sp. ELB17]
          Length = 270

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 64/285 (22%), Gaps = 59/285 (20%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +    L    + L+ D + LQE    +               +    + +         
Sbjct: 12  RTRLHQLAAVIEQLEPDFIGLQETKVSDE----------DFPLADIEALGYHVHFHGQKT 61

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           H  +A+  K          +            RR +     +NG+ + V++       F 
Sbjct: 62  HYGVALMSKM-----APDKVYKGFPDDLDNAQRRLITADFTVNGETLTVIN-----GYFP 111

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------ 218
                 +        +    L  ++ + K      V+ GD N                  
Sbjct: 112 QGESRDHPVKFPAKQKFYADLMSYLDELKLRNTKVVVMGDVNISPTDKDIGIGADNAKRW 171

Query: 219 ---------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PID 258
                         +   ++       F        +       +             ID
Sbjct: 172 LRSGKCSFLPEERQWLGEVESRGYTDVFRHLHPHEADTFSWFDYRSKGFDREPKRGLRID 231

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +   N          S  +   D       R SDH P+   + 
Sbjct: 232 LIMASDNLLSQAKSAGVSYDVRAMD-------RPSDHAPVWARFT 269


>gi|307726281|ref|YP_003909494.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
 gi|307586806|gb|ADN60203.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
          Length = 269

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 75/306 (24%), Gaps = 74/306 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
            +R+ ++NIN                   S    L Q+ +    DIV LQE+        
Sbjct: 3   TLRIATFNING----------------IRSRQAALVQWLEREAPDIVCLQELKAADSAFP 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A       +   +                    +A+  K    L+    L G +      
Sbjct: 47  ADALRDADYHAIWH------------GQSAWNGVAILSKGEAPLESRRGLPGFEADTHSR 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               AV          + V  ++L +       +  Y        +    L +      +
Sbjct: 95  YLEAAV--------GGLLVCCLYLPNGNPQPGPKFEYK------LKWFDHLIEHAANLLK 140

Query: 201 SLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC 245
           S  P V+AGDFN                         + ++ +          K      
Sbjct: 141 SGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYQRLLAQGWTDSLRKHFGDER 200

Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                   +          ID+ ++       L            D         SDH P
Sbjct: 201 VYTFWDYFRRHWDTNSGLRIDHILLSPELAPRLRDAGV-------DRWVRGEAHASDHAP 253

Query: 298 ISIDYD 303
             ++ D
Sbjct: 254 TWVELD 259


>gi|297197811|ref|ZP_06915208.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
 gi|197716600|gb|EDY60634.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
          Length = 305

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 85/301 (28%), Gaps = 39/301 (12%)

Query: 12  FLVPCTASVAQKVR----LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            +    AS A+  R    ++++N+   S  E                 ++RQ  +     
Sbjct: 33  LMGTLPASAAKPYRRRLDVMTFNLRFASTSE--------PNSWAVRRPVMRQLLRQEAPT 84

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++  QE      +           +  T R        +     T      ++  +    
Sbjct: 85  VLGTQEGLYQQLLDIHSDLGAHYDWIGTGREGGSHDESTAVFYDTRRLAPVEHDTLWLSD 144

Query: 128 YPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            P +   +++  A  R    +        G++ +VL+ H     F    +     S   L
Sbjct: 145 TPRVVGSNTWGAALPRIVTWVRFRDRAAGGREFYVLNTH-----FDHVSQYARERSAQFL 199

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDS 243
           S++            +   P ++ GDFN + +     D    T +              +
Sbjct: 200 SRRIAEF--------DRTSPVLVTGDFNAEAHDNRAYDTLLATGLVDTWDAAAERSRLYA 251

Query: 244 RCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +  + L      ID+ +              +      +     G+  SDH P+    
Sbjct: 252 TFHGYRPLTPDGDRIDWILATPGT---------TVQRAVINTFAMDGQFPSDHLPVQATL 302

Query: 303 D 303
            
Sbjct: 303 T 303


>gi|237794818|ref|YP_002862370.1| exodeoxyribonuclease III [Clostridium botulinum Ba4 str. 657]
 gi|229261060|gb|ACQ52093.1| exodeoxyribonuclease III [Clostridium botulinum Ba4 str. 657]
          Length = 253

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ SWN+N L      +                 ++      DI+ +QE  +       
Sbjct: 1   MRIYSWNVNGLRAVAKKNF---------------IEWIGEESPDILCIQETKLQENQLEH 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +++  ++S           +    ++ +A   K   +  +    +   DS  R  
Sbjct: 46  NIKNIDSYYSYFS----------FAAKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRI- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    K   +L+I+  +    +                 + L ++  +  + 
Sbjct: 95  --------LITEFKDFTLLNIYFPNGQRDEER-------LQYKLDFYEALFNYCDELVKE 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA------- 247
               VI GD+N   N +   +            I+ +       +               
Sbjct: 140 GKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIK 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY  +  N    +        +Y            SDHCPI
Sbjct: 200 YSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVY-----------GSDHCPI 248

Query: 299 SIDY 302
            ++ 
Sbjct: 249 MLEL 252


>gi|256763359|ref|ZP_05503939.1| exonuclease III [Enterococcus faecalis T3]
 gi|256684610|gb|EEU24305.1| exonuclease III [Enterococcus faecalis T3]
          Length = 257

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 78/306 (25%), Gaps = 78/306 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ +SWN+N L      +                      LDAD   LQE     A   
Sbjct: 6   TMKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQI 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  +++      +S          A++VR                         
Sbjct: 50  DLELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------ESHDQEG 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     ++ +   + +++  +  +               +         + ++ +  +  
Sbjct: 96  R-----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK 143

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N                   +       +  +  +     F          
Sbjct: 144 -PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGI 202

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYFV+ ++  + L+       +             SDHCP+
Sbjct: 203 YSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPV 251

Query: 299 SIDYDF 304
            +  DF
Sbjct: 252 EVVLDF 257


>gi|223984111|ref|ZP_03634263.1| hypothetical protein HOLDEFILI_01555 [Holdemania filiformis DSM
           12042]
 gi|223963905|gb|EEF68265.1| hypothetical protein HOLDEFILI_01555 [Holdemania filiformis DSM
           12042]
          Length = 276

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 83/289 (28%), Gaps = 41/289 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+           +     R  +    +R    +   DI+ +QE+         
Sbjct: 11  LKVMTFNLKN------DMFFTRKNLRWDTRRQYVRNLIASTSPDIIGVQELSDSMREQLQ 64

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY------PLLGAKDSF 137
                +            ++R      H+ I   K    +L++        P      ++
Sbjct: 65  ALLPQYQFVGQA-----RNRRRQFMHEHSDILFLKDRFELLEEKTFWLSKQPEEAGSRTW 119

Query: 138 SRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +    R      ++    +    V + HL        L  T +     + ++ Q L+   
Sbjct: 120 TSIFPRICTMAQLKDRETEQVFRVFNTHL-----DHLLAYTRTVEIRTIIREMQRLQQ-- 172

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFW--KTIDPNDSLIRFPKEKDSRCNANKNLRN 253
               E   P ++ GD N  ++             ++                   +   +
Sbjct: 173 ----EKACPLILMGDLNTTMSSPSLQLLIKPENRLNLKPVYDSSAAFNTLHYGKGRLKED 228

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++PIDY  + ++         +             G   SDH P+    
Sbjct: 229 RLPIDYIYVSED---------YDVRSTRIITTCFNGLYPSDHYPVICHL 268


>gi|293608668|ref|ZP_06690971.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829241|gb|EFF87603.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 812

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 92/323 (28%), Gaps = 46/323 (14%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K +DAD+  L E+ + 
Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGLMEIANN 520

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +      S  + +      R   + I  AI    K V+ L +   L    D
Sbjct: 521 GYGPNSAIAHLTSALGSDWKYVVPENLDRLGGDAIAVAIIYNSKRVKPLNKPVVL----D 576

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCS-----LLSQQ 187
              +     A         K   V+  HLKS        S  +               + 
Sbjct: 577 LGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDASSIDADQKDGQGCWNPTRVKA 636

Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              +  W+ +          ++ GD N            ++  +    L      + +  
Sbjct: 637 VDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEEPI--LSFEKANYKVLLNDAKVGQGAEA 694

Query: 246 NANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------- 289
            +                 +D+ + D   Y  +++     I  +E  +            
Sbjct: 695 YSYVFGVASDANGNGGAGNLDHAIADAALYPKVVRTFAWHINADEPTVLDYNEEYKTDEQ 754

Query: 290 ---------KRLSDHCPISIDYD 303
                     R SDH P+ +D D
Sbjct: 755 KALFYAEDAYRSSDHDPVIVDLD 777


>gi|158425166|ref|YP_001526458.1| endonuclease [Azorhizobium caulinodans ORS 571]
 gi|158332055|dbj|BAF89540.1| endonuclease [Azorhizobium caulinodans ORS 571]
          Length = 370

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 71/264 (26%), Gaps = 17/264 (6%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           T        +   ++ AD++ L E+ S   ++    +    +       +     +    
Sbjct: 111 TEEAMRNTARVIGDVKADVMALVEVESRPVLSAFNTQILPAVNAIPFDHVMVIDGNDERG 170

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           I   IA R        +S+      +         A   +   +G+ + +L  H KS  F
Sbjct: 171 IDVGIATRADYPIGDMRSHVDDRLPNGQPIFSRDCAEYEIHTPSGQNLLLLLNHFKSKGF 230

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTI 228
                 + + S +    QA  + +   Q+         + GDFN                
Sbjct: 231 G-----SKATSDARRKAQAARVAEIYKQRIADGYSHIAVLGDFNDTPGSAAL-APLLSGT 284

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-------- 280
           D  D       +                IDY ++    +  +                  
Sbjct: 285 DLKDVFGHASFDNGGYPGTYGLCNADNKIDYILLSPELFGKVTAGGVFRKGAWPGSRPKR 344

Query: 281 --NEDDIKSRGKRLSDHCPISIDY 302
                ++       SDH  + +D 
Sbjct: 345 WDVYPEVARPADAASDHSAVWVDL 368


>gi|94267118|ref|ZP_01290753.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
 gi|94269243|ref|ZP_01291411.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
 gi|94272682|ref|ZP_01292167.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
 gi|93450049|gb|EAT01420.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
 gi|93451292|gb|EAT02176.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
 gi|93452167|gb|EAT02834.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
          Length = 248

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 72/283 (25%), Gaps = 42/283 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+NI+     + +                + +   +   D+V LQE+      ++ 
Sbjct: 3   LRIMSYNIHRAIGVDRLFRP-----------ERIARIINHHQPDLVLLQEVDVGVPRSRK 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                                 +    H   A   +     Q++  L            R
Sbjct: 52  LDLAEELARLCDYPHRALGLNVALRQGHYGNATLSRFPIQRQRNIDLT-----LPDHKAR 106

Query: 144 RAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +   + I+      + +   +L                  + S +   L        +
Sbjct: 107 GCLYTNIVIDPDQSGPVALPVFNLHLGLSFHERP--QQVGMVIRSPEFAEL--------D 156

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++AGDFN     L      +  I              +      +      +D  
Sbjct: 157 PAAPCIVAGDFNDWFTRLAP---MFTEIMGFRCATSHSHGFQNSFLTYPSFSPTGGLDKI 213

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              EI+          K  SDH P+  + +
Sbjct: 214 FLRGPL----------EIIKRRRCRMGISKLASDHLPVLAELE 246


>gi|282892485|ref|ZP_06300819.1| hypothetical protein pah_c260o038 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497767|gb|EFB40131.1| hypothetical protein pah_c260o038 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 346

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 90/300 (30%), Gaps = 36/300 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +K+R+VS+N+        +    + V R  +  + + +  + ++ D++  QE+       
Sbjct: 61  EKIRVVSYNMLF----NYMDNRLDEVHRWPNRCSRVVELIQAINPDLIGSQELQQDQVED 116

Query: 82  KV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F  + +  +             +      +         +   S P    KD +S A
Sbjct: 117 LLSFLGDEYAFYGKGTLDGKMKGEVNGIFYRKSRFNVDNESVLFMSSTPHTPGKDPYSFA 176

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +EL   + GK+  + + H+                        +++   I++  +
Sbjct: 177 RTLTILELEDFVTGKRFAIANAHVAFGSIDS------------RDYSVRFMASHISKMAK 224

Query: 201 SLVPFVIAGDFNRKINYLGNN-------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
             +P +I  D N   +            D   + +     L                  N
Sbjct: 225 R-LPVIITADLNTFPHRQDIKKFPAYDGDYLHRLLTSAGLLNAQNTSLLGFLGPLSTYTN 283

Query: 254 ------KIPIDYFVMDQN-----AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 K   D   +             +    + +L+  +  K   +  SDH P+ +D 
Sbjct: 284 DDGETKKGGFDNRFLSTGTPGVFLDHVYVGGGITVLLHAIEPAKVDQQFPSDHLPVIVDL 343


>gi|251794788|ref|YP_003009519.1| exodeoxyribonuclease III Xth [Paenibacillus sp. JDR-2]
 gi|247542414|gb|ACS99432.1| exodeoxyribonuclease III Xth [Paenibacillus sp. JDR-2]
          Length = 258

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 79/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N L                         Y   +DAD   LQE        K+
Sbjct: 1   MKFVSWNVNGLRASVNKGF---------------LDYFNEMDADFFCLQETKLQEGQIKL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                + +F+            +    ++  A+  K+  +          +D+  R    
Sbjct: 46  ELGEAYHLFW----------HYAEKKGYSGTAIFTKHKPLSISYGLGEEDEDTEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     S  +       +       L        +   
Sbjct: 92  -----VITLEYENFYLVTVYTPNARRDLSRLDFRLAWEEMFRGYLIKL--------DEHK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +     +  F      R +A 
Sbjct: 139 PVIVCGDLNVAHQDIDLKNAKSNRGNSGFTDEEREKMTRLLDAGFIDSFRYLYPDRTDAY 198

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        +++                    SDHCP+ 
Sbjct: 199 TWWSFMPKIRERNVGWRIDYFLASARLAPAIVEAGI-----------DSQILGSDHCPVV 247

Query: 300 IDYD 303
           +  D
Sbjct: 248 LTLD 251


>gi|328886193|emb|CCA59432.1| Exodeoxyribonuclease III [Streptomyces venezuelae ATCC 10712]
          Length = 271

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 79/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE          
Sbjct: 11  MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCTAE---- 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +    +       +A+  +       +  L G  +       R
Sbjct: 51  ------QFPTEELRALGYESVVNATGRWNGVALVSRVGLADVVTG-LPGGPEYDGMDEPR 103

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +      Y        +  + LK  + +      
Sbjct: 104 A-----ISATCGPVRVWSVYVPNGREVAHEHYAYK------LRWLEALKAAVAEDAAGDR 152

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N                              +         P+      +  
Sbjct: 153 PFAVLGDYNIAPTDDDVWDRAAFEGLTHVTEPERAALAGLREAGLSDVVPRPLKYD-HPF 211

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    ++   + +            D  + +GK  SDH P+ 
Sbjct: 212 TYWDYRQLCFPKNRGMRIDLVYGNKPFAEAVTDSYV-------DREERKGKGASDHAPVV 264

Query: 300 IDYD 303
           +D D
Sbjct: 265 VDLD 268


>gi|171913163|ref|ZP_02928633.1| hypothetical protein VspiD_18325 [Verrucomicrobium spinosum DSM
           4136]
          Length = 261

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 65/214 (30%), Gaps = 18/214 (8%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M R   L L+   +      ++ VRLV+WN+              +       +  +   
Sbjct: 1   MWRLIFLGLL-VAISTPGYASEVVRLVTWNLKWFP----GERPNATQDEKDRHFLEVAAV 55

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                AD++ LQE+   ++  K+         +   R  +             IA+  + 
Sbjct: 56  MPQFRADVLVLQEVRDQDSAEKLAKLMPGFQVHVVSRFKDEVGGAVGLQQ---IAIMSRF 112

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                       +         R      + + G+ + V  +HLKS         +    
Sbjct: 113 ----AADGAWAESWKRGWANAPRGYAYAKLIVEGRPLHVYGLHLKSNLGDPIKNTSKRED 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
                   + L   I  + ++  P V+ GDFN  
Sbjct: 169 A------VEQLLGHIKDQCKAGEPIVVVGDFNTS 196


>gi|163796419|ref|ZP_02190379.1| Exonuclease III [alpha proteobacterium BAL199]
 gi|159178269|gb|EDP62813.1| Exonuclease III [alpha proteobacterium BAL199]
          Length = 264

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+V+WNIN                          +    +  D++ LQE     A+A  
Sbjct: 1   MRVVTWNIN----------------SVRLRLPRALELIAAVQPDVLCLQE---TKAMADQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +       +        S    +  +AV  +               D        
Sbjct: 42  FPAAAFAEAGYPHQ------AVSGMKGYNGVAVVSRLPIEETDRCDFCAKAD-------- 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  + V + G    + + ++ +    D  +   +P  +         + W T ++    
Sbjct: 88  -ARHVAVRVAGGP-ELHNFYVPAG--GDVPDPAVNPKFAHKLDFLAESRAWFTAERTREQ 143

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                   +     +           +    +      + 
Sbjct: 144 PMILVGDLNIAPLQTDVWSHKQLLGVVSHTPVEVEALGALQADLGWVDAVRQRIPPEQSL 203

Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +       +   S               ++ SDH P
Sbjct: 204 YTWWSYRARDWDESNRGRRLDHVWVTPPLAGTVRAASV-------LREARGWEKASDHVP 256

Query: 298 ISIDYD 303
           + +D D
Sbjct: 257 VIVDLD 262


>gi|157960646|ref|YP_001500680.1| endonuclease/exonuclease/phosphatase [Shewanella pealeana ATCC
           700345]
 gi|157845646|gb|ABV86145.1| Endonuclease/exonuclease/phosphatase [Shewanella pealeana ATCC
           700345]
          Length = 379

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/376 (11%), Positives = 101/376 (26%), Gaps = 88/376 (23%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVF 70
           +  T++   +V+L S+N+    E            S ++     + L ++      DI+ 
Sbjct: 1   MANTSTKTNRVKLASFNLFNYIEPPLAYYDFENIYSAEQWQKKQSWLAEFLAQHQPDIIG 60

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQS 127
            QE+ S +A+ +      +   ++T             D    +  +     V     ++
Sbjct: 61  FQEVFSASALDEQMHAAGYE-HFATVGEPTVIDDYICRDPVVGLGSKFPFTEVTAIEAEA 119

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             +     + + A +R+ +   V++    +  + +           E   +        Q
Sbjct: 120 EYIHALGLNPNFAFSRKPLRATVQLPLIGLCDIYVVHFKSKRPHLDELPAAKFVQSKVTQ 179

Query: 188 AQ----------------------------------WLKDWITQKKESLVPFVIAGDFNR 213
           A                                        + ++ E+  P ++ GDFN 
Sbjct: 180 ATNASSAALVNFGELLGRNSLGQWASSIQRGSEAALLFHAMLQRRIETNQPMILMGDFNE 239

Query: 214 KINYL--------------------------GNNDDFWKTIDP---------------ND 232
           ++                                  F + +                  +
Sbjct: 240 ELTSSVLSPLTNRELRFEKEGLGQLANFPLTDAYKLFQQGLQDLFGVKATDSSLDEIAAE 299

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------K 286
                 K + SR   +    +   +DY ++  +              Y+ +D        
Sbjct: 300 EERMLAKARASRAPTHYYGASGNVLDYILLSADFDPSFDNSVAEVCDYHTEDRHLVNPSF 359

Query: 287 SRGKRLSDHCPISIDY 302
            R  + SDH P++   
Sbjct: 360 ERDSQSSDHAPVTCTL 375


>gi|146297973|ref|YP_001192564.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
           UW101]
 gi|146152391|gb|ABQ03245.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
           UW101]
          Length = 305

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 76/296 (25%), Gaps = 63/296 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              ++S+N+   +  + +                ++ +    D DI+ +QE  +   +  
Sbjct: 54  DFSVMSYNVRLFNVFKWLDRDDIP--------ENIKGFIDEKDPDILCIQEYSNSAHLDL 105

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               + +                    I T  A+  K   + +       + ++      
Sbjct: 106 KVYPHRYIFI-------------DGKQIKTGQAIFSKFPIIDEGKIVFPKSDNN------ 146

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDS---------------LENTYSPSCSLLSQQ 187
              V   ++     I V ++HL+S                      +  Y+      +QQ
Sbjct: 147 --VVYADIKRGKDIIRVYNMHLQSIKISPDVSEISDDIDNVNQKKSQRIYARISKGFTQQ 204

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            +  + +    K+   P +I GD N         +   K          F +  +     
Sbjct: 205 QEQAEIFKEHIKKCKYPIIICGDMNNSPFSYVYRNIKGKL------KDAFEEAGEGFGAT 258

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            K       IDY   D                             SDH PI     
Sbjct: 259 YKFKYYPARIDYIFTDTKMKVK-------------QFESFPDFENSDHYPIMTRLS 301


>gi|329930518|ref|ZP_08284058.1| exodeoxyribonuclease III [Paenibacillus sp. HGF5]
 gi|328934896|gb|EGG31386.1| exodeoxyribonuclease III [Paenibacillus sp. HGF5]
          Length = 250

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 75/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L                         Y    DADI  +QE        ++
Sbjct: 1   MKLVSWNVNGLRACVTKGFM---------------DYFNEADADIFCVQETKLQAGQIEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S       I                   +    +  S    R
Sbjct: 46  DLGPEYQQYWNYAEKKGYSGTAVFTRIA---------------PLSVRYGLEEDSEPEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  ++++++  +     S  +               L        +   
Sbjct: 91  -----VITLEFEDFYLVNVYTPNAKRDLSRLDYRLEWEERFRTYLLQL--------DERK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                        +     +  F      R +  
Sbjct: 138 PVIVCGDLNVAHQEIDLKNAKSNHGNSGFTLEERGKMTDLLAAGFIDSFRHFYPDRTDVY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+      + L        +             SDHCP+S
Sbjct: 198 SWWSYMAKVRERNIGWRIDYFLTSARLAEKLKDAEIDCHVL-----------GSDHCPVS 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 LTLE 250


>gi|320529778|ref|ZP_08030856.1| exodeoxyribonuclease III [Selenomonas artemidis F0399]
 gi|320138017|gb|EFW29921.1| exodeoxyribonuclease III [Selenomonas artemidis F0399]
          Length = 250

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VSWN+N L         ++                K LDAD   LQE         +
Sbjct: 1   MRFVSWNVNGLRAALKKGFMES---------------FKELDADAFCLQETKMQEG-QAI 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++ +     +          +  A+  +   +       +   D+  R    
Sbjct: 45  LDLPGYEQYFYSAEKKGY----------SGTAIFTRVKPLSVARGIGIPQHDNEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +    ++++ ++  +     +  +               L+        S  
Sbjct: 91  -----VITMEFDDLYLVTVYTPNSQNALARLDYRMAWEDAFRSFLLELR--------SKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +     +  F      +  A 
Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFGELLAAGFVDTFRALYPDKVGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     +        ++            SDHCP+S
Sbjct: 198 TWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEIHADVF-----------GSDHCPVS 246

Query: 300 IDYD 303
           +   
Sbjct: 247 LTLS 250


>gi|229917919|ref|YP_002886565.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
 gi|229469348|gb|ACQ71120.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
          Length = 247

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 85/285 (29%), Gaps = 45/285 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI                         + Q  K ++AD++ LQE+ SY      
Sbjct: 1   MRIATYNIWN------------HDTLWQKRIDAICQEVKRINADVIALQEVRSYE----- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +                    +     +A   K      ++      ++S       
Sbjct: 44  -KGSVAHDIAEATGYPYCVFHAYPDSPDEGLAFLSKVPFSSVEAIWEEDVEESNFC---- 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  + +   G++  + ++HL               S S+   Q + ++DW+++  +  +
Sbjct: 99  -ATRVTLIFGGQEWGLTNVHLNW------------RSSSIRECQMEVVRDWLSKGHQKAI 145

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----KIPID 258
              + GDFN        +D          + +            N  L++         D
Sbjct: 146 EV-LCGDFNDHPQSTIYDDVSDAGWLDVTTFVGEEARPTLDVKHNPYLQSSHLEQPERYD 204

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +      +         +    D   SR    SDH  + +D+ 
Sbjct: 205 WILFRSEWSEL----EVQHVDVFGDMRTSRDVVPSDHYGVVVDFT 245


>gi|253574957|ref|ZP_04852296.1| exodeoxyribonuclease III [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251845413|gb|EES73422.1| exodeoxyribonuclease III [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 251

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 80/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L    G                    Y K  DADI  LQE        ++
Sbjct: 1   MKLVSWNVNGLRACVGKGF---------------LDYFKEADADIFCLQETKLQEGQIEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++      +S       I               +   +    +       R
Sbjct: 46  DLGSEYEQYWNYAEKKGYSGTAVFTRI---------------KPLSVRYGMEEDYEPEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  ++ +++ ++  +     S  +               L        +++ 
Sbjct: 91  I-----ITLEFEQFYLVTVYTPNAKRDLSRLDYRMEWEDRFRTYLTGL--------DAVK 137

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N               Y          +  +  +  F      R    
Sbjct: 138 PVIVCGDLNVAHNPIDIKNAKSNEGNSGYTLEERGKMTELLASGFIDTFRHFYPDREGVY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L        +             SDHCP+S
Sbjct: 198 SWWSYMPKIRERNIGWRIDYFLASSRLAPKLQDAGIDCHIL-----------GSDHCPVS 246

Query: 300 IDYDF 304
           +  ++
Sbjct: 247 LTVEW 251


>gi|300113189|ref|YP_003759764.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
 gi|299539126|gb|ADJ27443.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
          Length = 289

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 86/303 (28%), Gaps = 59/303 (19%)

Query: 11  FFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQY 60
             L   + S AQ+   +RL+S+NI           +            R       + Q 
Sbjct: 4   LALCSPSTSSAQEQHSLRLLSYNIQAGVTTTRYHHYLTRSWKHILPDGRRHQTLASIAQV 63

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKK 119
               D DIV LQE  S +       +            ++        +I   + A+  +
Sbjct: 64  IS--DFDIVGLQEADSGSLRTGFVNQAKLLAELCDFTYLHQQATRRFANIAQQSNALLSR 121

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                 ++Y L G          R A+          + VL IHL               
Sbjct: 122 IQPSYLRTYRLPGL------VPGRGAILAHFGNPKNPLIVLMIHLALG------------ 163

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                +QQ     D+I+    +    V+ GD N +I+         KT            
Sbjct: 164 -RRSRTQQL----DFISNLVHNHPYVVVMGDLNCQIHSPELRALLRKTGLKAPVTKIPT- 217

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                     + R K  ID+ ++  +     +                    +SDH P++
Sbjct: 218 --------YPSWRPKRHIDHILVSPSLEVIQVCALAH--------------AVSDHLPLA 255

Query: 300 IDY 302
            + 
Sbjct: 256 TEI 258


>gi|228469355|ref|ZP_04054373.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas
           uenonis 60-3]
 gi|228309152|gb|EEK17772.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas
           uenonis 60-3]
          Length = 350

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/332 (11%), Positives = 87/332 (26%), Gaps = 59/332 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLD--- 65
             Q+   VS+N+  L +    + W +              R       L +   ++    
Sbjct: 27  AQQRFTFVSYNVENLFDTIPSTRWDDREYLPTARKGWTAPRMKRKCRQLAEVISHVTAWD 86

Query: 66  -ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
              ++ LQE+ S  A+ ++       +  S       +        H A+        + 
Sbjct: 87  IPALIALQEVESVEALEQL---GQHTLLSSANYKTICATGSDRRGSHVALLYDADRFALE 143

Query: 125 Q-QSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           + + +PL    DS      R  + +   +    ++ ++  HL S     + E   +    
Sbjct: 144 RIEEWPLRITPDSVY--PTRNLLFVSGRLPSAARLSLIVCHLPSRRGGATAEKARATLIK 201

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIR 236
           +L  +   L        +     ++ GDFN        +        +   +D  + +  
Sbjct: 202 MLRMRTDSLL-----MADPAQSIIVLGDFNATPEDALTDSWALSYQAYQSQVDSLEMVDL 256

Query: 237 FPKEKDS-----RCNANKNLRNKIPIDYFVMDQNAYKFLIQESF---------------- 275
            P             +     +   ID   + ++                          
Sbjct: 257 TPPFTSEQLETMPPGSYYYRGSWERIDRLFVSRSLLAESHYPHIELETVRIALPPQQYMH 316

Query: 276 -----SEILYNEDDIKSRGKRLSDHCPISIDY 302
                           +     SDH P+    
Sbjct: 317 ETPAPWGRPRRTYGGDTYLGGPSDHLPLVGTL 348


>gi|184157496|ref|YP_001845835.1| extracellular nuclease [Acinetobacter baumannii ACICU]
 gi|332872463|ref|ZP_08440434.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6014059]
 gi|183209090|gb|ACC56488.1| predicted extracellular nuclease [Acinetobacter baumannii ACICU]
 gi|322507811|gb|ADX03265.1| Putative extracellular nuclease [Acinetobacter baumannii 1656-2]
 gi|323517411|gb|ADX91792.1| extracellular nuclease [Acinetobacter baumannii TCDC-AB0715]
 gi|332739349|gb|EGJ70205.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6014059]
          Length = 812

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 98/325 (30%), Gaps = 50/325 (15%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K++DAD+  L E+ + 
Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEIANN 520

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +         + +      R  N+ I  AI    K V+ L ++  L     
Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKSLNKAVVLDLGD- 579

Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLLS 185
                 NR  +    +     K   V+  HLKS        N+ +               
Sbjct: 580 -----KNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCSGVDANSSNADQNDGQGCWNPTRV 634

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  W+ +          ++ GD N            ++  +    L      + +
Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 692

Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
           +  +                 +D+ + D + Y  +++     I  +E  +          
Sbjct: 693 QAYSYVFGVASDANGNGGAGNLDHAIADADLYPKVVRTFAWHINADEPTVLDYNEEYKTD 752

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +D D
Sbjct: 753 EQKALFYSEDAYRSSDHDPVIVDLD 777


>gi|255727859|ref|XP_002548855.1| hypothetical protein CTRG_03152 [Candida tropicalis MYA-3404]
 gi|240133171|gb|EER32727.1| hypothetical protein CTRG_03152 [Candida tropicalis MYA-3404]
          Length = 815

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 79/332 (23%), Gaps = 43/332 (12%)

Query: 13  LVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            V  T S      ++S+N      +  +      +           L         DI+ 
Sbjct: 460 SVATTTSSGDSFTVLSYNTLCQHYATPKMYKFTPSWALDWEYRKNSLENEILGYSTDIIC 519

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----IHTAIAVRKKNVRVLQ 125
           LQE+ +        P  T   +         SK   +++        A   R +   +  
Sbjct: 520 LQEVETRTFNEFWLPLMTSKGYRGHFYSKTRSKTMQDSESKKKVDGCATFYRGEKFSLSN 579

Query: 126 QSYPLLGAKDSFS-------RAGNRR--------AVELLVEINGKKIWVLDIHLKSFCFL 170
           +      +    +        A NR          + L  +  G+ I V++ HL      
Sbjct: 580 KQNFEYASAWLGNDRYKKTEDAFNRYVNKDNIALILFLQHKETGQDIAVVNTHLHWDPAF 639

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDF 224
           + ++        L   Q    +   +         ++ GD N   +              
Sbjct: 640 NDVKT-LQVGILLEELQVTLKRQGQSGDDIKNASIIVCGDLNSVKDSAVYQLFSTGVSKD 698

Query: 225 WKTIDPNDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD-QNAYKFL 270
            + +   D      +                     N        IDY            
Sbjct: 699 HEDLSDRDFGKFTEEGFHHPFKLKSAYETVGELPFTNMTPGFTDNIDYIWYSTPTLQVKG 758

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +     E   +           SDH PI   +
Sbjct: 759 LLGKVDEEYTSHCIGFPDANFPSDHVPILARF 790


>gi|254561142|ref|YP_003068237.1| exodeoxyribonuclease III [Methylobacterium extorquens DM4]
 gi|254268420|emb|CAX24377.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens DM4]
          Length = 264

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 79/303 (26%), Gaps = 64/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  +      D+V LQE+   +A    
Sbjct: 1   MRITTWNVN----------------SIKQRVGHLLGFLDEAKPDVVCLQELKCQDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++        +  +A+  +    LQ +  L G          R
Sbjct: 41  ------SFPREEIEAAGYAVETLGQKAYNGVALLVRAP--LQYTQLLRGLPGDAEDEQAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L+       + V  I+L +       + +Y  +          L+        +  
Sbjct: 93  YIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMAR------LRTHARALMTTEE 146

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANK 249
             V+AGDFN      +           +   ++   F                       
Sbjct: 147 ALVLAGDFNVIPEPEDAADPTAWTQDALFLPETRRAFRALVAEGFTDGLRACEPSAGLYT 206

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L+  S               ++ SDH P+++
Sbjct: 207 FWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSASVQRH-------LRGLEKPSDHVPVTV 259

Query: 301 DYD 303
           +  
Sbjct: 260 ELS 262


>gi|304320394|ref|YP_003854037.1| exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503]
 gi|303299296|gb|ADM08895.1| exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503]
          Length = 264

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 80/307 (26%), Gaps = 71/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ +WNIN                       L+ ++ + +  DI+ LQE    +    A
Sbjct: 1   MRITTWNIN----------------SVRLRLGLVERFLETVKPDILCLQETKCQNDQFPA 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K F    +             +       +  +A   +            G  D+     
Sbjct: 45  KAFANAGY-----------PHQAIHGQRGYHGVATLSRLPLHEITRRQYCGKDDARH--- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               + + +E     I + + ++ +   +   E        L       +++  T     
Sbjct: 91  ----IAVTLEEG---IVIHNFYVPAGGDIPDPEQNEKFDHKLRF--VDEMREVFTGL--G 139

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             P ++ GD N   +                     +     ++    +    +      
Sbjct: 140 DQPHILVGDLNIAPHENDVWSHKQLLKVVSHTPPETERLAALMEAAPFIDVMRELTADEQ 199

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+  +        + +      +   D      R SDH
Sbjct: 200 KLYTWWSYRSKDWRKSNRGRRLDHIWVSPALKDRALAKGRR--AFTVHDDVRGWDRPSDH 257

Query: 296 CPISIDY 302
            P+++D 
Sbjct: 258 APVTLDL 264


>gi|91974922|ref|YP_567581.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5]
 gi|91681378|gb|ABE37680.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5]
          Length = 352

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/314 (9%), Positives = 70/314 (22%), Gaps = 65/314 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +  +  +  L +WNIN                       L+  + K    D++ LQE  
Sbjct: 77  NSPRLPMRFTLTTWNIN----------------SVRLRIDLVAAFLKEQQPDVLCLQETK 120

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                   FP   +                +    +  +AV  K   V +         D
Sbjct: 121 CP---DDAFPLKRFKQL------GYEHIALNGQKGYHGVAVISKIPFVARDIRIFCDNLD 171

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S         + + +        ++  +       D  +   +P           +K   
Sbjct: 172 SRH-------ISVSLGTGDNDPPLVLHNFYVPAGGDVADPELNPKFKHKLSFLDEMKACE 224

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPK 239
                     ++ GD N   +                           +   + +     
Sbjct: 225 PLHPSGDARHILVGDLNVAPHEHDVWSHKQLLKVVSHTPVECEKLLAVLRAGNWVDVARD 284

Query: 240 EKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         +            +D+  + +               +         
Sbjct: 285 RIPLSEKIYTWWSYRAADWTVGDRGRRLDHIWVSEALRTR-------VTDFKILRDARSW 337

Query: 290 KRLSDHCPISIDYD 303
           +R SDH P+++  +
Sbjct: 338 ERPSDHVPVTVTME 351


>gi|326386341|ref|ZP_08207964.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209002|gb|EGD59796.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 267

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 85/310 (27%), Gaps = 72/310 (23%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +   A  +++ S+NIN                   +    L ++ +    DI  LQE+ +
Sbjct: 2   SEKRASSIKVASFNING----------------IKARLPRLIEWLEETQPDIACLQEIKT 45

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKD 135
            +               +    I +            +A+  +    V  Q       +D
Sbjct: 46  QDE----------GFPAADFAAIGYEAIWHGQKGFNGVAILARGERPVEVQRGLAGEPED 95

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             SR          +E +   + V+ I+L +       +  Y        +  + LK  +
Sbjct: 96  EHSRY---------LEADVMGLRVVCIYLPNGNPQPGPKFDYK------LRWMERLKTRM 140

Query: 196 TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPK 239
            Q     VP ++ GD+N                       +   + + +    +      
Sbjct: 141 AQIAAEEVPALVIGDYNVIPRDNDIWSTRAMADDALMQPESRAAYRRLLHAGWTDALGLL 200

Query: 240 EKDSRCNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                     + +           ID+ ++       L+           D      ++ 
Sbjct: 201 NPRGGVYTFWDYQAGAWQRDHGFRIDHALLSPELADRLVAAGV-------DKTYRGREKA 253

Query: 293 SDHCPISIDY 302
           SDH P+ +  
Sbjct: 254 SDHAPVWVSI 263


>gi|331018945|gb|EGH99001.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 380

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 101/342 (29%), Gaps = 75/342 (21%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C+ +V        Q +++++WNI  L+                  + + +    +
Sbjct: 52  LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   +A ++P +T   ++  E + 
Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157
           +     S          R       +   P+  A     +   + A+ +      +G K+
Sbjct: 172 SPHIWGS-VGRKLTTLSRFHIDSAERLQLPMPDANIISRQFQPKNALLVSYLPLRDGGKL 230

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-- 215
            V++ HL +    D              +Q    +  +++ +    P++I GDFN     
Sbjct: 231 AVINTHLATAKPGDG----------TAQKQIASTETLLSKLEGGGTPWLIGGDFNLLPLG 280

Query: 216 ----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPI------- 257
                     +    + +     +    +    +   +  +    +  N   I       
Sbjct: 281 QYQRLPEQQRHGYAADSELHALWEKYPMIPNNTESSGTDRSQWLTHFPNDNRINGPDRTV 340

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           DY     +  +     S           +     +SDH P+ 
Sbjct: 341 DYLFYSPSLKR----VSARV-------RRDDTLLISDHLPVI 371


>gi|330466791|ref|YP_004404534.1| exodeoxyribonuclease III Xth [Verrucosispora maris AB-18-032]
 gi|328809762|gb|AEB43934.1| exodeoxyribonuclease III Xth [Verrucosispora maris AB-18-032]
          Length = 265

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 73/301 (24%), Gaps = 69/301 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    L  +    + D+V LQE    +     
Sbjct: 1   MRLATWNVN----------------SVKARLPRLLDWLAGTEPDVVCLQETKCPDGA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + ++    ++     +A+  +              +  F     R
Sbjct: 42  -------FPVAEVGDLGYTVASHSDGRWNGVAILSRIGLSDVTVG--FPGEPGFPEPEAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                        + V  +++ +    D     Y  +          L+D +  +     
Sbjct: 93  AIAATC-----DGVRVWSVYVPNGRTPDDPHYAYKLA------WLAALRDALDAELTDGR 141

Query: 204 PFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANK 249
              + GDFN         D                      +  L+          +   
Sbjct: 142 ALAVCGDFNVAPTDDDVWDPALFATSTHVTPAERAALAALRDLGLVDVVPTPMKGPHPFT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +         + ID         +       +      D    +G+  SDH PI +
Sbjct: 202 YWDYRAGMFHQNKGMRIDLVYASAPFAR-------TVSSAYVDREARKGRSPSDHAPIVV 254

Query: 301 D 301
           D
Sbjct: 255 D 255


>gi|312885637|ref|ZP_07745272.1| exodeoxyribonuclease III [Mucilaginibacter paludis DSM 18603]
 gi|311301844|gb|EFQ78878.1| exodeoxyribonuclease III [Mucilaginibacter paludis DSM 18603]
          Length = 257

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 83/302 (27%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++      D+V LQE          
Sbjct: 1   MKIATYNVNGVNG----------------RLPVLLRWLNQTTPDVVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  +N+++ +    L G  +      +R
Sbjct: 35  LKAPQEKFPEQAIADAGYQAIWHGQKSWNGVAILTRNLQIKEIGRALPGDPEDMH---SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++       I +  ++L +       +  Y        Q  + LK        +  
Sbjct: 92  YIEAVV-----NGIHIGCLYLPNGNPAPGPKFDYK------LQWFERLKSHAASLLAAGT 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD+N     L                     +K +          K   S+    
Sbjct: 141 PVVLTGDYNVMPTELDVYKPERWLDDALFRPETRAAFKDLVDQGWTDAIRKLYPSQKIYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          ID+F++       L+           D      ++ SDH P+ I
Sbjct: 201 FWDYFRDAYGRDAGLRIDHFLLSPQLDGRLLAAGV-------DRNVRGWEKTSDHAPVWI 253

Query: 301 DY 302
           + 
Sbjct: 254 EL 255


>gi|282901543|ref|ZP_06309465.1| Exodeoxyribonuclease III xth [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193586|gb|EFA68561.1| Exodeoxyribonuclease III xth [Cylindrospermopsis raciborskii
           CS-505]
          Length = 260

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 83/301 (27%), Gaps = 65/301 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  +    + D++ LQE        KV
Sbjct: 1   MKIATWNVN----------------SIRTRLGQVISWLGENNVDVLCLQE-------TKV 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +       +       +   A+  R+    V      +L   +       R
Sbjct: 38  IDTDFPLTVFHDMGYHTYIYGQKAYNG-VALISRQPMKSVSTGFCQVLENLEPEWDDQKR 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++      K+ ++++++ +   + S +  Y        Q    LK ++    +S  
Sbjct: 97  VITGIV-----DKVRIINLYVPNGSAVGSEKYQYK------LQWLAVLKTYLEVLLKSNS 145

Query: 204 PFVIAGDFNRKINYLGNNDD-------FWKTIDPNDSLIRFPKEKDSRCN-------ANK 249
             ++ GDFN  +  +                ++                           
Sbjct: 146 DVIMCGDFNIALEDIDIYKQVDTENQIMASLLERKALREILNLGFGDGFRKFNSQGGNYS 205

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+  +    YK              D    + ++ SDH P+ +
Sbjct: 206 WWDYRTGAFKRNSGWRIDHHYLTDVLYKQAKSCLI-------DISPRKLEQPSDHAPVVV 258

Query: 301 D 301
           +
Sbjct: 259 E 259


>gi|220911407|ref|YP_002486716.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6]
 gi|219858285|gb|ACL38627.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6]
          Length = 268

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/306 (9%), Positives = 75/306 (24%), Gaps = 67/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                 +    +  + +  D D++ +QE    +     
Sbjct: 1   MKIATWNVNSL----------------RARADRVEAWLQRSDCDVLAIQETKCKDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + +       +    +A+  +      +   L       +     
Sbjct: 41  ------NFPWELFERMGYEVAHFGVNQWNGVAIASRVGLEDVERTFLDQPAFGKAGKDPV 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +    +    G  + +  +++ +     D            L   AQ L       +   
Sbjct: 95  QEARAMAATCGG-VRIWSLYIPNGRSLDDEHMPYKLKWLESLKSHAQSLV-----TENPE 148

Query: 203 VPFVIAGDFNRKI-----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               + GD+N                    +        +   +                
Sbjct: 149 AQVALMGDWNIAPFDDDVWDIDLFVNNGYTHVSPPERAAFHAFETAGFTDVVRPYTPGP- 207

Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                               ID+ +  +     +   S        D  + +GK  SDH 
Sbjct: 208 GVYTYWDYTQLRFPKKEGMRIDFVLASKALASRVTGASI-------DREERKGKGASDHA 260

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 261 PVLVEL 266


>gi|85710025|ref|ZP_01041090.1| exonuclease III [Erythrobacter sp. NAP1]
 gi|85688735|gb|EAQ28739.1| exonuclease III [Erythrobacter sp. NAP1]
          Length = 262

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 80/306 (26%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                       ++ +Y K    D++ LQE+   + +   
Sbjct: 2   LSVATWNIN----------------SARLRLPIIEKYLKAEAPDVLCLQEIKCESHL--- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +   +    +  S    +  +A   +        +      +        
Sbjct: 43  ------FPAEALAEMGYEHQAISGQKGYHGVATVSRVPIREISRHDWQDNGE-------- 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  + VE+ GK + + ++++ +   +               Q+  +L        +   
Sbjct: 89  -ARHVGVEVVGKDMLIENVYVPAGGDIPD-----REKNVKFGQKLDFLGRMTKWADKVDK 142

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P +I GDFN                   +     +   +  D +  +    +        
Sbjct: 143 PTLIVGDFNIAPLESDVWSHKQLLKVVSHTPIEVETLQRFKDAHGWVDIGREHIRDPERY 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+                 E            ++ SDH P
Sbjct: 203 YSWWSYRSPDWRKNDRGRRLDHMWASPELAAQAKAHRLLEE-------ARSWEKPSDHIP 255

Query: 298 ISIDYD 303
           +  ++D
Sbjct: 256 LVTEFD 261


>gi|313895351|ref|ZP_07828908.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312976246|gb|EFR41704.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 250

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VSWN+N L         ++                K LDAD   LQE         +
Sbjct: 1   MRFVSWNVNGLRAALKKGFMES---------------FKELDADAFCLQETKMQEG-QAI 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++ +     +          +  A+  +   +       +   D+  R    
Sbjct: 45  LDLPGYEQYFYSAEKKGY----------SGTAIFTRVKPLSVARGIGIPQHDNEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +    ++++ ++  +     +  +               L+        S  
Sbjct: 91  -----VITMEFDDLYLVTVYTPNSQNALARLDYRMAWEDAFRAFLLELR--------SKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +     +  F      +  A 
Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFGELLAAGFVDTFRALYPDKVGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     +        ++            SDHCP+S
Sbjct: 198 TWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEIHADVF-----------GSDHCPVS 246

Query: 300 IDYD 303
           +   
Sbjct: 247 LTLS 250


>gi|269127062|ref|YP_003300432.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
 gi|268312020|gb|ACY98394.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
          Length = 644

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 86/304 (28%), Gaps = 64/304 (21%)

Query: 5   YVLALVFFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
            VL     L   T   A+        +R++++NI+                    D   L
Sbjct: 393 LVLLAGTLLFTVTNPKAEPRAADPARLRVLTYNIHH-----------GVNAAGKLDLDAL 441

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               +   AD+V LQE+G  +    +    T    + + RL  H       D     A+ 
Sbjct: 442 AAVIERQRADVVLLQEVGRGS----LVSGTTDVGVWLSRRLGMHLIWGPAADGQFGNAIL 497

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                +   S  +         +  R  V   +++ G+ ++V   HL             
Sbjct: 498 TSRRVLSSGSARMPKG----DWSQIRGYVWARLDVGGRPVYVWSTHLDGGA--------- 544

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             + +   + A  L+ W           +I GD N +           + +D        
Sbjct: 545 DRAAARQREIAALLRAW-----GGAPRTIIGGDMNSEPGSAE----MSRFLDGTGLRASA 595

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +      A K       +D+ +   +     +                     SDH P
Sbjct: 596 LGDYAPTTPAGKK------VDWILGTDDL----VFSDHGVHPSKT----------SDHYP 635

Query: 298 ISID 301
           +++ 
Sbjct: 636 VAVT 639


>gi|240138687|ref|YP_002963159.1| hypothetical protein MexAM1_META1p2085 [Methylobacterium extorquens
            AM1]
 gi|240008656|gb|ACS39882.1| hypothetical protein, putative 5'-nucleotidase domain
            [Methylobacterium extorquens AM1]
          Length = 2794

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 87/350 (24%), Gaps = 72/350 (20%)

Query: 19   SVAQKVRLVSWNINTLSEQEG-----------VSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
             V   +++ S N+                        NS +        L        AD
Sbjct: 1279 PVGGTLKVGSLNVLNYFTTLDTGSAARTAIGLEPRGANSPEELARQTEKLVTTLIGTGAD 1338

Query: 68   IVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRD------SNNDIHTAI 114
            ++ L E+ +        NA+  +  +        T   +N   +         + I    
Sbjct: 1339 VLGLTEIENQFRPGDPGNALEHLVGQLNLRAGAGTYASVNPGAQLDQGQFLGGDAIAVGF 1398

Query: 115  AVRKKNVRVLQQSYPLLGAKDSFSRAGN------------------RRAVELLVE--ING 154
              +   V V   +          +                      R A+ +       G
Sbjct: 1399 IYKPSKVSVAMNTTIERLDDTDVAAFNPALLERSTIGHLFNGANTSRAALAVTFNEIATG 1458

Query: 155  KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVI 207
            +    +  H KS     +  +          QQ     A  L  W++ +         ++
Sbjct: 1459 EDFTAIITHFKSKGGTGTGADADQGDGQGAWQQQRELAATALAQWVSMRPTGTQDSDTLL 1518

Query: 208  AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
             GDFN  +     +      I          +++ +   +         +D+ +   +  
Sbjct: 1519 LGDFNAYLKEDALD------ILKAAGFTNLAEDRLANPYSYVFDGAYGALDHALASASLN 1572

Query: 268  KFLIQESFSEILYNEDDIKSRGKRL---------------SDHCPISIDY 302
            + +   +   I  +E D                       SDH P+ +  
Sbjct: 1573 RQVTGVTEWHINADEADAIDYNLDFGRSPSSFDGRSPARESDHDPVLVGL 1622


>gi|118385793|ref|XP_001026022.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89307789|gb|EAS05777.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 354

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 91/320 (28%), Gaps = 49/320 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEMGSYN 78
           + ++ + S+NI      +         +    DY    + +  K +++DIV LQE     
Sbjct: 12  SNQISITSYNILADLYTDPWYFPYCPKQYLNFDYRKWKIVEEIKLINSDIVCLQEADHIE 71

Query: 79  AVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               + F    + I Y+ +                   +  ++V       P    K ++
Sbjct: 72  DFYYQQFQDLGYQIQYALKPYRAEGILVMFKKDK--FKMISEHVINFDNEIPDTFNKANY 129

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R  N   ++L   I+   I + + HL               +  +   Q   +   +T+
Sbjct: 130 QRNNNALIIQLKHLISDLNIVIANTHLFWNP----------QNEEVKLLQTAQILQHLTK 179

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWK------------------------------- 226
             +     ++ GDFN             K                               
Sbjct: 180 NYKQDENIILCGDFNSMPTSNVIKYITDKKEPHLSRVEKQFAKYVLIKDMMAIHNMFSEM 239

Query: 227 -TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFSEILYNED 283
             ID   S   + K        N     K  +DY + + N  +F +         L  + 
Sbjct: 240 NLIDLKSSYDDYLKTGKHPEFTNYTQNFKGTLDYILFNPNMKQFQLSEVREIPIDLIKKQ 299

Query: 284 DIKSRGKRLSDHCPISIDYD 303
                    SDH PI+  + 
Sbjct: 300 KGLPSQDYPSDHLPITAIFS 319


>gi|300777930|ref|ZP_07087788.1| possible exodeoxyribonuclease III [Chryseobacterium gleum ATCC
           35910]
 gi|300503440|gb|EFK34580.1| possible exodeoxyribonuclease III [Chryseobacterium gleum ATCC
           35910]
          Length = 259

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 83/303 (27%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ K    DIV LQE          
Sbjct: 1   MKIATYNVNGVNG----------------RLPVLLKWLKEASPDIVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    +       +A+  KN  + +    L G  D      +R
Sbjct: 35  LKAPQERFPLQEINNAGYQAIWNGQKSWNGVAILAKNKEITEVQRSLPGDPD---DIQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++      ++ +  ++L +       +  Y  S        +  K    Q  +  +
Sbjct: 92  YIEAII-----DQMVICCLYLPNGNPYPGPKFDYKLS------WLKRFKKRTDQLIKMEL 140

Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDSLIR------------FPKEKDSR 244
           P ++ GDFN               ND  ++                      +P EK   
Sbjct: 141 PAILIGDFNIIPEPIDVHKPERWENDALYRVEVRKAYKDLQKKGWLDSIRSLYPGEKIYT 200

Query: 245 CNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +D+ ++       L            D      ++ SDH P+ I
Sbjct: 201 FWDYLYKAYDRNAGIRLDHILLSPYLQSRLQSGGV-------DRQVRGWEKSSDHAPVWI 253

Query: 301 DYD 303
           +  
Sbjct: 254 ELS 256


>gi|167648964|ref|YP_001686627.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31]
 gi|167351394|gb|ABZ74129.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31]
          Length = 268

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 76/305 (24%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                          ++      D++ LQE+         
Sbjct: 3   LRIATWNVN----------------SVRLRAEQAARFVDEQAPDVLCLQEIKCQEG---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +   +     +         +A+  +              +D+ +    R
Sbjct: 43  -----EFPREAFVAMGLPHLKIMGQKGWHGVAIASRLPI-----------EDAPALNACR 86

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V      + + + ++ +    D+ +   +P         + L   + ++ +   
Sbjct: 87  EGHARCVSGKIAGVEIHNFYIPAG--GDTPDRALNPKFDHKLDFYETLTAEMKKR-DPKA 143

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                           F   +   D L             
Sbjct: 144 PLILTGDLNVAPGENDVWSHRQMSKIVSHTPVELEAFAGLVGSIDFLDLPRLATPEPEKL 203

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+ +         I +   ++     D     +R SDH P
Sbjct: 204 FSWWSYRAADFRKSNRGLRLDHILASPGLRDAAIIDG--KVSSKVHDTVREWERPSDHAP 261

Query: 298 ISIDY 302
           ++ D 
Sbjct: 262 VTADL 266


>gi|86134605|ref|ZP_01053187.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
 gi|85821468|gb|EAQ42615.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
          Length = 325

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 79/314 (25%), Gaps = 48/314 (15%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD-------A 66
            +  +N+  L +        +              R       L      L         
Sbjct: 16  TIAFYNVENLFDTVDNPNTADDDYTPSGKKKWTINRYNIKIKKLSSIIAQLGLNKSKYPP 75

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQ 125
            IV L E+ +   V+ +   +     +      +         I  A+   K     +  
Sbjct: 76  AIVGLVEVENAKVVSDLANSSYLKKHHYGFVHYDSPDE---RGIDVALLYNKISFELIAS 132

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           ++YP+    D   R   R  +++   ++G+ + ++  H  S     +       + +   
Sbjct: 133 ETYPVFLEDDEGERDYTRDILKVSGHLHGELVHIIVTHWSSRREGVAETEHKRIAAAEKI 192

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           ++           KE     +I GDFN         +     +  +           +  
Sbjct: 193 REITA----GIHAKEMGPKIIIMGDFNDDPKSKSVKEYL---VKDDFYNPMEKILNPTSK 245

Query: 246 NANKNLRNKIPIDYFVMDQNAYK-------------------FLIQESFSEILYNEDDIK 286
            +     +    D  +  +N                       + +  +    +      
Sbjct: 246 GSLTYNGSWNLFDQIIFSKNFLVEEKDKLYFKHAEVFNKKWMKIYKGKYKGSPFRTYIGP 305

Query: 287 SRGKRLSDHCPISI 300
                 SDH P+  
Sbjct: 306 WYKGGFSDHFPVYA 319


>gi|110635562|ref|YP_675770.1| exodeoxyribonuclease III Xth [Mesorhizobium sp. BNC1]
 gi|110286546|gb|ABG64605.1| exodeoxyribonuclease III Xth [Chelativorans sp. BNC1]
          Length = 284

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 82/312 (26%), Gaps = 70/312 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             ++   ++ +WNIN                       L+ ++ +    D++ LQE    
Sbjct: 15  PELSMPFKVATWNIN----------------SVRLRLPLVLRFLEQYQPDVLCLQETKCP 58

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +               +  R + +          +  +A   +    + +     G  D 
Sbjct: 59  DD----------QFPTAAFRKVGYGHVEIHGQKGYHGVATISRLPLEVVERRSFCGLTDC 108

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                    +  L  ++G+++ + + ++ +    D  +   +P         Q ++D I 
Sbjct: 109 RH-------LSTLTNVDGRRVLLHNFYVPAG--GDEPDPEINPKFRHKLDFLQEMRDIIP 159

Query: 197 QKKESLVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKE 240
              ++    ++ GD N       + ++      +                   +    + 
Sbjct: 160 T-LDANTGSILVGDLNVAPLETDVWSHKQMLNVVSHTPVETEGLESVRKGGGWVDLMRRH 218

Query: 241 KDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                        +            +D+     +    L          +         
Sbjct: 219 IPPEEKLFTWWSYRAKDWSLSNRGRRLDHVWSSDDLAPALS-------RVDVLRDARGWD 271

Query: 291 RLSDHCPISIDY 302
           R SDH P+   +
Sbjct: 272 RPSDHVPVIAAF 283


>gi|262369657|ref|ZP_06062985.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315725|gb|EEY96764.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 817

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 91/331 (27%), Gaps = 50/331 (15%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFL 71
             A   Q+VR+ ++N+                  + +++      +    K +DAD+  L
Sbjct: 453 VPAKATQQVRIAAFNVLNYDNGLAQGFPTERGASSEAEFKKQHQKIVSALKAIDADVYGL 512

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            E+ +     +           S  + +     D       A+A+     RV       +
Sbjct: 513 MEIANNGYGERSAVAYLAQALGSDWKYVIPPNADKLGTDAIAVAIIYNAKRVKP---INV 569

Query: 132 GAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------C 181
            A        NR  +    +    GK   V+  HLKS       + +             
Sbjct: 570 AAVFDDQSQKNRVTMAQTFQALSGGKTFTVIPNHLKSKGSCPDDKISIEADQGDGQGCWN 629

Query: 182 SLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
               +  Q L  W+ +     S    ++ GD N         D        N  ++   +
Sbjct: 630 PTRVKAVQTLMQWVAKNPTQVSKPNVLLLGDLN----SYAKEDPILALEQANYKVLLNDE 685

Query: 240 EKDSRCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +      A                   +D+ + D   Y  + +     I  +E       
Sbjct: 686 KIGQGKAAYSYVFGVASNAQGYGGAGNLDHAIADAALYPLVKKAFALHINADEPTALDYN 745

Query: 290 -----------------KRLSDHCPISIDYD 303
                             R SDH P+ +D D
Sbjct: 746 EEYKTEEQIAAFYADDAYRSSDHDPVIVDLD 776


>gi|296161285|ref|ZP_06844093.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
 gi|295888443|gb|EFG68253.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
          Length = 270

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 79/303 (26%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN                   S    L Q+ +    DIV LQE+ + ++    
Sbjct: 4   LRIATFNING----------------IRSRLPALLQWLEREAPDIVCLQELKAADSA--- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +            +A+  K    L+    L G +D        
Sbjct: 45  -------FPVEELRDAGYGAIWQGQSAWNGVAILAKGEAPLESRRGLPGFEDDTHSRYLE 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV          I V  ++L +       +  Y  +          L     +  +S  
Sbjct: 98  AAV--------GGIVVACLYLPNGNPQPGPKFDYKLA------WFGHLIRHAAKLYKSGH 143

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN                         + ++ +              +     
Sbjct: 144 PVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYRQLLAQGWTDALRTHFGAERVYT 203

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          ID+ ++  +    L            D         SDH P  +
Sbjct: 204 FWDYFRRHWETNSGLRIDHVLLSADLAPRLRDAGV-------DRWVRGEPHASDHAPAWV 256

Query: 301 DYD 303
           + +
Sbjct: 257 ELE 259


>gi|283457216|ref|YP_003361786.1| exonuclease III [Rothia mucilaginosa DY-18]
 gi|283133201|dbj|BAI63966.1| exonuclease III [Rothia mucilaginosa DY-18]
          Length = 309

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/314 (8%), Positives = 76/314 (24%), Gaps = 66/314 (21%)

Query: 15  PCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            C+A    + +++ +WNIN                   +    +  +    D D++ LQE
Sbjct: 34  ACSAPAKLEGMKIATWNIN----------------SIRARENRVEDWLDEHDVDVLALQE 77

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             + +              +     + +       +    +A+  +      Q       
Sbjct: 78  TKTKDE----------TFPFDLFEFMGYEVAHFGLNQWNGVAIASRVGLEDVQRG-FDNQ 126

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                           +      + V  +++ +   L      Y           + L+ 
Sbjct: 127 PHFGKPGEPEVLEARAIGATCGGVRVWSLYVPNGRGLTDPHMDYK------LHWMEALRQ 180

Query: 194 WITQKKESLVP--FVIAGDFNRKINY-----------------LGNNDDFWKTIDPNDSL 234
            +  +  +       + GD+N                             +  +     +
Sbjct: 181 NVHNELAANPQSQLALVGDWNVAPEDADVWDIDYFLRNEMTHVSEPERCAFAALLEEGMV 240

Query: 235 IRFPKEKDSRCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                              +      + ID+ +        + +          D ++  
Sbjct: 241 DVVRPHTPGEYTYWDYQAGRFTKDEGMRIDFQLFSPALAARVERAWI-------DKVERA 293

Query: 289 GKRLSDHCPISIDY 302
           G+  SDH P+ ++ 
Sbjct: 294 GEGASDHTPVVVEI 307


>gi|260463071|ref|ZP_05811274.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
 gi|259031192|gb|EEW32465.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
          Length = 256

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 80/301 (26%), Gaps = 70/301 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                     L  +      D+V LQE+ + +     
Sbjct: 1   MKIATFNINNINS----------------RLENLLAWLAAARPDVVCLQELKARD----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  +    +     L G         +R
Sbjct: 40  -----MQFPRTALADAGYGAVWKGEPTWNGVAILARGAEPILTRDALPGD---DGDKQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I +  ++  +       +  Y  +          L     Q  ++ +
Sbjct: 92  YIEAAV-----NGIVIACLYAPNGNPRPGPKFQYKLAWHER------LNAHAEQLIDTGL 140

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+AGD+N                       +   F   ++   +     K  +     
Sbjct: 141 PVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRAAFAALLEQGWTDALRKKHPNETLYT 200

Query: 248 NK-NLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                RN+        +D+ ++ +   + L            D         SDH P+ +
Sbjct: 201 FWDYRRNRWPRDAGLRLDHILLSKTLARRLKGAGI-------DRDVRGQDGASDHAPVWV 253

Query: 301 D 301
           +
Sbjct: 254 E 254


>gi|325286474|ref|YP_004262264.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
 gi|324321928|gb|ADY29393.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
          Length = 311

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 82/320 (25%), Gaps = 51/320 (15%)

Query: 24  VRLVSWNINTLSEQEGVSL-----------WKNSVKRTTSDYTLLRQYAKNLD------- 65
           V +  +N+  L +                  + +  R       L +    +        
Sbjct: 2   VTIAFYNLENLFDTIDDPTTLDDDFTPKGEKRWTNNRYKKKVFKLTKTISEIGTHNTKEP 61

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
             ++ + E+ + N V  +   +            +         I T +   K    VL 
Sbjct: 62  PVLIGIAEVENENVVKDLVTNSNLERINYDYVHYDSPDE---RGIDTGLIYNKDYFTVLH 118

Query: 126 Q-SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSL 183
                +     +      R  + +  ++NG+++ V   H  S      + +     +  +
Sbjct: 119 SEPIHVHIINTNGDVDNTRDILYVHGKLNGEEVHVFVNHWPSKREGKITTDYKRIEAAKV 178

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           L      +++     K     +++ GDFN                  N S      EK  
Sbjct: 179 LINFMAKIEE-----KNPNPNYIVMGDFNDSPKSDSIQTLMDTNKFYNPSEHLLTFEK-- 231

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLI-------------------QESFSEILYNEDD 284
              +    R     D  ++  +   +                        F    +    
Sbjct: 232 --GSASYKRKWSLFDQIIISHSFLNYEKGTHSFLEANIFDEHFLTEFDGKFKGTPFRTYV 289

Query: 285 IKSRGKRLSDHCPISIDYDF 304
            +      SDH P+ I   +
Sbjct: 290 GRKYVGGYSDHFPVFIQLKY 309


>gi|229818864|ref|YP_002880390.1| 5'-Nucleotidase domain protein [Beutenbergia cavernae DSM 12333]
 gi|229564777|gb|ACQ78628.1| 5'-Nucleotidase domain protein [Beutenbergia cavernae DSM 12333]
          Length = 1577

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 93/342 (27%), Gaps = 64/342 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQ----------------EGVSLWKNSVKRTTSDYT------- 55
           +    VRL S+N+                      +GV++ +   +R   D         
Sbjct: 496 TGDDAVRLASFNVLNYFTTLGTDGATCVPYTDRAGDGVTVEEGCDQRGAWDAEDFQRQQD 555

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-------- 107
            +      LDAD+V L E+ +  A+ +   +    +  +                     
Sbjct: 556 KIVAAINGLDADVVGLMEIENSAALGETADEALGALVAALNAAAGADVWAFVPSSAELPP 615

Query: 108 ----NDIHTAIAVRKKNVRVLQQSYPL-LGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
               + I  AI  R   V  + +   L   + +    A  R  +  +    G    V  +
Sbjct: 616 VELQDVITNAIIYRPGAVTPVGEPRALGTQSAEGQPFANAREPIGQVFAPAGGGEDVFVV 675

Query: 163 HLK--------SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
                           +   +    S +    QA  L+DW+ Q   +     + GDFN  
Sbjct: 676 VNHFKSKGSPGPLPGDEDSGDGQGASNASRVAQATALRDWVGQVAAADDAVALLGDFNSY 735

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                 +  +       ++             +    R    +D+ +++  A        
Sbjct: 736 GQEDPLHVLYDAGYTDVEAHFDVDGS------SYSFGRQSGSLDHVLLNAPALARATGAD 789

Query: 275 FSEILYNEDDIKSR--------------GKRLSDHCPISIDY 302
             EI   E                      R SDH P+ +  
Sbjct: 790 IWEINSGEAVALEYSRHNYHGTLFYDATAYRSSDHDPVLVGL 831


>gi|305667408|ref|YP_003863695.1| hypothetical protein FB2170_14213 [Maribacter sp. HTCC2170]
 gi|88709456|gb|EAR01689.1| hypothetical protein FB2170_14213 [Maribacter sp. HTCC2170]
          Length = 252

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 83/286 (29%), Gaps = 42/286 (14%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++NI   ++++ V+ W +           L +  ++ +  I   QE   +         
Sbjct: 1   MTYNIKYDNKKDTVNNWNDRK-------ASLVRLIRHYEPSIFGTQEALHHQVKYIDEEL 53

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----SFSRAGN 142
             +                S+   +       K   +   ++ L    +     +  +  
Sbjct: 54  PDFSFIGVGRDDGKQKGEYSSIHYN-----HTKYKVLSSNTFWLSKTPNKISVGWDASME 108

Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           R     L E        +V + H                      + A+ +   I +   
Sbjct: 109 RICTYGLFEELETSNTFYVFNTHFDH------------RGKKAREKSAKLILKKIKKINS 156

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPIDY 259
           S +P ++ GDFN               +D  D+  +         N     ++    IDY
Sbjct: 157 SNLPVILMGDFNLNPVEKPIKSIKKVMVDGLDATQKPFYGPSGTFNGFNPTMKLDNRIDY 216

Query: 260 FVMDQNAYKFLIQESFSEILYN-EDDIKSRGKRLSDHCPISIDYDF 304
             +          ++     Y   DD     K +SDH P+ I  ++
Sbjct: 217 IFV----------KNIKVKSYTHIDDRMENNKHISDHLPVLIHIEY 252


>gi|107022880|ref|YP_621207.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|116686877|ref|YP_840124.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
 gi|105893069|gb|ABF76234.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|116652592|gb|ABK13231.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
          Length = 263

 Score = 90.8 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 56/280 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +R+ ++NI+                 +      +      LDAD++ LQE+      
Sbjct: 26  GRDLRIATYNIHG-----------GYGAWSARAVDRIAAVIDELDADVIALQEVPLGGTR 74

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
               P     +  +T             +     AV  +      ++  L     SF   
Sbjct: 75  ---APDVLAHLRDATGMHAAAGPTIDTPERRYGNAVLSRCPIRAARTLDL-----SFHPR 126

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A++  ++ +   I V+  HL               S S  S Q Q L   +     
Sbjct: 127 EPRGALDADIDCSTGPIRVVATHLGL-------------SASERSAQVQRL---LAAFDT 170

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             +P ++ GD N         + F +       + RF +    R            +D  
Sbjct: 171 GAMPVILLGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTVCPVFS--LDRI 219

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +               ++       +R +  SDH P+  
Sbjct: 220 WIHPG----------ELLVDVVVHRSARARHASDHYPLVA 249


>gi|295681288|ref|YP_003609862.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
 gi|295441183|gb|ADG20351.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
          Length = 290

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 88/313 (28%), Gaps = 58/313 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RLV WNI      +G             D   + + A+ L D D++ LQE+        
Sbjct: 1   MRLVDWNIQWGCGVDG-----------RVDLGRIVREARALCDFDVLCLQEVTRGFNEEP 49

Query: 75  --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                    S +  A++                  S   S +      A+  +       
Sbjct: 50  AAGGLKGAPSSDQFAELAALLPEMTVLDAIGSDLPSLGASRHRRQFGNAIVTRLPVRQVL 109

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            + L    D    +  R A+E ++E +   + V+  HL+ +   +            L Q
Sbjct: 110 RHSLPWPADPAKPSMLRVALEAVLETDVGPLRVISTHLEFYS--EKQRLAQVARLRELHQ 167

Query: 187 QAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           +A        + ++   PF         V+ GDFN                D    +  +
Sbjct: 168 EACDHARSPARGEKPDSPFADTARPLSAVVCGDFNSAFEDTAFCRMLEPIADAPTFVDAW 227

Query: 238 PKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +       A                  D+  + Q+    +                   
Sbjct: 228 ARAHPGEPRAATVGLYDHEQWPDGPFACDFVFVTQDLGTRIASCEV-----------DPH 276

Query: 290 KRLSDHCPISIDY 302
            R SDH P+ ++ 
Sbjct: 277 SRSSDHQPMWLEL 289


>gi|226531290|ref|NP_001144669.1| hypothetical protein LOC100277695 [Zea mays]
 gi|195645474|gb|ACG42205.1| hypothetical protein [Zea mays]
 gi|238007716|gb|ACR34893.1| unknown [Zea mays]
          Length = 373

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 93/335 (27%), Gaps = 72/335 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              +  + ++WN N+L            + R  SD+    Q    LD D++ +QE+    
Sbjct: 46  PTEEPFKFLTWNANSL------------LLRMKSDWPAFSQLVARLDPDVICVQEVRMPA 93

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A +K  PKN        +  ++  ++       +A   +   V          G      
Sbjct: 94  AGSKGAPKNP--SELKDDTSLSRDEKQVVLRALSASPFKDYRVWWSLSDSKYAGTAMFIK 151

Query: 139 RAGNRRAVELLV-------EINGKKIW--VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +    + V   +       E +G+ I        L +    ++       +     +  +
Sbjct: 152 KKFEPKKVSFNLDRTSSKHEADGRVIIAEFESFLLLNTYSPNNGWKEEENAFQRRRKWDK 211

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINY-------------------------------L 218
            + +++        P +  GD N                                     
Sbjct: 212 RMLEFVQHV---DKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYTPPNKEDCGQPGFTP 268

Query: 219 GNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYFVMDQNAYK 268
                F   +     +  +               S     K    ++ IDYF++ +    
Sbjct: 269 AERRRFGNILFQGKLVDAYRHLHKEKDIDGGFSWSGHPIGKYRGKRMRIDYFLVSEQLKD 328

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++           D     G   SDHCP+S++  
Sbjct: 329 RIVSCEMHGRGIELD-----GFYGSDHCPVSLELS 358


>gi|189460159|ref|ZP_03008944.1| hypothetical protein BACCOP_00795 [Bacteroides coprocola DSM 17136]
 gi|189433149|gb|EDV02134.1| hypothetical protein BACCOP_00795 [Bacteroides coprocola DSM 17136]
          Length = 253

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 80/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                       R+    LDAD   LQE          
Sbjct: 3   MKLISWNVNGLRACCDKGF---------------REIFNELDADFFCLQETKMQEG-QLD 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  ++  +       +   D   R    
Sbjct: 47  LAFEGYTSYWNYAEKKGY----------SGTAIFTRHQPLSVTYGLGIDEHDHEGR---- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +          +    L        +   
Sbjct: 93  -----VITLEMENFYLVTVYTPNSQDGLKRLDYRMTWEEDFRKYLLQL--------DRQK 139

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + ++ +     +  F     ++ N  
Sbjct: 140 PVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQLLLDAGFIDTFRHFYPTQENIY 199

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+        L        ++            SDHCP+ 
Sbjct: 200 SWWSYRFKAREKNAGWRIDYFLASSRIADKLQDAKIHTEIF-----------GSDHCPVE 248

Query: 300 IDYDF 304
           +  ++
Sbjct: 249 VTINW 253


>gi|88801882|ref|ZP_01117410.1| hypothetical protein PI23P_04447 [Polaribacter irgensii 23-P]
 gi|88782540|gb|EAR13717.1| hypothetical protein PI23P_04447 [Polaribacter irgensii 23-P]
          Length = 350

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/349 (11%), Positives = 86/349 (24%), Gaps = 56/349 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VR-LVSWNINTLSEQEGVSLWKN----------- 45
           M +K  L+L+     C A   +K   +R +  +N+  L +        +           
Sbjct: 1   MRKKIALSLLLITSLCAAYGQEKKYAIRTVAFYNLENLFDTINDPTMNDEASPMMELKFN 60

Query: 46  SVKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
                      L      +          I+ + E+ + + +  +               
Sbjct: 61  RSAVYWDKIEKLASTIAQIGLEKSKTSPAIIGVAEVENRSVLEDLIKS---KYLIKNNYG 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
           I H        I  A+  +KK    +              +   R  + +   ++ + I 
Sbjct: 118 IIHYDSPDKRGIDVALLYQKKYFNPVFHEVFNPNMYRENKKVFTRDQLLVSGYLDNEFIH 177

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           ++  H  S    ++         +    Q   + + I  K +     ++ GDFN      
Sbjct: 178 LIVNHWPSRSGGEAKSRPLREKAA---YQNLKIIEKIRTKDDC-AKIILMGDFNDDPINS 233

Query: 219 G-----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----- 268
                       K +  ND    +        N      N    D  ++           
Sbjct: 234 SFKKVLKTKRKKKNVGRNDLYNPYENMHRKGLNTLAYRDNLNLFDMILISSPFLDHGEKN 293

Query: 269 -----------------FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                               +  +    +            SDH P+ I
Sbjct: 294 FSSYKMYQAMIFNKRFLSDTKGKYKGYPFRSFSNGGYTGGYSDHYPVYI 342


>gi|255974862|ref|ZP_05425448.1| exonuclease III [Enterococcus faecalis T2]
 gi|255967734|gb|EET98356.1| exonuclease III [Enterococcus faecalis T2]
          Length = 257

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 78/306 (25%), Gaps = 78/306 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ +SWN+N L      +                      LDAD   LQE     A   
Sbjct: 6   TMKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQI 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  +++      +S          A++VR                         
Sbjct: 50  DLELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEG 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     ++ +   + +++  +  +               +         + ++ +  +  
Sbjct: 96  R-----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK 143

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N                   +       +  +  +     F          
Sbjct: 144 -PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGI 202

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYFV+ ++  + L+       +             SDHCP+
Sbjct: 203 YSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPV 251

Query: 299 SIDYDF 304
            +  DF
Sbjct: 252 EVVLDF 257


>gi|238897851|ref|YP_002923530.1| exonuclease III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229465608|gb|ACQ67382.1| exonuclease III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 268

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 82/309 (26%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                      L    +  D  ++ LQE   ++ +   
Sbjct: 1   MKFVSFNINGLRAHP----------------HQLAAIIEKHDPHLIGLQETKVHDDM--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +         H  +A+  K+  +  +       +D+      R
Sbjct: 42  -------FPLEEVRRHGYHVFYHGQKGHYGVALLTKDSPLAIRRGFPTDQEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   ++     I V++       F       +       ++  + L  ++TQ      
Sbjct: 90  RIIMADLKTPQGTITVIN-----GYFPQGESRLHPTKFPAKARFYEDLHRYLTQHFSVQS 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GDFN                          L     +++ +     +  F     
Sbjct: 145 HVLIMGDFNICPTDGDIGIGEQNRKRWLSSGKCAFLPEERAWFEHLQSWGLIDLFRVAYP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +      +  I           D      ++ S
Sbjct: 205 DYEHQYSWFDYRSKGFDENRGLRIDLLLASVPLARLAINSGI-------DYEIRGMEKPS 257

Query: 294 DHCPISIDY 302
           DH P+  ++
Sbjct: 258 DHAPVWSEF 266


>gi|163753669|ref|ZP_02160792.1| hypothetical protein KAOT1_18642 [Kordia algicida OT-1]
 gi|161325883|gb|EDP97209.1| hypothetical protein KAOT1_18642 [Kordia algicida OT-1]
          Length = 320

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 86/320 (26%), Gaps = 53/320 (16%)

Query: 25  RLVSWNINTLSEQEGVSL-----------WKNSVKRTTSDYTLLRQYAKNLDAD------ 67
            +  +N+  L + E                  + KR       L     +L  +      
Sbjct: 12  TIAFYNLENLFDTEDDKYVLDNDFLPESDRNWTPKRYDKKIYKLGSAISSLGPEDTKNAP 71

Query: 68  -IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
            +V + E+ +   +  +        +       N         I   +  +K++  V+  
Sbjct: 72  VLVGVAEVENKTVMQDLVDSKQLQEYNYDFVHYNSPDE---RGIDVGLLYQKEHFEVVHS 128

Query: 127 -SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
            S P+L   +  +R   R  + +   +N + I V   H  S     +             
Sbjct: 129 ESIPILIYNEEGNRDFTRDTLYVKGLLNNEPIHVFVNHWSSRRDGAAET------AYKRI 182

Query: 186 QQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           + A+ +++ I   Q +E+    +I GDFN         +         D      K    
Sbjct: 183 EAAKTVREKINYIQTEENDPHIIIMGDFNDDPTSESIQNYLM----DTDLYNPMEKLLTI 238

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDD 284
              +          D  +   N + +                        +    +    
Sbjct: 239 YKGSLNYRGEWNLFDQIIFTTNFFDYKKGTHSFASAAIFDEHFLTQWKGKYKGNPFRTYA 298

Query: 285 IKSRGKRLSDHCPISIDYDF 304
            +      SDH P+ I   F
Sbjct: 299 GRRYLGGYSDHFPVYIRLKF 318


>gi|229018928|ref|ZP_04175771.1| Exodeoxyribonuclease [Bacillus cereus AH1273]
 gi|229025172|ref|ZP_04181596.1| Exodeoxyribonuclease [Bacillus cereus AH1272]
 gi|228736105|gb|EEL86676.1| Exodeoxyribonuclease [Bacillus cereus AH1272]
 gi|228742371|gb|EEL92528.1| Exodeoxyribonuclease [Bacillus cereus AH1273]
          Length = 252

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPLSVTYGLGIDEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +   ++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFEDFHMITLYTPNSKRGLERLDYRMKWEDDFRAYIKRL--------DKKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +      +  A 
Sbjct: 139 PVIFCGDLNVSHKEIDLKNPKSNRKNPGFSDEEREKFTKILEEGFVDTYRFLYPEQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV  +     +            D   +     SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVTSERLKHKI-----------TDAKINSEIMGSDHCPVE 247

Query: 300 IDYDF 304
           +  DF
Sbjct: 248 LHMDF 252


>gi|116873216|ref|YP_849997.1| exodeoxyribonuclease III [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742094|emb|CAK21218.1| exodeoxyribonuclease III [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 251

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y + +DADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLKAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +                        + ++I    +   
Sbjct: 91  -----VITLEFEAFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYIK-NLDKTK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSKRLKDKLVDAKIHSEVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|90021640|ref|YP_527467.1| exonuclease III [Saccharophagus degradans 2-40]
 gi|89951240|gb|ABD81255.1| Exodeoxyribonuclease III [Saccharophagus degradans 2-40]
          Length = 272

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 64/286 (22%), Gaps = 59/286 (20%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                 L         D + +QE    +                  + + +         
Sbjct: 12  RIRLHQLEAVIAKHQPDFIGIQETKVSD----------PDFPVEAIQAMGYHVEFHGQKT 61

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           H  +A+  K+     Q   +   ++S      R  +      +GK+I V++       F 
Sbjct: 62  HYGVALMSKHPFNKVQKGYVTDTEESQK----RFILGEFTLPSGKQITVIN-----GYFP 112

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------- 217
                 +        +    L+  I    +     V+ GD N                  
Sbjct: 113 QGENRDHPIKFPNKLKYYADLQAHIEASYKPSDLLVVMGDMNISHTDLDIGIGESNRKRW 172

Query: 218 ---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PI 257
                        +   K +             +           +             I
Sbjct: 173 LKDGKCSFLPEEREWLDKLLGWGLVDTYRQTNPNLEEEQYSWFDYRSKGFEREPKRGLRI 232

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D  +      +  +           D      ++ SDHCPI  ++ 
Sbjct: 233 DLILASTALAQHSVASGI-------DYDIRGMEKASDHCPIWTEFS 271


>gi|52141752|ref|YP_085078.1| exodeoxyribonuclease III [Bacillus cereus E33L]
 gi|51975221|gb|AAU16771.1| exodeoxyribonuclease III [Bacillus cereus E33L]
          Length = 252

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L        +               +Y +  +ADI  LQE+        +
Sbjct: 1   MKFISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++ +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NVEDYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFEGFYIITLYTPNAKRGLERLDYRMKWEDDFRAYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +      +  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     +     +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERIKNQIKDAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|323526639|ref|YP_004228792.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
 gi|323383641|gb|ADX55732.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
          Length = 259

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 84/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +++ +WN+N+L                      +  + +    D++ LQE+         
Sbjct: 1   MKIATWNVNSL----------------KVRQQHVIDWLETSRTDVLCLQELKLPDEKFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +  +++ ++  N             I VR+            +     F    
Sbjct: 45  AELEEKGYRSWFAGQKTYN----------GVGILVREGLSVDEASVVRNIPG---FEDLQ 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + V+  +  +     + +  Y        +    L DW+  +   
Sbjct: 92  QRVVAATV-----DGVRVISAYFPNGQAPGTDKFAYK------LRWLAALHDWVRSEMAL 140

Query: 202 LVPFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNA 247
                + GD+N   +    +D      + +   +            L+   ++ D     
Sbjct: 141 YPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEFVRLTELGLVDAFRQFDQPEKI 200

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID+ ++ +   +              D +  +  + SDH P+
Sbjct: 201 YSWWDYRMMAFRRNAGLRIDHILLSKPLAETCTSCEV-------DKVPRKWDQPSDHAPV 253

Query: 299 SIDY 302
               
Sbjct: 254 VAQI 257


>gi|163802095|ref|ZP_02195991.1| exodeoxyribonuclease III [Vibrio sp. AND4]
 gi|159174236|gb|EDP59044.1| exodeoxyribonuclease III [Vibrio sp. AND4]
          Length = 268

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 84/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   V  Q     G          R
Sbjct: 42  -------FPIKDVEAMGYKVYFHGQKAHYGVAMLCKQEPVSVQK----GFPTDNEEHQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+K+ VL+       F       +        Q  + L  ++T    +  
Sbjct: 91  MIMATFEDENGEKVTVLN-----GYFPQGDNIAHETKYPYKRQFYKDLMTYLTDYHSNDE 145

Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ +T+        F     
Sbjct: 146 QLIVMGDINISSIDADIGIGEPNRKRWLKTGKCSFQPEEREWLQTLLSWGFEDTFRNLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +   +  K  I+        + D      ++ S
Sbjct: 206 EVDDRFSWFDYRSRGFDDNRGLRIDVILATPSLAKKCIES-------DIDYELRGIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 259 DHAPIWSTF 267


>gi|111221323|ref|YP_712117.1| putative exodeoxyribonuclease III [Frankia alni ACN14a]
 gi|111148855|emb|CAJ60533.1| Putative exodeoxyribonuclease III [Frankia alni ACN14a]
          Length = 298

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 82/304 (26%), Gaps = 69/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+ +WNIN                   +    L ++      D+V LQE   S +A  +
Sbjct: 1   MRIATWNIN----------------SAKARQARLIEWLDRAGPDVVCLQETKLSDDAFLE 44

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F ++ +           +      +     +A+  +           L     F     
Sbjct: 45  LFDEDLFR--------RGYRVAHHGDGRWNGVAILSRGSLDDVVRG--LPGGPGFPDPEP 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R             + V  +++ +   +D     Y  S          L+D +  +    
Sbjct: 95  RAIAATC-----DGVRVWSLYVPNGRTVDDPHYAYKLS------WLAALRDVVAAEVTRG 143

Query: 203 VPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            P +  GDFN                             + +D     +   +  D    
Sbjct: 144 -PLMTLGDFNIAPTDADVWDVAQFEGATHVTPAERAALGELVDAGLVDVLRTRWPDDVVY 202

Query: 247 ANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              + R         + ID  +   +    +            D    +G   SDH P+ 
Sbjct: 203 TYWDYRQLCFPKNFGMRIDLTLASADVADRVRAVWV-------DRAARKGTGTSDHAPVI 255

Query: 300 IDYD 303
           +D D
Sbjct: 256 VDLD 259


>gi|304396123|ref|ZP_07378005.1| exodeoxyribonuclease III [Pantoea sp. aB]
 gi|304356492|gb|EFM20857.1| exodeoxyribonuclease III [Pantoea sp. aB]
          Length = 272

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 81/311 (26%), Gaps = 73/311 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L+   +    D++ LQE   ++ +   
Sbjct: 5   MKFVSFNINGL----------------RARPHQLQALVEQHQPDVIGLQETKVHDDM--- 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   V                   R
Sbjct: 46  -------FPLEEVSKLGYHVFYHGQKGHYGVALLTKAQPVSVSR-----GFPDDDDESQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +        +  + L+  +T    +  
Sbjct: 94  RLIVAEIPSPIGDITVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQRLLTDDLPADK 148

Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           P +I GD N                        ++L    ++   +     +  +     
Sbjct: 149 PVLIMGDMNISSTDLDIGIGEDNRKRWLRTGKCSFLPEEREWMDRLLSWGLVDTWRVHNP 208

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  ++ +N     ++          D      ++ S
Sbjct: 209 EVADRFSWFDYRSKGFDDNRGLRIDLVLVSKNLASHCVETGI-------DYAIRSMEKPS 261

Query: 294 DHCPISIDYDF 304
           DH PI   + F
Sbjct: 262 DHAPIWSTFRF 272


>gi|295689833|ref|YP_003593526.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
 gi|295431736|gb|ADG10908.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
          Length = 283

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 72/290 (24%), Gaps = 36/290 (12%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
             + +    ++S+NI   + ++                  + +       DI+ +QE   
Sbjct: 23  VQAQSPSFWVMSYNIRYDNPED--------RPDWRMRREPMARQISFFSPDILGVQEALV 74

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                       +  +       + +   +     +A   R           P    K +
Sbjct: 75  PMVADLSAALPGYAHYGVGRDDGDKAGETTTIFYRSARFERLLAQTRWCSPTPERPGK-A 133

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  A  R    +++      + +   +                        A+ L+D   
Sbjct: 134 YDAALPRTYARVVLRDRASGVLLDVRNAHLDHVG----------AESRRLCARQLRD--- 180

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254
           Q        V+ GDFN        +D      D                    +      
Sbjct: 181 QPTWPGARLVVLGDFNSAPGE-PPHDVLTSGGDGLRDARAASPIVFGPAGTFNDFSPGAP 239

Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              PIDY  +D+             + +        G  +SDH PI +  
Sbjct: 240 PVGPIDYVFVDRAL---------QVLRFATLTDTEGGVAISDHFPIIVQI 280


>gi|260462207|ref|ZP_05810451.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
 gi|259032067|gb|EEW33334.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
          Length = 371

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/367 (12%), Positives = 103/367 (28%), Gaps = 86/367 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTT----------------SDYTLLRQ------- 59
            +RL ++N+  L  +   S ++N +                         + Q       
Sbjct: 2   SLRLATFNVENLMNRFDFSGYRNQLNEDRTLALFDIQSEAEYKMLEQARAIAQSDDMRQL 61

Query: 60  ---YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                    AD++ +QE+ +  A+        + +     R    +  + +  I  AI +
Sbjct: 62  TALAIAATRADVICMQEVDNIEALKAFEYGYLFKMVGQGYRQKYTTSGNDSRGIDVAIMM 121

Query: 117 R--------------KKNVRVLQQSYPLLGAK------DSFSRAGNRRAVELLVEINGKK 156
           R                   V  + + L   +       +  R   R  +E+ + + G  
Sbjct: 122 RNETAQGQPIEFVRMTSYAHVTYEQFGLYTPELAALGNQANERVFRRDCLEIDITVGGVP 181

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212
           + +  +H KS     +  +    +  +   +AQ ++  I Q+      +   + I GD N
Sbjct: 182 LTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIIEQRFGVDHAADKRWAICGDMN 241

Query: 213 RKINYLGNNDDFWKTID----------------PNDSLIRFPKEKDSRCNANKNLRNKI- 255
                +    D +                       S     +  +       + R    
Sbjct: 242 DYRQRVKIAGDEFDGYRFEVVDEAQSCIDVLTAGGFSENIVERRPEMNRWTFYHTRGPEE 301

Query: 256 ----PIDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                +DY ++ +                   +       + +           + SDHC
Sbjct: 302 RHLCQLDYILLSKGLAAKNATAVPDIIRNGQPWRTIFPAGQEVERFPRAGWDRPKASDHC 361

Query: 297 PISIDYD 303
           P++I  D
Sbjct: 362 PVAITLD 368


>gi|134095562|ref|YP_001100637.1| putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans]
          Length = 237

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/270 (9%), Positives = 75/270 (27%), Gaps = 56/270 (20%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++Q+  +   D++ LQE  + +               +      +    +    +  +A+
Sbjct: 1   MQQWLVDNPVDVLCLQETKTVDE----------KFPVAEIEAAGYQVAFTGQKTYNGVAI 50

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             ++              +       +R +   +    + I ++  ++ +    DS +  
Sbjct: 51  LSRHPITDVTKN------NPLLDDEQQRIIAGTI----QGIRIVCAYVPNGQSPDSDKYI 100

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPND- 232
           Y           + L +W+ Q+++      + GD+N        +D      + +     
Sbjct: 101 YK------LNWLKALHEWLAQEQQQHPELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPE 154

Query: 233 ----------SLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQE 273
                           +  +           +           ID+ ++           
Sbjct: 155 RAAFVRLQEMGFTDAFRMFEQPEKLYSWWDYRQMGFRLNRGLRIDHILLSAPLAARCSAC 214

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    D +  + ++ SDH P+    D
Sbjct: 215 VI-------DKVPRKWEQPSDHTPVIATID 237


>gi|119898073|ref|YP_933286.1| hypothetical protein azo1782 [Azoarcus sp. BH72]
 gi|119670486|emb|CAL94399.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 280

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 82/277 (29%), Gaps = 52/277 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+N++    ++G             D   + +    L  DIV LQE+ +    +  
Sbjct: 23  LRISSYNVHRCVGRDG-----------RMDVARVARVIDELGCDIVGLQEVDNLANGSHE 71

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +    +    I       N++     A+  +   +  + + L     S+ R   R
Sbjct: 72  SMQLDFLASATGMEAIA-GHTIVNHEGSFGNALLTRRPVLAVRRHDL-----SYHRREPR 125

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+++ +E+  + + V+  HL                 +    Q + +   +        
Sbjct: 126 GAIDVDLEVKDEVVRVIVTHLGLRP-------------AERRFQVRQMLKLL-HDIPPER 171

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V+ GD N  +            +            +     +  +      +D   + 
Sbjct: 172 NVVVLGDINEWLPLGRPLRWLHGLL-----------GRAPAERSFPSGLPLFALDRVWVR 220

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         +L  E       +  SDH P+  
Sbjct: 221 PR----------HTLLAFETHRSPTARIASDHLPVKA 247


>gi|312198907|ref|YP_004018968.1| exodeoxyribonuclease III Xth [Frankia sp. EuI1c]
 gi|311230243|gb|ADP83098.1| exodeoxyribonuclease III Xth [Frankia sp. EuI1c]
          Length = 305

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 77/305 (25%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+ +WNIN                   +    L ++      D+V LQE      A A+
Sbjct: 1   MRIATWNIN----------------SAKARQARLIEWLDRAQPDVVCLQETKLDDEAFAE 44

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F ++ +           +      +     +A+  +                 F     
Sbjct: 45  NFDEDLFR--------RGYRYAHHGDGRWNGVALLSRAGLDDVARG--FAGDPGFPEPEP 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R             I V  +++ +    D     Y        +    L+D + +     
Sbjct: 95  RAIAATC-----GGIRVWSLYVPNGRTPDDPHYAYK------LRWLAALRDTVAEVAAH- 142

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +  GDFN                            + +     +    + +      
Sbjct: 143 QPVMALGDFNIAPTDADVWDPADFVGATHVTEPERAALRELTGVGLIDVL-RARWPDETV 201

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +         + ID  +   +  K +            D    +G   SDH P+
Sbjct: 202 YTYWDYRALCFPKNMGMRIDLTLAGADVAKRVAAVYV-------DRAARKGTGTSDHAPV 254

Query: 299 SIDYD 303
            +D D
Sbjct: 255 IVDLD 259


>gi|87198182|ref|YP_495439.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM
           12444]
 gi|87133863|gb|ABD24605.1| Exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM
           12444]
          Length = 259

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 81/304 (26%), Gaps = 72/304 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ S+NIN                   +    L ++ +     +  LQE+ + +    
Sbjct: 2   TLKVASFNING----------------IKARLPRLLEWLEETRPSVACLQEIKTQDE--- 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDSFSRAG 141
                           I +            +A+       V  Q       +D  SR  
Sbjct: 43  -------GFPAEEFEKIGYRAIWHGQKGFNGVAILADGEQPVEVQRGLAGDPEDEHSRY- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +E +   + V+ I+L +       +  Y        +  + L+  +      
Sbjct: 95  --------LEADVFGLRVVCIYLPNGNPQPGPKFDYK------LRWMERLRARMADIASE 140

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            VP ++ GD+N                       + D + + ++   +            
Sbjct: 141 EVPALVIGDYNVIPEDKDTFSVKAMASDALMQPESRDAYRRLLNDGWTDAIDLFNPQGGV 200

Query: 246 NANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + +           ID+ ++       L+           D      ++ SDH P+
Sbjct: 201 WTFWDYQAGAWQRDHGFRIDHALLSPELADRLVAAGV-------DKDYRGREKASDHAPV 253

Query: 299 SIDY 302
            +  
Sbjct: 254 WVTL 257


>gi|282864842|ref|ZP_06273896.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
 gi|282560267|gb|EFB65815.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
          Length = 796

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/327 (11%), Positives = 75/327 (22%), Gaps = 69/327 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQEMGSYNA 79
            ++ + ++N+  L   +             + +  L           D+V L+E+   N 
Sbjct: 492 DELAVATYNVENLDALDD-----------QAKFDTLASGVAVNLSSPDVVSLEEIQDDNG 540

Query: 80  V-----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                             A V        +       N    +   +I          V 
Sbjct: 541 AVNDGTVGSEATLKRFTDAIVAAGGPRYSWRYVAPENNKDGGEPGGNIRNVFLFNPGRVS 600

Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
            + ++                      P      S +   +R+ +       G+ ++V+ 
Sbjct: 601 FVDRAGGDATTAVEAVKTRKGATLSVSPGRINPTSTAWDSSRKPLVGEFRFRGEPVFVIG 660

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKI 215
            H  S      L   Y      S +   +QA  +  ++T   ++      V  GD N   
Sbjct: 661 NHFASKGGDQPLHGRYQEPERGSETQRVRQAAEVNTFVTSLLKADRSARVVTLGDLNDFA 720

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                                          +     N   +D+ +              
Sbjct: 721 FSP----AMDALTRGRVLKPLITTLPRGEQYSYVYDGNSQTLDHILTSPGIR-------- 768

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                          + SDH P  +  
Sbjct: 769 RLDYDVVHINAEFADQASDHDPQIVRI 795


>gi|229157316|ref|ZP_04285394.1| Exodeoxyribonuclease [Bacillus cereus ATCC 4342]
 gi|228626043|gb|EEK82792.1| Exodeoxyribonuclease [Bacillus cereus ATCC 4342]
          Length = 252

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 86/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQDGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEEYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFEDFYIITLYTPNSKRGLERLDYRMKWEDDFRVYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                   +     + +  I     +  +     ++  A 
Sbjct: 139 PVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPNQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARVKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|297203458|ref|ZP_06920855.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083]
 gi|197716336|gb|EDY60370.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083]
          Length = 259

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 78/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ LQE     A    
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESTGTDVLCLQEAKVAEA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   R   +            +AV  +          L G          R
Sbjct: 41  ------QFPFDQLREAGYEAAVHATGRWNGVAVISRVGLDDVVKG-LPGDPGYDGAPEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +        V  +++ +   +D     Y        Q  + LK  +        
Sbjct: 94  A-----ISATCGPARVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGSR 142

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N         D                   ++         P+      +  
Sbjct: 143 PFAVLGDYNVAPTDDDVYDVAAFEGLTHVTPAERAALASLREAGLSDVVPRPLKYD-HPF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +++  K              D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNESFAKA-------VTDAYVDREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|167586711|ref|ZP_02379099.1| Exodeoxyribonuclease III xth [Burkholderia ubonensis Bu]
          Length = 258

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/300 (9%), Positives = 77/300 (25%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLAQSGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +    L      +           +
Sbjct: 35  LKLPDDKFPRADLEAAGYRSWFTGQKTYNGVAILAR--DTLPFDESDVTRNVPGFDDPQQ 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + + ++       ++  +  +    DS +  Y        Q    L  W+  + +   
Sbjct: 93  RVIAVTIDGT----RIISAYFPNGQAPDSDKFVYK------MQWLDALNAWLRSELQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAGLLELGLVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++     +              D      ++ SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSPALAETCTSC-------VVDRTPRTWEQPSDHTPVVA 255


>gi|237799461|ref|ZP_04587922.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022317|gb|EGI02374.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 261

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 88/298 (29%), Gaps = 51/298 (17%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F      S +  + +++ N++                        LR+  +++ ADIVFL
Sbjct: 8   FGPATPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRSVSADIVFL 57

Query: 72  QEMGSYNAVA----KVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQ 125
           QE+           K +P  +   F +     +  + +     D     A+  K   +  
Sbjct: 58  QEVHGEQQSHARSVKGWPTISQYEFLADAMWSDFAYGRNAVYPDGDHGNALLSKYPIIQH 117

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           ++  +            R  +  ++++      V  + +    F            S   
Sbjct: 118 ENLDISIDG-----TEQRGLLHCILDVPNHG-HVHAVCVHLGLF-----------ESHRR 160

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           QQ + L + + +      P ++AGDFN               +        F +   +  
Sbjct: 161 QQLKLLAELMAR-LPEGEPVIVAGDFNDWRQRAD------ALLHGTGLHEVFVERFGAPA 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +       + +D   +           S   +             LSDH P++++  
Sbjct: 214 KSFPARWPLLRLDRIYVRNA-----TSHSPKVLS------SRPWSHLSDHAPLAVELT 260


>gi|229197850|ref|ZP_04324566.1| Exodeoxyribonuclease [Bacillus cereus m1293]
 gi|228585568|gb|EEK43670.1| Exodeoxyribonuclease [Bacillus cereus m1293]
          Length = 252

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 82/305 (26%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L        +               +Y +  +ADI  LQE+        +
Sbjct: 1   MKFISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NVEGYYTYW-----------NYAVKKGYSGTAIFSKEEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFEDFYIITLYTPNSKRGLERLDYRMKWEDDFRVYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +      +  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     +     +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|90409139|ref|ZP_01217258.1| hypothetical protein PCNPT3_10586 [Psychromonas sp. CNPT3]
 gi|90309747|gb|EAS37913.1| hypothetical protein PCNPT3_10586 [Psychromonas sp. CNPT3]
          Length = 347

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/338 (12%), Positives = 96/338 (28%), Gaps = 54/338 (15%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +    +++ ++N+   ++         S     +       +  Y      D++  QE+
Sbjct: 7   TTPTTPIKICTFNLFNYAQPPYAYYDFESIYSDVQWAKKQAWICAYLARFKPDVIAFQEV 66

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL---QQSYPLL 131
            S +++ K+  +  +  ++S       S      D   AIA R               L 
Sbjct: 67  FSIDSLQKLLKEAGY-AYFSVVDAPTLSDGFIYRDPVLAIASRYPIKETYALGVDPTLLA 125

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSL------- 183
               S   + +R+ +   +E+    +     +HLKS   L                    
Sbjct: 126 PLGLSADFSFSRKVLRASIELPHIGLCDFYVVHLKSKRSLFEYYPDAKERIEKTILGRLK 185

Query: 184 ------------LSQQAQWLK-DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                          +A  L    + ++++  +P V+ GDFN  +     +      +  
Sbjct: 186 AQLSGGWGSTVQRGSEALLLHMAILERREKLGLPVVLLGDFNNNLEDGVLSQLLKHELRF 245

Query: 231 NDSLI--------------------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
                                       +E       +   +  + +D+ ++        
Sbjct: 246 VTGAQDKQYLDKYCLKNAWDLYQKADPERESQPCPGTHYFAQQWVTLDHILLSSEFDTSA 305

Query: 271 IQESFSEILYNEDD------IKSRGKRLSDHCPISIDY 302
            Q  FS   ++         I    ++ SDH  + I  
Sbjct: 306 SQCFFSVSAHHTHVQHLVCPIFEYDQQSSDHGVVMITL 343


>gi|119776077|ref|YP_928817.1| extracellular nuclease [Shewanella amazonensis SB2B]
 gi|119768577|gb|ABM01148.1| extracellular nuclease [Shewanella amazonensis SB2B]
          Length = 865

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/378 (11%), Positives = 100/378 (26%), Gaps = 88/378 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTS----DYTLLRQYAKNLDA 66
               +    +R+ S+N+          +      N    T        T +      ++A
Sbjct: 455 APVVAEKGDIRVASFNVLNFFNDVVGGDANPTGSNRGALTEEEMLLQRTKIVNAITAMNA 514

Query: 67  DIVFLQEMGSY-----NAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113
           DIV L E+ +      +A+  +           N +      E      K   N+ I   
Sbjct: 515 DIVGLMEIANNGFGEKSAIQNLLDALNAEQSADNAYSFVEIAEADKTDGKYFGNDAITVG 574

Query: 114 IAVRKKNVR------------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
           +  R   V                   V  +                R ++    ++  +
Sbjct: 575 MLYRAAKVSPEGTAFVIETPEQHAPEGVASRDNKGTVETSPAQDKYQRHSLGQTFKVKDE 634

Query: 156 KIWVLDIHLKS---FCFLDSLENTYSPS--------CSLLSQQAQWLKDWITQKKES--- 201
            + V+  HLKS    C  D +    S           +     A+ + + +   +     
Sbjct: 635 NLTVVVNHLKSKGSGCLEDWINFDESRDPADLQGKCNAFRVSAAKVIGEAVKDIEGDVLV 694

Query: 202 ---------LVPFVIAGDFNRKINYLGNNDDFWKTI-------------DPNDSLIRFPK 239
                      P  +  D++   +        + T+                  +    +
Sbjct: 695 IGDLNAYGMEDPVRVLTDYDATTSNRKVKTASYTTLAGQSYEQQGSVIEKGYGLINLNTQ 754

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ + +++  K ++      I   E ++   GK+        
Sbjct: 755 VHGADTYSYSYNGELGNLDHALGNESLAKRVVDIEDWHINSVESNLFEYGKKFTGSLEKS 814

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ +   +
Sbjct: 815 ENAFSASDHDPVIVALSY 832


>gi|328873522|gb|EGG21889.1| hypothetical protein DFA_01775 [Dictyostelium fasciculatum]
          Length = 296

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 86/308 (27%), Gaps = 51/308 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q +R++S+NI   S ++G++ W N          L+    K     I+  QE        
Sbjct: 11  QTLRIMSFNIRYDSHKDGINNWVN-------RRNLVVDTIKQTKPTIIGFQECLKNQIEE 63

Query: 82  KVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +      +                S    +  +                +    S+   
Sbjct: 64  IINDLGGDYSFVGVGRDDGLSKGEYSPIAYNNKLVRYDHGSHFWISQDCYVAGSKSWDTM 123

Query: 141 GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             R A     + +    K  + L+ HL                  L   +   L      
Sbjct: 124 CPRIATWGKFKYHNNSKKSFYTLNTHLDHMSS-------------LARSEGTLLIKSFVS 170

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKT---------------------IDPNDSLIR 236
             +  +P +I GDFN ++      +   K                      +       +
Sbjct: 171 HLDPSIPCIITGDFNEEVGSKPYRNIIDKMDDMVGHKYMNMLKIPIAPTYSLKTFKDCSK 230

Query: 237 FPKEKDSRCNANK--NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
               +D   +         K+ IDY  ++ +    +      ++L     I++ G + SD
Sbjct: 231 AANNRDGPFHTFTGFTDEYKVTIDYIFVNAS----VKSVDKFQVLTGHLKIETDGLKPSD 286

Query: 295 HCPISIDY 302
           H PI  D 
Sbjct: 287 HLPIYADL 294


>gi|149278560|ref|ZP_01884696.1| exodeoxyribonuclease III (exonuclease III) [Pedobacter sp. BAL39]
 gi|149230555|gb|EDM35938.1| exodeoxyribonuclease III (exonuclease III) [Pedobacter sp. BAL39]
          Length = 260

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                    +L ++      D+V LQE+   +     
Sbjct: 1   MKIATYNINGVNG----------------RLPVLLRWLAKAQPDVVCLQELKCES----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    +      +            +A+  K+     ++              +R
Sbjct: 40  -----YRFPVTAINDAGYQAIWRGEKSWNGVAILSKSEIRELRTDLPGEDASYQH---SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                        + +  I+L +       +  Y        +    L D       + +
Sbjct: 92  YIEGFTF-----GMVIGCIYLPNGNPYPGPKFDYK------LRWFSRLADHGRTLLNTGL 140

Query: 204 PFVIAGDFNRKINYLGNND-------DFWKTIDPNDSLIRFP-------KEKDSRCNANK 249
           P ++ GD+N     L             ++                   +E         
Sbjct: 141 PVMLVGDYNVMPTELDTYKPEKYLDNALFREESRKAYADLVAQGWIDAIRELYPGERIYT 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +D+F+++      L        +   D      ++ SDH P+ I
Sbjct: 201 FWDYMRNAYGRNAGLRLDHFLLNPVLAGRLK-------VAKVDKEVRGWEKASDHAPVWI 253

Query: 301 DYD 303
           +  
Sbjct: 254 ELS 256


>gi|296393768|ref|YP_003658652.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985]
 gi|296180915|gb|ADG97821.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985]
          Length = 267

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 72/307 (23%), Gaps = 68/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   +       + +    D++ LQE    NA    
Sbjct: 1   MRIATWNIN----------------SIRARADRAVAWLERSQVDVLALQETKCANA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  R   ++   + N     +A+  +      +                 
Sbjct: 41  ------QFPEAPFREAGYAVAHTGNGQWNGVAIVSRLGLGDVRIGFDGQPGFHKDPEAPA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201
                 +      + +  +++ +   L      Y             LKD        + 
Sbjct: 95  EPEPRAIAATCGGVRIWSLYVPNGRDLADRHYRYKLD------WLAALKDQAEGWLAADP 148

Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                +AGD+N                           F+             +      
Sbjct: 149 EAKIALAGDWNIAPFDEDVWDPSLFEGKTHTSAPERAAFFAF--EQAGFTDVARPHTPGP 206

Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                               ID+ +      + +   S        D  + +GK  SDH 
Sbjct: 207 GLYTYWDYTQLRFPRREGMRIDFVLGSPALARAVQGASV-------DREERKGKGASDHA 259

Query: 297 PISIDYD 303
           P+ +D +
Sbjct: 260 PVVVDLE 266


>gi|116251598|ref|YP_767436.1| exodeoxyribonuclease [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256246|emb|CAK07327.1| putative exodeoxyribonuclease [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 264

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 82/303 (27%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ K    D+V LQE+ + +A    
Sbjct: 1   MKIATYNVNGING----------------RLDILSRWLKEDTPDVVCLQELKTDDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  K    +     L G  D        
Sbjct: 41  ------RFPRKEIERAGYGAIWHGQRSWNGVAILAKGKIPILTRRGLPGDPDDTHSRYIE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV          I V  ++L +       +  Y        +  + L ++  +  E  V
Sbjct: 95  GAV--------DGILVGCLYLPNGNPFPGAKFDYK------LRWFRRLHEYAAELLELEV 140

Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P ++AGDFN                  +   +                 +          
Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRRAYADLVAQGWTDAVRHLHPEERIYT 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +             ID+F++      +L   +               +  SDH P+ I
Sbjct: 201 FWKYWRNSFERDAGLRIDHFLLSPAVAPWLRSATVR-------KKPRGWEHTSDHAPVMI 253

Query: 301 DYD 303
           + D
Sbjct: 254 ELD 256


>gi|332703871|ref|ZP_08423959.1| exodeoxyribonuclease III [Desulfovibrio africanus str. Walvis Bay]
 gi|332554020|gb|EGJ51064.1| exodeoxyribonuclease III [Desulfovibrio africanus str. Walvis Bay]
          Length = 254

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 80/305 (26%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N      G +                  + +   AD+V LQE        K+
Sbjct: 1   MKLLSWNVNGFRAVAGKNF---------------LDWLRASAADVVCLQE-------TKL 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           +P+         +         +    ++ +A       +        G  D+  R   R
Sbjct: 39  WPEQITEQELHPDGYTGVWNSHATRKGYSGVASLFTRKPLSTS----FGLPDARFRGEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  ++ ++ +++  +                     A  L+           
Sbjct: 95  L-----ICLEYERFYLCNVYFPNGQKGGERLRFKLGYYDAFLDYALELRKH--------K 141

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+ GDFN                             + +      +   +  +     
Sbjct: 142 PVVVCGDFNTAHKEIDLAHPAANAHTSGFLPEERQWLDRFV--AAGFVDTFRLFEPGGGH 199

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDYF + +     + +                G   SDHCP+
Sbjct: 200 YTWWSYFTKARERNVGWRIDYFFVSEELRGAVKRAWIE-----------PGVPGSDHCPV 248

Query: 299 SIDYD 303
            ++ D
Sbjct: 249 GLELD 253


>gi|269124631|ref|YP_003298001.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
 gi|268309589|gb|ACY95963.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
          Length = 268

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 88/287 (30%), Gaps = 31/287 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + V + S+N   L                   Y  +  + ++ D D+V  QE+ ++  
Sbjct: 5   AGRGVTVASFNTRGLPLFGSNLA---------ERYRAIAAFFESSDIDVVNFQEVFTHRH 55

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +  +           + R + + +             R    +   + +PLL +     R
Sbjct: 56  LRLLSAGMP------SFRHLAYRRALVGPAGGLVTLSRLPTGKSGYRRFPLLPSSPGLPR 109

Query: 140 A-GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               + A++  +    +   V  I+       D   +  +    L   Q   L   + + 
Sbjct: 110 TVRFKAALKGALITPLRDQGVCVINTHPVANGDGDWSDANRFRPLQQGQLTALARLVQEI 169

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-- 256
           ++   P V+ GDFN   +   + D           L+            +  L+      
Sbjct: 170 ED---PVVVCGDFNVARDSTLHRDFLAT-----TGLVDAFAGSCPPTFHSAYLKPGQRPH 221

Query: 257 -IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+ ++ ++         F++     + +      LSDH  +    
Sbjct: 222 CIDFILVAKSIGVESTGTLFTDR----EPLAGGPSYLSDHIGLYARL 264


>gi|49474410|ref|YP_032452.1| exodeoxyribonuclease III [Bartonella quintana str. Toulouse]
 gi|49239914|emb|CAF26312.1| Exodeoxyribonuclease III [Bartonella quintana str. Toulouse]
          Length = 260

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 87/303 (28%), Gaps = 66/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNI                    + +  L Q+ +    DIV LQE+ S +     
Sbjct: 1   MKIATWNIAG----------------IKARHETLYQWLQQNQPDIVCLQEIKSTDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------NFPCDAIESLGYHIETHGQKSFNGVAILSKKTPDEVIRRLPGNNNDEQTRY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   N   I V  ++L +   + S + +Y        +  + L            
Sbjct: 92  --IEAVYSTNKGVIRVASLYLPNGNPVKSEKYSYK------MEWMERLYAHAKSLLAYEE 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                   +L    + ++ I             D+   + 
Sbjct: 144 PLVLAGDYNVIPTPLDAKNPQKWSNDALFLPQTRNAFQRIVHLGFYDAIRNVTDTPSFSF 203

Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +         N I ID+ ++   A   L       I            + SDH P+ ID
Sbjct: 204 WDFQAGAWHKNNGIRIDHLLLSPEAVDQL-------ICAYSQTEVRGYPKSSDHAPVWID 256

Query: 302 YDF 304
            +F
Sbjct: 257 LNF 259


>gi|229061336|ref|ZP_04198683.1| Exodeoxyribonuclease [Bacillus cereus AH603]
 gi|228717951|gb|EEL69596.1| Exodeoxyribonuclease [Bacillus cereus AH603]
          Length = 252

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPISVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFDDFYMITLYTPNSKRGLERLDYRMEWEDDFRAYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  +     +  +      +  A 
Sbjct: 139 PVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTCVLEAGFIDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     +I    +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVISERLEHKIIDAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  DF
Sbjct: 248 LHIDF 252


>gi|213966791|ref|ZP_03394942.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato T1]
 gi|213928641|gb|EEB62185.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 365

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 103/343 (30%), Gaps = 75/343 (21%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C+ +V        Q +++++WNI  L+                  + + +    +
Sbjct: 35  LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 94

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   +A ++P +T   ++  E + 
Sbjct: 95  LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 154

Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156
             H        + T       +   LQ   P+  A     +   + A+ +      +G K
Sbjct: 155 SPHIWGSVGRKLTTLSRFHIDSAERLQLPVPVPDANIISRQFQPKNALLVSYLPLRDGGK 214

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI- 215
           + V++ HL +    D              +Q    ++ + + +    P++I GDFN    
Sbjct: 215 LAVINTHLATAKPGDG----------TAHEQIAATENLLDKLEGGGTPWLIGGDFNLLPL 264

Query: 216 -----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPI------ 257
                      +    + +     +    +    +   +  +    +  N   I      
Sbjct: 265 GQYQRLPEQQRHGYAADSELHALWEKYPMIPNNTESSGTDRSQWLTHFPNDSRINGPDRT 324

Query: 258 -DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            DY     +  +     S      +          +SDH P+ 
Sbjct: 325 VDYLFYSPSLKR----VSARVRRDDTLL-------ISDHLPVI 356


>gi|83718560|ref|YP_442749.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           thailandensis E264]
 gi|257138960|ref|ZP_05587222.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           thailandensis E264]
 gi|83652385|gb|ABC36448.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia thailandensis E264]
          Length = 286

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 52/308 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+SWNI    +  G           T D       A+ L D D++ +QE+        
Sbjct: 1   MRLISWNIQWGRDANG-----------TVDLARTIDAARGLGDFDVLCMQEVTRGFHALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              S +  A++         +    +                A+  +        + L  
Sbjct: 50  GGPSGDQYAELAALLPGYAVFDAIGVDLPPLGPGAPRRQFGNALATRLPVERAMRHALPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              + + +  R A+E+ +      + V+  HL+ +            +   L ++A    
Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVIVTHLEYYSA--QQRLAQVDALRRLHREAAAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------ 237
                 +    PF         ++ GDFN                D    +  +      
Sbjct: 168 RASAPPETPTGPFAPSARAADAIVCGDFNSAYRSEAYRRFLAPFPDAPRFVDAWLARHPG 227

Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             P       +  +     +  D+  +       + +                  R SDH
Sbjct: 228 KTPPMTAGVYDTGQWSEGPMTCDFAFVTDTLAHRISRCEI-----------DGATRASDH 276

Query: 296 CPISIDYD 303
            PI ++  
Sbjct: 277 QPIVLELS 284


>gi|269123835|ref|YP_003306412.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis
           DSM 12112]
 gi|268315161|gb|ACZ01535.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis
           DSM 12112]
          Length = 597

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 104/324 (32%), Gaps = 63/324 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77
           + + S+N+   +          S +RT      ++        DI+ L E+G        
Sbjct: 289 INIASYNVENYAHV-------VSPERTVQFAKQVKDKLNT--PDIITLIEVGDDDGPTTS 339

Query: 78  ---------NAVAKVFPK--NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                     A+        N    + + +          + +I  AI  RK  V++++ 
Sbjct: 340 DVVSSEKNGQALIDAIRDETNIEYGYLAVDPEYGKDGGMPSMNIRNAILYRKDRVKLIES 399

Query: 127 S----------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
           +                       P     DS      R+ +  L ++NGK ++++ +HL
Sbjct: 400 NKSTSYDNTKVILDNNGKAKLKYNPGRIGLDSEYFVATRKPLVALFDVNGKHLYIIGVHL 459

Query: 165 KSFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYL 218
            S    D +          S    ++QA ++ +++ +   K+     V+ GD N      
Sbjct: 460 SSKRGDDPIYGPQQPPIRRSEVNRNKQATYINNFVKEILSKDKDASIVVMGDINDYDFST 519

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
            + +     I  N+ +    +   ++  +         +D   +++     +  +     
Sbjct: 520 TSKN-----IRGNELIDVMGELAPNKRYSYVYGGMSQVLDNMFINKEYSGKVNVDVIRIN 574

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
                +        SDH P+ I +
Sbjct: 575 P----EFTKAQGAFSDHDPVFIQF 594


>gi|218530329|ref|YP_002421145.1| 5'-nucleotidase domain protein [Methylobacterium chloromethanicum
            CM4]
 gi|218522632|gb|ACK83217.1| 5'-Nucleotidase domain protein [Methylobacterium chloromethanicum
            CM4]
          Length = 2796

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 87/350 (24%), Gaps = 72/350 (20%)

Query: 19   SVAQKVRLVSWNINTLSEQ-----------EGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
             V   +++ S N+                        NS +        L        AD
Sbjct: 1281 PVGGTLKVGSLNVLNYFTTLDTGSAARTAIGQQPRGANSPEELARQTEKLVTTLIGTGAD 1340

Query: 68   IVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRD------SNNDIHTAI 114
            ++ L E+ +        NA+  +  +        T   IN   +         + I    
Sbjct: 1341 VLGLTEIENQFRPGDPGNALEYLVGQLNLRAGAGTYASINPGAQLDQGQFLGGDAIAVGF 1400

Query: 115  AVRKKNVRVLQQSYPLLGAKDSFSRAGN------------------RRAVELLVE--ING 154
              +   V V   +          +                      R A+ +       G
Sbjct: 1401 IYKPSKVSVAMNTTIERLDDTDVAAFNPALLQQSTLGHLFNGANTSRAALAVTFNEIATG 1460

Query: 155  KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVI 207
            +    +  H KS     +  +          QQ     A  L  W++ +         ++
Sbjct: 1461 EDFTAIINHFKSKGGTGTGADADQGDGQGAWQQQRELAATALAQWVSMRPTGTQDSDTLL 1520

Query: 208  AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
             GDFN  +     +      I          +++ +   +         +D+ +   +  
Sbjct: 1521 LGDFNAYLKEDALD------ILRAAGFTNLAEDRLANPYSYVFDGAYGALDHALASASLN 1574

Query: 268  KFLIQESFSEILYNEDDIKSRGKRL---------------SDHCPISIDY 302
            + +   +   I  +E D                       SDH P+ +  
Sbjct: 1575 RQVTGVTEWHINADEADAIDYNLDFGRSPRSFDGRSPARESDHDPVLVGL 1624


>gi|254561286|ref|YP_003068381.1| hypothetical protein METDI2865 [Methylobacterium extorquens DM4]
 gi|254268564|emb|CAX24521.1| hypothetical protein, putative 5'-nucleotidase domain
            [Methylobacterium extorquens DM4]
          Length = 2796

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/350 (11%), Positives = 87/350 (24%), Gaps = 72/350 (20%)

Query: 19   SVAQKVRLVSWNINTLSEQEG-----------VSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
             V   +++ + N+                        NS +        L        AD
Sbjct: 1281 PVGGTLKVGTLNVLNYFTTLDTGSAARTAIGLEPRGANSPEELARQTEKLVTTLIGTGAD 1340

Query: 68   IVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRD------SNNDIHTAI 114
            ++ L E+ +        NA+  +  +        T   +N   +         + I    
Sbjct: 1341 VLGLTEIENQFRPGDPGNALEYLVGQLNLRAGAGTYASVNPGAQLDQGQFLGGDAIAVGF 1400

Query: 115  AVRKKNVRVLQQSYPLLGAKDSFSRAGN------------------RRAVELLVE--ING 154
              +   V V   +          +                      R A+ +       G
Sbjct: 1401 IYKPSKVSVAMNTTIERLDDTDVAAFNPALLERSTIGHLFNGANTSRAALAVTFNEIATG 1460

Query: 155  KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVP--FVI 207
            +    +  H KS     +  +          QQ     A  L  W++ +         ++
Sbjct: 1461 EDFTAIINHFKSKGGTGTGADADQGDGQGAWQQQRELAATALAQWVSMRPTGTQDSDTLL 1520

Query: 208  AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
             GDFN  +     +      I          +++ +   +         +D+ +   +  
Sbjct: 1521 LGDFNAYLKEDALD------ILKAAGFTNLAEDRLANPYSYVFDGAYGALDHALASASLN 1574

Query: 268  KFLIQESFSEILYNEDDIKSRGKRL---------------SDHCPISIDY 302
            + +   +   I  +E D                       SDH P+ +  
Sbjct: 1575 RQVTGVTEWHINADEADAIDYNLDFGRSPSSFDGRSPARESDHDPVLVGL 1624


>gi|308176289|ref|YP_003915695.1| extracellular nuclease [Arthrobacter arilaitensis Re117]
 gi|307743752|emb|CBT74724.1| putative extracellular nuclease [Arthrobacter arilaitensis Re117]
          Length = 638

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/338 (14%), Positives = 92/338 (27%), Gaps = 64/338 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWK-----------------------NSVKRTTSDYTLL 57
              V + S+N+       G  L                          + +      + +
Sbjct: 303 GGNVSVGSFNVLNYFTTTGDMLDGCSYYTDREGNPINVRGGCDARGAATAESFERQQSKI 362

Query: 58  RQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                   AD+V L+E+ +          A+A +  +            +        ++
Sbjct: 363 VSALGEFTADVVVLEEIENSARFGQNRDAALANLVNELNEEAGDEVWSYVPTPSVVPADE 422

Query: 110 --IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
             I TAI  R K V+ + +S  L     S +R    +A + +      +  V+  H KS 
Sbjct: 423 DVIRTAIIYRDKAVKPIDESVILDDPAFSNARDPLAQAFQRVGGNQNTRFLVVANHFKSK 482

Query: 168 C--FLDSLENTYSPSCS-----LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYL 218
                D   N                QA+ L  +  + K+  +    ++AGDFN      
Sbjct: 483 GSNPDDGSGNADKGDGQGAWNVARVAQAEALVGFADELKKLRNTDQVLLAGDFNSYAAED 542

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                  + +     +        +   +         +D+    +     +  E    I
Sbjct: 543 P-----MQVLIEAGYVDL---GAAADSQSYLYDGFVGSLDHIFASEKLAGKVTGEDIWNI 594

Query: 279 LYNEDDIKSRG--------------KRLSDHCPISIDY 302
              E                      R SDH P+ +  
Sbjct: 595 NAIESVGYEYSRYNNNITNLFTADQYRSSDHDPVLVGL 632


>gi|291561139|emb|CBL39938.1| exodeoxyribonuclease III [butyrate-producing bacterium SS3/4]
          Length = 284

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 76/302 (25%), Gaps = 78/302 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++SWN+N L    G                   +Y K  DADI  +QE         + 
Sbjct: 36  KMISWNVNGLRACLGKGF---------------LEYLKESDADIFCIQESKLQEGQVDL- 79

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++      +          +  A+  K   +       +   D   R     
Sbjct: 80  ELPGYHQYWNYAEKKGY----------SGTAMFTKEEPIAVTYGLGIEEHDHEGR----- 124

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++     + +V+  +  +        +             + L+        +  P
Sbjct: 125 ----VITAEFPEYYVVTCYTPNSQDGLKRLDYRMQWEDAFRAYLKELE--------TKKP 172

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +  GD N                           +  +     +  F      +     
Sbjct: 173 VIFCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKFTELLEAGFVDTFRYFYPDQEGIYS 232

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + ++    L+       +             SDHCP+ +
Sbjct: 233 WWSYRFSARAKNAGWRIDYFCVSESLKDRLVDAKIHTEV-----------MGSDHCPVEL 281

Query: 301 DY 302
           D 
Sbjct: 282 DI 283


>gi|302541699|ref|ZP_07294041.1| exodeoxyribonuclease III [Streptomyces hygroscopicus ATCC 53653]
 gi|302459317|gb|EFL22410.1| exodeoxyribonuclease III [Streptomyces himastatinicus ATCC 53653]
          Length = 259

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 78/302 (25%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE     A    
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCAEAA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   R + +    +       +AV  +       S  L G  D       R
Sbjct: 42  -------FPFEPLRELGYEAAVNATGRWNGVAVLSRVGLDEVVSG-LPGGPDYEGDQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                        + V  +++ +   +      Y        +    L++ + +  +   
Sbjct: 94  AIAATC-----GPVRVWSVYVPNGREIGHPHYDYK------LRWLDTLREAVGEDAKGPR 142

Query: 204 PFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GDFN                         +    +         P+      +  
Sbjct: 143 PFAVLGDFNVAPTDDDVWDRTRFDGLTHVTDKEREALAALRGAGLSDVVPRPLKYD-HPF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +                   D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRELCFPKNRGMRIDLVYGNGAFADA-------VGDAYVDREERKGKGASDHAPVV 254

Query: 300 ID 301
           +D
Sbjct: 255 VD 256


>gi|229168476|ref|ZP_04296199.1| Exodeoxyribonuclease [Bacillus cereus AH621]
 gi|228614882|gb|EEK71984.1| Exodeoxyribonuclease [Bacillus cereus AH621]
          Length = 252

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 84/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPISVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFDDFYMITLYTPNSKRGLERLDYRMEWEDDFRAYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  +     +  +      +  A 
Sbjct: 139 PVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTCVLEAGFIDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     +     +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVISERLKHKITDAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|193215019|ref|YP_001996218.1| endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium
           ATCC 35110]
 gi|193088496|gb|ACF13771.1| Endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium
           ATCC 35110]
          Length = 344

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 80/299 (26%), Gaps = 45/299 (15%)

Query: 2   IRKYVLALVFFLVPCTASV-----AQKVRLVSWNINTLSEQEGVS-------LWKNSVKR 49
           I+ + L L+ ++  C + +        + L  WN+  L +                  + 
Sbjct: 3   IKPFFLLLLGWIFFCQSPLFSQNKPDSLLLAWWNVENLFDTTDDPQTKDEEFTPNGKKQW 62

Query: 50  TTSDYTL----LRQYAKNLD---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96
           T          L Q   ++           DI+   E+     +  +F         S  
Sbjct: 63  TEVRLAQKMKNLAQVILDMKTAPIASGKMPDIIGFCEVEHQALLDTLFC----DYIKSRN 118

Query: 97  RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
               + + +    I    A  K  ++V              +   +R  +E+  E+ GK 
Sbjct: 119 YAFIYKETEDFRGIDIGFAYDKNRLQVKS----FKAHPVVINEEHSRDILEVEFEVQGKT 174

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           + V   H  S               + + +            K      V+ GDFN +  
Sbjct: 175 LVVFGNHWPSRSGGKKRSEPKRAKAAAILRA----AIDARLAKNPSADIVLLGDFNDEPK 230

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMDQNAYK 268
                    K     + + +    +   C        +         +D+ ++ +    
Sbjct: 231 SPSIKKSL-KANGSFEEVKQASDGRLYDCWKGSDAPGSYIYKNEWNKLDHAIVSKGLLD 288


>gi|119897033|ref|YP_932246.1| hypothetical protein azo0742 [Azoarcus sp. BH72]
 gi|119669446|emb|CAL93359.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 249

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 86/286 (30%), Gaps = 48/286 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------SY 77
           +R+ ++NI+    Q    +  +           LR+  ++LD D+VFLQE+       S 
Sbjct: 3   LRICTYNIHKGFSQFNRRMVVHD----------LRERLRSLDVDLVFLQEVQGLHLRHSR 52

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                        +         +      +  H   A+  ++  +   +  +     S 
Sbjct: 53  RHADWPAHPQYEFLAEDVWHQTAYGGNAVYDHGHHGNAILSRHAILSSDNQDV-----SD 107

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  +   V++ G+   V  + +       S             +Q + L + + +
Sbjct: 108 HRFERRGLLHCEVQLPGEDTVVHCVCVHLGLMAGS-----------RRRQMEALAERMER 156

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P +IAGDFN   N+  +             +  F         +  +      +
Sbjct: 157 LAPDGAPLIIAGDFNDWRNHADS-----VLCRRLGLVEAFGAGSVRPPRSFPSALPLFRL 211

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +            F               R+SDH  ++ D +
Sbjct: 212 DRIYVRG----------FQVRRAEVHYG-EPWSRISDHAALTADLE 246


>gi|326388588|ref|ZP_08210181.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206839|gb|EGD57663.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 261

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 83/304 (27%), Gaps = 71/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                        + ++      D++ LQE+        +
Sbjct: 2   IEIATWNIN----------------SVRLRIDQVERFLTQEKPDVLCLQEI---KCAENL 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +                S    +  +A+  +            G +D  +    R
Sbjct: 43  FPREMFERLGYGHM------AVSGQKGYHGVAIVSRLPLRE------TGREDWQANGEAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + VEI G  +++ ++++ +   +         +     Q+  +L+      +    
Sbjct: 91  ---HVGVEILGHDLFLDNVYIPAGGDVPD-----REANPKFGQKLDFLERMTRWSEGLDR 142

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GDFN         D                   +    +D +    K   +    
Sbjct: 143 PTLLVGDFNIAPLECDVYDHKALLKVVSHTPVEVEALGRLAAAHDWVDLGRKHIPAPERN 202

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           +D+               F E          R ++ SDH P+
Sbjct: 203 YSWWSYRSYWRAKDQGRRLDHMWASPEVAARSQGHRFVEET-------RRWEQPSDHIPL 255

Query: 299 SIDY 302
              +
Sbjct: 256 ITGF 259


>gi|256395293|ref|YP_003116857.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256361519|gb|ACU75016.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 252

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/281 (11%), Positives = 77/281 (27%), Gaps = 33/281 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R++S N                  +       L +   + D D+V LQE+    +   
Sbjct: 3   KIRVLSLNTLY-------------KDKPRVRLRALAEVLADSDYDVVCLQELSLPPSFGL 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR-AG 141
           +         Y+       +           +    +   V  + + +       +    
Sbjct: 50  IRSLTKTSFPYAAHGTRLPTVAG-------GLLTLSRVPLVGHRYHVVAAPAKWRADVVM 102

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +     ++G+   V + HL      D   +  +P   +   +   +   I +  +S
Sbjct: 103 RRGVLVARFAVDGEFFTVTNTHLSPNHETD--WSQAAPFTRVQQAELARMAQAIRR-IDS 159

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P +  GDFN   +        ++       L        +         +   +D  +
Sbjct: 160 GEPVIAVGDFNVPRDS-----WLFEGFQAASGLRDAFDGDAATTFRPVPGWDGAALDQIL 214

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +               +         + + LSDH  ++   
Sbjct: 215 VSPGVPAKAE----VVMQEKVRMGDGQDRYLSDHYGVAATI 251


>gi|144899913|emb|CAM76777.1| Endonuclease/exonuclease/phosphatase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 256

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 87/303 (28%), Gaps = 71/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+ +WNIN                   +    +  + ++   D++ LQE+         
Sbjct: 2   VRIATWNIN----------------SVKARLPNVMDWLQSAKPDVLLLQEIKCQ---DDG 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                     +  +A+  ++     Q        D  +R    
Sbjct: 43  FPTLDFQS-------AGWQVAVHGQKSYNGVAILSRHTLDNVQIRLPGDEADEQARY--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ + + + +  ++L +       +  Y        +  + L D      +  +
Sbjct: 93  ------IQADIQGLRIASLYLPNGNPCPGEKFDYK------LRWMRRLVDHSKTLLDQGM 140

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PFV+ GD+N         D                 ++ +        F           
Sbjct: 141 PFVLGGDYNICPTDADVYDPAGWADDALCRPESRALFRELCHLGLTEAFRALHPQPGLYT 200

Query: 249 KN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N + ID+F++   A   LI         + D      ++ SDH PI I
Sbjct: 201 FWDYQAGAWPRGNGLRIDHFLLSPAAADRLIAC-------DIDKEPRGREKASDHTPIWI 253

Query: 301 DYD 303
           D +
Sbjct: 254 DLN 256


>gi|333030057|ref|ZP_08458118.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
 gi|332740654|gb|EGJ71136.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
          Length = 339

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/350 (11%), Positives = 86/350 (24%), Gaps = 62/350 (17%)

Query: 2   IRKYVLAL------VFFLVPCTASVAQKVRLVSWNINTLSE-------QEGVSLWKNSVK 48
           ++K ++ L      +FFL+ C         +  +N+  L +        +   L     +
Sbjct: 1   MKKIIITLSVALIGLFFLLSCKKKAETIYSIAFYNVENLFDTIHDSGKNDYEYLPDGRRE 60

Query: 49  RTTS----DYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
                       + Q    L  D       ++ L E+ ++  +  +  +      Y    
Sbjct: 61  WDREKYTNKLKNIAQVLSELSRDRVKEGPVVIGLAEVENFRVLQDLISEPALKNEYQFVH 120

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
                KR     I  A+    K               +  +    R  + +   +  +++
Sbjct: 121 YEGPDKR----GIDCALLYNPKLFTPTASVLVPSTPFEGDTIHKTRGFLVVTGNVADEEM 176

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
             +  H  S           +P     + Q + + D +          V+ GD N     
Sbjct: 177 TFIVNHWPSR-------GAKAPVRVHAANQVKAITDSLYA-VNKKAKIVVMGDLNDDPMD 228

Query: 218 LGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--- 268
                                    +   +D               D  ++ Q   K   
Sbjct: 229 ESVSVAFGAKKFVKDVKKGGFYNPWWEILEDKGVGTLMYRGAWNLFDQIIISQPLLKAKK 288

Query: 269 ---------------FLIQESFSEILYNEDDIKSRGKRLSDHCP--ISID 301
                          F     +          ++     SDH P  I ++
Sbjct: 289 GLRYVDSEVFMRDYLFQKTGKYKGSPLRTHGGQTWLNGYSDHLPTIIYVE 338


>gi|260170561|ref|ZP_05756973.1| hypothetical protein BacD2_01735 [Bacteroides sp. D2]
 gi|315918907|ref|ZP_07915147.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313692782|gb|EFS29617.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 366

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 85/299 (28%), Gaps = 68/299 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++N++  + ++                  +  Y +NL ADI+  QE      +   
Sbjct: 110 LTVATYNVDAFNHEDTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F  ++     S                   +AV  +     +       +K+        
Sbjct: 155 FGVDSIAAVLSDWPYYFIP-ISPEGKHLLQLAVFSRYPIKEENLIVYPDSKNCS------ 207

Query: 144 RAVELLVEINGKKIWVLDIHLKSF-------------CFLDSLENTY---------SPSC 181
             +   +E NG+ I + + HL++                 DS                + 
Sbjct: 208 --LWCDIETNGRTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQRVERAAVGLIDGLHENF 265

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
              + QA  LK  I     S  P ++ GDFN   +    +      +        F    
Sbjct: 266 RKRAAQANTLKQLI---AASPYPTIVCGDFNSLPSSYVYHTVKGDKLQDG-----FQTSG 317

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                  K  ++ + IDY +                   N  D  S     SDH P+ +
Sbjct: 318 HGYMYTFKFFKHLLRIDYILHSPEL--------------NSTDYFSPDLTYSDHNPVVM 362


>gi|255971866|ref|ZP_05422452.1| exonuclease III [Enterococcus faecalis T1]
 gi|255962884|gb|EET95360.1| exonuclease III [Enterococcus faecalis T1]
          Length = 257

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 78/306 (25%), Gaps = 78/306 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ +SWN+N L      +                      LDAD   LQE     A   
Sbjct: 6   TMKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQI 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  +++      +S          A++VR                         
Sbjct: 50  DLELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEG 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     ++ +   + +++  +  +               +         + ++ +  +  
Sbjct: 96  R-----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK 143

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N                   +       +  +  +     F          
Sbjct: 144 -PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGI 202

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYFV+ ++  + L+       +             SDHCP+
Sbjct: 203 YSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPV 251

Query: 299 SIDYDF 304
            +  DF
Sbjct: 252 EVVLDF 257


>gi|256419904|ref|YP_003120557.1| endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM
           2588]
 gi|256034812|gb|ACU58356.1| Endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM
           2588]
          Length = 371

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 94/325 (28%), Gaps = 62/325 (19%)

Query: 4   KYVLALVFFLVPCT----ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           K + A V F  P +    A+ A  + ++S+N+                K +  +   +  
Sbjct: 81  KSISAFVAFNYPTSGKQFANPAGSLTIMSYNVAQFGLY--------REKDSKYNREAMFA 132

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             K  + DIV LQ+  +         +               S  + +   H    +  +
Sbjct: 133 LIKKQELDIVCLQDFYTSEKKNDFNNREDISREMKLPYRFFSSDFNRDGMQHWGSIIYSR 192

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN---- 175
              +      +     S S       +   +  NG  I ++++HL S+ F +        
Sbjct: 193 YPIIKSDKLKMSYGPRSES------LIYADIVKNGDTIRIINMHLASYRFNERDYRSIEK 246

Query: 176 -----------------TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
                                +    S+QA  +  +I+       P ++ GDFN      
Sbjct: 247 IKKQEDTGLVATRNIVQKMRDAYVDRSKQADIVSAFISTCP---YPVILCGDFNDTPASY 303

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                        D    F ++          L   + IDY   D++             
Sbjct: 304 TYFTI------RGDLQDAFLRKGSGIGRTYAGLAPTLRIDYIFTDKS------------- 344

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
            +  +  +     LSDH P+  +  
Sbjct: 345 -FKVNSFRKINSTLSDHYPVIANVS 368


>gi|124025252|ref|YP_001014368.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL1A]
 gi|123960320|gb|ABM75103.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL1A]
          Length = 275

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 86/302 (28%), Gaps = 63/302 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                   S    ++++      DI+ LQE  + +       
Sbjct: 3   VATWNVN----------------SIRSRIDHVKEWLITNKIDILCLQETKTEDKF----- 41

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                        + +    S    +  +A+  +      +        D    +     
Sbjct: 42  -----FPIENFSDLGYEVSISGQKSYNGVAIISRFPINNIKIGFNEVINDYQDLSILSEQ 96

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
             + +  +   I ++++++ +   ++S +  Y           + L+ ++ +  ++  P 
Sbjct: 97  KRI-ISADINDIRIINVYVPNGSSINSDKFIYKKK------WLECLQVYLREINKNNTPI 149

Query: 206 VIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANKNL 251
            + GDFN        +                + +       L    +  +         
Sbjct: 150 CLLGDFNIAPEDRDIHTPSRYEESIMASSKERELLKDALGGELEDVFRIFEPGEKNWSWW 209

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+  + ++                 D  +   ++ SDH P+ +D 
Sbjct: 210 DYRHSAWERDKGWRIDHIYLTEDILSCANSCWI-------DKEQRSREKPSDHAPVVVDI 262

Query: 303 DF 304
           ++
Sbjct: 263 NW 264


>gi|328541797|ref|YP_004301906.1| exodeoxyribonuclease III [polymorphum gilvum SL003B-26A1]
 gi|326411549|gb|ADZ68612.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1]
          Length = 269

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/309 (9%), Positives = 78/309 (25%), Gaps = 68/309 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++ + +WNIN                       ++ ++      D++ LQE    +A 
Sbjct: 2   TDRLTIATWNIN----------------SVRLRLPIVEKFILEQAPDVLCLQETKCPDA- 44

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        +  +L       +    +  +A   +      +        D+    
Sbjct: 45  --------NFPEAAFRKLGYPHIAINGQKGYHGVATISRRPLANIEKRGFCDKGDARH-- 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                + + V  +   + V + ++ +    D  +   +P           +K W+   + 
Sbjct: 95  -----IAVDVAFSDSPLRVHNFYVPAG--GDEPDAAINPKFGHKLDFMAEMKAWLNGAET 147

Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTI--------------DPNDSLIRFPKEKDSR 244
              P V+ GD N     + + ++    K +                   +    +     
Sbjct: 148 E-RPAVLVGDLNVAPYEHDVWSHKALLKIVSHTPVETELLEAIRSHGGWIDAMRRFVPME 206

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+  +       L                    + SD
Sbjct: 207 EKLYTWWSYRARDWAAADKGRRLDHVWVSPPLADRLKA-------MRVLRAARGWDKPSD 259

Query: 295 HCPISIDYD 303
           H P+   ++
Sbjct: 260 HAPVIAVFE 268


>gi|282864972|ref|ZP_06274026.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE]
 gi|282560397|gb|EFB65945.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE]
          Length = 259

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 74/304 (24%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ LQE          
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQETKCT------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +    +       + +  +       +  L    +       R
Sbjct: 39  ----LEQFPAEALREAGYESAVNATGRWNGVGLLSRVGLTDVVTG-LPDGPEYEGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                        + V  +++ +   +      Y        +  + L+  +       V
Sbjct: 94  AVSAAC-----GPVRVWSVYVPNGREVAHDHYAYK------LRWLEALRKAVAADAAGPV 142

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GDFN                         D    +         P+      +  
Sbjct: 143 PFAVLGDFNIAPTDDDVWDPSLFEGATHVTPAERDALAALRAGGLSDVVPRPLKYD-HPY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +      +            D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLGFPKNRGMRIDLVYGNAPFAAAVQDSYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|209518265|ref|ZP_03267091.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160]
 gi|209501285|gb|EEA01315.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160]
          Length = 290

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 86/313 (27%), Gaps = 58/313 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           ++LV WNI      +G             D   + + A+ L D D++ LQE+        
Sbjct: 1   MKLVDWNIQWGCGVDG-----------RVDLGRIVREARALCDFDVLCLQEVTRGFNEDP 49

Query: 75  --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                    S +  A++                  S   S +      A+  +       
Sbjct: 50  AAGGLKGAPSSDQFAELAALLPEMTVLDAIGSDLPSLGASRHRRQFGNAIVTRLPVRQVL 109

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            + L    D    +  R A+E ++E +   + V+  HL+ +     L          L Q
Sbjct: 110 RHSLPWPADPAKPSMLRVALEAVLEADIGPLRVISTHLEFYSEKQRLAQVAR--LRELHQ 167

Query: 187 QAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           +A        + ++   PF         ++ GDFN                D    +  +
Sbjct: 168 EACNHARAPARGEKPDSPFADTARPISAILCGDFNSAFGDAAYCRMLEPIADAPAFVDAW 227

Query: 238 PKEKDSRCNANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                                       D+  + Q+    +                   
Sbjct: 228 AGAHSGAPRVATVGLYDHEQWPDGPFACDFVFVTQDLSTRVASCEV-----------DPH 276

Query: 290 KRLSDHCPISIDY 302
            R SDH P+ ++ 
Sbjct: 277 SRSSDHQPMWLEL 289


>gi|56697356|ref|YP_167724.1| exodeoxyribonuclease III [Ruegeria pomeroyi DSS-3]
 gi|56679093|gb|AAV95759.1| exodeoxyribonuclease III [Ruegeria pomeroyi DSS-3]
          Length = 268

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 88/306 (28%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  +  +   D+  LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------IKARAEALPAWLDSAQPDVALLQEIKS---VDES 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +           ++           +A+  K               D  +R    
Sbjct: 42  FPREMF-------EERGYNVETHGQKGFNGVAILSKLPLEDVSRGLPGDDSDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +E  V +  + + +  ++L +   ++   S +           +  + L+   T+   
Sbjct: 92  --IEATV-VGKQALRLCGLYLPNGNPVELTESGDPVPGGKYDYKLRWMERLQARATELMA 148

Query: 201 SLVPFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCN 246
           +  P ++AGD+N                D  ++                   + +     
Sbjct: 149 AEEPALMAGDYNIIPQAEDAKRPEAWREDALFRPESRAAFRRILNLGFTEAFRARVQGPG 208

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+F++   A   +            D       + SDH P
Sbjct: 209 HYSFWDYQAGAWNRNDGIRIDHFLLTPQAADLMRDCGI-------DKEVRGRDKPSDHVP 261

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 262 VWVELD 267


>gi|329906029|ref|ZP_08274330.1| Endonuclease/exonuclease/phosphatase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547361|gb|EGF32191.1| Endonuclease/exonuclease/phosphatase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 264

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 87/299 (29%), Gaps = 58/299 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+ ++NI+             S   +      L+Q    + A++ FLQE+   + V  
Sbjct: 2   KIRIATYNIH----------KGVSSFGSKPRIVALKQALATMQANVYFLQEVQGRHDVLA 51

Query: 83  VFPKNTW------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                +W                 +      +  H   A+         ++  +     S
Sbjct: 52  ARHAASWPGQSQHDFLAGDSHQAVYGMNAVYDHGHHGNALLSNLPIASSRNQDV-----S 106

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             +  +R  +  ++ ++   +    +HL  F                  +QA+ L + + 
Sbjct: 107 DHKYESRGILHCVIHLDDLPVHCYVVHLGLFAGG-------------RRRQAEALIEAVL 153

Query: 197 QKKESLVPFVIAGDFNRKINYLGN--------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
                  P +IAGDFN   N+L           + F + +          + +       
Sbjct: 154 DSAPPGAPVIIAGDFNDWGNHLSEALRSRLGVTEVFDERVPSVGMGSFLRRLRGPDAKIQ 213

Query: 249 KNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                        +D   +          +S   +        +   RLSDH PI    
Sbjct: 214 PARTFPAMLPFLQLDRIYVRG-----FAIDSAEVLH------GALWARLSDHAPIVATL 261


>gi|254441056|ref|ZP_05054549.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 307]
 gi|198251134|gb|EDY75449.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 307]
          Length = 333

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 95/331 (28%), Gaps = 52/331 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--------LLRQYAKNLDADIVFLQEMG 75
           +++ ++N+   S     +       R +  +          L      LDAD + + E  
Sbjct: 1   MKIATYNVEWFSNLFDNAGKLYDDDRWSGRWDVTRAQHTTALGAVFAALDADGIMVIEGP 60

Query: 76  SYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             +A          +   +            ++             + V          +
Sbjct: 61  DSHAKRDGAAALEGFAARFGIRARQAVIGYVNDTQQEILFLYDPDVLNVRHDPRIDGAPR 120

Query: 135 D-------------SFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTY--S 178
                               ++  +EL V  I+G    ++ +H KS     +  +     
Sbjct: 121 FDGAIKLDLDVDAQPDDVRWSKPPLELEVTHISGTVFRLIGVHAKSKAPHGAKTDAQVMR 180

Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226
            S     +Q      L+  +  +  +    ++ GDFN           F +         
Sbjct: 181 ISIENRRKQLAQCIWLRRRVEAQLAAGDNLIVLGDFNDGPGLDEYEKLFGRSGVEIVLGE 240

Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNA----YKFLIQ 272
                  DP+  +    +   +   A   +          +DY ++ Q+      K++I 
Sbjct: 241 GQGEQLFDPHARMALSQQIGAAPVTARFTVGPDRRFLSALLDYIMVSQSVRAMGAKWVIM 300

Query: 273 ESFSE-ILYNEDDIKSRGKRLSDHCPISIDY 302
             F +   + + D+ +     SDH P+ +D 
Sbjct: 301 HPFDDPKCFADKDLCAALLTASDHFPVVLDI 331


>gi|311070625|ref|YP_003975548.1| exodeoxyribonuclease III [Bacillus atrophaeus 1942]
 gi|310871142|gb|ADP34617.1| exodeoxyribonuclease III [Bacillus atrophaeus 1942]
          Length = 252

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 86/304 (28%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        + +              Y +  + DI  LQE+   +   K+
Sbjct: 1   MKLMSWNVNGLRALLTKMNFNS--------------YLEEENVDIFCLQEIKLQDGQIKL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  + ++++      +          +  A+  K   +       +   D   R    
Sbjct: 47  EPE-GYHVYWNYAEKKGY----------SGTAIFTKKEPLAVTYGLGIKEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  + ++V+ ++  +        +             + L        +   
Sbjct: 93  ------ITLEFENMYVITVYTPNAKRGLERIDYRMDWEDAFLSYIKAL--------DVKK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                         + +  +     +  F      +  A 
Sbjct: 139 PVVLCGDLNVAHQEIDLKNPKANRKNAGFSDQERERFSQMLEEGFIDTFRYLHPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYF++ +   K +        +             SDHCP+ 
Sbjct: 199 SWWSYRMNARAKNVGWRLDYFIVSERLKKQIRGAKICNEV-----------MGSDHCPVE 247

Query: 300 IDYD 303
           +  D
Sbjct: 248 LTID 251


>gi|237737412|ref|ZP_04567893.1| exodeoxyribonuclease III [Fusobacterium mortiferum ATCC 9817]
 gi|229421274|gb|EEO36321.1| exodeoxyribonuclease III [Fusobacterium mortiferum ATCC 9817]
          Length = 251

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 78/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L    G                    Y K   ADI  LQE          
Sbjct: 1   MKLISWNVNGLRACVGKGF---------------LDYFKEQQADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++      +S           I+V                          R
Sbjct: 45  LELDGYHQYWNYAEKKGYSGTAIFTKEK-PISVHYGIGIEE-------------HDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +     +  +               L        +   
Sbjct: 91  -----VITLEFEKFYMITVYTPNSQEKLARLDYRMKWEEDFKNYLLEL--------DKKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +  +  +  F     ++ +  
Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKTNRKNAGFSDEEREKMTKLLESGFVDSFRYFYPNKTDIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++     + +        +             SDHCP+ 
Sbjct: 198 SWWSYRFSARAKNAGWRIDYFLVSDRIKENMKGAEIHTEIL-----------GSDHCPVL 246

Query: 300 IDYD 303
           ++ D
Sbjct: 247 LNID 250


>gi|237807677|ref|YP_002892117.1| exodeoxyribonuclease III [Tolumonas auensis DSM 9187]
 gi|237499938|gb|ACQ92531.1| exodeoxyribonuclease III [Tolumonas auensis DSM 9187]
          Length = 268

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+   +    DI+ LQE   ++     
Sbjct: 1   MKIISFNINGL----------------RARPHQLQAIVEQHHPDIIGLQETKVHDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S    + +         H  +A+  +          + G  +    +  R
Sbjct: 42  -------FPVSIIEELGYQVHFHGQKAHYGVALLSRKTP----DAVIKGFPEDDEESQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++ NG+ + V +       F       +        +  + L +++ Q      
Sbjct: 91  LIIGRFMQENGRLLTVFN-----GYFPQGESRDHPIKFPAKQKFYRDLLNYLQQNHTPDE 145

Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             VI GD N                        ++L    ++   +     +  +  +  
Sbjct: 146 DIVIMGDMNISSTDLDIGIGEANRKRWLQTGKCSFLPEEREWLNELLAWGFVDTWRSQNP 205

Query: 243 SRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +      + L Q          D      ++ S
Sbjct: 206 DSNEHFSWFDYRSRGFDDNRGLRIDLLLATSVLQQRLQQTGI-------DYEIRGMEKPS 258

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 259 DHAPIWAEF 267


>gi|257783920|ref|YP_003179137.1| exodeoxyribonuclease III Xth [Atopobium parvulum DSM 20469]
 gi|257472427|gb|ACV50546.1| exodeoxyribonuclease III Xth [Atopobium parvulum DSM 20469]
          Length = 259

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 79/309 (25%), Gaps = 76/309 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  Q+ +L+SWN+N L                        +  + ++AD+  LQE     
Sbjct: 2   SQTQEYKLISWNVNGLRAVLKKEPSF-------------TEIFETINADVFALQETKLQE 48

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++                  +   ++   ++  AV  +   +           D   
Sbjct: 49  GQVEL-----------DLPGYVQTWNYADRKGYSGTAVFSRETPLQVIRQIGCPVADDEG 97

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R         +  +  +K W + ++  +     +  +               L       
Sbjct: 98  R---------VCALEFEKFWFVCVYTPNSKDQLARLDERLEWDQHYRDFLAEL------- 141

Query: 199 KESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243
                P +  GDFN   N                     + +  +        F      
Sbjct: 142 -SKQKPVITCGDFNVAHNEIDLKNPSSNRQNAGFSDEERESFTKLLDAGFTDTFRYRHPD 200

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              A      +           IDYF++     + +   S    +Y            SD
Sbjct: 201 ITGAYSWWSYRFNARKNNAGWRIDYFLVSDRIAEQVKSASILSEIY-----------GSD 249

Query: 295 HCPISIDYD 303
           HCPI +  +
Sbjct: 250 HCPIELSIE 258


>gi|289705726|ref|ZP_06502110.1| exodeoxyribonuclease III [Micrococcus luteus SK58]
 gi|289557566|gb|EFD50873.1| exodeoxyribonuclease III [Micrococcus luteus SK58]
          Length = 275

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/313 (9%), Positives = 77/313 (24%), Gaps = 73/313 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                 +    +  + +  D D++ +QE    +     
Sbjct: 1   MKIATWNVNSL----------------RARADRVEAFLERHDIDVLAIQETKCRDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS----YPLLGAKDSFSR 139
                    +       +    +       +A+  +      Q      P  G      +
Sbjct: 41  ------NFPWELFERAGYEVVHNGTSQWNGVAIASRVGLSDVQRGFPGQPHFGKGGVDPQ 94

Query: 140 AGNRRA---VELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWI 195
             +R     V          + +  +++ +     +           +L + A       
Sbjct: 95  EESRAIGATVGAEAADGVAPVRLWSLYVPNGRGLENEHMGYKLEWLRVLQEHAAA----- 149

Query: 196 TQKKESLVPFVIAGDFNRKINY-----------------LGNNDDFWKTIDPNDSLIRFP 238
              ++      +AGD+N                             +   +    +    
Sbjct: 150 RLAEDPDTRLALAGDWNIAPQDEDVWDIELFQREGYTHVSPAERAAFHAFEDAGLVDVVR 209

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                                    + ID+ +      + +            D  + +G
Sbjct: 210 PRHPGP-GVYTYWDYTGLAFPKKKGMRIDFQLCSPALAQTVTDAWI-------DREERKG 261

Query: 290 KRLSDHCPISIDY 302
           K  SDH P+ ++ 
Sbjct: 262 KGASDHAPVVVEL 274


>gi|119945063|ref|YP_942743.1| exodeoxyribonuclease III [Psychromonas ingrahamii 37]
 gi|119863667|gb|ABM03144.1| Exodeoxyribonuclease III [Psychromonas ingrahamii 37]
          Length = 269

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 84/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  +N V   
Sbjct: 1   MKVISFNINGL----------------RARLHQLQAIIDKHQPDVIGLQEIKVHNDV--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  KN  +  Q     G       A  R
Sbjct: 42  -------FPVADVEAMGYHVYFHGQKGHYGVAMLCKNKALDVQ----YGFPTDDEEAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  + +  G  + +L+       F       +        +  Q L  ++ +   +  
Sbjct: 91  MIMVTVQDKAGLPVRILN-----GYFPQGESQNHETKYPAKRKFYQDLNIYLNEYHTAED 145

Query: 204 PFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++L    ++   +     +  F     
Sbjct: 146 QLIVMGDINISRLDLDIGIGEVNAKRWLQTKKCSFLPEEREWLAKLMDFGLIDTFRLLNP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID  +  +      I           D      ++ S
Sbjct: 206 EVSDQYSWFDYRSRGFDDNRGLRIDVILATETLANKTIDTGI-------DYELRAIEKPS 258

Query: 294 DHCPISIDY 302
           DH PI  ++
Sbjct: 259 DHAPIWTEF 267


>gi|91975059|ref|YP_567718.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB5]
 gi|91681515|gb|ABE37817.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB5]
          Length = 274

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 76/301 (25%), Gaps = 70/301 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ ++NIN ++                     L Q+ +    DIV LQE+ +        
Sbjct: 15  KIATFNINNVN----------------KRLPNLLQWLRAAKPDIVCLQELKAEQR----- 53

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                           ++           +A+  +   ++     L G  D         
Sbjct: 54  -----KFPEQALHDAGYNAAWVGQKTWNGVAILARKRSLIVTQTKLPGDADDQQARYIEA 108

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           A+          I V  ++  +       +     S        + L     +   S  P
Sbjct: 109 AI--------GGILVGCVYAPNGNPQPGPKFDDKIS------WMKRLNRHAGKLLASGAP 154

Query: 205 FVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA- 247
            VIAGDFN                       +   + K +    +        D R    
Sbjct: 155 VVIAGDFNVAPTALDIYPTKSWNEDALIQPESRRAYAKLLGQGWTDAVRALHPDQRVYTF 214

Query: 248 NKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               RN+        +D+ ++       L            D      +  SDH P  I 
Sbjct: 215 WTYWRNRFERDDGLRLDHLLVSPELASRLFAAGV-------DRAVRAREGASDHAPAWIV 267

Query: 302 Y 302
            
Sbjct: 268 L 268


>gi|297190600|ref|ZP_06907998.1| sphingomyelinase C [Streptomyces pristinaespiralis ATCC 25486]
 gi|297150553|gb|EDY61820.2| sphingomyelinase C [Streptomyces pristinaespiralis ATCC 25486]
          Length = 333

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 85/298 (28%), Gaps = 31/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R++++N    S+    +  ++                     D+V LQE    ++   
Sbjct: 44  SLRVLTYNAFLFSKSLYPNWGQDHRAAAIPAAP------FFQGNDVVVLQEAFDNSSSDA 97

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134
           +         + T  +                       +AV  K   V ++ Y    A 
Sbjct: 98  LLRGAAAQYPHRTPVMGRSKDGWDATGGAYSSTTPEDGGVAVLSKWPIVRKEQYVYKDAC 157

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            +   + N+  V  ++++NG ++ V+  H +S             +  + S+Q + +  +
Sbjct: 158 GADWWS-NKGFVYAVLDVNGTRVHVVGTHAQS----TDPGCDAGEAAEMRSRQFRAMDAF 212

Query: 195 IT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN----- 248
           +  +   +    V+AGDFN                                   +     
Sbjct: 213 LDGKNIPASEQVVVAGDFNVDSRTSEYASMLADGGLVGADARTGHPYSFDTSENSIAAER 272

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------KRLSDHCPISI 300
                +  +D+ +      K     +      +     S          LSDH P+  
Sbjct: 273 YPDDPREDLDHVLHRAGHAKPSGWTNEVIKERSAPWSVSSWGTTYTYTNLSDHYPVIA 330


>gi|145355640|ref|XP_001422066.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582305|gb|ABP00360.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 304

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 91/309 (29%), Gaps = 32/309 (10%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           A+ A  VR+V++NI     ++         ++ ++ +    +++    LDAD++ LQE+ 
Sbjct: 5   AAAATSVRVVTYNILAQVYAKSAWFPWTPRALMKSKARRANVQKKLLALDADLMALQELD 64

Query: 76  S--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------ 127
               +       K+         R +  +K+ +     + +A R     +          
Sbjct: 65  GYEPSEENDARWKSWLREHGYESRYVQRTKKSNAKKDGSCVAWRASTFALEDSRNLEYND 124

Query: 128 --YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL--DIHLKSFCFLDSLENTYSPSCSL 183
             Y L G  D+        A    +      + +L          F  +          +
Sbjct: 125 IGYDLYGRDDANDETNENEARRRYLRDCVGNLTLLRRIKDGALVVFASTHLYWDPECADV 184

Query: 184 LSQQAQWL--------KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
              QA+ L         + + + +   V  +I GDFN                   ++  
Sbjct: 185 KLAQAKMLIAECVKFRDEALIRAEGRPVHVIIGGDFNSDPQSDVYGAM--------NAAF 236

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                       N        IDY  +       ++            +        SDH
Sbjct: 237 TSVSNGREPQFTNVTPSFTACIDYVFLSSG--VRVVAVDEQPARDTLGEGLPNTGHPSDH 294

Query: 296 CPISIDYDF 304
            P++   +F
Sbjct: 295 LPVAAKIEF 303


>gi|47097522|ref|ZP_00235061.1| exodeoxyribonuclease [Listeria monocytogenes str. 1/2a F6854]
 gi|224503787|ref|ZP_03672094.1| exodeoxyribonuclease III [Listeria monocytogenes FSL R2-561]
 gi|254832537|ref|ZP_05237192.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes 10403S]
 gi|254901191|ref|ZP_05261115.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes J0161]
 gi|254914076|ref|ZP_05264088.1| exodeoxyribonuclease [Listeria monocytogenes J2818]
 gi|254938390|ref|ZP_05270087.1| exodeoxyribonuclease [Listeria monocytogenes F6900]
 gi|47014105|gb|EAL05099.1| exodeoxyribonuclease [Listeria monocytogenes str. 1/2a F6854]
 gi|258611002|gb|EEW23610.1| exodeoxyribonuclease [Listeria monocytogenes F6900]
 gi|293592096|gb|EFG00431.1| exodeoxyribonuclease [Listeria monocytogenes J2818]
          Length = 251

 Score = 90.0 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWN+N L                        +Y + +DADI  LQE          
Sbjct: 1   MRLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +++ ++  +                        + +++    +   
Sbjct: 91  -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|87122729|ref|ZP_01078604.1| extracellular nuclease-related protein [Marinomonas sp. MED121]
 gi|86162026|gb|EAQ63316.1| extracellular nuclease-related protein [Marinomonas sp. MED121]
          Length = 848

 Score = 90.0 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/357 (12%), Positives = 97/357 (27%), Gaps = 73/357 (20%)

Query: 19  SVAQKVRLVSWNINTLSEQE--------GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           S    +R+ S+N+  L            G +             T +      +DADIV 
Sbjct: 461 SADGNLRVASFNVLNLFNSPFGGDANAHGDNRGAEESTEYQLQLTKIANAISMIDADIVG 520

Query: 71  LQEMGSY-----NAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           L E+ +      +A+A +      T          ++       + I   +  R   V +
Sbjct: 521 LMEIENNGFGEASAIAALVDQINTTQAASALPYSYVSAGDDVGTDAIAVGLIYRADVVSL 580

Query: 124 LQQSY-------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
           +  +            A+ +      R ++    +   + +K+ ++  HLKS       +
Sbjct: 581 VDDAVKIDMPEQHGTDAEGTNFDKYMRVSLLQKFQHIESKRKLSIVVNHLKSKGSACIED 640

Query: 175 NTYSPSCS-----LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------- 221
                             A  L D+I    +     ++ GD N                 
Sbjct: 641 TANPEDAQGSCNAFRVSAAVTLGDYIATNVQGD--VLVMGDLNAYGKEDPVRVLTDYDPL 698

Query: 222 ----------DDFWKTIDPNDSL-----------IRFPKEKDSRCNANKNLRNKIPIDYF 260
                            D N                    + ++  +         +D+ 
Sbjct: 699 TAERKIVTAEQATLNGEDLNGGASVEVSQSYGLTNLVEHFQGAKGYSYTYSGELGSLDHA 758

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-------------SDHCPISIDYDF 304
           + + +  K ++      I   E ++     +              SDH P+ I+ D+
Sbjct: 759 LANASLMKSIVATDDWHINSAESNLFEYSSQYTGDLVKSDNAYSSSDHDPVIIEIDY 815


>gi|114762656|ref|ZP_01442090.1| endonuclease/exonuclease/phosphatase family protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114544566|gb|EAU47572.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           sp. HTCC2601]
          Length = 333

 Score = 90.0 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 93/332 (28%), Gaps = 52/332 (15%)

Query: 24  VRLVSWNINTLSEQEGVSL----WKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75
           +RL ++NI         +           R           L      +DAD V + E  
Sbjct: 1   MRLATYNIEWFDALFDDAGQLLNDDGWSARHDITRQQQTEALGIVFTAMDADAVMIIEAP 60

Query: 76  SYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             N+          +   +        +   ++     A+        V         A 
Sbjct: 61  DSNSRRDTDRALKTFAEAFELRTRDVLTGFVNDTQQEIALLYDPSVFTVRHAPGESSDAP 120

Query: 135 DSFSRA--------------GNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYS- 178
                                ++  +E+  V  +GK + ++  HLKS     +       
Sbjct: 121 RFDHVFHIDLDIDATRDKVSFSKPPLEIEAVTASGKVLRLIGAHLKSKAPHGARTRDQIM 180

Query: 179 ----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226
                +      QA WL+  +    E     ++ GD N           F +        
Sbjct: 181 RLAIANRRKQLAQAIWLRRRVEALLEEGESVIVMGDLNDGPGLDEYEHLFGRSSVEIVLG 240

Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAY----KFLIQ 272
                  DP+       K       A   L+ +       +DY ++ ++       + I 
Sbjct: 241 DGGPPLFDPHAERALASKFGAQPTTARFYLKPEKRYMQAMLDYIMVSEDLARTRPSWRIW 300

Query: 273 ESFSE-ILYNEDDIKSRGKRLSDHCPISIDYD 303
             F + + +   +++      SDH P+++D D
Sbjct: 301 HPFDDPVCWRTPELREALLDASDHFPVTLDID 332


>gi|42524876|ref|NP_970256.1| exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100]
 gi|39577087|emb|CAE78316.1| Exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100]
          Length = 285

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 81/320 (25%), Gaps = 74/320 (23%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            L+        +  + V+++SWN+N +                      L  +      D
Sbjct: 15  LLLIDAFDGVETQGETVKIISWNVNGIRACHKKG---------------LLDFVNREKPD 59

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           I  +QE             +            +     +    ++ +A          + 
Sbjct: 60  IFCIQETK--------AHIDQVENELKKLTWNHSYWSSAVKKGYSGVATFVNEEPKSVEY 111

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
              +   +S  R          +  +     + +I+  +    D   N            
Sbjct: 112 GWGISEYESEGRI---------IISDHGPFDLYNIYFPNGGSGDVRHNFKQQ-------F 155

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPND 232
            + L   + +K  +    V+ GD+N     +  +D                 + +     
Sbjct: 156 LKDLNHHLKEKLATGRQVVVVGDYNVAHEAIDVHDPVRLSKVSGFFPEERAWFDSFVDLG 215

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +  F   K S          +           IDY  + +   K+L      + +    
Sbjct: 216 FIDTFRYFKPSEAKRYSWWDYRQMARISNRGWRIDYICVSKGLEKYLASADILDQV---- 271

Query: 284 DIKSRGKRLSDHCPISIDYD 303
                    SDHCP+    D
Sbjct: 272 -------EGSDHCPVVATLD 284


>gi|56751512|ref|YP_172213.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 6301]
 gi|81301416|ref|YP_401624.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 7942]
 gi|56686471|dbj|BAD79693.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 6301]
 gi|81170297|gb|ABB58637.1| Exodeoxyribonuclease III [Synechococcus elongatus PCC 7942]
          Length = 265

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 91/303 (30%), Gaps = 65/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   S    L+++  +   DIV LQE      V + 
Sbjct: 1   MRIATWNVN----------------SVRSRLEHLQRWLTDQTLDIVCLQE---TKVVDEQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +    +    +  +A+  +      Q     GA       G+ 
Sbjct: 42  FPLEPLQAL-------GYHCAIAGQKSYNGVAILSRQPLADVQ--IGFGAVLGAEAVGDL 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              + ++      + ++++++ +   L S +  Y        +    L+ ++T   +   
Sbjct: 93  DEQKRVISGRSGDLRIINLYVPNGSELGSEKYDYK------LRWLTCLQQYLTVLGDRES 146

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              I GDFN  +      D                  +    +   +   +  ++  +  
Sbjct: 147 QIHICGDFNIALEDRDIYDPAGKETHIMSSPTEREALRQSVLSLGFVDAFRLFEAGADQF 206

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+  + ++A    I           D      ++ SDH P+ 
Sbjct: 207 SWWDYRTGAFRRNRGWRIDHHYLSESAKARAIACHI-------DREPRTWEKPSDHTPVV 259

Query: 300 IDY 302
           ++ 
Sbjct: 260 LEL 262


>gi|312891039|ref|ZP_07750563.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM
           18603]
 gi|311296506|gb|EFQ73651.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM
           18603]
          Length = 279

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 77/311 (24%), Gaps = 41/311 (13%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M  K  L    F++     +AQ + + ++N+   +  +  +LW N     T+        
Sbjct: 1   MKIKLHLFTALFVLMALQGMAQHLIVGTFNLRFDNPSDTGNLWVNRAPVATA-------L 53

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            +    DI   QE               +  +             S            K 
Sbjct: 54  IRFHQFDIFGTQEGLKNQLNDISNALPEYQRYGLGRDDGKDGGEHSAIFFKKYRFKLLKK 113

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYS 178
                   P        +   NR    + +  +++ KK +  + H     F    +    
Sbjct: 114 GDFWLSETPDKPGLGWDATCCNRICSWVCLLDKVSKKKFYFFNAH-----FDHQGKIARQ 168

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S  L+ +  + +              +  GD N           +      N  +  F 
Sbjct: 169 ESAKLVLKMIKQIA--------GNEKAIFTGDLNGDHESS----WYQLLASSNYLVDTFA 216

Query: 239 KEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           + K                     ID+                    +        GK  
Sbjct: 217 QAKQPYTFNASFNGFGKELNGNGIIDHIFTTGK---------ADVKRWGILTDSYHGKYP 267

Query: 293 SDHCPISIDYD 303
           SDH P+  + +
Sbjct: 268 SDHFPVLAEVN 278


>gi|304384008|ref|ZP_07366464.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           marshii DSM 16973]
 gi|304334900|gb|EFM01174.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           marshii DSM 16973]
          Length = 348

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/352 (13%), Positives = 100/352 (28%), Gaps = 64/352 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKN-----------S 46
           ++K++L L+     CT + AQK      +  +N   L +       ++           +
Sbjct: 1   MKKHILLLIIVAALCTGATAQKKYAVYAVGFYNQENLFDTCHDEGKRDYEFLPNGSYKWN 60

Query: 47  VKRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             +       + +   ++  DI        + L E+ +   +  +  +       +    
Sbjct: 61  GLKYEHKLRNMARALADMGTDILKNVGCAFIGLSEVENARVLTDLVAQEPLK---NRGMQ 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +      +  A+        V + + +P +   +  S    R  + +   + G+ +
Sbjct: 118 FVHIEGPDRRGVDCALLYNPALFTVQKSTLHPYVQEIEKDSAFYTRGFLTVEGTLAGESV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V+  HL S         + +        Q + LKD +           I GD N     
Sbjct: 178 AVIVCHLPSRFSTSFYRESGAR-------QMRVLKDSL-LMANPSTKVFIMGDMNDDPTD 229

Query: 218 LGNNDDFWK----TIDPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
              ++         +  N       +               +    D  VM  N      
Sbjct: 230 RSMHEVLGAKEEIALTGNGEMYNPWYNLLAKQGIGTLSYQGSWNLFDQIVMTPNLLDRTG 289

Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
           ++ FS + Y ++ I                              SDH P+ +
Sbjct: 290 KKDFSSLTYWKNRICKFNYLLQTEGKYKGSPKRTTAGGVWLDGFSDHLPVVV 341


>gi|239833024|ref|ZP_04681353.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301]
 gi|239825291|gb|EEQ96859.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301]
          Length = 268

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 81/306 (26%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       L+ Q+ ++   D++ LQE         +
Sbjct: 3   FSVATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DNL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                S    +  +A   K      +        D        
Sbjct: 44  FPSKGFRAL------GYEHIAISGQKGYHGVATVSKRPLTGVEKIGFCDMGDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  +VE  GKK+ + + ++ +    D  +   +P  +      + ++  +  +++   
Sbjct: 93  --LSAVVEAGGKKLRIHNFYVPAG--GDEPDPQINPKFAHKLAFLEEMRAIVADRQDGHS 148

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N     N + ++    K +                        +   +    
Sbjct: 149 SVLV-GDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRVKGGWSDLMRQLIPADQKI 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +  +                      R SDH P
Sbjct: 208 FTWWSYRAKDWAESDRGRRLDHVWGSGDLEQ-------HIQGLQILRDARGWDRPSDHVP 260

Query: 298 ISIDYD 303
           +   ++
Sbjct: 261 VIATFN 266


>gi|114707701|ref|ZP_01440596.1| putative exodeoxyribonuclease iii protein [Fulvimarina pelagi
           HTCC2506]
 gi|114536945|gb|EAU40074.1| putative exodeoxyribonuclease iii protein [Fulvimarina pelagi
           HTCC2506]
          Length = 267

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/308 (10%), Positives = 75/308 (24%), Gaps = 72/308 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
              L +WNIN                        + ++ K    D++ LQE    +    
Sbjct: 2   TFSLTTWNIN----------------SVRLRAESVVKFLKMEQPDVLCLQETKCTNEQFP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              F    +                     +  +AV  K               D+    
Sbjct: 46  HAAFEGLGYDHVA-----------LHGQKGYHGVAVLSKLPFEDVVRQDFCEVGDARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                + + +++  + I V ++++ +    D  +   +P      Q  + ++  +  + E
Sbjct: 93  -----LSVKLKVADRAIRVHNLYVPAG--GDEPDAEVNPKFGHKLQFIEEMRK-MRAEGE 144

Query: 201 SLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244
           + V  ++ GD N                               +          +     
Sbjct: 145 AGVSALLCGDLNIAPYESDVWSHKQMLKIVSHTPVETSGLLTAMSEGGWTDLMRRHVPME 204

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+     +    L   +               +R SD
Sbjct: 205 EKLFTWWSYRAKDWAASNRGRRLDHVWGSADLAARLSDVNV-------LTDARGWERPSD 257

Query: 295 HCPISIDY 302
           H P++  +
Sbjct: 258 HVPVTASF 265


>gi|21673785|ref|NP_661850.1| hypothetical protein CT0957 [Chlorobium tepidum TLS]
 gi|21646913|gb|AAM72192.1| hypothetical protein CT0957 [Chlorobium tepidum TLS]
          Length = 344

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 82/322 (25%), Gaps = 53/322 (16%)

Query: 20  VAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTTSDY----TLLRQYAKNLD--- 65
             Q++ ++ WN+  L +        +           T          + Q    +    
Sbjct: 29  QPQQILVMWWNVENLFDTKNDPKVDDQEFTPMGKAHWTEKKLLLKRLRIAQVFNAIRAER 88

Query: 66  -----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 DIV   E  +    A          +      I++ +      I   +A     
Sbjct: 89  EYGKYPDIVAFAETENRQVFAGTLAALDRATYA-----IDYHESPDPRGIDIGLAWN--- 140

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              ++ +          +R G R  +            ++  H  S  F      T   +
Sbjct: 141 PATVKFTGSKPYKVRLNNRRGTRFVIAAGFTAASNHFTIVLNHWPSRSFDTQWSETNRIA 200

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK- 239
            + +   A+ + D +          ++ GDFN +       D    + D         + 
Sbjct: 201 AARV---ARHIVDSLRTCNPQSE-IIVMGDFNDQPENHSVKDVLGSSFDRKAVRHASSRL 256

Query: 240 -----EKDSRCNANKNLRNKIPIDYFVMDQNAYKF----LIQESFSEIL----------- 279
                 + S   +     +   ID  ++           + + SF               
Sbjct: 257 LYNCWNEASSPGSYFYRNHWEQIDQMLVSAALLDEKGLSIDKTSFRVFSIPAMFDRFGKG 316

Query: 280 -YNEDDIKSRGKRLSDHCPISI 300
            Y+           SDH P+ +
Sbjct: 317 LYSTYKQGKFKGGYSDHLPLLL 338


>gi|291515515|emb|CBK64725.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 290

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 97/326 (29%), Gaps = 70/326 (21%)

Query: 1   MIRKYVLALVFFLVPCTASVA---QKV--------------------RLVSWNINTLSEQ 37
           +++KY++ L+   + C A+     +                      RLV++N+   ++ 
Sbjct: 4   LMKKYLMTLLMLGLACNAAACMEDEPFYDTEIPPHVSIDNSKGEGVTRLVTYNVGIFNKY 63

Query: 38  EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
                          DY L+    K +DAD + + E+ +     +   +           
Sbjct: 64  ------------IKDDYQLIADMMKEIDADAICMNELDNNTNRTRHVYQLKHFASLMGSW 111

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
              +      +       V  +   V + S  L         A  R  V + +E      
Sbjct: 112 DFEYGAAMPYDGGEYGEGVTTRKKAVNKFSVALPKGVG----AEPRVLVVMEME----DY 163

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKIN 216
            +   HL               S      Q + +   + ++  +S  P  + GD N   +
Sbjct: 164 VICTSHLDH------------VSSEAQLGQVELITKTMKERYGDSGKPVFLGGDMNATPS 211

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                 +  K +  +  ++              +      IDY +  +   K  +  S  
Sbjct: 212 S-----ETGKLLQKDWEILTIT-----GFGTFPSDNPSKCIDYIMQLKGTPKCEVVGSQI 261

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
              +   D+     + SDH P+ +D 
Sbjct: 262 LRWFKSGDVT----KASDHLPVMLDI 283


>gi|332520200|ref|ZP_08396664.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4]
 gi|332044759|gb|EGI80953.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4]
          Length = 321

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 79/317 (24%), Gaps = 51/317 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVK-----------RTTSDYTLLRQYAKNL-------DAD 67
           +  +NI  L +     L ++S             R  +    +     N+          
Sbjct: 15  IAFYNIENLFDVYDDELTRDSDMTPNSEKKWSIKRYNNKLRKIGYVISNIGKKDVNRHPA 74

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           IV L E+ +   +  +        +       +         I  A+   +   +V    
Sbjct: 75  IVGLAEIENEAVLKDLVNSKHLKAYNYDFVHYDSPDE---RGIDVALLYDESVFKVAYSK 131

Query: 128 YPLLGAKDSFSRAG-NRRAVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLS 185
              L   D        R  + +     G ++ VL  H  S    D   E     +   ++
Sbjct: 132 SYTLDLVDDLGVVDLTRDILLVSGLFEGLELHVLVNHWPSRRSGDVETEYKRMKASQKVT 191

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +    LK+     K S    ++ GDFN   +              +              
Sbjct: 192 EIITELKE-----KNSEAKIIVMGDFNDDPSSKSIKSLEL----SHGLFNPMRTLLSRDR 242

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDDIK 286
               + +     D  ++  N ++                         +    Y     K
Sbjct: 243 GTTSHNQRWNLFDQVLITHNFFERKKNALRFVNANIFDEDFLKERDSKYKGSPYRTYVGK 302

Query: 287 SRGKRLSDHCPISIDYD 303
                 SDH P+ +   
Sbjct: 303 RYKGGYSDHFPVYLILS 319


>gi|313159654|gb|EFR59012.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 250

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 85/308 (27%), Gaps = 62/308 (20%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           M + + +AL         +        V+ +S+NI      + V            D   
Sbjct: 1   MKQYFSVALAVLFCALMPAACTTQTTAVKFMSYNIRNGRGADDV-----------QDLGR 49

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           + +    +  D+V LQE+ S                 +        +    +     I +
Sbjct: 50  IAEVIGRVAPDVVALQEVDSVTGRMNGRFIPEELGRMTGM-HARFCRAIDYDGGGYGIGL 108

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +   +  +  PL G      R   R  +       G  + V  + L            
Sbjct: 109 LSRAEPLSVRRIPLPG------REEARVLLMAEF--PGYVVCVTHLSLSP---------E 151

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
              +   + +QA               P ++AGDFN         DD  + +       R
Sbjct: 152 DQRASLPIIRQATD---------TCRKPVLLAGDFNM--------DDAEEVLGGLGGEFR 194

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              +       +   R  I IDY +         + +S        D         SDHC
Sbjct: 195 PLSDTAQLTFPS--DRPSIRIDYIL------GRGLPQSAKIAERTVD----YTTVASDHC 242

Query: 297 PISIDYDF 304
           P+ +   +
Sbjct: 243 PLWVSLVW 250


>gi|239916752|ref|YP_002956310.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
 gi|281414790|ref|ZP_06246532.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
 gi|239837959|gb|ACS29756.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
          Length = 275

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/313 (9%), Positives = 76/313 (24%), Gaps = 73/313 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                 +    +  + +  D D++ +QE    +     
Sbjct: 1   MKIATWNVNSL----------------RARADRVEAFLERHDIDVLAIQETKCRDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS----YPLLGAKDSFSR 139
                    +       +    +       +A+  +      Q      P  G      +
Sbjct: 41  ------NFPWELFERAGYEVVHNGTSQWNGVAIASRVGLSDVQRGFPGQPHFGKGGVDPQ 94

Query: 140 AGNRRA---VELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWI 195
             +R     V          + +  +++ +     D           +L + A       
Sbjct: 95  EESRAIGATVGAEAADGVAPVRLWSLYVPNGRGLEDEHMGYKLEWLRVLQEHAAAHLA-- 152

Query: 196 TQKKESLVPFVIAGDFNRKINY-----------------LGNNDDFWKTIDPNDSLIRFP 238
              ++      +AGD+N                             +   +    +    
Sbjct: 153 ---EDPDTRLALAGDWNIAPQDEDVWDIELFQREGYTHVSPAERAAFHAFEDAGLVDVVR 209

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                                    + ID+ +      + +               + +G
Sbjct: 210 PRHPGP-GVYTYWDYTGLAFPKKKGMRIDFQLCSPALARTVTDAWIE-------REERKG 261

Query: 290 KRLSDHCPISIDY 302
           K  SDH P+ ++ 
Sbjct: 262 KGASDHAPVVVEL 274


>gi|255262040|ref|ZP_05341382.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62]
 gi|255104375|gb|EET47049.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62]
          Length = 259

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 82/304 (26%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ ++NIN                   +    L  +      D+  LQE+     N   
Sbjct: 1   MKIATFNING----------------IKARINALPDWLDEAQPDVAILQEIKSVDENFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F +  + +                      +A+  K      Q       +D  +R  
Sbjct: 45  ELFEERGYNV------------ESHGQKSFNGVAMLSKLPLEDVQRGLPGDDEDEQARW- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E  V +  + + +  ++L +   +   +  Y  S        + L          
Sbjct: 92  ----IEATV-VGEQAVRLCGLYLPNGNPVPGPKYEYKLS------WMERLLTRAKDLLAE 140

Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               +I GDFN                   +   +   W+ I        F        +
Sbjct: 141 EQLALITGDFNIIPQAEDAANPQVWREDALFRPESRAAWRRIVNLGYTEAFRARTHGPGH 200

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +                ID+F++       L +          D      ++ SDH P+
Sbjct: 201 YSFWDYQAGAWNKNDGIRIDHFLLTPQCADLLREC-------KIDAEIRGREKPSDHVPV 253

Query: 299 SIDY 302
            ++ 
Sbjct: 254 WVEL 257


>gi|301105190|ref|XP_002901679.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262100683|gb|EEY58735.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 312

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 89/301 (29%), Gaps = 25/301 (8%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN---LDADIVFLQ 72
              +QK+ ++++N+              ++S  R  +    L     +   +  D++ LQ
Sbjct: 15  TETSQKLLVMTYNVLAQCYVRSTFFPYCESSELRWKNRSKKLEAVFASSLPVSPDVICLQ 74

Query: 73  EMGS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           E+ +     A +  K  +   +  +            +      ++ K    +    P  
Sbjct: 75  EVDNYKEFWAGMMKKLGYEGIFIKKTSTKPDGVAVFWNEK---MLKMKESVQVSLDLPNG 131

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                 S  G+  A+ +  +    ++  +      F      +     S  +     + +
Sbjct: 132 DESGEASTRGSVGAI-VHFKHLATQLEFVVATTHLFWDPMQEDVKLLQSRRM----LRAI 186

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDPNDSLIRFPKEKD 242
            ++ +  + S  P V +GDFN   +                + +     +        + 
Sbjct: 187 DEFASALEAST-PVVFSGDFNSLPDSKVYSFITSRNHFKSAYAQYDADGEPKFTNVNGES 245

Query: 243 SRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +     R    +DY            + E  S    +++         SDH P+  +
Sbjct: 246 ITDDGTMVPRFVGTLDYIFYRSPRMRPAALMELMSLEDASKEVALPSTISPSDHLPLLCE 305

Query: 302 Y 302
           +
Sbjct: 306 F 306


>gi|327278210|ref|XP_003223855.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
           [Anolis carolinensis]
          Length = 306

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 79/311 (25%), Gaps = 73/311 (23%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +  +      +++ SWN+      +G+  W               ++    + DI+ LQE
Sbjct: 41  LTSSNGKKYTLKVTSWNV------DGIRAWVKKKG---------VEWVSEENPDILCLQE 85

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                   K  P +   +         +     + + ++ +A+  K   +  +     G 
Sbjct: 86  ---TKCAEKQLPADIRDLAEYPH---KYWACSEDKEGYSGVALLSKVKPLEVK----YGI 135

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            +       R     ++       +++  ++ +                      + L  
Sbjct: 136 GEEEHDKEGR-----VITAEFPSYFLVTSYVPNAGRGLVRLEYRQSWDVAFRSYLKGLAA 190

Query: 194 WITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFP 238
                     P ++ GD N                           +  +     +  F 
Sbjct: 191 R--------KPLILCGDLNVAHEEIDLKNPKGNKKNAGFTPEERAGFTKLLEEGFVDTFR 242

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                   A                  +DYFV+ ++  + +                   
Sbjct: 243 HLYPDTAYAYTFWTYMMNARSKNVGWRLDYFVVSKDLQESICDSKIRSTAL--------- 293

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 294 --GSDHCPITL 302


>gi|327278208|ref|XP_003223854.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
           [Anolis carolinensis]
          Length = 314

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 79/311 (25%), Gaps = 73/311 (23%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +  +      +++ SWN+      +G+  W               ++    + DI+ LQE
Sbjct: 49  LTSSNGKKYTLKVTSWNV------DGIRAWVKKKG---------VEWVSEENPDILCLQE 93

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                   K  P +   +         +     + + ++ +A+  K   +  +     G 
Sbjct: 94  ---TKCAEKQLPADIRDLAEYPH---KYWACSEDKEGYSGVALLSKVKPLEVK----YGI 143

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            +       R     ++       +++  ++ +                      + L  
Sbjct: 144 GEEEHDKEGR-----VITAEFPSYFLVTSYVPNAGRGLVRLEYRQSWDVAFRSYLKGLAA 198

Query: 194 WITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFP 238
                     P ++ GD N                           +  +     +  F 
Sbjct: 199 R--------KPLILCGDLNVAHEEIDLKNPKGNKKNAGFTPEERAGFTKLLEEGFVDTFR 250

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                   A                  +DYFV+ ++  + +                   
Sbjct: 251 HLYPDTAYAYTFWTYMMNARSKNVGWRLDYFVVSKDLQESICDSKIRSTAL--------- 301

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 302 --GSDHCPITL 310


>gi|148273865|ref|YP_001223426.1| putative hydrolase [Clavibacter michiganensis subsp. michiganensis
           NCPPB 382]
 gi|147831795|emb|CAN02765.1| conserved hypothetical protein, putative hydrolase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 281

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 74/281 (26%), Gaps = 29/281 (10%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              A ++ ++++NI  L           S  R      L+ +  +     ++  QE    
Sbjct: 18  PVDAPELHVMTYNIRRLFR----RYRPGSPDRWADREPLIAELLQREQPALLGTQEAMPT 73

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              A               R  +           T         +V     P +    S+
Sbjct: 74  QGRALSHALGRHYRRIGHGRNADGHGEGCPTFYDTRRLELTSWRQVALSDTPAVAGSRSW 133

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R AV          + +  ++     F      +   S  ++      ++     
Sbjct: 134 GNMVPRIAVVADFTDRATGLPLRHVNTH---FDHLSRRSREESARMILGIVAEVQ----- 185

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254
                VP ++AGD N  ++   +        +       R     +    +N     +  
Sbjct: 186 -----VPTIVAGDTNAGVDTEPHRLLLEHGALVDAWPAARERLTPEWGTWSNYKAPKRTT 240

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             ID+ ++  +                 +  +  G+  SDH
Sbjct: 241 RRIDWMLVTPD---------IEVERVGINTTRIGGRAPSDH 272


>gi|194336282|ref|YP_002018076.1| Endonuclease/exonuclease/phosphatase [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308759|gb|ACF43459.1| Endonuclease/exonuclease/phosphatase [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 342

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/349 (10%), Positives = 88/349 (25%), Gaps = 63/349 (18%)

Query: 2   IRKYVLALVFFLVPCT---------ASVAQKVRLVSWNINTLSE-------QEGVSLWKN 45
           +RK +  +  F    +             + V  + WN+  L +        +     + 
Sbjct: 1   MRKILCYVFLFFCAVSWISQPAAGNPKAGKSVLFLWWNVENLFDTRNDPITNDDDFTPEG 60

Query: 46  SVKRTTSDY----TLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFY 93
            +  T          +R     +          D++   E+ +     K         + 
Sbjct: 61  KLHWTEKKLILKQMRIRHLLSAVKAHPDYNAYPDLLAFAEVENREVFEKTLSGIPDIGYK 120

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           +      +        I   +A   + V+        + + +       R+ +       
Sbjct: 121 TI-----YHNSSDPRGIDIGLAFNPQTVQAKASKAYSVASAE----RATRKIIVAEFLSE 171

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
           G    ++  H  S  F          + + +++    L   +    +     +I GDFN 
Sbjct: 172 GHPFHLILNHWPSRSFDTHWTEPKRVAAASVARHI--LDSLL--LSKPKADVIIMGDFND 227

Query: 214 KINYLGNNDDFWKTIDPNDS------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
           +       +    T D           +           +         ID  ++    +
Sbjct: 228 EPGNRSLREGLGSTFDAARLKTNGKKFLYNCWSGYEGIGSYSYKNRWQQIDQILLSAGMF 287

Query: 268 KFL----------------IQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             L                + ++     Y   + +      SDH P+ +
Sbjct: 288 DELGLYAPQNAFRCFSFFRLLDATGNKPYATFEKRKYTGGYSDHLPLLL 336


>gi|95928596|ref|ZP_01311343.1| Endonuclease/exonuclease/phosphatase [Desulfuromonas acetoxidans
           DSM 684]
 gi|95135386|gb|EAT17038.1| Endonuclease/exonuclease/phosphatase [Desulfuromonas acetoxidans
           DSM 684]
          Length = 230

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 80/285 (28%), Gaps = 65/285 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSY 77
            +RL +WNI+     +G             D + + +  + L AD++ LQE+        
Sbjct: 5   SLRLATWNIHMAVGSDG-----------QRDLSRIIKVIRQLRADVIGLQEVDNQIDNDQ 53

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           + + ++  +    I        +              A+         + Y L     SF
Sbjct: 54  DDLHRLATQTGQQIIAGPTMKRSRG--------DYGNALLTSLPVNNVERYDL-----SF 100

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  + + +E     + V   HL                      Q + L   +  
Sbjct: 101 KNREPRGLLIVELEWQHSPLHVAVTHLGLRP-------------RERRDQVRRLCTHL-- 145

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
             +   P V+ GDFN    +        +   P                 ++       +
Sbjct: 146 TAKERTPLVLMGDFNEWFIWGRPLRRLKQHFGP---------IHSPATFPSRWPLL--QL 194

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+ + +              ++  +    +  +  SDH P+  + 
Sbjct: 195 DHILTEPQ----------KCLVKKDVYRHTSVRYASDHLPLVAEI 229


>gi|296445860|ref|ZP_06887812.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b]
 gi|296256688|gb|EFH03763.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b]
          Length = 266

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                       L+  + K    D++ LQE    NA    
Sbjct: 1   MKITTWNIN----------------SVRLRIPLVVDFLKQHAPDVLCLQETKCRNA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   +     +       +    +  +A+  K+   L          D+       
Sbjct: 41  -----EFPYADFRAIGYEHFAINGQKGYHGVAIVSKHPLELLDIRDFCETGDARH----- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V + +   G  I + + ++ +    D  + T +P  +        +K+W+T+++ +  
Sbjct: 91  --VSVGLPNGGTPITIHNFYVPAG--GDEPDVTINPKFAHKLGFLDEMKEWVTRERITDG 146

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+ GD N                   +            D    +    +    +   
Sbjct: 147 RVVLVGDLNIAPLEQDVWSHKALLQTVSHTPVEVQKLGAVFDAGRWIDAMRRFVPEQEKL 206

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+    Q         S   +  N        +R SDH P
Sbjct: 207 YTWWSYRASDWTKSDRGRRLDHVWTSQAL-------STELLEMNVLREARSWQRPSDHVP 259

Query: 298 ISIDY 302
           +++  
Sbjct: 260 VTVAL 264


>gi|170692673|ref|ZP_02883835.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
 gi|170142329|gb|EDT10495.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
          Length = 268

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 83/304 (27%), Gaps = 70/304 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ ++NIN                   S  T L Q+ +    DIV LQE+    A   
Sbjct: 3   TLRIATFNING----------------IRSRQTALLQWLEREAPDIVCLQEL---KAADS 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP +         R   +            +A+  K    L+    L G +        
Sbjct: 44  AFPAD-------AVRDAGYHAIWHGQSAWNGVAILSKGEAPLESRRGLPGFEADTHSRYL 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             AV          + V  ++L +       +  Y        +    L D      +S 
Sbjct: 97  EVAV--------DGLLVCCLYLPNGNPQPGPKFEYK------LKWFDHLIDHAANLLKSG 142

Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246
            P V+AGDFN         +                 + + +    +        D R  
Sbjct: 143 HPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYRRLLAQGWTDSLRTHFGDERVY 202

Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              +   +         ID+ ++  +    L            D         SDH P  
Sbjct: 203 TFWDYFRRHWDTNSGLRIDHILLSPDLAPRLRDAGV-------DRWVRGEPHASDHAPTW 255

Query: 300 IDYD 303
           ++ D
Sbjct: 256 VELD 259


>gi|170782964|ref|YP_001711298.1| hypothetical protein CMS_2654 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157534|emb|CAQ02728.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 281

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 73/281 (25%), Gaps = 29/281 (10%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              A ++ ++++NI  L           S  R      L+ +  +     ++  QE    
Sbjct: 18  PVDAPELHVMTYNIRRLFR----RYRPGSPDRWADREPLIAELLQREQPALLGTQEAMPT 73

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              A               R  +           T         +V     P +    ++
Sbjct: 74  QGRALSHALGRHYRRIGHGRNADGHGEGCPTFYDTRRLELTTWRQVALSDTPAVAGSRTW 133

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R AV          + +  ++     F      +   S  ++      ++     
Sbjct: 134 GNMVPRIAVVADFTDRATGLPLRHVNTH---FDHLSRRSREESARMILGIVAEVEA---- 186

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254
                 P ++AGD N  IN   +        +       R     +    +N     +  
Sbjct: 187 ------PTIVAGDTNAGINTEPHRLLIGSGALVDAWPAARERLTPEWGTWSNYKAPKRTT 240

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             ID+ ++  +                 +  +  G+  SDH
Sbjct: 241 RRIDWMLVTPD---------VEVERVGINTTRIDGRAPSDH 272


>gi|260557567|ref|ZP_05829782.1| nuclease [Acinetobacter baumannii ATCC 19606]
 gi|260409193|gb|EEX02496.1| nuclease [Acinetobacter baumannii ATCC 19606]
          Length = 812

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 97/325 (29%), Gaps = 50/325 (15%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K++DAD+  L E+ + 
Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEIANN 520

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +         + +      R  N+ I  AI    K V+ L ++  L     
Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKPLNKAVVLDLGD- 579

Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLLS 185
                 NR  +    +     K   V+  HLKS        N+                 
Sbjct: 580 -----KNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCSGVDANSSDADQNDGQGCWNPTRV 634

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  W+ +          ++ GD N            ++  +    L      + +
Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 692

Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
           +  +                 +D+ + D + Y  +++     I  +E  +          
Sbjct: 693 QAYSYVFGVASDANGNGGAGNLDHAIADADLYPKVVRTFAWHINADEPTVLDYNEEYKTD 752

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +D D
Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777


>gi|229089031|ref|ZP_04220388.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
 gi|228694283|gb|EEL47902.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
          Length = 353

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 109/322 (33%), Gaps = 64/322 (19%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            ++ +  ++NI               G     +S ++T  +   +  + +  D+D + +Q
Sbjct: 53  GEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNIGNMVSFLQKEDSDFILVQ 112

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-------------KK 119
           EM   +   + F  N +  F    +    +   + N     + ++              K
Sbjct: 113 EMDEKSL--RSFDVNEYKAFQDGLKGFASTFGYNFNAQWVPVPIKKPHGYTKSGLGSFSK 170

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176
                   Y L G +    +     R  VE  + + NGK + ++++HL ++    S    
Sbjct: 171 YKVEEVTRYQLPGREMWLRQLFELDRAIVEHKIPVDNGKYLRMVNVHLSAYDKGGS---- 226

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                 +  QQ ++LK+++ +  ++    V+ GD+N+ ++ +   D  +K   P   +  
Sbjct: 227 ------IRKQQVEFLKEYMNKHYKNGDYIVLGGDWNQLLSDVQLQDPKFKEEWPEWLVQL 280

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 281 PEDFTDGGFQWAVDDSVWTVRDNVKSYVEGENFVTIIDGFLVSPN--VEIVSVQGHDLKF 338

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S   
Sbjct: 339 EN----------SDHNPVSTVL 350


>gi|170050812|ref|XP_001861479.1| nocturnin [Culex quinquefasciatus]
 gi|167872281|gb|EDS35664.1| nocturnin [Culex quinquefasciatus]
          Length = 454

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 96/355 (27%), Gaps = 67/355 (18%)

Query: 6   VLALVFFLVPCTASVAQK--VRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQY 60
           +L L      C+        +R+  WN+   TL    +G                 L Q 
Sbjct: 106 MLKLDAISKNCSEPTTNPAQLRIFQWNMLSQTLGMHNDGFVRCPVDALTWDCRRYQLIQE 165

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKK 119
               D DIV LQE+  +  + K+     +   +  +         D+N     A+  +K 
Sbjct: 166 IVQNDPDIVCLQEVDHFKFLQKILATQNYEGVFFPKPDSPCLYINDNNGPDGCAVFYKKD 225

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            + +L     +L      S      A+    + N +++ V   HLK+           + 
Sbjct: 226 RLELLNHFTRVLEVWRVQSNQVAIAALFRTRDTN-QELCVTTTHLKA--------RKGAL 276

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------------- 220
              L ++Q + L  ++        P ++ GDFN +                         
Sbjct: 277 LSKLRNEQGKDLLGFVDAVA-EKRPVILCGDFNAEPIEPIYSTVLNYKPLGLTSAYSDLL 335

Query: 221 ----------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                                       +DD   +I                      +R
Sbjct: 336 AEEGDPSLMIKDLKSLQPQSSISSAHSVDDDCASSISAGGRTKAEQSASCEPSYTTWKIR 395

Query: 253 N----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   IDY    ++         F        D     +  SDH  +  D++
Sbjct: 396 EEGEVCHTIDYVFYSKDQITVKNCLMFPTGEEISPDRTPSYQYPSDHFSLVCDFE 450


>gi|315122848|ref|YP_004063337.1| exodeoxyribonuclease III protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496250|gb|ADR52849.1| exodeoxyribonuclease III protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 265

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 87/303 (28%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V + +WN+N                        +  + +  + DIV LQE  + +     
Sbjct: 4   VTIATWNVN----------------SIRVRIKNVITWIQENNPDIVCLQETKTED----- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   + +N+         +  +A+  K   +           D  +R    
Sbjct: 43  -----KTFPFEAIQSLNYHIETCGQKSYNGVAILSKYQPIEMIKKLPGDDLDEQARF--- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E    IN + + + +I+L +   + S +  Y  S        +    + +Q+ E   
Sbjct: 95  --IEATFTINSQILRIGNIYLPNGNPIASTKYDYKIS------WIKRFLQFASQRLELEE 146

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
             + AGD+N        +D      D               N       +  +   +   
Sbjct: 147 ALIFAGDYNIVPQPRDCHDSIMLQNDACFTLEVRQAFQKLQNMGFTDAIRATNDAHHIYS 206

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + ID+ ++   A  FL            D       + SDH P+ +
Sbjct: 207 FWDYFSDSWRKNKGMRIDHVMLSPEATTFLHSAYI-------DKKPRGCVKPSDHTPVIV 259

Query: 301 DYD 303
             D
Sbjct: 260 ALD 262


>gi|269218782|ref|ZP_06162636.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269211893|gb|EEZ78233.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 265

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 80/306 (26%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ + N+N +                 +    + ++  +  AD++ LQE+ +   +   
Sbjct: 1   MRIATCNVNGIRA---------------AARKGMGEWIASAKADVLLLQEVRAPEELVAP 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +        +   +          A+AVR+                    +    
Sbjct: 46  LVGEGYKTIPWPCEIKGRAG--------VAVAVREGIETGAVVR------GVGDDQPPVD 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L VE+    + V+  +L S         +              ++  + +  E   
Sbjct: 92  TGRWLEVELPELGLRVVSAYLHSGDS------SSKEKMDAKYAHLDLVEKRLAELSEGGG 145

Query: 204 PFVIAGDFNRKINYLGNNDD-----------------FWKTIDPNDSLIRFPKEKDSRCN 246
            F++AGDFN     L   +                    +            +       
Sbjct: 146 RFLVAGDFNIVHTPLDITNWKSNHNRTSGVLDEEIAYLDRWFGQMGLADVQRRLDPDSQG 205

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY +   +  +           Y  D   S   R SDH P
Sbjct: 206 PYTWWSQRGKAFDNNTGWRIDYHLASPSLAEKADA-------YRIDRAPSYDARFSDHAP 258

Query: 298 ISIDYD 303
           + +DY 
Sbjct: 259 LIVDYT 264


>gi|260430974|ref|ZP_05784945.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260414802|gb|EEX08061.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 337

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/337 (13%), Positives = 94/337 (27%), Gaps = 58/337 (17%)

Query: 24  VRLVSWNINTLSE----QEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75
           +RL ++NI   +      + + +  +   R           +      +DAD + + E  
Sbjct: 1   MRLATYNIEWFANLFDRDDKLIVDDSWSGRRNVTKAQQVEAIATVLTAIDADAILIVEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-AK 134
           +                    R  N       N+ H  +AV     R+  +  P+     
Sbjct: 61  NTGKSQNTVRALQEFAETFELRTTNAIMGF-ANETHQELAVLYDPARLRVRHDPIGDRET 119

Query: 135 DSFSRAGNRRAVELLVEIN-----------------------GKKIWVLDIHLKSFCFLD 171
           D F+    R   E  ++++                       G +  ++  HLKS     
Sbjct: 120 DGFAGDAPRFDGEFRIDLDIDATEDIVRFSKPPLELAAESSDGFQFRMIGAHLKSKAPHG 179

Query: 172 SLENT-----YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           +            +      QA WL   +    ++  P V+ GD N         + F +
Sbjct: 180 AESRDALIRISIANRRKQLAQAVWLSHRVKAHLDAGEPVVLLGDLNDGPGLDEFENLFGR 239

Query: 227 ----TIDPNDSLIRFPKEK--DSRCNANKNLRNKIP---------IDYFVMDQNAYKFLI 271
                +           +             R   P         +DY ++  +      
Sbjct: 240 SSVEILLQTGLYDPHAAQACRRRPGWIPSTARFPRPEEGQYLEALLDYIMISPDLRARRP 299

Query: 272 QESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303
                        ++  +++      SDH P+++D D
Sbjct: 300 AWRIWHPFRDEHCWSVPELRDALVTASDHFPVTLDID 336


>gi|209520714|ref|ZP_03269463.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160]
 gi|209498839|gb|EDZ98945.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160]
          Length = 258

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/302 (9%), Positives = 83/302 (27%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      +  +  +   D++ LQE          
Sbjct: 1   MKIATWNVNSL----------------KVRQQHVIDWLASSGTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    I +    +    +  + +  +    + +S  +      F     R
Sbjct: 35  LKLPDEKFPRAELEAIGYRSWYAGQKTYNGVGILVREGLNVDESSIVRNIP-GFEDQQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + + ++  +  +     + +  Y        +    L DW++ +     
Sbjct: 94  VIAATV-----EGVRIISAYFPNGQAPGTDKFAYK------LRWLDALHDWLSTETTLHP 142

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
              + GD+N        +D      + +   +            L+   ++ +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAFVRLIALGLLDAFRQFEQPEKIYS 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++ +                + D +  +  + SDH P+  
Sbjct: 203 WWDYRMMAFRRNAGLRIDHILLSKALSDICTAC-------DVDKVPRKWDQPSDHAPVFA 255

Query: 301 DY 302
             
Sbjct: 256 QL 257


>gi|297195088|ref|ZP_06912486.1| large secreted protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721523|gb|EDY65431.1| large secreted protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 615

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/334 (10%), Positives = 83/334 (24%), Gaps = 69/334 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72
                   ++ + ++N+  L   +               +  L +         DI+ L+
Sbjct: 303 STRPQRNGELAVATYNVENLDPSDP-----------QEKFDALAKAVVENLASPDILALE 351

Query: 73  EMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           E+                         V        + S + + N        +I     
Sbjct: 352 EIQDDTGAKNDGTVSAAQTVKKFTDAIVAAGGPAYEWRSVDPVNNEDGGQPGGNIRQVFL 411

Query: 116 VRKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEING 154
              + V    ++                      P      + +   +R+ +       G
Sbjct: 412 FNPERVSFNDRAGGDATTATGVVRERGRAALTLSPGRIDPANDAWEDSRKPLAGEFTFRG 471

Query: 155 KKIWVLDIHLKSFCFLDS----LENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208
           + ++V+  H  S    +S     +     S +   +QAQ +  ++      +     V+ 
Sbjct: 472 RTVFVIANHFGSKGGDESLVSHHQPPVRSSEAQRLKQAQAVNAFVKDVLDADHKADVVVL 531

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GD N                D             S   +     N   +D  +   +   
Sbjct: 532 GDINDFEFSETTK----ALTDGGALFPAIKSLPRSERYSYVYQGNSQVLDQILTSPSIRD 587

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           F          +++ +        SDH P  + +
Sbjct: 588 FSYDSVHINAEFSDQN--------SDHDPQVLRF 613


>gi|220923190|ref|YP_002498492.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060]
 gi|219947797|gb|ACL58189.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060]
          Length = 263

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 91/304 (29%), Gaps = 67/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  + K    D+V LQE+     V + 
Sbjct: 1   MRITTWNVN----------------SVKQRLGHLLAFLKEASPDVVCLQEL---KCVDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+       +      +            +A+  +    L+     L       +A   
Sbjct: 42  FPR-------TEIEEAGYVVATHGQKAFNGVALLTRQPLPLRDVRRGLPGDPEDGQARY- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E ++      + V  I+L +   + + +  Y  +          L       +E   
Sbjct: 94  --IEAVIPTATATLRVASIYLPNGNPIGTPKYDYKLAFLRR------LLLHARALREKEE 145

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+AGD+N                   +L  +   ++ +  N+      +  D R    
Sbjct: 146 VLVLAGDYNVIPEPIDVANPEAWTGDALFLPESRAAFRML-LNEGFTDALRACDERPGLY 204

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A   L+  S  +             + SDH P++
Sbjct: 205 TFWDYQAGAWSRNLGIRIDHLLLSPQALDRLVSASVQKH-------LRGLDKPSDHVPVT 257

Query: 300 IDYD 303
           ++ D
Sbjct: 258 VELD 261


>gi|114707796|ref|ZP_01440690.1| hypothetical protein FP2506_17604 [Fulvimarina pelagi HTCC2506]
 gi|114536785|gb|EAU39915.1| hypothetical protein FP2506_17604 [Fulvimarina pelagi HTCC2506]
          Length = 244

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 86/280 (30%), Gaps = 42/280 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R V++NI++    +              D   +     +L AD+V LQE+    A +  
Sbjct: 1   MRFVTYNIHSCLGTDR-----------RRDPDRIGAVISDLRADVVALQEVDVGRARSGF 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  I   T                  IA   ++   L ++  L G + ++     R
Sbjct: 50  VD-QAQRIAEKTGLHHYFFAPVEECGERYGIAFLTRSAATLMKAALLPGLQ-TYPNLEPR 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+ + +E     + V++ HL                      QA  L        +   
Sbjct: 108 GALLVQLESEAGVMNVVNTHLGLRS-------------RERLTQAAALLAS-EWLADLSA 153

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           PFV+ GDFN  ++    +     ++D           +        +    + +D+    
Sbjct: 154 PFVLLGDFNA-VSGSKAHSLLTASLDDARRF----GGRSGLRPTFPSRFPILALDHCFFR 208

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +                        +R SDH P+ ID+D
Sbjct: 209 GDLKVRSAYV----------VRSPLVRRASDHLPLVIDFD 238


>gi|270159292|ref|ZP_06187948.1| exodeoxyribonuclease III [Legionella longbeachae D-4968]
 gi|289165884|ref|YP_003456022.1| exodeoxyribonuclease III XthA [Legionella longbeachae NSW150]
 gi|269987631|gb|EEZ93886.1| exodeoxyribonuclease III [Legionella longbeachae D-4968]
 gi|288859057|emb|CBJ12986.1| putative exodeoxyribonuclease III XthA [Legionella longbeachae
           NSW150]
          Length = 259

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 85/303 (28%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L SWN+N+L                      +  +  +   DI+ +QE        K+
Sbjct: 2   IKLASWNVNSL----------------KVRLEQVISWLDSSHVDILAIQE-------TKL 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N     +       +    S    +  +A+  +        +  +           R
Sbjct: 39  IDDNFPRAVF---EEKGYHVVFSGQKTYNGVAIISRYP------FSDVLTDIPDLDDPQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + + V        ++++++ +   L S +  Y           Q + ++I Q+     
Sbjct: 90  RILIVTV----AGFRLINLYVPNGSELTSDKYQYKLD------WLQKVTNFIQQQINIYS 139

Query: 204 PFVIAGDFNRKINYLGNNDDFW-------KTIDPNDSLIRFPKEKDSRCN-------ANK 249
              + GDFN        +D             + N  +                   +  
Sbjct: 140 KIAVVGDFNIAPEDRDVHDPIAWEGSVLVSPAERNAFVQLLQLGFHDSFRNFVQEDQSFS 199

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++ +       Q          D    + +R SDH P+ +
Sbjct: 200 WWDYRAAAFRRNRGLRIDHILLSKELNHLCTQSVI-------DKEPRKVERPSDHAPVWV 252

Query: 301 DYD 303
             +
Sbjct: 253 ALE 255


>gi|264677073|ref|YP_003276979.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2]
 gi|262207585|gb|ACY31683.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2]
          Length = 307

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 90/317 (28%), Gaps = 61/317 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------- 74
            K+ +++WN+      +G+     SV+R       + +  ++   D++ +QE+       
Sbjct: 15  DKMNILTWNVQWCCGMDGLV----SVERIVRHALQMGE--QSGGLDVLCMQEIAVNYPDL 68

Query: 75  -----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                     +  + P        S +                   +  +   +L Q Y 
Sbjct: 69  QGRPGDQLAELKALLPGWQIFFGASVDEFTPRGH------QRFGNLIATRLPVLLVQHYL 122

Query: 130 LLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           L    ++  R   R    + V+      + ++  HL+ F     +    + +   L  QA
Sbjct: 123 LPMPAEADMRCMQRMCSVVTVDDAALGPVRIMTTHLEYFSARQRM--AQAGALRALQMQA 180

Query: 189 QWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDS------ 233
             L D   Q      P+         V+ GDFN + +           +   +       
Sbjct: 181 CALADAPPQPASDGSPYQTKPHTRHAVLCGDFNFEPHEPEYAVLSAPWVAGEEGCLQAGQ 240

Query: 234 -----LIRFPKEKDSRCNA---NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 + +P +                    D   +  +  + +   S           
Sbjct: 241 WRNSWDVLYPGQPQPPTFRLVDRTWGAEPGACDLIWVSDSLCQRVHTWSV---------- 290

Query: 286 KSRGKRLSDHCPISIDY 302
                + SDH P+ +  
Sbjct: 291 -DSATQASDHQPVMLTL 306


>gi|46908012|ref|YP_014401.1| exodeoxyribonuclease [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47094151|ref|ZP_00231871.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b H7858]
 gi|217964070|ref|YP_002349748.1| exodeoxyribonuclease III [Listeria monocytogenes HCC23]
 gi|226224385|ref|YP_002758492.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes Clip81459]
 gi|254826392|ref|ZP_05231393.1| exodeoxyribonuclease [Listeria monocytogenes FSL J1-194]
 gi|254933631|ref|ZP_05266990.1| exodeoxyribonuclease [Listeria monocytogenes HPB2262]
 gi|255521086|ref|ZP_05388323.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J1-175]
 gi|300766428|ref|ZP_07076383.1| exodeoxyribonuclease [Listeria monocytogenes FSL N1-017]
 gi|46881282|gb|AAT04578.1| exodeoxyribonuclease [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47017476|gb|EAL08289.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b H7858]
 gi|217333340|gb|ACK39134.1| exodeoxyribonuclease III [Listeria monocytogenes HCC23]
 gi|225876847|emb|CAS05556.1| Putative 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|293585194|gb|EFF97226.1| exodeoxyribonuclease [Listeria monocytogenes HPB2262]
 gi|293595632|gb|EFG03393.1| exodeoxyribonuclease [Listeria monocytogenes FSL J1-194]
 gi|300512852|gb|EFK39944.1| exodeoxyribonuclease [Listeria monocytogenes FSL N1-017]
 gi|307571362|emb|CAR84541.1| exodeoxyribonuclease [Listeria monocytogenes L99]
 gi|328466425|gb|EGF37573.1| exodeoxyribonuclease III [Listeria monocytogenes 1816]
 gi|332312222|gb|EGJ25317.1| Exodeoxyribonuclease III [Listeria monocytogenes str. Scott A]
          Length = 251

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 84/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y + +DADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +++ ++  +                        + +++    +   
Sbjct: 91  -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|318056396|ref|ZP_07975119.1| large secreted protein [Streptomyces sp. SA3_actG]
 gi|318075703|ref|ZP_07983035.1| large secreted protein [Streptomyces sp. SA3_actF]
          Length = 612

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/329 (10%), Positives = 77/329 (23%), Gaps = 69/329 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72
                   ++ + ++N+  L   +               +  L           DIV ++
Sbjct: 300 SAKPGADDELSVATYNVENLDPTDP-----------QEKFDALADGVVTHLASPDIVSIE 348

Query: 73  EMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           E+   N                     V        +   +   +    +   +I     
Sbjct: 349 EVQDDNGAKDDGTVSAEQTLKKFTDAIVAAGGPRYAWRGIDPENDKDGGEPGGNIRQVFL 408

Query: 116 VRKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEING 154
                V    ++                      P      + +   +R+ +       G
Sbjct: 409 YNPDRVSFTDRAGGDATTATAVVERDGAPALAASPGRVDPANPAWQDSRKPLAGEFVFRG 468

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208
           + ++V+  H  S      L     P    S +    QA  +  ++ Q    +     V+ 
Sbjct: 469 ETVFVVANHFNSKGGDQPLTAAQQPPVRGSETQRHAQAASVNAFVRQLTALDKKARVVVL 528

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GD N         D        N       +             N   +D  ++ +    
Sbjct: 529 GDLNDFEFS----DTTKTLTKGNVLRSGITQLPADERYTYVYQGNSQVLDQILVSKGVKS 584

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           F          + + +        SDH P
Sbjct: 585 FTYDSVHINAEFAQQN--------SDHDP 605


>gi|300123561|emb|CBK24833.2| unnamed protein product [Blastocystis hominis]
          Length = 491

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 76/315 (24%), Gaps = 48/315 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82
           +R+VS+N             +           L+    +  D DI+ LQE+     +   
Sbjct: 186 LRIVSYNAWNTMPASWFITGERRFDWFYKRMQLMAANLRAADPDIIVLQEIRYDETLGDQ 245

Query: 83  -----VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                +         Y       +   +  + +   +AV  K     Q    L       
Sbjct: 246 RRRFQLRHLTELLPDYQYIFQPANMYNEHGSRVEEGVAVLSKFPIRRQDYILLSRDYTDK 305

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                R  +   + +     I V   HL             S S +   +  + L D+I 
Sbjct: 306 QDDHQRLVLHAQIAVPSIGTIHVYGTHL-------------SLSEAARDRTVRELSDFID 352

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR---------------FPKEK 241
               +    V  GD N + +         K                           +  
Sbjct: 353 -WNGANEFSVFCGDLNAEPDSAAIRYLIGKGELGGKRTNYKDAFLQVHPEPKPRSPSEGA 411

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----------- 290
            ++            IDY +  Q +   +  +    I                       
Sbjct: 412 RAKALTFPTDNPVKRIDYIIYKQGSGVHVRVDDSQLIGLKPWSGTETDDLKAGMMSKDSA 471

Query: 291 -RLSDHCPISIDYDF 304
              SDH  +  D+ F
Sbjct: 472 LWPSDHRGVYADFTF 486


>gi|121602003|ref|YP_988961.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
 gi|121602536|ref|YP_988991.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
 gi|120614180|gb|ABM44781.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
 gi|120614713|gb|ABM45314.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
          Length = 263

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 90/303 (29%), Gaps = 66/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNI                    + +  L ++ +    DIV LQE      + + 
Sbjct: 1   MRIATWNIAG----------------IKARHETLCKWLQQNQPDIVCLQE---TKTIDEN 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP++       T   + +            +A+  K       ++      D  +R    
Sbjct: 42  FPRD-------TIESLGYHIETHGQKKFNGVAILSKKRPDEIITHLPGNNNDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   N   I +  ++L +   ++S +  Y        +  + L            
Sbjct: 92  --IEAVYSTNKGAIRIASVYLPNGNPINSEKYLYK------MEWMERLYTHAKSLLTYEE 143

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N                           ++ I             +    + 
Sbjct: 144 PLILAGDYNVIPTLSDAKNPQEWKHDALFLLQTRQAFQRIIHLGFYDALRSVTEDPSFSF 203

Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            N         N I ID+F++   A   L       I           K  SDH P+ I+
Sbjct: 204 WNFQAGAWFKNNGIRIDHFLLSSEAIDQL-------ICAYSQTEVRGYKNPSDHTPVWIE 256

Query: 302 YDF 304
            D+
Sbjct: 257 LDY 259


>gi|71083659|ref|YP_266379.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062772|gb|AAZ21775.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1062]
          Length = 258

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 91/300 (30%), Gaps = 68/300 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWN+N                   +    +++Y +    D+V +QE+ + +       
Sbjct: 3   ITSWNVN----------------SVRARIENIKEYLQKFSPDVVMMQEIKTQDE------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                  Y     +++         +  +A+  K+ ++      L+  K   SR      
Sbjct: 41  ----TFPYDDFSALDYESHVFGQKSYNGVAIISKH-KLENVKIDLIKDKLKQSR-----I 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   ++   K I +++I+  +   +D+ + TY  +          L   +    +     
Sbjct: 91  ISAELKHKKKNIQLINIYTPNGNPVDTDKYTYKKN------WLDKLIKQLKTLSKKNENI 144

Query: 206 VIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           ++AGDFN   +                       ++ +        +      +      
Sbjct: 145 ILAGDFNILPSAEDAYNIKGFEDDALYRLEIRKKFREMINLGFHDAYRHIHGEKEGYTYW 204

Query: 251 LRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +          ID+F++  +    +   +        +       + SDH PI I+ 
Sbjct: 205 DYMRGAWQKNNGLRIDHFLVSNSLLNIVKNVNI-------NKDPRGKGKPSDHTPIEIEL 257


>gi|325845943|ref|ZP_08169141.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325481849|gb|EGC84881.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 348

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 101/321 (31%), Gaps = 60/321 (18%)

Query: 18  ASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             + +  R+++WNI               G  ++  +          +   +KN++ADI 
Sbjct: 49  PEIGKNYRVMTWNIGYGGLDKDTDFFMDGGQMVFPINKNHVEKSIDHIISTSKNINADIK 108

Query: 70  FLQEMG-------SYNAVAKVFPKN--------TWCIFYSTERLINHSKRDSNNDIHTAI 114
             QE+          N V K+             +   +    +    K  S     +  
Sbjct: 109 LFQEVDYDSKRSFHINQVEKLRENLLGSSTFALNFKTDFIPYPIPPMGKVQSGIMTQSDF 168

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            ++K      +  +       +  RA N     + ++ + KK+ ++++HL ++   +   
Sbjct: 169 EIKKSKRYQQEIPHKFPTRLVNLKRAFN--PSYIDIKNSDKKLVIVNVHLDAYESGNKG- 225

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------------YLGNN 221
                       Q + + D++ ++ +     ++ GDFN++++                  
Sbjct: 226 ---------RVAQTKEIIDFVNKEYKKGNYVLVGGDFNQELSGKYKKLPEGIWNPSPFPK 276

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
           +   K I             + +    K       ID F+   N     I+         
Sbjct: 277 EMLTKNIKLYYDKNGKTSVVNDKPYTGK-DAYLSTIDGFLATDNIKIKTIKTQAK----- 330

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                    + SDH P+ +++
Sbjct: 331 ------ENFQYSDHNPVVMEF 345


>gi|258542179|ref|YP_003187612.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01]
 gi|256633257|dbj|BAH99232.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01]
 gi|256636316|dbj|BAI02285.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-03]
 gi|256639369|dbj|BAI05331.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-07]
 gi|256642425|dbj|BAI08380.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-22]
 gi|256645480|dbj|BAI11428.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-26]
 gi|256648533|dbj|BAI14474.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-32]
 gi|256651586|dbj|BAI17520.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654577|dbj|BAI20504.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-12]
          Length = 270

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 86/308 (27%), Gaps = 67/308 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +++RLV+WNIN+L                     LL +  ++L  D+V LQE       
Sbjct: 2   PRRMRLVTWNINSL----------------RLRLPLLEKLVRHLAPDVVCLQE---TKVP 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP++                       +  +A+  ++        P+   K+     
Sbjct: 43  DPLFPEDGVKALGFEHL------HYRGMKGYNGVAILSRHPLKPVTQTPVWYGKEDCRH- 95

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V   V      + + D ++ +    D      +P  +      + + +W   +  
Sbjct: 96  -----VAATVCAPEGDVELHDFYIPAG--GDEPAPETNPKFAHKLAFVEEVTEWFQSRPL 148

Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +    V+ GDFN                  ++     +          +        +  
Sbjct: 149 NRT--VLVGDFNIAPLEHDVWSHKQLLKIVSHTPPETERLNRWLQTGFVDAMRHFVPADE 206

Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+  M  +    L   +               +  SDH
Sbjct: 207 KLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLLPNLHGMTVV-------REARDWESPSDH 259

Query: 296 CPISIDYD 303
            P+ +D+ 
Sbjct: 260 VPVVVDFS 267


>gi|86357361|ref|YP_469253.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
 gi|86281463|gb|ABC90526.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
          Length = 260

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                   T + ++ K    D+  LQE+ + +A    
Sbjct: 1   MKIATYNVNGING----------------RLTNVLRWLKEDGPDVACLQELKTDDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  K    +     L G  D      +R
Sbjct: 41  ------RFPRKELERAGYGAVWHGQRSWNGVAILAKGKTPILTRRGLPGDPDDTH---SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       +           F  +           LS  A  L +         V
Sbjct: 92  YIEAAV----DGMLIGCLYLPNGNPFPGAKFEYKLRWFRRLSAYAAELLEI-------EV 140

Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P ++AGDFN                  +   +                 +          
Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWQDDALFRPEVRTAYAQLVAQGWTDAVRHLHPGERIYT 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +             ID+ ++      +L   S               ++ SDH P+ I
Sbjct: 201 FWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSASVR-------RKPRGWEQTSDHAPVMI 253

Query: 301 DYD 303
           + +
Sbjct: 254 ELE 256


>gi|302537936|ref|ZP_07290278.1| sphingomyelin phosphodiesterase [Streptomyces sp. C]
 gi|302446831|gb|EFL18647.1| sphingomyelin phosphodiesterase [Streptomyces sp. C]
          Length = 329

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 89/301 (29%), Gaps = 31/301 (10%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S   ++ ++++N+  +S+     L+ N  +   +       + +    D+V LQE     
Sbjct: 38  SATPRLSVLTYNVFLMSKS----LYPNWGQDHRAAEIPRASFFQGH--DVVVLQEAFDNG 91

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPL 130
           A   +    +    Y T  +                       + +  K   + ++    
Sbjct: 92  ASDALQANASAQYPYQTPVVGRSKSGWDATGGSYSTTTPEDGGVTILSKWPILRKEQVVY 151

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             A  +   + N+    +++ +NG K+ V+  H +S             +  + S+Q + 
Sbjct: 152 KDACGADWWS-NKGFAYVVLNVNGTKVHVVGTHAQSTDPGCGAG----EAAQMRSRQFKN 206

Query: 191 LKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---- 245
           +  ++      +    ++AGD N                                     
Sbjct: 207 IDAFLDAKNIPANEQVIVAGDMNVDSRTPEYASMLADADLAGADTRTGHPYSFDTAQNSI 266

Query: 246 -NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------KRLSDHCPI 298
            N       +  +DY +  +   +    E+      +     S          LSDH P+
Sbjct: 267 ANYRYPTDPREDLDYVLYRKANARPAGWENNVVKEQSTPWTVSSWGKSYTYSNLSDHYPV 326

Query: 299 S 299
            
Sbjct: 327 I 327


>gi|218532288|ref|YP_002423104.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum
           CM4]
 gi|218524591|gb|ACK85176.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum
           CM4]
          Length = 269

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/306 (9%), Positives = 73/306 (23%), Gaps = 66/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                        + ++ +    D++ LQE         +
Sbjct: 3   LTVTTWNIN----------------SVRLRIESVLRFLREAQPDVLCLQETKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +            +   +    +  +A+  +   + +         D+      R
Sbjct: 44  FPLKAFKG------SGYENIVFAGQKGYNGVAIISRFPLLTRDVMSFCERPDA------R 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +L    G    ++          D      +P  +        L+ W  ++     
Sbjct: 92  HISAVLGPEAGPAAGIVLHDFYVPAGGDMPHRDLNPKFAHKLDFLSELRGWGGRRVSG-- 149

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                   +     +           +             
Sbjct: 150 PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVETEALETLRGEAGWIDAARLLTPEPEKI 209

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  +          +             +R SDH P
Sbjct: 210 YTWWSYRSPNWELANKGRRLDHTWVSPDLAG-------TVRRVAVFREARGWERPSDHVP 262

Query: 298 ISIDYD 303
           +++  +
Sbjct: 263 VTLTLE 268


>gi|156933850|ref|YP_001437766.1| hypothetical protein ESA_01676 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532104|gb|ABU76930.1| hypothetical protein ESA_01676 [Cronobacter sakazakii ATCC BAA-894]
          Length = 370

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 84/258 (32%), Gaps = 19/258 (7%)

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            +   +L+AD++ + E  S  A+A    +    +     R +     +    I   +   
Sbjct: 119 AKVMSDLNADVLAVVEAESRPALAAFNQEIIAALGGEPFRHVMVIDGNDTRGIDVGLLTG 178

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                 L +S+                    +   +G  +WV+  HLKS  +        
Sbjct: 179 ANYPIGLMRSHVDDRDARGQLIFSRDCPEYSVPLKSGDTLWVMVNHLKSKGYGG-----K 233

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKT-IDPNDSLI 235
           + S +    QAQ + +    ++++   F+ IAGDFN             +T +    +  
Sbjct: 234 AESDARRKAQAQRVAEIYKARRDAGEQFIAIAGDFNDTPESDALAPLLKETDLRDAFTHP 293

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF----------SEILYNEDDI 285
            F          N    NK  +DY ++    ++ +                       ++
Sbjct: 294 AFDNGGYPGTWGNSAKNNK--LDYILLSPALWERVTAGGVIRKGMWPGERPVKWEVYPEL 351

Query: 286 KSRGKRLSDHCPISIDYD 303
           K   +  SDH  + +D +
Sbjct: 352 KKPQQAGSDHAALWVDLN 369


>gi|260433435|ref|ZP_05787406.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417263|gb|EEX10522.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157]
          Length = 259

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 85/305 (27%), Gaps = 72/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ S+NIN                   +    L ++  +   D+  LQE+     N   
Sbjct: 1   MKIASFNING----------------IKARADALLRWLDDARPDVAVLQEIKSVDENFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F +  + +                      +AV  K               D  +R  
Sbjct: 45  EIFEERGYNV------------ETHGQKSFNGVAVLSKLPLEDVTRGLPGDDDDEQARW- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E  V +  K + +  ++L +       +  Y  +        + L     +  +S
Sbjct: 92  ----IEATV-VGKKALRICGLYLPNGNPAPGPKFDYKLA------WMERLHQRAVELLKS 140

Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++AGD+N                       +   ++ I        F        +
Sbjct: 141 EEPALMAGDYNVIPQAEDAKRPEAWREDALFRSESRAAFRRILNLGFTDAFRARTQGPGH 200

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             ID+F++   A   L            D      ++ SDH PI
Sbjct: 201 YTFWDYQAGAWNRNDGIRIDHFLLTPQAADLLQDC-------RIDAEVRGQEKPSDHVPI 253

Query: 299 SIDYD 303
            +D D
Sbjct: 254 WVDLD 258


>gi|304438523|ref|ZP_07398463.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368606|gb|EFM22291.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 250

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 74/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VSWN+N L                        +  K LDAD   LQE         +
Sbjct: 1   MRFVSWNVNGLRAALKKGFM---------------EAFKELDADAFCLQETKMQEG-QAI 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++ +     +          +  A+  +   +       +   D   R    
Sbjct: 45  LDLPGYEQYFYSAEKKGY----------SGTAIFTRVKPLSVAYGIGIPEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +    ++++ ++  +        +               L+           
Sbjct: 91  -----VITMEFNDVYLVTVYTPNAKRALERLDYRMTWEDAFRAFLLDLRA--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +     +  F         A 
Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFTELLNAGFVDTFRALYPDLTGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     +        ++            SDHCP+S
Sbjct: 198 TWWSYLRHARETNAGWRIDYFLVSEELRDRIAAAEIHADVF-----------GSDHCPVS 246

Query: 300 IDY 302
           +  
Sbjct: 247 LTL 249


>gi|91785939|ref|YP_546891.1| endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666]
 gi|91695164|gb|ABE41993.1| Endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666]
          Length = 267

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 82/287 (28%), Gaps = 50/287 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79
            ++++ NI+                        LR+  + + AD+VFLQE+   +     
Sbjct: 23  FKVLTVNIHKGFTFFNRKF----------ILPELREAVRTVGADVVFLQEVTGNHLKHAD 72

Query: 80  -VAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                     +     T      + +     + H   AV  K   V  ++  +  +    
Sbjct: 73  KFDNYPDTPHYEFLADTIWPQFAYGRNAVYTNGHHGNAVLSKFPIVRFENRDVSISG--- 129

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  +   +++ G+ + V  + +                 +   QQ + L D + +
Sbjct: 130 --PERRGLLHCELKVPGRSVNVHAVCVHLGL-----------METHRVQQMEMLCDLVRK 176

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKIP 256
                 P V+AGDFN               ++    L   F +               + 
Sbjct: 177 DIPPHAPVVVAGDFNDW------RLRAHTLLESGADLHEVFVQANGQAARTFPARLPLLR 230

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D   +        +                    LSDH P++ + +
Sbjct: 231 LDRIYVRNAIGHAPVVLP-----------SRPWSHLSDHAPLAAEIE 266


>gi|16803822|ref|NP_465307.1| hypothetical protein lmo1782 [Listeria monocytogenes EGD-e]
 gi|16411236|emb|CAC99860.1| lmo1782 [Listeria monocytogenes EGD-e]
          Length = 251

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 85/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y + +DADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +++ ++  +                        + +++    ++  
Sbjct: 91  -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDNTK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|289628537|ref|ZP_06461491.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289649841|ref|ZP_06481184.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330870432|gb|EGH05141.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 380

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 96/325 (29%), Gaps = 68/325 (20%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+                  + + +    +   + +  ++   DIV 
Sbjct: 69  GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128

Query: 71  LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LQ +                   VA ++P +T   ++  E + N     S      A   
Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFVPNPHIWGS-VGRKLATLS 187

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
           R       +   P+  A     +   + A+ +      +G K+ V++  L          
Sbjct: 188 RFHIDSAERVQLPVPDANIISRQFQPKDALLISYLPLRDGGKLAVINTSLT--------- 238

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228
            T   +     +Q    +  + + +    P++I GDFN             + +      
Sbjct: 239 -TARHAGDTAQKQVVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPKEQRLGYAADS 297

Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274
              +  +     P   +S    R     +  N   I       DY     +  +     S
Sbjct: 298 ELHELWEKYPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 353

Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299
                 +          +SDH P+ 
Sbjct: 354 ARVRRDDTLL-------ISDHLPVI 371


>gi|302897971|ref|XP_003047751.1| hypothetical protein NECHADRAFT_72444 [Nectria haematococca mpVI
           77-13-4]
 gi|256728682|gb|EEU42038.1| hypothetical protein NECHADRAFT_72444 [Nectria haematococca mpVI
           77-13-4]
          Length = 305

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 77/292 (26%), Gaps = 25/292 (8%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+V++N+   +        K    R       L       ++  + LQE         
Sbjct: 25  PLRIVTFNVRY-ATTNFEPHEKPWDVRCPKLVNQLSFITAGHESPFICLQECLYPQVKDI 83

Query: 83  VFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + W           H    S     +     +++        P       +    
Sbjct: 84  QSRLGDGWSHIGRGRGSGEHDGEFSPIFYRSDNWSCERSEVRWLSKTPF-EPSRGWDAVL 142

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           NR          G    V+ +      F          S  LL + A+   +W +    S
Sbjct: 143 NRIVTMGEFLHRGTGTRVIVMSTH---FDHIGVKARENSAKLLIKFAR---EWGSGGVGS 196

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK------- 254
               ++ GDFN   N  G           +D     PK              K       
Sbjct: 197 PSAVLVGGDFNSSPNDGGYKIMTAPDSGMSDISHLLPKSAHYGNQITYTSFGKYDSSGEG 256

Query: 255 ---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+  + +     +         +++D       R+SDH P+  D D
Sbjct: 257 WEEARIDFLFIQEPRTAHVKTFGVLANFFDDDV------RVSDHRPVVSDLD 302


>gi|91794256|ref|YP_563907.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans
           OS217]
 gi|91716258|gb|ABE56184.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans
           OS217]
          Length = 873

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/371 (11%), Positives = 92/371 (24%), Gaps = 88/371 (23%)

Query: 22  QKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQE 73
             +R+ S+N+          +      N    T  D     T +      ++ADIV L E
Sbjct: 463 GDIRVASFNVLNFFNDAVGGDANPGGSNRGALTEEDMLKQRTKIVSAITAMNADIVGLME 522

Query: 74  MGSYNAVA-------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           + +                  ++     +             K   ++ I   +  R K 
Sbjct: 523 IANNGFGEQSAIQNLLTALNAELTADEAYSFVELEAADKFEGKYFGSDAITVGMLYRAKT 582

Query: 121 VRVLQQSYPLLGA------------------KDSFSRAGNRRAVELLVEINGKKIWVLDI 162
           V +   +  ++                     ++ + A  R ++     I  KK+ V+  
Sbjct: 583 VSLASPAKVIITPEQHAAEGVATREKAGKVETNTGNDAYQRHSLAQTFSIQDKKLTVVVN 642

Query: 163 HLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES---------- 201
           H KS                   +            A+ L + +   +            
Sbjct: 643 HFKSKGSGCLEDWVSFEDKSDPADMQGKCNEFRVSAAKVLGESLKDVEGDLLVIGDLNAY 702

Query: 202 --LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPKEKDSRCN 246
               P  +  D++   +        W T++                 +    K       
Sbjct: 703 GMEDPLRVLTDYDASQSDRDIVTASWTTLNGKIYEKEGTKIEKGYGLINLNTKAHGVSTY 762

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR-------------GKRLS 293
           +         +D+ + + +    ++      I   E  +                    S
Sbjct: 763 SYSYNGELGNLDHALGNASLAAKVVGIEDWHINSVESTLFEYPSKFTGDLLKSDNAFSAS 822

Query: 294 DHCPISIDYDF 304
           DH P+ +   +
Sbjct: 823 DHDPVIVALSY 833


>gi|188581164|ref|YP_001924609.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001]
 gi|179344662|gb|ACB80074.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001]
          Length = 264

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 80/303 (26%), Gaps = 64/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  +      D+V LQE+   +     
Sbjct: 1   MRITTWNVN----------------SIKQRVGHLLGFLDEAKPDVVCLQELKCQDT---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++        +  +A+  +    LQ +  L G          R
Sbjct: 41  ------SFPREEIEAAGYAVETLGQKAYNGVALLVRAP--LQYTQLLRGLPGDAEDEQAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L+       + +  I+L +       + +Y  +          LK        S  
Sbjct: 93  YIEALVHGEGVAPVRIASIYLPNGNPAPGPKYSYKLAFMAR------LKAHARALMASED 146

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+AGDFN                           F   +    +      E  +    
Sbjct: 147 ALVLAGDFNVIPEPEDAADPAAWTQDALFLPETRRAFRALLAEGFTDGLRACEPSAGLYT 206

Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +           I ID+ ++   A   L+  S  +            ++ SDH P+++
Sbjct: 207 FWDYQAGCWPRNFGIRIDHLLLSPQAADRLVSASVQKH-------LRGLEKPSDHVPVTV 259

Query: 301 DYD 303
           +  
Sbjct: 260 ELS 262


>gi|229134542|ref|ZP_04263353.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST196]
 gi|228648935|gb|EEL04959.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST196]
          Length = 252

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 84/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPISVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFDDFYMITLYTPNSKRGLERLDYRMEWEDDFRAYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  +     +  +      +  A 
Sbjct: 139 PVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTCVLEAGFIDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     +            D   +     SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVISERLKHKI-----------TDAKINSEIMGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|254437353|ref|ZP_05050847.1| exodeoxyribonuclease III [Octadecabacter antarcticus 307]
 gi|198252799|gb|EDY77113.1| exodeoxyribonuclease III [Octadecabacter antarcticus 307]
          Length = 266

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 83/308 (26%), Gaps = 71/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  + +    D+  LQE+ S   V + 
Sbjct: 1   MKIATFNING----------------VKARIGALTDWLEASKPDVALLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRA 140
           FP+  +         + +            +A+  K                 ++     
Sbjct: 42  FPREHF-------ENLGYRVETHGQKGFNGVAILSKLPLEDISRGLPDAAGAGREGVDDI 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     ++    K I +  ++L +       +  Y        +    LK    Q   
Sbjct: 95  EARYIEATVI--GEKAIRICGLYLPNGNPAPGPKYDYK------LRWMDRLKTRAQQLMA 146

Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
              PF++AGD+N                       +   F + ++    L    +     
Sbjct: 147 LEEPFLMAGDYNIIPQPEDAARPNVWTDDALFRPDSRAAFRRLLNLG--LTEAFRACHQG 204

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           ID+F++       L                   ++ SDH
Sbjct: 205 SGHYSFWDYQAGAWDKNDGIRIDHFLLSNQCADLLKDAWIE-------SGVRGREKPSDH 257

Query: 296 CPISIDYD 303
            P+ ++ D
Sbjct: 258 VPVWVELD 265


>gi|296113240|ref|YP_003627178.1| exodeoxyribonuclease III [Moraxella catarrhalis RH4]
 gi|295920934|gb|ADG61285.1| exodeoxyribonuclease III [Moraxella catarrhalis RH4]
 gi|326560231|gb|EGE10619.1| exonuclease III [Moraxella catarrhalis 7169]
 gi|326562876|gb|EGE13163.1| exonuclease III [Moraxella catarrhalis 46P47B1]
 gi|326563683|gb|EGE13935.1| exonuclease III [Moraxella catarrhalis 103P14B1]
 gi|326565237|gb|EGE15422.1| exonuclease III [Moraxella catarrhalis 12P80B1]
 gi|326566451|gb|EGE16601.1| exonuclease III [Moraxella catarrhalis BC1]
 gi|326570258|gb|EGE20303.1| exonuclease III [Moraxella catarrhalis BC8]
 gi|326570995|gb|EGE21019.1| exonuclease III [Moraxella catarrhalis BC7]
 gi|326573291|gb|EGE23259.1| exonuclease III [Moraxella catarrhalis 101P30B1]
 gi|326575810|gb|EGE25733.1| exonuclease III [Moraxella catarrhalis CO72]
 gi|326576891|gb|EGE26797.1| exonuclease III [Moraxella catarrhalis O35E]
          Length = 271

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 83/311 (26%), Gaps = 75/311 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
             VS+NIN L  +                   +R       ADI+ LQE   ++A+    
Sbjct: 3   TFVSFNINGLRARPH-------------QLEAIRDIL---GADIIGLQETKVHDAL---- 42

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                    +  + + +         H  +A+  K      Q     G  D+      RR
Sbjct: 43  ------FPVNMVQDLGYHVEFFGQKSHYGVALASKIAPTFVQKGFPFGHDDA-----QRR 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +    + +G+ I VL+       F      ++     +  +    L  +I + +     
Sbjct: 92  LIHARYDFDGRSIDVLN-----GYFPQGENRSHEIKFPMKREFYADLNRYIDELQADGRE 146

Query: 205 FVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +I GD N                        ++L     +++ +        +      
Sbjct: 147 LIIMGDMNISPEDIDVGIGAANAKRWLAKGTCSFLPEERAWYQMLMSTGLTDTYRLFYPK 206

Query: 244 RCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
             +       +             ID+ +         +                   + 
Sbjct: 207 SHDEFSWFDYRSRGFEDTPKRGLRIDHILCTDTLKNDCVAAGI-------SYDIRAMDKP 259

Query: 293 SDHCPISIDYD 303
           SDH PI   ++
Sbjct: 260 SDHAPIWAKFN 270


>gi|291515221|emb|CBK64431.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 306

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 82/285 (28%), Gaps = 33/285 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++R++S+N+   S  +G + W N           +     +    ++ +QE        
Sbjct: 52  NQLRVMSFNVRYSSGDDGANSWDNRK-------KAVPAMFADQQPTVLGVQEARLDQKTY 104

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +           ++               +K         P + +   +  + 
Sbjct: 105 MDENCAGYKSVGVGRTDGQNAGEFMAIYYLADAVKLEKWGTFWLSDTPDVPSV-GWDAST 163

Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R A   L     +G+K + ++ H+     + + ++             + ++  I    
Sbjct: 164 YRTATWALFTHYKSGRKFFYVNTHIDHVGQVAAQKS------------MELIEAKIRSLN 211

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P V+  DFN+ ++     D   K +    +       K S  N          ID+
Sbjct: 212 PDNQPTVLTADFNKMLDS-PIFDGVKKFMADARTTAPVTDNKASFNNFGGATNYP-RIDH 269

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                                  D    +   +SDH PI+   +F
Sbjct: 270 IFSSGFTPLRF---------ATVDQRYEKVPYISDHYPIAAVLEF 305


>gi|308813431|ref|XP_003084022.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
 gi|116055904|emb|CAL57989.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
          Length = 603

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 89/305 (29%), Gaps = 50/305 (16%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+VSW              + ++ +  S  T  R+Y + LDAD++ LQE+  Y+      
Sbjct: 323 RVVSW-------------TERALMKAKSRLTRTREYIRELDADVLCLQELDGYDDDGSAV 369

Query: 85  PKNTWCIFYSTERLINHSKRDSNN----DIHTAIAVRK--------------KNVRVLQQ 126
              +   + S      +  R           + +A R+                   +  
Sbjct: 370 TSTSLPSWRSWLESEGYDSRHVRRTNTKKDGSCVAWRRNAFTCVDHRAVSYNDIAHEMYS 429

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEI-------NGKKIWVLDIHLKSFCFLDSLENTYSP 179
                   D  S    R   + +  +       +G ++ V   H+  F      +     
Sbjct: 430 KSDNGDVDDERSDERERYLRDCVANLTVLKRMRDGAEVLVCSTHI--FWDPQYSDVKVQQ 487

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +  L+ +  +++ +  +   +     +I GDFN + +              +        
Sbjct: 488 AKRLVEECERFVDERASAGSDVRPHVIIGGDFNSEPDSDVYRVMTATFSSAS-------- 539

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                   N        IDY  +        ++E        E          SDH P+ 
Sbjct: 540 SGREPAFTNVTPSFTACIDYIFVSDGITVTRVKEQPRRETLGE--GLPNETHPSDHLPVV 597

Query: 300 IDYDF 304
           +D  F
Sbjct: 598 VDVSF 602


>gi|292670448|ref|ZP_06603874.1| exodeoxyribonuclease III [Selenomonas noxia ATCC 43541]
 gi|292647858|gb|EFF65830.1| exodeoxyribonuclease III [Selenomonas noxia ATCC 43541]
          Length = 250

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 77/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VSWN+N L         ++                K L+AD+  LQE         +
Sbjct: 1   MRFVSWNVNGLRAALKKGFMES---------------FKELNADVFCLQETKMQEG-QAI 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++ +     +          +  A+  +   +       +   D+  R    
Sbjct: 45  LDLPGYEQYFYSAEKKGY----------SGTAIFTRVKPLSVSYGIGIEEHDNEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +    ++++ ++  +        +               L+           
Sbjct: 91  -----VITMELPDVYLVTVYTPNAKRALERLDYRMAWEDSFRAFLLDLRA--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +     +  F      R  A 
Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFGELLAAGFVDTFRALYPDRTGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++       +        ++            SDHCP+S
Sbjct: 198 TWWSYLRHARETNAGWRIDYFLVSAELRDRIAAAEIHSDIF-----------GSDHCPVS 246

Query: 300 IDY 302
           +  
Sbjct: 247 LTL 249


>gi|16799425|ref|NP_469693.1| hypothetical protein lin0348 [Listeria innocua Clip11262]
 gi|16412777|emb|CAC95581.1| lin0348 [Listeria innocua Clip11262]
          Length = 257

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 77/286 (26%), Gaps = 36/286 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI      E    W+     T                D + ++E      +  +
Sbjct: 2   FSVTTFNIRFDDTSEQKKSWELRKTLTK-------SLLDKYQWDFMGVEEPLLPQ-MRDM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++A     +         P + +  S +    R
Sbjct: 54  KEMLDWDYFGVGRDDGFEKGEFTAVFYNSARFSLLQEGHFWLSETPDVPSIHSTAM-FPR 112

Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             V   +E   +G++ ++ + HL                       A  L          
Sbjct: 113 ICVWGKLEDSTDGRQFYIFNTHLDHVS-------------EEARLFASQLLLQKAGLIAE 159

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPID 258
            +P ++ GDFN +      N    K  D         K      +  + LR       ID
Sbjct: 160 NLPVILLGDFNTEPETPTYNFITKKYQDAQLISQTPIKGPIGSFHDFQPLRPENELEKID 219

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Y  + +          F    Y     +  G   SDH P++   ++
Sbjct: 220 YIFVSKE---------FRVHSYKTITDQVDGCSASDHFPVTATLEW 256


>gi|197106969|ref|YP_002132346.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
 gi|196480389|gb|ACG79917.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
          Length = 268

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/305 (9%), Positives = 73/305 (23%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        + ++ +    D++ LQE+         
Sbjct: 3   LRICTWNVN----------------SVRLRVEQVARFVREQAPDVLCLQEIKCREG---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +   +     R +       +A+  +          +     +    G  
Sbjct: 43  -----EFPVNAFAEMGLPHVRIAGQKGWHGVAIASRLPIEDAPRLDVCREGHARCVGGTV 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             VE+              +       D+ +   +P         + L   + ++     
Sbjct: 98  AGVEVH-------------NFYIPAGGDTPDREPNPKFDHKLDFYEKLTAELAKR-NPKA 143

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P  + GD N                   +     + F K +     +     +       
Sbjct: 144 PLAVVGDLNVAPGEHDVWNHRYMSKVVSHTPAEVEAFGKLVASLGFIDLPRAQTPEPEKV 203

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+ ++     +               D     +R SDH P
Sbjct: 204 FSWWSYRAADFRASNRGLRLDHILVTPGLKE--AAFRLGSAASRVHDDVRAWERPSDHAP 261

Query: 298 ISIDY 302
           ++ D 
Sbjct: 262 VTADL 266


>gi|145545333|ref|XP_001458351.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426170|emb|CAK90954.1| unnamed protein product [Paramecium tetraurelia]
          Length = 326

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 89/308 (28%), Gaps = 39/308 (12%)

Query: 22  QKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + ++S+NI      EQ   S       +  +  T +    KN +ADI+ LQE+ +   
Sbjct: 31  HTISILSYNILADIYCEQSYFSYADFQNLKFLNRSTKIIDQLKNFNADILCLQEVDNIEF 90

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    + I Y      +     +       I +       L Q     G    + R
Sbjct: 91  YQDNIKNLQYDICYCQRPQRSDGCLIAFKIEKFKILI--SQEYSLDQLALDYGLPLQYLR 148

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QK 198
               + V L   +  K+  + +IH       D           L   Q   L  ++  QK
Sbjct: 149 QNVFQIVRLEHLLTKKQFIIGNIHTFWNPNQDD----------LKFFQIVQLVQFMEAQK 198

Query: 199 KESLVPFVIAGDFNRKINYLGN----------------------NDDFWKTIDPNDSLIR 236
           +      +  GDFN                               +D ++   P   L  
Sbjct: 199 ESEDQILIFCGDFNSLPKSNPIQYIQKNNPIVERIEMSTNQIKLQNDIFQHYGPPK-LNW 257

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                      N     K  IDY     NA    I    ++ L  ++         SDH 
Sbjct: 258 ESAYHPFPTFTNYTNNFKGCIDYIYY-HNAKVEKILSIPNQSLLQKEVALPNSNFPSDHV 316

Query: 297 PISIDYDF 304
           PI   +DF
Sbjct: 317 PILAYFDF 324


>gi|148550719|ref|YP_001260158.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1]
 gi|148503138|gb|ABQ71391.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1]
          Length = 269

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 80/302 (26%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ +    D+V LQE          
Sbjct: 1   MKIATYNVNGVNG----------------RLPVLLRWLEEAQPDVVVLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S  R + +            +A+  +   + +    L G  D      +R
Sbjct: 35  LKAPQEKFPESAIRDLGYDVIWHGQKSWNGVALLSRVGEIHETRRGLPGDPDPG---QSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I +  ++L +       +  Y        +    L +      ES +
Sbjct: 92  YIEAAV-----NGILIGGLYLPNGNPRPGPKFDYK------LRWFDRLIEHAAGLLESGL 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGDFN     L                     +  +                    
Sbjct: 141 PVMLAGDFNVMPTDLDVYKPERWLDDALFAPEVRAAYFRLLDQGWTDALRTLHPGEVIYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          ID+ ++       L       +    D      ++ SDH P+ I
Sbjct: 201 FWDYFRNAYGRNAGLRIDHLLLSPALADRL-------LDAQVDRHVRGWEKTSDHAPVWI 253

Query: 301 DY 302
           + 
Sbjct: 254 EL 255


>gi|117925756|ref|YP_866373.1| exodeoxyribonuclease III [Magnetococcus sp. MC-1]
 gi|117609512|gb|ABK44967.1| Exodeoxyribonuclease III [Magnetococcus sp. MC-1]
          Length = 257

 Score = 89.6 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 87/304 (28%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ +WN+N+++                     + Q+      D++ LQE+   S    A
Sbjct: 1   MRIATWNVNSMN----------------VRQEHVAQWLAEDPCDLLCLQELKMVSEKFPA 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    W +              +    +  +AV  +     +     L   D      
Sbjct: 45  ERFKSLGWHLL------------ANGQKTYNGVAVLSRFPLEERDVVLDLPGVD----PA 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +R + + V      + V++ ++ +   + S +  Y             L+ ++  +  S
Sbjct: 89  QKRLMAVTVN----GVRVVNCYVPNGSEVGSDKYHYKLD------WLAKLQSFVQAQLAS 138

Query: 202 LVPFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNA 247
               V+ GD+N   +    +D      K +                L    +        
Sbjct: 139 YPQLVVLGDYNIAPDDRDVHDVSFWAGKILVSPPERSAYQALCGLGLTDAFRHLQPEGGY 198

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +         + ID+ +        L            D      +R SDH P+
Sbjct: 199 FSWWDYRLGSFQRNMGVRIDHLLSSPALTAKLTHCHI-------DREPRGWERPSDHAPV 251

Query: 299 SIDY 302
              Y
Sbjct: 252 IATY 255


>gi|333027971|ref|ZP_08456035.1| putative large secreted protein [Streptomyces sp. Tu6071]
 gi|332747823|gb|EGJ78264.1| putative large secreted protein [Streptomyces sp. Tu6071]
          Length = 612

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/329 (10%), Positives = 78/329 (23%), Gaps = 69/329 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72
                   ++ + ++N+  L   +               +  L           DIV ++
Sbjct: 300 SAKPGADDELSVATYNVENLDPTDP-----------QEKFDALADGVVTHLASPDIVSIE 348

Query: 73  EMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           E+   N                     V        +   +   +    +   +I     
Sbjct: 349 EVQDDNGAKDDGTVSAEQTLKKFTDAIVAAGGPRYAWRGIDPENDKDGGEPGGNIRQVFL 408

Query: 116 VRKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEING 154
                V    ++                      P      + +   +R+ +       G
Sbjct: 409 YNPDRVSFTDRAGGDATTATAVVERDGAPALAASPGRVDPANPAWQDSRKPLAGEFVFRG 468

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208
           + ++V+  H  S      L     P    S +    QA  +  ++ Q    +     V+ 
Sbjct: 469 ETVFVVANHFNSKGGDQPLTAAQQPPVRGSETQRHAQAASVNAFVRQLTALDKKARVVVL 528

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GD N               +  +        E+           N   +D  ++ +    
Sbjct: 529 GDLNDFEFSDTTKTLTKGNVLRSGIAQLPSDER----YTYVYQGNSQVLDQILVSKGVKS 584

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           F          + + +        SDH P
Sbjct: 585 FTYDSVHINAEFAQQN--------SDHDP 605


>gi|326922202|ref|XP_003207340.1| PREDICTED: endonuclease/exonuclease/phosphatase family
           domain-containing protein 1-like, partial [Meleagris
           gallopavo]
          Length = 471

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/296 (9%), Positives = 76/296 (25%), Gaps = 37/296 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+                        ++          ++ +QE+    A+ K 
Sbjct: 166 LRVATWNLQ---------SCSIEKANNPGVREVICMTLLENSIKLLAVQELLDREALEKF 216

Query: 84  FPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRKKNVR-VLQQSYPL 130
             +       +  +                S +      ++           +   S+  
Sbjct: 217 CMELNQPTLPNIRKWKGPRGCWKGVVSEKPSGQLPKGVEYSGFLWDTTAGIELKDASFQE 276

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   R           ++    + ++++HL     +         S          
Sbjct: 277 NVQTNGNGRHSYPHPYIAHFKVGMNDLTLVNLHLALAPAVGDNAGKNHDSHK-----LAT 331

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDFN+  +   ++      +         P    +   + KN
Sbjct: 332 FAQTLQESLKGEKDVIILGDFNQAPDSSDHD-----ILRKEKFHHLVPSNTFTNI-STKN 385

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          SDHCP+  ++
Sbjct: 386 PQGSKSLDNMWISRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASDHCPVLAEF 441


>gi|284031341|ref|YP_003381272.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836]
 gi|283810634|gb|ADB32473.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836]
          Length = 267

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/304 (9%), Positives = 79/304 (25%), Gaps = 63/304 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ + N+N +                 +    +  + +  D +++ LQE+ + + V + 
Sbjct: 2   LKVATVNVNGVRA---------------AYRRGMAPWLERTDPELLLLQEVRATDEVLRD 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W + ++         R         +AV  +     ++                R
Sbjct: 47  HLGGDWQLVHAEPVTEGSKGRA-------GVAVASRRPIKAER----TDIGPERFTGCGR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V  +G  +  +  ++ +  F          +          +   +T+ +    
Sbjct: 96  WVEADVVLDDGSTLTAVSTYVFTGEFETPPRQEEKYAF------LDAITVRLTELRADGR 149

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                    L     +   +     +    +         
Sbjct: 150 HVLMCGDLNIAHREVDLKAWKANRKKSGFLPEERAWLDRLFEAGWVDLGRRFGGDGPGPY 209

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY +            +        D   +  +R SDH P+ 
Sbjct: 210 SWWSWRGKAFDNDAGWRIDYQIASPELAAAATGCTV-------DRAPTYAERWSDHAPVV 262

Query: 300 IDYD 303
             Y+
Sbjct: 263 ATYE 266


>gi|187735459|ref|YP_001877571.1| exodeoxyribonuclease III Xth [Akkermansia muciniphila ATCC BAA-835]
 gi|187425511|gb|ACD04790.1| exodeoxyribonuclease III Xth [Akkermansia muciniphila ATCC BAA-835]
          Length = 253

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 75/304 (24%), Gaps = 76/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L    G                 +      L+ D++ LQE+ +     K 
Sbjct: 1   MKLVSWNVNGLRAVLGKG---------------MADAVDALEPDVLCLQEIKARPEQVKD 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              ++W                     ++ + +  +         PL  +        +R
Sbjct: 46  LWISSWPHQLWNPAEKA---------GYSGVLILSRV-------RPLSTSVGIGWPEHDR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E  G   ++++ +  +               +   +    L +          
Sbjct: 90  EGRVCTMEFEG--FYLVNCYTPNSQNELVRLPYREQWDAAFREYVAGLAE--------TK 139

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                           +  +        F           
Sbjct: 140 PVVFCGDLNVAHEEIDIARPKENRFSAGFSDQERAGFTLLLEAGFTDTFRALHPEEPGWY 199

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +       +   +                  SDHCP+S
Sbjct: 200 SWWSYRAGARARNIGWRIDYFCVSNPLASRVKDAAIH-----------PDVTGSDHCPVS 248

Query: 300 IDYD 303
           ++ D
Sbjct: 249 LEID 252


>gi|332307725|ref|YP_004435576.1| Endonuclease I [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175054|gb|AEE24308.1| Endonuclease I [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 1500

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 94/328 (28%), Gaps = 53/328 (16%)

Query: 22   QKVRLVSWNINTLSEQEGVSLW-----------KNSVKRTTSDYTLLRQYAKNLDADIVF 70
              +++ S N+        VS              +S +               +DADIV 
Sbjct: 1110 GNLKVASLNVLNYFNTLDVSPNLCGPSNLECRGADSEEEFERQRAKTLAALLAMDADIVG 1169

Query: 71   LQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---- 121
            L E+ +      +AV  +       +  +T  +++       + I  A+  +   V    
Sbjct: 1170 LMEVENNGFGTSSAVGDLVSGLNDVLGANTYAVVDAGSAIGTDAISVALIYKPAVVSAIG 1229

Query: 122  ---RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKS-----FCFLD 171
                +   +         F    NR A+        N +++ +   H KS         D
Sbjct: 1230 APAILDSSNSISDDDGPLFLDTKNRPALNQKFALTENNEELVISVNHFKSKGSSCGAGDD 1289

Query: 172  SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                         ++ AQ L  +++++     P +I GD N         +   K ++  
Sbjct: 1290 DTTTGQGNCNLTRTRAAQALTTFLSEQFAET-PKLIIGDLNA----YALEEPILKILEQ- 1343

Query: 232  DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
                   K       +         +D+ +        ++  +   I  +E  +      
Sbjct: 1344 GYTNLANKFGGDEAYSYSFGGEFGYLDHALASAELVDKVVDTTEWHINADEPIVFDYNVE 1403

Query: 290  ---------------KRLSDHCPISIDY 302
                            R+SDH P+ I  
Sbjct: 1404 FKSEQQHIDYYAPDAYRMSDHDPVVISL 1431


>gi|160872135|ref|ZP_02062267.1| exodeoxyribonuclease III [Rickettsiella grylli]
 gi|159120934|gb|EDP46272.1| exodeoxyribonuclease III [Rickettsiella grylli]
          Length = 261

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++ +WNIN+L                      +  +       ++ LQE    N     
Sbjct: 5   FKIATWNINSL----------------RIRLAHVLTWLNTHQPHLLALQETKVQN----- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +   +    +    +  +A   +   +  +   L    D+      R
Sbjct: 44  -----HHFPEEPFKRAGYHVLYNGQKTYNGVAFISRIP-MQNEVTCLPHFDDT-----QR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + + +      + +++I++ +   L S +  Y        +  + LK ++  +     
Sbjct: 93  RILVVTI----GSLRIVNIYVPNGSHLGSEKFLYK------LKWLKQLKIYLQHELSLHP 142

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
             ++ GDFN        +D      K +                L    +   +  +   
Sbjct: 143 SLIVLGDFNIAPKDNDVHDPQIWQGKVLVSPQERKALQDIVALGLKDSFRLFHNEPHQYT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ +   +     I           D    R ++ SDH P+  
Sbjct: 203 WWDYRAGAFRRNHGLRIDHILSSTHLISQCIDCEI-------DKEIRRWEKPSDHVPVIA 255

Query: 301 DY 302
            Y
Sbjct: 256 TY 257


>gi|319952732|ref|YP_004163999.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
 gi|319421392|gb|ADV48501.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
          Length = 347

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 83/345 (24%), Gaps = 53/345 (15%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSE-------QEGVSLWKNSVKRTT 51
           + K +   +  +     +  +  ++     +N+  L +        +     +     T 
Sbjct: 1   MNKLLFLFLTLINFNLHAQKKNYKIRTIAFYNVENLFDLKNDSLTYDDDRTPEGKDHWTL 60

Query: 52  SDYTL-----------LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100
             Y             +         DI+ L E+ +   V  +               I 
Sbjct: 61  DRYEEKLTHVSKVLSEIGHTISKNSPDIIGLCEVENQQVVEDLV---YHKNLQDKNYGIV 117

Query: 101 HSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
           H        I  A+  +K   +    +S  LL       R   R  + +   ++ ++I+ 
Sbjct: 118 HFDSPDERGIDVALLYKKSAFIPTSFKSQRLLLQNSEGFRDYTRDQLVVGGLLDNEQIYF 177

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S    ++         + L+++   +   I     +    +  GD N       
Sbjct: 178 IVNHWPSRSGGEARSKPNRIEAAKLNKRI--IDSIIRTDSSAK--IISMGDLNDDPTSDS 233

Query: 220 NNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--- 271
                        ++  D      K       +          D F    N         
Sbjct: 234 LKKILKTIGDVNKLEEKDLYNPMEKLHKKGIGSLAYRDKWNLFDQFFFTNNLISENKESF 293

Query: 272 ----------------QESFSEILYNEDDIKSRGKRLSDHCPISI 300
                              +           +     SDH P+ +
Sbjct: 294 TFWKAGVFAPSYLLDPSGRYKGYPLRTYAGGNYVGGYSDHFPVYM 338


>gi|251800194|ref|YP_003014925.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. JDR-2]
 gi|247547820|gb|ACT04839.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. JDR-2]
          Length = 264

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 89/291 (30%), Gaps = 38/291 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ ++++N+     Q+G   W   V R T          +     ++  QE    + +  
Sbjct: 3   EISVMTFNLRYPEIQDGSDYWPERVDRAT-------NVIRKHHPLLIGTQEGYH-SMLKD 54

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  +     +    R   H    +    +      ++N +      P   A  S+  +  
Sbjct: 55  LEIELYEYDWVGRGRFGEHENEHNAIFYNRDELTVEENGQFWLSETPESEASVSWDSSFP 114

Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKK 199
           R           +GK  ++ + HL            +S        Q   + +++  Q+ 
Sbjct: 115 RICTWARFHHRRSGKSFYLYNTHLDH----------HSQEAKDRGIQV--IGEYMAKQRA 162

Query: 200 ESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              +P ++ GDFN               +   K     D+  +  +      ++ K   +
Sbjct: 163 LDGLPALLTGDFNSYPGEFPIRFLRGEIEIDGKKSGLTDAYSQIAENPGLTFHSFKGGDS 222

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             PIDY           +           D  +  G+  SDH P+     F
Sbjct: 223 GEPIDYIFATAEFQFLSV---------QIDRSQVNGRYPSDHYPVVAAIRF 264


>gi|325285062|ref|YP_004260852.1| Endonuclease I [Cellulophaga lytica DSM 7489]
 gi|324320516|gb|ADY27981.1| Endonuclease I [Cellulophaga lytica DSM 7489]
          Length = 1889

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 84/308 (27%), Gaps = 39/308 (12%)

Query: 22   QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            + + +V+WNI    ++        S           +     LDADI  ++E+      A
Sbjct: 1304 KTLDVVAWNIEWFGDEANSPAA-GSPMSDAIQKDSTKAIIAKLDADIYAVEEIADETLFA 1362

Query: 82   KVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------YPLLGAK 134
            ++  +   +    S      +                   V V+         +P+    
Sbjct: 1363 QMVSELPGYDYVLSPAVSYPND---PGVSQKLGFIYNTATVNVVNTKVLLQTIHPMYNGG 1419

Query: 135  DS-------------FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            D              ++       +   V ING    +  + L +     +         
Sbjct: 1420 DDSALINYPSATDRFYASGRLPFLMTADVTINGATEQINVVALHARANSGT---DAQGRY 1476

Query: 182  SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR----- 236
             +     + LKD +  +       ++ GD+N  ++    +     T   N          
Sbjct: 1477 DMRKYDVEVLKDTLDVQYADKK-LILLGDYNDDVDTTVADITTTTTSSFNAYATDEVNYN 1535

Query: 237  --FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                   D    +     N   ID+  +        I ES       E         +SD
Sbjct: 1536 IVSKTLSDQDFRSYVFRENM--IDHITITNELNDNYIAESARVHY--EFYDSDYPNTVSD 1591

Query: 295  HCPISIDY 302
            H P+S  +
Sbjct: 1592 HFPVSARF 1599


>gi|311109471|ref|YP_003982324.1| endonuclease/exonuclease/phosphatase family protein 2
           [Achromobacter xylosoxidans A8]
 gi|310764160|gb|ADP19609.1| endonuclease/exonuclease/phosphatase family protein 2
           [Achromobacter xylosoxidans A8]
          Length = 288

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 89/324 (27%), Gaps = 85/324 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+NI+             S          LR     L  D+VFLQE+   N    +
Sbjct: 4   IRVVSYNIH----------KGRSALGRRDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSL 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  +    + + +    ++     A+  +   +  ++  +     S  R   R
Sbjct: 54  LDAQHESLAAALRLDVAYGRNAIRHETDHGNALLSRFPILDHENLDI-----SDHRLEQR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +E+ G+ +    +HL  F                 S+Q   L + I +      
Sbjct: 109 GLLHARIELGGRAVHCFVVHLGLFAGS-------------RSRQILALTERIRRMVPDGE 155

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243
           P +IAGDFN   + L     F + +   +     P+                        
Sbjct: 156 PILIAGDFNDWGDRLAP--LFVQQLGLYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLP 213

Query: 244 ------------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                                          +     +D         +     S   + 
Sbjct: 214 NGGVSVMERTNQLGMGDSSRLLLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR 268

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
                      RLSDH P+  + +
Sbjct: 269 ------GREWARLSDHSPLLAELE 286


>gi|294777115|ref|ZP_06742572.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|294448984|gb|EFG17527.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
          Length = 450

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/287 (10%), Positives = 78/287 (27%), Gaps = 25/287 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N             +     T   +  +    K   ADI  + E+   +     
Sbjct: 172 LKVMSFNAENFYMYGNTGNAE-----TLRQHAKILAALKEAKADIYAICEVEQGDFTVDY 226

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++             ++    ++ + T + +  K   +  + +      +   R    
Sbjct: 227 LCRSLNNALGEERYAWLNTPGQKSSKVQTNVFIYDKVKVLPYKEFKSYNFDNLKMRY--- 283

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201
                 ++ +  K+ +   H K+        +    S      +A+       +      
Sbjct: 284 IVQCFELKDDKAKVILAMNHFKAKTSGIDKNDGQGGSADRRVMEARECLKVYNELVAYYE 343

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               ++ GD N             K       +    K   +   +         +D+ +
Sbjct: 344 DTDVLVLGDLNSYGMEDAI-----KVFTDAGYINLLKKYSPA-AWSYCYRGEVGYLDHSL 397

Query: 262 MDQNAYKFLIQESFSEILYNED---------DIKSRGKRLSDHCPIS 299
                   ++  +  +I  +E            +    R SDH P+ 
Sbjct: 398 SSPTLTSQIVGAAPWDINASEPAYWGFKYTSYYREDLYRSSDHNPVI 444


>gi|288917707|ref|ZP_06412070.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f]
 gi|288350922|gb|EFC85136.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f]
          Length = 263

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 84/307 (27%), Gaps = 73/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ + N+N +                 +    +  + ++   DI+ +QE+ + +A+   
Sbjct: 2   LRVATVNVNGIRA---------------ARRRGMGTWLEDRRPDILCVQEVRADDAILAD 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W I +            S       +AV  +   V  +                 
Sbjct: 47  AVGPGWHIVH----------EASAAKGRAGVAVLSRAAPVDVRLGLGDFTGSGRW----- 91

Query: 144 RAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             VE    ++G    + V+ +++ +      L+                +++ + +    
Sbjct: 92  --VEADFSLDGDPGLLTVVSVYVHTGEADTPLQEEKYR-------FLAAIRERMAKLAAD 142

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD N     +                       +    +  +         + 
Sbjct: 143 GRHVLVCGDLNICHREIDLKNWKGNLKKAGFLPQERAWLDQLFTDDGFVDLVRNFAGEQP 202

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY +      + L+  +        D   +  +R SDH 
Sbjct: 203 GPYTWWSWRGRAYDTDAGWRIDYLISTGQLAERLLSAAV-------DRAPAYDQRWSDHA 255

Query: 297 PISIDYD 303
           P+  D+D
Sbjct: 256 PVYTDFD 262


>gi|254486542|ref|ZP_05099747.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. GAI101]
 gi|214043411|gb|EEB84049.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. GAI101]
          Length = 341

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/341 (14%), Positives = 97/341 (28%), Gaps = 62/341 (18%)

Query: 24  VRLVSWNINTLSE----QEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ ++N+   +     ++ +        R           L    + LDAD V + E  
Sbjct: 1   MRIATYNVEWFAGLFDQEDRLYNDAGWSARHNVTRAQQTRALGTVFRALDADAVMIIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             +              +   R        +N+     IA+     ++     P     D
Sbjct: 61  DQSGKQGTVAALEGFAAHFGLRTSAAIMGFANHTQQE-IALLYDPAKITATHTPGGPVTD 119

Query: 136 SFS-RAGNR--RAVELLVEIN---------------------GKKIWVLDIHLKSFCFLD 171
           +   R   R    + + ++I+                     G    ++  HLKS     
Sbjct: 120 ANGARGAPRFDGILRIDLDIDAREDLVVFSKPPLELSIETASGFSFQMIGAHLKSKAPHG 179

Query: 172 SLENTYS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-- 224
           +     +      +      QA WL+  I +  E   P ++ GD N         D F  
Sbjct: 180 AKNEADALRIGIANRRKQLAQAIWLRGRIDEHLERGSPLMVMGDLNDGPGLDAFEDFFGR 239

Query: 225 ------------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY 267
                       +   DP+ +     +       +           +  +DY ++     
Sbjct: 240 SSVEIVLGHRGAFALTDPHATRALGQRIGAMPTTSRFWIAPEKRYLQALLDYIMVSPQFT 299

Query: 268 KFLIQESFSEILYNEDDIKSRGKR-----LSDHCPISIDYD 303
               +      L + +       R      SDH P++I++D
Sbjct: 300 DNNARWRIWHPLDDPECWADADLRDALVTASDHFPVTIEFD 340


>gi|57239110|ref|YP_180246.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden]
 gi|58579057|ref|YP_197269.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden]
 gi|57161189|emb|CAH58103.1| putative exodeoxyribonuclease [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417683|emb|CAI26887.1| Exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden]
          Length = 278

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 90/316 (28%), Gaps = 76/316 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  +  + + DI  LQE+   N     
Sbjct: 2   LRIATWNVN----------------SIRKRIDHLCTWLTDYNIDIALLQEIKCTND---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----------- 132
                        + + ++           +A+  K   V +    +             
Sbjct: 42  ------QFPALEIKSLGYNYYVHGQKARNGVAIITKYPIVEEVVTNIFSLYGTSNVCCEL 95

Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                +++   +R  +E ++  NG KI V  I++ +   ++S       +          
Sbjct: 96  GSEDFTYNCEESRY-LECVILYNGIKIRVGSIYVPNGQSVES------DAFQYKLGFFDQ 148

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLI 235
           LK++++   +     ++ GD+N     +                   + +++I       
Sbjct: 149 LKEYMSFLLKKEEICILGGDYNVAPYPIDMYSYEIMNGKLCCHQFEREKFRSIINTGFFD 208

Query: 236 RFP---KEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            F     +K      N    +        ID  ++   A   +             D   
Sbjct: 209 AFRLLNNDKKQFTWWNYKFGSWQENKGLRIDMLLLSPQAMDKVSSCVVH-------DGLR 261

Query: 288 RGKRLSDHCPISIDYD 303
                SDH P+  D +
Sbjct: 262 GLNVPSDHVPVVCDLN 277


>gi|89070957|ref|ZP_01158183.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola
           granulosus HTCC2516]
 gi|89043464|gb|EAR49678.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola
           granulosus HTCC2516]
          Length = 333

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/332 (10%), Positives = 84/332 (25%), Gaps = 52/332 (15%)

Query: 24  VRLVSWNINTLSEQEGVSL----WKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ ++N+   +     +       +   R           L      LDAD V + E  
Sbjct: 1   MRIATYNVEWFASLFDDAGHLLEDDDWSARRDVTRRDQLNALGAVFGALDADAVMVVEAP 60

Query: 76  SYNAVAKVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126
             +A          +   +            +      A+      + V           
Sbjct: 61  DSHARRDGVAALRNFAAHFGLRAREAVMGYVNQTQQEIALLYDPDALEVRHDPLDLGAPR 120

Query: 127 -------SYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS 178
                     +  A ++   +     + +      + ++  + +  K+     S      
Sbjct: 121 FDKQLRIDLDIDSAPETVRFSKPPLELAVTTRAGNRLRLIGVHVKSKAPHGARSAAEILR 180

Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226
            S +   +Q      L+  +  +       ++ GDFN           F +         
Sbjct: 181 ISIANRRKQLAQCIWLRRRVEAQLARGDSLIVLGDFNDGPGLDEYEKLFGRSGVEIVLGI 240

Query: 227 ----TIDPNDSLIRFPKEKDSRCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFS 276
                +    +     +   +R ++ +             +DY ++  +           
Sbjct: 241 GEELQLHDPHAAAILSRPTLARPSSARFRVPPDGRFLAAMLDYVMVSPDLAARYPAWRIW 300

Query: 277 EILYNEDDIKSRGKR-----LSDHCPISIDYD 303
               +         R      SDH P+S+D D
Sbjct: 301 HPFEDPALFADPDLRHALLTASDHFPVSLDLD 332


>gi|302518359|ref|ZP_07270701.1| large secreted protein [Streptomyces sp. SPB78]
 gi|302427254|gb|EFK99069.1| large secreted protein [Streptomyces sp. SPB78]
          Length = 612

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/329 (10%), Positives = 78/329 (23%), Gaps = 69/329 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72
                   ++ + ++N+  L   +               +  L           DIV ++
Sbjct: 300 SAKPGADDELSVATYNVENLDPTDP-----------QEKFDALADGVVTHLASPDIVSIE 348

Query: 73  EMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           E+   N                     V        +   +   +    +   +I     
Sbjct: 349 EVQDDNGAKDDGTVSAEQTLRKFTDAIVAAGGPRYAWRGIDPENDKDGGEPGGNIRQVFL 408

Query: 116 VRKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEING 154
                V    ++                      P      + +   +R+ +       G
Sbjct: 409 YNPDRVSFTDRAGGEATTATAVVERDGAPALAASPGRVDPANPAWQDSRKPLAGEFVFRG 468

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208
           + ++V+  H  S      L     P    S +    QA  +  ++ Q    +     V+ 
Sbjct: 469 ETVFVVANHFNSKGGDQPLTAAQQPPVRGSETQRHAQAASVNAFVRQLTALDKKARVVVL 528

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GD N               +  +        E+           N   +D  ++ +    
Sbjct: 529 GDLNDFEFSDTTKTLTKGNVLRSGIAQLPADER----YTYVYQGNSQVLDQILVSKGVKS 584

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           F          + + +        SDH P
Sbjct: 585 FTYDSVHINAEFAQQN--------SDHDP 605


>gi|150398248|ref|YP_001328715.1| exodeoxyribonuclease III [Sinorhizobium medicae WSM419]
 gi|150029763|gb|ABR61880.1| exodeoxyribonuclease III [Sinorhizobium medicae WSM419]
          Length = 268

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/309 (10%), Positives = 79/309 (25%), Gaps = 71/309 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
            + + +WNIN                       L+  + K    DI+ LQE+   +    
Sbjct: 2   PLSIATWNIN----------------SVRLRMPLVEHFLKTWQPDILCLQEIKCINDQFP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +    K  +                     +  +A   +        + L   +D     
Sbjct: 46  SAPLRKLGYEYI-----------EMHGQKGYHGVATISRLPL-----HQLSDRRDYCGIG 89

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  + ++    GK I + + ++ +    D  + T +P           +   +  + E
Sbjct: 90  DARH-LSVVFAAGGKTIRLHNFYVPAG--GDEPDRTVNPKFGHKLDFVDEM-KLLHAEAE 145

Query: 201 SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             +  ++ GD N                   +     +     +     +    +     
Sbjct: 146 EGISSILVGDLNIAPLEHDVWSHKQLLKIVSHTPIETEGLISVMTGGAWVDLMRRHTPPP 205

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+     +    L++                 +R SD
Sbjct: 206 EKLYTWWSYRAKDWAAADRGRRLDHIWSSADLANQLVRVEII-------KEARGWERPSD 258

Query: 295 HCPISIDYD 303
           H P+   ++
Sbjct: 259 HVPVIAHFE 267


>gi|237747027|ref|ZP_04577507.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes
           HOxBLS]
 gi|229378378|gb|EEO28469.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes
           HOxBLS]
          Length = 264

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 95/302 (31%), Gaps = 64/302 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80
           ++R+ ++NI+  +  +   +              L++  ++L AD++FLQE+   + +  
Sbjct: 2   ELRIATYNIHKGASIDHRPV-----------IQELKRSIRSLSADVIFLQEVQGRHDLMA 50

Query: 81  ---AKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              A ++       + +   L   + K    +  H   A+      V Q          S
Sbjct: 51  NRHALLWQDQGQHAYLAGSSLYCAYGKNAVYDYGHHGNALLSAYPIVSQ-----YNTDVS 105

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                +R  +  +++    K++   IHL  F                  +Q   L D + 
Sbjct: 106 DHALESRGILHCVLQTPETKVYCYVIHLGLFNGS-------------RVRQTHALIDTVQ 152

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-----------RFPKEKDSRC 245
           +   +  P +IAGDFN   N L   D   KT+   +               FP+      
Sbjct: 153 RSAPNDAPVIIAGDFNDWNNNLS--DLLRKTLRVKEVFDEMAEREERKKSFFPRLTGKVP 210

Query: 246 NANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +D   +          +S   +        S    LSDH P+  
Sbjct: 211 KPLPARTFPALFPFFRLDRIYVRG-----FQVDSACVM------QGSPWTALSDHAPLVA 259

Query: 301 DY 302
             
Sbjct: 260 SL 261


>gi|313680366|ref|YP_004058105.1| exodeoxyribonuclease III xth [Oceanithermus profundus DSM 14977]
 gi|313153081|gb|ADR36932.1| exodeoxyribonuclease III Xth [Oceanithermus profundus DSM 14977]
          Length = 252

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 75/304 (24%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L SWN+N L        W                  + LDAD++ LQE+ +       
Sbjct: 1   MKLASWNVNGLRAALKKGFW---------------DVVRGLDADVLGLQEVRAEEPPELP 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++            +   +  +AV  +   +           D   R    
Sbjct: 46  EGLGGYRWYWNP----------GDRKGYAGVAVLVRVPPLDVTYGIGHDEFDEEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +V++ +  +                 +    + L+           
Sbjct: 92  -----VITLEYERYYVVNAYFPNAGRGLPRLGYKLAFDQAIENYLEGLRAR--------K 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                          +         +  F         A 
Sbjct: 139 GVVLMGDLNVAHREIDIARPKQNQKSAGFTPEERAWIDAFLKKGWIDTFRHLHPDATGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY ++ ++    L            D         SDH P+ 
Sbjct: 199 TWWTYRFNARAKNIGWRIDYILISEDLLPHL-----------MDAYIYYDAYASDHVPVV 247

Query: 300 IDYD 303
              D
Sbjct: 248 AVLD 251


>gi|126657177|ref|ZP_01728343.1| Exodeoxyribonuclease III xth [Cyanothece sp. CCY0110]
 gi|126621448|gb|EAZ92159.1| Exodeoxyribonuclease III xth [Cyanothece sp. CCY0110]
          Length = 262

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 98/306 (32%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                   +    +  +  N   D++ LQE  +   +   
Sbjct: 1   MKIATWNVN----------------SIRTRKPHVVDWLTNNSIDVLCLQETKVIDQDFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F +  + ++   ++  N            AI  R+    V+    P++G + +     
Sbjct: 45  EPFEELGYHVYIYGQKAYN----------GVAIFSRQPMTDVITGFTPMVGEEIAQQFDE 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKE 200
            +R +  +++     I ++++++ +   + S +  Y        Q  + LK ++    K+
Sbjct: 95  QKRVISGVID----GIRIINLYVPNGASVGSEKYEYK------LQWFKVLKAYLDNLIKK 144

Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                 I GDFN  +                      +  + I        F K      
Sbjct: 145 ESYELCICGDFNIALEDKDIYNSKGKENHIMSSPLEREALEKILKIGLKDAFRKFTTEGG 204

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           ID+  +    Y+  +  +       ++       R SDH 
Sbjct: 205 H-FSWWDYRSGGLQRNRGWRIDHLYLTNKLYEKAVNCTIDIEPRKQE-------RPSDHT 256

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 257 PVILEI 262


>gi|119484378|ref|ZP_01618995.1| Endonuclease/exonuclease/phosphatase [Lyngbya sp. PCC 8106]
 gi|119457852|gb|EAW38975.1| Endonuclease/exonuclease/phosphatase [Lyngbya sp. PCC 8106]
          Length = 331

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 100/304 (32%), Gaps = 46/304 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------ 75
           +   ++++NI  LS        K        +  L     K  +AD + LQE+       
Sbjct: 52  ETYTVITYNIGYLSGLTNNQAVKREKVLFDENLELAIAALKPFNADFIALQEVDFASQRS 111

Query: 76  -SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-------TAIAVRKKNVRVLQQS 127
              N V ++     + +  +     N+        I+       +  A+  +    L + 
Sbjct: 112 YDVNQVQELATALKFPVQATAINWDNNYVPFPTFPIYAHFGKMLSGQAILSRYPIELNER 171

Query: 128 YPLLGAKDSFSRAGN----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
             L    +           R A    ++I    + ++++HL++F                
Sbjct: 172 IVLEQVTNKPFYENAFYLDRLAQVSRIKIANHILILINVHLEAF------------DQPT 219

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEK- 241
             +Q+Q++ +          P ++ GDFN +     N +      ++       FP +  
Sbjct: 220 RLKQSQFVLELFLSF-SQKYPVLLIGDFNSEPPSEINLEPTINLFLNTPGIQSAFPPKTL 278

Query: 242 -DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                    + +    IDY   +QN  + +  +  ++IL             SDH P+ +
Sbjct: 279 NHPENGTYPSDQPHRTIDYIFYNQNKIEAIEWQVVTDIL------------ASDHLPVVM 326

Query: 301 DYDF 304
            + F
Sbjct: 327 KFRF 330


>gi|15966954|ref|NP_387307.1| putative exodeoxyribonuclease III protein [Sinorhizobium meliloti
           1021]
 gi|307301727|ref|ZP_07581486.1| exodeoxyribonuclease III [Sinorhizobium meliloti BL225C]
 gi|307316249|ref|ZP_07595693.1| exodeoxyribonuclease III [Sinorhizobium meliloti AK83]
 gi|15076227|emb|CAC47780.1| Putative exodeoxyribonuclease III [Sinorhizobium meliloti 1021]
 gi|306898089|gb|EFN28831.1| exodeoxyribonuclease III [Sinorhizobium meliloti AK83]
 gi|306903425|gb|EFN34014.1| exodeoxyribonuclease III [Sinorhizobium meliloti BL225C]
          Length = 268

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 79/308 (25%), Gaps = 69/308 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + +WNIN                       L+  + K    DI+ LQE+   N    
Sbjct: 2   PLSIATWNIN----------------SVRLRMPLVEHFLKTWQPDILCLQEIKCRND--- 42

Query: 83  VFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                      +  R + +          +  +A   +                      
Sbjct: 43  -------QFPSAPLRKLGYEYIEMHGQKGYHGVATISRLPLHELSDRRDYCGVGDARH-- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               + ++    GK I + + ++ +    D  + T +P           +   +  + E+
Sbjct: 94  ----LSVVFAAGGKTIRLHNFYVPAG--GDEPDRTVNPKFGHKLDFVDEM-KLLHAEAEA 146

Query: 202 LVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRC 245
            V  ++ GD N     + + ++    K +                   +    +      
Sbjct: 147 GVSSILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETEGLVSVMTGGAWVDLMRRHAPPPE 206

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +    L++                 +R SDH
Sbjct: 207 KLYTWWSYRAKDWTAADRGRRLDHIWSSADLASQLVRVEI-------LKEARGWERPSDH 259

Query: 296 CPISIDYD 303
            P+   ++
Sbjct: 260 VPVIAHFE 267


>gi|296444974|ref|ZP_06886936.1| Endonuclease/exonuclease/phosphatase [Methylosinus trichosporium
           OB3b]
 gi|296257642|gb|EFH04707.1| Endonuclease/exonuclease/phosphatase [Methylosinus trichosporium
           OB3b]
          Length = 325

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 95/321 (29%), Gaps = 46/321 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           +   RLVS+N   L       L      R     ++LR     + ADI+ LQE+ +    
Sbjct: 2   SAPFRLVSFNTENLDWSPAGEL------RFKRRLSVLRPLLAAVAADILCLQEVDAQRPT 55

Query: 79  --------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                   A+ ++     +  F +             +  + AI  R   V   Q  + +
Sbjct: 56  PHAPRRFIALDRLVAGTAYEGF-ARATSRRPGTDAPADVHNLAILSRWPIVATRQLHHDI 114

Query: 131 LGAKDSFSRA-----------GNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYS 178
           +        A            +R A+   +       + VL++HL++   +     + +
Sbjct: 115 VAPWRWTPPAGRGVAAPIEIVFDRPALYARIAPPHGPELHVLNLHLRAPRAVPLPGTSGA 174

Query: 179 P-----------SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFW 225
                       +      QA   + ++      +      + GDFN + +         
Sbjct: 175 RSGPVFAEGQFLAAQKREGQALETRLFVDALFDDDKDASIAVCGDFNSESHDAPARILRG 234

Query: 226 KTIDPND----SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
              +  +          +  +S   +  +   +  +D+ ++ +       +         
Sbjct: 235 AAEEDAEAPFALTALAERLAESARYSVIHAGRRTLLDHILVSRALAARCARVEIMNEGLA 294

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
           ++         S H PI   +
Sbjct: 295 DEATAPDPILGSLHAPIMASF 315


>gi|260887970|ref|ZP_05899233.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
 gi|330838548|ref|YP_004413128.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
 gi|260862221|gb|EEX76721.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
 gi|329746312|gb|AEB99668.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
          Length = 250

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 76/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VSWN+N L    G    ++                K LDAD+  +QE         +
Sbjct: 1   MRFVSWNVNGLRACLGKGFMQS---------------FKALDADVFGVQETK-MQPEQAI 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++++     +          +  AV  +   +       +   D   R    
Sbjct: 45  LELTGYKQYWNSAEKKGY----------SGTAVFSRIEPLSVSYGLGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +    ++ + ++  +                        L        ++  
Sbjct: 91  -----VIALEFDDLYFVTVYTPNSQRGLERLAYRMTWEEAFRDYLLAL--------DAKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                         +    +        F      +    
Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKTNRKNAGFTDEEREKMTELLAAGFTDTFRALYPDKTGIY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++       + + +    ++            SDHCP+ 
Sbjct: 198 TWWSYLRKARETNAGWRIDYFLVSDRLAPKIKEATIHNEVF-----------GSDHCPVG 246

Query: 300 IDY 302
           +  
Sbjct: 247 LVL 249


>gi|218898840|ref|YP_002447251.1| exodeoxyribonuclease III [Bacillus cereus G9842]
 gi|218542018|gb|ACK94412.1| exodeoxyribonuclease III [Bacillus cereus G9842]
          Length = 252

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 84/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKVQSGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEGYYTYW-----------NYAVKKGYSGTAIFTKKEPLSVTYGLEIEEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  +++ ++  +        +             + L        +   
Sbjct: 93  ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +      +  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYSDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|146276446|ref|YP_001166605.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554687|gb|ABP69300.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC
           17025]
          Length = 339

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/338 (12%), Positives = 103/338 (30%), Gaps = 56/338 (16%)

Query: 21  AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72
            Q++R+ ++N+   +    ++  +        R      +    L      LDAD + + 
Sbjct: 2   GQRLRIATYNVEWFNALFDDRGRLLADNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E  ++                + E   + +     N+    IA+     R+  +  P  G
Sbjct: 62  EAPNHGRRRSTVKALE-TFARTFELRASQAIMGFANETDQEIALLFDPSRIEARHDPQAG 120

Query: 133 AKDSFSR----------------AGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLE 174
            K                       ++  +EL V  +G  + ++ +H KS       +  
Sbjct: 121 PKAPRFDGIFRFDIDVDAAPEAIRFSKPPLELAVRADGHALRLIGVHAKSKAGRGARNGA 180

Query: 175 NTYSPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------- 224
                +     QQ     W++  +          ++ GDFN           F       
Sbjct: 181 EEVRIAIQNRRQQLAECVWIRRRVAALLARHQSVMVMGDFNDGPGLDEYEKLFGHSGVEI 240

Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYK-- 268
                     +  +P+  +    +      +A           +  +D+ ++  +  +  
Sbjct: 241 VLGLDEPPELRLHEPHARMALTQRVGVQPSSARFWLAPEDQYFEALLDFIMISPDLAEKG 300

Query: 269 --FLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYD 303
             + I    ++   +   +++      SDH P+++D +
Sbjct: 301 PRWRIWHPLNDPNCFRIPELQEALLAASDHFPVTLDIE 338


>gi|257455364|ref|ZP_05620599.1| exodeoxyribonuclease III [Enhydrobacter aerosaccus SK60]
 gi|257447326|gb|EEV22334.1| exodeoxyribonuclease III [Enhydrobacter aerosaccus SK60]
          Length = 270

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 89/310 (28%), Gaps = 76/310 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R VS+NIN L  +                   +R        D++ LQE   ++      
Sbjct: 3   RFVSFNINGLRARPH-------------QLEAIRDIIA---PDVIGLQETKVHDDA---- 42

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                     + + + +         H  +A+  +   +  Q      + D+      RR
Sbjct: 43  ------FPLQSVQQLGYHVEFFGQKSHYGVALLSRQKPIFVQKGFPTDSDDA-----QRR 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +    + NGK I VL+       F       +     +  +    L D+I Q K     
Sbjct: 92  FIHARYDFNGKYIDVLN-----GYFPQGENRKHETKFPMKRKFYADLTDYILQLKAENRS 146

Query: 205 FVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            ++ GD N                        ++L    ++++ +   D    + +   +
Sbjct: 147 MILMGDMNIAPLDFDIGISEDSVKRWLKNGTCSFLPEEREWYQALLATDLHDTY-RALYA 205

Query: 244 RCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
              A      +             ID+ +M  +    L                   ++ 
Sbjct: 206 DGQALSWFDYRSKGFDDEPKRGLRIDHILMTPDLADKLNGAGV-------SYDLRAMEKP 258

Query: 293 SDHCPISIDY 302
           SDH PI  D+
Sbjct: 259 SDHAPIWADF 268


>gi|170782608|ref|YP_001710942.1| hypothetical protein CMS_2268 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157178|emb|CAQ02359.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 273

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 93/291 (31%), Gaps = 37/291 (12%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--G 75
            +    + L+S N+             +  +R       L ++ +     ++ +QE    
Sbjct: 7   PTTGDDIHLISLNVRMPWHGTREGEADHWPERQEV----LTRFLQQERPTVLGVQEALWP 62

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              A+ K  P  ++ +        +H +  +     + + + + +V  L    P +    
Sbjct: 63  QIQAIEKALP-PSYRMVGQGREGGSHGEHGAIFYQASRLTLLEHDVMWL-SDTPDVIGSM 120

Query: 136 SFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           ++     R       +    G  + VLD HL             + +  + ++ A     
Sbjct: 121 TWGNPMPRILTWARFQDEATGHPLVVLDTHLDHDVAEARDRAAEAIAELVRTRFA----- 175

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                    +P V+ GDFN  ++     D   +     DS +   ++         + R 
Sbjct: 176 --------GLPLVLMGDFNAPVDS-FPYDALTRRAGLRDSWLDTARQATPAFGTFPDYRP 226

Query: 254 KI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +     ID+ ++ +                  +D   RG+ +SDH P+  
Sbjct: 227 PVVGAPRIDWILVSER---------VDVRAAAVNDFTWRGRMMSDHLPVQA 268


>gi|154251747|ref|YP_001412571.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1]
 gi|154155697|gb|ABS62914.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1]
          Length = 268

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/309 (9%), Positives = 73/309 (23%), Gaps = 73/309 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
            +++ +WNIN                       L+ +       D++ LQE+   +    
Sbjct: 2   DIKIATWNIN----------------SVRLRINLVERLIAEESPDVLCLQEIKCINDAFP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K      +                     +  +A   +       S       D     
Sbjct: 46  LKALKAAGYEHIAV-----------HGQKGYHGVATLSRIPFKKVDSMNFCEKGDCRH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK-K 199
                +   +++ G  + V + ++ +    D  +   +P  +      + +         
Sbjct: 93  -----LATDLDMPGG-MRVHNFYVPAG--GDEPDPEINPKFAHKLAFVREMTRLYDGHRT 144

Query: 200 ESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +S    V+ GD N                   +         + I  +D +    +    
Sbjct: 145 KSQNRMVLVGDLNIAPLEHDVWSHKQLLKVVSHTPVEVALMNELIASHDWVDVMRRFVPD 204

Query: 244 RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                     +            +D+  +        +  +               +R S
Sbjct: 205 NEKLYSWWSYRAKDWLAADRGRRLDHIWVTPALADTPVSMTVR-------KDARGWERAS 257

Query: 294 DHCPISIDY 302
           DH P+    
Sbjct: 258 DHAPVVATL 266


>gi|229691|pdb|1ATN|D Chain D, Atomic Structure Of The Actin:dnase I Complex
          Length = 260

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 91/285 (31%), Gaps = 30/285 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +++ ++NI T  E               +  + + +  +    DIV +QE+   + VA  
Sbjct: 1   LKIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVG 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+          +   +++     ++         R   V VL       G  +  + + 
Sbjct: 50  KLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCGNCGNDSF 109

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R    +    +  K+    I        D++    S     L  Q +W  +        
Sbjct: 110 SREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN-------- 161

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               ++ GDFN   +Y+ ++      +  + +      +       + N       D  V
Sbjct: 162 --DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIV 215

Query: 262 MDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303
           +  +  +  ++  S +   +      S      +SDH P+ +   
Sbjct: 216 VAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 260


>gi|301057309|ref|ZP_07198427.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
 gi|300448539|gb|EFK12186.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
          Length = 258

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 96/286 (33%), Gaps = 37/286 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++++N+   ++Q+G + W            L+ +  +    DI+  QE          
Sbjct: 1   MRVMTFNLRFENDQDGANAWSC-------RRDLVVKLIERYAPDILGTQEGRISPLAYLD 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                + I   +  +    +  +         + +     L ++ P +     +  A  R
Sbjct: 54  AHLTKYDIHMPSRVIDKTCQYPTLFFRRDRFRILEGKEFWLSKT-PGIHRSKDWDSAFPR 112

Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 +E+  +G+   V   HL                 +   +QA+ +  W+ +    
Sbjct: 113 MVSTATLELRESGRIFSVAVTHLDHMGQ------------TARLKQAEIISRWVRE---K 157

Query: 202 LVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNL-RNKIPID 258
            VP ++ GDFN   +   +         +     ++   + K+S  +        K  ID
Sbjct: 158 TVPVILMGDFNDGPHSDAHAVLASSQTGLSDVWQVLGHAEGKESFTHHGFTGVPKKSRID 217

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           + +  +    + +        ++       G+  SDH P  +D+ +
Sbjct: 218 WILSSK--PPYAVDARLLHDQFD-------GRYPSDHFPYYVDFTW 254


>gi|319782958|ref|YP_004142434.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168846|gb|ADV12384.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 370

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/367 (12%), Positives = 103/367 (28%), Gaps = 86/367 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVK----------------RTTSDYTLLRQ------- 59
            +RL ++N+  L  +   S ++N +                 R       + Q       
Sbjct: 2   SLRLATFNVENLMNRFDYSGYRNQLNEDRTLALFDIQSEAEYRMLEQARAIAQSDDTRQL 61

Query: 60  ---YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                    ADI+ +QE+ +  A+        + +     R    +  + +  I  A+ +
Sbjct: 62  TALAIAATRADIICMQEVDNIEALKAFEYGYLFKMVGQGYRQKYTTSGNDSRGIDVAVMM 121

Query: 117 R------KKNVRVLQQSYPLLG--------------AKDSFSRAGNRRAVELLVEINGKK 156
           R      +    V   S+  +                  +  R   R  +E+ V + G  
Sbjct: 122 RNETAQGQPIEFVRMTSHAYVTYEQFGLHTPELEALGNQANERIFRRDCLEIDVTVGGVP 181

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV----PFVIAGDFN 212
           + +  +H KS     +  +    +  +   +AQ ++  I ++          + I GD N
Sbjct: 182 LTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIIEERFGKDYAADKRWAICGDMN 241

Query: 213 RKINYLGNNDDF---------------WKTIDPNDS-LIRFPKEKDSRCNANKNLRNKI- 255
                +    D                   +           +  +    +  + R    
Sbjct: 242 DYRQRVKVAGDAIDGYRFEVVDEALSCINVLTAGGFCENVVERRPEMNRWSFYHTRGPEE 301

Query: 256 ----PIDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                +DY ++ +                   +       + +           + SDHC
Sbjct: 302 RHLCQLDYILLSKGLAASNATAVPDIIRNGQPWRTIFPPGQEVDRFPRAGWDRPKASDHC 361

Query: 297 PISIDYD 303
           P++I  D
Sbjct: 362 PVAITLD 368


>gi|313610961|gb|EFR85889.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL F2-208]
          Length = 273

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 75/285 (26%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +   
Sbjct: 19  FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMLDMK 71

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + W  F             +    ++      +         P + +  S +    R
Sbjct: 72  AMLD-WDYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAM-FPR 129

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     + +GK+ ++ + HL                       A  L           
Sbjct: 130 ICVWGEFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAKD 176

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259
            P +I GDFN + N    N    K  D      +  K      +    LR       IDY
Sbjct: 177 SPVIILGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPTGSFHDFHPLRPENELEKIDY 236

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +            F    Y     +  G   SDH P++ + D+
Sbjct: 237 IFVSNE---------FQVSTYETIVDEVEGFSASDHFPVTANLDW 272


>gi|258653319|ref|YP_003202475.1| exodeoxyribonuclease III Xth [Nakamurella multipartita DSM 44233]
 gi|258556544|gb|ACV79486.1| exodeoxyribonuclease III Xth [Nakamurella multipartita DSM 44233]
          Length = 264

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 83/304 (27%), Gaps = 68/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   + +  +  + +  D D++ +QE    +A    
Sbjct: 1   MRIATWNIN----------------SIRARHDRVLAWLERSDVDVLAIQETKIDDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      +   + +       +    +A+  +      Q    +G  D  +   + 
Sbjct: 41  ------RFPVESFERLGYRVAHHGTNQWNGVAIASRVGLDDVQ----VGVPDLPAFGEDP 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ES 201
                 +      + V  +++ +   +D     Y             L+D+  ++   E 
Sbjct: 91  AVEARSLGALCGGVRVWSLYVPNGRAVDDPHYHYK------LHWLAVLRDYAAKQLADEP 144

Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            +P ++ GDFN                           +  +                  
Sbjct: 145 HLPMLLCGDFNIAPTDDDIWSVEYYQGSTHVTGPERQAFANLTDAGFTDVVRPFHPGPGV 204

Query: 247 ANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +        + ID+ +        +            D  + +GK  SDH P+
Sbjct: 205 YTYWDYTRLSFPKRRGMRIDFALASPALAARVTDAQI-------DREERKGKGSSDHAPV 257

Query: 299 SIDY 302
            +++
Sbjct: 258 IVEF 261


>gi|170739969|ref|YP_001768624.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
 gi|168194243|gb|ACA16190.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
          Length = 1795

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/341 (10%), Positives = 82/341 (24%), Gaps = 77/341 (22%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLD-ADIVFLQEMGSYN 78
            A  + + S+N   L   +G            + +  +  +    L+  D++ LQE+   +
Sbjct: 1001 ADHLLVASYNAENLDPTDGA-----------ARFAAIASEVLGRLNTPDVIALQEVQDDD 1049

Query: 79   A--------------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                                   +      +    +     + +  +   +I TA   R 
Sbjct: 1050 GPGNTASTVTSAGRTFRLVVEAIRAAGGPDYAFIDNPYIGDDTNGGEPGGNIRTAFLYRT 1109

Query: 119  KNVRVLQQSYPLLGAKDSFSRAGN---------------RRAVELLVEINGKKIWVLDIH 163
              V +   +   +    S   AG                R  +      N + + V+  H
Sbjct: 1110 DRVSLAPNAVRSIAPDGSPITAGPSADQQTNPDNPFYASRPPLAADFVFNDETVTVVSNH 1169

Query: 164  LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK------KESLVPFVIAGDFNRKINY 217
              S     +L  +  P               +                ++AGD N     
Sbjct: 1170 FTSKGGSGALFGSEQPPFDAGQLARAAQAQAVNSFVDGILAASPRARVLVAGDLNDFGFE 1229

Query: 218  LGN----NDDFWKTIDPNDSLIRFPKE------------KDSRCNANKNLRNKIPIDYFV 261
                    +          + + F +              + +        N   +D+ +
Sbjct: 1230 EPLSVLKGEATLAGYTRAGTGVTFTRGGTAVLSDLQDTLPEGQRYDYVFEGNSETLDHVL 1289

Query: 262  MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +       +  E                 + SDH P+    
Sbjct: 1290 VTDALAAGVQFEPVHI-------NADFFDQTSDHDPLLARL 1323


>gi|330961652|gb|EGH61912.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 379

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 45/342 (13%), Positives = 96/342 (28%), Gaps = 76/342 (22%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C  +V        Q +++++WNI  L+                  + + +    +
Sbjct: 52  LLAATCNPAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDIADGSGPDDRPTPEDLAYN 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   +  ++P +T   ++  E + 
Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQLKLLEERLIDLYPCSTQAFYWKAEFVP 171

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157
           N     S      A   R       +   P+  A     +   R A+ +      +G K+
Sbjct: 172 NPHIWGS-VGRKLATLSRFHIDSAERLQLPVPDANLISRQFQPRNALLVSYLPLRDGGKL 230

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-- 215
            V++  L +     +             +Q    +  + + +    P++I GDFN     
Sbjct: 231 AVINTSLTTAKRDGAA-----------QKQIAATETLLDKLEGGGTPWLIGGDFNLLPLG 279

Query: 216 --------------NYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNL--RNKIPI 257
                              +  +  +  I  N       + K      N +        +
Sbjct: 280 QYQRLPEPQRLGYAADSELHKLWEKYPMIPSNAESSGIDRSKWLTRFPNDSRINGPDRTV 339

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           DY        +     S      +          +SDH P+ 
Sbjct: 340 DYLFYSPALKR----VSARVRRDDTLL-------ISDHLPVI 370


>gi|294139368|ref|YP_003555346.1| hypothetical protein SVI_0597 [Shewanella violacea DSS12]
 gi|293325837|dbj|BAJ00568.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 365

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/362 (10%), Positives = 92/362 (25%), Gaps = 73/362 (20%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIV 69
           ++   +    ++++ S+N+             +   + ++       + +Y      D++
Sbjct: 1   MLSTHSDSHYQLKIASFNLFNFIAPPDAFYEFDNIYTQEQWQKKLDWITKYLNEHQPDVI 60

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQ 126
             QE+ S + +  +        ++              +    A+A R      V V   
Sbjct: 61  GFQEVFSPDELQSLTKSCGLD-YFCVLDSPQVMDDFIYSKPVVALASRYPIKQAVSVNAD 119

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIW---VLDIHLKSFCFL---------DSLE 174
                          +R+ +   VE+    +    V+    K   F              
Sbjct: 120 PGWAAKMGLESEFEFSRKPLRATVELPKLGLCDCYVVHFKSKRTLFDVQQSKAGSYTGSV 179

Query: 175 NTYSPSCSLLSQQA---QWLKDW-----------------ITQKKESLVPFVIAGDFNRK 214
              S +  L   Q    + L  W                 + ++ ++  P ++ GDFN  
Sbjct: 180 KETSSAAELNIGQLLAVEALGQWGSSIQRGSEAALLRYAMVERRSQTQNPMILMGDFNDI 239

Query: 215 INYL--------------------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           ++                             +   F++  D  D           +    
Sbjct: 240 LSDGVLAALTSVDTRIKPQTVIGQGAMGDVAHQLGFYRLQDAYDLYQASQYSLSEQARPA 299

Query: 249 KNLRN--KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSDHCPISI 300
            +        +DY ++                 Y   D            + +DH P+ I
Sbjct: 300 THYFFAKGSVLDYILLSSEFDAKNDLSLAEVGRYETYDRHLINPSFEHDSQSTDHAPVMI 359

Query: 301 DY 302
             
Sbjct: 360 SL 361


>gi|167587042|ref|ZP_02379430.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu]
          Length = 284

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 46/305 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +RL+ WNI    + +GV     +          +       D D++ LQE+         
Sbjct: 1   MRLIDWNIQWGRDADGVVDLPRT----------IAAARGLGDFDVLCLQEVTRGFGALAG 50

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +  A++                               A+  +          L   
Sbjct: 51  HPEPDQFAELAALLPGFTVVEAIGADLPPTAPGAPRRQFGNAIASRLPVGRVMRRLLPWP 110

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSCSLLSQQ 187
            D  + +  R A+E+ +      + V   HL+ +        +D+L + +  +C+   + 
Sbjct: 111 ADDAAPSMPRVALEVELATASGPLRVTTTHLEYYSARQRLAQVDALHDRHREACAHADRP 170

Query: 188 AQW-LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEK 241
           A+    D            ++ GDFN   +                     + +      
Sbjct: 171 ARAEHADSPFSATAQPRDAIVCGDFNSAYDSDAYRRFLEPVEGAPRFVDAWAALHPGAAP 230

Query: 242 DSRCNAN---KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                     +     +  D+  +       + +                  R SDH PI
Sbjct: 231 PPTAGIYDTVQWSEGPLACDFVFVTDTLLPRVARCEI-----------DGDLRASDHQPI 279

Query: 299 SIDYD 303
            ++ +
Sbjct: 280 VLELN 284


>gi|29832889|ref|NP_827523.1| large secreted protein [Streptomyces avermitilis MA-4680]
 gi|29610010|dbj|BAC74058.1| putative large secreted protein [Streptomyces avermitilis MA-4680]
          Length = 608

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 84/326 (25%), Gaps = 66/326 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ + ++N+  L   +                  +    ++   DIV L+E+   N   
Sbjct: 302 GELAVATYNVENLDPSDATFAD---------HAAAIVNNLQS--PDIVSLEEIQDNNGAT 350

Query: 82  K-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
                             V        + S + + +    +   +I          V   
Sbjct: 351 DDGTVAADQTVRKLIDAIVAAGGPAYEWRSIDPVNDKDGGEPGGNIRQVFLFNPDRVSFT 410

Query: 125 QQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
            ++                      P        +   +R+ +       G+ ++V+  H
Sbjct: 411 DRAGGDSTTAVGVTKVRGKAQLTVSPGRIDPSDAAWNSSRKPLAGEFVFRGRTVFVIANH 470

Query: 164 LKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINY 217
             S      L   Y P    S +    QA  +  ++    +       +  GD N     
Sbjct: 471 FASKGGDQGLAAQYQPPARSSETQRHLQATAVNAFVKDVLDTQKNADVIALGDMNDF--- 527

Query: 218 LGNNDDFWKTIDPNDSLIRFPKE-KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                D  K ++ +  L    K    S         N   +D  ++  +           
Sbjct: 528 --EFSDTAKILEGDGELWSAIKSLPKSERYTYDYQGNSQVLDQILVSPSIR-----RGCD 580

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
               +         ++SDH P  + +
Sbjct: 581 VDYDSVHLNSEFSDQVSDHDPQVLRF 606


>gi|32471949|ref|NP_864943.1| hypothetical protein RB2435 [Rhodopirellula baltica SH 1]
 gi|32397321|emb|CAD72627.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 358

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/346 (11%), Positives = 93/346 (26%), Gaps = 45/346 (13%)

Query: 1   MIRKYVLALVFFLVPCT-----ASVAQKVRLVSWNINTLSEQEGVSLWK--------NSV 47
           M   ++LAL    +        A    +  +++WN+    + +               S 
Sbjct: 11  MRLLFLLALTGHFISGFGSVAIAQQPTEFSVMTWNLEWFFDNQTADNPSELGREKSAPSR 70

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
            +       +      +   +V LQE+ S N    +            +  +     D  
Sbjct: 71  GQWDWRRDRVAAAIAKVQPTVVALQEIESQNVTYFLTRAIDRNHGLKYDDYV-IKGEDFY 129

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS 166
            +   A+               +  +  S   A   + +  +VEI    K  +L I    
Sbjct: 130 TEQDVALLATTTTGVQSISRGVVTPSMKSRGYASVSKHLFAVVEIPVNGKTELLVIANCH 189

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWIT---QKKESLVPFVIAGDFNRKI------NY 217
              +    +  +     L    + L   +    +  +  V  ++ GDFN +         
Sbjct: 190 LRAMAKKGDLRAKQARTLGLWLERLVAGVKASQENPDQPVHVLVTGDFNTEELAGKISPD 249

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA---YKFLIQES 274
                   +  D     +    +     N   +L      D  ++ ++       ++  S
Sbjct: 250 SDLGVLMSRGNDDPSDDLVDLHDYIPDQNRTTHLLPGRQFDRILVSRDLVIDTPGVVDLS 309

Query: 275 FSEILYNEDDIK------------------SRGKRLSDHCPISIDY 302
             ++    D                        + +SDH P+   +
Sbjct: 310 LRDVTVRSDLNFGGDQDTQDEHWNNYWGIADDQRDISDHNPVLARF 355


>gi|290959609|ref|YP_003490791.1| hypothetical protein SCAB_52121 [Streptomyces scabiei 87.22]
 gi|260649135|emb|CBG72249.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 295

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 82/306 (26%), Gaps = 56/306 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------- 76
           +R+V+WN+                         +    + L  D V LQE+         
Sbjct: 1   MRVVTWNLWWRFGP------------WQERQKAILAVLRELRPDAVGLQEVWQRGGGTGR 48

Query: 77  -----YNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                 N    +  +      +          +R  ++D+    AV  +     + +  L
Sbjct: 49  DGGGGDNLAGWLAGELGMHWAWGEYGDAGRWQRRIGDSDVGIGGAVLSRWPVRERDAIAL 108

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                       R A+  L++  G  +     HL S           + + ++  +Q   
Sbjct: 109 PAGDGGS----TRGALYALLDAPGAPVPFFTAHLSS----------ATDASAVRCRQVTA 154

Query: 191 LKDWITQKK-ESLVPFVIAGDFNRKINYLG-------------NNDDFWKTIDPNDSLIR 236
           L  ++ + +     P VI GDFN   +                    F+   +  +    
Sbjct: 155 LAGFVARHRGGHAHPSVITGDFNAWPDSDEVRLFGGYRTAPAVPGQCFFDAWEYAEPGAP 214

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                 +      +    + +DY  +                +    +    G   SDH 
Sbjct: 215 SATWDLANPYVAGSFGPSVRVDYIHV---GPPGPGGLGHVRAVRRAGEGPVGGVWPSDHL 271

Query: 297 PISIDY 302
            +  D 
Sbjct: 272 AVVADL 277


>gi|254420582|ref|ZP_05034306.1| exodeoxyribonuclease III (xth) subfamily [Brevundimonas sp. BAL3]
 gi|196186759|gb|EDX81735.1| exodeoxyribonuclease III (xth) subfamily [Brevundimonas sp. BAL3]
          Length = 265

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 78/307 (25%), Gaps = 70/307 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +RL +WNIN                        + ++      D++ LQE+        
Sbjct: 2   TLRLATWNIN----------------SVRLRIDQVARFVAERAPDVLLLQEIKCTTD--- 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      + E +     R +       +A+  +       ++ +     +      
Sbjct: 43  ------QFPRAAFEDMGMPHLRVAGQKGWHGVAIASRLPLEDSDTFQVCKLGHARC---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  V      I V + ++ +    D  + T +P         + L   + ++ +  
Sbjct: 93  -------VSAQVAGIDVQNFYIPAG--GDVPDRTLNPKFDHKMDFYEQLTAIVARQ-DKS 142

Query: 203 VPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCN 246
            P V+AGDFN         +                   +                    
Sbjct: 143 RPLVMAGDFNIAPGEGDVFNHRYMSKIVSHTPIEVETLNRLQATGGFADVLRDRFPEPQK 202

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+          + +++         D      R SDH 
Sbjct: 203 LASWWSYRAADFRKSNRGLRLDHIWTSPGLTPAVAKDTAR-----IHDDVREWDRPSDHA 257

Query: 297 PISIDYD 303
           P+++D D
Sbjct: 258 PVTVDLD 264


>gi|317401442|gb|EFV82074.1| hypothetical protein HMPREF0005_00913 [Achromobacter xylosoxidans
           C54]
          Length = 288

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 89/324 (27%), Gaps = 85/324 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+NI+             S          LR     L  D+VFLQE+   N    +
Sbjct: 4   IRVVSYNIH----------KGRSALGRRDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSL 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  + +  + + +    ++     A+  +   +  +         S  R   R
Sbjct: 54  LDAQHESLAAALKLDVAYGRNAIRHETDHGNALLSRFPILDHE-----NQDISDHRLEQR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +E++G+ +    +HL  F                 S+Q   L + I +      
Sbjct: 109 GLLHATIELDGRSVHCFVVHLGLFAGS-------------RSRQILALTERIRRMVPDGE 155

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243
           P +IAGDFN   + L     F + +   +     P+                        
Sbjct: 156 PILIAGDFNDWGDRLAP--LFVQQLGLYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLP 213

Query: 244 ------------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                                          +     +D         +     S   + 
Sbjct: 214 NSGVSVLERTNQLGMDGSSRLLLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR 268

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
                      RLSDH P+  + +
Sbjct: 269 ------GREWARLSDHSPLLAELE 286


>gi|224538615|ref|ZP_03679154.1| hypothetical protein BACCELL_03509 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519749|gb|EEF88854.1| hypothetical protein BACCELL_03509 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 335

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/341 (9%), Positives = 85/341 (24%), Gaps = 57/341 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46
           M +   L  ++  V    +   +     +  +N+  L +    +   +           +
Sbjct: 1   MKKLLFLISLWLCVTTAGAQQNERDLYSVAFYNLENLFDTIHDAGKNDLEFLPSGSYAWT 60

Query: 47  VKRTTSDYTLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
            ++  +    L +               ++ + E  +   +  +  +     +       
Sbjct: 61  AEKYEAKLKNLAKVLSEVSRDRVPEGPAVIGVAEAENNRVLTDLVSQPAISNYKFVHYEG 120

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
              +      I  A+    +   V      L    +  +    R  + +  ++ G+++  
Sbjct: 121 PDKR-----GIDCALLYDPEQFTVTNSKLVLSTPFEGDTVHLTRGFLIVDGQMAGERVCF 175

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S           SP     ++Q + L D + +  +  +  ++ GD N       
Sbjct: 176 IVNHWPSR-------GAKSPVRVHAAKQVRALTDSLMRT-DKKLKLIVMGDMNDDPMDES 227

Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------ 268
                      +          +   +D               D  V+ +   K      
Sbjct: 228 MATLGARKYAKQVKKGEFYNPWWETLEDKGVGTLLYRGKWNLFDQIVVSRPLLKAKKGLK 287

Query: 269 ------------FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                       F     +          +      SDH P
Sbjct: 288 YDHNEVFIREYLFQQDGKYKGSPLRTHGGRVWLNGYSDHLP 328


>gi|58617116|ref|YP_196315.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Gardel]
 gi|58416728|emb|CAI27841.1| Exodeoxyribonuclease III [Ehrlichia ruminantium str. Gardel]
          Length = 278

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 90/316 (28%), Gaps = 76/316 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  +  + + DI  LQE+   N     
Sbjct: 2   LRIATWNVN----------------SIRKRIDHLCTWLTDYNIDIALLQEIKCTND---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----------- 132
                        + + ++           +A+  K   V +    +             
Sbjct: 42  ------QFPALEIKSLGYNYYVHGQKARNGVAIITKYPIVEEVVTNIFSLYGTSNVCCEL 95

Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                +++   +R  +E ++  NG KI V  I++ +   ++S       +          
Sbjct: 96  GSEDFTYNCEESRY-LECVILYNGIKIRVGSIYVPNGQSVES------DAFQYKLGFFDQ 148

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLI 235
           LK++++   +     ++ GD+N     +                   + +++I       
Sbjct: 149 LKEYMSFLLKKEEICILGGDYNVAPYPIDMYSYEIMNGKLCCHQFEREKFRSIINTGFFD 208

Query: 236 RFP---KEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            F     +K      N    +        ID  ++   A   +      +          
Sbjct: 209 AFRLLNDDKKQFTWWNYKFGSWQENKGLRIDMLLLSPQAMDKVSSCVVHDE-------LR 261

Query: 288 RGKRLSDHCPISIDYD 303
                SDH P+  D +
Sbjct: 262 GLNVPSDHVPVVCDLN 277


>gi|154688190|ref|YP_001423351.1| ExoA [Bacillus amyloliquefaciens FZB42]
 gi|154354041|gb|ABS76120.1| ExoA [Bacillus amyloliquefaciens FZB42]
          Length = 252

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 83/304 (27%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L              R       +  Y +   ADI+ LQE    +    +
Sbjct: 1   MKLISWNVNGL--------------RAVMKKIDINTYVQETAADILCLQETKVQDGQVSL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +++      +S     +                +  + L G          R
Sbjct: 47  QPE-GYHAYWNYAVKKGYSGTAVFSK--------------EKPLHVLYGLGIDDHDQEGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  + ++V++ +  +        +      +      Q L        +   
Sbjct: 92  -----VITLEFEHVFVVNCYTPNAKRGLERIDYRLQWEADFKDYLQKL--------DRKK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + +  +        F      +  A 
Sbjct: 139 PVILCGDLNVAHREIDLKNPKANRKNAGFSEQEREAFSALLNAGFTDSFRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DY ++     + + Q +                  SDHCP+ 
Sbjct: 199 SWWSYRTNAREKNIGWRLDYVIVSDRLKQRISQAAIC-----------ADIMGSDHCPVE 247

Query: 300 IDYD 303
           +  D
Sbjct: 248 MTVD 251


>gi|58697046|ref|ZP_00372507.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225630665|ref|YP_002727456.1| exodeoxyribonuclease III [Wolbachia sp. wRi]
 gi|58536687|gb|EAL59975.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225592646|gb|ACN95665.1| exodeoxyribonuclease III [Wolbachia sp. wRi]
          Length = 259

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 85/305 (27%), Gaps = 72/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                        L  +  +   DIV LQE+         
Sbjct: 2   LKIATWNVN----------------SIRKRVNQLCSFIVDSQIDIVLLQEIKCTEE---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y+    + +            + V  K   + +    ++            
Sbjct: 42  ------QFPYAEIEKLGYEYAIYGQVARNGVCVLSKYPILEKFKIDIVEGYQEARY---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +++ N +K+ V  +++ +    DS       +     +    L + ++   ++  
Sbjct: 92  --IECIIKHNNQKVRVGSVYVPNGQSPDS------QAFEYKLKFFDNLYERMSTLLKNEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFPKEKDSRCNA 247
             +IAGD+N   + +   D     ++                 N       +        
Sbjct: 144 LTIIAGDYNVAPDEIDVFD--SNLLNGQVCFHIREREKLRAILNLGFKDAFRISHPNLQQ 201

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + IDY ++   A   L            DD   + +  SDH P+
Sbjct: 202 FTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYI-------DDRLRKLENPSDHTPV 254

Query: 299 SIDYD 303
               +
Sbjct: 255 VCAIE 259


>gi|302556768|ref|ZP_07309110.1| secreted protein [Streptomyces griseoflavus Tu4000]
 gi|302474386|gb|EFL37479.1| secreted protein [Streptomyces griseoflavus Tu4000]
          Length = 295

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 86/292 (29%), Gaps = 61/292 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
            +R+ ++NI+  + ++ V            D        + L AD++ LQE+  +     
Sbjct: 48  PLRVATYNIHAGAGEDQVF-----------DLDRTAAAIRGLRADVIGLQEVDVHWGARS 96

Query: 80  -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   +  +    +F++    ++ +           +AV  ++  +  +++ +    
Sbjct: 97  DFADEARALADRLGMRVFFAPIYDLDPA-TADGERRQYGVAVLSRHPVLAAENHEITRLS 155

Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              S      A    E++V + G ++ V   HL            Y    S+   Q   +
Sbjct: 156 TQSSDPVPAPAPGFAEVVVGVRGARVHVYTTHL-----------DYRADPSVRESQVADM 204

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + +   +    P V+ GDFN +          W  +                       
Sbjct: 205 LEVLATDRG---PKVLVGDFNAEAT-APELSPLWGRLRDAAPAAGPTYPAAEPVK----- 255

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID   +                     D ++     SDH P+  D  
Sbjct: 256 ----RIDLITVSPGIGVR--------------DARTVATEASDHRPVVADLT 289


>gi|282881078|ref|ZP_06289765.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281304882|gb|EFA96955.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 290

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 85/287 (29%), Gaps = 45/287 (15%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76
            +  +R++++N        G   + +       +          L  D+V +QE+ S   
Sbjct: 42  SSGDIRIMTYNSFYCKANNGTPTFSD------ENTHRFASVIGALAPDVVAIQELDSSCV 95

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +     +  + +       E     +       I   + V++       +  PL G    
Sbjct: 96  HRNKRYLLEEISKYTGIDYELFFGSAANFDGGRIGCGLLVKRSMQVDDVKFTPLPGD--- 152

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +E        K  V   H+      D        S  L++ +A+       
Sbjct: 153 ----EPRMLIEAKFP----KFTVFATHM------DLNPMNRKESAKLINNKAK------- 191

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
              +S+VP  + GD N    +      F + +     +                 +  + 
Sbjct: 192 ---KSVVPLFLIGDLNDSPTWKPEQSAFPELMQKFKIVSDASGSLPE--------QPGVT 240

Query: 257 IDYFVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           IDY ++ Q   + + +  +      +    +      SDH P+  D 
Sbjct: 241 IDYVLLGQQHAEKIAVTGTHVVRRLSVKGEQLDLSTASDHYPVFADI 287


>gi|28871801|ref|NP_794420.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28855053|gb|AAO58115.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 363

 Score = 89.6 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 101/342 (29%), Gaps = 75/342 (21%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C+ +V        Q +++++WNI  L+                  + + +    +
Sbjct: 35  LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 94

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   +A ++P +T   ++  E + 
Sbjct: 95  LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 154

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157
           +     S          R       +   P+  A     +   + A+ +      +G K+
Sbjct: 155 SPHIWGS-VGRKLTTLSRFHIDSAERLQLPMPDANIISRQFQPKNALLVSYLPLRDGGKL 213

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-- 215
            V++ HL +    D              +Q    +  +++ +    P++I GDFN     
Sbjct: 214 AVINTHLATAKPGDG----------TAQKQIASTETLLSKLEGGGTPWLIGGDFNLLPLG 263

Query: 216 ----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPI------- 257
                     +    + +     +    +    +   +  +    +  N   I       
Sbjct: 264 QYQRLPEQQRHGYAADSELHALWEKYPMIPNNTESSGTDRSQWLTHFPNDNRINGPDRTV 323

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           DY     +  +     S      +          +SDH P+ 
Sbjct: 324 DYLFYSPSLKR----VSARVRRDDTLL-------ISDHLPVI 354


>gi|260947104|ref|XP_002617849.1| hypothetical protein CLUG_01308 [Clavispora lusitaniae ATCC 42720]
 gi|238847721|gb|EEQ37185.1| hypothetical protein CLUG_01308 [Clavispora lusitaniae ATCC 42720]
          Length = 807

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 88/325 (27%), Gaps = 43/325 (13%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    L+S+N      +  +      +           L++     + D++ LQE+ +  
Sbjct: 455 SDTFTLMSYNTLCQHYATTKLYKYTPSWALEWEFRRNSLKEEILRYNTDLICLQEVETRT 514

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLG-- 132
                 P      +       + SK  S ++       A   R    +++Q+ +      
Sbjct: 515 YHEFWLPIMESAGYNGFFFCKSRSKTMSESESKKVDGCATFFRASKFQLIQKQHLEYNTV 574

Query: 133 ---------AKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLENTYS 178
                     KD F+R  N+        L     G+KI +++ HL     F D       
Sbjct: 575 CMGSDRYKKTKDLFNRFMNKDNIALITYLQHIETGEKIVLVNTHLHWDPAFNDVKALQVG 634

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IR 236
                L    +  +   +         +I GDFN   +           +  +  L    
Sbjct: 635 ILLEELQSMMKKFQHTNSVDDIKNSSLIICGDFNSTKSSAVYQLFSTGAVSKHGDLEGKD 694

Query: 237 FPKEKDSRCN------------------ANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
           + +  D   +                   N        IDY            +     E
Sbjct: 695 YGRFTDEGFHHNFKLKSAYDSIASDFPFTNFTPTFTEVIDYVWYSTNTLQVKGLLGKPDE 754

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
             Y+           SDH P+   +
Sbjct: 755 EYYSHHVGFPNAHFPSDHIPLVTKF 779


>gi|164687865|ref|ZP_02211893.1| hypothetical protein CLOBAR_01509 [Clostridium bartlettii DSM
           16795]
 gi|164603140|gb|EDQ96605.1| hypothetical protein CLOBAR_01509 [Clostridium bartlettii DSM
           16795]
          Length = 240

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 90/301 (29%), Gaps = 68/301 (22%)

Query: 9   LVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           ++  +     +          ++++S+NI++ +++       ++             + K
Sbjct: 1   MIILIASFLGTSQDKNTEKIDIKIISYNIHSGTDKNMAPTLFDT-----------INFLK 49

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
             +ADI+ LQE+   + V          +  +     N       N+ +  +A   K   
Sbjct: 50  KSNADIICLQEVNESSKVGFQVSSLKEELNMNLHFGAN----VVKNNTNYGLATYSKYKI 105

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           + Q+   L   +        R  +   V +  KK+ +++IHL                  
Sbjct: 106 ISQKHVYLSSTR------EQRGFLHTTVRVKDKKLHIINIHLGLG-------------DK 146

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              +Q   L+++I         FV+ GDFN               +D    +    K   
Sbjct: 147 ERKKQINELQNYIKGL--KKDYFVVLGDFNEGNLS----------LDDEIIIDVAEKLNK 194

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           S             IDY  +  N      +     +              SDH PI    
Sbjct: 195 SNILTFSTEL--DRIDYMFVSNNIEVKSYEVLIKNM--------------SDHYPIVAKI 238

Query: 303 D 303
            
Sbjct: 239 S 239


>gi|145516224|ref|XP_001444006.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411406|emb|CAK76609.1| unnamed protein product [Paramecium tetraurelia]
          Length = 347

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/287 (11%), Positives = 86/287 (29%), Gaps = 37/287 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            ++++++++NI    +++G + W +          ++ +  + ++ +I  LQE+ ++   
Sbjct: 89  TEQLKVMTFNIRYDCKEDGKNDWNHRKS-------VVYKLIRKINPEIFGLQEVLAHQQA 141

Query: 81  AKVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    +       +                     +         P +    S+  
Sbjct: 142 DLQSNLQGNYNFIGRGRQNNFWDDEGCPIYYDMLKYNIVQAEVFWFSDTPYVAGSKSYGN 201

Query: 140 AGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              R    + +  +++ K   V + H                +     + A+ +K  I Q
Sbjct: 202 GFPRICTYVKLLHKMSQKVFHVYNTHFDH------------ENKLSQIKSAEQIKRHIQQ 249

Query: 198 KKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                   ++ GD N               W+     +++        +  +A   L+  
Sbjct: 250 YCSPEDKIIVMGDLNSLPMSDAVKILTSPIWQGFTLQNTMGVL-DMPLATMHAWYGLKLG 308

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP-ISI 300
           + IDY  +           +         +    G+  SDH P + +
Sbjct: 309 LHIDYIFL----------GNLKYKSMMIVNDLIDGQYPSDHFPKVVV 345


>gi|302383762|ref|YP_003819585.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
 gi|302194390|gb|ADL01962.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
          Length = 264

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 65/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    + Q+ +    D+V  QE+ + +     
Sbjct: 1   MRIATWNVN----------------SVNARLPTVLQWLEAAVPDVVCFQEIKTVDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++        +  +A+  K      +         +       
Sbjct: 41  ------KFPREAFESLGYNVEVHGQKSYNGVALLSKYPVSDVRRGLPGSDLLAEGEDDQA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +E L+E   + I V  ++L +   + + +  Y        +    L         +  
Sbjct: 95  RYIEALIEAP-RPIRVGGLYLPNGNPIGTGKFDYK------LRWMGRLNAHARDLLANEE 147

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            F + GD+N                   +   +   ++ +                    
Sbjct: 148 AFTLCGDYNVIPTPDDAKTPSAWVTDALFQPESRAAFRALKGLGLYEAGELGNQPP-GTY 206

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++   A    +                   + SDH P+ 
Sbjct: 207 TFWDYQAGAWQRDHGIRIDFHLLSPQAADRFVGV-------ETHRDARDMDKPSDHVPVV 259

Query: 300 IDY 302
           I+ 
Sbjct: 260 IEL 262


>gi|79605875|ref|NP_973943.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|332193243|gb|AEE31364.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana]
          Length = 358

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 87/324 (26%), Gaps = 46/324 (14%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            RLVS+NI      +   +     +  +  +    +    KNL AD   LQE+  Y++  
Sbjct: 33  FRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYDSFY 92

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    +        +R     +         + A      R+           DS S + 
Sbjct: 93  RNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCSE 152

Query: 142 NRR----------------------------AVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            +                              +     IN     ++ +      +   L
Sbjct: 153 QKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLYWDPEL 212

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------LGNNDD 223
            +        L  +    K  I+ + E     ++AGDFN                   + 
Sbjct: 213 ADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYLVSGNAKPTET 272

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--- 280
             +   P      +   +      N        +DY  +  +   F+   S  ++     
Sbjct: 273 IEEEEAPVPLSSVYEVTRGEPKFTNCTPGFTNTLDYIFISPS--DFIKPVSILQLPEPDS 330

Query: 281 -NEDDIKSRGKRLSDHCPISIDYD 303
            +           SDH PI  +++
Sbjct: 331 PDVVGFLPNHHHPSDHLPIGAEFE 354


>gi|302343712|ref|YP_003808241.1| exodeoxyribonuclease III [Desulfarculus baarsii DSM 2075]
 gi|301640325|gb|ADK85647.1| exodeoxyribonuclease III [Desulfarculus baarsii DSM 2075]
          Length = 259

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 79/306 (25%), Gaps = 78/306 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
            + S+N+N L                 +   +L  +  +   D V LQE  +   +   +
Sbjct: 4   TIASFNVNGL----------------RARLGILGDWLAHNQPDAVCLQETKVQDQDFPRQ 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +  + + +                 +  +A+  K            G  + +     
Sbjct: 48  AVEELGYHVAFH------------GQKSYNGVAILSKRP----ADEHGHGFGELWDDDQA 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +   ++     +WV++++             Y             L+ W+  +    
Sbjct: 92  R-LLWAKLD----GLWVINVYAPQGRDPSDPAFAYKLEFFRR------LRAWLEARFSPG 140

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
              V  GDFN     +  +D                 +  +        F +   ++   
Sbjct: 141 EALVCCGDFNVAPQDIDLHDPVKLAGQVGCHPDERAAYANVLDWGLEDVFRRLHPAQ-KQ 199

Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            ID+ +          Q          D    R ++ SDH P
Sbjct: 200 FTFWDYRLRGALSRDLGWRIDHILASAGLAPACGQCLV-------DMAPRRLEKPSDHTP 252

Query: 298 ISIDYD 303
           I   + 
Sbjct: 253 ILARFS 258


>gi|254854529|ref|ZP_05243877.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-503]
 gi|258607929|gb|EEW20537.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-503]
          Length = 251

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 84/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y + +DADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGFGVPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +++ ++  +                        + +++    +   
Sbjct: 91  -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|56478194|ref|YP_159783.1| putative endonuclease / exonuclease / phosphatase [Aromatoleum
           aromaticum EbN1]
 gi|56314237|emb|CAI08882.1| conserved hypothetical protein, putative endonuclease / exonuclease
           / phosphatase [Aromatoleum aromaticum EbN1]
          Length = 284

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 78/304 (25%), Gaps = 46/304 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-GSYNAVA 81
           +R+VSWNI      +G             D         ++ DA+++ LQE+  ++  + 
Sbjct: 1   MRIVSWNIQWGRGADG-----------RVDLERTVAAIHDIGDAEVICLQEVAQNFPGLE 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               ++   I  +                            +  +        + L    
Sbjct: 50  GGDCEDEVAILAAAFPGHEAMYGAGIDVPDGAGGRARFGNLMLSRLEVGPVFRHLLPCPA 109

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLSQQAQ 189
           D    A  R  VE +++     + VL  HL+ +         ++        +       
Sbjct: 110 DPGQAAMQRCCVEAVLQAPWGPVRVLTTHLEYYSARQRAAQVAMLRALQKEVAGQVAAGP 169

Query: 190 WLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-------- 239
             ++          P   V  GDFN +                        +        
Sbjct: 170 AGREASPAFAAGRRPVTAVACGDFNCEPGSGAYTLMSADIALHVPPWRDAWRVKHRSRAH 229

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +     +  +        DY  +  +    + Q                    SDH P+ 
Sbjct: 230 DPTVGLHGAEWPGRTYCCDYAWVSDDLAARVAQVEV-----------YAATPASDHQPLV 278

Query: 300 IDYD 303
           ++ +
Sbjct: 279 LELN 282


>gi|268680126|ref|YP_003304557.1| endonuclease/exonuclease/phosphatase [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618157|gb|ACZ12522.1| Endonuclease/exonuclease/phosphatase [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 310

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 86/317 (27%), Gaps = 64/317 (20%)

Query: 23  KVRLVSWNINTLSE-----QEGVSLWKNSVKRT-----TSDYTLLRQYAKNLDADIVFLQ 72
           + ++ ++NI  L +      E      N+               + Q   +++AD++ L 
Sbjct: 16  EFKVATYNIENLFDATKNGNEYKEYSPNTKHGWNEAMVERKIAHIAQVIGDINADVIALA 75

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ +   + ++        +                        R      L   +P+  
Sbjct: 76  EVENKAILERLNNALGAKKYPYLFYPKKKE--------------RVSIESALLSRFPIAQ 121

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
               F +   R    + ++I    + V   H  +          +          A  LK
Sbjct: 122 TDSLFMKDQPRGIHRITLKIEQNLLDVYINHWPA----------HKEKEDERLVYATTLK 171

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI-------DPNDSLIRFPKEKDSRC 245
           + +   KE    F++ GDFN         D     +               +     +  
Sbjct: 172 NSL--LKEKDKAFILLGDFNSPYQVQKE-DWGLGFVTVLGVGDKSAPLYNTWYDLPQNER 228

Query: 246 NANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEILY----------------NEDDI 285
            ++   + K  +D+ V+    Y          S                      +    
Sbjct: 229 YSHSYGKQKTALDHIVIAPTLYDAKGIEYKANSLKRFEAPYMLDVKGNPKRWQISDRGKG 288

Query: 286 KSRGKRLSDHCPISIDY 302
           K  G+  SDH P++  +
Sbjct: 289 KHLGEGYSDHFPVTAIF 305


>gi|86739888|ref|YP_480288.1| exodeoxyribonuclease III [Frankia sp. CcI3]
 gi|86566750|gb|ABD10559.1| Exodeoxyribonuclease III [Frankia sp. CcI3]
          Length = 304

 Score = 89.6 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 75/307 (24%), Gaps = 69/307 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  VR+ +WNIN                   +    L ++    + D+V LQE       
Sbjct: 5   STDVRIATWNIN----------------SAKARQARLIEWLDRAEPDVVCLQE------- 41

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+       +F        +      +     +A+  +    L      L     F   
Sbjct: 42  TKLADDAFLELFDEDLFRRGYRVAHHGDGRWNGVAILSR--DTLDDVARGLPGDPGFPGP 99

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R             I +  +++ +   +D     Y  +          L++ + +   
Sbjct: 100 EPRAIAATC-----GGIRIWSLYVPNGRTIDDPHYAYKLA------WLAALREVVAEATT 148

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                +  GDFN                              +     +    + +    
Sbjct: 149 QGA-VMTLGDFNIAPTDVDVWDITQFEGATHVTPAERAALAELVDAGLIDVL-RARWPDD 206

Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           ID  +   +    +            D    +G   SDH 
Sbjct: 207 VVYTYWDYRQLCFPKNLGMRIDLALATADVAGRVRAVWV-------DRAARKGVGTSDHA 259

Query: 297 PISIDYD 303
           P+ +D D
Sbjct: 260 PVIVDLD 266


>gi|307545625|ref|YP_003898104.1| exonuclease III [Halomonas elongata DSM 2581]
 gi|307217649|emb|CBV42919.1| exonuclease III [Halomonas elongata DSM 2581]
          Length = 277

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 75/314 (23%), Gaps = 74/314 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +RLVS+NIN                   +    L    +     ++ LQE  +      A
Sbjct: 1   MRLVSFNING----------------IRARLHQLEALVERHRPAVIGLQETKVQDSEFPA 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + ++Y                 H  +A+     +  +      G  D    A 
Sbjct: 45  EAVEALGYRVYYH------------GQKGHYGVALMCCREQCPEPELVQRGFPDDEDDAQ 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     L   +G+ + V +       F       +        +    L   + ++   
Sbjct: 93  RRLIGVRLRGADGEPLTVWN-----GYFPQGENIEHPVKFPHKRRFYAQLSSLLKEQHRP 147

Query: 202 LVPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKE 240
                I GDFN                               ++   I        +   
Sbjct: 148 DERLAIMGDFNISPADIDIGIGESNRKRWLREGKTSFQPEEREWLDAIKAWGLSDSYRDR 207

Query: 241 KDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                +       +             IDY +        +            D      
Sbjct: 208 YPEVDDRFSWFDYRSKGFDRDPKRGLRIDYILTTAPLATHIADAGI-------DYDLRGM 260

Query: 290 KRLSDHCPISIDYD 303
           ++ SDH P+  ++D
Sbjct: 261 EKPSDHAPVWTEFD 274


>gi|302865833|ref|YP_003834470.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|302568692|gb|ADL44894.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
          Length = 675

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 85/289 (29%), Gaps = 57/289 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             T   A  VR+ ++NI      +G             D   + +  +   AD+V L E+
Sbjct: 442 ATTTPAA--VRVAAYNIRMGFGLDG-----------RLDVDAVARELR--GADVVLLSEV 486

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                +          +     RL          D     AV  +      Q+  L    
Sbjct: 487 DRGWWL----NGGHDTLALVAGRLGMPYVFAPAADPVWGDAVLSRFPMRSGQTRRLTAHG 542

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                     A+ + +++ G+++ V+  HL+     D              +QA  +  +
Sbjct: 543 APTGAQ----ALGVTLDLGGRELAVVATHLQPPPGRDP------------VEQAGEVAAF 586

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
              +  +  P V+ GD N + +     D  +     +  +             +     +
Sbjct: 587 -AGRYANGRPLVLGGDLNTEPD-----DPAFAEFTRSGLVDAL--AAARPLRTSPADDPR 638

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ID+  +        ++   +E               SDH P+++   
Sbjct: 639 TQIDHVFVSPGLTATEVRAPRTE--------------ASDHLPVTLTVT 673


>gi|255011538|ref|ZP_05283664.1| hypothetical protein Bfra3_20505 [Bacteroides fragilis 3_1_12]
 gi|313149364|ref|ZP_07811557.1| metallophosphoesterase [Bacteroides fragilis 3_1_12]
 gi|313138131|gb|EFR55491.1| metallophosphoesterase [Bacteroides fragilis 3_1_12]
          Length = 608

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 83/300 (27%), Gaps = 57/300 (19%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K VL L   L   +A     +RL+++N+      +              +Y  +    
Sbjct: 1   MKKLVLLLFSALFVLSAQAGDVLRLMTYNVRNARGMDNSC-----------NYQRVANVI 49

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            N   D+V +QE+ S  A +         +   T+     +     +     I +  K  
Sbjct: 50  NNARPDVVAVQELDSMTARSNGTDVLR-ELAERTQLHPYFAPAIDYDGGKYGIGLLAKEA 108

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            +  Q++ L G      R   R  +                     C   SL        
Sbjct: 109 PLRLQTFALPG------REEARTLIVAEF-----------PEYIFGCTHLSLTEEDR--- 148

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                  + L+   +    +  PF +AGDFN         +             +     
Sbjct: 149 ------MKSLEILKSVAVSAEKPFFLAGDFNSDAGSGFIKELKNTF--------QVLSNP 194

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                       K  +DY +  +      +  S   I              SDH P+ ++
Sbjct: 195 KQPTYPAS--EPKETLDYLIALKQEKPTFVVSSARVI---------DEPLASDHRPLLVE 243


>gi|221212763|ref|ZP_03585739.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD1]
 gi|221166976|gb|EED99446.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD1]
          Length = 285

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 50/306 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +R++ WNI    + +GV   + +          +    +  D D++ +QE+         
Sbjct: 1   MRVIDWNIQWGRDADGVVDLRRT----------IAAARQLADFDVLCVQEITRGFDALPG 50

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +  A++                    +          A+  +          L   
Sbjct: 51  HPGVDQFAELAALLPGYTVVEAIGADLPPAQPGAPRRQFGNAIATRLPVGRVLRQLLPWP 110

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            D+ + +  R A+++ +      + V+  HL+ +   +        +     ++A    D
Sbjct: 111 ADADAPSMPRVALDVELLTASGPLRVVTTHLEFYS--ERQRLAQVDAIRARHREACAHAD 168

Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                +    PF         ++ GDFN   +                 +  +  +   R
Sbjct: 169 RPAPAENDTGPFVATAQSRDAILCGDFNSAFDSAAYRRMLEPIDGAPAFVDAWIAQHPGR 228

Query: 245 C--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                    +  +     +  D+  +       L +                  R SDH 
Sbjct: 229 TPPPTAGVYDTAQWSDGPLACDFAFVTDTLLPRLARCEI-----------DGAVRASDHQ 277

Query: 297 PISIDY 302
           PI ++ 
Sbjct: 278 PIVLEL 283


>gi|251791412|ref|YP_003006133.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591]
 gi|247540033|gb|ACT08654.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591]
          Length = 380

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 83/291 (28%), Gaps = 31/291 (10%)

Query: 33  TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92
            L E    +      +R  +         K L ADI+   E+ +   +     +      
Sbjct: 99  WLGELVFRAEPFGDQQRQNTGL-----VIKALKADILCAVEVENMAVLRDFNQQILADHA 153

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
           ++   +I+         I  A   R +  ++      +  A  SF+   +R  +E+ +++
Sbjct: 154 FAQYVMIDSPN--DPRGIDVACLTRHRITQL---RTHIFDASGSFTPLFSRDCLEVTIDV 208

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
            G    V  +           +     +      QA+ + + +          V+ GD N
Sbjct: 209 -GLPQPVHVLCNHFKSQNGRNDEERERAAKRRLAQAERVAEIVRGYNLQQEYVVVMGDLN 267

Query: 213 RKINYLGNN-DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYK 268
                  ++    +   D +  +     E           + +     +DY  +    ++
Sbjct: 268 EDAANPWHSLTPLFSIPDLHPVIDPNLPETARYTYYFSGGKPQERLNQLDYIFISTPLHR 327

Query: 269 FLIQESFSEI----------------LYNEDDIKSRGKRLSDHCPISIDYD 303
             +                       +     + S     SDH  + ++ D
Sbjct: 328 AKVTCGIERRGIYNIDKIAAKEGAEPVTPFPTVTSWDTGASDHAAVWVELD 378


>gi|34540111|ref|NP_904590.1| exodeoxyribonuclease III [Porphyromonas gingivalis W83]
 gi|34396422|gb|AAQ65489.1| exodeoxyribonuclease III [Porphyromonas gingivalis W83]
          Length = 254

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 91/304 (29%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+N+N L                 +    L  + +  + D++ LQE  M +     
Sbjct: 1   MKIISYNVNGLRA---------------AMKKDLIGWLREENPDVLCLQETKMQNDQFEK 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  +  + +   +          + +A+  K+    Q  +   G       A 
Sbjct: 46  EEFEALGYRSYLFSAQKKGY----------SGVAIITKH----QPDHIEYGMGMEEYDAE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + ++ ++  S    D  +       +      +  + ++ + ++S
Sbjct: 92  GRF-----IRADFGDLSIVSVYHPSGTSGDERQ-------AFKMVWLEHFQSYVNELRKS 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247
               ++ GD+N     +  +D                W +    D  +   +        
Sbjct: 140 RPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMSRFLADGYVDTFRHTHPELVL 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY ++  N    +          +           SDHCPI
Sbjct: 200 YSWWSYRFQARSRNKGWRIDYCMVTNNLADRIKGADILNEAVH-----------SDHCPI 248

Query: 299 SIDY 302
            ++ 
Sbjct: 249 VLEI 252


>gi|299821801|ref|ZP_07053689.1| exodeoxyribonuclease III [Listeria grayi DSM 20601]
 gi|299817466|gb|EFI84702.1| exodeoxyribonuclease III [Listeria grayi DSM 20601]
          Length = 254

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 80/303 (26%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWN+N L                         Y K  DADI  +QE        ++
Sbjct: 1   MRFISWNVNGLRAAVKKGF---------------SDYFKEADADIFCVQETKLQAGQIEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +  Q     G  +       R
Sbjct: 46  EGLEGYHDYWN----------YAVKKGYSGTAVFTKEEPLSVQ----YGLPEDVHNQEGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     + + ++  +        +  +      +     L        +   
Sbjct: 92  -----VITLEFPAFYFVTVYTPNSQAELKRLDYRTEWEQAFADHIIAL--------DKQK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                   +       +  +  N  +  F      + +A 
Sbjct: 139 PVVFCGDLNVAHQEIDLKNPKTNRKNPGFSDQERAMFGQLLDNGFVDTFRYLYPEQEDAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+       + +      +             SDHCP+ 
Sbjct: 199 SWWSYRMNARSRNVGWRIDYFVVSSRLSDSIQEARIHAEVL-----------GSDHCPVE 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEI 250


>gi|148259957|ref|YP_001234084.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5]
 gi|326403089|ref|YP_004283170.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301]
 gi|146401638|gb|ABQ30165.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5]
 gi|325049950|dbj|BAJ80288.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301]
          Length = 256

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 75/302 (24%), Gaps = 71/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                RT +    +  + K    D++ LQE+         
Sbjct: 1   MRIATWNVN--------------SARTRAGL--IADFLKREQPDLLLLQEIKCET----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +         +  +AV  +    +         +D+       
Sbjct: 40  -----QQFPAAAFEAEGYRAEVVGQKAYNGVAVLSRGAVTVTHRRLPGEEEDA------- 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  + +E  G  + V +++L +                      + L+       E   
Sbjct: 88  AARFIEIEAGG--LLVGNLYLPNGNSGGGDGFAAKLD------WMEKLRRHAASLLEHDR 139

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            F++AGD+N                       +   ++ +                    
Sbjct: 140 DFILAGDYNVCPTDADLAKGALPADDALVRPESRAAFRALIWLGLTDALRALHPDETLYT 199

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+ ++     + L               +    + SDH P+ +
Sbjct: 200 FWDYQAGAWQRDRGLRIDHALLSPRVAERL-------DTVRVAREERDKPQPSDHVPVIV 252

Query: 301 DY 302
             
Sbjct: 253 SL 254


>gi|260598074|ref|YP_003210645.1| hypothetical protein CTU_22820 [Cronobacter turicensis z3032]
 gi|260217251|emb|CBA31170.1| hypothetical protein CTU_22820 [Cronobacter turicensis z3032]
          Length = 370

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 85/258 (32%), Gaps = 19/258 (7%)

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            +   +L+AD++ + E  S  A+A    +    +     R +     + +  I   +   
Sbjct: 119 AKVMSDLNADVLAVVEAESRPALAAFNQEIIAALGGEPFRHVMVIDGNDSRGIDVGLLTG 178

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +      +S+                    +   NG  +WV+  HLKS  +        
Sbjct: 179 AEYPIGPMRSHVDDRDARGQLIFSRDCPEYSVPLANGDTLWVMVNHLKSKGYGG-----K 233

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKT-IDPNDSLI 235
           + S +    QAQ + D    ++++   F+ IAGDFN             +T +    +  
Sbjct: 234 AESDARRKAQAQRVADIYKARRDAGEQFIAIAGDFNDTPESDTLAPLLKETDLRDAFTHP 293

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF----------SEILYNEDDI 285
            F          N    NK  +DY ++    ++ +                       ++
Sbjct: 294 AFDNGGYPGTWGNSAKNNK--LDYILLSPALWERVTAGGVIRKGMWPGERPVKWDVYPEL 351

Query: 286 KSRGKRLSDHCPISIDYD 303
           K   +  SDH  + +D +
Sbjct: 352 KKPQQAGSDHAALWVDLN 369


>gi|254295374|ref|YP_003061397.1| endonuclease/exonuclease/phosphatase [Hirschia baltica ATCC 49814]
 gi|254043905|gb|ACT60700.1| Endonuclease/exonuclease/phosphatase [Hirschia baltica ATCC 49814]
          Length = 315

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 79/283 (27%), Gaps = 35/283 (12%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           +  D TL  Q      ADI  LQE+ +   +     +                + +    
Sbjct: 38  SEDDRTLTAQALSASQADICCLQEVENLVTLTAFHNRYLRRWLKKGYFYRALVEGNDQRG 97

Query: 110 IHTAIAVRKKNVRVLQQS--------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           I   +  R K +R L  +                   R   R  +E+ VE  GK + +  
Sbjct: 98  IDVGVLSRVKIIRKLSHADKTYADLNIKPPLGCHENDRIFRRDCLEIEVEKEGKSLTLFV 157

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNR------ 213
            H KS     +       +      +A+ ++  I Q+        ++  GDFN       
Sbjct: 158 CHFKSMHGGRTETKPVREA------EAKAVRILIEQRFADPEAENWIALGDFNDYFELDG 211

Query: 214 -KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
             +   G           +  +       +   +   +      +D+  M  +       
Sbjct: 212 ATLFDHGLGPLIRDGFAIDAGVTLEKSPLNRWTHYYSHGDVYGALDHIFMSPSLAARNQD 271

Query: 273 ESFSEILYNED------------DIKSRGKRLSDHCPISIDYD 303
                +   +              +     + SDHCP+S+   
Sbjct: 272 ARLRIVRAGQPLRANRYKGHRFGGVGWMRPKSSDHCPLSVTLS 314


>gi|271967547|ref|YP_003341743.1| metal-dependent hydrolase-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270510722|gb|ACZ89000.1| Metal-dependent hydrolase-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 617

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 71/291 (24%), Gaps = 54/291 (18%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             P        +R+ ++NI                +             + L   +V L 
Sbjct: 376 ATPRWEPPGDGLRVAAYNIRM-----------GYGESGRLSLERQADTLRALRPHVVVLS 424

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E         +       +    ERL          D     A+         +++ L+ 
Sbjct: 425 EADRGW----LLNGGHDDVRLIAERLGMRYIWAPAADEVWGDALLTDLPVTSVRNHVLVQ 480

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              + ++     A+E+ +   G+ + V+  HL+                     Q + L 
Sbjct: 481 GGPTGAQ-----ALEVGLRWQGRDVTVIGTHLQPPPGWRE------------LDQVEQLG 523

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             +        P V+AGD N +             +         P       +      
Sbjct: 524 RIVRDAAAGGRPVVVAGDLNLEPADPAWEVLMGSGLTD-------PIAPVRPFSTIPTPG 576

Query: 253 NK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID+ ++                              SDH PI++  
Sbjct: 577 GPAQQIDHVLVTPGFTGRDQANVDVPH--------------SDHRPIAVTL 613


>gi|56752781|gb|AAW24602.1| SJCHGC02357 protein [Schistosoma japonicum]
          Length = 339

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 82/307 (26%), Gaps = 26/307 (8%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           K+R++ WNI        +        +        L+ +     D DIV LQE      +
Sbjct: 28  KIRIMQWNILAQGFIPLDEFVHCPCKMLSFERRCRLIAEEILRYDPDIVCLQEADIIKDI 87

Query: 81  AKVF----PKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            ++      K+ +  ++  +        ++++     A+  R    ++++     L   D
Sbjct: 88  VEILTTRRGKDDYSFYFLPKYNSPCLMIKNNHGPDGLAVIYRNDKYKLIKTEKIPLNEDD 147

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S          + +   N     +  I L         E        L++  + +++   
Sbjct: 148 SRHALFCHFVPKAVGSSNKSFSDIYLICLHLKAKETYREIRKKQGQKLINYLSSFIERIC 207

Query: 196 TQKKESL----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-----FPKEKDSRCN 246
           +           P  I GDFN        N     + + N            +       
Sbjct: 208 STGLSVNSNVFPPIFICGDFNADPTEPVINLLQNFSFNSNTLYKLTSAYYVAEGCKEPEF 267

Query: 247 ANKNLRNKIPI----------DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
               +R    I          DY          L   S                  SDH 
Sbjct: 268 TTWKIRKSKRITNLTEICHTVDYIWYCNQLCTLLGVWSIPSKREIGPSGLPSAIFPSDHM 327

Query: 297 PISIDYD 303
            +  D+ 
Sbjct: 328 NLIADFS 334


>gi|4678346|emb|CAB41156.1| putative protein [Arabidopsis thaliana]
          Length = 686

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/337 (13%), Positives = 97/337 (28%), Gaps = 87/337 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + ++WN N+             + R  +D++   ++  + D D++ +QE+    A  K  
Sbjct: 366 KFMTWNANSF------------LLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGGKGK 413

Query: 85  PKNTWCI----------------FYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQS 127
           PKN   +                  S+    N+    S  +  +   A+  K     ++ 
Sbjct: 414 PKNHEELSDDTKVLREEKQILTRALSSPPFGNYGVWWSLADSKYAGTALLVKKCFKPRKV 473

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y  L    S      R  +        +   +L+ +  +     +       +     + 
Sbjct: 474 YFNLDKLASKHEPDGRVILA-----EFETFRLLNTYSPN-----NGWKDEENAFQRRRKW 523

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY------------------------------ 217
            + + +++   K S  P +  GD N                                   
Sbjct: 524 DKRIVEFLN--KTSDKPLIWCGDLNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGF 581

Query: 218 -LGNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYFVMDQNA 266
                  F  TI     +  +               S     K    ++ IDYF++ +  
Sbjct: 582 TPSERGRFGATIKEGRLVDAYRYLHKEQEMESGFSWSGNPIGKYRGKRMRIDYFLVSEQL 641

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++           +     G   SDHCP++++  
Sbjct: 642 KDRIVSCKMHGRGIELE-----GFHGSDHCPVTLELS 673


>gi|56552297|ref|YP_163136.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543871|gb|AAV90025.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 261

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 88/304 (28%), Gaps = 73/304 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ S+N+N ++                +    L ++ +    DI+ LQE+ S +A     
Sbjct: 3   KIASFNVNGIN----------------ARLPRLIEWLEKFQPDILCLQELKSDDA----- 41

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                           +         +  +A+  K     Q         D      +R 
Sbjct: 42  -----RFPQEEIEKTGYYCLYHGQKAYNGVAILSK----EQPKLIRTSLPDDPDPTQSRY 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +E     + V  ++L +   L+S +  Y  +        +          +   P
Sbjct: 93  -----IEAEIDNLTVASLYLPNGNPLNSPKYDYKLA------WFKAFLAHARSLWQQEKP 141

Query: 205 FVIAGDFNRKINYL-----------------GNNDDFWKTIDPNDSLI----RFPKEKDS 243
            ++AGD+N   ++                    +  +W+ +           R P E   
Sbjct: 142 VILAGDYNVVPSFDIKDIRNAAALADNALLAPESLFYWRQLLAMGWTDSLRVRHPSEPLY 201

Query: 244 RCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID+ ++  +    L            D      ++ SDH P+ 
Sbjct: 202 SFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGV-------DRQMRGQEKASDHAPVW 254

Query: 300 IDYD 303
           I+ D
Sbjct: 255 IEID 258


>gi|87308394|ref|ZP_01090535.1| extracellular nuclease, putative [Blastopirellula marina DSM 3645]
 gi|87288951|gb|EAQ80844.1| extracellular nuclease, putative [Blastopirellula marina DSM 3645]
          Length = 430

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 95/320 (29%), Gaps = 46/320 (14%)

Query: 2   IRKYVLALVFFLV---PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +R   L +   L+    CT + A  + + SWNI  L + E                  L 
Sbjct: 1   MRTISLFIALSLLWITACTPASADIIHVGSWNIEWLGKPEMRKSPPQKPAD-------LA 53

Query: 59  QYAKNLDADIVFLQEMGS---------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                   D++ LQE+              + +V            +  +   +     D
Sbjct: 54  AEIDASGVDVLALQEICDDLPEHDRLGNKTLDEVCRLLNQRAGNQWKYELFPKRDIYAED 113

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI--NGKKIWVLDIHLK 165
             T +A  +  V+ +  +  +              R+                V+ +H+K
Sbjct: 114 QLTGVAWNEARVQRVGGAMRITPVDLLGDNYITWDRQPYAAKFSAGEGKTDFVVIPVHMK 173

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNR-KINYLGNND 222
           S     S E     +       A  L   +   K+       +I GD N    +  G   
Sbjct: 174 SNYGDSSGEMRKHRAAE-----ASALIAELPAVKKMFGDEDIIILGDTNALSADEEGIQK 228

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                    +S  R    KD+              D  ++ QN  +F    +  E++++ 
Sbjct: 229 FVKAGFRDLNSADRSTHTKDAPF------------DRALVPQNQPEF---ANAREVIHSG 273

Query: 283 DDIKSRGKRLSDHCPISIDY 302
            D +    +LSDH  IS   
Sbjct: 274 RDSRDYRNKLSDHYLISFQI 293


>gi|319760561|ref|YP_004124499.1| exodeoxyribonuclease III [Candidatus Blochmannia vafer str. BVAF]
 gi|318039275|gb|ADV33825.1| exodeoxyribonuclease III [Candidatus Blochmannia vafer str. BVAF]
          Length = 274

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 85/311 (27%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VS+NIN L                 +    L Q    L  D++ LQE   +N +   
Sbjct: 1   MRFVSFNINGL----------------RARTHQLDQLINKLQPDVLGLQETKVHNDL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142
                        +   +         +  +A+  KK   ++ + +PL            
Sbjct: 42  -------FPIKKIKKYGYHVYYDGQKQYHGVALFLKKLPLIVTRGFPL------NPCPYQ 88

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +R +   +  +   + V++ +        S +  Y        Q  Q LK++I     + 
Sbjct: 89  KRIITAQITTSIGSLTVINGYFPQGENNQSEKFIYKK------QFYQNLKNYIQNNYSNE 142

Query: 203 VPFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
              +I GD N                          L     +   +     +  +  + 
Sbjct: 143 SLLLIMGDMNISPTDLDVGIGKKNTDRWIKMGKCAFLPEERQWITDLMNWGLIDIYRSKY 202

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
             + N       +           ID  ++ Q                  +         
Sbjct: 203 PYQNNRYSWFSYQSNGFKNNRGLRIDLVLVTQPLAHLCTCSGI-------NYDIRNMTHP 255

Query: 293 SDHCPISIDYD 303
           SDH PI +D D
Sbjct: 256 SDHAPIWVDLD 266


>gi|155212609|gb|ABT17368.1| hypothetical protein [uncultured haloarchaeon FLAS10H9]
          Length = 620

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 77/284 (27%), Gaps = 53/284 (18%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            + A+ +  +S+NI+   + +G             +   +R   +   A +V LQE    
Sbjct: 384 TAAAEPLTALSFNIHLYLDSDG-----------EHNLGAVRDLIRESGAGVVGLQETAGG 432

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              +       W                        +A+        ++   L       
Sbjct: 433 RLTSGGLDGVRWLAHELGYHAA---VGPPARLASYGVALLSAWPIREERVVVLPE----- 484

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             +  R A+   VE     + V+  HL               +  +   QA+ + D +  
Sbjct: 485 RDSATRIALAATVESPLGPLPVVVTHL-------------ETAGDVRVAQAERVVDLVRA 531

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
             +     V+ GD N   +     + F   +D                +       +  I
Sbjct: 532 TGDPDRALVL-GDLNATPDERP-YEVFSTVLDD------PWAGSAPGADTYSAADPRRRI 583

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           DY ++ +       +                   +SDH  +S+ 
Sbjct: 584 DYALVGRGWEARRGEVI-------------GSPTVSDHLGVSVT 614


>gi|255993955|ref|ZP_05427090.1| exodeoxyribonuclease III [Eubacterium saphenum ATCC 49989]
 gi|255993623|gb|EEU03712.1| exodeoxyribonuclease III [Eubacterium saphenum ATCC 49989]
          Length = 252

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 77/303 (25%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +SWN+N +                           +    D   +QE        ++ 
Sbjct: 3   KFISWNVNGIRACIKKGF---------------LDVLEGESPDYFAVQETKMQEGQEEIL 47

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                  + S +R             ++   V  K   V       +   D   R     
Sbjct: 48  TNGYHQYWDSAKR-----------KGYSGTLVLSKEEAVSTSKGIGIEEHDEEGR----- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               +V  + K  +++++++ +     +  +               L            P
Sbjct: 92  ----VVTADFKDFYLVNVYVPNSKPELARLDYRQHWEDDFRDYVVKLNK--------EKP 139

Query: 205 FVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +I GD N               R   +     + +  +        F  +   +  A  
Sbjct: 140 VIICGDLNVAHTEIDLKNPKTNRRNPGFTDEEREKFTELLEAGFTDTFRYKYPDKEGAYT 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++  +    +        +Y            SDHCP+ +
Sbjct: 200 WWSYRFNARKNNAGWRIDYFLVSNDVKDKIEDAKILSDVY-----------GSDHCPVVL 248

Query: 301 DYD 303
           + D
Sbjct: 249 ELD 251


>gi|225427661|ref|XP_002270851.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 414

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 42/305 (13%)

Query: 40  VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV-FPKNTWCIFYSTERL 98
                +   +  +    +    +NL AD + LQE+  Y++  K     N +   Y     
Sbjct: 105 FPHSPSPCLKWKARSQAILTVLRNLGADFLCLQEVDEYDSFYKGNMDSNGYSSIYVQRSG 164

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRV---------------LQQSYPLLGAKDSFSRAGNR 143
             H         ++A  V ++ +                      P     D+  +   R
Sbjct: 165 QKHDGCGIFYKHNSAELVLEEKIEYNDLVDLNDDGSYSNDRHCDTPASANSDAEPKKEER 224

Query: 144 R--------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                           +     +      ++ +      +     +        L  +  
Sbjct: 225 GDPNDPRVRLKRDCVGIMAAFRLKDPSHHLVIVANTHLYWDPEWADVKLAQAKYLLSRLA 284

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLI-----RFPK 239
             K  ++ K E     ++AGDFN                    ++  D L       +  
Sbjct: 285 QFKTVVSDKFECTPSVLVAGDFNSTPGDKVYQYLVSGNSSVPQLECLDGLPIPLCSVYDF 344

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCP 297
            +      N        +DY     + +   +   E       +           SDH P
Sbjct: 345 TRGEPPFTNCTPDFTNTLDYIFFSPSGHIKPVSFLELPEPDSSDVAGGLPNHHHPSDHLP 404

Query: 298 ISIDY 302
           I  ++
Sbjct: 405 IGAEF 409


>gi|302760229|ref|XP_002963537.1| hypothetical protein SELMODRAFT_270348 [Selaginella moellendorffii]
 gi|302799569|ref|XP_002981543.1| hypothetical protein SELMODRAFT_178984 [Selaginella moellendorffii]
 gi|300150709|gb|EFJ17358.1| hypothetical protein SELMODRAFT_178984 [Selaginella moellendorffii]
 gi|300168805|gb|EFJ35408.1| hypothetical protein SELMODRAFT_270348 [Selaginella moellendorffii]
          Length = 570

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/329 (12%), Positives = 91/329 (27%), Gaps = 46/329 (13%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                 ++S+N+  +  +  +  S               L +      ADI+ LQE+ S 
Sbjct: 233 APGSFTVLSYNVLADLYATSDMYSYCPQWALSWAYRRQNLLREIVGYRADILCLQEIQSD 292

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL------ 131
           +      P+     + +  +        +        A   +N R LQ     +      
Sbjct: 293 HFDEFFAPELEKHGYSAVYKKKTAEVYAAGVYTIDGCATFYRNDRFLQVKKYEVEFNKAA 352

Query: 132 -GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF--------CFLDSLENTYSPSCS 182
               +++  +  R+A    +  +   + V+   L           C  ++  +       
Sbjct: 353 QSFSEAYMPSAQRKAALTRLLKDNVALIVVLEVLDYPDPSKKQLICVANTHIHANPELKD 412

Query: 183 LLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--- 238
           +   Q Q L   + +   S   P ++AGDFN       ++      ++P    +      
Sbjct: 413 VKLWQVQTLLKGLEKIAASAEIPMLVAGDFNSVPGSAPHSLLATGRVEPTHPELAIDPLG 472

Query: 239 ------------------------KEKDSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQE 273
                                      +     N        +DY      +     + E
Sbjct: 473 ILRPASKLCHQLPLVSAYSALSRRDGSNEPLFTNCTRDFLGTLDYIFYTADSIVVDSLLE 532

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              E    +D      +  SDH  +  ++
Sbjct: 533 LLDEESLRKDTALPSPEWSSDHIALLAEF 561


>gi|256090614|ref|XP_002581279.1| nocturnin [Schistosoma mansoni]
 gi|238667142|emb|CAZ37518.1| nocturnin, putative [Schistosoma mansoni]
          Length = 338

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 85/311 (27%), Gaps = 34/311 (10%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           K+R++ WN+        +        +        L+ +     D D+V LQE      +
Sbjct: 27  KIRIMQWNMLAQGFIPLDEFIYCPCKMLSFERRCKLISEEILRYDPDVVCLQEADIIKDI 86

Query: 81  AKVFPKNTWCIFYSTERLINHSKRD-----SNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            K   + +    YS   L   S        ++     A+  R  N  +++     L    
Sbjct: 87  VKCLNERSGRDNYSFCFLPKMSSPCLMVKNNHGPDGLAVIYRNDNYELIKSEKIPLNEDS 146

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S          +++  ++     +  I L     +   E        L     ++L  +I
Sbjct: 147 SRYALFCHFIPKVVGHLSKSCSDIYLICLHLKAKVHCSEIRRKQGEEL----VKYLNSFI 202

Query: 196 TQKKESLVP--------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-FPKEKDSRCN 246
            +   +  P          I GDFN +      N     +++ N              C 
Sbjct: 203 KRISSTSAPLNSTVFPPIFICGDFNAEPTEPVINILQNFSLNSNTLYKLTSAYYTAGGCK 262

Query: 247 ANKNLRNKIP--------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
             +    KI               IDY          L   S         +        
Sbjct: 263 EPEFTTWKIRKSKRIVELTEDCHTIDYIWYCDRLCTLLGVWSIPSKNEIGPNGLPSAIFP 322

Query: 293 SDHCPISIDYD 303
           SDH  +  D+ 
Sbjct: 323 SDHMNLIADFS 333


>gi|149175039|ref|ZP_01853662.1| hypothetical protein PM8797T_25206 [Planctomyces maris DSM 8797]
 gi|148846017|gb|EDL60357.1| hypothetical protein PM8797T_25206 [Planctomyces maris DSM 8797]
          Length = 321

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 87/312 (27%), Gaps = 59/312 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             + ++ + +R+++ NI   +E                   LLR+    L  D++  QE 
Sbjct: 31  TSSETLDRPLRVLTANIWNYAEP------------YELRMKLLREQITALQPDLIGFQEA 78

Query: 75  ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                  + V ++     + I +           D+       +AV  +     +  + L
Sbjct: 79  GWKPEEEHQVKQLLQGLNYHIEHE------SDGSDNKERRLLDVAVASRWPLKRKAFHSL 132

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G+  +        AVE+       ++  +     +    D        +          
Sbjct: 133 PGSGKA-------LAVEITAPQPIGRLLFVSTFGTARWQFDRELQRERDAV--------A 177

Query: 191 LKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNAN 248
           L  +I +    +  P +IAGDF+   +  G       +++D + +      +      A 
Sbjct: 178 LDRFIREISDPNGFPPIIAGDFDATPDSAGIRYLTGLQSLDGHSTHYYDAWKAAGNRGAG 237

Query: 249 KNL------------RNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                          +          IDY  +    +                +      
Sbjct: 238 PTWTTQNHYAKKTTEQFWHLSDHHRRIDYIFLGSPHHFRGYAR--VVSTRVVLNQPVGKD 295

Query: 291 RLSDHCPISIDY 302
             SDH  +  + 
Sbjct: 296 WPSDHFGVMAEI 307


>gi|42562445|ref|NP_174435.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|332193241|gb|AEE31362.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana]
          Length = 388

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 87/324 (26%), Gaps = 46/324 (14%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            RLVS+NI      +   +     +  +  +    +    KNL AD   LQE+  Y++  
Sbjct: 63  FRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYDSFY 122

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    +        +R     +         + A      R+           DS S + 
Sbjct: 123 RNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCSE 182

Query: 142 NRR----------------------------AVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            +                              +     IN     ++ +      +   L
Sbjct: 183 QKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLYWDPEL 242

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------LGNNDD 223
            +        L  +    K  I+ + E     ++AGDFN                   + 
Sbjct: 243 ADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYLVSGNAKPTET 302

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--- 280
             +   P      +   +      N        +DY  +  +   F+   S  ++     
Sbjct: 303 IEEEEAPVPLSSVYEVTRGEPKFTNCTPGFTNTLDYIFISPS--DFIKPVSILQLPEPDS 360

Query: 281 -NEDDIKSRGKRLSDHCPISIDYD 303
            +           SDH PI  +++
Sbjct: 361 PDVVGFLPNHHHPSDHLPIGAEFE 384


>gi|109897358|ref|YP_660613.1| endonuclease I [Pseudoalteromonas atlantica T6c]
 gi|109699639|gb|ABG39559.1| Endonuclease I [Pseudoalteromonas atlantica T6c]
          Length = 1503

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 91/328 (27%), Gaps = 53/328 (16%)

Query: 22   QKVRLVSWNINTLSEQEGVSLW-----------KNSVKRTTSDYTLLRQYAKNLDADIVF 70
              +++ S N+        VS              +S                 +DADIV 
Sbjct: 1114 GNLKVASLNVLNYFNTLDVSPNVCGPSNLECRGADSEIELERQRAKTLAALLAMDADIVG 1173

Query: 71   LQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            L E+ +      +AV  +       +  +T   ++       + I  A+  +   V V+ 
Sbjct: 1174 LMEVENNGFGANSAVGDLVSGLNDVLGANTYATVDAGSAIGTDAITVALIYKPAVVSVVG 1233

Query: 126  QSYPLLGAKDSFSRAGN-------RRAVELLVE--INGKKIWVLDIHLKS-----FCFLD 171
            Q   L  +       G        R A+        N +++ V   H KS         D
Sbjct: 1234 QPAILDSSNSISDDDGPLFLDTKNRPALNQKFALVANNEELVVSVNHFKSKGSSCGAGDD 1293

Query: 172  SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                         ++ A+ L  +++Q+     P +I GD N             +     
Sbjct: 1294 DTTTGQGNCNLTRTRAAEALTTFLSQQFS-DTPTLIIGDLNSYAMEEPILKILQQ----- 1347

Query: 232  DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
                   K       +         +D+ +        ++  +   I  +E  +      
Sbjct: 1348 GYTDLANKFGGDEAYSYSFGGEFGYLDHALASATLVDQIVDTTEWHINADEPIVFDYNVE 1407

Query: 290  ---------------KRLSDHCPISIDY 302
                            R+SDH P+ I  
Sbjct: 1408 FKSDQQLIDYYAPDAYRMSDHDPVVISL 1435


>gi|239503516|ref|ZP_04662826.1| putative extracellular nuclease [Acinetobacter baumannii AB900]
          Length = 812

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 94/327 (28%), Gaps = 54/327 (16%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K++DAD+  L E+ + 
Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEITNN 520

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +         + +      R  ++ I  AI    K V+ L ++  L     
Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGSDVIAVAIIYNSKRVKPLNKAVVLDLGD- 579

Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLLS 185
                 NR  +    +     K   V+  HLKS        N+                 
Sbjct: 580 -----KNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCSGVDANSSDADQNDGQGCWNPTRV 634

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  W+ +          ++ GD N                  N  ++    +   
Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAP----ILAFEKANYKVLLNDAKVGQ 690

Query: 244 RCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---- 289
              A                   +D+ + D + Y  +++     I  +E  +        
Sbjct: 691 GTQAYSYVFGVASDANGNGGAGNLDHAIADADLYPKVVRTFAWHINADEPTVLDYNEEYK 750

Query: 290 -------------KRLSDHCPISIDYD 303
                         R SDH P+ +D D
Sbjct: 751 TDEQKALFYGEDAYRSSDHDPVIVDLD 777


>gi|163848327|ref|YP_001636371.1| endonuclease/exonuclease/phosphatase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222526243|ref|YP_002570714.1| Endonuclease/exonuclease/phosphatase [Chloroflexus sp. Y-400-fl]
 gi|163669616|gb|ABY35982.1| Endonuclease/exonuclease/phosphatase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450122|gb|ACM54388.1| Endonuclease/exonuclease/phosphatase [Chloroflexus sp. Y-400-fl]
          Length = 1118

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 87/338 (25%), Gaps = 54/338 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT-----------SDYTLLRQYAKN 63
               +V   + +V  N+              +   T                        
Sbjct: 505 TTPPAVGGSITVVGMNLLNYFNTFSGCTNGLTGGPTDCRGAENATEFTRQTAKTVATIVA 564

Query: 64  LDADIVFLQEMGSY-----NAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHT 112
           L+  ++ L E+ +      +A+A +              F   +          N+ I  
Sbjct: 565 LNPAVLGLMEVENDGYGPASAIADLVNRLNSATAPGTYAFIDVDAATGQVDALGNDAIKV 624

Query: 113 AIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            I  +   V  + Q+  L     +   DS  R     A    V  +G +  V   H KS 
Sbjct: 625 GIIYQPALVTPVGQTAALNTPAFITGGDSAPRNRAALAQAFEVNASGARFVVSVNHFKSK 684

Query: 168 CFLDSLENTYSPSCS---LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNND 222
                  +      +   + +  A  L  W+       +    +I GD N          
Sbjct: 685 GSPCDAPDAGDGQGNCNIVRTNAANTLAAWLASDPTGINDPDVLIIGDLNSYAKEDPI-- 742

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
              + ++         +   +   +         +DY + + +    +   +   I  +E
Sbjct: 743 ---RALETQGYENLVERFGGANAYSYVFNGQWGYLDYALANASLSPQIAGIAEWHINADE 799

Query: 283 DDIKSRG-----------------KRLSDHCPISIDYD 303
             +                      R SDH PI +  D
Sbjct: 800 PSVLDYNTNFKSAGQISSLYAPDFYRTSDHDPIVVGLD 837


>gi|158521044|ref|YP_001528914.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans
           Hxd3]
 gi|158509870|gb|ABW66837.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans
           Hxd3]
          Length = 347

 Score = 89.2 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 112/363 (30%), Gaps = 86/363 (23%)

Query: 2   IRKYVLALVFFLVPCT--ASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYTLL 57
            R   +  +  +V C+  A  A+   L S+N+  L +   +G          T      +
Sbjct: 7   RRLISIISLLVIVACSGPAPAARTFTLASYNVENLFDAVYDGTEYDDYVPGSTQGWNKKM 66

Query: 58  RQY--------AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                         ++ADIV LQE+ S  A+  +  +         +R   ++   +   
Sbjct: 67  ADIKTANTAEAIGAINADIVCLQEVESKIALKNLLTRLNTP----KQRYPFYAIAQTPTP 122

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           +  A+            ++P++  +D     G R  ++ ++ I+ K + V   H KS   
Sbjct: 123 VRCAL----------VSTFPIVHTQDIVPGEGQRAILKAVLSIDKKHLTVFICHWKSKSG 172

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            +S               A  L+  I +       FVI GDFN   N      D  +  D
Sbjct: 173 PES----------RRIPYAAALRKAIEK-LPPNTDFVITGDFNANYNEHQTFADVARFND 221

Query: 230 PND------------------------------SLIRFPKEKDSRCNANKNLRNKIPIDY 259
                                                + +  + R  +      K   D 
Sbjct: 222 TQGVTGINHVIKTLHNDALVDEKILADSRNELLLYNLWLELPEYRRWSYNFFGKKESPDN 281

Query: 260 FVMDQNAYKF----LIQESFS----EILYNEDDIKSR-----------GKRLSDHCPISI 300
            ++ ++ Y       +  SF     ++ ++ + +              GK  SDH PI  
Sbjct: 282 MLVPRSLYDKKGIDYVDNSFDRVHADLFFDNNRVYRWQRADRGKGRHLGKGYSDHLPIRA 341

Query: 301 DYD 303
            + 
Sbjct: 342 TFT 344


>gi|299532507|ref|ZP_07045897.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44]
 gi|298719454|gb|EFI60421.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44]
          Length = 291

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 93/309 (30%), Gaps = 49/309 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA- 81
           + +++WN+      +G+     SV+R       + +  ++   D++ LQE+  +Y  +  
Sbjct: 1   MNILTWNVQWCCGMDGLV----SVERIVRHALQMGE--QSGGLDVLCLQEIAVNYPDLQG 54

Query: 82  ----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               ++         +      +  +  S+        +  +   +L Q Y L     + 
Sbjct: 55  RPGDQLAELKALLPGWQIFFGASVDEFTSSGHQRFGNLIATRLPVLLVQHYLLPMPAQAD 114

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            R   R    + V+      + ++  HL+ F     +    + +   L  QA  L D   
Sbjct: 115 MRCMQRMCSVVTVDDAALGPVRIMTTHLEYFSARQRM--AQAGALRALQMQACALADAPP 172

Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDS-----------LIR 236
           Q      P+         V+ GDFN + +           +   +             + 
Sbjct: 173 QPASDGSPYQTKPHTRHAVLCGDFNFEPHEPEYAVLSAPWVAGEEGCLQAGQWRNSWDVL 232

Query: 237 FPKEKDSRCNA---NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +P +                    D   +  +  + +   S                + S
Sbjct: 233 YPGQPQPPTFRLVDRTWGAEPGACDLIWVSDSLCQRVHTWSV-----------DSATQAS 281

Query: 294 DHCPISIDY 302
           DH P+ +  
Sbjct: 282 DHQPVMLTL 290


>gi|256422393|ref|YP_003123046.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588]
 gi|256037301|gb|ACU60845.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588]
          Length = 259

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 83/301 (27%), Gaps = 69/301 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ +    D+V LQE          
Sbjct: 1   MKIATYNVNGVNG----------------RLPVLLRWLEESAPDVVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   ++           +A+  +N+++ +    L G  +      +R
Sbjct: 35  LKAPQEKFPEQAIRDAGYNAIWHGQKSWNGVAILARNLQIEEIRRALPGDPEDVH---SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++         +  ++L +       +  Y           + L     +     V
Sbjct: 92  YIEAVI----NGDFILGCLYLPNGNPAPGPKFDYK------LNWFKRLTAHAKELLAQDV 141

Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P ++ GD+N     L            +   +                 ++         
Sbjct: 142 PVILTGDYNVMPTELDVYKPERWVDDALFRPETRAAFKELVELGWTDAIRKLYPEEKIYT 201

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + ID+F++  +  K L            D      ++ SDH P+ I
Sbjct: 202 FWDYFRDAYGRNAGLRIDHFLLSPHFGKRLKAAGV-------DRDVRGWEKTSDHAPVWI 254

Query: 301 D 301
           +
Sbjct: 255 E 255


>gi|218245849|ref|YP_002371220.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8801]
 gi|257058897|ref|YP_003136785.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8802]
 gi|218166327|gb|ACK65064.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8801]
 gi|256589063|gb|ACU99949.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8802]
          Length = 262

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 98/306 (32%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                   +    +  + K  + D++ +QE  +   +   
Sbjct: 1   MKVATWNVN----------------SIRTRQPHVIDWLKTNNIDVLCVQETKVIDQDFPK 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F +  + ++   ++  N            AI  R+    V     P++G   +     
Sbjct: 45  TPFEELGYHLYIYGQKAYN----------GVAIFSRQPLEDVTMGFTPIVGESLAEDFDE 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK-KE 200
            +R +  +     + + ++++++ +   + + +  Y        +  + LK ++TQ  ++
Sbjct: 95  QKRVITGIF----QGVRIVNLYVPNGSAVGTEKYDYK------LRWLKVLKQYLTQFLEK 144

Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           S     I GDFN  +                      +  K I        F K      
Sbjct: 145 SKQELCICGDFNIALEDKDIYNSKSKEDHIMSSPLERESLKDILDLGLKDAFRKFTSEG- 203

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           ID+  +    Y+  I  +        D    +  + SDH 
Sbjct: 204 GQFSWWDYRSGGFQRNRGWRIDHHYLTPKLYEKAISCTI-------DIEPRKLTQPSDHA 256

Query: 297 PISIDY 302
           P+ +++
Sbjct: 257 PVIVEF 262


>gi|121595605|ref|YP_987501.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42]
 gi|120607685|gb|ABM43425.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42]
          Length = 291

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 85/313 (27%), Gaps = 61/313 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAVAKVF 84
           LV+WN       +G             D   + QYA  L D D++ LQE+          
Sbjct: 3   LVTWNTQWCRGLDG-----------RVDPARIVQYALALGDVDVLCLQEIAVNYPGLAGA 51

Query: 85  PKNTWCIFYSTERLINH-------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           P +      S               +  +         +  +   +  Q +PL    D+ 
Sbjct: 52  PGDQVAQVQSALPAGWQVFFGAAVDEWTAAGRQRFGNLIATRLPVLQLQHHPLPYPPDAG 111

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            R+  R    L V+      + V+  HL+ +     +    + +   L  QA        
Sbjct: 112 VRSMPRLCSVLTVQDPALGPVRVMTTHLEYYSKPQRM--AQALALRALHLQACAQAAQPP 169

Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           Q      PF         V+ GDFN + +           +   +        +    +A
Sbjct: 170 QGLADGSPFQPKAHTPHAVLCGDFNLQAHE-PEYAVLAAALADEEGATAGQAGQPPLWDA 228

Query: 248 N------------------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                                    +  D+  +  +    +       +           
Sbjct: 229 WRLLHPGAPQPPTFCVFDQTYAPQPLACDFIWVSDSLRSRVRAVRVDGVT---------- 278

Query: 290 KRLSDHCPISIDY 302
            + SDH P+ ++ 
Sbjct: 279 -QASDHQPVLLEL 290


>gi|313620750|gb|EFR92007.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           innocua FSL S4-378]
          Length = 257

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 77/286 (26%), Gaps = 36/286 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +  +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEESLLPQ-MRDM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++A     +         P + +  S +    R
Sbjct: 54  KEMLDWDYFGVGRDDGYEKGEFTAVFYNSARFRLLQEGHFWLSETPDVPSIHSTAM-FPR 112

Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             V   +E   +G++ ++ + HL                       A  L          
Sbjct: 113 ICVWGQLEDSTDGRQFYIFNTHLDHVS-------------EEARLFASQLLLQKAGLIAE 159

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPID 258
            +P ++ GDFN +      N    K  D         K      +  + LR       ID
Sbjct: 160 NLPVILLGDFNTEPETPTYNFITKKYQDAQLISQTPIKGPIGSFHDFQPLRPENELEKID 219

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Y  + +          F    Y     +  G   SDH P++   ++
Sbjct: 220 YIFVSKE---------FRVHSYKTITDQVDGCSASDHFPVTATLEW 256


>gi|91217808|ref|ZP_01254763.1| hypothetical protein P700755_06530 [Psychroflexus torquis ATCC
           700755]
 gi|91184009|gb|EAS70397.1| hypothetical protein P700755_06530 [Psychroflexus torquis ATCC
           700755]
          Length = 271

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 105/305 (34%), Gaps = 48/305 (15%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L +   L+  +     +V++ SWNI  L              ++  +   + +  +  D 
Sbjct: 7   LVVFLSLLFVSTISLAQVKISSWNIRHLGNS-----------KSKIEIEFMAETLR--DF 53

Query: 67  DIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           D V +QE+    G   AVAK+  +           +   ++  + +    A   +   ++
Sbjct: 54  DAVAIQEVVAGNGGAQAVAKLADELNRKGSRWDYVVSKPTQGGTYSSERYAFLWKTSRLK 113

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           V ++++  L           R    +  +   +   +++IH                   
Sbjct: 114 VDRKAWLDLD----CIEEFEREPYFIRFKFENQDFTLVNIHAVPKSKQPE---------- 159

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              Q+ ++LK +     +    F+  GDFN   ++       +  +     +     +K 
Sbjct: 160 ---QELKYLKLYPELYPDEN--FIFLGDFNLPESHS-----VFNPLKSKGFISALVNQKT 209

Query: 243 S---RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           S   +C A          D   +D  A+K L      ++ Y         + +SDH PI 
Sbjct: 210 SLKMKCKAGI--CLASEYDNIFIDSKAFKILKTG--VDLFYETFTDLKSARMISDHIPIW 265

Query: 300 IDYDF 304
           +++DF
Sbjct: 266 VEFDF 270


>gi|312141216|ref|YP_004008552.1| exodeoxyribonuclease iii [Rhodococcus equi 103S]
 gi|311890555|emb|CBH49873.1| exodeoxyribonuclease III [Rhodococcus equi 103S]
          Length = 266

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 67/307 (21%), Gaps = 70/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +    D D++ +QE    +     
Sbjct: 1   MRIATWNVN----------------SVRARTDRIVDWLARTDTDVLAMQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--PLLGAKDSFSRAG 141
                    Y       +            +A+  +      Q       G         
Sbjct: 41  ------QFPYERFTEAGYEVAHVGLSQWNGVAIASRIGLEDVQVGFADQPGFNKDPEAEA 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-- 199
            R A  +   + G  + V  +++ +   L      Y        +    L+         
Sbjct: 95  TREARAIGATVGG--VRVWSLYVPNGRELTDPHYVYK------LEWLAKLRADAEGWLAG 146

Query: 200 ESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSR 244
                  + GD+N                         D +                   
Sbjct: 147 NPDAQIALVGDWNVAPTDEDVWDPAFFEGKTHTSQPERDAFDAFAEAGFADVVRPHTPGP 206

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                IDY +        +            D  + +GK  SDH
Sbjct: 207 -GVYTYWDYTQLRFPKRQGMRIDYVLGSPAFAARVTGAHI-------DRDERKGKGASDH 258

Query: 296 CPISIDY 302
            P+ +D 
Sbjct: 259 APVVVDL 265


>gi|221068733|ref|ZP_03544838.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1]
 gi|220713756|gb|EED69124.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1]
          Length = 291

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 89/305 (29%), Gaps = 39/305 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           + ++SWN+      +G      SV+R       + + A  L  D++ LQE+         
Sbjct: 1   MNILSWNVQWCCGMDGQV----SVERIVRHALQMGEQAGGL--DVLCLQEIAVNYPDLQG 54

Query: 75  ---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                   +  + P        S +   +               V  +   +  Q +PL 
Sbjct: 55  QPGDQPAELKALLPGWQIVFGASVDEFTSRGH------QRFGNLVATRLPLLQLQHHPLP 108

Query: 132 GAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              D+  R   R    + V +     + ++  HL+   F        + +   L  QA  
Sbjct: 109 MPADADVRCMQRMCSVVTVADAALGPVRIMTTHLEY--FSKRQRMAQAGALRDLQMQACA 166

Query: 191 LKDWITQKKESLVPF---------VIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPK 239
           L D   Q      P+         V+ GDFN + +          W   +         +
Sbjct: 167 LADAPPQPASDGSPYQTKPHTRHAVLCGDFNFEPHEPEYAVLSAPWAAGEQGCLQAGQWR 226

Query: 240 EKDSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +  +       + D     +     L+  S S   + +          SDH P+
Sbjct: 227 NSWDLLHPGQPQPPTFRLVDRTWGAEPGACDLLWVSDSLCQHVQAWRVDSTTEASDHQPV 286

Query: 299 SIDYD 303
            +   
Sbjct: 287 MLTLS 291


>gi|194367742|ref|YP_002030352.1| exodeoxyribonuclease III [Stenotrophomonas maltophilia R551-3]
 gi|194350546|gb|ACF53669.1| exodeoxyribonuclease III [Stenotrophomonas maltophilia R551-3]
          Length = 258

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 83/304 (27%), Gaps = 73/304 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ SWN+N+L+                     L Q+ K    DIV +QE         
Sbjct: 3   PMKIASWNVNSLN----------------VRLPHLEQWLKEFGPDIVGIQET-------- 38

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      S      +    +    +  +A+  +          + G +D   R   
Sbjct: 39  --KLEDHKFPDSALIAAGYRSVFAGQKTYNGVALLSREP-AQDVQIGIPGFEDEQKR--- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++      + V+++++ +   + + +  Y        +  + +  WI ++ +  
Sbjct: 93  ------VIAGTFGDLRVINLYVVNGQDIGTDKYEYK------LRWLEAVHAWIAEELQRH 140

Query: 203 VPFVIAGDFNRKINYLGNNDD-FWKTID--------------PNDSLIRFPKEKDSRCNA 247
              ++ GDFN   +    +D   W                      L    +  +     
Sbjct: 141 PKLIVMGDFNIAPDARDVHDPEVWNENHILTSTAERGALNKLLQLGLHDGFRLHNDEAGV 200

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID  ++        +           D      +R SDH P 
Sbjct: 201 FSWWDYRAAGFRRDLGLRIDLTLVSDALKGSAVASGI-------DREPRTWERPSDHAPA 253

Query: 299 SIDY 302
            +  
Sbjct: 254 WVQI 257


>gi|188583700|ref|YP_001927145.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001]
 gi|179347198|gb|ACB82610.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001]
          Length = 269

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/306 (9%), Positives = 76/306 (24%), Gaps = 66/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                        + ++ +    D++ LQE        ++
Sbjct: 3   LTVTTWNIN----------------SVRLRIESVLRFLREEQPDVLCLQETKCP---DEL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +            +   +    +  +A+  +   + +         D+      R
Sbjct: 44  FPLKAFKG------SGYENIVFAGQKGYNGVAIVSRFPLLTRDVMRFCERADA------R 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +L    G    ++          D      +P  +        L+ W  ++     
Sbjct: 92  HISAVLGPEAGPAAGIVLHDFYVPAGGDVPHRDLNPKFAHKLDFLSELRAWGGRRVSG-- 149

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                   +     +           +             
Sbjct: 150 PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVETEALETLRGEAGWIDAARLLTPEPEKI 209

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  +    + + +               ++ SDH P
Sbjct: 210 YTWWSYRSPNWELANKGRRLDHAWVSPDLAGTVRKVAVFH-------AARGWEKPSDHVP 262

Query: 298 ISIDYD 303
           +++  +
Sbjct: 263 VTLSLE 268


>gi|295676960|ref|YP_003605484.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
 gi|295436803|gb|ADG15973.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
          Length = 283

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/302 (9%), Positives = 82/302 (27%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V++ +WN+N+L                      +  +  +   D++ LQE          
Sbjct: 26  VKIATWNVNSL----------------KVRQQHVIDWLASSGTDVLCLQE---------- 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +    +    +  + +  +    + +S  +      F     R
Sbjct: 60  LKLPDEKFPRAELEAVGYRSWYAGQKTYNGVGILVREGVNVDESSIVRNIP-GFEDPQQR 118

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + ++  +  +     + +  Y        +    L DW+  +     
Sbjct: 119 VIAATV-----DGVRIISAYFPNGQAPGTDKFAYK------LRWLDALHDWLATEMTLHP 167

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
              + GD+N        +D      + +   +            L+   ++ + +     
Sbjct: 168 KLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAFVRLIGLGLLDAFRQFEQQEKIYS 227

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++ +                + D +  +  + SDH P+  
Sbjct: 228 WWDYRMMAFRRNAGLRIDHILLSKALSDICKAC-------DIDKVPRKWDQPSDHAPVFA 280

Query: 301 DY 302
             
Sbjct: 281 QL 282


>gi|50289263|ref|XP_447062.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74609806|sp|Q6FRT2|CCR4_CANGA RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|49526371|emb|CAG59995.1| unnamed protein product [Candida glabrata]
          Length = 873

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 88/324 (27%), Gaps = 39/324 (12%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
             +   ++S+N      +  +      +           L++   N + DI+ LQE+ + 
Sbjct: 534 QKKSFTMLSYNTLCQHYATPKMYRYTPSWALSWDYRREKLKEQILNFNTDIICLQEVEAK 593

Query: 77  --YNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
              +    +  K+ +  +F++  R      +DS          +    ++L +       
Sbjct: 594 TFEDFWQPLLEKHGYTGLFHAKTRAKTMQSKDSKKVDGCCAFYKTSKFKMLFKECVDFSG 653

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLK-----SFCFLDSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + ++              + +  +       + + Q 
Sbjct: 654 LWMKHKKFQRTEDYLNRAMNKDNVAIVMKLQHIQSGEIMWLVTTHLHWDPKFNDVKTFQV 713

Query: 189 QWLKDWITQKKES--------LVPFVIAGDFNRKINYLGN--------------NDDFWK 226
             L D +    +           P VI GD N  ++                   D  + 
Sbjct: 714 GVLLDHMETLLKEQNPKQDVKKYPLVICGDLNSYLSSSVYELFSTGRVQHHHDGKDRDFG 773

Query: 227 TIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILY 280
               ++       +    C       N        IDY     Q      +         
Sbjct: 774 YFSEDNFSHNLALKSSYNCIGELAFTNFTPSFTDVIDYIWFSSQALRVRGLLGEVDSEYV 833

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
           +        K  SDH P+   Y+F
Sbjct: 834 SNFIGFPNDKFPSDHIPLLGRYEF 857


>gi|163941424|ref|YP_001646308.1| exodeoxyribonuclease III Xth [Bacillus weihenstephanensis KBAB4]
 gi|229012920|ref|ZP_04170085.1| Exodeoxyribonuclease [Bacillus mycoides DSM 2048]
 gi|163863621|gb|ABY44680.1| exodeoxyribonuclease III Xth [Bacillus weihenstephanensis KBAB4]
 gi|228748174|gb|EEL98034.1| Exodeoxyribonuclease [Bacillus mycoides DSM 2048]
          Length = 252

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NPEGYYTYW-----------NYAVKKGYSGTAIFTKKEPISVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L +          
Sbjct: 92  -----VITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRAYIKRLNE--------KK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V  GD N                   +     + +        +  +      +  A 
Sbjct: 139 SVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTRTLEEGFVDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +                SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKIN-----------SEIMGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|152969375|ref|YP_001334484.1| putative DNase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238893840|ref|YP_002918574.1| putative DNase [Klebsiella pneumoniae NTUH-K2044]
 gi|150954224|gb|ABR76254.1| putative DNase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238546156|dbj|BAH62507.1| putative DNase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 253

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 80/291 (27%), Gaps = 49/291 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    + +++ N +                        LR   +++ ADIV LQE+   
Sbjct: 4   PTAGFSLNVLTINTHKGFTAFNRRF----------ILPELRDAVRSVSADIVCLQEVMGA 53

Query: 78  NAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           + V  +    +P  T   F +     +++        + H   AV  +            
Sbjct: 54  HEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----YYE 108

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               S      R  +   +      I +  I +      D               Q   L
Sbjct: 109 NRDISVGNGEKRGLLYCRIVPPRSGITIHVICVHLGLRADQ-----------RQAQLTML 157

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            +W+     +  P V+AGDFN               ++       F + +          
Sbjct: 158 AEWVNT-LPAGEPVVVAGDFNDWRQQANQPLKAQAGLEE-----IFTRARGRPARTFPVS 211

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + +D   +           +  +            + LSDH P+S++ 
Sbjct: 212 FPLLRLDRIYVKNAHASRPKALALKQ-----------WRHLSDHAPLSVEI 251


>gi|238928084|ref|ZP_04659844.1| exodeoxyribonuclease III Xth [Selenomonas flueggei ATCC 43531]
 gi|238884044|gb|EEQ47682.1| exodeoxyribonuclease III Xth [Selenomonas flueggei ATCC 43531]
          Length = 250

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 78/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VSWN+N L         ++                + LDAD   LQE         +
Sbjct: 1   MRFVSWNVNGLRAALKKGFMES---------------FRELDADAFCLQETKMQEG-QAI 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++ +     +          +  A+  +   +       + A D+  R    
Sbjct: 45  LDLPGYEQYFYSAEKKGY----------SGTAIFTRVKPLSVAYGIGISAHDNEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +    ++++ ++  +                         + ++     +  
Sbjct: 91  -----VITMEFDDVYLVTVYTPN-------AKRALERLDYRMMWEDAFRAFL-LGLRAKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +     +  F      R  A 
Sbjct: 138 PVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFTELLQAGFIDTFRALYPDRTGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++       +        ++            SDHCP+S
Sbjct: 198 TWWSYLRHARETNAGWRIDYFLVSAELRDRIAAAEIHADIF-----------GSDHCPVS 246

Query: 300 IDY 302
           +  
Sbjct: 247 LTL 249


>gi|198276716|ref|ZP_03209247.1| hypothetical protein BACPLE_02915 [Bacteroides plebeius DSM 17135]
 gi|198270241|gb|EDY94511.1| hypothetical protein BACPLE_02915 [Bacteroides plebeius DSM 17135]
          Length = 252

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                       R     LDAD   LQE          
Sbjct: 2   IKLISWNVNGLRACCDKGF---------------RDIFTQLDADFFCLQETKMQEG-QLD 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K+  +       +   D   R    
Sbjct: 46  LSFEGYTSYWNYAEKKGY----------SGTAIFTKHQPLQVTYGLGIDEHDHEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +        +             Q L            
Sbjct: 92  -----VITLEMEKFFLVTVYTPNSQDGLKRLDYRMTWDDDFRAYLQKLDQ--------SK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + ++ +     +  F      + N  
Sbjct: 139 PVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQLLLDAGFIDTFRYFYPEQTNIY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+   +    L +      ++            SDHCP+ 
Sbjct: 199 SWWSYRFKAREKNAGWRIDYFLASASLADKLKEAKIHTEIF-----------GSDHCPVE 247

Query: 300 IDYD 303
           +  +
Sbjct: 248 VTVE 251


>gi|16800960|ref|NP_471228.1| hypothetical protein lin1894 [Listeria innocua Clip11262]
 gi|16414395|emb|CAC97124.1| lin1894 [Listeria innocua Clip11262]
 gi|313623313|gb|EFR93545.1| exodeoxyribonuclease III [Listeria innocua FSL J1-023]
          Length = 251

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 83/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y + +DADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +                        + +++    +   
Sbjct: 91  -----VITLEFEDFYMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|327481832|gb|AEA85142.1| exodeoxyribonuclease III [Pseudomonas stutzeri DSM 4166]
          Length = 263

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++ ++NIN                   +    L ++ +    D+V LQE+ + +A  
Sbjct: 2   DRLKIATFNING----------------IRARLPNLLEWLEREQPDVVCLQELKAQDA-- 43

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                          R   +            +A+  ++   L+    L G  D      
Sbjct: 44  --------DFPIDDIRGAGYGAIWHGQKSWNGVAILARDSEPLEIRRGLPGDPDDSHSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV  ++        V  ++L +       +  Y  +        + L +       S
Sbjct: 96  LEAAVHGVI--------VASLYLPNGNPQPGPKFDYKLA------WFERLIEHAAGLLAS 141

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+AGD+N                           ++ +           +      
Sbjct: 142 GHPVVLAGDYNVVPTDEDIYNPRSWRKDALLQPESRACYERLLAQGWTDALRAQFPDEPV 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ ++  +    L            D      +  SDH P 
Sbjct: 202 YTFWDYFRQHWQKNSGLRIDHLLLSPDLAPCLQAAGV-------DRWVRGQEHASDHAPT 254

Query: 299 SIDY 302
            +  
Sbjct: 255 WVSL 258


>gi|197106478|ref|YP_002131855.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
 gi|196479898|gb|ACG79426.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
          Length = 256

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 79/303 (26%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI+                        L ++      D+V LQE+ + +A+   
Sbjct: 1   MRIATYNISN----------------VVKRLPNLLEWLDERRPDVVCLQELKAADAL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  +    +   Y L G          R
Sbjct: 42  -------FPQAELEAAGYGAVWQGERTWNGVAILARGAEPVATRYGLPGDPTD------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           +A  +   +NG  + V  I+L +       +  Y  +          L         S  
Sbjct: 89  QARYVEAAVNG--VLVASIYLPNGNPQPGPKFAYKLA------WFDRLIAHAEGLVASGA 140

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P  +AGDFN     L                     W+ +                   +
Sbjct: 141 PVALAGDFNVVPTALDIYRVKPHTTDALQQPQTRAAWRRLLDQGWTDAVRALHPDAPMFS 200

Query: 249 KNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +        + +D  ++  +    L            D         SDH P+ I
Sbjct: 201 FWDYLRNAWDRDAGMRLDAVLLSPSLAPRLRAAGV-------DRDVRGRPGASDHAPVWI 253

Query: 301 DYD 303
           + D
Sbjct: 254 ELD 256


>gi|167763965|ref|ZP_02436092.1| hypothetical protein BACSTE_02348 [Bacteroides stercoris ATCC
           43183]
 gi|167698081|gb|EDS14660.1| hypothetical protein BACSTE_02348 [Bacteroides stercoris ATCC
           43183]
          Length = 344

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/351 (10%), Positives = 81/351 (23%), Gaps = 59/351 (16%)

Query: 1   MIRKYVL-ALVFFLVPCTASVAQKVRL---VSWNINTLSEQ------------EGVSLWK 44
           M R+ +L A +   +        K+R+     +N+  L +                  ++
Sbjct: 1   MNRRLILSAFLVLCLSTGLLAQGKLRVYAAAFYNLENLWDTEDNPDNPGDDDFTPGGKYE 60

Query: 45  NSVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
            +  +       + +    L  D       I+ + E+ +   +  +          S   
Sbjct: 61  WTQVKYEQKLQNVAKVISQLARDYCPAGPAIIGISEVENKKVLEDLVKTEP---IASLGY 117

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
            I H +   +  I  A     +    +          D       R  + +   + G+  
Sbjct: 118 RIVHFESPDHRGIDVAALYNPRLFTFVSARTYPFAKPDMPGYK-TRDQLLVSGILAGEPF 176

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            ++  H  S             +  +    A  L              +I GD N   + 
Sbjct: 177 HMIVNHWPSRYGGSKSSPLREFAAGITRHIADSLHA-----DNPQAKVIIVGDMNDDPDN 231

Query: 218 LGNNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
              +         + + P        K  +    +          D  ++  N       
Sbjct: 232 KSCSQVLGAVKSIREVKPGGYYNATWKLFEQGIGSLCYQNQWNLFDQQIVSGNLIGKDRS 291

Query: 273 -------------------ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                                +           +     SDH P      +
Sbjct: 292 TLKFWKSEVFNRPFLIQQEGKYKGYPLRTFSGTTFQNGYSDHLP---TLTY 339


>gi|208222|gb|AAA72974.1| pancreatic DNAase I [synthetic construct]
          Length = 261

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 92/285 (32%), Gaps = 30/285 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +++ ++NI T  E         S     +  + + +  +    DIV +QE+   + VA  
Sbjct: 2   LKIAAFNIRTFGE---------SKMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVG 50

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+          +   +++     ++         R   V VL       G +   + + 
Sbjct: 51  KLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSF 110

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R    +    +  K+    I        D++    S     L  Q +W  +        
Sbjct: 111 SREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN-------- 162

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               ++ GDFN   +Y+ ++      +  + +      +       + N       D  V
Sbjct: 163 --DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIV 216

Query: 262 MDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303
           +  +  +  ++  S +   +      S      +SDH P+ +   
Sbjct: 217 VAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 261


>gi|119716549|ref|YP_923514.1| endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614]
 gi|119537210|gb|ABL81827.1| Endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614]
          Length = 929

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 88/355 (24%), Gaps = 72/355 (20%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGV--------------------------SLWKNSV 47
                +V   +RL ++N+       G                               +  
Sbjct: 478 TAAPEAVGGDIRLATFNVLNYFPTTGADYEAAGLGTCTYYNDRAGNHITVNRCGTDASPG 537

Query: 48  KRTTSD-------YTLLRQYAKNLDADIVFLQEMGSY---------------NAVAKVFP 85
            R  +D          +     NL A IV L+E+ +                +A+     
Sbjct: 538 PRGAADDVNLQRQQAKIVAAIDNLGASIVSLEEIENSVKFGLDRDYAVSTLVDALNAAAG 597

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA-KDSFSRAGNRR 144
              W    S +     +     + I TA   +  +V ++  S+ L G+   + +R    +
Sbjct: 598 SGVWAYAPSPDAADLPT-VAEQDVIRTAFIYKPADVSLVGPSHVLTGSAAFADAREPLAQ 656

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SL 202
             +     +     V+  H KS             +      QA+ L D+  Q       
Sbjct: 657 GFKATGAPDADAFLVIVNHFKSKGSGVDDGTGQGNANPDRIAQAEALSDFAIQVAAGLDT 716

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
               + GDFN           +                 D              +D+ + 
Sbjct: 717 DAVFLTGDFNSYTQEDPLQVLY------GAGYDNLESTTDPEETTYSFDGLAGSLDHVLA 770

Query: 263 DQNAYKFLIQESFSEILYN--------------EDDIKSRGKRLSDHCPISIDYD 303
              A   +       I  +               D       R SDH P  +  D
Sbjct: 771 SPAAAAMVTGVDIWNINADESIAFEYSRYNYNATDFYAPGPYRASDHDPEVVGID 825


>gi|159029855|emb|CAO90909.1| xthA [Microcystis aeruginosa PCC 7806]
          Length = 262

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 94/307 (30%), Gaps = 73/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                   S    +  + +    +++ LQE  +   +   
Sbjct: 1   MKIATWNVN----------------SIRSRQDQVINWLQLNPVEVLCLQETKVIDRDFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSR 139
           + F    + ++ S                +  +A+  +     +     P++G   +   
Sbjct: 45  EAFESLGYHLYIS------------GQKAYNGVAIFSQKPLDDITVGFSPIIGENLTGEL 92

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              +R +  ++      I ++++++ +   LDS +  Y        +  + L+ ++ +  
Sbjct: 93  DEQKRLITGVI----GDIRIINLYVPNGSSLDSDKYIYK------LKWLETLRKYLDKII 142

Query: 200 ES-LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSR 244
            S      I GDFN  +      D   K                     L    ++  S 
Sbjct: 143 NSQPQELCICGDFNIALEDKDIYDPKGKENHIMSSAKEREALEKVLEIGLQDAFRKFTSA 202

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           ID+  +    Y+  +           D    + ++ SDH
Sbjct: 203 AGHYSWWDYRSGGFARNRGWRIDHLYLTPQLYEKAVNCLI-------DREPRKQEKPSDH 255

Query: 296 CPISIDY 302
            P+ ++ 
Sbjct: 256 TPVILEI 262


>gi|158421717|ref|YP_001523009.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571]
 gi|158328606|dbj|BAF86091.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571]
          Length = 290

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/325 (9%), Positives = 84/325 (25%), Gaps = 69/325 (21%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           ++  L+   A  A  + + +WNIN                       ++++  + L  D+
Sbjct: 4   ILTCLLLPPAVAALSLTVCTWNIN----------------SVRIRLDIVKETVERLKPDV 47

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + LQE    +    +          +   L       +       +A   K      +  
Sbjct: 48  LCLQETKCQDDKFPLA---------AIRELGFPHIALNGQKGWHGVATFSKRPFDAIEKQ 98

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCS-LL 184
              G  D+         + + +   G     + + + ++ +     + E     +     
Sbjct: 99  EFCGKGDARH-------IAVTLGGAGGLSAPVTIHNFYIPAGGDEPNPEVNPKFAHKLAF 151

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------------NYLGNNDDFWKTID 229
             +A   +      + +    ++ GD N                  ++     D      
Sbjct: 152 LDEAIAWEKLTEAGRPAGAHAILVGDLNIAPLETDVWNHKQLLSVVSHTPVEVDLLTRFQ 211

Query: 230 PNDSLIRFPKEKDSRC-NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEI 278
                I   +E              +            +D+    ++        +    
Sbjct: 212 AAGPWIDVMREFVPPTEKLFTWWSYRSPDHTVNDRGRRLDHVWTSRSLAGKAKAMTV--- 268

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
                      ++ SDH P+++ ++
Sbjct: 269 ----LKEARSWEKPSDHVPVAVTFE 289


>gi|241766910|ref|ZP_04764717.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
 gi|241362633|gb|EER58476.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
          Length = 290

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 85/315 (26%), Gaps = 66/315 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------- 74
           LV+WN       +GV     S +R       L  +      D++ LQE+           
Sbjct: 3   LVTWNTQWCCGLDGVV----SPQRIVQHARALADF------DVLCLQEIAVHYPALEGNA 52

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                  +  + P        + +                   +  +   +  Q +PL  
Sbjct: 53  GHDQVALLRALLPGYQVFFGAAVDEWTP-----DGQRQRFGNLIATRLPVLQLQHHPLPY 107

Query: 133 AKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             D+  R+  R      V   G   + V+  HL+ +     +    + +  +L  QA   
Sbjct: 108 PADAGVRSMPRMCTVATVRDPGLGAVRVMTTHLEFYSKRQRM--AQARALRVLHAQACAH 165

Query: 192 KDWITQKKESLVPF---------VIAGDFNRKINYLG-------------NNDDFWKTID 229
                +      PF         V+ GDFN + +                        + 
Sbjct: 166 AVAPPEASGDGSPFQSKAHTPHAVLCGDFNFEPHEPEHAAICAPAGADDSEGAPLGMRLW 225

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +  L+     +              P   D+  +  +    + +            +  
Sbjct: 226 DSWRLLHAAAPQPPTFRLYDRRYGPEPGSCDFVFVSDSLKGRVQR-----------FVVD 274

Query: 288 RGKRLSDHCPISIDY 302
              + SDH P+++  
Sbjct: 275 AATQASDHQPVAVSI 289


>gi|126335204|ref|XP_001363714.1| PREDICTED: similar to reverse transcriptase/ribonuclease H/putative
           methyltransferase [Monodelphis domestica]
          Length = 282

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 82/284 (28%), Gaps = 30/284 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +R+ ++NI +  E               +    + +       DI  +QE+     VA  
Sbjct: 23  LRIAAFNIRSFGEN---------KMSNDTISDYIVRILNQY--DIALVQEVRDKYLVAVG 71

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+  K       S   + +     ++         R   V VL   Y   G     +   
Sbjct: 72  KLLDKLNRETSNSYHFVASEPLGRNSYKERYLFVFRPDKVSVLDSYYYDDGCTPCGNDTF 131

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R  V +        +    I        D++    +     L  + +W          +
Sbjct: 132 SREPVVVKFSSPTTVVKEFVIVPLHAAPKDAVSEIDALYDVYLDVRLRW----------N 181

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
           +   +  GDFN   +Y+  +      +  + +      +         +       D  V
Sbjct: 182 MEDIMFMGDFNADCSYVTPSQWPSIRLRTSSTFQWLIPDTADTTVTPTDCAY----DRIV 237

Query: 262 MDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
           +        ++  S +   +      S G  L  SDH P+ +  
Sbjct: 238 VSGRKLQSAIVPGSATIFDFQAAYNLSSGIALAISDHYPVEVTL 281


>gi|332884883|gb|EGK05138.1| hypothetical protein HMPREF9456_03051 [Dysgonomonas mossii DSM
           22836]
          Length = 290

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 98/319 (30%), Gaps = 47/319 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++KY+++ V F +      AQ   + ++N+   +  +  ++WK+        +  + +  
Sbjct: 1   MKKYLISAVLF-IAALTLNAQNFNVGTYNVRNDNSSDVGNMWKD-------RFPYIAKLI 52

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +  D D    QE               +  +    R  N     S             N 
Sbjct: 53  QYHDFDFFGTQEALPNQLKDMKIALPGYDYYGEG-RDGNRQGEHSAIFYKIDKYRLLSNG 111

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP 179
                + P + +K   +   NR    + ++   +GK  +V   H          +   + 
Sbjct: 112 DFWLSATPDVPSKSWDAPCCNRICTWVELQDIKSGKSFFVFSAHYDY-----EKDYARNE 166

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           S  L+  + + +            P +  GD N  +N          +    D+      
Sbjct: 167 SSKLILTKIKEIA--------GDNPVIFMGDLNGGMNSSWA-QLLNNSGVLRDTYCDVEH 217

Query: 240 EKDSRCNANKNLRN--------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
              +  + N   +                  +D+    ++            +L +  +I
Sbjct: 218 PYANNSSYNAWGKPLEELDNLDRAIISTNEILDHIYFSKHFKTKR-----WGMLTDTYNI 272

Query: 286 KSRGKRLSDHCPISIDYDF 304
              GK  SDH PI ++ ++
Sbjct: 273 ---GKFPSDHFPILVNAEW 288


>gi|163754356|ref|ZP_02161478.1| hypothetical protein KAOT1_15713 [Kordia algicida OT-1]
 gi|161325297|gb|EDP96624.1| hypothetical protein KAOT1_15713 [Kordia algicida OT-1]
          Length = 348

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/351 (11%), Positives = 88/351 (25%), Gaps = 57/351 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVR------LVSWNINTLSEQEGVSLWKN--------- 45
           M     L  + FLV    + AQK +      +  +N+  L +     L  +         
Sbjct: 1   MKNLKSLVFLAFLVVSVQAWAQKKKQYKVQTIAFYNVENLFDTINDPLKDDEKSPIMEIQ 60

Query: 46  --SVKRTTSDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTE 96
               K      + L +   ++  DI       + + E+ +   +  +            +
Sbjct: 61  GDRSKIYKDKISKLARVISDIGYDIAKTSPAILGVAEIENRQVLEDLVNDPKLK---DAD 117

Query: 97  RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
             I H        I   +  ++   +    S   L   D   R   R  + +   ++ ++
Sbjct: 118 YGIIHFDSPDKRGIDVGLLYKQGVFQPHSFSKHPLYIYDGDKRIYTRDQLLVSGVLDDEE 177

Query: 157 IWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
           + ++  H  S    ++        +  L       L+D      +        GD N   
Sbjct: 178 VHIIVNHWPSRRGGEARSRPKRVKAAELNKHIIDSLQD-----IDKKAKIFTMGDMNDDP 232

Query: 216 NYLGNNDDFWKTIDPN-----DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF- 269
             +   +      D +     D          +              D  +      K  
Sbjct: 233 FNVSMKEVLKTKEDRDEANGKDLFNPMEGMARNGNGTLAYRDGWNLFDQIIFTAPLLKKD 292

Query: 270 ------------------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                               +  +    +      S     SDH P+ +  
Sbjct: 293 FTEYRYYKAGIYNKVYLSNKRGRYKGYPFRSFAGGSYTGGYSDHFPVYVHL 343


>gi|149926631|ref|ZP_01914891.1| predicted endonuclease / exonuclease / phosphatase family protein
           [Limnobacter sp. MED105]
 gi|149824560|gb|EDM83776.1| predicted endonuclease / exonuclease / phosphatase family protein
           [Limnobacter sp. MED105]
          Length = 264

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 85/298 (28%), Gaps = 58/298 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI+                        LR+    ++AD+VFLQE+   +     
Sbjct: 3   LRIATYNIHKGVMGLRKPALT---------IHALREQIHAMNADLVFLQEVQGRHDRHAG 53

Query: 84  ------------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
                                +      S +    +      +  H   A+  +      
Sbjct: 54  KFEHWPEGGQHEFLAQSPSAIDDLLGHASQQYFTAYGMNAVYSHGHHGNALLSRYEIE-- 111

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
               +L    S  R   R  +   V+     I  +  H                      
Sbjct: 112 ---WMLNQDVSDHRLEQRGLLHCCVKTPAGPIHAMVAHFGLLY-------------RSRV 155

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +QA  L + +     + +P V+AGDFN     LG      + +   + +    K + +R 
Sbjct: 156 RQASKLIEHVGTHVPAGMPLVVAGDFNDWQRRLGP--ILQQGLKAEEVMPLDKKNRLARV 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +  +    + +D                F           +   +LSDH P  +D +
Sbjct: 214 GSFPSRFPVLGLDRVFARG----------FKVHEATVLHGPA-WAKLSDHAPFVVDLE 260


>gi|42565714|ref|NP_566904.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|53828525|gb|AAU94372.1| At3g48425 [Arabidopsis thaliana]
 gi|55733769|gb|AAV59281.1| At3g48425 [Arabidopsis thaliana]
 gi|332644894|gb|AEE78415.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Arabidopsis thaliana]
          Length = 364

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/337 (13%), Positives = 97/337 (28%), Gaps = 87/337 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + ++WN N+             + R  +D++   ++  + D D++ +QE+    A  K  
Sbjct: 44  KFMTWNANSF------------LLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGGKGK 91

Query: 85  PKNTWCI----------------FYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQS 127
           PKN   +                  S+    N+    S  +  +   A+  K     ++ 
Sbjct: 92  PKNHEELSDDTKVLREEKQILTRALSSPPFGNYGVWWSLADSKYAGTALLVKKCFKPRKV 151

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y  L    S      R  +        +   +L+ +  +     +       +     + 
Sbjct: 152 YFNLDKLASKHEPDGRVILA-----EFETFRLLNTYSPN-----NGWKDEENAFQRRRKW 201

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY------------------------------ 217
            + + +++   K S  P +  GD N                                   
Sbjct: 202 DKRIVEFLN--KTSDKPLIWCGDLNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGF 259

Query: 218 -LGNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYFVMDQNA 266
                  F  TI     +  +               S     K    ++ IDYF++ +  
Sbjct: 260 TPSERGRFGATIKEGRLVDAYRYLHKEQEMESGFSWSGNPIGKYRGKRMRIDYFLVSEQL 319

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++           +     G   SDHCP++++  
Sbjct: 320 KDRIVSCKMHGRGIELE-----GFHGSDHCPVTLELS 351


>gi|119492055|ref|XP_001263522.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya
           fischeri NRRL 181]
 gi|119411682|gb|EAW21625.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya
           fischeri NRRL 181]
          Length = 606

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 85/346 (24%), Gaps = 74/346 (21%)

Query: 6   VLALVFFLVPCTASVAQKV---------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + AL       TA+    +          + S+N+N L+               ++    
Sbjct: 272 LTALTVTGSNTTAAAPTDLESAGTCGGVTVGSYNVNNLAPN-------------STTLPK 318

Query: 57  LRQYAKNL--DADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTER 97
           + Q+         +VFLQE+   N                              F     
Sbjct: 319 IAQHIAQYLKSPTLVFLQEIQDDNGPTDDGVVSANKTLSTLVQSIADQGGIEYSFVDIAP 378

Query: 98  LINHSKRDSNNDIHTAIAV------------------RKKNVRVLQQSYPLLGAKDSFSR 139
           +          +I                         +       +  P L    + + 
Sbjct: 379 VNKEDGGQPGGNIRVGYLYDPSVIRLRNANPGSNTDVNEVLPGAELKFNPGLIDPSNDAW 438

Query: 140 AGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKD 193
             +R+ +    E      K + +++H  S     S+E    P      +    QA+ + +
Sbjct: 439 EDSRKPLAAAWETLDGKNKFFTVNVHFTSKGGGSSIEGDARPPVNGGVATRKAQAKLVAE 498

Query: 194 WITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           + +           + +GDFN             +       L        +        
Sbjct: 499 FTSSILAEDSSAKIIASGDFNEFAFAQPIETFLAE--SGLKDLDEVAGIAATERYTYLYD 556

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            N   +D+  +     K            + +   S   + SDH P
Sbjct: 557 MNCQQLDHMFVSPALAK-----GAEMHHLHVNTWVSYDDQASDHDP 597


>gi|114798068|ref|YP_760636.1| exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444]
 gi|114738242|gb|ABI76367.1| exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444]
          Length = 258

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 81/304 (26%), Gaps = 71/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    + Q   +++AD+V LQE+         
Sbjct: 1   MRIATWNVN----------------SMKARLQTVLQVLTDINADVVCLQELKCETDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y     +  +        +  +A+  K                +      R
Sbjct: 42  -------FPYLEIEELGWNCAVHGQKSYNGVALLSKFPLQDVTR-----EMSTLKDDQAR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    K + V  ++L +       +  Y        +    L+D      ++  
Sbjct: 90  YIEATVLT--DKPVRVGGLYLPNGNPAPGPKYDYK------LEWVAALEDHARSLLKAEE 141

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PFV+ GD+N                    L      W+ +  +  L    +  D R +  
Sbjct: 142 PFVLCGDYNAIPAPEDCWDDTVWNTDALGLPETRAAWRQLK-HLGLTDAFEVCDGRAHQY 200

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +        L                    + SDH P+ 
Sbjct: 201 TFWDYQGGAFQKDHGIRIDHILACPRMTDRLTA-------IEIYRKARAMDKPSDHVPMI 253

Query: 300 IDYD 303
             ++
Sbjct: 254 AIFE 257


>gi|77919973|ref|YP_357788.1| exonuclease III [Pelobacter carbinolicus DSM 2380]
 gi|77546056|gb|ABA89618.1| Exodeoxyribonuclease III [Pelobacter carbinolicus DSM 2380]
          Length = 276

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 83/312 (26%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+N+N                   +    LR    N   +I+ +QE    +A    
Sbjct: 1   MKIVSFNVNG----------------IRARLHQLRAVIDNHSPEIIGVQETKVTDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +         H  +A+  +   V        G       A  R
Sbjct: 41  ------DFPVDAIRELGYHVEYHGQKSHYGVALLSRQAPVQVVK----GLPGDAQDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                    +G+ +WV +       F       +        +  + L D++  +     
Sbjct: 91  LIGAAYETEHGEPLWVFNA-----YFPQGESRQHPTKYPGKERFYRELGDFLESRFSPEA 145

Query: 204 PFVIAGDFNR---------------------KINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                      K ++L    D+ + +     +  F + + 
Sbjct: 146 DLIVMGDANVAFRDEDIGIGQDNAKRWLRTGKCSFLPEERDWLRRLFDWGLVDTFRQSRS 205

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                      +             ID  +  Q   +              D      ++
Sbjct: 206 DAAELFSWFDYRSRGFEKDPRRGLRIDLILATQVLSRRCSGSGI-------DYGIRGMEK 258

Query: 292 LSDHCPISIDYD 303
            SDHCPI  + D
Sbjct: 259 PSDHCPIWAEVD 270


>gi|289768186|ref|ZP_06527564.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289698385|gb|EFD65814.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 293

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 90/315 (28%), Gaps = 65/315 (20%)

Query: 8   ALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           AL+   V    ++A        +R+ ++NI+  +  +GV            D        
Sbjct: 16  ALLTLAVTAQPALAADRGHSVPLRIATYNIHAGAGSDGVF-----------DLDRQAAAL 64

Query: 62  KNLDADIVFLQEMGSYNAVA--------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           + LDAD++ LQE+  +            ++  +    + ++    ++          +  
Sbjct: 65  RALDADVIGLQEVDVHWGARSQGLDLAGELARRLGMRVSFAPIYSLDPVTAGEPRREY-G 123

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFL 170
           +AV  +       ++ +              A    E+ +++ G  + V   HL      
Sbjct: 124 VAVLSRFPVRSATNHEITRLSTQDENPLPAPAPGFGEVTLKVRGVPVQVFVTHL------ 177

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTI 228
                 Y    ++   Q    +  + +++         + GDFN +          WK +
Sbjct: 178 -----DYRADPAVRRAQVADTRRIMARERAELPGAHQFLLGDFNAEPA-APELAPLWKEL 231

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
               +         +             IDY    ++                       
Sbjct: 232 SDAGAGTPATYPAQAPVK---------RIDYVTAGKDVRIRRTAV-------------PE 269

Query: 289 GKRLSDHCPISIDYD 303
               SDH P+  D  
Sbjct: 270 EPAASDHRPVVADVS 284


>gi|493974|pdb|1DNK|A Chain A, The X-Ray Structure Of The Dnase I-D(Ggtatacc)2 Complex At
           2.3 Angstroms Resolution
 gi|494766|pdb|2DNJ|A Chain A, Dnase I-Induced Dna Conformation. 2 Angstroms Structure Of
           A Dnase I-Octamer Complex
 gi|82407663|pdb|2A3Z|B Chain B, Ternary Complex Of The Wh2 Domain Of Wasp With Actin-Dnase
           I
 gi|82407666|pdb|2A40|B Chain B, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
           I
 gi|82407669|pdb|2A40|E Chain E, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
           I
 gi|82407672|pdb|2A41|B Chain B, Ternary Complex Of The Wh2 Domain Of Wip With Actin-Dnase
           I
 gi|82407675|pdb|2A42|B Chain B, Actin-Dnase I Complex
 gi|116666965|pdb|2D1K|B Chain B, Ternary Complex Of The Wh2 Domain Of Mim With Actin-Dnase
           I
 gi|157836798|pdb|3DNI|A Chain A, Crystallographic Refinement And Structure Of Dnase I At 2
           Angstroms Resolution
 gi|170785263|pdb|3CJC|D Chain D, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
           Complexed With Dnase I And Gelsolin-Segment 1
 gi|240684|gb|AAB20621.1| deoxyribonuclease I, DNase I [cattle, pancreas, Peptide, 260 aa]
 gi|248467|gb|AAB22021.1| deoxyribonuclease A [cattle, pancreas, Peptide, 260 aa]
          Length = 260

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 91/285 (31%), Gaps = 30/285 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +++ ++NI T  E               +  + + +  +    DIV +QE+   + VA  
Sbjct: 1   LKIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVG 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+          +   +++     ++         R   V VL       G +   + + 
Sbjct: 50  KLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSF 109

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R    +    +  K+    I        D++    S     L  Q +W  +        
Sbjct: 110 SREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN-------- 161

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               ++ GDFN   +Y+ ++      +  + +      +       + N       D  V
Sbjct: 162 --DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIV 215

Query: 262 MDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303
           +  +  +  ++  S +   +      S      +SDH P+ +   
Sbjct: 216 VAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 260


>gi|75759849|ref|ZP_00739924.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228902244|ref|ZP_04066404.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 4222]
 gi|228966664|ref|ZP_04127710.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74492665|gb|EAO55806.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228793040|gb|EEM40596.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228857359|gb|EEN01859.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 4222]
          Length = 252

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 84/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQSGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEGYYTYW-----------NYAVKKGYSGTAIFTKKEPLSVTYGLEIEEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  +++ ++  +        +             + L        +   
Sbjct: 93  ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +      +  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYSDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|229544130|ref|ZP_04433189.1| exodeoxyribonuclease III [Bacillus coagulans 36D1]
 gi|229325269|gb|EEN90945.1| exodeoxyribonuclease III [Bacillus coagulans 36D1]
          Length = 251

 Score = 89.2 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N L                         +    DADI  +QE     A    
Sbjct: 1   MKFVSWNVNGLRACVKKGF---------------LAFFAETDADIFCVQETK-LQAGQIA 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++           +    ++  AV  K   +  +     G  +  +    R
Sbjct: 45  LDLDGYYQYWN----------YAERKGYSGTAVFTKKEPLSVR----YGVGEDRTEPEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++++++  +     +           +      L        +   
Sbjct: 91  I-----LTLEYEDFYLVNVYTPNSQRDLARLGYRLEWEDRMRAYLTEL--------DKKK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                        +  +  +  F      R  A 
Sbjct: 138 PVIVCGDMNVAHQEIDLKNAKNNVGNSGFTAEERGKMTGLLNSGFIDSFRYFYPEREGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     L            D         SDHCP+ 
Sbjct: 198 TWWSYMNKVRERNIGWRIDYFLVSKRLAGRLK-----------DAGMYPEIMGSDHCPVF 246

Query: 300 IDYDF 304
           ++ +F
Sbjct: 247 LETNF 251


>gi|50084486|ref|YP_045996.1| putative extracellular nuclease [Acinetobacter sp. ADP1]
 gi|49530462|emb|CAG68174.1| putative extracellular nuclease [Acinetobacter sp. ADP1]
          Length = 807

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 89/328 (27%), Gaps = 54/328 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMGS 76
            Q +R+ ++N+             +    T +++      +    K ++AD+  L E+ +
Sbjct: 461 GQNIRVAAFNVLNYDNGAEKGFPTDRGATTATEFSRQHQKIVTALKAINADVYGLMEIAN 520

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                K              + I      R  ++ I   I    K V+ +  +       
Sbjct: 521 NGYDEKSAIAYLTKSLGPDWKYITPPNMNRLGSDVIAVGILYNAKRVKPVNAAVVFDDQS 580

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLL 184
                  NR  +    +    GK   V+  HLKS         +                
Sbjct: 581 -----QKNRVTMAQTFQPIHGGKFFTVIPNHLKSKGSCPEDTASTDADQLDGQGCWNPTR 635

Query: 185 SQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
            +  + L  W  +          +  GD N         D        N  ++   ++  
Sbjct: 636 VKAVEQLIQWAAKNPTRVQQPNILFLGDMN----SYAKEDPILAFEKANYKVLLNDEKIG 691

Query: 243 SRCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--- 289
               A                   ID+ + D N Y+F+ +     I  +E          
Sbjct: 692 QGKQAYSYVFGVSSNALGYGGAGNIDHAIADSNLYRFVKRAFVWHINADEPTALDYNEEY 751

Query: 290 --------------KRLSDHCPISIDYD 303
                          R SDH P+ +D D
Sbjct: 752 KTDEQKTLFYADDAYRSSDHDPVIVDLD 779


>gi|23013323|ref|ZP_00053232.1| COG3568: Metal-dependent hydrolase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 330

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/333 (9%), Positives = 107/333 (32%), Gaps = 61/333 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
            +R+ ++N+  L E+    +             ++R   + L ADI+ LQE+ ++ A   
Sbjct: 3   PLRIATFNLENLDERPVGGIDF------EDRLAVMRPQFQRLRADILCLQEVNTHAATKS 56

Query: 80  -------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--- 129
                  + ++     +  +    R+ + ++   +      + +  +      +      
Sbjct: 57  GPRLFTALDRLLAGTQYEGW---PRVHSLNRGGVHPADKHNLVIVSRLPIRSHRQVWHDL 113

Query: 130 -----------LLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTY 177
                           ++ +   +R  +   +E+ G + + V+D+HL++   +       
Sbjct: 114 VPPCAYRPVRADPPPAEAQAVEWDRPILLAELELPGGRALHVIDVHLRAPRAVWLAGQKE 173

Query: 178 S---------------PSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGN 220
                            +    + Q+  ++  + +  ++      V+ GDFN   +  G 
Sbjct: 174 RFGRWLSVGGWAEGYFLAGVKQAGQSLEVRLLVEEIFDADADALVVVCGDFNAGEHEAGM 233

Query: 221 N-------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                   D     +     +       +++  +  +    + +D+ ++ +    + +  
Sbjct: 234 RIIKGDDEDTGNGHLAMRMLVPLERSLPEAQRYSVIHHGRPVMLDHILVSRPLLGWYLGA 293

Query: 274 SFSEILYNEDDIKSRGKRL---SDHCPISIDYD 303
                   ++ +          S H P+  ++ 
Sbjct: 294 EIHNETLGDELVSPALVLAPPQSYHAPVVAEFS 326


>gi|293602541|ref|ZP_06684987.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292819303|gb|EFF78338.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 288

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 87/324 (26%), Gaps = 85/324 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+NI+             S          LR     L  D+VFLQE+   N    +
Sbjct: 4   IRVVSYNIH----------KGRSALGRRDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSL 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  +    + + +    +      A+  +   +  ++  +     S  R   R
Sbjct: 54  LDAQHESLAAALRLDVAYGRNAIRHATDHGNALLSRFPILDHENVDI-----SDHRLEQR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +E++ + +    +HL  F                 ++Q   L + I        
Sbjct: 109 GLLHARIEVDERPVHCFVVHLGLFAGS-------------RTRQVLALTERIRCMVPDGE 155

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243
           P +IAGDFN   + L     F + +   +     P+                        
Sbjct: 156 PILIAGDFNDWNDRLAP--LFVQQLGLYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLP 213

Query: 244 ------------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                                          +     +D         +     S   + 
Sbjct: 214 NGGLSVLERTNQLGMEGSAGLLQPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR 268

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
                      RLSDH P+  + +
Sbjct: 269 ------GREWARLSDHSPLLAELE 286


>gi|116493341|ref|YP_805076.1| exonuclease III [Pediococcus pentosaceus ATCC 25745]
 gi|116103491|gb|ABJ68634.1| Exonuclease III [Pediococcus pentosaceus ATCC 25745]
          Length = 251

 Score = 89.2 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 77/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                           K LDADI  +QE        ++
Sbjct: 1   MKLISWNVNGLRAAVKHGF---------------LDVFKELDADIFCIQETKLQEGQIEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +             +    ++  A+  K   +  +    +   D   R    
Sbjct: 46  ELPHYYQYW-----------NYAEKKGYSGTAIFTKKKPLAVRYGLGIEEHDQEGRI--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +K +V+  +  +                        L            
Sbjct: 92  ------ITLEFEKFYVITCYTPNSQPKLKRLEYRMAWDDAFRAYIDQLNQH--------K 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                         + +  +  +     +     S+    
Sbjct: 138 PVIFCGDLNVAHQEIDLKNDKTNHKNAGFTDEERNKFTQLLNSGFTDTYRYFYPSKEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV  +   + L        ++            SDHCP+ 
Sbjct: 198 SWWSYRFNARANNAGWRIDYFVSSKALDQKLTDAQIHTEIF-----------GSDHCPVE 246

Query: 300 IDYD 303
           +D D
Sbjct: 247 LDLD 250


>gi|255691864|ref|ZP_05415539.1| transmembrane endonuclease/exonuclease/phosphatase family protein
           [Bacteroides finegoldii DSM 17565]
 gi|260622589|gb|EEX45460.1| transmembrane endonuclease/exonuclease/phosphatase family protein
           [Bacteroides finegoldii DSM 17565]
          Length = 378

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 93/331 (28%), Gaps = 81/331 (24%)

Query: 10  VFFLVPCTASVAQK-----------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
                P  +  ++            + + ++N++  + +      K            + 
Sbjct: 85  CVLQFPLFSPASEPIAKLGTYTPGILTVATYNVDAFNHEYMGYSCKG-----------IA 133

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              +NL ADI+ LQE+     +   F  ++ C  +S      +            +AV  
Sbjct: 134 TQMQNLQADILCLQEV----GINSSFNIDSVCAAFSNWPY-QYVPSAPEGKELLQLAVFS 188

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +     Q       +K+          +   +EI G+ I + + HL++     +      
Sbjct: 189 RYPIREQSLITYPDSKNCS--------LWCDIEIPGRTIRLFNNHLQTTEVTRNKRELEK 240

Query: 179 P----------------------SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
                                  +    + QA  LK  I    +S  P ++ GDFN   +
Sbjct: 241 ELYKEDTQKAERAALTLIDGLHENFRKRAGQADVLKQLI---ADSPHPTLVCGDFNSLPS 297

Query: 217 YLGNN-------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
               +        D       N     F           K  ++ + IDY +        
Sbjct: 298 SYVYHTIKGDKKGDKKGNKKGNKLQDGFQTSGHGYMYTFKFFKHLLRIDYVLHSPEL--- 354

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         D  S     SDH P+ +
Sbjct: 355 -----------KSTDYFSPDWSYSDHNPVVM 374


>gi|121716960|ref|XP_001275963.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           clavatus NRRL 1]
 gi|119404120|gb|EAW14537.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           clavatus NRRL 1]
          Length = 344

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 86/316 (27%), Gaps = 27/316 (8%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           LA    L     +    +R+++ NI   + +           R  S    LR   ++ DA
Sbjct: 34  LAASKLLSMMKTTAELPLRILTHNIRY-ATKSPFKGELRWDDRKQSLLNELRFNTRHQDA 92

Query: 67  DIVFLQEMGSYNAVAKVFP--------------KNTWCIFYSTERLINHSKRDSNNDIHT 112
             + LQE+     V  +                   W          + +   S      
Sbjct: 93  -FICLQEVLHNQLVDVLSGLNQQSPPSSNPTPTGQQWTYIGVGRDDGHEAGEYSAILYKP 151

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
           ++   K    V     P   +K  +  A  R     +   +  +  VL ++       D 
Sbjct: 152 SVWQLKHWDSVWLSETPDKPSK-GWDAASIRILTIGVFTHHETRHTVLAMNTHL---DDQ 207

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
              +   +  ++ Q+    +    +  +S+    + GDFN +                 D
Sbjct: 208 GSRSRYEAAKIILQKMDEYRG--GEFSDSIAGVFLTGDFNSQETQEAYGVLTGAESSLAD 265

Query: 233 SLIRFPKE-KDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +                            IDY ++     K   Q    +      +   
Sbjct: 266 TAKVLEPALHYGDHFTWTGFGYEGQDPTRIDYILLGPGKQKEEEQSWRVDGYAVLANRFD 325

Query: 288 RGKRLSDHCPISIDYD 303
            G  LSDH  + +D  
Sbjct: 326 SGVFLSDHRAVVVDVT 341


>gi|319788428|ref|YP_004147903.1| exodeoxyribonuclease III [Pseudoxanthomonas suwonensis 11-1]
 gi|317466940|gb|ADV28672.1| exodeoxyribonuclease III [Pseudoxanthomonas suwonensis 11-1]
          Length = 256

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 86/304 (28%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N+L+                     L Q+ +    DIV LQE          
Sbjct: 1   MKVASWNVNSLN----------------VRMPHLEQWLRAFAPDIVGLQET--------- 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     ST   + +    S    +  +A+  +                      +R
Sbjct: 36  -KLEDHKFPDSTLAALGYRSVFSGQKTYNGVAILSREAPRDVLV------GVPGFEHEHR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           RA+   +      + V+++++ +   + + +     +          ++ W+ Q+     
Sbjct: 89  RAISATI----GDLRVVNLYVVNGQDVGTDKYELKLA------WLAAVRTWLEQEAREHP 138

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+ GDFN   +    +D                   + +        +    D     
Sbjct: 139 RLVVLGDFNIAPDERDVHDPAVWNETHILTSAAERAALRDLLALGLHDGYRLLHDEG-GV 197

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 ++          ID  ++ +     ++           D      +R SDH P 
Sbjct: 198 FSWWDYRMAAFRRNLGLRIDLTLVSEALRGQVVAAGI-------DREPRTWERPSDHAPA 250

Query: 299 SIDY 302
            I+ 
Sbjct: 251 WIEL 254


>gi|169633174|ref|YP_001706910.1| putative extracellular nuclease [Acinetobacter baumannii SDF]
 gi|169151966|emb|CAP00827.1| putative extracellular nuclease [Acinetobacter baumannii]
          Length = 812

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 97/325 (29%), Gaps = 50/325 (15%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K++DAD+  L E+ + 
Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEIANN 520

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +         + +      R   + I  AI    K V+ L ++  L   + 
Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGTDVIAVAIIYNSKRVKPLNKAVVLDLGE- 579

Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS--------CSLLS 185
                 NR  +    +     K   V+  HLKS        N+                 
Sbjct: 580 -----KNRTTLAQTFQAIRGNKTFTVIPNHLKSKGCSGVDANSSDADQNDGQGCWNPTRV 634

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  W+ +          ++ GD N            ++  +    L      + +
Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDTKVGQGA 692

Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
           +  +                 +D+ + D + Y  +++     I  +E  +          
Sbjct: 693 QAYSYVFGVASDANGNGGAGNLDHAIADADLYPKVVRTFAWHINADEPTVLDYNEEYKTD 752

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +D D
Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777


>gi|312602724|ref|YP_004022569.1| endonuclease/Exonuclease/phosphatase family protein [Burkholderia
           rhizoxinica HKI 454]
 gi|312170038|emb|CBW77050.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 273

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 83/280 (29%), Gaps = 55/280 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+ ++NI+    +                   +      LDADI+ LQE+    A   
Sbjct: 8   ELRIATYNIHGAGGR-----------WRQRSTQRIAGVVAELDADIIALQEVPLNGASN- 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P     + ++T                   AV  +      ++  L     SF+R   
Sbjct: 56  -APGVLDDLQHATGMEAVAGPTLQTERGDYGNAVLSRLPIRAARTLDL-----SFTRREP 109

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A++  +E     + V+  HL               S    S Q + L   +     S 
Sbjct: 110 RGALDADIEYADGVLRVVATHLGL-------------SAIERSAQVRTL---LAAFDSSA 153

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GD N         + F         +  F +    R    +       +D   +
Sbjct: 154 LPVILLGDIN---------EWFVHGRALRALVGHFRRAPAPRTFPARWPILS--LDRIWV 202

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ++LI               +  +  SDH P+    
Sbjct: 203 HPG--EWLIDVQVH--------RSALARVASDHLPLIARI 232


>gi|134098128|ref|YP_001103789.1| hypothetical protein SACE_1542 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133910751|emb|CAM00864.1| hypothetical protein SACE_1542 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 305

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 76/292 (26%), Gaps = 34/292 (11%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +  +++ ++S+NI              S    ++   +L +        ++ +QE    
Sbjct: 40  PAQGERLHVMSFNIRY-----DSKAVPPSPDAWSTRRPILAELLNAESPTLLGVQEALYR 94

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                         +    R         +    T                P +    S+
Sbjct: 95  QVKQVHADIPAHYDWIGLGREGGGRGEFMSIYYDTRRVEPLDYDHFWLSDTPNVIGSASW 154

Query: 138 SRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                R    +       G++   ++ H                S +   + A  ++D I
Sbjct: 155 GNTVVRMVTWVRFRDLRTGREFTHVNTHFDH------------QSENSRQRSAALVRDRI 202

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
               ++ +P ++ GDFN +     +          +       +   +            
Sbjct: 203 AGF-DAGLPVLLTGDFNTRAGDSESYRILTSGGLADGWETAAERLTPAWGTFGGYEEPVE 261

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDY 302
               ID+ + +              +    +  +  G   SDH P+   ++ 
Sbjct: 262 GGDRIDWLLANDR---------VRVLKAAINPFRKDGWFPSDHLPVHALVEL 304


>gi|66047531|ref|YP_237372.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae B728a]
 gi|63258238|gb|AAY39334.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 380

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 93/342 (27%), Gaps = 75/342 (21%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C  +V        Q +++++WNI  L+                  + + +    D
Sbjct: 52  LLTASCNPAVEAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYD 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   VA ++P +T   ++  E + 
Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFVP 171

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157
           N     S          R       +   P+  A     +   + A+ +      +G K+
Sbjct: 172 NPHIWGSVGRKLVT-LSRFHIDSAERLQLPVPDANIISRQFQPKDALLVSYLPLRDGGKL 230

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V++  L           T   +     +Q    +  + + +    P++I GDFN     
Sbjct: 231 AVINTSLT----------TARHAGDTAQKQVAATETQLDKLESGGTPWLIGGDFNLLPLG 280

Query: 218 LGNNDDFWKTIDPNDSLIR-------------FPKEKDSRCNANKNLRNKIPI------- 257
                   + +                            R     +  N   I       
Sbjct: 281 QYQRLPEQQRLGYAADSELHQLWDKYPMIPNNAESSGIDRSKWLTHFPNDSRINGPDRTV 340

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           DY     +  +     S           +     +SDH P+ 
Sbjct: 341 DYLFYSPSLKR----VSARV-------RRDDTLLISDHLPVI 371


>gi|330953940|gb|EGH54200.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7]
          Length = 261

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 86/295 (29%), Gaps = 51/295 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               S +  + +++ N++                        LR+  + + ADIVFLQE+
Sbjct: 11  ATPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEV 60

Query: 75  --GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                +   +V    T   +     S      + +     D     A+  K   +  ++ 
Sbjct: 61  HGEHQSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHENL 120

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            +     S      R  +  ++E+      V  + +                 S   QQ 
Sbjct: 121 DI-----SIHGTEQRGLLHCILEVPHAG-RVHAVCVHLGLR-----------ESHRRQQL 163

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + L + + +      P ++AGDFN              ++  +     F +   +   + 
Sbjct: 164 KLLNELMAR-IPEGEPVIVAGDFNDWRQRAD------ASLQGSGLHEVFVERFGAPAKSF 216

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 + +D   +           S                 LSDH P++++  
Sbjct: 217 PARWPLLRLDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 260


>gi|296103284|ref|YP_003613430.1| endonuclease/exonuclease/phosphatase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057743|gb|ADF62481.1| endonuclease/exonuclease/phosphatase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 253

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 74/286 (25%), Gaps = 49/286 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SLKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P      F +     +++        + H   AV  +                S
Sbjct: 59  MHFENWPDTPHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              +  R  +   +        V    +                 +    Q Q L +W  
Sbjct: 114 VGESEKRGLLYCRIAPPDLDFPVHVGCVHLGLR-----------EAHRQAQLQMLAEWTN 162

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P VIAGDFN       +       ++       F +               + 
Sbjct: 163 A-LPEGEPVVIAGDFNDWRQRANHPLKVEAGLEE-----IFTRAHGRPARTFPVRFPLLR 216

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +                           + LSDH P+S + 
Sbjct: 217 LDRIYVKNAHASS-----------PTALALLNWRHLSDHAPLSAEI 251


>gi|198282497|ref|YP_002218818.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667378|ref|YP_002424687.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198247018|gb|ACH82611.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519591|gb|ACK80177.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 257

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 81/303 (26%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                      + ++  +   D++ LQE    +A    
Sbjct: 1   MKIATWNVNSL----------------KVRLPQVLEWLGSEQPDVLCLQETKLADA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +         +  +A+  +      +        D  +R    
Sbjct: 41  ------RFPVAELADAGYRALYHGQPTYNGVAILSRTSPSDVR-CDWPDGGDGQARLCA- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                    +   + V+++++ +   LDS +  Y        Q  + L+  I  + +   
Sbjct: 93  --------ASFGDLRVVNVYVPNGQALDSDKYPYK------LQWLERLRGLIAGELQGWP 138

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GDFN   +     D                         L    ++      A  
Sbjct: 139 QLLLVGDFNIAPDTRDVYDAAEWGEGILCSAPERAALGALLELGLHDSYRKMHPDARAWS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID  +          +          D      +R SDH P+ I
Sbjct: 199 WWDYRAAAFRRNQGLRIDLILASSPVLSRTREVVI-------DRAARAAERPSDHAPVCI 251

Query: 301 DYD 303
             +
Sbjct: 252 TLE 254


>gi|220909952|ref|YP_002485263.1| exodeoxyribonuclease III Xth [Cyanothece sp. PCC 7425]
 gi|219866563|gb|ACL46902.1| exodeoxyribonuclease III Xth [Cyanothece sp. PCC 7425]
          Length = 268

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 94/309 (30%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    + ++ +    D++ LQE    ++    
Sbjct: 1   MKIATWNVN----------------SIRTRLVQVVEWLQANPIDVLCLQETKVIDS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S    + +         +  +A+  ++     +S       DS       
Sbjct: 41  ------DFPRSPFLDLGYQVHCYGQKSYNGVAILSRSEPDQVRSGFATVLADS---PQVE 91

Query: 144 RAVEL-----LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ- 197
            A+E      ++      + V+++++ +   + S +  Y  +          L+D++   
Sbjct: 92  AALEFDQQKRVISAVWGNLRVVNLYVPNGSAIGSEKYVYKLA------WLDLLRDYLKTL 145

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKD 242
           + ++    VI GDFN  +     +D                  + I        F K   
Sbjct: 146 QAQAPQDMVICGDFNIALEDRDIHDPQGRETQVMATDTERQALQAILDLGFADGFRKFTA 205

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           ID+  ++Q+ Y   +  +        D       + S
Sbjct: 206 EGGH-FSWWDYRAGSFRRDRGWRIDHLYLNQSLYAKAVACTI-------DKTPRHNPQPS 257

Query: 294 DHCPISIDY 302
           DH P+ ++ 
Sbjct: 258 DHTPVILEL 266


>gi|168704312|ref|ZP_02736589.1| endonuclease/exonuclease/phosphatase family protein [Gemmata
           obscuriglobus UQM 2246]
          Length = 295

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 90/292 (30%), Gaps = 44/292 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V  + S A +   VS+NI       G  L   S +   +    + +  +    D VFL E
Sbjct: 42  VAASRSPAGEATFVSYNIAKGFAHRGG-LKFESREFVLAKLRRMAEVIRAEQPDAVFLSE 100

Query: 74  MGSYNA---VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
             +  A   V +V      C         N++       +    A+  +       +  L
Sbjct: 101 ALTELAPCNVDQVEYLARECGLPHVAAGENYNVGLPFARVAGGNAILSRTPLTPVANIDL 160

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G K  +    NRRA+ +  E  G+ + +  +H  SF                   QAQ 
Sbjct: 161 AGRKPFWVTGNNRRALFVSAEFGGRPVLMAALHNDSF------------DMRNNLTQAQQ 208

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L D++        P ++AGDFN +           K I              +     + 
Sbjct: 209 LLDFV-----GDRPAILAGDFNNRPENASI-----KLIRDTGKFCGAFDGPPTFFEGTR- 257

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +DY       ++ L     ++               SDH P+   +
Sbjct: 258 ---AERLDYIFA-PAGWELLESRVVADDT-------------SDHRPLVCRF 292


>gi|145324102|ref|NP_001077640.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|215275244|sp|A8MS41|CCR4D_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 4;
           Short=CCR4 homolog 4
 gi|332193244|gb|AEE31365.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana]
          Length = 417

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 87/324 (26%), Gaps = 46/324 (14%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            RLVS+NI      +   +     +  +  +    +    KNL AD   LQE+  Y++  
Sbjct: 92  FRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYDSFY 151

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    +        +R     +         + A      R+           DS S + 
Sbjct: 152 RNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCSE 211

Query: 142 NRR----------------------------AVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            +                              +     IN     ++ +      +   L
Sbjct: 212 QKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLYWDPEL 271

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------LGNNDD 223
            +        L  +    K  I+ + E     ++AGDFN                   + 
Sbjct: 272 ADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYLVSGNAKPTET 331

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--- 280
             +   P      +   +      N        +DY  +  +   F+   S  ++     
Sbjct: 332 IEEEEAPVPLSSVYEVTRGEPKFTNCTPGFTNTLDYIFISPS--DFIKPVSILQLPEPDS 389

Query: 281 -NEDDIKSRGKRLSDHCPISIDYD 303
            +           SDH PI  +++
Sbjct: 390 PDVVGFLPNHHHPSDHLPIGAEFE 413


>gi|29346594|ref|NP_810097.1| hypothetical protein BT_1184 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253568042|ref|ZP_04845453.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29338490|gb|AAO76291.1| putative transmembrane endonuclease/exonuclease [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251842115|gb|EES70195.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 370

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 90/304 (29%), Gaps = 68/304 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    + + ++N+N+ + +                   +  Y K L  DI   QE     
Sbjct: 109 ATESALTIATYNVNSFNHEHTGFSC-----------KEIAAYMKELGVDIFCFQEF---- 153

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +   F  ++     S      +       +    +AV  +     +Q      + +   
Sbjct: 154 GINHEFGTDSLRTVLSEWPYY-YVPSSPAGESLLQLAVFSRYPIKEKQLVTYPNSNNCS- 211

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSF-------------CFLDSLENTY-------- 177
                  +   ++ING+ I + + HL++                 D+             
Sbjct: 212 -------LWCDIDINGQTIRLFNNHLQTTEVSRNKRKLEKELRADDTDRAERAALTLADG 264

Query: 178 -SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
              +    + QA+ +   I+   +S  P ++ GDFN   +        ++T+        
Sbjct: 265 LHENFKKRAAQAEHINQLIS---DSPYPTLVCGDFNSLPSSY-----VYQTVKGEKMNDG 316

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           F           +  ++ + IDY +                  +   D  S     SDH 
Sbjct: 317 FQTCGHGYMYTFRYFKHLLRIDYILHSSE--------------FQGVDYFSPDLEYSDHN 362

Query: 297 PISI 300
           P+ +
Sbjct: 363 PVVM 366


>gi|221198087|ref|ZP_03571133.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
 gi|221204354|ref|ZP_03577371.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221175211|gb|EEE07641.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221182019|gb|EEE14420.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
          Length = 285

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 84/307 (27%), Gaps = 52/307 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +R++ WNI    + +GV            D       A+ L D D++ +QE+        
Sbjct: 1   MRVIDWNIQWGRDADGV-----------VDLRRTIAVARQLADFDVLCVQEITRGFDALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                   A++                    +          A+  +          L  
Sbjct: 50  GRPGVGQFAELAALLPGYTVVEAIGADLPPAQPGTPRRQFGNAIATRLPVGRVLRQLLPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D+ + +  R A+++ +      + V+  HL+ +   +        +     ++A    
Sbjct: 110 PADADAPSMPRVALDVELLTASGPLRVVTTHLEFYS--ERQRLAQVDAIRARHREACAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           D     +    PF         ++ GDFN   +                 +  +  +   
Sbjct: 168 DRPAPAENDTGPFAATAQSRDAILCGDFNSAFDSTAYRRMLEPIDGAPAFVDAWIAQHPG 227

Query: 244 RC--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           R         +  +     +  D+  +       L +                  R SDH
Sbjct: 228 RTPPPTAGVYDTAQWSDGPLACDFAFVTDTLLPRLARCEI-----------DGAVRASDH 276

Query: 296 CPISIDY 302
            PI ++ 
Sbjct: 277 QPIVLEL 283


>gi|149199822|ref|ZP_01876852.1| hypothetical protein LNTAR_23729 [Lentisphaera araneosa HTCC2155]
 gi|149137110|gb|EDM25533.1| hypothetical protein LNTAR_23729 [Lentisphaera araneosa HTCC2155]
          Length = 271

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 89/281 (31%), Gaps = 40/281 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL ++N+     +           +  ++     Q  +    D++ LQE  +     K 
Sbjct: 30  LRLSTFNLAHGRGRSLSHFTLGRK-KIEANLIATAQQIQASPVDLLALQEAEAEMTWHKN 88

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++ +    +    +   +           AV  K   V  +S+    +K +F +    
Sbjct: 89  LHQSQFLAEQAGFSQVAQGEHVRGKRYSYGTAVLSKLKIVHSESHVFPRSKLTFPKGF-- 146

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    K   V+ +HL                     +Q Q L ++I  +    +
Sbjct: 147 -VSAEVISHCQKHFRVISLHLDFLH------------EKTRQRQIQMLCNYIQNQAP--L 191

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P +I GDFN +    G  +   + ++         +  + +       +  + +D+ ++ 
Sbjct: 192 PLIIMGDFNCQYRKNGVLERLAQELNL--------QVWNPQEKIVSFPKLGLRLDWILIS 243

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Q                  +  +      SDH  +  + +F
Sbjct: 244 QEMR--------------FNSYELWDDLASDHLAVRAELEF 270


>gi|332978781|gb|EGK15471.1| exodeoxyribonuclease III [Psychrobacter sp. 1501(2011)]
          Length = 271

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 81/314 (25%), Gaps = 77/314 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VS+NIN +  +                   +R      D D++ +QE   ++     
Sbjct: 2   IRFVSFNINGIRAR-------------QHQLEAVRDII---DPDVMGIQETKVHDE---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKDSFSRAGN 142
                          + +         H  +A+  K     +Q+ +P    +        
Sbjct: 42  ------QFPLQDVESLGYHVEYFGQKAHYGVALVSKVKPIFVQKGFPGESEEAQKRFIHA 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R         +GK+I VL+       F       +     +  +    L +++ Q K+  
Sbjct: 96  RYIF------DGKEIDVLN-----GYFPQGESRDHETKFPMKREYYASLNEYVDQLKDEG 144

Query: 203 VPFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEK 241
              +I GD N                               +++  +   D    +    
Sbjct: 145 RTLIIMGDMNIAPEDNDIGIGEKNAQRWLKNGKTSFLPEEREWYSALMSRDLFDTYRIHN 204

Query: 242 DSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                       +             ID+ +   +     I                  +
Sbjct: 205 PDCNEKFSWFDYRSRGFNDDPKRGLRIDHILCTDDIKDQCIDAGI-------SYELRAME 257

Query: 291 RLSDHCPISIDYDF 304
           + SDH PI   + F
Sbjct: 258 KPSDHAPIWASFKF 271


>gi|323967391|gb|EGB62812.1| endonuclease/Exonuclease/phosphatase [Escherichia coli M863]
 gi|327253576|gb|EGE65205.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli STEC_7v]
          Length = 253

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 83/295 (28%), Gaps = 53/295 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +     ++++ NI+                        LR   + + ADIV LQE+ 
Sbjct: 2   PVQTQQFSFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVM 51

Query: 76  SYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             + V  +    +P  +   F +     +  + +     + H   AV  +          
Sbjct: 52  GAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----H 106

Query: 130 LLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 S   A  R  +   +     GK I V+ +HL                 +    Q
Sbjct: 107 YENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQ 153

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L +W+ +      P ++AGDFN       +       +D       F +        
Sbjct: 154 LAMLAEWVNE-LPDGEPVLVAGDFNDWRQKANHPLKMQAGLDE-----IFTRAHGRPART 207

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  + +D   +   +                       + LSDH P+S + 
Sbjct: 208 FPVQFPLLRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|156365697|ref|XP_001626780.1| predicted protein [Nematostella vectensis]
 gi|156213669|gb|EDO34680.1| predicted protein [Nematostella vectensis]
          Length = 327

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 82/296 (27%), Gaps = 23/296 (7%)

Query: 21  AQKVRLVSWNINTLSEQEGVSL-----WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
               R++ WN+                  +     ++    L Q     + DI+ L+E+ 
Sbjct: 41  GSPFRVMQWNVLADGLSGSSPTSNFIKCPSEALSWSTRKQRLIQGILTYEPDIICLEEVD 100

Query: 76  S-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             Y+       +  +   +  +   +   +   N      A+     R   +       K
Sbjct: 101 HFYDFFKPSLDEVGYTGIFVPKE-DSPCLKFPGNSGPDGTAIFFDKQRFKLRKQQSKQLK 159

Query: 135 DSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +S     N+ A+ + +   +N K ++    HLK+      L +    S          L 
Sbjct: 160 NSDGTLTNQTALFVHLFDNLNKKSLYCCGTHLKAKPAFQDLRSAQGKSV---------LA 210

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGN---NDDFWKTIDPNDSLIRFPKEKDSRCN-AN 248
                 +      ++ GDFN +          D        +        E D       
Sbjct: 211 FLKDFMENEQAEVLVCGDFNAEPTEPVYQVMEDGVHGVPLRSAYKTISRSEPDYTTWKIR 270

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            N   K  IDY    +                N D +       SDH  +  D+ F
Sbjct: 271 PNGEVKHTIDYVWHSEGLKVDGYLHVADTASMNVDRLPCMAY-PSDHISLVFDFSF 325


>gi|46581661|ref|YP_012469.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46451084|gb|AAS97729.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235301|gb|ADP88155.1| exodeoxyribonuclease III [Desulfovibrio vulgaris RCH1]
          Length = 257

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 77/303 (25%), Gaps = 74/303 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           RLVSWN+N          W                +     AD+V LQE        K  
Sbjct: 4   RLVSWNVNGFRAVSSKPEW---------------NWFSTTTADVVALQE-------TKAD 41

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P        S +         +    ++ +AV  ++  +           D   R   R 
Sbjct: 42  PAQVGEEHRSPDGWHAWWLPATVKKGYSGVAVFSRHTPLDVA----YDLPDERFRGEGR- 96

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            + L       +    +I+  +    +              + A+ L+           P
Sbjct: 97  CLHLTFP----EFHFFNIYFPNGGMGEERLRYKMGYYEAFLEHAETLRR--------DRP 144

Query: 205 FVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            V+ GDFN                   +L     +         +  F   +    +   
Sbjct: 145 IVVCGDFNTAHRPIDLARPKENETVSGFLPEERAWMDRFVAAGYVDTFRHVRGDEADRYS 204

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               K           IDYF + +     +                      SDHCP+ +
Sbjct: 205 WWSYKTRARARNVGWRIDYFFVSEELRGAVRDAWIE-----------MDVMGSDHCPVGL 253

Query: 301 DYD 303
           + +
Sbjct: 254 ELE 256


>gi|192288715|ref|YP_001989320.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
 gi|192282464|gb|ACE98844.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
          Length = 270

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 78/306 (25%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L +WNIN                       L+ ++ K    DI+ LQE          
Sbjct: 3   LTLTTWNIN----------------SVRLRIDLVAKFLKAQRPDILCLQETKCP---DDA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +       RL       +    +  +AV  K   V           DS   +   
Sbjct: 44  FPLKRFK------RLGYEHVALNGQKGYHGVAVISKLPFVTTDIRTFCDIIDSRHIS--- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V +  + N   + + + ++ +    D  +   +P           +K           
Sbjct: 95  --VSVKTDENAPPLVLHNFYVPAG--GDIPDPAVNPKFKHKLSFLDEMKACEPLHPSGDQ 150

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N   +                           +   + +    +        
Sbjct: 151 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPVECEKLLAVLRAGNWVDVARERIPLDQKV 210

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  + +     ++        +         +R SDH P
Sbjct: 211 YTWWSYRAADWTVGDRGRRLDHIWVSEALKDRVVD-------FKVLRDARSWERPSDHVP 263

Query: 298 ISIDYD 303
           +++  +
Sbjct: 264 VTMTME 269


>gi|119497479|ref|XP_001265498.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya
           fischeri NRRL 181]
 gi|119413660|gb|EAW23601.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya
           fischeri NRRL 181]
          Length = 439

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 102/313 (32%), Gaps = 34/313 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R + L L+   +P  A+ A +  ++S+N+  L      +         +     + +  
Sbjct: 1   MRPFHL-LLAAGIPALAATAGEFNILSFNVAGLPAILNGNEVPGDKTDNSR---QIGKKF 56

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                D++ +QE  +Y+A         +       R          + ++T      +  
Sbjct: 57  AEYGYDVIHVQEDFNYHA-------YIYETDNHPYRTPTSGGAAIGSGLNT--LSNFQFT 107

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++  +      +       +    + V ++ G  +   ++H  +    D         
Sbjct: 108 NFVRTKWGTCSNAEGADCLTPKGFTSMRVRVDEGVYVDFYNLHADAGSKDDD-------- 159

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFP 238
               S   Q L D+I          ++ GD N +    G+N   ++T +   N  +    
Sbjct: 160 VKARSANLQQLADYIK-VNSVGNAVLVFGDTNARYTRSGDNIRVFQTQNGMVNPWVELIL 218

Query: 239 KEKDSRCNAN-------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           K  +    +N           +   +D      +    L    ++    +   +  +G  
Sbjct: 219 KGAEPAEGSNALICQNPSTTNDCETVDKIFYRGSRAADLKAVFWN--YESNKFLSDKGTI 276

Query: 292 LSDHCPISIDYDF 304
           LSDH PI+ ++ +
Sbjct: 277 LSDHNPITTNFTW 289


>gi|228940815|ref|ZP_04103375.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228973735|ref|ZP_04134313.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228980291|ref|ZP_04140602.1| Exodeoxyribonuclease [Bacillus thuringiensis Bt407]
 gi|228779396|gb|EEM27652.1| Exodeoxyribonuclease [Bacillus thuringiensis Bt407]
 gi|228785981|gb|EEM33982.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228818829|gb|EEM64894.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326941450|gb|AEA17346.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 252

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +   ADI  LQE+        +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  +++ ++  +        +             + L        +   
Sbjct: 93  ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +     ++  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFVDTYRYLYPNQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|307565860|ref|ZP_07628321.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           amnii CRIS 21A-A]
 gi|307345484|gb|EFN90860.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           amnii CRIS 21A-A]
          Length = 315

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/328 (12%), Positives = 90/328 (27%), Gaps = 50/328 (15%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYA 61
            +P +     K+ +V  N   + +    SL  ++             +       + +  
Sbjct: 2   FLPFSLFAQTKIVVVELNAENMFDVRHDSLKNDTEFLPNGMRHWTKAKYWEKINKIGKEI 61

Query: 62  KNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            +           DIV L E+ +   +  +  ++          + N     S ++    
Sbjct: 62  LSCGKDSVGWSVPDIVGLCEVENDTVLFDLTKRSLLRKARYEYIMTN-----SPDERGID 116

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDS 172
           +A+              +  K        R  + +  EI +G  + V  +H  S    + 
Sbjct: 117 VALLYSPFSFKVLKADTIKVKPLKGMKPTRDILHVEGEIVSGDTLHVFLLHAPSKSGGE- 175

Query: 173 LENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                  S       A  L   I   +K  +    +I GDFN   +           I  
Sbjct: 176 -----LQSRPFRLHVADVLCHSIDSIRKINNNSKILIMGDFNDYASSPALRRICKHNIID 230

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY---------- 280
              +    +         +       +D+F++  N    +   S ++  +          
Sbjct: 231 ---ISEKAQGTHGAMGTYRFQGEWGSLDHFLISLNLLSNIKSCSINDAPFLLEEDMKYGG 287

Query: 281 ----NEDDIKSRGKRLSDHCPISIDYDF 304
                  +        SDH P+ +   F
Sbjct: 288 VKPRRNYNGLRYNSGFSDHLPLVLRLTF 315


>gi|187729939|ref|YP_001853833.1| endonuclease/exonuclease/phosphatase [Vibrio tapetis]
 gi|182894498|gb|ACB99663.1| putative exported nuclease [Vibrio tapetis]
          Length = 287

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 96/320 (30%), Gaps = 58/320 (18%)

Query: 1   MIRKYVLALVFFLVPCTASVA-----------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           M    + A++ F+V  ++++A             +R+ S+NI               +  
Sbjct: 1   MKLTSIAAVIGFIVLSSSTLAFDRLMDGPADTNSIRVGSYNI---------------MAS 45

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGS------YNAVAKVFPKNTWCIFYSTERLINHSK 103
                  + +  + ++ DI+ LQE+ +       N   +     +   + + +  +N+  
Sbjct: 46  RMGSTDAIVEAIRKMNVDIIGLQEVDNMTGRSGKNFSKEGSNPVSQAEYIANKLGMNYYF 105

Query: 104 R--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
                ++      AV  K    L +   L   K     A  R A  + V++      V+ 
Sbjct: 106 CKAIDHDGGEYGTAVLSKYDLKLNKRMELPNIKG----AEQRAACAVEVDVPNYPAPVML 161

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           +                    L ++Q + L+   +  +      +I GD N         
Sbjct: 162 VTTHLDFTTQ----------PLRAEQVRTLQTKFSSWQFKNALPIIVGDLNLPPQSTEYL 211

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
           D      D +  L               +      IDY +        + +    +    
Sbjct: 212 DLTAWFNDTDKELK----------YTAPSWNPDRKIDYILTSNAQKWDIKEVYIPKPSDR 261

Query: 282 EDDIKSRGKRLSDHCPISID 301
                     +SDH P+ ++
Sbjct: 262 ATPESKPYASVSDHLPLLVE 281


>gi|171060686|ref|YP_001793035.1| endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6]
 gi|170778131|gb|ACB36270.1| Endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6]
          Length = 276

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 87/303 (28%), Gaps = 58/303 (19%)

Query: 15  PCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
               + A K    +R+ ++NI+           +    +   +   L    + LDAD+V 
Sbjct: 16  APPPARADKDGSRLRVATYNIH--------KGVRGMGPQKRLEIHNLGMGVQALDADLVC 67

Query: 71  LQEM--GSYNAVAKV------FPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNV 121
           LQE+    +    +       +PK     F + E     +             A+  +  
Sbjct: 68  LQEVRLFHHGDANRFDHTHFGWPKQGQAEFLAPEGYESAYRTNAVTRGGEHGNALLSRWP 127

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                 + +     S  R   R  +  +V+ +G  +  +  H                  
Sbjct: 128 LGDVGHHDV-----SDHRFEQRGLLHTMVQWHGVTVHTIVAHFGLIH------------- 169

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           +   +QA+ L D+I  K       V+AGDFN     L         I         P + 
Sbjct: 170 ASRVRQAERLGDYIDAKIPRGALVVVAGDFNDWGERLDP------IIGAAGLQRAAPPDA 223

Query: 242 DSRCNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                   +      +D             +                   R+SDH P+ +
Sbjct: 224 RRGPLTFPSRMPLFALDRVYTRGLRCADTFVPRGA------------AWARMSDHLPLVV 271

Query: 301 DYD 303
           + +
Sbjct: 272 ELE 274


>gi|329890230|ref|ZP_08268573.1| exodeoxyribonuclease III [Brevundimonas diminuta ATCC 11568]
 gi|328845531|gb|EGF95095.1| exodeoxyribonuclease III [Brevundimonas diminuta ATCC 11568]
          Length = 261

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 84/304 (27%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    + ++ +  + D+   QE+   +     
Sbjct: 1   MRIATWNVN----------------SVNARLPTVLEWIQAANPDVACFQEIKCVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++        +  +A+  K      +        D  +R    
Sbjct: 41  ------KFPREAFEDLGYNVETHGQKSYNGVALLSKYPLSDVRRGLPGDDGDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E L+E   + I V  I+L +   L + +  Y  +        Q L++   +      
Sbjct: 92  --LEALIEAP-RPIRVASIYLPNGNPLGTEKFAYKLA------WFQRLQNHARELLALEE 142

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P  + GD+N                       + + ++ +          +         
Sbjct: 143 PLALCGDYNVIPEAEDAKNPAAWAEDALFQPESREAFRALKWLGLAD-SHELGREPAGTF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ ++  +A                       ++ SDH P+ 
Sbjct: 202 TFWDYQAGAWQRNHGIRIDFALLSPHAADRFRA-------IETHREARDMEKPSDHVPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|163853428|ref|YP_001641471.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1]
 gi|254563357|ref|YP_003070452.1| exodeoxyribonuclease III [Methylobacterium extorquens DM4]
 gi|163665033|gb|ABY32400.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1]
 gi|254270635|emb|CAX26639.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens DM4]
          Length = 269

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/306 (9%), Positives = 73/306 (23%), Gaps = 66/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                        + ++ +    D++ LQE         +
Sbjct: 3   LTVTTWNIN----------------SVRLRIESVLRFLREAQPDVLCLQETKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +            +   +    +  +A+  +   + +         D+      R
Sbjct: 44  FPLKAFKG------SGYENIVFAGQKGYNGVAIISRFPLLTRDVMSFCERPDA------R 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +L    G    ++          D      +P  +        L+ W  ++     
Sbjct: 92  HISAVLGPEAGPAAGIVLHDFYVPAGGDMPHRDLNPKFAHKLDFLSELRVWGGRRVSG-- 149

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                   +     +           +             
Sbjct: 150 PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVETEALETLRGEAGWIDAARLLTPEPEKI 209

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  +          +             +R SDH P
Sbjct: 210 YTWWSYRSPNWELANKGRRLDHTWVSPDLAG-------TVRRVAVFREARGWERPSDHVP 262

Query: 298 ISIDYD 303
           +++  +
Sbjct: 263 VTLTLE 268


>gi|260912305|ref|ZP_05918856.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 472 str. F0295]
 gi|260633606|gb|EEX51745.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 472 str. F0295]
          Length = 321

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 81/315 (25%), Gaps = 50/315 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD------- 65
             LV  N   L +    SL  +           +  R       + Q             
Sbjct: 12  FTLVQLNCENLFDCRHDSLKDDHEFLPEAYRHWTPSRYWKKLNRIGQEIVACGGEGKQWR 71

Query: 66  -ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
             D+V L E+ + + +  +  ++          + N     S +     +A+        
Sbjct: 72  LPDLVALCEVENDSVLRDLTRRSLLRTARYEYVMTN-----SPDVRGIDVALLYSPFTFA 126

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                 L           R  +    V   G  + V  +H  S    ++    Y  + + 
Sbjct: 127 LVKSYALRVNPLAGMRPTRDILYANGVTAGGDTLHVFVLHAPSRAGGEANTRPYRLAVAR 186

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
               A    D I Q   +    V+ GDFN   +         + +  ND          +
Sbjct: 187 RLCAA---IDSIRQGNMAAN-IVVTGDFNDYGDTP-----ALRLLSDNDLTDVSANAIGN 237

Query: 244 RC--NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------------NEDDIKS 287
                  +       +D+  + +  ++  +     +  +                     
Sbjct: 238 NGAKGTYRYQGEWGSLDHIYVSRLLHEKGVSCRIFDAPFLLEDEEKYGGKRPWRTYQGPK 297

Query: 288 RGKRLSDHCPISIDY 302
                SDH P+ + +
Sbjct: 298 YLGGFSDHLPLVVTF 312


>gi|15893514|ref|NP_346863.1| exodeoxyribonuclease (exoA) [Clostridium acetobutylicum ATCC 824]
 gi|15023055|gb|AAK78203.1|AE007535_5 Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum ATCC 824]
 gi|325507632|gb|ADZ19268.1| Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum EA 2018]
          Length = 250

 Score = 88.8 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y K +DAD+  LQE        ++
Sbjct: 1   MKLISWNVNGLRACITKGF---------------LDYFKEVDADVFCLQETKIQEGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +             +    ++  A+  K   +        G  +       R
Sbjct: 46  ELPGYYDFW-----------NYAEKKGYSGTAIFTKKKPISYS----YGINEEKHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     +                + L        +   
Sbjct: 91  -----VITLEFEDFYMVTVYTPNSKEKLARLEYRMEWEDSFRNYLKAL--------DEKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           +  +     +  +      +    
Sbjct: 138 PVIVCGDMNVAHTEIDLKNPKTNTKNAGFSPEERSKFTELLEAGFIDTYRYFYPDKEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF   +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFCTSERLKDKLVSADIHTEV-----------MGSDHCPVE 246

Query: 300 IDY 302
           +  
Sbjct: 247 LVI 249


>gi|302522772|ref|ZP_07275114.1| exodeoxyribonuclease III [Streptomyces sp. SPB78]
 gi|318058357|ref|ZP_07977080.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actG]
 gi|302431667|gb|EFL03483.1| exodeoxyribonuclease III [Streptomyces sp. SPB78]
          Length = 262

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 72/304 (23%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE  +       
Sbjct: 4   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKTTAE---- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +    +       +AV  +       S  L            R
Sbjct: 44  ------GFPTEALREAGYESAVNATGRWNGVAVISRAGLDDVVSG-LPDQPAYDGVMEPR 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +      Y        +  + L+  +        
Sbjct: 97  A-----LGATCGPVRVWSVYVPNGREVGHPHYAYK------LEWLEALRAAVAGDAAGTR 145

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N                              +         P+         
Sbjct: 146 PFAVMGDYNVAPGDEDVYDPAVFEGLTHVTPPERAALAELRATGLGDLVPRPLKYD-RPY 204

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +                   D  + +GK  SDH P+ 
Sbjct: 205 TYWDYRQLAFPKNRGMRIDLVYANAAFRSAAKDAYV-------DREERKGKGASDHAPVV 257

Query: 300 IDYD 303
           +D D
Sbjct: 258 VDLD 261


>gi|29377212|ref|NP_816366.1| exodeoxyribonuclease [Enterococcus faecalis V583]
 gi|227554220|ref|ZP_03984267.1| exodeoxyribonuclease [Enterococcus faecalis HH22]
 gi|29344678|gb|AAO82436.1| exodeoxyribonuclease [Enterococcus faecalis V583]
 gi|227176667|gb|EEI57639.1| exodeoxyribonuclease [Enterococcus faecalis HH22]
 gi|315573773|gb|EFU85964.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309B]
 gi|315580287|gb|EFU92478.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309A]
          Length = 251

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++S      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWSYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|227823661|ref|YP_002827634.1| exodeoxyribonuclease III [Sinorhizobium fredii NGR234]
 gi|227342663|gb|ACP26881.1| exodeoxyribonuclease III [Sinorhizobium fredii NGR234]
          Length = 268

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/308 (10%), Positives = 73/308 (23%), Gaps = 71/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           + + +WNIN                       L+     N   DI+ LQE         +
Sbjct: 3   LSIATWNIN----------------SVRLRMPLVEHLLVNWQPDILCLQETKCPDDQFPS 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               K  +                     +  +A   +                      
Sbjct: 47  APLKKLGYKYI-----------EMHGQKGYHGVATISRLPLTELTDRRNYCGVGDARH-- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               + ++  I GK + + + ++ +    D  + T +P           +   +  + E+
Sbjct: 94  ----LSVVFAIGGKTVRLHNFYVPAG--GDEPDRTINPKFGHKLDFVDEM-KLLHAEAEA 146

Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            +  ++ GD N                   +     D     +     +    +      
Sbjct: 147 GISSILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLTTVMTGGAWVDLMRQHTPPPE 206

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +    L       +  +        +R SDH
Sbjct: 207 KLYTWWSYRAKDWAAVDRGRRLDHIWSSADLAAKL-------LRVDILREARGWERPSDH 259

Query: 296 CPISIDYD 303
            P+   ++
Sbjct: 260 VPVIAHFE 267


>gi|330996654|ref|ZP_08320532.1| exodeoxyribonuclease III [Paraprevotella xylaniphila YIT 11841]
 gi|329572726|gb|EGG54359.1| exodeoxyribonuclease III [Paraprevotella xylaniphila YIT 11841]
          Length = 250

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 78/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L         ++                  LDAD   LQE          
Sbjct: 1   MKFISWNVNGLRACCEKGFKES---------------FAALDADFFCLQETKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  ++  +       L   D       R
Sbjct: 45  LEFEGYRSYWNYAEKKGY----------SGTAIFSRHAPLNVTYGLGLEEHD-------R 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E+     +++ ++  +        +               L        ++  
Sbjct: 88  EGRVITLEMPD--FFLVTVYTPNSQDGLKRLDYRMQWEEAFRAYLLQL--------DTRK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + +  +  +     F      R    
Sbjct: 138 PVIVCGDLNVAHREIDLKNPKSNRKNAGFTDEEREKFGILLDSGFTDTFRFFYPDREGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ +     L   +    ++            SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFLVSKRLEAQLKSATIHTEIF-----------GSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 VDL 249


>gi|254509791|ref|ZP_05121858.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11]
 gi|221533502|gb|EEE36490.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11]
          Length = 259

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 81/303 (26%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L ++  +   D+V LQE+ S +     
Sbjct: 1   MKIATFNING----------------IKARAEALPRWLDDAQPDVVLLQEIKSIDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++           +A+  K            G          R
Sbjct: 41  ------NFPREIFEDRGYNVEAHGQKSFNGVAILSKLQLEDVTR----GLPGDDMDEQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    K + +  ++L +   +   +  Y  +        + L D       +  
Sbjct: 91  WIEATVV--GKKAVRICGLYLPNGNPVPGPKYDYKLA------WMERLYDRARALLAAEE 142

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N                   +   +   ++ I        F        + +
Sbjct: 143 PALMAGDYNIIPQAEDAKRPNAWREDALFRPESRAAYRKILNLGFTEAFRARTQGPGHYS 202

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+F++       +            D      ++ SDH P+ I
Sbjct: 203 FWDYQAGAWNKNDGIRIDHFLLTPQTADLMRDC-------RIDSEVRGHEKPSDHVPVWI 255

Query: 301 DYD 303
           D D
Sbjct: 256 DLD 258


>gi|83954036|ref|ZP_00962756.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter
           sp. NAS-14.1]
 gi|83841073|gb|EAP80243.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter
           sp. NAS-14.1]
          Length = 341

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 89/336 (26%), Gaps = 56/336 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQEMG 75
           +R+ ++N+   +               ++            L    + +DAD V + E  
Sbjct: 1   MRIATYNVEWFTGLFDDEDQLLLDDGWSARHNITRAQQAQALGTVFRAMDADAVMVIEAP 60

Query: 76  SYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126
             +     V     +   +            ++     A+      +             
Sbjct: 61  DQSRKRGTVAALERFAAHFDLRTRKAVIGFANDTQQEIALLFDPDRLSATHAPGGAVGQG 120

Query: 127 ---------SYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENT 176
                       L           ++  +EL +    G    ++  HLKS     +    
Sbjct: 121 DAPRFDGTLDIDLDIDAREDHVVFSKPPLELDIVTREGVAFHMIGAHLKSKAPHGAKTPQ 180

Query: 177 YS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK----- 226
            +      +      QA WL+  I  + +   P ++ GD N         D F +     
Sbjct: 181 DALRIGIANRRKQLAQAIWLRRRIDARLDDGTPLMVLGDLNDGPGLDSFEDLFGRSSVEI 240

Query: 227 ---------TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQ 272
                     +DP+ +     +       +           +  +DY ++         Q
Sbjct: 241 VMGHRQDRALVDPHATRALGQRIGAMPTTSRFWIAPEKRYLQALLDYIMISPALTAHRPQ 300

Query: 273 ESFSEILYNEDDIKSRGKR-----LSDHCPISIDYD 303
                 L + +       R      SDH P++ID D
Sbjct: 301 WRIWHPLDDPECWGDATLRDALITASDHFPVTIDLD 336


>gi|260466724|ref|ZP_05812910.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
 gi|259029454|gb|EEW30744.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
          Length = 287

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 87/310 (28%), Gaps = 55/310 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           ++LV++NI      +G             D   + +  +   AD++ LQE+   N     
Sbjct: 1   MKLVTYNIQYGVGLDG-----------QYDVGRIAETVR--GADVIALQEVTRNNPRNGG 47

Query: 79  ---AVAKVFPKNTWCIFYSTERLIN-----HSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                        +   Y +    N        R           V  K    L ++  L
Sbjct: 48  RDMVAEIGEALPDYFAVYGSNFEANIGSRIEDGRAITTTFQLGNMVLSKTPIHLSRNLLL 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             ++        R A+E L+E     I    IHL     ++           LL+   + 
Sbjct: 108 PRSRSFEMMNFQRGALEALIETPLGFIRFYSIHLDHRSPVERASQIQFLRQRLLNYALEG 167

Query: 191 -----LKDWITQKKESLVPFVIAGDFNRKINYLG-------NNDDFWKTIDPNDSLIRFP 238
                + +    +      FV  GDFN               + +F   +  + ++    
Sbjct: 168 GALSGVAEIGLPELPHPEAFVGMGDFNMLAGSPEYVELAGRPDHEFGMPLTADFAVDAAV 227

Query: 239 KEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +   +      + +          IDY     +  + L +               R    
Sbjct: 228 RLDVADLATWVDPKRPEDASRHKRIDYIFTSASLARSLKRLWV-----------DRQAVG 276

Query: 293 SDHCPISIDY 302
           SDH P+  + 
Sbjct: 277 SDHLPVWAEL 286


>gi|330009934|ref|ZP_08306655.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella sp.
           MS 92-3]
 gi|328534648|gb|EGF61218.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella sp.
           MS 92-3]
          Length = 253

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 80/291 (27%), Gaps = 49/291 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    + +++ N +                        LR   +++ ADIV LQE+   
Sbjct: 4   PTAGFSLNVLTINTHKGFTAFNRRF----------ILPELRDAVRSVSADIVCLQEVMGA 53

Query: 78  NAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           + V  +    +P  T   F +     +++        + H   AV  +            
Sbjct: 54  HEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----YYE 108

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               S      R  +   +      I +  I +      D               Q   L
Sbjct: 109 NRDISVGNGEKRGLLYCRIVPPRSGITIHVICVHLGLRADQ-----------RQAQLTML 157

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            +W+     +  P V+AGDFN               ++       F + +          
Sbjct: 158 AEWVN-PLPAGEPVVVAGDFNDWRQQANQPLKAQAGLEE-----IFTRARGRPARTFPVS 211

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + +D   +           +  +            + LSDH P+S++ 
Sbjct: 212 FPLLRLDRIYVKNAHASRPKALALKQ-----------WRHLSDHAPLSVEI 251


>gi|325285996|ref|YP_004261786.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
 gi|324321450|gb|ADY28915.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
          Length = 353

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 84/319 (26%), Gaps = 50/319 (15%)

Query: 25  RLVSWNINTLSEQ-------EGVSLWKNSVKRTTSD-----------YTLLRQYAKNLDA 66
            +  +N+  L +        +         K T+                +     N   
Sbjct: 34  TIAFYNLENLFDTINNPNTFDDDRTPLGKDKWTSDKYMAKLKNMSTTLAKIGSSVTNSSP 93

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQ 125
           DI+ + E+ +   +  +  +       +    + H        I  A+  +K+  +    
Sbjct: 94  DIIGVCEVENDTVLTDLIQQP---ALINKGYGVIHYNSPDERGIDVALLYKKQAFIPTSF 150

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           +S+ LL  KDS  R   R  + +   ++ ++I+ +  H  S    ++       + ++L+
Sbjct: 151 KSHRLLLFKDSNYRDYTRDQLIVGGLLDNEEIYFIVNHWPSRSGGEARSRPNRIAAAILN 210

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKE 240
           ++       +    +     +  GDFN                  K +  +       + 
Sbjct: 211 KRIIDSVKRVNINAK----IISMGDFNDDPTNKSFKKVLQTEGRLKKVSDSILFNPMDEL 266

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE-------------------SFSEILYN 281
                 +          D      N                            +      
Sbjct: 267 YRKGEGSLAYRDKWNVFDQIFFTGNLVNKQKDSYSFWKACIYNAPYLITSKGRYKGYPKR 326

Query: 282 EDDIKSRGKRLSDHCPISI 300
                S     SDH P+ I
Sbjct: 327 TYSGGSYTGGYSDHFPVYI 345


>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
           14672]
 gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
           14672]
          Length = 973

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 75/288 (26%), Gaps = 43/288 (14%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                +R+++WN            + +    T     LL    ++ DAD++ LQE+ +  
Sbjct: 143 PSTGSLRVLTWNTLW-------DRYDSDRIDTARRRPLLLAALEDADADVIALQEVEAGL 195

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +        +            +S       + +  +        + L   K    
Sbjct: 196 LALLLRAPWVRAGYTLGTDPGGKDIENS------GLLLLSRLPVREAGRHELGPHK---- 245

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                    + VE     + V   HL S    +                   L       
Sbjct: 246 -----AVTAITVETGSGPLVVATTHLSSDHSHNGPARRQ-----------AELGRLAEGL 289

Query: 199 KESLVPFVIAGDFNRKINYL----GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                  ++ GDFN   +      G  D + +   P D    F    +     +      
Sbjct: 290 GGVDGDLILVGDFNDGGDEPAAALGLRDAWTEVHGPGDRTPTFDPGVNPLAAVSSLSGRA 349

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +D   +     + +            D   + G  +SDH  ++ D 
Sbjct: 350 SRLDRIFLRAGQLRAIGA------FLRGDSPTTDGLYVSDHYGVAADL 391


>gi|218231608|ref|YP_002368543.1| exodeoxyribonuclease III [Bacillus cereus B4264]
 gi|218159565|gb|ACK59557.1| exodeoxyribonuclease III [Bacillus cereus B4264]
          Length = 252

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +   ADI  LQE+        +
Sbjct: 1   MKLISWNVNGLRAVIAKGEF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  +++ ++  +        +             + L        +   
Sbjct: 93  ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + + +I     +  +      +  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSSILEEGFIDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|39933358|ref|NP_945634.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009]
 gi|39652983|emb|CAE25725.1| possible exodeoxyribonuclease III [Rhodopseudomonas palustris
           CGA009]
          Length = 270

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 78/306 (25%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L +WNIN                       L+ ++ K    DI+ LQE          
Sbjct: 3   LTLTTWNIN----------------SVRLRIDLVAKFLKAQRPDILCLQETKCP---DDA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +       RL       +    +  +AV  K   V           DS   +   
Sbjct: 44  FPLKRFK------RLGYEHIALNGQKGYHGVAVISKLPFVTTDIRTFCDIIDSRHIS--- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V +  + N   + + + ++ +    D  +   +P           +K           
Sbjct: 95  --VSVKTDENAPPLVLHNFYVPAG--GDIPDPAVNPKFKHKLSFLDEMKACEPLHPSGDQ 150

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N   +                           +   + +    +        
Sbjct: 151 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPVECEKLLAVLRAGNWVDVARERIPLDQKV 210

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  + +     ++        +         +R SDH P
Sbjct: 211 YTWWSYRAADWTVGDRGRRLDHIWVSEALKDRVVD-------FKVLRDARSWERPSDHVP 263

Query: 298 ISIDYD 303
           +++  +
Sbjct: 264 VTMTME 269


>gi|284993327|ref|YP_003411882.1| exodeoxyribonuclease III Xth [Geodermatophilus obscurus DSM 43160]
 gi|284066573|gb|ADB77511.1| exodeoxyribonuclease III Xth [Geodermatophilus obscurus DSM 43160]
          Length = 264

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 76/302 (25%), Gaps = 63/302 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                RT +D   +  + +  D D++ LQE    +     
Sbjct: 1   MRIATWNVN--------------SIRTRAD--RVVAWLQRSDVDVLALQETKCRDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S    + +      +     +A+  +   +        G     +     
Sbjct: 41  ------QFPESCFTDLGYQVAHVGHSQWNGVALLSRVG-LEDVEVAFPGQPGFGNPEPAV 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  L     G ++W L +           E       +L +  A WL +      +   
Sbjct: 94  EARALAATCGGVRVWSLYVPNGRTLTDPHYEYKLRWLGALRTAAAGWLAE------DGGA 147

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GD+N                           ++ I                    
Sbjct: 148 QVALVGDWNIAPQDDDVWDVRVFAHSTHVSEPERAAFRAIVDAGYADVVRPHTPGPGVFT 207

Query: 249 KNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + ID+ +                     D  + +GK  SDH P+ +
Sbjct: 208 YWDYTQLRFARREGMRIDFVLGSPALA-------VRVTNALIDRQERKGKGASDHAPVVV 260

Query: 301 DY 302
           D 
Sbjct: 261 DL 262


>gi|187732981|ref|YP_001881024.1| endonuclease/exonuclease/phosphatase family protein [Shigella
           boydii CDC 3083-94]
 gi|187429973|gb|ACD09247.1| endonuclease/exonuclease/phosphatase family protein [Shigella
           boydii CDC 3083-94]
          Length = 253

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI                         LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIQKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMCRDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|332286021|ref|YP_004417932.1| hypothetical protein PT7_2768 [Pusillimonas sp. T7-7]
 gi|330429974|gb|AEC21308.1| hypothetical protein PT7_2768 [Pusillimonas sp. T7-7]
          Length = 284

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 84/318 (26%), Gaps = 77/318 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+NI+      G               + LR     L  D++FLQE+   N     
Sbjct: 4   IRVVSYNIHKGRSATGG----------RESLSDLRLGLYGLHPDLLFLQEVQGRNDQRLS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  +      +             A+  +   +  +         S  R   R
Sbjct: 54  LDTQHEFLAAALNMHAAYGCNAIRPHTDHGNALLSRYPILEHE-----NQDISDHRLEQR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  L+E+ G  +  L +HL  F                 S+Q   L + I +      
Sbjct: 109 GLLHALIEVQGVSVHCLVVHLGLFAGG-------------RSRQVAALVERIKRMVPEGE 155

Query: 204 PFVIAGDFNRKINY-----------------LGNNDD-----------FWKTIDPNDSLI 235
           P +IAGDFN   N                    ++D               T+       
Sbjct: 156 PMLIAGDFNDWSNRLAPLFVQQLGLYEVFAIAPHHDPGPRLLRHSVTRLRNTLRGVSPTP 215

Query: 236 RFPKEKD----------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 +                      + +D             Q  F+         
Sbjct: 216 LAATVHELGINGAARMTPPPRTFPAAFPWLRLDRIY----------QRGFAVRKARVLQG 265

Query: 286 KSRGKRLSDHCPISIDYD 303
               K++SDH P+  + +
Sbjct: 266 VP-WKQISDHAPLYAELE 282


>gi|315502378|ref|YP_004081265.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|315408997|gb|ADU07114.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 675

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 57/289 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             T   A  VR+ ++NI      +G             D   + +  +   AD+V L E+
Sbjct: 442 ATTTPAA--VRVAAYNIRMGFGLDG-----------RLDVDAVARELR--GADVVLLSEV 486

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                +          +     RL          D     AV  +      Q+  L    
Sbjct: 487 DRGWWL----NGGHDTLALVAGRLGMPYVFAPAADPVWGDAVLSRFPMRSGQTRRLTAHG 542

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                     A+ + +++ G+++ V+  HL+     D              +QA  +  +
Sbjct: 543 APTGAQ----ALGVTLDLGGRELAVVATHLQPPPGRDP------------VEQAGEVAAF 586

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
              +  +  P V+ GD N + +     D  +        +             +     +
Sbjct: 587 -AGRYANGRPLVLGGDLNTEPD-----DPAFAEFTRAGLVDAL--AAARPLRTSPADEPR 638

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ID+  +        ++   +E               SDH P+++   
Sbjct: 639 TQIDHVFVSPGLTAGEVRAPRTE--------------ASDHLPVTLTVT 673


>gi|30263740|ref|NP_846117.1| exodeoxyribonuclease III [Bacillus anthracis str. Ames]
 gi|47529159|ref|YP_020508.1| exodeoxyribonuclease III [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186585|ref|YP_029837.1| exodeoxyribonuclease III [Bacillus anthracis str. Sterne]
 gi|65321063|ref|ZP_00394022.1| COG0708: Exonuclease III [Bacillus anthracis str. A2012]
 gi|118478961|ref|YP_896112.1| exodeoxyribonuclease III [Bacillus thuringiensis str. Al Hakam]
 gi|165872421|ref|ZP_02217056.1| exodeoxyribonuclease III [Bacillus anthracis str. A0488]
 gi|167639873|ref|ZP_02398142.1| exodeoxyribonuclease III [Bacillus anthracis str. A0193]
 gi|170706859|ref|ZP_02897317.1| exodeoxyribonuclease III [Bacillus anthracis str. A0389]
 gi|177652038|ref|ZP_02934584.1| exodeoxyribonuclease III [Bacillus anthracis str. A0174]
 gi|190568466|ref|ZP_03021373.1| exodeoxyribonuclease III [Bacillus anthracis Tsiankovskii-I]
 gi|196034121|ref|ZP_03101531.1| exodeoxyribonuclease III [Bacillus cereus W]
 gi|196038388|ref|ZP_03105697.1| exodeoxyribonuclease III [Bacillus cereus NVH0597-99]
 gi|196044665|ref|ZP_03111900.1| exodeoxyribonuclease III [Bacillus cereus 03BB108]
 gi|218904866|ref|YP_002452700.1| exodeoxyribonuclease III [Bacillus cereus AH820]
 gi|225865717|ref|YP_002751095.1| exodeoxyribonuclease III [Bacillus cereus 03BB102]
 gi|227813360|ref|YP_002813369.1| exodeoxyribonuclease III [Bacillus anthracis str. CDC 684]
 gi|228916370|ref|ZP_04079939.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228928786|ref|ZP_04091820.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935036|ref|ZP_04097866.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228947401|ref|ZP_04109692.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|229092775|ref|ZP_04223913.1| Exodeoxyribonuclease [Bacillus cereus Rock3-42]
 gi|229123254|ref|ZP_04252458.1| Exodeoxyribonuclease [Bacillus cereus 95/8201]
 gi|229185967|ref|ZP_04313138.1| Exodeoxyribonuclease [Bacillus cereus BGSC 6E1]
 gi|229603277|ref|YP_002867975.1| exodeoxyribonuclease III [Bacillus anthracis str. A0248]
 gi|254721165|ref|ZP_05182956.1| exodeoxyribonuclease III [Bacillus anthracis str. A1055]
 gi|254735775|ref|ZP_05193481.1| exodeoxyribonuclease III [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751095|ref|ZP_05203134.1| exodeoxyribonuclease III [Bacillus anthracis str. Vollum]
 gi|254759412|ref|ZP_05211437.1| exodeoxyribonuclease III [Bacillus anthracis str. Australia 94]
 gi|30258384|gb|AAP27603.1| exodeoxyribonuclease III [Bacillus anthracis str. Ames]
 gi|47504307|gb|AAT32983.1| exodeoxyribonuclease III [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180512|gb|AAT55888.1| exodeoxyribonuclease III [Bacillus anthracis str. Sterne]
 gi|118418186|gb|ABK86605.1| exodeoxyribonuclease III [Bacillus thuringiensis str. Al Hakam]
 gi|164711859|gb|EDR17401.1| exodeoxyribonuclease III [Bacillus anthracis str. A0488]
 gi|167512274|gb|EDR87651.1| exodeoxyribonuclease III [Bacillus anthracis str. A0193]
 gi|170128277|gb|EDS97146.1| exodeoxyribonuclease III [Bacillus anthracis str. A0389]
 gi|172082407|gb|EDT67472.1| exodeoxyribonuclease III [Bacillus anthracis str. A0174]
 gi|190560470|gb|EDV14448.1| exodeoxyribonuclease III [Bacillus anthracis Tsiankovskii-I]
 gi|195993195|gb|EDX57153.1| exodeoxyribonuclease III [Bacillus cereus W]
 gi|196024700|gb|EDX63372.1| exodeoxyribonuclease III [Bacillus cereus 03BB108]
 gi|196030796|gb|EDX69394.1| exodeoxyribonuclease III [Bacillus cereus NVH0597-99]
 gi|218539943|gb|ACK92341.1| exodeoxyribonuclease III [Bacillus cereus AH820]
 gi|225789176|gb|ACO29393.1| exodeoxyribonuclease III [Bacillus cereus 03BB102]
 gi|227006454|gb|ACP16197.1| exodeoxyribonuclease III [Bacillus anthracis str. CDC 684]
 gi|228597519|gb|EEK55168.1| Exodeoxyribonuclease [Bacillus cereus BGSC 6E1]
 gi|228660030|gb|EEL15666.1| Exodeoxyribonuclease [Bacillus cereus 95/8201]
 gi|228690573|gb|EEL44354.1| Exodeoxyribonuclease [Bacillus cereus Rock3-42]
 gi|228812254|gb|EEM58584.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228824606|gb|EEM70408.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228830871|gb|EEM76474.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843280|gb|EEM88359.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229267685|gb|ACQ49322.1| exodeoxyribonuclease III [Bacillus anthracis str. A0248]
          Length = 252

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 80/305 (26%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L        +               +Y +  +ADI  LQE+        +
Sbjct: 1   MKFISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NVEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +                      + L        +   
Sbjct: 92  -----VITLEFEDFYIITLYTPNSKRGLERLEYRMKWEDDFRAYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V  GD N                   +     + +  I     +  +      +  A 
Sbjct: 139 SVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     +     +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|302792621|ref|XP_002978076.1| hypothetical protein SELMODRAFT_418021 [Selaginella moellendorffii]
 gi|300154097|gb|EFJ20733.1| hypothetical protein SELMODRAFT_418021 [Selaginella moellendorffii]
          Length = 355

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 97/339 (28%), Gaps = 63/339 (18%)

Query: 19  SVAQKVRLVSWNINT-------LSEQEGVSLW--KNSVKRTTSDYTLLRQYAKNLDADIV 69
                 R+VS+NI         L           ++  +R  +    +     +LDAD++
Sbjct: 24  PETGSFRVVSYNILAQVYVKSSLFPHSPSFFCIAEHFFRRWETRSEQVLSRLLSLDADLL 83

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+  + +  K        +  S      + +R  N      I  + +  ++L+Q + 
Sbjct: 84  CLQELDEFESFYK-------PLLESKGYSSIYIQRSGNRRDGCGIIYKPERCQLLKQQFL 136

Query: 130 LLGAKDSFSRAGNRRAVELL------------------------VEINGKKIWVLDIHLK 165
                        R +  +                            N     ++ I   
Sbjct: 137 DYNDIAPDETTAGRASESVEEENDRDVSDPRVRFRRNCVGILSAFRFNHAPSNIVVIANT 196

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
              +  +L++        L  +    +  I+Q+  S    ++AGDFN        N    
Sbjct: 197 HLYWDPALQDVKLAQAKYLLAKLSQFEKEISQEFNSNPVVLVAGDFNSTPGDRVYNYITS 256

Query: 226 KTIDPNDSL---------------------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
              +    +                       +   +      N +   K  +DY     
Sbjct: 257 GRRNSGPDVELSSFKVPDLESLKVPAIPLDSLYAAVQGEPALTNWSPNFKGTLDYIFFSP 316

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +A      ++  E+  + ++        SDH PI  D+ 
Sbjct: 317 SASMR--PKTILEVPPDVEEGLPNHFHPSDHLPIGADFS 353


>gi|289450732|ref|YP_003475042.1| exodeoxyribonuclease III [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185279|gb|ADC91704.1| exodeoxyribonuclease III [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 251

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 78/302 (25%), Gaps = 78/302 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L                        +  ++L ADI+ +QE     A     
Sbjct: 3   KLISWNVNGLRACVEKGF---------------VESMQHLSADIICIQE-SKLQAGQIDL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +C +++           +    ++  A+  K   +       +   D   R     
Sbjct: 47  DLPGYCQYWN----------YARKKGYSGTAIFSKIEPLRVTYGMNMPDHDQEGRL---- 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +       ++  ++  +                      Q L+           P
Sbjct: 93  -----ITAEFPDYYLCTVYTPNSQDGLKRLVYRQSWERDFLTYLQELRRV--------KP 139

Query: 205 FVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +I GD N                   +       ++T+     +  F      +     
Sbjct: 140 VIICGDLNVAHREIDLKNPAANRKNPGFTDEERAEFQTLLDAGFVDTFRYFYPEKPEEYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++       L   S  + ++            SDHCP+ +
Sbjct: 200 WWSYRFNARSRNAGWRIDYFLVSNELTDRLQSASIHQEIF-----------GSDHCPVEL 248

Query: 301 DY 302
             
Sbjct: 249 IL 250


>gi|226941364|ref|YP_002796438.1| XthA [Laribacter hongkongensis HLHK9]
 gi|226716291|gb|ACO75429.1| XthA [Laribacter hongkongensis HLHK9]
          Length = 255

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 78/301 (25%), Gaps = 72/301 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L +WN+N+L                      +  +  +   D++ LQE+           
Sbjct: 3   LATWNVNSL----------------KVRLPQVLDWLGSNPVDVLCLQELKLEQD------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   +      +         +  +A+  +      +    +   D          
Sbjct: 41  ----KFPLADIEAAGYRAVWLGQKTYNGVAILVRAPLAPLEPVAGMPGYDD--------P 88

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++      + V+  +  +   +DS +  Y        +    L  ++  ++E     
Sbjct: 89  QARVIAATIDDVRVVCAYCVNGEAVDSDKYRYK------LEWFARLHAYLAAERERHPKL 142

Query: 206 VIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+ GDFN   +                       +  +     +  F +  D   +    
Sbjct: 143 VLTGDFNIAPDDRDVYSPESWAGKVLCSVPERQAFGDLLGLGLVDAFRQLHDGDGH-YSW 201

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           ID+ ++       L            D +    +R SDH P+   
Sbjct: 202 WDYRQGMFRRDKGLRIDHVLLSAPLAASLEACHI-------DKVPRGWERPSDHAPVVAR 254

Query: 302 Y 302
           +
Sbjct: 255 F 255


>gi|149914968|ref|ZP_01903497.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b]
 gi|149811156|gb|EDM70993.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b]
          Length = 260

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 81/303 (26%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NIN                   +    L  +      D+V LQE+ S   V + 
Sbjct: 1   MKIASFNING----------------IKARAQALTDWLDEAQPDVVVLQEIKS---VDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +           +            +A+  +              +D  +R    
Sbjct: 42  FPCELF-------EDRGYRVETHGQKSFNGVAILSRLPLEDVTRGLPGDDEDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V  +   + V  ++L +       +  Y  +        + LK        +  
Sbjct: 92  --IEGTVIGDKAAVRVCGLYLPNGNPAPGPKYDYKLA------WMERLKARAEALLAAEE 143

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N                           ++ I        F        +  
Sbjct: 144 PALMAGDYNVIPQDEDAKRPEAWRKDALALPETRAAFRRIVNLGFTEAFRAFHKGPSHYT 203

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+F++   A   L            D      ++ SDH PI I
Sbjct: 204 FWDYQAGAWNRDDGIRIDHFLLTPQAADLLGDCQI-------DRDIRDREKPSDHVPIWI 256

Query: 301 DYD 303
             D
Sbjct: 257 TLD 259


>gi|239933421|ref|ZP_04690374.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
           14672]
          Length = 947

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 75/288 (26%), Gaps = 43/288 (14%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                +R+++WN            + +    T     LL    ++ DAD++ LQE+ +  
Sbjct: 117 PSTGSLRVLTWNTLW-------DRYDSDRIDTARRRPLLLAALEDADADVIALQEVEAGL 169

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +        +            +S       + +  +        + L   K    
Sbjct: 170 LALLLRAPWVRAGYTLGTDPGGKDIENS------GLLLLSRLPVREAGRHELGPHK---- 219

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                    + VE     + V   HL S    +                   L       
Sbjct: 220 -----AVTAITVETGSGPLVVATTHLSSDHSHNGPARRQ-----------AELGRLAEGL 263

Query: 199 KESLVPFVIAGDFNRKINYL----GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                  ++ GDFN   +      G  D + +   P D    F    +     +      
Sbjct: 264 GGVDGDLILVGDFNDGGDEPAAALGLRDAWTEVHGPGDRTPTFDPGVNPLAAVSSLSGRA 323

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +D   +     + +            D   + G  +SDH  ++ D 
Sbjct: 324 SRLDRIFLRAGQLRAIGA------FLRGDSPTTDGLYVSDHYGVAADL 365


>gi|15607568|ref|NP_214941.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis H37Rv]
 gi|15839814|ref|NP_334851.1| exodeoxyribonuclease III [Mycobacterium tuberculosis CDC1551]
 gi|31791605|ref|NP_854098.1| exodeoxyribonuclease III protein [Mycobacterium bovis AF2122/97]
 gi|121636341|ref|YP_976564.1| putative exodeoxyribonuclease III protein xthA [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148660192|ref|YP_001281715.1| exodeoxyribonuclease III [Mycobacterium tuberculosis H37Ra]
 gi|148821623|ref|YP_001286377.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis F11]
 gi|167970756|ref|ZP_02553033.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis H37Ra]
 gi|215402179|ref|ZP_03414360.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis 02_1987]
 gi|215409943|ref|ZP_03418751.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215425649|ref|ZP_03423568.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis T92]
 gi|215429249|ref|ZP_03427168.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis EAS054]
 gi|215444523|ref|ZP_03431275.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis T85]
 gi|218752060|ref|ZP_03530856.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis GM 1503]
 gi|219556248|ref|ZP_03535324.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis T17]
 gi|224988813|ref|YP_002643500.1| putative exodeoxyribonuclease III protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797351|ref|YP_003030352.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 1435]
 gi|254230777|ref|ZP_04924104.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis C]
 gi|254363391|ref|ZP_04979437.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254549374|ref|ZP_05139821.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185294|ref|ZP_05762768.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199425|ref|ZP_05766916.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           T46]
 gi|260203577|ref|ZP_05771068.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           K85]
 gi|289441807|ref|ZP_06431551.1| exodeoxyribonuclease III [Mycobacterium tuberculosis T46]
 gi|289445967|ref|ZP_06435711.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552676|ref|ZP_06441886.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 605]
 gi|289568343|ref|ZP_06448570.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           T17]
 gi|289573012|ref|ZP_06453239.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           K85]
 gi|289744123|ref|ZP_06503501.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis
           02_1987]
 gi|289748911|ref|ZP_06508289.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           T92]
 gi|289752456|ref|ZP_06511834.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis
           EAS054]
 gi|289756500|ref|ZP_06515878.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis T85]
 gi|289760543|ref|ZP_06519921.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis GM 1503]
 gi|294995932|ref|ZP_06801623.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           210]
 gi|297632911|ref|ZP_06950691.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 4207]
 gi|297729886|ref|ZP_06959004.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN R506]
 gi|298523904|ref|ZP_07011313.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774523|ref|ZP_07412860.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu001]
 gi|306779272|ref|ZP_07417609.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu002]
 gi|306783061|ref|ZP_07421383.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu003]
 gi|306787428|ref|ZP_07425750.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu004]
 gi|306791980|ref|ZP_07430282.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu005]
 gi|306796167|ref|ZP_07434469.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu006]
 gi|306966432|ref|ZP_07479093.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu009]
 gi|306970627|ref|ZP_07483288.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu010]
 gi|307078353|ref|ZP_07487523.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu011]
 gi|307082911|ref|ZP_07492024.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu012]
 gi|313657215|ref|ZP_07814095.1| exodeoxyribonuclease III [Mycobacterium tuberculosis KZN V2475]
 gi|1817693|emb|CAB06567.1| PROBABLE EXODEOXYRIBONUCLEASE III PROTEIN XTHA (EXONUCLEASE III)
           (EXO III) (AP ENDONUCLEASE VI) [Mycobacterium
           tuberculosis H37Rv]
 gi|13879945|gb|AAK44665.1| exodeoxyribonuclease III [Mycobacterium tuberculosis CDC1551]
 gi|31617191|emb|CAD93298.1| PROBABLE EXODEOXYRIBONUCLEASE III PROTEIN XTHA (EXONUCLEASE III)
           (EXO III) (AP ENDONUCLEASE VI) [Mycobacterium bovis
           AF2122/97]
 gi|121491988|emb|CAL70451.1| Probable exodeoxyribonuclease III protein xthA [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124599836|gb|EAY58846.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis C]
 gi|134148905|gb|EBA40950.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148504344|gb|ABQ72153.1| exodeoxyribonuclease III [Mycobacterium tuberculosis H37Ra]
 gi|148720150|gb|ABR04775.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis F11]
 gi|224771926|dbj|BAH24732.1| putative exodeoxyribonuclease III protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318854|gb|ACT23457.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 1435]
 gi|289414726|gb|EFD11966.1| exodeoxyribonuclease III [Mycobacterium tuberculosis T46]
 gi|289418925|gb|EFD16126.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437308|gb|EFD19801.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 605]
 gi|289537443|gb|EFD42021.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           K85]
 gi|289542096|gb|EFD45745.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           T17]
 gi|289684651|gb|EFD52139.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis
           02_1987]
 gi|289689498|gb|EFD56927.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           T92]
 gi|289693043|gb|EFD60472.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis
           EAS054]
 gi|289708049|gb|EFD72065.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis GM 1503]
 gi|289712064|gb|EFD76076.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis T85]
 gi|298493698|gb|EFI28992.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216872|gb|EFO76271.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu001]
 gi|308327716|gb|EFP16567.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu002]
 gi|308332078|gb|EFP20929.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu003]
 gi|308335893|gb|EFP24744.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu004]
 gi|308339470|gb|EFP28321.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu005]
 gi|308343335|gb|EFP32186.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu006]
 gi|308355828|gb|EFP44679.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu009]
 gi|308359748|gb|EFP48599.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu010]
 gi|308363690|gb|EFP52541.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu011]
 gi|308367342|gb|EFP56193.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu012]
 gi|323721099|gb|EGB30161.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902253|gb|EGE49186.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           W-148]
 gi|328457137|gb|AEB02560.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 4207]
          Length = 291

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 66/305 (21%), Gaps = 66/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  +    D D++ +QE    +     
Sbjct: 24  LRLATWNVN----------------SIRTRLDRVLDWLGRADVDVLAMQETKCPDG---- 63

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       D    +A+  +      +         S       
Sbjct: 64  ------QFPALPLFELGYDVAHVGFDQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAA 117

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
                 +      I V  +++ +   LD    TY             L+D          
Sbjct: 118 TTEARALGATCGGIRVWSLYVPNGRALDDPHYTYKLD------WLAALRDTAEGWLRDDP 171

Query: 203 -VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P  + GD+N                           +  I                  
Sbjct: 172 AAPIALMGDWNIAPTDDDVWSTEFFAGCTHVSEPERKAFNAIVDAQFTDVVRPFTPGP-G 230

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +                +       + +GK  SDH P
Sbjct: 231 VYTYWDYTQLRFPKKQGMRIDFILGSPALA-------ARVMDAQIVREERKGKAPSDHAP 283

Query: 298 ISIDY 302
           + +D 
Sbjct: 284 VLVDL 288


>gi|269216697|ref|ZP_06160551.1| exodeoxyribonuclease III [Slackia exigua ATCC 700122]
 gi|269129931|gb|EEZ61014.1| exodeoxyribonuclease III [Slackia exigua ATCC 700122]
          Length = 264

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 81/308 (26%), Gaps = 75/308 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWN+N L                        +    LDAD+  LQE          
Sbjct: 1   MRLISWNVNGLRAVVKKGFN---------------EAFAALDADVFALQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +   +S      +          +  AV  +   +    +    A D+  R    
Sbjct: 45  LDLPGYVQNWSYAEKKGY----------SGTAVFSREEPLQVVHHVGTPALDTEGRICA- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-----DWITQK 198
                      +K W +D++  +     +         +   +  + L+     + +   
Sbjct: 94  --------CEFEKFWFVDVYTPNAQPELARLEHRMAWDAAFREFCKNLEAGVVPEGLGYA 145

Query: 199 KESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                P ++ GDFN                   +       + ++        F      
Sbjct: 146 SAEPKPVIMCGDFNVAHQEIDLKNPRSNRGNPGFSDEERSSFTSLLDAGFADTFRMLHPD 205

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              A      +           IDYF++       +   S  + +             SD
Sbjct: 206 LEGAYSWWSYRFNARKNNAGWRIDYFLVSDALRGAIESASIYDEV-----------MGSD 254

Query: 295 HCPISIDY 302
           HCP+ +D 
Sbjct: 255 HCPVGLDI 262


>gi|302537782|ref|ZP_07290124.1| exodeoxyribonuclease III [Streptomyces sp. C]
 gi|302446677|gb|EFL18493.1| exodeoxyribonuclease III [Streptomyces sp. C]
          Length = 259

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 79/303 (26%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N                  T+    L  + ++   D++ +QE          
Sbjct: 1   MRIATYNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCSAE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  R + +    +       +A+  +   +      L G  D       R
Sbjct: 41  ------QFPAAELRELGYESVVNATGRWNGVALLSRVG-LEDVVVGLPGGPDYEGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   ++     Y             L   I +      
Sbjct: 94  A-----ISATCGGVRVWSVYVPNGREVEHDHYGYK------LNWFGALATAIAEDAAGTR 142

Query: 204 PFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKDSRC-------------NANK 249
           PF + GDFN         D   +  +       R   E                      
Sbjct: 143 PFAVLGDFNVAPTDEDVYDPAVFAGLTHVTPAERAALEALRTAGLADVMPRALKYDRPYT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID    ++   K +            D  + +GK  SDH P+ +
Sbjct: 203 FWDYRQLAFPKNRGMRIDLVYGNEPFAKAVKDAYV-------DREERKGKGASDHAPVVV 255

Query: 301 DYD 303
           D D
Sbjct: 256 DLD 258


>gi|149188512|ref|ZP_01866805.1| hypothetical protein VSAK1_20994 [Vibrio shilonii AK1]
 gi|148837730|gb|EDL54674.1| hypothetical protein VSAK1_20994 [Vibrio shilonii AK1]
          Length = 334

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 107/335 (31%), Gaps = 52/335 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSL---WKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
             T +   K+++ + N+    E            + K+       L+Q    L++D+V  
Sbjct: 3   SNTLTQINKLKVTTCNLCNFVEPPFAYYEMENIYTAKQWQQKTLWLKQTLSELNSDVVAF 62

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ S  A+  +     +  +++             +    A A R   V      +  L
Sbjct: 63  QEVFSVEALRALVKSLGY-GYFTYNTEPRLESGYIYSHPALAFASRYPIV-----RHSNL 116

Query: 132 GAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSP----------- 179
            +   F    +R A+ + + I G  ++ + ++HLKS       EN  +            
Sbjct: 117 TSLAPFEGEFSRPALHISLNIEGIGELDMYNVHLKSKRPTLPDENLDNKSTVDAWLVETQ 176

Query: 180 ----SCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGNN------------- 221
               S  +  Q+A  L   I Q K     PF++ GDFN  I                   
Sbjct: 177 GQTLSSLMRIQEAGALHQAIVQNKRCYQRPFLLLGDFNNSIGSNEFEPFRSQYRHRRKDT 236

Query: 222 DDFWKTIDPNDSLIRFPKEKD-------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
               K    +DS    PK K             +    +   +D+ ++         +  
Sbjct: 237 RADIKAYHFHDSWDLVPKGKPVRPVDEIKPPITHYYGESGSRLDHILLSSEFCSNYERSM 296

Query: 275 FSEILYN------EDDIKSRGKRLSDHCPISIDYD 303
           F    Y        D I       +DH  +S+ ++
Sbjct: 297 FEVTDYQLTNKHIIDPIFGIDDLSTDHALVSVSFE 331


>gi|240851283|ref|YP_002972686.1| exodeoxyribonuclease III [Bartonella grahamii as4aup]
 gi|240268406|gb|ACS51994.1| exodeoxyribonuclease III [Bartonella grahamii as4aup]
          Length = 269

 Score = 88.8 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 84/307 (27%), Gaps = 68/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ +WNIN                        + QY +   AD++ LQE    +A+   
Sbjct: 3   FRIATWNIN----------------SIRLRLAQVFQYLELFSADVLCLQETKCPDAL--- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     + E         S    +  +A+  +      +       +D        
Sbjct: 44  ------FPVGAFEAAGYKHIALSGQKSYNGVAIVSRLPFKKVEKRFFCQNQDCRY----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + ++VE +G+ + + + ++ +    D  +   +          + +   I   +   +
Sbjct: 93  --ISVIVEAHGRNLRIHNFYVPAG--GDIPDADVNEKFQHKLDFLEEMSS-IRADQGDGL 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N       + ++    K +                   +             
Sbjct: 148 SSLLVGDLNIAPLAEDVWSHQQLLKVVSHTPIETERLQDLCCQGGWVDLMRLHIPVPTKL 207

Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +   F++  S               +R SDH P
Sbjct: 208 YTWWSYRARDWAFTDYGRRLDHIWSSPDLAPFVVDLSI-------FRDARGWERPSDHIP 260

Query: 298 ISIDYDF 304
           +   +DF
Sbjct: 261 VQTVFDF 267


>gi|300743782|ref|ZP_07072802.1| exodeoxyribonuclease III [Rothia dentocariosa M567]
 gi|300380143|gb|EFJ76706.1| exodeoxyribonuclease III [Rothia dentocariosa M567]
          Length = 275

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 83/310 (26%), Gaps = 64/310 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVAK 82
           +R+ S N+N +                 +    +  +    D DI+ LQE+ + +  V +
Sbjct: 1   MRVASVNVNGIRA---------------AYRKDMATWLAGRDVDILCLQEVRAPDKIVRE 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +  ++ W I ++       +        H       ++       + +       D+   
Sbjct: 46  LLNEDDWNILHAEAAAKGRAGVLVATRKHPNANGELLK-NQPVATRSTIGEDYFADAGRW 104

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                 +       G+ + V+  ++ S       ++        +  +   L        
Sbjct: 105 VEADYTL-----PTGETLTVVSAYVHSGEVGTPRQDDKYRFLDRMLVRLPELAQ------ 153

Query: 200 ESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDS 243
                 +I GD N     L   +                 F K            K    
Sbjct: 154 -HSDHVLIVGDLNVGHTELDIKNWKANQKRAGFLPEERAYFDKFFGEIGYEDVARKLAGE 212

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           IDY +         ++ +        D   S  +R SD
Sbjct: 213 VPGPYTWWSYRGKAFDNDAGWRIDYHMATPALAAKAVEATV-------DRAASYDERFSD 265

Query: 295 HCPISIDYDF 304
           H P+ +DY F
Sbjct: 266 HAPLVVDYQF 275


>gi|293400493|ref|ZP_06644638.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305519|gb|EFE46763.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 253

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VSWN+N +                         + + +DADI  +QE         +
Sbjct: 3   MKMVSWNVNGIRACMTKGFM---------------DFFQEIDADIFCIQETKMQPGQLDI 47

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    S            +   ++   V  K   +       +   D   R    
Sbjct: 48  ATPGYYQYINSA-----------DKKGYSGTMVFTKEKPIAVTYDLGIDEHDHEGR---- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  +++ ++  +        +               L        +   
Sbjct: 93  -----VITCEYENFYLVCVYTPNSKDGLLRLDYRMQWEDDFRAYLNAL--------KEKK 139

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                             T+  +  +  F      +    
Sbjct: 140 SVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERAKMTTLQQSGFIDSFRYLYPEQEGIY 199

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++A   + + S    ++            SDHCP+S
Sbjct: 200 SWWSYRFKAREKNAGWRIDYFLVSEDAKDKIQEASIHTDVF-----------GSDHCPVS 248

Query: 300 IDYDF 304
           +D DF
Sbjct: 249 LDIDF 253


>gi|15838527|ref|NP_299215.1| exodeoxyribonuclease III [Xylella fastidiosa 9a5c]
 gi|9107031|gb|AAF84735.1|AE004013_1 exodeoxyribonuclease III [Xylella fastidiosa 9a5c]
          Length = 264

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 73/304 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+ SWN+N+L+                   + L+Q+      D++ LQE         
Sbjct: 2   KMRIASWNVNSLN----------------VRLSQLQQWLVEAAPDVLGLQET-------- 37

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    + +    +    +  +A+  +      Q                
Sbjct: 38  --KLEDHQFPEAALAALGYVSVYAGQKTYNGVALLARVALEDVQV------GIPGFEDVQ 89

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +   V+     I V+++++ +   + + +  Y  S          +  W+ ++ +  
Sbjct: 90  RRVIAATVD----GIRVVNLYVVNGQEVGTEKYAYKLS------WLDAVYHWLAEELQRY 139

Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247
              V+ GDFN   +     D                          L    +        
Sbjct: 140 PRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERVALGKLLGLGLHDGFRLHHQDTGI 199

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID  ++ +     ++           D +    +R SDH P 
Sbjct: 200 FSWWDYRQASFRRNRGLRIDLTLVSEALRAQVVASGI-------DCVPRGWERPSDHAPA 252

Query: 299 SIDY 302
            I+ 
Sbjct: 253 WIEL 256


>gi|331694970|ref|YP_004331209.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190]
 gi|326949659|gb|AEA23356.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190]
          Length = 289

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 79/303 (26%), Gaps = 64/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VRL +WN+N                   +    L  +      D+V LQE        K+
Sbjct: 4   VRLATWNVN----------------SAKTRLPRLLPWLDQRAPDVVCLQE-------TKL 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F    R   +            +A+  +      +       +     +   
Sbjct: 41  ADADWAETFDDAMRERGYEVAHYGQGRWNGVALLSRVGLDDVERGLPAEPRFPDDDSAP- 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  L     G  + V  +++ +    D     Y        +    L+  +        
Sbjct: 100 EARALTATCGG--LRVTSVYVPNGRTPDDPHYAYK------LRWLDALQAMVAD--GPTA 149

Query: 204 PFVIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANK 249
             V+AGD N         D               K ++      L    +++        
Sbjct: 150 TSVVAGDMNIAPTDADVWDPSLFVDSTHVTPAERKALEALTGLGLHDVVRDRWPGQRVFS 209

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +         + ID  ++  +A   +            D    +G   SDH P+ +
Sbjct: 210 YWDYRAGRFHQDKGMRIDLVLVGDDAVGRVQAAWI-------DRQARKGSGPSDHAPVMV 262

Query: 301 DYD 303
           D D
Sbjct: 263 DLD 265


>gi|254413694|ref|ZP_05027463.1| exodeoxyribonuclease III [Microcoleus chthonoplastes PCC 7420]
 gi|196179291|gb|EDX74286.1| exodeoxyribonuclease III [Microcoleus chthonoplastes PCC 7420]
          Length = 264

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 97/307 (31%), Gaps = 71/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                RT  D   + Q+      D++ LQE  +       
Sbjct: 1   MKIATWNVN--------------SIRTRQD--HVCQWLTANPVDVLCLQETKVVDEQFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    + ++ S ++  N            A+  RK    V      +L  ++     G
Sbjct: 45  SRFEDLGYHLYVSGQKSYN----------GVALFSRKPLEAVTVGFTGVLTPEEVGELDG 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +R +  +++     + ++++++ +   + S +  Y  S        + LK+++    E+
Sbjct: 95  QKRLITGILD----GVRIINLYVPNGAEVGSEKYEYKLS------WLKLLKEYVRSLLET 144

Query: 202 LVP-FVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC 245
                 I GDFN   +    +                   + +        F K      
Sbjct: 145 QPHELCICGDFNIAPDDRDIHNPKNKDKHIMASPAERQALEEVLALGLGDAFRKFTQDGG 204

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           ID+  +    Y+   +          +       + SDH 
Sbjct: 205 H-FSWWDYRHGGFSRNRGWRIDHHYLTPKLYEAATRCRIDVEPRKLE-------KPSDHA 256

Query: 297 PISIDYD 303
           P+ ++++
Sbjct: 257 PVIVEFE 263


>gi|302336916|ref|YP_003802122.1| exodeoxyribonuclease III Xth [Spirochaeta smaragdinae DSM 11293]
 gi|301634101|gb|ADK79528.1| exodeoxyribonuclease III Xth [Spirochaeta smaragdinae DSM 11293]
          Length = 259

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 76/305 (24%), Gaps = 82/305 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAK 82
           R+ SWN+N +                 +    L +Y     AD+V LQE  +       +
Sbjct: 8   RIASWNVNGIRA---------------AQKKGLLEYMMQEHADVVCLQETKAKPEQLDEQ 52

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +   + +  ++S+     +          + +AV  +   +            +   A  
Sbjct: 53  LLNPSDYRSYFSSAERGGY----------SGVAVYSRKKPLSVSPL-----GIAEFDAEG 97

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+ +          +++ +  +     +  +     C         +           
Sbjct: 98  R-ALLVEFS----DFVLINGYFPNSQSEGARLDYKLAYC-------DAILKRCNSLVGEG 145

Query: 203 VPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              V+ GD+N                               +D   +        +    
Sbjct: 146 RHVVVCGDYNIAHKPIDLARPKENEGNPGFLPEERAWMSSFLDAGYTDTFRIFNNEGG-- 203

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           +DYF  D+     +        +             SDHCP
Sbjct: 204 NYTWWSYRTKGRERNVGWRLDYFCTDKEFENRVKNSEIRSEV-----------MGSDHCP 252

Query: 298 ISIDY 302
           + +  
Sbjct: 253 VVLTI 257


>gi|239945508|ref|ZP_04697445.1| putative phospholipase [Streptomyces roseosporus NRRL 15998]
 gi|239991973|ref|ZP_04712637.1| putative phospholipase [Streptomyces roseosporus NRRL 11379]
 gi|291448965|ref|ZP_06588355.1| sphingomyelinase C [Streptomyces roseosporus NRRL 15998]
 gi|291351912|gb|EFE78816.1| sphingomyelinase C [Streptomyces roseosporus NRRL 15998]
          Length = 326

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 89/297 (29%), Gaps = 31/297 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R++S+N    S+                    + + +     D+V +QE     A   
Sbjct: 37  SLRVLSYNAFLFSKTLY------PNWGQDHRAAEIPKTSFFQGNDVVVIQEAFDNGASDA 90

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134
           +         + T  +                       + +  K   V ++ + +    
Sbjct: 91  LLRNAAAQYPHQTPVIGRSKSGWDATGGSYSATTPEDGGVTILSKWPIVRKEQF-VFKDA 149

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  N+     ++ +NG ++ V+  H +S     S       +  + S+Q + +  +
Sbjct: 150 CGGDWFSNKGFAYAVLNVNGTRVHVVGTHAQSTDPGCSAG----EAAQMRSRQFKQMDAF 205

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKEKDSRCNA----N 248
           +      +    V+AGDFN   +            +   DS        D+R N+     
Sbjct: 206 LDAKNIPASEQVVVAGDFNVDGHSAEYASFLADAGLTTPDSRTGHTYSFDTRDNSIASER 265

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                +  +D+ +      K    ++      +     S   +      LSDH P+ 
Sbjct: 266 YPDDPREDLDHVLHRTGHAKPTGWKNDVIKEQSAPWTVSSWGKKYTYTNLSDHYPVI 322


>gi|118086197|ref|XP_418838.2| PREDICTED: similar to KIAA1706 protein [Gallus gallus]
          Length = 558

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/296 (9%), Positives = 74/296 (25%), Gaps = 37/296 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+                        ++          ++ +QE+    A+ K 
Sbjct: 253 LRVATWNLQ---------SCSIEKANNPGVREVICMTLLENSIKLLAVQELLDREALEKF 303

Query: 84  FPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
             +       +  +                S +      +            L+ +    
Sbjct: 304 CMELNQPTLPNIRKWKGPRGCWKGVVSEKPSGQLPKGVEYCGFLWDTTAGIELKDASSQE 363

Query: 132 G-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   R           ++    + ++++HL               S          
Sbjct: 364 NVQTNGNGRHSYPHPYIAHFKVGMNDLTLVNLHLALAPAAGDNAGKNHDSHK-----LAT 418

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDFN+  +   ++      +         P    +   + KN
Sbjct: 419 FAQTLQETLKGEKDVIILGDFNQAPDSSDHD-----ILRKEKFHHLVPSNTFTNI-STKN 472

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          SDHCP+  ++
Sbjct: 473 PQGSKSLDNMWISRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASDHCPVLAEF 528


>gi|120601181|ref|YP_965581.1| exodeoxyribonuclease III [Desulfovibrio vulgaris DP4]
 gi|120561410|gb|ABM27154.1| exodeoxyribonuclease III [Desulfovibrio vulgaris DP4]
          Length = 257

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 77/303 (25%), Gaps = 74/303 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           RLVSWN+N          W                +     AD+V LQE        K  
Sbjct: 4   RLVSWNVNGFRAVSSKPEW---------------NWFSTTTADVVALQE-------TKAD 41

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P        S +         +    ++ +AV  ++  +           D   R   R 
Sbjct: 42  PAQVGEEHRSPDGWHAWWLPATVKKGYSGVAVFSRHTPLDVA----YDLPDERFRGEGR- 96

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            + L       +    +I+  +    +              + A+ L+           P
Sbjct: 97  CLHLTFP----EFHFFNIYFPNGGMGEERLRYKMGYYEAFLEHAETLRR--------DRP 144

Query: 205 FVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            V+ GDFN                   +L     +         +  F   +    +   
Sbjct: 145 IVVCGDFNTAHRPIDLARPKENETVSGFLPEERAWMDRFVATGYVDTFRHVRGDEADRYS 204

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               K           IDYF + +     +                      SDHCP+ +
Sbjct: 205 WWSYKTRARARNVGWRIDYFFVSEELRGAVRDAWIE-----------MDVMGSDHCPVGL 253

Query: 301 DYD 303
           + +
Sbjct: 254 ELE 256


>gi|119486500|ref|ZP_01620558.1| possible endonuclease/exonuclease/phosphatase family protein
           [Lyngbya sp. PCC 8106]
 gi|119456402|gb|EAW37533.1| possible endonuclease/exonuclease/phosphatase family protein
           [Lyngbya sp. PCC 8106]
          Length = 333

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/329 (11%), Positives = 101/329 (30%), Gaps = 49/329 (14%)

Query: 21  AQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
            +  ++ ++N+  L           K S +      T +    + ++ADIV  QE+    
Sbjct: 3   PKNFKVATFNLYNLVLPNVTYYDRNKYSTEVYAQKKTWITGQLERMNADIVGFQELFHEQ 62

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA----- 133
           A+ ++        + +   ++ +    +   +   + +  +   +  Q Y          
Sbjct: 63  AIKEIVQNI--KSYENAHLVVGYPASYNPEQLRPLVGLVSRFPILNHQVYEDFPPQARLE 120

Query: 134 ---KDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS----------P 179
              KD      +R  +   ++I+   +  V  +HLKS   +   +   +           
Sbjct: 121 INDKDIPLDKFSRPILSAQLQISDSLECTVFVVHLKSKRPILPADADKNDPVEQAKGAAR 180

Query: 180 SCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYL----------------GNND 222
           +  L + +A  L+  + +  ++   P +I GD N     +                    
Sbjct: 181 ALILRATEATALRMILMETLKNRQHPVIIMGDVNDSGLSVTTQIITGQPPWEKLPFEKKK 240

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---------AYKFLIQE 273
           + W T+  +   I+  +        +        +D+ ++ +               +  
Sbjct: 241 EIWDTLLYSVKDIQARQSYGDFYYTHIYNGYYQALDHILVSEEWVAQNPSRLGQVEYVSI 300

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ++      +   K  SDH  +    
Sbjct: 301 LNDHLIDETLSYEDVEKWQSDHAQVVTTI 329


>gi|39936370|ref|NP_948646.1| putative exonuclease III [Rhodopseudomonas palustris CGA009]
 gi|39650225|emb|CAE28748.1| putative exonuclease III [Rhodopseudomonas palustris CGA009]
          Length = 260

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 76/304 (25%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V++ ++N+N ++                    +L  + K    DIV LQE+ +  A    
Sbjct: 5   VKIATFNVNNVN----------------KRLPILLAWLKTARPDIVCLQELKAAEA---- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  R   ++           +AV  +   ++     L GA        +R
Sbjct: 45  ------DFPEAALRKAGYAAAWVGQKSWNGVAVLARRREIVVTRRRLPGAP---HDKQSR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I V  ++  +       +     +        + L        +S  
Sbjct: 96  YIEAAV-----AGIIVGCLYAPNGNPQPGPKFDDKLA------WLKRLNRHAATLLKSGA 144

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN                           +  +                    
Sbjct: 145 PVVLAGDFNVVPTPADIYPGKSWDKDALVQPAPRKLFAALLRQGWTDALRHCHPEDA-PY 203

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID+ ++D +    L +          D         SDH P  
Sbjct: 204 TFWSYWRNRFERDAGLRIDHLLLDPSLAARLKRAGV-------DRKVREAPEASDHAPAW 256

Query: 300 IDYD 303
           I  +
Sbjct: 257 IVIE 260


>gi|302792615|ref|XP_002978073.1| hypothetical protein SELMODRAFT_108336 [Selaginella moellendorffii]
 gi|300154094|gb|EFJ20730.1| hypothetical protein SELMODRAFT_108336 [Selaginella moellendorffii]
          Length = 334

 Score = 88.8 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 85/332 (25%), Gaps = 52/332 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            R+VS+NI         SL+ +S     +  +    +     +LDAD++ LQE+  + + 
Sbjct: 1   FRVVSYNILAQVVYVKSSLFPHSPSLCLKWKTRSEQVLSRLLSLDADLLCLQELDEFESF 60

Query: 81  AK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------------------IAVRKK 119
            K +     +   Y                                        + +  +
Sbjct: 61  YKPLLESKGYSSIYVQRSGKKRDGCGIIYKAKCFSTITTSRLMKPQPEERRNPSVYIHTR 120

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRR-----AVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
              V   S P        S    R       +      N     ++ I      +  +L+
Sbjct: 121 RCIVSDFSVPEEENNRDVSDPRVRFRRNCVGIFSAFRFNHAPSNIVVIANTHLYWDPALQ 180

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
           +        L  +    +  I+Q+  S    ++AGDFN        N       +    +
Sbjct: 181 DVKLAQAKYLLAKLLQFEKEISQEFNSNPVVLVAGDFNSTPGDRVYNYITSGRRNSGPDV 240

Query: 235 ---------------------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQN--AYKFLI 271
                                  +   +      N        +DY     +       I
Sbjct: 241 ELSSFKVPDLESLKVPAIPLDSLYAAAQGEPAFTNCTPDFTGTLDYIFFSPSASMRPKTI 300

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            E       +           SDH PI  D+ 
Sbjct: 301 LEVPRPDAPDVKGGLPNHFHPSDHLPIGADFS 332


>gi|330888794|gb|EGH21455.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 380

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 96/325 (29%), Gaps = 68/325 (20%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+                  + + +    +   + +  ++   DIV 
Sbjct: 69  GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128

Query: 71  LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LQ +                   VA ++P +T   ++ +E + N     S      A   
Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGS-VGRKLATLS 187

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
           R       +   P+  A     +   + A+ +      +G K+ V++  L +        
Sbjct: 188 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228
                      +Q    +  + + +    P++I GDFN             + +      
Sbjct: 246 --------TAQKQIVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAADS 297

Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274
              +  +     P   +S    R     +  N   I       DY     +  +     S
Sbjct: 298 ELHELWEKYPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 353

Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299
                 +          +SDH P+ 
Sbjct: 354 ARVRRDDTLL-------ISDHLPVI 371


>gi|291007593|ref|ZP_06565566.1| hypothetical protein SeryN2_23964 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 295

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 76/292 (26%), Gaps = 34/292 (11%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +  +++ ++S+NI              S    ++   +L +        ++ +QE    
Sbjct: 30  PAQGERLHVMSFNIRY-----DSKAVPPSPDAWSTRRPILAELLNAESPTLLGVQEALYR 84

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                         +    R         +    T                P +    S+
Sbjct: 85  QVKQVHADIPAHYDWIGLGREGGGRGEFMSIYYDTRRVEPLDYDHFWLSDTPNVIGSASW 144

Query: 138 SRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                R    +       G++   ++ H                S +   + A  ++D I
Sbjct: 145 GNTVVRMVTWVRFRDLRTGREFTHVNTHFDH------------QSENSRQRSAALVRDRI 192

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
               ++ +P ++ GDFN +     +          +       +   +            
Sbjct: 193 AGF-DAGLPVLLTGDFNTRAGDSESYRILTSGGLADGWETAAERLTPAWGTFGGYEEPVE 251

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDY 302
               ID+ + +              +    +  +  G   SDH P+   ++ 
Sbjct: 252 GGDRIDWLLANDR---------VRVLKAAINPFRKDGWFPSDHLPVHALVEL 294


>gi|288960179|ref|YP_003450519.1| exodeoxyribonuclease III [Azospirillum sp. B510]
 gi|288912487|dbj|BAI73975.1| exodeoxyribonuclease III [Azospirillum sp. B510]
          Length = 257

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 81/302 (26%), Gaps = 71/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +   L+  + + +  D+   QE+    A    
Sbjct: 1   MKIATWNVN----------------SAKARLPLITDWLRAVSPDVALFQEIKCETAA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         +  +A+  K       +      +D  +R    
Sbjct: 42  -------FPRAAFEELGYHVNAVGQKAYNGVALLSKTPAEDVLTRLPGEPEDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE     + +  ++L +   +   +  Y        +    L D         +
Sbjct: 92  ------VEATVAGVRIASLYLPNGNPVPGEKFAYK------LRWMDRLYDHARGLLAREI 139

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD+N                       +   ++ +        +    D      
Sbjct: 140 PVVLGGDYNIIPEARDVFSPQAFAGDALFQPESRAKFRALLNLGLTEAYRALHDDDRAYT 199

Query: 249 KN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N + ID+F++   A   L            D      ++ SDH P+ +
Sbjct: 200 FWDYQAGCWPRDNGLRIDHFLLSPQAADRLAGC-------RIDRGPRGLEKASDHTPVVL 252

Query: 301 DY 302
           D 
Sbjct: 253 DL 254


>gi|228922454|ref|ZP_04085756.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228837168|gb|EEM82507.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 252

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +   ADI  LQE+        +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  +++ ++  +        +             + L        +   
Sbjct: 93  ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +      + +A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSCILEEGFIDTYRYLYPDQEDAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINTEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|221198450|ref|ZP_03571496.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M]
 gi|221208601|ref|ZP_03581602.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2]
 gi|221171592|gb|EEE04038.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2]
 gi|221182382|gb|EEE14783.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M]
          Length = 272

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/302 (9%), Positives = 78/302 (25%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE          
Sbjct: 15  MKIATWNVNSLN----------------VRKQHVLDWLAQSAVDVLCLQE---------- 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +    L      +           +
Sbjct: 49  LKLPDEKFPRADLEAAGYRSWFAGQKTYNGVAILAR--DTLPFDESDVVRNIPGFEDTQQ 106

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + + ++     + ++  +  +   + S +  Y        Q    L  W+  + +   
Sbjct: 107 RVIAVTID----GVRIVSAYFPNGQAVGSDKFLYK------MQWLDALHAWLRAEMQRYP 156

Query: 204 PFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 157 KLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHFAKLIELGFVDAFRRFEQPEKTFT 216

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D +    ++ SDH P+  
Sbjct: 217 WWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEV-------DRVPRTWEQPSDHTPVVA 269

Query: 301 DY 302
             
Sbjct: 270 VL 271


>gi|123440323|ref|XP_001310923.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
 gi|121892713|gb|EAX97993.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
          Length = 339

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 95/301 (31%), Gaps = 24/301 (7%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77
              +K++++ +N         +   +    R+      +  Y      D+V L+E   + 
Sbjct: 47  FETKKLKILDYNAFWRPTMLHMGREEWMRLRSKLLLEKIESY------DVVCLEEGFQFG 100

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           + +AK F +    + +            ++  I + + +  K   +   +          
Sbjct: 101 SDIAKNFIEGAKSLGFKYVLTSKLPPIYTHQVIDSGLIILSKFPIIESDTIRYTVFCGVD 160

Query: 138 SRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           S A  + ++   ++++ K  + +   HL++     + +        +  +Q   L  ++ 
Sbjct: 161 SFAA-KGSIYAKIQLDSKNHVHLFSTHLQASY--QNGQEPTVVDVLVRQKQFDQLSAFMA 217

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254
            K     P V+ GD N               +   +             +      +   
Sbjct: 218 TKVTDGYPAVLVGDLNVNSRLGDEYKSLLDHLKIPEYSCVDTLLTTHGEHPVTCGGDDDK 277

Query: 255 -----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        +DY  + +   K  ++ S+   +        +  +LSDH  +  +++
Sbjct: 278 VLPEPGDVGTHQSLDYIYLFEKHDKPQLKVSYKPEVNKMLVNGQKFFQLSDHFAVECEFE 337

Query: 304 F 304
           F
Sbjct: 338 F 338


>gi|312963202|ref|ZP_07777686.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6]
 gi|311282468|gb|EFQ61065.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6]
          Length = 362

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 100/343 (29%), Gaps = 74/343 (21%)

Query: 12  FLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YT 55
             V C A  A      Q +++++WN+  L+ +  V  +  +      D            
Sbjct: 36  LPVSCVAPRAPTLLPGQALKVMTWNVQYLAGKNYVFWYDTTDGSGPDDRPTVEDMAVSLD 95

Query: 56  LLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINH 101
            + +  ++   DI+ LQE+                   +  ++P +     +  + + N 
Sbjct: 96  EVARVIRDEQPDILLLQELDENAKPSHYQDQLALLQERLVDLYPCSAQAFDWKADFVPNL 155

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWV 159
                +     A   R +     +   P+  A     +   + A+ L      +G ++ V
Sbjct: 156 -HIFGSVGRKLATLSRYQIEHAERLQLPVPDANLISRQFQPKPALLLTYLPLSDGGQLAV 214

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           L+  L +     S           + +Q +     + + +    P++I GDFN       
Sbjct: 215 LNTRLDAGAPGRS----------AVQEQVKTTVKLLDKFEGRGTPWLIGGDFNLLPLGQF 264

Query: 220 NNDDFWKTID---PNDSLIRFPKEKDSRCNANKN-----------------LRNKIPIDY 259
              D  K       ++  + + K      N+  +                       +DY
Sbjct: 265 LRLDAGKRGQYSPDSELHLLWDKYPMIPSNSQSSGIDREQWLTHFPNDPGLDGPDRTLDY 324

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                     +    R+S+H P+   +
Sbjct: 325 LFYSP-----------RIKRVEAKVRQEDTLRISNHLPVIARF 356


>gi|91792822|ref|YP_562473.1| exonuclease III [Shewanella denitrificans OS217]
 gi|91714824|gb|ABE54750.1| Exodeoxyribonuclease III [Shewanella denitrificans OS217]
          Length = 269

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 85/310 (27%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIISFNINGL----------------RARLHQLQALIDSHQPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  Q       +D    A  R
Sbjct: 42  -------FPVADVEAMGYKVHYHGGKAHYGVAMLSKLEPIEVQKGFSTDEED----AQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + V++ +       DS+ +           Q   L   +        
Sbjct: 91  LIIGKFNQANGRVLTVINGYFPQG---DSIHHETKYPAKRKFYQ--DLMAHLDANHSPDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                        ++     ++   +     +  F     
Sbjct: 146 DIAIIGDINISPQDLDIGIGEVNAKRWLKTGKCSFQPEEREWLACLLDWGFIDSFRLLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +R         +           ID  ++  +    L++        + D      ++ S
Sbjct: 206 TREQRYSWFDYRSKGFDDNRGLRIDVILITASMTANLVES-------DVDYDLRGIEKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 259 DHAPIWSTFS 268


>gi|329940384|ref|ZP_08289665.1| exonuclease [Streptomyces griseoaurantiacus M045]
 gi|329300445|gb|EGG44342.1| exonuclease [Streptomyces griseoaurantiacus M045]
          Length = 259

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 79/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE  +       
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQEAKTTEE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +            +AV  +          L G          R
Sbjct: 41  ------QFPSEALRELGYESAVHATGRWNGVAVVSRVGLEDVVKG-LPGDPGYEGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V      + V  +++ +   +D     Y        Q  + L+  +        
Sbjct: 94  A-----VSATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALRAAVAGDAAGDR 142

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N         D                   ++         P+      +  
Sbjct: 143 PFAVLGDYNVAPTDEDVYDRAAFEGSTHVTPAERAALASLREAGLTDVVPRPLKYD-HPY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    ++   K +            D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVQDAYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D +
Sbjct: 255 VDLE 258


>gi|319404431|emb|CBI78034.1| exodeoxyribonuclease III [Bartonella rochalimae ATCC BAA-1498]
          Length = 260

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 89/302 (29%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNI                    + +  L ++ K    D+V LQE+ S +     
Sbjct: 1   MKIATWNIAG----------------IKARHETLCKWLKQNQPDVVCLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      T   + +            +A+  K V        +L    + +    R
Sbjct: 41  ------NFPRDTIENLGYHIETHGQKSFNGVAILSKTVPDEV----ILQLPGNNNDMQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   N   I V  ++L +   ++S +  Y           + L            
Sbjct: 91  Y-IETVYSTNTGSIRVASLYLPNGNPINSEKYLYKIE------WMKRLYTHAKSLLAYEE 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N                   +L      ++ I             D+   + 
Sbjct: 144 PLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIFQCITHLGFYDAIRNVTDAPSFSF 203

Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +         N I ID+ ++   A   L       I           ++ SDH PI I+
Sbjct: 204 WDFQANAWKKNNGIRIDHLLLSPEAADQL-------ICAYSQTEARGYQKPSDHVPIWIE 256

Query: 302 YD 303
            +
Sbjct: 257 LN 258


>gi|251773491|gb|EES54039.1| Exodeoxyribonuclease III [Leptospirillum ferrodiazotrophum]
          Length = 259

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 79/303 (26%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+L                      +  +      DI+ LQE    ++    
Sbjct: 1   MRVATWNVNSLP----------------VRLPQVLDWIDRKSPDILCLQETKVPDS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +         +  +A+  +            G  D   R    
Sbjct: 41  ------RFPAEPFRERGYDLLFRGQPTYNGVAILSRRPLSDPLR-DFPGEPDPECRL--- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + + ++++ +   LD+ +  Y  +          L   +  ++    
Sbjct: 91  ------LAATAGPLRLFNLYVPNGQDLDTPKYRYKLA------WLDRLAALLDDERRRHP 138

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDP----------NDSLIRFPKEKDSRCNANK 249
             V+ GDFN         D         + P          N       +          
Sbjct: 139 FLVLTGDFNIVPEDRDAYDPVALRGQIFLSPPEREALARIMNLGFRDAFRALHPDPGHFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID  +M  +    L            D    + +R SDH P+ +
Sbjct: 199 WWDYRQGMFRRNMGLRIDLILMASSLEPALTSAEI-------DREVRKNERPSDHAPVFV 251

Query: 301 DYD 303
           D+D
Sbjct: 252 DFD 254


>gi|333030431|ref|ZP_08458492.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
 gi|332741028|gb|EGJ71510.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
          Length = 343

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 97/348 (27%), Gaps = 56/348 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSV-----------KR 49
           ++ ++ A +F               ++ WN+  L + +  SL  ++             +
Sbjct: 1   MKHFLFAFLFCFTSPVFCQTNLPFNILFWNVENLFDCKHDSLKNDTDFLPESLKHWNTYK 60

Query: 50  TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
             +  T + +            I+ L E+ + + +  +  K           +       
Sbjct: 61  YRNKLTAIAKGVVAAGEWSSPAIIGLCEVENDSVLYDLTQKTNLRNIGYRYVVTQSE--- 117

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHL 164
               I  A+    +  R+ +    L   K        R  + +  V +    + +   H 
Sbjct: 118 DARGIDVALLYLPEYFRLTKHE-SLKVGKLKIGNRLTRDILHVEGVLLTSDTLDLFVAHF 176

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNND 222
            S             S     Q A+ L++ +            VI GDFN   +     +
Sbjct: 177 PSRFGG------RKYSEPNRIQVAKVLRNAVDSLFSIREKANIVIMGDFNDYPDNRCVTE 230

Query: 223 DFW-----KTIDPNDSLIRFPKEKDSRCN-ANKNLRNKIPIDYFVMDQNAY----KFLIQ 272
                   K I  +       ++++       K       +D+F++  N       F   
Sbjct: 231 ILNATAPTKEISKHQLYHLLARKREKYTWGTYKYKNEWGVLDHFIVSGNLLDHTQDFYTS 290

Query: 273 ESFSEI-----------------LYNEDDIKSRGKRLSDHCPISIDYD 303
           E  ++I                  +   +        SDH PI   + 
Sbjct: 291 EQQTDILKLGFLLIEDKKYGGSKPFRTYNGMQYQAGYSDHLPIRSTFT 338


>gi|240140848|ref|YP_002965328.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens AM1]
 gi|240010825|gb|ACS42051.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens AM1]
          Length = 269

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/306 (9%), Positives = 73/306 (23%), Gaps = 66/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                        + ++ +    D++ LQE         +
Sbjct: 3   LTVTTWNIN----------------SVRLRIESVLRFLREAQPDVLCLQETKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +            +   +    +  +A+  +   + +         D+      R
Sbjct: 44  FPLKAFKG------SGYENIVFAGQKGYNGVAIISRFPLLTRDVMSFCERPDA------R 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +L    G    ++          D      +P  +        L+ W  ++     
Sbjct: 92  HISAVLGPEAGPAAGIVLHDFYVPAGGDMPHRDLNPKFAHKLDFLSELRVWGGRRVSG-- 149

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                   +     +           +             
Sbjct: 150 PAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVETEALETLRGEAGWIDAARLLTPEPEKI 209

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  +          +             ++ SDH P
Sbjct: 210 YTWWSYRSPNWELANKGRRLDHTWVSPDLAG-------TVRRVAVFREARGWEKPSDHVP 262

Query: 298 ISIDYD 303
           +++  +
Sbjct: 263 VTLTLE 268


>gi|149199705|ref|ZP_01876737.1| hypothetical protein LNTAR_25155 [Lentisphaera araneosa HTCC2155]
 gi|149137222|gb|EDM25643.1| hypothetical protein LNTAR_25155 [Lentisphaera araneosa HTCC2155]
          Length = 275

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 53/309 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           I+   L   +  +  +   A        VR+ S+N+                   ++   
Sbjct: 4   IKLLALTFAYLCIFTSNLTASEPDKSLTVRVASYNVEFG---------------KSATPE 48

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            + +  K  + DI+   E    +  A+V         +            ++ D +  I 
Sbjct: 49  QIGEMFKPYNLDIIGFDEAPDGDWTARVGKVLGMKYSFV-----GKISSANHKDKYKTIL 103

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
            R    R ++    +    D         AV  + +I+G  I    +H+ S         
Sbjct: 104 SRTPLERKVEHDLSV----DRRRCWNPASAVRAVTKIDGVAIAFYSLHICST-------- 151

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                   +    + + + +   KE+    ++ GDFN  I     N             +
Sbjct: 152 ---RDREKIGHAYKLVGEVLR--KETTERVIVVGDFNNNIGDAAMNTFKKAGFKATWKDL 206

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +    K+   NA    +N   ID+ +   +A   +      E+             LSDH
Sbjct: 207 KIDVSKEYTYNAFDPKKNLGVIDHILCKTSAGAKVTAGGIIELKKP----------LSDH 256

Query: 296 CPISIDYDF 304
            PI  +  F
Sbjct: 257 KPIWAEIIF 265


>gi|221194898|ref|ZP_03567954.1| exodeoxyribonuclease III [Atopobium rimae ATCC 49626]
 gi|221184801|gb|EEE17192.1| exodeoxyribonuclease III [Atopobium rimae ATCC 49626]
          Length = 281

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 76/313 (24%), Gaps = 76/313 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +  ++ +  SWN+N L                        +  + +DADI  LQE 
Sbjct: 20  SSNTADTKEYKFASWNVNGLRAVLKKDPSF-------------TEIFETIDADIFALQET 66

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   +                  +   +    ++  AV  +   +           
Sbjct: 67  KLQEGQVDL-----------DIPSYFQTWNYAERKGYSGTAVFSREEPLQVIRQIGSPVA 115

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D+  R         +  +   + W +D++  +     +  +               L   
Sbjct: 116 DNEGR---------VCALEFDRFWFVDVYTPNSKEQLARLDERLVWDERYRDFIAEL--- 163

Query: 195 ITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPK 239
                 +  P +  GDFN                         + +  +        F  
Sbjct: 164 -----SAQKPLITCGDFNVAHTEIDLKNPSSNHKNAGFSDEERESFTKLLDAGFTDTFRY 218

Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                  A      +           IDYF++     + +   +    +Y          
Sbjct: 219 RHPDVTGAYSWWSYRFNARKNNAGWRIDYFLVSNRIAQQITGAAILNEVY---------- 268

Query: 291 RLSDHCPISIDYD 303
             SDHCP+ +  +
Sbjct: 269 -GSDHCPVELTIE 280


>gi|194334185|ref|YP_002016045.1| endonuclease/exonuclease/phosphatase [Prosthecochloris aestuarii
           DSM 271]
 gi|194312003|gb|ACF46398.1| Endonuclease/exonuclease/phosphatase [Prosthecochloris aestuarii
           DSM 271]
          Length = 325

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/333 (12%), Positives = 83/333 (24%), Gaps = 63/333 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNL 64
            TA+   ++  + WN+  L +     L  +           + KR    Y  L    K  
Sbjct: 7   ATAAKENQLLFMWWNVENLFDTIDDPLTNDNEFTPEGSRHWTPKRLALKYLRLAHIIKLA 66

Query: 65  D--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                     DI+ L E+ +      +               I +        I  A+A 
Sbjct: 67  GAEKSMNGYPDILALAEVENKQVFRTLLS-----FLPDHHYHIVYHNSRDPRGIDIALAY 121

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +++  L      +           R            + +++  H  S          
Sbjct: 122 NSQSLHHLASRQVKIPLSG----KATRDISLHEFTTVNTRFFLIVNHWPSRSLD------ 171

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                  L  QA      I     +  P    ++AGDFN + +         ++I+    
Sbjct: 172 -RKWSEPLRLQAAESARAIVDSLLAQDPASNIIVAGDFNDEPDDPSIRQ-ILRSINDRKK 229

Query: 234 LIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY------ 280
           ++         C        +         +D  ++ ++          S   +      
Sbjct: 230 VLGPSPLYLYNCWAQSDVPGSYHYRNRWNRLDQIMVSRSLLDGRRGLQISNSSFSCFRPE 289

Query: 281 -----------NEDDIKSRGKRLSDHCPISIDY 302
                                  SDH P+ +D 
Sbjct: 290 QMQEPGSGIPSRTWKGIRHRGGYSDHYPLLLDI 322


>gi|332975843|gb|EGK12721.1| hypothetical protein HMPREF9374_1315 [Desmospora sp. 8437]
          Length = 253

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/282 (10%), Positives = 71/282 (25%), Gaps = 46/282 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+L+ +NI      +G             D   + +  +    D+V L E+       + 
Sbjct: 3   VKLMGYNIRHGLGCDG-----------RLDLERIARVIEREAPDLVGLNEVDVR-FHRRS 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +          + +       +       A     +    + + +   +        
Sbjct: 51  AFTDQLGWLAERLGMESLFGPAIRHTEVAGETAGYGNGLLFKGEVHHVRNRRVERRGEEP 110

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +       G+ + +  +                    +  QQ   L   + + ++  
Sbjct: 111 RALLVAEWIPPGETVSIRVVVTHMGLNP-----------WMRRQQVDLL---LEECRDPA 156

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V  GD+N                     L+    E     +       +  IDY   
Sbjct: 157 QPVVALGDWNVTPRRPAVTRL-------APFLLDTLGESGVSASTYPCPSPRKRIDYIFC 209

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            ++ ++       +                SDH P+    ++
Sbjct: 210 SRHFHRETASVVVTPGC------------PSDHLPVLSVLNW 239


>gi|108759756|ref|YP_628914.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108463636|gb|ABF88821.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 360

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/328 (12%), Positives = 95/328 (28%), Gaps = 52/328 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQ 72
                    +R+V++N+                KR       +     +LD   D+V LQ
Sbjct: 27  SALPMSPSPLRIVTYNVRYFGHMLRGLASTVGPKR------RVAAALASLDPLPDVVCLQ 80

Query: 73  EMGSYNAVAKVFPKNTWCI-----------------------FYSTERLINHSKRDSNND 109
           E+ + +  + +  +                            + +     +H K    + 
Sbjct: 81  EVETSSLRSNIADRPKQPGETQLTAFMGRMVETFDRLGREMPYEAFYFRAHHYKLREVSL 140

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFS--------RAGNRRAVELLV--EINGKKIWV 159
             T +AV     ++   ++ +   +            R  +R    + +    +     +
Sbjct: 141 YTTGLAVLVNTRKLEVATHNVGAPQAITHHHVQRLKDRKQSRICAHMRLLRREDRHPFHI 200

Query: 160 LDIHLKSFCFLDSLENTYSPSC---SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
            + HL                         +A+ L +++ Q      P+++ GDFN    
Sbjct: 201 FNTHLSLPTPFAREFWATRDKMGGGVNQLHEARKLTEFM-QGLTGDEPYIVCGDFNSPPA 259

Query: 217 YLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                      +      ++ +              L  ++ +D+        ++L    
Sbjct: 260 SPVYRYLTTDGRLTCAQAAVGQIDPNVSRGFPTAGFLHMRMHLDHVF-SGAGVRWLD--- 315

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++      D++SR   LSDH PI   +
Sbjct: 316 -TQETSPFGDLRSRFHGLSDHMPIVARF 342


>gi|30021833|ref|NP_833464.1| exodeoxyribonuclease III [Bacillus cereus ATCC 14579]
 gi|229129016|ref|ZP_04257989.1| Exodeoxyribonuclease [Bacillus cereus BDRD-Cer4]
 gi|29897389|gb|AAP10665.1| Exodeoxyribonuclease III [Bacillus cereus ATCC 14579]
 gi|228654253|gb|EEL10118.1| Exodeoxyribonuclease [Bacillus cereus BDRD-Cer4]
          Length = 252

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +   ADI  LQE+        +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  +++ ++  +        +             + L        +   
Sbjct: 93  ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +     ++  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRENPGFSDEEREKFSCILEEGFIDTYRYLYPNQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSEGMKDQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|315148697|gb|EFT92713.1| exodeoxyribonuclease III [Enterococcus faecalis TX4244]
          Length = 251

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------ESHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|206579947|ref|YP_002239572.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella
           pneumoniae 342]
 gi|288936416|ref|YP_003440475.1| endonuclease/exonuclease/phosphatase [Klebsiella variicola At-22]
 gi|290510529|ref|ZP_06549899.1| endonuclease/exonuclease/phosphatase [Klebsiella sp. 1_1_55]
 gi|206569005|gb|ACI10781.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella
           pneumoniae 342]
 gi|288891125|gb|ADC59443.1| Endonuclease/exonuclease/phosphatase [Klebsiella variicola At-22]
 gi|289777245|gb|EFD85243.1| endonuclease/exonuclease/phosphatase [Klebsiella sp. 1_1_55]
          Length = 253

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 80/291 (27%), Gaps = 49/291 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    + +++ N +                        LR   +++ ADIV LQE+   
Sbjct: 4   PTSGFSLNVLTINTHKGFTAFNRRF----------ILPELRDAVRSVSADIVCLQEVMGA 53

Query: 78  NAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           + V  +    +P  T   F +     +++        + H   AV  +            
Sbjct: 54  HEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----YYE 108

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               S      R  +   +      + +  I +      D               Q   L
Sbjct: 109 NRDISVGNGEKRGLLYCRIVPPESGVTIHVICVHLGLRADQ-----------RQAQLTML 157

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            +W+     +  P V+AGDFN               ++       F + +          
Sbjct: 158 AEWVNT-LPAGEPVVVAGDFNDWRQQANQPLKAQAGLEE-----IFTRARGRPARTFPVS 211

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + +D   +           +  +            + LSDH P+S++ 
Sbjct: 212 FPLLRLDRIYVKNAHASHPKALALKQ-----------WRHLSDHAPLSVEI 251


>gi|188994231|ref|YP_001928483.1| exodeoxyribonuclease III [Porphyromonas gingivalis ATCC 33277]
 gi|188593911|dbj|BAG32886.1| exodeoxyribonuclease III [Porphyromonas gingivalis ATCC 33277]
          Length = 254

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 91/304 (29%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+N+N L                 +    L  + +  + D++ LQE  M +     
Sbjct: 1   MKIISYNVNGLRA---------------AMKKDLIGWLREENPDVLCLQETKMQNDQFEK 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  +  + +   +          + +A+  K+    Q  +   G       A 
Sbjct: 46  EEFEALGYRSYLFSAQKKGY----------SGVAIITKH----QPDHIEYGMGMEEYDAE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + ++ ++  S    D  +       +      +  + ++ + ++S
Sbjct: 92  GRF-----IRADFGDLSIVSVYHPSGTSGDERQ-------AFKMVWLEHFQSYVNELRKS 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247
               ++ GD+N     +  +D                W +    D  +   +        
Sbjct: 140 RPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMSRFLADGYVDTFRHTHPELVL 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY ++  N    +          +           SDHCPI
Sbjct: 200 YSWWSYRFQARSRNKGWRIDYCMVTNNLADRIKGAYILNEAVH-----------SDHCPI 248

Query: 299 SIDY 302
            ++ 
Sbjct: 249 VLEI 252


>gi|83942866|ref|ZP_00955326.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter
           sp. EE-36]
 gi|83845874|gb|EAP83751.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter
           sp. EE-36]
          Length = 341

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 88/336 (26%), Gaps = 56/336 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQEMG 75
           +R+ ++N+   +               ++            L    + +DAD V + E  
Sbjct: 1   MRIATYNVEWFTGLFDDEDQLLLDDGWSARHNITRAQQAQALGTVFRAMDADAVMVIEAP 60

Query: 76  SYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126
             +     V     +   +            ++     A+ +    +             
Sbjct: 61  DQSRKRGTVAALERFAAHFDLRTRKAVIGFANDTQQEIALLLDPDRLSASHAPGGSVGQG 120

Query: 127 ---------SYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENT 176
                       L           ++  +EL +    G    ++  HLKS     +    
Sbjct: 121 DAPRFDGTLDIDLDIDAREDHVVFSKPPLELDIVTCEGVAFHMIGAHLKSKAPHGAKTPQ 180

Query: 177 YS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK----- 226
            +      +      QA WL+  I  + +   P ++ GD N         D F +     
Sbjct: 181 DALRIGIANRRKQLAQAIWLRRRIDARLDDGTPLMVLGDLNDGPGLDSFEDLFGRSSVEI 240

Query: 227 ---------TIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQ 272
                     +DP+       +       +           +  +DY ++          
Sbjct: 241 VMGHRQDRALVDPHAIRALGQRIGAMPTTSRFWIAPEKRYLQALLDYIMISPALTAHRPH 300

Query: 273 ESFSEILYNEDDIKSRGKR-----LSDHCPISIDYD 303
                 L + +       R      SDH P++ID D
Sbjct: 301 WRIWHPLDDPECWGDAALRDALITASDHFPVTIDLD 336


>gi|260754011|ref|YP_003226904.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258553374|gb|ACV76320.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 261

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 86/304 (28%), Gaps = 73/304 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ S+N+N ++                +    L ++ +    DI+ LQE+ S +A     
Sbjct: 3   KIASFNVNGIN----------------ARLPRLIEWLEKFQPDILCLQELKSDDA----- 41

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                           +         +  +A+  K     Q         D      +R 
Sbjct: 42  -----RFPQEEIEKTGYYCLYHGQKAYNGVAILSK----EQPKLIRTSLPDDPDPTQSRY 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +E     + V  ++L +   L+S +  Y  +        +          +   P
Sbjct: 93  -----IEAEIDNLTVASLYLPNGNPLNSPKYDYKLA------WFKAFLAHARSLWQQEKP 141

Query: 205 FVIAGDFNRKINYL-----------------GNNDDFWKTIDPNDSLIRFPKEKDS---- 243
            ++AGD+N   ++                    +  +W+ +              S    
Sbjct: 142 VILAGDYNVVPSFDIKDIRNAAALADNALLAPESLFYWRQLLAMGWTDSLRVRHLSEPLY 201

Query: 244 RCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID+ ++  +    L            D      ++ SDH P+ 
Sbjct: 202 SFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGV-------DRQMRGQEKASDHAPVW 254

Query: 300 IDYD 303
           I+ D
Sbjct: 255 IEID 258


>gi|297846518|ref|XP_002891140.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297336982|gb|EFH67399.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 419

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 90/325 (27%), Gaps = 46/325 (14%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           K RLVS+NI      +   +     +  +  +    +    KNL AD   LQE+  Y++ 
Sbjct: 93  KFRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLKADFFCLQEVDEYDSF 152

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +   ++        +R     +         + A      R+           DS S +
Sbjct: 153 YRNNMESLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCS 212

Query: 141 GNRR----------------------------AVELLVEINGKKIWVLDIHLKSFCFLDS 172
             +                              +     IN     ++ +      +   
Sbjct: 213 EQKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFHHIVIVANTHLYWDPE 272

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-------- 224
           L +        L  +    K  I+ + E     ++AGDFN     +  N           
Sbjct: 273 LADVKRAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYNYLVSGNAKPAE 332

Query: 225 --WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-- 280
              +   P      +   +      N        +DY  +  +   F+   S  ++    
Sbjct: 333 TTEEEEAPVPLSSVYEVTRGEPKFTNCTPGFTNTLDYIFISPS--DFIKPVSILQLPEPD 390

Query: 281 --NEDDIKSRGKRLSDHCPISIDYD 303
             +           SDH PI  +++
Sbjct: 391 SPDIVGFLPNHHHPSDHLPIGAEFE 415


>gi|294815857|ref|ZP_06774500.1| Exonuclease [Streptomyces clavuligerus ATCC 27064]
 gi|294328456|gb|EFG10099.1| Exonuclease [Streptomyces clavuligerus ATCC 27064]
          Length = 269

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 74/305 (24%), Gaps = 70/305 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ +WN+N                  T+    L  + ++   D++ +QE         
Sbjct: 10  SMRIATWNVN----------------SVTARLPRLLAWLESSGTDVLCIQETKCAEE--- 50

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                         R I +      +     +A+  +          L G          
Sbjct: 51  -------QFPAEELREIGYESAIHADGRWNGVALVSRVGLDEVVKG-LPGGPAYDGAQEP 102

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +      + +  +++ +   +      Y        +    LK+ +       
Sbjct: 103 RA-----ISATCGPVRLWSVYVPNGREVTHDHYAYK------LEWLAALKEAVAADAAGP 151

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            PF + GD+N                              +         P+      + 
Sbjct: 152 RPFAVLGDYNIAPADEDVWDRAAFEGSTHVTEPERAALAALRETGLSDVVPRPLKYD-HP 210

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID    +      +            D  + +GK  SDH P+
Sbjct: 211 FTYWDYRQLCFPKNRGMRIDLVYGNGPFAGAVKDSYV-------DREERKGKGASDHAPV 263

Query: 299 SIDYD 303
            +D D
Sbjct: 264 VVDLD 268


>gi|218780993|ref|YP_002432311.1| endonuclease/exonuclease/phosphatase [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762377|gb|ACL04843.1| Endonuclease/exonuclease/phosphatase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 250

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 79/283 (27%), Gaps = 36/283 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
                ++ N+     ++G   W+              +  +    DI+ +QE   + A  
Sbjct: 2   DSFSAMTANLRFGRARDGEHGWEFRK-------DAFMKLFRTYKPDILAVQEANDFQAEH 54

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +   ++  R        SN          KK+  +     P            
Sbjct: 55  LIQRMEDYD--HAGFRKNAPDFWQSNILFFKKPWSLKKHRHIFYSDTPD-EESKWKDSKW 111

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R+   + +E  GK +  +D H      + +               A+ L + +      
Sbjct: 112 PRQGTLVQLEKGGKTLACVDTHYDFKPEVQARS-------------ARLLLNILEDFAP- 157

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            +P ++ GDFN K +         K  +       F K      +      +   ID+ +
Sbjct: 158 GLPTLVMGDFNAKPDSS-----CRKEFEQGGFKDPFDKRFGGTHHGFTGKDDGRRIDWIL 212

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          +        +  G   SDH  +  ++ +
Sbjct: 213 YRGGIEP-------VKASRKIIRGRFGGVYPSDHFQVYCEFTW 248


>gi|89072881|ref|ZP_01159438.1| endonuclease/exonuclease/phosphatase family protein [Photobacterium
           sp. SKA34]
 gi|89051403|gb|EAR56858.1| endonuclease/exonuclease/phosphatase family protein [Photobacterium
           sp. SKA34]
          Length = 351

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 102/342 (29%), Gaps = 54/342 (15%)

Query: 14  VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIVF 70
            P       ++++ S+N+ N L+       ++N  S ++       L         DI+ 
Sbjct: 9   FPLVPIAQSEIKIASFNLLNYLAPPNAYYDFENIYSYEQWHKKQHWLTSILDAQQPDIIG 68

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
            QE+ S + +  +     +   ++                  AIA +     V+      
Sbjct: 69  FQEVFSADELKALLRDIGYP-HFAVVDKPKVEGDFIYRSPVVAIASKFPITEVIAVEADN 127

Query: 131 LGAKDSFS--RAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSP------ 179
             A+       + +R+ +   V+I        +V  +  K   F D L  T +       
Sbjct: 128 EAAQLMGWAEFSFSRKPLRATVDIPHIGATDCYVTHLKSKRSLFDDPLPETIAKTGSALS 187

Query: 180 -----------SCSLLSQQAQWLK-DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                      S  L   +A  L+   + +++++  P V+ GD+N  I+     +     
Sbjct: 188 SFLGQRLGSWGSSMLRGTEAALLQLAMVKRREQTSNPMVLCGDYNDVISSSCLEELTASR 247

Query: 228 -----------------IDPNDSLIRFPKEKDSRCNA--NKNLRNKIPIDYFVMDQNAYK 268
                            +     L      +D       +        +DY ++ Q    
Sbjct: 248 VYGMSESDTERLINFYCLYDGWQLYTQINPQDEETRPATHYYNGKGSVLDYILLSQEFNA 307

Query: 269 FLIQESFSEILYNEDD------IKSRGKRLSDHC-PISIDYD 303
             +   F    Y+ +D              +DH  PI +   
Sbjct: 308 RYLGSLFEVSHYHTEDKHLVNSSFDIDGYSTDHAIPI-VTLS 348


>gi|149191818|ref|ZP_01870055.1| exonuclease III [Vibrio shilonii AK1]
 gi|148834336|gb|EDL51336.1| exonuclease III [Vibrio shilonii AK1]
          Length = 268

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 85/306 (27%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+        D++ LQE+  ++     
Sbjct: 1   MKVISFNINGL----------------RARLHQLQALIDKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +A+  K   +  Q       +D       R
Sbjct: 42  -------FPVEAVEAMGYKVYFHGQKAHYGVAMLCKQEPISVQKGFPTDNEDHQK----R 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    ++ G K+ VL+       F      ++           + L  ++ +   +  
Sbjct: 91  MIMATFEDVKGDKVTVLN-----GYFPQGDNISHETKFPYKEAFYKDLMTYLNEHHSNDE 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++     ++ +T+     +  F +   
Sbjct: 146 KLIVMGDINISPIDLDIGIGEPNRKRWLKTGKCSFQPIEREWLQTLLDWGFVDTFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +  +       +           ID  +  ++  +   +          D      ++ S
Sbjct: 206 NVDDQFSWFDYRSRGFDDNRGLRIDVVLATKSLAETCSEAGI-------DYELRGIEKPS 258

Query: 294 DHCPIS 299
           DH PI 
Sbjct: 259 DHAPIW 264


>gi|67516221|ref|XP_657996.1| hypothetical protein AN0392.2 [Aspergillus nidulans FGSC A4]
 gi|40747335|gb|EAA66491.1| hypothetical protein AN0392.2 [Aspergillus nidulans FGSC A4]
 gi|259489365|tpe|CBF89576.1| TPA: endonuclease/exonuclease/phosphatase family protein
           (AFU_orthologue; AFUA_1G01540) [Aspergillus nidulans
           FGSC A4]
          Length = 419

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 99/311 (31%), Gaps = 32/311 (10%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            K  + L+  +    A+      ++S+N+  L E    +         T +  L+ +   
Sbjct: 1   MKSTITLLSLVPSTLAATTGSFNILSFNVAGLPEIFNSNDVPGDK---TENTELIGERFA 57

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               DI+ +QE  +Y+A         +       R          + ++T        + 
Sbjct: 58  EYSYDIIHVQEDFNYHAA-------LYSTDTHPYRTSTSGGVPFGSGLNT--LSNYDWID 108

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
             +  +        F     +    + V++    ++V   +L +    +          S
Sbjct: 109 FERVKWDTCSDASGFDCWTPKGFTVMRVKLEDG-VYVDCYNLHADAGSEE------EDVS 161

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKE 240
           + S   Q + D+I+         ++ GD N +    G N   ++T +   N  +      
Sbjct: 162 IRSANLQQVSDYISANSI-GNAVLVYGDTNARYTSSGENIRTFETQNGMVNPWVELVLDG 220

Query: 241 KDSR-------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            +         C      +    +D      +    L   S+    Y ++   + G  LS
Sbjct: 221 VEPTEGTDAVVCENPTTTQTCETVDKIFYRGSPALALQALSW---AYEDEKFLNNGSILS 277

Query: 294 DHCPISIDYDF 304
           DH PI+  + +
Sbjct: 278 DHNPITSRFTW 288


>gi|220933285|ref|YP_002512184.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219994595|gb|ACL71197.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 294

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 80/303 (26%), Gaps = 56/303 (18%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTL-----SEQEGVSLWKNSVKRTTS--DYTLLRQYA 61
           L+           Q++R++S+N+              + WK+ +       +   + ++ 
Sbjct: 25  LLEVGPSTPPLAGQRIRVLSYNVQVGISATRFHHYFTNSWKHVLPYQGRLGNLDSVARFI 84

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                D+V LQE+ + +  ++      +    S           S  + +     +    
Sbjct: 85  SGF--DLVGLQELDAGSLRSQFINLAQYLSERSDLP-----YWYSQTNRNLGKIAQHSLG 137

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            + +     +      S    R A+E     E     + ++ +HL               
Sbjct: 138 LLSRYHPHTVVEHRLPSVIPGRGALEAHFGAEQGSGSLVIMLVHLSLGKRD--------- 188

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                  Q +    +I +        V+ GD N   +         +T            
Sbjct: 189 ----RRLQME----YIAEVLRDHEHVVVMGDMNCSCHADEVKRLVRQTRLQEPLAAH--- 237

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                     + R     D+ ++        +                     SDH P+ 
Sbjct: 238 ------KTYPSWRPAHAFDHILVTPGLGVEQV--------------HVYNVNYSDHLPVG 277

Query: 300 IDY 302
           ++ 
Sbjct: 278 VEI 280


>gi|318081282|ref|ZP_07988614.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actF]
          Length = 259

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 72/304 (23%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE  +       
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKTTAE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +    +       +AV  +       S  L            R
Sbjct: 41  ------GFPTEALREAGYESAVNATGRWNGVAVISRAGLDDVVSG-LPDQPAYDGVMEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +      Y        +  + L+  +        
Sbjct: 94  A-----LGATCGPVRVWSVYVPNGREVGHPHYAYK------LEWLEALRAAVAGDAAGTR 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N                              +         P+         
Sbjct: 143 PFAVMGDYNVAPGDEDVYDPAVFEGLTHVTPPERAALAELRATGLGDLVPRPLKYD-RPY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +                   D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLAFPKNRGMRIDLVYANAAFRSAAKDAYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|257482179|ref|ZP_05636220.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 380

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 96/325 (29%), Gaps = 68/325 (20%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+                  + + +    +   + +  ++   DIV 
Sbjct: 69  GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128

Query: 71  LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LQ +                   VA ++P +T   ++ +E + N     S      A   
Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGS-VGRKLATLS 187

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
           R       +   P+  A     +   + A+ +      +G K+ V++  L +        
Sbjct: 188 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228
                      +Q    +  + + +    P++I GDFN             + +      
Sbjct: 246 --------TAQKQVVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAADS 297

Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274
              +  +     P   +S    R     +  N   I       DY     +  +     S
Sbjct: 298 ELHELWEKYPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 353

Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299
                 +          +SDH P+ 
Sbjct: 354 ARVRRDDTLL-------ISDHLPVI 371


>gi|256616763|ref|ZP_05473609.1| exonuclease III [Enterococcus faecalis ATCC 4200]
 gi|256596290|gb|EEU15466.1| exonuclease III [Enterococcus faecalis ATCC 4200]
          Length = 251

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNIN L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNINGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|330993300|ref|ZP_08317236.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1]
 gi|329759702|gb|EGG76210.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1]
          Length = 261

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 74/302 (24%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LV+WN+N                        +  Y      D++ LQE+     +   
Sbjct: 2   MKLVTWNVN----------------SIRQRCDHVLDYLAREQPDVLALQEIKCATDL--- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +         +  +A+  +    +                   
Sbjct: 43  -------FPADAFRKAGYECTAVGQKSYNGVAMLARQPFTVTH------TALPGWETTPP 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           +A  + +   G  + V +++L +     S       +        + L        ++  
Sbjct: 90  QARYVEIRTGG--LVVGNLYLPNGNSGGSAGYDSKLAF------MEALALHARGLLQAGQ 141

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            FV+ GD+N                       +   ++ +              +     
Sbjct: 142 DFVLMGDYNVCPTDEDCAPGALPPTDALVRPESRAAFRRLLWLGLTDALRALHPAGRFYT 201

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+ ++     + L       +       +    + SDH P++I
Sbjct: 202 FWDYQAAAWQRDSGLRIDHALLSPRVAERL-------LTALPARDERGKPQPSDHVPLAI 254

Query: 301 DY 302
             
Sbjct: 255 TL 256


>gi|326335303|ref|ZP_08201498.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325692574|gb|EGD34518.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 343

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 81/311 (26%), Gaps = 63/311 (20%)

Query: 8   ALVFFLVPC----TASVAQKV------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
            L F  +P            +       ++S+N+  L+  +                  +
Sbjct: 76  VLFFLGLPFMHRFVQFSQNTLPPKGQPSIMSFNVRLLNHYKWSKDLTLR--------EKI 127

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             + +    +IV LQE        + FP   +  F                +     A+ 
Sbjct: 128 ISFLREEHPNIVALQEFYKKE--NESFPFYKYKRFIYKNE-----------NDKIGQAIL 174

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                +   S       ++         V   + +    + +  +H +SF   D+     
Sbjct: 175 SDYPIIGSGSLNFPHTGNN--------GVYADIVLGKDTLRLYSLHFESFHIDDTQITQE 226

Query: 178 SPS------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           +            + Q   ++ +      S  P ++ GDFN            ++ I   
Sbjct: 227 NSKKILLSLPKRFAIQQSQVELFDAHADTSPYPIIVCGDFNNTAFSY-----LYQKIQNR 281

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +  F +E                IDY   D           F    +      +    
Sbjct: 282 GLIDSFQEEGSGFGKTYYFPYFPFRIDYIFADP---------YFKITSHKVYTGINY--- 329

Query: 292 LSDHCPISIDY 302
            SDH P+   +
Sbjct: 330 -SDHYPLKATF 339


>gi|229162671|ref|ZP_04290628.1| Exodeoxyribonuclease [Bacillus cereus R309803]
 gi|228620553|gb|EEK77422.1| Exodeoxyribonuclease [Bacillus cereus R309803]
          Length = 252

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 84/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +  +ADI  LQE+   +    +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCLQEIKLQDGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +   ++ ++  +        +             + L        +   
Sbjct: 92  -----VITLEFEDFHMITLYTPNSKRGLERLDYRMKWEDDFRAYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  +     +  +      +  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCVLEEGFIDTYRYLYPDQKGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKNQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHVNF 252


>gi|297190955|ref|ZP_06908353.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721867|gb|EDY65775.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486]
          Length = 259

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 81/304 (26%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ LQE          
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCLQETKCTEE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  R + +    + +     +AV  +          L GA D       R
Sbjct: 41  ------QFPAAQLRELGYESAVNASGRWNGVAVISRVGLDDVVRG-LPGAPDYEGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +      Y        +  + L   +T    +  
Sbjct: 94  A-----ISATCGPVRVWSVYVPNGREVAHDHYGYK------LRWLEALSVAVTDDAAAGR 142

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GDFN                            + +         P+      +  
Sbjct: 143 PFAVLGDFNIAPTDDDVWDPSFFDGMTHVTPPERAALEALRKRGLADVVPRPLKYE-HPF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    ++     +            D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNEPFTAAVKDSFV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|156086334|ref|XP_001610576.1| endonuclease/exonuclease/phosphatase family protein [Babesia bovis
           T2Bo]
 gi|154797829|gb|EDO07008.1| endonuclease/exonuclease/phosphatase family protein [Babesia bovis]
          Length = 319

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 99/324 (30%), Gaps = 54/324 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q V+++S+N+  L          +      +++  +    +  D DI+ LQE+ SY+   
Sbjct: 5   QPVKILSYNVQGLPSLLLPIADLDIRMDHIANF--ISSLFQKYDVDIMVLQEVFSYSLYN 62

Query: 82  KVFPKNTWCIFYSTERLINHSKR----------DSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           K+          +       S             + + I + I +  ++  V ++   L 
Sbjct: 63  KIKDALRGIAEDTGIISRPVSNSVLMSCLDTLLSTFSFITSGIVIFSRHPIVYKERL-LF 121

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               +  R   + AV   + +NG  + V+  HL+S    D        +  + ++Q   L
Sbjct: 122 SNGFNAERYAGKGAVAARISVNGNLLDVIGTHLQSDEGED--------AQEIRNKQLIEL 173

Query: 192 KDWITQKKESLV------------PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
            +WI                    P V+AGD N  ++              +     F  
Sbjct: 174 AEWIGINPLEDERAIAERDSLPYVPMVLAGDLNCSLDSETERFSDVVAALNDKLEDTFGY 233

Query: 240 EKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSE-----------I 278
            +     +                    DY + +  +     Q    +            
Sbjct: 234 NQPEPTYSTLTNDFCAFQNNPNVFNHVYDYILKNHESTLLEAQRVIKDKLETAFVLPVCD 293

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
             ++D +      +SDH PI    
Sbjct: 294 EDDDDCVDPEMYNVSDHYPIIATI 317


>gi|146308751|ref|YP_001189216.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
 gi|145576952|gb|ABP86484.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
          Length = 362

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 91/325 (28%), Gaps = 68/325 (20%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WN+  L+                  + S     +    + +  ++   D+V 
Sbjct: 51  GQALKVMTWNVQYLAGKRHVFWYDLPGGDGPDERPSSDDLAATLDEVVRVLRDEQPDLVL 110

Query: 71  LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LQE+                   +A ++P ++   ++     + H +   +  +      
Sbjct: 111 LQELHDGAKASDYQDQLALLQERLADLYPCSSQAFYWKA-AFVPHPRILGSVGMKLGTLS 169

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
           R +  R  +   P + +     +   +RA+ +       G ++  ++ H  +F   D   
Sbjct: 170 RFQIARAERLQLPEIPSDPLSRQFQLKRALLVSHLPIRGGGELVAINTHFDAFAQGDDTM 229

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTI 228
                       Q Q     + Q +    P+++ GD N                 +    
Sbjct: 230 RR----------QVQMTDALLQQLQAGASPWILGGDLNLLPPGQFQHLPENQRGWYAADS 279

Query: 229 DPNDSLIRFP--------KEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQES 274
           +  D   R+P                      +         +DY               
Sbjct: 280 ELQDLAGRYPMIPSLQQASGAQQAQWYTHYPNDPAASGPDRTLDYLFYSPRL-------- 331

Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299
                +     +     +SDH P+ 
Sbjct: 332 ---TPFASQVRQHDTLGISDHLPVI 353


>gi|260910504|ref|ZP_05917172.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260635346|gb|EEX53368.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 298

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 85/291 (29%), Gaps = 44/291 (15%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
           A     VR++++N            +      +        Q  K L+ D+V +QE+ S 
Sbjct: 48  AKAEGNVRIMTYNCFYCKSNTASKTF------SAEHTAAFAQVIKALNPDVVVIQELDSG 101

Query: 77  --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               A   +            +     +   S   I   +  ++       +   L G  
Sbjct: 102 TTERAKRYLLDDIRRATGLDYDLFFASAAPYSEGKIGPGVLFKRTMQPTSIKKIELPG-- 159

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R    L       +  +L  HL      D        S  +++ +       
Sbjct: 160 -----KETRALAVLTFP----RFTLLGTHL------DLDVTARKTSAEIVNHELTTFA-- 202

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                   +P   AGD N   ++      F         +I    +  +  +     +  
Sbjct: 203 -------TLPVFFAGDLNDSPSWNPEKSAF--------PIINKAFDVITPQSGTSVDQPN 247

Query: 255 IPIDYFVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             ID+ ++D+     + + ++        +   +  + +SDH P+ +D  F
Sbjct: 248 ETIDHVLIDKAHKGAVKVVQTAVVKQLEINGKVTETQTISDHFPVFVDVRF 298


>gi|325106309|ref|YP_004275963.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
 gi|324975157|gb|ADY54141.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
          Length = 287

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 85/303 (28%), Gaps = 31/303 (10%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +L L  F     A  AQ + + S+N+             +     ++  +++    K  +
Sbjct: 8   ILTLTLFSFSALAVQAQ-LVVGSYNLRL------DIPKVDVGNEWSNRVSMISDIIKFYE 60

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            DI+  QE  ++           +  +        ++   S             +     
Sbjct: 61  FDILGTQEGFAHQLEDLKKVLPNYGEYGVGRDDGKNTGEQSAIFYRKDKFDLLDSGSFWL 120

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
              P   +    ++   R    +L++    K  +   +                S  L+ 
Sbjct: 121 SETPEKPSFGWDAQKYRRVCSWILLKDKKTKKKLYCYNAHY---DHQANIARKESSKLIL 177

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           ++ + ++           P ++ GDFN   +     +     +  +       K + +  
Sbjct: 178 EKIKNMRK--------GTPVILTGDFNGNPSTEWYKEIAQSNVLFDTYSQTPIKLEGNPT 229

Query: 246 NANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     +    ID+    ++         F    +        GK  SDH P+   
Sbjct: 230 YQEYGNAELLKGNDVIDHIFTTKD---------FKVKKWGILSNTFHGKYPSDHFPVITF 280

Query: 302 YDF 304
            ++
Sbjct: 281 LEW 283


>gi|291515793|emb|CBK65003.1| Predicted extracellular nuclease [Alistipes shahii WAL 8301]
          Length = 344

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/348 (10%), Positives = 82/348 (23%), Gaps = 56/348 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQ-------EGVSLWKNSVKRTTS- 52
           M R ++  L   L+       +  ++V +N   L +        +     +   K  ++ 
Sbjct: 1   MKRIFLTGLFASLIAVACFAQKPYKVVFYNFENLFDTIHDPGVLDEEFTPEGPKKWNSAK 60

Query: 53  ------DYTLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
                 +   +       D D   ++ + E+ + + +  V  +            I H  
Sbjct: 61  YTRKIGNLERVLFDIAAEDKDYPVVIGVSEIENRSVMEDVIAQPK---LAPGNYRIVHYD 117

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                 +  A   R    ++   +               R  V +   I+ +  + L  H
Sbjct: 118 SPDARGVDVAFYYRPDVFKLEGSAAIPFKMP-ELPNFRTRDFVTMWGTIDSEPFFFLVSH 176

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
             S             + +    Q + + D +          V+ GD N         + 
Sbjct: 177 WPSRLGGKEASAPKRLAAAK---QVKHIVDSV-TAANPATKVVVMGDLNDDATDDSIVEG 232

Query: 224 FW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE----- 273
                  K +   D    F     +              D  ++ +N             
Sbjct: 233 LNAKGKIKEVGKGDMFNPFIGLLKAGYGTLAYRDEWNLFDNIIVSENLATGSTGSLKIQP 292

Query: 274 ---------------------SFSEILYNEDDIKSRGKRLSDHCPISI 300
                                 +                 SDH P+ I
Sbjct: 293 AGNSKFYGGIFRRPYMIQKEGQYKGYPLRTFVGNDFQGGFSDHFPVYI 340


>gi|260172872|ref|ZP_05759284.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2]
 gi|315921155|ref|ZP_07917395.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D2]
 gi|313695030|gb|EFS31865.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D2]
          Length = 264

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 81/311 (26%), Gaps = 59/311 (18%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ---------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M  +  + L       +  +AQ          V+ +++N  +  +Q              
Sbjct: 1   MNFRICILLFLVCCLLSPVMAQRDKNKQKEVTVKAMTYNTYSGRKQG------------- 47

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                + +  K  D DIV LQE+     +          +    +        D      
Sbjct: 48  --IDKIAEVIKLEDPDIVSLQEIERNTEINPWDTPERLSVLTGMKYYYFAHALDIPTGGD 105

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
               +  K     ++S+ L   K++      R    + V   GK+ +    HL       
Sbjct: 106 YGNVILSKFPISEEKSFKLSVLKENDY---VRSFGYVKVMKEGKEFYFATTHLDHEYEDA 162

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           +                + + + +   ++   P ++ GD N +         F K    N
Sbjct: 163 AR--------------LKQIDEILACMEQLDKPIILGGDLNSRRGSATM-AVFQKYFTVN 207

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                 P                              +LI            ++     +
Sbjct: 208 CLSDAAPWTVPVPSPTYT-----------------CDWLIYAPNEAFTVKAYNVCYWADK 250

Query: 292 LSDHCPISIDY 302
            SDH P+   Y
Sbjct: 251 ESDHYPVVATY 261


>gi|254471153|ref|ZP_05084555.1| 5'-nucleotidase [Pseudovibrio sp. JE062]
 gi|211959299|gb|EEA94497.1| 5'-nucleotidase [Pseudovibrio sp. JE062]
          Length = 1553

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/373 (12%), Positives = 96/373 (25%), Gaps = 91/373 (24%)

Query: 17   TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
             A V  ++++ S+N+       G     ++          + +   ++DAD+  LQE+ +
Sbjct: 1177 PADVGGELKVSSFNVLNYFTTLGQRGA-STEADLARQTDKIVKAMLDIDADVFGLQELEN 1235

Query: 77   Y------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
                         +A+              T           ++ I T +  R   + V+
Sbjct: 1236 NGFDDASAISALVDALNAELTAQGRTDELYTFVNPTDGAPIGSDAITTGMIYRPSKLTVI 1295

Query: 125  QQSYP-------------------LLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHL 164
            +                                   NR  V    E  NG++  +   H 
Sbjct: 1296 ETETYTYQETSAATTYAIADRLQEFADRSYVGDFQRNRPTVATTFEDANGERFTLAVNHY 1355

Query: 165  KSFCFLD--------------------------------------SLENTYSPSCSLLSQ 186
            KS                                              +  +        
Sbjct: 1356 KSKGPSGLSDLVEDIQGKLDAGTIPAADVAQVQADLDALIADPNYDQGDGQAFWAQARED 1415

Query: 187  QAQWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             A+ L +W+  +          ++ GD N         D   + I+  D      +    
Sbjct: 1416 AAKELHEWLRTEYAGAGLDPDILVIGDLNTYGK----GDSVQELIEGGDMTDLLSQYLGD 1471

Query: 244  RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------------ 291
               +      +  +D+ +   +  + +   +   I  +E D+ S   R            
Sbjct: 1472 EAYSFVFDGQRGSLDHALASDSLAEQVTGLAEWHINADEPDLLSYNSRFTDAGFYNDDQY 1531

Query: 292  -LSDHCPISIDYD 303
              SDH P+ I  D
Sbjct: 1532 GASDHDPLIIGLD 1544


>gi|190576404|ref|YP_001974249.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
 gi|190014326|emb|CAQ47973.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
          Length = 255

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 87/304 (28%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N+L+                     L Q+ ++   DIV +QE          
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLEQWLRDFGPDIVGIQET--------- 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S      +    ++   +  +A+  +          + G +D   R    
Sbjct: 36  -KLEDHKFPDSALIAAGYRSVFASQKTYNGVALLSREP-AQDVQIGIPGFEDEQKR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++      + V+++++ +   + + +  Y        +  Q +  WI Q+ +   
Sbjct: 90  -----VIAGTFGDLRVINLYVVNGQDVGTDKYEYK------LRWLQAVHAWIAQELQRHP 138

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GDFN   +    +D                   + +        F +  +     
Sbjct: 139 KLIVMGDFNIAPDARDVHDPEVWNENHILTSTAERGALQKLLQLGLHDGF-RLHNDEAGV 197

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID  ++        +           D      +R SDH P 
Sbjct: 198 FSWWDYRAAGFRRNLGLRIDLTLVSDALKAGAVASGI-------DREPRTWERPSDHAPA 250

Query: 299 SIDY 302
            ++ 
Sbjct: 251 WVEI 254


>gi|327188747|gb|EGE55945.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512]
          Length = 263

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 82/303 (27%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ K    D+V LQE+ + +A    
Sbjct: 1   MKIATYNVNGING----------------RLDILLRWLKEDAPDVVCLQELKTDDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  K    +     L G  D        
Sbjct: 41  ------KFPRKETERAGYGAVWHGQRSWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV+ ++        +  ++L +     S +  Y        +  + L  +  +  E  V
Sbjct: 95  AAVDGVL--------IGSLYLPNGNPFPSAKFEYK------LRWFRRLSAYAAELLEIEV 140

Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P ++AGDFN                  +   +                 +          
Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKAYAQLVAQGWTDAVRHLHPGERIYT 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +             ID+ ++      +L                   +  SDH P+ I
Sbjct: 201 FWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSARVR-------RKPRGWEHTSDHAPVMI 253

Query: 301 DYD 303
           + D
Sbjct: 254 ELD 256


>gi|316935446|ref|YP_004110428.1| 5'-nucleotidase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315603160|gb|ADU45695.1| 5'-Nucleotidase domain protein [Rhodopseudomonas palustris DX-1]
          Length = 2775

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 92/350 (26%), Gaps = 67/350 (19%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +P    V  ++++ S+N+                      ++          L      +
Sbjct: 623 IPAPEDVNGRLKVASFNVLNYFATLDNGGATAIGAAPRGADNAAEFARQTEKLVGTILEM 682

Query: 65  DADIVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAV 116
           + D++ L E+ +        NA+  +  +            ++  ++    D I      
Sbjct: 683 NVDVLALTELENDFSASSSGNAIKYLVDRLNAQAGAGVYAWVDPGQQFVGGDAIAVGFIY 742

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAG-------------------NRRAVELLVE--INGK 155
           +  +V++   +             G                   +R A+ +  E    G+
Sbjct: 743 KTTSVKIADGTTVETLGDADLPGLGLGGLTAQSTVGAVFDGENTSRNALAVTFEELSTGE 802

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCS-LLSQQAQWLKDWI------TQKKESLVPFVIA 208
               +  HLKS     +  +            Q +     +           +    ++ 
Sbjct: 803 TFTAIANHLKSKSGTGTGVDADQGDGQGNWRNQRELAATALTAWAASDPTGSNDPDVMLL 862

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GDFN             K I+         +E      +         +DY   + +   
Sbjct: 863 GDFNGYAKEQST-----KIIETAGFENLHSREN--GAYSYVFDGQTGTLDYAFTNGSLGS 915

Query: 269 FLIQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303
            +   +   I  +E D                     R+SDH P+ +  D
Sbjct: 916 QVSGVTTWHINADEADALDYNTDYGRDTSIFDGSAPTRVSDHDPVVVGLD 965


>gi|253582729|ref|ZP_04859949.1| exodeoxyribonuclease III [Fusobacterium varium ATCC 27725]
 gi|251835305|gb|EES63846.1| exodeoxyribonuclease III [Fusobacterium varium ATCC 27725]
          Length = 253

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 74/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y KN +ADI  +QE          
Sbjct: 1   MKLISWNVNGLRAAVQKGF---------------LDYFKNENADIFCIQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LDLEGYHQYWNYAEKKGY----------SGTAIFTKKKPIEVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     +  +               L            
Sbjct: 91  -----VITLEYEDFYMITVYTPNSQEELARLDYRMSWEDEFRNYVMKLDKL--------K 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD N                           +  +  N  +  F         A 
Sbjct: 138 PVIICGDLNVAHKEIDLKNPKSNRKNAGFSDEERAKFTELLENGFIDSFRHFYPEVTGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     +        +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSERLKDIMEGAEIHNEIL-----------GSDHCPVV 246

Query: 300 IDY 302
           +  
Sbjct: 247 LKL 249


>gi|255540403|ref|XP_002511266.1| ap endonuclease, putative [Ricinus communis]
 gi|223550381|gb|EEF51868.1| ap endonuclease, putative [Ricinus communis]
          Length = 326

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 103/307 (33%), Gaps = 44/307 (14%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +  Q ++ ++WN N+L            + R  +D+    ++   LD D++ +QE+ 
Sbjct: 34  NNTTNKQPLKFITWNANSL------------LLRAKNDWPEFTKFVSTLDPDVIAIQEVR 81

Query: 76  SYNAVAKVFPKNTWCI----------------FYSTERLINHSKRDS---NNDIHTAIAV 116
              A +K  PKN   +                  S+    ++    S   +    TA+ V
Sbjct: 82  MPAAGSKGAPKNPGELKDDTSSSREEKQILMRALSSPPFGSYKIWWSLADSKYAGTALLV 141

Query: 117 RKKNVRVLQQSYPLLGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +K+   +           DSF  +  ++R +E +V+++ K +        S         
Sbjct: 142 KKRFHNIKVSFSLDKSGGDSFREKKMDKRMLEFVVQLSDKPLIWCGDLNVS-------HE 194

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               S       A+        K++   P     +  R  + L            +    
Sbjct: 195 EIDVSHPEFFIAAKQNGYVPPNKEDCGQPGFTLNERKRFGSILREGKLIDAYRFLHKEKD 254

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                  S     K    ++ IDYF++ +     +I             I+ +G   SDH
Sbjct: 255 MERGFSWSGNPIGKYRGKRMRIDYFIVSEKLKGRIISCEMH-----GQGIELQGFYGSDH 309

Query: 296 CPISIDY 302
           CP+S++ 
Sbjct: 310 CPVSLEL 316


>gi|167771017|ref|ZP_02443070.1| hypothetical protein ANACOL_02371 [Anaerotruncus colihominis DSM
           17241]
 gi|167666687|gb|EDS10817.1| hypothetical protein ANACOL_02371 [Anaerotruncus colihominis DSM
           17241]
          Length = 250

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 77/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L    G                    +    DAD V LQE   +   A +
Sbjct: 1   MKLVSWNVNGLRACLGKGF---------------LDFFSAADADAVCLQETKMHQEQADL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   + S E              ++  AV  +   +       +   DS  R    
Sbjct: 46  ELPGYQQFWNSAE-----------KKGYSGTAVFTRVPPLNVTYGIGMAEHDSEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  ++++ +  +                   +     + ++    ++  
Sbjct: 91  -----VITVEYEPFYLVNCYTPN-------AQRELARLEYRMKWEDDFRAYLMS-LDAKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                              +     +  F         A 
Sbjct: 138 PVVLCGDLNVAHQEIDLKNPKTNRRNAGFSDEERAKMTELLAGGFVDTFRALYPDVTGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     +                      SDHCP+ 
Sbjct: 198 TWWSYLRRARDTNAGWRIDYFIVSERLRGAVHDSRIR-----------ADVMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|256827574|ref|YP_003151533.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641]
 gi|256583717|gb|ACU94851.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641]
          Length = 262

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 75/304 (24%), Gaps = 67/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RLVSWN+N L   E                        +L AD+  LQE          
Sbjct: 1   MRLVSWNVNGLRAAEKKGF---------------SDIFTSLKADVFALQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +   +S      +S             +    V  L     +   +         
Sbjct: 45  LEFPDYESHWSYAERKGYSGTAVYARQKPLQVLHGLGVPHLDTEGRICALEFPEFWF--- 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                        + V   + ++          +  +     +  +     +        
Sbjct: 102 -------------VDVYTPNAQNELARIDHRMEWDDAFRDFCKGLEKGTTPLGPDTAQPK 148

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GDFN                         + +  +     +  F     +   A 
Sbjct: 149 PVIMCGDFNVAHEEIDLKNPKSNRGNAGFSDEEREKFTKLLDAGFVDTFRLLNPTEVGAY 208

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++    +        L+            SDHCP+S
Sbjct: 209 SWWSYRFNARANNAGWRIDYFLVSKSLADRVRAARIHADLF-----------GSDHCPVS 257

Query: 300 IDYD 303
           +D D
Sbjct: 258 LDID 261


>gi|182438103|ref|YP_001825822.1| putative exodeoxyribonuclease [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178466619|dbj|BAG21139.1| putative exodeoxyribonuclease [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 271

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 74/305 (24%), Gaps = 61/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + S N+N L                        ++    DAD+V LQE+ +  A    
Sbjct: 2   LTVTSVNVNGLRAAAKKGF---------------VEWLAGTDADVVCLQEVRAELA---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            H+          A           +      G     +   + 
Sbjct: 43  -----QLPEGVGAPEGWHTVHAPAAAKGRAGVSLYSRQAPERTQIGFGGFGVPGAEEFDA 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +++ G  + V  ++L S       ++      +      Q LK           
Sbjct: 98  SGRYAEIDLPG--VTVASLYLPSGEVGTERQDEKERFMAAFLPYLQGLKARA---AADGR 152

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+ GD+N                             + ++    +             
Sbjct: 153 EVVVCGDWNIAHREADLKNWKANRKSSGFLPEERAWLTRVLEEAAYVDVVRALHPDVEGP 212

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY +         ++          +   + G+R SDH P+
Sbjct: 213 YSWWSYRGRAFDNDSGWRIDYQMATPGLAGRAVKAWV-------ERAATHGERWSDHAPV 265

Query: 299 SIDYD 303
           ++ Y+
Sbjct: 266 TVVYE 270


>gi|166030570|ref|ZP_02233399.1| hypothetical protein DORFOR_00233 [Dorea formicigenerans ATCC
           27755]
 gi|166029572|gb|EDR48329.1| hypothetical protein DORFOR_00233 [Dorea formicigenerans ATCC
           27755]
          Length = 250

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 77/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +    G                    + +  DADI  +QE          
Sbjct: 1   MKFISWNVNGIRACAGKGFM---------------DFFQETDADIFCIQETKMQEG-QLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D   R    
Sbjct: 45  LDTPGYHQYWN----------YAKKKGYSGTAIFTKQEPISVSYGLGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  + + ++  +     +  +             + L++          
Sbjct: 91  -----VITLEFEDFYFITVYTPNSQSELARLDYRMKWEEDFLTYLKKLEE--------TK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  +     +  F      +    
Sbjct: 138 PVIFCGDLNVAHTEIDLKNPKTNRKNAGFTDEERQKFTELLNAGFVDTFRYFYPEQTGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + ++    L           ED         SDHCP+ 
Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSESLKDRL-----------EDAKILTDIMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDI 249


>gi|114321996|ref|YP_743679.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114228390|gb|ABI58189.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 276

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 90/290 (31%), Gaps = 54/290 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQE 73
            +++R++S+NI +  E      +     +          +   +         D+V LQE
Sbjct: 25  PRQLRVMSYNIQSGLETRRYHHYVTRGWQHFWPSSSREGNLDRMGHML--HQYDLVGLQE 82

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + + +       +  +     T     +       + +     +  N  + +     +  
Sbjct: 83  VDAGSFRTGYVNQVEYLARRGTFPYWYYQ-----TNRNLGRLAQHSNGLLTRYRPASIDE 137

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                R   R A+ L     G+ + V+ +HL               S    + Q  +L D
Sbjct: 138 HALPGRVPGRGALHLRFGGAGEALNVIIVHLAL-------------SRRARATQLAYLAD 184

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            I +        ++ GDFN            + T+     L+    +     +   + + 
Sbjct: 185 LINEH----RHVIVMGDFNCHSRSPE-----FTTLVDRTELLEPVHDL----HTFPSWKP 231

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  ID+ ++  +     +              +     LSDH PI++D  
Sbjct: 232 QRNIDHILLSSSLEVGHV--------------RVLDYPLSDHLPITMDIS 267


>gi|226304979|ref|YP_002764937.1| exodeoxyribonuclease III [Rhodococcus erythropolis PR4]
 gi|226184094|dbj|BAH32198.1| putative exodeoxyribonuclease III [Rhodococcus erythropolis PR4]
          Length = 266

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 70/307 (22%), Gaps = 70/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +    D D++ +QE    +     
Sbjct: 1   MRIATWNVN----------------SVRARTDRIIDWLGRSDVDVLAMQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSRAG 141
                    Y   + I +            +A+  +     V        G         
Sbjct: 41  ------QFPYERFKEIGYEVAHVGLSQWNGVAIASRVGLDDVQIGFEDQPGFDKDPEADP 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--K 199
            R A  +     G  + V  +++ +   L+     Y             L+D       +
Sbjct: 95  VREARAIGATCGG--VRVWSLYVPNGRELEDPHYAYKLD------WLAKLRDDAEGWLKQ 146

Query: 200 ESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSR 244
           +      + GD+N                           +     +             
Sbjct: 147 DPDAQIALVGDWNVAPTDDDVWDPAFFEGKTHTSEPERAAFTAFTESGFADVVRPYTPGP 206

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                ID+ +        +            D  + +GK  SDH
Sbjct: 207 -GVYTYWDYTQLRFPKKQGMRIDFILGSPAFAARVEAAEI-------DRNERKGKGASDH 258

Query: 296 CPISIDY 302
            P+ +  
Sbjct: 259 APVIVKL 265


>gi|261341374|ref|ZP_05969232.1| endonuclease/exonuclease/phosphatase family protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316685|gb|EFC55623.1| endonuclease/exonuclease/phosphatase family protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 253

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 74/286 (25%), Gaps = 49/286 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SLKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P      F +     +++        + H   AV  +                S
Sbjct: 59  MHVENWPDTPHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              +  R  +   +        +    +                 +    Q Q L +W  
Sbjct: 114 VGESEKRGLLYCRIAPPDLTFPIHVGCVHLGLR-----------EAHRQAQLQMLAEWTN 162

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P V+AGDFN       +       ++       F +               + 
Sbjct: 163 A-LPEGEPVVVAGDFNDWRQRANHPLKAEAGLEE-----IFTRAHGRPARTFPVRFPLLR 216

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +                           + LSDH P+S + 
Sbjct: 217 LDRIYVKNAHASS-----------PTALALLNWRHLSDHAPLSAEI 251


>gi|189467767|ref|ZP_03016552.1| hypothetical protein BACINT_04159 [Bacteroides intestinalis DSM
           17393]
 gi|189436031|gb|EDV05016.1| hypothetical protein BACINT_04159 [Bacteroides intestinalis DSM
           17393]
          Length = 335

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/341 (9%), Positives = 87/341 (25%), Gaps = 57/341 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46
           M +   L  ++  V    +   +     +  +N+  L +    +   +           +
Sbjct: 1   MKKLLFLISLWLCVTTADAQQNERDLYSVAFYNLENLFDTIHDAGKNDLEFLPSGSYVWT 60

Query: 47  VKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
            ++  +    L +    +  D       ++ + E  +   +  +  +     +       
Sbjct: 61  AEKYEAKLKNLAKVLSEVSRDRVPGGPAVIGVAEAENNRVLTDLVSQPAISNYKFVHYEG 120

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
              +      I  A+    +   V      L    +  +    R  + +  ++ G+++  
Sbjct: 121 PDKR-----GIDCALLYDPEQFTVTNSKLVLSTPFEGDTVHLTRGFLIVDGQMAGERVCF 175

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S           SP     ++Q + L D + +  +  +  ++ GD N       
Sbjct: 176 IVNHWPSR-------GAKSPVRVHAAKQVRALADSLMRT-DKKLKLIVMGDMNDDPMDES 227

Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------ 268
                      +          +   +D               D  V+ +   K      
Sbjct: 228 MVTLGARKYAKQVKKGEFYNPWWETLEDKGVGTLLYRGKWNLFDQIVVSRPLLKAKKGLK 287

Query: 269 ------------FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                       F     +          +      SDH P
Sbjct: 288 YDHNEVFIREYLFQQDGKYKGSPLRTHGGRVWLNGYSDHLP 328


>gi|326778748|ref|ZP_08238013.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1]
 gi|326659081|gb|EGE43927.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1]
          Length = 271

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 77/307 (25%), Gaps = 65/307 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           + + S N+N L                        ++    DAD+V LQE+ +       
Sbjct: 2   LTVTSVNVNGLRAAAKKGF---------------VEWLAGTDADVVCLQEVRAELAQLPE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     W   ++       +     +                +      G     +   
Sbjct: 47  EVGAPEGWHTVHAPAAAKGRAGVSLYSRQAP-----------ERTQIGFGGFGVPGAEEF 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +       +++ G  + V  ++L S       ++      +      Q LK         
Sbjct: 96  DASGRYAEIDLPG--VTVASLYLPSGEVGTERQDEKERFMAAFLPYLQGLKARA---AAD 150

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               V+ GD+N                             + ++    +           
Sbjct: 151 GREVVVCGDWNIAHREADLKNWKANRKSSGFLPEERAWLTRVLEEAAYVDVVRALHPDVE 210

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY +         ++          +   + G+R SDH 
Sbjct: 211 GPYSWWSYRGRAFDNDSGWRIDYQMATPGLAGRAVKAWV-------ERAATHGERWSDHA 263

Query: 297 PISIDYD 303
           P+++ Y+
Sbjct: 264 PVTVVYE 270


>gi|226469330|emb|CAX70144.1| Nocturnin [Schistosoma japonicum]
          Length = 339

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 82/307 (26%), Gaps = 26/307 (8%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           K+R++ WNI        +        +        L+ +     D DIV LQE      +
Sbjct: 28  KIRIMQWNILAQGFIPLDEFVHCPCKMLSFERRCRLIAEEIFRYDPDIVCLQEADIIKDI 87

Query: 81  AKVF----PKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            ++      K+ +  ++  +        ++++     A+  R    ++++     L   D
Sbjct: 88  VEILTTRRGKDDYSFYFLPKYNSPCLMIKNNHGPDGLAVIYRNDKYKLIKTEKIPLNEDD 147

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S          + +   N     +  I L         E        L++  + +++   
Sbjct: 148 SRHALFCHFVPKAVGSSNKSFSDIYLICLHLKAKETYREIRKKQGQKLINYLSSFIERIC 207

Query: 196 TQKKESL----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-----FPKEKDSRCN 246
           +           P  I GDFN        N     + + N            +       
Sbjct: 208 STGLSVNSNVFPPIFICGDFNADPTEPVINLLQNFSFNSNTLYKLTSAYYVAEGCKEPEF 267

Query: 247 ANKNLRNKIPI----------DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
               +R    I          DY          L   S                  SDH 
Sbjct: 268 TTWKIRKSKRITNLTEICHTVDYIWYCNQLCTLLGVWSIPSKREIGPSGLPSAIFPSDHM 327

Query: 297 PISIDYD 303
            +  D+ 
Sbjct: 328 NLIADFS 334


>gi|222150120|ref|YP_002551077.1| exodeoxyribonuclease III [Agrobacterium vitis S4]
 gi|221737102|gb|ACM38065.1| exodeoxyribonuclease III [Agrobacterium vitis S4]
          Length = 267

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 77/306 (25%), Gaps = 68/306 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       ++  + K    DI+ LQE+   N    
Sbjct: 2   TFSLTTWNIN----------------SVRLRMPIVEHFLKLRQPDILCLQEIKCQN---- 41

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      + + L            +  +A   K            G  DS      
Sbjct: 42  -----HEFPLEAFQALGYPYAILHGQKGYHGVATVSKFPLTEDHRQDFCGVGDSRH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +  + E NG++I + + ++ +    D      +P         + +K  ++   E  
Sbjct: 93  ---ISAIFEWNGRRIRLHNFYVPAG--GDEPNRDINPKFGHKLDFVEEMKA-LSASAEPN 146

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GD N                   +           I+    +    +  D    
Sbjct: 147 TSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETAGLLDVINRGGWVDLMRQLVDPSQK 206

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+     +    L                   ++ SDH 
Sbjct: 207 LYTWWSYRAKDWDSADKGRRLDHIWSSPDLLPSLK-------TIEILREARGWEKPSDHV 259

Query: 297 PISIDY 302
           P+++ +
Sbjct: 260 PVTVQF 265


>gi|254414082|ref|ZP_05027850.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196179218|gb|EDX74214.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 316

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 89/286 (31%), Gaps = 39/286 (13%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            + A ++++ S+N+ +      V   K+                   D DI    E+ + 
Sbjct: 30  PAHASQLKVASFNVESGDAVPSVIARKHIGP--------------LEDIDIWGFSEVQNE 75

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           + +  +                      +      AIA       + +  +  L   +  
Sbjct: 76  SWLLDLEQGTE----DGENADFKTILGSTGRGDRLAIAYNSNL--LEEVKHYELDDINIG 129

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R       +   +  G++   +  HL            Y  S S   +QAQ L +W   
Sbjct: 130 GRVRAPLVAQFRFKPTGEEFLFVVNHL------------YRSSESSRHEQAQLLNEWGRS 177

Query: 198 KKESLVPFVIAGDFNRKIN-YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           ++   +P + AGD+N   +   G +D+ W  +  +D       +K        + R    
Sbjct: 178 QE---LPIIAAGDYNFDWDVVSGVHDEGWDFLTADDVFTWVKPDKLVAT--LCSDRYDSV 232

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D+  +   A  +    S        D      K  SDH PI   +
Sbjct: 233 LDFVFVAGEAKNW-SASSVILYSEPSDAYCPDDKTTSDHRPILATF 277


>gi|160885982|ref|ZP_02066985.1| hypothetical protein BACOVA_03988 [Bacteroides ovatus ATCC 8483]
 gi|156108795|gb|EDO10540.1| hypothetical protein BACOVA_03988 [Bacteroides ovatus ATCC 8483]
          Length = 366

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 79/290 (27%), Gaps = 50/290 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++N++  + +                   +  Y +NL ADI+  QE      +   
Sbjct: 110 LTVATYNVDAFNHEHTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154

Query: 84  FPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           F  ++     S           +  + +  A+  R          YP       +     
Sbjct: 155 FGVDSIAAVLSDWPYYYIPISPEGKHLLQLAVFSRYPIKEENLIVYPDSKNCSLWCDIET 214

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY------------SPSCSLLSQQAQW 190
                 L   + +   V     K    L + ++                +    + QA  
Sbjct: 215 NARTIRLFNNHLQTTEVSQNKRKLEKGLHTDDSQRVERAALGLIDGLHENFRKRAVQANT 274

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           LK  I     S  P +I GDFN   +    +      +        F           K 
Sbjct: 275 LKQLI---AASPYPTIICGDFNSLPSSYVYHTVKGDKLQDG-----FQTSGHGYMYTFKF 326

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            ++ + IDY +                   N  D  S     SDH P+ +
Sbjct: 327 FKHLLRIDYILHSPEL--------------NSTDYFSPDLTYSDHNPVVM 362


>gi|299133181|ref|ZP_07026376.1| exodeoxyribonuclease III Xth [Afipia sp. 1NLS2]
 gi|298593318|gb|EFI53518.1| exodeoxyribonuclease III Xth [Afipia sp. 1NLS2]
          Length = 271

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 73/307 (23%), Gaps = 64/307 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       L+ ++ K+   D++ LQE      +  
Sbjct: 2   PFTLTTWNIN----------------SVRLRIDLVAKFLKSRRPDVLCLQE---TKCIDD 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP   +       RL       +    +  +A+  K   V +      G  D      +
Sbjct: 43  AFPLKRFQ------RLGYEHIALNGQKGYHGVAIVSKRPFVSKDVRTFCGKID------S 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R       E  G    ++  +       D  +   +P           ++D      +  
Sbjct: 91  RHISVAFGESAGLSAPLVLHNFYVPAGGDIPDPAANPKFEHKLSFLDEMRDCAPLHPQGD 150

Query: 203 VPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GD N   +                               + +    +       
Sbjct: 151 ARHILVGDLNVAPHEHDVWSHKQLLNVVSHTPVECEKLLAVQSQGNWVDIARQRIPMDEK 210

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+  +                 +         +R SDH 
Sbjct: 211 VYTWWSYRAADWTVGNRGRRLDHIWVSPALGDK-------VSDFRITRDARSWERPSDHV 263

Query: 297 PISIDYD 303
           P++   D
Sbjct: 264 PVTAVLD 270


>gi|215409940|ref|ZP_03418748.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis 94_M4241A]
 gi|298523903|ref|ZP_07011312.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis
           94_M4241A]
 gi|298493697|gb|EFI28991.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis
           94_M4241A]
          Length = 273

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 66/305 (21%), Gaps = 66/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  +    D D++ +QE    +     
Sbjct: 6   LRLATWNVN----------------SIRTRLDRVLDWLGRADVDVLAMQETKCPDG---- 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       D    +A+  +      +         S       
Sbjct: 46  ------QFPALPLFELGYDVAHVGFDQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAA 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
                 +      I V  +++ +   LD    TY             L+D          
Sbjct: 100 TTEARALGATCGGIRVWSLYVPNGRALDDPHYTYKLD------WLAALRDTAEGWLRDDP 153

Query: 203 -VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P  + GD+N                           +  I                  
Sbjct: 154 AAPIALMGDWNIAPTDDDVWSTEFFAGCTHVSEPERKAFNAIVDAQFTDVVRPFTPGP-G 212

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +                +       + +GK  SDH P
Sbjct: 213 VYTYWDYTQLRFPKKQGMRIDFILGSPALA-------ARVMDAQIVREERKGKAPSDHAP 265

Query: 298 ISIDY 302
           + +D 
Sbjct: 266 VLVDL 270


>gi|148560443|ref|YP_001259818.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840]
 gi|225628198|ref|ZP_03786233.1| exodeoxyribonuclease III [Brucella ceti str. Cudo]
 gi|148371700|gb|ABQ61679.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840]
 gi|225617023|gb|EEH14070.1| exodeoxyribonuclease III [Brucella ceti str. Cudo]
          Length = 289

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 80/309 (25%), Gaps = 68/309 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +    + +WNIN                       L+ Q+ ++   D++ LQE       
Sbjct: 21  SMAFSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP--- 61

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP   +                S    +  +A   +      +        D     
Sbjct: 62  DDLFPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH-- 113

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+
Sbjct: 114 -----LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD 166

Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSR 244
                ++ GD N     N + ++    K +                            + 
Sbjct: 167 -GCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAAD 225

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+     +    +                    R SD
Sbjct: 226 QKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSD 278

Query: 295 HCPISIDYD 303
           H P+   +D
Sbjct: 279 HVPVIATFD 287


>gi|71737390|ref|YP_276477.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71557943|gb|AAZ37154.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 363

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 94/325 (28%), Gaps = 68/325 (20%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+                  + + +    +   + +  ++   DIV 
Sbjct: 52  GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 111

Query: 71  LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LQ +                   VA ++P +T   ++  E + N     S      A   
Sbjct: 112 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFVPNPHIWGS-VGRKLATLS 170

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
           R       +   P+  A     +   + A+ +      +G K+ V++  L +        
Sbjct: 171 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 228

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228
                      +Q    +  + + +    P++I GDFN             + +      
Sbjct: 229 --------TAQKQVVATEKQLDKLESCGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAADS 280

Query: 229 ---DPNDSLIRFPKEKDSR----CNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274
              +  +     P   +S          +  N   I       DY     +  +     S
Sbjct: 281 ELHELWEKYPMIPDNAESGGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 336

Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299
                      +     +SDH P+ 
Sbjct: 337 ARV-------RRDDTLLISDHLPVI 354


>gi|319942253|ref|ZP_08016568.1| exodeoxyribonuclease III Xth [Sutterella wadsworthensis 3_1_45B]
 gi|319804126|gb|EFW01026.1| exodeoxyribonuclease III Xth [Sutterella wadsworthensis 3_1_45B]
          Length = 269

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 72/305 (23%), Gaps = 65/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL SWN+N+L                      +  + ++   D + +QE  + + V   
Sbjct: 4   LRLASWNVNSL----------------KVRLPQVLDWLESAKIDALVMQETKTTDDV--- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +                +  +A+  +   V      L        +    
Sbjct: 45  -------FPQAAFAEAGFDVFFLGQKTYNGVALCSRQTTVKTSDVVLGLPGWPDPQKRFI 97

Query: 144 RAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            A+   +    +  I     +  +   + S +  Y             L+  +       
Sbjct: 98  SALLSPLAAPEQPPIRFCGGYFPNGQAVGSSKYLYKLD------WIAVLERTLKTYLADT 151

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              V+ GDFN                            + +        F          
Sbjct: 152 PRLVLGGDFNIAPADADVWNPEAWRGKILCSEPERKALERLFALGLYDSFRLFTQPAER- 210

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID  ++ +     +   S        DD      + SDH P+
Sbjct: 211 FSWWDYRQSGFERNHGLRIDLLLVSEALKGAVESASI-------DDGPRGNPQPSDHAPV 263

Query: 299 SIDYD 303
            +D  
Sbjct: 264 MLDLS 268


>gi|255010782|ref|ZP_05282908.1| hypothetical protein Bfra3_16703 [Bacteroides fragilis 3_1_12]
 gi|313148587|ref|ZP_07810780.1| endonuclease/exonuclease/phosphatase family [Bacteroides fragilis
           3_1_12]
 gi|313137354|gb|EFR54714.1| endonuclease/exonuclease/phosphatase family [Bacteroides fragilis
           3_1_12]
          Length = 339

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 92/342 (26%), Gaps = 57/342 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++A  F ++      AQ+       +  +N+  L +    +   +           
Sbjct: 1   MKKLIIAFGFLVLLSVGVRAQEHKDGLYSVAFYNLENLFDTIHDAGKNDYEYLPDAAKGW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           + ++  S    L +    L  D        + + E+ + N +  +  +       +    
Sbjct: 61  NSEKYHSKLKKLSKVLGELSRDKVPAGPAAIGVAEVENRNVLEDLIRQPEMA---AGGYR 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H +      I  A+    K       +  L    +  +    R  + +  E+ G K+ 
Sbjct: 118 YIHYEGPDKRGIDCALLYDPKQFTPRTTALVLSTPFEGDTIHKTRGFLIVGGELAGDKVC 177

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           ++  H  S            P     + Q + LKD + +  +  +  +I GD N      
Sbjct: 178 MIVNHWPSR-------GAEEPVRMHAAMQVKALKDSLMR-SDKDLKLIIMGDLNDDPMDQ 229

Query: 219 GN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ- 272
                          + +     +   +D               D  ++  +  +     
Sbjct: 230 SLAVLGAKKHVEDMTEDDLYNPWWVTLEDKGVGTLLYRGKWNLFDQIIISPSLLQAAKGL 289

Query: 273 -----------------ESFSEILYNEDDIKSRGKRLSDHCP 297
                              +          K      SDH P
Sbjct: 290 KYDHNEVFLREYLFQQEGRYKGSPLRTYGGKVWLDGYSDHLP 331


>gi|327404572|ref|YP_004345410.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
 gi|327320080|gb|AEA44572.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
          Length = 580

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 94/338 (27%), Gaps = 49/338 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++  +LAL+       ++    +R+VS+N+             N+     +D   LR+  
Sbjct: 1   MKYALLALLMAFGIAASAQMVPLRIVSYNLLNFPNGRNDCGGGNTNLPNRAD--TLRKIM 58

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           + L  DI+   E+ +      V  ++      +  +        S  D+   +      +
Sbjct: 59  QYLKPDILAGCEIQTAAGCDSVLNRSLNVFGTTYYQRAAFISNSSGGDLQNMLFYNSNKL 118

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            + +Q     G +D            L    +   I V   HLK+               
Sbjct: 119 TLKEQRIIQTGVRDINHYILYVNDNTLPQHHDTCFIEVFMCHLKAGSASAEQ-------- 170

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTID 229
           +  ++Q   L+  +  +        + GD N   +                 D    + +
Sbjct: 171 ATRAEQTALLRTVLDAR-PQGRHLFVCGDLNTYRSSEVCYQNLITGGASSLKDPINISGN 229

Query: 230 PNDSLIRFPKEKDSRCNANKNL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYN--- 281
             ++         S   +               D+ ++ QN         ++   Y    
Sbjct: 230 WTNNSSFAAIHTQSPRVSGSTDCGVTGGLDDRFDHILVSQNVMNGANLLQYTTSSYKAIG 289

Query: 282 ------------------EDDIKSRGKRLSDHCPISID 301
                              D +       SDH P+ +D
Sbjct: 290 NDGNHYNQSLLTGTNSQYPDSVVRALYYSSDHLPVKLD 327


>gi|315162099|gb|EFU06116.1| exodeoxyribonuclease III [Enterococcus faecalis TX0645]
          Length = 251

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTGLLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|229191862|ref|ZP_04318833.1| Exodeoxyribonuclease [Bacillus cereus ATCC 10876]
 gi|228591624|gb|EEK49472.1| Exodeoxyribonuclease [Bacillus cereus ATCC 10876]
          Length = 252

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 82/305 (26%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +   ADI  LQE+        +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  +++ ++  +        +             + L        +   
Sbjct: 93  ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I        +      + +A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSCILEEGFTDTYRYLYPDQESAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|281422472|ref|ZP_06253471.1| exodeoxyribonuclease III [Prevotella copri DSM 18205]
 gi|281403455|gb|EFB34135.1| exodeoxyribonuclease III [Prevotella copri DSM 18205]
          Length = 250

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G                      K LDAD   LQE          
Sbjct: 1   MKFISWNVNGLRACVGKDFE---------------NQFKELDADFFCLQETKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K+  +       +   D   R    
Sbjct: 45  LQFEGYESYWNYAEKKGY----------SGTAIYTKHKPLNVSYGMGVEEHDHEGRI--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   + +++  +  +        +          +  + L        ++  
Sbjct: 92  ------ITLEYDQFYLVTCYTPNSQTELKRLDYRMTWEDDFRKFLKSL--------DAKK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P +I GD N     +   +      +               ND      +          
Sbjct: 138 PVIICGDLNVAHEEIDIKNPKTNRRNAGFTDEEREKMTVLLNDGFTDSFRYLHPDEVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++     + + +      +             SDHCP+ +
Sbjct: 198 WWSYRFKAREKNAGWRIDYFLVSDRIKEQITEAKIHTEI-----------MGSDHCPVEV 246

Query: 301 DYDF 304
           D  F
Sbjct: 247 DLTF 250


>gi|324114357|gb|EGC08326.1| endonuclease/Exonuclease/phosphatase [Escherichia fergusonii B253]
          Length = 253

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F                 
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKMQAGLDE-----IFTHAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|313618350|gb|EFR90386.1| exodeoxyribonuclease III [Listeria innocua FSL S4-378]
          Length = 253

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L                        +Y + +DADI  LQE           
Sbjct: 4   KLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIEL 47

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++           +    ++  A+  K   +  Q    +   D+  R     
Sbjct: 48  DLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR----- 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +  +  +++ ++  +                        + +++    +   P
Sbjct: 93  ----VITLEFEDFYMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTKP 140

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            V+ GD N                           +        +  F        +A  
Sbjct: 141 VVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYS 200

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYFV+ +     L+       +             SDHCP+ +
Sbjct: 201 WWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVEL 249

Query: 301 DYD 303
           + +
Sbjct: 250 ELN 252


>gi|71280776|ref|YP_268694.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
           psychrerythraea 34H]
 gi|71146516|gb|AAZ26989.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
           psychrerythraea 34H]
          Length = 394

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/391 (9%), Positives = 99/391 (25%), Gaps = 88/391 (22%)

Query: 1   MIRKYVLALVFFLVPCTA-SVAQKVRLVSWNI-----------NTLSEQEGVSLWKNSVK 48
           M +  ++AL+ ++ P    +    +++ ++N+              +          ++ 
Sbjct: 1   MKKYSIIALIAWVFPTMTIAQETTLKIATFNVSMEALNYVAHKRGEAPNISGKTLTKALA 60

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF---------------- 92
                   + +  + ++ DI+ L E  + N   +                          
Sbjct: 61  SDHQQIKNIAEIIQTVNPDIILLNEFDNQNNDHQDLKAFISHYLNKNQNGKTAIDFPYYY 120

Query: 93  -----------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR-------VLQQSY 128
                                +L            H  +A+  K               +
Sbjct: 121 QGSVNTGVNSGMDIDGNGEKGKLPGDGYGFGYFPGHFGMALLSKYPINVDQIRTFQHFKW 180

Query: 129 PLLGAKDSFSRAGNRRAVE-----------------LLVEINGKKIWVLDIHLKSFCFLD 171
             +          + +A                   + VE+NGK I +L  H     F  
Sbjct: 181 HDMPNALMPIDPESNKAWYSQQVWQKLRLSSKSHWDVPVEVNGKTIHILASHPTPPVFDG 240

Query: 172 SLENTYSPSCSLLSQQAQWL----------KDWITQKKESLVPFVIAGDFNRKI-NYLGN 220
             +     +   +     ++                  ++   FVI GD N    +    
Sbjct: 241 PEDRNGKRNHDEIRFWQDYISPGKSSYIYDDKGNKGGIKAKQSFVILGDLNATTVDGNAI 300

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNKIPIDYFVMDQNAYKFLIQE 273
                  ++ +      P+ +    ++             ++ +DY +   +        
Sbjct: 301 KAGISSLLNDDKIQDAMPQSQAGEKHSPENAHGKYHTAFWRMRVDYVLPSVSGLNINNSG 360

Query: 274 SFSEILYNEDDIKSRGKRL-SDHCPISIDYD 303
            F     +E     + ++  SDH  + ++  
Sbjct: 361 IFWPAETDESYRLIKDRKASSDHRLVWLELT 391


>gi|308375155|ref|ZP_07442904.2| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu007]
 gi|308376392|ref|ZP_07438692.2| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu008]
 gi|308347245|gb|EFP36096.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu007]
 gi|308351175|gb|EFP40026.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu008]
          Length = 273

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 66/305 (21%), Gaps = 66/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  +    D D++ +QE    +     
Sbjct: 6   LRLATWNVN----------------SIRTRLDRVLDWLGRADVDVLAMQETKCPDG---- 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       D    +A+  +      +         S       
Sbjct: 46  ------QFPALPLFELGYDVAHVGFDQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAA 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
                 +      I V  +++ +   LD    TY             L+D          
Sbjct: 100 TTEARALGATCGGIRVWSLYVPNGRALDDPHYTYKLD------WLAALRDTAEGWLRDDP 153

Query: 203 -VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P  + GD+N                           +  I                  
Sbjct: 154 AAPIALMGDWNIAPTDDDVWSTEFFAGCTHVSEPERKAFNAIVDAQFTDVVRPFTPGP-G 212

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +                +       + +GK  SDH P
Sbjct: 213 VYTYWDYTQLRFPKKQGMRIDFILGSPALA-------ARVMDAQIVREERKGKAPSDHAP 265

Query: 298 ISIDY 302
           + +D 
Sbjct: 266 VLVDL 270


>gi|229544881|ref|ZP_04433606.1| exodeoxyribonuclease [Enterococcus faecalis TX1322]
 gi|256963841|ref|ZP_05568012.1| exonuclease III [Enterococcus faecalis HIP11704]
 gi|257081702|ref|ZP_05576063.1| exonuclease III [Enterococcus faecalis E1Sol]
 gi|257087702|ref|ZP_05582063.1| exonuclease III [Enterococcus faecalis D6]
 gi|257416904|ref|ZP_05593898.1| exonuclease III [Enterococcus faecalis AR01/DG]
 gi|257421653|ref|ZP_05598643.1| exodeoxyribonuclease [Enterococcus faecalis X98]
 gi|307271787|ref|ZP_07553058.1| exodeoxyribonuclease III [Enterococcus faecalis TX0855]
 gi|307278718|ref|ZP_07559785.1| exodeoxyribonuclease III [Enterococcus faecalis TX0860]
 gi|307288645|ref|ZP_07568626.1| exodeoxyribonuclease III [Enterococcus faecalis TX0109]
 gi|229309982|gb|EEN75969.1| exodeoxyribonuclease [Enterococcus faecalis TX1322]
 gi|256954337|gb|EEU70969.1| exonuclease III [Enterococcus faecalis HIP11704]
 gi|256989732|gb|EEU77034.1| exonuclease III [Enterococcus faecalis E1Sol]
 gi|256995732|gb|EEU83034.1| exonuclease III [Enterococcus faecalis D6]
 gi|257158732|gb|EEU88692.1| exonuclease III [Enterococcus faecalis ARO1/DG]
 gi|257163477|gb|EEU93437.1| exodeoxyribonuclease [Enterococcus faecalis X98]
 gi|295113675|emb|CBL32312.1| exodeoxyribonuclease III [Enterococcus sp. 7L76]
 gi|306500399|gb|EFM69735.1| exodeoxyribonuclease III [Enterococcus faecalis TX0109]
 gi|306504579|gb|EFM73782.1| exodeoxyribonuclease III [Enterococcus faecalis TX0860]
 gi|306511665|gb|EFM80664.1| exodeoxyribonuclease III [Enterococcus faecalis TX0855]
 gi|315025498|gb|EFT37430.1| exodeoxyribonuclease III [Enterococcus faecalis TX2137]
 gi|315032586|gb|EFT44518.1| exodeoxyribonuclease III [Enterococcus faecalis TX0017]
 gi|315143871|gb|EFT87887.1| exodeoxyribonuclease III [Enterococcus faecalis TX2141]
 gi|315155597|gb|EFT99613.1| exodeoxyribonuclease III [Enterococcus faecalis TX0043]
 gi|315165304|gb|EFU09321.1| exodeoxyribonuclease III [Enterococcus faecalis TX1302]
 gi|315168718|gb|EFU12735.1| exodeoxyribonuclease III [Enterococcus faecalis TX1341]
 gi|327535952|gb|AEA94786.1| exodeoxyribonuclease III [Enterococcus faecalis OG1RF]
          Length = 251

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|212694611|ref|ZP_03302739.1| hypothetical protein BACDOR_04139 [Bacteroides dorei DSM 17855]
 gi|237711123|ref|ZP_04541604.1| exodeoxyribonuclease [Bacteroides sp. 9_1_42FAA]
 gi|237727489|ref|ZP_04557970.1| exodeoxyribonuclease [Bacteroides sp. D4]
 gi|265750710|ref|ZP_06086773.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_33FAA]
 gi|212663112|gb|EEB23686.1| hypothetical protein BACDOR_04139 [Bacteroides dorei DSM 17855]
 gi|229434345|gb|EEO44422.1| exodeoxyribonuclease [Bacteroides dorei 5_1_36/D4]
 gi|229454967|gb|EEO60688.1| exodeoxyribonuclease [Bacteroides sp. 9_1_42FAA]
 gi|263237606|gb|EEZ23056.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_33FAA]
          Length = 252

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 73/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                             L+AD   LQE          
Sbjct: 2   LKFISWNVNGLRACYDKGF---------------ADAFNRLEADFFCLQETKMQEG-QLD 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +       +   D   R    
Sbjct: 46  VQFEGYQSYWNYAEKKGY----------SGTAIFSKVKPLSVTYGLGIEEHDHEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L++          
Sbjct: 92  -----VITLELESYYLITVYTPNSQEELRRLDYRMKWDDDFRAYLKKLEE--------KK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           + T+  +     F      +    
Sbjct: 139 PVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKFTTLLESGFTDTFRYFYPEQEGIY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+   +    L        +             SDHCP+ 
Sbjct: 199 SWWSYRFKAREKNAGWRIDYFLTSDSLKDKLRGAQIHTDIL-----------GSDHCPVE 247

Query: 300 IDYD 303
           +  +
Sbjct: 248 LTIE 251


>gi|163814023|ref|ZP_02205416.1| hypothetical protein COPEUT_00176 [Coprococcus eutactus ATCC 27759]
 gi|158450717|gb|EDP27712.1| hypothetical protein COPEUT_00176 [Coprococcus eutactus ATCC 27759]
          Length = 257

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N +    G                    +  ++DADI  +QE           
Sbjct: 8   KLISWNVNGIRACAGKGFM---------------DFFNSIDADIFCIQESKMQEG-QLTL 51

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++           ++   ++  A+  K   + +     +   D   R     
Sbjct: 52  DMPGYYQYWN----------YADKKGYSGTAIFTKEKSLSETKGIGIDEHDHEGR----- 96

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +  +  +++ ++  +     +  +             + L++          P
Sbjct: 97  ----VITLEYENFYMVTVYTPNSQNELARLDYRMKWEDDFRAYLKKLEE--------NKP 144

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GD N   N                     +    +  +  +  F      + N   
Sbjct: 145 VIVCGDMNVAHNEIDLKNPKTNRKNAGFTDEEREKMTVLLDDGFIDTFRYFYPDQENIYS 204

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF+  ++    LI                     SDHCP+ +
Sbjct: 205 WWSYRFKAREKNAGWRIDYFLTSESLKDKLIDAKIHT-----------DIMGSDHCPVEL 253

Query: 301 DYD 303
           D D
Sbjct: 254 DID 256


>gi|332885681|gb|EGK05927.1| hypothetical protein HMPREF9456_02191 [Dysgonomonas mossii DSM
           22836]
          Length = 351

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 92/298 (30%), Gaps = 63/298 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           SV + +R++++NI             N+      D   + ++AK  + DI  +QE    N
Sbjct: 99  SVGKNIRVMTFNI----------SQNNAGNNNYDDLQAIVEFAKTENVDIFCIQEYPDNN 148

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            V     K    + Y T           N   +  +A+  +      +      + +S  
Sbjct: 149 EVGDSLRKCLSFLPYYTFPE--------NVKGYLKVAIFSRYPIQNIKQMLFKNSYNS-- 198

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN--------------TYSPSCSLL 184
                 A+   + I  K I ++  HL++  F                      + +  + 
Sbjct: 199 ------AITTDLLIENKTIRLICAHLQTTNFNQKRIGSIWNTPSSLYKTISKMNVNQRIR 252

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           + QA  +++ I     S  P +  GD N                   D    F +  +  
Sbjct: 253 ASQADLIREEIRL---STTPVIFCGDMNDTPTSYTYKTI------KKDLQDGFEECGNGI 303

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +  K L + + IDY +  +       +                    SDH P+ +D 
Sbjct: 304 GHTYKGLFSVLRIDYILYSKEISGIKYESPKKV--------------YSDHNPVIMDL 347


>gi|312900096|ref|ZP_07759412.1| exodeoxyribonuclease III [Enterococcus faecalis TX0470]
 gi|311292731|gb|EFQ71287.1| exodeoxyribonuclease III [Enterococcus faecalis TX0470]
          Length = 251

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVFKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|302550593|ref|ZP_07302935.1| large secreted protein [Streptomyces viridochromogenes DSM 40736]
 gi|302468211|gb|EFL31304.1| large secreted protein [Streptomyces viridochromogenes DSM 40736]
          Length = 609

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 92/327 (28%), Gaps = 66/327 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + ++ + ++N+  L   +             +    +    K+   D+V L+E+   N  
Sbjct: 302 SSELAVATYNVENLDPSDDTFA---------AHAAAIVNNLKS--PDVVSLEEIQDNNGA 350

Query: 81  -----------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
                            A V        + S +   N    +   +I  A     + V  
Sbjct: 351 TNDGTVAADKTLTKLIDAIVAAGGPKYDWRSIDPANNTDGGEPGGNIRQAFLFNPERVSF 410

Query: 124 LQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
             ++                      P   A    +   +R+ +       G+ ++V+  
Sbjct: 411 TDRAGGDATTATAVTKIRGKAHLTLSPGRVAPSDEAWKNSRKPLAGEFVFRGRTVFVIAN 470

Query: 163 HLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKIN 216
           H  S      L + Y P    S +   QQA  +  ++    +       +  GD N    
Sbjct: 471 HFNSKGGDQGLTSQYRPPSRSSETQRHQQATLVNAFVKDILDTQKNADVIALGDINDF-- 528

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKE-KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                    + ++    L    K    S   +     N   +D  ++  +  +    E  
Sbjct: 529 ---EFSRTAQLLEGRGELWSAIKSLPRSERYSYTYQGNSQVLDQILISPSIRRDCAFE-- 583

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                +         ++SDH P  + +
Sbjct: 584 ---YDSVHINAEFNDQISDHDPQVLRF 607


>gi|290893090|ref|ZP_06556079.1| exodeoxyribonuclease [Listeria monocytogenes FSL J2-071]
 gi|290557450|gb|EFD90975.1| exodeoxyribonuclease [Listeria monocytogenes FSL J2-071]
          Length = 251

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 84/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y + +D+DI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFEEVDSDIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +++ ++  +                        + +++    +   
Sbjct: 91  -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|21220395|ref|NP_626174.1| large secreted protein [Streptomyces coelicolor A3(2)]
 gi|256788480|ref|ZP_05526911.1| large secreted protein [Streptomyces lividans TK24]
 gi|289772371|ref|ZP_06531749.1| large secreted protein [Streptomyces lividans TK24]
 gi|5420017|emb|CAB46409.1| putative large secreted protein [Streptomyces coelicolor A3(2)]
 gi|289702570|gb|EFD69999.1| large secreted protein [Streptomyces lividans TK24]
          Length = 613

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/327 (11%), Positives = 85/327 (25%), Gaps = 64/327 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A+++ + ++N+  L   +             +    +    K+   DIV L+E+   N 
Sbjct: 305 SARELAVATYNVENLDPSDDTFT---------AHAETIVHRLKS--PDIVSLEEIQDNNG 353

Query: 80  VAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                               V        +   + +          +I  A     + V 
Sbjct: 354 ATDDGTVAADATVGRLIDAIVAAGGPRYDWRGIDPVDKADGGQPGGNIRQAFLFNPERVS 413

Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
              ++                      P      + +   +R+ +       G+ ++V+ 
Sbjct: 414 FTDRAGGDATTATGVRKVRGKAALTHSPGRVDPANEAWEDSRKPLAGEFVFRGRTVFVVA 473

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
            H  S      L   Y P    S +    QA+ +  ++ +    +     V  GD N   
Sbjct: 474 NHFNSKGGDQGLTAQYQPPSRGSETQRHAQAKVVNTFVKEILAAQKNADVVALGDINDFE 533

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                                      S   +     N   +D  ++  +     ++   
Sbjct: 534 FS----RTARILEGDGALWSAVKSLPRSERYSYVYQGNSQVLDQILVSPS-----VRRGG 584

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                +         ++SDH P  + +
Sbjct: 585 HLSYDSVHVNAEFHDQISDHDPQVLRF 611


>gi|256854033|ref|ZP_05559398.1| exodeoxyribonuclease [Enterococcus faecalis T8]
 gi|307290261|ref|ZP_07570177.1| exodeoxyribonuclease III [Enterococcus faecalis TX0411]
 gi|256710976|gb|EEU26019.1| exodeoxyribonuclease [Enterococcus faecalis T8]
 gi|306498682|gb|EFM68183.1| exodeoxyribonuclease III [Enterococcus faecalis TX0411]
 gi|315030444|gb|EFT42376.1| exodeoxyribonuclease III [Enterococcus faecalis TX4000]
          Length = 251

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------ETHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|150005146|ref|YP_001299890.1| exodeoxyribonuclease [Bacteroides vulgatus ATCC 8482]
 gi|254883281|ref|ZP_05255991.1| exodeoxyribonuclease [Bacteroides sp. 4_3_47FAA]
 gi|294778957|ref|ZP_06744373.1| exodeoxyribonuclease III [Bacteroides vulgatus PC510]
 gi|319642656|ref|ZP_07997302.1| exodeoxyribonuclease [Bacteroides sp. 3_1_40A]
 gi|149933570|gb|ABR40268.1| exodeoxyribonuclease [Bacteroides vulgatus ATCC 8482]
 gi|254836074|gb|EET16383.1| exodeoxyribonuclease [Bacteroides sp. 4_3_47FAA]
 gi|294447266|gb|EFG15850.1| exodeoxyribonuclease III [Bacteroides vulgatus PC510]
 gi|317385744|gb|EFV66677.1| exodeoxyribonuclease [Bacteroides sp. 3_1_40A]
          Length = 252

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 74/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                             L+AD   LQE          
Sbjct: 2   LKFISWNVNGLRACYDKGF---------------VDVFHRLEADFFCLQETKMQEG-QLD 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +       +   D   R    
Sbjct: 46  AKFEGYHSYWNYAEKKGY----------SGTAIFSKVKPLSVTYGLGIEEHDHEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +             + L++          
Sbjct: 92  -----VITLELESFYLITVYTPNSQEELRRLDYRMKWEDDFRAYLKKLEE--------KK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           + T+  +     F      +    
Sbjct: 139 PVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKFTTLLESGFTDTFRYFYPEQEGIY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+   +    L        ++            SDHCP+ 
Sbjct: 199 SWWSYRFKAREKNSGWRIDYFLTSDSLKDRLKGAHIYTDIF-----------GSDHCPVE 247

Query: 300 IDYD 303
           +  +
Sbjct: 248 LTIE 251


>gi|119961356|ref|YP_946272.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1]
 gi|119948215|gb|ABM07126.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1]
          Length = 268

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/307 (9%), Positives = 75/307 (24%), Gaps = 69/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L                 +    +  + +  D D++ +QE    +     
Sbjct: 1   MKIATWNVNSL----------------RARADRVEAWLERSDCDVLAIQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + +       +    +A+  +      Q   L       +     
Sbjct: 41  ------NFPWELFERMGYEVAHFGVNQWNGVAIASRVGLDDVQRTFLDQPAFGKAGKDPA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201
           +     +      I +  +++ +   LD     Y        +    L+    +  +   
Sbjct: 95  QEARA-IAATCGGIRIWSLYVPNGRSLDDEHMPYK------IKWLDVLQGHAAEWVKSEP 147

Query: 202 LVPFVIAGDFNRKI-----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                + GD+N                    +        +   +               
Sbjct: 148 TAQIALMGDWNIAPFDDDVWDIELFRNNNYTHVSEPERAAFHAFETAGFTDVVRPYTPGP 207

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                ID+ +        +   S        D  + +GK  SDH
Sbjct: 208 -GVYTYWDYTQLRFPKKEGMRIDFCLASPALASRVTGASI-------DREERKGKGASDH 259

Query: 296 CPISIDY 302
            P+ ++ 
Sbjct: 260 APVIVEL 266


>gi|327395006|dbj|BAK12428.1| endonuclease/exonuclease/phosphatase [Pantoea ananatis AJ13355]
          Length = 371

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 74/259 (28%), Gaps = 23/259 (8%)

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            Q   +L ADI+ + E  S  A+ +           +    +     +    I   +   
Sbjct: 120 AQVMIDLKADILTVVEAESRPALLEFNNAMLPARQGTPFGHVMVIDGNDERGIDVGLMTG 179

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                   +S+     K              +   +G+ + VL  H KS           
Sbjct: 180 AGFAIDTIRSHVDDKDKQGDLIFSRDCPEFAIPLPDGQTLHVLVNHFKSK-----GYGAK 234

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           + S +    QA+ +K    Q+ +     + I GDFN   +     +     +   D    
Sbjct: 235 TLSDARRKLQAERVKAIYQQRIKEGQTLIAITGDFNDTPDS----EALAPLLKETDLKDI 290

Query: 237 FPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFS----------EILYNED 283
           F  EK                  IDY ++    +K + +                     
Sbjct: 291 FTHEKFDNGGYPGTWGGCSASNKIDYILLSPALWKKVEKGGVWRKGMWPGVRPVKWETYP 350

Query: 284 DIKSRGKRLSDHCPISIDY 302
           ++K      SDH  + +D 
Sbjct: 351 ELKKEVNAASDHAAVWVDL 369


>gi|304439168|ref|ZP_07399086.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372300|gb|EFM25888.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 254

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 83/303 (27%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + VSWN+N +         ++                + L+ DI+ LQE+          
Sbjct: 5   KFVSWNVNGIRAALKKGFMES---------------FEELNPDIIGLQEIKLSEG-QLDL 48

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               + ++++      +          +  AV  +   +       +   D   R     
Sbjct: 49  EIPGYHMYWNYAEKKGY----------SGTAVFTREEPLSVSYGIGIEEHDKEGR----- 93

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +   + + +  +  +     +  +          +    L        + + P
Sbjct: 94  ----VITLEYPEYYFITCYTPNSQRGLARLDYRMEWEEAFLEYLNRL--------DEVKP 141

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            V+ GD N   N                     D +  +        F      + +   
Sbjct: 142 VVLCGDLNVAHNEIDLKNPESNRKNAGFSDEERDKFTKLLEAGYTDTFRYLYPDKEDEYS 201

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDYFV+ +     +++ S  +               SDHCP+S+
Sbjct: 202 WWSYFRQARDRNIGWRIDYFVVSKVLEDKIVEASIHQ-----------NIMGSDHCPVSV 250

Query: 301 DYD 303
           + +
Sbjct: 251 ELN 253


>gi|126724355|ref|ZP_01740198.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium
           HTCC2150]
 gi|126705519|gb|EBA04609.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium
           HTCC2150]
          Length = 262

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 76/308 (24%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
              L +WNIN                       L+ ++      D++ LQE  S      
Sbjct: 2   PFTLATWNIN----------------SVRLREPLVCKFLAEHGPDVLCLQECKSPVDKIP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F +  +                +    +  +A+  K   V    +       +   A
Sbjct: 46  TESFAELGYTHMI-----------ANGQKGYNGVAILSKLPIVETHRFDFADLGHARHIA 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G               + + + ++ +    D      +   +   Q  + ++DW   +K 
Sbjct: 95  G----------KMENGVTIHNFYVPAG--GDEPNVEKNEKFAQKLQYLKDMRDWGQSEKP 142

Query: 201 SLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRC 245
           +    ++ GD N         D               +    +      +   +      
Sbjct: 143 TKS--ILVGDLNIAPLEDDVWDHKKLLKVVSHTPLEVEKLAEVQAAADWVDVTRADIPEG 200

Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +  K                     ++ SDH
Sbjct: 201 KLYSWWSYRARDWDTADKGRRLDHVWATSDIAKSGHSS-------RVIRDARGWEKPSDH 253

Query: 296 CPISIDYD 303
            PI  ++D
Sbjct: 254 APIITEFD 261


>gi|242239847|ref|YP_002988028.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703]
 gi|242131904|gb|ACS86206.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703]
          Length = 253

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/286 (11%), Positives = 83/286 (29%), Gaps = 49/286 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              +++ N +                        LR+  +++ AD+VFLQE+   +    
Sbjct: 9   SFTVLTINTHKGFSPFNRRF----------ILPELREAVRSVSADVVFLQEVQGRHETHP 58

Query: 83  V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P      F +     +++        +     AV  +      ++  +  ++  
Sbjct: 59  LHVESWPDTPHYEFLAETMWNDYAYGRNAVYPEGDHGNAVLSRFPIFSYRNLDISLSEH- 117

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +  ++++  + + +  + +                     +Q   L   + 
Sbjct: 118 ----ERRGLLYCVLKVPNRDLHLHVVCVHLGMSPH------------RQRQQMELLHTLL 161

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 VP V+AGDFN  +     + + +  ++       F +               + 
Sbjct: 162 DTIPPDVPLVVAGDFNDWLQQATPDLNRYARLEE-----VFSQHYGKPARTFPARFPLLR 216

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +                             LSDH P++++ 
Sbjct: 217 LDRIYVRN-----------VRTSAPTLLGPKPWSHLSDHAPLAVEI 251


>gi|315498514|ref|YP_004087318.1| exodeoxyribonuclease iii xth [Asticcacaulis excentricus CB 48]
 gi|315416526|gb|ADU13167.1| exodeoxyribonuclease III Xth [Asticcacaulis excentricus CB 48]
          Length = 263

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 76/303 (25%), Gaps = 64/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                   +   L+ ++ +    D+  LQE          
Sbjct: 1   MKIFTYNVN----------------SVNARLPLILEWFEETQPDVCALQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y     + ++           +A+  K   +        G         +R
Sbjct: 35  LKCLDEKFPYEPFERLGYNAAVHGQKTWNGVALLSKQPLIDVVR----GLPGEPEDEQSR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++       + V  I+L +   + + +  Y        +  + L+    +      
Sbjct: 91  YIEAVV--DGSVPVRVTSIYLPNGNPIGTDKYPYK------HRWYKRLQARAKEILAFEE 142

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTI-----------DPNDSLIRFPKEKDSRCNANK 249
             V++GDFN                  +             N              N   
Sbjct: 143 ISVLSGDFNTIPTKSDLYRESAWLDDALYQPETRAAYQSLKNLGYSDACDLMPPEGNRYT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L          +         + SDH P+ +
Sbjct: 203 FWDYQAGAWQKNEGIRIDHHLLSPQAADRLKSFEIH---KDARGRTHDDAKPSDHVPVGV 259

Query: 301 DYD 303
           + D
Sbjct: 260 ELD 262


>gi|110834792|ref|YP_693651.1| hypothetical protein ABO_1931 [Alcanivorax borkumensis SK2]
 gi|110647903|emb|CAL17379.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 315

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 84/285 (29%), Gaps = 21/285 (7%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRT--TSDYTLLRQYA--KNLDADIVFLQEMGSYNAVA 81
           L + N+  L ++   S   + V      +    L  +         ++  QE+ +   + 
Sbjct: 39  LATLNLWRLRDEHRHSKLDDPVSAMLLEARLNALADFIVVDLNAPHVLAFQEVENQIVLN 98

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++  +                + +  + +  A+  R         +      +       
Sbjct: 99  RLAERL---ALLGYRYRSVLREGNDPSGMDVAVMYRSPVNIGSVGTL-FSDQRLRGHALY 154

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R  + + +E       V+     +           +        QA  L +W+  ++  
Sbjct: 155 SRPPLVVDIEAPLAARLVVVHWRSAK------NLKKAQVYEKRQTQAALLANWVAAQRS- 207

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++AGDFN      G     ++  +    L  + +       + +       +D+  
Sbjct: 208 --PLIVAGDFNTTWGQ-GRFSASYRRFEQAGLLNTWAELPKKSRYSFRYRCQPQALDHIW 264

Query: 262 MDQNAYKFLIQESF---SEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +      F+ Q +        Y+          +SDH  + + + 
Sbjct: 265 VSPILKAFVNQVAVSRGHAGRYDSLYRSKGVSPVSDHDALVVYFT 309


>gi|134093694|ref|YP_001098769.1| hypothetical protein HEAR0422 [Herminiimonas arsenicoxydans]
 gi|133737597|emb|CAL60640.1| putative DNase I-like [Herminiimonas arsenicoxydans]
          Length = 337

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 95/317 (29%), Gaps = 39/317 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS---DYTLLRQYAKNLDADIVFLQEMGSYN 78
           Q++R  S+N+  L+              +         + Q    LDAD++ LQE+ S +
Sbjct: 3   QELRFASFNVCNLALPGMKYYDDQIPYSSEEYDVKINWIAQQLDRLDADVIGLQEIFSQD 62

Query: 79  AVAKVFPK-----NTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYP 129
           A+  V  K     +   I +  + L +H                  +  +    L  + P
Sbjct: 63  ALKDVLAKTQNYRDAQLIGFDPDPLTDHLTPSVALISRLPVSPGAVIYTELPNNLSVTLP 122

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL-----------KSFCFLDSLENTYS 178
            +    S      R  +   +EI    +  + +              +    D       
Sbjct: 123 GVHHPVS---RFTRPILHATIEIAPDLLTHVFVCHLKSKLPDYRNDNNDDHPDQAGIAML 179

Query: 179 PSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLG----------NNDDFWKT 227
            S       A  L+  ++   +    P ++ GDFN   + +             D     
Sbjct: 180 RSLIRRGTDALGLRTLLSNVNKKKRLPIIVMGDFNDVASAIPTQMVMGLGKYPLDGIDDR 239

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA--YKFLIQESFSEILYNEDDI 285
           +  +  +             + +      ID+ ++ +             +E++Y  D +
Sbjct: 240 LFESYRIQSRRDALRDVGYTHVHDGIYETIDHILVSEEFNPASRAAIGEVAEVMYLNDHM 299

Query: 286 KSRGKRLSDHCPISIDY 302
             +  + SDH  + +  
Sbjct: 300 TFKQPQASDHGLVLVRI 316


>gi|258648040|ref|ZP_05735509.1| exodeoxyribonuclease III [Prevotella tannerae ATCC 51259]
 gi|260851895|gb|EEX71764.1| exodeoxyribonuclease III [Prevotella tannerae ATCC 51259]
          Length = 250

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L   +G                  R   + +DAD   LQE          
Sbjct: 1   MKFISWNVNGLRAVDGKGF---------------RDIFRAIDADFFCLQETKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++      +          +  A+  K+  +  Q    +   D   R    
Sbjct: 45  IAFDGYESYWNYAEKKGY----------SGTAIFTKHKPLSVQIGLGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                      +  +  +  K ++  
Sbjct: 91  -----VITLELDDFYLVCVYTPN-------SQDELRRLDYRMIWEEAFQAHL-HKLDAHK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +  N  +  F         A 
Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREKMTQLLSNGFIDTFRYFHPDLTGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ +     L++ +                  SDHCP+ 
Sbjct: 198 SWWSYRFRAREKNTGWRIDYFLVSERLKPRLVEANIH-----------NDIMGSDHCPVE 246

Query: 300 IDY 302
           +  
Sbjct: 247 LIL 249


>gi|296165787|ref|ZP_06848295.1| exodeoxyribonuclease III [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295898860|gb|EFG78358.1| exodeoxyribonuclease III [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 322

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 76/313 (24%), Gaps = 64/313 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P +      +RL +WN+N                   S    +  +    D D++ +QE 
Sbjct: 46  PASPRSRSPLRLATWNVN----------------SIRSRLPRVVDWLARADVDVLAMQET 89

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +                    + +       +    +A+  +      +        
Sbjct: 90  KCSDG----------QFPTLPFFELGYEVAHVGFNQWNGVAIASRVGLDDVRVGFDGQPS 139

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S        A    +      + +  +++ +   L     TY        +    L+D 
Sbjct: 140 WSSKPEVAATAEARALGATCDGVRIWSLYVPNGRALGDPHYTYK------LEWLAALRDT 193

Query: 195 ITQKKESLVP--FVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIR 236
                         +AGD+N                           F   +D   + + 
Sbjct: 194 AAGWLRDDPAAQIALAGDWNIAPTDDDVWSTEFYAGATHVSEPERRAFAAIVDAQFTDVV 253

Query: 237 FPKEKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            P           +        R  + ID+ +        +               + +G
Sbjct: 254 RPFAPGPGVYTYWDYTQLRFPKRQGMRIDFILASPALADRVTDAQIV-------REERKG 306

Query: 290 KRLSDHCPISIDY 302
           K  SDH P+ ID 
Sbjct: 307 KAASDHAPVQIDI 319


>gi|312881196|ref|ZP_07740994.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309371088|gb|EFP98542.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 431

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 97/297 (32%), Gaps = 36/297 (12%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
             +V   +R++++N   L                 +    + +  K    D+VFLQE+  
Sbjct: 159 PTTVDDGLRMMTYNTWMLPYIGQER---------DTRARYIAEAVKGY--DVVFLQEVFD 207

Query: 77  YNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + F  +   ++ S +   N S           +    K      Q   +     
Sbjct: 208 LGNEDTINFLMSEEYVYRSEKLTANDSNTFDG-----GVLTYSKYPI-EFQDQLVFEHCT 261

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
               +G++ AV   +  +GK   + +IHL ++                   Q   L+ +I
Sbjct: 262 GTDCSGDKGAVYTKINHSGKAYHLFNIHLGAWNGDQHR--------QTRMAQLGELRVFI 313

Query: 196 -TQKKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
             Q+     P ++ GDFN  + +Y  +     + +D  D     P    S    N    N
Sbjct: 314 SAQQIAEHEPVIVGGDFNIDREHYPEDFQQMLRILDAYDPGESSPFRYSSDPYLNHFSLN 373

Query: 254 -------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  +  +DY ++ ++        S         ++  + + LSDH  +    +
Sbjct: 374 NDSTAIDRERLDYVLLLKSTSPKRYINSVLPRRVFTSELWGKWE-LSDHFAVEALIE 429


>gi|189350943|ref|YP_001946571.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616]
 gi|189334965|dbj|BAG44035.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616]
          Length = 258

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/300 (9%), Positives = 78/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE          
Sbjct: 1   MKIATWNVNSLN----------------VRKQHVLDWLAQSAVDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +    L      +           +
Sbjct: 35  LKLPDEKFPRADLEAAGYRSWFAGQKTYNGVAILAR--DTLPFDESDVVRNIPGFEDTQQ 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + + ++     + ++  +  +   + S +  Y        Q    L  W+  + +   
Sbjct: 93  RVIAVTID----GVRIVSAYFPNGQAVGSDKFLYK------MQWLDALHAWLRTEMQRYP 142

Query: 204 PFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHFAKLIELGFVDAFRRFEQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D +    ++ SDH P+  
Sbjct: 203 WWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEV-------DRVPRTWEQPSDHTPVVA 255


>gi|327333158|gb|EGE74885.1| exodeoxyribonuclease III [Propionibacterium acnes HL097PA1]
          Length = 297

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 80/320 (25%), Gaps = 64/320 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+NIN +                        ++ +  D D++ LQE+    A   +
Sbjct: 1   MRIASFNINGIRAALKRGF---------------SEWMEARDCDVIGLQEVRCRPA--DL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGAKDSFSRA 140
                     S        +        TA A       ++ +     P      + +  
Sbjct: 44  PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTD 103

Query: 141 GNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           G    +         + V++    + V  ++L      D                    +
Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFR 163

Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232
           D +     +       F++ GDFN                           F   + P+ 
Sbjct: 164 DHLVRRRQECTAQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDT 223

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +     +             +           IDY +         I           D
Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITAEI-------D 276

Query: 284 DIKSRGKRLSDHCPISIDYD 303
              S  +R SDH  + +DYD
Sbjct: 277 RDPSYSERTSDHAAVVVDYD 296


>gi|260854081|ref|YP_003227972.1| putative DNase [Escherichia coli O26:H11 str. 11368]
 gi|257752730|dbj|BAI24232.1| predicted DNase [Escherichia coli O26:H11 str. 11368]
 gi|323155689|gb|EFZ41860.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli EPECa14]
          Length = 253

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +       H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPKGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|257055607|ref|YP_003133439.1| Exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017]
 gi|256585479|gb|ACU96612.1| Exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017]
          Length = 259

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 73/304 (24%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    +  + ++   D++ LQE+   +     
Sbjct: 1   MRIATWNVN----------------SITARLPRVLAWLRSTQPDVLCLQELKCSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       +    +A+  +          L+           R
Sbjct: 41  ------GFPRDDITELGYDVASYGANRWNGVAILSRVGLEDVTRG-LVDEPTYEDALHPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                        + V  +++ +    D    TY        +  + L   +  +     
Sbjct: 94  AVAATC-----GGVRVWSVYVPNGREPDHPHYTYK------LRWLEALHTTVLAENSDDR 142

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GDFN                              +         P+         
Sbjct: 143 PFAVLGDFNIAPTDDDVWDISLFADSTHVTEPERKALARLRDAGLTDVVPRALKYD-RPY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    ++                  D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLAFPKNRGMRIDLVYANRPFADA-------VTDAYVDREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D  
Sbjct: 255 VDLT 258


>gi|49476204|ref|YP_034245.1| exodeoxyribonuclease III [Bartonella henselae str. Houston-1]
 gi|49239012|emb|CAF28312.1| Exodeoxyribonuclease III [Bartonella henselae str. Houston-1]
          Length = 269

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 85/309 (27%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
            RL +WNIN                        + QY +   ADI+ LQE    +A+   
Sbjct: 3   FRLATWNIN----------------SIRLRLAQIFQYLELFSADILCLQETKCPDALFPV 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K F    +                S    +  +A+  +      +       K  F +  
Sbjct: 47  KAFEAAGYKYIA-----------LSGQKSYNGVAIVSRLPFKSVE-------KRFFCQKQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             R + + VE+ GK + + + ++ +    D  +   +          + +   I   +  
Sbjct: 89  ECRYISVTVEVYGKSMRIHNFYVPAG--GDVPDADVNEKFRHKLDFLEEMSS-IQADQGD 145

Query: 202 LVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRC 245
            V   + GD N       + ++    K +                   +     +     
Sbjct: 146 GVSSFLVGDLNIAPLPEDVWSHKQLLKVVSHTPIETERLQALCCQGGWVDLMRMQFPVPT 205

Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +   F+ + S                + SDH
Sbjct: 206 KLYTWWSYRARDWALADRGRRLDHIWSSPDLTSFVAELSIFRHT-------RGWNQPSDH 258

Query: 296 CPISIDYDF 304
            P+   +DF
Sbjct: 259 VPVQTVFDF 267


>gi|254504315|ref|ZP_05116466.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
           DFL-11]
 gi|222440386|gb|EEE47065.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
           DFL-11]
          Length = 237

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 74/280 (26%), Gaps = 54/280 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NI            K+             +    L  D++ LQE        + 
Sbjct: 2   LKIGSYNIQ-----------KSIGVDARRRPDRTLKVIGELQCDVIALQEADKRFGPRES 50

Query: 84  -FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              ++      +   +       S      AI VR+    +  +   L            
Sbjct: 51  TLNRDHILAQTNFRPVPFAVGEHSLGWHGNAILVRQGIEILDHRRIELPTL-------EP 103

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV + +E+  +KI V  +HL                 S L  Q     D++       
Sbjct: 104 RGAVTVDLEVEDQKIRVAAMHLSLIGHF------RKKQISSLMHQLHEGLDYL------- 150

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P ++ GD N   +   +     K             E  +   +  +      +D  + 
Sbjct: 151 -PTILIGDLNEWRDDAKSIRLLEK-----------RYEVTTPGRSFPSPLPVGSLDRIIT 198

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                      +  SDH P+  + 
Sbjct: 199 SPEFTVQKAGV----------HKSKTARIASDHLPVWAEL 228


>gi|192292098|ref|YP_001992703.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
 gi|192285847|gb|ACF02228.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
          Length = 256

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L  + K    D+V LQE+ + +     
Sbjct: 1   MKIATFNVNNVN----------------KRLPVLLAWLKTARPDVVCLQELKAADT---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  R   ++   +       +A+  +   ++     L GA        +R
Sbjct: 41  ------DFPEAALRKAGYAAAWAGQKSWNGVAILARRREIVVTRRRLPGAP---HDKQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I V  ++  +       +     +        + L        +S  
Sbjct: 92  YIEAAV-----AGIIVGCLYAPNGNPQPGPKFDDKLA------WLKRLNRHAATLLKSGA 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN                           +  +                    
Sbjct: 141 PVVLAGDFNVVPTPADIYPGKSWDKDALVQPEPRKLFAALLRQGWTDALRHSHPEDA-PY 199

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID+ ++D +    L +          D         SDH P  
Sbjct: 200 TFWSYWRNRFERDAGLRIDHLLLDPSLAARLKRAGV-------DRKVRAAPEASDHAPAW 252

Query: 300 IDYD 303
           +  +
Sbjct: 253 VVIE 256


>gi|18310037|ref|NP_561971.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens str. 13]
 gi|18144716|dbj|BAB80761.1| hypothetical protein [Clostridium perfringens str. 13]
          Length = 256

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 91/293 (31%), Gaps = 55/293 (18%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N+    + +  + W       +     + +  K+   DI+  QE   +         
Sbjct: 1   MTFNLKYDFKAQDNNEW-------SQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLL 53

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------YPLLGAKDSFSRA 140
           + +         +   +  +  D   AI        VL+         P +     F+ +
Sbjct: 54  DEYS-------WVGEDREGNGKDEFNAIFFLNNKFEVLEWDQFWLSKTPNIKGSKDFNSS 106

Query: 141 GNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             R   +L ++  I+G KI + + HL         E        ++ ++ +         
Sbjct: 107 LPRICTKLKLKDKISGLKIDIYNTHL-----DHESELAREEGIKIILKEVK------KNY 155

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--------LIRFPKEKDSRCNANKN 250
                P++I GDFN  +      D+ +  I   ++                    +  K 
Sbjct: 156 SIEKTPYIIMGDFNCYL-----EDNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKG 210

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 IDY +  +          +     N DD K  G   SDH P+  + +
Sbjct: 211 GYEGKIIDYILYSKE---------YEIKSLNIDDRKIDGGYPSDHYPVICELE 254


>gi|254452861|ref|ZP_05066298.1| endonuclease/exonuclease/phosphatase [Octadecabacter antarcticus
           238]
 gi|198267267|gb|EDY91537.1| endonuclease/exonuclease/phosphatase [Octadecabacter antarcticus
           238]
          Length = 333

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 91/331 (27%), Gaps = 52/331 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--------LLRQYAKNLDADIVFLQEMG 75
           +++ ++N+   S     +       R +  +          L      LDAD + + E  
Sbjct: 1   MKIATYNVEWFSNLFDNAGNLYDDDRWSGRWDVTRAQQTAALGAVFAALDADGIMVIEGP 60

Query: 76  SYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             +A          +   +            ++             + V          +
Sbjct: 61  DSHAKRDGAAALEGFAARFGLRARKAIIGYVNDTQQEILFLYDPDVLNVRHDPREDGAPR 120

Query: 135 DSFSRAG-------------NRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSLENTY--S 178
              +                ++  +E  +   +G    ++ +H KS     +  +     
Sbjct: 121 FDGAIKMDLNVDAEAEDVHWSKPPLELAVTHTSGTDFRLIGVHAKSKAPHGAKTDAEVMR 180

Query: 179 PSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226
            S +   +Q      L+  +     +    ++ GDFN           F +         
Sbjct: 181 ISIANRRKQLAQCIWLRRRVEAHLAAEDNLIVLGDFNDGPGLDEYEKLFGRSGVEIVLGE 240

Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNA----YKFLIQ 272
                  DP+  +    +       A   +          +DY ++ Q       ++ I 
Sbjct: 241 GEGEQLFDPHARMALSQRIGAVPVTARFTVGPDRRFLSALLDYIMVSQGVRTMGAEWAIM 300

Query: 273 ESFSE-ILYNEDDIKSRGKRLSDHCPISIDY 302
             F +   + + D+ +     SDH P+ +D 
Sbjct: 301 HPFDDPKCFADKDLCAALLTASDHFPVVLDI 331


>gi|119961986|ref|YP_946639.1| 5'-nucleotidase family protein [Arthrobacter aurescens TC1]
 gi|119948845|gb|ABM07756.1| putative 5'-nucleotidase family protein [Arthrobacter aurescens
           TC1]
          Length = 1509

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 102/344 (29%), Gaps = 68/344 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGV----------------SLWKNSVKRTTSDYT----- 55
            A V   ++L S+N+       G                 ++ +    R  ++       
Sbjct: 502 AADVGGNLKLASFNVLNYFPTTGDQLAGCVFYTDREGNPITVKEGCNARGAANAENFERQ 561

Query: 56  --LLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRD 105
              +        AD+V L+E+ +         +A++K+            + +   +   
Sbjct: 562 QSKIVAAITKSGADVVSLEEIENSAQFGKNRDDALSKLVDALNVKTPGVWDYVRTPANAP 621

Query: 106 S---NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NGKKIW 158
                + I TA   +K     + +S       D+ + A  R+ +  L +     + KK  
Sbjct: 622 PLSDEDMIRTAFIYKKAAAEPVGESII---HNDTVAFASARKPLAQLFKPVGGDDDKKFI 678

Query: 159 VLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNR 213
            +  H KS       D  +     S    ++QA+ L  +    Q  +      + GDFN 
Sbjct: 679 AIVNHFKSKGSAATPDDTDKGQGASNIARTKQAESLLAFSKDLQASKGTDKVFLIGDFNA 738

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                  N      +           E  +  ++         +D+ +    A+K +   
Sbjct: 739 YAKEDPIN-----VLTGAGYTDL---EVGTGKHSYLFGGMVGSLDHILASPAAHKVVTGT 790

Query: 274 SFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303
               I   E       +              R SDH P+ +  +
Sbjct: 791 DIWNINSVESVALEYSRYNNNVTNYYAQDEFRASDHDPVVVGLN 834


>gi|332882010|ref|ZP_08449645.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332679934|gb|EGJ52896.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 250

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 78/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L         ++                  LDAD   LQE          
Sbjct: 1   MKFISWNVNGLRACCEKGFKES---------------FAALDADFFCLQETKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  ++  +       L   D   R    
Sbjct: 45  LEFEGYRSYWNYAEKKGY----------SGTAIFSRHAPLNVTYGLGLEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E+     +++ ++  +        +               L        ++  
Sbjct: 91  ---VITLEMPD--FFLVTVYTPNSQDGLKRLDYRMQWEEAFRAYLLQL--------DTRK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + +  +  +     F      R    
Sbjct: 138 PVIVCGDLNVAHREIDLKNPKSNRKNAGFTDEEREKFGILLDSGFTDTFRFFYPDREGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ +     L   +    ++            SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFLVSKRLEAQLKSATIHTEIF-----------GSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 VDL 249


>gi|323358249|ref|YP_004224645.1| exonuclease III [Microbacterium testaceum StLB037]
 gi|323274620|dbj|BAJ74765.1| exonuclease III [Microbacterium testaceum StLB037]
          Length = 281

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 78/304 (25%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +  T   ++      D++ +QE+         
Sbjct: 1   MRLATWNVN----------------SIRARVTRTVEFCVREHIDVLAMQEIKCKTE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y+      +       +    +A+  +      +            + G  
Sbjct: 41  ------QFPYAAFEEAGYHVAAHGLNQWNGVAIASREPLEDVEIGFPDMPGFEKGKEGPD 94

Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KE 200
              E   +      + V  +++ +   LD     Y           + L+ +      K+
Sbjct: 95  LPQEARAIGATVNGVRVWSLYVPNGRGLDDPHYAYKLD------WLEKLRQYTADTLAKD 148

Query: 201 SLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCN--------A 247
             +P  + GDFN       N D          + P +       E     +         
Sbjct: 149 PDLPLALTGDFNIAPTDADNGDPTVVEGATTHVSPAERAAFAAFETAGLTDVVRPLIPTG 208

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 K           ID+ +  +     +               + +G+  SDH P+
Sbjct: 209 YTYWDYKQLRFPRNEGLRIDFILGSRAFADAVQGAEIH-------RDERKGEVPSDHVPV 261

Query: 299 SIDY 302
             D 
Sbjct: 262 VADL 265


>gi|288926930|ref|ZP_06420828.1| AP endonuclease domain protein [Prevotella buccae D17]
 gi|288336289|gb|EFC74672.1| AP endonuclease domain protein [Prevotella buccae D17]
          Length = 365

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 83/300 (27%), Gaps = 68/300 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++S+N+         S               +  Y     ADI+ LQE       A+
Sbjct: 100 TLKVLSFNVQNFGYSADGSPGDGPNP--------IVSYLARSKADIICLQEANGQVIKAE 151

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +         + +E L + S           + +  +      +        +       
Sbjct: 152 LDSVMGRLYSHHSEELKDSSGDM--------LRLYSRFPIKRVERIHYQSYGNLS----- 198

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL------------------------ENTYS 178
              V  ++++NG+ + V++ HL+S     +                          +  +
Sbjct: 199 ---VAYVLDVNGEDVLVVNNHLESNLLNPTDKAGFKNLVKGELGRHEARQESTHLIDKLA 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            +    + Q   +  ++ +     +P ++ GDFN       +          N     + 
Sbjct: 256 AASRKRAPQVDSVAAYVARHIGR-MPVILCGDFNESPISYAHYRM------ENLLTDCYV 308

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +    +       + ID      +         +       DD        SDH PI
Sbjct: 309 SAGNGPGWSYHRSGMYVRIDNIFCSDD---------WKPYQCRVDDKIKE----SDHYPI 355


>gi|86607730|ref|YP_476492.1| exodeoxyribonuclease III [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556272|gb|ABD01229.1| exodeoxyribonuclease III [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 261

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 74/305 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84
           + +WN+N                   +    +  +  +  + D++ LQE        KV 
Sbjct: 3   VATWNVN----------------SIRTRLPQVLAWLDSQGSLDVLCLQE-------TKVV 39

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLGAKDSFSRAG 141
            ++     +                 +  +A+  ++     +      L  A D   +  
Sbjct: 40  DEDFPRAAFQERGFHVEVY---GQKSYNGVALISRDPPEKVERGFGALLPSAADLDEQKR 96

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A+        + I +L++++ +   + S +  Y        +    LKD++      
Sbjct: 97  LMSAIY-------RGIRILNLYVPNGAEVGSEKYAYK------LRWLATLKDYLAVALSQ 143

Query: 202 LVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNA 247
             P ++ GDFN  +      D                 + I        F +      + 
Sbjct: 144 GDPILLCGDFNIALEDRDIYDPQKAGEIMASEPERQALQEILALGFEDAFRRFTPDPGH- 202

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+  + +   +                   R ++ SDH P+
Sbjct: 203 FSWWDYRSGGFQRNRGWRIDHHYLSRELQEKATACWIDVE-------PRRAEKPSDHAPV 255

Query: 299 SIDYD 303
            +  D
Sbjct: 256 IVALD 260


>gi|332827347|gb|EGK00107.1| hypothetical protein HMPREF9455_03573 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 382

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/343 (11%), Positives = 94/343 (27%), Gaps = 79/343 (23%)

Query: 4   KYVLALVFFLVPCTASV----------------AQKVRLVSWNINTLSEQEGVSLWKNSV 47
           KY L  +  ++ C   +                A K++++++N+   +   G     N  
Sbjct: 76  KYALIQLVVILACWQPISTCFPVHMETKEKDIPANKIKVLTYNVRGFNWLTGEKAQNNP- 134

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQE-----------MGSYNAVAKVFPKNTWCIFYSTE 96
                    + +Y    +ADIV  QE           + S   + ++     +       
Sbjct: 135 ---------IFEYVTQCNADIVCFQEFAVAAKKGKGSIISLQELNEIMKDYPYRSIIELG 185

Query: 97  RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN----RRAVEL---- 148
           +     +          IA   K         P+  + +           R    +    
Sbjct: 186 KPRKTKRSYIY-----GIACYSKFPITESIKIPIQSSYNGSVIHKLEIDRRTVTLVVNHL 240

Query: 149 ---LVEINGKKIWVLDIHLKSFCFLDSL----ENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +    KK++   +  +     D +    ++    +  +   Q   ++ ++ ++   
Sbjct: 241 ESNRLTTEDKKLYKDFLKTRDRESFDEMANTLQDRLGAAYQIRESQVNLIRSFMDKQDAK 300

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               ++ GDFN        +          D +  +      +          + ID+ +
Sbjct: 301 --ATIVCGDFNDTPISYAYHTM------KGDLVDSYANSGFGQGITYHENYFWVRIDFIL 352

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +               +   +      + SDH P+     F
Sbjct: 353 HSRA--------------FESYNCTVDKVKYSDHYPVWTYLAF 381


>gi|320175211|gb|EFW50320.1| Endonuclease/Exonuclease/phosphatase family protein [Shigella
           dysenteriae CDC 74-1112]
          Length = 253

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI                         LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIQKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|222111827|ref|YP_002554091.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY]
 gi|221731271|gb|ACM34091.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY]
          Length = 291

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 85/313 (27%), Gaps = 61/313 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAVAKVF 84
           LV+WN       +G             D   + QYA  L D D++ LQE+          
Sbjct: 3   LVTWNTQWCRGLDG-----------RVDPARIVQYAVALGDVDVLCLQEIAVNYPGLAGS 51

Query: 85  PKNTWCIFYSTERLINH-------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           P +      S               +  +         +  +   +  Q +PL    D+ 
Sbjct: 52  PGDQVAQVQSALPAGWQVFFGAAVDEWTAAGRQRFGNLIATRLPVLQLQHHPLPYPPDAG 111

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            R+  R    L V+      + V+  HL+ +     +    + +   L  QA        
Sbjct: 112 VRSMPRLCSVLTVQDPALGPVRVMTTHLEYYSKPQRM--AQALALRALHLQACAQAAQRP 169

Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           Q      PF         V+ GDFN + +           +   +        +    +A
Sbjct: 170 QGLADGSPFQPKAHTPHAVLCGDFNLQAHE-PEYAMLAAALADEEGATAGQAGQPPLWDA 228

Query: 248 N------------------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                                    +  D+  +  +    +       +           
Sbjct: 229 WRLLHPGAPQPPTFCVFDQTYAPQPLACDFIWVSDSLRSRVRAVRVDGVT---------- 278

Query: 290 KRLSDHCPISIDY 302
            + SDH P+ ++ 
Sbjct: 279 -QASDHQPVLLEL 290


>gi|319949616|ref|ZP_08023657.1| hypothetical protein ES5_09158 [Dietzia cinnamea P4]
 gi|319436722|gb|EFV91801.1| hypothetical protein ES5_09158 [Dietzia cinnamea P4]
          Length = 319

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 80/286 (27%), Gaps = 33/286 (11%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              A  + +++WNI     +   +    +  R       +R    +    ++  QE+ + 
Sbjct: 32  PVPAPDLHVMTWNIR----RPVPAALTRAADRWRHRAPRVRALLASERPTVLCAQEVVAE 87

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                +             R  +                     +      P      S+
Sbjct: 88  QIPTVLDGLGPGHDHVGRGRSADGGGEACPVFYDATRLELLGWEQSALSDTPHRAGSVSW 147

Query: 138 SRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                R  VE+ +   I G ++ V++ HL               S     + A+ L + +
Sbjct: 148 GNLFPRVMVEVHLRDRITGHELLVVNTHLDPL------------SARSRLRSARALLEVV 195

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                  +P V+ GD N   +           T+  +  + R    +     A+     +
Sbjct: 196 ---AARGLPAVVTGDLNAGSSSPAVRVLLSDGTLVDSWRVARARHSEQWGTYADYRRPRR 252

Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               ID+ +   +          +      + ++  G   SDH  +
Sbjct: 253 DGARIDWILTTPDL---------TVTDAAINPLRHEGGWPSDHLAV 289


>gi|160894365|ref|ZP_02075142.1| hypothetical protein CLOL250_01918 [Clostridium sp. L2-50]
 gi|156864066|gb|EDO57497.1| hypothetical protein CLOL250_01918 [Clostridium sp. L2-50]
          Length = 262

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 82/307 (26%), Gaps = 78/307 (25%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  ++++SWN+N +    G +                  + K  DADI  +QE       
Sbjct: 9   STTMKMISWNVNGIRACVGKNFM---------------DFFKEADADIFCIQESKMQEG- 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +  +++      +          +  A+  K   +       +   D   R 
Sbjct: 53  QLQLELPGYYQYWNYAEKKGY----------SGTAIFAKKEPLSVAYGIGIEEHDHEGR- 101

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   ++ +     +++ ++  +     +  +          +  + L+        
Sbjct: 102 --------VITLEYDNFYMVTVYTPNSQNELARLDYRMKWEDDFREYLKQLEQ------- 146

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              P V+ GD N                         + + T+  +  +  F        
Sbjct: 147 -TKPVVVCGDMNVAHTEIDLKNPKTNRKNAGFTDEEREKFSTLLDSGFVDTFRFFNPDAE 205

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDYF+  +     L+       +             SDHC
Sbjct: 206 GIYSWWSYRFKAREKNAGWRIDYFLTSKVLESRLVDAKIHTEVL-----------GSDHC 254

Query: 297 PISIDYD 303
           P+ +D D
Sbjct: 255 PVELDID 261


>gi|119114058|ref|XP_319013.3| AGAP009893-PA [Anopheles gambiae str. PEST]
 gi|116118234|gb|EAA14395.3| AGAP009893-PA [Anopheles gambiae str. PEST]
          Length = 413

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 83/293 (28%), Gaps = 35/293 (11%)

Query: 36  EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95
             +G                 + +     D DI+ LQE+  +  + K+     +   +  
Sbjct: 110 HNDGFVRCPLEALTWECRRYQVIEEIVQNDPDIICLQEVDHFKFLQKILSTQNYEGVFFP 169

Query: 96  ERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
           +          +N     A+  +K  + ++     +L      S      AV   ++   
Sbjct: 170 KPDSPCLYINGNNGPDGCAVFYKKDRLEMVNHFTRVLEVWRVQSNQVAIAAVLRTLDTQ- 228

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           ++  V   HLK+           +    L ++Q + L  +I        P ++ GDFN +
Sbjct: 229 QEFCVTTTHLKA--------RKGALLSKLRNEQGKDLLYFIDGVA-ENRPVILCGDFNAE 279

Query: 215 INYLGN--------------NDDFWKTIDPNDS----LIRFPKEKDSRCNANKNLRNKI- 255
                                 D       +++    L    ++  +        + +  
Sbjct: 280 PIEPIYSTVLNYKPLGLASAYSDLLAEESQDENNQNALNTVAEQSAAYEPPYTTWKIREE 339

Query: 256 -----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 IDY    ++         F        D     +  SDH  +  D +
Sbjct: 340 GEVCHTIDYVFYSKDKLTVKNCLMFPSGEEIGVDRTPSFQYPSDHFSLVCDIE 392


>gi|256961018|ref|ZP_05565189.1| exonuclease III [Enterococcus faecalis Merz96]
 gi|293384592|ref|ZP_06630458.1| exodeoxyribonuclease III [Enterococcus faecalis R712]
 gi|293386821|ref|ZP_06631392.1| exodeoxyribonuclease III [Enterococcus faecalis S613]
 gi|312906418|ref|ZP_07765426.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 512]
 gi|312979423|ref|ZP_07791111.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 516]
 gi|256951514|gb|EEU68146.1| exonuclease III [Enterococcus faecalis Merz96]
 gi|291078138|gb|EFE15502.1| exodeoxyribonuclease III [Enterococcus faecalis R712]
 gi|291083824|gb|EFE20787.1| exodeoxyribonuclease III [Enterococcus faecalis S613]
 gi|310627572|gb|EFQ10855.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 512]
 gi|311287794|gb|EFQ66350.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 516]
 gi|315170467|gb|EFU14484.1| exodeoxyribonuclease III [Enterococcus faecalis TX1342]
          Length = 251

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGV-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|300771464|ref|ZP_07081339.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761453|gb|EFK58274.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 371

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 65/306 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    +R++S+N++     +         +        +     ++  D++  QE  S 
Sbjct: 104 TAADSSIRVLSFNVHLFKTAKKGEEKDFKRE--------VLGIIDSIKPDVICFQEYYSK 155

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                V+ K     F         +  +         A+  K   +              
Sbjct: 156 IKGKHVYAKELRENFGYKYWYFEPASVNDY--EAYGQAIFSKYPVI-------HSGTIVK 206

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-------------------TYS 178
           +  G  R +   +E   K + + ++HL+SF   +  ++                      
Sbjct: 207 NEYGINRIIYADIEKGKKSMRIYNVHLRSFALQNEDKDFIQNPSGESNKTATRRVGRKLK 266

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLI 235
            + +  S+QA+ LK+ I     + +P+++ GDFN        N              S  
Sbjct: 267 QAFASRSEQAEALKEHIET---AKIPYMVMGDFNDTPMSYSVNLIGKGMQNAFQKKGSGW 323

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                +               IDY    ++              +N  + +   ++LSDH
Sbjct: 324 GVTHYEMLPIFQ---------IDYIFTSKD--------------FNILNYQIVKRKLSDH 360

Query: 296 CPISID 301
            PI  D
Sbjct: 361 YPIWAD 366


>gi|225420139|ref|ZP_03762442.1| hypothetical protein CLOSTASPAR_06482 [Clostridium asparagiforme
           DSM 15981]
 gi|225041196|gb|EEG51442.1| hypothetical protein CLOSTASPAR_06482 [Clostridium asparagiforme
           DSM 15981]
          Length = 251

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 78/303 (25%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L    G                    Y K  DAD+  LQE           
Sbjct: 3   KLISWNVNGLRACVGKGF---------------LDYFKEADADVFCLQETKLQEG-QIDL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++  +   +          +  A+  K   V  +    +   D   R     
Sbjct: 47  DLPGYHQYWNYAQKKGY----------SGTAMFTKEEPVSVRYGLGIEEHDMEGR----- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++    ++ +V+  +  +     +  +      +      + L++          P
Sbjct: 92  ----VIAAEFQEYFVVTCYTPNSQDGLARLDYRMEWENAFLAYLKKLEE--------EKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +  GD N                           +  +     +  F      R     
Sbjct: 140 VIFCGDLNVAHKEIDLKNPKSNRKNAGFTDEERGKFTDLLGAGFIDTFRYFYPDREGIYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF   ++    L+       +             SDHCP+ +
Sbjct: 200 WWSYRFSARAKNAGWRIDYFCASESLKDRLVSADIHTEV-----------MGSDHCPVEL 248

Query: 301 DYD 303
             +
Sbjct: 249 VIE 251


>gi|307153787|ref|YP_003889171.1| exodeoxyribonuclease III [Cyanothece sp. PCC 7822]
 gi|306984015|gb|ADN15896.1| exodeoxyribonuclease III [Cyanothece sp. PCC 7822]
          Length = 264

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 90/305 (29%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                        +  + +    D++ LQE  +   +   
Sbjct: 1   MKIATWNVN----------------SIRIRQQQVSHWLQMNPVDVLCLQETKVIDADFPK 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F +  + ++ S +              +  +A+  +      +             A 
Sbjct: 45  MPFEELGYHLYISGQPS------------YNGVALLSRQPLEDVRIGFTQVLGVDDVLAA 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                + ++      + ++++++ +   L S +  Y        Q  + L++++T  KE+
Sbjct: 93  TFDQQKRVISGIFHDVRIVNLYVPNGADLSSDKYAYK------LQWLKMLRNYLTLFKEN 146

Query: 202 -LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCN 246
                 + GDFN        ++   K                     L    ++  +   
Sbjct: 147 YPQELCVCGDFNVAPEDKDIHNPKGKETHIMATPQERKALQEVLEIGLKDAFRKFTAEGG 206

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  +    Y+     +       ++       + SDH P
Sbjct: 207 HYSWWDYRSGGFQRNRGWRIDHHFLTPKLYEQATSCTIDIEPRKQE-------KPSDHTP 259

Query: 298 ISIDY 302
           + +++
Sbjct: 260 VIVEF 264


>gi|237746873|ref|ZP_04577353.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229378224|gb|EEO28315.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 321

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 101/319 (31%), Gaps = 39/319 (12%)

Query: 22  QKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           Q++RL ++N+  L   E      L   + +   +    + +     DAD++  QE+ S  
Sbjct: 3   QEIRLATFNVRNLVLPEIAYYDDLPPYTQEEYEAKTAWIAEKIDQSDADVIGFQEIFSKQ 62

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-------NVRVLQQSYPLL 131
           A+  V  K             + +   +      A+  R         +    +Q    L
Sbjct: 63  ALNDVVAKTRHYREAHLI-CFDRNHLPAALKPQVALLSRFPLAGSPQTHQLFPRQFQITL 121

Query: 132 GAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              D+     +R  +E  +   NG+ + +  +HLKS           S          + 
Sbjct: 122 PITDTLINRFSRPVLEAPVFLPNGQILNIYVVHLKSKRPDFVSFVNKSDPYQYGLAALRS 181

Query: 191 LKDWITQ-----------KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS------ 233
           L                 ++ + +P  I GDFN     +       +  +          
Sbjct: 182 LMRRAADALGVRALVAEFRQNNALPIAILGDFNDFSLAVSTRIVTGEEHESEQPLSPFYR 241

Query: 234 -LIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKF--LIQESFSEILYNEDDI 285
               F  + D   + N   +         ID+  + +   +    +     +++Y ++D 
Sbjct: 242 LYDCFEIQSDPDHHMNNLSQFLEENGTPRIDHIFVSEEFTEESGFLTGKIKKMVYLQNDG 301

Query: 286 KSRGKRLSDH--CPISIDY 302
                 LSDH    ++I+ 
Sbjct: 302 DPDNPELSDHSLALVTIEL 320


>gi|50843350|ref|YP_056577.1| exodeoxyribonuclease III [Propionibacterium acnes KPA171202]
 gi|50840952|gb|AAT83619.1| exodeoxyribonuclease III [Propionibacterium acnes KPA171202]
 gi|315106020|gb|EFT77996.1| exodeoxyribonuclease III [Propionibacterium acnes HL030PA1]
          Length = 297

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 80/320 (25%), Gaps = 64/320 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+NIN +                        ++ +  D D++ LQE+    A   +
Sbjct: 1   MRIASFNINGIRAALKRGF---------------SEWMEARDCDVIGLQEVRCRPA--DL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGAKDSFSRA 140
                     S        +        TA A       ++ +     P      + +  
Sbjct: 44  PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTD 103

Query: 141 GNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           G    +         + V++    + V  ++L      D                    +
Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFR 163

Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232
           D +     +       F++ GDFN                           F   + P+ 
Sbjct: 164 DHLVRRRQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDT 223

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +     +             +           IDY +         I           D
Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITAEI-------D 276

Query: 284 DIKSRGKRLSDHCPISIDYD 303
              S  +R SDH  + +DYD
Sbjct: 277 RDPSYSERTSDHAAVVVDYD 296


>gi|88860007|ref|ZP_01134646.1| exodeoxyribonuclease III [Pseudoalteromonas tunicata D2]
 gi|88818001|gb|EAR27817.1| exodeoxyribonuclease III [Pseudoalteromonas tunicata D2]
          Length = 267

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/309 (10%), Positives = 78/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN L                 +    L+   +    D++ LQE+  ++     
Sbjct: 1   MKIISFNINGL----------------RARLHQLQALIEKHQPDVIGLQEIKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   +  +     G       A  R
Sbjct: 42  -------FPLADVEAMGYHVYFHGQKAHYGVAMLCKKEPLSIEK----GFPTDTDEAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                + +  G+ + +++       F       +        Q  + L  ++  +  +  
Sbjct: 91  MITVTIEDEQGQPVKIMN-----GYFPQGDSIHHETKFPYKEQFYKDLMTYLASQDPASQ 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             V+ GD N                        ++      +   +        F +   
Sbjct: 146 -LVVMGDINISPLDKDIGIGEVNAKRWLKTGKCSFQPIERQWLADLMAWGFTDTFRQIHP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +   +     +           D       + S
Sbjct: 205 DTNAHFSWFDYRSKGFDDNRGLRIDVILATASLAARCVDAGI-------DYELRAIDKPS 257

Query: 294 DHCPISIDY 302
           DH PI   +
Sbjct: 258 DHAPIWASF 266


>gi|262372803|ref|ZP_06066082.1| nuclease [Acinetobacter junii SH205]
 gi|262312828|gb|EEY93913.1| nuclease [Acinetobacter junii SH205]
          Length = 812

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 96/326 (29%), Gaps = 50/326 (15%)

Query: 20  VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGS 76
             + +R  ++N+ N    + G    + +  +   D     +    K++DAD+  L E+ +
Sbjct: 461 QTKHIRAAAFNVLNYDKGKNGFPTERGANSQAEFDKQHAKIISALKSIDADVYGLMEIAN 520

Query: 77  YNAVAKVFPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               +               +        +   + I  AI    K V+ + ++  L    
Sbjct: 521 NGYGSDSAVAYLTKALGPDWKYVIPESINQLGTDVIAVAIIYNSKRVQPVNKAAVL---- 576

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--------LLSQ 186
           D   +  +  A        G+   V+  HLKS        N+                 +
Sbjct: 577 DLGEKNRSTIAQSFKPVHGGQIFTVIPNHLKSKSCSGVDLNSLDADQKDGQGCWNPTRVK 636

Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             + L  WI +          ++ GD N         D        N  ++    +    
Sbjct: 637 AVEQLTQWIAKNPTQVKNPNILLLGDMN----SYAKEDPILAFEKANYKVLLNDSKIGEG 692

Query: 245 CNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----- 289
            NA                   +D+ + D N YK +++     I  +E  +         
Sbjct: 693 TNAYSYVFGVSSNSDGYGGAGNLDHAIADANLYKRVVKAFAWHINADEPTVLDYNEEYKT 752

Query: 290 ------------KRLSDHCPISIDYD 303
                        R SDH P+ +D D
Sbjct: 753 DEQKELFFAADPYRSSDHDPVIVDLD 778


>gi|300860584|ref|ZP_07106671.1| exodeoxyribonuclease III [Enterococcus faecalis TUSoD Ef11]
 gi|300849623|gb|EFK77373.1| exodeoxyribonuclease III [Enterococcus faecalis TUSoD Ef11]
          Length = 251

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNF---------------LDVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|228959948|ref|ZP_04121613.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228799691|gb|EEM46643.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 252

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +   ADI  LQE+        +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  +++ ++  +        +             + L        +   
Sbjct: 93  ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +     ++  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSCILEEGFIDTYRYLYPNQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|227519480|ref|ZP_03949529.1| exodeoxyribonuclease [Enterococcus faecalis TX0104]
 gi|227073092|gb|EEI11055.1| exodeoxyribonuclease [Enterococcus faecalis TX0104]
 gi|315151770|gb|EFT95786.1| exodeoxyribonuclease III [Enterococcus faecalis TX0012]
          Length = 251

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 77/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +           ++ +  +   
Sbjct: 91  -----VITLEYPEFFIVTCYTPN-------SQAELKRLAYRMTWEDAFSAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|295839581|ref|ZP_06826514.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SPB74]
 gi|197696835|gb|EDY43768.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SPB74]
          Length = 614

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/329 (10%), Positives = 78/329 (23%), Gaps = 69/329 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72
                   ++ + ++N+  L   +             + +  L           DIV ++
Sbjct: 302 SAKPGADGELSVATYNVENLDPGDP-----------QAKFDALADGVVTHLASPDIVSIE 350

Query: 73  EMGSYNAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           E+   N                     V        +   +   +    +   +I     
Sbjct: 351 EVQDDNGAKDDGTVSAELTLREFTDAIVAKGGPRYAWRGIDPENDKDGGEPGGNIRQVFL 410

Query: 116 VRKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEING 154
                V    ++                      P      + +   +R+ +       G
Sbjct: 411 YNPDRVSFTDRTGGDATTATAVVEREGSPALAVSPGRVDPANPAWEDSRKPLAGEFVFRG 470

Query: 155 KKIWVLDIHLKSFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208
           +K++V+  H  S    + L          S +    QA  +  ++ Q    ++    V+ 
Sbjct: 471 EKVFVVANHFSSKGGDEPLTAERQPPVRASETRRHAQAASVNAFVRQLTALDAKARVVVL 530

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GD N                          +             N   +D  ++ +    
Sbjct: 531 GDLNDFEFSATTK----ALTKGKVLRPGIERLPADERYTYVYQGNSQVLDQILVSKGITS 586

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           F          + + +        SDH P
Sbjct: 587 FTYDSVHINAEFAQQN--------SDHDP 607


>gi|301163534|emb|CBW23085.1| exodeoxyribonuclease [Bacteroides fragilis 638R]
          Length = 253

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 87/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N+N L       L                ++    + D++ LQE  +      A
Sbjct: 1   MKIITYNVNGLRAAVNKGLP---------------EWLAEENPDVLCLQETKLQPEQYPA 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  +  + +   +          + +A+  K        +   G         
Sbjct: 46  EAFEALGYKAYLYSAQKKGY----------SGVAILTKVEP----DHIEYGMGIEEYDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++  S    D  +       +      +  + ++T+ ++S
Sbjct: 92  GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEAFQKYVTELRKS 139

Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                         +   + +               + 
Sbjct: 140 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRTLYPQKQE 199

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + R           IDY ++ +     L +        +           SDHCP+
Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAVILNNAVH-----------SDHCPM 248

Query: 299 SIDYD 303
           +++  
Sbjct: 249 ALEIS 253


>gi|229111211|ref|ZP_04240765.1| Exodeoxyribonuclease [Bacillus cereus Rock1-15]
 gi|229146311|ref|ZP_04274682.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST24]
 gi|296504242|ref|YP_003665942.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171]
 gi|228636944|gb|EEK93403.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST24]
 gi|228672205|gb|EEL27495.1| Exodeoxyribonuclease [Bacillus cereus Rock1-15]
 gi|296325294|gb|ADH08222.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171]
          Length = 252

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +               +Y +   ADI  LQE+        +
Sbjct: 1   MKLISWNVNGLRAVIAKGGF--------------LEYLEESSADIFCLQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NLEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  +++ ++  +        +             + L        +   
Sbjct: 93  ------ITLEFEDFYMITLYTPNSKRGLERLDYRMKWEDDFRSYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +     + +  I     +  +     ++  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKSNRENPGFSDEEREKFSCILEEGFIDTYRYLYPNQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     + +   +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|218549643|ref|YP_002383434.1| metal-dependent hydrolase [Escherichia fergusonii ATCC 35469]
 gi|218357184|emb|CAQ89819.1| putative metal-dependent hydrolase [Escherichia fergusonii ATCC
           35469]
          Length = 253

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 83/295 (28%), Gaps = 53/295 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +     ++++ NI+                        LR   + + ADIV LQE+ 
Sbjct: 2   PVQTQQFSFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVM 51

Query: 76  SYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             + V  +    +P  +   F +     +  + +     + H   AV  +          
Sbjct: 52  GAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----H 106

Query: 130 LLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 S   A  R  +   +     GK I V+ +HL                 +    Q
Sbjct: 107 YENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQ 153

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L +W+ +      P ++AGDFN       +       +D       F +        
Sbjct: 154 LAMLAEWVNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPART 207

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  + +D   +   +                       + LSDH P+S + 
Sbjct: 208 FPVQFPLLRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|254255473|ref|ZP_04948789.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
 gi|124901210|gb|EAY71960.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
          Length = 401

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 81/285 (28%), Gaps = 66/285 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75
            + +R+ ++NI                  +      +    + LDAD++ LQE+      
Sbjct: 164 GRDLRIATYNI-----------GGGYGTWSVPAADRIAAVIEELDADVIALQEVPLGGTH 212

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           + + +A +                               AV  +      ++  L     
Sbjct: 213 APDVLAHLRDATGMHAVAGPTIDTPE--------RRYGNAVLSRCPIRAARTLDL----- 259

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           SF +   R A++  ++     I V+  HL               S S  S Q Q L   +
Sbjct: 260 SFHQREPRGALDADIDCIAGPIRVVATHLGL-------------SASERSAQVQRL---L 303

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                  +P ++ GD N         + F +       + RF +    R           
Sbjct: 304 AAFDTGAMPVILLGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPTVCPVF-- 352

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +D   +               ++       +R +  SDH P+  
Sbjct: 353 ALDRIWVHPG----------ELLVDVVVHRSARARHASDHYPLVA 387


>gi|153006976|ref|YP_001381301.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. Fw109-5]
 gi|152030549|gb|ABS28317.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. Fw109-5]
          Length = 248

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 76/303 (25%), Gaps = 80/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    + ++      D+V LQE+ +  A    
Sbjct: 1   MKIGTWNVNG----------------IRAREAQVAEWIAREHPDVVCLQEIKAPPA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  S   L  +         ++ + +  +     ++                R
Sbjct: 41  ------RVPPSLCELEGYWCLWHGATAYSGVGLHVRRELAAER----PAFTHPDFDLETR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV  +       + V  +++ +                   +  + L  W+     +  
Sbjct: 91  IAVAEV-----AGVTVASVYVPNGG----------KDYPAKLRFLEALDRWVEAACAAGR 135

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD N        +                  ++ I  +  +        +     
Sbjct: 136 PLVVAGDLNVARTDQDVHPKERKAGAIGQRPDERAVFERILSHGLVDLGRAMDPTNEGLF 195

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDY ++     +   + +                  SDH P+ 
Sbjct: 196 TYWAPWRNLRQRNIGWRIDYVLVSAALARRATRCAVL-----------ADFGTSDHAPLV 244

Query: 300 IDY 302
            + 
Sbjct: 245 AEL 247


>gi|70732070|ref|YP_261826.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf-5]
 gi|68346369|gb|AAY93975.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf-5]
          Length = 258

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/290 (11%), Positives = 77/290 (26%), Gaps = 52/290 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--G 75
           A     +++++ NI+                        LR   ++   D+VFLQE+   
Sbjct: 12  APAVASLKVLTLNIHKGFTFLNRRF----------ILPQLRDAVRSTGTDLVFLQEVLGD 61

Query: 76  SYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                 +         +     S      + +     +     A+  K   +  Q+  + 
Sbjct: 62  HSQHAKRFGNWPQQPHYEFLADSMWHEFAYGRNAVYPEGEHGNALLSKYPILSHQNLDVS 121

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              D       R  +  ++ + G+++  + +HL                 +    Q + L
Sbjct: 122 QQGD-----EQRGLLHSVLAVPGREVHAICVHLGLR-------------EAHRWHQLRLL 163

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              +          ++AGDFN               +        F +       +    
Sbjct: 164 CALVRG-LPPRATVIVAGDFNDW------RRRADALLAQQGLHEAFVRHGGRPARSFPAR 216

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              + +D   +                             LSDH P++++
Sbjct: 217 WPLLRLDRIYVRNAR-----------TCAPRVLSTRPWSHLSDHAPLAVE 255


>gi|283850748|ref|ZP_06368035.1| exodeoxyribonuclease III Xth [Desulfovibrio sp. FW1012B]
 gi|283573991|gb|EFC21964.1| exodeoxyribonuclease III Xth [Desulfovibrio sp. FW1012B]
          Length = 254

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 75/302 (24%), Gaps = 76/302 (25%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWN+N L        W               ++     AD+V +QE          F 
Sbjct: 3   LMSWNVNGLRAVVQKGFW---------------EWLSGSGADVVGIQESKLQTGHEADFG 47

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                    T          +    ++ +    +           L   D+      R  
Sbjct: 48  --------HTGGYKTVWLSSTVKKGYSGVGCLYRVEPRSIG----LDLPDAAWCGEGRL- 94

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               +++     +  +++  +                     A+ L+           P 
Sbjct: 95  ----IQMEFNDFYFFNVYFPNGGRGPERLAYKLGYYEAFLAHAEALRR--------KKPI 142

Query: 206 VIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+ GDFN                   +L     +         +  F   +    +    
Sbjct: 143 VVCGDFNTAHTALDLKNAKANEKTSGFLPEERAWLDGFVAAGYVDTFRMFEKEGGH-YSW 201

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           IDYF + +     + +      ++            SDHCP+ ++
Sbjct: 202 WDYRFKARDRNVGWRIDYFFVSEELRPRVKRAWIDNTVF-----------GSDHCPVGLE 250

Query: 302 YD 303
            D
Sbjct: 251 ID 252


>gi|260593320|ref|ZP_05858778.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           veroralis F0319]
 gi|260534732|gb|EEX17349.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           veroralis F0319]
          Length = 362

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/351 (13%), Positives = 101/351 (28%), Gaps = 64/351 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50
           +RK + AL+  L+  T++ AQK      +  +N   L +        +       S    
Sbjct: 16  MRKLLFALICTLLVGTSASAQKKFSVYAVGFYNQENLFDCTHDEGKNDYDFTPNGSYHWN 75

Query: 51  T----SDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
                     +      +  D        ++ L E+ + + +  +  +       +    
Sbjct: 76  EMKYSHKLHNMSTVLAEMGTDVLPNVGCAVIGLAEVENNHVMRDLVAQP---ALAARGYK 132

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +   +  I  A+        +      P +      S    R  + +   + G+ +
Sbjct: 133 FVHIEGPDHRGIDCALIYNPNLFTIRNTKLVPYVYDLPQDSTRATRGFLTVSGTLAGEHL 192

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V+  HL S           S    L ++Q + LKD +    +  V  ++ GD N     
Sbjct: 193 TVVVCHLPSR-------RASSYYRELGAKQVKALKDSL-LLNDPQVKVLVMGDMNDDPTN 244

Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
              ++      +       +     +           +        D  +M  N      
Sbjct: 245 ESIHECLSAKAEINEVGADDMYNPWYNLLVKEGTGTLQYQGKWNLFDQIIMTPNLLNKDG 304

Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPIS 299
           ++ FS++ + ++ I  R                           SDH P+ 
Sbjct: 305 KKDFSQLKFWKNQIFRRDYLFQETGKYKGNTKRTTAGGVWLDGYSDHLPVV 355


>gi|161524301|ref|YP_001579313.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616]
 gi|221214798|ref|ZP_03587767.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1]
 gi|160341730|gb|ABX14816.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616]
 gi|221165337|gb|EED97814.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1]
          Length = 272

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/300 (9%), Positives = 78/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N+L+                     +  +      D++ LQE          
Sbjct: 15  MKIATWNVNSLN----------------VRKQHVLDWLAQSAVDVLCLQE---------- 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +    L      +           +
Sbjct: 49  LKLPDEKFPRADLEAAGYRSWFAGQKTYNGVAILAR--DTLPFDESDVVRNIPGFEDTQQ 106

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + + ++     + ++  +  +   + S +  Y        Q    L  W+  + +   
Sbjct: 107 RVIAVTID----GVRIVSAYFPNGQAVGSDKFLYK------MQWLDALHAWLRTEMQRYP 156

Query: 204 PFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRF----------PKEKDSRCNANK 249
              + GD+N        +D         + P +                +  +       
Sbjct: 157 KLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHFAKLIELGFVDAFRRFEQPEKTFT 216

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++                    D +    ++ SDH P+  
Sbjct: 217 WWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEV-------DRVPRTWEQPSDHTPVVA 269


>gi|17986352|ref|NP_538986.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
 gi|189025067|ref|YP_001935835.1| Exodeoxyribonuclease III [Brucella abortus S19]
 gi|237816360|ref|ZP_04595353.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A]
 gi|297247235|ref|ZP_06930953.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196]
 gi|17981940|gb|AAL51250.1| exodeoxyribonuclease iii [Brucella melitensis bv. 1 str. 16M]
 gi|189020639|gb|ACD73361.1| Exodeoxyribonuclease III [Brucella abortus S19]
 gi|237788427|gb|EEP62642.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A]
 gi|297174404|gb|EFH33751.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196]
          Length = 289

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 79/309 (25%), Gaps = 68/309 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +    + +WNIN                       L+ Q+ ++   D++ LQE       
Sbjct: 21  SMAFSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP--- 61

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP   +                S    +  +A   +      +        D     
Sbjct: 62  DDLFPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH-- 113

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+
Sbjct: 114 -----LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD 166

Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSR 244
                ++ GD N     N + ++    K +                            + 
Sbjct: 167 -GCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAAD 225

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+     +                         R SD
Sbjct: 226 QKIYTWWSYRAKDWDAADRGRRLDHVWGSADLES-------HNKGLQVLRDARGWDRPSD 278

Query: 295 HCPISIDYD 303
           H P+   +D
Sbjct: 279 HVPVIATFD 287


>gi|194292799|ref|YP_002008706.1| exodeoxyribonuclease iii, ap endonuclease, family 1 [Cupriavidus
           taiwanensis LMG 19424]
 gi|193226703|emb|CAQ72654.1| Exodeoxyribonuclease III, AP endonuclease, family 1 [Cupriavidus
           taiwanensis LMG 19424]
          Length = 270

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 72/305 (23%), Gaps = 70/305 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ ++NIN                   S    L  +      DIV LQE+ + +  
Sbjct: 3   ASTLKIATFNING----------------IRSRVGALCHWLAREAPDIVCLQELKTADE- 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                           R   +            +A+  +    ++    L G  D     
Sbjct: 46  ---------SFPAREIRDAGYGAIWHGQKSWNGVAILARGEEPVEVRRGLPGDPDDSHSR 96

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               AV          + +  ++L +       +  Y  +        + L     +   
Sbjct: 97  YLEAAVS--------GLLIACLYLPNGNPQPGPKFDYKLA------WFERLIAHAQELFG 142

Query: 201 SLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC 245
           S  P V+AGD+N                         D +  +          +      
Sbjct: 143 SGHPVVLAGDYNVVPTDQDIYNPRSWRKDALLQPESRDAYARLLAQGWTDALRQRHPDAP 202

Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                   +          ID+ ++       L            D         SDH P
Sbjct: 203 VYTFWDYFRQHWQTNSGLRIDHILLSAELAPRLRDAGV-------DRWVRGEDHPSDHAP 255

Query: 298 ISIDY 302
             +  
Sbjct: 256 AWVVL 260


>gi|170076537|ref|YP_001733176.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus
           sp. PCC 7002]
 gi|169887399|gb|ACB01107.1| Endonuclease/Exonuclease/phosphatase family [Synechococcus sp. PCC
           7002]
          Length = 1686

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/359 (11%), Positives = 87/359 (24%), Gaps = 77/359 (21%)

Query: 17  TASVAQKVRLVSWNINTLS-----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
              V   +++ S+N+                        ++ +        L      ++
Sbjct: 476 APDVGGSLKVASFNVLNFFTSLGDENLTSGPDGLDPRGADNQEEFDRQVAKLVSALAEIE 535

Query: 66  ADIVFLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSK---RDS 106
           AD+  L E+ +                 +A+  V P   +         +          
Sbjct: 536 ADVFGLVELENEFGDVNGDGEFAIGFLADALNAVIPGANYQYVDPGTDYVGTDAIAVGFI 595

Query: 107 NNDIHTAIAVRKKNVRVLQQSYP----LLGAKDSFSRAGNRRAVELLVE--INGKKIWVL 160
            N     IA       +            G         +R  + +  E    G+    +
Sbjct: 596 YNANTVGIAEGTTVAVLSDSDLAGLGVDPGNPVFDGSGTSRNPIAVTFEELATGETFTAV 655

Query: 161 DIHLK-----SFCFLDSLENTYSPSCSLLSQQAQ-WLKDWITQKK--ESLVPFVIAGDFN 212
           + H K     S    ++     + + +    QA   +  W+           F+I GD N
Sbjct: 656 NNHFKSKGSVSPFGNNAGTGDGTGNNNEARLQAAIAVNAWLDTDPTGSGDSDFLILGDLN 715

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----------KIPIDYFV 261
                        + +     +    K      +                     +DY +
Sbjct: 716 AYGMEDPI-----QYLLDEGYVDTIEKFLPDGESIYSFGFPLDLETSPQVQAFGALDYAL 770

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303
            +++    ++  +   I  +E                         R SDH P+ I  D
Sbjct: 771 ANESLASQVVDAAEWHINADEASAFDYNTNFKPQAQIDGLFGANPFRSSDHDPLIIGLD 829


>gi|290892528|ref|ZP_06555521.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           J2-071]
 gi|290557837|gb|EFD91358.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           J2-071]
          Length = 256

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 75/285 (26%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +   
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMLDMK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + W  F             +    ++      +         P + +  S +    R
Sbjct: 55  AMLD-WDYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAM-FPR 112

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     + +GK+ ++ + HL                       A  L           
Sbjct: 113 ICVWGKFADSDGKQFYLFNTHLDHIS-------------EEARLFASQLLLKKAAIIAEN 159

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259
            P ++ GDFN + N    N    K  D      +  K      +    LR       IDY
Sbjct: 160 SPVIVLGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPTGSFHDFHPLRPENELEKIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +            F    Y     +  G   SDH P++ + D+
Sbjct: 220 IFVSNE---------FQVNTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|315607053|ref|ZP_07882057.1| AP endonuclease domain protein [Prevotella buccae ATCC 33574]
 gi|315251107|gb|EFU31092.1| AP endonuclease domain protein [Prevotella buccae ATCC 33574]
          Length = 365

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 83/300 (27%), Gaps = 68/300 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++S+N+         S               +  Y     ADI+ LQE       A+
Sbjct: 100 TLKVLSFNVQNFGYSVDGSPGDGPNP--------IVSYLARSKADIICLQEANGQVIKAE 151

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +         + +E L + S           + +  +      +        +       
Sbjct: 152 LDSVMGRLYSHHSEELKDSSGDM--------LRLYSRFPIKRVERIHYQSYGNLS----- 198

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL------------------------ENTYS 178
              V  ++++NG+ + V++ HL+S     +                          +  +
Sbjct: 199 ---VAYVLDVNGEDVLVVNNHLESNLLNPTDKAGFKNLVKGELGRHEARQESTHLIDKLA 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            +    + Q   +  ++ +     +P ++ GDFN       +          N     + 
Sbjct: 256 AASRKRAPQVDSVAAYVARHIGR-MPVILCGDFNESPISYAHYRM------ENLLTDCYV 308

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +    +       + ID      N         +       DD        SDH PI
Sbjct: 309 SAGNGPGWSYHRSGMYVRIDNIFCSDN---------WKPYQCRVDDKIKE----SDHYPI 355


>gi|307329665|ref|ZP_07608823.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113]
 gi|306884723|gb|EFN15751.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113]
          Length = 259

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 81/304 (26%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE     +    
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCAESA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y   R + +    +       +A+  K          L G  D       R
Sbjct: 42  -------FPYEPLRELGYEAAVNATGRWNGVALVSKAGLTDVTVG-LPGGPDYDGDQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + +  +++ +   +      Y        +  + L+  +        
Sbjct: 94  A-----IGATCGPVRLWSVYVPNGREIGHPHYDYK------LRWLEALRTAVAGDAAGDR 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GDFN                         +    +         P+         
Sbjct: 143 PFAVLGDFNVAPTDEDVWDRSAFDGLTHVTDLEREALAALREAGLSDVVPRPLKYD-RPF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID  V     +   + +++       D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRELGFPKNRGMRID-LVYGNEVFAKAVGDAY------VDREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D +
Sbjct: 255 VDLE 258


>gi|49474726|ref|YP_032768.1| exodeoxyribonuclease III [Bartonella quintana str. Toulouse]
 gi|49240230|emb|CAF26700.1| Exodeoxyribonuclease III [Bartonella quintana str. Toulouse]
          Length = 269

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 83/309 (26%), Gaps = 72/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
            R+ +WN+N                        + QY     AD++ LQE    +A+   
Sbjct: 3   FRIATWNVN----------------SIRLRLAQVFQYLDLFAADVLCLQETKCPDALFPR 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +                S    +  +A+  +      +       +D      
Sbjct: 47  EAFEAAGYKHII-----------LSGQKSYNGVAIVSRLPFKNVEKRFFCQKQDCRY--- 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               + ++VE  G+ I + + ++ +    D  +   +          + +   I   +E 
Sbjct: 93  ----ISVIVEAYGRNIRIHNFYVPAG--GDVPDADVNEKFRHKLDFLEEMAS-IRANQED 145

Query: 202 LVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRC 245
            +  ++ GD N     + + ++    K +                   +           
Sbjct: 146 DLASLLVGDLNIAPLEDDVWSHQQLLKVVSHTPIETERLQALCCQGGWVDLMRLHFPPPT 205

Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     N   F+   S                + SDH
Sbjct: 206 KIYTWWSYRARDWALADRGRRLDHIWSSPNLAPFVANLSI-------FRDARGWNQPSDH 258

Query: 296 CPISIDYDF 304
            P+   +DF
Sbjct: 259 VPVQTVFDF 267


>gi|88854566|ref|ZP_01129233.1| hypothetical protein A20C1_10119 [marine actinobacterium PHSC20C1]
 gi|88816374|gb|EAR26229.1| hypothetical protein A20C1_10119 [marine actinobacterium PHSC20C1]
          Length = 302

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 76/290 (26%), Gaps = 29/290 (10%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              A  + ++S+NI     +    L   +  +      L+R+        +V +QE    
Sbjct: 35  PVEAPDLHVMSYNIR----RRLPKLLPRNPDQWRHRQPLMRRLLAAEQPALVGVQEALFT 90

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A                 R  N           +         +      P +    S+
Sbjct: 91  QARFVRQALGEHYRSLGYGRERNTGGEGCPIFYDSRRLQVVDWHQSALSDTPNVPGSTSW 150

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  VE +       I    ++                S +   + A  L++ +  
Sbjct: 151 GNRTPRVVVEAIFRDLATGIHFQAVNTHL----------DHRSRTSRLRSADALRNIVQA 200

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD-SRCNANKNLRN--K 254
              +  P ++ GDFN   +    ++     +  +       +         N       +
Sbjct: 201 ---TPHPTIMTGDFNTDADTHPYDELTGHGLLVDTWNTAEERLTQVWGTFPNYGPPKHDR 257

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             ID+ +              + +    +  +  G   SDH P+     F
Sbjct: 258 KRIDWILATP---------GVTAVRAGINVTRYAGGWPSDHAPVQAVVRF 298


>gi|328947089|ref|YP_004364426.1| exodeoxyribonuclease III Xth [Treponema succinifaciens DSM 2489]
 gi|328447413|gb|AEB13129.1| exodeoxyribonuclease III Xth [Treponema succinifaciens DSM 2489]
          Length = 251

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G +                 +   +LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAVMGKNFM---------------EAFGSLDADFFCLQETK-LQAGQIQ 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  F++      +          +  AV  K+  +       +   D+  R    
Sbjct: 45  MELPDYHQFWNYAEKKGY----------SGTAVFTKHEPISASYGIGIAEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                   +     + ++        
Sbjct: 91  -----VITLEYEKFFLVTVYTPN-------SQDELRRLEYRMKWEDDFRAYLKTLALKKG 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                              +  +     F           
Sbjct: 139 -VIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEERGKMTELLSSGFTDSFRHFYPDTAGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++  +    +        +             SDHCP+ 
Sbjct: 198 SWWSYRFHAREKNTGWRIDYFLVSDSIKDKMTGAKIHTEIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +D +F
Sbjct: 247 LDMEF 251


>gi|257069277|ref|YP_003155532.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810]
 gi|256560095|gb|ACU85942.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810]
          Length = 273

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 72/308 (23%), Gaps = 63/308 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              + + N+N L                 +    +  +     AD++ LQE+ +   +  
Sbjct: 2   TFTIATVNVNGLRA---------------AARKGMGDWLAATSADVITLQEVRAPEELLA 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 W I     +L   +          AIAVR     V   +               
Sbjct: 47  GLVGEGWSIAGEASQLKGRAG--------VAIAVRSSREDVDLDAMRCGLPGVEGDSHTG 98

Query: 143 RRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           R           +G+ + V+  ++ S         T   +          +   + Q + 
Sbjct: 99  RWIESDLADPFGDGRTLTVISCYMHSGNTEKPQTMTDKYAF------LDAMMLRLEQLRA 152

Query: 201 SLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR 244
           +     + GD N         +                   +       +          
Sbjct: 153 AGGHVALTGDINIAHTEWDIKNWKGNLKSAGFLPEERAYLDRLTTDAGFVDVHRALHGDG 212

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY +  ++                 D   S   R SDH
Sbjct: 213 PGPYTWWSQRGKAFDNDAGWRIDYQLATEDLAARATSAQV-------DRAPSYDTRWSDH 265

Query: 296 CPISIDYD 303
            P+ I Y 
Sbjct: 266 APLVISYS 273


>gi|315225375|ref|ZP_07867189.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           ochracea F0287]
 gi|314944648|gb|EFS96683.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           ochracea F0287]
          Length = 348

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/348 (11%), Positives = 94/348 (27%), Gaps = 56/348 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVR------LVSWNINTLSE--QEGVSLWKNSVKRTTSD 53
           +++ V  +V F++      AQ+ +      +  +N+  L +   +      +        
Sbjct: 1   MKRIVFLMVSFILMTPYINAQEKKKFAVRTVAFYNVENLFDTINDPHKFDDDRTPEGADR 60

Query: 54  Y---------TLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
           +           + +              DIV L E+ +   V  +        +     
Sbjct: 61  WTSKVYNDHVHKIAKVISEIGSDVTKHAPDIVGLAEIENEAVVRDLINTEYLKRY---NY 117

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
            I H +      +  A+  +K   +      +PL   KD       R  + +  E++G+ 
Sbjct: 118 GIVHYESPDARGVDVALIYKKSVFKPTASFPHPLYLTKDDGKPLYTRDQLLVSGELDGEM 177

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           I  +  H  S    ++         + L++  + +   ++  K+     +  GDFN    
Sbjct: 178 IHFIVNHWPSRLGGEAKSRPSREKAAALNK--KIIDSLLS--KDPNAKVIAMGDFNDDPI 233

Query: 217 YLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
             G  +          +   +                         D F    +  K   
Sbjct: 234 NSGFKNVLKTKDKKEDVKQGELFNPMEAMLKKGMGTLAYQDGWNLFDQFYFTYDLLKEDK 293

Query: 272 QE-------------------SFSEILYNEDDIKSRGKRLSDHCPISI 300
                                 +    +      +     SDH P+ +
Sbjct: 294 SSYRYWKTGIFNRSYLANPKGRYKGYPFRSMSNGNYTWGYSDHFPVYM 341


>gi|163761164|ref|ZP_02168241.1| Endonuclease/exonuclease/phosphatase [Hoeflea phototrophica DFL-43]
 gi|162281715|gb|EDQ32009.1| Endonuclease/exonuclease/phosphatase [Hoeflea phototrophica DFL-43]
          Length = 346

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 92/336 (27%), Gaps = 59/336 (17%)

Query: 26  LVSWNINTLSEQE-----GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + + N+   +               S     +    +      ++AD++ LQE+ S + +
Sbjct: 6   VATLNLYHFAAPGIFWHARKPTATYSQAEWDAKKNWIITLLSEMNADVIGLQEVVSQDEL 65

Query: 81  AKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF-- 137
             +   N +  FY       +    +   +   AIA R   +     S      +D+   
Sbjct: 66  KALLAANGYPYFYCPVAPAFDADDPEIYVNATVAIASRYPFISAEPLSGVAGVPQDTVID 125

Query: 138 -SRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSC------------- 181
                +R  V+ ++++   G+  + +        F+D                       
Sbjct: 126 EDFRFSRTPVDAVIDLPGIGQTRFFVCHFKSQGAFVDDEIIDGLADWGDKIRTTYMERAM 185

Query: 182 ------SLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINY---------------- 217
                 +  + +A  +     Q    ++  P ++ GD N                     
Sbjct: 186 AGVNQVAKRAAEAGAIYRMFRQSIDADADAPVILLGDLNEDPASHTISILTQADRVWSWG 245

Query: 218 -------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA---Y 267
                                D+    P +   R N +  + +   +DY V+        
Sbjct: 246 SVAANGIPDPFAFLKHVYKLYDAFNLVPMQGFVRPNTHGGVGSGSTLDYVVVSNGLNPKN 305

Query: 268 KFLIQESFSEILYNEDDIKS-RGKRLSDHCPISIDY 302
                E     +Y++         R SDH P+    
Sbjct: 306 PRRRGEVAKVEVYDDHFAAGLPKDRSSDHAPVIATI 341


>gi|282879047|ref|ZP_06287807.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281298781|gb|EFA91190.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 362

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 90/307 (29%), Gaps = 71/307 (23%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    ++++S+N+                         +  + K  DADIV LQE  ++
Sbjct: 95  QTPEGAIKVLSYNVWFFGGNGFEHENNP-----------VLNFIKEQDADIVCLQESDAW 143

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              +       +  +         +K D  +               +   +P++  +D  
Sbjct: 144 GKYSDKAKALMYSQYPYHASSHAKNKGDIMD---------------IYSRHPIISQEDIN 188

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------------------- 178
             +    +    + I+G  + V++ HL+S       +  +                    
Sbjct: 189 YPSEGNHSTAFYLNIHGDTVIVINNHLESIGLSPEDKANFKGVVKGNIKGDSAQISTKTL 248

Query: 179 -----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 + S+ + QA  +  +I   ++     ++ GDFN   N         K +     
Sbjct: 249 IKKLGEASSIRAAQADAIAQYIAAHRDKS--VILCGDFNDGPNSYA-RRTIAKQLRD--- 302

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              + +  +    +       + ID+ +  ++                 +       + S
Sbjct: 303 --CYVETANGPGISYHLGGFYVRIDHMMCSKD-------------WTPYNCKVDNKIKAS 347

Query: 294 DHCPISI 300
           DH PI  
Sbjct: 348 DHYPIYC 354


>gi|257470580|ref|ZP_05634670.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185]
 gi|317064786|ref|ZP_07929271.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185]
 gi|313690462|gb|EFS27297.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185]
          Length = 253

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 72/303 (23%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y KN +ADI  +QE          
Sbjct: 1   MKLISWNVNGLRAAVQKGF---------------LDYFKNENADIFCVQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELEGYHQYWNYAEKKGY----------SGTAIFTKKKPIEVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +     +  +               L            
Sbjct: 91  -----VITLEYDDFYMITVYTPNSQEELARLSYRMSWEDEFRNYVMKLDKL--------K 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD N                           +  +  N  +  F         A 
Sbjct: 138 PVIICGDLNVAHQEIDLKNPKSNRKNAGFSDEERAKFTELLKNGFVDSFRHFYPELTGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     +                      SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSERLKDIMEGAEIHNETL-----------GSDHCPVV 246

Query: 300 IDY 302
           +  
Sbjct: 247 LKL 249


>gi|229549148|ref|ZP_04437873.1| exodeoxyribonuclease [Enterococcus faecalis ATCC 29200]
 gi|256957962|ref|ZP_05562133.1| exonuclease III [Enterococcus faecalis DS5]
 gi|257084299|ref|ZP_05578660.1| exonuclease III [Enterococcus faecalis Fly1]
 gi|257090921|ref|ZP_05585282.1| exonuclease III [Enterococcus faecalis CH188]
 gi|307276972|ref|ZP_07558082.1| exodeoxyribonuclease III [Enterococcus faecalis TX2134]
 gi|312902560|ref|ZP_07761766.1| exodeoxyribonuclease III [Enterococcus faecalis TX0635]
 gi|312951910|ref|ZP_07770798.1| exodeoxyribonuclease III [Enterococcus faecalis TX0102]
 gi|229305702|gb|EEN71698.1| exodeoxyribonuclease [Enterococcus faecalis ATCC 29200]
 gi|256948458|gb|EEU65090.1| exonuclease III [Enterococcus faecalis DS5]
 gi|256992329|gb|EEU79631.1| exonuclease III [Enterococcus faecalis Fly1]
 gi|256999733|gb|EEU86253.1| exonuclease III [Enterococcus faecalis CH188]
 gi|306506395|gb|EFM75555.1| exodeoxyribonuclease III [Enterococcus faecalis TX2134]
 gi|310630099|gb|EFQ13382.1| exodeoxyribonuclease III [Enterococcus faecalis TX0102]
 gi|310634230|gb|EFQ17513.1| exodeoxyribonuclease III [Enterococcus faecalis TX0635]
 gi|315035107|gb|EFT47039.1| exodeoxyribonuclease III [Enterococcus faecalis TX0027]
 gi|315154300|gb|EFT98316.1| exodeoxyribonuclease III [Enterococcus faecalis TX0031]
 gi|315159607|gb|EFU03624.1| exodeoxyribonuclease III [Enterococcus faecalis TX0312]
 gi|315579630|gb|EFU91821.1| exodeoxyribonuclease III [Enterococcus faecalis TX0630]
 gi|323481658|gb|ADX81097.1| exodeoxyribonuclease III [Enterococcus faecalis 62]
          Length = 251

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGI-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|256819956|ref|YP_003141235.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM
           7271]
 gi|256581539|gb|ACU92674.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM
           7271]
          Length = 348

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/348 (11%), Positives = 94/348 (27%), Gaps = 56/348 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVR------LVSWNINTLSE--QEGVSLWKNSVKRTTSD 53
           +++ V  +V F++      AQ+ +      +  +N+  L +   +      +        
Sbjct: 1   MKRIVFLMVSFILMTPYINAQEKKKFAVRTVAFYNVENLFDTINDPHKFDDDRTPEGADR 60

Query: 54  Y---------TLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
           +           + +              DIV L E+ +   V  +        +     
Sbjct: 61  WTSKVYNDHVHKIAKVISEIGSDVTKHAPDIVGLAEIENEAVVRDLINTEYLKRY---NY 117

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
            I H +      +  A+  +K   +      +PL   KD       R  + +  E++G+ 
Sbjct: 118 GIVHYESPDARGVDVALIYKKSVFKPTASFPHPLYLTKDDGKPLYTRDQLLVSGELDGEM 177

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           I  +  H  S    ++         + L++  + +   ++  K+     +  GDFN    
Sbjct: 178 IHFIVNHWPSRFGGEAKSRPSREKAAALNK--KIIDSLLS--KDPNAKVIAMGDFNDDPI 233

Query: 217 YLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
             G  +          +   +                         D F    +  K   
Sbjct: 234 NSGFKNVLKTKDKKEDVKQGELFNPMEAMLKKGMGTLAYQDGWNLFDQFYFTYDLLKEDK 293

Query: 272 QE-------------------SFSEILYNEDDIKSRGKRLSDHCPISI 300
                                 +    +      +     SDH P+ +
Sbjct: 294 SSYRYWKTGIFNRSYLANPKGRYKGYPFRSMSNGNYTWGYSDHFPVYM 341


>gi|330969502|gb|EGH69568.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 380

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 92/342 (26%), Gaps = 75/342 (21%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C  +V        Q +++++WNI  L+                  + + +    +
Sbjct: 52  LLTASCNPAVEAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYN 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   V  ++P +T   ++  E + 
Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYEDQLALIKERVTDLYPCSTQAFYWKAEFVP 171

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157
           N     S          R       +   P+  A     +   + A+ +      +G K+
Sbjct: 172 NPHIWGSVGRKLVT-LSRFHIDSAERLQLPVPDANIISRQFQPKDALLVSYLPLRDGGKL 230

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V++  L           T   +     +Q    +  + + +    P++I GDFN     
Sbjct: 231 AVINTSLT----------TARHAGDTAQKQVAATETQLDKLESGGTPWLIGGDFNLLPLG 280

Query: 218 LGNNDDFWKTIDPNDSLIR-------------FPKEKDSRCNANKNLRNKIPI------- 257
                   + +                            R     +  N   I       
Sbjct: 281 QYQRLPEQQRLGYAADSELHQLWDKYPMIPNNAESSGIDRSKWLTHFPNDSRINGPDRTV 340

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           DY     +  +     S      +          +SDH P+ 
Sbjct: 341 DYLFYSPSLKR----VSARVRRDDTLL-------ISDHLPVI 371


>gi|217965584|ref|YP_002351262.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes HCC23]
 gi|217334854|gb|ACK40648.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes HCC23]
 gi|307569865|emb|CAR83044.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes L99]
          Length = 256

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 74/285 (25%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +   
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMLDMK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + W  F             +    ++      +         P + +  S +    R
Sbjct: 55  AMLD-WDYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAM-FPR 112

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     + +GK+ ++ + HL                       A  L           
Sbjct: 113 ICVWGKFADSDGKQFYLFNTHLDHIS-------------EEARLFASQLLLKKAAIIAEN 159

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCNANKNLRNKIPIDY 259
            P ++ GDFN + N    N    K  D      +  K         +  +       IDY
Sbjct: 160 SPVIVLGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPTGCFHDFHPLRPENELEKIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +            F    Y     +  G   SDH P++ + D+
Sbjct: 220 IFVSNE---------FQVNTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|91763300|ref|ZP_01265264.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717713|gb|EAS84364.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1002]
          Length = 258

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 91/300 (30%), Gaps = 68/300 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWN+N                   +    +++Y +    ++V +QE+ + +       
Sbjct: 3   ITSWNVN----------------SVRARIENIKEYLQKFSPNVVMMQEIKTQDE------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                  Y     +++         +  +A+  K+ ++      L+  K   SR      
Sbjct: 41  ----TFPYDDFSALDYESHVFGQKSYNGVAIISKH-KLENVRIDLIKDKLKQSR-----I 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   ++   K + +++I+  +   +D+ + TY             L   +    +     
Sbjct: 91  ISAELKHKKKNVQLINIYTPNGNPVDTDKYTYKKD------WLDKLIKQLKTLSKKNENI 144

Query: 206 VIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           ++AGDFN   +                       ++ +        +      +      
Sbjct: 145 ILAGDFNILPSAEDAYNIKGFEDDALYRLEIRKKFREMINLGFHDAYRHIHGEKEGYTYW 204

Query: 251 LRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +          ID+F++  +    +   +        +      ++ SDH PI I+ 
Sbjct: 205 DYMRGAWQKNNGLRIDHFLVSNSLLNIVKNVNI-------NKDPRGKEKPSDHTPIEIEL 257


>gi|221107207|ref|XP_002170688.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 495

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 93/309 (30%), Gaps = 27/309 (8%)

Query: 22  QKVRLVSWNINTLSEQEGV-------SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            K+R++++NI      +                 + +    LL +     +ADI+ LQE 
Sbjct: 187 DKLRIITYNILADVFCDSEYASEVLYPYCPKYALKLSYRMNLLIKELIGFNADILCLQEC 246

Query: 75  GS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                   +  V     +  + + +                     K     ++++  L 
Sbjct: 247 ELKMFQVYLKPVLQIYNYEGYLNLKTGKMPEGEAIFIR-KNKFIYLKDFSISVKEALHLE 305

Query: 132 GAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQ 187
             KD  +   N    +LL + +   +I +L  +  +    C  ++       +  +   Q
Sbjct: 306 CNKDILAAIQNNDIFDLLCKKSSIAQIHILAENKTNGRHLCIFNTHLYFKPGAQLIRVLQ 365

Query: 188 AQWLKDWITQKKESLVP---FVIAGDFNRKINYL-----GNNDDFWKTIDPNDSLIR--- 236
              L +++ +  +        ++ GD+N K                K +   D +++   
Sbjct: 366 IAVLLNYVEKVLKEHQTKCSLIMCGDYNSKKGDPLLQFLNEKSYSLKLLYNLDYVLQCPF 425

Query: 237 -FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                           + +  +DY  +D++                           SDH
Sbjct: 426 QLENVTGFPLFTVFVPQFRETLDYIFVDESFTLEGFVPIPLAEELEVFCALPSVVSPSDH 485

Query: 296 CPISIDYDF 304
            P+ +D ++
Sbjct: 486 IPLIVDLNW 494


>gi|320104208|ref|YP_004179799.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
 gi|319751490|gb|ADV63250.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
          Length = 271

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 75/284 (26%), Gaps = 28/284 (9%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+      +G + W N           ++Q   + D D+V LQE  +       
Sbjct: 9   LKVLTFNLRYADAADGPNAWPN-------RREAVKQVLIDHDPDLVLLQEALAVQVETVC 61

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--KDSFSRAG 141
                     S               I       +          P        S+    
Sbjct: 62  EALPGHLAVGSGRNDGRDDGEFVPILIRARRFRLETARTFWLSDTPDQPGSISRSWGNHL 121

Query: 142 NRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R  VE+ +   + G++  V ++HL          ++       L      L        
Sbjct: 122 PRIGVEVRLVDRLGGRRWVVGNLHL--------DHDSAEARRRGLDLAVDRLTAAAVASG 173

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +  V  ++ GDFN             +      +            +          ID+
Sbjct: 174 DPRVLLLMGGDFNAPTEDNTLRRHLGEGFIDLVTAADPSLAAVGTRHDFLGQGGP-RIDH 232

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +            F+ I    D      +  SDH P+    +
Sbjct: 233 LWLRGG--------EFTPIAAGIDTRPMLERMPSDHHPVWAVVE 268


>gi|209966133|ref|YP_002299048.1| endonuclease [Rhodospirillum centenum SW]
 gi|209959599|gb|ACJ00236.1| endonuclease [Rhodospirillum centenum SW]
          Length = 287

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 81/285 (28%), Gaps = 53/285 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                  ++ + +WNI++    +                       + LDAD+V LQE+G
Sbjct: 30  SVPPGYGRLCVATWNIHSCVGMDARFAP-----------ERTACVIRGLDADVVGLQEVG 78

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            ++       +  +    +  R +    + +    H   A+  +   +      L     
Sbjct: 79  WHHRGEMGVDQFAFLEAATGYRALAGPTKHNRAA-HYGNALLTRRPVLEVAPLDL----- 132

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +      R  +  +++++G ++ V+  HL    +               + Q   +  ++
Sbjct: 133 AMPMREPRGGLCAVLDLDGVEVQVIVAHLGLDPW-------------ERNAQVTRILSFL 179

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                   P V  GD N               +         P+       +       +
Sbjct: 180 D--ARPPRPTVFMGDLNEW----RPKAPRLARLSERLPDCAAPR-------SFHARLPTL 226

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +D   +               +   E    +  +R SDH P+  
Sbjct: 227 RLDRIFVSPTL----------HLASFEVVRSAMTRRASDHLPVRA 261


>gi|296535508|ref|ZP_06897694.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957]
 gi|296264163|gb|EFH10602.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957]
          Length = 255

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 79/303 (26%), Gaps = 71/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL S+N+N                        LR++ +N   D++FLQE          
Sbjct: 1   MRLASFNVN----------------SVRKRVPHLRRFLENAQPDLLFLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               T          + ++            +AV  +    +       G  D+ +R   
Sbjct: 35  LKCKTEEFPAGEFTDLGYTSHAVGQQGGRNGVAVLGRVPYEVVAEELPGGDGDTHAR--- 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                + V   G       I+L +     +    Y           + L+     + ++ 
Sbjct: 92  ----YVEVTAEGASF--AGIYLPNGNSGGAEGYAYK------LGWMRRLRALAQARLDAF 139

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P+ I GDFN                           ++ +                   
Sbjct: 140 TPYAILGDFNVCPTELDLAPGALPPTDALVRPETRAEFRALANLGLTDALRALHPGERLY 199

Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+ ++     + L +          D      ++ SDH P+ +
Sbjct: 200 TYWDYGPAFEGNRGLRIDHAMLSPELAERLARAWV-------DTAPRSQEQPSDHTPLLV 252

Query: 301 DYD 303
           + +
Sbjct: 253 ELE 255


>gi|291618627|ref|YP_003521369.1| Hypothetical Protein PANA_3074 [Pantoea ananatis LMG 20103]
 gi|291153657|gb|ADD78241.1| Hypothetical Protein PANA_3074 [Pantoea ananatis LMG 20103]
          Length = 371

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 74/259 (28%), Gaps = 23/259 (8%)

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            Q   +L ADI+ + E  S  A+ +           +    +     +    I   +   
Sbjct: 120 AQVMIDLKADILTVVEAESRPALLEFNNAMLPARQGTPFDHVMVIDGNDERGIDVGLMTG 179

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                   +S+     K              +   +G+ + VL  H KS           
Sbjct: 180 AGFAIDTIRSHVDDKDKQGDLIFSRDCPEFAIPLPDGQTLHVLVNHFKSK-----GYGAK 234

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           + S +    QA+ +K    Q+ +     + I GDFN   +     +     +   D    
Sbjct: 235 TFSDARRKLQAERVKAIYQQRIKEGQTLIAITGDFNDTPDS----EALAPLLKETDLKDI 290

Query: 237 FPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFS----------EILYNED 283
           F  EK                  IDY ++    +K + +                     
Sbjct: 291 FTHEKFDNGGYPGTWGGCSASNKIDYILLSPALWKKVEKGGVWRKGMWPGVRPVKWETYP 350

Query: 284 DIKSRGKRLSDHCPISIDY 302
           ++K      SDH  + +D 
Sbjct: 351 ELKKEVNAASDHAAVWVDL 369


>gi|17232798|ref|NP_489346.1| exodeoxyribonuclease III [Nostoc sp. PCC 7120]
 gi|17134445|dbj|BAB77005.1| exodeoxyribonuclease III [Nostoc sp. PCC 7120]
          Length = 260

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 83/305 (27%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  + K    D++ LQE    +     
Sbjct: 1   MKIATWNVN----------------SIRTRLEQVLDWLKQNPVDVLCLQETKVIDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAKDSFSRAG 141
                     S    + +    S    +  +A+  +       +   P+L   +      
Sbjct: 41  ------DFPRSPFENLGYHSYISGQKAYNGVALISQQPLTDVTTGFTPILPDIEPIWDEQ 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R    ++       + ++++++ +   + S +  Y        +    L++++      
Sbjct: 95  KRVITGVI-----DGVRIVNLYVPNGSAIASEKYEYK------LRWLTVLREYLRSLLLL 143

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                I GDFN  +     +                   + +        F K      +
Sbjct: 144 QPAICICGDFNIALEDKDIHEKVKAENHIMASLAERQALRDVLELGFADAFRKFTTEGGH 203

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  +    Y      +        D    +  + SDH P
Sbjct: 204 -FSWWDYRAASFRRNQGWRIDHHYLTPVLYAQAKSCTI-------DVSPRKLTQPSDHTP 255

Query: 298 ISIDY 302
           + ++ 
Sbjct: 256 VIVEI 260


>gi|158317046|ref|YP_001509554.1| exodeoxyribonuclease III Xth [Frankia sp. EAN1pec]
 gi|158112451|gb|ABW14648.1| exodeoxyribonuclease III Xth [Frankia sp. EAN1pec]
          Length = 297

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 74/303 (24%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   +    L ++      D+V LQE        K+
Sbjct: 1   MRIATWNIN----------------SAKARQPRLIEWLDRASPDVVCLQE-------TKL 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +    +F        +      +     +A+  +      +    L     F     R
Sbjct: 38  SDEAFLELFDEDLFRRGYRVAHHGDGRWNGVAILSRAGLEDVRRG--LPGDPGFPGPEPR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   I +  +++ +   ++     Y  +          L+D + +      
Sbjct: 96  A-----ISASCGGIRIWSLYVPNGRTVEDPHYAYKLA------WLAALRDVVAELAPQG- 143

Query: 204 PFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                              +     L    +         
Sbjct: 144 PVMTLGDFNIAPTDADVWDIAEFEGATHVTEAERAALGRLHDAGLLDLMRERWPDETVYT 203

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + ID               +        D    +G   SDH P+ +
Sbjct: 204 YWDYRQLCFPKNYGMRID-------LTLATADVAARARAVWVDRAARKGTGTSDHAPVVV 256

Query: 301 DYD 303
           D D
Sbjct: 257 DLD 259


>gi|320538511|ref|ZP_08038372.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           phagedenis F0421]
 gi|320144618|gb|EFW36373.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           phagedenis F0421]
          Length = 353

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 100/341 (29%), Gaps = 62/341 (18%)

Query: 5   YVLALVFFLVPCTA-------SVAQKVRLVSWNINTLSEQEGVSLWKN---------SVK 48
           ++  +    + C+           + + LVS+N  T  +        N         S +
Sbjct: 25  FLFFIPISCIGCSTVFGFSSWESPKTLSLVSYNTQTFFDAIEDGQEFNGFKGSKSRWSPE 84

Query: 49  RTTSDYTLLRQYAK----------NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           R       LR+             N   DI+ LQE+     +     + +    Y+   +
Sbjct: 85  RYKVRLNRLREALMIATEALTGDINSLPDILILQEIEGERVINDFCRQLSRKESYNYAVI 144

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK--- 155
               K  +        A+  K   +    + L   K+S      R   E+ + I  +   
Sbjct: 145 TPIEKNAAFT-----TALLSKLPILDVFIHRLHTEKES-----VRPLCEVWINIGSEEYP 194

Query: 156 -KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFN 212
             + V   H KS    ++          +   Q + +   I + K+    + +VI GDFN
Sbjct: 195 EPLVVFSTHWKSKLGKNT--------AEIRRMQEKQVFQKIQELKKTNPDIHYVICGDFN 246

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF--- 269
           + +       +   + +  + L            +     N   ID+    +N       
Sbjct: 247 QPLEEFDLLTELPNSWNRCEYLRALSVNAQPG-GSFCYKGNWQAIDHIFYSENLSDNKGL 305

Query: 270 --------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    I    +            GK  SDH PI +  
Sbjct: 306 DIEHFAVIAIPPLITSAGKPNAYSVFSGKGYSDHLPIGVRL 346


>gi|313625229|gb|EFR95070.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           innocua FSL J1-023]
          Length = 256

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 74/285 (25%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +  +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKGWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++A     +         P + +  S +    R
Sbjct: 54  KEMLDWDYFGVGRDDGIEKGEFTAVFYNSARFNLLQEGHFWLSETPDVPSIHSTAM-FPR 112

Query: 144 RAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V   +  + GK+ ++ + HL                       A  L           
Sbjct: 113 ICVWGKLADSVGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAAIIAGD 159

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259
            P +I GDFN   N    N    K  D         K      +  + LR       IDY
Sbjct: 160 SPVIILGDFNTAPNTTTYNYITKKYRDAQLISQTPIKGPIGSFHDFQPLRPENELEKIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             + +               Y     +  G   SDH P++   ++
Sbjct: 220 IFVSKEL---------RVCSYKTITDQVDGCSASDHFPVTATLEW 255


>gi|296139981|ref|YP_003647224.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
 gi|296028115|gb|ADG78885.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
          Length = 291

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/318 (11%), Positives = 73/318 (22%), Gaps = 71/318 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++N+N +                         +     ADIV LQE+         
Sbjct: 1   MTVATFNVNGIRAARRRGFD---------------SWLAGRGADIVALQELRCPPDAVGD 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F       +++     +             +A+  +      +S+     +    R    
Sbjct: 46  FAG-----YHAAIDCGSIPG-------RNGVAILTREPAAAVRSWAEHPPRARGLREYAH 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQAQWL 191
               +  ++    + V  ++L                        Y      L+  A+ L
Sbjct: 94  EGRYIEADLAEAPLTVACLYLPKGGLPAHLQRPGTLRDVPDGGAKYQRKMRFLAAFAREL 153

Query: 192 KDWITQKKESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLI 235
                        F++ GD N                               + P   + 
Sbjct: 154 DRNRRAAHARGREFLLLGDLNLAHLPHDVTNWRPAQKMEGFLPEERAWLDARLGPRTLVD 213

Query: 236 RFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
              +    R                     ID+ +         +           D   
Sbjct: 214 VVRRLHGDRPGPLSWWSWAGASFTKNVGWRIDHHLASPGLAATAVSV-------VVDKEA 266

Query: 287 SRGKRLSDHCPISIDYDF 304
               RLSDH P+ +DY F
Sbjct: 267 RADARLSDHAPVVVDYAF 284


>gi|282877908|ref|ZP_06286717.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281299909|gb|EFA92269.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 228

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 70/280 (25%), Gaps = 60/280 (21%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N+                    +    L  + K    D V LQE+       +   +
Sbjct: 1   MTYNLRFG---------------ELASLEELAYHIKAFKPDFVALQEVDCNTHRERAPKQ 45

Query: 87  NTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           N         Y T     + K    +  +  I +  +   +  +   L        ++  
Sbjct: 46  NGKNFISELAYHTGMFGLYGKTIDYSGGYYGIGMLARYPCIDMKKVMLPNPS----KSEQ 101

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +    E+    +     HL                     +QA+++   + +     
Sbjct: 102 RAVMYATYEVGTDTLVFAVTHLDISGKD------------ARKEQAEFIVQELQKC---N 146

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P +I GDFN             K       +               +   KI IDY   
Sbjct: 147 YPVLIGGDFNAGPTEPAIEKVMDKWGRNMTIMD----------QTYSSTTPKIKIDYIYA 196

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +                     LSDH PI  + 
Sbjct: 197 YPKNRWEVKTSQTVR------------SYLSDHFPIVSEI 224


>gi|254389480|ref|ZP_05004707.1| exonuclease [Streptomyces clavuligerus ATCC 27064]
 gi|326444199|ref|ZP_08218933.1| exodeoxyribonuclease III [Streptomyces clavuligerus ATCC 27064]
 gi|197703194|gb|EDY49006.1| exonuclease [Streptomyces clavuligerus ATCC 27064]
          Length = 259

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 74/304 (24%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE          
Sbjct: 1   MRIATWNVN----------------SVTARLPRLLAWLESSGTDVLCIQETKCAEE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R I +      +     +A+  +          L G          R
Sbjct: 41  ------QFPAEELREIGYESAIHADGRWNGVALVSRVGLDEVVKG-LPGGPAYDGAQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + +  +++ +   +      Y        +    LK+ +        
Sbjct: 94  A-----ISATCGPVRLWSVYVPNGREVTHDHYAYK------LEWLAALKEAVAADAAGPR 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N                              +         P+      +  
Sbjct: 143 PFAVLGDYNIAPADEDVWDRAAFEGSTHVTEPERAALAALRETGLSDVVPRPLKYD-HPF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +      +            D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLCFPKNRGMRIDLVYGNGPFAGAVKDSYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|315299279|gb|EFU58531.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 16-3]
          Length = 253

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHL 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|298493134|ref|YP_003723311.1| exodeoxyribonuclease III ['Nostoc azollae' 0708]
 gi|298235052|gb|ADI66188.1| exodeoxyribonuclease III ['Nostoc azollae' 0708]
          Length = 260

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  +      D++ LQE        KV
Sbjct: 1   MKIATWNVN----------------SIRTRLEQVINWLSESPVDVLCLQE-------TKV 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K+   I +       +       +   A+  R+    V      +L   +       R
Sbjct: 38  VDKDFPLISFENVGYHPYIYGQKAYNG-VALISRQPLENVSMGFCAILPELEPQWDEQKR 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++       + +++ ++ +   + S +  Y             L+ ++     S  
Sbjct: 97  VITGVI-----DGVRIVNTYVPNGSAVGSEKYEYK------LGWLTVLRKYLQVLLLSDP 145

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GDFN  +  +  +D                  + I        F K  +   N  
Sbjct: 146 AISMCGDFNIALEDIDIHDKVKIEDHIMASERERQALRDILSLGFADAFRKFNNEGGN-Y 204

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+  +                    D    + ++ SDH P+ 
Sbjct: 205 SWWDYRTAAFRRNLGWRIDHHYVTPVLCARAQSCII-------DVAPRKLEQPSDHTPVV 257

Query: 300 IDY 302
           +++
Sbjct: 258 VEF 260


>gi|149202233|ref|ZP_01879206.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           sp. TM1035]
 gi|149144331|gb|EDM32362.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           sp. TM1035]
          Length = 341

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/340 (12%), Positives = 93/340 (27%), Gaps = 60/340 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQEMG 75
           +R+ ++N+   +         +   + ++            L      LDAD V + E  
Sbjct: 1   MRIATYNVEWFNALFDDQGQPHDDGKWSARYNVTRRDQLAALGIVFTALDADAVLVVEAP 60

Query: 76  SYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126
             N           +                ++     A+      +             
Sbjct: 61  DDNGRRSTVKALESFAKLMQLRARRALIGFANDTQQELALLYDPDVLTARHDPQGATTAG 120

Query: 127 -----------SYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174
                         L     +     ++  +E+ +  I+G+   ++  HLKS     ++ 
Sbjct: 121 GDMPPRFDGVFRIDLDIDDRADRVEFSKPPLEVELTTISGRVTRLIGAHLKSKAPHGAVG 180

Query: 175 NTYSP-----SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------- 221
              +      +      QA WL+  I     +    ++ GD N                 
Sbjct: 181 RDEAIRIGITNRRKQLAQAVWLRQRIEAHLATDDSLIVLGDLNDGPGLDEYEHLFGRSSV 240

Query: 222 --------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYK 268
                   D      DP+       +      +A   LR++       +DY ++  +   
Sbjct: 241 EIIMGEGQDAAAALYDPHARGALLQRFGVVHTSARFYLRDQRRYMQALLDYILISPDLMA 300

Query: 269 FLIQESFSE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303
                         + ++  +++      SDH P+S+D +
Sbjct: 301 RRPVWRIWHPFDDPVCWDNKELRDALLMASDHFPVSLDLE 340


>gi|282865502|ref|ZP_06274553.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE]
 gi|282559546|gb|EFB65097.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE]
          Length = 271

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 79/307 (25%), Gaps = 65/307 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + S N+N L                        ++    +AD+V LQE+         
Sbjct: 2   LTVTSVNVNGLRAAAKKGF---------------VEWLAQSEADVVCLQEVRAEPQQLPE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     W   ++       +                      +      G     S   
Sbjct: 47  EVREPEGWHTVHAPAAAKGRAGVSLYTRQAP-----------ERVQIGFGGFDVPGSEEF 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +     + V++ G  + V  ++L S       ++      +      + LK    +   +
Sbjct: 96  DTGGRYVEVDLPG--VTVASLYLPSGDVGTERQDEKERFMAAFLPYLEGLK---VRAAAA 150

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                             +  +    +         + 
Sbjct: 151 GREVLVCGDWNIAHREADLKNWKANKKNSGFLPEERAWLTRVFEEAAYVDVVRALHPDQE 210

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY V  +      ++          +   + G+R SDH 
Sbjct: 211 GPYSWWSYRGRAFDNDAGWRIDYQVATEGLAARAVKAWV-------ERAATHGERWSDHA 263

Query: 297 PISIDYD 303
           P+++ Y+
Sbjct: 264 PVTVTYE 270


>gi|289705979|ref|ZP_06502353.1| putative exodeoxyribonuclease III [Micrococcus luteus SK58]
 gi|289557316|gb|EFD50633.1| putative exodeoxyribonuclease III [Micrococcus luteus SK58]
          Length = 308

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 80/315 (25%), Gaps = 59/315 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                    VR+ + N+N +                      +R++      D++ LQE+
Sbjct: 28  AGAPKADGAVRVATVNVNGIRAS---------------HRKGMREWFAGRGVDVLTLQEV 72

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               A A V  +    I       ++ +   +       +A+  +      ++   +   
Sbjct: 73  ---RAPADVTAQLVREIVGEDWDEVHLADAVAAAKGRAGVAIASRFPLGEVRTG--IADA 127

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D +     R     L   +G  + V+  ++ S       +                +   
Sbjct: 128 DGYFDDAGRWIEADLRLPDGSPLTVVSAYVHSGEVDTPKQVDKYR-------FLDEMVRR 180

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
           +++        ++ GD N     L   +                 F +            
Sbjct: 181 LSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKAGFLPEERAYFDRFFGELGFTDVHR 240

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                          +           IDY +      +              D   S G
Sbjct: 241 ALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATAGLAERAT-------TAVVDRAPSWG 293

Query: 290 KRLSDHCPISIDYDF 304
            R SDH P+ +DY F
Sbjct: 294 TRFSDHAPLVVDYQF 308


>gi|295691527|ref|YP_003595220.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
 gi|295433430|gb|ADG12602.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
          Length = 319

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 81/321 (25%), Gaps = 37/321 (11%)

Query: 8   ALVFFLVPCTASVAQKV-----RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           A +   +    + A+ +      ++++N+  L         K            +R    
Sbjct: 4   AFLLASLTLAPARAETLPPVTFSVMTYNVEGLPWPVRTGRGKALKAIGRE-LAAMRA--A 60

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-------------------K 103
               D+V +QE         +  ++ +                                 
Sbjct: 61  GRQPDVVLIQEGFRSEIWD-LIDESGYDYVARGPNKGQRDPNMLKGQKTDFRRVKYRRKG 119

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                   + + V   +     +S+             N+ A+ + +E+ G    V    
Sbjct: 120 EGLGKWGSSGLWVLSDHPINWVKSHAYHYCA-GLDCLANKGAMLVSLEVAGLPTPVEIAD 178

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
                   S       +      QA  LK ++ + +    P ++ GDFN   +    N  
Sbjct: 179 THLNSKGASGVPRRR-ATQAHRLQADELKRFMQEDRTPGAPLIVGGDFNVMHSPERFNHV 237

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                    S     +        + +      +D     Q+   FL  E  +      +
Sbjct: 238 MADYPFEVVSRWCHHRPGACDTQISYDGDAPW-LD----TQDLIGFLDGEQVTVTPVAVE 292

Query: 284 DIKSRGKRL--SDHCPISIDY 302
                      SDH    + +
Sbjct: 293 ATFDGASEPVLSDHDGYKVTF 313


>gi|16331188|ref|NP_441916.1| exodeoxyribonuclease III [Synechocystis sp. PCC 6803]
 gi|1653682|dbj|BAA18594.1| exodeoxyribonuclease III [Synechocystis sp. PCC 6803]
          Length = 275

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 92/320 (28%), Gaps = 74/320 (23%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           L F   P        + + SWN+N                   S    +  +      D+
Sbjct: 4   LFFLGFP--------MDIASWNVN----------------SVRSRQQHILDWLGTNPVDV 39

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + LQE        KV  ++             +    S    +  +A+  +      +  
Sbjct: 40  LCLQE-------TKVVDEDFPR---QPFEEAGYHCHISGQKSYNGVAIFSREPLQDVK-- 87

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               A    +  G+    + ++      + ++++++ +   LDS +  Y        +  
Sbjct: 88  IGFAALVEPALTGDLDEQKRVISGVYDGVRIVNLYVPNGSALDSEKYLYK------LRWL 141

Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKT---------------IDPND 232
             L+ ++ Q + S  P F++ GDFN        +D   +                +    
Sbjct: 142 NLLQTYLEQLRRSDTPEFLVCGDFNIAPEDRDIHDPVGRENHIMATAMEREALTEVLAIA 201

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
           +L    ++             +           ID+  +    Y    +          D
Sbjct: 202 NLQDAFRKFTEETGHYSWWDYRTRGFSRNRGWRIDHHYLTPQLYDQAQKCWI-------D 254

Query: 284 DIKSRGKRLSDHCPISIDYD 303
                 ++ SDH P+ +  +
Sbjct: 255 REPRGWEKPSDHAPVVVTIN 274


>gi|333031155|ref|ZP_08459216.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
 gi|332741752|gb|EGJ72234.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
          Length = 276

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 80/286 (27%), Gaps = 53/286 (18%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              +  +R+V++N+        V  + N           + +  K LDAD++  QE+   
Sbjct: 41  PKESGDIRIVTYNVRHFENSSQVIEYNN-----------VAKLIKKLDADVICFQEIDKN 89

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              +K   +       +       S             +  K   +      L G     
Sbjct: 90  TTRSKKKDQMNEIAKLTHMYDYF-SMSIPYQGGEYGNGILSKEKALSFHKIALPG----- 143

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A+ +  +    K  V+  HL               S ++LS +A         
Sbjct: 144 --KELRSALVVEFD----KYIVISTHLSL------ESYNREESINILSNEAA-------- 183

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            K       +AGD N K           K          +   + S  N       K  I
Sbjct: 184 -KYKGKSIYLAGDLNEKKLDTPFFLKLKK----------YWNIESSNKNTYPTPTAKERI 232

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           DY +  +     L        +   +        +SDH P+  D+ 
Sbjct: 233 DYIISYKGESSNLTGTDVVRKMKEVNVSS-----ISDHYPVFCDFS 273


>gi|90421064|ref|ZP_01228967.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
 gi|90334699|gb|EAS48476.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
          Length = 268

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 72/309 (23%), Gaps = 72/309 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
              + +WNIN                       L+++  +    DI+ LQE    +    
Sbjct: 2   PFTIATWNIN----------------SVRLRMPLVQRLLEERKPDILCLQETKCPNDQFP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K F    +                     +  +A   K               D+    
Sbjct: 46  EKAFKALGYEHIA-----------IHGQKGYHGVATVSKQPFDDIVRQDFCQIGDARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +   + I G+++ V + ++ +    D      +          + ++  I+ + E
Sbjct: 93  -----LSTRLSIGGRRLRVHNFYVPAG--GDEPNPEVNVKFKHKLDFIEEMR-LISAEAE 144

Query: 201 SLVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSR 244
             V  ++ GD N                             +                  
Sbjct: 145 PGVSSLLVGDLNIAPFETDVWSHKQLLKVVSHTPIECEGLLRAQADGRWTDLMRHHVPMD 204

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+    Q+    L          +        +R SD
Sbjct: 205 EQLFTWWSYRSKDWAASNRGRRLDHIWGSQDLAPALTA-------IDVMSAARSWERPSD 257

Query: 295 HCPISIDYD 303
           H P+   +D
Sbjct: 258 HVPVLASFD 266


>gi|225631175|ref|ZP_03787879.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591132|gb|EEH12310.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 259

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 72/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                        L  +  +   DI+ LQE+         
Sbjct: 2   LKIATWNVN----------------SIRKRVNQLCSFIVDSQIDIILLQEIKCMEE---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y+    + +            + V  K   + +    ++            
Sbjct: 42  ------QFPYAEIEKLGYECAVYGQVARNGVCVLSKYPILEKFKIDIVEGYQEARY---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +++ N +K+ V  +++ +    DS       +     +    L + ++   ++  
Sbjct: 92  --IECIIKHNNQKVRVGSVYVPNGQSPDS------QAFEYKLKFFDNLYERMSTLLKNEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFPKEKDSRCNA 247
             +IAGD+N   + +   D     ++                 N       +        
Sbjct: 144 LTIIAGDYNVAPDEIDVFD--SNLLNGQVCFHIREREKLRAILNLGFKDAFRISHPNLQQ 201

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + IDY ++   A   L            DD   + +  SDH P+
Sbjct: 202 FTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYI-------DDRLRKLENPSDHTPV 254

Query: 299 SIDYD 303
               +
Sbjct: 255 VCAIE 259


>gi|156934720|ref|YP_001438636.1| hypothetical protein ESA_02555 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532974|gb|ABU77800.1| hypothetical protein ESA_02555 [Cronobacter sakazakii ATCC BAA-894]
          Length = 253

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 80/282 (28%), Gaps = 46/282 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---- 83
           S+N+ T++  +G + +             LR   + + ADIV LQE+   + V  +    
Sbjct: 9   SFNVLTINTHKGFTAFNRRF-----ILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVEN 63

Query: 84  FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +P  T   F +     +++        + H   AV  +                S     
Sbjct: 64  WPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVSVPGTE 118

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +   +   G    +  I +                 +    Q   L + +      
Sbjct: 119 KRGVLHCRITPPGFPKAIHVICVHLGL-----------KEAHRQAQLTMLAELVNS-LPE 166

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKIPIDYF 260
             P V+AGDFN             + +     L   F +               + +D  
Sbjct: 167 GEPVVVAGDFNDW------RQQANRILRNEAGLDEVFTRAHGRPARTFPVSFPLLRLDRI 220

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +   +                       + LSDH P++++ 
Sbjct: 221 YVKNASAS-----------APTALPLRNWRHLSDHAPLAVEI 251


>gi|163800520|ref|ZP_02194421.1| hypothetical protein 1103602000595_AND4_07554 [Vibrio sp. AND4]
 gi|159175963|gb|EDP60757.1| hypothetical protein AND4_07554 [Vibrio sp. AND4]
          Length = 321

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 99/314 (31%), Gaps = 30/314 (9%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           S   ++   + N+       G         S        T  +   + L  DI+ LQE+ 
Sbjct: 6   STENRITFATANLLNFVAPPGAYYDFENIYSFDDWQDKLTWTKSQFEQLSPDIIGLQEVF 65

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLG 132
           S       F +  + +++++    +       +    A+A R     V   ++    L  
Sbjct: 66  SIQETKDFFAEIGY-LYFASVDTPHIEGDYIYSRPVVALASRFPIEHVEAVTFEQNTLDV 124

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSL-------ENTYSPSCSLL 184
                +   +R+ +   +         V  +HLKS    DS              S    
Sbjct: 125 FGSMSAPPFSRKPLRAHIIHPIIGHIAVYVMHLKSQRPADSDKPEDASKPIARWLSTQQR 184

Query: 185 SQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--- 240
             +A  L+D +  Q   + +P ++ GD N+ I     N+   +    + + ++       
Sbjct: 185 GWEAAMLRDAMQKQYALNPMPTLLMGDMNQTITPTSVNNVLVEPYGDSVTDLQLTDGWKL 244

Query: 241 -----KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRG 289
                 DSR   +        +DY ++ Q               Y   D        +R 
Sbjct: 245 QVAPSLDSRPATHYYFAKGNVLDYILLSQEFDAHADVSIAEVTDYQVLDTHLINPSFARD 304

Query: 290 KRLSDHCPISIDYD 303
           K  SDH  +++  +
Sbjct: 305 KNASDHAFVALTVE 318


>gi|16759734|ref|NP_455351.1| hypothetical protein STY0848 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142493|ref|NP_805835.1| hypothetical protein t2075 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213161219|ref|ZP_03346929.1| hypothetical protein Salmoneentericaenterica_14750 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213586700|ref|ZP_03368526.1| hypothetical protein SentesTyph_37640 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213647750|ref|ZP_03377803.1| hypothetical protein SentesTy_10972 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213855118|ref|ZP_03383358.1| hypothetical protein SentesT_13982 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289825286|ref|ZP_06544565.1| hypothetical protein Salmonellentericaenterica_07871 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25353375|pir||AB0599 conserved hypothetical protein ybhP [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16502027|emb|CAD05260.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138124|gb|AAO69695.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 252

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 77/288 (26%), Gaps = 54/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ N +                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  T   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRGVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              +  R  +   +      + I V+ +HL                 S    Q   L  W
Sbjct: 114 VGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLR-------------ESHRQAQLTMLAGW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +        P ++AGDFN      G        ++       F +               
Sbjct: 161 VNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRAHGRPARTFPVSMPL 213

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +                           + LSDH P+S + 
Sbjct: 214 LRLDRIYVKNANASS-----------PGALPLRNWRHLSDHAPLSAEI 250


>gi|114562597|ref|YP_750110.1| exonuclease III [Shewanella frigidimarina NCIMB 400]
 gi|114333890|gb|ABI71272.1| Exodeoxyribonuclease III [Shewanella frigidimarina NCIMB 400]
          Length = 268

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 81/310 (26%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN                   +    L+    +   DI+ LQE   ++     
Sbjct: 1   MKIVSFNING----------------IRARLHQLQALIDSHSPDIIGLQETKVHDEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   V          +D    A  R
Sbjct: 42  -------FPVADVEAMGYKVHYHGGKAHYGVAMLSKAEPVNVIKGFETDDED----AQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    + NG+ + V +       F       +        +  Q L   + +   +  
Sbjct: 91  LIIGQFKQDNGRILTVFN-----GYFPQGESIHHETKYPAKRKFYQDLMVHLEKHHSADE 145

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
              I GD N                               ++   +     +  F +   
Sbjct: 146 DIAIIGDINISPTDLDIGIGEVNAKRWLKTGKCSFQPEEREWLARLQQWGFIDSFRQLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +R         +           ID  ++ ++    L++        + D       + S
Sbjct: 206 TRTERYSWFDYRSKGFDDNRGLRIDVILVTESMLPRLVES-------DVDYELRGIDKPS 258

Query: 294 DHCPISIDYD 303
           DH PI   + 
Sbjct: 259 DHAPIWSTFS 268


>gi|255025182|ref|ZP_05297168.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL J2-003]
          Length = 256

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 75/285 (26%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +   
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMLDMK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + W  F             +    ++      +         P + +  S +    R
Sbjct: 55  AMLD-WDYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAM-FPR 112

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     + +GK+ ++ + HL                       A  L           
Sbjct: 113 ICVWGKFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAAIIAEN 159

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259
            P +I GDFN + N    N    K  D      +  K      +    LR       IDY
Sbjct: 160 SPVIILGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPTGSFHDFHPLRPENELEKIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +            F    Y     +  G   SDH P++ + D+
Sbjct: 220 IFVSNE---------FQVSTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|223945403|gb|ACN26785.1| unknown [Zea mays]
          Length = 339

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 75/301 (24%), Gaps = 38/301 (12%)

Query: 40  VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-AKVFPKNTWCIFYSTERL 98
                ++  +  S    +    K+ DAD + +QE+  Y+    K    + +   Y     
Sbjct: 34  FPHSPSACLKWKSRSGAILTELKSFDADFMCIQELDEYDTFYKKNMENSGYSSIYIQRSG 93

Query: 99  INHSKRDSNNDIHTAIAVRKKNV-------------------------RVLQQSYPLLGA 133
                        +A  V+K+ +                            + + P    
Sbjct: 94  DKRDGCGIFYKPKSAELVQKEVILYNDLVEKYVPSDNVNSALENNSSAEEDKNAKPDNSK 153

Query: 134 KDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           +   +    R       +    +++     +L +      +     +        L  + 
Sbjct: 154 RGDPNDPRVRLKRDCVGLLAAFKLSDPCDQILIVANTHIYWDPQWIDVKLAQAKYLLSRV 213

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-----RFPKEKDS 243
              +  I+ K       +IAGDFN        N      +   D         +      
Sbjct: 214 SQFEQLISNKYNCKPSVIIAGDFNSTPGDKVYNYLLSANLGSTDEAPIKLRSLYAANGGE 273

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISID 301
               N        +DY  +   +                +        +  SDH PI  D
Sbjct: 274 PEYTNYTPGFTGTLDYIFLSDGSSIKPTSLLRLPRGDSEDVKGGLPNFRHPSDHLPIGAD 333

Query: 302 Y 302
           +
Sbjct: 334 F 334


>gi|197265396|ref|ZP_03165470.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197243651|gb|EDY26271.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
          Length = 252

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 77/288 (26%), Gaps = 54/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ N +                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  T   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              +  R  +   +      + I V+ +HL                 S    Q   L  W
Sbjct: 114 VGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLR-------------ESHRQAQLTMLAGW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +        P ++AGDFN      G        ++       F +               
Sbjct: 161 VNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRAHGRPARTFPVSMPL 213

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +                           + LSDH P+S + 
Sbjct: 214 LRLDRIYVKNANASS-----------PTALPLRNWRHLSDHAPLSAEI 250


>gi|158338364|ref|YP_001519541.1| exodeoxyribonuclease III [Acaryochloris marina MBIC11017]
 gi|158308605|gb|ABW30222.1| exodeoxyribonuclease III [Acaryochloris marina MBIC11017]
          Length = 268

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 97/306 (31%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N                   +    +  +      D++ LQE  +   +   
Sbjct: 1   MKIASWNVN----------------SIRTRLEHVLDWLYTQSIDVLCLQETKVIDEDFPK 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F +  + ++ S ++  N            A+  R     V     PLLG   +     
Sbjct: 45  ASFEEEGYQVYVSGQKAYN----------GVALISRTTLSEVSSGFTPLLGPDLTQHYDQ 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +R +  ++      + +L++++ +   +DS +  Y        +  + L  ++ +    
Sbjct: 95  QKRLITGIISPG---VRILNLYVPNGSEIDSDKYVYK------LEWLELLHHYVEKLLSQ 145

Query: 202 L-VPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCN 246
                +I GDFN  ++    +D   +                     L    ++ +S+  
Sbjct: 146 DPQHLLICGDFNIALDDRDMHDPSKREAHIMSTDRERQALQKVLALGLEDVFRKFNSKSE 205

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  +    Y+     +        D    R  + SDH P
Sbjct: 206 QFSWWNYRAGSFQRNKGWRIDHHYLTPTLYEQATACTI-------DAAPRRLPKPSDHAP 258

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 259 VVVEID 264


>gi|99035972|ref|ZP_01315016.1| hypothetical protein Wendoof_01000152 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 259

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 84/305 (27%), Gaps = 72/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                        L  +  N   DIV LQE+         
Sbjct: 2   LKIATWNVN----------------SIRKRVNQLCSFIVNSQIDIVLLQEIKCTEE---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y+    + +            + V  K   + +    ++ +          
Sbjct: 42  ------QFPYAEIEKLGYEYAIYGQVARNGVCVLSKYPILEKFKIDIVESHQEARY---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +++    KI V  +++ +    DS       +     +    L + ++   ++  
Sbjct: 92  --IECVIKYTNSKIRVGSVYVPNGQSPDSH------AFEYKLKFFDNLYERMSTLLKNEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFPKEKDSRCNA 247
             +IAGD+N   + +   D     ++                 N       +        
Sbjct: 144 LTIIAGDYNIAPDEIDVFD--SNLLNGQVCFHIREREKLRAILNLGFKDAFRISHPNLQQ 201

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + IDY ++   A   L            DD   + +  SDH P+
Sbjct: 202 FTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYI-------DDRLRKLENPSDHTPV 254

Query: 299 SIDYD 303
               +
Sbjct: 255 VCAIE 259


>gi|49475800|ref|YP_033841.1| exodeoxyribonuclease III [Bartonella henselae str. Houston-1]
 gi|49238607|emb|CAF27848.1| Exodeoxyribonuclease III [Bartonella henselae str. Houston-1]
          Length = 260

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 90/303 (29%), Gaps = 66/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNI                    + +  L Q+ +    DIV LQE+ S +     
Sbjct: 1   MKIVTWNIAG----------------IKARHETLYQWLQQNRPDIVCLQEIKSTDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K              KD  +R    
Sbjct: 41  ------NFPRDAIESLGYHIETHGQKSFNGVAILSKKTPDEVIRQLPGNDKDEQTRY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   N   I V  ++L +   ++S +  Y        +  + L        +   
Sbjct: 92  --IEAVYSTNKGVIRVASLYLPNGNPINSEKYPYK------MEWMERLYTHAKSLLKYEE 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                   +L      ++ I             D+   + 
Sbjct: 144 PLVLAGDYNVIPTPLDAKTPKEWSDDALFLPQTRQAFQRIIHLGFYDAIRNVTDTPSFSF 203

Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +         N I ID+ ++   A   L       I           ++ SDH P+ ID
Sbjct: 204 WDFQAAAWRKNNGIRIDHLLLSPEAVDQL-------ICAYSQKEVRGYQKPSDHTPVWID 256

Query: 302 YDF 304
            +F
Sbjct: 257 LNF 259


>gi|333023524|ref|ZP_08451588.1| putative exodeoxyribonuclease III [Streptomyces sp. Tu6071]
 gi|332743376|gb|EGJ73817.1| putative exodeoxyribonuclease III [Streptomyces sp. Tu6071]
          Length = 259

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 72/304 (23%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE  +       
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKTTAE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +    +       +AV  +       S  L            R
Sbjct: 41  ------GFPTEALREAGYESAVNATGRWNGVAVISRAGLDDVVSG-LPDQPAYDGVMEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +      Y        +  + L+  +        
Sbjct: 94  A-----LGATCGPVRVWSVYVPNGREVGHPHYAYK------LEWLEALRTAVAGDAAGTR 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N                              +         P+         
Sbjct: 143 PFAVMGDYNVAPGDEDVYDPAVFEGLTHVTPPERAALAELRATGLGDLVPRPLKYD-RPY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +                   D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLAFPKNRGMRIDLVYANAAFRSAAKDAYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|320654071|gb|EFX22139.1| hypothetical protein ECO7815_07649 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
          Length = 253

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  +       + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGHNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|257420126|ref|ZP_05597120.1| exonuclease III [Enterococcus faecalis T11]
 gi|257161954|gb|EEU91914.1| exonuclease III [Enterococcus faecalis T11]
          Length = 251

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFSELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGV-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|110633851|ref|YP_674059.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1]
 gi|110284835|gb|ABG62894.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1]
          Length = 370

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/367 (12%), Positives = 99/367 (26%), Gaps = 86/367 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVK----------------RTTSDYTLLRQ------- 59
            VR+ ++N+  L  +   S ++N +                 R       +         
Sbjct: 2   SVRIATFNVENLMNRFDFSGFRNQLHQDRTLAMFEIKDEEEYRELERARTIAHTDDTRQL 61

Query: 60  ---YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                    ADI+ LQE+ +  A+          +  +  R    S  +    I  AI +
Sbjct: 62  TALAIAATRADILCLQEVDNQAALNAFEYGYLHKMIGAGYREKYSSAGNDARGIDVAIMM 121

Query: 117 R------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKK 156
           R      +        ++  +   D                 R   R  +E+ V + GK 
Sbjct: 122 RRQTADGEPIEFRRMTTHAHITFDDFNLYTPELAELGLGPNERIFRRDCLEVDVLVGGKP 181

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL----VPFVIAGDFN 212
           + +  +H K+   + +  +    S  +   +A  ++  I  +          ++I GD N
Sbjct: 182 LTIYIVHFKAMNSVRNGRDGRLGSMPIRIAEASAVRRIILDRFGPEGTARKRWMICGDLN 241

Query: 213 RKINYLGNNDDFW---------------KTIDPNDS-LIRFPKEKDSRCNA-NKNLRNKI 255
                +    +                   +           +  +            + 
Sbjct: 242 DYRERVLIEGEAHTGYDFRPVREAQSSVNVLTDGGFCENVVERRPELDRWTLYHTRGPEE 301

Query: 256 P----IDYFVMDQNAYK---------------FLIQESFSEILYNEDDIKSRGKRLSDHC 296
                +DY ++     +               +       + +           + SDHC
Sbjct: 302 RHLCQLDYILLSPALAQKNGKVMPDIVRNGQPWRTIFPPGQEVERYPRTGWDRPKASDHC 361

Query: 297 PISIDYD 303
           P++I  D
Sbjct: 362 PVAISLD 368


>gi|310790575|gb|EFQ26108.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 300

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 77/286 (26%), Gaps = 19/286 (6%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-K 82
           +R+V+ N+   +E       K    R       L       ++  + LQE+        +
Sbjct: 18  LRIVTQNVRYATEHP-TPKEKPWSFRGPRLCNQLDFITSGHESAFICLQEVLYSQIEDVQ 76

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            +  + W                S           +++  +     P       +  A N
Sbjct: 77  SYLGSAWGYIGLGRDDGKRGGEFSPVFYQVDRWKCERSETLWLSKTPE-KPSRGWDAALN 135

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R               V+ +      F          S  LL + A+          +  
Sbjct: 136 RVVTVGEFLDKATDTRVVVMSTH---FDHQGVVAREESAKLLLRIAREWGKGANG--KPP 190

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----KIPI 257
              ++AGDFN                   D   + P+EK           N      + I
Sbjct: 191 TAVLLAGDFNSTPEDNAYKTMVAPESGMVDVSTQVPEEKRYGNKLTYTSFNEPDEEPLRI 250

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+  +   +   +         +++D        LSDH P+  D +
Sbjct: 251 DFLFVKDPSPVTIKTFGVLSNKFDDDV------YLSDHRPVVADIE 290


>gi|303237381|ref|ZP_07323951.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN]
 gi|302482768|gb|EFL45793.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN]
          Length = 250

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 77/305 (25%), Gaps = 79/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L         ++                + +DAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRACVTKGFKES---------------FEAIDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++      +          +  A+  K+  +       +   D   R    
Sbjct: 45  IAFDGYESYWNYAEKKGY----------SGTAIFTKHQPLNVTYGLGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++  +  +                      + L        +   
Sbjct: 91  -----VITLEMENFYLVTCYTPNSQDGLKRLEYRMRWEDDFQTYIKRL--------DEKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                                    +  F      +    
Sbjct: 138 PVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKMTQFLGKGFIDSFRTLYPEQV-TY 196

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++       L+       +Y            SDHCP+ 
Sbjct: 197 SWWSYRFKAREKNAGWRIDYFLLSDRLRAQLVDAKIHTEVY-----------GSDHCPVE 245

Query: 300 IDYDF 304
           ++ +F
Sbjct: 246 VELNF 250


>gi|302528187|ref|ZP_07280529.1| hypothetical protein SSMG_04569 [Streptomyces sp. AA4]
 gi|302437082|gb|EFL08898.1| hypothetical protein SSMG_04569 [Streptomyces sp. AA4]
          Length = 296

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 98/304 (32%), Gaps = 43/304 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+++N+  L          ++  R         +  + +D D+V L E  S ++  ++
Sbjct: 2   LRLLTFNVLQLPLI-------SASPRGWLRAGWAAEAVRAVDPDVVVLNEAFSLSSAGRL 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNND-----------IHTAIAVRKKNVRVLQQSYPLLG 132
             +     ++++ ++     R   +            +   + V  +        +    
Sbjct: 55  ASRLKRHGYHASPQIGALRGRREWDGAVPPVSPLRTLVGGGVRVLSRYPIRWCGQHLYSA 114

Query: 133 AKDSFSRA-GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  A   +      ++    ++W+   HL++      L  T     ++  +Q + L
Sbjct: 115 VHRKTQDALCAKGVALAELDTPDGRVWLAATHLQADEPPTPLSATR----AVRLEQLKEL 170

Query: 192 KDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDPNDSLIRF 237
           ++++++      P ++ GD N +               ++    +     ++P+  +   
Sbjct: 171 REFVSRTAPPDAPVLLVGDLNVEYYAADARGVPGERGQDHADAAEAVGGRLEPDSDMHEH 230

Query: 238 PKEKDSRC-NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             +  S    A      +  +DY     +  +  ++                 +  SDH 
Sbjct: 231 TFDSASNRLVARSQPGYRNVLDYV---GSINENGLRPVPHITTRTVPFRPR--QPASDHF 285

Query: 297 PISI 300
           P+  
Sbjct: 286 PVLA 289


>gi|237801483|ref|ZP_04589944.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024342|gb|EGI04399.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 379

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 92/325 (28%), Gaps = 69/325 (21%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+                  + + +    +   + +  ++   DIV 
Sbjct: 69  GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128

Query: 71  LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LQ +                   +  ++P +T   ++  E + N     S      A   
Sbjct: 129 LQGVDDGAKNSDYQDQLKLLEERLTDLYPCSTQAFYWKAEFVPNPHIWGS-VGRKLATLS 187

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
           R       +   P+  A     +   + A+ +      +G ++ V++  L +        
Sbjct: 188 RFHIDSAERLQLPVPDANIISRQFQPKDALLVSYLPLRDGGELAVVNTSLSTAKRDG--- 244

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------------NYLG 219
                      +Q    +  + + +    P++I GDFN                      
Sbjct: 245 --------TAQKQIAATETLLDKLESGGTPWLIGGDFNLLPLGQYQRLPEPQRQSYAADS 296

Query: 220 NNDDFWK---TIDPNDSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQES 274
                W+    I  N       + K      N +        +DY     +  +     S
Sbjct: 297 ELHALWEKYPMIPSNAESSGIDRSKWLTRFPNDSRINGPDRTVDYLFYSPSLKR----VS 352

Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299
                 +          +SDH P+ 
Sbjct: 353 ARVRRDDTLL-------ISDHLPVI 370


>gi|242309877|ref|ZP_04809032.1| exodeoxyribonuclease LexA [Helicobacter pullorum MIT 98-5489]
 gi|239523878|gb|EEQ63744.1| exodeoxyribonuclease LexA [Helicobacter pullorum MIT 98-5489]
          Length = 256

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +   +DAD+  +QE          
Sbjct: 5   MKLISWNVNGLRACMNKGFM---------------DFFNTIDADVFCIQE-SKMQKEQAT 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  ++++     +          + +A+  K   +       +   D   R    
Sbjct: 49  FDFPNYEEYWNSAEKKGY----------SGVAIFSKKKPLSVAYDMGISHHDKEGRI--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +       ++++++  +                      + L+           
Sbjct: 96  ------ITAEYNDFFLVNVYTPNSKRELERLEYRMEWEDDFRNFLKNLEV--------TK 141

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +  +     F     +   A 
Sbjct: 142 PVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMSVLLDSGFTDTFRYFHPTLEGAY 201

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  +     L   S    ++            SDHCP+ 
Sbjct: 202 SWWSYMGKARENNTGWRIDYFLCSKALDSKLKSASIYPEIF-----------GSDHCPVG 250

Query: 300 IDYD 303
           ++ +
Sbjct: 251 LEIN 254


>gi|170740918|ref|YP_001769573.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46]
 gi|168195192|gb|ACA17139.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46]
          Length = 270

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 84/297 (28%), Gaps = 53/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  + +    D+V LQE+   +     
Sbjct: 1   MRITTWNVN----------------SIRQRLGHLLAFLEEAKPDVVCLQELKCVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  +    L++    L      ++A   
Sbjct: 41  ------SFPRTEIEEAGYVVATHGQKAFNGVALLARQPLPLRELRRGLPGDPEDAQARY- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-SLLSQQAQWLKDW-------- 194
             +E L+      + V  I+L +   + + +     +    L+  A+ L++         
Sbjct: 94  --IEALIPTPAANLRVASIYLPNGNPVGTPKFDDKLAFLRRLTAHARQLREREEVLVLAG 151

Query: 195 ----ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               I +  +   P    GD   +                +       +         + 
Sbjct: 152 DYNVIPEPVDVADPAAWLGDALFRPESRAAFRALLNEGFADALRACDERPGLYTFWDYQA 211

Query: 251 LRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     ID+ ++   A   L+  S  +            ++ SDH P++++ D
Sbjct: 212 GAWPRNLGIRIDHLLLSPQALDRLVSASVQKH-------LRGLEKPSDHVPVTVELD 261


>gi|16764176|ref|NP_459791.1| cytoplasmic protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56414087|ref|YP_151162.1| hypothetical protein SPA1940 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62179380|ref|YP_215797.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161614949|ref|YP_001588914.1| hypothetical protein SPAB_02703 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167550511|ref|ZP_02344268.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992044|ref|ZP_02573142.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168230699|ref|ZP_02655757.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168236740|ref|ZP_02661798.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168240676|ref|ZP_02665608.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168263689|ref|ZP_02685662.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466402|ref|ZP_02700264.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168820041|ref|ZP_02832041.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194443379|ref|YP_002040048.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450151|ref|YP_002044841.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194471467|ref|ZP_03077451.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194734200|ref|YP_002113904.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197251468|ref|YP_002145768.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197363010|ref|YP_002142647.1| hypothetical protein SSPA1809 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198243219|ref|YP_002214776.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200390368|ref|ZP_03216979.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929865|ref|ZP_03220886.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205352071|ref|YP_002225872.1| hypothetical protein SG0792 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856250|ref|YP_002242901.1| hypothetical protein SEN0759 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238913372|ref|ZP_04657209.1| hypothetical protein SentesTe_19906 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|16419319|gb|AAL19750.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56128344|gb|AAV77850.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62127013|gb|AAX64716.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161364313|gb|ABX68081.1| hypothetical protein SPAB_02703 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402042|gb|ACF62264.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194408455|gb|ACF68674.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194457831|gb|EDX46670.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194709702|gb|ACF88923.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195630975|gb|EDX49561.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197094487|emb|CAR60004.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197215171|gb|ACH52568.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197290109|gb|EDY29466.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197937735|gb|ACH75068.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199602813|gb|EDZ01359.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204320859|gb|EDZ06060.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205271852|emb|CAR36687.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205324628|gb|EDZ12467.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329612|gb|EDZ16376.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205334664|gb|EDZ21428.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|205339836|gb|EDZ26600.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205343080|gb|EDZ29844.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205347702|gb|EDZ34333.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206708053|emb|CAR32344.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246071|emb|CBG23873.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992555|gb|ACY87440.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157398|emb|CBW16887.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911837|dbj|BAJ35811.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320085086|emb|CBY94873.1| Uncharacterized protein ybhP [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321226386|gb|EFX51437.1| Endonuclease/Exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322616289|gb|EFY13198.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322619539|gb|EFY16414.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322622765|gb|EFY19610.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322628677|gb|EFY25464.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322631615|gb|EFY28371.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322637141|gb|EFY33844.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322641659|gb|EFY38295.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322644546|gb|EFY41086.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322648478|gb|EFY44930.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322654215|gb|EFY50538.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658130|gb|EFY54397.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322663604|gb|EFY59806.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322670340|gb|EFY66480.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322671576|gb|EFY67698.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322676932|gb|EFY72999.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322682857|gb|EFY78876.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322686536|gb|EFY82518.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|322713851|gb|EFZ05422.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323129120|gb|ADX16550.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323194567|gb|EFZ79760.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323199102|gb|EFZ84198.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323202057|gb|EFZ87116.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208917|gb|EFZ93854.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323215246|gb|EFZ99991.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323220835|gb|EGA05273.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323227306|gb|EGA11474.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323229924|gb|EGA14047.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323233149|gb|EGA17245.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323240884|gb|EGA24926.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323243201|gb|EGA27221.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248740|gb|EGA32668.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251744|gb|EGA35611.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323258764|gb|EGA42421.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323260691|gb|EGA44296.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323267872|gb|EGA51351.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323268742|gb|EGA52202.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326622531|gb|EGE28876.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326627113|gb|EGE33456.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
 gi|332987744|gb|AEF06727.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 252

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 77/288 (26%), Gaps = 54/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ N +                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  T   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              +  R  +   +      + I V+ +HL                 S    Q   L  W
Sbjct: 114 VGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLR-------------ESHRQAQLTMLAGW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +        P ++AGDFN      G        ++       F +               
Sbjct: 161 VNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRAHGRPARTFPVSMPL 213

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +                           + LSDH P+S + 
Sbjct: 214 LRLDRIYVKNANASS-----------PTALPLRNWRHLSDHAPLSAEI 250


>gi|27375729|ref|NP_767258.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110]
 gi|27348867|dbj|BAC45883.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110]
          Length = 271

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/306 (9%), Positives = 74/306 (24%), Gaps = 64/306 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L +WNIN                       L+ ++ K+   D++ LQE      +   
Sbjct: 3   LSLTTWNIN----------------SVRLRIDLVAKFLKSARPDVLCLQE---TKCIDDA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +       RL       +    +  +A+  +      +       K         
Sbjct: 44  FPLKRFK------RLGYEHVALNGQKGYHGVAIVSRIPF-ESKDIRTFCDKVDSRHISVS 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              +  +    K + + + ++ +   +            L       +            
Sbjct: 97  FGTQANIA---KPLVLHNFYVPAGGDIPDPALNEKFDHKLRF--LDEMTACEPLHPRGDD 151

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N   +                     +     +   + +    +        
Sbjct: 152 RHILVGDLNVAPHENDVWSHKQLLKVVSHTPVETEKLKAALAAGEWVDVARERIPMSEKV 211

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  + +     +         +         +R SDH P
Sbjct: 212 YTWWSYRSADWTVGDRGRRLDHIWVSRALKDAVQD-------FKILRDARSWERPSDHVP 264

Query: 298 ISIDYD 303
           +++  +
Sbjct: 265 VTVTLE 270


>gi|88798725|ref|ZP_01114308.1| exodeoxyribonuclease III [Reinekea sp. MED297]
 gi|88778488|gb|EAR09680.1| exodeoxyribonuclease III [Reinekea sp. MED297]
          Length = 274

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 83/312 (26%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NIN                   +    L +     D DI+ LQE+  ++ +   
Sbjct: 1   MKIISFNING----------------IRARLHQLEELKATHDPDILSLQEIKVHSDL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +         +      H  +A   +     +  +P     D       R
Sbjct: 42  ------YPHEAVAAASGLVSQVHGQKAHHGVATLSRQPVPAEYGFPTDVEDDQRRLIVTR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                    +G+++ V++       F     N ++       +    L  W+    +   
Sbjct: 96  HP-----TADGRELVVIN-----GYFPQGESNKHATKWPAKRKFYADLLTWLETHAKPDD 145

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GDFN                         +L    ++++ +     +  +     
Sbjct: 146 LLIVLGDFNIAPVDEDIGIGEKNAKRWLREGKSAFLPEEREWFEKLRAWGLVDSYRHLYP 205

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                      +             ID+ ++ +     +            D       +
Sbjct: 206 DSTELFSWFDYRSKGFDDDPKRGLRIDHLMITEPLVPLIQSAGI-------DYHIRGMDK 258

Query: 292 LSDHCPISIDYD 303
            SDH P  ++ D
Sbjct: 259 PSDHAPAWLELD 270


>gi|326330083|ref|ZP_08196396.1| putative 5'-nucleotidase family protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325952128|gb|EGD44155.1| putative 5'-nucleotidase family protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 657

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 99/347 (28%), Gaps = 72/347 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN----------------------SVKRTTSDYT----- 55
            V++ S+N+       G +   N                        +R   D       
Sbjct: 313 DVKIASFNVLNYFTTLGDADDDNVGDGGCTAYKDRAGDGNSVSGGCDQRGAWDPADFGRQ 372

Query: 56  --LLRQYAKNLDADIVFLQEMGSYNAV------------AKVFPKNTWCIFYSTERLINH 101
              +      LDAD+V L E+ +   +            A +       ++ +       
Sbjct: 373 QSKIVAAINALDADVVGLMEIENSARLGETPDEATNSLVAALNAAAGRKVWTANPSSAEL 432

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVEI--NGKKIW 158
                 + I  AI  ++  VR + ++  L   + D  +    R  +  + +    G    
Sbjct: 433 PDASGADVITNAIIYKRSAVRRIGEARALGDQSGDDQAFGNAREPIGQIFKPADGGAPFL 492

Query: 159 VLDIHLKS-----FCFLDSLENTYSPSCSL-LSQQAQWLKDWITQKKESL--VPFVIAGD 210
            +  H KS         D+       + +    +QA  L  W++  +         +AGD
Sbjct: 493 FVVNHFKSKGSAGPWPGDADTGDGQGASNESRVRQATALVSWVSSVRSETGVTDVALAGD 552

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN           +      +++L    +       +         +D+ +++++A +  
Sbjct: 553 FNSYTQEDPMQVLYEAGFADSETLSGNEE------YSYSFSGLSGSLDHVLLNRHAQRRF 606

Query: 271 IQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303
                  I   E  +                   R SDH P+ +   
Sbjct: 607 TGSDIWSINSGESLLLEYSRYNYTGIDLHTDSPYRSSDHDPVVVGLT 653


>gi|282866534|ref|ZP_06275577.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
 gi|282558581|gb|EFB64140.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
          Length = 322

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 83/297 (27%), Gaps = 40/297 (13%)

Query: 24  VRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------GS 76
           +R+V+WN+      + G + +             + + A   DAD++ LQE+        
Sbjct: 44  LRVVTWNVCGEAGGKRGEAGYCPYRNSPAEKVEQITELAHERDADVIALQEICGGAAGSH 103

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            + +                R    ++       H  +A+  +   V  +S  +L    +
Sbjct: 104 LSLLRTALGPEWSVRRAEGARPDGRTRCRGGLSGHLGVAIAVRGKVVGARSRNVLPPDPA 163

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                    + + V  +G        H+                   + +Q   ++D++ 
Sbjct: 164 GHSHETLPVLCVRV--SGWSYTPCTTHILPGEEP------------RVLEQITGVRDFVR 209

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
           Q      P V+ GDFNR      +     K +    +            +          
Sbjct: 210 Q---EDRPTVLTGDFNRN-----SGAAQLKPLASAFTECPGLLGTGQGTSTYHQWMPAEG 261

Query: 256 -----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-----KRLSDHCPISIDY 302
                 +D+  + + +                D   +          SDH P+  D 
Sbjct: 262 THSFHTLDHVFVSKASEVRAPFARCGVDRDRMDTTPNEAGGVEPDGYSDHAPVFADI 318


>gi|227536411|ref|ZP_03966460.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243787|gb|EEI93802.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 371

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 65/306 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    +R++S+N++     +         +        +     ++  D++  QE  S 
Sbjct: 104 TAADSSIRVLSFNVHLFKTAKKGEEKDFKRE--------VLGIIDSIKPDVICFQEYYSK 155

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                V+ K     F         +  +         A+  K   +              
Sbjct: 156 IKGKHVYAKELRENFGYKYWYFEPASVNDY--EAYGQAIFSKYPVI-------HSGTIVK 206

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-------------------TYS 178
           +  G  R +   +E   K + + ++HL+SF   +  ++                      
Sbjct: 207 NEYGINRIIYADIEKGKKSMRIYNVHLRSFALQNEDKDFIQNPSGESNKTATRRVGRKLK 266

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLI 235
            + +  S+QA+ LK+ I     + +P+++ GDFN        N              S  
Sbjct: 267 QAFASRSEQAEALKEHIET---AKIPYMVMGDFNDTPMSYSVNLIGKGMQNAFQKKGSGW 323

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                +               IDY     +              +N  + +   ++LSDH
Sbjct: 324 GVTHYEMLPIFQ---------IDYIFTSND--------------FNILNYQIVKRKLSDH 360

Query: 296 CPISID 301
            PI  D
Sbjct: 361 YPIWAD 366


>gi|116254288|ref|YP_770126.1| exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258936|emb|CAK10045.1| putative exodeoxyribonuclease III [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 267

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 76/307 (24%), Gaps = 68/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       ++ Q       DI+ LQE    N +   
Sbjct: 3   FSITTWNIN----------------SVRLRMPIVEQLVLKHRPDILCLQETKVTNDLFPA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P            +  +         +  +A+  +            G  D+       
Sbjct: 47  APL---------RAMGYNHIIIHGQKGYHGVAIASRIPLAEDHRQDYCGVGDARH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  + E   +++ + + ++ +    D  + T +P         + +   +    E+  
Sbjct: 93  --ISAIFEHGNRRVRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEANT 147

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N                   +     +   + +     L    +        
Sbjct: 148 SAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETEGLLEVMKRGAWLDLMRQHVPENEKL 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    L                    R SDH P
Sbjct: 208 YTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLK-------RIEILKEARGWDRPSDHVP 260

Query: 298 ISIDYDF 304
           ++  +DF
Sbjct: 261 VTAHFDF 267


>gi|114707219|ref|ZP_01440117.1| exodeoxyribonuclease III [Fulvimarina pelagi HTCC2506]
 gi|114537415|gb|EAU40541.1| exodeoxyribonuclease III [Fulvimarina pelagi HTCC2506]
          Length = 260

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 78/300 (26%), Gaps = 67/300 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWNIN                   +    L  + +  + DI  LQE+ S +       
Sbjct: 3   IASWNING----------------IKARIDGLTAWLQERNPDIACLQEIKSQDE------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                        + +            +A+  K      +        D  +R      
Sbjct: 41  ----TFPKKVIEDLGYHVETHGQKGFNGVALLSKEKPESVRRGLPGDESDEQARY----- 91

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +E L + +   + V  I+L +   L + +  Y  +          L+             
Sbjct: 92  IEGLWQTDSGPLRVASIYLPNGNPLGTAKFEYKLA------WMDRLERHAEALLAHEERL 145

Query: 206 VIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANKNL 251
           ++AGD+N        +D        +   +                 +  D R       
Sbjct: 146 ILAGDYNVIPQPKDVHDPAAWLNDALFQPESRGNLRRLVHLGFADALRMTDDRAELYTFW 205

Query: 252 RNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           ID+ ++   A   L            D      ++ SDH PI  + 
Sbjct: 206 DYQAGAWQKNNGIRIDHLLLSPEAQIVLRSVGI-------DKQVRSWEKPSDHVPILAEL 258


>gi|109900032|ref|YP_663287.1| endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica
           T6c]
 gi|109702313|gb|ABG42233.1| Endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica
           T6c]
          Length = 243

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 89/280 (31%), Gaps = 42/280 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+V++NI++    + V             Y  + Q+  +   DI  +QEM +     + 
Sbjct: 1   MRIVTYNIHSGVGVDKV-----------QSYARIGQFLASQCVDIALIQEMDTRP-PERS 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +   I       +  S     +      AV  +   + +++  +  +         R
Sbjct: 49  IQDDVEQICAGHFTQLISSPALQESSGWYGNAVLSRYPVLSKRTLDVSQSGF-----QPR 103

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESL 202
              E++++ +   + V++ H                      +Q   L +++ +    S 
Sbjct: 104 NIQEVVLDTSLGPLRVINTHKGLKK-------------QERRKQFALLAEYLREKMAGSK 150

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P V+ GDFN          D  + ++ N                         +D    
Sbjct: 151 IPIVLGGDFNEWQFMTKAFKDINQVLNEN---------PVRATFPVAWPLF--RLDRLWT 199

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +      +++    +        + ++ SDH PI +D 
Sbjct: 200 SFDLSLMKKRDANISSISASVLKTPQTRQFSDHYPILLDI 239


>gi|281414526|ref|ZP_06246268.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
          Length = 308

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 81/315 (25%), Gaps = 59/315 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                    VR+ + N+N +                      +R++      D++ LQE+
Sbjct: 28  AGAPKADGAVRVATVNVNGIRAS---------------HRKGMREWFAGRGVDVLTLQEV 72

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               A A V  +    I       ++ +   +       +A+  +      ++   +   
Sbjct: 73  ---RAPADVTAQLVSEIVGEDWDEVHLADAVAAAKGRAGVAIASRFPLGEVRTG--IADA 127

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D +     R     L   +G  + V+  ++ S       +                +   
Sbjct: 128 DGYFDDAGRWIEADLRLPDGSPLTVVSAYVHSGEVDTPKQVDKYR-------FLDEMVRR 180

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
           +++        ++ GD N     L   +                 F +            
Sbjct: 181 LSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKAGFLPEERAYFDRFFGELGFTDVHR 240

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                          +           IDY +   +  +              D   S G
Sbjct: 241 ALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATADLAERAT-------TAVVDRAPSWG 293

Query: 290 KRLSDHCPISIDYDF 304
            R SDH P+ +DY F
Sbjct: 294 TRFSDHAPLVVDYQF 308


>gi|148548255|ref|YP_001268357.1| exodeoxyribonuclease III [Pseudomonas putida F1]
 gi|148512313|gb|ABQ79173.1| Exodeoxyribonuclease III [Pseudomonas putida F1]
          Length = 265

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +++ ++NIN                   S    L  + +    DI  LQE        
Sbjct: 2   KALKIATFNING----------------IRSRLPALLAWLEREQPDIACLQE-------- 37

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  +    L+    L G ++      
Sbjct: 38  --LKAADQQFPRAELEAAGYGSLHHGQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A   ++        V  ++L +       +  Y           + L        ES
Sbjct: 96  LEAAAHGVL--------VACLYLPNGNPQPGPKFDYK------LHWFECLIQHARSLYES 141

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++AGDFN     +                     ++ +     L            
Sbjct: 142 GHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESRACYQRLLDQGWLDAIRHLYPDERV 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ +++     +L +          D       + SDH P+
Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLNPELAPYLKRAGV-------DAWVRNEAKASDHAPV 254

Query: 299 SIDY 302
            I+ 
Sbjct: 255 WIEL 258


>gi|302184783|ref|ZP_07261456.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae 642]
          Length = 380

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 95/325 (29%), Gaps = 68/325 (20%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+                  + + +    +   + +  ++   DIV 
Sbjct: 69  GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128

Query: 71  LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LQ +                   VA ++P +T   ++  E + N     S      A   
Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFIPNPHIWGS-VGRKLATLS 187

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
           R       +   P+  A     +   + A+ +      +G K+ V++  L +        
Sbjct: 188 RFHIDSGERIQLPVPDANLISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228
                      +Q    +  + + +    P++I GDFN             + +      
Sbjct: 246 --------TAQRQVAATETQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEQQRLGYAADS 297

Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274
              +  D     P   +S    R     +  N   I       DY     +  +     S
Sbjct: 298 ELHELWDKYPMIPDNAESSGIDRSKWLTHFPNDSRISGPDRTVDYLFYSPSLKR----VS 353

Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299
                      +     +SDH P+ 
Sbjct: 354 ARV-------RRDDTLLISDHLPVI 371


>gi|227834100|ref|YP_002835807.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975]
 gi|262183414|ref|ZP_06042835.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975]
 gi|227455116|gb|ACP33869.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975]
          Length = 269

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/294 (10%), Positives = 78/294 (26%), Gaps = 47/294 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   +            D D++ LQE    +A    
Sbjct: 1   MRIATWNIN----------------SVRTRAQRAVDLLAKHDIDVLCLQETKVADA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       +    +A+  K      Q++           A  +
Sbjct: 41  ------KFPREPFEEVGYHVTCHGLNQWNGVAILSKEEPEEVQTFFPGQPGFHKDPAKEQ 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDWIT 196
                 V    + I +  +++ +   +      Y           +    Q++ L     
Sbjct: 95  AREARAVSARVRGIEIWSLYVPNGREITDRHFDYKLDFLYSLARYAENRTQSKLLLTGDF 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253
                         F  K +        ++ ++    +    +  +       + ++   
Sbjct: 155 NIAPWDEDVWDMSPFRGKTHVTEPERAAFQMLEEAGLVEVTRRFTEEDRWTYFDYKSLRF 214

Query: 254 ----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                + ID+ +  +   +              D ++  G + SDH P+  D+D
Sbjct: 215 QKNEGMRIDFQLASEPLARL-------VEGAQVDMVERAGDKTSDHVPLIADFD 261


>gi|149180849|ref|ZP_01859351.1| exodeoxyribonuclease [Bacillus sp. SG-1]
 gi|148851368|gb|EDL65516.1| exodeoxyribonuclease [Bacillus sp. SG-1]
          Length = 253

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 82/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VSWN+N +                         + K++DADI  +QE          
Sbjct: 1   MKIVSWNVNGIRACVKKGFM---------------DFFKDVDADIFCIQESKLQEG-QIQ 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +        G  +       R
Sbjct: 45  LDLENYHQYWN----------YAERKGYSGTAVFTKQEPLSVS----YGIGEDDDEPEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++L+++  +     S           +    + L +          
Sbjct: 91  C-----ITLEFEDFYLLNVYTPNSKRDLSRLEDRLHWEERVRAYIKELDEI--------K 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N   N +                   +   T+     +  F      +  + 
Sbjct: 138 PVIYCGDLNVAHNEIDLRNPKSNHGNSGFTTEEREKMSTLLNEGFVDSFRHLYPEKDQSY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++       L        +             SDHCP+ 
Sbjct: 198 TWWSYMSKVRERNIGWRIDYFIVSDRLKDSLKDAGMHTDVL-----------GSDHCPVY 246

Query: 300 IDYDF 304
           I+ DF
Sbjct: 247 IEIDF 251


>gi|108803660|ref|YP_643597.1| endonuclease/exonuclease/phosphatase [Rubrobacter xylanophilus DSM
           9941]
 gi|108764903|gb|ABG03785.1| Endonuclease/exonuclease/phosphatase [Rubrobacter xylanophilus DSM
           9941]
          Length = 265

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 74/291 (25%), Gaps = 42/291 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A ++R++++N+      +G + W+              +  +    D++  QE+   N  
Sbjct: 2   AARLRVMTFNVRGAYHPDGRNAWRRRRSLN-------ARVVRGAAPDLIGFQELQRANLR 54

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-----AKD 135
                   +       RL      +       AI      + +L+     L         
Sbjct: 55  FYERELPRYR------RLPGPEYENRRPRARNAIFWDPDRLELLESGGFWLSETPERFSR 108

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S+     R A   +  +      +L ++              S   +   +  +      
Sbjct: 109 SWGSRQVRSANWAVFRVLPSGPDLLHLNTHLDHVSAEARRRGSRLIAGRLEGVRL----- 163

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                   P ++ GDFN                       R     ++  +       + 
Sbjct: 164 --------PVLLTGDFNCNPGSRTYEVFASAGFADA--HRRAGNPPENTFHRFMGEGYRS 213

Query: 256 ----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID+ ++            +  +              SDH P+  D 
Sbjct: 214 GKEGRIDWILVRDGGRAR-----WEVLSCRVVRDCEPPLYPSDHYPVVADL 259


>gi|317047407|ref|YP_004115055.1| endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b]
 gi|316949024|gb|ADU68499.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b]
          Length = 253

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 85/293 (29%), Gaps = 49/293 (16%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +    +++++ N +                        LR  A+   ADIVFLQE+ 
Sbjct: 2   TQNAQGFSIKVLTINTHKGFTSFNRRF----------ILPELRDAARATSADIVFLQEVM 51

Query: 76  SYNAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYP 129
             +A+  +    +P+ +   F +     +++        + H   A+  +   V  ++  
Sbjct: 52  GTHAIHSLHIENWPETSHYEFIADTMWHDYAYGRNAVYPEGHHGNAILSRFPIVEYENRD 111

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +  A        NR  +   + + G+   +  I +                      Q +
Sbjct: 112 ISVAGG-----ENRGMLHCKISLPGQPQPLHVICVHLGLR-----------EPHRRAQLR 155

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            + + I        P V+AGDFN               ++       F  +         
Sbjct: 156 MMCEMIAS-LPPDAPLVVAGDFNDWQVRANPYLKRHAGLEE-----VFSLKSGRPARTFP 209

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +D   +   A                         LSDH P++++ 
Sbjct: 210 ARFPLLRLDRIYVRNAAISQPWALPVK-----------PWSHLSDHAPLAVEI 251


>gi|257079900|ref|ZP_05574261.1| exonuclease III [Enterococcus faecalis JH1]
 gi|294779916|ref|ZP_06745298.1| exodeoxyribonuclease III [Enterococcus faecalis PC1.1]
 gi|307269235|ref|ZP_07550589.1| exodeoxyribonuclease III [Enterococcus faecalis TX4248]
 gi|256987930|gb|EEU75232.1| exonuclease III [Enterococcus faecalis JH1]
 gi|294453028|gb|EFG21448.1| exodeoxyribonuclease III [Enterococcus faecalis PC1.1]
 gi|306514454|gb|EFM83015.1| exodeoxyribonuclease III [Enterococcus faecalis TX4248]
 gi|329578016|gb|EGG59431.1| exodeoxyribonuclease III [Enterococcus faecalis TX1467]
          Length = 251

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 73/305 (23%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                          
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIFAKEE-ALSVRYGLGIEAH------------------ 85

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  +  G+ I +                      +         + ++ +  +   
Sbjct: 86  -------DQEGRMITLEYPEFFMVTCYTPNSQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|54293461|ref|YP_125876.1| hypothetical protein lpl0510 [Legionella pneumophila str. Lens]
 gi|53753293|emb|CAH14740.1| hypothetical protein lpl0510 [Legionella pneumophila str. Lens]
          Length = 257

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 89/294 (30%), Gaps = 50/294 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                 + V L+++NI+       V                +R     L+ D VFLQE+ 
Sbjct: 6   SMQPEMRSVSLITYNIHKGFGVGAVRFL----------LPEMRDAIAGLNPDFVFLQEVQ 55

Query: 76  --SYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                   ++           I  +      ++K       H   A+  K      +S  
Sbjct: 56  GKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESIN 115

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L           +R  +   ++++   I +L +HL  F              +  ++Q +
Sbjct: 116 LSN-----MNRASRGILHTQLKLDNNIIHLLCVHLGLFK-------------AERTEQCK 157

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L   I        P ++AGDFN   +    +    + +   ++ +    +      +  
Sbjct: 158 ALIQRIKDVVPKNEPLIMAGDFNDWRHV--ISKILAENLGIEEAFVALEGQH---ARSFP 212

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++  + +D         + +                   + LSDH P+   ++
Sbjct: 213 AIKPALCVDRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 255


>gi|169631267|ref|YP_001704916.1| exodeoxyribonuclease III protein XthA [Mycobacterium abscessus ATCC
           19977]
 gi|169243234|emb|CAM64262.1| Probable exodeoxyribonuclease III protein XthA [Mycobacterium
           abscessus]
          Length = 266

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/306 (10%), Positives = 68/306 (22%), Gaps = 66/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  + +    D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRARADRVISWLERSGTDVLAMQETKCSD----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  +                S S     
Sbjct: 40  -----KQFPMQAFTDAGYEVAHVGFSQWNGVAIASRVGLEDVTVGFEGQPGWSSSEDIEE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201
            +    +      + V  +++ +   L+     Y        +    L+D          
Sbjct: 95  ASEARALGATCNGVRVWSLYVPNGRTLEDPHYQYK------LRWLSALRDTAAGWLADAP 148

Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                + GD+N                           +  ++                 
Sbjct: 149 DQQVALVGDWNIAPTDDDIWSVEAYQGSTHVSEPERSAFTAMNDAGFADVVRPFTPGP-G 207

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +      K            + D  + +GK  SDH P
Sbjct: 208 VYTYWDYTQLSFPKKRGMRIDFVLGSPEFAKR-------VGNAHIDREERKGKGASDHAP 260

Query: 298 ISIDYD 303
           + +D D
Sbjct: 261 VVVDLD 266


>gi|119897710|ref|YP_932923.1| hypothetical protein azo1419 [Azoarcus sp. BH72]
 gi|119670123|emb|CAL94036.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 283

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 74/309 (23%), Gaps = 56/309 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA----DIVFLQEM-GSYN 78
           +R+VSWNI      +GV                L +  + L A    D++ LQE+   + 
Sbjct: 1   MRIVSWNIQWGRGADGVV--------------RLARTIEALRALGELDVICLQEVAEHFP 46

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAVRKKNVRVLQQSYPLL 131
            +      +                  +                +  +        + L 
Sbjct: 47  GLPGGEAGDEPRQLAEAFPGYEAVFGAAVDVPGAGGGRARFGNLLLSRLPLGAVFRHLLP 106

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              D    +  R  VE +V+     + V+  HL+ +            +   L       
Sbjct: 107 APPDPGRPSMQRVCVEAVVQAPFGDLRVMTTHLEYYSPRQ--RAAQVQALRTLQHDVAAA 164

Query: 192 KDWITQKKESL---------VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------ 236
                  KE              V+ GDFN +   + +            +         
Sbjct: 165 ALLPPAGKEGNPAFAARARPAAAVLCGDFNCEPGSVEHAALCADAAVAGAAFRDCWTVLH 224

Query: 237 --FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P       +  +        D+    +     +                      SD
Sbjct: 225 GAAPHPPSVGLHGAEWPDRPYCCDFVFASEGLVPRVRSLQIVTETA-----------ASD 273

Query: 295 HCPISIDYD 303
           H P+ ++  
Sbjct: 274 HQPVLLELS 282


>gi|22135535|gb|AAM93248.1| deoxyribonuclease I precursor [Bos taurus]
          Length = 282

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 90/284 (31%), Gaps = 30/284 (10%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--K 82
           ++ ++NI T  E               +  + + +  +    DIV +QE+   + VA  K
Sbjct: 24  KIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVGK 72

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +          +   +++     ++         R   V VL       G +   + + +
Sbjct: 73  LLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFS 132

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +    +  K+    I        D++    S     L  Q +W  +         
Sbjct: 133 REPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN--------- 183

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              ++ GDFN   +Y+ ++      +  + +      +       + N       D  V+
Sbjct: 184 -DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWVIPDSADTTATSTNCAY----DRIVV 238

Query: 263 DQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303
             +  +  ++  S +   +      S      +SDH P+ +   
Sbjct: 239 AGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 282


>gi|328886463|emb|CCA59702.1| Sphingomyelinase C precursor [Streptomyces venezuelae ATCC 10712]
          Length = 346

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 90/295 (30%), Gaps = 31/295 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N    S+     L+ N  +   +       + +    D+V LQE    +A   +
Sbjct: 60  LKVLTYNTFLFSKT----LYPNWGQDHRAKAIPTAPFYQGQ--DVVVLQEAFDNSASDAL 113

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAKD 135
              +     Y T  +   +                   + +  K   V ++ Y    A  
Sbjct: 114 KANSAGQYPYQTPVVGRGTGGWDATGGSYSSTTPEDGGVTILSKWPIVRKEQYVYKDACG 173

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +   + N+    +++ +NG K+ VL  H +S     S       +  + S+Q + +  ++
Sbjct: 174 ADWWS-NKGFAYVVLNVNGSKVHVLGTHAQSTDPGCSAG----EAVQMRSRQFKAIDAFL 228

Query: 196 TQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANK 249
                 +    ++AGD N                                      +   
Sbjct: 229 DAKNIPAGEQVIVAGDMNVDSRTPEYGTMLADAGLAAADARTGHPYSFDTELNSIASERY 288

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPI 298
               +  +DY +      +     +   +  +     S   +      LSDH P+
Sbjct: 289 PDDPREDLDYVLYRAGNARPANWTNNVVLEKSAPWTVSSWGKSYTYTNLSDHYPV 343


>gi|289424786|ref|ZP_06426568.1| exodeoxyribonuclease III [Propionibacterium acnes SK187]
 gi|289427574|ref|ZP_06429286.1| exodeoxyribonuclease III [Propionibacterium acnes J165]
 gi|295131421|ref|YP_003582084.1| exodeoxyribonuclease III [Propionibacterium acnes SK137]
 gi|289154749|gb|EFD03432.1| exodeoxyribonuclease III [Propionibacterium acnes SK187]
 gi|289159065|gb|EFD07257.1| exodeoxyribonuclease III [Propionibacterium acnes J165]
 gi|291377273|gb|ADE01128.1| exodeoxyribonuclease III [Propionibacterium acnes SK137]
 gi|313763084|gb|EFS34448.1| exodeoxyribonuclease III [Propionibacterium acnes HL013PA1]
 gi|313773022|gb|EFS38988.1| exodeoxyribonuclease III [Propionibacterium acnes HL074PA1]
 gi|313802417|gb|EFS43642.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA2]
 gi|313807850|gb|EFS46334.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA2]
 gi|313812037|gb|EFS49751.1| exodeoxyribonuclease III [Propionibacterium acnes HL083PA1]
 gi|313812136|gb|EFS49850.1| exodeoxyribonuclease III [Propionibacterium acnes HL025PA1]
 gi|313819198|gb|EFS56912.1| exodeoxyribonuclease III [Propionibacterium acnes HL046PA2]
 gi|313819763|gb|EFS57477.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA1]
 gi|313823880|gb|EFS61594.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA2]
 gi|313827241|gb|EFS64955.1| exodeoxyribonuclease III [Propionibacterium acnes HL063PA1]
 gi|313828429|gb|EFS66143.1| exodeoxyribonuclease III [Propionibacterium acnes HL063PA2]
 gi|313831114|gb|EFS68828.1| exodeoxyribonuclease III [Propionibacterium acnes HL007PA1]
 gi|313833483|gb|EFS71197.1| exodeoxyribonuclease III [Propionibacterium acnes HL056PA1]
 gi|313838117|gb|EFS75831.1| exodeoxyribonuclease III [Propionibacterium acnes HL086PA1]
 gi|314914557|gb|EFS78388.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA4]
 gi|314919199|gb|EFS83030.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA1]
 gi|314920633|gb|EFS84464.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA3]
 gi|314925728|gb|EFS89559.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA3]
 gi|314931457|gb|EFS95288.1| exodeoxyribonuclease III [Propionibacterium acnes HL067PA1]
 gi|314957017|gb|EFT01123.1| exodeoxyribonuclease III [Propionibacterium acnes HL027PA1]
 gi|314957831|gb|EFT01934.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA1]
 gi|314960672|gb|EFT04773.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA2]
 gi|314963372|gb|EFT07472.1| exodeoxyribonuclease III [Propionibacterium acnes HL082PA1]
 gi|314969733|gb|EFT13831.1| exodeoxyribonuclease III [Propionibacterium acnes HL037PA1]
 gi|314974296|gb|EFT18392.1| exodeoxyribonuclease III [Propionibacterium acnes HL053PA1]
 gi|314976933|gb|EFT21028.1| exodeoxyribonuclease III [Propionibacterium acnes HL045PA1]
 gi|314979892|gb|EFT23986.1| exodeoxyribonuclease III [Propionibacterium acnes HL072PA2]
 gi|314985810|gb|EFT29902.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA1]
 gi|314988407|gb|EFT32498.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA2]
 gi|314988831|gb|EFT32922.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA3]
 gi|315079798|gb|EFT51774.1| exodeoxyribonuclease III [Propionibacterium acnes HL078PA1]
 gi|315084894|gb|EFT56870.1| exodeoxyribonuclease III [Propionibacterium acnes HL027PA2]
 gi|315087238|gb|EFT59214.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA3]
 gi|315088971|gb|EFT60947.1| exodeoxyribonuclease III [Propionibacterium acnes HL072PA1]
 gi|315096818|gb|EFT68794.1| exodeoxyribonuclease III [Propionibacterium acnes HL038PA1]
 gi|315100579|gb|EFT72555.1| exodeoxyribonuclease III [Propionibacterium acnes HL046PA1]
 gi|315109351|gb|EFT81327.1| exodeoxyribonuclease III [Propionibacterium acnes HL030PA2]
 gi|327325640|gb|EGE67438.1| exodeoxyribonuclease III [Propionibacterium acnes HL096PA2]
 gi|327328234|gb|EGE70001.1| exodeoxyribonuclease III [Propionibacterium acnes HL096PA3]
 gi|327445310|gb|EGE91964.1| exodeoxyribonuclease III [Propionibacterium acnes HL043PA1]
 gi|327446951|gb|EGE93605.1| exodeoxyribonuclease III [Propionibacterium acnes HL043PA2]
 gi|327449053|gb|EGE95707.1| exodeoxyribonuclease III [Propionibacterium acnes HL013PA2]
 gi|327452601|gb|EGE99255.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA3]
 gi|327457644|gb|EGF04299.1| exodeoxyribonuclease III [Propionibacterium acnes HL083PA2]
 gi|328751915|gb|EGF65531.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA1]
 gi|328756939|gb|EGF70555.1| exodeoxyribonuclease III [Propionibacterium acnes HL020PA1]
 gi|328759048|gb|EGF72664.1| exodeoxyribonuclease III [Propionibacterium acnes HL025PA2]
 gi|328762251|gb|EGF75743.1| exodeoxyribonuclease III [Propionibacterium acnes HL099PA1]
 gi|332676289|gb|AEE73105.1| exodeoxyribonuclease III [Propionibacterium acnes 266]
          Length = 297

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 83/320 (25%), Gaps = 64/320 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+NIN +      +L +   +R  +            D D++ LQE+    A   +
Sbjct: 1   MRIASFNINGIRA----ALKRGFSERMEAR-----------DCDVIGLQEVRCRPA--DL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGAKDSFSRA 140
                     S        +        TA A       ++ +     P      + +  
Sbjct: 44  PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTD 103

Query: 141 GNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           G    +         + V++    + V  ++L      D                    +
Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFR 163

Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232
           D +     +       F++ GDFN                           F   + P+ 
Sbjct: 164 DHLVRRRQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDT 223

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +     +             +           IDY +         I           D
Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITAEI-------D 276

Query: 284 DIKSRGKRLSDHCPISIDYD 303
              S  +R SDH  + +DYD
Sbjct: 277 RDPSYSERTSDHAAVVVDYD 296


>gi|145299175|ref|YP_001142016.1| extracellular nuclease [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142851947|gb|ABO90268.1| extracellular nuclease [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 1072

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/367 (12%), Positives = 92/367 (25%), Gaps = 84/367 (22%)

Query: 19  SVAQKVRLVSWNINTLSE--------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           + A  +R+ S+N+               G +    +V       T +      L+AD+V 
Sbjct: 472 AEAGDLRVASFNVLNFFTTVVGGDANPTGSNRGALTVAEFEKQRTKIVSAITRLNADVVG 531

Query: 71  LQEMGSYNA--------VAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV 121
           L E+ +           + +               + +   +    D I   +  R  +V
Sbjct: 532 LMEIENNGYGDNSAIANLVEALNAAQPDEADHYRLIASPDGQPIGTDAITVGLIYRPASV 591

Query: 122 R-----------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK--KIWVLDIHLKSFC 168
                       V Q        K      G R +V            + ++  HLKS  
Sbjct: 592 TPQGAASLIVLPVQQAEALDASGKPVAINQGMRESVLQQFSSPKGDAPLTLVVNHLKSKG 651

Query: 169 FLDSLENTYSPSCSLLSQQ----------AQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
                +     S   L  Q          A+ L + +          +I GD N      
Sbjct: 652 SACFEDYPDYASADPLDGQGHCNALRVSAAKVLGESLKALSGD---LLIIGDLNAYGMED 708

Query: 219 GNN---------------DDFWKTI-------------DPNDSLIRFPKEKDSRCNANKN 250
                                + T+             +    +    +   +   +   
Sbjct: 709 PIRVLTSYDPAAQPRQIMSASFTTLAGQPFEESGSALGNGYGFVNLNTRFHGTDTYSYSY 768

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------------LSDHCP 297
                 +D+ + + +    +I      I   E +    G +              SDH P
Sbjct: 769 EGELGNLDHALANPSLAAKVIGIEDWHINSAESNFFEYGSKYTGQLAKSDGPFSASDHDP 828

Query: 298 ISIDYDF 304
           + +   +
Sbjct: 829 VLVAIQY 835


>gi|86747505|ref|YP_484001.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
 gi|86570533|gb|ABD05090.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
          Length = 270

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 71/307 (23%), Gaps = 65/307 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       L+ ++ K    D++ LQE         
Sbjct: 2   SFTLTTWNIN----------------SVRLRIELVAKFLKAQRPDVLCLQETKCP---DD 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP   +       RL       +    +  +AV  K   +           DS      
Sbjct: 43  AFPAKRFK------RLGYEHIALNGQKGYHGVAVISKIPFLATDIRTFCDNIDSRH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + + ++       +L  +       D  +   +P           ++          
Sbjct: 93  ---ISVSLQTGAADPPLLLHNFYVPAGGDIPDPEANPKFKHKLSFLDEMRACAPLHPSGD 149

Query: 203 VPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GD N   +                     D         + +    +       
Sbjct: 150 ARHILVGDLNVAPHEHDVWSHKQLLKVVSHTPVECDKLLAVQAAGNWVDVARERIPLSEK 209

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+  + +               +         +R SDH 
Sbjct: 210 IYTWWSYRAADWTIGDRGRRLDHIWVSEALR-------ARVTDFKILRDARSWERPSDHV 262

Query: 297 PISIDYD 303
           P+++  +
Sbjct: 263 PVTVTME 269


>gi|86359550|ref|YP_471442.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
 gi|86283652|gb|ABC92715.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
          Length = 267

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 78/307 (25%), Gaps = 68/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       ++ Q+      DI+ LQE    N +   
Sbjct: 3   FSITTWNIN----------------SVRLRMPIVEQFVLKHRPDILCLQETKVPNELFPA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P            +            +  +A+  +   +        G  D+       
Sbjct: 47  APL---------RAMGYDHIIIHGQKGYHGVAIASRIPLMEDHRQDYCGVGDARH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  + E   +++ + + ++ +    D  + T +P         + +   +    E+  
Sbjct: 93  --ISAVFERGNRRVRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEANT 147

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N                   +     D   + +     L    +   +    
Sbjct: 148 SAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLLEVMKRGAWLDLMRQHVPASEKL 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    L                    R SDH P
Sbjct: 208 YTWWSYRAKDWQAADRGRRLDHIWSSSDLGPHLQ-------RIEILKEARGWDRPSDHVP 260

Query: 298 ISIDYDF 304
           ++  +DF
Sbjct: 261 VTAHFDF 267


>gi|49478354|ref|YP_037804.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|301055229|ref|YP_003793440.1| exodeoxyribonuclease III [Bacillus anthracis CI]
 gi|49329910|gb|AAT60556.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|300377398|gb|ADK06302.1| exodeoxyribonuclease III [Bacillus cereus biovar anthracis str. CI]
          Length = 252

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 80/305 (26%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L        +               +Y +  +ADI  +QE+        +
Sbjct: 1   MKFISWNVNGLRAVIAKGGF--------------LEYLEESNADIFCVQEIKLQEGQIDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NVEGYYTYW-----------NYAVKKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +                      + L        +   
Sbjct: 92  -----VITLEFEDFYIITLYTPNSKRGLERLEYRMKWEDDFRAYIKRL--------DEKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V  GD N                   +     + +  I     +  +      +  A 
Sbjct: 139 SVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFIDTYRYLYPDQEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     +     +  +             SDHCP+ 
Sbjct: 199 SWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAKINSEV-----------MGSDHCPVE 247

Query: 300 IDYDF 304
           +  +F
Sbjct: 248 LHINF 252


>gi|34763743|ref|ZP_00144662.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886479|gb|EAA23735.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 253

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                 +       Y    +ADI  LQE    +A    
Sbjct: 1   MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                         + ++   ++   
Sbjct: 91  -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMTWEDEFRKYLKNLEKKK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +  +  +  F     +     
Sbjct: 138 PVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFVDTFRYFYPNLEQVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +   K L+       +             SDHCP+ 
Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQI-----------EGSDHCPVV 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 LILDF 251


>gi|224582626|ref|YP_002636424.1| hypothetical protein SPC_0810 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224467153|gb|ACN44983.1| hypothetical protein SPC_0810 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 252

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 77/288 (26%), Gaps = 54/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ N +                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  T   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              +  R  +   +      + I V+ +HL                 S    Q   L  W
Sbjct: 114 VGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLR-------------ESHRQAQLTMLAGW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +        P ++AGDFN      G        ++       F +               
Sbjct: 161 VNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRAHGRPARTFPVSMPL 213

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +                           + LSDH P+S + 
Sbjct: 214 LRLDRIYVKNANASS-----------PTALPLRNWRHLSDHAPLSAEI 250


>gi|327405504|ref|YP_004346342.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
 gi|327321012|gb|AEA45504.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
          Length = 375

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 80/294 (27%), Gaps = 55/294 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++S+N+            +N           + +Y + ++ D+V  QE    +  +    
Sbjct: 107 VMSYNVRLFDVYNSSLAGRNES------RNNIVKYIQEVNPDVVCFQEFFHQDKPSSFST 160

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           ++T       +           N  +  I +  K   + +        K + +       
Sbjct: 161 RDTLIDLLDYKYYHERYSHRIRNRQNFGICMLSKYPIIAKGDVMFENFKTTDN-----YC 215

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLE---------------------NTYSPSCSLL 184
           +   +      I   +IHL+S                             +    +    
Sbjct: 216 IFADIVKGDDTIRFYNIHLQSIKLQQEDYELFGEKNKQAGGKKSTARLLIDKLRIAYPER 275

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           ++QA+ + + +     S  P VI GDFN        N         +D +  F + +   
Sbjct: 276 AEQAERVVEHLKT---SPYPVVICGDFNDTPMSYVYNQ------FNSDLVDSFRETQTGI 326

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                       IDY     +     +      + Y            SDH  +
Sbjct: 327 GITYVGRVPAGRIDYIFHSGDLGA--VNFQIQAVPY------------SDHRAV 366


>gi|330952963|gb|EGH53223.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7]
          Length = 380

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 94/342 (27%), Gaps = 75/342 (21%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C  +V        Q +++++WNI  L+                  + + +    +
Sbjct: 52  LLTASCNPAVEAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYN 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   VA ++P +T   ++  E + 
Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQLALIKERVADLYPCSTQAFYWKAEFVP 171

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157
           N     S      A   R       +   P+  A     +   + A+ +      +G K+
Sbjct: 172 NPHIWGS-VGRKLATLSRFHIDSAERIQLPVPDANIISRQFQPKDALLVSYLPLRDGGKL 230

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V++  L           T   +     +Q    +  + + +    P++I GDFN     
Sbjct: 231 AVINTSLT----------TARHAGDTAPKQVAATETQLDKLESGGTPWLIGGDFNLLPLG 280

Query: 218 LGNNDDFWKTIDPNDSLIR-------------FPKEKDSRCNANKNLRNKIPI------- 257
                   + +                            R     +  N   I       
Sbjct: 281 QYQRLPEEQRLGYAADSELHALWEKYPMIPDNAESSGIDRSKWLTHFPNDSRINGPDRTV 340

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           DY     +  +     S           +     +SDH P+ 
Sbjct: 341 DYLFYSPSLKR----VSARV-------RRDDTLLISDHLPVI 371


>gi|327312703|ref|YP_004328140.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
 gi|326944135|gb|AEA20020.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
          Length = 366

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 93/334 (27%), Gaps = 81/334 (24%)

Query: 2   IRKYVLALVFFLV---------PCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKR 49
           +R   L+L+ FL+         P      +    ++++S+N+   S        +N    
Sbjct: 67  LRTVWLSLLGFLLCYGPVRTYSPFNLPEEKPHGSIKVLSYNVFMFSIWSEPGGEQNP--- 123

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                  +  Y     ADIV LQE   S     +++P       Y    +      D   
Sbjct: 124 -------IVDYILKSKADIVCLQEAQASMEGTDRIYPALKKHYPYFRLMVKKKPGADH-- 174

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
                + +  +   + Q S P     +              V+I G K  V++ HL+S  
Sbjct: 175 -----MVLLSRYPVLWQDSIPYGSNSNQSVAYM--------VDIKGTKTLVVNNHLESNG 221

Query: 169 FLDSLENTYSPSCS------------------------LLSQQAQWLKDWITQKKESLVP 204
                +  +                               + QA+ +  ++ +  +  VP
Sbjct: 222 LSTDDKEEFKTLVKGNMGTGEAKDESFHLLRKLGSVSVRRAPQAEAVARYVRKYLDRKVP 281

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GDFN        +    + +        +    +    +         ID+     
Sbjct: 282 VILCGDFNDSPLSYT-HRTIARELTD-----CYVASGNGPGISYHKSGMYFRIDHIFCSD 335

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +                           SDH PI
Sbjct: 336 DF----EPYGAKVDNSVT---------ASDHYPI 356


>gi|163844025|ref|YP_001628429.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445]
 gi|163674748|gb|ABY38859.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445]
          Length = 268

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       L+ Q+ ++   D++ LQE         +
Sbjct: 3   FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                S    +  +A   +      +        D        
Sbjct: 44  FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+   
Sbjct: 93  --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N     N + ++    K +                            +    
Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLENLRIKGGWSDLMRHLIAADQKI 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    +                    R SDH P
Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDHVP 260

Query: 298 ISIDYD 303
           +   +D
Sbjct: 261 VIATFD 266


>gi|120401745|ref|YP_951574.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1]
 gi|119954563|gb|ABM11568.1| Exodeoxyribonuclease III [Mycobacterium vanbaalenii PYR-1]
          Length = 272

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/305 (9%), Positives = 73/305 (23%), Gaps = 61/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  + +  D D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRARVDRVTDWLERADVDVLAMQETKCSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       +    +A+  +      +         +       
Sbjct: 41  ------QFPTMPFAALGYEIVHCGFNQWNGVAIASRVGIDDVEVGFDGQPTWNDKPEVEA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
            A    +      + V  +++ +   +DS    Y        +    L+D  +   ES  
Sbjct: 95  AAEARALGATCGGVRVWSLYVPNGRTVDSPHYVYK------LEWLAALRDTASSWLESNP 148

Query: 203 -VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P  + GD+N                  +        +  +                  
Sbjct: 149 SAPIALVGDWNIAPIDDDVWDISLFQDSTHVTEPERAAFNAVVDAGFTDVVRPFTPGP-G 207

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +      + ++    +         +      SDH P
Sbjct: 208 TFTYWDYTQLRFPKNRGMRIDFILGSPALAERVVHAEIARDERKTGKNRVGS--PSDHAP 265

Query: 298 ISIDY 302
           + +D 
Sbjct: 266 VVVDL 270


>gi|332024107|gb|EGI64323.1| Recombination repair protein 1 [Acromyrmex echinatior]
          Length = 356

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +++ +WN+              S  R       L  Y    DADI+ LQE       +  
Sbjct: 104 LKICTWNV--------------SGIRAVIKKHGL-DYITKEDADIIALQETKCDKGKMPD 148

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++   +   +            +A+  K   +  +     G  DS      
Sbjct: 149 EVKLPGYHHYFLDSKKPGY----------CGVALFSKEKPISVK----YGLNDSTFDTEG 194

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      + +   + +V+++++ +                L  +  + L           
Sbjct: 195 RI-----ITVEFPEFFVINVYVPNAGQKLVTLPKRLEWNKLFKKHIEELDQ--------K 241

Query: 203 VPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA-------- 247
            P +I GD N     +   +         +   + ND              +        
Sbjct: 242 KPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERNDMTDFLAAGFIDTFRSLYPEIEGA 301

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DYF++ +     +            D+I  +    SDHCP+
Sbjct: 302 YTFWSYFANARSKNIGWRLDYFLISERIKNKVC-----------DNIIRKDVYGSDHCPV 350

Query: 299 SIDYD 303
            +  +
Sbjct: 351 ILYIN 355


>gi|229822126|ref|YP_002883652.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333]
 gi|229568039|gb|ACQ81890.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333]
          Length = 263

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 83/302 (27%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  + +  D D++ LQE        + 
Sbjct: 1   MRIATWNVN----------------SIRARAERVAAWLERSDVDVLALQE---TKVPDEQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP  ++           +      +     +A+  +      +    LG     +     
Sbjct: 42  FPVMSFAAV-------GYDVVHHGHSQWNGVAIVSRVGIDDVE----LGFPGQPTWGDPA 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-L 202
            A    +      + +  +++ +   L+     Y           + L+D          
Sbjct: 91  VAEARALGATCGGVRLWSLYVPNGRTLEDPHYAYKLD------WLRALRDAAATWAAEPG 144

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
               +AGD+N                  +        +  +D         +    +   
Sbjct: 145 AQVALAGDWNIAPLDEDVWDMSLFDGATHVSPAERAAFAALDDAGFAE-VTRLHVPQAYT 203

Query: 248 NKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + +         + ID+ +  +   + +            D  + +GK  SDH P+ +
Sbjct: 204 YWDYQRLRFPRNEGMRIDFVLATRALAERVAAVGI-------DREERKGKGASDHVPVVV 256

Query: 301 DY 302
           + 
Sbjct: 257 EI 258


>gi|15800541|ref|NP_286553.1| hypothetical protein Z1009 [Escherichia coli O157:H7 EDL933]
 gi|15830122|ref|NP_308895.1| hypothetical protein ECs0868 [Escherichia coli O157:H7 str. Sakai]
 gi|16128758|ref|NP_415311.1| conserved protein, endo/exonuclease/phosphatase family PFAM PF03372
           [Escherichia coli str. K-12 substr. MG1655]
 gi|24112158|ref|NP_706668.1| hypothetical protein SF0740 [Shigella flexneri 2a str. 301]
 gi|26246763|ref|NP_752803.1| hypothetical protein c0873 [Escherichia coli CFT073]
 gi|30062275|ref|NP_836446.1| hypothetical protein S0781 [Shigella flexneri 2a str. 2457T]
 gi|74311333|ref|YP_309752.1| hypothetical protein SSON_0769 [Shigella sonnei Ss046]
 gi|89107641|ref|AP_001421.1| predicted DNase [Escherichia coli str. K-12 substr. W3110]
 gi|91209822|ref|YP_539808.1| putative DNase [Escherichia coli UTI89]
 gi|110804791|ref|YP_688311.1| hypothetical protein SFV_0773 [Shigella flexneri 5 str. 8401]
 gi|168764306|ref|ZP_02789313.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4501]
 gi|168787004|ref|ZP_02812011.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC869]
 gi|168799936|ref|ZP_02824943.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC508]
 gi|170080449|ref|YP_001729769.1| DNase [Escherichia coli str. K-12 substr. DH10B]
 gi|170684095|ref|YP_001742893.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli SMS-3-5]
 gi|191169284|ref|ZP_03031034.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli B7A]
 gi|193064436|ref|ZP_03045517.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E22]
 gi|193069403|ref|ZP_03050358.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E110019]
 gi|194428175|ref|ZP_03060718.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli B171]
 gi|194433120|ref|ZP_03065402.1| endonuclease/exonuclease/phosphatase family protein [Shigella
           dysenteriae 1012]
 gi|209918036|ref|YP_002292120.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE11]
 gi|215485878|ref|YP_002328309.1| predicted DNase [Escherichia coli O127:H6 str. E2348/69]
 gi|217324324|ref|ZP_03440408.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|218553374|ref|YP_002386287.1| putative metal-dependent hydrolase [Escherichia coli IAI1]
 gi|218557695|ref|YP_002390608.1| metal-dependent hydrolase [Escherichia coli S88]
 gi|218688576|ref|YP_002396788.1| putative metal-dependent hydrolase [Escherichia coli ED1a]
 gi|218694264|ref|YP_002401931.1| putative metal-dependent hydrolase [Escherichia coli 55989]
 gi|218704168|ref|YP_002411687.1| putative metal-dependent hydrolase [Escherichia coli UMN026]
 gi|227884248|ref|ZP_04002053.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 83972]
 gi|237707251|ref|ZP_04537732.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|238900049|ref|YP_002925845.1| putative DNase [Escherichia coli BW2952]
 gi|256021140|ref|ZP_05435005.1| putative DNase [Shigella sp. D9]
 gi|256023614|ref|ZP_05437479.1| putative DNase [Escherichia sp. 4_1_40B]
 gi|260843033|ref|YP_003220811.1| putative DNase [Escherichia coli O103:H2 str. 12009]
 gi|260866957|ref|YP_003233359.1| putative DNase [Escherichia coli O111:H- str. 11128]
 gi|261225437|ref|ZP_05939718.1| putative DNase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258594|ref|ZP_05951127.1| putative DNase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281787|ref|YP_003498605.1| hypothetical protein G2583_1018 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404090|ref|ZP_06648084.1| ybhP protein [Escherichia coli FVEC1412]
 gi|293409167|ref|ZP_06652743.1| ybhP protein [Escherichia coli B354]
 gi|293414069|ref|ZP_06656718.1| ybhP protein [Escherichia coli B185]
 gi|293433051|ref|ZP_06661479.1| ybhP protein [Escherichia coli B088]
 gi|298379871|ref|ZP_06989476.1| ybhP protein [Escherichia coli FVEC1302]
 gi|300816436|ref|ZP_07096658.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 107-1]
 gi|300898278|ref|ZP_07116629.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 198-1]
 gi|300907118|ref|ZP_07124784.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 84-1]
 gi|300920037|ref|ZP_07136496.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 115-1]
 gi|300993265|ref|ZP_07180312.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 45-1]
 gi|301020719|ref|ZP_07184787.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 69-1]
 gi|301024514|ref|ZP_07188190.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 196-1]
 gi|301051290|ref|ZP_07198116.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 185-1]
 gi|301306923|ref|ZP_07212967.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 124-1]
 gi|307137414|ref|ZP_07496770.1| hypothetical protein EcolH7_04690 [Escherichia coli H736]
 gi|307313800|ref|ZP_07593417.1| Endonuclease/exonuclease/phosphatase [Escherichia coli W]
 gi|309797967|ref|ZP_07692346.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 145-7]
 gi|312969189|ref|ZP_07783396.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 2362-75]
 gi|331641303|ref|ZP_08342438.1| putative cytoplasmic protein [Escherichia coli H736]
 gi|331646007|ref|ZP_08347110.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|331651793|ref|ZP_08352812.1| putative cytoplasmic protein [Escherichia coli M718]
 gi|331656807|ref|ZP_08357769.1| putative cytoplasmic protein [Escherichia coli TA206]
 gi|331672300|ref|ZP_08373091.1| putative cytoplasmic protein [Escherichia coli TA280]
 gi|332282366|ref|ZP_08394779.1| conserved hypothetical protein [Shigella sp. D9]
 gi|77416769|sp|P0AAW3|YBHP_ECO57 RecName: Full=Uncharacterized protein ybhP
 gi|77416770|sp|P0AAW2|YBHP_ECOL6 RecName: Full=Uncharacterized protein ybhP
 gi|77416771|sp|P0AAW1|YBHP_ECOLI RecName: Full=Uncharacterized protein ybhP
 gi|77416772|sp|P0AAW4|YBHP_SHIFL RecName: Full=Uncharacterized protein ybhP
 gi|12513779|gb|AAG55161.1|AE005259_12 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|26107162|gb|AAN79346.1|AE016757_250 Hypothetical protein ybhP [Escherichia coli CFT073]
 gi|1787008|gb|AAC73877.1| conserved protein, endo/exonuclease/phosphatase family PFAM PF03372
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062347|dbj|BAA35449.1| predicted DNase [Escherichia coli str. K12 substr. W3110]
 gi|13360327|dbj|BAB34291.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|24050995|gb|AAN42375.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30040520|gb|AAP16252.1| hypothetical protein S0781 [Shigella flexneri 2a str. 2457T]
 gi|73854810|gb|AAZ87517.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|91071396|gb|ABE06277.1| putative DNase [Escherichia coli UTI89]
 gi|110614339|gb|ABF03006.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|169888284|gb|ACB01991.1| predicted DNase [Escherichia coli str. K-12 substr. DH10B]
 gi|170521813|gb|ACB19991.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli SMS-3-5]
 gi|189365678|gb|EDU84094.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4501]
 gi|189373043|gb|EDU91459.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC869]
 gi|189377721|gb|EDU96137.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC508]
 gi|190900673|gb|EDV60472.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli B7A]
 gi|192928898|gb|EDV82511.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E22]
 gi|192957356|gb|EDV87804.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E110019]
 gi|194413735|gb|EDX30014.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli B171]
 gi|194418617|gb|EDX34704.1| endonuclease/exonuclease/phosphatase family protein [Shigella
           dysenteriae 1012]
 gi|209775978|gb|ACI86301.1| hypothetical protein ECs0868 [Escherichia coli]
 gi|209775980|gb|ACI86302.1| hypothetical protein ECs0868 [Escherichia coli]
 gi|209775982|gb|ACI86303.1| hypothetical protein ECs0868 [Escherichia coli]
 gi|209775984|gb|ACI86304.1| hypothetical protein ECs0868 [Escherichia coli]
 gi|209911295|dbj|BAG76369.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE11]
 gi|215263950|emb|CAS08290.1| predicted DNase [Escherichia coli O127:H6 str. E2348/69]
 gi|217320545|gb|EEC28969.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|218350996|emb|CAU96700.1| putative metal-dependent hydrolase [Escherichia coli 55989]
 gi|218360142|emb|CAQ97691.1| putative metal-dependent hydrolase [Escherichia coli IAI1]
 gi|218364464|emb|CAR02146.1| putative metal-dependent hydrolase [Escherichia coli S88]
 gi|218426140|emb|CAR06960.1| putative metal-dependent hydrolase [Escherichia coli ED1a]
 gi|218431265|emb|CAR12143.1| putative metal-dependent hydrolase [Escherichia coli UMN026]
 gi|222032521|emb|CAP75260.1| Uncharacterized protein ybhP [Escherichia coli LF82]
 gi|226898461|gb|EEH84720.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227839000|gb|EEJ49466.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 83972]
 gi|238862335|gb|ACR64333.1| predicted DNase [Escherichia coli BW2952]
 gi|257758180|dbj|BAI29677.1| predicted DNase [Escherichia coli O103:H2 str. 12009]
 gi|257763313|dbj|BAI34808.1| predicted DNase [Escherichia coli O111:H- str. 11128]
 gi|260450063|gb|ACX40485.1| Endonuclease/exonuclease/phosphatase [Escherichia coli DH1]
 gi|281600115|gb|ADA73099.1| Metal-dependent hydrolase [Shigella flexneri 2002017]
 gi|284920642|emb|CBG33705.1| putative endonuclease/exonuclease/phosphatase [Escherichia coli
           042]
 gi|290761660|gb|ADD55621.1| hypothetical protein G2583_1018 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291323870|gb|EFE63292.1| ybhP protein [Escherichia coli B088]
 gi|291428676|gb|EFF01701.1| ybhP protein [Escherichia coli FVEC1412]
 gi|291434127|gb|EFF07100.1| ybhP protein [Escherichia coli B185]
 gi|291469635|gb|EFF12119.1| ybhP protein [Escherichia coli B354]
 gi|294491262|gb|ADE90018.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli IHE3034]
 gi|298279569|gb|EFI21077.1| ybhP protein [Escherichia coli FVEC1302]
 gi|299880367|gb|EFI88578.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 196-1]
 gi|300297049|gb|EFJ53434.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 185-1]
 gi|300358067|gb|EFJ73937.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 198-1]
 gi|300398530|gb|EFJ82068.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 69-1]
 gi|300401163|gb|EFJ84701.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 84-1]
 gi|300406673|gb|EFJ90211.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 45-1]
 gi|300412984|gb|EFJ96294.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 115-1]
 gi|300531126|gb|EFK52188.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 107-1]
 gi|300837849|gb|EFK65609.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 124-1]
 gi|306906440|gb|EFN36954.1| Endonuclease/exonuclease/phosphatase [Escherichia coli W]
 gi|307552635|gb|ADN45410.1| endonuclease/exonuclease/phosphatase family [Escherichia coli ABU
           83972]
 gi|307627800|gb|ADN72104.1| hypothetical protein UM146_13695 [Escherichia coli UM146]
 gi|308118455|gb|EFO55717.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 145-7]
 gi|309701068|emb|CBJ00366.1| putative endonuclease/exonuclease/phosphatase [Escherichia coli
           ETEC H10407]
 gi|312286591|gb|EFR14504.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 2362-75]
 gi|312945308|gb|ADR26135.1| putative DNase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313650312|gb|EFS14724.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri 2a str. 2457T]
 gi|315060026|gb|ADT74353.1| predicted DNase [Escherichia coli W]
 gi|315135440|dbj|BAJ42599.1| hypothetical protein ECDH1ME8569_0743 [Escherichia coli DH1]
 gi|315257776|gb|EFU37744.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 85-1]
 gi|315287185|gb|EFU46597.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 110-3]
 gi|315292598|gb|EFU51950.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 153-1]
 gi|315619791|gb|EFV00310.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 3431]
 gi|320178501|gb|EFW53466.1| Endonuclease/Exonuclease/phosphatase family protein [Shigella
           boydii ATCC 9905]
 gi|320192735|gb|EFW67376.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC1212]
 gi|320196715|gb|EFW71338.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli WV_060327]
 gi|320637652|gb|EFX07444.1| hypothetical protein ECO5101_22645 [Escherichia coli O157:H7 str.
           G5101]
 gi|320642778|gb|EFX11979.1| hypothetical protein ECO9389_02401 [Escherichia coli O157:H- str.
           493-89]
 gi|320648234|gb|EFX16889.1| hypothetical protein ECO2687_18506 [Escherichia coli O157:H- str. H
           2687]
 gi|320659694|gb|EFX27250.1| hypothetical protein ECO5905_24328 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664164|gb|EFX31315.1| hypothetical protein ECOSU61_00998 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323159720|gb|EFZ45698.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli E128010]
 gi|323165708|gb|EFZ51494.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           sonnei 53G]
 gi|323172094|gb|EFZ57733.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli LT-68]
 gi|323175592|gb|EFZ61187.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 1180]
 gi|323185054|gb|EFZ70420.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 1357]
 gi|323190916|gb|EFZ76183.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli RN587/1]
 gi|323379415|gb|ADX51683.1| Endonuclease/exonuclease/phosphatase [Escherichia coli KO11]
 gi|323938145|gb|EGB34405.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E1520]
 gi|323942663|gb|EGB38828.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E482]
 gi|323947052|gb|EGB43065.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H120]
 gi|323953547|gb|EGB49413.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H252]
 gi|323958079|gb|EGB53788.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H263]
 gi|323971955|gb|EGB67176.1| endonuclease/Exonuclease/phosphatase [Escherichia coli TA007]
 gi|324009624|gb|EGB78843.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 57-2]
 gi|324018520|gb|EGB87739.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 117-3]
 gi|324116214|gb|EGC10136.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E1167]
 gi|326338324|gb|EGD62153.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. 1125]
 gi|326346302|gb|EGD70040.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. 1044]
 gi|330910533|gb|EGH39043.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli AA86]
 gi|331038101|gb|EGI10321.1| putative cytoplasmic protein [Escherichia coli H736]
 gi|331044759|gb|EGI16886.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|331050071|gb|EGI22129.1| putative cytoplasmic protein [Escherichia coli M718]
 gi|331055055|gb|EGI27064.1| putative cytoplasmic protein [Escherichia coli TA206]
 gi|331070495|gb|EGI41859.1| putative cytoplasmic protein [Escherichia coli TA280]
 gi|332091084|gb|EGI96174.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           dysenteriae 155-74]
 gi|332104718|gb|EGJ08064.1| conserved hypothetical protein [Shigella sp. D9]
 gi|332759689|gb|EGJ89992.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri 4343-70]
 gi|332760512|gb|EGJ90801.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri 2747-71]
 gi|332763280|gb|EGJ93522.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri K-671]
 gi|332767952|gb|EGJ98138.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri 2930-71]
 gi|333006910|gb|EGK26406.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri VA-6]
 gi|333007139|gb|EGK26631.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri K-218]
 gi|333021184|gb|EGK40440.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri K-304]
          Length = 253

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|319954283|ref|YP_004165550.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
 gi|319422943|gb|ADV50052.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
          Length = 339

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 95/323 (29%), Gaps = 70/323 (21%)

Query: 3   RKYVLALVFFLVPCTASVA-------------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           ++ + +    LV   +  +               + ++++N+ + ++   +        +
Sbjct: 66  KRALFSFFVLLVSYVSLSSFFKLRFSNPTDTTADLSVMTFNVRSFNKNMNI--------K 117

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
            T+ +    +     D DI+  QE               +      +           N 
Sbjct: 118 NTAVFEETLELITTEDPDIICFQEF-------------YYKKQKDFKNYKYMYLEYIKNP 164

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +    K   + +       + ++        A  + + +    + V ++HL+S   
Sbjct: 165 GKVKLGFYSKYPIINKGLINFPESPNN--------AAFVDIVVKNDTVRVYNLHLESLRV 216

Query: 170 LDSLENTYSPSCSLLSQQAQ--------WLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           +   +         L ++            +     K +S    +I GDFN         
Sbjct: 217 IPDKDIIAQEESKKLYRRLTNSFKKQQQQAQIIKEHKDKSPYRAIICGDFNGT-----QY 271

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
            + +KTI  +       K               + ID+ ++              E  +N
Sbjct: 272 SNVYKTIRGDMQDTFQEKGSGYG-RTYNFRYYPVRIDFILV--------------EDSFN 316

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
               K+   +LSDH P+   ++F
Sbjct: 317 VLSHKNYNVKLSDHFPVMTSFNF 339


>gi|311894312|dbj|BAJ26720.1| hypothetical protein KSE_08830 [Kitasatospora setae KM-6054]
          Length = 325

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 102/324 (31%), Gaps = 40/324 (12%)

Query: 6   VLALVFFLVPCTASVAQ---------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           VLA+   L+  T ++A           + ++S+N   +S      L+ N  +   +    
Sbjct: 12  VLAIAASLLTSTQTLAHAETAPAAVAPLDVLSYNTFLMSTS----LYPNWGQAQRAQAIA 67

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY--------STERLINHSKRDSNN 108
              + +    D+V LQE     A   +  K +    Y        ++             
Sbjct: 68  GADFFQGH--DVVVLQEAFDNAASDALAAKASAAYPYRTPVVGRSTSGWDATSGGYSGAT 125

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
                + +  +   + ++ Y    A  S   + N+      +++NG+   V+  HL+S  
Sbjct: 126 PEDGGVLLLSRWPILRKEQYVFKDACGSDRWS-NKGFAYAEIDVNGQLTHVVGTHLQS-- 182

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                      +  + ++Q + ++ ++   +  +  P V+AGD N   +           
Sbjct: 183 --TDPGCASGQAADVRARQLRAVRAFLDAKRIPAGEPVVLAGDLNIDSHGGEYPALLANG 240

Query: 228 IDPNDSLIRFPKEKDSRCNA----NKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                +            +      +     K  +DY +   +  +     +     ++ 
Sbjct: 241 GLAPATARTGWANSFDPADNSIAAYRYPGEPKEDLDYVLYRADHARPQQYANTVHRFHSA 300

Query: 283 DDIKSRGKR------LSDHCPISI 300
               S          LSDH P+  
Sbjct: 301 PWTVSSWGTSYTYTDLSDHYPLLA 324


>gi|282855240|ref|ZP_06264572.1| exodeoxyribonuclease III [Propionibacterium acnes J139]
 gi|282581828|gb|EFB87213.1| exodeoxyribonuclease III [Propionibacterium acnes J139]
 gi|314924052|gb|EFS87883.1| exodeoxyribonuclease III [Propionibacterium acnes HL001PA1]
 gi|314965024|gb|EFT09123.1| exodeoxyribonuclease III [Propionibacterium acnes HL082PA2]
 gi|314983099|gb|EFT27191.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA3]
 gi|315090643|gb|EFT62619.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA4]
 gi|315093843|gb|EFT65819.1| exodeoxyribonuclease III [Propionibacterium acnes HL060PA1]
 gi|327326466|gb|EGE68255.1| exodeoxyribonuclease III [Propionibacterium acnes HL103PA1]
          Length = 297

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 77/320 (24%), Gaps = 64/320 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+NIN +                        ++ +  D D++ LQE+    A   +
Sbjct: 1   MRIASFNINGIRAALKRGF---------------SEWMEARDCDVIGLQEVRCRPA--DL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSR--- 139
                     S        +        TA A VR     ++             +    
Sbjct: 44  PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMTPGQAPTPAQVLTGNTN 103

Query: 140 -------AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                          + V++    + V  ++L      D                    +
Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKAIAKQDRKMAFLAGFR 163

Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232
           D +     +       F++ GDFN                           F   + P+ 
Sbjct: 164 DHLVRRRQECTAQGRHFLVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDT 223

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +     +             +           IDY +         I           D
Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITSEI-------D 276

Query: 284 DIKSRGKRLSDHCPISIDYD 303
              S  +R SDH  + IDYD
Sbjct: 277 RDPSYSERTSDHAAVVIDYD 296


>gi|291546831|emb|CBL19939.1| exodeoxyribonuclease III [Ruminococcus sp. SR1/5]
          Length = 251

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 78/306 (25%), Gaps = 82/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +         +                   LDADI  LQE        K+
Sbjct: 1   MKFISWNVNGIRACITKGFEER---------------FHELDADIFCLQETKCQQGQVKL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                                    R    
Sbjct: 46  -ELPGYHQYWNYANRRGYSGTAIFTK-----------------------------REPLS 75

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201
            A  + +E + K+  V+ +    + F+             L  + +W +D++    +   
Sbjct: 76  AAYGIGIEEHDKEGRVITLEFDEYYFVTVYTPNSQSELRRLEYRMKWEEDFLAYLLKLQE 135

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P +  GD N                           +     +  +  F      +  
Sbjct: 136 KKPVICCGDLNVAHQEIDLKNPKTNRKNAGFTDEERACFTRALESGFIDTFRYFYPDKEG 195

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF++  +  + L                      SDHCP
Sbjct: 196 VYSWWSYRFRAREKNAGWRIDYFLVSPSLKEKLQDAKIH-----------GEIMGSDHCP 244

Query: 298 ISIDYD 303
           + +D D
Sbjct: 245 VELDID 250


>gi|166367334|ref|YP_001659607.1| hypothetical protein MAE_45930 [Microcystis aeruginosa NIES-843]
 gi|166089707|dbj|BAG04415.1| hypothetical protein MAE_45930 [Microcystis aeruginosa NIES-843]
          Length = 260

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 77/286 (26%), Gaps = 34/286 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+  +S+NI           W             +     +   DI+  QE  +   +  
Sbjct: 2   KLTAMSFNIRYDKPDPDEGNW-------RVRREAVAALIAHYSPDIIGTQEARANQLLDL 54

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA-KDSFSRAG 141
                 +    S  R     +  +     + +   +     L ++  ++G+  +++    
Sbjct: 55  HRLLPKYQSLGSDRRRTGLDEHCAILYQPSRLKCLEIYEFWLSETPDVIGSITEAWGNPY 114

Query: 142 NRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R         + G+ +   + HL  +   D  ++  +        Q    KD++     
Sbjct: 115 PRMVTGAKFRTLEGQTLQFYNTHLDYYS--DQAKDLGAKCIQERFCQLDLTKDYL----- 167

Query: 201 SLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 + GDFN     L            I   D+L      +    N   +      I
Sbjct: 168 -----FLTGDFNVNSQQLPRQILTQPLQPEIKLKDALADLELAEQMSFNNYTDTPYLA-I 221

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D    D                   D  +      SDH P+   + 
Sbjct: 222 DTIYYDSRL---------QLDWAKVDPSRWLNLIPSDHYPVIAAFT 258


>gi|13471939|ref|NP_103506.1| exonuclease [Mesorhizobium loti MAFF303099]
 gi|14022683|dbj|BAB49292.1| probable exonuclease [Mesorhizobium loti MAFF303099]
          Length = 256

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 82/302 (27%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L ++NIN ++                     L  +      D+V LQE+ + +     
Sbjct: 1   MKLATFNINNINS----------------RLENLLAWLAAAKPDVVCLQELKARD----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  +       + P+L          +R
Sbjct: 40  -----MQFPRTALADAGYGAVWKGEPTWNGVAILAR------GAEPVLTRDALPGDDADR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           ++  +   ++G  I +  ++  +       +  Y  +          L+    Q  ++ +
Sbjct: 89  QSRYIEAAVDG--IVIACLYAPNGNPQPGPKFQYKLAWHAR------LEAHAAQLLDTGL 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                           +  +     +    K         
Sbjct: 141 PVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRAAFAALIEQGWVDALRKIYPKETLYT 200

Query: 249 KNLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+ ++ +   + L            D         SDH P+ +
Sbjct: 201 FWDYRRNRWPRDAGLRLDHILLSKTLARRLKGAGI-------DRDVRGEDGASDHAPVWV 253

Query: 301 DY 302
           + 
Sbjct: 254 EL 255


>gi|326330755|ref|ZP_08197057.1| endonuclease/exonuclease/phosphatase family protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325951438|gb|EGD43476.1| endonuclease/exonuclease/phosphatase family protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 332

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 79/284 (27%), Gaps = 59/284 (20%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +V +K+ ++++NI       G                 +    +   AD+V LQE+    
Sbjct: 100 AVPRKLTVMTFNIKGGRVSPGE-------------LDGIAGVIRGSGADVVLLQEVDRNR 146

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             +    +      +   + +  +     +      A+  +       +  L  +     
Sbjct: 147 RRSGNVDQPAIIASHLGMQAVFGANDYITDRGGYGNAILSRFPIAESGNTHLPNSDG--- 203

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  +   + + G+++ V + HL               S SL   Q   +   +   
Sbjct: 204 -KEQRGVLRANIIVEGQRLVVFNTHLDHT------------SDSLRQAQIGAVMSRVNAY 250

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    ++ GD N                             D+  +   +      +D
Sbjct: 251 DGAK---LLGGDLNAGSGSGVLGTALASL-------------TDAGASLGASHDGGGRVD 294

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y +       +L   +                 LSDH  +SID+
Sbjct: 295 YLL----PNSWLEAGAGRVTPT----------GLSDHHAVSIDF 324


>gi|319948313|ref|ZP_08022460.1| exodeoxyribonuclease III [Dietzia cinnamea P4]
 gi|319438033|gb|EFV93006.1| exodeoxyribonuclease III [Dietzia cinnamea P4]
          Length = 266

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 70/305 (22%), Gaps = 64/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  +    D D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRARKDRVLAWLDRSDVDVLAMQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R + +            +AV  +      +               ++
Sbjct: 41  ------QFPEEDFRELGYEVAHHGLSQWNGVAVASRVGLEDVRLGFDGMPGFHKDPEQSQ 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS--CSLLSQQAQWLKDWITQKKES 201
                 +      + V  +++ +   L     TY       L    A  L        + 
Sbjct: 95  DPEARAISAVCDGVRVYSLYVPNGRELSDPHYTYKLEWLARLRDHAAAEL------VADP 148

Query: 202 LVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNA 247
                + GD+N         D                              +E       
Sbjct: 149 DAQVALVGDWNVAPLDEDVWDMEVFEGKTHVSGPERLAVAAFDGAGFREVTREYTPGPGV 208

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + ID+ +        +            D  + +GK  SDH P+
Sbjct: 209 YTYWDYTGLSFPKRKGMRIDFQLHSPALAARVTGAFI-------DREERKGKGASDHAPV 261

Query: 299 SIDYD 303
            ++ D
Sbjct: 262 VVELD 266


>gi|262041126|ref|ZP_06014344.1| endonuclease/exonuclease/phosphatase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041576|gb|EEW42629.1| endonuclease/exonuclease/phosphatase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 253

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 80/291 (27%), Gaps = 49/291 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    + +++ N +                        LR   +++ +DIV LQE+   
Sbjct: 4   PTAGFSLNVLTINTHKGFTAFNRRF----------ILPELRDAVRSVSSDIVCLQEVMGA 53

Query: 78  NAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           + V  +    +P  T   F +     +++        + H   AV  +            
Sbjct: 54  HEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----YYE 108

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               S      R  +   +      I +  I +      D               Q   L
Sbjct: 109 NRDISVGNGEKRGLLYCRIVPPRSGITIHVICVHLGLRADQ-----------RQAQLTML 157

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            +W+     +  P V+AGDFN               ++       F + +          
Sbjct: 158 AEWVNT-LPAGEPVVVAGDFNDWRQQANQPLKAQAGLEE-----IFTRARGRPARTFPVS 211

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + +D   +           +  +            + LSDH P+S++ 
Sbjct: 212 FPLLRLDRIYVKNAHASRPKALALKQ-----------WRHLSDHAPLSVEI 251


>gi|294811940|ref|ZP_06770583.1| Large secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|326440328|ref|ZP_08215062.1| large secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|294324539|gb|EFG06182.1| Large secreted protein [Streptomyces clavuligerus ATCC 27064]
          Length = 628

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/325 (11%), Positives = 83/325 (25%), Gaps = 66/325 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              + ++ + ++N+  L   +  + + +  K    +             DIV L+E+   
Sbjct: 318 PHRSGELAVATYNVENLDPTDPQTKFDSLAKAVVENLA---------SPDIVALEEIQDN 368

Query: 78  NAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           N                     V        + S     N    +   +I        + 
Sbjct: 369 NGKKNDGVVAADETVRKFTDAIVAAGGPAYEWRSISPENNKDGGEPGGNIRQVFLFNPER 428

Query: 121 VRVLQQSY----------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
           V    ++                       P      + +   +R+ +       G+ ++
Sbjct: 429 VSFTDRAGGDATTPTDVTSTRRGGAALTLSPGRVDPANPAWESSRKPLAAEFSFRGETVF 488

Query: 159 VLDIHLKSFCFLD----SLENTYSPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFN 212
           V+  H  S    +      +     S     QQAQ +  ++ +  ++      ++ GD N
Sbjct: 489 VIANHFGSKGGDEGLTAHRQPPNRSSEVKRLQQAQSVNAFVKKILKADRRADVLVVGDIN 548

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                           D                 +     N   +D  +   +   F   
Sbjct: 549 DFEFSAT----TQALTDGGALYPAVKSLPRKDRYSYVFQGNSQVLDQILTSPSIRNFSYD 604

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCP 297
                  +++ +        SDH P
Sbjct: 605 SVHINAEFSDQN--------SDHDP 621


>gi|254391934|ref|ZP_05007127.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197705614|gb|EDY51426.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 627

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/325 (11%), Positives = 83/325 (25%), Gaps = 66/325 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              + ++ + ++N+  L   +  + + +  K    +             DIV L+E+   
Sbjct: 317 PHRSGELAVATYNVENLDPTDPQTKFDSLAKAVVENLA---------SPDIVALEEIQDN 367

Query: 78  NAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           N                     V        + S     N    +   +I        + 
Sbjct: 368 NGKKNDGVVAADETVRKFTDAIVAAGGPAYEWRSISPENNKDGGEPGGNIRQVFLFNPER 427

Query: 121 VRVLQQSY----------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
           V    ++                       P      + +   +R+ +       G+ ++
Sbjct: 428 VSFTDRAGGDATTPTDVTSTRRGGAALTLSPGRVDPANPAWESSRKPLAAEFSFRGETVF 487

Query: 159 VLDIHLKSFCFLD----SLENTYSPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFN 212
           V+  H  S    +      +     S     QQAQ +  ++ +  ++      ++ GD N
Sbjct: 488 VIANHFGSKGGDEGLTAHRQPPNRSSEVKRLQQAQSVNAFVKKILKADRRADVLVVGDIN 547

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                           D                 +     N   +D  +   +   F   
Sbjct: 548 DFEFSAT----TQALTDGGALYPAVKSLPRKDRYSYVFQGNSQVLDQILTSPSIRNFSYD 603

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCP 297
                  +++ +        SDH P
Sbjct: 604 SVHINAEFSDQN--------SDHDP 620


>gi|260061504|ref|YP_003194584.1| hypothetical protein RB2501_07885 [Robiginitalea biformata
           HTCC2501]
 gi|88785636|gb|EAR16805.1| hypothetical protein RB2501_07885 [Robiginitalea biformata
           HTCC2501]
          Length = 387

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 80/318 (25%), Gaps = 49/318 (15%)

Query: 25  RLVSWNINTLSEQEGV-----------SLWKNSVKRTTSDYTLLRQYAKNLD-------A 66
            L  +N+  L +                  + + +R       +     ++         
Sbjct: 58  TLAFYNVENLFDTRDDSLTADDSRTPEGEDRWTEERYRVKLRRIAGVLSDIGRETAMRSP 117

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQ 125
           D++ L E+ +   +  +          +    + H        I  A   +K     +  
Sbjct: 118 DLIGLCEVENRAVLEDLLG---QEALRTKGYGVVHYDSPDRRGIDVAFLYKKACFTPIES 174

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
            S  LL       R   R  + +   ++G+ +++   H  S     +    Y  + + L 
Sbjct: 175 ASRRLLLYDTRNRRRFTRDQLLVYGVLDGEPVYLSVNHWPSRSGGVAATEAYRRAAASL- 233

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLIRFPKE 240
            Q   L   +    +    FV  GD+N                   ++   +        
Sbjct: 234 -QRDILDSVLR--LDPNARFVSMGDYNDDPTDASIRFTLGSGSSRDSLASREFFNPMEPL 290

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLI------------------QESFSEILYNE 282
             +   +          D  + + N ++                        +    +  
Sbjct: 291 FLAGSGSLAYGDRWNLFDQLMFNGNWFRDTTGYRFWKARVFRPDYLLTSSGPYKGYPFRT 350

Query: 283 DDIKSRGKRLSDHCPISI 300
               S     SDH P+  
Sbjct: 351 YAGGSYQGGYSDHLPVYA 368


>gi|110640994|ref|YP_668722.1| hypothetical protein ECP_0804 [Escherichia coli 536]
 gi|191174511|ref|ZP_03036010.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli F11]
 gi|300992083|ref|ZP_07179785.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 200-1]
 gi|110342586|gb|ABG68823.1| hypothetical protein YbhP [Escherichia coli 536]
 gi|190905224|gb|EDV64864.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli F11]
 gi|300305412|gb|EFJ59932.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 200-1]
 gi|324011114|gb|EGB80333.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 60-1]
          Length = 253

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYLEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|319404823|emb|CBI78424.1| exodeoxyribonuclease III [Bartonella rochalimae ATCC BAA-1498]
          Length = 272

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 68/305 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WNIN                      + + QY      D++ LQE+        +FP
Sbjct: 5   IATWNIN----------------SIRLRLSQVLQYLDIFSVDMLCLQEIKCP---DDLFP 45

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +  +                S    +  +A+  +   +  +       +D          
Sbjct: 46  RQFFEAAGYQH------IALSGQKSYHGVAIISRLPFISVERCFFCQKEDCRH------- 92

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           + +++E++G+KI + + ++ +    D  +   +          + +   I   +   +  
Sbjct: 93  LSVVIELHGRKIRIHNFYVPAG--GDEPDVNKNEKFRHKLDFLEEMSS-IRADQGDGLES 149

Query: 206 VIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANK 249
           ++ GD N       + ++    K +                   +     +         
Sbjct: 150 LLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETERLQALCCEGGWVDLMRMKFPIPTKLYT 209

Query: 250 NLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               +            +D+     N   F                     + SDH P+ 
Sbjct: 210 WWSYRARDWALSDRGRRLDHIWSSPNLVPF-------VKELAIFRDTRGWPQPSDHVPVQ 262

Query: 300 IDYDF 304
             +DF
Sbjct: 263 TLFDF 267


>gi|167762826|ref|ZP_02434953.1| hypothetical protein BACSTE_01184 [Bacteroides stercoris ATCC
           43183]
 gi|167699166|gb|EDS15745.1| hypothetical protein BACSTE_01184 [Bacteroides stercoris ATCC
           43183]
          Length = 266

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 79/304 (25%), Gaps = 73/304 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++++N+N L       L                ++      D++ LQE         
Sbjct: 12  EMKIITYNVNGLRAAVSKGLP---------------EWLAKEQPDVLCLQETK------- 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +           H    +    ++ +A+  K        Y   G       +  
Sbjct: 50  -LQPEQYPAEALDALGYRHYLHSARKKGYSGVAILTKREP----DYVEYGMGMEEYDSEG 104

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      V  +   + V+ ++  S    D  +           + A  L         + 
Sbjct: 105 RF-----VRADYGDLSVVSVYHPSGTSGDERQAFKMEWLEHFRRYAVELLR-------TR 152

Query: 203 VPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              V+ GD+N     +  +D                W T   N+  I   +         
Sbjct: 153 PKLVLCGDYNICHEAIDIHDPVRNATNSGFLPEEREWMTRFLNEGFIDTFRLLHPDSREY 212

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY +  +     L +        +           SDHCP+ 
Sbjct: 213 TWWSYRFNSRAKNKGWRIDYCMASEAVRPMLKEARILNDAVH-----------SDHCPMM 261

Query: 300 IDYD 303
           ++  
Sbjct: 262 LELT 265


>gi|209548989|ref|YP_002280906.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534745|gb|ACI54680.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 263

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 84/303 (27%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ K    D+V LQE+ + +A    
Sbjct: 1   MKIATYNVNGING----------------RLAILLRWLKEDAPDVVCLQELKTDDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  K+   +     L G  D      +R
Sbjct: 41  ------GFPRKEIERSGYGAVWHGQRSWNGVAILAKDKTPILTRRGLPGDPDDSH---SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++       I +  ++L +       +  Y        +  + L D+  +     V
Sbjct: 92  YIEAVI-----DGIVIGCLYLPNGNPFPGAKFDYK------LRWFRRLHDYAAELLALEV 140

Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P ++AGDFN                  +   +                 +          
Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKAYAHLVGQGWTDAVRHLHPHERIYT 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +             ID+F++      +L   +               +  SDH P+ I
Sbjct: 201 FWKYWRNSFERDAGLRIDHFLLSPAVAPWLRSATVR-------RKPRGWEHTSDHAPVMI 253

Query: 301 DYD 303
           + D
Sbjct: 254 ELD 256


>gi|27806969|ref|NP_776959.1| deoxyribonuclease-1 precursor [Bos taurus]
 gi|6015029|sp|P00639|DNAS1_BOVIN RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I; Flags: Precursor
 gi|2546888|emb|CAA04819.1| pancreatic deoxyribonuclease I [Bos taurus]
 gi|148745517|gb|AAI42350.1| Deoxyribonuclease I [Bos taurus]
 gi|296473424|gb|DAA15539.1| deoxyribonuclease-1 precursor [Bos taurus]
          Length = 282

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 90/284 (31%), Gaps = 30/284 (10%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--K 82
           ++ ++NI T  E               +  + + +  +    DIV +QE+   + VA  K
Sbjct: 24  KIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVGK 72

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +          +   +++     ++         R   V VL       G +   + + +
Sbjct: 73  LLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFS 132

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +    +  K+    I        D++    S     L  Q +W  +         
Sbjct: 133 REPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN--------- 183

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              ++ GDFN   +Y+ ++      +  + +      +       + N       D  V+
Sbjct: 184 -DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIVV 238

Query: 263 DQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303
             +  +  ++  S +   +      S      +SDH P+ +   
Sbjct: 239 AGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 282


>gi|329956608|ref|ZP_08297181.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
 gi|328523980|gb|EGF51056.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
          Length = 374

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 91/312 (29%), Gaps = 64/312 (20%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
                     + ++ +S+NI   +                     +  Y K  +ADI+ L
Sbjct: 98  LNFHTANPPEESIKFLSYNIMGFNGAVKKDGKNP-----------ILTYLKESNADILCL 146

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE  S  +  ++  K+              S   S +     IA   K   +  +     
Sbjct: 147 QEYASDESPRRLTQKDI-ERELKDYPYHRISVVGSGSGYTNKIACYSKFPILSARVLNYP 205

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------------- 178
              +         +V   +++N   I +++ HL+S     + ++ Y              
Sbjct: 206 SGYN--------GSVLYELKLNEDTITLINNHLESNKLTKADKDIYEDILKAPEKEKVKS 257

Query: 179 ----------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                      + ++ + QA  +   I   +      ++ GDFN        +    + +
Sbjct: 258 GARLLVHKLAEASAIRAPQADTIAREIASSRYPS--VIVCGDFNDTPISYA-HRVIAQNL 314

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
           D       F +       +    +    ID  ++ +N   +             +    R
Sbjct: 315 DD-----AFTQSGRGLGISYNQNKFYFRIDNILISKNLQSY-------------NCTVDR 356

Query: 289 GKRLSDHCPISI 300
             + SDH PI  
Sbjct: 357 SIKESDHYPIWC 368


>gi|327287974|ref|XP_003228703.1| PREDICTED: deoxyribonuclease-1-like 2-like [Anolis carolinensis]
          Length = 277

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 102/304 (33%), Gaps = 41/304 (13%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L+ F +   A     +R+ ++NI +           ++         ++ +       
Sbjct: 4   LLLLVFGLVSLAQTVSPLRICAFNIQSFG---------DTKLSDEGTSKIIVKVLSRY-- 52

Query: 67  DIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DI  +QE+   +  AV ++  +         E  I+ S    N         R  +V V+
Sbjct: 53  DIALVQEVRDSDLSAVNELMERLNRASKEPYEFEISQSLGRENYKEMYLFIYRTSSVSVV 112

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            Q         S S A +R    L     E NGK++ ++ +H        +  +  +   
Sbjct: 113 DQ-----YQFPSKSNAFSRAPFILKFSASESNGKELILVPLH-------TAPNDAVAEID 160

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           +L     + +  W           +  GDFN   +Y+G  D     +  ++       ++
Sbjct: 161 ALYDVYLKIIDKW------GTDNMMFLGDFNADCSYVGKKDWASIRLRTSEVFKWLIPDE 214

Query: 242 DSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPI 298
           +     + +       D  V+      K++   S     + E+      +   +SDH P+
Sbjct: 215 EDTTVGHSDCAY----DRIVVSGAQMKKWVKPNSAKVFDFQEEFKLSQEKALAVSDHFPV 270

Query: 299 SIDY 302
            +  
Sbjct: 271 EVTL 274


>gi|322834267|ref|YP_004214294.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602]
 gi|321169468|gb|ADW75167.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602]
          Length = 253

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++++ N +                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SLKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVTGAHDVHS 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P      F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVESWPDTPHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            + + NR  +   +     G  + V+ +HL                 +    Q + L DW
Sbjct: 114 VAGSENRGLLYCRIVPPQLGSPVHVICVHLGLR-------------EAHRQAQLKMLADW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +        P ++AGDFN               +D       F + K             
Sbjct: 161 VNAF-PQGEPVLVAGDFNDWRQKANRPLKVQAGLDE-----IFTRAKGRPARTFPVRMPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +                           + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNANAS-----------APAVLPLRNWRHLSDHAPLSAEI 251


>gi|229493724|ref|ZP_04387508.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121]
 gi|229319393|gb|EEN85230.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121]
          Length = 266

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 71/307 (23%), Gaps = 70/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +    D D++ +QE    +     
Sbjct: 1   MRIATWNVN----------------SVRARTDRIIDWLGRSDVDVLAMQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSRAG 141
                    Y   + I +            +A+  +     V        G         
Sbjct: 41  ------QFPYERFKEIGYEVAHVGLSQWNGVAIASRVGLDDVQIGFEDQPGFDKDPEADP 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--K 199
            R A  +     G  + V  +++ +   L+     Y             L+D       +
Sbjct: 95  VREARAIGATCGG--VRVWSLYVPNGRELEDPHYAYKLD------WLAKLRDDAEGWLKQ 146

Query: 200 ESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSR 244
           +      + GD+N                           +     +             
Sbjct: 147 DPDAQIALVGDWNVAPTDDDVWDPAFFEGKTHTSEPERAAFTAFTESGFADVVRPYTPGP 206

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                ID+ +        +            D  + +GK  SDH
Sbjct: 207 -GVYTYWDYTQLRFPKKQGMRIDFILGSPAFAARVEAAEI-------DRNERKGKGASDH 258

Query: 296 CPISIDY 302
            P+ ++ 
Sbjct: 259 APVIVNL 265


>gi|33594836|ref|NP_882479.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella parapertussis 12822]
 gi|33599108|ref|NP_886668.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella bronchiseptica RB50]
 gi|33564912|emb|CAE39857.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella parapertussis]
 gi|33575154|emb|CAE30617.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella bronchiseptica RB50]
          Length = 286

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 86/322 (26%), Gaps = 83/322 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+NI+             S          LR     L  D+VFLQE+   N V+ V
Sbjct: 4   IRVVSYNIH----------KGRSALGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEVSSV 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  +      + +           A+  +   +  +         S  R   R
Sbjct: 54  LHAQHESLAAALRLQAAYGRNAIRTGTDHGNALLSRFDILDHE-----NQDISDHRLEQR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +++ G ++    +HL  F                  +Q Q L D I Q      
Sbjct: 109 GLLHARIDVGGTEVHCFVVHLGLFAGS-------------RGRQIQALTDRIRQSVPDGA 155

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243
           P +IAGDFN   + L     F + +   +     P+                        
Sbjct: 156 PLLIAGDFNDWGDRLAP--MFVQQLGLYEVFSHAPRSHGGDLPRLRDSVRRLGNVLRGVP 213

Query: 244 ----------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                                        +     +D         +     S   +   
Sbjct: 214 NSVAVLERNNQLGMGGAYCPLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR-- 266

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
                    RLSDH P+  + +
Sbjct: 267 ----GREWARLSDHSPLLAELE 284


>gi|319943026|ref|ZP_08017309.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599]
 gi|319743568|gb|EFV95972.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599]
          Length = 268

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 80/301 (26%), Gaps = 66/301 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L +WN+N+L                      +  +      D + LQE          FP
Sbjct: 3   LATWNVNSL----------------KMRLQHVLDWLAANPVDFLCLQE---TKLTDDKFP 43

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           K+             +    +    +  +A+  +           +   +       RR 
Sbjct: 44  KDE-------IEAAGYGVIFTGQPTYNGVALLYRKE--AGYVPDGVQLNNPLYEDVQRRL 94

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLV 203
           V    +     + V+  +  +   + S +  Y             L++WI Q  ++E   
Sbjct: 95  VSARFQTAAGPVRVIGAYFPNGQAVGSEKYVYK------LGWIASLQEWIAQLRREEPDT 148

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++AGDFN        +D                         L    +  +       
Sbjct: 149 GVILAGDFNIAPADADVHDPAVWADGILVSGPEREALQGLLALGLHDAFRLFEQPPKLFS 208

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID  ++       + +          D    + ++ SDH P+ +
Sbjct: 209 WWDYRALGFRRNAGLRIDLILVSDELKPMVGRCWI-------DKGPRKLEKPSDHTPVVV 261

Query: 301 D 301
           +
Sbjct: 262 E 262


>gi|163869207|ref|YP_001610459.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476]
 gi|161018906|emb|CAK02464.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476]
          Length = 271

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 86/307 (28%), Gaps = 68/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ +WNIN                        + +Y +   AD++ LQE    +A+   
Sbjct: 3   FRIATWNIN----------------SIRLRLAQVFRYLELFPADVLCLQETKCPDAL--- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     + E         S    +  +A+  +              +D        
Sbjct: 44  ------FPVEAFEAAGYKHIALSGQKSYNGVAIVSRLPFKKVNKRFFCQNQDCRY----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + ++VEI+G+ + + + ++ +    D  +   +          + +  +I   +E  +
Sbjct: 93  --ISVIVEIHGRSLRIHNFYVPAG--GDIPDAEVNEKFRHKLDFLEEMS-FIRADQEKGI 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N       + ++    K +                   +             
Sbjct: 148 SSLLLGDLNIAPLAEDVWSHQQLLKVVSHTPIETERLQGLCCQGGWIDLMRLHIPVPTKL 207

Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +   FL+  S               +R SDH P
Sbjct: 208 YTWWSYRARDWALTDYGRRLDHVWSSPDLASFLVDLS-------TFRDARGWERPSDHIP 260

Query: 298 ISIDYDF 304
           +   ++F
Sbjct: 261 VQTVFNF 267


>gi|42520813|ref|NP_966728.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410553|gb|AAS14662.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 259

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 84/305 (27%), Gaps = 72/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                        L  +  +   DIV LQE+         
Sbjct: 2   LKIATWNVN----------------SIRKRVNQLCSFIVDSQIDIVLLQEIKCTEE---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y+    + +            + V  K   + +    ++ +          
Sbjct: 42  ------QFPYAEIEKLGYEYAIYGQVARNGVCVLSKYPILEKFKIDIVESHQEARY---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +++    KI V  +++ +    DS       +     +    L + ++   ++  
Sbjct: 92  --IECVIKYTNSKIRVGSVYVPNGQSPDSH------AFEYKLKFFDNLYERMSTLLKNEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFPKEKDSRCNA 247
             +IAGD+N   + +   D     ++                 N       +        
Sbjct: 144 LTIIAGDYNIAPDEIDVFD--SNLLNGQVCFHIREREKLRAILNLGFKDAFRISHPNLQQ 201

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + IDY ++   A   L            DD   + +  SDH P+
Sbjct: 202 FTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYI-------DDRLRKLENPSDHTPV 254

Query: 299 SIDYD 303
               +
Sbjct: 255 VCAIE 259


>gi|33591896|ref|NP_879540.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella pertussis Tohama I]
 gi|33571540|emb|CAE41020.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella pertussis Tohama I]
 gi|332381313|gb|AEE66160.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella pertussis CS]
          Length = 286

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 85/322 (26%), Gaps = 83/322 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+NI+             S          LR     L  D+VFLQE+   N V+ V
Sbjct: 4   IRVVSYNIH----------KGRSALGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEVSSV 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  +      + +           A+  +   +  +         S  R   R
Sbjct: 54  LHAQHESLAAALRLQAAYGRNAIRTGTDHGNALLSRFDILDHE-----NQDISDHRLEQR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +++ G ++    +HL  F                  +Q Q L D I Q      
Sbjct: 109 GLLHARIDVGGTEVHCFVVHLGLFAGS-------------RGRQIQALTDRIRQSVPDGA 155

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243
           P +I GDFN   + L     F + +   +     P+                        
Sbjct: 156 PLLIVGDFNDWGDRLAP--MFVQQLGLYEVFSHAPRSHGGDLPRLRDSVRRLGNVLRGVP 213

Query: 244 ----------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                                        +     +D         +     S   +   
Sbjct: 214 NSVAVLERNNQLGMGGAYCPLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR-- 266

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
                    RLSDH P+  + +
Sbjct: 267 ----GREWARLSDHSPLLAELE 284


>gi|323358932|ref|YP_004225328.1| extracellular nuclease [Microbacterium testaceum StLB037]
 gi|323275303|dbj|BAJ75448.1| predicted extracellular nuclease [Microbacterium testaceum StLB037]
          Length = 1293

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/343 (11%), Positives = 86/343 (25%), Gaps = 64/343 (18%)

Query: 17  TASVAQKVRLVSWNINTLSEQEG------------------VSLWKNSVKRT-------T 51
            A V   V+L S+N+                           +       R         
Sbjct: 272 PADVGGTVQLASFNVLNYFTTTAEDVGCDSVYTDREGNPVTANRCPEPGPRGAANDENLQ 331

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSK 103
                +      ++A++V L+E+ +          A++ +       +       +    
Sbjct: 332 RQQAKIVAALNAMEAEVVSLEEIENSAALGKPRDEALSTLVDALNADLGEDAWAFVPSPT 391

Query: 104 --RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
               S + I TA   +K  V  +  S  L     + +R    +A           + +++
Sbjct: 392 ALPASEDVIRTAFIYKKAAVSPIGASVILDDPAFANARQPLAQAFAPAGSDEAAFVAIVN 451

Query: 162 IH-----LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRK 214
                         D+             +QA+ L  +  ++ +        + GDFN  
Sbjct: 452 HFKSKSDSDPAAEGDNAAGDQGAFNGDRVRQAEALVAFAGERAKTVDGGAVFLLGDFNAY 511

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                      + +             D+             +D+ +    A + +    
Sbjct: 512 AQEDPI-----QVLRDAGYADL---GADTGTYTYSFSGQSGSLDHVLASPAARELVTGTD 563

Query: 275 FSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303
              I   E                      R SDH P+ +  D
Sbjct: 564 IWNINAGEALALEYSRYNANVRSFYDASPYRSSDHDPVVVGLD 606


>gi|228995361|ref|ZP_04155046.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
 gi|228764403|gb|EEM13266.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
          Length = 354

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 109/318 (34%), Gaps = 64/318 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            ++ +  ++NI               G     +S ++T  + + +  + +  D+D + +Q
Sbjct: 54  GEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNISNMLSFLQKEDSDFILVQ 113

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-------------KK 119
           EM   +   + F  N +  F    +    +   + N     + ++              K
Sbjct: 114 EMDEKSL--RSFDVNQYKAFQDGLKDHASTFGYNFNAQWVPVPIKKPHGYTNSGLGSFSK 171

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176
                   Y L G +    +     R  VE  V + NGK + ++++HL ++    +    
Sbjct: 172 YKVEEVTRYQLPGREMWLRQLFELDRAIVEQKVPVDNGKYLRMVNVHLSAYDKGGN---- 227

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                 +  QQ ++LK+++ +  ++    V+ GD+N+ ++ +   D  +K   P   +  
Sbjct: 228 ------IRKQQVEFLKEYMNKHYKNGDYLVLGGDWNQLLSDVQLKDPKFKEEWPEWLVQL 281

Query: 237 FPKEKDSRCNANKNL----------------RNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 282 PEDFTDGGFQWAVDDTVWTVRDNVKSYVEDENFVTIIDGFLVSPN--VEIVSVQGHDLKF 339

Query: 281 NEDDIKSRGKRLSDHCPI 298
                       SDH P+
Sbjct: 340 EN----------SDHNPV 347


>gi|217977845|ref|YP_002361992.1| exodeoxyribonuclease III [Methylocella silvestris BL2]
 gi|217503221|gb|ACK50630.1| exodeoxyribonuclease III [Methylocella silvestris BL2]
          Length = 258

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 79/301 (26%), Gaps = 70/301 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N                        L +Y K    D++ LQE+   +       
Sbjct: 3   IATWNVN----------------SVRQRTGHLLRYLKEQAPDVLCLQELKCVDEA----- 41

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                  +       ++           +A+  K    +++  P     +          
Sbjct: 42  -----FPWGEVEAAGYNAAVHGQKGFNGVAILSKAPIEVKRGLPGDPTDEHARY------ 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +E ++      + V  I+L +    D+ +  Y  +          L     +      P 
Sbjct: 91  IEAVIPHKQSVVRVASIYLPNGNPPDTEKYGYKLA------WMDRLIAHARELLRLEEPL 144

Query: 206 VIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+AGD+N                           ++T+          +           
Sbjct: 145 VLAGDYNVIPAAADCADPAAWVGDALFLPQTRARFRTLLNLGLTDAL-RATTDEAGLYTF 203

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           ID+ ++   A   L+  +        D       + SDH P+ I+
Sbjct: 204 WDYQAGAWQRNKGIRIDHLLLSPGAADRLVTTTI-------DKGLRAEDKPSDHVPVRIE 256

Query: 302 Y 302
            
Sbjct: 257 L 257


>gi|313794091|gb|EFS42113.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA1]
 gi|315077107|gb|EFT49182.1| exodeoxyribonuclease III [Propionibacterium acnes HL053PA2]
 gi|327451399|gb|EGE98053.1| exodeoxyribonuclease III [Propionibacterium acnes HL092PA1]
          Length = 297

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 82/320 (25%), Gaps = 64/320 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+NIN +       L +   +R  +            D D++ LQE+    A   +
Sbjct: 1   MRIASFNINGIRA----VLKRGFSERMEAR-----------DCDVIGLQEVRCRPA--DL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGAKDSFSRA 140
                     S        +        TA A       ++ +     P      + +  
Sbjct: 44  PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTD 103

Query: 141 GNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           G    +         + V++    + V  ++L      D                    +
Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFR 163

Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232
           D +     +       F++ GDFN                           F   + P+ 
Sbjct: 164 DHLVRRRQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDT 223

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +     +             +           IDY +         I           D
Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITAEI-------D 276

Query: 284 DIKSRGKRLSDHCPISIDYD 303
              S  +R SDH  + +DYD
Sbjct: 277 RDPSYSERTSDHAAVVVDYD 296


>gi|298373415|ref|ZP_06983404.1| extracellular ribonuclease/nuclease fusion protein [Bacteroidetes
           oral taxon 274 str. F0058]
 gi|298274467|gb|EFI16019.1| extracellular ribonuclease/nuclease fusion protein [Bacteroidetes
           oral taxon 274 str. F0058]
          Length = 554

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 91/304 (29%), Gaps = 31/304 (10%)

Query: 19  SVAQKVRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
           + +  +++ S+N+   L+   G      +       +    +    +DADI  L E+   
Sbjct: 177 ANSHNLKVCSFNLEYYLTSNFGTGFGPANEVEAAKQHAKTVKALVAIDADIYGLIEIQQG 236

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +A+ K+          +    I+       +        R   V       P     + 
Sbjct: 237 QDAIRKLCNALNANKGSNVYSFIDDGGSVYGSYTKVGFIFRSDRVI------PDGNLYNV 290

Query: 137 FSRAGNRR-AVELLVEINGKKIWVLDIHLKSFCF-----LDSLENTYSPSCS-LLSQQAQ 189
            +   +R+      +  N +K+     H KS         ++ +     + +    ++A 
Sbjct: 291 NNVLPHRKKIQCFRLLSNNEKLVFSLNHFKSKTGKNATGDNADQKDGQGAFNGDRVREAN 350

Query: 190 WLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            +   I     +      +I GD N               +  N   +   K K+    +
Sbjct: 351 AVLSAIAPYSVNCGDEDVLIMGDLNSYAKEDPLY------VFYNKGYVNLLKSKNDSAYS 404

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------KRLSDHCPIS 299
                    +D+ V + +  + ++      I  +E  +             R SDH  + 
Sbjct: 405 YVYSGLSGCLDHAVANASMRRQIVDARVFHINADEPKMFEYHQSTSVGDMYRSSDHDAVV 464

Query: 300 IDYD 303
           +  D
Sbjct: 465 VALD 468


>gi|297570792|ref|YP_003696566.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931139|gb|ADH91947.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM
           20595]
          Length = 269

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 75/308 (24%), Gaps = 67/308 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    +       D D + LQE+         
Sbjct: 1   MKIATWNIN----------------SARARADRILDVLTRHDLDALALQEIKCK------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-----LLGAKDSFS 138
                     +      +       +    +A+  +      +         +  +    
Sbjct: 39  ----PEQFPAADIEAAGYEVAAHGLNQWNGVAIISRVGLEDVRREFPGQPGFVKGEPEGG 94

Query: 139 RAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           R+      E   +      I +  +++ +          Y             L+D+   
Sbjct: 95  RSFIPGPAEARAIGARVGGIDLWSLYVPNGRATGDPHYHYKLEFLRR------LRDFAEG 148

Query: 198 KKESLVP--FVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKE 240
           +          + GD+N                           +        +    + 
Sbjct: 149 QMRDDDAAQLALVGDWNVIPTDADVWDPAAMEDGIYLTEPERAAFHAFADAGMVELSRQY 208

Query: 241 -KDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             +      + LR      + IDY           I  +        D  + +GK  SDH
Sbjct: 209 ATNYTFWDYQKLRFPKNEGMRIDYVYASPALAARSIDGTI-------DRDERKGKGASDH 261

Query: 296 CPISIDYD 303
            P+ I+++
Sbjct: 262 VPVIIEFE 269


>gi|312884747|ref|ZP_07744448.1| hypothetical protein VIBC2010_19580 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367660|gb|EFP95211.1| hypothetical protein VIBC2010_19580 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 861

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/373 (11%), Positives = 93/373 (24%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G     +   R    +         + +    LDADIV L E
Sbjct: 466 GNLRVATFNVLNYFNSPYGGDQNLDGSNRGAKSFEEFERQQTKIVEALYKLDADIVGLME 525

Query: 74  MGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT---AIAVRK 118
           + +             + +        +            +  +           +  R 
Sbjct: 526 IENNGFGNNGAIAQLVDQLNDRVGFEQYTYVALDTNQDGLTNEEDFVGTDVITNGLIYRP 585

Query: 119 KNVRVLQQS------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
           +   +L               Y   G +    +   R A+    +++ +++ +   HLKS
Sbjct: 586 RIAELLSSKVIALPSQLAPPVYDEKGKQIEDGKNYQRNAIASTFKVHDEELTIAVNHLKS 645

Query: 167 --------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL---------- 202
                                ++      +     A  L + +   +             
Sbjct: 646 KGSTCWEDAASAEQGGQGREDKDKQGSCENFRVAAAVALGEALESIEGHKIIVGDLNAYG 705

Query: 203 --VPFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              P  +  D N           I+      D    I  +   +           +    
Sbjct: 706 MEDPVRVLTDLNGGSVKAARNTYIDGEPQFGDEGAVITKSYGYLNAVAINHQNSWSYSYN 765

Query: 252 RNKIPIDYFVMDQNAYK--------FLIQESFSEILYNEDDIKSR-------------GK 290
                +D+ +M  + YK          +  +   I   E  +                  
Sbjct: 766 DEVGALDHILMSPSLYKKEGFLQQRRFVDATDWHINGGESKLFDYTDKFKGDLPKYNDHF 825

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 826 RASDHDPAVLELN 838


>gi|289625360|ref|ZP_06458314.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289647509|ref|ZP_06478852.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330867768|gb|EGH02477.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330875589|gb|EGH09738.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|331011241|gb|EGH91297.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 261

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 83/295 (28%), Gaps = 51/295 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               S +  + +++ N++                        LR+  + + ADIVFLQE+
Sbjct: 11  ATPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEV 60

Query: 75  --GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                +    V    T   +     S      + +     D     A+  K   +  ++ 
Sbjct: 61  HGEHQSHARSVKDWPTISQYEFLADSMWNDFAYGRNAVYPDGDHGNALLSKYPIIQHENL 120

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            +     S      R  +  ++E+      V  + +                 S   QQ 
Sbjct: 121 DI-----SIHGTEQRGLLHCILEVPYAG-RVHAVCVHLGLR-----------ESHRRQQL 163

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L + + +      P ++AGDFN               ++       F +   +   + 
Sbjct: 164 NLLAELMER-LPEGEPVIVAGDFNDWRQRAD------ALLEGTGLHEVFVERFGAPAKSF 216

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 + +D   +           S                 LSDH P++++  
Sbjct: 217 PARWPLLRLDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 260


>gi|240850841|ref|YP_002972241.1| exodeoxyribonuclease III [Bartonella grahamii as4aup]
 gi|240267964|gb|ACS51552.1| exodeoxyribonuclease III [Bartonella grahamii as4aup]
          Length = 260

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 85/302 (28%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNI                    + +  L Q+ +    DIV LQE+ S +     
Sbjct: 1   MKIATWNIAG----------------IKARHETLCQWLQQSQPDIVCLQEIKSIDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------NFPRDAIENLGYHIETHGQKSFNGVAILSKKTPDEVIRRLPGNDNDEQTRY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   N   + V  ++L +   ++S + +Y           + L            
Sbjct: 92  --IEAVYSTNKGVVRVASLYLPNGNPIESEKYSYKIE------WMERLYTHAKSLLAYEE 143

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N     L                     ++ I             D+   + 
Sbjct: 144 PLILAGDYNVIPAPLDAKKPQEWYQDALFLQETRKVFQRILNLGLYDAIRNVTDTPSFSF 203

Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +         N I ID+ ++   A   L       I  +        ++ SDH P+ I 
Sbjct: 204 WDFQAGAWPKNNGIRIDHLLLSPEAVDQL-------ICAHSQTEVRGYQKPSDHVPVWIH 256

Query: 302 YD 303
            +
Sbjct: 257 LN 258


>gi|239917012|ref|YP_002956570.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
 gi|239838219|gb|ACS30016.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
          Length = 308

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 81/315 (25%), Gaps = 59/315 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                    VR+ + N+N +                      +R++      D++ LQE+
Sbjct: 28  AGAPKADGAVRVATVNVNGIRAS---------------HRKGMREWFAGRGVDVLTLQEV 72

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               A A V  +    I       ++ +   +       +A+  +      ++   +   
Sbjct: 73  ---RAPADVTAQLVSEIVGEDWDEVHLADAVAAAKGRAGVAIASRFPLGEVRTG--IADA 127

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D +     R     L   +G  + V+  ++ S       +                +   
Sbjct: 128 DGYFDDAGRWIEADLRLPDGSPLTVVSAYVHSGEVDTPKQVDKYR-------FLDEMVRR 180

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
           +++        ++ GD N     L   +                 F +            
Sbjct: 181 LSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKAGFLPEERAYFDRFFGELGFTDVHR 240

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                          +           IDY +   +  +              D   S G
Sbjct: 241 ALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATADLAERAT-------TAVVDRAPSWG 293

Query: 290 KRLSDHCPISIDYDF 304
            R SDH P+ +DY F
Sbjct: 294 TRFSDHAPLVVDYQF 308


>gi|319406308|emb|CBI79945.1| exodeoxyribonuclease III [Bartonella sp. AR 15-3]
          Length = 272

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 84/307 (27%), Gaps = 68/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ +WNIN                      + + QY      D++ LQE+        +
Sbjct: 3   FRIATWNIN----------------SIRLRLSQVLQYLDIFSVDMLCLQEIKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +                S    +  +A+  +   V  +       +D        
Sbjct: 44  FPRQFFEAAGYQH------IALSGQKSYHGVAIISRLPFVSIERRFFCQKEDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +++E++G++I + + ++ +    D  +   +          + +   I   +   +
Sbjct: 93  --LSVIIELHGRRIRIHNFYVPAG--GDEPDVNKNEKFRYKLDFLEEMSS-IRSDQGDGL 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N       + ++    K +                   +     +       
Sbjct: 148 ASLLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETERLQALCCEGGWVDLMRMKFPIPTKL 207

Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     N   F                     + SDH P
Sbjct: 208 YTWWSYRARDWALADRGRRLDHIWSSPNLVPF-------VKELAIFREARGWPQASDHVP 260

Query: 298 ISIDYDF 304
           +   +DF
Sbjct: 261 VQTLFDF 267


>gi|296137256|ref|YP_003644498.1| Endonuclease/exonuclease/phosphatase [Thiomonas intermedia K12]
 gi|295797378|gb|ADG32168.1| Endonuclease/exonuclease/phosphatase [Thiomonas intermedia K12]
          Length = 278

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 87/290 (30%), Gaps = 48/290 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
           ++R+ S+NI+                   +    L+   + L  D+VFLQE+        
Sbjct: 2   ELRVASYNIH--------KGVLGHGPAKRASILELQTALQGLQPDLVFLQEVQFLHQRNA 53

Query: 81  AKV--FPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            ++  +P      F +    ++ + R +          A+  +   +      +     S
Sbjct: 54  RRLSGWPALPQHDFLAQALSMHAAYRTNACTRHGEHGNALLSRYPIIDIAHCDV-----S 108

Query: 137 FSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             R   R  + + V +  G  +  + +H   F              +   +Q   L D+I
Sbjct: 109 DHRFEQRGLLHVQVALPKGGPLHCIVVHFGLF-------------AASRQRQTDRLLDYI 155

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCNANKNLR 252
             +  +    ++AGDFN     +G      + +            K S   R        
Sbjct: 156 AARVPAQAALIVAGDFNDWHGRIGP-QLLQQGLVDVSEPPLKTNGKTSWRKRVRTYPARL 214

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +P+D       +   +                    RLSDH P+    
Sbjct: 215 PLMPLDRIYARAFSASEIGLGW-----------GRAWARLSDHAPLLASL 253


>gi|328702292|ref|XP_001952290.2| PREDICTED: recombination repair protein 1-like [Acyrthosiphon
           pisum]
          Length = 317

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++++SWN+  L                      + +Y K  D DI+ LQE+  +   +  
Sbjct: 64  LKIISWNVAGLRAWLKKD---------------VVEYLKKEDPDIICLQEIKCTEKQMPD 108

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 + I+ ++           +   ++ +A+  K   +  +    +   D       
Sbjct: 109 EAKLPGYKIYINS----------GDKAGYSGVALYSKTKPISVRMGKEIKDLDDNEGR-- 156

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++E   ++ +++  ++ +                   +  + L        ++ 
Sbjct: 157 ------VIEAEYEQFFLVSTYIPNAGAGLKTLPKRMKWDEAFRKYLKEL--------DTK 202

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P V+ GD N                         D    +     +  F      +  A
Sbjct: 203 KPVVLTGDLNVAHEEIDIANPKTNTKSAGFTKEERDNMSLLLEQGFVDTFRTLNPEKTGA 262

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DYF+  +     +   +    +             SDHCPI
Sbjct: 263 YTFWTYFHNSRAKNVGWRLDYFITSKRFMDNVCDSTIRNEVL-----------GSDHCPI 311

Query: 299 SIDYD 303
               +
Sbjct: 312 VFYIN 316


>gi|326384218|ref|ZP_08205900.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395]
 gi|326197083|gb|EGD54275.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395]
          Length = 294

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 79/306 (25%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                        L  +  +   D+V LQE        KV
Sbjct: 1   MRLATWNVN----------------SVKQRVPRLLPWLDDRQPDVVCLQE-------TKV 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--PLLGAKDSFSRAG 141
             +              +    +       +A+  +      +       G  D+     
Sbjct: 38  SDEAFAAELGDELAARGYEFAHAGQGQWNGVALLSRVGLDDVRVAFPDAPGFPDTTGEPE 97

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R    +        + V  +++ +   +DS    Y            WL+      +  
Sbjct: 98  GRAVSAVC-----DGVRVYSVYVPNGREVDSDHYNYK---------LNWLEKLRLAVEPD 143

Query: 202 LVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               VI GD+N                         + ++ +     L    ++      
Sbjct: 144 ADTTVICGDYNIIPTDADCFDPEAFVGHTHVTPAEREAFEALKALG-LHDVMRDHWPDKQ 202

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +         + ID+ +   +  +              D    +G + SDH P
Sbjct: 203 IYTYWDYRAGMFHKDLGMRIDFLLAGGSVAERAKASWV-------DRQARKGTKPSDHAP 255

Query: 298 ISIDYD 303
           + +D D
Sbjct: 256 VFLDLD 261


>gi|254428681|ref|ZP_05042388.1| exodeoxyribonuclease III [Alcanivorax sp. DG881]
 gi|196194850|gb|EDX89809.1| exodeoxyribonuclease III [Alcanivorax sp. DG881]
          Length = 271

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 81/314 (25%), Gaps = 78/314 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           + L+S+NIN                   +    L+         ++ LQE  +       
Sbjct: 1   MTLISFNING----------------IRARLHQLQTVIDKYQPALIGLQETKVHDPEFPE 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      +  +                  H  +A+  +      Q       +D+     
Sbjct: 45  QAVRDMGYHPY------------FFGQKGHYGVALITREPLESVQYGFPTDEEDA----- 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            RR +   ++ +   +  +     +  F       +        +  + L+ ++    + 
Sbjct: 88  QRRMIIGTLKHSDGSLITVL----NGYFPQGENREHPTKFPAKKKFYEDLQHYLINHHQP 143

Query: 202 LVPFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKE 240
                + GDFN                        ++L    ++W+ +        +  +
Sbjct: 144 SDQVAVMGDFNISSTDLDIGIGEANRKRWLREGKTSFLPEEREWWERLVGWGLTDTYRHQ 203

Query: 241 KDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
             S  +       +             ID  +  Q     L            D      
Sbjct: 204 NPSTDDVFSWFDYRSKGFDREPRRGLRIDTVLATQPLMAKLDTTGV-------DYDMRGM 256

Query: 290 KRLSDHCPISIDYD 303
           ++ SDHCP+   ++
Sbjct: 257 EKPSDHCPVWARFN 270


>gi|291486726|dbj|BAI87801.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. natto
           BEST195]
          Length = 252

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 85/304 (27%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L              R          Y K  DADI+ LQE    +    +
Sbjct: 1   MKLISWNVNGL--------------RAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  + ++++           +    ++  AV  K   +       L   D   R    
Sbjct: 47  QPE-GYHVYWN----------YAVKKGYSGTAVFSKQEPLQVIYGIGLEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  + ++V+ ++  +        +        L      L            
Sbjct: 92  -----VITLEFENVFVITVYTPNSRRGLERIDYRMQWEEALLSYILELDQ--------KK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + +        +  F         A 
Sbjct: 139 PVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAFTRFLEAGFVDSFRHVYPDLEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +   + +   S            S     SDHCP+ 
Sbjct: 199 SWWSYRAGARDRNIGWRIDYFVVSERLKEQIEDASI-----------SADVMGSDHCPVE 247

Query: 300 IDYD 303
           +  +
Sbjct: 248 LIIN 251


>gi|254469348|ref|ZP_05082753.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio
           sp. JE062]
 gi|211961183|gb|EEA96378.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio
           sp. JE062]
          Length = 362

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/372 (11%), Positives = 95/372 (25%), Gaps = 85/372 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSV------------ 47
           ++  +L      +   A+ AQ   V +VS+N+  L +                       
Sbjct: 1   MKSLLLGATILGLATPAAYAQDKPVTVVSYNVQNLFDTIDDENNPQDDTYLSKEEKEARG 60

Query: 48  ----------------------------KRTTSDYTLLRQYAKN--LDADIVFLQEMGSY 77
                                       +  +     L +  ++     DI+ L E  + 
Sbjct: 61  KEHEEACESYNEKGSHYYKQCIELNWGEESYSKKLMTLGEVIRSFPETPDILVLPETENK 120

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDS 136
             +  +  K    + Y +   ++ S  + N  I   I  R          +    G +++
Sbjct: 121 QVLDDLVNKALSGLDYKSVVQLDTSNNEHNRGIDVGIISRLPLKGEPETITVFGEGDENT 180

Query: 137 FSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 R  V+   E  +G+ ++V  +H  S             +        + L    
Sbjct: 181 HDCKPTRDIVKAEFEMPDGESMYVFGVHFPSG-----------AAYQCRKDAMEVLNKE- 228

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE---KDSRCNANKNLR 252
             K       V AGDFN         +  ++ +         P+               +
Sbjct: 229 RAKLPEDANVVAAGDFNFNCT--DVQNGEFQALAREGHWSYPPEIVGCAAPGSAFYYRDQ 286

Query: 253 NKIPIDYFVMDQNAYKFLIQES----------------------FSEILYNEDDIKSRGK 290
           +   +D  ++           S                          +  +       +
Sbjct: 287 SWSFLDMILVSSALRPDQDSNSTWFADLGSFHTVVTHPSQYAQDARNKVRPKRFDADNNQ 346

Query: 291 RLSDHCPISIDY 302
             SDH P+ + +
Sbjct: 347 GASDHWPVLMRF 358


>gi|148554832|ref|YP_001262414.1| endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1]
 gi|148500022|gb|ABQ68276.1| Endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1]
          Length = 230

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 77/281 (27%), Gaps = 53/281 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + S+NI            K            +      + ADIV LQE        + 
Sbjct: 2   ITVASYNIR-----------KGLGTDRRRRPDRILDVLHEIHADIVALQEADRRFGARQS 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +    +         AI VR        +   L            R
Sbjct: 51  ALPAELISQGEYKAVPFDIRPGGIGWHGNAILVRHSVEIGDYEPIRLPTL-------EPR 103

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV   + + G  + V+ +HL               S     +Q +       +++   +
Sbjct: 104 GAVMAELRVGGNDLRVVGMHLDL-------------SGLWRRRQVRA-IIDHIRRRRHRM 149

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+ GD N    + G   +F   +           +      +  + R    +D  ++ 
Sbjct: 150 PTVLMGDLNEWSLHGGCIREFAPEL-----------QIAPTGRSYHSRRPVGCLDRIILT 198

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +    L+                R +  SDH PI    ++
Sbjct: 199 PDL--HLVACGVHV--------SERARLASDHLPIWARVNW 229


>gi|56696006|ref|YP_166360.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria
           pomeroyi DSS-3]
 gi|56677743|gb|AAV94409.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria
           pomeroyi DSS-3]
          Length = 337

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 95/337 (28%), Gaps = 58/337 (17%)

Query: 24  VRLVSWNINTLSE----QEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQEMG 75
           +RL +WNI   +      + + +      R           + +    LDAD V + E  
Sbjct: 1   MRLATWNIEWFANLFDRNDRLLVDDRWSGRHDVTRAQQVEAIAKVLTALDADAVLIVEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           +                    R          N+ H  +A+     R+  +  PL     
Sbjct: 61  NTGRTQNTVRALGAFAEAFDLRTHAAVMGF-ANETHQELALLYDPARLEARHDPLGEETG 119

Query: 136 SFSRA-----------------------GNRRAVELLVE-INGKKIWVLDIHLKSFCFLD 171
               A                        ++  +EL V    G +  ++  HLKS     
Sbjct: 120 KRGSATPPRFDGTYRIDLDIDATEDLVRFSKPPLELEVTTATGTRFRMIGAHLKSKAPHG 179

Query: 172 SLENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
           +     +   S+L++     QA WL++ +          V+ GD N           F +
Sbjct: 180 AGSRDEAIRISILNRRKQLAQAIWLRERVEDHLTRGDEVVLLGDLNDGPGLDEFEHLFGR 239

Query: 227 ---TIDPNDSLIRFPKEKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLI 271
               I     L     +K  +                        +DY ++ +       
Sbjct: 240 SSVEILLEAGLYDPHADKARQVRPGPLPATARFQLPGEGRYLSALLDYVMISKGLMARRP 299

Query: 272 QESFSEILYNED-----DIKSRGKRLSDHCPISIDYD 303
                    + +     +++      SDH P+++D D
Sbjct: 300 AWRIWHPFDDAECWQMVELREALLTASDHFPVTLDID 336


>gi|319956480|ref|YP_004167743.1| endonuclease/exonuclease/phosphatase [Nitratifractor salsuginis DSM
           16511]
 gi|319418884|gb|ADV45994.1| Endonuclease/exonuclease/phosphatase [Nitratifractor salsuginis DSM
           16511]
          Length = 531

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/336 (12%), Positives = 87/336 (25%), Gaps = 78/336 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKN---------SVKRTTSDYTLLRQYAKNLDADIVFL 71
           ++ +++ SWN+  L +                  S            Q   +LDAD++ L
Sbjct: 19  SRTIKIASWNVENLFDMHYQGTEYEEYVPGRHGWSEAMLRKKLEHTAQVICDLDADVIGL 78

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ +   ++++                   +  +        A+  +      +  P+ 
Sbjct: 79  QEIENDEVLSRL------QRLLKRVGCPYPYRAVTGGRAPVHTALLSRIPLAKVRDLPVT 132

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                      R  +E  + ++            S     +   +     S     A+ L
Sbjct: 133 RYG------RQRPILEATLRLD-----------PSLKIFVNHWRSKRGPESERILYAKAL 175

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN----------------------------NDD 223
           +  + +   S   +++ GDFN                                      D
Sbjct: 176 RKRLMKLPPSTE-YLLLGDFNSDWEEFRIIDPKLNDTGGITGINQVMATTRDGRMVRYRD 234

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS------- 276
             +          +     S+  ++    NK  ID  ++  +       E          
Sbjct: 235 LKRGQREFLHYNLWLDLPASQRWSHNFYGNKEAIDAMLIPPSLADGRRWEYVRGSFGVYR 294

Query: 277 ----------EILYNEDDIKSRGKRLSDHCPISIDY 302
                      + +     K  GK  SDH PI   +
Sbjct: 295 PSYLFGIHGEILRWGYRHGKHTGKGFSDHLPIYARF 330


>gi|298488865|ref|ZP_07006890.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298156618|gb|EFH97713.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 363

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 97/325 (29%), Gaps = 68/325 (20%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+                  + + +  + +   + +  ++   DIV 
Sbjct: 52  GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLSYNLDEVARVIRDEQPDIVL 111

Query: 71  LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LQ +                   VA ++P +T   ++ +E + N     S      A   
Sbjct: 112 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGS-VGRKLATLS 170

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
           R       +   P+  A     +   + A+ +      +G K+ V++  L +        
Sbjct: 171 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 228

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228
                      +Q    +  + + +    P++I GDFN             + +      
Sbjct: 229 --------TAQKQIVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAADS 280

Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274
              +  +     P   +S    R     +  N   I       DY     +  +     S
Sbjct: 281 ELHELWEKYPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 336

Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299
                      +     +SDH P+ 
Sbjct: 337 ARV-------RRDDTLLISDHLPVI 354


>gi|16081140|ref|NP_391968.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312070|ref|ZP_03593917.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221316395|ref|ZP_03598200.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221321308|ref|ZP_03602602.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325591|ref|ZP_03606885.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|585113|sp|P37454|EXOA_BACSU RecName: Full=Exodeoxyribonuclease
 gi|467372|dbj|BAA05218.1| 3'-exo-deoxyribonuclease [Bacillus subtilis]
 gi|2636635|emb|CAB16125.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 252

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 87/304 (28%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L              R          Y K  DADI+ LQE    +    +
Sbjct: 1   MKLISWNVNGL--------------RAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P++ + ++++           +    ++  AV  K   +       +   D   R    
Sbjct: 47  QPED-YHVYWN----------YAVKKGYSGTAVFSKQEPLQVIYGIGVEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  + ++V+ ++  +        +        L      L            
Sbjct: 92  -----VITLEFENVFVMTVYTPNSRRGLERIDYRMQWEEALLSYILELDQ--------KK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + +        +  F         A 
Sbjct: 139 PVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAFTRFLEAGFVDSFRHVYPDLEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + +   S            S     SDHCP+ 
Sbjct: 199 SWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASI-----------SADVMGSDHCPVE 247

Query: 300 IDYD 303
           +  +
Sbjct: 248 LIIN 251


>gi|16126254|ref|NP_420818.1| exodeoxyribonuclease III [Caulobacter crescentus CB15]
 gi|221235027|ref|YP_002517463.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000]
 gi|13423482|gb|AAK23986.1| exodeoxyribonuclease III [Caulobacter crescentus CB15]
 gi|220964199|gb|ACL95555.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000]
          Length = 262

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 85/299 (28%), Gaps = 65/299 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N+++                +    +  + ++   D+  LQE+   +     
Sbjct: 1   MRIATWNVNSIN----------------ARLEGVLAWFESEAPDVAVLQEIKCVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++        +  +A+  K+     +      ++D        
Sbjct: 41  ------KFPTEAFERLGYNVAVHGQKTYNGVALLSKHPIEDVRKGLPFLSEDEVD--EQA 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +E ++        V+ I+L +   + + +  Y  S        + L            
Sbjct: 93  RYIEAVIAAP-TPFRVVGIYLPNGNPIGTEKFAYKLS------WMRRLHAHAQGLLAFEE 145

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P VIAGD+N                   +   +   ++ +        + +   +     
Sbjct: 146 PLVIAGDYNVIPEVEDVANPQAWLGDALFQPESRAAFRALKNLGFADAYMQADGAPGGYT 205

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                           ID+ ++   A   L               +   ++ SDH P+ 
Sbjct: 206 FWDYQAGAWQRNLGIRIDHLLLSPQAADRLTG-------LVIHRDERDKEKPSDHVPVV 257


>gi|110834346|ref|YP_693205.1| exodeoxyribonuclease III [Alcanivorax borkumensis SK2]
 gi|110647457|emb|CAL16933.1| exodeoxyribonuclease III [Alcanivorax borkumensis SK2]
          Length = 271

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 81/314 (25%), Gaps = 78/314 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           + L+S+NIN                   +    L+         ++ LQE  +   +   
Sbjct: 1   MTLISFNING----------------IRARLHQLQAVIDKYQPALIGLQETKVHDPDFPE 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      +  +                  H  +A+  +      Q       +D+     
Sbjct: 45  QAVRDMGYHPY------------YFGQKGHYGVALITREPLESVQYGFPTDDEDA----- 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            RR +   ++ N   +  +     +  F       +        +  + L+ ++    + 
Sbjct: 88  QRRMIIGTLKHNDGSLITVL----NGYFPQGENRDHPLKFPAKKKFYEDLQHYLITHHQP 143

Query: 202 LVPFVIAGDFNRK---------------------INYLGNNDDFWKTIDPNDSLIRFPKE 240
                + GDFN                        ++L    ++W  +        F  +
Sbjct: 144 SDQVAVMGDFNISSTDLDIGIGEPNRKRWLREGKTSFLPEEREWWDRLVGWGLTDTFRHQ 203

Query: 241 KDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
             +  +       +             ID  +  +     L            D      
Sbjct: 204 NPTTDDVFSWFDYRSKGFDREPRRGLRIDTVLATEPLMAKLDTTGV-------DYQMRAM 256

Query: 290 KRLSDHCPISIDYD 303
           ++ SDHCP+   ++
Sbjct: 257 EKPSDHCPVWARFN 270


>gi|23502852|ref|NP_698979.1| exodeoxyribonuclease III [Brucella suis 1330]
 gi|254700641|ref|ZP_05162469.1| exodeoxyribonuclease III [Brucella suis bv. 5 str. 513]
 gi|254708986|ref|ZP_05170797.1| exodeoxyribonuclease III [Brucella pinnipedialis B2/94]
 gi|254713585|ref|ZP_05175396.1| exodeoxyribonuclease III [Brucella ceti M644/93/1]
 gi|254716061|ref|ZP_05177872.1| exodeoxyribonuclease III [Brucella ceti M13/05/1]
 gi|256030513|ref|ZP_05444127.1| exodeoxyribonuclease III [Brucella pinnipedialis M292/94/1]
 gi|256059974|ref|ZP_05450158.1| exodeoxyribonuclease III [Brucella neotomae 5K33]
 gi|260169418|ref|ZP_05756229.1| exodeoxyribonuclease III [Brucella sp. F5/99]
 gi|261217826|ref|ZP_05932107.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1]
 gi|261316482|ref|ZP_05955679.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94]
 gi|261321326|ref|ZP_05960523.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1]
 gi|261323946|ref|ZP_05963143.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33]
 gi|261751147|ref|ZP_05994856.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513]
 gi|261758940|ref|ZP_06002649.1| exodeoxyribonuclease III [Brucella sp. F5/99]
 gi|265987555|ref|ZP_06100112.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1]
 gi|23348878|gb|AAN30894.1| exodeoxyribonuclease III [Brucella suis 1330]
 gi|260922915|gb|EEX89483.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1]
 gi|261294016|gb|EEX97512.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1]
 gi|261295705|gb|EEX99201.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94]
 gi|261299926|gb|EEY03423.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33]
 gi|261738924|gb|EEY26920.1| exodeoxyribonuclease III [Brucella sp. F5/99]
 gi|261740900|gb|EEY28826.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513]
 gi|264659752|gb|EEZ30013.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1]
          Length = 268

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       L+ Q+ ++   D++ LQE         +
Sbjct: 3   FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                S    +  +A   +      +        D        
Sbjct: 44  FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+   
Sbjct: 93  --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N     N + ++    K +                            +    
Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    +                    R SDH P
Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDHVP 260

Query: 298 ISIDYD 303
           +   +D
Sbjct: 261 VIATFD 266


>gi|332868399|ref|ZP_08438130.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013113]
 gi|332733398|gb|EGJ64581.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013113]
          Length = 812

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 99/325 (30%), Gaps = 50/325 (15%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K++DAD+  L E+ + 
Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIANN 520

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +         + +      R  N+ I  AI    K V+ L ++  L     
Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKPLNKAVVLDLGD- 579

Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL-------DSLENTYSP-SCSLLS 185
                 NR  +    +     K   V+  HLKS           D+ +N           
Sbjct: 580 -----KNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWNPTRV 634

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  W+ +          ++ GD N            ++  +    L      + +
Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 692

Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
           +  +                 +D+ + D + Y  +++     I  +E  +          
Sbjct: 693 QAYSYVFGVASDANGNGGVGNLDHAIADADLYPKVVRTFAWHINADEPMVLDYNEEYKTD 752

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +D D
Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777


>gi|313816882|gb|EFS54596.1| exodeoxyribonuclease III [Propionibacterium acnes HL059PA1]
 gi|315100096|gb|EFT72072.1| exodeoxyribonuclease III [Propionibacterium acnes HL059PA2]
          Length = 317

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 83/320 (25%), Gaps = 64/320 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+NIN +      +L +   +R  +            D D++ LQE+    A   +
Sbjct: 21  MRIASFNINGIRA----ALKRGFSERMEAR-----------DCDVIGLQEVRCRPA--DL 63

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGAKDSFSRA 140
                     S        +        TA A       ++ +     P      + +  
Sbjct: 64  PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTD 123

Query: 141 GNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           G    +         + V++    + V  ++L      D                    +
Sbjct: 124 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFR 183

Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232
           D +     +       F++ GDFN                           F   + P+ 
Sbjct: 184 DHLVRRRQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDT 243

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +     +             +           IDY +         I           D
Sbjct: 244 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITAEI-------D 296

Query: 284 DIKSRGKRLSDHCPISIDYD 303
              S  +R SDH  + +DYD
Sbjct: 297 RDPSYSERTSDHAAVVVDYD 316


>gi|160884067|ref|ZP_02065070.1| hypothetical protein BACOVA_02043 [Bacteroides ovatus ATCC 8483]
 gi|299144720|ref|ZP_07037788.1| putative secreted protein [Bacteroides sp. 3_1_23]
 gi|156110409|gb|EDO12154.1| hypothetical protein BACOVA_02043 [Bacteroides ovatus ATCC 8483]
 gi|298515211|gb|EFI39092.1| putative secreted protein [Bacteroides sp. 3_1_23]
          Length = 260

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 80/288 (27%), Gaps = 67/288 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++++N+                    +    L  + K+   D V LQE+ S     + 
Sbjct: 24  VRVMTYNLRFG---------------ELASLEELAHHIKSFKPDFVALQEVDSKTDRKRT 68

Query: 84  FPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +          Y T     + K    +  +  I +  K   +  Q   L        R
Sbjct: 69  PHQKGKDFISELAYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHER 128

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  +E L E+    I     HL               S    ++Q +++        
Sbjct: 129 ---RAMLEGLFEMGNDTIVFTSTHL------------DVNSQETRAEQIKFITGHFKNY- 172

Query: 200 ESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               P ++ GDFN +            F  + D                      +  I 
Sbjct: 173 --KYPVILGGDFNARHYSEAIRGMDSWFAASNDD---------------FGMPAWKPVIK 215

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           IDY          +I     + L            LSDH PI  + ++
Sbjct: 216 IDYLFAYPQKGWRVISTQTVQSL------------LSDHLPIITELEY 251


>gi|148360915|ref|YP_001252122.1| endonuclease/exonuclease/phosphatase family transporter protein
           [Legionella pneumophila str. Corby]
 gi|296106019|ref|YP_003617719.1| endonuclease/exonuclease/phosphatase family protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148282688|gb|ABQ56776.1| endonuclease/exonuclease/phosphatase family protein [Legionella
           pneumophila str. Corby]
 gi|295647920|gb|ADG23767.1| endonuclease/exonuclease/phosphatase family protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 251

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 88/287 (30%), Gaps = 50/287 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
            V L+++NI+       V                +R     L+ D VFLQE+        
Sbjct: 7   SVSLITYNIHKGFGVGAVRFL----------LPEMRDAIAGLNPDFVFLQEVQGKHRKRE 56

Query: 81  AKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            ++           I  +      ++K       H   A+  K      +S  L      
Sbjct: 57  KRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESINLSN---- 112

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                +R  +   ++++   I +L +HL  F              +  ++Q + L   I 
Sbjct: 113 -MNRASRGILHTQLKLDNNIIHLLCVHLGLFK-------------AERTEQCKALIQRIK 158

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P ++AGDFN   +    +    + +   ++ +    +      +   ++  + 
Sbjct: 159 DVVPKNEPLIMAGDFNDWRHV--ISKILAENLGIEEAFVALEGQH---ARSFPAIKPALC 213

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D         + +                   + LSDH P+   ++
Sbjct: 214 VDRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 249


>gi|328709897|ref|XP_003244099.1| PREDICTED: nocturnin-like isoform 2 [Acyrthosiphon pisum]
 gi|328709899|ref|XP_001951703.2| PREDICTED: nocturnin-like isoform 1 [Acyrthosiphon pisum]
          Length = 417

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 100/295 (33%), Gaps = 29/295 (9%)

Query: 21  AQKVRLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              VR++ WN+    L    +                  + +     + DI+ LQE+  +
Sbjct: 128 GNPVRVLQWNVLSQALGQNNDRFDSCPLEALEWKHRRCHMLEEILKHNPDIICLQEVDHF 187

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           + +++     ++   +  +         D+N     AI  +     +L++   +L     
Sbjct: 188 DFLSRALATQSYSGLFVPKPDSPCVYINDNNGPDGCAIFYKNDKFDLLEKHDKVLQVWTV 247

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            S   +   + L  +   K++ V   HLK+           +   +L ++Q + L  +I+
Sbjct: 248 HSNQVS-LLLVLKDKSTQKELCVSTTHLKA--------RKGALLSTLRNEQGKDLLQFIS 298

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKI 255
                  P ++ GDFN +          + T+     L      K S       + + + 
Sbjct: 299 SHAA-DRPTIVCGDFNAEPTEP-----VYSTMCSCSYLPLDSAYKLSGSEPLYTSWKIRG 352

Query: 256 -------PIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   IDY    ++      I +   EI   E+ + S     SDH  +  D+
Sbjct: 353 GEGEVMHTIDYMFYTKHKLTVSNILDMPKEIDIGENRVPSMTY-PSDHFSLISDF 406


>gi|313156920|gb|EFR56358.1| putative lipoprotein [Alistipes sp. HGB5]
          Length = 673

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 97/341 (28%), Gaps = 68/341 (19%)

Query: 1   MIRKYVLALVFFLVPCTASVA-------------------------QKVRLVSWNINTLS 35
           M +  +LA+   L   TA  A                         Q + L S+N+   S
Sbjct: 1   MKKTIILAMFAALCTLTAGCADDFKTVLNDKYYEDDTPSREPDITEQTLTLGSYNLWISS 60

Query: 36  EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95
           +  G  LW N         T+L Q       DI   QE  +     ++            
Sbjct: 61  KGTGDYLWTN-------RRTVLAQSIVKNKWDIFGFQEA-NGTIQNELPTLVGQQGGKYE 112

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN------RRAVELL 149
              +    +D  +     IA       +  + +  +         G       R A   +
Sbjct: 113 WWFVGRDSQDGVSGEALGIAYNPDRFELTDKHFFWISPTPDEMSYGWDELGYHRIAACAM 172

Query: 150 VEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           V      K+ +++  H                  +  ++ A+ L +         +P ++
Sbjct: 173 VTDKLYNKQFFMMVTHAPLG-------------ATARAEGAKLLIEREKMYNPDGIPSIL 219

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSL-IRFPKEKDSRCNANKNL----RNKIPIDYFVM 262
            GD N  ++   +        D   ++   F        N +K      +    IDY   
Sbjct: 220 VGDMNAAMDDASSKTLRTHWNDSFLTVESDFVSGPVGTFNGHKITADLTQATARIDYIYS 279

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +              Y  D+        SDHCP++I +D
Sbjct: 280 RGD---------VELKSYKVDNTVYGNIYPSDHCPLTIQFD 311


>gi|331243524|ref|XP_003334405.1| CCR4-NOT transcription complex [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309313395|gb|EFP89986.1| CCR4-NOT transcription complex [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 786

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/314 (10%), Positives = 80/314 (25%), Gaps = 38/314 (12%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           +   +    + +NI     +         +          L+ Q      ADI+ LQE+ 
Sbjct: 475 SPPPETFTTMCYNILCERYATDRMYGYTPSWALNWEYRKDLILQELMQYGADIICLQEVD 534

Query: 76  SYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                    +      +   +  +      +     D+   +  +     +    +   G
Sbjct: 535 VEQYEDFFVQSLKDQGYEGVFYPKSRARTMESHKTEDMFNRVMTKDNIAVIALLEHRQSG 594

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            +   +       V +  +   + + ++   +       S  ++        +  +   +
Sbjct: 595 TRQIVAN------VHIHWDPEFRDVKLIQTAMLMDQ--ISEISSRFARLPKRTNLSNNYR 646

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------- 245
              +    + +P +I GDFN      G  D   + + P+                     
Sbjct: 647 TAPSYSDGTQIPTIICGDFNSIPQS-GVYDYLSQGLIPSTHPDFCKNNYGPYTQFGIHHS 705

Query: 246 ----------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSR 288
                             N     K  IDY     ++     +     +    +      
Sbjct: 706 LKLKSAYSNLDSKELPFTNYTPGFKGVIDYIWYSTESLQVIGLLGKIDDAYLKKVVGFPN 765

Query: 289 GKRLSDHCPISIDY 302
               SDH P+  ++
Sbjct: 766 AHFASDHVPVLAEF 779


>gi|262067405|ref|ZP_06027017.1| exodeoxyribonuclease III [Fusobacterium periodonticum ATCC 33693]
 gi|291378968|gb|EFE86486.1| exodeoxyribonuclease III [Fusobacterium periodonticum ATCC 33693]
          Length = 253

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                 +       Y    +ADI  LQE    +A    
Sbjct: 1   MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELKGYHQYWNYAEKKGY----------SGTAIFTKEEPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                         + ++   ++   
Sbjct: 91  -----VITLEFEKFYMITVYTPN-------SKDELQRLDYRMVWEDEFRKYLKNLEKKK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +  +     F        +A 
Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLESGFTDTFRYFYPDLEHAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ +   K+L+                     SDHCP+ 
Sbjct: 198 SWWSYRANARKNNTGWRIDYFIVSKALDKYLVDAEIHAQT-----------EGSDHCPVV 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 LFLDF 251


>gi|329940786|ref|ZP_08290066.1| large secreted protein [Streptomyces griseoaurantiacus M045]
 gi|329300080|gb|EGG43978.1| large secreted protein [Streptomyces griseoaurantiacus M045]
          Length = 608

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 84/323 (26%), Gaps = 66/323 (20%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            ++++ + ++N+  L   +G                 +  + K+   DIV L+E+   N 
Sbjct: 300 SSRELAVATYNVENLDPSDGTFAD---------HADAIVHHLKS--PDIVSLEEIQDNNG 348

Query: 80  VAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                               V        +   + +      +   +I  A       V 
Sbjct: 349 ATDDGTVAADRTLGKLIDAVVAAGGPRYEWRGIDPVDGQDGGEPGGNIRQAFLFNPARVS 408

Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
              +                       P        +   +R+ +       GK ++V+ 
Sbjct: 409 FTDRPGGTSTTAVGVEKVKGAARLTASPGRIDPADAAWRNSRKPLAGEFVFRGKTVFVIA 468

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI 215
            H  S      L   Y P    S +    QA  +  ++      +     +  GD N   
Sbjct: 469 NHFASKGGDQGLTAQYQPPVRSSETQRHAQATEVNAFVKDILEAQRNARVIALGDLNDF- 527

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKE-KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                     + ++   +L    K    S         N   +D  ++  +         
Sbjct: 528 ----EFSGTARLLEDGGALWSAIKSLPKSERYTYDYQGNSQVLDQILISPSLR-----RP 578

Query: 275 FSEILYNEDDIKSRGKRLSDHCP 297
            +    +         ++SDH P
Sbjct: 579 GAYAYDSVHLNAEFPTQISDHDP 601


>gi|306812808|ref|ZP_07447001.1| hypothetical protein ECNC101_12867 [Escherichia coli NC101]
 gi|305853571|gb|EFM54010.1| hypothetical protein ECNC101_12867 [Escherichia coli NC101]
          Length = 253

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAVLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|169796594|ref|YP_001714387.1| putative extracellular nuclease [Acinetobacter baumannii AYE]
 gi|215484055|ref|YP_002326280.1| nuclease [Acinetobacter baumannii AB307-0294]
 gi|301510758|ref|ZP_07235995.1| nuclease [Acinetobacter baumannii AB058]
 gi|301595167|ref|ZP_07240175.1| nuclease [Acinetobacter baumannii AB059]
 gi|332853534|ref|ZP_08434798.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013150]
 gi|169149521|emb|CAM87410.1| putative extracellular nuclease [Acinetobacter baumannii AYE]
 gi|213986940|gb|ACJ57239.1| nuclease [Acinetobacter baumannii AB307-0294]
 gi|332728567|gb|EGJ59939.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013150]
          Length = 812

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 99/325 (30%), Gaps = 50/325 (15%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K++DAD+  L E+ + 
Sbjct: 461 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIANN 520

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +         + +      R  N+ I  AI    K V+ L ++  L     
Sbjct: 521 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKPLNKAVVLDLGD- 579

Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL-------DSLENTYSP-SCSLLS 185
                 NR  +    +     K   V+  HLKS           D+ +N           
Sbjct: 580 -----KNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWNPTRV 634

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  W+ +          ++ GD N            ++  +    L      + +
Sbjct: 635 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 692

Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
           +  +                 +D+ + D + Y  +++     I  +E  +          
Sbjct: 693 QAYSYVFGVASDANGNGGVGNLDHAIADADLYPKVVRTFAWHINADEPMVLDYNEEYKTD 752

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +D D
Sbjct: 753 EQKALFYGEDAYRSSDHDPVIVDLD 777


>gi|241204226|ref|YP_002975322.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858116|gb|ACS55783.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 264

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 74/303 (24%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ K    D+V LQE+ + +A    
Sbjct: 1   MKIATYNVNGING----------------RLDILLRWLKEDVPDVVCLQELKTDDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  K    +     L G  D      +R
Sbjct: 41  ------GFPRKEIERAGYGAIWHGQRSWNGVAILAKGKTPILTRRGLPGDPDDTH---SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       +           F  +           L   A  L +         V
Sbjct: 92  YIEAAV----DGILVGCLYLPNGNPFPGAKFEYKLRWFRRLQDYAAELLEL-------GV 140

Query: 204 PFVIAGDFNRKINY---LGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P ++AGDFN                  +   +                 +          
Sbjct: 141 PSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKAYAHLVAQGWTDAVRHLHPEERIYT 200

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             R             ID+F++       L   +               +  SDH P+ I
Sbjct: 201 FWRYWRNSFERDAGLRIDHFLLSPAVAPLLRWATVR-------KKPRGWEHTSDHAPVMI 253

Query: 301 DYD 303
           + D
Sbjct: 254 ELD 256


>gi|83309117|ref|YP_419381.1| exonuclease III [Magnetospirillum magneticum AMB-1]
 gi|82943958|dbj|BAE48822.1| Exonuclease III [Magnetospirillum magneticum AMB-1]
          Length = 263

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 77/306 (25%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RLV+WNIN                       LLRQ A  ++ DI+ LQE+   + +  +
Sbjct: 1   MRLVTWNIN----------------SIRLRIDLLRQVASVMNPDIICLQEIKVDDPLFPL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +                 +  +A+  +      +     G  D       R
Sbjct: 45  DACREMGFGHVA---------FHGMKGYNGVAILSRLPIAEARPLSRCGRDD-------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E       V    L      D  +   +   +      + +  W   +     
Sbjct: 89  RHLMARLENG-----VEVHCLYIPAGGDIPDPETNDKFAHKLDFVREITAWAAAEFTPDS 143

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++AGDFN                   +     +           +             
Sbjct: 144 RAILAGDFNIAPLEADVWSHKQLLKVVSHTPVEVELLNAFQASVPFVDAMRHFVPPEEKL 203

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +       L                   ++ SDH P
Sbjct: 204 FTWWSYRSPDWQKNDRGRRLDHVWVTPALVPSLRG-------MLVAREARSWEQPSDHVP 256

Query: 298 ISIDYD 303
           + +D+D
Sbjct: 257 VMVDFD 262


>gi|68476691|ref|XP_717638.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p
           [Candida albicans SC5314]
 gi|68476838|ref|XP_717564.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p
           [Candida albicans SC5314]
 gi|74586169|sp|Q5A761|CCR4_CANAL RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|46439279|gb|EAK98599.1| potential mRNA deadenylase and  CCR4-NOT complex  subunit Ccr4p
           [Candida albicans SC5314]
 gi|46439356|gb|EAK98675.1| potential mRNA deadenylase and  CCR4-NOT complex  subunit Ccr4p
           [Candida albicans SC5314]
          Length = 787

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 88/327 (26%), Gaps = 42/327 (12%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +    ++S+N      +  +      +   +      LL +   N + DIV +QE+ 
Sbjct: 450 PESSDNFTVLSYNTLCQHYATPKMYKFTPSWALQWDYRKNLLEKEVLNYNTDIVCMQEVE 509

Query: 76  SYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--- 128
           +        P  T       F+S  R    S+ DS      A   +     ++ +     
Sbjct: 510 TKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKKVDGCATFFKNDKFSLIHKQNFEY 569

Query: 129 --------PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLEN 175
                        KD F+R  N+        L  + +G+KI V++ HL     F D    
Sbjct: 570 NSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKESGEKIAVVNTHLHWDPAFNDVKAL 629

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDFWKTID 229
                   L    +  +   + +       V+ GDFN   +               + ++
Sbjct: 630 QVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFNSVKDSAVYQLFSTGASKGHEDMN 689

Query: 230 PNDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESF 275
             D                            N        IDY            +    
Sbjct: 690 GRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAFTDNIDYIWYSTPTLQVKGLLGRV 749

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            E   +           SDH PI   +
Sbjct: 750 DEEYTSHSIGFPDANFPSDHVPILAKF 776


>gi|298386678|ref|ZP_06996233.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
 gi|298260352|gb|EFI03221.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
          Length = 343

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/343 (11%), Positives = 92/343 (26%), Gaps = 58/343 (16%)

Query: 2   IRKYV----LALVFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKN----------- 45
           ++K++    L L   +   +      +  +  +N+  L +    +   +           
Sbjct: 1   MKKFLTVWGLLLFISITSYSQEKKYALYSVAFYNLENLFDTIHDAGKNDFEYLPNGKNKW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           +  +  +    + +    L  D       I+ + E+ +   +  +  +            
Sbjct: 61  NSMKYEAKLKNMSEILSQLSTDKLPLGPTIIGMSEVENRRVLEDLLKQP---ALSDRGYE 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
           I H +      +  A     K   +          +++ +    R  +     + G+K+ 
Sbjct: 118 IVHYEGPDRRGVDCAFFYNPKFFHLTASKLAPYIYENNDTTYKTRGFLIASGTLAGEKVH 177

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  H  S           SP+     +Q + LKD +   ++S    +I GD N      
Sbjct: 178 FIVNHWPSR-------AAASPARERAGEQVRALKDSL-LNEDSNAKVIIMGDMNDDPMDK 229

Query: 219 GNNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271
                       +    +D    +                    D  V   N        
Sbjct: 230 SMAVALGAKRKTQDTKEHDLYNPWWDTLKKGNGTLMYDGKWNLFDQIVFTGNLLGNDRST 289

Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297
            + +   ++  D +  +  +                  SDH P
Sbjct: 290 LKYYRNEIFRRDYMFQKEGKYKGYPKRTHAGGVWLNGYSDHLP 332


>gi|296330017|ref|ZP_06872501.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676741|ref|YP_003868413.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296153056|gb|EFG93921.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414985|gb|ADM40104.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 252

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 84/307 (27%), Gaps = 83/307 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L              R          Y K  DADI+ LQE    +    +
Sbjct: 1   MKLISWNVNGL--------------RAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P + + ++++      +S     +                                  R
Sbjct: 47  QP-DGYHVYWNYAVKKGYSGTAVFSKQ-----------------------------EPLR 76

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL---LSQQAQWLKDWITQKKE 200
               + +E + ++  V+ +  ++   +                  Q  + L  +I +  +
Sbjct: 77  VMYGIGIEEHDQEGRVITLEFENLFVMTVYTPNSKRGLERIDYRMQWEEALLSYILE-LD 135

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              P ++ GD N                           +  +     +  F        
Sbjct: 136 KKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQERGAFTRLLEAGFVDSFRHVYPDLE 195

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            A      +           +DYFV+ +   + +   S            S     SDHC
Sbjct: 196 GAYSWWSYRAGARDRNIGWRLDYFVVSERLEEQIEDASI-----------SADVMGSDHC 244

Query: 297 PISIDYD 303
           P+ +  +
Sbjct: 245 PVELMIN 251


>gi|168752009|ref|ZP_02777031.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|168756575|ref|ZP_02781582.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4401]
 gi|168767291|ref|ZP_02792298.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|168777230|ref|ZP_02802237.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|168779334|ref|ZP_02804341.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|195936830|ref|ZP_03082212.1| DNase [Escherichia coli O157:H7 str. EC4024]
 gi|208815890|ref|ZP_03257069.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208822066|ref|ZP_03262385.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209396778|ref|YP_002269459.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|254791984|ref|YP_003076821.1| putative DNase [Escherichia coli O157:H7 str. TW14359]
 gi|187767486|gb|EDU31330.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|188014050|gb|EDU52172.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|189003112|gb|EDU72098.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|189356304|gb|EDU74723.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4401]
 gi|189363397|gb|EDU81816.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|208732538|gb|EDZ81226.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208737551|gb|EDZ85234.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209158178|gb|ACI35611.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|209775986|gb|ACI86305.1| hypothetical protein ECs0868 [Escherichia coli]
 gi|254591384|gb|ACT70745.1| predicted DNase [Escherichia coli O157:H7 str. TW14359]
          Length = 253

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNTSAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|167752898|ref|ZP_02425025.1| hypothetical protein ALIPUT_01160 [Alistipes putredinis DSM 17216]
 gi|167659967|gb|EDS04097.1| hypothetical protein ALIPUT_01160 [Alistipes putredinis DSM 17216]
          Length = 385

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 85/296 (28%), Gaps = 43/296 (14%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T+     + L+++N+ +               R    +  + +  + ++ DIV LQE   
Sbjct: 118 TSFGRGAITLLTFNVRSF-----------YNDRGQWSFDGVTEVIRRVNPDIVCLQEFNR 166

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-------QQSYP 129
            ++ A+           +     N         ++T   +  K+  +L       Q  + 
Sbjct: 167 TSSKAEELDSLLSDYDRTVVMEGNRRDPVFPLALYTKYRILGKSHSILGPMKQDGQSVWV 226

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKI---WVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            L   D   R  N       + ++  K                + ++   +  +  L + 
Sbjct: 227 DLLVGDDTIRIFNNHLHSTAITVHDDKYLSEHQFLTDTAGGAKIKNIFRRFRDNSMLRAA 286

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           QA  +   I          ++ GDFN             + +D       F         
Sbjct: 287 QADTIARAIAATPGCK---IVCGDFNDTPMSYT-YRVMAQDLDD-----AFRASGKGYSY 337

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +   + + IDY +  ++                 D        LSDH P+ +  
Sbjct: 338 TFRGFMDVLRIDYVLYSEDLECL-------------DYQVLYDVDLSDHYPVVVRL 380


>gi|323703101|ref|ZP_08114756.1| exodeoxyribonuclease III [Desulfotomaculum nigrificans DSM 574]
 gi|323531995|gb|EGB21879.1| exodeoxyribonuclease III [Desulfotomaculum nigrificans DSM 574]
          Length = 262

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 81/303 (26%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++ S+NIN                   +   +L  +      D++ LQE        KV
Sbjct: 3   FKVASFNIN----------------SIRARQEMLANWLTENKPDVICLQE-------TKV 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K+    ++       ++        +  +A+   +              D       R
Sbjct: 40  MDKDFPVEYFQEI---GYNSLFKGQKSYNGVAILSPHPMT----PIAGDLGDVAEPGEAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++     K I V++ ++      DS +  Y  +        + L+D+  +   +  
Sbjct: 93  LIAAMV-----KDIPVVNTYVPQGQAPDSEKFAYKLA------WLKALRDYFARNFSAHQ 141

Query: 204 PFVIAGDFNRKINYLGNNDDF------------WKTID--PNDSLIRFPKEKDSRCNANK 249
           P +  GDFN     +  +D               K ++           ++         
Sbjct: 142 PLLWMGDFNVAPEPIDVHDPKRLLGHVGFHPEEHKVLNYVKEWGFQDVFRKHQPEGGHFT 201

Query: 250 NLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               +            ID+        +              D    R  + SDH  I 
Sbjct: 202 FWDYRIRQGLARNLGWRIDHIWATAPLAEKSTNAWI-------DIEPRRLAKPSDHTFIL 254

Query: 300 IDY 302
            ++
Sbjct: 255 AEF 257


>gi|315174931|gb|EFU18948.1| exodeoxyribonuclease III [Enterococcus faecalis TX1346]
          Length = 251

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKCISWNVNGLRAVVKKNFM---------------DVFNELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A++VR                         R
Sbjct: 45  LELPGYHQYWNYAEKKGYSGTAIVAKEE-ALSVRYGLGI-------------EAHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +               +         + ++ +  +   
Sbjct: 91  -----VITLEYPEFFMVTCYTPN-------SQAELKRLAYRMTWEDAFRAYLNELNQEK- 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +     F           
Sbjct: 138 PVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 VVLDF 251


>gi|161524628|ref|YP_001579640.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC
           17616]
 gi|189350616|ref|YP_001946244.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616]
 gi|160342057|gb|ABX15143.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC
           17616]
 gi|189334638|dbj|BAG43708.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616]
          Length = 285

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 50/306 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +R++ WNI    + +G    + +          +    +  D D++ +QE+         
Sbjct: 1   MRMIDWNIQWGRDADGAVDLRRT----------IAAARQLADFDVLCVQEITRGFDALPG 50

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +  A++                  S +          A+  +          L   
Sbjct: 51  HPGVDQFAELAALLPGYTVVEAIGADLPSAQPGAPRRQFGNAIATRLPVGRVLRQLLPWP 110

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            D+ + +  R A+++ +      + V+  HL+ +   +        +     ++A    D
Sbjct: 111 ADADAPSMPRVALDVELLTASGPLRVVTTHLEFYS--ERQRLAQVDAIRARHREACAHAD 168

Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                +    PF         ++ GDFN   +                 +  +  +   R
Sbjct: 169 RPAPAENDTGPFVATAQSRDAILCGDFNSAFDSAAYRRMLEPIDGAPAFVDAWIAQHPGR 228

Query: 245 C--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                    +  +     +  D+  +       L +                  R SDH 
Sbjct: 229 TAPPTAGVYDTAQWSDGPLACDFAFVTDTLLPRLARCEI-----------DGAVRASDHQ 277

Query: 297 PISIDY 302
           PI ++ 
Sbjct: 278 PIVLEL 283


>gi|29348968|ref|NP_812471.1| hypothetical protein BT_3559 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253571112|ref|ZP_04848519.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 1_1_6]
 gi|29340875|gb|AAO78665.1| endonuclease/exonuclease/phosphatase family [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251839065|gb|EES67149.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 1_1_6]
          Length = 343

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/343 (11%), Positives = 92/343 (26%), Gaps = 58/343 (16%)

Query: 2   IRKYV----LALVFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKN----------- 45
           ++K++    L L   +   +      +  +  +N+  L +    +   +           
Sbjct: 1   MKKFLTVWGLLLFISITSYSQEKKYALYSVAFYNLENLFDTIHDAGKNDFEYLPNGKNKW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           +  +  +    + +    L  D       I+ + E+ +   +  +  +            
Sbjct: 61  NSMKYEAKLKNMSEILSQLSTDKLPLGPTIIGMSEVENRRVLEDLLKQP---ALSDRGYE 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
           I H +      +  A     K   +          +++ +    R  +     + G+K+ 
Sbjct: 118 IVHYEGPDRRGVDCAFFYNPKFFHLTASKLAPYIYENNDTTYKTRGFLIASGTLAGEKVH 177

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  H  S           SP+     +Q + LKD +   ++S    +I GD N      
Sbjct: 178 FIVNHWPSR-------AAASPARERAGEQVRALKDSL-LNEDSNAKVIIMGDMNDDPMDK 229

Query: 219 GNNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271
                       +    +D    +                    D  V   N        
Sbjct: 230 SMAVALGAKRKAQDTKEHDLYNPWWDTLKKGNGTLMYDGKWNLFDQIVFTGNLLGNDRST 289

Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297
            + +   ++  D +  +  +                  SDH P
Sbjct: 290 LKYYRNEIFRRDYMFQKEGKYKGYPKRTHAGGVWLNGYSDHLP 332


>gi|333029549|ref|ZP_08457610.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
 gi|332740146|gb|EGJ70628.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
          Length = 344

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/344 (13%), Positives = 90/344 (26%), Gaps = 57/344 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKN----------- 45
           M  KY+L  +      T   AQ       +  +N+  L + E                  
Sbjct: 1   MKFKYLLLTLCLSFGFTQMKAQKSYATYCVAFYNVENLFDTEDDVDNPGDDEYLPNGANA 60

Query: 46  -SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
            +  +       + +    +  D       I+ + E+ +   +  +              
Sbjct: 61  WTPGKYQKKLDNIAKVISRIGKDYCPAGPAILGVSEVENRRVLEDLVKNER---ISDVGY 117

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
            I H +      I  A+    K  RV           D+      R  + +   + G+ +
Sbjct: 118 EIVHYESPDWRGIDVALLYNPKLFRVTNTVAQPYILPDN-PNFKTRDQLLVSGVLAGEPV 176

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V+  H  S     S E     +        + L D + Q  +     +I GD N   + 
Sbjct: 177 HVIVNHWPSRYGSKSTELREYAASIT-----KSLVDSLQQ-IDPEAKVIIMGDLNDDPDD 230

Query: 218 LGNN-----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                      + K + P        +  D    +          D  ++  +       
Sbjct: 231 RSTRVVLNAKKYQKDVKPGGYYNTMWRLYDLGVGSLGYQGKWNLFDQIIITHSLLGSETS 290

Query: 273 ES--FSEILYNEDDIKSRG-----------------KRLSDHCP 297
               +   ++N+D +  +                     SDH P
Sbjct: 291 SLKFWRSEVFNKDFLIRKEGKRKGYPWRTFDGNTFIDGYSDHFP 334


>gi|326794591|ref|YP_004312411.1| endonuclease/exonuclease/phosphatase [Marinomonas mediterranea
           MMB-1]
 gi|326545355|gb|ADZ90575.1| Endonuclease/exonuclease/phosphatase [Marinomonas mediterranea
           MMB-1]
          Length = 847

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/352 (12%), Positives = 94/352 (26%), Gaps = 71/352 (20%)

Query: 22  QKVRLVSWNINTLSEQE--------GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
             +R+ S+N+  L            G +    S++      T +      LDADIV L E
Sbjct: 454 GDLRIASFNVLNLFNSPFDGAENPFGDNRGAESLEDYNLQLTKIASAITLLDADIVGLME 513

Query: 74  MGSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           + +          A+ +               +   +    ++ I   +  R   V   +
Sbjct: 514 IENNGFDETSAIAALVEAVNTTQPASAAPYAFISADAGYVGSDAIAVGLIYRPSVVTPKK 573

Query: 126 QSY-------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENT 176
           ++            A+ +      R A+    +   + ++I V+  H KS       +  
Sbjct: 574 KAVLIDMPEQHGTDAEGNQFDKYQRTALLQTFKHRRSRERISVVVNHFKSKGSGCIEDAN 633

Query: 177 YSPSC------SLLSQQAQWLKDWITQK-------------KESLVPFVIAGDFNRKINY 217
              S       +     A  L D++ +                   P  +  D+N     
Sbjct: 634 REASDPQSNCSAFRVSAAVALGDYLERNVRGKVMILGDLNSYGKEDPIRVLTDYNAFDPE 693

Query: 218 LGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
                    T++                      P  +     +         +D+ + +
Sbjct: 694 FPVYTAEQATLNGAPINDGESVEVTRNYGFTNLVPHFQGDEAFSYTFNGELGSLDHALAN 753

Query: 264 QNAYKFLIQESFSEILYNEDDIKSR-------------GKRLSDHCPISIDY 302
               K ++      I   E ++                    SDH P+ ++ 
Sbjct: 754 WQLMKHVVDADDWHINSAESNLFEYSSEFTGDLVKSDNAYSSSDHDPVVVEL 805


>gi|322824803|gb|EFZ30090.1| RNA-editing complex protein MP100, putative [Trypanosoma cruzi]
          Length = 968

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 83/294 (28%), Gaps = 34/294 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           + ++L++WN+         +          +   Y +L +  +  DAD+V +QE+     
Sbjct: 692 KTLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVLARVIQQEDADVVGMQEVE---- 747

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    +  F S +  +  +   S      +I+     + V ++ +P+         
Sbjct: 748 -------PVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVP 800

Query: 140 AGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           A          + +++    + V   HL +           S   +L     + L     
Sbjct: 801 AWTNHVSLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTL----- 855

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-LIRFPKEKDSRCNANKNLR--- 252
                    V  GDFN             + +D           +     N    L+   
Sbjct: 856 -----TGDVVTMGDFNDWPTNEFLMPAESQYVDCWPLIYPHDAGKTMDETNTFCKLKVEE 910

Query: 253 -NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPISIDY 302
                 D   +       +          N+++           SDH  +S+ +
Sbjct: 911 MFFGRSDKLFLRSRRLAPVEGHLVGTKSVNDENGNKDAPGYLFPSDHYGVSMTF 964


>gi|242317310|ref|ZP_04816326.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106b]
 gi|242140549|gb|EES26951.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106b]
          Length = 305

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 85/309 (27%), Gaps = 52/309 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM------- 74
            +RL+SWN+    +  G           T D       A+ L D D++  QE+       
Sbjct: 19  TMRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHAL 67

Query: 75  ---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
               S +  A++         +    +                A+  +        + L 
Sbjct: 68  PGGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALP 127

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               + + +  R A+E+ +      + V+  HL+ +            +   L ++A   
Sbjct: 128 WPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAH 185

Query: 192 KDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF----- 237
                  +    PF         ++ GDFN                D    +  +     
Sbjct: 186 ARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHP 245

Query: 238 ---PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P       +  +     +  D+  +     + L +                  R SD
Sbjct: 246 GKTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASD 294

Query: 295 HCPISIDYD 303
           H PI ++  
Sbjct: 295 HQPIVLELS 303


>gi|111073593|emb|CAL29439.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Onchocerca
           volvulus]
          Length = 259

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 86/302 (28%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                        +     +   DI+ LQE          
Sbjct: 2   LKIATWNVN----------------SIRKRIDQICNLIIDNQIDIILLQETKCTE----- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y   + + +            + V  K + + +    ++            
Sbjct: 41  -----KQFPYEEIKKLGYKCAVYGQVARNGVCVLSKYLILEKFKIDIVEGYQEARY---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +V+ + +KI V+ I++ +    DS       + +   +    L + I    ++  
Sbjct: 92  --IECVVKYDNQKIRVVSIYVPNGQSPDS------NAFAYKLKFFDNLYEKIINLLKNEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANK 249
             ++AGD+N  ++ +   D               + +    N       +  +       
Sbjct: 144 LTIVAGDYNVALDGIDVFDPILLNGKVCFHIREREKLRAILNLGFKDAFRISNPDLQQFT 203

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + IDY ++   A   L            DD   + K  SDH P+  
Sbjct: 204 WWHYQDNSFRNNQGMRIDYILLSPQAADRLETCYI-------DDKLRKLKNPSDHTPVIC 256

Query: 301 DY 302
             
Sbjct: 257 VI 258


>gi|238878752|gb|EEQ42390.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 785

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 88/327 (26%), Gaps = 42/327 (12%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +    ++S+N      +  +      +   +      LL +   N + DIV +QE+ 
Sbjct: 448 PESSDNFTVLSYNTLCQHYATPKMYKFTPSWALQWDYRKNLLEKEVLNYNTDIVCMQEVE 507

Query: 76  SYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--- 128
           +        P  T       F+S  R    S+ DS      A   +     ++ +     
Sbjct: 508 TKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKKVDGCATFFKNDKFSLVHKQNFEY 567

Query: 129 --------PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLEN 175
                        KD F+R  N+        L  + +G+KI V++ HL     F D    
Sbjct: 568 NSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKESGEKIAVVNTHLHWDPAFNDVKAL 627

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDFWKTID 229
                   L    +  +   + +       V+ GDFN   +               + ++
Sbjct: 628 QVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFNSVKDSAVYQLFSTGASKGHEDMN 687

Query: 230 PNDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESF 275
             D                            N        IDY            +    
Sbjct: 688 GRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAFTDNIDYIWYSTPTLQVKGLLGRV 747

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            E   +           SDH PI   +
Sbjct: 748 DEEYTSHSIGFPDANFPSDHVPILAKF 774


>gi|331239161|ref|XP_003332234.1| hypothetical protein PGTG_14530 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309311224|gb|EFP87815.1| hypothetical protein PGTG_14530 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 307

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 81/313 (25%), Gaps = 51/313 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKR------TTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +++ ++NI         ++              ++   L+    K    DIV LQE+  +
Sbjct: 9   LKVATFNIRYSPLNVNNTVSTQVPNNGTGEDLWSNRLPLIADQIKWESPDIVALQEVLGH 68

Query: 78  N--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               +        +                      T                P +    
Sbjct: 69  QYVGLKDQLIPAQYASVGVGRNDGVTRGEYVPLFWKTDRFKALSVQYFWLSDKPDVPGSV 128

Query: 136 SFSRAGNRRAVELLVEI----------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
            +  A  R    + ++           + +  +V++ H     F ++ +   + S  L+ 
Sbjct: 129 GWDAAEPRMVTLVTLKPLSTGASPDDQSNQPFYVMNTH-----FDNAGQKARTESAKLIL 183

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNR------------KINYLGNNDDFWKTIDPNDS 233
           ++A  L        E   P ++ GD N             K      +    +       
Sbjct: 184 KKANEL------TSEKGKPVLLIGDLNLVREQSAYQVLTGKATDQPAHRASDRFFQDCGE 237

Query: 234 LIRFPKEKDSRCNANKNLRN--KIPIDYFVM--DQNAYKFLIQESFSEILYNEDDIKSRG 289
            +  P    +             + IDY +           ++       +  + I    
Sbjct: 238 QVGRPFGAHNATFTGFQHDPEDLMKIDYIMTMSSPPNLWQTLKYGVIPNQFQNESI---- 293

Query: 290 KRLSDHCPISIDY 302
             +SDH  +S   
Sbjct: 294 --VSDHRMVSAVI 304


>gi|291298052|ref|YP_003509330.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290567272|gb|ADD40237.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 305

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 74/293 (25%), Gaps = 41/293 (13%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +  +++ ++++N+   ++         S         L+++        I+  QE   +
Sbjct: 45  PATGEQLHVMTFNVRWDTDP--------SPHSWAERRILIKELLGRERPTILGTQEGLLH 96

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                +  +  +   + + R        +     T+         +     P      ++
Sbjct: 97  QGQHLLADQKGYDWVHLSRRGGGED-EATAVLYDTSRLRVTNYGHLWHSDTPQSMGSTTW 155

Query: 138 SRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                R    L      + K+  +++ HL               S     + A  +K+ +
Sbjct: 156 GNEIPRMMTWLRFTDSASDKEFVLVNTHLDH------------KSAPSREKSAAQIKELV 203

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRN- 253
                  VP ++ GDFN               T++                         
Sbjct: 204 ASF---DVPVLVTGDFNTAQGTAPYTTLVDGTTLEDTWETAEQQLTPAYGTFNGWKPEPV 260

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDY 302
                ID+ +                     +     G   SDH  +   +  
Sbjct: 261 DGGDRIDWVLATPGTAVAKTA---------VNTWSVDGLTPSDHWAVQSLVTL 304


>gi|186476236|ref|YP_001857706.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
 gi|184192695|gb|ACC70660.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
          Length = 258

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/300 (9%), Positives = 78/300 (26%), Gaps = 68/300 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N+L                      +  + +    D++ LQE          
Sbjct: 1   MKLATWNVNSL----------------KVRQQHVIDWLELSRTDVLCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  + +  ++  V      ++     F     R
Sbjct: 35  LKLPDEKFPRAELAEKGYRSWFAGQKTYNGVGILVRDG-VSVDEGSIVRNIPGFEDPQQR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + + V+  +  +     + +  Y        +    + +WI+ +     
Sbjct: 94  VIAATV-----EGVRVVCAYFPNGQAPGTDKFAYK------LRWLDAMYEWISSELTQHP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIR----------FPKEKDSRCNANK 249
              + GD+N        +D         + P +                +  D       
Sbjct: 143 KLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAQFNRLIELGLVDSFRLFDQPEKTFT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID+ ++ +                + D    +  + SDH P+  
Sbjct: 203 WWDYRMLAFRRNAGLRIDHILLSKPLAASCTHC-------DVDKTPRKWDQPSDHAPVVA 255


>gi|307609276|emb|CBW98745.1| hypothetical protein LPW_05491 [Legionella pneumophila 130b]
          Length = 251

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 88/286 (30%), Gaps = 50/286 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           V L+++NI+       V                +R     L+ D VFLQE+         
Sbjct: 8   VSLITYNIHKGFGVGAVRFL----------LPEMRDAIAGLNPDFVFLQEVQGKHRKREK 57

Query: 82  KVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           ++           I  +      ++K       H   A+  K      +S  L       
Sbjct: 58  RIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESINLSN----- 112

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
               +R  +   ++++   I +L +HL  F              +  ++Q + L   I  
Sbjct: 113 MNRASRGILHTQLKLDNNIIHLLCVHLGLFK-------------AERTEQCKALIQRIKD 159

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P ++AGDFN   +    +    + +   ++ +    +      +   ++  + +
Sbjct: 160 VVPKNEPLIMAGDFNDWRHV--ISKILAENLGIEEAFVALEGQH---ARSFPAIKPALCV 214

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D         + +                   + LSDH P+   ++
Sbjct: 215 DRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 249


>gi|73666996|ref|YP_303012.1| exodeoxyribonuclease III [Ehrlichia canis str. Jake]
 gi|72394137|gb|AAZ68414.1| Exodeoxyribonuclease III [Ehrlichia canis str. Jake]
          Length = 279

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 82/318 (25%), Gaps = 78/318 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ +WN+N                        LR +    D DI  LQE+   N    
Sbjct: 2   TLKIATWNVN----------------SIRKRLDHLRHWLVKYDIDIALLQEIKCTND--- 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-------------QQSYP 129
                     +     + +    +       +A+  K   V                 Y 
Sbjct: 43  -------QFPFLDLESLGYKCYVNGQKARNGVAIITKYPIVEELVTDIFSSDYKSSLCYK 95

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L      ++   +R  +E +V  N  K+ V  I++ +   +DS       +         
Sbjct: 96  LSSEGFIYNYQESRY-LECVVLYNEVKVRVASIYIPNGQSVDS------DAFQYKLGFFD 148

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSL 234
            L D            ++ GD+N                   +     + ++ I      
Sbjct: 149 QLIDRALFLLNKEEILILGGDYNVAPYPIDVYSTEIMDGRLCFHQYEREKFRVILNLGFT 208

Query: 235 IRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             F    +           K           ID  ++   A   L+     + L   D  
Sbjct: 209 DAFRVLNEHDQK-FSWWNYKAGAWQENRGLRIDNLLLSPQAVDKLLSCVIHDELRGLDT- 266

Query: 286 KSRGKRLSDHCPISIDYD 303
                  SDH P+    +
Sbjct: 267 ------PSDHAPVICTLE 278


>gi|53713851|ref|YP_099843.1| exodeoxyribonuclease [Bacteroides fragilis YCH46]
 gi|60682064|ref|YP_212208.1| exodeoxyribonuclease [Bacteroides fragilis NCTC 9343]
 gi|253565813|ref|ZP_04843268.1| exodeoxyribonuclease [Bacteroides sp. 3_2_5]
 gi|265764197|ref|ZP_06092765.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_16]
 gi|52216716|dbj|BAD49309.1| exodeoxyribonuclease [Bacteroides fragilis YCH46]
 gi|60493498|emb|CAH08285.1| exodeoxyribonuclease [Bacteroides fragilis NCTC 9343]
 gi|251946092|gb|EES86499.1| exodeoxyribonuclease [Bacteroides sp. 3_2_5]
 gi|263256805|gb|EEZ28151.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_16]
          Length = 253

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 87/304 (28%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N+N L       L                ++    + D++ LQE  +      A
Sbjct: 1   MKIITYNVNGLRAAVNKGLP---------------EWLAEENPDVLCLQETKLQPEQYPA 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  +  + +   +          + +A+  K        +   G         
Sbjct: 46  EAFEALGYKAYLYSAQKKGY----------SGVAILTKVEP----DHIEYGMGIEEYDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++  S    D  +       +      +  + ++T+ ++S
Sbjct: 92  GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEAFQKYVTELRKS 139

Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                         +   + +               + 
Sbjct: 140 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRTLYPQKQE 199

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + R           IDY ++ +     L +        +           SDHCP+
Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAVILNNAVH-----------SDHCPM 248

Query: 299 SIDY 302
           +++ 
Sbjct: 249 ALEI 252


>gi|325276378|ref|ZP_08142153.1| exodeoxyribonuclease III [Pseudomonas sp. TJI-51]
 gi|324098490|gb|EGB96561.1| exodeoxyribonuclease III [Pseudomonas sp. TJI-51]
          Length = 264

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R+ ++NIN +S                     L ++ K    DI  LQE        
Sbjct: 2   KNLRIATFNINGISS----------------RLPALLEWLKRERPDIACLQE-------- 37

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                              +            +A+  ++   L+    L G +D      
Sbjct: 38  --LKAADNKFPRQEIEAAGYGCVYQGQPAWNGVAILARDSEPLEVRRGLPGMEDDTQSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A   ++        V  ++L +       +  Y        +  + L         +
Sbjct: 96  LEAAAHGVL--------VGCLYLPNGNPQPGPKFDYK------LRWFECLIQHARTLYAN 141

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++AGDFN     L   D                 ++ +                  
Sbjct: 142 GHPALLAGDFNVVPTDLDIYDTRSWLKDALLQPESRACFEHLLTQGWTDAVRHLYPDERV 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ ++++    +L            D       + SDH P+
Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLNRELSPYLKGAGV-------DAWVRNEAKASDHAPV 254

Query: 299 SIDY 302
            ++ 
Sbjct: 255 WVEL 258


>gi|304392145|ref|ZP_07374087.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130]
 gi|303296374|gb|EFL90732.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130]
          Length = 380

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/377 (13%), Positives = 100/377 (26%), Gaps = 96/377 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKR----------TTSDYTLLRQY------------ 60
            +R+ ++N   L  +   S WK   +R          T + +  L Q             
Sbjct: 2   SLRIATFNAENLMARFDFSGWKREGRRDRSLTLREIETEAQFRALEQARVVSHEDDARQM 61

Query: 61  ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                 +  ADI+ LQE+     +          +           + +    I  AI  
Sbjct: 62  TALAIADCRADIICLQEVEDLATLEAFERNYLLPMTGLDYPQKEWRQGNDGRGIDVAIMA 121

Query: 117 RKK------NVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKK 156
           R+K            +S+      D                +R   R  +E+ +++ GK 
Sbjct: 122 REKTADGEEIEIRSVKSHAGRTMADLEVLTPRLIELGFEKDTRLFRRDCLEVNLKVGGKH 181

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212
             V   H KS             +  +   +A  +K  I  +    + + + +++ GD N
Sbjct: 182 FTVFVAHFKSMGGPRGGLTGRDFTMPVRQAEAAGVKRIIEDRFGAERAADMRWMVCGDLN 241

Query: 213 RKINYLGN---------NDDFWK-------TIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                L            D   +        +D   ++    +              K  
Sbjct: 242 DYAARLAITGDKAAGHSFDWIAEETHGSAPLLDDGFAINLVDRRAQDDRWTLFYANGKSA 301

Query: 257 ---------------IDYFVMDQNAYK---FLIQESFS------------EILYNEDDIK 286
                          +DY +      K     + +               + +       
Sbjct: 302 SARLPQERPTRHLVQLDYLLASPRLAKGNAKAVPDIIRNGQPYRTVFPPDQEVERYPRTG 361

Query: 287 SRGKRLSDHCPISIDYD 303
               + SDHCP+ +  D
Sbjct: 362 WDRPKASDHCPVVVSLD 378


>gi|296085488|emb|CBI29220.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 84/331 (25%), Gaps = 52/331 (15%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             LVS+NI      +        +   +  +    +    +NL AD + LQE+  Y++  
Sbjct: 58  FSLVSYNILAQVYVKSSLFPHSPSPCLKWKARSQAILTVLRNLGADFLCLQEVDEYDSFY 117

Query: 82  KV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--------------- 125
           K     N +   Y       H         ++A  V ++ +                   
Sbjct: 118 KGNMDSNGYSSIYVQRSGQKHDGCGIFYKHNSAELVLEEKIEYNDLVDLNDDGSYSNDRH 177

Query: 126 ---------------QSYPLLGAKDSFSRAGNRR-------AVELLVEINGKKIWVLDIH 163
                           S P    ++       R         +     +      ++ + 
Sbjct: 178 CDTPASANSDAEPKKGSSPQNTTEERGDPNDPRVRLKRDCVGIMAAFRLKDPSHHLVIVA 237

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
                +     +        L  +    K  ++ K E     ++AGDFN           
Sbjct: 238 NTHLYWDPEWADVKLAQAKYLLSRLAQFKTVVSDKFECTPSVLVAGDFNSTPGDKVYQYL 297

Query: 224 FW-----KTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ- 272
                    ++  D L       +   +      N        +DY     + +   +  
Sbjct: 298 VSGNSSVPQLECLDGLPIPLCSVYDFTRGEPPFTNCTPDFTNTLDYIFFSPSGHIKPVSF 357

Query: 273 -ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            E       +           SDH PI  ++
Sbjct: 358 LELPEPDSSDVAGGLPNHHHPSDHLPIGAEF 388


>gi|239942790|ref|ZP_04694727.1| hypothetical protein SrosN15_17486 [Streptomyces roseosporus NRRL
           15998]
 gi|239989249|ref|ZP_04709913.1| hypothetical protein SrosN1_18253 [Streptomyces roseosporus NRRL
           11379]
 gi|291446259|ref|ZP_06585649.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291349206|gb|EFE76110.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 294

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 82/290 (28%), Gaps = 59/290 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYN 78
            +R+ ++NI+  +  +G             D        ++L+AD++ LQE+     S +
Sbjct: 49  PLRVATYNIHAGAGMDGAF-----------DLDRQTAELRSLNADVIGLQEVDRHWGSRS 97

Query: 79  AVAKVFPKN-----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +  +       +  F     L          +   A+  R + VR        L  
Sbjct: 98  EWRDLAGELARRLRMYVSFAPIYSLDPAEPGGPRAEYGVAVLSRHRIVRAENHEITRLST 157

Query: 134 KDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +D            E++V + G  + V   HL            Y P  ++   Q    +
Sbjct: 158 QDPNPVPAPAPGFGEVVVRVRGLPVHVYVTHL-----------DYRPDPAVRVAQIADTR 206

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             + + +    P ++ GD N +          W+ +   D                    
Sbjct: 207 RIMAEDRG---PKILLGDLNAEPA-APELAPLWRELTDADP----------GAPTFPAQD 252

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ID+  + ++                           SDH  +  D 
Sbjct: 253 PVKRIDFVAVSKD-------------RTGVRRAWVPESLASDHRAVVADL 289


>gi|237717287|ref|ZP_04547768.1| metallophosphoesterase [Bacteroides sp. D1]
 gi|237719038|ref|ZP_04549519.1| metallophosphoesterase [Bacteroides sp. 2_2_4]
 gi|262406053|ref|ZP_06082603.1| metallophosphoesterase [Bacteroides sp. 2_1_22]
 gi|293371916|ref|ZP_06618320.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|294648117|ref|ZP_06725660.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294806860|ref|ZP_06765685.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|298480123|ref|ZP_06998322.1| secreted protein [Bacteroides sp. D22]
 gi|229443270|gb|EEO49061.1| metallophosphoesterase [Bacteroides sp. D1]
 gi|229451816|gb|EEO57607.1| metallophosphoesterase [Bacteroides sp. 2_2_4]
 gi|262356928|gb|EEZ06018.1| metallophosphoesterase [Bacteroides sp. 2_1_22]
 gi|292633162|gb|EFF51739.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292636501|gb|EFF54976.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294445889|gb|EFG14531.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|295085514|emb|CBK67037.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A]
 gi|298273932|gb|EFI15494.1| secreted protein [Bacteroides sp. D22]
          Length = 263

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 80/288 (27%), Gaps = 67/288 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++++N+                    +    L  + K+   D V LQE+ S     + 
Sbjct: 27  VRVMTYNLRFG---------------ELASLEELAHHIKSFKPDFVALQEVDSKTDRKRT 71

Query: 84  FPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +          Y T     + K    +  +  I +  K   +  Q   L        R
Sbjct: 72  PHQKGKDFISELAYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHER 131

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  +E L E+    I     HL               S    ++Q +++        
Sbjct: 132 ---RAMLEGLFEMGNDTIVFTSTHL------------DVNSQETRAEQIKFITGHFKNY- 175

Query: 200 ESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               P ++ GDFN +            F  + D                      +  I 
Sbjct: 176 --KYPVILGGDFNARHYSEAIRGMDSWFAASNDD---------------FGMPAWKPVIK 218

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           IDY          +I     + L            LSDH PI  + ++
Sbjct: 219 IDYLFAYPQKGWRVISTQTVQSL------------LSDHLPIITELEY 254


>gi|237740967|ref|ZP_04571448.1| exodeoxyribonuclease III [Fusobacterium sp. 4_1_13]
 gi|294784430|ref|ZP_06749721.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_27]
 gi|229431011|gb|EEO41223.1| exodeoxyribonuclease III [Fusobacterium sp. 4_1_13]
 gi|294488002|gb|EFG35357.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_27]
          Length = 253

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                 +       Y    +ADI  LQE    +A    
Sbjct: 1   MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLTVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                         + ++   ++   
Sbjct: 91  -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMTWEDEFRKYLKNLEKKK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +  +  +  F     +     
Sbjct: 138 PVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +   K L+       +             SDHCP+ 
Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQI-----------EGSDHCPVV 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 LILDF 251


>gi|169116575|gb|ACA42592.1| Mpc [Enterobacter sp. Ceibso-001]
          Length = 253

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 75/286 (26%), Gaps = 49/286 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SLKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P      F +     +++        + H   AV  +                S
Sbjct: 59  MHFENWPDTPHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              +  R  +   +        +    +                 +    Q Q L DW  
Sbjct: 114 VGESEKRGLLYCRITPPALDFPIHVGCVHLGLR-----------EAHRQAQLQMLADWTN 162

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P V+AGDFN       +       ++       F + +             + 
Sbjct: 163 A-LPEGEPVVVAGDFNDWRQRANHPLKVKAGLEE-----IFTRSRGRPARTFPVRFPLLR 216

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +                           + LSDH P+S + 
Sbjct: 217 LDRIYVKNAHASS-----------PTALALLNWRHLSDHAPLSAEI 251


>gi|225456791|ref|XP_002277389.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297733638|emb|CBI14885.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/339 (12%), Positives = 97/339 (28%), Gaps = 85/339 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++ ++WN N+             + R  +++    ++  +LD D++ +QE+    A +
Sbjct: 38  EPLKFLTWNANSF------------LIRVKNNWPEFTKFVSDLDPDVIAVQEVRMPAAGS 85

Query: 82  KVFPKNTWC----------------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           K  PKN                      S     N+    S  D   A            
Sbjct: 86  KGAPKNHGELKDDTSSSREEKKILMHALSRPPFGNYRVWWSLADSKYAGTALFVKKCFQP 145

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           +       + +       R +    E       +L+ ++ +  + D        S     
Sbjct: 146 KKVSFSIDQKASKHEPEGRVILAEFE----SFRLLNTYVPNNGWKDEET-----SFQRRR 196

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-------------------------- 219
           +  + + +++   + S  P +  GD N     +                           
Sbjct: 197 KWDKRMLEFV--VQSSDKPLIWCGDLNVSHEEIDVSHPEFFSAAKHNGYVPPNKEDCGQP 254

Query: 220 -----NNDDFWKTIDPNDSLIRFP----------KEKDSRCNANKNLRNKIPIDYFVMDQ 264
                    F   +     +  +               S     K    ++ IDYF++ +
Sbjct: 255 GFTLAERRRFGGILKEGKLVDAYRLLHKEKDMEGGFSWSGNPIGKYRGKRMRIDYFIVPE 314

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ++             I+ +G   SDHCP+S++  
Sbjct: 315 ALKDRIVACEIH-----GQGIELKGFYGSDHCPVSLELS 348


>gi|270339983|ref|ZP_06006639.2| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bergensis DSM 17361]
 gi|270333044|gb|EFA43830.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bergensis DSM 17361]
          Length = 361

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/352 (12%), Positives = 91/352 (25%), Gaps = 63/352 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------S 46
           M +K +L  +      + S  +K  +     +N   L +        +            
Sbjct: 1   MKQKVMLFALMLSAMLSVSAQKKFSVYAVGFYNQENLFDTCHDEGKNDHEFLPTGSYRWD 60

Query: 47  VKRTTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             + T     + +   ++           I+ L E+ +   +  +  +       +    
Sbjct: 61  GLKYTRKLRNMARALSDMGTGTLPGVGCAIIGLSEVENAKVLTDLCNQPELQ---ARNYQ 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +      I  A+       RV   +  P +  +   S    R  + +  E+ G+ +
Sbjct: 118 FCHVEGPDKRGIDCAVLYNPSLFRVKDVKLVPYVPTEKQNSDFKTRGFLTVSGELAGEHV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            V+  HL S           +        QA+ +KD + Q  +      + GD N     
Sbjct: 178 AVIVCHLPSRFSGSYYREVGAA-------QAKAVKDSLLQN-DKNCKVFVMGDMNDDPTN 229

Query: 218 LGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                     +D  K  + +     +                    D  ++  N      
Sbjct: 230 KSMCEILRGKEDIAKVGEGDMYNPWYNILTKQGTGTLMYQGGWNLFDQILLSPNLLNPKG 289

Query: 272 QESFSEILY-----------------------NEDDIKSRGKRLSDHCPISI 300
              F E+ Y                                   SDH P+ +
Sbjct: 290 SRDFRELKYWKCEIQRMPYLFQTEGKYKGSPKRTTAGGVWLDGYSDHLPVCV 341


>gi|224367710|ref|YP_002601873.1| hypothetical protein HRM2_05950 [Desulfobacterium autotrophicum
           HRM2]
 gi|223690426|gb|ACN13709.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 253

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 83/290 (28%), Gaps = 44/290 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +      ++++N+      +G   W+N  K             ++   D V  QE+ ++ 
Sbjct: 2   TDPGSFSVMTFNLRFGLADDGPDCWENRKKGYPL-------LFEHYQPDFVGFQEVNNFQ 54

Query: 79  A--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           A  + ++     +     T   +  +         T  A     +    Q    L     
Sbjct: 55  ADFLCRLLDGYGFIGRRDTSPELWQNNLIFYRKQWTCKAANHLFLSRTPQKESRLDGSRW 114

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R+      E     + + + H                + ++ +  A  + D+++
Sbjct: 115 -----PRQCTLGQFEQGDMAVVMANTHFDF-------------AETVQALSAGLVVDFLS 156

Query: 197 QKKE---SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           +      + +P VI GDFN       +     +    N     F        +       
Sbjct: 157 EFSPGSLTDLPTVITGDFNSIPGGAAH-----RVFLDNGFEDAFENAHAYTFHGFTGKDR 211

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ID+ +              + +       +  G   SDH P+ +++ 
Sbjct: 212 GGHIDWILYRG---------GITPLNQKIVRERFSGHFPSDHFPVLVEFT 252


>gi|159028078|emb|CAO87155.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 260

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 78/286 (27%), Gaps = 34/286 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+  +S+NI           W             +     +   DI+  QE  +   +  
Sbjct: 2   KLTAMSFNIRYDKPDPDERNW-------RVRREAVAALIAHYSPDIIGTQEARANQLLDL 54

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA-KDSFSRAG 141
                 +    S  R     +  +     + +   +     L ++  ++G+  +++    
Sbjct: 55  HRLLPKYQSLGSDRRGTGLDEHCAILYQPSRLKCLEIYEFWLSETPDVIGSITEAWGNPY 114

Query: 142 NRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R         + G+ +   + HL  +   D  ++  +        Q    KD++     
Sbjct: 115 PRMVTGAKFRTLEGQTLQFYNTHLDYYS--DKAKDLGAKCIQERFCQLDLTKDYL----- 167

Query: 201 SLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 + GDFN     L            I   D+L      +    N   +      I
Sbjct: 168 -----FLTGDFNVNSQRLPRQILTQPLQSEIKLKDALADLELAEQMSFNNYTDTPYLA-I 221

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D    D       +           D  +      SDH P+   + 
Sbjct: 222 DTIYYDSRLQLDWV---------KVDPSRWLNLIPSDHYPVIAAFT 258


>gi|157158045|ref|YP_001461980.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E24377A]
 gi|300822925|ref|ZP_07103060.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 119-7]
 gi|300922814|ref|ZP_07138900.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 182-1]
 gi|301327982|ref|ZP_07221147.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 78-1]
 gi|331667154|ref|ZP_08368019.1| putative cytoplasmic protein [Escherichia coli TA271]
 gi|331676525|ref|ZP_08377221.1| putative cytoplasmic protein [Escherichia coli H591]
 gi|157080075|gb|ABV19783.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E24377A]
 gi|300420846|gb|EFK04157.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 182-1]
 gi|300524466|gb|EFK45535.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 119-7]
 gi|300845547|gb|EFK73307.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 78-1]
 gi|320198979|gb|EFW73576.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli EC4100B]
 gi|331065510|gb|EGI37403.1| putative cytoplasmic protein [Escherichia coli TA271]
 gi|331075214|gb|EGI46512.1| putative cytoplasmic protein [Escherichia coli H591]
          Length = 253

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRVHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|332187443|ref|ZP_08389181.1| calx-beta domain protein [Sphingomonas sp. S17]
 gi|332012604|gb|EGI54671.1| calx-beta domain protein [Sphingomonas sp. S17]
          Length = 1645

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 79/303 (26%), Gaps = 49/303 (16%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMGSYN 78
            A  + + ++N+  L   +               + +L           DI+ +QE+   +
Sbjct: 856  ANHLSIATYNLENLDPSDN-------------KFDVLASNIVYNLRAPDILAVQEIQDAD 902

Query: 79   AVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                                        +          N +  + N +I          
Sbjct: 903  GAGTGSDLSGTVTAQGLIDSIYAQSGLRYAYIEVAPTTANSTGGEPNGNIRNGFFYNVDR 962

Query: 121  VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP- 179
            V  ++ S  L+      +   +R  +    E  G+K+  +D+H  S    D L     P 
Sbjct: 963  VSYVEGSAALITGSAYNN---SRNPLVAQFEFAGQKVTAIDVHFTSRGGSDPLWGNNQPP 1019

Query: 180  ---SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                 +  + QA  +K +I +           + GD+N                      
Sbjct: 1020 ADAGDAARTAQAAGVKAYIQEHLADDPSFNVAVLGDWNGFYFEEAQTQLTDPA-KGGVLT 1078

Query: 235  IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                        +     N   ID  ++          +S        +D      R +D
Sbjct: 1079 NLNTLLSPEERYSYLFGGNAQQIDNILVTGGLVTNAQYDSVHLNSQFGED------RATD 1132

Query: 295  HCP 297
            H P
Sbjct: 1133 HDP 1135


>gi|327402657|ref|YP_004343495.1| exodeoxyribonuclease III Xth [Fluviicola taffensis DSM 16823]
 gi|327318165|gb|AEA42657.1| exodeoxyribonuclease III Xth [Fluviicola taffensis DSM 16823]
          Length = 254

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 88/306 (28%), Gaps = 79/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++L+S+N+N +    G S   +                K + AD++ LQE  +     + 
Sbjct: 1   MKLLSFNVNGIRAIAGKSFLTD---------------MKEMQADVICLQETKATVEQVLE 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V P +   ++ +           +    ++  A+  K   +       +   D   R  
Sbjct: 46  TVNPLDYPFVYANE----------AGRKGYSGTAIISKVEPLSVVYDMGVSHHDEEGR-- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++     K +++ +++ +               +      + L+         
Sbjct: 94  -------VICAEYDKFYLITVYVPNSGSELLRLPYRKTWDADFLSYLKNLEA-------- 138

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS---------------LIRFPKEKDSRCN 246
             P V+ GDFN     +                              L+   + K+    
Sbjct: 139 KKPVVVCGDFNVAHKAIDLARPKANYNKSAGFMQEEIDGMDAFTANGLVDSWRAKNGDEV 198

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF++ +     + + +    ++            SDHCP
Sbjct: 199 KYTWWSYRGGAREKNVGWRIDYFLVSEGFVPKIKEATIHNEIF-----------GSDHCP 247

Query: 298 ISIDYD 303
           + ++  
Sbjct: 248 VGVELS 253


>gi|300790754|ref|YP_003771045.1| endonuclease/exonuclease/phosphatase family protein [Amycolatopsis
           mediterranei U32]
 gi|299800268|gb|ADJ50643.1| putative endonuclease/exonuclease/phosphatase family protein
           [Amycolatopsis mediterranei U32]
          Length = 821

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/328 (10%), Positives = 81/328 (24%), Gaps = 69/328 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN 78
             ++ + ++N+  L+  +             + Y  L +         DIV L+E+    
Sbjct: 492 TGELAVATYNVENLAPGDP-----------QAKYDRLGEAVVTHLATPDIVNLEEIQDNT 540

Query: 79  AVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                                V        +   + + +        +I  A       V
Sbjct: 541 GATDDGTVAADQTLQKFTDAIVAKGGPRYQWREIDPVNDQDGGQPGGNIRVAFLFNPARV 600

Query: 122 RVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
             + +                       P      + +   +R+ +       G+ ++V+
Sbjct: 601 SFVDRPGGTSTTAVGVVREHGKAHLTASPGRVDPANEAWTTSRKPLAGEFVFKGRTVFVI 660

Query: 161 DIHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRK 214
             H  S          + P         ++QA  L+ ++      +     V+AGD N  
Sbjct: 661 ANHFNSKGGDQPTHGRFQPPARSSEVQRAKQATVLRGFVDSLLAADRNANIVVAGDLNDY 720

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                                      ++   +         +D+ +  +      +   
Sbjct: 721 PFSP----AVQTLTAGGVLKDLIASVPEAERYSYVFEGQSQVLDHILASR--APRGVDYD 774

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
              I            + SDH P  I +
Sbjct: 775 VVHINA------EFADQASDHDPQVIRF 796


>gi|256846719|ref|ZP_05552175.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_36A2]
 gi|256717939|gb|EEU31496.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_36A2]
          Length = 253

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                 +       Y    +ADI  LQE    +A    
Sbjct: 1   MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                         + ++   ++   
Sbjct: 91  -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMTWEDEFRKYLKNLEKKK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +  +  +  F     +     
Sbjct: 138 PVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +   K L+       +             SDHCP+ 
Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQI-----------EGSDHCPVV 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 LILDF 251


>gi|114327927|ref|YP_745084.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1]
 gi|114316101|gb|ABI62161.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1]
          Length = 259

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 72/305 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            V++ +WN+N                        +  + +    DI+ LQE+    A   
Sbjct: 2   PVKIATWNVN----------------SIRQREGHVLSWLERNQPDILLLQEIKCETAA-- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAG 141
                           + +         +  +AV  +    V Q++ P L   D+ +R  
Sbjct: 44  --------FPAQAFAKLGYQAEAVGQKAYNGVAVLSRVPFEVTQRTLPGLPPDDAQARYI 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             RA+  ++          +++L +          Y           + L         +
Sbjct: 96  EIRALNTIIG---------NLYLPNGNSGGEAGYAYK------LGWMEHLAQHAASLLAA 140

Query: 202 LVPFVIAGDFNRKINYL-------GNNDDFWKTIDPNDS-------LIRFPKEKDSRCNA 247
               ++AGD+N                D   +              L    +        
Sbjct: 141 GEDLILAGDYNVCPTEEDYAPGALPPEDALLRPETRARFRSLLWLGLTDAVRAMRPSGQI 200

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ ++     + L       I    D ++    + SDH P+
Sbjct: 201 YTFWDYQAGAWPRDRGLRIDHALLSSRMAERL-------IEALPDRMERDQPQPSDHVPV 253

Query: 299 SIDYD 303
            I ++
Sbjct: 254 IISFE 258


>gi|332089000|gb|EGI94112.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           boydii 5216-82]
          Length = 253

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++ GDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVEGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|302766483|ref|XP_002966662.1| hypothetical protein SELMODRAFT_86257 [Selaginella moellendorffii]
 gi|300166082|gb|EFJ32689.1| hypothetical protein SELMODRAFT_86257 [Selaginella moellendorffii]
          Length = 334

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 84/332 (25%), Gaps = 52/332 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            R+VS+NI         SL+ +S     +  +    +     +LDAD++ LQE+  + + 
Sbjct: 1   FRVVSYNILAQVVYVKSSLFPHSPSLCLKWKTRSEQVLSRLLSLDADLLCLQELDEFESF 60

Query: 81  AK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------------------IAVRKK 119
            K +     +   Y                                        + +  +
Sbjct: 61  YKPLLESRGYSSIYVQRSGKKRDGCGIIYKAKCFSTITTSRLMKPQPEERRNPSVYIHTR 120

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRR-----AVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
              V   S P        S    R       +      +     ++ I      +  +L+
Sbjct: 121 RCIVSDFSVPEEENDRDVSDPRVRFRRNCVGIFSAFRFHHAPSNIVVIANTHLYWDPALQ 180

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS- 233
           +        L  +    +  I+Q+  S    ++AGDFN        N       +     
Sbjct: 181 DVKLAQAKYLLAKLLQFEKEISQEFNSNPVVLVAGDFNSTPGDRVYNYITSGRRNSGPDI 240

Query: 234 --------------------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN--AYKFLI 271
                                  +   +      N        +DY     +       I
Sbjct: 241 ELSSFKVPDLESLKVPAIPLDSLYAAAQGEPAFTNCTPDFTGTLDYIFFSPSASMRPKTI 300

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            E       +           SDH PI  D+ 
Sbjct: 301 LEVPRPDAPDVKGGLPNHFHPSDHLPIGADFS 332


>gi|218196725|gb|EEC79152.1| hypothetical protein OsI_19821 [Oryza sativa Indica Group]
          Length = 377

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/341 (13%), Positives = 85/341 (24%), Gaps = 48/341 (14%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L F  V  T +   + RLVS+NI      +        ++  +  +    +    K+ +A
Sbjct: 31  LPFVPVWVTGAAGYQFRLVSYNILAQVYVKSAFFPHSPSACLKWKTRSKAVLSELKSFEA 90

Query: 67  DIVFLQEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN----- 120
           D++ +QE+  Y+    K    + +   Y                  +   V+K+      
Sbjct: 91  DLMCIQELDEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSMELVQKEVLHYND 150

Query: 121 --------------------VRVLQQSYPLLGAKDSFSRAGNR-----RAVELLVEINGK 155
                                                +    R       +    ++N  
Sbjct: 151 LVEKYVHTDHVNSDTSNNSSPTEEASKKVDNNKHGDPNDPRFRLKRDCVGLLAAFKLNDP 210

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-------KDWITQKKESLVPFVIA 208
              +L +      +             +   QA++L       +  I+ K       +IA
Sbjct: 211 CDHILIMANTHIYW-QVKWPEDPEWIDVKLAQAKYLLSRVTQFEKLISNKFNCKPSVMIA 269

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           GDFN        N       D  D         +          N        +DY  + 
Sbjct: 270 GDFNSTPGDKVYNYLVSANSDSTDEAPIKLRSLYAANGGEPEFTNCTPGFTGTLDYIFLS 329

Query: 264 QNAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +                            SDH PI  D+
Sbjct: 330 DGSSVKPTSLLRIPRGDSAEVQGGLPNFHHPSDHLPIGADF 370


>gi|260827819|ref|XP_002608861.1| hypothetical protein BRAFLDRAFT_102054 [Branchiostoma floridae]
 gi|229294215|gb|EEN64871.1| hypothetical protein BRAFLDRAFT_102054 [Branchiostoma floridae]
          Length = 537

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 81/317 (25%), Gaps = 69/317 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+N+   +        +  VK        L Q   +  ADI+ LQE+    A  + 
Sbjct: 246 LKIASYNVWNFN-----GGPEGRVKAYVERAQHLGQVLADCAADIIALQEV--RFAYNRG 298

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHT---------AIAVRKKNVRVLQQSYPLLGAK 134
            P     I + T  L  +         +           +A+  K   +      L    
Sbjct: 299 GPLGPNQIQHFTHYLPGYQYVFQPAMSYPESILGRVEEGVAIISKFPIITHDYILLYRNA 358

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  +   +E     +  L +   S                    Q + +   
Sbjct: 359 SDSEDFHQRICLHAEIETPYLGLVHLFVTHLSLSEP---------------AQDKSVVQI 403

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
               +    P V+ GD N +           + +   + + R   E+       K    +
Sbjct: 404 WEFMQRFSGPAVLMGDLNTEPGSKAI-----RFLQGVEEIDRVKTEELQDAWLMKYPEPR 458

Query: 255 I---------------------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                                        IDY  +   +   L   S        DD K 
Sbjct: 459 ADRDGTYWRNEIRDSGLTFNALKSHLEKRIDYMFVRLPSDVRLHNISL------LDDGKR 512

Query: 288 RGKRLSDHCPISIDYDF 304
                SDH  +   + F
Sbjct: 513 GYAAASDHVGLMGTFTF 529


>gi|126433169|ref|YP_001068860.1| exodeoxyribonuclease III [Mycobacterium sp. JLS]
 gi|126232969|gb|ABN96369.1| Exodeoxyribonuclease III [Mycobacterium sp. JLS]
          Length = 267

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/304 (9%), Positives = 68/304 (22%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  + +  D D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRARVDRVTDWLERADVDVLAMQETKCNDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       +    +A+  +                        
Sbjct: 41  ------QFPTMPFAALGYDVVHCGFNQWNGVAIASRVGLDDVAVGFDGQPTWCDKPDIEA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    +      + V  +++ +  F+ S    Y        +    L+           
Sbjct: 95  AAEARALGATCAGVRVWSLYVPNGRFVGSPHYAYK------LEWLAALRKTAHGWLTENP 148

Query: 204 --PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P  + GD+N                           +  I                  
Sbjct: 149 ALPIAMVGDWNIAPTDDDVWSVEAYQDSTHVTPPERQAFTEIVDAGYADVVRPFTPGPGV 208

Query: 247 ANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +        + ID+ +        +               + +GK  SDH P+
Sbjct: 209 YTYWDYTRLAFQKRRGMRIDFILGSPAFADRVTHAEIV-------REERKGKGASDHAPV 261

Query: 299 SIDY 302
            +D 
Sbjct: 262 LVDL 265


>gi|321313648|ref|YP_004205935.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BSn5]
 gi|320019922|gb|ADV94908.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BSn5]
          Length = 252

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 86/304 (28%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L              R          Y K  DADI+ LQE    +    +
Sbjct: 1   MKLISWNVNGL--------------RAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  + ++++           +    ++  AV  K   +       +   D   R    
Sbjct: 47  QPE-GYHVYWN----------YAVKKGYSGTAVFSKQEPLQVIYGIGVEEHDQEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  + ++V+ ++  +        +        L      L            
Sbjct: 92  -----VITLEFENVFVMTVYTPNSRRGLERIDYRMQWEEALLSYILELDQ--------KK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + +        +  F         A 
Sbjct: 139 PVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAFTRFLEAGFVDSFRHVYPDLEGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ ++  + +   S            S     SDHCP+ 
Sbjct: 199 SWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASI-----------SADVMGSDHCPVE 247

Query: 300 IDYD 303
           +  +
Sbjct: 248 LIIN 251


>gi|209551337|ref|YP_002283254.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209537093|gb|ACI57028.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 267

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 76/307 (24%), Gaps = 68/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       ++ Q       DI+ LQE    N +   
Sbjct: 3   FSITTWNIN----------------SVRLRMPIVEQLVLKHRPDILCLQETKVTNELFPA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P            +            +  +A+  +            G  D+       
Sbjct: 47  APL---------RAMGYDHIIIHGQKGYHGVAIASRIPLTEDHRQDYCGVGDARH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  + E   ++I + + ++ +    D  + T +P         + +   +    E+  
Sbjct: 93  --ISAIFEHGNRRIRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEANT 147

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N                   +     D   + +   + L    +        
Sbjct: 148 SAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLLEVMKRGNWLDLMRQHVPESEKL 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    L                    R SDH P
Sbjct: 208 YTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLK-------RIEILKEARGWDRPSDHVP 260

Query: 298 ISIDYDF 304
           ++  +DF
Sbjct: 261 VTAHFDF 267


>gi|146337348|ref|YP_001202396.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp.
           ORS278]
 gi|146190154|emb|CAL74146.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp.
           ORS278]
          Length = 271

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 73/306 (23%), Gaps = 64/306 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L +WNIN                       L+ ++ K +  D++ LQE      +   
Sbjct: 3   LVLTTWNIN----------------SVRLRIDLVAKFIKQVRPDVLCLQE---TKCIDDA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +       RL       +    +  +AV  K               D      +R
Sbjct: 44  FPLKRFK------RLGYEHVALNGQKGYHGVAVISKWPFESTHVRTFCDKVD------SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  E       ++  +       D  +   +P      Q    +K           
Sbjct: 92  HITVAFGEKAQLAQPLVLHNFYVPAGGDIPDPALNPKFEHKLQFLDEMKACEPLHPRGDD 151

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N   +                     +         + +    +        
Sbjct: 152 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPIETEKLLAAQSHGEWVDVARERIPMSEKV 211

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  + +               ++        +R SDH P
Sbjct: 212 YTWWSYRAADWTVGDRGRRLDHIWVSRALKDR-------VSDFDILRDARSWERPSDHVP 264

Query: 298 ISIDYD 303
           +++  D
Sbjct: 265 VTVTLD 270


>gi|53726143|ref|YP_103011.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei ATCC 23344]
 gi|52429566|gb|AAU50159.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei ATCC 23344]
          Length = 324

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 85/309 (27%), Gaps = 52/309 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM------- 74
            +RL+SWN+    +  G           T D       A+ L D D++  QE+       
Sbjct: 38  TMRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHAL 86

Query: 75  ---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
               S +  A++         +    +                A+  +        + L 
Sbjct: 87  PGGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALP 146

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               + + +  R A+E+ +      + V+  HL+ +            +   L ++A   
Sbjct: 147 WPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAH 204

Query: 192 KDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF----- 237
                  +    PF         ++ GDFN                D    +  +     
Sbjct: 205 ARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHP 264

Query: 238 ---PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P       +  +     +  D+  +     + L +                  R SD
Sbjct: 265 GKTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASD 313

Query: 295 HCPISIDYD 303
           H PI ++  
Sbjct: 314 HQPIVLELS 322


>gi|308446216|ref|XP_003087123.1| hypothetical protein CRE_30356 [Caenorhabditis remanei]
 gi|308261295|gb|EFP05248.1| hypothetical protein CRE_30356 [Caenorhabditis remanei]
          Length = 297

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 81/322 (25%), Gaps = 80/322 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            Q +R+ S N+N +                 +    +  +  +   D++ +QE+ + ++ 
Sbjct: 12  TQTLRVASVNVNGVRA---------------AFRKGMGDWLASRGVDVLAMQEVRADDSH 56

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                 + W I +             N      +A+  +   V  +            ++
Sbjct: 57  LAELFGDEWQILHDPC----------NIKGRAGVAIASRVPAVAHRVGLGSAEDQERIQS 106

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  +E   E+ G+ + V+  +  S       +                +   + Q   
Sbjct: 107 SGRW-IEADFEVGGELVTVISNYTHSGEVDTPRQEAK-------WAFLDAMGVRLDQLAA 158

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRC---------- 245
                 I GDFN         +          +    +                      
Sbjct: 159 ERELVTIVGDFNVGHREFDIKNWKGNVKRSGFLPRERAYFDRFFGPRGETVVGVDGSEGV 218

Query: 246 ----------------NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
                                  N+           IDY V+     +           Y
Sbjct: 219 GHGWIDVGRRWAGEVDGPYSWWSNRGQAFDNDTGWRIDYHVVTPQLGER-------VENY 271

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
             D   S  +R SDH P+ +DY
Sbjct: 272 VIDRAASYDERWSDHAPVVVDY 293


>gi|260772409|ref|ZP_05881325.1| hypothetical protein VIB_000857 [Vibrio metschnikovii CIP 69.14]
 gi|260611548|gb|EEX36751.1| hypothetical protein VIB_000857 [Vibrio metschnikovii CIP 69.14]
          Length = 318

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 101/322 (31%), Gaps = 47/322 (14%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            + L + N+ N L        + N  + ++            + L+AD++  QE+ S+ A
Sbjct: 2   TITLATINLFNYLEPPNAFYQFDNIYTNEQWQKKNAWFATKIQQLNADVIGFQEVFSFAA 61

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + +      +          +    D     H  +A+  +           +  + + + 
Sbjct: 62  LRQQMNALGYPHVVCV---DSPMIEDDYIYRHPVVALASRYPLTQVSPLQAVLPEQNQAF 118

Query: 140 AGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW---- 194
           + +R  +   +E+     I V  +H KS    ++     +P+  +   Q + L  W    
Sbjct: 119 SFHRIPLHATIEVPKLGAIDVYVVHFKSQRATEA---AQAPNNLVEEWQQETLGRWLSTV 175

Query: 195 -------------ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI----DPNDSLIRF 237
                        I  ++++  PFV+ GDFN+ +++        + +    +  D L  +
Sbjct: 176 QRGFEVNLTHQYIIHTRQKTQRPFVLMGDFNKPLHHEEFQGLMSQALYRKPETQDPLSDY 235

Query: 238 PKEKDSRCN----------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD--- 284
                                        +DY ++  +          +   Y   D   
Sbjct: 236 VFYDSWDIYSEATGQMRQATYYAGATGSVLDYILLSADFSPLSTAPKGNISGYTVLDQHL 295

Query: 285 ---IKSRGKRLSDHCPISIDYD 303
                +     +DH  +++   
Sbjct: 296 VNPSFADDSFSTDHALVAVTIT 317


>gi|258516632|ref|YP_003192854.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780337|gb|ACV64231.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 236

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 83/280 (29%), Gaps = 51/280 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + ++++S+NI +    +                + +    K   AD+V LQE   Y   
Sbjct: 2   TKPIKILSFNIQSGMGMDN-----------RRSLSRIAWVIKCSGADLVGLQETDKYMKR 50

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +    +            +                +  K      ++  L G        
Sbjct: 51  SCFSSQARKLARLLGMHYVFGGACKPAFFSRFGNTILSKYPIKGHKNTLLPGTG------ 104

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  +++L+ IN KKI   + HL               S S   +Q   + + + + + 
Sbjct: 105 EQRALLDVLININNKKIRFCNTHLGL-------------STSSRQKQVNKIIELLGEIQ- 150

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             +P ++ GDFN   N           ++         + K++      + R    +DY 
Sbjct: 151 --LPTILTGDFNTTPNDPVIEQ-LRACLERK---SVSTESKNNDLKTYPSDRPSEKLDYI 204

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +          +   +             + SDH P+  
Sbjct: 205 FLS------AHWKEICQTTLPG--------QASDHLPLLA 230


>gi|237712922|ref|ZP_04543403.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D1]
 gi|262409637|ref|ZP_06086177.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           2_1_22]
 gi|294647118|ref|ZP_06724722.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294807895|ref|ZP_06766676.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229447041|gb|EEO52832.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D1]
 gi|262352490|gb|EEZ01590.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           2_1_22]
 gi|292637535|gb|EFF55949.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294444893|gb|EFG13579.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 378

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/342 (12%), Positives = 88/342 (25%), Gaps = 71/342 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+VSWNI  L +    SL  +           +  R       + +    +       
Sbjct: 43  PFRVVSWNIENLFDTRHDSLKNDHEFLPNAMRHWNYSRYKKKLVDVARVITAIGEWSPPA 102

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V L E+ +   +  +  ++          + N         I  A+  ++   ++L   
Sbjct: 103 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 159

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSP-SCSLLS 185
              +     +     R  + +  + + G  + V   HL S          Y   +  +L 
Sbjct: 160 SISIPPLKQY--RPTRDLLHVSGLLLTGDTLDVFVCHLPSRSGGAKESEPYRLYAAHILR 217

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227
            +   + +       SL   +I GDFN                                 
Sbjct: 218 MEVDSIMN-----IRSLPQVIIMGDFNDYPTNQSIQKILEAEAPPVTTNNLASTTGSTNF 272

Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268
                       +   K K     + K       +D+ ++                    
Sbjct: 273 STVAPSSLKLYHLLARKAKSKDFGSYKYRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 332

Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     ++   +  +           +SDH PI  D++
Sbjct: 333 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGVSDHLPIYADFE 374


>gi|148271905|ref|YP_001221466.1| hypothetical protein CMM_0726 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829835|emb|CAN00758.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 349

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 45/303 (14%)

Query: 14  VPCTASVAQKV--------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +         +         +++ NI             +   R       L ++ +   
Sbjct: 68  LAPAPPQEATIGSAEGDLVHVMTCNIRLARPTTEPGDPDHWADREPV----LARFLQLEQ 123

Query: 66  ADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
             ++ +QE  S    A+A+  P +    +               ++    +    +    
Sbjct: 124 PTVLGVQEALSAQLPAIARALPHHRMLGYGRDGGSGGEYSAIFYDERRLDVVAWDQF--- 180

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                P L    S+  +  R A         +G +   L+ HL               S 
Sbjct: 181 WLSDLPELIGSRSWGCSTTRIATWARFRDRRSGAEFVHLNTHLDH------------ESE 228

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
               + A  + + + +      P V+ GDFN         D   +     D+        
Sbjct: 229 LARVKSADLITERLQEVAS-GAPVVVTGDFNAPAEESAAYDILTRDAGLADTWTTAAHHA 287

Query: 242 DSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                      +       ID+ +                +    +     G+  SDH  
Sbjct: 288 TPGIGTFTAYGDPVPEGERIDWILAG---------SGVEVVDSAINPYTFEGRSPSDHAA 338

Query: 298 ISI 300
           +  
Sbjct: 339 VQA 341


>gi|270159123|ref|ZP_06187779.1| endonuclease/exonuclease/phosphatase family protein [Legionella
           longbeachae D-4968]
 gi|289166042|ref|YP_003456180.1| hypothetical protein LLO_2719 [Legionella longbeachae NSW150]
 gi|269987462|gb|EEZ93717.1| endonuclease/exonuclease/phosphatase family protein [Legionella
           longbeachae D-4968]
 gi|288859215|emb|CBJ13149.1| putative conserved hypothetical proteins [Legionella longbeachae
           NSW150]
          Length = 251

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 88/287 (30%), Gaps = 50/287 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + L+++NI+       +                +R    +L+ D VFLQE+   +   +
Sbjct: 7   SISLITYNIHKGFGVGAIRFL----------LPKMRDAITSLNPDFVFLQEVQGEHIKRQ 56

Query: 83  V------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                      +  I  +      ++K       H   A+  K      ++  L      
Sbjct: 57  KRINAWPASPQSEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYAFERFENINLTHI--- 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R  +R  +   ++++   I +L +HL  F              +  + Q   L   I 
Sbjct: 114 --RRASRGILHAQLKLDNVTIHLLCVHLGLFK-------------AERNVQCNTLMQRIK 158

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P ++AGDFN        +      ++  ++ +    +      +   +R  + 
Sbjct: 159 DVVPQDEPLLMAGDFNDW--RTIISKPLADYLNIEEAFVSIEGQH---ARSFPAIRPSLC 213

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ID         + +                   + LSDH P+   ++
Sbjct: 214 IDRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 249


>gi|194292124|ref|YP_002008031.1| endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG
           19424]
 gi|193226028|emb|CAQ71975.1| putative endonuclease/exonuclease/phosphatase [Cupriavidus
           taiwanensis LMG 19424]
          Length = 293

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/293 (11%), Positives = 69/293 (23%), Gaps = 59/293 (20%)

Query: 13  LVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
            + C  + A    ++ +VS+NI+     +                  +      LDADIV
Sbjct: 29  ALHCPPTRAAGLAQMTVVSYNIHRAVGTDR-----------RYRPQRIAAVLAELDADIV 77

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+ S ++                       +   +       A+  +          
Sbjct: 78  ALQEVESGSSNDHTLEFLAGETGMHVVSGFTRVRGTVD----YGNALLTRFAPEAVNQID 133

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQ 187
           L            R A++            +     S C                    Q
Sbjct: 134 LTVKGC-----EPRGAIDA-----------IVTCTASGCANPLRVIATHLGLRPGERRHQ 177

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            Q L +++       +P ++ GD N    +           +                  
Sbjct: 178 VQQLLNYVAT--APPLPTILLGDVNEWFLWGRPLRWLHAYFE-----------HTPHTAT 224

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +      +D   +   A           ++          +  SDH P+  
Sbjct: 225 FPSRLPVFALDRIWVSPRA----------HLVSVASHRSPLARVASDHLPLVA 267


>gi|190346925|gb|EDK39113.2| hypothetical protein PGUG_03211 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 290

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 83/310 (26%), Gaps = 37/310 (11%)

Query: 4   KYVLALVFFLVPCTASVAQKV--RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           K+++ L    +   ASV + +  R+  +NI T S    V   K   +R       ++ Y 
Sbjct: 7   KFLVFLFVTSLAWAASVQKPLTFRVYDFNIKTASGNL-VPGEKPWSERKAGVIDSIKNYT 65

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                 IV LQE             +         +             +  I  +    
Sbjct: 66  SQH-PTIVGLQEALRGQL------DDIMKGLGPEWKFFGVGGSGDTKGEYCPIIYKSNEW 118

Query: 122 RVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLE 174
            ++  +   L          +     R      +    +G+ I   + HL          
Sbjct: 119 ELVNGTTKWLSETPDKPSRGYGSKYERIVTFAELRHVSSGRTIHYFNTHLDP-------- 170

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI-DPNDS 233
                   +  +  + +  ++        P  + GDFN K           +        
Sbjct: 171 ----HDDHVRYESVRDIITYVN-HTRQGSPVFLGGDFNAKRTSAPYKYVATQMTPASIAP 225

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
             +    K+   N+     +   ID+     +              Y      S    +S
Sbjct: 226 DPKGVDNKEKSTNSGFQFNHPKTIDFIFFQDH------GSKVKVDSYEILSSTSGNVVIS 279

Query: 294 DHCPISIDYD 303
           DH P+  D+ 
Sbjct: 280 DHSPVIADFS 289


>gi|189237783|ref|XP_976374.2| PREDICTED: similar to 2-phosphodiesterase [Tribolium castaneum]
          Length = 556

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/329 (11%), Positives = 90/329 (27%), Gaps = 46/329 (13%)

Query: 14  VPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
              T       R VS+NI  N  ++ E  S              L+ +     ++DI  L
Sbjct: 233 FTTTQLADNCFRFVSYNILSNRYADNEQFSYCPPQFLAIDYRKQLVAKELSGYNSDIFCL 292

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+         +      +F +      + ++ +      A    K   + +     + 
Sbjct: 293 QEVD-----QFAYNYYYKNLFKNKNYHSFYYRKGNKIPEGLACFYNKTRFKRVDDHQIIY 347

Query: 132 GAKDSF---SRAGNRRAV--------------------ELLVEINGKKIWVLDIHLKSFC 168
             + S+        R  +                     L V  + + ++++  +   + 
Sbjct: 348 SQEYSYKKNHYKYLRPIIESNALLKDCFMKQLTSLQVTVLNVNNSNRNVFIIVANTHLYY 407

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
             D+         S+ +     L     +   + V  ++ GDFN               +
Sbjct: 408 HPDAELVRVLQ-ISMATTYLSLLHKQYNKD-GNTVRVILCGDFNSVPTSTVYEFLTKGNL 465

Query: 229 DPNDSLIRFPKEK-------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
             ++ +                     S    N     +  +DY  ++++  +      F
Sbjct: 466 SRDNKVFEKTVNNVNLRHDFQLQSACGSPTYTNYTDDFRGCLDYIFIEKDKMRVCNVVPF 525

Query: 276 -SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    +        SDH  + +D +
Sbjct: 526 PKNEDLEAFEGLPNEVYPSDHLALVVDLE 554


>gi|15924993|ref|NP_372527.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus Mu50]
 gi|156980320|ref|YP_001442579.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus Mu3]
 gi|14247776|dbj|BAB58165.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus Mu50]
 gi|156722455|dbj|BAF78872.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus Mu3]
          Length = 289

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 83/278 (29%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
           + N  +   +D      Y K  + D+V   E     A  K+         Y T       
Sbjct: 17  YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 74

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 75  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 133

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K + V+  H +S    DS     +    + ++Q + + D++ +          I GD N 
Sbjct: 134 KNVHVIGTHTQS---EDSRCGAGN-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 189

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D  K ++ ND L                  N        +DY   D++  +
Sbjct: 190 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 248

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 249 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 286


>gi|308175988|ref|YP_003915394.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117]
 gi|307743451|emb|CBT74423.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117]
          Length = 266

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 82/299 (27%), Gaps = 55/299 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N+L                 +    +  + +  D D++ +QE      N   
Sbjct: 1   MKIATWNVNSL----------------RARADRVEDWLRRTDVDVLAIQETKCKDDNFPW 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY----PLLGAKDSF 137
           ++F  N + + +               +    +A+  +      +      P  G     
Sbjct: 45  ELFENNDYEVAH------------FGVNQWNGVAIASRVGLENVERTFPGQPEFGKGGKN 92

Query: 138 SRAGNRRA--------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                R          +  L   NG+ +    +  K        + +          Q  
Sbjct: 93  PIQEPRAIAATCGGVRIWSLYVPNGRALDDEHMGYKLNWLDVLKKESAGWLEENPQAQIA 152

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            + DW    K   V  +     N   +        +   +            +       
Sbjct: 153 LMGDWNIAPKNEDVWDIDFFVENNLTHVSAPERAAFAAFEDLGFTDVVRPHTEGEYTYWD 212

Query: 250 NLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + +      + ID+ +        +I  S        D  + +GK  SDH P+ ++ 
Sbjct: 213 YTQLRFPKGEGMRIDFSLTSPALTARVIGASI-------DREERKGKGASDHAPVIVEL 264


>gi|291515600|emb|CBK64810.1| Endonuclease/Exonuclease/phosphatase family [Alistipes shahii WAL
           8301]
          Length = 816

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 85/312 (27%), Gaps = 46/312 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE------- 73
           +  +R++ WNI      +  +           +Y     + K  D DI    E       
Sbjct: 519 SDNLRVLYWNIQNGMWSDQAN-----------NYNNFVAWVKKYDPDICVWCESATIYKD 567

Query: 74  -MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              S  A +  F  + W    +       +     ++    I  +     +L+     + 
Sbjct: 568 NTNSAQASSARFLPDGWAALAARYGHAYTAVGGWRDNYPQTITSKYPIETLLK-----IT 622

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIH-------LKSFCFLDSLENTYSPSCSLLS 185
             D   +  +  A    V + G+ I ++ +H               +             
Sbjct: 623 DSDQAGKPVSHGAAIQRVTVKGRTINIVTLHTWPQAYGFGVGSADQAASAANKEGDKYRE 682

Query: 186 QQAQWLKD--WITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPNDSL 234
            + +++           S   +++ GDFN +                      I  + +L
Sbjct: 683 FEIKYICAQTVNNPAYASCQDWLMMGDFNSRSRADNWYYGYPENDTRLLVHNHILDHTNL 742

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---GKR 291
                E+      +    N   IDY     + Y  ++        +              
Sbjct: 743 KDIIAERYPGSFISSTYGN-ARIDYMYASPSMYARIVNALTVMDKWTTATQSPYVSNFYD 801

Query: 292 LSDHCPISIDYD 303
            SDH PI  D++
Sbjct: 802 PSDHRPILADFE 813


>gi|223674122|pdb|3G6S|A Chain A, Crystal Structure Of The
           EndonucleaseEXONUCLEASEPHOSPHATASE (BVU_0621) FROM
           Bacteroides Vulgatus. Northeast Structural Genomics
           Consortium Target Bvr56d
          Length = 267

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 66/288 (22%), Gaps = 38/288 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            VR  ++NI   + Q+ ++ W             + Q+ K+ + DIV  QE+        
Sbjct: 3   DVRWATFNIRYDNPQDSLNNW-------QYRKDRVCQFIKDHELDIVGXQEVLHNQFQDL 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +            +   +             +        P       +     
Sbjct: 56  RAGLPEYDGIGVGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGXXGWDAVCV 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A     +          ++     F    E     S  L+ ++ + +           
Sbjct: 116 RIATWAKFKDKATGKIFXAVNTH---FDHVGEEARRQSALLIIRKIKEIV--------GE 164

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-------KI 255
            P V+ GDFN                   D+     +                       
Sbjct: 165 RPAVVTGDFNVTDASDAYETITTNEFVXKDAYKTAARVTGVD---YTFHDFARIPAEDCE 221

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ID+  +         +                   LSDH P   D +
Sbjct: 222 KIDFIFVTPQVLVKSCEIPAEV----------PEALLSDHNPQLADLE 259


>gi|13473590|ref|NP_105158.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099]
 gi|14024340|dbj|BAB50944.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099]
          Length = 268

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 75/309 (24%), Gaps = 72/309 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
              + +WNIN                       ++ +       D++ LQE  +      
Sbjct: 2   PFSIATWNIN----------------SVRLRMPIVERLLDEYAPDVLCLQETKVPDELFP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K F +  +                     +  +A   +    + +       +DS    
Sbjct: 46  EKAFRRLGYQYIA-----------FHGQKGYHGVATVARRPIEVVEKRRFCDIEDSRH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                + + V   GK I + + ++ +    D  +   +            +   I  +  
Sbjct: 93  -----LSVTVRAGGKTILLHNFYVPAG--GDEPDPEINKKFKHKLDFVAEMNA-IRAEHT 144

Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSR 244
            +   V+ GD N     + + ++      +                 + +          
Sbjct: 145 EVSASVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETENFEAMRLAGNWVDLMRHNVPLD 204

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+     N  +           Y         +R SD
Sbjct: 205 QKLYTWWSYRAQDWELSNRGRRLDHVWSSPNLVQDFAG-------YEILRAARGWERPSD 257

Query: 295 HCPISIDYD 303
           H P+   +D
Sbjct: 258 HVPVIARFD 266


>gi|157160265|ref|YP_001457583.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli HS]
 gi|170020854|ref|YP_001725808.1| endonuclease/exonuclease/phosphatase [Escherichia coli ATCC 8739]
 gi|188495117|ref|ZP_03002387.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 53638]
 gi|194438459|ref|ZP_03070549.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 101-1]
 gi|253774207|ref|YP_003037038.1| endonuclease/exonuclease/phosphatase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160867|ref|YP_003043975.1| putative DNase [Escherichia coli B str. REL606]
 gi|300929408|ref|ZP_07144877.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 187-1]
 gi|312970864|ref|ZP_07785043.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 1827-70]
 gi|157065945|gb|ABV05200.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli HS]
 gi|169755782|gb|ACA78481.1| Endonuclease/exonuclease/phosphatase [Escherichia coli ATCC 8739]
 gi|188490316|gb|EDU65419.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 53638]
 gi|194422683|gb|EDX38680.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 101-1]
 gi|242376582|emb|CAQ31291.1| predicted DNase [Escherichia coli BL21(DE3)]
 gi|253325251|gb|ACT29853.1| Endonuclease/exonuclease/phosphatase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972768|gb|ACT38439.1| predicted DNase [Escherichia coli B str. REL606]
 gi|253976988|gb|ACT42658.1| predicted DNase [Escherichia coli BL21(DE3)]
 gi|300462608|gb|EFK26101.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 187-1]
 gi|310336625|gb|EFQ01792.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 1827-70]
 gi|323963037|gb|EGB58608.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H489]
 gi|332342122|gb|AEE55456.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 253

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASASAPTALPLQT-----------WRHLSDHAPLSAEI 251


>gi|303232423|ref|ZP_07319115.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4]
 gi|302481507|gb|EFL44575.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4]
          Length = 259

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 75/309 (24%), Gaps = 76/309 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S     RL SWN+N L                           ++L+ DI+ +QE     
Sbjct: 2   SQKHTYRLASWNVNGLRAVMKKDPNF-------------IDVVQSLNVDIIGIQETKLQE 48

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                     +   +S           +    ++  AV  K   +         A D+  
Sbjct: 49  G-QIALDLPGYTQTWS----------YAERKGYSGTAVFSKEAPLQTIHTIGCSAADNEG 97

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R         +  +     W ++++  +     +  +               L       
Sbjct: 98  R---------VCALEFNDFWFVNVYTPNSKNELARLDERMEWDEAYRSFLHTL------- 141

Query: 199 KESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243
            ++  P +  GDFN                           +  +        F     +
Sbjct: 142 -DAKKPVITCGDFNCAHEEIDLKNPATNHQNAGFSDEERASFTKLLNTGFTDTFRAAHPT 200

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             +A      +           IDYF++       +        +Y            SD
Sbjct: 201 LTDAYSWWSYRMRSRERNAGWRIDYFLVSDRIKNQVSDARIHADVY-----------GSD 249

Query: 295 HCPISIDYD 303
           HCP+ +   
Sbjct: 250 HCPVGLTIT 258


>gi|291617653|ref|YP_003520395.1| XthA [Pantoea ananatis LMG 20103]
 gi|291152683|gb|ADD77267.1| XthA [Pantoea ananatis LMG 20103]
 gi|327394080|dbj|BAK11502.1| exodeoxyribonuclease III XthA [Pantoea ananatis AJ13355]
          Length = 268

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 79/312 (25%), Gaps = 75/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFISFNINGL----------------RARPHQLEALVEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + ++        H  +A+  K   V  +        D+      R
Sbjct: 42  FP-------LEDVAKLGYNVFYHGQKGHYGVALLTKVQPVSVRRGFPGDDDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      I V++       F       +        +  + L+ +++    +  
Sbjct: 90  RLIMAEIPSPIGDITVIN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLSDSLAADK 144

Query: 204 PFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPKEK 241
           P +I GD N                               +   + +          +  
Sbjct: 145 PVLIMGDMNISSTDLDIGIGEDSRKRWLRTGKCSFLPEEREWMDRLLSWGLVDTWRAQNP 204

Query: 242 DSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +   +       +           ID  +         I+          D      ++ 
Sbjct: 205 EIN-DRFSWFDYRSKGFDDNRGLRIDLLLASTGLASHCIETGI-------DYEIRGMEKP 256

Query: 293 SDHCPISIDYDF 304
           SDH P+   + F
Sbjct: 257 SDHAPVWSTFHF 268


>gi|160936797|ref|ZP_02084163.1| hypothetical protein CLOBOL_01687 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440289|gb|EDP18035.1| hypothetical protein CLOBOL_01687 [Clostridium bolteae ATCC
           BAA-613]
          Length = 251

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 77/303 (25%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L    G                    + +  +AD+  +QE           
Sbjct: 3   KLISWNVNGLRACVGKGF---------------LDFFREAEADVFCIQESKLQEG-QIEL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++           +    ++  A+  K   V       +   D+  R     
Sbjct: 47  DLPGYHQYWN----------YARKKGYSGTAMFTKEEPVSVSYGIGMEEHDTEGR----- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++     + +V+  +  +     +  +             + L++          P
Sbjct: 92  ----VITAEFPEYYVVTCYTPNSQDGLARLDYRMKWEDDFLAYLKKLEE--------NKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            V  GD N                           +  +     +  F            
Sbjct: 140 VVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTDLLAAGFVDTFRYFYPDLEGTYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + ++    L+  S    +             SDHCP+ +
Sbjct: 200 WWSYRFSARAKNAGWRIDYFCVSESLKDRLVSASIHNTV-----------MGSDHCPVEL 248

Query: 301 DYD 303
             +
Sbjct: 249 VIE 251


>gi|187920658|ref|YP_001889690.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
 gi|187719096|gb|ACD20319.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
          Length = 270

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 83/303 (27%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN                   S    L Q+ +    DIV LQE+ + ++    
Sbjct: 4   LRIATFNING----------------IRSRLPALLQWLEREAPDIVCLQELKAVDSA--- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +            +A+  K    L+    L G +D      +R
Sbjct: 45  -------FPVEQLRDAGYGAIWQGQSAWNGVAILSKGEAPLESRRGLPGFEDDTH---SR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + V  ++L +       +  Y  +            +   +  +S  
Sbjct: 95  YIEAAV-----GGVLVACLYLPNGNPQPGPKFDYKLA------WFDHFIEHAAKLYKSAH 143

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+AGDFN         +                 + + +    +        D R   
Sbjct: 144 PVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYQRLLAQGWTDALRTHFGDERVYT 203

Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +   +         ID+ ++  +    L            D         SDH P  +
Sbjct: 204 FWDYFRRHWETNSGLRIDHLLLSADLAPRLRDAGV-------DRWVRGEPHASDHAPTWV 256

Query: 301 DYD 303
           + +
Sbjct: 257 ELE 259


>gi|62290851|ref|YP_222644.1| exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941]
 gi|82700763|ref|YP_415337.1| AP endonuclease [Brucella melitensis biovar Abortus 2308]
 gi|225853439|ref|YP_002733672.1| exodeoxyribonuclease III [Brucella melitensis ATCC 23457]
 gi|254690141|ref|ZP_05153395.1| Exodeoxyribonuclease III [Brucella abortus bv. 6 str. 870]
 gi|254694631|ref|ZP_05156459.1| Exodeoxyribonuclease III [Brucella abortus bv. 3 str. Tulya]
 gi|254696256|ref|ZP_05158084.1| Exodeoxyribonuclease III [Brucella abortus bv. 2 str. 86/8/59]
 gi|254707472|ref|ZP_05169300.1| Exodeoxyribonuclease III [Brucella pinnipedialis M163/99/10]
 gi|254731174|ref|ZP_05189752.1| Exodeoxyribonuclease III [Brucella abortus bv. 4 str. 292]
 gi|256045604|ref|ZP_05448484.1| Exodeoxyribonuclease III [Brucella melitensis bv. 1 str. Rev.1]
 gi|256112331|ref|ZP_05453252.1| Exodeoxyribonuclease III [Brucella melitensis bv. 3 str. Ether]
 gi|256258395|ref|ZP_05463931.1| Exodeoxyribonuclease III [Brucella abortus bv. 9 str. C68]
 gi|256263081|ref|ZP_05465613.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9]
 gi|260546115|ref|ZP_05821855.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038]
 gi|260562912|ref|ZP_05833398.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
 gi|260755677|ref|ZP_05868025.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870]
 gi|260758902|ref|ZP_05871250.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292]
 gi|260760626|ref|ZP_05872969.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884704|ref|ZP_05896318.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68]
 gi|261214952|ref|ZP_05929233.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya]
 gi|261314960|ref|ZP_05954157.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10]
 gi|265992027|ref|ZP_06104584.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993764|ref|ZP_06106321.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether]
 gi|62196983|gb|AAX75283.1| Xth-2, exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941]
 gi|82616864|emb|CAJ11960.1| AP endonuclease, family 1:Exodeoxyribonuclease III
           xth:Endonuclease/exonuclease/phosphatase family
           [Brucella melitensis biovar Abortus 2308]
 gi|225641804|gb|ACO01718.1| exodeoxyribonuclease III [Brucella melitensis ATCC 23457]
 gi|260096222|gb|EEW80098.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038]
 gi|260152928|gb|EEW88020.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
 gi|260669220|gb|EEX56160.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292]
 gi|260671058|gb|EEX57879.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675785|gb|EEX62606.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870]
 gi|260874232|gb|EEX81301.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68]
 gi|260916559|gb|EEX83420.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya]
 gi|261303986|gb|EEY07483.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10]
 gi|262764745|gb|EEZ10666.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether]
 gi|263003093|gb|EEZ15386.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092973|gb|EEZ17134.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9]
 gi|326410001|gb|ADZ67066.1| Exodeoxyribonuclease III [Brucella melitensis M28]
 gi|326539718|gb|ADZ87933.1| exodeoxyribonuclease III [Brucella melitensis M5-90]
          Length = 268

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 78/306 (25%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       L+ Q+ ++   D++ LQE         +
Sbjct: 3   FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                S    +  +A   +      +        D        
Sbjct: 44  FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+   
Sbjct: 93  --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N     N + ++    K +                            +    
Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                         R SDH P
Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLES-------HNKGLQVLRDARGWDRPSDHVP 260

Query: 298 ISIDYD 303
           +   +D
Sbjct: 261 VIATFD 266


>gi|317506931|ref|ZP_07964703.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974]
 gi|316254859|gb|EFV14157.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974]
          Length = 267

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 73/305 (23%), Gaps = 66/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   +       + +    D++ LQE    +A    
Sbjct: 1   MRIATWNIN----------------SIRARVDRAVSWLERSQVDVLALQETKCADA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   ++   + N     +A+  +      Q                 
Sbjct: 41  ------QFPEEPFREAGYAVAHTGNGQWNGVAIVSRLGLADVQVGFDGQPGFHKDPEAEA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 +      + +  +++ +     D          + L  QA+    W+    ++ 
Sbjct: 95  LPEPRAIAATCGGVRIWSLYVPNGRDLADRHYGYKLEWLAALRGQAE---GWLA--ADAD 149

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               + GD+N                         D F+             +       
Sbjct: 150 AKIALTGDWNIAPFDEDVWDPSFFDGKTHTSGPERDAFFAF--EKSGFTDVARPHTPGPG 207

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +        +   S        D  + +GK  SDH P
Sbjct: 208 VYTYWDYTQLRFPRREGMRIDFVLGSPALAASVTGASV-------DREERKGKGASDHAP 260

Query: 298 ISIDY 302
           + ++ 
Sbjct: 261 VVVEL 265


>gi|218699162|ref|YP_002406791.1| putative metal-dependent hydrolase [Escherichia coli IAI39]
 gi|218369148|emb|CAR16903.1| putative metal-dependent hydrolase [Escherichia coli IAI39]
          Length = 253

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 84/288 (29%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +      ++  +      
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIENYENRDVSVDG-- 116

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 117 ---AEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNAS-----------TSAPTALPLRTWRHLSDHAPLSAEI 251


>gi|254825627|ref|ZP_05230628.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           J1-194]
 gi|254853407|ref|ZP_05242755.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           R2-503]
 gi|254992839|ref|ZP_05275029.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL J2-064]
 gi|255519856|ref|ZP_05387093.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL J1-175]
 gi|300764548|ref|ZP_07074540.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL N1-017]
 gi|258606777|gb|EEW19385.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           R2-503]
 gi|293594872|gb|EFG02633.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           J1-194]
 gi|300514655|gb|EFK41710.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL N1-017]
          Length = 256

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 76/285 (26%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E         +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMCD-M 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++      +         P + +  S +    R
Sbjct: 54  KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPEVPSIHSTAM-FPR 112

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     + +GK++++ + HL                       A  L           
Sbjct: 113 ICVWGKFADSDGKQVYIFNTHLDHIS-------------EEARLFASQLLLKKAAIIAEN 159

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---IPIDY 259
            P ++ GDFN + N    N    K  D      +  K      +    LR +     IDY
Sbjct: 160 SPVIVLGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPTGSFHDFHPLRPQNELEKIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +            F    Y     +  G   SDH P++ + D+
Sbjct: 220 IFVSNE---------FKVNTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|52840714|ref|YP_094513.1| endonuclease/exonuclease/phosphatase family protein [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52627825|gb|AAU26566.1| endonuclease/exonuclease/phosphatase family protein [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 257

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 89/294 (30%), Gaps = 50/294 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                 + V L+++NI+       V                +R     L+ D VFLQE+ 
Sbjct: 6   SMQPEVRSVSLITYNIHKGFGVGAVRFL----------LPEMRDAIAGLNPDFVFLQEVQ 55

Query: 76  --SYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                   ++           I  +      ++K       H   A+  K      +S  
Sbjct: 56  GKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESIN 115

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L           +R  +   ++++   I +L +HL  F              +  ++Q +
Sbjct: 116 LSN-----MNRASRGILHTQLKLDNNIIHLLCVHLGLFK-------------AERTEQCK 157

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L   I        P ++AGDFN   +    +    + +   ++ +    +      +  
Sbjct: 158 ALIQRIKDVVPKNEPLIMAGDFNDWRHV--ISKILAENLGIEEAFVALEGQH---ARSFP 212

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++  + +D         + +                   + LSDH P+   ++
Sbjct: 213 AIKPALCVDRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 255


>gi|60280047|gb|AAX16387.1| unknown [uncultured murine large bowel bacterium BAC 31B]
          Length = 335

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/341 (11%), Positives = 91/341 (26%), Gaps = 57/341 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46
           M +  VL   +  V    +   +     +  +N+  L +    +   +           +
Sbjct: 1   MRKILVLCSFWLCVATLGAQNAERNLYSVAFYNLENLFDTVHDAGKNDNEFLPDGSYRWT 60

Query: 47  VKRTTSDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
           VK+  S    L +   +L  D+       + + E+ +   +  +  +     +       
Sbjct: 61  VKKYESKLQNLSKVLGSLSRDLVPEGPAFIGVAEVENSRVLEDLVKQPAISNYEFVHYEG 120

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                     I  A+    K   V      L    +  +    R  + +  ++ G+++ V
Sbjct: 121 P-----DRRGIDCALLYDPKQFSVTHSKLVLSTPFEGDTVHLTRGFLIVDGQLAGERVCV 175

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S           SP     ++Q + LKD + +  +  +  ++ GD N       
Sbjct: 176 IVNHWPSR-------GAKSPVRVHAARQVKALKDSLMR-SDKKLKLIVMGDMNDDPMDES 227

Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                      +          +   +D               D  V+ +   K      
Sbjct: 228 MEVLGARKYPKQVKKGEFYNPWWVTLEDKGVGTLLYRGKWNLFDQIVISKPLLKAKKGLR 287

Query: 275 FSEI------------------LYNEDDIKSRGKRLSDHCP 297
           ++                            +     SDH P
Sbjct: 288 YTHNEVFIRDYLIQQDGKYKGAPLRTHGGGAWLNGYSDHLP 328


>gi|317503938|ref|ZP_07961946.1| exodeoxyribonuclease III [Prevotella salivae DSM 15606]
 gi|315664964|gb|EFV04623.1| exodeoxyribonuclease III [Prevotella salivae DSM 15606]
          Length = 250

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G                   Q  ++L+AD   LQE     A    
Sbjct: 1   MKFISWNVNGLRACVGKDF---------------SQSFESLNADFFCLQETK-MQAGQLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  +   +       +   D   R    
Sbjct: 45  LQFPGYTSYWNYAEKKGY----------SGTAIYTRKEPLAVSYGIGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   K +++ ++  +                         + ++ Q  ++  
Sbjct: 91  -----VITLEYDKFFLVTVYTPN-------AQEELRRLDYRMTWEDAFQAYLHQ-LDAKK 137

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                             + +    +        +    +
Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRRSAGFTDEERSKMTQLLSNGFTDTFRTLHPEQITYS 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R +         IDYF++       L   S    +Y            SDHCP+ +
Sbjct: 198 YWSYRFRAREKNAGWRIDYFLISDRLRPQLKGASIHTEIY-----------GSDHCPVEL 246

Query: 301 DYD 303
           D D
Sbjct: 247 DID 249


>gi|285817689|gb|ADC38176.1| truncated beta-hemolysin [Staphylococcus aureus 04-02981]
          Length = 289

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 82/278 (29%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
           + N  +   +D      Y K  + D+V   E     A  K+         Y T       
Sbjct: 17  YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 74

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 75  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 133

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K I V+  H +S    DS          + ++Q + + D++ +          I GD N 
Sbjct: 134 KNIHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 189

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D  K ++ ND L                  N        +DY   D++  +
Sbjct: 190 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 248

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 249 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 286


>gi|213156292|ref|YP_002318712.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii
           AB0057]
 gi|213055452|gb|ACJ40354.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii
           AB0057]
          Length = 783

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 99/325 (30%), Gaps = 50/325 (15%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K++DAD+  L E+ + 
Sbjct: 432 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIANN 491

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +         + +      R  N+ I  AI    K V+ L ++  L     
Sbjct: 492 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKPLNKAVVLDLGD- 550

Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL-------DSLENTYSP-SCSLLS 185
                 NR  +    +     K   V+  HLKS           D+ +N           
Sbjct: 551 -----KNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWNPTRV 605

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  W+ +          ++ GD N            ++  +    L      + +
Sbjct: 606 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 663

Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
           +  +                 +D+ + D + Y  +++     I  +E  +          
Sbjct: 664 QAYSYVFGVASDANGNGGVGNLDHAIADADLYPKVVRTFAWHINADEPMVLDYNEEYKTD 723

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +D D
Sbjct: 724 EQKALFYGEDAYRSSDHDPVIVDLD 748


>gi|161619921|ref|YP_001593808.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365]
 gi|254705010|ref|ZP_05166838.1| exodeoxyribonuclease III [Brucella suis bv. 3 str. 686]
 gi|260567518|ref|ZP_05837988.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40]
 gi|261755709|ref|ZP_05999418.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686]
 gi|161336732|gb|ABX63037.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365]
 gi|260157036|gb|EEW92116.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40]
 gi|261745462|gb|EEY33388.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686]
          Length = 268

 Score = 86.9 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       L+ Q+ ++   D++ LQE         +
Sbjct: 3   FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                S    +  +A   +      +        D        
Sbjct: 44  FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+   
Sbjct: 93  --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N     N + ++    K +                            +    
Sbjct: 148 SSLLIGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    +                    R SDH P
Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDHVP 260

Query: 298 ISIDYD 303
           +   +D
Sbjct: 261 VIATFD 266


>gi|299145012|ref|ZP_07038080.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
 gi|298515503|gb|EFI39384.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
          Length = 277

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 70/280 (25%), Gaps = 43/280 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+++S+NI                         + Q  K ++ D+  LQE  +     + 
Sbjct: 38  VKVMSYNI----------YSGQKAYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVEK 87

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +        K    +       +  K     + +Y L   + +      R
Sbjct: 88  ADIIALMKEVTGMPYAFFVKTRDVDGGEYGNLILSKYPISDEVNYDLPRIE-TVEDVYPR 146

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  E +GK  +    HL       +              Q   +   I + K    
Sbjct: 147 SMGVVKTEKDGKGFYFGVTHLSHVGNETN-----------RINQTTTI---IEKTKGLDK 192

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GDFN   +         K +     +                      ID+ +  
Sbjct: 193 PMILTGDFNALADSGP-----MKILYERFEIGCLNGNYGLTTGT---PVPVKAIDFVLYT 244

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              Y E          SDH P+   + 
Sbjct: 245 PDDGMSPKAYDVYYDAYVE----------SDHFPVVATFS 274


>gi|108797547|ref|YP_637744.1| exodeoxyribonuclease III [Mycobacterium sp. MCS]
 gi|119866633|ref|YP_936585.1| exodeoxyribonuclease III [Mycobacterium sp. KMS]
 gi|108767966|gb|ABG06688.1| Exodeoxyribonuclease III [Mycobacterium sp. MCS]
 gi|119692722|gb|ABL89795.1| Exodeoxyribonuclease III [Mycobacterium sp. KMS]
          Length = 267

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/304 (9%), Positives = 68/304 (22%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  + +  D D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRARVDRVTDWLERADVDVLAMQETKCNDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       +    +A+  +                        
Sbjct: 41  ------QFPTMPFAALGYDVVHCGFNQWNGVAIASRVGLDDVAVGFDGQPTWGDKPDIEA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    +      + V  +++ +  F+ S    Y        +    L+           
Sbjct: 95  AAEARALGATCAGVRVWSLYVPNGRFVGSPHYAYK------LEWLAALRKTAHGWLTENP 148

Query: 204 --PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P  + GD+N                           +  I                  
Sbjct: 149 ALPIAMVGDWNIAPTDDDVWSVEAYQDSTHVTPPERQAFTEIVDAGYADVVRPFTPGPGV 208

Query: 247 ANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +        + ID+ +        +               + +GK  SDH P+
Sbjct: 209 YTYWDYTRLAFQKRRGMRIDFILGSPAFADRVTHAEIV-------REERKGKGASDHAPV 261

Query: 299 SIDY 302
            +D 
Sbjct: 262 LVDL 265


>gi|239931999|ref|ZP_04688952.1| large secreted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291440368|ref|ZP_06579758.1| large secreted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291343263|gb|EFE70219.1| large secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 609

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/327 (11%), Positives = 84/327 (25%), Gaps = 66/327 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A ++ + ++N+  L   +             +    +  + ++   DIV L+E+   N  
Sbjct: 302 AGELSVATYNVENLDPSDDTFA---------AHAAAIVDHLRS--PDIVALEEVQDDNGA 350

Query: 79  ----------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                              +      +    S + +      +   +I        + V 
Sbjct: 351 VDDATVTAGVTVTRLIDAVEAAGGPRYDW-RSVDPVDKADGGEPGGNIRQVFLFDPERVS 409

Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
              ++                      P      S +   +R+ +       G+ + V+ 
Sbjct: 410 FTDRAGGDATTAVGVTKVRGKAALTVSPGRVDPASAAFENSRKPLAGEFVFRGRTVIVIA 469

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKI 215
            H  S     SL + Y P    S +    QA+ + D+  +          V  GD N   
Sbjct: 470 NHFASKGGDQSLTSQYQPPSRGSETQRHLQAKAVHDFTAKILTTQKNAAVVALGDINDFE 529

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                                          +     N   +D  ++  +  +       
Sbjct: 530 FSRTTEI----LEGDGTLWSAIKSLPPGERYSYVYQGNSQVLDQILISPSIRRGGTFS-- 583

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                +         ++SDH P  + +
Sbjct: 584 ---YDSVHLNAEFHDQISDHDPQVLRF 607


>gi|152982053|ref|YP_001352165.1| hypothetical protein mma_0475 [Janthinobacterium sp. Marseille]
 gi|151282130|gb|ABR90540.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 328

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 95/317 (29%), Gaps = 39/317 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSV---KRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           Q++R  ++N+  L+               +   +  + + Q    LDAD++ LQE+ S  
Sbjct: 3   QELRFATFNVCNLALPGTKYYEDQIPYSAEEYDAKISWIAQQLDRLDADVIGLQEIFSQQ 62

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL---------QQSYP 129
           A+  V  K          + + +    + + +  ++A+  +   +               
Sbjct: 63  ALTDVLAKTQKYR---DAQQLGYDPDPAADHLTPSVALISRLPVLAGATVFRELPHHLSI 119

Query: 130 LLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFL----------DSLENTYS 178
            L           R  +   ++  NG  + V   HLKS              D       
Sbjct: 120 TLPGVAHPVTHFTRPILHAQIQAANGLAVDVFVCHLKSKLPDYRNDLEDELPDQTGIAML 179

Query: 179 PSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLG----------NNDDFWKT 227
            S       A  L+  ++  K+    P V+ GDFN   + +             +     
Sbjct: 180 RSLIRRGTDALGLRHLLSDIKQLQRKPIVVMGDFNDVADAIPTQMVMGLGKYPLNGVDDR 239

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL--YNEDDI 285
           +  +  +             + +  +   ID+ ++ +             I   Y  D +
Sbjct: 240 LFESYRIQSRRDVLRDVGYTHIHDNSYETIDHILVSEEFNPGSPGALGEVIEVMYLNDHM 299

Query: 286 KSRGKRLSDHCPISIDY 302
             R    SDH  +    
Sbjct: 300 TFRQAYASDHGLVLARI 316


>gi|148271891|ref|YP_001221452.1| hypothetical protein CMM_0712 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829821|emb|CAN00742.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 276

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 93/300 (31%), Gaps = 37/300 (12%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           +V        +    + L+S N+             +  +R       L ++ +     +
Sbjct: 1   MVVMTPAIGPTTGDDIHLISLNVRMPWHGTREGEADHWPERQEV----LTRFLQQERPTV 56

Query: 69  VFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           + +QE        + K  P  ++ +        +H +  +     + + + + +V  L  
Sbjct: 57  LGVQEALWPQIQTIEKALP-PSYRMIGQGREGGSHGEHGAIFYQASRLTLLEHDVMWL-S 114

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             P +    ++     R       +    G  + VLD HL             + +  + 
Sbjct: 115 DTPDVIGSMTWGNPMPRILTWARFQDEATGHPLVVLDTHLDHDVAEARDRAAEAIAELVR 174

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           ++ A              +P V+ GDFN  ++     D   +     DS +   ++    
Sbjct: 175 TRFA-------------GLPLVLIGDFNAPVDS-FPYDALTRRAGLRDSWLDTARQATPA 220

Query: 245 CNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                + R  +     ID+ ++                    +D   RG+ +SDH P+  
Sbjct: 221 FGTFPDYRPPVVDGPRIDWILVSDR---------VDVRAAAVNDFAWRGRMMSDHLPVQA 271


>gi|159037690|ref|YP_001536943.1| sphingomyelin phosphodiesterase [Salinispora arenicola CNS-205]
 gi|157916525|gb|ABV97952.1| Sphingomyelin phosphodiesterase [Salinispora arenicola CNS-205]
          Length = 318

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 101/318 (31%), Gaps = 36/318 (11%)

Query: 6   VLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           VLA    +    A+ A    +++++ N+  L      SL+ N  + T SD      Y   
Sbjct: 12  VLAATGLVASTGAAQAAPAPLKVLTHNVMLLP----QSLYPNWGQVTRSDLISEADYITG 67

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIA 115
              DIV LQEM    A  ++  +      Y T  L                       + 
Sbjct: 68  R--DIVVLQEMFDNEASNRLKDRLAAQYPYQTPVLGRSRSGWDATMGAYSNVTPEDGGVT 125

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  K   + +  Y       +   + N+  V   +++NG  + V+  H ++    D+   
Sbjct: 126 ILSKWPILEKIQYVYADGCGADWFS-NKGFVYARLDVNGAPLHVVGTHAQA---ADTGCA 181

Query: 176 TYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             + +  + + Q   L+ ++  +   +    +I GD N             +    + S 
Sbjct: 182 DGTGAG-VRAAQFDELRAFLDARLIPTGEQVIITGDLNVDRYSAEYAGMLTRLDVSDTSF 240

Query: 235 IRFPKEKDSRCN----ANKNLRNKIPIDYFV--------MDQNAYKFLIQESFSEILYNE 282
              P   DS  N     N +  ++  +DY +           +     +      +    
Sbjct: 241 TGHPYSWDSARNAMADYNDDRNSRQQLDYVMQRNGHARHGSGDNQTLAVNAPKWCVTSWF 300

Query: 283 DDIKSRGKRLSDHCPISI 300
                      DH P++ 
Sbjct: 301 VRYCYTDYA--DHYPVAA 316


>gi|169624612|ref|XP_001805711.1| hypothetical protein SNOG_15565 [Phaeosphaeria nodorum SN15]
 gi|111055820|gb|EAT76940.1| hypothetical protein SNOG_15565 [Phaeosphaeria nodorum SN15]
          Length = 438

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 98/316 (31%), Gaps = 37/316 (11%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M    +L+L F  +    +  +    +++N+  L      +         T+    + + 
Sbjct: 1   MRASLLLSLPFVGIALAQTSGK-FTTITFNVAGLPPVLNGNEIPGDKTTNTA---RIGEL 56

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               +  +V +QE  +++A      K+ +    S            +N  +TA       
Sbjct: 57  LTQYNISLVHVQEDFNFHATLYANDKHPYRTPTSGGVPFGSGLNSLSNFPYTAF------ 110

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179
               +  +      DS      +    + +++  G      ++H  +           + 
Sbjct: 111 ---ERVKWGTCSTFDSADCLTPKGFTFMRLQVAPGVSFDAYNLHADAGT--------TAA 159

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------DDFWKTI 228
                +   + + D+I          V+ GD N +     ++            D W  +
Sbjct: 160 DLKARAANLRQVSDYIKAN-SQGNAVVVFGDTNTRYTRGPDDIPGIFAQENGMKDVWVEL 218

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
             N  +      +   C+          +D      ++   +   SF      +  +++ 
Sbjct: 219 AKNG-VPPAGGAEALLCDNPSKSTACETVDKVFYRGSSAVTIQANSFD--YAGDMFLQAD 275

Query: 289 GKRLSDHCPISIDYDF 304
           G  LSDH P+ +++ +
Sbjct: 276 GSILSDHNPVLVEFAW 291


>gi|240168902|ref|ZP_04747561.1| putative exodeoxyribonuclease III protein [Mycobacterium kansasii
           ATCC 12478]
          Length = 276

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 68/306 (22%), Gaps = 66/306 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +RL +WN+N                   +    +  +    D D++ +QE    +   
Sbjct: 4   GTLRLATWNVN----------------SIRTRLDRVLDWIARADVDVLAMQETKCADG-- 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                            + +       D    +A+  +      Q         S     
Sbjct: 46  --------QFPALPLFELGYEVAHVGFDQWNGVAIASRVGIDDVQVGFDGQPTWSRKPEV 97

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A    +      + V  +++ +   L     TY             LKD        
Sbjct: 98  AATAEARALGATCGGVRVWSLYVPNGRALGDPHYTYKLD------WLAALKDTAEGWLRD 151

Query: 202 L--VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSR 244
                  +AGD+N                           +  I                
Sbjct: 152 DPAAAIALAGDWNIAPTDDDVWSTEFYAGATHVSEPERKAFNAIVDAQFADLVRPFAPGP 211

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                ID+ +      + ++              + +GK  SDH
Sbjct: 212 -GVYTYWDYTQLRFPKRQGMRIDFILGSPALARRVVDAQIV-------REERKGKAPSDH 263

Query: 296 CPISID 301
            P+ +D
Sbjct: 264 APVFVD 269


>gi|254831846|ref|ZP_05236501.1| hypothetical protein Lmon1_10855 [Listeria monocytogenes 10403S]
          Length = 256

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 78/285 (27%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +   
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMLDMK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + W  F             +    ++      +         P + +  S +    R
Sbjct: 55  AMLD-WDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     +++GK+ ++ + HL                       A  L           
Sbjct: 113 ICVWGKFADLDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAEN 159

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259
            P +I GDFN + +    N    K  D      +  K      +  + LR       IDY
Sbjct: 160 SPVIILGDFNTEPDTPTYNFITKKYQDAQLISQKRAKGPIGSFHDFRPLRPINELEKIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             + +          F    Y     +  G   SDH P++ + D+
Sbjct: 220 IFVSKE---------FQVCTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|71418503|ref|XP_810873.1| RNA-editing complex protein MP100 [Trypanosoma cruzi strain CL
           Brener]
 gi|70875471|gb|EAN89022.1| RNA-editing complex protein MP100, putative [Trypanosoma cruzi]
          Length = 922

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 82/293 (27%), Gaps = 34/293 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            ++L++WN+         +          +   Y +L +  +  DAD+V +QE+      
Sbjct: 647 TLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVLARVIQQEDADVVGMQEVE----- 701

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +  F S +  +  +   S      +I+     + V ++ +P+         A
Sbjct: 702 ------PVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPA 755

Query: 141 GNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                     + +++    + V   HL +           S   +L     + L      
Sbjct: 756 WTNHVSLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTL------ 809

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-LIRFPKEKDSRCNANKNLR---- 252
                   V  GDFN             + +D           +     N    L+    
Sbjct: 810 ----TGDVVTMGDFNDWPTNEFLMPAESQYVDCWPLIYPHDAGKTMDETNTFCKLKVEEM 865

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPISIDY 302
                D   +       +          N+++           SDH  +S+ +
Sbjct: 866 FFGRSDKLFLRSRRLAPVEGHLVGTKSVNDENGNKDAPGYLFPSDHYGVSMTF 918


>gi|171910959|ref|ZP_02926429.1| hypothetical protein VspiD_07285 [Verrucomicrobium spinosum DSM
           4136]
          Length = 300

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 84/287 (29%), Gaps = 50/287 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+V+WN+  L                +     + +    L  DIV  QE       A+
Sbjct: 53  KLRVVTWNVWGL---------HWITPLRSERLRKVAEEVARLKPDIVGFQEAFVEADRAE 103

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-----F 137
           +                 HS+   +  + + + +  +   + +                 
Sbjct: 104 LTQALQVVGLE-------HSRYFHSGLVGSGLLMVSRYPVLAEGFIRYASNGRPEALQHG 156

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                +      +++  G+++   + HL +           +   +    Q   L  W+ 
Sbjct: 157 DWWAGKGLSLCTLDLGEGRRLSFGNTHLHAR-------YKENRYHATQLAQTAQLIPWVK 209

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           + +E+  P +  GD+N   +     D     ++     +    +                
Sbjct: 210 KVRETGAPALWTGDWNNTPD----GDVLSPLMEAGAWKLLSTDQP--------------R 251

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D+       +++ + +        E D        SDH  + +D +
Sbjct: 252 VDHVFGSGEGWEWQVVDQGKVNGKLESDPTVPW---SDHAAVWVDVE 295


>gi|323976824|gb|EGB71912.1| endonuclease/Exonuclease/phosphatase [Escherichia coli TW10509]
          Length = 253

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 IDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPILVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|311746546|ref|ZP_07720331.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
 gi|311302536|gb|EAZ79778.2| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
          Length = 348

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 82/312 (26%), Gaps = 50/312 (16%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           Y  AL+ F        A+ ++++++N +    +       +           +  + ++ 
Sbjct: 69  YKFALITFQWHDKNENAKGLKVLTYNAHNFFYKSNNEGKFDP---------NVYTWLQDH 119

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            ADI   QE    +                           +       +A+  K   + 
Sbjct: 120 PADIKVFQEFY-QDFTTTSRNSIKLLGEDMGFESSYQVIEGNPQKRSLGLAIFSKYSIIQ 178

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +           F + G   A+   + +N   I + + HL+S   +DS            
Sbjct: 179 EGKV--------FDKNGTNGAIFADILVNQDTIRIYNAHLES-MRIDSEGLENIEGVKEN 229

Query: 185 SQQA------------QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            +Q             + L   +   + S  P ++ GD N                   +
Sbjct: 230 YRQTLGKLHRGSLERSKQLSLLVEHIQNSPHPIILMGDLNEVPYSYTYFKL------SEN 283

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               F             +   + ID+                  I +            
Sbjct: 284 LENAFELMGRGFGFTYNRILIFLRIDHIFASPQLKP---------IQFKTHREVDY---- 330

Query: 293 SDHCPISIDYDF 304
           SDH P+S  + +
Sbjct: 331 SDHYPVSATFTW 342


>gi|311032597|ref|ZP_07710687.1| hypothetical protein Bm3-1_19034 [Bacillus sp. m3-13]
          Length = 294

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/285 (10%), Positives = 72/285 (25%), Gaps = 35/285 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79
               ++S+N+  +   +  S               +         D++  QE  +     
Sbjct: 3   HTYTVMSFNLRVIVASDPFS--------WDDRKHWIADTINTYTPDVIGTQEATIPMLEW 54

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + + F + ++ ++             S   +  +  +       +    P +     +  
Sbjct: 55  LKETFEE-SYEVYAVNRTESTEVGEFSAVFVKKSRFIIGSKGSFMLAETPDIIGTMGWDA 113

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R    + +    +   VL             +        L+    +       +  
Sbjct: 114 HCERICSWVELIPKRQTEPVLRFFNTHL--DHMGKLARKEGLKLICDVIR------RKDN 165

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCNANKNLRNKIP 256
           E  +P ++ GDFN         +   +          F +E+       +A +      P
Sbjct: 166 EQSLPVILTGDFNDAPES----EALAEVSSMKSCYSCFTEEEKENSLTFHAYEGGTKGSP 221

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           IDY                  +          G   SDH P+   
Sbjct: 222 IDYIFGSN---------GVEFLTARILRDSFNGGYPSDHYPVLAT 257


>gi|121602111|ref|YP_988433.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
 gi|120614288|gb|ABM44889.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
          Length = 271

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 85/307 (27%), Gaps = 68/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ +WNIN                     +  + +Y +    DI+ LQE      +  +
Sbjct: 3   FRIATWNIN----------------SIRFRFEQVLRYLELCAPDILCLQE---TKCLDNL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +                +    +  +A+  +   V  +       K  F +    
Sbjct: 44  FPREVFLSAGYKH------IALNGQKAYHGVAILSRLPFVSVE-------KRFFCQKEEC 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R + ++V+   + I + + ++ +    D  +   +          + +   I   +   +
Sbjct: 91  RYLSVVVKPYQQAIRIHNFYVPAG--GDEPDVQVNEKFRHKLDFLEEMSS-IRADQGDGL 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N     + + ++      +                   +     +       
Sbjct: 148 SSLLMGDLNIAPLEDDVWSHKQLLNVVSHTPIETERLKALCHEGGWVDLMRMKFPVPIKL 207

Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +   F+   S                + SDH P
Sbjct: 208 YTWWSYRARDWALADRGRRLDHIWSSPDLAPFVEDLSI-------FREARGWSKPSDHVP 260

Query: 298 ISIDYDF 304
           +   ++F
Sbjct: 261 VQSVFNF 267


>gi|330987661|gb|EGH85764.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 380

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 95/325 (29%), Gaps = 68/325 (20%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+                  + + +    +     +  ++   DIV 
Sbjct: 69  GQALKVMTWNIQFLAGKRYVFWCDMADGSGPDERPTHEDLAYNLDEAARVIRDEQPDIVL 128

Query: 71  LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LQ +                   VA ++P +T   ++ +E + N     S      A   
Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGS-VGRKLATLS 187

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174
           R       +   P+  A     +   + A+ +      +G K+ V++  L +        
Sbjct: 188 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLTTARHTGD-- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228
                      +Q    +  + + +    P++I GDFN             + +      
Sbjct: 246 --------TAQKQVAATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAADS 297

Query: 229 ---DPNDSLIRFPKEKDS----RCNANKNLRNKIPI-------DYFVMDQNAYKFLIQES 274
              +  +     P   +S    R     +  N   I       DY     +  +     S
Sbjct: 298 ELHELWEKYPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLKR----VS 353

Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299
                 +          +SDH P+ 
Sbjct: 354 ARVRRDDTLL-------ISDHLPVI 371


>gi|328956310|ref|YP_004373643.1| exodeoxyribonuclease III Xth [Coriobacterium glomerans PW2]
 gi|328456634|gb|AEB07828.1| exodeoxyribonuclease III Xth [Coriobacterium glomerans PW2]
          Length = 283

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 81/302 (26%), Gaps = 64/302 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R  SWN+N L            + +   D++ +     +L+ADI+ +QE           
Sbjct: 20  RFASWNVNGLRA----------LMKKEPDFSEIA---ASLNADILAIQETKLQEG-QIDL 65

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +   +S      +S     +                 ++  +L   +         
Sbjct: 66  DLAGYHQTWSYAARKGYSGTAVFSREQ---------PIRTLRADAMLDVVEGGELLEPAI 116

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               +  +  ++ W  D++  +     +                + L+           P
Sbjct: 117 REGRVCALEFERFWFADVYTPNSQDGLARLPVRLAWDEAYRAFLKQLERM------GDKP 170

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            V  GDFN   N                       +  +        F        +A  
Sbjct: 171 VVTCGDFNVAHNEIDLRNPKSNRGNAGFSDEERASFSRLLEAGFTDTFRYLYPDVRDAYS 230

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++  +    +++ +  + ++            SDHCP+ +
Sbjct: 231 WWSYRFHARRTNAGWRIDYFLVSDSVRDRIVEATIRQDVF-----------GSDHCPVEL 279

Query: 301 DY 302
             
Sbjct: 280 VI 281


>gi|256370404|ref|YP_003107915.1| exodeoxyribonuclease III [Brucella microti CCM 4915]
 gi|256000567|gb|ACU48966.1| exodeoxyribonuclease III [Brucella microti CCM 4915]
          Length = 268

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 79/306 (25%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       L+ Q+ ++   D++ LQE         +
Sbjct: 3   FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                S    +  +A   +      +        D        
Sbjct: 44  FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+   
Sbjct: 93  --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N     N + ++    K +                            +    
Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    +                    R SDH P
Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDHVP 260

Query: 298 ISIDYD 303
           +   ++
Sbjct: 261 VIATFN 266


>gi|159127707|gb|EDP52822.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus A1163]
          Length = 606

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 92/346 (26%), Gaps = 74/346 (21%)

Query: 6   VLALVFFLVPCTASVAQKV---------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + AL       TA+    +          + S+N+N L+               ++    
Sbjct: 272 LTALTVTGSNTTAAAPTDLESAGTCGGVTVGSYNVNNLAPN-------------STTLPK 318

Query: 57  LRQYAKNL--DADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTER 97
           + Q+         +VFLQE+   +                              F     
Sbjct: 319 IAQHIAQYLKSPTLVFLQEIQDDDGPTDDGVVSANKTLSTLVQSIADQGGIRYSFVDIAP 378

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQ------------------QSYPLLGAKDSFSR 139
           +          +I  A       +R+                    +  P L    + + 
Sbjct: 379 VNKEDGGQPGGNIRVAYLYDPSVIRLRDANPGSNTDANEVLPGPELKYNPGLIDPSNNAW 438

Query: 140 AGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKD 193
             +R+ +    E      K + +++H  S     S+E    P      +    QA+ + +
Sbjct: 439 LNSRKPLAAAWETLDGKNKFFTVNVHFTSKGGGSSIEGDARPPVNGGVATREAQAKLVAE 498

Query: 194 WITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           + +    ++S    +++GDFN             +     + L        +        
Sbjct: 499 FTSSILAEDSTAKIIVSGDFNEFTFAQPLETFLAE--SGLEDLDEVAGIAATERYTYLYD 556

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            N   +D+  +                  + +   S   + SDH P
Sbjct: 557 MNCQQLDHMFVSPAL-----ATGAQMHHLHVNTWVSFDDQASDHDP 597


>gi|70999964|ref|XP_754699.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus Af293]
 gi|66852336|gb|EAL92661.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus Af293]
          Length = 606

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 92/346 (26%), Gaps = 74/346 (21%)

Query: 6   VLALVFFLVPCTASVAQKV---------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + AL       TA+    +          + S+N+N L+               ++    
Sbjct: 272 LTALTVTGSNTTAAAPTDLESAGTCGGVTVGSYNVNNLAPN-------------STTLPK 318

Query: 57  LRQYAKNL--DADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTER 97
           + Q+         +VFLQE+   +                              F     
Sbjct: 319 IAQHIAQYLKSPTLVFLQEIQDDDGPTDDGVVSANKTLSTLVQSIADQGGIRYSFVDIAP 378

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQ------------------QSYPLLGAKDSFSR 139
           +          +I  A       +R+                    +  P L    + + 
Sbjct: 379 VNKEDGGQPGGNIRVAYLYDPSVIRLRDANPGSNTDANEVLPGPELKYNPGLIDPSNNAW 438

Query: 140 AGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKD 193
             +R+ +    E      K + +++H  S     S+E    P      +    QA+ + +
Sbjct: 439 LNSRKPLAAAWETLDGKNKFFTVNVHFTSKGGGSSIEGDARPPVNGGVATREAQAKLVAE 498

Query: 194 WITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           + +    ++S    +++GDFN             +     + L        +        
Sbjct: 499 FTSSILAEDSTAKIIVSGDFNEFTFAQPLETFLAE--SGLEDLDEVAGIAATERYTYLYD 556

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            N   +D+  +                  + +   S   + SDH P
Sbjct: 557 MNCQQLDHMFVSPAL-----ATGAQMHHLHVNTWVSFDDQASDHDP 597


>gi|261219142|ref|ZP_05933423.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1]
 gi|261322204|ref|ZP_05961401.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1]
 gi|260924231|gb|EEX90799.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1]
 gi|261294894|gb|EEX98390.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1]
          Length = 310

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 60/303 (19%)

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117
                ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R   
Sbjct: 6   IAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRDTT 65

Query: 118 ---KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKIWVL 160
              +        S+  L   D                 R   R  + + + I G+ + + 
Sbjct: 66  RDGQPIEVNEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLSLF 125

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNRKIN 216
             HLKS     + ++  + S  +   +A+ ++  I +K      +   ++I GDFN    
Sbjct: 126 VAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDYRE 185

Query: 217 Y----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP--- 256
                            +         +    ++    +                     
Sbjct: 186 RILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLERHLC 245

Query: 257 -IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +DY +                      +       + +           + SDHCP+S+
Sbjct: 246 QLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCPVSV 305

Query: 301 DYD 303
             +
Sbjct: 306 TLN 308


>gi|300772811|ref|ZP_07082681.1| possible secreted protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300761114|gb|EFK57940.1| possible secreted protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 269

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 93/325 (28%), Gaps = 77/325 (23%)

Query: 1   MIR-KYVLALVFFLVPCTASVAQK------------VRLVSWNINTLSEQEGVSLWKNSV 47
           M + K ++   F  +   A  + K            + ++++NI+  + +    +     
Sbjct: 1   MNKLKILMLTCFVSIASLACSSDKKEIPEPKTEKSKLTVITYNIHHGAPENSEVV----- 55

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLIN 100
                +   +    K  + D+V LQE+          +   K+        ++S      
Sbjct: 56  -----NLENIANTIKQKNPDLVALQEVDVNVPRSGKVDQAKKLAELLNMNYYFSKSLD-- 108

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWV 159
                  N     +A+  K      +   L            R      +++ NGK +  
Sbjct: 109 ------YNGGEYGVAILSKFPISNTRRLELPMP----VAGEKRTVAMATIDLGNGKTLEF 158

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL                    + QA +L +      +   P +I GD+N + N + 
Sbjct: 159 ASTHLDLNVPN-------------RTAQATFLNEL---SVQLNKPIMIGGDYNAESNSVE 202

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                    +                   +N      ID+   ++ A +     S   + 
Sbjct: 203 -------LTELRKQYTLSCVNGCPNSFPVRNPTK--AIDFVASNKLAVQQYSLLSAVALT 253

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
                    G   SDH P+   Y++
Sbjct: 254 ---------GSYASDHLPVVAIYNY 269


>gi|241206774|ref|YP_002977870.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860664|gb|ACS58331.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 267

 Score = 86.9 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 76/307 (24%), Gaps = 68/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       ++ Q       DI+ LQE    N +   
Sbjct: 3   FSITTWNIN----------------SVRLRMPIVEQLVLKHRPDILCLQETKVTNDLFPA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P            L            +  +A+  +            G  D+       
Sbjct: 47  APL---------RALGYTHIIIHGQKGYHGVAIASRIPLTEDHRQDYCGVGDARH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  + E   +++ + + ++ +    D  + T +P         + +   +    E+  
Sbjct: 93  --ISAIFERGNRRVRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEANT 147

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N                   +     +   + +     L    +   +    
Sbjct: 148 SAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETEGLLEVMKRGAWLDLMRQHVPASEKL 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    L                    R SDH P
Sbjct: 208 YTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLK-------RIEILKEARGWDRPSDHVP 260

Query: 298 ISIDYDF 304
           ++  +DF
Sbjct: 261 VTAHFDF 267


>gi|254422826|ref|ZP_05036544.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7335]
 gi|196190315|gb|EDX85279.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7335]
          Length = 261

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 97/305 (31%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N                   +    + Q+ +    D++ LQE  +   +  A
Sbjct: 1   MKVTSWNVN----------------SIRTRLEQVTQWLQANPVDVLCLQETKVVDKDFPA 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  ++                 +  +A+  +      Q     GA    +  G
Sbjct: 45  QAFIDIGYHAYFY------------GQKSYNGVALVSRAPLESVQ--MGFGAILDEATVG 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +  A + ++      + ++++++ +   ++S +  Y  S          LK ++  + E+
Sbjct: 91  DLDAQKRVISGVLGNVRIVNLYVPNGSSINSEKYEYKLS------WLALLKQYLVHQLEA 144

Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                + GDFN  +                         + +        F K  D   +
Sbjct: 145 HPKLNVCGDFNIALENKDIYTDKNRDKHIMSSPVERQTLRDVLSVGLSDAFRKFTDEGGH 204

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  +  + Y+     +        D +    +R SDH P
Sbjct: 205 -FSWWDYRTNSFARNTGWRIDHHYLSPSLYEIATSCTI-------DTVPRGLERPSDHAP 256

Query: 298 ISIDY 302
           ++++Y
Sbjct: 257 VTVEY 261


>gi|190571508|ref|YP_001975866.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018910|ref|ZP_03334718.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357780|emb|CAQ55235.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995861|gb|EEB56501.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 260

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 84/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                        L  +  +   DIV LQE+         
Sbjct: 2   LKIATWNVN----------------SIRKRINQLCSFIVDSQIDIVLLQEIKCTEE---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y+    + +            + V  K   + +    ++ +          
Sbjct: 42  ------QFPYAEIEKLGYEYAVYGQVARNGVCVLSKYPILEKLKIDIVESHQEARY---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +++ +  K+ V  +++ +    DS    Y        +    L + +    ++  
Sbjct: 92  --IECVIKHSNNKVRVGSVYVPNGQSPDSHTFEYK------LKFFDNLYERMGTLLKNEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFPKEKDSRCNA 247
             +IAGD+N  ++ +   D     ++                 N       +        
Sbjct: 144 LTIIAGDYNVALDEIDVFD--SNLLNGQVCFHIKEREKLRAILNLGFKDAFRISHLNLQQ 201

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + ID+ ++   A   L            DD   + +  SDH P+
Sbjct: 202 FTWWHYQGNSLRNNQGMRIDHMLLSPQAADKLETCYI-------DDRLRKLENPSDHTPV 254

Query: 299 SIDY 302
               
Sbjct: 255 VCVI 258


>gi|150025222|ref|YP_001296048.1| hypothetical protein FP1150 [Flavobacterium psychrophilum JIP02/86]
 gi|149771763|emb|CAL43237.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 348

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 75/301 (24%), Gaps = 63/301 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +  +   ++S+N+  L+    +     +          +  +    + D++ +QE  + 
Sbjct: 94  EASDKDFVVMSYNVRLLNLFNWIPRDNVAQD--------ILHFVNENNPDLLCIQEYSTS 145

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             +                     S       I T  A+  K   V +       + ++ 
Sbjct: 146 AKIDLKI-------------YPYSSIVMKGKKIRTGQAIFSKFPIVNEGELAFPESNNN- 191

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKS---------------FCFLDSLENTYSPSCS 182
                  A+   ++I    + V +IHL+S                      +  ++    
Sbjct: 192 -------AIFADIKIGKDLVRVYNIHLQSIKISPDVKEINENVEGINKQKSQIIFNRISE 244

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              +Q Q  +  +  KK    P +I GD N                        F +   
Sbjct: 245 AFKKQQQQGEIIMNHKKSCKYPIIICGDMNNSAFSYVYRSIKGNM------QDCFEQAGK 298

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         IDY   +                   +         SDH PI    
Sbjct: 299 GFGQTYSFKYYPARIDYIFANSKMRVK-------------NFTNFPDFVNSDHLPIMTRL 345

Query: 303 D 303
            
Sbjct: 346 S 346


>gi|119944778|ref|YP_942458.1| endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
 gi|119863382|gb|ABM02859.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
          Length = 358

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 100/332 (30%), Gaps = 54/332 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +++ ++N+    E              ++       +  Y      D++  QE+ S  A+
Sbjct: 24  LKIATFNLFNYLEPPFAYYDFERIYSAEQWAKKQKWITDYVNEFQPDVIGFQEVFSPEAL 83

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
           A++  +  +  F+                   AIA +   V +          L      
Sbjct: 84  AELLREQGYE-FFQVVDQPEVIDDFICRSPVVAIASKYPIVDIEAVQADTTLALAMGLKE 142

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--------- 187
             + +R+ +   + +          +H KS   +   E + S S      +         
Sbjct: 143 DFSFSRQVLRATINLPHIGDCDCYVVHFKSKRPMLEHEESKSLSGEKNIIEKLKAQVAGG 202

Query: 188 -----------AQWLKDWITQKKESLVPFVIAGDFNRKIN---------------YLGNN 221
                      A  L + I +++E+ +P ++ GDFN  +                   ++
Sbjct: 203 WGSTIQRGSEAALLLVNMIARREETGLPMILMGDFNNILADGVLDHLVTDTLRFVSKLDS 262

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
           D + +     DS   F   +++  +      +    +   +DY ++            F 
Sbjct: 263 DAYLEKYCLKDSWDLFQGTENNTEHILRKPTHYFGASSSVLDYILLSCEFDANYHSSLFE 322

Query: 277 EILYNEDD------IKSRGKRLSDHCPISIDY 302
              YN  D      I  R    +DH  + +  
Sbjct: 323 VSEYNTYDRHLINPIFDRDGESTDHGVVLVTL 354


>gi|71275821|ref|ZP_00652105.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Dixon]
 gi|71902300|ref|ZP_00684290.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|170730198|ref|YP_001775631.1| exodeoxyribonuclease III [Xylella fastidiosa M12]
 gi|71163399|gb|EAO13117.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Dixon]
 gi|71727953|gb|EAO30176.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|167964991|gb|ACA12001.1| exodeoxyribonuclease III [Xylella fastidiosa M12]
          Length = 264

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 86/306 (28%), Gaps = 77/306 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+ SWN+N+L+                   + L+Q+      D++ LQE         
Sbjct: 2   KMRIASWNVNSLN----------------VRLSQLQQWLVEAAPDVLGLQET-------- 37

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    + +    +    +  +A+  +      Q                
Sbjct: 38  --KLEDHQFPGAALAALGYVSVYAGQKTYNGVALLARVALEDVQV------GIPEFEDVQ 89

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +   V+     I V+++++ +   + + +  Y  S          +  W+ ++ +  
Sbjct: 90  RRVIAATVD----GIRVVNLYVVNGQEVGTEKYAYKLS------WLDAVYHWLAEELQRY 139

Query: 203 VPFVIAGDFNRKINYLGNND-----------------DFWKTIDPNDSLIRFPKEKDSRC 245
              V+ GDFN   +     D                    K +     L    +      
Sbjct: 140 PRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAALDKLLGLG--LHDGFRLHHQDA 197

Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           ID  ++ +      +           D +    +R SDH 
Sbjct: 198 GIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGI-------DRVPRGWERPSDHA 250

Query: 297 PISIDY 302
           P  I+ 
Sbjct: 251 PAWIEL 256


>gi|242078097|ref|XP_002443817.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor]
 gi|241940167|gb|EES13312.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor]
          Length = 369

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 95/343 (27%), Gaps = 88/343 (25%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              +  + ++WN N+L            + R  SD+    Q    LD D++ +QE+    
Sbjct: 44  PAEEPRKFLTWNANSL------------LLRMKSDWPAFSQLVARLDPDVICVQEVRMPA 91

Query: 79  AVAKVFPKNTWCI----------------FYSTERLINHSKRDSNNDIHT-AIAVRKKNV 121
           A +K  PKN   +                  ST    ++    S +D      A+  K  
Sbjct: 92  AGSKGAPKNPSELKDDTSSSRDEKQVVLRALSTSPFKDYRVWWSLSDSKYAGTAMFIKKK 151

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
              ++    L    S      R     ++    +   +L+ +  +     +       S 
Sbjct: 152 FEPKKVSFNLDRTSSKHETDGR-----VIIAEFESFLLLNTYAPN-----NGWKEEENSF 201

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------------------ 217
               +  + + +++        P +  GD N                             
Sbjct: 202 QRRRKWDKRMLEFVQHV---DKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYTPPNQED 258

Query: 218 -------LGNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYF 260
                        F   +     +  +               S     K    ++ IDYF
Sbjct: 259 CGQPGFTPAERRRFGNILFQGKLVDAYRHLHKEKDMDGGFSWSGHPIGKYRGKRMRIDYF 318

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ++ +     ++           D     G   SDHCP++++  
Sbjct: 319 LVSEQLKDRIVSCEMHGRGIELD-----GFYGSDHCPVTLELS 356


>gi|15927579|ref|NP_375112.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus N315]
 gi|262053147|ref|ZP_06025312.1| truncated beta-hemplysin [Staphylococcus aureus 930918-3]
 gi|13701798|dbj|BAB43091.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus N315]
 gi|259158954|gb|EEW44033.1| truncated beta-hemplysin [Staphylococcus aureus 930918-3]
          Length = 289

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 82/278 (29%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
           + N  +   +D      Y K  + D+V   E     A  K+         Y T       
Sbjct: 17  YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 74

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 75  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 133

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K + V+  H +S    DS          + ++Q + + D++ +          I GD N 
Sbjct: 134 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 189

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D  K ++ ND L                  N        +DY   D++  +
Sbjct: 190 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 248

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 249 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 286


>gi|145220782|ref|YP_001131460.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK]
 gi|315442264|ref|YP_004075143.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1]
 gi|145213268|gb|ABP42672.1| Exodeoxyribonuclease III [Mycobacterium gilvum PYR-GCK]
 gi|315260567|gb|ADT97308.1| Exodeoxyribonuclease III [Mycobacterium sp. Spyr1]
          Length = 272

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/305 (9%), Positives = 67/305 (21%), Gaps = 61/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  + +  D D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRARVDRVTDWLERADVDVLAMQETKCSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  +      +         S       
Sbjct: 41  ------QFPTMPFAALGYDVVHCGFSQWNGVAIASRVGIDAVEVGFEGQPTWSDKPEAEA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
            A    +      + V  +++ +   +DS   TY        +    L +          
Sbjct: 95  AAEARALGATCGGVRVWSLYVPNGRSIDSPHYTYK------LKWLAALHNTAQGWLADDP 148

Query: 203 -VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P  + GD+N                           +  I                  
Sbjct: 149 STPVALVGDWNIAPVDDDVWDISLFSESTHVTAPERAAFNAIVDAGFTDVVRPFTPGP-G 207

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +      + +     +         +      SDH P
Sbjct: 208 TFTYWDYTQLRFPKNRGMRIDFILGSPTLAELVTHAEIARDERKTGKNRVGS--PSDHAP 265

Query: 298 ISIDY 302
           + +D 
Sbjct: 266 VVVDL 270


>gi|261856746|ref|YP_003264029.1| endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus
           c2]
 gi|261837215|gb|ACX96982.1| Endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus
           c2]
          Length = 286

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 85/295 (28%), Gaps = 55/295 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLW--KNSV-----KRTTSDYTLLRQYAKNLDADI 68
            +    + +RL+S+NI           +            +   +   + Q       D+
Sbjct: 24  PSTHALRPLRLLSYNIQAGIGTRNFRDYVLNGWKHVLPFPKRMQNLDHIAQLLSQF--DL 81

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           + LQE    +  +    +  +    S          RD  +    A+ +  +      + 
Sbjct: 82  IGLQEADGGSLRSHFLNQIEYLAMRSNMPFWATRINRDLGHWGQHALGMLSRVEPYHIER 141

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y L        R   R  V    +  G+++ V   HL             S S      Q
Sbjct: 142 YALPA------RIPGRGVVLADFDWYGQRVRVQVSHL-------------SLSDRARRAQ 182

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L   I + +E     ++  DFN   N           ++    L   P         
Sbjct: 183 LDRL---IARCREFDGVNIVMADFNCTPNNRDLQRLC---LEAGLKLPFAPPLT------ 230

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +   K  ID+ ++ +N                 + + +    +SDH P+S+  
Sbjct: 231 YPSWEPKRAIDHILVSENI--------------EIESVDALTYGVSDHAPLSMQI 271


>gi|291543155|emb|CBL16265.1| exodeoxyribonuclease III [Ruminococcus bromii L2-63]
          Length = 252

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 74/303 (24%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L                         + K++DADI  LQE         + 
Sbjct: 3   KLISWNVNGLRACVTKGFE---------------NFFKDVDADIFCLQETKLQEGQIDLL 47

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +             ++   ++  A+  K   +       +   D   R     
Sbjct: 48  LEGYHQYW-----------CYADKKGYSGTAMFTKEEPLNVCYGIGIDEHDHEGR----- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++       +V+  +  +        +             + L++          P
Sbjct: 92  ----VITAEFDNCFVVTCYTPNSQSELKRLDYRMKWEDDFKAYLKKLEE--------KKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GD N                              +  +  +  +            
Sbjct: 140 VIMCGDLNVAHKEIDLKNPKTNRKNAGFTDEERSKMTALLDDGFIDTYRYFYPDTEGVYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ +     L        +             SDHCP+ +
Sbjct: 200 WWSYRFKAREKNAGWRIDYFIVSKALESKLDGAKIHTEIL-----------GSDHCPVEL 248

Query: 301 DYD 303
             D
Sbjct: 249 TID 251


>gi|320007613|gb|ADW02463.1| exodeoxyribonuclease III Xth [Streptomyces flavogriseus ATCC 33331]
          Length = 260

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE          
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCIQETKCT------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +    +       +AV  +       +  L G  +       R
Sbjct: 39  ----LEQFPTDALREAGYESAVNATGRWNGVAVLSRVGLTDVVTG-LPGGPEYDGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V        V  +++ +   +      Y        +  + L++ +       +
Sbjct: 94  A-----VSATCGGARVWSVYVPNGREVAHEHYAYK------LRWLEALREAVAADAAGTL 142

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N         D                    +         P+         
Sbjct: 143 PFAVLGDYNIAPTDEDVWDPAVFEGATHVTPAEREALAALRGTGLSDVVPRPLKYD-RPY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +      +            D  + +GK  SDH P+ 
Sbjct: 202 SYWDYRQLAFPKNRGMRIDLVYGNAPFAAAVKDSYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|281424056|ref|ZP_06254969.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           oris F0302]
 gi|281401839|gb|EFB32670.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           oris F0302]
          Length = 313

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 79/297 (26%), Gaps = 39/297 (13%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAK 82
           +  L +         +  R       + Q               D+V L E+ +   +  
Sbjct: 33  VEYLPDSYHHW----NANRYWKKLNHIGQEIIACGGEGNSWMLPDLVALCEVENDTVMRD 88

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  ++          + N     S +     +A+          ++  +           
Sbjct: 89  LTKRSLLRQARYEYVMPN-----SPDVRGIDVALLYSPFTFRLLNWHAIRVAPIKGMRPT 143

Query: 143 RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R  +    +I +G  + V  +H  S    +        +     QQA        +   +
Sbjct: 144 RDILYAAGQIISGDTLHVFVVHAPSRSGGEIATRPNRMAVVKRLQQAVD----SVKSNST 199

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               +IAGDFN     +         +     +    K         K       +D+ +
Sbjct: 200 SAHIIIAGDFNDYTQDVSIQYLISCGLAD---VSASAKGTHGAKGTYKYRGEWGSLDHVL 256

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYDF 304
             +         + ++  +   D +  G                 SDH P+ + +DF
Sbjct: 257 CSEALVPLFRSCTIADFPFLLTDDEVYGGLQPLRNFHGAKYLNGFSDHLPLVVKFDF 313


>gi|319899105|ref|YP_004159198.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73]
 gi|319403069|emb|CBI76624.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73]
          Length = 260

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 88/303 (29%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNI                    + +  L ++ K    DIV LQE+ S +     
Sbjct: 1   MKIATWNIAG----------------IKARHETLCKWLKQNQPDIVCLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      T   + +            +A+  K V             D  +R    
Sbjct: 41  ------NFPRDTIESLGYHIETHGQKSFNGVAILSKKVPDEIIRRLPGDNNDKQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESL 202
             +E +   N   I V  ++L +   ++S +  Y           A+ L  +        
Sbjct: 92  --IETVYSTNKGSIRVASLYLPNGNPINSEKYLYKMEWMKRFYTHAKSLLAY-------E 142

Query: 203 VPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++AGD+N                   +L      ++ I             D+   +
Sbjct: 143 EPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIFQCIVHLGFYDAIRCVTDTPSFS 202

Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +         N I ID+ ++   A   L       I           ++ SDH PI +
Sbjct: 203 FWDFQAGAWKKNNGIRIDHLLLSPEAADQL-------ICAYSQTEMRGHQKPSDHIPIWV 255

Query: 301 DYD 303
             +
Sbjct: 256 QLN 258


>gi|17986911|ref|NP_539545.1| hypothetical protein BMEI0628 [Brucella melitensis bv. 1 str. 16M]
 gi|17982554|gb|AAL51809.1| hypothetical protein BMEI0628 [Brucella melitensis bv. 1 str. 16M]
          Length = 337

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 60/303 (19%)

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117
                ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R   
Sbjct: 33  IAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRDTT 92

Query: 118 ---KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKIWVL 160
              +        S+  L   D                 R   R  + + + I G+ + + 
Sbjct: 93  RDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLSLF 152

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNRKIN 216
             HLKS     + ++  + S  +   +A+ ++  I +K      +   ++I GDFN    
Sbjct: 153 VAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDYRE 212

Query: 217 Y----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP--- 256
                            +         +    ++    +                     
Sbjct: 213 RILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLERHLC 272

Query: 257 -IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +DY +                      +       + +           + SDHCP+S+
Sbjct: 273 QLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCPVSV 332

Query: 301 DYD 303
             +
Sbjct: 333 TLN 335


>gi|330888867|gb|EGH21528.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 261

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 88/295 (29%), Gaps = 51/295 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               S +  + +++ N++                        LR+  + + ADIVFLQE+
Sbjct: 11  ATPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEV 60

Query: 75  ----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                S+    K +PK +   F +     +  + +     D     A+  K   +  ++ 
Sbjct: 61  HGEHQSHARSVKDWPKISQYEFLADSMWNDFAYGRNAVYPDGDHGNALLSKYPIIQHENL 120

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            +     S      R  +  ++E+      V  + +                 S   QQ 
Sbjct: 121 DI-----SIHGTEQRGLLHCILEMPYTG-RVHAVCVHLGLR-----------ESHRRQQL 163

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L + + +      P ++AGDFN               ++       F +   +   + 
Sbjct: 164 NLLAELMER-LPEGEPVIVAGDFNDWRQRAD------ALLEGTGLHEVFVERFGAPAKSF 216

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 + +D   +           S                 LSDH P++++  
Sbjct: 217 PARWPLLRLDRIYIRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 260


>gi|295132080|ref|YP_003582756.1| endonuclease [Zunongwangia profunda SM-A87]
 gi|294980095|gb|ADF50560.1| endonuclease [Zunongwangia profunda SM-A87]
          Length = 346

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/337 (12%), Positives = 91/337 (27%), Gaps = 49/337 (14%)

Query: 6   VLALVFFLVPCTASVA--QKVRLVSWNINTLSEQEG-----------VSLWKNSVKRTTS 52
           VL L++  +  +        + +  +N   L + +                  + ++   
Sbjct: 8   VLFLLYCGIGFSQDQDTYDVLTIAFYNTENLFDTQNDDFTFDDDRTPEGKDAWTKEKYEL 67

Query: 53  DYTLLRQYAKN-------LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
               + Q              +I+ L E+ +   +  +          +    I H    
Sbjct: 68  KLNHIGQVVSEIGTELSGHSPEIIGLCEVENIRVLEDLLNTEKLQ---NKNYKIIHFDSP 124

Query: 106 SNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
               I  A+    K       ++  +L   +   R   R  +     I  +    L  H 
Sbjct: 125 DRRGIDNALLYNTKVFTPTQSRNIEVLIRNEEGKRIYTRDILVATGRIQNENFAFLVNHW 184

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
            S    +     Y  S +L++   + + D +    +  +  +  GDFN         +  
Sbjct: 185 PSRSGGEKASRNYRKSAALVN---RKICDSL-WAIDPSLKIINMGDFNDDPKNKNVKNVL 240

Query: 225 WKTIDPNDSLIRFP--KEKDSRCNANKNLRNKIPIDYFVMDQ-------NAYKFLIQESF 275
             +  PN      P  K       +     N    D  ++           +++     F
Sbjct: 241 KTSESPNQFQFYNPMLKLYKKGVGSLAYRDNWNLFDQILISGAMMTKNYEHFQYYKAGVF 300

Query: 276 SEILYNEDDIKSRGKRL------------SDHCPISI 300
            +        + +G               SDH P+ +
Sbjct: 301 KKDYLVTSTGQYKGYPFRSYGYNGYLGGYSDHFPVYL 337


>gi|325106148|ref|YP_004275802.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
 gi|324974996|gb|ADY53980.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
          Length = 372

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 85/306 (27%), Gaps = 62/306 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  VRL+++N++   +                    +         D++ +QE  +    
Sbjct: 103 SSSVRLMTYNVHHFKQFGSEVDSNARN--------NILDLINEEQPDVIAIQEFLTRKKG 154

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                 N   I  + +     +  +    +   IA+  K   V +     L         
Sbjct: 155 KLKSENNIRKILGTEDYYFYSTSGNDYESM--GIAIFSKLPIVNKGKLTELDP------K 206

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179
           G+   + + V+ N K   +  IHL S  F       +                       
Sbjct: 207 GSNNGLWIDVKKNNKVFRIYTIHLASIAFAPVDYYYFKRISNMKTEDEDIKHGRRILSRL 266

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +    ++Q + LK +         PFVI GDFN        N    +      +    
Sbjct: 267 KSAFVRRAKQVEILKSYTDSC---KTPFVIMGDFNDTPVSYSVN----QISKDLKNSFIE 319

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 R            IDY +  ++              ++    K   K  SDH P
Sbjct: 320 KGVGIGRTYNGDFPNF--QIDYILTTKD--------------FDIHTYKIIKKAYSDHYP 363

Query: 298 ISIDYD 303
           + +D  
Sbjct: 364 VRVDVS 369


>gi|253580808|ref|ZP_04858071.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847878|gb|EES75845.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 251

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 78/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +    G    ++                  LDADI  LQE        K+
Sbjct: 1   MKLISWNVNGIRACIGKGFEES---------------FAALDADIFCLQETKCQQGQVKL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +             +N   ++  AV  K   +      + G          R
Sbjct: 46  ELPGYYQYW-----------NYANRRGYSGTAVFTKKEPLSV----VYGIGIEKHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +         +            +    ++  K +   
Sbjct: 91  -----VITLEYEKFYLVTVYTPN-------SQSELRRLEYRMHWEEDFLAYL-LKLQESK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                           +  +  +  +  F           
Sbjct: 138 PVICCGDFNVAHQEIDLKNPKTNRKNAGFTDEERACFGKVLESGFIDTFRYFYPDVEGRY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+        L                      SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFITSPQLKDKLKGAEIH-----------SEIMGSDHCPVE 246

Query: 300 IDYD 303
           +   
Sbjct: 247 LQIT 250


>gi|238922913|ref|YP_002936426.1| exodeoxyribonuclease [Eubacterium rectale ATCC 33656]
 gi|238874585|gb|ACR74292.1| exodeoxyribonuclease [Eubacterium rectale ATCC 33656]
          Length = 251

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                         +  ++DAD   +QE     A    
Sbjct: 1   MKFISWNVNGLRACVQKGF---------------LDFFNSIDADFFCIQE-SKLQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  KN  +       +   D   R    
Sbjct: 45  LDLPGYHQYWNYAEKKGY----------SGTAIFAKNEPLSVSYGIGIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++  +  +                   Q     ++++    ++  
Sbjct: 91  -----VITLEYDNFYLVTCYTPN-------SQNELKRLPYRMQWEDDFREYLKT-LDAKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N   N                          +  +     F           
Sbjct: 138 PVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKMTELLGSGFTDTFRYFYPDAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  +     L + +    +             SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFITSKRINDKLKKAAIHTDVL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +D +F
Sbjct: 247 VDIEF 251


>gi|54296503|ref|YP_122872.1| hypothetical protein lpp0534 [Legionella pneumophila str. Paris]
 gi|53750288|emb|CAH11682.1| hypothetical protein lpp0534 [Legionella pneumophila str. Paris]
          Length = 257

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 89/294 (30%), Gaps = 50/294 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                 + V L+++NI+       V                +R     L+ D VFLQE+ 
Sbjct: 6   SMQPEVRSVSLITYNIHKGFGVGAVRFL----------LPEMRDAIAGLNPDFVFLQEVQ 55

Query: 76  --SYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                   ++           I  +      ++K       H   A+  K      +S  
Sbjct: 56  GKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSGHHGNAILSKYPFESFESIN 115

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L           +R  +   ++++   I +L +HL  F              +  ++Q +
Sbjct: 116 LSN-----MNRASRGILHTQLKLDNNIIHLLCVHLGLFK-------------AERTEQCK 157

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L   I        P ++AGDFN   +    +    + +   ++ +    +      +  
Sbjct: 158 ALIQRIKDVVPKNEPMIMAGDFNDWRHV--ISKILAENLGIEEAFVALEGQH---ARSFP 212

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++  + +D         + +                   + LSDH P+   ++
Sbjct: 213 AIKPALCVDRVYFRGMKVQEVAC-----------LQGKPWRMLSDHLPLYARFE 255


>gi|325917489|ref|ZP_08179695.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
 gi|325536283|gb|EGD08073.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
          Length = 259

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+  +   D+V +QE  +  +    
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLTDFAPDVVGIQETKLEDHKFPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +   +                 +  +A+  +   +  Q          F    
Sbjct: 45  AALAALGYRSVFC------------GQKTYNGVAILSRAPALDVQ-----MGIPGFDDVQ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +  + + DWI Q+ + 
Sbjct: 88  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLEAVHDWIAQELQR 136

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246
               V+ GDFN   +    +D         +                L    +       
Sbjct: 137 HPQLVVLGDFNIAPDARDVHDPVVWNEAHILTSAAERAALEKLLALGLHDAFRLHHDDAE 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        +           D      +R SDH P
Sbjct: 197 QFSWWDYRQAAYRRNLGLRIDLTLVSDALRARAVGAGI-------DREPRTWERPSDHAP 249

Query: 298 ISIDY 302
             +  
Sbjct: 250 AWVQL 254


>gi|307294591|ref|ZP_07574433.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1]
 gi|306879065|gb|EFN10283.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1]
          Length = 256

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 84/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN                   +    L ++      DI  LQE+ + +     
Sbjct: 1   MRIATFNING----------------IKARLPRLLEWLDETRPDIACLQEIKTSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142
                          + +            +A+  +    V  +       +D  SR   
Sbjct: 41  ------TFPVKDIEDVGYGAIWHGQKGFNGVAILARGETPVEVRRGLEGEPEDEHSRY-- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +E + K + V  I+L +       +  Y        +  + L+   T+     
Sbjct: 93  -------LEADVKGLRVASIYLPNGNPQPGPKFDYK------LRWMKRLRARATEIWAEE 139

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           VP ++AGD+N                       +   + + +    +     +       
Sbjct: 140 VPAILAGDYNVIPRDKDVYSVKAMADDALMQPESRAAYRRLLGDGWTDAIASRHPAGGVW 199

Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              + +           ID+ ++   A   LI           D      ++ SDH P  
Sbjct: 200 TYWDYQMNAWPRDAGFRIDHLLLSPAAADRLIDAQV-------DKDFRGREKASDHAPTW 252

Query: 300 IDYD 303
           ++  
Sbjct: 253 VELS 256


>gi|317056539|ref|YP_004105006.1| exodeoxyribonuclease III Xth [Ruminococcus albus 7]
 gi|315448808|gb|ADU22372.1| exodeoxyribonuclease III Xth [Ruminococcus albus 7]
          Length = 250

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 71/304 (23%), Gaps = 79/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N                           +    DADI  +QE       A  
Sbjct: 1   MKFISWNVNGFRACLQKGFG---------------DFFTAADADIFCIQETKMQPDQADF 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+     F+S                ++  AV  K   +  +        D        
Sbjct: 46  SPEGYLKYFHSAV-----------KKGYSGTAVYTKKEPLEVKFGLNGTHTDEGR----- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  + +  ++ +        +        +      L        +   
Sbjct: 90  -----VITCEFEDYYFVCCYVPNAQNELKRIDYRMEFEDDMRAYLSQL--------DKTK 136

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                           +  +        F +    +  A 
Sbjct: 137 PVVYCGDLNVAHEEIDLKNPKSNAGNAGFSDEERGKFTELLGAGFADTFRRLYPDKAGAY 196

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     +                      SDHCP+ 
Sbjct: 197 SWWSYRFNARKNNAGWRIDYFVVSERLMDKVKDSKIL-----------SDITGSDHCPVE 245

Query: 300 IDYD 303
           +D +
Sbjct: 246 LDIE 249


>gi|146310939|ref|YP_001176013.1| endonuclease/exonuclease/phosphatase [Enterobacter sp. 638]
 gi|145317815|gb|ABP59962.1| Endonuclease/exonuclease/phosphatase [Enterobacter sp. 638]
          Length = 253

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 73/286 (25%), Gaps = 49/286 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++++ N +                        LR   + + ADIV LQE+   + +  
Sbjct: 9   SLKILTINTHKGFTAFNRRF----------ILPELRDAVRTVGADIVCLQEVMGAHEIHP 58

Query: 83  V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  T   F +     +++        + H   AV  +                S
Sbjct: 59  MHVENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              +  R  +   +        +    +                 +    Q   +  W+ 
Sbjct: 114 VGESEKRGLLYCRITPPELAFPIHVGCVHLGLR-----------EAHRQAQLNMMAKWVN 162

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P V+AGDFN       +       +D       F +               + 
Sbjct: 163 A-LPEGEPVVVAGDFNDWRQRANHPLKAQAGLDE-----IFTRAHGRPARTFPVSFPVLR 216

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +                           + LSDH P+S + 
Sbjct: 217 LDRIYVKNAHASS-----------PTALALRTWRHLSDHAPLSAEI 251


>gi|282917354|ref|ZP_06325109.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus D139]
 gi|283771169|ref|ZP_06344060.1| phospholipase C [Staphylococcus aureus subsp. aureus H19]
 gi|282318981|gb|EFB49336.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus D139]
 gi|283459763|gb|EFC06854.1| phospholipase C [Staphylococcus aureus subsp. aureus H19]
          Length = 274

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 82/278 (29%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
           + N  +   +D      Y K  + D+V   E     A  K+         Y T       
Sbjct: 2   YPNWGQYKRADLIGQSNYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 60  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K + V+  H +S    DS          + ++Q + + D++ +          I GD N 
Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D  K ++ ND L                  N        +DY   D++  +
Sbjct: 175 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271


>gi|260173227|ref|ZP_05759639.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2]
 gi|315921500|ref|ZP_07917740.1| metallophosphoesterase [Bacteroides sp. D2]
 gi|313695375|gb|EFS32210.1| metallophosphoesterase [Bacteroides sp. D2]
          Length = 263

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 80/288 (27%), Gaps = 67/288 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++++N+                    +    L  + K+   D V LQE+ S     + 
Sbjct: 27  VRVMTYNLRFG---------------ELASLEELAHHIKSFKPDFVALQEVDSKTDRKRT 71

Query: 84  FPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +          Y T     + K    +  +  I +  K   +  Q   L        R
Sbjct: 72  PHQKGKDFISELAYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHER 131

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  +E L E+    I     HL               S    ++Q +++        
Sbjct: 132 ---RAMLEGLFEMGNDTIVFTSTHL------------DVNSQETRAEQIKFITGHFKNY- 175

Query: 200 ESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               P ++ GDFN +            F  + D                      +  I 
Sbjct: 176 --KYPVILGGDFNARHYSEVIRGMDSWFAASNDD---------------FGMPAWKPVIK 218

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           IDY          +I     + L            LSDH PI  + ++
Sbjct: 219 IDYLFAYPQKGWRVISTQTVQSL------------LSDHLPIITELEY 254


>gi|262200666|ref|YP_003271874.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
 gi|262084013|gb|ACY19981.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
          Length = 262

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 79/301 (26%), Gaps = 63/301 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  + ++ D D++ +QE   ++    +
Sbjct: 1   MRIATWNVN----------------SIRARSETVVAWMEHHDVDVLAMQETKCHDDAFPL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      +  +  +         +  +A+  +      +         S       
Sbjct: 45  M----------SFLVAGYDVTHVGQGAYNGVAIASRVGLDEIEVGFEGMPPLSVDGREIV 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  +     G  + V  +++ +   +D     Y  +        + L D          
Sbjct: 95  EARAISARCAG--VRVWSLYVPNGRAIDDPHYRYKLA------WLEALADRSALWLAHDP 146

Query: 204 P--FVIAGDFNR----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++AGD+N                               +D   +    P       
Sbjct: 147 AAQIMLAGDWNVAQRDTDVWDPGFFAGKPHVSDAERAAIAAFLDAGLTDSALPYADGYTF 206

Query: 246 NANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +LR      + IDY +                +    D    + K  SDH P+ +D
Sbjct: 207 WDYTSLRFPRNEGMRIDYALCSPALDTR-------VLGATVDRDARKPKGASDHAPVIVD 259

Query: 302 Y 302
            
Sbjct: 260 L 260


>gi|78486391|ref|YP_392316.1| exonuclease III [Thiomicrospira crunogena XCL-2]
 gi|78364677|gb|ABB42642.1| Exodeoxyribonuclease III [Thiomicrospira crunogena XCL-2]
          Length = 273

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 81/314 (25%), Gaps = 74/314 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+N+N                        L+    +   DI+ LQE    +     
Sbjct: 1   MKIVSFNVN----------------SVRMRLHQLQALTDSYAPDIIGLQETKVQD----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         H  +A+  K   VL+ S          ++    
Sbjct: 40  -----HEFPLADIEAMGYHAIYMGQKTHYGVAILYKKSLVLKASQYGWSHDGEDAQKR-- 92

Query: 144 RAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +    E   G  + V++       F      ++           Q L  ++ ++    
Sbjct: 93  -IIMADFEDQKGNDVRVIN-----GYFPQGENRSHPIKFPAKEAFYQDLMTYLKEECSPE 146

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
              V+ GDFN                        ++L    ++W T+        + K  
Sbjct: 147 QNLVVIGDFNISPEDKDIGIGEPNRKRWLRDGKTSFLPEEREWWATLIGWGLKDTYRKVH 206

Query: 242 DSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                       +             ID  +  +   +  +                   
Sbjct: 207 PEEDRIFSWFDYRSKGFDAEPKRGLRIDTVLATKCLTEKAVDSGV-------AYDIRGMV 259

Query: 291 RLSDHCPISIDYDF 304
           + SDH P+  ++ F
Sbjct: 260 KPSDHAPVWTEFKF 273


>gi|329895423|ref|ZP_08271004.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088]
 gi|328922306|gb|EGG29652.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088]
          Length = 256

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 77/306 (25%), Gaps = 78/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +RLVSWN+N +        +++                + +  D++ LQE        + 
Sbjct: 1   MRLVSWNVNGIRAVTKKDFFES---------------FERMAPDVLCLQETKAQDDQVLE 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +     +S                ++  A+  +   +   +   +   D+  R  
Sbjct: 46  ALTELDPAYKVFSNSAEK---------KGYSGTAIITRVEPISVTADMGMPEHDTEGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++    +  +++ ++  +        +         +   + L+         
Sbjct: 95  -------VLCAEFETFYLVTVYTPNSGSELKRLDYRQSWDKDFADYLKTLEQ-------- 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS---------------LIRFPKEKDSRCN 246
             P V+ GD N     +                               +   +  +    
Sbjct: 140 TKPVVVCGDLNVAHQDIDLARPKQNYNKSAGYMQAEIDGFDRLVDLGFVDTYRHFNPNTA 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF++       L                      SDHCP
Sbjct: 200 KYSWWSYRAGAREKNIGWRIDYFLVTPELTSSLTGAEI-----------YNDVYGSDHCP 248

Query: 298 ISIDYD 303
           + ID  
Sbjct: 249 VGIDIS 254


>gi|292490695|ref|YP_003526134.1| endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4]
 gi|291579290|gb|ADE13747.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4]
          Length = 286

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 84/304 (27%), Gaps = 58/304 (19%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQY 60
            L       +++    +RL+S+NI           +     +              +   
Sbjct: 3   TLALHSPLVSSTKRHPLRLLSYNIQAGVTTSRYHHYLTRSWKHILPDVHRHKTMASIAGV 62

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
               D DIV LQE    +         +    + +        ++R +N    +  A+  
Sbjct: 63  IS--DFDIVGLQEADVGSLRTGFVNQAELLAELCHFPHWHQQATRRFANIAQQS-NALLS 119

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +      +SY L G          R A+          + VL IHL              
Sbjct: 120 RIQPNYVRSYRLPGL------VPGRGAILAHFGNPENPLIVLIIHLALG----------- 162

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                 +QQ   +   + +        V+ GD N + +    +    KT     +     
Sbjct: 163 --RRSRTQQLSLISHLVHEHP----YVVVMGDLNCQPHSPELSALLQKTGLKAPATKIAT 216

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                      + R K  ID+ ++  +     +                    +SDH P+
Sbjct: 217 ---------YPSWRPKRHIDHILVSPSLEVTQVCA--------------LEHTVSDHLPL 253

Query: 299 SIDY 302
           + + 
Sbjct: 254 ATEI 257


>gi|255326144|ref|ZP_05367231.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296]
 gi|255296855|gb|EET76185.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296]
          Length = 288

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/314 (8%), Positives = 76/314 (24%), Gaps = 66/314 (21%)

Query: 15  PCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            C+A    + +++ +WNIN                   +    +  +    D D++ LQE
Sbjct: 13  ACSAPAKLEGMKIATWNIN----------------SIRARENRVEDWLDEHDVDVLALQE 56

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             + +              +     + +       +    +A+  +      Q       
Sbjct: 57  TKTKDE----------TFPFDLFEFMGYEVAHFGLNQWNGVAIASRVGLEDVQRG-FDNQ 105

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                           +      + V  +++ +   L      Y        +  + L+ 
Sbjct: 106 PHFGKTGEPEVLEARAIGATCGGVRVWSLYVPNGRGLTDPHMDYK------LRWMEALRQ 159

Query: 194 WITQKKESLVP--FVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSL 234
            +  +          + GD+N                             +  +     +
Sbjct: 160 NVHNELADNPQSQLALVGDWNVAPEDADVWDIDYFLRNEMTHVSAPERRAFAALLEEGMV 219

Query: 235 IRFPKEKDSRCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                              +      + ID+ +        + +          D ++  
Sbjct: 220 DVVRPHTPGEYTYWDYQAGRFTKDEGMRIDFQLFSPALAARVERAWI-------DKVERA 272

Query: 289 GKRLSDHCPISIDY 302
           G+  SDH P+ ++ 
Sbjct: 273 GEGASDHTPVVVEI 286


>gi|224024813|ref|ZP_03643179.1| hypothetical protein BACCOPRO_01544 [Bacteroides coprophilus DSM
           18228]
 gi|224018043|gb|EEF76047.1| hypothetical protein BACCOPRO_01544 [Bacteroides coprophilus DSM
           18228]
          Length = 251

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 75/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                       R+  + LDAD   LQE          
Sbjct: 1   MKLISWNVNGLRACCDKGF---------------REAFQTLDADFFCLQETKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+      +       +   D   R    
Sbjct: 45  LSFEGYTSYWNYAEKKGY----------SGTAIFTHLKPLNVTYGLGIDVHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +        +               L        +   
Sbjct: 91  -----VITLEMDNFYLVTVYTPNSQDGLKRLDYRMTWEDDFRNYLLEL--------DKKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + ++ +     +  F      +    
Sbjct: 138 PVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQILLDAGFIDTFRYFYPEQTGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  +     L        ++            SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFLASRRLADKLESAKIHTEIF-----------GSDHCPVE 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 VTLN 250


>gi|148271654|ref|YP_001221215.1| putative exonuclease III [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829584|emb|CAN00499.1| putative exonuclease III [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 278

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 76/302 (25%), Gaps = 59/302 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +    D D++ +QE+         
Sbjct: 1   MRVATWNVN----------------SIRTRVGRVVDWLVREDVDVLAMQEIKCK------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  +       +      +     A  +
Sbjct: 39  ----PEQFPMQAFEEAGYEVAVHGLSQWNGVAIASRLPLEDVVTTFEGMPRFGKPDASGQ 94

Query: 144 RAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +E          + +  +++ +   LD    +Y      L   A   + W+    +  
Sbjct: 95  PPLEARAMGATVAGVRLWSLYVPNGRALDDPHYSYK--LEWLGALAADTRAWLA--SDPE 150

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P  + GD+N                  +        +                      
Sbjct: 151 TPLALMGDWNVAPLDTDVWDPALFEGKTHTSEPERAAFAAFLDAGLTDVVRPSIPEGYTY 210

Query: 248 NKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               + +      + ID+ + +    + +               + +G   SDH P+++D
Sbjct: 211 WDYQQLRFPRNEGMRIDFILGNDRFQELVGSPRIH-------RDERKGDGPSDHVPVAVD 263

Query: 302 YD 303
            D
Sbjct: 264 LD 265


>gi|237753149|ref|ZP_04583629.1| exodeoxyribonuclease LexA [Helicobacter winghamensis ATCC BAA-430]
 gi|229375416|gb|EEO25507.1| exodeoxyribonuclease LexA [Helicobacter winghamensis ATCC BAA-430]
          Length = 250

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 80/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWN+N L                        ++  +++AD+  +QE          
Sbjct: 1   MRLISWNVNGLRACMNKGFM---------------EFFNSVNADVFCIQE-SKMQREQAE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  ++++     +          + +A+  K   +  +    +   D   R    
Sbjct: 45  FDFPNYEEYWNSAEKKGY----------SGVAIFSKIKPLSVEYDMGIAHHDKEGRI--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +       ++++++  +                      + L+        S  
Sbjct: 92  ------ITAEFSDFYLVNVYTPNSKRELERLEYRMEWEDDFRTFLKNLE--------SKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +  +     +      +  A 
Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMSALLDSGFTDTYRHFYPEKQGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  +     L   S    +             SDHCP+ 
Sbjct: 198 TWWSYMGKARANNTGWRIDYFLCSKILDSRLKSASIYPEIL-----------GSDHCPVG 246

Query: 300 IDYD 303
           I+ D
Sbjct: 247 IEID 250


>gi|222087552|ref|YP_002546089.1| exodeoxyribonuclease III [Agrobacterium radiobacter K84]
 gi|221725000|gb|ACM28156.1| exodeoxyribonuclease III [Agrobacterium radiobacter K84]
          Length = 267

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 76/306 (24%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       ++ Q+      DI+ LQE    N +   
Sbjct: 3   FSIATWNIN----------------SVRLRMPIVEQFLMQSRPDILCLQETKVPNEL--- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   +     L            +  +A+  +               DS       
Sbjct: 44  ------FPYAPLRALGYEHIIIHGQKGYHGVAIASRFPLTEDHRQDYCNVGDSRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  + E  G++I V + ++ +    D  + T +P         + +   +    E   
Sbjct: 93  --ISAIFERGGRRIRVHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KHLHANAEQNT 147

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N                   +     D   + +     L    +   +    
Sbjct: 148 SAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLLEVMKRGAWLDLMRQHVPANEKL 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    L          +         R SDH P
Sbjct: 208 YTWWSYRAKDWEVADRGRRLDHIWSSSDLGPLLQ-------RIDILKAARGWDRPSDHVP 260

Query: 298 ISIDYD 303
           ++  ++
Sbjct: 261 VTAHFN 266


>gi|326384660|ref|ZP_08206338.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395]
 gi|326196627|gb|EGD53823.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395]
          Length = 291

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 85/320 (26%), Gaps = 71/320 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++++ +VS+N+N +                         +      D+V LQE+      
Sbjct: 3   SEQLTVVSFNVNGIRAARRRGFD---------------SWLAERSPDVVGLQELRCPP-- 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +V   + +   + T  +               +A+  K+     +++     K    R 
Sbjct: 46  EEVGEFDGYTASFDTGSIPG----------RNGVAILTKSPPTAVRTWVTDPPKARGLRE 95

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQA 188
                  + V+++ + + V  ++L                        +    + LS  A
Sbjct: 96  YASHGRYIEVDLSDEPVTVACLYLPKGGLPADLQRPGNIREKPDGGAKHLRKMTFLSGFA 155

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPND 232
           + L       + +   F++ GD N                         +   + + P  
Sbjct: 156 RELDRNRLAARRAGREFLLIGDLNIAHLEHDVTNWRPARKMEGFLPMEREWLGEQLSPRR 215

Query: 233 SLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +         R                     ID+ +                     D
Sbjct: 216 LIDVVRVLHGDRPGPLTWWSWAGESFTKDVGWRIDHQLASPGLAARARWTEV-------D 268

Query: 284 DIKSRGKRLSDHCPISIDYD 303
              S   RLSDH P+ + YD
Sbjct: 269 KEPSPDVRLSDHAPLVVGYD 288


>gi|154497021|ref|ZP_02035717.1| hypothetical protein BACCAP_01314 [Bacteroides capillosus ATCC
           29799]
 gi|150273420|gb|EDN00548.1| hypothetical protein BACCAP_01314 [Bacteroides capillosus ATCC
           29799]
          Length = 250

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L    G    ++                  LDADI  +QE       A++
Sbjct: 1   MKLISWNVNGLRACLGKGFLES---------------FAALDADIFSIQETKMQPGQAEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++++     +          +  AV  +   +           D   RA   
Sbjct: 46  -DLPGYKQYWNSAEKKGY----------SGTAVFTRLEPLNVTYGIGSEEHDREGRA--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++++ ++ +                   +    L+ ++ +  +S  
Sbjct: 92  ------ITLEFEDFYLVNCYVPN-------AQRELTRLDWRMEWEDALRAYLLE-LDSRK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                              +     +  F      +  A 
Sbjct: 138 PVIYCGDLNVAHQEIDLKNAKSNRGNAGFTDEERAKMTQLLEAGFVDSFRHLYPDKTGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ ++    +                      SDHCP+ 
Sbjct: 198 SWWSYMFHAREKNAGWRIDYFLVSKSIADKIGDSIIH-----------PEIMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDI 249


>gi|301385402|ref|ZP_07233820.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302060619|ref|ZP_07252160.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302129991|ref|ZP_07255981.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
          Length = 261

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 86/296 (29%), Gaps = 52/296 (17%)

Query: 15  PCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           P T   A   + +++ N++                        LR+  +++ ADIVFLQE
Sbjct: 10  PVTPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRSVSADIVFLQE 59

Query: 74  M--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +    ++   +V    T   +     S      + +     D     A+  K   +  ++
Sbjct: 60  VHGEHHSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHEN 119

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             +            R  +  ++++      V  + +    F            S   QQ
Sbjct: 120 LDVSIDG-----TEQRGLLHCILQVPDHG-QVHAVCVHLGLF-----------ESHRRQQ 162

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + L   + +      P ++AGDFN               +        F +   +   +
Sbjct: 163 LKLLAQLMDR-LPEGAPVIVAGDFNDWRQRAD------ALLQGTGLHEVFVQRFGAPAKS 215

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  + +D   +           S                 LSDH P++++  
Sbjct: 216 FPARWPLLRLDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVEVT 260


>gi|256828507|ref|YP_003157235.1| exodeoxyribonuclease III Xth [Desulfomicrobium baculatum DSM 4028]
 gi|256577683|gb|ACU88819.1| exodeoxyribonuclease III Xth [Desulfomicrobium baculatum DSM 4028]
          Length = 257

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ SWN+N      G                  R + +    D++ LQE+ +     +V
Sbjct: 3   LRMHSWNVNGFRAVLGKGF---------------RDWLERAAPDVLGLQEVKAEEG--QV 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++             +   ++  A   +   +  Q     G  D+  +   R
Sbjct: 46  GGDRLFDGYHCYW------NAARSKKGYSGTACYSRLEPLAVQR----GLPDTRFQGEGR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K    +++  +        +            AQ L+           
Sbjct: 96  -----VIRLEFEKFHYFNVYFPNGQMSPDRLDYKLGFYDAFLAYAQELRR--------DK 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GDFN                    L     +      +  +  F +      +A 
Sbjct: 143 PIVVCGDFNTAHREIDLKNAKANEKTSGFLPIERAWMDRFVAHGYVDTFRRCHGDVEDAY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     +                      SDHCP+ 
Sbjct: 203 SWWTYRFGARSRNVGWRIDYFFVSEELSSAVRDAWIE-----------ADVPGSDHCPVG 251

Query: 300 IDYD 303
           +  +
Sbjct: 252 LALE 255


>gi|149184981|ref|ZP_01863298.1| exonuclease III [Erythrobacter sp. SD-21]
 gi|148831092|gb|EDL49526.1| exonuclease III [Erythrobacter sp. SD-21]
          Length = 263

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 78/306 (25%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V + +WNIN                       ++ ++ K    D++ LQE+         
Sbjct: 2   VSVATWNIN----------------SVRLRMPIVERFLKETAPDVLCLQEIKCQE----- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   + + + L            +  +A   +        +      ++       
Sbjct: 41  ----HQFPYEAFKALGYEHIAVHGQKGYHGVATVSRVPIREFSRHDWQDNGEARH----- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V + +  +   I V ++++ +       +           Q+  +L+           
Sbjct: 92  --VGVELPEHDGMI-VENVYVPAG-----GDEPDREINVKFGQKLDFLERMTRWADAVDR 143

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
           P +I GDFN         +                   + +D +       +   +    
Sbjct: 144 PTLIVGDFNIAPLESDVWNHKQLLKVVSHTPIEVESLQRFMDAHGWADIGREHIKAPERY 203

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+        K     S         +     ++ SDH P
Sbjct: 204 YSWWSYRAKDWKANDRGRRLDHMWASPELAKQASGHSVH-------EYARDWEKPSDHVP 256

Query: 298 ISIDYD 303
           +  ++D
Sbjct: 257 LVTEFD 262


>gi|296535528|ref|ZP_06897711.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC
           49957]
 gi|296264141|gb|EFH10583.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC
           49957]
          Length = 264

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 71/280 (25%), Gaps = 58/280 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWNI+     +G             D   +    +    D++ +QE+ S       
Sbjct: 3   LRAMSWNIHAGIGGDG-----------RYDLGRVLGLIRRHRPDLLAVQEIDSRPCGRSA 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +T    +    +   + R    +      +  +       ++ L            R
Sbjct: 52  CAFDTLREAFGGHAIAAETMR--GGEGAYGHMLLSRWPFQEADTHDLSVEG-----REPR 104

Query: 144 RAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +A+   + + G   + V+  HL                     QQA+ +   +       
Sbjct: 105 QAIAARLRMPGGASLGVVAAHLGLRW-------------RERGQQARRMAALVRGMPG-- 149

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+ GDFN               +              +R          + +D    
Sbjct: 150 -PVVVMGDFNDWSWGGPVWRALAPLL-----------PARTRHRTFPARLPLLRLDEIFC 197

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                 +       SDH P+  + 
Sbjct: 198 RPAQL------------LGRSWVDRDAAIASDHLPVLAEL 225


>gi|284030471|ref|YP_003380402.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836]
 gi|283809764|gb|ADB31603.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836]
          Length = 286

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 70/300 (23%), Gaps = 69/300 (23%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
            +WN+N                        L  +      D+V LQE        K+   
Sbjct: 2   ATWNVN----------------SVKQRMPRLLDWLDERAPDVVCLQE-------TKLADD 38

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
               +  +      +            +A+  K       +   +     F     R   
Sbjct: 39  AFSSLLGAELTARGYETALYGEVQWNGVAILSKVGLDDVVTG--VANAPGFPNPEARAVA 96

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
                     I +  +++ +    DS    Y  +          L+D +          +
Sbjct: 97  ATC-----GGIRIHSLYVPNGRVPDSEHYHYKLA------WLAALRDVVAGGPAEQ---I 142

Query: 207 IAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANKNLR 252
           + GD N         D               + +       L    +++           
Sbjct: 143 VCGDMNIAPTDADVFDPAAFQGSTHVTAPERQALAELMATGLHDVVRDRWPTERVFSYWD 202

Query: 253 NK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +         + ID  +      + +            D    +G   SDH P+ +D D
Sbjct: 203 YRAGMFHQDLGMRIDLTLASDPVAERVKAAWI-------DRKARKGTGPSDHAPVIVDLD 255


>gi|254260300|ref|ZP_04951354.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710a]
 gi|254218989|gb|EET08373.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 305

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 85/309 (27%), Gaps = 52/309 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM------- 74
            +RL+SWN+    +  G           T D       A+ L D D++  QE+       
Sbjct: 19  TMRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHAL 67

Query: 75  ---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
               S +  A++         +    +                A+  +        + L 
Sbjct: 68  PGGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALP 127

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               + + +  R A+E+ +      + V+  HL+ +            +   L ++A   
Sbjct: 128 WPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAH 185

Query: 192 KDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF----- 237
                  +    PF         ++ GDFN                D    +  +     
Sbjct: 186 ARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHP 245

Query: 238 ---PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P       +  +     +  D+  +     + L +                  R SD
Sbjct: 246 GKTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASD 294

Query: 295 HCPISIDYD 303
           H PI ++  
Sbjct: 295 HQPIVLELS 303


>gi|226359829|ref|YP_002777607.1| exodeoxyribonuclease [Rhodococcus opacus B4]
 gi|226238314|dbj|BAH48662.1| putative exodeoxyribonuclease [Rhodococcus opacus B4]
          Length = 304

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 86/327 (26%), Gaps = 69/327 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN +   +                    ++  +   D+V LQE+ +  A    
Sbjct: 1   MRIATFNINGIRAAQRRGFE---------------EWLGDRAPDVVSLQEVRARAAAIPS 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN- 142
                + + Y        +        H  +AVR  +   L Q+      +         
Sbjct: 46  GVFGRYHLAYDEGEFAGRNGVAILTR-HAPLAVRTWSGTALVQAPGETHLERVELDPQPL 104

Query: 143 --------RRAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCS 182
                        + V++    I V+ ++L                        Y     
Sbjct: 105 ARGLGEFANHGRYIEVDLADAPITVVSMYLPKGGLPAHLQKPGRMRDAPDGGARYDRKMR 164

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWK 226
            LS  A+ L       +      ++ GD N                         + F  
Sbjct: 165 FLSAFARQLTRSRRTARARGRELLLMGDLNIAHTRHDVRNWRRSNQAEGYLPEEREWFDS 224

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSE 277
            + P   +    +                          IDY +   +  +  +      
Sbjct: 225 IVSPRTLVDVVRRHHPGVDGPYSWWSWLGQSFVNDVGWRIDYHLATPHLARAAVTAG--- 281

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
                D   +  +R+SDH P+ +DYDF
Sbjct: 282 ----TDRDPAADRRMSDHAPVVVDYDF 304


>gi|153812982|ref|ZP_01965650.1| hypothetical protein RUMOBE_03389 [Ruminococcus obeum ATCC 29174]
 gi|149830929|gb|EDM86019.1| hypothetical protein RUMOBE_03389 [Ruminococcus obeum ATCC 29174]
          Length = 252

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                           + LDADI  LQE        ++
Sbjct: 1   MKCISWNVNGIRACITKGFEDR---------------FRELDADIFCLQETKCQQGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +N   ++  AV  K   +  ++   +   D   R    
Sbjct: 46  -ELPGYHQYWN----------YANRRGYSGTAVFTKKEPISVKNGIGIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  K+ + + ++  +                        L++          
Sbjct: 91  -----VITLEFKEFYFVTVYTPNSQSELRRLEYRMEWERDFLAYLLKLQE--------SK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  +  +  +  F      +    
Sbjct: 138 PVICCGDLNVAHEEIDLKNPKTNRKNAGFTDEERACFTKVLESGFIDTFRYFYPDKEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+   +  + L   +    +             SDHCPI 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFITSPSLKEKLQGAAIHTEI-----------MGSDHCPIE 246

Query: 300 IDYD 303
           +D D
Sbjct: 247 LDID 250


>gi|282880539|ref|ZP_06289246.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281305642|gb|EFA97695.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 361

 Score = 86.5 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 93/307 (30%), Gaps = 71/307 (23%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    ++++S+N+   +  E                  +  Y +  +ADIV LQE  + 
Sbjct: 95  EAPPHAIKVLSYNVWYFAGWEDKGKANP-----------ILTYLRAQNADIVCLQEAETT 143

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +        I+   +  +     D        +A+  K   + +++       +  
Sbjct: 144 EVGKERIEAALNPIYSFHDFSLTEKGSD-------RMAIYSKFPILKKEAIHYPSEGNHS 196

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKS------------------------FCFLDSL 173
           +           ++I G  + V++ HL+S                             SL
Sbjct: 197 TAFF--------LDIKGDTVIVINNHLESIGLTEEDKDSFKGMVKGELETDSIKIGSKSL 248

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
            +  + +  + + QA+ +  +I Q ++     ++ GDFN   N         K +     
Sbjct: 249 YHKLANATKIRAPQAKAVAQYIEQHQDKT--IILCGDFNDGPNS-FARRTIAKHLRD--- 302

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              + +  +    +       + ID  +  +N   +                     + S
Sbjct: 303 --CYIETGNGPGISYHLGGFYVRIDQLMCSKNLKPY-------------HCQVDNKIKTS 347

Query: 294 DHCPISI 300
           DH PI  
Sbjct: 348 DHYPIYC 354


>gi|294851237|ref|ZP_06791910.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026]
 gi|294819826|gb|EFG36825.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026]
          Length = 268

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       L+ Q+ ++   D++ LQE         +
Sbjct: 3   FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                S    +  +A   +      +        D        
Sbjct: 44  FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+   
Sbjct: 93  --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEKMRAIIADRKD-GC 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N     N + ++    K +                            +    
Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    +                    R SDH P
Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDHVP 260

Query: 298 ISIDYD 303
           +   +D
Sbjct: 261 VIATFD 266


>gi|295835706|ref|ZP_06822639.1| exodeoxyribonuclease III [Streptomyces sp. SPB74]
 gi|295825643|gb|EDY45706.2| exodeoxyribonuclease III [Streptomyces sp. SPB74]
          Length = 262

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 74/305 (24%), Gaps = 70/305 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ +WN+N                  T+    L  + ++   D++ +QE  +      
Sbjct: 3   DMRIATWNVN----------------SITARLPRLLAWLESSGTDVLCVQETKTTAE--- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                         R   +    +       +AV  +       S  L G          
Sbjct: 44  -------GFPTEALREAGYESAVNATGRWNGVAVISRAGLDDVVSG-LPGQPAYDGVMEP 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +      + V  +++ +   +      Y        +  + L+  +       
Sbjct: 96  RA-----LGATCGPVRVWSVYVPNGREVGHPHYAYK------LEWLEALRTAVADDAAGA 144

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
            PF + GD+N         D                    +         P+        
Sbjct: 145 RPFAVLGDYNVAPGDEDVYDPAVFEGLTHVTPPEREALAKLRATGLGDLVPRPLKYD-RP 203

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID    +                   D  + +GK  SDH P+
Sbjct: 204 YTYWDYRQLAFPKNRGMRIDLVYANAAFRTAAKGAYV-------DREERKGKGASDHAPV 256

Query: 299 SIDYD 303
            +D +
Sbjct: 257 VVDLE 261


>gi|115396906|ref|XP_001214092.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114193661|gb|EAU35361.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 426

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 90/305 (29%), Gaps = 31/305 (10%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M   + LA +    P  A+ + +  ++S+N+  L E    +         +     +   
Sbjct: 1   MRAFWYLAGI---SPALAASSGQFNVLSFNVAGLPEIFNSNEVPGDKSTNS---EQIGTK 54

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 D++ +QE  +Y+A         +       R          + ++T        
Sbjct: 55  FAEYGYDVIHVQEDFNYHA-------YIYKTDNHPYRTATSGGAGIGSGLNT--LANYPW 105

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSP 179
           V   +  +              +    + V  + G  +   ++H  +    D +    + 
Sbjct: 106 VDFERVKWATCSDASGADCLTPKGFTAMRVRFDEGFYVDFYNLHADAGSETDDVSARSAN 165

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                    Q L D+I     +  P ++ GD N +    G N   ++T +   +      
Sbjct: 166 --------LQQLADYIDTN-SAGNPVMVFGDTNARYTSAGENIRVFETQEGMSNPAPTRG 216

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            +D      +    L    +         + S G  LSDH PIS
Sbjct: 217 SARIPRRTRT----CETVDKIFYRGSRAVDLKAVYWD--YVGTKFLSSNGTILSDHNPIS 270

Query: 300 IDYDF 304
            +  +
Sbjct: 271 SNITW 275


>gi|3859723|emb|CAA21997.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Candida albicans]
          Length = 589

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 88/327 (26%), Gaps = 42/327 (12%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +    ++S+N      +  +      +   +      LL +   N + DIV +QE+ 
Sbjct: 252 PESSDNFTVLSYNTLCQHYATPKMYKFTPSWALQWDYRKNLLEKEVLNYNTDIVCMQEVE 311

Query: 76  SYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--- 128
           +        P  T       F+S  R    S+ DS      A   +     ++ +     
Sbjct: 312 TKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKKVDGCATFFKNDKFSLVHKQNFEY 371

Query: 129 --------PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLEN 175
                        KD F+R  N+        L  + +G+KI V++ HL     F D    
Sbjct: 372 NSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKESGEKIAVVNTHLHWDPAFNDVKAL 431

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDFWKTID 229
                   L    +  +   + +       V+ GDFN   +               + ++
Sbjct: 432 QVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFNSVKDSAVYQLFSTGASKGHEDMN 491

Query: 230 PNDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESF 275
             D                            N        IDY            +    
Sbjct: 492 GRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAFTDNIDYIWYSTPTLQVKGLLGRV 551

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            E   +           SDH PI   +
Sbjct: 552 DEEYTSHSIGFPDANFPSDHVPILAKF 578


>gi|325860217|ref|ZP_08173342.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
 gi|325482304|gb|EGC85312.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
          Length = 366

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 81/302 (26%), Gaps = 69/302 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAV 80
             ++++S+N+   S        +N           +  Y     ADIV LQE   S    
Sbjct: 99  GSIKVLSYNVFMFSIWSEPGGEQNP----------IVDYILKSKADIVCLQEAQASMEGT 148

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +++P       Y    +      D        + +  +   + Q S P     +     
Sbjct: 149 DRIYPALKKHYPYFRLMVKKKPGADH-------MVLLSRYPVLWQDSIPYGSNSNQSVAY 201

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS------------------ 182
                    V+I G K  V++ HL+S       +  +                       
Sbjct: 202 M--------VDIKGTKTLVVNNHLESNGLSTDDKEEFKTLVKGNMGTGEAKDESFHLLRK 253

Query: 183 ------LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                   + QA+ +  ++ +  +  VP ++ GDFN       +           +    
Sbjct: 254 LGSVSVRRAPQAEAVARYVRKYLDRKVPVILCGDFNDSPLSYTHRTIVR------ELTDC 307

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +    +    +         ID+     +                           SDH 
Sbjct: 308 YVASGNGPGISYHKSGMYFRIDHIFCSDDF----EPYGAKVDNSVT---------ASDHY 354

Query: 297 PI 298
           PI
Sbjct: 355 PI 356


>gi|86140867|ref|ZP_01059426.1| hypothetical protein MED217_16985 [Leeuwenhoekiella blandensis
           MED217]
 gi|85832809|gb|EAQ51258.1| hypothetical protein MED217_16985 [Leeuwenhoekiella blandensis
           MED217]
          Length = 315

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 87/320 (27%), Gaps = 49/320 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSV-----------KRTTSDYTLLRQYAKNLD---- 65
           + K+ L  +N+  L +        ++            +R T     L +    +     
Sbjct: 3   STKLTLAFYNLENLFDTLKDPNILDADFTPHGGLKWNHERYTQKLNGLAKTIAQVGKAET 62

Query: 66  ---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNV 121
                ++ + E+ +   +  +                N         I TA+   + +  
Sbjct: 63  GQAPALIGVAEVENKKVLNDLLQTEALHTMNYDFIHHNSPDE---RGIDTALLYDKNRFE 119

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            +  +SY L        R   R  + +  ++ G  ++VL  H  S     ++      + 
Sbjct: 120 VLESRSYSLHLQTAQGVRDFTRDILYVEGKLAGVPVFVLVNHWPSRGEGVAISEPKRIAA 179

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           +  +   + +   I  + +     +I GDFN     +   D    T   N  +    +  
Sbjct: 180 AERN---REIIQDIQAR-DPEARILIMGDFNDDPQSIAVRDHLVSTDFYNPMVFLLTRYA 235

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNE 282
            S  +           D  ++  N  K                         +       
Sbjct: 236 GSLNHRGDWYLF----DQIILSPNWMKAYDNPLEYEKSAIYNPEYLKEQEGKYRGNPLRT 291

Query: 283 DDIKSRGKRLSDHCPISIDY 302
                    LSDH P+   +
Sbjct: 292 YAGDKYLGGLSDHFPVYTIF 311


>gi|90577495|ref|ZP_01233306.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           angustum S14]
 gi|90440581|gb|EAS65761.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           angustum S14]
          Length = 352

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 106/343 (30%), Gaps = 55/343 (16%)

Query: 14  VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIVF 70
            P       ++++ S+N+ N L+       ++N  S ++       L    +    DI+ 
Sbjct: 9   FPLVPIAQSEIKIASFNLLNYLAPPNAYYDFENIYSYEQWHKKQHWLTSILEAQQPDIIG 68

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
            QE+ S + +  +     +  +++                  AIA +     V+     +
Sbjct: 69  FQEVFSADDLQSLLRDIGYP-YFAVVDEPIVEGDFIYRSPVVAIASKFPITEVIAVEADI 127

Query: 131 LGAKDSFS--RAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
             A+       + +R+ +   V+I        +V  +  K   F D L  T + S S L+
Sbjct: 128 EAAQLMGWAEFSFSRKPLRATVDIPHIGATDCYVTHLKSKRSLFDDPLPETITKSGSALA 187

Query: 186 QQA-QWLKDW-----------------ITQKKESLVPFVIAGDFNRKINYLGNNDD---- 223
               Q L +W                 + +++++  P V+ GD+N  I+     +     
Sbjct: 188 SFLGQRLGNWGSSMLRGTEAALLQLAMVKRREQTSNPMVLCGDYNDVISSSCLEELTASR 247

Query: 224 -----------FWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAY 267
                              D    + +             +        +DY ++ Q   
Sbjct: 248 VYGMSESDTERLINFYCLYDGWQLYTQVNPQDEEAIRPATHYFNGKGSVLDYILLSQEFN 307

Query: 268 KFLIQESFSEILYNEDD------IKSRGKRLSDHC-PISIDYD 303
              +   F    Y+ +D              +DH  PI +   
Sbjct: 308 ASYLGSLFEVSHYHTEDKHLVNSSFDIDGYSTDHAIPI-VTLS 349


>gi|256158498|ref|ZP_05456396.1| exodeoxyribonuclease III [Brucella ceti M490/95/1]
 gi|256253917|ref|ZP_05459453.1| exodeoxyribonuclease III [Brucella ceti B1/94]
 gi|261221054|ref|ZP_05935335.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94]
 gi|265997015|ref|ZP_06109572.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1]
 gi|260919638|gb|EEX86291.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94]
 gi|262551483|gb|EEZ07473.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1]
          Length = 268

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 78/306 (25%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       L+ Q+ ++   D++ LQE         +
Sbjct: 3   FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                S    +  +A   +      +        D        
Sbjct: 44  FPAKGFRAL------GYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMDDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+   
Sbjct: 93  --LSAVVEAGDRKLRIHNFYVPAG--GDEPDPEINPKFAHKLAFLEEMRAIIADRKD-GC 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N     N + ++    K +                            +    
Sbjct: 148 SSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQKI 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                         R SDH P
Sbjct: 208 YTWWSYRAKDWDAADRGRRLDHVWGSADLES-------HIKGLQVLRDARGWDRPSDHVP 260

Query: 298 ISIDYD 303
           +   +D
Sbjct: 261 VIATFD 266


>gi|189184108|ref|YP_001937893.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
 gi|189180879|dbj|BAG40659.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
          Length = 264

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 80/305 (26%), Gaps = 68/305 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+++++WNIN                   +    L Q   +   DI+ LQE+   +    
Sbjct: 4   KLKILTWNIN----------------SIRARAYQLNQLISDTQPDIILLQEIKCES---- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    F        ++   +    +  +A+  K      +   L       +R   
Sbjct: 44  -----HNFPFQEINESHKYNFSINGQKSYNGVAILSKFPLEDIKFSFLGNPCPDQARF-- 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +E         + V+ I++ +   ++S          +          ++   K   
Sbjct: 97  ---IEANCLTEVGYVKVISIYVPNGGEVNS------DKFQIKLLFIDEFIKYLHSSKNLG 147

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GDFN                            + +  ++ +  +      +   
Sbjct: 148 ESIILGGDFNVAPYDNDVYSAIELQNTTCFTLPEKQYIRKLINHNFIDIYRLFHQRQKK- 206

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +         + IDY +   +                 D       R SDH P+
Sbjct: 207 FTWWDYRAGAFERNLGMRIDYILCTISIALKATDCYI-------DYHTRNNHRASDHAPV 259

Query: 299 SIDYD 303
              ++
Sbjct: 260 IASFE 264


>gi|256546090|ref|ZP_05473443.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398207|gb|EEU11831.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus
           vaginalis ATCC 51170]
          Length = 348

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 98/321 (30%), Gaps = 60/321 (18%)

Query: 18  ASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             + +   +++WNI               G  ++  +          +   +K +++DI 
Sbjct: 49  PEIGKSYTIMTWNIGYGGLDKDTDFFMDGGKMVFPINKSHVEKSINHIINSSKKINSDIK 108

Query: 70  FLQEMG-----------SYNAVAKVFPK----NTWCIFYSTERLINHSKRDSNNDIHTAI 114
           F QE+                  K+         +   +    +    K +S     T  
Sbjct: 109 FFQEVDINSKRTYHINEYEKIRKKLLGNTTFALNFKAAFIPYPIPPMGKVESGIMTQTNF 168

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            ++K      +  +       +  RA N     + ++ + KK+ ++++HL ++   ++  
Sbjct: 169 KIQKSKRYQQEIPHKFPSRLVNLKRAFN--PSYIDIKNSDKKLVIVNVHLDAYEKGNNG- 225

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-------------NN 221
                       Q + + +++ ++ +     ++ GDFN+++                   
Sbjct: 226 ---------RIAQTKEIINFVNKEYKKGNYVIVGGDFNQELTGNYKELPEGIWNPKILPK 276

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
           +   + I             + +    K       ID F+   N                
Sbjct: 277 ELLTENIKLYYDKNGETSVVNDKPYTGK-DAYLSTIDGFMATDNIKIK-----------T 324

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
               +    + SDH P+ +++
Sbjct: 325 IKTQEKENFQYSDHNPVVMEF 345


>gi|237738747|ref|ZP_04569228.1| exodeoxyribonuclease III [Fusobacterium sp. 2_1_31]
 gi|294781992|ref|ZP_06747324.1| exodeoxyribonuclease III [Fusobacterium sp. 1_1_41FAA]
 gi|229423850|gb|EEO38897.1| exodeoxyribonuclease III [Fusobacterium sp. 2_1_31]
 gi|294481803|gb|EFG29572.1| exodeoxyribonuclease III [Fusobacterium sp. 1_1_41FAA]
          Length = 253

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                 +       Y    +ADI  LQE    +A    
Sbjct: 1   MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELKGYHQYWNYAEKKGY----------SGTAIFTKEEPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                         + ++   ++   
Sbjct: 91  -----VITLEFEKFYMITVYTPN-------SKDELLRLDYRMVWEDEFRKYLKNLEKKK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +  +  +  F        +A 
Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLESGFIDTFRYFYPDLEHAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +   K+L+                     SDHCP+ 
Sbjct: 198 SWWSYRANARKNNTGWRIDYFVVSKALEKYLVDAEIHAQT-----------EGSDHCPVV 246

Query: 300 IDYDF 304
           +  DF
Sbjct: 247 LFLDF 251


>gi|333030586|ref|ZP_08458647.1| exodeoxyribonuclease III Xth [Bacteroides coprosuis DSM 18011]
 gi|332741183|gb|EGJ71665.1| exodeoxyribonuclease III Xth [Bacteroides coprosuis DSM 18011]
          Length = 253

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 81/297 (27%), Gaps = 73/297 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V++N+N L       L                ++    + D+V +QE          
Sbjct: 1   MKIVTYNVNGLRAATTKGLP---------------EWLAETNPDVVCIQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +                +    ++ +A+  K        +   G          R
Sbjct: 38  LQPDQYPAEPYEALGYKSYLYSAQKKGYSGVAILTKVEP----DHVEYGMGIEAYDNEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D+ ++          Q     ++++ + +++  
Sbjct: 94  F-----IRADFGDLSVVSVYHPSGTSGDARQD-------FKMQWLSDFQNYVLELRKTRP 141

Query: 204 PFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  +D                W T   +       +   +      
Sbjct: 142 NLILCGDYNICHEEIDIHDPKGNAKNSGFLPEERAWMTSFLDTGFSDSFRRFHAETQKYT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +           IDY ++   A   ++                     SDHCP
Sbjct: 202 WWSYRFKARSKNKGWRIDYCMVSDEAKDRVVDAWI-----------DNDAVHSDHCP 247


>gi|228910912|ref|ZP_04074721.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           200]
 gi|228848863|gb|EEM93708.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           200]
          Length = 352

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 109/327 (33%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE+            +  + K  P         +   +    + N             +
Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N GK + ++++HL +     
Sbjct: 165 STFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA----- 219

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK+++ +  E+    ++ GD+N+ ++    +D  +    P 
Sbjct: 220 -----YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPE 274

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349


>gi|21233468|ref|NP_639385.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770432|ref|YP_245194.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188993642|ref|YP_001905652.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. B100]
 gi|21115315|gb|AAM43267.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575764|gb|AAY51174.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167735402|emb|CAP53617.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris]
          Length = 259

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+  +   D+V +QE  +  +    
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLADFAPDVVGIQETKLEDHKFPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +   +                 +  +A+  ++  +  Q          F    
Sbjct: 45  AALAALGYRSVFC------------GQKTYNGVAILSRSPALEVQ-----MGIPGFDDVQ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +  + + DWI Q+ + 
Sbjct: 88  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLEAVHDWIAQELQR 136

Query: 202 LVPFVIAGDFNRKINYLGNND---DFWKTIDPND------------SLIRFPKEKDSRCN 246
               V+ GDFN   +     +        I  +              L    +       
Sbjct: 137 HPQLVVLGDFNIAPDARDVYEPEVWSDNHILTSTAERGALHKLLALGLHDAFRLHHDDAG 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        ++          D      +R SDH P
Sbjct: 197 HFSWWDYRQAAYRRNLGLRIDLTLVSDALRARAVEAGI-------DREPRTWERPSDHAP 249

Query: 298 ISIDY 302
             +  
Sbjct: 250 AWVRL 254


>gi|223982521|ref|ZP_03632759.1| hypothetical protein HOLDEFILI_00033 [Holdemania filiformis DSM
           12042]
 gi|223965496|gb|EEF69770.1| hypothetical protein HOLDEFILI_00033 [Holdemania filiformis DSM
           12042]
          Length = 1904

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 94/321 (29%), Gaps = 70/321 (21%)

Query: 2   IRKYVLALVFF--------------LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47
           ++K +  L                 L   +      +R+ +WNI                
Sbjct: 1   MKKLLSFLAALVTALTVIVPSQATPLFAQSPEAPVTLRVGTWNI---------------A 45

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKR 104
                D   +       + +++ +QE+    + N +  +    +  + ++          
Sbjct: 46  ANKHPDLAAMSNVIAENNIEVLAVQEVDMFNNRNNIDMMAGLTSTKLVHTDFAKFR---- 101

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
                    I    +   +   + PL    +++     + A  ++VE +GK+I + ++HL
Sbjct: 102 -DYEGGEFGIGFVSQYPILKSSASPL----ETYELEATKVAQRIVVEKDGKQIALYNVHL 156

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
            +             +  L   Q   L + I    + +   VI GDFN   +    +   
Sbjct: 157 SAQTP------KQMTARELRQVQMAQLAEQIAN--DPVEYKVIMGDFNTDQDTYEFSRLL 208

Query: 225 --WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
             +   + +D         D                          F +    +      
Sbjct: 209 DYFNMANGHDDQWLRTYWPDDD-------------------PAMKVFAVDNILATKNIEI 249

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
           D+IK    +LSDH  ++ D  
Sbjct: 250 DNIKVVNNKLSDHYMLTADLT 270


>gi|167762675|ref|ZP_02434802.1| hypothetical protein BACSTE_01033 [Bacteroides stercoris ATCC
           43183]
 gi|167699015|gb|EDS15594.1| hypothetical protein BACSTE_01033 [Bacteroides stercoris ATCC
           43183]
          Length = 370

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 91/317 (28%), Gaps = 69/317 (21%)

Query: 14  VPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           VP TA    +       + + ++N++               + T      + +Y +    
Sbjct: 97  VPATAPAPNRQGKNSGYLTVATYNVHNFG-----------NEITGYSCKQIAKYMQQQHV 145

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++  QE          F +N      S  R ++H +        +   +R      +  
Sbjct: 146 DVLCFQE----------FGENKHFTADSLRRALSHWQYAIIPADDS---IRGILPIAVFS 192

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------NTYS 178
            YPL+G +          ++   + +N   I +L+ HL++     + +        +   
Sbjct: 193 RYPLIGGRFITYPHSANCSMLCDIILNTDTIRLLNNHLQTTSVSQNRKKWERELAADNTR 252

Query: 179 PSCSLLSQQAQWLKD-----------WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                +   A+ L +                  S  P ++ GDFN   +    +  F ++
Sbjct: 253 REAQAVQDAAETLHENFVKRAFQTDSICQLATASPHPVLVCGDFNSLPSSYTYHR-FSES 311

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +        F           +  +  + IDY                       D    
Sbjct: 312 LKDG-----FKTGGHGYMYTYRYGKRMLRIDYAFHSPELEC-------------TDYYSP 353

Query: 288 RGKRLSDHCPISIDYDF 304
                SDH P+     +
Sbjct: 354 NLDLCSDHNPVIFTVKY 370


>gi|83747941|ref|ZP_00944972.1| dioxygenase [Ralstonia solanacearum UW551]
 gi|207743451|ref|YP_002259843.1| metal-dependent hydrolase protein [Ralstonia solanacearum IPO1609]
 gi|83725359|gb|EAP72506.1| dioxygenase [Ralstonia solanacearum UW551]
 gi|206594848|emb|CAQ61775.1| metal-dependent hydrolase protein [Ralstonia solanacearum IPO1609]
          Length = 289

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 84/305 (27%), Gaps = 50/305 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84
           +++WNI      +G             D   +   A  +   DI+ LQE+ S        
Sbjct: 5   ILTWNIQWGRGADG-----------RVDLPRMLAEAHAMGPFDILCLQEITSGFGHLPGQ 53

Query: 85  PKNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           P +      +       +        + +         A+  +   +    + L    D+
Sbjct: 54  PGDDQWRELAGTLGPAFTLIDGIALERHEGTRIQRFGNAIVTRLPVLHVARHALPCPADT 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R A+E  V+     + V+  HL+ +     +    +     +    +       
Sbjct: 114 SP-TMPRMAIEATVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRAAHPPTL 172

Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             + +  PF         VI GDFN K +                +L    +        
Sbjct: 173 GPEPADGPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGTAPQ 232

Query: 248 NKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                              D+ ++ +     + +   + +            + SDH P+
Sbjct: 233 PPTFGVHDRTGWTEPAYACDFMLVSEPLKTRVARVEVNSVT-----------QASDHQPM 281

Query: 299 SIDYD 303
            ++ +
Sbjct: 282 LLELN 286


>gi|257883889|ref|ZP_05663542.1| AP endonuclease [Enterococcus faecium 1,231,501]
 gi|257819727|gb|EEV46875.1| AP endonuclease [Enterococcus faecium 1,231,501]
          Length = 250

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +    LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D+  R    
Sbjct: 45  LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +++  +  +        +             + L        +   
Sbjct: 92  ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD N                   +          +  N  +  F     ++    
Sbjct: 138 PVIICGDLNVAHQTIDLKNWKTNQKNAGFTPEERAALSRLLDNGFVDTFRYFYPTQEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  ++    L                      SDHCP+ 
Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLASKDLEPRLADAKIHT-----------DIMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|229002991|ref|ZP_04160856.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
 gi|228758256|gb|EEM07438.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
          Length = 354

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 109/318 (34%), Gaps = 64/318 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            ++ +  ++NI               G     +S ++T  + + +  + +  D+D + +Q
Sbjct: 54  GEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNISNMLSFLQKEDSDFILVQ 113

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-------------KK 119
           EM   +   + F  N +  F    +    +   + N     + ++              K
Sbjct: 114 EMDEKSL--RSFDVNQYKAFQDGLKDHASTFGYNFNAQWVPVPIKKPHGYTNSGLGSFSK 171

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176
                   Y L G +    +     R  VE  V + NGK + ++++HL ++    +    
Sbjct: 172 YKVEEVTRYQLPGREMWLRQLFELDRAIVEHKVPVDNGKYLRMVNVHLSAYDKGGN---- 227

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                 +  QQ ++LK+++ +  ++    V+ GD+N+ ++ +   D  +K   P   +  
Sbjct: 228 ------IRKQQVEFLKEYMNRHYKNGDYLVLGGDWNQLLSDVQLKDPKFKEEWPEWLVQL 281

Query: 237 FPKEKDSRCNANKNL----------------RNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 282 PEDFTDGGFQWAVDDTVWTVRDNVKSYVEDENFVTIIDGFLVSPN--VEIVSVQGHDLKF 339

Query: 281 NEDDIKSRGKRLSDHCPI 298
                       SDH P+
Sbjct: 340 EN----------SDHNPV 347


>gi|229009363|ref|ZP_04166629.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
 gi|228751907|gb|EEM01668.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
          Length = 354

 Score = 86.5 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 109/318 (34%), Gaps = 64/318 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            ++ +  ++NI               G     +S ++T  + + +  + +  D+D + +Q
Sbjct: 54  GEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNISNMLSFLQKEDSDFILVQ 113

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-------------KK 119
           EM   +   + F  N +  F    +    +   + N     + ++              K
Sbjct: 114 EMDEKSL--RSFDVNQYKAFQDGLKDHASTFGYNFNAQWVPVPIKKPHGYTNSGLGSFSK 171

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176
                   Y L G +    +     R  VE  V + NGK + ++++HL ++    +    
Sbjct: 172 YKVEEVTRYQLPGREMWLRQLFELDRAIVEHKVPVDNGKYLRMVNVHLSAYDKGGN---- 227

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                 +  QQ ++LK+++ +  ++    V+ GD+N+ ++ +   D  +K   P   +  
Sbjct: 228 ------IRKQQVEFLKEYMNRHYKNGDYLVLGGDWNQLLSDVQLKDPKFKEEWPEWLVQL 281

Query: 237 FPKEKDSRCNANKNL----------------RNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 282 PEDFTDGGFQWAVDDTVWTVRDNVKSYVEDENFVTIIDGFLVSPN--VEIVSVQGHDLKF 339

Query: 281 NEDDIKSRGKRLSDHCPI 298
                       SDH P+
Sbjct: 340 EN----------SDHNPV 347


>gi|311064847|ref|YP_003971573.1| calcineurin-like phosphoesterase [Bifidobacterium bifidum PRL2010]
 gi|310867167|gb|ADP36536.1| Calcineurin-like phosphoesterase [Bifidobacterium bifidum PRL2010]
          Length = 1597

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 54/373 (14%), Positives = 96/373 (25%), Gaps = 88/373 (23%)

Query: 14  VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSD------------------- 53
            P  A+V   +RL ++N+ N  S     +    S   T  D                   
Sbjct: 508 TPDLAAVGGDIRLATFNVLNYFSTTADKTGCSTSNAYTDRDGNPVTAKNCDVRGAWDKAN 567

Query: 54  ----YTLLRQYAKNLDADIVFLQEMGSY------------------------NAVAKVFP 85
                  + +   NL AD+V L+E+ +                         +A+ +   
Sbjct: 568 MERQRAKIVKAINNLGADVVSLEEIENSAKAASSVPASFKGERRDYALATLVDALNEQAG 627

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-------RVLQQSYPLLGAKDSFS 138
           + TW    S + + +    D    I TA   +   V        +               
Sbjct: 628 EGTWAYVPSPQTVPDLDVEDV---IRTAFIYKPTKVATVGATRILTDSDAFNGKNGYEHG 684

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193
           R  + +A +     +     V+  H KS     +  N         +      QA  L  
Sbjct: 685 RQPDAQAFKAKGAADSDAFLVVANHFKSKGSASNALNQDPGDGSGNADYTRQAQADALLA 744

Query: 194 WITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-- 249
           +  + K    L    + GDFN                       +  ++      A    
Sbjct: 745 FTDEVKSDLKLEKVFLVGDFNAYYAEKPIQKIVAAGYTD--LSEQVSEKTGKYTYAYTVK 802

Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-------------- 290
                       +D+   ++ A + +       I   E       +              
Sbjct: 803 DESGNTNGGVGSLDHIFANEAAMRSVTGADIWNINSVESVALEYSRYNYNAKNLYQADQF 862

Query: 291 RLSDHCPISIDYD 303
           R SDH P+ I   
Sbjct: 863 RASDHDPVIIGIS 875


>gi|255006791|ref|ZP_05145392.2| phospholipase C [Staphylococcus aureus subsp. aureus Mu50-omega]
          Length = 274

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 83/278 (29%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
           + N  +   +D      Y K  + D+V   E     A  K+         Y T       
Sbjct: 2   YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 60  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K + V+  H +S    DS     +    + ++Q + + D++ +          I GD N 
Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGN-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D  K ++ ND L                  N        +DY   D++  +
Sbjct: 175 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271


>gi|226940627|ref|YP_002795701.1| Endonuclease/exonuclease/phosphatase [Laribacter hongkongensis
           HLHK9]
 gi|226715554|gb|ACO74692.1| Endonuclease/exonuclease/phosphatase [Laribacter hongkongensis
           HLHK9]
          Length = 237

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 75/263 (28%), Gaps = 38/263 (14%)

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------RLI 99
           S      +   +    + LDAD++FLQE+   +++          I           R  
Sbjct: 2   SPLNRKVNLVGIANELEGLDADLLFLQEVQGRHSLRARHKAGYLDIPQHDYIAGRLDRHA 61

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
            +         H   A+  +       +  L     S +R  +R  +   +++ G    V
Sbjct: 62  VYGLNAGYGYGHHGNAILTRFPIRQWCNLDL-----SVNRLESRGVLHCDIKLPGWPCEV 116

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
             + +    F                +Q + L  +I +        ++AGDFN       
Sbjct: 117 TALCIHLNLFGHD-----------RRKQMEQLSRYIERAVPRGNGLILAGDFND-----W 160

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                 +  D                 +       + +D   +              +I+
Sbjct: 161 RRRANHEFADELGLQEVHEAVHGRHGKSFPARLPILTLDRIYVRG-----------LQIV 209

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
             E    +    LSDH P+S + 
Sbjct: 210 GAEVLRGAPWATLSDHLPLSAEL 232


>gi|224283762|ref|ZP_03647084.1| 5'-Nucleotidase domain protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313140916|ref|ZP_07803109.1| 5'-Nucleotidase domain-containing protein [Bifidobacterium bifidum
           NCIMB 41171]
 gi|313133426|gb|EFR51043.1| 5'-Nucleotidase domain-containing protein [Bifidobacterium bifidum
           NCIMB 41171]
          Length = 1597

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 54/373 (14%), Positives = 96/373 (25%), Gaps = 88/373 (23%)

Query: 14  VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSD------------------- 53
            P  A+V   +RL ++N+ N  S     +    S   T  D                   
Sbjct: 508 TPDLAAVGGDIRLATFNVLNYFSTTADKTGCSTSNAYTDRDGNPVTAKNCDVRGAWDKAN 567

Query: 54  ----YTLLRQYAKNLDADIVFLQEMGSY------------------------NAVAKVFP 85
                  + +   NL AD+V L+E+ +                         +A+ +   
Sbjct: 568 MERQRAKIVKAINNLGADVVSLEEIENSAKAASSVPASFKGERRDYALATLVDALNEQAG 627

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-------RVLQQSYPLLGAKDSFS 138
           + TW    S + + +    D    I TA   +   V        +               
Sbjct: 628 EGTWAYVPSPQTVPDLDVEDV---IRTAFIYKPTKVATVGATRILTDSDAFNGKNGYEHG 684

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193
           R  + +A +     +     V+  H KS     +  N         +      QA  L  
Sbjct: 685 RQPDAQAFKAKGAADSDAFLVVANHFKSKGSASNALNQDPGDGSGNADYTRQAQADALLA 744

Query: 194 WITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-- 249
           +  + K    L    + GDFN                       +  ++      A    
Sbjct: 745 FTDEVKSDLKLEKVFLVGDFNAYYAEKPIQKIVAAGYTD--LSEQVSEKTGKYTYAYTVK 802

Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-------------- 290
                       +D+   ++ A + +       I   E       +              
Sbjct: 803 DESGNTNGGVGSLDHIFANEAAMRSVTGADIWNINSVESVALEYSRYNYNAKNLYQADQF 862

Query: 291 RLSDHCPISIDYD 303
           R SDH P+ I   
Sbjct: 863 RASDHDPVIIGIS 875


>gi|68171888|ref|ZP_00545213.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|67998687|gb|EAM85414.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ehrlichia
           chaffeensis str. Sapulpa]
          Length = 281

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 87/318 (27%), Gaps = 78/318 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ +WN+N                        L  +  N   DI  LQE+   +    
Sbjct: 2   TLKIATWNVN----------------SIRKRLDHLCNWLINSAIDIALLQEIKCTDE--- 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-------------LQQSYP 129
                     +     + +            +A+  +   V              +  Y 
Sbjct: 43  -------QFPFFDVESLGYKCYVHGQKARNGVAIITRYPIVGELVTSIFSSDYKSKLCYE 95

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L      ++   +R  +E +V  +  KI +  I++ +   +DS       +         
Sbjct: 96  LSSENFIYNCDESRY-LECVVLHHNIKIRIASIYVPNGQSIDS------DAFQYKLGFFD 148

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSL 234
            L++ +    +     ++ GD+N     +   D                 +++I  N   
Sbjct: 149 QLREHVLSLLKKEEILILGGDYNVAPYPIDVYDPEVMDGKLCFHKSEREKFRSI-LNLGF 207

Query: 235 IRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
               +  +           K           ID  ++   A   L+     + L   D  
Sbjct: 208 TDSFRVLNDYEKKFSWWNYKAGAWQQNRGLRIDNLLLSPQATDKLLSCVIHDKLRGLDT- 266

Query: 286 KSRGKRLSDHCPISIDYD 303
                  SDH P+  + D
Sbjct: 267 ------PSDHAPVVCELD 278


>gi|88854941|ref|ZP_01129607.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1]
 gi|88816102|gb|EAR25958.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1]
          Length = 278

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 76/301 (25%), Gaps = 59/301 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +  + +  +    D D++ +QE+         
Sbjct: 1   MRIATWNVN----------------SVRTRVSRVVDWMLREDIDVLAMQEIKCK------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       +            +A   +                        
Sbjct: 39  ----PEQFPHDAFTDAGYEVELHGLSQWNGVAFASRLPMEDVTVGFDTQPGFGKPLDDGT 94

Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +E   + +      +  +++ +   LD+    Y      L+  A    +W+   +   
Sbjct: 95  IPIEARAIGVTVSGARLWSLYVPNGRELDNPHYPYK--LEWLANLAAQTSNWMR--ENPE 150

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P  + GDFN                  +        +   +    +             
Sbjct: 151 QPLALMGDFNIAPLDIDVWDVAAFEGKTHISEPERAAFAAFEKAGLIDALRSRGIKGYTY 210

Query: 248 NKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               R +      + ID+ +      + +   S        D  + +G   SDH P+ +D
Sbjct: 211 WDYQRLRFPRNEGMRIDFILGSPQFDELVTGASI-------DREERKGDGPSDHVPVVVD 263

Query: 302 Y 302
            
Sbjct: 264 L 264


>gi|301347815|ref|ZP_07228556.1| nuclease [Acinetobacter baumannii AB056]
          Length = 555

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 97/325 (29%), Gaps = 50/325 (15%)

Query: 21  AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSY 77
           A  +R+ S+N+ N  +   G    + +  +   D     +    K++DAD+  L E+ + 
Sbjct: 204 ANHIRVASFNVLNYDNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIANN 263

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                    +         + +      R  N+ I  AI    K V+ L ++  L     
Sbjct: 264 GYGPNSAIAHLTSALGPDWKYVIPENLDRLGNDVIAVAIIYNSKRVKPLNKAVVLDLGD- 322

Query: 136 SFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF---LDSLENTYSPSCS-----LLS 185
                 NR  +    +     K   V+  HLKS        S  +               
Sbjct: 323 -----KNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWNPTRV 377

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  W+ +          ++ GD N            ++  +    L      + +
Sbjct: 378 KAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPI--LAFEKANYKVLLNDAKVGQGA 435

Query: 244 RCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------ 289
           +  +                 +D+ + D + Y  +++     I  +E  +          
Sbjct: 436 QAYSYVFGVASDANGNGGVGNLDHAIADADLYPKVVRTFAWHINADEPMVLDYNEEYKTD 495

Query: 290 -----------KRLSDHCPISIDYD 303
                       R SDH P+ +D D
Sbjct: 496 EQKALFYGEDAYRSSDHDPVIVDLD 520


>gi|260584873|ref|ZP_05852618.1| exodeoxyribonuclease III [Granulicatella elegans ATCC 700633]
 gi|260157530|gb|EEW92601.1| exodeoxyribonuclease III [Granulicatella elegans ATCC 700633]
          Length = 253

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++L +WN+N                R+  +   L++Y      DI+ LQE       V  
Sbjct: 1   MKLTTWNVNG--------------IRSVLNKGALQEYVLEAQPDILCLQETKAQPEQVDL 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++++     +          +  A+  K   +  Q    +   D   R   
Sbjct: 47  GMEFAGYHAYWNSAVKKGY----------SGTAIFTKEEPISVQYGLGIEEHDQEGR--- 93

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++       +++ ++  +     +  +             + L++         
Sbjct: 94  ------VITAEYADYYLVTVYTPNAKRDLTRLSYRQVWEDDFLAFIKKLEE--------T 139

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +  GD N                         + +  I  N  +  F         A
Sbjct: 140 KPVIFCGDLNVAHKEIDLANPKTNTKNAGFTKEEREKFDQIVENGLVDAFRFRYPEAVGA 199

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDYFV+ +     + +                    SDHCP+
Sbjct: 200 YTWWSYMGGARARNIGWRIDYFVVSEVLTSRIQEVKIR-----------ADVTGSDHCPV 248

Query: 299 SIDY 302
            ++ 
Sbjct: 249 EMEI 252


>gi|206976682|ref|ZP_03237587.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           H3081.97]
 gi|217962556|ref|YP_002341128.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187]
 gi|206745168|gb|EDZ56570.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           H3081.97]
 gi|217063640|gb|ACJ77890.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187]
          Length = 352

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 108/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKEQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N GK + ++++HL +        
Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|315104061|gb|EFT76037.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA2]
          Length = 297

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 77/320 (24%), Gaps = 64/320 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+NIN +                        ++ +  D D++ LQE+    A   +
Sbjct: 1   MRIASFNINGIRAALKRGF---------------SEWMEARDCDVIGLQEVRCRPA--DL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSR--- 139
                     S        +        TA A VR     ++             +    
Sbjct: 44  PEGAFGDRHVSWAPGSLAGRNGLALLTRTAPAEVRSWGTHLVMTPGQAPTPAQVLTGNTN 103

Query: 140 -------AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                          + V++    + V  ++L      D                    +
Sbjct: 104 GLPTELLPFADEGRYIEVDLADTPLTVACLYLPKGATPDPANEKAIAKQDRKMAFLAGFR 163

Query: 193 DWI----TQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232
           D +     +       F++ GDFN                           F   + P+ 
Sbjct: 164 DHLVRRRQECTAQGRHFLVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDT 223

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +     +             +           IDY +         I           D
Sbjct: 224 LIDVVRAQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITSEI-------D 276

Query: 284 DIKSRGKRLSDHCPISIDYD 303
              S  +R SDH  + IDYD
Sbjct: 277 RDPSYSERTSDHAAVVIDYD 296


>gi|291286441|ref|YP_003503257.1| exodeoxyribonuclease III [Denitrovibrio acetiphilus DSM 12809]
 gi|290883601|gb|ADD67301.1| exodeoxyribonuclease III [Denitrovibrio acetiphilus DSM 12809]
          Length = 266

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 75/311 (24%), Gaps = 79/311 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V++N+N                   +    L +  +    DI+ LQE    +     
Sbjct: 1   MKVVTFNVN----------------SIRTRIHQLEKLIEKHSPDIIGLQETKVRDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         H  +AV  K   VL Q        ++  R    
Sbjct: 41  ------EFPVEEISRLGYHVEFHGQKTHYGVAVMSKEKPVLVQKGFPSDDSEAQRRL--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   +  ++       F      T+       ++    L  ++        
Sbjct: 92  ------IMCDFGSVKFIN-----GYFPQGESRTHPVKFPAKAKFYSDLLAYLNTSFSVDD 140

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                               ++ K +        + K K 
Sbjct: 141 NVLLVGDMNVAPTDYDIGISPDSVKRWLKQGKTSFLPEEREWIKNVADWGLTDVYRKIKP 200

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                      +             ID+ +  +      +           D      ++
Sbjct: 201 ESDEFMSWFDYRSKGFERDPKSGLRIDHIMATEALADCCVDCGI-------DYEIRGMEK 253

Query: 292 LSDHCPISIDY 302
            SDH P+  D+
Sbjct: 254 PSDHAPVWADF 264


>gi|255033851|ref|YP_003084472.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
 gi|254946607|gb|ACT91307.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
          Length = 365

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 100/333 (30%), Gaps = 70/333 (21%)

Query: 2   IRKYVLALVFFLVPCT-----------------ASVAQKVRLVSWNINTLSEQEGVSLWK 44
            +K +L L+     C                  A  A++  ++++N++      G     
Sbjct: 62  RKKAILPLIMVGAACFFLPRTYAFNSTAENVTAAEGAKEFSVMNYNVHVFQRNSGA---- 117

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-K 103
                   +   ++ +  +  AD++ + E  + + +  V     +      +    HS K
Sbjct: 118 -WKSEVKREIRKMKSWIIDSQADVICMPEYFNDDELKGVLDTRNYFSANGYQYNALHSQK 176

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
           +      +  +AV  K   V  +                   ++  +++    + VL +H
Sbjct: 177 KQGKRKGYWGLAVFSKYPIVAVRDTVF---------EEQNGMIQTDIKVGEDTVRVLALH 227

Query: 164 LKS-----------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
           L S                                +  + + + ++ W+ Q   S  P +
Sbjct: 228 LYSMTLQLGALVAQKEMDGIKREGRITFGKMKNGFTRRAAEYEIVQSWVDQ---SPYPLI 284

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GDFN            +  +  +       K +      N+     I ID+   D + 
Sbjct: 285 VCGDFNEVP-----YGYVYGKLRKHLRNSFEEKGRGFGFTYNQIPYF-IRIDHQFYDDSR 338

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  +FS++ Y            SDH PI 
Sbjct: 339 LSLHAFRTFSKVPY------------SDHNPIM 359


>gi|254411438|ref|ZP_05025215.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181939|gb|EDX76926.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 261

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 75/285 (26%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++++NI                +        +    +    DI+  QE  ++  +   
Sbjct: 3   IRIITFNIRY-------DKPDPDNQDWRIRRDAIAALIQEYHPDIIGTQEGKAHQLLDLH 55

Query: 84  FPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                +             +      +      +   +  +             +     
Sbjct: 56  RRLPNYQSIGGDRTGTGTGEHCAIFYNQDRLKCLDNGDFYLSDTPDIAGSISPEWGNPAP 115

Query: 143 RRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           R A   +  +    K I   + HL               S       A+ ++D +     
Sbjct: 116 RMATWAVFSVAQVSKTITCFNTHLDYT------------SAKARELGARLIRDRMIHCHP 163

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 + GDFN +   L        + +    +D+L     EK    +          +
Sbjct: 164 DNTYLFLTGDFNAEPGSLPREILSDSSTNSMILHDALAGVELEKQQSIHGFTGEAF-AAV 222

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D    D    +  +           D+ K +G   SDH P+  ++
Sbjct: 223 DTIYYDSRLRQETV---------TVDNRKWQGIFPSDHFPVIANF 258


>gi|332142708|ref|YP_004428446.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327552730|gb|AEA99448.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 237

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 88/280 (31%), Gaps = 52/280 (18%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+V++NI++   ++              DY  + Q+  +  AD+V LQEM +     +  
Sbjct: 3   RIVTYNIHSGIGRDK-----------KQDYKRIGQFLASSGADVVLLQEMDTRP-PERDT 50

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            ++   I       +  S      D     A+  +   +   +  +  +         R 
Sbjct: 51  AQDVRDICAENTFKLIPSPAIREADGWYGNAILTRYDVLSNDTVDVSQSG-----RQPRN 105

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV- 203
              + ++     + V++ H                       Q   L + ++Q+ +    
Sbjct: 106 VQIVELKTEKTPLTVVNTHKGLKKL-------------ERRSQFSLLHEHLSQRLKEKQT 152

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+AGDFN    +          +          ++K      +        +D   + 
Sbjct: 153 PLVLAGDFNEWQFFSKAFKGLNSLL---------FQQKVGATFPSHFPVFS--LDRVWVT 201

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +      ++             ++ +  SDH P+ ID +
Sbjct: 202 DDIKVKACRK----------LKNAKTRVYSDHLPVLIDIE 231


>gi|238014180|gb|ACR38125.1| unknown [Zea mays]
          Length = 371

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/358 (12%), Positives = 89/358 (24%), Gaps = 66/358 (18%)

Query: 11  FFLVPCTASVAQK--------VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           F  +P   + +Q          RLVS+NI      +        ++  +  S    +   
Sbjct: 9   FAPLPTEQTESQTDGGAARYQFRLVSYNILAQVYVKSTLFPHSPSACLKWKSRSGAILTE 68

Query: 61  AKNLDADIVFLQEMGSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            K+ DAD + +QE+  Y+    K    + +   Y                  +A  V+K+
Sbjct: 69  LKSFDADFMCIQELDEYDTFYKKNMENSGYSSIYIQRSGDKRDGCGIFYKPKSAELVQKE 128

Query: 120 NV-------------------------RVLQQSYPLLGAKDSFSRAGNR-----RAVELL 149
            +                            + + P    +   +    R       +   
Sbjct: 129 VILYNDLVEKYVPSDNVNSALENNSSAEEDKNAKPDNSKRGDPNDPRVRLKRDCVGLLAA 188

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            +++     +L +      +     +        L  +    +  I+ K       +IAG
Sbjct: 189 FKLSDPCDQILIVANTHIYWDPQWIDVKLAQAKYLLSRVSQFEQLISNKYNCKPSVIIAG 248

Query: 210 DFNRKINY------------------LGNNDDFWKTIDPNDSLI-----RFPKEKDSRCN 246
           DFN                          N      +   D         +         
Sbjct: 249 DFNSTPGDKLELSLEENYSELCFLLMEVYNYLLSANLGSTDEAPIKLRSLYAANGGEPEY 308

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N        +DY  +   +                +        +  SDH PI  D+
Sbjct: 309 TNYTPGFTGTLDYIFLSDGSSIKPTSLLRLPRGDSEDVKGGLPNFRHPSDHLPIGADF 366


>gi|154244152|ref|YP_001415110.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2]
 gi|154158237|gb|ABS65453.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2]
          Length = 290

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 80/317 (25%), Gaps = 63/317 (19%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++P  +++A  + + +WNIN                       ++R   + L  DI+ LQ
Sbjct: 9   ILPFQSAIALPLTICTWNIN----------------SVRIRLDIVRAAVETLRPDILCLQ 52

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E    +    +          +   +       +       +A   +   V  +     G
Sbjct: 53  ETKCQDDKFPLA---------AIRDMGFPHIALNGQKGWHGVATFSRRPFVSVEKGDFCG 103

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-LLSQQAQWL 191
             D+   A        L    GK + V + ++ +   +   E     +       +    
Sbjct: 104 KGDARHVAVTLAPEHAL----GKPLTVHNFYVPAGGDIPDPELNPKFAHKLAFLDEVTAW 159

Query: 192 KDWITQKKESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLI 235
                   +     V+ GD N                   +     +   +       + 
Sbjct: 160 PPLAAAAADDGRHAVVVGDLNIAPLETDVWGHKQLLNVVSHTPVEVERLNRFQASGPWVD 219

Query: 236 RFPKEKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                   +         +            +D+    Q+        +           
Sbjct: 220 VMRTFVPPKDKLFTWWSYRSPDYTANDRGRRLDHVWASQSLAPSAQAMTV-------LKD 272

Query: 286 KSRGKRLSDHCPISIDY 302
               ++ SDH P+S+ +
Sbjct: 273 ARGWEKPSDHVPVSLTF 289


>gi|291238440|ref|XP_002739137.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus
           kowalevskii]
          Length = 498

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 97/321 (30%), Gaps = 53/321 (16%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +   A  ++++S+N+  L   + + +     +RT      + +     D D++ LQE+  
Sbjct: 187 SPCQANILKVLSYNVREL---DFMYVHDGQRERTCRIPRRIVEQLG--DVDVIVLQEVFM 241

Query: 77  YNAVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 V    + +              RD+       + +  +     Q          
Sbjct: 242 GGCFPGVVSLRDLFRHHGFPHMTNKVGDRDTGFLEDGGVYIVSRWPITEQHETIFEATHY 301

Query: 136 SFSRAG-NRRAVEL----LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             + A   +  +       V+   +   V   H+++               S+   QA+ 
Sbjct: 302 MEADAFAAKGVIYAKIIKTVKGTSRNYHVFGTHMQAQIGDIHD--------SVREDQAKE 353

Query: 191 LKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-NDSLIRFPKEKDSRCNAN 248
           ++ ++  Q      P + AGDFN   +   N+    + +   N  +     +  +  +  
Sbjct: 354 MRAFMKDQNIPFSEPVIYAGDFN--CDVRANHRHVRRVLGKLNAGIPPRVGKLTATFDPT 411

Query: 249 KNLRN--------KIPIDYFVMDQNAYK---------FLIQESFSEILYNEDDIKSRGK- 290
            N              +DY V  ++  K          L  ++  EI  N     S    
Sbjct: 412 TNDMFEDKNQAPGPEWLDYVVYSKDHLKPWVSTLEGIKLTSKTQMEICSNGPFKPSYMYP 471

Query: 291 ------------RLSDHCPIS 299
                        LSDH P+ 
Sbjct: 472 DSSFCSKKRTITDLSDHYPVL 492


>gi|117619940|ref|YP_856704.1| nuclease [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117561347|gb|ABK38295.1| nuclease [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 1072

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/367 (10%), Positives = 84/367 (22%), Gaps = 84/367 (22%)

Query: 19  SVAQKVRLVSWNINTLSE--------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           + A  +R+ S+N+               G +    +V       T +      L+AD+V 
Sbjct: 472 AEAGDLRVASFNVLNFFTTVVGGDANPTGSNRGALTVAEFELQRTKIVSAITRLNADVVG 531

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN---------NDIHTAIAVRKKNV 121
           L E+ +          N      + +       R            + I   +  R   V
Sbjct: 532 LMEIENNGYGDNSAIANLVAALNAAQPDEADHYRWIASPDGQPIGTDAITVGLIYRPAKV 591

Query: 122 R-----------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
                       V Q        K      G R ++            +  +        
Sbjct: 592 TPEGAASLIALPVQQAEAVDASGKPVTINQGMRESLVQRFSSPKGDAPLTLVVNHLKSKG 651

Query: 171 DSLENTYSPSC------------SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +    Y                +L    A+ L + +          ++ GD N      
Sbjct: 652 SACFEDYPDYATADPLDGQGHCNALRVSAAKVLGEQLKDLAGD---LLLIGDMNAYGMED 708

Query: 219 GNN---------------DDFWKTI-------------DPNDSLIRFPKEKDSRCNANKN 250
                                + T+                  +    +   +   +   
Sbjct: 709 PIRVLTDYDPAAQPRHIMSASFTTLAGQPFEESGSALGKGYGYVNLNTRFHGTDTYSYSY 768

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------------LSDHCP 297
                 +D+ + + +    +I      I   E +    G +              SDH P
Sbjct: 769 EGELGNLDHALANPSLAAKVIGIEDWHINSAESNFFEYGSKYSGQLVKSEGPFSASDHDP 828

Query: 298 ISIDYDF 304
           + +   +
Sbjct: 829 VLVAIQY 835


>gi|310287972|ref|YP_003939231.1| the 5'-nucleotidase domain [Bifidobacterium bifidum S17]
 gi|309251909|gb|ADO53657.1| conserved hypothetical protein with the 5'-nucleotidase domain
           [Bifidobacterium bifidum S17]
          Length = 1597

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 54/373 (14%), Positives = 96/373 (25%), Gaps = 88/373 (23%)

Query: 14  VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSD------------------- 53
            P  A+V   +RL ++N+ N  S     +    S   T  D                   
Sbjct: 508 TPDLAAVGGDIRLATFNVLNYFSTTADKTGCSTSNAYTDRDGNPVTAKNCDVRGAWDKAN 567

Query: 54  ----YTLLRQYAKNLDADIVFLQEMGSY------------------------NAVAKVFP 85
                  + +   NL AD+V L+E+ +                         +A+ +   
Sbjct: 568 MERQRAKIVKAINNLGADVVSLEEIENSAKAASSVPASFKGERRDYALSTLVDALNEQAG 627

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-------RVLQQSYPLLGAKDSFS 138
           + TW    S + + +    D    I TA   +   V        +               
Sbjct: 628 EGTWAYVPSPQTVPDLDVEDV---IRTAFIYKPAKVATVGETRILTDSDAFNGKNGYEHG 684

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193
           R  + +A +     +     V+  H KS     +  N         +      QA  L  
Sbjct: 685 RQPDAQAFKAKGAADSDAFLVVANHFKSKGSASNALNQDPGDGSGNADYTRQAQADALLA 744

Query: 194 WITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-- 249
           +  + K    L    + GDFN                       +  ++      A    
Sbjct: 745 FTDEVKSDLKLEKVFLVGDFNAYYAEKPIQKIVAAGYTD--LSEQVSEKTGKYTYAYTVK 802

Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-------------- 290
                       +D+   ++ A + +       I   E       +              
Sbjct: 803 DESGNTNGGVGSLDHIFANEAAMRSVTGADIWNINSVESVALEYSRYNYNAKNLYQADQF 862

Query: 291 RLSDHCPISIDYD 303
           R SDH P+ I   
Sbjct: 863 RASDHDPVIIGIS 875


>gi|295688833|ref|YP_003592526.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756]
 gi|295430736|gb|ADG09908.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756]
          Length = 262

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 81/302 (26%), Gaps = 71/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ +WN+N                   +    +  + +    D+  LQE+        A
Sbjct: 1   MRIATWNVN----------------SVNARLERVLGWFEAEAPDVAVLQEIKCVDEKFPA 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F +  + +                   +  +A+  K+     +      ++D      
Sbjct: 45  EAFERLGYNVVVH------------GQKTYNGVALLSKHPVEDVRKGLPFLSEDEV-DEQ 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R    ++         V+ I+L +   + + +  Y  +        + L          
Sbjct: 92  ARYVEAVI--GAQTPFRVVGIYLPNGNPIGTEKFDYKLA------WMRRLHAHAQNLLAF 143

Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               VIAGD+N                   +   +   ++ +        +  + D    
Sbjct: 144 EENLVIAGDYNVIPEAQDVANPEAWLGDALFRPESRAAFRALKNLGLTDAY-MQTDGAPG 202

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+ ++   A   L               +   ++ SDH P
Sbjct: 203 GYTFWDYQAGAWQRNLGIRIDHLLLSPQAADRLENVVIH-------RDERDKEKPSDHVP 255

Query: 298 IS 299
           + 
Sbjct: 256 VV 257


>gi|253729789|ref|ZP_04863954.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253726524|gb|EES95253.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
          Length = 274

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 83/278 (29%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
           + N  +   +D      Y K  + D+V   E     A  K+         Y T       
Sbjct: 2   YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 60  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K + V+  H +S    DS          + ++Q + + D++ +          I GD N 
Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D +K ++ ND L                  N        +DY   D++  +
Sbjct: 175 N-KGTPEFKDMFKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271


>gi|283796572|ref|ZP_06345725.1| exodeoxyribonuclease III [Clostridium sp. M62/1]
 gi|291075985|gb|EFE13349.1| exodeoxyribonuclease III [Clostridium sp. M62/1]
 gi|295092540|emb|CBK78647.1| exodeoxyribonuclease III [Clostridium cf. saccharolyticum K10]
 gi|295115277|emb|CBL36124.1| exodeoxyribonuclease III [butyrate-producing bacterium SM4/1]
          Length = 251

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 77/302 (25%), Gaps = 78/302 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++SWN+N L    G                      + LDADI  +QE     A     
Sbjct: 3   KMISWNVNGLRACVGKGF---------------LDVFRKLDADIFCIQE-SKLQAGQIDL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  ++S           ++   ++  A+  K   +       + A D   R     
Sbjct: 47  DIPGYYQYWS----------YADKKGYSGTALFSKEEPISVVYGLGIDAHDHEGR----- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++    +  +VL  +  +     +                + L++          P
Sbjct: 92  ----VITAEYEDYYVLTCYTPNSQNELARLPYRMEWEDAFLAYLKKLEE--------KKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +  GD N                           +  +     +  +            
Sbjct: 140 VIFCGDLNVAHREIDLKNPRTNRKNAGFTDEERGKFSALLDAGFIDTYRHFYPDTEGVYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + ++    L+  S    +             SDHCP+ +
Sbjct: 200 WWSYRFKAREKNAGWRIDYFCVSESLEDRLVSASIHTEI-----------MGSDHCPVEL 248

Query: 301 DY 302
             
Sbjct: 249 VI 250


>gi|299145368|ref|ZP_07038436.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides sp. 3_1_23]
 gi|298515859|gb|EFI39740.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides sp. 3_1_23]
          Length = 366

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 84/299 (28%), Gaps = 68/299 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++N++  + +                   +  Y +NL ADI+  QE      +   
Sbjct: 110 LTVATYNVDAFNHEHTGYSC-----------KEIASYMRNLQADILCFQEF----GINDE 154

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F  ++     S      +            +AV  +     +       +K+        
Sbjct: 155 FGVDSIAAVLSDWPYY-YIPISPEGKNLLQLAVFSRYPIKEENLIVYPDSKNCS------ 207

Query: 144 RAVELLVEINGKKIWVLDIHLKSF-------------CFLDSLENTY---------SPSC 181
             +   +E N + I + + HL++                 DS                + 
Sbjct: 208 --LWCDIETNARTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQRVERAALGLIDGLHENF 265

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
              + QA  LK  I     S  P +I GDFN   +    +      +        F    
Sbjct: 266 RKRAVQANTLKQLI---AASPYPTIICGDFNSLPSSYVYHTVKGDKLQDG-----FQTSG 317

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                  K  ++ + IDY +                   N  D  S     SDH P+ +
Sbjct: 318 HGYMYTFKFFKHLLRIDYILHSPE--------------VNSTDYFSPDLTYSDHNPVVM 362


>gi|160879133|ref|YP_001558101.1| exodeoxyribonuclease III [Clostridium phytofermentans ISDg]
 gi|160427799|gb|ABX41362.1| exodeoxyribonuclease III [Clostridium phytofermentans ISDg]
          Length = 250

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                         + K +DADI  +QE     A    
Sbjct: 1   MKLISWNVNGIRACVQKGFC---------------DFFKEVDADIFCIQE-SKLQAGQIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LDFEGYYQYWNYAEKKGY----------SGTAIFTKKEPLQVT----YGMGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     +  +          +  + L++          
Sbjct: 91  -----VITLEFEDFYMVTVYTPNSQNELARLSYRMEWEDEFRRFLKKLEE--------TK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N     +                     +  +     +  F        +  
Sbjct: 138 PVVVCGDLNVAHKEIDLKNPNTNQMNAGFTIEERTKFSELLEAGFIDTFRYFYPDAMDMY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  Q     L+       +             SDHCPI 
Sbjct: 198 SWWSYRFKAREKNTGWRIDYFLASQGLESKLVSAKIHSQIL-----------GSDHCPIE 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEI 249


>gi|153853826|ref|ZP_01995182.1| hypothetical protein DORLON_01173 [Dorea longicatena DSM 13814]
 gi|149753576|gb|EDM63507.1| hypothetical protein DORLON_01173 [Dorea longicatena DSM 13814]
          Length = 250

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/304 (10%), Positives = 74/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                              DADI  +QE     A    
Sbjct: 1   MKFISWNVNGIRACAQKGFM---------------DIFNEADADIFCIQE-SKMQAGQLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +        G          R
Sbjct: 45  LDTPGYHQYWN----------YAERKGYSGTAIFTKEEPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  + + ++  +     +  +             + L++          
Sbjct: 91  -----VITLEFEDFYFITVYTPNSQSELARLDYRMRWEDAFLAYLKKLEE--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  +     +  F           
Sbjct: 138 PVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTNLLNAGFIDTFRYFYPDAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + ++    +        +             SDHCP+ 
Sbjct: 198 SWWSYRFSARKKNAGWRIDYFCVSESLKDRIKDAKILTEI-----------MGSDHCPVE 246

Query: 300 IDYD 303
           +D++
Sbjct: 247 LDFE 250


>gi|270293837|ref|ZP_06200039.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275304|gb|EFA21164.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 335

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/341 (11%), Positives = 89/341 (26%), Gaps = 57/341 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46
           M +  VL   +  V    +   +     +  +N+  L +    +   +           +
Sbjct: 1   MRKLLVLCSFWLCVATLGAQNAERKLYSVAFYNLENLFDTIHDAGKNDYEFLPDGSYQWT 60

Query: 47  VKRTTSDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
            K+  S    L +   +L  D+       + + E  +   +  +  +     +       
Sbjct: 61  AKKYESKLQNLSKVLGSLSRDLVPEGPAFIGVAEAENSRVLEDLVKQPAISNYEFVHYEG 120

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                     I  A+    K   V      L    +  +    R  + +  ++ G+++ V
Sbjct: 121 P-----DRRGIDCALLYDPKQFSVTHSKLVLSTPFEGDTVHLTRGFLIVDGQLAGERVCV 175

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S           SP     ++Q + LKD + +  +  +  ++ GD N       
Sbjct: 176 IVNHWPSR-------GAKSPVRVHAARQVKALKDSLMR-SDKKLKLIVMGDMNDDPMDES 227

Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                      +          +   +D               D  V+ +   K      
Sbjct: 228 MEVLGARKYPKQVKKGEFYNPWWETLEDKGVGTLLYRGKWNLFDQIVISKPLLKAKKGLR 287

Query: 275 FSEI------------------LYNEDDIKSRGKRLSDHCP 297
           +                            ++     SDH P
Sbjct: 288 YDHNEVFIRDYLIQQDGKYKGSPLRTHGGRTWLNGYSDHLP 328


>gi|296122827|ref|YP_003630605.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
 gi|296015167|gb|ADG68406.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
          Length = 321

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 92/327 (28%), Gaps = 50/327 (15%)

Query: 5   YVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           ++    + L+  T + A+   VR++S+N+    +                      +  +
Sbjct: 15  FIAGFSWLLLSSTVTQAESPVVRVMSYNLWHGGDAGKQP------------LEQTAKVIR 62

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
              AD+V LQE   Y    +  P     I              +  D     A+  +   
Sbjct: 63  EARADLVGLQETRGYATGGQPRPDRAKEIA--------QILGWNYFDQGGGTAILSRYPI 114

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                       +  S          L+ I  +   +L+I    + F+ + +     +  
Sbjct: 115 GKASPGKWGVEIEHPSGTKLYLFNAHLMYIPYQPYQLLNIPYGDYPFIKTEQEAIDFAKK 174

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------------- 223
              +Q + L   I     +     + GDFN   ++                         
Sbjct: 175 ARGEQVERLIADIKATVPADATVFVTGDFNEPSHWDWTAAAQKAGRCPIAVKWPSTSMMA 234

Query: 224 ----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEI 278
                    + +   +  P    +      + +++   ID+ +M Q   K L  +   E 
Sbjct: 235 ETGFIDTYREAHPDPVTAPGITWTPLTKITDPKDRHDRIDFVLMRQGGGKVLSSQVLGES 294

Query: 279 LYNEDDIKSRGKRLSDHCPIS--IDYD 303
               D +       SDH  +   ++  
Sbjct: 295 KEAADVVVIP--YPSDHRSVVSAVELT 319


>gi|255655350|ref|ZP_05400759.1| putative exodeoxyribonuclease [Clostridium difficile QCD-23m63]
 gi|296451338|ref|ZP_06893076.1| exodeoxyribonuclease III [Clostridium difficile NAP08]
 gi|296259754|gb|EFH06611.1| exodeoxyribonuclease III [Clostridium difficile NAP08]
          Length = 250

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 81/305 (26%), Gaps = 82/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWN+N +    G                    + K +DAD+  LQE          
Sbjct: 1   MRFISWNVNGIRACAGKGF---------------LDFFKEVDADVFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                                    +   +
Sbjct: 45  LDLPGYFQYWNYAERKGYSGTAIFTK-----------------------------KEPLK 75

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKES 201
               + +E + K+  V+ +  + F F+             L  + +W  D+I    K ++
Sbjct: 76  VMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYRTRWEDDFIDYLTKLDN 135

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++ GD N                         + +  +  +  +  +      +  
Sbjct: 136 HKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKFSKLLDSGFIDTYRYFNPDKEG 195

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF   +     LI       +             SDHCP
Sbjct: 196 VYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLISADIHTEVL-----------GSDHCP 244

Query: 298 ISIDY 302
           + ++ 
Sbjct: 245 VELEI 249


>gi|148268477|ref|YP_001247420.1| phospholipase C [Staphylococcus aureus subsp. aureus JH9]
 gi|150394540|ref|YP_001317215.1| phospholipase C [Staphylococcus aureus subsp. aureus JH1]
 gi|257793277|ref|ZP_05642256.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9781]
 gi|258413680|ref|ZP_05681954.1| beta-hemolysin [Staphylococcus aureus A9763]
 gi|258419786|ref|ZP_05682749.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9719]
 gi|258447831|ref|ZP_05695966.1| beta-hemplysin [Staphylococcus aureus A6224]
 gi|258454465|ref|ZP_05702432.1| beta-hemplysin [Staphylococcus aureus A5937]
 gi|282928805|ref|ZP_06336398.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A10102]
 gi|295407331|ref|ZP_06817129.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8819]
 gi|297246410|ref|ZP_06930252.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8796]
 gi|147741546|gb|ABQ49844.1| Phospholipase C [Staphylococcus aureus subsp. aureus JH9]
 gi|149946992|gb|ABR52928.1| Phospholipase C [Staphylococcus aureus subsp. aureus JH1]
 gi|257787249|gb|EEV25589.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9781]
 gi|257839633|gb|EEV64103.1| beta-hemolysin [Staphylococcus aureus A9763]
 gi|257844197|gb|EEV68583.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9719]
 gi|257858928|gb|EEV81796.1| beta-hemplysin [Staphylococcus aureus A6224]
 gi|257863322|gb|EEV86083.1| beta-hemplysin [Staphylococcus aureus A5937]
 gi|282589540|gb|EFB94628.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A10102]
 gi|294967776|gb|EFG43807.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8819]
 gi|297176681|gb|EFH35942.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A8796]
 gi|312830376|emb|CBX35218.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315128689|gb|EFT84691.1| phospholipase C [Staphylococcus aureus subsp. aureus CGS03]
          Length = 274

 Score = 86.1 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 82/278 (29%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
           + N  +   +D      Y K  + D+V   E     A  K+         Y T       
Sbjct: 2   YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 60  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K I V+  H +S    DS          + ++Q + + D++ +          I GD N 
Sbjct: 119 KNIHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D  K ++ ND L                  N        +DY   D++  +
Sbjct: 175 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271


>gi|326539108|gb|ADZ87323.1| endonuclease/exonuclease/phosphatase [Brucella melitensis M5-90]
          Length = 357

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 60/303 (19%)

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117
                ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R   
Sbjct: 53  IAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRDTT 112

Query: 118 ---KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKIWVL 160
              +        S+  L   D                 R   R  + + + I G+ + + 
Sbjct: 113 RDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLSLF 172

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNRKIN 216
             HLKS     + ++  + S  +   +A+ ++  I +K      +   ++I GDFN    
Sbjct: 173 VAHLKSMSGARNGQDGRASSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDYRE 232

Query: 217 Y----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP--- 256
                            +         +    ++    +                     
Sbjct: 233 RILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLERHLC 292

Query: 257 -IDYFVMDQNAY---------------KFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +DY +                      +       + +           + SDHCP+S+
Sbjct: 293 QLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCPVSV 352

Query: 301 DYD 303
             +
Sbjct: 353 TLN 355


>gi|313499211|gb|ADR60577.1| Exodeoxyribonuclease III [Pseudomonas putida BIRD-1]
          Length = 265

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +++ ++NIN                   S    L  + +    DI  LQE        
Sbjct: 2   KALKIATFNING----------------IRSRLPALLAWLEREQPDIACLQE-------- 37

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  +    L+    L G ++      
Sbjct: 38  --LKAADQQFPRAELEAAGYGSLHHGQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A   ++        V  ++L +       +  Y           + L        ES
Sbjct: 96  LEAAAHGVL--------VACLYLPNGNPQPGPKFDYK------LHWFECLIQHARSLYES 141

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++AGDFN     +                     ++ +     L            
Sbjct: 142 GHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESRACYQRLLDQGWLDAIRHLYPDERV 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ +++     +L +          D       + SDH P+
Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLNHELAPYLKRAGV-------DAWVRNEAKASDHAPV 254

Query: 299 SIDY 302
            I+ 
Sbjct: 255 WIEL 258


>gi|291528729|emb|CBK94315.1| exodeoxyribonuclease III [Eubacterium rectale M104/1]
          Length = 251

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                         +  ++DAD   +QE     A    
Sbjct: 1   MKFISWNVNGLRACVQKGF---------------LDFFNSIDADFFCIQE-SKLQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  KN  +       +   D   R    
Sbjct: 45  LDLPGYHQYWNYAEKKGY----------SGTAIFAKNEPLSVSYGIGIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++  +  +                   Q     ++++    ++  
Sbjct: 91  -----VITLEYDNFYLVTCYTPN-------SQNELKRLPYRMQWEDDFREYLKT-LDAKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N   N                          +  +     F           
Sbjct: 138 PVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKMTELLGSGFTDTFRYFYPDAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  +     L + +    +             SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFITSKRINDKLQKAAIHTDVL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +D +F
Sbjct: 247 VDIEF 251


>gi|291519655|emb|CBK74876.1| exodeoxyribonuclease III [Butyrivibrio fibrisolvens 16/4]
          Length = 250

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 78/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N L    G                    +   +DADI+ LQE+         
Sbjct: 1   MKFVSWNVNGLRAVMGKGFM---------------DFFDGIDADIIGLQEIKLSEG-QLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           + K  +  +++      +          +  AV  K   +       +   D   R    
Sbjct: 45  WDKPGYHAYWNYAEKKGY----------SGTAVFTKKEPISVSYGIGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  + +  +  +        +             Q L +          
Sbjct: 91  -----VITLEFEDFYFITCYTPNSQNELKRLDYRMTWEDDFRAYLQKLNE--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                              +     +  F      + +  
Sbjct: 138 GVILCGDLNVAHEEIDIKNPKTNRHNAGFTDEERAKMTELLSAGFVDSFRYFYPDQTDIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++    +                      SDHCPI 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFIVSEDIKDRMKDSKIHT-----------DVMGSDHCPIE 246

Query: 300 IDYD 303
           +D++
Sbjct: 247 LDFE 250


>gi|315606307|ref|ZP_07881323.1| exodeoxyribonuclease III [Prevotella buccae ATCC 33574]
 gi|315251998|gb|EFU31971.1| exodeoxyribonuclease III [Prevotella buccae ATCC 33574]
          Length = 249

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 81/302 (26%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWN+N L         ++                K LDAD   LQE          
Sbjct: 1   MRFISWNVNGLRACVSKGFEES---------------FKALDADFFCLQETKMQEG-QLN 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K+  +       +   D   R    
Sbjct: 45  LQFEGYDSYWNYAEKKGY----------SGTAIYTKHKPLNVTYGLGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +               +           +I Q  ++  
Sbjct: 91  -----VITLEMEDFYLITVYTPN-------SQDELRRLNYRMTWEDDFLKYI-QGLDAKK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWK--------------TIDPNDSLIRFPKEKDSRCNANK 249
           P ++ GD N     +   +                  TI  N       + K        
Sbjct: 138 PVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREKMTITLNSGFTDSFRYKYPEQVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++       L+       +Y            SDHCP+ +
Sbjct: 198 WWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIHTEVY-----------GSDHCPVEL 246

Query: 301 DY 302
           D 
Sbjct: 247 DL 248


>gi|111017313|ref|YP_700285.1| exodeoxyribonuclease III [Rhodococcus jostii RHA1]
 gi|110816843|gb|ABG92127.1| probable exodeoxyribonuclease III [Rhodococcus jostii RHA1]
          Length = 304

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 79/326 (24%), Gaps = 67/326 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N +   +          R                 D+V LQE+ +       
Sbjct: 1   MRIATFNVNGIRAAQRRGFEDWLGDR---------------GPDVVALQEVRARAEAIPP 45

Query: 84  FPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAV-RKKNVRVLQQSYPLLGAKD 135
                + + Y    +   +                +  A+ R        +         
Sbjct: 46  GVFGHYHLTYDEGDVAGRNGVAVLTRGAPVAVRTWSGTALMRAPGEMHTDRVELDPEPLA 105

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCSL 183
                   +   + V++    I V  ++L                        Y      
Sbjct: 106 RGLGEFANQGRYVEVDLAEAPITVASMYLPKGGLPAHLQKPGRMREAPDGGARYDRKMRF 165

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKT 227
           LS  A+ L       +      ++ GD N                         + F   
Sbjct: 166 LSAFARQLTRSRRTARARGRELLLMGDLNIAHTRSDVRNWRRSNQAEGFLPEEREWFDSI 225

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEI 278
           + P   +    ++                         IDY +   +  +  +       
Sbjct: 226 LSPRTLVDVVRRQHPGVDGPYSWWSWLGQSFVNDIGWRIDYHLATPDLARAAVTAG---- 281

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304
               D      +R+SDH P+ +DYDF
Sbjct: 282 ---TDRDPVADRRMSDHAPVVVDYDF 304


>gi|312076146|ref|XP_003140730.1| hypothetical protein LOAG_05145 [Loa loa]
 gi|307764104|gb|EFO23338.1| hypothetical protein LOAG_05145 [Loa loa]
          Length = 415

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 79/296 (26%), Gaps = 36/296 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS N   L        W       +     + +     + DIV L+E+   +   ++
Sbjct: 5   LRVVSLNCWALPLP-----WPFRSNDHSLRIKKIGEALLLNEYDIVALEEVWGEHDFLRL 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN- 142
                           ++            +  R   V  L   + L G      R    
Sbjct: 60  ------QEALKKIFGYSYYFHSGFTGSGICVFSRYPIVSTLMHRFTLNGFAHHIHRGDWF 113

Query: 143 --RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +    + +EI   ++     HL +                    QA  L  ++     
Sbjct: 114 AGKGVGLVEIEIEQYRVNFYAAHLHA-----EYNPNKDLYLPHRLAQAFELAQFVKHTSY 168

Query: 201 SLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCNANKNL- 251
           S    ++AGDFN + + L            D W     +         +   C   +   
Sbjct: 169 SADALILAGDFNIEPDNLAYQLIVQNANLRDAWIQKPNSCDDCGATFGRLDNCYTPQRFK 228

Query: 252 ---RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   +DY +     +   L          ++    +     SDH  +  ++ 
Sbjct: 229 NKKNYGKRLDYIMYRSGRSKIELKLCEIRMNRIHDQKSINY----SDHVGVYAEFS 280


>gi|302876908|ref|YP_003845541.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B]
 gi|307687596|ref|ZP_07630042.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B]
 gi|302579765|gb|ADL53777.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B]
          Length = 253

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                         + K++DADI  LQE          
Sbjct: 1   MKLISWNVNGIRACVEKGF---------------LDFFKSVDADIFCLQETKLQQG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S            A                G          R
Sbjct: 45  LDLEGYEQYWNYAEKKGYSGTAVFTKEKPLSAS--------------YGLNIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +     +                + L+           
Sbjct: 91  -----VITLEYDDFYLVTVYTPNSKEELARLEYRMEWEDAFRAYLKKLEK--------NK 137

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +  +  +      +  A 
Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKTNRKNPGFSDEERAKFSELLASGFIDTYRYFYPDKEGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARTKNAGWRIDYFVISEELKDKLVSAEIHNEIL-----------GSDHCPVE 246

Query: 300 IDY 302
           +  
Sbjct: 247 LVI 249


>gi|66046507|ref|YP_236348.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257214|gb|AAY38310.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 261

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 86/295 (29%), Gaps = 51/295 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               S +  + +++ N++                        LR+  + + ADIVFLQE+
Sbjct: 11  ATPVSASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEV 60

Query: 75  --GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                +   +V    T   +     S      + +     D     A+  K   +  ++ 
Sbjct: 61  HGEQQSHARRVKDWPTISQYEFLADSMWNDFAYGRNAVYPDGDHGNALLSKYPIIQHENL 120

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            +     S      R  +  ++++      V  I +                 S   QQ 
Sbjct: 121 DI-----SIHGTEQRGLLHCILDVPHAG-RVHAICVHLGLR-----------ESHRRQQL 163

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + L + + +      P ++AGDFN              ++  +     F +   +   + 
Sbjct: 164 KLLNELMAR-IPEGEPVIVAGDFNDWRQRAD------ASLQGSGLHEVFVERFGAPAKSF 216

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 + +D   +           S                 LSDH P++++  
Sbjct: 217 PARWPLLCLDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 260


>gi|67462992|ref|XP_648153.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS]
 gi|67464775|ref|XP_648579.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS]
 gi|67478856|ref|XP_654810.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS]
 gi|56464156|gb|EAL42767.1| phospholipase C precursor, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56464786|gb|EAL43197.1| phospholipase C precursor, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56471891|gb|EAL49424.1| phospholipase C precursor, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 304

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 33/305 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV 80
           Q ++++++NI                +R  +      +       DIV  QE+   +++ 
Sbjct: 8   QTIKILTYNIYCRPPGITARGNDYKKERLMTFCD---EELNKY--DIVAFQELFGAFSSK 62

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++F +      +  E  +   K          + +  +   V Q          S   +
Sbjct: 63  RRIFIEKAKQQGFVYEAHLERPKWPIYPVDG-GVCILSRFPIVSQHQKIYTRGCYSDGAS 121

Query: 141 GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198
             +  +   ++I  GK+I +   HL++  +        + S    + Q      +I +  
Sbjct: 122 A-KGVIHTKIDIGFGKEIHLFSTHLQADYY--ESREDNAKSRRHRNTQINECLHFINECT 178

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN----- 253
                P +  GD N K       DDF  T+  N+  I            +    +     
Sbjct: 179 AHDNDPIIFEGDLNIKGG-TKEYDDFLTTLHSNEFDIEAHDFLFEDKKVHPITHSEVIDG 237

Query: 254 ---------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DY    +N  +    ++    +            +SDH  +
Sbjct: 238 EQVDTVITSKVPAPINARLDYIWGIKNGRERKELKAIQTNVCKFQTTNKPFPYMSDHYGV 297

Query: 299 SIDYD 303
            +  +
Sbjct: 298 EVTLE 302


>gi|322434444|ref|YP_004216656.1| exodeoxyribonuclease III Xth [Acidobacterium sp. MP5ACTX9]
 gi|321162171|gb|ADW67876.1| exodeoxyribonuclease III Xth [Acidobacterium sp. MP5ACTX9]
          Length = 247

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 82/276 (29%), Gaps = 58/276 (21%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +    ++++      D++ LQE+      A+ F +  +     T+              
Sbjct: 5   RARAEHVKRWLAARQPDVLLLQELKGTEFPAEWFMEQGYHSAAVTQ------------KA 52

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           +  +A+  +    +  +      +DS +R      +E +++     + V++I+L +   +
Sbjct: 53  YNGVAIVSRTPLEVVSTTLAGDPEDSHARF-----LEAMID----GMRVVNIYLPNGNPV 103

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------- 217
            + +  Y  +          L + +       VP VI GDFN                  
Sbjct: 104 GTPKFEYKLA------WMDRLMEQMKVWLGDGVPTVIGGDFNVIPEEIDCHKPASWVHDA 157

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNA 266
                +   ++ +        F                          I ID+F++    
Sbjct: 158 LFQPESRARYRGMLELGYTDAFRTLHPGLGGQFTFWDYFRQAFESNRGIRIDHFLLTAEM 217

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              L            D       + SDH PI + +
Sbjct: 218 AGRLESCEI-------DRGPRGEAKPSDHTPIVVRF 246


>gi|206970057|ref|ZP_03231010.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           AH1134]
 gi|218234375|ref|YP_002369878.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264]
 gi|228955337|ref|ZP_04117345.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229153262|ref|ZP_04281440.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
 gi|229181366|ref|ZP_04308695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
 gi|206734634|gb|EDZ51803.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           AH1134]
 gi|218162332|gb|ACK62324.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus B4264]
 gi|228602102|gb|EEK59594.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
 gi|228629866|gb|EEK86517.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
 gi|228804470|gb|EEM51081.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 352

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 108/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N GK + ++++HL +        
Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  E+    ++ GD+N+ ++    +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|21283669|ref|NP_646757.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus MW2]
 gi|87160283|ref|YP_494624.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195913|ref|YP_500724.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151222138|ref|YP_001332960.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|221140348|ref|ZP_03564841.1| phospholipase C [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|253315026|ref|ZP_04838239.1| phospholipase C [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|258422838|ref|ZP_05685739.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9635]
 gi|258434311|ref|ZP_05688712.1| beta-hemplysin [Staphylococcus aureus A9299]
 gi|258444471|ref|ZP_05692804.1| beta-hemplysin [Staphylococcus aureus A8115]
 gi|258452367|ref|ZP_05700377.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A5948]
 gi|269203658|ref|YP_003282927.1| truncated beta hemolysin [Staphylococcus aureus subsp. aureus ED98]
 gi|282925003|ref|ZP_06332668.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9765]
 gi|294849557|ref|ZP_06790299.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9754]
 gi|296277053|ref|ZP_06859560.1| phospholipase C [Staphylococcus aureus subsp. aureus MR1]
 gi|300912910|ref|ZP_07130348.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304379191|ref|ZP_07361934.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|21205110|dbj|BAB95805.1| truncated beta-hemplysin [Staphylococcus aureus subsp. aureus MW2]
 gi|87126257|gb|ABD20771.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203471|gb|ABD31281.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150374938|dbj|BAF68198.1| truncated beta-hemolysin [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257847000|gb|EEV71013.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9635]
 gi|257849259|gb|EEV73240.1| beta-hemplysin [Staphylococcus aureus A9299]
 gi|257850362|gb|EEV74311.1| beta-hemplysin [Staphylococcus aureus A8115]
 gi|257859954|gb|EEV82792.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A5948]
 gi|262075948|gb|ACY11921.1| truncated beta hemolysin [Staphylococcus aureus subsp. aureus ED98]
 gi|282592697|gb|EFB97704.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9765]
 gi|294823694|gb|EFG40121.1| sphingomyelin phosphodiesterase [Staphylococcus aureus A9754]
 gi|300885688|gb|EFK80895.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302333671|gb|ADL23864.1| phospholipase C [Staphylococcus aureus subsp. aureus JKD6159]
 gi|302751900|gb|ADL66077.1| phospholipase C [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304342237|gb|EFM08133.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|315196779|gb|EFU27124.1| phospholipase C [Staphylococcus aureus subsp. aureus CGS01]
 gi|320139613|gb|EFW31482.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320143656|gb|EFW35434.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|329314681|gb|AEB89094.1| Sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329724930|gb|EGG61432.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 274

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 82/278 (29%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
           + N  +   +D      Y K  + D+V   E     A  K+         Y T       
Sbjct: 2   YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 60  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K + V+  H +S    DS          + ++Q + + D++ +          I GD N 
Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D  K ++ ND L                  N        +DY   D++  +
Sbjct: 175 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271


>gi|325191472|emb|CCA26245.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 521

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 87/305 (28%), Gaps = 22/305 (7%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            C  + ++ +R++++N+   +  + V    +  K        L    K  +A I+  QE+
Sbjct: 223 SCATNQSK-LRVLTYNVWNTNPSDQVG---SRWKDYNKRMDGLVDAVKQSEASIIGFQEI 278

Query: 75  G---------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
                      +  +  +  +     +     +    + D    +   +A+  +      
Sbjct: 279 RFDATLGQAGDHAQIQHLVSRLPNFQYVYQAAMHYIDRSDPFKRVEEGLAIFSRYPIHSS 338

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSL-ENTYSPSCSL 183
               L    +  +    R  +  +V++    K+ V   HL                    
Sbjct: 339 DYILLHKDPNDPNDQHQRICLHAVVDVPDWGKVDVYVTHLSLSKASRERSVIQIWKFMQA 398

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKD 242
                Q+L   +  + +S     + G      +     D    K ++P        +   
Sbjct: 399 GYGVTQFLLGDLNAEPQSEEIQFLQGTAALFGDKTDLRDSWLDKHVEPVPRSK--ERVDR 456

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKF----LIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           S      +      ID               +      E L N D + +     SDH  +
Sbjct: 457 SERFTFSSENPCKRIDLIFYRGQGVTKEIRLVGNNPLMEPLSNADKLNTNAMYPSDHRGV 516

Query: 299 SIDYD 303
             +++
Sbjct: 517 IAEFE 521


>gi|256425941|ref|YP_003126594.1| hypothetical protein Cpin_6992 [Chitinophaga pinensis DSM 2588]
 gi|256040849|gb|ACU64393.1| hypothetical protein Cpin_6992 [Chitinophaga pinensis DSM 2588]
          Length = 1087

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 88/316 (27%), Gaps = 39/316 (12%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + +  + +++V+WNI             +  +        +    K +DADI  L E+  
Sbjct: 608 SGTSLRSLKVVNWNIEWFGSPVQNPANDSLQQ------ANVTTILKKMDADIFALAEVVD 661

Query: 77  YNAVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                 V    P  ++ I        +    D  +    A   +   ++ L+    L   
Sbjct: 662 TARFRAVANQMPGYSYIISDFGSYADSIKDVDYVSAQKLAFLYKTSVIKGLRSYGVLRKG 721

Query: 134 KDS---FSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
             S   ++ +  R    L  +        ++   L          +    S +     A 
Sbjct: 722 GSSNAYYNWSSGRFPFLLEAQAKLNNDSALIRFVLLHAKANTGTASDKIESWNRRRNGAL 781

Query: 190 WLKDWITQKKESLVPFVIAGDFNRK----------INYLGNNDDFWKTIDPNDSLIRFPK 239
            LKD +  +  +    ++ GDFN             +   +  DF         +     
Sbjct: 782 ELKDSLDVQYPTANLVIL-GDFNDAFDKTITTELAPDTTTSYIDFLNDSIHYKPVTLLLS 840

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            +  +            ID  ++        +  S       E  + S     +DH P+ 
Sbjct: 841 LQGQQ----STASFNTVIDNVLISDEMALSYLPGSARVRKEVETLVNSYSSTTTDHYPVQ 896

Query: 300 -----------IDYDF 304
                       + +F
Sbjct: 897 TNYNLHILAHPAELEF 912


>gi|255009509|ref|ZP_05281635.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12]
 gi|313147282|ref|ZP_07809475.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12]
 gi|313136049|gb|EFR53409.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12]
          Length = 253

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 88/303 (29%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N+N L       L                ++    + D++ LQE  +      A
Sbjct: 1   MKIITYNVNGLRAAVNKGLP---------------EWLAEENPDVLCLQETKLQPDQYPA 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  +  + +   +          + +A+  K        +   G         
Sbjct: 46  EAFEALGYKAYLYSAQKKGY----------SGVAILTKIEP----DHIEYGMGIEEYDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++  S    D  +       +      +  + ++T+ ++S
Sbjct: 92  GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEAFQKYVTELRKS 139

Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                         +   + +             + + 
Sbjct: 140 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRTLYPEKQE 199

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + R           IDY ++ +     L +        +           SDHCP+
Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAVILNNAVH-----------SDHCPM 248

Query: 299 SID 301
           +++
Sbjct: 249 ALE 251


>gi|332187206|ref|ZP_08388946.1| exodeoxyribonuclease III [Sphingomonas sp. S17]
 gi|332012906|gb|EGI54971.1| exodeoxyribonuclease III [Sphingomonas sp. S17]
          Length = 257

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 84/302 (27%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                   +    L +Y    DADIV LQE          
Sbjct: 1   MKITTYNVNG----------------IKARLPRLLEYLAEADADIVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +      +            +AV  +       + P+   +       + 
Sbjct: 35  LKASDETFPVADIEAAGYGAVWHGQKSWNGVAVLAR------GAQPVERQRGLAGEDEDE 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            +  L  E+NG  + V  ++L +       +  Y        +  + L     +     V
Sbjct: 89  HSRYLECEVNG--LVVASLYLPNGNPQPGPKFDYK------LRWMERLAARARELLAEEV 140

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+AGD+N   N                   +   + + +    +     +        
Sbjct: 141 PAVLAGDYNVIPNDDDTFSVPAMASDALMQPESRQAYRRLLTQGWTDSVRTRAPKGGVWT 200

Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + +           ID+ ++   A   L+           D      ++ SDH P  +
Sbjct: 201 FWDYQAGSWQRDAGFRIDHLLLSPQAADRLVDAGV-------DKSYRGREKASDHAPTWV 253

Query: 301 DY 302
             
Sbjct: 254 RL 255


>gi|330898293|gb|EGH29712.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 248

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 86/291 (29%), Gaps = 51/291 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GS 76
           S +  + +++ N++                        LR+  + + ADIVFLQE+    
Sbjct: 2   SASVSLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEVHGEQ 51

Query: 77  YNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
            +   KV    T   +     S      + +     D     A+  K   +  ++  +  
Sbjct: 52  QSHARKVKDWPTISQYEFLADSMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHENLDI-- 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              S      R  +  ++E+      V  + +                 S   QQ + L 
Sbjct: 110 ---SIHGTEQRGLLHCILEVPHAG-RVHAVCVHLGLR-----------ESHRRQQLKLLN 154

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + + +      P ++AGDFN              ++  +     F +   +   +     
Sbjct: 155 ELMAR-IPEGEPVIVAGDFNDW------RRRADASLQGSGLHEVFVERFGAPAKSFPARW 207

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +D   +           S                 LSDH P++++  
Sbjct: 208 PLLCLDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 247


>gi|183230395|ref|XP_001913433.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS]
 gi|169802914|gb|EDS89784.1| phospholipase C precursor, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 304

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 33/305 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV 80
           Q ++++++NI                +R  +      +       DIV  QE+   +++ 
Sbjct: 8   QTIKILTYNIYCRPPGITARGNDYKKERLMTFCD---EELNKY--DIVAFQELFGAFSSK 62

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++F +      +  E  +   K          + +  +   V Q          S   +
Sbjct: 63  RRIFIEKAKQQGFVYEAHLERPKWPIYPVDG-GVCILSRFPIVSQHQKIYTRGCYSDGAS 121

Query: 141 GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198
             +  +   ++I  GK+I +   HL++  +        + S    + Q      +I +  
Sbjct: 122 A-KGVIHTKIDIGFGKEIHLFSTHLQADYY--ESREDNAKSRRHRNTQINECLHFINECT 178

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN----- 253
                P +  GD N K       DDF  T+  N+  I            +    +     
Sbjct: 179 AYDNDPIIFEGDLNIKGG-TKEYDDFLTTLHSNEFDIEAHDFLFEDKKVHPITHSEVIDG 237

Query: 254 ---------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DY    +N  +    ++    +            +SDH  +
Sbjct: 238 EQVDTVITSKVPAPINARLDYIWGIKNGRERKELKAIQTNVCKFQTTNKPFPYMSDHYGV 297

Query: 299 SIDYD 303
            +  +
Sbjct: 298 EVTLE 302


>gi|290976084|ref|XP_002670771.1| predicted protein [Naegleria gruberi]
 gi|284084333|gb|EFC38027.1| predicted protein [Naegleria gruberi]
          Length = 551

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 86/296 (29%), Gaps = 38/296 (12%)

Query: 15  PCTASVAQKVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
              +     + + S+NI     +S     ++              +    K    DI+ L
Sbjct: 284 TNLSFPPPTILVCSYNILAQCYISLSRYSNITNQKYLDWEIRKYKIFSVLKERRFDIIGL 343

Query: 72  QEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           QE+ + +A  +     +  + +++S +              +T   +  K  + L + YP
Sbjct: 344 QEIDNQHASQIQFFLEQEGFSVYHSYKNYPKKDGLILAIR-NTKFEIFNKGEKTLVKEYP 402

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            +              V     + G+   +++ HL                     +Q  
Sbjct: 403 EVFQY-----------VIARDRVKGRFFCIINCHLTFQPRDTGP----------REKQVN 441

Query: 190 WLKDWITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNA 247
            + + I +  +      +  GDFN   +         + I+  +S+      +       
Sbjct: 442 EILNQIGKIADPQKTSIIWFGDFNTSPHEKPI-----QLIEACESIPLQKSHDTVQEFWT 496

Query: 248 NKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +  I DY     +       +S   + +            SDH P+  ++
Sbjct: 497 CCGTTGRNSIVDYIWHSPSLQVK---DSGPCLEFVPKSSIPDEDHGSDHLPLFAEF 549


>gi|325981641|ref|YP_004294043.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
 gi|325531160|gb|ADZ25881.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
          Length = 283

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 80/307 (26%), Gaps = 53/307 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEMG-SYNAVA 81
           ++L+SWNI      +G             D   + +  + +   D++ LQE+  ++  + 
Sbjct: 1   MKLLSWNIQWGRGMDG-----------RVDLARIIRTIRQIGEFDVICLQEVAVNFPGLP 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               +N      +           +               A+  +        + L    
Sbjct: 50  GSRGENQVDELSAQLPGYTAIYGAATDVPDSLGGRSQFGNAIFTRLPVGQIWRHLLPWQA 109

Query: 135 DSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           +  + +  R  VE +V       + V+  HL+ +            +   L  +A  L  
Sbjct: 110 ELTTPSMQRVLVEAVVTTTEFGLLRVMTTHLEYYSHPQRQV--QIDAIRHLHHEAHTLSQ 167

Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSL---------I 235
                +E    F         ++ GD N        +       + +             
Sbjct: 168 RKFLTEERGGTFEVFPRPGEAILCGDLN-FPATAPEHAQILAPFNDDTPNFHDTWSVLNP 226

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     +    +      D+ ++     K L                      SDH
Sbjct: 227 GITHAPTVGIHPVDFVDRAECYDFVLITDGLVKHLKIHGI-----------DAETAASDH 275

Query: 296 CPISIDY 302
            P+ ++ 
Sbjct: 276 QPVWVEL 282


>gi|229164042|ref|ZP_04291979.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
 gi|228619425|gb|EEK76314.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
          Length = 342

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 106/321 (33%), Gaps = 60/321 (18%)

Query: 20  VAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
              + ++ ++NI               G     +S ++T  +   +  + +N ++D   L
Sbjct: 41  QGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKKMLSFLQNENSDFALL 100

Query: 72  QEMGSYNAVAKVFPKNTW-----------CIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           QE+   +  +    ++ +                  + +              ++   K 
Sbjct: 101 QEVDIKSLRSFDVNEHEFLKKGLSEYSSSFGKNYDTKWVPVPVTSPMGYAEAGLSTFSKY 160

Query: 121 VRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTY 177
                + + L G +    R  +  R  VE  + +N  K   ++++HL ++          
Sbjct: 161 TVQTAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKFVRLVNLHLSAYDKGG------ 214

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                +  QQA++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P   +   
Sbjct: 215 ----KIRKQQAEYLKEYMNKHYQNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLVELP 270

Query: 238 PKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               D       +                      ID F++  N    ++     ++ + 
Sbjct: 271 KGFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKFE 328

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                      SDH P+S  +
Sbjct: 329 N----------SDHNPVSAVF 339


>gi|304311554|ref|YP_003811152.1| hypothetical protein HDN1F_19240 [gamma proteobacterium HdN1]
 gi|301797287|emb|CBL45507.1| Hypothetical protein HDN1F_19240 [gamma proteobacterium HdN1]
          Length = 306

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 82/287 (28%), Gaps = 58/287 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGS 76
           +RL+S+NI+          +     R              +         D V LQE+  
Sbjct: 56  LRLLSYNIHAGLGTSSPHHYVTKSWRNLIPDTKGARRLDRIGSILSGY--DFVALQEVDG 113

Query: 77  YNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +  +    +  +       +       RD       +  +  + +    Q + L G K 
Sbjct: 114 GSIRSSFINQVRYFAEQGQFDYWYQQLNRDFGRFGQYSNGILSRYIPYEIQDHKLPGLKG 173

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A+          + V+ +HL                    ++Q  +L+D I
Sbjct: 174 -------RGAIVARYGDLSNPLVVVCLHLALG-------------ERARNRQLAYLRDLI 213

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                     ++ GD N             + I           + +   +   + + + 
Sbjct: 214 GI----AEHVIVMGDLNCS----------GEQILATPLRETHLIQANGSHHTYPSWKPQR 259

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+ ++  + +   ++                   LSDH PI+++ 
Sbjct: 260 SIDHILVSPSLHIRRVEV--------------LDVALSDHRPIAMEI 292


>gi|118477610|ref|YP_894761.1| hypothetical protein BALH_1938 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118416835|gb|ABK85254.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 264

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 89/292 (30%), Gaps = 42/292 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +R+ ++NI                         + +  +++   I+ LQE+ S   +
Sbjct: 5   SDILRIATFNIWN------------HESLWFERLEAICEEIRSISPHILALQEVRSSVNL 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +              ++  +     +A   K   + +++      ++S    
Sbjct: 53  NSKKNVAQY--IAGQIGYPFCIFKEYPDSPDEGLAFLSKIPIIAEEAIWETDIEESNYC- 109

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               A+ +     G K  V ++HL               S  +  +Q   + +WI  +  
Sbjct: 110 ----AIRITFTYKGCKFGVTNVHLNW------------KSSRIRQEQMNTVNNWIENRAS 153

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--KDSRCNANKNLRNKI--- 255
                ++ GDFN     + +     K            +        +  KN   K    
Sbjct: 154 DYE--LLCGDFNDDPFSMVHQYLIRKHWIDVAQFKEIEENMIAQPTLDYRKNPNLKDDVK 211

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                D+ ++ +NA         +  ++ E  + S G   SDH  + +D  F
Sbjct: 212 QEKRYDWIMIQENAAFEF-PTIENVSIFGESALTSTGMFPSDHYGVFVDLKF 262


>gi|86750015|ref|YP_486511.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
 gi|86573043|gb|ABD07600.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
          Length = 284

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 80/313 (25%), Gaps = 69/313 (22%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             P  AS    +++ ++N+N ++                    +L  + K    DIV LQ
Sbjct: 17  AFPRGASEEAPLKIATFNVNNVN----------------KRLPVLLGWLKAAKPDIVCLQ 60

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ +                 +      +S           +A+  +    +  +   L 
Sbjct: 61  ELKAAQD----------DFPEAALLKAGYSAAWVGQKTWNGVAILARKRAEIVVTRRALP 110

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                 ++    A           + V  ++  +       +  Y  +        + L 
Sbjct: 111 GDAKDLQSRYLEAAVA-------GMIVGCLYAPNGNPQPGPKFQYKLA------WMKRLN 157

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRF 237
               +  +S VP V+AGDFN                           +  +         
Sbjct: 158 RHAAKLLKSGVPVVLAGDFNVVPTPADIYPTRSWDKDALLQPEPRALFAALLKQGWTDAL 217

Query: 238 PKEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                 +         +          ID+ ++D  + + L +          D      
Sbjct: 218 RALHPEQAPYTFWTYWRNRFERDHGLRIDHLLLDPASAQRLARGGV-------DRAIRGA 270

Query: 290 KRLSDHCPISIDY 302
              SDH P  I  
Sbjct: 271 PDASDHAPAWIVL 283


>gi|58038967|ref|YP_190931.1| hypothetical protein GOX0496 [Gluconobacter oxydans 621H]
 gi|58001381|gb|AAW60275.1| Hypothetical protein GOX0496 [Gluconobacter oxydans 621H]
          Length = 1750

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 86/313 (27%), Gaps = 55/313 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
           Q + +  +NI   +  +  +             T + Q   N     D++ LQE+   + 
Sbjct: 505 QNLLVSDYNIENFNALDPANAD---------RLTQVAQIIVNNLDSPDVLALQEIQDDSG 555

Query: 80  VA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                                     T+          N S   S  +I +      + V
Sbjct: 556 TTNDGTVSAEQNLAAIVKAIADAGGPTYSWAEVD-PTNNASGGVSGGNIRSVFLYNPERV 614

Query: 122 RVLQQSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
            +      +   +  S +    R  +    E NG+ + ++++HL S      L  +  P 
Sbjct: 615 TLAAPVTTIGDEELASGTFKNTRLPLVGTFEFNGQSVTLVNVHLSSQAGSSELYGSTQPP 674

Query: 181 CSL---------LSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            +             QAQ++ +++      +      I GDFN          D  +   
Sbjct: 675 VNHGGTTGTVNNRIAQAQYITNYVNGLLTSDPTAKVGILGDFNDT-----EWSDAQQVYA 729

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                     E  S         N   +D+ +           E+      +        
Sbjct: 730 NAGLTDMSTTEDPSNRYTYIFEGNAESLDHTIGSSAFASAGKFETIHVNTGSLTGE---- 785

Query: 290 KRLSDHCPISIDY 302
              SDH P S+  
Sbjct: 786 ---SDHDP-SVTL 794


>gi|294628698|ref|ZP_06707258.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. e14]
 gi|292832031|gb|EFF90380.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. e14]
          Length = 607

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 92/326 (28%), Gaps = 67/326 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ + ++N+  L   +             +  + +     +   DIV L+E+   N   
Sbjct: 302 GELAVATYNVENLDPSDSTF---------DAHASAIVHNLNS--PDIVSLEEIQDDNGAT 350

Query: 82  K-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIH------------- 111
                             V        + S + + +    +   +I              
Sbjct: 351 DDGTVGASKTVAKLIDAIVAAGGPRYEWRSIDPVNDQDGGEPGGNIRQVFLFNPARVSFT 410

Query: 112 --------TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                   TA+ V K + +    + P      S +   +R+ +       G+ ++V+  H
Sbjct: 411 DRPGGDSTTAVGVTKVHGKAALTASPGRIDPASDAWKSSRKPLAGEFVFRGRTVFVIANH 470

Query: 164 LKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINY 217
             S      L   Y P    S +    QA  +  ++    +       +  GD N     
Sbjct: 471 FASKGGDQGLTAQYQPPTRSSETQRHLQATEVNAFVKDILKIQKNADVIALGDMNDF--- 527

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                D  K ++    L    K              N+  +D  ++  +  +        
Sbjct: 528 --EFSDTAKILEGRGELWSAIKSLPKNERYTYDYQGNEQVLDQILVSPSIRRGDFAYDSV 585

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
            I     D      ++SDH P  + +
Sbjct: 586 HINSEFHD------QISDHDPQVLRF 605


>gi|239941948|ref|ZP_04693885.1| putative exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998]
 gi|239988412|ref|ZP_04709076.1| putative exodeoxyribonuclease [Streptomyces roseosporus NRRL 11379]
 gi|291445398|ref|ZP_06584788.1| exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998]
 gi|291348345|gb|EFE75249.1| exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998]
          Length = 271

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 76/307 (24%), Gaps = 65/307 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           + + S N+N L                        ++    +AD+V LQE+ +       
Sbjct: 2   LTVTSVNVNGLRAAAKKGF---------------VEWLAATEADVVCLQEVRAELAQLPE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     W   ++       +     +                +      G     +   
Sbjct: 47  EVGAPEGWHTVHAPAAAKGRAGVSVYSRHAP-----------ERVQIGFGGHGVPGAEEF 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +       +++ G  + V  ++L S       ++      +      Q LK         
Sbjct: 96  DTSGRYAEIDLPG--VTVASLYLPSGEVGTERQDEKERFMAAFLPYLQGLKARA---AAD 150

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               V+ GD+N                             + +D    +           
Sbjct: 151 GREVVVCGDWNIAHQEADLKNWKANRKSSGFLPEERAWLTRVLDEAAYVDVVRALHPDVE 210

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY +         ++          +   +  +R SDH 
Sbjct: 211 GPYSWWSYRGRAFDNDTGWRIDYQMATPGLAGRAVKAWV-------ERAATHAERWSDHA 263

Query: 297 PISIDYD 303
           P+++ Y+
Sbjct: 264 PVTVVYE 270


>gi|294012654|ref|YP_003546114.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S]
 gi|292675984|dbj|BAI97502.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S]
          Length = 256

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 85/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN                   +    L ++      DI  LQE+ + +     
Sbjct: 1   MRIATFNING----------------IKARLPRLLEWLDETRPDIACLQEIKTSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142
                          + +            +A+  +    V  +       +D  SR   
Sbjct: 41  ------TFPVRDIEDVGYGAIWHGQKGFNGVAILARGETPVEVRRGLEGEPEDEHSRY-- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +E + K + V  I+L +       +  Y        +  + L+D   Q     
Sbjct: 93  -------LEADVKGLRVASIYLPNGNPQPGPKFDYK------LRWMKRLRDRAAQIWAEE 139

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           VP ++AGD+N                       +   + + +    +     +    R  
Sbjct: 140 VPAILAGDYNVIPRDRDVYSVKAMAEDALMQPESRAAYRRLLGDGWTDAIASRHPAGRVW 199

Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              + +           ID+ ++   A   LI           D      ++ SDH P  
Sbjct: 200 TYWDYQMNAWPRDAGFRIDHLLLSPAAADRLIDAQV-------DKDFRGREKASDHAPTW 252

Query: 300 IDYD 303
           ++  
Sbjct: 253 VELS 256


>gi|171682868|ref|XP_001906377.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941393|emb|CAP67043.1| unnamed protein product [Podospora anserina S mat+]
          Length = 619

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 83/331 (25%), Gaps = 71/331 (21%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSY 77
             + + + S+N+  LS              ++    L+  +        D +FLQE+   
Sbjct: 298 QCKAITVGSYNVENLSP-------------SSEHLPLIASHVVTYLKSPDFLFLQEVQDN 344

Query: 78  NAVA-------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +                      K     T+          N        +I  A     
Sbjct: 345 SGPTNNDGITSANLTLSALAASIKAAGGPTYEFAEVAPATPNLDGGQPGGNIRPAYLYNP 404

Query: 119 KNVRV------------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
             + +                             P      + +   +R+ V       G
Sbjct: 405 AIISLYKPNQGQGDDATSVVKGSGKNSPPSLTFNPGRIEPANPAWTASRKPVVGAWVAKG 464

Query: 155 --KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFV 206
             K  + +++H  S     SL     P      +    QA     +I+Q    +     +
Sbjct: 465 ATKPFFTVNVHFGSKGGGSSLHGDRRPPINGGVTDRLAQANVTATFISQILNADPKAAVI 524

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
            AGDFN            +  I     L      K +         N   +D+  +  + 
Sbjct: 525 SAGDFNEFSFVRPMK--TFAEISKMKDLDEVAGIKPTERYTYAFDMNAQALDHMYVSPSL 582

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +         +   S  + +SDH P
Sbjct: 583 AASSKSDFEHIH---VNTWGSYAEMVSDHDP 610


>gi|146419034|ref|XP_001485482.1| hypothetical protein PGUG_03211 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 290

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 84/310 (27%), Gaps = 37/310 (11%)

Query: 4   KYVLALVFFLVPCTASVAQKV--RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           K+++ L    +   ASV + +  R+  +NI T S    V   K   +R       ++ Y 
Sbjct: 7   KFLVFLFVTSLAWAASVQKPLTFRVYDFNIKTASGNL-VPGEKPWSERKAGVIDSIKNYT 65

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                 IV LQE             +         +             +  I  +    
Sbjct: 66  SQH-PTIVGLQEALRGQL------DDIMKGLGPEWKFFGVGGSGDTKGEYCPIIYKSNEW 118

Query: 122 RVLQQSYPLLG-----AKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLE 174
            ++  +   L          +     R      +    +G+ I   + HL          
Sbjct: 119 ELVNGTTKWLSETPDKPSRGYGSKYERIVTFAELRHVSSGRTIHYFNTHLDP-------- 170

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI-DPNDS 233
                   +  +  + +  ++        P  + GDFN K           +        
Sbjct: 171 ----HDDHVRYESVRDIITYVN-HTRQGSPVFLGGDFNAKRTSAPYKYVATQMTPALIAP 225

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
             +    K+   N+     +   ID+     +             LY      S    +S
Sbjct: 226 DPKGVDNKEKSTNSGFQFNHPKTIDFIFFQDH------GSKVKVDLYEILSSTSGNVVIS 279

Query: 294 DHCPISIDYD 303
           DH P+  D+ 
Sbjct: 280 DHSPVIADFS 289


>gi|229072559|ref|ZP_04205761.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
 gi|229082318|ref|ZP_04214781.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
 gi|228700750|gb|EEL53273.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
 gi|228710535|gb|EEL62508.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
          Length = 352

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 108/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N GK + ++++HL +        
Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  E+    ++ GD+N+ ++    +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|30023103|ref|NP_834734.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 14579]
 gi|229049761|ref|ZP_04194318.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
 gi|229112516|ref|ZP_04242053.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
 gi|229130328|ref|ZP_04259287.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
 gi|29898663|gb|AAP11935.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 14579]
 gi|228653261|gb|EEL09140.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
 gi|228670896|gb|EEL26203.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
 gi|228722674|gb|EEL74062.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
          Length = 352

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 108/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPIINPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N GK + ++++HL +        
Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  E+    ++ GD+N+ ++    +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|46115046|ref|XP_383541.1| hypothetical protein FG03365.1 [Gibberella zeae PH-1]
          Length = 285

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 93/301 (30%), Gaps = 26/301 (8%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           + +++ +     C      K   +++N+  L E    +          ++  L+      
Sbjct: 9   QLLVSTLALSSLCLGQKTGKFNFLTYNVAGLPEIINGNDVPGDK---KTNSNLIGTAFAT 65

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
              DIV +QE  +Y+A         +      +R          + ++T           
Sbjct: 66  QGFDIVHMQEDFNYHA-------YIYATDNHPQRTPTSGGVPFGDGLNTVANYPWSTFSR 118

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            + +   L + D  +    +    + + I G ++ + ++H  +                 
Sbjct: 119 KKWNKCNLNSGDCLT---PKGFSFMRMAIGGVEVDLYNLHADAGS--------DQGDVDA 167

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            S     +  +I     +    +I GD N +    G      K  D   S       +  
Sbjct: 168 RSAGIDQVLAYINSN-SNGRAVIIGGDTNDRWTNAG--RSLNKLTDAGFSDAWVQLIQGD 224

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            C           +D       +   L   SF+ +   +  ++  G  LSDH P+ +D+ 
Sbjct: 225 PCKVPAADNKCEIVDKVFYRSGSSVKLSATSFNYVP--KLFLQPDGNILSDHNPVLVDFT 282

Query: 304 F 304
           +
Sbjct: 283 Y 283


>gi|331662145|ref|ZP_08363068.1| putative cytoplasmic protein [Escherichia coli TA143]
 gi|331060567|gb|EGI32531.1| putative cytoplasmic protein [Escherichia coli TA143]
          Length = 253

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 86/283 (30%), Gaps = 48/283 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---- 83
           S+N+ T++  +G + +             LR   + + ADIV LQE+   + V  +    
Sbjct: 9   SFNVLTINIHKGFTAFNRRF-----ILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVEN 63

Query: 84  FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +P  +   F +     +  + +     + H   AV  +                S   A 
Sbjct: 64  WPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVSVDGAE 118

Query: 142 NRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R  +   +     GK I V+ +HL                 +    Q   L +W+ +  
Sbjct: 119 KRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEWVNE-L 164

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P ++AGDFN       +       +D       F +               + +D 
Sbjct: 165 PDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPLLRLDR 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +   +                       + LSDH P+S + 
Sbjct: 220 IYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|306843439|ref|ZP_07476040.1| exodeoxyribonuclease III [Brucella sp. BO1]
 gi|306276130|gb|EFM57830.1| exodeoxyribonuclease III [Brucella sp. BO1]
          Length = 268

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 79/308 (25%), Gaps = 72/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
             + +WNIN                       L+ Q+ ++   D++ LQE         A
Sbjct: 3   FSIATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCPDDQFPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K F    +                S    +  +A   +      +        D      
Sbjct: 47  KGFRALGYEHIA-----------ISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH--- 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+ 
Sbjct: 93  ----LSAVVEAGDRKLRIHNFYVPAG--GDEPDPAINPKFAHKLAFLEEMRAIIADRKD- 145

Query: 202 LVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRC 245
               ++ GD N     N + ++    K +                            +  
Sbjct: 146 GCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQ 205

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +    +                    R SDH
Sbjct: 206 KIFTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDH 258

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 259 VPVIATFD 266


>gi|326790354|ref|YP_004308175.1| exodeoxyribonuclease III [Clostridium lentocellum DSM 5427]
 gi|326541118|gb|ADZ82977.1| exodeoxyribonuclease III [Clostridium lentocellum DSM 5427]
          Length = 251

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N +                         Y K +DAD+  +QE        ++
Sbjct: 1   MKCVSWNVNGVRAVLTKGF---------------LDYFKAVDADVFCIQETKCQEGQVEI 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +   +              ++  A+  K   +       +   D+  R    
Sbjct: 46  ELPGYYQYWNYAQ-----------KKGYSGTALFSKKEPLSVSYGLGIAEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    ++ +V+ ++  +     +  +             + L++          
Sbjct: 91  -----VITAEFEEAYVVTVYTPNAQNELARIDYRMAWEDAFKAYLKKLEE--------NK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD N                           +  +     +  F         A 
Sbjct: 138 PVIICGDLNVAHQEIDLKNPKTNRGNAGFSDEERGKFGELLEAGFIDTFRYFYPDLEGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  +     L+  +                  SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNTGWRIDYFLASEVLKDKLVGAAI-----------DAEILGSDHCPVI 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LEIN 250


>gi|228942241|ref|ZP_04104781.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228975171|ref|ZP_04135730.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228981810|ref|ZP_04142105.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228777922|gb|EEM26194.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228784692|gb|EEM32712.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228817575|gb|EEM63660.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326942895|gb|AEA18791.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 352

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 108/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N GK + ++++HL +        
Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  E+    +I GD+N+ ++    +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIIGGDWNQLVSNAQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|258405188|ref|YP_003197930.1| exodeoxyribonuclease III [Desulfohalobium retbaense DSM 5692]
 gi|257797415|gb|ACV68352.1| exodeoxyribonuclease III [Desulfohalobium retbaense DSM 5692]
          Length = 255

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 75/305 (24%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL SWN+N          W                +    D D++ LQE     A    
Sbjct: 1   MRLYSWNVNGFRAVVQKGFW---------------DWFAQCDGDVICLQE---TKATLDQ 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+    +              +    ++ +A   +   V        G  D   +   R
Sbjct: 43  VPEKHQHVNTHQIIWNG----ATVKKGYSGVACFARTPPVHWSR----GLPDMQYQGEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++L+I+  +        +            A+ L+           
Sbjct: 95  -----TLLLEYRDFYLLNIYFPNGQMSQERLDYKMGFYDAFFDYAEHLRQ--------TK 141

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                               I          +   S    
Sbjct: 142 PVIVCGDLNTAHTEIDLKNPKANADRSGFLPEERAWIDTFISHG--YHDTFRMFTSEGGH 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYF +       +      + +Y            SDHCPI
Sbjct: 200 YSWWTYRFNARARNAGWRIDYFFVSDELTGRVRNAWIEDTVY-----------GSDHCPI 248

Query: 299 SIDYD 303
            ++ D
Sbjct: 249 GLEID 253


>gi|89902379|ref|YP_524850.1| endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens
           T118]
 gi|89347116|gb|ABD71319.1| Endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens
           T118]
          Length = 287

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 83/287 (28%), Gaps = 48/287 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80
            +++++ NI+                        LR+  +++ AD+VFLQE+   +A   
Sbjct: 42  SIKVLTVNIHKGFTFFNRKF----------ILHELREAVRSVGADVVFLQEVTGSHARHE 91

Query: 81  AKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +V    T   +     S      + +       H   AV  K   V  +++ +      
Sbjct: 92  RRVADYPTNPHYEFLADSIWPQFAYGRNAVYPGGHHGNAVLSKFHIVSFENHDVSIIG-- 149

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +  ++++ G    V  I +               + S    Q   L D + 
Sbjct: 150 ---PERRGLLHCVLQVPGLDTQVHVICVHLGL-----------AESHRLLQLHMLCDLVH 195

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           Q   +  P ++AGDFN                   +    F +               + 
Sbjct: 196 QHIPASAPVIVAGDFND-----WRRRAHAVLAQGANLHEVFVQAYGKAARTFPARLPVLA 250

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D   +        +                    LSDH P++   +
Sbjct: 251 LDRIYVRNAIGHAPLVLPIR-----------PWSHLSDHAPLAATIE 286


>gi|103487661|ref|YP_617222.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256]
 gi|98977738|gb|ABF53889.1| Exodeoxyribonuclease III [Sphingopyxis alaskensis RB2256]
          Length = 256

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L ++ +    D+  LQE+ S +     
Sbjct: 1   MKIATFNING----------------IKARLPRLIEWLEERQPDVACLQELKSSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDSFSRAGN 142
                  +         +            +A+  K    V  Q      A+D  SR   
Sbjct: 41  ------TMPTKEIEAAGYGFLYHGQKGFNGVAILAKGADPVEVQRGLAGEAEDEQSRY-- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +E +   I V  I+L +       +  Y        +    L++       + 
Sbjct: 93  -------LEADAHGIRVASIYLPNGNPQPGPKFDYK------LRWMARLRERARMLLAAE 139

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           +P V+AGD+N   +                   + D +++ +    +     +       
Sbjct: 140 IPTVLAGDYNVIPHDDDVWDPRAMATDALMQPESRDAWFRLLGDGWTDALRSRHPAGHVW 199

Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              + +           ID+ ++       L+           D      ++ SDH P  
Sbjct: 200 TYWDYQAGAWQRDHGFRIDHLLLSPALADRLVDAGV-------DKDHRGREKASDHAPTW 252

Query: 300 IDYD 303
           +   
Sbjct: 253 VVLS 256


>gi|260574458|ref|ZP_05842462.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2]
 gi|259023354|gb|EEW26646.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2]
          Length = 262

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 75/305 (24%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L +WNIN++  +EG+                + +       DI+ LQE  S      +
Sbjct: 3   FTLATWNINSVRLREGL----------------VARLMAEEAPDILCLQECKSPVDKIPL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + L            +  +A+  K   +            +       
Sbjct: 47  ---------EQFQALGYRYMVARGQKGYNGVAILSKLPIMDAGDRDFASMGHARH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V   +E     + + + ++ +    D  +   +            ++DW   +K    
Sbjct: 93  --VAARLENG---VTIHNCYVPAG--GDIPDRDQNEKFGQKLDFLTEMRDWCRWEKPDRA 145

Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCNAN 248
             ++ GD N         ++    K +                 S +   +         
Sbjct: 146 --ILVGDLNIAPREDDVWSHKALLKIVSHTPIEVDHLTAVMEAGSWVDVTRADIPEGPLY 203

Query: 249 KNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+     +                        ++ SDH P+
Sbjct: 204 SWWSYRAAEWGAADKGRRLDHIWATPDIASAAHSS-------RILRAARGWQQPSDHAPV 256

Query: 299 SIDYD 303
              +D
Sbjct: 257 FATFD 261


>gi|123476231|ref|XP_001321289.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
 gi|121904112|gb|EAY09066.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
          Length = 339

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 25/301 (8%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77
              +K++++ +N     +   +   +    R+      + +Y      D+V LQE   + 
Sbjct: 47  FQTKKLKILDFNAFWRPQLLHLFKEEYMRDRSKILLERISEY------DVVCLQEGFQFG 100

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           + ++K F +    + +            ++  I + + +  K   +             F
Sbjct: 101 SDISKNFIEAANALGFKYVLTSKLPPLLNHQVIDSGLVIISKFPILESDCVRYTAGC-GF 159

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                + A+   ++++    + +   HL++       ++       +   Q   L   + 
Sbjct: 160 DAFAAKGALYAKIQLDEKNHVHLFSTHLQASY--QYGKDPTDVDVKVRQSQFDELSALMA 217

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--------- 247
           QK     P ++ GD N    +     +  K     +        KD   +          
Sbjct: 218 QKVTDGYPAIVVGDLNVNARFGDEYLNLLKHFTIPNYESVDTLLKDYGEHPITFGNMEDV 277

Query: 248 ----NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   +    IDY  + +     L  E  S++       +  G  LSDH  +  ++ 
Sbjct: 278 TLTEPYFQKTVQSIDYIFLFEKEQSPLKVEYKSKVNEMRVQNQPYGF-LSDHFAVESEFT 336

Query: 304 F 304
           F
Sbjct: 337 F 337


>gi|71898520|ref|ZP_00680691.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|182681462|ref|YP_001829622.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23]
 gi|71731644|gb|EAO33704.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|182631572|gb|ACB92348.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23]
 gi|307579913|gb|ADN63882.1| exodeoxyribonuclease III Xth [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 264

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 86/306 (28%), Gaps = 77/306 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+ SWN+N+L+                   + L+Q+      D++ LQE         
Sbjct: 2   KMRIASWNVNSLN----------------VRLSQLQQWLVEAAPDVLGLQET-------- 37

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    + +    +    +  +A+  +      Q                
Sbjct: 38  --KLEDHQFPEAALAALGYVSVYAGQKTYNGVALLARVALEDVQV------GIPEFEDVQ 89

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +   V+     I V+++++ +   + + +  Y  S          +  W+ ++ +  
Sbjct: 90  RRVIAATVD----GIRVVNLYVVNGQEVGTDKYAYKLS------WLDAVYHWLAEELQRY 139

Query: 203 VPFVIAGDFNRKINYLGNND-----------------DFWKTIDPNDSLIRFPKEKDSRC 245
              V+ GDFN   +     D                    K +     L    +      
Sbjct: 140 PRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAALDKLLGLG--LHDGFRLHHQDA 197

Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           ID  ++ +      +           D +    +R SDH 
Sbjct: 198 GIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGI-------DRVPRGWERPSDHA 250

Query: 297 PISIDY 302
           P  I+ 
Sbjct: 251 PAWIEL 256


>gi|206975161|ref|ZP_03236075.1| putative secreted protein [Bacillus cereus H3081.97]
 gi|206746582|gb|EDZ57975.1| putative secreted protein [Bacillus cereus H3081.97]
          Length = 264

 Score = 86.1 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 87/289 (30%), Gaps = 42/289 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI                         + +  + +   I+ LQE+ S   +   
Sbjct: 8   LRIATFNIWN------------HDSLWLERLEAICEEIRTISPHILALQEVRSCVNLNSK 55

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +             +   + D    +A   K   + +++      ++S       
Sbjct: 56  KNVAQYIAGQIGYPFGIFKEYPDSPDE--GLAFLSKIPIIAEEAIWETDIEESNYC---- 109

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+ +     G K  V ++HL               S  +  +Q   + +WI  +     
Sbjct: 110 -AIRITFTYKGCKFGVTNVHLNW------------KSSRIRQEQMNTVNNWIENRASDYE 156

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--KDSRCNANKNLRNKI------ 255
             ++ GDFN     + +     K            +        +  KN   K       
Sbjct: 157 --LLCGDFNDDPFSMVHQYLIRKHWIDVAQFKEIEENMIAQPTLDYRKNPNLKDDVKQEK 214

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             D+ ++ +NA         +  ++ +  + S G   SDH  + +D  F
Sbjct: 215 RYDWIMIQENAAFEF-PTIENVSIFGDSALNSTGMFPSDHYGVFVDLKF 262


>gi|260682949|ref|YP_003214234.1| putative exodeoxyribonuclease [Clostridium difficile CD196]
 gi|260686547|ref|YP_003217680.1| putative exodeoxyribonuclease [Clostridium difficile R20291]
 gi|260209112|emb|CBA62286.1| putative exodeoxyribonuclease [Clostridium difficile CD196]
 gi|260212563|emb|CBE03542.1| putative exodeoxyribonuclease [Clostridium difficile R20291]
          Length = 255

 Score = 85.8 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 81/306 (26%), Gaps = 82/306 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ +SWN+N +    G                    + K +DADI  LQE         
Sbjct: 5   SMKFISWNVNGIRACVGKGF---------------LDFFKEVDADIFCLQETKLQEG-QI 48

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  +++      +S                                    +   
Sbjct: 49  ELDLPGYFQYWNYAERKGYSGTAIFTK-----------------------------KEPL 79

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKE 200
           +    + +E + K+  V+ +  + F F+             L  + +W  D+I    K +
Sbjct: 80  KVMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYRTRWEDDFIDYLTKLD 139

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +  P ++ GD N                         + +  +  +  +  +      + 
Sbjct: 140 NHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKFSKLLDSGFIDTYRYFNPDKE 199

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDYF   +     L+       +             SDHC
Sbjct: 200 GVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADIHTEIL-----------GSDHC 248

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 249 PVELEI 254


>gi|93004917|ref|YP_579354.1| endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis
           K5]
 gi|92392595|gb|ABE73870.1| Endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis
           K5]
          Length = 257

 Score = 85.8 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 79/284 (27%), Gaps = 50/284 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L S+NI+             S          + Q    + +DI+ LQE+   N + +   
Sbjct: 14  LTSYNIH----------KGMSPMNRQVKVQGIAQALDIIGSDILCLQEVQGQN-LKRNIQ 62

Query: 86  KNTWCIFYSTERLI-------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            N +      E          ++ K    ++ H   AV  +         P      + +
Sbjct: 63  YNEYPDQSQHEWFGEYLQLENSYGKNSEYDNGHHGNAVLSRFPL-----DPKHNVNITVN 117

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           +   R  +   V+  G ++ V+ +      F                +Q + + +++  +
Sbjct: 118 KLEQRGVLHCEVQPVGWEVPVVVLCAHLNLF-----------ERDRIKQYEAISNYVRDE 166

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P ++AGDFN             +          F                 + +D
Sbjct: 167 IAPDQPLILAGDFNDWKKMS-----CDRLASSLGMTEAFKHCHGKLLPTFPAKLPVLSLD 221

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +       +                     LSDH P+S + 
Sbjct: 222 RIYVRN---LRIKDAWVH--------TGKPWSTLSDHLPLSAEL 254


>gi|134103032|ref|YP_001108693.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338]
 gi|291005211|ref|ZP_06563184.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338]
 gi|133915655|emb|CAM05768.1| AP endonuclease, family 1:exodeoxyribonuclease III xth
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 265

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 71/308 (23%), Gaps = 71/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           + + + N+N L                        ++     +D+V +QE         A
Sbjct: 2   LTVSTVNVNGLRAAAKKGF---------------VEWLAATGSDVVCMQETRAEPDQLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V     W    +           S +   + +A+  +      +        D   R  
Sbjct: 47  AVRSPEGWHTQLAP----------SADKGRSGVAIYSRREPDEVRVGFGSAEFDESGRY- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   VE     + V  ++L S       ++               L+      + +
Sbjct: 96  --------VEATFGDVVVASLYLPSGDVGTPRQDEKERFMKEFLVHLTDLRARA---EAA 144

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                             +  D    +    +      
Sbjct: 145 GKQALVCGDWNIAHREIDLKNWKGNQKSAGFLPEERAWLTQVFDEVGYVDVVRRLHPEGP 204

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY        +                  S  KR SDH 
Sbjct: 205 GPYSWWSYRGKAFDNDSGWRIDYLAATPALAERCTDAFVE-------RAPSYDKRWSDHA 257

Query: 297 PISIDYDF 304
           P++  +DF
Sbjct: 258 PVTAVFDF 265


>gi|89900093|ref|YP_522564.1| endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens
           T118]
 gi|89344830|gb|ABD69033.1| Endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens
           T118]
          Length = 252

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 87/285 (30%), Gaps = 54/285 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+ ++NI+           +    +   +   L    + LD+DIV LQE+   N   + 
Sbjct: 4   VRVATYNIH--------KGVQGIGPQRRLEIHNLGHAVEQLDSDIVCLQEVRLLN-RREA 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                W      E L                      A+  +   V  Q         S 
Sbjct: 55  QHFTRWPELSQAEFLAPEGYEAVYHTNAFTRHGEHGNAMLSRWPVVAYQQ-----EDISD 109

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  + + V ++G+ + V+ +HL                 +  ++Q   L+ ++ +
Sbjct: 110 HRFEQRGLLHVEVLVHGRAVHVVVVHLGLIK-------------ASRARQIAQLQRFVAR 156

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           +   + P ++AGDFN   +           +              +R          + +
Sbjct: 157 EVPPMAPLLVAGDFNDWGS----------LVQRALDATNLKTFTGARHPTYPARLPLVQL 206

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           DY          L+                   R+SDH P+  ++
Sbjct: 207 DYVYARG-----LVPLGVQVPQGRI------WSRMSDHLPLIAEF 240


>gi|229105686|ref|ZP_04236317.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
 gi|228677734|gb|EEL31980.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
          Length = 352

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  AQGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+            +  + K  P            + +              ++   K
Sbjct: 110 LQEVDIKSMRSFDINGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYADAGLSTFSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N  K   ++++HL +          
Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA---------- 219

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK+++ +  ++    ++ GD+N+ I+    +D  +    P+  +  
Sbjct: 220 YDEGGKIRKQQVEYLKEYMNKHYKNGDYVIMGGDWNQLISNAQLSDPKFVKERPDWLVEL 279

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 338 EN----------SDHNPVSAVF 349


>gi|183234893|ref|XP_001914105.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS]
 gi|169800852|gb|EDS89119.1| phospholipase C precursor, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 304

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 33/305 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV 80
           Q ++++++NI                +R  +      +       DIV  QE+   +++ 
Sbjct: 8   QTIKILTYNIYCRPPGITARGNDYKKERLMTFCD---EELNKY--DIVAFQELFGAFSSK 62

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++F +      +  E  +   K          + +  +   V Q          S   +
Sbjct: 63  RRIFIEKAKQQGFVYEAHLERPKWPIYPVDG-GVCILSRFPIVSQHQKIYTRGCYSDGAS 121

Query: 141 GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198
             +  +   ++I  GK+I +   HL++  +        + S    + Q      +I +  
Sbjct: 122 A-KGVIHTKIDIGFGKEIHLFSTHLQADYY--ESREDNAKSRRHRNTQISECLHFINECT 178

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN----- 253
                P +  GD N K       DDF  T+  N+  I            +    +     
Sbjct: 179 AHDNDPIIFEGDLNIKGG-TKEYDDFLTTLHSNEFDIEAHDFLFEDKKVHPITHSEVIDG 237

Query: 254 ---------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DY    +N  +    ++    +            +SDH  +
Sbjct: 238 EQVDTVITSKVPAPINARLDYIWGIKNGRERKELKAIQTNVCKFQTTNKPFPYMSDHYGV 297

Query: 299 SIDYD 303
            +  +
Sbjct: 298 EVTLE 302


>gi|294650031|ref|ZP_06727419.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824124|gb|EFF82939.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 822

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 90/320 (28%), Gaps = 46/320 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSYNAV 80
           +R  ++N+ N  + + G    + +  +   D     +    + +DADI  L E+ +    
Sbjct: 468 IRAAAFNVLNYDNGKNGFPTERGATSQAEFDKQHRKIVSAMRAIDADIYGLMEIANNGFG 527

Query: 81  AKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                        +  R +      R   + I  AI    K V+ + +   L    D   
Sbjct: 528 EDSAIAYLTRALGADWRYVVPENLDRLGTDAIAVAIIYNSKRVKPVNKPVVL----DLGD 583

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCF--------LDSLENTYSPSCSLLSQQAQW 190
           +     A         + + V+  HLKS               ++          +  + 
Sbjct: 584 KNRTTIAQTFQPISGKQMLTVIPNHLKSKSCSGVNAASLDADQKDGQGCWNPTRVKAVEQ 643

Query: 191 LKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           L  W  +          ++ GD N             +  +    L      +  +  + 
Sbjct: 644 LIQWAAKNPTQVETPNILLLGDMNSYAKEDPI--LALEKANYKVLLNDKTIGQGEQAYSY 701

Query: 249 KN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289
                           +D+ + D N Y  + +     I  +E  +               
Sbjct: 702 VFGVSSNAEGYGGAGNLDHAIADSNLYSKVKKAFVWHINADEPTVLDYNEEYKTDEQKAL 761

Query: 290 ------KRLSDHCPISIDYD 303
                  R SDH P+ +D D
Sbjct: 762 FFAEDPYRSSDHDPVIVDID 781


>gi|290956218|ref|YP_003487400.1| hypothetical protein SCAB_17031 [Streptomyces scabiei 87.22]
 gi|260645744|emb|CBG68835.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 305

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 72/285 (25%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +  +S+N+   +                    + +   +     ++  QE      +   
Sbjct: 49  LSTMSFNLRYANTV--------RPHSWAVRRPVTKALLRQEAPHVIGTQEGLHQQLLDIE 100

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   +  T R   +          T      +         P +   +++     R
Sbjct: 101 TDLGGNHRWIGTGRAGGNRDEFMAVFYDTRRLAPVEYRHFWLSDTPEVPGSNTWGGGSIR 160

Query: 144 RAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               +        G++ +VL+ HL +                    +A  L        +
Sbjct: 161 MVTWVRFRDLLDGGREFYVLNTHLDNLS-------------QYARDRAAALIVRRIAGFD 207

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PID 258
             +P V+ GDFN   +     D      +           +  +  +  + L      ID
Sbjct: 208 RSLPLVVTGDFNVAAHRNPVYDTMLDAGLVDTWDAAAERTDLYATFHGYRPLTPGGDRID 267

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +              +      +   S G+  SDH P+     
Sbjct: 268 WILTTP---------GVTAHRAAVNTFASNGQYPSDHLPVQATLT 303


>gi|261329150|emb|CBH12129.1| RNA-editing complex protein MP100 [Trypanosoma brucei gambiense
           DAL972]
          Length = 894

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 87/301 (28%), Gaps = 35/301 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              V   ++L++WN+         +          +   Y ++ +  +  DAD+V +QE+
Sbjct: 611 AGPVKASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVIAKIIEEEDADVVGMQEV 670

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                         +  F S   LI      S   +  AIA     + + ++  P+    
Sbjct: 671 E-----------PVFWEFLSKRPLIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSIN 719

Query: 135 DSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                A          + +++    + +   HL +           S   +L     + L
Sbjct: 720 YLNVPAWTNHVSLMPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTL 779

Query: 192 KDWITQKKESLVPFVIAGDFNRKIN------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                         V  GDFN          +     D W  + PND       E ++ C
Sbjct: 780 ---------GGGDVVTMGDFNDWPTNEFIMPHESQYVDCWPVLHPNDPGKTM-DETNTFC 829

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDY 302
                       D   +       +          N+++  +        SDH  +SI +
Sbjct: 830 KLKVEEMFFGRSDKVFLRSRRLVPVEAHLVGTRSVNDENNNADAPAYLFPSDHYGVSITF 889

Query: 303 D 303
            
Sbjct: 890 S 890


>gi|26989426|ref|NP_744851.1| exodeoxyribonuclease III, putative [Pseudomonas putida KT2440]
 gi|24984291|gb|AAN68315.1|AE016465_8 exodeoxyribonuclease III, putative [Pseudomonas putida KT2440]
          Length = 265

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 79/304 (25%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +++ ++NIN                   S    L  + +    DI  LQE        
Sbjct: 2   KALKIATFNING----------------IRSRLPALLAWLEREQPDIACLQE-------- 37

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  +    L+    L G ++      
Sbjct: 38  --LKAADQQFPRAELEAAGYGSLHHGQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A   ++        V  ++L +   L   +  Y           + L       +ES
Sbjct: 96  LEAAAHGVL--------VACLYLPNGNPLPGPKFDYK------LHWFECLIQHARSLQES 141

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++AGDFN     +                     ++ +     L            
Sbjct: 142 GHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESRACYQRLLDQGWLDAIRHLYPDERV 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ ++++    +L +          D       + SDH P+
Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLNRELAPYLKRAGV-------DAWVRNQAKASDHAPV 254

Query: 299 SIDY 302
            I+ 
Sbjct: 255 WIEL 258


>gi|125972979|ref|YP_001036889.1| exodeoxyribonuclease III Xth [Clostridium thermocellum ATCC 27405]
 gi|256004776|ref|ZP_05429751.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 2360]
 gi|125713204|gb|ABN51696.1| exodeoxyribonuclease III Xth [Clostridium thermocellum ATCC 27405]
 gi|255991226|gb|EEU01333.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 2360]
 gi|316940785|gb|ADU74819.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 1313]
          Length = 251

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 74/302 (24%), Gaps = 78/302 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L                         Y K  DADI  +QE           
Sbjct: 3   KLISWNVNGLRACINKGF---------------LDYFKKADADIFCIQESKVQPG-QIEL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
             + +  +++      +S       I                  PL           +R 
Sbjct: 47  ELDGYHQYWNYAERKGYSGTAVFTRIK-----------------PLCVQNGIGIDEHDRE 89

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              + +E +    ++++++  +        +               L        ++  P
Sbjct: 90  GRVITLEFDN--YYLVNVYTPNAKKELERLDYRMKWEDDFRNYLVGL--------KAKKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GD N                           +  +     +  F      +  A  
Sbjct: 140 VIVCGDMNVAHKEIDLKNPESNRRSAGFTDEERAKFTELLNAGFIDTFRFFYPDKTGAYT 199

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDYF + +     L+  S  +               SDHCP+ +
Sbjct: 200 WWSYMFNARARNAGWRIDYFCVSEELKDRLVSASIHD-----------DVMGSDHCPVEL 248

Query: 301 DY 302
             
Sbjct: 249 QI 250


>gi|239995602|ref|ZP_04716126.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii ATCC
           27126]
          Length = 232

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 89/278 (32%), Gaps = 52/278 (18%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++NI++   ++              DY  + Q+  N  AD+V LQEM +  +  +   +
Sbjct: 1   MTYNIHSGIGRDK-----------KHDYKRIGQFLANSGADVVLLQEMDTRPS-ERSTAQ 48

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
           +   I       +  S     +D     A+  +   +   +  +     S +    R   
Sbjct: 49  DVKDICAENTFKLIPSPAIRESDGWYGNAILTRFDVLAHDTLDV-----SQNGRQPRNVQ 103

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPF 205
            + ++     + V++ H                       Q   L + ++ + KE  +P 
Sbjct: 104 IVELKTEKTPLTVVNTHKGLKKL-------------ERRSQFSLLHEHLSLKMKEKQIPL 150

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           V+AGDFN    +        + +                     +      +D   +  +
Sbjct: 151 VLAGDFNEWQFFSKAFKALNELLLQQKVGA-----------TFPSHFPVFALDRVWVSDD 199

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 ++             ++ + LSDH P+ +D +
Sbjct: 200 IKVKACRK----------LKNAKTRILSDHLPVLVDIE 227


>gi|156972461|ref|YP_001443368.1| nuclease [Vibrio harveyi ATCC BAA-1116]
 gi|156524055|gb|ABU69141.1| hypothetical protein VIBHAR_00081 [Vibrio harveyi ATCC BAA-1116]
          Length = 982

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 94/382 (24%), Gaps = 96/382 (25%)

Query: 16  CTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66
             A     +R+ S+N+        +          R  ++          +      +DA
Sbjct: 467 APAIADSDLRIASFNVLNYFNSVADSGHENPTGQNRGATNLDEFLIQQAKIVAAMNKMDA 526

Query: 67  DIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHT 112
           DI+ L E+ +      +AV  +           ++ +      ++     +   ++ I  
Sbjct: 527 DIIGLMEVENNGFGDSSAVKNLVDALNAEIEDTEDHYTYVEIADQDKYQDEYFGSDAIMV 586

Query: 113 AIAVRKK--------NVRVLQQSYPLLGAKDSFSRAGNRRAVE----------LLVEING 154
           AI  R           V V  + +           A    A +            V+  G
Sbjct: 587 AILYRANEVTPKEAAKVIVTPEQHIEENTITRGDDAEGNPAYDKYQRHSLLQTFTVKETG 646

Query: 155 KKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           K + V+  H KS                   +      +     A  + D +   +    
Sbjct: 647 KDLSVVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAANVVGDALKGIEGD-- 704

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235
             ++ GD N                           + TI                    
Sbjct: 705 -VLVMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTTIGGGELQVEKTKIEKGYGYHN 763

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                  +   +         +D+ +   +  + ++      I   E ++     +    
Sbjct: 764 LNTVLHGADTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 823

Query: 292 ---------LSDHCPISIDYDF 304
                     SDH P+ I  DF
Sbjct: 824 MPKYKDAFSASDHDPVIIAIDF 845


>gi|75760558|ref|ZP_00740592.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218900223|ref|YP_002448634.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842]
 gi|228903576|ref|ZP_04067697.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           4222]
 gi|228968193|ref|ZP_04129193.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|74491954|gb|EAO55136.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218541450|gb|ACK93844.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842]
 gi|228791496|gb|EEM39098.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228856005|gb|EEN00544.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           4222]
          Length = 352

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 108/327 (33%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEINLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE+            +  + K  P         +   +    + N             +
Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N GK + ++++HL +     
Sbjct: 165 STFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA----- 219

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK+++ +  E+    ++ GD+N+ ++    +D  +    P 
Sbjct: 220 -----YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPE 274

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349


>gi|182416804|ref|ZP_02948195.1| exodeoxyribonuclease III [Clostridium butyricum 5521]
 gi|237669009|ref|ZP_04528993.1| exodeoxyribonuclease III [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182379266|gb|EDT76765.1| exodeoxyribonuclease III [Clostridium butyricum 5521]
 gi|237657357|gb|EEP54913.1| exodeoxyribonuclease III [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 254

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 79/303 (26%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L                         Y   +DADI  +QE         + 
Sbjct: 5   KLISWNVNGLRACVKKGF---------------LDYFNEMDADIFCVQETKLQEGQIDLE 49

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +  +  +             +    ++  AV  K   +  +    +   D+  R     
Sbjct: 50  LEGYYDYW-----------NYAEKKGYSGTAVFTKEKPISVKMGLGIEEHDNEGR----- 93

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +   K ++++++  +     +          +     + L+           P
Sbjct: 94  ----VITLEYDKFFLVNVYTPNSQQKLARLEYRMSWEDVFRNYLKDLEK--------NKP 141

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GD N                              +  +     F            
Sbjct: 142 VILCGDLNVAHKEIDLKNPSSNRKNAGFSDEERSKMSELLNSGFTDTFRYFYPDIEGVYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ Q+    L        +             SDHCP+ +
Sbjct: 202 WWSYRFNARANNAGWRIDYFIVSQSLNDKLEDAKIHTSI-----------EGSDHCPVEL 250

Query: 301 DYD 303
           + +
Sbjct: 251 EIN 253


>gi|77166097|ref|YP_344622.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|254435463|ref|ZP_05048970.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
 gi|76884411|gb|ABA59092.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|207088574|gb|EDZ65846.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
          Length = 288

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 80/287 (27%), Gaps = 56/287 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +RL+S+NI           +            R     T + Q     D DIV LQE  S
Sbjct: 19  LRLLSYNIQAGVITTRYHHYLTRSWKHILPDARRHQTLTSIAQVIS--DFDIVGLQEADS 76

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKD 135
            +       +             +        +I   + A+  +      ++Y L G   
Sbjct: 77  GSLRTGFVNQAKLLAELCDFPYFHQQATRRFANIAQQSNALLSRIQPSYLRTYRLPGL-- 134

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A+          + VL IHL                    +QQ     D+I
Sbjct: 135 ----VPGRGAILAHFGNPKNPLIVLLIHLALG-------------RRSRTQQL----DFI 173

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
           +    +    V+ GD N +++         KT                      + R K 
Sbjct: 174 SSLVHNHPYVVVMGDLNCQLHSPELRALLRKTGLKAPVTKIAT---------YPSWRPKR 224

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+ ++  +     +                    +SDH P++ + 
Sbjct: 225 HIDHILVSPSLEVIQVGALAH--------------AVSDHLPLATEI 257


>gi|116625780|ref|YP_827936.1| exodeoxyribonuclease III [Candidatus Solibacter usitatus Ellin6076]
 gi|116228942|gb|ABJ87651.1| Exodeoxyribonuclease III [Candidatus Solibacter usitatus Ellin6076]
          Length = 258

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 90/303 (29%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                     L  +      D+V LQE+    A  + 
Sbjct: 1   MKIATFNINNIN----------------KRLNNLTAWLSRAQPDVVCLQEL---KAEQRA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP        S  R + +            +A+  +      +  P+L          + 
Sbjct: 42  FPA-------SALRDLGYDGFWLGERSWNGVAIFAR------ECTPVLTRSSLPGNPKDS 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           +A  +   +NG  + +  ++L +       +  Y  +        Q L +   +  ++ V
Sbjct: 89  QARYIEAAVNG--VLIASLYLPNGNPQPGPKFDYKLA------WFQRLIEHGQELMKAGV 140

Query: 204 PFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+AGD+N                           + + +    +      + +     
Sbjct: 141 PVVLAGDYNVVPTAQDIYPTRSLDKNALIQPQSRQAYARLLAQGWTDALRTLQPEGPLWT 200

Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +           + +D+F++       L+           D      +  SDH P  I
Sbjct: 201 FWDYERGRWPLGKGMRLDHFLLSPTVSDRLVDGGV-------DRWVRGEENASDHAPAWI 253

Query: 301 DYD 303
             D
Sbjct: 254 VLD 256


>gi|319407432|emb|CBI81083.1| exodeoxyribonuclease III [Bartonella sp. 1-1C]
          Length = 260

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 86/302 (28%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNI                    + +  L ++ +    DI  LQE+ S +     
Sbjct: 1   MKIATWNIAG----------------IKARHETLCKWLEQNQPDIACLQEIKSVDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      T   + +            +A+  K V        +L      +    R
Sbjct: 41  ------NFPRDTIENLGYHIETHGQKSFNGVAILSKKVPDEV----ILRLPGDNNDKQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   N   I V  ++L +   ++S +  Y           + L            
Sbjct: 91  Y-IETVYSTNIGSIRVASLYLPNGNPINSEKYLYKIE------WMKRLYTHAKSLLAYEE 143

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N     L                     ++ I             D+   + 
Sbjct: 144 PLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIFQCITHLGFYDAIRNVTDAPSFSF 203

Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +         N I ID+ ++   A   L       I           ++ SDH PI I+
Sbjct: 204 WDFQANAWKKNNGIRIDHLLLSPEAADQL-------ICAYSQTEVRGYQKPSDHVPIWIE 256

Query: 302 YD 303
            +
Sbjct: 257 LN 258


>gi|288927024|ref|ZP_06420917.1| exodeoxyribonuclease III [Prevotella buccae D17]
 gi|288336198|gb|EFC74586.1| exodeoxyribonuclease III [Prevotella buccae D17]
          Length = 249

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 80/302 (26%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWN+N L         ++                K LDAD   LQE          
Sbjct: 1   MRFISWNVNGLRACVSKGFEES---------------FKALDADFFCLQETKMQEG-QLN 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K+  +       +   D   R    
Sbjct: 45  LQFEGYDSYWNYAEKKGY----------SGTAIYTKHKPLNVTYGLGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +                           +I Q  ++  
Sbjct: 91  -----VITLEMEDFYLITVYTPN-------SQDELRRLDYRMTWEDDFLKYI-QGLDAKK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWK--------------TIDPNDSLIRFPKEKDSRCNANK 249
           P ++ GD N     +   +                  TI  N       + K        
Sbjct: 138 PVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREKMTITLNSGFTDSFRYKYPEQVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++       L+       +Y            SDHCP+ +
Sbjct: 198 WWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIHTEVY-----------GSDHCPVEL 246

Query: 301 DY 302
           D 
Sbjct: 247 DL 248


>gi|269961414|ref|ZP_06175778.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833791|gb|EEZ87886.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 982

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 94/382 (24%), Gaps = 96/382 (25%)

Query: 16  CTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66
             A     +R+ S+N+        +          R  ++          +      +DA
Sbjct: 467 APAIADSDLRIASFNVLNYFNSVADSGHENPTGQNRGATNLDEFLIQQAKIVAAMNKMDA 526

Query: 67  DIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHT 112
           DI+ L E+ +      +AV  +           ++ +      ++     +   ++ I  
Sbjct: 527 DIIGLMEVENNGFGDSSAVKNLVDALNAEIEDAEDHYAYVEIADQDKYQDEYFGSDAIMV 586

Query: 113 AIAVRKK--------NVRVLQQSYPLLGAKDSFSRAGNRRAVE----------LLVEING 154
           AI  R           V V  + +           A    A +            V+  G
Sbjct: 587 AILYRANEVTPKEAAKVIVTPEQHIEENTITRGDDAEGNPAYDKYQRHSLLQTFTVKETG 646

Query: 155 KKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           K + V+  H KS                   +      +     A  + D +   +    
Sbjct: 647 KDLSVVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAANVVGDALKGIEGD-- 704

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235
             ++ GD N                           + TI                    
Sbjct: 705 -VLVMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTTIGGGELQVEKTKIEKGYGYHN 763

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                  +   +         +D+ +   +  + ++      I   E ++     +    
Sbjct: 764 LNTVLHGADTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 823

Query: 292 ---------LSDHCPISIDYDF 304
                     SDH P+ I  DF
Sbjct: 824 MPKYKDAFSASDHDPVIIAIDF 845


>gi|50955808|ref|YP_063096.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50952290|gb|AAT89991.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 280

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/304 (9%), Positives = 72/304 (23%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +    D D + +QE+         
Sbjct: 1   MRVATWNVN----------------SIRTRVARVVDWMVREDVDALAMQEIKCK------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y       +       +    +A+  +      +              G  
Sbjct: 39  ----PEQFPYEAFEKAGYEVVLHGLNQWNGVAIASRLPIDEAEIGFPDMPGFLKGHDGPG 94

Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              E   +    + + +  +++ +   LD    TY             L           
Sbjct: 95  LPTEARAIGATVEGVRLWSLYVPNGRALDDPHYTYKLD------WLAALLTNARSWLAED 148

Query: 203 V--PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
              P  + GD+N                   +        +   +    +          
Sbjct: 149 PELPLALMGDWNVAPLDSDVGDPSLIPGVSTHISPPERAAFAAFEQAGLIDVVRPIVPEG 208

Query: 245 CNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  + +      + ID+ +  +     ++  S           + +G   SDH P+
Sbjct: 209 YTYWDYKQLRFPRNEGMRIDFVLGSRAFADRVVDASIH-------RAERKGDAPSDHVPV 261

Query: 299 SIDY 302
            ++ 
Sbjct: 262 LVEL 265


>gi|94311051|ref|YP_584261.1| endonuclease/exonuclease/phosphatase [Cupriavidus metallidurans
           CH34]
 gi|93354903|gb|ABF08992.1| Metal-dependent hydrolase [Cupriavidus metallidurans CH34]
          Length = 284

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 57/306 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGS-------- 76
           L+SWNI      +G             D   +    + + DAD++ LQE+          
Sbjct: 3   LISWNIQWGRGADG-----------KVDLARIVDTLRGMADADVLCLQEITRGFSDLAGH 51

Query: 77  ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                          + + ++      H      +       +  +        + L   
Sbjct: 52  PGPDQVAELSALLPDYQVIFAPGVDRTHR---DGSPRQFGNVIATRLPVREIFRHALPWP 108

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            D    +  R A+E+ V+   + + ++  HL+ +    S     + +      QA     
Sbjct: 109 ADPDVASMPRVALEVTVQAGSRLLRIICTHLEYYS--TSQRAAQTEALRDWHVQACDHAR 166

Query: 194 WITQKKESLVPF---------VIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKD 242
              + +    PF         ++ GDFN +            +  + P+           
Sbjct: 167 HPGRSENRPGPFTPEPRPSEAILCGDFNSRPEDGAYLRMVETFGGVTPDWHDAWIHMHPG 226

Query: 243 SRCNANK-------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                 D+  +  +    + +   ++               SDH
Sbjct: 227 QPHAPTCALFDKEQWPEPPFACDFVFVTDDLLGNVRRCEVNDRT-----------DASDH 275

Query: 296 CPISID 301
            PI + 
Sbjct: 276 QPIHLT 281


>gi|257426156|ref|ZP_05602572.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428816|ref|ZP_05605211.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257431427|ref|ZP_05607801.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 68-397]
 gi|257434138|ref|ZP_05610489.1| beta-hemplysin [Staphylococcus aureus subsp. aureus E1410]
 gi|257437049|ref|ZP_05613090.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus M876]
 gi|282914863|ref|ZP_06322644.1| phospholipase C [Staphylococcus aureus subsp. aureus M899]
 gi|282919849|ref|ZP_06327581.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus C427]
 gi|282925360|ref|ZP_06333016.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus C101]
 gi|293507877|ref|ZP_06667719.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510849|ref|ZP_06669549.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus M809]
 gi|293545449|ref|ZP_06672125.1| phospholipase C [Staphylococcus aureus subsp. aureus M1015]
 gi|257271064|gb|EEV03233.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257274460|gb|EEV05972.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257277873|gb|EEV08537.1| beta-hemplysin [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281064|gb|EEV11208.1| beta-hemplysin [Staphylococcus aureus subsp. aureus E1410]
 gi|257283643|gb|EEV13769.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus M876]
 gi|282312994|gb|EFB43394.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus C101]
 gi|282316487|gb|EFB46864.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus C427]
 gi|282321257|gb|EFB51587.1| phospholipase C [Staphylococcus aureus subsp. aureus M899]
 gi|290919760|gb|EFD96832.1| phospholipase C [Staphylococcus aureus subsp. aureus M1015]
 gi|291094940|gb|EFE25208.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291466321|gb|EFF08847.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus M809]
          Length = 274

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 82/278 (29%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
           + N  +   +D      Y K  + D+V   E     A  K+         Y T       
Sbjct: 2   YPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 60  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K + V+  H +S    DS          + ++Q + + D++ +          I GD N 
Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D  K ++ ND L                  N        +DY   D++  +
Sbjct: 175 N-KGTEEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271


>gi|228961316|ref|ZP_04122933.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228798369|gb|EEM45365.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 352

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 108/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLAFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSL--RSFDINEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N GK + ++++HL +        
Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  E+    ++ GD+N+ ++    +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|224045591|ref|XP_002197268.1| PREDICTED: similar to Endonuclease/exonuclease/phosphatase family
           domain-containing protein 1 [Taeniopygia guttata]
          Length = 790

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 37/296 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ +WN+ + S    +    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 484 FRVATWNLQSCS----IEKANNPGVREVVCMTLLENSIK-----LLAVQELADREALEKF 534

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNVR-VLQQSYPL 130
             +       +  +                         ++           +   S   
Sbjct: 535 CMELNQPTLPNIRKWKGPRGCWKGVVSEKPSGQLHKGVEYSGFLWDTTAGIELKDASSQE 594

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   R           ++    + V+++HL               S          
Sbjct: 595 TAQTNGNGRHSYPHPYLAHFKVGMNDLTVVNLHLALPPSAGENTGKNHDSHK-----LAA 649

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDFN+  +   ++      +         P    +   + KN
Sbjct: 650 CAQSLQETLKGEKDVIILGDFNQAPDSSDHD-----ILRKEKFHHLVPSSTFTNI-STKN 703

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  ++
Sbjct: 704 PQGSKSLDNIWISRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 759


>gi|254303301|ref|ZP_04970659.1| possible endodeoxyribonuclease [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323493|gb|EDK88743.1| possible endodeoxyribonuclease [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 279

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 99/307 (32%), Gaps = 38/307 (12%)

Query: 1   MIR-KYVLALVFFLVP--CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M + K++L+++F L     + S A +  + S+NI  L                  D    
Sbjct: 1   MKKGKFLLSVIFALFFGLSSISSADEAYIASFNILRLGA-------------VKKDIPQT 47

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAV 116
            +  +    DIV L E+ + + V ++  +         +  I+     S+    + A   
Sbjct: 48  AKLLQGF--DIVGLVEVINRDGVEELVDELNKQGNEKWDYHISPFGVGSSKYKEYFAYVY 105

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +K  V+ ++        K S      R       +I      ++ +H             
Sbjct: 106 KKDKVKFIKSEGFYKDGKSSL----LREPYGATFKIGNFDFTLVLVHTIYG--------N 153

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                   + +   + D+   K ++     IAGDFN       +    +K  D     I 
Sbjct: 154 NEAQRKAENFKMVDVYDYFQDKDKNENDIFIAGDFNL-YALDESFRPLYKHADKITYAID 212

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              +         N       D F   Q   +     S   + ++ D+ K   + +SDH 
Sbjct: 213 PAIKTTIGTKGRANSY-----DNFFFSQKYSQEFTGSS-GALDFSGDNPKLMREIISDHI 266

Query: 297 PISIDYD 303
           P+ I  +
Sbjct: 267 PVFIVVE 273


>gi|329769257|ref|ZP_08260674.1| exodeoxyribonuclease [Gemella sanguinis M325]
 gi|328839251|gb|EGF88834.1| exodeoxyribonuclease [Gemella sanguinis M325]
          Length = 254

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 85/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+N+N L    G +  ++                K LDAD   LQE     A    
Sbjct: 1   MKCISFNVNGLRAIVGKNFEED---------------FKKLDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++           +    ++  A+  K   +       +   D+  R    
Sbjct: 45  LQFDGYYSYFN----------YAERKGYSGTAIYTKYKPLNVTYGIGIEEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     + + ++  +         +               KD++        
Sbjct: 91  -----VITLEYDNFFFITVYTPN-------SGSELKRLEYRMSWEDDFKDYLLT-LNKDK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                         + +  +     +  F         A 
Sbjct: 138 GVIVCGDLNVAHTEIDLKNPKTNVKNAGFTPEEREKFTKLLDAGFIDTFRYFNPDLTGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++  K+L+       ++            SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNSGWRIDYFLVSKDLKKYLVSAKIHNDIF-----------GSDHCPVE 246

Query: 300 IDYD 303
           +  D
Sbjct: 247 LVLD 250


>gi|254718052|ref|ZP_05179863.1| exodeoxyribonuclease III [Brucella sp. 83/13]
 gi|265982999|ref|ZP_06095734.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13]
 gi|306837613|ref|ZP_07470484.1| exodeoxyribonuclease III (xth) [Brucella sp. NF 2653]
 gi|264661591|gb|EEZ31852.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13]
 gi|306407320|gb|EFM63528.1| exodeoxyribonuclease III (xth) [Brucella sp. NF 2653]
          Length = 268

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 80/308 (25%), Gaps = 72/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
             + +WNIN                      +L+ Q+ ++   D++ LQE         A
Sbjct: 3   FSIATWNIN----------------SVRLRMSLVEQFLRDYQPDVLCLQETKCPDDQFPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K F    +                S    +  +A   +      +        D      
Sbjct: 47  KGFRALGYEHIA-----------ISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRH--- 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +  +VE   +K+ + + ++ +    D  +   +P  +      + ++  I  +K+ 
Sbjct: 93  ----LSAVVETGDRKLRIHNFYVPAG--GDEPDPAINPKFAHKLAFLEEMRAIIADRKD- 145

Query: 202 LVPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRC 245
               ++ GD N     N + ++    K +                            +  
Sbjct: 146 GCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHLIAADQ 205

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +    +                    R SDH
Sbjct: 206 KIFTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG-------LQVLRDARGWDRPSDH 258

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 259 VPVIATFD 266


>gi|160878851|ref|YP_001557819.1| endonuclease/exonuclease/phosphatase [Clostridium phytofermentans
           ISDg]
 gi|160427517|gb|ABX41080.1| Endonuclease/exonuclease/phosphatase [Clostridium phytofermentans
           ISDg]
          Length = 258

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 83/280 (29%), Gaps = 24/280 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V++NI     Q+G + +            L+ Q  K  +ADIV  QE   +      
Sbjct: 1   MKVVTFNIRCDYNQDGNNNF-------QYRKELILQKLKKENADIVCFQEALPHVVKWLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                + I           ++++         +   N   L  +  + G +        R
Sbjct: 54  ENLEDYYILSCGREKDLKGEQNTVAFKKEKYQLISMNTFWLSLTPDVPGTRYENQSMCPR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              E+ ++    +      +L +                 + +    + +   Q     V
Sbjct: 114 SVTEVFLQDLETE---KLYYLLNTHLDHEGSEARVLGMQQILKHMSGVAEQKKQAGFGKV 170

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++ GDFN   N           I  ++ L       +   +    ++    IDY V+ 
Sbjct: 171 EMILTGDFNGYPNSEEI-----SLIAKSEFLRDLTSGMEGTFHDFGRMQPAEKIDYIVVS 225

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                    G  LSDH P+S+  +
Sbjct: 226 SGL---------KCCTRELWTDCENGVFLSDHYPVSVVLE 256


>gi|93006020|ref|YP_580457.1| exonuclease III [Psychrobacter cryohalolentis K5]
 gi|92393698|gb|ABE74973.1| Exodeoxyribonuclease III [Psychrobacter cryohalolentis K5]
          Length = 274

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 80/311 (25%), Gaps = 75/311 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R V +NIN +  +                   +R      D D++ LQE   ++      
Sbjct: 3   RFVCFNINGIRAR-------------QHQLEAVRDII---DPDVMGLQETKVHDE----- 41

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                         + +         H  +A+  K   +  Q     G  +    A  R 
Sbjct: 42  -----QFPLENVEGLGYHVEYFGQKAHYGVALLSKVAPIFVQK----GFPNEDEEAQKRF 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +    E +G++I VL+       F       +     +       L  +I   K     
Sbjct: 93  -IHARYEFDGREIDVLN-----GYFPQGESQDHPTKFPMKRAYYADLMAYIDTLKAEGRS 146

Query: 205 FVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            VI GD N                        ++L    +++  +   +    +      
Sbjct: 147 LVIMGDMNIAPEDIDIGIGEVNAKRWLKNRKTSFLPEEREWYSNLMSRELTDTYRLHYPE 206

Query: 244 RCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                     +             ID+ +   +  +  +                  ++ 
Sbjct: 207 STELYSWFDYRSRGFDDDPKRGLRIDHILCTPDLVECCVDAGI-------SYELRAMEKP 259

Query: 293 SDHCPISIDYD 303
           SDH PI   +D
Sbjct: 260 SDHAPIWTAFD 270


>gi|260428642|ref|ZP_05782621.1| endonuclease/exonuclease/phosphatase family protein [Citreicella
           sp. SE45]
 gi|260423134|gb|EEX16385.1| endonuclease/exonuclease/phosphatase family protein [Citreicella
           sp. SE45]
          Length = 341

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 47/340 (13%), Positives = 94/340 (27%), Gaps = 62/340 (18%)

Query: 24  VRLVSWNINTLSE--QEGVSLWKNSVKRTTSDY------TLLRQYAKNLDADIVFLQEMG 75
           +RL ++NI        +   L  +       D         L      +DAD V + E  
Sbjct: 1   MRLATYNIEWFDALFDDSGRLLADGGWSGRHDITRRDQAEALGIVFTAMDADAVMIIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              +                 R         N      IA+      +  +  PL     
Sbjct: 61  DTGSRRSTVRALEAFAETYELRTRRVLTGFVNETQQE-IALLYDPAFLSARHAPLGQVTG 119

Query: 136 SFSRAGNRRAVELLVEIN---------------------GKKIWVLDIHLKSFCFLDSLE 174
           S           + ++I+                     G  + ++  HLKS     +  
Sbjct: 120 SHGSPRFDGVFRIDLDIDATEDRVVFSKPPLEIEAVTATGHVLRLIGAHLKSKAPHGAHN 179

Query: 175 NTY-----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------- 221
                     +      QA WL+  +    ++    ++ GD N                 
Sbjct: 180 RDQVMRLGIANRRKQLAQAIWLRRRVETHLQAGESVIVMGDLNDGPGLDEYEHLFGRSSV 239

Query: 222 ---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAY 267
                    D+  +  DP+ +     +       A   L+++       +DY ++  +  
Sbjct: 240 EIVLGEGVVDEAMRLHDPHAAQALCNRLGPQPTTARFFLKSQGRYLQAMLDYIMVSADLA 299

Query: 268 K----FLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDY 302
                + I   F + + +   +++      SDH P++ID 
Sbjct: 300 ATRPHWRIWHPFDDPVCWRTPELREALLTASDHFPVTIDL 339


>gi|163859167|ref|YP_001633465.1| hypothetical protein Bpet4846 [Bordetella petrii DSM 12804]
 gi|163262895|emb|CAP45198.1| conserved hypothetical protein [Bordetella petrii]
          Length = 286

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 87/322 (27%), Gaps = 83/322 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+NI+             S          LR     L  D+VFLQE+   N     
Sbjct: 4   IRVVSYNIH----------KGRSSLGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEHISF 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  +    + +      N      A+  +   V  +         S  R   R
Sbjct: 54  LDAQHESLAAALRLDVAYGCNAIRNRSDHGNALLSRYAIVEHE-----NQDISDHRLEQR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++++G+ +    +HL  F                 ++Q Q L D I++      
Sbjct: 109 GLLHARIQVDGRDVHCFVVHLGLFAGS-------------RTRQIQALTDRISRLVPEGD 155

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------------- 243
           P ++AGDFN   + L     F + +   +     P+                        
Sbjct: 156 PILVAGDFNDWGDRLAP--LFVQQLGLYEVFANAPRSHGGELPRLRDSVRRLSNVLRGVP 213

Query: 244 ----------------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                                        +     +D         +     S   +   
Sbjct: 214 NSVAVLERNNQLGMGGAYCPLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR-- 266

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
                    +LSDH P+  + +
Sbjct: 267 ----GREWAKLSDHAPLLAELE 284


>gi|115488172|ref|NP_001066573.1| Os12g0279600 [Oryza sativa Japonica Group]
 gi|77554323|gb|ABA97119.1| exodeoxyribonuclease III family protein, expressed [Oryza sativa
           Japonica Group]
 gi|113649080|dbj|BAF29592.1| Os12g0279600 [Oryza sativa Japonica Group]
 gi|215687325|dbj|BAG91875.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616909|gb|EEE53041.1| hypothetical protein OsJ_35763 [Oryza sativa Japonica Group]
          Length = 379

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 95/347 (27%), Gaps = 88/347 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P      +  R V+WN N+L            + R  SD+    Q+   +D D++ +QE+
Sbjct: 51  PPAPREEEPRRFVTWNANSL------------LLRMKSDWPAFCQFVSRVDPDVICVQEV 98

Query: 75  GSYNAVAKVFPKNT-----------------WCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               A +K  PKN                       S            ++  +   A+ 
Sbjct: 99  RMPAAGSKGAPKNPGQLKDDTSSSRDEKQVVLRALSSPPFKDYRVWWSLSDSKYAGTAMI 158

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            K     ++    L    S      R     ++    +   +L+ +  +     +     
Sbjct: 159 IKKKFEPKKVSFNLDRTSSKHEPDGR-----VIIAEFESFLLLNTYAPN-----NGWKEE 208

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------------------ 219
             S     +  + + +++ Q      P +  GD N     +                   
Sbjct: 209 ENSFQRRRKWDKRMLEFVQQV---DKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYIPP 265

Query: 220 -------------NNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIP 256
                            F   +     +  +               S     K    ++ 
Sbjct: 266 NKEDCGQPGFTLSERRRFGNILSQGKLVDAYRYLHKEKDMDCGFSWSGHPIGKYRGKRMR 325

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           IDYF++ +     ++           +     G   SDHCP+S++  
Sbjct: 326 IDYFLVSEKLKDQIVSCDIHGRGIELE-----GFYGSDHCPVSLELS 367


>gi|187476631|ref|YP_784654.1| endonuclease/exonuclease/phosphatase family protein [Bordetella
           avium 197N]
 gi|115421217|emb|CAJ47722.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella avium 197N]
          Length = 286

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 86/320 (26%), Gaps = 79/320 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+NI+             S          LR     L  D+VFLQE+   N    +
Sbjct: 4   IRVVSYNIH----------KGRSSLGRHESLNDLRLGLYGLRPDLVFLQEVQGRNETTSM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  +    + +             A+  +   V       +    S  R   R
Sbjct: 54  LHAQHESLAAALRLNVAYGCNAVRAATDHGNALLSRYDIVDH-----VNQDISDHRLEQR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +++ G ++  L +HL  F              S   +Q Q L + I  +     
Sbjct: 109 GLLHARIDVGGTEVHCLVVHLGLF-------------ASSRQRQIQALTERIRAEVPDGA 155

Query: 204 PFVIAGDFNRKIN-------------------------YLGNNDDFWKTIDP-------- 230
           P +IAGDFN   +                          L    D  + +          
Sbjct: 156 PLIIAGDFNDWGDKLAPQFVQQLGLYEVFSHAPRTSGGELPRLRDSLRRLTAALRGVPGN 215

Query: 231 -------NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                  N   +               +     +D         +     S   +     
Sbjct: 216 TVVLERGNQLGMDGTYCPLPPPRTFPAVFPWFRLDRIY-----QRGFAVRSARVLR---- 266

Query: 284 DIKSRGKRLSDHCPISIDYD 303
               +  +LSDH P+  + +
Sbjct: 267 --GRQWAKLSDHAPLLTELE 284


>gi|110637356|ref|YP_677563.1| hypothetical protein CHU_0946 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280037|gb|ABG58223.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 342

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/350 (10%), Positives = 92/350 (26%), Gaps = 61/350 (17%)

Query: 1   MIRKYVLALVFFLVPCTA------------SVAQKVRLVSWNINTLSEQEGVSLWKN--- 45
           M    +L     L+  +             + A   R+  +N   L +        +   
Sbjct: 4   MNISAILLFFVSLLSFSCSYRTETVNKSAKTAATTCRIGFYNTENLFDIYDDKHSNDNDF 63

Query: 46  --------SVKRTTSDYTLLRQYAKNLDADI-----VFLQEMGSYNAVAKVFPKNTWCIF 92
                   +  R       +++    L+ D+     + + E+ +   +  +   +     
Sbjct: 64  LPLGKLKWTADRYDVKLKHIKEVIDGLN-DLSTLALIGMSEVENKEVLEDLLKND----- 117

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
             T   I H        I   +         L          +       R  + +   +
Sbjct: 118 --TTFQIIHYNSSDRRGIDVCLLYNPAYFTPLTSYLSSFDKSN-DPELFLREVLVVKGVL 174

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
               + VL  H  S    +    T   + ++L+Q+   +   I     +    ++ GDFN
Sbjct: 175 WNDTVHVLVNHWPSRREGEEKSETKRIAAAMLTQEI--IDSIIQVNPSNN--ILLMGDFN 230

Query: 213 RKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
            + +    +        K     + +  F   +++     K   +    D  ++  +   
Sbjct: 231 DQPSDKSMSVMLNLKTTKKGKDGELINPFKALQEAGEGTCKYKHDWFLFDQILISNSISN 290

Query: 269 F----------------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                              +       +      +     SDH P+ I+ 
Sbjct: 291 KKGFQFTDAEIYHPEWLYYKNDLKSGPFRSYLGNTYYGGYSDHFPVYIEL 340


>gi|320159473|ref|YP_004172697.1| hypothetical protein ANT_00630 [Anaerolinea thermophila UNI-1]
 gi|319993326|dbj|BAJ62097.1| hypothetical protein ANT_00630 [Anaerolinea thermophila UNI-1]
          Length = 264

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 88/289 (30%), Gaps = 41/289 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + LV++N+ T   Q+G   W            ++ +  ++LDAD++ LQE+   +   
Sbjct: 3   HPLTLVTFNLRTAEAQDGEFSW-------ARRRDMVVECLRDLDADLIGLQEVHDDSQAR 55

Query: 82  KV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            V   FP+  W             + +       A  V ++    L    P +    S+ 
Sbjct: 56  DVRSAFPEYEWIGVRRGGNGAAPLEMNVALVRRGAFEVLEQQFFWL-SRTPEVPGSISWG 114

Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            A    A+ L +    NG +    + HL                     + A+ L+  I 
Sbjct: 115 SAYVCTAIFLRLRSCRNGAEAAWFNTHLDYLP-------------QARLEGAKLLRRRIE 161

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNL 251
                    ++ GDFN             +      +      +      +   +A   L
Sbjct: 162 A-LPPDCNVLVTGDFNAGKRSCVYRTLLGEGASCHRLRDAYRAVHTDGRGEGTFHAFGML 220

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                ID+ ++ ++                   +   G   SDH P+  
Sbjct: 221 PRPQAIDWVLVSKDLP---------VEDAGVACVSVGGVYPSDHYPVWA 260


>gi|291457988|ref|ZP_06597378.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291419320|gb|EFE93039.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 272

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 83/302 (27%), Gaps = 78/302 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L    G +   +                  LDAD+  LQE       A++ 
Sbjct: 4   KLISWNVNGLRAVLGKTFLSD---------------FHALDADVFCLQETKLQEGQAEL- 47

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++      +          +  A+  K   +       +   D   R     
Sbjct: 48  SLPDYHQYWNYAEKKGY----------SGTALFSKEEPLSVSYGIGIPEHDREGR----- 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++       ++L +++ +               S   +     +++I    E   P
Sbjct: 93  ----VISAEFPDCYILTVYVPN-------SQNELQRLSYRMEWEDAFREYILS-LEEKKP 140

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +  GD N                      +    +  +     L  F        +A  
Sbjct: 141 VIYCGDLNVAHQEIDLKNPASNHHNAGFTDDERAKFSRLLDCGYLDSFRFLHPEERDAYS 200

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYFV+ +   + +   S                  SDHCP+ +
Sbjct: 201 WWSYRTKARERNVGWRIDYFVVSEKLRERIRGASIH-----------PEIMGSDHCPVEL 249

Query: 301 DY 302
           D 
Sbjct: 250 DL 251


>gi|149369492|ref|ZP_01889344.1| hypothetical protein SCB49_06692 [unidentified eubacterium SCB49]
 gi|149356919|gb|EDM45474.1| hypothetical protein SCB49_06692 [unidentified eubacterium SCB49]
          Length = 366

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/324 (11%), Positives = 73/324 (22%), Gaps = 58/324 (17%)

Query: 25  RLVSWNINTLSEQ-------EGVSLWKNSVKRTT----SDYTLLRQYAKNLDADI----- 68
            +  +N+  L +        +     +     T     +    + +    +  DI     
Sbjct: 46  TIAFYNVENLFDFEDDPITFDDDRTPEGKDHWTEEIYNAKLVNIAKVISEIGTDITGTTP 105

Query: 69  --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             V L E  +   +  +            +  I          I  A+  +K+       
Sbjct: 106 AVVGLCETENRRVLEDLLN---QESLVQEDYGIVQFDSPDRRGIDVALLYKKRLFTPTNS 162

Query: 127 SYP---LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                 +    D+  R   R  + +   ++G+KI  +  H  S    +            
Sbjct: 163 KTHTLYIYDNVDNTKRVYTRDQLVVSGMLDGEKIHFIVNHWPSRSGGEERSRYKRNK--- 219

Query: 184 LSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPND-----SLI 235
               A  L   I     S  P    +  GDFN   +            +           
Sbjct: 220 ----AAALNRHIVDSLFSQDPYAKVITMGDFNDDPSNESIKKYLGAKKEKEGIQIKELYN 275

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRG 289
                            +    D  ++     K       L +       Y  +      
Sbjct: 276 PMESMHKKGIGTLAYRDHWNLFDQMIISTELTKDDYSSYRLYKAGIFNKNYLVNPRGRYK 335

Query: 290 KRL-------------SDHCPISI 300
                           SDH P+ +
Sbjct: 336 DYPFRSFTGGSFTGGYSDHFPVYL 359


>gi|14861062|dbj|BAB62090.1| deoxyribonuclease I precursor [Bufo japonicus]
          Length = 353

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 89/299 (29%), Gaps = 27/299 (9%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            ++  LV C       +++ S+NI   +                +  +LL Q  +  +  
Sbjct: 4   VILVALVACFLQAGFSLKIASFNIERFAVG---------KVDDPTVLSLLIQILRRYE-- 52

Query: 68  IVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           ++ +QE+      A+ ++  +           LI+     S+         R+  ++  +
Sbjct: 53  LIAVQEVMSKDNTAIIRLVQELNAATGLHYNLLISDHLGRSSYREKYVYIYREDILKPTE 112

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
             +   G ++  +    R            ++    +         ++            
Sbjct: 113 WYHYDDGCENCGTDVFIREPFVARFSSLTTELKDFALVSIHTSPDYAVREVDGLYDVWED 172

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            + + L +            +I GD+N   +Y+  +      +    SL     + +   
Sbjct: 173 AKQRLLLE----------DILILGDYNAGCSYVKTSHWPNIRLRQESSLQWLIGDTEDST 222

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
            +         +   V        +I  +     Y+     +    K +SDH P+ ++ 
Sbjct: 223 VSTNTHCPYDRL--VVGGARFQDTVIPGTAKAFNYHVAYDLTYEMAKAVSDHYPVEMEI 279


>gi|86136925|ref|ZP_01055503.1| exodeoxyribonuclease III, putative [Roseobacter sp. MED193]
 gi|85826249|gb|EAQ46446.1| exodeoxyribonuclease III, putative [Roseobacter sp. MED193]
          Length = 262

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 77/307 (25%), Gaps = 75/307 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
             L +WNIN++  +EG+                +++  +    D++ LQE  S   +   
Sbjct: 3   FTLATWNINSVRLREGL----------------VQKLMREEGPDVLCLQECKSPVDLIPT 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F K  +                     +  +A+  +       +    G   +     
Sbjct: 47  EGFAKLGY-----------PYMVARGQKGYNGVAILSRLPIAEAGAEDFAGLGHARH--- 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + V + ++ +    D  +   +            ++DW       
Sbjct: 93  ----IAGRLENG---VTVHNFYVPAG--GDKPDREVNEKFGQKLDYLTEMRDWFKAAAPE 143

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N         D               D    +          +       
Sbjct: 144 KS--ILVGDLNIAPREDDVWDHKKMLKIVSHTPVEVDLLAEVQDAGGWADVTRADIPEGL 201

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+    ++  +                     ++ SDH 
Sbjct: 202 LYSWWSYRAKDWDAADKGRRLDHVWATEDICQAAHSS-------RVLRAARGWEKPSDHA 254

Query: 297 PISIDYD 303
           P+   +D
Sbjct: 255 PVFATFD 261


>gi|71065757|ref|YP_264484.1| exonuclease III [Psychrobacter arcticus 273-4]
 gi|71038742|gb|AAZ19050.1| Exodeoxyribonuclease III [Psychrobacter arcticus 273-4]
          Length = 274

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 79/311 (25%), Gaps = 75/311 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R V +NIN +  +                   +R      D D++ LQE   ++      
Sbjct: 3   RFVCFNINGIRAR-------------QHQLEAVRDII---DPDVMGLQETKVHDE----- 41

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                         + +         H  +A+  K   +  Q     G     + A  R 
Sbjct: 42  -----QFPLENVEGLGYHVEYFGQKAHYGVAILSKVAPIFVQK----GFPGEDAEAQKRF 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +    E +G++I VL+       F       +     +       L  +I   K     
Sbjct: 93  -IHARYEFDGREIDVLN-----GYFPQGESQEHPTKFPMKRAYYADLMAYIDILKAEGRS 146

Query: 205 FVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            V+ GD N                        ++L    +++  +   +    +      
Sbjct: 147 LVVMGDMNIAPEDIDIGIGEVNAKRWLKNRKTSFLPEEREWYSALMSRELTDTYRLHYPE 206

Query: 244 RCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                     +             ID+ +   +     +                  ++ 
Sbjct: 207 STELYSWFDYRSRGFDDDPKRGLRIDHILCTPDLVAHCVDAGI-------SYELRAMEKP 259

Query: 293 SDHCPISIDYD 303
           SDH PI   +D
Sbjct: 260 SDHAPIWTAFD 270


>gi|332991677|gb|AEF01732.1| Endonuclease/exonuclease/phosphatase [Alteromonas sp. SN2]
          Length = 242

 Score = 85.8 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 91/279 (32%), Gaps = 52/279 (18%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++S+NI++   ++ +            +Y  + Q+     ADIV LQEM +  +  +  
Sbjct: 3   RIISYNIHSGLGRDKL-----------QNYHRIGQFLAESGADIVLLQEMDTRPS-ERAI 50

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            ++   I       +  +            A+  +   + Q+++ +     S      R 
Sbjct: 51  ERDIEDICAKNVYNLVSAPALHEPSGWYGNAILSRFNVIEQETFDV-----SQQGRQPRN 105

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLV 203
              ++++ +   + V++ H                       Q   L D++ Q  +   +
Sbjct: 106 VQVVVLQTDKGPLTVVNTHKGLKRL-------------ERRSQFALLHDYLEQRMQAHPM 152

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+AGDFN    +        K ++ +                ++       +D   + 
Sbjct: 153 PLVLAGDFNEWQFFSRAFTSLNKLLNQHK---------VGATFPSQFPIFS--LDRVWVS 201

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +      ++              +    SDH P+ +D 
Sbjct: 202 DDITVSECKK----------LTSKKASVFSDHLPVQLDI 230


>gi|163786792|ref|ZP_02181240.1| hypothetical protein FBALC1_16442 [Flavobacteriales bacterium
           ALC-1]
 gi|159878652|gb|EDP72708.1| hypothetical protein FBALC1_16442 [Flavobacteriales bacterium
           ALC-1]
          Length = 316

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 95/322 (29%), Gaps = 53/322 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD---- 65
           ++   +  +NI  L + E   L  +           + KR  +    L      +     
Sbjct: 5   SETYTIAFYNIENLFDIENDPLTNDDDFLPTSAKRWTPKRYQNKLMKLGTVISKIGEENT 64

Query: 66  ---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                IV L E+ +   V+ +                 H        I  A+  +    +
Sbjct: 65  EIAPVIVGLAEVENSKVVSDLVRSKN---LIDQAYSYIHYDSSDERGIDVALLYKSDVFK 121

Query: 123 VLQQSYPLLGAKDSFSRAG-NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-TYSPS 180
           V       +  +D   +    R  + +  E+  +K+ ++  H  S    +         +
Sbjct: 122 VENSETFSVYLQDELGKQDYTRDILLVQGELYNEKLNIIVNHWSSRREGEKETEFKRIAA 181

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            + ++   + LK      K+S    ++ GDFN        ND+    ++    L    K 
Sbjct: 182 ANKVNSIIRTLKQ-----KKSSAKIIVMGDFNDNP-----NDNSLSLLEKESELYNPFKT 231

Query: 241 KDSRCNANKNLRNKIPI-DYFVMDQNAYKF----LIQESFSEI---------------LY 280
             SR   ++N   +  + D  +   N +      L  +S                    +
Sbjct: 232 VWSREKGSQNYNFQWNLFDQILFSTNFFDANNSALDFDSADVFNSKFLTQYHGKYKGQPF 291

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                K      SDH P+ I  
Sbjct: 292 RTYVGKKYKGGYSDHFPVYIRL 313


>gi|284047996|ref|YP_003398335.1| exodeoxyribonuclease III [Acidaminococcus fermentans DSM 20731]
 gi|283952217|gb|ADB47020.1| exodeoxyribonuclease III [Acidaminococcus fermentans DSM 20731]
          Length = 250

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 78/305 (25%), Gaps = 80/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L++WN+N L                         +     ADIV +QE          
Sbjct: 1   MKLITWNVNGLRACMNKGF---------------ADFMTAAGADIVCVQETK-MQREQAS 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  ++++     +          +  AV  K   +        G          R
Sbjct: 45  FDFPGYHEYWNSAVKKGY----------SGTAVFSKTEPLSVT----YGLGQEEHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       ++++++  +     +              Q + +            
Sbjct: 91  -----VITAEYPDFYLVNVYTPNSQRGLTRLEYR--------MQWEDVFQDYCAGLARKK 137

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       ++    +  +  F      +  A 
Sbjct: 138 PVIVCGDLNVAAQPIDLKNPDSNHKNAGFTDEERAKFQQFLDHGFVDSFRSLYPDKEGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ QN    +        +             SDHCP+ 
Sbjct: 198 TWWSYMFKARERNAGWRIDYFLVSQNGKDRIQDVIIHNEV-----------MGSDHCPV- 245

Query: 300 IDYDF 304
            + ++
Sbjct: 246 -ELEW 249


>gi|94310134|ref|YP_583344.1| exodeoxyribonuclease III [Cupriavidus metallidurans CH34]
 gi|93353986|gb|ABF08075.1| exodeoxyribonuclease III (xth) [Cupriavidus metallidurans CH34]
          Length = 265

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 86/308 (27%), Gaps = 73/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-----DIVFLQEMGSYN 78
           +R+ SWN+N+L                      + Q+    DA     D + LQE+    
Sbjct: 1   MRIASWNVNSL----------------KVRLPQVLQWLGAQDAAGTPIDALCLQELK--- 41

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                 P + +    +  +        +    +  +A+  +       +   +      +
Sbjct: 42  -----LPDDKYP--LAELQAAGFHSIFTGQKTYNGVAILAR------NAAMPVPTDVVRN 88

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             G   A + ++      + ++  +  +   LDS +  Y           + + +W+  +
Sbjct: 89  IPGYEDAQQRVIAGTYGDVRLISAYFPNGQALDSDKFVYKLD------WLKAMIEWLRAE 142

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRFP----------KEKDSR 244
                   + GDFN        +D         + P +                +  +  
Sbjct: 143 MTRYPKLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQERDAFQTLIGLGLVDSFRMFEQP 202

Query: 245 CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    ++          ID+ ++  +  +              D    R ++ SDH
Sbjct: 203 EKMFSWWDYRMMGFRRNAGLRIDHILLSADLARQCATCVI-------DKEPRRWEQPSDH 255

Query: 296 CPISIDYD 303
            P+     
Sbjct: 256 TPVVATLT 263


>gi|154174202|ref|YP_001408089.1| putative endonuclease/exonuclease/phosphatase [Campylobacter curvus
           525.92]
 gi|112803131|gb|EAU00475.1| putative endonuclease/exonuclease/phosphatase [Campylobacter curvus
           525.92]
          Length = 480

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 100/324 (30%), Gaps = 62/324 (19%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYT---- 55
           +R + L ++  +       A ++ + ++N+  L +   +G       V  ++ D      
Sbjct: 1   MRVFWLIVLSLVFSF----AGEISIATYNVENLFDCKNDGSEYADFRVGSSSWDCAAANE 56

Query: 56  ---LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
               +++   +LD+DI+ L+E+ +   + ++     +     T +          + I  
Sbjct: 57  KVSRIKEVILSLDSDIIALEEIENEEILKELAKGTQYKYVLFTAQKGAPIGLGLISKIR- 115

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
                           P+         A  R  +++  E+ GK   +   H  ++    +
Sbjct: 116 ----------------PVKSEIFKVPNAKTRNILKVNFELEGKNFSIFVNHFPAYKNGKA 159

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            +                    +    E+    V+ GDFN               I    
Sbjct: 160 EQQKAER--------------TLRAALENEKNAVLLGDFNTPYGS---RSLLNDIIRIRS 202

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEILYNEDDIKSR 288
            +  +   +     ++     K  ID+ ++  + ++      + ESF    +    +K  
Sbjct: 203 YVDLWGFLEAKERYSHAVYGRKSAIDHVLLSPSFFENGELSYVFESFEV--FKPAFMKDE 260

Query: 289 GKRL---------SDHCPISIDYD 303
              +         SDH P+     
Sbjct: 261 NGYVRSQDGVNLYSDHFPLRFKIS 284


>gi|317124329|ref|YP_004098441.1| exodeoxyribonuclease III Xth [Intrasporangium calvum DSM 43043]
 gi|315588417|gb|ADU47714.1| exodeoxyribonuclease III Xth [Intrasporangium calvum DSM 43043]
          Length = 294

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 75/306 (24%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+++ N+N +                         +      D++ LQE+      +AK
Sbjct: 30  MRVITANVNGIRAAIRRGAAP---------------WISQAAPDVLCLQEVRAGETELAK 74

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +     ++          R         +AV  +      +        ++      
Sbjct: 75  ALAEAGLGHWHVAHTEGTVKGRA-------GVAVATREPHTAVRVGVEGAFAEAGRW--- 124

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              VE+ V      + V   ++ +       +                +   + +  ++ 
Sbjct: 125 ---VEVDVSTPAGVVTVASTYVHTGEAGTGRQVEKQL-------FLDAMTGRLERAAQAG 174

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              V+ GD N                         D F +  D    +            
Sbjct: 175 ALMVVTGDLNVAHREDDLKNWKGNLRKSGFLPEERDYFDRWFDELAWVDVHRVLHGPGPG 234

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY +   +        S           +S   R SDH P
Sbjct: 235 PYTWWSWRGKAFDNDAGWRIDYQLASASLAPLARSASVG-------RAESYAARWSDHAP 287

Query: 298 ISIDYD 303
           + +DYD
Sbjct: 288 VIVDYD 293


>gi|150003751|ref|YP_001298495.1| hypothetical protein BVU_1182 [Bacteroides vulgatus ATCC 8482]
 gi|149932175|gb|ABR38873.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 247

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 83/309 (26%), Gaps = 71/309 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +L L   L+  +A     +RL+++NI   +  + V            D+  +    
Sbjct: 1   MKKTLLLLFTLLLALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 49

Query: 62  KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            ++  ++V LQE+ S          + ++  +     +++             +     I
Sbjct: 50  NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 101

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  K + V  ++  L G      R   R  +    +                   +   
Sbjct: 102 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 148

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                           L+           PF +AGD N +                    
Sbjct: 149 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 185

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             F    D   +          IDY    +   K     S   +              SD
Sbjct: 186 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 236

Query: 295 HCPISIDYD 303
           H P+ +  +
Sbjct: 237 HRPLVVVLE 245


>gi|58584986|ref|YP_198559.1| exonuclease III [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|58419302|gb|AAW71317.1| Exonuclease III [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 260

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 87/304 (28%), Gaps = 68/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                        L  +  +   DI+ LQE+         
Sbjct: 2   LKIATWNVN----------------SIRKRVDQLCSFIVDDQIDIILLQEIKCTEE---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y     + +            + V  K+  + +    ++            
Sbjct: 42  ------QFPYVEIEKLGYECIVYGEVARNGVCVLSKHPILEKFKIDIVEGYQEARY---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E L++ N +K+ V+ I++ +   L S    Y        +    L + +    ++  
Sbjct: 92  --IECLIKHNNQKMRVVSIYVPNGQSLGSHVFEYK------LKFLDNLYERMDNLLKNEE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNANK 249
             VIAGD+N   + +   D               + +    N       +          
Sbjct: 144 LIVIAGDYNVAPDEIDVFDPTLLNGQVCFHIKEREKLKAILNLGFKDAFRMSHPNLQQFS 203

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             R           + ID+ ++   A   L            DD   + +  SDH PI  
Sbjct: 204 WWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYI-------DDRLRKLENPSDHTPIVS 256

Query: 301 DYDF 304
             ++
Sbjct: 257 IMEW 260


>gi|330876694|gb|EGH10843.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 261

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 85/287 (29%), Gaps = 51/287 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80
            + +++ N++                        LR+  +++ ADIVFLQE+     +  
Sbjct: 19  SLNVLTMNMHMGFGIFNRRF----------ILPELREAVRSVSADIVFLQEVHGEHQSHA 68

Query: 81  AKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +V    T   +     S      + +     D     A+  K   +  ++  +     S
Sbjct: 69  RRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHENLDV-----S 123

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +  ++E+      V  + +                 S   QQ + L + + 
Sbjct: 124 IHGTEQRGLLHCILEVPHAG-RVHAVCVHLGLR-----------ESHRRQQLKLLNELMA 171

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +      P ++AGDFN              ++  +     F +   +   +       + 
Sbjct: 172 R-IPEGEPVIVAGDFNDWRQRAD------ASLQGSGLHEVFVQRFGAPAKSFPARWPLLR 224

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D   +           S                 LSDH P++++  
Sbjct: 225 LDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVEVT 260


>gi|313894410|ref|ZP_07827975.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441234|gb|EFR59661.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 251

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 73/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L         ++                  LDADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVTKGFMES---------------FNELDADIFCLQETK-LQPEQIS 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++++     +          +  AV  +   +   +   +   D   R    
Sbjct: 45  LELPGYEQYWNSAVKKGY----------SGTAVFTRIKPLSVTNGIGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       +++  +  +     +                  L        +   
Sbjct: 91  -----VITAEYDNFYLVCCYTPNSQRELARLEYRMAWEDAFRNYLLEL--------DKKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                              +        F           
Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTELLGAGFTDTFRHLYPDAIEQY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  +     + +    + ++            SDHCP+ 
Sbjct: 198 SWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIF-----------GSDHCPVE 246

Query: 300 IDYD 303
           +D D
Sbjct: 247 LDID 250


>gi|325983079|ref|YP_004295481.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
 gi|325532598|gb|ADZ27319.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
          Length = 250

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 87/286 (30%), Gaps = 48/286 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81
            ++++++NI+       +                ++ + +++DADIVFLQE+     ++ 
Sbjct: 5   SLKVLTYNIHKGFSATNLRF----------ILHEIKNFLRHIDADIVFLQEVHGERRISN 54

Query: 82  ---KVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                +P      F +        + K    N  H   A+  K   +   +  +      
Sbjct: 55  QRFDNWPNTQQFEFLADQVWHHYAYGKNAIYNSGHHGNAILSKYPIIEWDNINVSML--- 111

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R+ +R  +  ++ I      +  I +    F                +Q   L   I+
Sbjct: 112 --RSASRSLLHGVISIPETNQKIHIICIHFGLFGHE-----------RKRQLSALVKRIS 158

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               +  P +IAGDFN       +                F   + +           + 
Sbjct: 159 THVSASEPLIIAGDFNDWREQAEHY-----LHRDLGVKEVFKITRGAYARTFPAWMPVLS 213

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D                  +I+           RLSDH P+  ++
Sbjct: 214 MDRIYYRG-----------LDIIDCNRLHGQPWHRLSDHIPLLAEF 248


>gi|160889048|ref|ZP_02070051.1| hypothetical protein BACUNI_01468 [Bacteroides uniformis ATCC 8492]
 gi|156861515|gb|EDO54946.1| hypothetical protein BACUNI_01468 [Bacteroides uniformis ATCC 8492]
          Length = 335

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/341 (11%), Positives = 89/341 (26%), Gaps = 57/341 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46
           M +  VL   +  V    +   +     +  +N+  L +    +   +           +
Sbjct: 1   MRKLLVLCSFWLCVATLGAQNAERKLYSVAFYNLENLFDTIHDAGKNDYEFLPNGSYQWT 60

Query: 47  VKRTTSDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
            K+  S    L +   +L  D+       + + E  +   +  +  +     +       
Sbjct: 61  AKKYESKLQNLSKVLGSLSRDLVPEGPAFIGVAEAENSRVLEDLVKQPAISNYEFVHYEG 120

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                     I  A+    K   V      L    +  +    R  + +  ++ G+++ V
Sbjct: 121 P-----DRRGIDCALLYDPKQFSVTHSKLVLSTPFEGDTVHLTRGFLIVDGQLAGERVCV 175

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S           SP     ++Q + LKD + +  +  +  ++ GD N       
Sbjct: 176 IVNHWPSR-------GAKSPVRVHAARQVKALKDSLMR-SDKKLKLIVMGDMNDDPMDES 227

Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                      +          +   +D               D  V+ +   K      
Sbjct: 228 MEVLGARKYPKQVKKGEFYNPWWVTLEDKGVGTLLYRGKWNLFDQIVISKPLLKAKKGLR 287

Query: 275 FSEI------------------LYNEDDIKSRGKRLSDHCP 297
           +                            ++     SDH P
Sbjct: 288 YDHNEVFIRDYLIQQDGKYKGSPLRTHGGRTWLNGYSDHLP 328


>gi|224498832|ref|ZP_03667181.1| hypothetical protein LmonF1_03653 [Listeria monocytogenes Finland
           1988]
          Length = 256

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 78/285 (27%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +  +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++      +         P + +  S +    R
Sbjct: 54  KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     +++GK+ ++ + HL                       A  L           
Sbjct: 113 ICVWGKFADLDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAEN 159

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259
            P +I GDFN + +    N    K  D      +  K      +  + LR       IDY
Sbjct: 160 SPVIILGDFNTEPDTPTYNFITKKYQDAQLISQKRAKGPIGSFHDFRPLRPINELEKIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             + +          F    Y     +  G   SDH P++ + D+
Sbjct: 220 IFVSEE---------FQVCTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|297198840|ref|ZP_06916237.1| large secreted protein [Streptomyces sviceus ATCC 29083]
 gi|197711239|gb|EDY55273.1| large secreted protein [Streptomyces sviceus ATCC 29083]
          Length = 607

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/327 (11%), Positives = 87/327 (26%), Gaps = 68/327 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ + ++N+  L   +                + +    K+   DIV L+E+   N   
Sbjct: 301 GELAVATYNVENLDPTDATF---------EEHASAIVNNLKS--PDIVSLEEIQDNNGAK 349

Query: 82  K------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
                                    +    S +   +    +   +I        + V  
Sbjct: 350 DDGTTAADVTVTKLIDAIVAAGGPKYDW-RSIDPANDTDGGEPGGNIRQVFLFNPERVSF 408

Query: 124 LQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
             ++                      P   A    +   +R+ +       G+ ++V+  
Sbjct: 409 TDRAGGDATTAVGVTKVHGKAQLTASPGRIAPTDEAWKSSRKPLAGEFVFRGRTVFVIAN 468

Query: 163 HLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKIN 216
           H  S      L +   P    S     QQA  +  ++    +       +  GD N    
Sbjct: 469 HFNSKGGDFGLTSATQPVPRSSEIQRHQQATLVNAFVKDILDTQKNADVIALGDINDF-- 526

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKE-KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                 D  K ++ +  L    K    S         N+  +D  ++  +  +       
Sbjct: 527 ---EFSDTAKILEGDGELWSAIKSLPRSERYTYDYQGNQQVLDQILVSPSIRRGCDFA-- 581

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                +         ++SDH P  + +
Sbjct: 582 ---YDSVHINSEFNDQISDHDPQVLRF 605


>gi|262198893|ref|YP_003270102.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
 gi|262082240|gb|ACY18209.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
          Length = 300

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 85/286 (29%), Gaps = 60/286 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A V ++VR+ +WN+                    S    L +  + +DAD+V LQE+   
Sbjct: 59  APVPERVRVATWNV---------------AIAGFSSIDTLARELREIDADVVLLQELEVG 103

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              +    +                     +     + V  +      + + L    D  
Sbjct: 104 ARRSGRVNQPRALAEAMGMDYAFAPSV-PYDGGIFGLTVLTRLPLARAERHSL----DGE 158

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A E+       ++ ++D+H +     ++                  L + I  
Sbjct: 159 IVYEPRIAFEVGACAGALELRLIDVHAEYVPETNTDN-------------LARLAELIGP 205

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P  +AGD N +    G        +     +  F +E              I I
Sbjct: 206 V--GDQPIAVAGDLNTRPANAGIV----ALLADTGLVDLFHEEGGEPA---------IYI 250

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           DY +      + +++ES                  SDH P+ +++D
Sbjct: 251 DYVLASPPLAE-IVRESVRV-----------DSDASDHAPLWVEFD 284


>gi|254386823|ref|ZP_05002112.1| sphingomyelinase C [Streptomyces sp. Mg1]
 gi|194345657|gb|EDX26623.1| sphingomyelinase C [Streptomyces sp. Mg1]
          Length = 334

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 84/296 (28%), Gaps = 31/296 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S+N+      + +        R T        + +    D+V LQE     A   +
Sbjct: 48  LSVLSYNV--FLMSKSLYPNWGQDHRATEIPK--ASFYQGH--DVVVLQEAFDNGASDAL 101

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAKD 135
              +     Y T  +                       + V  K   V ++      A  
Sbjct: 102 KANSAAQYPYQTPVVGRSKSGWDATGGSYSATTPEDGGVTVLSKWPIVRKEQVVYKDACG 161

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +   + N+    +++ +NG ++ V+  H +S             +  + ++Q + +  ++
Sbjct: 162 ADWWS-NKGFAYVVLNVNGARVHVVGTHAQSTDPGCGAG----EAAQMRARQFKAIDAFL 216

Query: 196 T-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANK 249
             +   +    ++AGD N                                      N   
Sbjct: 217 DGKNIPASEQVIVAGDMNVDSRTPEYASMLANADLAGSDTRTGHPYSFDTALNSIANYRY 276

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------KRLSDHCPIS 299
               +  +DY +  +   +    E+      +     S          LSDH P+ 
Sbjct: 277 PTDPREDLDYVLYRKGNARPANWENNVVKEQSAPWTVSSWGTSYTYTNLSDHYPLI 332


>gi|66817330|ref|XP_642518.1| hypothetical protein DDB_G0277701 [Dictyostelium discoideum AX4]
 gi|161784257|sp|P51173|APEA_DICDI RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=Class II apurinic/apyrimidinic(AP)-endonuclease
 gi|60470608|gb|EAL68586.1| hypothetical protein DDB_G0277701 [Dictyostelium discoideum AX4]
          Length = 361

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 82/309 (26%), Gaps = 77/309 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAV 80
            +++++SWN+                           +Y +  + D++ LQE   + + +
Sbjct: 103 NQMKIISWNVAGFKSVLSKGF---------------TEYVEKENPDVLCLQETKINPSNI 147

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K      +   +       H          T +  +KK   +        G   +    
Sbjct: 148 KKDQMPKGYEYHFIEADQKGHHG--------TGVLTKKKPNAIT------FGIGIAKHDN 193

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     ++ +   + ++++ ++ +          Y      +  QA        +K  
Sbjct: 194 EGR-----VITLEYDQFYIVNTYIPNAGTRGLQRLDYRIKEWDVDFQA------YLEKLN 242

Query: 201 SLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +  P +  GD N     +                     +        +  +      + 
Sbjct: 243 ATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERTSFSNFLEKGYVDSYRHFNPGKE 302

Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            +                  +DYFV+ +     +    F                 SDHC
Sbjct: 303 GSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMDSIKISPFH----------RTSVMGSDHC 352

Query: 297 P--ISIDYD 303
           P  + +D +
Sbjct: 353 PIGVVVDLN 361


>gi|254788112|ref|YP_003075541.1| endonuclease/exonuclease/phosphatase family protein [Teredinibacter
           turnerae T7901]
 gi|237685110|gb|ACR12374.1| endonuclease/exonuclease/phosphatase family protein [Teredinibacter
           turnerae T7901]
          Length = 250

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 96/291 (32%), Gaps = 52/291 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSY 77
            A+KV++++ N++                        LR+  + +D D+VFLQE+     
Sbjct: 2   SARKVKILTVNMHKGFNAFNRRFT----------LHELREALREIDPDVVFLQEVLGEHR 51

Query: 78  NAVAK---VFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
               +   ++P+ +   F + +    H+          H   A+  +       ++ +  
Sbjct: 52  QFATRYTDLWPEQSQYEFLADQVWSAHAYGRNAVYPHGHHGNALLSRFPIDRWHNHDI-- 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              S S    R  +   + +  +K+  + +HL                 S    Q + L 
Sbjct: 110 ---SLSGIEKRGLLYCHLNLGEQKLHAICVHLSLR-------------ESHRQIQLKRLS 153

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             +     +  P V+AGDFN                + +  +  +   +     +     
Sbjct: 154 KLVNS-LPADEPVVVAGDFND-----WRLKAENLLFNESRLVDAYTGHQGKPARSFPVAM 207

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +D   +  N+   +           E   +S   R+SDH P+ ++ D
Sbjct: 208 PLLRLDRIYLRCNSRYEI-----------ERLHRSPWSRISDHKPLMVELD 247


>gi|281177926|dbj|BAI54256.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE15]
          Length = 253

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +        ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGESVLVAGDFNDWRQKANHPLKVLAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|153806752|ref|ZP_01959420.1| hypothetical protein BACCAC_01023 [Bacteroides caccae ATCC 43185]
 gi|149131429|gb|EDM22635.1| hypothetical protein BACCAC_01023 [Bacteroides caccae ATCC 43185]
          Length = 366

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 88/299 (29%), Gaps = 68/299 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++N++  +            + T      +    +NL ADI+  QE      +   
Sbjct: 110 LTVATYNVDGFN-----------REHTGYSCKEIAAQMRNLKADILCFQEF----GIDDE 154

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F  ++ C   S      +            +AV  +     +       + +        
Sbjct: 155 FGVDSLCTALSDWPYH-YIPSSPERQHLLQLAVFSRYSIKKEHLIIYPNSGNCS------ 207

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP----------------------SC 181
             +   +E+NG+ I + + HL++     +                             + 
Sbjct: 208 --LWCDIEVNGRMIRLFNNHLQTTEVSRNKRKLEKELRQDNSQRAKRAALTLADGLHENF 265

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
              + QA ++   ++    S  P ++ GDFN   +    +     T+  +  L  F    
Sbjct: 266 RKRAVQANFINQLVSA---SPYPTLVCGDFNSLPSSYVYH-----TVKGDKLLDGFQTGG 317

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                  K  ++ + IDY +                      D  S     SDH P+ +
Sbjct: 318 HGYMYTFKYFKHLLRIDYILHSPEL--------------KGLDYFSPDWEYSDHNPVVM 362


>gi|145354287|ref|XP_001421421.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|145354354|ref|XP_001421452.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581658|gb|ABO99714.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581689|gb|ABO99745.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 401

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 95/332 (28%), Gaps = 53/332 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +  +A  +   R++++N+   +           +  ++ +      L+ +      AD+V
Sbjct: 78  LEPSAETSADYRIMTYNVLADAYAHTWGTMFPYFDTALAKVERRLQLVLEDILRSKADVV 137

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+          P  T   + +T+ +    +      +  A++  +   R       
Sbjct: 138 ALQEVDKKYHETLFVPVLTANGYIATDWVGKSGQTLEGCAMFFALSKFESIEREEAIKLT 197

Query: 130 LLGAK------DSFSRAGNRRAV----------ELLVEINGKKIWVLDIHLKSFCFLDSL 173
            +G K           A    A+           + V  +GK + V + HL         
Sbjct: 198 EIGDKALRRWIADDDNAELAMALKKITSIAQLARVKVRASGKSLCVGNTHLFFHPG---- 253

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------YLGNN 221
                 +  L   QA       T       P V+ GDFN +                 + 
Sbjct: 254 ------AMHLRVLQAHEFTTRATAFAA-GDPLVLCGDFNGEPEDGVIRYLTKGEISASDE 306

Query: 222 DDFWKTIDPNDSLIRFPKEKDSR---------CNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
           D    ++     +      + +R            N        +DY     + +     
Sbjct: 307 DWVRGSLFRAVPIGCGAHLRTARPLFSAGGFLEWTNYVGGFVGALDYVWCSTSDFASRAT 366

Query: 273 ESFSEILYN-EDDIKSRGKRLSDHCPISIDYD 303
               ++            +  SDH P+ +D D
Sbjct: 367 SPLPDMSAVLAHTALPNAQFPSDHIPVIVDVD 398


>gi|91776730|ref|YP_546486.1| endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus
           KT]
 gi|91710717|gb|ABE50645.1| Endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus
           KT]
          Length = 251

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 81/286 (28%), Gaps = 47/286 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI+                         R+  + L AD+VFLQE+   +     
Sbjct: 5   IRIATFNIHKGVTSFNARFA----------LHEQRELIRKLQADVVFLQEVRDQHIKHSR 54

Query: 84  ------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                        +  +      + K       H   A+  K   V  ++  +       
Sbjct: 55  RFSAWPLAGQVEFLADAVWSDYAYGKNSVYPAGHHGNALLSKYPIVKYENIDISA----- 109

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            ++  R  +   + + G    +  I +    F                +Q   L+  I +
Sbjct: 110 HQSEQRGMLHGEIAVPGWHQPLHCICVHLGLFAG-----------WRRKQIAILRKQIEE 158

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P VIAGDFN      G   +    +   +        K +R   +        +
Sbjct: 159 VVPKDAPLVIAGDFNDWSMSAG--RELVHGLHLQEVFEHHSGGKPARSFPSFLPLF--RL 214

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +               + + E     +  ++SDH  ++    
Sbjct: 215 DRIYVRG-----------FHVRHVEVHAGPQFMKVSDHAALTAVLS 249


>gi|154304302|ref|XP_001552556.1| hypothetical protein BC1G_08421 [Botryotinia fuckeliana B05.10]
 gi|150854223|gb|EDN29415.1| hypothetical protein BC1G_08421 [Botryotinia fuckeliana B05.10]
          Length = 742

 Score = 85.4 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 43/353 (12%), Positives = 83/353 (23%), Gaps = 60/353 (16%)

Query: 11  FFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
                  A   ++  + S+NI  +            +           +    +  DAD 
Sbjct: 363 LLNGTTVAPDIERFTVFSYNILCDNYVGPGQYGYVPSKALDWEHRRHEILCEIEERDADF 422

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVL 124
           V LQE+ + N       K  +  +       + +K  S +        A   +     +L
Sbjct: 423 VCLQEVDAENFREFFSVKLAYKDYKGVWWPKSRAKTMSESAAKAVDGCATFYKNNKFILL 482

Query: 125 QQSYPLL-----------GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHLKSFCFLD 171
            +                   D F+R   R   AV    E       V+  +   F    
Sbjct: 483 DKQLIDFANIAINRPDMKNQHDIFNRVMPRDHIAVLAFFENRLTGSRVIVANAHIFWDPA 542

Query: 172 SLENTYSPSCSLLSQQAQWLKD----------------WITQKKESLVPFVIAGDFNRKI 215
              + Y    +   ++A  + D                 +    ++ +P ++ GD N   
Sbjct: 543 KFADKYQRFPACKDKKAYTIADDSDPDTPVEVAPEPAPSMEYTNKTQIPLIVCGDLNSTS 602

Query: 216 NYLGN------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           +                             D          +              N   
Sbjct: 603 DSSVYELLATGRVAPDHPDLGNYQYGNFTRDGIEHPFSLRSAYSNLADGPQELTWTNYTP 662

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDYD 303
                ID+     NA +        +  Y             SDH  +   ++
Sbjct: 663 GFTDHIDHIWYSTNALENTDLLGPVDEEYMRTVPGLPHYHFPSDHLALLARFN 715


>gi|124087428|ref|XP_001346851.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145474943|ref|XP_001423494.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057240|emb|CAH03224.1| Conserved hypothetical protein with homology to transcriptional
           regulator [Paramecium tetraurelia]
 gi|124390554|emb|CAK56096.1| unnamed protein product [Paramecium tetraurelia]
          Length = 326

 Score = 85.4 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 88/306 (28%), Gaps = 35/306 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + ++S+NI      +         +  + ++  T + +  K  + DI  LQE+ + + 
Sbjct: 31  HAISILSYNILAAIYCDQSQTGYAQNQYLKFSNRSTKIIEQLKIFNVDIFCLQEVDNIDF 90

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +   K  + I +            +         + K +   L +     G    + R
Sbjct: 91  YQERIKKLNYEICFVQRPQRPDGCLIAFKVDK--FKLLKSSEYSLDKMAINYGLPLQYQR 148

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
               + V L   +  K++ + +IH       D L+           Q  Q ++    +K+
Sbjct: 149 QNVFQIVILEHILTKKQLVIGNIHTFWNPNQDDLKY---------FQIVQLVQKMEAEKE 199

Query: 200 ESLVPFVIAGDFNRKINYLGNN-------------------DDFWKTIDPNDSLIRFPKE 240
                 +  GD N   +                            +  +         + 
Sbjct: 200 SDDQILIFCGDLNSLPHSNPIQYIQKNKPIVERIEKSSNQIKLQKEIFEHYGPPKLNWQS 259

Query: 241 KDSRC--NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                    N     K  IDY     NA    I     E +  ++         SDH PI
Sbjct: 260 AYHPFPKFTNYTTDFKGCIDYIFY-HNANVEKILRLPEESVLQQEVALPNRNFPSDHLPI 318

Query: 299 SIDYDF 304
              +DF
Sbjct: 319 LASFDF 324


>gi|302885025|ref|XP_003041406.1| hypothetical protein NECHADRAFT_54419 [Nectria haematococca mpVI
           77-13-4]
 gi|256722307|gb|EEU35693.1| hypothetical protein NECHADRAFT_54419 [Nectria haematococca mpVI
           77-13-4]
          Length = 297

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 89/309 (28%), Gaps = 32/309 (10%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           + +   +      +     K  L+++N+  L      +          ++   +      
Sbjct: 9   QLLTVALCLSGLSSGQATGKFDLLTYNVAGLPPILNNNEVPGDKG---TNANTIGSILAK 65

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
              D+V +QE  +Y+A         +       R          + ++T       N   
Sbjct: 66  QAYDVVHMQEDFNYHA-------YIYKTDNHPHRTPTSGGVPFGDGLNTVANYNWANFAR 118

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            + +   L + D  +    +    + + I+G ++ + ++H  +                 
Sbjct: 119 KKWNKCNLNSGDCLT---PKGFTYMRMTIDGIEVDLYNLHADAGS--------DKGDIDA 167

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL--GNNDDFWKTIDPND------SLI 235
            S     +  W+        P +IAGD N +        N         +          
Sbjct: 168 RSAGIDQILAWVNSN-SKGKPVIIAGDTNDRWANSGRSINKLTDAGFTDSWVQLIRSGSY 226

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    C           +D           L   SF+    ++  +++ G  LSDH
Sbjct: 227 PQAGATADPCKVPAADNKCEIVDKVFYRSGDSVKLTATSFN--YASKVFVQADGNILSDH 284

Query: 296 CPISIDYDF 304
            PI +++ +
Sbjct: 285 NPIHVEFSW 293


>gi|253566553|ref|ZP_04844006.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251944725|gb|EES85200.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 608

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 88/305 (28%), Gaps = 67/305 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK +L L   L   +A     +RL+++N+   +  +G+            +Y  +    
Sbjct: 1   MRKLLLLLFSALFVLSAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVI 49

Query: 62  KNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   DIV +QE+ S  A +    V  +                     +     I +  
Sbjct: 50  NNARPDIVAIQELDSMTARSNRTDVLKELAERTQLHPCFAPAID----YDGGKYGIGILS 105

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +  Q++ L G      R   R  +         +      HL              
Sbjct: 106 KETPLRVQTFALPG------REEPRTLLVAEFP----EYVFACTHLSLTEED-------- 147

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIR 236
                   + + L+   +    +  PF +AGDFN   +     D    ++ +        
Sbjct: 148 --------RMKSLEILKSVTANTRKPFFLAGDFNSDADSGFIKDLKSTFQILS------- 192

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                            K  +DY +  +      +  S   I              SDH 
Sbjct: 193 ---NPKQPTYPAS--EPKETLDYLIALKQETPTFVVNSARVI---------DEPLASDHR 238

Query: 297 PISID 301
           P+ ++
Sbjct: 239 PLLVE 243


>gi|170780681|ref|YP_001709013.1| putative exonuclease [Clavibacter michiganensis subsp. sepedonicus]
 gi|169155249|emb|CAQ00350.1| putative exonuclease [Clavibacter michiganensis subsp. sepedonicus]
          Length = 278

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 78/302 (25%), Gaps = 59/302 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +    D D++ +QE+         
Sbjct: 1   MRVATWNVN----------------SIRTRVGRVVDWLVREDVDVLAMQEIKCK------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +     ++            +A+  +       +      +     A  +
Sbjct: 39  ----PEQFPMAAFEEADYEVAVHGLSQWNGVAIASRLPLEDVVTTFEGMPRFGKPDATGQ 94

Query: 144 RAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +E          + +  +++ +   LD    +Y      L   A   + W+    +  
Sbjct: 95  PPLEARAMGATVAGVRLWSLYVPNGRALDDPHYSYK--LEWLQALAADTRAWLA--ADPA 150

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P  + GD+N                  +        +                      
Sbjct: 151 TPLALMGDWNVAPLDTDVWDPALFEGKTHTSEPERAAFAAFLDAGLADVVRPSIPEGYTY 210

Query: 248 NKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               + +      + ID+ + +    + +               + +G   SDH P+++D
Sbjct: 211 WDYQQLRFPRNEGMRIDFILGNDRFSELVGAPRIH-------RDERKGDGPSDHVPVAVD 263

Query: 302 YD 303
            D
Sbjct: 264 LD 265


>gi|332886426|gb|EGK06670.1| hypothetical protein HMPREF9456_00544 [Dysgonomonas mossii DSM
           22836]
          Length = 384

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 93/309 (30%), Gaps = 67/309 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSYN 78
           ++++++N+   +  +G +   N           +  Y  N +ADI+ LQE       S N
Sbjct: 112 IKVLTYNVRAFNWAKGEAARNNP----------ILDYLVNSNADIICLQEFAVSPSNSKN 161

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             + +                      S  ++   +A   K      +  PL  + +  +
Sbjct: 162 KKSIISEVEIKQKLKDYPYSRIIKLGSSRGNLIYGLACFSKFPIEKAERLPLESSYNGSA 221

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP------------------- 179
                      + IN KK+ +++ HL+S       +  Y                     
Sbjct: 222 MYE--------LIINKKKVTLVNNHLESNRITSEDKKLYKEFFKTRDREMIGEVAMNVQT 273

Query: 180 ----SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               +  +   QA+ ++  I ++       ++ GDFN              TI  ++ + 
Sbjct: 274 RLGAAYKIREAQAKIIRSIIDKQ--ETDATIVCGDFNDSPISYAYY-----TIKGDNLVD 326

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +      +       +    ID+ +                + +   +      + SDH
Sbjct: 327 SYANTGFGQGITYHENKFWFRIDFIMHS--------------MAFQSYNCTVDKIKYSDH 372

Query: 296 CPISIDYDF 304
            P+     F
Sbjct: 373 YPVWTYLAF 381


>gi|327399082|ref|YP_004339951.1| exodeoxyribonuclease III Xth [Hippea maritima DSM 10411]
 gi|327181711|gb|AEA33892.1| exodeoxyribonuclease III Xth [Hippea maritima DSM 10411]
          Length = 258

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 80/304 (26%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++VSWN+N                   +   L+  + K    D++ +QE    N +   
Sbjct: 3   FKVVSWNVN----------------SIRARLELVLDFLKANQPDVLCMQETKVENVL--- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++   +       +A   K      ++      KD       +
Sbjct: 44  -------FPKEAFEELGYNVATAGQKRFNGVATVSKLNLEDIKTDFFDAEKDHKRSLLTK 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                        I +++++  +    D+ +  Y  +          LK ++++      
Sbjct: 97  I----------NDITIINLYFPNGQAPDTEQFQYKLNF------IYELKSFLSKHYSIED 140

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN  +      D                  K +     +  F K       A 
Sbjct: 141 KLIILGDFNVAMEENDVYDVKQMEGKIGFHPEERKALKELYSWGFVDLFRKFNKE--KAF 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY                       D    R K+ SDH P+ 
Sbjct: 199 SWWDYRAASFWKDRGLRIDYIWSTPTLADKCKDCFI-------DKSYRRKKKPSDHAPVV 251

Query: 300 IDYD 303
             ++
Sbjct: 252 AVFE 255


>gi|139439406|ref|ZP_01772847.1| Hypothetical protein COLAER_01867 [Collinsella aerofaciens ATCC
           25986]
 gi|133775185|gb|EBA39005.1| Hypothetical protein COLAER_01867 [Collinsella aerofaciens ATCC
           25986]
          Length = 272

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 74/308 (24%), Gaps = 63/308 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            Q     SWN+N L                        Q A+ LD DI+ LQE       
Sbjct: 2   PQTYTFASWNVNGLRAVLKKDPSF-------------IQIAQELDVDILALQETKLQEGQ 48

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +     +   +S      +S     +         +    +   +          +  
Sbjct: 49  VDI-DLPGYHQTWSYAERKGYSGTAVFSRQ-------EPLRVLRADALLPYAGGGEAAVL 100

Query: 141 GNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             + A E  V      K W +D++  +     +  +               L+       
Sbjct: 101 VAQAATEGRVCALEFDKFWFVDVYTPNAQNELARIDVRMAWDDAYRGFLNALER------ 154

Query: 200 ESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           E+  P V  GDFN                           +  +        +       
Sbjct: 155 ETGKPVVTCGDFNVAHEEIDLKNPKSNRGNAGFSDEERGKFTELLNAGFTDTWRAANPDV 214

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDYF++  +    +            D         SDH
Sbjct: 215 EGVYSWWSYRFNARKNNAGWRIDYFLVSDSIAANVR-----------DTGIRGDIFGSDH 263

Query: 296 CPISIDYD 303
           CP+++  +
Sbjct: 264 CPVTLTLE 271


>gi|118588886|ref|ZP_01546293.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614]
 gi|118438215|gb|EAV44849.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614]
          Length = 238

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 76/281 (27%), Gaps = 54/281 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NI            K+             +  + LD DI+ LQE        + 
Sbjct: 2   LKIGSYNIQ-----------KSIGVDARRRPDRTLKVIQELDCDILALQEADKRFGPRES 50

Query: 84  -FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              + T         +   +   S      AI VR     +  +   L            
Sbjct: 51  TLDRETILHETDYRPVPFATGDKSLGWHGNAILVRNSIGILDHRRLDLPTL-------EP 103

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV + + + G+KI V  +HL                 + L  Q     D++       
Sbjct: 104 RGAVAVDLLVAGEKIRVAAMHLSLIGHF------RKKQITSLMHQLHEHLDYL------- 150

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+ GD N   +   +   F +             E  +   +  +      +D  + 
Sbjct: 151 -PTVLIGDLNEWRDSADSIKLFEE-----------RYEVTTPGRSFPSPLPVGSLDRIIT 198

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                      +  SDH P+  +  
Sbjct: 199 SPEFIVRQAGV----------HKSKTARIASDHLPVWANLT 229


>gi|126698940|ref|YP_001087837.1| putative exodeoxyribonuclease [Clostridium difficile 630]
 gi|254974886|ref|ZP_05271358.1| putative exodeoxyribonuclease [Clostridium difficile QCD-66c26]
 gi|255092273|ref|ZP_05321751.1| putative exodeoxyribonuclease [Clostridium difficile CIP 107932]
 gi|255100359|ref|ZP_05329336.1| putative exodeoxyribonuclease [Clostridium difficile QCD-63q42]
 gi|255306301|ref|ZP_05350472.1| putative exodeoxyribonuclease [Clostridium difficile ATCC 43255]
 gi|255314013|ref|ZP_05355596.1| putative exodeoxyribonuclease [Clostridium difficile QCD-76w55]
 gi|255516693|ref|ZP_05384369.1| putative exodeoxyribonuclease [Clostridium difficile QCD-97b34]
 gi|255649791|ref|ZP_05396693.1| putative exodeoxyribonuclease [Clostridium difficile QCD-37x79]
 gi|306519893|ref|ZP_07406240.1| putative exodeoxyribonuclease [Clostridium difficile QCD-32g58]
 gi|115250377|emb|CAJ68199.1| Exodeoxyribonuclease [Clostridium difficile]
          Length = 250

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 82/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +    G                    + K +DADI  LQE          
Sbjct: 1   MKFISWNVNGIRACVGKGF---------------LDFFKEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                                    +   +
Sbjct: 45  LDLPGYFQYWNYAERKGYSGTAIFTK-----------------------------KEPLK 75

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKES 201
               + +E + K+  V+ +  + F F+             L  + +W  D+I    K ++
Sbjct: 76  VMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYRTRWEDDFIDYLTKLDN 135

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++ GD N                         + +  +  +  +  +      +  
Sbjct: 136 HKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKFSKLLDSGFIDTYRYFNPDKEG 195

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF   +     L+       +             SDHCP
Sbjct: 196 VYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADIHTEIL-----------GSDHCP 244

Query: 298 ISIDY 302
           + ++ 
Sbjct: 245 VELEI 249


>gi|301766552|ref|XP_002918698.1| PREDICTED: endonuclease/exonuclease/phosphatase family
           domain-containing protein 1-like [Ailuropoda
           melanoleuca]
 gi|281339468|gb|EFB15052.1| hypothetical protein PANDA_007201 [Ailuropoda melanoleuca]
          Length = 569

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 81/296 (27%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVR-KKNVRVLQQSYPL 130
             +    I  +  +                          +         V +   +   
Sbjct: 312 CTELNQPILPNIRKWKGPRGCWKAAVADMPSTQLQKGAGFSGFLWDATAGVELRDSTSQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +         + + S S        
Sbjct: 372 SSPGNGHGKPMGPSPYLARFKVGSNDLTLVNLHLATSTLPGGENLSRNHSDSHR---LAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     ++ GDF +  +    +      +         P    +   + KN
Sbjct: 429 FVQTLQETLKGEKDMIVLGDFGQGPDSSDYD-----ILRKEKFYPLVPAHTFTNI-STKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  ++
Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 538


>gi|262166640|ref|ZP_06034377.1| extracellular nuclease-related protein [Vibrio mimicus VM223]
 gi|262026356|gb|EEY45024.1| extracellular nuclease-related protein [Vibrio mimicus VM223]
          Length = 734

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 50/373 (13%), Positives = 91/373 (24%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  S+          +      LDADIV L E
Sbjct: 338 GDLRIATFNVLNYFNSPFGGDANQHGGNRGASNLAEFEVQQAKIVNAIVRLDADIVGLME 397

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 398 IENNGFGEGSAIAQLVNQLNSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 457

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V+++Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 458 RDKVVKLVQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 517

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           HLKS         +       +   L  Q                   +     VI GD 
Sbjct: 518 HLKSKGSACWEDAAPVEQGGQAGQDLDFQGACENFRVAAAVALGDALAKIDGHKVILGDM 577

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 578 NSYGMEDPMLILTDYTPEKYGKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAMKHP 637

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 638 DSWSYSFNDEVGALDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYNDQF 697

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 698 RASDHDPAVLELN 710


>gi|260172525|ref|ZP_05758937.1| hypothetical protein BacD2_11731 [Bacteroides sp. D2]
 gi|315920818|ref|ZP_07917058.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694693|gb|EFS31528.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 299

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 83/314 (26%), Gaps = 48/314 (15%)

Query: 5   YVLALVFFLVPCTA-------------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           ++L+  F     +              + +  + +  +NI   + ++G  +W N      
Sbjct: 12  FLLSFFFIGCSNSTIEDEPEMPPFNNETPSNSLCVAQFNIRYDTPEDGQYVWANRKTMAK 71

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                  +   + D DI  + E    N +  +     +    +       +         
Sbjct: 72  -------EIITSHDFDIFGVNECL-LNQLNDLLELKQYEYIGTGRDDGKEAGEFCPILYK 123

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
                +++   +    +      D  S++ N     +                    F  
Sbjct: 124 -----KERVELLYHGQFWYSETPDKPSKSWNSFCNRICTWGK------FKDKKTDKDFFF 172

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
              +    S       A+ L   + +     +P+   GD N   +    +      +   
Sbjct: 173 FSSHFDHVSNEARVNSAKLLVQKVQEIAG-DLPYFCTGDLNCDPDEEPISFILNSGLF-K 230

Query: 232 DSLIRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNE-DDIK 286
           DS                           IDY ++         ++S   + +    D  
Sbjct: 231 DSYSISETTPKGPAGTLHYWNFDFNPEHRIDYILV---------EKSIKVLSFETITDDA 281

Query: 287 SRGKRLSDHCPISI 300
            +G+  SDH PI I
Sbjct: 282 RQGRFSSDHYPIMI 295


>gi|209542628|ref|YP_002274857.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209530305|gb|ACI50242.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 258

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N                        +  + +    D++ LQE+   +A    
Sbjct: 1   MKIASWNVN----------------SVRQRQAHVLDWLEREKPDLLGLQEIKCEDAA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142
                        R   +         +  +A+  +    V  ++ P L  +   +R   
Sbjct: 42  -------FPAEAFRAAGYDCVVVGQKSYNGVAILSRLPFSVTARALPFLDGEALQAR--- 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                + +E  G  +   +++L +     S       +        + L        E+ 
Sbjct: 92  ----YVEIEAGG--LTFGNLYLPNGNSGGSAGYEAKLAF------MEALALHARALLEAG 139

Query: 203 VPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             FV+AGD+N                       +   ++ +                   
Sbjct: 140 RDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAAFRRLIWLGLTDALRALHPHGRYY 199

Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID+ ++     + L            D  +    + SDH P+ 
Sbjct: 200 TFWDYQAGAWPRDCGLRIDHALLSPRIAERLDSA-------QPDRDERGRAQPSDHVPLV 252

Query: 300 IDYD 303
           I  D
Sbjct: 253 ITLD 256


>gi|149187109|ref|ZP_01865414.1| metal-dependent hydrolase [Erythrobacter sp. SD-21]
 gi|148829261|gb|EDL47707.1| metal-dependent hydrolase [Erythrobacter sp. SD-21]
          Length = 233

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 79/280 (28%), Gaps = 53/280 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +   S+NI+           K        D   +      +DADI+ LQE        + 
Sbjct: 3   LTFASYNIH-----------KAVGLDRKRDPERILSVLHEIDADIIALQEADRRIGARES 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +         +    +  S      A+ VR+       ++  L            R
Sbjct: 52  CLPRSEIDDSHWRLVEVAKRPRSIGWHGNALLVRRNFEVHEGEALDLPTL-------EPR 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    + + G ++ ++  HL               S      Q + L  ++ +     +
Sbjct: 105 GAACGEITVEGHRLRIIGTHLDL-------------SGLRRRDQIRSLVGFVEKC-SRNL 150

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P VI GDFN+               + +D  +           +  + +    +D  V  
Sbjct: 151 PTVIMGDFNQW------GRATGAMREFSDRWLVVT-----PGRSYPSRQPVATLDRIVAS 199

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ++             +  E     +    SDH P+    D
Sbjct: 200 KH----------WGCVEAEVHHTGQSSVASDHLPVVATLD 229


>gi|254442161|ref|ZP_05055637.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
            bacterium DG1235]
 gi|198256469|gb|EDY80777.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
            bacterium DG1235]
          Length = 1171

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 103/312 (33%), Gaps = 32/312 (10%)

Query: 24   VRLVSWNINTLSEQEGVSLWKN-----SVKRTTSDYTLLRQYAK--NLDADIVFLQEMGS 76
            + + S N   L +        +     + +        L           +I+ +QE+ +
Sbjct: 848  LNVASLNTENLFDLIDDPDKNDQGSTPTPEELEIKLEKLSATIGIGLEFPEIICVQEVEN 907

Query: 77   YNAVAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRVLQ----QSYPLL 131
               +  +  +    + ++    +  S   S+   I T      + V++          + 
Sbjct: 908  QAVLQLLADRLNDKLPFARLDYLAVSLETSDNRGIETGYLYDSRRVKLEDLYQLTDEIVP 967

Query: 132  GAKDSFSR---AGNRRAVELLVEINGKKIWVLDIHLKSFCFLD----SLENTYSPSCSLL 184
            G  D+F     +  R  +  + +  G++I +++ H KS         + +     S    
Sbjct: 968  GVSDAFGATSVSKGREPLVGVFKSKGREITIVNNHFKSKGGDGPLYGTEQPPVRESEIQR 1027

Query: 185  SQQAQWLKDWITQKKESLVPFVIA--GDFNRKINYLGNNDD--FWKTIDPNDSLIRF--- 237
              QA  L+D+           ++A  GDFN          D      I+  +        
Sbjct: 1028 KLQATVLRDFADILLAENPNALLAITGDFNDFQFGEPGEGDSHTLGIIEGEEGEYPLENI 1087

Query: 238  --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KR 291
               +  ++   +     N   +D+F++ +   K L++  F  +     D         +R
Sbjct: 1088 VKTRIPENSRFSYVYEGNSQALDHFLLSKKLKKKLLRAEFIHLNAAYLDEFMEDASVLER 1147

Query: 292  LSDHCPISIDYD 303
             SDH P+ + ++
Sbjct: 1148 SSDHDPLLLKFN 1159


>gi|192289967|ref|YP_001990572.1| 5'-nucleotidase [Rhodopseudomonas palustris TIE-1]
 gi|192283716|gb|ACF00097.1| 5'-Nucleotidase domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 2775

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/342 (11%), Positives = 88/342 (25%), Gaps = 67/342 (19%)

Query: 22  QKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            ++++ S N+               +      ++          L     +++ D++ L 
Sbjct: 631 GRLKVASCNVLNYFATLDNGGTTAIDAAPRGADNAAEFARQTEKLVNTILDMNVDVLALT 690

Query: 73  EMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVL 124
           E+ +        NA+  +  +            ++   +    D I      +  +V++ 
Sbjct: 691 ELENDFSASSSGNAIKYLVDQLNGKAGAGVYAWVDPGHQFVGGDAIAVGFIYKTASVKIA 750

Query: 125 QQSYPLL-------------------GAKDSFSRAGNRRAVELLVE--INGKKIWVLDIH 163
             +                                 +R A+ +  E    G+    +  H
Sbjct: 751 DGTTVETLNDADLPGLGLGGLIGQSTVGAVFDGENTSRNALAVTFEEISTGETFTAIANH 810

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-------TQKKESLVPFVIAGDFNRKIN 216
           LKS     +  +          Q  + L                     ++ GDFN    
Sbjct: 811 LKSKSGTGTGVDADQGDGQGNWQNQRELAATALTAWAASDPTGSKDPDVMLLGDFNGYAQ 870

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                    K I+         +E      +         +DY   + +    +   +  
Sbjct: 871 EHST-----KIIETAGFENLHSRET--GAYSYVFDGQTGTLDYAFTNGSLGSQVSGVTTW 923

Query: 277 EILYNEDDIKSRG---------------KRLSDHCPISIDYD 303
            I  +E D+                    R+SDH P+ +  +
Sbjct: 924 HINADEADVLDYNTDYGRDTSIFDGSAPTRVSDHDPVVVGLN 965


>gi|170595251|ref|XP_001902307.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
 gi|158590094|gb|EDP28850.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
          Length = 391

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 80/296 (27%), Gaps = 36/296 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS N   L        W             + +     + DIV L+E+       ++
Sbjct: 5   LRVVSLNCWALPLP-----WPFRSSDHALRIKKIGEALLQNEYDIVALEEVWGEGDFLRL 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---RA 140
                           ++            +  R   V  L   + L G           
Sbjct: 60  ------QKALKDVYAYSYYFHSGFTGSGICVFSRHPIVSTLMHRFTLNGFAHHIHRGDWF 113

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G +    + +EI   +I     HL +    +               QA  L  ++     
Sbjct: 114 GGKGVGLVEIEIEQYRINFYAAHLHAEYDPNKDLY-----LPHRLAQAFELAQFVKHTSY 168

Query: 201 SLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           S    ++AGDFN + + L            D W     +         +   C   + L+
Sbjct: 169 SADALILAGDFNIEPDNLAYQLIMKNANLRDAWIQKPNSCDDCGATFGRLDNCYTPQRLK 228

Query: 253 ----NKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   +DY +     +   L          ++    +     SDH  I  ++ 
Sbjct: 229 NKKCYGKRLDYIMYRSGKSKIELKLCEIRMNRIHDQKSINY----SDHVGIYAEFS 280


>gi|117622972|ref|YP_851885.1| metal-dependent hydrolase [Escherichia coli APEC O1]
 gi|115512096|gb|ABJ00171.1| Metal-dependent hydrolase [Escherichia coli APEC O1]
          Length = 253

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + +  DIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSTDIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|257413807|ref|ZP_04744296.2| exodeoxyribonuclease III [Roseburia intestinalis L1-82]
 gi|257202214|gb|EEV00499.1| exodeoxyribonuclease III [Roseburia intestinalis L1-82]
 gi|291538795|emb|CBL11906.1| exodeoxyribonuclease III [Roseburia intestinalis XB6B4]
          Length = 256

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 73/306 (23%), Gaps = 78/306 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++L+SWN+N L                         +    DADI  +QE        
Sbjct: 3   NTMKLISWNVNGLRACIQKGF---------------LDFFHETDADIFCIQESKLQEG-Q 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
              P   +  +++           +    ++  A+  K   +       +   D   R  
Sbjct: 47  IDLPLPGYFSYWN----------YAKKKGYSGTAIFTKKEPLNVTYGIGIEEHDKEGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++ +     +++  +  +     +                + L        + 
Sbjct: 95  -------VITLEYPDFYMVTCYTPNSQNELARLPYRMQWEDDFRAYLKRL--------DG 139

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++ GD N                         +    +        F         
Sbjct: 140 SKPVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEEREKMTKLLDAGFTDTFRYFYPDTEQ 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF+  +     L        ++            SDHCP
Sbjct: 200 IYSWWSYRFRAREKNAGWRIDYFITSKRMNDKLTGAKIHTDVF-----------GSDHCP 248

Query: 298 ISIDYD 303
           + +D D
Sbjct: 249 VELDID 254


>gi|85096028|ref|XP_960186.1| hypothetical protein NCU09788 [Neurospora crassa OR74A]
 gi|28921667|gb|EAA30950.1| hypothetical protein NCU09788 [Neurospora crassa OR74A]
          Length = 622

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/334 (10%), Positives = 88/334 (26%), Gaps = 73/334 (21%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQE 73
            ++     + + ++N+  L+              T++    +           D++F+QE
Sbjct: 290 VSSGSCNGLTVGTYNVENLAP-------------TSAHMPKVASQIVKYLKSPDLLFIQE 336

Query: 74  MGSYNAVAKV------------------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           +                               T+  + + E + +        +I TA  
Sbjct: 337 VQDNTGATDDGVVSANKTLATLISAIQSAGGPTYD-YVTIEPVNDEDGGQPGGNIRTAYL 395

Query: 116 VRKKNVRVLQ-----------------------QSYPLLGAKDSFSRAGNRRAVELLV-- 150
                + +                         +  P      + +    R+ +      
Sbjct: 396 YNPSILSLKNPNPGSSTDANEVIVDAETGQPSLKFNPGRVDPLNAAWRATRKPLVAEWIA 455

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVP 204
           +   K  + +++H+ S     S+     P      +  +QQA+    +I++  + +    
Sbjct: 456 KDGKKPFFTVNVHMTSKGGGSSVHGDVRPPINGGVAKRTQQAEITAKFISKILQADPAAR 515

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            + AGDFN            +  +     L                  N   +D+  +  
Sbjct: 516 VIAAGDFNEFAFVKPL--TTFAEVSGLKELDEALNTPVENRYTYSYDMNAQALDHMYISP 573

Query: 265 NAY-KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                    +      +  D        +SDH P
Sbjct: 574 VLASSKSKFQHIHVSSWVTDSAV-----VSDHDP 602


>gi|228923803|ref|ZP_04087081.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228835932|gb|EEM81295.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 339

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 108/327 (33%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 37  ATGHEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 96

Query: 71  LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE+            +  + K  P         +   +    + N             +
Sbjct: 97  LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 151

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N GK + ++++HL +     
Sbjct: 152 STFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA----- 206

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK+++ +  E     ++ GD+N+ ++    +D  +    P 
Sbjct: 207 -----YDEGGKIRKQQVEYLKEYMNKHYEKGDYVIMGGDWNQLVSNAQLSDPKFVKERPE 261

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 262 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 319

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 320 KDLKFEN----------SDHNPVSAVF 336


>gi|229193352|ref|ZP_04320302.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
 gi|228590153|gb|EEK48022.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
          Length = 352

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 109/327 (33%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ANGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE+            +  + K  P         +   +    + N             +
Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N GK + ++++HL +     
Sbjct: 165 STFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA----- 219

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK+++ +  E+    ++ GD+N+ ++    +D  +    P 
Sbjct: 220 -----YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPE 274

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349


>gi|256377138|ref|YP_003100798.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
           43827]
 gi|255921441|gb|ACU36952.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
           43827]
          Length = 895

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 76/288 (26%), Gaps = 37/288 (12%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             TA+    +R+++WN            +   + RT     LL    +  DAD++ LQE+
Sbjct: 108 SGTAAPGASLRVLTWNTLW-------DKYNPELVRTARRRPLLLAELQVADADVIALQEV 160

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                +A +     W     T          S     T + +  +        +      
Sbjct: 161 EPE--LAAMLAAAPWVRERYTFDTAPT----SAAVGDTGLLLLSRVPVRESGRHAF---- 210

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                +  +    + VE     + V+  HL S    D      +   +            
Sbjct: 211 -----SRRKGLAAITVETAAGPVVVVSTHLTSDHSADGASRRRAELAAAAEV-------- 257

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           ++     +V      D            D W  +        F    +            
Sbjct: 258 LSGVDGEVVVVGDFNDGGPLPASALGARDAWVEVRGPGGAPTFDPATNPLAALGSLTGRS 317

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +D  ++  +A    +           D   + G   SDH  +  D 
Sbjct: 318 SRLDRVLLRGSARVEAVA-------LVGDVPTAAGLFASDHYGVRADL 358


>gi|298481071|ref|ZP_06999265.1| exodeoxyribonuclease III [Bacteroides sp. D22]
 gi|298272645|gb|EFI14212.1| exodeoxyribonuclease III [Bacteroides sp. D22]
          Length = 254

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L       L                ++    + DI+ LQE          
Sbjct: 2   MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +                +    ++ +A+  K        +   G          R
Sbjct: 39  LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKREP----DHVEYGMGMEAYDNEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D  +       +      +  + ++ + ++S  
Sbjct: 95  F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMGWLEDFQKYVMELQKSRP 142

Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD+N                         +   + +             + +   
Sbjct: 143 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDSFRTLCPEKQEYT 202

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R           IDY ++ +     L +        +           SDHCP+++
Sbjct: 203 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 251

Query: 301 DY 302
           + 
Sbjct: 252 EI 253


>gi|251779069|ref|ZP_04821989.1| exodeoxyribonuclease III [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243083384|gb|EES49274.1| exodeoxyribonuclease III [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 251

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/300 (10%), Positives = 76/300 (25%), Gaps = 78/300 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L                           K  +ADI  +QE           
Sbjct: 3   KLISWNVNGLRACVKKGF---------------LDILKESNADIFCVQESKLQEG-QIDL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
             + +  +++      +S     +                       G          R 
Sbjct: 47  NLDGYYDYWNYAEKKGYSGTAVFSKEKPLNISL--------------GIGIEEHDKEGR- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +  ++ ++++++  +     +  +      +        L             
Sbjct: 92  ----VLTLEFEEFYLVNVYTPNSQQKLARIDYRMAWENDFRHYLNELNK--------DKS 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GD N                         + +  +  +  +  +      +  A  
Sbjct: 140 VIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKFGELLKSGFIDTYRYFYPGKEGAYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ ++    L+  +    +             SDHCP+ +
Sbjct: 200 WWSYRFNARANNAGWRIDYFLVSKDFEDRLVDANIHTQI-----------EGSDHCPVEL 248


>gi|196046040|ref|ZP_03113268.1| putative secreted protein [Bacillus cereus 03BB108]
 gi|196023095|gb|EDX61774.1| putative secreted protein [Bacillus cereus 03BB108]
          Length = 264

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 89/292 (30%), Gaps = 42/292 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +R+ ++NI                         + +  +++   I+ LQE+ S   +
Sbjct: 5   SDILRIATFNIWN------------HESLWFERLEAICEEIRSISPHILALQEVRSSVNL 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +              ++  +     +A   K   + +++      ++S    
Sbjct: 53  NSKKNVAQY--IAGRIGYPFCIFKEYPDSPDEGLAFLSKIPIIAEEAIWETDIEESNYC- 109

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               A+ +     G K  V ++HL               S  +  +Q   + +WI  +  
Sbjct: 110 ----AIRITFTYKGCKFGVTNVHLNW------------KSSRIRQEQMNTVNNWIENRAS 153

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--KDSRCNANKNLRNKI--- 255
                ++ GDFN     + +     K            +        +  KN   K    
Sbjct: 154 DYE--LLCGDFNDDPFSMVHQYLIRKHWIDVAQFKEIEENMIAQPTLDYRKNPNLKDDVK 211

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                D+ ++ +NA         +  ++ E  + S G   SDH  + +D  F
Sbjct: 212 QEKRYDWIMIQENAAFEF-PTIENVSIFGESALTSTGMFPSDHYGVFVDLKF 262


>gi|254422509|ref|ZP_05036227.1| endonuclease/exonuclease/phosphatase family [Synechococcus sp. PCC
           7335]
 gi|196189998|gb|EDX84962.1| endonuclease/exonuclease/phosphatase family [Synechococcus sp. PCC
           7335]
          Length = 351

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 96/307 (31%), Gaps = 53/307 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----------M 74
            +VS+N+  LS     +  K       ++   + +  K L+ DIV LQE          +
Sbjct: 62  SIVSYNLGYLSGLTNNTTTKLECAAFDANQQQVIRALKELEPDIVALQEVDFGSKRSCYV 121

Query: 75  GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
               A+A+    +   I      +               + +  +   ++         L
Sbjct: 122 DQSKAIAQGLGLDFGAIAIGWDKNYVPFPYWPPAAHFGKMLSGQSTISRHPIQENSRIVL 181

Query: 131 LGAKDSFSRAGN----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
               D+          R A    ++   + + V+++HL++F            +      
Sbjct: 182 EKVADNPFYYNAFYLDRLAQVTQIQFGVQPLIVINVHLEAF------------NEPTRVS 229

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLI 235
           Q Q+++  + +      P ++ GDFN  +N     D              + +     + 
Sbjct: 230 QTQFVRS-LAEDYAKTYPVILVGDFNSALNRGTFIDASGANHGETQFSIKEMLASEVLVS 288

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             P+    +     + + +  +DY     N  + +  +             +     SDH
Sbjct: 289 AVPQSDWIKDLTFPSNQPEYKLDYIFYTPNTIEMVETQVV-----------AAAGEASDH 337

Query: 296 CPISIDY 302
            P+ + +
Sbjct: 338 LPVMMRF 344


>gi|157377075|ref|YP_001475675.1| endonuclease/exonuclease/phosphatase [Shewanella sediminis HAW-EB3]
 gi|157319449|gb|ABV38547.1| endonuclease/exonuclease/phosphatase [Shewanella sediminis HAW-EB3]
          Length = 885

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/387 (11%), Positives = 102/387 (26%), Gaps = 101/387 (26%)

Query: 19  SVAQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSD------------------YTLL 57
           +    +R+ S+N+  L   +   G  L      +  +D                   T +
Sbjct: 459 ATKGDIRVASFNVLNLFTSDSDIGGPLNATCEDQADADASRGCGRGAHSLDEYLLQRTKI 518

Query: 58  RQYAKNLDADIVFLQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRD 105
               K +DADIV L E+ +             N++    P      F        +    
Sbjct: 519 VNALKEMDADIVGLMEIENNGFSESSSIQYLLNSINAELPAIDAYKFIEIADADKYQGEF 578

Query: 106 SNND-IHTAIAVRKKNVRVLQQSYPLLGAKD------------------SFSRAGNRRAV 146
             +D I   I  R   V+    ++ +   +                          R ++
Sbjct: 579 VGSDAIMVGILYRPNKVKPAGDAFVIATPEQHAAEGVATRGEGDDVETSPSYNKYQRHSL 638

Query: 147 ELLVEINGKKIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWI 195
               +I+ +K+ ++  HLKS                   +            A+ + D +
Sbjct: 639 AQTFQIHDEKLTIVVNHLKSKGSGCLEDWLEFSESKDPADLQGKCNEFRVSAAKAIGDSL 698

Query: 196 TQKKES------------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------ 231
              +                P  +  D++   +        W T++              
Sbjct: 699 KDVEGDLLVIGDLNAYGMEDPVRVLTDYDAATSTRDVVTASWTTLNGETYEQEGSVIEKG 758

Query: 232 -DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              +    +   +   +         +D+ + + +A   L+      I   E  +     
Sbjct: 759 YGLINLNTQAHGAETYSYSYGGELGNLDHALGNASAAARLVDIQDWHINSVESGLFEYSG 818

Query: 291 RL-------------SDHCPISIDYDF 304
           +              SDH P+ +  ++
Sbjct: 819 KYTGDLVKSENVYSSSDHDPVIVALNY 845


>gi|126341987|ref|XP_001374214.1| PREDICTED: similar to DNL1L gene product [Monodelphis domestica]
          Length = 644

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 83/289 (28%), Gaps = 41/289 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77
            +R+ ++NI +  E         +  +      +L +       DI  +QE+        
Sbjct: 374 TLRICAFNIQSFGE---------AKAKRPEIMRVLVKVISRC--DICLVQEVRDSKGTAM 422

Query: 78  ----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                 + +  P + + +  S    +   K  +          R   V ++   Y +  A
Sbjct: 423 SLLLQELNRADPGHLYEVLESRRLGLGSYKEQNV------FVYRADVVSIMDS-YQVPEA 475

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           + S   A  R                L +     C  ++           L +  Q LK 
Sbjct: 476 EPSQEEAFLRGPFVARFCWPDSGSCNLVLLSHHACPRNAP-----RELDQLYRVVQDLKR 530

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                       ++ GDFN    ++         +  +        ++     + +    
Sbjct: 531 LWDV-----QDVMLLGDFNAGCTFVPPEAWPGIRLWHHPDFHWLIGDQVDTTVSRRTHCA 585

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISI 300
              I   V  +   + ++  S     + ++         ++SDH P+ +
Sbjct: 586 YDRI--IVHGKALLQAVVPGSAKTFNFQKELGMSEEEALQVSDHYPVEV 632



 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 81/299 (27%), Gaps = 35/299 (11%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           L F L+    + A   R+ ++N   L+                     L +       DI
Sbjct: 49  LFFVLLLADGTSA--FRICAFNAQRLTVT---------KVAKVRIMDSLVRILARC--DI 95

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             LQE+   +  A          F   +    +S   S     +    +   V    ++ 
Sbjct: 96  TVLQEVVDTSGDAIPLLLRDLNRF---DDSGPYSFLSSPLLGRSTYMEKYVYVYRSHKTQ 152

Query: 129 PLLGA-KDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            L     D  S    R        +  K   K+ ++ +H         L+  Y    ++ 
Sbjct: 153 VLGSYVYDDKSDIFAREPFVAQFSLPSKVLPKLALVPLHTTPKDVATELDALYRVFLNVS 212

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                                ++ GDFN   + L         +      +   ++ +  
Sbjct: 213 QHW-------------QSEDVMLLGDFNADCSSLSKKRQGELVLRTKPGFLWVIQDGEDT 259

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +        I   +  +     +   +      +    ++    +SDH P+ ++ +
Sbjct: 260 TVRDSTHCTYDRI--VIHGERCQGLVKWAAAFNFPRSFQLTETEALNISDHYPVEVELN 316


>gi|327287972|ref|XP_003228702.1| PREDICTED: LOW QUALITY PROTEIN: deoxyribonuclease-1-like [Anolis
           carolinensis]
          Length = 307

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 95/304 (31%), Gaps = 37/304 (12%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +VL L  F+ P  A     +R+ ++NI T           +S     +   L+ Q     
Sbjct: 5   WVLGLAAFVRPSLA-----LRVSAFNIQTFG---------DSKLSNDTITDLIVQIVSGY 50

Query: 65  DADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
             DI  +QE+   +  AV K+  +      +    +++     S+         R+    
Sbjct: 51  --DITLVQEVRDADLSAVKKLMHRLNQASAHPFSYVVSKPLGRSSYKEQYLFIYRQDQAS 108

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSC 181
           +L   Y   G +   +   +R    +       ++  ++ + L +     +  +      
Sbjct: 109 LLDSYYFDDGCEPCGNDTFSREPFVVRFAAPQTELGELVLVPLHA-----APNDAVLEID 163

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           +L          W           ++ GDFN   +++   D     +  + +      + 
Sbjct: 164 ALYDVYLDVKHRW------GTQDVLLLGDFNAGCSFVRAQDWAHIRLRTDPAFQWLIPDT 217

Query: 242 DSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPI 298
                   +       D  V +  +    L+  S     + E    S    L  SDH P+
Sbjct: 218 ADTTAGRSDCAY----DRIVAVGAHLQGGLLPGSAQVNNFQETFRLSYKDALAVSDHYPV 273

Query: 299 SIDY 302
            +  
Sbjct: 274 EVTL 277


>gi|254430067|ref|ZP_05043774.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881]
 gi|196196236|gb|EDX91195.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881]
          Length = 300

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 82/292 (28%), Gaps = 60/292 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQE 73
              V+L+S+NI      +    +            R+      + +   +   D+V LQE
Sbjct: 40  PDTVKLMSFNIQAGIGSQKFGDYITGSWKHLVAHPRSVETIEQIAEVLSHF--DVVGLQE 97

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPL 130
           +   +  ++   +       +     +     +   +         R +   +     P 
Sbjct: 98  VDGGSLRSRNMNQLVHLASMADFPFWHQQLNRNLGRLGQFSNGFLSRHQPFEITDHRLPG 157

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L           R A+ +      + + V+  HL                  + + Q  +
Sbjct: 158 LPG---------RGAIVIKYGHPIQPLVVVVAHLALG-------------EKVRNTQLSY 195

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L   +   K      V+ GDFN ++ +L          +   + +     +    N   +
Sbjct: 196 LARLLADYK----YVVMMGDFNCRLTHLD---------NSPLAALGLQTVQADNLNTYPS 242

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ ++  +                          LSDH P++ + 
Sbjct: 243 WAPDRHIDHILLSPDLESR-------------HTRVLTDCLLSDHLPLATEI 281


>gi|126444014|ref|YP_001062967.1| metal-dependent hydrolase [Burkholderia pseudomallei 668]
 gi|126223505|gb|ABN87010.1| metal-dependent hydrolase [Burkholderia pseudomallei 668]
          Length = 338

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               +++R+ ++NI+                 T S    +      L AD++ LQE+   
Sbjct: 47  QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPLG 95

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A           +   T                   AV  +      +   L     SF
Sbjct: 96  GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A++  +E     + V+  HL               S +  S Q   L   +  
Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                +P ++ GD N         + F +       +  F +    R            +
Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +     ++L+  +                   DH P+    
Sbjct: 241 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275


>gi|269958811|ref|YP_003328599.1| exodeoxyribonuclease 3 [Anaplasma centrale str. Israel]
 gi|269848641|gb|ACZ49285.1| exodeoxyribonuclease 3 [Anaplasma centrale str. Israel]
          Length = 295

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 84/312 (26%), Gaps = 74/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WN+N                        LR        DI  LQE    +     
Sbjct: 10  IRILTWNVN----------------SIRKRVDHLRSVLSEHRIDIALLQETKCTDD---- 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +            +A+  K   + +    +  + +  S A + 
Sbjct: 50  ------QFPLAELESLGYKCYIHGQKSRNGVAILSKYPIIGEVCNTIFDSAEGISAAQDT 103

Query: 144 RAVELL--------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            +  +         V+    KI V  +++ +   +D+    Y  +        + LK  +
Sbjct: 104 GSYSVTEARYLECLVDCREVKIRVASVYVPNGQEVDTETFVYKLNF------LRSLKARM 157

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN----------------DSLIRFPK 239
            +  E     V+ GD+N     +   D   + +D                         +
Sbjct: 158 LKLLEGEEWIVVGGDYNVAPECMDVYDA--QALDGKLCFHPEERARLRAILYSGFTDAFR 215

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                         +           ID+ ++  NA   L++        +        +
Sbjct: 216 VLHGGKQEFSWWNYREGSWQRNRGMRIDHILLSPNAVDRLVKC-------DILSSIRGLE 268

Query: 291 RLSDHCPISIDY 302
             SDH P+    
Sbjct: 269 SPSDHAPVVCIL 280


>gi|225864161|ref|YP_002749539.1| putative secreted protein [Bacillus cereus 03BB102]
 gi|225789553|gb|ACO29770.1| putative secreted protein [Bacillus cereus 03BB102]
          Length = 264

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 88/292 (30%), Gaps = 42/292 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +R+ ++NI                         + +  +++   I+ LQE+ S   +
Sbjct: 5   SDILRIATFNIWN------------HESLWFERLEAICEEIRSISPHILALQEVRSSVNL 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +              ++  +     +A   K   + +++      ++S    
Sbjct: 53  NSKKNVAQY--IAGQIGYPFCIFKEYPDSPDEGLAFLSKIPIIAEEAIWETDIEESNYC- 109

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               A+ +     G K  V ++HL               S  +  +Q   + +WI  +  
Sbjct: 110 ----AIRITFTYKGCKFGVTNVHLNW------------KSSRIRQEQMNTVNNWIENRAS 153

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--KDSRCNANKNLRNKI--- 255
                ++ GDFN     + +     K            +        +  KN   K    
Sbjct: 154 DYE--LLCGDFNDDPFSMVHQYLIRKHWIDVAQFKEIEENMIAQPTLDYRKNPNLKDDVK 211

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                D+ ++ Q    F      +  ++ E  + S G   SDH  + +D  F
Sbjct: 212 QEKRYDWIMI-QENTAFEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLKF 262


>gi|153834957|ref|ZP_01987624.1| nuclease [Vibrio harveyi HY01]
 gi|148868587|gb|EDL67675.1| nuclease [Vibrio harveyi HY01]
          Length = 982

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 94/382 (24%), Gaps = 96/382 (25%)

Query: 16  CTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66
             A     +R+ S+N+        +          R  ++          +      +DA
Sbjct: 467 APAIADSDLRIASFNVLNYFNSVADSGHENPTGQNRGATNLDEFLIQQAKIVAAMNKMDA 526

Query: 67  DIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHT 112
           DI+ L E+ +      +AV  +           ++ +      ++     +   ++ I  
Sbjct: 527 DIIGLMEVENNGFGDSSAVKNLVDALNAEIEDTEDHYTYVEIADQDKYQDEYFGSDAIMV 586

Query: 113 AIAVRKK--------NVRVLQQSYPLLGAKDSFSRAGNRRAVE----------LLVEING 154
           AI  R           V V  + +           A    A +            V+  G
Sbjct: 587 AILYRANEVTPKEAAKVIVTPEQHIEENTITRGDDAEGNPAYDKYQRHSLLQTFTVKETG 646

Query: 155 KKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           K + V+  H KS                   +      +     A  + D +   +    
Sbjct: 647 KDLSVVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAANVVGDALKGIEGD-- 704

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235
             ++ GD N                           + TI                    
Sbjct: 705 -VLVMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTTIGGGELQVEKTKIEKGYGYHN 763

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                  +   +         +D+ +   +  + ++      I   E ++     +    
Sbjct: 764 LNTVLHGADTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 823

Query: 292 ---------LSDHCPISIDYDF 304
                     SDH P+ I  DF
Sbjct: 824 MPKYKDAFSASDHDPVIIAIDF 845


>gi|229020312|ref|ZP_04177079.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
 gi|229026537|ref|ZP_04182888.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
 gi|228734763|gb|EEL85406.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
 gi|228740984|gb|EEL91215.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
          Length = 353

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 106/322 (32%), Gaps = 64/322 (19%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + ++ ++NI               G     +S ++T  +   +  + +N ++D   LQ
Sbjct: 53  GNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKKMLSFLQNENSDFTLLQ 112

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKK 119
           E+   +   + F  N              S   + +                  ++   K
Sbjct: 113 EVDIKS--HRSFDVNEHEFLKKGLPNYASSFGKNYDTRWVPVPVTKPMGYAEGGLSTFSK 170

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176
                   + L G +    R  +  R  VE  + + NGK + +++IHL +          
Sbjct: 171 YTVQTATRFQLPGMEPWPKRLFDLDRAIVEHKIPVDNGKYVRLVNIHLSA---------- 220

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQA++LK+++ +  ++    ++ GD+N+ ++    +D  +    P   +  
Sbjct: 221 YDEGGKIRKQQAEYLKEYMNKCYQNGDYVILGGDWNQLLSNAQLSDPKFVKERPEWLVEL 280

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 281 PKDFADGGFQWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 338

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 339 EN----------SDHNPVSAVF 350


>gi|163757409|ref|ZP_02164498.1| putative exodeoxyribonuclease iii protein [Hoeflea phototrophica
           DFL-43]
 gi|162284911|gb|EDQ35193.1| putative exodeoxyribonuclease iii protein [Hoeflea phototrophica
           DFL-43]
          Length = 270

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 82/308 (26%), Gaps = 67/308 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       L++   + +  D++ LQE    N     
Sbjct: 3   FSVTTWNIN----------------SVRLRLPLVQHLLETVQPDVLCLQETKCPN---DA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +       ++            +  +A+  +      Q     G  D+      R
Sbjct: 44  FPSAAFR------KIGYEHMAIHGQKGYHGVAILSRLPLSDDQRLSYCGIADA------R 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-ESL 202
               ++     ++I + + ++ +    D      +P         + ++    + + +  
Sbjct: 92  HVSAVVEAPGERRIRLHNFYVPAG--GDEPNRDINPKFGHKLDFIEEMRGLHAESELKDG 149

Query: 203 VPFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCN 246
           +  ++ GD N       + ++    K +                   +            
Sbjct: 150 ISSILVGDLNIAPLETDVWSHKQLLKVVSHTPVETENLTGMQQGGAWVDLIRTHIPPEEK 209

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+     +    L +                 +R SDH 
Sbjct: 210 VFTWWSYRAKDWAAADRGRRLDHVWSSADLADGLSK-------IEVLREARGWERPSDHV 262

Query: 297 PISIDYDF 304
           P++  +DF
Sbjct: 263 PVTAHFDF 270


>gi|222475141|ref|YP_002563557.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Florida]
 gi|222419278|gb|ACM49301.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Florida]
          Length = 315

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 84/326 (25%), Gaps = 76/326 (23%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
              +  +    + +R+++WN+N                        L         DI  
Sbjct: 28  LIPLMISGVSGRMIRILTWNVN----------------SVRKRVAHLCSVLTEHHVDIAL 71

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------- 123
           LQE    +               +    + +            +A+  K   V       
Sbjct: 72  LQETKCTDD----------QFPLAELEDLGYKCYIHGQKSRNGVAILSKYPIVGELCNTV 121

Query: 124 --LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
              ++    +    S+S    R  +E LV+    K+ V  +++ +   +D+    Y  + 
Sbjct: 122 FDAEEEIGTVQDTGSYSVTEARY-LECLVDYQDVKVRVASVYVPNGQEVDTETFVYKLNF 180

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP----------- 230
               +                   VI GD+N   + +   D   + +D            
Sbjct: 181 LRCLKARLLKLLAREDW------LVIGGDYNVAPDDIDVYDA--QALDGKLCFHPKERAG 232

Query: 231 -----NDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFS 276
                +       +              +           ID+ ++  NA   L++ S  
Sbjct: 233 LREILHLGFTDAFRILHEGKQEFSWWNYREGSWQRNRGMRIDHLLLSPNAVDKLVECSI- 291

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
                        +  SDH P+    
Sbjct: 292 ------LSSVRGLESPSDHAPVMCVL 311


>gi|196005147|ref|XP_002112440.1| hypothetical protein TRIADDRAFT_25141 [Trichoplax adhaerens]
 gi|190584481|gb|EDV24550.1| hypothetical protein TRIADDRAFT_25141 [Trichoplax adhaerens]
          Length = 267

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 77/275 (28%), Gaps = 16/275 (5%)

Query: 37  QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-AKVFPKNTWCIFYST 95
            E       +    +S    L Q      ADI+ L+E+  Y+     +     +  F+  
Sbjct: 1   NENFIKCPQTALAWSSRKHSLMQEILRSKADIICLEEVDHYSDFFQPILTSLDYIGFFVP 60

Query: 96  ERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           +          ++  D        KK   +L   + L       ++      +E      
Sbjct: 61  KPDSPCLLYDENNGPDGCALFFSAKKFSLILHDQFILRKNDGDTNQVAIVILLETTFLPE 120

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
            KKI ++  HLKS             S       A  L           +P +I GDFN 
Sbjct: 121 SKKICIVCTHLKSHSSEWCENIRKEQS-------AFLLNKVGQLINFEYIPIIICGDFNT 173

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKF 269
             N     +  +    P      +    +         R K      IDY        K 
Sbjct: 174 DPNTPTYTN--FANFQPCHLKSAYALNGEEPKFTTWKFRPKCQVCHTIDYIWFSDKFLKR 231

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +   +   +     +        SDH  +  ++ +
Sbjct: 232 VQFLAIPTMSEIGPNALPAEHYPSDHMSLVAEFKY 266


>gi|184201443|ref|YP_001855650.1| putative exodeoxyribonuclease III [Kocuria rhizophila DC2201]
 gi|183581673|dbj|BAG30144.1| putative exodeoxyribonuclease [Kocuria rhizophila DC2201]
          Length = 279

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 80/311 (25%), Gaps = 62/311 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A   Q VR+ + N+N +                 +    +  +      D++ LQE+ + 
Sbjct: 2   AQSGQSVRIATVNVNGIRA---------------AYRRGMADWLAPRGVDLLCLQEVRAP 46

Query: 78  NAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           + + + +  ++ W + ++       +            A     +    +    +G  + 
Sbjct: 47  DKITRELLDEDVWDVQHTEAAAKGRAGVAIATRRD---AFDSALLPTAAR----VGIGEE 99

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +     R     +   NG+ + ++  ++ S       +         +  +   L     
Sbjct: 100 YFDDSGRWIENDVTLPNGETLTLVSAYVHSGEVDTPKQTDKYRFMDAMLTRLPQLAQ--- 156

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKE 240
                    ++ GD N         +                 F +       +      
Sbjct: 157 ----GSDHALVVGDLNVGHTERDIKNWKGNVKNAGFLPEERAYFDRFFGDVGYVDVARSL 212

Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                        +           IDY +            +        D   S   R
Sbjct: 213 AGDVPGPYTWWSYRGKAFDTDAGWRIDYHMATPGLAARARSATV-------DRAASYHVR 265

Query: 292 LSDHCPISIDY 302
            SDH P+ +DY
Sbjct: 266 FSDHAPLVVDY 276


>gi|301165660|emb|CBW25231.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteriovorax marinus SJ]
          Length = 256

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 78/284 (27%), Gaps = 32/284 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S NI   +  +  + W            LL +   N   D++  QE      +  +
Sbjct: 2   LKVASTNIRFDNPADAPNDWAGRKS-------LLSELINNFAPDLLGTQEGREPQ-LKDL 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R     +      ++      K++  +     P      SF  A  R
Sbjct: 54  DQLLPAHTLIDGHRSWITERMYPCIFVNPLTVEVKESGDIWLSETPYEAGTKSFDSAFPR 113

Query: 144 RAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +  + +   K+   ++ HL                      Q Q L   I +    
Sbjct: 114 LCTWIHGVFKDTKKEFIYVNTHLDHVKSH------------TRRSQIQVLISEIKKINTK 161

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-LRNKIPIDYF 260
            +P ++ GDFN             +  +  D+     KE+++  +           ID+ 
Sbjct: 162 SLPIILTGDFNESPAEDVREVINREWTNLYDAWQFLGKEEETSFHKFDGVHDEGSRIDWI 221

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +             F                 SDH P+   + +
Sbjct: 222 L---------TDRFFKTKSIEIIKEHREEIYPSDHFPVFASFTY 256


>gi|323342310|ref|ZP_08082542.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463422|gb|EFY08616.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 252

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                  D+  +    + +D D++ LQE          
Sbjct: 2   MKLISWNVNGLRAV------------MKKDFEGI---FEAMDTDVLCLQETKMQAGQLDY 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  AV  +   +        G ++       R
Sbjct: 47  DPEGYYAYY-----------NYAEKKGYSGTAVYTRIKPLNVT----YGIQEDEHNTEGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       +++ ++  +        +          +  + L        +   
Sbjct: 92  -----VITCEYDDFFLVCVYTPNSQPELKRIDYRMQWEDDFREYLKML--------DETK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                   +     + +  +     +  F +   +  +  
Sbjct: 139 PVVLCGDLNVAHKEIDLKNPSANRKNPGFSDQEREQFTNLLDAGFIDSFRELHPNAIDRY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     +      + +             SDHCP+ 
Sbjct: 199 SWWSYRANARSRNTGWRIDYFVVSERLRNAIEAADILDQVL-----------GSDHCPVM 247

Query: 300 IDYDF 304
           I  +F
Sbjct: 248 IKLNF 252


>gi|257082798|ref|ZP_05577159.1| predicted protein [Enterococcus faecalis E1Sol]
 gi|256990828|gb|EEU78130.1| predicted protein [Enterococcus faecalis E1Sol]
          Length = 278

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 85/287 (29%), Gaps = 46/287 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+++ ++N+        V    +   + +     + Q     D  +  +QE+        
Sbjct: 24  KMKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDL 76

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---- 138
                     Y+T   ++  +         AI   ++ V+ +   Y  L           
Sbjct: 77  KA--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHP 128

Query: 139 -RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                R A+  L +         V+++HL           +     + ++   + L D I
Sbjct: 129 EAGCPRIALWGLFKETTQNTPFLVINVHL--------DHISDHARLAGMTVILEELHDKI 180

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNK 254
            Q      P ++ GDFN +     +     K  D  +    + P+         K     
Sbjct: 181 AQY-----PTLLMGDFNAESGEAVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 235

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 236 EEIDYIYV----------KGWQVQKTASLTDSIDGRFPSDHFPLEAE 272


>gi|229147624|ref|ZP_04275968.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
 gi|296505509|ref|YP_003667209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis BMB171]
 gi|228635833|gb|EEK92319.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
 gi|296326561|gb|ADH09489.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis BMB171]
          Length = 352

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 107/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +     ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNDFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N GK + ++++HL +        
Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  E+    ++ GD+N+ ++    +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|227538193|ref|ZP_03968242.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227241962|gb|EEI91977.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 269

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 93/325 (28%), Gaps = 77/325 (23%)

Query: 1   MIR-KYVLALVFFLVPCTASVAQK------------VRLVSWNINTLSEQEGVSLWKNSV 47
           M + K ++   F  +   A  + K            + ++++NI+  + +    +     
Sbjct: 1   MNKLKILMLTCFVSIASLACSSDKKEIPEPKTEKSKLTVITYNIHHGAPENSEVV----- 55

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLIN 100
                +   +    K  + D+V LQE+          +   K+        ++S      
Sbjct: 56  -----NLENIANTIKQKNPDLVALQEVDVNVPRSGKVDQAKKLAELLNMNYYFSKSLD-- 108

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWV 159
                  N     +A+  K      +   L            R      +++ NGK +  
Sbjct: 109 ------YNGGEYGVAILSKFPISNTRRLELPMP----VAGEKRTVALATIDLGNGKMLEF 158

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL                    + QA +L +      +   P +I GD+N + N + 
Sbjct: 159 ASTHLDLNVPN-------------RTAQATFLNEL---SVQLNKPIMIGGDYNAESNSVE 202

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                    +                   +N      ID+   ++ A +     S   + 
Sbjct: 203 -------LTELRKQYTLSCVNGCPNSFPVRNPTK--AIDFVASNKLAVQQYSLLSAVALT 253

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
                    G   SDH P+   Y++
Sbjct: 254 ---------GSYASDHLPVVAIYNY 269


>gi|110835509|ref|YP_694368.1| hypothetical protein ABO_2648 [Alcanivorax borkumensis SK2]
 gi|110648620|emb|CAL18096.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 300

 Score = 85.4 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 81/291 (27%), Gaps = 60/291 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEM 74
             V+L+S+NI      +    +            R+      + Q   +   D+V LQE+
Sbjct: 41  DTVKLMSFNIQAGIGSQKFGDYITGSWKHLVAHPRSVETIEQIAQVLSHF--DVVGLQEV 98

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
              +  ++   +       +   + +                   R +   +     P L
Sbjct: 99  DGGSLRSRNMNQLVHLASMAGFPVWHQQLNRNLGRFGQFSNGFLSRHQPFEITDHRLPGL 158

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                      R A+ +      + + V+  HL                  + + Q  +L
Sbjct: 159 PG---------RGAIVIKYGHPIQPLVVVVAHLALG-------------EKVRNTQLSYL 196

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              +   K      V+ GDFN ++N+L ++      +            +    N   + 
Sbjct: 197 ARLLADYK----YVVVMGDFNCRLNHLDHSPLAALGLQ---------TVRADNLNTYPSW 243

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID+ ++                             LSDH P++ + 
Sbjct: 244 APDRHIDHILLSPELESR-------------HTRVLSDCLLSDHLPLATEI 281


>gi|319652957|ref|ZP_08007062.1| exodeoxyribonuclease III [Bacillus sp. 2_A_57_CT2]
 gi|317395306|gb|EFV76039.1| exodeoxyribonuclease III [Bacillus sp. 2_A_57_CT2]
          Length = 251

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 85/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N +                         Y K +DADI  +QE        ++
Sbjct: 1   MKLVSWNVNGIRACVKKGFM---------------DYFKEVDADIFCIQESKLQEGQIEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +  +     G  D+ +    R
Sbjct: 46  I-LEGYHQYWN----------YAIKKGYSGTAVFTKKEPLSVR----YGLGDNETEPEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++++++  +     +           + +    L            
Sbjct: 91  I-----LTLEYEGFYLVNVYTPNSQRDLARLPYRLEWEERIREYLLGLDQI--------K 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                              +  +  +  F  +      A 
Sbjct: 138 PVIMCGDLNVAHFEIDLKNAKSNRGNSGFTDEERGKMTRLLGSGFVDAFRYKYPEAEGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +   + ++                     SDHCP++
Sbjct: 198 TWWSYMAKVRERNIGWRIDYFIVSEKLKERILDSQIH-----------CDIMGSDHCPVA 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELE 250


>gi|229199222|ref|ZP_04325900.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
 gi|228584239|gb|EEK42379.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
          Length = 352

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 107/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKEQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N GK + ++++HL +        
Sbjct: 168 SKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  E     ++ GD+N+ ++ +  +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|304320984|ref|YP_003854627.1| Exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503]
 gi|303299886|gb|ADM09485.1| Exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503]
          Length = 273

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/274 (10%), Positives = 71/274 (25%), Gaps = 44/274 (16%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +    + ++  +   D+  LQE+                   +      +         
Sbjct: 12  KARLPRILEWFDDRQPDVTVLQEIKCVTDA----------FPAAPFEDRGYHVEVFGQKT 61

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           +  +A+  K           L     F     R    L+    G  + V  ++L +    
Sbjct: 62  YNGVALLSKTPPEDV-----LRGVPGFDDDNARYIEALIPHDQGAPVRVGGLYLPNGNPA 116

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------- 221
              +  Y  +           +D             + GD+N   +  G           
Sbjct: 117 PGPKYDYKLA------WMAAFEDHARDLLAQEEAVCLLGDYNVIPDPSGVYAPDRWTEDA 170

Query: 222 ------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMDQNAYK 268
                    ++ +     +    + KD+      + +           ID+ ++   A  
Sbjct: 171 LFRLETRKAFRRLLNLGYVDALAQVKDAPFYTFWDYQRGAWDKDHGLRIDHCLLSPQAAD 230

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            L      +    +  + ++  + SDH P+ I  
Sbjct: 231 RLTGGDV-DRQVRDPALGNQDAKPSDHVPVWISI 263


>gi|126438983|ref|YP_001059231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 668]
 gi|126218476|gb|ABN81982.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 668]
          Length = 286

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 52/308 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+SWN+    +  G           T D       A+ L D D++  QE+        
Sbjct: 1   MRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              S +  A++         +    +                A+  +        + L  
Sbjct: 50  GGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              + + +  R A+E+ +      + V+  HL+ +            +   L ++A    
Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------ 237
                 +    PF         ++ GDFN                D    +  +      
Sbjct: 168 RASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLSRHPG 227

Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             P       +  +     +  D+  +     + L +                  R SDH
Sbjct: 228 KTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASDH 276

Query: 296 CPISIDYD 303
            PI ++  
Sbjct: 277 QPIVLELS 284


>gi|53719141|ref|YP_108127.1| hypothetical protein BPSL1507 [Burkholderia pseudomallei K96243]
 gi|67639890|ref|ZP_00438719.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|124383859|ref|YP_001026065.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126449985|ref|YP_001080667.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei NCTC 10247]
 gi|126454152|ref|YP_001066498.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134277293|ref|ZP_01764008.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 305]
 gi|167002249|ref|ZP_02268039.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei PRL-20]
 gi|167845399|ref|ZP_02470907.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei B7210]
 gi|167902390|ref|ZP_02489595.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei NCTC 13177]
 gi|167910632|ref|ZP_02497723.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei 112]
 gi|217421528|ref|ZP_03453032.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 576]
 gi|226197165|ref|ZP_03792742.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|254178197|ref|ZP_04884852.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei ATCC 10399]
 gi|254197468|ref|ZP_04903890.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei S13]
 gi|254199957|ref|ZP_04906323.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei FMH]
 gi|254206290|ref|ZP_04912642.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei JHU]
 gi|254297422|ref|ZP_04964875.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei 406e]
 gi|254358295|ref|ZP_04974568.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei 2002721280]
 gi|52209555|emb|CAH35508.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|124291879|gb|ABN01148.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei NCTC 10229]
 gi|126227794|gb|ABN91334.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106a]
 gi|126242855|gb|ABO05948.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei NCTC 10247]
 gi|134250943|gb|EBA51022.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 305]
 gi|147749553|gb|EDK56627.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei FMH]
 gi|147753733|gb|EDK60798.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei JHU]
 gi|148027422|gb|EDK85443.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei 2002721280]
 gi|157807264|gb|EDO84434.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei 406e]
 gi|160699236|gb|EDP89206.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei ATCC 10399]
 gi|169654209|gb|EDS86902.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei S13]
 gi|217395270|gb|EEC35288.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 576]
 gi|225930544|gb|EEH26554.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|238520501|gb|EEP83960.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|243062066|gb|EES44252.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei PRL-20]
          Length = 286

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 52/308 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+SWN+    +  G           T D       A+ L D D++  QE+        
Sbjct: 1   MRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              S +  A++         +    +                A+  +        + L  
Sbjct: 50  GGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              + + +  R A+E+ +      + V+  HL+ +            +   L ++A    
Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------ 237
                 +    PF         ++ GDFN                D    +  +      
Sbjct: 168 RASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHPG 227

Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             P       +  +     +  D+  +     + L +                  R SDH
Sbjct: 228 KTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASDH 276

Query: 296 CPISIDYD 303
            PI ++  
Sbjct: 277 QPIVLELS 284


>gi|293557096|ref|ZP_06675652.1| exodeoxyribonuclease III [Enterococcus faecium E1039]
 gi|293567361|ref|ZP_06678711.1| exodeoxyribonuclease III [Enterococcus faecium E1071]
 gi|291589963|gb|EFF21761.1| exodeoxyribonuclease III [Enterococcus faecium E1071]
 gi|291600740|gb|EFF31036.1| exodeoxyribonuclease III [Enterococcus faecium E1039]
          Length = 250

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +    LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D+  R    
Sbjct: 45  LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +++  +  +        +             + L        +   
Sbjct: 92  ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +          +  N  +  F     ++    
Sbjct: 138 PVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  ++    L                      SDHCP+ 
Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHT-----------DIMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|88657831|ref|YP_507482.1| exodeoxyribonuclease III [Ehrlichia chaffeensis str. Arkansas]
 gi|88599288|gb|ABD44757.1| exodeoxyribonuclease III [Ehrlichia chaffeensis str. Arkansas]
          Length = 281

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 86/318 (27%), Gaps = 78/318 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ +WN+N                        L  +  N   DI  LQE+   +    
Sbjct: 2   TLKIATWNVN----------------SIRKRLDHLCNWLINSAIDIALLQEIKCTDE--- 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-------------LQQSYP 129
                     +     + +            +A+  +   V              +  Y 
Sbjct: 43  -------QFPFFDVESLGYKCYVHGQKARNGVAIITRYPIVGELVTSIFSSDYKSKLCYE 95

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L      ++   +R  +E +V  +  KI +  I++ +   +DS       +         
Sbjct: 96  LSSENFIYNCDESRY-LECVVLHHNIKIRIASIYVPNGQSIDS------DAFQYKLGFFD 148

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSL 234
            L++      +     ++ GD+N     +   D                 +++I  N   
Sbjct: 149 QLREHALSLLKKEEILILGGDYNVAPYPIDVYDPEVMDGKLCFHKSEREKFRSI-LNLGF 207

Query: 235 IRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
               +  +           K           ID  ++   A   L+     + L   D  
Sbjct: 208 TDSFRVLNDYEKKFSWWNYKAGAWQQNRGLRIDNLLLSPQATDKLLSCVIHDKLRGLDT- 266

Query: 286 KSRGKRLSDHCPISIDYD 303
                  SDH P+  + D
Sbjct: 267 ------PSDHAPVVCELD 278


>gi|37676369|ref|NP_936765.1| hypothetical protein VVA0709 [Vibrio vulnificus YJ016]
 gi|37200911|dbj|BAC96735.1| hypothetical protein [Vibrio vulnificus YJ016]
          Length = 322

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/318 (16%), Positives = 100/318 (31%), Gaps = 39/318 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + + S N+       G     +   +        T L Q  + +DAD+V  QE+ S +A+
Sbjct: 2   ITIASCNLFNFLAPPGAYYEFSNILTDNEWNKKTTWLTQQLRAMDADVVAFQEVFSPDAL 61

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-------GA 133
             +     +  ++      + +     +    AIA R   +                   
Sbjct: 62  NTLTSDLGYP-YFVCLDKPHVTDEFIYSKPVLAIASRWPVIESRLVRLKDCFGDYSENSD 120

Query: 134 KDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSL--------- 183
             + ++  +R  +  ++E+    +  V+ +HLKS             + +          
Sbjct: 121 SVTDNKEFSRLPLHAVIELPIIGLCDVITLHLKSQRPTRWQTQQIDQADNTPPSDPVGSW 180

Query: 184 -----LSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-----ND 232
                   +A  L  +I +       P VI GDFN  IN         ++  P      D
Sbjct: 181 LSTVQRGWEAVLLSQYIKKIYASHARPMVIMGDFNANINSTELKPLIDESNTPLLKDVRD 240

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDD------I 285
            L   P   D    A     ++  I DY ++ +   +   Q+          D       
Sbjct: 241 WLREQPIFTDEAQKATHYHGSQGLILDYLLLSEEFAQQNAQQRGKITHLVVWDKHLVNPS 300

Query: 286 KSRGKRLSDHCPISIDYD 303
               +  SDH  +++  D
Sbjct: 301 FEVDQFASDHAFVAVTID 318


>gi|331682296|ref|ZP_08382915.1| putative cytoplasmic protein [Escherichia coli H299]
 gi|331079927|gb|EGI51106.1| putative cytoplasmic protein [Escherichia coli H299]
          Length = 253

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LQLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|75908773|ref|YP_323069.1| exodeoxyribonuclease III [Anabaena variabilis ATCC 29413]
 gi|75702498|gb|ABA22174.1| Exodeoxyribonuclease III [Anabaena variabilis ATCC 29413]
          Length = 260

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 83/305 (27%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  + K    D++ LQE    +     
Sbjct: 1   MKIATWNVN----------------SIRTRLEQVVDWLKQNPVDVLCLQETKVID----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAKDSFSRAG 141
                     S    + +    S    +  +A+  +       +   P+L   +      
Sbjct: 40  -----HDFPRSPFENLGYHSYISGQKAYNGVALISQQQLTDVTTGFTPILPDIEPIWDEQ 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R    ++       + ++++++ +   + S +  Y        +    LK+++      
Sbjct: 95  KRVITGVI-----DGVRIVNLYVPNGSAIASEKYEYK------LRWLTVLKEYLRSLLLL 143

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                I GDFN  +     +                   + +        F K      +
Sbjct: 144 QPSICICGDFNIALEDKDIHEKVKAENHIMASPAERQALRDVLELGFADAFRKFTTEGGH 203

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+  +    Y+              D    +  + SDH P
Sbjct: 204 -FSWWDYRAASFRRNQGWRIDHHYLTPVLYEQAKSCII-------DVSPRKLTQPSDHTP 255

Query: 298 ISIDY 302
           + ++ 
Sbjct: 256 VIVEI 260


>gi|71002678|ref|XP_756020.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus Af293]
 gi|66853658|gb|EAL93982.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus Af293]
 gi|159130073|gb|EDP55187.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus A1163]
          Length = 300

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 75/310 (24%), Gaps = 39/310 (12%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    +R+++ NI   +             R       L    +N DA  + LQE+   
Sbjct: 3   TTTELPLRILTHNIRY-ATSSPFKGELPWNDRKQPLLNELLFNTRNQDA-FICLQEVLHN 60

Query: 78  NAVAKVFPK--------------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
             V  +                   W          + +   S      ++        V
Sbjct: 61  QLVDVLSGLKQPPSTIPKSASETQQWEYIGVGRDDGHKAGEYSPIFYQPSVWQLCHWESV 120

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                P   +K  +  A  R     +   N  +  VL ++                    
Sbjct: 121 WLSETPNKPSK-GWDAASIRILTIGVFTHNITRHTVLVMNTHL----------DDQGSQS 169

Query: 184 LSQQAQWLKDWITQKKESL-----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF- 237
             + A+ +   I + +            +AGDFN +      N          D+     
Sbjct: 170 RFEAAKIILQKIDEYRSGKFGTLIAGVFLAGDFNSQETQEAYNVLTGSESSLVDTAKVVE 229

Query: 238 PKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           P +                    IDY ++     K               +    G  LS
Sbjct: 230 PSQHYGNYYTWTGFGYEGEDPTRIDYILIGPGKNKL--GSWIVNGYAVLANRFDSGVFLS 287

Query: 294 DHCPISIDYD 303
           DH  +  D  
Sbjct: 288 DHRAVVADIT 297


>gi|319407783|emb|CBI81434.1| exodeoxyribonuclease III [Bartonella sp. 1-1C]
          Length = 272

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 82/305 (26%), Gaps = 68/305 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WNIN                      + + QY      D++ LQE+        +FP
Sbjct: 5   IATWNIN----------------SIRLRLSQVLQYLDIFSVDMLCLQEIKCP---DDLFP 45

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +  +                S    +  +A+  +   +  +       +D          
Sbjct: 46  RQFFEAAGYQH------IALSGQKSYHGVAIISRLPFISVERRFFCQKEDCRH------- 92

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           + +++E++G+KI + + ++ +    D  +   +          + +   I       +  
Sbjct: 93  LSVVIELHGRKIRIHNFYVPAG--GDEPDVNKNEKFRHKLDFLEEMSS-IRADHRDGLES 149

Query: 206 VIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANK 249
           ++ GD N       + ++    K +                   +     +         
Sbjct: 150 LLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETERLQALCCEGGWVDLMRMKFPIPTKLYT 209

Query: 250 NLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               +            +D+     N   F                     + SDH P+ 
Sbjct: 210 WWSYRARDWALSDRGRRLDHIWSSPNLVPF-------VKELTIFRDTRGWPQPSDHVPVQ 262

Query: 300 IDYDF 304
             +DF
Sbjct: 263 TLFDF 267


>gi|313203809|ref|YP_004042466.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
 gi|312443125|gb|ADQ79481.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
          Length = 313

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 92/289 (31%), Gaps = 30/289 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + ++++SWNI  L      +   +          ++    +  D  I+  QE  S    
Sbjct: 34  TKPLKILSWNIYMLPYISLFNHNADRA-------RVIADKLEFSDYQIIVFQEAFSSKCR 86

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +  +          +    +K        + + V  K                 F   
Sbjct: 87  NILAKRLAKEY---PYQYGPANKCYWPFRTSSGLWVVSKMPLKQLAKIKFTEGS-GFDII 142

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW-ITQKK 199
             + AV    +  G +  +L  HL++             S  + ++Q + +K+  + +  
Sbjct: 143 ARKGAVLFQGDFEGTRFQLLATHLQAD-----------NSEKIRAKQCREIKEHLLNEFY 191

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF----PKEKDSRCNANKNLRNKI 255
              +P +I GDFN +++   N      T++ N+ LI        ++     A      K 
Sbjct: 192 NPNIPQLICGDFNIEMDDRVNYQRMLSTLEANNGLISGEVKCTYDEIDNNLARNAQGEKK 251

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            IDY ++        I+               +   LSDH  +  +  F
Sbjct: 252 VIDYILVRNEQLIHRIERKVHTFYARI---GEKSSNLSDHYAMEANIVF 297


>gi|163868656|ref|YP_001609865.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476]
 gi|161018312|emb|CAK01870.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476]
          Length = 260

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 90/302 (29%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNI                    + +  L Q+ +    DIV LQE+ S   + + 
Sbjct: 1   MKIATWNIAG----------------IKARHETLYQWLQKSQPDIVCLQEIKS---IDES 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP++           + +            +A+  K               D  +R    
Sbjct: 42  FPRD-------AIENLGYHIETHGQKSFNGVAILSKKTPDEVIRRLPGNDNDEQTRY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   N   + +  ++L +   ++S + +Y        +  + L            
Sbjct: 92  --IEAVYSTNKGVVRIASLYLPNGNPIESEKYSYK------MEWMERLYAHTKSLLAYEE 143

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N     L                     ++ I             D+   + 
Sbjct: 144 PLVLAGDYNVIPTPLDAKKPQEWNQDALFLQKTRKAFQRILHLGLYDAIRNVTDTPSFSF 203

Query: 249 KNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +         N I ID+ ++   A   L       I  +         + SDH P+ I 
Sbjct: 204 WDFQAGAWPKNNGIRIDHLLLSPEAVDRL-------ICAHSQTEVRGYPKPSDHVPVWIH 256

Query: 302 YD 303
            +
Sbjct: 257 LN 258


>gi|148284985|ref|YP_001249075.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
 gi|146740424|emb|CAM80902.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
          Length = 273

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 83/307 (27%), Gaps = 68/307 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++K+++++WNIN                   +    L Q   ++  DI+ LQE+   +  
Sbjct: 11  SRKLKILTWNIN----------------SIRARAYQLNQLIYDIQPDIILLQEIKCES-- 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                      F        ++   +    +  +A+  K      +   L       +R 
Sbjct: 53  -------HNFPFQEINESHKYNFSINGQKSYNGVAILSKFPLEDIKFTFLGNPCPDQARF 105

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +E         + V+ I++ +   ++S          +          ++   K 
Sbjct: 106 -----IEANCLTEVGYVKVISIYVPNGGEVNS------DKFQIKLLFIDKFIKYLHSSKN 154

Query: 201 SLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRC 245
                ++ GDFN                            + +  ++ +  +      + 
Sbjct: 155 LGESIILGGDFNVAPYDNDVYSAIELQNTTCFTLPEKQYIRKLINHNFIDIYRLFHQRQK 214

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +         + IDY +   +                 D       R SDH 
Sbjct: 215 K-FTWWDYRAGAFERNLGMRIDYILCTISIALKATDCYI-------DYHTRNNHRASDHA 266

Query: 297 PISIDYD 303
           P+   ++
Sbjct: 267 PVIASFE 273


>gi|146297800|ref|YP_001192391.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
           UW101]
 gi|146152218|gb|ABQ03072.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
           UW101]
          Length = 269

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 97/308 (31%), Gaps = 49/308 (15%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++      + FL+    + +Q  + +SWN+                 +  +  + + +  
Sbjct: 1   MKNSTFYFLLFLLTSFQAFSQT-KFISWNLENFG-----------KSKYQASLSFIAKTV 48

Query: 62  KNLDADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           +    DI+ +QE+    G   AVAK+              + + +  +S      A   +
Sbjct: 49  QEY--DIIAIQEVVAGYGGSQAVAKLASILNEKGSKWDYTISDPTSGNSYKKERYAFIWK 106

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
              V++  +       +  +    +R       E+N K +  ++ H  +       E  Y
Sbjct: 107 TSKVKLKGK----PWLEKKYHLEIDREPYFATFEVNKKLVTFVNFHAITKSKQPETEIKY 162

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---GNNDDFWKTIDPNDSL 234
                               ++   +  V  GDFN   ++          + ++      
Sbjct: 163 FKFLP---------------QEYPDLNLVFTGDFNCPESHTVFNPLKKMGYVSVFQKQKT 207

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
               K K   C A++        D      N  K +       + YN  D     +++SD
Sbjct: 208 TLKQKCKAEVCLASEF-------DNIFYKSNTLKPIKSG--VVLFYNNYDSLQEARKISD 258

Query: 295 HCPISIDY 302
           H PI  ++
Sbjct: 259 HIPIWFEF 266


>gi|21903354|gb|AAG28792.2| epithelial lens deoxyribonuclease I [Bos taurus]
          Length = 272

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 90/284 (31%), Gaps = 30/284 (10%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--K 82
           ++ ++NI T  E               +  + + +  +    DIV +QE+   + VA  K
Sbjct: 14  KIAAFNIRTFGET---------KMSNATLASYIVRIVRRY--DIVLIQEVRDSHLVAVGK 62

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +          +   +++     ++         R   V VL       G +   + + +
Sbjct: 63  LLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFS 122

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +    +  K+    I        D++    S     L  Q +W  +         
Sbjct: 123 REPAVVKXSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLN--------- 173

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              ++ GDFN   +Y+ ++      +  + +      +       + N       D  V+
Sbjct: 174 -DVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIVV 228

Query: 263 DQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303
             +  +  ++  S +   +      S      +SDH P+ +   
Sbjct: 229 AGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 272


>gi|330943652|gb|EGH45968.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 245

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 51/287 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80
            + +++ N++                        LR+  + + ADIVFLQE+     +  
Sbjct: 3   SLNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEVHGEQQSHA 52

Query: 81  AKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            KV    T   +     S      + +     D     A+  K   +  ++  +     S
Sbjct: 53  RKVKDWPTISQYEFLADSMWSDFAYGRNAVYPDGDHGNALLSKYPIIQHENLDI-----S 107

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +  ++E+      V  + +                 S   QQ + L + + 
Sbjct: 108 IHGTEQRGLLHCILEVPHAG-RVHAVCVHLGLR-----------ESHRRQQLKLLNELMA 155

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +      P ++AGDFN              ++  +     F +   +   +       + 
Sbjct: 156 R-IPEGEPVIVAGDFNDW------RRRADASLQGSGLHEVFVERFGAPAKSFPARWPLLC 208

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D   +           S                 LSDH P++++  
Sbjct: 209 LDRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 244


>gi|313159540|gb|EFR58903.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 274

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 90/303 (29%), Gaps = 45/303 (14%)

Query: 2   IRKYVL---ALVFFLVPCTASVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           I KY+L   AL+  ++P  ++ AQ V+L  + WNI +    +  +           +   
Sbjct: 3   INKYILGAGALLCMMLPAASAQAQDVKLKCMEWNIKSFEYDDNSNAVYF-------EIAE 55

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
             +  K  + DIV   E  +         K T     S           + ++      +
Sbjct: 56  AMEKIKAENPDIVCFNEFETATGRMSSVEKLT-ECAQSLGMFPFFVFSYNKDNGAYGNGI 114

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K   V   S  L     +  R+     + +  +   + + V  +      F       
Sbjct: 115 LSKYPIVNSASVLLGMYTGADQRSAGWADILVPTDSKPEGVKVRIVCTHLDAFGGD---- 170

Query: 177 YSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                     QA+ + +  I       +P +I GD N   +     +             
Sbjct: 171 -----ETCLGQAKEVIEHAIAPAVAENIPVLIMGDMNCGPSSSAIRE------------- 212

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            + K     CN +        +DY  +     K+   +              R   +SDH
Sbjct: 213 -YEKTGTRLCNNDGTFGGYSKLDY-FISFPQGKWSCSDYKVVK-------GDRLNVISDH 263

Query: 296 CPI 298
            PI
Sbjct: 264 YPI 266


>gi|114765837|ref|ZP_01444930.1| exodeoxyribonuclease III, putative [Pelagibaca bermudensis
           HTCC2601]
 gi|114541836|gb|EAU44873.1| exodeoxyribonuclease III, putative [Roseovarius sp. HTCC2601]
          Length = 262

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 71/307 (23%), Gaps = 73/307 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       L+ +       D++ LQE  S      
Sbjct: 2   PFTLATWNIN----------------SVRLREALVCKLLTEEAPDVLCLQECKS------ 39

Query: 83  VFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                   I     R + +          +  +A+  K        +   G   +     
Sbjct: 40  ----PVEKIPMEAFRALGYGHVVARGQKGYNGVAILSKLPMRDMGDHDFAGLGHARH--- 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               V   +E     + V + ++ +    D  +   +            ++DW   +   
Sbjct: 93  ----VAAELENG---VTVQNFYVPAG--GDVPDREVNEKFGQKLDYLAEMRDWFRAEAPK 143

Query: 202 LVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCN 246
               ++ GD N         ++    K +                   +   ++      
Sbjct: 144 KS--ILVGDLNIAPREDDVWSHKQLLKVVSHTPVEVEALAETQEAGGWVDITRKDIPEGQ 201

Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+     +                        ++ SDH 
Sbjct: 202 LYSWWSYRARDWDAADKGRRLDHVWATPDIASAGHSS-------RVLRDARGWEKPSDHA 254

Query: 297 PISIDYD 303
           P+   +D
Sbjct: 255 PVFATFD 261


>gi|15890010|ref|NP_355691.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58]
 gi|15157983|gb|AAK88476.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58]
          Length = 267

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/308 (10%), Positives = 76/308 (24%), Gaps = 68/308 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              + +WNIN                       ++ Q+      DI+ LQE    N    
Sbjct: 2   SFSITTWNIN----------------SVRLRMPIVEQFLVRYKPDILCLQETKCPNGEFP 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P       +                 +  +A+  K            G  D+      
Sbjct: 46  MKPLKALGYEHVIIH---------GQKGYHGVAIASKIPLTEDHRQDYCGIGDARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +  + ++  +++ + + ++ +    D  + + +P         + +K  +       
Sbjct: 93  ---ISAIFQVGSRRVRLHNFYVPAG--GDEPDRSINPKFGHKLDFIEEMKA-LRADGVPG 146

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GD N                   +     +     +   + L            
Sbjct: 147 TSSILVGDLNIAPLENDVWSHKQLLKIVSHTPVETEGMLDIMKKGNWLDLMRLNVPETEK 206

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+    Q+    L +                  R SDH 
Sbjct: 207 IYTWWSYRAKDWEAANRGRRLDHIWSSQDLGSSLEK-------IEILREARGWNRPSDHV 259

Query: 297 PISIDYDF 304
           P++  + F
Sbjct: 260 PVTAHFRF 267


>gi|254786174|ref|YP_003073603.1| exonuclease III [Teredinibacter turnerae T7901]
 gi|237686598|gb|ACR13862.1| exodeoxyribonuclease III [Teredinibacter turnerae T7901]
          Length = 273

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/315 (12%), Positives = 82/315 (26%), Gaps = 80/315 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +  VS+N+N                   +    L    +  + D + LQE  +   N   
Sbjct: 3   ITCVSFNVN----------------SIRTRLHQLEAVVEKYNPDFIGLQETKVADENFPR 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +  + +                   H  +A+  K+  +  Q       +D+  R  
Sbjct: 47  EDIERLGYHV------------EFLGQKTHYGVALMSKHPFLSVQKGFATDGEDAQKRF- 93

Query: 142 NRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               +    EI   K + V++       F     NT+             L+  +T +  
Sbjct: 94  ----IVGQFEIGADKPLTVMN-----GYFPQGESNTHPVKFPNKRNFYSDLQSLLTGQYS 144

Query: 201 SLVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPK 239
                ++ GD N                        ++L    ++   +          K
Sbjct: 145 PEDNLIVMGDMNISPQDIDIGIGEDNRKRWLRSGKCSFLPEEREWLDRLLCWGLHDTLRK 204

Query: 240 EKDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
            +    +       +             ID  +  Q   +              D     
Sbjct: 205 LQPEADDLYSWFDYRSRGYEREPRRGLRIDLILATQQLVEKCSNAGI-------DLEIRG 257

Query: 289 GKRLSDHCPISIDYD 303
            ++ SDHCPI  ++ 
Sbjct: 258 MEKPSDHCPIWAEFS 272


>gi|227874120|ref|ZP_03992326.1| exodeoxyribonuclease III [Oribacterium sinus F0268]
 gi|227840032|gb|EEJ50456.1| exodeoxyribonuclease III [Oribacterium sinus F0268]
          Length = 254

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 84/303 (27%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L    G +  ++                K LDAD+  LQE           
Sbjct: 5   KLISWNVNGLRAVMGKNFMED---------------FKRLDADMFCLQETKLQEG-QIDL 48

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++           +    ++  A+  K   +  Q    +   D   R     
Sbjct: 49  DLPGYFQYWN----------YAVKKGYSGTAIFTKEEPLSVQYGIGVEEHDQEGR----- 93

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +   + +++ +++ +                        L+           P
Sbjct: 94  ----VITLEYPEFYLITVYVPNSQGELKRLPYRMKFEDAFLNYILTLEK--------KKP 141

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +  GD N                           +  +  +  L  F     ++     
Sbjct: 142 VIYCGDLNVAHEEIDLKNPDSNHMNAGFSDEERAKFSRVLDSGYLDSFRHFYPNKEEEYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYFV+ +   K L+  S  + +             SDHCP+ I
Sbjct: 202 WWSYRTKARDRNVGWRIDYFVVSKQLEKKLLSASIHQEV-----------MGSDHCPVEI 250

Query: 301 DYD 303
             D
Sbjct: 251 TLD 253


>gi|254384157|ref|ZP_04999501.1| large secreted protein [Streptomyces sp. Mg1]
 gi|194343046|gb|EDX24012.1| large secreted protein [Streptomyces sp. Mg1]
          Length = 613

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/330 (12%), Positives = 86/330 (26%), Gaps = 67/330 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A  A ++ + ++N+  L   +    + N  K    +             D+V L+E+   
Sbjct: 304 AQAANELAVATYNVENLDPTDPQEKFDNLAKAVVENLA---------SPDVVALEEIQDD 354

Query: 78  NAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           N                            +    +     N    +   +I         
Sbjct: 355 NGAKNDGTVSAEQTLTKFTAAITAAGGPAYQW-RTVNPENNKDGGEPGGNIRQVFLFNPA 413

Query: 120 NVRVLQQS---------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
            V   +++                      P      + + A +R+ +       GK ++
Sbjct: 414 RVSFTERAPGDAATATGVVKEQGKAALTHSPGRIDPANPAWADSRKPLAGEFVFRGKTVF 473

Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFN 212
           V+  H  S    + L + + P    S +    QAQ +  ++ +    +     +  GD N
Sbjct: 474 VIANHFGSKGGDEGLTSVHQPPVRSSETKRLLQAQAVNGFVKELLAADKNANVIALGDIN 533

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                   N       D             +   +     N   +D  +       F   
Sbjct: 534 DFEFSATANALA----DGGALYPAIKSLPKAERYSYVYQGNAQVLDQILTSPAIKTFTYD 589

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  ++  +        SDH P  + +
Sbjct: 590 SVHINAEFSAQN--------SDHDPQVLRF 611


>gi|163756803|ref|ZP_02163912.1| endonuclease/exonuclease/phosphatase family protein [Kordia
           algicida OT-1]
 gi|161323192|gb|EDP94532.1| endonuclease/exonuclease/phosphatase family protein [Kordia
           algicida OT-1]
          Length = 344

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 90/325 (27%), Gaps = 72/325 (22%)

Query: 2   IRKYVLALVFFLV-------------PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48
            R+++L+    ++               TA     + ++S+N+   +         N +K
Sbjct: 69  RRQFLLSFFVLIIGYSHVTSLYKFSRNTTAPSQNSISVMSYNVRLFN-------IYNWIK 121

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
            T  D   +         D+V  QE          F   T+                   
Sbjct: 122 ETHVD-KKIVDLVHADFPDVVAFQEFHKNQ--QAAFNFYTYKHVVLK-----------GK 167

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
           +  T  A+  K   V + S       ++        A+ + +  N   I V ++HL+S  
Sbjct: 168 NKKTGQAIFSKYPIVHKGSLEFPNTPNN--------AIYIDIVKNKDTIRVYNLHLQSLR 219

Query: 169 FLDSLENTYSPS--------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
                E     +              Q    + +   +K      +I GDFN        
Sbjct: 220 INPQKEELTQENSERLLKRMAKTFKMQQSQAELFEINRKNCTYKKIILGDFNNSQFSNVY 279

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                           F +               + ID+ ++D++              +
Sbjct: 280 KTIKGSM------KDAFVEAGSGFGKTLDYPFFPMRIDFVLVDES--------------F 319

Query: 281 NEDDIKSRGKRLSDHCPI--SIDYD 303
             +  K+  +  SDH  I   I  D
Sbjct: 320 TVNKFKTFTEHYSDHYAIQSVISLD 344


>gi|325268539|ref|ZP_08135169.1| AP endonuclease domain protein [Prevotella multiformis DSM 16608]
 gi|324989067|gb|EGC21020.1| AP endonuclease domain protein [Prevotella multiformis DSM 16608]
          Length = 366

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 86/302 (28%), Gaps = 69/302 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAV 80
             ++++S+N+   S        +N           +  Y     ADIV LQE        
Sbjct: 99  GSIKVLSYNVFMFSTWSEPGGEQNP----------IVDYILKSKADIVCLQEAQADVEGT 148

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +++P       Y    +      D        + +  +   + Q S P     +     
Sbjct: 149 DRIYPALKKHYPYFRLMVKKKPGADH-------MVLLSRYPVLWQDSIPYGSGSNQS--- 198

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFC--------------FLDSLENTYSPSC----- 181
                V  LV+I G K  V++ H +S                      +  + S      
Sbjct: 199 -----VAYLVDIKGTKTLVVNNHFESNGLSTGDKENFKTLVKGDMDTHDARNESFHLLRK 253

Query: 182 -----SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                +  + QA  +  ++ +  +  VP ++ GDFN        +    + +        
Sbjct: 254 LGEVSARRAPQAVAVARYVRKYLDRKVPVILCGDFNDSP-LSYTHRTIARELTD-----C 307

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +    +    +         ID+     +         F       DD        SDH 
Sbjct: 308 YVASGNGPGISYHRSGMYFRIDHIFCSDD---------FEPYGAKVDDSAET----SDHY 354

Query: 297 PI 298
           P+
Sbjct: 355 PV 356


>gi|325109290|ref|YP_004270358.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
 gi|324969558|gb|ADY60336.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
          Length = 247

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 78/281 (27%), Gaps = 49/281 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+S+NI           +    +R   ++       ++ + DI+ LQE+       + 
Sbjct: 1   MRLLSYNIQ--------KGYGGRDRRY--NFERTIAAIEHENPDIIVLQEVDHNERRTRF 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      Y      ++      +       +  +          L            R
Sbjct: 51  DNQPEILSDYFRYEATDYQFNHRVSKGGYGNLLISRFPFHSVTQVCL-----KLKHRKKR 105

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  ++V+    K+ ++  HL                      Q   L D +  +    +
Sbjct: 106 GAQVVVVDSPEGKLLLVGWHLGLK-------------EKQRHAQVNHLLDHVDLQDNLDL 152

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPIDYFV 261
           P +I GDFN         D      D   +   F +                   +D   
Sbjct: 153 PTLIVGDFN---------DWRNTLADGPFAKHGFEQLTRPPSRYRTFPAYLPIGSLDKAF 203

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    ++   +++           K  SDH P+ +D+
Sbjct: 204 CRGPINVRDVRVVRNQLT----------KEASDHLPLLVDF 234


>gi|260769666|ref|ZP_05878599.1| hypothetical protein VFA_002724 [Vibrio furnissii CIP 102972]
 gi|260615004|gb|EEX40190.1| hypothetical protein VFA_002724 [Vibrio furnissii CIP 102972]
          Length = 322

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 91/315 (28%), Gaps = 37/315 (11%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +VR  + N+ N L+       + N     +       L Q    L+AD++  QE+ S +A
Sbjct: 2   QVRFATANLFNYLAPPNAFYEFNNIYEQTQWQQKQRWLSQKLTALNADVIGFQEVFSPHA 61

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +        +  ++      + S     +     IA R     V      L      F R
Sbjct: 62  LRDQVAALGYP-YFEVIDTPHVSDDYIYSSPVVGIASRFPLSEVAAVETSL--DGFHFHR 118

Query: 140 AGNRRAV----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
              R  +           ++   + + +    I                 S     Q+A 
Sbjct: 119 KPLRATLNHPALGQVDVYVVHFKSQRPMLHEPIGDTLVDAWQQELQGRWQSAMQRGQEAH 178

Query: 190 WLKDWI-TQKKESLVPFVIAGDFNRKINY--------------LGNNDDFWKTIDPNDSL 234
            L   I  +K++   P V+ GDFN+ ++                            +   
Sbjct: 179 LLHQAIVQRKQQRQHPVVLMGDFNQVLSSMEFAALRATHRFRQPETCRPLIPYHLLDSWT 238

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSR 288
           +      + R   +        +DY ++     +           Y+ +D          
Sbjct: 239 LFSHSGDEQRQPTHYTGAAGQVLDYILLSSEFSRDADYPIALVSDYHVEDQHLINPHFDT 298

Query: 289 GKRLSDHCPISIDYD 303
            +  SDH  +S+  +
Sbjct: 299 DRFASDHALVSVTVE 313


>gi|156402949|ref|XP_001639852.1| predicted protein [Nematostella vectensis]
 gi|156226983|gb|EDO47789.1| predicted protein [Nematostella vectensis]
          Length = 419

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 75/307 (24%), Gaps = 44/307 (14%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +   Q +R+++ N                 K+    +  + +       D+V LQE+
Sbjct: 5   AFVSGYKQNLRVLTLNCWG---------IPFISKQVKERFEHIAKELSTGKYDVVALQEV 55

Query: 75  GSYNA----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
            + +       K+     + +++ +  + +     S   I  +   R      L + +  
Sbjct: 56  WNKSDYAVMCDKLSSTLPYSLYFYSGVIGSGMCVFSRYRITNSFTYRFSLNGYLYKLWHG 115

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                +        A   +++   K I     HL +               +    QA  
Sbjct: 116 DWLAGTS-------AGYCVIDHPIKPIHFFVSHLHA-----EYNRQDDEYLAHRVTQAYQ 163

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               I    +     ++ GD N +   L            +  L    +          +
Sbjct: 164 FAQLIELITKPSDCVIVCGDMNSEPTDLCYRILCNLPGLTDTWLECNKEGYHGNTYGVSH 223

Query: 251 LRNKI---------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                IDY     +           +       I       SDH
Sbjct: 224 NSFAGSTFQQAIQKGPSDGIRIDYIFYRGDRSNM----ELLDCHVTMSRIPWEEISYSDH 279

Query: 296 CPISIDY 302
             +   +
Sbjct: 280 EGVLATF 286


>gi|329850335|ref|ZP_08265180.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
 gi|328840650|gb|EGF90221.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
          Length = 262

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 79/302 (26%), Gaps = 64/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N                   +   LL ++ +    D+  LQE+   +     
Sbjct: 1   MKLATWNVN----------------SVNARLPLLLEWFREAAPDVCALQEIKCIDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++           +A+  K               D  SR    
Sbjct: 41  ------KFPIEAFESLGYNCAVFGQKTWNGVAILSKFPLSDVTKGLPGDDSDEQSRY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E LVE   + +  + I+L +   L + +  Y        +  + L     Q      
Sbjct: 92  --IEALVEAP-QPVRFVGIYLPNGNPLGTDKFAYK------LRWLERLHARAAQLLTLEE 142

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTI-----------DPNDSLIRFPKEKDSRCNANK 249
             +I GDFN                  +             N              N   
Sbjct: 143 ATIITGDFNIIPTKADCWKESVWLDDALYQPAVRQAYQGLKNLGYTDAFDVMPPEGNRYT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L   +   I  +         + SDH P+ I
Sbjct: 203 FWDYQAGAWQKNEGIRIDHHLLSPQAADRL---NGLVIHKDTRGRTHDEAKPSDHVPVEI 259

Query: 301 DY 302
           + 
Sbjct: 260 EL 261


>gi|261208808|ref|ZP_05923245.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium TC 6]
 gi|289566402|ref|ZP_06446829.1| exodeoxyribonuclease III [Enterococcus faecium D344SRF]
 gi|294614472|ref|ZP_06694388.1| exodeoxyribonuclease III [Enterococcus faecium E1636]
 gi|260077310|gb|EEW65030.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium TC 6]
 gi|289161777|gb|EFD09650.1| exodeoxyribonuclease III [Enterococcus faecium D344SRF]
 gi|291592780|gb|EFF24373.1| exodeoxyribonuclease III [Enterococcus faecium E1636]
          Length = 250

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +    LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D+  R    
Sbjct: 45  LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +++  +  +        +             + L        +   
Sbjct: 92  ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +          +  N  +  F     ++    
Sbjct: 138 PVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  ++    L                      SDHCP+ 
Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHT-----------DIMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|226952709|ref|ZP_03823173.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. ATCC 27244]
 gi|226836550|gb|EEH68933.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. ATCC 27244]
          Length = 821

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 90/320 (28%), Gaps = 46/320 (14%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSYNAV 80
           +R  ++N+ N  + + G    + +  +   D     +    + +DADI  L E+ +    
Sbjct: 467 IRAAAFNVLNYDNGKNGFPTERGATSQAEFDKQHRKIVSAMRAIDADIYGLMEIANNGFG 526

Query: 81  AKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                        +  R +      R   + I  AI    K V+ + +   L    D   
Sbjct: 527 EDSAIAYLTRALGTDWRYVVPENLDRLGTDAIAVAIIYNSKRVKPVNKPVVL----DLGD 582

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCF--------LDSLENTYSPSCSLLSQQAQW 190
           +     A         + + V+  HLKS               ++          +  + 
Sbjct: 583 KNRTTIAQTFQPISGKQMLTVIPNHLKSKSCSGVNAASLDADQKDGQGCWNPTRVKAVEQ 642

Query: 191 LKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           L  W  +          ++ GD N             +  +    L      +  +  + 
Sbjct: 643 LIQWAAKNPTQVETPNILLLGDMNSYAKEDPI--LALEKANYKVLLNDKTIGQGEQAYSY 700

Query: 249 KN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289
                           +D+ + D N Y  + +     I  +E  +               
Sbjct: 701 VFGVSSNAEGYGGAGNLDHAIADSNLYSKVKKAFAWHINADEPTVLDYNEEYKNDEQKAL 760

Query: 290 ------KRLSDHCPISIDYD 303
                  R SDH P+ +D D
Sbjct: 761 FFAEDPYRSSDHDPVIVDID 780


>gi|115374765|ref|ZP_01462041.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
 gi|115368242|gb|EAU67201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
          Length = 327

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 91/325 (28%), Gaps = 60/325 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN-- 78
            +R+VS+N+                KR       +      LD   D+V LQE+ + +  
Sbjct: 9   PLRIVSYNVRYFGHALRGLASTQGPKR------RVSAALAALDPLPDVVCLQEVETSSFR 62

Query: 79  ---AVAKVFPKNTWC------------------IFYSTERLINHSKRDSNNDIHTAIAVR 117
              A  +  P  T                     + +     +H K    +   T +A+ 
Sbjct: 63  SSVAERRKVPGETQLQAFMGRMEEIFAAQGREMPYDAFYFRAHHYKLGDFSLYTTGLAIL 122

Query: 118 KKNVRVLQQSYPLLGAKDSFS--------RAGNRRAVELLV--EINGKKIWVLDIHLKSF 167
                +    + +                R  +R    + +    +G+   V + HL   
Sbjct: 123 VNRRTLRVDRHNVDEPSQITHHHVQRLKERKQSRICAHMRLLRTSDGRPFHVFNTHLSLP 182

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                              Q    +  +    +     PFV+ GDFN            +
Sbjct: 183 TPFAREFWATKDKMGCGVNQLHEARKLVALLTEHAQGEPFVVTGDFNSPPASP-----VF 237

Query: 226 KTIDPNDSLIRFP----KEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEI 278
           + +     L        +   S             ++ +D+ +   +  ++L      E 
Sbjct: 238 RYLCEEAQLTCAQAIVGQINPSAIRGFPTAGFMHLRMHLDH-LFSGSGVRWLD----MEE 292

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
                D+ SR   LSDH P+   + 
Sbjct: 293 TRPFGDVGSRFHGLSDHMPLIARFT 317


>gi|28198769|ref|NP_779083.1| exodeoxyribonuclease III [Xylella fastidiosa Temecula1]
 gi|28056860|gb|AAO28732.1| exodeoxyribonuclease III [Xylella fastidiosa Temecula1]
          Length = 262

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ SWN+N+L+                   + L+Q+      D++ LQE          
Sbjct: 1   MRIASWNVNSLN----------------VRLSQLQQWLVEAAPDVLGLQET--------- 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +    +    +  +A+  +      Q                R
Sbjct: 36  -KLEDHQFPEAALAALGYVSVYAGQKTYNGVALLARVALEDVQV------GIPEFEDVQR 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V+     I V+++++ +   + + +  Y  S          +  W+ ++ +   
Sbjct: 89  RVIAATVD----GIRVVNLYVVNGQEVGTDKYAYKLS------WLDAVYHWLAEELQRYP 138

Query: 204 PFVIAGDFNRKINYLGNND-----------------DFWKTIDPNDSLIRFPKEKDSRCN 246
             V+ GDFN   +     D                    K +     L    +       
Sbjct: 139 RLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAALDKLLGLG--LHDGFRLHHQDAG 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++ +      +           D +    +R SDH P
Sbjct: 197 IFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGI-------DRVPRGWERPSDHAP 249

Query: 298 ISIDY 302
             I+ 
Sbjct: 250 AWIEL 254


>gi|320163246|gb|EFW40145.1| hypothetical protein CAOG_00670 [Capsaspora owczarzaki ATCC 30864]
          Length = 1153

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 75/299 (25%), Gaps = 55/299 (18%)

Query: 15   PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +   ++ +R+ S N +                        +       D D++  QE 
Sbjct: 899  SASLLQSRILRVASLNTHM-----------GISANYQVQLDGIVTALLAEDVDVLGCQEF 947

Query: 75   GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                 +A       W         + ++     +       +  K   +      L    
Sbjct: 948  SRGLLMAGGIDMLAWLSARLDMPYVTYNPTYDTSG---GDILLSKFPFIASGRVALPSGV 1004

Query: 135  DSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
               SR   R  +   + I G  K + ++  HL                      Q   + 
Sbjct: 1005 SQQSR---RGMIWAALSIPGTTKPVTLVTTHLHH----------AERDHETRIAQLDAII 1051

Query: 193  DWIT-------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              ++        +   +   V+ GD N             + +  +      P+ + ++ 
Sbjct: 1052 SAVSSIPLPDSAQPPEIRRVVVFGDLNSVPGGPEAELAQSRGLVDSW-----PELEQAQG 1106

Query: 246  NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +       D+ +  ++     I                    +SDH P+   ++F
Sbjct: 1107 YTFHSRNPTQRFDWLLHSRDVTCKSISV--------------LDLTVSDHKPVVASFEF 1151


>gi|13472690|ref|NP_104257.1| hypothetical protein mll3063 [Mesorhizobium loti MAFF303099]
 gi|14023437|dbj|BAB50043.1| mll3063 [Mesorhizobium loti MAFF303099]
          Length = 302

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 87/328 (26%), Gaps = 84/328 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           ++LVS+NI      +G             D +   +      ADI+ LQE+         
Sbjct: 1   MKLVSYNIQYGFGSDG-----------RYDLSRAARIVD--GADIIALQEVERHWQRSRF 47

Query: 75  -GSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                 ++++     W     +  +       R  N        V  K   V  + + L 
Sbjct: 48  DDQPELLSRLLSGYHWVYGPAFDMDASERRDGRLINRRRQFGTMVLSKLPIVWSRLHALP 107

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +          A+E ++      + VL +HL               +     +Q  +L
Sbjct: 108 MRRTLRPLNTRNAALECMIRTPAGPVRVLSLHLAH------------IAAEERLEQIDYL 155

Query: 192 KDWITQKKESLVPF------------------------VIAGDFNRKINYLGNNDDFWKT 227
                +      P+                        +  GDFN +           +T
Sbjct: 156 LAEHRRAPSEGGPWSGIDDEPSRNWTSGEIEPENPLAAIWMGDFNMEPGSAEYRRIVGRT 215

Query: 228 --------IDPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQESF 275
                   +D          E     + ++        K  +D+  +     + +     
Sbjct: 216 PYHRGAAYLDGFVDAAAVAIELAGDFHTHEKIIDGRLAKRRLDHCFVGGVFARRVRSV-- 273

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        G+  SDH P+ +D D
Sbjct: 274 ---------RSDIGEMASDHFPVRVDID 292


>gi|69245045|ref|ZP_00603203.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium DO]
 gi|314939354|ref|ZP_07846596.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a04]
 gi|314944126|ref|ZP_07850782.1| exodeoxyribonuclease III [Enterococcus faecium TX0133C]
 gi|314949042|ref|ZP_07852404.1| exodeoxyribonuclease III [Enterococcus faecium TX0082]
 gi|314953542|ref|ZP_07856453.1| exodeoxyribonuclease III [Enterococcus faecium TX0133A]
 gi|314994499|ref|ZP_07859775.1| exodeoxyribonuclease III [Enterococcus faecium TX0133B]
 gi|314998115|ref|ZP_07863002.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a01]
 gi|68196046|gb|EAN10478.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium DO]
 gi|313587883|gb|EFR66728.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a01]
 gi|313591110|gb|EFR69955.1| exodeoxyribonuclease III [Enterococcus faecium TX0133B]
 gi|313594421|gb|EFR73266.1| exodeoxyribonuclease III [Enterococcus faecium TX0133A]
 gi|313597294|gb|EFR76139.1| exodeoxyribonuclease III [Enterococcus faecium TX0133C]
 gi|313641358|gb|EFS05938.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a04]
 gi|313644519|gb|EFS09099.1| exodeoxyribonuclease III [Enterococcus faecium TX0082]
          Length = 269

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +    LDAD   LQE     A    
Sbjct: 20  LKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 63

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D+  R    
Sbjct: 64  LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 110

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +++  +  +        +             + L        +   
Sbjct: 111 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 156

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +          +  N  +  F     ++    
Sbjct: 157 PVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 216

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  ++    L                      SDHCP+ 
Sbjct: 217 SWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAKIHT-----------DIMGSDHCPVE 265

Query: 300 IDY 302
           +D 
Sbjct: 266 LDL 268


>gi|327537764|gb|EGF24469.1| endonuclease/exonuclease/phosphatase [Rhodopirellula baltica WH47]
          Length = 229

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 69/221 (31%), Gaps = 39/221 (17%)

Query: 5   YVLALVFFLVPCTASVAQK--------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
              A   F++   + +AQ+        +R++S+NI+     +G             D   
Sbjct: 24  IAFASFAFVLRSPSVLAQEPETNSTIRLRVLSYNIHHGRGTDG-----------KIDLDR 72

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L    ++ D D+V +QE+        +       +   T      +K+   +      AV
Sbjct: 73  LANVIRSADPDLVAVQEVDQDTRRNGMVN-QVETLAVQTSLHGKFAKQIDYDGGEYGQAV 131

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K      + + L G          R      + I+  ++     HL            
Sbjct: 132 LSKYPVESLEVHWLPGDPI----RERRIVGVAEILIHETRLRFATTHLHHSRAD------ 181

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
                 L  +QA  L   +        P +IAGDFN K   
Sbjct: 182 ------LREKQATELNRLLAC---GSTPVIIAGDFNAKPAS 213


>gi|162148012|ref|YP_001602473.1| exodeoxyribonuclease III [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786589|emb|CAP56171.1| putative exodeoxyribonuclease III [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 259

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N                        +  + +    D++ LQE+   +A    
Sbjct: 2   MKIASWNVN----------------SVRQRQAHVLDWLEREKPDLLGLQEIKCEDA---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142
                        R   +         +  +A+  +    V  ++ P L  +   +R   
Sbjct: 42  ------SFPAEAFRAAGYDCVVVGQKSYNGVAILSRLPFSVTARALPFLDGEALQAR--- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                + +E  G  +   +++L +     S       +        + L        E+ 
Sbjct: 93  ----YVEIEAGG--LTFGNLYLPNGNSGGSAGYEAKLAF------MEALALHARALLEAG 140

Query: 203 VPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             FV+AGD+N                       +   ++ +                   
Sbjct: 141 RDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAAFRRLIWLGLTDALRALHPHGRYY 200

Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID+ ++     + L            D  +    + SDH P+ 
Sbjct: 201 TFWDYQAGAWPRDCGLRIDHALLSPRIAERLDSA-------QPDRDERGRAQPSDHVPLV 253

Query: 300 IDYD 303
           I  D
Sbjct: 254 ITLD 257


>gi|315921153|ref|ZP_07917393.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695028|gb|EFS31863.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 269

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 71/280 (25%), Gaps = 43/280 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+++S+NI               V         + Q  K ++ D+  LQE  +     + 
Sbjct: 30  VKVMSYNI----------YSGQKVYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVEN 79

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  +     K    +       +  K     + +Y L   + +      R
Sbjct: 80  ADIIALMKEVTGMQYAFFVKTRDVDGGEYGNLILSKYPISDEVNYDLPRIE-TVEDVYPR 138

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  E  GK  +    HL       +  N  S                + + K    
Sbjct: 139 SMGVVKTEKEGKNFYFGVTHLSHVGNETNRINQTST--------------ILEKTKGMDA 184

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GDFN   +         K +     +                      ID+ +  
Sbjct: 185 PMILTGDFNALADSGP-----MKILYERFDIGCLNGNYGLTTGT---PVPVKAIDFVLYT 236

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              Y E          SDH P+   + 
Sbjct: 237 PDKGMAPKAYDVYYDAYVE----------SDHFPVVATFS 266


>gi|260172870|ref|ZP_05759282.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2]
          Length = 277

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 71/280 (25%), Gaps = 43/280 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+++S+NI               V         + Q  K ++ D+  LQE  +     + 
Sbjct: 38  VKVMSYNI----------YSGQKVYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVEN 87

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  +     K    +       +  K     + +Y L   + +      R
Sbjct: 88  ADIIALMKEVTGMQYAFFVKTRDVDGGEYGNLILSKYPISDEVNYDLPRIE-TVEDVYPR 146

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  E  GK  +    HL       +  N  S                + + K    
Sbjct: 147 SMGVVKTEKEGKNFYFGVTHLSHVGNETNRINQTST--------------ILEKTKGMDA 192

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GDFN   +         K +     +                      ID+ +  
Sbjct: 193 PMILTGDFNALADSGP-----MKILYERFDIGCLNGNYGLTTGT---PVPVKAIDFVLYT 244

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              Y E          SDH P+   + 
Sbjct: 245 PDKGMAPKAYDVYYDAYVE----------SDHFPVVATFS 274


>gi|327190170|gb|EGE57275.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512]
          Length = 267

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 76/307 (24%), Gaps = 68/307 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              + +WNIN                       ++ Q       DI+ LQE    N +  
Sbjct: 2   SFSVTTWNIN----------------SVRLRMPIVEQLVLKHRPDILCLQETKVPNELFP 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P            +            +  +A+  +   +        G  D+      
Sbjct: 46  AAPL---------RAMGYDHIIIHGQKGYHGVAIASRIPLIEDHRQDYCGVGDARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +  + E   ++I + + ++ +    D  + T +P         + +   +    E+ 
Sbjct: 93  ---ISAIFERGNRRIRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEAN 146

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GD N                   +     D   + +     L    +   +   
Sbjct: 147 TSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLLEVMRRGAWLDLMRQHVPASEK 206

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+     +    L                    R SDH 
Sbjct: 207 LYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLK-------RIEILKEARGWDRPSDHV 259

Query: 297 PISIDYD 303
           P++  +D
Sbjct: 260 PVTAHFD 266


>gi|237510534|ref|ZP_04523249.1| metal-dependent hydrolase [Burkholderia pseudomallei MSHR346]
 gi|235002739|gb|EEP52163.1| metal-dependent hydrolase [Burkholderia pseudomallei MSHR346]
          Length = 338

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 78/286 (27%), Gaps = 58/286 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               +++R+ ++NI+                 T S    +      L AD++ LQE+   
Sbjct: 47  QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVP-- 93

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             +  V   +      +   +        +        AV  +      +   L     S
Sbjct: 94  --LGGVRGADVLAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----S 146

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F     R A++  +E     + V+  HL               S +  S Q   L   + 
Sbjct: 147 FGNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LA 190

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N         + F +       +  F +    R            
Sbjct: 191 AFDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS-- 239

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +     ++L+  +                   DH P+    
Sbjct: 240 LDRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275


>gi|163786739|ref|ZP_02181187.1| hypothetical protein FBALC1_16177 [Flavobacteriales bacterium
           ALC-1]
 gi|159878599|gb|EDP72655.1| hypothetical protein FBALC1_16177 [Flavobacteriales bacterium
           ALC-1]
          Length = 359

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/341 (12%), Positives = 91/341 (26%), Gaps = 55/341 (16%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVS---WNINTLSEQEGVSLWKN------------SVKR 49
            ++  VF  +   A   +K ++ +   +N+  L +     +  +              + 
Sbjct: 8   IIVVFVFAFLNVNAQQKKKFKIHTVAFYNLENLFDSINDPVKFDEASPIMEMNKANRAEV 67

Query: 50  TTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102
                  + +   ++          I+ + E+ +   +  +            +  I H 
Sbjct: 68  YEKKVKNMARVVADIGYEDTKNTPAILGVSEVENRQVLVDLVNDPQ---LLQKDYGIIHF 124

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIWVL 160
                  I  A+  +K   + +  S   L   D  +R     R  + +  E+ G  I V+
Sbjct: 125 DSPDARGIDVALLYQKSLFKPISTSSHELLIYDDLTRKRVYTRDQLLVSGELEGDLIHVI 184

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             H  S    ++       + + L+++       I    +     +  GD N        
Sbjct: 185 VNHWPSRSGGEARSRPKRVAAARLNKRIIDSLQSIDPYAK----IITMGDLNDDPTNASV 240

Query: 221 NDDFWKTIDP-----NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF------ 269
            D       P             +       +N         D  +M Q   +       
Sbjct: 241 KDILKAERKPKKVGFKGIYNPMEEFFKKGLGSNAYRDAWSLFDQILMTQPFLEKDYSSFR 300

Query: 270 -LIQESFSEILYNEDDIKSRGK------------RLSDHCP 297
                 F++        + +G               SDH P
Sbjct: 301 FYKAGIFNKYYLTNKRGRWKGYPFRSFADGGFTGGFSDHFP 341


>gi|237714559|ref|ZP_04545040.1| exodeoxyribonuclease [Bacteroides sp. D1]
 gi|262406425|ref|ZP_06082974.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_22]
 gi|294643303|ref|ZP_06721129.1| exodeoxyribonuclease III [Bacteroides ovatus SD CC 2a]
 gi|229445328|gb|EEO51119.1| exodeoxyribonuclease [Bacteroides sp. D1]
 gi|262355128|gb|EEZ04219.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_22]
 gi|292641426|gb|EFF59618.1| exodeoxyribonuclease III [Bacteroides ovatus SD CC 2a]
 gi|295083963|emb|CBK65486.1| exodeoxyribonuclease III [Bacteroides xylanisolvens XB1A]
          Length = 254

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L       L                ++    + DI+ LQE          
Sbjct: 2   MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +                +    ++ +A+  K        +   G          R
Sbjct: 39  LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKREP----DHVEYGMGMEAYDNEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D  +       +      +  + ++ + ++S  
Sbjct: 95  F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVMELQKSRP 142

Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD+N                         +   + +             + +   
Sbjct: 143 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDSFRTLCPEKQEYT 202

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R           IDY ++ +     L +        +           SDHCP+++
Sbjct: 203 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 251

Query: 301 DY 302
           + 
Sbjct: 252 EI 253


>gi|227820280|ref|YP_002824251.1| exonuclease [Sinorhizobium fredii NGR234]
 gi|227339279|gb|ACP23498.1| probable exonuclease [Sinorhizobium fredii NGR234]
          Length = 257

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                     L  +    + D+V LQE+ + +     
Sbjct: 1   MKIATFNINGVN----------------KRLENLLAWLDAAEPDVVCLQELKATDG---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S      +            +A+  ++   +     L G     S   +R
Sbjct: 41  ------QFPKSAIEAAGYGAVWRGQSAWNGVAILARDSEPVLTRTELPGDP---SDTQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I +  ++  +       +  Y  +          L     +  E+ +
Sbjct: 92  YIEAAV-----NGILIAALYAPNGNPQPGPKFDYKLAWHRR------LAGHAAELLETGL 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR--CN 246
           P V+AGD+N                           ++ +     L    K         
Sbjct: 141 PVVLAGDYNIVPEPRDIYPTRSYDDNALVQPESRAAFRQLLDQGWLDALRKVYPDEELFT 200

Query: 247 ANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                RN+        +D+ ++ +   + L            D      +  SDH P+ I
Sbjct: 201 FWDYRRNRWQRNAGLRLDHILLSRKLARRLTGGGI-------DRDVRGQENASDHAPVWI 253

Query: 301 DYD 303
             +
Sbjct: 254 ALE 256


>gi|145606629|ref|XP_364566.2| hypothetical protein MGG_09360 [Magnaporthe oryzae 70-15]
 gi|145014310|gb|EDJ98878.1| hypothetical protein MGG_09360 [Magnaporthe oryzae 70-15]
          Length = 296

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 76/300 (25%), Gaps = 14/300 (4%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
                 +  T ++   +R++S+NI   +        +    R     T L     N    
Sbjct: 4   TAFTASLLATTALCTPLRIISYNIRQ-AVVIPTIGERPWADRRPLLTTQLSYETSNRPES 62

Query: 68  IVFLQEMGSYNAVAKVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           ++ +QE+     V  V     TW                S             N      
Sbjct: 63  LLCMQEVLRQQLVDVVGGTEGTWAHVGVGRDDGGDGGEFSPILYRPDTWELDANRTYWLS 122

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             P +     +  A  R      +        V+ +               +     L+ 
Sbjct: 123 ETPDVPGSKGWDAAYPRVVTAARLRHRQTGGRVVLLCTHFDHMGQVARERSADMIVDLAG 182

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           + +           S  P   AGD N                D  D +       ++   
Sbjct: 183 EWES-----DDGGASKSPVFFAGDLNSDDQNQAYKTLATAMRDSRDLVPEQRLHGNTNTY 237

Query: 247 ANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        +D+  +   +   L  + +S +     +    G  +SDH P+ +D D
Sbjct: 238 TAFTALLTWDDKRLDHVFVKDPSVGGLRFDGYSVLS----NRFDDGIFISDHRPVVLDVD 293


>gi|262341194|ref|YP_003284049.1| exodeoxyribonuclease [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272531|gb|ACY40439.1| exodeoxyribonuclease [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 253

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 93/304 (30%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++++S+NIN +                      L  + ++ + DI+ LQE+ +       
Sbjct: 1   MKIISYNINGIRSGINKG---------------LSDWIESSNPDILCLQEIKAFPEQIDT 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F +  +  ++ +     +S           I  ++K + V        G   S     
Sbjct: 46  NIFDQLGYNHYWFSSEKKGYSG--------VGILCKEKPIHVE------YGIGLSSIDQE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     ++ I+ K + ++ ++L S   +    N             + +++        
Sbjct: 92  GR-----VLRIDMKNLSIISLYLPSGNNMKKRLNFKFFFMKNFFSHVKKIRNQFNH---- 142

Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247
               +I GD+N   + +   D                W T   N   +   +      + 
Sbjct: 143 ---LIICGDYNICHHEIDIYDPMKHQEISGFLPEEREWMTHFLNLGFVDSFRNCVQEAHH 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY ++  +  + +                    +LSDHCP+
Sbjct: 200 YSWWSYRSNARKNNKGWRIDYVMVSSSLKEKIRNA-----------YLLSDVKLSDHCPV 248

Query: 299 SIDY 302
            ++ 
Sbjct: 249 VLEI 252


>gi|227552171|ref|ZP_03982220.1| exodeoxyribonuclease III [Enterococcus faecium TX1330]
 gi|257892875|ref|ZP_05672528.1| exodeoxyribonuclease [Enterococcus faecium 1,231,408]
 gi|227178703|gb|EEI59675.1| exodeoxyribonuclease III [Enterococcus faecium TX1330]
 gi|257829254|gb|EEV55861.1| exodeoxyribonuclease [Enterococcus faecium 1,231,408]
          Length = 269

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +    LDAD   LQE     A    
Sbjct: 20  LKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 63

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D+  R    
Sbjct: 64  LDLPGYYQYWN----------YAERKGYSGTAIFAKEPALNATYGMGIDIHDTEGRL--- 110

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +++  +  +        +             + L        +   
Sbjct: 111 ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 156

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +          +  N  +  F     ++    
Sbjct: 157 PVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 216

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  ++    L                      SDHCP+ 
Sbjct: 217 SWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHT-----------DIMGSDHCPVE 265

Query: 300 IDY 302
           +D 
Sbjct: 266 LDL 268


>gi|224539358|ref|ZP_03679897.1| hypothetical protein BACCELL_04263 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519019|gb|EEF88124.1| hypothetical protein BACCELL_04263 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 529

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 86/307 (28%), Gaps = 41/307 (13%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
             C       +++VS+N+    +          V   +     +    + L ADI  L E
Sbjct: 143 TSCDTPETYNLKVVSFNLEHFGKN---------VNTYSLKLPKVALALQALQADIYALVE 193

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +     + ++                  ++   +N    A  +   +      +  L   
Sbjct: 194 VEGAAGLEELCQLLNRNC----NTQKYKTRYYKDNVQGMACFIYNSDAVTPVGAISLNKL 249

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLSQQ- 187
            D++     + A    +  N ++  +   H KS    +       +     + +    Q 
Sbjct: 250 ADNYL-PERKTAQGFQLNSNQERFILCCNHWKSKSGSNVPEQYKDKGDGQGAYNPRRVQE 308

Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           A+    +I +  +  +    ++ GD N             +T++    +           
Sbjct: 309 AEATLKFIKEITKTYNDPDVLVVGDLNAYTCEDPI-----RTLENGGLVNLLTTYA-PNQ 362

Query: 246 NANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNED---------DIKSRGKRL 292
            +     N       +D+ +      K +       I  +E            K    R 
Sbjct: 363 YSYAYFSNGSYAVGYLDHSLATSTLEKQVTDARPFRINADEPQKMDVDQSGVQKDNMYRC 422

Query: 293 SDHCPIS 299
           SDH PI 
Sbjct: 423 SDHSPIV 429


>gi|124266264|ref|YP_001020268.1| hypothetical protein Mpe_A1072 [Methylibium petroleiphilum PM1]
 gi|124259039|gb|ABM94033.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 270

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 93/300 (31%), Gaps = 50/300 (16%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++P  +   +++R+ ++NI+           +        +   L    + LDAD+V LQ
Sbjct: 8   VLPPASGDERRLRVATYNIH--------KGVRGVGPAKRLEIHNLGLAIEALDADLVCLQ 59

Query: 73  EMGSYNAVAK--------VFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRV 123
           E+  ++             +P+     F + E   + +             A+  +    
Sbjct: 60  EVRRFHKRDARRFDRTSFGWPQQGQAEFLAPEGYDVAYRTNAITRHGEHGNALLSRWSIG 119

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
               + +     S  R   R  + + V   G+ +  +  H                S S 
Sbjct: 120 EPNHHDV-----SDHRFEQRGLLHVQVNWQGRAVDTIVAHFGL-------------SHSS 161

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             +Q Q L  ++ Q+ +  VP ++AGDFN     L       +              + S
Sbjct: 162 RLRQVQRLAAFVRQELDPAVPLLVAGDFNDWGERLDG--AMQEAGLRRAVAPSAKGLQRS 219

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +        +D                    +       +   R+SDH P+  +++
Sbjct: 220 LTFPSLAPVF--ALDRVYTRG-----------WRCVSTFVPRGATWARMSDHLPLVAEFE 266


>gi|323490286|ref|ZP_08095501.1| exodeoxyribonuclease III [Planococcus donghaensis MPA1U2]
 gi|323395956|gb|EGA88787.1| exodeoxyribonuclease III [Planococcus donghaensis MPA1U2]
          Length = 251

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 71/304 (23%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +   ++AD+  LQE+         
Sbjct: 1   MKLISWNVNGLRAVMKKGFM---------------DFFTEVNADVFCLQEIKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S           +AV+                         R
Sbjct: 45  MDLPGYYTYWNYAHKKGYSGTAIFTKQK-PVAVQYGLGLEEL-------------DTEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V+ ++  +        +        +    + L        ++  
Sbjct: 91  I-----ITLEFDSYYVITVYTPNSQHGLLRLDYRLLWEEAILSFVKTL--------DNHK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                                 +  +  F           
Sbjct: 138 PVLLCGDLNVAHEEIDLKNPKANKKNSGFTPEERSKMTQFLESGFVDTFRYFYPEEEGHY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  Q     L                 +    SDHCP+ 
Sbjct: 198 SWWSYRSNCREKNVGWRIDYFLASQRLVPELQNAKIH-----------KDIWGSDHCPVE 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 LQIE 250


>gi|297816036|ref|XP_002875901.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321739|gb|EFH52160.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/337 (13%), Positives = 98/337 (29%), Gaps = 87/337 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + V+WN N+             + R  +D++   ++  + D D++ +QE+    A  K  
Sbjct: 364 KFVTWNANSF------------LLRVKNDWSQFSKFVSDFDPDVIAVQEVRMPAAGGKGK 411

Query: 85  PKNTWCI----------------FYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQS 127
           PKN   +                  S+    N+    S  +  +   A+  K     ++ 
Sbjct: 412 PKNPEELSDDTKVLREEKQILTRALSSPPFGNYRVWWSLADSKYAGTALLVKKCFKPKKV 471

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y  L    S      R  +        +   +L+ +  +     +       S     + 
Sbjct: 472 YFNLDKLASKHEPDGRVILA-----EFETFRLLNTYSPN-----NGWKEEENSFQRRRKW 521

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY------------------------------ 217
            + + +++   K S  P +  GD N                                   
Sbjct: 522 DKRIVEFLN--KTSDKPLIWCGDLNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGF 579

Query: 218 -LGNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYFVMDQNA 266
                  F +T+     +  +               S     K    ++ IDYF++ +  
Sbjct: 580 TPSERRRFGETMKEGMLVDAYRYLHKEQDMESGFSWSGNPIGKYRGKRMRIDYFLVSEQL 639

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++           +     G   SDHCP++++  
Sbjct: 640 KDRIVSCKMHGRGIELE-----GFYGSDHCPVTLELS 671


>gi|154149895|ref|YP_001403513.1| exodeoxyribonuclease III Xth [Candidatus Methanoregula boonei 6A8]
 gi|153998447|gb|ABS54870.1| exodeoxyribonuclease III Xth [Methanoregula boonei 6A8]
          Length = 269

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 83/307 (27%), Gaps = 65/307 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-- 79
           +K++L+SWN++ L  +     +                    +D DI+ LQE  +     
Sbjct: 2   EKLKLISWNVDGLRARCKAGQFIK---------------LLQVDFDILCLQETKTPELDI 46

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             ++     +   +S  +  +             + +  K                +   
Sbjct: 47  PQEIRSDKKYYSHFSEVQKGS----------FAGVGILSKIECRQISD----NFGGTKFD 92

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  +         +  +L+I+        + +     + S   +    L  ++ +  
Sbjct: 93  KEGRILIA-----EYDRFTLLNIYFPLG----AGKPDTPDTLSHKLEFYDTLLGFVKELL 143

Query: 200 ESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                 +I GDFN                         +    ++    +  F  +  + 
Sbjct: 144 SQKKNVIICGDFNIAHKDKDLVNAKTTPLIVGIYPEEREKLNELERLGFVDAFRYKHPNL 203

Query: 245 CNANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              ++               +DYF +       + +          D         SDHC
Sbjct: 204 VRYSRWPYQNNSRELNLGWRLDYFFVSAGLKDSITESEMLYHPGESDSHP--QIAGSDHC 261

Query: 297 PISIDYD 303
           PI+++  
Sbjct: 262 PITLELS 268


>gi|319780773|ref|YP_004140249.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166661|gb|ADV10199.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 268

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 75/309 (24%), Gaps = 72/309 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
              + +WNIN                       ++ +       D++ LQE  +      
Sbjct: 2   PFSIATWNIN----------------SVRLRMPIVERLLVEHAPDVLCLQETKVPDELFP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K F K  +                     +  +A   +    L +       +DS    
Sbjct: 46  EKAFRKLGYEHIA-----------FHGQKGYHGVATVARRPIELVEKRRFCEIEDSRH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                + + V   GK I + + ++ +    D  +   +            +   I  + +
Sbjct: 93  -----LSVTVRAGGKAILLHNFYVPAG--GDEPDPVINRKFKHKLDFVAEMNA-IRAEHD 144

Query: 201 SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            +   V+ GD N                   +     ++F       + +          
Sbjct: 145 EVSGSVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETENFEAMRRAGNWVDLMRLNVPDE 204

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+     N              Y    +    +R SD
Sbjct: 205 QKLYTWWSYRAQDWELSNRGRRLDHVWSSPNLVPSFSG-------YEILRLARGWERPSD 257

Query: 295 HCPISIDYD 303
           H P+   +D
Sbjct: 258 HVPVIARFD 266


>gi|293571415|ref|ZP_06682444.1| exodeoxyribonuclease III [Enterococcus faecium E980]
 gi|291608506|gb|EFF37799.1| exodeoxyribonuclease III [Enterococcus faecium E980]
          Length = 250

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +    LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D+  R    
Sbjct: 45  LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +++  +  +        +             + L        +   
Sbjct: 92  ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +          +  N  +  F     ++    
Sbjct: 138 PVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  ++    L                      SDHCP+ 
Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHT-----------DIMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|288917788|ref|ZP_06412150.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
 gi|288350844|gb|EFC85059.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
          Length = 452

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 90/297 (30%), Gaps = 36/297 (12%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGS 76
           +       ++++NI  L E    +                    + L   DIV +QE   
Sbjct: 36  SPAGGSFSVLTYNIAGLPEALSSAETP--------RAESTTTIGQRLGPYDIVQVQE--D 85

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +N  + ++  +T   + +            N               + + ++      DS
Sbjct: 86  FNYHSYLYDGDTTHAYRTPTSGGVPFGSGLNTLSKVG------YSDLDRVTWDDCSTFDS 139

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 +      + + G+ ++V   +L +     S + +   S          L  +I+
Sbjct: 140 ADCLTPKGFTLKRIRL-GEGVYVDFYNLHADAGTTSADTSARASN------LSQLASYIS 192

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR---------FPKEKDSRCNA 247
               +    V+ GD N +    G+    +   +                        C+ 
Sbjct: 193 SH-SAGNAVVVMGDTNARYTRTGDTIAAFAAANGLTDAWVKLERGGVAPATGSTALVCDE 251

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +D  +   +++  L    +     N D + S G  LSDH PI++D+ +
Sbjct: 252 AAPTDTCEVVDKVLYRGSSFVTLNATGY--ANRNADFLNSAGVMLSDHFPIAVDFSW 306


>gi|281417190|ref|ZP_06248210.1| exodeoxyribonuclease III Xth [Clostridium thermocellum JW20]
 gi|281408592|gb|EFB38850.1| exodeoxyribonuclease III Xth [Clostridium thermocellum JW20]
          Length = 251

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 74/302 (24%), Gaps = 78/302 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L                         Y K  DADI  +QE           
Sbjct: 3   KLISWNVNGLRACINKGF---------------LDYFKKADADIFCIQESKVQPG-QIEL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
             + +  +++      +S       I                  PL           +R 
Sbjct: 47  ELDGYHQYWNYAERKGYSGTAVFTRIK-----------------PLYVQNGIGIDEHDRE 89

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              + +E +    ++++++  +        +               L        ++  P
Sbjct: 90  GRVITLEFDN--YYLVNVYTPNAKKELERLDYRMKWEDDFRNYLVGL--------KAKKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GD N                           +  +     +  F      +  A  
Sbjct: 140 VIVCGDMNVAHKEIDLKNPESNRRSAGFTDEERAKFTELLNAGFIDTFRFFYPDKTGAYT 199

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDYF + +     L+  S  +               SDHCP+ +
Sbjct: 200 WWSYMFNARARNAGWRIDYFCVSEELKDRLVSASIHD-----------DVMGSDHCPVEL 248

Query: 301 DY 302
             
Sbjct: 249 QI 250


>gi|295699065|ref|YP_003606958.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
 gi|295438278|gb|ADG17447.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
          Length = 269

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 88/304 (28%), Gaps = 70/304 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+ ++NIN                   S    L Q+ +    D+V LQE+    AV  
Sbjct: 3   KLRIATFNING----------------IRSRQAALLQWLEREAPDVVCLQEL---KAVDS 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP +         R   +            +A+  K    L++   L G +D      +
Sbjct: 44  AFPVD-------ALREAGYGSVWQGQSAWNGVAILAKGDAPLERRRGLPGFEDDTH---S 93

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     +       + ++ ++L +       +  Y  +          L     Q  ES 
Sbjct: 94  RYIEAAV-----GGVLIVCLYLPNGNPQPGPKFDYKLA------WFDHLIAHAAQLYESG 142

Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246
            P VIAGDFN         +                 + K +    +        D R  
Sbjct: 143 HPVVIAGDFNVVPTDEDIYNPRSWLKDALLQPESRERYRKLLAQGWTDALRTHFGDERVY 202

Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              +   +         ID+ ++  +    L            D         SDH P  
Sbjct: 203 TFWDYFRRHWDTNSGLRIDHLLLSADLAPRLRNAGV-------DRWVCGEPHASDHAPTW 255

Query: 300 IDYD 303
           I+ +
Sbjct: 256 IELE 259


>gi|324329013|gb|ADY24273.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 352

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 108/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S  +T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKAQTETNLKSMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSM--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N GK + ++++HL +        
Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|315303668|ref|ZP_07874193.1| exodeoxyribonuclease III [Listeria ivanovii FSL F6-596]
 gi|313627958|gb|EFR96566.1| exodeoxyribonuclease III [Listeria ivanovii FSL F6-596]
          Length = 251

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 84/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y  ++DADI  LQE     A    
Sbjct: 1   MKLISWNVNGLRAVVKKGF---------------LEYFDSVDADIFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPGYKDYWN----------YAVKKGYSGTAIFTKKEPLSVQYGLGIEEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +                        +  ++ +  +   
Sbjct: 91  -----VITLEFENFFMVTVYTPN-------SQAELKRLDYRMTFEDAILAYVKK-LDETK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           +        +  F        +A 
Sbjct: 138 PVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTAFLEAGFVDSFRYFYPDLEDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDNLVDAKIHPDVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|228988325|ref|ZP_04148418.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228771390|gb|EEM19863.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 352

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 108/325 (33%), Gaps = 70/325 (21%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + ++ ++NI               G     +S ++T  +   +  + +N ++D   LQ
Sbjct: 52  GNEFKVTTFNIGYGGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFALLQ 111

Query: 73  EMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           E+            +  + K  P         +   +    + N             ++ 
Sbjct: 112 EVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGLST 166

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSL 173
             K      + + L G +    R  +  R  VE  + +N GK + ++++HL +       
Sbjct: 167 FSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEYTIPVNNGKHVRLVNLHLSA------- 219

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
              Y     +  QQ ++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P   
Sbjct: 220 ---YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWL 276

Query: 234 LIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSE 277
           +       D       +                      ID F++  N    ++     +
Sbjct: 277 VELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKD 334

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
           + +            SDH P+S  +
Sbjct: 335 LKFEN----------SDHNPVSAVF 349


>gi|163787900|ref|ZP_02182346.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
 gi|159876220|gb|EDP70278.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
          Length = 340

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 90/287 (31%), Gaps = 57/287 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + + ++S+N+   +    +                + ++      +I+ LQE        
Sbjct: 98  KNISVMSYNVRLFNIYSWLPSETVKKD--------IIEFIHKEKPEILCLQEYRKD---D 146

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   N +    S +  +                V  K   +   S       ++     
Sbjct: 147 PIVLDNYYNFNASHKDTVKR-----------GQVVFSKFPIINSGSLEFPNTFNN----- 190

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA--------QWLKD 193
               + + +      I V ++HL+S      +E   + +   L +Q         + ++ 
Sbjct: 191 ---GIFVDIVKQKDTIRVYNLHLQSSGIQTDVEALKNETSDNLFKQVGSTFKLQQEQVEL 247

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           ++  K +     ++ GDFN            +K I  N+ +  F +  +           
Sbjct: 248 FLKHKSKCNYKTIVTGDFNNTA-----YSYIYKEIKGNNLVDTFEEAGNGFGKTYDFKFF 302

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            + ID+ + D++              +  +  K+   +LSDH PI  
Sbjct: 303 PMRIDFILADKD--------------FTVNGFKTYDVKLSDHYPIKA 335


>gi|153008297|ref|YP_001369512.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188]
 gi|151560185|gb|ABS13683.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188]
          Length = 268

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 82/306 (26%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                       L+ Q+ ++   D++ LQE         +
Sbjct: 3   FSVATWNIN----------------SVRLRMPLVEQFLRDYQPDVLCLQETKCP---DNL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                S    +  +A   +      +        D        
Sbjct: 44  FPSKGFRAL------GYEHIAISGQKGYHGVATISRRHLTGVEKIGFCDMGDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  +VE  GKK+ + + ++ +    D  +   +P  +      + ++  +  +K+   
Sbjct: 93  --LSAVVEAGGKKLRIHNFYVPAG--GDEPDPVINPKFAHKLAFLEEMRAIVADRKDGHS 148

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N     N + ++    K +                        +   +    
Sbjct: 149 SVLV-GDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRVKGGWSDLMRQLIPADQKI 207

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +   ++                    R SDH P
Sbjct: 208 FTWWSYRAKDWAESDRGRRLDHVWGSADLEGYMQG-------LQILRDARGWDRPSDHVP 260

Query: 298 ISIDYD 303
           +   +D
Sbjct: 261 VIATFD 266


>gi|283781932|ref|YP_003372687.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
 gi|283440385|gb|ADB18827.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
          Length = 290

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 78/308 (25%), Gaps = 42/308 (13%)

Query: 2   IRKYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
            R+++   +   +   A            + +R++++N+   +                 
Sbjct: 7   RRRFLKTTLAGTLATAAFTGTSIAGAEDKKTLRVIAYNVYECTGWPKERALGKKATALGQ 66

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDI 110
                       + DI+   E      V ++       +  F S  +             
Sbjct: 67  MPVRFAHELALYEPDIINFSESPKEPIVKQIAELLGMNYTYFPSGVKWPG---------- 116

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
               A+  +      Q+ PL+  +           V  L       + +   HL      
Sbjct: 117 ----AILSRFKITGSQNCPLVQGERPADLFTRHWGVATLQIAADHDLVIHSAHLHPDMEP 172

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                      +   Q+   + + + +   +    ++ GD N   +              
Sbjct: 173 -----------ATRLQEIPRMLESMEKDLSAGRSMLLMGDLNHTPDTKEYELW-----KK 216

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE-SFSEILYNEDDIKSRG 289
                 F +         K+      IDY +      K +       E  +  ++  +  
Sbjct: 217 AGWQDTFTQAGAGEGLTIKSDTPDRRIDYILAAGPIAKTIKSSRPLFEGAFRVNNADAES 276

Query: 290 KRLSDHCP 297
             LSDH P
Sbjct: 277 FALSDHLP 284


>gi|238059546|ref|ZP_04604255.1| hypothetical protein MCAG_00512 [Micromonospora sp. ATCC 39149]
 gi|237881357|gb|EEP70185.1| hypothetical protein MCAG_00512 [Micromonospora sp. ATCC 39149]
          Length = 338

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 78/300 (26%), Gaps = 48/300 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWK----------------NSVKRTTSDYTLLRQYAKN 63
               +R+V++NI            +                +  +       LL +   +
Sbjct: 57  AGMPLRVVTFNIWGTGTPHRYWHDRAVLRGARAGSPALGEADERRVWRRRAALLTRALAD 116

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            DAD+V LQE+ +  A              +      +    S       +AV  +    
Sbjct: 117 ADADLVALQEVPARAA-----AGAGRARELADGLRGRYDVAHSGPGPTPGLAVLSRAPIR 171

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            ++++P+ G                ++E++   + V   HL                  L
Sbjct: 172 ARRAFPVPGFGGFGGHP-------TVLEVSTCAVTVWVAHLPVGP-------DEVKEACL 217

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
              +A  +            P ++ GD N   +         + +  +            
Sbjct: 218 RGLEAAAVA------APRERPLLVCGDLNCPADGPLMGRLRDRGVLVDA---WASAGGSP 268

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        +D+ +                    +D     G+  SDH  +++  D
Sbjct: 269 AALTMPVPVPTWRLDHVLYRAGDPVRAATRPALLGTACDDS----GQYPSDHFGVALTLD 324


>gi|169823955|ref|YP_001691566.1| exodeoxyribonuclease III [Finegoldia magna ATCC 29328]
 gi|167830760|dbj|BAG07676.1| exodeoxyribonuclease III [Finegoldia magna ATCC 29328]
          Length = 253

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 83/306 (27%), Gaps = 78/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++L+SWN+N                              +L+ADI  LQE+    N +  
Sbjct: 1   MKLISWNVNGYRAVMKKGFM---------------DAFNSLNADIFCLQEIKMKENQMTD 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  +             +N   ++   V  K   +       +   D+  R   
Sbjct: 46  EMNIEGYHRY----------SYSANKAGYSGTLVYTKVEPIGVSYGIGIDEHDTEGR--- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++    +  ++++++  +        +               L+D         
Sbjct: 93  ------VITCEYEDFFLVNVYTPNSKQKLERLDYRMVWEDEFHNYLNILRDR-------- 138

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N   N                     +    +  +  +  F      + + 
Sbjct: 139 KPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERNKMSLLLNDGYIDTFRYFYPDKTDE 198

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDYF++  +    L+     + +             SDHCP+
Sbjct: 199 YSYWSYFAKARERNAGWRIDYFLVSDDLKDNLVDAKIHQSI-----------MGSDHCPV 247

Query: 299 SIDYDF 304
            ++ +F
Sbjct: 248 ELEINF 253


>gi|150007753|ref|YP_001302496.1| exodeoxyribonuclease [Parabacteroides distasonis ATCC 8503]
 gi|256840019|ref|ZP_05545528.1| exodeoxyribonuclease III [Parabacteroides sp. D13]
 gi|149936177|gb|ABR42874.1| exodeoxyribonuclease [Parabacteroides distasonis ATCC 8503]
 gi|256738949|gb|EEU52274.1| exodeoxyribonuclease III [Parabacteroides sp. D13]
          Length = 284

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 87/307 (28%), Gaps = 77/307 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79
           +K++++++N N L    G  L                ++      D++ +QE  +     
Sbjct: 30  EKLKIITYNTNGLRAAVGKGLP---------------EWLAQEQPDVLCIQETKLQPDQF 74

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            ++ F    +  +  + +   +          + +A+  K        +   G       
Sbjct: 75  PSETFETLGYKSYLFSAQKKGY----------SGVAILTKQEP----DHIEYGMGIEKYD 120

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      +  +   + ++ ++  S    D  ++             +  + ++ + +
Sbjct: 121 NEGRF-----LRADFGDVSIVSVYHPSGTSGDERQD-------FKMIWLEDFQKYVVELQ 168

Query: 200 ESLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +S    ++ GD+N                         +   + +    +        D 
Sbjct: 169 KSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMTRFLSAGFTDTFRFLNPDK 228

Query: 244 RCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +     + R           IDY ++  N    +          +           SDHC
Sbjct: 229 QEYTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVKAAYILNDAVH-----------SDHC 277

Query: 297 PISIDYD 303
           P  ++ +
Sbjct: 278 PAVLEIE 284


>gi|16802368|ref|NP_463853.1| hypothetical protein lmo0323 [Listeria monocytogenes EGD-e]
 gi|224502384|ref|ZP_03670691.1| hypothetical protein LmonFR_07664 [Listeria monocytogenes FSL
           R2-561]
 gi|16409687|emb|CAD00850.1| lmo0323 [Listeria monocytogenes EGD-e]
          Length = 256

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 77/285 (27%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +  +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++      +         P + +  S +    R
Sbjct: 54  KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     + +GK+ ++ + HL                       A  L           
Sbjct: 113 ICVWGKFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAEN 159

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259
            P +I GDFN + +    N    K  D      +  K      +  + LR       IDY
Sbjct: 160 SPVIILGDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPLRPINELEKIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             + +          F    Y     +  G   SDH P++ + D+
Sbjct: 220 IFVSEE---------FQVCTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|268316715|ref|YP_003290434.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM
           4252]
 gi|262334249|gb|ACY48046.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM
           4252]
          Length = 370

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 87/312 (27%), Gaps = 64/312 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  A     + ++++N+                 R  +    L+         ++  QE+
Sbjct: 82  PSGAEADDTLVVMTYNV--------------PESRRPALGDSLQALVLRYRPQLIGFQEV 127

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-----IAVRKKNVRVLQQSYP 129
           G +    +  P     I +    +     R S  D         +    +   V Q+   
Sbjct: 128 GVWRYEQRGRPSTVRLIGHLRPLVERQGFRFSVPDPTRGPMFAEVVTLTRLPVVRQEIRL 187

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------------- 174
           L    +       R      +   G+     ++ L+S+  +   E               
Sbjct: 188 LERGPEGLIYQAVRS----ELCWAGRLFVHYNVRLQSYGPVKPWEVLRDGGWKRPANWRR 243

Query: 175 --NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
               Y  +    + Q + L+ WI Q     +P +++GDFN   +       F+  +    
Sbjct: 244 WLGAYRRAMLQRAAQVRQLRAWIDQ---EELPVILSGDFNSTPD-----QWFYGWLSRGL 295

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                     +        R  + ID+ ++ +               +           L
Sbjct: 296 QAAGRLGGIAAPSWPA--GRPLVRIDHVLVSRE--------------WEVLGGAVPAAGL 339

Query: 293 SDHCPISIDYDF 304
           SDH P+     +
Sbjct: 340 SDHRPVIARLRW 351


>gi|157377076|ref|YP_001475676.1| endonuclease/exonuclease/phosphatase [Shewanella sediminis HAW-EB3]
 gi|157319450|gb|ABV38548.1| endonuclease/exonuclease/phosphatase [Shewanella sediminis HAW-EB3]
          Length = 892

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/384 (10%), Positives = 94/384 (24%), Gaps = 101/384 (26%)

Query: 22  QKVRLVSWNINTLSEQEGV---------------------SLWKNSVKRTTSDYTLLRQY 60
             +R+ S+N+  L   +                           +S++      T +   
Sbjct: 467 GDIRVASFNVLNLFTSDSDIGGSLNPMCKDQADANASKGCGRGAHSLEDYQLQRTKIVNA 526

Query: 61  AKNLDADIVFLQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
              ++AD++ L E+ +             N++    P+     F        +       
Sbjct: 527 ITAMNADVIGLMEIENNGFGEHSSIQYLLNSLNAELPQEDAYAFIEPAPADKYQGEFIGT 586

Query: 109 D-IHTAIAVRKKNVRVLQQSYPLLGAKD------------------SFSRAGNRRAVELL 149
           D I   I  R   V+    +  +   +                          R ++   
Sbjct: 587 DAITVGILYRPAKVQPAVDALVIATPEQHAEAGVATRGEGAKVETSPSYDKYQRHSLAQT 646

Query: 150 VEINGKKIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQK 198
             I+G+ + V+  HLKS                   +            A+ L + +   
Sbjct: 647 FMIHGEPLTVVVNHLKSKGSGCLEDWMEFSENKDPADLQGKCNEFRVSAAKVLGESLEDV 706

Query: 199 KE------------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DS 233
           +                P  +  D++   +        W +++                 
Sbjct: 707 EGGLLVIGDMNAYGQEDPIAVLTDYDASTSNRDLVTASWTSLNGEVYEQTGSVIDKGYGL 766

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL- 292
           +        +             +D+ + ++     L+      I   E ++     +  
Sbjct: 767 INLSTLSHGTATFGYSYSGELGNLDHALANEVVADKLVAIEDWNINSLESNLFEYSSKYT 826

Query: 293 ------------SDHCPISIDYDF 304
                       SDH P+ I   +
Sbjct: 827 GDLAKSENVFSSSDHDPVIIALTY 850


>gi|90422719|ref|YP_531089.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18]
 gi|90104733|gb|ABD86770.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18]
          Length = 256

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 77/302 (25%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                     L  + K    D+V LQE+   +A    
Sbjct: 1   MKVATFNINNVN----------------RRLENLLHWLKQARPDVVCLQELKCRDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +A+  +    +     L G +   S   +R
Sbjct: 41  ------EFPARAIARAGYQAVWQGENTWNGVAILSRGGAPIVTQTRLPGDR---SDLQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     I V  ++L +       +  Y  +        + L     +     V
Sbjct: 92  Y-----IEAAIDGIVVGCLYLPNGNPQPGPKFDYKLA------WFKRLAGHARKLLRQDV 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN     L                     +  +          +    R    
Sbjct: 141 PVVLAGDFNVAPTALDIYPTRSWDHDALVQPASRAAFARLVKQGWTDALRELHPDRRIYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+ ++       L Q          D         SDH P  I
Sbjct: 201 FWHYMRQRYERDAGLRLDHLLLSPQLAPRLRQAGV-------DRAVRGRPGASDHAPTWI 253

Query: 301 DY 302
             
Sbjct: 254 VL 255


>gi|294806497|ref|ZP_06765338.1| exodeoxyribonuclease III [Bacteroides xylanisolvens SD CC 1b]
 gi|294446360|gb|EFG14986.1| exodeoxyribonuclease III [Bacteroides xylanisolvens SD CC 1b]
          Length = 253

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L       L                ++    + DI+ LQE          
Sbjct: 1   MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +                +    ++ +A+  K        +   G          R
Sbjct: 38  LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKREP----DHVEYGMGMEAYDNEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D  +       +      +  + ++ + ++S  
Sbjct: 94  F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVMELQKSRP 141

Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD+N                         +   + +             + +   
Sbjct: 142 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDSFRTLCPEKQEYT 201

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R           IDY ++ +     L +        +           SDHCP+++
Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 250

Query: 301 DY 302
           + 
Sbjct: 251 EI 252


>gi|27366657|ref|NP_762184.1| hypothetical protein VV2_0202 [Vibrio vulnificus CMCP6]
 gi|27358223|gb|AAO07174.1| hypothetical protein VV2_0202 [Vibrio vulnificus CMCP6]
          Length = 322

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 101/318 (31%), Gaps = 39/318 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + + S N+       G     +   +        T L Q  + ++AD+V  QE+ S +A+
Sbjct: 2   ITIASCNLFNFLAPPGAYYEFSNILTDNEWNKKTTWLTQQLRAMNADVVAFQEVFSPDAL 61

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-------GA 133
             +     +  ++      + +     +    AIA R   +      +            
Sbjct: 62  NTLTSDLGYP-YFVCLDKPHVTDEFIYSKPVLAIASRWPVIESRLVRFKDCFGDYSENSD 120

Query: 134 KDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSL--------- 183
             + ++  +R  +  ++E+    +  V+ +HLKS             + +          
Sbjct: 121 SVTDNKEFSRLPLHAVIELPIIGLCDVITLHLKSQRPTRWQTQQIDQADNTPPSDPVGSW 180

Query: 184 -----LSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-----ND 232
                   +A  L  +I +       P VI GDFN  IN         ++  P      D
Sbjct: 181 LSTVQRGWEAVLLSQYIKKIYASHARPMVIMGDFNANINSTELKPFVDESNTPLLKDVRD 240

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDD------I 285
            L   P   D    A     ++  I DY ++ +   +   Q+          D       
Sbjct: 241 WLREQPIFTDEAQKATHYHGSQGLILDYLLLSEEFAQQNAQQRGKITHLVVWDKHLVNPS 300

Query: 286 KSRGKRLSDHCPISIDYD 303
               +  SDH  +++  D
Sbjct: 301 FEVDQFASDHAFVAVTID 318


>gi|332520994|ref|ZP_08397454.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4]
 gi|332043524|gb|EGI79720.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4]
          Length = 339

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 82/291 (28%), Gaps = 57/291 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + ++++N+   +  + +                L ++ K    DI+ LQE      V 
Sbjct: 98  DNLSIMNFNVRLFNLYKWIPEDNIEN--------KLVEFVKEESPDILALQEYHPRETVD 149

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F K  +                S   +    A+  K   V   S       ++     
Sbjct: 150 FSFYKYKYEKL-------------SGKKVKLGQAIFSKYPIVNSGSIAFPNTANN----- 191

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC--------SLLSQQAQWLKD 193
              A+   V      + V +IHL+S      +E   +                Q    + 
Sbjct: 192 ---AIFADVVKGNDTVRVYNIHLQSLRIDTRVEQLTTQDSEKLFDGVGQTFKMQQFQTEL 248

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           ++  K++     +++GDFN         +         D +  F    +           
Sbjct: 249 FLLHKRQCKYKMIVSGDFNNTALSYVYKEI------KGDLVDTFKAAGNGFGRTYNFKFF 302

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            + ID+ +   +              +  +  K+     SDH PI     F
Sbjct: 303 PMRIDFILTHPD--------------FKINSFKTYDVEFSDHYPIMTKVSF 339


>gi|300939825|ref|ZP_07154463.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 21-1]
 gi|300455357|gb|EFK18850.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 21-1]
          Length = 253

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   +++ ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRSVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +        ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGELVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|319408771|emb|CBI82428.1| exodeoxyribonuclease III [Bartonella schoenbuchensis R1]
          Length = 263

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNI                    + +  L ++ +    DIV LQE+   +A    
Sbjct: 1   MKIATWNIAG----------------IKARHDTLCKWLQKNQPDIVCLQEIKCIDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  K               D  +R    
Sbjct: 41  ------NFPRDEIETLGYHIETHGQKSFNGVALLSKKRPDELIRQLPGDDNDEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E +   N   + V  ++L +   ++S ++ Y        +  + L            
Sbjct: 92  --IEAVYSTNKGVVRVASLYLPNGNPINSEKHLYK------MRWMERLYTHAKSLLAYED 143

Query: 204 PFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----------ANKN 250
           P ++AGD+N      +     +     +    +   F +                 +   
Sbjct: 144 PLILAGDYNVIPTPLDAKKPEEWKNDALFLPQTRQAFQRIIYLGFYDSIRNVTDDSSFSF 203

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           ID+ ++   A   L+                  ++ SDH P+ I+
Sbjct: 204 WDFQAGAWRKNNGIRIDHLLLSPEAADQLV-------CAYSQTEVRGYEKPSDHVPVWIE 256

Query: 302 YD 303
            +
Sbjct: 257 LN 258


>gi|332561082|ref|ZP_08415400.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N]
 gi|332274880|gb|EGJ20196.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N]
          Length = 255

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 81/303 (26%), Gaps = 71/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N ++                    +L ++ +    D+V LQE          
Sbjct: 1   MRIATFNVNGVNG----------------RLPVLLRWLEEARPDVVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +     +      +            +A+  +    +Q    L G +D      +R
Sbjct: 35  LKAASARFPAAALEAAGYGAVWHGQKSWNGVAILARGAEPVQTRQDLPGVQDG----ESR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + + V  ++L +       +     +          L +   +     V
Sbjct: 91  YIEAAV-----EGVLVGCLYLPNGNPAPGPKFAAKLA------WFDHLLNHAEEVLRHDV 139

Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P V+AGDFN     L            +   +                 +          
Sbjct: 140 PVVLAGDFNVMPTDLDVHRPERWREDALFRPEARAAFARLLAQGWTDSIRHLYPEDRIYT 199

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + +D+ ++  +    L            D      ++ SDH P+ I
Sbjct: 200 FWDYLRNAWERDAGLRLDHLLLSPSLLTRLKGAGV-------DRHVRGWEKASDHAPVWI 252

Query: 301 DYD 303
           + D
Sbjct: 253 EID 255


>gi|312881161|ref|ZP_07740959.1| sphingomyelinase/beta-hemolysin [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309371053|gb|EFP98507.1| sphingomyelinase/beta-hemolysin [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 489

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/326 (10%), Positives = 92/326 (28%), Gaps = 35/326 (10%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M    +  L    +   A    +V +   +++N+  L          N  ++       L
Sbjct: 1   MKSNALFFLGVIFLSVNAPANAEVAVPKTMNYNVYMLENT------INPGRKQLQRAQNL 54

Query: 58  RQYAKNLDADIVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                    ++V   E+          + + + FP  T  +        +          
Sbjct: 55  VNSNLFDSMEVVVFNEIFDNASSNVLLDGLKEEFPYQTPVLGREKSGWDDTQGWMGYKPE 114

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              +A+  ++    Q    +            +  +  ++E + ++   +  H+++    
Sbjct: 115 DGGVALVSRHPIKSQTQV-IYQQACGADWLSQKGFIHAVIEKSNQRFHFIATHVQA---- 169

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                      ++   Q + ++D+I Q    +    +I GD N                 
Sbjct: 170 -EDNACKGDDVAIRKSQFETIRDYINQKDIPNDEMIIILGDLNVMKASPEYRSMLETLNV 228

Query: 230 PNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQES-FSEILYNED 283
                                +AN        +DY  ++++  +     +   +++    
Sbjct: 229 NEPDSYAGADYSWDPSSNALVHANYPDLKGQLLDYIFVEKDHKQPRYWHNQVWDVVSPRL 288

Query: 284 DIK-----SRGKRLSDHCPISIDYDF 304
           +I            SDH P+   ++F
Sbjct: 289 EIFGTFESYYMYEYSDHYPVVA-FEF 313


>gi|290963099|ref|YP_003494281.1| hypothetical protein SCAB_88221 [Streptomyces scabiei 87.22]
 gi|260652625|emb|CBG75758.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 332

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 90/338 (26%), Gaps = 65/338 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78
           ++R+ ++N+    E                   L++     L ADI   QE+        
Sbjct: 3   QIRIATFNLENFDEP-----APEDPPSLADRIALMKPQITRLRADIACFQEVHGQERPGQ 57

Query: 79  -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                A+ ++           T             +    + +      +  Q       
Sbjct: 58  PRDLLALKELLAGTNLDGASLTSTKPADDAVFDLRN----LVIATHLPVIKHQQLKNDLV 113

Query: 134 KDSFSRAGN--------------RRAVELLVEI----NGKKIWVLDIHLKSFCFL----- 170
           K+   +                 R  +   +++     G+ + ++ +HLKS         
Sbjct: 114 KEPRYQRLTANPADAAPVTIGIERPILHAQIDVDHGAPGRLLHIITVHLKSKLPSNIPGQ 173

Query: 171 ------------DSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKIN 216
                       D        S      QA  ++  + Q    +     V+AGDFN +  
Sbjct: 174 LGGKHGDVWLSADGWAEGSFLSSMKRMSQALEVRRLVDQILHDDPDARIVVAGDFNAEPE 233

Query: 217 YLGN-------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
            +          D     +     +       +       +      ID+ ++ +N    
Sbjct: 234 EVPVLAICGNVEDTNNGELATRVLVPIEHTIPNEARYTLFHHGRGQMIDHMLVTRNLLAH 293

Query: 270 LIQESFSEILYNEDDIK---SRGKRLSDHCPISIDYDF 304
                    + ++D I          SDH P+   +DF
Sbjct: 294 YRGSEIHNEILHDDSIAFATDVKYPESDHAPVVATFDF 331


>gi|229141809|ref|ZP_04270337.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
 gi|228641645|gb|EEK97948.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
          Length = 352

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 105/324 (32%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKEQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSL--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +     +   I   NGK + ++++HL +        
Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDQAIVEHTIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|303287500|ref|XP_003063039.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455675|gb|EEH52978.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 323

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 83/319 (26%), Gaps = 38/319 (11%)

Query: 20  VAQKVRLVSWNINTL---SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
               + ++ +N+          G +          +    L       DAD+V LQE+  
Sbjct: 4   STDTLSVIQYNVLADALSGPDAGFTSMPPCDLAFGARRAKLLGKIIAEDADVVCLQEVDH 63

Query: 77  -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            ++A         +   Y  +   +  ++ S   +   +A+  K  ++      L G   
Sbjct: 64  YHDAFKPAMDAAGYDGIYREDEW-SPCRKLSGGMLRDGVAIFYKREKLQLCGMDLPGVPR 122

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-------------------- 175
                 + +++       GK I      L                               
Sbjct: 123 RSKDVDDDKSLLGKCIDAGKCIVARFRVLPPREETHGPRWEEYQNSTLEVVVATVHLDSK 182

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLV-----PFVIAGDFNRKINYLGNNDD------- 223
                      QA  +   + + + +       P ++AGDFN   +    +         
Sbjct: 183 KDEEGAKKRRNQAFHMMQAVEKMRSNSPTNFFLPVIVAGDFNAVPSEPAVDRVRNGVAGG 242

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                +  + +         R    K    K+ IDY  + +      +     +      
Sbjct: 243 LRSAYEEINGIHPAFTTWKIRSGNYKKGEAKMCIDYIFVPRECGILSVGA-LPDENDIGP 301

Query: 284 DIKSRGKRLSDHCPISIDY 302
                 K  SDH  +  D 
Sbjct: 302 KGLPCEKHPSDHLMLRADL 320


>gi|47222275|emb|CAG11154.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 360

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 88/294 (29%), Gaps = 45/294 (15%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +    +K+ L++WN++ L                      L  +      D+VFLQE+ 
Sbjct: 104 PSEDDDRKLSLITWNVDGLDTDN-----------LAERARGLCSFIVLYTPDVVFLQEL- 151

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                        +  +     +        +    T + ++K  V++L+          
Sbjct: 152 ----------IPPYVQYLKKRAVSYLIIEGGDEGYFTGMMLKKTRVKLLESEVVAYPTT- 200

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R  +   V+  G+K+ V+  HL+S                   +Q + +   +
Sbjct: 201 ----QMMRNLLVAQVDFRGQKLCVMTSHLESCKGH----------AEERMKQLRLVMQRM 246

Query: 196 TQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                  V  +  GD N +           +  D W+ +   +   R+  +  +  N + 
Sbjct: 247 RD-APEDVTVLFGGDTNLRDTEVTKVGLPPSVCDVWERLGKQE-HCRYTWDTKANSNKSV 304

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++   D   +       +   +   +     +    G+  SDH  I   + 
Sbjct: 305 PFVSRCRFDRIYLRPATEGGVPCVAPDHMALVGLEKLDCGRYTSDHWGIYCSFS 358


>gi|296114978|ref|ZP_06833622.1| putative exodeoxyribonuclease III [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978440|gb|EFG85174.1| putative exodeoxyribonuclease III [Gluconacetobacter hansenii ATCC
           23769]
          Length = 260

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/302 (8%), Positives = 70/302 (23%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++  +WN+N                     +  + Q+ +    D++ LQE+         
Sbjct: 1   MKFATWNVN----------------SIRQRHDHVLQWLEREQPDLIGLQEIKCIED---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +         +  +A+  +    +                   
Sbjct: 41  ------QFPADAFRKAGYESVVVGQKSYNGVAILSRVPFTVTHR------ALPGWECEPP 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           +A  + +    + +   +++L +             +          L         +  
Sbjct: 89  QARYVEIRT--EALTFGNLYLPNGNSGGKAGYDNKLAF------MAALAQHARDLLHAGT 140

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            FV+ GD+N                       +   ++T+                    
Sbjct: 141 DFVLTGDYNVCPTDEDLAPGALPPDDALVRPASRAAFRTLLWLGLTDALRALHPVGRFYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+ ++     + L+           D  +    + SDH P+ +
Sbjct: 201 FWDYQAGAWQRDSGLRIDHALLSPRVAERLLSAI-------PDREERNMTQPSDHVPLIV 253

Query: 301 DY 302
             
Sbjct: 254 TL 255


>gi|224137778|ref|XP_002322649.1| predicted protein [Populus trichocarpa]
 gi|222867279|gb|EEF04410.1| predicted protein [Populus trichocarpa]
          Length = 428

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 88/313 (28%), Gaps = 69/313 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   +    V+L+SWN+N L        +               + A+  + D++ LQE 
Sbjct: 158 PAPLTDGNSVKLMSWNVNGLRALLKFEGFSA------------LELAQRENFDVLCLQET 205

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                +      ++           +     +    ++  A+  +   +       +   
Sbjct: 206 K----LQASKDVDSIKQCLIDGYENSFWTCSNAKLGYSGTAIVSRIKPLSVCYGLGIPDH 261

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ-WLKD 193
           DS  R         +V       ++++ ++ +               S    Q    L +
Sbjct: 262 DSEGR---------VVTAEFDSFYLVNTYVPN-------SGDGLKRLSYRITQWDPSLSN 305

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238
           ++ + ++S  P ++ GD N     +   +                          L+   
Sbjct: 306 YMKELEKSK-PVILTGDLNCAHQEIDIFNPAGNKRSAGFTEEERQSFGSNFLSKGLVDTF 364

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +++            +           +DYF++ ++    +            D      
Sbjct: 365 RKQHPNVVGYTYWGYRHGGRKTNKGWRLDYFLVSESIADKVH-----------DSYIVPD 413

Query: 290 KRLSDHCPISIDY 302
              SDHCPI +  
Sbjct: 414 VNGSDHCPIGLVL 426


>gi|160889848|ref|ZP_02070851.1| hypothetical protein BACUNI_02279 [Bacteroides uniformis ATCC 8492]
 gi|270294104|ref|ZP_06200306.1| exodeoxyribonuclease III [Bacteroides sp. D20]
 gi|317478856|ref|ZP_07938007.1| exodeoxyribonuclease III [Bacteroides sp. 4_1_36]
 gi|156860840|gb|EDO54271.1| hypothetical protein BACUNI_02279 [Bacteroides uniformis ATCC 8492]
 gi|270275571|gb|EFA21431.1| exodeoxyribonuclease III [Bacteroides sp. D20]
 gi|316905032|gb|EFV26835.1| exodeoxyribonuclease III [Bacteroides sp. 4_1_36]
          Length = 254

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 82/303 (27%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L                        ++      D++ LQE          
Sbjct: 1   MKIITYNVNGLRAAVTKGFP---------------EWLAQEQPDVLCLQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +           H    +    ++ +A+  K        +   G          R
Sbjct: 38  LQPEQYPAEALDALGYKHYLYSAQKKGYSGVAILSKQEP----DHVEYGMGIEEYDNEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D  +       +      +  ++++ + + +  
Sbjct: 94  F-----IRADFGDVSVVSVYHPSGTSGDERQ-------AFKMVWLEKFQEYVLELERTRP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  +D                W T   N   I   +          
Sbjct: 142 KLILCGDYNICHEAIDIHDPIRNATNSGFLPEEREWMTRFLNAGFIDSFRWLHPDKQEYT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++ +     L +      + +           SDHCP+ +
Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVSEPVRPMLKEARILGDVVH-----------SDHCPMLL 250

Query: 301 DYD 303
           +  
Sbjct: 251 EIT 253


>gi|77465425|ref|YP_354928.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
 gi|77389843|gb|ABA81027.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
          Length = 255

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 80/303 (26%), Gaps = 71/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N ++                    +L ++ +    D+V LQE          
Sbjct: 1   MRIATFNVNGVNG----------------RLPVLLRWLEEARPDVVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +     +      +            +A+  +    +Q    L G +D      +R
Sbjct: 35  LKAASARFPAAALEAAGYGAVWHGQKSWNGVAILARGAEPVQTRQDLPGVQDG----ESR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + + V  ++L +       +     +          L +   +     V
Sbjct: 91  YIEAAV-----EGVLVGCLYLPNGNPAPGPKFAAKLA------WFDHLLNHAEEVLRHDV 139

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN     L  +                  +  +                    
Sbjct: 140 PVVLAGDFNVMPTDLDVHRPERWREDALCRPEVRAAFARLLAQGWTDSIRHLYPEDRIYT 199

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+ ++  +    L            D      ++ SDH P+ I
Sbjct: 200 FWDYLRNAWERDAGLRLDHLLLSPSLLTRLKGAGV-------DRHVRGWEKASDHAPVWI 252

Query: 301 DYD 303
             D
Sbjct: 253 AID 255


>gi|296123488|ref|YP_003631266.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
 gi|296015828|gb|ADG69067.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
          Length = 253

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 79/283 (27%), Gaps = 53/283 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+NI+               +        + +  + L+ D++ LQE+  + A ++ 
Sbjct: 1   MRIVSFNIH----------KGIGGRDRRYRLERIIEALRALEPDVICLQEVDHHVARSRY 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +             ++       +      +  +       +  L            R
Sbjct: 51  DHQAKLISEALGLVHAHYQLNVRLKEGGYGNLIASRYPLASVHAISLT-----RRHYKPR 105

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  ++V+    ++ ++  HL                 +    Q + + +    ++   +
Sbjct: 106 GAQLVVVQTPLGRLHLIHWHLGLR-------------ETERHWQVRRMFEHQHFREHRQL 152

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE----KDSRCNANKNLRNKIPIDY 259
           P +  GD N            W+    N        +      SR  +         +D 
Sbjct: 153 PAIAIGDTND-----------WRNTLANGPFAVHGWKQISSPPSRFRSFPAWLPLGALDK 201

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ++              I           +  SDH P+ +D 
Sbjct: 202 VFVNSGVA----------IESCHIAKSRLLRDASDHLPLVVDL 234


>gi|294785528|ref|ZP_06750816.1| endonuclease/Exonuclease/phosphatase family protein [Fusobacterium
           sp. 3_1_27]
 gi|294487242|gb|EFG34604.1| endonuclease/Exonuclease/phosphatase family protein [Fusobacterium
           sp. 3_1_27]
          Length = 279

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 96/307 (31%), Gaps = 38/307 (12%)

Query: 1   MIR-KYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M + K +L+++F L    +  S A +  + S+NI  L                  D    
Sbjct: 1   MKKGKLLLSIIFALFFSLSVLSSADEAYIASFNILRLGA-------------AKKDIPQT 47

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAV 116
            +  +    DIV L E+ + + V ++  +         +  I+     S+    + A   
Sbjct: 48  AKILQGF--DIVGLVEVINRDGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYVY 105

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +K  V+ ++        K S      R       +I       + +H             
Sbjct: 106 KKDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------N 153

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                   + +   + D+   K +      IAGDFN       +    +K  D     I 
Sbjct: 154 NEAQRKAENFKMVDVYDYFQDKDKKENDIFIAGDFNL-YALDESFRPLYKHADKITYAID 212

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              +         N       D F   Q   +     S   + ++ D+ K   + +SDH 
Sbjct: 213 PAIKTTIGTKGRANSY-----DNFFFSQKYTQEFTGSS-GALDFSGDNPKLMREIISDHI 266

Query: 297 PISIDYD 303
           P+ I  +
Sbjct: 267 PVFIVVE 273


>gi|58040696|ref|YP_192660.1| exodeoxyribonuclease III [Gluconobacter oxydans 621H]
 gi|58003110|gb|AAW62004.1| Exodeoxyribonuclease III [Gluconobacter oxydans 621H]
          Length = 282

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 78/305 (25%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL++WNIN+L                     LL+Q  +  + DIV LQE    + +   
Sbjct: 18  MRLITWNINSL----------------RLRLPLLKQIVEQENPDIVCLQETKVPDPL--- 58

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +   +    +       +  +A+  ++        P    +         
Sbjct: 59  ------FPAQALAEMGLPHQIYKGMKGYNGVAILSRHELQSVDGTPDWCTRSDCRH---- 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V   +      I + D ++ +    D  +   +   +           W T    +  
Sbjct: 109 --VAASIATPAGPILLHDFYVPAG--GDIPDPEENEKFAHKLAFVDEATSWFTSTPPARS 164

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                  ++     +  K                      
Sbjct: 165 --ILVGDLNIAPLEHDVWSHKQLLKIVSHTPPEIERLKAWMATGFQDAMRTITPEPEKLY 222

Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+  M  +    L      + +             SDH P+
Sbjct: 223 TWWSYRNRDWKKSNRGRRLDHVWMTPDLMPGLRNVRVLQEV-------RDWGSPSDHVPV 275

Query: 299 SIDYD 303
            +D+D
Sbjct: 276 VLDFD 280


>gi|312131268|ref|YP_003998608.1| exodeoxyribonuclease iii xth [Leadbetterella byssophila DSM 17132]
 gi|311907814|gb|ADQ18255.1| exodeoxyribonuclease III Xth [Leadbetterella byssophila DSM 17132]
          Length = 254

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 80/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +++ ++N+N +                      L ++    + DI+ LQE+       V 
Sbjct: 1   MKITTFNVNGIRSAINKG---------------LLEWLSKENPDILCLQEIKLSETELVE 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F    +  ++       +          + +A+  K       +  + G +     + 
Sbjct: 46  SLFTDLGYHCYWYPAIKKGY----------SGVAILSKIP----ANQIVKGIEHELYDSE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +            ++  +  S    D  +             A+ L       K +
Sbjct: 92  GRIILA-----QFADFQLVSAYFPSGTTGDVRQEIKYKFLDDFLIYAEKL-------KAT 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNA 247
             P +I GD N     +  ++                          +   + K    + 
Sbjct: 140 GTPLLICGDVNICHKEIDIHNPKSNAKTSGFLPEERAWVDRFCECGFVDTFRHKVKDPHH 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY        + +                     +SDHCP+
Sbjct: 200 YTWWSYRAGARGKNLGWRIDYIFAANMLPESIQNVHIH-----------SDVMMSDHCPV 248

Query: 299 SIDY 302
           S+++
Sbjct: 249 SLEF 252


>gi|167898570|ref|ZP_02485971.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 7894]
          Length = 299

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 75/286 (26%), Gaps = 56/286 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
                +++R+ ++NI+                 T S    +      L AD++ LQE+  
Sbjct: 7   AQPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPL 55

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A           +   T                   AV  +      +   L     S
Sbjct: 56  GGARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----S 107

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F     R A++  +E     + V+  HL               S +  + Q   L   + 
Sbjct: 108 FGNREPRGALDADIECGFGVLRVVATHLGL-------------SATERNAQVARL---LA 151

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N         + F +       +  F +    R            
Sbjct: 152 AFDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS-- 200

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +     ++L+  +                   DH P+    
Sbjct: 201 LDRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 236


>gi|114564406|ref|YP_751920.1| endonuclease/exonuclease/phosphatase [Shewanella frigidimarina
           NCIMB 400]
 gi|114335699|gb|ABI73081.1| Endonuclease/exonuclease/phosphatase [Shewanella frigidimarina
           NCIMB 400]
          Length = 377

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/369 (13%), Positives = 104/369 (28%), Gaps = 81/369 (21%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVF 70
           V    S      +VS N+    E            S K+       L ++  +   DI+ 
Sbjct: 6   VSTAPSPELTFSVVSINLFNFIEPPHAYYDFENIYSDKQWQKKCAWLSEFISHNQPDIIA 65

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RVLQQS 127
            QE+ S +A+A++     +  ++    L              AIA +   +    V    
Sbjct: 66  FQEVFSPDALARLTESLGYK-YFVALDLPEVVSDYVYRSPVVAIASKYPIIDSANVSPDP 124

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLEN---------TY 177
             +     + S + +R+ +   +++          IHLKS     S ++           
Sbjct: 125 QWINQLGLAESFSFSRKPLRATIQLPVFGPCDCYVIHLKSKRSGVSRDDISESGLHGGAD 184

Query: 178 SPSCSLLSQQAQWL----------KDWITQKKESLVPFVIAGDFNRKINY---------- 217
             +  +L + A  L             + +++++  PF++ GDFN  +            
Sbjct: 185 FVARQVLGRWASSLQRGSESALLCHQMLMRRQQTQQPFMLMGDFNDTMGSELLAAFNNQL 244

Query: 218 ----LGNNDDFWKTIDP----------------------------------NDSLIRFPK 239
                   D     +                                      S +   +
Sbjct: 245 RVYRSDIEDPGLAKLGETSLMAELQQSSLFDSYELFIDATKCNATLAQDEFESSALVDEQ 304

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLS 293
              +R   +    +   +DY ++         Q     I Y   D         R    +
Sbjct: 305 PHPARQPTHYYGNSGSVLDYILVSSEFNPTQQQNLAHIIDYKTFDRHLVRPDYERDSDST 364

Query: 294 DHCPISIDY 302
           DH P+ + +
Sbjct: 365 DHAPVMMSF 373


>gi|325294131|ref|YP_004279995.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3]
 gi|325061984|gb|ADY65675.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3]
          Length = 267

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 77/308 (25%), Gaps = 68/308 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              + +WNIN                       ++ Q+      DI+ LQE    N    
Sbjct: 2   SFSITTWNIN----------------SVRLRMPIVEQFLVRYKPDILCLQETKCPNGEFP 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P       +                 +  +A+  K            G  D+      
Sbjct: 46  MKPLKALGYEHVIIH---------GQKGYHGVAIASKIPLTEDHRQDYCGIGDARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +  + ++  ++I + + ++ +    D  + + +P         + +K  +       
Sbjct: 93  ---ISAIFQVGSRRIRLHNFYVPAG--GDEPDRSINPKFGHKLDFIEEMKA-LRADGVPG 146

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GD N                   +     D     +   + L            
Sbjct: 147 TSSILVGDLNIAPLENDVWSHKQLLKIVSHTPVETDGMLDIMKKGNWLDLMRLNVPDSEK 206

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+    Q+    L +        +         R SDH 
Sbjct: 207 IYTWWSYRAKDWEAADRGRRLDHIWSSQDLGPSLEK-------IDILREARGWNRPSDHV 259

Query: 297 PISIDYDF 304
           P++  + F
Sbjct: 260 PVTAHFRF 267


>gi|301310211|ref|ZP_07216150.1| exodeoxyribonuclease III [Bacteroides sp. 20_3]
 gi|300831785|gb|EFK62416.1| exodeoxyribonuclease III [Bacteroides sp. 20_3]
          Length = 284

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 87/307 (28%), Gaps = 77/307 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79
           +K++++++N N L    G  L                ++      D++ +QE  +     
Sbjct: 30  EKLKIITYNTNGLRAAVGKGLP---------------EWLAQEQPDVLCIQETKLQPDQF 74

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            ++ F    +  +  + +   +          + +A+  K        +   G       
Sbjct: 75  PSETFEALGYKSYLFSAQKKGY----------SGVAILTKQEP----DHIEYGMGIEKYD 120

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      +  +   + ++ ++  S    D  ++             +  + ++ + +
Sbjct: 121 NEGRF-----LRADFGDVSIVSVYHPSGTSGDERQD-------FKMLWLEDFQKYVVELQ 168

Query: 200 ESLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +S    ++ GD+N                         +   + +    +        D 
Sbjct: 169 KSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMTRFLSAGFTDTFRFLNPDK 228

Query: 244 RCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +     + R           IDY ++  N    +          +           SDHC
Sbjct: 229 QEYTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVKAAYILNDAVH-----------SDHC 277

Query: 297 PISIDYD 303
           P  ++ +
Sbjct: 278 PAVLEIE 284


>gi|289435119|ref|YP_003464991.1| exodeoxyribonuclease III [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171363|emb|CBH27905.1| exodeoxyribonuclease III [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 251

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y  ++DADI  LQE     A    
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFDSVDADIFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKKEPLSVQYGLGIEEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                        +  ++ +  +   
Sbjct: 91  -----VITLEFEKFFMVTVYTPN-------SQAELKRLDYRMTFEDAILAYVKK-LDETK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTAFLEAGFVDSFRYFYPDLEDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNIGWRIDYFVVSERLKDNLVDAKIHPDVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|229175769|ref|ZP_04303275.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
 gi|228607720|gb|EEK65036.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
          Length = 337

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 35  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKKMLSFLQNENSDFTL 94

Query: 71  LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+            +  + K  P            + +              ++   K
Sbjct: 95  LQEVDIKSMRSFDVNGHEFLKKGLPDYALSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 154

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENT 176
                 Q + L G +    R  +  R  VE  + +N  K   ++++HL +          
Sbjct: 155 YTVQTAQRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA---------- 204

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK+++ +  E+    ++ GD+N+ ++ +  +D  +    P   +  
Sbjct: 205 YDEGGKIRKQQVEFLKEYMNKHYENGDYVIMGGDWNQLLSNVQLSDPKFVKERPEWLVEL 264

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 265 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 322

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 323 EN----------SDHNPVSAVF 334


>gi|300726495|ref|ZP_07059941.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bryantii B14]
 gi|164416537|gb|ABY53604.1| non-specific nuclease [Prevotella bryantii]
 gi|299776223|gb|EFI72787.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bryantii B14]
          Length = 344

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/348 (11%), Positives = 97/348 (27%), Gaps = 60/348 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKN---------SVK 48
           ++K +L L  + + C    AQK      +  +N   L +        +         +  
Sbjct: 1   MKKNILLLAAWFMACLTVSAQKSFVGYAIGFYNQENLFDTCHDEGKNDYEYLPAKGWNGL 60

Query: 49  RTTSDYTLLRQYAKNLDADIV-------FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
           + ++    + Q    +  D++        L E+ + N +  +  +              H
Sbjct: 61  KYSNKLKNMAQVLSEMGTDVIPVGCAAIGLAEVENDNVLKDLVAQP---ALAKRGFNFVH 117

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
            +      I  A+    +  +V      P +      S    R  + +   +  + + ++
Sbjct: 118 IEGPDRRGIDCALLYNPQLFQVRNVKLVPYVQELKKDSAFYTRGFLTVSGTLANEHVTII 177

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             HL S         + +        Q + +KD +  +++     ++ GD N        
Sbjct: 178 VCHLPSRFSASFYRESGAR-------QIKVVKDSL-LREDPTCKVIVMGDMNDDPEDASM 229

Query: 221 NDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
             +         +  ++    +     S              D  ++          + +
Sbjct: 230 YKELAAKENINKVKADEMFNPWYNVHQSGTGTLSYQGAWNLFDQIILSPTLINQNGSKDY 289

Query: 276 SEILYNEDDIKSRGKR-----------------------LSDHCPISI 300
           S + Y ++ I  R                           SDH P  +
Sbjct: 290 STLKYWKNQIFRRDYMFQTEGKYKGSPKRTTAGGVWLNGYSDHLPTVV 337


>gi|330504967|ref|YP_004381836.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01]
 gi|328919253|gb|AEB60084.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01]
          Length = 363

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 89/325 (27%), Gaps = 68/325 (20%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WN+  L+                  + S +        + +  +    D+V 
Sbjct: 52  GQALKVMTWNVQYLAGKRYVFWYDLPSGDGPDERPSSEDLALTLNEVVRVLRAEQPDVVL 111

Query: 71  LQEMGSYN---------AVAKVFPKNTW----CIFYSTERLINHSKRDSNNDIHTAIAVR 117
           LQE+             A+ +    + +      FY     + H +   +  +      R
Sbjct: 112 LQELHDNAKASDHQDQLALLQARLGDLYPCSSQAFYWKAGFVPHPRILGSVGMKLGTLSR 171

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175
            +  R  +   P+L A     +   +RA+ +       G+++  ++ H  +F    +   
Sbjct: 172 FQIARAERLQLPMLEADPLSRQFQLKRALLVSYLPIRGGEELVAINTHFDAFAQGQNTMQ 231

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------------------- 215
                      Q Q   D + Q + +   +V+ GD N                       
Sbjct: 232 R----------QVQMTDDLLQQLQGTGKTWVLGGDLNLLPPGQFQHLPEGQRSWYAADSE 281

Query: 216 -NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
              L        ++       +      S  +          +DY               
Sbjct: 282 LQDLARRYPMIPSLQQASGAEQAQWYTHSPNDPAA-HGPDRTLDYLFYSPRL-------- 332

Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299
                      +     +SDH P+ 
Sbjct: 333 ---TPLASQVRQHDTLSISDHLPVI 354


>gi|302345504|ref|YP_003813857.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149821|gb|ADK96083.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 258

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/250 (9%), Positives = 66/250 (26%), Gaps = 23/250 (9%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++ + ++NI   +  +            T   + L  +      +I   QE+       
Sbjct: 20  QRLYVGTYNIRYNNPNDEKEGNA-----WTQRCSHLCDFINFEQPEIFGTQEVLVDQLHD 74

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +++                +             +        P   +   +  A 
Sbjct: 75  LMKGLDSYGYIGVGRDDGKEKGEYAAIFYKKNQLSLLDSGNFWLSPTPERASL-GWDAAC 133

Query: 142 NRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R         +++GK+ +  + H+               S  L+ ++   L        
Sbjct: 134 IRICTWGKFQDKVSGKQFYFFNAHM-----DHVGTVARRESARLILKRINQL-------- 180

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPI 257
              +P ++ GDFN               +  +       +   +    +    ++    I
Sbjct: 181 SKGLPTILTGDFNVDQTDEIYQIFSNSGVLRDCYTNALQRMTPTGTWNDFMQDSRSKSRI 240

Query: 258 DYFVMDQNAY 267
           D+  +  +  
Sbjct: 241 DHIFVSSDFK 250


>gi|255956321|ref|XP_002568913.1| Pc21g19220 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590624|emb|CAP96819.1| Pc21g19220 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 289

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 79/291 (27%), Gaps = 19/291 (6%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        +   +R    +       ++  A  + LQE+        
Sbjct: 7   PIRVLTHNIRY-ATSSPFKGEQPWAERRQLLFNEFEYETRHCAASFLCLQEVLHNQLGDI 65

Query: 83  V--------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +             W          + +   S      A+        V     P   +K
Sbjct: 66  LARLNQDAELETPEWEYIGVGRDDGHEAGEYSPIIYRPAVWELLHWETVWLSKTPETPSK 125

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S+  A  R     +      +  VL ++       D    +   +  ++  +       
Sbjct: 126 -SWDAASIRIVTIGVFTHRASRNTVLAMNTHL---DDQGSQSRFEAARIIIDKISEYSQ- 180

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252
             +  + +    +AGDFN + N     +     +D    +    +  +            
Sbjct: 181 -NKFAKLISGTFLAGDFNSEENQEAYQELTRSLLDAYKQIESSRRYGNHITWTGFGYEDE 239

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               IDY ++     +   Q           +    G   SDH  + +D  
Sbjct: 240 PASRIDYVLVRPTGAQG--QRLAVIGYAVLGNRFDDGVLSSDHRAVIVDLT 288


>gi|254818951|ref|ZP_05223952.1| exodeoxyribonuclease III [Mycobacterium intracellulare ATCC 13950]
          Length = 268

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 69/304 (22%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   S    +  +    D D++ +QE    ++    
Sbjct: 1   MRIATWNVN----------------SIRSRLPRVLDWLARTDVDVLAMQETKCSDS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       +    +A+  +      Q         S       
Sbjct: 41  ------QFPTLPFFELGYEVAHVGFNQWNGVAIASRVGLDDVQIGFDGQPTWSGKPEVAA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ES 201
            A    +      + +  +++ +   L      Y             L+D        + 
Sbjct: 95  VAEARALAATCGGVRLWSLYVPNGRALGDPHYAYKLD------WLAALRDSAEGWLRDDP 148

Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                +AGD+N                           +  I                  
Sbjct: 149 GAAIALAGDWNIAPQDDDVWSMEFFAGATHVSAPERRAFNAIVEAQFTDLVRPFAPGPGV 208

Query: 247 ANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +        + ID+ +                     D  + +GK  SDH P+
Sbjct: 209 YTYWDYTRLRFPKRQGMRIDFILGSPALASR-------VTDARIDREERKGKAASDHAPV 261

Query: 299 SIDY 302
            +D 
Sbjct: 262 LVDL 265


>gi|255557747|ref|XP_002519903.1| RNA exonuclease NGL1, putative [Ricinus communis]
 gi|223540949|gb|EEF42507.1| RNA exonuclease NGL1, putative [Ricinus communis]
          Length = 443

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 93/347 (26%), Gaps = 58/347 (16%)

Query: 13  LVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   T     +VRLVS+NI      +        +   +  S    +    KNL+AD + 
Sbjct: 95  VFSTTKPDGIRVRLVSYNILAQVYVKSSYFPHCPSPSLKWKSRSKAILTILKNLEADFLC 154

Query: 71  LQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK----------- 118
           LQE+  Y++  K     + +   Y                   A  + +           
Sbjct: 155 LQEVDEYDSFYKQNMEIHGYSSIYIQRSGQKRDGCGIFYKHDCAELLLEERIEYNDLVNS 214

Query: 119 --------------------KNVRVLQQSYPLLGAKDSFSRAGNR-------RAVELLVE 151
                               K+V     +      +D       R         +     
Sbjct: 215 VQEEACLCGDKPIETDANGDKSVEPKNGASSKSTPEDRGDPNDPRVRLKRDCIGIMAAFR 274

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
           +      ++ +      +     +        L  +    K  ++ + E      +AGDF
Sbjct: 275 LKDAFRHIVIVANTHLYWDPEWADVKLAQAKYLLSRLSQFKILVSNQFECSPSLFLAGDF 334

Query: 212 NRKINYLGN------NDDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYF 260
           N              N  F  T++  D L       +   +      N        +DY 
Sbjct: 335 NSIPGDKVYQYVVSGNSSFAPTVECLDDLPIPLCSVYGHTRGEPPFTNCTPDFTNTLDYI 394

Query: 261 VMDQNAYKFLIQESFSEILY----NEDDIKSRGKRLSDHCPISIDYD 303
               +  + +   SF E+      +           SDH PI  +++
Sbjct: 395 FFSPD--EKITPISFLELPEGNSPDVLGGLPNFYHPSDHLPIGAEFE 439


>gi|281211659|gb|EFA85821.1| hypothetical protein PPL_01052 [Polysphondylium pallidum PN500]
          Length = 610

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 79/311 (25%), Gaps = 58/311 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
            +++++N+   +                    ++       D +++  QE          
Sbjct: 282 FKILTYNLWNYNNP------------WKQRRNMIVDNIVKQDPELIAFQEARYCQWEGET 329

Query: 75  ----------GSYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
                        N +  +    ++    Y    + +    +     +  +A+  K    
Sbjct: 330 DYMPNPRMMGQERNQIQHLVNLLSFQNKKYHYTFIPSMVYLNGQQMQYEGLAILSKYPIK 389

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              S  L    +       R  + +LV+     + +L  H                    
Sbjct: 390 DTSSIKLSRDFNDNEDVHQRSCLRVLVDTPNGPLNLLTSHFSLSLSGAVRN--------- 440

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
               A  + ++  Q +    P +  GD N   +         K ++ N +        D 
Sbjct: 441 ----AFEVTNYTKQFES---PQIFVGDLNSVPDSHAIQFLVGKVVENNQTGDFQDSFTDW 493

Query: 244 R----------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                        +         IDY +      + +  +         DD  +R    S
Sbjct: 494 TSTNRPVDFVGTYSTLGGTPNKRIDYIMKRGAELELVDFKQLGSEPQPADDDPNREVYAS 553

Query: 294 DHCPISIDYDF 304
           DH  +   Y +
Sbjct: 554 DHLSLVATYKW 564


>gi|229592767|ref|YP_002874886.1| hypothetical protein PFLU5388 [Pseudomonas fluorescens SBW25]
 gi|229364633|emb|CAY52546.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 362

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/343 (12%), Positives = 98/343 (28%), Gaps = 74/343 (21%)

Query: 12  FLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YT 55
             V C A  A      Q +++++WN+  L+ +  V  +  +      D            
Sbjct: 36  LPVSCVAPRAPTLLPGQALKVMTWNVQYLAGKNYVFWYDTADGSGPDDRPTVEDMAASLD 95

Query: 56  LLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINH 101
            + +  ++   DI+ LQE+                   +  ++P +     +  + + + 
Sbjct: 96  EVARVIRDEQPDILLLQELDENAKPSHYQDQLALLQERLVDLYPCSVQAFDWKADFVPD- 154

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWV 159
                +     A   R +     +   P   A     +   + A+ L      +G ++ V
Sbjct: 155 WHIFGSVGRKLATLSRYQIEHAERLQLPAPEANIISRQFQPKPALLLTYLPLSDGGQLAV 214

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           L+  L       S           + +Q +     + + +    P++I GDFN       
Sbjct: 215 LNTRLDGDSPGRS----------AVQEQVKTTVKLLDKFEGRGTPWLIGGDFNLLPLGQF 264

Query: 220 NNDDFWKTID---PNDSLIRFPKEKDSRCNANKN-----------------LRNKIPIDY 259
              D  K       ++  + + K      N+  +                       +DY
Sbjct: 265 LRLDAGKRGQYSPDSELHLLWDKYPMIPSNSQSSGIDREKWLTHFPNDPSVDGPDRTLDY 324

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                     +    R+S+H P+   +
Sbjct: 325 LFYSP-----------RIKRVEAKVRQEDTLRISNHLPVIARF 356


>gi|253996227|ref|YP_003048291.1| Endonuclease/exonuclease/phosphatase [Methylotenera mobilis JLW8]
 gi|253982906|gb|ACT47764.1| Endonuclease/exonuclease/phosphatase [Methylotenera mobilis JLW8]
          Length = 251

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 48/287 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----Y 77
             +R+ ++NI+                 T+      R+  + L AD+VFLQE+      +
Sbjct: 3   NTLRIATFNIHKGLTHFN----------TSLSLHHQRELLRKLHADVVFLQEVRDVHHEH 52

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           +     +P      F +     +++          H   A+  K   +   +  +     
Sbjct: 53  SRRFDAWPTAGQMEFLADTIWKDYAYGKNAVYPAGHHGNALLSKFPIIKTTNIDISA--- 109

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
               +  R  +   + I      +  I +    F                QQ   +KD+I
Sbjct: 110 --HSSEERGMLHSEINIPNWDTPLHTICVHLGLF-----------ARWRKQQLILIKDYI 156

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            +   +  P ++AGDFN      G +               F  +      +  +    +
Sbjct: 157 QRHIPAHSPLIVAGDFNDWGMRSGRH-----FSHQVGLQEVFAHQNGKPARSFPSWLPIL 211

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D         + +   S +  +           +LSDH  +S   
Sbjct: 212 RLDRIYTRGFKIQHVEVHSGAHFV-----------KLSDHAMLSATL 247


>gi|167723990|ref|ZP_02407226.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei DM98]
          Length = 296

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 75/286 (26%), Gaps = 56/286 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
                +++R+ ++NI+                 T S    +      L AD++ LQE+  
Sbjct: 4   AQPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPL 52

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A           +   T                   AV  +      +   L     S
Sbjct: 53  GGARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----S 104

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F     R A++  +E     + V+  HL               S +  S Q   L   + 
Sbjct: 105 FGNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LA 148

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N         + F +       +  F +    R            
Sbjct: 149 AFDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS-- 197

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +     ++L+  +                   DH P+    
Sbjct: 198 LDRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 233


>gi|57157231|dbj|BAD83645.1| deoxyribonuclease I [Anguilla japonica]
          Length = 282

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 94/302 (31%), Gaps = 30/302 (9%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           ++     ++         + + ++NI +           +      +   ++ +      
Sbjct: 3   IIGAFLLILAFVELSTGSLFIGAFNIRSFG---------DKKASNATLVDIIVKIVHMY- 52

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVR 122
            DI+ +QE+   +  A            S  +           + +        R+ +V 
Sbjct: 53  -DILLIQEVRDSDLSATKKLMQNVNGGSSPHKYKYIVSEPLGRNTYQERYLYLYREDSVS 111

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           V++      GA+ S +   NR    ++      ++    +  +     ++++   +    
Sbjct: 112 VVKNFTYDDGAEASGTDTFNREPFVVMFSSPHTRVPEFALVPQHTSPDEAVKEIDALYDV 171

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           ++  +A+W          +    ++ GDFN   NY+  +D     +  + S      +  
Sbjct: 172 IVDIRARW----------NTDNIILLGDFNAGCNYVAGSDWQQIRLYTDKSFHWLIPDSA 221

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED--DIKSRGKRLSDHCPISI 300
               ++ N       D  V      + ++  S S   Y             +SDH P+ +
Sbjct: 222 DTTVSHTNCPY----DRIVATTTMMEAVVPHSASVYDYMTSLKLKLDMALAVSDHFPVEV 277

Query: 301 DY 302
             
Sbjct: 278 QL 279


>gi|34762326|ref|ZP_00143329.1| DNASE I HOMOLOGOUS PROTEIN DHP2 PRECURSOR [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|237741833|ref|ZP_04572314.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp.
           4_1_13]
 gi|27887980|gb|EAA25044.1| DNASE I HOMOLOGOUS PROTEIN DHP2 PRECURSOR [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|229429481|gb|EEO39693.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp.
           4_1_13]
          Length = 279

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 97/307 (31%), Gaps = 38/307 (12%)

Query: 1   MIR-KYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M + K +L+++F L    +  S+A +  + S+NI  L                  D    
Sbjct: 1   MKKGKLLLSIIFVLFFSLSVLSLADEAYIASFNILRLGA-------------AKKDIPQT 47

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAV 116
            +  +    DIV L E+ + + V ++  +         +  I+     S+    + A   
Sbjct: 48  AKILQGF--DIVGLVEVINRDGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYVY 105

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +K  V+ ++        K S      R       +I       + +H             
Sbjct: 106 KKDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------N 153

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                   + +   + D+   K +      IAGDFN       +    +K  D     I 
Sbjct: 154 NEAQRKAENFKMVDVYDYFQDKDKKENDIFIAGDFNL-YALDESFRPLYKHADKITYAID 212

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              +         N       D F   Q   +     S   + ++ D+ K   + +SDH 
Sbjct: 213 PAIKTTIGTKGRANSY-----DNFFFSQKYTQEFTGSS-GALDFSGDNPKLMREIISDHI 266

Query: 297 PISIDYD 303
           P+ I  +
Sbjct: 267 PVFIVVE 273


>gi|134282657|ref|ZP_01769361.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 305]
 gi|226199100|ref|ZP_03794662.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|254183777|ref|ZP_04890369.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1655]
 gi|134246214|gb|EBA46304.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 305]
 gi|184214310|gb|EDU11353.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1655]
 gi|225928875|gb|EEH24900.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pakistan 9]
          Length = 338

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               +++R+ ++NI+                 T S    +      L AD++ LQE+   
Sbjct: 47  QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPLG 95

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A           +   T                   AV  +      +   L     SF
Sbjct: 96  GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A++  +E     + V+  HL               S +  S Q   L   +  
Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                +P ++ GD N         + F +       +  F +    R            +
Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +     ++L+  +                   DH P+    
Sbjct: 241 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275


>gi|323488215|ref|ZP_08093465.1| Endonuclease/exonuclease/phosphatase [Planococcus donghaensis
           MPA1U2]
 gi|323398073|gb|EGA90869.1| Endonuclease/exonuclease/phosphatase [Planococcus donghaensis
           MPA1U2]
          Length = 279

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 87/293 (29%), Gaps = 60/293 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+++S+NI      +GV            D     Q  ++  A I+ LQE+  + +V   
Sbjct: 11  VKVMSFNIAHGLGMDGV-----------VDLEKTAQVIEDSCATIIALQEVDRHFSVRSS 59

Query: 84  F---------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           F             +  + +   +          +      +  K      +++ L    
Sbjct: 60  FVDQVGWLSERLGMYAAYGANMDVTPLDSE--RPNQQYGNVILSKYPIKYNENHLLTQVY 117

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F     R  +E ++E++G  + V + HL        +                   + 
Sbjct: 118 CPFGNNEQRGILETVIEVDGSYVSVFNTHLALKDEELEVSVD----------------EI 161

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---- 250
           +    +S  P +I GDFN   +    +    K    +  L     +  +  +   N    
Sbjct: 162 LAITGKSHFPRIITGDFNAPASN--VHIQKLKRHFRDAFLKMKRGDAYTYPSPYVNKETG 219

Query: 251 --LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              R    IDY   D                            +SDH PI++D
Sbjct: 220 EVFRPATRIDYIFADPYLDVVQAAVI--------------ETAVSDHLPIAVD 258


>gi|297569473|ref|YP_003690817.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2]
 gi|296925388|gb|ADH86198.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2]
          Length = 490

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 80/313 (25%), Gaps = 79/313 (25%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             A     +RL SWN+N L                        + A  LDAD++ +QE+ 
Sbjct: 230 SAAPGGTSLRLASWNVNGLRAIAKKGF---------------AELAGELDADLLAIQEIK 274

Query: 76  S--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +      A+      +  F+   +   +S     +              +          
Sbjct: 275 AHPDQLPAEARALPGYQAFWLPAKRKGYSGVAIYSR-------------LEPLKVLYGMG 321

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           ++       R     ++ +     ++++ +L +     +        C    Q  + L  
Sbjct: 322 QEEKYEQEGR-----VLTMEFADFFLVNAYLPNAQPELARLPFKLDFCRHFQQFCENLA- 375

Query: 194 WITQKKESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFP 238
                  +    V+ GD N                   +      +      N     F 
Sbjct: 376 -------TQKNVVVCGDLNVAHREIDLARPQENQQSPGFSPAERAWLDGFLANGFTDTFR 428

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                  N       +           IDYF +D    + + +                 
Sbjct: 429 LFNQEGGN-YTWWSYRGGARQRNVGWRIDYFCIDSAGRRRVREAGIR-----------PE 476

Query: 290 KRLSDHCPISIDY 302
              SDHCP+++  
Sbjct: 477 IMGSDHCPVTLTL 489


>gi|164416540|gb|ABY53606.1| non-specific nuclease [Prevotella bryantii B14]
          Length = 344

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/348 (11%), Positives = 97/348 (27%), Gaps = 60/348 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKN---------SVK 48
           ++K +L L  + + C    AQK      +  +N   L +        +         +  
Sbjct: 1   MKKNILLLAAWFMACLTVSAQKSFVGYAIGFYNQENLFDTCHDEGKNDYEYLPAKGWNGL 60

Query: 49  RTTSDYTLLRQYAKNLDADIV-------FLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
           + ++    + Q    +  D++        L E+ + N +  +  +              H
Sbjct: 61  KYSNKLKNMAQVLSEMGTDVIPVGCAAIGLAEVENDNVLKDLVAQP---ALAKRGFNFVH 117

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
            +      I  A+    +  +V      P +      S    R  + +   +  + + ++
Sbjct: 118 IEGPDRRGIDCALLYNPQLFQVRNVKLVPYVQELKKDSAFYTRGFLTVSGTLANEHVTII 177

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             HL S         + +        Q + +KD +  +++     ++ GD N        
Sbjct: 178 VCHLPSRFSASFYRESGAR-------QIKVVKDSL-LREDPTCKVIVMGDMNDDPEDASM 229

Query: 221 NDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
             +         +  ++    +     S              D  ++          + +
Sbjct: 230 YKELAAKENINKVKADEMFNPWYNVHQSGTGTLSYQGAWNLFDQIILSPTLINQNGSKDY 289

Query: 276 SEILYNEDDIKSRGKR-----------------------LSDHCPISI 300
           S + Y ++ I  R                           SDH P  +
Sbjct: 290 STLKYWKNQIFRRDYMFQPEGKYKGSPKRTTAGGVWLNGYSDHLPTVV 337


>gi|333009779|gb|EGK29228.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri K-272]
 gi|333020444|gb|EGK39707.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri K-227]
          Length = 253

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAERTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|72390874|ref|XP_845731.1| RNA-editing complex protein MP100 [Trypanosoma brucei TREU927]
 gi|62175829|gb|AAX69956.1| RNA-editing complex protein MP100 [Trypanosoma brucei]
 gi|70802267|gb|AAZ12172.1| RNA-editing complex protein MP100 [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 894

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 87/299 (29%), Gaps = 35/299 (11%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            V   ++L++WN+         +          +   Y ++ +  +  DAD+V +QE+  
Sbjct: 613 PVKASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVIAKIIEEEDADVVGMQEVE- 671

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                       +  F S   LI      S   +  AIA     + + ++  P+      
Sbjct: 672 ----------PVFWEFLSKRPLIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYL 721

Query: 137 FSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
              A          + +++    + +   HL +           S   +L     + L  
Sbjct: 722 NVPAWTNHVSLMPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTL-- 779

Query: 194 WITQKKESLVPFVIAGDFNRKIN------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                       V  GDFN          +     D W  + PN+       E ++ C  
Sbjct: 780 -------GGGDVVTMGDFNDWPTNEFIMPHESQYVDCWPVLHPNNPGKTM-DETNTFCKL 831

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                     D   +       +          N+++  +        SDH  +SI + 
Sbjct: 832 KVEEMFFGRSDKVFLRSRRLVPVEAHLVGTRSVNDENNNADAPAYLFPSDHYGVSITFS 890


>gi|83855258|ref|ZP_00948788.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. NAS-14.1]
 gi|83843101|gb|EAP82268.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. NAS-14.1]
          Length = 262

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/306 (9%), Positives = 67/306 (21%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       ++ +       D++ LQE  S      
Sbjct: 2   PFTLATWNIN----------------SVRLREPIVLKLLAEHGPDVLCLQECKSPVDK-- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +                +  +A+  +   V            +      
Sbjct: 44  -------IPTAAFIEAGYTHMVARGQKGYNGVAILSRLPLVDAGDQDFATLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   +E     + V + ++ +    D  +   +            ++DW    K   
Sbjct: 93  ---VAAKLENG---VTVHNFYVPAG--GDVPDREVNEKFGQKLDYLADMRDWFHGDKPEK 144

Query: 203 VPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GD N         D               +           +   ++   + N 
Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEKLAETQDAGGFVDVTRQDIPQGNL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                        ++ SDH P
Sbjct: 203 YSWWSYRAKDWDAADKGRRLDHVWATPDISGAAHSS-------RVLRDARGWEKPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|317479326|ref|ZP_07938461.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|316904614|gb|EFV26433.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 335

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/341 (11%), Positives = 88/341 (25%), Gaps = 57/341 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46
           M +  VL   +  V    +   +     +  +N+  L +    +   +           +
Sbjct: 1   MRKLLVLCSFWLCVATLGAQNAERKLYSVAFYNLENLFDTIHDAGKNDYEFLPDGSYQWT 60

Query: 47  VKRTTSDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
            K+  S    L +   +L  D+       + + E  +   +  +        +       
Sbjct: 61  AKKYESKLQNLSKVLGSLSRDLVPEGPAFIGVAEAENSRVLEDLVKHPAISNYEFVHYEG 120

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                     I  A+    K   V      L    +  +    R  + +  ++ G+++ V
Sbjct: 121 P-----DRRGIDCALLYDPKQFSVTHSKLVLSTPFEGDTVHLTRGFLIVDGQLAGERVCV 175

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S           SP     ++Q + LKD + +  +  +  ++ GD N       
Sbjct: 176 IVNHWPSR-------GAKSPVRVHAARQVKALKDSLMR-SDKKLKLIVMGDMNDDPMDES 227

Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                      +          +   +D               D  V+ +   K      
Sbjct: 228 MEVLGARKYPKQVKKGEFYNPWWVTLEDKGVGTLLYRGKWNLFDQIVISKPLLKAKKGLR 287

Query: 275 FSEI------------------LYNEDDIKSRGKRLSDHCP 297
           +                            ++     SDH P
Sbjct: 288 YDHNEVFIRDYLIQQDGKYKGSPLRTHGGRTWLNGYSDHLP 328


>gi|317051838|ref|YP_004112954.1| exodeoxyribonuclease III [Desulfurispirillum indicum S5]
 gi|316946922|gb|ADU66398.1| exodeoxyribonuclease III [Desulfurispirillum indicum S5]
          Length = 272

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 79/285 (27%), Gaps = 61/285 (21%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            + +  L    +    D++ LQE        ++FP +         R + +         
Sbjct: 13  RAHFHQLEAIIQKYQPDVIGLQE---TKVSDELFPVD-------AIRELGYCSEFHGQPG 62

Query: 111 HTAIAVRKK-NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           H  +A+  +     +++S+P  G        G   A+      +G +I VL+       F
Sbjct: 63  HYGVALLSRAQPNSVRKSFPGDGPDVQRRFIGADYAL-----SDGSRITVLN-----GYF 112

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------- 218
                  +        +    L  ++ Q  +     ++ GD N                 
Sbjct: 113 PQGESRDHPQKFPAKEKFYADLTAYLQQCHQPAQQLLLMGDMNIAPTDSDVGIGEDNARR 172

Query: 219 ----------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----------I 257
                          +++++     L    +              +             I
Sbjct: 173 WLRSGKCCFLPEERLWYQSLTDWG-LRDAHRLLFPDMQELSWFDYRSRGFEREPKRGLRI 231

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+ ++     + L+           D      ++ SDHCPI +  
Sbjct: 232 DHMLVTTPLEEKLLDGGI-------DYEIRALEKPSDHCPIWVKI 269


>gi|316931738|ref|YP_004106720.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
 gi|315599452|gb|ADU41987.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
          Length = 270

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 69/306 (22%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L +WNIN                       L+ ++ K    DI+ LQE          
Sbjct: 3   LTLTTWNIN----------------SVRLRIDLVAKFLKAQRPDILCLQETKCP---DDA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +         +N          +  +AV  K               DS       
Sbjct: 44  FPLKRFKRLGYDHIALN------GQKGYHGVAVISKLPFAATDIRTFCDIIDSRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V+       ++  +       D  +   +P           +K           
Sbjct: 93  --ISVSVKTADDAPPLVLHNFYVPAGGDIPDPAVNPKFKHKLSFLDEMKACEPLHPAGDQ 150

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N   +                           +   + +    +        
Sbjct: 151 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPVECEKLLAVLRAGNWVDVARERIPLDQKV 210

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  + +               +          R SDH P
Sbjct: 211 YTWWSYRAADWTVGDRGRRLDHIWVSEALKDR-------VTDFKILRDARSWDRPSDHVP 263

Query: 298 ISIDYD 303
           +++  +
Sbjct: 264 VTMTME 269


>gi|301612064|ref|XP_002935555.1| PREDICTED: deoxyribonuclease-1-like isoform 2 [Xenopus (Silurana)
           tropicalis]
          Length = 350

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 88/301 (29%), Gaps = 29/301 (9%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L ++  +  C        ++ S+NI   S                    LL +     + 
Sbjct: 3   LLVLVAVTACFLQAGFSFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE- 52

Query: 67  DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            ++ ++E+      A+  +  + +     +   LI+     S+     A   R+  V+ +
Sbjct: 53  -VIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYIYREDIVKPV 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +  +   G ++  + +  R             +  +           S +       +L 
Sbjct: 112 EWYHYDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAVMEVDALY 167

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                  +         +   +I GD+N   +Y+         +   + L     +K+  
Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVAARHWPIIRLRHAEELAWLIGDKEDT 221

Query: 245 CNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301
             +          D  V         +I  +     Y+     +    K +SDH PI ++
Sbjct: 222 TVSTNTN---CAYDRMVAGGQQLQSGIIPGTAKAFNYHVAYDLTYEMAKAVSDHYPIEVE 278

Query: 302 Y 302
            
Sbjct: 279 L 279


>gi|78187058|ref|YP_375101.1| hypothetical protein Plut_1196 [Chlorobium luteolum DSM 273]
 gi|78166960|gb|ABB24058.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
          Length = 348

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/323 (10%), Positives = 75/323 (23%), Gaps = 57/323 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT-----------LLRQYAKNL--DAD 67
            + + L+ WN+  L +        +                      +    K +    D
Sbjct: 31  PESLLLLWWNVENLFDTTDDPGISDEEFTPEGRLHWTPKKLLLKEMRIAYVMKAIATHPD 90

Query: 68  ------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                 ++   E+ +     +   K     + +          DS +     IA+     
Sbjct: 91  YGQLPAVLAFAEVENGAVFRRALQKIKGARYRAL-------YHDSPDLRGIDIALAYDPE 143

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           R+                   R  +    +  G+   ++  H  S  F  +L        
Sbjct: 144 RLDFTGMKTYSVP--QDGRPTRDIIVAGFKNRGRPFTLILNHWPSRAFGSALTEKKRIMA 201

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           + +++ A          +      ++ GDFN              T++      R     
Sbjct: 202 ARVARAAADSLLL----QNPDADIIVMGDFNDSPQDRSVRRTLRGTLNR-LQAQRAKDGT 256

Query: 242 DSRCN-------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSE----------------- 277
              C        +         ID  ++ +         +                    
Sbjct: 257 LYNCWGGSSQPGSYSYRGRWERIDQILVSKGMLSGPGIRTDEPGAFSCFFFRPMFTKSGK 316

Query: 278 ILYNEDDIKSRGKRLSDHCPISI 300
             +   +        SDH P+ +
Sbjct: 317 KPWRTYEGGKYSGGYSDHLPLLL 339


>gi|294341555|emb|CAZ89972.1| putative Endonuclease/Exonuclease/phosphatase [Thiomonas sp. 3As]
          Length = 278

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 88/288 (30%), Gaps = 48/288 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
           ++R+ S+NI+                   +    L+   + L+ D+VFLQE+        
Sbjct: 2   ELRVASYNIH--------KGVLGHGPAKRASILELQTALQGLEPDLVFLQEVQFLHQRNA 53

Query: 81  AKV--FPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            ++  +P      F +    ++ + R +          A+  +   +      +     S
Sbjct: 54  RRLSGWPALPQHDFLAQALNMHAAYRTNACTRHGEHGNALLSRYPIIDIAHCDV-----S 108

Query: 137 FSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             R   R  + + V +  G  +  + +H   F              +   +Q   L D+I
Sbjct: 109 DHRFEQRGLLHVQVALPKGGPLHCIVVHFGLF-------------AASRQRQTDRLLDYI 155

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCNANKNLR 252
             +  +    ++AGDFN     +G      + +            K S   R        
Sbjct: 156 AAQVPAQAALIVAGDFNDWHGRIGP-QLLQQGLVDVSEPPLKTNGKTSWRKRVRTYPARL 214

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +P+D       +   +                    RLSDH P+  
Sbjct: 215 PLMPLDRIYARAFSASEIGLGW-----------GRAWARLSDHAPLLA 251


>gi|239981665|ref|ZP_04704189.1| exodeoxyribonuclease [Streptomyces albus J1074]
 gi|291453527|ref|ZP_06592917.1| exodeoxyribonuclease [Streptomyces albus J1074]
 gi|291356476|gb|EFE83378.1| exodeoxyribonuclease [Streptomyces albus J1074]
          Length = 264

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 75/304 (24%), Gaps = 71/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + + N+N L                        ++    DAD+V LQE+         
Sbjct: 2   LTVTTANVNGLRAAAKKGY---------------VEWLAATDADVVCLQEVRAEESQLPE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V     W + ++           +       +A+  +      ++       D+  R  
Sbjct: 47  AVRAPEGWHVVFAP----------AAAKGRAGVALLTRRAPERVRTGFGSAEFDTSGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 +  ++ G  + V  ++L S       ++      +   +  + L+         
Sbjct: 95  -----YVEADLPG--VTVASLYLPSGEVGTERQDEKERFMAEFLEYLKELRARA---AAD 144

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               V+ GD+N                             +                 + 
Sbjct: 145 GREVVVCGDWNIAHQEADLKNWKANRKSSGFLPEERAWLDRVYAEAGYADVMRALHPEQA 204

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           ID  V         ++          +   +  +R SDH 
Sbjct: 205 GPYSWWSYRGRAFDNDSGWRIDLHVATPGLAARAVKGQV-------ERAATHEERWSDHA 257

Query: 297 PISI 300
           P+++
Sbjct: 258 PVTV 261


>gi|126728921|ref|ZP_01744736.1| endonuclease/exonuclease/phosphatase family protein [Sagittula
           stellata E-37]
 gi|126710851|gb|EBA09902.1| endonuclease/exonuclease/phosphatase family protein [Sagittula
           stellata E-37]
          Length = 333

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 89/333 (26%), Gaps = 54/333 (16%)

Query: 24  VRLVSWNINTLS----EQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R  ++N+        ++  +        R      +    L    K LDAD V + E  
Sbjct: 1   MRFATYNVEWFDALFDDRGHLIADDGWSGRRDVTRRAQAEALGTVFKVLDADAVMVIEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              +        T        R        +N+     IA+     R+  +  P      
Sbjct: 61  DTGSRRSTTRALTAFAQAFDLRTSATITGFTNDTQQE-IALLYDPARLTVRHDPKATPGA 119

Query: 136 SFSRAGNRRAVEL-----------------LVEINGKKIWVLDIHLKSFCFLDSLENTY- 177
                  R  +++                 +   +G  + ++  HLKS     +      
Sbjct: 120 PGFDTEFRIDLDVDDFPDPVRFSKPPLELAVTTASGHAVHLIGAHLKSKAPHGARSRDDV 179

Query: 178 ----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TI 228
                 +      QA WL+  I          ++ GD N           F +      +
Sbjct: 180 MRLAIANRRKQLAQAIWLRARIDALLADGQSLIVMGDLNDGPGLDEFESLFGRSSVEIVL 239

Query: 229 DPNDSLIRFPKEK----------DSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESF 275
              D+ +  P              +         N+     +DY ++  +          
Sbjct: 240 GQGDTALYDPHAAEALSRRIGAQPATSRFFIEPENRYLQALLDYVMVSPDLMARQPDWRI 299

Query: 276 SE-----ILYNEDDIKSRGKRLSDHCPISIDYD 303
                    + +  ++      SDH P+++D +
Sbjct: 300 WHPFDNPRCWRDPALREALLTASDHFPVTLDLE 332


>gi|291300710|ref|YP_003511988.1| exodeoxyribonuclease III Xth [Stackebrandtia nassauensis DSM 44728]
 gi|290569930|gb|ADD42895.1| exodeoxyribonuclease III Xth [Stackebrandtia nassauensis DSM 44728]
          Length = 265

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 81/306 (26%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           + + + N+N +                 +      ++  +  AD+V LQE+         
Sbjct: 2   LTVTTANVNGIRA---------------AARKGFVEWLSDTTADVVCLQEVRATDEQVPV 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V   + W +  +           + +     +AV  +      Q        D   R  
Sbjct: 47  EVRDVDGWHMIVAP----------AADKGRAGVAVLSRETPARVQVGFGSEEFDVSGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 L V++ G  + V  ++L S       ++      +  ++    L+      +  
Sbjct: 95  -----YLEVDLPG--VTVASLYLPSGETGTPRQDQKERFMAEFAEYLVALRKRA---EAD 144

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               VI GD+N                         +   +  D    +    +      
Sbjct: 145 NRHVVICGDWNIAHQEIDLKNWKANKKTAGFLPEEREWMTRVFDDIGYVDVARRLHPEGP 204

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY +      +              +   +   R SDH 
Sbjct: 205 GPYSWWSYRGRAFDNDAGWRIDYHIATPGLAEAAK-------TAVVERAATHDARWSDHA 257

Query: 297 PISIDY 302
           P+++ Y
Sbjct: 258 PVTVTY 263


>gi|152983806|ref|YP_001346537.1| hypothetical protein PSPA7_1151 [Pseudomonas aeruginosa PA7]
 gi|150958964|gb|ABR80989.1| hypothetical protein PSPA7_1151 [Pseudomonas aeruginosa PA7]
          Length = 361

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/328 (10%), Positives = 91/328 (27%), Gaps = 68/328 (20%)

Query: 21  AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+ +     + +       +R T++        + +  ++   D+V 
Sbjct: 52  GQALKVMTWNIQYLAGKRYIFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 111

Query: 71  LQEMGSYNAVAKVFPKNTW-------------CIFYSTERLINHSKRDSNNDIHTAIAVR 117
           LQE+   ++      +                  +      +       +     A   R
Sbjct: 112 LQEIDDGSSATDDQDQLVLIQERINDLYPCSTQAYEWKSAFVPTPHIFGSVGRKQATLSR 171

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175
            +     ++  P           G R A+ +       G  + VL+          +  +
Sbjct: 172 YRIDSAERRQLPQRDGGLFDRLFGPRPAILVSHLPIDGGGALAVLN----------ARFD 221

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------------------- 215
                   L +Q +  +  + + +    P+++ GD N                       
Sbjct: 222 RPREQDDTLQRQVEMTRALLDELQARRTPWLLGGDLNLLPPGQYAYLLEPLRAPYRADSE 281

Query: 216 -NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
              L        +++    + +         +          +DY     +         
Sbjct: 282 LALLSGRYPMVPSLEEAGGVDQMRWYTHFPNDPRV-HGPDRTLDYLFHSPSL-------- 332

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      +S   ++S+H P+S  +
Sbjct: 333 ---TRLEARVRRSDTLQISNHLPLSARF 357


>gi|298375698|ref|ZP_06985655.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_19]
 gi|298268198|gb|EFI09854.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_19]
          Length = 284

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 87/307 (28%), Gaps = 77/307 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79
           +K++++++N N L    G  L                ++      D++ +QE  +     
Sbjct: 30  EKLKIITYNTNGLRAAVGKGLP---------------EWLAQEQPDVLCIQETKLQPDQF 74

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            ++ F    +  +  + +   +          + +A+  K        +   G       
Sbjct: 75  PSETFETLGYKSYLFSAQKKGY----------SGVAILTKQEP----DHIEYGMGIEKYD 120

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      +  +   + ++ ++  S    D  ++             +  + ++ + +
Sbjct: 121 NEGRF-----LRADFGDVSIVSVYHPSGTSGDERQD-------FKMIWLEDFQKYVVELQ 168

Query: 200 ESLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +S    ++ GD+N                         +   + +    +        D 
Sbjct: 169 KSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMTRFLSAGFTDTFRFLNPDK 228

Query: 244 RCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +     + R           IDY ++  N    +          +           SDHC
Sbjct: 229 QEYTWWSYRFNSRFKNKGWRIDYCMVSDNMKPKVKAAYILNDAVH-----------SDHC 277

Query: 297 PISIDYD 303
           P  ++ +
Sbjct: 278 PAVLEIE 284


>gi|294013493|ref|YP_003546953.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S]
 gi|292676823|dbj|BAI98341.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S]
          Length = 265

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 89/313 (28%), Gaps = 78/313 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78
           +Q + + SWNIN                   +   ++ ++      DI+ LQE  + +  
Sbjct: 2   SQTLSIASWNIN----------------SVRARLDIVERFLTEESPDILCLQETKVVNDT 45

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A +F +  +                +   +H  +A+  K               ++  
Sbjct: 46  FPAGLFRQRGYNHQ-----------VLNGQPMHHGVAILSKIPIREDDRLDWQANGEARH 94

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  V + ++     + + ++++ +   +               Q+  +L+  I   
Sbjct: 95  -------VGVRLDNG---VRIENVYVPAGGDVPD-----REVNPKFGQKLDFLERMIQWS 139

Query: 199 KE-SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
                 P ++ GDFN                   +     +   +  + ND +    K  
Sbjct: 140 STLEDKPTILTGDFNIAPMECDVWSHKQLLNVVSHTPIECEILARLQESNDWVDIGRKFY 199

Query: 242 DSRCNANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
            +          +            +D+  M ++  +  +            +      R
Sbjct: 200 PAPQRLYTWWSYRARDWAESDRGRRLDHMWMTRDVAEKAVSHRVV-------EPIRGWSR 252

Query: 292 LSDHCPISIDYDF 304
            SDH PI  ++ F
Sbjct: 253 PSDHVPIITEFAF 265


>gi|237719516|ref|ZP_04549997.1| exodeoxyribonuclease [Bacteroides sp. 2_2_4]
 gi|260174497|ref|ZP_05760909.1| exodeoxyribonuclease [Bacteroides sp. D2]
 gi|293370159|ref|ZP_06616719.1| exodeoxyribonuclease III [Bacteroides ovatus SD CMC 3f]
 gi|315922764|ref|ZP_07919004.1| exodeoxyribonuclease [Bacteroides sp. D2]
 gi|229451376|gb|EEO57167.1| exodeoxyribonuclease [Bacteroides sp. 2_2_4]
 gi|292634656|gb|EFF53185.1| exodeoxyribonuclease III [Bacteroides ovatus SD CMC 3f]
 gi|313696639|gb|EFS33474.1| exodeoxyribonuclease [Bacteroides sp. D2]
          Length = 253

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L       L                ++    + DI+ LQE          
Sbjct: 1   MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +                +    ++ +A+  K        +   G          R
Sbjct: 38  LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKQEP----DHVEYGMGMEAYDNEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D  +       +      +  + ++ + ++S  
Sbjct: 94  F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVMELQKSRP 141

Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD+N                         +   + +             + +   
Sbjct: 142 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDSFRTLCPEKQEYT 201

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R           IDY ++ +     L +        +           SDHCP+++
Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 250

Query: 301 DY 302
           + 
Sbjct: 251 EI 252


>gi|190893818|ref|YP_001980360.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
 gi|190699097|gb|ACE93182.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
          Length = 267

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 75/307 (24%), Gaps = 68/307 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              + +WNIN                       ++ Q       DI+ LQE    N +  
Sbjct: 2   SFSVTTWNIN----------------SVRLRMPIVEQLVLKHRPDILCLQETKVPNELFP 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P            +            +  +A+  +            G  D+      
Sbjct: 46  AAPL---------RAMGYDHIIIHGQKGYHGVAIASRIPLTEDHRQDYCGVGDARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +  + E   ++I + + ++ +    D  + T +P         + +   +    E+ 
Sbjct: 93  ---ISAIFERGNRRIRLHNFYVPAG--GDEPDRTINPKFGHKLDFIEEM-KLLKANGEAN 146

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GD N                   +     D   + +     L    +   +   
Sbjct: 147 TSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETDGLLEVMRRGAWLDLMRQHVPASEK 206

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+     +    L                    R SDH 
Sbjct: 207 LYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLK-------RIEILKEARGWDRPSDHV 259

Query: 297 PISIDYD 303
           P++  +D
Sbjct: 260 PVTAHFD 266


>gi|304384068|ref|ZP_07366522.1| exodeoxyribonuclease III [Prevotella marshii DSM 16973]
 gi|304334784|gb|EFM01060.1| exodeoxyribonuclease III [Prevotella marshii DSM 16973]
          Length = 250

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 85/303 (28%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N L    G S  ++                + LDAD   LQE          
Sbjct: 1   MKFVSWNVNGLRACVGKSFEES---------------FRMLDADFFCLQETKMQEG-QLN 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  ++          + A D   R    
Sbjct: 45  LQFEGYEAYWNYAEKKGY----------SGTAIYTRHQPQSVSYGMGVEAHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E+ G   +++ ++  +               +   Q  +    +I +  ++  
Sbjct: 91  ---IITLEMPG--FYLVTVYTPN-------SQDGLKRLAYRMQWEEDFLQYIKK-LDAKK 137

Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA-------NK 249
           P +I GD N     +   +         +   + N       +                 
Sbjct: 138 PVIICGDMNVAHEEIDIKNPKTNRHNAGFTDEERNKFTTLLSEGFTDTFRYKYPEQVRYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYFV+       +I       +             SDHCP+ +
Sbjct: 198 WWSYRFQARAKNAGWRIDYFVVSNRLKPQIIDAKIHTAIL-----------GSDHCPVEV 246

Query: 301 DYD 303
           + +
Sbjct: 247 ELN 249


>gi|291523803|emb|CBK89390.1| exodeoxyribonuclease III [Eubacterium rectale DSM 17629]
          Length = 251

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 76/305 (24%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                         +  ++D D   +QE     A    
Sbjct: 1   MKFISWNVNGLRACVQKGF---------------LDFFNSIDVDFFCIQE-SKLQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  KN  +       +   D   R    
Sbjct: 45  LDLPGYHQYWNYAEKKGY----------SGTAIFAKNEPLSVSYGIGIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++  +  +                   +  + L        ++  
Sbjct: 91  -----VITLEYDNFYLVTCYTPNSQNELKRLPYRMQWEDDFREYLKAL--------DAQK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N   N                          +  +     F           
Sbjct: 138 PVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKMTELLGSGFTDTFRYFYPDAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  +     L + +    +             SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFITSKRINDKLKKAAIHTDVL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +D +F
Sbjct: 247 VDIEF 251


>gi|183179612|ref|ZP_02957823.1| hypothetical protein A51_B2651 [Vibrio cholerae MZO-3]
 gi|183013023|gb|EDT88323.1| hypothetical protein A51_B2651 [Vibrio cholerae MZO-3]
          Length = 869

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/373 (12%), Positives = 88/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +        
Sbjct: 713 NSYGMEDPMLVLTDYTSEKYGKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAMTHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKNKVVDATDWHINGAESTLFDYNDEFKGNLPKYNDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|260888950|ref|ZP_05900213.1| hypothetical protein GCWU000323_00109 [Leptotrichia hofstadii
           F0254]
 gi|260861397|gb|EEX75897.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia
           hofstadii F0254]
          Length = 244

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 90/290 (31%), Gaps = 59/290 (20%)

Query: 24  VRLVSWNINTLSE---QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75
           ++ + +NI   +     +     +  + R+      + ++      DIV L E+      
Sbjct: 1   MKFLLYNIRYGTGKYLNQPFKHMRGYLGRSVRHVYRIGKFINKYKPDIVGLVEVDLGSFR 60

Query: 76  --SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             S N    +         Y  +   + +            A+  K   + ++ + L   
Sbjct: 61  MYSKNQATLLGRITRNNNVYQYKYEEDSNYMKFPMVRKQGNAILSKKPVLREEFHYLDIG 120

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                         L++E+  + I V  +HL                     +Q   L +
Sbjct: 121 MKK-----------LIIEVETEDIVVFLVHLALGG-------------KTRQKQIVQLYN 156

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           ++   K+   P ++AGDFN              +   N ++ + P           +   
Sbjct: 157 FVKNCKK---PVIVAGDFNVFWGEEEIEMFLQASNLQNINIRKEP--------TFPSWNP 205

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           K  +D+ +  +         S+  I            +LSDH PI +D++
Sbjct: 206 KRELDFILCSKEIKVK----SYEVIQT----------QLSDHLPILVDFE 241


>gi|160900145|ref|YP_001565727.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1]
 gi|160365729|gb|ABX37342.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1]
          Length = 1284

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 103/351 (29%), Gaps = 75/351 (21%)

Query: 18  ASVAQKVRLVSWNINTLSE------------------QEGVSLWKNSVKRTTSDYTLLRQ 59
           A  A  +++ S N+                        +      NS+         +  
Sbjct: 654 AVGAATLKIASANVLNFFNLTGATSGSSQVMFNTPLGNQQGIRGANSIAELDRQRAKIVA 713

Query: 60  YAKNLDADIVFLQEMGSY-----NAVAKVFPKNT----------WCIFYSTERLINHSKR 104
               L AD+  L E+ +      +A+  +               + +  +       +  
Sbjct: 714 NLLGLGADVYGLMEVQNNGFGPGSAIQDLADALNASADKPAGAVYAVVKAPFTEAAGTVP 773

Query: 105 DSNND-IHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRA--GNRRAVELLVEING--KKIW 158
            +  D I  AI  R   V  V   + P +   D+F+ +  G R  +     + G  ++  
Sbjct: 774 GAGTDAITVAIVYRSDRVTPVGSAAAPNVSTYDAFNASIGGARVPIAQTFAVGGSTEQFT 833

Query: 159 VLDIHLKS------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGD 210
           ++  H KS            + +    + +   + AQ L +W+  +    +    V+ GD
Sbjct: 834 LVVNHFKSKGSVLGGAGNADVLDGQGANNAARVKTAQQLSNWLATRPTGVTSPHVVLVGD 893

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN              T++    +            +         +D+ ++  +    +
Sbjct: 894 FNAYAKEDPI-----TTLESGGYVKVSQGL------SYAFDGMWGSLDHVLVSTSLQPSV 942

Query: 271 IQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYDF 304
            +E    I   E ++                      R SDH PI +  +F
Sbjct: 943 GREVKWAINAEEPEVLDYNVEFKSLDQQASFYAPTAYRSSDHNPILLGLNF 993


>gi|21224501|ref|NP_630280.1| hypothetical protein SCO6176 [Streptomyces coelicolor A3(2)]
 gi|4008541|emb|CAA22510.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 276

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 83/294 (28%), Gaps = 59/294 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81
            +R+ ++NI+  +  +GV            D        + LDAD++ LQE+  +     
Sbjct: 20  PLRIATYNIHAGAGSDGVF-----------DLDRQAAALRALDADVIGLQEVDVHWGARS 68

Query: 82  -------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  ++  +    + ++    ++          +  +AV  +       ++ +    
Sbjct: 69  QGLDVAGELARRLGMRVSFAPIYSLDPVTAGEPRREY-GVAVLSRFPVRSATNHEITRLS 127

Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                     A    E+ +++ G  + V   HL            Y    ++   Q    
Sbjct: 128 TQDENPLPAPAPGFGEVTLKVRGVPVQVFVTHL-----------DYRADPAVRRAQVADT 176

Query: 192 KDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +  + +++         + GDFN +          WK +    +         +      
Sbjct: 177 RRIMARERAELPGAHQFLLGDFNAEPA-APELAPLWKELSDAGAGTPATYPAQAPVK--- 232

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY    ++                           SDH P+  D  
Sbjct: 233 ------RIDYVTAGKDVRIRRTAV-------------PEEPAASDHRPVVADVS 267


>gi|113969313|ref|YP_733106.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4]
 gi|113883997|gb|ABI38049.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4]
          Length = 377

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/365 (9%), Positives = 83/365 (22%), Gaps = 78/365 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFL 71
               +    +++ + N+    E            S  +         +       DIV  
Sbjct: 10  SSANTTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLNQHHPDIVGF 69

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQSY 128
           QE+ S   + ++         ++                  A+A R   + V     + +
Sbjct: 70  QEVFSPEPLRQLA-LQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPEVH 128

Query: 129 PLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFL----------------- 170
            +     S   + +R+ +   V +          +H KS                     
Sbjct: 129 LVAAMGLSSEFSFSRKVLRATVAVPQIGPCDCYVVHFKSKRPGLALEPHPLGLSLNAPSD 188

Query: 171 ----------DSLENTYSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRK----- 214
                              S      +A  L    + +++ +  P ++ GDFN       
Sbjct: 189 LKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDFNDSLSLGA 248

Query: 215 ----------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN------------------ 246
                     ++           +        F   +                       
Sbjct: 249 LDALTLQGEALHSNDIKAAGLGHLSDAALAQVFAHYRLQDAYELFIEANLADNAVHYREH 308

Query: 247 ---ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCP 297
               +        +DY ++         +     + Y   D         R    +DH P
Sbjct: 309 RSPTHYYGPKGSVLDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAP 368

Query: 298 ISIDY 302
           + ++ 
Sbjct: 369 VIVEL 373


>gi|254186690|ref|ZP_04893206.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157934374|gb|EDO90044.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 338

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               +++R+ ++NI+                 T S    +      L AD++ LQE+   
Sbjct: 47  QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPLG 95

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A           +   T                   AV  +      +   L     SF
Sbjct: 96  GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A++  +E     + V+  HL               S +  S Q   L   +  
Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                +P ++ GD N         + F +       +  F +    R            +
Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +     ++L+  +                   DH P+    
Sbjct: 241 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275


>gi|257886665|ref|ZP_05666318.1| AP endonuclease [Enterococcus faecium 1,141,733]
 gi|257895240|ref|ZP_05674893.1| AP endonuclease [Enterococcus faecium Com12]
 gi|293377228|ref|ZP_06623433.1| exodeoxyribonuclease III [Enterococcus faecium PC4.1]
 gi|257822719|gb|EEV49651.1| AP endonuclease [Enterococcus faecium 1,141,733]
 gi|257831805|gb|EEV58226.1| AP endonuclease [Enterococcus faecium Com12]
 gi|292644089|gb|EFF62194.1| exodeoxyribonuclease III [Enterococcus faecium PC4.1]
          Length = 250

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +    LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D+  R    
Sbjct: 45  LDLPGYYQYWN----------YAERKGYSGTAIFAKEPALNATYGMGIDIHDTEGRL--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +++  +  +        +             + L        +   
Sbjct: 92  ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +          +  N  +  F     ++    
Sbjct: 138 PVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  ++    L                      SDHCP+ 
Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHT-----------DIMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|212530796|ref|XP_002145555.1| endonuclease/exonuclease/phosphatase family protein [Penicillium
           marneffei ATCC 18224]
 gi|210074953|gb|EEA29040.1| endonuclease/exonuclease/phosphatase family protein [Penicillium
           marneffei ATCC 18224]
          Length = 298

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 89/295 (30%), Gaps = 26/295 (8%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +  +     K   +R       L    +++    V LQE+        
Sbjct: 8   SLRILTHNIRY-ATSQPFRGEKPWAERQQLLLNELVYSTRHIAESFVCLQEVLHVQLNGI 66

Query: 83  VFP-------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           +         ++ W            +   S      A         V     P   +K 
Sbjct: 67  LAGLNQSAKAEDQWAYIGVGRDDGETNGEYSPIFYKPATWQLHHWETVWLSETPEKPSK- 125

Query: 136 SFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           S+  A  R     + +    GK + VL+ HL      D    +   +  ++    + +  
Sbjct: 126 SWDAASTRIVTIAVFKHQATGKFLLVLNTHL-----DDQGSRSRFEAARII---LRKIDG 177

Query: 194 WITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNL 251
           ++    E  +   V+AGDFN +           +     DS      +E+          
Sbjct: 178 YLDGSYEETISGVVLAGDFNSEETQEAYQVLTGEDSVLVDSQKLTKTEERYGNEITWTGF 237

Query: 252 RNKI----PIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISID 301
             +      IDY ++     K  +   +  + Y         G   SDH  + +D
Sbjct: 238 GYEDEPQKRIDYILLGPVDNKSSVPHPWESLGYAVLASRFDDGVWNSDHRAVVVD 292


>gi|256784304|ref|ZP_05522735.1| hypothetical protein SlivT_07438 [Streptomyces lividans TK24]
          Length = 276

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 83/294 (28%), Gaps = 59/294 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81
            +R+ ++NI+  +  +GV            D        + LDAD++ LQE+  +     
Sbjct: 20  PLRIATYNIHAGAGSDGVF-----------DLDRQAAALRALDADVIGLQEVDVHWGARS 68

Query: 82  -------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  ++  +    + ++    ++          +  +AV  +       ++ +    
Sbjct: 69  QGLDLAGELARRLGMRVSFAPIYSLDPVTAGEPRREY-GVAVLSRFPVRSATNHEITRLS 127

Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                     A    E+ +++ G  + V   HL            Y    ++   Q    
Sbjct: 128 TQDENPLPAPAPGFGEVTLKVRGVPVQVFVTHL-----------DYRADPAVRRAQVADT 176

Query: 192 KDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +  + +++         + GDFN +          WK +    +         +      
Sbjct: 177 RRIMARERAELPGAHQFLLGDFNAEPA-APELAPLWKELSDAGAGTPATYPAQAPVK--- 232

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY    ++                           SDH P+  D  
Sbjct: 233 ------RIDYVTAGKDVRIRRTAV-------------PEEPAASDHRPVVADVS 267


>gi|229124614|ref|ZP_04253799.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
 gi|228658954|gb|EEL14609.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
          Length = 337

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 35  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 94

Query: 71  LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+            +  + K  P            + +              ++   K
Sbjct: 95  LQEVDIKSMRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 154

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 155 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 204

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P+  +  
Sbjct: 205 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 264

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 265 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 322

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 323 EN----------SDHNPVSAVF 334


>gi|67924378|ref|ZP_00517808.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Crocosphaera watsonii WH 8501]
 gi|67853771|gb|EAM49100.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Crocosphaera watsonii WH 8501]
          Length = 262

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 97/306 (31%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                   +    +  +  N   D++ LQE  +   +   
Sbjct: 1   MKIATWNVN----------------SIRTRQPHVIDWLTNNSIDVLCLQETKVIDKDFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F +  +  +   ++  N            AI  R+    ++     ++G + + S   
Sbjct: 45  QPFEELGYHTYIYGQKAYN----------GVAIFSRQPMTDIITGFTDIVGEEKAQSFDE 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKE 200
            +R +  +++     I ++++++ +   L S +  Y        Q  Q LK ++     +
Sbjct: 95  QKRIISGVID----DIRIINVYVPNGASLGSEKYEYK------LQWFQVLKAYLDDLILK 144

Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                 I GDFN  ++                     +  + I        F K      
Sbjct: 145 EAREVCICGDFNIALDDKDIYNSKGKEKHIMSSPVERETLQNILTIGLKDAFRKFTTEGG 204

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           ID+  +    Y+  I  +       ++       + SDH 
Sbjct: 205 H-FSWWDYRSGGFQRNRGWRIDHLYLTHKLYEKAINCTIDIEPRKQE-------KPSDHT 256

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 257 PVILEI 262


>gi|282858966|ref|ZP_06268104.1| exodeoxyribonuclease III [Prevotella bivia JCVIHMP010]
 gi|282588246|gb|EFB93413.1| exodeoxyribonuclease III [Prevotella bivia JCVIHMP010]
          Length = 249

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 79/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G +  ++                  LDAD   LQE          
Sbjct: 1   MKFISWNVNGLRACVGKNFKED---------------FAALDADFFCLQETKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  K+  +   +   +   D   R    
Sbjct: 45  LSFPGYESYWN----------YADKKGYSGTAIFTKHKPLTVTTGIGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +               +   Q     + ++  K +   
Sbjct: 91  -----VITLEMDDFYLVTVYTPN-------SQDELKRLAYRMQWETDFQAYL-HKLDEHK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +  N     F      +    
Sbjct: 138 PVIVCGDMNVAHEEIDLKNPKTNHHNAGFSDEEREKMTILLNNGFTDTFRYLYPEQV-TY 196

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++       L        ++            SDHCP+ 
Sbjct: 197 SWWSYRFKAREKNTGWRIDYFLISNRLRDRLKDAKIHTEIF-----------GSDHCPVE 245

Query: 300 IDY 302
           +  
Sbjct: 246 LTL 248


>gi|160884274|ref|ZP_02065277.1| hypothetical protein BACOVA_02252 [Bacteroides ovatus ATCC 8483]
 gi|156110013|gb|EDO11758.1| hypothetical protein BACOVA_02252 [Bacteroides ovatus ATCC 8483]
          Length = 253

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L       L                ++    + DI+ LQE          
Sbjct: 1   MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +                +    ++ +A+  K        +   G          R
Sbjct: 38  LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKQEP----DHVEYGMGMEAYDNEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D  +       +      +  + ++ + ++S  
Sbjct: 94  F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMAWLEDFQKYVMELQKSRP 141

Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD+N                         +   + +             + +   
Sbjct: 142 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDSFRTLCPEKQEYT 201

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R           IDY ++ +     L +        +           SDHCP+++
Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 250

Query: 301 DY 302
           + 
Sbjct: 251 EI 252


>gi|110680975|ref|YP_683982.1| hypothetical protein RD1_3833 [Roseobacter denitrificans OCh 114]
 gi|109457091|gb|ABG33296.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 227

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 78/281 (27%), Gaps = 61/281 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82
           +++ S+NI            K        D   +      +DAD+V LQE          
Sbjct: 1   MKIASYNIR-----------KAVGLDWRRDPDRVADVLLEIDADVVVLQEADRRTGTRAG 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V P                 +  S+     AI +R +      +   L            
Sbjct: 50  VLPLERLEDELGYLLPDFSVRALSHGWHGNAILLRSRYDSHAARRIDLPSID-------P 102

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV + +     +I  + + L                     +Q   L+  +    +  
Sbjct: 103 RGAVSVQISDPCVEIIGVHLGLTPG---------------TRRKQVDVLRQVLQ---DRP 144

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P ++AGDFN         +   K +D                 +    R +  +D FV+
Sbjct: 145 HPVILAGDFN---------EWNLKRLDFGTDAQVVSPGL-----SFHAARPRAALDRFVL 190

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  ++     +             R SDH PI I  D
Sbjct: 191 GPG--VRVVSSHVHKSNL--------AARASDHLPIVITVD 221


>gi|329955242|ref|ZP_08296199.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
 gi|328526241|gb|EGF53260.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
          Length = 370

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 78/305 (25%), Gaps = 72/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSYN 78
           + + ++N++               + T      + +Y +    D++  QE       + +
Sbjct: 114 LTVATYNVHNFG-----------NEITGYSCKEIARYMRQQHVDVLCFQEFGGNKHFTAD 162

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           ++ +      + +  + +                   +R      +   YPL G +    
Sbjct: 163 SLRRALSHWQYALIPADDS------------------IRGLLPIAVFSRYPLTGGRFITY 204

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------NTYSPSCSLLSQQAQW 190
              +  ++   +      I +L+ HL++     + +        +        +   A+ 
Sbjct: 205 PHSSNCSMLCDIVAGTDTIRLLNNHLQTTGVSRNRKKWERELTTDNTRREAQAVQDAAET 264

Query: 191 LKD-----------WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           L +                  +  P ++ GDFN   +                    F  
Sbjct: 265 LHENFVKRAAQTDSICHLAIAAPHPVLVCGDFNSLPSSYTYRRL------SGFLEDGFKT 318

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                    +  +  + IDY                       D         SDH P+ 
Sbjct: 319 GGHGYMYTYRYGKRMLRIDYAFHSPELEC-------------IDYYSPDLDLCSDHNPVI 365

Query: 300 IDYDF 304
               +
Sbjct: 366 FTVKY 370


>gi|320104403|ref|YP_004179994.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
 gi|319751685|gb|ADV63445.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
          Length = 356

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/358 (13%), Positives = 90/358 (25%), Gaps = 79/358 (22%)

Query: 2   IRKYVLALVFFLVPCTASV---------------AQKVRLVSWNINTLSEQEGVSLWKNS 46
           +   +L+  F  V                      + +R+V+WN + L   + V      
Sbjct: 19  MACLILSGFFAAVASVPPAQARQEAVPPQTQPAVGRPIRIVTWNCDALFTTDEVK----- 73

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC-----IFYSTERLINH 101
             R  SD+         +  D++ LQE+ S   +  V     W         +     N 
Sbjct: 74  --RRKSDF---INMVAEVQPDVILLQEVTSQAVLEAVRDVIGWTKADGSPADAVCSSFNP 128

Query: 102 SKRDSNNDIHTAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRA 145
                 N +   +  R   V                 V+++   +    +       R  
Sbjct: 129 DHTQEYNSLEVGVISRFPIVEAVEFDTELDNPPSERQVVERQLTIPSRLNPPPNFRGRGF 188

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           + +        + + ++HLKS       ++  +         A  L     +        
Sbjct: 189 LRVRTSSPD--LVLYNVHLKSSRGQFGRQDVNNAIQREYVMGALALDAAAIRVAFPNHDV 246

Query: 206 VIAGDFN------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---------- 249
           +I GDFN       K+      +   +     D            C              
Sbjct: 247 IIGGDFNVGITDRDKLANSWEVEAARRKGQAYDRTHALLTGLIDGCRFRPLCEGVGETYV 306

Query: 250 ----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +    ID   +D                       +R    SDH P+  ++ 
Sbjct: 307 KGANRFKGAGAIDNLYVDGPHRDRFRPA-----------KPARSSYGSDHLPVWTEFT 353


>gi|37993822|gb|AAR06990.1| sphingomyelinase [Bacillus cereus W]
 gi|37993843|gb|AAR07004.1| sphingomyelinase [Bacillus anthracis]
 gi|37993846|gb|AAR07006.1| sphingomyelinase [Bacillus anthracis]
 gi|37993848|gb|AAR07007.1| sphingomyelinase [Bacillus anthracis]
          Length = 252

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +  GD N        N        +KT+  
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHA 247


>gi|76808611|ref|YP_333756.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710b]
 gi|237812555|ref|YP_002897006.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei MSHR346]
 gi|254179545|ref|ZP_04886144.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei 1655]
 gi|254189064|ref|ZP_04895575.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei Pasteur 52237]
 gi|76578064|gb|ABA47539.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei 1710b]
 gi|157936743|gb|EDO92413.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei Pasteur 52237]
 gi|184210085|gb|EDU07128.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei 1655]
 gi|237503102|gb|ACQ95420.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei MSHR346]
          Length = 286

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 52/308 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+SWN+    +  G           T D       A+ L D D++  QE+        
Sbjct: 1   MRLISWNVQWGRDANG-----------TVDLARTVDAARGLGDFDVLCAQELTRGFHALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              S +  A++         +    +                A+  +        + L  
Sbjct: 50  GGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              + + +  R A+E+ +      + V+  HL+ +            +   L ++A    
Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------ 237
                 +    PF         ++ GDFN                D    +  +      
Sbjct: 168 RASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPG 227

Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             P       +  +     +  D+  +     + L +                  R SDH
Sbjct: 228 KTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASDH 276

Query: 296 CPISIDYD 303
            PI ++  
Sbjct: 277 QPIVLELS 284


>gi|308209127|gb|ADO20908.1| exodeoxyribonuclease-2 [Saccharopolyspora spinosa]
          Length = 266

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 76/303 (25%), Gaps = 62/303 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ SWN+N                   +    L  +    + D++ +QE+         
Sbjct: 1   MRIASWNVN----------------SVGARLPKLLDWLGTAEPDVLCVQELKCAADA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + +            +AV  +      +   L         A   
Sbjct: 42  -------FPFDEVGELGYKVAAHGTGRWNGVAVLSRVGIDEVRHGLLDEPGFQVDGAMFE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +      Y        +    L+  + ++  +  
Sbjct: 95  TQEPRAIGATCGGVRVWSVYVPNGREVGHPHYAYK------LRWLDALRATVIEEMAADR 148

Query: 204 PFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCN----------ANK 249
           PF + GDFN         D         +  N+        K                  
Sbjct: 149 PFAVLGDFNICPTDADVWDIAGFADSTHVRKNEGKALAALAKPGLARVYRRAMKYDIPFT 208

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +         + ID    ++     +            D    +GK  SDH P+ +
Sbjct: 209 YWDYRALRFPNNQGMRIDLVYGNEKFTGAVTDSYV-------DREARKGKGTSDHAPVVV 261

Query: 301 DYD 303
           D D
Sbjct: 262 DLD 264


>gi|315498086|ref|YP_004086890.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
 gi|315416098|gb|ADU12739.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
          Length = 351

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/350 (13%), Positives = 107/350 (30%), Gaps = 63/350 (18%)

Query: 5   YVLALVFFLVPCTASVAQK----VRLVSWNINTLS--------EQEGVSLWKNSVKRTTS 52
           ++L+ +F LV    + AQ     + ++++N+                 +   N+    ++
Sbjct: 8   WLLSGLFSLVVAGGAAAQTADPRLTVMTYNVENFFDAEDDPRMPNGSSNEVVNTPAWVSA 67

Query: 53  DYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV---FPKNTWCIFYSTERLINHSKRD 105
             T + +  +  D     D++ L E+ S  ++  +             +     + ++  
Sbjct: 68  KATNVARVIERFDFGRGPDVLVLTEVESQASLEAIKGALNNTGAAYVTAVLLDADPNRPA 127

Query: 106 SNNDIH-TAIAVRKKNVR---VLQQSYPLLGAKDSFSRAG------NRRAVELLV-EING 154
              D     +A+  K         +S+P+   + S  ++        R  +++ +   +G
Sbjct: 128 PKPDQRGIKVALLSKLPLANGFTPKSFPVDLTRTSDCKSRDGSAGTTRDLLQVDLALPDG 187

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           K + +   HL S                +  + A      +  K       + AGDFN  
Sbjct: 188 KTLTIFGGHLPSGGNP-----------RICREIAAQTIATLATKLPQSHVILAAGDFNFN 236

Query: 215 --INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRN-------------KIPID 258
              +        +        L    +   S+     K                    ID
Sbjct: 237 CAPDERKGLAAAFTGWVLPAQLDNACRGNGSQFYGREKTWSYLDVITQKASGASQAWAID 296

Query: 259 -----YFVMDQNAYKFLIQESF-SEILYNEDDIKSRGKRLSDHCPISIDY 302
                  + D    ++  ++       +  +    +G   SDH PI+ID 
Sbjct: 297 PKSFRTVLTDNEQLQWDDRDQVMRPKAFRFNAETGKGSGTSDHWPIAIDL 346


>gi|229086305|ref|ZP_04218483.1| Exodeoxyribonuclease [Bacillus cereus Rock3-44]
 gi|228697000|gb|EEL49807.1| Exodeoxyribonuclease [Bacillus cereus Rock3-44]
          Length = 252

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 80/301 (26%), Gaps = 77/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L        +               +Y +  D DI  LQE+   +    +
Sbjct: 1   MKFISWNVNGLRAVIAKGGF--------------IEYLEETDTDIFCLQEIKLQSGQVDL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +             +    ++  A+  K   +       +   D   R    
Sbjct: 47  NPEGYYVYW-----------NYAVKKGYSGTAILTKKEPLSVTYGLGIEEHDQEGRL--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++L ++  +        +        +      L        +   
Sbjct: 93  ------ITLEFEDFYMLTLYTPNAKRGLERLDYRMKWEEDILSYITKL--------DKKK 138

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +       +  I     +  +      R  A 
Sbjct: 139 PVIFCGDLNVAHKEIDLKNPKTNRKNPGFSDQERKRFTQILDEGFIDTYRYLYPDREGAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYF++ +     ++    +  +             SDHCP+ 
Sbjct: 199 SWWSYRMNARAKNIGWRLDYFIVSERLKDKIVDAKINSEV-----------MGSDHCPVE 247

Query: 300 I 300
           +
Sbjct: 248 L 248


>gi|73670688|ref|YP_306703.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina barkeri
           str. Fusaro]
 gi|72397850|gb|AAZ72123.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina barkeri
           str. Fusaro]
          Length = 258

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 74/311 (23%), Gaps = 81/311 (26%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78
           +    L+SWN+N L                        +       DIV +QE  +    
Sbjct: 2   SGNYNLISWNVNGLRAVMKKGF---------------LELLLEQKFDIVCIQETKVSPDK 46

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              +      +  ++ +     +S           +  +KK +++        G      
Sbjct: 47  LPREAKNIPGYYNYFVSAEKNGYSG--------VGLFSKKKPLKLE------TGMGIEKF 92

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R      +  + +   +++I+  +                      +   D+    
Sbjct: 93  DKEGRF-----LRADFEDFTLMNIYFPNG-------KASLERLEYKMSFYEAFLDYANSL 140

Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           K      VI GD N                             K +      +   +  +
Sbjct: 141 KAEGKRLVICGDVNTAHKELDLARPKQNETISGFLPEERAWMDKFL--AAGYLDTFRMFN 198

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           +DYF + +     +                      S
Sbjct: 199 PEGGNYSWWSMRTGARKRNVGWRLDYFFVSEKLRDNVKSAPI-----------YSEIMGS 247

Query: 294 DHCPISIDYDF 304
           DHCP+ ++ +F
Sbjct: 248 DHCPVGLELEF 258


>gi|223935760|ref|ZP_03627676.1| exodeoxyribonuclease III Xth [bacterium Ellin514]
 gi|223895768|gb|EEF62213.1| exodeoxyribonuclease III Xth [bacterium Ellin514]
          Length = 250

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 78/303 (25%), Gaps = 76/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +    D DI+ LQE        + 
Sbjct: 1   MKLISWNVNGLRAVLKKNF---------------LDFLAKEDPDILCLQETKCTPDDVEQ 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               T+  +++T +   +          +  A+  K   +           D   R    
Sbjct: 46  LWPATFTTYWNTAQKKGY----------SGTAIFTKAKPISVSLGINCPEHDMEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++     + +++++++ +     +                + L+           
Sbjct: 92  -----VLTSEYPEFFLVNVYVPNSKRELTRLAYRQQWDCDFLSYLKKLEK--------KK 138

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
           P +  GD N     +   +      +                   I   +E +       
Sbjct: 139 PVIFCGDLNVAHTEIDLANPKANVKNHGFTPEERAGFSTVIKAGFIDTFREFEKGGGHYS 198

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDYF++       L +                    SDHCP+ I
Sbjct: 199 WWSPMGGARSRNVGWRIDYFLISSALRPRLKRAFIQ-----------PNIPGSDHCPVGI 247

Query: 301 DYD 303
           +  
Sbjct: 248 ELS 250


>gi|167034007|ref|YP_001669238.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1]
 gi|166860495|gb|ABY98902.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1]
          Length = 265

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 76/304 (25%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +++ ++NIN                   S    L  + +    DI  LQE        
Sbjct: 2   KALKIATFNING----------------IRSRLPALLAWLEREQPDIACLQE-------- 37

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                              +            +A+  ++   L+    L G +D      
Sbjct: 38  --LKAANQQFPREAIEAAGYGCLYQGQPSWNGVAILARDSEPLEVRRGLPGMQDDQQSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV  ++        V  ++L +       +  Y        +  + L         S
Sbjct: 96  LEAAVHGVL--------VGCLYLPNGNPQPGPKFDYK------LRWFECLIKHAQTLHVS 141

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+AGDFN     L                     ++ +     +         +  
Sbjct: 142 RHPTVLAGDFNVVPTDLDIYSPRSWLKDALLQPESRACFEALLAQGWVDAVRHLYPEQRI 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ +++     +L            D       + SDH P+
Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLNPGLSPYLKGAGV-------DAWVRNEAKASDHAPV 254

Query: 299 SIDY 302
            I  
Sbjct: 255 WIQL 258


>gi|83941780|ref|ZP_00954242.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. EE-36]
 gi|83847600|gb|EAP85475.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. EE-36]
          Length = 262

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/306 (9%), Positives = 67/306 (21%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       ++ +       D++ LQE  S      
Sbjct: 2   PFTLATWNIN----------------SVRLREPIVLKLLAEHGPDVLCLQECKSPVDK-- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +                +  +A+  +   V            +      
Sbjct: 44  -------IPTAAFIEAGYTHMVARGQKGYNGVAILSRLPLVDAGDQDFATLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +   +E     + V + ++ +    D  +   +            ++DW    K   
Sbjct: 93  ---IAAKLENG---VTVHNFYVPAG--GDVPDREVNEKFGQKLDYLADMRDWFHGDKPEK 144

Query: 203 VPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GD N         D               +           +   ++   + N 
Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEKLAETQDAGGFVDVTRQDIPQGNL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                        ++ SDH P
Sbjct: 203 YSWWSYRAKDWDAADKGRRLDHVWATPDISGAAHSS-------RVLRDARGWEKPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|302533764|ref|ZP_07286106.1| large secreted protein [Streptomyces sp. C]
 gi|302442659|gb|EFL14475.1| large secreted protein [Streptomyces sp. C]
          Length = 613

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 84/331 (25%), Gaps = 69/331 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A    ++ + ++N+  L   +    + N  K   ++             DIV L+E+   
Sbjct: 304 AQSPGELAVATYNVENLDPSDPQEKFDNLAKAVVTNLA---------SPDIVALEEIQDD 354

Query: 78  NAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           N                     K      +    S     N    +   +I         
Sbjct: 355 NGAKNDGTVSAEQTLTKFTEAIKAAGGPAYQW-RSIAPENNKDGGEPGGNIRQVFLFNPA 413

Query: 120 NVRVLQQS---------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
            V    ++                      P      + + A +R+ +       G+ ++
Sbjct: 414 RVSFTDRAAGDAVTATGVTTERGKAALTHSPGRIDPANPAWADSRKPLAGEFLFRGRTVF 473

Query: 159 VLDIHLKSFCFLD----SLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFN 212
           V+  H  S    +      +     S      QAQ +  ++ Q    +     +  GD N
Sbjct: 474 VIANHFGSKGGDEGLTSHHQPPVRKSEEKRLLQAQAVNGFVKQLLAVDKNAAVLAVGDIN 533

Query: 213 RKINYLGNNDDFWKTIDPND-SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                        K ++              +   +     N   +D  +   +   F  
Sbjct: 534 DF-----EFSGTAKALEDGGALYSAIKSLPKAERYSYVYQGNAQVLDQILTSPSIKNFAY 588

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   ++  +        SDH P  + +
Sbjct: 589 DSVHINAEFSAQN--------SDHDPQVLRF 611


>gi|187933475|ref|YP_001885926.1| exodeoxyribonuclease III [Clostridium botulinum B str. Eklund 17B]
 gi|187721628|gb|ACD22849.1| exodeoxyribonuclease III [Clostridium botulinum B str. Eklund 17B]
          Length = 251

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 80/300 (26%), Gaps = 78/300 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L                           K  +ADI  +QE         + 
Sbjct: 3   KLISWNVNGLRACVKKGF---------------IDILKESNADIFCVQESKLQEGQIDLN 47

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +  +  +             +    ++  AV  K   +       LG          R 
Sbjct: 48  LEGYYDYW-----------NYAEKKGYSGTAVFSKEKPLNIS----LGIGIEEHDKEGR- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +  ++ ++++++  +     +  +      +        L            P
Sbjct: 92  ----VLTLEFEEFYLVNVYTPNSQQKLARIDYRMAWENDFRSYLNELNK--------AKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GD N                         + +  +  +  +  +      +  A  
Sbjct: 140 VIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKFGELLKSGFIDTYRYFYPDKEGAYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ ++    L+       +             SDHCP+ +
Sbjct: 200 WWSYRFNARANNAGWRIDYFLVSKDFEDRLVDAKIHTQI-----------EGSDHCPVEL 248


>gi|82776137|ref|YP_402484.1| hypothetical protein SDY_0813 [Shigella dysenteriae Sd197]
 gi|309786554|ref|ZP_07681177.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           dysenteriae 1617]
 gi|81240285|gb|ABB60995.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308925617|gb|EFP71101.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           dysenteriae 1617]
          Length = 253

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ NI+                        LR   + + ADIV  QE+   + V  
Sbjct: 9   SFKVLTINIHKGFTAFNRRF----------ILPELRDAVRTVSADIVCQQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              A  R  +   +     GK I V+ +HL                 +    Q   L +W
Sbjct: 114 VDGAEKRGVLYCRIVPPMTGKAIHVMCVHLALR-------------EAHRQAQLAMLAEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P ++AGDFN       +       +D       F +               
Sbjct: 161 VNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +   +                       + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 251


>gi|168036056|ref|XP_001770524.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678232|gb|EDQ64693.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 363

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 89/304 (29%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+L+SWN+N L         ++           + + A   D D++ LQE      + + 
Sbjct: 97  VKLLSWNVNGLRALLKEKGAEHEQGSM------IARLAAREDFDVLCLQETK----LQEK 146

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      ++   ++     ++   ++  A+  +   +  Q    +   D   R    
Sbjct: 147 DVADIRKSLLASHE-VSLWGCSTSKLGYSGTAIISRIKPISVQYGLGIPNHDQEGRL--- 202

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSL-ENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 +       + +  ++ +                  LS   + L+          
Sbjct: 203 ------ITCEFDTFYFVVSYVPNSGAKLERLAYRTQEWDVALSSHLRELEK--------K 248

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N     +  ND                 +KT   +   +   +++     A
Sbjct: 249 KPVILTGDLNCAHEDIDINDPAGNRKSAGFTDEERESFKTNFLDHGFVDTFRKQHPNAVA 308

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           +DYF++  +  + +            D         SDHCPI
Sbjct: 309 YTYWGYRTASRPKNKGWRLDYFLVSGSLSENVH-----------DSYTIPDVGGSDHCPI 357

Query: 299 SIDY 302
           ++  
Sbjct: 358 ALIL 361


>gi|145355749|ref|XP_001422113.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582353|gb|ABP00430.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 273

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/301 (10%), Positives = 76/301 (25%), Gaps = 60/301 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +VSWN+N L         ++ +K+       L    +  DAD++ LQE          
Sbjct: 1   LSVVSWNVNGL---------RSLLKKAPRALDELA---RRTDADVLVLQETKLGADGRGA 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSRAGN 142
                    +  E         +    ++  A+  ++    + +                
Sbjct: 49  VDGEGEAPKFLREYGTREYATSTARKGYSGTAMFIRDGDWAKMKRVEATRLSAGGFDDEG 108

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     ++       +V++ ++ +                 +    + +++ +   +   
Sbjct: 109 R-----VLTAELDSCFVVNAYVPNSGAD------LKRLPERVEVWERAIREHVRALESRG 157

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              +  GD N                               +     L+   +       
Sbjct: 158 KAVIYCGDLNVAHEEIDLWGRHAENSKSAGFTPEERAAMTRLLEECDLVDTFRAHRPDAR 217

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A      +           +DY +  +     ++           D         SDHCP
Sbjct: 218 AFTYWSYRAGAREKNRGWRLDYILASRRLADSIV-----------DAYALPDVLGSDHCP 266

Query: 298 I 298
           +
Sbjct: 267 V 267


>gi|257867352|ref|ZP_05647005.1| exodeoxyribonuclease [Enterococcus casseliflavus EC30]
 gi|257873685|ref|ZP_05653338.1| exodeoxyribonuclease [Enterococcus casseliflavus EC10]
 gi|257801408|gb|EEV30338.1| exodeoxyribonuclease [Enterococcus casseliflavus EC30]
 gi|257807849|gb|EEV36671.1| exodeoxyribonuclease [Enterococcus casseliflavus EC10]
          Length = 252

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 81/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +  + LDAD   LQE          
Sbjct: 1   MKFISWNVNGLRAIVKKNF---------------SEVFEALDADFFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +  +    +   D+  R    
Sbjct: 45  LDLPGYHQYWNYAEKKGY----------SGTAIFAKEPALSVRYGLGIEEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +                           ++  + +   
Sbjct: 91  -----VITLEYPEFFLITCYTPN-------SQNELRRLDYRMTWEDAFLAYL-TELKQQK 137

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +   +                 + T+        F           
Sbjct: 138 PVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREKFSTLLAAGFTDTFRYFYPDAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+  +  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSDDLNESLLDAKIHTDII-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +D ++
Sbjct: 247 LDLNY 251


>gi|228930104|ref|ZP_04093114.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228829603|gb|EEM75230.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 337

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 105/322 (32%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 35  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 94

Query: 71  LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+            +  + K  P            + +              ++   K
Sbjct: 95  LQEVDIKSMRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 154

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 155 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 204

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P   +  
Sbjct: 205 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLVEL 264

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 265 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 322

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 323 EN----------SDHNPVSAVF 334


>gi|239813032|ref|YP_002941942.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110]
 gi|239799609|gb|ACS16676.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110]
          Length = 242

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 76/256 (29%), Gaps = 38/256 (14%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFY----STERLINHSKRDSN 107
              LR   + + AD+VFLQE+   ++    KV        +     +      + +    
Sbjct: 18  LPELRDAVRTVGADVVFLQEVLGTHSRHSRKVNNWPEAPHYEFLADTMWPQFAYGRNAVY 77

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
              H   AV  K   V  +++ +  A         R  +  ++ + G+ + V  I     
Sbjct: 78  PRGHHGNAVLSKFPIVHFRNHDVSVAG-----PEKRGLLHCVLRLPGRTVDVHAICAHLG 132

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                       + +   QQ + L   +  +  +  P ++AGDFN               
Sbjct: 133 L-----------AEAHRQQQLELLLHIVRDEVPADAPLIVAGDFND-----WRGRAHQVL 176

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +       F     S           +P+D   +               +       + 
Sbjct: 177 EEGAALREVFVHANGSAAKTFPARFPLLPLDRIYVRNAG-----------VHAPVVLPRK 225

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P+  + D
Sbjct: 226 PWSHLSDHAPLVANID 241


>gi|289666147|ref|ZP_06487728.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289670759|ref|ZP_06491834.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 259

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 86/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+      D+V +QE  +  +    
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLTAFAPDVVGIQETKLEDHKFPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +   +                 +  +A+  ++  +  Q+         F    
Sbjct: 45  AALAELGYRSVFC------------GQKTYNGVAILSRSPALDVQT-----GIPGFDDVQ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +      DWI Q+ ++
Sbjct: 88  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQQLQT 136

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246
               V+ GDFN   +    +D         +   D            L    +       
Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALEKLLALGLHDAFRLHPQAAE 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        ++          D      +R SDH P
Sbjct: 197 QFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249

Query: 298 ISIDY 302
             +  
Sbjct: 250 AWVRL 254


>gi|319640027|ref|ZP_07994754.1| hypothetical protein HMPREF9011_00351 [Bacteroides sp. 3_1_40A]
 gi|317388305|gb|EFV69157.1| hypothetical protein HMPREF9011_00351 [Bacteroides sp. 3_1_40A]
          Length = 276

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 83/309 (26%), Gaps = 71/309 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +L L   L+  +A     +RL+++NI   +  + V            D+  +    
Sbjct: 30  MKKTLLLLFTLLLALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 78

Query: 62  KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            ++  ++V LQE+ S          + ++  +     +++             +     I
Sbjct: 79  NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 130

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  K + V  ++  L G      R   R  +    +                   +   
Sbjct: 131 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 177

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                           L+           PF +AGD N +                    
Sbjct: 178 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 214

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             F    D   +          IDY    +   K     S   +              SD
Sbjct: 215 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 265

Query: 295 HCPISIDYD 303
           H P+ +  +
Sbjct: 266 HRPLVVVLE 274


>gi|310824891|ref|YP_003957249.1| endonuclease/exonuclease/phosphatase family protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309397963|gb|ADO75422.1| Endonuclease/exonuclease/phosphatase family protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 323

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 91/325 (28%), Gaps = 60/325 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN-- 78
            +R+VS+N+                KR       +      LD   D+V LQE+ + +  
Sbjct: 5   PLRIVSYNVRYFGHALRGLASTQGPKR------RVSAALAALDPLPDVVCLQEVETSSFR 58

Query: 79  ---AVAKVFPKNTWC------------------IFYSTERLINHSKRDSNNDIHTAIAVR 117
              A  +  P  T                     + +     +H K    +   T +A+ 
Sbjct: 59  SSVAERRKVPGETQLQAFMGRMEEIFAAQGREMPYDAFYFRAHHYKLGDFSLYTTGLAIL 118

Query: 118 KKNVRVLQQSYPLLGAKDSFS--------RAGNRRAVELLV--EINGKKIWVLDIHLKSF 167
                +    + +                R  +R    + +    +G+   V + HL   
Sbjct: 119 VNRRTLRVDRHNVDEPSQITHHHVQRLKERKQSRICAHMRLLRTSDGRPFHVFNTHLSLP 178

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                              Q    +  +    +     PFV+ GDFN            +
Sbjct: 179 TPFAREFWATKDKMGCGVNQLHEARKLVALLTEHAQGEPFVVTGDFNSPPASP-----VF 233

Query: 226 KTIDPNDSLIRFP----KEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEI 278
           + +     L        +   S             ++ +D+ +   +  ++L      E 
Sbjct: 234 RYLCEEAQLTCAQAIVGQINPSAIRGFPTAGFMHLRMHLDH-LFSGSGVRWLD----MEE 288

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
                D+ SR   LSDH P+   + 
Sbjct: 289 TRPFGDVGSRFHGLSDHMPLIARFT 313


>gi|300715934|ref|YP_003740737.1| conserved uncharacterized protein YbhP [Erwinia billingiae Eb661]
 gi|299061770|emb|CAX58886.1| conserved uncharacterized protein YbhP [Erwinia billingiae Eb661]
          Length = 253

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 82/290 (28%), Gaps = 49/290 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    +++++ N +                        LR   +   ADIVFLQE+    
Sbjct: 5   AQGFSLKVLTINTHKGFAAFNRRF----------ILPELRDAVRATAADIVFLQEVMGAP 54

Query: 79  AVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           A+ ++    +P      F +     +++        + H   A+  +   +         
Sbjct: 55  AINQLKVENWPDTPHYEFLADTMWNDYAYGRNAVYPEGHHGNAILSRYPIL-----KFEN 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              S      R  +   V I   +  +  I +                 +    Q + L 
Sbjct: 110 RDISVEGTEKRGLLHCQVAIPSHEQPLHAICVHLGLKD-----------AHRHAQLKLLC 158

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + +     +  P V+AGDFN               ++       F ++            
Sbjct: 159 ELVNS-LPADAPVVVAGDFNDWQQKANAVLKKGAALEE-----VFSRKFGRPARTFPARF 212

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + +D   +               I + +         LSDH P++++ 
Sbjct: 213 PLLRLDRIYVRNAG-----------ISHPQTIPLRPWSHLSDHAPLAVEI 251


>gi|163734662|ref|ZP_02142101.1| hypothetical protein RLO149_14583 [Roseobacter litoralis Och 149]
 gi|161392155|gb|EDQ16485.1| hypothetical protein RLO149_14583 [Roseobacter litoralis Och 149]
          Length = 227

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 76/282 (26%), Gaps = 61/282 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82
           +++ S+NI            K        D   +      +DAD+V LQE          
Sbjct: 1   MKIASYNIR-----------KAVGLDWRRDPERVADVLLEIDADVVVLQEADRRTGTRAG 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V P                 +  S+      I +R        +   L            
Sbjct: 50  VLPIERLESELGYLLPDFSIRALSHGWHGNTILLRSHYDSHAARRIDLPSID-------P 102

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV + +     +I  + + L                     +Q   L+  +       
Sbjct: 103 RGAVSVQIADPCVEIIGVHLGLTPG---------------TRRKQVDVLRQVLQ---GQT 144

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P ++AGDFN         +   K +D                 +    R +  +D FV+
Sbjct: 145 HPVILAGDFN---------EWNLKRLDFGSDAQIVSPGL-----SFHAARPRAALDLFVL 190

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  ++               +   R SDH PI I  DF
Sbjct: 191 GPGL--RVVSSHVH--------KSTLAVRASDHLPIVITVDF 222


>gi|160900734|ref|YP_001566316.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1]
 gi|160366318|gb|ABX37931.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1]
          Length = 289

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 80/299 (26%), Gaps = 36/299 (12%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           +++WN       +G    +            +       D D++ LQE+  +    +  P
Sbjct: 4   ILTWNTQWCLGLDGRMDPERI----------VAHALSMADIDVLCLQEIAVHYPGLQGAP 53

Query: 86  KNTWCIFYSTERLINHSKRDSN-------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +      +           +                V  +   +    + L    D   
Sbjct: 54  GDQVEQVRAALPEGWKVFFGAAVDEFTAVGRQRFGNLVATRLPVLQLAHHRLPYPHDGGV 113

Query: 139 RAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--- 194
           R+  R      V +     + V+  HL+ F    S     + + +L S Q + L      
Sbjct: 114 RSMPRCCTAATVMDAALGPVRVMSTHLEYF----SRRQRMAQALALRSLQIEALGQAEAP 169

Query: 195 --------ITQKKESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSR 244
                     Q K      V+ GDFN + +          W   +             S 
Sbjct: 170 PQPASDGSPQQTKPHTPHAVLCGDFNFEPHEDEYAGLSRPWAAGEEGALTAGQWHNSWSV 229

Query: 245 CNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + ++       + D     +         S S   +          RLSDH P+ +  
Sbjct: 230 LHPDQPQPPTFRLFDRQWGPEPGACDFAWVSDSLRGHVRGWAVDSDTRLSDHQPVLLQL 288


>gi|312961228|ref|ZP_07775733.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
 gi|311284886|gb|EFQ63462.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
          Length = 264

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +++ ++N+N L                 +    + Q+      DIV LQE+    ++ 
Sbjct: 2   KALKIATFNLNGL----------------RARLPNVLQWLAREQPDIVCLQELKLPQSL- 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                      Y+      +            +A+  ++ + L+      G     S   
Sbjct: 45  ---------FPYADFEAAGYGAICLGQASWNGVAILARDAQPLESR---RGLPGDDSDNQ 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R     +       + V  ++L +       +  Y  +        + L D+    + S
Sbjct: 93  SRYIEAAV-----HGVLVGCLYLPNGNPQPGPKFDYKLA------WFERLIDYAGALQAS 141

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++AGDFN     L                     ++ +                  
Sbjct: 142 EHPVLLAGDFNVVPTDLDIYNPRSWLKDALLQPESRACYQRLLAQGWTDALRHLYPDERV 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ +++     +L            D         SDH P 
Sbjct: 202 YTFWDYFRQHWQKNSGLRIDHLLLNPALTPYLKDAGV-------DAWVRNEPHASDHAPT 254

Query: 299 SIDY 302
            I  
Sbjct: 255 WIQL 258


>gi|298387677|ref|ZP_06997228.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           1_1_14]
 gi|298259533|gb|EFI02406.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           1_1_14]
          Length = 372

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 86/299 (28%), Gaps = 68/299 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++N+N+ + +                   +  Y K L  DI   QE      +   
Sbjct: 116 LTIATYNVNSFNHEHTGFSC-----------KQIAAYMKELGVDIFCFQEF----GINHE 160

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F  ++     S      +       +    ++V  +     +Q      + +        
Sbjct: 161 FGIDSLRTVLSEWPYY-YVPSSPAGESLLQLSVFSRYPIKEKQLVTYPNSNNCS------ 213

Query: 144 RAVELLVEINGKKIWVLDIHLKSF-------------CFLDSLENTY---------SPSC 181
             +   ++IN + I + + HL++                 D+                + 
Sbjct: 214 --LWCDIDINDQTIRLFNNHLQTTEVSRNKRKLEKELRADDTDRAERAALTLADGLHENF 271

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
              + QA+ +   I+    S  P ++ GDFN   +         + ++       F    
Sbjct: 272 KKRAAQAEHINQLISA---SPYPTLVCGDFNSLPSSYVYQTVKGEKLNDG-----FQTCG 323

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                  +  ++ + IDY +                  +   D  S     SDH P+ +
Sbjct: 324 HGYMYTFRYFKHLLRIDYILHSSE--------------FQGVDYFSPDLEYSDHNPVVM 368


>gi|260642288|ref|ZP_05415267.2| exodeoxyribonuclease III [Bacteroides finegoldii DSM 17565]
 gi|260622802|gb|EEX45673.1| exodeoxyribonuclease III [Bacteroides finegoldii DSM 17565]
          Length = 255

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 82/303 (27%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L                        ++    + DI+ LQE          
Sbjct: 2   MKIITYNVNGLRAAVSKGFP---------------EWLAQENPDILCLQETK-------- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +                +    ++ +A+  K        +   G          R
Sbjct: 39  LQPDQYPAEVFEALGYKSYLYSAQKKGYSGVAILTKQEP----DHVEYGMGIEAYDNEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D  +       +      +  + ++T+ +++  
Sbjct: 95  F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVTELRKTRP 142

Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD+N                         +   + +             + +   
Sbjct: 143 NLILCGDYNICHEPIDIHDPVRNAKNSGFLPEEREWMTRFLSAGFIDSFRLLYPEKQEYT 202

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R           IDY +  +   ++L          +           SDHCP+ +
Sbjct: 203 WWSYRFNSRAKNKGWRIDYCMTSEPVRRWLKSARILNEAVH-----------SDHCPMVL 251

Query: 301 DYD 303
           + D
Sbjct: 252 EID 254


>gi|161830200|ref|YP_001596787.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 331]
 gi|161762067|gb|ABX77709.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 331]
          Length = 255

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 89/294 (30%), Gaps = 51/294 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                     ++S+NI+                        +R+  + +DADIV LQE+ 
Sbjct: 3   SLTPKRDAFTVLSYNIHKGFSARYRRFV----------LPDIREALRAIDADIVLLQEVQ 52

Query: 76  SYNAVAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             +  +++             I  S      + +       H   A+       + ++  
Sbjct: 53  GKHHKSRLKKFAHADLPQTEFIAESKWPHYMYGRNAVYGSAHHGNALLSNFPFKMVENIN 112

Query: 130 LLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           +     S S+  +R  +  +++     ++ V+ IHL  F              +    Q 
Sbjct: 113 V-----SLSQRASRSILHAIIDYEPTVELHVICIHLGLF-------------RAERDYQL 154

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L   I     S  P +IAGDFN      G  +   K ++  +       +        
Sbjct: 155 ITLSKRIEAHVPSHAPLIIAGDFNDW--RRGAFNYMEKELELKEVYKVLEGKH---AKTY 209

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              R  + +D           L+        Y         K+LSDH P+   +
Sbjct: 210 PASRPTLEVDRIYYRG---LKLLSGEIFNENY--------WKKLSDHLPLHAKF 252


>gi|37993825|gb|AAR06992.1| sphingomyelinase [Bacillus cereus]
          Length = 252

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 81/230 (35%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +  GD N K      N        +KT+  
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVKKINAENNSDSEYASMFKTLHA 247


>gi|167906917|ref|ZP_02494122.1| Metal-dependent hydrolase [Burkholderia pseudomallei NCTC 13177]
          Length = 296

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 74/286 (25%), Gaps = 56/286 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
                +++R+ ++NI+                 T      +      L AD++ LQE+  
Sbjct: 4   AQPRTRELRIATYNIHG-----------GLGAWTAGAAERIAVVLDELRADVIALQEVPL 52

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A           +   T                   AV  +      +   L     S
Sbjct: 53  GGARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----S 104

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F     R A++  +E     + V+  HL               S +  S Q   L   + 
Sbjct: 105 FGNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LA 148

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N         + F +       +  F +    R            
Sbjct: 149 AFDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS-- 197

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +     ++L+  +                   DH P+    
Sbjct: 198 LDRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 233


>gi|218906273|ref|YP_002454107.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820]
 gi|218538717|gb|ACK91115.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820]
          Length = 352

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+            +  + K  P            + +              ++   K
Sbjct: 110 LQEVDIKSMRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P+  +  
Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 279

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 338 EN----------SDHNPVSAVF 349


>gi|325970995|ref|YP_004247186.1| exodeoxyribonuclease III Xth [Spirochaeta sp. Buddy]
 gi|324026233|gb|ADY12992.1| exodeoxyribonuclease III Xth [Spirochaeta sp. Buddy]
          Length = 250

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 79/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L   +                    +Y K  +ADI  LQE         +
Sbjct: 1   MKLVSWNVNGLRAIQKKGFD---------------EYLKQSNADIFCLQETKLQEDQISL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  ++S           +    ++  A+  K   V  Q        +        
Sbjct: 46  VTE-GYHTYWS----------FAEKKGYSGTALFSKQEPVSVQRGIGHPLDNEGR----- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V    ++ +V+  +  +     +  +T              L            
Sbjct: 90  -----TVTAEFEQFYVVCCYTPNSQEALARLDTRMDWDEAFRSYVCSLASM--------K 136

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD N     +                   + + ++     +  F     +R    
Sbjct: 137 PVIICGDLNVAHQSIDLRHPKANERNAGYSIEERNQFTSLLDAGFIDTFRYLYPNREGIY 196

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY+++ +   + ++  +                + SDH P+ 
Sbjct: 197 SWWSYRFKARENNAGWRIDYWLVSEELRQSILDSTI-----------DTETQGSDHAPVI 245

Query: 300 IDYD 303
           +  +
Sbjct: 246 LYLN 249


>gi|167763762|ref|ZP_02435889.1| hypothetical protein BACSTE_02142 [Bacteroides stercoris ATCC
           43183]
 gi|167697878|gb|EDS14457.1| hypothetical protein BACSTE_02142 [Bacteroides stercoris ATCC
           43183]
          Length = 374

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 92/312 (29%), Gaps = 64/312 (20%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
                T      ++L+S+NI      +G                 +  Y K  +ADI+ L
Sbjct: 98  LNFHTTELPEGSIKLLSYNIMGF---DGAYKKDGKNP--------ILTYLKESNADILCL 146

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE  S  +   +  K+              +   S N     IA   K   +  +     
Sbjct: 147 QEYASDESPRHLTQKDI-ERELKDYPYRRINVVGSGNGYTNRIACYSKFPILSARVLDYA 205

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------------- 178
            + +         +V   +++N   I +++ HL+S     + ++ Y              
Sbjct: 206 SSYN--------GSVLYELKLNEDTITLINNHLESNKLTKADKDIYEEILKAPETEKVKS 257

Query: 179 ----------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                      + ++ + QA  +   I          ++ GDFN        +    + +
Sbjct: 258 GARLLLHKLAEASAIRAPQADTIAREIA--SSRHPSVIVCGDFNDTPISYA-HRVIAQNL 314

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
           D       F +       +    +    ID  ++ +N   +             +    R
Sbjct: 315 DD-----AFTQSGRGLGISYNQNKFYFRIDNILISKNLRSY-------------NCTVDR 356

Query: 289 GKRLSDHCPISI 300
             R SDH PI  
Sbjct: 357 SIRESDHYPIWC 368


>gi|153009147|ref|YP_001370362.1| endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC
           49188]
 gi|151561035|gb|ABS14533.1| Endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC
           49188]
          Length = 369

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/366 (12%), Positives = 95/366 (25%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSL----------------WKNSVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S                    +  R       +          
Sbjct: 2   FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEINDEAQYRLLEQARAVAHADDTRQMT 61

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 62  ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGHGFRHKYLIDGNDSRGIDVAVMMR 121

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        SY  +   D                 R   R  + L + I GK I
Sbjct: 122 DTTRDGQPIEVDEVTSYAYVTYNDFGLYEPVLGELGLEPHDRIFKRDCLNLDIRIAGKPI 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES----LVPFVIAGDFNR 213
            +   HLKS     +  +  + S  +   +A+ ++  I  K          ++I GDFN 
Sbjct: 182 SLFVTHLKSMTGARNGFDGRTASLPVRRAEARAMRRIIEDKFGPSNVADRRWLICGDFND 241

Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +               +  
Sbjct: 242 YRERIIIGGDEWNGYQFTPMVEEESALDVLLADGFAVNLVERRPVMDRWTLYHTRGPQER 301

Query: 257 ----IDYFVMDQNAYKFLIQESFSEILY---------------NEDDIKSRGKRLSDHCP 297
               +DY +   +  K   +   + I                           + SDHCP
Sbjct: 302 HLCQLDYIMASPSFAKKNEKAVPNIIRRGQPWRTIFPPDQQIERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           +++  +
Sbjct: 362 VAVTLN 367


>gi|269218059|ref|ZP_06161913.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269212994|gb|EEZ79334.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 263

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 74/300 (24%), Gaps = 59/300 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   + +       +  D D++ LQE          
Sbjct: 1   MRIATWNIN----------------SIRARHERALAVLERWDLDVLLLQETKCRPD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +       D    +A+  +                    A  +
Sbjct: 41  ------QFPAAEFEAAGYEVAAHGLDQWNGVAILSRVGIEEVTVGFEGQPAFGKEGAEPK 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   LD     Y        ++A          ++S  
Sbjct: 95  VEARA-IGARCGGVGVWSLYVPNGRALDDPHYPYKLEFLAALRRAAG----AQLAEDSSA 149

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++AGD+N   +                     + +                ++     
Sbjct: 150 QLLLAGDWNVVPSDADVWDPELFRGELYASDPEREAFHAFADAGFAEVTRGATEAPYTFW 209

Query: 249 KNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              R +      + ID+          +            D  + +GK  SDH P+ ++ 
Sbjct: 210 DYQRLRFPKNEGMRIDFAWASPALAGRVAAAHI-------DRNERKGKGASDHVPVVVEL 262


>gi|241888975|ref|ZP_04776279.1| exodeoxyribonuclease III [Gemella haemolysans ATCC 10379]
 gi|241864224|gb|EER68602.1| exodeoxyribonuclease III [Gemella haemolysans ATCC 10379]
          Length = 254

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+N+N L    G +  ++                K LDAD   LQE     A    
Sbjct: 1   MKCISFNVNGLRAIVGKNFEED---------------FKQLDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++           +    ++  A+  K+  +       +   D+  R    
Sbjct: 45  LQFDGYYSYFN----------YAERKGYSGTAIYTKHEPLNVTYGIGIEEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   K + + ++  +                        L            
Sbjct: 91  -----VITLEYDKFFFITVYTPNSGSELKRLEYRMSWEEDFKNYLLALNK--------TK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                         + +  +     +  F         A 
Sbjct: 138 GVVVCGDLNVAHTEIDLKNPKSNMKNAGFTPEEREKFTKLLDAGFIDTFRYYNPDLTGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++  ++L   +    ++            SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSRDLEEYLESAAIHNEIF-----------GSDHCPVE 246

Query: 300 IDY 302
           +  
Sbjct: 247 LVL 249


>gi|311742697|ref|ZP_07716506.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272]
 gi|311314325|gb|EFQ84233.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272]
          Length = 274

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 92/305 (30%), Gaps = 63/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-AK 82
           +R+ + N+N           + +  ++    + L ++    DAD+V LQE+ + +A+  +
Sbjct: 5   LRIATVNVNG---------VRAAWNKSRGQTSGLAEWLAGRDADVVTLQEVRAPDALVRE 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     + + ++           +       +AV  +   V  +    +G  D+F     
Sbjct: 56  LLAGTGYHVAHTE----------AAAKGRAGVAVLSRVEPVAVR----VGNGDAFFDDSG 101

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     +   +G  + V+  ++ S       ++           +   +         S 
Sbjct: 102 RWIEADVPLADGSVLTVVSAYVHSGEAGTPRQDEKYRFLERTGARMAEI-------SASG 154

Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GD N         +                 F +  D    +    +       
Sbjct: 155 THGLLTGDLNVAHTPRDIRNAKGNLKKAGFLPEERAHFDRWFDELGWVDVPRRLAGDVDG 214

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+ +   +        +        D  +S  +R SDH P
Sbjct: 215 PYTWWSMRGQAFDNDTGWRIDHQIATPDLATAATTAAV-------DRAESWAERWSDHAP 267

Query: 298 ISIDY 302
           + +DY
Sbjct: 268 LVVDY 272


>gi|229187318|ref|ZP_04314462.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
 gi|228596169|gb|EEK53845.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
          Length = 337

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 107/327 (32%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 35  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 94

Query: 71  LQEMG----------SYNAVAKVFPKN------TWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE+            +  + K  P         +   +    + N             +
Sbjct: 95  LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 149

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N GK + ++++HL +     
Sbjct: 150 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA----- 204

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P 
Sbjct: 205 -----YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPE 259

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 260 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 317

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 318 KDLKFEN----------SDHNPVSAVF 334


>gi|170079433|ref|YP_001736071.1| sphingomyelinase-c (sphingomyelin phosphodiesterase) [Synechococcus
           sp. PCC 7002]
 gi|169887102|gb|ACB00816.1| sphingomyelinase-c (Sphingomyelin phosphodiesterase) [Synechococcus
           sp. PCC 7002]
          Length = 301

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 40/306 (13%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNA 79
           ++   ++++N+  LS             R       +    +N +  D++ + E     A
Sbjct: 14  SKSFSILNYNVMLLSRNIPGQGNLMQNYRAQE----IATAIRNSNPWDVIVINEAFDNEA 69

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +        ++S   +++     +N  +       + +  ++     +      F  
Sbjct: 70  RNNLSRSLKEAGYFSATEVVDM----NNGKLEDGGVYLQSHWPIMATDQIIFSDCSGFDC 125

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198
             N+ AV   +   G    +   HL++           + +  + + Q + L+ +I QK 
Sbjct: 126 QSNKGAVYAKINKEGIIYHIFGTHLQA----------DTENSGVRANQLRQLETFINQKT 175

Query: 199 ---KESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRFPKEKDSRCNANKNL 251
              +      +IAGD N        ++       + +        F    +         
Sbjct: 176 GGAQARREAIIIAGDLNFNYQTAEYDNALETLNAQFLGNIPQGYTFDPRMNDLAKYRYPN 235

Query: 252 RNKIPIDYFVMDQNAYK---------FLIQESFSEILYNEDDIKSRG----KRLSDHCPI 298
                +DY ++   + +              S  E+    D +   G    + LSDH  +
Sbjct: 236 DPSEWLDYVLVSNESIQPNRTTLDLTKFRTASQYELPGKGDFLNLFGGTMVRDLSDHYGL 295

Query: 299 SIDYDF 304
           S  Y F
Sbjct: 296 SATYLF 301


>gi|146298980|ref|YP_001193571.1| hypothetical protein Fjoh_1220 [Flavobacterium johnsoniae UW101]
 gi|146153398|gb|ABQ04252.1| hypothetical protein Fjoh_1220 [Flavobacterium johnsoniae UW101]
          Length = 363

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/360 (8%), Positives = 93/360 (25%), Gaps = 64/360 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVS---WNINTLSEQEGVSLWKN-----------S 46
           M R +   L+ F +  + + ++K  + +   +N   L +    +   +           +
Sbjct: 1   MRRIFSFYLILFCLFNSNAQSKKYSIHTAAFYNFENLFDIYDDASTNDDEWTPTGAQHWT 60

Query: 47  VKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKV------FPKNTWCIFY 93
            ++       L +    +          ++   E+ +   +  +         +   I +
Sbjct: 61  KEKYEQKLKNLSRVISEIGKPENSNAPTLIGCSEVENRGVLEDLIKEEKIADYDYGIIHF 120

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK------------DSFSRAG 141
            +               +           ++ ++ P+                D+ +R  
Sbjct: 121 DSPDQRGIDVALLYQKKYFRPTSYSNIPLLIYKNKPVTQETNNEDLGDVEIKIDTKNRVF 180

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  + +   +  ++I ++  H  S    +   + +  +   L+++       I    + 
Sbjct: 181 TRDQLLITGFLENEEIHIIVNHWPSRSGGEKASSPFREAAGRLNRKIIDSLQQINPMAK- 239

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPND-----SLIRFPKEKDSRCNANKNLRNKIP 256
               +  GD N          +        D         F +  +          +   
Sbjct: 240 ---VITMGDLNDGPFNKSVKIELGAKAKKADVPEFGVYNPFEEMAERGLGTIAFRDSWDI 296

Query: 257 IDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRGKRL----------SDHCPISI 300
            D  +M ++  +         +       Y                      SDH P+ I
Sbjct: 297 FDQIIMTKSFIEPDFSNFKFWKAGIFNRSYLIQASGKYKGYPLRNTLTEAGFSDHFPVYI 356


>gi|225159347|ref|ZP_03725644.1| DNA-(apurinic or apyrimidinic site) lyase [Opitutaceae bacterium
           TAV2]
 gi|224802053|gb|EEG20328.1| DNA-(apurinic or apyrimidinic site) lyase [Opitutaceae bacterium
           TAV2]
          Length = 259

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 71/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++LVSWN+N +                      L  Y     AD + LQE       V  
Sbjct: 1   MKLVSWNVNGVRAVLQKG---------------LLDYIAASGADAICLQETKCQPGDVQH 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V     +   ++  +   +S       +         +  +   +      +D     G 
Sbjct: 46  VEWPAGYTAHWNAAQKRGYSGTAIFTRMGAG-----SSPALTPLAVTAGIGRDEHDTEGR 100

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++       ++++ ++ +     +         +      + L+        + 
Sbjct: 101 ------VLTAEFPDFYLVNAYVPNAQPELARLPYRQRWDADFLAYLRGLE--------TR 146

Query: 203 VPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P V+ GD N                   +       ++       L  F + +    + 
Sbjct: 147 KPVVMCGDLNVAHEEIDLARPKENVGNPGFSNEERAGFREFLRAGFLDTFREFEKGPGH- 205

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYF+   +    L +                    SDHCPI
Sbjct: 206 YSWWSYRAGARGKNVGWRIDYFLASASLRPRLKRAWIE-----------PAVMGSDHCPI 254

Query: 299 SIDY 302
            ++ 
Sbjct: 255 GLEL 258


>gi|154484298|ref|ZP_02026746.1| hypothetical protein EUBVEN_02011 [Eubacterium ventriosum ATCC
           27560]
 gi|149734775|gb|EDM50692.1| hypothetical protein EUBVEN_02011 [Eubacterium ventriosum ATCC
           27560]
          Length = 251

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 78/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                         +   +DADI  +QE        ++
Sbjct: 1   MKLISWNVNGIRACVTKGFM---------------DFFNEIDADIFCIQESKMQEGQLEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +             +    ++  A+  K   +  +    +   D   R    
Sbjct: 46  EMPGYYQYW-----------NYAEKKGYSGTAIFTKKEPMDVKYGIGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++  +  +        +             + L++          
Sbjct: 91  -----VITLEFEDFYMVTCYTPNSQNELKRLDYRMQWEDDFKAYLKKLEE--------SK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                         +    +  +  +  F           
Sbjct: 138 PVVLCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKMTKLLDDGFIDTFRYFYPDLEGKY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ +     L        +             SDHCPI 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFIVSEALKDKLEGADIHTEIL-----------GSDHCPIE 246

Query: 300 IDYD 303
           +D +
Sbjct: 247 LDLN 250


>gi|37993804|gb|AAR06978.1| sphingomyelinase [Bacillus cereus]
          Length = 252

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 83/230 (36%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTSEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + I V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +I GD N                 +KT++ 
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNA 247


>gi|299146132|ref|ZP_07039200.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_23]
 gi|298516623|gb|EFI40504.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_23]
          Length = 253

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 82/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L       L                ++    + DI+ LQE          
Sbjct: 1   MKIITYNVNGLRAAVSKGLP---------------EWLAQENPDILCLQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +                +    ++ +A+  K        +   G          R
Sbjct: 38  LQPDQYPGEVFEALGYKSYLYSAQKKGYSGVAILTKQEP----DHVEYGMGMEAYDNEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D  +       +      +  + ++ + ++S  
Sbjct: 94  F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVMELQKSRP 141

Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD+N                         +   + +             + +   
Sbjct: 142 NLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGYVDAFRTLCPEKQEYT 201

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R           IDY ++ +     L +        +           SDHCP+++
Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAYILNEAVH-----------SDHCPMAL 250

Query: 301 DY 302
           + 
Sbjct: 251 EI 252


>gi|192361651|ref|YP_001982212.1| exonuclease III [Cellvibrio japonicus Ueda107]
 gi|190687816|gb|ACE85494.1| exodeoxyribonuclease III [Cellvibrio japonicus Ueda107]
          Length = 269

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/311 (10%), Positives = 80/311 (25%), Gaps = 75/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+N+N                   +    L     N + D + LQE    +     
Sbjct: 1   MKAISFNVN----------------SIRTRMHQLEAVVNNHNPDFIGLQETKVND----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        + + +         H  +A+  ++         ++    + S    R
Sbjct: 40  -----PDFPLEAIQSLGYHIEFFGQKTHYGVAILSRHPFK-----KVIKGFRTDSDDAQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +  + +    ++ +L+       F       +       ++    L  ++T++ +   
Sbjct: 90  RFIGGVFDTPIGEVTLLN-----GYFPQGESRDHPIKFPGKAKFYADLLQYLTEEYQPQQ 144

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++L    ++   +        + +   
Sbjct: 145 QLIVMGDMNISHQDIDIGIGEENRKRWLRTGKCSFLPEEREWLDKLLAWGLQDTYRELNP 204

Query: 243 SRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                      +             ID  +         I           D      ++
Sbjct: 205 DSNEKFSWFDYRSGGFEDNPKRGLRIDLILATNPLINKCIDTGI-------DYDIRGMEK 257

Query: 292 LSDHCPISIDY 302
            SDHCPI   +
Sbjct: 258 PSDHCPIWASF 268


>gi|94313832|ref|YP_587041.1| exodeoxyribonuclease III [Cupriavidus metallidurans CH34]
 gi|93357684|gb|ABF11772.1| Exodeoxyribonuclease III [Cupriavidus metallidurans CH34]
          Length = 283

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  + +    D+  LQE+    AV + 
Sbjct: 4   LKIATFNING----------------IHARLPSLLAWLEREQPDVACLQEL---KAVDES 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP               +            +A+  K    ++    L G     +   +R
Sbjct: 45  FPVAELHA-------AGYGAVWQGQKSWNGVAILAKGSDPVEVRRGLPGDA---ADTQSR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + V  ++L +       +  Y  +        + L    +    S  
Sbjct: 95  YIEAAV-----AGVLVACLYLPNGNPQPGPKFEYKLA------WFERLIRHASTLYASGH 143

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+AGDFN         +                 + + ++   +     +  D+R   
Sbjct: 144 PVVLAGDFNVVPTDDDIYNPRSWLKDALLQPASRECYRQLLEQGWTDALRTRYPDTRIYT 203

Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 +          ID+ ++ ++  + +            D         SDH P  
Sbjct: 204 F-WDYFRQHWQKDSGLRIDHLLLSRSLAQHMRDAGV-------DKWVRGEPHASDHAPAW 255

Query: 300 IDYD 303
           ++ +
Sbjct: 256 VEIE 259


>gi|326797545|ref|YP_004315364.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326548309|gb|ADZ76694.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 348

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 76/282 (26%), Gaps = 61/282 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++S+NI           +         D +   +  K    D+V LQE+ S    +   
Sbjct: 126 RIMSYNI-----------FIGKGMDEVIDLSRSARIIKEYKPDLVALQEVDSIAERSGWV 174

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +       +    I        +     IAV  K   +     PL G +        R 
Sbjct: 175 DQPKELGRLTGMNYIFAP-ATPRSKGKYGIAVLTKEKPLAYHYMPLPGQE------EPRT 227

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            + +      +     ++HL       SL          +  +A  L            P
Sbjct: 228 LLIVEF----QDYIFCNVHL-------SLNIDSRRQSIPIINEALKLY---------TKP 267

Query: 205 FVIAGDFNRKINYLGNND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            ++AGDFN            + W+ +                     +      +DY   
Sbjct: 268 IILAGDFNSLPVNDDIIKIQETWQYLSD------------PSLKTMPSNDPIWTLDYIWG 315

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +         +   I              SDH P+ +D +F
Sbjct: 316 YKANGHAYKVSNTKVIEEKT---------ASDHLPVYVDVEF 348


>gi|16119275|ref|NP_395981.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58]
 gi|15161781|gb|AAK90422.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58]
          Length = 258

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 81/303 (26%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L ++N+N ++                    +L ++      D+V LQE+ + N     
Sbjct: 1   MKLATYNVNGING----------------RLEVLLRWLAEAKPDVVCLQELKAPND---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  ++    +    L G  D        
Sbjct: 41  ------KFPRREIERAGYGAIWRGQKSWNGVAILARDQEPRETRRGLPGDPDDSHSRYIE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+          I +  ++L +       +  Y        +  + L  +  +  E  V
Sbjct: 95  AAI--------DGIVIGCLYLPNGNPAPGPKFDYK------LRWFERLYSYAAELFELDV 140

Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P  + GDFN     L            +   +                 +          
Sbjct: 141 PVALVGDFNVMPTDLDVYKPERWRDDALFRPEVRAAYAELIAMGWTDAVRLLHPEERIYT 200

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +           + ID+F++  +  + L            D      +  SDH P+ I
Sbjct: 201 FWKYFRNAFARDAGLRIDHFLLSPSLRERLQTCGV-------DKFARAWEHTSDHAPVWI 253

Query: 301 DYD 303
           + D
Sbjct: 254 ELD 256


>gi|254382239|ref|ZP_04997600.1| exonuclease [Streptomyces sp. Mg1]
 gi|194341145|gb|EDX22111.1| exonuclease [Streptomyces sp. Mg1]
          Length = 261

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 80/303 (26%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N                  T+    L  + ++   D+V +QE          
Sbjct: 1   MRIATFNVN----------------SITARLPRLLAWLESSGTDVVCIQETKCSAE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   R + +    +       +A+  K       +  L G  D       R
Sbjct: 41  ------QFPHEQLRELGYEAAVNATGRWNGVALISKVGLEDVVTG-LPGGPDYEGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + +  +++ +   ++     Y        +  + L   + +      
Sbjct: 94  A-----ISATCGGVRLWSVYVPNGREVEHDHYGYK------LEWFRALTAAVAEDAAGPR 142

Query: 204 PFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKDSRC-------------NANK 249
           PF + GD+N         D   ++ +       R   E                      
Sbjct: 143 PFAVLGDYNVAPTDEDVFDPAVFEGLTHVTPAERAALEALRAAGLSDVVPRPLKYDRPYT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID    ++   K              D  + +GK  SDH P+ +
Sbjct: 203 YWDYRQLAFPKNRGMRIDLVYGNEAFAKA-------VTDAYVDREERKGKGASDHAPVVV 255

Query: 301 DYD 303
           D  
Sbjct: 256 DLS 258


>gi|324998398|ref|ZP_08119510.1| exodeoxyribonuclease III Xth [Pseudonocardia sp. P1]
          Length = 287

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 72/296 (24%), Gaps = 49/296 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   S    L  +    D D+V LQE        K+
Sbjct: 1   MRLATWNVN----------------SAKSRLPRLLPWLDERDPDVVCLQE-------TKL 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F        ++           +AV  +                S       
Sbjct: 38  SDDDFAATFDDELAARGYAVAHHGQGRWNGVAVLSRVGLDDVVRGLPGEPVFSEGGLDVP 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQ------AQWLKDWIT 196
            A  +     G  + V  +++ +          Y     + L  Q      A  +     
Sbjct: 98  DARAVTATCGG--LRVTSVYVPNGREPSDPHYAYKLRWLAALRDQVVAGDPATTVVAGDV 155

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254
               +         F+   +      +    +          +++            +  
Sbjct: 156 NIAPTDDDVWDRSQFDGATHVTPAEREALAGLVGAGLHDVL-RDRWPDERVFTYWDYRAG 214

Query: 255 -------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  + ID  +  ++                 D    +G+  SDH P+ +D D
Sbjct: 215 RFHQDQGMRIDLVLAGEDPAGRRAAVWV-------DRKARKGRSPSDHAPVVLDLD 263


>gi|315641336|ref|ZP_07896412.1| exodeoxyribonuclease III [Enterococcus italicus DSM 15952]
 gi|315482909|gb|EFU73429.1| exodeoxyribonuclease III [Enterococcus italicus DSM 15952]
          Length = 252

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 69/301 (22%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                      LDAD   LQE     A    
Sbjct: 1   MKLISWNVNGLRAVMKKNFM---------------DVFTQLDADFFCLQETK-LQAGQIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                             G          R
Sbjct: 45  MDLPGYTQYWNYAVKKGYSGTAIFAK--------------EPADNVFYGIGKEEHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +        +               L        +   
Sbjct: 91  -----VITLEYPQFYLVTCYTPNSQNELKRLDYRMEWEDDFVAYLDEL--------KKDR 137

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +   +                 +  +  +     F         A 
Sbjct: 138 PVIVCGDLNVAHQEIDLKNWKTNQKNAGFTNEERAKFTALLDHGYTDTFRHFYPELTGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++  +    L   S                  SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSNDLTSHLTSASIH-----------ADILGSDHCPVE 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|300704421|ref|YP_003746024.1| hypothetical protein RCFBP_20225 [Ralstonia solanacearum CFBP2957]
 gi|299072085|emb|CBJ43417.1| conserved protein of unknown function,
           endonuclease/exonuclease/phosphatase family [Ralstonia
           solanacearum CFBP2957]
          Length = 289

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 50/305 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84
           +++WNI      +G             D   +   A+ +   DI+ LQE+ S        
Sbjct: 5   ILTWNIQWGRGADG-----------RVDLPRMLAEARAMGPFDILCLQEVTSGFGNLPGR 53

Query: 85  PKNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           P +      +       +        + +         A+  +   +    + L     +
Sbjct: 54  PGDDQWRELAGTLGPAFTLIDGIALERHEGARIQRFGNAIATRLPVLHVARHALPCPA-A 112

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R A+E +V+     + V+  HL+ +     +    +     +    +       
Sbjct: 113 ACPTMPRMAIEAIVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRAAHPPTL 172

Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             + +  PF         VI GDFN K +                +L    +        
Sbjct: 173 GPEPADGPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGPAPQ 232

Query: 248 NKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                              D+ ++ +     + +   + +            + SDH P+
Sbjct: 233 PPTFGVHDRAGWTEPAYACDFMLISEPLKTRVARVEVNSVT-----------QASDHQPM 281

Query: 299 SIDYD 303
            ++ +
Sbjct: 282 LLELN 286


>gi|261332364|emb|CBH15359.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei gambiense
           DAL972]
          Length = 929

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 88/325 (27%), Gaps = 56/325 (17%)

Query: 12  FLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLD 65
                    ++    +R+V+WN+   S   G             T++ Y  L Q  + LD
Sbjct: 624 LAGSSANPASKEISTLRVVTWNVQ-FSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLD 682

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAIAVRKKN 120
           AD++ +QE+              WC + S +  +           S+      + +  + 
Sbjct: 683 ADVIGMQEVE-----------PAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRR 731

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              +  ++       S   +       ++    G  + V  +HL +             +
Sbjct: 732 SLCVTSTHHANVPAFSGHTSVMPEVTVVV--SEGVPVTVGSMHLLAPY--------NQNN 781

Query: 181 CSLLSQQAQWLKDWITQKKE---SLVPFVIAGDFNR-------KINYLGNNDDFWKTIDP 230
            S  + Q   L   +  +          ++ GDFN            +G  D +      
Sbjct: 782 ISNRTTQLDNLTKRLRTRPPINGKQAGLIVMGDFNDCAKNYFTFPPEMGFKDAWLLLHPD 841

Query: 231 NDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEIL------- 279
                +     D   N               D  +      + +  E             
Sbjct: 842 EGVSSKSGHTIDGDRNPYAAQIIEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGIT 901

Query: 280 --YNEDDIKSRGKRLSDHCPISIDY 302
              + D         SDH  + +++
Sbjct: 902 KQVDIDKDVPEYLYPSDHFGLLVEF 926


>gi|255534152|ref|YP_003094524.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366]
 gi|255347136|gb|ACU06462.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366]
          Length = 256

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 91/304 (29%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +      + +                + +  DAD++ +QE+       K 
Sbjct: 1   MKIISYNVNGIRSASTKNFFG---------------WLQATDADMICMQEV-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            P     I    E+L  H          ++ +A+  +       ++   G  + +     
Sbjct: 39  LPSQIPEIIALIEQLGYHHYWFPAEKKGYSGVAILTRIKP----NHVEYGCGEEWIDKEG 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +  +     ++ ++L S    D  +                L+  +       
Sbjct: 95  RI-----LRADFDDFSLMSVYLPSGSSGDERQVKKYEFMRFFEAYITALRKTL------- 142

Query: 203 VPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              +I+GD+N     +  ++                W  +  N   I   +  +   +  
Sbjct: 143 PNLIISGDYNICHTAIDIHNPKSNANSSGFLPEEREWMELFLNGGFIDTFRHFNKDPHHY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY +  Q     L + S      +           SDHCP+ 
Sbjct: 203 TWWSFRANSRAKNLGWRIDYHLATQAMLPKLKKVSILADAIH-----------SDHCPVL 251

Query: 300 IDYD 303
           ++ +
Sbjct: 252 LELN 255


>gi|154706938|ref|YP_001424522.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii Dugway 5J108-111]
 gi|165918872|ref|ZP_02218958.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 334]
 gi|154356224|gb|ABS77686.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii Dugway 5J108-111]
 gi|165917420|gb|EDR36024.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 334]
          Length = 255

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 90/294 (30%), Gaps = 51/294 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                     ++S+NI+                        +R+  + +DADIV LQE+ 
Sbjct: 3   SLTPKRDAFTVLSYNIHKGFSARYRRFV----------LPDIREALRAIDADIVLLQEVQ 52

Query: 76  SYNAVAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             +  +++             I  S      + K       H   A+       + ++  
Sbjct: 53  GKHRKSRLKKFAHADLPQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENIN 112

Query: 130 LLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           +     S S+  +R  +  +++     ++ V+ IHL  F              +    Q 
Sbjct: 113 V-----SLSQRASRSILHAIIDYEPTVELHVICIHLGLF-------------RAERDYQL 154

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L   I     S  P +IAGDFN      G  +   K ++  +       +        
Sbjct: 155 ITLSKRIEAHVPSHAPLIIAGDFNDW--RRGAFNYMEKELELKEVYKVLEGKH---AKTY 209

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              R  + +D           L   S           +S  K+LSDH P+   +
Sbjct: 210 PASRPTLEVDRIYYRG-----LKLLSGEIFN------ESYWKKLSDHLPLHAKF 252


>gi|29293904|gb|AAO63566.1| RNA editing complex protein MP99 [Trypanosoma brucei]
          Length = 907

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 88/325 (27%), Gaps = 56/325 (17%)

Query: 12  FLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLD 65
                    ++    +R+V+WN+   S   G             T++ Y  L Q  + LD
Sbjct: 602 LAGSSANPASKEISTLRVVTWNVQ-FSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLD 660

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAIAVRKKN 120
           AD++ +QE+              WC + S +  +           S+      + +  + 
Sbjct: 661 ADVIGMQEVE-----------PAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRR 709

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              +  ++       S   +       ++    G  + V  +HL +             +
Sbjct: 710 SLCVTSTHHANVPAFSGHTSVMPEVTVVV--SEGVPVTVGSMHLLAPY--------NQNN 759

Query: 181 CSLLSQQAQWLKDWITQKKE---SLVPFVIAGDFNR-------KINYLGNNDDFWKTIDP 230
            S  + Q   L   +  +          ++ GDFN            +G  D +      
Sbjct: 760 ISNRTTQLDNLTKRLRTRPPINGKQAGLIVMGDFNDCAKNYFTFPPEMGFKDAWLLLHPD 819

Query: 231 NDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEIL------- 279
                +     D   N               D  +      + +  E             
Sbjct: 820 EGVSSKSGHTIDGDRNPYAAQIIEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGIT 879

Query: 280 --YNEDDIKSRGKRLSDHCPISIDY 302
              + D         SDH  + +++
Sbjct: 880 KQVDIDKDVPEYLYPSDHFGLLVEF 904


>gi|71747102|ref|XP_822606.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei TREU927]
 gi|70832274|gb|EAN77778.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei]
          Length = 907

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 88/325 (27%), Gaps = 56/325 (17%)

Query: 12  FLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLD 65
                    ++    +R+V+WN+   S   G             T++ Y  L Q  + LD
Sbjct: 602 LAGSSANPASKEISTLRVVTWNVQ-FSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLD 660

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAIAVRKKN 120
           AD++ +QE+              WC + S +  +           S+      + +  + 
Sbjct: 661 ADVIGMQEVE-----------PAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRR 709

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              +  ++       S   +       ++    G  + V  +HL +             +
Sbjct: 710 SLCVTSTHHANVPAFSGHTSVMPEVTVVV--SEGVPVTVGSMHLLAPY--------NQNN 759

Query: 181 CSLLSQQAQWLKDWITQKKE---SLVPFVIAGDFNR-------KINYLGNNDDFWKTIDP 230
            S  + Q   L   +  +          ++ GDFN            +G  D +      
Sbjct: 760 ISNRTTQLDNLTKRLRTRPPINGKQAGLIVMGDFNDCAKNYFTFPPEMGFKDAWLLLHPD 819

Query: 231 NDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEIL------- 279
                +     D   N               D  +      + +  E             
Sbjct: 820 EGVSSKSGHTIDGDRNPYAAQIIEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGIT 879

Query: 280 --YNEDDIKSRGKRLSDHCPISIDY 302
              + D         SDH  + +++
Sbjct: 880 KQVDIDKDVPEYLYPSDHFGLLVEF 904


>gi|290961375|ref|YP_003492557.1| hydrolase [Streptomyces scabiei 87.22]
 gi|260650901|emb|CBG74018.1| putative secreted hydrolase [Streptomyces scabiei 87.22]
          Length = 607

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 90/328 (27%), Gaps = 68/328 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ + ++N+  L   +                  +  + ++   DIV L+E+   N   
Sbjct: 301 GELAVATYNVENLDPSDASFGD---------HAAAIVHHLQS--PDIVALEEIQDNNGAT 349

Query: 82  ------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
                             K      +    S + +      +   +I          V  
Sbjct: 350 NDGTVAADKTVKKLIDAIKAAGGPAYDW-RSIDPVNLADGGEPGGNIRQVFLFNPARVSF 408

Query: 124 LQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
             +                       P      + +   +R+ +       GK ++V+  
Sbjct: 409 TDRPGGDATTAVGVTKANGKARLTVSPGRIDPANAAWTNSRKPLVGEFSFRGKSVFVVAN 468

Query: 163 HLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKIN 216
           H  S     +L +        S +    QA+ +  ++ Q   K+     +  GD N    
Sbjct: 469 HFASKGGDQALHSEFQPPKRSSETQRHLQAKAVNTFVKQVLAKDKKASVIALGDINDF-- 526

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                 D  K ++    L    K    R   +     N   +D  ++ ++  +       
Sbjct: 527 ---EFSDTAKQLEDGGVLWSAIKSLPKRERYSYVFQGNAQVLDQILVSRSVRRATGF--- 580

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +         ++SDH P  + ++
Sbjct: 581 --TYDSVHINAEFNDQISDHDPQVVRFE 606


>gi|254518588|ref|ZP_05130644.1| exodeoxyribonuclease III Xth [Clostridium sp. 7_2_43FAA]
 gi|226912337|gb|EEH97538.1| exodeoxyribonuclease III Xth [Clostridium sp. 7_2_43FAA]
          Length = 251

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                        +Y K +DADI  +QE          
Sbjct: 1   MKLISWNVNGIRSCVTKGF---------------LEYFKEMDADIFCIQESKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELEGYHQYWNYAEKKGY----------SGTAIFTKEKPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +                         +D++    +   
Sbjct: 91  -----VITLEFENFYMVTVYTPN-------SKNELARLDYRMVWEDAFRDYLK-VLDEKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           +  +     +  F         A 
Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKTNLRNAGFTEEERSKFTELLNAGFVDTFRYFYPDEVGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++  +    L        +             SDHCP+ 
Sbjct: 198 SWWSYRFNARAKNAGWRIDYFLVSNSVKDKLEDAKIHSEVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 LKIN 250


>gi|149191611|ref|ZP_01869856.1| extracellular nuclease-related protein [Vibrio shilonii AK1]
 gi|148834569|gb|EDL51561.1| extracellular nuclease-related protein [Vibrio shilonii AK1]
          Length = 872

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/376 (13%), Positives = 100/376 (26%), Gaps = 97/376 (25%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73
           + +R+ ++N+ N  +   G    +    R  S++         +      LDADIV L E
Sbjct: 475 KDLRVATFNVLNYFTSPFGGDENRFGSNRGASNFAEFEVQQEKILNALIKLDADIVGLME 534

Query: 74  MGS-----YNAVAKVFPK---------NTWCIFYSTERLINHS---KRDSNNDIHTAIAV 116
           + +       A+A++  +           +                    ++ I T +  
Sbjct: 535 IENNGFGDNGAIAQLVRELNARIDNKKLHYDFVSVDSNQDGVIDKLDAVGSDAITTGVIY 594

Query: 117 RKKNVR------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162
           R K V+            V  +     G      +   R  +    ++ G  +K+ V   
Sbjct: 595 RPKQVKLKQVNVLEMPRQVAPEVLDDDGKVIEDGKNYQRNTLAPTFKVKGAKEKLTVAVN 654

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
           H KS                      +      +     A  L D +   K      V+ 
Sbjct: 655 HFKSKGSKCWEDAAPVAEGGQAGKDTDQQGSCENFRVAAAVALGDALEAIKGHK---VVL 711

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK--------------------------- 241
           GDFN              + +     IR  +                             
Sbjct: 712 GDFNAYGKEDPLLILTDYSQEKYGKTIRAARNTFIGEQEQFGDDGAVIDHSYGYVNVLGE 771

Query: 242 -DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------- 289
              +  +         +D+ ++  +  K ++  +   I   E  +               
Sbjct: 772 MHPQGWSYSYNDEVGALDHILISPSLSKRVVDATEWHINAAESTLFDYNDEYKGDLPKYQ 831

Query: 290 --KRLSDHCPISIDYD 303
              R SDH P  ID +
Sbjct: 832 DHYRSSDHDPAVIDLN 847


>gi|196032800|ref|ZP_03100213.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W]
 gi|195994229|gb|EDX58184.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W]
          Length = 352

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+            +  + K  P            + +              ++   K
Sbjct: 110 LQEVDIKSMRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P+  +  
Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 279

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 338 EN----------SDHNPVSAVF 349


>gi|149922986|ref|ZP_01911405.1| endonuclease/exonuclease/phosphatase family protein [Plesiocystis
           pacifica SIR-1]
 gi|149816172|gb|EDM75681.1| endonuclease/exonuclease/phosphatase family protein [Plesiocystis
           pacifica SIR-1]
          Length = 236

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 72/255 (28%), Gaps = 34/255 (13%)

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
             +   ++   +  +    +AD+  +QE  + +  +  F    +   +S    +  +   
Sbjct: 9   KPETLRANLRGIAAWIAEANADLACVQEADASSWWSGRFDHVAFLAQHSGLPYVTRACNV 68

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
               +    A+  +       ++       +F +      V   +   G      D+   
Sbjct: 69  DGGGLRYGTALLSRWPLEQAWAHTFAPTPPTFRKGF----VISSLRWPGAPELEFDVVSV 124

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
              F            S   +Q + L   I Q      P ++AGD N      G      
Sbjct: 125 HTDF---------ARASQRRRQVRELAALIRQ---RGRPVIVAGDLNSDWREGGATRLLA 172

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           + ++        P                  +D+ ++ +               +    +
Sbjct: 173 RDLELEAFEPTGPMV----TFPGPGPSPDRRLDWVLISKA--------------FEFSGV 214

Query: 286 KSRGKRLSDHCPISI 300
           ++   RLSDH P+  
Sbjct: 215 EAVDLRLSDHRPLLA 229


>gi|323141860|ref|ZP_08076721.1| exodeoxyribonuclease III [Phascolarctobacterium sp. YIT 12067]
 gi|322413607|gb|EFY04465.1| exodeoxyribonuclease III [Phascolarctobacterium sp. YIT 12067]
          Length = 236

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 71/270 (26%), Gaps = 64/270 (23%)

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
            ++ +    DI+ LQE       A       +  ++++     +          +  AV 
Sbjct: 6   AEFLQEAAPDIICLQETKMQREQADFV-FPGYEEYWNSAERKGY----------SGTAVF 54

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            K   +        G          R     ++ +     +++ ++  +     +  +  
Sbjct: 55  TKVKPLAVT----YGLGQEEHDKEGR-----VITLEFASFYLVTVYTPNSKDGLARLDYR 105

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNND 222
                +     Q L        ++  P V+ GD N               R   +     
Sbjct: 106 MVWEDVFRAYLQEL--------DAKKPVVVCGDLNVAAEEIDLKNPKTNRRNAGFTDEER 157

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273
             ++ +        F                +           IDYFV+       L   
Sbjct: 158 AKFRELKAAGFTDSFRYLHPEEVK-YSWWSYRFKAREKNAGWRIDYFVVSDRIADKLQSA 216

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ++            SDHCP+SI+ D
Sbjct: 217 EIHNEVF-----------GSDHCPVSIELD 235


>gi|225548156|ref|ZP_03769441.1| hypothetical protein RUMHYD_00135 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040687|gb|EEG50933.1| hypothetical protein RUMHYD_00135 [Blautia hydrogenotrophica DSM
           10507]
          Length = 251

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 85/306 (27%), Gaps = 82/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                        +Y +  +ADI  +QE        ++
Sbjct: 1   MKFISWNVNGIRACLKKGFE---------------EYFQEANADIFCIQETKCQEGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++++     +S                                    R    
Sbjct: 46  -TLPGYHQYWNSAVRKGYSGTAIFAK-----------------------------REPLS 75

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKES 201
            +  + +E + ++  V+ +  + F F+           + LS +  W +D++    K E 
Sbjct: 76  VSYGIGIEEHDQEGRVITLEYEDFYFVTVYTPNSQNELARLSYRMDWERDFLEYLTKLEE 135

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P V  GD N                           +  +  +  +  F      +  
Sbjct: 136 RKPVVWCGDLNVAHQEIDLKNPKTNRKNAGFTDEERACFTKVLESGFIDTFRYFYPDQEG 195

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF++  +  + ++       +             SDHCP
Sbjct: 196 IYSWWSYRFRAREKNAGWRIDYFLVSSSLREKMVDAKIHTQVL-----------GSDHCP 244

Query: 298 ISIDYD 303
           + +D  
Sbjct: 245 VELDIT 250


>gi|309389686|gb|ADO77566.1| exodeoxyribonuclease III Xth [Halanaerobium praevalens DSM 2228]
          Length = 258

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +R+ SWN+N +   +                     +  N   DI+ LQE+    +    
Sbjct: 1   MRIYSWNVNGIRAVKKKGF---------------LDWINNEQPDILGLQEIRIQDHQLKD 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   + +  +++                ++ +A+  K   +   S   +   D   R  
Sbjct: 46  DLRDLDNYYSYFN----------FGQKKGYSGVALYTKIEPLNVWSGIGIKRFDYEGR-- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++    +  ++L+I+  +         +     +        + D+    ++ 
Sbjct: 94  -------VIGAEFEDFYLLNIYFPNG-------RSSKKRLNYKLDFYDAILDYSENLRKK 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA------- 247
               VI GD+N   + +  +D         +  I+         K               
Sbjct: 140 GKEVVICGDYNTAHHPIDLHDPASNKKTSGFMPIEREWLDKLEEKGYLDSYRYFNPEKEC 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY  +       LI       +             SDHCP+
Sbjct: 200 YSWWSYRTKARSRNAGWRIDYHFVSAGLESKLINADILTEV-----------MGSDHCPV 248

Query: 299 SIDY 302
           +I  
Sbjct: 249 TITL 252


>gi|311112410|ref|YP_003983632.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931]
 gi|310943904|gb|ADP40198.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931]
          Length = 335

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/305 (8%), Positives = 73/305 (23%), Gaps = 66/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  +    + D++ LQE  + +     
Sbjct: 69  MKIATWNVN----------------SIRARADRIEDWLDKTEVDVLALQETKTKDE---- 108

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + +       +    +A+  +      +                 
Sbjct: 109 ------TFPFELFEFLGYEVAHYGLNQWNGVAIASRVGLDSVERT-FPNQPAFGKPGDPA 161

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201
                 +      + +  +++ +   L      Y        +  + L+  +      + 
Sbjct: 162 EIEARAIGATCNGVRIWSLYVPNGRGLTDPHMAYK------MEWMRQLRTNVNGWLHADP 215

Query: 202 LVPFVIAGDFNRKIN------------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243
              F + GD+N                           + F+  ++    +         
Sbjct: 216 AAQFALVGDWNVAPEDTDVWDIDFFRENDLTHVSAPEREAFYALLNDEGLVDPVRPYTQG 275

Query: 244 RCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                     +      + ID+ +        +            D  +  G   SDH P
Sbjct: 276 EYTYWDYQAGRFSKNEGMRIDFQLCSPALAARVENAWI-------DREEREGDGASDHTP 328

Query: 298 ISIDY 302
           + I+ 
Sbjct: 329 VVIEL 333


>gi|241949399|ref|XP_002417422.1| CCR4-NOT complex subunit, putative; carbon catabolite repressor
           protein 4, putative; cytoplasmic deadenylase, putative;
           glucose-repressible alcohol dehydrogenase
           transcriptional effector, putative [Candida dubliniensis
           CD36]
 gi|223640760|emb|CAX45074.1| CCR4-NOT complex subunit, putative [Candida dubliniensis CD36]
          Length = 784

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 87/327 (26%), Gaps = 42/327 (12%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +    ++S+N      +  +      +          LL++       DI+ +QE+ 
Sbjct: 447 PESSDNFTVLSYNTLCQHYATPKMYKFTPSWALDWDYRKNLLQKEVLGYSTDIICMQEVE 506

Query: 76  SYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--- 128
           +        P  T       F+S  R    ++ DS      A   +     ++ +     
Sbjct: 507 TKTFNEFWLPVMTANGYKGYFFSKTRSKTMNEADSKKVDGCATFFKNDKFSLVHKQNFEY 566

Query: 129 --------PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLEN 175
                        KD F+R  N+        L  + +G+KI V++ HL     F D    
Sbjct: 567 NSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKESGEKIAVVNTHLHWDPAFNDVKAL 626

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN--------------- 220
                   L    +  +   + +       ++ GDFN   +                   
Sbjct: 627 QVGILLEELQGIIKKYRHTNSNEDIKNSSIIVCGDFNSVKDSAVYQLFSTGASKGHEDMN 686

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVMD-QNAYKFLIQESF 275
             D+ K  +         K            N        IDY            +    
Sbjct: 687 GRDYGKFTEEGFHHPFKLKSAYETVGELPFTNLTPAFTDNIDYIWYSTPTLQVKGLLGRV 746

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            E   +           SDH PI   +
Sbjct: 747 DEEYTSHSIGFPDANFPSDHVPILAKF 773


>gi|170749328|ref|YP_001755588.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM
           2831]
 gi|170655850|gb|ACB24905.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM
           2831]
          Length = 264

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 85/302 (28%), Gaps = 64/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        L  + +    D+V LQE+   +     
Sbjct: 1   MRITTWNVN----------------SIKQRLPHLLGFLEEARPDVVCLQELKCQDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      ++        +  +A+  +    + +     G       A  R
Sbjct: 41  ------SFPRADIEAAGYAVETLGQKAYNGVALLVRAPLAMSK--IRRGLPGDADDAQAR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L+   + + + V  I+L +   +DS +  Y  +        + L+       E  +
Sbjct: 93  YIEALISGADTRPVRVASIYLPNGNPVDSPKYPYKLAF------LERLRLHARALLEDEI 146

Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+AGD+N                  +        F   +    +      +       
Sbjct: 147 AVVLAGDYNVIPEAADAADPEAWRSDALFLGTTRAAFRAILAEGYTDALRACDPRDGLYT 206

Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + +           ID+ ++   A   L+  S  +             + SDH P++ 
Sbjct: 207 FWDYQAGCWQRNAGIRIDHLLLSPQAGDRLVSASVQKH-------LRGLDKPSDHVPVTA 259

Query: 301 DY 302
           + 
Sbjct: 260 EL 261


>gi|307266821|ref|ZP_07548344.1| exodeoxyribonuclease III Xth [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918162|gb|EFN48413.1| exodeoxyribonuclease III Xth [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 257

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 84/304 (27%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L                         Y K ++ADI  +QE         +
Sbjct: 1   MKLVSWNVNGLRACLQKGFM---------------DYFKKVNADIFCIQETKLQPHQTDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N    +             +    ++  AV  K   +       +   D+  R    
Sbjct: 46  EELNLEGYYAFWN--------FAEKKAYSGTAVFTKYKPLSVNYGIGIPQHDNEGR---- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K ++++ +  +     +  +               L        +S+ 
Sbjct: 94  -----VITLEYEKFYLVNTYTPNSQRGLTRLSYRMEWEEDFRNYLLKL--------DSVK 140

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +  +  +  F      + +A 
Sbjct: 141 PIILCGDLNVAHKEIDIKNPSANRRNAGFTDEEREKMTMLLNSGFIDTFRYFYPHKKDAY 200

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ Q    +LI                     SDHCP+ 
Sbjct: 201 TWWSYMRNAREKNIGWRIDYFIVSQRLKDYLIDAEIH-----------SDVMGSDHCPVV 249

Query: 300 IDYD 303
           ++ D
Sbjct: 250 LEID 253


>gi|290960579|ref|YP_003491761.1| hydrolase [Streptomyces scabiei 87.22]
 gi|260650105|emb|CBG73221.1| putative hydrolase [Streptomyces scabiei 87.22]
          Length = 371

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 88/303 (29%), Gaps = 30/303 (9%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY-----TLLRQYAKNLDAD 67
           L   +      VR+V          +G S W    +    D          +    +DAD
Sbjct: 86  LYTVSPGAGPAVRIV---------AKGRSAWAGWAELVRDDIRWAAVENTARVIAEVDAD 136

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           I+   E+     + + F           +    +   D N+     + +  +      +S
Sbjct: 137 ILLTVEVEDRLTLDR-FNSQVLGGAIGHDPYPFNLLVDGNDSRGIDVGILSRFPVTSVRS 195

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           +             +R   E  VE++G+ +W+L  H KS  F  + +N            
Sbjct: 196 HIFDPGAGGKP-VFSRDCPEFEVEVSGEPLWILGNHFKSKGFGRAADNDRRRRAQAARV- 253

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
               ++            V+AGD N  +            +    +   +          
Sbjct: 254 ----REIYEAALTRSPRVVVAGDLNDSLASPPVRLLLDAGLSEAMTHESYGANPPGTHGT 309

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-------NEDDIKSRGKRLSDHCPISI 300
            K    K  +DY +     ++ +                 + D + S+  + SDH  +  
Sbjct: 310 GKRDEQK--LDYLLFGPELWERVTNVGVERRGIWAPRTFPSFDTVTSKADQASDHAALFA 367

Query: 301 DYD 303
           D D
Sbjct: 368 DLD 370


>gi|315497172|ref|YP_004085976.1| exodeoxyribonuclease iii xth [Asticcacaulis excentricus CB 48]
 gi|315415184|gb|ADU11825.1| exodeoxyribonuclease III Xth [Asticcacaulis excentricus CB 48]
          Length = 266

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 78/308 (25%), Gaps = 73/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + SWNIN                        + ++      DI+ LQE+   +     
Sbjct: 3   LSIASWNIN----------------SVRLRIDQVIRFLDMARPDILCLQEIKCQNGEFPR 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K F    +                +       +A+  K    + +  P          A 
Sbjct: 47  KAFEDAGYPHILV-----------TGQKGWHGVALVSKLPFEINEILPFC----RRGEAR 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +             I + + ++ +   +   +        L     + L   +  +   
Sbjct: 92  VQGIQVA-------GIDLWNFYIPAGGDVPDRQANDKFDHKLEFY--ERLTAHLKTR-NP 141

Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             P +IAGD N                   +     + F   +        F +      
Sbjct: 142 DAPLLIAGDLNIAPGENDVWSHRQMLKVVSHTPPELEAFADLMAAGGFHDAFRELWPEPQ 201

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+ +++      +     + I     D      R SDH
Sbjct: 202 KLFTWWSYRAADFRKSNRGLRLDHLLINPALKARITSPIAAVI----HDSVREWDRPSDH 257

Query: 296 CPISIDYD 303
            PI I++D
Sbjct: 258 APIQIEFD 265


>gi|224418520|ref|ZP_03656526.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
 gi|253826925|ref|ZP_04869810.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
 gi|313142047|ref|ZP_07804240.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
 gi|253510331|gb|EES88990.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
 gi|313131078|gb|EFR48695.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
          Length = 252

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 80/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         + + ++AD+  +QE          
Sbjct: 1   MKLISWNVNGLRACMNKGFM---------------DFFETVNADVFCIQE-SKMQREQAT 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  ++++     +          + +A+  K   +       +   D   R    
Sbjct: 45  FDFPNYEEYWNSAEKKGY----------SGVAIFSKTKPLSVAYDMGIAHHDKEGRI--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +    K  ++++++  +        +             + L+           
Sbjct: 92  ------ICAEYKDFYLVNVYTPNSKRELERLSYRMEWEDDFRAYLKNLEK--------TK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +  +     F     +   A 
Sbjct: 138 PVIVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREKMTQLLDSGFTDTFRHFYPTLEGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  +     L+       ++            SDHCP+ 
Sbjct: 198 SWWSYMGKARENNTGWRIDYFLCSKALDSKLLDAKIYPEVF-----------GSDHCPVG 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LEIN 250


>gi|115689672|ref|XP_796533.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Strongylocentrotus purpuratus]
 gi|115945120|ref|XP_001179947.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Strongylocentrotus purpuratus]
          Length = 365

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 86/295 (29%), Gaps = 41/295 (13%)

Query: 18  ASVAQKVRLVSWNINTLS---EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +   +VR+++WNI   +     +             +    + +     D D+V LQE+
Sbjct: 101 PARDARVRVMAWNILADALSMGADNFIKCPKESLLWDNRKYAIIEEILTYDPDVVCLQEV 160

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             Y              F    + + +S   +       + V     + +     ++   
Sbjct: 161 DHYE-----------DFFLPVLQQVGYSGAFNPKPDSPCLEVDYNGKKFVSNQVAVMHHL 209

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              S                ++  +   HLK+    +++           ++Q Q L + 
Sbjct: 210 KCISEKLL-----------DEEFCIATTHLKAKHGYETM----------RAKQGQHLIEV 248

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +     +P ++ GDFN +      +      ++   +  +  ++              
Sbjct: 249 LKKC-SKNLPLIVGGDFNAEPTEDVYSVYETSDLNLASAYKKLSEDGMQEPPYTTWKIRP 307

Query: 255 IP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  IDY    Q   + +    F        +        SDH  +  D+ F
Sbjct: 308 RREECHTIDYMWYTQEHLEPVALLRFPGEKEIGSERLPSWSYPSDHLSLVCDFVF 362


>gi|324515144|gb|ADY46104.1| Neutral sphingomyelinase [Ascaris suum]
          Length = 426

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 85/295 (28%), Gaps = 35/295 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N   L +      W    +      + L +   + + DI+ LQE+ S     ++
Sbjct: 15  LRVITLNCWALPQP-----WPVGSRDRQYRLSKLCEALLSTNYDIISLQEIWSVRDFDRI 69

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---RA 140
                           ++            I  R   V  L   Y L G           
Sbjct: 70  ------NSAIKDVYPYSYYFHSGFTGSGVCIFSRHAIVSTLMHRYSLNGFAHHIHRGDWF 123

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G +    + +EI   +I     HL +       +            QA  L  ++     
Sbjct: 124 GGKVVGMVQLEIGTYRINFYATHLHA-----EYDRENDLYLPHRLSQAFELSQFVKHTSH 178

Query: 201 SLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           +    ++ GDFN + + LG           D +    + +        ++   C   +NL
Sbjct: 179 AADLTILTGDFNLEPDDLGYRLIVDNANLIDAWLARPNKSGCETGMTCDRPDNCYTARNL 238

Query: 252 RNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +        +DY +           +              +    SDH  +  D+
Sbjct: 239 KQPNPAGKRLDYIMYKCG---KSDVDLVMCENRLGRIPGDKQINYSDHLGVYADF 290


>gi|260459328|ref|ZP_05807583.1| exodeoxyribonuclease III [Mesorhizobium opportunistum WSM2075]
 gi|259034882|gb|EEW36138.1| exodeoxyribonuclease III [Mesorhizobium opportunistum WSM2075]
          Length = 281

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 86/305 (28%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N ++                    +L ++      DIV LQE+ + +     
Sbjct: 22  IRVATFNVNGVNG----------------RLPVLLKWLGETQYDIVCLQELKTSDE---- 61

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +         +  +A+  +  +  ++   L G  D        
Sbjct: 62  ------KFPAEAIRNAGYGAIWHGQKSYNGVAILARGKQPQERRRGLPGDVDDTHSRY-- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E +   + V  ++L +       +  Y        +  + L D+         
Sbjct: 114 ------IEADIDGLVVGCLYLPNGNPAPGPKFDYK------LRWFERLIDYGRLLIRDSP 161

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+ GD+N                    +  +   + + +           + +     
Sbjct: 162 ASVLCGDYNVVPAPIDAAVPARWLSDAVYFPESRQAYAEMLAEGWIDAVRLIQPERGVYT 221

Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             N   +          +D+ ++  +  + L        +          ++ SDH P  
Sbjct: 222 YWNFSYRGGYDRSSGLRMDHLLVSPSLRERLGGAGVDVAV-------RGWEKPSDHAPAW 274

Query: 300 IDYDF 304
           I+ D+
Sbjct: 275 IELDW 279


>gi|149908150|ref|ZP_01896814.1| hypothetical protein PE36_01552 [Moritella sp. PE36]
 gi|149808692|gb|EDM68625.1| hypothetical protein PE36_01552 [Moritella sp. PE36]
          Length = 342

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/338 (12%), Positives = 96/338 (28%), Gaps = 60/338 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +++ ++N+    E        +     ++       +R Y      D++  QE+ S +++
Sbjct: 2   LKIATFNLFNYIEPPFACYDFDRIYDEQQWQKKQKWIRDYLAEHQPDVIGFQEVFSPDSL 61

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RVLQQSYPLLGAKDSF 137
             +  +  +  ++      +  +         AIA R        V+      +    S 
Sbjct: 62  KALVAECDYP-YFEVVDSADVIEDYIFRSPVVAIASRYPITAIAAVIPDGDLAVSMGLSS 120

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFC-------------------FLDSLENTY 177
               +R+ +   +E+          +H KS                     F   +  ++
Sbjct: 121 EYQFSRKPLRASIELPHLGTTDCYVVHFKSKRPMLESEDNELATTKAVLDAFSKQMCGSW 180

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------------YLG 219
             S    S+ A   +  I ++  +  P ++ GDFN  ++                     
Sbjct: 181 GSSMQRGSEAALLFQQMIQRRLATNNPMMLMGDFNDVLDHDRDGILSHLTMNTLRFNSDP 240

Query: 220 NNDDFWKTIDPNDSLIRFPKEK---------DSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
              D  K     DS   +               R   +        +DY ++        
Sbjct: 241 QAQDIVKQFSLQDSWHLYQHAANGVVASSTPAPRPATHYFYNKGSVLDYILLSCEFNAEY 300

Query: 271 IQESFSEILYNEDDIK------SRGKRLSDHCPISIDY 302
            +  +    Y+  D         R    +DH  + I+ 
Sbjct: 301 QRSLYEVSDYHTYDRHLINPIYERDSESTDHAVVQINL 338


>gi|37993837|gb|AAR07000.1| sphingomyelinase [Bacillus thuringiensis]
          Length = 252

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 84/230 (36%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +I GD N        N        +KT++ 
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNA 247


>gi|19703399|ref|NP_602961.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328758|ref|ZP_06871272.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19713467|gb|AAL94260.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154093|gb|EFG94897.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 253

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                 +       Y    +ADI  LQE    +A    
Sbjct: 1   MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                         + ++   ++   
Sbjct: 91  -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMVWEDEFRKYLKNLEKKK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +  +  +  F     +     
Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +   K L+                     SDHCP+ 
Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKSLVDAEIH-----------SQIEGSDHCPVV 246

Query: 300 IDYDF 304
           +  +F
Sbjct: 247 LFLEF 251


>gi|29654239|ref|NP_819931.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 493]
 gi|29541505|gb|AAO90445.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 493]
          Length = 255

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 90/294 (30%), Gaps = 51/294 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                     ++S+NI+                        +R+  + +DADIV LQE+ 
Sbjct: 3   SLTPKRDAFTVLSYNIHKGFSARYRRFV----------LPDIREALRAIDADIVLLQEVQ 52

Query: 76  SYNAVAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             +  +++             I  S      + K       H   A+       + ++  
Sbjct: 53  GKHHKSRLKKFAHADLPQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENIN 112

Query: 130 LLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           +     S S+  +R  +  +++     ++ V+ IHL  F              +    Q 
Sbjct: 113 V-----SLSQRASRSILHAIIDYEPTVELHVICIHLGLF-------------RAERDYQL 154

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L   I     S  P +IAGDFN      G  +   K ++  +       +        
Sbjct: 155 ITLSKRIEAHVPSHAPLIIAGDFNDW--RRGAFNYMEKELELKEVYKVLEGKH---AKTY 209

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              R  + +D           L   S           +S  K+LSDH P+   +
Sbjct: 210 PASRPTLEVDRIYYRG-----LKLLSGEIFN------ESYWKKLSDHLPLHAKF 252


>gi|148234330|ref|NP_001081058.1| deoxyribonuclease I [Xenopus laevis]
 gi|12249029|dbj|BAB20384.1| deoxyribonuclease I [Xenopus laevis]
          Length = 350

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 90/301 (29%), Gaps = 29/301 (9%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
             ++  +  C        ++ S+NI   S                    LL +     + 
Sbjct: 3   FLVLVAMTACFLQAGFAFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE- 52

Query: 67  DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            I+ ++E+      A+  +  + +     +   LI+     S+     A   R+  V+  
Sbjct: 53  -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYVYREDIVKPT 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +  +   G ++  + +  R             +  +           S +       +L 
Sbjct: 112 EWYHFDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAIMEVDALY 167

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                  +         +   +I GD+N   +Y+ +       +   + L+    +K+  
Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVASRHWPIIRLRHVEELVWLIGDKEDT 221

Query: 245 CNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301
             +          D  V       + ++ ++     Y+     +    K +SDH P+ ++
Sbjct: 222 TVSTNTN---CAYDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTYEMAKAVSDHYPVEVE 278

Query: 302 Y 302
            
Sbjct: 279 L 279


>gi|260428188|ref|ZP_05782167.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45]
 gi|260422680|gb|EEX15931.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45]
          Length = 304

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 90/298 (30%), Gaps = 39/298 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P     A  +R+ + N++ +  + G     +           L      L AD++  QEM
Sbjct: 34  PLPEPHADTLRVATLNVHYIDLRSGGEGPWSLAG-WERRKAALGDTVAALKADVIAFQEM 92

Query: 75  GSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------Q 126
            S+             + +          +    +      I  R   +R+         
Sbjct: 93  ESFRGGDDDSDNLARGYLLGRLPGFEAAATGDWRSFPSTQPIFYRTDRLRLEDQGWFFFS 152

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             P +    +F  +    A          G++  ++++HL+              S S  
Sbjct: 153 ETPEVIYSRTFDGSWPAFASWAEFTPVGGGQRFRLVNVHLEY------------RSASNR 200

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            + A+ +   +T   ++  P ++AGD N    +          +       RFP+   + 
Sbjct: 201 RRSAELIARRLTAVIDAGTPVILAGDLNALRGWRVMRILQDAGL-------RFPRVPAAT 253

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + N+ +     ID+                         ++  G   +DH P+ +D 
Sbjct: 254 YHLNRGVHLLPAIDHI----GLAGLDATGGPYV-----PQMQPGGVWPTDHHPVVLDL 302


>gi|302346017|ref|YP_003814370.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149189|gb|ADK95451.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 355

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 92/335 (27%), Gaps = 79/335 (23%)

Query: 2   IRKYVLALVFFLV---------PCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKR 49
           +R   L L+ FL+         P      +    ++++S+N+   S        KN    
Sbjct: 56  LRTIWLPLLGFLLCYGPIRTYSPFNIPEDKPHGAIKVLSYNVFMFSSWSEPDAKKNP--- 112

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  +  Y     ADIV LQE  +               +   + +I  +       
Sbjct: 113 -------IVDYIVKSKADIVCLQEAQATLDDKDHIYSTLKKHYPYFKLMIKKAPGADY-- 163

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               + +  K   + Q + P   + +              ++I G    V++ H +S   
Sbjct: 164 ----MVLLSKYPVLWQDTIPYGSSSNQSVAYM--------LDIKGTNTLVVNNHFESNGL 211

Query: 170 LDSLEN------------------------TYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               +                               +  + QA+ +  ++ +  +  VP 
Sbjct: 212 SSGDKEGFKTLVKGELKTGEAKRQSVHLITKLGDVSARRAPQAETVARYVKKYLDKKVPV 271

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           ++ GDFN        +    K ++       F +  +    +         ID+     +
Sbjct: 272 ILCGDFNDSP-LSYTHRTIAKELND-----CFVESGNGPGISYHKSGMYFRIDHIFCSDD 325

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +                       SDH PI  
Sbjct: 326 FDSY----GAKVDNSVTT---------SDHYPIYC 347


>gi|222086336|ref|YP_002544869.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium
           radiobacter K84]
 gi|221723784|gb|ACM26940.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium
           radiobacter K84]
          Length = 370

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/367 (12%), Positives = 99/367 (26%), Gaps = 86/367 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKR--------------------------TTSDYTL 56
            +RL ++N+  L  +   + ++N +++                          T     +
Sbjct: 2   SLRLATFNVENLLTRFDYTGFRNQLRQDRVLKLFDVKNENIYQQLEAARVVAATDDTRQM 61

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                 + +ADI+ LQE+ S  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  TALAIADANADIICLQEVDSMAALQAFEYGYLYRMVGNGYRQKFLIEGNDSRGIDVAVMM 121

Query: 117 R--------------KKNVRVLQQSYPLLGAK------DSFSRAGNRRAVELLVEINGKK 156
           R              K +  V  + + L   +          +   R  +EL + I G  
Sbjct: 122 REQTSDGQPIVLKDIKSHAMVTYRDFDLFTDELAALGLHEDDKIFKRDCLELDLTIGGVP 181

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFN 212
             +  +HLKS        +    +  +   +   ++  I  +  +       F I GD N
Sbjct: 182 FSLYVVHLKSMGPAREGVDGRQSTMPVRRAETLAVRHIIETRFGAGHTAAKNFAICGDMN 241

Query: 213 R----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
                              +                      +  +       + R    
Sbjct: 242 DYQERVDVIGTRHTGYRFEHRDEEASALDVFSHDGFVENVMRRRDELDRWTLYHARGPQE 301

Query: 256 ----PIDYFVMDQNAYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHC 296
                +DY  +     +         +               +           + SDHC
Sbjct: 302 QWLCQLDYIWLSPALARANAARLPDVVRSGQPFRTIFPPGQEVERYPRTGWDRPKASDHC 361

Query: 297 PISIDYD 303
           PI +  D
Sbjct: 362 PIVMTLD 368


>gi|90420403|ref|ZP_01228310.1| endonuclease/exonuclease/phosphatase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335131|gb|EAS48884.1| endonuclease/exonuclease/phosphatase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 248

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 71/284 (25%), Gaps = 58/284 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           +R V+WN +            +       D          L  DI+ LQE+   + +   
Sbjct: 16  IRAVTWNCHG-----------SIGADRRCDPDRTLATIARLGPDILALQEVDGRSHLGRR 64

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F      +  +    I  ++     D      +  +   V    + L          
Sbjct: 65  QRAFETLGQELLKTAGSQIVEARTVPREDRDYGHLLWSRWPIVSATIHTLPEPG-----V 119

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+E +V      + VL  HL                      QAQ+L + +     
Sbjct: 120 EPRAAIEAVVAAPSGHLRVLAFHLGLL-------------RRQRRAQAQFLAERVD---A 163

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             VP +  GD N         D             R P     R    +       +D  
Sbjct: 164 RDVPTLAMGDGN---------DLRLGGALHGALAPRLPVHTAPRSFPARWPML--RLDRI 212

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +                         +  SDH  +  D  +
Sbjct: 213 YASEGF------------SLVTHGPGHASRPASDHLAVMADLAW 244


>gi|315182338|gb|ADT89251.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           furnissii NCTC 11218]
          Length = 322

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 91/315 (28%), Gaps = 37/315 (11%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +VR  + N+ N L+       + N     +       L Q    L+AD++  QE+ S +A
Sbjct: 2   QVRFATANLFNYLAPPNAFYEFNNIYEQTQWQQKQRWLSQKLTTLNADVIGFQEVFSPHA 61

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +        +  ++      + S     +     IA R     V      L      F R
Sbjct: 62  LRDQVAALGYP-YFEVIDTPHVSDDYIYSSPVVGIASRFPLSEVAAVETSL--DGFHFHR 118

Query: 140 AGNRRAV----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
              R  +           ++   + + +    I                 S     Q+A 
Sbjct: 119 KPLRATLNHPALGQVDVYVVHFKSQRPMLHEPISDTLVDAWQQELRGRWQSAMQRGQEAH 178

Query: 190 WLKDWI-TQKKESLVPFVIAGDFNRKINY--------------LGNNDDFWKTIDPNDSL 234
            L   I  +K++   P V+ GDFN+ ++                            +   
Sbjct: 179 LLHQAIVQRKQQRQHPVVLMGDFNQVLSSMEFAALRATHRFRQPETCRPLIPYHLLDSWT 238

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSR 288
           +      + R   +        +DY ++     +           Y+ +D          
Sbjct: 239 LYSHSGDEQRQPTHYTGAAGQVLDYILLSSEFSRDADYPIALVSDYHVEDQHLINPHFDT 298

Query: 289 GKRLSDHCPISIDYD 303
            +  SDH  +S+  +
Sbjct: 299 DRFASDHALVSVTVE 313


>gi|118480154|ref|YP_897305.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis str. Al Hakam]
 gi|196047577|ref|ZP_03114786.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           03BB108]
 gi|118419379|gb|ABK87798.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis str. Al Hakam]
 gi|196021611|gb|EDX60309.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           03BB108]
          Length = 352

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 107/327 (32%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFPKN------TWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE+            +  + K  P         +   +    + N             +
Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N GK + ++++HL +     
Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA----- 219

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P 
Sbjct: 220 -----YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPE 274

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349


>gi|148251797|ref|YP_001236382.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. BTAi1]
 gi|146403970|gb|ABQ32476.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. BTAi1]
          Length = 271

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 74/306 (24%), Gaps = 64/306 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L +WNIN                       L+ +  K +  D++ LQE      +   
Sbjct: 3   LVLTTWNIN----------------SVRLRIDLVAKLIKQVRPDVLCLQE---TKCIDDA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +       RL       +    +  +AV  K        +   G +    +  +R
Sbjct: 44  FPLKRFK------RLGYEHIALNGQKGYHGVAVISKWP------FDSTGVRTFCDKVDSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  E       ++  +       D  +   +P      Q    +K           
Sbjct: 92  HISVAFGEKAQLARPLVLHNFYVPAGGDIPDPALNPKFEHKLQFLDEMKACEPLHPRGDD 151

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N   +                                 +    +        
Sbjct: 152 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPIECEKLLAAQSHGAWVDVARERIPMSEKV 211

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  + +           +   ++        +R SDH P
Sbjct: 212 YTWWSYRAADWTVGNRGRRLDHIWVSRALKD-------NVTDFSILRDARSWERPSDHVP 264

Query: 298 ISIDYD 303
           +++  D
Sbjct: 265 VTVTLD 270


>gi|297193885|ref|ZP_06911283.1| exodeoxyribonuclease [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720247|gb|EDY64155.1| exodeoxyribonuclease [Streptomyces pristinaespiralis ATCC 25486]
          Length = 277

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 75/305 (24%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + S N+N L                        ++     AD+V LQE+         
Sbjct: 14  LTVTSVNVNGLRAAAKKGF---------------VEWLATTAADVVCLQEVR-------- 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +                  +       +A+  +      +        D   R    
Sbjct: 51  AEADQLPPEVRNPDGRFTVYAPAAAKGRAGVALFTRREPDAVRIGFGSSEFDGSGR---- 106

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  ++ G  + V  ++L S       ++      S      + L+           
Sbjct: 107 ---YVEADLPG--VTVASLYLPSGEVGTERQDEKMRFMSEFLPYLKELRAR---SAADGR 158

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+ GD+N   +                     +   +     + +         +   
Sbjct: 159 EVVVCGDWNIAHHEADLKNWKSNRKNSGFLPEEREWLGRVFSEAEYVDVVRDLHPDQEGP 218

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY V      +  ++          +   + G+R SDH P+
Sbjct: 219 YTWWSYRGRAFDNDSGWRIDYQVATPGLARRAVKAWV-------ERAATHGERWSDHAPV 271

Query: 299 SIDYD 303
           +  Y+
Sbjct: 272 TAVYE 276


>gi|116749760|ref|YP_846447.1| exodeoxyribonuclease III Xth [Syntrophobacter fumaroxidans MPOB]
 gi|116698824|gb|ABK18012.1| Exodeoxyribonuclease III [Syntrophobacter fumaroxidans MPOB]
          Length = 265

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 79/303 (26%), Gaps = 72/303 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ ++N+N                   S    + ++      D + LQE+   NA     
Sbjct: 4   KVATFNVNG----------------IRSRMAPVLEWLDRHRPDALCLQELKCQNA----- 42

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                       R   +            +AV  ++         LL   D       R 
Sbjct: 43  -----DFPLDAFRKAGYFAAFRGQKAFNGVAVLSRSEPSEV----LLEFGDGKPDEEAR- 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              + V++NG  IW+++ ++      +     Y             LK W+  + E   P
Sbjct: 93  --LIAVKLNG--IWIVNTYVPQGRSPEEPAFEYKLDFFGR------LKSWLDGRFEPSQP 142

Query: 205 FVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANKN 250
            V  GD N     +   D                         L+   ++          
Sbjct: 143 LVWTGDINVAPEAIDLFDPKRLAGKVSFHPREHEALAAVAAWGLVDVFRKLHPDTKQFTF 202

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            +D+    +      ++          D      +  SDH P+  
Sbjct: 203 WDYRLPQSFKRNLGWRLDHIYATRTLADACLECQA-------DGEPRGRETPSDHTPVWA 255

Query: 301 DYD 303
           ++D
Sbjct: 256 EFD 258


>gi|313835987|gb|EFS73701.1| putative exodeoxyribonuclease III [Propionibacterium acnes
           HL037PA2]
 gi|314929662|gb|EFS93493.1| putative exodeoxyribonuclease III [Propionibacterium acnes
           HL044PA1]
 gi|314970515|gb|EFT14613.1| putative exodeoxyribonuclease III [Propionibacterium acnes
           HL037PA3]
 gi|328906267|gb|EGG26042.1| exodeoxyribonuclease III [Propionibacterium sp. P08]
          Length = 297

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 77/320 (24%), Gaps = 64/320 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+NIN +                        ++    D D+V LQE+    A   +
Sbjct: 1   MRIASFNINGIRAALKRGF---------------SEWMAARDCDVVGLQEVRCRPA--DL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-----------VRVLQQSYPLLG 132
                     S        +        TA A  +               + +       
Sbjct: 44  PEGAFGDRHVSWAPGSLAGRNGVALLTRTAPAEVRSWGTHLVMAPGQTPNLDEVVTGNTD 103

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQA 188
              +           + V++    + V  ++L      D              + L+   
Sbjct: 104 GLPTELLPFAEEGRYIEVDLADSLLTVACLYLPKGATPDPTNEKAIAKQDRKMAFLAGFR 163

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232
             L     +       F++ GDFN                           F   + P+ 
Sbjct: 164 DHLTRRCQECAAQGRHFLVIGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTIVSPDT 223

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +     +             +           IDY +      K  +           D
Sbjct: 224 LVDVLRAQHPDINGPYSWWSWRGKAFINDAGWRIDYHLASPELAKRAVTTEI-------D 276

Query: 284 DIKSRGKRLSDHCPISIDYD 303
              S  +R SDH  + +DYD
Sbjct: 277 RDSSYAERTSDHAAVVVDYD 296


>gi|229099528|ref|ZP_04230456.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
 gi|229118593|ref|ZP_04247945.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
 gi|228664785|gb|EEL20275.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
 gi|228683824|gb|EEL37774.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
          Length = 352

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  AQGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+            +  + K  P            + +              ++   K
Sbjct: 110 LQEVDIKSMRSFDINGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYADAGLSTFSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N  K   ++++HL +          
Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA---------- 219

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK+++ +  ++    ++ GD+N+ I+ +  +D  +    P   +  
Sbjct: 220 YDEGGKIRKQQVEYLKEYMNKHYKNGDYVIMGGDWNQLISNVQLSDPKFVKERPEWLVEL 279

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 338 EN----------SDHNPVSAVF 349


>gi|225867057|ref|YP_002752435.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           03BB102]
 gi|225788608|gb|ACO28825.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB102]
          Length = 352

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 107/327 (32%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFTL 109

Query: 71  LQEMG----------SYNAVAKVFPKN------TWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE+            +  + K  P         +   +    + N             +
Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N GK + ++++HL +     
Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA----- 219

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P 
Sbjct: 220 -----YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPE 274

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349


>gi|37993810|gb|AAR06982.1| sphingomyelinase [Bacillus cereus]
          Length = 252

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKENDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +I GD N                 +KT++ 
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNA 247


>gi|288962299|ref|YP_003452594.1| hypothetical protein AZL_d02240 [Azospirillum sp. B510]
 gi|288914565|dbj|BAI76050.1| hypothetical protein AZL_d02240 [Azospirillum sp. B510]
          Length = 269

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 53/288 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                      + +WNI++    +                  + Q  ++LD D++ LQE+
Sbjct: 32  SPVPDGMTAFSVATWNIHSCVGLDARFAPD-----------RVAQVIRDLDVDLIGLQEV 80

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           G ++       +  +   ++  +      + S    H    +  +      +   L    
Sbjct: 81  GWHHRGESGMDQFAFLEQHTGLKAYAAPTKHSARA-HYGNCLLTRLPVRSMEPIDL---- 135

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S  +   R  ++ ++E+ G+ + V+  HL    +               ++Q   +   
Sbjct: 136 -SVGKREPRGGIDAVIEVRGRPVRVIVAHLGLDPW-------------ERAKQVSDIVSR 181

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + ++    +P +  GD N              +               +   +       
Sbjct: 182 VERQPA--LPTLFMGDLNEWTPSSPRLRQLASSFADV-----------ANPRSFHARMPT 228

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +              +I   E       +R SDH P+    
Sbjct: 229 LRLDRIYVTGGL----------QIPAFEVVRTILTRRASDHLPVRAVL 266


>gi|213623922|gb|AAI70402.1| Deoxyribonuclease I [Xenopus laevis]
 gi|213625346|gb|AAI70400.1| Deoxyribonuclease I [Xenopus laevis]
 gi|213626040|gb|AAI70148.1| Deoxyribonuclease I [Xenopus laevis]
          Length = 350

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 90/301 (29%), Gaps = 29/301 (9%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
             ++  +  C        ++ S+NI   S                    LL +     + 
Sbjct: 3   FLVLVAMTACFLQAGFAFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE- 52

Query: 67  DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            I+ ++E+      A+  +  + +     +   LI+     S+     A   R+  V+  
Sbjct: 53  -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYVYREDIVKPT 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +  +   G ++  + +  R             +  +           S +       +L 
Sbjct: 112 EWYHFDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAIMEVDALY 167

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                  +         +   +I GD+N   +Y+ +       +   + L+    +K+  
Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVASRHWPIIRLRHVEELVWLIGDKEDT 221

Query: 245 CNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301
             +          D  V       + ++ ++     Y+     +    K +SDH P+ ++
Sbjct: 222 TVSTNTN---CAYDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTYEMAKAVSDHYPVEVE 278

Query: 302 Y 302
            
Sbjct: 279 L 279


>gi|254828780|ref|ZP_05233467.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           N3-165]
 gi|258601187|gb|EEW14512.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           N3-165]
          Length = 256

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 78/285 (27%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +  +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++      +         P + +  S +    R
Sbjct: 54  KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     + +GK+ ++ + HL                       A  L           
Sbjct: 113 ICVWGKFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAEN 159

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259
            P +I GDFN + +    N    K  D      +  K      +  + LR+      IDY
Sbjct: 160 SPVIILGDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPLRSINELEKIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             + +          F    Y     +  G   SDH P++ + D+
Sbjct: 220 IFVSEE---------FQVCTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|6978769|ref|NP_037229.1| deoxyribonuclease-1 precursor [Rattus norvegicus]
 gi|118921|sp|P21704|DNAS1_RAT RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I; Flags: Precursor
 gi|15420824|gb|AAK97471.1|AF397150_1 deoxyribonuclease I variant 1 [Rattus norvegicus]
 gi|15420826|gb|AAK97472.1|AF397151_1 deoxyribonuclease I variant 2 [Rattus norvegicus]
 gi|2439951|gb|AAB71495.1| deoxyribonuclease I [Rattus norvegicus]
 gi|58476417|gb|AAH89764.1| Deoxyribonuclease I [Rattus norvegicus]
 gi|149042671|gb|EDL96308.1| deoxyribonuclease I, isoform CRA_a [Rattus norvegicus]
 gi|149042672|gb|EDL96309.1| deoxyribonuclease I, isoform CRA_a [Rattus norvegicus]
 gi|149042673|gb|EDL96310.1| deoxyribonuclease I, isoform CRA_a [Rattus norvegicus]
 gi|149042674|gb|EDL96311.1| deoxyribonuclease I, isoform CRA_a [Rattus norvegicus]
          Length = 284

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 89/288 (30%), Gaps = 32/288 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+ ++NI T           ++     +  + + +       DI  +QE+   + V
Sbjct: 20  AATLRIAAFNIRTFG---------DTKMSNATLSSYIVKILSRY--DIAVVQEVRDTHLV 68

Query: 81  A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A  K+  +    I  +   +I+      +         R   V VL   +   G +   +
Sbjct: 69  AVGKLLDELNRDIPDNYRYIISEPLGRKSYKEQYLFVYRPSQVSVLDSYHYDDGCEPCGN 128

Query: 139 RAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              +R    +       ++     + L S       E        L  +Q   L+D    
Sbjct: 129 DTFSREPAIVKFFSPYTEVREFAIVPLHSAPTEAVSEIDALYDVYLDVRQKWGLED---- 184

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   +  GDFN   +Y+ ++      +  +        +       + +       
Sbjct: 185 -------IMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTATSTHCAY---- 233

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
           D  V+     +  ++  S     +  +   +    + +SDH P+ +  
Sbjct: 234 DRIVVAGALLQAAVVPSSAVPFDFQAEYRLTNQMAEAISDHYPVEVTL 281


>gi|320010283|gb|ADW05133.1| exodeoxyribonuclease III Xth [Streptomyces flavogriseus ATCC 33331]
          Length = 271

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 70/273 (25%), Gaps = 50/273 (18%)

Query: 58  RQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            ++    +A+++ LQE+   +     +V     W   Y+       +           I 
Sbjct: 21  VEWLGRTEAEVICLQEVRAEAQQLPDEVREPEGWHAVYAPAAAKGRAG--------VGIL 72

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
            R+   RV                   R    + V++ G  + V  ++L S       + 
Sbjct: 73  TRRAPERVQIGFGGFEVPGSEEFDTSGR---YIEVDLPG--VTVASLYLPSGEVGTERQE 127

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LG 219
                 +      Q LK             V+ GD+N                       
Sbjct: 128 EKERFMAAFLPYLQGLKARA---AAGGREVVVCGDWNIAHREADLKNWKSNRKNSGFLPE 184

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270
             +   +  D    +         +         +           IDY V         
Sbjct: 185 EREWLTRVFDEAAYVDVVRALHPEQEGPYSWWSYRGRAFDNDAGWRIDYQVATPGLAGRA 244

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              + G+R SDH P+++ Y+
Sbjct: 245 AKAWVE-------RAATHGERWSDHAPVTVTYE 270


>gi|260642545|ref|ZP_05416298.2| endonuclease/Exonuclease/phosphatase family protein [Bacteroides
           finegoldii DSM 17565]
 gi|260621683|gb|EEX44554.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides
           finegoldii DSM 17565]
          Length = 336

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 76/315 (24%), Gaps = 52/315 (16%)

Query: 29  WNINTLSEQEGVSLWKN------------SVKRTTSDYTLLRQYAKNL-------DADIV 69
           +N+  L + E                   + ++       + +    L          I+
Sbjct: 24  YNLENLFDTEDDPNNPGDDEFLPNGPYAWTPEKYQQKLKNMAKVIAKLAREKCPGGPAIL 83

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            + E+ +   +  +          S    I H        I        K   +L     
Sbjct: 84  GVSEIENRRVLEDLVKTEP---LASMGYEIVHYDSPDRRGIDVGCLYNPKLFTLLSSKVY 140

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                 S     +R  + +   + G+   ++  H  S    D        + ++    A 
Sbjct: 141 PFVMP-SQPNFRSRDQLLVSGLLAGESFHMIVNHWPSRYGGDRSSIYREAAAAITKHIAD 199

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSR 244
            +        +     +I GD N   N     +            P+          D  
Sbjct: 200 SIHA-----ADPNAKVLIVGDLNDDPNNKSTKEVLKACRKAADTKPDGYFNATWPLFDRG 254

Query: 245 CNANKNLRNKIPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGK------- 290
             +          D  ++  N         KF   E F+       + K +G        
Sbjct: 255 IGSLCYQDKWNLFDQLIISGNLLGKDRSTLKFWKAEIFNRDFLTTQEGKRKGYPWRTFSS 314

Query: 291 -----RLSDHCPISI 300
                  SDH P+ I
Sbjct: 315 NTFINGYSDHFPVLI 329


>gi|37993813|gb|AAR06984.1| sphingomyelinase [Bacillus cereus]
          Length = 252

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 82/230 (35%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +  GD N        N        +KT+  
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHA 247


>gi|21229250|ref|NP_635172.1| exodeoxyribonuclease III [Methanosarcina mazei Go1]
 gi|20907825|gb|AAM32844.1| Exodeoxyribonuclease III [Methanosarcina mazei Go1]
          Length = 258

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 72/306 (23%), Gaps = 81/306 (26%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           L+SWN+N L                                DIV +QE  +       +V
Sbjct: 7   LISWNVNGLRAAVKKGF---------------LDLLLEHRFDIVCVQETKVSQDKLPREV 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++ +     +S   + +               L++     G          R
Sbjct: 52  KNIQGYYNYFVSAEQNGYSGVGTFSK---------NKPIKLEK-----GMGIEVFDREGR 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  + +   +L+I+  +                          D+    K    
Sbjct: 98  F-----LRTDYEDFVLLNIYFPNG-------KASQERLGYKMAFYDAFLDYANALKSEGK 145

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             VI GD N                             K +      +   +  +     
Sbjct: 146 KLVICGDVNTAHKEIDLARPKQNEMISGFLPEERAWMDKFL--AAGYLDSFRMFNPEGGN 203

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           +DY  + +N  + +   S                  SDHCP+
Sbjct: 204 YSWWSMRTGARSRNVGWRLDYVFVSENLRENVKSASI-----------YPEIMGSDHCPV 252

Query: 299 SIDYDF 304
            ++ +F
Sbjct: 253 GLELEF 258


>gi|130500075|ref|NP_001076209.1| deoxyribonuclease-1 precursor [Oryctolagus cuniculus]
 gi|6015030|sp|O18998|DNAS1_RABIT RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I; Flags: Precursor
 gi|2315143|dbj|BAA21724.1| deoxyribonuclease I [Oryctolagus cuniculus]
          Length = 281

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 87/287 (30%), Gaps = 30/287 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A  +++ ++NI +  E               +  + + +  +    DI  +QE+   +  
Sbjct: 19  AGSLKIAAFNIRSFGET---------KMSNATLTSYIVRILQRY--DIALIQEVRDSHLT 67

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           AV K+  K       +   + +                R   V VL   Y   G +   +
Sbjct: 68  AVGKLLDKLNEKAADTYRFVASEPLGRRTYKERYLFVYRPDQVSVLDSYYYDDGCEPCGT 127

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +R    +       K+    I        D++    +     L  Q +W        
Sbjct: 128 DTFSREPAVVRFSSPSTKVREFAIVPLHSAPEDAVAEIDALYDVYLDVQKKW-------- 179

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
              L   ++ GDFN   +Y+ ++      +  N +      +       + N       D
Sbjct: 180 --GLQDVMLMGDFNADYSYVTSSQWSSIRLRTNPAFKWLIPDTADTTATSTNCAY----D 233

Query: 259 YFVM-DQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
             V+        ++  S +   +      S    + +SDH P+ +  
Sbjct: 234 RIVVAGPLLQDAVVPNSAAPFNFQAAYGLSNQLAQAISDHYPVEVTL 280


>gi|309811929|ref|ZP_07705701.1| putative exodeoxyribonuclease III [Dermacoccus sp. Ellin185]
 gi|308434141|gb|EFP58001.1| putative exodeoxyribonuclease III [Dermacoccus sp. Ellin185]
          Length = 269

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 79/304 (25%), Gaps = 68/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +   +                    ++    + D+V +QE+         
Sbjct: 1   MRVITANVNGIRAAQRRGG---------------LEWLAQQEPDVVAMQEV------RAS 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +    +  S       +  +S       +A+  K+      S      +         
Sbjct: 40  AKQFATALDGSALAEYELAHAESAAAGREGVAILTKHALASSSSVIDGFDEIGRW----- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             VE  V ++G+ + +  +++ +       +         L  +   L D          
Sbjct: 95  --VEADVVVDGRSVTIASVYVHTGEAGTDKQTAKYAFLDALEARMAQLVD---------R 143

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GDFN         +                +   +  N  +              
Sbjct: 144 PALVMGDFNVAHTANDLKNWKGNRGKAGFLEDEQAYLTRLTQNGWVDVVRANHGDVPGPY 203

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY            +              +  +R SDH  + 
Sbjct: 204 SWWSWRGKAFDNDSGWRIDYQFASPALAAVAREPWIG-------RAAAYDQRWSDHAAVV 256

Query: 300 IDYD 303
           +DYD
Sbjct: 257 VDYD 260


>gi|291394670|ref|XP_002713802.1| PREDICTED: endonuclease/exonuclease/phosphatase family domain
           containing 1 [Oryctolagus cuniculus]
          Length = 568

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 86/316 (27%), Gaps = 41/316 (12%)

Query: 10  VFFLVPCTASVAQK------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           +    P   + A        +RL +WN+   S    V    N   R     TLL    K 
Sbjct: 240 IISTRPSVEAFAGTRDGRPVLRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK- 294

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD------------SNNDIH 111
               ++ +QE+    A+ K   +    I  +  +                         +
Sbjct: 295 ----LLAVQELLDKEALEKFCAELNQPILPNIRKWRGPRGCWKAAVAEKPSSLLHKGSGY 350

Query: 112 TAIAVRK-KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           +         V +   +       +   ++          ++    + ++++HL +    
Sbjct: 351 SGFLWDTVAGVELKDVTSQESSPSNGHGKSAGPNPYVARFKVGSNDLTLVNLHLAALTLP 410

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                + +PS              + +  +     +I GDF +       +      +  
Sbjct: 411 AVENPSKNPSDGHR---LASFVQSLQETLKGEKDVIILGDFGQGPESSDCD-----VLRR 462

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRG 289
                  P    +   + KN +    +D   + ++  K                 I    
Sbjct: 463 EKFHPLVPAHTFTNI-STKNPQGSRSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNW 521

Query: 290 KR---LSDHCPISIDY 302
                 S+HCP+  ++
Sbjct: 522 SWGGVASEHCPVLAEF 537


>gi|254881020|ref|ZP_05253730.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA]
 gi|254833813|gb|EET14122.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA]
          Length = 324

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 75/294 (25%), Gaps = 71/294 (24%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +A     +RL+++NI   +  + V            D+  +     ++  ++V LQE+ S
Sbjct: 93  SAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVINHIHPEVVALQELDS 141

Query: 77  YN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                     + ++  +     +++             +     I +  K + V  ++  
Sbjct: 142 MTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGIGLLTKEIPVSLKTMT 193

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L G      R   R  +    +                   +                  
Sbjct: 194 LPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR-------------MA 227

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L+           PF +AGD N +                      F    D   +   
Sbjct: 228 SLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------QQDFQILSDVNQHTFP 277

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY    +   K     S   +              SDH P+ +  +
Sbjct: 278 APAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASDHRPLVVVLE 322


>gi|238018561|ref|ZP_04598987.1| hypothetical protein VEIDISOL_00388 [Veillonella dispar ATCC 17748]
 gi|237865032|gb|EEP66322.1| hypothetical protein VEIDISOL_00388 [Veillonella dispar ATCC 17748]
          Length = 251

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 73/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L         ++                  LDADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVTKGFMES---------------FNELDADIFCLQETKLQPD-QIS 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++++     +          +  AV  +   +   +   +   D   R    
Sbjct: 45  LELPGYEQYWNSAVKKGY----------SGTAVFTRIKPLSVTNGIGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       +++  +  +     +                  L        +   
Sbjct: 91  -----VITAEYDNFYLVCCYTPNSQRELARLEYRMAWEDAFRNYLLEL--------DKKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                              +        F           
Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTELLGAGFTDTFRHLYPDAIEEY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  +     + +    + ++            SDHCP+ 
Sbjct: 198 SWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIF-----------GSDHCPVE 246

Query: 300 IDYD 303
           +D D
Sbjct: 247 LDID 250


>gi|167923106|ref|ZP_02510197.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei BCC215]
          Length = 296

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 75/286 (26%), Gaps = 56/286 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
                +++R+ ++NI+                 T S    +      L AD++ LQE+  
Sbjct: 4   AQPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPL 52

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A           +   T                   AV  +      +   L     S
Sbjct: 53  GGARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----S 104

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F     R A++  +E     + V+  HL               S +  S Q   L   + 
Sbjct: 105 FGNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LA 148

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N         + F +       +  F +    R            
Sbjct: 149 AFDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS-- 197

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +     ++L+  +                   DH P+    
Sbjct: 198 LDRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 233


>gi|239832253|ref|ZP_04680582.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG
           3301]
 gi|239824520|gb|EEQ96088.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG
           3301]
          Length = 403

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/366 (12%), Positives = 101/366 (27%), Gaps = 86/366 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN----------------SVKRTTSDYTLLRQY------- 60
             + ++N+  L  +   S ++N                +  R       +          
Sbjct: 36  FTIATFNVENLMRRFDFSGFRNELHQDRTLQLFEISDEAQYRLLEQARAIAHADDTRQMT 95

Query: 61  ---AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                   ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R
Sbjct: 96  ALAIAETRADILCLQEVDNLAALNAFEYGYLFKMIGHGFRHKYLIDGNDSRGIDVAVMMR 155

Query: 118 ------KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKI 157
                 +        SY  +   D              +  R   R  + + + I GK +
Sbjct: 156 DTTRDGQPIEVDEVTSYAYVTYNDFGLYEPALGELGLEAHDRIFKRDCLNVDIRIAGKPL 215

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES----LVPFVIAGDFNR 213
            +   HLKS     +  +  + S  +   +A+ ++  I  K          ++I GDFN 
Sbjct: 216 SLFVTHLKSMTGARNGFDGRTSSLPVRRAEARAIRRIIEDKFGPSNVADRRWLICGDFND 275

Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIP 256
                               +         +    ++    +               +  
Sbjct: 276 YRERIIIGGDEWNGYEFTPMVEEESALDVLLGDGFAVNLVERRPVMDRWTLYHTRGPQER 335

Query: 257 ----IDYFVMDQNAYKFLIQESFSEILY------------NEDDIKSRGK---RLSDHCP 297
               +DY +   +  K   +   + +                D     G    + SDHCP
Sbjct: 336 HLCQLDYIMASPSFAKKNERAVPNIVRRGQPWRTIFPPGQQIDRYPRTGWDRPKASDHCP 395

Query: 298 ISIDYD 303
           +++  +
Sbjct: 396 VAVTLN 401


>gi|126723112|ref|NP_001075983.1| deoxyribonuclease-1 precursor [Equus caballus]
 gi|77416419|sp|Q4AEE3|DNAS1_HORSE RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I; Flags: Precursor
 gi|73532716|dbj|BAE19916.1| deoxyribonuclease I [Equus caballus]
          Length = 282

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 87/285 (30%), Gaps = 30/285 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +R+ ++NI T  E               +    + Q       DI  +QE+   +  AV
Sbjct: 22  SLRIAAFNIRTFGET---------KMSNDTLSNYIVQILNRY--DIALIQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+  +       +   +++     +N         R   V +L       G +   +  
Sbjct: 71  GKLLDRLNQDDPNTYHFVVSEPLGRNNYKERYLFVFRPDQVSLLDSYQYNDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +R    +       ++    I        D+L    S     L  Q +W          
Sbjct: 131 FSREPAIVKFSSPFTQVKEFAIVPLHAAPSDALAEIDSLYDVYLDVQQKW---------- 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            +   ++ GDFN   +Y+ ++      +  N +      +       + +       D  
Sbjct: 181 DMEDIMLMGDFNAGCSYVTSSQWPSIRLRRNPAFWWLIPDTADTTVKSTHCAY----DRI 236

Query: 261 VMDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
           V+     +  ++ +S     +      +    + +SDH P+ +  
Sbjct: 237 VVAGTLLQEAVVPDSAVPFDFQAAYGLNDQTAEAISDHYPVEVTL 281


>gi|257881925|ref|ZP_05661578.1| AP endonuclease [Enterococcus faecium 1,231,502]
 gi|257890085|ref|ZP_05669738.1| AP endonuclease [Enterococcus faecium 1,231,410]
 gi|258615657|ref|ZP_05713427.1| exodeoxyribonuclease [Enterococcus faecium DO]
 gi|260558703|ref|ZP_05830892.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium C68]
 gi|293563951|ref|ZP_06678361.1| exodeoxyribonuclease III [Enterococcus faecium E1162]
 gi|294617705|ref|ZP_06697329.1| exodeoxyribonuclease III [Enterococcus faecium E1679]
 gi|294623736|ref|ZP_06702567.1| exodeoxyribonuclease III [Enterococcus faecium U0317]
 gi|257817583|gb|EEV44911.1| AP endonuclease [Enterococcus faecium 1,231,502]
 gi|257826445|gb|EEV53071.1| AP endonuclease [Enterococcus faecium 1,231,410]
 gi|260075162|gb|EEW63475.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium C68]
 gi|291596042|gb|EFF27311.1| exodeoxyribonuclease III [Enterococcus faecium E1679]
 gi|291596861|gb|EFF28081.1| exodeoxyribonuclease III [Enterococcus faecium U0317]
 gi|291604080|gb|EFF33604.1| exodeoxyribonuclease III [Enterococcus faecium E1162]
          Length = 250

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +    LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAIVNKNF---------------LEVFHELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D+  R    
Sbjct: 45  LDLPGYYQYWN----------YAERKGYSGTAIFAKKPALNATYGMGIDIHDTEGRL--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +++  +  +        +             + L        +   
Sbjct: 92  ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +          +  N  +  F     ++    
Sbjct: 138 PVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  ++    L                      SDHCP+ 
Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAKIHT-----------DIMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|167587986|ref|ZP_02380374.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu]
          Length = 253

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 81/280 (28%), Gaps = 56/280 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+ +R+ ++NI                    +    +      LDAD++ LQE+    + 
Sbjct: 16  ARDLRIATYNIRGGFGI-----------WHAAAADRIAAVIDELDADVIALQEVPLGGSR 64

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                     +  +T             +     AV  +      ++  L     SF   
Sbjct: 65  GADV---LAHLRAATGLNAAAGVTIDTTERRYGNAVLSRCPIRASRTLDL-----SFRHR 116

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A++  ++     I V+  HL               S +  S+Q Q L   +     
Sbjct: 117 EPRGALDADIDCGAGLIRVVATHLGL-------------SAAERSEQVQRL---LAAFDT 160

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             +P ++ GD N         +   +       + RF +    R            +D  
Sbjct: 161 GAMPVILLGDIN---------EWLMRGRALRALVTRFRRAPAPRTFPTLYPLF--ALDRI 209

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +               ++       +R +R SDH P+  
Sbjct: 210 WIHPG----------ELLIDVAVHRSARARRASDHYPLVA 239


>gi|37993807|gb|AAR06980.1| sphingomyelinase [Bacillus cereus]
          Length = 252

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 84/230 (36%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  VSTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSPPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +I GD N        N        +KT++ 
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNA 247


>gi|319902450|ref|YP_004162178.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319417481|gb|ADV44592.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 360

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 81/297 (27%), Gaps = 62/297 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+     +                   + ++ +    D++  QE          
Sbjct: 104 LKIATYNVQDFGYEVTGYSC-----------KEIARFMEREGVDVLCFQEFDDNED---- 148

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP ++     S               I    ++R      +   YPL G +    +    
Sbjct: 149 FPMDSIRRALSHWP---------YALIPNDDSIRGVLPMAVFSRYPLSGHRFITYQGSAN 199

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQAQ------WLKDW 194
            ++   + +    I +L+ HL++                  +     A         +++
Sbjct: 200 CSMMCDIALGTDTIRLLNNHLQTTSVSQKRRKWEREMKADDTRREVHAAKDAAYTLHENF 259

Query: 195 ITQKKE----------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           + + ++          S  P ++ GDFN   +         + +        F       
Sbjct: 260 VKRTEQTYIISYYAKHSPYPVLVCGDFNSLPSSHTYYH-LREFLKDG-----FRTAGHGY 313

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +  +  +  + IDY                       D         SDH P+ ++
Sbjct: 314 MHTYRYGKGLLRIDYIFHSPTLE-------------GIDYYSPDLDLCSDHNPVIME 357


>gi|241761646|ref|ZP_04759733.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373954|gb|EER63487.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 261

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 75/305 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ S+N+N ++                +    L ++ +    DI+ LQE+ S +A     
Sbjct: 3   KIASFNVNGIN----------------ARLPRLIEWLEKFQPDILCLQELKSDDA----- 41

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                           +         +  +A+  K     Q         D      +R 
Sbjct: 42  -----RFPQEEIEKTGYYCLYHGQKAYNGVAILSK----EQPKLIRTSLPDDPDPTQSRY 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +E     + V  ++L +   L+S +  Y  +        +          +    
Sbjct: 93  -----IEAAIDNLTVSSLYLPNGNPLNSSKYDYKLA------WFKAFLAHARSLWQQEKS 141

Query: 205 FVIAGDFNRKINYL-----------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            ++AGD+N   ++                   ++  +W+ +          + +      
Sbjct: 142 VILAGDYNVVPSFDIKDIRNAAALADNALLAPDSLFYWRQLLAMG-WTDSLRVRHPSEPL 200

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + ID+ ++  +    L            D      ++ SDH P+
Sbjct: 201 YSFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGV-------DRQMRGQEKASDHAPV 253

Query: 299 SIDYD 303
            I+ D
Sbjct: 254 WIEID 258


>gi|228948804|ref|ZP_04111080.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|301056563|ref|YP_003794774.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis CI]
 gi|228810861|gb|EEM57206.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|300378732|gb|ADK07636.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus biovar anthracis str. CI]
          Length = 352

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 108/322 (33%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+            +  + K  P            + +     +        ++   K
Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTFSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P+  +  
Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 279

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 338 EN----------SDHNPVSAVF 349


>gi|261366200|ref|ZP_05979083.1| exodeoxyribonuclease III [Subdoligranulum variabile DSM 15176]
 gi|282572018|gb|EFB77553.1| exodeoxyribonuclease III [Subdoligranulum variabile DSM 15176]
          Length = 251

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N L                        +  + LDAD   +QE       A  
Sbjct: 1   MKFVSWNVNGLRACLKKGFE---------------ETFRTLDADFFCIQETKMQPGQADF 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+      YS            +   ++  A+  +   +  +     G ++       R
Sbjct: 46  APEGYTEYIYSA-----------DKKGYSGTAIWARTPALSVR----YGLEEDLHNHEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +++++++ +     +  +        L +  Q L        ++  
Sbjct: 91  ---AITLEYPD--FYLVNLYVPNSQNELARIDYRMQWEDDLRRYLQAL--------DAQK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                              +        F           
Sbjct: 138 PVILCGDLNVAHTEIDLKNPGPNRGAAGFSDQERGKLDELLAAGFTDTFRHLHPDATGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++       + +                    SDHCP++
Sbjct: 198 SWWSMRFRARERNAGWRIDYFLVSNRLAPQIRKADIL-----------MDILGSDHCPVT 246

Query: 300 IDYD 303
           ++ D
Sbjct: 247 LELD 250


>gi|224539496|ref|ZP_03680035.1| hypothetical protein BACCELL_04401 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518891|gb|EEF87996.1| hypothetical protein BACCELL_04401 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 254

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 89/303 (29%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L       L                ++ +   AD+V +QE          
Sbjct: 1   MKIITYNVNGLRAAVSKGLP---------------EWLEQEQADVVCIQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +     +     H    +    ++ +A+  K        +   G          R
Sbjct: 38  LQPDQYPEEALSTLGYKHYLYSAQKKGYSGVAILTKKEP----DHVEYGMGIEEYDNEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   I V+ ++  S    D  +       +      +  ++++T+ ++S  
Sbjct: 94  F-----IRADFGDISVVSVYHPSGTSGDERQ-------AFKMVWLEKFQEYVTELRKSRP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  +D                W T   N   I   +          
Sbjct: 142 KLILCGDYNICHEPIDIHDPIRNATNSGFLPEEREWMTRFLNAGFIDTFRLLHPEQQEYT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++ +     L +        +           SDHCP+ +
Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVTEPVRPLLKEARILNDAVH-----------SDHCPMLL 250

Query: 301 DYD 303
           D +
Sbjct: 251 DIE 253


>gi|153207659|ref|ZP_01946323.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212218503|ref|YP_002305290.1| endonuclease/Exonuclease/phosphatase family protein [Coxiella
           burnetii CbuK_Q154]
 gi|120576478|gb|EAX33102.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212012765|gb|ACJ20145.1| endonuclease/Exonuclease/phosphatase family protein [Coxiella
           burnetii CbuK_Q154]
          Length = 255

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 90/294 (30%), Gaps = 51/294 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                     ++S+NI+                        +R+  + +DADIV LQE+ 
Sbjct: 3   SLTPKRDAFTVLSYNIHKGFSARYRRFV----------LPDIREALRAIDADIVLLQEVQ 52

Query: 76  SYNAVAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             +  +++             I  S      + K       H   A+       + ++  
Sbjct: 53  GKHRKSRLKKFAHADLPQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENIN 112

Query: 130 LLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           +     S S+  +R  +  +++     ++ V+ IHL  F              +    Q 
Sbjct: 113 V-----SLSQRASRSILHAIIDYEPTVELHVICIHLGLF-------------RAERDYQL 154

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L   I     S  P +IAGDFN      G  +   K ++  +       +        
Sbjct: 155 ITLIKRIEAHVPSHAPLIIAGDFNDW--RRGAFNYMEKELELKEVYKVLEGKH---AKTY 209

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              R  + +D           L   S           +S  K+LSDH P+   +
Sbjct: 210 PASRPTLEVDRIYYRG-----LKLLSGEIFN------ESYWKKLSDHLPLHAKF 252


>gi|163749109|ref|ZP_02156359.1| extracellular nuclease [Shewanella benthica KT99]
 gi|161331179|gb|EDQ02068.1| extracellular nuclease [Shewanella benthica KT99]
          Length = 886

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/387 (10%), Positives = 102/387 (26%), Gaps = 101/387 (26%)

Query: 19  SVAQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSD------------------YTLL 57
           +    +R+ S+N+  L   +   G  L      +  +D                   T +
Sbjct: 459 ATKGDIRVASFNVLNLFTSDSEIGGPLNPTCADQADADASRGCGRGAHTLDEYLLQRTKI 518

Query: 58  RQYAKNLDADIVFLQEMGSY-----NAVAKVFPK--------NTWCIFYSTERLINHSKR 104
                 ++ADIV L E+ +      +++  +           + +    + +      + 
Sbjct: 519 VNALIEMNADIVGLMEIENNGFSESSSIQYLLNSINAELPAIDAYQFIEAADADKYKGQF 578

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD------------------SFSRAGNRRAV 146
             ++ I   I  R   V+    ++ +   +                          R ++
Sbjct: 579 IGSDAIAVGILYRPNKVKPTGDAFIIATPEQHAAEGVATRGEGDDVEISPGYDKYQRHSL 638

Query: 147 ELLVEINGKKIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWI 195
               +I+ +K+ ++  HLKS                   +            A+ + + I
Sbjct: 639 AQTFQIHDEKLTIVVNHLKSKGSGCLEDWLEFSESKDPADLQGKCNEFRVSAAKVIGEAI 698

Query: 196 TQKKES------------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------ 231
              +                P  +  D++   +        W TI+              
Sbjct: 699 KDIEGDILVIGDLNAYGMEDPVRVLTDYDAATSTRDVVTASWTTINGEVYEQEGSVIEKG 758

Query: 232 -DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              +    +   +   +         +D+ + + +    L+      I   E  +     
Sbjct: 759 FGLINLNTQAHGAETYSYSYGGELGNLDHALGNASVAARLVDIQDWHINSVESSLFEYPN 818

Query: 291 RL-------------SDHCPISIDYDF 304
           +              SDH P+ +   +
Sbjct: 819 KYTGDLVKSENVFSSSDHDPVIVALSY 845


>gi|163746515|ref|ZP_02153873.1| metal-dependent hydrolase [Oceanibulbus indolifex HEL-45]
 gi|161380400|gb|EDQ04811.1| metal-dependent hydrolase [Oceanibulbus indolifex HEL-45]
          Length = 236

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 80/285 (28%), Gaps = 55/285 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A   Q +R+VS+NI      +              D   + +  ++L AD+V LQE   
Sbjct: 3   PAVAPQSLRIVSYNIRKAMGTDR-----------RRDPERIMRIIRSLHADVVVLQEADR 51

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A              +  R +      S      A+ VR        +   L G    
Sbjct: 52  RRAPRPSALPLDRIEKETGLRAVPTPNDVSIGWHGNAVLVRPSAKIDRVEHLTLPG---- 107

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R A+   + I  +++ V+  HL                     +Q   +   + 
Sbjct: 108 ---VEPRGAMVADLHIGARQLRVIASHLGLLRPS-------------RKEQLSAMIAHLD 151

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P +IAGD N     +G      +                +   +         
Sbjct: 152 ACAAC--PTLIAGDLNEWSQKVGLGRLAKRF------------TIHAPGKSYHARMPVAH 197

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +D   +DQ+                      + +R SDH PI +D
Sbjct: 198 LDRIALDQHLTVLQGGV----------VETPQTRRASDHLPIWLD 232


>gi|145594579|ref|YP_001158876.1| sphingomyelin phosphodiesterase [Salinispora tropica CNB-440]
 gi|145303916|gb|ABP54498.1| Sphingomyelin phosphodiesterase [Salinispora tropica CNB-440]
          Length = 318

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 104/338 (30%), Gaps = 56/338 (16%)

Query: 1   MIRKYVLALVFFLVPC--------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
           M R   L L   L            A+    +++++ N+  L      SL+ N  + T +
Sbjct: 1   MKRPQTLLLAVVLTATGLLAPAAPAAAAPVPLKVLTHNVMFLP----QSLFPNWGQVTRA 56

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           +      Y      DIV LQE+    A  ++  +      Y T  L              
Sbjct: 57  NLISEADYIAGQ--DIVVLQELFDNEASDRLKDQLAAQYPYQTPVLGRSKSGWDATLGSY 114

Query: 113 --------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
                    + +  +   + +  Y       +   + N+  V   ++IN   + V+  H 
Sbjct: 115 SHATPEDGGVTILSRWPILEKVQYVYADGCGADWFS-NKGFVYAQLDINNTPVHVVGTHA 173

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDD 223
           ++     +          + + Q   L  ++  ++  +    ++AGD N        +  
Sbjct: 174 QAADTGCADGT----GARVRAAQFDELDAFLDARQIPTDEQVIVAGDLNVDRYSTEYDSM 229

Query: 224 FWKTIDPNDSLIRFPKEKDSRCN----ANKNLRNKIPIDYFVMDQNAY------------ 267
             +    + +    P   D++ N     N +  ++  +DY +                  
Sbjct: 230 LTRLDVSDATFTGHPYSWDAQRNDMADYNDDQDSRQQLDYVLQRNGHARHGSGDNETLAV 289

Query: 268 ---KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              ++ +   F    Y +           DH P++ + 
Sbjct: 290 EAPQWCVTSWFVRYCYTDYA---------DHYPVAANI 318


>gi|91789279|ref|YP_550231.1| exodeoxyribonuclease III [Polaromonas sp. JS666]
 gi|91698504|gb|ABE45333.1| Exodeoxyribonuclease III [Polaromonas sp. JS666]
          Length = 272

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 80/304 (26%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L ++N+N                   +    L  +      D+V LQE+    A+  V
Sbjct: 1   MKLATFNVNG----------------IKTRLPNLLSWLAKESPDLVCLQEL---KALDGV 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAG 141
           FP+       +  R   +            +A+  +  +   +++  P     D      
Sbjct: 42  FPQ-------AELREAGYGAVWKGQRSWNGVAILAKDSDPVEIRRELPGDPGDDQSRY-- 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +E  V      I V  ++L +       +  Y  +        + L        +S
Sbjct: 93  ----LEATVN----GIIVACLYLPNGNPQPGPKFDYKLA------WFERLNRHAQALYQS 138

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
             P  +AGDFN                         + +  +     +            
Sbjct: 139 GQPVALAGDFNVVPTDFDIYNPKSWLKDALLQPESREAYARLLSQGWVDSLRHLHPDERI 198

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ +++      L            D      +  SDH P 
Sbjct: 199 YTFWDYFRQHWQKNSGLRIDHILLNAELAPGLKAAGV-------DTWVRDEEHASDHAPT 251

Query: 299 SIDY 302
            ++ 
Sbjct: 252 WVEL 255


>gi|77461257|ref|YP_350764.1| aminoacyl-tRNA hydrolase [Pseudomonas fluorescens Pf0-1]
 gi|77385260|gb|ABA76773.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 265

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 80/279 (28%), Gaps = 40/279 (14%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNT 88
           +   +     +    +          LR+  +++ AD+VFLQE+     +   +     T
Sbjct: 20  VRRFTVLTVNTHKGFTALNRRFILPELREAVRSVSADVVFLQEVHGTHEHHPKRYNNWPT 79

Query: 89  WCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
              +     S      + +     +     AV  K   V   +  +  +        NR 
Sbjct: 80  MPQYEFLADSLWPQFAYGRNAVYPEGDHGNAVLSKFQIVRHDNLDVSISGH-----ENRG 134

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +  ++ + G    V  I +                 S  + Q   LK  + +      P
Sbjct: 135 LLHCVLRLPGDDREVHAICVHLGLR-----------ESHRNAQLALLKKRLAE-LPEDAP 182

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++AGDFN               ++P      F         +       + +D   +  
Sbjct: 183 VIVAGDFNDWRQRAD------ALLEPCGLREVFAAHHGRSARSFPARLPLLRLDRIYVSN 236

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                L       +             LSDH P+S++ +
Sbjct: 237 -----LKASQPKVL------ANRPWSHLSDHAPLSVEIE 264


>gi|301165090|emb|CBW24658.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 608

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 89/305 (29%), Gaps = 67/305 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK +L L   L   +A     +RL+++N+   +  +G+            +Y  +    
Sbjct: 1   MRKLLLLLFSALFVLSAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVI 49

Query: 62  KNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   DIV +QE+ S  A +    V  +                     +     I +  
Sbjct: 50  NNARPDIVAIQELDSMTARSNRTDVLKELAERTQLHPCFAPAID----YDGGKYGIGILS 105

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +  Q++ L G      R   R  +         +      HL              
Sbjct: 106 KETPLRVQTFALPG------REEARTLLVAEFP----EYVFACTHLSLTEED-------- 147

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIR 236
                   + + L+   +   ++  PF +AGDFN   +     D    ++ +        
Sbjct: 148 --------RMKSLEILKSVTADTRKPFFLAGDFNSDADSGFIKDLKSTFQILS------- 192

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                            K  +DY +  +      +  S   I              SDH 
Sbjct: 193 ---NPKQPTYPAS--EPKETLDYLIALKQETPTFVVNSARVI---------DEPLASDHR 238

Query: 297 PISID 301
           P+ ++
Sbjct: 239 PLLVE 243


>gi|126730406|ref|ZP_01746217.1| exodeoxyribonuclease III, putative [Sagittula stellata E-37]
 gi|126709139|gb|EBA08194.1| exodeoxyribonuclease III, putative [Sagittula stellata E-37]
          Length = 262

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/308 (9%), Positives = 72/308 (23%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
              L +WNIN                       L+ +  +    D++ LQE  S      
Sbjct: 2   SFTLATWNIN----------------SVRLRKALVSKLMQEEAPDVLCLQECKSPVEKIP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +VF +  +                     +  +A+  +                +    
Sbjct: 46  HEVFAELGYRYM-----------VGRGQKGYNGVAILSRLPLEDVGDKDFAALGHARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V   +E     + + + ++ +    D  +   +            ++DW   ++ 
Sbjct: 93  -----VAARLENG---VTIHNFYVPAG--GDEPDREKNIKFGQKLDYLTEMRDWFHTERP 142

Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRC 245
                ++ GD N         ++    K +                   +   ++     
Sbjct: 143 ERA--ILVGDLNIAPREDDVWDHKKLLKIVSHTPIEVEHLGAAQDAGGWVDITRKDIPDG 200

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +                        ++ SDH
Sbjct: 201 RLFSWWSYRAKDWDAADKGRRLDHIWATPDIADAGHSS-------RILRAARGWEQPSDH 253

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 254 APVFATFD 261


>gi|226361308|ref|YP_002779086.1| exodeoxyribonuclease III [Rhodococcus opacus B4]
 gi|226239793|dbj|BAH50141.1| putative exodeoxyribonuclease III [Rhodococcus opacus B4]
          Length = 267

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 75/305 (24%), Gaps = 66/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  + +  D D++ +QE    +     
Sbjct: 1   MRIATWNVN----------------SVRARTDRILDWLQRSDVDVLAIQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y   R + +            +A+  +   +        G           
Sbjct: 41  ------QFPYERFRELGYEVAHVGLSQWNGVAIASRVG-LDDVQIGFEGQPGFHKDPEVA 93

Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKES 201
            A E   +      + V  +++ +   L     TY      L   A+   D +    +  
Sbjct: 94  PAQEARAIGATCNGVRVWSLYVPNGRELADPHYTYK-----LEWLAKLHTDAVGWLDRNP 148

Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                + GD+N                         + ++    +               
Sbjct: 149 DAQIALVGDWNVAPTDEDVWDPALFEGKTHTSVPEREAFQAFVESGFADVVRPHTPGP-G 207

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +        + +          D  + +GK  SDH P
Sbjct: 208 VYTYWDYTQLRFPKKQGMRIDFVLGSPALAGRVDKAEI-------DRNERKGKGASDHAP 260

Query: 298 ISIDY 302
           + +D 
Sbjct: 261 VIVDL 265


>gi|254500886|ref|ZP_05113037.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
            DFL-11]
 gi|222436957|gb|EEE43636.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
            DFL-11]
          Length = 1702

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/359 (11%), Positives = 86/359 (23%), Gaps = 72/359 (20%)

Query: 17   TASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD 65
               V   +++ S+N+         +   +           S          +      +D
Sbjct: 1334 VPDVGGSLKVGSFNLLNFFTTLDQTGNTSGPSGLDPRGAESAAEFERQVDKMIAALAEMD 1393

Query: 66   ADIVFLQEMGSYN---------AVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIA 115
            ADI+ LQE+ +           A+  +          +        +  D+++ I   + 
Sbjct: 1394 ADIIGLQELENEYGDQNGDGQFALQYLVNALNEATGRNYTFVDPGVNYGDTSDAIMVGMI 1453

Query: 116  VRKKNVRVLQQS-------------------YPLLGAKDSFSRAGNRRAVELLVE--ING 154
                 V +   +                       G         +R  + +       G
Sbjct: 1454 YDADAVEIADGTSVARLTDADLAGLENLTDLNVDPGHAVFDGAGTSRAPLAVTFTELETG 1513

Query: 155  KKIWVLDIHLKSFCFLDSLENTY------SPSCSLLSQQAQWLKDWITQKK--ESLVPFV 206
              I V   H KS   +    N          +     Q A+ L  W+            +
Sbjct: 1514 GDITVAVNHFKSKGSVSPFGNNEGIGDGTGNNNEARLQAAEALDAWLATNPTGSDDTDIL 1573

Query: 207  IAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            I GD N  +          +       +      +             ++++   +D+ +
Sbjct: 1574 ILGDLNSYLMEDPIQYLLSQDDGLIDFNLLGGDNQTSFGFPVDLGTAPSVQSFGALDFAL 1633

Query: 262  MDQNAYKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303
               +    +       I   E                         R SDH P+ I  D
Sbjct: 1634 ASNSLLDQVTGAEEWNINAFEASALDYNTNFKPDSQISDLYAADQYRASDHNPMLIGLD 1692


>gi|325261710|ref|ZP_08128448.1| exodeoxyribonuclease III [Clostridium sp. D5]
 gi|324033164|gb|EGB94441.1| exodeoxyribonuclease III [Clostridium sp. D5]
          Length = 250

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 76/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                        ++    DADI  +QE          
Sbjct: 1   MKFISWNVNGIRACVQKGF---------------LEFFSQADADIFCIQETKMQEG-QLS 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +       +   D   R    
Sbjct: 45  LELEGYHQYWN----------YAVKKGYSGTAVFSKIEPLSVVYGIGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  + + ++  +     +  +             + L++          
Sbjct: 91  -----VITLEYEDFYFVTVYTPNAQNELARLDYRMKWEDDFRAWLKKLEE--------NK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +     +  F      +    
Sbjct: 138 PVVVTGDMNVAHKEIDLKNPKTNRKSAGFSDEERQKFTELLDAGFIDTFRYFYPDQEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L+                     SDHCP+ 
Sbjct: 198 SWWSYRFRAREKNAGWRIDYFCVSECLKDRLVDAGILT-----------DIMGSDHCPVV 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LEMN 250


>gi|229496874|ref|ZP_04390582.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316192|gb|EEN82117.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas
           endodontalis ATCC 35406]
          Length = 343

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/352 (13%), Positives = 88/352 (25%), Gaps = 59/352 (16%)

Query: 1   MIRKYVLALVFFLVPCTASV---AQKVRLVSWNINTLSEQE----------GVSLWKNSV 47
           M R     ++     CT S    A ++ +  +N+  L +                 + + 
Sbjct: 1   MNRSIYFFILLIFSVCTLSAQKVAHRIPIAFYNVENLFDCNDDANDDAEFLPDGKREWTE 60

Query: 48  KRTTSDYTLLRQYAKNLDAD----IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
           +R       L     ++ AD    +V L E+ + + +  +    +          I H  
Sbjct: 61  ERYQQKLNNLAHVLGDI-ADKGGAVVGLAEVENRHVLENLVRNPS---IRKRNYSIIHYD 116

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                 I  A+    K   +       +   +  S+   R  +     I+ +    +  H
Sbjct: 117 SPDPRGIDCALLYDAKIFHLKSSGVRFIALPEE-SKIPTRDILFATGTIDNELFHFIVGH 175

Query: 164 LKSFCFLD-SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
             S    D +       +   + Q A  L       +      ++ GDFN         +
Sbjct: 176 WPSRYGGDPASAGRRMVAAQTMRQVADSLLR-----EYPGSKAILMGDFNDDPFDASVVE 230

Query: 223 DFW--KTIDPNDSLIRFPK---EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE---- 273
                +TID   +   F                       D  V+  N  K   Q     
Sbjct: 231 GLNLCQTIDETHATDLFSPMLSMYRQGAGTLAYKGKWNLFDIMVVSGNLLKKNTQGLHLY 290

Query: 274 ----------------------SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                              +     SDH P+ +   
Sbjct: 291 QDPESHQLAYIFRRDYLLRQTPKHRGEPLRTFSGNNYLGGYSDHLPVYLYLT 342


>gi|171915906|ref|ZP_02931376.1| exodeoxyribonuclease III [Verrucomicrobium spinosum DSM 4136]
          Length = 250

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 82/300 (27%), Gaps = 76/300 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N +                      LR+Y    DAD++ LQE+ +    A +
Sbjct: 1   MKLVSWNVNGIRACMDKG---------------LREYLTACDADVICLQEVKAMEEQAGL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                + + ++  +   +          +  A+  +           +G          R
Sbjct: 46  EWFKDYQVVWNAAQKKGY----------SGTAILTRQPI----KSHAIGMGIDEHDKEGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V++++  +     +                + L+           
Sbjct: 92  -----VITVEFPDYYVVNVYTPNAQAELARLPYRLLWDDAFRLYLKNLEQ--------TK 138

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
           P +  GD N   N +           P                  +   +  DSR +   
Sbjct: 139 PVLACGDLNVAHNEIDIARPKENRFSPGFSDQERASFGKLLESGFVDTFRHFDSRPHQYS 198

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY++  Q     L                      SDHCP+ +
Sbjct: 199 WWSYRANARGNNVGWRIDYWLASQGLKDGLKSSIIR-----------PDIHGSDHCPVEL 247


>gi|149706121|ref|XP_001501241.1| PREDICTED: similar to endonuclease/exonuclease/phosphatase family
           domain containing 1 [Equus caballus]
          Length = 569

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 82/296 (27%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNVRVLQQSYPLL 131
             +    I  +  +                          +           L+ +    
Sbjct: 312 CTELNQPILPNIRKWKGPRGCWKAVVAETPSAQLQKGAGFSGFLWDAAAGVELRDAASQE 371

Query: 132 GAKDSFSRAGN-RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            +  +  R  +         ++    + ++++HL +         + + S S        
Sbjct: 372 SSPGNGHRKPSGPSPYLARFKVGSNDLTLVNLHLATLTLPGGENPSKNHSDSHR---VAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     ++ GDF +  +    +      I   +              + KN
Sbjct: 429 FAQTLQETLKGEKDVIVLGDFGQGPDSSDYD------ILRKEKFHHLIPAHTFTNISTKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  ++
Sbjct: 483 PQGSRSLDNIWISRSLKKIFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 538


>gi|77735773|ref|NP_001029581.1| endonuclease/exonuclease/phosphatase family domain-containing
           protein 1 [Bos taurus]
 gi|122145064|sp|Q3MHJ7|EEPD1_BOVIN RecName: Full=Endonuclease/exonuclease/phosphatase family
           domain-containing protein 1
 gi|75948260|gb|AAI05213.1| Endonuclease/exonuclease/phosphatase family domain containing 1
           [Bos taurus]
 gi|296488465|gb|DAA30578.1| endonuclease/exonuclease/phosphatase family domain-containing
           protein 1 [Bos taurus]
          Length = 571

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 80/296 (27%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 263 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 313

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKK-NVRVLQQSYPL 130
             +    I  +  +                                    V +   ++  
Sbjct: 314 CVELNQPILPNIRKWKGPRGCWKAVVSETPSTQLQKGAGFAGFLWDTAAGVELRDAAWQE 373

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +         + + S S        
Sbjct: 374 SSPGNGHGKPVGPSPYLARFKVGSHDLTLVNLHLATLTLPGGENLSKNHSDSHRW---AS 430

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     ++ GDF +  +    +      I   +              + KN
Sbjct: 431 FTQTLQETLKGEKDVIVLGDFGQGPDSSDYD------ILRKEKFHHLIPAHTFTNISTKN 484

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  ++
Sbjct: 485 PQGSKALDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 540


>gi|37993834|gb|AAR06998.1| sphingomyelinase [Bacillus thuringiensis]
          Length = 252

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +I GD N                 +KT++ 
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNA 247


>gi|319638482|ref|ZP_07993244.1| endonuclease/exonuclease/phosphatase [Neisseria mucosa C102]
 gi|317400231|gb|EFV80890.1| endonuclease/exonuclease/phosphatase [Neisseria mucosa C102]
          Length = 261

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 91/287 (31%), Gaps = 47/287 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---- 75
             + V + S+N++             S          +      L +D++FLQE+     
Sbjct: 2   SPRPVTITSYNMH----------KGMSALNRKVQVNRMADALGALGSDVLFLQEVQGQHL 51

Query: 76  SYNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           + +          + I   S +   ++ K       H   A+  +     + +  +    
Sbjct: 52  NRSRRTDFPDAPHYDIIGDSLDYHRSYGKNAVYPKRHHGNAILSRLPLKTENNLNI---- 107

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S ++   R  +   V   G +  ++ + +                     +Q + + D+
Sbjct: 108 -SVNKLEQRGLLHCEVVPEGWEDPLVCLCVHLNLREPD-----------RLKQYRAISDY 155

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P +IAGDFN       +  +  + +D N+    F      R     +    
Sbjct: 156 VDRHINPDSPLIIAGDFNDW--RQKSARELGRALDLNE---VFVDNTGKRPKTFPSRLPI 210

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           + +D                  +++ +E       + LSDH P+S+ 
Sbjct: 211 LSLDRIYTRN-----------LDVIDSEIHNSKDWQHLSDHLPLSVT 246


>gi|262170443|ref|ZP_06038121.1| extracellular nuclease-related protein [Vibrio mimicus MB-451]
 gi|261891519|gb|EEY37505.1| extracellular nuclease-related protein [Vibrio mimicus MB-451]
          Length = 867

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/373 (13%), Positives = 96/373 (25%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  S+          +      LDADIV L E
Sbjct: 471 GDLRIATFNVLNYFNSPFGGDANQHGGNRGASNLVEFEVQQAKIVNAIVRLDADIVGLME 530

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 531 IENNGFGEGSAIAQLVNQLNSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 590

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 591 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 650

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202
           HLKS                      +      +     A  L D +++           
Sbjct: 651 HLKSKGSACWEDAAPVEQGGQGGQDLDYQGACENFRVAAAVALGDALSKIDGHKVILGDM 710

Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  P ++  D+             N  I  +    D    I  +   +     K  
Sbjct: 711 NSYGMEDPMLVLTDYTPEKYGKPIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAMKHP 770

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 771 DSWSYSFNDEVGALDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 830

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 831 RASDHDPAVLELN 843


>gi|217425444|ref|ZP_03456938.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 576]
 gi|254265260|ref|ZP_04956125.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710a]
 gi|217391695|gb|EEC31723.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 576]
 gi|254216262|gb|EET05647.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 338

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               +++R+ ++NI+                 T S    +      L AD++ LQE+   
Sbjct: 47  QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPLG 95

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A           +   T                   AV  +      +   L     SF
Sbjct: 96  GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A++  +E     + V+  HL               S +  S Q   L   +  
Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                +P ++ GD N         + F +       +  F +    R            +
Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +     ++L+  +                   DH P+    
Sbjct: 241 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275


>gi|126457011|ref|YP_001075914.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106a]
 gi|242313530|ref|ZP_04812547.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106b]
 gi|254194220|ref|ZP_04900652.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei S13]
 gi|126230779|gb|ABN94192.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106a]
 gi|169650971|gb|EDS83664.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei S13]
 gi|242136769|gb|EES23172.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106b]
          Length = 338

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               +++R+ ++NI+                 T S    +      L AD++ LQE+   
Sbjct: 47  QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPLG 95

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A           +   T                   AV  +      +   L     SF
Sbjct: 96  GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 147

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A++  +E     + V+  HL               S +  S Q   L   +  
Sbjct: 148 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 191

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                +P ++ GD N         + F +       +  F +    R            +
Sbjct: 192 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 240

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +     ++L+  +                   DH P+    
Sbjct: 241 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 275


>gi|315147719|gb|EFT91735.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4244]
          Length = 254

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 46/286 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKI 255
           Q      P ++ GDFN ++    +     K  D  +    + P+         K      
Sbjct: 158 QY-----PTLLMGDFNAELGEAVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELE 212

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            IDY  +          + +             G+  SDH P+  +
Sbjct: 213 EIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|312129153|ref|YP_003996493.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
 gi|311905699|gb|ADQ16140.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
          Length = 293

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 94/312 (30%), Gaps = 43/312 (13%)

Query: 1   MIRKYVLALVFFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M R+  + L    +P  +    V+   R+++ NI        +   +      +S   + 
Sbjct: 1   MKRRNFIQLSVGALPLLSFKFPVSAGHRIMTCNIR-----VALDEDEEKGVGWSSRKKIC 55

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                    DI+ LQE+    A       + + +       ++ +    +      I   
Sbjct: 56  LDIISKYKPDIICLQEVLKGQAADFKKHFSGYQLLGFDGPEMDANPVGYHGIAKNPILYS 115

Query: 118 KKNVRVLQ------QSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCF 169
            K   ++          PL+    S+  A  R A  + ++    GK+  V+++HL     
Sbjct: 116 TKKYELISAGTYWLSETPLVAGSKSWDTARARHANWIRLKDKSTGKEFRVINLHLDHVSN 175

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                            Q + + +   Q   +  P ++ GDFN +      +        
Sbjct: 176 D------------AKFHQLKMVIEEAGQYLPA-FPQILCGDFNSRFQSKVFSTPRNAGWK 222

Query: 230 PNDSLIRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
               ++   KE     +A K L+         ID+     +                   
Sbjct: 223 EGMEILYGEKEMGFTGHAFKGLQYEKGPSGGRIDFIWYKGD---------IEVKRAEILR 273

Query: 285 IKSRGKRLSDHC 296
            + +G   SDH 
Sbjct: 274 DEVKGVYPSDHF 285


>gi|288799645|ref|ZP_06405104.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332893|gb|EFC71372.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 299 str. F0039]
          Length = 250

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 81/305 (26%), Gaps = 79/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                           K LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRASVTKGFE---------------DIFKTLDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  K+  +  Q    +   D   R    
Sbjct: 45  LQFEGYESYWN----------YADKKGYSGTAIYTKHSPLSVQYGIGIDQHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V +  ++ +++ ++  +        +               L        ++  
Sbjct: 91  -----VVTLEFEQFYLVTVYTPNSQDELKRLDYRMEWERDFQAYLVKL--------DASK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                         +    +  N  +  F           
Sbjct: 138 PVVVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREKMTNLLDNGFIDTFRYLYPEEV-TY 196

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ +     L        ++            SDHCP+ 
Sbjct: 197 SWWSYRFKAREKNTGWRIDYFLISERLKSNLTDAKIHTDIF-----------GSDHCPVE 245

Query: 300 IDYDF 304
           +D  F
Sbjct: 246 LDLTF 250


>gi|255036745|ref|YP_003087366.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
 gi|254949501|gb|ACT94201.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
          Length = 254

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 78/300 (26%), Gaps = 72/300 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++++N+N +                      L  + +   ADI+  QE+ +   V  +  
Sbjct: 3   ILTYNLNGIRAALKNG---------------LLDWLQTTPADILCFQEVKATPDVVDLSG 47

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   +           +    ++ +A+  K           + A D+  R      
Sbjct: 48  FRALGYELAGW-------HAAEKKGYSGVAIFSKIQPDRVVMGCDIPAYDAEGR------ 94

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++  +   + VL+ +  S    D  ++      +        L+             
Sbjct: 95  ---VLRADFGDLTVLNCYFPSGTSGDVRQSVKMRFLTDFLVWVNELRK-------ERPNL 144

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANKNL 251
           +I GD+N     +  +D                       +      +  +         
Sbjct: 145 IICGDYNIAHTEIDIHDPVRNQKSSGFLPEERAWMTEWFSNGYTDAFRFMNPTLRQYSWW 204

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           IDY  + +     +I              +      SDHCP+ ++ 
Sbjct: 205 TYRAGARGNNKGWRIDYISVSEPLKFRIIAS-----------RQYNDAVHSDHCPVWLEI 253


>gi|29828020|ref|NP_822654.1| hypothetical protein SAV_1479 [Streptomyces avermitilis MA-4680]
 gi|29605122|dbj|BAC69189.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 303

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/287 (10%), Positives = 68/287 (23%), Gaps = 35/287 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +++ ++++N+   S  E                 ++R+  +     ++  QE       
Sbjct: 44  GRRLDVMTFNLRFASASE--------PHSWAVRRPVMRELLRRERPHVIGTQEGLYQQVR 95

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                      +  T R              T      +         P +   +++   
Sbjct: 96  DIEADLGPHYDWIGTGRAGGSRDEFMAVFYDTRRLAPLEYDHFWLSDTPDVIGSNTWGGG 155

Query: 141 GNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             R    +         +    L+ HL +             +  +              
Sbjct: 156 SIRMVTRVRFRDLADGDRPFHFLNTHLDNASQYARARAAALIADRI-------------A 202

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--RNKI 255
             +   P V+ GDFN   +     +        +       + K             +  
Sbjct: 203 GLDRSQPLVVTGDFNAAAHKNAVYETMLGAGLVDTWDTAAERGKLYGTFHGYKPLVPDGD 262

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+ +                   + +   S G+  SDH P+    
Sbjct: 263 RIDWILASPGVAA---------HCASINAFSSNGQFPSDHLPVQASL 300


>gi|42523806|ref|NP_969186.1| hypothetical protein Bd2360 [Bdellovibrio bacteriovorus HD100]
 gi|39576013|emb|CAE80179.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 395

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 100/347 (28%), Gaps = 71/347 (20%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---------------------------- 45
                  A +V ++S+N+  L +        +                            
Sbjct: 31  FSLPPKAADEVSVMSFNVENLFDTTHDENRNDYTYMPLAVKQKDPKIVQACKDTNDSSYR 90

Query: 46  ---------SVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYNAVAKVFPKNTWCI-F 92
                    S ++       L +    +D    D++ L E+ + N +     K      +
Sbjct: 91  VSECLSTDWSEEQLDKKLQNLSKVVLGVDGNGPDVLMLIEVENENVLNIWNKKYLQKAGY 150

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE- 151
            +   +    KR  +  + + + V  K   +    +     +D      +R  +E+ ++ 
Sbjct: 151 STVVLIEGPDKRGIDLGLMSRLPVVGK-PVLHPIPWKPKNDEDKKWMEASRGVLEVTLKA 209

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
            NG  I  L  H  S             + +   QQA      + + K      +  GD 
Sbjct: 210 PNGDPITFLTAHFPS-----------QANPTYWRQQAAEFVAKLIKDKGPDTMVIAGGDL 258

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--- 268
           N         + F  T  P   +  F   K+     +   ++   +D  +  +   +   
Sbjct: 259 NITHEEESKENIFRDTFSPVGDVSHFVGCKECP-GTHNYRKSWSFLDAHIYSKALLEKGS 317

Query: 269 ---FLIQESFSEILYNEDDIKSRGK----------RLSDHCPISIDY 302
               +   +   I Y+E  +K               ++DH P+ +  
Sbjct: 318 GSYKMEPGTIDVIRYDEVHLKKGKYPLRWDYDRQIGVADHFPLYVRL 364


>gi|42523979|ref|NP_969359.1| hypothetical protein Bd2555 [Bdellovibrio bacteriovorus HD100]
 gi|39576187|emb|CAE80352.1| hypothetical protein Bd2555 [Bdellovibrio bacteriovorus HD100]
          Length = 343

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 106/343 (30%), Gaps = 71/343 (20%)

Query: 27  VSW-----------NINTLSEQEGVSLWKNSVKRTTSDYTL----------------LRQ 59
           ++W           N   L         K ++    + +                  + +
Sbjct: 1   MTWTETTNLKFCLLNAENLFLMFDGIPSKEALNLKEAHWQRLSTSVYENKPLKKTQDIAK 60

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             K ++ADI+ L E+G   ++      N   +F          + +S  +I     +RK 
Sbjct: 61  ALKEINADIIMLCEVGGLESL-----NNFNLLFMDEAYSPCLIEGNSERNIDVGFLIRKG 115

Query: 120 NVRV---------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
                                    L   YP+ G K + S   +R  VEL +  + +   
Sbjct: 116 LPFYFDLQSNKHRLINYLYPHERDSLAHGYPVKGGKITTSHKFSRDVVELKLFKSDRDKP 175

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKIN 216
            + I L         E            + + L +   + +++    P ++AGDFN    
Sbjct: 176 FMIILLTHLKSRLDPERIDPNGFERRQAELRTLIEIYQELEKTHPQVPVMVAGDFNGNAG 235

Query: 217 YLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNA--NKNLRNKIPIDYFVMDQNAYKF 269
             G +++F       ++     + +   E+ +      N +  +   ID+  +    + +
Sbjct: 236 LTGTDEEFKDIYNLTSLRDVLEVAQLEIEERATFYQVRNSSRADGRQIDFVFIPPLLHPY 295

Query: 270 LIQESFSEILYNEDDIKSRG---------KRLSDHCPISIDYD 303
           L   S     Y ++   +              SDH P+  + +
Sbjct: 296 LKPASAHVHRYKDEFGMAHDIPRNMDAKLSLPSDHYPLVFEIE 338


>gi|319780945|ref|YP_004140421.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166833|gb|ADV10371.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 289

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 89/312 (28%), Gaps = 57/312 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           ++LV++NI      +G             D   +    +   AD++ LQE+   N     
Sbjct: 1   MKLVTYNIQYGIGLDG-----------QYDVGRIADAVR--GADVIALQEVTRNNPRNGG 47

Query: 79  ---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPL 130
                        +   Y +    N      N    T        V  +    L ++  L
Sbjct: 48  RDMVAEIGEALPDYFAVYGSNFEANIGSHIDNGRAVTKTFQLGNMVLSRTPIHLSRNLLL 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             ++        R A+E L+E     I    IHL     L+           +L+   + 
Sbjct: 108 PRSRSFEMMNFQRGALEALIETPLGFIRFYSIHLDHRSPLERASQIQFLRQRMLNYALEG 167

Query: 191 -----LKDWITQKKESLVPFVIAGDFNRKINYLG-------NNDDFWKTIDPNDSLIRFP 238
                + +    +      FV  GDFN               + +F   +  + ++    
Sbjct: 168 GALSGVAEIGLPELPHPEAFVGMGDFNMLAGSPEYVELAGRPDHEFGMPLTADFAVDAAL 227

Query: 239 KEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           +   +  +    +  K          IDY     +  + L +               R  
Sbjct: 228 RLNATGDDLISWVDPKQPTDPSRHKRIDYIFTSASLARSLQRLWV-----------DRKA 276

Query: 291 RLSDHCPISIDY 302
             SDH P+ ++ 
Sbjct: 277 VGSDHLPVWVEL 288


>gi|281425366|ref|ZP_06256279.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           oris F0302]
 gi|281400529|gb|EFB31360.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           oris F0302]
          Length = 347

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/351 (11%), Positives = 97/351 (27%), Gaps = 63/351 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------SV 47
           ++K V  LV   V    S  +K  +     +N   L +    +  ++             
Sbjct: 1   MKKQVFLLVALFVCLATSAQKKFSVYAVGFYNQENLFDTCHDAGKRDYDFLPTGSYRWDG 60

Query: 48  KRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
            + +     + +   ++  D+        + L E+ +   +  +  +       +     
Sbjct: 61  LKYSHKLHNMARALADMGTDVLPNVGCAVIGLSEVENRKTLEDLTAQPELK---ARNYQF 117

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
            H +      I  A+        +  ++  P   + +  +    R  + +  ++  + + 
Sbjct: 118 AHIEGPDKRGIDCALIYNPSLFTMESETLVPYRNSTEQDTSFVTRGFLTVTGKLANEPVA 177

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  HL S     S     +        QA+ +KD +       +   + GD N      
Sbjct: 178 FIVCHLPSRFSGPSYREWGAL-------QAKAVKDSL-LVLNPQMKVFVMGDMNDDPTDK 229

Query: 219 GNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
              +      +       +     +   K                D  VM  N      +
Sbjct: 230 SMYEALSAKENIEKVGADDMYNPWYNILKKQGKGTLMYRGTWNLFDQIVMTPNLLNKKGE 289

Query: 273 ESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
            +F+ + + ++ I+                             SDH P+ +
Sbjct: 290 NNFTTLKFWKNQIQRMPYLFQSEGQYKGSPKRTTAGGVWLDGFSDHLPVCV 340


>gi|229527450|ref|ZP_04416842.1| extracellular nuclease-related protein [Vibrio cholerae 12129(1)]
 gi|229335082|gb|EEO00567.1| extracellular nuclease-related protein [Vibrio cholerae 12129(1)]
          Length = 869

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 90/373 (24%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           HLKS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HLKSKGSACWEDAAPVEQGGQAGQDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMDDPMLVLTDYTPEKYRKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAIKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|257125417|ref|YP_003163531.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
 gi|257049356|gb|ACV38540.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
          Length = 248

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 90/290 (31%), Gaps = 59/290 (20%)

Query: 24  VRLVSWNINTLSE---QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75
           ++ + +NI   +     +     +  + R+      + ++      DIV L E+      
Sbjct: 1   MKFLLYNIRYGTGKYLNQPFKHMRGYLGRSVRHIYRIGKFINKYKPDIVGLVEVDLGSFR 60

Query: 76  --SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             S N    +         Y  +   + +            A+  K   + ++ + L   
Sbjct: 61  MYSRNQATLLGRITRNNNVYQYKYEEDSNYMKFPMVRKQGNALLSKKPVLREEFHYLDIG 120

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                         L++E+  + + V  +HL                     +Q   L +
Sbjct: 121 MKK-----------LIIEVETEDVVVFLVHLALGG-------------KTRQKQIVQLYN 156

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           ++   K+   P ++AGDFN              +   N ++ + P           +   
Sbjct: 157 FVKNCKK---PVIVAGDFNVFWGEEEIEMFLQASNLRNINIRKDP--------TFPSWNP 205

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           K  +D+ +  +         S+  I            +LSDH PI +D++
Sbjct: 206 KRELDFILCSKEIKVK----SYEVIQT----------QLSDHLPILVDFE 241


>gi|170582912|ref|XP_001896345.1| exodeoxyribonuclease III family protein [Brugia malayi]
 gi|158596475|gb|EDP34813.1| exodeoxyribonuclease III family protein [Brugia malayi]
          Length = 314

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 85/309 (27%), Gaps = 75/309 (24%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             ++++++SWN+  L      +                       + DI+ LQE    + 
Sbjct: 55  SGREIKIISWNVAGLRALIKKNG---------------HSVLVEENPDIIALQETKCVDV 99

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            +++  +N +  F +      H            + + K+    +  S+      D    
Sbjct: 100 PSEL--QNGYHTFLNASEKSGHGGV---------LLLTKEEPIKVTYSFDDKSKCDIDGN 148

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  +        +  ++++ ++ +        +             + L        
Sbjct: 149 GKGRIIIA-----EYESYYLINAYVPNSGRGLVNLDKRKIWDDYYLTFIKKL-------- 195

Query: 200 ESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +   P V  GD N                          + +  +     +  F +    
Sbjct: 196 DLSKPVVYVGDLNVAHQEIDLANPKTNRNKTAGFTDQERNDFTRLLDAGFVDVFRRLNPD 255

Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +  A     N            +DYFV+ +     + +      +           + SD
Sbjct: 256 KEGAYTFWSNMHNAREKNVGWRLDYFVVSERIMNKVKKCDILHSI-----------KGSD 304

Query: 295 HCPISIDYD 303
           HCP+S+  +
Sbjct: 305 HCPLSLTIE 313


>gi|254450397|ref|ZP_05063834.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238]
 gi|198264803|gb|EDY89073.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238]
          Length = 262

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 71/306 (23%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN++  +EG+                + +       D++ LQE  S      
Sbjct: 2   SFTLATWNINSVRLREGL----------------VARLMTQEAPDVLCLQECKSPVDKIP 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +            + L  H         +  +A+  K       +   +    +   AG 
Sbjct: 46  L---------EQFQALGYHHMVARGQKGYNGVAIFSKMPIEEVAAEDFVSLGHARHIAGR 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                         + V + ++ +    D      +            ++D+        
Sbjct: 97  L----------DNGVTVHNFYVPAG--GDKPNREVNEKFGQKLDYLTEMRDYFGANAPEK 144

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GD N         D                    +      +   +      N 
Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKVVSHTPVEVEHLADVQGAGDWVDVTRADIPHGNL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                        ++ SDH P
Sbjct: 203 YSWWSYRAPDWESADKGRRLDHVWATPDIANSAHSS-------RVIRAVRGWEQPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|257415859|ref|ZP_05592853.1| predicted protein [Enterococcus faecalis AR01/DG]
 gi|257157687|gb|EEU87647.1| predicted protein [Enterococcus faecalis ARO1/DG]
          Length = 278

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 85/287 (29%), Gaps = 46/287 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+++ ++N+        V    +   + +     + Q     D  +  +QE+        
Sbjct: 24  KMKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDL 76

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---- 138
                     Y+T   ++  +         AI   ++ V+ +   Y  L           
Sbjct: 77  KA--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHP 128

Query: 139 -RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                R A+  L +         V+++HL           +     + ++   + L D I
Sbjct: 129 EAGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKI 180

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNK 254
            Q      P ++ GDFN +     +     K  D  +    + PK         K     
Sbjct: 181 AQY-----PTLLMGDFNAESGEAVHQLVQKKFQDSKNLATHYGPKGTFQNFTYTKPWAEL 235

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 236 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 272


>gi|225569150|ref|ZP_03778175.1| hypothetical protein CLOHYLEM_05230 [Clostridium hylemonae DSM
           15053]
 gi|225161949|gb|EEG74568.1| hypothetical protein CLOHYLEM_05230 [Clostridium hylemonae DSM
           15053]
          Length = 250

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 78/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                         + +  DADI  +QE          
Sbjct: 1   MKCISWNVNGIRACVQKGFM---------------DFFQEADADIFCIQETKMQEG-QLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +       +   D   R    
Sbjct: 45  LETPGYFQYWN----------YAERKGYSGTAVFTKKEPLSFTCGIGIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ + + ++  +     +  +             + L++          
Sbjct: 91  -----VITLEFEEFYFVTVYTPNSQSELARLSYRMEWEDAFLAYLKKLEE--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                         + ++ I  +  +  F           
Sbjct: 138 PVIFCGDLNVAAEEIDLKNPKTNRKNAGFTDEEREKFRKIKASGFVDTFRYFYPDEEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + Q+  + L                      SDHCP+ 
Sbjct: 198 SWWSYRFRAREKNAGWRIDYFCVSQSLKERLEDARIHT-----------DVMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|167521878|ref|XP_001745277.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776235|gb|EDQ89855.1| predicted protein [Monosiga brevicollis MX1]
          Length = 362

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 76/314 (24%), Gaps = 34/314 (10%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +   ++ + ++N+  + L      S    +         LL Q    +  D++ L E  +
Sbjct: 47  TQQLRLTVAAFNVLADGLDVNGQWSYIDPATVTFERRKDLLLQEIDRIAPDVLGLAECNN 106

Query: 77  -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                A    +  +   +  +     + R        A+ VR      L         + 
Sbjct: 107 FTEFWAPELARRGYHGVFQPKSH-GPAARFGAQPDGVALFVRTAAGLELIGEPLRNAMRP 165

Query: 136 SFSRAGNRRAVELLVEINGKK-----------IWVLDIHLKSFCFLDSLENTYSPSCSLL 184
               A  R  +     IN                V   H K+     +       +    
Sbjct: 166 VAISALVRAGLTAESTINKSSTPAMTSSPAFLFRVAMTHFKAGKGDSNTALRRQDT---- 221

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----LGNNDDFWKTIDPNDSLIRFPKE 240
                 L       +  +   ++ GDFN +             F   ++         ++
Sbjct: 222 QMLLTQLDAAAAAAESEVQATIVMGDFNCEPTEDCHAPWRERGFLCAVEDMPWTTWKFRD 281

Query: 241 KDSRCNANKNLR---------NKIPIDYFVM--DQNAYKFLIQESFSEILYNEDDIKSRG 289
             +                   +  IDY  +     A   +          +        
Sbjct: 282 TPTEPGTAPPPGTAPLTQPKEKREKIDYIYVLNGPGAQVAVEAFLDVPADADIPRALPAP 341

Query: 290 KRLSDHCPISIDYD 303
              SDH  ++   +
Sbjct: 342 NYASDHLAVAARLN 355


>gi|325182155|emb|CCA16608.1| exodeoxyribonuclease putative [Albugo laibachii Nc14]
          Length = 375

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 77/307 (25%), Gaps = 66/307 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+ +++++WN+N L         +               Y +  DADI+ L E    +  
Sbjct: 110 AESLKIIAWNVNGLRALLKYDESRYFH-----------AYVREEDADIICLSETKIDSPQ 158

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +          +             +   +   AV  K   +  +S+       S    
Sbjct: 159 VEKMEDLLPKYPFQYWSCA-------HKKGYAGTAVCSKLEPLQVRSHLDDSTLGSTEGR 211

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                    + +  +K W++  ++ +     +               A  L+   + +KE
Sbjct: 212 F--------LALEFEKFWLVHTYVPN-----AGMKLERLGDRTTQWDAVLLQTLQSLEKE 258

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA------------- 247
           S    +  GD N     +  +D                                      
Sbjct: 259 SEKGVIWCGDLNVAHQDIDIHDPKNNRNKSPGFTDAERNNFGETLKTGFVDTFRHFHPEK 318

Query: 248 --NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           +DYFV+ +     +                  G + SDH 
Sbjct: 319 QQFTYWSYRFNARTRNKGWRLDYFVVSERLMAQVKASFVR-----------EGVKGSDHV 367

Query: 297 PISIDYD 303
           P+     
Sbjct: 368 PVGAILS 374


>gi|255077378|ref|XP_002502331.1| predicted protein [Micromonas sp. RCC299]
 gi|226517596|gb|ACO63589.1| predicted protein [Micromonas sp. RCC299]
          Length = 328

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 82/323 (25%), Gaps = 48/323 (14%)

Query: 25  RLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVA 81
           R+ S+NI               +S  +  +    L      LD+D++ LQE+        
Sbjct: 6   RITSYNILAQCYVRSSYFPHSPSSCLKWKARSRNLVNELAGLDSDVLALQEVDQYEEFWQ 65

Query: 82  KVFPKNTWCIFYSTERLINHSKRDS-------------------NNDIHTAIAVRKKNVR 122
               +  +   Y     +  SKRD                     NDI     V   +  
Sbjct: 66  PWLVERGYDGVYKCRTQLTKSKRDGCGLFFKRDKFELLARRDIEYNDIAWGRPVGYVHPE 125

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW--VLDIHLKSFCFLDSLENTYSPS 180
              +        D  +    R  V +L  +  K      + +      +  +  +     
Sbjct: 126 GSPEPTEAPVDADGGANKYIRDCVGVLALLRSKTATDGYVMVASTHLYWDPAHADVKLAQ 185

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW--------------- 225
              L  + +      +      VP V AGDFN       ++                   
Sbjct: 186 ARRLLGEVELFLA--SNSPIGSVPVVTAGDFNSVPGSEVHSAMLGGFGGRRLRSAYAAAI 243

Query: 226 -----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                +  D          +     + N        IDY  +D                 
Sbjct: 244 GEGVVRGADGGSDSSVAVGKHGEPAHTNVTPGFTDCIDYVFVDDGVAVR--SAMPLPGRD 301

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
                     R SDH P+++D +
Sbjct: 302 EVATGLPDATRGSDHLPLTVDLE 324


>gi|149409019|ref|XP_001506333.1| PREDICTED: similar to Ribosomal protein S2 [Ornithorhynchus
           anatinus]
          Length = 315

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 79/285 (27%), Gaps = 30/285 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           +++ S+NI T  E               +   ++ +       DI  +QE+      AV 
Sbjct: 56  LKIASFNIRTFGE---------KKITNVTIADVIVKILNRY--DIALIQEVRDSRLTAVG 104

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+  K       +   +++      +         R + V +L         +   +   
Sbjct: 105 KLMDKLNRDSPDTYRFVVSEPLGRGSYKEQYLFVFRPEKVSLLDSYQYDDSRESFGNDTF 164

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R  + ++      ++    I         +         +L       +  W      +
Sbjct: 165 SREPMVVMFSSPSTEVKEFVIVPLH----AAPAEAVKEIDALYDVYLDIISKW------N 214

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
           +   +  GDFN   +Y+  +      +  N        +       +         D  V
Sbjct: 215 MDNILFMGDFNAGCSYVSASSWSAIRLRTNPKFQWLISDDVDTTVTSTYCPY----DRIV 270

Query: 262 MD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
              +     +   S     + +           +SDH P+ +  +
Sbjct: 271 ASGKKLRSSIGPGSAFPFHFEKAYKLKQEMALAVSDHYPVEVTIE 315


>gi|228936354|ref|ZP_04099152.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228823186|gb|EEM69020.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 337

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 35  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 94

Query: 71  LQEMGSYNAVAKVFPKNTW-----------CIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+   +  +     + +                  + +              ++   K
Sbjct: 95  LQEVDIKSMRSFDVNGHEFLKKGLSDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTFSK 154

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 155 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 204

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P+  +  
Sbjct: 205 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 264

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 265 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 322

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 323 EN----------SDHNPVSAVF 334


>gi|229496037|ref|ZP_04389761.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas
           endodontalis ATCC 35406]
 gi|229317129|gb|EEN83038.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas
           endodontalis ATCC 35406]
          Length = 334

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/329 (10%), Positives = 84/329 (25%), Gaps = 55/329 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD-- 65
           +  ++++++++N+  L +        +           + +R       + +   ++   
Sbjct: 8   ARGERIKVMTFNVENLFDTMHDEGKNDYEYLPEGANEWTRERYLRKLRNVGEVISDVGGV 67

Query: 66  --ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
               +V L E+ +   +  +          +       +       I  A+   K     
Sbjct: 68  GWPLLVGLVEVENEVVMDDLLHSTP---LGTRGYEYAITHSPDERGIDVALLYIKDLFCP 124

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
            +     +    S     +R  + +     NG  + V+ +HL S             S  
Sbjct: 125 DKVEEFQVKFPHSPHTL-SRNILYVHGHLFNGVPLHVMVVHLPSRREG------KRASDR 177

Query: 183 LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLI 235
                   L+        KE     ++ GDFN        +         +T    D + 
Sbjct: 178 KRKDVVSLLQAKCDSILNKEPGASILVMGDFNTTPRDPITHVWAHPLASRRTAYRADLMY 237

Query: 236 RFPKEKDSRC--NANKNLRNKIPIDYFVMDQNAYKFLIQESF------------------ 275
                  S     + +       ID  V+  +        ++                  
Sbjct: 238 DLTSLVPSGVIPGSYRYRGVWQQIDRIVVSGSMLLADNPITYLWESARSVMMRRWMQQDA 297

Query: 276 --SEILYNEDDIKSRGKRLSDHCPISIDY 302
                             +SDH P+   +
Sbjct: 298 DGELSPKRTYGGHFYMGGVSDHLPVVAQF 326


>gi|178743|gb|AAA58371.1| apurinic endonuclease [Homo sapiens]
          Length = 318

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              ++    +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSAKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --ASDHCPITL 314


>gi|255532760|ref|YP_003093132.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255345744|gb|ACU05070.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 621

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 70/287 (24%), Gaps = 49/287 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +     +++S+N+      +         +  T     +RQ   + + DI  +QE     
Sbjct: 52  AGESPFKVLSFNVRHNDAGD--------PQTITQRQGNIRQIIVDNNPDIFGVQEFSDDT 103

Query: 79  ---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                        +  ++ST                T      +       +  L  +  
Sbjct: 104 FKTWFRAQMATLGYGEYFSTTLTATP---------KTIFFKNSRFTLERSGTVRLGASPI 154

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             +      A  +++  N         +                S       A  L   +
Sbjct: 155 INT------ATWVVLLDNSTSNRYFISNSHW----------QFDSQPTRIANANALVAMV 198

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
             +    +P ++ GDFN K      N       D  D +                     
Sbjct: 199 NAQNTDNLPVIVFGDFNAKPGTTEINALK----DGLDVVDALGDSTGDPTFHGWTSTGTN 254

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+ +            S     +N       G   SDH P+   Y
Sbjct: 255 KIDWIM---------SDRSMGFTSWNVITTSYGGYWPSDHWPVIATY 292


>gi|315173180|gb|EFU17197.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1346]
          Length = 254

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           Q      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 QY-----PTLLMGDFNAE-SEEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|47096406|ref|ZP_00234000.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254900495|ref|ZP_05260419.1| hypothetical protein LmonJ_11794 [Listeria monocytogenes J0161]
 gi|254913554|ref|ZP_05263566.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes J2818]
 gi|254937865|ref|ZP_05269562.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900]
 gi|47015201|gb|EAL06140.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258610472|gb|EEW23080.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900]
 gi|293591565|gb|EFF99899.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes J2818]
          Length = 256

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 77/285 (27%), Gaps = 35/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +  +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++      +         P + +  S +    R
Sbjct: 54  KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     + +GK+ ++ + HL                       A  L           
Sbjct: 113 ICVWGKFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIVEN 159

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259
            P +I GDFN + +    N    K  D      +  K      +  + LR       IDY
Sbjct: 160 SPVIILGDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPLRPINELEKIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             + +          F    Y     +  G   SDH P++ + D+
Sbjct: 220 IFVSEE---------FQVCTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|241762159|ref|ZP_04760242.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260753749|ref|YP_003226642.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|283856531|ref|YP_163434.2| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373409|gb|EER63009.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258553112|gb|ACV76058.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|283775536|gb|AAV90323.2| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 264

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 86/307 (28%), Gaps = 71/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VSWNIN                   +    + ++ K    DI+ LQE  + N    V
Sbjct: 1   MRIVSWNIN----------------SVRARLAHVERFLKEEQPDILCLQETKATNG---V 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +       +             +  +A+  +      +    + + D  +    R
Sbjct: 42  FPSRFFYDLGYIHQ------AVHGQPGYNGVAILSRIAFSPAE----ITSHDWQNNQEAR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + +E     + + ++++ +   +               Q+  ++   I        
Sbjct: 92  H-IGITLENG---VRLENVYIPAGGDIPD-----RDLNPKFGQKLDFISRMIEWSSHLEQ 142

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GDFN                   +     D   +    ++ +        +    
Sbjct: 143 PTILVGDFNIAPLESDVWSHKQLLKVVSHTPIEVDHLSRLQASHNWIDLGRHFYPAPERL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +    L+            +      + SDH P
Sbjct: 203 YTWWSYRSKDWTKSDRGRRLDHMWASPSLVDHLVGH-------KVYESCRSWIKPSDHVP 255

Query: 298 ISIDYDF 304
           +  ++ F
Sbjct: 256 LLTEFSF 262


>gi|126738695|ref|ZP_01754400.1| exodeoxyribonuclease III, putative [Roseobacter sp. SK209-2-6]
 gi|126720494|gb|EBA17200.1| exodeoxyribonuclease III, putative [Roseobacter sp. SK209-2-6]
          Length = 276

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/310 (10%), Positives = 69/310 (22%), Gaps = 75/310 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--N 78
           A    L +WNIN                R   D   + +  +    D++ LQE  S    
Sbjct: 14  AMAFTLATWNIN--------------SVRLREDL--VLKLLQEEAPDVLCLQECKSPVEK 57

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              + F    +           H         +  +A+  K                +  
Sbjct: 58  IPTEGFASLGY-----------HHMVARGQKGYNGVAILSKLPLKDVGDKDFANLGHARH 106

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  V   +E     + + + ++ +    D  +   +            ++DW   +
Sbjct: 107 -------VAAELENG---VTIQNFYVPAG--GDKPDREVNEKFGQKLDYLTEMRDWFRSE 154

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDS 243
                  ++ GD N         D                    +          +    
Sbjct: 155 APKKS--ILVGDLNIAPREEDVWDHKKMLKVVSHTPIEVEHLAEVQEAGGWQDVTRADIP 212

Query: 244 RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                     +            +D+     +  +                     ++ S
Sbjct: 213 DGLLYSWWSYRAKDWDAADKGRRLDHVWATGDISQSASSS-------RILRAARGWEKPS 265

Query: 294 DHCPISIDYD 303
           DH P+   +D
Sbjct: 266 DHAPVFASFD 275


>gi|256618819|ref|ZP_05475665.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis ATCC
           4200]
 gi|256598346|gb|EEU17522.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis ATCC
           4200]
          Length = 254

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 85/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTKYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           Q      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          +S+             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KSWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|37993801|gb|AAR06976.1| sphingomyelinase [Bacillus cereus]
          Length = 252

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 82/230 (35%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSAPDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N   + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +I GD N                 +KT++ 
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNA 247


>gi|58584173|ref|YP_203189.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188579169|ref|YP_001916098.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58428767|gb|AAW77804.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188523621|gb|ACD61566.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 259

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+      D+V +QE  +  +    
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLTAFAPDVVGIQETKLEDHRFPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +   +                 +  +A+  ++  +  Q          F    
Sbjct: 45  AALAELGYRSVFC------------GQKTYNGVAILSRSPALDVQ-----MGIPGFDDVQ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +      DWI Q+ ++
Sbjct: 88  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQT 136

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246
               V+ GDFN   +    +D         +   D            L    +       
Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALEKLLAMGLHDAFRLHTQDAE 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        ++          D      +R SDH P
Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249

Query: 298 ISIDY 302
             +  
Sbjct: 250 AWVRL 254


>gi|310823846|ref|YP_003956204.1| hypothetical protein STAUR_6620 [Stigmatella aurantiaca DW4/3-1]
 gi|309396918|gb|ADO74377.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 397

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 74/279 (26%), Gaps = 54/279 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +++NI                    S    +         D+V LQE+      +  
Sbjct: 1   MRFMTYNI---------------KHAELSSLEAIASVINAQAPDVVALQEVDVLTVRSNR 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +       +           S +     +A+  +      Q  PL  A +        
Sbjct: 46  VDQAARLGQLTGLSHAFIPSLTSYDSGQYGLAILSRYPIRSAQRLPLRSAAEQR------ 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V  L E+      ++ + +  F    +         +   QQA+ +K  +        
Sbjct: 100 --VLALFEVELAPSRLIPVGVTHFGTTGA---------TERVQQAEDIKAALA----GKP 144

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++ GD N   +    +    +  D         +        +        IDY ++ 
Sbjct: 145 WALLGGDLNASPSESSISSLLQQFTDAWA------RGGSGSGYTHSATLPTKRIDYVLLG 198

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +    + S +              SDH P++   
Sbjct: 199 SA---WTSPLTASVVNAPSQ---------SDHRPLAATL 225


>gi|146304199|ref|YP_001191515.1| exodeoxyribonuclease III Xth [Metallosphaera sedula DSM 5348]
 gi|145702449|gb|ABP95591.1| exodeoxyribonuclease III Xth [Metallosphaera sedula DSM 5348]
          Length = 248

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 84/303 (27%), Gaps = 79/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N L    G                 L    K  + DI+  QE+ S   +   
Sbjct: 1   MKILSWNVNGLKAILGKG---------------LLDLVKKQEYDILMFQEVKSSQ-LPID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  +    +   +          +      +   +  +     G  D    +  R
Sbjct: 45  FQLLPYRSYLYPAKKKGY----------SGTLTLTRIEPISAK----YGIGDEEFDSEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K++V++++  +     + E        L   Q      +    K    
Sbjct: 91  -----VIALEFQKVYVINVYFPN-----AGEELKRLDFKLRFNQ-----RFHEFVKNLGK 135

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTI-------DPNDSLIRFPKEKDSRCN-------ANK 249
           P VI GDFN     +                 +                           
Sbjct: 136 PCVICGDFNVAHEEIDIARPKDNVNHAGFTPEERKWFHEFLASGFVDTFRIFVKEGGHYS 195

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY V+ +   K + +    E +             SDH P+++
Sbjct: 196 WWSYRFHAREKNIGWRIDYCVVSKELEKHVKKAEILEKV-----------MGSDHAPVTL 244

Query: 301 DYD 303
           + D
Sbjct: 245 ELD 247


>gi|167742958|ref|ZP_02415732.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 14]
          Length = 292

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               +++R+ ++NI+                 T S    +      L AD++ LQE+   
Sbjct: 1   QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPLG 49

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A           +   T                   AV  +      +   L     SF
Sbjct: 50  GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 101

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A++  +E     + V+  HL               S +  S Q   L   +  
Sbjct: 102 GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 145

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                +P ++ GD N         + F +       +  F +    R            +
Sbjct: 146 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 194

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +     ++L+  +                   DH P+    
Sbjct: 195 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 229


>gi|29293902|gb|AAO63565.1| RNA editing complex protein MP100 [Trypanosoma brucei]
          Length = 902

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 87/299 (29%), Gaps = 35/299 (11%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            V   ++L++WN+         +          +   Y ++ +  +  DAD+V +QE+  
Sbjct: 613 PVKASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVIAKIIEEEDADVVGMQEVE- 671

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                       +  F S   LI      S   +  AIA     + + ++  P+      
Sbjct: 672 ----------PVFWEFLSKRALIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYL 721

Query: 137 FSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
              A          + +++    + +   HL +           S   +L     + L  
Sbjct: 722 NVPAWTNHVSLMPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTL-- 779

Query: 194 WITQKKESLVPFVIAGDFNRKIN------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                       V  GDFN          +     D W  + PN+       E ++ C  
Sbjct: 780 -------GGGDVVTMGDFNDWPTNEFIMPHESQYVDCWPVLHPNNPGKTM-DETNTFCKL 831

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                     D   +       +          N+++  +        SDH  +SI + 
Sbjct: 832 KVEEMFFGRSDKVFLRSRRLVPVEAHLVGTRSVNDENNNADAPAYLFPSDHYGVSITFS 890


>gi|78355598|ref|YP_387047.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218003|gb|ABB37352.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 336

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 78/303 (25%), Gaps = 74/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+L SWN+N          W                +    DAD++ LQE        K 
Sbjct: 82  VKLYSWNVNGFRAIRQKPDW---------------DWFSGCDADVIGLQE-------TKA 119

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+       +     ++    +    ++ +A   +   +               +   R
Sbjct: 120 MPEQIDPADRNPAGYHSYWLGATVKKGYSGVAAFSRREPLSVA----YDLPVEQYQGEGR 175

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +  +I+  +    D              + AQ L+           
Sbjct: 176 -----VIMLEYDAFYYFNIYFPNGQSGDERLQYKLGFYDAFLEHAQTLRR--------KK 222

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GDFN                   +L     +      +  +  F           
Sbjct: 223 PIVVCGDFNTAHRPVDLARPRENEGTSGFLPVERAWMDKFIDHGYVDTFRLVHPDAQAMY 282

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +       +   +    ++            SDHCP+ 
Sbjct: 283 SWWSYRFKARDRNVGWRIDYFFVSDELRHAVKDATIEMEVF-----------GSDHCPVG 331

Query: 300 IDY 302
           ++ 
Sbjct: 332 LEL 334


>gi|330834656|ref|YP_004409384.1| exodeoxyribonuclease III Xth [Metallosphaera cuprina Ar-4]
 gi|329566795|gb|AEB94900.1| exodeoxyribonuclease III Xth [Metallosphaera cuprina Ar-4]
          Length = 256

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 82/305 (26%), Gaps = 82/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N+L                ++    L +  K+ + D++  QE+ +   +   
Sbjct: 8   LKILSWNVNSL---------------KSAIAKGLMEIIKSEEYDVLMFQEIKTNQ-LPLD 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  + +  +             ++      +   +           D   R    
Sbjct: 52  FQSLPYRAYINPSKQK---------RGYSGTLTLTRIEPISVTYGIGKEEFDVEGR---- 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    K ++V++++  +        +          +    L            
Sbjct: 99  -----VISTEFKSMFVINVYFPNAGEGLKRLDFKLRFNRAFQEYVASL----------GK 143

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P VI GDFN                           F + +      +   +        
Sbjct: 144 PSVICGDFNVAHEEIDIARPKDNVNHAGFTPEERKWFHEFLLSG--FVDTFRLFVKEPGH 201

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY V+ +     + +    E +             SDH P+
Sbjct: 202 YSWWSYRFHAREKNIGWRIDYCVVSKELESKVKKAEILEKV-----------MGSDHAPV 250

Query: 299 SIDYD 303
           +++  
Sbjct: 251 TVEIS 255


>gi|84625943|ref|YP_453315.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84369883|dbj|BAE71041.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 259

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+      D+V +QE  +  +    
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLTAFAPDVVGIQETKLEDHRFPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +   +                 +  +A+  ++  +  Q          F    
Sbjct: 45  AALAELGYRSVFC------------GQKTYNGVAILSRSPALDVQ-----MGIPGFDDVQ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +      DWI Q+ ++
Sbjct: 88  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQT 136

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246
               V+ GDFN   +    +D         +   D            L    +       
Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALEKLLALGLHDAFRLHTQDAE 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        ++          D      +R SDH P
Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249

Query: 298 ISIDY 302
             +  
Sbjct: 250 AWVRL 254


>gi|283833916|ref|ZP_06353657.1| endonuclease/exonuclease/phosphatase family protein [Citrobacter
           youngae ATCC 29220]
 gi|291070588|gb|EFE08697.1| endonuclease/exonuclease/phosphatase family protein [Citrobacter
           youngae ATCC 29220]
          Length = 253

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 79/282 (28%), Gaps = 46/282 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---- 83
           S+N+ T++  +G + +             LR+  + + ADIV LQE+   + V  +    
Sbjct: 9   SFNVLTINTHKGFTAFNRRF-----ILPELREAVRTVGADIVCLQEVLGAHEVHPLHVEN 63

Query: 84  FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +P  T   F +     +  + +       H   AV  +                S   + 
Sbjct: 64  WPDTTHYEFLADTMWSDFAYGRNAVYPQGHHGNAVLSRYPIE-----HFENRDVSVGASE 118

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +   +        V  + +                 +    Q   L DW+      
Sbjct: 119 KRGVLYCRIVPPMLSHPVHVMCVHLGLR-----------EAHRQAQLAMLADWVNA-LPE 166

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKIPIDYF 260
             P V+AGDFN               +  N  L   F +               + +D  
Sbjct: 167 GEPVVVAGDFNDW------RQKANHPLKANADLDEIFTRAHGRPARTFPVQFPLLRLDRI 220

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +                           + LSDH P+S + 
Sbjct: 221 YVKNANAS-----------TPTALALRHWRHLSDHAPLSAEI 251


>gi|265767421|ref|ZP_06095087.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263252726|gb|EEZ24238.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 608

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 89/305 (29%), Gaps = 67/305 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK +L L   L   +A     +RL+++N+   +  +G+            +Y  +    
Sbjct: 1   MRKLLLLLFSALFVLSAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVI 49

Query: 62  KNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   DIV +QE+ S  A +    V  +                     +     I +  
Sbjct: 50  NNARPDIVAIQELDSMTARSNRTDVLKELAERTQLHPCFAPAID----YDGGKYGIGILS 105

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +  Q++ L G      R   R  +         +      HL              
Sbjct: 106 KETPLRVQTFALPG------REEARTLLVAEFP----EYVFACTHLSLTEED-------- 147

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIR 236
                   + + L+   +   ++  PF +AGDFN   +     D    ++ +        
Sbjct: 148 --------RMKSLEILKSVAADTRKPFFLAGDFNSDADSGFIKDLKSTFQILS------- 192

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                            K  +DY +  +      +  S   I              SDH 
Sbjct: 193 ---NPKQPTYPAS--EPKETLDYLIALKQETPTFVVNSARVI---------DEPLASDHR 238

Query: 297 PISID 301
           P+ ++
Sbjct: 239 PLLVE 243


>gi|302382037|ref|YP_003817860.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192665|gb|ADL00237.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
          Length = 257

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 79/302 (26%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN ++                     L ++      D+  LQE+ +       
Sbjct: 1   MRIATFNINGINS----------------RLPNLLEWLAGTQPDVACLQELKAPQD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  ++   +     L G +         
Sbjct: 41  ------RFPEGAIEEAGYHAAWVGEARWNGVAILSRHGPPVVTRRALPGDRKDVQSRYLE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV          + V  ++L +       +  Y  +        + L        ++  
Sbjct: 95  AAV--------NGVLVGCLYLPNGNPQPGPKFDYKLA------WFERLIAHAGTLFDTEA 140

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+AGD+N         D                 F + +D   +     +        
Sbjct: 141 PVVLAGDYNVVPTEADIYDSRSWKKNALLQPESRAAFARMLDDGWTDALRERFPHEAVYT 200

Query: 248 NKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +             ID+ +++  A   L+           D      ++ SDH P  I
Sbjct: 201 FWDYLRDGWSRNAGLRIDHLLLNPQAAGRLVDAGV-------DAGVRGREKASDHAPAWI 253

Query: 301 DY 302
           + 
Sbjct: 254 EL 255


>gi|257877428|ref|ZP_05657081.1| exodeoxyribonuclease [Enterococcus casseliflavus EC20]
 gi|325568814|ref|ZP_08145107.1| exodeoxyribonuclease III [Enterococcus casseliflavus ATCC 12755]
 gi|257811594|gb|EEV40414.1| exodeoxyribonuclease [Enterococcus casseliflavus EC20]
 gi|325157852|gb|EGC70008.1| exodeoxyribonuclease III [Enterococcus casseliflavus ATCC 12755]
          Length = 250

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 80/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +  + LDAD   LQE          
Sbjct: 1   MKFISWNVNGLRAIVKKNF---------------SEVFEALDADFFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +  +    +   D+  R    
Sbjct: 45  LDLPGYHQYWNYAEKKGY----------SGTAIFAKEPALSVRYGLGIEEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +                           ++  + +   
Sbjct: 91  -----VITLEYPEFFLITCYTPN-------SQNELRRLDYRMTWEDAFLAYL-TELKQQK 137

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +   +                 + T+        F           
Sbjct: 138 PVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREKFSTLLAAGFTDTFRYFYPDAEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+  +  + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFVVSDDLNERLLDAKIHTDII-----------GSDHCPVE 246

Query: 300 IDYD 303
           +D +
Sbjct: 247 LDLN 250


>gi|163760748|ref|ZP_02167828.1| Endonuclease/exonuclease/phosphatase family protein [Hoeflea
           phototrophica DFL-43]
 gi|162282070|gb|EDQ32361.1| Endonuclease/exonuclease/phosphatase family protein [Hoeflea
           phototrophica DFL-43]
          Length = 368

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/365 (12%), Positives = 111/365 (30%), Gaps = 84/365 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRT------------TSDYTLLRQY---------- 60
            VR+ ++N   L  +   S ++N +++                   + +           
Sbjct: 2   TVRIATFNAENLLSRFDFSGFRNELRQDRVAQLYDFSSEEQYRQAEIARAVSLTDDTRQM 61

Query: 61  ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                   DADI+ LQE+ + + + +      + +     R       + +  I+ A+  
Sbjct: 62  TALAIAEADADILCLQEVENLDTLHRFEYGYLFKMIGDGYRHKVLIDGNDSRGINLALMA 121

Query: 117 RKK------NVRVLQQSY-------------PLLGAKDSFSRAGNRRAVELLVEINGKKI 157
           R++         +   S+              L G      +   R  +E+ V+I  K++
Sbjct: 122 RERTLDGAKIEILEVTSHAHLTYDAAGLYSPDLEGMAHPNDKLFKRDCLEVDVKIGPKRL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFN-- 212
            +  +H KS     +  +  + +  +   +A+ ++  I+ +         +VIAGDFN  
Sbjct: 182 TLYVVHFKSMGSPRNGLDGRTHTMPVRVAEARAVRKLISDRFGADGGGKRYVIAGDFNDY 241

Query: 213 -----------RKINYLGN--NDDFWKTIDPNDSL-IRFPKEKDSRCNA-NKNLRNKIP- 256
                         ++      D   + +  +        +  +            +   
Sbjct: 242 SEKLVITGDRRHGYHFTPEQAEDGAVRVLTADGFAENVVTRRPEMDRWTLYHTRGPQERH 301

Query: 257 ---IDYFVMDQNA---------------YKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +DY +                      +       + +           + SDHCP+
Sbjct: 302 LCQLDYLLASPALTRSNRDRLPDIIRAGQPWRTLFPQGQEVERYPRTGWDRPKASDHCPV 361

Query: 299 SIDYD 303
           ++ +D
Sbjct: 362 AMTFD 366


>gi|325299788|ref|YP_004259705.1| exodeoxyribonuclease III Xth [Bacteroides salanitronis DSM 18170]
 gi|324319341|gb|ADY37232.1| exodeoxyribonuclease III Xth [Bacteroides salanitronis DSM 18170]
          Length = 251

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 79/301 (26%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                       R     L+AD   LQE     A    
Sbjct: 1   MKLISWNVNGLRACCDKGF---------------RDAFTRLNADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++      +S                       +  PL  +        +R
Sbjct: 45  LAFDGYTSYWNYAEKKGYSGTAIFT-----------------RHQPLNVSYGMGIDEHDR 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E+     +++ ++  +                         + ++ +  ++  
Sbjct: 88  EGRVITLEMEN--FYLVTVYTPN-------SQDGLKRLDYRMTWEDAFRRYLLE-LDAKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + ++T+     +  F      +    
Sbjct: 138 PVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQTLLDAGFIDTFRYFYPEQEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+        L   +    ++            SDHCP+ 
Sbjct: 198 SWWSYRFRAREKNAGWRIDYFLASARLAGKLESAAIHTEIF-----------GSDHCPVE 246

Query: 300 I 300
           +
Sbjct: 247 V 247


>gi|315502756|ref|YP_004081643.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|315409375|gb|ADU07492.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 265

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/296 (10%), Positives = 65/296 (21%), Gaps = 52/296 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WNI T     G +               +         D++ LQE         +
Sbjct: 2   LRVMTWNIRTGGRDAGGT----------DRRDRIVSVVTAQRPDVLALQE---------L 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +    +      S      A+ VR     +               R  + 
Sbjct: 43  RGMDATLGGLAGRLGMTPYLARSCFGQPVAVLVRPPLRVLRAGRVR---------RPFHH 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--QAQWLKDWITQKKES 201
            A  + V      + V   HL  +            + +L     +   L   +   + +
Sbjct: 94  AAARVQVATGAGPLTVFSTHLNPYSGGRRRMEADWLAAALRRTGGELALLAGDLNTLEPT 153

Query: 202 LVPFVIAGDFNRKINYLGNNDDFW-------KTIDPNDSLIRFPKEKDS-------RCNA 247
                                D           +     +  +P+               
Sbjct: 154 ADHTARLAGLATPYRRRHLRRDGRTVDTRAVARLLDAGLVDLWPRSGGDEPGGLTVPTRH 213

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  + +DY +                +              SDH P+  + D
Sbjct: 214 GGAEFAGMRLDYLLASPALADR--------VRAVRVVRDGDADSASDHYPVLAEVD 261


>gi|294676364|ref|YP_003576979.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacter
           capsulatus SB 1003]
 gi|294475184|gb|ADE84572.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacter
           capsulatus SB 1003]
          Length = 342

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 95/342 (27%), Gaps = 61/342 (17%)

Query: 24  VRLVSWNINTLSE----QEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+  +N+   +     +  +        R           L      L+AD + + E  
Sbjct: 1   MRIACYNVEWFTALFDRRGRMLEDAEESGRYGVTRAEQLGALGIVFTALEADCILIVEAP 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             N   K  P           R        +N+      A+   +V  L        A  
Sbjct: 61  DDNTRRKTVPMLEAFAAKFGLRQRRAVMGFANDTQQEIAALYDPDVLRLWHDPAEGSATA 120

Query: 136 SFSR----------------AGNRRAVELLVEI-----NGKKIWVLDIHLKSFCFLDSLE 174
                                 ++  +EL +E+      GK + ++ +HLKS     + +
Sbjct: 121 PRFDLSLKIDLDIDDRLDTVHFSKPPLELQLEVLTGPAAGKLLRLIGVHLKSKAPHGATD 180

Query: 175 NTY--SPSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--- 226
                  +     +Q      L+  + +  ++    ++ GDFN           F +   
Sbjct: 181 PASGVRLAIENRRKQLAQCLWLRRRVDEVLDAGESLIVLGDFNDGPGLDEYEALFGRSGL 240

Query: 227 TIDPNDSLIRFPKEKDSRCN-------------------ANKNLRNKIPIDYFVMDQNA- 266
            I          +  D                                 +DY  +  +  
Sbjct: 241 EIVLGTGGPPARQLHDPHARLPRGKTTALPASARFFIPEPPPGQFFSAMLDYIALSPDLC 300

Query: 267 ---YKFLIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYDF 304
               K+ I   F +   Y   +++    + SDH P+S+D  F
Sbjct: 301 AHAPKWRIWHPFDDPGCYRVAELREALLQASDHFPVSVDLAF 342


>gi|282877586|ref|ZP_06286401.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281300158|gb|EFA92512.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 316

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/337 (9%), Positives = 86/337 (25%), Gaps = 58/337 (17%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTT 51
             Y+L+L+               +V  N   L +    S+  +           + +R  
Sbjct: 1   MTYLLSLLL----------GVFTVVELNCENLFDCRHDSMKHDEQFLPSSDYHWTPRRYW 50

Query: 52  SDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
                + Q   +           D+V L E+ + + +  +  ++        +    +  
Sbjct: 51  QKVNRIGQTILSCGESDEGWSLPDLVALCEVENDSCLVDLTKRS-----LLRKARYEYVM 105

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDI 162
             S ++    +A+              +           R  +     ++ +  + V  +
Sbjct: 106 THSPDERGIDVALLYSPFSFQLLQSYSIRIHPMKEMRPTRDILYAKGRVSLRDTLHVFVV 165

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           H  S    +     +         Q    L+        +    ++ GDFN         
Sbjct: 166 HAPSRTAGERPTRAHRRLVINRLLQSVDSLRAL-----SAHPHVLLMGDFNDYSKDENIR 220

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY- 280
                 +                    +   +   +D+ ++D++  + L++    +  + 
Sbjct: 221 QLTEHGLVDVSQQAVGTHGARG---TYRYRGDWGSLDHIMVDEHTAQRLVECHVHDAPFL 277

Query: 281 -------------NEDDIKSRGKRLSDHCPISIDYDF 304
                                    SDH P+     +
Sbjct: 278 LKEDEKYGGVQPRRNYLGPRYQNGFSDHLPLVARLRW 314


>gi|221104337|ref|XP_002156804.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 506

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/289 (11%), Positives = 81/289 (28%), Gaps = 15/289 (5%)

Query: 23  KVRLVSWNIN-----TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
             R++ WNI        +E E                 L+ ++   L+  ++ LQE+   
Sbjct: 225 SFRVLQWNILAQGLTYSTETENFCKVPCQFLEWDHRSKLIMEHIDTLNPHVICLQEVDHF 284

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +          +  F++ +         +N     A+  + +   +  +   +    D 
Sbjct: 285 DDFFVPCLIPKGYRGFFAPKLDSPCFNFPNNGPDGVALFYKSERFLL--KDLVISYLNDG 342

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             +   +  +  ++E       ++                 + +   ++     L     
Sbjct: 343 NEKEKKQAILACVLEDKITCQCIIIAVTHLKAKDGFEMQRVAQANDCINVIESMLNKH-- 400

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNKI 255
                    +  GDFN + N   ++      I+  + L     +          +   K 
Sbjct: 401 ----KNSSVIWCGDFNSEENEECHSRIKEAKINVKNVLNELSSKMSFTTWKRRPDSEKKQ 456

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            IDY       +         + +    +        SDH  + +D+ +
Sbjct: 457 VIDYIFYSSEYFSPENVLLPPDEVDIPTERFPSFNHPSDHISLCVDFSY 505


>gi|148255197|ref|YP_001239782.1| exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1]
 gi|146407370|gb|ABQ35876.1| Exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1]
          Length = 256

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 73/303 (24%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                        L  + ++   DIV LQE+    A    
Sbjct: 1   MKIATFNINN----------------VRRRLPNLLSWLRSARPDIVCLQELKCAQA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  +    +     L GA    +    R
Sbjct: 41  ------EFPADAIATAGYGAVWQGQKTWNGVAILARKAEPVLIRTALPGAP---ADKEAR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + I +  ++L +       +  Y  +        + L        E  +
Sbjct: 92  YIEAAV-----RGIVIGCLYLPNGNPQPGPKFDYKLA------WFKRLHRHAADFIEHDL 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N     L                     +K +               +    
Sbjct: 141 PVVLAGDYNVAPTPLDIYPTRSWNKDALIQPSSRAAFKALLDQGWCDAIRTLHPDQPMFT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+ ++       L +          D         SDH P  I
Sbjct: 201 FWDYKRNRWPRDAGLRLDHLLLSPQLAPRLTKAGI-------DRAIRGEAGASDHAPAWI 253

Query: 301 DYD 303
              
Sbjct: 254 VLT 256


>gi|312898827|ref|ZP_07758215.1| exodeoxyribonuclease III [Megasphaera micronuciformis F0359]
 gi|310619989|gb|EFQ03561.1| exodeoxyribonuclease III [Megasphaera micronuciformis F0359]
          Length = 250

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 69/304 (22%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                        +  K LDADI  LQE     A    
Sbjct: 1   MKFISWNVNGLRAVMKKGFP---------------EIFKELDADIFCLQETK-LQAGQIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  +   +       +   D   R    
Sbjct: 45  MDLPGYEQYWN----------YADKKGYSGTAIFTRIKPLSVSYGMNIDEHDHEGRL--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  + +  +  +     +  +               L            
Sbjct: 92  ------ITLEFEDFYFITCYTPNSQSELARLDYRMRWEDDFRNYVTELNR--------TK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                              +        +      +    
Sbjct: 138 PVIFCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKMTELLAAGFTDTWRYFYPDKEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+        L +                    SDHCP+ 
Sbjct: 198 SWWSYRFKARQNNSGWRIDYFITSSALDSRLKEALI-----------YTNIEGSDHCPVG 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 LVIE 250


>gi|159487062|ref|XP_001701554.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158271495|gb|EDO97312.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 1288

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 89/335 (26%), Gaps = 70/335 (20%)

Query: 23   KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGSYNAV 80
             V + S N+  LS  +             S +  +           DI+ + E+   N  
Sbjct: 908  TVTIGSLNVENLSPADP-----------PSKFARIADAVVKGLRSPDILGVAEVQDNNGP 956

Query: 81   AK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                                     T+ ++     + N        +I   +        
Sbjct: 957  TDTGVVAADVTLGLLISAIQAAGGPTY-VYLQINPVNNLDGGQPGGNIRQVLLYNPAVAT 1015

Query: 123  VLQ----------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                                     +  P      + +   +R+ + + + +NG+ ++V+
Sbjct: 1016 PANLPAGGSTDANAVISTATGQPQLKYSPGRLDPTNPAFQSSRKPLAVQLTVNGQPLFVI 1075

Query: 161  DIHLKSFCFLDSLENTY----------SPSCSLLSQQAQWLKDWITQKK--ESLVPFVIA 208
              HL S   L S                 S    +QQA  L  +++Q    E     V+ 
Sbjct: 1076 VNHLNSKASLPSCGGDQPLFGRNQPPARSSEVQRAQQASILAGFVSQILALEEQSRVVVM 1135

Query: 209  GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR---CNANKNLRNKIPIDYFVMDQN 265
            GD N           +   +     L        +      +     N   +D+ ++  +
Sbjct: 1136 GDLNDFAGSSALGVLYASGLTNAYLLPEQSGLLRTPPNQRYSYNFEGNAQALDHILLSPS 1195

Query: 266  AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                             DD  S G R SDH P+ +
Sbjct: 1196 LVGGAEVGVLHVNSEFADDAAS-GTRFSDHDPLMV 1229



 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/335 (10%), Positives = 83/335 (24%), Gaps = 68/335 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGSYNAVA 81
           V + S N+  LS  +             S +  +           D+V + E+   +   
Sbjct: 297 VTIGSLNVENLSPADP-----------PSKFARIANAVVKGLRSPDLVGVCEIQDNSGPT 345

Query: 82  KVF-----------------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
                                      +       N    +   +I   +         +
Sbjct: 346 DDLVVDAAITITTLLAAIRDAGGPAYAYLQVNPENNQDGGEPGGNIRQILLYNPAVATAV 405

Query: 125 QQSYPLLGAKDSF----------------------SRAGNRRAVELLVEINGKKIWVLDI 162
                     +                        +   +R+ + + + +NG+ ++V+  
Sbjct: 406 GLPAACPSTPNEVVADANGKPQLKYSPGRLAPSNIAFQSSRKPLAVQLTVNGQPLFVIVN 465

Query: 163 HLKSFCFLDSLENTY----------SPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGD 210
           H  S     +                 S    ++QA+ +   ++Q    ++    V+ GD
Sbjct: 466 HFNSKASPPASGGDQPLFGRNQPPARSSEVQRAKQAEVVAGAVSQILALDAQARVVVMGD 525

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR---CNANKNLRNKIPIDYFVMDQNAY 267
            N           +   +     L        +      +     N   +D+ ++  +  
Sbjct: 526 LNDFAGSSALGVLYASGLTNAYLLPEQSGLLRTPPNQRYSYNFEGNAQALDHILLSPSLV 585

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                          DD  +   R SDH P+ +  
Sbjct: 586 GGAEVGVLHVNSEFADDAPAST-RFSDHDPLLVRL 619


>gi|312899298|ref|ZP_07758633.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0470]
 gi|311293546|gb|EFQ72102.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0470]
          Length = 254

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 84/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+   +E +    W             + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVRVDTEYDQDWQWFFRK-------EAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVKAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           Q      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 QY-----PTLLMGDFNAE-SEEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|94497212|ref|ZP_01303784.1| metal-dependent hydrolase [Sphingomonas sp. SKA58]
 gi|94423317|gb|EAT08346.1| metal-dependent hydrolase [Sphingomonas sp. SKA58]
          Length = 232

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 57/284 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R+ S+NI      +   +              + +    +DADI+ LQE      V 
Sbjct: 2   KTIRVASYNIRKAIGTDRRRIP-----------ERVLEVLGEVDADIIALQEADRRFGVR 50

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                       S  + +  + +  +   H  AI VRK+    +     L          
Sbjct: 51  SAAIPPLLLDMLSGYKSVPLNIQTDSMGWHGNAILVRKEAEIGVHDVLHLPYL------- 103

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A    +      + V  +HL                 S L ++ Q         + 
Sbjct: 104 EPRGATMAEITAKDITVRVFGMHL---------------DLSGLWRRRQAAAVIHAAAQG 148

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNKIPIDY 259
             +P ++ GD N                +             + C  +    R    +D 
Sbjct: 149 ESLPTILMGDLNEWSA------------NGGCLADFGRHYSFAPCGRSFHARRPVARLDR 196

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +        L      E         +  ++ SDH PI  ++ 
Sbjct: 197 IMHCSQLT--LKTCGVHE--------SAAARKASDHLPIWAEFS 230


>gi|124265241|ref|YP_001019245.1| hypothetical protein Mpe_A0048 [Methylibium petroleiphilum PM1]
 gi|124258016|gb|ABM93010.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 256

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 77/257 (29%), Gaps = 40/257 (15%)

Query: 54  YTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107
              LR   + + AD+VFLQE+        A++        +     S      + +    
Sbjct: 32  LHELRDAVRTVGADVVFLQEVQGTHERHTARLANWPAVPHYEFLADSIWPQFAYGRNAVY 91

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
              H   AV  K   +  ++  +  +         R  +  ++++ G+   V  + +   
Sbjct: 92  PHGHHGNAVLSKFPILRHENLDVSISG-----PERRGLLHCVLQLPGRSANVHAVCVHLG 146

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         S  S+Q   L + + ++  +  P V+AGDFN             + 
Sbjct: 147 L-----------QESHRSRQLALLCELVEREVPADAPLVVAGDFNDW------RRSAHRV 189

Query: 228 IDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
           ++    L                     + +D   +   A           +       +
Sbjct: 190 LEHRAGLREVFLHSGGTSARTFPARFPMLQLDRIYVRNAA-----------VHAPMVLPR 238

Query: 287 SRGKRLSDHCPISIDYD 303
                LSDH P++ +  
Sbjct: 239 RPWSHLSDHAPLAAEIS 255


>gi|332524529|ref|ZP_08400736.1| endonuclease/exonuclease/phosphatase [Rubrivivax benzoatilyticus
           JA2]
 gi|332107845|gb|EGJ09069.1| endonuclease/exonuclease/phosphatase [Rubrivivax benzoatilyticus
           JA2]
          Length = 251

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 81/286 (28%), Gaps = 48/286 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77
            +R+++ N +                        LR   +++DAD+VFLQE+        
Sbjct: 6   PIRVLTVNTHKGFTALNRRFV----------LDELRDAVRDVDADLVFLQEVHGTHCRQS 55

Query: 78  NAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           + VA+      +            + +           A+  K   V   ++ +      
Sbjct: 56  DHVARWPQAPHYEFIADALWPQFAYGRNAVYPHGDHGNALLSKYPIVAHANHDVSVDGH- 114

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   +      + V  + +               + +   +Q + L + + 
Sbjct: 115 ----EARGLLHCTLHRPADGMRVHAVCVHLGL-----------AEAHRRRQLEQLCELVR 159

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           ++     P V+AGDFN   +         +       +      + +R    +       
Sbjct: 160 REVPDDAPLVVAGDFNDWRDRA---HPVLERGLGLSEVFVQAHGRSARTFPARWPLL--R 214

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +        +              +     LSDH P++ + 
Sbjct: 215 LDRIYVRNTRGHRPLPLP-----------RRPWAHLSDHAPLAAEI 249


>gi|254293701|ref|YP_003059724.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814]
 gi|254042232|gb|ACT59027.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814]
          Length = 259

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 80/303 (26%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N                   +    + +  KNL+ D+V  QE+   +     
Sbjct: 1   MKIASWNVN----------------SVNARLPTVLEVLKNLELDVVCFQEIKCIDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + ++        +  +A+  K+     Q    +G          R
Sbjct: 41  ------NFPRLEIEDMGYNIITHGQKSYNGVAILSKHPIEDVQ----IGLPGDDEDDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +    + V  I+L +       +  Y  +          L     +      
Sbjct: 91  YIEA--LIMGETPVRVASIYLPNGNPFPGPKFDYKLA------WMDRLNARAKELLSYEE 142

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
             V+AGD+N         D        +   +                   +D+R +   
Sbjct: 143 AVVLAGDYNCIPRDEDCYDPAAWVDDALAQPETRGKFRELQWMGYTEGFAARDNRGHQYT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ +    A   L   S                + SDH PI  
Sbjct: 203 FWDYQAGAWQKDNGIRIDHLLCSPQAADKLKSVSI-------YKDARGMTKPSDHVPIIG 255

Query: 301 DYD 303
           +++
Sbjct: 256 EFE 258


>gi|28572478|ref|NP_789258.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27]
 gi|28410610|emb|CAD66996.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27]
          Length = 279

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 72/305 (23%), Gaps = 61/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  + KN   D+  LQE          
Sbjct: 1   MRVGTWNVN----------------SIRARLERVLAWLKNECIDVAALQETKVRTG---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +            +A+  +                   R G  
Sbjct: 41  ------DFPVDAFRDAGYYSEAHGLRGFEGVAIVSRFPIRRVTVNIPRAPGFLSDRWGTD 94

Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-- 200
              E   +      I +  +++ +   + S    Y  +        + L   +       
Sbjct: 95  IPQEARAISATTGGIRLYSLYVPNGREVGSPHFEYKLA------WLKALASHVRTVLRRT 148

Query: 201 SLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             +P ++ GDFN                  I   G   + ++ I                
Sbjct: 149 PGIPLMLVGDFNIVTCEQDTADPDFQLPNDITCSGPEREAFQAILDTGMFDLIRPFAPIG 208

Query: 245 CNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
             +    R +        ID+ +   +  +  I                 G   SDH P+
Sbjct: 209 FTSWSYQRQRFQNNQGLRIDFMLGSDSVQRRTIWGEID----RVQRRHLFGLTPSDHAPL 264

Query: 299 SIDYD 303
               D
Sbjct: 265 VSVID 269


>gi|312140778|ref|YP_004008114.1| exodeoxyribonuclease iii [Rhodococcus equi 103S]
 gi|325675582|ref|ZP_08155266.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707]
 gi|311890117|emb|CBH49435.1| exodeoxyribonuclease III [Rhodococcus equi 103S]
 gi|325553553|gb|EGD23231.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707]
          Length = 275

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 68/278 (24%), Gaps = 54/278 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           +    L  +     AD+V LQE           + P        ++           +  
Sbjct: 24  AARKGLIDWLAGSQADVVCLQETRASDKQLHETLAPALDQGWHVASAE--------PSAK 75

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +AV  +      +    +G  D       R      +E +   + V  ++L +   
Sbjct: 76  GRNGVAVLSRRPADAVR----IGFGDDEFADAGRY-----IEADFDALTVGSLYLPTG-- 124

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------ 217
            ++           ++  A  L         +    ++ GD+N                 
Sbjct: 125 -EAETPKQEQKERFMASFAAHLSASAEAAVAAGRDVLVCGDWNIAHTERDIKNWKGNVKK 183

Query: 218 ----LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQ 264
                G  D     +     +    +              +           IDY +   
Sbjct: 184 SGFLPGERDWVGALLAGGAWVDVVRELHPDVDGPYSWWSYRGKAFDTDAGWRIDYHLTTP 243

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                             +   +  +R SDH P+++ +
Sbjct: 244 GLAARAK-------EARVERAATYAERWSDHAPVTVQF 274


>gi|282911587|ref|ZP_06319387.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282324596|gb|EFB54908.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|312437570|gb|ADQ76641.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 280

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 81/276 (29%), Gaps = 28/276 (10%)

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-------- 96
           +  +   +D      Y K  + D+V   E     A  K+         Y T         
Sbjct: 10  HWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSG 67

Query: 97  RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                    S       +A+  K     +  +        F    N+  V   +E NGK 
Sbjct: 68  WDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKN 126

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKI 215
           + V+  H +S    DS          + ++Q + + D++ +          I GD N   
Sbjct: 127 VHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN- 181

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK-- 268
                  D  K ++ ND L                  N        +DY   D++  +  
Sbjct: 182 KGTEEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPK 241

Query: 269 FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
            L+ E  +E     D        +    SDH PI  
Sbjct: 242 QLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 277


>gi|188588613|ref|YP_001921245.1| exodeoxyribonuclease III [Clostridium botulinum E3 str. Alaska E43]
 gi|188498894|gb|ACD52030.1| exodeoxyribonuclease III [Clostridium botulinum E3 str. Alaska E43]
          Length = 251

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 80/300 (26%), Gaps = 78/300 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L                           K  +ADI  +QE         + 
Sbjct: 3   KLISWNVNGLRACVKKGF---------------LDILKESNADIFCIQESKLQEGQIDLN 47

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +  +  +             +    ++  AV  K   +       LG          R 
Sbjct: 48  LEEYYDYW-----------NYAEKKGYSGTAVFSKEKPLNIS----LGIGIEEHDKEGR- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +  ++ ++++++  +     +  +      +        L             
Sbjct: 92  ----VLTLEFEEFYLVNVYTPNSQQKLARIDYRMAWENDFRDYLNELNK--------DKS 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GD N                         + +  +  +  +  +      +  A  
Sbjct: 140 VIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKFDELLKSGFIDTYRYFYPDKEGAYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ ++    L+  +    +             SDHCP+ +
Sbjct: 200 WWSYRFNARANNAGWRIDYFLVSKDFEDRLVDANIHTQI-----------EGSDHCPVEL 248


>gi|158297124|ref|XP_001689028.1| AGAP008053-PA [Anopheles gambiae str. PEST]
 gi|157015043|gb|EDO63591.1| AGAP008053-PA [Anopheles gambiae str. PEST]
          Length = 404

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 78/296 (26%), Gaps = 41/296 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ +++ NI  +                 +    +     + + DIV LQE+ S +    
Sbjct: 2   ELSILTLNIWGIPYVSKDR---------ETRVKAIGDVLASGNYDIVSLQEVWSDSD--- 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPL-----LGAKDS 136
                 +         +        +  + + +A+  +   V    +       +     
Sbjct: 50  ------YQYLKQRVENVLPFCHYFYSGVVGSGLAILSRYPIVAAFFHAWSVNGYIHRIQH 103

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               G +      + +N + + V   HL +               +    QA     +I 
Sbjct: 104 GDWFGGKGVGMAKISVNDQLVHVYVAHLHA-----EYNRQCDDYMAHRVIQAHDTAQFIE 158

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             +   V  V+AGD N +   L         K  D  D          + C+ N      
Sbjct: 159 STRGQSVLQVLAGDLNTEPGDLAYRVLVTSSKLKDSYDRKSIGSGVGTNECHTNSYTDPL 218

Query: 255 I--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     IDY +                 L   + +  +    SDH  +    
Sbjct: 219 AAKQLPNGKRIDYILYR--IGDHYEGRLLEHRLPLPERVPGQTFSYSDHEAVYAKL 272


>gi|73976315|ref|XP_865627.1| PREDICTED: hypothetical protein XP_860534 isoform 3 [Canis
           familiaris]
          Length = 569

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 84/296 (28%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNVQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----------- 132
             +    I  +  +                    +KN      S  L+            
Sbjct: 312 CTELNQPILPNIRKWKGPRGCWKAVVAEMPSTQLQKNPSPSGHSMDLIPTALTCEITGRR 371

Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                +++           + +    + ++++HL +         + + S S        
Sbjct: 372 ALPAGAWTCPPGPAPWGCRIRVGSNDLTLVNLHLATLVHPGGENPSRNHSDSHR---LAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     ++ GDF +  +    +      +         P    +   + KN
Sbjct: 429 FVQTLQETLKGEKDMIVLGDFGQGPDSSDYD-----ILRKEKFYHLVPAHTFTNI-STKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  ++
Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 538


>gi|18310156|ref|NP_562090.1| exodeoxyribonuclease III [Clostridium perfringens str. 13]
 gi|110802988|ref|YP_698514.1| exodeoxyribonuclease III [Clostridium perfringens SM101]
 gi|18144835|dbj|BAB80880.1| 3'-exo-deoxyribonuclease [Clostridium perfringens str. 13]
 gi|110683489|gb|ABG86859.1| exodeoxyribonuclease III [Clostridium perfringens SM101]
          Length = 250

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 75/299 (25%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y K+ DADI  LQE          
Sbjct: 1   MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LDLEGYHQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     +                  L         S  
Sbjct: 91  -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                         D + T+  +  +  F           
Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +           IDYF++  N    + + S    +             SDHCP+
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEIL-----------GSDHCPV 245


>gi|53715634|ref|YP_101626.1| hypothetical protein BF4354 [Bacteroides fragilis YCH46]
 gi|52218499|dbj|BAD51092.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 608

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 89/305 (29%), Gaps = 67/305 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK +L L   L   +A     +RL+++N+   +  +G+            +Y  +    
Sbjct: 1   MRKLLLLLFSALFVLSAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVI 49

Query: 62  KNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   DIV +QE+ S  A +    V  +                     +     I +  
Sbjct: 50  NNARPDIVAIQELDSMTARSNRTDVLKELAERTQLHPCFAPAID----YDGGKYGIGILS 105

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +  Q++ L G      R   R  +         +      HL              
Sbjct: 106 KETPLRVQTFALPG------REEARTLLVAEFP----EYVFACTHLSLTEED-------- 147

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIR 236
                   + + L+   +   ++  PF +AGDFN   +     D    ++ +        
Sbjct: 148 --------RMKSLEILKSVAADTRKPFFLAGDFNSDADSGFIKDLKSTFQILS------- 192

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                            K  +DY +  +      +  S   I              SDH 
Sbjct: 193 ---NPKQPTYPAS--EPKETLDYLIALKQETPTFVVNSARVI---------DEPLASDHR 238

Query: 297 PISID 301
           P+ ++
Sbjct: 239 PLLVE 243


>gi|332705691|ref|ZP_08425767.1| putative extracellular nuclease [Lyngbya majuscula 3L]
 gi|332355483|gb|EGJ34947.1| putative extracellular nuclease [Lyngbya majuscula 3L]
          Length = 328

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/322 (10%), Positives = 91/322 (28%), Gaps = 40/322 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSYNA 79
            + ++ ++N+  L   + +   K    +T        + +  K + ADIV  QE+    A
Sbjct: 4   NRFKVGTFNLCNLVLPDVLYYRKKIYTQTEYALKTTWIAEQLKKMKADIVGFQEVFHKEA 63

Query: 80  VAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           + + +     +    +                   +            +   +   D   
Sbjct: 64  LQQALAQSQVYDNATTVFANPTGKSPVVALTSRFPVLEYNVIKDFPTTACLDIQGTDIPL 123

Query: 139 RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---- 193
           +  +R  +E  ++++      V  IHLKS   +       +        QA+ L      
Sbjct: 124 KRFSRPVLEAHLKLSDTIDCTVFVIHLKSKRPIIPDGVDRNDPIEQAKGQARSLILRAAE 183

Query: 194 -------WITQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWKTIDPNDSLIRF 237
                   + + +    P ++ GD N                    +++       ++ +
Sbjct: 184 ATALRVILMDKLQHRDHPVIVMGDVNDSGLAITSQIVSGEPPLRKLWFQQKQIIWDVLLY 243

Query: 238 -------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                   +        + +  +   +D+ ++ Q       +        +  +     +
Sbjct: 244 YVKDIQARQNYGDFYYTHIHNGHHESLDHILVSQEFVVQNPKRIGRVGYVSLFNDHLIDE 303

Query: 291 RL---------SDHCPISIDYD 303
            L         SDH  + +  +
Sbjct: 304 TLSEEKIETWQSDHGQVVVSIE 325


>gi|301605741|ref|XP_002932509.1| PREDICTED: deoxyribonuclease-1-like [Xenopus (Silurana) tropicalis]
          Length = 282

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 93/308 (30%), Gaps = 39/308 (12%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            +L +    +    S    +++ ++NI             +S  +     ++L +     
Sbjct: 1   MLLLICSLTLTLCLSDISALKIGAFNIRAFG---------DSKMKNPEVSSVLMKILPRY 51

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA------IAVRK 118
             DIV +QE+           K       S      +S   S+     A         R 
Sbjct: 52  --DIVIIQEVRD---ADHSAVKLLMQRLNSLNTGPVYSHVISDTLGRDAYKEQYLFIYRN 106

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTY 177
             V V    +       +     +R    +     G  +   + I L S           
Sbjct: 107 DKVTVEDSYHYHDHCMYTGKDTFSREPFVVRFNAEGTVVEDFVLIPLHSAP--------- 157

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +   +       +D + + +      +  GDFN   +Y+ ++D     +  N+     
Sbjct: 158 KDAVREIDALYDVYEDIMEKWQTDN--MIFLGDFNAGCSYVTDSDWDNIRLRTNEQFAWL 215

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRL--SD 294
             +       N         D  V+   +  + ++Q+S     + +    ++ + L  SD
Sbjct: 216 IPDATDTTVGNTCCAY----DRIVVSGADLQEAIVQDSVKVFDFQKKYKLTQEEALAVSD 271

Query: 295 HCPISIDY 302
           H P+ ++ 
Sbjct: 272 HFPVEMEL 279


>gi|56695135|ref|YP_165482.1| hypothetical protein SPO0213 [Ruegeria pomeroyi DSS-3]
 gi|56676872|gb|AAV93538.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 357

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/364 (12%), Positives = 96/364 (26%), Gaps = 70/364 (19%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           MIR   LA +   +   A+ A+ +R+ ++N   LS +    + ++      +    +   
Sbjct: 1   MIR---LAALVLCLLPVAAAAEVLRVATFNTE-LSRKGPGLMLRDIAGGRDTQVAAVVSV 56

Query: 61  AKNLDADIVFLQ------EMGSYNAVAKVFPKNTWCIFYSTERLINHSK----------- 103
             +   DI+ LQ      E  + +A+A       W + +      N  +           
Sbjct: 57  IASARPDILALQGLDWDHEGRALDALAAQLAAAGWEMAHIFAAQPNSGRATDLDLDGDRR 116

Query: 104 --------RDSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRA 145
                             IA+  ++            +  +  P     +S   A    A
Sbjct: 117 IGGPGDAQGYGRFTGQGGIAILSRHPIAQAEIQDFSALRWRDLPGATLPESGGHAFPSEA 176

Query: 146 V------------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                         + ++ +  ++ +L        F    +     +          L  
Sbjct: 177 AQAAQRLSSTGHWLVPIDTDMGRMVLLTYQAGPPVFDGPEDRNGLRNRDETRFWQLLLDG 236

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---- 249
            +       +PFV+AG  N             + +  +  L     E      A      
Sbjct: 237 VVGAM--PDLPFVLAGGANLDPQDGEGYRGTIRALLADPRLQDPAPESSGAARAGPQGHA 294

Query: 250 ---------NLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                         +  +DY +       + +  S       +D         S H  + 
Sbjct: 295 GPDARDTVDWPGIGRFRVDYVLPS---THWRVVGSGVVWPAPDDPSAGPVSEASRHRLVW 351

Query: 300 IDYD 303
           +D  
Sbjct: 352 VDLS 355


>gi|300934548|ref|ZP_07149804.1| putative extracellular nuclease [Corynebacterium resistens DSM
           45100]
          Length = 938

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/333 (12%), Positives = 83/333 (24%), Gaps = 61/333 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWK----------------------NSVKRTTSDYTLLR 58
              + L S+N+       G                            S K        + 
Sbjct: 539 GGDLSLASFNVLNYFTDLGSDEDGCNAYNDREGNPVTAKKCTVRGAFSKKSFEDQQAKIV 598

Query: 59  QYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                L+  ++ L+E+ +          ++ K+                  +     + I
Sbjct: 599 AAINKLNVSVLGLEEIENSAKFGHDRDESLRKLVAALNAAGGNWKYVPSPKTLPGDEDVI 658

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC-- 168
            TA       V  +  S  L     S      R  +    +    K   + +        
Sbjct: 659 RTAFIYNPDKVSPVGDSRILDHEAFSGIA---RAPLAQEFKAAQGKENFVAVVNHYKSKG 715

Query: 169 ----FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDD 223
                     +    +  L S  ++ L  W+  ++E    P  + GDFN           
Sbjct: 716 SVARGDVDTGDGQGNNAKLRSNMSRQLLTWLNAQQEWKDKPQFVMGDFNAYAKEDAI--- 772

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
             + I+                 + +       +D+ + +  A K +      +I  +E 
Sbjct: 773 --RVIEEGGFTNLDTHFDAGL--SYQFGGRLGSLDHVLANAAAMKLVTGADVWDINSDEA 828

Query: 284 DIKSRGK--------------RLSDHCPISIDY 302
                 +              R SDH PI + +
Sbjct: 829 VNFEYSRRNYNVVDFFANDVFRASDHDPIKVGF 861


>gi|149728780|ref|XP_001491101.1| PREDICTED: similar to Deoxyribonuclease gamma precursor (DNase
           gamma) (Deoxyribonuclease I-like 3) (DNase I homolog
           protein DHP2) (Liver and spleen DNase) (LS-DNase) (LSD)
           [Equus caballus]
          Length = 380

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 94/294 (31%), Gaps = 34/294 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +   A  +R+ S+N+ +  E +  +              ++ +  K    DI+ L E+  
Sbjct: 14  SVHSALGLRICSFNVRSFGESKKENRNT---------MDVIVKVIKRC--DIILLMEIKD 62

Query: 77  YN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            N      + +    N+         + +   R++  + + A   ++K V V ++ Y   
Sbjct: 63  SNNMICPTLMEKLNGNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KKRYLYH 120

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +   +   +R    +  +     +    I                 S   + + A   
Sbjct: 121 DYQAGDADVFSREPFVIWFQSPYTAVKDFVIVPLHTTPDT--------SVKEIDELADVY 172

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            D   + K     F+  GDFN   +Y+         +  +   +    +++     +   
Sbjct: 173 VDVKRRWKAEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDLGFVWLIGDEEDTTVKSST- 229

Query: 252 RNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             K   D  V+        ++ +S S   + +    +  + L  SDH P+    
Sbjct: 230 --KCAYDRIVLRGREIVSSVVPKSNSVFNFQKSYALTEEEALGVSDHFPVEFKL 281


>gi|15642616|ref|NP_232249.1| extracellular nuclease-related protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121588108|ref|ZP_01677856.1| hypothetical protein VC274080_2619 [Vibrio cholerae 2740-80]
 gi|153819030|ref|ZP_01971697.1| hypothetical protein A5C_2696 [Vibrio cholerae NCTC 8457]
 gi|153821574|ref|ZP_01974241.1| hypothetical protein A5E_2936 [Vibrio cholerae B33]
 gi|229507327|ref|ZP_04396832.1| extracellular nuclease-related protein [Vibrio cholerae BX 330286]
 gi|229509749|ref|ZP_04399230.1| extracellular nuclease-related protein [Vibrio cholerae B33]
 gi|229516874|ref|ZP_04406320.1| extracellular nuclease-related protein [Vibrio cholerae RC9]
 gi|229606833|ref|YP_002877481.1| extracellular nuclease-related protein [Vibrio cholerae MJ-1236]
 gi|254851160|ref|ZP_05240510.1| extracellular nuclease-related protein [Vibrio cholerae MO10]
 gi|255744412|ref|ZP_05418364.1| extracellular nuclease-related protein [Vibrio cholera CIRS 101]
 gi|262158475|ref|ZP_06029590.1| extracellular nuclease-related protein [Vibrio cholerae INDRE 91/1]
 gi|9657210|gb|AAF95762.1| extracellular nuclease-related protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121547651|gb|EAX57748.1| hypothetical protein VC274080_2619 [Vibrio cholerae 2740-80]
 gi|126510411|gb|EAZ73005.1| hypothetical protein A5C_2696 [Vibrio cholerae NCTC 8457]
 gi|126520959|gb|EAZ78182.1| hypothetical protein A5E_2936 [Vibrio cholerae B33]
 gi|229345937|gb|EEO10909.1| extracellular nuclease-related protein [Vibrio cholerae RC9]
 gi|229353223|gb|EEO18162.1| extracellular nuclease-related protein [Vibrio cholerae B33]
 gi|229354832|gb|EEO19753.1| extracellular nuclease-related protein [Vibrio cholerae BX 330286]
 gi|229369488|gb|ACQ59911.1| extracellular nuclease-related protein [Vibrio cholerae MJ-1236]
 gi|254846865|gb|EET25279.1| extracellular nuclease-related protein [Vibrio cholerae MO10]
 gi|255737937|gb|EET93330.1| extracellular nuclease-related protein [Vibrio cholera CIRS 101]
 gi|262029636|gb|EEY48285.1| extracellular nuclease-related protein [Vibrio cholerae INDRE 91/1]
          Length = 869

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGLEQFGDAGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|299142059|ref|ZP_07035193.1| AP endonuclease domain protein [Prevotella oris C735]
 gi|298576521|gb|EFI48393.1| AP endonuclease domain protein [Prevotella oris C735]
          Length = 368

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 70/303 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+ + +  E  +  K            + +Y +    DI+ LQE  +     
Sbjct: 104 DAIKVMSYNVWSFAGWERHADGKFP----------ILEYIREQQPDILCLQEAMTNEIGQ 153

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                    I+   + +         +     IA+      V  +        +      
Sbjct: 154 ARVDSVLNKIYAYKDTMK-------FSPSSDCIALYSHYPIVSHERIVYPSRGNLSG--- 203

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
                   ++I    + V++ HL++    +  +  +                        
Sbjct: 204 -----AFEIKIGNDTVIVVNNHLETTGLSNEDKREFKSMVKGNLLTSDAKQASYRLIDKL 258

Query: 179 -PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             + +  + QA  +  +I++   S    ++ GDFN        +               F
Sbjct: 259 GEASAKRAVQADAVARYISKH--SDRSMIVCGDFNDSPISYARHTI------AKGLTDCF 310

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +    +  N    + ID+ +  ++         +       D         SDH P
Sbjct: 311 IATGNGLGVSYHNGGMYVRIDHIMCSKD---------WQPYGCKVDRSIGE----SDHYP 357

Query: 298 ISI 300
           I  
Sbjct: 358 ILC 360


>gi|295838281|ref|ZP_06825214.1| exodeoxyribonuclease III [Streptomyces sp. SPB74]
 gi|197698261|gb|EDY45194.1| exodeoxyribonuclease III [Streptomyces sp. SPB74]
          Length = 274

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/274 (9%), Positives = 73/274 (26%), Gaps = 58/274 (21%)

Query: 59  QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++     AD++ LQE+   ++     V     W   ++           + +     +++
Sbjct: 29  EWLAGTSADVLCLQEVRAEAHQLPEGVARPEGWFSLHAP----------AADKGRAGVSL 78

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +      ++       D   R        +  ++ G  + V  ++L S       +  
Sbjct: 79  YTRREPDRVRTGFGSAEFDGSGR-------YVEADLPG--VTVASLYLPSGEVGTERQEQ 129

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                       + L+             ++ GD+N                        
Sbjct: 130 KYRFMDEFLAYLKELRGRA---AAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLPEE 186

Query: 221 NDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKF 269
            +   + +D      +     +             +           IDY +      + 
Sbjct: 187 REWLSRVLDPGDGGYVDVVRGQYPGTEGPYSWWSYRGRAFDNDTGWRIDYHMASAGLAER 246

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++          +   +  +R SDH P+++ Y+
Sbjct: 247 AVKAEV-------ERAATHAERWSDHAPVTVTYE 273


>gi|268592513|ref|ZP_06126734.1| endonuclease/exonuclease/phosphatase family protein [Providencia
           rettgeri DSM 1131]
 gi|291311920|gb|EFE52373.1| endonuclease/exonuclease/phosphatase family protein [Providencia
           rettgeri DSM 1131]
          Length = 297

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 84/288 (29%), Gaps = 49/288 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NI            KN +    S+   L +    +DAD++ L E+ +  A +K 
Sbjct: 47  IKVATYNI-----------GKNELSPDVSNLDELNKAIAKIDADVIVLTEIDNKTARSKK 95

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +       +        K    +     + +  K      +   L         A  R
Sbjct: 96  VHQLEEIAKANKMDFAF-GKALDFDGGEYGVGILSKYKIDKSKVINLPSG-----DAEQR 149

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +   G    ++ +              +    ++   Q + + D      ++  
Sbjct: 150 VVLISQISKPGFDAPIIVMGTHL---------DWQKDPTIRIGQVRHILDASIGDTDTGF 200

Query: 204 PFV------IAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
             +      +AGDFN   N          W  ++                 +   +   I
Sbjct: 201 DNIAASIKILAGDFNSTANEQPIQEIRYMWNPVELKGI----------DYRSWPAVNPAI 250

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ID+    +     + +          D  + +   +SDH PI  + +
Sbjct: 251 DIDHIFTFKGQVWDVKKMEI-----PTDSKEFQWSSVSDHLPIIAELE 293


>gi|288959479|ref|YP_003449820.1| exodeoxyribonuclease III [Azospirillum sp. B510]
 gi|288911787|dbj|BAI73276.1| exodeoxyribonuclease III [Azospirillum sp. B510]
          Length = 264

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 81/306 (26%), Gaps = 69/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN++  +  + L     +R                 D++ LQE    +A   +
Sbjct: 1   MRIATWNINSVRMRLDLLLRLMEEER----------------PDVICLQETKVVDADFPL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P       ++                +  +A+  +            G +D       R
Sbjct: 45  APLAERGYVHA---------HIHGMKSYNGVAILSRLPFSSHDVQHWCGKQDC------R 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+       G ++  + I        D  +   +   +   Q    +  W+  ++    
Sbjct: 90  HALAR--LPGGIELHCVYIPA----GGDIPDPAVNDKFAHKLQFLDEMTRWLGTERTPDR 143

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+ GD N                   +     +           +    +        
Sbjct: 144 PMVLVGDLNIAPLEQDVWSHKELLSVVSHTPVEVERLAAMQASAGWIDAMRRFVPPEEKL 203

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +       L       +     D +    + SDH P
Sbjct: 204 YTWWSYRAKDWAASNRGRRLDHIWVTPPLEGAL--AGIKVLR----DARGWDPKPSDHVP 257

Query: 298 ISIDYD 303
           + +D D
Sbjct: 258 VIVDLD 263


>gi|156362086|ref|XP_001625612.1| predicted protein [Nematostella vectensis]
 gi|156212454|gb|EDO33512.1| predicted protein [Nematostella vectensis]
          Length = 257

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 74/305 (24%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
            ++ SWN+N L      +                  +    D D+  +QE   +   + K
Sbjct: 5   FKITSWNVNGLRAWLKNNSK---------------SFVSKEDPDVFCIQETKCALADIPK 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++++     +          + + +  K   +        G  +       
Sbjct: 50  EAKLAGYHCYWNSAEQKGY----------SGVGLCSKKEPIKVS----YGMGNKEHDKEG 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     ++    +   ++  ++ +                      + L +         
Sbjct: 96  R-----VITAEYEDFHLVTSYVPNSGRGLPRLGYRQQWNKDFLSYLKKLDEI-------- 142

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N                           + T+        F +    + +A
Sbjct: 143 KPVILCGDLNVAHKDIDLANPKTNTRTAGFTKEERADFTTLLGEGFKDTFRELYPDKKSA 202

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DYFV+       +        +             SDHCP+
Sbjct: 203 YTFWSYMGGARAKNVGWRLDYFVVSDRLVPKVCDSIIRSRV-----------MGSDHCPL 251

Query: 299 SIDYD 303
           S+   
Sbjct: 252 SLLLS 256


>gi|111019171|ref|YP_702143.1| DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1]
 gi|110818701|gb|ABG93985.1| probable DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus
           jostii RHA1]
          Length = 270

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/301 (10%), Positives = 69/301 (22%), Gaps = 58/301 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+ +WN+N                   +    +  + +  D D++ +QE    +     
Sbjct: 4   VRIATWNVN----------------SVRARTDRILDWLQRSDVDVLAMQETKCKDE---- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y   R + +            +A+  +      Q                 
Sbjct: 44  ------QFPYERFRELGYEVAHVGLSQWNGVAIASRVGLEDVQIGFEDQPGFHKDPEVAP 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ-------------QAQW 190
                 +      + +  +++ +   L     TY                      Q   
Sbjct: 98  AQEARAIGATCNGVRIWSLYVPNGRELADPHYTYKLDWLAKLHTDAVGWLGQNPDAQIAL 157

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + DW      +         F  K +      + ++    +                   
Sbjct: 158 VGDW--NVAPTDEDVWDPALFEGKTHTSAPEREAFQAFVESGFADVVRPHTPGP-GVYTY 214

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                          ID+ +        + +          D  + +GK  SDH P+ +D
Sbjct: 215 WDYTQLRFPKKQGMRIDFVLGSPALAGRVDKAEI-------DRNERKGKGASDHAPVIVD 267

Query: 302 Y 302
            
Sbjct: 268 L 268


>gi|19704226|ref|NP_603788.1| DNAse I homologous protein DHP2 precursor [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
 gi|296328862|ref|ZP_06871373.1| DNAse I family protein DHP2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|19714452|gb|AAL95087.1| DNAse I homologous protein DHP2 precursor [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
 gi|296153983|gb|EFG94790.1| DNAse I family protein DHP2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 279

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 94/305 (30%), Gaps = 37/305 (12%)

Query: 2   IRKYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
            RK +L  +F L  C +  S A +  + S+NI  L                  D     +
Sbjct: 3   KRKLLLLTIFALFFCLSILSSADEAYIASFNILRLGA-------------AKKDMPQTAK 49

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRK 118
             +    DIV L E+ + + V ++  +         +  I+     S+    + A   +K
Sbjct: 50  ILQGF--DIVGLVEVINRDGVEELVDELNKASDEKWDYHISPFGVGSSKYKEYFAYVYKK 107

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
             V+ ++        K S      R       +I       + +H               
Sbjct: 108 DKVKFIKSEGFYKNGKSSL----LREPYGATFQIENFDFTFVLVHTIYG--------NNE 155

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                 + +   + D+   + +      IAGDFN       +    +K  D     I   
Sbjct: 156 SQRKAENFKMVDVYDYFQDRDKKENDIFIAGDFNL-YALDESFKPLYKHSDKITYAIDPA 214

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +         N       D F   Q   +     S   + ++ D+ K   + +SDH P+
Sbjct: 215 IKTTIGTKGRANSY-----DNFFFSQKYSQEFTGSS-GALDFSGDNPKQMREIISDHIPV 268

Query: 299 SIDYD 303
            I  +
Sbjct: 269 FIVVE 273


>gi|332291511|ref|YP_004430120.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169597|gb|AEE18852.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 327

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 85/316 (26%), Gaps = 49/316 (15%)

Query: 26  LVSWNINTLSEQ-------EGVSLWKNSVKRTT----SDYTLLRQYAKNLD-------AD 67
           +  +N+  L +        +         +  +         L     N+          
Sbjct: 19  VGFYNLENLFDTTNNPETLDDDFTPNGFKEWNSYKFNKKIAKLSTVISNIGKEDTKTSPS 78

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQQ 126
           ++ + E+ + + +  +   +            +         I  A+  +K        +
Sbjct: 79  LLGVAEVENRSVLESLIATDNLKDEGYDIVHYDSPDE---RGIDVALLYKKADFKVTASE 135

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
              L    +   R   R  + +  E+ G  + +L  H  S    ++  +    + +  ++
Sbjct: 136 PITLYLEAEEGGRDYTRDILYVQGELLGNPVHILVNHWPSRRSGENETSQKRITAAQRNR 195

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           +   +   +   ++  V  +I GDFN   +     ++  KT   N  L    + + S   
Sbjct: 196 EV--IDKLMN--EDHKVKIIIMGDFNDGPHSESVKNNLVKTEFYNPMLYLGTRYEGSLNY 251

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQ-------------------ESFSEILYNEDDIKS 287
             +        D  +   N  +                         F    +     K 
Sbjct: 252 RFEWFIF----DQIIFSNNFVQLHENTLLYEKSDIYNDFFLTEYEGKFKGTPFRTYAGKR 307

Query: 288 RGKRLSDHCPISIDYD 303
                SDH P+     
Sbjct: 308 YLGGYSDHFPVYSILS 323


>gi|220904154|ref|YP_002479466.1| exodeoxyribonuclease III Xth [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868453|gb|ACL48788.1| exodeoxyribonuclease III Xth [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 268

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 80/307 (26%), Gaps = 69/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +LVSWN+N L      + W                +  + DA +V LQE        K 
Sbjct: 3   FKLVSWNVNGLRAVSAKADW---------------DWFAHSDAQVVALQE-------TKA 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+             +     +    ++ +AV  +   +   +           R    
Sbjct: 41  HPEQLDEDVREPAGWESRWASSTVKKGYSGVAVFSRVPFLSWSAELPQPEFQGEGRL--- 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLSQQAQWLKDWITQKK--E 200
                 + +        + +  +    +       + +   +  +  + + ++   +   
Sbjct: 98  ------LHLEYPDFHFFNGYFPNGGAEELDENGKPTGNFKRVPYKMAYFEAFLAYAEECR 151

Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              P V+ GDFN                   +L     F         +  F        
Sbjct: 152 KSKPIVVCGDFNIAHRPIDLARPKPNEKCTGFLPEERAFLDRFTALGYVDTFRHVHGDAP 211

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       K           IDYF + Q     +        +Y            SDHC
Sbjct: 212 DNYSWWSYKTRARAKNVGWRIDYFFVSQELAPAIRDAWIENDVY-----------GSDHC 260

Query: 297 PISIDYD 303
           P+ +  +
Sbjct: 261 PVGLSLE 267


>gi|148654820|ref|YP_001275025.1| endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1]
 gi|148566930|gb|ABQ89075.1| Endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1]
          Length = 348

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 68/293 (23%), Gaps = 62/293 (21%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            +S     R++++NIN  +                     +    +    DI+ LQE   
Sbjct: 105 FSSQGAPFRVMTFNINGGN----------------ERTDRVLAAIRAAQPDIIALQE--- 145

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                     +         +     +        T + +  +             A   
Sbjct: 146 -------LNPSIAAALERDLKNEYPYQLLDPQWGVTGMGIISRFPLR-------PLAARL 191

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                      + ++  G+ I +L+ H                +     +QA+ +  ++ 
Sbjct: 192 PGDRWIGAPQAVEIDTPGQTITLLNFHAIPPVGPSEYMTA---AIGERERQAEAINAFVQ 248

Query: 197 QKKESLVPFVIAGDFNRKINYLGNN-------DDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +     P V+AGD N    +   +        D W+                       
Sbjct: 249 AQ---RTPVVVAGDMNATPFHRAYHILEHGALSDVWRECGSGAGFTWPGNRTIGGVPVLP 305

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + ID+                 +              +SDH  +    
Sbjct: 306 WF---VRIDHLFTTNGIVCLDASVGPWD-------------GVSDHRAVVATL 342


>gi|270290148|ref|ZP_06196374.1| exodeoxyribonuclease III [Pediococcus acidilactici 7_4]
 gi|270281685|gb|EFA27517.1| exodeoxyribonuclease III [Pediococcus acidilactici 7_4]
          Length = 251

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 75/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                             LDADI  +QE          
Sbjct: 1   MKLISWNVNGLRAAVKHGF---------------LDVFNELDADIFCVQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  AV  K   V       +   D   R    
Sbjct: 45  LDLPGYHQYWNYAEKKGY----------SGTAVFTKREPVAVSYGLGIPEFDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +++  +  +        +             + L D          
Sbjct: 91  -----VITLEYEEFFLVTCYTPNSQPELRRLDYRMNWDDAFRAYVKQLAD--------TK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  +  +     +      +    
Sbjct: 138 PVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQKFTELLQSGFTDTYRYFYPDKEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV  Q   K L        ++            SDHCPI 
Sbjct: 198 SWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKIHTEIF-----------GSDHCPIE 246

Query: 300 IDYD 303
           +D +
Sbjct: 247 LDLN 250


>gi|257453584|ref|ZP_05618874.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus
           SK60]
 gi|257449042|gb|EEV23995.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus
           SK60]
          Length = 262

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 80/288 (27%), Gaps = 48/288 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + + S+NI+             S          +      + +DI+ LQE+   N   
Sbjct: 13  NSLIITSYNIH----------KGMSPLNRFVKMEGIAAALDQVQSDIICLQEVQGQNLKR 62

Query: 82  KV----FPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            V    FP  +   ++        ++ K    N  H   AV  ++        P      
Sbjct: 63  VVKYNEFPDQSQHEWFGEYLQLENSYGKNVEYNHGHHGNAVLSRHPL-----DPKHNVNI 117

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           + SR   R  +   ++  G    ++ +        +              +Q + +  +I
Sbjct: 118 TVSRLEQRGVLHCEIQPIGWHTPIIVLCAHLNLMEND-----------REKQYEVMSQYI 166

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
             + +   P ++AGDFN               +      +     K       K     +
Sbjct: 167 NNEIDQSTPLILAGDFNDWKKLSCQKLGCDLNLQE---AVLTHHGKLLPTFPAKLP--VL 221

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +D   +       L                     LSDH P+S +  
Sbjct: 222 SLDRIYVRN-----LQVHRAWVH------KGQPWSNLSDHLPVSAEVS 258


>gi|308233639|ref|ZP_07664376.1| exodeoxyribonuclease III Xth [Atopobium vaginae DSM 15829]
 gi|328944401|ref|ZP_08241863.1| exodeoxyribonuclease III [Atopobium vaginae DSM 15829]
 gi|327490985|gb|EGF22762.1| exodeoxyribonuclease III [Atopobium vaginae DSM 15829]
          Length = 259

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 82/309 (26%), Gaps = 76/309 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S     R VSWN+N L                        +    L+ADI  +QE     
Sbjct: 2   SQKHPYRFVSWNVNGLRATLKKEPSF-------------LEIFSTLNADIFAIQETK-LQ 47

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A       + +   +S           +    ++  AV  +   +         A D+  
Sbjct: 48  AGQVDLDLDGYTQTWS----------YAERKGYSGTAVFSREKPLSTIHTIGCKAADNEG 97

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R         +  +  +K W +D++  +     +  +          +    L       
Sbjct: 98  R---------VCALEFEKFWFVDVYTPNSKNELARLDERMEWDKAYREFLVGL------- 141

Query: 199 KESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243
            ++  P +  GDFN                           + ++        F     +
Sbjct: 142 -DAQKPVITCGDFNVAHQEIDLKNPASNHENAGFSDEERAGFSSLLGAGFTDTFRSAHPT 200

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              A      +           IDYF++       +   +    +Y            SD
Sbjct: 201 LEGAYSWWSYRMRSRERNAGWRIDYFLVSNRIANTVTSSAIYNEIY-----------GSD 249

Query: 295 HCPISIDYD 303
           HCP+ ++ +
Sbjct: 250 HCPVGLELE 258


>gi|218131485|ref|ZP_03460289.1| hypothetical protein BACEGG_03103 [Bacteroides eggerthii DSM 20697]
 gi|317476445|ref|ZP_07935694.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii
           1_2_48FAA]
 gi|217986417|gb|EEC52754.1| hypothetical protein BACEGG_03103 [Bacteroides eggerthii DSM 20697]
 gi|316907471|gb|EFV29176.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 366

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 90/312 (28%), Gaps = 64/312 (20%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
                +    + ++ +S+NI         +               +  Y K  +ADI+ L
Sbjct: 90  LNFHTSNLPEKSIKFLSYNIMGFDGANKRNGKNP-----------ILTYLKESNADILCL 138

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE  S  +   +  K+              +   S +     IA   K   +  +     
Sbjct: 139 QEYASDESHRHLTQKDI-ERELKDYPYHRINVVGSGSGYSNKIACYSKFPILSARVLNYT 197

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------------- 178
              +         +V   ++++   I +++ HL+S     + ++ Y              
Sbjct: 198 SNYN--------GSVLYELKLDEDTITLINNHLESNKLTKTDKDIYEDMLKAPEKEKVKS 249

Query: 179 ----------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                      + ++ + QA  +   I          ++ GDFN        +    + +
Sbjct: 250 GARLLVRKLAEASAIRAPQADTIAKEIA--SSRHPSIIVCGDFNDTPISYT-HRVIAQNL 306

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
           +       F +       +    +    ID  ++ +N   +             +    +
Sbjct: 307 ND-----AFTQSGRGLGVSYNQNKFYFRIDNILISKNLQSY-------------NCTVDQ 348

Query: 289 GKRLSDHCPISI 300
             + SDH PI  
Sbjct: 349 SIKESDHYPIWC 360


>gi|328848136|gb|EGF97385.1| hypothetical protein MELLADRAFT_70027 [Melampsora larici-populina
           98AG31]
          Length = 301

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/297 (10%), Positives = 76/297 (25%), Gaps = 37/297 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L ++NI          L +      ++   L+       + D++  QE+  +  +  +
Sbjct: 10  LKLATYNIRYSPPNSRPILPEAP---WSARLPLILNQLNWEEPDLIGAQEVLDHQCIDLL 66

Query: 84  --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +                +     +       +        P +    S+    
Sbjct: 67  EGLNQLGYTGIGVGRDDGKRLGEYAPIFWKSDQFELVDHHYFWLSEEPDVPGSISWDSGQ 126

Query: 142 NRRAVELLVEINGKKIWVL-------------DIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            R    + ++     + V               I + +  F D        S  L+  +A
Sbjct: 127 TRMVTCVELKPKLNTVQVDGIFQLPGQNSLDRSIFVMNTHFDDRGSYAREQSAKLIRYRA 186

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----DDFWKTIDPNDSLIRFPKEKDSR 244
           + L        ++  P  + GD N     L       +   +    +             
Sbjct: 187 EALIK------KTSKPVFLLGDLNSTPEELPYKTLTTESTGQLSFKDSRQNAKHLYGAIN 240

Query: 245 CNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +N      ID  ++          + +  I    +  +      SDH  +
Sbjct: 241 ATYTSFSKNPSVQGVIDVVML---MGYHWEAKKYGVIP---NSFEDDEYYASDHRLV 291


>gi|315151420|gb|EFT95436.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0012]
          Length = 254

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISDHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           Q      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|257897862|ref|ZP_05677515.1| AP endonuclease [Enterococcus faecium Com15]
 gi|257835774|gb|EEV60848.1| AP endonuclease [Enterococcus faecium Com15]
          Length = 250

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 76/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 ++   LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAIVNKNF---------------LEFFHELDADFFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D+  R    
Sbjct: 45  LDLPGYYQYWN----------YAERKGYSGTAIFAKEPALNATYGMGIDIHDTEGRL--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +++  +  +        +             + L        +   
Sbjct: 92  ------ITLEYSDFFLVTCYTPNSQSELKRLDYRLEWEEAFYNYLENL--------KKQK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +          +  N  +  F     ++    
Sbjct: 138 PVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAALSRLLDNGFIDTFRYFYPTQEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  ++    L                      SDHCP+ 
Sbjct: 198 SWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHT-----------DIMGSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|295087971|emb|CBK69494.1| Predicted extracellular nuclease [Bacteroides xylanisolvens XB1A]
          Length = 405

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/342 (11%), Positives = 87/342 (25%), Gaps = 71/342 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+VSWNI    +    SL  +           +  R       + +    +       
Sbjct: 70  PFRVVSWNIENQFDTHHDSLKNDHEFLPDAMRHWNYSRYKKKLVDVARVITAIGEWSPPA 129

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V L E+ +   +  +  ++          + N         I  A+  ++   ++L   
Sbjct: 130 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 186

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSP-SCSLLS 185
              +     +     R  + +  + + G  + V   HL S         +Y   +  +L 
Sbjct: 187 SISIPPLKQY--RPTRDLLHVSGLLLTGDTLDVFVCHLPSRSGGAKESESYRLYAAHILR 244

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227
            +   +         SL   +I GDFN                                 
Sbjct: 245 MEVDSI-----MSIRSLPQVIIMGDFNDYPTNQSIQKILEAEAPPVTTNNLASTTGSTNF 299

Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268
                       +   K K     + K       +D+ ++                    
Sbjct: 300 STVAPSSLKLYHLLARKAKSKDFGSYKYRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 359

Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     ++   +  +           +SDH PI  D++
Sbjct: 360 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGVSDHLPIYADFE 401


>gi|261211177|ref|ZP_05925466.1| extracellular nuclease-related protein [Vibrio sp. RC341]
 gi|260839678|gb|EEX66289.1| extracellular nuclease-related protein [Vibrio sp. RC341]
          Length = 867

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 90/373 (24%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 471 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 530

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 531 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAVDSLGTDVITTGVIY 590

Query: 117 RKKNVRVLQQSYPLLGAKD------------SFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 591 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVVEDGKNYQRDTLAPTFKVKGGNEKITVAVN 650

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           HLKS         +       +   L  Q                   +     VI GD 
Sbjct: 651 HLKSKGSACWEDAAPVEQGGQAGQDLDYQGACENFRVAAAVALGDALTKIDGHKVILGDM 710

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 711 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAIKHP 770

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 771 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 830

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 831 RASDHDPAVLELN 843


>gi|256965365|ref|ZP_05569536.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis
           HIP11704]
 gi|257089645|ref|ZP_05584006.1| predicted protein [Enterococcus faecalis CH188]
 gi|307273475|ref|ZP_07554719.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0855]
 gi|312903989|ref|ZP_07763158.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0635]
 gi|256955861|gb|EEU72493.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis
           HIP11704]
 gi|256998457|gb|EEU84977.1| predicted protein [Enterococcus faecalis CH188]
 gi|306509814|gb|EFM78840.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0855]
 gi|310632709|gb|EFQ15992.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0635]
 gi|315578337|gb|EFU90528.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0630]
          Length = 254

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 84/286 (29%), Gaps = 46/286 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQTIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKI 255
           Q      P ++ GDFN +     +     K  D  +    + P+         K      
Sbjct: 158 QY-----PTLLMGDFNAESGEAVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELE 212

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            IDY  +          + +             G+  SDH P+  +
Sbjct: 213 EIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|190345324|gb|EDK37192.2| hypothetical protein PGUG_01290 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 720

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 85/327 (25%), Gaps = 41/327 (12%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + S      L+S+N      +  +      +           L++   +   D+V +Q
Sbjct: 371 TTSDSEPDSFTLLSYNTLCQHYAPSKLYKFTPSWALDWEFRRAALKEEVLSYKTDVVCMQ 430

Query: 73  EMGSYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-- 126
           E+ +        P         +F+   R       DS      A   +     +L +  
Sbjct: 431 EVETRTFHDFWVPVMAEIGYKGVFFCKTRSKTMGSVDSKKVDGCATFYKSSKFELLTKMN 490

Query: 127 ---------SYPLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
                    S      KD F+R  N+        L    +G+KI V + HL      +  
Sbjct: 491 FEYNSVCMGSDKYKKTKDLFNRFMNKDNIALITYLQHLESGEKILVTNTHLHWDPAFND- 549

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                    LL +    LK +           VI GDFN   +          ++  +  
Sbjct: 550 -VKALQVGILLEELQGVLKKFGHTDDVKNANVVICGDFNSVKDSAVYQLFSSGSVTKHPD 608

Query: 234 LIRFPKEKDSRC-----------------NANKNLRNKIPIDYFVMDQ-NAYKFLIQESF 275
           L      + +                     N +      IDY      N     +    
Sbjct: 609 LDGRDYGRFTDEGFKHVFKLKSAYDGELPFTNFSPGFTEVIDYIWYTPGNLRVKGLLGKI 668

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            +               SDH  I   +
Sbjct: 669 DDNYLKNCIGFPDAHFPSDHIAIVTKF 695


>gi|262370848|ref|ZP_06064172.1| catabolite repression control protein [Acinetobacter johnsonii
           SH046]
 gi|262314210|gb|EEY95253.1| catabolite repression control protein [Acinetobacter johnsonii
           SH046]
          Length = 272

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                 ++   +  +    DAD++ +QE   ++     
Sbjct: 14  LRVVSINVNGLRS---------------AEKKGIFDWIATSDADVICMQESRITHEQWTN 58

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V           DS  R   
Sbjct: 59  KFKPEGWHTHLFPAERPGYA----------GTAIYSRLPFVSVTDGLGFELADSQGRF-- 106

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++   + + +  ++L S    +  +              +  K  + Q ++ 
Sbjct: 107 ---ISAEFDLGLDQNVHICSLYLPSGSSGEEAQVRKD-------HFLEEYKQILKQWRDE 156

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N     +   +                +   I      +   +E      
Sbjct: 157 NKSVIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERSWLDHIYDELGYVDTFREVRPEAE 216

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +     +                +    SDH P
Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYQACSPDWKARTVNAWV-----------YKETWFSDHAP 265

Query: 298 ISIDY 302
           + IDY
Sbjct: 266 VIIDY 270


>gi|255039474|ref|YP_003090095.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
 gi|254952230|gb|ACT96930.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
          Length = 233

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 78/281 (27%), Gaps = 49/281 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+S+NI                 +  S+   + +  K  D D+V LQ + S     K 
Sbjct: 1   MKLMSFNIRH-----------GLNNQEESNLRDILRIIKENDPDLVALQAVDSLVDKGK- 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  I   T    +++  D+N++    + +         Q   L     +  +    
Sbjct: 49  VQFQLRQIAAQTGMYYSYAVADTNDNGTQGLGILSNWPMEKTQVIHLPKTPGADPKVLQC 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             ++L            +  L+    +D             + QA ++   +     S+ 
Sbjct: 109 GLIKL---SRSVTFRFCNSRLEYASVMD------------RALQAAYINQML---VNSVQ 150

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++  D   + N            D           +    +          +DY    
Sbjct: 151 PVLLGMDMGARPNEQPYFSFRRNWQDAARGSQMQTWNEGLPGD---------RLDYIFA- 200

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 L+        Y           +SDH PI    +F
Sbjct: 201 ------LLNNKVRIKNYKVIRNYPD---VSDHYPIQATIEF 232


>gi|37993816|gb|AAR06986.1| sphingomyelinase [Bacillus cereus]
          Length = 252

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 79/230 (34%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +    D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERPDLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +  GD N        N        +KT+  
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHA 247


>gi|283784549|ref|YP_003364414.1| endonuclease/exonuclease/phosphatase [Citrobacter rodentium ICC168]
 gi|282948003|emb|CBG87567.1| putative endonuclease/exonuclease/phosphatase [Citrobacter
           rodentium ICC168]
          Length = 253

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 76/288 (26%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ N +                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVLGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  T   F +     +++        + H   AV  +                S
Sbjct: 59  LHVENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            +    R  +   +      + I V+ +HL                 +    Q + L DW
Sbjct: 114 VAGGEKRGVLYCRIVPPQLDRPIHVMCVHLGLR-------------EAHRQAQLKMLADW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +        P V+AGDFN                        F                 
Sbjct: 161 VNA-LPDGEPVVVAGDFNDW-----RQKASLPLKKTAGLDEIFTHAHGRPARTFPVSLPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +P+D   +                           + LSDH P+S + 
Sbjct: 215 LPLDRIYVKNA-----------NTSSPTVLPLRSWRHLSDHAPLSAEI 251


>gi|83942579|ref|ZP_00955040.1| hypothetical protein EE36_16102 [Sulfitobacter sp. EE-36]
 gi|83846672|gb|EAP84548.1| hypothetical protein EE36_16102 [Sulfitobacter sp. EE-36]
          Length = 235

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 78/280 (27%), Gaps = 55/280 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ S+N+      +              D   + +  + L ADIV LQE         
Sbjct: 5   PLRIASYNMRKAMGTDR-----------KRDPARILRVIQTLAADIVVLQEADMRLGPRP 53

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    +      S      A+ +R +   +  +   L G          
Sbjct: 54  SALPMDQVTAQTGLIAVPVPSEVSIGWHGNAVLLRPEAELIEVKHLNLPGM-------EP 106

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+ +  ++    + ++  HL                      Q   L   +  +  S 
Sbjct: 107 RGAMVVDFDLRDIPLRIIATHLGL-------------MRRSRRAQLSALIAHLDAQ--SK 151

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P +IAGD N              +++     +    +  +   +         +D   +
Sbjct: 152 RPTLIAGDMNEW------------SLNVGLGRLAHHFDIYAPGKSYHARLPLAALDRIAV 199

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D              ++          +R SDH PI +D+
Sbjct: 200 DDAL----------HVMGGGVCETDDARRASDHLPIWLDF 229


>gi|20090923|ref|NP_616998.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
           acetivorans C2A]
 gi|19916002|gb|AAM05478.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
           acetivorans C2A]
          Length = 260

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 71/309 (22%), Gaps = 77/309 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78
            +   L+SWN+N L                                D++ +QE       
Sbjct: 2   PENYNLISWNVNGLRAAMKKGF---------------LDLLLEQKFDVICVQETKASPEK 46

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              +V     +  ++ +     +S   + +                    P         
Sbjct: 47  LPREVKNIPGYHNYFVSAERSGYSGVGTFSKQK-----------------PFKVETGMGI 89

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +R    L V+       +++I+  +                          D+    
Sbjct: 90  EEFDREGRFLRVDYEN--FTLMNIYFPNG-------KASQERLEYKMSFYDAFLDYANAL 140

Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           K      VI GD N                             K  D            +
Sbjct: 141 KAEGKKLVICGDVNTAHREIDLARPKENETTSGFLPEERAWMDKFFDAGYLDTFRLFNSE 200

Query: 243 SRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
               +  +LR +         +DYF + +N    +                      SDH
Sbjct: 201 GGNYSWWSLRTRARERNVGWRLDYFFVSENLRDNVKAAPI-----------YPEITGSDH 249

Query: 296 CPISIDYDF 304
           CP+ ++ +F
Sbjct: 250 CPVGLELEF 258


>gi|163942794|ref|YP_001647678.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
           KBAB4]
 gi|229014262|ref|ZP_04171382.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
 gi|229135910|ref|ZP_04264673.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
 gi|163864991|gb|ABY46050.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
           KBAB4]
 gi|228647552|gb|EEL03624.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
 gi|228747039|gb|EEL96922.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
          Length = 352

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  AHGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEIDIKSM--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N  K   ++++HL +        
Sbjct: 168 SKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  ++    ++ GD+N+ I+    +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEYLKEYMNKHYKNGDYVIMGGDWNQLISNAQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|253734882|ref|ZP_04869047.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|253727064|gb|EES95793.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus TCH130]
          Length = 275

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 80/278 (28%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
                +   +D      Y K  + D+V   E     A  K+         Y T       
Sbjct: 3   NHFWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 60

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 61  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 119

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K + V+  H +S    DS          + ++Q + + D++ +          I GD N 
Sbjct: 120 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 175

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D  K ++ ND L                  N        +DY   D++  +
Sbjct: 176 N-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 234

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 235 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 272


>gi|167830020|ref|ZP_02461491.1| Metal-dependent hydrolase [Burkholderia pseudomallei 9]
          Length = 290

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 74/280 (26%), Gaps = 56/280 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+ ++NI+                 T S    +      L AD++ LQE+    A   
Sbjct: 4   ELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVPLGGARGA 52

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   +   T                   AV  +      +   L     SF     
Sbjct: 53  DV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SFGNREP 104

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A++  +E     + V+  HL               S +  S Q   L   +       
Sbjct: 105 RGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAAFDTRA 148

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GD N         + F +       +  F +    R            +D   +
Sbjct: 149 LPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--LDRIWV 197

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ++L+  +                   DH P+    
Sbjct: 198 HPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 227


>gi|220930682|ref|YP_002507591.1| exodeoxyribonuclease III Xth [Clostridium cellulolyticum H10]
 gi|220001010|gb|ACL77611.1| exodeoxyribonuclease III Xth [Clostridium cellulolyticum H10]
          Length = 253

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 83/303 (27%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +LVSWN+N L    G   W                + K +D+DI  +QE        ++ 
Sbjct: 3   KLVSWNVNGLRACIGKGFW---------------DFFKEVDSDIFCIQETKLQEGQVELE 47

Query: 85  PKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            +   +  +++           +    ++  A+  K   V       +   D+  R    
Sbjct: 48  QELEGYEQYWN----------YAVKKGYSGTAIFTKIKPVSSSCGIGIEEHDNEGR---- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + ++++++  +                      + L++          
Sbjct: 94  -----VITLEFDQYFLVNVYTPNSKRELERLEYRMKWEDDFRIYLKQLEE--------TK 140

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD N     +                   + +  +     +  +      +  A 
Sbjct: 141 PVIICGDMNVAHKEIDIKNPRSNKRSAGFTMEEREKFSELLEQGFVDSYRTLYPDKTGAY 200

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF + +                 E+         SDHCP+ 
Sbjct: 201 TWWSYMFKARERNVGWRIDYFCVSEVLK-----------NIIEEADIYSEIMGSDHCPVG 249

Query: 300 IDY 302
           +  
Sbjct: 250 LTI 252


>gi|300784682|ref|YP_003764973.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32]
 gi|299794196|gb|ADJ44571.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32]
          Length = 258

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 75/304 (24%), Gaps = 71/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                        +  + +    D++ LQE+ +       
Sbjct: 1   MRIATWNVN----------------SIVPRLPRVLGFLEETAPDVLCLQELKNTTEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +            + +  +          L G       +  R
Sbjct: 42  -------FPAAEIEALGYEVAAYGLGRWNGVGIVSRVGVSDVVRG-LPGEPQFDGASEAR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +    D+    Y        +    L   +  +     
Sbjct: 94  A-----IGATCGGVRVWSVYVPNGREPDNPHYAYK------LEWLSSLHSLVASEVSDG- 141

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GDFN                         +    +        FP+      +  
Sbjct: 142 PFAVLGDFNVAPTDADVWDIAVFAESTHVTKPEREALARLRDLGLSDVFPRPLKYD-HPF 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID    ++     +            D    +GK  SDH PI 
Sbjct: 201 TYWDYRAGNFPNNKGMRIDLVYGNEAFTSAVTDSYV-------DRNARKGKGPSDHAPIV 253

Query: 300 IDYD 303
           +D D
Sbjct: 254 VDLD 257


>gi|316933480|ref|YP_004108462.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
 gi|315601194|gb|ADU43729.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
          Length = 256

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L  + K    +IV LQE+ + +A    
Sbjct: 1   MKIATFNVNNVN----------------KRLPVLLAWLKAARPEIVCLQELKAADA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  R   ++   +       +A+  +   ++     L GA        +R
Sbjct: 41  ------DFPEAALRRAGYTAAWAGQKSWNGVAILARRREIVVTRRRLPGAP---HDKQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I V  ++  +       +     +        + L        +S  
Sbjct: 92  YIEAAV-----AGIIVGCLYAPNGNPQPGPKFDEKLA------WLKRLNRHAATLLKSGA 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN                           +  +                    
Sbjct: 141 PVVLAGDFNVVPTPADIYPTKSWDKDALVQPAPRKLFAALLRQGWTDALRHCHPDDA-PY 199

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID+ ++D +    L +          D         SDH P  
Sbjct: 200 TFWSYWRKRFERDAGLRIDHLLLDPSLALRLKRAGV-------DRKVRAAPEASDHAPAW 252

Query: 300 IDYD 303
           I  D
Sbjct: 253 IMID 256


>gi|227497368|ref|ZP_03927600.1| possible exodeoxyribonuclease III [Actinomyces urogenitalis DSM
           15434]
 gi|226833239|gb|EEH65622.1| possible exodeoxyribonuclease III [Actinomyces urogenitalis DSM
           15434]
          Length = 274

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 86/306 (28%), Gaps = 61/306 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ + N+N +                 +    +  + +    D++ LQE+ +    A  
Sbjct: 1   MRIATVNVNGIRA---------------AARKGMGTWLEASAPDVLLLQEVRADEETAAA 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +       R+   +           +AVR+     L +S   +  +       + 
Sbjct: 46  L-LPGYSSLIWPCRIKGRAG--------VGVAVREGGPVRLGESRYGVAGQAEEPDVDSG 96

Query: 144 RAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R +E+ +     +  + V+  +L S        +       L+  +   L   +   +  
Sbjct: 97  RWLEVDLADADAQTVLTVVSAYLHSGQIGTEKMDQKYAHLELVDTRMGEL---LASAQAG 153

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----------------WKTIDPNDSLIRFPKEKDSRC 245
               V+AGD N   +     +                   +    +  +      +    
Sbjct: 154 GPQVVMAGDLNVVRSERDIKNWKPNHNKVAGVLDEEIAHLEGWFASGWVDVARHLEPEAQ 213

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY V   +     +           D   S  ++ SDH 
Sbjct: 214 GPYTWWSQRGKAFDNDAGWRIDYQVATPSLAGRAVSA-------VVDRAASYAEQWSDHA 266

Query: 297 PISIDY 302
           P+ ++Y
Sbjct: 267 PLVVEY 272


>gi|119477271|ref|ZP_01617507.1| Endonuclease/exonuclease/phosphatase [marine gamma proteobacterium
           HTCC2143]
 gi|119449634|gb|EAW30872.1| Endonuclease/exonuclease/phosphatase [marine gamma proteobacterium
           HTCC2143]
          Length = 260

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 83/298 (27%), Gaps = 59/298 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A+   ++RL S+NI+                 + +    LR   + ++AD++FLQE+  
Sbjct: 8   PATEPLQLRLCSYNIH----------KGICAANSRAILPQLRHSIRTVNADMMFLQEVVG 57

Query: 77  YNAVAKV---------FPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
              +A +              +            + +       H   A+  K       
Sbjct: 58  EKQLADLSSKKVSGAAVEYPQFEFLADEVWPHYAYGRNALYQTGHHGNAILSKYPFDE-- 115

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                    S  R   R  +   +EI      +  I      F                +
Sbjct: 116 ---WDNTDVSHWRFSQRGILLGKLEIG-----LYVICTHFGLFG-----------RERKR 156

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           Q   L D + ++     P +IAGDFN     L       +       + R    + ++  
Sbjct: 157 QLVQLLDLVAERVPDAAPLIIAGDFNDWSGSLDRQ---IRHRIGVQDVYREAYGRRAKTF 213

Query: 247 ANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K     +  D             +                  ++LSDHC +  ++ 
Sbjct: 214 PAKFPVFSM--DRIYYRNMELIDAEVLSGM------------PWQQLSDHCALYAEFS 257


>gi|313205335|ref|YP_004043992.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
 gi|312444651|gb|ADQ81007.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
          Length = 343

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/348 (10%), Positives = 84/348 (24%), Gaps = 53/348 (15%)

Query: 1   MIRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSE-------QEGVSLWKNSVK 48
           M +  +     F+     +       Q  +++ +N+    +        +   L      
Sbjct: 1   MKKNVLTVFCLFIALIINAQTAEKEKQNFKIMCYNVENFFDCVDDSTTNDNEFLPTGIRA 60

Query: 49  RTTSDYTL----LRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100
              + Y      + +    +       +V + E+ S   +  +     +    +      
Sbjct: 61  WNYTKYQKKQANIARVITAIGGWEAPALVGMCEVESRKCLIDL---TRYSGLKNLRYKFI 117

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
           H +      I  A+  +    +        +   D+ +           V   G  + V 
Sbjct: 118 HHESPDPRGIDVALLFQPSQFKPFHDQAIKIRYPDAPANRTRDILFVSGVIPTGDTLHVF 177

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             H  S    +   +      + +    +   D I          VI GDFN        
Sbjct: 178 VCHFPSRLGGEMESDDKRLFVASV---VRAKADSIFA-ASPKPNIVIMGDFNDFPTNSSL 233

Query: 221 -----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                      ++          K       +NK+  +   +D  ++  N  K       
Sbjct: 234 LEVLKAKPIVDSVSTQSLYNLMYKLHTEGKGSNKHSGDWGALDQMIVSGNLLKSSNSIYT 293

Query: 276 SEI---------------------LYNEDDIKSRGKRLSDHCPISIDY 302
            +                       +            SDH PI  D+
Sbjct: 294 KQSDAHFFDADFLLENDNTFLGKQPFRTYAGMKYQGGFSDHLPIYTDF 341


>gi|325107212|ref|YP_004268280.1| deoxyribonuclease I [Planctomyces brasiliensis DSM 5305]
 gi|324967480|gb|ADY58258.1| Deoxyribonuclease I [Planctomyces brasiliensis DSM 5305]
          Length = 330

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 82/291 (28%), Gaps = 36/291 (12%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P     A K+RL S+NI              S          L +  +    D+V +QE+
Sbjct: 54  PAPVFPADKLRLASFNIQVFG---------QSKLGDKVVINRLAEVIRQF--DLVAIQEI 102

Query: 75  GS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            S   ++   F +       +   LI      + +    A   R   +  +  S   +  
Sbjct: 103 RSADQSLMPNFMEIVNKDGSNYHYLIGPRLGRTISKEQYAYVYRSDRIEPIDGSMFTVDD 162

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                      A        G++     I+  +       E            Q   +  
Sbjct: 163 PKDLLHREPTVASFRSRVGEGERFTFTLINCHTDPDEADFEVA----------QLAQVYK 212

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           +++          + GD N   + L   +                       N  K  + 
Sbjct: 213 FVSTFHRKEDDIFLLGDLNVDADDLAPFNSI---------PTVASIVPAGPTNTRKTKQY 263

Query: 254 KIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               D+ +++     +F  +    ++  + D  + +   +SDH P+  ++ 
Sbjct: 264 ----DHILVNLSQTAEFTGRAGVFDMAEHFDISQEQAIDISDHQPVWAEFS 310


>gi|262197113|ref|YP_003268322.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
 gi|262080460|gb|ACY16429.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
          Length = 247

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 81/287 (28%), Gaps = 55/287 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S A  +R  S+NI+                R   +        + LD  I+ LQE+ S  
Sbjct: 10  SAAPPLRAASYNIHQF-----------CGHRWRLNVGRSVAALRALDVPILALQEVLSGR 58

Query: 79  AV-AKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               +         + ST   + H      S        A+  +   +    + L     
Sbjct: 59  VFPRRGLVGPNPSSWLSTALGMQHIAHPTVSAEHGEYGNAILTRLPVLDSGLWDL----- 113

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +      R A+  ++  +   + V+  H                       Q   L D I
Sbjct: 114 ALGWREPRNALYAVLATDAGPLRVVTTHFGLRSS-------------ERINQVYRLLDHI 160

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            Q  ++ +P ++ GDFN            W         +       +   +   +   +
Sbjct: 161 NQ--DTELPTLLLGDFNE-----------WSRHGLVTRAVEEHFATHAPLASYPAVLPIV 207

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           P+D      +     +  +            +  +R SDH P+  + 
Sbjct: 208 PLDRIFWRPSGLVERVYRA----------RGTLFRRASDHRPVIAEL 244


>gi|182626631|ref|ZP_02954375.1| exodeoxyribonuclease III [Clostridium perfringens D str. JGS1721]
 gi|177908025|gb|EDT70604.1| exodeoxyribonuclease III [Clostridium perfringens D str. JGS1721]
          Length = 250

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 75/299 (25%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y K+ DADI  LQE          
Sbjct: 1   MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LDLEGYHQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     +                  L         S  
Sbjct: 91  -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                         D + T+  +  +  F           
Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +           IDYF++  N    + + S    +             SDHCP+
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEIL-----------GSDHCPV 245


>gi|329905898|ref|ZP_08274279.1| hypothetical protein IMCC9480_2684 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547429|gb|EGF32252.1| hypothetical protein IMCC9480_2684 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 326

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 97/316 (30%), Gaps = 35/316 (11%)

Query: 21  AQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             ++R  S+N+  L+             S+ +     + L Q    LDAD++  QE+ S 
Sbjct: 2   PHEIRFASFNVFNLALPGARFYDGQEPYSISQYDDKISWLAQQIDRLDADVIGFQEIFSQ 61

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--VRVLQQSYP-----L 130
           +A+  V  +       +     +   RD       A+  R     V VL +  P      
Sbjct: 62  DALRDVLARTR-HFRDAHHAGSDPQPRDGPLTPSVALVSRLPFAGVPVLHRDLPRQLAIA 120

Query: 131 LGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L    +      R  +++ +   +G  +     H+KS     + + T      L     +
Sbjct: 121 LPDTPTPMTQFTRPILQVPLALPDGGTLQAFVTHMKSKRPDWNPDETEDDPYHLGIASLR 180

Query: 190 WLKDW-----------ITQKKESLVPFVIAGDFNRKINYLGN----------NDDFWKTI 228
            L                      VP V+ GDFN     +                ++ +
Sbjct: 181 SLIRRGTDALGLRYLLTDLLLAQRVPLVVMGDFNDDAGAVSTQLVMGTGRRGKSALYERL 240

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA--YKFLIQESFSEILYNEDDIK 286
             +  +             + +    + +D+ ++ +              E+LY  D + 
Sbjct: 241 FDSLRIQTGRDPSRDVGYTHLHDGAYLTLDHVLVSEEFHPASRYAIGEVLEVLYLNDHLG 300

Query: 287 SRGKRLSDHCPISIDY 302
            R    SDH  + +  
Sbjct: 301 LRLAAASDHGQVLVRI 316


>gi|291514150|emb|CBK63360.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 539

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 85/281 (30%), Gaps = 40/281 (14%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKVF 84
           +S+NI   +  +G ++WKN           +          I+ LQE   +    +AK  
Sbjct: 283 ISFNIRVDNPSDGDNIWKNRK-------QAVITMINRQQPTIMGLQEAQPHQITYLAKQC 335

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-----AKDSFSR 139
           P+  W                  ++   AI  +   V +L +    L          +  
Sbjct: 336 PEYAWYGLGRDTGEAPPKTETYASEECMAIFFQTSIVEMLDKGTFWLSETPNIPSKGWDA 395

Query: 140 AGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             NR     L   +  GK+ +  + HL +   +               +  + + + I +
Sbjct: 396 NYNRSCTWALFRQKTTGKRFYFFNTHLDNSGAV------------ARKESIKLIINKIEE 443

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                +P  +  DFN   +     +   + +           ++++  N  K    +  +
Sbjct: 444 VNSEQLPVFLTADFNSDTDES-CFNPLHQVMKD-ARATAPVTDQEATYNGYKTSGTR-KL 500

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           D+   D      +         +           +SDH P+
Sbjct: 501 DHIFYDNGCVASI---------FQTLKENYGAPYISDHYPV 532


>gi|239906954|ref|YP_002953695.1| exodeoxyribonuclease III [Desulfovibrio magneticus RS-1]
 gi|239796820|dbj|BAH75809.1| exodeoxyribonuclease III [Desulfovibrio magneticus RS-1]
          Length = 254

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 72/302 (23%), Gaps = 76/302 (25%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           LVSWN+N L        W                +     AD+V +QE          F 
Sbjct: 3   LVSWNVNGLRAVVQKGFW---------------DWLAGSGADVVGIQESKIQTGHEADFG 47

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                 + +        K  S          R + + +       +   D       R  
Sbjct: 48  HTDQ--YKTVWCSSTVKKGYSG----VGCFYRAEPLSIA------MELPDPAFAGEGRL- 94

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               + +  ++    +I+  +                     A+ L+           P 
Sbjct: 95  ----LHLEYEEFHFFNIYFPNGGRGPERLAYKLGYYDAFLAHAEELRKH--------KPI 142

Query: 206 VIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+ GDFN                   +L     +         +  F        +    
Sbjct: 143 VVCGDFNTAHTALDLKNAKANEKTSGFLPEERAWLDRFVAAGYVDTFRLFTTEGGH-YSW 201

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           IDYF + +     + +                    SDHCP+ ++
Sbjct: 202 WDYRFKARDRNVGWRIDYFFVSEELRPKVKRAWI-----------DAAVMGSDHCPVGLE 250

Query: 302 YD 303
            D
Sbjct: 251 LD 252


>gi|193216364|ref|YP_001997563.1| endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium
           ATCC 35110]
 gi|193089841|gb|ACF15116.1| Endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium
           ATCC 35110]
          Length = 413

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 87/341 (25%), Gaps = 74/341 (21%)

Query: 3   RKYVLALVF-FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +K ++ L   F  P  +    + ++ ++N   L +    S                    
Sbjct: 4   KKILIFLCLTFFFPIVSFSQIRFKVATYNCLQLDKSGFNSRKSYFKT-----------II 52

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
             ++ DI   QE+    A   +           +          +  D+   +  R   V
Sbjct: 53  NEINPDIFLTQEIKEEAAADSLLSLLNETSISFSRAP-----YINGPDMDNMLFYRDDVV 107

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            ++ Q+               R   E +V+I    + +   HLK+               
Sbjct: 108 SLISQNTIQTS---------PRYLWEYVVKIGSDTLRIYSCHLKASSSESDE-------- 150

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDF-- 224
                +   L++++ +       F+I GD N   N                    D    
Sbjct: 151 QTRLGEVTALRNYLNE-LPENSEFIIVGDLNLYDNAEPAYQKLIADETNNIGRAKDWLAS 209

Query: 225 --WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEI 278
             W       S+           +           D+ +  QN         + +S +  
Sbjct: 210 GSWHNSSTYASIHTQSTRTTDLGDGGSTGGLDDRFDFILTSQNLNDASRIEYVADSMTPF 269

Query: 279 ----------------LYNEDDIKSRGKRLSDHCPISIDYD 303
                                 +     R SDH P+  +++
Sbjct: 270 GNDGNLLNKDINNTANTAVSTSVADALWRASDHLPVIAEFE 310


>gi|146419313|ref|XP_001485619.1| hypothetical protein PGUG_01290 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 720

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 85/327 (25%), Gaps = 41/327 (12%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + S      L+S+N      +  +      +           L++   +   D+V +Q
Sbjct: 371 TTSDSEPDSFTLLSYNTLCQHYAPSKLYKFTPSWALDWEFRRAALKEEVLSYKTDVVCMQ 430

Query: 73  EMGSYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-- 126
           E+ +        P         +F+   R       DS      A   +     +L +  
Sbjct: 431 EVETRTFHDFWVPVMAEIGYKGVFFCKTRSKTMGSVDSKKVDGCATFYKSSKFELLTKMN 490

Query: 127 ---------SYPLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
                    S      KD F+R  N+        L    +G+KI V + HL      +  
Sbjct: 491 FEYNSVCMGSDKYKKTKDLFNRFMNKDNIALITYLQHLESGEKILVTNTHLHWDPAFND- 549

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                    LL +    LK +           VI GDFN   +          ++  +  
Sbjct: 550 -VKALQVGILLEELQGVLKKFGHTDDVKNANVVICGDFNSVKDSAVYQLFSSGSVTKHPD 608

Query: 234 LIRFPKEKDSRC-----------------NANKNLRNKIPIDYFVMDQ-NAYKFLIQESF 275
           L      + +                     N +      IDY      N     +    
Sbjct: 609 LDGRDYGRFTDEGFKHVFKLKSAYDGELPFTNFSPGFTEVIDYIWYTPGNLRVKGLLGKI 668

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            +               SDH  I   +
Sbjct: 669 DDNYLKNCIGFPDAHFPSDHIAIVTKF 695


>gi|227082737|ref|YP_002811288.1| extracellular nuclease-related protein [Vibrio cholerae M66-2]
 gi|298500556|ref|ZP_07010360.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|227010625|gb|ACP06837.1| extracellular nuclease-related protein [Vibrio cholerae M66-2]
 gi|297540725|gb|EFH76782.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 869

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIADVEQFGDAGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|260904213|ref|ZP_05912535.1| exodeoxyribonuclease III [Brevibacterium linens BL2]
          Length = 256

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 81/278 (29%), Gaps = 52/278 (18%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            + +  +  +    D D++ +QE+       + FP++ +           +       + 
Sbjct: 5   RARHDRIGAWLDRSDVDVLAIQELKCK---DEQFPEDLFTS-------RGYEVSFHGLNQ 54

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              +A+  +         P +G  D  S           +      + V  +++ +   L
Sbjct: 55  WNGVAIASRVGLED----PEIGFTDIPSFGEEPVVEARALSATCGGVRVYSLYVPNGREL 110

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKI------------- 215
           D    TY        +  + L   I+ +  +      V+ GDFN                
Sbjct: 111 DHPHYTYK------LEWYRALTADISAQLSETPDKKLVLCGDFNVAPLDEDVWDMAEFDG 164

Query: 216 --NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--------IPIDYFVMDQN 265
             +      D + ++          +              +        + ID+ +   +
Sbjct: 165 LTHVSEPERDAFNSLLGAGLTEVTRQFTPGPGVYTFWDYQRLAFPKKKGMRIDFELASPS 224

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +              D  + +GK  SDH P+ +DY+
Sbjct: 225 LAEKATGAEI-------DREERKGKGASDHAPVIVDYE 255


>gi|325685174|gb|EGD27297.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 275

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 56/304 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWNI++L+     +  +  + R       + +   +LD D++ LQE     +    
Sbjct: 1   MRLISWNIDSLNAALTGTSPRAEMTRG------VLKNLHDLDPDVLALQETKLPASGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +     +  S  +     +       K       + P +GA +     G  
Sbjct: 55  KHQAALADLFPEYYFVWRSSMEPARKGYAGTMFLYKKGLDPVVTRPEIGAPEPMDFEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                      + L        +   
Sbjct: 114 -----ILTLEFPDFYVTQVYTPNAGNGLVRLGDRQEWDKCYRAYLEEL--------DKKK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F +         
Sbjct: 161 PVLASGDFNAAYQEIDLKHPENNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +           ++   G+R  DHCPI
Sbjct: 221 SWWAQRVRTAKANNSGWRIDYWLVSNRLADQVEKS----------EMIETGERA-DHCPI 269

Query: 299 SIDY 302
            ++ 
Sbjct: 270 LLEI 273


>gi|294777430|ref|ZP_06742881.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|294448498|gb|EFG17047.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
          Length = 276

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 83/309 (26%), Gaps = 71/309 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +L L   L+  +A     +RL+++NI   +  + V            D+  +    
Sbjct: 30  MKKTLLLLFTLLLALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 78

Query: 62  KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            ++  ++V LQE+ S          + ++  +     +++             +     I
Sbjct: 79  NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 130

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  K + V  ++  L G      R   R  +    +                   +   
Sbjct: 131 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 177

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                           L+           PF +AGD N +                    
Sbjct: 178 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 214

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             F    D   +          IDY    +   K     S   +              SD
Sbjct: 215 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 265

Query: 295 HCPISIDYD 303
           H P+ I  +
Sbjct: 266 HRPLVIVLE 274


>gi|229158676|ref|ZP_04286734.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
 gi|228624660|gb|EEK81429.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
          Length = 352

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 108/325 (33%), Gaps = 70/325 (21%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + ++ ++NI               G     +S ++T  +   +  + +N ++D   LQ
Sbjct: 52  GNEFKVTTFNIGYGGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFALLQ 111

Query: 73  EMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           E+            +  + K  P         +   +    + N             ++ 
Sbjct: 112 EVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGLST 166

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSL 173
             K      + + L G +    R  +  R  VE  + +N GK + ++++HL +       
Sbjct: 167 FSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHSIPVNNGKHVRLVNLHLSA------- 219

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
              Y     +  QQ ++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P   
Sbjct: 220 ---YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWL 276

Query: 234 LIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSE 277
           +       D       +                      ID F++  N    ++     +
Sbjct: 277 VELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKD 334

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
           + +            SDH P+S  +
Sbjct: 335 LKFEN----------SDHNPVSAVF 349


>gi|258512235|ref|YP_003185669.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478961|gb|ACV59280.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 252

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 75/304 (24%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VSWN+N L              R   +      Y ++ DAD+  +QE        ++
Sbjct: 1   MRFVSWNVNGL--------------RACVNKGAFLPYFESADADVFCIQETKLQAGQIEL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  F++      +S       I                   +       +    R
Sbjct: 47  PIGEAYQQFWNYAERKGYSGTAVFTRI---------------TPLDVRYGFGDGNDPEGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V+ ++  +     S                  L        +   
Sbjct: 92  I-----ITLEFPSFYVVTVYTPNAKRDLSRLPYRLEWEDAFCAYLCAL--------DREK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                              +     +  F     +  +  
Sbjct: 139 PVIACGDLNVAHEEIDIKNAKSNRGNSGFTDEERAKMTELLAAGFVDTFRALHPNVTDKY 198

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N            IDYF++ +     ++     + +             SDHCP+ 
Sbjct: 199 TWWSNMPGVRERNIGWRIDYFLVSERLRDRILDARIDDHVL-----------GSDHCPVV 247

Query: 300 IDYD 303
           ++ D
Sbjct: 248 LEVD 251


>gi|242817518|ref|XP_002486972.1| endonuclease/exonuclease/phosphatase family protein [Talaromyces
           stipitatus ATCC 10500]
 gi|218713437|gb|EED12861.1| endonuclease/exonuclease/phosphatase family protein [Talaromyces
           stipitatus ATCC 10500]
          Length = 334

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 84/314 (26%), Gaps = 28/314 (8%)

Query: 6   VLALVFF-LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +  L +   +   A  +  +R+++ NI   +  +     K   +R       L    +++
Sbjct: 23  LFTLTWIPALEMKAQASLSLRILTHNIRY-ATSQPFRGEKPWAERKQLLLNELVYNTRHI 81

Query: 65  DADIVFLQEMGSYNAVAKVFP-------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           D   + LQE+        +         +  W                S           
Sbjct: 82  DESFICLQEVLHVQLEDILGGLTQAAKAEEQWAYIGVGRDDGEKQGEYSPIIYQPVTWQL 141

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLEN 175
                V     P   +K S+  A  R     +      GK + VL+ HL      D    
Sbjct: 142 HHWETVWLSETPEKPSK-SWDAASTRIVTIGVFRHRATGKFLLVLNTHL-----DDQGPR 195

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWK---TIDPN 231
           +   +  ++      +  ++    +  +   V+AGDFN +           K    +D  
Sbjct: 196 SRYEAARII---LGKINGYLDGSYDETISGVVLAGDFNSQETQEAYQTLTAKESILVDSQ 252

Query: 232 DSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEI--LYNEDDIKS 287
                     +             K  IDY ++                           
Sbjct: 253 KITKATEHYGNEITWTGFGYEDEPKSRIDYILLGPVDKSSDEPHHRWNSIGYAVLASRFD 312

Query: 288 RGKRLSDHCPISID 301
            G   SDH  + +D
Sbjct: 313 DGVWNSDHRAVVVD 326


>gi|317125945|ref|YP_004100057.1| endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
 gi|315590033|gb|ADU49330.1| Endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
          Length = 255

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 68/307 (22%), Gaps = 82/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +R+ ++NI                     D T L    K LDADI+ LQE+         
Sbjct: 1   MRVATFNILNGRVPAD----------QHVDPTGLADAVKRLDADILALQEVDQNQHRSGF 50

Query: 79  -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSY 128
                  A+           +       +   S  D         +A+  +      Q  
Sbjct: 51  ADLTSVAAEAMDAPHHRFVAAIHGSPGATWVASTGDEQPDSAAYGVALLSRYPVKGWQVI 110

Query: 129 PLLGAKDSFSRAG------------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            L                        R AV   V+    +  V+  HL            
Sbjct: 111 RLEPVPFRVPMRFRGRLRPYLVTDEPRVAVLATVDSPVGECTVVGTHLSFIP-------- 162

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                         L+  +    +   P ++ GD N   +                    
Sbjct: 163 --------RWNVHQLRKVVRATLDCREPVILMGDLNMGPDQAERTTGLRAAASHA----- 209

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                               ID+ ++                     D  +    +SDH 
Sbjct: 210 ----------TYPVGAPSEQIDHVLVRGPL--------------TTSDSGAPALPISDHR 245

Query: 297 PISIDYD 303
            +  D +
Sbjct: 246 ALWADVE 252


>gi|288800479|ref|ZP_06405937.1| AP endonuclease domain protein [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288332692|gb|EFC71172.1| AP endonuclease domain protein [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 363

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 89/311 (28%), Gaps = 69/311 (22%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + +    ++++S+NI +   +                   + QY  N  ADIV LQE   
Sbjct: 93  SNAPEGSLKVLSYNIQSFGYEPEDETRDEQNP--------IVQYIANSGADIVCLQEAPK 144

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +V              +  +    ++      +A+  K   +  +  P       
Sbjct: 145 WRIENEVVSTLN--------PIYPYQSEVAHETSGDVLALYSKYPIISTERIPF------ 190

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL----------------------- 173
              +    +V   ++++   I V++ HL+S     +                        
Sbjct: 191 --DSEINLSVAYRIKVDNDTILVVNNHLESNKMTKADKAGFKNMVKGNISNSGTKQESSL 248

Query: 174 -ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
             N  + +    + Q + +   + +     +P ++ GDFN   N    N           
Sbjct: 249 LLNKLALAAQKRAVQVKAVVSVLKKY--ENLPQIVCGDFNEWPNGYALNTL------QKT 300

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               F +  +    +       + ID  +  +    +  +                    
Sbjct: 301 LTNSFVETGNGAGWSYHRSGMYVRIDNILCSKQFKPYKAKVDSEIKT------------- 347

Query: 293 SDHCPISIDYD 303
           SDH PI    +
Sbjct: 348 SDHYPIYCYLE 358


>gi|260770890|ref|ZP_05879819.1| extracellular nuclease-related protein [Vibrio furnissii CIP
           102972]
 gi|260614127|gb|EEX39317.1| extracellular nuclease-related protein [Vibrio furnissii CIP
           102972]
          Length = 877

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/377 (11%), Positives = 92/377 (24%), Gaps = 98/377 (25%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73
             +R+ S+N+ N  +   G    ++   R  S+          +      LDADIV L E
Sbjct: 474 GDLRIASFNVLNYFNSPYGGDANQHGDNRGASNLTEFSMQQAKIVNAILRLDADIVGLME 533

Query: 74  MGSY-----NAVAKVFPKNT---------WCIFYSTERLINHSKR---DSNNDIHTAIAV 116
           + +       A+ ++  +           +            +       ++ I T +  
Sbjct: 534 IENNGFGDGAAIRQLVDQLNERIDDKKKRYQFVAVDSNQDGQTDEKDSVGSDAITTGVIY 593

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
           R K V++LQ     + ++                +   R  +    ++ G    +     
Sbjct: 594 RDKVVKLLQSRVIPMPSQQAPEVLNEEGKVIEDGKNYQRDTLAPTFKVKGGNETITVAVN 653

Query: 165 KSFCFLDSLENTYSP----------------SCSLLSQQAQWLKDWITQKKESLVPFVIA 208
                  +     +P                  +     A  L + + +        VI 
Sbjct: 654 HLKSKGSACWEDAAPVSEGGQGGADADLQGSCENFRVAGAVALGEALAKIDGHK---VIL 710

Query: 209 GDFNRKINYLGN-----------------------------NDDFWKTIDPNDSLIRFPK 239
           GD N                                      DD          L     
Sbjct: 711 GDMNSYGKEDPMLVLTDYTPEKYGKVIQAARNTVIGEQPQFGDDGAVITQGFGYLSAMEL 770

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------- 289
                  +         +D+ ++  +    ++      I   E  +              
Sbjct: 771 AHKDNSWSYSYNDEVGALDHLLVSDSLKLRVVDAMDWHINGGESTLFDYNDEYKGDLPKY 830

Query: 290 ---KRLSDHCPISIDYD 303
               R SDH P  ++ +
Sbjct: 831 ADHFRASDHDPAVVELN 847


>gi|254436903|ref|ZP_05050397.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 307]
 gi|198252349|gb|EDY76663.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 307]
          Length = 236

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 82/288 (28%), Gaps = 55/288 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +A       L S+NI     ++G             +   +        ADIV LQE   
Sbjct: 3   SAMSENAFTLTSYNIRKAIGRDG-----------KRNPERILDVLNAAVADIVILQEADF 51

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                +           +   +I+ +        H    +  +    +   +P+      
Sbjct: 52  RFKGRRAIFSTKDLFERTGLSVIDVAPDHPGLGWH-GNMLLVRKTVRVTSVHPIP----- 105

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            S    R AV   +EI  +K+ ++  HL                    S+QAQ L   I 
Sbjct: 106 LSGLEPRGAVATQLEIGSQKLNLIHAHLGLVP-------------RHRSRQAQDLAAHID 152

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                L P V+AGD N       +    +  +                    +     I 
Sbjct: 153 ----PLQPTVLAGDLNAAGKAPPSLSPIYACLSEVAL---------GPSFPTRWP--MIR 197

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            D    +      L+     +         +  ++ SDH P+S  + F
Sbjct: 198 FDRIFHNSVL--RLVGAQVHD--------SALARQASDHFPVSATFAF 235


>gi|163741385|ref|ZP_02148776.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161385119|gb|EDQ09497.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 241

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 80/283 (28%), Gaps = 55/283 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              ++RL S+NI            K+             Q  +   AD+V LQE      
Sbjct: 8   QPGRLRLASYNIQ-----------KSVGLDLRRRPRRTLQVIEGTGADLVLLQEADKR-L 55

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +      + +  +  ++++     S      A+  R   + +    +  L        
Sbjct: 56  PPRPAALPHFILDEAGWQIVDLGGAGSLGWHGNAVIWRGDGIELQDHGHIPLPG------ 109

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R AV  L +     + V+  HL                     +Q   L + I +  
Sbjct: 110 LEPRGAVWALFQTGLGPLRVVGAHLGLTT-------------KARHEQVHHLAEVIAR-- 154

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           E  +P V AGDFN       +       + P    +           +   LR    +D 
Sbjct: 155 EPALPTVWAGDFNDW-----SRQPVLDHLAPELRFV-------PPRPSFPALRPMGALDR 202

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +              E++ +           SDH P+  D 
Sbjct: 203 IAVSAGL----------EVVDSGVYRARPAHIASDHLPVWADL 235


>gi|60683576|ref|YP_213720.1| hypothetical protein BF4154 [Bacteroides fragilis NCTC 9343]
 gi|60495010|emb|CAH09828.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
          Length = 608

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 88/305 (28%), Gaps = 67/305 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK +L L   L   +A     +RL+++N+   +  +G+            +Y  +    
Sbjct: 1   MRKLLLLLFSALFVLSAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVI 49

Query: 62  KNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            N   DIV +QE+ S  A +    V  +                     +     I +  
Sbjct: 50  NNARPDIVAIQELDSMTARSNRTDVLKELAERTQLHPCFAPAID----YDGGKYGIGILS 105

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +  Q++ L G      R   R  +         +      HL              
Sbjct: 106 KETPLRVQTFALPG------REEARTLLVAEFP----EYVFACTHLSLTEED-------- 147

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIR 236
                   + + L+   +    +  PF +AGDFN   +     D    ++ +        
Sbjct: 148 --------RMKSLEILKSVTANTRKPFFLAGDFNSDADSGFIKDLKSTFQILS------- 192

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                            K  +DY +  +      +  S   I              SDH 
Sbjct: 193 ---NPKQPTYPAS--EPKETLDYLIALKQETPTFVVNSARVI---------DEPLASDHR 238

Query: 297 PISID 301
           P+ ++
Sbjct: 239 PLLVE 243


>gi|303234331|ref|ZP_07320970.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4]
 gi|302494447|gb|EFL54214.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4]
          Length = 253

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 83/306 (27%), Gaps = 78/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++L+SWN+N                              +L+ADI  LQE+    N +  
Sbjct: 1   MKLISWNVNGYRAVMKKGFM---------------DAFNSLNADIFCLQEIKMKENQMTD 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  +             +N   ++   V  K   +       +   D+  R   
Sbjct: 46  EMNIEGYHRY----------SYSANKAGYSGTLVYTKVEPIGVSFGIGIDEHDTEGR--- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++    +  ++++++  +        +               L+D         
Sbjct: 93  ------VITCEYEDFFLVNVYTPNSKQKLERLDYRMVWEDEFHNYLNILRDR-------- 138

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N   N                     +    +  +  +  F      + + 
Sbjct: 139 KPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERNKMSLLLNDGYIDTFRYFYPDKTDE 198

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDYF++  +    L+     + +             SDHCP+
Sbjct: 199 YSYWSYFAKARERNAGWRIDYFIVSDDLKDNLVDAKIHQSI-----------MGSDHCPV 247

Query: 299 SIDYDF 304
            ++ +F
Sbjct: 248 ELEINF 253


>gi|282163799|ref|YP_003356184.1| exodeoxyribonuclease [Methanocella paludicola SANAE]
 gi|282156113|dbj|BAI61201.1| exodeoxyribonuclease [Methanocella paludicola SANAE]
          Length = 255

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 79/304 (25%), Gaps = 76/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R++ WN+N L                         + +  DADIV +QE    +     
Sbjct: 1   MRMLCWNVNGLRAVLKKGF---------------VDWLRREDADIVCIQETKAAAEQMPP 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     +  + ++               ++ +A+  K           +   D   R  
Sbjct: 46  EVTGIPGYHFYSTSPLEK---------KGYSGVALFTKEEPKSVSYGFGIEKYDIEGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +  +  K  +L I+  +                          D++ + K  
Sbjct: 95  -------TIIADYGKFVLLSIYFPNG-------KMSQERLDYKMGFYDAFLDYVDKLKAE 140

Query: 202 LVPFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCN 246
               V+ GD N     L                   ++    + +  +  F   + +  +
Sbjct: 141 GRKVVVCGDVNTAHTELDIARPKENSKKSGFLPMEREWMDKFEAHGFIDTFRVFEKAGGH 200

Query: 247 ANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDYF +  N  K L                      SDHCP+
Sbjct: 201 YTYWDTFTKARERNVGWRIDYFYVSDNLKKNLKGAFIE-----------PDVMGSDHCPV 249

Query: 299 SIDY 302
            ID 
Sbjct: 250 GIDL 253


>gi|121601098|ref|YP_993160.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei SAVP1]
 gi|121229908|gb|ABM52426.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei SAVP1]
          Length = 286

 Score = 83.8 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 83/308 (26%), Gaps = 52/308 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+SWN+                   T D       A+ L D D++  QE+        
Sbjct: 1   MRLISWNVQW-----------RRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              S +  A++         +    +                A+  +        + L  
Sbjct: 50  GGPSGDQYAELAALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              + + +  R A+E+ +      + V+  HL+ +            +   L ++A    
Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSA--QQRLAQVDALRRLHREAAAHA 167

Query: 193 DWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------ 237
                 +    PF         ++ GDFN                D    +  +      
Sbjct: 168 RASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHPG 227

Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             P       +  +     +  D+  +     + L +                  R SDH
Sbjct: 228 KTPPMTAGVYDTAQWSEGPMTCDFAFVTDTLVRRLSRCEI-----------DGTVRASDH 276

Query: 296 CPISIDYD 303
            PI ++  
Sbjct: 277 QPIVLELS 284


>gi|325961961|ref|YP_004239867.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468048|gb|ADX71733.1| Exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3]
          Length = 261

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/279 (8%), Positives = 64/279 (22%), Gaps = 51/279 (18%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +    +  + +  D D++ +QE    +              +     + +       + 
Sbjct: 5   RARADRVEAWLQRSDCDVLAIQETKCKDD----------NFPWELFERMGYEVAHFGVNQ 54

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF- 169
              +A+  +      +   L       +     +     +      I +  +++ +    
Sbjct: 55  WNGVAIASRVGLEDVERTFLDQPSFGKAGKDPVQEARA-MAATCAGIRIWSLYVPNGRSL 113

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------------- 215
            D            L   AQ L       ++      + GD+N                 
Sbjct: 114 DDEHMPYKLKWLESLKTHAQELV-----TQDPQAQVALMGDWNIAPFDEDVWDIDLFINN 168

Query: 216 ---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMD 263
              +        +   +                                    ID+ +  
Sbjct: 169 RSTHVSPPERAAFHAFESAGFTDVVRPYTPGP-GVYTYWDYTQLRFPKKEGMRIDFVLAS 227

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +   S        D  + +GK  SDH P+ ++ 
Sbjct: 228 PALAARVTGASI-------DREERKGKGASDHAPVVVEL 259


>gi|253565090|ref|ZP_04842546.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251946555|gb|EES86932.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 353

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 92/342 (26%), Gaps = 57/342 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++A  F L+      AQ        +  +N+  L +    +   +           
Sbjct: 15  MKKLIIAFNFLLLLAVGGRAQDHADRLYSVAFYNLENLFDTIHDTGKNDYEYLPDAAKGW 74

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           + ++  S    L +    L  D        + + E+ +   +  +  +       +    
Sbjct: 75  NSEKYRSKLKNLSKVLGELSRDKVPAGPAAIGVAEVENRRVLDDLIRQPE---LAAGGYR 131

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H +      I  A+    K       +  L    +  +    R  + +  E+ G K+ 
Sbjct: 132 YIHYEGPDKRGIDCALLYDPKQFTPHATALVLSTPFEGDTIHKTRGFLIVGGELAGDKVC 191

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           ++  H  S    + +           + Q + LKD + +  +  +  +I GD N     L
Sbjct: 192 LIVNHWPSRGAAEPVRV-------HAAMQVKALKDSLMRT-DPDLKLIIMGDLNDDPMDL 243

Query: 219 GN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----- 268
                          + +     +   +D               D  ++     +     
Sbjct: 244 SLAVLGAKKHVEDMTEDDLYNPWWVTLEDKGVGTLLYRGKWNLFDQIILSPTLLQATKGL 303

Query: 269 -------------FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                        F     +          +      SDH P
Sbjct: 304 KYDHNEVFMRDYLFQQDGKYKGAPLRTYGGRVWLDGYSDHLP 345


>gi|165870022|ref|ZP_02214679.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0488]
 gi|190569230|ref|ZP_03022126.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           Tsiankovskii-I]
 gi|227817848|ref|YP_002817857.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. CDC 684]
 gi|164714345|gb|EDR19865.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0488]
 gi|190559670|gb|EDV13659.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           Tsiankovskii-I]
 gi|227003998|gb|ACP13741.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CDC 684]
          Length = 335

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 110/327 (33%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 33  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 92

Query: 71  LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE+            +  + K  P         +   +    + N             +
Sbjct: 93  LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 147

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N GK + ++++HL +     
Sbjct: 148 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHSIPVNNGKHVRLVNLHLSA----- 202

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P 
Sbjct: 203 -----YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPE 257

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 258 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 315

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 316 KDLKFEN----------SDHNPVSAVF 332


>gi|146340267|ref|YP_001205315.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278]
 gi|146193073|emb|CAL77084.1| exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Bradyrhizobium sp. ORS278]
          Length = 262

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 74/300 (24%), Gaps = 70/300 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                        L  + +    DIV LQE+    A    
Sbjct: 1   MKIATFNINN----------------VRRRLPNLLAWLRAAKPDIVCLQELKCTLA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  +    +     L G     S    R
Sbjct: 41  ------EFPVEEIAKAGYGAVWQGQKTWNGVAILARKAEPVLIRTALPGDP---SDKEAR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + I +  ++L +       +  Y  +        + L     +  +  +
Sbjct: 92  YIEAAV-----RGIVIACLYLPNGNPQPGPKFDYKLA------WFKRLHKHAAKFIKDDL 140

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+AGD+N                       +   +   ++            D+    
Sbjct: 141 PVVLAGDYNVAPTPLDIYPTKSWDKDALIQPKSRAAYAALVNQGWCDAIRTLHPDAPMFT 200

Query: 248 NK-NLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                RN+        +D+ ++       L            D         SDH P  I
Sbjct: 201 FWDYKRNRWPRDAGLRLDHLLLSPQLAPRLKTAGV-------DRAIRGEDGASDHAPAWI 253


>gi|330998468|ref|ZP_08322292.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella
           xylaniphila YIT 11841]
 gi|329568574|gb|EGG50379.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella
           xylaniphila YIT 11841]
          Length = 348

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/352 (10%), Positives = 96/352 (27%), Gaps = 64/352 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVR-----LVSWNINTLSEQEGVSLWKN----------- 45
           +++  + +  F++  TA+ AQ+ +     +  +N   L +        +           
Sbjct: 1   MKRMFMVMGLFVLLFTAARAQEKKFGMYAVGFYNQENLFDTIHDEGKNDFEYLPDGAMKW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
           +  +  +    +      +  D        ++ + E+ +   +  +  +       +   
Sbjct: 61  NGMKYFAKLKNMATVLSEMGTDKLPNVGASVIGVSEVENSRVMQDLVEQPPLK---ARGM 117

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
              H +      +  A+    +     +        +   S    R  + +  ++ G  +
Sbjct: 118 KFVHIEGPDRRGVDCALIYNPRFFTPEKSFLQPYIYEAKDSAYHTRGFLTVQGKLAGDDV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
             +  H  S   +                Q + LKD I++     +  ++ GD N     
Sbjct: 178 AFIVCHWPSRAAVSYYRERAGK-------QVRMLKDSISK-ANPGMKIIVMGDMNDDPFS 229

Query: 218 LGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                      +     + +     +                    D  VM  N      
Sbjct: 230 PSMAKALGAKREMKDVGESDLYNPWWNVLTKEGRGTLMYDGKWNLFDQIVMTPNLLNLDG 289

Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
           ++ +S + + + +I SR                           SDH P+ +
Sbjct: 290 KKDYSTLKFFKHEIFSRNYLFQTEGRYKGNTKRTHAGGVWLNGYSDHLPVVV 341


>gi|118617059|ref|YP_905391.1| exodeoxyribonuclease III protein XthA [Mycobacterium ulcerans
           Agy99]
 gi|118569169|gb|ABL03920.1| exodeoxyribonuclease III protein XthA [Mycobacterium ulcerans
           Agy99]
          Length = 264

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 63/278 (22%), Gaps = 50/278 (17%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +    +  + +  D D++ +QE    +                    + +       + 
Sbjct: 5   RTRLPRVLDWLERADVDVLAIQETKCSDT----------QFPALPLFELGYEVAHVGFNQ 54

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              +A+  +      Q         S        A    V      + V  +++ +   L
Sbjct: 55  WNGVAIASRVGIDDVQISFDGQPAWSGKPEVAAAAEARAVGATCGGVRVWSLYVPNGRAL 114

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINY----------- 217
           +    TY             L+D        +   P  +AGDFN                
Sbjct: 115 EDPHYTYKLD------WLAALRDTAQCWLKNDPGAPIALAGDFNIAPTDEDVWNTEFFTG 168

Query: 218 ----LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQ 264
                      +  I                                     ID+ +   
Sbjct: 169 ATRVSEPERKAFNAIVDAQFTDLVRPFTPGP-GVYTYWYYTQLRFPKKQGMRIDFILGSP 227

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ++              + +GK  SDH P+ +D 
Sbjct: 228 ALAGRVVDAQIV-------RDERKGKAPSDHAPVFVDL 258


>gi|329724184|gb|EGG60699.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 269

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 79/270 (29%), Gaps = 28/270 (10%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE--------RLINHS 102
            +D      Y K  + D+V   E     A  K+         Y T               
Sbjct: 5   RADLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEG 62

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
              S       +A+  K     +  +        F    N+  V   +E NGK I V+  
Sbjct: 63  SYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKNIHVIGT 121

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNN 221
           H +S    DS          + ++Q + + D++ +          I GD N         
Sbjct: 122 HTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN-KGTPEF 176

Query: 222 DDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK--FLIQES 274
            D  K ++ ND L                  N        +DY   D++  +   L+ E 
Sbjct: 177 KDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEV 236

Query: 275 FSEILYNEDDIKSRGKRL----SDHCPISI 300
            +E     D        +    SDH PI  
Sbjct: 237 VTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 266


>gi|312958184|ref|ZP_07772707.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6]
 gi|311287615|gb|EFQ66173.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6]
          Length = 292

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 85/292 (29%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI   +  E    +     +        TS+   +       D D+V L
Sbjct: 28  PADSRLRLLSFNIQVGNSTEKYRHYLTRGWQHVLPHKGRTSNLQKIGDLLN--DFDLVAL 85

Query: 72  QEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE    +  +  +          +         R+       +  V  +      + +PL
Sbjct: 86  QEADGGSMRSGYINQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLKPTAIEDHPL 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G K        R A+ +      + + V+ +HL                    + Q  +
Sbjct: 146 PGPKG-------RGAILVRFGEGPEALVVVMMHLALGG-------------RTRNLQLAY 185

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I   K      V+ GD N               +  N  L               +
Sbjct: 186 VRELIGNYKHQ----VLMGDMNTHATD----------LLQNSPLRDLGLLAPQVEATFPS 231

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 232 WRPQRCLDHILLSPTLTLESVQVLAHPI--------------SDHLPVAVEI 269


>gi|299142905|ref|ZP_07036032.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735]
 gi|298575634|gb|EFI47513.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735]
          Length = 313

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 75/256 (29%), Gaps = 31/256 (12%)

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D+V L E+ +   +  +  ++          + N     S +     +A+         
Sbjct: 72  PDLVALCEVENDTVMRDLTKRSLLRQARYEYVMTN-----SLDVRGIDVALLYSPFTFRL 126

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            ++  +           R  +    +I +G  + V  +H  S    +        +    
Sbjct: 127 LNWHAIRVAPIKGMRPTRDILYAAGQIISGDTLHVFVVHAPSRSGGEIATRPNRMAV--- 183

Query: 185 SQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
               + L++ +   K +      +IAGDFN     +       + +     +    K   
Sbjct: 184 ---VKRLQEAVDSVKSNSVSARIIIAGDFNDYTQDVSIQYLISRGLTD---VSASAKGTH 237

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------- 289
                 K       +D+ +  +         + ++  +   D +  G             
Sbjct: 238 GAKGTYKYRGEWGSLDHVLCSEALVPLFRSCTIADFPFLLTDDEVYGGLQPLRNFHGAKY 297

Query: 290 -KRLSDHCPISIDYDF 304
               SDH P+ + +DF
Sbjct: 298 LNGFSDHLPLVVKFDF 313


>gi|182434884|ref|YP_001822603.1| putative phospholipase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178463400|dbj|BAG17920.1| putative phospholipase [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 326

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 91/297 (30%), Gaps = 31/297 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R++S+N    S+                    + + +     D+V +QE     A   
Sbjct: 37  SLRVLSYNAFIFSKTLY------PNWGQDHRAAEIPKTSFFRGNDVVVIQEAFDNGASDA 90

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134
           +   +     Y T  +                       + +  K   V ++ + +    
Sbjct: 91  LLRNSASPYPYQTPVVGRSKSGWDATGGSYAAATPEDGGVTILSKWPIVRKEQF-VFKDA 149

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  N+     ++ +NG ++ V+  H +S     S       +  + S+Q + L  +
Sbjct: 150 CGGDWFSNKGFAYTVLNVNGARVHVVGTHAQSTDPGCSAG----QAAQVRSRQFKQLDAF 205

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNA----N 248
           +      +    V+AGDFN   +            +   ++    P   D+R N+     
Sbjct: 206 LDAKNIPASEQVVVAGDFNVDGHAAEYASFLADAGLSAPETRTGHPYSFDTRDNSIAAER 265

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                +  +D+ +      +    ++      +     S   +      LSDH P+ 
Sbjct: 266 YPDDPREDLDHVLHRTGHARPAGWKNEVIKEESAPWTVSSWGKDYTYTNLSDHYPVI 322


>gi|49481107|ref|YP_039092.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|49332663|gb|AAT63309.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 352

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+            +  + K  P            + +     +        ++   K
Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTFSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P+  +  
Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 279

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++      + +
Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKNLKF 337

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 338 EN----------SDHNPVSAVF 349


>gi|30265117|ref|NP_847494.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Ames]
 gi|47778386|ref|YP_021976.2| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49187928|ref|YP_031181.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Sterne]
 gi|167636557|ref|ZP_02394852.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0442]
 gi|167641786|ref|ZP_02400028.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0193]
 gi|170689357|ref|ZP_02880550.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0465]
 gi|170709101|ref|ZP_02899529.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0389]
 gi|177655394|ref|ZP_02936892.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0174]
 gi|229601351|ref|YP_002869310.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0248]
 gi|254686481|ref|ZP_05150340.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254735688|ref|ZP_05193395.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254744226|ref|ZP_05201906.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Kruger B]
 gi|254750980|ref|ZP_05203019.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Vollum]
 gi|254756978|ref|ZP_05209006.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Australia 94]
 gi|30259794|gb|AAP28980.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Ames]
 gi|47552091|gb|AAT34451.2| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49181855|gb|AAT57231.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. Sterne]
 gi|167510269|gb|EDR85673.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0193]
 gi|167528030|gb|EDR90833.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0442]
 gi|170126003|gb|EDS94902.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0389]
 gi|170666653|gb|EDT17423.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0465]
 gi|172080145|gb|EDT65239.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0174]
 gi|229265759|gb|ACQ47396.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0248]
          Length = 352

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 110/327 (33%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE+            +  + K  P         +   +    + N             +
Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N GK + ++++HL +     
Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHSIPVNNGKHVRLVNLHLSA----- 219

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P 
Sbjct: 220 -----YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPE 274

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349


>gi|320158549|ref|YP_004190927.1| hypothetical protein VVM_01457 [Vibrio vulnificus MO6-24/O]
 gi|319933861|gb|ADV88724.1| hypothetical protein VVMO6_03702 [Vibrio vulnificus MO6-24/O]
          Length = 322

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 102/318 (32%), Gaps = 39/318 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + + S N+       G     +   +        T L    + ++AD+V  QE+ S +A+
Sbjct: 2   ITIASCNLFNFLAPPGAYYEFSNILTDNEWNKKTTWLTLQLRAINADVVAFQEVFSPDAL 61

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-------GA 133
             +     +  ++      + +     +    AIA R   +      +            
Sbjct: 62  NTLTSDLGYP-YFVCLDTPHVTDEFIYSKPVLAIASRWPVIESRLVRFKDCFGDYSENSD 120

Query: 134 KDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSL--------- 183
             ++++  +R  +  ++E+    +  V+ +HLKS             + +          
Sbjct: 121 SVTYNKEFSRLPLHAVIELPIIGLCDVITLHLKSQRPTRWQTQQIDQADNTPPSDPVGSW 180

Query: 184 -----LSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP------N 231
                   +A  L  +I +       P VI GDFN  IN         ++  P      +
Sbjct: 181 LSTVQRGWEAVLLSQYIKKIYASHARPMVIMGDFNANINSTELKPLIDESNTPLLKDVRD 240

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------I 285
               +     +++   + +    + +DY ++ +   +   Q+          D       
Sbjct: 241 WLREQPIFSDEAQKATHYHGSQGLILDYLLLSEEFAQQNAQQRGKITHLVVWDKHLVNPS 300

Query: 286 KSRGKRLSDHCPISIDYD 303
               +  SDH  +++  D
Sbjct: 301 FEVDQFASDHAFVAVTID 318


>gi|258620504|ref|ZP_05715542.1| Nuclease-related protein [Vibrio mimicus VM573]
 gi|258587383|gb|EEW12094.1| Nuclease-related protein [Vibrio mimicus VM573]
          Length = 869

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/373 (13%), Positives = 95/373 (25%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  S+          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGGNRGASNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQLNSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202
           HLKS                      +      +     A  L D + +           
Sbjct: 653 HLKSKGSACWEDAAPVEQGGQGGQDLDYQGACENFRVAAAVALGDALGKIDGHKVILGDM 712

Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  P ++  D+             N  I  +    D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYNDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|189184130|ref|YP_001937915.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
 gi|189180901|dbj|BAG40681.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
          Length = 261

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 71/306 (23%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++WNIN                       LL++     + DI+ LQE        ++
Sbjct: 1   MKIITWNIN----------------SVRMRIPLLQRLVHLYNPDIIALQE---TKVEDRL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP            L       S    +  +A+  +          L   +         
Sbjct: 42  FP------VTECINLGYKYITYSGQKSYNGVAILSRISFESTFVINLYNGEKR------- 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + IN  ++ + + ++ +    D      +           ++  W    K    
Sbjct: 89  -----HIAINIGELSIHNFYVPAG--GDIPNANVNIKFKHKLCYVDFMNAWFLNNKSKKD 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N                               I   D +             
Sbjct: 142 KIILLGDLNIAPLESDVWSSYQLRNVVSYTDIERKKLMHNITSFDWIDAVRFFSGKHEKL 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +       +                      SDH P
Sbjct: 202 YSWWSYRNVDWSKFDRGRRLDHIWISHPLESKIKSCIII-------KDARGWDMPSDHVP 254

Query: 298 ISIDYD 303
           + ++ +
Sbjct: 255 VMLEIE 260


>gi|332291514|ref|YP_004430123.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169600|gb|AEE18855.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 358

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/324 (11%), Positives = 76/324 (23%), Gaps = 58/324 (17%)

Query: 25  RLVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYT----LLRQYAKNLDAD------ 67
            +  +N+  L +        +     +     T   Y      + +   ++  D      
Sbjct: 36  TIAFYNVENLFDTINDPITYDDDRTPEGKDHWTEKIYQDKVSNIARVIADIGKDVTKNSP 95

Query: 68  -IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RV 123
            I+ L E+ +   V  +            +  I H        I  A+  +K+       
Sbjct: 96  AIIGLAEIENRKTVEALANDPQ---LLPRDYGIVHYDSPDRRGIDVALLYQKRLFKPLFT 152

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            +    +    +   R   R  + +   ++G  I ++  H  S    ++           
Sbjct: 153 SKHELLIYEIDNPSKRKYTRDQLLVSGLLDGDMIHIIVNHWPSRSGGEAKSRKKRMD--- 209

Query: 184 LSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLI 235
               A  L   IT   ++  P    +I GD N                  K +   +   
Sbjct: 210 ----AASLTKKITDSLQNNDPYAKIIIMGDLNDDPTNASVKKVLQTQRKIKKVRDKELYN 265

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRG 289
                                 D  ++               +       Y  +      
Sbjct: 266 PMESMFKKGIGTLAYRDGWNLFDQIIISAPLLDDDYTSFRYYKAGIYNKSYLSNPKGRYK 325

Query: 290 KRL-------------SDHCPISI 300
                           SDH P+ I
Sbjct: 326 GYPYRSFANGGYTGGYSDHFPVYI 349


>gi|258625717|ref|ZP_05720596.1| Nuclease-related protein [Vibrio mimicus VM603]
 gi|258581955|gb|EEW06825.1| Nuclease-related protein [Vibrio mimicus VM603]
          Length = 869

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 96/373 (25%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  S+          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGGNRGASNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSY-----NAVAKVFPKN---------TWCIFYSTERLINHSKRDSNND---IHTAIAV 116
           + +      +A+A++  +           +            +    +     I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQLNNQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           HLKS         +           L  Q                   +     VI GD 
Sbjct: 653 HLKSKGSACWEDAAPVEQGGQGGQDLDYQGACENFRVAATVALGDALSKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLILTDYTPEKYGKTIRAARNTYIAGVEQFGDAGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|170665740|gb|ACB29409.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
          Length = 538

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 86/317 (27%), Gaps = 76/317 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73
           P      + V++++WN+N L        +               Q A+  + DI+ LQE 
Sbjct: 267 PPLPEGTKCVKVMTWNVNGLRGLLKFESFSA------------LQLAQRENFDILCLQET 314

Query: 74  ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
              +     + K         F+S            +   ++  A+  +   +  +    
Sbjct: 315 KLQVKDVEEIKKTLIDGYDHSFWS---------CSVSKLGYSGTAIISRIKPLSVRYGTG 365

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQ 189
           L   D       R      V       ++++ ++ +    L  L          LS   +
Sbjct: 366 LSGSD--HDTEGRI-----VTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIK 418

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSL 234
            L+           P V+ GD N     +   +                       +   
Sbjct: 419 ELEK--------SKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTEEERQSFGANFLDKGF 470

Query: 235 IRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           +   +++            +           +DYF++ Q+    +            D  
Sbjct: 471 VDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVH-----------DSY 519

Query: 286 KSRGKRLSDHCPISIDY 302
                  SDHCPI +  
Sbjct: 520 ILPDINGSDHCPIGLIL 536


>gi|170782595|ref|YP_001710928.1| hypothetical protein CMS_2252 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157164|emb|CAQ02344.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 264

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 73/283 (25%), Gaps = 37/283 (13%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKV 83
           +++ NI             +   R       L ++ +     ++ +QE  S    A+A+ 
Sbjct: 3   VMTCNIRLARPSTEPGDPDHWADREPV----LARFLQLEQPTVLGVQEALSAQLPAIARA 58

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +    +               ++    +    +         P L    S+  +  R
Sbjct: 59  LPHHRMLGYGRDGGSGGEYSAIFYDERRLDVVAWDQF---WLSDLPELIGSRSWGCSTTR 115

Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            A         +G +   L+ HL               S     + A  + + + +    
Sbjct: 116 IATWARFRDRRSGAEFVHLNTHLDH------------ESELARVKSADLITERLQEVAS- 162

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----IPI 257
             P V+ GDFN         D   +     D+                   +       I
Sbjct: 163 GAPVVVTGDFNAPAEESAAYDILTRDAGLADTWTTAAHHATPGIGTFTAYGDPVPEGERI 222

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           D+ +                +    +     G+  SDH  +  
Sbjct: 223 DWILAGD---------GVEVVDSAINPYTYEGRSPSDHAAVQA 256


>gi|302186656|ref|ZP_07263329.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae 642]
          Length = 233

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 41/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107
              LR+  + + ADIVFLQE+     +   +V    T   +     S      + +    
Sbjct: 12  LPELREAVRTVSADIVFLQEVHGEHQSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVY 71

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            D     A+  K   +  ++  +     S      R  +  ++E+      V  + +   
Sbjct: 72  PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILEVPHAG-RVHAVCVHLG 125

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         S   QQ + L + + +      P ++AGDFN              +
Sbjct: 126 LR-----------ESHRRQQLKLLNELMAR-IPEGEPVIVAGDFNDWRQRADE------S 167

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +  +     F +   +   +       + +D   +           S             
Sbjct: 168 LQGSGLHEVFVERFGAPAKSFPARWPLLRLDRIYVRNATSHRPKVLS-----------SR 216

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P++++  
Sbjct: 217 PWSHLSDHAPLAVELT 232


>gi|242277753|ref|YP_002989882.1| exodeoxyribonuclease III [Desulfovibrio salexigens DSM 2638]
 gi|242120647|gb|ACS78343.1| exodeoxyribonuclease III [Desulfovibrio salexigens DSM 2638]
          Length = 255

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 76/304 (25%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N        +                 ++ +  +AD+V +QE     A    
Sbjct: 1   MKIYSWNVNGYRAVIKKNFN---------------EWFEQSNADVVMIQE---TKAHPDQ 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P     I                   ++  A   +   +        G  D   +   R
Sbjct: 43  IPDKNRNIEGYESLWNWSKV----KKGYSGTACFTRQPVLSHS----FGLTDEKYQGEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +        ++ ++ +I+  +    D              + A+ L+           
Sbjct: 95  VVLM-----EYEQFYLFNIYYPNGQMSDERLEYKMGFYDSFLEYAEELRK--------KK 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA-------NK 249
           P V+ GDFN     +   +    +       I+                           
Sbjct: 142 PIVVGGDFNTAHKEIDLKNPKANSERSGFLPIERAWLDKFIEHGYVDTFRMFDDSPGKYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + +     +                      SDHCPI I
Sbjct: 202 WWSYRFNARKNNAGWRIDYFFVSEELKHNVKNAWIE-----------SDIMGSDHCPIGI 250

Query: 301 DYDF 304
           +  F
Sbjct: 251 ELSF 254


>gi|189465268|ref|ZP_03014053.1| hypothetical protein BACINT_01614 [Bacteroides intestinalis DSM
           17393]
 gi|189437542|gb|EDV06527.1| hypothetical protein BACINT_01614 [Bacteroides intestinalis DSM
           17393]
          Length = 368

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 82/294 (27%), Gaps = 48/294 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
              +++S+NI      +G                 +  Y KN  ADI+ LQE  +  +  
Sbjct: 102 NSFKVLSYNIMGF---DGAVKKDGENP--------ILNYLKNSGADILCLQEYQTIESSH 150

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  K+                  S       IA   K   +  +    +   +  +   
Sbjct: 151 YLSQKDVEKA-LKDYPYHKIQTVGSGKGHTNRIACYSKYPILSSRRLDYVSEYNGSAVYE 209

Query: 142 NRRAVELLVEING---------KKIWVLDIHLKSFCFLDSLENTY------SPSCSLLSQ 186
            +   + ++ IN          +   V +  LKS                 + + ++   
Sbjct: 210 LKIGEDTVMLINNHLESNKLTKEDKVVYESMLKSPETKKVKSGARLLIRKLAEASAIRGS 269

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           QA  +   I          ++ GDFN        +    + ++       F +       
Sbjct: 270 QADSIAQKIA--ASQHPYIIVCGDFNDTPISYA-HRVIGQGLND-----TFTQSGRGLGI 321

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +    +    ID  +  +N   +             +    R  + SDH PI  
Sbjct: 322 SYNQNKFYFRIDNILASKNLKSY-------------NCTVDRSIKESDHYPIWC 362


>gi|77458095|ref|YP_347600.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf0-1]
 gi|77382098|gb|ABA73611.1| putative exodeoxyribonuclease [Pseudomonas fluorescens Pf0-1]
          Length = 264

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 81/304 (26%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +K+R+ ++N+N L                 +    L ++ +    DIV LQE        
Sbjct: 2   KKMRIATFNVNGL----------------RARLPNLLEWLRREQPDIVCLQE-------- 37

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  ++ + L+    L G  D      
Sbjct: 38  --LKMLDSAFPAADLEAAGYGAIWHGQASWNGVAILARDAQPLESRRGLPGDPDDKHSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV  ++        V  ++L +       +  Y  +        + L  +    + S
Sbjct: 96  LEAAVHGVL--------VGCLYLPNGNPQPGPKFDYKLA------WFERLIKYARDLQSS 141

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+AGD+N     L                   + ++ +                  
Sbjct: 142 DHPVVLAGDYNVVPTDLDIYNTRSWLKDALLQPESRECYQRLLDQGWTDSLRHLYPEDRL 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ +++     +L +          D         SDH P 
Sbjct: 202 YTFWDYFRQHWQKNSGLRIDHLLLNPTLSPYLHEAGV-------DAWVRNEPHASDHAPT 254

Query: 299 SIDY 302
            I  
Sbjct: 255 WIRI 258


>gi|304385589|ref|ZP_07367933.1| exodeoxyribonuclease III [Pediococcus acidilactici DSM 20284]
 gi|304328093|gb|EFL95315.1| exodeoxyribonuclease III [Pediococcus acidilactici DSM 20284]
          Length = 251

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 75/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                             LDADI  +QE          
Sbjct: 1   MKLISWNVNGLRAAVKHGF---------------LDVFNELDADIFCVQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  AV  K   V       +   D   R    
Sbjct: 45  LDLPGYHQYWNYAEKKGY----------SGTAVFTKREPVAVSYGLGIPEFDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++  +  +        +             + L D          
Sbjct: 91  -----VITLEYEKFFLVTCYTPNSQPELRRLDYRMNWDDAFRAYVKQLAD--------TK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  +  +     +      +    
Sbjct: 138 PVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQKFTELLQSGFTDTYRYFYPDKEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV  Q   K L        ++            SDHCPI 
Sbjct: 198 SWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKIHTEIF-----------GSDHCPIE 246

Query: 300 IDYD 303
           +D +
Sbjct: 247 LDLN 250


>gi|119226210|ref|NP_001073171.1| tyrosyl-DNA phosphodiesterase 2 [Danio rerio]
 gi|102230105|gb|ABF70183.1| Ttrap [Danio rerio]
          Length = 369

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 91/294 (30%), Gaps = 48/294 (16%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +     K+ ++SWN++ L         +            L  Y      D+VFLQE+  
Sbjct: 116 SEVEDSKLSIISWNVDGLDTLNLADRARG-----------LCSYLALYTPDVVFLQEL-- 162

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                       +  +     +       S++   T I +RK  V+ L+           
Sbjct: 163 ---------IPAYVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTT-- 211

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   V  +G+K++++  HL+S                  ++Q + +   I 
Sbjct: 212 ---QMMRNLLIAQVTFSGQKLYLMTSHLESC----------KNQSQERTKQLRVVLQKIK 258

Query: 197 QKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +        + AGD N +               D W+ +   +   R+  +  +  N   
Sbjct: 259 E-APEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTV 316

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++   D   +     K     +   +     +    G+  SDH  I   ++
Sbjct: 317 PYVSRCRFDRIFLR--FAKTRPAVTPDHMALIGMEKLDCGRYTSDHWGIYCTFN 368


>gi|319899428|ref|YP_004159525.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73]
 gi|319403396|emb|CBI76964.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73]
          Length = 272

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 81/307 (26%), Gaps = 72/307 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--AKV 83
           + +WNIN                      + + QY      DI+ LQE    + +   + 
Sbjct: 5   IATWNIN----------------SIRFRLSQVLQYLDICSVDILCLQETKCSDDLFPREF 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +                +    +  +A+  +   V  +       +D        
Sbjct: 49  FEAAGYQYIA-----------LNGQKSYHGVAIISRLPFVSVEKRFFCHKEDCRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +++E++G++I + + ++ +    D  +   +          + +   I   +E  +
Sbjct: 93  --LSVVIELHGRRIRIHNFYIPAG--GDEPDVNKNEKFRHKLDFLEEMSS-IRADQEDGL 147

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N                   +     +           +     +       
Sbjct: 148 ESLLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETERLQALCREGGWVDLMRMKFPVPIKL 207

Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     N   F+                    + SDH P
Sbjct: 208 YTWWSYRARDWALADRGRRLDHVWSSPNLAAFVKD-------LVIFRDARGWSQPSDHVP 260

Query: 298 ISIDYDF 304
           +   +DF
Sbjct: 261 VQTLFDF 267


>gi|226222950|ref|YP_002757057.1| hypothetical protein Lm4b_00342 [Listeria monocytogenes Clip81459]
 gi|225875412|emb|CAS04109.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
          Length = 257

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 74/282 (26%), Gaps = 36/282 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E         +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQMCD-M 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++   +  +         P + +  S +    R
Sbjct: 54  KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFILLQEGHFWLSETPEVPSIHSTAM-FPR 112

Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             V   +E   +GK+ ++ + HL                       A  L        + 
Sbjct: 113 ICVWGKLEDSTDGKQFYIFNTHLDHIS-------------EEARLFASQLLLHKASLIQE 159

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPID 258
            +P ++ GDFN + +    N    +  D         K      +  + LR       ID
Sbjct: 160 DLPVILLGDFNTEPSTPTYNLITQRYQDAQLLSKTPVKGPLGSFHDFQPLRPESELEKID 219

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Y  +            F    Y     +  G   SDH P+  
Sbjct: 220 YIFVSNE---------FHICSYETSTDEIDGCSASDHFPVMA 252


>gi|71736423|ref|YP_275358.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298487634|ref|ZP_07005675.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71556976|gb|AAZ36187.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157726|gb|EFH98805.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 242

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 51/286 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79
           + +++ N++                        LR+  + + ADIVFLQE+     S+  
Sbjct: 1   MNVLTMNMHMGFGIFNRRF----------ILPELREAVRTVSADIVFLQEVHGEHQSHAR 50

Query: 80  VAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             K +P  +   F +     +  + +     D     A+  K   +  ++  +     S 
Sbjct: 51  SVKDWPTISQYEFLADSMWNDFAYGRNAVYPDGDHGNALLSKYPIIQHENLDI-----SI 105

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  +  ++E+      V  + +                 S   QQ   L + + +
Sbjct: 106 HGTEQRGLLHCILEVPYAG-RVHAVCVHLGLR-----------ESHRRQQLNLLAELMER 153

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P ++AGDFN               ++       F +   +   +       + +
Sbjct: 154 -LPEGEPVIVAGDFNDWRQRAD------ALLEGTGLHEVFVERFGAPAKSFPARWPLLRL 206

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +           S                 LSDH P++++  
Sbjct: 207 DRIYVRNATSHRPKVLS-----------SRPWSHLSDHAPLAVELT 241


>gi|320582065|gb|EFW96283.1| Component of the CCR4-NOT transcriptional complex [Pichia angusta
           DL-1]
          Length = 762

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 94/329 (28%), Gaps = 42/329 (12%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           +++ +    L+S+N      +  +      +           L     +   +I+ LQE+
Sbjct: 413 SSTSSNSFTLMSYNTLCQHYATPKFFKYTPSWALAWEYRRQKLTDEILSYKTNIICLQEV 472

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPL 130
            +        P      + S     + ++  ++ +       A   +     ++ +    
Sbjct: 473 ETKTYEEYWVPLMESNGYKSVFHCKSRARTMNDKNAKKVDGCATFFQTSMFELIDKKIIE 532

Query: 131 LG-----------AKDSFSRAGNRR----AVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
            G            +D F+R  N+        L     G KI + + HL      + ++ 
Sbjct: 533 YGRVVMTQDKYKKTEDIFNRFMNKDNIASISILQHIPTGNKIVLANTHLHWDPEFNDVKT 592

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN--------------- 220
               +  L   +   LK   ++ + + +P VI GDFN + +                   
Sbjct: 593 -MQVAVLLEELRVLLLKYTNSKDELNKIPLVICGDFNSQTDSAVYQLFSQGSVKEHYDIK 651

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSR----CNANKNLRNKIPIDYFVMD-QNAYKFLIQESF 275
             D+ K      +     K            N +      I+Y            +    
Sbjct: 652 GRDYGKFTSEGCTHPFHLKSAYGAINELPFTNFSPTYTNVIEYIWYSTGTLSVRGLLGEM 711

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                           +SDH P+   ++F
Sbjct: 712 DPNYAKRVIGLPSADFVSDHLPLISKFEF 740


>gi|89889838|ref|ZP_01201349.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89518111|gb|EAS20767.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 329

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/331 (10%), Positives = 78/331 (23%), Gaps = 63/331 (19%)

Query: 22  QKVRLVSWNINTLSEQEGV-----------SLWKNSVKRTTSDYTLLRQYAKNLD----- 65
           ++  +  +N+  L +                  + + +R       L      +      
Sbjct: 9   EQYTVAFYNLENLFDVHNDEHILDEDFTAQGRKQWTPQRYQKKLQKLSDAISKVGVLQTG 68

Query: 66  --ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
               I+ + E+ +   +  +  +         +  I H        I  A+  RKK   V
Sbjct: 69  KLPAIIGVAEVENKKVLEDLIEQPK---LVKGDYGIIHYNSPDERGIDVALLYRKKLFTV 125

Query: 124 LQQSYPLLGAKDSFSRA-GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
              S   +            R  + +   ++G  + +   H  S        N       
Sbjct: 126 ESSSPIAVDVTMPNDEPDRTRDILYVKGFLSGMPLHLYVNHWPSRRDGAQSTN------E 179

Query: 183 LLSQQAQWLKDWITQKKESLVP------------FVIAGDFNRKINYLGNNDDFWKTIDP 230
                A+ L   +                      ++ GDFN         ++       
Sbjct: 180 KRVTVAKQLMSHVNNVDPHNDRTNQEKHLLEGTNIIVMGDFNDDPENDSIRNEILPYGFQ 239

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE----------------- 273
           N +       + S  +  K        D  ++  +    +                    
Sbjct: 240 NVTAPLKKFHRGSLNHNFKWNLF----DQIMVSDSLINDVPDALYFHQADIFDDIMLRQW 295

Query: 274 --SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +          ++     SDH P+ +  
Sbjct: 296 KGKYRGQPARTFVGRTYKGGYSDHFPVYMIL 326


>gi|301612062|ref|XP_002935554.1| PREDICTED: deoxyribonuclease-1-like isoform 1 [Xenopus (Silurana)
           tropicalis]
          Length = 353

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 88/301 (29%), Gaps = 29/301 (9%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L ++  +  C        ++ S+NI   S                    LL +     + 
Sbjct: 3   LLVLVAVTACFLQAGFSFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE- 52

Query: 67  DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            ++ ++E+      A+  +  + +     +   LI+     S+     A   R+  V+ +
Sbjct: 53  -VIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYIYREDIVKPV 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +  +   G ++  + +  R             +  +           S +       +L 
Sbjct: 112 EWYHYDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAVMEVDALY 167

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                  +         +   +I GD+N   +Y+         +   + L     +K+  
Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVAARHWPIIRLRHAEELAWLIGDKEDT 221

Query: 245 CNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301
             +          D  V         +I  +     Y+     +    K +SDH PI ++
Sbjct: 222 TVSTNTN---CAYDRMVAGGQQLQSGIIPGTAKAFNYHVAYDLTYEMAKAVSDHYPIEVE 278

Query: 302 Y 302
            
Sbjct: 279 L 279


>gi|298706356|emb|CBJ29365.1| potential endonuclease [Ectocarpus siliculosus]
          Length = 696

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/328 (11%), Positives = 90/328 (27%), Gaps = 64/328 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           AS  ++ R+++WNIN L +                    ++Q     +ADIV  QE+   
Sbjct: 18  ASAEREARILTWNINGLRKVAASHGG-------------VQQLLDQFNADIVCFQEIKIT 64

Query: 78  NA---VAKVFPKNTWCIFYSTERLI---NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            A     ++     +  F++  +L    ++S   +     + +        +   ++   
Sbjct: 65  RAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGS 124

Query: 132 GAKDSFSRAGNRRAVEL------LVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
                  R  +   +        ++  +     + +++        D  +       +  
Sbjct: 125 PGSFVGERRLSPDRLAALDSEGRVLVTDHGHFVLFNVYAPCVSSSSDDEKEKTEDRRAFK 184

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------------DDFWKTIDP 230
                 L+  I + +      V+ GD N   + L +                     +  
Sbjct: 185 RDFLATLEARIFEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGL 244

Query: 231 NDS----------LIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQESFS 276
                         +   ++    C   +           IDY +   +     ++    
Sbjct: 245 GSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRA--- 301

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304
                           SDHCP+   + F
Sbjct: 302 -------CDIMPDFLGSDHCPVRARFAF 322


>gi|260597181|ref|YP_003209752.1| hypothetical protein CTU_13890 [Cronobacter turicensis z3032]
 gi|260216358|emb|CBA29386.1| Uncharacterized protein ybhP [Cronobacter turicensis z3032]
          Length = 270

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 75/287 (26%), Gaps = 51/287 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + +++ N +                        LR   + + ADIV LQE+   + V  
Sbjct: 26  SLNVLTINTHKGFTAFNRRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 75

Query: 83  V----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  T   F +     +++        + H   AV  +                S
Sbjct: 76  LHVENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 130

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   +   G    +  I +                 +    Q   L + + 
Sbjct: 131 VPGTEKRGVLHCRITPPGFPKAIHVICVHLGL-----------KEAHRQAQLMMLAELVN 179

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKI 255
                  P V+AGDFN             + +     L   F +               +
Sbjct: 180 S-LPEGEPVVVAGDFNDW------RQQANRILRKEAGLDEVFTRAHGRPARTFPVSFPLL 232

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D   +   +                       + LSDH P++++ 
Sbjct: 233 RLDRIYVKNASAS-----------APTALPLRNWRHLSDHAPLAVEI 268


>gi|209694862|ref|YP_002262790.1| hypothetical protein VSAL_I1331 [Aliivibrio salmonicida LFI1238]
 gi|208008813|emb|CAQ79016.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 338

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 94/329 (28%), Gaps = 50/329 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + +   + N+    E            + +         +     L++D++  QE+ S  
Sbjct: 5   ESITFTTINMFNFVEPPNAYYDFENILTQEEWQKKQDWFKNRITTLNSDVIGFQEVFSPE 64

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSF 137
           A+  +     +  F + +   +       +    A A R   V      +     A+   
Sbjct: 65  ALEALVNSLGYPYFCTVDEPKSEDG-YVFHSPVVAFASRYPIVSSQPVIAKSEQLARFGI 123

Query: 138 SRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSP----------------- 179
               NR  V   +++    +     +H KS    D +E                      
Sbjct: 124 EFEFNRVPVHASIDLPHLGVTDCYVVHFKSQRPKDPIEIDGIEEPESTPLTQLHDEQLGS 183

Query: 180 --SCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
             S +    +A  L  +I TQ+K+S  P V+ GDFN+ + +          +  +     
Sbjct: 184 WLSSAQRGLEANTLHQYITTQRKKSSQPVVLMGDFNKPLFHNEFIGLLSHQLRYDKFSTD 243

Query: 237 F------------------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
           +                      + R + +        +DY ++                
Sbjct: 244 YLTTFQLKDSWDIYSQLKGTDLLEERVSTHYYGAKGSVLDYILLSNEFDSSYSGSLLEVT 303

Query: 279 LYNEDDI------KSRGKRLSDHCPISID 301
            Y   D+          +  +DH  +SI 
Sbjct: 304 EYRVVDLHIVNPRFDIDQFSTDHALVSIT 332


>gi|196039392|ref|ZP_03106697.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus NVH0597-99]
 gi|196029552|gb|EDX68154.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus NVH0597-99]
          Length = 352

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 105/322 (32%), Gaps = 64/322 (19%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + ++ ++NI               G     +S ++T  +   +  + +N ++D   LQ
Sbjct: 52  GNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFALLQ 111

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKK 119
           E+   +   + F  N              S   + +                  ++   K
Sbjct: 112 EVDIKSM--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPVTSPMGYAEAGLSTFSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P   +  
Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLVEL 279

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 280 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 338 EN----------SDHNPVSAVF 349


>gi|257437815|ref|ZP_05613570.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii A2-165]
 gi|257199738|gb|EEU98022.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii A2-165]
          Length = 263

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 77/305 (25%), Gaps = 77/305 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++L+SWN+N L                             LDADI  +QE       A
Sbjct: 12  QDMKLISWNVNGLRACLTHDF---------------AASFAALDADIFSVQETKMQPGQA 56

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
              P+      YS E              ++  A   K   +   +       D   R  
Sbjct: 57  DFAPEGYTEYTYSAE-----------KKGYSGTACWCKTAPLAVTTGIGREEHDHEGR-- 103

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 L +E  G   ++++ +  +                         + ++ +  ++
Sbjct: 104 -----VLTLEYPG--FYLVNCYTPN-------SQDGLKRLDYRMTWEDAFRAYLLE-LDA 148

Query: 202 LVPFVIAGDFNRKINYLGNNDD----FWKTIDPNDSLIRFPKEKDSRCNA---------- 247
             P ++ GD N     +   +             +             +           
Sbjct: 149 KKPVILCGDLNVAHTEIDIKNAKTNRMSAGFTDQERAKMTELLAAGFTDTFRAVHPDEVK 208

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYF++       +        ++            SDHCP+
Sbjct: 209 YSWWSYRFHAREKNAGWRIDYFIVSNRIADKVTAAEIHNEVF-----------GSDHCPV 257

Query: 299 SIDYD 303
            +  D
Sbjct: 258 ELVID 262


>gi|109066841|ref|XP_001103689.1| PREDICTED: endonuclease/exonuclease/phosphatase family
           domain-containing protein 1-like isoform 1 [Macaca
           mulatta]
          Length = 569

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 77/296 (26%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKK-NVRVLQQSYPL 130
             +       +  +                         +          V +       
Sbjct: 312 CTELNQPTLPNMRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGVELRDAGSQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +     S   + + S          
Sbjct: 372 SSPSNGHGKPAGPSPYLARFKVGSHDLTLVNLHLAALTLPGSENPSKNHSDGHR---LAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +    +      I   +              + KN
Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  + 
Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538


>gi|83953799|ref|ZP_00962520.1| hypothetical protein NAS141_06228 [Sulfitobacter sp. NAS-14.1]
 gi|83841744|gb|EAP80913.1| hypothetical protein NAS141_06228 [Sulfitobacter sp. NAS-14.1]
          Length = 235

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 77/280 (27%), Gaps = 55/280 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             R+ S+N+      +              D   + +  + L ADIV LQE         
Sbjct: 5   PFRIASYNMRKAMGTDR-----------KRDPARILRVIQTLTADIVVLQEADMRLGPRP 53

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    +      S      A+ +R +   +  +   L G          
Sbjct: 54  SALPLDQVTAQTGLIAVPVPSEVSIGWHGNAVLLRPEAELIEVKHLNLPGM-------EP 106

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+ +  ++    + ++  HL                      Q   L   +  +  S 
Sbjct: 107 RGAMVVDFDLRDIPLRIIATHLGL-------------MRRSRRAQLSALIAHLDAQ--SK 151

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P +IAGD N     +G      +             +  +   +         +D   +
Sbjct: 152 RPTLIAGDMNEWSLNVGLGRLAHQF------------DIYAPGKSYHARLPLAALDRIAV 199

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D      +I     E            +R SDH PI +D+
Sbjct: 200 DDAL--HVIDGGVCET--------DDARRASDHLPIWLDF 229


>gi|329964785|ref|ZP_08301808.1| exodeoxyribonuclease III [Bacteroides fluxus YIT 12057]
 gi|328524636|gb|EGF51699.1| exodeoxyribonuclease III [Bacteroides fluxus YIT 12057]
          Length = 254

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 87/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N+N L                 +    L ++      D++ LQE  +      A
Sbjct: 1   MKIITYNVNGLRA---------------AVTKGLPEWLAQEQPDVLCLQETKLQPEQYPA 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +  +  + +   +          + +A+  +        +   G         
Sbjct: 46  DALDSLGYRHYLYSAQKKGY----------SGVAILTRREP----DHVEYGMGIEEYDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++  S    D  +       +      +  ++++ + + +
Sbjct: 92  GRF-----IRADYGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEKFQEYVLELQRT 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247
               ++ GD+N     +  +D                W T   N   I   +        
Sbjct: 140 RPKLILCGDYNICHEPIDIHDPIRNATNSGFLPEEREWMTRFLNAGFIDSFRLLHPDKQE 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY ++ +     L +                G   SDHCP+
Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMVSEPVRPMLKEAQIL-----------NGAVHSDHCPM 248

Query: 299 SIDYD 303
           S++  
Sbjct: 249 SLEIT 253


>gi|297739882|emb|CBI30064.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 84/312 (26%), Gaps = 68/312 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P     A+ V+L+SWN+N L        +         D+            D++ LQE 
Sbjct: 273 PPLTGDAKFVKLMSWNVNGLRGLLKSKGFSALKLAQREDF------------DVLSLQET 320

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +   ++    + ++           +   ++  A+  +   +  +    +   
Sbjct: 321 KLQEKDVEAIKQSVIEGYENSFWT-----CSVSKLGYSGTAIISRIKPLSVRYGLGISDH 375

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           DS  R          +    +  ++L  ++ +               S    Q       
Sbjct: 376 DSEGRL---------LTAEFESFYLLSGYVPN-------SGDGLKRLSYRVTQWDSALGS 419

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPK 239
             ++ E   P ++ GD N     +  +D                           +   +
Sbjct: 420 YMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTDEERQSLEKNFLSKGFVDSFR 479

Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           ++            +           +DYF++ ++    +            D       
Sbjct: 480 KQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSESIADKVH-----------DSYILPDI 528

Query: 291 RLSDHCPISIDY 302
             SDHCPI +  
Sbjct: 529 GGSDHCPIGLVL 540


>gi|225441351|ref|XP_002274714.1| PREDICTED: similar to apurinic endonuclease-redox protein [Vitis
           vinifera]
          Length = 490

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 84/312 (26%), Gaps = 68/312 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P     A+ V+L+SWN+N L        +         D+            D++ LQE 
Sbjct: 221 PPLTGDAKFVKLMSWNVNGLRGLLKSKGFSALKLAQREDF------------DVLSLQET 268

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +   ++    + ++           +   ++  A+  +   +  +    +   
Sbjct: 269 KLQEKDVEAIKQSVIEGYENSFWT-----CSVSKLGYSGTAIISRIKPLSVRYGLGISDH 323

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           DS  R          +    +  ++L  ++ +               S    Q       
Sbjct: 324 DSEGRL---------LTAEFESFYLLSGYVPN-------SGDGLKRLSYRVTQWDSALGS 367

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPK 239
             ++ E   P ++ GD N     +  +D                           +   +
Sbjct: 368 YMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTDEERQSLEKNFLSKGFVDSFR 427

Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           ++            +           +DYF++ ++    +            D       
Sbjct: 428 KQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSESIADKVH-----------DSYILPDI 476

Query: 291 RLSDHCPISIDY 302
             SDHCPI +  
Sbjct: 477 GGSDHCPIGLVL 488


>gi|281424726|ref|ZP_06255639.1| AP endonuclease domain protein [Prevotella oris F0302]
 gi|281401096|gb|EFB31927.1| AP endonuclease domain protein [Prevotella oris F0302]
          Length = 363

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 87/303 (28%), Gaps = 70/303 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+ + +  E  +  K            + +Y +   ADI+ LQE  +     
Sbjct: 99  DAIKVMSYNVWSFAGWERHADGKFP----------ILEYIREQQADILCLQEAMTNEIGQ 148

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                    I+   + +         +     IA+  +   V  +        +      
Sbjct: 149 ARVDSVLNKIYAYKDTMK-------FSPSSDCIALYSRYPIVSHERIVYPSRGNLSG--- 198

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
                   ++I    + V++ HL++    +  +  +                        
Sbjct: 199 -----AFEIKIGNDTVIVVNNHLETTGLSNEDKREFKSMVKGNLLTSDAKQASYRLIDKL 253

Query: 179 -PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             + +  + QA  +  +I++   S    ++ GDFN        +               F
Sbjct: 254 GEASAKRAVQADAVARYISKH--SDRSMIVCGDFNDSPISYARHTI------AKGLTDCF 305

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +    +  N    + ID+ +  ++         +       D         SDH P
Sbjct: 306 IATGNGLGVSYHNGGMYVRIDHIMCSKD---------WQPYGCKVDRSIGE----SDHYP 352

Query: 298 ISI 300
           I  
Sbjct: 353 ILC 355


>gi|255034710|ref|YP_003085331.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
 gi|254947466|gb|ACT92166.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
          Length = 261

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 83/302 (27%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                    +L ++ +    D+V LQE+ +       
Sbjct: 1   MKIATYNINGVNG----------------RLPVLLKWLEEAKPDVVCLQELKAPQD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++       +   +A+  K++ + +    L G     S   +R
Sbjct: 41  ------KFPERALLDAGYNSIWHGQKMWNGVAILSKDLPIQEVRNSLPGD---DSDLHSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++      ++ V  ++L +       +  Y  +        + LK          V
Sbjct: 92  YIEAIV-----GRMLVCCLYLPNGNPAPGPKFDYKMA------WFKRLKKHAKYLLSEEV 140

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N                           +K +     +              
Sbjct: 141 PVVLAGDYNVIPKEKDVYKPERWVDNALFFPEPRKAYKELVGQGWIDSIRHLHPDETIYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+ ++       L+           D      ++ SDH P  I
Sbjct: 201 FWDYLRNAYGRNAGLRLDHLLLSPQIAPRLVAAGV-------DKHVRGWEKSSDHAPTWI 253

Query: 301 DY 302
             
Sbjct: 254 IL 255


>gi|254509579|ref|ZP_05121646.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221533290|gb|EEE36278.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 236

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 82/284 (28%), Gaps = 55/284 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + +  +RL S+NI      +                  + Q  ++L ADIV LQE     
Sbjct: 4   TQSSTLRLASYNIQKCVGLD-----------LRRQPQRILQVIESLQADIVVLQEADKR- 51

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              +      + +  +  ++++     S      A+  R   + V Q  +  L       
Sbjct: 52  LPPRPAALPHFMLDEAGWQIVDLGGAGSLGWHGNAVIWRGDAIEVRQTGHHDLPG----- 106

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R AV +  +     + V+ +HL                 +   +Q   ++      
Sbjct: 107 -LEPRGAVRVEFDTQIGPLRVMGMHLGLLS-------------ASRRRQITHIRH--CDS 150

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             + +P V AGDFN       +       + P+   +           +    +    +D
Sbjct: 151 DLADMPTVWAGDFN-----EWSRQPVLDHLAPDMRFL-------PPVPSFPAAQPLGALD 198

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + Q     L                      SDH P+  D 
Sbjct: 199 RIAVGQGLEAALHGV----------HNARPAHIASDHLPVWADL 232


>gi|222098525|ref|YP_002532583.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus Q1]
 gi|221242584|gb|ACM15294.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus Q1]
          Length = 327

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 109/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 25  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 84

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N      +       S   + +                  ++  
Sbjct: 85  LQEVDIKSM--RSFDVNGHEFLKNGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 142

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + + NGK + ++++HL +        
Sbjct: 143 SKYKVQTAERFQLPGMEPWPKRLFDLDRAIVEHKIPVSNGKFVRLVNLHLSA-------- 194

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P   +
Sbjct: 195 --YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 252

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 253 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 310

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 311 KFEN----------SDHNPVSAVF 324


>gi|260788626|ref|XP_002589350.1| hypothetical protein BRAFLDRAFT_217983 [Branchiostoma floridae]
 gi|229274527|gb|EEN45361.1| hypothetical protein BRAFLDRAFT_217983 [Branchiostoma floridae]
          Length = 372

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 73/271 (26%), Gaps = 29/271 (10%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDS 106
            + +  + +   +   D+V LQE+ S +   K+         +  ++     +++     
Sbjct: 8   PARFQAIGEELCSGRYDLVSLQEVWSQDVYEKLVYQVQDVLPYHHYFYRHVKLSNVLHGW 67

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           +    + + V  +   +    +                 G +      V   G +I +  
Sbjct: 68  HG---SGLCVFSRYPIIGSHQHRFTLNGFPHTPHHPDWYGGKMVGLCQVRHPGAEINIYV 124

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI------ 215
            H           +      +    QA  L  +I    +S    ++AGD N +       
Sbjct: 125 THTH-----TEYNHENDKDKAHRVLQAFELSQFIRHTGQSADVNILAGDLNNQPFELGLK 179

Query: 216 ---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
              +  G +D +      N          D               DY +   +A   +  
Sbjct: 180 IIESNTGMDDGWLTAEHKNAEDSGLTWNLDDNNYTCYPDYPPCRYDYVLYKGSARCRVRC 239

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 ++            SDH  +    +
Sbjct: 240 VHCETTMHKVPGKP---FNYSDHEGVVAHLE 267


>gi|85375221|ref|YP_459283.1| exonuclease III [Erythrobacter litoralis HTCC2594]
 gi|84788304|gb|ABC64486.1| exonuclease III [Erythrobacter litoralis HTCC2594]
          Length = 265

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 75/307 (24%), Gaps = 69/307 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V + +WNIN                       ++ ++      D++ LQE+         
Sbjct: 2   VSVTTWNIN----------------SVRLRMPIVERFIDQEAPDVLCLQEIKCQE----- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   + +  +L            +  +A   K        +      D       R
Sbjct: 41  ----HQFPYEAFRKLGYEHFAVHGQKGYHGVATVGKVPFTEFSRH------DWQDNGEAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                L E   K   + ++++ +   +               Q+  +L+       +   
Sbjct: 91  HVGIELTEGPAKGTVIENVYVPAGGDIPD-----REQNLKFGQKLDFLERMTRWADKVDR 145

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
           P +I GDFN         +                   + +D +       +   +    
Sbjct: 146 PTLIVGDFNIAPLESDVWNHKQLLKVVSHTPVEVETLQRFMDAHGWSDIGREHIRAPERY 205

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+                        +     ++ SDH P
Sbjct: 206 YSWWSYRSPDWRKNDRGRRLDHMWASPELAAQATGHRL-------LEDARSWEKPSDHIP 258

Query: 298 ISIDYDF 304
           ++ ++ F
Sbjct: 259 LTTEFTF 265


>gi|282859591|ref|ZP_06268695.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
 gi|282587642|gb|EFB92843.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
          Length = 326

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/327 (10%), Positives = 85/327 (25%), Gaps = 50/327 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAK 62
            P       +  +V  N   + +    +L  +           S  +       + +   
Sbjct: 13  FPLGGIAQTRFTIVELNTENMFDVRHDTLKHDEEFLPDGLRHWSKAKYWEKLNNIGKTIL 72

Query: 63  NLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           +           D+V L E+ +   +  +  ++        +    +    S ++    +
Sbjct: 73  SCGKDSTRWSVPDVVGLCEVENDTVLFDLTKRS-----LLRKARYEYVMTQSADERGIDV 127

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSL 173
           A+              +           R  + ++ EI     + V  +H  S    +  
Sbjct: 128 ALLYSPFSFRLLKADTIRIIPMKGMKPTRDILHVMGEIPSSDTLHVFLVHAPSRSGGELQ 187

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPN 231
              Y          A+ L   I   K   V    +I GDFN   +       +   +   
Sbjct: 188 TRPY------RLHIAKQLACSIDSIKAIDVHAKMLIMGDFNDYSDSPSLQKLYVHNMLDV 241

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY----------- 280
            +  +      +     +       +D+ ++  N    +     ++  +           
Sbjct: 242 SANAQGTHGAKA---TYRYQGEWGSLDHILVSGNLLSNVKDCYINDAPFLLEPDTKYGGV 298

Query: 281 ---NEDDIKSRGKRLSDHCPISIDYDF 304
                 +        SDH P+ +   F
Sbjct: 299 KPRRNYNGMRYNHGFSDHLPLVLKLVF 325


>gi|256962167|ref|ZP_05566338.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Merz96]
 gi|293383194|ref|ZP_06629110.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis R712]
 gi|293387652|ref|ZP_06632198.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis S613]
 gi|312907219|ref|ZP_07766210.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 512]
 gi|312909837|ref|ZP_07768685.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 516]
 gi|256952663|gb|EEU69295.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Merz96]
 gi|291079372|gb|EFE16736.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis R712]
 gi|291082984|gb|EFE19947.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis S613]
 gi|310626247|gb|EFQ09530.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 512]
 gi|311289795|gb|EFQ68351.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 516]
          Length = 254

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKVATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ ++ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKIQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           Q      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 QY-----PTLLMGDFNAE-SEEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|167748893|ref|ZP_02421020.1| hypothetical protein ANACAC_03667 [Anaerostipes caccae DSM 14662]
 gi|317470265|ref|ZP_07929659.1| exodeoxyribonuclease III [Anaerostipes sp. 3_2_56FAA]
 gi|167651863|gb|EDR95992.1| hypothetical protein ANACAC_03667 [Anaerostipes caccae DSM 14662]
 gi|316902238|gb|EFV24158.1| exodeoxyribonuclease III [Anaerostipes sp. 3_2_56FAA]
          Length = 251

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 79/302 (26%), Gaps = 78/302 (25%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           LVSWN+N L                           + LDADI  +QE         +  
Sbjct: 4   LVSWNVNGLRACVKKGF---------------LDVMEQLDADIFCIQETKLQEGQIDLEL 48

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            + +  +             +    ++  AV  K   +  ++   +   D   R      
Sbjct: 49  PDYYQYW-----------NYAEKKGYSGTAVFTKIKPLSVKNGIGVDEFDHEGR------ 91

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +     +++  +  +     +  +          +    L++          P 
Sbjct: 92  ---VITLEFDDYFLVTCYTPNSQSELARLSYRMDWEENFREYLLKLEE--------DKPV 140

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           ++ GD N                         + +  +     +  F         A   
Sbjct: 141 ILCGDLNVAHTEIDLKNPKTNRKNAGFTDEEREKFTKLLEAGFIDTFRHFYPDVTEAYSW 200

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           IDYF + +   + L +      +Y            SDHCP+ + 
Sbjct: 201 WSYRFRAREKNAGWRIDYFCVSEGLEERLAEAVIHTDIY-----------GSDHCPVGLY 249

Query: 302 YD 303
            +
Sbjct: 250 LE 251


>gi|73976313|ref|XP_539516.2| PREDICTED: hypothetical protein XP_539516 isoform 2 [Canis
           familiaris]
          Length = 564

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 77/295 (26%), Gaps = 38/295 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNVQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNVRVLQQSYPLL 131
             +    I  +  +                                  +   +  +    
Sbjct: 312 CTELNQPILPNIRKWKGPRGCWKAVVAEMPSTQLQKPPPLAGFPYLWPHGSSVVTAAESS 371

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                               +    + ++++HL +         + + S S         
Sbjct: 372 PGSGHSPCCRP----SARFPVGSNDLTLVNLHLATLVHPGGENPSRNHSDSHR---LASF 424

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              + +  +     ++ GDF +  +    +      +         P    +   + KN 
Sbjct: 425 VQTLQETLKGEKDMIVLGDFGQGPDSSDYD-----ILRKEKFYHLVPAHTFTNI-STKNP 478

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
           +    +D   + ++  K                 I          S+HCP+  ++
Sbjct: 479 QGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 533


>gi|50119211|ref|YP_048378.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49609737|emb|CAG73171.1| endonuclease/Exonuclease/phosphatase family protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 392

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 86/275 (31%), Gaps = 27/275 (9%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           ++       +    L+ADI+   E+ + + +     +      +S   +I+         
Sbjct: 122 SSQQRKNTGKIINLLNADILCAVEVENMDVLRDFNSQVLGKKKFSQFVMIDSPN--DPRG 179

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           I  A   R + V++      +  A   F    +R  +E+ ++   K+  +  +       
Sbjct: 180 IDVACLTRYRIVQL---RTHIFDAGKQFDPVFSRDCLEVTLDAGLKQ-PIYILCNHFKSQ 235

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228
               E            Q++ + + + Q  +      VI GD N   +    +     ++
Sbjct: 236 SGQTEQERQRGAQKRRDQSERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWQSLAPLFSL 295

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEI------ 278
                +I   + +  R     +   K      +DY  +    ++ +++            
Sbjct: 296 SDLHPVIDPERPEKERYTYYFSGGKKGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNID 355

Query: 279 ----------LYNEDDIKSRGKRLSDHCPISIDYD 303
                     +    ++ S     SDH  + ++ D
Sbjct: 356 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 390


>gi|117919422|ref|YP_868614.1| endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3]
 gi|117611754|gb|ABK47208.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3]
          Length = 377

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/367 (10%), Positives = 85/367 (23%), Gaps = 78/367 (21%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIV 69
           L   T S    +++ + N+    E            S  +         +       DIV
Sbjct: 8   LSSLTESTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLNQHHPDIV 67

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQ 126
             QE+ S   + ++         ++                  A+A R   + V     +
Sbjct: 68  GFQEVFSPEPLRQLA-LQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPE 126

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFL--------------- 170
           +  +     S   + +R+ +   V +          +H KS                   
Sbjct: 127 ANLVAAMGLSSEFSFSRKVLRATVAVPQIGPCDCYVVHFKSKRAGLALEPHPLGLSLNAP 186

Query: 171 ------------DSLENTYSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRK--- 214
                                S      +A  L    + +++ +  P ++ GDFN     
Sbjct: 187 SDLKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDFNDSLSL 246

Query: 215 ------------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------------- 246
                       ++           +        F   +                     
Sbjct: 247 GALDALTLQGEALHSNDIKAAGLGHLSDAALAQVFGHYRLQDAYELFIEANVVDNAVHYR 306

Query: 247 -----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDH 295
                 +        +DY ++         +     + Y   D         R    +DH
Sbjct: 307 EHRAPTHYYGPKGSVLDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDH 366

Query: 296 CPISIDY 302
            P+ ++ 
Sbjct: 367 APVMVEL 373


>gi|326390442|ref|ZP_08212000.1| exodeoxyribonuclease III Xth [Thermoanaerobacter ethanolicus JW
           200]
 gi|325993560|gb|EGD51994.1| exodeoxyribonuclease III Xth [Thermoanaerobacter ethanolicus JW
           200]
          Length = 257

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 86/307 (28%), Gaps = 81/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80
           ++ VSWN+N L                         Y K ++ADI  +QE         +
Sbjct: 1   MKFVSWNVNGLRACLQKGFM---------------DYFKKVNADIFCIQETKLQPHQTGL 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++  +  +  +             +    ++  AV  K   +       +   D+  R 
Sbjct: 46  EELNLEGYYAFW-----------NFAEKKAYSGTAVFTKYKPLSVNYGIGIPQHDNEGR- 93

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   ++ +  +K ++++ +  +     +  +               L        +
Sbjct: 94  --------VITLEYEKFYLVNTYTPNSQRGLTRLSYRMEWEEDFRNYLLKL--------D 137

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           S+ P ++ GD N                         +    +  +  +  F      + 
Sbjct: 138 SVKPIILCGDLNVAHKEIDIKNPSANRRNAGFTDEEREKMTMLLNSGFIDTFRYFYPHKK 197

Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +A                  IDYF++ Q    +LI                     SDHC
Sbjct: 198 DAYTWWSYMRNAREKNIGWRIDYFIVSQRLKDYLIDAEIH-----------SDVMGSDHC 246

Query: 297 PISIDYD 303
           P+ ++ D
Sbjct: 247 PVVLEID 253


>gi|126433840|ref|YP_001069531.1| exodeoxyribonuclease III Xth [Mycobacterium sp. JLS]
 gi|126233640|gb|ABN97040.1| exodeoxyribonuclease III Xth [Mycobacterium sp. JLS]
          Length = 263

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/281 (11%), Positives = 74/281 (26%), Gaps = 57/281 (20%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
            +R+T +  LL  + K   AD+V LQE  + +              +       H     
Sbjct: 16  KQRSTENLGLLA-WLKETSADVVCLQETRADDDQLADALAPALADGWHLASASPH----- 69

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  +AV  ++     +        D              +E++   + V  +++++
Sbjct: 70  -LKGRNGVAVLSRHAVTEHRRMESEEFGDHGRY----------LEVDTGGLTVASVYVQT 118

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--- 223
                  +       + L+ +   ++             V+ GD+N         +    
Sbjct: 119 GEAETDRQLEKERFMAALATRMAEIR---------GTDAVVCGDWNIAHTENDIKNWKGN 169

Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                       +   +     +                   +           IDY + 
Sbjct: 170 VKKSGFLPSERQWLTDLLGTGWVDVVRALHPDVAGPYSWWSWRGRAFDNDAGWRIDYQLA 229

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +             +   +   +   R SDH P++++Y 
Sbjct: 230 SPSLAPRA-------HIARVERADAYALRWSDHAPVTVEYS 263


>gi|260903873|ref|ZP_05912195.1| hypothetical protein BlinB_00970 [Brevibacterium linens BL2]
          Length = 255

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/283 (11%), Positives = 79/283 (27%), Gaps = 37/283 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              ++++N+   +                +   +  +        I+  QE         
Sbjct: 3   DFSIMTFNLRYPALDGHP---------VATRLPIAAELITQARPHIIGTQEGELDQLENL 53

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +       ++        +S   +     ++     +         P   A +S+  +  
Sbjct: 54  ISLLPKEYVWLGEGHSGGNSGEFTAVIYDSSRFDVDRVDISWLSEQPETVASESWGVSHA 113

Query: 143 RRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           R    +     +  + + +L+ HL               S     +  + + D + +   
Sbjct: 114 RTLTVVDFRDLVTKQPLRLLNTHLDH------------RSEEARLESGKIMADHLAEAAG 161

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
              P V+ GDFN         + F   +   D+    P E     +  K  ++    ID+
Sbjct: 162 ---PCVVTGDFNVATGS-PVYNYFCTELGLTDTGAAVPGENIGTFHRYKGPKDGDPRIDW 217

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +   +            +    +   + G+  SDH P+    
Sbjct: 218 ILTTSDL---------QTVSTRINTFSAGGEYPSDHFPVEAVL 251


>gi|313897464|ref|ZP_07831007.1| exodeoxyribonuclease III [Clostridium sp. HGF2]
 gi|312957834|gb|EFR39459.1| exodeoxyribonuclease III [Clostridium sp. HGF2]
          Length = 254

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 82/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RLVSWN+N +                         + K +DAD+  +QE        ++
Sbjct: 1   MRLVSWNVNGIRACMQKGFM---------------DFFKEIDADVFCIQETKMQPGQLEI 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    S E              ++   V  K   +       +   D   R    
Sbjct: 46  ETPGYYQYMNSAE-----------KKGYSGTMVFSKQKPLSVTYGLGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  +++ ++  +                         + ++  K     
Sbjct: 91  -----VITCEYEDFYLVCVYTPN-------SKDGLLRLDYRMVWEDAFRAYL-HKLNETK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                              +  +  +  F      +    
Sbjct: 138 SVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKMSVLLESGFIDSFRYLYPKQEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++A + + +      +Y            SDHCP+S
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFLVSEDAKEAIREARIHTDIY-----------GSDHCPVS 246

Query: 300 IDYD 303
           +++D
Sbjct: 247 LEFD 250


>gi|301095832|ref|XP_002897015.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262108444|gb|EEY66496.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 490

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 90/299 (30%), Gaps = 41/299 (13%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWNI  +S ++ + L              +    K    DIV LQE+     + ++  
Sbjct: 193 VASWNIRNISRRKEIFL-----------LERIADILKEF--DIVALQEVRDLIVLKRLKT 239

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                 +  +E +   S          A   R+   R++++ + + G+ D F+R      
Sbjct: 240 MLPGWDYVVSEPVGRMSPGAKKRVERYAFFYRRSAARLVEKCWLVEGSSDVFTRLPCVAT 299

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                E     + +  I++        +      S      +   L + ++         
Sbjct: 300 FRATKESGVTGLELALINVH-------VSFAEKESRHAEIAEISRLANELSASVPINRKV 352

Query: 206 VIAGDFNRKI----------NYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCN----ANKN 250
           V+ GDFN                        T+           +   S CN        
Sbjct: 353 VVLGDFNLSPQDVLGSLGSHKMALIRSPLSTTVFGKLYDNIWLDRADFSNCNIDKPTYCV 412

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------GKRLSDHCPISIDYD 303
               + +D+     +      + +   +      +++       G  LSDHCP+ + + 
Sbjct: 413 DSGVLRVDWRFYPPSKGTCSRRSAQHPMDTMLPRLQTYMSRVQCGYELSDHCPVWVAFT 471


>gi|237733965|ref|ZP_04564446.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229383046|gb|EEO33137.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 251

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 79/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N +        +                  K   ADI  +QE        ++
Sbjct: 1   MKLVSWNVNGIRACITKGFY---------------DVLKESKADIFCVQETKMQEGQIEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    S E              ++   V  K   +       +   D   R    
Sbjct: 46  EKHGYYTYMNSAE-----------KKGYSGTLVFSKEKPLNYSYGIGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V +  +K ++++ +  +                      +    ++   ++S  
Sbjct: 91  -----VVTLEYEKFYLVNCYTPN-------SQNELKRLDYRMHWEEDFLAYLKSLEKSK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                              +  N  +  +      +    
Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTNLLENGFIDTYRYLYPDQEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++     + + +      +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFICTDIL-----------GSDHCPVG 246

Query: 300 IDYD 303
           ++ D
Sbjct: 247 LEID 250


>gi|28493411|ref|NP_787572.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist]
 gi|28476452|gb|AAO44541.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist]
          Length = 285

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 72/305 (23%), Gaps = 61/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+ +WN+N                   +    +  + KN   D+  LQE          
Sbjct: 7   VRVGTWNVN----------------SIRARLERVLAWLKNECIDVAALQETKVRTG---- 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +            +A+  +                   R G  
Sbjct: 47  ------DFPVDAFRDAGYYSEAHGLRGFEGVAIVSRFPIRRVTVNIPRAPGFLSDRWGTD 100

Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-- 200
              E   +      I +  +++ +   + S    Y  +        + L   +       
Sbjct: 101 IPQEARAISATTGGIRLYSLYVPNGREVGSPHFEYKLA------WLKALASHVRTVLRRT 154

Query: 201 SLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             +P ++ GDFN                  I   G   + ++ I                
Sbjct: 155 PGIPLMLVGDFNIVTCEQDTADPDFQLPNDITCSGPEREAFQAILDTGMFDLIRPFAPIG 214

Query: 245 CNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
             +    R +        ID+ +   +  +  I                 G   SDH P+
Sbjct: 215 FTSWSYQRQRFQNNQGLRIDFMLGSDSVQRRTIWGEID----RVQRRHLFGLTPSDHAPL 270

Query: 299 SIDYD 303
               D
Sbjct: 271 VSVID 275


>gi|967268|gb|AAC47024.1| class II apurinic/apyrimidinic(AP)-endonuclease [Dictyostelium
           discoideum]
          Length = 361

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/309 (10%), Positives = 81/309 (26%), Gaps = 77/309 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAV 80
            +++++SWN+                           +  +  + D++ LQE   + + +
Sbjct: 103 NQMKIISWNVAGFKSVLSKGF---------------TECVEKENPDVLCLQETKINPSNI 147

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K      +   +       H          T +  +KK   +        G   +    
Sbjct: 148 KKDQMPKGYEYHFIEADQKGHHG--------TGVLTKKKPNAIT------FGIGIAKHDN 193

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     ++ +   + ++++ ++ +          Y      +  QA        +K  
Sbjct: 194 EGR-----VITLEYVQFYIVNTYIPNAGTRGLQRLDYRIKEWDVDFQA------YLEKLN 242

Query: 201 SLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +  P +  GD N     +                     +        +  +      + 
Sbjct: 243 ATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERTSFSNFLEKGYVDSYRHFNPGKE 302

Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            +                  +DYFV+ +     +    F                 SDHC
Sbjct: 303 GSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMDSIKISPFH----------RTSVMGSDHC 352

Query: 297 P--ISIDYD 303
           P  + +D +
Sbjct: 353 PIGVVVDLN 361


>gi|332662210|ref|YP_004444998.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332331024|gb|AEE48125.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 286

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 70/296 (23%), Gaps = 44/296 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           AQ +  +++NI   + Q+G +       +       L         DI  +QE       
Sbjct: 23  AQSLVTMTFNIRYNTTQDGEN-------QWQKRKENLASMLPFYGVDICGMQEALVGQIK 75

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-----AKD 135
             +  +  +                S       I   K    VL  +   L         
Sbjct: 76  DVISAQPQYAYLGVGRDDGQEKGEFSP------ILYLKDKFEVLSSATFWLSETPNVPSK 129

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            +    NR       +    K      +          +     S  LL Q+ + +    
Sbjct: 130 GWDANLNRIVTWAKFKDKKSKKVFYFFNTHY---DHIGKVARRESSKLLLQKVKEIA--- 183

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253
                   P +I GDFN   +         +  +P+  +                     
Sbjct: 184 -----GTTPAIITGDFNAVPSDEPI-TVLVEANNPDKLIDTEGLSLSPHFGPYSTFNGFT 237

Query: 254 -----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   IDY  +               + +        G+  SDH  +     +
Sbjct: 238 VMEQEGRHIDYIFIKN-------PGKLKVLKHATLTNTWAGRFASDHHAVLAVLGW 286


>gi|327313318|ref|YP_004328755.1| exodeoxyribonuclease III [Prevotella denticola F0289]
 gi|326944960|gb|AEA20845.1| exodeoxyribonuclease III [Prevotella denticola F0289]
          Length = 249

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 83/302 (27%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G                   Q  K+LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRACVGKEFE---------------QQFKDLDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  K+  +       +   D   R    
Sbjct: 45  LSFPGYESYWN----------YADKKGYSGTAIFTKHKPLNVTYGIGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                   +     + ++  K +   
Sbjct: 91  -----VITLEMDDFYLVTVYTPN-------SQDGLRRLDYRMKWEDDFQAYL-HKLDEKK 137

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+ GD N                         +   + +             +    +
Sbjct: 138 PVVVCGDMNVAHQEIDLKNPKTNRKNAGFTDEEREKMTQLLGNGFIDTFRTLYPEQVTYS 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R +         IDYF++ +     L        +             SDHCP+ +
Sbjct: 198 WWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIHTEI-----------MGSDHCPVEV 246

Query: 301 DY 302
           D 
Sbjct: 247 DL 248


>gi|237730766|ref|ZP_04561247.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906305|gb|EEH92223.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 253

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 81/284 (28%), Gaps = 50/284 (17%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---- 83
           S+N+ T++  +G + +             LR+  + + ADIV LQE+   +    +    
Sbjct: 9   SFNVLTINTHKGFTAFNRRF-----ILPELREAVRTVGADIVCLQEVMGAHEAHSLHIEN 63

Query: 84  FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +P  +   F +     +  + +       H   AV  +                S   + 
Sbjct: 64  WPDTSHYEFLADTMWSDFAYGRNAVYPQGHHGNAVLSRYPIE-----HYENRDVSVGASE 118

Query: 142 NRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R  +   +        I V+ +HL                 +    Q   L DW+    
Sbjct: 119 KRGVLYCRIVPPMLSHPIHVMCVHLGLR-------------EAHRQAQLAMLADWVNA-L 164

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKIPID 258
               P VIAGDFN             + +     L   F +               + +D
Sbjct: 165 PDAEPVVIAGDFNDW------RQTANRPLKAKAGLDEIFTRAHGRPARTFPVQFPLLRLD 218

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +                           + LSDH P+S + 
Sbjct: 219 RIYVKNANAS-----------TPTTLALRHWRHLSDHAPLSAEI 251


>gi|108798182|ref|YP_638379.1| exodeoxyribonuclease III (xth) [Mycobacterium sp. MCS]
 gi|119867278|ref|YP_937230.1| exodeoxyribonuclease III Xth [Mycobacterium sp. KMS]
 gi|108768601|gb|ABG07323.1| exodeoxyribonuclease III (xth) [Mycobacterium sp. MCS]
 gi|119693367|gb|ABL90440.1| exodeoxyribonuclease III Xth [Mycobacterium sp. KMS]
          Length = 263

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/281 (10%), Positives = 74/281 (26%), Gaps = 57/281 (20%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
            +R+T +  LL  + K   AD+V LQE  + +              +       H     
Sbjct: 16  KQRSTENLGLLA-WLKETSADVVCLQETRADDDQLADALAPALADGWHLASASPH----- 69

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  +AV  ++     +        +              +E++   + V  +++++
Sbjct: 70  -LKGRNGVAVLSRHAVTEHRRMESEEFGEHGRY----------LEVDTGGLTVASVYVQT 118

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--- 223
                  +       + L+ +   ++             V+ GD+N         +    
Sbjct: 119 GEAETDRQLEKERFMAALAMRMAEIR---------GTDAVVCGDWNIAHTENDIKNWKGN 169

Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                       +   +     +                   +           IDY + 
Sbjct: 170 VKKSGFLPSERQWLTDLLGTGWVDVVRALHPDVAGPYSWWSWRGRAFDNDAGWRIDYQLA 229

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +             +   +   +   R SDH P++++Y 
Sbjct: 230 SPSLAPRA-------HIARVERADAYALRWSDHAPVTVEYS 263


>gi|82701739|ref|YP_411305.1| endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC
           25196]
 gi|82409804|gb|ABB73913.1| Endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC
           25196]
          Length = 250

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 86/281 (30%), Gaps = 48/281 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSY 77
            K+ + ++NI+                        LR   + L+ADI+FLQE+      +
Sbjct: 3   NKLHIATYNIHKGFSHFN----------RRVMVHQLRDSLRALNADIIFLQEVVGEHKGH 52

Query: 78  NAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            A  + +P++    F +        + K    ++ H   A+  +   +   +  +     
Sbjct: 53  GARFENWPESPQYEFLADSIWTDFAYGKNAVYDEGHHGNAILSRYPILRWDNVDVSA--- 109

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              R  +R  +   + I   +  +  I +    F               S+Q Q L+  I
Sbjct: 110 --HRFESRGLLHCEIGIPQWRENLHCICVHLGLFK-----------RGRSRQLQLLEKHI 156

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            +      P VIAGDFN             + +   +      + + +R   +       
Sbjct: 157 EELVPQDAPLVIAGDFNDWREVAS--RILVQRLALAEVFEL-TEGRPARTYPSTLPLF-- 211

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            +D   +     +                      ++SDH 
Sbjct: 212 RLDRIYVRGFHIEKAQVHQGH-----------PWSKISDHA 241


>gi|297589938|ref|ZP_06948578.1| Sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus MN8]
 gi|297577066|gb|EFH95780.1| Sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus MN8]
          Length = 280

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 75/256 (29%), Gaps = 26/256 (10%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAV 116
           + D+V   E     A  K+         Y T                  S       +A+
Sbjct: 28  NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAI 87

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K     +  +        F    N+  V   +E NGK + V+  H +S    DS    
Sbjct: 88  VSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGA 143

Query: 177 YSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                 + ++Q + + D++ +          I GD N          D  K ++ ND L 
Sbjct: 144 GH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN-KGTEEFKDMLKNLNVNDVLY 201

Query: 236 RFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSR 288
                            N        +DY   D++  +   L+ E  +E     D     
Sbjct: 202 AGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFP 261

Query: 289 GKRL----SDHCPISI 300
              +    SDH PI  
Sbjct: 262 YYYVYNDFSDHYPIKA 277


>gi|47567314|ref|ZP_00238027.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Bacillus cereus G9241]
 gi|47555935|gb|EAL14273.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Bacillus cereus G9241]
          Length = 327

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 105/322 (32%), Gaps = 64/322 (19%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + ++ ++NI               G     +S ++T  +   +  + +N  +D   LQ
Sbjct: 27  GNEFKVTTFNIGYGGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNEKSDFALLQ 86

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKK 119
           E+   +   + F  N              S   + +                  ++   K
Sbjct: 87  EVDIKSM--RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTFSK 144

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 145 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 194

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK+++ +  ++    ++ GD+N+ ++    +D  +    P   +  
Sbjct: 195 YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLVEL 254

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 255 PKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 312

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 313 EN----------SDHNPVSAVF 324


>gi|317492832|ref|ZP_07951256.1| endonuclease/Exonuclease/phosphatase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918954|gb|EFV40289.1| endonuclease/Exonuclease/phosphatase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 295

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 95/326 (29%), Gaps = 66/326 (20%)

Query: 1   MIRKYVLALVFFLVPC--------------------TASVAQKVRLVSWNINTLSEQEGV 40
           +++K +L L+ F+V                      + S A ++ + ++N+         
Sbjct: 3   LMKKIILGLIPFVVFAAHADTKVLTPEKNGTPNKIYSESQAPQLTIANYNM--------- 53

Query: 41  SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100
                      SD + L +  K ++ADI+ L E+      +    +       +      
Sbjct: 54  ------AAARVSDLSTLAKAIKAMNADIISLNEVDKNTQRSGKVDQVAELAKLTGM-HAA 106

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
             K          +A+  K     QQ +PL            R  +   +++      ++
Sbjct: 107 FGKAIDFEGGEYGVALLSKYPIDKQQVFPLPSG-----DGEQRVLLVTQIQVPHFDSPII 161

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV------IAGDFNRK 214
            +              +    ++  QQ + +++      +S    +      +AGDFN  
Sbjct: 162 MMSTHL---------DWQEDPTIRLQQIREIENVTIGNTDSSFNNIASSIKLLAGDFNDT 212

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
            N     +                +  D R     N      +D+    +     +  E 
Sbjct: 213 YNGPAIREL------ERYWNPLVVEGADMRTWPAANPALD--LDHLFAFRGQQWKI--EE 262

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISI 300
            +      +         SDH P+ +
Sbjct: 263 LTVPNKKAEWKAVNWPVASDHIPVIV 288


>gi|38073480|gb|AAR10849.1| MP100 [Trypanosoma cruzi]
          Length = 925

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 82/297 (27%), Gaps = 39/297 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            ++L++WN+         +          +   Y +L +  +  DAD+V +QE+      
Sbjct: 647 TLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVLARVIQQEDADVVGMQEVE----- 701

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +  F S +  +  +   S      +I+     + V ++ +P+         A
Sbjct: 702 ------PVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPA 755

Query: 141 GNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                     + +++    + V   HL +           S   +L     + L      
Sbjct: 756 WTNHVSLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTL------ 809

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----- 252
                   V  GDFN             + +     LI     ++   +           
Sbjct: 810 ----TGDVVTMGDFNDWPTNEFLMPAESQYV-DCWPLIYHTMLENDGRDEYILQTECKLK 864

Query: 253 ----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPISIDY 302
                    D   +       +          N+++           SDH  +S+ +
Sbjct: 865 VEEMFFGRSDKLFLRSRRLAPVEGHLVGTKSVNDENGNKEAPGYLFPSDHYGVSMTF 921


>gi|229546085|ref|ZP_04434810.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1322]
 gi|256852883|ref|ZP_05558253.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|257085499|ref|ZP_05579860.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Fly1]
 gi|307288462|ref|ZP_07568448.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0109]
 gi|307291220|ref|ZP_07571105.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0411]
 gi|229308781|gb|EEN74768.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1322]
 gi|256711342|gb|EEU26380.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256993529|gb|EEU80831.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Fly1]
 gi|306497874|gb|EFM67406.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0411]
 gi|306500537|gb|EFM69868.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0109]
 gi|315029118|gb|EFT41050.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4000]
 gi|315165454|gb|EFU09471.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1302]
          Length = 254

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 84/286 (29%), Gaps = 46/286 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKI 255
           Q      P ++ GDFN +     +     K  D  +    + P+         K      
Sbjct: 158 QY-----PTLLMGDFNAESGEAVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELE 212

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            IDY  +          + +             G+  SDH P+  +
Sbjct: 213 EIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|182678385|ref|YP_001832531.1| exodeoxyribonuclease III [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182634268|gb|ACB95042.1| exodeoxyribonuclease III [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 258

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 79/301 (26%), Gaps = 70/301 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WNIN                        L +Y   +  DIV LQE+   +       
Sbjct: 3   IATWNIN----------------SIRQRTEHLLRYLDEVAPDIVCLQELKCTDDA----- 41

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                  ++      +            +A+  K    ++   P     +          
Sbjct: 42  -----FPFAAIEAKGYHAAVHGQKGFNGVAILSKQPIEVKCGLPGDSTDEHARYVEG--- 93

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              +++    ++ ++ ++L +    D+ + TY  +          L    +   +     
Sbjct: 94  ---VIDSEIGRLRIVSLYLPNGNPPDTDKYTYKLA------WMDRLIAHASTLLQCEELL 144

Query: 206 VIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+AGD+N                   +L      ++++             D        
Sbjct: 145 VLAGDYNVIPMPGDCYDPAVWATDALFLPPTRARFRSLLNLGFTNALRAVSDEP-GLYTF 203

Query: 251 LRN----KIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                          ID+ ++   A   L            D  +    + SDH P+ + 
Sbjct: 204 WDYQAGAWQRNKGICIDHLLLSPQAVDHLQ-------HVVIDKERRGEDKPSDHVPVRVT 256

Query: 302 Y 302
            
Sbjct: 257 L 257


>gi|223634725|sp|Q5XJA0|TYDP2_DANRE RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
           homolog
 gi|133777713|gb|AAI15077.1| Ttrap protein [Danio rerio]
          Length = 369

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 48/294 (16%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +     K+ ++SWN++ L         +            L  Y      D+VFLQE+  
Sbjct: 116 SEVEDSKLSIISWNVDGLDTLNLADRARG-----------LCSYLALYTPDVVFLQEL-- 162

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                       +  +     +       S++   T I +RK  V+ L+           
Sbjct: 163 ---------IPAYVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTT-- 211

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   V  +G+K++++  HL+S                  ++Q + +   I 
Sbjct: 212 ---QMMRNLLIAQVTFSGQKLYLMTSHLESC----------KNQSQERTKQLRVVLQKIK 258

Query: 197 QKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +        + AGD N +               D W+ +   +   R+  +  +  N   
Sbjct: 259 E-APEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTV 316

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++   D   +           +   +     +    G+  SDH  I   ++
Sbjct: 317 PYVSRCRFDRIFLRSAKTAP--PVTPDHMALIGMEKLDCGRYTSDHWGIYCTFN 368


>gi|150376441|ref|YP_001313037.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419]
 gi|150030988|gb|ABR63104.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419]
          Length = 257

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 78/302 (25%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                     L  +      D+V LQE+ + +     
Sbjct: 1   MKIATFNINGVN----------------KRLDHLLIWLAAAGPDVVCLQELKATDG---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  +    +     L G     S   +R
Sbjct: 41  ------QFPEAAIEAAGYGAVWLGQTAWNGVAILARGCEPVLTRTGLPGDP---SDTQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I +  ++  +       +  Y  +          L        E+ V
Sbjct: 92  YIEAAV-----NGILIASLYAPNGNPQPGPKFDYKLAWHQR------LNLHAAALLEARV 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR--CN 246
           P ++AGD+N                           +K++     L    K         
Sbjct: 141 PVLLAGDYNVVPEPRDIYPTRSYDGNALVQPESRAAFKSLVEQGWLDALRKVHPQAQLFT 200

Query: 247 ANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                RN+        +D+ ++     + L            D      +  SDH P+ I
Sbjct: 201 FWDYRRNRWQRDAGLRLDHILLSGKLKRRLTGAGI-------DREIRGLEGASDHAPVWI 253

Query: 301 DY 302
             
Sbjct: 254 TL 255


>gi|94733763|emb|CAK05424.1| traf and tnf receptor associated protein, like [Danio rerio]
          Length = 383

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 48/294 (16%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +     K+ ++SWN++ L         +            L  Y      D+VFLQE+  
Sbjct: 130 SEVEDSKLSIISWNVDGLDTLNLADRARG-----------LCSYLALYTPDVVFLQEL-- 176

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                       +  +     +       S++   T I +RK  V+ L+           
Sbjct: 177 ---------IPAYVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTT-- 225

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   V  +G+K++++  HL+S                  ++Q + +   I 
Sbjct: 226 ---QMMRNLLIAQVTFSGQKLYLMTSHLESC----------KNQSQERTKQLRVVLQKIK 272

Query: 197 QKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +        + AGD N +               D W+ +   +   R+  +  +  N   
Sbjct: 273 E-APEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTV 330

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++   D   +           +   +     +    G+  SDH  I   ++
Sbjct: 331 PYVSRCRFDRIFLRSAKTAP--PVTPDHMALIGMEKLDCGRYTSDHWGIYCTFN 382


>gi|94732377|emb|CAK05007.1| novel protein similar to vertebrate TRAF and TNF receptor
           associated protein (TTRAP) [Danio rerio]
          Length = 387

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 91/294 (30%), Gaps = 48/294 (16%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +     K+ ++SWN++ L                      L  Y      D+VFLQE+  
Sbjct: 134 SEVEDSKLSIISWNVDGLDTLN-----------LAERARGLCSYLALYTPDVVFLQEL-- 180

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                       +  +     +       S++   T I +RK  V+ L+           
Sbjct: 181 ---------IPAYVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTT-- 229

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   V  +G+K++++  HL+S                  ++Q + +   I 
Sbjct: 230 ---QMMRNLLIAQVTFSGQKLYLMTSHLESC----------KNQSQERTKQLRVVLQKIK 276

Query: 197 QKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +        + AGD N +               D W+ +   +   R+  +  +  N   
Sbjct: 277 E-APEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTV 334

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++   D   +     +  +  +   +     +    G+  SDH  I   ++
Sbjct: 335 PYVSRCRFDRIFLRSAKTRPAV--TPDHMALIGMEKLDCGRYTSDHWGIYCTFN 386


>gi|330503362|ref|YP_004380231.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01]
 gi|328917648|gb|AEB58479.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01]
          Length = 262

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 81/287 (28%), Gaps = 51/287 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +++R+++ N +                        LR   +   +D+VFLQE+   +A+ 
Sbjct: 19  KRLRVLTINTHKGFTALNRRF----------ILPELRSAVQATGSDLVFLQEVLGNHALH 68

Query: 82  KVFPKN-----TWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                +      +     S      + +     D H   A+  +   +   +  +  +  
Sbjct: 69  AKRFHDWPSVPQYEFLADSMWPQFAYGRNAVYPDGHHGNALLSRFPILEHHNLDVTVSG- 127

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R  +   +++ G    V  + +                 +   QQ   L D +
Sbjct: 128 ----TEQRGLLHCRLDVPGHD-AVHAVCVHLGLR-----------EAHRRQQIGLLLDLL 171

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
              +    P ++AGDFN             + + P+     F         +       +
Sbjct: 172 ATFEP-DAPVIVAGDFNDWRLRAD------QQLAPHGLREAFEHRHGKPARSFPARMPWL 224

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D       +       S                 LSDH P++ + 
Sbjct: 225 RLDRIYTRNASAHEPQVLS-----------TRPWSHLSDHAPLAAEI 260


>gi|303289617|ref|XP_003064096.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454412|gb|EEH51718.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 332

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 88/322 (27%), Gaps = 44/322 (13%)

Query: 25  RLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78
           R+ S+N+                   +       L +    LDAD++ LQE+ +Y+    
Sbjct: 13  RVTSYNVLAQCYVRSTLFPHSPKFALKWKRRGEKLTETLAALDADVLSLQEVDAYDEHWA 72

Query: 79  -AVAK----------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
             + +                      +F K       +   +  +         +    
Sbjct: 73  PWLKRRGYGGVYKQRTKLTNDKKDGCGLFFKRAKFELLARRAIEYNDVAYGRPAGYVKTG 132

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL-----LVEINGKKIWVLDIHLKSFC-F 169
                    + +  +   +        R  V +           + + V + HL      
Sbjct: 133 AGAGEEEEGEGAGEVRNDERVPDARHVRDCVGVLALLRTKTDPRRTVLVANTHLFWDPTC 192

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228
            D   +     C+ ++   +  +D ++  +  +  P +IAGDFN       +       I
Sbjct: 193 ADVKLSQAERLCAEVAHFMREHEDKLSPGESVASTPVIIAGDFNSVPGSEVHARMLRGII 252

Query: 229 -----DPNDSLIRFPK-EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                   +      + E     + N        IDY  +       +        + + 
Sbjct: 253 PGVEDGGGELKPAPTRPETGEPAHTNVTPGFTDCIDYVFVSDG--VDVTAAEPLPAIEHL 310

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
            +        SDH  +++D  F
Sbjct: 311 GEGLPNENHPSDHLSVTVDVAF 332


>gi|330994641|ref|ZP_08318564.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1]
 gi|329758282|gb|EGG74803.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1]
          Length = 302

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 83/308 (26%), Gaps = 67/308 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+V+WNIN+L                     LL +       D+V LQE    +A+
Sbjct: 36  APDMRIVTWNINSL----------------RLRMPLLARLCAETAPDMVCLQETKVPDAL 79

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        +   L            +  +A+  +    + +  P   A+      
Sbjct: 80  ---------FPLEAVRALGFGHVAYRGMKGYNGVAILSRQPVQVLEDTPDWCARGDCRH- 129

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                + +        I V D ++ +    D  +   +P  +      +  + W +    
Sbjct: 130 -----LAVRHGSGETAIDVHDFYVPAG--GDIPDPDENPKFAHKLAFVEEARHWFS--AR 180

Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTID-------------PNDSLIRFPKEKDSRC 245
           ++   V+ GD N     + + ++    K +                  +           
Sbjct: 181 AMRRTVLVGDLNIAPLEHDVWSHKQLLKIVSHTPAETERLLAWQQTGFIDAMRHFVPPAE 240

Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+  +  +    L                    + SDH
Sbjct: 241 KLYTWWSYRNRDWSASDRGRRLDHVWVTPDLRDALRG-------MQVLRPARDWDKPSDH 293

Query: 296 CPISIDYD 303
            P+ +D D
Sbjct: 294 VPVIVDMD 301


>gi|319778623|ref|YP_004129536.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9]
 gi|317108647|gb|ADU91393.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9]
          Length = 266

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 83/308 (26%), Gaps = 74/308 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +R+ S N+N L                      + Q+      DIV LQE+   + +   
Sbjct: 2   LRITSLNVNGLRSAFNKG---------------IVQWLSICKPDIVCLQEIKISAEDLTD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +   ++      +S            A  K             G ++      
Sbjct: 47  SLRSPLIYKSEFNHAERKGYSGVGIYLREELDSAYFKH------------GIENKEFDPE 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     ++ +  K + V+  +L S    D  +                +   +    E+
Sbjct: 95  GR-----VLSVYFKNLTVVSAYLPSGSSGDERQRAKFRFLDSFGPWIDAM---MRDHVET 146

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              +VI GD+N                         +     ++    +  F +      
Sbjct: 147 GHEYVICGDWNMAHKEIDLKNWKSNLKNSGFTPEEREWMNDLLERRGFVDVFRRL-CMEA 205

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +      N+           IDY +                          +G+R SDH 
Sbjct: 206 DQYTWWSNRGQAWAKNVGWRIDYQIATPGIATLAKHAEI-----------YKGQRFSDHA 254

Query: 297 PISIDYDF 304
           P++IDY+F
Sbjct: 255 PLTIDYEF 262


>gi|326775401|ref|ZP_08234666.1| sphingomyelin phosphodiesterase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326655734|gb|EGE40580.1| sphingomyelin phosphodiesterase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 326

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 91/297 (30%), Gaps = 31/297 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R++S+N    S+                    + + +     D+V +QE     A   
Sbjct: 37  SLRVLSYNAFIFSKTLY------PNWGQDHRAAEIPKTSFFRGNDVVVIQEAFDNGASDA 90

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134
           +   +     Y T  +                       + +  +   V ++ + +    
Sbjct: 91  LLRNSASPYPYQTPVVGRSKSGWDATGGSYAAATPEDGGVTILSRWPIVRKEQF-VFKDA 149

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  N+     ++ +NG ++ V+  H +S     S       +  + S+Q + L  +
Sbjct: 150 CGGDWFSNKGFAYTVLNVNGARVHVVGTHAQSTDPGCSAG----QAAQVRSRQFKQLDAF 205

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNA----N 248
           +      +    V+AGDFN   +            +   ++    P   D+R N+     
Sbjct: 206 LDAKNIPASEQVVVAGDFNVDGHAAEYASFLADAGLSAPETRTGHPYSFDTRDNSIAAER 265

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPIS 299
                +  +D+ +      +    ++      +     S   +      LSDH P+ 
Sbjct: 266 YPDDPREDLDHVLHRTGHARPAGWKNEVIKEESAPWTVSSWGKDYTYTNLSDHYPVI 322


>gi|294941672|ref|XP_002783182.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
 gi|239895597|gb|EER14978.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
          Length = 320

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/341 (12%), Positives = 88/341 (25%), Gaps = 82/341 (24%)

Query: 19  SVAQKVRLVSWNIN---------------TLSEQEGVSLWKNSVK--------RTTSDYT 55
           S  Q ++++ +NI                 L   +  +    +                 
Sbjct: 2   SQVQHLKVMQYNILGRHFAFSKYFSYAWPYLGGSKAKNFCPAAKDAPQLPTLLDWNMRLP 61

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           +L +      ADI+ L EM SY    +      +  +++         R    D  +AI 
Sbjct: 62  MLVKTCLESSADILCLCEMDSYEDFRQALGS-YYDGYFAP--------RAGGRDDGSAIF 112

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174
            R+  ++++                  R A    ++ + G+   V+  HL          
Sbjct: 113 WRRSILKLMSAKTLHYTGGSE------RVAAICRLQNLYGQTFTVVGTHLYWKG------ 160

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---------DFW 225
                SC   S +   L   +    +   P ++ GD N   +                  
Sbjct: 161 -----SCPTQSHEVDELTTELRAILDRDEPVILCGDLNNHRDSDTFMRIRDCGMEDCFTA 215

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVM---DQNAYKFLIQESFSEIL 279
             + P       P        +            IDY  +     +    ++     +  
Sbjct: 216 AGLKPPRYTSLVPPSYVLSSRSGSYRLLPGREDEIDYIFVGGQSSDLTFKVVDAVAIDSC 275

Query: 280 YNE-----------------DDIKSRGKRLSDHCPISIDYD 303
            +E                 +         SDH P+  + +
Sbjct: 276 NDETGNGVVTGADSRDSSVAERGIPNMSHASDHLPVMCEVE 316


>gi|172038905|ref|YP_001805406.1| exodeoxyribonuclease III [Cyanothece sp. ATCC 51142]
 gi|171700359|gb|ACB53340.1| exodeoxyribonuclease III [Cyanothece sp. ATCC 51142]
          Length = 262

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 97/306 (31%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N                   +  + +  +  N   D++ LQE  +   +   
Sbjct: 1   MKIATWNVN----------------SIRTRQSHVINWLSNNSIDVLCLQETKVIDKDFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F +  + ++   ++  N            AI  R+    ++    P++G   +     
Sbjct: 45  EPFEELGYHVYIYGQKAYN----------GVAIFSRQPMTDIIMGFTPMVGEAIAQQFDE 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKE 200
            +R +  +++     I ++++++ +   + S +  Y        Q  Q LK ++    ++
Sbjct: 95  QKRVISGVID----GIRIINLYVPNGAAVGSEKYQYK------LQWFQVLKVYLDNLIQK 144

Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                 I GDFN  +                      +  + I        F K      
Sbjct: 145 ESHELCICGDFNIALEDKDIYNSKGKENHIMSSPLEREALENILEIGLQDAFRKFTTEGG 204

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           ID+  +    Y   I  +       ++       + SDH 
Sbjct: 205 H-FSWWDYRSGGFQRNRGWRIDHLYLTNKLYGKAINCTIDIEPRKQE-------KPSDHT 256

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 257 PVILEI 262


>gi|29375810|ref|NP_814964.1| hypothetical protein EF1237 [Enterococcus faecalis V583]
 gi|227518498|ref|ZP_03948547.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0104]
 gi|227553023|ref|ZP_03983072.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis HH22]
 gi|256958727|ref|ZP_05562898.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis DS5]
 gi|257078756|ref|ZP_05573117.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis JH1]
 gi|257419061|ref|ZP_05596055.1| predicted protein [Enterococcus faecalis T11]
 gi|294781151|ref|ZP_06746501.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis PC1.1]
 gi|307268651|ref|ZP_07550020.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4248]
 gi|29343271|gb|AAO81034.1| conserved hypothetical protein [Enterococcus faecalis V583]
 gi|227074176|gb|EEI12139.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0104]
 gi|227177855|gb|EEI58827.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis HH22]
 gi|256949223|gb|EEU65855.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis DS5]
 gi|256986786|gb|EEU74088.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis JH1]
 gi|257160889|gb|EEU90849.1| predicted protein [Enterococcus faecalis T11]
 gi|294451829|gb|EFG20281.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis PC1.1]
 gi|306514963|gb|EFM83509.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4248]
 gi|315031565|gb|EFT43497.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0017]
 gi|315035019|gb|EFT46951.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0027]
 gi|315166553|gb|EFU10570.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1341]
 gi|315169918|gb|EFU13935.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1342]
 gi|315575705|gb|EFU87896.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0309B]
 gi|315579851|gb|EFU92042.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0309A]
 gi|323480469|gb|ADX79908.1| endonuclease/Exonuclease/phosphatase family protein [Enterococcus
           faecalis 62]
          Length = 254

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           Q      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|269123555|ref|YP_003306132.1| exodeoxyribonuclease III Xth [Streptobacillus moniliformis DSM
           12112]
 gi|268314881|gb|ACZ01255.1| exodeoxyribonuclease III Xth [Streptobacillus moniliformis DSM
           12112]
          Length = 251

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/301 (10%), Positives = 76/301 (25%), Gaps = 78/301 (25%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +SWN+N L                         Y      +I+ LQE+        +  +
Sbjct: 5   ISWNVNGLRACIKKGF---------------LDYFNEQKPNIIGLQEIKMSEGQLDLELE 49

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             +  +             +    ++  A+      +       +   D   R       
Sbjct: 50  GYYTYY-----------NYAEKKGYSGTAIFTDVEPISVSYGIGIEEHDKEGR------- 91

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
             ++    +  + + ++  +        +             + L++          P +
Sbjct: 92  --VITAEFEDYYFVTVYTPNSKNELERLDYRMIWEDEFRSYLKKLEE--------KKPVI 141

Query: 207 IAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           + GD N     +                   + +  +  N  +  F      + +A    
Sbjct: 142 VCGDLNVAHKEIDLKNPKSNTRSAGFTIEERNKFTELIENGFIDTFRYFYPDKIHAYSWW 201

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           IDYF +  +    L+     + +             SDHCP+ +  
Sbjct: 202 SYRGNARKNNTGWRIDYFCVSSSLKDRLVDAEIHDKV-----------EGSDHCPVVLYI 250

Query: 303 D 303
           +
Sbjct: 251 N 251


>gi|157279947|ref|NP_001098489.1| deoxyribonuclease-1-like 2 [Bos taurus]
 gi|148743928|gb|AAI42237.1| DNASE1L2 protein [Bos taurus]
 gi|296473523|gb|DAA15638.1| deoxyribonuclease I-like 2 [Bos taurus]
          Length = 278

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 84/299 (28%), Gaps = 31/299 (10%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L+  L    AS AQ +R+ ++NI +    +                 ++ Q       
Sbjct: 5   LTLLAMLWALGASRAQALRIGAFNIQSFG--DSKVSDPGCGG-------VIAQILAGY-- 53

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ +QE+   +  A              E     S+    +          +   V   
Sbjct: 54  DVMLVQEVRDPDLSAVSVLMEQINSVSRHEYNFVSSEPLGRDQYKEMYLFVYRKDTVSVV 113

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                   +    A +R    + V   G         L       +  +  +   +L   
Sbjct: 114 DTYQYPDAE---DAFSREPFVVKVSAPGS----AATELVLIPLHAAPHHAVAEIDALYDV 166

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               +  W           +  GDFN    Y+   D     +  ++       +      
Sbjct: 167 YLDVIDKW------GTDDILFLGDFNADCKYVREQDWPAIRLRSSEVFKWLIPDSADTTV 220

Query: 247 ANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
            N +       D  V+      K L  +S +   + E+    + + L  SDH P+ +  
Sbjct: 221 GNSDCAY----DRIVVCGSRLRKSLKHQSATVHDFQEEFGLDQTQALAISDHFPVEVTL 275


>gi|313637385|gb|EFS02862.1| exodeoxyribonuclease III [Listeria seeligeri FSL S4-171]
          Length = 251

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 83/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y  ++DADI  LQE     A    
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFDSVDADIFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D   R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKTEPLSVQYGLGIPEHDDEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   K +++ ++  +                        +  ++ +  +   
Sbjct: 91  -----VITLEFDKFFMVTVYTPN-------SQAELKRLDYRMTFEDAILAYVKK-LDETK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTAFLEAGFVDSFRYFYPDLEDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNTGWRIDYFVVSERLKDNLVDAKIHPDVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|304404660|ref|ZP_07386321.1| Endonuclease/exonuclease/phosphatase [Paenibacillus curdlanolyticus
           YK9]
 gi|304346467|gb|EFM12300.1| Endonuclease/exonuclease/phosphatase [Paenibacillus curdlanolyticus
           YK9]
          Length = 313

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 77/291 (26%), Gaps = 32/291 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              +++ N+  L                      +    + L  D+V L E+ +     +
Sbjct: 38  PFSVMTHNMALLVPPAPYLGTDRDGA-----IAEIVARIRALAPDVVGLCEVFANGERKR 92

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +          S          D  +       +      +L     +  A D +    N
Sbjct: 93  IRDA------LSDLYPHFREGPDEGDLESDGGLLLLSRHPLLAADAMIFRACDGWDCFAN 146

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +  + + V+     I +   +                    L  Q   + ++I  +++  
Sbjct: 147 KGVIHIRVQPASWPIPLDIFYSHM------QNIETDNGVGTLYAQLTTMNNFIVTRRDPA 200

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR----------CNANKNLR 252
              +I GD N       +    +  +   D       +  S            N +    
Sbjct: 201 GSQIIMGDLNIPGENQQHYAQLYDRLRLVDCWFLADNQATSGPTLVIENNFYANPDDRPS 260

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +   +DY +M        I      + +        G+ +SDH  +   +D
Sbjct: 261 SNHRLDYVLMRGGIRLVPILADIEVLKFQ-----HNGRFISDHFGVRASFD 306


>gi|302561304|ref|ZP_07313646.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus
           Tu4000]
 gi|302478922|gb|EFL42015.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus
           Tu4000]
          Length = 605

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/333 (11%), Positives = 86/333 (25%), Gaps = 69/333 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                 + ++ + ++N+  L   +             +    +    K+   DIV L+E+
Sbjct: 295 STRPQHSTELAVATYNVENLDPSDDTFA---------AHAAAIVGNLKS--PDIVSLEEI 343

Query: 75  GSYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
              N                            +    S +            +I  A   
Sbjct: 344 QDNNGATDDGTVAADRTLAMLIDAIEAAGGPRYDW-RSVDPADKQDGGQPGGNIRQAFLF 402

Query: 117 RKKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGK 155
               V    +                       P      S +   +R+ +       G+
Sbjct: 403 NPARVSFTDRPGGDATTPTEVTKVHGKAALTLSPGRVDPASEAFEDSRKPLAGEFSFRGR 462

Query: 156 KIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE--SLVPFVIAG 209
            + V+  H  S     +L + Y P    S +    QA+ + D+  +  +       V  G
Sbjct: 463 TVVVIANHFASKGGDQALTSQYQPPARSSETQRHLQAKAVHDFTAKILKTQKNAAVVALG 522

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           D N        +    +                S   +     N   +D  ++  +  +F
Sbjct: 523 DINDFEFSETTDILEGR----GTLWSAIKSLPKSERYSYVYQGNSQALDQILITPSIRRF 578

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     +++        ++SDH P  + +
Sbjct: 579 SYDSVHINAEFHD--------QISDHDPQILRF 603


>gi|189461973|ref|ZP_03010758.1| hypothetical protein BACCOP_02640 [Bacteroides coprocola DSM 17136]
 gi|189431367|gb|EDV00352.1| hypothetical protein BACCOP_02640 [Bacteroides coprocola DSM 17136]
          Length = 345

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 92/346 (26%), Gaps = 60/346 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVR-----LVSWNINTLSEQEGVSLWKN----------- 45
           ++KY+ A  +  +   A  AQ+ +     +  +N+  L + +     K+           
Sbjct: 8   MKKYLFAFFWVCL-VIAGYAQEQKGTVYGVAFYNLENLFDTKHDEGKKDYEYLPDGRNKW 66

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             K+  S    +     +L  D       ++ + E+ + + +  +  +            
Sbjct: 67  DDKKYQSKLKNMSTVLGSLATDKTPEGAAVIGMAEVENRHVLEDLLKQP---ALTDRGYE 123

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
           I H +      +  A     K   V               R   R  +    ++ G+++ 
Sbjct: 124 IIHYEGPDERGVDCAFFYNPKLYTVTATKLVPYVLAQPTDR-PTRGFLIADGKLAGERVA 182

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  H  S           SP+      Q + LKD + Q+ +S +  VI GD N      
Sbjct: 183 FIVNHWPSR-------GAESPARERAGMQVRALKDSL-QRLDSKIKIVIMGDMNDDPMDK 234

Query: 219 GNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-- 271
              +        K +   D    +           K        D  V   N        
Sbjct: 235 SMAEALGAKREMKDVKKKDLYNPWWNTLAGGDGTLKYRGKWNLFDQIVFTGNFLNKRHKK 294

Query: 272 -----------------QESFSEILYNEDDIKSRGKRLSDHCPISI 300
                               +                 SDH P  +
Sbjct: 295 LSYFTHEIFKRDYLMQADGKYKGYPLRTQAGGRWMNGYSDHLPTVV 340


>gi|60682608|ref|YP_212752.1| hypothetical protein BF3139 [Bacteroides fragilis NCTC 9343]
 gi|265765950|ref|ZP_06093991.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|60494042|emb|CAH08834.1| putative exported protein [Bacteroides fragilis NCTC 9343]
 gi|263253618|gb|EEZ25083.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301164084|emb|CBW23640.1| putative exported protein [Bacteroides fragilis 638R]
          Length = 339

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 92/342 (26%), Gaps = 57/342 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++A  F L+      AQ        +  +N+  L +    +   +           
Sbjct: 1   MKKLIIAFNFLLLLAVGGRAQDHADGLYSVAFYNLENLFDTIHDTGKNDYEYLPDAAKGW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           + ++  S    L +    L  D        + + E+ +   +  +  +       +    
Sbjct: 61  NSEKYRSKLKNLSKVLGELSRDKVPAGPAAIGVAEVENRRVLDDLIRQPE---LAAGGYR 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H +      I  A+    K       +  L    +  +    R  + +  E+ G K+ 
Sbjct: 118 YIHYEGPDKRGIDCALLYDPKQFTPHATALVLSTPFEGDTIHKTRGFLIVGGELAGDKVC 177

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           ++  H  S    + +           + Q + LKD + +  +  +  +I GD N     L
Sbjct: 178 LIVNHWPSRGAAEPVRV-------HAAMQVKALKDSLMRT-DPDLKLIIMGDLNDDPMDL 229

Query: 219 GN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----- 268
                          + +     +   +D               D  ++     +     
Sbjct: 230 SLAVLGAKKHVEDMTEDDLYNPWWVTLEDKGVGTLLYRGKWNLFDQIILSPTLLQATKGL 289

Query: 269 -------------FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                        F     +          +      SDH P
Sbjct: 290 KYDHNEVFMRDYLFQQDGKYKGAPLRTYGGRVWLDGYSDHLP 331


>gi|257452662|ref|ZP_05617961.1| hypothetical protein F3_06314 [Fusobacterium sp. 3_1_5R]
 gi|317059202|ref|ZP_07923687.1| DNAse I-like protein DHP2 [Fusobacterium sp. 3_1_5R]
 gi|313684878|gb|EFS21713.1| DNAse I-like protein DHP2 [Fusobacterium sp. 3_1_5R]
          Length = 274

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 91/303 (30%), Gaps = 42/303 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++ +   L+F  +   +   +   + S+N+  L E                D+  + +  
Sbjct: 1   MKLFYQCLLFLCLSIASFAQEAY-IASFNVLKLGESP-------------KDFETMAKTI 46

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKN 120
           ++   D+V L+E+ +   + ++         ++ +  I+     +     + A   +K  
Sbjct: 47  EHF--DLVGLEEVITPEGLERLVKSLNKYTNHTWDYHISPFPVGTRKYKEYYAYVWKKDR 104

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V  L         +    +   R       +I       +  H                 
Sbjct: 105 VTFLSSEGFYPDRE----KLFIREPYGANFQIGKFDFTFVLQHAVYGKSETER------- 153

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRF 237
               + Q   +  +   + +     +I GDFN       +    +D  + I   D  I+ 
Sbjct: 154 -RAEAFQLVKVYRYFQDRNKKENDILIGGDFNLSAFDEAFSSLYEDKDQIIYGVDPRIKT 212

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                   N+          D   + +   +    +S   I +     K    ++SDH P
Sbjct: 213 TIGMKKMANSY---------DNIFLSKKYTEEFTGKS-GAIDFTNRQYKVMRNKVSDHLP 262

Query: 298 ISI 300
           + I
Sbjct: 263 VFI 265


>gi|225459310|ref|XP_002284160.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 593

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 96/350 (27%), Gaps = 58/350 (16%)

Query: 12  FLVPCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
            +    +S A    ++S+NI +   + +                   L       DADI+
Sbjct: 221 IVFESQSSNADTFSVLSYNILSDIYASRSAHVKCPGWALAWEYRRKNLLLEITGYDADII 280

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+ S +      PK T   +  T +        +N  I    A   ++ R  + +  
Sbjct: 281 CLQEVQSDHLENYFKPKLTKRGYSVTYKKKALQVYTANQFISDGCATFFRHDRFKEITKY 340

Query: 130 LLGAKD------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSF----------CFLDSL 173
            L               G R   ++ +      + ++   +++           C  ++ 
Sbjct: 341 ELEFDKTALSVVEGLEPGQRTEGQIRLMKGNIALVIILERVENGSSLGAFQPRICVANTH 400

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------- 224
                    +   Q   L + + +  +S +P +I GD N        +            
Sbjct: 401 IYANPNLPDVKLCQVASLVNGLEKIAQSQIPILICGDMNSLPGSSDPHKFLVTGRICPVS 460

Query: 225 ----------WKTIDPNDSLIRFP--------------------KEKDSRCNANKNLRNK 254
                     +  +    S+                        +E       N +  N 
Sbjct: 461 SKETADPLGIYNLLKLQHSIPLVSAYSSLLCSGRVKEDEKKKMNQETKEPVFTNLSGGNS 520

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +DY    +N  +              + + S     SDH  +  ++ F
Sbjct: 521 STLDYIFHTENNLEVEGLLELLNSETVGEALPSP-LWSSDHIALMANFRF 569


>gi|167915276|ref|ZP_02502367.1| Metal-dependent hydrolase [Burkholderia pseudomallei 112]
          Length = 287

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 77/281 (27%), Gaps = 58/281 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+ ++NI+                 T S    +      L AD++ LQE+     +  
Sbjct: 1   ELRIATYNIHG-----------GLGAWTASAAERIAVVLDELRADVIALQEVP----LGG 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           V   +      +   +        +        AV  +      +   L     SF    
Sbjct: 46  VRGADVLAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SFGNRE 100

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R A++  +E     + V+  HL               S +  S Q   L   +      
Sbjct: 101 PRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAAFDTR 144

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            +P ++ GD N         + F +       +  F +    R            +D   
Sbjct: 145 ALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--LDRIW 193

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +     ++L+  +                   DH P+    
Sbjct: 194 VHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 224


>gi|148556689|ref|YP_001264271.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1]
 gi|148501879|gb|ABQ70133.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1]
          Length = 285

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 83/313 (26%), Gaps = 77/313 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGS 76
               K+++ SWNIN                   +   ++RQ+ +    DI+ LQE  +  
Sbjct: 21  PPMAKLKIASWNIN----------------SVRARIDIVRQFLEEQQIDILCLQETKVRD 64

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 +F    +  F             +   +H  +A+  K        +      ++
Sbjct: 65  DTFPFGMFRDLGYDHF-----------EINGQPMHHGVAIISKLPLHDHGRHDWQDNGEA 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                    V + ++     I + ++++ +       +           Q+  +L   I 
Sbjct: 114 RH-------VGVRLDCG---IRLENVYVPAG-----GDIADREVNPKFGQKLDFLGRMIR 158

Query: 197 QKKESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
             +E   P ++ GDFN                   +     +   +    +D +      
Sbjct: 159 WSEELREPTLLVGDFNIAPLECDVWSHKQLLDVVSHTPIEVETLGRLQASHDWVDLGRSF 218

Query: 241 KDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                        +            +D+        K        E             
Sbjct: 219 VPPPARLYTWWSYRAQDWAASDRGRRLDHMWASPEVAKLATNHYVCEPC-------RSWI 271

Query: 291 RLSDHCPISIDYD 303
           R SDH P+  + D
Sbjct: 272 RPSDHIPLITELD 284


>gi|37993840|gb|AAR07002.1| sphingomyelinase [Bacillus thuringiensis]
          Length = 252

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYMK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q + ++D+I  +   +    +  GD N        N        +KT+  
Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHA 247


>gi|224371156|ref|YP_002605320.1| ExoA [Desulfobacterium autotrophicum HRM2]
 gi|223693873|gb|ACN17156.1| ExoA [Desulfobacterium autotrophicum HRM2]
          Length = 262

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 84/306 (27%), Gaps = 72/306 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +K+RLVSWN+N L         K+                + LDAD++ LQE        
Sbjct: 4   KKLRLVSWNVNGLRAAVKKDFLKS---------------MEQLDADVLMLQE-------T 41

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+            +   +H    S    ++ +A   + V +       +   D+  R  
Sbjct: 42  KLSEDQRTDEMLLVDGYDSHWAYSSVKKGYSGVAAYTRPVPLAVAPGIGIERFDNEGRI- 100

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +E++ +   + +++  +    D                A  L+         
Sbjct: 101 --------LELDFEDFILFNVYFPNGQMSDERLQYKMDFYEAFFAHADRLRK-------K 145

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               VI GDFN   N                L    +    +     +  F         
Sbjct: 146 GRSLVITGDFNTAHNEIDLKNPKPNSKRSGFLPVEREVLDRLVERGYVDTFRHFNPDTVK 205

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF + Q+              +            SDHCP
Sbjct: 206 -YSWWSYRFNARANNAGWRIDYFFVTQDIIDK---------GWVTRTFIDNDILGSDHCP 255

Query: 298 ISIDYD 303
           + I+  
Sbjct: 256 VGIELT 261


>gi|260881707|ref|ZP_05405068.2| exodeoxyribonuclease III [Mitsuokella multacida DSM 20544]
 gi|260848221|gb|EEX68228.1| exodeoxyribonuclease III [Mitsuokella multacida DSM 20544]
          Length = 253

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 74/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L         ++                  LDAD+  LQE         +
Sbjct: 3   MKCISWNVNGLRACLKKGFMES---------------FVKLDADVFALQETK-MQPEQAI 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++++     +          +  AV  +   +       +   D   R    
Sbjct: 47  LDLPGYRQYWNSAERKGY----------SGTAVFSRIEPLAVTYGLGIEEHDHEGR---- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     + + ++  +                        L        ++  
Sbjct: 93  -----VITLEFPDCYFVTVYTPNSKRGLERLAYRMEWEDAFRAYLVAL--------DAKK 139

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           +  +     +  F      R    
Sbjct: 140 PVIVCGDLNVAHTEIDLKNPKTNHHNAGFTDEERGKFTELLDAGFIDTFRALYPDRTGIY 199

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYFV      + +   +    ++            SDHCP+ 
Sbjct: 200 TWWSYLRKARDTNAGWRIDYFVTSARLREKIADATIHNEVF-----------GSDHCPVG 248

Query: 300 IDY 302
           ++ 
Sbjct: 249 LEL 251


>gi|255280445|ref|ZP_05345000.1| exodeoxyribonuclease III [Bryantella formatexigens DSM 14469]
 gi|255268910|gb|EET62115.1| exodeoxyribonuclease III [Bryantella formatexigens DSM 14469]
          Length = 253

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 79/303 (26%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++SWN+N L                        +Y K  DADI  +QE           
Sbjct: 4   KMISWNVNGLRACVQKGF---------------LEYFKEADADIFCIQESKLQEG-QIEL 47

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P   +  +++           +    ++  AV  K   +       +   D   R     
Sbjct: 48  PLEGYHQYWN----------YAKKKGYSGTAVFSKEEPLSVSYGIGIEEHDQEGR----- 92

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +     +++ ++  +                      +    ++   +++  P
Sbjct: 93  ----VITLEFDTYYLVTVYTPN-------SQNELARLPYRMTWEEAFLAYLKGLEKNK-P 140

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +  GD N                         + +  I  N  +  +      +     
Sbjct: 141 VIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKFSQILENGFIDTYRYFYPEQEGVYS 200

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + +     L+       +             SDHCP+ +
Sbjct: 201 WWSYRFRAREKNAGWRIDYFCVSECLKDRLVDARIHTEIT-----------GSDHCPVEL 249

Query: 301 DYD 303
             +
Sbjct: 250 QIE 252


>gi|225077368|ref|ZP_03720567.1| hypothetical protein NEIFLAOT_02428 [Neisseria flavescens
           NRL30031/H210]
 gi|224951296|gb|EEG32505.1| hypothetical protein NEIFLAOT_02428 [Neisseria flavescens
           NRL30031/H210]
          Length = 261

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 92/287 (32%), Gaps = 47/287 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---- 75
             + V + S+N++             S          +      L +D++FLQE+     
Sbjct: 2   SPRPVTITSYNMH----------KGMSALNRKVQVNRMADALGALGSDVLFLQEVQGQHL 51

Query: 76  SYNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           + +  +       + I   S +   ++ K       H   A+  +     + +  +    
Sbjct: 52  NRSRRSDFPDAPHYDIIGDSLDYHRSYGKNAIYPKRHHGNAILSRLPLKTENNLNI---- 107

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S ++   R  +   V   G +  ++ + +                     +Q + + D+
Sbjct: 108 -SVNKLEQRGLLHCEVVPEGWEDPLVCLCVHLNLREPD-----------RLKQYRAISDY 155

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P +IAGDFN       +  +  + +D N+    F      R     +    
Sbjct: 156 VGRYIRPESPLIIAGDFNDW--RQKSARELGRALDLNE---VFVDNTGKRPKTFPSRLPI 210

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           + +D                  +++ +E       + LSDH P+S+ 
Sbjct: 211 LSLDRIYTRN-----------LDVIDSEIHNSKDWQHLSDHLPLSVT 246


>gi|472869|emb|CAA54234.1| ARP protein [Arabidopsis thaliana]
          Length = 527

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 87/317 (27%), Gaps = 78/317 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73
           P      + V++++WN+N L        +               Q A+  + DI+ LQE 
Sbjct: 258 PPLPEGTKCVKVMTWNVNGLRGLLKFESFSA------------LQLAQRENFDILCLQET 305

Query: 74  ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
              +     + K         F+S            +   ++  A+  +   +  +    
Sbjct: 306 KLQVKDVEEIKKTLIDGYDHSFWS---------CSVSKLGYSGTAIISRIKPLSVRYGTG 356

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQ 189
           L   D+  R          V       ++++ ++ +    L  L          LS   +
Sbjct: 357 LSGHDTEGRI---------VTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIK 407

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSL 234
            L+           P V+ GD N     +   +                       +   
Sbjct: 408 ELEK--------SKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTIEERQSFGANLLDKGF 459

Query: 235 IRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           +   +++            +           +DYF++ Q+    +            D  
Sbjct: 460 VDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVH-----------DSY 508

Query: 286 KSRGKRLSDHCPISIDY 302
                  SDHCPI +  
Sbjct: 509 ILPDINGSDHCPIGLIL 525


>gi|15227354|ref|NP_181677.1| ARP; DNA-(apurinic or apyrimidinic site) lyase [Arabidopsis
           thaliana]
 gi|8488963|sp|P45951|ARP_ARATH RecName: Full=Apurinic endonuclease-redox protein; AltName:
           Full=DNA-(apurinic or apyrimidinic site) lyase
 gi|3241944|gb|AAC23731.1| DNA-(apurinic or apyrimidinic site) lyase (ARP) [Arabidopsis
           thaliana]
 gi|330254890|gb|AEC09984.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
          Length = 536

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 87/317 (27%), Gaps = 78/317 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73
           P      + V++++WN+N L        +               Q A+  + DI+ LQE 
Sbjct: 267 PPLPEGTKCVKVMTWNVNGLRGLLKFESFSA------------LQLAQRENFDILCLQET 314

Query: 74  ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
              +     + K         F+S            +   ++  A+  +   +  +    
Sbjct: 315 KLQVKDVEEIKKTLIDGYDHSFWS---------CSVSKLGYSGTAIISRIKPLSVRYGTG 365

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQ 189
           L   D+  R          V       ++++ ++ +    L  L          LS   +
Sbjct: 366 LSGHDTEGRI---------VTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIK 416

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSL 234
            L+           P V+ GD N     +   +                       +   
Sbjct: 417 ELEK--------SKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTIEERQSFGANLLDKGF 468

Query: 235 IRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           +   +++            +           +DYF++ Q+    +            D  
Sbjct: 469 VDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVH-----------DSY 517

Query: 286 KSRGKRLSDHCPISIDY 302
                  SDHCPI +  
Sbjct: 518 ILPDINGSDHCPIGLIL 534


>gi|28881335|emb|CAD70338.1| conserved hypothetical protein [Neurospora crassa]
          Length = 291

 Score = 83.4 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 80/297 (26%), Gaps = 16/297 (5%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +       AS +  +RL+++NI   +     +       R     + +     N    ++
Sbjct: 1   MLLANIGLASGSADLRLITYNIRYAATLLSTNEEP-WAVRRPLMASQVNFETSNRPEALI 59

Query: 70  FLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
            +QE+ +   V       + W                S            +N        
Sbjct: 60  CMQEVLNEQLVDLQSDLGSNWNHVGVGRNDGAQDGEYSPIIYQADTWRLDRNKTYWLSQT 119

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           P +     +  A  R       +     + ++ +      F        + S  L+ + A
Sbjct: 120 PHVVGSTGWDAALPRIVTVAQFKHRTTDVPLVFMCTH---FDHMGTVARNESAKLIIKIA 176

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRFPKEKDSR 244
                          P  + GD N ++   GN        ++ I        +     + 
Sbjct: 177 DEWM-VQGSNSTKPAPVFLGGDLNLELTEEGNKTLTTPGAFQDIKDLVPKTHWYGNAKTS 235

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +   +  + + IDY  +                 +        G  +S+H P+ +D
Sbjct: 236 TSFTTSTLDDMRIDYLFVRNPRGIQFSTYGVLTNKF------EDGVYISNHRPVVVD 286


>gi|332239562|ref|XP_003268970.1| PREDICTED: endonuclease/exonuclease/phosphatase family
           domain-containing protein 1 [Nomascus leucogenys]
          Length = 569

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 78/296 (26%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKK-NVRVLQQSYPL 130
             +       +  +                         +          V +       
Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAIVAEKPSNQLQKGAGYAGFLWDAAAGVELRDAGSQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +   L S   + + S          
Sbjct: 372 SSPSNGHGKLAGPSPYLARFKLGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +    +      I   +              + KN
Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  + 
Sbjct: 483 PQGWKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538


>gi|237724358|ref|ZP_04554839.1| metallophosphoesterase [Bacteroides sp. D4]
 gi|229437227|gb|EEO47304.1| metallophosphoesterase [Bacteroides dorei 5_1_36/D4]
          Length = 324

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 81/309 (26%), Gaps = 71/309 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +  L   L   +A     +RL+++NI   +  + V            D+  +    
Sbjct: 78  MKKTLPLLFTLLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVI 126

Query: 62  KNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            ++  ++V LQE+ S          + ++  +     +++             +     I
Sbjct: 127 NHIHPEVVALQELDSMTHRSGQKYVLGEIAGRTQMHAYFAP--------AIDYDGGKYGI 178

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  K + V  ++  L G      R   R  +    +                   +   
Sbjct: 179 GLLTKEIPVSLKTMTLPG------REEARALIMAEFDN-------YIYCCTHLSLTEEDR 225

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                           L+           PF +AGD N +                    
Sbjct: 226 -------------MASLELIKDFAAAHKKPFFLAGDLNAEPESAFIKYL----------Q 262

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             F    D   +          IDY    +   K     S   +              SD
Sbjct: 263 QDFQILSDVNQHTFPAPAPTETIDYITALKQNMKGFTVTSAQVVNEPV---------ASD 313

Query: 295 HCPISIDYD 303
           H P+ I  +
Sbjct: 314 HRPLVIVLE 322


>gi|207723157|ref|YP_002253556.1| metal-dependent hydrolase protein [Ralstonia solanacearum MolK2]
 gi|206588351|emb|CAQ35314.1| metal-dependent hydrolase protein [Ralstonia solanacearum MolK2]
          Length = 289

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 84/305 (27%), Gaps = 50/305 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84
           +++WNI      +G             D   +   A  +   DI+ LQE+ S        
Sbjct: 5   ILTWNIQWGRGADG-----------RVDLPRMLAEAHAMGPFDILCLQEVTSGFGHLPGQ 53

Query: 85  PKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           P +      +            I   + +         A+  +   +    + L    D+
Sbjct: 54  PGDDQWRELAGALGHAFTLIDGIALERHEGTRIQRFGNAIVTRLPVLHVMRHALPCPADT 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R A+E  V+     + V+  HL+ +     +    +     +    +       
Sbjct: 114 SP-TMPRMAIEATVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRVAHPPTL 172

Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             + +  PF         VI GDFN K +                +L    +        
Sbjct: 173 GPEPADGPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGPAPQ 232

Query: 248 NKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                              D+ ++ +     + +   + +            + SDH P+
Sbjct: 233 PPTFGVHDRTGWTEPAYACDFMLISEPLKTRVARVEVNSVT-----------QASDHQPM 281

Query: 299 SIDYD 303
            ++ +
Sbjct: 282 LLELN 286


>gi|160886345|ref|ZP_02067348.1| hypothetical protein BACOVA_04355 [Bacteroides ovatus ATCC 8483]
 gi|299146829|ref|ZP_07039897.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
 gi|156108230|gb|EDO09975.1| hypothetical protein BACOVA_04355 [Bacteroides ovatus ATCC 8483]
 gi|298517320|gb|EFI41201.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
          Length = 399

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 84/342 (24%), Gaps = 71/342 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+VSWNI  L +    SL  +           +  R       + +    +       
Sbjct: 64  SFRVVSWNIENLFDTHHDSLKNDHEYLPDAIRHWNYSRYKKKLADVARVITAIGEWNPPA 123

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V L E+ +   +  +  ++          + N         I  A+  ++   ++L   
Sbjct: 124 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 180

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-LS 185
              +           R  + +  + + G  + V   H  S          Y    +  L 
Sbjct: 181 S--ISIPPFKQHRPTRDLLHVSGLLLAGDTLDVFVCHFPSRSGGAKESEPYRLYVAHILR 238

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227
            +   + +       S    +I GDFN                                 
Sbjct: 239 TEVDSIMN-----IRSHPQAIIMGDFNDYPTNQSILKILKAEAPPVKTNDLASTTDSANA 293

Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268
                       +   K K     + K       +D+ ++                    
Sbjct: 294 STVTPSSLKLYHLLARKAKSKNFGSYKFRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 353

Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     ++   +  +           +SDH PI  D++
Sbjct: 354 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGISDHLPIYTDFE 395


>gi|52140457|ref|YP_086372.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus E33L]
 gi|51973926|gb|AAU15476.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus E33L]
          Length = 352

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 105/324 (32%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 110 LQEVDIKSM--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 167

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLE 174
            K        + L G +    R  +  R  VE  + +N GK + ++++HL +        
Sbjct: 168 SKYTVQTANRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA-------- 219

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P   +
Sbjct: 220 --YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 335

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 336 KFEN----------SDHNPVSAVF 349


>gi|262190835|ref|ZP_06049057.1| extracellular nuclease-related protein [Vibrio cholerae CT 5369-93]
 gi|262033284|gb|EEY51800.1| extracellular nuclease-related protein [Vibrio cholerae CT 5369-93]
          Length = 869

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTSEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|260173521|ref|ZP_05759933.1| hypothetical protein BacD2_16735 [Bacteroides sp. D2]
          Length = 399

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 84/342 (24%), Gaps = 71/342 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+VSWNI  L +    SL  +           +  R       + +    +       
Sbjct: 64  SFRVVSWNIENLFDTHHDSLKNDHEYLPDAIRHWNYSRYKKKLADVARVITAIGEWNPPA 123

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V L E+ +   +  +  ++          + N         I  A+  ++   ++L   
Sbjct: 124 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 180

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-LS 185
              +           R  + +  + + G  + V   H  S          Y    +  L 
Sbjct: 181 S--ISIPPFKQHRPTRDLLHVSGLLLAGDTLDVFVCHFPSRSGGAKESEPYRLYVAHILR 238

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227
            +   + +       S    +I GDFN                                 
Sbjct: 239 TEVDSIMN-----IRSHPQAIIMGDFNDYPTNQSILKILKAEAPPVKTNDLASTTDSANA 293

Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268
                       +   K K     + K       +D+ ++                    
Sbjct: 294 STVTPSSLKLYHLLARKAKSENFGSYKFRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 353

Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     ++   +  +           +SDH PI  D++
Sbjct: 354 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGISDHLPIYTDFE 395


>gi|224005124|ref|XP_002296213.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209586245|gb|ACI64930.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 2172

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 91/339 (26%), Gaps = 56/339 (16%)

Query: 17  TASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDAD 67
             SV    +LVS N+        +G         R   +          L +    +DAD
Sbjct: 512 PPSVGGVYKLVSANVLNFFPTLDDGSKTANGQSPRGADNADELSRQQAKLVKALLEMDAD 571

Query: 68  IVFLQEMGSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRK 118
           I+ L E+ +        NAV  +  +            IN   +  +  + I +    + 
Sbjct: 572 IIGLLELENDFLPGSSGNAVEFLVNEMNTVAGNGKYAWINPGSQFIDTSDAISSGFIYKS 631

Query: 119 KNVRVLQQSYPLL----------GAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSF 167
            +   +  S  +L                    NR  + +  +   +  I V   H KS 
Sbjct: 632 SSFEAIVGSVGILRDDSLAGLGMSGPIFDGVTTNRATIAVSFKPVKQPCITVALNHFKSK 691

Query: 168 CFLDSLENTYSPSCS-----LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGN 220
               +  N  +         +    AQ +  W+  +    S     I GD N        
Sbjct: 692 GGSGTGNNADNSDGVGNYNGMRVLAAQAVTSWLNTEPTGISCKQTAIIGDLNSYAKEDPI 751

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                + I+         K       +         +DY +++      +   +   I  
Sbjct: 752 -----RYIEGVGYTDVERKFNGENAYSYVFDGQIGTLDYVLVNPLLLNNVRGAATWSINS 806

Query: 281 NEDDIKSRG---------------KRLSDHCPISIDYDF 304
           +E                       R SDH  I +   F
Sbjct: 807 DEPTALDYNTDFGKDTLIFDASVPYRFSDHDAIIVGIGF 845


>gi|160933576|ref|ZP_02080964.1| hypothetical protein CLOLEP_02430 [Clostridium leptum DSM 753]
 gi|156867453|gb|EDO60825.1| hypothetical protein CLOLEP_02430 [Clostridium leptum DSM 753]
          Length = 261

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R +SWN+N L                        ++ + +DADI  LQE        +
Sbjct: 11  PMRFISWNVNGLRACLTKGFP---------------EFFQQIDADIFCLQETKLQQGQVE 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +        + S                ++  AV  K   +       +   D   R   
Sbjct: 56  MVLPGYRQYWNSAV-----------KKGYSGTAVFSKKEPLSVSYGLGIEEHDQEGR--- 101

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++ +     ++  ++  +               S   +     +D++    +S 
Sbjct: 102 ------VITLEFPAFYLTTVYTPNSQEG-------LKRLSYRMEWEDAFRDYLKG-LDSK 147

Query: 203 VPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA-------N 248
            P V+ GD N     +   +         +   +                 +        
Sbjct: 148 KPVVVCGDMNVAHQEIDLKNPKTNRKNAGFTDEERERFSQLLAAGFIDSYRSLYPEKIEY 207

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++       +        +             SDHCP+ 
Sbjct: 208 SWWSYRFNARKNNAGWRIDYFLVSDRIGGRIQDAKIHTQV-----------MGSDHCPVE 256

Query: 300 IDYD 303
           +D D
Sbjct: 257 LDLD 260


>gi|282904664|ref|ZP_06312539.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus C160]
 gi|282909332|ref|ZP_06317148.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|283958776|ref|ZP_06376222.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|282326900|gb|EFB57197.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282594913|gb|EFB99889.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus C160]
 gi|283789816|gb|EFC28638.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus A017934/97]
          Length = 274

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 81/278 (29%), Gaps = 28/278 (10%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE------ 96
           + N  +   +       Y K  + D+V   E     A  K+         Y T       
Sbjct: 2   YPNWGQYKRAYLIGQSSYIK--NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQ 59

Query: 97  --RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                      S       +A+  K     +  +        F    N+  V   +E NG
Sbjct: 60  SGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNG 118

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNR 213
           K + V+  H +S    DS          + ++Q + + D++ +          I GD N 
Sbjct: 119 KNVHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNV 174

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK 268
                    D  K ++ ND L                  N        +DY   D++  +
Sbjct: 175 N-KGTEEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQ 233

Query: 269 --FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
              L+ E  +E     D        +    SDH PI  
Sbjct: 234 PKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 271


>gi|269127256|ref|YP_003300626.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
 gi|268312214|gb|ACY98588.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
          Length = 235

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 79/279 (28%), Gaps = 51/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+NI                     D   L +  +   AD+V LQE+       ++
Sbjct: 4   LRVLSYNIR----------------SMRDDRAALVRVIRACAADLVCLQEVP------RL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P           R                +A   + VR+    + LL       R   R
Sbjct: 42  APTWRARRRALAARTGLTVACGRRAAGLAVLA--GRRVRLHHAEHHLLSRVPGLHR---R 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ EI G ++ V D HL               + + L+  A+ L      +     
Sbjct: 97  GLALVVAEIAGARVIVADTHL------------DLDASARLAHTAELLALLKRARDRYEA 144

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+ GD N +          W  +        +            + R    ID    D
Sbjct: 145 PVVLCGDINEEPEGPS-----WNALT-GFFTDAYAAAPRGPAATYSSRRPARRIDGIFTD 198

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ++            D      R SDH P+  + 
Sbjct: 199 PRI--EVLGCGLPPGPAPAADYP----RASDHLPVLAEL 231


>gi|152990892|ref|YP_001356614.1| exodeoxyribonuclease III [Nitratiruptor sp. SB155-2]
 gi|151422753|dbj|BAF70257.1| exodeoxyribonuclease III [Nitratiruptor sp. SB155-2]
          Length = 262

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 81/301 (26%), Gaps = 73/301 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82
           +++ ++N+N+++                +   L++++    +  DI+ LQE+        
Sbjct: 1   MKIATFNVNSIN----------------ARLELVKRWLSEKNPIDILCLQEIKCEEN--- 41

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                     +     +           +  +A+  K      Q     G  D F     
Sbjct: 42  -------RFPFKDFEELGFQCAVFGQKAYNGVAICSKYGFEEVQK----GFGDPFWDGQK 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      ++         +++     F                     LK+++TQ     
Sbjct: 91  RF-----IQAKINGTHFCNVYAPHGDFDGEKHIYKLQFFKH-------LKEYMTQFDLKK 138

Query: 203 VPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              V+ GD N                 I ++ +  + ++       +  F +        
Sbjct: 139 ENIVVVGDMNVAREDIDVWDAELLRNTIGFMDDEREAFEDFLSIGLVDLFRECH-PDTKQ 197

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 K         + IDY +      +         I  +    K R    SDH P+
Sbjct: 198 FTWWDYKNGAVWRDEGMRIDYILTSPAMKERCES-----IEVDMWTRKRRSPTPSDHAPV 252

Query: 299 S 299
            
Sbjct: 253 V 253


>gi|116695510|ref|YP_841086.1| metal-dependent hydrolase [Ralstonia eutropha H16]
 gi|113530009|emb|CAJ96356.1| Metal-dependent hydrolase [Ralstonia eutropha H16]
          Length = 243

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 76/282 (26%), Gaps = 56/282 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +VS+NI+     +                  +    + LDADIV LQE+ S ++    
Sbjct: 1   MTVVSYNIHRAVGTDR-----------RYRPDRIATVLEELDADIVALQEVESGSSNDHT 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +   T   +         +     A+  +          L            R
Sbjct: 50  LE----YLAGHTGMHVVSGFTRVRGNADYGNALLARFAPQAVNQIDLTVKGC-----EPR 100

Query: 144 RAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            A+++ +    +G +  +  I                       +Q Q L +++      
Sbjct: 101 GAIDVTLACTASGWESALRVIATHLGLRPGE-----------RRRQVQQLLNYVA--AAP 147

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            +P ++ GD N    +           +             +    ++       +D   
Sbjct: 148 PLPTILLGDVNEWFLWGRPLRWLHAYFE---------HAPHTATFPSRWPVF--ALDRIW 196

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +   A           ++          +  SDH P+   ++
Sbjct: 197 VSPRA----------HLVSVASHRSPLARVASDHLPLLARFE 228


>gi|332527156|ref|ZP_08403231.1| exodeoxyribonuclease iii, ap endonuclease, family 1 [Rubrivivax
           benzoatilyticus JA2]
 gi|332111582|gb|EGJ11564.1| exodeoxyribonuclease iii, ap endonuclease, family 1 [Rubrivivax
           benzoatilyticus JA2]
          Length = 258

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 79/304 (25%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                  T+    L ++      D+  LQE+ + +     
Sbjct: 1   MKIATFNVNG----------------ITARLPRLLEWLAESAPDVACLQELKTSDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +AV  +  + +++   L G  D        
Sbjct: 41  ------TFPLQAIEAAGYGAIWHGQKGFNGVAVLARGQQPVERLRGLPGDPDDTHSRY-- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E    ++ V  ++L +       +  Y        +  Q L +          
Sbjct: 93  ------LEAQVGELIVGALYLPNGNPQPGPKFDYK------LKWMQRLHEHAATLVGLDA 140

Query: 204 PFVIAGDFNRKINYL-----------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           P V+AGD+N                         +   ++ +                  
Sbjct: 141 PVVLAGDYNVVPTDAVRDIYSPKGWQNDALLQPESRQAYQRLLELGFTDALATLHGDAAM 200

Query: 247 ANKNLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ +++  A   L            D      ++ SDH P+
Sbjct: 201 YTYWDYFRQRWERNAGLRIDHLLLNAPAAARLKAAEV-------DRFIRGREKPSDHAPV 253

Query: 299 SIDY 302
            +D 
Sbjct: 254 WVDL 257


>gi|257086588|ref|ZP_05580949.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis D6]
 gi|256994618|gb|EEU81920.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis D6]
 gi|315027790|gb|EFT39722.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2137]
          Length = 254

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 84/286 (29%), Gaps = 46/286 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+   +E +    W             + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVRVDTEYDQDWQWFFRK-------EAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVKAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKI 255
           Q      P ++ GDFN +     +     K  D  +    + P+         K      
Sbjct: 158 QY-----PTLLMGDFNAESGEAVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELE 212

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            IDY  +          + +             G+  SDH P+  +
Sbjct: 213 EIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|260941043|ref|XP_002614688.1| hypothetical protein CLUG_05466 [Clavispora lusitaniae ATCC 42720]
 gi|238851874|gb|EEQ41338.1| hypothetical protein CLUG_05466 [Clavispora lusitaniae ATCC 42720]
          Length = 291

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 80/297 (26%), Gaps = 43/297 (14%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL---DADIVFLQ 72
            + +   K+RL + NI   +   G                 + Q  +      + +V LQ
Sbjct: 26  ASPAPPMKIRLYTHNIRYDNRNPGAGEPY-----WEKRGPAVAQSIRFHTQPGSSVVCLQ 80

Query: 73  EMGSYN---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           E+  +     +  +   + W  +             +     T          V   +Y 
Sbjct: 81  EVLHHQLFGLLDTLNRHDDWSYYGVGRTDGKTQGEYAPILFKT-----NDWEVVRSHTYW 135

Query: 130 LLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           L    +     +  A  R   E+++     K  V  ++     F          S  L++
Sbjct: 136 LSPTPEKPSKGWDAALERIVTEVVLRSKASKKHVKVMNTH---FDHVGVEARRESARLIA 192

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            + +              P  + GDFN +      +         +    +      +  
Sbjct: 193 AKMEQ----------GSEPVFLCGDFNTEPTDEPYHVLQSTGFKDSRVQGKGYGYGSTFS 242

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             N+   +   IDY     +           +      +       +SDH P+  DY
Sbjct: 243 GFNRKNEDNTIIDYIWAGNDTQ--------WQDYGVVPNF--YDFYMSDHRPVIADY 289


>gi|213965056|ref|ZP_03393254.1| exodeoxyribonuclease III [Corynebacterium amycolatum SK46]
 gi|213952170|gb|EEB63554.1| exodeoxyribonuclease III [Corynebacterium amycolatum SK46]
          Length = 265

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 77/306 (25%), Gaps = 68/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  WN+N                   +    + +  +  D D++ +QE    +     
Sbjct: 1   MRICVWNVN----------------SARTRLDRMVEMLRRNDIDVLAVQETKCKDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +T   + +       +    +A+  +      Q+        +       
Sbjct: 41  ------QFPTATFEELGYQVAHHGLNQWNGVAIISRVGLEDIQAGFPGQPGFNKDPDATP 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--AQWLKDWITQKKES 201
                 +      + V  +++ +   +      Y        +Q     L D      + 
Sbjct: 95  SLEARHIAATCGGVRVHSLYIPNGRDITDPHFEYKLEFLERLRQHIIATLDD------DP 148

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              F++ GDFN                           +  ++         +      N
Sbjct: 149 EATFMMGGDFNIAPTDGDVWSMAAFTGKTHVTPPERAAFYALEQAGMKEVTRQFTP---N 205

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  K         + ID+ +                     D  + +GK  SDH P
Sbjct: 206 QWTYWDYKAGRFFKDEGMRIDFQLASPALATKASAGFI-------DIEERQGKGASDHAP 258

Query: 298 ISIDYD 303
           + +DY+
Sbjct: 259 VIVDYE 264


>gi|85375599|ref|YP_459661.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594]
 gi|84788682|gb|ABC64864.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594]
          Length = 233

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 80/285 (28%), Gaps = 65/285 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------S 76
           ++ + S+NI+     +              D   +    + LDADI+ LQE        +
Sbjct: 2   QLTVASYNIHKAVGTDR-----------RRDPARIVSVLRELDADIIALQEADLRFGQRA 50

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 +     W      +R  +            A+ VR+    V  ++  L      
Sbjct: 51  SVLPRALLDDTPWKAVAVAKRPRSLGWHG------NALLVRRGMEIVDSEALDLP----- 99

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R A    +        V+  HL               S    S Q + +   + 
Sbjct: 100 --MLEPRGAACADIANGKGAFRVVGTHLDL-------------SGVRRSDQIRTILAHL- 143

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            +    +P ++ GDFN+            +  D    ++       S   +  + R    
Sbjct: 144 HRAHPDMPEILMGDFNQW----SVRSGAMRVFDEKWQVL-------SPGPSFPSRRPIAR 192

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +D   +              +++       +   + SDH PI   
Sbjct: 193 LDRIALSPQ----------WQVVGQGVHHSALSAQASDHLPIWAT 227


>gi|326799553|ref|YP_004317372.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326550317|gb|ADZ78702.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 649

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 79/284 (27%), Gaps = 43/284 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +     +++S+N+             +  +        +RQ   +   D+  +QE    +
Sbjct: 80  ASGNPFKVLSFNVRH--------HDDSDPQSIDERKGSIRQIIVDNAPDVFGVQEFSDDS 131

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                        F +    + + +    +   T  A+  KNVR   Q     G     +
Sbjct: 132 FET---------WFRAQMADLGYGEYYDTSITGTPKAIFYKNVRFSLQR---SGTSRLGA 179

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                 A  ++++           +                S ++  + A+ L   + Q+
Sbjct: 180 SPIINTATWVVLQDKITSNRYFISNSHWQY----------DSQAIRIENAKALAALVKQE 229

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
               +P ++ GDFN K              +  D +               +      +D
Sbjct: 230 NTDNLPVIVFGDFNAKPGITE----ILNLKNELDVVDALGDSSGDYTFHGWDATGSSKLD 285

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + + D++                       G   SDH PI   Y
Sbjct: 286 WIMSDRSMAF---------TSSRVITTSYNGYWPSDHWPIIATY 320


>gi|307323928|ref|ZP_07603137.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
 gi|306890377|gb|EFN21354.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
          Length = 303

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 73/283 (25%), Gaps = 35/283 (12%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++++N+             +          ++R+  +     ++  QE            
Sbjct: 50  VMTFNLRYAG--------DSEPNSWGRRRPVMRELLRRARPHLLGTQEGLYGQLRDIAHD 101

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                 +  T R+             T      +         P +   +++  A  R  
Sbjct: 102 LGQRYAWIGTGRMGGSRDEFMAVFYDTGRLEPVEYDHFWLSDTPNVIGSNTWGGAVVRMV 161

Query: 146 VELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +       G++ + L+ HL               S +     A  + + +    +S +
Sbjct: 162 TWVRFHDRRTGEEFYALNTHLDH------------RSQNARDHAAALITERL-GGLDSAL 208

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-EKDSRCNANKNL--RNKIPIDYF 260
           P ++ GDFN   +     D         DS     +                +   ID+ 
Sbjct: 209 PRIVTGDFNVAAHGNPVYDAMLHGGTLVDSWDTAERRGPLYGTFHGFGPLVPDGDRIDWI 268

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +                     D     G+  SDH P+    +
Sbjct: 269 LTSP---------GVRTHHAVIDTYSGDGQYPSDHLPVRTVLE 302


>gi|168209710|ref|ZP_02635335.1| exodeoxyribonuclease III [Clostridium perfringens B str. ATCC 3626]
 gi|168217871|ref|ZP_02643496.1| exodeoxyribonuclease III [Clostridium perfringens NCTC 8239]
 gi|170712212|gb|EDT24394.1| exodeoxyribonuclease III [Clostridium perfringens B str. ATCC 3626]
 gi|182380111|gb|EDT77590.1| exodeoxyribonuclease III [Clostridium perfringens NCTC 8239]
          Length = 250

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 75/299 (25%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y K+ DADI  LQE          
Sbjct: 1   MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LDLEGYHQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     +                  L         S  
Sbjct: 91  -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                         D + T+  +  +  F           
Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDIEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +           IDYF++  N    + + S    +             SDHCP+
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEIL-----------GSDHCPV 245


>gi|146279157|ref|YP_001169316.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025]
 gi|145557398|gb|ABP72011.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025]
          Length = 262

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 69/306 (22%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       L+ +       DI+ LQE  S     +
Sbjct: 2   TFTLATWNIN----------------SVRLREALVSRLLTEEMPDILCLQECKSPV---E 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P   +                     +  +A+  K   V    +       +      
Sbjct: 43  KMPLEAFRALGYNWC------VARGQKSYNGVAILSKLPLVDAGDHDFADLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   +   G  + + + ++ +    D  +   +            ++DW        
Sbjct: 93  ---VSATL---GNGVTIHNCYVPAG--GDIPDREQNVKFGQKLDYLTRMRDWCRSDTPRK 144

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GD N                  ++     D    +    + I   ++       
Sbjct: 145 A--ILVGDLNIAPREDDVWNHKALLKIVSHTPIEVDHLNALMEAGAWIDVTRKDLPEGRL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                         + SDH P
Sbjct: 203 YSWWSYRSPDWEAADKGRRLDHIWATPDIANAAHGS-------RILRAARGWLQPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|315178934|gb|ADT85848.1| extracellular nuclease-related protein [Vibrio furnissii NCTC
           11218]
          Length = 877

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/377 (12%), Positives = 95/377 (25%), Gaps = 98/377 (25%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73
             +R+ S+N+ N  +   G    ++   R  S+          +      LDADIV L E
Sbjct: 474 GDLRIASFNVLNYFNSPYGGDANQHGDNRGASNLTEFSLQQAKIVNAILRLDADIVGLME 533

Query: 74  MGSY-----NAVAKVFPKNT---------WCIFYSTERLINHSKR---DSNNDIHTAIAV 116
           + +       A+ ++  +           +            +       ++ I T +  
Sbjct: 534 IENNGFGEGAAIRQLVDQLNERLDDKKKRYQFVAVDSNQDGQTDEKDSVGSDAITTGVIY 593

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++LQ     + ++                +   R  +    ++ G    I V   
Sbjct: 594 RDKVVKLLQSRVIPMPSQQAPEVLNEEGKVIEDGQNYQRDTLAPTFQVKGGNETITVAVN 653

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
           HLKS                      +      +     A  L + + +        VI 
Sbjct: 654 HLKSKGSACWEDAAPVSEGGQGGEDADLQGSCENFRVAGAVALGEALAKIDGHK---VIL 710

Query: 209 GDFNRKINYLGN-----------------------------NDDFWKTIDPNDSLIRFPK 239
           GD N                                      DD          L     
Sbjct: 711 GDMNSYGKEDPMLVLTDYTPEKYGKVIQAARNTVIGDQPQFGDDGAVITQGFGYLSAMEL 770

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------- 289
                  +         +D+ ++  +    ++      I   E  +              
Sbjct: 771 AHKDNSWSYSYNDEVGALDHLLVSDSLKLRVVDAMDWHINGGESTLFDYNDEYKGDLPKY 830

Query: 290 ---KRLSDHCPISIDYD 303
               R SDH P  ++ +
Sbjct: 831 ADHFRASDHDPAVVELN 847


>gi|296282147|ref|ZP_06860145.1| exonuclease III [Citromicrobium bathyomarinum JL354]
          Length = 265

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 81/308 (26%), Gaps = 73/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           V + +WNIN                       L+ Q+      D++ LQE+        A
Sbjct: 2   VSVTTWNIN----------------SVRLRMPLVEQFLTAQAPDVLCLQEIKCVEEQFPA 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K F    +                     +  +A   +        +      D      
Sbjct: 46  KAFRDLGYDHIA-----------IHGQKGYHGVATVSRLPFREFSRH------DWQDNGE 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     L +   + + + ++++ +   +           +   Q+  +L+      +  
Sbjct: 89  ARHIGVQLTDPVHQGMVIENVYVPAGGDVPD-----REVNAKFGQKLDFLERMTRWAETV 143

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
             P +I GDFN                         +   + +D +       +   +  
Sbjct: 144 EQPTLIVGDFNIAPLESDVWSHKQLLKVVSHTPIEVEALQRFMDAHGWTDIGREHVPAPE 203

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +  K   + +  E            +R SDH
Sbjct: 204 RYYSWWSYRNPNWQTNDKGRRLDHMWASPDLAKQATRHTILEE-------ARNWERPSDH 256

Query: 296 CPISIDYD 303
            P++ +++
Sbjct: 257 VPLTTEFE 264


>gi|260593422|ref|ZP_05858880.1| AP endonuclease domain protein [Prevotella veroralis F0319]
 gi|260534698|gb|EEX17315.1| AP endonuclease domain protein [Prevotella veroralis F0319]
          Length = 367

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 80/302 (26%), Gaps = 65/302 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+      E  +   N           +  Y  +  AD+V LQE        
Sbjct: 100 GAIKVLSYNVYMFDSWEETNPKTNP----------IVNYIIDSKADLVCLQEAQGDGDKN 149

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               K     +   + ++              + +  +   + Q + P   + +      
Sbjct: 150 GGIYKRLKAHYPYFKLMVKKKPGADY------MVLLSRYPILWQDTIPYGSSSNQS---- 199

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
              A  + ++   K + V +    +    D      S                       
Sbjct: 200 --VAYMVDIK-GTKTLVVNNHFESNGLSNDDKAGFKSLVKGRMRTNKAKSESVHLLRKLG 256

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                 + QA  +  ++ Q  +  VP ++ GDFN       +       +   + +  F 
Sbjct: 257 KVSMRRAPQADMVARYVKQYLDKKVPIILCGDFNDNPLSYTHR------VIDKELIDCFV 310

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              +    +         ID+     +   +             D         SDH PI
Sbjct: 311 ASGNGPGISYHRSGMYFRIDHIFCSDDFEPY-------------DAHVDNSVTASDHYPI 357

Query: 299 SI 300
             
Sbjct: 358 YC 359


>gi|259419109|ref|ZP_05743026.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B]
 gi|259345331|gb|EEW57185.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B]
          Length = 333

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 81/298 (27%), Gaps = 65/298 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NIN                   +    L  +      D+  LQE+ S   V + 
Sbjct: 1   MKIASFNING----------------IKARVNALADWLDEAQPDVAVLQEIKS---VDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +           ++           +A+  K      +        D  +R    
Sbjct: 42  FPREMF-------EERGYNVETHGQKSFNGVAILSKLPLEDVRRGLPGDDSDEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +E  V +  + I +  ++L +       D          +      + LK    +   
Sbjct: 92  --IEATV-VGKQAIRICGLYLPNGNPVALNDDGTPVAGGKYAYKLGWMERLKARAAELMA 148

Query: 201 SLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             +P ++AGD+N                   +   +   ++ I        F        
Sbjct: 149 EEMPALMAGDYNIIPQAEDAKRPEAWREDALHRPESRAAFQRIVNLGFTEAFRARTRGPG 208

Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +                  ID+F++   A   L            D      ++ SDH
Sbjct: 209 HYTFWDYQAGAWNRDDGIRIDHFLLTPQAADLLRDCQI-------DKDIRGREKPSDH 259


>gi|269955565|ref|YP_003325354.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304246|gb|ACZ29796.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM
           15894]
          Length = 279

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 81/305 (26%), Gaps = 53/305 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + + N+N +       +                 +  +   D++ +QE+ + +AV   
Sbjct: 2   LTVATANVNGIRAAMRRGMD---------------SWIADRSPDVLLMQEVRAPDAVLDG 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F  + W + +    +   +     + +    AVR        +S       +     G R
Sbjct: 47  F-FDGWHVAHQACDIKGRAGVAVASRLPV-HAVRVGLEAYGPRSSEGGCEPEPAVDTG-R 103

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +    G  + V+  ++ S                      + +   + +      
Sbjct: 104 WVEADVELPGGGLLTVVSAYIHSGSTWP---VDNPVKMVEKYAYLEKVTARLAELGSGPT 160

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++AGD N   + +   +                   +  D                  
Sbjct: 161 PTLVAGDLNIAHHNVDIANWKGNLKNAGFLPEERAYLDRWFDELGWTDLGRAHGGEGPGP 220

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY + +       ++          D   +  +R SDH P+
Sbjct: 221 YTWWSWRGQAYVNDKGWRIDYQLANPALAPRALKVEV-------DRAPTYEERWSDHAPL 273

Query: 299 SIDYD 303
              YD
Sbjct: 274 IATYD 278


>gi|213626805|gb|AAI70146.1| Deoxyribonuclease I [Xenopus laevis]
          Length = 350

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 90/301 (29%), Gaps = 29/301 (9%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
             ++  +  C        ++ S+NI   S                    LL +     + 
Sbjct: 3   FLVLVAMTACFLQAGFAFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE- 52

Query: 67  DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            I+ ++E+      A+  +  + +     +   LI+     S+     A   R+  V+  
Sbjct: 53  -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYVYREDTVKPT 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +  +   G ++  + +  R             +  +           S +       +L 
Sbjct: 112 EWYHFDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAIMEVDALY 167

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                  +         +   +I GD+N   +Y+ +       +   + L+    +K+  
Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVASRHWPIIRLRHVEELVWLIGDKEDT 221

Query: 245 CNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301
             +          D  V       + ++ ++     Y+     +    K +SDH P+ ++
Sbjct: 222 TVSTNTN---CAYDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTYEMAKAVSDHYPVEVE 278

Query: 302 Y 302
            
Sbjct: 279 L 279


>gi|329120066|ref|ZP_08248736.1| endonuclease/exonuclease/phosphatase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327463597|gb|EGF09915.1| endonuclease/exonuclease/phosphatase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 250

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 82/287 (28%), Gaps = 48/287 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + + ++NI+             S          +     +L +DI+FLQE+   N   
Sbjct: 3   NPITVSTYNIH----------KGMSPLNRKVQIGDMAAALDSLKSDILFLQEVQGQNLPR 52

Query: 82  KV----FPKNTWCIFYSTE--RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           +     FP        +       ++ K       H   A+  +   + +++  +     
Sbjct: 53  EAKLSGFPAKPQHDIIADYLDYHPSYGKNAVFPHKHHGNAIISRLPILSERNLNIT---- 108

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             +R   R  +   +   G +  ++ +                       +Q   + +++
Sbjct: 109 -VNRLEKRGVLHCEIRPEGWETPIVCLCAHLNLL-----------ERDRVKQYVAIFEYV 156

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
           T       P ++AGDFN   +    N    +T+   +  +                   +
Sbjct: 157 TAYIPPDAPLILAGDFNDWRHKSPLN--IGRTLGLTEVFLDRRGTLP---KTFPARLPVL 211

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D                  EIL            LSDH P+S   
Sbjct: 212 SLDRIYTRH-----------LEILDARLHSGEPWLYLSDHLPLSATL 247


>gi|325922607|ref|ZP_08184358.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
 gi|325546902|gb|EGD18005.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
          Length = 259

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 82/303 (27%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N+L+                     L+Q+      D+V +QE          
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLGTFAPDVVGIQET--------- 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +         +  +A+  ++  +  Q          F     R
Sbjct: 36  -KLEDHKFPDAALAAAGYRSVFCGQKTYNGVAILSRSPALDVQ-----MGIPGFDDVQQR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + ++++++ +   +D+ +  Y        +    + +W+ Q+ +   
Sbjct: 90  VIAATV-----DGVRIVNLYVVNGQDVDTDKYAYK------LRWLAAVHEWLAQELQKYP 138

Query: 204 PFVIAGDFNRKINYLGNNDD-FWKTID--------------PNDSLIRFPKEKDSRCNAN 248
             ++ GDFN   +    +D   W                      L    +         
Sbjct: 139 QLMVLGDFNIAPDARDVHDPSVWNEHHILTSTAERAALEKLLALGLHDAFRLHHDDAEQF 198

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID  ++        ++          D      +R SDH P  
Sbjct: 199 SWWDYRQAGFRRNLGLRIDLTLVSDALRARAVESGI-------DREPRTWERPSDHAPAW 251

Query: 300 IDY 302
           +  
Sbjct: 252 VRL 254


>gi|303229843|ref|ZP_07316620.1| exodeoxyribonuclease III [Veillonella atypica ACS-134-V-Col7a]
 gi|303231217|ref|ZP_07317955.1| exodeoxyribonuclease III [Veillonella atypica ACS-049-V-Sch6]
 gi|302514124|gb|EFL56128.1| exodeoxyribonuclease III [Veillonella atypica ACS-049-V-Sch6]
 gi|302515473|gb|EFL57438.1| exodeoxyribonuclease III [Veillonella atypica ACS-134-V-Col7a]
          Length = 251

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 76/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L          +                  LDADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVTKGFIDS---------------FNELDADIFCLQETK-LQPHQIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  F+++     +          +  AV  +   +   +   +   D   R    
Sbjct: 45  LELPGYEQFWNSAVKKGY----------SGTAVFTRIKPIAVTNGIGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       +++  +  +     +  +               L        +   
Sbjct: 91  -----VITAEYDNFYLVCCYTPNSQRELARLDYRMTWEDAFRAYLLEL--------DKKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                          +  +     F        +  
Sbjct: 138 PVILCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKMTELLESGFTDTFRYLYPDAVDEY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  +     + +    + ++            SDHCP+ 
Sbjct: 198 SWWSYMGKARDRNVGWRIDYFITSKRLDDKIKEAKIHQQIF-----------GSDHCPVE 246

Query: 300 IDYD 303
           +D +
Sbjct: 247 LDIE 250


>gi|298482977|ref|ZP_07001159.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
 gi|298270949|gb|EFI12528.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
          Length = 378

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/342 (11%), Positives = 87/342 (25%), Gaps = 71/342 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+VSWNI    +    SL  +           +  R       + +    +       
Sbjct: 43  PFRVVSWNIENQFDTHHDSLKNDHEFLPDAMRHWNYSRYKKKLVDVARVITAIGEWSPPA 102

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V L E+ +   +  +  ++          + N         I  A+  ++   ++L   
Sbjct: 103 LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 159

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSP-SCSLLS 185
              +     +     R  + +  + + G  + V   HL S         +Y   +  +L 
Sbjct: 160 SISIPPLKQY--RPTRDLLHVSGLLLTGDTLDVFVCHLPSRSGGAKESESYRLYAAHILR 217

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227
            +   +         SL   +I GDFN                                 
Sbjct: 218 MEVDSI-----MSIRSLPQVIIMGDFNDYPTNQSIQKILEAEAPPVTTNNLASTTGSTNF 272

Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268
                       +   K K     + K       +D+ ++                    
Sbjct: 273 STVAPSSLKLYHLLARKAKSKDFGSYKYRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 332

Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     ++   +  +           +SDH PI  D++
Sbjct: 333 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGVSDHLPIYADFE 374


>gi|291515956|emb|CBK65166.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 327

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 86/309 (27%), Gaps = 44/309 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YN 78
             +RL+ WNI                     +Y    ++ +  D D+    E  S     
Sbjct: 34  NNMRLLYWNIQNGMWSGQG-----------DNYDKFVEWVRAYDPDVCVWCEAQSIYKTG 82

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              K+   + + +    E    +  +      H     R    +V+   YP+   +    
Sbjct: 83  TADKMDVADRYLVGNWGELAARYGHKYWYMGGH-----RDNYPQVITSKYPIENVERIVG 137

Query: 139 RAG----NRRAVELLVEINGKKIWVLDIH-LKSFCFLDSLENTYSPSC----SLLSQQAQ 189
                     A    +E NGK + ++ +H        ++ +   S +          + +
Sbjct: 138 SKPDSVVTHGAGWARIEKNGKTVNIVTLHTWPQGYAFEAKDRDASRAENGGDKYRRMEME 197

Query: 190 WLKDWITQKKE--SLVPFVIAGDFNRKINYL---------GNNDDFWKTIDPNDSLIRFP 238
           ++ +             +++ GDFN + +                    I  +   +   
Sbjct: 198 YICNHTIHSVPGAEKQFWMMMGDFNARSSRDNWFYKYPAGDTRFLVHDYILRHTPYVDVI 257

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSD 294
             K            K  ID+       Y+ +         Y E              SD
Sbjct: 258 AGKYPGEFKTTT-GGKSRIDFVYCTPPLYERITHADVVTDAYTEPVRDPAKLSNFWHPSD 316

Query: 295 HCPISIDYD 303
           H PI +D++
Sbjct: 317 HRPIVVDFN 325


>gi|229521687|ref|ZP_04411105.1| extracellular nuclease-related protein [Vibrio cholerae TM
           11079-80]
 gi|229341281|gb|EEO06285.1| extracellular nuclease-related protein [Vibrio cholerae TM
           11079-80]
          Length = 869

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVIDTNGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|260808574|ref|XP_002599082.1| hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae]
 gi|229284358|gb|EEN55094.1| hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae]
          Length = 272

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 74/302 (24%), Gaps = 74/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN++ L      +                  Y    D DI+ LQE          
Sbjct: 14  LKIASWNVDGLRGTVKKNG---------------HAYIPQEDPDIICLQETKCTE----- 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     + E    +    +    +   A+  K   +       +   D   R    
Sbjct: 54  -KDVPKEFTATVEGYHGYWYSPTEKKGYAGTALLSKTKPIKVTYGIGVDEHDDEGR---- 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       +++  ++ +        +         +   + L        +   
Sbjct: 109 -----VITAEFDDFYMVTAYVPNAGRGLVRLDYRGTWDEAFTAYLKKL--------DKKK 155

Query: 204 PFVIAGDFNR----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+ GD N                    +     + + T+        + +      + 
Sbjct: 156 PVVLCGDLNVAHNEIDLKNPKGNKNKTPGFTDKEREGFTTLLDEGFKDSYRELYPEETDC 215

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DYFV+       L            D++       SDHCPI
Sbjct: 216 YTFWSYMGGARAKNVGWRLDYFVLSDRLMPQLC-----------DNVIRSEVMGSDHCPI 264

Query: 299 SI 300
            +
Sbjct: 265 VL 266


>gi|325299447|ref|YP_004259364.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
 gi|324319000|gb|ADY36891.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
          Length = 358

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 79/303 (26%), Gaps = 70/303 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  ++ +++N   +S  EG                 +  Y +   ADIV LQE       
Sbjct: 99  SPTLKFLTYNTQGISPGEGNGGEN-----------AVLSYLRRCGADIVCLQEFIPGVHA 147

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +                 I      +       +A   +   +  +        +     
Sbjct: 148 SA-------EEISQALEDIYPHHASTRIKGGDVLACYSRYPILETEEIAYPSLYN----- 195

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179
               +V   +++    + V++ HL+S       +  Y+                      
Sbjct: 196 ---GSVLYRIKVGEDTLAVINNHLESNKLDAYDKKVYNEILKSPREANVKAEGKHLLRKL 252

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             + +L + QA  +   I   +      ++ GDFN             + I         
Sbjct: 253 ADAVALRAPQADSVARAIR--ENRADYMLVCGDFNDSPVSYAY-----RVIGEGLDDAFV 305

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                     N+N      ID+  +            F  +    D       R SDH P
Sbjct: 306 AAGAGPGFTYNQNHLY-FRIDHIFVSPA---------FRVLECKVDRSI----RASDHYP 351

Query: 298 ISI 300
           +  
Sbjct: 352 VWC 354


>gi|227114004|ref|ZP_03827660.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 381

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 86/275 (31%), Gaps = 27/275 (9%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           ++       +    L+ADI+   E+ + + +     +      +S   +I+         
Sbjct: 111 SSQQRKNTGKIITLLNADILCAVEVENMDVLRDFNNQVLGDDKFSQFVMIDSPN--DPRG 168

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           I  A   R +  ++      +  A   F    +R  +E+ ++   K+  +  +       
Sbjct: 169 IDVACLTRYRIAQL---RTHIFDAGKRFDPVFSRDCLEVTLDAGLKQ-PIYILCNHFKSQ 224

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228
               E            QA+ + + + Q  +      VI GD N   +   ++     ++
Sbjct: 225 SGQTEEERLRGAEKRRDQAERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWHSLAPLFSL 284

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEI------ 278
                +I   + +  R     +   K      +DY  +    ++ +++            
Sbjct: 285 SDLHPVIDPERPEKERYTYYFSGGKKGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNID 344

Query: 279 ----------LYNEDDIKSRGKRLSDHCPISIDYD 303
                     +    ++ S     SDH  + ++ D
Sbjct: 345 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 379


>gi|153825148|ref|ZP_01977815.1| hypothetical protein A5A_2794 [Vibrio cholerae MZO-2]
 gi|149741294|gb|EDM55336.1| hypothetical protein A5A_2794 [Vibrio cholerae MZO-2]
          Length = 869

 Score = 83.1 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|325498038|gb|EGC95897.1| hypothetical protein ECD227_2135 [Escherichia fergusonii ECD227]
          Length = 242

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 75/257 (29%), Gaps = 43/257 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSN 107
              LR   + + ADIV LQE+   + V  +    +P  +   F +     +  + +    
Sbjct: 19  LPELRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVY 78

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLK 165
            + H   AV  +                S   A  R  +   +     GK I V+ +HL 
Sbjct: 79  PEGHHGNAVLSRYPIE-----HYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLG 133

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                           +    Q   L +W+ +      P ++AGDFN       +     
Sbjct: 134 LR-------------EAHRQAQLAMLAEWVNE-LPDGEPVLVAGDFNDWRQKANHPLKVQ 179

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             +D       F +               + +D   +   +                   
Sbjct: 180 AGLDE-----IFTRAHGRPARTFPVQFPLLRLDRIYVKNASAS-----------APTALP 223

Query: 286 KSRGKRLSDHCPISIDY 302
               + LSDH P+S + 
Sbjct: 224 LRTWRHLSDHAPLSAEI 240


>gi|313676472|ref|YP_004054468.1| exodeoxyribonuclease iii [Marivirga tractuosa DSM 4126]
 gi|312943170|gb|ADR22360.1| exodeoxyribonuclease III [Marivirga tractuosa DSM 4126]
          Length = 255

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 95/305 (31%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S+N+N +                 ++   L Q+ +    D+  LQE+ +  +   +
Sbjct: 1   MNIISYNVNGIRA---------------AERKGLSQWLEEEKPDVFCLQELKANRSDVDL 45

Query: 84  --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    + I++ +     +S                    V   +  +    D + R G
Sbjct: 46  SVFENLGYHIYWHSAEKKGYSGVGIFTK-------------VKPNNVEIGCNMDIYDREG 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++  + +   VL+ ++ S    D  ++          Q     + +I   K+ 
Sbjct: 93  R------VIRADFENFSVLNTYMPSGSSGDPRQD-------FKMQWLSDFRAYIQDLKQE 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNA 247
           +   +I GD+N     +  +D                      ND  I   +  +   + 
Sbjct: 140 IPNLLICGDYNICHQAIDIHDPVRNKNSSGFLPEEREWMTDFLNDGFIDSFRHLNKEPDQ 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY ++ +N    L      + + +           SDHCPI
Sbjct: 200 YSWWSYRSAARERNKGWRIDYHMISENLKNQLKAADILQDVKH-----------SDHCPI 248

Query: 299 SIDYD 303
            ++ D
Sbjct: 249 KVELD 253


>gi|308186127|ref|YP_003930258.1| hypothetical protein Pvag_0607 [Pantoea vagans C9-1]
 gi|308056637|gb|ADO08809.1| Uncharacterized protein ybhP [Pantoea vagans C9-1]
          Length = 253

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/290 (11%), Positives = 80/290 (27%), Gaps = 49/290 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    +++++ N +                        LR+  +   AD+VFLQE+   +
Sbjct: 5   AQGFSIKVLTINTHKGFAPFNRRF----------ILPELREAVRATSADVVFLQEVMGTH 54

Query: 79  AVAKVFPK-----NTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           A+  +  +       +     T      + +     + H   AV  +      ++  +  
Sbjct: 55  AIHSLNHEEWPESPHYEFLADTMWNDFAYGRNAVYPEGHHGNAVLSRFPITDYENRDISV 114

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A      + NR  +   + +      +  I +                 +    Q + + 
Sbjct: 115 AG-----SENRGMLHCQIALPEPHGTLHVICVHLGL-----------KEAHRHAQMKKIC 158

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + +        P V+AGDFN                        F  +            
Sbjct: 159 EMVNS-LPPDAPVVVAGDFNDW-----QRRANAILKQGAGLKEVFSMKTGRPARTFPARF 212

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + +D   +               + +     +     LSDH P++++ 
Sbjct: 213 PLLRLDRIYVRNA-----------TVSHPWALPRKPWSHLSDHAPLAVEI 251


>gi|118464012|ref|YP_883854.1| exodeoxyribonuclease III [Mycobacterium avium 104]
 gi|118165299|gb|ABK66196.1| exodeoxyribonuclease III [Mycobacterium avium 104]
          Length = 272

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 73/305 (23%), Gaps = 64/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   S    +  +    D D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRSRLPRVLDWLARTDVDVLAMQETKCADG---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       +    +A+  +      +         S       
Sbjct: 41  ------QFPTLPFFELGYEVAHVGFNQWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    +      + +  +++ +   +      Y             L+D          
Sbjct: 95  AAEARALAATCAGVRIWSLYVPNGRAVGDPHYAYKLD------WLAALRDSAAGWLREDP 148

Query: 204 P--FVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                +AGD+N                           F   +D   + +  P       
Sbjct: 149 AAQIALAGDWNIAPQDDDVWSMEFFAGATHVSEPERRAFNAILDAQFADLVRPFAPGPGV 208

Query: 246 NANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               +        R  + ID+ +      +              D  + +GK  SDH P+
Sbjct: 209 YTYWDYTALRFPKRQGMRIDFILGSPALARR-------VTHAQIDREERKGKGASDHAPV 261

Query: 299 SIDYD 303
            +D  
Sbjct: 262 LVDVS 266


>gi|332671352|ref|YP_004454360.1| endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484]
 gi|332340390|gb|AEE46973.1| Endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484]
          Length = 668

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 80/288 (27%), Gaps = 54/288 (18%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           VP  A+    + +V WN++                 T  D   + +  +  D D+V LQE
Sbjct: 427 VPAAAADDGTLTVVDWNLHY-----------GVSPLTAVDLEAVARTIEEQDPDVVTLQE 475

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +             TW       RL    +     D     AV  ++       +PL   
Sbjct: 476 VQRGWVFGGGSDMATWL----AHRLGMTVRFAPAADRQFGNAVLARSGLTDVAVHPLPYG 531

Query: 134 KDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +        R A+   +   +G  + V  +HL+              +            
Sbjct: 532 QGPQE----RSALSATLTTADGGTVRVTSVHLQHRESATPTRLAQLDALLA--------- 578

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                 +    P ++AGD N               +     +       D+    + +  
Sbjct: 579 -----AERVDGPALLAGDLNATPGSPE-----LDLLTGAGWVSAVDAAGDADATTHPSTD 628

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +  ID+ +  +  +      +                 LSDH P++ 
Sbjct: 629 PEQRIDWVLGQRGTFTEATVGT---------------STLSDHLPVTA 661


>gi|229513544|ref|ZP_04403008.1| extracellular nuclease-related protein [Vibrio cholerae TMA 21]
 gi|229349421|gb|EEO14377.1| extracellular nuclease-related protein [Vibrio cholerae TMA 21]
          Length = 869

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 50/373 (13%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   I     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYINAVVVKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  S   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKTKVVDASDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|325854960|ref|ZP_08171676.1| exodeoxyribonuclease III [Prevotella denticola CRIS 18C-A]
 gi|325483938|gb|EGC86878.1| exodeoxyribonuclease III [Prevotella denticola CRIS 18C-A]
          Length = 249

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 86/302 (28%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L    G                   Q  K L+AD   LQE     A    
Sbjct: 1   MKLISWNVNGLRACVGKDFE---------------QQFKALNADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  K+  +       +   D   R    
Sbjct: 45  ISFPGYASYWN----------YADKKGYSGTAIFTKHKPLDVTYGIGMDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                   +  +  +D++  + +   
Sbjct: 91  -----VITLEMDDFYLVTVYTPN-------SQDGLRRLDYRMKWEKDFQDYL-HRLDRKK 137

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+ GD N                         +   + +D            +    +
Sbjct: 138 PVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKMTQLLDSGFIDTFRTLYPEQVTYS 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R +         IDYF++ +     L        +             SDHCP+ +
Sbjct: 198 WWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIHTEI-----------MGSDHCPVEV 246

Query: 301 DY 302
           D 
Sbjct: 247 DL 248


>gi|324511832|gb|ADY44920.1| Neutral sphingomyelinase [Ascaris suum]
          Length = 392

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 85/295 (28%), Gaps = 35/295 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N   L +      W    +      + L +   + + DI+ LQE+ S     ++
Sbjct: 5   LRVITLNCWALPQP-----WPVGSRDRQYRLSKLCEALLSTNYDIISLQEIWSVRDFDRI 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---RA 140
                           ++            I  R   V  L   Y L G           
Sbjct: 60  ------NSAIKDVYPYSYYFHSGFTGSGVCIFSRHAIVSTLMHRYSLNGFAHHIHRGDWF 113

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G +    + +EI   +I     HL +       +            QA  L  ++     
Sbjct: 114 GGKVVGMVQLEIGTYRINFYATHLHA-----EYDRENDLYLPHRLSQAFELSQFVKHTSH 168

Query: 201 SLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           +    ++ GDFN + + LG           D +    + +        ++   C   +NL
Sbjct: 169 AADLTILTGDFNLEPDDLGYRLIVDNANLIDAWLARPNKSGCETGMTCDRPDNCYTARNL 228

Query: 252 RNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +        +DY +           +              +    SDH  +  D+
Sbjct: 229 KQPNPAGKRLDYIMYKCG---KSDVDLVMCENRLGRIPGDKQINYSDHLGVYADF 280


>gi|261250441|ref|ZP_05943016.1| extracellular nuclease-related protein [Vibrio orientalis CIP
           102891]
 gi|260939010|gb|EEX94997.1| extracellular nuclease-related protein [Vibrio orientalis CIP
           102891]
          Length = 871

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 103/373 (27%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G     +   R              +      LDADI+ L E
Sbjct: 476 GDLRIATFNVLNYFNSPFGGDANPHGNNRGANSFEEFEVQQAKIVNAILRLDADIIGLME 535

Query: 74  MGSYN-----AVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116
           + +       A+ ++  +         + + I          +  +       I T +  
Sbjct: 536 IENNGFGDSGAIRQLVDQLNAQIEKKKDRYDIVAIDSNGDKVTDENDYIGTDVITTGVIY 595

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEING--KKIWVLDI 162
           R K V++       + ++                +   R ++    ++ G  +KI V   
Sbjct: 596 RPKVVKLKDSRVIPMPSQQAPEVLDDNGKVIEDGKNYQRDSLAPTFKVKGTKEKITVAIN 655

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202
           HLKS                      +      +     A  L D +++ K         
Sbjct: 656 HLKSKGSKCWEDAAPVEQGGQGGQDLDKQGSCENFRVAAAVALGDALSEIKGHKVILGDL 715

Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  P ++  D+             N  I+      D    I  +   I    +   
Sbjct: 716 NAYGMEDPLLVLTDYSQEKYGKTIKAARNTYIDGQVQFGDEGAVITDSYGYINAVAKAHP 775

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290
              +         +D+ +M  +  K  +  +   I   E  +    +             
Sbjct: 776 NSWSYSYNDEVGALDHLLMSPSLEKHFVDATDWHINGGESKLFDYNEEYKGDLPKYNDHF 835

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 836 RSSDHDPAVLELN 848


>gi|239945332|ref|ZP_04697269.1| putative exonuclease [Streptomyces roseosporus NRRL 15998]
 gi|239991789|ref|ZP_04712453.1| putative exonuclease [Streptomyces roseosporus NRRL 11379]
 gi|291448794|ref|ZP_06588184.1| exonuclease [Streptomyces roseosporus NRRL 15998]
 gi|291351741|gb|EFE78645.1| exonuclease [Streptomyces roseosporus NRRL 15998]
          Length = 259

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 77/303 (25%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N                  T+    L  + ++   D++ +QE          
Sbjct: 1   MRIATYNVN----------------SITARLPRLLAWLESSGTDVLCIQETKCTAE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +    +       +A+  +       +  L G  +       R
Sbjct: 41  ------QFPAEALREAGYESAVNATGRWNGVALLSRVGLTDVVTG-LPGGPEYDGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + +  +++ +   ++     Y        +  + L+  +       +
Sbjct: 94  A-----ISATCGPLRLWSVYVPNGREVEHEHYAYK------LRWLEALRKAVAADAAGSL 142

Query: 204 PFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANK 249
           PF + GDFN         D                       + L            A  
Sbjct: 143 PFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERAALAALEAEGLSEVHPRPLKYDRAYT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID    +      +            D  + +GK  SDH P+ +
Sbjct: 203 FWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYV-------DREERKGKGASDHAPVVV 255

Query: 301 DYD 303
           D D
Sbjct: 256 DLD 258


>gi|158423021|ref|YP_001524313.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571]
 gi|158329910|dbj|BAF87395.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571]
          Length = 270

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 75/303 (24%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N ++                     L  + +    D+  LQE          
Sbjct: 1   MRIATFNVNGVNG----------------RLPPLLDWLRQSKPDVACLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  +    ++    L G  D      +R
Sbjct: 35  LKAPHERFPAAELEQAGYGAVWLGQKAWNGVAILARGEMPVETRRGLPGDPD---DIQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + +  ++  +       +  Y        +  + L+++  Q  +  +
Sbjct: 92  YIEAAV-----GGVLIGCLYAPNGNPAPGAKFDYK------LRWLERLRNYSAQMLDLDL 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN                           +  +  +  +              
Sbjct: 141 PMVLAGDFNIMPEERDVYAPERWRDDALFRPEVRAAFADLRDDGWVDALRHLHPDARLYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          ID+ ++       L+           D         SDH P  I
Sbjct: 201 FWKYLRNAFARDAGLRIDHLLLSPALAPRLVSAGV-------DRAVRGRDHASDHAPAWI 253

Query: 301 DYD 303
             D
Sbjct: 254 TLD 256


>gi|159490968|ref|XP_001703445.1| hypothetical protein CHLREDRAFT_143864 [Chlamydomonas reinhardtii]
 gi|158280369|gb|EDP06127.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 437

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/325 (9%), Positives = 84/325 (25%), Gaps = 65/325 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73
           P   + +  + ++SWN+  L                      +        A++V LQE 
Sbjct: 133 PAPPAGSTPLNILSWNVAGLRAL------------LKKTPDAVSSLVSREAAEVVCLQEH 180

Query: 74  ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                    V ++     W   ++           +    ++ ++V  ++  +       
Sbjct: 181 KLQANHQKEVEELLGLQGWHHAWAF---------STAKLGYSGVSVHTRSPPLSVVVGLG 231

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G   +            +V +  + ++++++++ +                 + +    
Sbjct: 232 HGGPGAADPDPEHEGEGRVVTVELEGLFLVNVYVPNSGEG------LKRLDYRVGRWDGA 285

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSL 234
              ++   +    P V+ GD N                         + F + +     L
Sbjct: 286 FAAFLQGLQARGKPVVVTGDLNCAHKEIDIHAPKTNLKSAGFTPEERESFGRLLLAEAGL 345

Query: 235 IRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYK---------FLIQESFS 276
               +       A      +           +DYF+  ++                   +
Sbjct: 346 ADTFRRLYPDTVAYTYFTRRFNCREKNKGWRLDYFLTSESMMPPELQQGGEGAAAAAGPA 405

Query: 277 EILYNEDDIKSRGKRLSDHCPISID 301
                 D    +    SDH P+ + 
Sbjct: 406 SAWAVYDTWIMQDVYGSDHLPLGLT 430


>gi|308806584|ref|XP_003080603.1| Endonuclease/exonuclease/phosphatase (ISS) [Ostreococcus tauri]
 gi|116059064|emb|CAL54771.1| Endonuclease/exonuclease/phosphatase (ISS) [Ostreococcus tauri]
          Length = 546

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 97/303 (32%), Gaps = 36/303 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           T + + ++R+ ++N   L +                       ++ +  + +DAD+V L 
Sbjct: 38  TNAGSARLRVGAFNARWLFDGVSDVSASPYANGEANAAREHGRMVNEVIRAIDADVVVLT 97

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E  +   +               +     +++        +  V +   R  +  Y    
Sbjct: 98  ETETCETLDWAREGTPNVARALVKGTDTATQQQIGILSKISF-VEEPWRREDRADYDAAT 156

Query: 133 AKDSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +   +S + N           ++  + + ++  HLK+           S SC+    QA+
Sbjct: 157 SACGYSGSKNSGVSKHAVARFKVGARTVALIGAHLKANPT-------QSSSCAQREAQAE 209

Query: 190 WLKDWITQKKESLVPFVIAGDFNR------KINYLGNNDDFWKTIDP------NDSLIRF 237
            L+    ++ E+    ++AGD N                   + +        ++     
Sbjct: 210 VLRSIARERFEAGDAVIVAGDLNDYSDLHVDAGNNSPTSRVLRMLRDLNNDGVDELQEVG 269

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                S     ++  +K  +DY ++ ++ +  +      +++            +SDH P
Sbjct: 270 ELVAVSDRYTWRSGSSKAKLDYILVSRSDFDLVSASIQHDLV---------NASVSDHFP 320

Query: 298 ISI 300
           +  
Sbjct: 321 LLA 323


>gi|71892211|ref|YP_277944.1| exonuclease III [Candidatus Blochmannia pennsylvanicus str. BPEN]
 gi|71796317|gb|AAZ41068.1| exonuclease III [Candidatus Blochmannia pennsylvanicus str. BPEN]
          Length = 268

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/310 (10%), Positives = 71/310 (22%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L      L  D++ LQE   ++     
Sbjct: 1   MKFVSFNINGL----------------RARMHQLNAIIFQLKPDVIGLQETRVHDDF--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +         +  +A+  +   +                   +
Sbjct: 42  -------FPVKEILQHGYHVYYYGQKKYHGVALFLRQTPLTVTR-----GLTDDDNLSQK 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +      + +++       F       +           +  ++++     S  
Sbjct: 90  RIIMADIMTPIGTLTIIN-----GYFPQGENKNHPEKFMYKKNFYKSFQNYVEHTYHSHS 144

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                          L     +   +     +  +     
Sbjct: 145 LLLIMGDMNISPTDFDIGIGEKNKKRWIASGRCSFLPEERTWINRLMSWGLVDIYRNMHP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           ID  +  +                +      R +R S
Sbjct: 205 QNDERYSWFSYRSHGFYKNNGLRIDLILATRPLANRCKNS-------DISYDIRRMQRPS 257

Query: 294 DHCPISIDYD 303
           DH P+ +D+D
Sbjct: 258 DHAPVWVDFD 267


>gi|288802726|ref|ZP_06408164.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica
           D18]
 gi|288334876|gb|EFC73313.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica
           D18]
          Length = 324

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 84/317 (26%), Gaps = 46/317 (14%)

Query: 20  VAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTT----SDYTLLRQYAKNLD--- 65
              ++ +V  N   L +        +   L  +    T          + Q         
Sbjct: 18  AQTRLTIVELNTENLFDTRHDTLKNDYEFLPDSPRHWTRTKYWQKLNRIGQTIIACGEDS 77

Query: 66  -----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 DIV L E+ + + +  +  ++        +    +    SN+     +A+    
Sbjct: 78  SGWTLPDIVGLCEVENDSVLFDLTRRS-----LLRKARYEYVMTASNDARGIDVALLYSP 132

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179
                     +           R  + +  EI +G  + V  +H  S    +       P
Sbjct: 133 FSFRLIKADTIRVIPMKEMRPTRDILHVEGEIESGDTLHVFLLHAPSRMGGELY---SRP 189

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
               + +Q   + D + ++       ++ GDFN   +       +   +    +      
Sbjct: 190 FRKHVMEQLCNVIDSLRRQYVEPK-LLVMGDFNDYADSPSLQLAYEHGLINVSAEAHGCN 248

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS--------------EILYNEDDI 285
                    +       +D  ++ +N   ++I    +                     + 
Sbjct: 249 GAKG---TYRYHGAWGSLDQILVSKNLRSWMIDCRINDARFLLEEDTKYGGVKPRRNYNG 305

Query: 286 KSRGKRLSDHCPISIDY 302
                  SDH P+ +  
Sbjct: 306 MRFNNGFSDHLPLVLRL 322


>gi|228924315|ref|ZP_04087565.1| hypothetical protein bthur0011_52690 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228835341|gb|EEM80732.1| hypothetical protein bthur0011_52690 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 344

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 96/338 (28%), Gaps = 56/338 (16%)

Query: 23  KVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++R  ++N+   +E          K S          +++    +  D++  QE+ S   
Sbjct: 2   QIRCGTFNLYQFAEPPFKWYEPGNKYSDAEWLMKKEWIKEQILKMKCDVIGFQEVFSSAI 61

Query: 80  VAKVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF- 137
           +  +  +  +         + +            AIA +   + V     P    ++   
Sbjct: 62  LKSLVEELGFIHFETVETPVTDIDNPLVFIKPVVAIASKYPIISVNPVKVPDSIMEEIPV 121

Query: 138 --SRAGNRRAVELLVEING-KKIWVLDIHLKSFCF---------LDSLENTYSPSCSLLS 185
                 +R  ++  + I+G   I     HLKS             D+L+N    +    S
Sbjct: 122 NADFKFSRIPIKATIHIDGSGDIIFYVSHLKSKNPAVRDLHLNPDDALDNKILATLRARS 181

Query: 186 Q-----------QAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT----- 227
                       +A  L   I++       VP ++ GD N   + +       +      
Sbjct: 182 IGHIISLLQRGAEAAVLYHEISETLHTHKEVPVILLGDLNDDEHSIPIEALTNRERLLKI 241

Query: 228 ----IDPNDSLIRFPKEKDSRCN------------ANKNLRNKIPIDYFVMDQNAYKFLI 271
               ID ++  I +  +     +             +   +     DY  +         
Sbjct: 242 NGKPIDDDEQKIVYNYKLYDAFDLAPNQSGQKRLPTHYYKKLGNVFDYIFVSNVLNGKNE 301

Query: 272 QESFSEILYNEDDIK-----SRGKRLSDHCPISIDYDF 304
           Q       Y   D          K  SDH  +    +F
Sbjct: 302 QHLGRVSAYKVLDHHLKCDDIENKTQSDHAQVVATIEF 339


>gi|115522424|ref|YP_779335.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53]
 gi|115516371|gb|ABJ04355.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53]
          Length = 270

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 68/306 (22%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L +WNIN                       L+ +  +    D++ LQE          
Sbjct: 3   FTLTTWNIN----------------SVRLRIDLVAKLLEAEQPDVLCLQETKCP---DDA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                +    +  +AV  K               DS       
Sbjct: 44  FPLKRFKQL------GYEHVALNGQKGYHGVAVVSKIPFAETHIRSFCDNLDSRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +       +  ++  +       D  +   +P  S        +K       +   
Sbjct: 93  --ISVSFAAEHTQAPLVLHNFYVPAGGDIPDPELNPKFSHKLSFLDEMKACEPLHPQGEA 150

Query: 204 PFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N   +                     D         + +             
Sbjct: 151 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPIECDKLLAAQQYGNWIDVARDRIPLDQKV 210

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  + +               +N        +R SDH P
Sbjct: 211 YTWWSYRAADWTVGDRGRRLDHIWVSKALQS-------HVQDFNILRDARGWERPSDHVP 263

Query: 298 ISIDYD 303
           ++  ++
Sbjct: 264 VTAVFE 269


>gi|70990110|ref|XP_749904.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus Af293]
 gi|66847536|gb|EAL87866.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus Af293]
          Length = 439

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 99/313 (31%), Gaps = 34/313 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R + L L    +P  A+ A +  +++ N+  L      +         +     + +  
Sbjct: 1   MRSFPLVLAA-GIPALAATAGEFNILALNVAGLPPILNGNDVPGDKSDNSR---QIGRKF 56

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                D++ +QE  +Y+A         +       R          + ++T      +  
Sbjct: 57  AEYGYDVIHVQEDFNYHA-------YIYETDNHPYRTPTSGGAGIGSGLNT--LSNFEFT 107

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++  +      +       +    + V +  G  +   ++H  +    D         
Sbjct: 108 NFVRTKWATCSNAEGADCLTPKGFTSMRVRVEEGVYVDFYNLHADAGSKDDD-------- 159

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFP 238
               S   Q L D+I     +    ++ GD N +    G+N   ++T +   N  +    
Sbjct: 160 VKARSANLQQLADYIK-VNSAGNAVLVFGDTNARYTRTGDNIRVFQTQNGMVNPWVELIL 218

Query: 239 KEKDSRCNAN-------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +       +N           +   +D      +    L    ++    +   +  +G  
Sbjct: 219 QGAAPAEGSNALLCQNPSTTSDCETVDKIFYRGSRAVDLRAVFWN--YESNKFLSDKGTI 276

Query: 292 LSDHCPISIDYDF 304
           LSDH PI+ ++ +
Sbjct: 277 LSDHNPITTNFTW 289


>gi|260663817|ref|ZP_05864702.1| exodeoxyribonuclease III [Lactobacillus fermentum 28-3-CHN]
 gi|260551578|gb|EEX24765.1| exodeoxyribonuclease III [Lactobacillus fermentum 28-3-CHN]
          Length = 279

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 85/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWNI++++     +  +    R       + +  K    D++ +QE     +    
Sbjct: 1   MRFISWNIDSINAALTGTSARAEETR------AVLEKIKAAAPDVIAIQETKLSKSGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      ++   ++  S  +     +       K     + +YP +GA +     G  
Sbjct: 55  KHQGVLAELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDEEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  K  ++ +++  +                   +    L        +   
Sbjct: 114 -----IITLEFKNFYLTEVYTPNSGTGLKRLAERQEWDDRYREYLTEL--------DRQK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                         + +  +        F         A 
Sbjct: 161 PVIASGDFNVAHEEIDLAHPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       ++  +  +                DH PI
Sbjct: 221 SWWAQRAVTSKVNNSGWRIDYWLVSDRLADQVVSSTMIDSGERR-----------DHAPI 269

Query: 299 SIDYD 303
            +D +
Sbjct: 270 QLDIN 274


>gi|254724480|ref|ZP_05186264.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A1055]
          Length = 352

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 109/327 (33%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE+            +  + K  P         +   +    + N             +
Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYA-----EAGL 164

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N GK + ++++HL +     
Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHSIPVNNGKHVRLVNLHLSA----- 219

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK+++ +  ++    ++ GD N+ ++ +  +D  +    P 
Sbjct: 220 -----YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDRNQLVSDVQLSDPKFVKERPE 274

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349


>gi|226311672|ref|YP_002771566.1| hypothetical protein BBR47_20850 [Brevibacillus brevis NBRC 100599]
 gi|226094620|dbj|BAH43062.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 226

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 76/283 (26%), Gaps = 71/283 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----A 79
           +R+VS+NI+                   +    +    K+L  DI+ LQE+         
Sbjct: 1   MRVVSYNIH-----------SGRDLWWRNRLNEMTLTLKDLQPDIIGLQEVHQNGKYGYQ 49

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            + +  +  + + +S           S  D +    +  K      ++  L        R
Sbjct: 50  ASYIADQLQYHLAFSP--------SISIGDGYYGNTLLSKYALENVEAIVLPA------R 95

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  +    +  G+ I +   H                       Q Q +   I Q  
Sbjct: 96  KEQRTLLYASFQGFGRTITLCVTHCSLNQVS-------------RLAQLQLMSTLIQQHA 142

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           ++  P ++ GDFN        +      +   +                     +  +DY
Sbjct: 143 KA--PLLLMGDFNASNVSFTPHLMDCALVSGQEKKPTL-------------PAFRRRLDY 187

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                               +N +  +      SDH P+  D 
Sbjct: 188 IFAS--------------HHWNIEHYELLPVNWSDHVPVIADL 216


>gi|149280306|ref|ZP_01886428.1| endonuclease/exonuclease/phosphatase family protein [Pedobacter sp.
           BAL39]
 gi|149228995|gb|EDM34392.1| endonuclease/exonuclease/phosphatase family protein [Pedobacter sp.
           BAL39]
          Length = 370

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 92/307 (29%), Gaps = 60/307 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + + +  VR++++N++     EG                 + +  ++ + DI+  QE  +
Sbjct: 99  SKADSSVVRMMTYNVHGFKPHEGQEF--------ERVKHQMLKLIEDQNPDIIGFQEYYT 150

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                     +   I  +       S  +      + +A+  K   V +   P       
Sbjct: 151 RRRGTFDITDSLKTILKTPYYYFVSSSENDY--EASGLAIFSKYPIVNKGVIPFGNNHIG 208

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT-------------------- 176
                   ++ + VE++ KK+ V ++HL+S  F                           
Sbjct: 209 N------GSIFIDVEVHQKKLRVYNVHLQSISFDKQDYTYLDKVKKSMDPDLQPSKRIAG 262

Query: 177 -YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               +    S Q   +K  +       +P++IAGDFN             +      S  
Sbjct: 263 MLKNAFMKRSMQVDLMKAHMGNCS---IPYLIAGDFNDTPASY----AATQMTKSLKSTF 315

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           R       +    K       IDY  + ++                  +      +LSDH
Sbjct: 316 REKGSGFGQTYNGKFPNF--QIDYIAVTKDIEVL--------------NHLVIPAKLSDH 359

Query: 296 CPISIDY 302
            P+  D 
Sbjct: 360 FPVRSDL 366


>gi|261362111|gb|ACX71490.1| sphingomyelinase [Bacillus weihenstephanensis]
          Length = 242

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 83/217 (38%), Gaps = 21/217 (9%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+  
Sbjct: 30  STNQNDTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVFD 83

Query: 77  YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            +A  ++           T         E         S+      +A+  K   V +  
Sbjct: 84  NSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQ 143

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y +           N+  V   V+ N + + V+  HL++    D++    SP+ S+ ++Q
Sbjct: 144 Y-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQ 198

Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223
            Q ++++I  +   +    +I GD N       NN D
Sbjct: 199 LQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSD 235


>gi|6647483|sp|O42446|DNAS1_OREMO RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I; Flags: Precursor
          Length = 284

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 87/278 (31%), Gaps = 28/278 (10%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKVFPKN 87
           +NI +           ++     +   ++ +  K    D++ +QE+  S  +  +     
Sbjct: 32  FNIKSFG---------DTKASNATLMNIITKIVKRY--DVILIQEVRDSDLSATQTLMNY 80

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
                   + +++     S          R+  V V++      G +++     +R    
Sbjct: 81  VNKDSPQYKYIVSEPLGASTYKERYLFLYREALVSVVKSYTYDDGPEETGQDTFSREPFV 140

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           ++       +    +  +      ++    +    +L  +A+W          +    V+
Sbjct: 141 VMFSSKNTAVRDFTLIPQHTSPDLAVRELNALYDVVLDVRARW----------NTNDIVL 190

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
            GDFN   +Y+  +      I  + +      +      +          D  V+  +  
Sbjct: 191 LGDFNAGCSYVSGSAWQQIRIFTDKTFHWLITDAADTTVSQTVCPY----DRIVVTTDMM 246

Query: 268 KFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303
           + ++Q S     Y  D    +   L  SDH P+ +   
Sbjct: 247 RGVVQNSAKVYNYMTDLNLKQDLALAVSDHFPVEVKLS 284


>gi|150388422|ref|YP_001318471.1| exodeoxyribonuclease III Xth [Alkaliphilus metalliredigens QYMF]
 gi|149948284|gb|ABR46812.1| exodeoxyribonuclease III Xth [Alkaliphilus metalliredigens QYMF]
          Length = 251

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 79/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N +                         Y   +DADI  +QE          
Sbjct: 1   MKLVSWNVNGIRACVKKGF---------------LDYFNEVDADIFCIQESKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +  +        +   R    
Sbjct: 45  LDLEGYEQYWN----------YAVKKGYSGTAVFTKEKPISVKYGVGEEEDEEEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + ++++++  +        +             + L            
Sbjct: 91  -----VLTLEFDQFYLVNVYTPNSKRGLERLDGRMIWEDEFRAHLKELDAI--------K 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                   +    +  +  +  F         A 
Sbjct: 138 PVILCGDLNVAHEEIDLKNPKSNKKSAGFTNEEREKMTELLTSGFIDSFRYFYPDLEGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYFV+ +     L + +                  SDHCP+ 
Sbjct: 198 SWWSYMGKARERNAGWRIDYFVVSERLKNQLKEAAIH-----------PQIMGSDHCPVV 246

Query: 300 IDYD 303
           ++ D
Sbjct: 247 LELD 250


>gi|126336177|ref|XP_001368612.1| PREDICTED: similar to DNase1-Like III protein [Monodelphis
           domestica]
          Length = 316

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 85/288 (29%), Gaps = 31/288 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78
             +++ S+N+ +            + +  +    ++ +  K    DI+ L E+       
Sbjct: 20  HSLKICSFNVRSFGA---------AKRDNSQVMDVIVKIIKRC--DIMLLMEIKDSRNII 68

Query: 79  --AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              + K+    +       + +I+     +      A   RK  V V ++SY     ++ 
Sbjct: 69  CPTLIKMLNGKSRRGTKDYDYIISSRLGRNAYKEQYAFLYRKNMVSV-KKSYHYPDTQNG 127

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              A +R    +        +    I         S+         L        + W  
Sbjct: 128 DEDAFSREPFVVWFYSPQTAVTDFVIIPLHTTPETSV----REIDELFDVYMDVKRQW-- 181

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                   F+  GDFN   +Y+         +  +   +    + +              
Sbjct: 182 ----KPENFIFMGDFNAGCSYVPKKSWKEIRLRMDPKFVWLIGDNEDTTVKGTTKCAYDR 237

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
           I   +  Q     ++ +S S   + +    +  + L  SDH P+  + 
Sbjct: 238 I--VLQGQKINSSVVPDSASIFDFQKAYRMTEEEALGISDHFPVEFEL 283


>gi|114765781|ref|ZP_01444876.1| hypothetical protein 1100011001350_R2601_23720 [Pelagibaca
           bermudensis HTCC2601]
 gi|114541888|gb|EAU44924.1| hypothetical protein R2601_23720 [Roseovarius sp. HTCC2601]
          Length = 306

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 90/298 (30%), Gaps = 38/298 (12%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                    +R+ + N++ + +  G    + S          L    + L+AD++  QEM
Sbjct: 34  ALPPPPEDALRIATLNVHYI-DLRGQGEGRWSRAGWERRKPALGAAVEALEADVIAFQEM 92

Query: 75  G-------SYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQ 126
                     + +A+ +  +    + +       +   +      T              
Sbjct: 93  ESFRGGNADTDNLARRYLLDRLSGYEAAAIGDWRTFPSTQPIFYRTGKLELVDQGWFFFS 152

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             P +    +F  +    A          G    V+++HL+              S S  
Sbjct: 153 DTPDVIYSRTFDGSWPAFASWAAFRQRGGGDVFRVMNVHLEY------------RSASNR 200

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
              A+ + D +    +S  P V+AGDFN    +          +       RFPK   + 
Sbjct: 201 RLSAELIADRLRPVIDSGTPVVLAGDFNALAGWEVMESLEAAGL-------RFPKVPGAT 253

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + ++ L     ID+                     +   I+  G   +DH P+ +D 
Sbjct: 254 YHLDRGLHLLPAIDHIGHSPGLRG--------VGGPHVPQIRVDGVWPADHHPVVLDL 303


>gi|285016920|ref|YP_003374631.1| exodeoxyribonuclease III protein [Xanthomonas albilineans GPE PC73]
 gi|283472138|emb|CBA14645.1| probable exodeoxyribonuclease III protein [Xanthomonas albilineans]
          Length = 259

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 84/305 (27%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N+L+                     L+Q+      D+V +QE          
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLDTFAPDVVGIQET--------- 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +    +    +  +A+  +      Q                +
Sbjct: 36  -KLEDHKFPDAALAEAGYRSVFAGQKTYNGVAILSRTPLSDVQ------IGVPGLEDEQK 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           RA+   V      + ++++++ +   + S +  Y        +  + +  W+  + +   
Sbjct: 89  RAIAATV----GDLRIVNLYVVNGQDVGSDKYAYK------LRWLEAVHAWLAVELQRYP 138

Query: 204 PFVIAGDFNRKINYLGNNDDF----------------WKTIDPNDSLIRFPKEKDSRCNA 247
             V+ GDFN   +    +D                   + +        F +   +    
Sbjct: 139 RLVVLGDFNIAPDSRDVHDPLVWNDDHILTSTAERNALRKLFDLGLHDGF-RLHHADGGI 197

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID  ++ +   +              D      +R SDH P 
Sbjct: 198 FSWWDYRQAGFRRDLGLRIDLTLVSETLKEHTRGAGI-------DRTPRTWERPSDHAPA 250

Query: 299 SIDYD 303
            I  +
Sbjct: 251 WIALE 255


>gi|262401910|ref|ZP_06078475.1| extracellular nuclease-related protein [Vibrio sp. RC586]
 gi|262351882|gb|EEZ01013.1| extracellular nuclease-related protein [Vibrio sp. RC586]
          Length = 870

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 88/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R              +      LDADIV L E
Sbjct: 471 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANSLAEFEVQQAKIVNAIVRLDADIVGLME 530

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 531 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 590

Query: 117 RKKNVRVLQQSYPLLGAKD------------SFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 591 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVVEDGKNYQRDTLAPTFKVKGGNEKITVAVN 650

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           HLKS         +       +   L  Q                   +     VI GD 
Sbjct: 651 HLKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 710

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 711 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYLAGVEQFGDAGAEIKHSYGYLNAVAIKHP 770

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 771 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 830

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 831 RASDHDPAVLELN 843


>gi|261362088|gb|ACX71476.1| sphingomyelinase [Bacillus cereus]
          Length = 243

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 78/218 (35%), Gaps = 21/218 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223
           Q + ++D+I  +        +  GD N K     NN D
Sbjct: 198 QLKEIQDFIKNKNIPXDEYVLFGGDMNVKKVNAENNSD 235


>gi|108758427|ref|YP_630443.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108462307|gb|ABF87492.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 325

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 79/307 (25%), Gaps = 62/307 (20%)

Query: 7   LALVFFL---VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           L L + L        S  + V ++++N+   +                 D        + 
Sbjct: 70  LVLTWVLSLQASAAPSSPKPVTVMTYNVLYSAP--------------EEDVQKSLDVIEK 115

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
              DI+ L+E+      A+ F K     F           R         + +  +   +
Sbjct: 116 EAPDILCLRELTPR--FARAFRKRLGKQF--------PHVRLVPRKGTWGVGIASRYRLL 165

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT----YSP 179
             + +P    +          A+E  + +    + V  +HL +        +        
Sbjct: 166 RTEHFPQTPHRM--------PALEADIRLGEHWVKVACVHLMAPGARHQRADDLLTSMEK 217

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +  L  +QA+ L     + +    P ++ GD N   +                     P 
Sbjct: 218 NAVLRHRQAEALVRRYARWRG---PVLVLGDMNEGRSGKAMKAFASAGFQ---HACDGPD 271

Query: 240 EKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +      + L       +              SDH  
Sbjct: 272 AACGATWPGTASVLPSVVEIDHVL-----GRELRLSGAKVLRA----------GGSDHDA 316

Query: 298 ISIDYDF 304
           +    DF
Sbjct: 317 VRATLDF 323


>gi|301167386|emb|CBW26968.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 330

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 105/318 (33%), Gaps = 38/318 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTS---DYTLLRQYAKNLDADIVFLQEMGSYNA 79
              + S+N+  L           ++ +          L +   ++D+DI FL E+G  ++
Sbjct: 8   DFSICSFNVENLFLPPYSDEASYTLYKYEKSKDKVERLAKAILDIDSDIYFLCEVGGEDS 67

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRD---------------SNNDIHTAIAVRKKNVRVL 124
           +     +     ++ +    N  +                         +     +    
Sbjct: 68  LKNFVSEYLNDNYHYSLIPGNSERGIELAYLVKKGSPFSFKHFTHKRRPLNFNYPHEEKE 127

Query: 125 QQSYPLLGAKDSF-SRAGNRRAVELLVEINGKK---IWVLDIHLKSFCFLDSLENTYSPS 180
            +    +G K  + S   +R   EL +  + +    + +L +HLKS    D ++      
Sbjct: 128 NKYQMSMGKKRVYKSHLPSRDIAELRIFKDDETKPFLILLGVHLKSQLDKDGIDFGGKLR 187

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRF 237
            +   +Q     + + ++  + VP ++ GDFN    K          ++T D  D L   
Sbjct: 188 RAAEFKQLIETYNVLNKRYHNKVPILLLGDFNGKACKEETDIEFKTLYETTDLEDVLEVI 247

Query: 238 PKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291
            + K++R + +            +DY  + ++ +  +  +      Y  ++     +   
Sbjct: 248 EEPKEARISIHIFDKQGVDQGHQLDYIFIPKSLHSQINAKLSGLYNYKNEEGAPYPRPTS 307

Query: 292 -------LSDHCPISIDY 302
                   SDH PI    
Sbjct: 308 LYERYQLPSDHFPIVCTI 325


>gi|218262794|ref|ZP_03477152.1| hypothetical protein PRABACTJOHN_02832 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223126|gb|EEC95776.1| hypothetical protein PRABACTJOHN_02832 [Parabacteroides johnsonii
           DSM 18315]
          Length = 279

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 78/313 (24%), Gaps = 66/313 (21%)

Query: 1   MIRKYVLALVFFLVPC---------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M +   LA    ++           +      +R++S+NI      + ++          
Sbjct: 1   MKQAVWLAAALMMLLPLGKVYSKERSERENNTLRIMSYNIRNGRGMDDMT---------- 50

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D+    +    +  D+V +QE+ S    +            +    I ++     +   
Sbjct: 51  -DFRRTAEVINKVCPDVVAVQELDSVTGRSGGKDVLREIAGLTLMHHI-YAPAIDYDGGK 108

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             I +  K   +  +   L G      R   R  + +  E                C   
Sbjct: 109 YGIGMLSKEKPLGYRYLSLPG------REEARALLVVEFE-----------KYIYCCTHL 151

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           SL          + QQ             +  PF IAGD N   +               
Sbjct: 152 SLTEEDRMLSLPVIQQVAA---------SANKPFFIAGDMNAHPDSEFIRQLK------- 195

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                F    D         +    +DY                +        +      
Sbjct: 196 ---NDFVILTDMEKPTFPADKPDETLDYI---------AAYAKDTVAFTRISSLVWEEPA 243

Query: 292 LSDHCPISIDYDF 304
            SDH PI  D  F
Sbjct: 244 ASDHRPILTDIIF 256


>gi|145296587|ref|YP_001139408.1| hypothetical protein cgR_2495 [Corynebacterium glutamicum R]
 gi|140846507|dbj|BAF55506.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 928

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 99/342 (28%), Gaps = 71/342 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRT----------------------TSDYTLLR 58
           A +  + S+N+       G      S  R                           + + 
Sbjct: 486 AGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEEALEDQQSKIV 545

Query: 59  QYAKNLDADIVFLQEMGSYN------------------AVAKVFPKNTWCIFYSTERLIN 100
           +    LD D++ L+E+ +                    A+ +    + W    S E+L  
Sbjct: 546 EAINRLDVDVLGLEEIENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVESPEQLGT 605

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                    I  A    +  V+ + +S     A  + +           +  + K    +
Sbjct: 606 DEDY-----IRVAFIYDQTTVKPVGESRIFDDAAFTGTARQPLAQEFQPLNDSEKSFVGV 660

Query: 161 DIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKI 215
             H KS   +   +         + ++   QAQ L D +  + + +  P  I GD N   
Sbjct: 661 VNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFILGDTNSYA 720

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                      T+          +       + +       +D+ + ++ A K ++    
Sbjct: 721 KET-----AMTTLYGAGYTNIATEFDAG--YSYQFSGRIGTLDHALGNEAAMKHVVDAEV 773

Query: 276 SEILYNEDDIKSRGKRL--------------SDHCPISIDYD 303
            +I  +E       +RL              SDH PI + ++
Sbjct: 774 WDINADEAIAFEYSRRLNNTSDVFENNVFRSSDHDPIKVGFN 815


>gi|57157723|dbj|BAD83830.1| hypothetical protein [Corynebacterium glutamicum]
          Length = 934

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 99/342 (28%), Gaps = 71/342 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRT----------------------TSDYTLLR 58
           A +  + S+N+       G      S  R                           + + 
Sbjct: 486 AGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEAALEDQQSKIV 545

Query: 59  QYAKNLDADIVFLQEMGSYN------------------AVAKVFPKNTWCIFYSTERLIN 100
           +    LD D++ L+E+ +                    A+ +    + W    S E+L  
Sbjct: 546 EAINRLDVDVLGLEEIENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVESPEQLGT 605

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                    I  A    +  V+ + +S     A  + +           +  + K    +
Sbjct: 606 DEDY-----IRVAFIYDQTTVKPVGESRIFDDAAFTGTARQPLAQEFQPLNDSEKSFVGV 660

Query: 161 DIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKI 215
             H KS   +   +         + ++   QAQ L D +  + + +  P  I GD N   
Sbjct: 661 VNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFILGDTNSYA 720

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                      T+          +       + +       +D+ + ++ A K ++    
Sbjct: 721 KET-----AMTTLYGAGYTNIATEFDAG--YSYQFSGRIGTLDHALGNEAAMKHVVDAEV 773

Query: 276 SEILYNEDDIKSRGKRL--------------SDHCPISIDYD 303
            +I  +E       +RL              SDH PI + ++
Sbjct: 774 WDINADEAIAFEYSRRLNNTSDVFENNVFRSSDHDPIKVGFN 815


>gi|297824099|ref|XP_002879932.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325771|gb|EFH56191.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 550

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 87/314 (27%), Gaps = 70/314 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P      + V++++WN+N L     +  +               Q A+  + DI+ LQE 
Sbjct: 279 PPLPEGTKCVKVMTWNVNGLRALLKLESFSA------------LQLAQRENFDILCLQET 326

Query: 75  G-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                 V ++         +S            +   ++  A+  +   +  +    L  
Sbjct: 327 KLQVKDVEEIKNTLIDGYDHSFWSC------SVSKLGYSGTAIISRIKPLSVRYGTGLSG 380

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLK 192
            D       R      V       ++++ ++ +    L  L          LS   + L+
Sbjct: 381 SD--HDMEGRI-----VTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIKELE 433

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSLIRF 237
                      P V+ GD N     +   +      +                +   +  
Sbjct: 434 K--------SKPVVLTGDLNCAHEEIDIFNPAGNKRNAGFTIEERQSFGANFLDKGFVDT 485

Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
            +++            +           +DYF++ ++    +            D     
Sbjct: 486 FRKQHPGVVGYTYWGYRHGGRKTNRGWRLDYFLVSESIAANVH-----------DSYILP 534

Query: 289 GKRLSDHCPISIDY 302
               SDHCPI +  
Sbjct: 535 DINGSDHCPIGLIL 548


>gi|253568552|ref|ZP_04845963.1| exodeoxyribonuclease [Bacteroides sp. 1_1_6]
 gi|251842625|gb|EES70705.1| exodeoxyribonuclease [Bacteroides sp. 1_1_6]
          Length = 254

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N+N L       L                ++    + DI+ LQE  +      A
Sbjct: 2   MKIITYNVNGLRAAASKGLP---------------EWLVQENPDILCLQETKLQPDQYPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +VF    +  +  + +   +          + +A+  K        +   G         
Sbjct: 47  EVFEALGYKAYLYSAQKKGY----------SGVAILTKQEP----DHVEYGMGIEAYDNE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++  S    D  +       +      +  + ++T+ +++
Sbjct: 93  GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVTELRKT 140

Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                         +   + +             + + 
Sbjct: 141 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRLLYPEKQE 200

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + R           IDY +  +     L   S      +           SDHCP+
Sbjct: 201 YTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSASILNDAVH-----------SDHCPM 249

Query: 299 SIDYD 303
           +++ +
Sbjct: 250 ALEIE 254


>gi|255590873|ref|XP_002535386.1| conserved hypothetical protein [Ricinus communis]
 gi|223523279|gb|EEF26997.1| conserved hypothetical protein [Ricinus communis]
          Length = 249

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 75/270 (27%), Gaps = 46/270 (17%)

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNND 109
            L+Q     DAD+VFLQE+   + +           +  W      E     S+      
Sbjct: 2   ALKQAIGLFDADVVFLQEVQGKHDLKAAKYGAEHLGQKHWPAAAQHEYFAGESRHLHAAY 61

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKD---SFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
              A+     +   L  ++P+    +   S      R  +  +++     +    +HL  
Sbjct: 62  GMNAVYDHGHHGNALLSAFPIASQANRDVSDHAYEQRGILHCVLDTPAGPVHCYVVHLGL 121

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--YLGNNDDF 224
           F                  +Q Q L   + +   +  P VIAGDFN   N       +  
Sbjct: 122 FEGS-------------RRRQTQALIAAVKESAPNGEPVVIAGDFNDWRNTLSAELYNAL 168

Query: 225 -----WKTIDPNDSL------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                +  I+ +++           K                 +D   +           
Sbjct: 169 GVVEAFDEIEGSNTALGEIMRKLRRKSSIVPARTFPAALPFFRLDRIYVRG--------- 219

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            F               +LSDH PI     
Sbjct: 220 -FKVDTAEVMHGS-LWAKLSDHAPIVASLT 247


>gi|153214876|ref|ZP_01949674.1| hypothetical protein A55_2851 [Vibrio cholerae 1587]
 gi|124115035|gb|EAY33855.1| hypothetical protein A55_2851 [Vibrio cholerae 1587]
          Length = 869

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVIDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAVKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|295698348|ref|YP_003603003.1| exodeoxyribonuclease III [Candidatus Riesia pediculicola USDA]
 gi|291157399|gb|ADD79844.1| exodeoxyribonuclease III [Candidatus Riesia pediculicola USDA]
          Length = 267

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 80/307 (26%), Gaps = 74/307 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN                   + +  L +  K  D DI+ LQE    N++   
Sbjct: 1   MKIVSFNING----------------IRAHFHQLYEIVKKYDPDIIGLQETKVENSL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   F        +    +    H  +A+  K               +   R    
Sbjct: 42  --------FPKDGFDHKYHIYLNGRKSHHGVALFSKKKLFDINIRFFKENSNEEHR---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +     +I +++I+       ++            +     L  ++ +K     
Sbjct: 90  -VISANIFFQETEIQIINIYCPQGENRNNKIKFNKKKNFYKN-----LIKYVQKKIFENK 143

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                                + K +     +  + K   
Sbjct: 144 NIILMGDMNISPEDQDIGIDPYHQNRWINLGKCGFLPEERIWMKKLKSFGLIDTYRKRNF 203

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            + N       +           ID+ ++ +  +               D      KR S
Sbjct: 204 FKKNKFSWFDYRSNGFLNKVGLRIDFILVSKKLFDSCRSSGI-------DYSIRSMKRPS 256

Query: 294 DHCPISI 300
           DH PI  
Sbjct: 257 DHAPIWA 263


>gi|269987019|gb|EEZ93294.1| exodeoxyribonuclease III [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 252

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 84/304 (27%), Gaps = 76/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N L              R+ +    +++   +   D++ LQE      + K+
Sbjct: 1   MKILSWNVNGL--------------RSVARKNEIQKIINSQIYDVILLQETK-IEEINKL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N +  +             +    ++ +    K   +      + G          R
Sbjct: 46  IETNGYVYYI---------MHSTVKKGYSGVITFCKETPINV----IYGIGHEKYDNEGR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ I  K  ++++ +  +     S  +        + +  + L+           
Sbjct: 93  -----VITIELKDYFIVNSYFPNSRRDLSRLDFKKDFNEKILEFLEKLRKR--------K 139

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
           P VI GDFN     L          +                   I   +  +       
Sbjct: 140 PVVIGGDFNVAHTDLDIARPKQNDGNAGFTREERAFVDKFIEKGYIDTFRLFNKEGGNYS 199

Query: 250 NLRN----------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++       +                 + +  SDH P+ 
Sbjct: 200 WWTYLYKSAKANNIAWRIDYFLVSSELKNKVKAAGII-----------KKQEGSDHAPVF 248

Query: 300 IDYD 303
           ++ D
Sbjct: 249 VEVD 252


>gi|229524601|ref|ZP_04414006.1| extracellular nuclease-related protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229338182|gb|EEO03199.1| extracellular nuclease-related protein [Vibrio cholerae bv.
           albensis VL426]
          Length = 869

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 88/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V + Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVTLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|78049826|ref|YP_366001.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038256|emb|CAJ26001.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 263

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+      D+V +QE  +  +    
Sbjct: 5   MKIASWNVNSLN----------------VRLPHLQQWLAAFAPDVVGIQETKLEDHKFPD 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +   +                 +  +A+  ++  V  Q               
Sbjct: 49  AALAALGYRSVFC------------GQKTYNGVAILSRSPAVDVQ-----MGIPGLDDVQ 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +      DWI Q+ + 
Sbjct: 92  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQR 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246
               V+ GDFN   +    +D         +   D            L    +  +    
Sbjct: 141 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAE 200

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        ++          D      +R SDH P
Sbjct: 201 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 253

Query: 298 ISIDY 302
             +  
Sbjct: 254 AWVRL 258


>gi|15823704|dbj|BAB68563.1| DNase I [Elaphe climacophora]
 gi|18147011|dbj|BAB82990.1| deoxyribonuclease I [Elaphe quadrivirgata]
          Length = 282

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 97/309 (31%), Gaps = 38/309 (12%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++  +LAL+        +++  +R+ ++NI             +      +  + + +  
Sbjct: 1   MKTLLLALLGVASLLQLTLS--LRIGAFNIRAFG---------DKKLSNQTISSSIVRIL 49

Query: 62  KNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                D+V +QE+   +  AV K+    +         LI+     ++         R+ 
Sbjct: 50  TTY--DLVLIQEVRDADLSAVKKLMQLVSGASPDPFGYLISKPLGHNSYKEQYLFVYRQD 107

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYS 178
            V  ++  Y   G +   +   +R    +   +    +  ++ + L +            
Sbjct: 108 RVSPVESYYYDDGCEPCGNGTFSREPFIVKFAVPQAAVEELVLVPLHA------------ 155

Query: 179 PSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            +      +   L D     K+   +   ++ GDFN   NY+   D     +  +     
Sbjct: 156 -APEAAVTEIDSLYDVYQDVKDRWGVTDALLLGDFNADCNYVQAEDWPSIRLRSSKDFQW 214

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKS--RGKRLS 293
              +       N         D  V +     + ++  +     + +    S      +S
Sbjct: 215 LIPDTADTTVTNTICAY----DRIVAVGSKLRESILPATAKVDNFQKTLKLSSKDALAVS 270

Query: 294 DHCPISIDY 302
           DH P+ +  
Sbjct: 271 DHFPVEVTL 279


>gi|254477073|ref|ZP_05090459.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp.
           R11]
 gi|214031316|gb|EEB72151.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp.
           R11]
          Length = 242

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 79/282 (28%), Gaps = 55/282 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++RL ++NI            K+             +  +   AD+V LQE        
Sbjct: 12  GRLRLATYNIQ-----------KSVGMDLRRRPRRTLKVIEGTGADLVLLQEADKR-LPP 59

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      + +  +   +++     S      A+  R   +R++ Q +  L          
Sbjct: 60  RPAALPHFVLDEAGWHIVDLGGAGSLGWHGNAVIWRGDALRLVDQGHIPLPG------LE 113

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R AV    E     + V+  HL                     +Q   L   I    E 
Sbjct: 114 PRGAVWARFETALGPLRVVGAHLGLTT-------------RARHEQVHHLARHIA--SEP 158

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            +P V AGDFN       +       I P    +           +   LR    +D   
Sbjct: 159 DLPTVCAGDFN-----EWSRQPVLDHIAPQLRFV-------PPKASFPALRPIGALDRIA 206

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +              + +           SDH P+  D +
Sbjct: 207 VSRGLRV----------VESGVYRARPAHVASDHLPVWADLE 238


>gi|329768092|ref|ZP_08259601.1| exodeoxyribonuclease III [Gemella haemolysans M341]
 gi|328838247|gb|EGF87859.1| exodeoxyribonuclease III [Gemella haemolysans M341]
          Length = 254

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+N+N L    G +  ++                K LDAD   LQE     A    
Sbjct: 1   MKCISFNVNGLRAIVGKNFEED---------------FKKLDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N +  +++           +    ++  A+  K+  +       +   D+  R    
Sbjct: 45  LQFNGYYSYFN----------YAERKGYSGTAIYTKHEPINVTYGIGIEEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   K + + ++  +                        L            
Sbjct: 91  -----VITLEYDKFFFITVYTPNSGSELKRLEYRMSWEEDFKNYLLELNK--------TK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N     +                   + +  +     +  F         A 
Sbjct: 138 GIVVCGDLNVAHTEIDLKNPKSNTKNAGFTQEEREKFTKLLDAGFIDTFRYYNPDLTGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++  K+L   +    ++            SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSRDLEKYLESAAIHNEIF-----------GSDHCPVE 246

Query: 300 IDY 302
           +  
Sbjct: 247 LVL 249


>gi|225175437|ref|ZP_03729432.1| exodeoxyribonuclease III Xth [Dethiobacter alkaliphilus AHT 1]
 gi|225169189|gb|EEG77988.1| exodeoxyribonuclease III Xth [Dethiobacter alkaliphilus AHT 1]
          Length = 260

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 81/303 (26%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N            +   R       L +  +  D D++ LQE+   +     
Sbjct: 1   MKICTFNVN------------SVRAREELLLKWLEK--RGTDIDVLCLQEIKVTDD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +         +  +AV  K          + G  D       R
Sbjct: 43  ------KFPRQAFESLGYQCTVFGQQRYNGVAVCSK----EGAQQVVTGFGDENWDQQKR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +     ++ V++++        S +  Y           ++  +++ +      
Sbjct: 93  -IMHCRI----GEVTVVNVYAPHGDLRGSEKYIYKQK------WYRYFLEYLQRNFSPSD 141

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+ GD N  +                            +D            D++   
Sbjct: 142 PLVVVGDLNVALEDLDVHDPKLLEDTVCTMPEERRWLQDVLDWGLVDSFRHLNPDAQSFT 201

Query: 248 NK-------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + IDY +  +   + + +               R  + SDH P+ +
Sbjct: 202 WWDYVGGAIWQDKGMRIDYILCSKPLAEKMAEVEVDLWPRR-----RRTPKPSDHAPVIL 256

Query: 301 DYD 303
             +
Sbjct: 257 SLN 259


>gi|223985143|ref|ZP_03635238.1| hypothetical protein HOLDEFILI_02544 [Holdemania filiformis DSM
           12042]
 gi|223962889|gb|EEF67306.1| hypothetical protein HOLDEFILI_02544 [Holdemania filiformis DSM
           12042]
          Length = 252

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 77/304 (25%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +    DADI  LQE          
Sbjct: 1   MKLISWNVNGLRACIQKGFM---------------DFFNEQDADIFALQETK-LQPHQIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++ +     +S                                +       R
Sbjct: 45  LELPGYHQYWHSAERKGYSGTAVFTKQKP------------LSVRYDFDEAEGEHPKEGR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ + +  ++ +     +  +        +++    L +          
Sbjct: 93  -----VITLEFEQFYFVTAYVPNSKEELARLDYRMQWEDAMARHLAKLNE--------TK 139

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN----------DSLIRFPKEKDSRCNA----NK 249
           P V  GD N  +  +   +      +P           D L     +             
Sbjct: 140 PVVYTGDLNVAVEEIDLKNPKTNHFNPGFSDQERQKMRDLLSLGFADTFRTLYPEKVEYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ Q     +            D +       SDHCP+ +
Sbjct: 200 WWSYRFNSRAKNVGWRIDYFIVSQRLMNQVK-----------DSVIYGDILGSDHCPVGV 248

Query: 301 DYDF 304
           + +F
Sbjct: 249 EIEF 252


>gi|110633439|ref|YP_673647.1| exodeoxyribonuclease III [Mesorhizobium sp. BNC1]
 gi|110284423|gb|ABG62482.1| Exodeoxyribonuclease III [Chelativorans sp. BNC1]
          Length = 259

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 83/304 (27%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                     L ++      D+V LQE+ + +     
Sbjct: 1   MKIATFNINNIN----------------KRLPNLLEWLHLSKPDVVCLQELKATDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S      +            +A+  +    +     L G     +    R
Sbjct: 42  -------FPKSAIESFGYRAVWKGQKSWNGVAILSRVGEPVLTRTRLPGDA---ADTQAR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + + +  I+  +       +  Y  +        + L+   T  +++  
Sbjct: 92  YIEAAV-----RGVLIASIYAPNGNPQPGPKFDYKLA------WLERLRKHATALRKTGA 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN     +                     ++ +               +    
Sbjct: 141 PIVLAGDFNVAPTDIDIYPTKSWGDNALIQPESRAAFRRLLGRSWTDGIRLLHPEQ-RIY 199

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                K           +D+ ++ +N    +++          D      +  SDH P  
Sbjct: 200 TFWDYKRLRWQRDAGLRLDHLLLSENLRGAIVKAGV-------DRDVRGREGASDHAPAW 252

Query: 300 IDYD 303
           I+ +
Sbjct: 253 IELN 256


>gi|323483337|ref|ZP_08088727.1| hypothetical protein HMPREF9474_00476 [Clostridium symbiosum
           WAL-14163]
 gi|323691163|ref|ZP_08105441.1| exodeoxyribonuclease III [Clostridium symbiosum WAL-14673]
 gi|323403435|gb|EGA95743.1| hypothetical protein HMPREF9474_00476 [Clostridium symbiosum
           WAL-14163]
 gi|323504773|gb|EGB20557.1| exodeoxyribonuclease III [Clostridium symbiosum WAL-14673]
          Length = 251

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 73/302 (24%), Gaps = 78/302 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L    G                      K LDADI  +QE           
Sbjct: 3   KLISWNVNGLRACVGKGF---------------LDIFKELDADIFCIQE-SKLQGGQIDL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
             + +  ++S      +          +  A+  K   +       + A D   R     
Sbjct: 47  ELDGYYQYWSYAEKKGY----------SGTALFTKEEPLSVTYGLGIEAHDHEGR----- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++       +V+  +  +     +                + L++          P
Sbjct: 92  ----VITAEFPDYYVITCYTPNSQDGLARLPYRMQWEDDFLSYLKKLEEH--------KP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +  GD N                           +  +  +  +  +      +     
Sbjct: 140 VIFCGDLNVAHREIDLKNPKSNRKNAGFTDEERGKFTQLLESGFIDTYRHFYPDQEGIYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + +     L        +             SDHCP+ +
Sbjct: 200 WWSYRFKAREKNAGWRIDYFCVSKALEDRLESAMIHTEI-----------MGSDHCPVEL 248

Query: 301 DY 302
             
Sbjct: 249 VI 250


>gi|256419936|ref|YP_003120589.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588]
 gi|256034844|gb|ACU58388.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588]
          Length = 254

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 84/304 (27%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS+N+N L                        ++ K   ADI+ LQE+    A    
Sbjct: 1   MRIVSYNVNGLRSAMNKGF---------------TEWLKTDPADIICLQEI---KAHKDN 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +                     ++ +AV  K        +   G     S A  R
Sbjct: 43  VDYKQFEELGFEHYWYPAQ-----KKGYSGVAVLTKITP----DHVQYGNGFMQSDAEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ ++   I +++ ++ S    D  +       +   Q  +    ++ Q K +  
Sbjct: 94  -----VIRLDFGDITLINTYMPSGTSGDERQ-------TYKYQWLEEFYGYVDQLKATRP 141

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD+N                   +L     +   +  N  +  F        +  
Sbjct: 142 NLIICGDYNICHKPIDIHDPVGNKKSSGFLPEERAWLDKLFSNGFVDTFRHYHPEP-HQY 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY  +       L                    + SDHCPI 
Sbjct: 201 SWWSVRTNARANNKGWRIDYISVTAPLQPKLKDALIW-----------PDVKHSDHCPIY 249

Query: 300 IDYD 303
           +  +
Sbjct: 250 LQLE 253


>gi|260589662|ref|ZP_05855575.1| exodeoxyribonuclease III [Blautia hansenii DSM 20583]
 gi|331083093|ref|ZP_08332210.1| exodeoxyribonuclease [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260539902|gb|EEX20471.1| exodeoxyribonuclease III [Blautia hansenii DSM 20583]
 gi|330405095|gb|EGG84632.1| exodeoxyribonuclease [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 251

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                        ++ +  DAD   +QE          
Sbjct: 1   MKFISWNVNGLRACVKKGF---------------TEFFEQTDADFFCIQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  +++           +    ++  A+  K   +  Q    +   D   R    
Sbjct: 45  FEPEGYFCYWN----------YAVKKGYSGTAIFAKKEPLSVQYGIGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     +  +             Q L        +   
Sbjct: 91  -----VITLEYENFYMVTVYTPNSQSELARLSYRMQWEDDFRAYLQQL--------DEKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + + T         F      +    
Sbjct: 138 PVIMCGDLNVAHQEIDLKNPKTNRHNAGFTDEEREKFTTFLDAGFTDTFRYFYPDKTEIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF   +   + L+  S    ++            SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFCTSKRLDEKLLSASIHTDIF-----------GSDHCPVE 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 VQIE 250


>gi|154490204|ref|ZP_02030465.1| hypothetical protein PARMER_00436 [Parabacteroides merdae ATCC
           43184]
 gi|154089096|gb|EDN88140.1| hypothetical protein PARMER_00436 [Parabacteroides merdae ATCC
           43184]
          Length = 253

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 88/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N+N L    G  L                ++      D++ LQE  +      A
Sbjct: 1   MKIITYNVNGLRAAVGKGLP---------------EWLAQEQPDVLCLQETKLQPEQYPA 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  +  + +   +          + +A+  +        +   G         
Sbjct: 46  EAFEALGYKAWLFSAQKKGY----------SGVAILSRREP----DHVEYGMGIEKYDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++  S    D  +       +   +  +  ++++ + ++S
Sbjct: 92  GRF-----IRADFGDLSVISVYHPSGTSGDERQ-------AFKMEWLEDFQNYVVELQKS 139

Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                         +   + +D            D + 
Sbjct: 140 RPKLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLDAGYIDTFRLLNPDKQE 199

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + R           IDY ++ +     + +        +           SDHCP 
Sbjct: 200 YTWWSYRFSARAKNKGWRIDYCMVSEPMKAQVEKAYILNEAVH-----------SDHCPA 248

Query: 299 SIDYD 303
            I+  
Sbjct: 249 VIEVS 253


>gi|288554501|ref|YP_003426436.1| endonuclease/exonuclease/phosphatase [Bacillus pseudofirmus OF4]
 gi|288545661|gb|ADC49544.1| endonuclease/exonuclease/phosphatase [Bacillus pseudofirmus OF4]
          Length = 265

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 82/298 (27%), Gaps = 52/298 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79
            ++L++ N++               +        L +       D++ LQE+      + 
Sbjct: 2   PLKLLTLNVH-----------AWQEENQEKKLDHLVKTIFEEQYDVIALQEVSQHRDQDV 50

Query: 80  VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           V      + +             +   ++              IA+  ++  +    + +
Sbjct: 51  VEGQIKADNYGYILQKKLKELGSAPYEMVWAPCHYGYEVFEEGIALLTRHPIIESTDFYV 110

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             +++  +   +R  V  L+EI+ K I     HL    + D+ E            Q   
Sbjct: 111 TKSREMKNWK-SRNIVGALIEIDNKPIHFYSCHL--GWWEDTEEPAR--------GQMDA 159

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L + I     +     + GDFN   +      D+       D+     ++        K 
Sbjct: 160 LLEQI----PADGRVFLMGDFNNHADMRNEGYDYLIQNGFYDTFTLADEKDSGVTVEGKI 215

Query: 251 LRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      ID  + +Q           +               +SDH  +     
Sbjct: 216 AGWDQNKRGIRIDLILTNQK---------VNVFSSKVIFNGRNRDIVSDHFGVEAVIT 264


>gi|261362084|gb|ACX71474.1| sphingomyelinase [Bacillus cereus]
          Length = 238

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 79/218 (36%), Gaps = 21/218 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N   + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTD 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223
           Q + ++D+I  +   +    +I GD N       N  D
Sbjct: 198 QLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKSD 235


>gi|284989389|ref|YP_003407943.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
 gi|284062634|gb|ADB73572.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
          Length = 257

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 74/304 (24%), Gaps = 79/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +R+ ++NI                     D   L    K+LDAD++ LQE+         
Sbjct: 1   MRIATFNILHGRSPVDD----------RVDVERLATAVKDLDADVLGLQEVDRDQPRSLG 50

Query: 79  ------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI----HTAIAVRKKNVRVLQQSY 128
                 A   +   ++  +              + ++        IA+  +   V  +  
Sbjct: 51  SDLTAVAAEAMGAVDSQFVAALHGTPGGTWMAATGDEQPGSATYGIALLSRYPVVSWRVV 110

Query: 129 PLLGAKDSFSRAG------------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            L   +                    R AV  +++    +  V + HL            
Sbjct: 111 RLPALRSRVPVWFRGAPRPKLVGDEPRVAVAAVLDGPSGQFTVCNTHLSFVPGWG----- 165

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                      A  L   +     +  P V+ GD N +                 + +  
Sbjct: 166 -----------ALQLSKLVRSLTGTREPLVLMGDLNMQAGQA-------------ERVSG 201

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                 +             +D+ +           ES                 LSDH 
Sbjct: 202 LRPLAPATTPTFPVDEPARQLDHVLARGPIAATGPAESVR-------------LPLSDHR 248

Query: 297 PISI 300
            + +
Sbjct: 249 ALVV 252


>gi|229084175|ref|ZP_04216463.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
 gi|228699133|gb|EEL51830.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
          Length = 190

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 15/184 (8%)

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----PSC 181
           ++ P    +D+      R+ +       G+ I V+  HL S     +           S 
Sbjct: 11  ETNPTRIGQDNPLFESTRKPLAAEFTFQGQNIVVVSNHLNSKLGDATPFGKIQPLVFKSE 70

Query: 182 SLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
               Q AQ +  ++   QKK++  P V+ GD N             + +  +        
Sbjct: 71  EKRIQLAQEVNSFVKGIQKKDANAPVVVVGDMNDFEFSKP-----LQALKGDVMKDMLET 125

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                     +  N   +D+ ++  N        +  + ++   +I     R+SDH P+ 
Sbjct: 126 VSKDNRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGRVSDHDPVL 181

Query: 300 IDYD 303
              D
Sbjct: 182 AQID 185


>gi|147674583|ref|YP_001218114.1| hypothetical protein VC0395_A2198 [Vibrio cholerae O395]
 gi|262170130|ref|ZP_06037819.1| extracellular nuclease-related protein [Vibrio cholerae RC27]
 gi|146316466|gb|ABQ21005.1| hypothetical protein VC0395_A2198 [Vibrio cholerae O395]
 gi|227014509|gb|ACP10719.1| extracellular nuclease-related protein [Vibrio cholerae O395]
 gi|262021538|gb|EEY40250.1| extracellular nuclease-related protein [Vibrio cholerae RC27]
          Length = 869

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVEIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVINANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|299782782|gb|ADJ40780.1| Exodeoxyribonuclease [Lactobacillus fermentum CECT 5716]
          Length = 279

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 86/305 (28%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWNI++++     +  +    R       + +  K    D++ +QE     +    
Sbjct: 1   MRFISWNIDSINAALTGTSARAEETR------AVLEKIKAAAPDVIAIQETKLSKSGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      ++   ++  S  +     +       K     + +YP +GA +   + G  
Sbjct: 55  KHQGVLAELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDKEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  ++ +++  +                   +    L        +   
Sbjct: 114 -----IITLEFENFYLTEVYTPNSGTGLKRLAERQEWDDRYREYLTEL--------DRQK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                         + +  +        F         A 
Sbjct: 161 PVIASGDFNVAHEEIDLAHPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       ++  +  +                DH PI
Sbjct: 221 SWWAQRAVTSKVNNSGWRIDYWLVSDRLADQVVSSTMIDSGERR-----------DHAPI 269

Query: 299 SIDYD 303
            +D +
Sbjct: 270 QLDIN 274


>gi|169347307|ref|ZP_02866245.1| hypothetical protein CLOSPI_00022 [Clostridium spiroforme DSM 1552]
 gi|169293924|gb|EDS76057.1| hypothetical protein CLOSPI_00022 [Clostridium spiroforme DSM 1552]
          Length = 252

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 77/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +        +                  K+ DADI  +QE        ++
Sbjct: 1   MKLISWNVNGIRACINKGFY---------------DILKDFDADIFCIQETKMQEGQIEI 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    S                ++   V  K   +       +   D   R    
Sbjct: 46  EDHGYYLYMNSAV-----------KKGYSGTLVFTKVKPLSYSYGINIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   K ++++ +  +                      + L++          
Sbjct: 91  -----VITLEYNKFYLVNCYTPNSQDGLKRLEYRQVWEDDFLAYLKSLEE--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                              +  +  +  F         A 
Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTQLLNHGFIDTFRYLYPDLQGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++     + +            D    +    SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSDCLKEKIK-----------DAYIFKDIMGSDHCPVG 246

Query: 300 IDYD 303
           +D +
Sbjct: 247 LDIE 250


>gi|260889134|ref|ZP_05900397.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
 gi|260861194|gb|EEX75694.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
          Length = 240

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 71/284 (25%), Gaps = 48/284 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           + R++++NI      +G                 L +  K    D V LQE+      + 
Sbjct: 2   EFRIMTYNIYGARLADG---------------KKLAKSIKKYKPDFVALQEVDKNTKRSN 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                               K    +     IA   K        + L            
Sbjct: 47  FRDVTQDFALELGYNYYYFQKAMDFDKGEFGIAFVSKYDVKNIYVHELPSVG-----KEK 101

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R+ +   +     K I V++ HL     + S              Q   L   I      
Sbjct: 102 RQVLAAQISSKYKKHILVINTHLDYEPAVKS-------------TQIDDLMTVIDYF--K 146

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
                + GDFN                D          + +      +       IDY +
Sbjct: 147 GDIKFLCGDFNLLPTTEYYRKIAENWNDTYFEGKDLENKSNLENRNLET----QRIDYIM 202

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDYD 303
             +       Q       +  +D      +LSDH P  + ++ +
Sbjct: 203 AKKGENYRTKQS------FFINDDSQEWTKLSDHLPYMVVLEIE 240


>gi|206602794|gb|EDZ39275.1| Exodeoxyribonuclease III [Leptospirillum sp. Group II '5-way CG']
          Length = 265

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 87/303 (28%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +  +WN+N+L                      +  +     AD+V LQE    +A    
Sbjct: 11  FKTTTWNVNSL----------------KVRLPQVLDWLVREKADVVCLQETKLPDA---- 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   R I +    S    +  +A+       L ++       D       R
Sbjct: 51  ------QFPFQAFREIGYDAVWSGQPTYNGVAILSNTPIELTEASMDDHPDDH------R 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +    + + ++++++ +   LDS + TY        +    L  +I + +E+  
Sbjct: 99  RFLSARI----RGVRIVNVYVPNGQDLDSPKFTYK------LEWLNRLTRYIEKVREARE 148

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPN------DSLIRFPKEK 241
           P ++ GDFN                   +                            +  
Sbjct: 149 PVLLMGDFNIVPGDLDTWDPEGFKDQIFHSPPERKALGNIFQAGFSDLYRTLYPDRQEFS 208

Query: 242 DSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                     RN+   ID  +      +   +          D    + +R SDH P++ 
Sbjct: 209 WWDYRMGSFHRNRGLRIDLILSTPPLSEQCREVFI-------DREARKAERPSDHVPVTA 261

Query: 301 DYD 303
            + 
Sbjct: 262 LFS 264


>gi|76818411|ref|YP_335567.1| putative endonuclease/exonuclease/phosphatase family protein
            [Burkholderia pseudomallei 1710b]
 gi|76582884|gb|ABA52358.1| putative Endonuclease/Exonuclease/phosphatase family protein
            [Burkholderia pseudomallei 1710b]
          Length = 1153

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 56/285 (19%)

Query: 18   ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                +++R+ ++NI+                 T S    +      L AD++ LQE+   
Sbjct: 862  QPRTRELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPLG 910

Query: 78   NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             A           +   T                   AV  +      +   L     SF
Sbjct: 911  GARGADV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SF 962

Query: 138  SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                 R A++  +E     + V+  HL               S +  S Q   L   +  
Sbjct: 963  GNREPRGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAA 1006

Query: 198  KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 +P ++ GD N         + F +       +  F +    R            +
Sbjct: 1007 FDTRALPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--L 1055

Query: 258  DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            D   +     ++L+  +                   DH P+    
Sbjct: 1056 DRIWVHPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 1090


>gi|298207997|ref|YP_003716176.1| hypothetical protein CA2559_07085 [Croceibacter atlanticus
           HTCC2559]
 gi|83850638|gb|EAP88506.1| hypothetical protein CA2559_07085 [Croceibacter atlanticus
           HTCC2559]
          Length = 340

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/323 (12%), Positives = 92/323 (28%), Gaps = 69/323 (21%)

Query: 2   IRKYVLALVFFLVPCTASVA-------------QKVRLVSWNINTLSEQEGVSLWKNSVK 48
            R+  ++L+  L+      +             +   ++S+N+ + +    +     S  
Sbjct: 65  RRQLFMSLLILLIGFANLSSFYKFSESKKVGDEEHFSVMSYNVKSFNRYNWIDAENIS-- 122

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                   +  +      DI+ +QE  S +  +K+     +    +             N
Sbjct: 123 ------DSIAHFIAQEQPDILAVQEYFSES--SKIDRAFKYKYIKTKT-----------N 163

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
           +     A   +   +   S     A ++        A+ + V      +   + HL+S  
Sbjct: 164 NSRFGQAFFSEYPIINSGSVDFESAGNN--------AIFIDVVYKKDTLRFYNAHLESLR 215

Query: 169 FLDSLENTYSPSCSLL--------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
              ++++        L          Q   ++      + S    +I  D N        
Sbjct: 216 LKPNVKDLQEEGSERLLGRVGGTFKVQQDQMEQLKAHIETSPYKVIICSDLNNSAFSY-- 273

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
               ++ I  N     F    +    +       + ID+ +              S+   
Sbjct: 274 ---VYRAIKGNTYKDAFKLAGNGFGKSFDLDFFPLRIDFIL--------------SDKTI 316

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
                 +  K+ SDH PI  D+ 
Sbjct: 317 PIKGFTTYTKKFSDHFPIKADFS 339


>gi|53734141|gb|AAH83404.1| Ttrap protein [Danio rerio]
          Length = 379

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 48/294 (16%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +     K+ ++SWN++ L         +            L  Y      D+VFLQE+  
Sbjct: 126 SEVEDSKLSIISWNVDGLDTLNLADRARG-----------LCSYLALYTPDVVFLQEL-- 172

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                       +  +     +       S++   T I +RK  V+ L+           
Sbjct: 173 ---------IPAYVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTT-- 221

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   V  +G+K++++  HL+S                  ++Q + +   I 
Sbjct: 222 ---QMMRNLLIAQVTFSGQKLYLMTSHLESC----------KNQSQERTKQLRVVLQKIK 268

Query: 197 QKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +        + AGD N +               D W+ +   +   R+  +  +  N   
Sbjct: 269 E-APEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQE-HCRYTWDTKANSNKTV 326

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++   D   +           +   +     +    G+  SDH  I   ++
Sbjct: 327 PYVSRCRFDRIFLRSAKTGP--PVTPDHMALIGMEKLDCGRYTSDHWGIYCTFN 378


>gi|29346040|ref|NP_809543.1| exodeoxyribonuclease [Bacteroides thetaiotaomicron VPI-5482]
 gi|29337934|gb|AAO75737.1| exodeoxyribonuclease [Bacteroides thetaiotaomicron VPI-5482]
          Length = 253

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N+N L       L                ++    + DI+ LQE  +      A
Sbjct: 1   MKIITYNVNGLRAAASKGLP---------------EWLVQENPDILCLQETKLQPDQYPA 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +VF    +  +  + +   +          + +A+  K        +   G         
Sbjct: 46  EVFEALGYKAYLYSAQKKGY----------SGVAILTKQEP----DHVEYGMGIEAYDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++  S    D  +       +      +  + ++T+ +++
Sbjct: 92  GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVTELRKT 139

Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                         +   + +             + + 
Sbjct: 140 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRLLYPEKQE 199

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + R           IDY +  +     L   S      +           SDHCP+
Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSASILNDAVH-----------SDHCPM 248

Query: 299 SIDYD 303
           +++ +
Sbjct: 249 ALEIE 253


>gi|21244888|ref|NP_644470.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110598|gb|AAM39006.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 259

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 84/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+      D+V +QE  +  +    
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLAAFAPDVVGIQETKLEDHKFPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +   +                 +  +A+  ++  +  Q               
Sbjct: 45  AALAALGYRSVFC------------GQKTYNGVAILSRSPAIDVQ-----MGIPGLDDVQ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +      DWI Q+ + 
Sbjct: 88  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQR 136

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246
               V+ GDFN   +    +D         +   D            L    +  +   +
Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAD 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        ++          D      +R SDH P
Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249

Query: 298 ISIDY 302
             +  
Sbjct: 250 AWVRL 254


>gi|24214114|ref|NP_711595.1| hypothetical protein LA_1413 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24195001|gb|AAN48613.1| hypothetical protein LA_1413 [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 360

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 92/321 (28%), Gaps = 66/321 (20%)

Query: 23  KVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           K++++ WN+  L+                    S +        +  Y  + D D++  Q
Sbjct: 51  KIKVLVWNVQYLAGKKRIFWYDLPNGDGPDTGPSKEEIEETLKKVADYIHSEDPDVILFQ 110

Query: 73  EMGS-------YNAVAKVFPKNTWCI------FYSTERLINHSKRDSNNDIHTAIAVRKK 119
           E+          + + ++  +           FY     + H K   +  +  A   + K
Sbjct: 111 ELHDGAENTFREDQLERILSRIGSEYVCRSEAFYWKSNFVPHPKILGSVGMKLATISKYK 170

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177
               ++ S PL+ A    ++    R  ++  + I  G K  VL+ HL +F       +  
Sbjct: 171 ISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIEGGDKFTVLNTHLDAFSQGTDTMHR- 229

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------------NYLGNN 221
                    Q + +   + +   +   +V+ GDFN                   +     
Sbjct: 230 ---------QVETITGLLKELDLAGHYWVLGGDFNLIPPGFDRKSMHPNGAFFYSDEQEI 280

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFS 276
              +   +           +  +                 IDY     N  +      + 
Sbjct: 281 KPLFDRWNSAVPFKILNGPEKEKYYTYYPNDPAIGKPDRTIDYIFYSSNLKQ----SGYK 336

Query: 277 EILYNEDDIKSRGKRLSDHCP 297
                  D K     +SDH P
Sbjct: 337 V------DQKDILWTISDHFP 351


>gi|46906561|ref|YP_012950.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47091460|ref|ZP_00229257.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes str. 4b H7858]
 gi|46879826|gb|AAT03127.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47020137|gb|EAL10873.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes str. 4b H7858]
 gi|328467778|gb|EGF38824.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes 1816]
          Length = 257

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 74/282 (26%), Gaps = 36/282 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +  +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++      +         P + +  S +    R
Sbjct: 54  KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPEVPSIHSTAM-FPR 112

Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             V   +E   +GK+ ++ + HL                       A  L        + 
Sbjct: 113 ICVWGKLEDSTDGKQFYIFNTHLDHIS-------------EEARLFASQLLLHKASLIQE 159

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPID 258
            +P ++ GDFN + +    N    +  D         K      +  + LR       ID
Sbjct: 160 DLPVILLGDFNTEPSTPTYNLITQRYQDAQLLSKTPVKGPLGSFHDFQPLRPESELEKID 219

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Y  +            F    Y     +  G   SDH P+  
Sbjct: 220 YIFVSNE---------FHICSYETSTDEIDGCSASDHFPVMA 252


>gi|332308078|ref|YP_004435929.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175407|gb|AEE24661.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 237

 Score = 82.7 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 89/281 (31%), Gaps = 52/281 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+V++NI++    + V             Y+ + Q+  + + DI  +QEM +     + 
Sbjct: 1   MRIVTYNIHSGVGVDEV-----------QSYSRIGQFLASQNVDIALIQEMDTRPC-ERD 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++   +  +    ++ S            AV  +   +  ++  +            R
Sbjct: 49  TEQDIKDLSANHFIALSRSPALEETHGWYGNAVLSRYPVLSTKTVDVSQDGF-----QPR 103

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESL 202
              E++++ +   + V++ H                      +Q   L +++ Q    S 
Sbjct: 104 NIQEVVLDTHVGPVRVINTHKGLKK-------------QERRKQFALLAEYLEQSMAVSS 150

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GDFN    +        + +          ++K +             +D    
Sbjct: 151 IPLIVGGDFNEWQFFTRAFRTINQVL---------TEQKVAATFPTAWPLF--RLDRMWT 199

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                           +    +     +  SDH PI + +D
Sbjct: 200 S------FNDNKIEAQVLKTPET----RYYSDHYPILLTFD 230


>gi|313158853|gb|EFR58233.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 299

 Score = 82.7 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 95/336 (28%), Gaps = 75/336 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-------------------------------VRLVSWN 30
           ++KY+  ++   + C A+                                    RLV++N
Sbjct: 4   LKKYLTIMLLLGLTCPATACNSSSSSEDEVPPHLKPETPEEPGRDYYPKADGATRLVTYN 63

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-KVFPKNTW 89
           +   ++                 Y ++        AD+V + E+ S      +VF    +
Sbjct: 64  VGVFTKYISDGS-----------YQMIADMMTEGKADLVGISELDSCTVRTGRVFQLKKF 112

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                 E    +S+  +         +  +   V   + PL         A  R  V + 
Sbjct: 113 AGLMGKEWSYEYSRAMAYQGGAYGDGIASREKPVRTFAAPLPKGDG----AEPRVMVVME 168

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIA 208
            E    K      HL               S    + Q   +   I  +   S  P  + 
Sbjct: 169 FE----KYVFATTHLDH------------VSTLAQAGQVDEINKVIEREFGGSKKPVFLG 212

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GDFN + +    +             +  P       ++++       IDY ++      
Sbjct: 213 GDFNARPDSPTISKL------KTGWTVLTPHGASDFTHSSQAPNKC--IDYILLWNGNGA 264

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +L   D  K   KR SDH P+ +D  F
Sbjct: 265 KCDVVGTKIML---DFNKGDIKRASDHIPVLVDVKF 297


>gi|256762238|ref|ZP_05502818.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T3]
 gi|256683489|gb|EEU23184.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T3]
          Length = 254

 Score = 82.7 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDNIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           Q      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|256831937|ref|YP_003160664.1| 5'-Nucleotidase domain-containing protein [Jonesia denitrificans
           DSM 20603]
 gi|256685468|gb|ACV08361.1| 5'-Nucleotidase domain protein [Jonesia denitrificans DSM 20603]
          Length = 1506

 Score = 82.7 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 93/350 (26%), Gaps = 78/350 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSL----------------------WKNSVKRTTSDYT----- 55
            + L S+N+       G                           ++  R   D       
Sbjct: 298 DITLASFNVLNYFTTTGEDWINAGHTCSSYTDKDGQAITTRSCSDNGPRGAWDTESFTRQ 357

Query: 56  --LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN------ 107
              +      LDA +V L E+ +  A+ +   + T  +  +        +  +       
Sbjct: 358 QNKIVAAINALDASVVGLLEIENSAALGEDTDEATTTLVAALNAAAGEKRWAAVASSQQL 417

Query: 108 ------NDIHTAIAVRKKNVRVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIW 158
                 + I  AI  +  +V +L Q   L    GA  +FS A        +   +G+  +
Sbjct: 418 PPASEQDAITNAIIYQVDHVELLGQPQALGDKSGAGQAFSNAREPIGQAFIPATDGEPFF 477

Query: 159 VLDIHLKSF------CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV--------P 204
            +  H KS          D   +    S +    QA  L  W+    +++          
Sbjct: 478 YVVNHFKSKGSAGPLPGDDDQGDGQGSSNASRVAQATALTQWVPTALDTIAKETGTTITD 537

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
             +AGDFN               +               +  +         +D+ + + 
Sbjct: 538 VALAGDFNAYTREDP-----MTVLSDAGYTNAAATHAPDKA-SYSYQGLSGSLDHILYND 591

Query: 265 NAYKFLIQESFSEILYNEDDIKSR--------------GKRLSDHCPISI 300
           +    +       I   E                      R SDH P+ +
Sbjct: 592 SFADRITGADIWNINAPESIALEYSRYNYHGTVFYENNAYRSSDHDPVIV 641


>gi|163802061|ref|ZP_02195957.1| aspartyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159174202|gb|EDP59010.1| aspartyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 428

 Score = 82.7 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 95/295 (32%), Gaps = 32/295 (10%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +    ++++++N+  L                    T + +  K+   DIVF+QE+
Sbjct: 156 AVKPTERDSLKVLTYNVWMLPHVGSN---------MDIRATRIAEEVKDH--DIVFMQEV 204

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +   ++ +         I+       ++ +    V      ++ QS  +    
Sbjct: 205 -----FRRKNEEDIYFTMNEHFDYISDKLDGGGSNTYDGGVVTFSKFPIITQSQYVFNNC 259

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                A ++  +   +  +     +L++HL S+               +   Q   +K +
Sbjct: 260 IGTDCAADKGVLYTKILKDDHNFHLLNLHLGSW--------NSRSHRDVRILQIYEIKAF 311

Query: 195 ITQ-KKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-- 250
           + Q       P ++ GDFN  K  +  +      +++  +  +  P +       N N  
Sbjct: 312 LEQLSIPDGEPIILGGDFNIAKYKFPLDFSMLLDSLNLLEPELTGPLKYSYDPLVNINLA 371

Query: 251 ---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +  +DY +   N            +  N D     G  LSDH  +S  +
Sbjct: 372 GGDAAERERLDYLLYVDNGAIASSTAKIEVL-RNFDAAMWGGWDLSDHHAVSSTF 425


>gi|149920938|ref|ZP_01909399.1| hypothetical protein PPSIR1_13970 [Plesiocystis pacifica SIR-1]
 gi|149818210|gb|EDM77665.1| hypothetical protein PPSIR1_13970 [Plesiocystis pacifica SIR-1]
          Length = 276

 Score = 82.7 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 89/293 (30%), Gaps = 49/293 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++R+V++N+                  T      + +  +   AD++ LQE+ +   +
Sbjct: 21  PSRLRVVTYNVL------------ADEVATAERIPAVFRVLREARADLIALQEV-APWFL 67

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             V        ++  E     ++            +  +      ++  L G       A
Sbjct: 68  PWVADTPWLREYFVAEIDGAPARP-------NGQFILSRFPVPHARALRLPG-------A 113

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  +   VE+ G +   +           +   +      + ++Q   +   + ++++
Sbjct: 114 QGRSLLVAHVELGGGERLAV---------GTTHMESLLEDGPVRARQLDAIFAALERERD 164

Query: 201 SLVP--FVIAGDFNRKINYLGNND-------DFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                  +  GD N       + D       D W  + P +    +  E+     A    
Sbjct: 165 DPQVDATIFCGDLNFGDGERPDTDHLDPDFVDAWTALRPGEPGHTWDIERSDMARAGSFP 224

Query: 252 RNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +D  ++  ++++     S   I         RG   SDH  +  + +
Sbjct: 225 GEPSRRLDRVLVRGSSWR---PASIEIIGDEPVVPGQRGLFPSDHFGLVAELE 274


>gi|91227439|ref|ZP_01261803.1| extracellular nuclease-related protein [Vibrio alginolyticus 12G01]
 gi|91188589|gb|EAS74880.1| extracellular nuclease-related protein [Vibrio alginolyticus 12G01]
          Length = 984

 Score = 82.7 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/381 (10%), Positives = 94/381 (24%), Gaps = 96/381 (25%)

Query: 16  CTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66
             A     +R+ S+N+        +          R  ++          +      +DA
Sbjct: 467 APAIADSDLRIASFNVLNYFNSVADSGHENPTGQNRGATNLDEFLIQQAKIVAAMNKMDA 526

Query: 67  DIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHT 112
           DI+ L E+ +      +A+  +           ++ +      E+     +   ++ I  
Sbjct: 527 DIIGLMEVENNGFGDGSAIQNLVDALNAEIDDAEDHYTYVEIEEQDKYQDEYFGSDAIMV 586

Query: 113 AIAVRKK--------NVRVLQQSY--------PLLGAKDSFSRAGNRRAVELLVEIN--G 154
           AI  R           V +  + +              +       R ++     +   G
Sbjct: 587 AILYRANAVTPKDAAKVIITPEQHIAENTITRKEGTESNPAYDKYQRHSLLQTFTVKETG 646

Query: 155 KKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           + + ++  H KS                   +      +     A  + + + + K    
Sbjct: 647 EDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKEVKGD-- 704

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235
             ++ GD N                           + TI                    
Sbjct: 705 -VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTTIGDGELQVEKTKIEKGYGLHN 763

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                  +   +         +D+ +   +  + ++      I   E ++     +    
Sbjct: 764 LNTLLHGTDTFSYTYSGELGNLDHALASSSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 823

Query: 292 ---------LSDHCPISIDYD 303
                     SDH P+ I  D
Sbjct: 824 MPKYKDAFSASDHDPVIIAID 844


>gi|229169798|ref|ZP_04297495.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
 gi|228613648|gb|EEK70776.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
          Length = 352

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 108/322 (33%), Gaps = 64/322 (19%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + ++ ++NI               G     +S ++T  + T +  + +N ++D   LQ
Sbjct: 52  GNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLTNMLSFLQNENSDFTLLQ 111

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKK 119
           E+   +   + F  N              S   + +                  ++   K
Sbjct: 112 EVDIKS--HRSFDVNEHEFLKKGLPDYASSFGKNYDTKWVPVPVTKPMGNAEGGLSTFSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                   + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 170 YTVQTATRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKYVRLVNVHLSA---------- 219

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQA++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P   +  
Sbjct: 220 YDEGGKIRKQQAEYLKEYMNECYQNGDYVILGGDWNQLLSNVQLSDPKFVKERPEWLVEL 279

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 280 PKDFADGGFQWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 338 EN----------SDHNPVSAVF 349


>gi|291403439|ref|XP_002718079.1| PREDICTED: APEX nuclease 1 [Oryctolagus cuniculus]
          Length = 318

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 73/311 (23%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  A  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKAATLKICSWNVDGLRAWIKKKG---------------LDWIKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                      K    +         +    S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE------NKLPAELQELPGLPHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                   A                  +DYF++  +    L                   
Sbjct: 255 HLYPDTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|189183086|ref|YP_001936871.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
 gi|189183300|ref|YP_001937085.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
 gi|189179857|dbj|BAG39637.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
 gi|189180071|dbj|BAG39851.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
          Length = 261

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 74/306 (24%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++WNIN                       LL++     + DI+ LQE        K+
Sbjct: 1   MKIITWNIN----------------SIRIRIPLLQKLVHLYNPDIIALQE---TKVEDKL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP            L       S    +  +A+  +       +  L   +         
Sbjct: 42  FP------VTECINLGYKYITYSGQKSYNGVAILSRISFESTFAINLYNDEKR------- 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + IN  ++ + + ++ S    D  +   +           ++  W    K    
Sbjct: 89  -----HIAINIGELSIHNFYVPSG--GDIPDANVNIKFKHKLCYVDFMNAWFLNNKSKKD 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N                               I   D +             
Sbjct: 142 KIILLGDLNIAPLESDVWSSYQLRNVVSHTDIERKKLMHNITSFDWIDAVRFFSGKHEKL 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  +    +                      SDH P
Sbjct: 202 YSWWSYRNVDWSKSDRGRRLDHIWISHHLESKIKSCIII-------KDARGWDMPSDHVP 254

Query: 298 ISIDYD 303
           + ++ +
Sbjct: 255 VMLEIE 260


>gi|37993819|gb|AAR06988.1| sphingomyelinase [Bacillus cereus]
          Length = 252

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 84/236 (35%), Gaps = 33/236 (13%)

Query: 17  TASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +++ A         +++++ N+  LS      L+ N  +   +D      Y K  + D+V
Sbjct: 23  SSAQADTSTDQNNILKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVV 76

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKN 120
            L E+   +A  ++           T         E         S+      +A+  K 
Sbjct: 77  ILNEVLDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKW 136

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             V +  Y             N+  V   ++ N + + V+  HL++    DS+    SP+
Sbjct: 137 PIVEKVQYVFANGCGP-DNLSNKGFVYAKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA 192

Query: 181 CSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
            S+ + Q + ++D+I  +   +    +  GD N        N        +KT+  
Sbjct: 193 -SVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHA 247


>gi|325927981|ref|ZP_08189202.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118]
 gi|325541666|gb|EGD13187.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118]
          Length = 259

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+      D+V +QE  +  +    
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLAAFAPDVVGIQETKLEDHKFPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +   +                 +  +A+  ++  V  Q               
Sbjct: 45  AALAALGYRSVFC------------GQKTYNGVAILSRSPAVDVQ-----MGIPGLDDVQ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +      DWI Q+ + 
Sbjct: 88  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQR 136

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246
               V+ GDFN   +    +D         +   D            L    +  +    
Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAE 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        ++          D      +R SDH P
Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249

Query: 298 ISIDY 302
             +  
Sbjct: 250 AWVRL 254


>gi|257460806|ref|ZP_05625907.1| exodeoxyribonuclease III [Campylobacter gracilis RM3268]
 gi|257442137|gb|EEV17279.1| exodeoxyribonuclease III [Campylobacter gracilis RM3268]
          Length = 252

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 85/304 (27%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L    G   +                +    + D + LQE+       K 
Sbjct: 1   MKLISWNVNGLRAVLGKDGF---------------AWLAEQNPDFLGLQEI---KVSEKD 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            PK  + + +S   L +     +    ++ +A   K      ++      +         
Sbjct: 43  APKGLYELGFSQIDLNS-----AARAGYSGVASLAKFKSETSKALFFPDDEGR------- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +++     + + +I+  +    ++         +     A+ L +         +
Sbjct: 91  -----VLQHRFGDVVLFNIYFPNGQKDEARLAYKMEFYAKFLAYARSLAE-------QGL 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GD N                    L     +   ++    +  F        +A 
Sbjct: 139 GVIFCGDVNTAHREIDLANPKANSKTSGFLPIERAWLDEVEAAGFVDTFRAVHGELRDAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +  N    L            D         SDHCP+ 
Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISANLRSQLK-----------DAFILSDVMGSDHCPVG 247

Query: 300 IDYD 303
           I+ +
Sbjct: 248 IEIE 251


>gi|162329924|pdb|2O3H|A Chain A, Crystal Structure Of The Human C65a Ape
          Length = 285

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 20  TSPSGKPATLKIASWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 64

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 65  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 114

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 115 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 167

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 168 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 221

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 222 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 272

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 273 --GSDHCPITL 281


>gi|82702653|ref|YP_412219.1| endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC
           25196]
 gi|82410718|gb|ABB74827.1| Endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC
           25196]
          Length = 228

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 76/281 (27%), Gaps = 55/281 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ L ++NI+     +G                 +    + ++ADI+ LQE+  +    +
Sbjct: 2   QMTLATYNIHGCIGADGRFKPD-----------RIIDVLQEMNADIIALQEVEHHQV--E 48

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            +    +    +    I           H   A+  K   +      L            
Sbjct: 49  GYDLLDYFAVKTGFTAIA-GPTLVRRTHHYGNALLTKLPVLAVNRIDLT-----LPGREP 102

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+++ +  N +++ V+  HL                     QQ + L      +    
Sbjct: 103 RGALDVTLAWNDRRVHVVATHLGLRPS-------------ERRQQVRHLLKLFEIRL--T 147

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
             +V+ GD N    +                           C      +  + +D   +
Sbjct: 148 EIYVLMGDLNEWFLWGRPLRWLHAHFKR-----------PPHCATFPARKPFMALDRLWV 196

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   +          E    S  +  SDH P+    +
Sbjct: 197 HPRRRLKSL----------EAHSSSLARIASDHLPLKAIIE 227


>gi|254226796|ref|ZP_04920369.1| hypothetical protein VCV51_1756 [Vibrio cholerae V51]
 gi|125620689|gb|EAZ49050.1| hypothetical protein VCV51_1756 [Vibrio cholerae V51]
          Length = 869

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVIDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|228472005|ref|ZP_04056773.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228276617|gb|EEK15330.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 347

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 82/322 (25%), Gaps = 56/322 (17%)

Query: 25  RLVSWNINTLSEQ-------EGVSLWKNSVKRTTSDY-----------TLLRQYAKNLDA 66
            +  +N+  L +        +           T+  Y             + +       
Sbjct: 30  TVAFYNVENLFDTINDPKKFDDDRTPTGKDHWTSKHYYDHVNKLGQTIAKIGKDVTGQAP 89

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D V L E+ +   V  +         Y      N         I  A   ++   +  + 
Sbjct: 90  DFVGLAEVENREVVEDLVNSEALKDNYYGIVHYNSP---DARGIDVAFIYKQSVFKPTKT 146

Query: 127 SYPLLGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           S   L  KD+   R   R  + +  E++G+++  +  H  S    ++       +   L 
Sbjct: 147 SKHFLDIKDAAGKRRYTRDQILISGEMDGEEVHFIVNHWPSRSGGEA-------ASRPLR 199

Query: 186 QQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRF 237
           + A  L   I     ++ P    +  GDFN      G           K +   D     
Sbjct: 200 EAAAALNKRIFDSLTAINPMAKVISMGDFNDDPTNSGFKKILKTKADKKKVQQGDLYNPM 259

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-------------------QESFSEI 278
                          +    D FV+                               ++  
Sbjct: 260 ENMYKKGIGTLAYRDSWSLFDQFVLTYGYLAKEAEGYKYWKAGVFNSPELANPSGKYAGY 319

Query: 279 LYNEDDIKSRGKRLSDHCPISI 300
            Y      S     SDH P+ +
Sbjct: 320 PYRSYANGSYTGGYSDHFPVYL 341


>gi|120437488|ref|YP_863174.1| endonuclease/exonuclease/phosphatase family protein [Gramella
           forsetii KT0803]
 gi|117579638|emb|CAL68107.1| endonuclease/exonuclease/phosphatase family protein [Gramella
           forsetii KT0803]
          Length = 352

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/344 (11%), Positives = 87/344 (25%), Gaps = 55/344 (15%)

Query: 5   YVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSV-----------KRT 50
            ++++     P  +   +      +  +N+  L + E      +             ++ 
Sbjct: 7   LLVSMYLLFQPIFSQEKKDYEIQTIAFYNVENLFDTEDDPDTFDDDRTANGKDAWNFEKY 66

Query: 51  TSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
                 + Q    +          I+ L E+ +   +  +        ++      +   
Sbjct: 67  KQKIEHISQVLSEIGKEVTKTPPSIIGLCEIENKAVLEGLVSHPNLKDYHYGIVHYDSPD 126

Query: 104 RDSNNDIHTAIAVRKKNVRVLQ---QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                 I  A+  RK++ + +    +   L  + +   R   R  + +   +N ++I  +
Sbjct: 127 E---RGIDVALLYRKEHFQPINSKARKLILYESDNPGKRDYTRDQLVVSGLLNKEEIHFI 183

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             H  S    ++         + L+++   +   I          +  GDFN        
Sbjct: 184 VNHWPSRGGGEARSAYKREKAAYLNKRI--IDSLIK--INPEAKIISMGDFNDDPTNKSF 239

Query: 221 NDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------F 269
                     K + P D              +     +    D   M  N          
Sbjct: 240 KKILNTKPTKKELLPTDLYNPMENMLKQGKGSLAYRDSWNLFDQMFMTGNLVLGNDTGFQ 299

Query: 270 LIQESFSEILYNEDDIKSRGKRLS-------------DHCPISI 300
             Q       Y            S             DH P+ I
Sbjct: 300 FYQAGIFNKPYLITTAGQFRGYPSRTYGYSGYEGGYSDHFPVYI 343


>gi|254994979|ref|ZP_05277169.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str.
           Mississippi]
 gi|255003123|ref|ZP_05278087.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Puerto
           Rico]
 gi|255004249|ref|ZP_05279050.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str.
           Virginia]
          Length = 284

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 81/313 (25%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WN+N                        L         DI  LQE    +     
Sbjct: 10  IRILTWNVN----------------SVRKRVAHLCSVLTEHHVDIALLQETKCTDD---- 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------LQQSYPLLGAK 134
                     +    + +            +A+  K   V          ++    +   
Sbjct: 50  ------QFPLAELEDLGYKCYIHGQKSRNGVAILSKYPIVGELCNTVFDAEEEIGTVQDT 103

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S+S    R  +E LV+    K+ V  +++ +   +D+    Y  +     +        
Sbjct: 104 GSYSVTEARY-LECLVDYQDVKVRVASVYVPNGQEVDTETFVYKLNFLRCLKARLLKLLA 162

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFP 238
                      VI GD+N   + +   D   + +D                 +       
Sbjct: 163 REDW------LVIGGDYNVAPDDIDVYDA--QALDGKLCFHPKERAGLREILHLGFTDAF 214

Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +              +           ID+ ++  NA   L++ S               
Sbjct: 215 RILHEGKQEFSWWNYREGSWQRNRGMRIDHLLLSPNAVDKLVECSI-------LSSVRGL 267

Query: 290 KRLSDHCPISIDY 302
           +  SDH P+    
Sbjct: 268 ESPSDHAPVMCVL 280


>gi|302345223|ref|YP_003813576.1| exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845]
 gi|302150206|gb|ADK96468.1| exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845]
          Length = 249

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 83/302 (27%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G                   Q  K+LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRACVGKEFE---------------QQFKDLDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  K+  +       +   D   R    
Sbjct: 45  LSFPGYESYWN----------YADKKGYSGTAIYTKHKPLSVTYGIDIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +                   +     + ++  K +   
Sbjct: 91  -----VITLEMEDFYLVTVYTPN-------SQDGLRRLEYRMKWEDDFQAYL-HKLDEKK 137

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                         +   + +             +    +
Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNHKNAGFTDEEREKMTQLLSNGFIDTFRTLYPEQVTYS 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R +         IDYF++ +     L        +             SDHCP+ I
Sbjct: 198 WWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIHTEI-----------MGSDHCPVEI 246

Query: 301 DY 302
             
Sbjct: 247 IL 248


>gi|297587792|ref|ZP_06946436.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516]
 gi|302380031|ref|ZP_07268510.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3]
 gi|297574481|gb|EFH93201.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516]
 gi|302312257|gb|EFK94259.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3]
          Length = 253

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 84/306 (27%), Gaps = 78/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++L+SWN+N                          +   +L+ADI  LQE+    N +  
Sbjct: 1   MKLISWNVNGYRAVWKKGFK---------------EAFDSLNADIFCLQEIKMKENQMTD 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  +             +N   ++   V  K   +       +   D+  R   
Sbjct: 46  EMEIEGYHRY----------SYSANKAGYSGTLVYTKTEPIGVSFGIGIDEHDTEGR--- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++    +  ++++++  +        +               L+D         
Sbjct: 93  ------VITCEYEDFFLVNVYTPNSKQKLERLDYRMVWEDEFHNYLNILRDR-------- 138

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N   N                     +    +  +  +  F      + + 
Sbjct: 139 KPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERNKMSLLLNDGYIDTFRYFYPDKTDE 198

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDYF++  +    L+     + +             SDHCP+
Sbjct: 199 YSYWSYFAKARERNAGWRIDYFIVSDDLKDNLVDAKIHQSI-----------MGSDHCPV 247

Query: 299 SIDYDF 304
            ++ +F
Sbjct: 248 ELEINF 253


>gi|257466522|ref|ZP_05630833.1| hypothetical protein FgonA2_03678 [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|315917677|ref|ZP_07913917.1| DNAse I-like protein DHP2 [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691552|gb|EFS28387.1| DNAse I-like protein DHP2 [Fusobacterium gonidiaformans ATCC 25563]
          Length = 274

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 91/303 (30%), Gaps = 42/303 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++ +   L+F  +   +   +   + S+N+  L E                D+  + +  
Sbjct: 1   MKFFYQCLLFLCLSIASFAQEAY-IASFNVLKLGESP-------------KDFETMAKTI 46

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKN 120
           ++   D+V L+E+ +   + ++         ++ +  I+     +     + A   +K  
Sbjct: 47  EHF--DLVGLEEVITPEGLERLVKSLNKYTNHTWDYHISPFPVGTRKYKEYYAYVWKKDR 104

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V  L         +    +   R       +I       +  H                 
Sbjct: 105 VTFLSSEGFYPDRE----KLFIREPYGANFQIGKFDFTFVLQHAVYGKSETER------- 153

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRF 237
               + Q   +  +   + +     +I GDFN       +    +D  + I   D  I+ 
Sbjct: 154 -RAEAFQLVKVYRYFQDRNKKENDILIGGDFNLSAFDEAFSSLYEDKDQIIYGVDPRIKT 212

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                   N+          D   + +   +    +S   I +     K    ++SDH P
Sbjct: 213 TIGMKKMANSY---------DNIFLSKKYTEEFTGKS-GAIDFTNRQYKVMRNKVSDHLP 262

Query: 298 ISI 300
           + I
Sbjct: 263 VFI 265


>gi|255320035|ref|ZP_05361231.1| exodeoxyribonuclease III [Acinetobacter radioresistens SK82]
 gi|262380541|ref|ZP_06073695.1| exodeoxyribonuclease III [Acinetobacter radioresistens SH164]
 gi|255302903|gb|EET82124.1| exodeoxyribonuclease III [Acinetobacter radioresistens SK82]
 gi|262297987|gb|EEY85902.1| exodeoxyribonuclease III [Acinetobacter radioresistens SH164]
          Length = 273

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 85/305 (27%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD++ +QE   ++     
Sbjct: 14  LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVICMQESRITHAQWTD 58

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   +  +        DS  R   
Sbjct: 59  KFKPEGWYTHLFPAERPGYA----------GTAIYSRLPFISVKDGLGFELADSQGRF-- 106

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              V    ++  G  +++  ++L S    D        + +      +  +  + Q +E 
Sbjct: 107 ---VTAEFDLGFGYPVYICSLYLPSGSSGD-------EAQARKDYFLEEYQKILKQWREE 156

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD+N     +   +                +   I      +   +E      
Sbjct: 157 GKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAE 216

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +     +                + +  SDH P
Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYQACSPDWKNRTVNAWV-----------YKEQWFSDHAP 265

Query: 298 ISIDY 302
           + IDY
Sbjct: 266 VIIDY 270


>gi|313205315|ref|YP_004043972.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
 gi|312444631|gb|ADQ80987.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
          Length = 369

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 96/309 (31%), Gaps = 64/309 (20%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + + +   +L+S+N           +  +  K T  ++  + QYA + +ADI+ LQE   
Sbjct: 97  SETTSGTFKLLSYNT---------KMCGDLKKHTAENHNKVIQYAIDSNADIICLQEFTV 147

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             +   +  ++    F          ++ ++ +    +A   K   V +Q      A ++
Sbjct: 148 SGSNEYLTMEDINKAFAKYPYKHIQFRQKNSKE--NGVATFSKFPIVSKQKINYPSAYNN 205

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE---------------------- 174
                    +   + INGK + V++ HL+S    +  +                      
Sbjct: 206 S--------ILSDININGKIVRVINNHLESNRLTEYDKAMPAKLKNNWDTNKLTRVTRHF 257

Query: 175 -NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
            N    +  + + QA  +   I     S    ++ GDFN   +                 
Sbjct: 258 TNKLGSAFKIRAVQADTVAGVI---ANSPYKVIVCGDFNDVPSSYTYTKVKGSL------ 308

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              F +                 IDY   D  A             Y+  D K+     S
Sbjct: 309 KDAFAETGTGLGWTFNERYYHFRIDYVFFDPTA-------------YSIIDYKTDKVNYS 355

Query: 294 DHCPISIDY 302
           DH P+    
Sbjct: 356 DHYPVLCQI 364


>gi|262377172|ref|ZP_06070397.1| exodeoxyribonuclease III [Acinetobacter lwoffii SH145]
 gi|262307910|gb|EEY89048.1| exodeoxyribonuclease III [Acinetobacter lwoffii SH145]
          Length = 272

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD++ +QE   ++     
Sbjct: 14  LRVVSINVNGLRSSVTKG---------------LLEWMEQSDADVICMQESRITHAQWTD 58

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V           DS  R   
Sbjct: 59  KFKPEGWYTHLFPAERPGYA----------GTAIYSRLPFVSLTDGLGFELADSQGRF-- 106

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++   + + +  ++L S    D        + +      +     + Q ++ 
Sbjct: 107 ---IAAEFDLGLDQTVQICSLYLPSGSSGD-------EAQARKDHFLEEYAKILKQWRDE 156

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N     +   +                +   I      +   +E      
Sbjct: 157 NKSVIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFREVRKEAE 216

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +  +  +                + +  SDH P
Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYHACSPDWKERTVNAWV-----------YKEQWFSDHAP 265

Query: 298 ISIDY 302
           + IDY
Sbjct: 266 VIIDY 270


>gi|257126763|ref|YP_003164877.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
 gi|257050702|gb|ACV39886.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
          Length = 257

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 80/302 (26%), Gaps = 50/302 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +L+L+      +   A++ +++++NI       G                 L +  
Sbjct: 4   LKKILLSLIIMGTTVS--WAKEFKIMTYNIYGARLTNG---------------QKLGESI 46

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           K    D V LQE+  +   +      +              K    +     I+   +  
Sbjct: 47  KPYAPDFVSLQEVDKFTKRSNFKDITSDIAKELGYDYYYFQKSRDYDGGEYGISFISRYP 106

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                +Y L            R+ +   +        VL ++       D          
Sbjct: 107 LEKIYTYELPSLG-----VEKRQILIAELAKKSFGKKVLIMNTHLDFKPDIKPEEMKS-- 159

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                      + IT+  +      ++GD N        N+      D         K  
Sbjct: 160 ----------LEMITKFFKKDDLKFLSGDLNFLPTTTYYNEITKNWRDTYIEYNPDGKRT 209

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            S             IDY    Q+    +         Y  +D      +LSDH P    
Sbjct: 210 LSDP----------RIDYIFGSQSKKWKVKNS------YFINDATQDWTKLSDHLPYMTI 253

Query: 302 YD 303
            D
Sbjct: 254 LD 255


>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
           ATCC 23134]
 gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
           ATCC 23134]
          Length = 982

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 98/288 (34%), Gaps = 44/288 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++S+N+    E +   +      R+   Y  + Q+  +L+ADI+ LQE         
Sbjct: 131 QLKVISYNVL-CDEHDKEYV------RSKERYVAIAQHLAHLEADIIALQEATPLLIEFL 183

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    F+S        +            +  K    L +             +  
Sbjct: 184 RQQAWAKDYFFSEPPNSPTLRPF-------GQVILSKYPFSLVEHLY----------SPQ 226

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +R +    +ING+   V ++HL S             +  +  QQ + + +++   +   
Sbjct: 227 KRFLVAGWQINGEAFHVANVHLTSNHSD--------KAMGVRQQQLEVMTNYLKSLRGD- 277

Query: 203 VPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
              ++ GDFN +     +       +D W    P+D+   F  +++              
Sbjct: 278 --VLLVGDFNMREGENVDILTEHQFEDVWPLQHPDDAGFSFHPDENPLAERFSRSGLPGR 335

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            D   +   + ++L        L+ +  I     R SDH  +   YDF
Sbjct: 336 FDRMYLRSQSLQWL---PQHIKLFAKAPIAQDYLRASDHYGVFAVYDF 380


>gi|169630763|ref|YP_001704412.1| putative exodeoxyribonuclease [Mycobacterium abscessus ATCC 19977]
 gi|169242730|emb|CAM63758.1| Putative exodeoxyribonuclease [Mycobacterium abscessus]
          Length = 273

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 75/307 (24%), Gaps = 60/307 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            AQK+ + + N+N +         +N           L  + +   +DIV LQE+ +   
Sbjct: 2   SAQKITVTTINVNGIRAAVKERSAENRG---------LLPWLEQTSSDIVCLQEVRAEED 52

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +          +            S+    + + +  +      +        +    
Sbjct: 53  QLREALAPALAAGWQV------VSAASSVKGRSGVGILSRVPAASTRVALDADGGEFDES 106

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                     +E     + V  I+L +     + +                +   +    
Sbjct: 107 GRY-------LEAEIGDLTVASIYLPTGEAGTARQEEKER-------FMAAVGARMAVLA 152

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSR 244
            S    VI GD+N                              +     +  F       
Sbjct: 153 ASGRDTVICGDWNIGHTERDIKAWKANQKKAGFLPEERAWVGSLLEAGWVDSFRLLHPDV 212

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY +   +  +              +   +   R SDH
Sbjct: 213 DGPYSWWSWRGKAFDNDAGWRIDYHLATADLGRRA-------HSARVERADAYALRWSDH 265

Query: 296 CPISIDY 302
            P++++Y
Sbjct: 266 APVTVEY 272


>gi|228917707|ref|ZP_04081248.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228841944|gb|EEM87050.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 352

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 108/322 (33%), Gaps = 60/322 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQEMG----------SYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKK 119
           LQE+            +  + K  P            + +     +        ++   K
Sbjct: 110 LQEVDIKSLRSFDVNGHEFLKKGLPNYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTFSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P+  +  
Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLVEL 279

Query: 237 FPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                D       +                      ID F++  N    ++     ++ +
Sbjct: 280 PKDFTDGGFKWAVDSSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKF 337

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH P+S  +
Sbjct: 338 EN----------SDHNPVSAVF 349


>gi|224367727|ref|YP_002601890.1| hypothetical protein HRM2_06120 [Desulfobacterium autotrophicum
           HRM2]
 gi|223690443|gb|ACN13726.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 251

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 46/287 (16%)

Query: 21  AQKVRLVSWNINTLSEQEG----VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           ++K R V +NI   +           ++   +RT   +  +  + ++LD DIV L E+  
Sbjct: 2   SKKYRFVLYNIRYGTGSGWRFHTPFPYRGYTRRTDRHFGSITDFIESLDPDIVGLIEVDG 61

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +  ++   + +                      +T     K    V  Q    L     
Sbjct: 62  GSRRSRGVNQASQLA-------GVLGHSFLFESKYTRPLFSKHLPIVRWQGNAFLSKNGI 114

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            S+        +   +   ++    + L                 +    Q + L+  I 
Sbjct: 115 LSQKFLYFDQGVKRLVMEVELDTCVVFLVHLS----------IKYAHRQNQLRELQVLIH 164

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            +K+   P ++AGDFN  +          + + P             R     +   ++ 
Sbjct: 165 GQKK---PVIVAGDFNSFLG--------QRELAPFLEATSLKSANTGRLRTFPSRVPRME 213

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D+ +                      D+     RLSDH P+  D+ 
Sbjct: 214 LDFILHSPEII--------------IHDLDVPRVRLSDHLPLICDFS 246


>gi|126733500|ref|ZP_01749247.1| hypothetical protein RCCS2_05074 [Roseobacter sp. CCS2]
 gi|126716366|gb|EBA13230.1| hypothetical protein RCCS2_05074 [Roseobacter sp. CCS2]
          Length = 306

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 91/299 (30%), Gaps = 39/299 (13%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           VP        +R+ ++N++ +        W             L      +DAD++  QE
Sbjct: 31  VPLPEPDDNTLRVATYNVHYIILGRETGAWSVGDWERRKTPFNLA--FNAVDADVIGFQE 88

Query: 74  MGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------ 125
           M S    +  ++     W +  + +         +       I  R   + +L       
Sbjct: 89  MESFGRGSGGRINLTLDWLLENNPDYAAAAVGDPAAFPSTQPILYRSDRLTLLDDGWFFF 148

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              P +    +F+ +            N  G+   V+++H                S S 
Sbjct: 149 SDTPDVIYSRTFNGSFPAFTSWAQFRDNTSGEIFRVINLHTDY------------ASRSN 196

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             Q  + + D I           + GDFN +I     N    K ++       F   + S
Sbjct: 197 RIQSIELVADRIAPWMADNETLFVIGDFNGRIGDTVVNILADKGLN-------FAPVQGS 249

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + N+ +     ID+        + + Q       +        G+  +DH P+  DY
Sbjct: 250 TFHFNRGINLFGAIDHI-ASTGNAQLIGQPIVLRRKF-------AGEWPTDHYPVIADY 300


>gi|121729036|ref|ZP_01682037.1| hypothetical protein VCV52_2576 [Vibrio cholerae V52]
 gi|121628684|gb|EAX61155.1| hypothetical protein VCV52_2576 [Vibrio cholerae V52]
          Length = 869

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVEIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVIDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|294666217|ref|ZP_06731470.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292603990|gb|EFF47388.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 259

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+      D+V +QE  +  +    
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLAAFAPDVVGIQETKLEDHKFPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +   +                 +  +A+  ++  V  Q               
Sbjct: 45  AALAALGYRSVFC------------GQKTYNGVAILSRSPAVDVQ-----MGIPGLDDVQ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +      DWI Q+ + 
Sbjct: 88  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQR 136

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246
               V+ GDFN   +    +D         +   D            L    +  +    
Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAE 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        ++          D      +R SDH P
Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDTLRARAVESGI-------DREPRTWERPSDHAP 249

Query: 298 ISIDY 302
             +  
Sbjct: 250 AWVRL 254


>gi|282859926|ref|ZP_06269014.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
 gi|282587329|gb|EFB92546.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
          Length = 384

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 80/289 (27%), Gaps = 39/289 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+      + V                +  Y     ADIV LQE     A  
Sbjct: 117 GAIKILSYNVYLFDTWDDV----------EGKLNPIADYIIRSKADIVCLQEAKIETAKK 166

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSF-- 137
                     +   +R++  +  D N  + +   +  +         +  +    D    
Sbjct: 167 PNIMHTLRKHYKYIDRMVKRNSGDDNMVLLSKFPILSRDSIPYSSHSNMSVAYMLDVNGT 226

Query: 138 ------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                 +   +    E       + +       K+     SL +    +    + Q   +
Sbjct: 227 KTLLVNNHFESYGLTEEEKTSFTEMVDGKVAVKKAKGKSVSLIDKLGKTMMRRAPQVDAV 286

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             ++ +  +   P ++ GDFN        +D     +  +     +    +    +    
Sbjct: 287 AAYVKKYLDKGTPVILCGDFNDTPISYS-HDVINGLLTDS-----YASSGNGLGFSYNKS 340

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +    ID+               F       D   +     SDH PIS 
Sbjct: 341 KMYFRIDHIFASSE---------FEPYGAKVDKSINN----SDHYPISC 376


>gi|262381739|ref|ZP_06074877.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_33B]
 gi|262296916|gb|EEY84846.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_33B]
          Length = 253

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/305 (9%), Positives = 85/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N N L    G  L                ++      D++ +QE  +      +
Sbjct: 1   MKIITYNTNGLRAAVGKGLP---------------EWLAQEQPDVLCIQETKLQPDQFPS 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  +  + +   +          + +A+  K        +   G         
Sbjct: 46  ETFEALGYKSYLFSAQKKGY----------SGVAILTKQEP----DHIEYGMGIEKYDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + ++ ++  S    D  ++             +  + ++ + ++S
Sbjct: 92  GRF-----LRADFGDVSIVSVYHPSGTSGDERQD-------FKMIWLEDFQKYVVELQKS 139

Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                         +   + +    +        D + 
Sbjct: 140 RPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMTRFLSAGFTDTFRFLNPDKQE 199

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + R           IDY ++  N    +          +           SDHCP 
Sbjct: 200 YTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVKAAYILNDAVH-----------SDHCPA 248

Query: 299 SIDYD 303
            ++ +
Sbjct: 249 VLEIE 253


>gi|269119815|ref|YP_003307992.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
 gi|268613693|gb|ACZ08061.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
          Length = 244

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 83/281 (29%), Gaps = 50/281 (17%)

Query: 29  WNINTLSE---QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           +NI   +     + +   +  + ++      +  + K    D+V L E+   +   +   
Sbjct: 6   YNIRYGTGKYLHQPLKHIRGYLGKSVEQTDKIGDFLKKYKPDVVGLVEVDLGSYRTRRKN 65

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA---KDSFSRAGN 142
           +       +T               ++  +   K   + +Q    L     +       N
Sbjct: 66  Q-------ATFLGKQLGHYGIYEHKYSQNSSLMKVPVLRRQGNAFLSGLQVEGQKFHYFN 118

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
               +L++E+  K   +  IHL                     +Q   L + I       
Sbjct: 119 NGMKKLVIELETKDFSIFLIHLALG-------------AKTRLKQIVELYEVIDSC---T 162

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            PF+IAGDFN                  N ++   P           + + K  +D+ + 
Sbjct: 163 KPFIIAGDFNLFWGEEEIELFLRALNLKNANIKNIP--------TYPSWKPKKVLDFIIY 214

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +                  D       RLSDH P+ +D++
Sbjct: 215 SEGIKI-------------NDFKVLTDVRLSDHLPLYVDFE 242


>gi|296219454|ref|XP_002755889.1| PREDICTED: deoxyribonuclease-1-like [Callithrix jacchus]
          Length = 282

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 84/285 (29%), Gaps = 30/285 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E               +  + + Q       DI  +QE+   +  AV
Sbjct: 22  SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+          +   +++     +N         R   V  +   Y   G +   +  
Sbjct: 71  GKLLDNLNQDAPDTYRYVVSEPLGRNNYKERYLFVYRPDRVSAVDSYYYDDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +R    +       ++    I        D++    +     L  Q +W          
Sbjct: 131 FSREPAIVRFSSPFTEVREFAIVPLHAAPTDAVAEIDALYDVYLDVQEKW---------- 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            L   ++ GDFN   +Y+  +      +  +        +       + +       D  
Sbjct: 181 GLEDIMLMGDFNAGCSYVRPSQWSSIRLRTSPIFQWLIPDTADTTAMSTHCAY----DRI 236

Query: 261 VMDQNAY-KFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
           V+        ++ +S     +      S    + +SDH P+ +  
Sbjct: 237 VVAGTLLQDSVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVIL 281


>gi|325567278|ref|ZP_08143945.1| endonuclease/exonuclease/phosphatase [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158711|gb|EGC70857.1| endonuclease/exonuclease/phosphatase [Enterococcus casseliflavus
           ATCC 12755]
          Length = 259

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/285 (10%), Positives = 72/285 (25%), Gaps = 35/285 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+++ ++N+        V    +   +       +       D D++ +QE    +  A 
Sbjct: 2   KMKVATYNLR-------VDTDYDQEWQWHYRSEAVCSLIDYYDWDVLAIQEAR-PSQFAD 53

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     +    +        +         A  +       L               A +
Sbjct: 54  LAKLAQYASVTAERDGDGLGEGIGLYYQKEAFELLASGSFWLS--LTPTEPSIHPEAAYS 111

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  V  +++      +++               +       +    + L D I +     
Sbjct: 112 RLCVWAVLQEKKNPPFLVITT-------HLDNISEMARFEGMKVIFEQLADQIERY---- 160

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDY 259
            P ++ GD N +     +        +  +   +                  +    IDY
Sbjct: 161 -PVLLMGDLNAEPTERVHRYLEQHFQNAKEHGQKPHHGPKGSYQNFIYTLPWQELEEIDY 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                        + F+ +           +  SDH P+  +  F
Sbjct: 220 IY----------TKGFTVVKTACLTDSCDRRFPSDHFPLEAEVQF 254


>gi|254494845|ref|ZP_01051882.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
 gi|213690427|gb|EAQ41310.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
          Length = 333

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 93/298 (31%), Gaps = 65/298 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +S+   ++++S+N+   +  + +                + ++    + DI+ LQE  + 
Sbjct: 90  SSLNSDLKIMSYNVRMFNHWQWIEEEGIPN--------KISEFVSAKEPDILLLQEFHN- 140

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                           S     N+  +     N + +  +A+      + + S  L    
Sbjct: 141 ----------------SDNPSFNYPYKYIKLKNTNSNIGLAIYSNYKIINKGSLELTDTS 184

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL--------SQ 186
           ++         +   V      I + ++HL+S       EN    +   L         +
Sbjct: 185 NN--------IIFADVLKGKDTIRIYNLHLQSLELNAEAENFGQENSEKLLARLRAGFKK 236

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           QA+  ++++  +       +++GDFN            +  I  N               
Sbjct: 237 QAEQTEEFLLHEANWKGKKIVSGDFNNTA-----YSWVYNQISNNKKDAYIE--AGKGFG 289

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              N    + ID+ +              ++     +   S  ++ SDH PI    ++
Sbjct: 290 KTYNYAFPLRIDFIL--------------TDENAIINQFTSFNEKNSDHFPIQARINW 333


>gi|254285815|ref|ZP_04960777.1| hypothetical protein A33_2558 [Vibrio cholerae AM-19226]
 gi|150423997|gb|EDN15936.1| hypothetical protein A33_2558 [Vibrio cholerae AM-19226]
          Length = 869

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQITDKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIADVEQFGDSGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|86140857|ref|ZP_01059416.1| hypothetical protein MED217_16935 [Leeuwenhoekiella blandensis
           MED217]
 gi|85832799|gb|EAQ51248.1| hypothetical protein MED217_16935 [Leeuwenhoekiella blandensis
           MED217]
          Length = 330

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/325 (10%), Positives = 82/325 (25%), Gaps = 58/325 (17%)

Query: 24  VRLVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYT----LLRQYAKNLDAD----- 67
           V +  +N+  L +        +     +   + T   Y      +      +        
Sbjct: 9   VTVAFYNLENLFDTENDPITFDDDRTPEGKDRWTQEIYADKLLKMASVIAQIGPPEATTA 68

Query: 68  --IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
             +V + E+ +   +  +  +        +   I H        I   +    K  +V+ 
Sbjct: 69  PALVGVAEIENRKVLEDLVNQTPLK---QSHYGIVHYDSPDRRGIDVGLLYDPKLFQVVS 125

Query: 126 QSYP---LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                  L   +    R   R  + +   + G+++ +L  H  S    ++L         
Sbjct: 126 SKVYELKLYDPERENRRIYTRDQLLVSGNLAGERMHILVNHWPSRSGGEALT-------R 178

Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFW-----KTIDPNDSL 234
                A  L   I     S  P    +  GD N                  + +   +  
Sbjct: 179 PRRMAAAALNKRIIDSILSEEPYAKIISMGDLNDDPKDKSLKKILKTKARPEQVGLQEIY 238

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQ-------NAYKFLIQESFSEILYNEDDIKS 287
               +             +    D  ++           +++     F++      +   
Sbjct: 239 NPMERMAKRGQGTLAYRDSWNLFDQLLLSAAWLQRDYEHFQYYKAGIFNKRFLQTPEGPY 298

Query: 288 RGK------------RLSDHCPISI 300
           +G               SDH P+ +
Sbjct: 299 KGYPFRSFANGKYTGGYSDHFPVYV 323


>gi|290993621|ref|XP_002679431.1| predicted protein [Naegleria gruberi]
 gi|284093048|gb|EFC46687.1| predicted protein [Naegleria gruberi]
          Length = 531

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/324 (10%), Positives = 75/324 (23%), Gaps = 55/324 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GS 76
                ++++S+NI+                        + +  +    D++  QE+    
Sbjct: 221 PKTTSLKIMSYNIHNYEGN------------WIKRLMKMIKVIERNQPDVICFQEVRLDE 268

Query: 77  YNAVAKVFPKNTWCI-----------------FYSTERLINHSKRDSN------NDIHTA 113
              + K+   + +                   +         S                 
Sbjct: 269 KKDLKKLNNFHEFIFEDEYQLIHIKKALSQLGYIHYHSRPAMSYVQPFYMDVPPTMQEEG 328

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
           +A+  K   +    Y LL    S S    R  V   + I         DI        + 
Sbjct: 329 LAIFSKYPIIEA-DYTLLYRDLSDSSTHQRICVRARILIPHMNSFITADIFNTHLSLKEH 387

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------ 226
             N      +     A    +  +         V+ GDFN +      ++          
Sbjct: 388 ERNQNVLDINRF---ANLNVESSSSSSGKPTIQVVCGDFNLEPQEAAYSNMLIDGKWTDS 444

Query: 227 ----TIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                   + +     +   +           K  IDY +        +   +F      
Sbjct: 445 YISMRNSLSHTSKLLDEFTLANELTFSTNGDYKKRIDYILFRDFGSSIVNVSNFIIDGKA 504

Query: 282 EDDIKSRGKR--LSDHCPISIDYD 303
            +           SDH  +  ++ 
Sbjct: 505 SEYHYENDPYKAPSDHHAVVTEFT 528


>gi|167851455|ref|ZP_02476963.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei B7210]
          Length = 290

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 74/280 (26%), Gaps = 56/280 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+ ++NI+                 T S    +      L AD++ LQE+    A   
Sbjct: 4   ELRIATYNIHG-----------GLGAWTASAAERIAVVLDELCADVIALQEVPLGGARGA 52

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   +   T                   AV  +      +   L     SF     
Sbjct: 53  DV---LAHLRACTGMHAAEGPTIDTPARRYGNAVLSRFPIRAARMLDL-----SFGNREP 104

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A++  +E     + V+  HL               S +  S Q   L   +       
Sbjct: 105 RGALDADIECGFGVLRVVATHLGL-------------SATERSAQVARL---LAAFDTRA 148

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GD N         + F +       +  F +    R            +D   +
Sbjct: 149 LPVILLGDIN---------EWFVRGRALRALVTHFRRAPAPRTFPTLCPLFS--LDRIWV 197

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ++L+  +                   DH P+    
Sbjct: 198 HPG--EWLVDVAAHRSARARRAS--------DHYPLVARI 227


>gi|254230072|ref|ZP_04923470.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25]
 gi|151937406|gb|EDN56266.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25]
          Length = 986

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/378 (11%), Positives = 94/378 (24%), Gaps = 94/378 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLD 65
              A     +R+ S+N+        +          R  ++          +      +D
Sbjct: 468 AAPAIADSDLRVASFNVLNYFTSVADSGHDNPTGQNRGATNLDEFLIQQAKIVSAMNKMD 527

Query: 66  ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111
           ADI+ L E+ +      +A+  +           ++ +      E+     +   ++ I 
Sbjct: 528 ADIIGLMEVENNGFGDGSAIQNLVDALNAEIDDVEDHYTYVEIEEQDKYQEEYFGSDAIM 587

Query: 112 TAIAVRKK--------NVRVLQQSY--------PLLGAKDSFSRAGNRRAVELLVEIN-- 153
            AI  R           V V  + +              +       R ++     +   
Sbjct: 588 VAILYRANAVTPKEAAKVIVTPEQHIAENTITRKEGTESNPAYDKYQRHSLLQTFTVKET 647

Query: 154 GKKIWVLDIHLKSFCFL----------DSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           G+ + V+  H KS              DS       +C+     A  +       K+   
Sbjct: 648 GEDLSVVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAKVVG--EALKDIDG 705

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235
             ++ GD N                           + TI                    
Sbjct: 706 DVLVMGDLNAYGKEDPLLTLTDYSQEKYGRDIYTAAYTTIGGGELQVEKTKIEKGYGLHN 765

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                  +   +         +D+ +   +  + ++      I   E ++     +    
Sbjct: 766 LNTLLHGADTFSYTYSGELGNLDHALASSSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 825

Query: 292 ---------LSDHCPISI 300
                     SDH P+ I
Sbjct: 826 MPKYKDAFSASDHDPVII 843


>gi|311744927|ref|ZP_07718712.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
 gi|126577434|gb|EAZ81654.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
          Length = 301

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 98/321 (30%), Gaps = 48/321 (14%)

Query: 2   IRKYVLALVFFL----VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           I K +  + F L    +  +    + ++++++NI    +            + ++    L
Sbjct: 5   ISKTLFLIFFILGIQQIAYSQEAEKSLKVMTYNIWNGFDWG----------KDSARQENL 54

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAV 116
            Q+ K  + D++ LQE+ +Y+          W   +    +   +    ++      I  
Sbjct: 55  IQWVKTQNPDVLALQELCAYDVDKLKKDAAKWGHPYVQILKEKGYPTALTSKKPINLIEK 114

Query: 117 RKK-------NVRVLQQSYPLLGAKDSFSRAGNRRAVEL--LVEINGKKIWVLDIHLKSF 167
                     +V+     + ++    S +    R A ++   ++      +++     S+
Sbjct: 115 NVDNFWHGLLHVQTFGIDFYVVHLSPSDADTRLREAQQIKTRIQEQASDQYIILGDFNSY 174

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----GNNDD 223
              D+                      ++++K      +  G+F+             D 
Sbjct: 175 SPFDAYWLESKSDLRTK----------MSEEKNEKYSNLRLGEFDYAPMSEFLSIPAIDV 224

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               +D  +S            +      L N++ IDY +      +   Q         
Sbjct: 225 SLGKVDSEESYTFPTPALVGLYDQTAESILENRVRIDYILASPTLAQACSQVEIFNQGIP 284

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
           E         LSDH P+   +
Sbjct: 285 E--------TLSDHYPMMAVF 297


>gi|262393047|ref|YP_003284901.1| putative extracellular nuclease [Vibrio sp. Ex25]
 gi|262336641|gb|ACY50436.1| predicted extracellular nuclease [Vibrio sp. Ex25]
          Length = 984

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/378 (11%), Positives = 94/378 (24%), Gaps = 94/378 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLD 65
              A     +R+ S+N+        +          R  ++          +      +D
Sbjct: 466 AAPAIADSDLRVASFNVLNYFTSVADSGHDNPTGQNRGATNLDEFLIQQAKIVSAMNKMD 525

Query: 66  ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111
           ADI+ L E+ +      +A+  +           ++ +      E+     +   ++ I 
Sbjct: 526 ADIIGLMEVENNGFGDGSAIQNLVDALNAEIDDVEDHYTYVEIEEQDKYQEEYFGSDAIM 585

Query: 112 TAIAVRKK--------NVRVLQQSY--------PLLGAKDSFSRAGNRRAVELLVEIN-- 153
            AI  R           V V  + +              +       R ++     +   
Sbjct: 586 VAILYRANAVTPKEAAKVIVTPEQHIAENTITRKEGTESNPAYDKYQRHSLLQTFTVKET 645

Query: 154 GKKIWVLDIHLKSFCFL----------DSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           G+ + V+  H KS              DS       +C+     A  +       K+   
Sbjct: 646 GEDLSVVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAKVVG--EALKDIDG 703

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235
             ++ GD N                           + TI                    
Sbjct: 704 DVLVMGDLNAYGKEDPLLTLTDYSQEKYGRDIYTAAYTTIGGGELQVEKTKIEKGYGLHN 763

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                  +   +         +D+ +   +  + ++      I   E ++     +    
Sbjct: 764 LNTLLHGADTFSYTYSGELGNLDHALASSSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 823

Query: 292 ---------LSDHCPISI 300
                     SDH P+ I
Sbjct: 824 MPKYKDAFSASDHDPVII 841


>gi|15599367|ref|NP_252861.1| nuclease [Pseudomonas aeruginosa PAO1]
 gi|107103689|ref|ZP_01367607.1| hypothetical protein PaerPA_01004760 [Pseudomonas aeruginosa PACS2]
 gi|218889499|ref|YP_002438363.1| putative nuclease [Pseudomonas aeruginosa LESB58]
 gi|254237052|ref|ZP_04930375.1| hypothetical protein PACG_03084 [Pseudomonas aeruginosa C3719]
 gi|254242856|ref|ZP_04936178.1| hypothetical protein PA2G_03623 [Pseudomonas aeruginosa 2192]
 gi|9950380|gb|AAG07559.1|AE004833_10 probable nuclease [Pseudomonas aeruginosa PAO1]
 gi|126168983|gb|EAZ54494.1| hypothetical protein PACG_03084 [Pseudomonas aeruginosa C3719]
 gi|126196234|gb|EAZ60297.1| hypothetical protein PA2G_03623 [Pseudomonas aeruginosa 2192]
 gi|218769722|emb|CAW25482.1| probable nuclease [Pseudomonas aeruginosa LESB58]
          Length = 266

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ ++N+N                   +    L  + +    DIV LQE+ + +A  
Sbjct: 2   DTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  ++ + L+    L G         
Sbjct: 44  --------RFPAAALEKAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV          + V  ++L +       +  Y  +        + L     +  ES
Sbjct: 96  LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMES 141

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+AGDFN   +     D               + ++ +     +    +    R  
Sbjct: 142 GHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRL 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ ++  +    L            D      +  SDH P 
Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254

Query: 299 SIDY 302
            +  
Sbjct: 255 WVSL 258


>gi|167756678|ref|ZP_02428805.1| hypothetical protein CLORAM_02216 [Clostridium ramosum DSM 1402]
 gi|167702853|gb|EDS17432.1| hypothetical protein CLORAM_02216 [Clostridium ramosum DSM 1402]
          Length = 251

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 78/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N +        +                  K   ADI  +QE        ++
Sbjct: 1   MKLVSWNVNGIRACITKGFY---------------DVLKESKADIFCVQETKMQEGQIEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    S E              ++   V  K   +       +   D   R    
Sbjct: 46  EKHGYYTYMNSAE-----------KKGYSGTLVFSKEKPLNYSYGIGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V +  +K ++++ +  +                           ++   ++S  
Sbjct: 91  -----VVTLEYEKFYLVNCYTPN-------SQNELKRLDYRMHWEDDFLAYLKSLEKSK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                              +  N  +  +      +    
Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTNLLENGFIDTYRYLYPDQEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++     + + +      +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFICTDIL-----------GSDHCPVG 246

Query: 300 IDYD 303
           ++ D
Sbjct: 247 LEID 250


>gi|83951017|ref|ZP_00959750.1| hypothetical protein ISM_07945 [Roseovarius nubinhibens ISM]
 gi|83838916|gb|EAP78212.1| hypothetical protein ISM_07945 [Roseovarius nubinhibens ISM]
          Length = 341

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/336 (12%), Positives = 88/336 (26%), Gaps = 52/336 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + A  +RL +WN+       G+ L      R  +    + +   +   DI+ LQ +    
Sbjct: 8   AGADTLRLATWNVELSRAGPGILLRDLR--RGDAQADAVAEIIADHAPDILLLQGVDHDA 65

Query: 79  ------AVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTA---------------- 113
                 A+     +  + + Y      N       D + D                    
Sbjct: 66  DHLALLALQSRIAQAGYSLPYRYAPPPNSGLASGHDLDGDGRLGEPEDAQGFGRFRGEGG 125

Query: 114 IAVRKKNVRVLQQSY---------PLLGAKDSFSRAGNRRAVE-----------LLVEIN 153
           +A+  +      Q             L  +D+ +       +            + V   
Sbjct: 126 MALLSRYPIAAAQDLSGFLWVDLPHALLFEDTGAPLFPAAVLRDLRLASVAQWRVEVTAP 185

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDF 211
             +I +   H     F    +     +   L      L   +           FV+ GD 
Sbjct: 186 QGRITLFAFHAGPPVFDGPEDRNGRRNHDQLMFWQHVLAGELDGGLGPMPEGRFVLMGDA 245

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NANKNLRN-KIPIDYFVMDQNAYK 268
           N+            +T+  +  L                   +   + +DY +  ++   
Sbjct: 246 NQDPQRGEGRKAAIRTLLGDPRLQDPRPSHGDGTEMTTVHWPQTGPMRVDYILPSRDWEV 305

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 + +   N     +R +  S H  + +D  +
Sbjct: 306 AASGVHWPKTGPNTGPEAARAEAASRHRLVWVDLTW 341


>gi|260788648|ref|XP_002589361.1| hypothetical protein BRAFLDRAFT_218091 [Branchiostoma floridae]
 gi|229274538|gb|EEN45372.1| hypothetical protein BRAFLDRAFT_218091 [Branchiostoma floridae]
          Length = 275

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 68/267 (25%), Gaps = 30/267 (11%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            + +  + +       D+V LQE+ S     ++            + ++ +     +   
Sbjct: 23  PARFQAIGEELCTGRYDVVSLQEVWSQYVYEEMVS--------QVQDVLPYHHYFYSGWH 74

Query: 111 HTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
            + + V  +   +    +                 G + A    V   G +I +   H  
Sbjct: 75  GSGLCVFSRYPIIGSHQHRFTLNGFPHKPHHPDWYGGKMAGLCQVRHPGAEINIYVTHTH 134

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------N 216
                    +      +    QA  L  +I    +     ++AGD N +          +
Sbjct: 135 -----TEYNHENDKDKAHRVSQAFELSQFIRHTGQCADVNILAGDLNNQPFELGLKIIQS 189

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
             G  D +      N          D               DY +   +A   +      
Sbjct: 190 NTGMEDAWLTAEHRNAEDSGLTWNLDDNNFTCYPDYPPCRYDYVLYKGSARCRVKCVHCE 249

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
             ++            SDH  +    +
Sbjct: 250 TTMHKVPGKP---FNYSDHEGVVAHLE 273


>gi|254460243|ref|ZP_05073659.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2083]
 gi|206676832|gb|EDZ41319.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium HTCC2083]
          Length = 262

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/306 (10%), Positives = 67/306 (21%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       ++ +  +    D++ LQE  S     +
Sbjct: 2   SFTLATWNIN----------------SVRLREPIVCKLLQEEAPDVLCLQECKSPV---E 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P   +     T               +  +A+  K       +        +   AG 
Sbjct: 43  LIPTEAFAALGYTHM------VARGQKGYNGVAILSKLPIKEVGAEDFAQLGHARHIAGQ 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                         + V + ++ +    D  +   +            ++DW        
Sbjct: 97  LE----------NGVIVHNFYVPAG--GDVPDREKNEKFGQKLDYLTEMRDWFKTNSPRK 144

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GD N         D                    +          +   S    
Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKIVSHTPIEVEHLDDVMKAGDWHDVTRADISEGKL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                        ++ SDH P
Sbjct: 203 YSWWSYRAKDWDAANKGRRLDHVWATGDIASAAHSS-------RVLRDARGWEKPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|302534940|ref|ZP_07287282.1| exodeoxyribonuclease III [Streptomyces sp. C]
 gi|302443835|gb|EFL15651.1| exodeoxyribonuclease III [Streptomyces sp. C]
          Length = 267

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 72/273 (26%), Gaps = 56/273 (20%)

Query: 58  RQYAKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            ++    DAD+V LQE+ +  A   A+      W   ++   +               +A
Sbjct: 21  VEWLAGSDADVVCLQEVRAEEAQIPAEAREPEGWHTVFAPAAVKG----------RAGVA 70

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  +      +        D+  R        + V++ G  + V  ++L S     + ++
Sbjct: 71  LYTRREPERVRVGFGSDEFDASGR-------YIEVDLPG--VTVASLYLPSGEAGTAKQD 121

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LG 219
                          LK             V+ GD+N                       
Sbjct: 122 EKYRFMEEFLGYLGELKARA---AADGREVVVCGDWNICHQEADLKNWKTNRKNAGFLPE 178

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270
             +   K       +                   +           ID  V         
Sbjct: 179 EREWLGKVYAEAGYVDVVRGLHPDTEGPYSWWSYRGRAFDNDAGWRIDLQVASPGLAAKA 238

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ++          +  ++  +R SDH P+++ Y+
Sbjct: 239 VKAFV-------ERAETHPERWSDHAPVTVVYE 264


>gi|317501545|ref|ZP_07959741.1| exodeoxyribonuclease III Xth [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088593|ref|ZP_08337504.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316897056|gb|EFV19131.1| exodeoxyribonuclease III Xth [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407550|gb|EGG87050.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 250

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 75/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N +                         +    DADI  +QE          
Sbjct: 1   MKFVSWNVNGIRACVQKGF---------------LDFFTEADADIFCIQESKMQEG-QLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +       +   D   R    
Sbjct: 45  LDLPGYHQYWN----------YAVKKGYSGTAVFTKKEPLSVTYGIGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  + + ++  +     +  +             + L++          
Sbjct: 91  -----VITCEFEDFYFVTVYTPNSQNELARLDYRMRWEDDFRMYLKKLEE--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           +  +     +  F      R    
Sbjct: 138 PVIVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERGKFTELLDAGFIDTFRYFYPDREGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + ++  + L                      SDHCPI 
Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSESLKERLKDAKILT-----------DVMGSDHCPIE 246

Query: 300 IDYD 303
           +D D
Sbjct: 247 LDMD 250


>gi|260494509|ref|ZP_05814639.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
 gi|260197671|gb|EEW95188.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
          Length = 278

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 98/306 (32%), Gaps = 37/306 (12%)

Query: 1   MIRKYVLALVF--FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           M R  +L+++F  F +  T S+A +  + S+NI  L                  D     
Sbjct: 1   MKRGKLLSIIFALFFILSTLSLADEAYIASFNILRLGA-------------AKKDIVQTA 47

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVR 117
           +  K    DIV L E+ + N V ++  +         +  I+     S+    + A   +
Sbjct: 48  KILKGF--DIVGLVEVINRNGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYIYK 105

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           K  V+ ++        K S      R       +I       + +H              
Sbjct: 106 KDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------NN 153

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                  + +   + ++   + E     +IAGDFN       +    +K  D     I  
Sbjct: 154 ESQRKAENYKMVDVYNYFQDRDEKENDILIAGDFNL-YALDESFRPLYKHADKITYAIDP 212

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +         N       D F   Q   +     S   + ++ D+ K   + +SDH P
Sbjct: 213 AIKTTIGAKGRANSY-----DNFFFSQKYSQEFTGSS-GALDFSGDNPKLMREIVSDHIP 266

Query: 298 ISIDYD 303
           + I  +
Sbjct: 267 VFIVVE 272


>gi|254516326|ref|ZP_05128385.1| endonuclease/exonuclease/phosphatase family protein [gamma
           proteobacterium NOR5-3]
 gi|219674749|gb|EED31116.1| endonuclease/exonuclease/phosphatase family protein [gamma
           proteobacterium NOR5-3]
          Length = 312

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 87/282 (30%), Gaps = 35/282 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++++ NI        ++    S  RT  +   +     ++  ++V LQE    +  + 
Sbjct: 37  TIKVMTLNIAH-GRNSALNQLFVSKARTFENLDYIAALLADIAPNVVALQEADGRSRWSG 95

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F   T+    S    + H     +   +   A+  +   +   S     +  S  +   
Sbjct: 96  NFDHVTYIAEKSGLPCVVHGLHSRSWISNYGTALLSRGKPIASSSVSFSPSWPSKQKGFV 155

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              ++  V+     + ++ +H                       + + + + + Q  +  
Sbjct: 156 TTTIDWPVDQQRIPVTLVSVHF---------------DFLRKKVRDRQVSEMVAQLVDID 200

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+ GD N   +   ++      +D  D     P++           +    +D+ ++
Sbjct: 201 GPLVLMGDLNSHWSQKSSH--VRSLVDELDLQAFSPEKNGLGTYKKTTGK---RLDWILI 255

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            Q        E++  +               DH  +  +  +
Sbjct: 256 SQELA----FEAYEVLPDIVA----------DHLAVVAEISY 283


>gi|159124775|gb|EDP49893.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus A1163]
          Length = 439

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 100/313 (31%), Gaps = 34/313 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R + L L    +P  A+ A +  +++ N+  L      +         +     + +  
Sbjct: 1   MRSFHLVLAA-GIPALAATAGEFNILALNVAGLPPILNGNDVPGDKSDNSR---QIGRKF 56

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                D++ +QE  +Y+A         +       R          + ++T      +  
Sbjct: 57  AEYGYDVIHVQEDFNYHA-------YIYETDNHPYRTPTSGGAGIGSGLNT--LSNFEFT 107

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++  +      +       +    + V ++ G  +   ++H  +    D         
Sbjct: 108 NFVRTKWATCSNAEGADCLTPKGFTSMRVRVDEGVYVDFYNLHADAGSKDDD-------- 159

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFP 238
               S   Q L D+I     +    ++ GD N +    G+N   ++T +   N  +    
Sbjct: 160 VKARSANLQQLADYIK-VNSAGNAVLVFGDTNARYTRTGDNIRVFQTQNGMVNPWVELIL 218

Query: 239 KEKDSRCNAN-------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +       +N           +   +D      +    L    ++    +   +  +G  
Sbjct: 219 QGAAPAEGSNALLCQNPSTTNDCETVDKIFYRGSRAVDLRAVFWN--YESNKFLSDKGTI 276

Query: 292 LSDHCPISIDYDF 304
           LSDH PI+ ++ +
Sbjct: 277 LSDHNPITTNFTW 289


>gi|42784261|ref|NP_981508.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 10987]
 gi|42740192|gb|AAS44116.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus ATCC
           10987]
          Length = 327

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 109/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T  +   +  + +N ++D   
Sbjct: 25  ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 84

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N      +       S   + +                  ++  
Sbjct: 85  LQEVDIKSM--RSFDVNGHEFLKNGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 142

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + + NGK + ++++HL +        
Sbjct: 143 SKYKVQTAERFQLPGMEPWPKRLFDLDRAIVEHKIPVSNGKFVRLVNLHLSA-------- 194

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  ++    ++ GD+N+ ++ +  +D  +    P   +
Sbjct: 195 --YDEGGKIRKQQVEFLKEYMNKHYKNGDYVIMGGDWNQLLSNVQLSDPKFVKERPEWLV 252

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  D       +                      ID F++  N    ++     ++
Sbjct: 253 ELPKDFTDGGFKWAVDSSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 310

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 311 KFEN----------SDHNPVSAVF 324


>gi|326476302|gb|EGE00312.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Trichophyton tonsurans CBS 112818]
          Length = 707

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/363 (11%), Positives = 96/363 (26%), Gaps = 84/363 (23%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K  ++++N   +  +  +      +          LL    +  DADIV LQE+   + 
Sbjct: 322 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 381

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++  S  +              K + + +         
Sbjct: 382 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 441

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++V     ++G++I V++       +  + ++     
Sbjct: 442 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVN---AHIYWDPAYKDVKLVQ 498

Query: 181 CSLLSQQAQWLKD---------------------------------------WITQKKES 201
            +++ ++   L +                                        I     S
Sbjct: 499 SAIMMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETNNGENTSPPTPVEPSPSIEYSSPS 558

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245
            +P ++ GDFN + +                    D  +  +        F  +      
Sbjct: 559 QIPILVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRDRLYGNLTRQGMTHPFTLKSAYSAI 618

Query: 246 ----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISI 300
                 N        IDY     N  +        +  Y +           SDH  +  
Sbjct: 619 GELSFTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMA 678

Query: 301 DYD 303
           ++ 
Sbjct: 679 EFS 681


>gi|225024152|ref|ZP_03713344.1| hypothetical protein EIKCOROL_01020 [Eikenella corrodens ATCC
           23834]
 gi|224943177|gb|EEG24386.1| hypothetical protein EIKCOROL_01020 [Eikenella corrodens ATCC
           23834]
          Length = 251

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 92/290 (31%), Gaps = 50/290 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++ V + ++NI+             S          +    ++LD DI+FLQE+   +  
Sbjct: 2   SRAVSITTYNIH----------KGMSPLNRRLQLPQMVDALQHLDTDILFLQEVQGVH-H 50

Query: 81  AKVFPKNTWCIFYSTERLI-------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            +      +      E +        ++ +  +    H   A+  +    ++ +  +   
Sbjct: 51  KRQQNVPEFPAEPHGEVIGRQLAFACSYGQNATYAGRHHGNAILSRLPLQMRTNLNV--- 107

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             S +R   R  +   ++  G    ++ + +                     +Q + + D
Sbjct: 108 --SVNRLEQRGVLHCEIQPPGWDRPLICLCVHLNLREAD-----------RKRQYRTIAD 154

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           +I  +  S  P ++AGDFN       +   F + +  ++    F      R         
Sbjct: 155 YIEHQIPSDAPLILAGDFNDWRQRSCSR--FGQLLGLDE---AFAHLSAGRPKTFPARMP 209

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + +D                 + +           ++LSDH P+S   +
Sbjct: 210 ILSLDRIYTRH----------LTVLNAVSHQGLP-WQQLSDHLPLSAVVE 248


>gi|163745437|ref|ZP_02152797.1| exodeoxyribonuclease III [Oceanibulbus indolifex HEL-45]
 gi|161382255|gb|EDQ06664.1| exodeoxyribonuclease III [Oceanibulbus indolifex HEL-45]
          Length = 262

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 68/306 (22%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       L+ +       D++ LQE  S      
Sbjct: 2   SFSLATWNIN----------------SVRLREPLVLKLLAEHGPDVLCLQECKSPVDK-- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      + +              +  +A+  K   +            +      
Sbjct: 44  -------IPVEAFQAAGYTHMVARGQKGYNGVAILSKLPLLDAGDQDFAMLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   +E NG  I     +       D  +   +            ++DW    K   
Sbjct: 93  ---VAAKLE-NGTTIH----NFYVPAGGDKPDREINEKFGQKLDYLSEMRDWFHSDKPEK 144

Query: 203 VPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GD N         D               +    +    + +   ++     N 
Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKIVSHTPVEVEALGAVQDAGNWVDITRQDVPTGNL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +  +                     ++ SDH P
Sbjct: 203 YSWWSYRAADWDAADKGRRLDHIWATADIAQAGHSSHIV-------RDARGWEKPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFASFD 261


>gi|153815015|ref|ZP_01967683.1| hypothetical protein RUMTOR_01232 [Ruminococcus torques ATCC 27756]
 gi|145847583|gb|EDK24501.1| hypothetical protein RUMTOR_01232 [Ruminococcus torques ATCC 27756]
          Length = 252

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 75/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N +                         +    DADI  +QE          
Sbjct: 3   MKFVSWNVNGIRACVQKGF---------------LDFFTEADADIFCIQESKMQEG-QLE 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +       +   D   R    
Sbjct: 47  LDLPGYHQYWN----------YAVKKGYSGTAVFTKKEPLSVTYGIGIEEHDQEGR---- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  + + ++  +     +  +             + L++          
Sbjct: 93  -----VITCEFEDFYFVTVYTPNSQNELARLDYRMRWEDDFRMYLKKLEE--------KK 139

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           +  +     +  F      R    
Sbjct: 140 PVIVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERGKFTELLDAGFIDTFRYFYPDREGIY 199

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + ++  + L                      SDHCPI 
Sbjct: 200 SWWSYRFSARAKNAGWRIDYFCVSESLKERLKDAKILT-----------DVMGSDHCPIE 248

Query: 300 IDYD 303
           +D D
Sbjct: 249 LDMD 252


>gi|114332258|ref|YP_748480.1| endonuclease/exonuclease/phosphatase [Nitrosomonas eutropha C91]
 gi|114309272|gb|ABI60515.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas eutropha C91]
          Length = 253

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 89/289 (30%), Gaps = 48/289 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + + + ++NI+             S          LR Y ++L+ DI+FLQE+   + 
Sbjct: 4   SNRTLHIATYNIH----------KGLSFFNQRVVLHELRDYLRSLNVDIIFLQEVIGEHT 53

Query: 80  VA----KVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +     + +PK+    F +        + K    N  H   A+  +      +       
Sbjct: 54  LHASRFQDWPKDAQYEFLADAVWSDFAYGKNAVYNHGHHGNAILSRFPISSWE-----NE 108

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             S  R  +R  +   + I G K  +  I +    F                +Q + ++ 
Sbjct: 109 DISAHRFESRGLLHCELAIPGWKDALHCICVHLGLFK-----------RGRYRQLEAIER 157

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            I Q      P V+AGDFN        N      ++  +       +      +  ++  
Sbjct: 158 RIRQLVPPDAPLVLAGDFNDWRGVA--NQALASRLNLVEVFQYTQGKA---ARSFPSVLP 212

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +D   +            F               R+SDH  +S   
Sbjct: 213 LLRLDRIYIRG----------FQVKNARI-FHNRPWSRISDHAALSAQI 250


>gi|307151701|ref|YP_003887085.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7822]
 gi|306981929|gb|ADN13810.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7822]
          Length = 262

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/290 (11%), Positives = 76/290 (26%), Gaps = 45/290 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+              +          +         D++  QE  ++  +   
Sbjct: 3   LKIITFNLRY-------DKPDPAQNNWRVRRAAIASLLNYYSPDLMGTQEGKAHQLLDLH 55

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--------VRVLQQSYPLLGAKD 135
                +             +  +  + H AI   ++           + +          
Sbjct: 56  RMLPEYQSV-------GGDRTGTGTNEHCAIFYHRRRLKCLETGDFFLSETPEIPGSITA 108

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S+     R     + E   +   ++  +                S +     A+ + + +
Sbjct: 109 SWGNPHPRMVTWAVFEGIDEAKKIVFYNTHLDY----------RSATARELGAKLITERL 158

Query: 196 TQKKESLVPFVIAGDFNRKINYLGN---NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           +Q   +     +  DFN     L            I   D+L   P EK    N     +
Sbjct: 159 SQLDLTDSYLFVTADFNATPGSLPRTTFERPLSNGIKLYDALAEIPLEKQLSFNNF-TEQ 217

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ID    D  +                D  K  G   SDH P+  ++
Sbjct: 218 PTDAIDTIYYDSRS---------RLQQAKVDQQKWEGLIPSDHFPVIGEF 258


>gi|168214660|ref|ZP_02640285.1| exodeoxyribonuclease III [Clostridium perfringens CPE str. F4969]
 gi|170713849|gb|EDT26031.1| exodeoxyribonuclease III [Clostridium perfringens CPE str. F4969]
          Length = 250

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 75/299 (25%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y K+ DADI  LQE          
Sbjct: 1   MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LDLEGYFQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     +                  L         S  
Sbjct: 91  -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                         D + T+  +  +  F           
Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +           IDYF++  N    + + S    +             SDHCP+
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEIL-----------GSDHCPV 245


>gi|104773315|ref|YP_618295.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513293|ref|YP_812199.1| exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|103422396|emb|CAI96933.1| Exodeoxyribonuclease III [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116092608|gb|ABJ57761.1| Exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|325124912|gb|ADY84242.1| Exodeoxyribonuclease A [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 275

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 85/303 (28%), Gaps = 56/303 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWNI++L+     +  +  + R       + +   +LD D++ LQE     +    
Sbjct: 1   MRLISWNIDSLNAALTGTSPRAEMTRG------VLKNLHDLDPDVLALQETKLPASGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +     +  S  +     +       K       + P +GA +     G  
Sbjct: 55  KHQAALADLFPEYDFVWRSSMEPARKGYAGTMFLYKKGLEPVVTRPEIGAPEPMDFEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                      + L        +   
Sbjct: 114 -----ILTLEFPDFYVTQVYTPNAGNGLVRLGDRQEWDKCYRAYLEEL--------DKKK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F +         
Sbjct: 161 PVLASGDFNAAYQEIDLKHPENNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +           ++   G+R  DHCPI
Sbjct: 221 SWWAQRVRTAKANNSGWRIDYWLVSNRLADQVEKS----------EMIETGERA-DHCPI 269

Query: 299 SID 301
            ++
Sbjct: 270 LLE 272


>gi|254777166|ref|ZP_05218682.1| exodeoxyribonuclease III [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 272

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 73/305 (23%), Gaps = 64/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   S    +  +    D D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRSRLPRVLDWLARTDVDVLAMQETKCADG---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       +    +A+  +      +         S       
Sbjct: 41  ------QFPTLPFFELGYEVAHVGFNQWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    +      + +  +++ +   +      Y             L+D          
Sbjct: 95  AAEARALAATCAGVRIWSLYVPNGRAVGDPHYAYKLD------WLAALRDSAAGWLREDP 148

Query: 204 P--FVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                +AGD+N                           F   +D   + +  P       
Sbjct: 149 AAQIALAGDWNIAPQDDDVWSMEIFAGATHVSEPERRAFNAILDAQFADLVRPFAPGPGV 208

Query: 246 NANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               +        R  + ID+ +      +              D  + +GK  SDH P+
Sbjct: 209 YTYWDYTALRFPKRQGMRIDFILGSPALARR-------VTHAQIDREERKGKGASDHAPV 261

Query: 299 SIDYD 303
            +D  
Sbjct: 262 LVDVS 266


>gi|71064661|ref|YP_263388.1| hypothetical protein Psyc_0080 [Psychrobacter arcticus 273-4]
 gi|71037646|gb|AAZ17954.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 302

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 77/284 (27%), Gaps = 50/284 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L S+NI+             S          + Q    + +DI+ LQE+   N + +   
Sbjct: 59  LTSYNIH----------KGMSPMNRQVKVQGIAQALDIIGSDILCLQEVQGQN-LKRNIQ 107

Query: 86  KNTWCIFYSTERLI-------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            N +      E          ++ K     + H   AV  +         P      + +
Sbjct: 108 YNEYPDQSQHEWFGEYLQLENSYGKNSEYENGHHGNAVLSRFPL-----DPKHNVNITVN 162

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           +   R  +   V+  G  + V+ +      F                +Q + + +++  +
Sbjct: 163 KLEQRGVLHCEVQPVGWNVPVVVLCAHLNLF-----------ERDRIKQYEAIVNYVRDE 211

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P ++AGDFN             K          F                 + +D
Sbjct: 212 IAPDQPLILAGDFNDWKKMS-----CDKLASNLGMTEAFKHCHGKLLPTFPAKLPVLSLD 266

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +       +                     LSDH P+S + 
Sbjct: 267 RIYVRN---LRIKDAWVH--------TGKPWSTLSDHLPLSAEL 299


>gi|328472297|gb|EGF43167.1| extracellular nuclease-like protein [Vibrio parahaemolyticus 10329]
          Length = 984

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/382 (10%), Positives = 94/382 (24%), Gaps = 96/382 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65
              A     +R+ S+N+         S   N   +                +      +D
Sbjct: 466 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 525

Query: 66  ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111
           ADI+ L E+ +      +AV  +            + +      ++     +   ++ I 
Sbjct: 526 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 585

Query: 112 TAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--N 153
            AI  R K V                     +       +       R ++     +  +
Sbjct: 586 VAILYRAKVVTPKEAAKVIFTPEQHIAENTITRKDGAESNPAYDKYQRHSLLQTFTVQES 645

Query: 154 GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           G+ + ++  H KS                   +      +     A  + + +   K   
Sbjct: 646 GEDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKDVKGD- 704

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL------------- 234
              ++ GD N                           + TI+  +               
Sbjct: 705 --VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAGYTTINGGELQVEQTQIKQGYGLN 762

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
                   +   +         +D+ +   +  + ++      I   E ++   G +   
Sbjct: 763 NLNTLLHGTDTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTG 822

Query: 292 ----------LSDHCPISIDYD 303
                      SDH P+ I  D
Sbjct: 823 DMPKYKDAFSASDHDPVIIAID 844


>gi|260900883|ref|ZP_05909278.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308106508|gb|EFO44048.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus AQ4037]
          Length = 984

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/382 (10%), Positives = 94/382 (24%), Gaps = 96/382 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65
              A     +R+ S+N+         S   N   +                +      +D
Sbjct: 466 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 525

Query: 66  ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111
           ADI+ L E+ +      +AV  +            + +      ++     +   ++ I 
Sbjct: 526 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 585

Query: 112 TAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--N 153
            AI  R K V                     +       +       R ++     +  +
Sbjct: 586 VAILYRAKVVTPKEAAKVIFTPEQHIAENTITRKDGAESNPAYDKYQRHSLLQTFTVQES 645

Query: 154 GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           G+ + ++  H KS                   +      +     A  + + +   K   
Sbjct: 646 GEDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKDVKGD- 704

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL------------- 234
              ++ GD N                           + TI+  +               
Sbjct: 705 --VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAGYTTINGGELQVEQTQIKQGYGLN 762

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
                   +   +         +D+ +   +  + ++      I   E ++   G +   
Sbjct: 763 NLNTLLHGTDTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTG 822

Query: 292 ----------LSDHCPISIDYD 303
                      SDH P+ I  D
Sbjct: 823 DMPKYKDAFSASDHDPVIIAID 844


>gi|209964341|ref|YP_002297256.1| hypothetical protein RC1_1020 [Rhodospirillum centenum SW]
 gi|209957807|gb|ACI98443.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 322

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 87/324 (26%), Gaps = 56/324 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSD-------------YTLLRQYAKNLD----ADI 68
              WN+  L +       +  ++   +                 L      L      D+
Sbjct: 7   FAFWNVENLFDVADSPRREERIRSRIARELVGWDEAVLSRKLAQLAAVIPMLGGGRGPDV 66

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + + E+ + + + ++            +  + H++      I  A+   +    V +   
Sbjct: 67  LGVAEVENAHVLGRLAAALG----PGRDYGVVHAEGQDGRGIDVALLYDRALFTVNR--- 119

Query: 129 PLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             + ++    R+  R  ++  +     G  I VL  H  S          Y        +
Sbjct: 120 DEIFSRFIVRRSATRDILQATLTTVAGGNTIVVLVNHWPSRSGGAYESEPYRIMA---GE 176

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              +    I ++K      +  GDFN +       D    T   + +     +   +   
Sbjct: 177 SLSYFHQRILEEKGRDTAILAMGDFNDEPFNRSLQDYALATRARSKATHPQSQSFYNPMW 236

Query: 247 -------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK---------SRGK 290
                  +         +D  ++ +   +     +  E     + +           +  
Sbjct: 237 RFLGSAGSYVYDGEPNVLDQILVSRGLLRRGAPLTVREETLAIEALPALRTAKGGGRKFG 296

Query: 291 RLS-----------DHCPISIDYD 303
           R S           DH P+S+   
Sbjct: 297 RPSEPKSYDPDGYADHFPVSVTVS 320


>gi|28899573|ref|NP_799178.1| extracellular nuclease-like protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260361411|ref|ZP_05774473.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus K5030]
 gi|260876683|ref|ZP_05889038.1| nuclease [Vibrio parahaemolyticus AN-5034]
 gi|28807809|dbj|BAC61062.1| extracellular nuclease-related protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308093950|gb|EFO43645.1| nuclease [Vibrio parahaemolyticus AN-5034]
 gi|308112902|gb|EFO50442.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus K5030]
          Length = 984

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/382 (10%), Positives = 94/382 (24%), Gaps = 96/382 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65
              A     +R+ S+N+         S   N   +                +      +D
Sbjct: 466 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 525

Query: 66  ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111
           ADI+ L E+ +      +AV  +            + +      ++     +   ++ I 
Sbjct: 526 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 585

Query: 112 TAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--N 153
            AI  R K V                     +       +       R ++     +  +
Sbjct: 586 VAILYRAKVVTPKEAAKVIFTPEQHIAENTITRKDGAESNPAYDKYQRHSLLQTFTVQES 645

Query: 154 GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           G+ + ++  H KS                   +      +     A  + + +   K   
Sbjct: 646 GEDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKDVKGD- 704

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL------------- 234
              ++ GD N                           + TI+  +               
Sbjct: 705 --VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAGYTTINGGELQVEQTQIKQGYGLN 762

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
                   +   +         +D+ +   +  + ++      I   E ++   G +   
Sbjct: 763 NLNTLLHGTDTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTG 822

Query: 292 ----------LSDHCPISIDYD 303
                      SDH P+ I  D
Sbjct: 823 DMPKYKDAFSASDHDPVIIAID 844


>gi|184154634|ref|YP_001842974.1| exodeoxyribonuclease [Lactobacillus fermentum IFO 3956]
 gi|227513882|ref|ZP_03943931.1| exodeoxyribonuclease III [Lactobacillus fermentum ATCC 14931]
 gi|183225978|dbj|BAG26494.1| exodeoxyribonuclease [Lactobacillus fermentum IFO 3956]
 gi|227087743|gb|EEI23055.1| exodeoxyribonuclease III [Lactobacillus fermentum ATCC 14931]
          Length = 279

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 85/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWNI++++     +  +    R       + +  K    D++ +QE     +    
Sbjct: 1   MRFISWNIDSINAALTGTSARAEETR------AVLEKIKAAAPDVIAIQETKLSKSGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      ++   ++  S  +     +       K     + +YP +GA +     G  
Sbjct: 55  KHQGVLAELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDEEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  ++ +++  +                   +    L        +   
Sbjct: 114 -----IITLEFENFYLTEVYTPNSGTGLKRLAERQEWDDRYREYLTEL--------DRQK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                         + +  +        F         A 
Sbjct: 161 PVIASGDFNVAHEEIDLAHPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       ++  +  +                DH PI
Sbjct: 221 SWWAQRAVTSKVNNSGWRIDYWLVSDRLADQVVSSTMIDSGERR-----------DHAPI 269

Query: 299 SIDYD 303
            +D +
Sbjct: 270 QLDIN 274


>gi|121602932|ref|YP_980261.1| endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans
           CJ2]
 gi|120591901|gb|ABM35340.1| Endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans
           CJ2]
          Length = 277

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 80/286 (27%), Gaps = 48/286 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSY 77
             ++++ NI+                      + LR   + + AD+VFLQE+        
Sbjct: 32  SFKVLTVNIHKGFTFFNRKF----------ILSELRDAVRTVGADVVFLQEVAGSHLKHA 81

Query: 78  NAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                   +  +     S      + +       H   AV  K   V  ++  +  +   
Sbjct: 82  EKFDNYPEEPHYEYLADSIWEQFAYGRNAVYTHGHHGNAVLSKFPIVRFENRDISISG-- 139

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   +++ G+   V  I +                 S  +QQ + + D + 
Sbjct: 140 ---PERRGMLHCELQVPGQSRNVHAICVHLGLV-----------ESHRTQQMKLVCDLVR 185

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           ++     P V+AGDFN             +     +    F +               + 
Sbjct: 186 KEIPVRAPVVVAGDFNDW-----RRRAHAQMAKGANLHEVFVQANGQAARTFPARLPLLQ 240

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +        I                    LSDH P++ + 
Sbjct: 241 LDRIYVRNAIGHSPIVLPSH-----------PWSHLSDHAPLAAEI 275


>gi|310817228|ref|YP_003965192.1| exodeoxyribonuclease III, putative [Ketogulonicigenium vulgare Y25]
 gi|308755963|gb|ADO43892.1| exodeoxyribonuclease III, putative [Ketogulonicigenium vulgare Y25]
          Length = 262

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/308 (9%), Positives = 71/308 (23%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80
              L +WNIN                       L+ +  +    D++ LQE  S   +  
Sbjct: 2   TFTLATWNIN----------------SVRLRAELVARLLREELPDVLCLQECKSPVELIP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++F    +                     +  +A+  +       ++       +   A
Sbjct: 46  TEIFRALGYPYMI-----------ARGQKGYNGVAILSRLPMREVGAHDFADLGHARHIA 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G               + + + ++ +    D  +   +            ++D    +K 
Sbjct: 95  GQL----------DNGVTIHNFYVPAG--GDIPDREQNIKFGQKLDYLTQMRDHFHGEKP 142

Query: 201 SLVPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRC 245
                ++ GD N          +    K +               +   +   +      
Sbjct: 143 QKA--ILVGDLNIAPREDDVWNHKALLKIVSHTPIEVDHLGAAMDSGDWVDITRANIPEG 200

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+    ++                        +  SDH
Sbjct: 201 RLYSWWSYRSPDWDAADKGRRLDHIWATRDIAAAGHSS-------RVLRPARGWEGPSDH 253

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 254 APVFATFD 261


>gi|118922|sp|P11937|DNAS1_SHEEP RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I
          Length = 260

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 86/283 (30%), Gaps = 26/283 (9%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NI T  E +  +   +S          + +  +  D  ++         AV K+
Sbjct: 1   LKIAAFNIRTFGETKMSNATLSSY---------IVRILRRYDIALIEQVRDSHLVAVGKL 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S   +++     ++         R   V VL       G +   + + +R
Sbjct: 52  LDDLNQDDPNSYHYVVSEPLGRNSYKERYLFVFRPNKVSVLDTYQYDDGCESCGNDSFSR 111

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +       K+    I        D++    S     L  Q +W           L 
Sbjct: 112 EPAVVKFSSPSTKVKAFAIVPLHSAPSDAVAEINSLYDVYLDVQQKW----------DLN 161

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++ GDFN   +Y+ ++      +  + +      +       + N       D  V+ 
Sbjct: 162 DIMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAY----DRIVVA 217

Query: 264 QNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303
            +  +  ++  S     +      S      +SDH P+ +   
Sbjct: 218 GSLLQSSVVGPSAVPFDFQAAYGLSNEMALAISDHYPVEVTLT 260


>gi|86130797|ref|ZP_01049396.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
 gi|85818208|gb|EAQ39368.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
          Length = 328

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/330 (10%), Positives = 90/330 (27%), Gaps = 51/330 (15%)

Query: 14  VPCTASVAQKVR--LVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYTL----LRQY 60
                +  +K++  +  +N+  L +        +         +  +  +      L + 
Sbjct: 5   TAFAKAQTKKIKCAIGFYNLENLFDTKNDPATLDDDFTPGGFKEWNSYKFDKKVKKLAKV 64

Query: 61  AKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
              +          ++ + E+ +   +  +   +            +         I   
Sbjct: 65  ISKIGKKETATSPSLLGVAEVENKAVLEALIKTSKLEDEGYAIVHYDSPDE---RGIDVG 121

Query: 114 IAVRKKNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
           +  +KK+  V   ++  L    +   R   R  + +   + G ++ +L  H  S     +
Sbjct: 122 LLYKKKDFAVHKSEAITLYLETEEGDRDFTRDILYVQGNLLGTEVHILVNHWPSRRRGAN 181

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
             +      +  +++   + + + Q        +I GDFN   +         KT   N 
Sbjct: 182 ETSHKRIKAAQKNREL--IDNLVAQ--NPEARVIIMGDFNDGPHSESIKKHLVKTDFYNP 237

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE------------------- 273
            L    + + S     +        D  +   N  +    +                   
Sbjct: 238 MLYLGTRYEGSLNYNYEWFIF----DQIIFSNNFVRIYDNDLLYEKSDIYNDFYLTEYDG 293

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            F    +     K+     SDH P+     
Sbjct: 294 KFKGNPFRTYAGKNYLGGYSDHFPVFTILT 323


>gi|315921791|ref|ZP_07918031.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2]
 gi|313695666|gb|EFS32501.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2]
          Length = 367

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 84/342 (24%), Gaps = 71/342 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+VSWNI  L +    SL  +           +  R       + +    +       
Sbjct: 32  SFRVVSWNIENLFDTHHDSLKNDHEYLPDAIRHWNYSRYKKKLADVARVITAIGEWNPPA 91

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V L E+ +   +  +  ++          + N         I  A+  ++   ++L   
Sbjct: 92  LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 148

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-LS 185
              +           R  + +  + + G  + V   H  S          Y    +  L 
Sbjct: 149 S--ISIPPFKQHRPTRDLLHVSGLLLAGDTLDVFVCHFPSRSGGAKESEPYRLYVAHILR 206

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227
            +   + +       S    +I GDFN                                 
Sbjct: 207 TEVDSIMN-----IRSHPQAIIMGDFNDYPTNQSILKILKAEAPPVKTNDLASTTDSANA 261

Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268
                       +   K K     + K       +D+ ++                    
Sbjct: 262 STVTPSSLKLYHLLARKAKSENFGSYKFRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 321

Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     ++   +  +           +SDH PI  D++
Sbjct: 322 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGISDHLPIYTDFE 363


>gi|298385343|ref|ZP_06994901.1| exodeoxyribonuclease III [Bacteroides sp. 1_1_14]
 gi|298261484|gb|EFI04350.1| exodeoxyribonuclease III [Bacteroides sp. 1_1_14]
          Length = 254

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 89/305 (29%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N+N L       L                ++    + DI+ LQE  +      A
Sbjct: 2   MKIITYNVNGLRAAVSKGLP---------------EWLVQENPDILCLQETKLQPDQYPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +VF    +  +  + +   +          + +A+  K        +   G         
Sbjct: 47  EVFEALGYKAYLYSAQKKGY----------SGVAILTKQEP----DHVEYGMGIEAYDNE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++  S    D  +       +      +  + ++T+ +++
Sbjct: 93  GRF-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVTELRKT 140

Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                         +   + +             + + 
Sbjct: 141 RPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLSAGFIDSFRLLYPEKQE 200

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + R           IDY +  +     L   S      +           SDHCP+
Sbjct: 201 YTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSASILNDAVH-----------SDHCPM 249

Query: 299 SIDYD 303
           +++ +
Sbjct: 250 ALEIE 254


>gi|295680429|ref|YP_003609003.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
 gi|295440324|gb|ADG19492.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
          Length = 250

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 80/287 (27%), Gaps = 56/287 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T +  +++R+ ++N++     +G                 +      +DADI  LQE+  
Sbjct: 15  TFARERELRIGTYNLHGAVGIDGKFAP-----------KRIGDVLTEIDADIFALQEVPL 63

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A +         +                       AV  +      ++  L     S
Sbjct: 64  GGASSPDVLALLQRMTGLDAVAGPT---FDTPARRFGNAVLTRYPVRAVRTLDL-----S 115

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F     R A++  ++ NG+   V+  HL               + S    Q + +     
Sbjct: 116 FKSREPRGALDADIDCNGELWRVVATHLGL-------------ASSERRAQVEQVLQRFD 162

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N         + F         +  F +    R    +       
Sbjct: 163 TPA---LPVILLGDLN---------EWFVYGRTLRRLVTHFRRATALRTFPTRFPLF--A 208

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D   +               +L  +    +  +  SDH P+     
Sbjct: 209 LDRIWVHPG----------ERLLRVDVHRTALSRVASDHYPLIAHIS 245


>gi|110801105|ref|YP_695823.1| exodeoxyribonuclease III [Clostridium perfringens ATCC 13124]
 gi|110675752|gb|ABG84739.1| exodeoxyribonuclease III [Clostridium perfringens ATCC 13124]
          Length = 250

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 76/299 (25%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y K+ DADI  LQE          
Sbjct: 1   MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LDLEGYFQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  + ++++ ++  +     +                  L         S  
Sbjct: 91  -----VITLEFEDLFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                         D + T+  +  +  F           
Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +           IDYF++  N    + + S    +             SDHCP+
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEIL-----------GSDHCPV 245


>gi|20092035|ref|NP_618110.1| hypothetical protein MA3219 [Methanosarcina acetivorans C2A]
 gi|19917247|gb|AAM06590.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 330

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/331 (13%), Positives = 105/331 (31%), Gaps = 55/331 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80
           K+R+ ++N+  L          N          ++R   + ++ADI+ LQE+     V  
Sbjct: 2   KLRIATFNLENL-----DFQKSNKEPTLEERIAVMRPQLQRVNADILCLQEVNGQEEVGH 56

Query: 81  ------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +   K+T    ++    ++       ++ +  I  R + +   Q  +    A 
Sbjct: 57  PRRLLALEALLKDTQYASFNRVSTVDEGGSQVYDERNLVILSRCEILEHHQYKHNFASAP 116

Query: 135 ---------------DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                           +      R  +   +++  K + V+++HLKS             
Sbjct: 117 LYRIVTAIANGGEEQTAKEITWERPILHAKIKVGEKVMDVINLHLKSKIPTYIPGQKLDN 176

Query: 180 ---------------SCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNND 222
                          S      QA   +  I     K      V+ GDFN + + +    
Sbjct: 177 YTWKTASGWAEGFFISSMKRVGQALEARMLIDDLFNKTENPWIVVCGDFNSEFDDVPVEA 236

Query: 223 DFWKTIDPNDS-------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
              +  +  +                +S   +  +      +D+ ++ ++   +      
Sbjct: 237 IRGRVENTGNGELARRIMFPCEMSIPESTRFSLYHQGKGNMLDHLLVCRDMLAYYKGSEV 296

Query: 276 S-EILYNEDDIKSRGKRL--SDHCPISIDYD 303
             E+L++E    +   +   SDH P+  +++
Sbjct: 297 HNELLHDESIAFATDIKFPESDHSPVIAEFE 327


>gi|146299724|ref|YP_001194315.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101]
 gi|146154142|gb|ABQ04996.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101]
          Length = 258

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 83/303 (27%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++      DIV LQE+ +       
Sbjct: 1   MKIATYNVNGING----------------RLNVLLRWLDEAAPDIVCLQELKAPQD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++           +A+  +N+++ + +  L G  +        
Sbjct: 41  ------NFPLKAINDAGYNAVWHGQKQWNGVAILARNMKIEEITRTLPGDDEDVQSR--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +   ING  I +  ++L +   +   +  Y        +    L +         V
Sbjct: 92  ---YIEALING--IVIACLYLPNGNPVPGPKFEYK------LKWFDRLAERAAILLSLKV 140

Query: 204 PFVIAGDFNRKINYLG---NNDDFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P ++ GD+N     L            +   +                 +          
Sbjct: 141 PVLLIGDYNVMPTELDVYKPEKWINDALFKPEIRKAFAAIVSQGWTDAIRTLYPDEKIYT 200

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + ID+F++       L            D      ++ SDH P+ I
Sbjct: 201 FWDYFRNAYQRNAGLRIDHFLLSPQIASALHSGGV-------DRHVRGWEKTSDHAPVWI 253

Query: 301 DYD 303
             D
Sbjct: 254 QID 256


>gi|297539760|ref|YP_003675529.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301]
 gi|297259107|gb|ADI30952.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301]
          Length = 262

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 82/307 (26%), Gaps = 75/307 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           ++++S N+N +                      ++ + +  +AD+V +QE+ +  A    
Sbjct: 1   MKIISLNLNGIRSATNKG---------------VQTWLQTQNADVVCMQEIKAQQADMTP 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  ++       +S               K     + +             + 
Sbjct: 46  EMLNPAGYYGYFHYAEKKGYSGVGI---------YCKAKPDAVIEGLGGSNDGVQDIDSE 96

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +E     + V+ ++L S    +  +       +      Q L        +S
Sbjct: 97  GRY-----LECQFGNLSVISLYLPSGSSGEERQAFKFSVMTRFMLHMQAL-------IKS 144

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               +I GD+N                                D    +  +     +  
Sbjct: 145 GREIIICGDWNIAHKEADLKNYKGNKKNSGFLPEERAWLTTLFDEVGWVDVYRTLHPNTT 204

Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +       N+           IDY +         +  S             + +R SDH
Sbjct: 205 DECYTWWSNRGQAYAKNVGWRIDYQIATPAIAAKAVSTSV-----------YKAERFSDH 253

Query: 296 CPISIDY 302
            P+ ++Y
Sbjct: 254 APLIVEY 260


>gi|315635841|ref|ZP_07891103.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22]
 gi|315479820|gb|EFU70491.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22]
          Length = 313

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 101/324 (31%), Gaps = 56/324 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79
           K+R+ ++N+            K            +         ++ DIV  QE+ S + 
Sbjct: 2   KLRVGTFNLFQFCSPPFSFYTKKEKFTPEEWNEKIAWCKNQLNLMNCDIVGFQEVFSNDE 61

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +  +  +  +  ++         K++    I T +A+  K   +  +        D+ S 
Sbjct: 62  LKSLCLEVGFK-YFEVVDFAKVDKKNEKVYISTTVAIASKFPIINIEKI------DTKSF 114

Query: 140 AGNRRAVELLVEING-KKIWVLDIHLKSFCFLD--------------------SLENTYS 178
              R  ++ ++ +   K I V   HLKS    +                    +L++ YS
Sbjct: 115 KFARIPIKAIISLPNEKNITVYITHLKSNRENEFEYIFTKNDTLEDKLKKVEVALKDNYS 174

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR-----KINYLGNNDDFWKTIDPNDS 233
            S      +A+ L   I     +  P ++  D N       I+ L N   + K +  +D 
Sbjct: 175 LSLKQRINEAKILFYDIK---SNKTPTILMCDLNDKEFSITIDALTNKRFYNKNLKKDDY 231

Query: 234 LIRFPKEKDSR--------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
           L+                          +        +DY  + +         S+  + 
Sbjct: 232 LLFDAYYLHKPKIYNPHPEFKGIKRTPTSYFAGKGNILDYIFVSKELQ---KISSYEVLD 288

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
            +     +   + SDH  +  + +
Sbjct: 289 KHLQKNHNGSLKQSDHAQVVCEIE 312


>gi|299143331|ref|ZP_07036411.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517816|gb|EFI41555.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 250

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L          +                  ++AD+  LQE+         
Sbjct: 1   MKLVSWNVNGLRAVIKKGFVDS---------------FNEINADVFALQEIKLSEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    + ++             +    ++  A+  +   +       +   D+  R    
Sbjct: 45  FELEGYKMY----------YNYAQRKGYSGTAIFTRIEPISVSYGIGMEEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +K + +  +  +                +       L++          
Sbjct: 91  -----VITAEFEKFYFVTCYTPNSKRGLERLEYRMVWEDVFRNYLNKLRE--------TK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N     +                     +  +  +  +  F      R +  
Sbjct: 138 PVVLCGDLNVAHEEIDLANPATNHKNAGFTNEERSKFTELLKSGYIDTFRYFYPDRKDEY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N            IDYFV+ +     L      + +             SDHCP+ 
Sbjct: 198 SWWSNFAKSRERNIGWRIDYFVVSEELKGNLSDAKIHQSV-----------MGSDHCPVE 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 LVLE 250


>gi|298293365|ref|YP_003695304.1| exodeoxyribonuclease III [Starkeya novella DSM 506]
 gi|296929876|gb|ADH90685.1| exodeoxyribonuclease III [Starkeya novella DSM 506]
          Length = 272

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/308 (9%), Positives = 69/308 (22%), Gaps = 65/308 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + +WNIN                       L+ + A     D++ LQE  + +    
Sbjct: 2   PLTIATWNIN----------------SVRLRIGLVEKLAAEYQPDVICLQETKTPDDRFP 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     +   ++                +  +A+  K               D+      
Sbjct: 46  LKDAAKFGYPHAAIH---------GQKGYHGVAILSKRPFDQVSRQGFCDIGDA------ 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKES 201
           R     L    G +  +   +       D  +   +               W     ++ 
Sbjct: 91  RHICVTLGREAGLEAPLTIHNFYIPAGGDIPDPALNEKFRHKLAFLDEATMWEQLHPEDP 150

Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEK-DSRC 245
               V+ GD N                  ++     +  + +      +   +       
Sbjct: 151 TARSVLVGDLNIAPLETDVWSHKQLLDVVSHTPIEVEKLEKLQAAGRWVDVMRNFVPPDE 210

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+              +               +R SDH
Sbjct: 211 RLYTWWSYRAADWEASNRGRRLDHVWATPAFAPTARAMNVV-------RAARSWERPSDH 263

Query: 296 CPISIDYD 303
            P+ + +D
Sbjct: 264 VPVVVTFD 271


>gi|294626440|ref|ZP_06705040.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292599239|gb|EFF43376.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 259

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+      D+V +QE  +  +    
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLAAFAPDVVGIQETKLEDHKFPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +   +                 +  +A+  ++  V  Q               
Sbjct: 45  AALAALGYRSVFC------------GQKTYNGVAILSRSPAVDVQ-----MGIPGLDDVQ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +      DWI Q+ + 
Sbjct: 88  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQR 136

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246
               V+ GDFN   +    +D         +   D            L    +  +    
Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAE 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        ++          D      +R SDH P
Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDTLCARAVESGI-------DREPRTWERPSDHAP 249

Query: 298 ISIDY 302
             +  
Sbjct: 250 AWVRL 254


>gi|148259431|ref|YP_001233558.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5]
 gi|146401112|gb|ABQ29639.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5]
          Length = 267

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 73/305 (23%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                       LL         DIV LQE         +
Sbjct: 4   LTVATWNIN----------------SVRLRRDLLHSLMDQAAPDIVCLQE---TKVPDDL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP++          L            +  +A+  +      +  P    K         
Sbjct: 45  FPEDL------GTALGLPHVLKRGMKGYNGVAILSRLPLTAVEDTPDWCMKSDCRH---- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++     + + + ++ +    D  +   +P            +D     +    
Sbjct: 95  --IAARIDTGTDPLVLHNFYVPAG--GDIPDRAENPKYGHKLDFIAEARDHFAMNRPHRT 150

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                  ++     +          +              
Sbjct: 151 --MLVGDLNIAPLENDVWSHKQLLNVVSHTPPETEGLNAWRTEGFIDAIRHFVPDDQKLF 208

Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+  +  +    L + +  +            +R SDH P+
Sbjct: 209 TWWSYRNRDWRASNRGRRLDHIWVSTDLIGNLARHAILQD-------ARDWERGSDHVPV 261

Query: 299 SIDYD 303
            +  D
Sbjct: 262 VLTLD 266


>gi|57505734|ref|ZP_00371660.1| exodeoxyribonuclease III [Campylobacter upsaliensis RM3195]
 gi|57016007|gb|EAL52795.1| exodeoxyribonuclease III [Campylobacter upsaliensis RM3195]
          Length = 252

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNIN L                        ++ +    D +  QE+    A    
Sbjct: 1   MKLLSWNINGLRAICDKGG---------------LEWLREEKIDFIGFQEI---KASEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +          ++        + F     R
Sbjct: 43  FPKKIYEFPFKHMYFNSAKRA-----GYSGVMSLCNFESETKK-------CEFFDDDEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E N   I + +I+  +    +          +   +       ++ +  +   
Sbjct: 91  -----VLEHNFNNIVLFNIYFPNGQKDEER-------LNHKMKFYADFLAYLNKLLKEGK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EVIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLALGFIDTFREINGDIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L        ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKSKLKNAFIKNDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IELD 251


>gi|313109621|ref|ZP_07795568.1| putative nuclease [Pseudomonas aeruginosa 39016]
 gi|310882070|gb|EFQ40664.1| putative nuclease [Pseudomonas aeruginosa 39016]
          Length = 266

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ ++N+N                   +    L  + +    DIV LQE+ + +A  
Sbjct: 2   DTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  ++ + L+    L G         
Sbjct: 44  --------RFPAAALEKAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV          + V  ++L +       +  Y  +        + L     +  ES
Sbjct: 96  LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMES 141

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+AGDFN   +     D               + ++ +     +    +    R  
Sbjct: 142 GHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRI 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ ++  +    L            D      +  SDH P 
Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254

Query: 299 SIDY 302
            +  
Sbjct: 255 WVSL 258


>gi|229032715|ref|ZP_04188676.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
 gi|228728610|gb|EEL79625.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
          Length = 337

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 107/324 (33%), Gaps = 64/324 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 35  APDNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 94

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVR 117
           LQE+   +   + F  N              S   + +                  ++  
Sbjct: 95  LQEVDIKSL--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 152

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLDSLE 174
            K      + + L G +    R  +  R  VE  + +N  K   ++++HL +        
Sbjct: 153 SKYKVQTAERFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA-------- 204

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  QQ ++LK+++ +  E+    ++ GD+N+ ++ +  +D  +    P   +
Sbjct: 205 --YDEGGKIRKQQVEFLKEYMNKHYENGDYVIMGGDWNQLLSDVQLSDPKFVKERPEWLV 262

Query: 235 IRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESFSEI 278
                  +       +                      ID F++  N    ++     ++
Sbjct: 263 ELPKNFTNGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQGKDL 320

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +            SDH P+S  +
Sbjct: 321 KFEN----------SDHNPVSAVF 334


>gi|149246874|ref|XP_001527862.1| hypothetical protein LELG_00382 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146447816|gb|EDK42204.1| hypothetical protein LELG_00382 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 842

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/326 (13%), Positives = 81/326 (24%), Gaps = 42/326 (12%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           S +    ++S+N      +  +      +           L +       DI+ +QE+ +
Sbjct: 508 SSSNLFTMLSYNTLCQHYATPKMYKFTPSWALNWEYRRNALEKEILQYGTDIICMQEVET 567

Query: 77  YNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---- 128
                   P  +   +     +  R    ++ DS      A   +     ++ +      
Sbjct: 568 RTFTEFWLPLLSQKGYKGLFLNKTRSKTMNENDSKKVDGCATFYKVDKFTLVHKQNFEYN 627

Query: 129 -------PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLENT 176
                       KD F+R  N+        L  +  G+KI  ++ HL     F D     
Sbjct: 628 SVCMGSEKYKKTKDIFNRFMNKDNVALISYLQHKETGEKICFVNTHLHWDPAFNDVKTLQ 687

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDFWKTIDP 230
                  L    +  +   + ++      VI GDFN                   + +  
Sbjct: 688 IGILLEELQGIIKRYQHTSSMEEVKNSSLVICGDFNSVKESAVYQLFSTGSSQSHEDMAD 747

Query: 231 NDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD-QNAYKFLIQESFS 276
            D                            N        IDY            +     
Sbjct: 748 RDYGKFTESGFHHPFKLKSAYEPVGELPFTNLTPAFTDNIDYIWYSTSTLGVKGLLGKVD 807

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
           E   +           SDH PI   +
Sbjct: 808 EEYASNCIGFPDANFPSDHVPILAKF 833


>gi|260460592|ref|ZP_05808843.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
 gi|259033697|gb|EEW34957.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
          Length = 305

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/333 (13%), Positives = 81/333 (24%), Gaps = 89/333 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           ++LVS+NI      +G             D +   +      ADI+ LQE+         
Sbjct: 1   MKLVSYNIQYGFGSDG-----------RYDLSRAARIVA--GADIIALQEVERHWQRSNF 47

Query: 75  -GSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                 ++++ P   W     +  +       R  N        V  K      + + L 
Sbjct: 48  DDQPELLSRLLPDYHWVYGPAFDMDASERRDGRLVNRRRQFGTMVLSKLPIAWSRLHALP 107

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +          A+E ++      + VL +HL               +     +Q  +L
Sbjct: 108 MRRTLRPLNTRNAALECMIRTPAGPLRVLSLHLAH------------IAAEERLEQIDYL 155

Query: 192 KDWITQKKESLVPF------------------------VIAGDFNRKINYLGNNDDFW-- 225
                +      P+                        +  GDFN +             
Sbjct: 156 LAQHRRAPSEGGPWSGADDEPSRNWTSGEAEPENPLAAIWMGDFNMEPGSAEYRRIVGST 215

Query: 226 ------KTIDPNDSLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFL 270
                   +D          E     +                   +D+  +       +
Sbjct: 216 PYHRGAAYLDGFVDAAAVASEPVLDFHTRDFHTHVKTIDGKLTNRRLDHCFVGGMFAGRV 275

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                             G+  SDH P+ ID D
Sbjct: 276 RSVGADI-----------GEVASDHFPLRIDID 297


>gi|317061856|ref|ZP_07926341.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12]
 gi|313687532|gb|EFS24367.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12]
          Length = 260

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 77/283 (27%), Gaps = 41/283 (14%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ S+N   L               +  DY L  +  +  D D+V L+E+    AV  + 
Sbjct: 9   KVASFNTLHLGT-------------SKKDYKLFCETIR--DFDLVGLEEVMKKEAVENLV 53

Query: 85  PKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            +            +  H+  ++  +       +K  V++++Q                R
Sbjct: 54  KELNKNTGSIWEGHISQHAVGENGYNEFYGYVWKKDKVKLIKQEGFYPDP----DNKFVR 109

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
                  +I       +  H                       +A  L       ++   
Sbjct: 110 EPYGATFKIGNFDFTFVLQHAVYG-----------KKVLERKLEAAELVKVYDYFQDRDI 158

Query: 203 --VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                +IAGDFN         D  +   D     +    +                 D  
Sbjct: 159 KENDILIAGDFNLS-ASDKAFDSLYNHRDNITCTLDPKTKTTVGTKGLS-----SAYDNI 212

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + +        +S     +         K++SDH PI I+ +
Sbjct: 213 FISKKYTTEYTGKSGIVD-FTNKKYGEARKKISDHLPIYIEVN 254


>gi|260779533|ref|ZP_05888423.1| extracellular nuclease-related protein [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604342|gb|EEX30646.1| extracellular nuclease-related protein [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 865

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 101/373 (27%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R              +      LDADI+ L E
Sbjct: 470 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANSFEEFEVQQAKIVNAILRLDADIIGLME 529

Query: 74  MGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNND------------IHTAIAV 116
           + +       A+ ++  +    I    +R    +   + +             I T +  
Sbjct: 530 IENNGFGDSGAIRQLVEQLNQRIDKKKDRYDFVAVDSNGDKVTDENDSIGTDVITTGVIY 589

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEING--KKIWVLDI 162
           R K  ++ +     + ++                +   R ++    +I G  +KI V   
Sbjct: 590 RSKVAKLKEVRVIEMPSQQAPEVLDDDGKVIEDGKNYQRNSLAPTFKIKGTDEKITVAIN 649

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202
           H KS                      +      +     A  L D + + K         
Sbjct: 650 HFKSKGSKCWEDAAPVDQGGQGGVDADQQGSCENFRVAAAVALGDALKEIKGHKVILGDL 709

Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  P ++  D+             N  I       D    I    + I     K  
Sbjct: 710 NSYGMEDPMLVLTDYSEEKYGKQIKAARNTFIGDTEQFGDHGAVITEGYNYINAVAMKHP 769

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +  K  +  +   I   E  +                  
Sbjct: 770 NSWSYSYNDEVGALDHLLISPSLKKHFVDATDWHINGGESTLFDYNDEYKGDLPKYNDHF 829

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 830 RSSDHDPAVLELN 842


>gi|84516350|ref|ZP_01003710.1| exodeoxyribonuclease III [Loktanella vestfoldensis SKA53]
 gi|84510046|gb|EAQ06503.1| exodeoxyribonuclease III [Loktanella vestfoldensis SKA53]
          Length = 259

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 81/302 (26%), Gaps = 68/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN                   +    L  +  +   D+  LQE+ S +     
Sbjct: 1   MKIATFNING----------------VKARIETLCDWLDDSAPDVAILQEIKSVDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            ++           +A+  K               D  +R    
Sbjct: 41  ------GFPRQLIEDRGYTLETHGQKGFNGVAILSKLPLEDVTRGLPGDDADEQARW--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  V +    + +  ++L +       +  Y  +        + L    T      +
Sbjct: 92  --IEATV-VGDVAVRICGLYLPNGNPAPGPKFDYKLA------WMERLLARATALLADEM 142

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++AGD+N                       +   + + ++   +      E  +   +
Sbjct: 143 PALMAGDYNIIPQGMDAARPQVWRDDALFRPESRAAYRRILNLGFTEAFRTLEPGAGHYS 202

Query: 248 NKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +         N I ID+F++       L                    + SDH P+ +
Sbjct: 203 FWDYQAGAWEKNNGIRIDHFLLTPQCADLLAGAWIE-------KDLRARDKPSDHVPVWV 255

Query: 301 DY 302
           + 
Sbjct: 256 EL 257


>gi|296269289|ref|YP_003651921.1| endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM
           43833]
 gi|296092076|gb|ADG88028.1| Endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM
           43833]
          Length = 246

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 73/280 (26%), Gaps = 54/280 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+ +L +                D   L +  K L  D++ LQEM       + 
Sbjct: 2   LRVATYNVRSLRD----------------DRAALVRMIKALRPDVLCLQEMPRLPGRRRA 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           + +       +                   +             + L      F+    R
Sbjct: 46  WRELAALTGMTIAAGCRAGGVAVFAGPGLRVV------------HGLGRPLRRFTGLERR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +VE +G +      HL                 + L   A+ +       +    
Sbjct: 94  AIALAVVERSGARYAACSFHL------------DLVGEARLRHAAEIVPAVEGAARAFGA 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V+AGD N + +        W+ +              +      + R +  ID    D
Sbjct: 142 HAVLAGDVNEEPDGP-----VWRYL-AGRYTDCLAAAAGATGGTFPSPRPRARIDGIFAD 195

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +         +   I            R SDH P+     
Sbjct: 196 RGLRVVSCAVAAEPIHDVV--------RASDHRPVVAVLT 227


>gi|260173107|ref|ZP_05759519.1| hypothetical protein BacD2_14655 [Bacteroides sp. D2]
 gi|315921383|ref|ZP_07917623.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695258|gb|EFS32093.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 361

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 87/305 (28%), Gaps = 67/305 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+ + S  E                  +  Y  N +ADI+ LQE  +     
Sbjct: 99  GSIKILSYNVMSFSNLEKKDGKNP-----------ILSYLANSNADIICLQEYNTATNKK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  ++      +      H +          +A   K   +           +   R  
Sbjct: 148 YLTEQDVKKALKAYPYQSIHQQG----KGDVQLACFSKFPILSIHPIEYKSNYNGSMRY- 202

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
                  ++ +N   + +++ HL+S          Y                        
Sbjct: 203 -------VLNVNNDTLTLINNHLESNKLTKEDRGIYEDMIKDPNAKKVKTGLRQLIRKLT 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ + QA  +   I + K      ++ GDFN   +    +    + +D       F 
Sbjct: 256 EASAIRASQADSVARVIAESKYPTT--IVCGDFNDG-SISYTHRILTQELDD-----AFT 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  N   +             +    R  + SDH PI
Sbjct: 308 QSGKGLGISYNLNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 354

Query: 299 SIDYD 303
                
Sbjct: 355 WCYIS 359


>gi|229550274|ref|ZP_04438999.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis ATCC 29200]
 gi|255973048|ref|ZP_05423634.1| predicted protein [Enterococcus faecalis T1]
 gi|300859716|ref|ZP_07105804.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TUSoD Ef11]
 gi|307274440|ref|ZP_07555623.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2134]
 gi|229304537|gb|EEN70533.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis ATCC 29200]
 gi|255964066|gb|EET96542.1| predicted protein [Enterococcus faecalis T1]
 gi|300850534|gb|EFK78283.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TUSoD Ef11]
 gi|306508834|gb|EFM77921.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2134]
 gi|315157326|gb|EFU01343.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0043]
 gi|315158389|gb|EFU02406.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0312]
 gi|327534861|gb|AEA93695.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis OG1RF]
          Length = 254

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ ++ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKIQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           Q      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|159045260|ref|YP_001534054.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter
           shibae DFL 12]
 gi|157913020|gb|ABV94453.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter
           shibae DFL 12]
          Length = 375

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 43/377 (11%), Positives = 95/377 (25%), Gaps = 101/377 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVK---------------------------------- 48
           K RL ++NI  L  +   S + +                                     
Sbjct: 3   KFRLCTFNIENLFTRFNFSGFSDPDAARYLSPIVQFYGDYGDDDLSKFAAFKRMVETAAI 62

Query: 49  -RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
            +               DA +  LQE+  ++ + +            +       + +  
Sbjct: 63  AQDDDKRQQTALAIAEADAHLYCLQEVDGFDPLTRFLEAYVKKTMGESFHNRVLHEGNDP 122

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGA-----------------------KDSFSRAGNRR 144
             I  A    ++     +    L G+                           +R   R 
Sbjct: 123 RGIDVAAISVRRFPFYSRSHAWLTGSVIDNTETGRALLDAYPLARGRARSLRSARVFRRD 182

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +EL+V +    + + + H KS    D+       S +    +A  +++ IT+K      
Sbjct: 183 CLELVVPVGDGTLTLYNCHFKSMGGRDAE-----KSLATRQTEAILVRELITRKFPDPAA 237

Query: 205 FV--IAGDFNR-----------------------KINYLGNNDDFWKTIDPNDSLIRFPK 239
            +  I GD N                        +     +       ++    +     
Sbjct: 238 GLWAICGDLNDALSYRFVSSVRQADGSFAESLRDRPPSGEDASGVAPLLEDGFGINLVAA 297

Query: 240 EKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESF--------SEILYNEDDIKSRG 289
             ++    +     +    +DY +        +                  +       G
Sbjct: 298 LPEAARWTHYYAGGRSKTQLDYVIASPALAARVRSTPEIIRTGMPQRVPNLDTPRYPRIG 357

Query: 290 K---RLSDHCPISIDYD 303
               + SDHCP+ +++D
Sbjct: 358 WDRPKASDHCPVVVEFD 374


>gi|152987919|ref|YP_001346307.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7]
 gi|150963077|gb|ABR85102.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7]
          Length = 261

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 82/304 (26%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ ++N+N                   +    L  + +    DIV LQE+ + +A  
Sbjct: 2   GTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  ++ + L+    L G         
Sbjct: 44  --------RFPAAALEKAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV          + V  ++L +       +  Y  +        + L     +  +S
Sbjct: 96  LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMKS 141

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+AGDFN   +     D               + ++ +     +    +    R  
Sbjct: 142 GHPVVLAGDFNVVPSNFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRL 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ ++  +    L            D      +  SDH P 
Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254

Query: 299 SIDY 302
            +  
Sbjct: 255 WVSL 258


>gi|126699766|ref|YP_001088663.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile 630]
 gi|254975745|ref|ZP_05272217.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile QCD-66c26]
 gi|255093132|ref|ZP_05322610.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile CIP 107932]
 gi|255307161|ref|ZP_05351332.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile ATCC 43255]
 gi|255314874|ref|ZP_05356457.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile QCD-76w55]
 gi|255517548|ref|ZP_05385224.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile QCD-97b34]
 gi|255650659|ref|ZP_05397561.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile QCD-37x79]
 gi|260683749|ref|YP_003215034.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile CD196]
 gi|260687409|ref|YP_003218543.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile R20291]
 gi|306520587|ref|ZP_07406934.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile QCD-32g58]
 gi|115251203|emb|CAJ69034.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile]
 gi|260209912|emb|CBA63862.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile CD196]
 gi|260213426|emb|CBE05082.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile R20291]
          Length = 209

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 86/276 (31%), Gaps = 70/276 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V++NI+           K          T +  Y K LD D++ LQE+     +A  
Sbjct: 1   MKIVTYNIH-----------KGMDSNNRLTLTKMGLYLKQLDCDVICLQEVLYPQFLALK 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N   +F +  + +N                                     S+   R
Sbjct: 50  AVLNMDGVFATNVKKVNMIYG---------------ICTFTTSKMLNSNHFFLTSKKEQR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+ + ++  G+ I V++ HL                     ++A+ L + I  +   + 
Sbjct: 95  GALCITIDAYGRIINVINTHLGLD----------------RQERAKQLDEIIDYRNRLVG 138

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++ GDFN K  +L   +D   +++                      ++   IDY  ++
Sbjct: 139 IVILCGDFNEKNVFLSMFNDMAISLNK--------------SYLPTFEKSNSRIDYIFVN 184

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +N                          LSDH P+ 
Sbjct: 185 KNTELK--------------GYTVEKIYLSDHYPVI 206


>gi|2462635|emb|CAA04665.1| deoxyribonuclease I [Oreochromis mossambicus]
          Length = 284

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 87/278 (31%), Gaps = 28/278 (10%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKVFPKN 87
           +NI +           ++     +   ++ +  K    D++ +QE+  S  +  +     
Sbjct: 32  FNIKSFG---------DTKASNATLMNIITKIVKRY--DVILIQEVRDSDLSATQTLMNY 80

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
                   + +++     S          R+  V V++      G +++     +R    
Sbjct: 81  VNKDSPQYKYIVSEPLGASTYKERYLFLYREALVSVVKSYTYDDGPEETGQDTFSREPFV 140

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           ++       +    +  +      ++    +    +L  +A+W          +    V+
Sbjct: 141 VMFSSKNTAVKDFTLIPQHTSPDLAVRELNALYDVVLDVRARW----------NTNDIVL 190

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
            GDFN   +Y+  +      I  + +      +      +          D  V+  +  
Sbjct: 191 LGDFNAGCSYVSGSAWQQIRIFTDKTFHWLITDAADTTVSQTVCPY----DRIVVTTDMM 246

Query: 268 KFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303
           + ++Q S     Y  D    +   L  SDH P+ +   
Sbjct: 247 RGVVQNSAKVYNYMTDLNLKQDLALAVSDHFPVEVKLS 284


>gi|325205029|gb|ADZ00483.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240355]
          Length = 259

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 80/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 47  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +           +   K    
Sbjct: 95  F-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYCFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNVAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|319948930|ref|ZP_08023037.1| exodeoxyribonuclease III Xth [Dietzia cinnamea P4]
 gi|319437410|gb|EFV92423.1| exodeoxyribonuclease III Xth [Dietzia cinnamea P4]
          Length = 284

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 83/311 (26%), Gaps = 55/311 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A  + + + N+N +             +R+ ++   L  + ++  AD+V LQE+ +   
Sbjct: 2   AAVSLTVSTVNVNGIRA--------AVKQRSETNLGFL-PWLESSGADVVALQEVRADED 52

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +          +            S+      +A+  +           +G  D    
Sbjct: 53  QTRKALAPALDAGWH------LIGSASSMKGRAGVALLSRQESSDV----CVGYGDPEFA 102

Query: 140 AGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              R    +    ++G+ + V  ++L S       ++          +        +   
Sbjct: 103 ESGRYIEAVYPGAVDGETVTVASLYLPSGSANTPKQDEKDRFLKTFREFLAERAAELK-- 160

Query: 199 KESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPN-DSLIRFPKEK 241
                  +I GD+N                         +                   +
Sbjct: 161 SREGHEMIICGDWNIAHREEDLKNHKGNHKSSGFLPHEREWMTDVFADGSGWTDIVRHRR 220

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY V+        +++         D  ++   R 
Sbjct: 221 PDEVGPYSWWSQRGKAFDNDAGWRIDYQVVSDGLVDRAVKDWV-------DRAEAYDMRW 273

Query: 293 SDHCPISIDYD 303
           SDH P+++ Y+
Sbjct: 274 SDHAPVTVVYE 284


>gi|296387271|ref|ZP_06876770.1| putative exonuclease III [Pseudomonas aeruginosa PAb1]
          Length = 266

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ ++N+N                   +    L  + +    DIV LQE+ + +A  
Sbjct: 2   DTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  ++ + L+    L G         
Sbjct: 44  --------RFPAAALERAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV          + V  ++L +       +  Y  +        + L     +  ES
Sbjct: 96  LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMES 141

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+AGDFN   +     D               + ++ +     +    +    R  
Sbjct: 142 GHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRL 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ ++  +    L            D      +  SDH P 
Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254

Query: 299 SIDY 302
            +  
Sbjct: 255 WVSL 258


>gi|260896624|ref|ZP_05905120.1| nuclease [Vibrio parahaemolyticus Peru-466]
 gi|308086332|gb|EFO36027.1| nuclease [Vibrio parahaemolyticus Peru-466]
          Length = 984

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 43/382 (11%), Positives = 94/382 (24%), Gaps = 96/382 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65
              A     +R+ S+N+         S   N   +                +      +D
Sbjct: 466 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 525

Query: 66  ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111
           ADI+ L E+ +      +AV  +            + +      ++     +   ++ I 
Sbjct: 526 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 585

Query: 112 TAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--N 153
            AI  R K V                     +       +       R ++     +  +
Sbjct: 586 VAILYRAKVVTPKEAAKVIFTPEQHIAENTITRKDGAESNPAYDKYQRHSLLQTFTVQES 645

Query: 154 GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           G+ + ++  H KS                   +      +     A  + + +   K   
Sbjct: 646 GEDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKDVKGD- 704

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL------------- 234
              ++ GD N                           + TI+  +               
Sbjct: 705 --VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAGYTTINGGELQVEQTQIKQGYGLN 762

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
                   +   +         +DY +   +  + ++      I   E ++   G +   
Sbjct: 763 NLNTLLHGTDTFSYTYSGELGNLDYALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTG 822

Query: 292 ----------LSDHCPISIDYD 303
                      SDH P+ I  D
Sbjct: 823 DMPKYKDAFSASDHDPVIIAID 844


>gi|255656137|ref|ZP_05401546.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile QCD-23m63]
 gi|296450430|ref|ZP_06892186.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP08]
 gi|296879447|ref|ZP_06903441.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP07]
 gi|296260691|gb|EFH07530.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP08]
 gi|296429593|gb|EFH15446.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP07]
          Length = 209

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 90/276 (32%), Gaps = 70/276 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V++NI+           K          T +  Y K L+ D++ LQE+     +A  
Sbjct: 1   MKIVTYNIH-----------KGMDSNNRLTLTKMGLYLKQLNCDVICLQEVLYPQFLALK 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N   +F +  + +N             I        +    + L        +   R
Sbjct: 50  AVLNMDGVFATNVKKVNMI---------YGICTFTTFKMLNSNHFFLTS------KKEQR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+ + ++  G+ I V++ HL                     ++A+ L + I  +   + 
Sbjct: 95  GALCITIDAYGRIINVINTHLGLD----------------RQERAKQLDEIIDYRNRLVG 138

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V+ GDFN K  +L   +D   +++                  +   ++   IDY  ++
Sbjct: 139 IVVLCGDFNEKNVFLSMFNDMAISLNK--------------SYLSTFEKSNSRIDYIFVN 184

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +N                          LSDH P+ 
Sbjct: 185 KNTELK--------------GYTVEKIYLSDHYPVI 206


>gi|54302544|ref|YP_132537.1| hypothetical protein PBPRB0865 [Photobacterium profundum SS9]
 gi|46915966|emb|CAG22737.1| hypothetical protein PBPRB0865 [Photobacterium profundum SS9]
          Length = 234

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 64/246 (26%), Gaps = 21/246 (8%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +       + DI  LQE  +   +      + +                          V
Sbjct: 1   MTSIFSEQNIDIAGLQEAFNDQIIYLARNLSNYGWVGVGRDDGKTKGEAVPIFYRADKYV 60

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +           P + A   +     R    + +E       VL  +     F    +  
Sbjct: 61  KLGGGTFWLSETPEVVASVGWDADLTRITSWVRLEDKESSKRVLVFNAH---FDHIGKVA 117

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
              S  LLS++A+ +        +     ++ GD N + + + + +      +   S   
Sbjct: 118 RQQSAKLLSKKAKEIIG------DDNDAVIVLGDLNFERSDVASYEALTSLFNDARSTTI 171

Query: 237 FPKEKDSR---CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            P E              +    IDY  ++                +   +I   G   S
Sbjct: 172 KPFEGIDGKEYTYHGYFKKPTEDIDYIFVNDKL---------RVNTFKYVNIIKDGIYSS 222

Query: 294 DHCPIS 299
           DH  + 
Sbjct: 223 DHLSVI 228


>gi|152967922|ref|YP_001363706.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216]
 gi|151362439|gb|ABS05442.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216]
          Length = 273

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 74/272 (27%), Gaps = 51/272 (18%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           +  +    D D++ LQE+ + +A + K  P         +   + H++  +      A+A
Sbjct: 25  MHSWLDARDPDVLLLQEVRAPDAELRKALP---------SYPHVAHTEAAAKGRAGVAVA 75

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
            R +   V          + S         +E+ V+     + ++  ++ S       + 
Sbjct: 76  TRSEFTAVRIGFAHDPHFETSGRW------IEVDVDTAIGPMTLVSTYVHSGEVGTPQQE 129

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------ 223
                   +  +   L     +   +    ++AGD N         +             
Sbjct: 130 DKHRFLDAMDVRFAELGAIAAE---TGREALVAGDLNVGHTERDIKNWKGNRGKAGFLED 186

Query: 224 ----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270
               F         +    +              +           IDY ++       L
Sbjct: 187 ERAHFDHWFGDLGWVDTQREVAGDVDGPYAWWSWRGQAFDNDTGWRIDYQLVTPGLGARL 246

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       D   S  +R SDH P+   Y
Sbjct: 247 QGV-------ETDRAASYAERFSDHAPVVATY 271


>gi|320094719|ref|ZP_08026473.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319978361|gb|EFW09950.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 274

 Score = 82.3 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 85/311 (27%), Gaps = 72/311 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N++  +   +                  + +    D++ +QE     A    
Sbjct: 1   MRIATWNVNSIRARAARATA----------------FLERSGTDVLAMQETKCTPA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +AV  ++  +    +               
Sbjct: 41  ------QFPAEAFEEAGYHVAVHGLNQWNGVAVASRHPILRVHDHFPGQPAFGDPAVVEA 94

Query: 144 RAVELLVEINGK-----------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           RA+ ++++++G            ++ V  +++ +   LD     Y        +    L+
Sbjct: 95  RALGVVIDVSGALEGAPGSPAPAELTVWSLYVPNGRELDHPHYAYK------LEWLAALR 148

Query: 193 DWITQKKESLVP--FVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSL 234
                  ++       + GD+N                         + F    +     
Sbjct: 149 AQARGWLDADPAALVALVGDWNVAPQDQDVWDMAAFEGATHVSAPEREAFAAFAEDGWIE 208

Query: 235 IRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +  +      + LR      + ID+          +            D  + +GK
Sbjct: 209 ATRARTTNYTYWDYQRLRFPKNEGMRIDFAYASPALEARITSA-------RIDRDERKGK 261

Query: 291 RLSDHCPISID 301
             SDH P+ +D
Sbjct: 262 GASDHVPVILD 272


>gi|315922569|ref|ZP_07918809.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696444|gb|EFS33279.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 314

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 85/288 (29%), Gaps = 37/288 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            +++++S+NI   +  +  +  K+   RT +         +     ++ +QE        
Sbjct: 57  NQIKVMSFNIRYYNTND--TGDKSWDARTAAFIP----MIEEQKPTVIGMQEARPPQLKW 110

Query: 82  KVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                  +       R  N +                 K         P +     +   
Sbjct: 111 LEENWKDYGYIGKGRRANNANNDEFVPIFYRKKAVELVKWDCFWLSETPDVPGSQGWDNT 170

Query: 141 GNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             R A   + +   +GKK + ++ H+     +   ++             + + + +++ 
Sbjct: 171 VPRVATWAIFKHIASGKKFFFINTHIDVGSTIAPGKS------------MEVIVNKMSEL 218

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
               +P ++  DFN++I+     +     +            K S             +D
Sbjct: 219 NPEGLPMLLTADFNKQIDS-DIFNGVKTFMTNVRLSAPVTDSKYSYTGFGTANPY--IVD 275

Query: 259 YFVMD--QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +      +      I + +  I Y           +SDH PI    ++
Sbjct: 276 HIFCTGFKALKFETIDKVYQNITY-----------ISDHYPIVGKLEY 312


>gi|332291109|ref|YP_004429718.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169195|gb|AEE18450.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 341

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 84/306 (27%), Gaps = 57/306 (18%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           ++ +LV             ++++++N+   +        K              Q   + 
Sbjct: 81  HIFSLVRIGGGEDIGDGTTLKVLTYNVRQFNIHGWSDEVKVG--------ERTIQLISDK 132

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           + D+V  QE        +      + +  S  +                  +  K   + 
Sbjct: 133 NPDVVSFQEYYPGFKPDEKVYPYEYKVMKSPSKS-------------FGQVIFSKYPIIN 179

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC--- 181
             S       ++         +   +      + V ++H +SF    +L N    +    
Sbjct: 180 SGSLDFENTGNN--------GIYADIATATDTVRVYNMHFQSFSLSPNLANLQKENSKKL 231

Query: 182 -----SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                    +Q   +  ++  +  S  P ++ GDFN                   D +  
Sbjct: 232 LGRLGQAFEKQETQVAKFLNNEATSPYPVIVTGDFNNSATSYMYRKV------KGDKVDA 285

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           F K               + ID+ ++D++                  + ++    LSDH 
Sbjct: 286 FAKAGSGTGATFWFDIIPLRIDFILVDESL--------------PVTNFETYDVDLSDHK 331

Query: 297 PISIDY 302
           P    +
Sbjct: 332 PSMATF 337


>gi|323492096|ref|ZP_08097258.1| hypothetical protein VIBR0546_14882 [Vibrio brasiliensis LMG 20546]
 gi|323313657|gb|EGA66759.1| hypothetical protein VIBR0546_14882 [Vibrio brasiliensis LMG 20546]
          Length = 869

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 104/373 (27%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G     +   R  + Y         +      LDADI+ L E
Sbjct: 474 GDLRIATFNVLNYFNSPFGGDANPHGDNRGANSYEEFEVQQAKIVNAILRLDADIIGLME 533

Query: 74  MGSYN-----AVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116
           + +       A+ ++  +         + + I          +  +       I T +  
Sbjct: 534 IENNGFGDSGAIRQLVDQLNSRIEKKKDRYDIVAIDSNGDKVTDENDYIGTDVITTGVIY 593

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEING--KKIWVLDI 162
           R K V++ +     + ++                +   R ++    ++ G  +KI V   
Sbjct: 594 RPKVVKLKESRVIPMPSQQAPEVLDDNGKVIEDGKNYQRDSLAPTFKVKGTKEKITVAIN 653

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202
           HLKS                      +      +     A  L D + +           
Sbjct: 654 HLKSKGSKCWEDAAPVEQGGQGGQDLDKQGSCENFRVAAAVALGDALNEIDGHKVILGDL 713

Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  P ++  D+             N  I+      D    I  +   I    +   
Sbjct: 714 NAYGMEDPLLVLTDYSEEKYGKTIKAARNTYIDGQVQFGDEGAVITDSYGYINAVAKAHP 773

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290
              +         +D+ +M  +  K  +  +   I   E  +    +             
Sbjct: 774 NSWSYSYNDEVGALDHLLMSPSLEKHFVDATDWHINGGESKLFDYNEEYKGDLPKYNDHF 833

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 834 RSSDHDPAVLELN 846


>gi|312222242|emb|CBY02182.1| similar to endonuclease/exonuclease/phosphatase family protein
           [Leptosphaeria maculans]
          Length = 327

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 79/308 (25%), Gaps = 22/308 (7%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +    +F  +    +    +R+++ NI   +    +       +R       L  Y    
Sbjct: 9   FFFLAIFIALAMRVNATLPIRMLTHNIRYAASVPFIGEKP-WPERKQLILNQL-HYNTLH 66

Query: 65  DAD-IVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + +  + LQE+     V  +    + W                S       +        
Sbjct: 67  NPEAFICLQEVLHEQLVDILAGLGDEWTHIGVGRDDGKEKGEYSPIVYRKGVWEPTTWQT 126

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           V          K  +     R            K  ++ +        +S       S  
Sbjct: 127 VWLNE-DGSIGKKGWDAGSVRILTVGTFRHRESKEVIVGMSTHL---DNSGMIARRESAK 182

Query: 183 LLSQQAQWLKDWIT-----QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           ++ Q    +                +PF ++GD N +I+          +          
Sbjct: 183 IILQTIDAVTATTNLTNSSFGVRDRLPFFLSGDLNSEID-GEAYQILNNSTASTQDAKDL 241

Query: 238 PKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            K +    N   +  +       ID+  +          E +S +     +    G   S
Sbjct: 242 AKWRYGDTNTFTDFGDNEKRFTLIDFVFVGPRGGTNWDVEGYSVLP----NKFEDGVFSS 297

Query: 294 DHCPISID 301
           DH  + +D
Sbjct: 298 DHRAVVVD 305


>gi|282906344|ref|ZP_06314196.1| LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282330541|gb|EFB60058.1| LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase
           [Staphylococcus aureus subsp. aureus Btn1260]
          Length = 282

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 75/256 (29%), Gaps = 26/256 (10%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE--------RLINHSKRDSNNDIHTAIAV 116
           + D+V   E     A  K+         Y T                  S       +A+
Sbjct: 30  NNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAI 89

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K     +  +        F    N+  V   +E NGK + V+  H +S    DS    
Sbjct: 90  VSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKNVHVIGTHTQS---EDSRCGA 145

Query: 177 YSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                 + ++Q + + D++ +          I GD N          D  K ++ ND L 
Sbjct: 146 GH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN-KGTEEFKDMLKNLNVNDVLY 203

Query: 236 RFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSR 288
                            N        +DY   D++  +   L+ E  +E     D     
Sbjct: 204 AGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFP 263

Query: 289 GKRL----SDHCPISI 300
              +    SDH PI  
Sbjct: 264 YYYVYNDFSDHYPIKA 279


>gi|241759740|ref|ZP_04757840.1| endonuclease/exonuclease/phosphatase [Neisseria flavescens SK114]
 gi|241319748|gb|EER56144.1| endonuclease/exonuclease/phosphatase [Neisseria flavescens SK114]
          Length = 261

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 91/287 (31%), Gaps = 47/287 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---- 75
             + V + S+N++             S          +      L +D++FLQE+     
Sbjct: 2   SPRPVTITSYNMH----------KGMSALNRKVQVNRMADALGALGSDVLFLQEVQGQHL 51

Query: 76  SYNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           + +          + I   S +   ++ K       H   A+  +     + +  +    
Sbjct: 52  NRSHRTNFPDAPHYDIIGDSLDYHRSYGKNAVYPKRHHGNAILSRLPLKTENNLNI---- 107

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S ++   R  +   V   G +  ++ + +                     +Q + + D+
Sbjct: 108 -SVNKLEQRGLLHCEVVPEGWEDPLVCLCVHLNLREPD-----------RLKQYRAISDY 155

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +      P +IAGDFN       +  +  + +D N+    F      R     +    
Sbjct: 156 VGRYIRPESPLIIAGDFNDW--RQKSARELGRALDLNE---VFVDNTGKRPKTFPSRLPI 210

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           + +D                  +++ +E       + LSDH P+S+ 
Sbjct: 211 LSLDRIYTRN-----------LDVIDSEIHNSKDWQHLSDHLPLSVT 246


>gi|294900680|ref|XP_002777063.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
 gi|239884517|gb|EER08879.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
          Length = 320

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/341 (12%), Positives = 89/341 (26%), Gaps = 82/341 (24%)

Query: 19  SVAQKVRLVSWNIN---------------TLSEQEGVSLWKNSVK--------RTTSDYT 55
           S  Q ++++ +NI                 L   +  +    +                 
Sbjct: 2   SQVQHLKVMQYNILGRHFAFSKYFSYAWPYLGGSKAKNFCPAAKDAPQLPTLLDWNMRLP 61

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           +L +   +  ADI+ L EM SY    +      +  +++         R    D  +AI 
Sbjct: 62  MLVKTCLDSSADILCLCEMDSYEDFRQALGS-YYDGYFAP--------RAGGRDDGSAIF 112

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174
            R+  ++++                  R A    ++ + G+   V+  HL          
Sbjct: 113 WRRSILKLMSAKTLHYTGGSE------RVAAICRLQNLYGQTFTVVGTHLYWKG------ 160

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---------DFW 225
                SC   S +   L   +    +   P ++ GD N   +                  
Sbjct: 161 -----SCPTQSHEVDELTTELRAILDRDEPVILCGDLNNHRDSDTFMRIRDCGMEDGFTA 215

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVM---DQNAYKFLIQESFSEIL 279
             + P       P        +            IDY  +     +    ++     +  
Sbjct: 216 AGLKPPRYTSLVPPSYVLSSRSGSYRLLPGREDEIDYIFVGGQSSDLTLKVVDAVAIDSR 275

Query: 280 YNE-----------------DDIKSRGKRLSDHCPISIDYD 303
            +E                 +         SDH P+  + +
Sbjct: 276 NDETGNGVVTGADSRDSSVAERGIPNMSHASDHLPVMCEVE 316


>gi|315605812|ref|ZP_07880844.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312510|gb|EFU60595.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 271

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 80/308 (25%), Gaps = 69/308 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R  +WN+N                   +    +  + +  D DI+ +QE+         
Sbjct: 1   MRFATWNVN----------------SIRTRIDRVIAFLERSDTDILAMQEIKCRPD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +       +    +AV  +      + +               
Sbjct: 41  ------QFPTAPFEEAGYQVAVHGLNQWNGVAVASRLAITDVRDHFPHQPSFGEPATVEA 94

Query: 144 RAVELLVEINGK---------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           RA+ + V++ G           + +  +++ +   LD+    Y             L + 
Sbjct: 95  RALGVTVDVTGVLEAREGSPSSLTIWSLYVPNGRELDNPHYAYKLD------WLATLAEQ 148

Query: 195 ITQKKESLVPFV-IAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRF 237
                      + + GD+N   +                     D F          +  
Sbjct: 149 GRTWLSDSQALIALVGDWNVAPHDEDVWDMSVFEGSTHVSRAERDAFAAFERDGWVEVTR 208

Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            +  +      + LR      + ID+                     + D  + +GK  S
Sbjct: 209 DRVTNYTYWDYQKLRFPKNQGMRIDFAYCSAPLA-------ARVTGAHIDRDERKGKGAS 261

Query: 294 DHCPISID 301
           DH P+ +D
Sbjct: 262 DHVPVIVD 269


>gi|198274048|ref|ZP_03206580.1| hypothetical protein BACPLE_00185 [Bacteroides plebeius DSM 17135]
 gi|198273126|gb|EDY97395.1| hypothetical protein BACPLE_00185 [Bacteroides plebeius DSM 17135]
          Length = 352

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 91/299 (30%), Gaps = 62/299 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MGS 76
            +  + ++ +++N+  +        +             LR+Y +  DAD+V LQE +  
Sbjct: 95  EADGEVMKFLTYNVMHMQGDTEEEGYP------------LRRYIQESDADVVCLQEYLWD 142

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                KVFP   +                        +    +   V  +  P + A ++
Sbjct: 143 EQKTKKVFPMYPYRCLL-------------RASNENGMVCLSRFPIVSVKRIPYVSANNA 189

Query: 137 FSRAGNRRAVEL-----------LVEINGKKIWVLDIHLKSFCFLDSLE----NTYSPSC 181
                 +   +             ++ + K+++   +   +   + S         + + 
Sbjct: 190 SFLLQLKMKEDTLSLVCNHLESNKLDAHDKELYEGLLKSPNEQKVKSDSKYLLRKLADAV 249

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           ++ + QA  +   I+++  S    ++ GDFN       ++               + +  
Sbjct: 250 AIRAPQADSVAQVISRQ--SGKYLLVCGDFNDSPISYAHHTI------GKGLTDAYREAG 301

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +         ID+  + +          F  +    D+  S     SDH P+  
Sbjct: 302 WGPGFSYNRNFLYFRIDHLFVSK---------GFRVLKCRVDNSIS----ASDHYPLWC 347


>gi|163739629|ref|ZP_02147038.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis BS107]
 gi|161387088|gb|EDQ11448.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis BS107]
          Length = 241

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 79/283 (27%), Gaps = 55/283 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              ++RL S+NI            K+             Q  +   AD+V LQE      
Sbjct: 8   QPGRLRLASYNIQ-----------KSVGLDLRRRPRRTLQVIEGTGADLVLLQEADKR-L 55

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +      + +  +  ++++     S      A+  R   + +    +  L        
Sbjct: 56  PPRPAALPHFVLDEAGWQIVDLGGAGSLGWHGNAVIWRGDGIELQDHGHIPLPG------ 109

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R AV  L       + V+  HL                     +Q   L + I +  
Sbjct: 110 LEPRGAVWALFHTGLGPLRVVGAHLGLTT-------------KARHEQVHHLAEVIAR-- 154

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           E  +P V AGDFN       +       + P    +           +   LR    +D 
Sbjct: 155 EPELPTVWAGDFNDW-----SRQPVLDHLAPQLRFV-------PPRASFPALRPMGALDR 202

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +              E++ +           SDH P+  D 
Sbjct: 203 IAVSAGL----------EVVDSGVYRTRPAHIASDHLPVWADL 235


>gi|317476209|ref|ZP_07935460.1| exodeoxyribonuclease III [Bacteroides eggerthii 1_2_48FAA]
 gi|316907620|gb|EFV29323.1| exodeoxyribonuclease III [Bacteroides eggerthii 1_2_48FAA]
          Length = 254

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 86/302 (28%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L                 +    L ++  N   D++ LQE          
Sbjct: 1   MKIITYNVNGLRA---------------AVTKGLPEWLANEQPDVLCLQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +           H    +    ++ +A+  K        +   G       +  R
Sbjct: 38  LQPEQYPAEALDALGYKHYLYSARKKGYSGVAILTKREP----DHVEYGMGMEEYDSEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + ++ ++  S    D  +       +      +  + ++ + + +  
Sbjct: 94  F-----MRADYGDLSIVSVYHPSGTSGDERQ-------AFKMVWLEKFRQYVVELQRTRP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  +D                W T   N+  I   +          
Sbjct: 142 KLILCGDYNICHEAIDIHDPVRNATNSGFLPEEREWMTRFLNEGFIDTFRLLHPDKQEYT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY +++++    L          +           SDHCP+ +
Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVNESVRPMLKDARILNDAVH-----------SDHCPMML 250

Query: 301 DY 302
           + 
Sbjct: 251 EI 252


>gi|317407170|gb|EFV87163.1| endonuclease/exonuclease/phosphatase [Achromobacter xylosoxidans
           C54]
          Length = 251

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 77/292 (26%), Gaps = 51/292 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A  + +++ N +             +          LR+  ++   D+VFLQE+   + 
Sbjct: 2   SAMTLTVLTVNTH----------KGYTSFNRRYMLYDLREALRSAAPDLVFLQEVVGEHQ 51

Query: 80  V-------AKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                         + +     T  R   + +       H   AV  +      +++ + 
Sbjct: 52  DMAARHPGDHGAAASQYEFLADTLWRDFAYGRNAVYPAGHHGNAVLSRYPIARFENHDVS 111

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                     +R  +   +E+ G+   V  I +                     QQ   L
Sbjct: 112 VGGH-----ESRGLLHCELEVPGQAGAVHAICVHLGLL-----------ARHREQQIASL 155

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              + +   +    +IAGDFN               +        F              
Sbjct: 156 CRLVARDVPAGASLLIAGDFNDW------RLKADHLLRDCRVQEVFTSRLGRPARTFPAR 209

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              + +D   +        +  +                RLSDH PI+ +  
Sbjct: 210 WPLLRLDRIYVRNVRGWRPVPLASRV-----------WSRLSDHVPIAAEIS 250


>gi|254465319|ref|ZP_05078730.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I]
 gi|206686227|gb|EDZ46709.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I]
          Length = 297

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/310 (10%), Positives = 64/310 (20%), Gaps = 75/310 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--N 78
           A    L +WNIN                       ++++  +    D++ LQE  S    
Sbjct: 35  AMPFTLATWNIN----------------SVRLREPIVQKLLQEEGPDVLCLQECKSPVEK 78

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              K F    +                     +  +A+  +                +  
Sbjct: 79  IPVKGFAALGYRHMI-----------ARGQKGYNGVAILSRLPIEDAGEQDFAALGHARH 127

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  V   +E       V+  +       D  +   +            ++DW    
Sbjct: 128 -------VAGRLENG-----VVIHNFYVPAGGDVPDRDVNEKFGQKLDYLTAMRDW--FH 173

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDS 243
            +     V+ GD N         D                           I   +    
Sbjct: 174 ADKPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTPVEVEHLADTQEAGGWIDITRRDIP 233

Query: 244 RCNANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                     +            +D+     +                        ++ S
Sbjct: 234 GGKLYSWWSYRARDWDAADKGRRLDHIWATPDIAGAGHSS-------RILRDARGWEKPS 286

Query: 294 DHCPISIDYD 303
           DH P+   +D
Sbjct: 287 DHAPVFATFD 296


>gi|126463827|ref|YP_001044940.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029]
 gi|126105638|gb|ABN78168.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029]
          Length = 255

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 78/302 (25%), Gaps = 71/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N ++                    +L ++ +    D+V LQE          
Sbjct: 1   MRIATFNVNGVNG----------------RLPVLLRWLEEARPDVVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +     +      +            +A+  +    +Q    L G +D      +R
Sbjct: 35  LKAASARFPAAALEAAGYGAVWHGQKSWNGVAILARGAEPVQTRQDLPGVQDG----ESR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + + V  ++L +       +     +          L +   +     V
Sbjct: 91  YIEAAV-----EGVLVGCLYLPNGNPAPGPKFAAKLA------WFDHLLNHAEELLRHDV 139

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN     L                     +  +                    
Sbjct: 140 PVVLAGDFNVMPTDLDVYRPERWREDALFRPEVRAAFARLLAQGWTDSIRHLYPEDRIYT 199

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+ ++  +    L            D      ++ SDH P  I
Sbjct: 200 FWDYFRNAWERDAGLRLDHLLLSPSLLTRLKGAGV-------DRHVRGWEKASDHAPAWI 252

Query: 301 DY 302
           + 
Sbjct: 253 EI 254


>gi|327405878|ref|YP_004346716.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
 gi|327321386|gb|AEA45878.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
          Length = 323

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 80/317 (25%), Gaps = 49/317 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVK------------RTTSDYTLLRQ---YAKNLDADIVF 70
           +V +N+  L +         + +            R  +    L +   +          
Sbjct: 10  IVFYNVENLFDTIDDKSLLGNEEFTPEGNKLWDEERYQTKLNRLAEALMFINGSTPLAFG 69

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           + E+ +   V  +            +  I H   +    +  A     K ++   ++  +
Sbjct: 70  MAEIENRKVVEDLIKT---GALAQRDYKIVHYNSEDRRGMDCAFVYDSKFIQSELETRLI 126

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-LLSQQAQ 189
           +  +D       R  + +  +I    I     H  S     S       + +  L ++  
Sbjct: 127 ITVEDEPH-FRTRDIIHMKAKIGNNSIHFFVNHWPSRREGISESENRRKAAAMTLRREID 185

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK----TIDPNDSLIRFPKEKDSRC 245
            L +      E     ++ GDFN   +                   D +    +E     
Sbjct: 186 ELLN-----AEKNANILVMGDFNDTPDNYSIKTILRAKGQHEQTKGDLINLLIEEHKDGF 240

Query: 246 NANKNLRNKIPIDYFVMDQNAYK-----FLIQESFSEILYN---------------EDDI 285
               + R     D  ++ Q   +      +   +                          
Sbjct: 241 GTTVHQREWDIFDQLIVSQGLLQGQSGLEVQGNNAHIAHRKELVFTFKDGGSKPSATYGG 300

Query: 286 KSRGKRLSDHCPISIDY 302
            +     SDH P+ ++ 
Sbjct: 301 DTYHGGYSDHLPVFLNL 317


>gi|325679379|ref|ZP_08158964.1| exodeoxyribonuclease III [Ruminococcus albus 8]
 gi|324108976|gb|EGC03207.1| exodeoxyribonuclease III [Ruminococcus albus 8]
          Length = 250

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 68/304 (22%), Gaps = 79/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N                           + K+ DADI  +QE       A  
Sbjct: 1   MKLISWNVNGFRACLQKGFE---------------DFFKSADADIFCIQETKMQPDQADF 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+     F+S                ++  AV  KN              D        
Sbjct: 46  SPEGYHKYFHSAV-----------KKGYSGTAVYTKNEPKAVTYGLNGAHTDEGR----- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       + +  ++ +        +        +      L            
Sbjct: 90  -----VITCEYDDFYFVCCYVPNAQNELKRIDYRMEFEDDMRAYLCGLDKL--------K 136

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  +        F +         
Sbjct: 137 PVIYCGDLNVAHEEIDLKNPKSNVGNAGFSDQERGKFTELLAAGFADTFRRLYPETTGVY 196

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     +                      SDHCP+ 
Sbjct: 197 SWWSYRFNARKNNAGWRIDYFVVSERLMDKVGDSKILT-----------DVMGSDHCPVQ 245

Query: 300 IDYD 303
           +D  
Sbjct: 246 LDIT 249


>gi|237723215|ref|ZP_04553696.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_2_4]
 gi|293372719|ref|ZP_06619101.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|229447737|gb|EEO53528.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_2_4]
 gi|292632528|gb|EFF51124.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 367

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 84/342 (24%), Gaps = 71/342 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD----AD 67
             R+VSWNI  L +    SL  +           +  R       + +    +       
Sbjct: 32  SFRVVSWNIENLFDTHHDSLKNDHEYLPDAIRHWNYSRYKKKLADVARVITAIGEWNPPA 91

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V L E+ +   +  +  ++          + N         I  A+  ++   ++L   
Sbjct: 92  LVGLCEVENDTVLRDLTRRSPLKELSYRYVMTNSPDL---RGIDVALLYQRDLFKLLSSR 148

Query: 128 YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-LS 185
              +           R  + +  + + G  + V   H  S          Y    +  L 
Sbjct: 149 S--ISIPPFKQHRPTRDLLHVSGLLLAGDTLDVFVCHFPSRSGGAKESEPYRLYVAHILR 206

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------ 227
            +   + +       S    +I GDFN                                 
Sbjct: 207 TEVDSIMN-----IRSHPQAIIMGDFNDYPTNQSILKILKAEAPPVKTNDLASTTDSANA 261

Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-------------- 268
                       +   K K     + K       +D+ ++                    
Sbjct: 262 STVTPSSLKLYHLLARKAKSKNFGSYKFRGEWGLLDHLIVSGTLLNQSNHFFTSEEKANV 321

Query: 269 -------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     ++   +  +           +SDH PI  D++
Sbjct: 322 CLLPFLLKDDEKYGDKEPFRTYKGMKYQGGISDHLPIYTDFE 363


>gi|227494321|ref|ZP_03924637.1| exodeoxyribonuclease III; exonuclease III [Actinomyces coleocanis
           DSM 15436]
 gi|226832055|gb|EEH64438.1| exodeoxyribonuclease III; exonuclease III [Actinomyces coleocanis
           DSM 15436]
          Length = 255

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 78/299 (26%), Gaps = 66/299 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RLV+WN+N                   +    + +  K  D D++ +QE          
Sbjct: 1   MRLVTWNVN----------------SVRTRIDRVIEVLKRWDVDVLAMQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       +       +    +A+  +            G  +       R
Sbjct: 35  LKCKPEQFPFERFEEAGYQVEMVGLNQWNGVAIASRVGI-ENVQVSFPGQPEYDGVVEAR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +        + +  +++ +   LD     Y        +    L+D++ +      
Sbjct: 94  ALGAVC-----SGVEIWSLYVPNGRELDHPHYAYK------LEWLTALRDYMVETM-HDR 141

Query: 204 PFVIAGDFNRKINYLGNNDDFW-----------KTIDPNDSLIRFPKEKDSRCNANKNLR 252
              + GD+N         D              +      + I   +    R +      
Sbjct: 142 KVALVGDWNVAPFDHDVWDIKAFEGATHVSVPEREAFRAFAEIGMTEVTRERVDNYTYWD 201

Query: 253 N---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      + ID+        + +            D  + +GK  SDH P+ +D+
Sbjct: 202 YQKLRFPKNEGMRIDFVYASPALTETVTAAHI-------DRDERKGKGASDHVPVIVDF 253


>gi|225016166|ref|ZP_03705370.1| hypothetical protein CLOSTMETH_00081 [Clostridium methylpentosum
           DSM 5476]
 gi|224951039|gb|EEG32248.1| hypothetical protein CLOSTMETH_00081 [Clostridium methylpentosum
           DSM 5476]
          Length = 253

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 76/299 (25%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         + +  DAD+  +QE       A++
Sbjct: 1   MKLISWNVNGLRACLNKGF---------------LDFFQEADADVFCVQETKMQQGQAEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +     + S E              ++  AV  +   V       +   D+  R    
Sbjct: 46  ALEGYEQFWCSAE-----------KKGYSGTAVFTRIPPVSVAYGIGIPEFDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K  +++++  +     +  +               L++          
Sbjct: 91  -----VITVEFEKFTLINVYTPNAQRGLTRIDFRMQWEDAFRVYLLRLQE--------SK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N   N                          +  +     F      +    
Sbjct: 138 PVVVCGDLNVAHNEIDLKNYKTNRGNAGFSDEERGKMTELLQSGLTDSFRYLYPEKTGCY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                            IDYF+        +        +             SDHCPI
Sbjct: 198 TWWSYMFNARANNAGWRIDYFLTSDVLKDQIEDSVIYSEVL-----------GSDHCPI 245


>gi|218259778|ref|ZP_03475367.1| hypothetical protein PRABACTJOHN_01026 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224906|gb|EEC97556.1| hypothetical protein PRABACTJOHN_01026 [Parabacteroides johnsonii
           DSM 18315]
          Length = 253

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 83/303 (27%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L    G  L                ++      D++ LQE          
Sbjct: 1   MKIITYNVNGLRAAVGKGLP---------------EWLAQEQPDVLCLQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +                +    ++ +A+  +        +   G          R
Sbjct: 38  LQPDQYPAEAFEALGYKAWLFSAQKKGYSGVAILSRREP----DHVEYGMGIEKYDNEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D  +       +   +  +  ++++ + ++S  
Sbjct: 94  F-----IRADFGDLSVISVYHPSGTSGDERQ-------AFKMEWLEDFQNYVVELQKSRP 141

Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD+N                         +   + +D            D +   
Sbjct: 142 KLILCGDYNICHEPIDIHDPVRNATNSGFLPEEREWMTRFLDAGYIDTFRLLNPDKQEYT 201

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R           IDY ++ +     + +        +           SDHCP  I
Sbjct: 202 WWSYRFSARAKNKGWRIDYCMVSEPMKAQVEKAYILNEAVH-----------SDHCPAVI 250

Query: 301 DYD 303
           +  
Sbjct: 251 EVS 253


>gi|237743089|ref|ZP_04573570.1| exodeoxyribonuclease III [Fusobacterium sp. 7_1]
 gi|229433385|gb|EEO43597.1| exodeoxyribonuclease III [Fusobacterium sp. 7_1]
          Length = 253

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 80/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                 +       Y    +ADI  LQE    +A    
Sbjct: 1   MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                         + ++   ++   
Sbjct: 91  -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMIWEDEFRKYLKNLEKKK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +  +  +  F     +     
Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +   K L+       +             SDHCP+ 
Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKELEKNLVDAEIHTQI-----------EGSDHCPVV 246

Query: 300 --IDYD 303
             +D D
Sbjct: 247 LFLDLD 252


>gi|297154471|gb|ADI04183.1| hypothetical protein SBI_01062 [Streptomyces bingchenggensis BCW-1]
          Length = 297

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 78/282 (27%), Gaps = 35/282 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++++N+   S+ E                  +R+  +     ++  QE          
Sbjct: 41  LRVMTFNLRFASDTE--------PNSWAQRRPAMRELLRREAPQLLGTQEGLYGQLRDIA 92

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   +  T R              T      +         P +   +++  A  R
Sbjct: 93  HDLGPRYDWLGTGRAGGSRDEFMAVFYDTNRLEPLEYDHFWLSDTPYVIGSNTWGGAVVR 152

Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +       G + + L+ HL               S     + A  + + +    ++
Sbjct: 153 MVTWVRFHDLRTGGQFYALNTHLDH------------RSQPARERAAALITERL-GGLDA 199

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PID 258
            +P ++ GDFN   +     D      T+  +         + +  +  + L      ID
Sbjct: 200 ALPRIVTGDFNVAAHGNPVYDAMLGGGTLVDSWDAAERRSAQYATFHGYRPLVPDGDRID 259

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           + +            +        +     G+  SDH P+  
Sbjct: 260 WILTSP---------TVHTHYAAINPYSRDGQFPSDHLPVQA 292


>gi|153839526|ref|ZP_01992193.1| nuclease [Vibrio parahaemolyticus AQ3810]
 gi|149746952|gb|EDM57940.1| nuclease [Vibrio parahaemolyticus AQ3810]
          Length = 632

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 42/382 (10%), Positives = 94/382 (24%), Gaps = 96/382 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65
              A     +R+ S+N+         S   N   +                +      +D
Sbjct: 114 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 173

Query: 66  ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111
           ADI+ L E+ +      +AV  +            + +      ++     +   ++ I 
Sbjct: 174 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 233

Query: 112 TAIAVRKKNVR----------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--N 153
            AI  R K V                     +       +       R ++     +  +
Sbjct: 234 VAILYRAKVVTPKEAAKVIFTPEQHIAENTITRKDGAESNPAYDKYQRHSLLQTFTVQES 293

Query: 154 GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           G+ + ++  H KS                   +      +     A  + + +   K   
Sbjct: 294 GEDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKDVKGD- 352

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL------------- 234
              ++ GD N                           + TI+  +               
Sbjct: 353 --VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAGYTTINGGELQVEQTQIKQGYGLN 410

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
                   +   +         +D+ +   +  + ++      I   E ++   G +   
Sbjct: 411 NLNTLLHGTDTFSYTYSGELGNLDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTG 470

Query: 292 ----------LSDHCPISIDYD 303
                      SDH P+ I  D
Sbjct: 471 DMPKYKDAFSASDHDPVIIAID 492


>gi|148235150|ref|NP_001082408.1| similar to deoxyribonuclease I-like 3 [Xenopus laevis]
 gi|49118064|gb|AAH73008.1| LOC398451 protein [Xenopus laevis]
          Length = 295

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 84/304 (27%), Gaps = 37/304 (12%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DA 66
           L+F    C    A  +R+ S+N+ +  E             T  D   +    + +    
Sbjct: 4   LLFLCAICV-PDALGLRICSFNVQSFGE-------------TKRDKPAVMNVVRMIISRC 49

Query: 67  DIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           DI  L E+   +      +                 +     R S  + +     RK  V
Sbjct: 50  DITLLMEIKDSSDTVIRSLMTQLNSQPETRNQFDLTISQRLGRKSYKEQY-GFIYRKNLV 108

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            V +++Y  +  +     A +R    +  +     +    I  +      + E       
Sbjct: 109 SV-KETYQYMDLQPGDEDAFSREPYVVWFQAPSTDVKEFVIIPQH----TTPEAAVREID 163

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L        + W          F+  GD N   +Y+         +  +   +    + 
Sbjct: 164 ELYDVYLDVKEKW------DSENFIFMGDLNAGCSYVPKKSWKNIRLRNHTEFVWLIGDN 217

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPIS 299
                 +        I   V+       ++  S S   +      +  + L  SDH P+ 
Sbjct: 218 KDTTVKSSTNCAYDRI--VVVGDKLISSIVPASASVFDFMAAYGLTEEQALEVSDHFPVE 275

Query: 300 IDYD 303
           +   
Sbjct: 276 VQLT 279


>gi|148229324|ref|NP_001079750.1| deoxyribonuclease I-like 3 [Xenopus laevis]
 gi|3757883|gb|AAC64266.1| deoxyribonuclease gamma [Xenopus laevis]
          Length = 295

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 85/301 (28%), Gaps = 34/301 (11%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DAD 67
           +  L       +  +R+ S+N+ +  E             +  D   +    + +    D
Sbjct: 4   LLLLCALFVPHSLGLRICSFNVQSFGE-------------SKRDKPAVMNVVRKIISRCD 50

Query: 68  IVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKKNVRV 123
           I  L E+       +  +  +         +  +  S+R              RK  V V
Sbjct: 51  ITLLMEIKDSSNTVIRLLMAQLNSQSETRNQFDLTISQRLGRKSYKEQYGFIYRKNLVSV 110

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            + +Y     +     A +R    +  +    ++    I  +      + E        L
Sbjct: 111 -KGTYQYKDLQPGDEDAFSREPYVVWFQAPSTEVKEFVIVPQH----TTPEAAVREIDEL 165

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                   + W      +   F+  GD N   +Y+         +  +   +    + + 
Sbjct: 166 YDVYLDVKQKW------NSENFIFMGDLNAGCSYVPKKSWKNIRLRNHTEFVWLIGDNND 219

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISID 301
               +        I   V+ +     ++  S +   +      +  + L  SDH PI + 
Sbjct: 220 TTVKSSTNCAYDRI--VVVGEKLVSSIVPGSANVFDFMVAYGLTEEQALEVSDHFPIEVR 277

Query: 302 Y 302
            
Sbjct: 278 L 278


>gi|319791365|ref|YP_004153005.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS]
 gi|315593828|gb|ADU34894.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS]
          Length = 263

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 83/303 (27%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                     L ++      D+  LQE+ S +A    
Sbjct: 4   MKIATFNVNGINS----------------RLARLLEWLDESKPDVACLQELKSPDAA--- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +     R   +            +A+  +    +     L G +   +   +R
Sbjct: 45  -------LPVDAIRGAGYGIVAHGQRAWNGVAILARGREPIDTGRGLPGME---ADTQSR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++       + V  ++L +       +  Y        Q  +       +   S +
Sbjct: 95  YIEAVV-----GGVLVGCLYLPNGNPQPGPKFDYK------LQWFEAFNRHAKKLFSSGM 143

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPND-SLIRFPKEKDSRCN 246
           P V+AGD+N         +                 F + +       IR          
Sbjct: 144 PVVLAGDYNVVPTDADIYNPASWRDDALLQPESRAAFAQLLKQGWTDAIRATHPDRVPFT 203

Query: 247 ANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                RN+        ID+ +++      L            D         SDH P  I
Sbjct: 204 FWTYWRNRYPRDAGLRIDHLLLNAELAPMLRSAGV-------DRDVRGRTGASDHAPAWI 256

Query: 301 DYD 303
           + D
Sbjct: 257 ELD 259


>gi|299538266|ref|ZP_07051551.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZC1]
 gi|298726468|gb|EFI67058.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZC1]
          Length = 251

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +    G                   ++   +DAD   +QE     A   V
Sbjct: 1   MKFISWNVNGIRACLGKGF---------------LEFFHQIDADFFCIQETKC-QAGQVV 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++  +   +          +  A+  K+  +  +     G     S+   R
Sbjct: 45  LSIEGYEQYWNYAQKKGY----------SGTAIFTKHTPLSVK----YGVGAEDSQDEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  K  ++++++  +     +           L+   Q L            
Sbjct: 91  I-----ITLEYKNFYLVNVYTPNAQRDLARLPLRLQWEDRLANYLQELN--------CQK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N     +                     +  +  +  +  F  +     +  
Sbjct: 138 PVVYCGDLNVAHTEIDLKNAKSNIGNSGFTYEERAKFSALLESGFVDSFRYKHPEETDHY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYFV+     + +   +    +             SDHCPI 
Sbjct: 198 TWWSYMNKVRERNIGWRIDYFVVSNQLKEQIESATIHPHI-----------MGSDHCPIE 246

Query: 300 IDY 302
           +  
Sbjct: 247 LQL 249


>gi|225376286|ref|ZP_03753507.1| hypothetical protein ROSEINA2194_01924 [Roseburia inulinivorans DSM
           16841]
 gi|225211932|gb|EEG94286.1| hypothetical protein ROSEINA2194_01924 [Roseburia inulinivorans DSM
           16841]
          Length = 255

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 74/303 (24%), Gaps = 78/303 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++ +SWN+N L                         +   +DAD   +QE        
Sbjct: 3   KTMKFISWNVNGLRACMQKGF---------------LDFFNEVDADFFCVQETKLQEG-Q 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +  F++      +          +  A+  K+  +       +   D   R  
Sbjct: 47  IALDLPGYHQFWNYAEKKGY----------SGTAIFTKHEPLSVSYGIGIPEHDHEGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++ +     +++  +  +     +                + L        + 
Sbjct: 95  -------VITLEYDAFYLVTCYTPNSQNELARLPYRMQWEEDFLAFLKRL--------DE 139

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           + P ++ GD N                             T+  +     F      +  
Sbjct: 140 VKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKMTTLLNSGFTDTFRYFYPDKEG 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF+  +   + L        +Y            SDHCP
Sbjct: 200 IYSWWSYRFKAREKNAGWRIDYFITSRCLDEKLQSAGIHTEVY-----------GSDHCP 248

Query: 298 ISI 300
           + +
Sbjct: 249 VEL 251


>gi|148284900|ref|YP_001248990.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
 gi|148285144|ref|YP_001249234.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
 gi|146740339|emb|CAM80757.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
 gi|146740583|emb|CAM81209.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
          Length = 261

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 72/306 (23%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++WNIN                       LL++     + DI+ LQE        ++
Sbjct: 1   MKIITWNIN----------------SIRIRIHLLQKLVHLYNPDIIALQE---TKVEDRL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP            L       S    +  +A+  +          L   +         
Sbjct: 42  FP------VTECINLGYKYITYSGQKSYNGVAILSRISFESTFVINLYNDEKR------- 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + IN  ++ + + ++ +    D  +   +           ++  W    K    
Sbjct: 89  -----HIAINIGELSIHNFYVPAG--GDIPDANVNIKFKHKLCYVDFMNAWFLNNKSKKD 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N                               I   D +             
Sbjct: 142 KIILLGDLNIAPLESDVWSSYQLRNVVSHTDIERKKLMHNITSFDWIDAVRFFSGKHEKL 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +       +                      SDH P
Sbjct: 202 YSWWSYRNIDWSKSDRGRRLDHIWISHPLESKIKSCIII-------KDARGWDMPSDHVP 254

Query: 298 ISIDYD 303
           + ++ +
Sbjct: 255 VMLEIE 260


>gi|15639533|ref|NP_218983.1| hypothetical protein TP0544 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|3322837|gb|AAC65531.1| predicted coding region TP0544 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|291059921|gb|ADD72656.1| endonuclease/exonuclease/phosphatase family [Treponema pallidum
           subsp. pallidum str. Chicago]
          Length = 622

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/351 (10%), Positives = 88/351 (25%), Gaps = 79/351 (22%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V      A+ + + S+N+   S             R            K    D++ L E
Sbjct: 291 VSTIQFNARFLNIASYNVENFSAGNKAD-----SARARVFAKHFVNDLKA--PDVICLVE 343

Query: 74  MGSYNAVAK---------------------------VFPKNTWCIFYSTERLINHSKRDS 106
           +   +   K                               +      +  + ++      
Sbjct: 344 IQDDDGAKKHHHCTSAQHTLDLLVRAMAEFSAVRYKAVNIDPQDNAPAGVQSLDADGGQP 403

Query: 107 NNDIHTAIAVRKKNVRVLQ----------------------QSYPLLGAKDSFSRAGNRR 144
             +I      R   V+++Q                         P        S    R+
Sbjct: 404 GGNIRCCYLYRTDRVQLVQDQTGSAGTFHSVAQMVRGGRQMVKNPARIGVGQESFQNTRK 463

Query: 145 AVELLVEI-----NGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLSQQAQWLKD 193
           ++    +       GK   V+  H  S    D +  +  P+        +          
Sbjct: 464 SLVAHFQFVSGVNKGKDFVVVTNHFSSKRGDDPVWGSTQPAQEHSKRKRIQQAAQVAAFV 523

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              +++ + +P V+AGDFN             +               ++          
Sbjct: 524 AALRRERADLPVVVAGDFNDFWFSDVI-----QKFTAVGMHSALDLLPETERYTYVYRGY 578

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +D  +        +   + +  + + +  +   +R+SDH P+ +   +
Sbjct: 579 SQTLDNIL-------SVGARTETADILHINAEQPARERVSDHDPVFVQLSW 622


>gi|319441976|ref|ZP_07991132.1| exodeoxyribonuclease III [Corynebacterium variabile DSM 44702]
          Length = 293

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 82/320 (25%), Gaps = 73/320 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ + N+N +                 +       +    D D++ +QE+    A    
Sbjct: 2   LRIATANVNGIRA---------------AQRRGFGDWLDARDCDVIAVQEV---RAQPDK 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P++ +  ++      N             +AV  K   V  +++     +    R    
Sbjct: 44  IPEDAFGNYHVALETGNIPG-------RNGVAVLTKTPPVAVRTWSDGSDRVPLPRKLRP 96

Query: 144 RA---VELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQA 188
                  + V++    + V  ++L                        Y      L+   
Sbjct: 97  FIPQGRYIEVDLADAPVTVACLYLPKGGLPAEMQRPERMREAPDGGARYERKMGFLAGFG 156

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232
           ++L             F++ GD N                         + F + + P  
Sbjct: 157 RYLTATRRAALAEGREFLLMGDMNIAHTRHDLTHWRRNQSHDGFLPEEREWFDRQLSPRT 216

Query: 233 SLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +                               IDY +      +               
Sbjct: 217 LVDVVRSLHPDEDGPYSWWSWAGQSFAKDAGWRIDYHLATPRLARTATSAGV-------- 268

Query: 284 DIKSRGKRLSDHCPISIDYD 303
           D   RG RLSDH P+ +DYD
Sbjct: 269 DRDFRGMRLSDHSPVVVDYD 288


>gi|307823885|ref|ZP_07654113.1| exodeoxyribonuclease III Xth [Methylobacter tundripaludum SV96]
 gi|307735179|gb|EFO06028.1| exodeoxyribonuclease III Xth [Methylobacter tundripaludum SV96]
          Length = 254

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 84/308 (27%), Gaps = 81/308 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++SWN+N +   +                    +    LDAD + LQE    +     
Sbjct: 1   MKIISWNVNGVRAVQSKGF---------------AETLALLDADCILLQETKAQADQIDK 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   + + ++ +           +    ++ + +  +   +   S   +   D   R  
Sbjct: 46  ALEGIDGYRVYSN----------CAERKGYSGVTILSRKEPLQVISDIGIVEHDREGR-- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++    +  ++L++++ +     +  +             + L+         
Sbjct: 94  -------VIVAEFENFFLLNVYVPNSGEALARLDYRQTWDIEFLAYCRQLQK-------- 138

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----------------WKTIDPNDSLIRFPKEKDSRC 245
             P +  GDFN     +                      +        +  F        
Sbjct: 139 KKPLIACGDFNVAHQEIDIARPKPNYNKSAGYTQVEIDGFSRFLDAGLVDTFRHFH-PDT 197

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            A      +           IDY +  +     + Q      +             SDHC
Sbjct: 198 VAYSWWSFRGGARARNVGWRIDYVLTSKTLAGNVKQAFILPEIS-----------GSDHC 246

Query: 297 PISIDYDF 304
           P+ I+ DF
Sbjct: 247 PVGIEIDF 254


>gi|299067259|emb|CBJ38456.1| conserved protein of unknown function,
           endonuclease/exonuclease/phosphatase family [Ralstonia
           solanacearum CMR15]
          Length = 289

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 86/306 (28%), Gaps = 54/306 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGS-------- 76
           +++WNI      +G             D + +   A  +   D++ LQE+ S        
Sbjct: 5   ILTWNIQWGRGADG-----------RVDLSRMLAEAHAMGPFDVLCLQEVTSGFDHLPGQ 53

Query: 77  --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +   ++         ++    I   + +  +      A+  +   +    + L    
Sbjct: 54  PGEDQWQELAGALGQA--FTLIGGIALERHEGAHIQRFGNAIATRLPVLHVARHALPCPA 111

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D+      R A+E +V+     + V+  HL+ +     +    +     +    +     
Sbjct: 112 DA-GPTMPRMAIEAIVQAPFGPLRVVSTHLEYYSETQRIAQIDALRALHVEGCMRAAHPP 170

Query: 195 ITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               + +  PF         VI GDFN K +                +L    +      
Sbjct: 171 TLGPEPTDGPFRPLAQTRATVICGDFNCKPDSTPKRLVTVPFSHEVATLYDAWETAHGPT 230

Query: 246 NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                                D+ ++       + +   +              + SDH 
Sbjct: 231 PQPPTFGVHDRTGWTEPAYACDFMLVSAPLKTRVARVEVN-----------SATQASDHQ 279

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 280 PMLLEL 285


>gi|294790372|ref|ZP_06755530.1| exodeoxyribonuclease III [Scardovia inopinata F0304]
 gi|294458269|gb|EFG26622.1| exodeoxyribonuclease III [Scardovia inopinata F0304]
          Length = 276

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 73/305 (23%), Gaps = 55/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWNI++L+        ++   R       +    +  + +++ +QE          
Sbjct: 1   MKFVSWNIDSLNAALLGKSDRSVQSR------QVLASIRGENPEVIAIQETKLPATGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   F+    +   S  +     +       K    L                  R
Sbjct: 55  KHLTALSQFFDDYDVHWRSSVEPARKGYAGTMCLSKKGLPLVAVTEPRIHSPEPMDCEGR 114

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E      ++++++  +        +               L        +   
Sbjct: 115 ---LQTLEFPD--FYLVNVYTPNSGDGLRRLSDRQLWDDAYRAYLTEL--------DEAK 161

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                           +  +        +     ++  A 
Sbjct: 162 PILACGDFNVAHQEIDLAHPASNHHSAGFTDEERQKFTALLGAGFTDTYRYLHPNQAGAY 221

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + Q +  +                DH PI
Sbjct: 222 TWWAQRAVTSKANNSGWRIDYWLVSNRLNSRVKQSTMIDTGDRR-----------DHAPI 270

Query: 299 SIDYD 303
            +D  
Sbjct: 271 LLDIT 275


>gi|288803465|ref|ZP_06408897.1| AP endonuclease domain protein [Prevotella melaninogenica D18]
 gi|288334075|gb|EFC72518.1| AP endonuclease domain protein [Prevotella melaninogenica D18]
          Length = 366

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 92/335 (27%), Gaps = 79/335 (23%)

Query: 2   IRKYVLALVFFLV---------PCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKR 49
           +R   L L+ FL+         P      +    ++++S+N+   S        KN    
Sbjct: 67  LRTIWLPLLGFLLCYGPIRTYSPFNIPEDKPHGAIKVLSYNVFMFSSWSEPDAKKNP--- 123

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  +  Y     ADIV LQE  +               +   + +I  +       
Sbjct: 124 -------IVDYIVKSKADIVCLQEAQATLEDKDHIYSTLKKHYPYFKLMIKKAPGADY-- 174

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               + +  K   + Q + P   + +              ++I G    V++ H +S   
Sbjct: 175 ----MVLLSKYPILWQDTIPYGSSSNQSVAYM--------LDIKGTNTLVVNNHFESNGL 222

Query: 170 LDSLEN------------------------TYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               +                               +  + QA+ +  ++ +  +  VP 
Sbjct: 223 SSGDKEGFKTLVKGELKTGEAKRQSVHLITKLGDVSARRAPQAETVARYVKKYLDKKVPV 282

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           ++ GDFN        +    K ++       F +  +    +         ID+     +
Sbjct: 283 ILCGDFNDSP-LSYTHRTIAKELND-----CFVESGNGPGISYHKSGMYFRIDHIFRSDD 336

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +                       SDH PI  
Sbjct: 337 FESY----GAKVDNSVTT---------SDHYPIYC 358


>gi|156551960|ref|XP_001602349.1| PREDICTED: similar to neutral Sphingomyelinase, putative [Nasonia
           vitripennis]
          Length = 404

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 78/286 (27%), Gaps = 22/286 (7%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           ++ N+ TL+      + KN V R       +     + D DIV LQE+ S +    +  K
Sbjct: 5   LTLNVLTLNCWGIPYVSKNRVNR----MNAIADKLMSEDYDIVCLQEVWSIDDFRLIRAK 60

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
               + YS                   I     +   L      +   D     G +   
Sbjct: 61  TQDKLPYSHYFFSGVVGSGICIFSRYCIGDVMFHKWTLNGYVHKIHHGD---WFGGKGVG 117

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
              ++     I V   HL +               +    QA     +I   +      +
Sbjct: 118 LCRIQAQNVHINVYVAHLHA-----EYCRENDEYNAHRVMQAFDTAQFIRMTRGGADAVI 172

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--------PID 258
           + GD N +   L            +           S C  N     ++         ID
Sbjct: 173 LGGDLNTEPQDLAFRIICGIAELSDACSKDANSLGTSECAKNSYTDLRVARKIPQGKRID 232

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           + +   +    +    FS        +  +    SDH  +   + F
Sbjct: 233 HILYLGSKRYKVDVSEFSHPFPT--RVPDKTFSYSDHEAVMASFKF 276


>gi|257457683|ref|ZP_05622850.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           vincentii ATCC 35580]
 gi|257445069|gb|EEV20145.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           vincentii ATCC 35580]
          Length = 350

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 103/361 (28%), Gaps = 72/361 (19%)

Query: 1   MIRKYVLALVF-------FLVPCT-------ASVAQKVRLVSWNINTLSE---------Q 37
           M  K +L  +F         + CT           + V LV++N  T  +         +
Sbjct: 1   MKLKRLLVPLFACIAAGVIFLQCTRCTPLTDTQFKEPVTLVTYNTQTFFDAVEDGTEFKE 60

Query: 38  EGVSLWKNSVKRTTSDYTLLRQYAKNLD----------ADIVFLQEMGSYNAVAKVFPKN 87
              S  + + ++  +    L+                  DIV LQE+ +   V     + 
Sbjct: 61  YKGSKSQWTEQKYRTRLERLKHTVFAAGEKLTGKKDRLPDIVVLQEIENDRVVEDFCKQL 120

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
                  ++    ++     +       +  K        + L   +    R      + 
Sbjct: 121 P------SKENYPYAVCPPASKSAFTTVILSKYPVEQFFVHRLYTDQKISLRPLTEAVLN 174

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV--PF 205
              +   + + V  +H KS             S ++ + Q   L   I + +E     PF
Sbjct: 175 TGSKDKPQLLTVFAVHWKSKTGSSD-------SAAVRALQEAQLMQKIREHREKNPQIPF 227

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM--- 262
           V+ GDFN+ +      DD     D  D      +       +     +   ID+      
Sbjct: 228 VVCGDFNQTLEEFNQLDDLAVCWDGADYRTESEEGIQPD-GSYYFKGSWEKIDHIFYESG 286

Query: 263 ---DQNAYKFLIQES----FSEILYNEDDIKS-------------RGKRLSDHCPISIDY 302
                ++  F   ++       + +                     GK  SDH P+   +
Sbjct: 287 ADGSGDSDAFYTGDAGAAYIEPLSFFVLYEPPLIEDGKPVRYNVVSGKGYSDHLPLGFRF 346

Query: 303 D 303
           +
Sbjct: 347 E 347


>gi|284033955|ref|YP_003383886.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813248|gb|ADB35087.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 269

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 76/286 (26%), Gaps = 59/286 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--------Y 77
           ++++NI+     +GV            +   +        A +V LQE+           
Sbjct: 34  VMTYNIHHAQGVDGVL-----------NLERIATVIAQSGAAVVGLQEVDVHWSERSNWQ 82

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           N  A +  +      ++    ++          +   A+  +       +  L       
Sbjct: 83  NQAAWLATRLGMEYRFAANLDLDPLVPGEPRRQY-GTAILSRYPITSFSNTLLP----LH 137

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           + +  R      +++ G+ +     HL               + +   +Q+Q +   +  
Sbjct: 138 AGSEQRGLAVATIDVAGRDVRFATTHL------------SKLTSAERVEQSQRIVQLL-- 183

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
              S  P ++ GD N               +      + F     +             I
Sbjct: 184 -AGSTTPTLLTGDLNAVPTAPEIKHLT-TVLKDTWPEVGFGLGLTNPAVL-----PLRRI 236

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           DY +   +      +   +                 DH P+   ++
Sbjct: 237 DYVLHSTDFRAKSARTPITHAA--------------DHLPVVATFE 268


>gi|47522808|ref|NP_999156.1| deoxyribonuclease-1 precursor [Sus scrofa]
 gi|62512132|sp|P11936|DNAS1_PIG RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I; Flags: Precursor
 gi|15027532|dbj|BAB62268.1| deoxyribonuclease I [Sus scrofa]
          Length = 284

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 85/284 (29%), Gaps = 32/284 (11%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAK 82
           R+ ++NI T  E               +    + +       DI  +QE+   +  AV K
Sbjct: 24  RIAAFNIRTFGET---------KMSNATLSNYIVRILSRY--DIALIQEVRDSHLTAVGK 72

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  +       +   +++     S          R   V VL       G +   +   N
Sbjct: 73  LLNELNQDDPNNYHHVVSEPLGRSTYKERYLFVFRPDQVSVLDSYLYDDGCEPCGNDTFN 132

Query: 143 RRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R    +       ++     + L +     + E        L  +Q   L+D        
Sbjct: 133 REPSVVKFSSPSTQVKEFAIVPLHAAPSDAAAEIDSLYDVYLNVRQKWDLED-------- 184

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               ++ GDFN   +Y+  +      +  +        +      ++ +       D  V
Sbjct: 185 ---IMLMGDFNAGCSYVTTSHWSSIRLRESPPFQWLIPDTADTTVSSTHCAY----DRIV 237

Query: 262 MDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
           +     +  ++ +S +   +      S      +SDH P+ +  
Sbjct: 238 VAGPLLQRAVVPDSAAPFDFQAAFGLSEQTALAISDHYPVEVTL 281


>gi|224139930|ref|XP_002323345.1| predicted protein [Populus trichocarpa]
 gi|118486421|gb|ABK95050.1| unknown [Populus trichocarpa]
 gi|222867975|gb|EEF05106.1| predicted protein [Populus trichocarpa]
          Length = 603

 Score = 82.3 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/348 (11%), Positives = 88/348 (25%), Gaps = 64/348 (18%)

Query: 19  SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           S +    ++S+NI +   +  +  S   +           L +      ADIV LQE+ S
Sbjct: 248 SSSGTFTVLSYNILSDVYATNDTYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQS 307

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL----- 131
            +      P+     + +  +   +   + N       A   +  R        +     
Sbjct: 308 DHYEEFFAPELDKHGYQALYKRKTNEVYNINTHTIDGCATFFRRDRFSHVKKYEVEFNKA 367

Query: 132 --GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------------Y 177
                D+   +  R+     +  +   + V+     S    D+                +
Sbjct: 368 AQSLTDALVPSAQRKTALNRLVKDNVALIVVLEAKFSNQGADNPGKRQLLCVANTHINVH 427

Query: 178 SPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                +   Q   L   + +    + +P ++ GDFN       ++      +D     + 
Sbjct: 428 QDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLAMGKVDQLHPDLV 487

Query: 237 FPKE-----------------------------------------KDSRCNANKNLRNKI 255
                                                         +     N       
Sbjct: 488 VDPLGILRPHSKLTHQLPLVSAYSSFARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIG 547

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +DY      +     + E   E    +D      +  SDH  +  ++
Sbjct: 548 TLDYIFYTADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 595


>gi|325269387|ref|ZP_08136004.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608]
 gi|324988308|gb|EGC20274.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608]
          Length = 249

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 85/302 (28%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L    G                   Q  K LDAD   LQE     A    
Sbjct: 1   MKLISWNVNGLRACVGKDFE---------------QQFKALDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  K+  +       +   D   R    
Sbjct: 45  ISFPGYTSYWN----------YADKKGYSGTAIFTKHKPLDVTYGIGMDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                   +  +  ++++    +   
Sbjct: 91  -----VITLEMDDFYLVTVYTPN-------SQDGLRRLDYRMKWEKDFQNYL-HWLDEKK 137

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+ GD N                         +   + +D            +    +
Sbjct: 138 PVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKMTQLLDSGFIDTFRSLYPEQVTYS 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R +         IDYF++ +     L        +             SDHCPI +
Sbjct: 198 WWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIHTEI-----------MGSDHCPIEV 246

Query: 301 DY 302
           D 
Sbjct: 247 DL 248


>gi|229062743|ref|ZP_04200048.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
 gi|228716503|gb|EEL68206.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
          Length = 352

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 107/327 (32%), Gaps = 70/327 (21%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +   + ++ ++NI               G     +S ++T ++   +  + +N ++D   
Sbjct: 50  APGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109

Query: 71  LQE----------MGSYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           LQE          +  +  + K  P         +   +    + N             +
Sbjct: 110 LQETDIKSMRSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITNPMGYA-----EAGL 164

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKI-WVLDIHLKSFCFLD 171
           +   K      + + L G +    R  +  R  VE  + +N  K   ++++HL +     
Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA----- 219

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                Y     +  QQ ++LK ++ +  E+    ++ GD+N+ ++ +  +D  +    P 
Sbjct: 220 -----YDEGGKIRKQQVEYLKKYMNKHYENGDYVIMGGDWNQLLSNVQLSDPKFVKERPE 274

Query: 232 DSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQESF 275
             +       D       +                      ID F++  N    ++    
Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN--VEIVNVQG 332

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +            SDH P+S  +
Sbjct: 333 KDLKFEN----------SDHNPVSAVF 349


>gi|114660657|ref|XP_001168176.1| PREDICTED: deoxyribonuclease I isoform 3 [Pan troglodytes]
 gi|332845211|ref|XP_001168207.2| PREDICTED: deoxyribonuclease-1 isoform 4 [Pan troglodytes]
 gi|332845213|ref|XP_510773.3| PREDICTED: deoxyribonuclease-1 isoform 5 [Pan troglodytes]
          Length = 282

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 30/283 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E               +  + + Q       DI  +QE+   +  AV
Sbjct: 22  SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+          +   +++     ++         R   V  +   Y   G +   +  
Sbjct: 71  GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            NR    +       ++    I        D++    +     L  Q +W          
Sbjct: 131 FNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW---------- 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            L   ++ GDFN   +Y+  +      +  + +      +         +       D  
Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLRTSPAFQWLIPDSADTTATPTHCAY----DRI 236

Query: 261 VMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300
           V+     +  ++ +S     +      S    + +SDH P+ +
Sbjct: 237 VVAGMLLQGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 279


>gi|84385765|ref|ZP_00988795.1| hypothetical protein V12B01_12100 [Vibrio splendidus 12B01]
 gi|84379081|gb|EAP95934.1| hypothetical protein V12B01_12100 [Vibrio splendidus 12B01]
          Length = 347

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/336 (11%), Positives = 93/336 (27%), Gaps = 59/336 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +   ++N+    E            S          + +  ++LD D++  QE+ S  ++
Sbjct: 7   ITFATFNLLNYLEPPNAYYDFENIYSFDEWQKKQHWMAETIRSLDCDVIGFQEIFSPQSL 66

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
            ++  +  +  F   +                 IA R     V   +     L     S 
Sbjct: 67  EQLMNELGYPYFAVVDSAHVEDDYL-YTSPVVGIASRYPIENVQPVTPDSKLLKAFNLSD 125

Query: 138 SRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ------- 187
           + + NR  V   + +        +V+    +      +       +      Q       
Sbjct: 126 NFSFNRTPVHATITLPHLGSTDCYVVHFKSQRPTEPRTESVDSDNAQQGAKPQSDTLTRF 185

Query: 188 -----------------AQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTI 228
                            AQ L  +I   + ++  P V+ GDFN+ + +        +   
Sbjct: 186 HQEQLGSWLSSVQRGLEAQMLHQYITNHRYQTDQPVVLMGDFNKPLFHDEFKGLLSYAIN 245

Query: 229 DPNDSLIRFPKEKDSRCN-----------------ANKNLRNKIPIDYFVMDQNA----- 266
              +S       +                       +    +   +DY +M         
Sbjct: 246 RDENSKHWLSHFRLKDSWDLYHQLHEEDLLEQRKPTHYYGASGSVLDYILMSNEFDCQNS 305

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLS-DHCPISID 301
              +   S++ + ++  +      + S DH  +S+ 
Sbjct: 306 SSLMEMSSYTVLDHHLINPSFEHDQFSTDHAIVSVT 341


>gi|126662905|ref|ZP_01733904.1| exodeoxyribonuclease III [Flavobacteria bacterium BAL38]
 gi|126626284|gb|EAZ96973.1| exodeoxyribonuclease III [Flavobacteria bacterium BAL38]
          Length = 253

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 92/307 (29%), Gaps = 83/307 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79
           ++++S+N+N +                        ++ +  + D++ LQE+ +       
Sbjct: 1   MKIISYNVNGIRAAISKGF---------------LEWLQQANPDVICLQEIKATEEQIPK 45

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +        +  ++S E              ++ +AV  K          + G       
Sbjct: 46  LEIEAAGYPYQYYFSAE-----------KKGYSGVAVLSKIEP----KTIVFGTGIKHMD 90

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      + ++  K+ V+ ++L S   +D L+  +              + ++ + K
Sbjct: 91  FEGRN-----LRVDFDKLSVMSLYLPSGTNIDRLDYKFQ--------YMAEFQLYVDELK 137

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSR 244
           + +   VI GD+N     +  +D                       N  +  F       
Sbjct: 138 KEIPNLVICGDYNICHEAIDIHDPIRNAKVSGFLPEERAWLDGFLKNGFVDTFRHLNKEP 197

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            N       +           IDY +  ++  + + +                  + SDH
Sbjct: 198 -NNYSWWSYRANARNNNKGWRIDYCLATESLKEKIQRALIL-----------PEAKHSDH 245

Query: 296 CPISIDY 302
           CP+ ++ 
Sbjct: 246 CPVLVEI 252


>gi|108762443|ref|YP_632150.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622]
 gi|108466323|gb|ABF91508.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622]
          Length = 260

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 80/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           +R+VSWN+N L                         +     A +V LQE+ +       
Sbjct: 1   MRVVSWNVNGLRSVHRKGFLP---------------WLAGCRAQVVGLQEVRARADQLPD 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V   + W   +       +          + + +  +       +   +G  D   R  
Sbjct: 46  DVRSPSRWKTHFVAAERPGY----------SGVGLYSRLEPDEVVTVLGVGELDVEGRLQ 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                         K+ V++ +  +    D                 + L + + +    
Sbjct: 96  I---------ARFGKLTVVNGYFPNGNGKD----RDLSRIPYKLTFYRRLFERLEKPLRD 142

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GDFN                         ++F + I            K    
Sbjct: 143 GGRVLVMGDFNTAHQEIDLARPKENRETSGFRPEEREEFDRWIRAGWVDTFRHFNKGGGN 202

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +  + R           IDY +    A  ++ +      +             SDHCP+
Sbjct: 203 YSWWSQRAGVREKNIGWRIDYVLASPAAMAYVRKAGIHPDVL-----------GSDHCPV 251

Query: 299 SIDYD 303
           S+D D
Sbjct: 252 SVDLD 256


>gi|301063079|ref|ZP_07203640.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
 gi|300442799|gb|EFK07003.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
          Length = 333

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 89/328 (27%), Gaps = 57/328 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80
           + +VSWN+N +S  +     +  +K        L  +      D++ +QE+       A+
Sbjct: 5   ITIVSWNMNGISFLKSEPQKRGLLK--ARITRQLNDFIHVHRPDLIAIQEIVRYKENGAI 62

Query: 81  AKVFPKNTWCIF----------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            ++        +                +   R       D+       +  R       
Sbjct: 63  QELVEPPDGYFYQSSISIDTARQNNPVKWEPIRQSGKWTSDAYLGQGNGLMWRGDIPHCS 122

Query: 125 QQSYP-----------------LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
              +                    G          R AV        + I++ ++HL + 
Sbjct: 123 IWDWKGEKAQRGERLRQEVIRIDTGLFIGTRDTEPRIAVVSHFIWGARHIFMANLHLTTL 182

Query: 168 CFLDSLENTYS-PSCSLLSQQAQWLKDWI----TQKKESLVPF--------VIAGDFNRK 214
                           +  QQ   + + I        E   P          +AGDFN  
Sbjct: 183 SREREGFPERDCLGAEIRGQQLDIVLNGIVSRYNHWCEKDNPIPSDDRPVWFLAGDFNAT 242

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
            N L         I   + L   P +        K  +  + +DY       Y F   ++
Sbjct: 243 ENSLEI-----AKIRRLNFLDLCPDKGTGTKRGKKGQKAALTLDYIFAGPAYYAF-DPQT 296

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ++L            +SDH PI   +
Sbjct: 297 VKQVLEETGRPPLYEVTVSDHYPIIAKF 324


>gi|148245026|ref|YP_001219720.1| exodeoxyribonuclease III [Candidatus Vesicomyosocius okutanii HA]
 gi|146326853|dbj|BAF61996.1| exodeoxyribonuclease III [Candidatus Vesicomyosocius okutanii HA]
          Length = 256

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 89/304 (29%), Gaps = 76/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+++ N+N +                 ++      + KN +AD+V LQE+  +   + +
Sbjct: 2   IRIITTNVNGIRA---------------AERKGFLNWIKNQNADVVCLQEIKATEEQLDE 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    +  +Y   +   +S                    + +  +  +  +  F     
Sbjct: 47  RFYPEEYHCYYQPAQKKGYSGTTIFTKQ-------TPIQVIKESPWKDINFEGRF----- 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +++N K   V+ I++ S     + +N      +           ++ + K S 
Sbjct: 95  -------IQVNFKNFSVISIYIHSGSAKQARQNLKMEFLTERFM------PYLQELKISG 141

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTID----PNDSLIRFPKEKDSRC-----------NA 247
              +I GD N         +      +    P +                          
Sbjct: 142 RKVIICGDMNIVHQERDIKNWKANQKNSGCLPEERAWLDKLFFKVGFIDGFREVNQEDQQ 201

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY ++  N    +   +             + KR SDH PI
Sbjct: 202 YTWWSNRGQAWANNIGWRIDYQILTPNLKGKVKNANI-----------YKNKRFSDHAPI 250

Query: 299 SIDY 302
            +DY
Sbjct: 251 IMDY 254


>gi|19553788|ref|NP_601790.1| extracellular nuclease [Corynebacterium glutamicum ATCC 13032]
 gi|62391431|ref|YP_226833.1| extracellular nuclease [Corynebacterium glutamicum ATCC 13032]
 gi|21325364|dbj|BAB99985.1| Predicted extracellular nuclease [Corynebacterium glutamicum ATCC
           13032]
 gi|41326772|emb|CAF21254.1| Predicted extracellular nuclease [Corynebacterium glutamicum ATCC
           13032]
          Length = 916

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 101/349 (28%), Gaps = 71/349 (20%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT----------------------T 51
           +     VA +  + S+N+       G      S  R                        
Sbjct: 479 LASINDVAGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEEALE 538

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYN------------------AVAKVFPKNTWCIFY 93
              + + +    LD D++ L+E+ +                    A+ +    + W    
Sbjct: 539 DQQSKIVEAINRLDVDVLGLEEIENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVE 598

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           S E+L           I  A    +  V+ + +S     A  + +           +  +
Sbjct: 599 SPEQLGTDEDY-----IRVAFIYDQTTVKPVGESRIFDDAAFTGTARQPLAQEFQPLNDS 653

Query: 154 GKKIWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIA 208
            K    +  H KS   +   +         + ++   QAQ L D +  + + +  P  I 
Sbjct: 654 EKSFVGVVNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFIL 713

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GD N              T+          +       + +       +D+ + ++ A K
Sbjct: 714 GDTNSYAKET-----AMTTLYGAGYTNIATEFDAG--YSYQFSGRIGSLDHALGNEAAMK 766

Query: 269 FLIQESFSEILYNEDDIKSRGKRL--------------SDHCPISIDYD 303
            +I     +I  +E       +RL              SDH PI + ++
Sbjct: 767 HVIDAEVWDINADEAIAFEYSRRLNNTSDVFENNVFRSSDHDPIKVGFN 815


>gi|295112781|emb|CBL31418.1| Metal-dependent hydrolase [Enterococcus sp. 7L76]
 gi|315145547|gb|EFT89563.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2141]
 gi|315162610|gb|EFU06627.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0645]
          Length = 254

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +         AI   ++ V+ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGDGQGEGLAILYNEQKVQTIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R  +  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRITLWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           Q      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 QY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|225012120|ref|ZP_03702557.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-2A]
 gi|225003675|gb|EEG41648.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-2A]
          Length = 257

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 88/306 (28%), Gaps = 74/306 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++++S+N+N +                         +  +  AD++ +QE+    A+ 
Sbjct: 3   KDLKILSYNVNGIRAALNKGF---------------ASWLDSTAADVICIQEI---KALE 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +                 +          ++ +A+  K           +   D   R  
Sbjct: 45  EQVDTAALEALGYHHFWFSAQ-----KKGYSGVAIFSKIKPTNVTFGCGIEHMDFEGRI- 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +  +  K+ ++ ++L S   +D              +     +++I   K+ 
Sbjct: 99  --------IRADFDKVSIMSLYLPSGTNID--------RLEYKFKFMAEFQEYIDLLKKE 142

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNA 247
               +I GD+N   + +  +D                          I   +  +   + 
Sbjct: 143 FPNLIICGDYNICHHAIDIHDPVRNKNVSGFLPEERKWLDGFITSGFIDSFRYLNPEPHH 202

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY ++ ++    + +                  + SDHCP+
Sbjct: 203 YSWWSYRANARNNNKGWRIDYALVSESLKDNINRA-----------YILPEAKHSDHCPV 251

Query: 299 SIDYDF 304
            ++ +F
Sbjct: 252 GVELNF 257


>gi|302866198|ref|YP_003834835.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|302569057|gb|ADL45259.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
          Length = 265

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/296 (10%), Positives = 63/296 (21%), Gaps = 52/296 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WNI T       +               +         D++ LQE         +
Sbjct: 2   LRVMTWNIRTGGRDGDGT----------DRRDRIVSVVTAQRPDVLALQE---------L 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +    +      S      A+ VR     +               R  + 
Sbjct: 43  RGMDATLGGLAGRLGMTPYLARSCFGQPVAVLVRPPLRVLRAGRVR---------RPFHH 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--QAQWLKDWITQKKES 201
            A  + V      + V   HL  +            + +L     +   L   +   + +
Sbjct: 94  AAARVQVATGAGPLTVFSTHLNPYSGGRRRMEADWLAAALRRTGGELALLAGDMNTLEPT 153

Query: 202 LVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDS------RCNA 247
                                           + +D     +      D           
Sbjct: 154 ADHTARLAGLATPYRRRHLRRDGRTVDTRAVARLLDAGLVDLWPWSGGDEPGGLTVPTRH 213

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  + +DY +                +              SDH P+  + D
Sbjct: 214 GGAEFAGMRLDYLLATPALADR--------VRAVRVVRDGDADSASDHYPVLAEVD 261


>gi|45658178|ref|YP_002264.1| hypothetical protein LIC12332 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45601420|gb|AAS70901.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 360

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 92/321 (28%), Gaps = 66/321 (20%)

Query: 23  KVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           K++++ WN+  L+                    S +        +  Y  + D D++  Q
Sbjct: 51  KIKVLVWNVQYLAGKKRIFWYDLPNGDGPDTGPSKEEIEETLKKVAGYIHSEDPDVILFQ 110

Query: 73  EMGS-------YNAVAKVFPKNTWCI------FYSTERLINHSKRDSNNDIHTAIAVRKK 119
           E+          + + ++  +           FY     + H K   +  +  A   + K
Sbjct: 111 ELHDGAENTFREDQLERILSRIGSEYVCRSEAFYWKSNFVPHPKILGSVGMKLATISKYK 170

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177
               ++ S PL+ A    ++    R  ++  + I  G K  VL+ HL +F       +  
Sbjct: 171 ISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIEGGDKFTVLNTHLDAFSQGTDTMHR- 229

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------------NYLGNN 221
                    Q + +   + +   +   +V+ GDFN                   +     
Sbjct: 230 ---------QVETITGLLKELDLAGHYWVLGGDFNLLPPGFDRKSMHPNGAFFYSDEQEI 280

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFS 276
              +   +           +  +                 IDY     N  +      + 
Sbjct: 281 KPLFDRWNSAVPFKILNGPEKEKYYTYYPNDPAIGKPDRTIDYIFYSSNLKQ----SGYK 336

Query: 277 EILYNEDDIKSRGKRLSDHCP 297
                  D K     +SDH P
Sbjct: 337 V------DQKDILWTISDHFP 351


>gi|220932969|ref|YP_002509877.1| Endonuclease/exonuclease/phosphatase [Halothermothrix orenii H 168]
 gi|219994279|gb|ACL70882.1| Endonuclease/exonuclease/phosphatase [Halothermothrix orenii H 168]
          Length = 281

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 80/279 (28%), Gaps = 64/279 (22%)

Query: 26  LVS-WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++ +NI+     +G             D   + +  K  D+DI+ L E+         F
Sbjct: 51  VITLYNIHHGVGIDG-----------RLDLDRIARVLKKTDSDIIGLNEV-DRGLKRSGF 98

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                 +    +    +       +     AV  K       + PL            R 
Sbjct: 99  QHQVQILARKLKMNYAYGPNLQTGEGSYGNAVLSKYPISEVINKPLP----VIDSTEKRG 154

Query: 145 AVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            ++ +V + G   + ++  HL             S       QQ +W+ ++    +    
Sbjct: 155 LLQAIVSLPGGPELKIMVTHL-------------STDFKEREQQLKWINEYTNNIE---T 198

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           PF++ GDFN++I            I+                    +   +  ID     
Sbjct: 199 PFILMGDFNQRIP----------AINLEGLYPLAT-----NVKTYPSTAPEELIDLVF-- 241

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     +F    Y  D         SDH P+ +  
Sbjct: 242 -------SNYNFRVEEYTIDT------MASDHLPVIVKL 267


>gi|294669077|ref|ZP_06734163.1| exodeoxyribonuclease III [Neisseria elongata subsp. glycolytica
           ATCC 29315]
 gi|291309069|gb|EFE50312.1| exodeoxyribonuclease III [Neisseria elongata subsp. glycolytica
           ATCC 29315]
          Length = 300

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADI+ +QE+ +  A    
Sbjct: 44  LKIISANVNGIRSAYKKGFY---------------EYIAASGADIICVQELKAQEA---- 84

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +   +  H         ++ +AV  K           +G          R
Sbjct: 85  ---DLSDEMKNPHGMHGHWHCA-EKRGYSGVAVYSKRAP----DNVQIGMGIEEFDREGR 136

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  K+ V+ ++L S       +        L  +        +   K    
Sbjct: 137 F-----VRCDFGKLSVISLYLPSGTSAPERQ-------ELKYRFLDAFYPMLEAMKAEGR 184

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 185 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGY 244

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 245 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 293

Query: 300 IDYDF 304
           ++YD+
Sbjct: 294 VEYDY 298


>gi|157736673|ref|YP_001489356.1| hypothetical protein Abu_0412 [Arcobacter butzleri RM4018]
 gi|157698527|gb|ABV66687.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
          Length = 313

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 101/324 (31%), Gaps = 56/324 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79
           K+R+ ++N+            K            +         ++ DIV  QE+ S + 
Sbjct: 2   KLRVGTFNLFQFCSPPFSFYTKKEKFTPEEWNEKIAWCKNQLNLMNCDIVGFQEVFSNDE 61

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +  +  +  +  ++         K++    I T +A+  K   +  +        D+ S 
Sbjct: 62  LKNLCLEVGFK-YFEVVDFAKVDKKNEKVYISTTVAIASKFPIINIEKI------DTKSF 114

Query: 140 AGNRRAVELLVEING-KKIWVLDIHLKSFCFLD--------------------SLENTYS 178
              R  ++ ++ +   K I V   HLKS    +                    +L++ YS
Sbjct: 115 KFARIPIKAIISLPNEKNITVYITHLKSNRENEFEYIFTKNDTLEDKLKKVEVALKDNYS 174

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR-----KINYLGNNDDFWKTIDPNDS 233
            S      +A+ L   I     +  P ++  D N       I+ L N   + K +  +D 
Sbjct: 175 LSLKQRINEAKILFYDIK---SNKTPTILMCDLNDKEFSITIDALTNKRFYNKNLKKDDY 231

Query: 234 LIRFPKEKDSR--------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
           L+                          +        +DY  + +   K     S+    
Sbjct: 232 LLFDAYYLHKPKIYNPHPEFKGIKRTPTSYFAGKGNILDYIFVSKELQK---ISSYEVFD 288

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
            +     +   + SDH  +  + +
Sbjct: 289 KHLQKNHNGSLKQSDHAQVVCEIE 312


>gi|149914379|ref|ZP_01902910.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. AzwK-3b]
 gi|149811898|gb|EDM71731.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. AzwK-3b]
          Length = 343

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/342 (12%), Positives = 88/342 (25%), Gaps = 62/342 (18%)

Query: 24  VRLVSWNINTLSEQEGVSL----WKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ ++N+                 +  +R           L      LDAD V + E  
Sbjct: 1   MRIATYNVEWFDALFDDEGALLADDDWSRRHGVTRADQLASLGIVFTALDADAVMVIEAP 60

Query: 76  SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   V    ++  F         +   ++     A+      +            K
Sbjct: 61  DDTDRRSTVAALESFADFAQIRARRAVTGFANDTQQEIALLYDPDVLSCAHDPKGEPTGK 120

Query: 135 DSFSRAGN-RRAVELLVEINGKK---------------------IWVLDIHLKSFCFLDS 172
              S A        + ++I+  +                       ++  HLKS     +
Sbjct: 121 KGSSDAPRFDGVFRIDLDIDDTEDLVAFSKPPLELACTTATGVAFRMIGAHLKSKAPHKA 180

Query: 173 LENTYS-----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------ 221
                       +      QA WL+  I +        ++ GD N               
Sbjct: 181 RSRDQIMRMAIANRRKQQAQAVWLRHRIEEHLAQGETLIVLGDLNDGPGLDEYEHLFGRS 240

Query: 222 ----------DDFWKTIDPNDSLIRFPK-----EKDSRCNANKNLRNKIPIDYFVMDQNA 266
                     D   +  DP+       +              +    +  +DY ++  + 
Sbjct: 241 SVEIVMGEGGDAAAQLFDPHARRALTRRIGAMIATARFYLPTEKRYLQALLDYIMVSSDL 300

Query: 267 YK----FLIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYD 303
                 + I   F +   +   +++      SDH P+++D D
Sbjct: 301 EARQPRWRIWHPFDDPGCFRIPELREALLAASDHFPVTMDVD 342


>gi|256845169|ref|ZP_05550627.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
 gi|256718728|gb|EEU32283.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
          Length = 279

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 97/307 (31%), Gaps = 38/307 (12%)

Query: 1   MIR-KYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M + K +L+++F L    +  S+A +  + S+NI  L                  D    
Sbjct: 1   MKKGKLLLSIIFALFFSLSVLSLADEAYIASFNILRLGV-------------AKKDIPQT 47

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAV 116
            +  +    DIV L E+ + + V ++  +         +  I+     S+    + A   
Sbjct: 48  VKILQGF--DIVGLVEVINRDGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYVY 105

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +K  V+ ++        K S      R       +I       + +H             
Sbjct: 106 KKDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------N 153

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                   + +   + D+   K +      IAGDFN       +    +K  D     I 
Sbjct: 154 NEAQRKAENFKMVDVYDYFQDKDKKENDIFIAGDFNL-YALDESFRPLYKHADKITYAID 212

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              +         N       D F   Q   +     S   + ++ D+ K   + +SDH 
Sbjct: 213 PAIKTTIGTKGRANSY-----DNFFFSQKYTQEFTGSS-GALDFSGDNPKLMREIISDHI 266

Query: 297 PISIDYD 303
           P+ I  +
Sbjct: 267 PVFIVVE 273


>gi|253686638|ref|YP_003015828.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251753216|gb|ACT11292.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 381

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 85/275 (30%), Gaps = 27/275 (9%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           ++       +    L+ADI+   E+ + + +     +      +S   +I+         
Sbjct: 111 SSQQRKNTGKIITLLNADILCAVEVENMDVLRDFNNQVLGDDKFSQFVMIDSPN--DPRG 168

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           I  A   R +  ++      +  A   F    +R  +E+ ++   K+  +  +       
Sbjct: 169 IDVACLTRYRIAQL---RTHIFDAGKRFDPVFSRDCLEVTLDAGLKQ-PIYILCNHFKSQ 224

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228
               E            QA+ + + + Q  +      VI GD N   +   ++     ++
Sbjct: 225 SGQTEEERLRGAEKRRDQAERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWHSLAPLFSL 284

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEI------ 278
                +I   + +  R         K      +DY  +    ++ +++            
Sbjct: 285 SDLHPVIDPERPEKERYTYYFAGGKKGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNID 344

Query: 279 ----------LYNEDDIKSRGKRLSDHCPISIDYD 303
                     +    ++ S     SDH  + ++ D
Sbjct: 345 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 379


>gi|224133800|ref|XP_002321664.1| predicted protein [Populus trichocarpa]
 gi|222868660|gb|EEF05791.1| predicted protein [Populus trichocarpa]
          Length = 366

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/340 (13%), Positives = 102/340 (30%), Gaps = 87/340 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++ ++WN N+L            + R  +++    ++  ++D D++ +QE+    A +
Sbjct: 47  EPLKFITWNANSL------------LLRVKNNWPGFSKFVSDIDPDVIVIQEVRMPAAGS 94

Query: 82  KVFPKNTWCI----------------FYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVL 124
           K  PKN+  I                  S+    N++   S  +  +   A+  K     
Sbjct: 95  KGAPKNSGEIKDDTNSSREEKKILMRALSSSPFGNYNVWWSLADSKYAGTALLVKKCFQP 154

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            +    L    S      R  +        K   +L+ +  +     +       S    
Sbjct: 155 VKVSFALDQTASKHEPDGRVILA-----EFKTFRLLNTYAPN-----NGWKEEEKSFQRR 204

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------------------------- 219
            +  + + + + Q  +   P +  GD N     +                          
Sbjct: 205 RKWDKRMLEVVVQLSDK--PLIWCGDLNVSHEEIDVSHPEFFSAAKVNGYVPPNKEDCGQ 262

Query: 220 ------NNDDFWKTIDPNDSLIRFP----------KEKDSRCNANKNLRNKIPIDYFVMD 263
                     F   +     +  +               S     K    ++ ID+F++ 
Sbjct: 263 PGFTLSERKRFGAILKEGKLIDAYRFLHKERDMERGFSWSGNPIGKYRGKRMRIDFFIVS 322

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +     +IQ            I+  G   SDHCP+S++  
Sbjct: 323 EKLKDRIIQCEMH-----GHGIELEGFYGSDHCPVSLELS 357


>gi|56416778|ref|YP_153852.1| exodeoxyribonuclease III [Anaplasma marginale str. St. Maries]
 gi|56388010|gb|AAV86597.1| exodeoxyribonuclease III [Anaplasma marginale str. St. Maries]
          Length = 276

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 81/313 (25%), Gaps = 76/313 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WN+N                        L         DI  LQE    +     
Sbjct: 2   IRILTWNVN----------------SVRKRVAHLCSVLTEHHVDIALLQETKCTDD---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------LQQSYPLLGAK 134
                     +    + +            +A+  K   V          ++    +   
Sbjct: 42  ------QFPLAELEDLGYKCYIHGQKSRNGVAILSKYPIVGELCNTVFDAEEEIGTVQDT 95

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S+S    R  +E LV+    K+ V  +++ +   +D+    Y  +     +        
Sbjct: 96  GSYSVTEARY-LECLVDYQDVKVRVASVYVPNGQEVDTETFVYKLNFLRCLKARLLKLLA 154

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP----------------NDSLIRFP 238
                      VI GD+N   + +   D   + +D                 +       
Sbjct: 155 REDW------LVIGGDYNVAPDDIDVYDA--QALDGKLCFHPKERAGLREILHLGFTDAF 206

Query: 239 KEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +              +           ID+ ++  NA   L++ S               
Sbjct: 207 RILHEGKQEFSWWNYREGSWQRNRGMRIDHLLLSPNAVDKLVECSI-------LSSVRGL 259

Query: 290 KRLSDHCPISIDY 302
           +  SDH P+    
Sbjct: 260 ESPSDHAPVMCVL 272


>gi|294055155|ref|YP_003548813.1| exodeoxyribonuclease III Xth [Coraliomargarita akajimensis DSM
           45221]
 gi|293614488|gb|ADE54643.1| exodeoxyribonuclease III Xth [Coraliomargarita akajimensis DSM
           45221]
          Length = 262

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 71/301 (23%), Gaps = 70/301 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWN+N L                         +  +   D++ LQE      +   F 
Sbjct: 6   LLSWNVNGLRAVLKKGFD---------------DFLASQQPDVLCLQETKISADLTADFA 50

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
              +   Y                 ++  A+  +   +  +    +   D   R      
Sbjct: 51  FAGYPYVYWNCAEK---------KGYSGTAIISQIEPISVRYGLGIEKHDQEGR------ 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++    +  +++ ++  +    D  +         L     +L     +  E   P 
Sbjct: 96  ---VITAEFEDYYLVTVYTPNSQNHDENKRPRRLDYRTLEWDVDFLA--YVKGLEVTKPV 150

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           V  GD N                           +  I     +  F      R      
Sbjct: 151 VFCGDLNVAHTEIDLANPKTNRKNAGFTDEERGRFDAIIEAGFIDTFRHLYPDRTEQYSW 210

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           IDYF +       +   +                  SDHCP+ + 
Sbjct: 211 WSYRAAARQRNIGWRIDYFCVSDAVKNQIRDATILADTL-----------GSDHCPVGLR 259

Query: 302 Y 302
            
Sbjct: 260 L 260


>gi|254439233|ref|ZP_05052727.1| exodeoxyribonuclease III (xth) subfamily [Octadecabacter
           antarcticus 307]
 gi|198254679|gb|EDY78993.1| exodeoxyribonuclease III (xth) subfamily [Octadecabacter
           antarcticus 307]
          Length = 262

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/306 (10%), Positives = 73/306 (23%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN++  +EG+                + +       D++ LQE  S   +  
Sbjct: 2   SFTLATWNINSVRLREGL----------------VARLMTEEAPDVLCLQECKSPVDLIP 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +            + L  H         +  +A+  K       +   +    +      
Sbjct: 46  L---------EQFQALGYHHMVARGQKGYNGVAIFSKMAIEEVAAEDFVSLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +   +E     + V + ++ +    D      +            ++D+        
Sbjct: 93  ---IAGKLENG---VTVHNFYVPAG--GDKPNREINEKFGQKLDYLTEMRDYFRANAPEK 144

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GD N         D                    +      +   +      N 
Sbjct: 145 S--ILVGDLNIAPREDDVWDHKKLLKVVSHTTVEVEHLADVQGAGDWVDVTRADIPDGNL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                        ++ SDH P
Sbjct: 203 YSWWSYRAPDWDTADKGRRLDHIWATPDIANSAHSS-------RVIRAVRGWEQPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFAMFD 261


>gi|163782364|ref|ZP_02177362.1| exodeoxyribonuclease III [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882397|gb|EDP75903.1| exodeoxyribonuclease III [Hydrogenivirga sp. 128-5-R1-1]
          Length = 258

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 75/301 (24%), Gaps = 73/301 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                   +   LL  + +    D++ LQE+         
Sbjct: 1   MKIATYNVN----------------SIKARKELLFSWLEREPVDVLCLQELKQEE----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y       +         +  + +  K      +     G  D +     R
Sbjct: 40  -----KNFPYGEFEERGYRCEVFAQKTYNGVCICSKLPMEDVRK----GFGDEYFDQQKR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++     +I V++++        + +  Y             L  +++       
Sbjct: 91  -----VISAKVGEIRVINVYAPHGDLRGTEKFYYKLEFYDR------LLRYLSDNFSPEE 139

Query: 204 PFVIAGDFNRK----------------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P  + GDFN                         + F + +      I   +        
Sbjct: 140 PICMVGDFNVAREDIDVFDPELLKDTIGTMKEEREAFERVLK--WGFIDAFRYLYPDRVQ 197

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + IDY ++ +     L +               R  + SDH P+
Sbjct: 198 FTWWDYIGGMIWKDKGMRIDYILITEPLLGKLKEVYVDLWPRK-----RRTPKPSDHAPV 252

Query: 299 S 299
            
Sbjct: 253 I 253


>gi|330817173|ref|YP_004360878.1| Endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3]
 gi|327369566|gb|AEA60922.1| Endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3]
          Length = 289

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 88/305 (28%), Gaps = 54/305 (17%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------------G 75
           WN+    +  G    +  + RT ++   L  +      D++ LQE+              
Sbjct: 6   WNVQWGRDASG----RVDLGRTVAEARALADF------DVLCLQELTRGFDSLPGGPGAD 55

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAK 134
            +  +A + P  T     + +  ++  +  +         A+  +        + L    
Sbjct: 56  QFAELAALLPGYTVIEALAVDLPLDPGQAAAGAPRRQFGNAIATRLPVGRILRHTLPWPA 115

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D    +  R A+E  ++     + V+  HL+ +     +      +     ++A      
Sbjct: 116 DDSVPSMPRVALEANLQTAHGPLRVVTTHLEFYSGAQRM--AQVEALREQHREAIDHARH 173

Query: 195 ITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               +++   F         V+ GDFN                     +  +      + 
Sbjct: 174 PASAEKTGSAFTASARARDAVVCGDFNSAWRDDAYRRLLAPIDGAPAFVDAWMHAHPGKT 233

Query: 246 NANK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                         +  +  D+  + +   + +++                  R SDH P
Sbjct: 234 PPPTAGVHDTEQWRQGSLTCDFVFVTETLRERILRCEIDSTT-----------RASDHQP 282

Query: 298 ISIDY 302
           I ++ 
Sbjct: 283 ILLEL 287


>gi|320104698|ref|YP_004180289.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
 gi|319751980|gb|ADV63740.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
          Length = 375

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/336 (11%), Positives = 82/336 (24%), Gaps = 57/336 (16%)

Query: 1   MIRKYVLALVFFL--------VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-- 50
           MI   +L ++            P      +   +  WN+  L +        + ++    
Sbjct: 43  MIALVLLIVLVTTPRQDGVGRSPVIQPGGEGYLVCFWNVENLCDDTNDFKNTDPIEDWFA 102

Query: 51  ------TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100
                      LL +    ++     D++ L E+ +  AV ++                +
Sbjct: 103 TNPRALAHKLDLLAETLLAMNGGRGPDLLALVEVENRRAV-ELLRDRLHRELPPELHYRH 161

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
               D         A+  +                     G RR ++ +VE++G ++ VL
Sbjct: 162 LVHHDLTTGRRVEPAILSRLPI----------NPARTRTFGQRRILQAVVEVDGDELAVL 211

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-- 218
             H  S                   +  + L+             ++ GDFN        
Sbjct: 212 VAHWTSRLTDQEGT-KRLEYGLACLEAVEALRRL-----NPAADVLVMGDFNDHPQDRSL 265

Query: 219 -------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                   +                    +               +D+ V+         
Sbjct: 266 TEGLRAGPSPSAIDADGTLFRLWNLMTLIEPGTAGTYWYRGGWEILDHLVVSPGLVDQRG 325

Query: 272 QESFSEILYNEDDIKSRGKR-----------LSDHC 296
            +   + L   D+   R  R            SDH 
Sbjct: 326 WQVLPKTLTLGDNSDRRPLRFGGPNHQEPRGPSDHL 361


>gi|239983300|ref|ZP_04705824.1| exonuclease [Streptomyces albus J1074]
 gi|291455127|ref|ZP_06594517.1| exonuclease [Streptomyces albus J1074]
 gi|291358076|gb|EFE84978.1| exonuclease [Streptomyces albus J1074]
          Length = 259

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 74/304 (24%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L  + ++   D++ +QE  +       
Sbjct: 1   MRIATWNVN----------------SITARLPRLLAWLESSGTDVLCIQETKTTEEA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +            +A+  +   +      L G  +       R
Sbjct: 42  -------FPADALAELGYESAVRATGRWNGVAIVSRAG-LDDVVGGLPGGPEYDGVEEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +      Y        Q  + L+D +        
Sbjct: 94  A-----ISATCGPVRVWSVYVPNGREVGHPHFAYK------LQWLKALRDAVADDAAGGR 142

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GD+N   +                     +    +         P+         
Sbjct: 143 PFAVLGDYNIAPHDTDVWDPTAFIGATHVTPEEREALAALRATGLDDVVPRPLKYD-QPF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +                   D  + +GK  SDH P+ 
Sbjct: 202 TYWDYRQLGFPKNRGMRIDLVYGNDPFRAA-------VSDAYVDREERKGKGASDHAPVV 254

Query: 300 IDYD 303
            D  
Sbjct: 255 TDLT 258


>gi|27881735|gb|AAH43839.1| LOC398451 protein [Xenopus laevis]
          Length = 303

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 84/304 (27%), Gaps = 37/304 (12%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DA 66
           L+F    C    A  +R+ S+N+ +  E             T  D   +    + +    
Sbjct: 12  LLFLCAICV-PDALGLRICSFNVQSFGE-------------TKRDKPAVMNVVRMIISRC 57

Query: 67  DIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           DI  L E+   +      +                 +     R S  + +     RK  V
Sbjct: 58  DITLLMEIKDSSDTVIRSLMTQLNSQPETRNQFDLTISQRLGRKSYKEQY-GFIYRKNLV 116

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            V +++Y  +  +     A +R    +  +     +    I  +      + E       
Sbjct: 117 SV-KETYQYMDLQPGDEDAFSREPYVVWFQAPSTDVKEFVIIPQH----TTPEAAVREID 171

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            L        + W          F+  GD N   +Y+         +  +   +    + 
Sbjct: 172 ELYDVYLDVKEKW------DSENFIFMGDLNAGCSYVPKKSWKNIRLRNHTEFVWLIGDN 225

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPIS 299
                 +        I   V+       ++  S S   +      +  + L  SDH P+ 
Sbjct: 226 KDTTVKSSTNCAYDRI--VVVGDKLISSIVPTSASVFDFMAAYGLTEEQALEVSDHFPVE 283

Query: 300 IDYD 303
           +   
Sbjct: 284 VQLT 287


>gi|299139581|ref|ZP_07032755.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX8]
 gi|298598509|gb|EFI54673.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX8]
          Length = 1327

 Score = 81.9 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/337 (11%), Positives = 89/337 (26%), Gaps = 56/337 (16%)

Query: 14  VPCTASVAQKVRLVSWNINTL---------------SEQEGVSLWKNSVKRTTSDYTLLR 58
           +    +  ++  + S+NI                             +    +     L 
Sbjct: 594 LLAAPTPGKQFTVASFNIERFYNTSSTDNLYFVPSSGTTATSEAATLTPAAYSRRLQKLS 653

Query: 59  QYAKNL--DADIVFLQEMGSYNAVAKVFPKNT-----WCIFYSTERLINHSKRDSNNDIH 111
              +N+    DIV ++E+ + +    +  +         ++                 I 
Sbjct: 654 LAIRNVLNTPDIVTIEEVENQSVATDIANQINSDAGVPNLYTGYSTDNTTYFTQDGTGIS 713

Query: 112 TAIAVRKKNVRVLQQS--------YPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVL 160
               V+   V  L  +         P                +   ++    +   + V+
Sbjct: 714 VGFLVKNSTVDQLSVTQFGQGETFTPTTSNSPITLNDRPWMVLSAGIKRAGASDYPVTVI 773

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             H+K+   +DS  +T +     L  QA+ +  +I   + +    +  GDFN      G 
Sbjct: 774 VNHMKALTGVDSTTSTSTRQKKEL--QAEDIAKYIQTLQAAGKHVISGGDFNAFEFSDGY 831

Query: 221 NDDFW------------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            D                       +     +        S   +     +   +D+ V+
Sbjct: 832 TDTLATYTNVNILPSDQVVQPGTAGLVTPSLVDLALNMAPSDRWSYVEDGDAQILDHMVV 891

Query: 263 DQNAY---KFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +F+     ++      +  +   R SDH 
Sbjct: 892 TPELAAGTQFVYAHLDADFPLTAYNDATTPARTSDHD 928


>gi|281421496|ref|ZP_06252495.1| AP endonuclease domain protein [Prevotella copri DSM 18205]
 gi|281404568|gb|EFB35248.1| AP endonuclease domain protein [Prevotella copri DSM 18205]
          Length = 365

 Score = 81.9 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 88/303 (29%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N      Q   +   N              Y +  DADIV LQE    +     
Sbjct: 101 IKVLSYNTWNFGAQTEDAEGTNIC----------IAYLQEQDADIVCLQEACPTS----- 145

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +N   I    + +  +     + +    + +  K   + ++  P     +        
Sbjct: 146 --RNIEQIDSMLKPMYAYQDTTMHVNGGNCLMLLSKYPILSKERIPYESKGNMS------ 197

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------------------------P 179
             V   +++  +++ +++ HL++          +                          
Sbjct: 198 --VAYRLKVKDREVLLINNHLETTGLSLEDRRQFKNLVIGKLQVDTAEETSKLLVVKLAE 255

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +    + +A+ +  +I Q        ++ GDFN       +           D    +  
Sbjct: 256 ATKKRAPEAEAVAKYIQQH--KEQSIILCGDFNDGPISYAHRTI------AKDLTDCYIA 307

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             +    +  +    + ID  +   +         +       DD  +    +SDH PI 
Sbjct: 308 SGNGPGISYHHGGFFVRIDNIMCSDD---------WEPYECKVDDKIA----VSDHYPII 354

Query: 300 IDY 302
              
Sbjct: 355 CKL 357


>gi|238502697|ref|XP_002382582.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           flavus NRRL3357]
 gi|220691392|gb|EED47740.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           flavus NRRL3357]
          Length = 438

 Score = 81.9 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 87/313 (27%), Gaps = 35/313 (11%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R          V   A+  Q   ++S+N+  L      +         +     +    
Sbjct: 1   MRSIAYLASGLPVALAATSGQ-FDVLSFNVAGLPAILNGNEVPGDKTNNSK---AIGAKF 56

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              D D++ +QE  +Y+A         +            +   +              V
Sbjct: 57  AEYDYDVIHVQEDFNYHA---------YIYETDDHPYRTATSGGAGIGSGLNTLANYPWV 107

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180
              +  +              +    + V  + G  +   ++H  +    D +    +  
Sbjct: 108 DFERVKWETCSDASGSDCLTPKGFTTMRVRFDEGVYVDFYNLHTDAGSETDDVTARSAN- 166

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIR 236
                   Q + D+I     +    ++ GD N +    G N   +       +P   LI 
Sbjct: 167 -------LQQVADYI-GNNSAGNAVLVFGDTNARYTSSGENIRVFGTEQNMTNPWVELIL 218

Query: 237 FPKEKDSRCNAN-----KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              E     +               +D      +     I+ S +   Y     +  G  
Sbjct: 219 NGVEPTEGTDPWMCDNPTTNNTCETVDKIFYRGS---RSIELSATFWSYVGTKFELDGHI 275

Query: 292 LSDHCPISIDYDF 304
           LSDH P++ ++ +
Sbjct: 276 LSDHNPVTSNFTW 288


>gi|28211273|ref|NP_782217.1| exodeoxyribonuclease III [Clostridium tetani E88]
 gi|28203713|gb|AAO36154.1| exodeoxyribonuclease III [Clostridium tetani E88]
          Length = 260

 Score = 81.9 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 80/308 (25%), Gaps = 81/308 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
           K+R+ SWN+N L      + +               ++ +    D+  LQE  +  +   
Sbjct: 3   KMRIFSWNVNGLRAIAKKNFF---------------KWVEEEKPDVFCLQETKIQDHQLE 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +     +  ++S      +S   +                   +S       + F   
Sbjct: 48  DNLKNIEGYKSYFSFAEKKGYSGVATYTK-------------TEPKSVLNGIGIEEFDNE 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G       ++    ++  +L+I+  +    D   +               + D+      
Sbjct: 95  GR------VLISEFEEFTLLNIYFPNGQMNDERLDYKLRFY-------DAILDYCNDLVS 141

Query: 201 SLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244
                +I GD+N     +                   +   K I+     +   +     
Sbjct: 142 KGKKLIICGDYNTAHREIDLKNPKNNEKYSGFLPIEREWIDKFINNG--YVDVYRNFYPE 199

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDYF +  N    +        +             SDH
Sbjct: 200 KVEYSWWSYRFKARERNAGWRIDYFFVSDNVLPLIKDTKIHTEVL-----------GSDH 248

Query: 296 CPISIDYD 303
           CPI +  D
Sbjct: 249 CPIELILD 256


>gi|116052214|ref|YP_788942.1| putative exonuclease III [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587435|gb|ABJ13450.1| putative exonuclease III [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 266

 Score = 81.9 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ ++N+N                   +    L  + +    DIV LQE+ + +A  
Sbjct: 2   DTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  ++ + L+    L G         
Sbjct: 44  --------RFPAAALERAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV          + V  ++L +       +  Y  +        + L     +  ES
Sbjct: 96  LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMES 141

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+AGDFN   +     D               + ++ +     +    +    R  
Sbjct: 142 GHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRI 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ ++  +    L            D      +  SDH P 
Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254

Query: 299 SIDY 302
            +  
Sbjct: 255 WVSL 258


>gi|327294443|ref|XP_003231917.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Trichophyton rubrum CBS 118892]
 gi|326465862|gb|EGD91315.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Trichophyton rubrum CBS 118892]
          Length = 802

 Score = 81.9 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/363 (10%), Positives = 96/363 (26%), Gaps = 84/363 (23%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K  ++++N   +  +  +      +          LL    +  DADIV LQE+   + 
Sbjct: 417 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 476

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++  S  +              K + + +         
Sbjct: 477 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 536

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++V     ++G++I V++       +  + ++     
Sbjct: 537 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVN---AHIYWDPAYKDVKLVQ 593

Query: 181 CSLLSQQAQWLKD---------------------------------------WITQKKES 201
            +++ ++   L +                                        +     S
Sbjct: 594 SAIMMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETINSENTSPPTPVEPSPSVEYSSPS 653

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245
            +P ++ GDFN + +                    D  +  +        F  +      
Sbjct: 654 QIPILVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRDRLYGNLTRQGMTHPFTLKSAYSAI 713

Query: 246 ----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISI 300
                 N        IDY     N  +        +  Y +           SDH  +  
Sbjct: 714 GELSFTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMA 773

Query: 301 DYD 303
           ++ 
Sbjct: 774 EFS 776


>gi|226289942|gb|EEH45426.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Paracoccidioides brasiliensis Pb18]
          Length = 771

 Score = 81.9 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/360 (10%), Positives = 85/360 (23%), Gaps = 75/360 (20%)

Query: 20  VAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +K   +S+N      +  +      +          LL    K  +ADIV LQE+   
Sbjct: 382 QNEKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLLLNEIKGYNADIVCLQEIDQG 441

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL- 131
           +       +  +  +         ++     +              K + + +       
Sbjct: 442 SYHGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQ 501

Query: 132 ---------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYS 178
                    G  D ++R   +  + ++      ++G+++ V+++HL        ++   +
Sbjct: 502 TAVRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQA 561

Query: 179 PSCSLLSQQAQWLKDWITQKKESLV---------------------------------PF 205
                   Q       I    +                                    P 
Sbjct: 562 AILMEEVTQLAEKYAKIPACIDKTAFRFSEPENSTDGDGTATPAEPAPSVEYSSGSQIPL 621

Query: 206 VIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
           +I GDFN                  ++       +  +        F  +          
Sbjct: 622 IICGDFNSYPGSAVYELMNRGHLIEDHPDLEKRLYGNLSRLGMSYPFNLKSAYGAIGELE 681

Query: 246 NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             N        IDY      +     +                     SDH  I  ++ F
Sbjct: 682 FTNYTPDFADVIDYIWYTSNSLQVTGLLGEVDREYLQRVPGFPNYHFPSDHLAIMAEFSF 741


>gi|109082640|ref|XP_001090240.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 8
           [Macaca mulatta]
 gi|90078218|dbj|BAE88789.1| unnamed protein product [Macaca fascicularis]
          Length = 318

 Score = 81.9 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  ++  +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRHCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTTYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|301309757|ref|ZP_07215696.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300831331|gb|EFK61962.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 628

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 86/310 (27%), Gaps = 66/310 (21%)

Query: 1   MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M + ++ A+V    +P   ++AQ         +R++S+NI      + V+          
Sbjct: 10  MRKWFIWAIVLIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 59

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D   + +  + +  D+V +QE+ S    +            +      ++     +   
Sbjct: 60  -DLGRIAEAIRKVAPDVVAVQEVDSVTGRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 117

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K   V  +   L G      R   R  + +  E    +      HL       
Sbjct: 118 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 164

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                   S  +L ++A            +  P  IAGD+N   +           I   
Sbjct: 165 ---EDRMLSLPILRREAA----------SAHKPLFIAGDWNATAHSP--------FITEI 203

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               +                    +DY        +   + S                 
Sbjct: 204 SKDFQLLSNPKQATFPASTPD--SCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 252

Query: 292 LSDHCPISID 301
            SDH P+  +
Sbjct: 253 ASDHRPVVTE 262


>gi|219883168|ref|YP_002478330.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425]
 gi|219867293|gb|ACL47631.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425]
          Length = 352

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/353 (11%), Positives = 105/353 (29%), Gaps = 72/353 (20%)

Query: 21  AQKVRLVSWNINTL-----SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           A+  R+ ++N+  L           +      +        + +  K  + D+V LQE+ 
Sbjct: 2   AKSFRIATFNVENLLHPGVFFAGRPNDRPYQPELYKEKIDWIVRILKEGNVDLVGLQELF 61

Query: 76  SYNAVAKVFPKNTWCIFYSTERLIN------HSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           S  A+  +  +  +   Y+ + L           +         +    K   V ++S  
Sbjct: 62  SETALKDIAEQAGFPHSYAPDLLNGANIATREDGKQEARGPFVGLL--SKFPIVDRKSIV 119

Query: 130 LLGAKDSFSR----------------AGNRRAVELLVEINGK---KIWVLDIHLKSFCFL 170
               +                        R  ++  V++N      ++V  +  K+  FL
Sbjct: 120 DFPGETKGIEIEAGESTTEVKKLPIIRFLRPVIQANVQLNSDVIATVFVAHLKSKNPQFL 179

Query: 171 DSLENTYS----------PSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINY-- 217
           DS +   +           S  + + ++  L+  +    + +  P ++ GD N  +    
Sbjct: 180 DSEDGRRNDPIVKAAGKTRSLIIRAAESVALRKMVVDATQNNNQPVLLFGDLNDDLPAVT 239

Query: 218 --------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
                           +    W  +  +   +   +   +    +        +D+  + 
Sbjct: 240 TEIIVGDEPYRFAKPEDKKIEWDRLLYSVHDLEEQESYRNVSYTHIFNGRYELLDHIFVS 299

Query: 264 QNAYKFLIQESFSEILYNE-DDIKSRGKRL----------SDH-CPISIDYDF 304
           Q  +    +           +D     +R+          SDH  P++ + ++
Sbjct: 300 QEFFHRNPESIAVVRSTRIFNDHLQDERRVVNPDRGLSSRSDHGIPVT-EIEW 351


>gi|149922823|ref|ZP_01911246.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1]
 gi|149816290|gb|EDM75794.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1]
          Length = 280

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/308 (10%), Positives = 80/308 (25%), Gaps = 70/308 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + +  + ++SWNIN L                         +      DIV +QE+    
Sbjct: 13  TSSDALTVLSWNINGLRAAAKKGFG---------------AWLAECGGDIVGVQEI---- 53

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              + F +         E   +H +       ++ + +  +           +   ++  
Sbjct: 54  ---RAFKEQLDDATAEPEGWHSHFRSAV-RPGYSGVGLYSRAP----ADKVEVELGEARF 105

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  +         +++V +++  +     +  +  +          + + + + +K
Sbjct: 106 DDEGRVQLA-----RFGRLFVANVYFPNG----NGRDRDNSRVPYKLDFYRAVFELVERK 156

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSR 244
           +      ++ GDFN     +                              I   +  +  
Sbjct: 157 RRGGYRVLVMGDFNTAHEAIDLARPKQNVKTSGFLPEEREELDRWIRAGWIDTFRSLEPG 216

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY +   N              +  +         SDH
Sbjct: 217 PGHYSWWSQRGTARERNVGWRIDYVLASPN-----------VEPFLREAFIWPEVPGSDH 265

Query: 296 CPISIDYD 303
           CP+ +  D
Sbjct: 266 CPVGVRLD 273


>gi|313632791|gb|EFR99747.1| exodeoxyribonuclease III [Listeria seeligeri FSL N1-067]
          Length = 251

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y  ++DADI  LQE     A    
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFDSVDADIFCLQETK-LQAGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++      K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTXXFTKKEPLSVQYGLGIEEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                        +  ++ +  +   
Sbjct: 91  -----VITLEFEKFFMVTVYTPN-------SQAELKRLDYRMTFEDAILAYVKK-LDETK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTAFLEAGFVDSFRYFYPDLEDAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +     L+       +             SDHCP+ 
Sbjct: 198 SWWSYRMNARARNIGWRIDYFVVSERLKDNLVDAKIHPDVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           ++ +
Sbjct: 247 LELN 250


>gi|291165919|gb|EFE27966.1| exodeoxyribonuclease III [Filifactor alocis ATCC 35896]
          Length = 251

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                         + K  DADI  LQE          
Sbjct: 1   MKLISWNVNGIRACVKKGF---------------LDFFKETDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D   R    
Sbjct: 45  LELEGYHQYWN----------YAERKGYSGTAIFTKQEPLSVSYGLGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +        +               L +          
Sbjct: 91  -----VITLEFDNFYMVTVYTPNSKNELLRLDYRMVWEDEFRSYLLRLNE--------TK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                       T+  +  +  F         A 
Sbjct: 138 PVIVCGDLNVAHQEIDLKNPKTNQKNAGFTIEERTKMSTLLDSGFIDTFRFFYPELEGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  Q   + L        +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLTSQELKENLKDAKIHSDIL-----------GSDHCPVE 246

Query: 300 IDYDF 304
           +D ++
Sbjct: 247 LDIEW 251


>gi|26398003|sp|P59115|PHL1_LEPIN RecName: Full=Sphingomyelinase C 1; AltName: Full=Sphingomyelin
           phosphodiesterase 1; Short=SMase 1; Flags: Precursor
          Length = 597

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 26/302 (8%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P ++S    ++++S +I        +S W +  +   +       Y K  + DI+  + +
Sbjct: 115 PNSSSADIGIKILSHSI--FMAPTNLSSWGDLGQEERAQRIASSSYIK--NQDIIVFEGL 170

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQ 126
              NA   +  K      Y T  +    K  +               + +  K     + 
Sbjct: 171 SHNNAEKILLEKIRSEYPYQTNVVGRTKKGWNATLGAYTTSPMANGGVIIVSKWPIEEKV 230

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y    +     +  N+    + +  +GKK  V+   L++          ++   ++   
Sbjct: 231 QYIFNNSNCGQDQYYNKGFAYVKINKDGKKFHVIGTQLQAREPDC-----FNSGETIRKL 285

Query: 187 QAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           Q   +K +I  +        +I GD N         D   K        +  P   D++ 
Sbjct: 286 QLNDIKSFIDSKDIPKDETVLITGDLNIIKGSNEYFDMISKLNVNEPRYVGVPFTLDTKT 345

Query: 246 NANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCP 297
           NA           I +DY ++ +   +  + ++ +    +    K          SD  P
Sbjct: 346 NALAAYYYEKEKPIYLDYILVSKLHAQPPVWQNLAYDPISNTTWKRSDGYTSYEFSDRYP 405

Query: 298 IS 299
           + 
Sbjct: 406 VY 407


>gi|307324263|ref|ZP_07603471.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113]
 gi|306889994|gb|EFN20972.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113]
          Length = 282

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 76/307 (24%), Gaps = 71/307 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78
            + + + + N+N L                         +     AD+V LQE+      
Sbjct: 14  PEVLTVTTVNVNGLRAAAKKGFGP---------------WLDATAADVVCLQEVRAEPKE 58

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               V   + W + ++           +       ++V  +      +        D   
Sbjct: 59  LPEAVREPDGWHVVHAP----------AAAKGRAGVSVYARRELEGVRVGFGSSEFDGSG 108

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R        + V++ G  + V  ++L S       ++      +      + L++     
Sbjct: 109 R-------YVEVDLPG--VTVGSLYLPSGEVGTDRQDEKERFMAEFLPYLKELRERA--- 156

Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
                  ++AGD+N                                +    +        
Sbjct: 157 AAGGREALVAGDWNIAHQEADLKNWKANQKKSGFLPEERAWLTSVFEEAGYVDVVRALHP 216

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           IDY +         ++          +   +  +R S
Sbjct: 217 DVAGPYSWWSYRGRAFDNDAGWRIDYQIATPGLAGRAVKA-------VVERAPAYDQRWS 269

Query: 294 DHCPISI 300
           DH P+++
Sbjct: 270 DHAPVTV 276


>gi|294787015|ref|ZP_06752269.1| exodeoxyribonuclease III [Parascardovia denticolens F0305]
 gi|315226658|ref|ZP_07868446.1| exodeoxyribonuclease [Parascardovia denticolens DSM 10105]
 gi|294485848|gb|EFG33482.1| exodeoxyribonuclease III [Parascardovia denticolens F0305]
 gi|315120790|gb|EFT83922.1| exodeoxyribonuclease [Parascardovia denticolens DSM 10105]
          Length = 277

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 74/306 (24%), Gaps = 56/306 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ V+WNI++L+        ++ + R       +          +  +QE     A    
Sbjct: 1   MKFVTWNIDSLNAALTGDSERSRLSR------QVLHDIAACSPQVFAIQETKLPAAGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142
             K +    +    +   S ++     +       +                     +  
Sbjct: 55  KQKASLESIFPGYWIAWRSSQEPARKGYAGTMCLYRPEGGQEVSPLYPQIGAPEPMDSEG 114

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    L +E  G   ++ D++  +                      Q L           
Sbjct: 115 R---ILTLEFPG--FYLTDVYTPNSGDGLRRLEERQVWDDRYRSYLQDLDQV-------- 161

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +  GDFN                         D +  +        F +   ++   
Sbjct: 162 KPVIACGDFNVAHEEIDLAHPASNRRSAGFTDEERDKFGQLLDAGFADTFRRLHPNQAGV 221

Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            IDY+++       +   S  +                DH P
Sbjct: 222 YTWWAQRAVTSKANNSGWRIDYWLVSDRLMDKVRGVSVMDTGERR-----------DHAP 270

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 271 LVMEID 276


>gi|77464426|ref|YP_353930.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
 gi|221640316|ref|YP_002526578.1| Exodeoxyribonuclease III Xth [Rhodobacter sphaeroides KD131]
 gi|332559315|ref|ZP_08413637.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N]
 gi|77388844|gb|ABA80029.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
 gi|221161097|gb|ACM02077.1| Exodeoxyribonuclease III Xth [Rhodobacter sphaeroides KD131]
 gi|332277027|gb|EGJ22342.1| exodeoxyribonuclease III [Rhodobacter sphaeroides WS8N]
          Length = 262

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 69/306 (22%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       L+ +       DI+ LQE  S      
Sbjct: 2   TFTLATWNIN----------------SVRLREALVSRLLTEEMPDILCLQECKSPV---- 41

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +   L  H         +  +A+  K   V    +       +      
Sbjct: 42  -----EKMPLEAFRALGYHWCVARGQKSYNGVAILSKLPLVDAGDHDFADLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   +E     + + + ++ +    D  +   +            ++DW        
Sbjct: 93  ---VSAALENG---VTIHNCYVPAG--GDIPDREQNVKFGQKLDYLTRMRDWCRADTPKK 144

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GD N                  ++     D    +    + I   ++       
Sbjct: 145 A--ILVGDLNIAPREDDVWNHKSLLKIVSHTPIEVDHLNALMEAGAWIDVTRKDLPEGRL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                         + SDH P
Sbjct: 203 YSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHGS-------RILKAARGWLQPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|45658469|ref|YP_002555.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
 gi|73921746|sp|Q72P44|PHL1_LEPIC RecName: Full=Sphingomyelinase C 1; AltName: Full=Sphingomyelin
           phosphodiesterase 1; Short=SMase 1; Flags: Precursor
 gi|45601712|gb|AAS71192.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 596

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 26/302 (8%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P ++S    ++++S +I        +S W +  +   +       Y K  + DI+  + +
Sbjct: 114 PNSSSADIGIKILSHSI--FMAPTNLSSWGDLGQEERAQRIASSSYIK--NQDIIVFEGL 169

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQ 126
              NA   +  K      Y T  +    K  +               + +  K     + 
Sbjct: 170 SHNNAEKILLEKIRSEYPYQTNVVGRTKKGWNATLGAYTTSPMANGGVIIVSKWPIEEKV 229

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y    +     +  N+    + +  +GKK  V+   L++          ++   ++   
Sbjct: 230 QYIFNNSNCGQDQYYNKGFAYVKINKDGKKFHVIGTQLQAREPDC-----FNSGETIRKL 284

Query: 187 QAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           Q   +K +I  +        +I GD N         D   K        +  P   D++ 
Sbjct: 285 QLNDIKSFIDSKDIPKDETVLITGDLNIIKGSNEYFDMISKLNVNEPRYVGVPFTLDTKT 344

Query: 246 NANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCP 297
           NA           I +DY ++ +   +  + ++ +    +    K          SD  P
Sbjct: 345 NALAAYYYEKEKPIYLDYILVSKLHAQPPVWQNLAYDPISNTTWKRSDGYTSYEFSDRYP 404

Query: 298 IS 299
           + 
Sbjct: 405 VY 406


>gi|254236851|ref|ZP_04930174.1| hypothetical protein PACG_02871 [Pseudomonas aeruginosa C3719]
 gi|126168782|gb|EAZ54293.1| hypothetical protein PACG_02871 [Pseudomonas aeruginosa C3719]
          Length = 379

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/328 (10%), Positives = 93/328 (28%), Gaps = 68/328 (20%)

Query: 21  AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+ +     + +       +R T++        + +  ++   D+V 
Sbjct: 70  GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129

Query: 71  LQEMGSYNAVAK-------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           LQE+   ++                     +   +      +       +     A   R
Sbjct: 130 LQEIDDGSSATDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQATLSR 189

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175
            +     ++  P           G R A+ +       G ++ VL+          +  +
Sbjct: 190 YRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLN----------ARFD 239

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------- 222
               +   L +Q +  +  + + +    P+++ GD N                       
Sbjct: 240 RPQANDDTLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYLLAPLRAPYREDSE 299

Query: 223 --------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                       +++    + +         +          +DY     +         
Sbjct: 300 LGILSGRFPMVPSLEEASGVDQVRWYTHFPNDPRV-QGPDRTLDYLFHSPSL-------- 350

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +    +S   ++S+H P++  +
Sbjct: 351 ---TRLDARVRRSDTLQISNHLPLAARF 375


>gi|298376437|ref|ZP_06986392.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298266315|gb|EFI07973.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 628

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 92/310 (29%), Gaps = 66/310 (21%)

Query: 1   MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M + ++ A+V    +P   ++AQ         +R++S+NI      + V+          
Sbjct: 10  MRKWFIWAIVMIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 59

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D   + +  + +  D+V +QE+ S    +            +      ++     +   
Sbjct: 60  -DLGRIAEAIRKVAPDVVAVQEVDSVTGRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 117

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K   V  +   L G      R   R  + +  E    +      HL       
Sbjct: 118 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 164

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                   S  +L ++A            +  P  IAGD+N   +       F   I  +
Sbjct: 165 ---EDRMLSLPILRREAA----------SAHKPLFIAGDWNATAHSP-----FITEISKD 206

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L+  PK+                +DY        +   + S                 
Sbjct: 207 FQLLSNPKQA-----TFPAFTPDSCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 252

Query: 292 LSDHCPISID 301
            SDH P+  +
Sbjct: 253 ASDHRPVVTE 262


>gi|149914506|ref|ZP_01903036.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b]
 gi|149811299|gb|EDM71134.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b]
          Length = 262

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 69/305 (22%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L +WNIN++  +EG+                + +  +    DI+ LQE  S       
Sbjct: 3   FTLATWNINSVRLREGL----------------VARLLREEAPDILCLQECKSPVDK--- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S   L            +  +A+  K                +       
Sbjct: 44  ------IPAESFAALGYPYMVARGQKGYNGVAILSKLPIEDAGDMDFAALGHARH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V   +E       V+  +       D  +   +            ++DW    +    
Sbjct: 93  --VAGRLENG-----VVIHNFYVPAGGDIPDREKNEKFGQKLDYLTEMRDWFRDGRPQKA 145

Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCNAN 248
             ++ GD N         ++    K +                   +   +         
Sbjct: 146 --ILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVAHLGDVQEAGGWVDVTRSDIPEGQLY 203

Query: 249 KNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+     +                        ++ SDH P+
Sbjct: 204 SWWSYRAKDWDAADKGRRLDHVWASADLRHAFHSS-------RVLRAARGWEQPSDHAPV 256

Query: 299 SIDYD 303
              +D
Sbjct: 257 FATFD 261


>gi|25029135|ref|NP_739189.1| putative exodeoxyribonuclease III [Corynebacterium efficiens
           YS-314]
 gi|259505870|ref|ZP_05748772.1| exodeoxyribonuclease III [Corynebacterium efficiens YS-314]
 gi|23494422|dbj|BAC19389.1| putative exodeoxyribonuclease III [Corynebacterium efficiens
           YS-314]
 gi|259166544|gb|EEW51098.1| exodeoxyribonuclease III [Corynebacterium efficiens YS-314]
          Length = 261

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 75/301 (24%), Gaps = 62/301 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+V+WN+N                   +    +  +    D D++ +QE    +     
Sbjct: 1   MRIVNWNVN----------------SARTRVDRMVDFLIRHDVDVLAVQETKCRDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y   R I +            +A+  +      Q+               +
Sbjct: 41  ------QFPYERFREIGYEVAHFGLSQWNGVAIISRVGIEDVQTSFPGQPGFDKDPGAEQ 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKES 201
                 +      + V  +++ +   +      Y        +    L++ +    +   
Sbjct: 95  AIEARAIGAGCGGVRVWSLYVPNGREIADPHYDYK------LRWLFALRNHVADVLRANP 148

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GDFN                           ++ +         P        
Sbjct: 149 EEKMILLGDFNIAPTDQDVWDISAFEGHTHVTEPERAAFQQLIEAGLTETSPGPGTFTYW 208

Query: 247 ANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             K  R      + ID+ +                     D  +  GK  SDH P+ +DY
Sbjct: 209 DYKGARFLKGEGMRIDFQLATPALTADHTF---------VDVEERGGKGASDHAPVIVDY 259

Query: 303 D 303
            
Sbjct: 260 S 260


>gi|313109395|ref|ZP_07795356.1| putative nuclease or phosphatase [Pseudomonas aeruginosa 39016]
 gi|310881858|gb|EFQ40452.1| putative nuclease or phosphatase [Pseudomonas aeruginosa 39016]
          Length = 379

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/328 (10%), Positives = 93/328 (28%), Gaps = 68/328 (20%)

Query: 21  AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+ +     + +       +R T++        + +  ++   D+V 
Sbjct: 70  GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129

Query: 71  LQEMGSYNAVAK-------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           LQE+   ++                     +   +      +       +     A   R
Sbjct: 130 LQEIDDGSSATDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQATLSR 189

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175
            +     ++  P           G R A+ +       G ++ VL+          +  +
Sbjct: 190 YRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLN----------ARFD 239

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------- 222
               +   L +Q +  +  + + +    P+++ GD N                       
Sbjct: 240 RPQANDDTLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYLLAPLRAPYREDSE 299

Query: 223 --------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                       +++    + +         +          +DY     +         
Sbjct: 300 LAVLSGRFPMVPSLEEASGVDQVRWYTHFPNDPRV-QGPDRTLDYLFHSPSL-------- 350

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +    +S   ++S+H P++  +
Sbjct: 351 ---TRLDARVRRSDTLQISNHLPLAARF 375


>gi|251790113|ref|YP_003004834.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591]
 gi|247538734|gb|ACT07355.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591]
          Length = 256

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 81/293 (27%), Gaps = 49/293 (16%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              S+     +++ N +             S          LR+  +++ AD+V LQE+ 
Sbjct: 5   SQPSLGFSFTVLTINTH----------KGFSALNRRFILPELREAVRSVSADVVCLQEVL 54

Query: 76  SYNAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYP 129
             ++   +    +P      F +     +++        +     AV         ++  
Sbjct: 55  GRHSTHPLQVEHWPDTPHYEFLAETMWNDYAYGRNAVYPEGEHGNAVLSHFPIFSYRNLD 114

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +     S S    R  +  ++++  + + +  + +                 S   QQ  
Sbjct: 115 V-----SVSDKARRGILHCVLKVPNRDLHIHVVCVHMGLT-----------ASHRRQQLA 158

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L D +     +  P V+AGDFN                        F +          
Sbjct: 159 LLCDLLDT-LPADAPLVVAGDFNDWQM-----KACALLKRRAGLEEVFSQHLGKPARTFP 212

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +D   +                             LSDH P++++ 
Sbjct: 213 ARFPLLRLDRIYVRNAR-----------TSIPRLLPSKPWSHLSDHAPLAVEI 254


>gi|90417808|ref|ZP_01225720.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
 gi|90337480|gb|EAS51131.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
          Length = 276

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 79/303 (26%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NIN ++                    +L ++    + D V LQE+ S +     
Sbjct: 1   MKIASFNINGVNG----------------RLPVLLRWLAEAEPDAVCLQELKSPDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +            +A+  +    L+    L G  D        
Sbjct: 41  ------KFPIDAIREAGYGAIWHGQKSWNGVAILARGTDPLETRRGLPGDDDDHQSRYLE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV        K + +  ++L +       +  Y        +      +       +  
Sbjct: 95  AAV--------KGVLIGCLYLPNGNPAPGPKFDYK------LRWLGRFANHAADLMATGA 140

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDP-----------NDSLIRFPKEKDSRCNANK 249
           P V+AGD+N     L            +             +       +      +   
Sbjct: 141 PVVLAGDYNVIPTELDVYKPEHWVDDALFRPEVREAFHRLLDAGWTDAIRSLHPEASIYT 200

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + +D+ ++       L+       +          ++ SDH P+ I
Sbjct: 201 FWDYLRNAWGRDAGLRLDHLLLSPTLAPRLLAAGVHRDV-------RGWEKASDHAPVWI 253

Query: 301 DYD 303
           +  
Sbjct: 254 EIT 256


>gi|300811911|ref|ZP_07092372.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497108|gb|EFK32169.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 275

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 85/304 (27%), Gaps = 56/304 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWNI++L+     +  +  + R       + +   +LD D++ LQE     +    
Sbjct: 1   MRLISWNIDSLNAALTGTSPRAEMTRG------VLKNLHDLDPDVLALQETKLPASGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +     +  S  +     +       K       + P +GA +     G  
Sbjct: 55  KHQAALADLFPEYDFVWRSSMEPARKGYAGTMFLYKKGLDPLVTRPEIGAPEPMDFEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                      + L        +   
Sbjct: 114 -----ILTLEFPDFYVTQVYTPNAGNGLVRLGDRQEWDKCYRAYLEEL--------DKKK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F +         
Sbjct: 161 PVLASGDFNAAYQEIDLKHPKNNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +           ++   G+R  DHCPI
Sbjct: 221 SWWAQRVRTAKANNSGWRIDYWLVSNRLADQVEKS----------EMIETGERA-DHCPI 269

Query: 299 SIDY 302
            ++ 
Sbjct: 270 LLEI 273


>gi|189466093|ref|ZP_03014878.1| hypothetical protein BACINT_02463 [Bacteroides intestinalis DSM
           17393]
 gi|189434357|gb|EDV03342.1| hypothetical protein BACINT_02463 [Bacteroides intestinalis DSM
           17393]
          Length = 254

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L    G  L                ++ +   AD+V +QE          
Sbjct: 1   MKIITYNVNGLRAAVGKGLP---------------EWLEQEQADVVCIQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +     +     H    +    ++ +A+  K        +   G          R
Sbjct: 38  LQPDQYPEEALSALGYKHYLYSAQKKGYSGVAILTKREP----DHVEYGMGMEEYDNEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   I V+ ++  S    D  +       +      +  ++++T  ++S  
Sbjct: 94  F-----IRADFGDISVVSVYHPSGTSGDERQ-------AFKMVWLEKFQEYVTGLRKSRP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  +D                W T   N   I   +          
Sbjct: 142 KLILCGDYNICHEPIDIHDPIRNATNSGFLPEEREWMTRFLNAGFIDTFRLLHPEQQEYT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++ +      +      +              SDHCP+ +
Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVTE--LVRPLLREARILNDAVH---------SDHCPMLL 250

Query: 301 DYD 303
           D +
Sbjct: 251 DIE 253


>gi|254932552|ref|ZP_05265911.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes
           HPB2262]
 gi|293584109|gb|EFF96141.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes
           HPB2262]
 gi|328476050|gb|EGF46765.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes 220]
 gi|332310743|gb|EGJ23838.1| Endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes str. Scott A]
          Length = 257

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 73/282 (25%), Gaps = 36/282 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K       L +        D + ++E      +  +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKILTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++      +         P + +  S +    R
Sbjct: 54  KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPEVPSIHSTAM-FPR 112

Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             V   +E   +GK+ ++ + HL                       A  L        + 
Sbjct: 113 ICVWGKLEDSTDGKQFYIFNTHLDHIS-------------EEARLFASQLLLHKASLIQE 159

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPID 258
            +P ++ GDFN + +    N    +  D         K      +  + LR       ID
Sbjct: 160 DLPVILLGDFNTEPSTPTYNLITQRYQDAQLLSKTPVKGPLGSFHDFQPLRPESELEKID 219

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Y  +            F    Y     +  G   SDH P+  
Sbjct: 220 YIFVSNE---------FHICSYETSTDEIDGCSASDHFPVMA 252


>gi|169776017|ref|XP_001822475.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           oryzae RIB40]
 gi|83771210|dbj|BAE61342.1| unnamed protein product [Aspergillus oryzae]
          Length = 438

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 87/313 (27%), Gaps = 35/313 (11%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R          V   A+  Q   ++S+N+  L      +         +     +    
Sbjct: 1   MRSIAYLASGLPVALAATSGQ-FDVLSFNVAGLPAILNGNEVPGDKTNNSK---AIGAKF 56

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              D D++ +QE  +Y+A         +            +   +              V
Sbjct: 57  AEYDYDVIHVQEDFNYHA---------YIYETDDHPYRTATSGGAGIGSGLNTLANYPWV 107

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180
              +  +              +    + V  + G  +   ++H  +    D +    +  
Sbjct: 108 DFERVKWETCSDASGSDCLTPKGFTTMRVRFDEGVYVDFYNLHTDAGSETDDVTARSAN- 166

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIR 236
                   Q + D+I     +    ++ GD N +    G N   +       +P   LI 
Sbjct: 167 -------LQQVADYI-GNNSAGNAVLVFGDTNARYTSSGENIRVFGTEQNMTNPWVELIL 218

Query: 237 FPKEKDSRCNAN-----KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              E     +               +D      +     I+ S +   Y     +  G  
Sbjct: 219 NGVEPTEGTDPWMCDNPTTNNTCETVDKIFYRGS---RSIELSATFWSYVGTKFELDGHI 275

Query: 292 LSDHCPISIDYDF 304
           LSDH P++ ++ +
Sbjct: 276 LSDHNPVTSNFTW 288


>gi|21357231|ref|NP_647790.1| CG12034 [Drosophila melanogaster]
 gi|32172461|sp|Q9VZS6|NSMA_DROME RecName: Full=Putative neutral sphingomyelinase
 gi|15291739|gb|AAK93138.1| LD24865p [Drosophila melanogaster]
 gi|23092890|gb|AAF47741.2| CG12034 [Drosophila melanogaster]
 gi|220944946|gb|ACL85016.1| CG12034-PA [synthetic construct]
 gi|220954776|gb|ACL89931.1| CG12034-PA [synthetic construct]
          Length = 442

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 81/284 (28%), Gaps = 35/284 (12%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           NI  +                      + +   +   DIV LQE+ +      +      
Sbjct: 12  NIWGIPYVSSDRRP---------RIDAICKELASGKYDIVSLQEVWAQEDSELLQKG--- 59

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-----LQQSYPLLGAKDSFSRAGNRR 144
                TE ++ HS    +  +   + V  K   +                      G + 
Sbjct: 60  -----TEAVLPHSHYFHSGVMGAGLLVLSKYPILGTLFHAWSVNGYFHRIQHADWFGGKG 114

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + + G+ + + + HL +       +N      +    QA     +I   + +   
Sbjct: 115 VGLCRILVGGQMVHLYNAHLHA-----EYDNANDEYKTHRVIQAFDTAQFIEATRGNSAL 169

Query: 205 FVIAGDFNRKINYLGNNDDFW--KTIDPNDSLIRFPKEKDSRCNANKNLRNKI----PID 258
            ++AGD N +   +      +  K +D  DS      E +     +K  R +      ID
Sbjct: 170 QILAGDLNAQPQDISYKVLLYTSKMLDSCDSDSFRTNECEHNSYTSKQARERNPLGIRID 229

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  +       +  E     L   + +       SDH  +    
Sbjct: 230 HIFVRGG--DHVNAEIAEYKLPFPERVPGEKFSFSDHEAVMAKL 271


>gi|317126375|ref|YP_004100487.1| exodeoxyribonuclease III [Intrasporangium calvum DSM 43043]
 gi|315590463|gb|ADU49760.1| Exodeoxyribonuclease III [Intrasporangium calvum DSM 43043]
          Length = 263

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/306 (10%), Positives = 73/306 (23%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   S    +  +    D D++ LQE  +       
Sbjct: 1   MRIATWNVN----------------SIRSRVDRVTDWLVRSDVDVLALQETKARED---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   R + +            +A+  +      +    +G           
Sbjct: 41  ------QFPHDRFRELGYEVAHHGLSQWNGVAIVSRVGIEDVR----VGFDGMPGWGDPA 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
            A    +      + +  +++ +   L+     Y             L D          
Sbjct: 91  AAEARAIGALCGGVRIWSLYIPNGRTLEDPHLLYKLD------WLAALADAGRSWLADDP 144

Query: 203 -VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P  + GD+N                  +        ++ +          +       
Sbjct: 145 SAPIALLGDWNIAPFDEDVWSVPFYEGRTHTSPRERAAFQAVVDAGFADVV-RPHCPGPG 203

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            + ID+ +      + +   +        D    +GK  SDH P
Sbjct: 204 VYTYWDYVQLRFQKGRGMRIDFALCSPALARRVTGAAI-------DREARKGKGASDHAP 256

Query: 298 ISIDYD 303
           +  + +
Sbjct: 257 VVFEIE 262


>gi|282880228|ref|ZP_06288945.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281305888|gb|EFA97931.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 316

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/315 (9%), Positives = 86/315 (27%), Gaps = 46/315 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD------- 65
             +V  N   L + +  SL  +           +  R  +    + Q   +         
Sbjct: 12  FTVVELNCENLFDCQHDSLKHDEQFLPTSDYHWTPHRYWTKVNRIGQTILSCGESANGWS 71

Query: 66  -ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
             D+V L E+ + + +  +  ++             +    S ++    +A+        
Sbjct: 72  LPDMVGLCEVENDSCLVALTRRS-----LLRHARYEYVMTHSPDERGIDVALLYSPFSFQ 126

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              +  +           R  +     I  G  + V  +H  S    +    ++      
Sbjct: 127 LLDWRAIPIHPVKDMRPTRDVLYARGRIVTGDTLHVFVVHAPSRMGGEPFTRSHRRIVGD 186

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +  QA      ++ +       ++ GDFN   +           +    +  +      +
Sbjct: 187 ILLQAIDSIQSVSTRPR----ILVMGDFNDYSSDKNILRLVQSGLVEVSANAKGTHGAKA 242

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------------NEDDIKSRG 289
                +       +D+  +D+++   + +    +  +                       
Sbjct: 243 ---TYRFRGEWGSLDHIFLDKSSAALVQECYVHDAPFLLEKDEKYGGVKPRRNYQGPRYL 299

Query: 290 KRLSDHCPISIDYDF 304
              SDH P+ +  ++
Sbjct: 300 NGFSDHLPLVMRINW 314


>gi|227893773|ref|ZP_04011578.1| exodeoxyribonuclease III [Lactobacillus ultunensis DSM 16047]
 gi|227864418|gb|EEJ71839.1| exodeoxyribonuclease III [Lactobacillus ultunensis DSM 16047]
          Length = 275

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 81/303 (26%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++L+     +  +    R       +       + DI+ +QE            
Sbjct: 3   LISWNIDSLNAALTGTSSRAGETR------EVLDKIHAANPDIIAIQETKLRAIGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +      +     +  S  +     +       K     + SYP++GA       G    
Sbjct: 57  QAVLAEKFPEYNYVWRSSEEPARKGYAGTMYLYKKELTPKASYPVIGAPAPMDSEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +   K +V  ++  +                      + L        +   P 
Sbjct: 114 ---MITLEFDKFFVTQVYTPNSGNGLRRLADRQVWDQKYVDYLEAL--------DKQKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GDFN                           +  +        F K   +  +    
Sbjct: 163 LASGDFNCAHTEIDLKHPENNHHSAGFTDEERADFTNLLNGGFTDTFRKIHGNITDVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++       +++    +                DHCPI +
Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHCPILL 271

Query: 301 DYD 303
           + +
Sbjct: 272 EIN 274


>gi|182412293|ref|YP_001817359.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
 gi|177839507|gb|ACB73759.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
          Length = 257

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 82/295 (27%), Gaps = 53/295 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV 80
           +  RL+ +N+       G    + +               +  DAD++ LQE+       
Sbjct: 2   KTFRLLQFNMQF-----GQGWDEAAPDAAPIRIEQTIAEIRRHDADVIMLQEVEHALPEG 56

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKD 135
            +V P   +     T R  +        D         +A+  +     ++   L     
Sbjct: 57  RQVEPAPNYTRLRETLRDYDSWFAYPKADPRELPFGIGLAIFSRTPLRERRKIDLPSPPV 116

Query: 136 SFSRAGN------RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            F   G       R  +     + G+++ + + HL +F  L +    +      +  +  
Sbjct: 117 EFEFEGRRTTPTDRAMIGAKTTLLGREVQLFNTHLLAFFMLHTSSARHPEQRRRVVAELA 176

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                         P +++GDFN        +D       P         +         
Sbjct: 177 A----------CEGPTLLSGDFNVSG-----HDALIAQFAPAGFSTVQRTKT-------T 214

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             R    +D+   +          S +                SDH  +  D++F
Sbjct: 215 WRRRPYILDHIFYNAPLRAVQHAVSPTL--------------ASDHHALVADFEF 255


>gi|170721841|ref|YP_001749529.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619]
 gi|169759844|gb|ACA73160.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619]
          Length = 260

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 78/304 (25%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R+ ++NIN +                      L  + +    D+  LQE+ + +   
Sbjct: 2   KPLRIATFNINGIGS----------------RLPALLAWLEREKPDVACLQELKAADT-- 43

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                              +            +A+  ++ + L+    L G +D      
Sbjct: 44  --------KFPREAIEAAGYGCLYMGQPSWNGVAILARDSQPLEVRRGLPGMEDDSQSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV        + + V  ++L +       +  Y        +  + L         S
Sbjct: 96  LEAAV--------QGVLVGCLYLPNGNPQPGPKFEYK------LRWFECLVKHAHDLLGS 141

Query: 202 LVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCN 246
             P V+AGDFN         +                 ++ +          +       
Sbjct: 142 GHPTVLAGDFNVVPTDFDIYNPKSWLKDALLQPESRNCYQALLEQGWTDAIRQLYPDERI 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ ++  +    L            D       + SDH P 
Sbjct: 202 YTFWDYFRNHWARNAGLRIDHLLLSPDIASHLKAGGV-------DAWVRNEPKPSDHAPA 254

Query: 299 SIDY 302
            I+ 
Sbjct: 255 WIEL 258


>gi|309775417|ref|ZP_07670420.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916806|gb|EFP62543.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 3_1_53]
          Length = 254

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 79/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RLVSWN+N +                         +   +DADI  +QE          
Sbjct: 1   MRLVSWNVNGIRACMQKGFM---------------DFFNEIDADIFCIQETKMQPG-QLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  + ++     +          +   V  K   +       +   D   R    
Sbjct: 45  IETPLYHQYMNSAEKKGY----------SGTMVFSKQEPIHVSYGLGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  +++ ++  +        +               L +          
Sbjct: 91  -----VITCEYEDFYLVCVYTPNSKDGLLRLDYRMEWEDAFRTYLHKLNE--------TK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                         +    +  +  +  +      +    
Sbjct: 138 SVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERNKMSVLLDSGFIDSYRYLYPEQEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++A   + +      +Y            SDHCP+S
Sbjct: 198 SWWSYRFKAREKNAGWRIDYFLVSEDAKDGIREAKIHTDIY-----------GSDHCPVS 246

Query: 300 IDYD 303
           ++++
Sbjct: 247 LEFE 250


>gi|282878661|ref|ZP_06287430.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281299206|gb|EFA91606.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 248

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 69/262 (26%), Gaps = 29/262 (11%)

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
           +   + ++   L++   +  + DI   QE   +  V     +     +    R       
Sbjct: 6   DGANQWSNRKELVKSLIRFHEFDIFGTQEGFKHMLVQ--IAELKQYAWIGEGRDGGDEGE 63

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDI 162
            S             +        P        +   NR         +I+GK  ++ + 
Sbjct: 64  HSAIFYRKDRFDLLDSGNFWYSETPEKVGLGWDATCCNRICSWGKFREKISGKIFFLFNS 123

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           H     F          S       A+ L   I     +    +  GDFN          
Sbjct: 124 H-----FDHQGVIARRES-------ARLLLQKIKSIAGTNATVISTGDFNATPESEPIRI 171

Query: 223 DFWK--TIDPNDSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEI 278
                  +D     I+ P       N  K         ID+  + ++          S  
Sbjct: 172 LLNDGLLLDSYKISIQPPYGTYGTSNGWKIREKGKDQRIDHIFVTKD---------VSIQ 222

Query: 279 LYNEDDIKSRGKRLSDHCPISI 300
            Y   +    G+  SDH P+ +
Sbjct: 223 KYGVINDIPYGQFPSDHYPVMV 244


>gi|237717228|ref|ZP_04547709.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|237718983|ref|ZP_04549464.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|262405995|ref|ZP_06082545.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294647971|ref|ZP_06725522.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294806915|ref|ZP_06765740.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|298480085|ref|ZP_06998284.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
 gi|229443211|gb|EEO49002.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229451761|gb|EEO57552.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|262356870|gb|EEZ05960.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292636687|gb|EFF55154.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294445944|gb|EFG14586.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|298273894|gb|EFI15456.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
          Length = 361

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 67/305 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+ + +  E                  +  Y  + +ADI+ LQE  +     
Sbjct: 99  GSIKILSYNVMSFNNLEKKDGKNP-----------VLSYLVDSNADIICLQEYNTATNKK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  ++      +      H +          +A   K   +           +   +  
Sbjct: 148 YLTEQDIKKALKAYPYQSVHQQG----KGDVQLACFSKFPILSIHPIKYESNYNGSMKY- 202

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
                  ++ +N   + +++ HL+S          Y                        
Sbjct: 203 -------VLNVNNDTLTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLA 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ + QA  +   I   K      ++ GDFN   +    +    + +D       F 
Sbjct: 256 EASAIRASQADSVAKAIAACKYPTT--IVCGDFNDG-SISYTHRILTQKLDD-----AFT 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  N   +             +    R  + SDH PI
Sbjct: 308 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 354

Query: 299 SIDYD 303
                
Sbjct: 355 WCYIS 359


>gi|116051998|ref|YP_789159.1| hypothetical protein PA14_12670 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254242644|ref|ZP_04935966.1| hypothetical protein PA2G_03405 [Pseudomonas aeruginosa 2192]
 gi|296387516|ref|ZP_06876991.1| hypothetical protein PaerPAb_05157 [Pseudomonas aeruginosa PAb1]
 gi|115587219|gb|ABJ13234.1| possible nuclease or phosphatase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126196022|gb|EAZ60085.1| hypothetical protein PA2G_03405 [Pseudomonas aeruginosa 2192]
          Length = 379

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/328 (10%), Positives = 93/328 (28%), Gaps = 68/328 (20%)

Query: 21  AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+ +     + +       +R T++        + +  ++   D+V 
Sbjct: 70  GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129

Query: 71  LQEMGSYNAVAK-------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           LQE+   ++                     +   +      +       +     A   R
Sbjct: 130 LQEIDDGSSATDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQATLSR 189

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175
            +     ++  P           G R A+ +       G ++ VL+          +  +
Sbjct: 190 YRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLN----------ARFD 239

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------- 222
               +   L +Q +  +  + + +    P+++ GD N                       
Sbjct: 240 RPQANDDTLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYLLAPLRAPYREDSE 299

Query: 223 --------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                       +++    + +         +          +DY     +         
Sbjct: 300 LAVLSGRFPMVPSLEEASGVDQVRWYTHFPNDPRV-QGPDRTLDYLFHSPSL-------- 350

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +    +S   ++S+H P++  +
Sbjct: 351 ---TRLDARVRRSDTLQISNHLPLAARF 375


>gi|171912039|ref|ZP_02927509.1| hypothetical protein VspiD_12705 [Verrucomicrobium spinosum DSM
           4136]
          Length = 339

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 100/332 (30%), Gaps = 45/332 (13%)

Query: 1   MIR-----KYVLALVFFLVPCTASVA-------------QKVRLVS---WNINTLSEQEG 39
           M R     ++ LA  +  +  T ++              ++ R+V+   +N+    +   
Sbjct: 1   MKRFLFGSQWFLASAWLWLFATTTLPVYSQAESTSAGFDERNRIVTFCAYNLRNYLKMPR 60

Query: 40  --VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
                 +    +   +   L +    +  DI+ + E+G    +A +            + 
Sbjct: 61  SVDGAIQEKALKPDKEIAPLIEILATIKPDILGVCEIGDAEDLADL-----QARLKVRDI 115

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR-AGNRRAVELLVEI-NGK 155
            + HS+  +  D    +A+  +     + S   L            R  ++  V +    
Sbjct: 116 DLPHSEMGNGGDPTRRLALLSRFPITSRNSQSELKYHIGDVILPMQRGILDATVALRPNF 175

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNR 213
           ++  L +H KS   +  ++        +   +A  L+  I      E     +  GDFN 
Sbjct: 176 EVRFLGVHFKSQREVPGMDQKL-----MRRNEAHLLRRHIESILTTEPATRLLAYGDFNE 230

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLI 271
             +     +           +    ++       +      +   +DY  +++     + 
Sbjct: 231 SKHEAALVEIEGVPGTDVSMMDVRLRDSRGETWTHFWDAADHYSRLDYCFVNRALQSDIK 290

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    +           SDH P+ I  D
Sbjct: 291 ------KPESFVYDPPNFYDASDHRPLVIKID 316


>gi|189520528|ref|XP_001338369.2| PREDICTED: sphingomyelin phosphodiesterase 2-like [Danio rerio]
          Length = 436

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 88/307 (28%), Gaps = 46/307 (14%)

Query: 17  TASVAQKVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           T S   K R++S N   I  LS            K+    + L+ +     + D+  LQE
Sbjct: 2   TTSEPIKFRVLSLNCWGIQYLS------------KKRQERFVLIGELLNQEELDVALLQE 49

Query: 74  MGSYNAV----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           +           K+        ++ +    +     S + IH A   R            
Sbjct: 50  VWCEKDFLYLKKKLSTVYPHSHYFKSGFFGSGLAVFSRHQIHDAFLYRYSL-------NG 102

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      G +   ++L+ I+G K+ V   HL +               S    QA 
Sbjct: 103 YPYMAQHGDWFGGKAVGKVLLNISGLKVHVFVTHLHA-----EYCREKDSYLSHRVVQAW 157

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L+ +I          ++ GD N   + LG       T   +        +       + 
Sbjct: 158 ELQQFIRHTSAGADVVILGGDLNMHPDDLGTRLLRNYTGLQDSFTEAATFDGCEGGLTHI 217

Query: 250 N------------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           +                I IDY +   +    +  ES S                SDH  
Sbjct: 218 SENPFTLADGLAPFGGGIRIDYIMFKGSGEVDVSCESLSTTKGPVPGQP---FPYSDHEA 274

Query: 298 ISIDYDF 304
           ++  + F
Sbjct: 275 LTAQFLF 281


>gi|33597251|ref|NP_884894.1| hypothetical protein BPP2674 [Bordetella parapertussis 12822]
 gi|33573678|emb|CAE37967.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 252

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 48/292 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74
                ++R+++ N +                        LR+  +    D+V LQE+   
Sbjct: 2   PPEPIRLRILTVNAHKGFTSFNRRF----------ILHELREALREARPDLVLLQEVLGE 51

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131
              + A    +P  +   F +      ++        D H   AV  K   V  ++  L 
Sbjct: 52  HQRHAARHARWPAVSQYEFLADTLWSAYAYGRNAVYPDGHHGNAVLSKYPIVSHRNEDLS 111

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                      R  +  ++++      +  + +                 +   +Q + L
Sbjct: 112 VGA----AHEPRGMLHCVLDVRDAPAPLHALCVHLGLR-----------EAHRQEQLRRL 156

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             ++ Q   +    ++AGDFN              T+                       
Sbjct: 157 CQYLRQHVPAQAAALLAGDFNDWRQRAD------ATLARCGLADVHRLALGHAARTFPAA 210

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              + +D   +   A     + S           +    RLSDH P++ +  
Sbjct: 211 CPLLRLDRIYVRNVAGSEPRRLS-----------RRPWSRLSDHVPLAAEVT 251


>gi|322696797|gb|EFY88584.1| DNA lyase [Metarhizium acridum CQMa 102]
          Length = 634

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/340 (14%), Positives = 86/340 (25%), Gaps = 83/340 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
            R+ +WN+N +    G   W     R    +  +    ++   DIV +QE  +   +   
Sbjct: 3   FRITTWNVNGIRNPFGYQPW-----REQRTFQAMFDILES---DIVVMQETKIQRKDLQD 54

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN------------VRVLQQSYP 129
            +     W +F+S   L  H K  S   I+T  A                  +   +   
Sbjct: 55  DMVLVPGWDVFFS---LPKHKKGYSGVAIYTRNASCAPIRAEEGITGVLCPPKSTTKFRD 111

Query: 130 LLGAKDSFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           L   +              VE  V  +  +  +L+        +    N         + 
Sbjct: 112 LPSDQQIGGYPRPGQLSGIVEDTVLDSEGRCVILEFPAFVLLGVYCPANRDESRVEFRTS 171

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN----------------------RKINYLGNNDDF 224
             + L   I          ++AGD N                       +   L     F
Sbjct: 172 FFEALAARIRNLVAEGKEVILAGDLNVIRSEMDSTNVMENLRKENMTIDEWISLPTRRIF 231

Query: 225 WKTIDPNDSLIRFPKEKDSR------------------CNANKNLRNK----IPIDYFVM 262
            + I     +    + +++                   C   K           IDY + 
Sbjct: 232 NQLIFEGSIVGDRDEGRETPVLWDLCRCFHPSRLGMNTCWDTKKNTRPANNGSRIDYILC 291

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +    +              G   SDHCP+    
Sbjct: 292 SNGIKDWFTSANIQ-----------EGLMGSDHCPVFATI 320


>gi|293605431|ref|ZP_06687813.1| endonuclease/exonuclease/phosphatase [Achromobacter piechaudii ATCC
           43553]
 gi|292816159|gb|EFF75258.1| endonuclease/exonuclease/phosphatase [Achromobacter piechaudii ATCC
           43553]
          Length = 255

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 84/287 (29%), Gaps = 53/287 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           + +++ N +                        LR+  +    D+VFLQE+   + V   
Sbjct: 12  LTVLTVNTHKGFTSFNRRFM----------LHDLREALRLAAPDVVFLQEVLGEHQVHAE 61

Query: 81  --AKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              + +P  +   F +     +++          H   A+  +      +++ +      
Sbjct: 62  RHQEAWPALSQYEFLADTLWSDYAYGRNAVYPAGHHGNAILSRYPIERYENHDVSVDGH- 120

Query: 137 FSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 R  +  ++ + G   +  + +HL                     +Q Q L + +
Sbjct: 121 ----EGRGLLHCVLRMPGDAPVHAICVHLGLL-------------ERHRGEQLQRLCELV 163

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            ++  +  P +IAGDFN             + +    +   F                 +
Sbjct: 164 AREVPADEPLLIAGDFNDWRLNAD------RLMAGCGTQEVFTTRLGRPARTFPARWPLL 217

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D   +        +  +                RLSDH P+S + 
Sbjct: 218 RLDRIYVRSVRDWRPVPLASRV-----------WSRLSDHVPLSAEI 253


>gi|294083994|ref|YP_003550751.1| exodeoxyribonuclease III [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663566|gb|ADE38667.1| exodeoxyribonuclease III [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 256

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 81/302 (26%), Gaps = 71/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ SWN+N                   +    +  + K  +ADI+ +QE+ S +     
Sbjct: 1   MRIASWNVN----------------SAKARLDHITGWLKADNADILMMQEIKSQDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     +           +  +A+  +       +       D  +R    
Sbjct: 41  ------NFPHDAFTDLGWHIAVHGQKSYNGVAIASRFPIDDVMNGLPGDDADEQARY--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + + +I+L +       +  Y  S          L D   +   + +
Sbjct: 92  ------IEATINGVRIGNIYLPNGNPAPGPKFDYKLS------WMARLYDRAVELLATEM 139

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNANK 249
           P V+ GD+N     +   D        +  +D             +   +          
Sbjct: 140 PVVLGGDYNVLPQDVDCYDPAAWVGDALTHDDSRAAFFKILHAGYMDALRALHPSGVHYT 199

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID+ ++   A   L            D      ++ SDH PI  
Sbjct: 200 YWDYQAGAWQRDNGLRIDHLLLSPEAGDRLTDVGI-------DRAPRGLEKPSDHTPIWC 252

Query: 301 DY 302
             
Sbjct: 253 QL 254


>gi|302895743|ref|XP_003046752.1| hypothetical protein NECHADRAFT_66713 [Nectria haematococca mpVI
           77-13-4]
 gi|256727679|gb|EEU41039.1| hypothetical protein NECHADRAFT_66713 [Nectria haematococca mpVI
           77-13-4]
          Length = 602

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 92/329 (27%), Gaps = 62/329 (18%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +   +    + + +  +N   L+                     +    +    D++FLQ
Sbjct: 284 VSFTSKGSCKGISVADYNTENLNP---------QSTHLPLVIEQIVNKLRT--PDLIFLQ 332

Query: 73  EMGSYNA------------VAKVFPKNTW-----CIFYSTERLINHSKRDSNNDIHTAIA 115
           E+   +             +A +             +   + + N        +I TA  
Sbjct: 333 EVQDNSGATNDGVVSANLTLAALADGIEASSGIEYAWTEVDPVNNKDGGQPGGNIRTAYL 392

Query: 116 VRKKNVRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELL---VEING 154
            R   + +++                  +  P      + +   +R+ +  +   V+   
Sbjct: 393 YRPDVIELVKPSAGASDAANEVLDGPSLKYNPGRIDPANAAWDDSRKPLVAMWKPVKGTK 452

Query: 155 KKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLV--PFVIA 208
           K  + +++H  S     S+               +QQAQ   D+I Q  +       + A
Sbjct: 453 KPFFTVNVHFGSKGGSTSIHGDPRSPVNKGVEKRTQQAQVTADFIAQILKKDRKAHIIAA 512

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GDFN            +        L    K  ++         N   +D+  + +    
Sbjct: 513 GDFNEFTQVAPIR--TFVEESGLVDLDDAAKVPETERYTYLFDSNCQALDHMFISKELR- 569

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                       + +  + +   +SDH P
Sbjct: 570 ----YGVKYEHLHINTWQDKAGEVSDHDP 594


>gi|329946194|ref|ZP_08293807.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328527792|gb|EGF54783.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 269

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 85/309 (27%), Gaps = 69/309 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  + +  D D + +QE+         
Sbjct: 1   MRLATWNVN----------------SIRTRVDRVLAFLEREDVDALAMQEIKCRPD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +A+  +   +   +    G     +++   
Sbjct: 41  ------QFPVEPFEAAGYRLAIHGLNQWNGVAIASRVG-LDDVATSFPGQPGWAAKSEAE 93

Query: 144 RAVELLVE-------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             VE              + + +  +++ +   L     TY           + L+D + 
Sbjct: 94  PVVEARALGATVGAASEARPVRLWSLYVPNGRELTHPHYTYKLD------WLRALRDDVA 147

Query: 197 QK--KESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFP 238
                E  +P  + GD+N                         + F    +     +   
Sbjct: 148 TWLRAEPDLPLALVGDWNVAPKDEDVWDMSVFEGATHVSAPEREAFAAFAETGMHEVTRE 207

Query: 239 KEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +  +      + LR      + ID+    Q     +   +        D  + +GK  SD
Sbjct: 208 RVTNYTYWDYQKLRFPRNEGMRIDFVYASQALADRVTGAAI-------DRNERKGKGASD 260

Query: 295 HCPISIDYD 303
           H P+ ++ D
Sbjct: 261 HVPVIVEVD 269


>gi|312882308|ref|ZP_07742052.1| hypothetical protein VIBC2010_09642 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370021|gb|EFP97529.1| hypothetical protein VIBC2010_09642 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 456

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 90/300 (30%), Gaps = 34/300 (11%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           VP     +  + + ++N+  +         + ++   +               D++ LQE
Sbjct: 176 VPMPEERSNAISVGTYNLWMIPAVSSDITERANLMEHSL-----------SGYDVLALQE 224

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             + +    +F   +           +    DS       +    +   +   +      
Sbjct: 225 AFA-SDRDALFDSLSREY----PYKTDVVGGDSMAMYDGGVVTLSRYPILETDAIIFNHC 279

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             +   A  +  V   ++ NG+   + + HL SF   ++          L +        
Sbjct: 280 SGTDCHAD-KGIVYTKIDKNGQIYNIFNTHLASFSTPEAKRLRRLQLGLLRTF------- 331

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            +T++  S    + AGDFN   N               D    +   +++  +   N   
Sbjct: 332 MLTKQIPSNEVVIFAGDFNIDKNSDFLEYLLMLATLEVDP-PAYDGHREATFDPTINRYA 390

Query: 254 K---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +           +DY ++     +     +  ++             LSDH  ++ +++F
Sbjct: 391 RANYSGGETVEYLDYVLVSSEHLRARKNINTVQLKQRVSYATWDDWHLSDHFAVNGEFEF 450


>gi|148223007|ref|NP_001081376.1| DNase I [Xenopus laevis]
 gi|6683039|dbj|BAA89002.1| DNase I [Xenopus laevis]
          Length = 350

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 90/301 (29%), Gaps = 29/301 (9%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
             ++  +  C        ++ S+NI   S                    LL +     + 
Sbjct: 3   FLVLVPMTACFLQAGFAFKIASFNIQRFSMT---------KVDDPVVLELLMRILSRYE- 52

Query: 67  DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            I+ ++E+      A+  +  + +     +   LI+     S+     A   R+  V+  
Sbjct: 53  -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYVYREDIVKPT 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +  +   G ++  + +  R             +  +           S +       +L 
Sbjct: 112 EWYHFDDGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAIMEVDALY 167

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                  +         +   +I GD+N   +Y+ +       +   + L+    +K+  
Sbjct: 168 DAWVDAKQRL------KMENILILGDYNAACSYVASRHWPIIRLRHVEELVWLIGDKEDT 221

Query: 245 CNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301
             +          D  V       + ++ ++     Y+     +    K +SDH P+ ++
Sbjct: 222 TVSTNTN---CAYDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTYEMAKAVSDHYPVEVE 278

Query: 302 Y 302
            
Sbjct: 279 L 279


>gi|258573831|ref|XP_002541097.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237901363|gb|EEP75764.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 687

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/367 (9%), Positives = 89/367 (24%), Gaps = 81/367 (22%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
               +   K  + ++N   +  +  +      +          LL    +  +ADIV LQ
Sbjct: 303 SANGASDNKFTVFTYNTLCDKYATNQQYGYVPSKALAWEFRQDLLLNEIRGHNADIVCLQ 362

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLIN-----HSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           E+   +       +  +  +               +     D         K + + +  
Sbjct: 363 EIDQKSFHGYFREQLAYNDYKGVYWPKGRAQGMPEEEAKYVDGCATFFKGSKYILLEKSM 422

Query: 128 YPLL----------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSL 173
                         G  D ++R   +  + ++V     + G++  V+++H+       + 
Sbjct: 423 IHFGQTAVRRPDAKGQDDIYNRLWQKDNIAVVVFLENRLTGERFIVVNVHIHW---DPAY 479

Query: 174 ENTYSPSCSLLSQQAQWLKD------------------------------------WITQ 197
           ++      +++ ++   L +                                     +  
Sbjct: 480 KDVKLIQVAIMMEEVTKLAEQYTKIPPCADKTAFRFSEPEDGKENQEASTPVEPAPSVEY 539

Query: 198 KKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
              S +P ++ GDFN                           +  +        F  +  
Sbjct: 540 TSASQIPILVCGDFNSCPGSAVYNLLAHGRLAEEHPDLEKRLYGNLSRMGMTHPFTLKSA 599

Query: 243 SR-----CNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                     N        IDY     N      +     +               SDH 
Sbjct: 600 YGAVGELAFTNYTPEYIDVIDYIWYSSNCLQVTALLGEVEKEYLKRVPGFPNYHFPSDHI 659

Query: 297 PISIDYD 303
            +  ++ 
Sbjct: 660 ALMAEFS 666


>gi|158298437|ref|XP_318609.4| AGAP009587-PA [Anopheles gambiae str. PEST]
 gi|157013880|gb|EAA14571.4| AGAP009587-PA [Anopheles gambiae str. PEST]
          Length = 606

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 75/301 (24%), Gaps = 76/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++ SWN+  L    G                   ++ ++   DI+ +QE          
Sbjct: 354 FKISSWNVAGLRSWVGKGG---------------LEFIEHEKPDILCVQETKCTED---- 394

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      H         H  +A+  K +      +   G  D       R
Sbjct: 395 -----QMPDEARHIKGYHPYWLCKPGGHAGVAIYSKKMPF----HVAYGLGDEEQDQDGR 445

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +    +K +++ +++ +                   Q  + L        ++  
Sbjct: 446 L-----LTAEYEKFYLVCVYVPNAGRKLVTLPKRLRWNEKFHQYLRDL--------DAKK 492

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +     +  F K    R  A 
Sbjct: 493 PVILCGDMNVAHEEIDLANPKTNKKNAGFTPEEREGMTELLSYGFVDTFRKLYPDRTGAY 552

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            +DYF+  +     +        ++            SDHCP++
Sbjct: 553 TFWTYMGGARAKNVGWRLDYFITSERLAGKVTDNVIRSQVF-----------GSDHCPVT 601

Query: 300 I 300
           +
Sbjct: 602 L 602


>gi|15599153|ref|NP_252647.1| hypothetical protein PA3958 [Pseudomonas aeruginosa PAO1]
 gi|107103475|ref|ZP_01367393.1| hypothetical protein PaerPA_01004545 [Pseudomonas aeruginosa PACS2]
 gi|218889759|ref|YP_002438623.1| putative nuclease or phosphatase [Pseudomonas aeruginosa LESB58]
 gi|9950146|gb|AAG07345.1|AE004813_12 hypothetical protein PA3958 [Pseudomonas aeruginosa PAO1]
 gi|218769982|emb|CAW25744.1| possible nuclease or phosphatase [Pseudomonas aeruginosa LESB58]
          Length = 379

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/328 (10%), Positives = 93/328 (28%), Gaps = 68/328 (20%)

Query: 21  AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+ +     + +       +R T++        + +  ++   D+V 
Sbjct: 70  GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129

Query: 71  LQEMGSYNAVAK-------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           LQE+   ++                     +   +      +       +     A   R
Sbjct: 130 LQEIDDGSSATDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQATLSR 189

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175
            +     ++  P           G R A+ +       G ++ VL+          +  +
Sbjct: 190 YRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLN----------ARFD 239

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------- 222
               +   L +Q +  +  + + +    P+++ GD N                       
Sbjct: 240 RPQANDDTLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYLLAPLRAPYREDSE 299

Query: 223 --------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                       +++    + +         +          +DY     +         
Sbjct: 300 LAILSGRFPMVPSLEEASGVDQVRWYTHFPNDPRV-QGPDRTLDYLFHSPSL-------- 350

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +    +S   ++S+H P++  +
Sbjct: 351 ---TRLDARVRRSDTLQISNHLPLAARF 375


>gi|327485101|gb|AEA79508.1| Extracellular deoxyribonuclease Xds [Vibrio cholerae LMA3894-4]
          Length = 869

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/373 (11%), Positives = 91/373 (24%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDDNQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
           R K V++ Q     + ++                +   R  +    ++ G    +     
Sbjct: 593 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 165 KSFCFLDSLENT---------------YSPSCSLLSQQAQ-WLKDWITQKKESL------ 202
                  +                   Y  +C      A   L D + +           
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDPDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  P ++  D+             N  I  +    D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|298483187|ref|ZP_07001367.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22]
 gi|298270704|gb|EFI12285.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22]
          Length = 305

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 81/288 (28%), Gaps = 37/288 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            +++++S+NI   + ++         K   +               ++ +QE        
Sbjct: 48  NQIKVMSFNIRYYNTKDTG------EKSWEARTAAFIPMIGEHKPTVIGMQEARPPQLKW 101

Query: 82  KVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                  +       R  N +                 K         P +     +   
Sbjct: 102 LEENWKDYGYVGKGRRANNANNDEFVPIFYRKKAVELIKWDCFWLSETPDVPGSQGWDST 161

Query: 141 GNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             R A   + +   +GKK + ++ H+     +   ++             + + + +++ 
Sbjct: 162 VPRIATWAIFKHIASGKKFFFINTHIDVGSTIAPGKS------------MEVIVNKMSEL 209

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
               +P ++  DFN++I+     +     +            K S             +D
Sbjct: 210 NPEGLPMLLTADFNKQIDS-DIFNGVKTFMTNVRLSAPITDSKYSYTGFGTANPY--IVD 266

Query: 259 YFVMD--QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +      +      I + +  I Y           +SDH PI    ++
Sbjct: 267 HIFCTGFKALKFETIDKVYQNITY-----------ISDHYPIIGKLEY 303


>gi|196000877|ref|XP_002110306.1| hypothetical protein TRIADDRAFT_21945 [Trichoplax adhaerens]
 gi|190586257|gb|EDV26310.1| hypothetical protein TRIADDRAFT_21945 [Trichoplax adhaerens]
          Length = 473

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 87/321 (27%), Gaps = 34/321 (10%)

Query: 17  TASVAQKVRLVSWNINTLSEQEG------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           TA+  +++R VS+NI   S               +          LL +   + +AD++ 
Sbjct: 147 TATTNKEIRTVSYNILGESYVGSKYAKRIYRNCPDYALDINYRQQLLMRELTSYNADLIC 206

Query: 71  LQEMGSYNAVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           LQE+       ++        +   + +    N+              + + ++ +    
Sbjct: 207 LQEVSHETFNNRLKYGLQFQGFQGLWKSRVFDNNDGLAIFYKTSKFDLISQHDLDLNASI 266

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD-----IHLKSFCFLDSLENTYSPSCS 182
                 +   +       +   V      + V        + +  C  ++       +  
Sbjct: 267 QKDSYQEALLNLIRPYDQLVHEVLSRSNVLQVALLRRKECNDQLICLANTHLYFRPLAEI 326

Query: 183 LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGN---------------NDDFW 225
           +   Q Q + + ++   +  S +P ++ GDFN   +                        
Sbjct: 327 IRLIQIQAITNHLSLISKSISDLPVILCGDFNSAPSSDTYQFLTNGYCKSQSTADESYLL 386

Query: 226 KTIDPNDSLIRFPKEKDSRCN--ANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNE 282
           K     +       +  S+     +        IDY    +                 N 
Sbjct: 387 KDAASFEFSHNLTFDALSQTLHCTHHTTNFSGTIDYIFGKRGYFNVKNAIPLLEVTNINA 446

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
           +      +  SDH  +  D  
Sbjct: 447 NHGLPTTEFPSDHLAVICDIS 467


>gi|331085596|ref|ZP_08334680.1| exodeoxyribonuclease [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330407483|gb|EGG86985.1| exodeoxyribonuclease [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 250

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 76/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                         + K  DADI  +QE          
Sbjct: 1   MKFISWNVNGIRACVQKGF---------------LDFFKEADADIFCIQESKMQEG-QLK 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  F++           +    ++  A+  K   +        G          R
Sbjct: 45  LELEGYHQFWN----------YAERKGYSGTAIFTKQEPLSV----AYGIGMEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ + + ++  +     +  +      +   +  + L+           
Sbjct: 91  -----VITLEFEEFYFVTVYTPNSQNELARLDYRMQWETEFLKYLKKLEA--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  +     +  F      +    
Sbjct: 138 PVIFCGDLNVAHREIDLKNPKTNQKNAGFTDEERGKFTELLSAGFIDTFRYFYPEQEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L                      SDHCP+ 
Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSECLKDRLRDAKILT-----------DVMGSDHCPVE 246

Query: 300 IDYD 303
           +D++
Sbjct: 247 LDFE 250


>gi|37993828|gb|AAR06994.1| sphingomyelinase [Bacillus cereus]
          Length = 252

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 82/229 (35%), Gaps = 26/229 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+  
Sbjct: 30  STNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVFD 83

Query: 77  YNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            +   ++           T         E         S+      +A+  K   V +  
Sbjct: 84  NSTSNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKIQ 143

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + Q
Sbjct: 144 Y-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVRTNQ 198

Query: 188 AQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
            + ++D+I  +   +    +  GD N        N        +KT+  
Sbjct: 199 LKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYTSMFKTLHA 247


>gi|78189393|ref|YP_379731.1| hypothetical protein Cag_1431 [Chlorobium chlorochromatii CaD3]
 gi|78171592|gb|ABB28688.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
          Length = 331

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 86/324 (26%), Gaps = 55/324 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVS-------LWKNSVKRTTSDY----TLLRQYAKNLD---- 65
            QK+ ++ WN+  L + +               ++ +          +R     L     
Sbjct: 20  PQKIGILWWNVENLFDTQDDPAKRDEDFTPNGKLQWSEKKLYLKQMRIRDLLGALAADKQ 79

Query: 66  ----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI+   E+ +     +           +      +        I  A+A     +
Sbjct: 80  MGSLPDIIGFAEVENKTVFEQTLQG-----VKTGSYKSVYYNSRDPRGIDVALAYNSATL 134

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           ++       +  K        R  V     +    + +L  H  S  F   L      + 
Sbjct: 135 KLQHSKAYSVPLKH-----PTRPVVVASFMVGRHPLHLLLNHWPSRAFDAELSEPNRIAA 189

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLI 235
           + +   A+ + D +          V+ GD N +       +    ++D          L+
Sbjct: 190 ATI---ARHIVDSLLT-ANPKADVVVMGDMNDEATNRSLANTLGSSMDGVQVKAAKGKLL 245

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----LIQESFSEILYNEDDIKSRGKR 291
                  +   +         ID+ ++           + +E+F  I Y      S    
Sbjct: 246 YNCWSGYNGIGSYYYRSKWQKIDHMLLTHGMLDRTGFYVTKEAFRCIDYPALLKSSGKGT 305

Query: 292 LS------------DHCPISIDYD 303
            S            DH P+ +   
Sbjct: 306 WSTYEKRVYKGGYADHLPLYLKVS 329


>gi|86131717|ref|ZP_01050314.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
 gi|85817539|gb|EAQ38713.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
          Length = 343

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 84/306 (27%), Gaps = 56/306 (18%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           ++ +L+ F           + L+++N+   +           V+        +  + ++ 
Sbjct: 81  HIFSLIRFGGGSDTKQVDTLTLLTYNVRQFN-------VYGWVEEANVGKRAIA-FIEDQ 132

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           + DIV LQE                      ++     K     +      +  K   V 
Sbjct: 133 NPDIVCLQE-------------YHPDFELDAKKYPFKHKVMRPANSKFGQVIFSKFPIVH 179

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             S                  +   +++    I   ++H +SF    SL N    +   L
Sbjct: 180 SGSLDFG--------KKGNNGIYADIKVGEDTIRAYNMHFQSFRLSPSLNNLQKENSKKL 231

Query: 185 --------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                    +Q   +K ++  +  S    ++AGDFN                   D +  
Sbjct: 232 LGRLGVAFEKQEGQVKKFLQSEAASPHKVIVAGDFNNSATSYMYRKV------RGDKVDA 285

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           F K               + ID+ + D+                  D        LSDH 
Sbjct: 286 FAKAGSGTGATFWFDIIPLRIDFILADEQLEVL-------------DFETYGDIDLSDHK 332

Query: 297 PISIDY 302
           P    +
Sbjct: 333 PSMATF 338


>gi|170755597|ref|YP_001781409.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B1 str. Okra]
 gi|169120809|gb|ACA44645.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B1 str. Okra]
          Length = 352

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 101/311 (32%), Gaps = 44/311 (14%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               +V++NI               G     +S ++T  +   +  + K  ++  +FLQE
Sbjct: 53  DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRRITSFLKKDNSSFIFLQE 112

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127
           + + +   + F  + +    ++ +  + S   +       + + K +  V      L + 
Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 +  +    +       ++    +  V   + +    ++S  + Y     +  QQ
Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQ 230

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236
             +LK++I ++ +     ++ GD+N  I               D   K  +    +    
Sbjct: 231 LSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 290

Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID F++  N     ++       Y+ +   +    
Sbjct: 291 IADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNIEATSVKA------YSMEFKNT---- 340

Query: 292 LSDHCPISIDY 302
             DH P+ +++
Sbjct: 341 --DHNPVKMEF 349


>gi|91775775|ref|YP_545531.1| endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus
           KT]
 gi|91709762|gb|ABE49690.1| Endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus
           KT]
          Length = 235

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 80/284 (28%), Gaps = 51/284 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           QK+RL+ +NI+     +G             D + +    + LD DI   QEM +  +  
Sbjct: 2   QKIRLLCFNIHGGRSLDG-----------KRDLSRVHGLMQRLDIDIGVFQEMETRPS-R 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                +   +                        +  +   +    + L    ++     
Sbjct: 50  GGASNDVQTLAGPERPHHLICPSMEEGAGWYGNLIVSRYPIIRGLRHNL----ETHPSLE 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R A + LV++   ++ V+  HL    F                 +A+ L   +   +E 
Sbjct: 106 PRYAADALVQLPWGRLRVIGTHLSLSVF-------------ERRSEAENLLRLMQAVEEE 152

Query: 202 LV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++ GD N             +          F          +        +D  
Sbjct: 153 ERSPILLMGDINEWQVPSPLLRYLNR---------CFTPLPCKPTFPSLCPVF--RLDRV 201

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             D                +         ++LSDH P+ ++ ++
Sbjct: 202 WHD--------APGIRVTAHRLP--GKGIRKLSDHLPLVVELEY 235


>gi|28973671|gb|AAO64154.1| unknown protein [Arabidopsis thaliana]
 gi|29824267|gb|AAP04094.1| unknown protein [Arabidopsis thaliana]
 gi|110737063|dbj|BAF00485.1| hypothetical protein [Arabidopsis thaliana]
          Length = 321

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 77/297 (25%), Gaps = 44/297 (14%)

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
           R  +    +    KNL AD   LQE+  Y++  +    +        +R     +     
Sbjct: 23  RWKARSHAILSVLKNLQADFFCLQEVDEYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAI 82

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------------------ 144
               + A      R+           DS S +  +                         
Sbjct: 83  FYKPSCAELVTKERIEYNDLVDSIKADSVSCSEQKIETSNEGKDSRKDSRDLNDPLVRLK 142

Query: 145 ----AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +     IN     ++ +      +   L +        L  +    K  I+ + E
Sbjct: 143 RDCVGIMAAFRINKPFQHIVIVANTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFE 202

Query: 201 SLVPFVIAGDFNRKINY----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
                ++AGDFN                   +   +   P      +   +      N  
Sbjct: 203 CTPSLLLAGDFNSIPGDMVYSYLVSGNAKPTETIEEEEAPVPLSSVYEVTRGEPKFTNCT 262

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILY----NEDDIKSRGKRLSDHCPISIDYD 303
                 +DY  +  +   F+   S  ++      +           SDH PI  +++
Sbjct: 263 PGFTNTLDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFE 317


>gi|317496610|ref|ZP_07954957.1| exodeoxyribonuclease III [Gemella moribillum M424]
 gi|316913275|gb|EFV34774.1| exodeoxyribonuclease III [Gemella moribillum M424]
          Length = 254

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+N+N L      +  ++                K LDAD   LQE          
Sbjct: 1   MKCISFNVNGLRAIVNKNFEED---------------FKKLDADFFCLQETKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++           +    ++  A+  K+  +       +   D+  R    
Sbjct: 45  LQFDGYYSYFN----------YAERKGYSGTAIYTKHKPLNVNYGIGIDEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   K + + ++  +        +               L            
Sbjct: 91  -----VITLEYDKFFFITVYTPNSGSELKRLDYRMTWEEDFKNYLLELNK--------TK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                         + +  +     +  F         A 
Sbjct: 138 GVVVCGDLNVAHTEIDLKNPKSNTKNAGFTPEEREKFTKLLDAGFIDTFRYFNPELTGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  ++  K+L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLTSRDLEKYLVSAKIHNDIL-----------GSDHCPVE 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 VVLN 250


>gi|307297053|ref|ZP_07576869.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1]
 gi|306877579|gb|EFN08807.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1]
          Length = 265

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 88/311 (28%), Gaps = 74/311 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +Q + + SWNIN                   +   ++ ++      DI+ LQE      V
Sbjct: 2   SQTLSIASWNIN----------------SVRARLDIVERFLTEEAPDILCLQE---TKVV 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++FP   +       +++N         +H  +A+  +               ++    
Sbjct: 43  NEIFPTAMFRQLGYVHQVLN------GQRMHHGVAIMSRVPIHEDDRLDWQANGEARH-- 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V + ++     + + ++++ +       +           Q+  +L+  I     
Sbjct: 95  -----VGVRLDNG---VRIENVYVPAG-----GDIADREVNPKFGQKLDFLERMIQWSSG 141

Query: 201 -SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
               P ++ GDFN                   +     +   +    ND +        +
Sbjct: 142 LEDKPTILTGDFNIAPMECDVWSHKQLLNVVSHTPIECEILARLQASNDWVDIGRHFYPA 201

Query: 244 RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                     +            +D+  M ++     I            +      + S
Sbjct: 202 PQRLYTWWSYRAKDWAESDRGRRLDHMWMTRDVAGKAISHRVV-------EPARNWGKPS 254

Query: 294 DHCPISIDYDF 304
           DH PI  ++ F
Sbjct: 255 DHIPIITEFAF 265


>gi|157146576|ref|YP_001453895.1| hypothetical protein CKO_02337 [Citrobacter koseri ATCC BAA-895]
 gi|157083781|gb|ABV13459.1| hypothetical protein CKO_02337 [Citrobacter koseri ATCC BAA-895]
          Length = 253

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 76/288 (26%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ N +                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVSADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  T   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHVENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              +  R  +   +      + I V+ +HL                      Q   L +W
Sbjct: 114 VGGSEKRGVLYCRIVPPMLAQPIHVMCVHLGLREG-------------HRQAQLDMLVEW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +        P V+AGDFN               ++       F +               
Sbjct: 161 VNA-LPESEPVVVAGDFNDWRQKANYPLKASAGLEE-----IFTRAHGRPARTFPVRLPI 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +                           + LSDH P+S + 
Sbjct: 215 LRLDRIYVKNANASSPAALP-----------LRNWRHLSDHAPLSAEI 251


>gi|229817407|ref|ZP_04447689.1| hypothetical protein BIFANG_02669 [Bifidobacterium angulatum DSM
           20098]
 gi|229785196|gb|EEP21310.1| hypothetical protein BIFANG_02669 [Bifidobacterium angulatum DSM
           20098]
          Length = 297

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/323 (9%), Positives = 84/323 (26%), Gaps = 57/323 (17%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F       VA  + + + N+N +                 +    +  +A     ++  +
Sbjct: 2   FSRIAVTLVAMSITITTSNVNGIRA---------------AKRKGIETWAAQHTPNVWCM 46

Query: 72  QEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           QE+ +  +       +   + T      ++  ++ +           +A+      +   
Sbjct: 47  QEVRAPQSEIDPIFDEFAFEYTTAGAIDSQDRLDRTNEVCRVKGRAGVALLAD---LDVT 103

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           +        +      R     +    G  + V+ +++ +    D            L  
Sbjct: 104 ARRYGLPGLTQDVDSGRWIENDITTPAGNLLTVVCVYVHAGNTDD--PVKMEQKYRFLDT 161

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDP 230
               + +   +  +     ++ GDFN         +                   + +  
Sbjct: 162 MLNRMGELRDEAADGGRQALLCGDFNIAHTSADIKNAKANEKHAGFLPEERAYVDRWLGE 221

Query: 231 NDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYN 281
              +    +              +           +DY        +  +        ++
Sbjct: 222 YGFVDVTRRLAGDIQGPYTWWSQRGRAFDNNVGWRLDYQFATPALAETAVS-------FD 274

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
            D   S   R SDH P++I Y+F
Sbjct: 275 IDKAPSYDTRWSDHAPLTITYEF 297


>gi|225682536|gb|EEH20820.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Paracoccidioides brasiliensis Pb03]
          Length = 607

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/360 (10%), Positives = 85/360 (23%), Gaps = 75/360 (20%)

Query: 20  VAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +K   +S+N      +  +      +          LL    K  +ADIV LQE+   
Sbjct: 218 QNEKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLLLNEIKGYNADIVCLQEIDQG 277

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL- 131
           +       +  +  +         ++     +              K + + +       
Sbjct: 278 SYHGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQ 337

Query: 132 ---------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYS 178
                    G  D ++R   +  + ++      ++G+++ V+++HL        ++   +
Sbjct: 338 TAVRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQA 397

Query: 179 PSCSLLSQQAQWLKDWITQKKESLV---------------------------------PF 205
                   Q       I    +                                    P 
Sbjct: 398 AILMEEVTQLAEKYAKIPACIDKTAFRFSEPENSTDGDGTATPAEPAPSVEYSSGSQIPL 457

Query: 206 VIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
           +I GDFN                  ++       +  +        F  +          
Sbjct: 458 IICGDFNSYPGSAVYELMNRGHLIEDHPDLEKRLYGNLSRLGMSYPFNLKSAYGAIGELE 517

Query: 246 NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             N        IDY      +     +                     SDH  I  ++ F
Sbjct: 518 FTNYTPDFADVIDYIWYTSNSLQVTGLLGEVDREYLQRVPGFPNYHFPSDHLAIMAEFSF 577


>gi|147920374|ref|YP_685852.1| exodeoxyribonuclease III [uncultured methanogenic archaeon RC-I]
 gi|110621248|emb|CAJ36526.1| exodeoxyribonuclease III [uncultured methanogenic archaeon RC-I]
          Length = 257

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 81/306 (26%), Gaps = 77/306 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
           ++ ++SWN+N L                         + +  + DI+ LQE         
Sbjct: 3   ELEILSWNVNGLRAILKKGF---------------VDFMQEKNPDILCLQETRASEEQLP 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++     + +++++     +          + +A+  K   +       +   D   R 
Sbjct: 48  PEIMTSWGYHVYFASGEKKGY----------SGVAILSKVKPLSVARGFGIPEFDREGR- 96

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   ++  +     +L+I+  +               +   + A  L       K 
Sbjct: 97  --------VLIADYGAFVLLNIYFPNGKASPERLAYKMRFYNAFLEYADRL-------KA 141

Query: 201 SLVPFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRC 245
                V+ GD N     +                    +   +  +  +  F    D   
Sbjct: 142 QGRKIVVCGDVNTAHKEIDIARPRENSKISGFLPVERAWMDKLIAHGYVDTFRLFNDQPG 201

Query: 246 NANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              IDYF + +N  + L        +             SDHCP
Sbjct: 202 QYTFWDTVTRARERNVGWRIDYFFVSENLKEQLKAAFIMTEI-----------MGSDHCP 250

Query: 298 ISIDYD 303
           I I  D
Sbjct: 251 IGIRLD 256


>gi|94495762|ref|ZP_01302342.1| exodeoxyribonuclease III [Sphingomonas sp. SKA58]
 gi|94425150|gb|EAT10171.1| exodeoxyribonuclease III [Sphingomonas sp. SKA58]
          Length = 262

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NIN                   +    L ++      D+  LQE+ + +     
Sbjct: 5   MRIATFNING----------------IKARLPRLLEWLDETRPDVACLQEIKTSDE---- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKDSFSRAGN 142
                            +            +A+  + +  V  +       +D  SR   
Sbjct: 45  ------TFPIKDIEDAGYGAIWHGQKGFNGVAILARGDAPVEVRRGLEGEPEDEHSRY-- 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +E + K + V  I+L +       +  Y        +    L+    +     
Sbjct: 97  -------LEADVKGVRVASIYLPNGNPQPGPKFDYK------LRWMDRLRRRAAEIWTEE 143

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           VP V+AGD+N                       +   + + ++   +     +       
Sbjct: 144 VPAVLAGDYNVIPRDVDTFSVKAMADDALMQPESRAAYRRMLNDGWTDAILSRHPAGGVW 203

Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              + +           ID+ ++   A   LI           D      ++ SDH P  
Sbjct: 204 TFWDYQANSWPRDAGFRIDHLLLSPAAADRLIDA-------RVDRDFRGREKASDHAPTW 256

Query: 300 IDY 302
           ++ 
Sbjct: 257 VEL 259


>gi|302555042|ref|ZP_07307384.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472660|gb|EFL35753.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 439

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 96/325 (29%), Gaps = 55/325 (16%)

Query: 2   IRKYVLALVFFLVPCTA-----------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT 50
           +++ +  LV   + CT            + +    ++++N+  L E       + +    
Sbjct: 1   MKRLIGTLVATALACTGLAATSAAPAAAADSGSFSVLTYNVAGLPEGLSSGHPEKNTPLI 60

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
           +               DIV +QE  +Y+A             Y+ +   + +        
Sbjct: 61  SPRLGA---------YDIVNVQEDFNYHA-----------ALYAGDDHAHRTATSGGVPF 100

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              +     +     Q         +        ++  +    G  + + ++H  +    
Sbjct: 101 GDGLNTLSDHPFEDFQRVKWSKCTGTNCLTPKGFSLARVRLAEGVYVDLYNVHTNADDTA 160

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
           D+L    +          + L D+I     +    ++ GD N +    G  D+    +  
Sbjct: 161 DALAARRAN--------VEQLSDFIQAN-SAGNAIIVMGDTNTRYTRSG--DNIRTLLSE 209

Query: 231 NDSLIRFPKEKDSR-----------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
           N     + +                C       +   +D  +   +    L    +    
Sbjct: 210 NGLTDAWVQRVKGGTPPAQGGAPLVCPTTAPTDDCEVVDKILYRGSKLVNLNATRYHNDW 269

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
            +   + S G  LSDH P ++D+ +
Sbjct: 270 AS--FLDSAGGNLSDHFPHTVDFSY 292


>gi|256028521|ref|ZP_05442355.1| exodeoxyribonuclease III [Fusobacterium sp. D11]
 gi|289766441|ref|ZP_06525819.1| exodeoxyribonuclease III [Fusobacterium sp. D11]
 gi|289717996|gb|EFD82008.1| exodeoxyribonuclease III [Fusobacterium sp. D11]
          Length = 253

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 80/301 (26%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                 +       Y    +ADI  LQE    +A    
Sbjct: 1   MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                         + ++   ++   
Sbjct: 91  -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMIWEDEFRKYLKNLEKKK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +  +  +  F     +     
Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +   K L+       +             SDHCP+ 
Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQI-----------EGSDHCPVV 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|468371|gb|AAA21019.1| apurinic/apyrimidinic endonuclease [Rattus norvegicus]
          Length = 316

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 51  TSASGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 95

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                      K    +         +    S+ + ++ + +  +   +        G  
Sbjct: 96  KCSE------NKLPAELQELPGLTHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 145

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V        +   ++  ++ +                   +  + L   
Sbjct: 146 EEEHDQEGRVIVA-----EFESFILVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKDLA-- 198

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 199 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQEAQGFGEMLQAVPLADSFR 252

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++ Q+    L                   
Sbjct: 253 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPALCDSKIRSKAL--------- 303

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 304 --GSDHCPITL 312


>gi|332877167|ref|ZP_08444917.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332684910|gb|EGJ57757.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 348

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/352 (10%), Positives = 95/352 (26%), Gaps = 64/352 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVR-----LVSWNINTLSEQEGVSLWKN----------- 45
           +++  + +  F++  T + AQ+ +     +  +N   L +        +           
Sbjct: 1   MKRMFMVMGLFVLLFTVARAQEKKFGMYAVGFYNQENLFDTIHDEGKNDFEYLPDGAMKW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
           +  +  +    +      +  D        ++ + E+ +   +  +  +       +   
Sbjct: 61  NGMKYFAKLKNMATVLSEMGTDKLPNIGASVIGVSEVENSRVMQDLVEQPPLK---ARGM 117

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
              H +      +  A+    +     +        +   S    R  + +  ++ G  +
Sbjct: 118 KFVHIEGPDKRGVDCALIYNPRFFTPEKSFLQPYVYEAKDSAYHTRGFLTVQGKLAGDDV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
             +  H  S   +                Q + LKD I++     +  ++ GD N     
Sbjct: 178 TFIVCHWPSRAAVSYYRERAGK-------QVRMLKDSISK-ANPEMKIIVMGDMNDDPFS 229

Query: 218 LGNNDDFWKTIDPND------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                      +  D          +                    D  VM  N      
Sbjct: 230 PSMAKALGAKREMKDVGKSDLYNPWWNVLAKDGRGTLMYDGKWNLFDQIVMTPNLLDLDG 289

Query: 272 QESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
           ++ +S + + +++I SR                           SDH P+ +
Sbjct: 290 KKDYSTLKFFKNEIFSRNYLFQTEGRYKGNTKRTHAGGVWLNGYSDHLPVVV 341


>gi|302503490|ref|XP_003013705.1| hypothetical protein ARB_00156 [Arthroderma benhamiae CBS 112371]
 gi|291177270|gb|EFE33065.1| hypothetical protein ARB_00156 [Arthroderma benhamiae CBS 112371]
          Length = 691

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/363 (10%), Positives = 96/363 (26%), Gaps = 84/363 (23%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K  ++++N   +  +  +      +          LL    +  DADIV LQE+   + 
Sbjct: 306 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 365

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++  S  +              K + + +         
Sbjct: 366 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 425

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++V     ++G++I V++       +  + ++     
Sbjct: 426 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVN---AHIYWDPAYKDVKLVQ 482

Query: 181 CSLLSQQAQWLKD---------------------------------------WITQKKES 201
            +++ ++   L +                                        +     S
Sbjct: 483 SAIMMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETNNSENTSPPTPVEPSPSVEYSSPS 542

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245
            +P ++ GDFN + +                    D  +  +        F  +      
Sbjct: 543 QIPILVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRDRLYGNLTRQGMTHPFTLKSAYSAI 602

Query: 246 ----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISI 300
                 N        IDY     N  +        +  Y +           SDH  +  
Sbjct: 603 GELSFTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMA 662

Query: 301 DYD 303
           ++ 
Sbjct: 663 EFS 665


>gi|260174301|ref|ZP_05760713.1| hypothetical protein BacD2_20756 [Bacteroides sp. D2]
          Length = 304

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 85/288 (29%), Gaps = 37/288 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            +++++S+NI   +  +  +  K+   RT +         +     ++ +QE        
Sbjct: 47  NQIKVMSFNIRYYNTND--TGDKSWDARTAAFIP----MIEEQKPTVIGMQEARPPQLKW 100

Query: 82  KVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                  +       R  N +                 K         P +     +   
Sbjct: 101 LEENWKDYGYIGKGRRANNANNDEFVPIFYRKKAVELVKWDCFWLSETPDVPGSQGWDNT 160

Query: 141 GNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             R A   + +   +GKK + ++ H+     +   ++             + + + +++ 
Sbjct: 161 VPRVATWAIFKHIASGKKFFFINTHIDVGSTIAPGKS------------MEVIVNKMSEL 208

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
               +P ++  DFN++I+     +     +            K S             +D
Sbjct: 209 NPEGLPMLLTADFNKQIDS-DIFNGVKTFMTNVRLSAPVTDSKYSYTGFGTANPY--IVD 265

Query: 259 YFVMD--QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +      +      I + +  I Y           +SDH PI    ++
Sbjct: 266 HIFCTGFKALKFETIDKVYQNITY-----------ISDHYPIVGKLEY 302


>gi|158338616|ref|YP_001519793.1| hypothetical protein AM1_5519 [Acaryochloris marina MBIC11017]
 gi|158308857|gb|ABW30474.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 316

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 94/292 (32%), Gaps = 62/292 (21%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +  +P   +    +R++S+NI                     DY  ++Q  +  D DI+F
Sbjct: 84  WLGLPSLGAQPSGLRVMSYNIW----------------TQNQDYGAIQQSIQQEDPDILF 127

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           L E+ + +A+  +  +  +                 +N    A   R   +    +   +
Sbjct: 128 LTEI-TKSAMRDLENRLDY------------PYSQRSNRGSNAFFSRYPILSATPEYPNV 174

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                +FS       +   ++   + + V+ IH                S ++ +QQ + 
Sbjct: 175 TEHGLTFS-------LVTQIQTPQEVLTVVGIHPPIPL--------TRSSFAVRNQQFER 219

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L  +I Q        ++ GDFN        +    +    + +  +      S  ++  +
Sbjct: 220 LAPFIQQVPNR---VIVLGDFNTSPWSPYFDQFLQEANLWSATRGQGIWATWSYESSLPH 276

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              KIPID+                +   +   D  +     SDH P+  + 
Sbjct: 277 WFAKIPIDHI---------------TNRGFVCMDAWAGRANGSDHRPVIAEL 313


>gi|260425499|ref|ZP_05779479.1| exodeoxyribonuclease III [Citreicella sp. SE45]
 gi|260423439|gb|EEX16689.1| exodeoxyribonuclease III [Citreicella sp. SE45]
          Length = 262

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 71/307 (23%), Gaps = 73/307 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       L+ Q       D++ LQE  S      
Sbjct: 2   SFTLATWNIN----------------SVRLREALVCQLLTEEAPDVLCLQECKS------ 39

Query: 83  VFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                   I     R + +          +  +A+  K                +     
Sbjct: 40  ----PVEKIPLEAFRALGYGHIVARGQKGYNGVAILSKLPIRDVGDRDFAQLGHARH--- 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               V   +E     + V + ++ +    D  +   +            ++DW   ++  
Sbjct: 93  ----VAAELENG---VTVHNFYVPAG--GDIPDRELNEKFGQKLDYLAEMRDWFRAERFG 143

Query: 202 LVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCN 246
               ++ GD N         ++    K +                 + +   ++      
Sbjct: 144 KS--ILVGDLNIAPREDDVWSHKALLKVVSHTPVEVAALAETQEAGNWVDITRKDIPEGQ 201

Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+     +                        ++ SDH 
Sbjct: 202 LYSWWSYRARDWDTADKGRRLDHVWATPDIAGAGHSS-------RILRAARGWEKPSDHA 254

Query: 297 PISIDYD 303
           P+   +D
Sbjct: 255 PVLATFD 261


>gi|6753086|ref|NP_033817.1| DNA-(apurinic or apyrimidinic site) lyase [Mus musculus]
 gi|113985|sp|P28352|APEX1_MOUSE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|220337|dbj|BAA14382.1| APEX nuclease precursor [Mus musculus]
 gi|533108|gb|AAC13769.1| apurinic/apyrimidinic endonuclease [Mus musculus]
 gi|533329|dbj|BAA07270.1| APEX nuclease [Mus musculus]
 gi|12850573|dbj|BAB28774.1| unnamed protein product [Mus musculus]
 gi|30851442|gb|AAH52401.1| Apurinic/apyrimidinic endonuclease 1 [Mus musculus]
 gi|148688888|gb|EDL20835.1| apurinic/apyrimidinic endonuclease 1 [Mus musculus]
          Length = 317

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 52  TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 96

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                      K    +         +    S+ + ++ + +  +   +        G  
Sbjct: 97  KCSE------NKLPAELQELPGLTHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 146

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V        +   ++  ++ +                   +  + L   
Sbjct: 147 EEEHDQEGRVIVA-----EFESFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKDLA-- 199

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 200 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 253

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 254 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 304

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 305 --GSDHCPITL 313


>gi|218130823|ref|ZP_03459627.1| hypothetical protein BACEGG_02418 [Bacteroides eggerthii DSM 20697]
 gi|217987167|gb|EEC53498.1| hypothetical protein BACEGG_02418 [Bacteroides eggerthii DSM 20697]
          Length = 371

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 83/322 (25%), Gaps = 79/322 (24%)

Query: 14  VPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           VP TA    +       + + ++N++               + T      + +Y +    
Sbjct: 98  VPATAPAPNREGKSGGCLTVATYNVHHFG-----------NEITGYSCKEIARYMQQRHV 146

Query: 67  DIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           D++  QE G       +++ +      + +  + +                   +R    
Sbjct: 147 DVLCFQEFGDNPHFTTDSLRRALSHWPYALIPADDS------------------IRGILP 188

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE------- 174
             +   YPL   +       +  ++   + +    + +L+ HL++     +         
Sbjct: 189 VAVFSRYPLAEGRFITYPRSSNCSMACDIVLGADTLRLLNNHLQTTSVSQNRRKWERELA 248

Query: 175 -NTYSPSCSLLSQQAQWLKD-----------WITQKKESLVPFVIAGDFNRKINYLGNND 222
            N        +   A+ L +            +     S  P ++ GDFN   +      
Sbjct: 249 ANDTRREAQAVQDAAETLHENFVKRAAQTDSIVRLVIASPHPVLVCGDFNSLPSSYTYRQ 308

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                         F           +  +  + IDY                       
Sbjct: 309 L------SGILQDGFKTGGHGYMYTYRYAKRMLRIDYAFHSSKLDC-------------T 349

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
           D         SDH P+     +
Sbjct: 350 DYYSPDLDLCSDHNPVIFTVKY 371


>gi|153830066|ref|ZP_01982733.1| hypothetical protein A59_2694 [Vibrio cholerae 623-39]
 gi|148874465|gb|EDL72600.1| hypothetical protein A59_2694 [Vibrio cholerae 623-39]
          Length = 400

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 4   GDLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 63

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 64  IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 123

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 124 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 183

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 184 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 243

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 244 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 303

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 304 DSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 363

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 364 RASDHDPAVLELN 376


>gi|159045821|ref|YP_001534615.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae
            DFL 12]
 gi|157913581|gb|ABV95014.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae
            DFL 12]
          Length = 1123

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/354 (12%), Positives = 85/354 (24%), Gaps = 72/354 (20%)

Query: 17   TASVAQKVRLVSWNI-------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
               V   +++VS+N+         L++         S +        L      +DAD+ 
Sbjct: 662  APDVGGSLKVVSFNVLNYFTTLEGLTDNGNTPRGAESPEELERQAEKLVSAFLEMDADVY 721

Query: 70   FLQEMGSY-----------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVR 117
             L E+ +             A+  +  +            ++  +     D I      +
Sbjct: 722  GLIELENDFASDPNDPTDVTAIQDLVDRLNAASGAEIYDFVDPGQEFVGTDAIAVGFIYK 781

Query: 118  KKNV-------RVLQQSYPLL--------GAKDSFSRAGNRRAVELLV--EINGKKIWVL 160
               V        +  Q++           G +     + NR AV        +G +   +
Sbjct: 782  TTTVGLVGDAAILDTQAFLDPLDDGDDSNGDETPNGDSFNRAAVAQTFVEIESGGEFTAV 841

Query: 161  DIHLKSFCFLDSLENT--------YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
              H KS   L               + +    +                    +I GD N
Sbjct: 842  VNHFKSKGSLTGAAEDENAGDGAGNNNATREAAAAELAAWLETNPTGSDDPDVLILGDLN 901

Query: 213  RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                          T++                   +       +DY +   +    +  
Sbjct: 902  SYARETPI-----TTLEDAGYTNLVRALSGEEAYGYRFSGEVGSLDYAMGTDSMTSQVTG 956

Query: 273  ESFSEILYNEDDIKSRGK-----------------------RLSDHCPISIDYD 303
                 I  +E  I    +                       R SDH P+ +  D
Sbjct: 957  AVEWTINSDEFVIYDYNEESTFGSPILRPTDQGLFDGTNPARNSDHDPVIVGLD 1010


>gi|49082810|gb|AAT50805.1| PA4172 [synthetic construct]
          Length = 267

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 83/304 (27%), Gaps = 70/304 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++ ++N+N                   +    L  + +    DIV LQE+ + +A  
Sbjct: 2   DTLKIATFNVNG----------------IQTRLAALLAWLEREAPDIVCLQELKTPDA-- 43

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  ++ + L+    L G         
Sbjct: 44  --------RFPAAALEKAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV          + V  ++L +       +  Y  +        + L     +  ES
Sbjct: 96  LEAAV--------DGLLVASLYLPNGNPQPGPKFDYKLA------WFEHLIRHAAELMES 141

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+AGDFN  ++     D               + ++ +     +    +    R  
Sbjct: 142 GHPVVLAGDFNVVLSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRL 201

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ ++  +    L            D      +  SDH P 
Sbjct: 202 YTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGV-------DRWVRGEEHASDHAPA 254

Query: 299 SIDY 302
            +  
Sbjct: 255 WVSL 258


>gi|330976189|gb|EGH76251.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 233

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 41/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107
              LR+  + + ADIVFLQE+     +   KV    T   +     S      + +    
Sbjct: 12  LPELREAVRTVSADIVFLQEVHGEQQSHARKVKDWPTISQYEFLADSMWSDFAYGRNAVY 71

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            D     A+  K   +  ++  +     S      R  +  ++E+      V  + +   
Sbjct: 72  PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILEVPHAG-RVHAVCVHLG 125

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         +   QQ + L + + +      P ++AGDFN              +
Sbjct: 126 LR-----------ENHRRQQLKLLNELMAR-IPEGEPVIVAGDFNDW------RRRADAS 167

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +  +     F +   +   +       + +D   +           S             
Sbjct: 168 LQGSGLHEVFVERFGAPAKSFPARWPLLCLDRIYVRNATSHRPKVLS-----------SR 216

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P++++  
Sbjct: 217 PWSHLSDHAPLAVELT 232


>gi|296532202|ref|ZP_06894954.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957]
 gi|296267473|gb|EFH13346.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957]
          Length = 268

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 74/307 (24%), Gaps = 72/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL++WNIN                       LL +  + L+ D+V LQE        ++
Sbjct: 4   LRLLTWNIN----------------SVRLRMPLLTRLVQELEPDVVCLQETKCP---DEL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP                 +       +   A+  +     +Q  P   AK      G  
Sbjct: 45  FPHEPLAALGYAH------RAVRGMKGYNGTAILSRLPFAPRQDDPDWCAKGDCRHVG-- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
               + +++ G       + L  F      +     +    + +  ++ +          
Sbjct: 97  ----VDLDVPGG------LELHDFYVPAGGDIADREANPKFAHKLDFVAEATAWNAARGP 146

Query: 203 -VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               V+ GD N                   +                             
Sbjct: 147 AKRAVMVGDLNIAPLECDVWSHRQLLDVVSHTPVEVAALTAWQQAGAWHDAIRHFVPPPE 206

Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+  + Q+    L +                  + SDH
Sbjct: 207 KVYTWWSYRARDWEASDRGRRLDHVWVSQDLAGSLRRHHIH-------KAARGWTQASDH 259

Query: 296 CPISIDY 302
            P+ ++ 
Sbjct: 260 VPVLVEL 266


>gi|160891380|ref|ZP_02072383.1| hypothetical protein BACUNI_03830 [Bacteroides uniformis ATCC 8492]
 gi|156858787|gb|EDO52218.1| hypothetical protein BACUNI_03830 [Bacteroides uniformis ATCC 8492]
          Length = 217

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 62/242 (25%), Gaps = 36/242 (14%)

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +QE+              +            +         T      +         P 
Sbjct: 1   MQEVLHNQMEDLKRGLPQYTALGVGRDDGKEAGEYCPIFFRTDRFTLVEYGNFSLSEQPE 60

Query: 131 LGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                 +  + NR     ++  + NG+K    + HL      +  +        L+  + 
Sbjct: 61  TIGIKGWDASYNRVTTWAILQEKNNGQKFVYFNTHL-----DNDGKTARKEGVQLILDKI 115

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + +           +P +I GDFN             +T++             +   + 
Sbjct: 116 KEIA--------PDMPAIITGDFNCTPGEEP-----LQTLEKGGMENAAKTAAVTYGPSW 162

Query: 249 KNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                       ++ +DY  + +               Y     K     LSDHCPI ++
Sbjct: 163 SFHDFGRLPVEERVLLDYVFVTK---------GAKIDRYRVIQDKPENSYLSDHCPILVE 213

Query: 302 YD 303
             
Sbjct: 214 LT 215


>gi|84662732|ref|NP_001014245.2| deoxyribonuclease-1-like 1 precursor [Rattus norvegicus]
 gi|91206585|sp|Q2QDE7|DNSL1_RAT RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X;
           AltName: Full=Deoxyribonuclease I-like 1; Short=DNase
           I-like 1; Flags: Precursor
 gi|73921496|gb|AAZ94278.1| DNase X [Rattus norvegicus]
 gi|149029873|gb|EDL84985.1| deoxyribonuclease 1-like 1, isoform CRA_a [Rattus norvegicus]
          Length = 312

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 78/303 (25%), Gaps = 33/303 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  V+A +  L+          R+ ++N + L+                S    L Q  
Sbjct: 19  MRGLVVASLLILLVGGT---DAFRICAFNAHRLTLT---------KVIKESVMDTLVQIL 66

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI+ LQE+   +    +F         S   L +     S          R    
Sbjct: 67  ARC--DIMVLQEVVDSSQNTVLFLLQKLQSSKSYSFLNSSLLGRSTYKEKYVYIYRSDKT 124

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPS 180
           +VL          +       R        +  K +  V+ + L +       E      
Sbjct: 125 QVLN-----FYQYNDTEDIFAREPFVAQFTLPSKILPSVVLVPLHTTPKDVEKELNALYD 179

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             L   Q                  ++ GDFN     L         +           +
Sbjct: 180 VFLDVSQRWQ-----------NENVILLGDFNADCASLAKKRLNSLLLRTKAGFHWVIPD 228

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +              I   +  Q   K L   +  +        +    R+SDH P+ +
Sbjct: 229 GEDTTVRASTNCTYDRI--VMHGQGCQKLLKAAATFDFPRRFQLTEEEALRVSDHYPVEV 286

Query: 301 DYD 303
           + +
Sbjct: 287 ELN 289


>gi|126463266|ref|YP_001044380.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029]
 gi|126104930|gb|ABN77608.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029]
          Length = 262

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 70/306 (22%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       L+ +       DI+ LQE  S      
Sbjct: 2   TFTLATWNIN----------------SVRLREALVSRLLTEEMPDILCLQECKSPV---- 41

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +   L  H         +  +A+  K   V    +       +      
Sbjct: 42  -----EKMPLEAFRALGYHWCVARGQKSYNGVAILSKLPLVDAGDHDFADLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   +E     + + + ++ +    D  +   +            ++DW        
Sbjct: 93  ---VSAALENG---VTIHNCYVPAG--GDIPDREQNVKFGQKLDYLTRMRDWCRADTPKK 144

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GD N                  ++     D    +  + + I   ++       
Sbjct: 145 A--ILVGDLNIAPREDDVWNHKSLLKIVSHTPIEVDHLNALMESGAWIDVTRKDLPEGRL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                         + SDH P
Sbjct: 203 YSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHGS-------RILKAARGWLQPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|302665175|ref|XP_003024200.1| hypothetical protein TRV_01633 [Trichophyton verrucosum HKI 0517]
 gi|291188246|gb|EFE43589.1| hypothetical protein TRV_01633 [Trichophyton verrucosum HKI 0517]
          Length = 693

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/363 (10%), Positives = 96/363 (26%), Gaps = 84/363 (23%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K  ++++N   +  +  +      +          LL    +  DADIV LQE+   + 
Sbjct: 308 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 367

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++  S  +              K + + +         
Sbjct: 368 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 427

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++V     ++G++I V++       +  + ++     
Sbjct: 428 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVN---AHIYWDPAYKDVKLVQ 484

Query: 181 CSLLSQQAQWLKD---------------------------------------WITQKKES 201
            +++ ++   L +                                        +     S
Sbjct: 485 SAIMMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETNNSENTSPPTPVEPSPSVEYSSPS 544

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245
            +P ++ GDFN + +                    D  +  +        F  +      
Sbjct: 545 QIPILVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRDRLYGNLTRQGMTHPFTLKSAYSAI 604

Query: 246 ----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISI 300
                 N        IDY     N  +        +  Y +           SDH  +  
Sbjct: 605 GELSFTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMA 664

Query: 301 DYD 303
           ++ 
Sbjct: 665 EFS 667


>gi|114046513|ref|YP_737063.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-7]
 gi|113887955|gb|ABI42006.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-7]
          Length = 377

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/365 (9%), Positives = 83/365 (22%), Gaps = 78/365 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFL 71
               +    +++ + N+    E            S  +         +       DIV  
Sbjct: 10  SSANTTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLDQHHPDIVGF 69

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQSY 128
           QE+ S   + ++         ++                  A+A R   + V     + +
Sbjct: 70  QEVFSPEPLRQLA-LQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPEVH 128

Query: 129 PLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFL----------------- 170
            +     S   + +R+ +   V +          +H KS                     
Sbjct: 129 LVAAMGLSSEFSFSRKVLRATVAVPQIGPCDCYVVHFKSKRPGLALEPHPMGLSLNAPSD 188

Query: 171 ----------DSLENTYSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRK----- 214
                              S      +A  L    + +++ +  P ++ GDFN       
Sbjct: 189 LKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKHPVILMGDFNDSLSLGA 248

Query: 215 ----------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN------------------ 246
                     ++           +        F   +                       
Sbjct: 249 LDALTLQGEALHSNDIKAAGLGHLSDVMLAQVFAHYRLQDAYELFIEANLADNAAHYREH 308

Query: 247 ---ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCP 297
               +        +DY ++         +     + Y   D         R    +DH P
Sbjct: 309 RAPTHYYGPKGSVLDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAP 368

Query: 298 ISIDY 302
           + ++ 
Sbjct: 369 VMVEL 373


>gi|312951002|ref|ZP_07769910.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0102]
 gi|310630957|gb|EFQ14240.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0102]
 gi|315154039|gb|EFT98055.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0031]
          Length = 254

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 83/287 (28%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+    ++  +         AI   ++ ++ +   Y  L            
Sbjct: 54  A--------YTIFTCLSAEREGDGQGEGLAILYNEQKIQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           +      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 EY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|269795838|ref|YP_003315293.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542]
 gi|269098023|gb|ACZ22459.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542]
          Length = 657

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 73/287 (25%), Gaps = 50/287 (17%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A     + L+ WN++     +              D   +     +  A +V LQE+  
Sbjct: 415 PAPSEGTITLLDWNLHYGVSPDPG-----------VDLDEIVDVVASSGAQVVTLQEVSR 463

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              +       T+      +RL   S      D      V   +                
Sbjct: 464 GWVMGGGADMATYL----EQRLGMRSVFVPAADRQFGNMVLWDDALGDGTDVARTALPYG 519

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R AV + ++++G  + V  +HL+            + +      Q   L   + 
Sbjct: 520 AG-PQRRSAVSVTLDLDGTPLRVTSLHLQH----------RAGNIDTRLDQITAL---LD 565

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               S    V AGD N +  +          ++    +       D       +      
Sbjct: 566 ADPVSGARVV-AGDLNAEPGWPEV-----ALLESAGLVSAVDSAGDPDVTTFPSDVPTER 619

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ID+          +       +   +          SDH P+     
Sbjct: 620 IDWVF-----GDGVTFSDIEVLDTRQ----------SDHRPVVTTVS 651


>gi|256380462|ref|YP_003104122.1| exodeoxyribonuclease III Xth [Actinosynnema mirum DSM 43827]
 gi|255924765|gb|ACU40276.1| exodeoxyribonuclease III Xth [Actinosynnema mirum DSM 43827]
          Length = 264

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 80/305 (26%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           + + + N+N L                        ++     AD+V LQE+ +       
Sbjct: 2   LTVSTVNVNGLRAAAKKGY---------------LEWLAATGADVVCLQEVRAEPGQLAD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     W   ++           S     + +AV  +      +    +   +   R  
Sbjct: 47  EVRDPEGWHSAHA----------HSAVKGRSGVAVLTREQPTAVRVGFGVEEFEHSGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 + VE+ G  + V  ++L S       ++      +        L++   +    
Sbjct: 95  -----YVEVELTG--LVVGSLYLPSGEVGTERQDEKDRFMAAFLPYLVELRE---KAAAD 144

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N                          +  ++  +               
Sbjct: 145 GREVLVCGDWNIAHRQADLKSWKTNQKSAGFLPYEREWLGSVFESGYTDVVRALHPDVEG 204

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY V  +                  +   +  +R SDH P
Sbjct: 205 PYSWWSYRGKAFDNDSGWRIDYQVASEGLAARA-------ETAVVERAATYAERWSDHAP 257

Query: 298 ISIDY 302
           ++++Y
Sbjct: 258 VTVEY 262


>gi|261362108|gb|ACX71488.1| sphingomyelinase [Bacillus thuringiensis]
          Length = 225

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 21/208 (10%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S+      +A+  K     + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QY-VFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNR 213
           Q + ++D+I  +   +    +I GD N 
Sbjct: 198 QLKEIQDFIKNKNIPNXEYVLIGGDMNV 225


>gi|189025772|ref|YP_001933544.1| hypothetical protein TPASS_0544 [Treponema pallidum subsp. pallidum
           SS14]
 gi|189018347|gb|ACD70965.1| hypothetical protein TPASS_0544 [Treponema pallidum subsp. pallidum
           SS14]
          Length = 624

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/353 (10%), Positives = 88/353 (24%), Gaps = 81/353 (22%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V      A+ + + S+N+   S             R            K    D++ L E
Sbjct: 291 VSTIQFNARFLNIASYNVENFSAGNKAD-----SARARVFAKHFVNDLKA--PDVICLVE 343

Query: 74  MGSYNAVAK---------------------------VFPKNTWCIFYSTERLINHSKRDS 106
           +   +   K                               +      +  + ++      
Sbjct: 344 IQDDDGAKKHHHCTSAQHTLDLLVRAMAEFSAVRYKAVNIDPQDNAPAGVQSLDADGGQP 403

Query: 107 NNDIHTAIAVRKKNVRVLQ------------------------QSYPLLGAKDSFSRAGN 142
             +I      R   V+++Q                           P        S    
Sbjct: 404 GGNIRCCYLYRTDRVQLVQDQTGSAGTGTFHSVAQMVRGGRQMVKNPARIGVGQESFQNT 463

Query: 143 RRAVELLVEI-----NGKKIWVLDIHLKSFCFLDSLENTYSPSC------SLLSQQAQWL 191
           R+++    +       GK   V+  H  S    D +  +  P+        +        
Sbjct: 464 RKSLVAHFQFVSGVNKGKDFVVVTNHFSSKRGDDPVWGSTQPAQEHSKRKRIQQAAQVAA 523

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                +++ + +P V+AGDFN             +               ++        
Sbjct: 524 FVAALRRERADLPVVVAGDFNDFWFSDVI-----QKFTAVGMHSALDLLPETERYTYVYR 578

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +D  +        +   + +  + + +  +   +R+SDH P+ +   +
Sbjct: 579 GYSQTLDNIL-------SVGARTETADILHINAEQPARERVSDHDPVFVQLSW 624


>gi|332828520|gb|EGK01220.1| hypothetical protein HMPREF9455_02412 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 258

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 79/301 (26%), Gaps = 54/301 (17%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            + AL+  L           RL+++N     +    S                    KN 
Sbjct: 9   IICALLGLLTNGVLMAQTSFRLMNFNTRMSGQMVNYSAKPF------------ATLIKNY 56

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRV 123
           + D V LQE+  +        K+      +   + +              +A+  K    
Sbjct: 57  NPDFVILQEVDYFTVRNG--GKDFTTELAAEMGMFSAFGPAIVYQQGEYGVAILSKYPIQ 114

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              + PL  +         R  + + V + G    V           D+          +
Sbjct: 115 KISNNPLTSSS--ADMKEKRTVLYIDVILPGSNEKVRVAATHLDHSTDN----------V 162

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
               A+ L  +I     +  P ++AGDFN K                 ++   FP     
Sbjct: 163 RLDMARQLDSYI----GNSFPTILAGDFNAKPGENAIVQGMSNWQRICNNFPTFPAI--- 215

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        IDY          +                 +   +SDHC +  D +
Sbjct: 216 ---------PTSKIDYIFAKPTGKWTVKSYEIL-----------KETGISDHCALVTDVE 255

Query: 304 F 304
           +
Sbjct: 256 Y 256


>gi|255976087|ref|ZP_05426673.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T2]
 gi|307279055|ref|ZP_07560113.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0860]
 gi|255968959|gb|EET99581.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T2]
 gi|306504180|gb|EFM73392.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0860]
          Length = 254

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 85/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     + Q     D  +  +QE+         
Sbjct: 1   MKIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
                    Y+T   ++  +  +      AI   ++ ++ +   Y  L            
Sbjct: 54  A--------YTTFTCLSAEREGNGQGEGLAILYNEQKIQAIDTGYFWLSETPQQPSIHPE 105

Query: 139 RAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+  L +         V+++HL           +     + ++   + L D I 
Sbjct: 106 AGCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGMTVILEELHDKIA 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNK 254
           Q      P ++ GDFN + +    +    K      N +    P+         K     
Sbjct: 158 QY-----PTLLMGDFNAE-SEEAVHQLVQKKFQDSKNLATHYGPRGTFQNFIYTKPWAEL 211

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             IDY  +          + +             G+  SDH P+  +
Sbjct: 212 EEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|33592450|ref|NP_880094.1| hypothetical protein BP1340 [Bordetella pertussis Tohama I]
 gi|33601810|ref|NP_889370.1| hypothetical protein BB2834 [Bordetella bronchiseptica RB50]
 gi|33572096|emb|CAE41632.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|33576247|emb|CAE33326.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
 gi|332381866|gb|AEE66713.1| hypothetical protein BPTD_1326 [Bordetella pertussis CS]
          Length = 252

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 82/292 (28%), Gaps = 48/292 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74
                ++R+++ N +                        LR+  +    D+VFLQE+   
Sbjct: 2   PPEPIRLRILTVNAHKGFTSFNRRF----------ILHELREALREARPDLVFLQEVLGE 51

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131
              + A    +P  +   F +      ++        D H   AV  K   V  ++  L 
Sbjct: 52  HQRHAARHARWPAVSQYEFLADTLWSAYAYGRNAVYPDGHHGNAVLSKYPIVSHRNEDLS 111

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                      R  +  ++++      +  + +                 +   +Q + L
Sbjct: 112 VGA----AHEPRGMLHCVLDVRDAPAPLHALCVHLGLR-----------EAHRQEQLRRL 156

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             ++ Q   +    ++AGDFN              T+                       
Sbjct: 157 CQYLRQHVPAQAAALLAGDFNDWRQRAD------ATLARCGLADVHRLALGHAARTFPAA 210

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              + +D   +   A     + S           +    RLSDH P++ +  
Sbjct: 211 CPLLRLDRIYVRNVAGSEPRRLS-----------RRPWSRLSDHVPLAAEVT 251


>gi|88799498|ref|ZP_01115075.1| hypothetical protein MED297_03917 [Reinekea sp. MED297]
 gi|88777808|gb|EAR09006.1| hypothetical protein MED297_03917 [Reinekea sp. MED297]
          Length = 280

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 97/315 (30%), Gaps = 48/315 (15%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           M+R   +++V  L+ C  ++A   +R+ S NI+         L  N      +    +  
Sbjct: 1   MVRLLSVSVVLSLLLCATALAGTPLRVASHNIHY-------ILPNNPDDDWETRRDAVIA 53

Query: 60  YAKNLDADIVFLQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVR 117
              ++ ADI+  QEM S+   V     +  W + +  +        +++    T  I  R
Sbjct: 54  VIDDMAADILAFQEMESFVGGVNHQNLQLDWVLEHHPDYNAGAFSDNADQFPITQPILYR 113

Query: 118 KKNVRVLQ------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
           +    +           P +     +          + +  +     +   +  +     
Sbjct: 114 RDRFSLQTQGFFFFSETPDVIYSRQWDGRYPYFVSWVELFDHTNDRNLFVFNFHNDFASR 173

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--DFWKTID 229
           S     S   +   +Q                P ++ GDFN  + +            I 
Sbjct: 174 SNRRQSSELTAERIEQIA-----------GETPVILLGDFNAPVWFREVERFEPKLTPIK 222

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           P  S  R    K               ID+ ++  +          ++      D +  G
Sbjct: 223 PGGSTNRILGLKLLPA-----------IDHILISDDF--------VADTDVQVWDRRYGG 263

Query: 290 KRLSDHCPISIDYDF 304
           +  SDH PIS D  F
Sbjct: 264 EYPSDHFPISADIRF 278


>gi|269798609|ref|YP_003312509.1| exodeoxyribonuclease III Xth [Veillonella parvula DSM 2008]
 gi|282849823|ref|ZP_06259207.1| exodeoxyribonuclease III [Veillonella parvula ATCC 17745]
 gi|294792738|ref|ZP_06757885.1| exodeoxyribonuclease III [Veillonella sp. 6_1_27]
 gi|269095238|gb|ACZ25229.1| exodeoxyribonuclease III Xth [Veillonella parvula DSM 2008]
 gi|282580760|gb|EFB86159.1| exodeoxyribonuclease III [Veillonella parvula ATCC 17745]
 gi|294456637|gb|EFG25000.1| exodeoxyribonuclease III [Veillonella sp. 6_1_27]
          Length = 251

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 73/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L         ++                  LDADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVTKGFMES---------------FNELDADIFCLQETKLQPD-QIS 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++++     +          +  AV  +   +   +   +   D   R    
Sbjct: 45  LELPGYEQYWNSAVKKGY----------SGTAVFTRIKPLSVTNGIGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       +++  +  +     +  +               L        +   
Sbjct: 91  -----VITAEYDNFYLVCCYTPNSQRELARLDYRMTWEDAFRNYLLEL--------DKKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                              +        F           
Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKMTELLGAGFTDTFRHLYPDAIEQY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  +     + +    + ++            SDHCP+ 
Sbjct: 198 SWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIF-----------GSDHCPVE 246

Query: 300 IDYD 303
           +  D
Sbjct: 247 LVID 250


>gi|1197173|dbj|BAA11841.1| deoxyribonuclease I precursor [Homo sapiens]
          Length = 282

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 30/283 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E               +  + + Q       DI  +QE+   +  AV
Sbjct: 22  SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+          +   +++     ++         R   V  +   Y   G +   +  
Sbjct: 71  GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            NR    +       ++    I        D++    +     L  Q +W          
Sbjct: 131 FNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW---------- 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            L   ++ GDFN   +Y+  +      +  + +      +         +       D  
Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAY----DRI 236

Query: 261 VMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300
           V+     +  ++ +S     +      S    + +SDH P+ +
Sbjct: 237 VVAGMLLQGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 279


>gi|297581461|ref|ZP_06943384.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534299|gb|EFH73137.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 869

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 89/373 (23%), Gaps = 91/373 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  ++          +      LDADIV L E
Sbjct: 473 GDLRIATFNVLNYFNSPFGGDANQHGDSRGANNLAEFEVQQAKIVNAIVRLDADIVGLME 532

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------------IHTAIAV 116
           + +                 S         R    D                 I T +  
Sbjct: 533 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 592

Query: 117 RKKNVRVLQQSYPLLGAK------------DSFSRAGNRRAVELLVEINGK--KIWVLDI 162
           R K V++ Q     + ++                +   R  +    ++ G   KI V   
Sbjct: 593 RDKVVKLAQNHVIPMPSQQAPEVIDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVN 652

Query: 163 HLKSF----CFLDSLENTYSPSCSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDF 211
           H KS         +       +   L  Q                   +     VI GD 
Sbjct: 653 HFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDM 712

Query: 212 NRKINYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
           N                                      D    I  +   +     K  
Sbjct: 713 NSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGVEQFGDSGAEIKHSYGYLNAVAMKHP 772

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------K 290
              +         +D+ ++  +    ++  +   I   E  +                  
Sbjct: 773 DSWSYSFNDEVGALDHLLISPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQF 832

Query: 291 RLSDHCPISIDYD 303
           R SDH P  ++ +
Sbjct: 833 RASDHDPAVLELN 845


>gi|312892184|ref|ZP_07751681.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM
           18603]
 gi|311295314|gb|EFQ72486.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM
           18603]
          Length = 369

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 87/305 (28%), Gaps = 62/305 (20%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  +++R++++N+++ S            +   S    +    +    D + ++E  S+ 
Sbjct: 103 ARPEQIRMMAYNVHSFSN----------AQTNASSAQQIVSLVREQQPDFINMEEFYSFA 152

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                   +      +                   +A+  K   + Q    L        
Sbjct: 153 KGKFAMCDSIKAALQTPYYFYQPFSGTLAAGG--GLAIFSKFPIIHQGVIRLTQDYSDTK 210

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN---------------------TY 177
                 A+ + V+ + K   V  +HL+SF                               
Sbjct: 211 ------AIFIDVKKDDKIFRVYCVHLQSFLLTAEDHVYMDSVSQKGKTNIRSSKRIVSKL 264

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +    S Q   +KD + Q      P+++AGDFN   +    N               F
Sbjct: 265 KAAFIHRSAQVTMMKDHMAQCP---YPYIVAGDFNDTPSSYAVNQM------SKGIKNAF 315

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            ++                IDY ++                 ++  +     K+LSDH P
Sbjct: 316 REKGRGLGRTYNGDIPNYQIDYILVSPQ--------------FDVLNYTVIEKKLSDHYP 361

Query: 298 ISIDY 302
           I  D 
Sbjct: 362 IRSDL 366


>gi|281423696|ref|ZP_06254609.1| exodeoxyribonuclease III [Prevotella oris F0302]
 gi|281402248|gb|EFB33079.1| exodeoxyribonuclease III [Prevotella oris F0302]
          Length = 250

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 83/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G                   Q  + L+AD   LQE     A    
Sbjct: 1   MKFISWNVNGLRACVGKDF---------------SQSFETLNADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  +   +       +   D   R    
Sbjct: 45  LQFPGYTSYWN----------YADKKGYSGTAIYARKEPIAVTYGIGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                         + ++  + +   
Sbjct: 91  -----VITLEYDNFFLVTVYTPN-------AQDGLRRLDYRMTWEDDFQAYL-HRLDEQK 137

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                         D   + +    +        +    +
Sbjct: 138 PVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEERDKMTQLLSHGFTDTFRTLYPEQVTYS 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R +         IDYF++       L   S    ++            SDHCPI +
Sbjct: 198 WWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIHTEIF-----------GSDHCPIEV 246

Query: 301 DYD 303
           D +
Sbjct: 247 DLE 249


>gi|253997612|ref|YP_003049676.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8]
 gi|253984291|gb|ACT49149.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8]
          Length = 256

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 80/307 (26%), Gaps = 80/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           ++++S N+N +                      L  + KN DAD++ +QE+ +       
Sbjct: 1   MKIISLNLNGIRSATNKG---------------LYAWLKNQDADVICMQELKAQAGDMTE 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  ++       +S     +       +               G       + 
Sbjct: 46  QMLNPEGYYGYFHYAEKKGYSGVGIYSKTKADSVI--------------EGLGIEDIDSE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +E     + V+ ++L S    +  +            Q   L         S
Sbjct: 92  GRY-----LEARFGNLSVVSLYLPSGSSGEERQAFKFSVMERFMPQLHALVQ-------S 139

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               VI GD+N                             +  D    +  +        
Sbjct: 140 GRDVVICGDWNIAHKEADLKNWKGNRKNSGFLPEERAWLTQLFDDMGWVDVYRTLYPDTT 199

Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +A      N+           IDY +         +  S             + +R SDH
Sbjct: 200 DACYTWWSNRGQAWANNVGWRIDYQIATPAFAAKAVSTSV-----------YKDERFSDH 248

Query: 296 CPISIDY 302
            P+ IDY
Sbjct: 249 APLIIDY 255


>gi|124514320|gb|EAY55834.1| Exodeoxyribonuclease III [Leptospirillum rubarum]
          Length = 265

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 74/301 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +  +WN+N+L                      +  +     AD+V LQE    +A    
Sbjct: 11  FKATTWNVNSL----------------KVRLPQVLDWLLREKADVVCLQETKLPDA---- 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   R I +    S    +  +A+       + ++       D       R
Sbjct: 51  ------QFPFQAFREIGYDAVWSGQPTYNGVAILSNTPIEMTETSMDDHPDDH------R 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   V    + + ++++++ +   LDS +  Y        +    L  +I + + +  
Sbjct: 99  RFLSARV----RGVRIVNVYVPNGQDLDSPKFAYK------LEWLNRLTRYIEKVRAAPD 148

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GDFN                   +     +    I        +      R    
Sbjct: 149 PVLLMGDFNIVPGDLDTWDPAGFKDQIFHSPPERNALGNIFRTGFADLYRTLYPDRQE-F 207

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                ++          ID  +      +   +          D    + +R SDH P++
Sbjct: 208 SWWDYRMGSFHRNRGLRIDLILSTPPLSEQCQEVFI-------DREARKAERPSDHVPVT 260

Query: 300 I 300
            
Sbjct: 261 A 261


>gi|13162337|ref|NP_077062.1| DNA-(apurinic or apyrimidinic site) lyase [Rattus norvegicus]
 gi|1168468|sp|P43138|APEX1_RAT RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|11878235|gb|AAG40859.1|AF309114_1 nuclease APEX [Rattus norvegicus]
 gi|624915|dbj|BAA07938.1| APEX nuclease [Rattus norvegicus]
 gi|5360709|dbj|BAA82124.1| Apex nuclease [Rattus norvegicus]
 gi|50926078|gb|AAH78816.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Rattus
           norvegicus]
 gi|149033628|gb|EDL88426.1| apurinic/apyrimidinic endonuclease 1, isoform CRA_a [Rattus
           norvegicus]
          Length = 317

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 52  TSASGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 96

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                      K    +         +    S+ + ++ + +  +   +        G  
Sbjct: 97  KCSE------NKLPAELQELPGLTHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 146

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V        +   ++  ++ +                   +  + L   
Sbjct: 147 EEEHDQEGRVIVA-----EFESFILVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKDLA-- 199

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 200 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGEMLQAVPLADSFR 253

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 254 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 304

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 305 --GSDHCPITL 313


>gi|323465631|gb|ADX69318.1| Exodeoxyribonuclease A [Lactobacillus helveticus H10]
          Length = 284

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 81/307 (26%), Gaps = 59/307 (19%)

Query: 25  RLV---SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +++   SWNI++L+     +  +    R       +      L+ DI+ +QE        
Sbjct: 8   KIMILISWNIDSLNAALTGTSARAEETRG------VLDKIHALNPDIIAIQETKLRATGP 61

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +      +     +  S  +     +       K       S P +GA +     G
Sbjct: 62  TKKHQTILAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPAVSKPAIGAPEPMDEEG 121

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++ +   K +V  ++  +                   +  + L +        
Sbjct: 122 R------IITLEFDKYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNE-------- 167

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P + +GD+N                           +  +        F K   +   
Sbjct: 168 KKPVLASGDYNCAHTEIDLKHPENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEG 227

Query: 247 ANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            IDY+++       +++    +                DHC
Sbjct: 228 VYSWWAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHC 276

Query: 297 PISIDYD 303
           PI ++ +
Sbjct: 277 PILLEIN 283


>gi|294827777|ref|NP_711208.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai
           str. 56601]
 gi|293385622|gb|AAN48226.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 567

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 26/302 (8%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P ++S    ++++S +I        +S W +  +   +       Y K  + DI+  + +
Sbjct: 85  PNSSSADIGIKILSHSI--FMAPTNLSSWGDLGQEERAQRIASSSYIK--NQDIIVFEGL 140

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQ 126
              NA   +  K      Y T  +    K  +               + +  K     + 
Sbjct: 141 SHNNAEKILLEKIRSEYPYQTNVVGRTKKGWNATLGAYTTSPMANGGVIIVSKWPIEEKV 200

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y    +     +  N+    + +  +GKK  V+   L++          ++   ++   
Sbjct: 201 QYIFNNSNCGQDQYYNKGFAYVKINKDGKKFHVIGTQLQAREPDC-----FNSGETIRKL 255

Query: 187 QAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           Q   +K +I  +        +I GD N         D   K        +  P   D++ 
Sbjct: 256 QLNDIKSFIDSKDIPKDETVLITGDLNIIKGSNEYFDMISKLNVNEPRYVGVPFTLDTKT 315

Query: 246 NANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCP 297
           NA           I +DY ++ +   +  + ++ +    +    K          SD  P
Sbjct: 316 NALAAYYYEKEKPIYLDYILVSKLHAQPPVWQNLAYDPISNTTWKRSDGYTSYEFSDRYP 375

Query: 298 IS 299
           + 
Sbjct: 376 VY 377


>gi|167772884|ref|ZP_02444937.1| hypothetical protein ANACOL_04272 [Anaerotruncus colihominis DSM
           17241]
 gi|167664817|gb|EDS08947.1| hypothetical protein ANACOL_04272 [Anaerotruncus colihominis DSM
           17241]
          Length = 300

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 91/292 (31%), Gaps = 40/292 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +R+VS+N+     +    +  N   +      L  Q+ +   A IV +QE+     + V+
Sbjct: 32  IRVVSFNL-----KRDFGIALNRSHKWGQRRALAAQFIRESGATIVGVQELLPNMRDDVS 86

Query: 82  KVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           ++   +   + +         S   S+  I    A  +          P      ++   
Sbjct: 87  RLLDVDYSVLGFGRFSGAKPNSDEHSDIIIKNDNASVRLIKTFWLSKSPER-LSRAYFAV 145

Query: 141 GNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             R      V +    + + V + HL   C +              +   + + D++   
Sbjct: 146 FPRICTVAEVYLTKLDRCVRVFNTHLDHICGI------------ARTLGIRVILDYMRSF 193

Query: 199 KES-LVPFVIAGDFNRKINYLGNN-----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
            E   +P ++ GDFN K             D +  +   D   RFP   ++  +      
Sbjct: 194 NEERPMPTILMGDFNAKPTSRPVRLLRACSDEYPQLHLTDVYTRFPAHINNTLHNFSGRV 253

Query: 253 NK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                PIDY  +            F  +  +       G   SDH P+    
Sbjct: 254 RPGAQPIDYIFVSDE---------FEIVEAHIMTDPVDGHYPSDHYPLEATL 296


>gi|77360643|ref|YP_340218.1| hypothetical protein PSHAa1702 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875554|emb|CAI86775.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 386

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/384 (10%), Positives = 95/384 (24%), Gaps = 91/384 (23%)

Query: 10  VFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYA 61
           +F ++ CTA         ++++ ++N+    E            + ++       +  Y 
Sbjct: 1   MFVILKCTAVEPLLIKNTQLKIATFNLFNYLEPPNAYYEFEKIYTAQQWAKKQQWIIDYL 60

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                D++  QE+ S  ++ ++     +   ++                  AIA +   V
Sbjct: 61  TEHAPDVIGFQEVFSIESLQELVRGQGYE-HFAVVDTPEVIDDFIYKRPVVAIAAKYPIV 119

Query: 122 RVLQQSYP---LLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLEN 175
            V    +    +     S     +R+ +   V    I     +V+    K         N
Sbjct: 120 EVAAVQHDNELVATLGLSADFTFSRKVLRATVTLPHIGNTDCYVVHFKSKRPMIEVDEHN 179

Query: 176 TYSPSCSLLSQQAQW-------------------LKDWITQKKESLVPFVIAGDFNRKIN 216
                   + +  +                    +   I +++ +  P ++ GDFN  I 
Sbjct: 180 KALSPEKNIIEILKANVAGGWGSTIQRGSEATLLMIQMIARREATQQPMILMGDFNNSIA 239

Query: 217 YLGNNDDFWKTID----------------------------------------------- 229
               +     T+                                                
Sbjct: 240 DGVLSHMLTNTLRFAPAFDAKTYLAKYCLNDAWDLFTKSQLASAESQAPTDDLRVDGHIA 299

Query: 230 ----PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD- 284
                        K    R   +    +   +DY ++            F    YN  D 
Sbjct: 300 SVVIEQGDANNVAKPATPRTPTHYYGASSSVLDYILLSSEFDASYHDSFFEVSDYNTYDR 359

Query: 285 -----IKSRGKRLSDHCPISIDYD 303
                +  R    +DH  + +   
Sbjct: 360 HLINPVFERDDLSTDHGVVIVSLT 383


>gi|315056461|ref|XP_003177605.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           protein [Arthroderma gypseum CBS 118893]
 gi|311339451|gb|EFQ98653.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           protein [Arthroderma gypseum CBS 118893]
          Length = 801

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/360 (11%), Positives = 92/360 (25%), Gaps = 78/360 (21%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K  ++++N   +  +  +      +          LL    +  DADIV LQE+   + 
Sbjct: 416 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 475

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAK- 134
                 +  +  +         ++  +  +       A   +     +L+++    G   
Sbjct: 476 HGFFREQLAYNDYKGVYWPKGRAQGMNEEEAKVVDGCATFFKGSKFILLEKAMIHFGQTA 535

Query: 135 ----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                     D ++R   +  + ++V     ++G++I V++ H+        ++   S  
Sbjct: 536 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVNAHIYWDPAYKDVKLVQSAI 595

Query: 181 CSLLSQQAQWLKDWITQKKESLV------------------------------------P 204
                 Q       I    +                                       P
Sbjct: 596 MMEEVTQLAEKFIKIPACTDKTAFRFSEPEDETNNNENASPPTPVEPSPSVEYSSPSQIP 655

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC---- 245
            ++ GDFN + +                    +  +  +        F  +         
Sbjct: 656 TLVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRNRLYGNLTRQGMTHPFTLKSAYSAIGEL 715

Query: 246 -NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDYD 303
              N        IDY     N  +        +  Y             SDH  +  ++ 
Sbjct: 716 SFTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMAEFS 775


>gi|294794491|ref|ZP_06759627.1| exodeoxyribonuclease III [Veillonella sp. 3_1_44]
 gi|294454821|gb|EFG23194.1| exodeoxyribonuclease III [Veillonella sp. 3_1_44]
          Length = 251

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 73/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L         ++                  LDADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVTKGFMES---------------FNELDADIFCLQETKLQPD-QIS 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++++     +          +  AV  +   +   +   +   D   R    
Sbjct: 45  LELPGYEQYWNSAVKKGY----------SGTAVFTRIKPLSVTNGIGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       +++  +  +     +  +               L        +   
Sbjct: 91  -----VITAEYDNFYLVCCYTPNSQRELARLDYRMTWEDAFRNYLLEL--------DKKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                              +        F           
Sbjct: 138 PVILCGDLNVAHQEIDLKNPKMNRKNAGFSDEERAKMTELLGAGFTDTFRHLYPDAIEQY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  +     + +    + ++            SDHCP+ 
Sbjct: 198 SWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIF-----------GSDHCPVE 246

Query: 300 IDYD 303
           +  D
Sbjct: 247 LVID 250


>gi|271500992|ref|YP_003334017.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586]
 gi|270344547|gb|ACZ77312.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586]
          Length = 256

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 81/293 (27%), Gaps = 49/293 (16%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             + +     +++ N +             S          LR   +++ ADIV LQE+ 
Sbjct: 5   SQSPLGISFTVLTINTH----------KGFSALNRRFILPELRDAVRSVSADIVCLQEVL 54

Query: 76  SYNAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYP 129
             ++   +    +P      F +     +++        +     AV         ++  
Sbjct: 55  GRHSTHPLQVEHWPDTPHYEFLAETMWNDYAYGRNAIYPEGDHGNAVLSHFPIFSYRNLD 114

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +     S S    R  +  ++++  + + +  + +                 S   QQ  
Sbjct: 115 V-----SVSDKAKRGILHCVLKVPNRDVHIHVVCVHLGLT-----------ASHRRQQLS 158

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L D +     +  P ++AGDFN                        F +          
Sbjct: 159 LLCDLLAT-LPADAPLIVAGDFNDWQM-----KASAILKRRAGLEEVFSQHFGKPPRTFP 212

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +D   +                   +         LSDH P++++ 
Sbjct: 213 ARFPLLRLDRIYVRNAK-----------TSVPKLLPSKPWAHLSDHAPLAVEI 254


>gi|218130897|ref|ZP_03459701.1| hypothetical protein BACEGG_02492 [Bacteroides eggerthii DSM 20697]
 gi|217987241|gb|EEC53572.1| hypothetical protein BACEGG_02492 [Bacteroides eggerthii DSM 20697]
          Length = 254

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 85/302 (28%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L                 +    L ++  N   D++ LQE          
Sbjct: 1   MKIITYNVNGLRA---------------AVTKGLPEWLANEQPDVLCLQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +           H    +    ++ +A+  K        +   G       +  R
Sbjct: 38  LQPEQYPAEALDALGYKHYLYSARKKGYSGVAILTKREP----DHVEYGMGMEEYDSEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + ++ ++  S    D  +       +      +  + ++ + + +  
Sbjct: 94  F-----MRADYGDLSIVSVYHPSGTSGDERQ-------AFKMVWLEKFRQYVVELQRTRP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  +D                W T   N+  I   +          
Sbjct: 142 KLILCGDYNICHEAIDIHDPVRNATNSGFLPEEREWMTRFLNEGFIDTFRLLHPDKQEYT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++++     L          +           SDHCP+ +
Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVNEPVRPMLKDARILNDAVH-----------SDHCPMML 250

Query: 301 DY 302
           + 
Sbjct: 251 EI 252


>gi|120612934|ref|YP_972612.1| endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1]
 gi|120591398|gb|ABM34838.1| Endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1]
          Length = 259

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 83/291 (28%), Gaps = 49/291 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +      ++++ N++                        LR+  + + ADIVFLQE+   
Sbjct: 10  SPAPIAFKVLTVNVHKGFTSFNRRFM----------LHELREAVRGVSADIVFLQEVLGT 59

Query: 78  NAVA----KVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +         FP+     F +      ++       ++ H   A+  K   V  +++ + 
Sbjct: 60  HQRHANRVANFPQEPHYEFLADTIWGQYAYGRNAVYDNGHHGNALLSKFPIVHYENHDIS 119

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +         R  +  +++  G    V  I +                 +   +Q + +
Sbjct: 120 VSG-----PERRGMLHCVLQPPGHDRQVHAICVHLGL-----------QEAHRQRQLRRV 163

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            D +        P ++AGDFN                        F              
Sbjct: 164 CDLVNTF-PGDDPVIVAGDFNDWRGRAHE-----VLRKGAGLHEVFVHAGGRAVRTFPAS 217

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + +D   +   +           +       +    +LSDH P++ + 
Sbjct: 218 MPLLALDRIYVRNAS-----------VHAPVVLPRKPWHKLSDHAPLAAEI 257


>gi|20808602|ref|NP_623773.1| exonuclease III [Thermoanaerobacter tengcongensis MB4]
 gi|20517232|gb|AAM25377.1| Exonuclease III [Thermoanaerobacter tengcongensis MB4]
          Length = 258

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 81/301 (26%), Gaps = 75/301 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L                         Y K +DADI  +QE         +
Sbjct: 1   MKLVSWNVNGLRACLQKGFM---------------DYFKAIDADIFCIQETKLQENQKDI 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    +             +    ++  AV  K   +           D   R    
Sbjct: 46  EGLDLNGYYAFWN--------FAEKKGYSGTAVFTKYKPLSVSYGIGTPHHDKEGR---- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  KK ++++ +  +     +  N               L        +S+ 
Sbjct: 94  -----VITLEYKKFFLVNAYTPNSQRGLTRLNYRMEWEEDFRSYLLKL--------DSVK 140

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +  +  +  F      + +A 
Sbjct: 141 PVILCGDLNVAHQEIDIKNPAANRRNAGFTDEEREKMTILLNSGFIDTFRYFYPDKKDAY 200

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            +DYF++ +    +LI       +             SDHCP+ 
Sbjct: 201 TWWSYMHNAREKNIGWRVDYFIVSERLKDYLIDSQIHSEV-----------MGSDHCPVV 249

Query: 300 I 300
           +
Sbjct: 250 L 250


>gi|330986335|gb|EGH84438.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 233

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 78/256 (30%), Gaps = 41/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSN 107
              LR+  + + ADIVFLQE+     S+    K +P  +   F +     +  + +    
Sbjct: 12  LPELREAVRTVSADIVFLQEVHGEHQSHARSVKDWPTISQYEFLADSMWNDFAYGRNAVY 71

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            D     A+  K   +  ++  +     S      R  +  ++E+      V  + +   
Sbjct: 72  PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILEVPYAG-RVHAVCVHLG 125

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         S   QQ   L + + +      P ++AGDFN               
Sbjct: 126 LR-----------ESHRRQQLNLLAELMER-LPEGEPVIVAGDFNDWRQRAD------AL 167

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           ++       F +   +   +       + +D   +           S             
Sbjct: 168 LEGTGLHEVFVERFGAPAKSFPARWPLLRLDRIYVRNATSHRPKVLS-----------SR 216

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P++++  
Sbjct: 217 PWSHLSDHAPLAVELT 232


>gi|297680661|ref|XP_002818101.1| PREDICTED: endonuclease/exonuclease/phosphatase family
           domain-containing protein 1-like isoform 1 [Pongo
           abelii]
 gi|297680663|ref|XP_002818102.1| PREDICTED: endonuclease/exonuclease/phosphatase family
           domain-containing protein 1-like isoform 2 [Pongo
           abelii]
          Length = 569

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 78/296 (26%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKK-NVRVLQQSYPL 130
             +       +  +                         +          V +       
Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGVELRDAGSQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +   L S   + + S          
Sbjct: 372 SSPSNGHGKLAGPSPYLARFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +    +      I   +              + KN
Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  + 
Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538


>gi|329937752|ref|ZP_08287271.1| secreted protein [Streptomyces griseoaurantiacus M045]
 gi|329303151|gb|EGG47039.1| secreted protein [Streptomyces griseoaurantiacus M045]
          Length = 285

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 72/285 (25%), Gaps = 61/285 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-----MGSYNA 79
           R+++WN+    +                    L          +V LQE     +     
Sbjct: 47  RVMTWNLCNPCKSGDAD---------------LAAEIAASAPQVVGLQESCTGQVERIRT 91

Query: 80  VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           + +      + + + +                    A+          +           
Sbjct: 92  LLRNRHGLDYHVEYGTVLHRWGRCGGAPWKPGGYGEAILSAAPMTDAVAVEYPDGG---- 147

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            + +R  + +   + G+++ V + HL                 S+ ++Q   L   + + 
Sbjct: 148 -SEDRGYMAVTTTVGGRELRVFNTHL-----------AERRQESVRAKQVDVLAKVVARY 195

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    V+ GDFN    Y    D  W  +   D            C    +       D
Sbjct: 196 DRA----VVMGDFNAVP-YAAELDAMWPLVKDADPRCGPS--AGGACEPTTDWH--SRFD 246

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y  +        +  S   +  +           SDH  +  D  
Sbjct: 247 YVFLRG------VGASGHRVRASTH---------SDHHMLYADLT 276


>gi|24372731|ref|NP_716773.1| hypothetical protein SO_1148 [Shewanella oneidensis MR-1]
 gi|24346800|gb|AAN54218.1|AE015559_2 hypothetical protein SO_1148 [Shewanella oneidensis MR-1]
          Length = 377

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/356 (10%), Positives = 86/356 (24%), Gaps = 78/356 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +R+ + N+    E            S  +         +       DIV  QE+ S   +
Sbjct: 19  IRIATINLFNFIEPPLAFYDFENIYSHGQWQKKCQWFGELLNQYHPDIVGFQEVFSPEPL 78

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQSYPLLGAKDSF 137
            ++  +      ++                  A+A R   + V     +++ +     S 
Sbjct: 79  KQLTAQQG-LTHFAIVDSATLVSDYIYQSPVVALASRFPILDVHAIEPEAHLVAAMGLSS 137

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFL-------------------------- 170
             + +R+ +   V+I          +H KS                              
Sbjct: 138 QFSFSRKVLRATVDIPQIGACDCYVVHFKSKRPGLALEPHPLGLTLSAPPTLALHSETKL 197

Query: 171 -DSLENTYSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRK-------------- 214
                     S      +A  L    + +++    P ++ GDFN                
Sbjct: 198 LTEQALGRWASTMQRGAEAALLFHAILARRQSRRYPVILMGDFNDSLSMGALDALTLEGE 257

Query: 215 -INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------------------ANKNLR 252
            ++           +     L  F + +                           +    
Sbjct: 258 HLHSKDIKAAGLGHLSDAARLAVFAQYRLQDAYELFVAANMPDNLVHSREHRAATHYYGP 317

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCPISIDY 302
               +DY ++         +     + Y   D         R    +DH P+ ++ 
Sbjct: 318 KGSVLDYILLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVWVEL 373


>gi|313667587|ref|YP_004047871.1| nuclease [Neisseria lactamica ST-640]
 gi|313005049|emb|CBN86481.1| putative nuclease [Neisseria lactamica 020-06]
          Length = 259

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 79/307 (25%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++   +    ++       +S                            +G         
Sbjct: 47  EMKNPHGMHGYWHCAEKRGYSGVAVYGKRKPDNV--------------QIGMGIEEFDRE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V  +  ++ V+ ++L S    +  +        +  +        +   K  
Sbjct: 93  GRF-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLETMKNE 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246
               V+ GD+N     +   +      +                        +       
Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNP 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++        +                + ++ SDH P
Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           + ++YD+
Sbjct: 250 LVVEYDY 256


>gi|312144054|ref|YP_003995500.1| exodeoxyribonuclease III Xth [Halanaerobium sp. 'sapolanicus']
 gi|311904705|gb|ADQ15146.1| exodeoxyribonuclease III Xth [Halanaerobium sp. 'sapolanicus']
          Length = 254

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 87/307 (28%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +R+ SWN+N +                         + +    D++ LQE+         
Sbjct: 1   MRIYSWNVNGIRAVNRKGF---------------LDWIEEEKPDVLALQEIRIQPEQLKD 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+   + +  +++      +          + +A+  K   +       +   D   R  
Sbjct: 46  KLKNIDGYHSYFNYGEKAGY----------SGVAIYSKEEPLDVWKGFGIERFDYEGR-- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++     + ++L+I+  +        N          + A+ L++        
Sbjct: 94  -------VIAAEYPEFYLLNIYFPNGKSSKERLNYKLDFYDATLEYAEELRE-------E 139

Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               V++GD+N   +               +L    ++   ++ +  +  +      +  
Sbjct: 140 GKGVVVSGDYNTAHHPLDLKNPDANKNTSGFLEIEREWLDKLENHGFIDTYRYFYPDKE- 198

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY  + +     L                      SDHCP
Sbjct: 199 TYSWWSYRTRARERNAGWRIDYHFISEELEDNLNHSDILT-----------DVMGSDHCP 247

Query: 298 ISIDYDF 304
           +++D  F
Sbjct: 248 VTVDLKF 254


>gi|51556247|ref|NP_991322.1| endonuclease/exonuclease/phosphatase family domain-containing
           protein 1 [Danio rerio]
 gi|82187405|sp|Q6TEQ0|EEPD1_DANRE RecName: Full=Endonuclease/exonuclease/phosphatase family
           domain-containing protein 1
 gi|37682097|gb|AAQ97975.1| KIAA1706-like protein [Danio rerio]
          Length = 550

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 87/316 (27%), Gaps = 41/316 (12%)

Query: 9   LVFFLVPCTASVAQK------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           LV  + PC    A        VR+ +WN+             +          ++     
Sbjct: 225 LVTSVRPCVEPPAGTRDGKPVVRVATWNLQ---------RCSSEKANNPGVKEVVCMTLL 275

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------HSKRDSNNDI 110
             D  ++ +Q++    A+ K   +       S  R  +             +   ++   
Sbjct: 276 ENDIKLLAVQDLADREALDKFCAELNQPTLCSVRRWKSARGLWKCAVSEKPNGVSNSAPE 335

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
            +       +   ++ S  L     + +   + +       I   ++ ++++ L +    
Sbjct: 336 FSGFLWDCSSGIEMKDSAVLESFTTNGNGNPHPQPYLGHFYIGSSELTLVNVLLTAAPSP 395

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
              +   +       +    L   + +  +     ++ G F    +         + +  
Sbjct: 396 TENKRKSTSDDLKTHK----LSSGVQETLKGERDLLVMGHFGVAPDSSEMEILRKEKLSA 451

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-QESFSEILYNEDDIKSRG 289
             +   F         + +  +    +D     ++  K    Q S          I    
Sbjct: 452 LLAPSVFTNI------STRTPQGSRSLDNIWASRSLRKTYTGQCSVVREGLTNPWIPDNW 505

Query: 290 KR---LSDHCPISIDY 302
                 S+HCP+  ++
Sbjct: 506 SWGGVASEHCPVVAEF 521


>gi|305680645|ref|ZP_07403453.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC
           14266]
 gi|305660176|gb|EFM49675.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC
           14266]
          Length = 298

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 79/304 (25%), Gaps = 67/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +      LD D++ +QE        K 
Sbjct: 1   MRIANWNVN----------------SVRTRVDRIVAALARLDIDVLLVQETKCK---DKQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP + +           +       +    +A+  +      Q+        +      +
Sbjct: 42  FPFDAF---------PGYEIAHHGLNQWNGVAILSRVGLADIQTSFPHQPGFAKDPKKPQ 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---- 199
                 +  +   + V  +++ +   +      Y        +    L   +  +     
Sbjct: 93  NLEARAISADCGGVRVWSLYVPNGRAIADRHYDYK------LRWLDALARHVEDQAGDPE 146

Query: 200 -ESLVPFVIAGDFNRKINYLGNNDDFW---------KTIDPNDSLIRFPKEKDSRCNANK 249
             S  P V+ GDFN         D                    LI       S  +   
Sbjct: 147 QPSSQPLVLGGDFNIAPTDANVWDITAFIDHTHVTEAERQAFAGLIEAGLTVTSPTSGYS 206

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               K         + ID+ +                     D  +  G   SDH P+ +
Sbjct: 207 YWDYKAGRFPKNEGMLIDFQLARG----------LHATGSFIDVAERSGTGASDHAPVVV 256

Query: 301 DYDF 304
           DYD+
Sbjct: 257 DYDY 260


>gi|163739851|ref|ZP_02147258.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107]
 gi|163743404|ref|ZP_02150784.1| exodeoxyribonuclease III, putative [Phaeobacter gallaeciensis 2.10]
 gi|161383398|gb|EDQ07787.1| exodeoxyribonuclease III, putative [Phaeobacter gallaeciensis 2.10]
 gi|161386885|gb|EDQ11247.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107]
          Length = 262

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/307 (8%), Positives = 66/307 (21%), Gaps = 73/307 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       ++ +       D++ LQE  S      
Sbjct: 2   SFTLATWNIN----------------SVRLREPIVCKLLAEEGPDVLCLQECKSPVD--- 42

Query: 83  VFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                   I       + +          +  +A+  +                +     
Sbjct: 43  -------KIPMEQFAELGYGHMVARGQKGYNGVAILSRLPIEDVGDKDFADLGHARH--- 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   +E     + + + ++ +    D  +   +            ++DW   ++  
Sbjct: 93  ----IAGRLENG---VTIHNFYVPAG--GDVPDRAVNEKFGQKLDYLTDMRDWFNAERPE 143

Query: 202 LVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N         D                 +  +          +       
Sbjct: 144 KS--ILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHFADVMDAGGWSDVTRNDIPDGQ 201

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+     +                        ++ SDH 
Sbjct: 202 LYSWWSYRAKDWDAADKGRRLDHIWATPDIKNAAHSS-------RVMRDARGWEKPSDHA 254

Query: 297 PISIDYD 303
           P+   +D
Sbjct: 255 PVFATFD 261


>gi|332525591|ref|ZP_08401746.1| hypothetical protein RBXJA2T_07110 [Rubrivivax benzoatilyticus JA2]
 gi|332109156|gb|EGJ10079.1| hypothetical protein RBXJA2T_07110 [Rubrivivax benzoatilyticus JA2]
          Length = 269

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 84/299 (28%), Gaps = 51/299 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   A+  + +R+ ++NI+           +   +    +   L    ++ DAD+VFLQE
Sbjct: 11  LMPPATGLEALRVATYNIH--------KGVRGVGRGKRLEIHNLGLAVESFDADMVFLQE 62

Query: 74  M------GSYNAVAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           +       S       F                 + +             A+  +     
Sbjct: 63  VRLFNTRESRRFQRTSFGWPEQGQAEFLAPEGYDVAYRTNAITRHGEHGNALLSRWPIGD 122

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
              + +     S  R   R  + + V+  G  +  +  H                  +  
Sbjct: 123 IGHHDV-----SDHRFEQRGLLHVPVQWQGMTVHAVVAHFGLVH-------------ASR 164

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            +Q   L ++I          ++AGDFN     L +                 P+    +
Sbjct: 165 LRQVARLAEFIDATVPPGEMLIVAGDFNDWGERLDSPMATI-----GLQRAFAPESTRQQ 219

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +L     +D F +               +        +   R+SDH P+  + +
Sbjct: 220 RLTFPSLAPVFALDRFYLRG----------LRCVSTMVPRGMA-WARMSDHLPLVAELE 267


>gi|328874296|gb|EGG22662.1| hypothetical protein DFA_04792 [Dictyostelium fasciculatum]
          Length = 552

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 88/326 (26%), Gaps = 70/326 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------- 74
              +L+++NI   ++                   L+    K+   D++ LQE+       
Sbjct: 253 DTFKLMTYNIWNYNKP------------WRIRSKLITDIIKDHQPDVIALQELRYSKWDG 300

Query: 75  -----------GSYNAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNV 121
                         N +  +    ++         +       + +      + +  K+ 
Sbjct: 301 EHYKESPKLMGQERNQIQHIVNLLSFHNLKYNYYYLPSMIYNNEVDGLQMEGLGILSKHP 360

Query: 122 RVLQQSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
            V  +S  L     D  +    R  +   + I+G+ + VL  H                 
Sbjct: 361 IVKIESTKLTNDHIDDTTDTHQRSCLLATINIDGRHLNVLTSHFSLSFQGGQRN------ 414

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR---- 236
                  A  + +W  Q      P ++ GDFN + N         K    +++       
Sbjct: 415 -------AYEIHNWTKQY--DDAPNILVGDFNAEPNSHPIQFLTGKHSIKDNTGDFKDMY 465

Query: 237 ------FPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYK------FLIQESFSEI 278
                  P             R+         ID+ ++ Q++         L        
Sbjct: 466 DTYCQSNPDNSICTTKGGITYRDVGDVSIEKRIDFIMVKQSSKSTTTNQIELTNLESVGG 525

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304
              +D+        SDH  +   + F
Sbjct: 526 QRFDDNGIPLSIFPSDHSGLVSTFKF 551


>gi|325660677|ref|ZP_08149307.1| exodeoxyribonuclease [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325473038|gb|EGC76246.1| exodeoxyribonuclease [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 250

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 76/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                         + K  DADI  +QE          
Sbjct: 1   MKFISWNVNGIRACVQKGF---------------LDFFKEADADIFCIQESKMQEG-QLK 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  F++           +    ++  A+  K   +        G          R
Sbjct: 45  LELEGYHQFWN----------YAERKGYSGTAIFTKQEPLSV----AYGIGMEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ + + ++  +     +  +      +   +  + L+           
Sbjct: 91  -----VITLEFEEFYFVTVYTPNSQNELARLDYRMQWETEFLKYLKKLEA--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  +     +  F      +    
Sbjct: 138 PVIFCGDLNVAHREIDLKNPKTNRKNAGFTDEERGKFTELLSAGFIDTFRYFYPEQEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L                      SDHCP+ 
Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSECLKDRLRDAKILT-----------DVMGSDHCPVE 246

Query: 300 IDYD 303
           +D++
Sbjct: 247 LDFE 250


>gi|168205412|ref|ZP_02631417.1| exodeoxyribonuclease III [Clostridium perfringens E str. JGS1987]
 gi|170663003|gb|EDT15686.1| exodeoxyribonuclease III [Clostridium perfringens E str. JGS1987]
          Length = 250

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 74/299 (24%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y K+ DADI  LQE          
Sbjct: 1   MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LDLEGYHQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     +                  L         S  
Sbjct: 91  -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                         D + T+  +  +  F           
Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +           IDYF++  N    + +      +             SDHCP+
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEAFIDTEIL-----------GSDHCPV 245


>gi|160945969|ref|ZP_02093195.1| hypothetical protein FAEPRAM212_03502 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443700|gb|EDP20705.1| hypothetical protein FAEPRAM212_03502 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103228|emb|CBL00772.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii SL3/3]
          Length = 250

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 78/303 (25%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +    LDADI  +QE       A  
Sbjct: 1   MKLISWNVNGLRACLTHGF---------------AESFAALDADIFSVQETKMQPGQADF 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+      YS E              ++  A   K   +   +   L   D   R    
Sbjct: 46  APEGYTEYTYSAE-----------KKGYSGTACWCKTAPLAVTTGIGLEQHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L +E  G   ++++ +  +        +               L        ++  
Sbjct: 91  ---VLTLEYPG--FYLVNCYTPNSQDGLKRLDYRMEWEDAFRAYLLAL--------DAKK 137

Query: 204 PFVIAGDFNRKINYLGNNDD----FWKTIDPNDSLIRFPKEKDSRCNA----------NK 249
           P ++ GD N     +   +             +             ++            
Sbjct: 138 PVILCGDLNVAHTEMDIKNAKTNRMSAGFTDQERAKMTELLAAGFADSFRVVHPDEVKYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ +     +        ++            SDHCP+ +
Sbjct: 198 WWSYRFHAREKNAGWRIDYFIVSRRIADRIRAAEIHNEIF-----------GSDHCPVEL 246

Query: 301 DYD 303
             D
Sbjct: 247 QID 249


>gi|149521136|ref|XP_001516262.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair
           enzyme) 1 [Ornithorhynchus anatinus]
          Length = 324

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 82/311 (26%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             ++     +++ SWN++ L                         + +    DI+ LQE 
Sbjct: 59  SSSSGQPATLKICSWNVDGLRAWVKKKG---------------LDWVREEAPDILCLQET 103

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               A +K+ P+      +        +    + + ++ + +  +   +        G  
Sbjct: 104 KC--AESKLPPELKDLSDFPHRYWAAPA----DKEGYSGVGLLSRRRPLSVS----YGIG 153

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V        +   ++ +++ +        +          +  Q     
Sbjct: 154 EEEHDQEGRVIVA-----EFEAFVLVTVYVPNSGRGLVRLDYRQRWDQAFRRFLQA---- 204

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
               + +  P V+ GD N     +   +                 F + +   D    F 
Sbjct: 205 ----QAARKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLGTVDLADSFR 260

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++ +     L                   
Sbjct: 261 HLYPAAAYAYTFWTYMMNARSKNVGWRLDYFLLSRALLPSLCDSKIR-----------SA 309

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 310 ALGSDHCPITL 320


>gi|13473422|ref|NP_104989.1| hypothetical protein mlr4014 [Mesorhizobium loti MAFF303099]
 gi|14024171|dbj|BAB50775.1| mlr4014 [Mesorhizobium loti MAFF303099]
          Length = 289

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 84/312 (26%), Gaps = 57/312 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           ++LV++NI      +G             D   +    +   AD+V LQE+   N     
Sbjct: 1   MKLVTYNIQYGIGLDG-----------QYDVARIADAVR--GADVVALQEVTRNNPRNGG 47

Query: 79  ---AVAKVFPKNTWCIFYSTERLINHS-----KRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                        +   Y +    N        R           +  K    L ++  L
Sbjct: 48  RDMVAEIGEALPDYFAVYGSNFEANIGSRIENGRAITTTFQLGNMMLSKTPIHLSRNLLL 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             ++        R A+E L+E     I    IHL     ++           LL+   + 
Sbjct: 108 PRSRSFEMMNFQRGALEALIETPLGFIRFYSIHLDHRSPVERASQIQFLRRRLLNYALEG 167

Query: 191 -----LKDWITQKKESLVPFVIAGDFNRKINYLG-------NNDDFWKTIDPNDSLIRFP 238
                + +    +      FV  GDFN               +  F   +  + ++    
Sbjct: 168 GALSGVAEIGLPELPHPEAFVAMGDFNMLAGSPEYVELAGRPDHQFGMPLTADFAVDAAV 227

Query: 239 KEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           +   +  +    +  K          IDY     +  + L                    
Sbjct: 228 RLNVTGDDLASWVDPKDPANTSRHKRIDYVFTSASPARSLQ-----------HLWVDHQA 276

Query: 291 RLSDHCPISIDY 302
             SDH P+  + 
Sbjct: 277 TGSDHLPVWAEL 288


>gi|333026371|ref|ZP_08454435.1| putative exodeoxyribonuclease III [Streptomyces sp. Tu6071]
 gi|332746223|gb|EGJ76664.1| putative exodeoxyribonuclease III [Streptomyces sp. Tu6071]
          Length = 267

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/274 (9%), Positives = 74/274 (27%), Gaps = 58/274 (21%)

Query: 59  QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++     AD++ LQE+   ++    +V     W   ++           + +     +++
Sbjct: 22  EWLAGTSADVLCLQEVRAEAHQLPEEVARPEGWFSLHAP----------AADKGRAGVSL 71

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +      ++       D   R        +  ++ G  + V  ++L S       +  
Sbjct: 72  YTRREPDRVRTGFGSAEFDGSGR-------YVEADLPG--VTVASLYLPSGEVGTERQEQ 122

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                       + L++            ++ GD+N                        
Sbjct: 123 KYRFMDEFLTYLKELRERA---AAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLPEE 179

Query: 221 NDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKF 269
            +   + +D      +     +             +           IDY +        
Sbjct: 180 REWLSRVLDPADGGYVDVVRAQHAGVEGPYSWWSYRGRAFDNDTGWRIDYHMASAGLAGR 239

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++          +   +  +R SDH P+++ Y+
Sbjct: 240 ALKAEV-------ERAATHEERWSDHAPVTVTYE 266


>gi|241765944|ref|ZP_04763871.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
 gi|241364094|gb|EER59319.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
          Length = 255

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 89/294 (30%), Gaps = 49/294 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             T S     ++++ N++                        LR+  + + AD+VFLQE+
Sbjct: 3   SSTHSAPIAFKVLTVNVHKGFTTFNRRF----------ILHELREAVRGVGADLVFLQEV 52

Query: 75  GSYNAVAKV----FPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
              +A        FP+     F +        + +    ++     A+  K      +++
Sbjct: 53  LGTHARHASRVANFPQVPHYEFLADALWAQFAYGRNAVYDNGDHGNALLSKFPITHYENH 112

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            +  +         R  +  +++  G +  V  I +                 S   +Q 
Sbjct: 113 DISVSG-----PEARGMLHCVLQPPGHQRPVHAICVHLGLR-----------ESHRQRQL 156

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           Q + + +     +  P V+AGDFN        N      +        F +         
Sbjct: 157 QCVCELV-HGLPADEPVVLAGDFNDW-----RNRAHGVLLRGAGLQEVFVQATGRPVRTF 210

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 + +D   +   A    +              K+   +LSDH P++ + 
Sbjct: 211 PAALPLLALDRIYVRNAAVHAPLALP-----------KTPWNKLSDHAPLAAEI 253


>gi|88859311|ref|ZP_01133951.1| hypothetical protein PTD2_20047 [Pseudoalteromonas tunicata D2]
 gi|88818328|gb|EAR28143.1| hypothetical protein PTD2_20047 [Pseudoalteromonas tunicata D2]
          Length = 330

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 98/328 (29%), Gaps = 38/328 (11%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVF 70
           +   +S+   +R+ S N+   ++        +   S ++       L    K++   I+ 
Sbjct: 1   MTPPSSLQSSLRIASLNLYNFAKPPFSFYHPDEHYSAQQWQEKCLWLSSQLKHVQPAIIG 60

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQ---Q 126
            QE+ S + +A++        F + +  ++             A+A       +      
Sbjct: 61  FQEVFSPDELARICQSCGLPFFSTVSNPVLAEDDPFLFIKPVVALASLYPIETITVLKPD 120

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLEN-------- 175
           +  L           NR  ++  + I        +++ +  K    L S  +        
Sbjct: 121 TQLLAAFNLPIDFQFNREPIKAKILIPVLGAATFYIVHLKSKRPTSLSSYTDVAFKEQPI 180

Query: 176 ----------TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                      Y        + A   +D I  + E     +I GDFN +I   G    F 
Sbjct: 181 ASALLNATLGRYHSDMQRSLELALIYQDVIKSQTEGEHCTLIMGDFNDQITSDGLGFIFN 240

Query: 226 KTIDPNDSLIRFPKEKDS-------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
           + I    +        DS       R   +        +DY ++           S    
Sbjct: 241 QVISDGLAQTPSFGVTDSYQGSEQHRAGTHYYQNQGKVLDYILLSTPLLLPQSPFSVEFN 300

Query: 279 LYNEDDIKSRGKR---LSDHCPISIDYD 303
             ++  + + G      SDH  I ID  
Sbjct: 301 AIDQHILNTSGLEQKLSSDHAFIYIDIT 328


>gi|84390811|ref|ZP_00991503.1| extracellular nuclease-related protein [Vibrio splendidus 12B01]
 gi|84376614|gb|EAP93491.1| extracellular nuclease-related protein [Vibrio splendidus 12B01]
          Length = 864

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/372 (12%), Positives = 102/372 (27%), Gaps = 91/372 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  +           +      LDADI+ L E
Sbjct: 469 GDLRIATFNVLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLME 528

Query: 74  MGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116
           + +      +A+ ++  +         + +            +    +     I T +  
Sbjct: 529 IENNGFGEGSAIHQLVNQLNDRIERKKDRYTFVAVDSNEDGVTDEMDSIGTDVITTGVIY 588

Query: 117 RKKNVRVLQQSY------------PLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162
           RKK V++                    G      +   R ++    ++ G  +K+ V   
Sbjct: 589 RKKVVKLKDSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVKGTKEKLTVAIN 648

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202
           H KS                      +      +     A  L + +   K         
Sbjct: 649 HFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDM 708

Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  P ++  D+             N  I+ +    D    I  N   I    +K  
Sbjct: 709 NSYGMEDPMLVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHP 768

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290
              +         +D+ ++  +    ++  +   I   E  +    +             
Sbjct: 769 DSWSYSYNDEVGALDHLLISDSLKDRVVDATDWHINGGESTLFDYNEEFKGDLPKYQDHF 828

Query: 291 RLSDHCPISIDY 302
           R SDH P  ++ 
Sbjct: 829 RSSDHDPAVLEL 840


>gi|255020178|ref|ZP_05292247.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756]
 gi|254970320|gb|EET27813.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756]
          Length = 258

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 79/299 (26%), Gaps = 73/299 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWN+N+L                      ++ + +    D++ LQE    +       
Sbjct: 3   ITSWNVNSL----------------KVRLPQVQTFLEKFQPDLLCLQETKLPDD------ 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                      R   ++        +  +A+  +         P  G  D  +    R  
Sbjct: 41  ----RFPTDHLREQGYAALYHGQSAYNGVAMLSRAPLAD----PECGFADGEAEPQARLC 92

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                      + V+++++ +   LDS +  +        +    L++++          
Sbjct: 93  AATC-----ASVRVVNVYVPNGQALDSDKYAFK------LRWLAALREYLRDALARWPRL 141

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           V+ GDFN                              ++    +  +             
Sbjct: 142 VVLGDFNIAPGDGDVFDAAAWGEDILCSPAERAALTALEDLGFVDAYRALNPDG-REFTW 200

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +           ID  ++    +  + Q             +   +R SDH P+S+
Sbjct: 201 WDYRAASFRRNRGLRIDLILVSTALWPQVRQVLVH-------REERGAERPSDHAPVSL 252


>gi|218710781|ref|YP_002418402.1| hypothetical protein VS_2864 [Vibrio splendidus LGP32]
 gi|164562273|gb|ABY61048.1| hypothetical protein [Vibrio splendidus]
 gi|218323800|emb|CAV20157.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 867

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/372 (12%), Positives = 102/372 (27%), Gaps = 91/372 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  +           +      LDADI+ L E
Sbjct: 472 GDLRIATFNVLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLME 531

Query: 74  MGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116
           + +      +A+ ++  +         + +            +    +     I T +  
Sbjct: 532 IENNGFGEGSAIQQLVNQLNDRIERKKDRYTFVAVDSNEDGVTDEMDSIGTDVITTGVIY 591

Query: 117 RKKNVRVLQQSY------------PLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162
           RKK V++                    G      +   R ++    ++ G  +K+ V   
Sbjct: 592 RKKVVKLKDSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVKGTKEKLTVAIN 651

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202
           H KS                      +      +     A  L + +   K         
Sbjct: 652 HFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDM 711

Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  P ++  D+             N  I+ +    D    I  N   I    +K  
Sbjct: 712 NSYGMEDPMLVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHP 771

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290
              +         +D+ ++  +    ++  +   I   E  +    +             
Sbjct: 772 DSWSYSYNDEVGALDHLLISDSLKDMVVDATDWHINGGESKLLDYNEEFKGDLPKYQDHF 831

Query: 291 RLSDHCPISIDY 302
           R SDH P  ++ 
Sbjct: 832 RSSDHDPAVLEL 843


>gi|33519889|ref|NP_878721.1| exonuclease III [Candidatus Blochmannia floridanus]
 gi|33504234|emb|CAD83497.1| exodeoxyribonuclease III [Candidatus Blochmannia floridanus]
          Length = 267

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 77/310 (24%), Gaps = 74/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R VS+NIN L                      L      L  D++ LQE   ++ +   
Sbjct: 1   MRFVSFNINGLRAH----------------MHQLDALITQLKPDVIGLQETKVHDDI--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +         +  +A   K   +      +  +  S  R    
Sbjct: 42  -------FPVKIIEQYGYYVHFYGQKKYYGVAFLFKYPPITVTQGNVYDSLSSQKRT--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +      + +++ +          EN +S       Q  Q L+ +I     +  
Sbjct: 92  --IIAQIVTKIGILTIINCYCP------QGENYHSNKFLFKRQFFQNLQHYIENTYNNQS 143

Query: 204 PFVIAGDFNRKINY---------------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                          L     +  ++     +  + K   
Sbjct: 144 ILLIMGDLNISPTDLDVGISEQNKKRWIKSGKCSFLPEERSWIHSLMKWGLIDIYRKNNP 203

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      K           ID  ++ Q      I         +           S
Sbjct: 204 YNNKRYSWFSYKYDGFHKNKGLRIDLILVTQPLENLYING-------DISYDIRGMPNSS 256

Query: 294 DHCPISIDYD 303
           DH PI +D+D
Sbjct: 257 DHAPIWVDFD 266


>gi|332667073|ref|YP_004449861.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332335887|gb|AEE52988.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 352

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/342 (11%), Positives = 82/342 (23%), Gaps = 57/342 (16%)

Query: 5   YVLALVFFL-VPCTASVAQKVRLV---SWNINTLSEQEGVSLWKN-----------SVKR 49
            +L L+F   V        + R+     +N+  L +    +   +           +  +
Sbjct: 10  IILVLIFCTGVNLAVFGQDRYRIAVIGFYNLENLFDTVNDTTINDEDFLPTGANLWTPDK 69

Query: 50  TTSDYTLLRQYAKNLD----AD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102
                  + +    L      D   I+ + E+ +   +  +  +       +    I H 
Sbjct: 70  YREKQGNMARVIAELGVEKTPDGVAILGVSEIENRKVLEDLVKEP---AIAARNYQIVHH 126

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYP--LLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                  I  A+    K  +V        ++   +   R   R  + +    +G+ I V 
Sbjct: 127 DSPDERGIDVAMLYNPKYFKVTSSKMLPVIIYLDEQGDRQFTRDVLLVSGVFDGEPIHVF 186

Query: 161 DIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
             H  S    +     +   + S+  +    L       ++    F+I GD N       
Sbjct: 187 VNHWPSRRGGEKASEPWRVKAASVCKKACDSLLA-----QDPKAKFIIMGDLNDDPVNNS 241

Query: 220 NNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------ 268
             +          +   D    F                    D  ++     +      
Sbjct: 242 VKEVLRAKKEKEEVRKGDMFNPFYNLYKKGLGTLAYRDAWSLFDQIILSPAWVQPEVGGY 301

Query: 269 -------------FLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              F                 SDH P
Sbjct: 302 QYFQANVHGPNYLRQQSGQFKGYPLRTYVGTEYRGGFSDHFP 343


>gi|332296037|ref|YP_004437960.1| exodeoxyribonuclease III Xth [Thermodesulfobium narugense DSM
           14796]
 gi|332179140|gb|AEE14829.1| exodeoxyribonuclease III Xth [Thermodesulfobium narugense DSM
           14796]
          Length = 254

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 86/302 (28%), Gaps = 73/302 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + ++N+N                R+ +D   L    +  + +I+ LQE+     +     
Sbjct: 3   ITTFNVN--------------SIRSRTDIVNL--LIEKHNPEIIALQEIKCTPDLFPNLA 46

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
              +    S                +  +AV  K    L  S+     +D+ ++  +   
Sbjct: 47  FPDYKCLVS------------GEKSYNGVAVCTK----LDSSHFENEFQDTVNQKRS--- 87

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           + +  E       +++I+        + +  Y           + L  ++ +      P 
Sbjct: 88  LFVKFEN----FILMNIYFPHGDLRGTDKFYYKLDF------YKKLLAFLKENFTPNDPI 137

Query: 206 VIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           ++ GDFN  +                          + ++            +       
Sbjct: 138 IMLGDFNVALTDFDVYDPQILKDTIGTMPEERKALRELLNYGFIDTYRHLHPNDPGFTWF 197

Query: 250 -------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       + IDY ++ +     +          +    K R  + SDH P+ ++ 
Sbjct: 198 NYIGGDIWKNKGMRIDYILVTKPLINKVKNVEV-----DLSLRKRRTPKPSDHAPLVMEI 252

Query: 303 DF 304
           +F
Sbjct: 253 NF 254


>gi|209966061|ref|YP_002298976.1| endonuclease [Rhodospirillum centenum SW]
 gi|209959527|gb|ACJ00164.1| endonuclease [Rhodospirillum centenum SW]
          Length = 266

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/310 (10%), Positives = 82/310 (26%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---MGSYNAV 80
           +RL +WNIN++  +  + L                        D+V LQE   +     +
Sbjct: 1   MRLCTWNINSVRLRLPLLLRLL----------------DEHAPDVVCLQETKTVDDTFPL 44

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++                           +  +A+  +     ++     G +D     
Sbjct: 45  RELA------------ERGYRFAHIHGMKSYNGVAILSRLELGAREVRHWCGREDCRH-- 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                        G  I + ++++ +    D  +   +   +   Q    +  W  +++ 
Sbjct: 91  ------IATTLPVGPGIELHNLYIPAG--GDVPDPAVNEKFAHKLQFLDEMIRWWPEQRS 142

Query: 201 SLVPFVIAGDFNRKI--NYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSR 244
              P ++ GD N       + ++      +                   +    +     
Sbjct: 143 PDRPMILVGDLNIAPLETDVWSHRQLLDVVSHTPVEVEKLTQVQRTLGWVDAVRRFVPET 202

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+  +       L   +         + +    + SD
Sbjct: 203 EKLYTWWSYRSADWAASDRGRRLDHVWVTPPLAPALAGTTVLR------EARGWEPKPSD 256

Query: 295 HCPISIDYDF 304
           H P+ +D+ F
Sbjct: 257 HVPVLVDFRF 266


>gi|168002952|ref|XP_001754177.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694731|gb|EDQ81078.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 79/328 (24%), Gaps = 50/328 (15%)

Query: 25  RLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           R+VS+NI   +  +        +   R  +    + +   + DAD++ LQE+  Y +  K
Sbjct: 1   RIVSYNILAQSYVKGISFPHSPSPCLRWKNRSKAVLERLLSFDADVLCLQELDEYESYYK 60

Query: 83  V-FPKNTWCIFYSTERLINHSKRDSNND---------IHTAIAVRKKNVRVLQQSYPLLG 132
               +  +   Y                                            P   
Sbjct: 61  SRLTREGYSSVYIQRSGRKRDGCGIFFKRSRMELVEEQVVDFNDLVPPPTEDTPEVPSED 120

Query: 133 AKDSFSRAGN--------------------------RRAVELLVEINGKKIWVLDIHLKS 166
              + S +                              A+     + G     + +    
Sbjct: 121 DSQTGSDSVPVNNFKPEQSKKVRGDPNDPRVRLKRDCVAILAAFRMLGAPNKFMILGNTH 180

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------N 216
             +     +        L  Q    +  +  K +S    ++ GD+N             +
Sbjct: 181 LYWDPEWADVKLAQARYLLLQIVKFQQGLCSKLDSNPLLLVCGDYNSTPGDQVRLFLGSS 240

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--ES 274
                ++      P   L  + +   +  N N        +DY           I     
Sbjct: 241 ESNRGEEQLPERAPLPLLSLYEEALGAHPNTNVTPGFTGTLDYIFFRPTDSLRFINLLAL 300

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +    + +         SDH PI  D+
Sbjct: 301 PTRDSPDLEGGLPNYSHPSDHLPIGADF 328


>gi|323340218|ref|ZP_08080482.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644]
 gi|323092409|gb|EFZ35017.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644]
          Length = 254

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 73/302 (24%), Gaps = 78/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +  VSWN+N L      +                 +  + LDAD   +QE        ++
Sbjct: 1   MNFVSWNVNGLRAVLKKNF---------------SEVFEKLDADFFCIQETKLQEGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K+              D   R    
Sbjct: 46  -DLPGYHQYWN----------YAERKGYSGTAIFTKHEPQSVSYGIHNSEFDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++  +  +        +               L        +   
Sbjct: 91  -----VITLEYASFYLVCCYSPNSQPKLKRLDFRMGFEDAFLNYLNDL--------KEKK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                        +  N  L  F           
Sbjct: 138 PVIMCGDLNVAHEEIDLKNPKTNHRNAGFSNEERSCMTRLLENGYLDTFRFFHPDETGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++    L                      SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSESLKDSLENAEILT-----------DIMGSDHCPVL 246

Query: 300 ID 301
           ++
Sbjct: 247 LE 248


>gi|289207222|ref|YP_003459288.1| endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
 gi|288942853|gb|ADC70552.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
          Length = 290

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 87/291 (29%), Gaps = 55/291 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS-------DYTLLRQYAKNLDADIVFLQE 73
           AQ++RL+S+N         +  +  +  +          +   + ++    D DIV +QE
Sbjct: 33  AQRLRLLSFNAQVGIPSSRLHHYLTNSWKHVLPYKGRIGNLDRVARFIS--DFDIVGVQE 90

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           +   +  +      ++    +      N   R+       ++A+  +      + + L G
Sbjct: 91  LDGGSLRSNFVDLASYLSEKARFPHTYNRINRNLGQFAKHSLALFSRLEPERVEMHRLPG 150

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                     R A+E                  +   L       +        Q  ++ 
Sbjct: 151 PLPGRGAIEARYAME------------------NGEELVLFLLHLALGRRARQAQLDYVA 192

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + I     S    V+ GD N + + L       +T                      +  
Sbjct: 193 ERIQ----SERHAVVMGDLNCQQDSLEIRRLVARTGLLEPISCPAT---------YPSWD 239

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++  D+ ++  +               +  D++     LSDH P+ I+ +
Sbjct: 240 PRLVFDHILLTPDL--------------HVSDMRVYNVALSDHLPVGIEIE 276


>gi|257484686|ref|ZP_05638727.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|320323872|gb|EFW79956.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320328009|gb|EFW84014.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 237

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 78/256 (30%), Gaps = 41/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSN 107
              LR+  + + ADIVFLQE+     S+    K +P  +   F +     +  + +    
Sbjct: 16  LPELREAVRTVSADIVFLQEVHGEHQSHARSVKDWPTISQYEFLADSMWNDFAYGRNAVY 75

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            D     A+  K   +  ++  +     S      R  +  ++E+      V  + +   
Sbjct: 76  PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILEVPYAG-RVHAVCVHLG 129

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         S   QQ   L + + +      P ++AGDFN               
Sbjct: 130 LR-----------ESHRRQQLNLLAELMER-LPEGEPVIVAGDFNDWRQRAD------AL 171

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           ++       F +   +   +       + +D   +           S             
Sbjct: 172 LEGTGLHEVFVERFGAPAKSFPARWPLLRLDRIYVRNATSHRPKVLS-----------SR 220

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P++++  
Sbjct: 221 PWSHLSDHAPLAVELT 236


>gi|291614973|ref|YP_003525130.1| endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus
           ES-1]
 gi|291585085|gb|ADE12743.1| Endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus
           ES-1]
          Length = 271

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 88/293 (30%), Gaps = 53/293 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVAK 82
            R++ +N+       G    +        D  L     ++ DADI+ LQE+        +
Sbjct: 18  FRVMQFNMQF-----GQIWDEAEGDHAPIDLDLTIAEIQSHDADIIILQEVEHAQPGGVQ 72

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKDSF 137
           + P   +    +  R  +        D         +A+  +          L  +   F
Sbjct: 73  LQPPPNYTRLKAAFRGYDSYFSYPKADPRELPFGIGLAIFSRTPLRDTFRMELPSSPVEF 132

Query: 138 SRAG------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              G      +R  +     ++G+++ + + HL ++  L+S    +     L+ +Q +  
Sbjct: 133 EFDGKKRTPTDRLLIGAKTTLDGQEVQLFNTHLLAYFMLNSSSEQHLQQRQLVVEQLR-- 190

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                   +S  P +I GDFN       N D                 E           
Sbjct: 191 --------KSTGPTLIGGDFNV-----SNRDSLVHQFADAGYQPVQTTEV-------TWR 230

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +D+     +        S    +           + SDH  +  +++F
Sbjct: 231 YRPFVLDHIFHSPHLQ------SVRYTVKPT--------KASDHHILLAEFEF 269


>gi|51246268|ref|YP_066152.1| exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila LSv54]
 gi|50877305|emb|CAG37145.1| probable exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila
           LSv54]
          Length = 480

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 82/307 (26%), Gaps = 82/307 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
             R +SWN+N +   E                       + L+ D++ LQE         
Sbjct: 227 SYRYISWNVNGIRAVEKKGF---------------IDIVQELNPDVIGLQETKAQPEQLS 271

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +     +  ++ + +   +          + +A   K+  +      + G        
Sbjct: 272 ESLKNIPGYTSYWYSAQRKGY----------SGVAFYSKHEPLQV----IYGIGAEEFDC 317

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R             +   D +L +  F +S +        L     + L  +  + ++
Sbjct: 318 EGRVI----------TLEFADHYLATIYFPNSADQLKRLDYKLRFN--RALLAFFQKLEK 365

Query: 201 SLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                ++ GDFN                             + ++         +  +  
Sbjct: 366 EKA-VILCGDFNVAHKEIDLKNPKSNVKNAGFTPEERAWMDEFLEAG--YTDTFRLFNQD 422

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDYF + +N  K ++       +             SDH
Sbjct: 423 PENYSWWSYRFSARSKNIGWRIDYFCVSENGQKRIVNAEILPEV-----------MGSDH 471

Query: 296 CPISIDY 302
           CP+ +D+
Sbjct: 472 CPVLLDF 478


>gi|317476018|ref|ZP_07935271.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii
           1_2_48FAA]
 gi|316907813|gb|EFV29514.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 371

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/322 (11%), Positives = 85/322 (26%), Gaps = 79/322 (24%)

Query: 14  VPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           VP TA    +       + + ++N++               + T      + +Y +    
Sbjct: 98  VPATAPAPNREGKSGVCLTVATYNVHHFG-----------NEITGYSCKEIARYMQQRHV 146

Query: 67  DIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           D++  QE G       +++ +      + +  + +                   +R    
Sbjct: 147 DVLCFQEFGDNPHFTTDSLRRALSHWPYALIPADDS------------------IRGILP 188

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE------- 174
             +   YPL G +       +  ++   + +    + +L+ HL++     +         
Sbjct: 189 VAVFSRYPLAGGRFITYPRSSNCSMACDIVLGADTLRLLNNHLQTTSVSQNRRKWERELA 248

Query: 175 -NTYSPSCSLLSQQAQWLKD-----------WITQKKESLVPFVIAGDFNRKINYLGNND 222
            N        +   A+ L +            +     S  P ++ GDFN   +      
Sbjct: 249 ANDTRREAQAVQDAAETLHENFVKRAAQTDSIVRLVIASPHPVLVCGDFNSLPSSYTYRQ 308

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                         F           +  ++ + IDY                       
Sbjct: 309 L------SGILQDGFKTGGHGYMYTYRYAKHMLRIDYAFHSSKLDC-------------T 349

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
           D         SDH P+     +
Sbjct: 350 DYYSPDLDLCSDHNPVIFTVKY 371


>gi|302341817|ref|YP_003806346.1| endonuclease/exonuclease/phosphatase [Desulfarculus baarsii DSM
           2075]
 gi|301638430|gb|ADK83752.1| Endonuclease/exonuclease/phosphatase [Desulfarculus baarsii DSM
           2075]
          Length = 345

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/327 (12%), Positives = 90/327 (27%), Gaps = 62/327 (18%)

Query: 14  VPCTASV----AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +P  A+      Q++ +VS+NI   S          S +   ++          L  D +
Sbjct: 39  LPSVAATEFRPGQELVVVSYNIGYFSGMTNNLPVARSRELYAANLARAVAALGPLRPDAL 98

Query: 70  FLQEMG-------SYNAVAKVFPKN---------TWCIFYSTERLINHSKRDSNNDIHTA 113
            LQE+          +    +              W   Y                   A
Sbjct: 99  ALQEVDFAASRSFDQDQAVLLAQGLGLGWLTKAVGWDKKYVPYPYWPPQHHFGRVVSGQA 158

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
           +  R     + + +    G    +  A   +R      +E+ G+++W+  +HL+++    
Sbjct: 159 LLARYPLADLERHALAPRGDTPFYYNALYMDRLVQTAALELGGRRVWLACLHLEAWDRPT 218

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------- 224
                          QA  +   +        P ++ GDFN    +      F       
Sbjct: 219 RERQAR---------QAAAILARLR----ERGPLIVMGDFNTTPTWARVQTGFVDEPEQD 265

Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                       +   ++  +     ++        R    +D+   D    + + +   
Sbjct: 266 FRGEATLAAMTALSLREAFDQGGSADEAATLTFPADRPSRKLDHIFYDPTRLELVWRRVV 325

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                          + SDH P++  +
Sbjct: 326 V-----------EAGQASDHLPVAAAF 341


>gi|224537589|ref|ZP_03678128.1| hypothetical protein BACCELL_02469 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520786|gb|EEF89891.1| hypothetical protein BACCELL_02469 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 370

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 83/295 (28%), Gaps = 48/295 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
              +++S+NI                        L+  Y KN  ADI+ LQE  +  +  
Sbjct: 102 NSFKVLSYNIMGFDGAVKKDGEN-----------LILNYLKNSGADILCLQEYQTIESPR 150

Query: 82  KVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  K+                 R S       IA   K   +  ++       +     
Sbjct: 151 YLSQKDVEKALKDYPYHNIQIVGRGSGKGHTNRIACYSKFPILSSRTLDYASEYNGSVVY 210

Query: 141 GNRRAVELLVEING---------KKIWVLDIHLKSFCFLDSLENTY------SPSCSLLS 185
             +   + ++ IN          +   V +  LKS                 + + ++ +
Sbjct: 211 ELKMGEDTVMLINNHLESNKLTKEDKVVYESMLKSPETEKVKSGARLLIRKLAEASAIRA 270

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            QA  +   I   +      ++ GDFN        +    K ++       F K      
Sbjct: 271 PQADSIAQEIAASRYP--YIIVCGDFNDTPISYA-HRVIEKGLND-----AFTKSGRGLG 322

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +    +    ID  +  +N   +             +    R  + SDH PI  
Sbjct: 323 ISYNQNKFYFRIDNILASKNLKPY-------------NCTVDRSIKESDHYPIWC 364


>gi|323508160|emb|CBQ68031.1| related to APN2-AP endonuclease, exonuclease III homolog
           [Sporisorium reilianum]
          Length = 737

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 89/321 (27%), Gaps = 61/321 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+  WNIN L   +G   W                  ++L ADI   QE  M       
Sbjct: 1   MRITVWNINGLRTLKGYQPWYKLPDWE--------ACLEHLGADIACFQETKMTRKQLTE 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR------KKNVRVLQQSYPL-LGAK 134
            +    ++  F++      +S   +      +I ++       +       + PL     
Sbjct: 53  PMCILPSYNAFFNFHPAKGYSGTVTYVKKSVSIPLKAEQGITGRLPVTNVSTNPLIPSEP 112

Query: 135 DSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                A  R  VE  +     +  +  VLD+ L     +     T            Q L
Sbjct: 113 IGCIPADTRDDVEPQIWNALDDEGRCVVLDLGLFVLFNVYCPNETGPERLEYKMTYYQGL 172

Query: 192 KDWITQKKESLVPFVIAGDFN--------------------RKINYLGNNDDFWKTIDPN 231
            +   +  ++    +I GD N                       +       F   + P+
Sbjct: 173 AERAHRLIQAGRQVMIVGDMNIIRDPIDHCDAEQSMKEYGWDHFHQHPARSWFQTFLAPH 232

Query: 232 DSLIRFPKEKDS------RCNAN----KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                  +           C       +     + +DY ++ +    ++        +Y 
Sbjct: 233 GKFHDVGRLYHPERKKMFTCWNTLIDARPANYGVRLDYTLVTEGLLDWIKGADIQPDVY- 291

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                      SDHCPI +D 
Sbjct: 292 ----------GSDHCPIYVDL 302


>gi|221330655|ref|NP_001137776.1| recombination repair protein 1, isoform B [Drosophila melanogaster]
 gi|220901923|gb|ACL82983.1| recombination repair protein 1, isoform B [Drosophila melanogaster]
          Length = 706

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 80/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ SWN+  L                        Q     + DI  LQE    +     
Sbjct: 454 LKICSWNVAGLRAWLKKDG---------------LQLIDLEEPDIFCLQETKCANDQLPE 498

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     +  ++                 +  +A+  K + +  +        D   R  
Sbjct: 499 EVTRLPGYHPYWLCMP-----------GGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRM- 546

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    +K +++++++ +                L     + L          
Sbjct: 547 --------ITAEYEKFYLINVYVPNSGRKLVNLEPRMRWEKLFQAYVKKLDAL------- 591

Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P VI GD N                   +     D    +     +  F      R  
Sbjct: 592 -KPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERDKMTELLGLGFVDTFRHLYPDRKG 650

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A                  +DY ++ +     +++                    SDHCP
Sbjct: 651 AYTFWTYMANARARNVGWRLDYCLVSERFVPKVVEHEIRSQCL-----------GSDHCP 699

Query: 298 ISI 300
           I+I
Sbjct: 700 ITI 702


>gi|218264874|ref|ZP_03478549.1| hypothetical protein PRABACTJOHN_04259 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221713|gb|EEC94363.1| hypothetical protein PRABACTJOHN_04259 [Parabacteroides johnsonii
           DSM 18315]
          Length = 297

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 90/318 (28%), Gaps = 39/318 (12%)

Query: 1   MIRKYVLALVFF--LVPCT----ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M R ++L  + F  L+P T     +  +K+R++S+NI    E +                
Sbjct: 1   MKRLHILYTLLFIWLLPVTSNGQPAGKEKLRVISYNIWNGFEHDAS------------RR 48

Query: 55  TLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
                + K    DI+ + E+   +   + ++  +     +   +         SN  I  
Sbjct: 49  ANFINWIKGQQPDILAMTELVGFTEKDLGQLASEYGHKYYAIVKEEGYPVGITSNEPITV 108

Query: 113 ------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL--VEINGKKIWVLDIHL 164
                        +V+       +        +   + A  L   ++ N     ++    
Sbjct: 109 VKKQMEGFWHGMLHVKTHGLDMIVTHLSPHDWKFRLKEAQMLTSYIQDNQLDNCMVMGDF 168

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
            ++   D+             Q+    ++     ++    + +   F   I        +
Sbjct: 169 NAYSPFDADWVETHAQLIENMQKWDAEQETYRNMRDGRFDYSVLSKF-LSIGLTDICRLY 227

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                   +          +    +       +DY ++  +     +             
Sbjct: 228 VPA--DKRTTFPAAFLYGWQHGDTRLHGIGERLDYILVSPSLVSRCLDARIHN------- 278

Query: 285 IKSRGKRLSDHCPISIDY 302
                + +SDH P+S+D 
Sbjct: 279 -GIDTEGISDHYPVSVDL 295


>gi|17136678|ref|NP_476841.1| recombination repair protein 1, isoform A [Drosophila melanogaster]
 gi|150421656|sp|P27864|RRP1_DROME RecName: Full=Recombination repair protein 1; AltName:
           Full=DNA-(apurinic or apyrimidinic site) lyase
 gi|7295875|gb|AAF51175.1| recombination repair protein 1, isoform A [Drosophila melanogaster]
 gi|21428628|gb|AAM49974.1| LP05366p [Drosophila melanogaster]
          Length = 679

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 80/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ SWN+  L                        Q     + DI  LQE    +     
Sbjct: 427 LKICSWNVAGLRAWLKKDG---------------LQLIDLEEPDIFCLQETKCANDQLPE 471

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     +  ++                 +  +A+  K + +  +        D   R  
Sbjct: 472 EVTRLPGYHPYWLCMP-----------GGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRM- 519

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    +K +++++++ +                L     + L          
Sbjct: 520 --------ITAEYEKFYLINVYVPNSGRKLVNLEPRMRWEKLFQAYVKKLDAL------- 564

Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P VI GD N                   +     D    +     +  F      R  
Sbjct: 565 -KPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERDKMTELLGLGFVDTFRHLYPDRKG 623

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A                  +DY ++ +     +++                    SDHCP
Sbjct: 624 AYTFWTYMANARARNVGWRLDYCLVSERFVPKVVEHEIRSQCL-----------GSDHCP 672

Query: 298 ISI 300
           I+I
Sbjct: 673 ITI 675


>gi|158340|gb|AAA62769.1| recombination repair protein [Drosophila melanogaster]
 gi|3342457|gb|AAC27621.1| recombination repair protein 1 [Drosophila melanogaster]
          Length = 679

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 80/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ SWN+  L                        Q     + DI  LQE    +     
Sbjct: 427 LKICSWNVAGLRAWLKKDG---------------LQLIDLEEPDIFCLQETKCANDQLPE 471

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     +  ++                 +  +A+  K + +  +        D   R  
Sbjct: 472 EVTRLPGYHPYWLCMP-----------GGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRM- 519

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    +K +++++++ +                L     + L          
Sbjct: 520 --------ITAEYEKFYLINVYVPNSGRKLVNLEPRMRWEKLFQAYVKKLDAL------- 564

Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P VI GD N                   +     D    +     +  F      R  
Sbjct: 565 -KPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERDKMTELLGLGFVDTFRHLYPDRKG 623

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A                  +DY ++ +     +++                    SDHCP
Sbjct: 624 AYTFWTYMANARARNVGWRLDYCLVSERFVPKVVEHEIRSQCL-----------GSDHCP 672

Query: 298 ISI 300
           I+I
Sbjct: 673 ITI 675


>gi|269964497|ref|ZP_06178738.1| extracellular nuclease-related protein [Vibrio alginolyticus 40B]
 gi|269830835|gb|EEZ85053.1| extracellular nuclease-related protein [Vibrio alginolyticus 40B]
          Length = 986

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/378 (10%), Positives = 93/378 (24%), Gaps = 96/378 (25%)

Query: 16  CTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDA 66
             A     +R+ S+N+        +          R  ++          +      +DA
Sbjct: 469 APAIADSDLRIASFNVLNYFNSVADSGHENPTGQNRGATNLDEFLIQQAKIVAAMNKMDA 528

Query: 67  DIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHT 112
           DI+ L E+ +      +A+  +           ++ +      E+     +   ++ I  
Sbjct: 529 DIIGLMEVENNGFGDGSAIQNLVDALNAEIDDAEDHYTYVEIEEQDKYQDEYFGSDAIMV 588

Query: 113 AIAVRKK--------NVRVLQQSY--------PLLGAKDSFSRAGNRRAVELLVEIN--G 154
           AI  R           V +  + +              +       R ++     +   G
Sbjct: 589 AILYRANAVTPKDAAKVIITPEQHIAENTITRKEGTESNPAYDKYQRHSLLQTFTVKETG 648

Query: 155 KKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           + + ++  H KS                   +      +     A  + + + + K    
Sbjct: 649 EDLSIVVNHFKSKGSECIEEWIAGVEDSEPADLQGNCNNFRVSAAHAVGEALKEVKGD-- 706

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLI 235
             ++ GD N                           + TI                    
Sbjct: 707 -VLLMGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTTIGDGELQVEKTKIEKGYGLHN 765

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                  +   +         +D+ +   +  + ++      I   E ++     +    
Sbjct: 766 LNTLLHGTDTFSYTYSGELGNLDHALASSSLAQKVVAIEDWHINSLESNLFEYSSKYTGD 825

Query: 292 ---------LSDHCPISI 300
                     SDH P+ I
Sbjct: 826 MPKYKDAFSASDHDPVII 843


>gi|257463916|ref|ZP_05628302.1| exodeoxyribonuclease III [Fusobacterium sp. D12]
 gi|317061443|ref|ZP_07925928.1| exodeoxyribonuclease III [Fusobacterium sp. D12]
 gi|313687119|gb|EFS23954.1| exodeoxyribonuclease III [Fusobacterium sp. D12]
          Length = 250

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 80/301 (26%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                        +Y +  DADI  LQE        ++
Sbjct: 1   MKLISWNVNGIRACLKKGFM---------------EYFQAQDADIFCLQETKCSAGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +       +   D   R    
Sbjct: 46  -DLKGYHQYWNYAEKKGY----------SGTAIFTKKEPLSVSYGLGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +               L +          
Sbjct: 91  -----VICLEFEDFYMVTVYTPNSKNELERLDYRMIWEDEFRNYLSKLNE--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                         + +  +        F        +A 
Sbjct: 138 PVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERNKFTELLQAGFTDSFRYLYPDTLHAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+  +  + + +                 +  SDHCP++
Sbjct: 198 SWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEIH-----------AEQEGSDHCPVA 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|119482243|ref|XP_001261150.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya
           fischeri NRRL 181]
 gi|119409304|gb|EAW19253.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya
           fischeri NRRL 181]
          Length = 300

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 84/306 (27%), Gaps = 31/306 (10%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    +R+++ NI   +             R       L    +N DA  + LQE+   
Sbjct: 3   TTTELPLRILTHNIRY-ATNSPFKGELPWDDRKQPLLNELLFNTRNQDA-FICLQEVLHN 60

Query: 78  NAVAKVFPKNT--------------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
             V  +   N               W          + +   S      ++   +    V
Sbjct: 61  QLVDVLSGLNQHSSTVSKGASETQQWEYNGVGRDDGHKAGEYSPIFYQPSVWQLRHWESV 120

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                P   +K  +  A  R     +   N  +  VL ++       D    +   +  +
Sbjct: 121 WLSETPNKPSK-GWDAASIRILTIGVFTHNITRHTVLAMNTHL---DDQGSRSRFEAAKI 176

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKD 242
           + Q+    +    +   S+   ++AGDFN +      +          D+     P +  
Sbjct: 177 ILQKIDEYRS--GEFGTSIAGVLLAGDFNSQETQEAYSVLTGSESSLVDTAKAVEPSQHY 234

Query: 243 SRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCP 297
                             IDY +M           S+    Y    +    G  LSDH  
Sbjct: 235 GDYYTWTGFGYEGEDPTRIDYILMGPG---KNKLGSWKVNGYAVLANRFDSGVYLSDHRA 291

Query: 298 ISIDYD 303
           +  D  
Sbjct: 292 VVADVT 297


>gi|330957166|gb|EGH57426.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 291

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 80/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   +       D D+V L
Sbjct: 30  PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHGGRAGNLQKIGDLIN--DFDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    + Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALIVVMMHLALGT-------------RTRTLQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R K  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPKRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271


>gi|329955159|ref|ZP_08296116.1| exodeoxyribonuclease III [Bacteroides clarus YIT 12056]
 gi|328526158|gb|EGF53177.1| exodeoxyribonuclease III [Bacteroides clarus YIT 12056]
          Length = 254

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 82/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L                        ++  N   D++ LQE          
Sbjct: 1   MKIITYNVNGLRAAVTKGFP---------------EWLANEQPDVLCLQETK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +           H    +    ++ +A+  K        +   G          R
Sbjct: 38  LQPEQYPAEALDASGYKHYLYSARKKGYSGVAILTKREP----DHVEYGMGIEEYDNEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + ++ ++  S    D  +       +      +  + ++ + + +  
Sbjct: 94  F-----IRADYGDLSIVSVYHPSGTSGDERQ-------AFKMVWLEKFQQYVVELQRTRP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  +D                W T   N   I   +          
Sbjct: 142 KLILCGDYNICHEAIDIHDPVRNATNSGFLPEEREWMTRFLNAGFIDTFRLLHPDKQEYT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++++     L +        +           SDHCP+ +
Sbjct: 202 WWSYRFNSRAKNKGWRIDYCMVNEPVRPMLKEARILNDAVH-----------SDHCPMML 250

Query: 301 DY 302
           + 
Sbjct: 251 EI 252


>gi|325479466|gb|EGC82562.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 349

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 103/320 (32%), Gaps = 60/320 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           S+  + ++++WNI               G  +   S +   +    + Q  K+++AD   
Sbjct: 51  SIDNEYKIMTWNIGYGGLDKDTDFFMDGGKMVLPISKEHVENALDGILQSIKDINADFNL 110

Query: 71  LQEMGSYNAVAKVFPK---------------NTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           +QE+   +       +                 + + Y    +    K +S     T   
Sbjct: 111 IQEIDEDSKRTYNINEVEMFRENLLGNSIFAYNYKVKYVPYPIPPMGKMNSGILTQTKFK 170

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +        QQ  P        +         L +E   KK+ ++++HL ++   ++   
Sbjct: 171 I--SKAFRYQQPIPHKFPTRLANLKRGFDVSYLDIESTDKKLALINVHLDAYENGNNG-- 226

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                      Q + + ++I  + +     ++ GDFN+++      +   +  +P+D   
Sbjct: 227 --------RIAQIKQIFEFIQNEYDMGNYVIVGGDFNQELRENYKAERISEYWNPSDFPH 278

Query: 236 RFPKEKDS-------------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                                    N N   +  ID F++ +N     ++          
Sbjct: 279 EIFPNDFKLVYGDNVNSSRLNNTPYNPNDSYECIIDGFIVSKNIEVEDVKVE-------- 330

Query: 283 DDIKSRGKRLSDHCPISIDY 302
                 G + SDH P+++ +
Sbjct: 331 ----DLGFKNSDHNPVTMKF 346


>gi|318062091|ref|ZP_07980812.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actG]
 gi|318079946|ref|ZP_07987278.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actF]
          Length = 261

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/274 (9%), Positives = 74/274 (27%), Gaps = 58/274 (21%)

Query: 59  QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++     AD++ LQE+   ++    +V     W   ++           + +     +++
Sbjct: 16  EWLAGTSADVLCLQEVRAEAHQLPEEVARPEGWFSLHAP----------AADKGRAGVSL 65

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +      ++       D   R        +  ++ G  + V  ++L S       +  
Sbjct: 66  YTRREPDRVRTGFGSAEFDGSGR-------YVEADLPG--VTVASLYLPSGEVGTERQEQ 116

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                       + L++            ++ GD+N                        
Sbjct: 117 KYRFMDEFLTYLKELRERA---AAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLPEE 173

Query: 221 NDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKF 269
            +   + +D      +     +             +           IDY +        
Sbjct: 174 REWLSRVLDPADGGYVDVVRAQHAGVEGPYSWWSYRGRAFDNDTGWRIDYHMASAGLAGR 233

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++          +   +  +R SDH P+++ Y+
Sbjct: 234 ALKAEV-------ERAATHEERWSDHAPVTVTYE 260


>gi|312963318|ref|ZP_07777801.1| aminoacyl-tRNA hydrolase [Pseudomonas fluorescens WH6]
 gi|311282398|gb|EFQ60996.1| aminoacyl-tRNA hydrolase [Pseudomonas fluorescens WH6]
          Length = 258

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 84/298 (28%), Gaps = 53/298 (17%)

Query: 13  LVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           L+P   + A  +  +++ NI+                        LR+  +++ ADIVFL
Sbjct: 6   LIPVAPTAAITRFTVLTVNIHKGFTALNRRF----------ILPELREAVRSVGADIVFL 55

Query: 72  QEM-----GSYNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           QE+           +       +     S      + +           A+  K   V  
Sbjct: 56  QEIHGTHERHPQRYSDWPNMPQYEFLADSIWPQFAYGRNAVYPHGDHGNALLSKFQIVSY 115

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
            +  +  +        NR  +  ++ + G    V  I +                     
Sbjct: 116 DNLDISQSGH-----ENRGLLHCVLRLPGTGQEVHAICMHLGLR-----------EVHRQ 159

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           QQ + L+  I +   +  P V+AGDFN               +  +     F        
Sbjct: 160 QQLRLLEQRIRE-IPADAPLVVAGDFNDWRQRAD--------LSQSGLTEVFVHAHGKLA 210

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    + +D   +       L       +             LSDH P+S++ +
Sbjct: 211 RTFPARLPLLALDRIYVRN-----LKVHHPRVLNT------RPWSHLSDHVPLSVEVE 257


>gi|295661161|ref|XP_002791136.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Paracoccidioides brasiliensis Pb01]
 gi|226281063|gb|EEH36629.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Paracoccidioides brasiliensis Pb01]
          Length = 769

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/360 (10%), Positives = 85/360 (23%), Gaps = 75/360 (20%)

Query: 20  VAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +K   +S+N      +  +      +          LL    K  +ADIV LQE+   
Sbjct: 382 QNEKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLLLNEIKGYNADIVCLQEIDQG 441

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL- 131
           +       +  +  +         ++     +              K + + +       
Sbjct: 442 SYHGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQ 501

Query: 132 ---------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYS 178
                    G  D ++R   +  + ++      ++G+++ V+++HL        ++   +
Sbjct: 502 TAVRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQA 561

Query: 179 PSCSLLSQQAQWLKDWITQKKESLV---------------------------------PF 205
                   Q       I    +                                    P 
Sbjct: 562 AILMEEVTQLAEKYAKIPACIDKTAFRFSEPGNSTDGDGTATPAEPAPSVEYSSGSQIPL 621

Query: 206 VIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
           +I GDFN                  ++       +  +        F  +          
Sbjct: 622 IICGDFNSYPGSAVYELMNRGHLIEDHPDLEKRLYGNLSRLGMSYPFNLKSAYGAIGELE 681

Query: 246 NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             N        IDY            +     +               SDH  I  ++ F
Sbjct: 682 FTNYTPDFADVIDYIWYTSNALQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLAIMAEFSF 741


>gi|256026412|ref|ZP_05440246.1| hypothetical protein PrD11_00155 [Fusobacterium sp. D11]
 gi|289764427|ref|ZP_06523805.1| dnase I -like protein dhp2 precursor [Fusobacterium sp. D11]
 gi|289715982|gb|EFD79994.1| dnase I -like protein dhp2 precursor [Fusobacterium sp. D11]
          Length = 278

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 97/306 (31%), Gaps = 37/306 (12%)

Query: 1   MIRKYVLALVF--FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           M +  +L+++F  F +  T S+A +  + S+NI  L                  D     
Sbjct: 1   MKKGKLLSIIFALFFILSTLSLADEAYIASFNILRLGA-------------AKKDMVQTA 47

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVR 117
           +  K    DIV L E+ + + V ++  +         +  I+     S+    + A   +
Sbjct: 48  KILKGF--DIVGLVEVINRDGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYVYK 105

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           K  V+ ++        K S      R       +I       + +H              
Sbjct: 106 KDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------NN 153

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                  + +   + ++   + E      IAGDFN       +    +K  D     I  
Sbjct: 154 ESQRKAENYKMVDVYNYFQDRDEKENDIFIAGDFNL-YALDESFRPLYKHADKITYAIDP 212

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +         N       D F   Q   +     S   + ++ D+ K   + +SDH P
Sbjct: 213 AIKTTIGAKGRANSY-----DNFFFSQKYSQEFTGSS-GALDFSGDNPKLMREIVSDHIP 266

Query: 298 ISIDYD 303
           + I  +
Sbjct: 267 VFIVVE 272


>gi|149278217|ref|ZP_01884355.1| exodeoxyribonuclease III [Pedobacter sp. BAL39]
 gi|149230983|gb|EDM36364.1| exodeoxyribonuclease III [Pedobacter sp. BAL39]
          Length = 256

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 91/304 (29%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++++S+N+N +      +                  + + +DAD+V LQE+ +  + + +
Sbjct: 1   MKIISYNVNGIRSASTKNFLG---------------WLQAMDADMVCLQEVKALPSQIPE 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +        ++                 ++ +A+  +       ++   G  + +     
Sbjct: 46  LLVLIEQLGYHHYWFPA-------EKKGYSGVAILTRIKP----NHVEYGCGEEWIDKEG 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +  +     ++ +++ S    D  +              + L+  I       
Sbjct: 95  RI-----LRADFDTFSLMSLYMPSGSSGDERQTKKYEFMRFFDTYTEQLRKEI------- 142

Query: 203 VPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNAN 248
              +I+GD+N     +  ++                W  +  N+  I   +  +   +  
Sbjct: 143 PNLIISGDYNICHTAIDIHNPKSNANSSGFLPEEREWMELFLNNGFIDTFRHFNKDPHHY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY +        L   +      +           SDHCP+ 
Sbjct: 203 TWWSFRAGSRSKNLGWRIDYHLATVPMLDRLKNVTILADAVH-----------SDHCPVL 251

Query: 300 IDYD 303
           ++ +
Sbjct: 252 LELN 255


>gi|254302413|ref|ZP_04969771.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322605|gb|EDK87855.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 253

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 79/301 (26%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                 +       Y    +ADI  LQE    +A    
Sbjct: 1   MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                         + ++   ++   
Sbjct: 91  -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMVWEDEFRKYLKNLEKKK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +  +  +  F     +     
Sbjct: 138 PVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +   K L+                     SDHCP+ 
Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIH-----------SQIEGSDHCPVV 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|261878952|ref|ZP_06005379.1| AP endonuclease domain protein [Prevotella bergensis DSM 17361]
 gi|270334463|gb|EFA45249.1| AP endonuclease domain protein [Prevotella bergensis DSM 17361]
          Length = 364

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 78/291 (26%), Gaps = 39/291 (13%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                 ++++S+N+   +  E      N           + +Y K  DADIV LQE  + 
Sbjct: 95  EPPKDAIKVLSYNVWLFAGWEDGKNDPNP----------ILEYIKKQDADIVCLQESDNN 144

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +        I+           + +   I++   +  K     +    L  A    
Sbjct: 145 EVGKEKLDSALGPIY--QYCDTAKRGKGNTISIYSKYPILSKEHIEYESRGNLSAAFKLM 202

Query: 138 SRAGNRRAVELLVEINGKKI-------WVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQ 189
                   V   +E  G  +        ++   +K+      S         +   + AQ
Sbjct: 203 IDGEEVLVVNNHLETTGLTVEEKSEFKTMIKGEMKAGKAESTSRHLVSKLGKASAIRAAQ 262

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                        +P ++ GDFN       +                + +  +    +  
Sbjct: 263 AQAVARYIAYHCDMPIILCGDFNDSPISYAHRTI------AEGLTDCYVETANGPGISYH 316

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +    + ID  +   +   F  +                    SDH PI  
Sbjct: 317 HNGFYVRIDNIMCSAHFKPFACRVDNEIKN-------------SDHYPIYC 354


>gi|221120309|ref|XP_002161039.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair
           enzyme) 1 [Hydra magnipapillata]
          Length = 384

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 82/307 (26%), Gaps = 70/307 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79
            +++ SWN+  L      +                  Y    D D++ LQE     +   
Sbjct: 119 TLKICSWNVAGLKAWVNKNG---------------LNYVIKEDPDVLCLQETKCTENDLP 163

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +  KN   +   +         ++    ++ +++  K   +       +   DS  R
Sbjct: 164 GQVLQMKNGPKVTNVSNSGYYMYWCNAEKKGYSGVSLWCKLKPLKVTYGLGIKEHDSEGR 223

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                     +    +K +++  ++ +        +      +        L        
Sbjct: 224 L---------ITAEFEKYYIITTYVPNSGQKLIRLDYRRIWNTDYKNYVGEL-------- 266

Query: 200 ESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           +   P ++ GDFN                           +  +  +  +  F K    +
Sbjct: 267 KKKKPVIMCGDFNVAHTEIDIANPNSNKRNAGFTEEERSDFTALLEDGYIDTFRKLNPEK 326

Query: 245 CNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             A                  +DYF++ ++    +        +             SDH
Sbjct: 327 TGAYTFWTYMMNARSKNKGWRLDYFIVTKDIEDDICDSVIRSSV-----------MGSDH 375

Query: 296 CPISIDY 302
           CPI ++ 
Sbjct: 376 CPIVLNL 382


>gi|86145133|ref|ZP_01063464.1| hypothetical protein MED222_04430 [Vibrio sp. MED222]
 gi|85836710|gb|EAQ54830.1| hypothetical protein MED222_04430 [Vibrio sp. MED222]
          Length = 347

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/336 (10%), Positives = 86/336 (25%), Gaps = 59/336 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +   ++N+    E            S          + +   +LD D++  QE+ S  ++
Sbjct: 7   ITFATFNLLNYLEPPNAYYDFENIYSFDEWQKKQHWMAEAISSLDCDVIGFQEIFSPQSL 66

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
            ++  +  +  +++     +             IA R     V   +     L       
Sbjct: 67  EQLMNELGYP-YFAVVDSADVEDDYLYTSPVVGIASRYPIENVQPVTPDSKLLTAFNLGD 125

Query: 138 SRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCS------------ 182
           + + NR  V   + +        +V+    +      +       +              
Sbjct: 126 NFSFNRTPVHATITLPHLGSTDCYVVHFKSQRPTEPKAESIDVDNAQQGEKSQSDTLTRF 185

Query: 183 ------------LLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTI 228
                           +AQ L  +I   + ++  P V+ GDFN+ +          +   
Sbjct: 186 HQEQLGSWLSSVQRGLEAQMLHQYITNHRYQTDQPVVLMGDFNKPLFNDEFKGLLSYSIN 245

Query: 229 DPNDSLIRFPKEKDSRCN-----------------ANKNLRNKIPIDYFVMDQNAYKFLI 271
              +S       +                       +    +   +DY +M         
Sbjct: 246 RDENSKHWLSHFRLKDSWDIYHQLHEQDLLEQRKPTHYYGASGSVLDYILMSNEFDCQNS 305

Query: 272 QESFSEILYNEDD------IKSRGKRLSDHCPISID 301
                   Y   D           +  +DH  +++ 
Sbjct: 306 SSMMEISCYTVLDHHLINPSFEHDQFSTDHAIVAVT 341


>gi|293368711|ref|ZP_06615316.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292636176|gb|EFF54663.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 361

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 67/305 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+ + +  E                  +  Y  + +ADI+ LQE  +     
Sbjct: 99  GSIKILSYNVMSFNNLEKKDGKNP-----------VLSYLVDSNADIICLQEYNTATNKK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  ++      +      H +          +A   K   +           +   +  
Sbjct: 148 YLTEQDIKKALKAYPYQSVHQQG----KGDVQLACFSKFPILSIHPIEYESNYNGSMKY- 202

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
                  ++ +N   + +++ HL+S          Y                        
Sbjct: 203 -------VLNVNNDTLTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLA 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ + QA  +   I   K      ++ GDFN   +    +    + +D       F 
Sbjct: 256 EASAIRASQADSVAKAIAACKYPTT--IVCGDFNDG-SISYTHRILTQKLDD-----AFT 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  N   +             +    R  + SDH PI
Sbjct: 308 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 354

Query: 299 SIDYD 303
                
Sbjct: 355 WCYIS 359


>gi|255101285|ref|ZP_05330262.1| putative endonuclease/exonuclease/phosphatase [Clostridium
           difficile QCD-63q42]
          Length = 209

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 86/276 (31%), Gaps = 70/276 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V++NI+   +                  T +  Y K LD D++ LQE+     +A  
Sbjct: 1   MKIVTYNIHKCMDSNN-----------RLTLTKMGLYLKQLDCDVICLQEVLYPQFLALK 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N   +F +  + +N                                     S+   R
Sbjct: 50  AVLNMDGVFATNVKKVNMIYG---------------ICTFTTSKMLNSNHFFLTSKKEQR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+ + ++  G+ I V++ HL                     ++A+ L + I  +   + 
Sbjct: 95  GALCITIDAYGRIINVINTHLGLD----------------RQERAKQLDEIIDYRNRLVG 138

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++ GDFN K  +L   +D   +++                      ++   IDY  ++
Sbjct: 139 IVILCGDFNEKNVFLSMFNDMAISLNK--------------SYLPTFEKSNSRIDYIFVN 184

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +N                          LSDH P+ 
Sbjct: 185 KNTELK--------------GYTVEKIYLSDHYPVI 206


>gi|166710239|ref|ZP_02241446.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 259

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 85/305 (27%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWN+N+L+                     L+Q+      ++V +QE  +  +    
Sbjct: 1   MKIASWNVNSLN----------------VRLPHLQQWLTAFAPEVVGIQETKLEDHRFPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +   +                 +  +A+  ++  +  Q          F    
Sbjct: 45  AALAELGYRSVFC------------GQKTYNGVAILSRSPALDVQ-----MGIPGFDDVQ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +       + ++++++ +   + + +  Y        +      DWI Q+ ++
Sbjct: 88  QRVIAATV-----DGVRIINLYVVNGQDVGTDKYAYK------LRWLAAAHDWIAQELQT 136

Query: 202 LVPFVIAGDFNRKINYLGNNDDF----WKTIDPND-----------SLIRFPKEKDSRCN 246
               V+ GDFN   +    +D         +   D            L    +       
Sbjct: 137 YPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALEKLLALGLHDAFRLHTQDAE 196

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID  ++        ++          D      +R SDH P
Sbjct: 197 HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHAP 249

Query: 298 ISIDY 302
             +  
Sbjct: 250 AWVRL 254


>gi|53714586|ref|YP_100578.1| hypothetical protein BF3300 [Bacteroides fragilis YCH46]
 gi|52217451|dbj|BAD50044.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 378

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 92/342 (26%), Gaps = 57/342 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++A  F L+      AQ        +  +N+  L +    +   +           
Sbjct: 40  MKKLIIAFNFLLLLAVGGRAQDHADRLYSVAFYNLENLFDTIHDTGKNDYEYLPDAAKGW 99

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           + ++  S    L +    L  D        + + E+ +   +  +  +       +    
Sbjct: 100 NSEKYRSKLKNLSKVLGELSRDKVPAGPAAIGVAEVENRRVLDDLIRQPE---LAAGGYR 156

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H +      I  A+    K       +  L    +  +    R  + +  E+ G K+W
Sbjct: 157 YIHYEGPDKRGIDCALLYDPKQFTPHATALVLSTPFEGDTIHKTRGFLIVGGELAGDKVW 216

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           ++  H  S    + +           + Q + LKD + +  +  +  +I GD N     L
Sbjct: 217 LIVNHWPSRGAAEPVRV-------HAAMQVKALKDSLMRT-DPDLKLIIMGDLNDDPMDL 268

Query: 219 GN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                          + +     +   +D               D  ++     +     
Sbjct: 269 SLAVLGAKKHVEDMTEDDLYNPWWVTLEDKGVGTLLYRGKWNLFDQIILSSTLLQATKGL 328

Query: 274 SFSEI------------------LYNEDDIKSRGKRLSDHCP 297
            +                            +      SDH P
Sbjct: 329 KYDHNEVFMRDYLFQQDGKYKGAPLRTYGGRVWLDGYSDHLP 370


>gi|118375590|ref|XP_001020979.1| exodeoxyribonuclease III family protein [Tetrahymena thermophila]
 gi|89302746|gb|EAS00734.1| exodeoxyribonuclease III family protein [Tetrahymena thermophila
           SB210]
          Length = 396

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 90/307 (29%), Gaps = 71/307 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79
           Q +++  WN+N L              R       L++Y K  + DI+ L E  +   N 
Sbjct: 115 QNIKIACWNVNGL--------------RAVLKREDLQKYIKQENPDILCLNETKIDESNF 160

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + +   K+    +Y                 ++ +++  K   +  +    +   ++  R
Sbjct: 161 IKEKVYKDIPSGYYQYWNF-----CIPPIKGYSGVSIFSKEKVISIKKGIDIAEHENEGR 215

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                    ++     K +++ +++ +        +    S        +  ++++ Q K
Sbjct: 216 ---------VLTAEFDKFYLVVVYVPNAGSELVRLDYRVNSFD------KDFQNYLNQLK 260

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRC 245
                 ++ GD N     +   +       P                  I   +      
Sbjct: 261 LKKN-VILCGDLNVAHQEIDIANPKSNRNSPGFTIEERNSFSKFLESGWIDTFRFLYPET 319

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDYFV+++     +     +  +Y            SDHC
Sbjct: 320 IKYSWWSVRTKARESNIGWRIDYFVVNKEFKSSIKDSMINNNIY-----------GSDHC 368

Query: 297 PISIDYD 303
           P+    +
Sbjct: 369 PVEFILN 375


>gi|302787589|ref|XP_002975564.1| hypothetical protein SELMODRAFT_103806 [Selaginella moellendorffii]
 gi|300156565|gb|EFJ23193.1| hypothetical protein SELMODRAFT_103806 [Selaginella moellendorffii]
          Length = 306

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 92/310 (29%), Gaps = 65/310 (20%)

Query: 15  PCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           P +    + + +++SWN+N L                  + ++L + A + D D++ LQE
Sbjct: 28  PSSPPSEKNLVKVISWNVNGLRA------CMKRKNELEEEGSVLARLANSEDFDVLCLQE 81

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                   +   +     + ++          S+   ++  A+  +   V       +  
Sbjct: 82  TKLQEKDVEAIKQKILGGYSNSFWT-----CSSSKLGYSGCALISRIKPVSVTYGLGISQ 136

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLK 192
            D   R         +V       +++ +++ +    L+ L    +      S     L+
Sbjct: 137 HDGEGR---------VVTAEFDTFFLVSVYVPNSGQRLERLTYRTTEWDPAFSTYLLELE 187

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRF 237
                      P ++ GD N     +   D                 ++T   +  L+  
Sbjct: 188 KR--------KPVIVTGDLNCAHEEIDIYDPDGNKRSAGFTCEERTSFQTNFIDKGLVDT 239

Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
            +++            +           +DYF++ Q     +            D     
Sbjct: 240 FRKQHPLAVGFTYWSYRSNARPQNKGWRLDYFLVSQGLVSNVA-----------DSYVLP 288

Query: 289 GKRLSDHCPI 298
               SDHCPI
Sbjct: 289 QLDGSDHCPI 298


>gi|297199538|ref|ZP_06916935.1| predicted protein [Streptomyces sviceus ATCC 29083]
 gi|297147430|gb|EFH28625.1| predicted protein [Streptomyces sviceus ATCC 29083]
          Length = 371

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 83/277 (29%), Gaps = 25/277 (9%)

Query: 39  GVSLWKNSVKRTTSDYT-----LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY 93
           G S W   V+    D          +    +DAD++   E+    A+ + F         
Sbjct: 107 GRSAWAGWVELGQDDLDLDTVRNTGRVVSEVDADVLLTVEVEDRLALER-FNSQVLAGAL 165

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-LGAKDSFSRAGNRRAVELLVEI 152
                      D N+     I +  +      +++           R  +R   E  + +
Sbjct: 166 GRRPYPYALLIDGNDSRGIDIGIFSRYPITSLRTHIFETNPNRPDERLFSRDCPEFEIRL 225

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           NG  + +L  HLKS    D          +L   QA+ + +      E     ++AGD N
Sbjct: 226 NGTPLVILGNHLKSKSNDDP---------ALRLAQARRVAEIYRAALERTPHVIVAGDLN 276

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
              +           +    S   + +              +  IDY +M    ++ +  
Sbjct: 277 DFPSSDSVATLEGAGLRDAMSHRSY-RGLPGTFKP--CQSERDKIDYLLMSPEVWQEVQH 333

Query: 273 ESFSEILYNEDDIKSRG------KRLSDHCPISIDYD 303
                     D IKS           SDH  + +D D
Sbjct: 334 VGLETRGICADGIKSFDTVTSPIDAASDHAALYMDVD 370


>gi|119485593|ref|ZP_01619868.1| hypothetical protein L8106_24460 [Lyngbya sp. PCC 8106]
 gi|119456918|gb|EAW38045.1| hypothetical protein L8106_24460 [Lyngbya sp. PCC 8106]
          Length = 258

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 81/284 (28%), Gaps = 31/284 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V++N+       G + W            ++ Q     DAD+V  QE  ++  +   
Sbjct: 1   MKIVTFNVRFDKPDPGNNAWV-------WRRQVMAQLMAEWDADLVGTQEGKAHQLLDLH 53

Query: 84  FPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              + +       +                   ++  +  + +    +      +     
Sbjct: 54  RRLSNYQTVGVDRQGNGLSEYCAIFYHQQRWRCLKTGDFWLSKTPKLVGSVTAEWENPVP 113

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     + E  G+   ++  +                S       AQ + D ++Q     
Sbjct: 114 RMVSWGVFEGVGQDKPIIIFNTHFDYH----------SQRARELSAQLISDRLSQFNADE 163

Query: 203 VPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
             F++ GDFN + +              +   D+L     ++    +          +D 
Sbjct: 164 YLFIVTGDFNAEPDSFTRKTLLKPLTNGVVLCDTLADIDLDEQMTYHEFTGKGF-AAVDT 222

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              D       +    ++I Y            SDH P+   ++
Sbjct: 223 IYYDSRLNLHQVSVDRTQIDYV---------WPSDHFPVIAQFN 257


>gi|262198814|ref|YP_003270023.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365]
 gi|262082161|gb|ACY18130.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365]
          Length = 260

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 69/303 (22%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    +  + +    DIV LQE+         
Sbjct: 1   MKIATWNING----------------MRARLDFVLHWLRARQPDIVGLQELKLTED---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y     + +            +AV  +    L  +      +        R
Sbjct: 41  ------QFPYDALSELGYHAVVVGQKAWNGVAVLSREPAELVHAGLPGQDELGARLVCVR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A            +                         L  Q   L +       +  
Sbjct: 95  VADMA---------FTTAYCPNGKSTSHPDFLRKLGWFDALIGQLGTLSEVAGASAGA-- 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GDFN                   +     + ++ I  +  +  F +       A 
Sbjct: 144 --VLCGDFNLCPTPLDSYNEDLLRGSIFHTDAERERYQRILDHGFVDLF-RAAHPEERAF 200

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +   +      +         + D  +     SDH P+ 
Sbjct: 201 SWWDYRGGAFHKRQGLRIDFVLGTADIAARTERVEIDRTYRKKHDGLT----ASDHAPVI 256

Query: 300 IDY 302
            + 
Sbjct: 257 AEL 259


>gi|160915303|ref|ZP_02077516.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991]
 gi|158433102|gb|EDP11391.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991]
          Length = 252

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N +                         + + +DADI  +QE          
Sbjct: 1   MKLVSWNVNGIRACMKKGFM---------------DFFQAIDADIFCIQETKMQPG-QLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  + ++          ++   ++ + V  K   +       +   D   R    
Sbjct: 45  IETDGYVQYMNS----------ADKKGYSGVMVFSKKEPLSVSYGLGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       +++ ++  +        +             Q L        +   
Sbjct: 91  -----VITCEYDTFYLVCVYTPNSKDGLLRLDYRMQWEDAFRAYLQRL--------KESK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                         +   T+  +  +  +      + N  
Sbjct: 138 SVVVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREKMTTLLSSGFVDSYRYLYPDKENVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++A + + +      +Y            SDHCP+S
Sbjct: 198 SWWSYRFSAREKNAGWRIDYFLVSEDAKERIEEAQIHTDIY-----------GSDHCPVS 246

Query: 300 IDY 302
           + +
Sbjct: 247 LSF 249


>gi|119470140|ref|ZP_01612906.1| hypothetical protein ATW7_13643 [Alteromonadales bacterium TW-7]
 gi|119446561|gb|EAW27835.1| hypothetical protein ATW7_13643 [Alteromonadales bacterium TW-7]
          Length = 394

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/352 (10%), Positives = 93/352 (26%), Gaps = 72/352 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++++ ++N+    E              ++       + +Y      D++  QE+ S  +
Sbjct: 41  ELKIATFNLFNYLEPPNAYYEFERIYTAEQWARKQRWITEYINEQQPDVIGFQEIFSIES 100

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL---LGAKDS 136
           + ++     +   ++     +             IA +   V V+   +          +
Sbjct: 101 LKELMLNQGYN-HFAVVDKPHVIDDFIFKHPVVGIASKYPIVDVIAVEHDEELACSLGLT 159

Query: 137 FSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW--- 190
            + + +R+ +   V +        +V+    K         N    +   +    +    
Sbjct: 160 QAFSFSRKVLRATVTLPHLGDTDCYVVHFKSKRGMLEVDEHNKAVTAEQNIIDILKANVA 219

Query: 191 ----------------LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------ 228
                           +   IT+++ +  P V+ GDFN  +     N     T+      
Sbjct: 220 GSWGSTIQRGSEATLLMIQMITRREATQNPMVLMGDFNNDLADGVLNHLLTNTLRFAPAM 279

Query: 229 -------------------------------DPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                                            +D          +R   +    +   +
Sbjct: 280 DAKAYLAKYCLYDSWALFEKLVITADDAQQASNSDGENTAQTAPLTRKATHYFGTSSSVL 339

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCPISIDYD 303
           DY ++            F    +N  D         R    +DH  + I  +
Sbjct: 340 DYILLSCEFDPSYDDSFFEVSNHNTYDRHLINPEYERDDLTTDHGVVCITLN 391


>gi|327438448|dbj|BAK14813.1| exonuclease III [Solibacillus silvestris StLB046]
          Length = 252

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                         Y + +DAD   LQE         +
Sbjct: 1   MKFISWNVNGIRACVNKGF---------------LDYFREMDADFFCLQETKCQVGQIDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  ++S                ++  AV  K+  +        G ++  +    R
Sbjct: 46  QLEGYYQYWHSAV-----------KKGYSGTAVFTKHEPLAV----YYGIENEIAADEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++++ +  +     +           +    + L        ++  
Sbjct: 91  I-----LTLEYENFYLVNTYTPNAKRDLTRLEERLLWEDRMRIYLKEL--------DAKK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N   + L                        +  +     F        +  
Sbjct: 138 PVIYCGDLNVAHSELDIKNVKSNIGNSGFTYEERGKMTDLLTSGFTDTFRHFHPDVTDHF 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++     + + + S    +             SDHCPI 
Sbjct: 198 TWWSYMAKVRERNIGWRIDYFIISDRLVEKVEEASIHSEIL-----------GSDHCPIV 246

Query: 300 IDY 302
           +  
Sbjct: 247 LKL 249


>gi|325479409|gb|EGC82505.1| exodeoxyribonuclease III [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 273

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 82/304 (26%), Gaps = 56/304 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++L+        +  + R       + +  K  DAD++ LQE     +    
Sbjct: 1   MKFISWNIDSLNAALTSDSNRAVMSR------EVLETIKREDADVIALQETKLPKSGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K     F+     +     +     +       K    + +++P + A  +    G  
Sbjct: 55  KHKEKLAEFFPDYDYVWTCSCEGARKSYAGTMTLYKKGLDVTETFPKIDAPGTMDFEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V +     +   ++  +                  +   + L            
Sbjct: 114 -----IVTLEFDDFYFTQVYTPNAGNGLVRLADRQIWDEKYADYLEGLDKI--------K 160

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                   +     + +  +        F         A 
Sbjct: 161 PVIASGDFNVAHTPIDLAHPENNHISPGFTDEEREGFTRLLARGFTDTFRHLNKDLEGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++     + +   +       +           DH PI
Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFLVSDRLMERVKSSTIINSGDRQ-----------DHTPI 269

Query: 299 SIDY 302
            ++ 
Sbjct: 270 MLEI 273


>gi|288916264|ref|ZP_06410643.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
 gi|288352243|gb|EFC86441.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
          Length = 818

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 90/335 (26%), Gaps = 77/335 (22%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQE 73
                   + + ++N+  L+  +             + +  L +         DI+ L+E
Sbjct: 480 TPPKKTGDLSIATYNVENLTAGDS-----------DAKFARLAEAVVVNLGKPDILALEE 528

Query: 74  MGSYNA-----------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----- 111
           +   N                   A V        + S              +I      
Sbjct: 529 IQDNNGTVDDGVVAADQTVARFIAAIVAAGGPTYDWRSINPNDGTDGGAPGGNIRQVFLF 588

Query: 112 ----------------TAIAVRKKNVR---VLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                           TA++V K       V   + P      S + + +R+ +      
Sbjct: 589 NPARTTFVDRPGGDANTAVSVLKVRPTSNQVYLSASPGRINPTSSAWSTSRKPLVGEFLY 648

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTY-----SPSCSLLSQQAQWLKDW---ITQKKESLVP 204
           +G K   +  +  +    D   +         S +  + QA  ++++   +  K  +   
Sbjct: 649 DGDKQLFVVANHFNSKGGDYPLSAAVQPPVRSSEAQRTSQATEVRNFVADLAAKSGNAAR 708

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            V+ GD N              T+  N +L          +   +     N   +D+ ++
Sbjct: 709 VVVLGDINDYQFSP-----TLATLTDNGALLKPLINDLPVNERYSYVFDGNSQTLDHILI 763

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +          +++        + SDH P
Sbjct: 764 SPTIKGYSYGVVHVNAEFSD--------QASDHDP 790


>gi|212212637|ref|YP_002303573.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii CbuG_Q212]
 gi|212011047|gb|ACJ18428.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii CbuG_Q212]
          Length = 255

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 89/296 (30%), Gaps = 55/296 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                     ++S+NI+                        +R+  + +DADIV LQE+ 
Sbjct: 3   SLTPKRDAFTVLSYNIHKGFSARYRRFV----------LPDIREALRAIDADIVLLQEVQ 52

Query: 76  SYNAVAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             +  +++             I  S      + K       H   A+       + ++  
Sbjct: 53  GKHRKSRLKKFAHADLPQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENIN 112

Query: 130 LLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           +     S S+  +R  +  +++     ++ V+ IHL  F              +    Q 
Sbjct: 113 V-----SLSQRASRSILHAIIDYEPTVELHVICIHLGLF-------------RAERDYQL 154

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L   I     S    +IAGDFN      G  +   K ++  +       +        
Sbjct: 155 ITLSKRIEAHVPSHASLIIAGDFNDW--RRGAFNYMEKELELKEVYKVLEGKHAKT---- 208

Query: 249 KNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ++  +  D           L   S           +S  K+LSDH P+   +
Sbjct: 209 -YPASRATLEVDRIYYRG-----LKLLSGEIFN------ESYWKKLSDHLPLHAKF 252


>gi|90421802|ref|YP_530172.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18]
 gi|90103816|gb|ABD85853.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18]
          Length = 270

 Score = 81.5 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 71/306 (23%), Gaps = 65/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L +WNIN                       L+ ++ ++   D++ LQE          
Sbjct: 3   FSLSTWNIN----------------SVRLRIDLVAKFLESERPDVLCLQETKCP---DDA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +       RL       +    +  +A+  +               DS       
Sbjct: 44  FPLKRFK------RLGYEHVALNGQKGYHGVAIISRLPFASTDVRIFCENLDSRH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +          ++  +       D  +   +P           +K       +   
Sbjct: 93  --ISVAFAAEHTSAPLVLHNFYVPAGGDIPDPELNPKFKHKLAFLDEMKSCEPLHPQGDA 150

Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
             ++ GD N   +     ++    K +                   L    +        
Sbjct: 151 RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPIECEKLLAAQHQGGWLDVARERIALSDKI 210

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +                 Y         +R SDH P
Sbjct: 211 YTWWSYRAADWTIANRGRRLDHIWVSPAL-------GPCVQDYQVTRDARGWERPSDHVP 263

Query: 298 ISIDYD 303
           +++  +
Sbjct: 264 VTVTME 269


>gi|320037679|gb|EFW19616.1| endonuclease/exonuclease/phosphatase [Coccidioides posadasii str.
           Silveira]
          Length = 290

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 87/289 (30%), Gaps = 21/289 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        K   +R       L  + ++     + LQE+        
Sbjct: 8   SIRILTHNIRY-ATSRPFKGEKPWPERKHLVLNELIFHTRHNAESFICLQEVLRVQLEDV 66

Query: 83  VFP----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +       +TW            +   S       +   +    V     P + +K  + 
Sbjct: 67  LSGLNSHGDTWAYIGVGRDDGKQAGEYSPIFYRPDVWKLETWETVWLSETPEVPSK-GWD 125

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A  R     +      +  VL +        D    +   S  L+    + +  ++ + 
Sbjct: 126 AASIRIVTVGVFRHRASRKTVLAMTTHL---DDQGSGSRYESAKLI---LRTIDGYLHKF 179

Query: 199 KESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANK-NLRNK 254
           K+ +    +AGDFN ++N        D     +D  D +    +  +            +
Sbjct: 180 KDRISGLFLAGDFNSEVNQEAYQVFIDPTSPLVDARDQIKPDERYGNEITYTGFGYEGER 239

Query: 255 I-PIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISID 301
              IDY ++     +      ++   Y    +    G   SDH  +  D
Sbjct: 240 ETRIDYILVGPKTEQGF---PWTVKQYGVLPNKFDDGVFSSDHRAVVAD 285


>gi|308274119|emb|CBX30718.1| Exodeoxyribonuclease [uncultured Desulfobacterium sp.]
          Length = 263

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 74/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L        + +                + ++ DIV +QE        K+
Sbjct: 7   IKLVSWNVNGLRAIIQKDFFGS---------------IQRMNPDIVAIQE-------TKL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S E   ++    +    ++ +A   +      +        D   R    
Sbjct: 45  QEHQRTDKMLSFEDYNSYWSYSTVKKGYSGVATFTRIAPQNVKEGIGNPGYDEEGRI--- 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E +       +++  +    D                      +    K    
Sbjct: 102 ------LETDFGDFIFFNVYFPNGQMGDDR-------LQYKLNFYNDFFAYTDSLKNQGK 148

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I+GD+N   N +                   D   + I      +   +        
Sbjct: 149 NLIISGDYNTAHNEIDLTHPKPNEKYSGFLRVERDWMDEIIKRG--YVDTFRYFYPEKVK 206

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           +DY  + +N              + ++         SDHCP+
Sbjct: 207 YSWWSYRANARKKNVGWRVDYIFVSRNIIDK---------GWVKEPFIDNDIFGSDHCPV 257

Query: 299 SIDYDF 304
            +  +F
Sbjct: 258 GLVLEF 263


>gi|326775686|ref|ZP_08234951.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1]
 gi|326656019|gb|EGE40865.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1]
          Length = 259

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 79/304 (25%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N                  T+    L  + ++   D++ +QE          
Sbjct: 1   MRIATYNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCTAE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   ++   +       +A+  +       +  L    +       R
Sbjct: 41  ------QFPAEALREAGYASAVNATGRWNGVALLSRVGLSDVVTG-LPDGPEYEGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + +  +++ +   ++     Y        +  + L+  +       +
Sbjct: 94  A-----ISATCGPLRLWSVYVPNGREVEHAHYAYK------LRWLEALRKAVAADAAKAL 142

Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248
           PF + GDFN         D                    ++        P+       A 
Sbjct: 143 PFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERVALAALEAEGLSEVHPRPLKYD-RAY 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID    +      +            D  + +GK  SDH P+ 
Sbjct: 202 TFWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYV-------DREERKGKGASDHAPVV 254

Query: 300 IDYD 303
           +D D
Sbjct: 255 VDLD 258


>gi|302345268|ref|YP_003813621.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149592|gb|ADK95854.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 324

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/321 (10%), Positives = 85/321 (26%), Gaps = 50/321 (15%)

Query: 20  VAQKVRLVSWNINTLSE-------QEGVSLWKNSVKRTT----SDYTLLRQYAKNLD--- 65
              ++ +V  N   L +        +   L  +    T          + Q         
Sbjct: 18  AQTRLTIVELNTENLFDTRHDTLKNDYEFLPDSPRHWTRTKYWQKLNRIGQTIIACGEDS 77

Query: 66  -----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 DIV L E+ + + +  +  ++        +    +    SN+     +A+    
Sbjct: 78  SGWTLPDIVGLCEVENDSVLFDLTRRS-----LLRKARYEYVMTASNDARGIDVALLYSP 132

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179
                     +           R  + +  EI +G  + V  +H  S    +        
Sbjct: 133 FSFRLIKADTIRVIPMKEMRPTRDILHVEGEIESGDTLHVFLLHAPSRMGGELY------ 186

Query: 180 SCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           S        + L+  I   +   +    ++ GDFN   +       +   +     +   
Sbjct: 187 SRPFRMHVMERLRSAIDSLRSAYTDPKLLVMGDFNDYADSPSLQLAYEYGLIN---ISAG 243

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------------NED 283
              ++      +       +D  ++  N   ++     ++  +                 
Sbjct: 244 VHGRNGAKGTYRYHGEWGSLDQILVSVNLRSWVTDCRINDAPFLLEEDTKYGGVKPRRNY 303

Query: 284 DIKSRGKRLSDHCPISIDYDF 304
           +        SDH P+ +   +
Sbjct: 304 NGMRFNNGFSDHLPLVLRLQY 324


>gi|218189226|gb|EEC71653.1| hypothetical protein OsI_04096 [Oryza sativa Indica Group]
          Length = 499

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 89/313 (28%), Gaps = 70/313 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +   + ++++SWN+N L        +             + Q A+  D DI+ LQE 
Sbjct: 230 PSLSKDTKALKILSWNVNGLKALLKSRGF------------SIHQLAQREDFDILCLQET 277

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +V  +     +  +           +   ++  A+  +   +  +    +   
Sbjct: 278 KMQEKDVEVIKEGLLEGYTHSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGVPDH 332

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
           D+  R         +V +     ++L  ++ +    L  L    +     L    + L+ 
Sbjct: 333 DTEGR---------VVTVEFNDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKDLEK 383

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238
                     P ++ GD N     +  +D                           +   
Sbjct: 384 --------SKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTIEERESFETNFLSKGFVDTF 435

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +++            +           +DYF++ ++  + +            D      
Sbjct: 436 RKQHPNVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERVH-----------DSYIIPD 484

Query: 290 KRLSDHCPISIDY 302
              SDH P+ +  
Sbjct: 485 ISASDHSPLGLVL 497


>gi|163787138|ref|ZP_02181585.1| exodeoxyribonuclease [Flavobacteriales bacterium ALC-1]
 gi|159877026|gb|EDP71083.1| exodeoxyribonuclease [Flavobacteriales bacterium ALC-1]
          Length = 253

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 90/303 (29%), Gaps = 72/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+N+N +                         + K  D D++ LQE+       K 
Sbjct: 1   MKIVSYNVNGIRAAINRGF---------------IDWLKATDPDVICLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +S      +    +    ++ +A+  K     + ++   G          R
Sbjct: 39  MEEQLDLSLFSDAGYGYNYWFSAQKKGYSGVAILCK----SKPNHIEYGTGIESMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + ++   + V+ ++L S               +   +    + +++   ++   
Sbjct: 95  N-----IRVDYDNVSVMSMYLPSGTND--------ARLAHKFEYMDLIHEYLNNLQKEKS 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP-------------NDSLIRFPKEKDSRCNANKN 250
             V+ GD+N     +  ++   K +               +   I   +    +      
Sbjct: 142 NLVVVGDYNICHEAIDIHNPKMKGVSGFLPEEREWLGNFIDSGFIDSFRYLHPKRQEYSW 201

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           +DY +  +   + + +        +           SDHCPI ++
Sbjct: 202 WSYRANSRANNKGWRLDYAMASKPLQENIKRSVILTEAVH-----------SDHCPILLE 250

Query: 302 YDF 304
            +F
Sbjct: 251 LEF 253


>gi|115440515|ref|NP_001044537.1| Os01g0801000 [Oryza sativa Japonica Group]
 gi|55296319|dbj|BAD68137.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
           sativa Japonica Group]
 gi|55297696|dbj|BAD68286.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
           sativa Japonica Group]
 gi|113534068|dbj|BAF06451.1| Os01g0801000 [Oryza sativa Japonica Group]
 gi|215715310|dbj|BAG95061.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222619408|gb|EEE55540.1| hypothetical protein OsJ_03774 [Oryza sativa Japonica Group]
          Length = 499

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 89/313 (28%), Gaps = 70/313 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +   + ++++SWN+N L        +             + Q A+  D DI+ LQE 
Sbjct: 230 PSLSKDTKALKILSWNVNGLKALLKSRGF------------SIHQLAQREDFDILCLQET 277

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +V  +     +  +           +   ++  A+  +   +  +    +   
Sbjct: 278 KMQEKDVEVIKEGLLEGYTHSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGVPDH 332

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
           D+  R         +V +     ++L  ++ +    L  L    +     L    + L+ 
Sbjct: 333 DTEGR---------VVTVEFNDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKDLEK 383

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238
                     P ++ GD N     +  +D                           +   
Sbjct: 384 --------SKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTIEERESFETNFLSKGFVDTF 435

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +++            +           +DYF++ ++  + +            D      
Sbjct: 436 RKQHPNVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERVH-----------DSYIIPD 484

Query: 290 KRLSDHCPISIDY 302
              SDH P+ +  
Sbjct: 485 ISASDHSPLGLVL 497


>gi|265767350|ref|ZP_06095016.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263252655|gb|EEZ24167.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 365

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 87/302 (28%), Gaps = 64/302 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++L+S+NI +    +  +               +  Y KN +ADIV +QE        
Sbjct: 99  NSIKLLSYNIMSFGNMKKENGQNP-----------ILNYIKNSNADIVCMQEYAGSETAK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                             N  K+       + +A   K   +  +            R+ 
Sbjct: 148 IHLSNKEIRQALKDYPHHN-IKQVGKTGAGSQLACYSKFPILSAR--------MLDYRSN 198

Query: 142 NRRAVELLVEINGKKIWVLDIHLKS-----------------------FCFLDSLENTYS 178
              ++   ++I    + +++ HL+S                          +  L N  +
Sbjct: 199 YNGSMVYEIKIGKDTVLLINNHLESNKLTREDKVVYEDMLKDPKAGKVKSGVRQLVNKLA 258

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ S QA+ +   I          ++ GDFN       +       +   D    F 
Sbjct: 259 EASAIRSAQARTIAQEIAHSPYPS--VIVCGDFNDSPISYAHR------VISQDMDDAFT 310

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++ +N          +     +D         SDH PI
Sbjct: 311 ESGCGLGISYNQNKFYFRIDNILVSKNL----KASGCTVDNSIKD---------SDHYPI 357

Query: 299 SI 300
             
Sbjct: 358 WC 359


>gi|41410014|ref|NP_962850.1| hypothetical protein MAP3916c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398847|gb|AAS06466.1| XthA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 272

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 73/305 (23%), Gaps = 64/305 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   S    +  +    + D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRSRLPRVLDWLARTEVDVLAMQETKCADG---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       +    +A+  +      +         S       
Sbjct: 41  ------QFPTLPFFELGYEVAHVGFNQWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAA 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    +      + +  +++ +   +      Y             L+D          
Sbjct: 95  AAEARALAATCAGVRIWSLYVPNGRAVGDPHYAYKLD------WLAALRDSAAAWLREDP 148

Query: 204 P--FVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                +AGD+N                           F   +D   + +  P       
Sbjct: 149 AAQIALAGDWNIAPQDDDVWSMEFFAGATHVSEPERRAFNAILDAQFADLVRPFAPGPGV 208

Query: 246 NANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               +        R  + ID+ +      +              D  + +GK  SDH P+
Sbjct: 209 YTYWDYTALRFPKRQGMRIDFILGSPALARR-------VTHAQIDREERKGKGASDHAPV 261

Query: 299 SIDYD 303
            +D  
Sbjct: 262 LVDVS 266


>gi|307596055|ref|YP_003902372.1| exodeoxyribonuclease III Xth [Vulcanisaeta distributa DSM 14429]
 gi|307551256|gb|ADN51321.1| exodeoxyribonuclease III Xth [Vulcanisaeta distributa DSM 14429]
          Length = 246

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 84/297 (28%), Gaps = 69/297 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VSWN+N L              R+      L +     + D+V LQE+ S   V   
Sbjct: 1   MRIVSWNVNGL--------------RSIMRKGSLDRLLSMGNYDVVLLQEIRSSGDVPLT 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +        ++           +    K   +       +   D+  R    
Sbjct: 47  IMGLGYEAYPFPAERKGYA----------GVMTLTKVKPISVIKGLGIKEFDAEGR---- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +V++ +        S        C  + +    L+        S  
Sbjct: 93  -----VITVEFNEFYVVNAYFPRAGDDLSRLGFKISFCGAIEKFLNELR--------SRK 139

Query: 204 PFVIAGDFNRKINY--------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           P ++ GDFN   +                       + I             ++R    +
Sbjct: 140 PVIVCGDFNIARDRLDSSFWDEKHPGLTPEERAWLSQLIKDGFIDAFRELHPNARVFTWR 199

Query: 250 NLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + + +     IDY ++ +     +I+                    SDH P+ I+  
Sbjct: 200 SYKERWRAMRIDYCMVSEELRGKVIKAEVL-----------SDVEGSDHVPVMIEIS 245


>gi|302686738|ref|XP_003033049.1| hypothetical protein SCHCODRAFT_81869 [Schizophyllum commune H4-8]
 gi|300106743|gb|EFI98146.1| hypothetical protein SCHCODRAFT_81869 [Schizophyllum commune H4-8]
          Length = 697

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/349 (11%), Positives = 85/349 (24%), Gaps = 95/349 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           +++++WNIN +        W                    LDADI+  QEM S   N   
Sbjct: 1   MKIMTWNINGIRTIPQYHPWNGLKSHK--------DILDKLDADIICFQEMKSSRQNLPK 52

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHT--------------AIAVRKKNVRVLQQ 126
            V     +  F+S   +   +S                        A A     +     
Sbjct: 53  DVAVPPGYTSFFSFPTKKAGYSGVAIYVKDQYTPFKVEDHLCGLANATASDADRISPALS 112

Query: 127 SYP------LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           SYP      L   +D      +  A    +  +     +++++  +          Y   
Sbjct: 113 SYPMHRFADLDDDEDDPIDFKSLDAEGRTLVADFGLFVLINVYCPNDGSEAQERMKYKMD 172

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR--------------------------- 213
              +      L   +    +     ++ GD N                            
Sbjct: 173 FHRM------LSVRVRGLIDEGREVIVVGDLNAVSDVGDHCEGALTVRKIIDEARKEGQE 226

Query: 214 ---------KINYLGNNDDFWKTIDPNDSLI-------RFPKEKDSRCNANK----NLRN 253
                      + +        ++  +   +          ++    C   K        
Sbjct: 227 VGEKEAEEMFYDTMPARRWLRDSLVEHGGPLVDVCKRFWPERKGMYTCWNTKISARASNY 286

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              ID+ ++       +                    + SDHCP+ +++
Sbjct: 287 GARIDFILVTPYLLPLIKHADIQ-----------PDVKGSDHCPVIVEF 324


>gi|266623165|ref|ZP_06116100.1| exodeoxyribonuclease III [Clostridium hathewayi DSM 13479]
 gi|288865076|gb|EFC97374.1| exodeoxyribonuclease III [Clostridium hathewayi DSM 13479]
          Length = 251

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 73/303 (24%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N L    G                    Y K +DADI  +QE    +      
Sbjct: 3   KLISWNVNGLRACVGKGF---------------LDYFKEVDADIFCIQE-SKLSEGQIEL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
             + +  +++      +          +  A+  K   +       +   D   R     
Sbjct: 47  ELSGYHQYWNYAEKKGY----------SGTAMFTKEEPLSVAYGIGIEEHDHEGR----- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++       +V+  +  +                           ++    E   P
Sbjct: 92  ----VITAEFSDYYVVTCYTPN-------SKDGLARLPYRMVWEDAFLRYLKG-LEEKKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +  GD N                           +  +     +  F      R     
Sbjct: 140 VIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTDLLDAGFIDTFRWFYPDREEIYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + +     L+       +             SDHCP+ +
Sbjct: 200 WWSYRFSARSKNAGWRIDYFCVSEALKDRLVSADIHTEVL-----------GSDHCPVEL 248

Query: 301 DYD 303
             +
Sbjct: 249 VIE 251


>gi|28493711|ref|NP_787872.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist]
 gi|28572897|ref|NP_789677.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27]
 gi|28411030|emb|CAD67415.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27]
 gi|28476753|gb|AAO44841.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist]
          Length = 269

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 84/304 (27%), Gaps = 61/304 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ +WN+N                   +  + +  +    + DI+ LQE+   +    A
Sbjct: 1   MRIATWNVN----------------SIKTRLSQVLHWLTENEIDILALQEIKCRTNAFPA 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +VF ++ +                       AI  + +   +      + G  D  +   
Sbjct: 45  EVFMEHGYFCAAHGL----------GGREGVAIVSKSEPQDITTDVEGIPGYDDRNTGKQ 94

Query: 142 NRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           ++  V+  +       + +  +++ +   + S    Y           +     I     
Sbjct: 95  DKSDVQARIIAATVGGVRLYSVYVPNGRDVHSPHYLYKLD------WLEGFATHIRGVIN 148

Query: 201 SLVPFVIAGDFNRKINYLGNNDD--------FWKTIDPNDSLIRFPKEKDSRCNA----- 247
           +    VIAGDFN  +    +ND         F    +                       
Sbjct: 149 TEPNLVIAGDFNIVLFDSDSNDPRVQTDTDVFRTPHERQAFYNLLDLGLRDLVRPTEPEG 208

Query: 248 NKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           ID+ +        +            D+    GK  SDH P+
Sbjct: 209 FTFWDYRAGRFQKNEGLRIDHILGTDPIANSVRFAKIHHEQRKGDE----GKTPSDHVPV 264

Query: 299 SIDY 302
            I+ 
Sbjct: 265 MIEL 268


>gi|227327919|ref|ZP_03831943.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 381

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 85/275 (30%), Gaps = 27/275 (9%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           ++       +    L+ADI+   E+ + + +     +      ++   +I+         
Sbjct: 111 SSQQRKNTGKVITLLNADILCAVEVENMDVLRDFNSQVLGKKKFNQFVMIDSPN--DPRG 168

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           I  A   R +  ++      +  A   F+   +R  +E+ ++   K+  +  +       
Sbjct: 169 IDVACLTRYRIAQL---RTHIFDAGKQFNPVFSRDCLEVTLDAGLKQ-PIYILCNHFKSQ 224

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228
               E            Q++ + + + Q  +      VI GD N   +    +     ++
Sbjct: 225 SGQTEEERQRGAEKRRDQSERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWQSLAPLFSL 284

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEI------ 278
                +I   + +  R     +   K      +DY  +    ++ ++             
Sbjct: 285 SDLHPVIDPERPEKERYIYYFSGGKKGARLNQLDYIFLSAPLHQAVVAWGIERRGIYNID 344

Query: 279 ----------LYNEDDIKSRGKRLSDHCPISIDYD 303
                     +    ++ S     SDH  + ++ D
Sbjct: 345 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 379


>gi|18147095|dbj|BAB82523.1| deoxyribonuclease I [Gloydius halys]
          Length = 282

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 94/309 (30%), Gaps = 38/309 (12%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++  +LAL    V     +   +R+ ++NI             +      +  + + +  
Sbjct: 1   MKTILLAL--LEVASLLQLTLSLRIGAFNIRAFG---------DKKLSNQTISSFIVRIL 49

Query: 62  KNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                D+  +QE+   +  AV K+     W    +   L++     +++        R+ 
Sbjct: 50  TAY--DLALIQEVRDADLSAVKKLMHLVNWASPNAFSYLVSKPLGHNSHKEQYLFIYRRD 107

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYS 178
            V  ++  Y   G +   +   +R+   +   +   ++  ++ + L +            
Sbjct: 108 RVSPVESYYYKDGCEPCSNTTFSRKPFIVKFAVPQAEVKELVLVPLHA------------ 155

Query: 179 PSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            +      +   L D     K        ++ GDFN    Y+   D     +        
Sbjct: 156 -APEAAVTEIDALYDVYQDVKGRWGATDALLLGDFNAGCKYVRVEDWPSIRLRSIKDFQW 214

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKS--RGKRLS 293
              +       N         D  V +     + ++  +     + +    S      +S
Sbjct: 215 LIPDTADTTVTNTVCAY----DRIVAVGSKLRESILPATAKVDNFQKTLKLSSKDALAVS 270

Query: 294 DHCPISIDY 302
           DH P+ +  
Sbjct: 271 DHFPVEVIL 279


>gi|307108235|gb|EFN56476.1| hypothetical protein CHLNCDRAFT_30910 [Chlorella variabilis]
          Length = 371

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 79/303 (26%), Gaps = 60/303 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++SWN+  L           +  R   +   L   A+   AD++ LQE+     + +   
Sbjct: 101 ILSWNVAGLRALLKKVKEVEAGTRNE-NIPTLVALAEAEQADVLCLQEIK----LQEDHC 155

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                     E          +   ++  A+  +   +           D   R      
Sbjct: 156 VEVLKELNLPEGWHVSWNCSRDKKGYSGTAIVSRQAPLSVSCGIGAEEHDGEGR------ 209

Query: 146 VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              ++       ++++ +  +    L  L           S   + L+           P
Sbjct: 210 ---VITAEFSAFYLVNCYTPNSGEGLKRLGYRVEKWDKDFSAYLKRLEQH--------KP 258

Query: 205 FVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
            V+ GD N     +  +                  F   +     +  F + +     A 
Sbjct: 259 VVVTGDLNVAPAEIDIHSPKTNLKSAGFTPQERASFAANLLGQGFVDCF-RTQYPEAVAY 317

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +D+F++ Q  +  L                      SDHCP+ 
Sbjct: 318 TYWGYRFNARGNNKGWRLDHFLVSQQLHSSLHDC-----------YHLPAIMGSDHCPLG 366

Query: 300 IDY 302
           +  
Sbjct: 367 LVL 369


>gi|300771561|ref|ZP_07081436.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761550|gb|EFK58371.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33861]
          Length = 255

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/298 (9%), Positives = 74/298 (24%), Gaps = 62/298 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L                         + K+ +AD++ LQE+ +   +   
Sbjct: 1   MKIITYNVNGLRAALKKGW---------------LDWLKSTNADVICLQEIKATPDLIPE 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   +                  ++  A+  K      +     G          R
Sbjct: 46  IALLEQLGYEHYWYPAQ-------KKGYSGTAIFTKVSPKRVE----YGCGHELYDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  + +K  V+  +  S    ++ +           Q +  L   I        
Sbjct: 95  I-----IRADFEKFSVMSTYFPSGTTGETRQTFKYQFLDDFQQYSDRLLKDIPNLIVCGD 149

Query: 204 PFVIA---------GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             +            + N         +     I+     +   +  +   +       +
Sbjct: 150 YNICHRAIDIHNPKSNANTSGFLPEEREWMENFINSG--YVDSFRHLNPEPHQYSWWSYR 207

Query: 255 ---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      IDY ++       + +                    SDHCP+ ++  
Sbjct: 208 AGARARNLGWRIDYNMVSAPLASQIEKS-----------YLLNDAVHSDHCPVVVEIS 254


>gi|328782712|ref|XP_623551.2| PREDICTED: recombination repair protein 1 [Apis mellifera]
          Length = 346

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +++ SWN++ +      +                 +Y    DADIV LQE     N + +
Sbjct: 94  LKISSWNVSGIRAVIKKNG---------------IKYIAKEDADIVALQETKCDSNKLPE 138

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               N +  ++   +   +            +A+  K   +  +        D+  R   
Sbjct: 139 EIKLNGYHYYFLESKKSGY----------CGVALFTKEKPIDVKYGLNNSEFDNEGRL-- 186

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +       +++++++ +                +     + L        +  
Sbjct: 187 -------ITAEYLNFYLINVYVPNAGQKLVTLPKRLKWNEIFKTYVRNL--------DEK 231

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +I GD N     +                   D          +  F      + +A
Sbjct: 232 KPVIICGDMNVAHKEIDLRNPKTNIKNAGFTIEERDGMTDFLATGFVDTFRALYPDKTDA 291

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DYF++ +     +      + +Y            SDHCPI
Sbjct: 292 YTFWSYFANARSKNIGWRLDYFLVSERIKDNVCDNVIRDKVY-----------GSDHCPI 340

Query: 299 SIDYD 303
            +  +
Sbjct: 341 VLYIN 345


>gi|295085558|emb|CBK67081.1| Exonuclease III [Bacteroides xylanisolvens XB1A]
          Length = 361

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 88/305 (28%), Gaps = 67/305 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+ + +  E                  +  Y  + +ADI+ LQE  +     
Sbjct: 99  GSIKILSYNVMSFNNLEKKDGKNP-----------VLSYLVDSNADIICLQEYNTATNKK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  ++    F +      H +          +A   K   +           +   +  
Sbjct: 148 YLTEQDIKKAFKAYPYQSVHQQG----KGDVQLACFSKFPILSIHPIEYESNYNGSMKY- 202

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
                  ++ +N   + +++ HL+S          Y                        
Sbjct: 203 -------VLNVNNDTLTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLA 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ + QA  +   I + K      ++ GDFN   +    +    + +D       F 
Sbjct: 256 EASAIRATQADSVAKTIAESKYPTT--IVCGDFNDG-SISYTHRILTQKLDD-----AFT 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  N   +             +    R  + SDH PI
Sbjct: 308 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 354

Query: 299 SIDYD 303
                
Sbjct: 355 WCYIS 359


>gi|227547629|ref|ZP_03977678.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|227211884|gb|EEI79780.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis
           ATCC 55813]
          Length = 286

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 78/311 (25%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81
            + + + N+N +                 +    +  +A     D+  +QE+ +    V 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCMQEVRAPQEDVD 46

Query: 82  KVFPKNTWCIFYSTERLINHS----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +    + +                     + +        ++       +D  
Sbjct: 47  SIFGEFGFEYATAGKIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPSLGEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  I V  +++ +    DS +         L      + +   +
Sbjct: 107 S---GRWIETDVKTPQGYTITVACVYVHAGNTDDSTKMEQK--YRFLDTMLTRMGELRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +D  + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +       +   +  D   +   R 
Sbjct: 222 GDIRGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYELRW 274

Query: 293 SDHCPISIDYD 303
           SDH P++I YD
Sbjct: 275 SDHAPLTITYD 285


>gi|83643258|ref|YP_431693.1| extracellular nuclease [Hahella chejuensis KCTC 2396]
 gi|83631301|gb|ABC27268.1| predicted extracellular nuclease [Hahella chejuensis KCTC 2396]
          Length = 847

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/358 (10%), Positives = 85/358 (23%), Gaps = 68/358 (18%)

Query: 14  VPCTASVAQKVRLVSWNINTLSE---QEGVSLWKNSVKRTTS-------DYTLLRQYAKN 63
                +    + + S+N+        ++  S+  ++  R  +           + +  K 
Sbjct: 438 TATPEAALGNLAVASFNVLNYFNGVKKDDGSIDYSANPRGATTEEEFLLQQARIVKALKT 497

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-------TAIAV 116
           LDAD+V L E+ +                 +      ++   + +           A+  
Sbjct: 498 LDADVVGLMELENDGFGDDSAINTLVTALNNEIGEDAYTYVSTKDGGKPGTDQITVALIY 557

Query: 117 R----KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF----- 167
           R          +    P        +            + +G+   V   H KS      
Sbjct: 558 RAANVTPKGDAIVIDMPEQTLGSETAAMRPSLVQAFTHKASGQSFAVSINHFKSKRSSSA 617

Query: 168 ---CFLDSLENTYSPSCSLLSQQAQWLKDWITQ--------------KKESLVPFVIAGD 210
                   ++        L    A  L + +                      P  +  D
Sbjct: 618 CDNSGPTDIDQMQGNCNPLRVSAAVTLGEALATLGLPERILILGDLNAYSKEDPISVLTD 677

Query: 211 FNRKINYLGNNDDFWKTIDPND--------SLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +N   +           +D                 +  D+   +      +  +D+ + 
Sbjct: 678 YNPATHGYTIKTAANTGMDAGAAVEVSKNYGYALVAETHDAEGFSYTYDGAQGSLDHILA 737

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303
              A + ++      +   E                         R SDH P+ +  +
Sbjct: 738 SSAAMEDIVDLDHWNVNSIEAYALQADGLFKYYKDSTGYFGVGPYRSSDHDPVVVTLN 795


>gi|75674284|ref|YP_316705.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255]
 gi|74419154|gb|ABA03353.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255]
          Length = 295

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 80/306 (26%), Gaps = 64/306 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L +WNIN                       L+ ++ K    D++ LQE          
Sbjct: 27  LTLTTWNIN----------------SVRLRIDLVARFLKAQRPDVLCLQETKCP---DDA 67

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +       RL       +    +  +AV  K        +     +    +  +R
Sbjct: 68  FPLKRFH------RLGYEHIALNGQKGYHGVAVVSKLP------FDASNIRTFCDKIDSR 115

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +L    G    ++  +       D  +   +P  +   Q    +K       ++  
Sbjct: 116 HVSVILGGEAGLAAPLVLHNFYVPAGGDIPDPALNPKFAHKLQFLDEMKGCAPLHPDNGD 175

Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTI--------------DPNDSLIRFPKEKDSRCNA 247
             V+ GD N   +     ++    K +              D  + +             
Sbjct: 176 RHVLVGDLNVAPHENDVWSHKQLLKIVSHTPIECEKLLGVQDRGNWVDIARARIPMSEKV 235

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  + +     +         +         +R SDH P
Sbjct: 236 YTWWSYRAADWVAANRGRRLDHIWVSEALRDGIRD-------FRITRDARGWERPSDHVP 288

Query: 298 ISIDYD 303
           ++   +
Sbjct: 289 VTAVIE 294


>gi|295101467|emb|CBK99012.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii L2-6]
          Length = 250

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 80/303 (26%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                             LDAD+  +QE       A  
Sbjct: 1   MKLISWNVNGLRACLTHDF---------------AASFAALDADVFSVQETKMQPGQADF 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+      YS E              ++  A   K V +   +   +   D   R    
Sbjct: 46  APEGYTEYTYSAE-----------KKGYSGTACWCKTVPLSVTTGIGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + ++++ +  +                         + ++ +  ++  
Sbjct: 91  -----VLTLEYPESYLVNCYTPN-------SQDGLKRLDYRMTWEDAFRAYLLE-LDAKK 137

Query: 204 PFVIAGDFNRKINYLGNNDD----FWKTIDPNDSLIRFPKEKDSRCNA----------NK 249
           P ++ GD N     +   +             +             ++            
Sbjct: 138 PVILCGDLNVAHQEIDIKNAKTNRMSAGFTDQERAKMTELLAVGFTDSFRAIHPDEVKYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++       +        ++            SDHCP+ +
Sbjct: 198 WWSYRFHAREKNAGWRIDYFIVSNRIADKIKAAEIHNEVF-----------GSDHCPVEL 246

Query: 301 DYD 303
           D D
Sbjct: 247 DID 249


>gi|256395196|ref|YP_003116760.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256361422|gb|ACU74919.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 236

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 80/283 (28%), Gaps = 54/283 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + VR++++N+ +L +                D   L +  ++   D+V +QE   +    
Sbjct: 3   ETVRILTYNVRSLRD----------------DRAALARVVRSCAPDVVCVQESPRFFGWQ 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +           S      ++  +        + +   NV V       L  K  +    
Sbjct: 47  RAARTMAASFGLSVVAGGANASGN--------LLLAGPNVEVDAAEVLYLEHKRGYH--- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      + I   +  V   HL               +      QA  +   +    E 
Sbjct: 96  LRGMALAALRIGASRFTVASTHLSM-------------NLEQRVHQAGEVLGHLDGFAER 142

Query: 202 LVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                 V+AGDFN     +       +  D         +   +  N          +D 
Sbjct: 143 NQTTSRVLAGDFNSYPGSVEWGILTERLADAWMVSPMGDEFTSTGPNPY------QRLDA 196

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + ++    +     ++++   D+        SDH P+    
Sbjct: 197 VFVSRDV-DVVRAGVPTDLIAKADEAL-----ASDHRPVLAVL 233


>gi|226529129|ref|NP_001146906.1| LOC100280514 [Zea mays]
 gi|195604980|gb|ACG24320.1| apurinic endonuclease-redox protein [Zea mays]
          Length = 510

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 91/313 (29%), Gaps = 70/313 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +   + ++++SWN+N L        +             ++Q A+  D D++ LQE 
Sbjct: 241 PPLSKDTRALKIMSWNVNGLKALLKSRGF------------SVQQLAQREDFDVLCLQET 288

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +V        + ++           +   ++  A+  +   +  +    +   
Sbjct: 289 KMQEKDIEVIKDTLLDGYTNSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGIPDH 343

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
           D+  R         +V +     ++L  ++ +    L  L    +     L    + L+ 
Sbjct: 344 DTEGR---------VVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKELEK 394

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238
                     P ++ GD N     +  +D                           +   
Sbjct: 395 --------SKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTNEERESFGTNFLSKGFVDTF 446

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +++     A      +           +DYF++ ++  + +            D      
Sbjct: 447 RKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSESIAEKVH-----------DSYILPD 495

Query: 290 KRLSDHCPISIDY 302
              SDH P+ +  
Sbjct: 496 ISASDHSPLGLVL 508


>gi|195604738|gb|ACG24199.1| apurinic endonuclease-redox protein [Zea mays]
          Length = 505

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 91/313 (29%), Gaps = 70/313 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +   + ++++SWN+N L        +             ++Q A+  D D++ LQE 
Sbjct: 236 PPLSKDTRALKIMSWNVNGLKALLKSRGF------------SVQQLAQREDFDVLCLQET 283

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +V        + ++           +   ++  A+  +   +  +    +   
Sbjct: 284 KMQEKDIEVIKDTLLDGYTNSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGIPDH 338

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
           D+  R         +V +     ++L  ++ +    L  L    +     L    + L+ 
Sbjct: 339 DTEGR---------VVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKELEK 389

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238
                     P ++ GD N     +  +D                           +   
Sbjct: 390 --------SKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTNEERESFGTNFLSKGFVDTF 441

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +++     A      +           +DYF++ ++  + +            D      
Sbjct: 442 RKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSESIAEKVH-----------DSYILPD 490

Query: 290 KRLSDHCPISIDY 302
              SDH P+ +  
Sbjct: 491 ISASDHSPLGLVL 503


>gi|89897437|ref|YP_520924.1| hypothetical protein DSY4691 [Desulfitobacterium hafniense Y51]
 gi|219670588|ref|YP_002461023.1| exodeoxyribonuclease III Xth [Desulfitobacterium hafniense DCB-2]
 gi|89336885|dbj|BAE86480.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219540848|gb|ACL22587.1| exodeoxyribonuclease III Xth [Desulfitobacterium hafniense DCB-2]
          Length = 250

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 78/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         + +   ADI  LQE          
Sbjct: 1   MKLISWNVNGLRACLNKGFM---------------DFFQQEQADIFCLQETK-LQEEQIP 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  +++           +    ++  AV  K   +           D   R    
Sbjct: 45  FQLEGYHAYWN----------FAQKKGYSGTAVFAKKEPLSVSYGIGQEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +     +  +      +      + L+           
Sbjct: 91  -----VITLEFDTFYLVTVYTPNSQRDLARLDYRMIWEAEFLGYLKNLEK--------SK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           +  +  N  +  F      +  A 
Sbjct: 138 PVILCGDLNVAHTEIDLKNPKTNRKNAGFTDEERAKFSELLKNGFIDTFRHFNPDKKEAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF + ++    L            D +       SDHCP+ 
Sbjct: 198 TWWSYMFNARANNAGWRIDYFCVSESLKNELK-----------DAMIYDQIMGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEI 249


>gi|320588962|gb|EFX01430.1| endonuclease exonuclease phosphatase family protein [Grosmannia
           clavigera kw1407]
          Length = 314

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 77/302 (25%), Gaps = 26/302 (8%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T + A  +RLV+ N+   + Q  +   +    R     + LR  A   D   + LQE+  
Sbjct: 13  TETSALPLRLVTLNVRY-ATQRPLEGEQPWRVRCPKVCSQLRFVATGQDGAFLCLQEVLH 71

Query: 77  YNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
              +           + W       +    +   S       +   +++        P  
Sbjct: 72  EQMLDIQGQLNDSDDDEWTYIGQGRQDGKTAGEYSPIFYRPRLWSCEQSRMYWLSETPER 131

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                +  A  R     L         V+ +      F          S  L+ + A   
Sbjct: 132 P-SCGWDAALERVVTVGLFRHRATAQPVVVMSTH---FDHLGVRARQESARLILRIAHAW 187

Query: 192 KD----WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                   +       P  + GDFN   +               D     P  +    + 
Sbjct: 188 GRPAGSDSSSFSFLSRPVFLGGDFNSTPDDGAYKTMTAVPGGMVDIAGLVPPSRRYGNDE 247

Query: 248 NKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                          ID+  + +  +      S     +        G  LSDH  +  D
Sbjct: 248 FTYTSFDEPDQTPKRIDFLFVQKPGHIRFPTFSVLANRF------DDGVFLSDHRAVVAD 301

Query: 302 YD 303
            +
Sbjct: 302 IE 303


>gi|189198097|ref|XP_001935386.1| endonuclease/exonuclease/phosphatase family protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187981334|gb|EDU47960.1| endonuclease/exonuclease/phosphatase family protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 607

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 93/335 (27%), Gaps = 67/335 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            ++   + + + ++N+  L+                     + ++ ++   D++F+QE+ 
Sbjct: 290 VSSGGCEGLTVGAYNVENLAPNSTHHAGLAR---------HVVEFMRS--PDVIFVQEVQ 338

Query: 76  SYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             N                      +     +  F       +        +I  A    
Sbjct: 339 DDNGPTNDGVVSANLTLKTLTTAITLAGGPNY-TFTDIAPTDSQDGGQPGGNIRVAYLYN 397

Query: 118 KKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK--- 156
             +VR+                    +  P      + +   +R+ +    E+ GKK   
Sbjct: 398 PNHVRLYKPNPGGALDANEVLAGPALKYNPGRIEPANEAWTASRKPLVAQWEVIGKKQKN 457

Query: 157 ----IWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVPFVIA 208
                + +++H  S     S+     P          +Q++   ++I +   S    + A
Sbjct: 458 KPDVFFTVNVHFGSKGGSSSVHGDARPPVNGGVDDRLEQSRLTANFIKE---STARIITA 514

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GDFN         +  + TI     L                  N   +D+  +  +  K
Sbjct: 515 GDFNEFAFVEPLEE--YATISGLKDLDAVVGIDKVERYTYMFDMNAQQLDHMYVSPSLAK 572

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                         +       ++SDH P     +
Sbjct: 573 KSKAAYEHIH---VNTWPEFAAQVSDHDPSVAKLN 604


>gi|109809705|dbj|BAE96964.1| deoxyribonuclease I splicing isomer 1 [Homo sapiens]
          Length = 282

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 84/283 (29%), Gaps = 30/283 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E               +  + + Q       DI  +QE+   +  AV
Sbjct: 22  SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+          +   +++     ++         R   V  +   Y   G +   +  
Sbjct: 71  GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            NR    +       ++    I        D++    +     L  Q +W          
Sbjct: 131 FNREPAIVRFFSQFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW---------- 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            L   ++ GDFN   +Y+  +      +  + +      +         +       D  
Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAY----DRI 236

Query: 261 VMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300
           V+        ++ +S     +      S    + +SDH P+ +
Sbjct: 237 VVAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 279


>gi|134099932|ref|YP_001105593.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338]
 gi|291008673|ref|ZP_06566646.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338]
 gi|133912555|emb|CAM02668.1| AP endonuclease, family 1:exodeoxyribonuclease III xth
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 265

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 82/304 (26%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                  T+    L ++      D++ +QE+   +     
Sbjct: 1   MRIATWNLN----------------SVTARLPRLLEWLSAASPDVLCVQELKCSS----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + + +   +      +   +       +  R     V +      G     +     
Sbjct: 40  ---DMFPVAEVSALGYEVAAYGTGRWNGVGVLSRVGLDEVRRGLPGEPGYLPEGAMFEVN 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + V   G  + +  +++ +  ++      Y        +  + L+D +  +++   
Sbjct: 97  EPRAIGVSCAG--VRLWSVYVPNGRYVGHPHYDYK------LRFLEALRDTVAAERDHGR 148

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            F + GDFN                              +        +P+         
Sbjct: 149 AFAVLGDFNIAPADDDVWDISAFAESTHVTEPERSALADLRAAGLADVYPRALKYDV-PF 207

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID    D      +            D    +GK  SDH P+ 
Sbjct: 208 TYWDYRAGAFPKNMGMRIDLAYGDPRFTGAVSDSYV-------DREARKGKGASDHAPLV 260

Query: 300 IDYD 303
           ID D
Sbjct: 261 IDLD 264


>gi|323138553|ref|ZP_08073621.1| Endonuclease/exonuclease/phosphatase [Methylocystis sp. ATCC 49242]
 gi|322396187|gb|EFX98720.1| Endonuclease/exonuclease/phosphatase [Methylocystis sp. ATCC 49242]
          Length = 319

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 90/325 (27%), Gaps = 53/325 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78
            ++RL ++N+  L             +        L     ++DADI+ LQE+ +     
Sbjct: 2   NEMRLATFNLENL------DWAPGRPEAFARRRAALLPLLDDIDADILCLQEIDAQKTSK 55

Query: 79  -------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL- 130
                  A+ ++F    +  F+   R  +             +A+  +    +++     
Sbjct: 56  HGPRAYLALDRLFDGTRYAGFH---RFTSLRPGADTPADVHNLAILSRWPIRIRRQIHHE 112

Query: 131 -------------LGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENT 176
                               +   +R  +   VE  +G+ + V+++HL++   +      
Sbjct: 113 IVPPWPWPPPRDGDVTPPPIAIGWDRPMLYAAVELPDGRLLHVVNLHLRAPRPVPVPTAR 172

Query: 177 YSPSCSL-----------LSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDD 223
              S                 QA   + +       E      I GDFN   +       
Sbjct: 173 GEGSSRALIEGQFVAALKREGQALEARLFAETIFDAEPDALLAICGDFNADEHDAPT-RL 231

Query: 224 FWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                D  +   R       +   +      +      ID+ +            +    
Sbjct: 232 LRGGRDEGEDAPRALLALEERVAPASRYTVIHAGRPTLIDHILASHALAAMWRSTAILNA 291

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
              ++         S H P+   ++
Sbjct: 292 GLQDEFYAKDPIDGSLHAPVMAMFE 316


>gi|209525496|ref|ZP_03274035.1| Endonuclease/exonuclease/phosphatase [Arthrospira maxima CS-328]
 gi|209493995|gb|EDZ94311.1| Endonuclease/exonuclease/phosphatase [Arthrospira maxima CS-328]
          Length = 501

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 91/322 (28%), Gaps = 40/322 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           ++ +++ ++N+  L             + +      T +      + ADI+  QE+    
Sbjct: 174 SKTLKIGTFNLYNLVLPNRTYYETRQYTPELYHQKKTWISHQLATMQADIIGFQEIFDPE 233

Query: 79  AVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           A+ ++     ++   +         K          I   +   +   +S   +      
Sbjct: 234 ALQEILAATESYHNAHLITTNPTRDKPVVGLCSKLPIISWQIYDKFPPESQIDIEGTMIP 293

Query: 138 SRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS----------PSCSLLSQ 186
               +R  + + +++    +  V  +HLKS                       S    S 
Sbjct: 294 INHFSRPVLAVNIQLQDSLQCTVFVVHLKSQRPQIPEGVDSQDPVEKAKGKVRSLLRRSA 353

Query: 187 QAQWLKD-WITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPNDSLIR 236
           +A  L+   +     S  P +I GDFN              +      +K    +D L  
Sbjct: 354 EATALRCIMLKTWSHSQNPIIILGDFNDSDLAITTKIMAGDISWKKTRFKPNHNHDELQL 413

Query: 237 FPKEKDSRCNANKNL-------RNKIPIDYFVMDQNA---------YKFLIQESFSEILY 280
           +  +      + ++             +D+ ++ Q               +      ++ 
Sbjct: 414 YSVKDIQARQSYRDCYYTYMYNGYYETLDHILVSQELVLENSRQVGKVSYVALFNDHLVD 473

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                +S     SDH  +    
Sbjct: 474 QSLSDESIEPWKSDHGQVVATI 495


>gi|297172065|gb|ADI23048.1| metal-dependent hydrolase [uncultured Planctomycetales bacterium
           HF0770_03I01]
          Length = 278

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 89/305 (29%), Gaps = 57/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+NI                ++   +   + +  K    D+  LQE+  +   +  
Sbjct: 1   MKFLSYNIQY-----------GKGQKGKHNLYRVAETIKET--DVACLQELEKFWQRSGF 47

Query: 84  FPKNTWCIFYSTERLINHS-------------KRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
             +      +  +    +               + SN        +  +   +  +++PL
Sbjct: 48  VDQAQILSEFLPKFYSVYGPALDMDASLKNQYGQISNQRRQFGNMILSRYPIISTRNFPL 107

Query: 131 L--GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
              G       +  R  +E ++ I G     +     S    +S           ++Q  
Sbjct: 108 PKQGTGPDPEHSIQRALLETVINIPGLGYTRVYSTHLSHRNPESRFPQIQLMMRRINQAP 167

Query: 189 QWLKDWITQKKESL----------VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                W  +  ++             F++ GD N K++     +         +      
Sbjct: 168 HEQGAWSGEHTDAGWTEGEKPPMPQQFILMGDMNFKLDSKEYKEMV-----DTEDFYDAW 222

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           K  D     N +  +   ID+  + +N    + +               R    SDH P+
Sbjct: 223 KSNDKDRGTNVDGDS---IDHCFVSKNLLPKIKR-----------TYIDRNITASDHWPL 268

Query: 299 SIDYD 303
            ++ D
Sbjct: 269 WMEMD 273


>gi|304395763|ref|ZP_07377646.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB]
 gi|304357057|gb|EFM21421.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB]
          Length = 253

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 79/286 (27%), Gaps = 49/286 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++++ N +                        LR   +  +AD+VFLQE+   +A+  
Sbjct: 9   SIKVLTINTHKGFAPFNRRF----------ILPELRDAVRATEADVVFLQEVMGTHAIHA 58

Query: 83  VFPK-----NTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +  +       +     T      + +     + H   AV  +      ++  +  A   
Sbjct: 59  LNHEAWPDSPHYEFLADTIWNDFAYGRNAVYPEGHHGNAVLSRFPITEYENRDISVAG-- 116

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              + NR  +   + +      +  I +                 +    Q + + + + 
Sbjct: 117 ---SENRGMLHCQIALPEPHGTLHVICVHLGL-----------KEAHRHAQMKKICEMVN 162

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P V+AGDFN                        F  +              + 
Sbjct: 163 S-LPPDAPVVVAGDFND-----WQRRANSILKQGAGLKEVFSMKTGRPARTFPARFPILR 216

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D   +               + +     +     LSDH P++++ 
Sbjct: 217 LDRIYVRNA-----------TVSHPWALPRKPWSHLSDHAPLAVEI 251


>gi|58336406|ref|YP_192991.1| exodeoxyribonuclease A [Lactobacillus acidophilus NCFM]
 gi|227902538|ref|ZP_04020343.1| exodeoxyribonuclease A [Lactobacillus acidophilus ATCC 4796]
 gi|58253723|gb|AAV41960.1| exodeoxyribonuclease A [Lactobacillus acidophilus NCFM]
 gi|227869627|gb|EEJ77048.1| exodeoxyribonuclease A [Lactobacillus acidophilus ATCC 4796]
          Length = 275

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++L+     +  +    R       + +     + DI+ +QE            
Sbjct: 3   LISWNIDSLNAALTGTSARAEETR------QVLEKIHAKNPDIIAIQETKLKATGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +      +     +  S  +     +       K       SYP++GA +     G    
Sbjct: 57  QEILAEKFPEYNYVWRSSEEPARKGYAGTMYLYKKDLTPIVSYPVIGAPEPMDCEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +     +V  ++  +        +         ++  Q L        +   P 
Sbjct: 114 ---IITLEFNDFYVTQVYTPNSGSGLKRLSDRQVWDQKYTKYLQEL--------DKHKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +        F K   +  +    
Sbjct: 163 LASGDYNCAHTEIDLKHPNNNHHSAGFTDEERSGFTNLLNAGFTDTFRKVHGNITDVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++       +++    +                DHCPI +
Sbjct: 223 WAQRVKTAKINNSGWRIDYWLVSNRIANKVVRSEMIDTEKRA-----------DHCPILL 271

Query: 301 DYD 303
           + +
Sbjct: 272 EIN 274


>gi|227878040|ref|ZP_03996030.1| exodeoxyribonuclease III [Lactobacillus crispatus JV-V01]
 gi|256843761|ref|ZP_05549248.1| exodeoxyribonuclease III [Lactobacillus crispatus 125-2-CHN]
 gi|256849680|ref|ZP_05555112.1| exodeoxyribonuclease A [Lactobacillus crispatus MV-1A-US]
 gi|262047734|ref|ZP_06020686.1| exodeoxyribonuclease III [Lactobacillus crispatus MV-3A-US]
 gi|293381982|ref|ZP_06627943.1| exodeoxyribonuclease III [Lactobacillus crispatus 214-1]
 gi|312977037|ref|ZP_07788786.1| exodeoxyribonuclease III [Lactobacillus crispatus CTV-05]
 gi|227862358|gb|EEJ69887.1| exodeoxyribonuclease III [Lactobacillus crispatus JV-V01]
 gi|256613666|gb|EEU18868.1| exodeoxyribonuclease III [Lactobacillus crispatus 125-2-CHN]
 gi|256713796|gb|EEU28785.1| exodeoxyribonuclease A [Lactobacillus crispatus MV-1A-US]
 gi|260571939|gb|EEX28507.1| exodeoxyribonuclease III [Lactobacillus crispatus MV-3A-US]
 gi|290921438|gb|EFD98479.1| exodeoxyribonuclease III [Lactobacillus crispatus 214-1]
 gi|310896365|gb|EFQ45430.1| exodeoxyribonuclease III [Lactobacillus crispatus CTV-05]
          Length = 275

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 81/303 (26%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++L+          +  R      +L +   + + DI+ +QE            
Sbjct: 3   LISWNIDSLNA-----ALTGTSARAEETRQVLTK-IHDANPDIIAIQETKLRATGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           K      +     +  S  +     +       K       S P++GA +     G    
Sbjct: 57  KEVLAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKGLTPAVSEPIIGAPEPMDHEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +   K +V  ++  +                   +  Q L        +   P 
Sbjct: 114 ---IITLEFDKCFVTQVYTPNSGSGLKRLAERQVWDQKYIEYLQKL--------DEKKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +        F K           
Sbjct: 163 LASGDYNCAHTEIDLKHPENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGEITGVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++       +++    +                DHCPI +
Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHCPILL 271

Query: 301 DYD 303
           + +
Sbjct: 272 EIN 274


>gi|187918395|ref|YP_001883958.1| exodeoxyribonuclease III [Borrelia hermsii DAH]
 gi|119861243|gb|AAX17038.1| exodeoxyribonuclease III [Borrelia hermsii DAH]
          Length = 253

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 84/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + L+SWN+N +    G   +               ++ +  + DI+ LQE  +       
Sbjct: 1   MNLISWNVNGIRAVFGKGFF---------------EFIEKYNPDILCLQETKACKEQLPK 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  ++S           S    ++ +A+  K   +      L   +       
Sbjct: 46  ELISIEGYYSYFSK----------SIIKGYSGVALYSKIEPI-----KLENMRMEIFDRE 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +      + +   +++ +  +               +   +    L+        +
Sbjct: 91  GRCLIA-----HYRDFILINAYFPN-------SQALRKRLNYKLEFLMSLESIANSFVTA 138

Query: 202 LVPFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
               VI GDFN     +                 +  W     N   +   +  +     
Sbjct: 139 GKNVVICGDFNIAHTEIDLSNPKSSRESAGFYIEETTWMDNFLNGGYVDTFRMFNGEPGN 198

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYF++++     +        +             SDHCP+
Sbjct: 199 YTWWDYRTRARERNIGWRIDYFLVNKVFKSEVRDALILNEV-----------MGSDHCPV 247

Query: 299 SIDY 302
            ++ 
Sbjct: 248 FLEL 251


>gi|255523264|ref|ZP_05390235.1| exodeoxyribonuclease III Xth [Clostridium carboxidivorans P7]
 gi|296186225|ref|ZP_06854630.1| exodeoxyribonuclease III [Clostridium carboxidivorans P7]
 gi|255513132|gb|EET89401.1| exodeoxyribonuclease III Xth [Clostridium carboxidivorans P7]
 gi|296049493|gb|EFG88922.1| exodeoxyribonuclease III [Clostridium carboxidivorans P7]
          Length = 252

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 81/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        ++ K ++ADI  +QE          
Sbjct: 1   MKLISWNVNGLRACVTKGF---------------LEFFKEVNADIFCIQESKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D   R    
Sbjct: 45  LELEGYHQYWN----------YAERKGYSGTAIFTKKKPLSFTYGIGIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                   +     +D++   +++  
Sbjct: 91  -----VITLEFDDFYMVTVYTPN-------SKDQLARLEYRMKWENDFRDYLKSLEKNK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         + +        +  +      +  A 
Sbjct: 138 PVIMCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKFTEFLSAGFIDTYRYFNPDKEGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +     + L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFCVSDCLKERLVSADIHTEV-----------MGSDHCPVE 246

Query: 300 IDYD 303
           +   
Sbjct: 247 LVIS 250


>gi|167759302|ref|ZP_02431429.1| hypothetical protein CLOSCI_01649 [Clostridium scindens ATCC 35704]
 gi|167663176|gb|EDS07306.1| hypothetical protein CLOSCI_01649 [Clostridium scindens ATCC 35704]
          Length = 250

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 76/302 (25%), Gaps = 78/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N +                        ++ +  DADI  +QE          
Sbjct: 1   MKFVSWNVNGIRACVQKGFM---------------EFFQEADADIFCIQESKMQEG-QLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D   R    
Sbjct: 45  LETPGYHQYWN----------YAKKKGYSGTAIFTKQEPISVSYGIGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  + + ++  +     +                + L++          
Sbjct: 91  -----VITLEFEDYYFITVYTPNSQNELARLPYRMQWEDDFLAYLKKLEE--------AK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           + ++     +  F           
Sbjct: 138 PVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKFTSLVDAGFIDTFRYFYPDAQGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + ++  + L+                     SDHCPI 
Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSESLEERLVDAKILT-----------DVMGSDHCPIV 246

Query: 300 ID 301
           ++
Sbjct: 247 LE 248


>gi|294674336|ref|YP_003574952.1| exodeoxyribonuclease III [Prevotella ruminicola 23]
 gi|294473057|gb|ADE82446.1| exodeoxyribonuclease III [Prevotella ruminicola 23]
          Length = 249

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 77/302 (25%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L   EG                      + LDAD   LQE     A    
Sbjct: 1   MKLISWNVNGLRACEGKGF---------------SDTFRELDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K+  +       +   D   R    
Sbjct: 45  LAFEGYESYWNYAEKKGY----------SGTAIFTKHHPLSVTYGIGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++  +  +        +      +      + L        ++  
Sbjct: 91  -----VITLEMEDFYLVTCYTPNSQDGLKRLDYRMTWENDFRAYLKGL--------DAKK 137

Query: 204 PFVIAGDFNRKINYLGNNDD----FWKTIDPNDSLIRFPKEKDSRCN----------ANK 249
           P ++ GD N     +   +             +             +             
Sbjct: 138 PVILCGDLNVAHQEIDLKNPKTNRMNAGFTDQEREQFSTLLASGFTDSFRYKYPEQVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYFV+     + +        +             SDHCP+ +
Sbjct: 198 WWSYRFQARQKNAGWRIDYFVISDRLRERMDDARIHTQIL-----------GSDHCPVEL 246

Query: 301 DY 302
             
Sbjct: 247 TL 248


>gi|254479049|ref|ZP_05092404.1| exodeoxyribonuclease III [Carboxydibrachium pacificum DSM 12653]
 gi|214035005|gb|EEB75724.1| exodeoxyribonuclease III [Carboxydibrachium pacificum DSM 12653]
          Length = 258

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 78/301 (25%), Gaps = 75/301 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L                         Y K +DADI  +QE         +
Sbjct: 1   MKLVSWNVNGLRACLQKGFM---------------DYFKAIDADIFCIQETKLQENQKDI 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    +             +    ++  AV  K   +           D   R    
Sbjct: 46  EGLDLNGYYAFWN--------FAEKKGYSGTAVFTKYKPLSVSYGIGTPHHDKEGR---- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K ++++ +  +     +  +               L            
Sbjct: 94  -----VITLEYEKFFLVNTYTPNSQRGLTRLDYRMQWEEDFRSYLLKLDSL--------K 140

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +  +  +  F      + +A 
Sbjct: 141 PVILCGDLNVAHQEIDIKNPAANRRNAGFTDEEREKMTILLNSGFIDTFRYFYPDKKDAY 200

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            +DYF++ +    +LI       +             SDHCP+ 
Sbjct: 201 TWWSYMHNAREKNIGWRVDYFIVSERLKDYLIDSQIHSEV-----------MGSDHCPVV 249

Query: 300 I 300
           +
Sbjct: 250 L 250


>gi|161506683|ref|YP_001576633.1| exodeoxyribonuclease A [Lactobacillus helveticus DPC 4571]
 gi|260101796|ref|ZP_05752033.1| exodeoxyribonuclease [Lactobacillus helveticus DSM 20075]
 gi|160347672|gb|ABX26346.1| Exodeoxyribonuclease A [Lactobacillus helveticus DPC 4571]
 gi|260084387|gb|EEW68507.1| exodeoxyribonuclease [Lactobacillus helveticus DSM 20075]
          Length = 275

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 80/303 (26%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++L+     +  +    R       +      L+ DI+ +QE            
Sbjct: 3   LISWNIDSLNAALTGTSARAEETRG------VLDKIHALNPDIIAIQETKLRATGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +      +     +  S  +     +       K       S P +GA +     G    
Sbjct: 57  QTILAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPAVSKPAIGAPEPMDEEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +   K +V  ++  +                   +  + L +          P 
Sbjct: 114 ---IITLEFDKYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNE--------KKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +        F K   +       
Sbjct: 163 LASGDYNCAHTEIDLKHPENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++       +++    +                DHCPI +
Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHCPILL 271

Query: 301 DYD 303
           + +
Sbjct: 272 EIN 274


>gi|118138505|pdb|2ISI|A Chain A, Crystal Structure Of Ape1 From Homo Sapiens In A New
           Crystal Form Complexed With A Ligand
 gi|118138506|pdb|2ISI|B Chain B, Crystal Structure Of Ape1 From Homo Sapiens In A New
           Crystal Form Complexed With A Ligand
 gi|118138507|pdb|2ISI|C Chain C, Crystal Structure Of Ape1 From Homo Sapiens In A New
           Crystal Form Complexed With A Ligand
          Length = 317

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 52  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 96

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 97  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 146

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 147 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 199

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 200 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 253

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 254 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 304

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 305 --GSDHCPITL 313


>gi|60652565|gb|AAX28977.1| APEX nuclease 1 [synthetic construct]
          Length = 319

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|299037|gb|AAB26054.1| APEX nuclease=major apurinic/apyrimidinic endonuclease [human,
           Peptide, 317 aa]
          Length = 317

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 52  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 96

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 97  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 146

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 147 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 199

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 200 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 253

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 254 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 304

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 305 --GSDHCPITL 313


>gi|157830335|pdb|1BIX|A Chain A, The Crystal Structure Of The Human Dna Repair Endonuclease
           Hap1 Suggests The Recognition Of Extra-Helical
           Deoxyribose At Dna Abasic Sites
          Length = 287

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 22  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 66

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 67  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 116

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 117 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 169

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 170 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 223

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 224 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 274

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 275 --GSDHCPITL 283


>gi|32024|emb|CAA42437.1| HAP1 [Homo sapiens]
          Length = 318

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQEAQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|219478|dbj|BAA14381.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
          Length = 318

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|18375501|ref|NP_001632.2| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens]
 gi|18375503|ref|NP_542379.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens]
 gi|18375505|ref|NP_542380.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens]
 gi|113984|sp|P27695|APEX1_HUMAN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; Short=APE-1; AltName: Full=REF-1;
           AltName: Full=Redox factor-1; Contains: RecName:
           Full=DNA-(apurinic or apyrimidinic site) lyase,
           mitochondrial
 gi|13399540|pdb|1E9N|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New
           Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE,
           Ape1, And Its Implications For The Catalytic Mechanism
 gi|13399541|pdb|1E9N|B Chain B, A Second Divalent Metal Ion In The Active Site Of A New
           Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE,
           Ape1, And Its Implications For The Catalytic Mechanism
 gi|13399606|pdb|1HD7|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New
           Crystal Form Of Human ApurinicAPYRIDINIMIC ENDONUCLEASE,
           Ape1, And Its Implications For The Catalytic Mechanism
 gi|19339022|gb|AAL86909.1|AF488551_1 APEX nuclease (multifunctional DNA repair enzyme) [Homo sapiens]
 gi|32022|emb|CAA46925.1| AP endonuclease 1 [Homo sapiens]
 gi|178747|gb|AAA58372.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
 gi|183780|gb|AAA58629.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
 gi|254069|gb|AAB22977.1| Ref-1 [Homo sapiens]
 gi|13436404|gb|AAH04979.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|28071072|emb|CAD61917.1| unnamed protein product [Homo sapiens]
 gi|54697126|gb|AAV38935.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|60655677|gb|AAX32402.1| APEX nuclease 1 [synthetic construct]
 gi|61358645|gb|AAX41600.1| APEX nuclease 1 [synthetic construct]
 gi|63100763|gb|AAH95428.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|119586867|gb|EAW66463.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|119586868|gb|EAW66464.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|119586869|gb|EAW66465.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|119586870|gb|EAW66466.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|119586871|gb|EAW66467.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|119586872|gb|EAW66468.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|158255636|dbj|BAF83789.1| unnamed protein product [Homo sapiens]
          Length = 318

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|86147336|ref|ZP_01065650.1| extracellular nuclease-related protein [Vibrio sp. MED222]
 gi|85834901|gb|EAQ53045.1| extracellular nuclease-related protein [Vibrio sp. MED222]
          Length = 864

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/372 (12%), Positives = 102/372 (27%), Gaps = 91/372 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  +           +      LDADI+ L E
Sbjct: 469 GDLRIATFNVLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLME 528

Query: 74  MGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116
           + +      +A+ ++  +         + +            +    +     I T +  
Sbjct: 529 IENNGFGEGSAIQQLVNQLNDRIERKKDRYTFVAVDSNEDGVTDEMDSIGTDVITTGVIY 588

Query: 117 RKKNVRVLQQSY------------PLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162
           RKK V++                    G      +   R ++    ++ G  +K+ V   
Sbjct: 589 RKKVVKLKNSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVKGTKEKLTVAIN 648

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202
           H KS                      +      +     A  L + +   K         
Sbjct: 649 HFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDM 708

Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  P ++  D+             N  I+ +    D    I  N   I    +K  
Sbjct: 709 NSYGMEDPMLVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHP 768

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290
              +         +D+ ++  +    ++  +   I   E  +    +             
Sbjct: 769 DSWSYSYNDEVGALDHLLISDSLKDMVVDATDWHINGGESKLLDYNEEFKGDLPKYQDHF 828

Query: 291 RLSDHCPISIDY 302
           R SDH P  ++ 
Sbjct: 829 RSSDHDPAVLEL 840


>gi|317504627|ref|ZP_07962594.1| AP endonuclease domain protein [Prevotella salivae DSM 15606]
 gi|315664248|gb|EFV03948.1| AP endonuclease domain protein [Prevotella salivae DSM 15606]
          Length = 363

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 87/303 (28%), Gaps = 70/303 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++++S+N+ + +  +  +  K            + +Y K    DI+ +QE  +     
Sbjct: 99  KAIKVMSYNVWSFAGWKRYADGKFP----------ILEYIKVQHPDILCMQEAMTNEIGQ 148

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                    ++        +      +     IA+  +   V  +        +      
Sbjct: 149 HRVDAVLDKLYA-------YKDTLRYSQTSDCIALYSRYPIVSHERISYPSKGNLSG--- 198

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
                   V+I    + +++ HL++    +  +  +                        
Sbjct: 199 -----AFEVKIGNDTVIIVNNHLETTGLSNEDKREFKSLVKGDLKVTAAKQTSYRLVDKL 253

Query: 179 -PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             + +  + QA  +  +I+   +     ++ GDFN        +      ID       +
Sbjct: 254 GDASAKRAVQADAVARYISNHLDKS--MIVCGDFNDTPISYARHTIAKNLID------CY 305

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +    +       + ID+ +  ++   +  +   S                SDH P
Sbjct: 306 VSTGNGPGVSYHAGGMYVRIDHIMCTKDWQPYACKVDHSIGE-------------SDHYP 352

Query: 298 ISI 300
           I  
Sbjct: 353 IVC 355


>gi|319901536|ref|YP_004161264.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319416567|gb|ADV43678.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 336

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/342 (11%), Positives = 82/342 (23%), Gaps = 58/342 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSE-------QEGVSLWKNSVKR 49
           M +  +L   +F      +          +  +N+  L +        +   L   S K 
Sbjct: 1   MKKLLILFSFWFCAITLGAQNNSKRELYSVAFYNLENLFDTIHDTGKNDYEFLPDGSYKW 60

Query: 50  TTSDYTL-----------LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           T   Y             L +         + + E+ + N +  +  +     +      
Sbjct: 61  TAKKYQSKLRNMSKVLGSLSKELVPEGPAFIGVAEVENRNVLVDLVKQPAISNYEFIHYE 120

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
               +      I  A+    K   V              +    R  + +  ++ G+++ 
Sbjct: 121 GPDKR-----GIDCALLYDPKQFSVTGSKLVPSVPFKGDTVHLTRGFLIVDGQLAGERVC 175

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           V+  H  S           +      ++Q + LKD     K+  +  ++ GD N      
Sbjct: 176 VIVNHWPSR-------GAKAEVRIHAARQVEALKDS-LLHKDKKLKLIVMGDMNDDPMDE 227

Query: 219 GN-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                       K          +   +D               D  V+ +   K     
Sbjct: 228 SMQALGARKYAKKVRKGEFYNPWWETLEDKGVGTLLYQGKWNLFDQIVVSKPLLKSRKGL 287

Query: 274 SFSEI------------------LYNEDDIKSRGKRLSDHCP 297
            +                            +      SDH P
Sbjct: 288 RYDHNEVFIRDYLIQQDGKYKGAPLRTHGGRIWLNGYSDHLP 329


>gi|294506961|ref|YP_003571019.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8]
 gi|294343289|emb|CBH24067.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8]
          Length = 361

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 80/302 (26%), Gaps = 25/302 (8%)

Query: 19  SVAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNL----DADIVFLQE 73
             A  VR+ +WN+       +   +   +      D    ++         DAD++ LQE
Sbjct: 62  PDADTVRVATWNLEHFVDGHDNPYIDAGTENTPAPDLKNRKRRVARALRRLDADLLVLQE 121

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             S   +              T      S       ++  +  R     V   +  +   
Sbjct: 122 AESEAFLQSFVE----DRLGDTGYRFATSVESPTWYMNVVLLSRYPLGVVRNYADVVTPI 177

Query: 134 KDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
               +  G   A  L    +    + V    + +           +        Q ++L 
Sbjct: 178 VGQEADNGEPAAQSLTNHRLWTADVRVAPNRVWTLIGAHLKAGRSAADRGWRIGQIRFLH 237

Query: 193 DWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPN----------DSLIRFPKE 240
             +++ ++       ++AGD N   +             P             +      
Sbjct: 238 AELSRLRDDRPAAKMLVAGDLNSLPDSPELRLLLNNPDRPAPDSVQPGRVPGDIRFTDPL 297

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            D     +        +DY + +      L+  S         D  +     SDH P++ 
Sbjct: 298 SDRPTPTHPADNPVRQLDYLLPNPALSDRLVDGSVRVARPLPADSMAAT---SDHLPVAA 354

Query: 301 DY 302
            +
Sbjct: 355 SF 356


>gi|15888787|ref|NP_354468.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58]
 gi|15156541|gb|AAK87253.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58]
          Length = 269

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 81/276 (29%), Gaps = 50/276 (18%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNA------------------------VAKVFPKNTWC 90
             L  Y  + D DI+ LQE+    A                        VA+  P +   
Sbjct: 17  DKLVPYIASSDPDILCLQEVVHTPAATQDWLSYRDHGVELPQRANFFRDVAEALPDHVAI 76

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRAGNRRAVE 147
              + +  +   +    +    A  VRK    + Q     + +  A    +   +R A  
Sbjct: 77  FCPAAQGDLWQGETRYPSQFGLATFVRKSIAIIAQAQGFVHGVFSADGYGNHPRSRTAHA 136

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           + V        V+  H+         +            QA+ L  ++    E     ++
Sbjct: 137 IRVFDFTTGQPVVIAHMH-----GLRDLEGKHDIPARLHQAKRLVQFVKNIAEDGDRVIV 191

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
            GDFN   +        +  ++  D +        +    +   +     DY +++    
Sbjct: 192 CGDFNVLPDSR-----TFAVLNELDLVELVTTRGFTDTRTSHYAKPNRYADYLLVNPA-- 244

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       ++          +SDHCP+ +++ 
Sbjct: 245 -------VKVSQFDVVRQPE----VSDHCPLLLEFS 269


>gi|310779700|ref|YP_003968032.1| exodeoxyribonuclease III Xth [Ilyobacter polytropus DSM 2926]
 gi|309749023|gb|ADO83684.1| exodeoxyribonuclease III Xth [Ilyobacter polytropus DSM 2926]
          Length = 253

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 82/306 (26%), Gaps = 81/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++SWN+N                R        +   + LD DI+ LQE          
Sbjct: 1   MKILSWNVNG--------------IRAVEKKGAFQDVFEKLDPDILCLQETKASEEQLTD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +  F+            +    ++ +A+  K   +  ++  +    D      
Sbjct: 47  NIKKIPGYYSFF----------ESAVKKGYSGVALYSKTKPLSIKNMGIDIFDDEGRY-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +E   +   +++ +  +              CS        L D+     E+
Sbjct: 95  --------IEAKFENFTLINCYFPNSQEKGKRLEYKLNFCS-------DLLDYCNSLVEN 139

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               V+ GD+N                         +   K ++     I   +      
Sbjct: 140 GENIVLCGDYNIAHQEIDLKNPKSNTKNPGFLPEEREWMSKFLNSG--YIDIFRYLYPNE 197

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY  ++++    + +    +               SDHC
Sbjct: 198 IKYTWWSYRFKAREKNIGWRIDYHCVNKDFISTIKKVEILD-----------NITGSDHC 246

Query: 297 PISIDY 302
           P+ I+ 
Sbjct: 247 PVLIEL 252


>gi|257870600|ref|ZP_05650253.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2]
 gi|257804764|gb|EEV33586.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2]
          Length = 255

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 84/285 (29%), Gaps = 37/285 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+        V    +   + +     +       D DI+ +QE+     VA +
Sbjct: 1   MKVATYNLR-------VDTDYDKEWQWSYRADKVLALIDYHDWDILCVQEVR-PTQVADL 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    + ER  + +           +  +  +        P + +    +    R
Sbjct: 53  ARLTDYESV-TAERDGDGTGEGIGIYYKKTMFSKVDSGSFWLSLTPDVPSIHPEAEY-LR 110

Query: 144 RAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +  ++    G    V+D HL +         +       +    + L D I       
Sbjct: 111 LCLWTVLRDRKGHDFLVIDTHLDN--------ISEIARFEGMKVILERLADKIAA----- 157

Query: 203 VPFVIAGDFNRKINYLGNNDD---FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +P ++ GD N +     +      F    + N+     P+      +          IDY
Sbjct: 158 LPVLLMGDLNAEAVERVHESLQTIFVNAKEQNEKGHYGPRGSYQNFDYQLPWNQLEEIDY 217

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                        + F  I          G+  SDH P+  D  F
Sbjct: 218 IY----------TKGFRIIKTGCLTDSCDGRFPSDHFPLEADLRF 252


>gi|241759074|ref|ZP_04757185.1| exodeoxyribonuclease III [Neisseria flavescens SK114]
 gi|319639647|ref|ZP_07994394.1| exodeoxyribonuclease [Neisseria mucosa C102]
 gi|241320676|gb|EER56929.1| exodeoxyribonuclease III [Neisseria flavescens SK114]
 gi|317399218|gb|EFV79892.1| exodeoxyribonuclease [Neisseria mucosa C102]
          Length = 259

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +    ++       +S     +                      +G         
Sbjct: 47  DMKNPHGMHGYWHCAEKRGYSGVAVYSKRKPDNV--------------QIGMGIEEFDRE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V  +  K+ V+ ++L S    +  +        +  +        +   K  
Sbjct: 93  GRF-----VRCDFGKLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246
               V+ GD+N     +   +      +                        +       
Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVP 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++        +                + ++ SDH P
Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           + ++YD+
Sbjct: 250 LVVEYDY 256


>gi|330812030|ref|YP_004356492.1| endonuclease [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380138|gb|AEA71488.1| putative endonuclease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 269

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 82/286 (28%), Gaps = 50/286 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79
             +++ N +                        LR+  +++ AD+VFLQE+      +  
Sbjct: 27  FTVLTVNTHKGFTALNRRF----------ILPELREAVRSVSADVVFLQEVHGTHEHHPQ 76

Query: 80  VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +P      F +        + +           A+  K   +   +  +  +    
Sbjct: 77  RYSNWPSMPQYEFLADSLWPQFAYGRNAVYPAGDHGNALLSKFQIIRHDNLDVSISGH-- 134

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
               NR  +  ++ + G    V  I +                     +Q + L   +++
Sbjct: 135 ---ENRGMLHSVLRLPGDGPQVHAICVHLGLREG-----------HRVEQLKLLCQRLSE 180

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P ++AGDFN               ++P      F ++      +       + +
Sbjct: 181 -LPPDAPVIVAGDFNDWRGKASE------LLEPCGLREVFAEQWGKPARSFPARLPILRL 233

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +       L       +             LSDH P+S++ +
Sbjct: 234 DRIYVRN-----LKAHHPKVLNV------RPWSHLSDHAPLSVEIE 268


>gi|299141239|ref|ZP_07034376.1| exodeoxyribonuclease III [Prevotella oris C735]
 gi|298577199|gb|EFI49068.1| exodeoxyribonuclease III [Prevotella oris C735]
          Length = 250

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 83/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G                   Q  + L+AD   LQE     A    
Sbjct: 1   MKFISWNVNGLRACVGKDF---------------SQSFETLNADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  +   +       +   D   R    
Sbjct: 45  LQFPGYTSYWN----------YADKKGYSGTAIYARKEPIAVTYGIGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                         + ++  + +   
Sbjct: 91  -----VITLEYDNFFLVTVYTPN-------AQDGLRRLDYRMTWEDDFQAYL-HRLDEQK 137

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                         +   + +    +        +    +
Sbjct: 138 PVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEEREKMTQLLSHGFTDTFRTLYPEQVTYS 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R +         IDYF++       L   S    ++            SDHCPI +
Sbjct: 198 WWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIHTEIF-----------GSDHCPIEV 246

Query: 301 DYD 303
           D +
Sbjct: 247 DLE 249


>gi|297570782|ref|YP_003696556.1| LPXTG-motif cell wall anchor domain protein [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296931129|gb|ADH91937.1| LPXTG-motif cell wall anchor domain protein [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 1016

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 96/349 (27%), Gaps = 68/349 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGV------------------SLWKNSVKRTTSDYT-- 55
                   + + S+N+       G                   +        +   +   
Sbjct: 501 APQFTEGNLSITSFNVLNYFTTLGEEFKCKGYSSHDGIQLTSNNTCNARGAASQKAFEMQ 560

Query: 56  --LLRQYAKNLDADIVFLQEMGSY---------------NAVAKVFPKNTWCIFYSTERL 98
              + +    LD+ IV L+E+ +                 A+ K   +  W    S    
Sbjct: 561 QSKIVKAINALDSSIVGLEEIENSVKFGKDRDTALNALVAALNKDAGREKWVAVKSPAAD 620

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GK 155
              +  D  + I  A   +K  V+ + +S  L+  K             + +E     GK
Sbjct: 621 KLPA-LDKQDFIRLAFIYQKDKVKTVGESEVLIDGKQWAYARQPLAQKFVALENGKESGK 679

Query: 156 KIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
              ++  HLKS        +        +  L   Q   +  W+ + K +  P  I GD 
Sbjct: 680 PFVIVVNHLKSKGSDKDPGHPDDGFQGNNNHLRVLQVTEMAQWVAK-KFADEPVFILGDL 738

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N              T++         ++   + ++ +       +D+ + +  A   + 
Sbjct: 739 NSYTFEDP-----LMTLEKEFGYTSIAQKTGIKNHSYQYGGLVGSLDHALGNPAAMAMVK 793

Query: 272 QESFSEILYNEDDIKSRGK-----------------RLSDHCPISIDYD 303
                 +   E       +                 R SDH PI +  +
Sbjct: 794 AADVWNVNAMEPLAFEYSRYNYNINYKNLFDAASPFRSSDHDPIKVAIE 842


>gi|295397847|ref|ZP_06807910.1| exodeoxyribonuclease III [Aerococcus viridans ATCC 11563]
 gi|294973892|gb|EFG49656.1| exodeoxyribonuclease III [Aerococcus viridans ATCC 11563]
          Length = 275

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+     +  +  + R       + +  +    D++ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGASPRAELSR------EVLKMIREHQPDVIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +         +++  S  +     +       K     + ++P +GA  +    G  
Sbjct: 55  KHLDIIEADVPDYKVVWVSSVEPARKGYAGTMFLYKKDYTPEVTFPQIGAPTTMDYEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V +++  +     +            +     L        ++  
Sbjct: 114 -----MITLEFTDFYVTNVYTPNAGSALARLEDRQVWDVQYANYLADL--------DAKK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                           +  +        F           
Sbjct: 161 PVIACGDFNVAHTEIDLAHPKNNHFSAGFTDEERAGFTNLLNRGFTDTFRHIHGDVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +    +           DH PI
Sbjct: 221 TWWAQRVKTSKINNSGWRIDYWLVSDRIADKVQKSEMLDSGTRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 LLEID 274


>gi|328785734|ref|XP_395633.4| PREDICTED: putative neutral sphingomyelinase-like [Apis mellifera]
          Length = 393

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 81/289 (28%), Gaps = 34/289 (11%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           NI TL+      +  N   R     T +       + DI+ LQE+ S N    +  K   
Sbjct: 8   NILTLNCWGIPYVSPNRSAR----MTAIADKFATENYDIICLQEIWSINDFKMIKAK--- 60

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144
                T+  + +S    +  I + + +  K        +                 G + 
Sbjct: 61  -----TQEQLPYSHYFYSGVIGSGLCILSKFPIKDVIFHKWPLNGYVHKIHHGDWFGGKG 115

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                ++I+   + V   HL +               +    QA     +I         
Sbjct: 116 VGLCKLQIHNWNVNVYIAHLHA-----EYNRHNDEYIAHRVLQAFDTAQFIRMTSGGADS 170

Query: 205 FVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            ++ GD N +   L            D    +     +         +  +AN     K 
Sbjct: 171 TILGGDLNTEPQDLVYRIICGVAGLTDACSNSSSNLGTNECANNSYTNTKHANTFPDGK- 229

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            ID+ +        +   +F       + I  +    SDH  I   + F
Sbjct: 230 RIDHILYQGTKNVKIEIINFQHPF--PNRIPYKNFSYSDHEAIMATFKF 276


>gi|325180868|emb|CCA15278.1| DNA(apurinic or apyrimidinic site) lyase putative [Albugo laibachii
           Nc14]
          Length = 475

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 81/320 (25%), Gaps = 61/320 (19%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
           ++VSWN+N L                  D   L  +   L A I+  QE  +       +
Sbjct: 5   KIVSWNVNGLRAI------------LQRDKVKLNDFLHALQASIICFQETKLTRSELDEE 52

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-------PLLGAKD 135
           +     +  FYS  R+ N               VR     +  +                
Sbjct: 53  LACPKDFDAFYSHCRVRNGYSGVV-------TFVRSDLPTIAAEEGLTGMWTRKDTIGHV 105

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +   A     +   +E  G+ +            +                  + L   I
Sbjct: 106 NMGDAEIPSQMLSELESEGRSVITDHGAFILIN-VYCPAIRNEERLEYKIAFHELLTRRI 164

Query: 196 TQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIR--- 236
              +++    V+ GD N     + +                     + I     L     
Sbjct: 165 QTLRKASKRVVLVGDLNVASKRIDHCEPKASEFGEFEAHPCRKWLHRLISSPAPLRDIYR 224

Query: 237 ---FPKEKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQE------SFSEILYNED 283
                K+K   C               IDY ++D+     ++        S  E      
Sbjct: 225 KLYPDKKKAFTCWNTATMARKNNYGTRIDYILVDEKLQDSVLSCRSFAFKSILEKWLTLA 284

Query: 284 DIKSRGKRLSDHCPISIDYD 303
                 +  SDHCP+  + D
Sbjct: 285 IRLDPERLGSDHCPVFAEID 304


>gi|300742521|ref|ZP_07072542.1| exodeoxyribonuclease III [Rothia dentocariosa M567]
 gi|300381706|gb|EFJ78268.1| exodeoxyribonuclease III [Rothia dentocariosa M567]
          Length = 278

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/305 (8%), Positives = 73/305 (23%), Gaps = 66/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  +    + D++ LQE  + +     
Sbjct: 12  MKIATWNVN----------------SIRARADRIEDWLDKTEVDVLALQETKTKDE---- 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + +       +    +A+  +      +                 
Sbjct: 52  ------TFPFELFEFLGYEVAHYGLNQWNGVAIASRVGLDSVERT-FPNQPAFGKPGDPA 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201
                 +      + +  +++ +   L      Y        +  + L+  +      + 
Sbjct: 105 EVEARAIGATCNGVRIWSLYVPNGRGLTDPHMAYK------MEWMRQLRTNVNGWLHADP 158

Query: 202 LVPFVIAGDFNRKIN------------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243
              F + GD+N                           + F+  ++    +         
Sbjct: 159 AAQFALVGDWNVAPEDTDVWDIDFFRENDLTHVSAPEREAFYALLNDEGLIDPVRPYTQG 218

Query: 244 RCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                     +      + ID+ +        +            D  +  G   SDH P
Sbjct: 219 EYTYWDYQAGRFSKNEGMRIDFQLCSPALAARVENAWI-------DREEREGDGASDHTP 271

Query: 298 ISIDY 302
           + I+ 
Sbjct: 272 VVIEL 276


>gi|332827620|gb|EGK00362.1| hypothetical protein HMPREF9455_03315 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 306

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 77/337 (22%), Gaps = 67/337 (19%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
           M     L L+ F++  T +  +         + ++S+NI     +               
Sbjct: 1   MKNISGLILLSFILLTTTASCRNKQNSEPVSLNVMSFNIWMGGGKS-------------- 46

Query: 53  DYTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                 +   N  ADIV +QE      N   ++     W  +                  
Sbjct: 47  -IEATAEVLVNSGADIVGIQEATRKDQNTAKQIADSLNWHSYVYGRST------------ 93

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
               A+  K   V                         L+    +   +  I      FL
Sbjct: 94  ----AIISKYPIVDTSENKQGVKIKIDDSHFVWMFNVHLIHCPYEPYQLNGIEYCGAPFL 149

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
            +       + +   ++ +     I   ++   P  + GDFN        +      +  
Sbjct: 150 STEAEAIESAKNSREKEVKSNIADILTVQKEGYPVFLTGDFNEPSCLDWTDKAAEAKLCK 209

Query: 231 NDSLIR-----------------FPKEKDSRCNANK-------NLRNKIPIDYFVMDQNA 266
                                  +P E  +  +                 ID+       
Sbjct: 210 TAVAWPSTKAFIDSGLKDSYREKYPDEAKNPGHTWTTLPETKAYTEVPDRIDFVFFSGEN 269

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            K   + S      +           SDH  +   + 
Sbjct: 270 IKL--ENSQIVGEESPFSNIKFNNYPSDHRAVLSTFT 304


>gi|226949104|ref|YP_002804195.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|226842810|gb|ACO85476.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A2 str. Kyoto]
          Length = 360

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 101/311 (32%), Gaps = 44/311 (14%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               +V++NI               G     +S ++T  +   +  + K  ++  +FLQE
Sbjct: 61  DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQE 120

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127
           + + +   + F  + +    ++ +  + S   +       + + K +  V      L + 
Sbjct: 121 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLANLSKY 178

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 +  +    +       ++    +  V   + +    ++S  + Y     +  QQ
Sbjct: 179 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQ 238

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236
             +LK++I ++ +     ++ GD+N  I               D   K  +    +    
Sbjct: 239 LSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 298

Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID F++  N     ++       Y+ +   +    
Sbjct: 299 VADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNIEATSVKA------YSMEFKNT---- 348

Query: 292 LSDHCPISIDY 302
             DH P+ +++
Sbjct: 349 --DHNPVKMEF 357


>gi|89075216|ref|ZP_01161647.1| hypothetical extracellular nuclease [Photobacterium sp. SKA34]
 gi|89049038|gb|EAR54605.1| hypothetical extracellular nuclease [Photobacterium sp. SKA34]
          Length = 777

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/383 (12%), Positives = 97/383 (25%), Gaps = 105/383 (27%)

Query: 24  VRLVSWNINTLSE---QEGVSLWKNSVKRTTSDYTL------------------LRQYAK 62
           +++ S+N+          G SL      +  +D                     +     
Sbjct: 298 LKVASFNVLNFFTSHSDIGGSLNPTCKDQADADAAKGCNRGAKTAAEFELQRTKIVNALT 357

Query: 63  NLDADIVFLQEMGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNN 108
            +DADI+ + EM +      +A+  +  +         + +      ++  N  K   ++
Sbjct: 358 AMDADIIGIMEMENNGFGKNSAIKNLVDELNLHFNDSSDHYQFVEINDKDKNKGKFFGSD 417

Query: 109 DIHTAIAVRKKN--VRVLQQSYPLLGAKDSFSRAG---------NRRAVELLVEINGKK- 156
            I  A+  R          Q   +     S + A           R  +     ING K 
Sbjct: 418 AIMVAMLYRPSKVTPIKDAQVIRMPSQHMSATNAEGEGVKIDAYQRDTLLQQFAINGAKK 477

Query: 157 ---IWVLDIHLKSFCF-----------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + ++  HLKS                  +N            A  L D +       
Sbjct: 478 KSQLTIVVNHLKSKGSGCYEDWLNEQKDKDYQNIQGNCNDFRVSAAMVLADRLKTISGD- 536

Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPN-------------DSL 234
              ++ GD N                              I                  +
Sbjct: 537 --VLVMGDMNAYGMEDPIRVLTQYKPKQYQRKIMSASGTFIGDQSLHPEGIVASKGLGLV 594

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
               K   +   +         +D+ +  ++  K +       I   E+ +     +   
Sbjct: 595 NLATKWHGADSYSYSYNGELGSLDHALASRSLLKKVRGIEDWHINSVENSLFEYSNKYSG 654

Query: 292 ----------LSDHCPISIDYDF 304
                      SDH P+ I++ +
Sbjct: 655 DLVKSTGPYSASDHDPVIINFAY 677


>gi|309812281|ref|ZP_07706036.1| exodeoxyribonuclease III [Dermacoccus sp. Ellin185]
 gi|308433586|gb|EFP57463.1| exodeoxyribonuclease III [Dermacoccus sp. Ellin185]
          Length = 262

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/306 (9%), Positives = 72/306 (23%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  + +  D D++ +QE    +     
Sbjct: 1   MRIATWNVN----------------SIRTRVDRVIAFLERGDVDVLAMQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +       +    +A+  +      Q    +G +D        
Sbjct: 41  ------QFPMARFEEAGYEVAHHGLNQWNGVAIASRVGLEDVQ----IGFEDMPGFGDPI 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
            A    +      + +  +++ +   +      Y             L+    +      
Sbjct: 91  AAEARAIAATCDGVRMWSLYVPNGREIGHPHYEYKLD------WLAALRADGEKWLTENP 144

Query: 203 -VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                + GD+N                         D ++ +             +    
Sbjct: 145 EAQIALTGDWNIAPRDEDVWDPAFFEGKTHVTQPERDAFQAMIDTGYADVVRPHTNEP-R 203

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +        +            D  + +GK  SDH P
Sbjct: 204 TYTYWDYTQLRFPKKQGMRIDFALCSPALAGRVQGAVI-------DRDERKGKGASDHAP 256

Query: 298 ISIDYD 303
           + +  D
Sbjct: 257 VIVQLD 262


>gi|296313703|ref|ZP_06863644.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768]
 gi|296839722|gb|EFH23660.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768]
          Length = 259

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           ++++S N+N +        +               +Y     ADIV +QE+ +  A   A
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +    ++       +S                            +G         
Sbjct: 47  DMKNPHGMHGYWHCAEKRGYSGVAVYGKRKPDNV--------------QIGMGIEEFDRE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V  +  ++ V+ ++L S    +  +        +  +        +   K  
Sbjct: 93  GRF-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246
               V+ GD+N     +   +      +                        +       
Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDNP 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++        +                + ++ SDH P
Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAVKAVSAHV-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           + ++YD+
Sbjct: 250 LVVEYDY 256


>gi|19527895|gb|AAL90062.1| AT13596p [Drosophila melanogaster]
          Length = 603

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 86/336 (25%), Gaps = 46/336 (13%)

Query: 14  VPCTASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
              + S + ++R+VS+N+          +     S       +      L        ++
Sbjct: 266 TTNSLSESNEIRVVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFINEIIGYNS 325

Query: 67  DIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           DI+ LQE+        + ++  +  +            ++  +    ++   +    +  
Sbjct: 326 DILCLQEVDQRIFDFDLKEILEQPPYNYHGIMAPKGKCAEGVAIFFRNSRFDLLDSQILH 385

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELL-------------VEINGKKIWVLDIHLKSFCFL 170
           L  + P+L   +S        A                 + I G   +VL  +   +   
Sbjct: 386 LGSNIPVLPVFESLWNKIKVNAQLAERICERSTTLQTCLLRIKGTDNYVLVANTHLYFHP 445

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFNRKINYLGNNDDFWKT 227
           D+           +    Q +   I          +  +  GDFN      G      + 
Sbjct: 446 DADHIRLLQMGFSMLFVEQSINKAIKDFNIGSPKNIGLIFCGDFNSVP-ECGIYKLMTEQ 504

Query: 228 IDPNDSLIRFPKE------------------KDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           +                                +    +        +DY     + ++ 
Sbjct: 505 LAEKTLEDWQSNAEQAVSNVELAQPFKMGSAYGAPEYTHYTTLFAGCLDYVFYQNDRFEL 564

Query: 270 LIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           L      +E     +         SDH  +  D  F
Sbjct: 565 LKVVPLPTEEELKANTAIPSAVFPSDHVALVADLKF 600


>gi|53715705|ref|YP_101697.1| hypothetical protein BF4425 [Bacteroides fragilis YCH46]
 gi|60683643|ref|YP_213787.1| hypothetical protein BF4223 [Bacteroides fragilis NCTC 9343]
 gi|253566481|ref|ZP_04843934.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|52218570|dbj|BAD51163.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60495077|emb|CAH09896.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
 gi|251944653|gb|EES85128.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301165155|emb|CBW24725.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 365

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 87/302 (28%), Gaps = 64/302 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++L+S+NI +    +  +               +  Y KN +ADIV +QE        
Sbjct: 99  NSIKLLSYNIMSFGNMKKENGQNP-----------ILNYIKNSNADIVCMQEYAGSETAK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                             N  K+       + +A   K   +  +            R+ 
Sbjct: 148 IHLSNKEIRQALKDYPYHN-IKQVGKTGAGSQLACYSKFPILSAR--------MLDYRSN 198

Query: 142 NRRAVELLVEINGKKIWVLDIHLKS-----------------------FCFLDSLENTYS 178
              ++   ++I    + +++ HL+S                          +  L N  +
Sbjct: 199 YNGSMVYEIKIGKDTVLLINNHLESNKLTREDKVVYEDMLKDPKAGKVKSGVRQLVNKLA 258

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ S QA+ +   I          ++ GDFN       +       +   D    F 
Sbjct: 259 EASAIRSAQARTIAQEIAHSPYPS--VIVCGDFNDSPISYAHR------VISQDMDDAFT 310

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++ +N          +     +D         SDH PI
Sbjct: 311 ESGCGLGISYNQNKFYFRIDNILVSKNL----KASGCTVDNSIKD---------SDHYPI 357

Query: 299 SI 300
             
Sbjct: 358 WC 359


>gi|260592674|ref|ZP_05858132.1| exodeoxyribonuclease III [Prevotella veroralis F0319]
 gi|260535444|gb|EEX18061.1| exodeoxyribonuclease III [Prevotella veroralis F0319]
          Length = 249

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L    G                   Q  K+ +AD   LQE     A    
Sbjct: 1   MKLISWNVNGLRACVGKDFE---------------QQFKDFNADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  ++  +       +   D   R    
Sbjct: 45  LSFPGYESYWN----------YADKKGYSGTAIFTRHKPLSVTYGIDIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                   +     + ++  K + + 
Sbjct: 91  -----VITLEMDDFYLVTVYTPN-------SQDELRRLEYRMKWEDDFQSYL-HKLDEIK 137

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                             + +             +    +
Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQKMTQLLSNGFIDTFRTLYPEQVTYS 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R +         IDYF++ +     L+       +             SDHCPI I
Sbjct: 198 WWSYRFRAREKNTGWRIDYFLISERLRDRLVDAKIHTEI-----------MGSDHCPIEI 246

Query: 301 DY 302
           D 
Sbjct: 247 DL 248


>gi|304407353|ref|ZP_07389006.1| exodeoxyribonuclease III Xth [Paenibacillus curdlanolyticus YK9]
 gi|304343794|gb|EFM09635.1| exodeoxyribonuclease III Xth [Paenibacillus curdlanolyticus YK9]
          Length = 255

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y    DADI  LQE        ++
Sbjct: 1   MKLISWNVNGLRACVTKGFM---------------DYFNESDADIFCLQETKLQAGQIEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +++           +    ++  AV  K   +  +      ++D        
Sbjct: 46  PLEGRYSQYWN----------YAVKKGYSGTAVFTKVEPLTVRYGIEEDSEDEGR----- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + ++++++  +     S                  L        ++  
Sbjct: 91  -----ILTLEFDRFYLVNVYTPNAKRDLSRLGYRLEWEDRFRAYLLEL--------DAQK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                        +  +  +  F      R +A 
Sbjct: 138 PVIVCGDLNVAHQEIDLKNAKSNHGNSGFTTEERGKMTDLLESGFIDTFRHLHPERDDAF 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+                  +  D         SDHCP+ 
Sbjct: 198 SWWSFMPKVRERNIGWRIDYFLASARLA-----------PHVTDAGIDSAILGSDHCPVM 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 VQLE 250


>gi|237740619|ref|ZP_04571100.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp.
           2_1_31]
 gi|229422636|gb|EEO37683.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp.
           2_1_31]
          Length = 286

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 94/308 (30%), Gaps = 39/308 (12%)

Query: 1   MIRKYVLA----LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + +K  L     L+ F +  T S A +  + S+NI  L                  D   
Sbjct: 7   LKKKLSLFIVSVLMIFTMFSTISSADEAYIASFNILRLGA-------------AEKDMVQ 53

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIA 115
             +  +    D+V L E+ +   + ++  +       + E  I+     S+    +    
Sbjct: 54  TAKLLQGF--DLVGLVEVINKKGIEELVDELNRQSPNTWEYHISPFGVGSSKYKEYFGYV 111

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
            +K  V+ ++        K S      R       +I      ++ +H            
Sbjct: 112 YKKDKVKFIKSEGFYKDGKSSL----LREPYGATFKIGNFDFTLVLVHTIYG-------- 159

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                    + +   + D+   K +     +IAGDFN       +    +K  D     I
Sbjct: 160 NNESQRKAENFKMVDVYDYFQDKDKKENDILIAGDFNL-YALDESFRPMYKHRDKITYAI 218

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
               +         N       D F   Q         S   + ++E D +   + +SDH
Sbjct: 219 DPAIKTTIGTKGRANSY-----DNFFFSQKYTTEFTGSS-GALDFSEKDPQLMRQIISDH 272

Query: 296 CPISIDYD 303
            P+ I  +
Sbjct: 273 IPVFIVVE 280


>gi|310659330|ref|YP_003937051.1| exodeoxyribonuclease III [Clostridium sticklandii DSM 519]
 gi|308826108|emb|CBH22146.1| exodeoxyribonuclease III [Clostridium sticklandii]
          Length = 250

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                        +Y   ++ADI  +QE         +
Sbjct: 1   MKLISWNVNGIRACVKKGF---------------LEYFDEVEADIFCIQETKLQEGQIDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    +             +    ++  AV  K   +       +   D+  R    
Sbjct: 46  MLNDYEQYW-----------NYAEKKGYSGTAVFTKIKPISVAYGIDIEHHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     ++++++  +     +             +    L        +   
Sbjct: 91  -----VITLEYDNFYLVNVYTPNAQPKLARLEYRMQWEDDFRRYLNDL--------DEKK 137

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +  +  +  F           
Sbjct: 138 PVIVCGDLNVAHNEIDLKNPKSNRKNPGFSDEERGKFTNLLDSGFIDSFRFFYPDATEMY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +       L                      SDHCP+ 
Sbjct: 198 TWWSYRFNARENNAGWRIDYFCVSNKLKNELKNAEIH-----------MDILGSDHCPVV 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEI 249


>gi|21361254|ref|NP_005214.2| deoxyribonuclease-1 precursor [Homo sapiens]
 gi|118919|sp|P24855|DNAS1_HUMAN RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I; AltName: INN=Dornase alfa; Flags:
           Precursor
 gi|181624|gb|AAA63170.1| DNase I [Homo sapiens]
 gi|3273382|gb|AAC24721.1| DNaseI [Homo sapiens]
 gi|10798586|emb|CAC12813.1| DNAse I [Homo sapiens]
 gi|20810454|gb|AAH29437.1| Deoxyribonuclease I [Homo sapiens]
 gi|67107113|gb|AAY67835.1| codon-optimized DNase I [synthetic construct]
 gi|109809707|dbj|BAE96965.1| deoxyribonuclease I splicing isomer 2 [Homo sapiens]
 gi|119605750|gb|EAW85344.1| deoxyribonuclease I, isoform CRA_b [Homo sapiens]
 gi|123982566|gb|ABM83024.1| deoxyribonuclease I [synthetic construct]
 gi|123997231|gb|ABM86217.1| deoxyribonuclease I [synthetic construct]
 gi|307685305|dbj|BAJ20583.1| deoxyribonuclease I [synthetic construct]
          Length = 282

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 84/283 (29%), Gaps = 30/283 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E               +  + + Q       DI  +QE+   +  AV
Sbjct: 22  SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+          +   +++     ++         R   V  +   Y   G +   +  
Sbjct: 71  GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            NR    +       ++    I        D++    +     L  Q +W          
Sbjct: 131 FNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW---------- 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            L   ++ GDFN   +Y+  +      +  + +      +         +       D  
Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAY----DRI 236

Query: 261 VMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300
           V+        ++ +S     +      S    + +SDH P+ +
Sbjct: 237 VVAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 279


>gi|261819592|ref|YP_003257698.1| endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae
           WPP163]
 gi|261603605|gb|ACX86091.1| Endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae
           WPP163]
          Length = 381

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 83/275 (30%), Gaps = 27/275 (9%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           ++       +    L+ADI+   E+ + + +     +      +S   +I+         
Sbjct: 111 SSQQRKNTGKIINLLNADILCAVEVENMDVLRDFNSQVLGKKKFSQFVMIDSPN--DPRG 168

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           I  A   R +  ++      +  A   F    +R  +E+ ++   K+  +  +       
Sbjct: 169 IDVACLTRYRIAQL---RTHIFDAGKQFDPVFSRDCLEVTLDAGLKQ-PIYILCNHFKSQ 224

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTI 228
               E            Q++ + + + Q  +      VI GD N   +    +     ++
Sbjct: 225 SGQTEQERQRGAQKRRDQSERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWQSLAPLFSL 284

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEI------ 278
                +I   + +  R         K      +DY  +    ++ ++             
Sbjct: 285 SDLHPVIDPERPEKERYTYYFAGGKKGARLNQLDYIFLSAPLHQAMVGWGVERRGIYNID 344

Query: 279 ----------LYNEDDIKSRGKRLSDHCPISIDYD 303
                     +    ++ S     SDH  + ++ D
Sbjct: 345 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 379


>gi|303314689|ref|XP_003067353.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240107021|gb|EER25208.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 290

 Score = 81.1 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 87/289 (30%), Gaps = 21/289 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        K   +R       L  + ++     + LQE+        
Sbjct: 8   SIRILTHNIRY-ATSRPFKGEKPWPERKHLVLNELIFHTRHNAESFICLQEVLRVQLEDV 66

Query: 83  VFP----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +       +TW            +   S       +   +    V     P + +K  + 
Sbjct: 67  LSGLNSHGDTWAYIGVGRDDGKQAGEYSPIFYRPDVWKLETWETVWLSETPEVPSK-GWD 125

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A  R     +      +  VL +        D    +   S  L+    + +  ++ + 
Sbjct: 126 AASIRIVTVGVFRHRASRKTVLAMSTHL---DDQGSKSRYESAKLI---LRTIDGYLHKF 179

Query: 199 KESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANK-NLRNK 254
           K+ +    +AGDFN ++N        D     +D  D +    +  +            +
Sbjct: 180 KDRISGLFLAGDFNSEVNQEAYQVFIDPTSPLVDARDQIKPDERYGNEITYTGFGYEGER 239

Query: 255 I-PIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISID 301
              IDY ++     +      ++   Y    +    G   SDH  +  D
Sbjct: 240 ETRIDYILVGPKTEQGF---PWTVKQYGVLPNKFDDGVFSSDHRAVVAD 285


>gi|331015775|gb|EGH95831.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 233

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 41/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107
              LR+  +++ ADIVFLQE+    ++   +V    T   +     S      + +    
Sbjct: 12  LPELREAVRSVSADIVFLQEVHGEHHSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVY 71

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            D     A+  K   +  ++  +            R  +  ++++      V  + +   
Sbjct: 72  PDGDHGNALLSKYPIIQHENLDVSIDG-----TEQRGLLHCILQVPDHG-QVHAVCVHLG 125

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
            F            S   QQ + L   + +      P ++AGDFN               
Sbjct: 126 LF-----------ESHRRQQLKLLAQLMDR-LPEGAPVIVAGDFNDWRQRAD------AL 167

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +        F +   +   +       + +D   +           S             
Sbjct: 168 LQGTGLHEVFVQRFGAPAKSFPARWPLLRLDRIYVRNATSHRPKVLS-----------SR 216

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P++++  
Sbjct: 217 PWSHLSDHAPLAVEVT 232


>gi|307130571|ref|YP_003882587.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya
           dadantii 3937]
 gi|306528100|gb|ADM98030.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya
           dadantii 3937]
          Length = 256

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 85/293 (29%), Gaps = 49/293 (16%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              S+     +++ N +             S          LR   +++ ADIV LQE+ 
Sbjct: 5   SQPSLGFSFTVLTINTH----------KGFSALNRRFILPELRDAVRSVSADIVCLQEVL 54

Query: 76  SYNAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYP 129
             ++   +    +P  +   F +     +++        +     AV  +      ++  
Sbjct: 55  GRHSTHPLQVEHWPDTSHYEFLAETMWNDYAYGRNAVYPEGDHGNAVLSRFPIFSYRNLD 114

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +  ++ +      R  +  ++++  + + +  + +                 S   QQ  
Sbjct: 115 VSVSERTK-----RGILHCVLKVPNRDLHIHVVCVHMGLT-----------ASHRRQQMA 158

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L D +     +  P ++AGDFN         +   K          F +          
Sbjct: 159 LLCDLLAT-LPAEAPLIVAGDFNDWQMKA---NALLK--RSAGLEEVFSQHFGKPARTFP 212

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +D   +                             LSDH P++++ 
Sbjct: 213 ARFPLLCLDRIYVRNAR-----------TSVPRLLPPKPWSHLSDHAPLAVEI 254


>gi|328881588|emb|CCA54827.1| putative large secreted protein [Streptomyces venezuelae ATCC
           10712]
          Length = 620

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 82/327 (25%), Gaps = 69/327 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            ++ + ++N+  L   +               +  L +         DI+ L+E+     
Sbjct: 315 NELAVATYNVENLDPSDP-----------QEKFDALAKAVVENLASPDILALEEIQDNTG 363

Query: 80  VAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                               V        + S +   N    +   +I        + V 
Sbjct: 364 AKNDGTVAADLTVKKFTDAIVAAGGPAYEWRSVDPENNKDGGEPGGNIRQVFLFNPERVS 423

Query: 123 VLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
              ++                      P      + +   +R+ +       G+ ++V+ 
Sbjct: 424 FTDRAGADATTATAVTGRKGHAELTLSPGRIDPANTAWEASRKPLAGEFVFRGRTVFVIA 483

Query: 162 IHLKSFCFLDS----LENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
            H  S    +S     +     S +    QAQ +  ++ Q    E     ++ GD N   
Sbjct: 484 NHFGSKGGDESIVSHHQPPVRSSEAKRLLQAQAVNGFVKQLLAVEKQADVLVVGDINDFE 543

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                        D             S   +     N   +D  +     + F      
Sbjct: 544 FSGTTK----ALTDGGALYPAVKSLPRSERYSYVFQGNSQVLDQILTSPGVHHFEYDSVH 599

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
               + + D        SDH P  + +
Sbjct: 600 INAEFADQD--------SDHDPQVLRF 618


>gi|256396175|ref|YP_003117739.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256362401|gb|ACU75898.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 1007

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 92/290 (31%), Gaps = 44/290 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             + ++   +R+++WN            +   + RT     +L    +  D D++ LQE 
Sbjct: 113 ASSPAIGLDLRILTWNTLW-------DRYDKDLIRTAERRPMLLAALRAADVDVIALQEA 165

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                V  +  ++     +            S++   + + V  +   V    + L    
Sbjct: 166 E-PALVKMLLAED-----WVRREWTLGGDPRSSDVADSGVLVLSRLPVVEAGWHAL---- 215

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   +    ++VE     + V + HL S    D          SL ++Q   L D 
Sbjct: 216 -----GRYKAVAAVVVEGGAGPVVVANTHLSSDHSADG--------ASLRTEQLGQLADG 262

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA----NKN 250
           +       VP V+ GDFN   +   +             +       D   N     +  
Sbjct: 263 LRAI--DAVPVVLVGDFNDDTDAPASRLGMTDAWTQVHGVADDTATFDPSANPLAAVSSL 320

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +   +D  +        L+  + S++    +   + G  +SDH  I+ 
Sbjct: 321 TGDAKRLDRVL--------LLGATASDVRLIGEVPNADGLFVSDHYGITA 362


>gi|308273030|emb|CBX29634.1| hypothetical protein N47_J06150 [uncultured Desulfobacterium sp.]
          Length = 273

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/294 (10%), Positives = 77/294 (26%), Gaps = 33/294 (11%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F +    +S  + + ++S N+     ++G + W +                   + D   
Sbjct: 9   FLMNNTISSGTRFLSVMSLNLRFGLAEDGPNNWIHRKISFMP-------LLSTFENDFYA 61

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
            QE   +           +      +    + + +      +   V   +  +       
Sbjct: 62  FQEANDFQIDFLSDLLPDYNYIGRRQPAPAYWQHNIIFYNKSWKCVYCNHFYLSSTPN-- 119

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                       R+    +     + + +++ H      +                 A+ 
Sbjct: 120 -MPSRFRGSKWPRQCTLGIFNNGLQNLIIVNTHFDFSSDVQVKS-------------AKL 165

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           ++  + +  +   P ++ GDFN   +    N+   K          F       C+    
Sbjct: 166 IRKRLRRHSKKG-PIILMGDFNATPDSGCYNEFTSKVDAYPKFFDAFNNSAIRTCHRFSG 224

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 ID+ +   N                    K  G+  SDH P+   + F
Sbjct: 225 KNKGEAIDWILYSGNLI---------IDNSQVITSKFSGRYPSDHYPLIASFVF 269


>gi|227535760|ref|ZP_03965809.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33300]
 gi|227244248|gb|EEI94263.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33300]
          Length = 255

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/298 (10%), Positives = 74/298 (24%), Gaps = 62/298 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L                         + K+ +AD++ LQE+ +   +   
Sbjct: 1   MKIITYNVNGLRAALKKGW---------------LDWLKSTNADVICLQEIKATPDLIPE 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   F                  ++  A+  K      +     G          R
Sbjct: 46  IALLEQLGFEHYWYPAQ-------KKGYSGTAIFTKVSPKRVE----YGCGHELYDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  + +K  V+  +  S    ++ +           Q +  L   I        
Sbjct: 95  I-----IRADFEKFSVMSTYFPSGTTGEARQTFKYQFLDDFQQYSDRLLKDIPNLIVCGD 149

Query: 204 PFVIA---------GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             +            + N         +     I+     +   +  +   +       +
Sbjct: 150 YNICHRAIDIHNPKSNANTSGFLPEEREWMENFINSG--YVDSFRHLNPEPHQYSWWSYR 207

Query: 255 ---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      IDY ++       + +                    SDHCP+ ++  
Sbjct: 208 AGARARNLGWRIDYNMVSAPLASQIEKS-----------YLLNDAVHSDHCPVVVEIS 254


>gi|332830343|gb|EGK02971.1| hypothetical protein HMPREF9455_01221 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 330

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/330 (11%), Positives = 92/330 (27%), Gaps = 55/330 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAK-----N 63
             +  R++ +N+  + + +      +           +  R       +           
Sbjct: 5   AQENFRIMFYNVENMYDIKDNPETNDDDLTPSGQLHWTSYRYWKKLNDISTVISSVGDDR 64

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
               +V + E+ + + +  +  +           + N      N   +TA+  ++  +++
Sbjct: 65  YPPALVGICEVENDSVLFDLTRRAGLRKHKYEYIITNSK---DNRGSNTALLYQRDQIKI 121

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           + +        +S      R  + +  + IN + + +   H  S           +    
Sbjct: 122 ISKR-SYTPTLESDPSKTTRDILHVTGKVINDEILDIFVCHFPSRREG----IKRTRPDR 176

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------TIDPNDSLIR 236
           +   +   LK     +       +I GDFN   N +  ++            D N   + 
Sbjct: 177 IRCAELLRLKADSLFRIRKKANIIIMGDFNDYPNDISLSESLGAHSIKSPVTDKNLYNMF 236

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI------------------ 278
           + +  +    + K       ID F++  N  K   + S  +                   
Sbjct: 237 YHRLGEKNAGSYKYKGKWNFIDQFIISGNLLKPSCKISIKDKDAHIYSASFLLHDDNTKS 296

Query: 279 ------LYNEDDIKSRGKRLSDHCPISIDY 302
                               SDH PI +D 
Sbjct: 297 GGGGQKPLRTYSGFKYPGGYSDHLPIYMDL 326


>gi|291516724|emb|CBK70340.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. longum F8]
          Length = 286

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 78/311 (25%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81
            + + + N+N +                 +    +  +A     D+  +QE+ +    V 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCMQEVRAPQEDVD 46

Query: 82  KVFPKNTWCIFYSTERLINHS----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +    + +                     + +        ++       +D  
Sbjct: 47  SIFGEFGFEYATAGKIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPGLGEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  I V  +++ +    DS +         L      + +   +
Sbjct: 107 S---GRWIETDVKTPQGYTITVACVYVHAGNTDDSTKMEQK--YRFLDTMLTRMGELRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +D  + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +       +   +  D   +   R 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYELRW 274

Query: 293 SDHCPISIDYD 303
           SDH P++I YD
Sbjct: 275 SDHAPLTITYD 285


>gi|325673954|ref|ZP_08153644.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707]
 gi|325555219|gb|EGD24891.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707]
          Length = 259

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/280 (10%), Positives = 59/280 (21%), Gaps = 54/280 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +    +  +    D D++ +QE    +              Y       +         
Sbjct: 5   RARTDRIVDWLARTDTDVLAMQETKCKDE----------QFPYERFTEAGYEVAHVGLSQ 54

Query: 111 HTAIAVRKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
              +A+  +      Q       G          R A  +   + G  + V  +++ +  
Sbjct: 55  WNGVAIASRIGLEDVQVGFADQPGFNKDPEAEATREARAIGATVGG--VRVWSLYVPNGR 112

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLG------- 219
            L      Y        +    L+                + GD+N              
Sbjct: 113 ELTDPHYVYK------LEWLAKLRADAEGWLAGNPDAQIALVGDWNVAPTDEDVWDPAFF 166

Query: 220 --------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVM 262
                      D +                                        IDY + 
Sbjct: 167 EGKTHTSQPERDAFDAFAEAGFADVVRPHAPGP-GVYTYWDYTQLRFPKRQGMRIDYVLG 225

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +            D  + +GK  SDH P+ +D 
Sbjct: 226 SPAFAARVTGAHI-------DRDERKGKGASDHAPVVVDL 258


>gi|296532245|ref|ZP_06894990.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC
           49957]
 gi|296267430|gb|EFH13310.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC
           49957]
          Length = 278

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/291 (10%), Positives = 78/291 (26%), Gaps = 52/291 (17%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +    +    + + S+N++     +              D   + +    +  D+V +Q
Sbjct: 25  AIAPEPASTAPITVASYNVHKCVGLDRRF-----------DPARIARVIAEMAPDLVAVQ 73

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E                        +      D +     A+ VR+     +Q+      
Sbjct: 74  EADRRFGRRVGLLDTGALGELGLSLVPVSRLPDGHGWHGNALLVRQGTPLSVQR------ 127

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              +   A  R AV + +E+   ++ V+  H                     ++Q   + 
Sbjct: 128 --LALPGAEPRGAVIVELELPAGRLRVVAAHFGLL-------------RRCRARQGAAIL 172

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + I       +P ++ GD N    +        + ++       F         +  +  
Sbjct: 173 EAIA--AGPAMPTLMMGDLN---EWRPGRRSSLRALE-----PFFGPGISFGPASFPSRL 222

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +D  +       +         +++        +  SDH P+     
Sbjct: 223 PVFALDRIL------GWPQGVVRDVQVHDT----PLARIASDHLPLKARLS 263


>gi|261400777|ref|ZP_05986902.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970]
 gi|269209377|gb|EEZ75832.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970]
          Length = 259

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           ++++S N+N +        +               +Y     ADIV +QE+ +  A   A
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +    ++       +S                            +G         
Sbjct: 47  DMKNPHGMHGYWHCAEKRGYSGVAVYGKRKPDNV--------------QIGMGIEEFDRE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V  +  ++ V+ ++L S    +  +        +  +        +   K  
Sbjct: 93  GRF-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246
               V+ GD+N     +   +      +                        +       
Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDNP 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++        +                + ++ SDH P
Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           + ++YD+
Sbjct: 250 LVVEYDY 256


>gi|30248098|ref|NP_840168.1| hypothetical protein NE0067 [Nitrosomonas europaea ATCC 19718]
 gi|30179983|emb|CAD83978.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
          Length = 274

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 87/282 (30%), Gaps = 48/282 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + + + ++NI+             S          LR     LD D+VFLQE+   +A+
Sbjct: 26  GRTLHIATYNIH----------KGLSFFNQRLILHELRDQLHGLDVDVVFLQEVVGEHAL 75

Query: 81  A----KVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + +P+NT   F +     +  + K       H   A+  +   V  +        
Sbjct: 76  HATRFRDWPRNTQYEFLADSMWPDFAYGKNAVYGHGHHGNAILSRFSIVNWE-----NED 130

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S  R  +R  +   + I G K  +  I +    F               SQQ + ++  
Sbjct: 131 ISAHRFESRGLLHCELAIPGWKDTLHCICVHLGLF-----------RRGRSQQLEAIEKR 179

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I Q      P V+AGDFN               ++  +    F         +  ++   
Sbjct: 180 IRQLVSPDAPLVVAGDFNDWRGAANP--LLASRLNLVE---VFQHTHGKAARSFPSVLPL 234

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           + +D   +            F               R+SDH 
Sbjct: 235 LRLDRIYIRG----------FQVKNAQILHN-RPWSRISDHA 265


>gi|292491294|ref|YP_003526733.1| endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4]
 gi|291579889|gb|ADE14346.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4]
          Length = 226

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 79/282 (28%), Gaps = 57/282 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
           +RLV++NI++    +                       ++L AD++ LQE+   +     
Sbjct: 1   MRLVTYNISSCRGTDRCFNP-----------ARTASVLRSLKADVLALQEVEHRSVNGQD 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     +                    +H   A+  +   +  + + L        R   
Sbjct: 50  LLDYLAYQTGLVAIPGP----IFLRRSLHYGNALLTRAKVLQIRRHDLSVL-----RREP 100

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+++ ++  G+KI V+  HL                      Q Q L +         
Sbjct: 101 RGAIDVDLKWRGQKIRVVVTHLGLRS-------------RERRFQIQQLLNL--GLTPDG 145

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              V+ GDFN    +        +              +     +         +D   +
Sbjct: 146 GRTVLMGDFNEWWPWSQTLRWLRREF-----------GRCLSPFSFPACYPIFALDRIWL 194

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          +L    +  S  +  SDH P+    ++
Sbjct: 195 ----------HGHRRLLTLGVEASSLARVASDHLPLKAVVEW 226


>gi|332800472|ref|YP_004461971.1| exodeoxyribonuclease III Xth [Tepidanaerobacter sp. Re1]
 gi|332698207|gb|AEE92664.1| exodeoxyribonuclease III Xth [Tepidanaerobacter sp. Re1]
          Length = 251

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N L    G                   +Y K++DADI  +QE        ++
Sbjct: 1   MKAVSWNVNGLRACLGKGF---------------LEYFKDVDADIFAIQETKLQEGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +       +   D+  R    
Sbjct: 46  -ELEGYEQYWN----------YAVKKGYSGTAVFTKISPLSVAYGIDIEEHDAEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  + +++++ +     +  +          +    L            
Sbjct: 91  -----VITLEFENFYFVNVYVPNSQRGLTRLDYRMKWEDDFREYLIKLDGI--------K 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                              +  +  +  F      + +A 
Sbjct: 138 PVICCGDKNVAHQEIDLKNPKSNRKNAGFTDEERQKMTELLNSGFIDAFRYLYPDKKDAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     +        +             SDHCP+ 
Sbjct: 198 TWWSYMFKAREKNVGWRIDYFIVSERLKDKIKDVEIHSHV-----------MGSDHCPVL 246

Query: 300 IDYD 303
           +D D
Sbjct: 247 LDID 250


>gi|158522569|ref|YP_001530439.1| exodeoxyribonuclease III [Desulfococcus oleovorans Hxd3]
 gi|158511395|gb|ABW68362.1| exodeoxyribonuclease III [Desulfococcus oleovorans Hxd3]
          Length = 262

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 86/309 (27%), Gaps = 74/309 (23%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSY 77
             +K++LVSWN+N L    G                   +  KNLDAD+V +QE  + + 
Sbjct: 2   AKRKIKLVSWNVNGLRAVMGKGF---------------LETFKNLDADVVGIQETKLQAP 46

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                +     +  +++           +    ++ +A   +      ++       D+ 
Sbjct: 47  QVTGDMANIEGYTSYWA---------HATTKKGYSGVAAFSRMPVKNAKTGMGREEYDNE 97

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R          VE++       +I+  +    +                A         
Sbjct: 98  GRI---------VELDLGDFIFFNIYFPNGQMGEDRLTYKLDFYRDFFAYADA------- 141

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDS 243
            ++     VI GD+N   N +   +                       D  +   +    
Sbjct: 142 YRKQGRSLVICGDYNTAHNEIDLKNPKANENTSGFMRIERDWLDKISADGYVDTFRHLYP 201

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           IDYF + ++              + +D         SD
Sbjct: 202 DTVKYSWWTYRFKARERNVGWRIDYFFVTEDIISK---------GWLKDAFIDNTVYGSD 252

Query: 295 HCPISIDYD 303
           HCP+ +  +
Sbjct: 253 HCPVGLVLE 261


>gi|28870665|ref|NP_793284.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213969036|ref|ZP_03397176.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato T1]
 gi|28853913|gb|AAO56979.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213926335|gb|EEB59890.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 237

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 41/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107
              LR+  +++ ADIVFLQE+    ++   +V    T   +     S      + +    
Sbjct: 16  LPELREAVRSVSADIVFLQEVHGEHHSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVY 75

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            D     A+  K   +  ++  +            R  +  ++++      V  + +   
Sbjct: 76  PDGDHGNALLSKYPIIQHENLDVSIDG-----TEQRGLLHCILQVPDHG-QVHAVCVHLG 129

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
            F            S   QQ + L   + +      P ++AGDFN               
Sbjct: 130 LF-----------ESHRRQQLKLLAQLMDR-LPEGAPVIVAGDFNDWRQRAD------AL 171

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +        F +   +   +       + +D   +           S             
Sbjct: 172 LQGTGLHEVFVQRFGAPAKSFPARWPLLRLDRIYVRNATSHRPKVLS-----------SR 220

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P++++  
Sbjct: 221 PWSHLSDHAPLAVEVT 236


>gi|84686936|ref|ZP_01014820.1| hypothetical protein 1099457000247_RB2654_04259 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84665133|gb|EAQ11613.1| hypothetical protein RB2654_04259 [Rhodobacterales bacterium
           HTCC2654]
          Length = 281

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 72/297 (24%), Gaps = 39/297 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++SWN+   +     S               +  Y      DI  + E+ S    ++
Sbjct: 6   DLKVLSWNVEHFTGAGTGSR--------RDRVARVAGYVAGEAPDIFAIMEVESGRVFSE 57

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +    +F  TE               TA   +K   +               +  G 
Sbjct: 58  FVNRMPGYVFAITEGPQTQETLIGIRHGITAFMTQKNEFKR--------------NNPGL 103

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    + V        +  +                 +    +   +   D +++     
Sbjct: 104 RPGALVTVTAPDGS-HLPILFNHLKSLPSPEGFGLRDAMFEKAFGLKRTLDGVSEGLGQE 162

Query: 203 VPFVIAGDFNR----------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           V F++AGD N            I          +       +        +  N + +  
Sbjct: 163 VRFILAGDLNTMGMTLKDSDQDITAAEEIARLDRRFRRYGMVRLPKTHDTTFNNGSTSSY 222

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEIL------YNEDDIKSRGKRLSDHCPISIDYD 303
               +D+    +        +     +        +        R SDH P+     
Sbjct: 223 APADLDHVFATETLTFVDQGQGAKVHVGGWAVEAEDASRDDWIARFSDHAPLMFTVT 279


>gi|326473513|gb|EGD97522.1| endonuclease/exonuclease/phosphatase [Trichophyton tonsurans CBS
           112818]
          Length = 292

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 77/294 (26%), Gaps = 24/294 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82
            R+++ NI   +             R       L  Y   L+ +  V LQE         
Sbjct: 8   FRILTHNIRYATTSPSAGEQP-WSVRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVTDV 65

Query: 83  VFPK---------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +            + W  +         +   S      A+   ++   V     P + +
Sbjct: 66  LAGLNSRPHAAETDQWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPSVPS 125

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           K  +  A  R     +       I VL ++       D    +   S  L+      ++ 
Sbjct: 126 K-GWDAASIRIVTIGVFNHKSSNITVLAMNTHL---DDQGSKSRFESAKLI---LSLIQK 178

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANK 249
           ++ +    +    +AGDFN   +     +         D+  + P       +       
Sbjct: 179 YLARY-PEVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFD 237

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY ++   +                 +        SDH  +  D  
Sbjct: 238 GKTKGSRIDYVMVGPQSCSSASIPFTVNGYAVMPNRFDNRIYNSDHRAVVADIT 291


>gi|309379305|emb|CBX22078.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 259

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           ++++S N+N +        +               +Y     ADIV +QE+ +  A   A
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +    ++       +S                            +G         
Sbjct: 47  DMKNPHGMHGYWHCAEKRGYSGVAVYGKRKPDNV--------------QIGMGIEEFDRE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V  +  ++ V+ ++L S    +  +        +  +        +   K  
Sbjct: 93  GRF-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246
               V+ GD+N     +   +      +                        +       
Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNP 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++        +                + ++ SDH P
Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           + ++YD+
Sbjct: 250 LVVEYDY 256


>gi|162455565|ref|YP_001617933.1| hypothetical protein sce7284 [Sorangium cellulosum 'So ce 56']
 gi|161166147|emb|CAN97452.1| hypothetical protein sce7284 [Sorangium cellulosum 'So ce 56']
          Length = 354

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 95/318 (29%), Gaps = 52/318 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN 78
           A  +R+VS+N+                  T++  T +      +    D+V LQE+ + +
Sbjct: 42  ATSLRIVSYNVRYFGHGTRGIA------STSAAITRIATTLARMSPLPDLVCLQEVETQS 95

Query: 79  ---------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---------TAI 114
                           + ++  +    +  +  R    +     +            T +
Sbjct: 96  LRSSTMNPRWHPEETQLDRLMTELHAALAQAQRRERYVAYYFPAHTYRLTSRTNIYTTGL 155

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSR-----AGNRRAVELLVEI-NGKKIWVLDIHLKSFC 168
           AV  ++   +           +  R        R    +  E  +G+   V + HL    
Sbjct: 156 AVLARDTFHIGHHNAERPHDITHRRGVKSLKQTRICAHVSFEHESGQSFDVFNTHLSLPS 215

Query: 169 FLDSLE---NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                               ++A+ L D++ +++ S   FV+ GDFN        +    
Sbjct: 216 VFSREFWTGEARMGFGPNQIEEARVLADFVRRERRSDN-FVVVGDFNSLPGS-PVDRFLR 273

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNE 282
           + I   D+  +     ++   A         ++ +D+        ++L         +  
Sbjct: 274 EEIGFVDAFAKVRCFSETEARAFPTAGFMNLRMHLDHV-YSSERLQWLDFTGTHPFGHKG 332

Query: 283 DDIKSRGKRLSDHCPISI 300
                    LSDH P+  
Sbjct: 333 AFA-----GLSDHVPLIA 345


>gi|15805383|ref|NP_294077.1| exodeoxyribonuclease III [Deinococcus radiodurans R1]
 gi|6458033|gb|AAF09936.1|AE001896_1 exodeoxyribonuclease III [Deinococcus radiodurans R1]
          Length = 283

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 82/308 (26%), Gaps = 83/308 (26%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              +++ ++N+N L                 +    L  + ++   D++ LQE+ +    
Sbjct: 32  TGPLKVTTFNVNGLRS---------------ALRKGLADWVESNQPDVLLLQEVRAEPMP 76

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +        ++S       +        ++ +A+  +      +    LG       A
Sbjct: 77  DAL------PGYHSAWFPAQKAG-------YSGVAILSRLPLKDVR----LGMPHDEMDA 119

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R    ++       +  + ++L S    ++ +                 + W+++   
Sbjct: 120 EGRVVSAVV-----AGVRFVSVYLPSGSSGEARQGFKDRV-------LADYQAWVSELLA 167

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA------------- 247
           +  P VI GD+N     +   +      +                               
Sbjct: 168 AGEPVVIGGDYNIAHREIDLKNWRSNQKNSGFLPHERTWMTAHLAAGLVDCHRDCLGEEA 227

Query: 248 -NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +                     D       RLSDH P
Sbjct: 228 EYTWWSNRANAYANNVGWRIDYLL----------SAGVRVSGVRSDRS----VRLSDHAP 273

Query: 298 I--SIDYD 303
           +   ++ +
Sbjct: 274 LTGWVELE 281


>gi|328954136|ref|YP_004371470.1| Endonuclease/exonuclease/phosphatase [Desulfobacca acetoxidans DSM
           11109]
 gi|328454460|gb|AEB10289.1| Endonuclease/exonuclease/phosphatase [Desulfobacca acetoxidans DSM
           11109]
          Length = 253

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 83/283 (29%), Gaps = 32/283 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++++N+   +  +G + WK           L+ +       D++  QE+     +  +
Sbjct: 1   MRIMTFNLRFQNPLDGPNQWKFRK-------ELVLETIWAYQPDLLAAQEVTIPQ-LDYL 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               T    +   R I+ + +       +   V            P +    S+  A  R
Sbjct: 53  AANLTGYEPFIKHRNIDLTCQYPTIFFRSQTIVAGAGNEFWLSETPEVHRSKSWESAFPR 112

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                      + +W                     S     + A  L+++  Q      
Sbjct: 113 MVTYGSFREVDRDLWFCFADTHL----------DHVSALARQKAATMLREFFLQL---NQ 159

Query: 204 PFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
           P ++AGDFN       +            +  ++   +E  S  +          ID+ +
Sbjct: 160 PAILAGDFNDHPQSSVHRVLARGDSPFRDSWEVLGHFEEGVSTQHKFDGEFFGGRIDWIL 219

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           + +          F              +  SDH P  ++ ++
Sbjct: 220 ITE---------PFRLKAAEIITYNQAKQYPSDHFPYYVEVNY 253


>gi|228949463|ref|ZP_04111717.1| hypothetical protein bthur0007_55730 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228810186|gb|EEM56553.1| hypothetical protein bthur0007_55730 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 342

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 96/338 (28%), Gaps = 56/338 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++R  ++N+    E        NS             +++   ++  D++  QE+ S NA
Sbjct: 2   QIRFGTFNLYQFVEPPYKWYEPNSFYSDADWLKKKEWIKKQILDMKCDVIGFQEVFSTNA 61

Query: 80  VAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD--- 135
           +  +  +  +  F +    + + ++         AIA +   + V     P    ++   
Sbjct: 62  LKNLVEEVGFTHFITVESPVTDINEPLVFIKPVVAIASKYPILSVSPVEIPDSIIEEVLL 121

Query: 136 SFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSF-------CFLDSLENTYS--------- 178
             +   +R  ++  + I+  + +     HLKS         F  S               
Sbjct: 122 GKTFKFSRIPIKAKIRIDSSRDVICYVSHLKSKKPAVKDIVFNPSETWDKQILENLRARS 181

Query: 179 ----PSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDF-------- 224
                S      +A  L   I++   +    P ++ GD N   + +              
Sbjct: 182 MGHVASLLQRGTEAAILYREISETLHNHKEFPIILLGDLNDDEHSIPIEALTNREKLLKI 241

Query: 225 ---------WKTIDPNDSLIRFP----KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                     K I        F     +    R   +   +    +D+  +     +   
Sbjct: 242 GDKIIPEEEQKIIYDYKLYDAFDLAPNQSGQKRLPTHYYGKLGNVLDFIFVSNALNEKNE 301

Query: 272 QESFSEILYNEDDIK-----SRGKRLSDHCPISIDYDF 304
           +       Y   D          K  SDH  +     F
Sbjct: 302 EYIGRVSEYKVFDRHLKCDDIENKTQSDHAQVVATIKF 339


>gi|172038845|ref|YP_001805346.1| hypothetical protein cce_3932 [Cyanothece sp. ATCC 51142]
 gi|171700299|gb|ACB53280.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 677

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 86/320 (26%), Gaps = 64/320 (20%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V    S   K+ + + N+  L   +   L             L+    K+   DI+ L E
Sbjct: 133 VTNLLSGEDKLTVAAMNVENLDPDDSDRLNPLGK--------LIVNNLKS--PDIIVLIE 182

Query: 74  MGSYNAVAKVFPKNTWCIF-----------------YSTERLINHSKRDSNNDIHTAIAV 116
           +   +        +    +                 +      +        +I      
Sbjct: 183 IQDNDGPNNSDITDGTETYNALIDAITTATGPDYIAFDIPPGDDKDGGQPGGNIRVGYLY 242

Query: 117 RKKNVRVLQQS------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
           +   V +   +                   P     D+ +   +R+ +    +     I+
Sbjct: 243 QPSRVALNPGTAGTATDTVTVLEGPTLSLNPGRIEPDNGAFQNSRKPIVAEFQFKQNPIF 302

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKIN 216
           ++  H  S    +              +QA  + +++     ++S    ++AGD N  I+
Sbjct: 303 IIGNHFVSQRGGNDD---------KRRKQATVVGNFVKALLSEDSKANVIVAGDLNDVID 353

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                      ++ +           S     +   N   +DY ++  N +     +   
Sbjct: 354 SEPI-----TILERSGLTNLSKLLPPSDRYTYEFNNNLQQLDYILVSDNLFTTGKSQFDI 408

Query: 277 EILYNEDDIKSRGKRLSDHC 296
                 +  +     LSDH 
Sbjct: 409 VH---VNVNQPSNLALSDHD 425


>gi|66043537|ref|YP_233378.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254244|gb|AAY35340.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 291

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 81/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      +    +     +          +   +       D D+V L
Sbjct: 30  PQDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN--DFDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271


>gi|85714027|ref|ZP_01045016.1| Endonuclease/exonuclease/phosphatase [Nitrobacter sp. Nb-311A]
 gi|85699153|gb|EAQ37021.1| Endonuclease/exonuclease/phosphatase [Nitrobacter sp. Nb-311A]
          Length = 226

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 72/282 (25%), Gaps = 60/282 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++WN++                    D   +    +    DIV LQE+ S      
Sbjct: 4   TIRVMTWNVHGTFNLNPRF-----------DIEAVASIIRRWSPDIVGLQEIDSRGR--- 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   +          ++     D      +  K   +   +   +     +     
Sbjct: 50  -NDNPFERLAGVVGAHNVDARSIVTADGDYGQVLLSKWRFIRAPTIVDVS----YREREA 104

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RRA+   ++    +I V+  HL               S     +QA+ + + I       
Sbjct: 105 RRAISACIQSPIGEIAVIATHLGL-------------SIRERHEQARAIVNLIDAP---- 147

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              V+ GDFN             +                +R     +    + +D    
Sbjct: 148 -RTVVLGDFNDWFWVKSVRRILAQ-----------RCPVRTRMRTFPSWCPVLRLDRIY- 194

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      +               +  SDH P+  D  F
Sbjct: 195 -----------TVQTGNIVRAWTDPEARGRSDHLPVIADVMF 225


>gi|326383425|ref|ZP_08205112.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395]
 gi|326197831|gb|EGD55018.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395]
          Length = 260

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/306 (10%), Positives = 66/306 (21%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  +      D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRARSEQVVAWMNRHAIDVLAMQETKCPDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      +     +         +  +A+  +           +G     +  G R
Sbjct: 41  ------QFPVMSFLAHGYDVAFHGTGGYNGVAIASRIGVHDVH----IGFDGQPTYDGER 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQKKES 201
            A  +        + V  +++ +          Y             L D   +    + 
Sbjct: 91  EARAISATCGD--VRVWSLYVPNGREPGHPHFQYKLD------WLSALGDVTSLELSHDP 142

Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               V+AGD+N                           ++       +            
Sbjct: 143 AAQVVLAGDWNVAPTDDDVWDPEYFESRTHTSEEERAAFRHFIEGGFVDSAAPYTTDP-K 201

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            + ID+ +                     D      +  SDH P
Sbjct: 202 TYTFWDYQAGRFARNEGMRIDFALCSPALDDR-------VYDAFIDRAARAAEGASDHAP 254

Query: 298 ISIDYD 303
           I  D  
Sbjct: 255 IVFDLS 260


>gi|115372687|ref|ZP_01459994.1| putative secreted protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370408|gb|EAU69336.1| putative secreted protein [Stigmatella aurantiaca DW4/3-1]
          Length = 394

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 71/276 (25%), Gaps = 54/276 (19%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++NI                         +         D+V LQE+      +    +
Sbjct: 1   MTYNIKHAELSS---------------LEAIASVINAQAPDVVALQEVDVLTVRSNRVDQ 45

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                  +           S +     +A+  +      Q  PL  A +          V
Sbjct: 46  AARLGQLTGLSHAFIPSLTSYDSGQYGLAILSRYPIRSAQRLPLRSAAEQR--------V 97

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
             L E+      ++ + +  F    +         +   QQA+ +K  +          +
Sbjct: 98  LALFEVELAPSRLIPVGVTHFGTTGA---------TERVQQAEDIKAALA----GKPWAL 144

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GD N   +    +    +  D         +        +        IDY ++    
Sbjct: 145 LGGDLNASPSESSISSLLQQFTDAWA------RGGSGSGYTHSATLPTKRIDYVLLGSA- 197

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +    + S +              SDH P++   
Sbjct: 198 --WTSPLTASVVNAPSQ---------SDHRPLAATL 222


>gi|108706371|gb|ABF94166.1| Endonuclease/Exonuclease/phosphatase family protein, expressed
           [Oryza sativa Japonica Group]
          Length = 605

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 86/344 (25%), Gaps = 63/344 (18%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77
               ++S+NI  +T +  +  S               L +      ADI+ LQE+ S   
Sbjct: 254 GTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQNLLREIIGYHADIICLQEVQSNHF 313

Query: 78  -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--LLGAK 134
               A    K+ +   +       ++    + D       R K   V +  +        
Sbjct: 314 EEFFAPELDKHGYQALFKKRTTEVYTGNLQSIDGCATFFRRDKFSHVKKYEFNKAAQSLT 373

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLD------------IHLKSFCFLDSLENTYSPSCS 182
           D+   A  R+     +  +   +  +                +  C  ++  N +     
Sbjct: 374 DAIIPAAQRKVALTRLIKDNIALIAVLEAKFGSHGADNPSKRQLLCVANTHINVHQDLKD 433

Query: 183 LLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNN-------------------- 221
           +   Q   L   + +    + +P ++ GDFN       +                     
Sbjct: 434 VKLWQVNTLLKGLEKIAVSADIPMLVCGDFNATPGSTPHGLLAMGKVDLMHPDLAIDPLG 493

Query: 222 ----------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                                        D      R     +     N        IDY
Sbjct: 494 ILRPASKLTHQLPLVSAYSSFARMVGAGYDLEHQRRRMDPATNEPLFTNCTRDFTGTIDY 553

Query: 260 FVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +      + E   E    +D      +  SDH  +  ++
Sbjct: 554 IFYTADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 597


>gi|326560422|gb|EGE10804.1| catabolite repression control protein [Moraxella catarrhalis 7169]
 gi|326565843|gb|EGE16005.1| catabolite repression control protein [Moraxella catarrhalis BC1]
 gi|326571181|gb|EGE21205.1| catabolite repression control protein [Moraxella catarrhalis BC7]
          Length = 336

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 87/310 (28%), Gaps = 69/310 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76
            +  Q +R+VS N+N L   E    +               ++    +AD+V +QE   +
Sbjct: 69  QTANQVLRVVSINVNGLRAAEKKGFF---------------EWLAVSNADVVCIQESRIT 113

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +      F    W       +   ++           +A+  +   V           DS
Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAGYA----------GVAIYSRLPFVSVVDGLGFDLADS 163

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R       +L  +     +++  ++L S    +        + +      +  +  + 
Sbjct: 164 QGR-FICAQFDLSAQGIDHPVYIASLYLPSGSSGE-------EAQARKDLFLEKYRHILK 215

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEK 241
           Q ++     ++ GD+N     +   +                +   I      +   +  
Sbjct: 216 QWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFRVV 275

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +      N+           IDY     +  K  +                +    
Sbjct: 276 RKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKRTLNAWV-----------YKDSWF 324

Query: 293 SDHCPISIDY 302
           SDH P+ IDY
Sbjct: 325 SDHAPVIIDY 334


>gi|68536120|ref|YP_250825.1| putative extracellular nuclease [Corynebacterium jeikeium K411]
 gi|68263719|emb|CAI37207.1| putative extracellular nuclease [Corynebacterium jeikeium K411]
          Length = 931

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/332 (12%), Positives = 92/332 (27%), Gaps = 63/332 (18%)

Query: 25  RLVSWNINTLSEQEGVSLWK----------------------NSVKRTTSDYTLLRQYAK 62
            + S+N+       G                            S +        + +   
Sbjct: 518 SIASFNVLNYFTDLGQDQGNCGSYKDREGNPVTANKCDVRGAYSEQAFKDQQEKIVKAIN 577

Query: 63  NLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            LD  ++ L+E+ +          A+  +  +               +   + + I TA 
Sbjct: 578 TLDVSVLGLEEIQNSAKFGKDRDAALKHLVDELNAAGGKWEYVKTPATVAKNEDVIRTAF 637

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING----KKIWVLDIHLKSFC-- 168
             +   V  + +S  L            R+ +    +  G    +    +  H KS    
Sbjct: 638 IYQPDKVEPVGESKILDVEAFDQIA---RQPLAQQFKNKGAKDEQAFVAVVNHYKSKGSV 694

Query: 169 -FLDSLENTYSPSCSLLSQQAQ-WLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFW 225
              D+       + + L  +    L  W+++  +    P  I GDFN             
Sbjct: 695 ARGDADTGDGQGNNAKLRAEMSSQLVKWLSEDADFKDKPQFILGDFNAYAKEDAI----- 749

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           + I+         K      ++ +       +D+ + +Q A +        +I  +E   
Sbjct: 750 RIIEEAGYTNLETKFDAG--HSYQFGGRVGSLDHVLANQKAAEMATGADVWDINADESVA 807

Query: 286 KSRGK--------------RLSDHCPISIDYD 303
               +              R SDH PI + ++
Sbjct: 808 FEYSRRNYNVVDFYEPNVFRASDHDPIKVGFN 839


>gi|325281386|ref|YP_004253928.1| exodeoxyribonuclease III Xth [Odoribacter splanchnicus DSM 20712]
 gi|324313195|gb|ADY33748.1| exodeoxyribonuclease III Xth [Odoribacter splanchnicus DSM 20712]
          Length = 257

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/305 (9%), Positives = 80/305 (26%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N+N L                         +      DIV LQE          
Sbjct: 2   IKIITYNVNGLRSALSKGF---------------TDWLAEELPDIVCLQETKAQPDQIPT 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    +  F+ +     +          + +A+  +        +   G         
Sbjct: 47  LEFEALGYRSFFFSAEKKGY----------SGVAILTRITP----DHLEYGMGMQEYDRE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + ++ ++  S    +  +       +   +  +  + ++ +  ++
Sbjct: 93  GRF-----LRADYGDLSIVSVYHPSGTTGEERQ-------AFKMKWLEDFRHYVMKLSKT 140

Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N                   +L    ++      +     F        +
Sbjct: 141 RKKLILCGDYNICHRPIDIHDPVRNANSSGFLPEEREWMSLFLESGFTDTFRYFHPEEPH 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY ++               I   +D       + SDHCP
Sbjct: 201 QYTWWSFRANARNNNKGWRIDYCMVSPE-----------VIPLLKDAYILPQVKHSDHCP 249

Query: 298 ISIDY 302
             ++ 
Sbjct: 250 AVVEL 254


>gi|326318978|ref|YP_004236650.1| endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375814|gb|ADX48083.1| Endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 256

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 83/291 (28%), Gaps = 49/291 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +      ++++ N++                        LR+  + + ADIVFLQE+   
Sbjct: 7   SPSPVAFKVLTVNVHKGFTSFNRRFM----------LHELREAVRGVAADIVFLQEVLGT 56

Query: 78  NAVAKV----FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +         FP+     F +      ++       +  H   A+  K   V  +++ + 
Sbjct: 57  HQRHASRVANFPQEPHYEFLADTIWGQYAYGRNAVYDSGHHGNALLSKFPIVHYENHDIS 116

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +         R  +  +++  G    V  I +                 +   +Q + +
Sbjct: 117 VSG-----PERRGMLHCVLQPPGHDRQVHAICVHLGL-----------QEAHRQRQLRRV 160

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            D +     +  P ++AGDFN                        F              
Sbjct: 161 CDLVNTF-PADDPVIVAGDFNDWRGRAHE-----VLRKGAGLHEVFVHAGGRAVRTFPAS 214

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + +D   +   +           +       +    +LSDH P++ + 
Sbjct: 215 MPLLALDRIYVRNAS-----------VHAPVVLPRKPWHKLSDHAPLAAEI 254


>gi|149200232|ref|ZP_01877254.1| exodeoxyribonuclease (ExoA) [Lentisphaera araneosa HTCC2155]
 gi|149136674|gb|EDM25105.1| exodeoxyribonuclease (ExoA) [Lentisphaera araneosa HTCC2155]
          Length = 258

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 88/308 (28%), Gaps = 82/308 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
            V+L+SWN+N +   E                       ++ DAD++ LQE         
Sbjct: 2   SVKLISWNVNGIRAVEKKGF---------------VDLMQSWDADVICLQETKAHKEQLS 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++     +  ++ +     +S           +A+  +   +       +   D   R 
Sbjct: 47  DELINIGNYTSYWHSGEKKGYSS----------VAIYSRIEPIRVIEGLGIEEFDREGR- 95

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   ++       ++  ++  +        +        L +Q +         K 
Sbjct: 96  --------VIIAEYSDFYLFGVYFPNAQAELKRIDYRLEFGDALIEQLKE--------KY 139

Query: 201 SLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244
           S    V+ GDFN     +                   +   K +      +   +  +  
Sbjct: 140 SDKACVLCGDFNVAHKAIDLKNPKANEKNPGYSIQERNWMDKFL--AAGHVDTFRMFNQN 197

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +       +           IDYF + ++A   ++     + +             SDH
Sbjct: 198 PDEYSWWSYRGGARSRNVGWRIDYFCVSESARDRVLDAGIMQEVL-----------GSDH 246

Query: 296 CPISIDYD 303
           CP+SI+ +
Sbjct: 247 CPVSIELE 254


>gi|326561625|gb|EGE11962.1| catabolite repression control protein [Moraxella catarrhalis
           103P14B1]
 gi|326562589|gb|EGE12900.1| catabolite repression control protein [Moraxella catarrhalis
           46P47B1]
 gi|326564034|gb|EGE14278.1| catabolite repression control protein [Moraxella catarrhalis
           12P80B1]
 gi|326570498|gb|EGE20538.1| catabolite repression control protein [Moraxella catarrhalis BC8]
 gi|326575630|gb|EGE25553.1| catabolite repression control protein [Moraxella catarrhalis CO72]
          Length = 336

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 87/310 (28%), Gaps = 69/310 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76
            +  Q +R+VS N+N L   E    +               ++    +AD+V +QE   +
Sbjct: 69  QTANQVLRVVSINVNGLRAAEKKGFF---------------EWLAVSNADVVCIQESRIT 113

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +      F    W       +   ++           +A+  +   V           DS
Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAGYA----------GVAIYSRLPFVSVVDGLGFDLADS 163

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R       +L  +     +++  ++L S    +        + +      +  +  + 
Sbjct: 164 QGR-FICAQFDLSAQGIDHPVYIASLYLPSGSSGE-------EAQARKDLFLEKYRHILK 215

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEK 241
           Q ++     ++ GD+N     +   +                +   I      +   +  
Sbjct: 216 QWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFRVV 275

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +      N+           IDY     +  K  +                +    
Sbjct: 276 RKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKRTLNAWV-----------YKDSWF 324

Query: 293 SDHCPISIDY 302
           SDH P+ IDY
Sbjct: 325 SDHAPVIIDY 334


>gi|312132556|ref|YP_003999895.1| xtha [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773493|gb|ADQ02981.1| XthA [Bifidobacterium longum subsp. longum BBMN68]
          Length = 286

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 78/311 (25%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81
            + + + N+N +                 +    +  +A     D+  +QE+ +    V 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCMQEVRAPQEDVD 46

Query: 82  KVFPKNTWCIFYSTERLINHS----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +    + +                     + +        ++       +D  
Sbjct: 47  SIFGEFGFEYATAGKIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPSLGEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  I V  +++ +    DS +         L      + +   +
Sbjct: 107 S---GRWIETDVKTPQGYTITVACVYVHAGNTDDSTKMEQK--YRFLDTMLTRMGELRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +D  + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +       +   +  D   +   R 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYELRW 274

Query: 293 SDHCPISIDYD 303
           SDH P++I YD
Sbjct: 275 SDHAPLTITYD 285


>gi|302543032|ref|ZP_07295374.1| exodeoxyribonuclease III [Streptomyces hygroscopicus ATCC 53653]
 gi|302460650|gb|EFL23743.1| exodeoxyribonuclease III [Streptomyces himastatinicus ATCC 53653]
          Length = 273

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 75/306 (24%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + + N+N L                         +     AD+V LQE+         
Sbjct: 8   LSVTTVNVNGLRAAAKKGFVP---------------WLDGTAADVVCLQEVRAEPRELPE 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V   + W + ++           +       ++V  +      +        D   R  
Sbjct: 53  AVREPDGWHVVHAP----------AAAKGRAGVSVYARRELEAVRVGFGSSEFDDSGR-- 100

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 + V++ G  + V  ++L S       ++      +      + L++        
Sbjct: 101 -----YVEVDLPG--VTVGSLYLPSGEVGTERQDEKERFTAEFLPYLKELRERA---AAD 150

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                             +  +    +           
Sbjct: 151 GREALVCGDWNIAHQEADLKNWKANRKKSGFLPEERAWLSRVFEEAAYVDVVRALHPDVD 210

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY V                +    +   +  +R SDH 
Sbjct: 211 GPYSWWSYRGRAFDNDAGWRIDYQVATPGLAGRA-------LKAVVERAPAYDQRWSDHA 263

Query: 297 PISIDY 302
           P+++ Y
Sbjct: 264 PVTVTY 269


>gi|296113045|ref|YP_003626983.1| catabolite repression control protein [Moraxella catarrhalis RH4]
 gi|295920739|gb|ADG61090.1| catabolite repression control protein [Moraxella catarrhalis RH4]
          Length = 336

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 87/310 (28%), Gaps = 69/310 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76
            +  Q +R+VS N+N L   E    +               ++    DAD+V +QE   +
Sbjct: 69  QTANQVLRVVSINVNGLRAAEKKGFF---------------EWLAISDADVVCIQESRIT 113

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +      F    W       +   ++           +A+  +   V           DS
Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAGYA----------GVAIYSRLPFVSVVDGLGFDLADS 163

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R       +L  +     +++  ++L S    +        + +      +  +  + 
Sbjct: 164 QGR-FICAQFDLSAQGIDHPVYIASLYLPSGSSGE-------EAQARKDLFLEKYRHILK 215

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEK 241
           Q ++     ++ GD+N     +   +                +   I      +   +  
Sbjct: 216 QWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFRVV 275

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +      N+           IDY     +  K  +                +    
Sbjct: 276 RKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKRTLNAWV-----------YKDSWF 324

Query: 293 SDHCPISIDY 302
           SDH P+ IDY
Sbjct: 325 SDHAPVIIDY 334


>gi|94496587|ref|ZP_01303163.1| exonuclease III [Sphingomonas sp. SKA58]
 gi|94423947|gb|EAT08972.1| exonuclease III [Sphingomonas sp. SKA58]
          Length = 265

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 86/311 (27%), Gaps = 74/311 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           AQ + + SWNIN                   +   ++ Q  +    DI+ LQE      V
Sbjct: 2   AQTLSICSWNIN----------------SVRARIDIVEQLLREETPDILCLQE---TKVV 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + FP   +       +++N         +H  +A+  K               ++    
Sbjct: 43  NETFPTEMFRRLGYVHQVLN------GQRMHHGVAILSKVPIHEDDRLDWQANGEARH-- 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V + ++     + + ++++ +   +                   +L+  I     
Sbjct: 95  -----VGVRLDNG---VRIENVYVPAGGDVPDRTVNPKFGQK-----LDFLQRMIEWSAA 141

Query: 201 -SLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
               P ++ GDFN                   +     +   +    ND +        +
Sbjct: 142 LEDKPTILTGDFNIAPLECDVWSHRQLLDVVSHTPIECEILGRLQASNDWVDIGRHFHPA 201

Query: 244 RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                     +            +D+  M ++  +  +            +      + S
Sbjct: 202 PARLYTWWSYRAKDWAASDRGRRLDHMWMTRDVAEKAVGH-------RVIEPARSWIKPS 254

Query: 294 DHCPISIDYDF 304
           DH PI  D+ F
Sbjct: 255 DHIPIITDFAF 265


>gi|83643892|ref|YP_432327.1| metal-dependent hydrolase [Hahella chejuensis KCTC 2396]
 gi|83631935|gb|ABC27902.1| Metal-dependent hydrolase [Hahella chejuensis KCTC 2396]
          Length = 265

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 74/288 (25%), Gaps = 60/288 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGS 76
           +RL+S+NI           +     +          +   +         D+V LQE   
Sbjct: 13  IRLLSFNIQVGISTAAYRHYVTRSWQHVLPSQSRNKNLDRIAALLSQY--DVVALQECDG 70

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGA 133
            +  +    +  +    S           +   I      +  R +   V Q   P +  
Sbjct: 71  GSIRSGFVNQVEYLAEKSGHPYWFQQLNRNLGRIAQHSNGLLSRYRPNSVTQHKLPGVIP 130

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    R A+          + V+ +HL                     QQ + +  
Sbjct: 131 G--------RGAIIATYGDPTNPLVVVMLHLSLG-------------EKAQCQQLEHVCK 169

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            I          V+ GD N             + +               R N   + R 
Sbjct: 170 LIEGY----EHVVLMGDLNNHAE---------QLLSSTALGRTTLVSLPERVNTFPSWRP 216

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +  +D+ ++           +   + +            SDH P+++D
Sbjct: 217 ERSLDHIMVSPGLQIR----NAGVVCFPV----------SDHLPVAVD 250


>gi|328467999|gb|EGF39023.1| exodeoxyribonuclease A [Lactobacillus helveticus MTCC 5463]
          Length = 275

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 80/303 (26%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++L+     +  +    R       +      L+ DI+ +QE            
Sbjct: 3   LISWNIDSLNAALTGTSARAEETRG------VLDKIHALNPDIIAIQETKLRATGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +      +     +  S  +     +       K       S P +GA +     G    
Sbjct: 57  QTILAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELKPAVSKPAIGAPEPMDEEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +   K +V  ++  +                   +  + L +          P 
Sbjct: 114 ---IITLEFDKYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNE--------KKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +        F K   +       
Sbjct: 163 LASGDYNCAHTEIDLKHPENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++       +++    +                DHCPI +
Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHCPILL 271

Query: 301 DYD 303
           + +
Sbjct: 272 EIN 274


>gi|301788284|ref|XP_002929556.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
           [Ailuropoda melanoleuca]
 gi|301788286|ref|XP_002929557.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
           [Ailuropoda melanoleuca]
 gi|301788288|ref|XP_002929558.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 3
           [Ailuropoda melanoleuca]
 gi|281345899|gb|EFB21483.1| hypothetical protein PANDA_019762 [Ailuropoda melanoleuca]
          Length = 318

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELSGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|182701737|ref|ZP_02615102.2| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum NCTC 2916]
 gi|182668752|gb|EDT80730.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum NCTC 2916]
          Length = 360

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 105/321 (32%), Gaps = 64/321 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               +V++NI               G     +S ++T  +   +  + K  ++  +FLQE
Sbjct: 61  DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQE 120

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------- 123
           + + +   + F  + +    ++ +  + S   +       + + K +  V          
Sbjct: 121 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 178

Query: 124 -----LQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177
                 +  YP   +        +R  +E  + + NG+++ +++ HL ++          
Sbjct: 179 KINSATRYQYPGKESWPRQLAELDRCFLESRISLENGRELVLINSHLSAYDKGG------ 232

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTI 228
                +  QQ  +LK++I ++ +     ++ GD+N  I               D   K  
Sbjct: 233 ----KIRKQQLSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIP 288

Query: 229 DP--NDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYN 281
           +    +       +       +             ID F++  N    +       + + 
Sbjct: 289 NDFKPEGFKWVADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNI--EVTSVKAHSMEFK 346

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                       DH P+++++
Sbjct: 347 NT----------DHNPVNMEF 357


>gi|91214649|ref|ZP_01251622.1| hypothetical protein P700755_17329 [Psychroflexus torquis ATCC
           700755]
 gi|91187076|gb|EAS73446.1| hypothetical protein P700755_17329 [Psychroflexus torquis ATCC
           700755]
          Length = 343

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 86/308 (27%), Gaps = 56/308 (18%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
            Y   ++ F    +  +   ++++S+N+   +    +   +            +  + K 
Sbjct: 81  SYFSKIIVFNDNSSVEIKNSLKVMSYNVRLFNLYNWIEKTEVG--------EKISDFIKV 132

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
              DIV  Q+    N +      +++   +   +  +          +  IA+  K   +
Sbjct: 133 ETPDIVAFQDYYKANDLD----MSSYPYVFEKYKSKSS---------NVGIAIFSKYKII 179

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            + S       ++        A+   + +    + V  +HL+S   +  +          
Sbjct: 180 HRGSVDFPNTHNN--------AIYADIVVKKDTLRVYAVHLESLKIIPDVLELRKEDRQQ 231

Query: 184 LSQ--------QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
           L          Q +           + +P ++  D N        +      +       
Sbjct: 232 LINRVGKSFVKQQEQAILLSKSFSSTSLPKIVCMDMNNTAFSYVASQLLKHNLKD----- 286

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            F +                 ID                 +E      + K+   +LSDH
Sbjct: 287 AFVESGYGLGKTFDFDFLPFRIDVIF--------------NEKSLKNANFKNYSLKLSDH 332

Query: 296 CPISIDYD 303
            PI   ++
Sbjct: 333 YPIMASFN 340


>gi|324499909|gb|ADY39972.1| CCR4-NOT transcription complex subunit 6-like protein [Ascaris
           suum]
          Length = 610

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 95/348 (27%), Gaps = 71/348 (20%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  +     S   +           + +  ++ +ADI+ LQE+ +    
Sbjct: 236 TFTVLCYNVLCDKYASSNLYSYCPSWALNWEYRKAAILKEIRHYEADIITLQEVETEQFR 295

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLL------- 131
           +   P+     +       + +K  +  D       A+  K  +       L+       
Sbjct: 296 SLFLPELEAIGYAGIFSPKSRAKTMNEEDRKYVDGCAIFWKYDKFEMDREHLIEFTQIAI 355

Query: 132 ----GAKDSFSRAGNR--RAVELLVEIN------------------GKKIWVLDIHLKSF 167
                ++   +R   R   A+  ++ I                   G  + V   H+   
Sbjct: 356 KKAQTSEHMLNRVMPRDNIALCAVLRIKENVYSSRRMAMSPSDNVVGNPLVVCTAHIHW- 414

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINY------- 217
                  +     C +L Q+   L + I++K        P +I GD N            
Sbjct: 415 --DPEFCDVKLIQCMMLVQEIGNLLEEISEKYRITPQQTPVLICGDLNSLPESGVFEFLS 472

Query: 218 ------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPI 257
                          +D     +   D    +                  N  L  K  I
Sbjct: 473 KGAIAKDHPDLKGFRDDPCLTRLSATDDPKVYTHALRLDSAVDVNALPFTNYTLEFKGVI 532

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDD---IKSRGKRLSDHCPISIDY 302
           DY      +   L      ++ + + +           SDH PI   Y
Sbjct: 533 DYIFSTPQSLARLGVLGPLDMTWVQANKIIGFPHPHIPSDHVPIMAQY 580


>gi|291239603|ref|XP_002739715.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 563

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 78/309 (25%), Gaps = 61/309 (19%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
            S+NI   +        +++ K        L +     D+DIV  QE+     + K    
Sbjct: 278 ASYNIWNFNS-----FVEDNHKEYERRILHLGEIVSQSDSDIVSFQEV--RFDLEKSGEL 330

Query: 87  NTWCIFYSTERLINHSKRD---------SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + + + +  L N+                     +A+  K          L       
Sbjct: 331 GPFQVQHLSLALPNYQFIYQPAMTFMDNIFGRTEEGLAIFSKFPIKSHDFILLSRNASDP 390

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +    R  +   +E      I V + HL                        + + +   
Sbjct: 391 NDFHQRICIHAEIEFPVFGMIHVFNTHLSLSEDARD----------------RTVVEIWE 434

Query: 197 QKKESLVPFVIAGDFNRKINYLGNN----DDFWKTIDPNDSLIRFPKEKDSR-------- 244
             ++   P ++ GD N + +               +        +  +            
Sbjct: 435 FMQKFTGPALLMGDLNAEPHEKSIKFLTGQAEINGVQTKGLYDAWTLQHKEPRSAKLGLY 494

Query: 245 ----------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                       +    +    IDY  +     K +   + S +    DD K +    SD
Sbjct: 495 RANEKRDHGLTWSTIKPQLVSRIDYIFVR--LPKDIQLHNISLL----DDGKRKHFAASD 548

Query: 295 HCPISIDYD 303
           H  +     
Sbjct: 549 HLGLLATVS 557


>gi|225022084|ref|ZP_03711276.1| hypothetical protein CORMATOL_02117 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945017|gb|EEG26226.1| hypothetical protein CORMATOL_02117 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 298

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 81/306 (26%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +      LD D++ +QE        K 
Sbjct: 1   MRIANWNVN----------------SVRTRVDRIVAALARLDIDVLLVQETKCK---DKQ 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP + +           +       +    +A+  +      Q+        +      +
Sbjct: 42  FPFDAF---------PGYEIAHHGLNQWNGVAILSRVGLADIQTSFPHQPGFAKDPRKPQ 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---- 199
                 +  +   + V  +++ +   +      Y        +    L   +  +     
Sbjct: 93  NLEARAISADCGGVRVWSLYVPNGRAIADRHYDYK------LRWLDALARHVEDQAGDPE 146

Query: 200 -ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK-----------DSRCNA 247
             S  P V+ GDFN         D        +  +    ++             S  + 
Sbjct: 147 QPSSQPLVLGGDFNIAPTDANVWD--ITEFIDHTHVTEAERQAFAGLIEAGLTVTSPTSG 204

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 K         + ID+ +                     D  +  G   SDH P+
Sbjct: 205 YSYWDYKAGRFPKNEGMLIDFQLARG----------LHATGSFIDVAERSGTGASDHAPV 254

Query: 299 SIDYDF 304
            +DYD+
Sbjct: 255 VVDYDY 260


>gi|109037932|ref|XP_001097104.1| PREDICTED: deoxyribonuclease gamma isoform 1 [Macaca mulatta]
          Length = 305

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 91/290 (31%), Gaps = 32/290 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
            A  +R+ S+N+ +  E         S +   +   ++ +  K    DI+ L E+   N 
Sbjct: 17  SALALRICSFNVRSFGE---------SKQEDQNAMDVIVKVIKRC--DIMLLMEIKDSNN 65

Query: 79  ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + +    N+         + +   R++  + + A   ++K V V ++SY     +
Sbjct: 66  RICPVLMEKLNGNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQ 123

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D      +R    +  +     +    I         S+         L+         W
Sbjct: 124 DGDVDVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSV----KEIDELVDVYMDVKHRW 179

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                     F+  GDFN   +Y+         +  +   +    +++            
Sbjct: 180 ------KAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKRSTKCAY 233

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             I   +  Q     ++ +S S   + +    +  + L  SDH P+    
Sbjct: 234 DRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281


>gi|261380655|ref|ZP_05985228.1| exodeoxyribonuclease III [Neisseria subflava NJ9703]
 gi|284796637|gb|EFC51984.1| exodeoxyribonuclease III [Neisseria subflava NJ9703]
          Length = 259

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +    ++       +S     +                      +G         
Sbjct: 47  DMKNPHGMHGYWHCAEKRGYSGVAVYSKRKPDNV--------------QIGMGVEEFDRE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V  +  K+ V+ ++L S    +  +        +  +        +   K  
Sbjct: 93  GRF-----VRCDFGKLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246
               V+ GD+N     +   +      +                        +       
Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVP 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++        +                + ++ SDH P
Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           + ++YD+
Sbjct: 250 LVVEYDY 256


>gi|325129291|gb|EGC52129.1| exodeoxyribonuclease III [Neisseria meningitidis OX99.30304]
 gi|325135311|gb|EGC57932.1| exodeoxyribonuclease III [Neisseria meningitidis M0579]
 gi|325201282|gb|ADY96736.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240149]
          Length = 259

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEA-DLS 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +                 ++ +AV  K           +G          R
Sbjct: 46  ADMKNPHGMHGYWHCA-------EKRGYSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|312067871|ref|XP_003136947.1| exodeoxyribonuclease III family protein [Loa loa]
 gi|307767891|gb|EFO27125.1| exodeoxyribonuclease III family protein [Loa loa]
          Length = 306

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 83/309 (26%), Gaps = 75/309 (24%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             ++++++SWN+  L                  D   +       + DIV LQE      
Sbjct: 47  SGREIKIISWNVAGLRA------------WIKKDGHSI---LVKENPDIVALQETKCVEV 91

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             ++  +N +  F +T     H            + + K+    +  ++           
Sbjct: 92  PNEL--QNGYYSFLNTSEKSGHGGV---------LLLTKEEPIKVTYTFDDKSKSGLDGN 140

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  +        +  ++++ ++ +        +             + L        
Sbjct: 141 GKGRIIIA-----EYENYYLINAYVPNSGRGLVNLDKRKFWDDCYFSFIKKL-------- 187

Query: 200 ESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +   P V  GD N                          + +  +     +  F +    
Sbjct: 188 DLNKPIVYVGDLNVAHQEIDLANPKTNYNKTAGFTDQERNDFTRLLDAGFVDVFRRLNPE 247

Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +        N            +DYFV+ +     + +      +           + SD
Sbjct: 248 KEGVYTFWSNMRNAREKNVGWRLDYFVVSERIMNKVKECDILCSV-----------KGSD 296

Query: 295 HCPISIDYD 303
           HCP+S+  +
Sbjct: 297 HCPLSLTIE 305


>gi|257054579|ref|YP_003132411.1| exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017]
 gi|256584451|gb|ACU95584.1| exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017]
          Length = 265

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 72/307 (23%), Gaps = 71/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           + + + N+N L                        ++ +   AD+V  QE+ +   V   
Sbjct: 2   LTVSTVNVNGLRAAAKKGF---------------SEWFEATSADVVACQEVRADPGVLPD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     W   ++                   + +  +      +        +   R  
Sbjct: 47  ALREPPGWHTVHAACA----------TKGRNGVCLYSRIEPESVRVGFGEAEFEDSGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 + + +   ++ V  ++L S       +                L+D   +    
Sbjct: 95  -----YVEMWLP--RVVVGSLYLPSGEVGTPRQEEKERFMDTFLPYLATLRD---KASSE 144

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                             +  D    +           
Sbjct: 145 GKEVLVVGDWNIAHAEVDLKNWKANRKNSGFLPEERAWLSRVFDELGYVDVQRHLDPEGP 204

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY +      +              +  +S  KR SDH 
Sbjct: 205 GPYTWWSYRGRAFDNDAGWRIDYQIATPGLAQRCTS-------MVVERAESYDKRWSDHA 257

Query: 297 PISIDYD 303
           P++  Y+
Sbjct: 258 PVTATYE 264


>gi|218887544|ref|YP_002436865.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758498|gb|ACL09397.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 259

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 76/304 (25%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L SWN+N +    G   W                +    D  IV LQE        K 
Sbjct: 3   LKLYSWNVNGIRALSGKPEW---------------NWFAGCDGHIVGLQE-------TKA 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+         E              ++ +AV  +   +       L   D   +   R
Sbjct: 41  EPEQVPAAHRDPEGWKAWWLASRVKKGYSGVAVFSRVEPLAVH----LDMPDPAWQGEGR 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +        +I+  +    +   N            A+ L+           
Sbjct: 97  C-----IHLEFPAFHYFNIYFPNGGQGEERLNYKLGFYDAFLNHAEDLRRH--------K 143

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GDFN                   +L     +         +  F   +    +A 
Sbjct: 144 PIVVCGDFNTAHRPIDLARPKDNEDISGFLPIERAWMDRFTAAGYVDTFRLVQGDTPHAY 203

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                K           IDYF + +     +                      SDHCP+ 
Sbjct: 204 SWWSYKTRARERNVGWRIDYFFVSEELRGAVRDAWI-----------DMHVMGSDHCPVG 252

Query: 300 IDYD 303
           +  D
Sbjct: 253 LALD 256


>gi|224539371|ref|ZP_03679910.1| hypothetical protein BACCELL_04276 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519006|gb|EEF88111.1| hypothetical protein BACCELL_04276 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 370

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 93/328 (28%), Gaps = 77/328 (23%)

Query: 5   YVLALVFFLVP--------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           Y+LA+  F            +      +++ ++N+                + T      
Sbjct: 84  YILAIFQFSFTKKIPEGHYSSNYADGYLKIATYNVGNFGG-----------EITGYSCKE 132

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           + +Y K  + D++  QE G        FP ++    +S  R       DS         +
Sbjct: 133 IARYMKEQEVDVLCFQECGDNKY----FPMDSIRNVFSYWRYALIPTEDS---------I 179

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           R      +   YPL+  +    +     +++  + +    + +L+ HL++     +    
Sbjct: 180 RGVLPIAVFSRYPLVNPQFISYQQSANCSMQCDIVLGRDTVRLLNNHLQTTSVSQNRRKW 239

Query: 177 YS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
                                     +    ++Q   ++  +     S  P +  GDFN 
Sbjct: 240 ERGLANSNDTRREAEVVQGAITSLHNNFVKRAEQTDSIRQLV---VASPYPVLACGDFNS 296

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
             +      +    +        F           +  +  + IDY         +    
Sbjct: 297 LPSSYT-YAELSDVLKDG-----FRTSGRGYMYTYRYFKRLLRIDYIFHSPGIQGYRYYS 350

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISID 301
              ++              SDH P+ ++
Sbjct: 351 PDLDLC-------------SDHNPVLME 365


>gi|144900918|emb|CAM77782.1| predicted metal-dependent hydrolase (COG3568) [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 237

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 71/258 (27%), Gaps = 37/258 (14%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-----AKVFPKNTWCIFYSTERLINHSKR 104
             +    + +    L  D+V LQE+    A+       +  +    +     R    +  
Sbjct: 10  YGARLAAMTEALAELRPDVVLLQEVLDAPALGLHTGNTIAARLGCHVANLALREKPRNIE 69

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
               D  + +AV  +       S PL    D     G R A+ + ++     + V ++HL
Sbjct: 70  GIRADSRSGLAVLSRFPIRSTLSIPLPDHADD----GERAALVVEIDAPAGPLTVTNLHL 125

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
                 D           L  +Q         Q  +     +I GDFN  I     N   
Sbjct: 126 THLAQND-----------LRQRQLAA----AQQVTKRPGTALIGGDFNAPIESFALNATG 170

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
           W+                              ID+ +               + L     
Sbjct: 171 WRDCRSELGQPPQSTLTGQPDGP--------CIDHLLWAGRGRPPKTWRVDLDRLTR--- 219

Query: 285 IKSRGKRLSDHCPISIDY 302
                  +SDHC + +D 
Sbjct: 220 --DGQPAISDHCAVVVDL 235


>gi|196013219|ref|XP_002116471.1| hypothetical protein TRIADDRAFT_30983 [Trichoplax adhaerens]
 gi|190581062|gb|EDV21141.1| hypothetical protein TRIADDRAFT_30983 [Trichoplax adhaerens]
          Length = 284

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 74/273 (27%), Gaps = 37/273 (13%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                  +  L +  +  D DI+ LQE+           KN   +  + + +  HS    
Sbjct: 5   SPHRDERFKYLAEALRQSDYDIIGLQEVW--------LIKNYEALKVALKAVFPHSHYFY 56

Query: 107 NNDIHTAIAVRKKNVRVLQQSYP-----LLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           +  I +   +  +   V              A +     G +      +++NG  + V  
Sbjct: 57  SGKIGSGKCIFSRFPIVATSFTAYTLSGYPYALNHGDWLGKKGVGFCKIDVNGTILNVYV 116

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            H+ +                    +   L   I        P ++ GD N +   +G  
Sbjct: 117 THIHA-----EYNRDNDVYLPHRVTEIVQLSQLIRFTAG-NSPVILIGDLNFEPEDIGYR 170

Query: 222 ------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK------IPIDYFVMDQNAYKF 269
                 D     ++  D ++ + +      ++               IDY +   +  K 
Sbjct: 171 FITTSLDLKDAWLEAGDGVMLYTRNNIDYSDSLNTNSFTPANEIEKRIDYILYSGDHLKS 230

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                          I       SDH  +   +
Sbjct: 231 ------QACQVTLGRIPDAAFNYSDHEGVEATF 257


>gi|241762981|ref|ZP_04761043.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
 gi|241367933|gb|EER62152.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
          Length = 431

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 93/327 (28%), Gaps = 75/327 (22%)

Query: 46  SVKRTTSDYTLLRQYAKN-LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
           +          L Q     +  D++  QE+    A  +            +         
Sbjct: 112 TPSAYAKRGQQLSQVLARDVQPDVIAFQEVSGTKAAVEALGAAAGDYNVCSFDGK----- 166

Query: 105 DSNNDIHTAIAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
                   A A RKK    ++  +    +   ++ ++   R A  + + +NGKK+  L +
Sbjct: 167 --YKVQRLAFAWRKKFGEAVEACRDIHEVSLPEAPAKDQVRPAYTVTLNLNGKKVRFLTV 224

Query: 163 HLKSFCFLDSLENTYS------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK-- 214
           HLKS C      N          +C+LL QQ + L+       + +  FV+ GDFNR   
Sbjct: 225 HLKSSCVSPLDRNPRRLDDASIEACALLQQQVRPLEAAFETLGQGVDHFVVLGDFNRNLA 284

Query: 215 ----------INYLGNNDDFWKTI------------------------------------ 228
                             D  K +                                    
Sbjct: 285 HELNQVAGAEPTRSDGGTDLAKPLATGARTRNLLLEINDGQPASSKAALLLPKCPGSAAL 344

Query: 229 -----DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ------ESFSE 277
                     +    ++           RN + +D+ ++ Q+    +          F  
Sbjct: 345 EAACEASKTGVPTAEQQTLLGGKTGLGCRNPVGLDHILVSQSLAAAVSNTIKVSIGPFGG 404

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
            L    +       +SDHCP+  D  F
Sbjct: 405 SLLPSVNRPDPLLAVSDHCPLVADVQF 431



 Score = 36.8 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 14/28 (50%)

Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLW 43
           T + A+ +R+ +WN+      + V  W
Sbjct: 20 STPAQAETLRIATWNLGWHVASDEVPAW 47


>gi|229587662|ref|YP_002869781.1| putative endonuclease/exonuclease/phosphatase family protein
           [Pseudomonas fluorescens SBW25]
 gi|229359528|emb|CAY46369.1| putative endonuclease/exonuclease/phosphatase family protein
           [Pseudomonas fluorescens SBW25]
          Length = 292

 Score = 80.8 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 83/292 (28%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   +       D D+V L
Sbjct: 28  PPDSRLRLLSFNIQVGISTEKYRHYLTRGWQHLLPHNGRAGNLQKIGNLLN--DFDLVAL 85

Query: 72  QEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE    +  +  +          +         R+       +  V  +      + +PL
Sbjct: 86  QEADGGSMRSGYINQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLKPTAIEDHPL 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G K        R A+ +      + + V+ +HL                    + Q  +
Sbjct: 146 PGPKG-------RGAILVRFGEGPEALVVVMMHLALG-------------ARTRTMQLAY 185

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I   K      V+ GD N   N           +  N  L               +
Sbjct: 186 IRELIGGYKHQ----VLMGDMNTHAND----------LLLNSPLRDLGLLAPQAEATFPS 231

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 232 WRPQRCLDHILLSPTLTLESVQVLAQPI--------------SDHLPVAVEI 269


>gi|327271381|ref|XP_003220466.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Anolis
           carolinensis]
          Length = 409

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 77/271 (28%), Gaps = 35/271 (12%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                L+         D+V LQE+ S          + W +          S    +  I
Sbjct: 27  QERVELIGDVLNQEGFDLVLLQEVWSEK--------DYWELKKKLCTCYPSSYYFKSGVI 78

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSF-----SRAGNRRAVELLVEINGKKIWVLDIHLK 165
            + + V  K+  +    +        +        G +    ++++I G    +   HL 
Sbjct: 79  GSGVCVFSKHQILDTFQHQYSVNGYPYMFQHGDWFGGKSVGLVVLKIKGIVFNIYVTHLH 138

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
           +    +          S    QA  L  +I    +     ++ GD N             
Sbjct: 139 AEYSREKDYY-----LSHRVVQAWELAQFIQHTCKGADVVLLGGDLNMHP-EDVVVRLLQ 192

Query: 226 KTIDPNDSLIRFPK---------EKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQ 272
             +   DS I   K            + C  NK         I IDY +  +   ++ I+
Sbjct: 193 GWVGLQDSFITAEKVEGCEDGCTLVPANCFTNKKELQCFPQGIRIDYILY-KGLSQYEIR 251

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +  E         ++    SDH  + +   
Sbjct: 252 CNSHETT--TGKAPNKDIPYSDHEAVMVTLS 280


>gi|326577094|gb|EGE26988.1| catabolite repression control protein [Moraxella catarrhalis O35E]
          Length = 335

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 87/310 (28%), Gaps = 69/310 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76
            +  Q +R+VS N+N L   E    +               ++    +AD+V +QE   +
Sbjct: 68  QTANQVLRVVSINVNGLRAAEKKGFF---------------EWLAVSNADVVCIQESRIT 112

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +      F    W       +   ++           +A+  +   V           DS
Sbjct: 113 HEQWTDKFRPKGWHTHLFAAQKAGYA----------GVAIYSRLPFVSVVDGLGFDLADS 162

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R       +L  +     +++  ++L S    +        + +      +  +  + 
Sbjct: 163 QGR-FICAQFDLSAQGIDHPVYIASLYLPSGSSGE-------EAQARKDLFLEKYRHILK 214

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEK 241
           Q ++     ++ GD+N     +   +                +   I      +   +  
Sbjct: 215 QWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFRVV 274

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +      N+           IDY     +  K  +                +    
Sbjct: 275 RKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKRTLNAWV-----------YKDSWF 323

Query: 293 SDHCPISIDY 302
           SDH P+ IDY
Sbjct: 324 SDHAPVIIDY 333


>gi|126733854|ref|ZP_01749601.1| exodeoxyribonuclease III, putative [Roseobacter sp. CCS2]
 gi|126716720|gb|EBA13584.1| exodeoxyribonuclease III, putative [Roseobacter sp. CCS2]
          Length = 262

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 69/307 (22%), Gaps = 73/307 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                R   D   + +  ++   D++ LQE  S      
Sbjct: 2   PFTLATWNIN--------------SVRLREDI--VAKLMRDEAPDVLCLQECKSPVDKIP 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +    +         L            +  +A+  K   V   +    G   +      
Sbjct: 46  LAQFQS---------LGYTHMAARGQKGYNGVAIFSKIPMVEAGAEDYAGLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKES 201
              +   +E          + + +       +           Q+  +L D       + 
Sbjct: 93  ---IAGKLENG--------VTIHNHYVPAGGDVADREVNEKFGQKLDYLTDMRDAYHAQK 141

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N         D                 +  +    +     +   +   
Sbjct: 142 PTKSILVGDLNIAPREDDVWDHKKLLKVVSHTPVEVAHFADVMDAGAWSDVTRNDITDGK 201

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+     +                        ++ SDH 
Sbjct: 202 LYSWWSYRAKDWDAADKGRRLDHIWATPDIKNAAHSS-------RVLRDARGWEKPSDHA 254

Query: 297 PISIDYD 303
           P+   +D
Sbjct: 255 PVFATFD 261


>gi|15677903|ref|NP_275071.1| exodeoxyribonuclease [Neisseria meningitidis MC58]
 gi|218767349|ref|YP_002341861.1| putative nuclease [Neisseria meningitidis Z2491]
 gi|157883966|pdb|2JC5|A Chain A, Apurinic Apyrimidinic (Ap) Endonuclease (Nape) From
           Neisseria Meningitidis
 gi|7227344|gb|AAF42400.1| exodeoxyribonuclease [Neisseria meningitidis MC58]
 gi|121051357|emb|CAM07648.1| putative nuclease [Neisseria meningitidis Z2491]
 gi|316983973|gb|EFV62952.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76]
 gi|319409609|emb|CBY89908.1| putative exodeoxyribonuclease [Neisseria meningitidis WUE 2594]
 gi|325139403|gb|EGC61943.1| exodeoxyribonuclease III [Neisseria meningitidis CU385]
 gi|325201128|gb|ADY96583.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76]
 gi|325208932|gb|ADZ04384.1| exodeoxyribonuclease III [Neisseria meningitidis NZ-05/33]
          Length = 259

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 47  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|153806611|ref|ZP_01959279.1| hypothetical protein BACCAC_00881 [Bacteroides caccae ATCC 43185]
 gi|149131288|gb|EDM22494.1| hypothetical protein BACCAC_00881 [Bacteroides caccae ATCC 43185]
          Length = 263

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 82/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L       L                ++ +  + DI+ LQE          
Sbjct: 2   MKIITYNVNGLRAAVSKGLP---------------EWLEQENPDILCLQETK-------- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + + +              +    ++ +A+  K        +   G          R
Sbjct: 39  LQPDQYPVEVFEALGYKSYLYSAQKKGYSGVALLTKQEP----DHVEYGMGMEAYDNEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    D  +       +      +  + ++ + ++S  
Sbjct: 95  F-----IRADFGDLSVVSVYHPSGTSGDERQ-------AFKMVWLEDFQKYVLELQKSRP 142

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  +D                W T       I   +          
Sbjct: 143 NLILCGDYNICHEPIDIHDPVRNAKNSGFLPEEREWMTRFLAAGFIDSFRMLYPEKQEYT 202

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY +  +     L+                     SDHCP+ +
Sbjct: 203 WWSYRFNSRAKNKGWRIDYCMASEPVRPLLMSARIL-----------NDAMHSDHCPMML 251

Query: 301 DY 302
           + 
Sbjct: 252 EI 253


>gi|148556812|ref|YP_001264394.1| exodeoxyribonuclease III [Sphingomonas wittichii RW1]
 gi|148502002|gb|ABQ70256.1| Exodeoxyribonuclease III [Sphingomonas wittichii RW1]
          Length = 271

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 79/307 (25%), Gaps = 72/307 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +++++ ++NIN                   +    L ++ +    D+  LQE+ + +  
Sbjct: 11  PRRMKIATFNING----------------IKARLPRLVEWLEQKAPDVACLQEIKTSDE- 53

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        +      +            +A+  K  + +++   L    D     
Sbjct: 54  ---------TFPIAEIEAAGYGAIWHGQKGFNGVAILAKGAQPVERRKGLPDDPDPSHSR 104

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                  +  E+NG  + V  I+L +       +  Y  +          L D       
Sbjct: 105 ------YIEAEVNG--VVVASIYLPNGNPAPGPKFDYKLA------WFDRLIDHAADLWA 150

Query: 201 SLVPFVIAGDFNRKIN-----------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             +P V+AGD+N                         +   ++ +               
Sbjct: 151 GEMPVVLAGDYNVIPTPSTDDVFSERAMASDALTQPESRAAFRRLCNAGWTDAVRTIHPH 210

Query: 244 RCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                ID+ ++   A   L            D      ++ SDH
Sbjct: 211 GPVYTFWDYQAGAWQRDAGFRIDHLMLSPAAADRLTGAGV-------DKDTRALEKASDH 263

Query: 296 CPISIDY 302
            P  I  
Sbjct: 264 APTWITL 270


>gi|260574370|ref|ZP_05842374.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2]
 gi|259023266|gb|EEW26558.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2]
          Length = 238

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 80/284 (28%), Gaps = 57/284 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NA 79
           A+ + + S+NI+           K        D          + ADI+ LQE      +
Sbjct: 4   ARDLSVASYNIH-----------KGIGADRRRDLARTAAVIAEIGADILALQEADMRFGS 52

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            A +   +          +    +RDS+      + VR   +        L G       
Sbjct: 53  RAGLLDLDRLRHDLGLVPVAVKGQRDSHGWHGNLLLVR-DTLVQEVHQLALPGL------ 105

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R A+   + I G+ + V+  HL                    + QAQ L   +   +
Sbjct: 106 -EPRGALMTDLVIKGQPLRVISAHLGLLPGS-------------RAVQAQALLAKLNTLE 151

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-IPID 258
               P ++ GD N            W+                +   A+   R   +P+D
Sbjct: 152 R--RPTLLMGDLNE-----------WRDTGSAAMGHFARHFTPASPRASYPARYPLLPLD 198

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ++        I                  +R SDH PI    
Sbjct: 199 RMMICDQGQLLDIAT----------HDSPLARRASDHLPIKARL 232


>gi|257870107|ref|ZP_05649760.1| exodeoxyribonuclease [Enterococcus gallinarum EG2]
 gi|257804271|gb|EEV33093.1| exodeoxyribonuclease [Enterococcus gallinarum EG2]
          Length = 261

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 74/304 (24%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                 +  +  DAD   LQE     A    
Sbjct: 12  MKFISWNVNGLRAIVKKNF---------------LEAFETFDADFFCLQETK-LQAGQIE 55

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S          A+A                        A  R
Sbjct: 56  LDLPGYTQYWNYAEKKGYSGTAIFAKEP-ALAAHYGIGIEE-------------HDAEGR 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +                         + ++    +   
Sbjct: 102 -----VITLEYPEFFLVTCYTPN-------AQNELRRLDYRMTWEDAFRAYL-TDLKQQK 148

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +     + + T+        F           
Sbjct: 149 PVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEEREKFSTLLSAGFTDTFRYFYPDAEGIY 208

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+  +    L+       +             SDHCP+ 
Sbjct: 209 SWWSYRFNARKNNAGWRIDYFVVSDDLNDRLVDAKIHTEIL-----------GSDHCPVE 257

Query: 300 IDYD 303
           +  +
Sbjct: 258 LQLN 261


>gi|229065513|ref|ZP_04200760.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
 gi|228715763|gb|EEL67537.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
          Length = 190

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 53/168 (31%), Gaps = 15/168 (8%)

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWIT- 196
            R+ +       G+ + V+  HL S     +           S     Q AQ +  ++  
Sbjct: 27  TRKPLAAEFTFQGQNVVVISNHLNSKLGDATPFGKVQPLVLKSEEKRVQLAQEVNHFVQG 86

Query: 197 -QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            Q+K +  P V+ GD N               +                     +  N  
Sbjct: 87  IQEKNTNAPVVVLGDMNDFEFSKPLEALEGTILKD-----MLNTVPKENRYTYIHEGNAQ 141

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +D+ ++  N        +  + ++   +I     R+SDH P+ +  D
Sbjct: 142 VLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGRVSDHDPVLVQID 185


>gi|149692696|ref|XP_001505181.1| PREDICTED: similar to APEX nuclease [Equus caballus]
          Length = 318

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|114799308|ref|YP_761397.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
           neptunium ATCC 15444]
 gi|114739482|gb|ABI77607.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
           neptunium ATCC 15444]
          Length = 354

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 84/318 (26%), Gaps = 53/318 (16%)

Query: 16  CTASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
              +    ++L+ WNI               G  L   S +    +   ++   +    D
Sbjct: 44  PLPAAEAPLKLMIWNIGYSGLGEESDFQTDGGKMLRPPSREAVEKNLAGIQAVLREEAPD 103

Query: 68  IVFLQEMGSYNAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           I+ +QE+ +   +                + + +S++                    +  
Sbjct: 104 ILMMQELAAPGFLTHTVDVLSGVKDALPGYGMVFSSDIRTRLLPGPLGLRHGLGTFAKVA 163

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
             R                           +E++G    ++++HL +F            
Sbjct: 164 GERTKLVRLTEEPEPIMGFIQRRYHVQVTELEVSGAPWVIINVHLSAFDEGAG------- 216

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------------NNDDFWKT 227
                 QQ + + D      +     V+ GD+N ++                 +D     
Sbjct: 217 ---TRMQQVREVLDLAQSHYQQGKAVVLGGDWNMRLAATDFAYQSDESALFWVHDFPRDA 273

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLR---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
           + P   ++  P    +R N             ID F+   N     +             
Sbjct: 274 LRPGWQIVIDPAVATTRTNEQPYKSGVNYTTIIDGFIASPNVTVEAV------------R 321

Query: 285 IKSRGKRLSDHCPISIDY 302
               G  ++DH P+   +
Sbjct: 322 GLDLGFAITDHQPVVATF 339


>gi|329945926|ref|ZP_08293613.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328528374|gb|EGF55352.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 277

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 79/311 (25%), Gaps = 65/311 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ + N+N +                 +    + ++      DI+ LQE+ +   +A  
Sbjct: 1   MRIATVNVNGIRA---------------AARKGMGEWLTASAPDILLLQEVRADERIAAD 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-----RVLQQSYPLLGAKDSFS 138
                +       R+   +           +AVR+             + P     D  S
Sbjct: 46  L-LPGYESAIWPCRIKGRAG--------VGVAVREGGPAGLGELRYGVAAPGTEEPDVDS 96

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  + L      +++ ++  +L S        +       L+      + D +   
Sbjct: 97  GRWLEADLTLTGLDGLERLTIISAYLHSGQLGTEKMDQKYAHLELVD---ARMADLLAAA 153

Query: 199 KESLVPFVIAGDFNRKINYLGNNDD-----------------FWKTIDPNDSLIRFPKEK 241
           + S    ++AGD N   +                                          
Sbjct: 154 RNSGPQVLMAGDLNVVRSERDIKSWKPNHNKIAGVMDEEIAHLEGWFSSGWVDASRRLVG 213

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           D           +           IDY V+     +     +        D       R 
Sbjct: 214 DEEQGPYTWWSQRGKAFDNNAGWRIDYQVITPALAERARSVAV-------DRAPDYASRW 266

Query: 293 SDHCPISIDYD 303
           SDH P+ I+Y 
Sbjct: 267 SDHAPLVIEYS 277


>gi|161016801|ref|NP_034191.3| deoxyribonuclease-1 precursor [Mus musculus]
 gi|6166163|sp|P49183|DNAS1_MOUSE RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I; Flags: Precursor
 gi|3172019|dbj|BAA28622.1| deoxyribonuclease I [Mus musculus]
 gi|109730889|gb|AAI15572.1| Deoxyribonuclease I [Mus musculus]
 gi|148664804|gb|EDK97220.1| deoxyribonuclease I, isoform CRA_b [Mus musculus]
 gi|148664805|gb|EDK97221.1| deoxyribonuclease I, isoform CRA_b [Mus musculus]
 gi|148664806|gb|EDK97222.1| deoxyribonuclease I, isoform CRA_b [Mus musculus]
          Length = 284

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 86/289 (29%), Gaps = 34/289 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+ ++NI T  E +  +   +             +       DI  +QE+   + V
Sbjct: 20  AGTLRIAAFNIRTFGETKMSNATLSVY---------FVKILSRY--DIAVIQEVRDSHLV 68

Query: 81  A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A  K+  +       +   +++      +         R   V +L       G +   +
Sbjct: 69  AVGKLLDELNRDKPDTYRYVVSEPLGRKSYKEQYLFVYRPDQVSILDSYQYDDGCEPCGN 128

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQ 197
              +R    +       ++    I                 + +    +   L D ++  
Sbjct: 129 DTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEIDALYDVYLDV 176

Query: 198 KKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            ++      +  GDFN   +Y+ ++      +  +        +       + +      
Sbjct: 177 WQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTVTSTHCAY--- 233

Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
            D  V+     +  ++  S     +  +   S    + +SDH P+ +  
Sbjct: 234 -DRIVVAGALLQAAVVPNSAVPFDFQAEYGLSNQLAEAISDHYPVEVTL 281


>gi|298368758|ref|ZP_06980076.1| endonuclease/exonuclease/phosphatase family protein [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282761|gb|EFI24248.1| endonuclease/exonuclease/phosphatase family protein [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 256

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 85/287 (29%), Gaps = 48/287 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               V + S+N++             S          +     +L +D+ FLQE+   + 
Sbjct: 2   SPTPVTVTSYNMH----------KGMSALNRKVQLNSMADALHDLRSDVFFLQEVQGRHQ 51

Query: 80  VA----KVFPKNTWCIFYSTE--RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                   FP+     F         ++ K       H   A+  +       +  +   
Sbjct: 52  ARSNKIDGFPEQPHYDFLGERLSYNRSYGKNAVYPQRHHGNAILSRLPIETLHNLNIT-- 109

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
               +R   R  +   V   G +  ++ +                      ++Q + + +
Sbjct: 110 ---VNRLEQRGVLHCEVLPEGWETSLVCLCAHLNLREPD-----------RAKQYRAIFE 155

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           +++   +   P +IAGDFN        +    K ++ ++    F      R     +   
Sbjct: 156 YVSMHVDPASPLIIAGDFNDWREKSALS--LGKALNLDE---VFVDGNGRRPKTFPSRMP 210

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            + +D                   +     + K   + LSDH P+S+
Sbjct: 211 FLSLDRVYTRN----------LEVLDAQIHNNK-HWQHLSDHLPLSV 246


>gi|237795265|ref|YP_002862817.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Ba4 str. 657]
 gi|229264066|gb|ACQ55099.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Ba4 str. 657]
          Length = 352

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 106/321 (33%), Gaps = 64/321 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               +V++NI               G     +S ++T  +   +  + K  ++  +FLQE
Sbjct: 53  DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQE 112

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------- 123
           + + +   + F  + +    ++ ++ + S   +       + + K +  V          
Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKVYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170

Query: 124 -----LQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177
                 +  YP   +        +R  +E  + + NG+++ +++ HL ++          
Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRISLENGRELVLINSHLSAYDKGG------ 224

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTI 228
                +  QQ  +LK++I ++ +     ++ GD+N  I               D   K  
Sbjct: 225 ----KIRKQQLSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIP 280

Query: 229 DP--NDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYN 281
           +    +       +       +             ID F++  N    +       + + 
Sbjct: 281 NDFKPEGFKWVADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNI--EVTSVKAHSMEFK 338

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                       DH P+++++
Sbjct: 339 NT----------DHNPVNMEF 349


>gi|311064022|ref|YP_003970747.1| exodeoxyribonuclease III [Bifidobacterium bifidum PRL2010]
 gi|310866341|gb|ADP35710.1| Xth Exodeoxyribonuclease III [Bifidobacterium bifidum PRL2010]
          Length = 285

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 71/282 (25%), Gaps = 42/282 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIF----YSTERLINHSKRDS 106
           +    +  +A     DI  +QE+ +    +  +F +  +        + +  +       
Sbjct: 15  AKRKGIETWAGEHAPDIWCMQEVRAPQDELDPIFGEFGFEYATAGKIADQSELTAMNEVC 74

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  + +        ++       +D  S    R     +    G  I V  +++ +
Sbjct: 75  RVKGRAGVGLLTDLPVTARRYGLSGLDEDVDS---GRWIEADVTTPQGYGITVACVYVHA 131

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216
               D ++         L      + +   +        V+ GDFN              
Sbjct: 132 GNSDDPVKMAQK--YRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHTPLDIKNAKAN 189

Query: 217 ------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFV 261
                          + +   + +                   +           IDY  
Sbjct: 190 IKHAGFLPAERAYIDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDNNVGWRIDYQF 249

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +       +   +  D   S   R SDH P+++ YD
Sbjct: 250 ATPELAE-------TARGFVIDKAPSYDARWSDHAPLTVTYD 284


>gi|326774141|ref|ZP_08233423.1| exodeoxyribonuclease III [Actinomyces viscosus C505]
 gi|326636280|gb|EGE37184.1| exodeoxyribonuclease III [Actinomyces viscosus C505]
          Length = 277

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 80/310 (25%), Gaps = 65/310 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ + N+N +                 +    + ++      DI+ LQE+ +   +A  
Sbjct: 1   MRIATVNVNGIRA---------------AARKGMGEWLAASAPDILLLQEVRADEQIAVD 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-----RVLQQSYPLLGAKDSFS 138
                +       R+   +           +AVR+             + P     D  S
Sbjct: 46  L-LPGYEAAIWPCRIKGRAG--------VGVAVREGGPATFGELRYGVAAPGTEEPDVDS 96

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  + L      +++ V+  +L S        +       L+  +   L   +   
Sbjct: 97  GRWLEADLSLTGFDGIERLTVISAYLHSGQLGTEKMDQKYAHLELVDARMAEL---LAAA 153

Query: 199 KESLVPFVIAGDFNRKINYLGNNDD-----------------FWKTIDPNDSLIRFPKEK 241
           ++     V+AGD N   +     +                                    
Sbjct: 154 RDGGPQVVMAGDLNVVRSERDIKNWKPNHNKIAGVMDEEIAHLEGWFASGWVDASRHLVG 213

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           D           +           IDY V+     +     +        D       R 
Sbjct: 214 DEEQGPYTWWSQRGKAFDNNAGWRIDYQVLTPALAERAHSVTV-------DRAPDYASRW 266

Query: 293 SDHCPISIDY 302
           SDH P+ ++Y
Sbjct: 267 SDHAPLVVEY 276


>gi|284033875|ref|YP_003383806.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813168|gb|ADB35007.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 320

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/329 (12%), Positives = 95/329 (28%), Gaps = 61/329 (18%)

Query: 24  VRLVSWNINTLSEQ-----------------EGVSLWKNSVKRT--------------TS 52
           + + ++N+N L ++                      + +  +R                +
Sbjct: 3   LTVGTFNLNNLFDRWNFAGAVEVLAQGSSTVPATYTFDDEHRRRLQLDGRGKLLVSKPAA 62

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           D   + Q     D D+  +QE+ + + + +   ++    +     +       ++     
Sbjct: 63  DTDRIAQRLLEADVDVWVVQEIENVDVLREFNREHLNGAYRHVMVIDG-----NDATRFI 117

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRA-GNRRAVELLVEINGKK--IWVLDIHLKSFCF 169
            I +  +       SY  +   D  SR   +R  VE+ +  +  +  + V   HLKS   
Sbjct: 118 DIGILSRRPIGGVTSYQRVFHPDLPSRPVFSRDLVEVEILDDRGRKLLTVFGTHLKSKFV 177

Query: 170 L---DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
                      + S  L ++QA+ +   I  +  +   +++ GD N              
Sbjct: 178 DFTVPDPAAAAAESDLLRTRQAETITRIIASRMSTRQRYLLCGDMNDVPGSPTLAAFEQA 237

Query: 227 TIDPN-------DSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQES 274
            +           ++    +        +        R+   ID   +       L    
Sbjct: 238 GLVDALRTPKEVGAVKTKVELPTDPAWTSTFKASGQPRSFDLIDQIWLSPALAPKLTAAW 297

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +   +  +DH P  I  D
Sbjct: 298 IG-------RRRKLARDGTDHDPAWISLD 319


>gi|330972149|gb|EGH72215.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 291

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 81/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      +    +     +          +   +       D D+V L
Sbjct: 30  PQDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN--DFDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ ++L                    ++Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMYLALGT-------------RTRTRQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271


>gi|317014940|gb|ADU82376.1| exodeoxyribonuclease III [Helicobacter pylori Gambia94/24]
          Length = 250

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGIDIKEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VITCEFESFYLVNVYTPNSQQALSRLSYRMNWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                     + +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNVGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|285017645|ref|YP_003375356.1| hypothetical protein XALc_0850 [Xanthomonas albilineans GPE PC73]
 gi|283472863|emb|CBA15368.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 255

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 86/294 (29%), Gaps = 56/294 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIV 69
           TA   + +R+++ NI   S     S +            R  +    + Q A     DIV
Sbjct: 2   TAPATRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPAGRKRNSLDTIAQLASAH--DIV 59

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSY 128
            LQE    +  +    +  +    +     +H   R       +A  +  +   +  Q +
Sbjct: 60  GLQESDPGSLRSGFTNQTHYLAERAGFHYWSHQPNRRVGGVASSANGLLSRLEPLEVQDH 119

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            L G      R G R  +        + + +   HL                 +  + Q 
Sbjct: 120 ALPG------RLGGRGVLLAKFGDGNEGLAIAVAHLSLG-------------ATSRTMQL 160

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            ++ + +     +    ++ GDFN   +        ++           P          
Sbjct: 161 AFIAELLADHPNA----ILMGDFNCVADRPEM-QLLYQRTRLQPPACVVP--------TF 207

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + R +  ID+ ++  +                 +  ++     SDH  ++ + 
Sbjct: 208 PSWRPQRAIDHILLSDSLRC--------------NAHRAVPAAFSDHLALTTEI 247


>gi|227502111|ref|ZP_03932160.1| endonuclease/exonuclease/phosphatase [Corynebacterium accolens ATCC
           49725]
 gi|227077170|gb|EEI15133.1| endonuclease/exonuclease/phosphatase [Corynebacterium accolens ATCC
           49725]
          Length = 905

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/337 (12%), Positives = 99/337 (29%), Gaps = 62/337 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY---------------------TLLRQY 60
            +  + ++N+       G     ++      +                        +   
Sbjct: 492 GEYTIGAFNVLNYFTSLGEEYGGSAYTDREGNKVTVNRGKTRGAYTESALQDQERKIVAA 551

Query: 61  AKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYSTERLINHSKRD---- 105
              LDAD++ L E+               A+ ++  K            +    +D    
Sbjct: 552 INGLDADVIGLSEIEDGYAVTGDFNQRDKALKRLTEKLNEAAGSEKWAFVPSPSKDQVPE 611

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
             + I TA    K  V+ + +S      + S +           ++ + +    +  H K
Sbjct: 612 RPDVIRTAFIYHKDVVKPVGESRIFQDPRFSGTAREPLAQEFQPLKSDDESFVAVANHFK 671

Query: 166 SFC----FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGN 220
           S        +   +    + ++ + QAQ + D + ++ +    P    GDFN   +    
Sbjct: 672 SKGSVAKGDEDSGDGQGNNPNVRNAQAQAVLDALHKQDDWKDKPLFALGDFNTYTHETAL 731

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
           +      +  ND      ++  +   + +       +D+ + ++ A   L       I  
Sbjct: 732 D------VFRNDGFTVPAEKYGADT-SYQFGGLLGTLDHVLANEVASGALADAQVWNINA 784

Query: 281 NEDDIKSRGKR--------------LSDHCPISIDYD 303
           +E       +R               SDH P+ + + 
Sbjct: 785 DEPVAFEYSRRNYNVVDFYDDSPFRASDHDPVKVGFT 821


>gi|21225866|ref|NP_631645.1| hypothetical protein SCO7604 [Streptomyces coelicolor A3(2)]
 gi|11322393|emb|CAC16706.1| hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 294

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 73/285 (25%), Gaps = 61/285 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--- 81
           R+++WN+                    S+              ++ +QE  + +      
Sbjct: 63  RVMTWNLCN--------------PCDASNLDR-AAEIAAHAPQVIGMQEACARDVDRIRD 107

Query: 82  --KVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             + F    + + + S  +  +       N      A+          +           
Sbjct: 108 YLEAFHGLVYHVAHGSVLQNWSRCGGAPWNPGGFGQAILSAAPITDAVNVEYPDGG---- 163

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            + +R  + +  E+ G+ + V + HL                    + Q + L   + + 
Sbjct: 164 -SEDRGYLAVTTEVGGRSVRVFNTHL-----------AQRRQEEFRTDQVRVLAKEVARH 211

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           + +    ++ GDFN         D  W      D            C    + +     D
Sbjct: 212 ERA----IVVGDFNAVP-EASELDPMWSLATDTDPQCHPAPG--GTCEPTTDWQ--SKFD 262

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y  +       +       +              SDH  +  D D
Sbjct: 263 YVFLRG-----VAPREHRVVRTAH----------SDHDLLYADLD 292


>gi|157125734|ref|XP_001660755.1| neutral Sphingomyelinase, putative [Aedes aegypti]
 gi|108882608|gb|EAT46833.1| neutral Sphingomyelinase, putative [Aedes aegypti]
          Length = 420

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 83/298 (27%), Gaps = 40/298 (13%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A ++ +++ NI  +                      +     + + DIV LQE+ S +  
Sbjct: 2   ALELSVLTLNIWGIPYVSKDRA---------VRVEAIGDVLSSGNYDIVSLQEVWSDSDY 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----- 135
             +  +    + ++                 + +A+  +   V    +            
Sbjct: 53  QYLKKRVEGVLPFAHYFYSGVVG--------SGLALLSRYPIVSALFHAWSVNGYVHRIQ 104

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                G +      + +N + + V   HL +       +       +    QA     +I
Sbjct: 105 HGDWFGGKGVGLAKIAVNDQLVNVYAAHLHA-----EYDRKCDDYMAHRVIQAYDTAQFI 159

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCN 246
              + + V  ++AGD N +   L            D   K +     L      ++S  +
Sbjct: 160 ESTRGNAVMQILAGDLNTEPGDLAYRVLQTNAKLIDTADKKLYAAGHLGTNEIGRNSYTD 219

Query: 247 ANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +      IDY +      +          L   D I  +    SDH  +    
Sbjct: 220 PETGKKYPQGKRIDYIMYR--IGEHFEGRLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275


>gi|282880102|ref|ZP_06288822.1| exodeoxyribonuclease III [Prevotella timonensis CRIS 5C-B1]
 gi|281305975|gb|EFA98015.1| exodeoxyribonuclease III [Prevotella timonensis CRIS 5C-B1]
          Length = 249

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 78/303 (25%), Gaps = 79/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +  ++                + LDAD   LQE          
Sbjct: 1   MKFISWNVNGLRACVKKNFQES---------------FQQLDADFFCLQETKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K+  +       +   D   R    
Sbjct: 45  LQFPGYTSYWNYAEKKGY----------SGTAIYTKHKPIHVSYGLGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ +++ +        +               L            
Sbjct: 91  -----VITLEMEDFFLITVYVPNSQDELKRLDYRMKWEDDFRAYITQLDQI--------K 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD N                         +    +  N  +  F      +    
Sbjct: 138 PVIICGDLNVAHEEIDLKNPKTNKRNAGFTDEERNKMTRLLDNGFIDTFRYLYPEQI-TY 196

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ +   + L        +             SDHCP+ 
Sbjct: 197 SWWSYRFRAREKNAGWRIDYFLISERLKERLHDAKIHTEI-----------MGSDHCPVE 245

Query: 300 IDY 302
           ++ 
Sbjct: 246 LEL 248


>gi|239999924|ref|ZP_04719848.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae 35/02]
 gi|240116863|ref|ZP_04730925.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID1]
 gi|268595731|ref|ZP_06129898.1| exodeoxyribonuclease [Neisseria gonorrhoeae 35/02]
 gi|268602539|ref|ZP_06136706.1| nuclease [Neisseria gonorrhoeae PID1]
 gi|293397969|ref|ZP_06642175.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62]
 gi|268549120|gb|EEZ44538.1| exodeoxyribonuclease [Neisseria gonorrhoeae 35/02]
 gi|268586670|gb|EEZ51346.1| nuclease [Neisseria gonorrhoeae PID1]
 gi|291611915|gb|EFF40984.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62]
 gi|317165222|gb|ADV08763.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 259

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEA-DLS 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +                 ++ +AV  K           +G          R
Sbjct: 46  ADMKNPHGMHGYWHCA-------EKRGYSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFGRLGVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVMHTLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|257067959|ref|YP_003154214.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810]
 gi|256558777|gb|ACU84624.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810]
          Length = 270

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 87/295 (29%), Gaps = 42/295 (14%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    +++++ NI   S         +  +R       L    +  DAD+V  QE+   
Sbjct: 3   TAETSALKVLTQNIRFHSADTRSGEADHWPERAPV----LAHLLREADADVVGAQEV--- 55

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-----PLLG 132
             +A   P     +  + ERL    +     + +     R++        +     P L 
Sbjct: 56  --LASQLPVLDEALGATHERLGIGREGGGRGEHNLLFLRRERFEVRDWDQFWLSEQPALI 113

Query: 133 AKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +     R AV   V    +G++I +   HL                    ++ A+ 
Sbjct: 114 GSVGWDGHCPRIAVWARVLDRASGQEIVLAVTHLDH------------AGELARARGAEL 161

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKEKDSRCNANK 249
           L   + +   +  P V+ GDFN         D      ++    +      +D     + 
Sbjct: 162 LAARLREAAGA-APLVLMGDFNAAGGQSAAWDVLREAGLEDAHDVAAAHDGQDIGTFPDY 220

Query: 250 NLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    ID+ +                  Y     +  G+  SDH  +S   
Sbjct: 221 GAPEPGGTRIDWIL----------SRGLDVEQYRAWVPQLGGRAASDHATVSARL 265


>gi|160884105|ref|ZP_02065108.1| hypothetical protein BACOVA_02081 [Bacteroides ovatus ATCC 8483]
 gi|156110447|gb|EDO12192.1| hypothetical protein BACOVA_02081 [Bacteroides ovatus ATCC 8483]
          Length = 361

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 87/305 (28%), Gaps = 67/305 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+ + +  E                  +  Y  + +ADI+ LQE  +     
Sbjct: 99  GSIKILSYNVMSFNNLEKKDGKNP-----------VLSYLVDSNADIICLQEYNTATNKK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  ++      +      H +          +A   K   +           +   +  
Sbjct: 148 YLTEQDIKKALKAYPYQSVHQQG----KGDVQLACFSKFPILSIHPIEYESNYNGSMKY- 202

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
                  ++ +N   + +++ HL+S          Y                        
Sbjct: 203 -------VLNVNNDTLTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLA 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ + QA  +   I + K      ++ GDFN   +    +    + +D       F 
Sbjct: 256 EASAIRATQADSVAKTIAESKYPTT--IVCGDFNDG-SISYTHRILTQKLDD-----AFT 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  N   +             +    R  + SDH PI
Sbjct: 308 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 354

Query: 299 SIDYD 303
                
Sbjct: 355 WCYIS 359


>gi|149199714|ref|ZP_01876746.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera
           araneosa HTCC2155]
 gi|149137231|gb|EDM25652.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera
           araneosa HTCC2155]
          Length = 319

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/330 (13%), Positives = 94/330 (28%), Gaps = 56/330 (16%)

Query: 4   KYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           K  + L F  V   ++ AQ    K+R++S+NI    E  G             + +   +
Sbjct: 5   KLAIFLTFIQVFACSAYAQGKQAKLRVMSYNIYRGGEMFG------------RELSQTAK 52

Query: 60  YAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             +  +ADIV +QE  S       K+     W    +  + I  +  +   ++   + ++
Sbjct: 53  VIQEAEADIVGIQEPRSPKGFTTQKLAKLLDWNHSSNIRKGIILTPYEIIENLDGGVKIK 112

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                   Q                 + + +  + +            +  F+ +     
Sbjct: 113 LP----TGQEVYAFSLHLPSHPYQPYQLLGIRPKWHKNT--------NNIEFIKTEAEAI 160

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP------- 230
             +      + + L   I+   +   P  + GDFN   +             P       
Sbjct: 161 EWAKKARGAEIKKLLKVISSLPDKEAPVFVVGDFNEPSHLDWTEAAAKAGRHPIKVAYPN 220

Query: 231 ---------NDSLIRFPKEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQE 273
                    +DS      ++        + + K          ID+        K    +
Sbjct: 221 SVAMVKAGFSDSYRVIYPDEMKNPGLTWSPKYKADDPTTHLDRIDFVYFKGKGLKVTDAK 280

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              E   N D + +     SDH  +   + 
Sbjct: 281 IIGENSENADIVVTP--YPSDHRAVVATFT 308


>gi|6980832|pdb|1DEW|A Chain A, Crystal Structure Of Human Ape1 Bound To Abasic Dna
 gi|6980833|pdb|1DEW|B Chain B, Crystal Structure Of Human Ape1 Bound To Abasic Dna
          Length = 279

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 14  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 58

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 59  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 108

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 109 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 161

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 162 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 215

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 216 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 266

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 267 --GSDHCPITL 275


>gi|260495692|ref|ZP_05815815.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_33]
 gi|260196757|gb|EEW94281.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_33]
          Length = 253

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 79/301 (26%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                 +       Y    +ADI  LQE    +A    
Sbjct: 1   MKLISWNVNGIRA---------------AIKKGFLDYFNEQNADIFCLQETK-LSAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LELKGYHQYWNYAEKKGY----------SGTAIFTKQEPLSVS----YGLGIEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K +++ ++  +                         + ++   ++   
Sbjct: 91  -----VITLEFEKFYMVTVYTPN-------SKDELLRLDYRMVWEDEFRKYLKNLEKKK- 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                           +  +  +  +  F     +     
Sbjct: 138 PVVACGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLDSGFIDTFRYFYPNLEQVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+ +   K L+       +             SDHCP+ 
Sbjct: 198 SWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQI-----------EGSDHCPVV 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|254490888|ref|ZP_05104071.1| endonuclease/exonuclease/phosphatase family [Methylophaga
           thiooxidans DMS010]
 gi|224464060|gb|EEF80326.1| endonuclease/exonuclease/phosphatase family [Methylophaga
           thiooxydans DMS010]
          Length = 228

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 71/283 (25%), Gaps = 57/283 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81
           +++L S+NI+     +G                 +      L AD++ LQE+  +     
Sbjct: 2   QLKLASYNIHACIGTDGQFDPF-----------RIAAVINELGADVIALQEVEHHLVNDI 50

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +                   +       H   A+  +      Q   L     S     
Sbjct: 51  DLLDFLAQQTGMIALAGPTMLRES----RHYGNAILTRLTPESHQLLDL-----SLEDNE 101

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  ++L + I+  ++ V   HL                      Q Q +      K   
Sbjct: 102 PRGVIQLSLNIDDHRLLVYATHLGLKPV-------------ERRFQVQKILSLFETKTAD 148

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               V+ GD N    +           D                  +        +D   
Sbjct: 149 TT--VLMGDLNEWFLWGRPLRWLKAYFD---------ITPAINSFPSFWPFF--ALDRVW 195

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +               +L       +  K+ SDH P++ D  F
Sbjct: 196 VTPR----------HHLLNVSAHKTALAKKASDHLPVTADITF 228


>gi|148379821|ref|YP_001254362.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932125|ref|YP_001384119.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|153935873|ref|YP_001387659.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. Hall]
 gi|148289305|emb|CAL83401.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928169|gb|ABS33669.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|152931787|gb|ABS37286.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. Hall]
          Length = 352

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 101/311 (32%), Gaps = 44/311 (14%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               +V++NI               G     +S ++T  +   +  + K  ++  +FLQE
Sbjct: 53  DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQE 112

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127
           + + +   + F  + +    ++ +  + S   +       + + K +  V      L + 
Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 +  +    +       ++    +  V   + +    ++S  + Y     +  QQ
Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQ 230

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236
             +LK++I ++ +     ++ GD+N  I               D   K  +    +    
Sbjct: 231 LSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 290

Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID F++  N     ++       Y+ +   +    
Sbjct: 291 VADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNIEATSVKA------YSMEFKNT---- 340

Query: 292 LSDHCPISIDY 302
             DH P+ +++
Sbjct: 341 --DHNPVKMEF 349


>gi|134299043|ref|YP_001112539.1| exodeoxyribonuclease III [Desulfotomaculum reducens MI-1]
 gi|134051743|gb|ABO49714.1| Exodeoxyribonuclease III [Desulfotomaculum reducens MI-1]
          Length = 264

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 85/305 (27%), Gaps = 72/305 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K  + S+N+N                   S   LL ++      D++ LQE         
Sbjct: 2   KFTVASFNVN----------------SIRSRKELLLEWLLTNCPDVICLQE---TKVRDI 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP++ +                     +  +A+   +        PL       +  G 
Sbjct: 43  DFPEDFFK-------EKGFHAIYKGQKSYNGVAILSPHPIT-----PLNSDLGDVAEPGE 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            R +   V    K I +++ ++     ++S + +Y  S        + ++D+      S 
Sbjct: 91  ARLLAASV----KGIPIINTYIPQGQAVNSPKFSYKLS------WIKSMRDYFNTNYLST 140

Query: 203 VPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           +P +  GDFN        +D                              +  +      
Sbjct: 141 LPLLWMGDFNVAPEPKDVHDPKRLYGKVGFHPEEHLALQYVKEWGFQDVFRMHEPEAGHF 200

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            ID+    ++  K   +          D    R ++ SDH  I
Sbjct: 201 TFWDYRIPKGVERNLGWRIDHIWATESLAKRSTRAWI-------DMEPRRREKPSDHTLI 253

Query: 299 SIDYD 303
             +++
Sbjct: 254 LAEFE 258


>gi|317010103|gb|ADU80683.1| exodeoxyribonuclease III [Helicobacter pylori India7]
          Length = 250

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLVSWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFSKKEPLSVSYGINIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  N          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLNYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|256391129|ref|YP_003112693.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256357355|gb|ACU70852.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 802

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/335 (10%), Positives = 81/335 (24%), Gaps = 67/335 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+ A+ + + ++N+  L+  +  S ++       ++             DIV ++E+   
Sbjct: 483 ANPAKDLSVATYNVENLAPSDPDSKFQRLGAGIVTNLAT---------PDIVSVEEVQDN 533

Query: 78  NAVAK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117
           +                              +   +   +        +I T        
Sbjct: 534 SGATDDGTVAADQTLTKLTAAIAAAGGPKYAWREIDPANDKDGGQPGGNIRTVFLYNPAR 593

Query: 118 ---------------------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                                 K+        P      +     +R+ +       G  
Sbjct: 594 VTFVDTGAASVNRTTTGTQVVSKHGEPALSLSPGRIDPANPVWNSSRKPLVGQFSFRGHD 653

Query: 157 IWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           ++V+  H  +     + +         S    S QAQ   D++ +    +     V+ GD
Sbjct: 654 VFVIANHFDAKLGDQNQDGRFQYPAQSSALQRSGQAQVEHDFVQKLLDVDKKADVVVVGD 713

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKIPIDYFVMDQNAY 267
            N        +     T D     I                        +D+ ++ +   
Sbjct: 714 LNDYQFSPALSSLRTGTSDGTGPSILTDLISTLPTNEQYTYDYEGVSEVLDHILVSKGIK 773

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               Q                  + SDH P  +  
Sbjct: 774 DLSYQV--------VHVNAEYTDQASDHDPQVVRI 800


>gi|254486587|ref|ZP_05099792.1| exodeoxyribonuclease III [Roseobacter sp. GAI101]
 gi|214043456|gb|EEB84094.1| exodeoxyribonuclease III [Roseobacter sp. GAI101]
          Length = 290

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/308 (10%), Positives = 70/308 (22%), Gaps = 71/308 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +    L +WNIN                       ++ +  +    DI+ LQE  S    
Sbjct: 28  SMAFTLATWNIN----------------SVRLREPIVLKLLQEQGPDILCLQECKSP--- 68

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                K     F +                +  +A+  +                +    
Sbjct: 69  ---VDKIPTEAFAAA---GYTHMVARGQKGYNGVAILSRLPLEDVGDQDFADLGHARH-- 120

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V   +E     + + + ++ +    D  +   +            ++DW    K 
Sbjct: 121 -----VAARLENG---VTIQNFYVPAG--GDVADREVNEKFGQKLDYLAGMRDWFRGDKP 170

Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                ++ GD N                  ++     +           I   ++     
Sbjct: 171 RKS--ILVGDLNIAPREDDVWGHKQLLKVVSHTPIEVEKLAETQDAGGFIDITRQDIPEG 228

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           N       +            +D+     +                        ++ SDH
Sbjct: 229 NLYSWWSYRAKDWDAADKGRRLDHVWATPDISNAAHSS-------RVLRDARGWEKPSDH 281

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 282 APVFATFD 289


>gi|163860141|gb|ABY41236.1| probable endonuclease/exonuclease/phosphatase family protein
           [Pseudomonas fluorescens]
          Length = 292

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 82/298 (27%), Gaps = 58/298 (19%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLD 65
           +         ++RL+S+NI      E    +     +          +   +    K  D
Sbjct: 22  VTSTGLPGDSRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHTGRAGNLQKIGDLLK--D 79

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVL 124
            D+V LQE    +  +    +                  R+       +  V  +     
Sbjct: 80  FDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLGQHSNGVLSRLRPWA 139

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            + +PL G K        R A+        + + V+ +HL                    
Sbjct: 140 IEDHPLPGPKG-------RGAILARFGEGPEALVVVMMHLALG-------------ARTR 179

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           + Q  ++++ I   K      ++ GD N   +           +     L          
Sbjct: 180 TMQLAYIRELIGGYKHQ----ILMGDMNTHASD----------LLQTSPLRDLGLLAPQL 225

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + R +  +D+ ++        ++     I              SDH P++++ 
Sbjct: 226 EATFPSWRPQRCLDHILLSPTLTLERVEVLAQPI--------------SDHLPVAVEI 269


>gi|154502978|ref|ZP_02040038.1| hypothetical protein RUMGNA_00800 [Ruminococcus gnavus ATCC 29149]
 gi|153796517|gb|EDN78937.1| hypothetical protein RUMGNA_00800 [Ruminococcus gnavus ATCC 29149]
          Length = 250

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 78/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                        ++ +  DADI  LQE     A    
Sbjct: 1   MKLISWNVNGIRACVQKGF---------------LEFFREADADIFCLQETK-LQAGQIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +       +   D   R    
Sbjct: 45  LDLEGYEQYWN----------YAVKKGYSGTAVFTKKKPLNVTYGIGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ + + ++  +     +  +      S      + L++          
Sbjct: 91  -----VITLEFEEFYFVTVYTPNSQNELARLDYRMKWESDFLAYLKKLEE--------EK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  +     +  F      +    
Sbjct: 138 PVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTEMLNAGFIDTFRYFYPDQEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L                      SDHCPI 
Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKILT-----------DVMGSDHCPIE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|86159084|ref|YP_465869.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775595|gb|ABC82432.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 300

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 77/286 (26%), Gaps = 38/286 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           VR+VSWN++ L +    +          +     +    +      LD D+V LQE+ + 
Sbjct: 43  VRVVSWNVHDLFDDLDRTEPPGALDTVATAGEVDARLARVAAVLGRLDGDLVLLQEVETA 102

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                +  +  +      E                 +AV  +       S+       + 
Sbjct: 103 ALAEALAARAGYAQARLVEGNDPRG---------IDVAVLSRLPLRAYVSHRDERDA-AG 152

Query: 138 SRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                R  VE       G+ + ++  HL S    D        +           ++   
Sbjct: 153 RPLFPRDCVEAHAALPGGRTLALVGSHLSSALSDDGTRRAAQAARM---------REIAD 203

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +        V  GD N +                   +                  ++  
Sbjct: 204 RLLRDGARVVAGGDLNDEAGSF----ALGPLFGDGAWVDPAAALPPDAAWTWSGGGDRAA 259

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D+  + +     ++Q              +  +  SDH P+ +D 
Sbjct: 260 LDHLAVPRADAASVVQA--------AVAGGTDVEAASDHRPVVLDL 297


>gi|295691916|ref|YP_003600526.1| exodeoxyribonuclease iii [Lactobacillus crispatus ST1]
 gi|295030022|emb|CBL49501.1| Exodeoxyribonuclease III [Lactobacillus crispatus ST1]
          Length = 275

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 82/303 (27%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++L+          +  R      +L +   + + DI+ +QE            
Sbjct: 3   LISWNIDSLNA-----ALTGTSARAEETRQVLTK-IHDANPDIIAIQETKLRATGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           K      +     +  S  +     +       K       S P++GA +     G    
Sbjct: 57  KEVLAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKGLTPAVSEPIIGAPEPMDHEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +   K +V  ++  +                   +  Q L        +   P 
Sbjct: 114 ---IITLEFDKYFVTQVYTPNSGSGLKRLAERQVWDQKYIEYLQKL--------DEKKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +        F K      +    
Sbjct: 163 LASGDYNCAHTEIDLKHPENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGEITDVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++       +++    +                DHCPI +
Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRA-----------DHCPILL 271

Query: 301 DYD 303
           + +
Sbjct: 272 EIN 274


>gi|256833636|ref|YP_003162363.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603]
 gi|256687167|gb|ACV10060.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603]
          Length = 264

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 69/305 (22%), Gaps = 69/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL SWNIN                   +         +  D D++ LQE    +     
Sbjct: 1   MRLASWNIN----------------SIRARTDRALAVLERHDIDVLALQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGN 142
                     +      +       +    +A+  +         +P             
Sbjct: 41  ------QFPVAAFEEAGYEVAHVGVNQWNGVALISRVGLDDVHRAFPGQPGFGEDPVVEA 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +        + V  +++ +   +D     Y        Q    LK+   Q     
Sbjct: 95  RAVGAIC-----GGVRVWSLYVPNGREIDHPHYHYK------LQWLHQLKNSAQQWTADD 143

Query: 203 VP--FVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                 + GD+N                  +        +                    
Sbjct: 144 PAAQVALVGDWNVAPRDTDVWDREFFEGKTHVTDPERAAFAAFGDIGYTEVSRVHVPEDV 203

Query: 246 NANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               +           + ID+        K +            D  + +GK  SDH P+
Sbjct: 204 YTYWDYQQLRFPKNQGMRIDFAWCSPALTKRVTGVEI-------DRNERKGKGASDHVPV 256

Query: 299 SIDYD 303
            +D  
Sbjct: 257 ILDIS 261


>gi|168184533|ref|ZP_02619197.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Bf]
 gi|182672340|gb|EDT84301.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Bf]
          Length = 352

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 105/321 (32%), Gaps = 64/321 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               +V++NI               G     +S ++T  +   +  + K  ++  +FLQE
Sbjct: 53  DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQE 112

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------- 123
           + + +   + F  + +    ++ +  + S   +       + + K +  V          
Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170

Query: 124 -----LQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177
                 +  YP   +        +R  +E  + + NG+++ +++ HL ++          
Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRISLENGRELVLINSHLSAYDKGG------ 224

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTI 228
                +  QQ  +LK++I ++ +     ++ GD+N  I               D   K  
Sbjct: 225 ----KIRKQQLSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIP 280

Query: 229 DP--NDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYN 281
           +    +       +       +             ID F++  N    +       + + 
Sbjct: 281 NDFKPEGFKWVADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNI--EVTSVKAHSMEFK 338

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                       DH P+++++
Sbjct: 339 NT----------DHNPVNMEF 349


>gi|332885280|gb|EGK05531.1| exodeoxyribonuclease III [Dysgonomonas mossii DSM 22836]
          Length = 254

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 90/305 (29%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                      L Q+ +    DI+ LQE+ +      V
Sbjct: 1   MKVISYNVNGIRAAVNKG---------------LYQWLEQESPDILCLQEIKAMEDQIDV 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +           N+    +    ++ + +  K    L +    +   D   R    
Sbjct: 46  LTIQSLGY--------NYYFHPAEKKGYSGVGILTKRTPDLVKIGMGIPDYDREGR---- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++  +   + V+ +++ S    D  ++       +  +       +I   ++   
Sbjct: 94  -----VLRADYGDVTVICVYIPSGTMGDIRQD-------IKMKFLADFTHFINNLRKERP 141

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD+N                   +L     ++        +  F     S     
Sbjct: 142 ELIICGDYNICHKPIDINHPERHTKSSGFLPEERQWFDEFIDTGLIDTFRVYDQSPEK-Y 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY ++ + A   L   +    +Y            SDHCP+ 
Sbjct: 201 SWWSYRAGARGKNLGWRIDYHIITEEARPRLNNAAILSEIY-----------FSDHCPVV 249

Query: 300 IDYDF 304
           ++  F
Sbjct: 250 VEMSF 254


>gi|320094390|ref|ZP_08026175.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319978676|gb|EFW10234.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 275

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/267 (10%), Positives = 65/267 (24%), Gaps = 43/267 (16%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            + +      + +QE+ +   +++      W   +   R+   +           IAV +
Sbjct: 23  DWLEEAAPTALLMQEVRAPEEISRGILPGQWDSVWVPCRIKGRAG--------VGIAVHR 74

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
               ++      L   +S + +G    V +  +     + ++  +  S       +    
Sbjct: 75  DRGALVGPPRTALDGAESDADSGRWLEVLVEADGAPSPVRLVSAYFHSGEKDTPKQEAKM 134

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------- 223
                +  +   L   +          V+ GDFN   +     +                
Sbjct: 135 AHLPRIGARMAEL---LASAASGGEQAVVCGDFNVVRSRADIKNWTSNHNKRAGVLDEEI 191

Query: 224 -FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273
            F                             +           +DY        +     
Sbjct: 192 AFLNRWVEEGWHDVVRDLAGQVQGPYSWWTWRGQAFDNDAGWRLDYQFATPGLARAARS- 250

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISI 300
                 +      S  +R SDH P+ +
Sbjct: 251 ------FTIGRAPSYDQRFSDHAPVGV 271


>gi|311743284|ref|ZP_07717091.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272]
 gi|311313352|gb|EFQ83262.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272]
          Length = 254

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/271 (9%), Positives = 63/271 (23%), Gaps = 41/271 (15%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            S    +  + +  D D++ +QE                         + +    +  + 
Sbjct: 5   RSRIDRVVGFLERHDVDVLAIQETKCRED----------QFPGLELSALGYEYAHAGLNQ 54

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              +A+  +       +               R      +      + V  +++ +   L
Sbjct: 55  WNGVAIVSRVGLDDVATTFADDQPTFADVLEPRS-----IGATCGGVRVWSLYVPNGREL 109

Query: 171 DSLENTYSPSCSLLSQQA--QWLKDWITQK---------KESLVPFVIAGDFNRKINYLG 219
           D     Y  +     ++A  +WL      +                     F    +   
Sbjct: 110 DHDHYVYKLAWLDRLREAGQEWLAADPDAQIALTGDWNVAPQDEDVWDMAAFAGSTHVSE 169

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQNAYKFLI 271
                ++ +                                  + ID+ +        + 
Sbjct: 170 PERAAFRAVVDAGYADVVRPHTPGPGVYTFWDYQQLRFPKREGMRIDFQLCSPALAARVE 229

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +          D  + +GK  SDH P+ ID 
Sbjct: 230 KGWI-------DREERKGKGASDHAPVVIDL 253


>gi|296826702|ref|XP_002851020.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Arthroderma otae CBS 113480]
 gi|238838574|gb|EEQ28236.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Arthroderma otae CBS 113480]
          Length = 703

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/359 (11%), Positives = 90/359 (25%), Gaps = 77/359 (21%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K  ++++N   +  +  +      +          LL    +  DADIV LQE+   + 
Sbjct: 319 DKFTVLTYNTLCDKYATHQQYGYAPSRALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 378

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++  S  +              K + + +         
Sbjct: 379 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 438

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++V     ++G++I V++ H+        ++   S  
Sbjct: 439 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVNAHIYWDPAYKDVKLVQSAI 498

Query: 181 CSLLSQQAQWLKDWITQKKESLV-----------------------------------PF 205
                 Q       I    +                                      P 
Sbjct: 499 MMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETGNENTSPPTPVEPSPSVEYSSASQIPT 558

Query: 206 VIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC----- 245
           ++ GDFN + +    N               +  +  +        F  +          
Sbjct: 559 LVCGDFNSRPSSAVYNLLAHGRLEEDHPDLQNRLYGNLTRQGMTHPFTLKSAYSAIGELS 618

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDYD 303
             N        IDY     N  +        +  Y             SDH  +  ++ 
Sbjct: 619 FTNYTPGFTDVIDYIWYSSNLLQVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALMAEFS 677


>gi|189500051|ref|YP_001959521.1| Endonuclease/exonuclease/phosphatase [Chlorobium phaeobacteroides
           BS1]
 gi|189495492|gb|ACE04040.1| Endonuclease/exonuclease/phosphatase [Chlorobium phaeobacteroides
           BS1]
          Length = 341

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/342 (11%), Positives = 86/342 (25%), Gaps = 59/342 (17%)

Query: 3   RKYVLALVFFLVPCTA-----SVAQKVRLVSWNINTLSEQ-------EGVSLWKNSVKRT 50
           R   + L+  L   +      +   K+ ++ WN+  L +        +     +   + T
Sbjct: 6   RLICITLLLSLTAVSPFNQALADNDKLTMMWWNVENLFDTVDDPLTRDSEFTPEGKKRWT 65

Query: 51  TSDY----TLLRQYAKNLD------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100
                     +    K           I+   E+ + N   K+        + +     N
Sbjct: 66  EKKLLLKCMRISHIVKVAALKTGGYPGILAFAEVENLNVFKKLLSFLPDNSYKTAYHASN 125

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                    I  A+A   + +R+L+     L  + +      R         +    ++L
Sbjct: 126 -----DPRGIDIALAYDAEKIRLLRT----LSYRVNLRERNTRDITLYSFTADNCPFFLL 176

Query: 161 DIHLKSFCFLDSLENT-YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
             H  S     +        +          L+        +    V+ GDFN       
Sbjct: 177 VNHWPSRSLDQAWSEPFRLQAAQTAKTIIDSLRK-----ISTDADIVVMGDFNDDPGDKS 231

Query: 220 NNDDFWKTIDPNDSL-----IRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQE 273
             +    T + +          F     SR   +   R++    D  ++    +      
Sbjct: 232 IQEILHATTERDAFSRKSIGKLFNFWTKSREKGSCYFRSRWFQFDQVMVSSGLFDDRGLS 291

Query: 274 SFSE----------------ILYNEDDIKSRGKRLSDHCPIS 299
              +                  Y            SDH P+ 
Sbjct: 292 VPEDAFSCFHIRHMEKGSNRRPYATYKGPKYLGGYSDHFPLL 333


>gi|330972028|gb|EGH72094.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 233

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 41/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107
              LR+  + + ADIVFLQE+     +   +V    T   +     S      + +    
Sbjct: 12  LPELREAVRTVSADIVFLQEVHGEQQSHARRVKDWPTISQYEFLADSMWNDFAYGRNAVY 71

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            D     A+  K   +  ++  +     S      R  +  ++++      V  I +   
Sbjct: 72  PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILDVPHAG-RVHAICVHLG 125

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         S   QQ + L + + +      P ++AGDFN              +
Sbjct: 126 LR-----------ESHRRQQLKLLNELMAR-IPEGEPVIVAGDFNDWRQRAD------AS 167

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +  +     F +   +   +       + +D   +           S             
Sbjct: 168 LQGSGLHEVFVERFGAPAKSFPARWPLLCLDRIYVRNATSHRPKVLS-----------SR 216

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P++++  
Sbjct: 217 PWSHLSDHAPLAVELT 232


>gi|323343527|ref|ZP_08083754.1| AP endonuclease domain protein [Prevotella oralis ATCC 33269]
 gi|323095346|gb|EFZ37920.1| AP endonuclease domain protein [Prevotella oralis ATCC 33269]
          Length = 361

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 85/304 (27%), Gaps = 71/304 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++++S+N+   S  +       ++           Q+    +ADIV LQE   +   
Sbjct: 97  PNAIKVLSYNVWMFSGWDETGKNNPTL-----------QFIAEQNADIVCLQEAEGWGIY 145

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                     ++   +        D        +A+  K   + ++        +  +  
Sbjct: 146 KAKADSVMNGLYQYADTSRRKDGGDV-------LAIYSKYPIIKKERIVYPSKTNHSA-- 196

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL------------------------ENT 176
                    ++ING  + V++ H +S                                + 
Sbjct: 197 ------AFYLKINGDTVIVINNHFESIGLSPEDKTNFKEMVKGDMNAKCVEKESKKLIDK 250

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + +    + Q   +  +I + K   +  ++ GDFN             K++        
Sbjct: 251 LAEASKRRAPQVDAVAQYIYEHKR--MSMILCGDFNDGP-LSYTRRIMAKSLTD-----C 302

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           + +  +    +  +    + ID  +   +     +                   + SDH 
Sbjct: 303 YVESGNGIGISYHHGGFYVRIDNIMCSND----WVPYGCKVDNRV---------KSSDHY 349

Query: 297 PISI 300
           PI  
Sbjct: 350 PIYC 353


>gi|299144762|ref|ZP_07037830.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
 gi|298515253|gb|EFI39134.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
          Length = 336

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 87/305 (28%), Gaps = 67/305 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+ + +  E                  +  Y  + +ADI+ LQE  +     
Sbjct: 74  GSIKILSYNVMSFNNLEKKDGKNP-----------VLSYLVDSNADIICLQEYNTATNKK 122

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  ++      +      H +          +A   K   +           +   +  
Sbjct: 123 YLTEQDIKKALKAYPYQSVHQQG----KGDVQLACFSKFPILSIHPIEYESNYNGSMKY- 177

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
                  ++ +N   + +++ HL+S          Y                        
Sbjct: 178 -------VLNVNNDTLTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLA 230

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ + QA  +   I + K      ++ GDFN   +    +    + +D       F 
Sbjct: 231 EASAIRATQADSVAKTIAESKYPTT--IVCGDFNDG-SISYTHRILTQKLDD-----AFT 282

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  N   +             +    R  + SDH PI
Sbjct: 283 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 329

Query: 299 SIDYD 303
                
Sbjct: 330 WCYIS 334


>gi|73542888|ref|YP_297408.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
 gi|72120301|gb|AAZ62564.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
          Length = 259

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 74/291 (25%), Gaps = 61/291 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A+   ++ + S+NI+     +G  +              + +  + L AD+V LQE+
Sbjct: 18  APLAARHAEIAVASYNIHGGVGTDGHFVP-----------KRICEVLRELRADLVALQEV 66

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +      +    +                   +D     A+  +   +  +   L    
Sbjct: 67  ETRATGFDMLGFLSRHTGLHAIPGPT----LVRDDGDYGNALLTRYAPLRVRHIDLSVKG 122

Query: 135 DSFSRAGNRRAVELL-----VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                   R A++       +E     + V+  HL                      Q +
Sbjct: 123 -----REPRGAIDAQLQCDAIEAGTFALRVIATHLGLLPS-------------ERRAQVR 164

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L   + +      P ++ GD N    +           +                +   
Sbjct: 165 RLLTALAEVPA--QPTILLGDVNEWFLWGRPLRWLHAYFER-----------TPHVSTFP 211

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +    + +D       A           ++          +  SDH P+  
Sbjct: 212 SRCPVLALDRIWTSPRA----------HLVAVSSHRSPVARLASDHLPLLA 252


>gi|326573473|gb|EGE23441.1| catabolite repression control protein [Moraxella catarrhalis
           101P30B1]
          Length = 336

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 87/310 (28%), Gaps = 69/310 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76
            +  Q +R+VS N+N L   E    +               ++    +AD+V +QE   +
Sbjct: 69  QTANQVLRVVSINVNGLRAAEKKGFF---------------EWLAVSNADVVCIQESRIT 113

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +      F    W       +   ++           +A+  +   V           DS
Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAGYA----------GVAIYSRLPFVSVVDGLGFDLADS 163

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R       +L  +     +++  ++L S    +        + +      +  +  + 
Sbjct: 164 QGR-FICAQFDLSAQGIDHPVYIASLYLPSGSSGE-------EAQARKDLFLEKYRHILK 215

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEK 241
           Q ++     ++ GD+N     +   +                +   I      +   +  
Sbjct: 216 QWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWLDHIYDELGYVDTFRVV 275

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +      N+           IDY     +  K  +                +    
Sbjct: 276 RKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKRTLNAWV-----------YKDSWF 324

Query: 293 SDHCPISIDY 302
           SDH P+ IDY
Sbjct: 325 SDHAPVIIDY 334


>gi|59802302|ref|YP_209014.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA 1090]
 gi|194099736|ref|YP_002002871.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae NCCP11945]
 gi|240013129|ref|ZP_04720042.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae DGI18]
 gi|240015572|ref|ZP_04722112.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA6140]
 gi|240120200|ref|ZP_04733162.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID24-1]
 gi|254492721|ref|ZP_05105892.1| nuclease [Neisseria gonorrhoeae 1291]
 gi|59719197|gb|AAW90602.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA 1090]
 gi|193935026|gb|ACF30850.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae NCCP11945]
 gi|226511761|gb|EEH61106.1| nuclease [Neisseria gonorrhoeae 1291]
          Length = 259

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEA-DLS 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +                 ++ +AV  K           +G          R
Sbjct: 46  ADMKNPHGMHGYWHCA-------EKRGYSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFGRLGVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|294782305|ref|ZP_06747631.1| endonuclease/exonuclease/phosphatase family protein [Fusobacterium
           sp. 1_1_41FAA]
 gi|294480946|gb|EFG28721.1| endonuclease/exonuclease/phosphatase family protein [Fusobacterium
           sp. 1_1_41FAA]
          Length = 286

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 94/308 (30%), Gaps = 39/308 (12%)

Query: 1   MIRKYVLA----LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + +K  L     L+ F +  T S A +  + S+NI  L                  D   
Sbjct: 7   LKKKLSLFIASVLMIFTMFSTISSADEAYIASFNILRLGA-------------AEKDMVQ 53

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIA 115
             +  +    D+V L E+ +   + ++  +       + E  I+     S+    +    
Sbjct: 54  TAKLLQGF--DLVGLVEVINKKGIEELVDELNRQSPNTWEYHISPFGVGSSKYKEYFGYV 111

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
            +K  V+ ++        K S      R       +I      ++ +H            
Sbjct: 112 YKKDKVKFIKSEGFYKDGKSSL----LREPYGATFKIGNFDFTLVLVHTIYG-------- 159

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                    + +   + D+   K +     +IAGDFN       +    +K  D     I
Sbjct: 160 NNESQRKAENFKMVDVYDYFQDKDKKENDILIAGDFNL-YALDESFRPMYKHRDKITYAI 218

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
               +         N       D F   Q         S   + ++E D +   + +SDH
Sbjct: 219 DPAIKTTIGTKGRANSY-----DNFFFSQKYTTEFTGSS-GALDFSEKDPQLMRQIISDH 272

Query: 296 CPISIDYD 303
            P+ I  +
Sbjct: 273 IPVFIVVE 280


>gi|311740203|ref|ZP_07714035.1| extracellular nuclease [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311304758|gb|EFQ80829.1| extracellular nuclease [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 924

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 93/340 (27%), Gaps = 68/340 (20%)

Query: 22  QKVRLVSWNINTLSE---------------------QEGVSLWKNSVKRTTSDYTLLRQY 60
            +  + ++N+                            G +    +          +   
Sbjct: 489 GEYTIGAFNVLNYFTSLGEEFGGSAYTDREGNKVTVNRGKTRGAYTQSALEDQERKIVAA 548

Query: 61  AKNLDADIVFLQEMGS------------------YNAVAKVFPKNTWCIFYSTERLINHS 102
              LDAD++ L E+                       + +    + W    S  +     
Sbjct: 549 INGLDADVIGLSEIEDGYAVTGNFAQRDKALKHLTEKLNEAAGSDKWAFVPSPSQDAVPD 608

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
              S + I TA    K  V+ + +S      + + +           ++   +    +  
Sbjct: 609 ---SPDVIRTAFIYHKDVVKPVGESRIFQDDRFTGTAREPLAQEFQPLKEGEESFVAVAN 665

Query: 163 HLKSFC----FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINY 217
           H KS            +    + ++ + QAQ + D + ++++    P    GDFN   + 
Sbjct: 666 HFKSKGSVAKGDADSGDGQGNNPNVRNAQAQAVLDALHKQEDWKDKPLFALGDFNTYTHE 725

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                        +   +   K +     + +       +D+ + ++ A   L       
Sbjct: 726 T-----ALDVFRNDGFTVPAEKYEADP--SYQFSGLLGTLDHVLANKVATGTLDDAQVWN 778

Query: 278 ILYNEDDIKSRGKR--------------LSDHCPISIDYD 303
           I  +E       +R               SDH P+ + + 
Sbjct: 779 INADEPVAFEYSRRNYNIVDFYDDSPFRASDHDPVKVGFT 818


>gi|107101580|ref|ZP_01365498.1| hypothetical protein PaerPA_01002624 [Pseudomonas aeruginosa PACS2]
 gi|116050099|ref|YP_791087.1| hypothetical protein PA14_36680 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218891892|ref|YP_002440759.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58]
 gi|254235182|ref|ZP_04928505.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254240584|ref|ZP_04933906.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296389425|ref|ZP_06878900.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa PAb1]
 gi|115585320|gb|ABJ11335.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126167113|gb|EAZ52624.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126193962|gb|EAZ58025.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218772118|emb|CAW27897.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58]
          Length = 245

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 86/256 (33%), Gaps = 43/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVF-----PKNTWCIFY-STERLINHSKRDSN 107
              LR+  +++ AD+VFLQE+   +++         P   +     S      + +    
Sbjct: 26  LPELREAVRSVGADLVFLQEVLGSHSLHAARLPSWPPAPQYEYLADSMWPQFAYGRNAVY 85

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            + H   AV  K+  +  ++  +  A +       R  +  +++I G+ +  + +HL   
Sbjct: 86  PEGHHGNAVLSKHPILAHRNLDVSVAGN-----EERGLLHAVIDI-GRPLHAVCVHLGLR 139

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         +   +Q Q L + +        P V+AGDFN             + 
Sbjct: 140 -------------EAQRQRQLQLLCELVAG-LPEREPVVVAGDFNDWRQRAD------QL 179

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +        F   +     +       +P+D   +     +     S           + 
Sbjct: 180 LAGCGLREVFVGAQGRPARSFPARWPVLPLDRIYLRNARGRQPRILS-----------RR 228

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P++++ +
Sbjct: 229 PWSHLSDHLPLAVEVE 244


>gi|315037291|ref|YP_004030859.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1112]
 gi|325955769|ref|YP_004286379.1| Exodeoxyribonuclease III [Lactobacillus acidophilus 30SC]
 gi|312275424|gb|ADQ58064.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1112]
 gi|325332334|gb|ADZ06242.1| Exodeoxyribonuclease III [Lactobacillus acidophilus 30SC]
 gi|327182596|gb|AEA31043.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1118]
          Length = 275

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++L+     +  +    R       +     + + DI+ +QE            
Sbjct: 3   LISWNIDSLNAALTGTSARAEETR------QVLDKIHDANPDIIAIQETKLRATGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +      +     +  S  +     +       K     + SYP +G  D+    G    
Sbjct: 57  QTVLAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPKASYPTIGVPDTMDAEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ ++  K +V  ++  +                  ++    L            P 
Sbjct: 114 ---IITLDFDKFFVTQVYTPNSGSGLKRLADRQVWDEKYTEYLHKLDQ--------EKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +        F K      +    
Sbjct: 163 LASGDYNCAHTEIDLKHPENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGDITDVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++       +++    +                DHCPI +
Sbjct: 223 WAQRVRTAKANNSGWRIDYWLVSNRIADKVVRSEMMDTGKRA-----------DHCPILL 271

Query: 301 DYD 303
           + +
Sbjct: 272 EIN 274


>gi|306842863|ref|ZP_07475501.1| exodeoxyribonuclease III (xth) [Brucella sp. BO2]
 gi|306286985|gb|EFM58500.1| exodeoxyribonuclease III (xth) [Brucella sp. BO2]
          Length = 252

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/275 (10%), Positives = 72/275 (26%), Gaps = 56/275 (20%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           + Q+ ++   D++ LQE         AK F    +                S    +  +
Sbjct: 4   VEQFLRDYQPDVLCLQETKCPDDQFPAKGFRALGYEHIA-----------ISGQKGYHGV 52

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A   +      +        D          +  +VE   +K+ + + ++ +    D  +
Sbjct: 53  ATVSRRPLGGVEKVDFCNMGDCRH-------LSAVVEAGDRKLRIHNFYVPAG--GDEPD 103

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--NYLGNNDDFWKTID--- 229
              +P  +      + ++  I  +K+     ++ GD N     N + ++    K +    
Sbjct: 104 PAINPKFAHKLAFLEEMRAIIADRKDECSSLLV-GDLNIAPLENDVWSHKQLLKIVSHTP 162

Query: 230 -----------PNDSLIRFPKEKDSRCNANKNLRNKI----------PIDYFVMDQNAYK 268
                                   +          +            +D+     +   
Sbjct: 163 IETETLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLES 222

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +                    R SDH P+   +D
Sbjct: 223 HIKG-------LQVLRDARGWDRPSDHVPVIATFD 250


>gi|283779701|ref|YP_003370456.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
 gi|283438154|gb|ADB16596.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
          Length = 336

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 97/324 (29%), Gaps = 55/324 (16%)

Query: 21  AQKVRLVSWNINTL-SEQEGVSLWKNSVKR-------TTSDYTLLRQYAKNLDADIVFLQ 72
            +K+ + +WN+     E  G +  K   ++              + +    ++  I+ LQ
Sbjct: 24  PEKLVVATWNLEWFYDEHIGDNYMKLPKEQAAPTRADWDWKLNGIAKAIATINPTIIALQ 83

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ +   +  +  K       +  R+      D   +   AI  +        +      
Sbjct: 84  EIENRRVLFYLTSKLKKDHNLT-YRVAFIEGSDYFTEQDVAILYQSGLTSFSWKEQTKEE 142

Query: 133 AKDSFSRAGNRRAVELLVEING----KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                    N+  +    E       +K+ +L++HL++             +  + ++Q 
Sbjct: 143 FAVQDYYHLNKH-LFAEFEWGPPEDREKLSILNLHLRAAP----------DAADIRTRQG 191

Query: 189 QWLKDWITQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           +  + W+  K  +    +I GD N           + +G           +D        
Sbjct: 192 RLARKWMNDKILAGENVIIMGDLNTNDLWNNLAPDSDIGVIRGLDTPSTDDDLFDTLSAV 251

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNA------------------YKFLIQESFSEILYNE 282
           K+     +   +     D  ++  +                      ++     +  + E
Sbjct: 252 KEENPYTHLIFKQ---FDRILLSPSLTKDAPGKKDLVFKSATIRRDLVVNGKEQDTEHRE 308

Query: 283 DDIK--SRGKRLSDHCPISIDYDF 304
              K     +  SDH P+  +++F
Sbjct: 309 IYWKIAEAERDFSDHYPLVTEFEF 332


>gi|41409338|ref|NP_962174.1| hypothetical protein MAP3240 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398158|gb|AAS05788.1| hypothetical protein MAP_3240 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 260

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 72/308 (23%), Gaps = 82/308 (26%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78
           + +R+ ++NI                     +   LR   + LD D++ LQE+       
Sbjct: 5   KAMRVATFNILHGRTVCDG-----------VNVERLRDCIRRLDPDVLSLQEVDCDQPRS 53

Query: 79  -------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQ 126
                  A A+           +       +   +  D         IA+  +      Q
Sbjct: 54  EHADLTGAAAEAMGAVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQ 113

Query: 127 SYPLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
              L      F                 R AV   +     ++ V + HL      +   
Sbjct: 114 VLRLPRIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANTHLSFVPGWNR-- 171

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                         + L+  I   +    P ++ GD N     +                
Sbjct: 172 --------------RQLRRLIRDLRGLPGPRLLTGDLNMTPQTVRRWSGMRAL------- 210

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                                 +D+ +   +            +             +SD
Sbjct: 211 --------GNAKTFPADNPNRQLDHIL-TDDRRLRCAAVQADLMP------------ISD 249

Query: 295 HCPISIDY 302
           H P+ +D 
Sbjct: 250 HRPLVVDL 257


>gi|323344424|ref|ZP_08084649.1| exodeoxyribonuclease III [Prevotella oralis ATCC 33269]
 gi|323094551|gb|EFZ37127.1| exodeoxyribonuclease III [Prevotella oralis ATCC 33269]
          Length = 249

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 82/302 (27%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L    G     +                K+LDAD   LQE     A    
Sbjct: 1   MKLISWNVNGLRACVGKDFETS---------------FKSLDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N +  +++           ++   ++  A+  K   +       +   D   R    
Sbjct: 45  LAFNGYQSYWN----------YADKKGYSGTAIFTKQTPLNVTYGMGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +                        L        ++  
Sbjct: 91  -----VITLETENFFLVTVYTPNSQDELRRLEYRMRWEDDFKAYLLAL--------DARK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
           P ++ GD N     +   +      +                   I   +          
Sbjct: 138 PVIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKMTELLAGGFIDTFRTLYPEQVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ +   + +        +Y            SDHCPI +
Sbjct: 198 WWSYRFRARERNTGWRIDYFLISERLKERIADAKIHTDIY-----------GSDHCPIEL 246

Query: 301 DY 302
           D 
Sbjct: 247 DL 248


>gi|255011457|ref|ZP_05283583.1| hypothetical protein Bfra3_20100 [Bacteroides fragilis 3_1_12]
 gi|313149275|ref|ZP_07811468.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138042|gb|EFR55402.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 365

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 88/308 (28%), Gaps = 64/308 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      ++L+S+NI +    +  +               +  Y KN  ADIV +QE  
Sbjct: 93  PSGQPENSIKLLSYNIMSFGNMKKENGQNP-----------ILNYIKNSKADIVCMQEYA 141

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                                    H K+       + IA   K   +  +        +
Sbjct: 142 GSETAKIHLNNKEIRQALKDYPYR-HIKQVGKTGAGSQIACYSKFPILSARMLDYQSNYN 200

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKS-----------------------FCFLDS 172
                    ++   ++I    + +++ HL+S                          +  
Sbjct: 201 --------GSMVYDIKIGKDTVLLINNHLESNKLTREDKVVYEDMLKDPKAGKVKSGIRQ 252

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
           L N  + + ++ S QA+ +   I +        ++ GDFN        +    + +D   
Sbjct: 253 LVNKLAEASAIRSAQARAIAQEIARSPYPS--VIVCGDFNDSPISYA-HRVISQDLDD-- 307

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               F +       +    +    ID  ++ +N          +     +D         
Sbjct: 308 ---AFTESGRGLGISYNQNKFYFRIDNILISKNL----KASGCTVDNSIKD--------- 351

Query: 293 SDHCPISI 300
           SDH PI  
Sbjct: 352 SDHYPIWC 359


>gi|163796022|ref|ZP_02189985.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199]
 gi|159178777|gb|EDP63315.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199]
          Length = 248

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 79/282 (28%), Gaps = 56/282 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82
           +R+ S+NI            K+           +      LDAD+V LQE+     A A 
Sbjct: 2   LRVASYNI-----------CKSVGTDLRRRPDRVLAVLGELDADVVALQEVDRRFGARAS 50

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V   ++     S + +    + DS      A+ + +    +  +   L            
Sbjct: 51  VLSPDSIVAETSFKPVRFGVRPDSLGWHGNALLIGRDVEVLSHRRLELPS-------FEP 103

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+   + + G  I V             L            +QA+ +   +    E  
Sbjct: 104 RGAILADLRVRGTAIRV-------------LGMHLGLLGLWRRRQARAVLMTLEA-LEEP 149

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYFV 261
           +P V+ GD N               +      +       +    +  + R    +D  +
Sbjct: 150 LPTVMMGDLNEWT------------LGGGCLAMFAKHHHVAVPGQSFHSRRPIATLDRII 197

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   +                ++ +  SDH P+     
Sbjct: 198 TS--LDLRVEDAGVHV--------SAKSRVASDHLPVWASIT 229


>gi|330874571|gb|EGH08720.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 291

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   +       D D+V L
Sbjct: 30  PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHVGRAGNLQKIGDLIN--DFDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFVNQVEHLAQLGGFPFWYQQLNRNLGRFAQHSNGVLSRLRPTRIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAHPI--------------SDHLPVAVEI 271


>gi|125542548|gb|EAY88687.1| hypothetical protein OsI_10162 [Oryza sativa Indica Group]
          Length = 607

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 85/346 (24%), Gaps = 65/346 (18%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77
               ++S+NI  +T +  +  S               L +      ADI+ LQE+ S   
Sbjct: 254 GTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQNLLREIIGYHADIICLQEVQSNHF 313

Query: 78  -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----LG 132
               A    K+ +   +       ++    + D       R K   V +           
Sbjct: 314 EEFFAPELDKHGYQALFKKRTTEVYTGNLQSIDGCATFFRRDKFSHVKKYEVEFNKAAQS 373

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLD------------IHLKSFCFLDSLENTYSPS 180
             D+   A  R+     +  +   +  +                +  C  ++  N +   
Sbjct: 374 LTDAIIPAAQRKVALTRLIKDNIALIAVLEAKFGSHGADNPSKRQLLCVANTHINVHQDL 433

Query: 181 CSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNN------------------ 221
             +   Q   L   + +    + +P ++ GDFN       +                   
Sbjct: 434 KDVKLWQVNTLLKGLEKIAVSADIPMLVCGDFNATPGSTPHGLLAMGKVDLMHPDLAIDP 493

Query: 222 ------------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                                          D      R     +     N        I
Sbjct: 494 LGILRPASKLTHQLPLVSAYSSFARMVGAGYDLEHQRRRMDPATNEPLFTNCTRDFTGTI 553

Query: 258 DYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           DY     +      + E   E    +D      +  SDH  +  ++
Sbjct: 554 DYIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 599


>gi|71905765|ref|YP_283352.1| AP endonuclease [Dechloromonas aromatica RCB]
 gi|71845386|gb|AAZ44882.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Dechloromonas aromatica RCB]
          Length = 259

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 89/309 (28%), Gaps = 80/309 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           +R++S N+N +      ++                 +    +AD++ LQE+ +   +   
Sbjct: 2   LRIISLNLNGIRSAWSKNVLP---------------WVAAQNADVICLQELKAQLPDLTP 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++   +    FY       +S           I  R+K  RV++      G       A 
Sbjct: 47  EMMAPDGMQAFYHCAEKKGYSG--------VGIWSREKPDRVIE------GFDGGEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++L S       +        +   Q   L+         
Sbjct: 93  GRY-----IRADFGNLSVISLYLPSGSSSPERQEAKFRFLDVFFPQMLALRA-------E 140

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               V+ GD+N                             +  +    +  + +      
Sbjct: 141 GREIVLCGDWNIAHQAIDLKNWKSNQKNSGFLPEERAWLSRLFEEQGWVDVYRRLHPETT 200

Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +A      N+           IDY +         +Q               + +R SDH
Sbjct: 201 DACYTWWSNRGQAWAKNVGWRIDYQIATPGIAVMAVQAEV-----------YKDERFSDH 249

Query: 296 CPISIDYDF 304
            P+ IDYDF
Sbjct: 250 APLIIDYDF 258


>gi|332670340|ref|YP_004453348.1| endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484]
 gi|332339378|gb|AEE45961.1| Endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484]
          Length = 255

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 77/305 (25%), Gaps = 80/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +RL ++NI                     D        + LDAD++ LQE+         
Sbjct: 1   MRLATFNILHGRSTVDG----------EVDLDRFGAAVRALDADVLALQEVDRDQPRSHG 50

Query: 79  -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI----HTAIAVRKKNVRVLQQSYP 129
                  A                        + +         IA+  ++     +   
Sbjct: 51  ADLTVVAADAMGAPHHRFVAVLHGEPGLWTAATGDHQPATASYGIALLSRHPVREWRVLT 110

Query: 130 LLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           L   +                R   R A+  +VE     + V+  HL      +      
Sbjct: 111 LPTLRRRTPVRWPGQRWPTLVRDEPRAALAAVVEGPSGTLTVVATHLTFIPGWN------ 164

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                      + L+  ++Q +    P V+ GD N               ++        
Sbjct: 165 ----------VRQLRHLVSQVRPLPRPLVLTGDLN---------------LEAERPQRVT 199

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                +  +     +    +D+ + D               +  +   ++    LSDH  
Sbjct: 200 GMRPLATADTYPVAQPVKQLDHVLADGP-------------VRADGRGRAVDTGLSDHRA 246

Query: 298 ISIDY 302
           + +D 
Sbjct: 247 LVVDL 251


>gi|313159826|gb|EFR59182.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 326

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/329 (13%), Positives = 87/329 (26%), Gaps = 49/329 (14%)

Query: 7   LALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           L ++     C      +  +RL+ WNI                     +YT    +    
Sbjct: 13  LFILTLFPGCAQRQTDEANLRLLYWNIQNGMWSGQG-----------DNYTRFVNWVSAQ 61

Query: 65  DADIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           + D+    E  +     +  K+ P+  +   +  E    +         H     R    
Sbjct: 62  NPDVCVWCESVTNYKTASDEKIKPEEAYLPEHWGELARRYGHEYWYKGGH-----RDNFP 116

Query: 122 RVLQQSYPLLGAKDSFSRAG----NRRAVELLVEINGKKIWVL--DIHLKSFCFLDSLEN 175
           +V+   YP+               +  A    +  NG  + ++      + + F  + + 
Sbjct: 117 QVITSKYPIENVARLIGAVPDSIVSHGAGWAQIRKNGHTVNIVSLHTWPQVYGFGLADKL 176

Query: 176 TY------SPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDF--- 224
                            + +++ +             +++ GDFN K         F   
Sbjct: 177 ERKASAAAREGDRFRRMEIEYVCNHTIGSVAGAEKQLWMMMGDFNSKSRVDNYEYGFPED 236

Query: 225 ------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                    I  +   +     K            +  IDY    +  Y  ++       
Sbjct: 237 TTAFLVHDYICQHTPYVDVIAAKYPGEFQTTT-GRRFRIDYVYCTRPLYDRIVSARVVSD 295

Query: 279 LYNEDDI----KSRGKRLSDHCPISIDYD 303
            Y                SDH PI ID+D
Sbjct: 296 EYTTPVRDPQELRNFWHPSDHRPIIIDFD 324


>gi|228918521|ref|ZP_04081964.1| hypothetical protein bthur0012_56580 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228841137|gb|EEM86336.1| hypothetical protein bthur0012_56580 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 342

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 96/338 (28%), Gaps = 56/338 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++R  ++N+    E        NS             +++   ++  D++  QE+ S NA
Sbjct: 2   QIRFGTFNLYQFVEPPYKWYEPNSFYSDADWLKKKEWIKKQILDMKCDVIGFQEVFSTNA 61

Query: 80  VAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD--- 135
           +  +  +  +  F +    + + ++         AIA +   + V     P    ++   
Sbjct: 62  LKNLVEEVGFTHFTTVESPVTDINEPLVFIKPVVAIASKYPILSVSPVEIPDSIIEEVLL 121

Query: 136 SFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSF-------CFLDSLENTYS--------- 178
             +   +R  ++  + I+  + +     HLKS         F  S               
Sbjct: 122 GKTFKFSRIPIKAKIRIDSSRDVICYVSHLKSKKPAVKDIVFNPSETWDKQILENLRARS 181

Query: 179 ----PSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDF-------- 224
                S      +A  L   I++   +    P ++ GD N   + +              
Sbjct: 182 MGHVASLLQRGTEAAILYREISETLHNHKEFPIILLGDLNDDEHSIPIEALTNREKLLKI 241

Query: 225 ---------WKTIDPNDSLIRFP----KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                     K I        F     +    R   +   +    +D+  +     +   
Sbjct: 242 GDKIIPEEEQKIIYDYKLYDAFDLAPNQSGQKRLPTHYYGKLGNVLDFIFVSNALNEKNE 301

Query: 272 QESFSEILYNEDDIK-----SRGKRLSDHCPISIDYDF 304
           +       Y   D          K  SDH  +     F
Sbjct: 302 EYIGRVSEYKVFDRHLKCDDIENKTQSDHAQVVATIKF 339


>gi|317124663|ref|YP_004098775.1| endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
 gi|315588751|gb|ADU48048.1| Endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
          Length = 805

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 89/344 (25%), Gaps = 61/344 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWK------------------NSVKRTTSDYTLL 57
               V  ++R+   N+            +                  +            
Sbjct: 456 AVPEVGGRIRVAGMNVLNYFNTWDGRPDRVNNCTGGVGGASMDCRGADDAFEFERQAAKT 515

Query: 58  RQYAKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHSKR------DS 106
            +    +DA +V + E+ +      +A+A +  +        T   ++  +R        
Sbjct: 516 VEAILGMDAAVVGVIEIENDGYGPDSALADLVNRLNAEAGAGTWAYVDVDERTAQLNALG 575

Query: 107 NNDIHTAIAVRKKNVR-----VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
            + I      ++  V       +  +   +   DS  R     A   + +  G     + 
Sbjct: 576 TDAIKVGAIYQRDLVVPMGDTAVLNTEAFVTGGDSEERNRPALAQAFVEKSTGGSFVAVV 635

Query: 162 IHLKSF---CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKIN 216
            HLKS    C   +  +       +  + A  L DW+       S    +I GD N    
Sbjct: 636 NHLKSKGSACDSPAENDGQGNCNDVRVRAAGLLTDWLAADPTGTSEKDVLILGDLNSYAM 695

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                     T+          K       +         +D+ +   +    +   +  
Sbjct: 696 EDPI-----TTLREAGYTNLVRKYGGEAAYSYVFDGQWGYLDHALATASLAPQVTGVAEW 750

Query: 277 EILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303
            +  +E  +                      R SDH P+ +  D
Sbjct: 751 HVNADEPSVLDYNTDFKSAAQIGYLYAPDQFRNSDHDPVVVGLD 794


>gi|198276076|ref|ZP_03208607.1| hypothetical protein BACPLE_02261 [Bacteroides plebeius DSM 17135]
 gi|198270888|gb|EDY95158.1| hypothetical protein BACPLE_02261 [Bacteroides plebeius DSM 17135]
          Length = 349

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/352 (10%), Positives = 86/352 (24%), Gaps = 60/352 (17%)

Query: 1   MIRKYVLALVFFLVPCTAS--VAQKVRL---VSWNINTLSEQEGVSLWKN---------- 45
           M ++ ++  +F     T S     ++ +     +N+  L +       K           
Sbjct: 4   MNKRLLIFTLFITCIYTTSLFAQDRLGVYAAAFYNLENLWDTVDDPNNKGDDDFTPEGQY 63

Query: 46  --SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96
             +  +       + +    L  D       I+ + E+ +   +  +             
Sbjct: 64  EWTQTKYEQKLQNIAKVISQLGRDYCPAGPAIIGISEVENRKVLEDLTKTAP---ISGMG 120

Query: 97  RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
             I H +   +  I  A     K  +++          D       R  + +   + G+ 
Sbjct: 121 YEIVHFESPDHRGIDVAALYNPKLFKLIDARTYPFNKPD-MPNYKTRDILLVSGILAGEP 179

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
             ++  H  S     +       + S++      +       +      +I GD N    
Sbjct: 180 FHLIVNHWPSRYGGSASSPLREFAASIVKHIGDSIHA-----QNPEAKVLIVGDLNDDPF 234

Query: 217 YLGNNDDFW-----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-- 269
               ++        K + P+       K  D    +          D  ++  N      
Sbjct: 235 NKSCSEVLGAKKNIKEVKPDGYYNATWKLYDQGIGSLCYQNQWNLFDQQIISGNLIGKDR 294

Query: 270 -----------------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                              +  +           +     SDH P      +
Sbjct: 295 STLKFWKSEVFNRPFLLQKEGKYKGYPLRTFSGTTFQNGFSDHLP---TLTY 343


>gi|90580850|ref|ZP_01236652.1| hypothetical extracellular nuclease [Vibrio angustum S14]
 gi|90437921|gb|EAS63110.1| hypothetical extracellular nuclease [Vibrio angustum S14]
          Length = 777

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/383 (12%), Positives = 98/383 (25%), Gaps = 105/383 (27%)

Query: 24  VRLVSWNINTLSE---QEGVSLWKNSVKRTTSDYTL------------------LRQYAK 62
           +++ S+N+          G SL      +  +D                     +     
Sbjct: 298 LKVASFNVLNFFTSHSDIGGSLNPTCKDQADADAAKGCNRGAKTAAEFELQRTKIVNALT 357

Query: 63  NLDADIVFLQEMGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNN 108
            +DADI+ + EM +      +A+  +  +         + +      ++  N  +   ++
Sbjct: 358 AMDADIIGIMEMENNGFGKNSAIQNLVDELNLHFNDSSDHYQFVEINDKDKNKGQFFGSD 417

Query: 109 DIHTAIAVRKKN--VRVLQQSYPLLGAKDSFSRAG---------NRRAVELLVEINGKK- 156
            I  A+  R          Q   +     S + A           R  +     ING K 
Sbjct: 418 AIMVAMLYRPSKVTPIKDAQVIRMPSQHMSATNAKGESVKIDAYQRDTLLQQFAINGAKK 477

Query: 157 ---IWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQ----------AQWLKDWITQKKESL 202
              + ++  HLKS                +  + Q          A  L D +       
Sbjct: 478 KSQLTIVVNHLKSKGSGCYEDWLNEQKDKNYQNIQGNCNDFRVSAAMVLADKLKTMSGD- 536

Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPN-------------DSL 234
              ++ GD N                              I                  +
Sbjct: 537 --VLVMGDMNAYGMEDPIRVLTQYKPKQYQRKIMSASGTFIGDQSLHPEGIAASKGLGLV 594

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
               K   +   +         +D+ +  ++  K +       I   E+ +     +   
Sbjct: 595 NLATKWHGADSYSYSYDGELGSLDHALASRSLLKKVRGIEDWHINSVENSLFEYSSKYSG 654

Query: 292 ----------LSDHCPISIDYDF 304
                      SDH P+ I++ +
Sbjct: 655 DLVKSTGPYSASDHDPVIINFAY 677


>gi|223278420|ref|NP_001138591.1| DNA-(apurinic or apyrimidinic site) lyase [Canis lupus familiaris]
          Length = 318

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 74/311 (23%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TAPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                      K    +         +    S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE------NKLPAELQELPGLPHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDTFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|23465951|ref|NP_696554.1| exodeoxyribonuclease [Bifidobacterium longum NCC2705]
 gi|322689435|ref|YP_004209169.1| exodeoxyribonuclease [Bifidobacterium longum subsp. infantis 157F]
 gi|322691402|ref|YP_004220972.1| exodeoxyribonuclease [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|23326663|gb|AAN25190.1| possible exodeoxyribonuclease [Bifidobacterium longum NCC2705]
 gi|320456258|dbj|BAJ66880.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|320460771|dbj|BAJ71391.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 286

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 79/311 (25%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81
            + + + N+N +                 +    +  +A     D+  +QE+ +    V 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCMQEVRAPQEDVD 46

Query: 82  KVFPKNTWCIFYSTERLINHS----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +    + +                     + +        ++      ++D  
Sbjct: 47  SIFGEFGFEYATAGKIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPGLSEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  I V  +++ +    DS +         L      + +   +
Sbjct: 107 S---GRWIETDVKTPQGYTITVACVYVHAGNTDDSTKMEQK--YRFLDTMLTRMGELRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +D  + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +       +   +  D   +   R 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYELRW 274

Query: 293 SDHCPISIDYD 303
           SDH P++I YD
Sbjct: 275 SDHAPLTITYD 285


>gi|317011660|gb|ADU85407.1| exodeoxyribonuclease III [Helicobacter pylori SouthAfrica7]
          Length = 250

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DADI  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADIFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  N          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLNYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                     + +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|261879847|ref|ZP_06006274.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bergensis DSM 17361]
 gi|270333506|gb|EFA44292.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bergensis DSM 17361]
          Length = 321

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/333 (12%), Positives = 90/333 (27%), Gaps = 57/333 (17%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYT 55
           + L+ FL+           +V  N   L +    SL ++           +  R      
Sbjct: 1   MYLITFLLSV-------FTVVELNCENLFDTVDDSLKQDEEFLPGSGRHWTPYRYWVKQN 53

Query: 56  LLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
            + Q   +           D+V L E+ + + V  +  ++             +   DS 
Sbjct: 54  RIGQEILSCGMLDSMEVIPDLVALTEVENDSVVHDLTKRS-----LLKNAGYEYVVTDSP 108

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKS 166
           +     +A+          S   +           R  +       +G  + V  +H  S
Sbjct: 109 DQRGIDVALLYLPSSFRLLSSRSIRIPPFRHFRPTRDILCASGATASGDTLHVFVVHAPS 168

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDF 224
               +     Y          A+ L   I   +   +    ++ GDFN            
Sbjct: 169 RSAGEKATRPY------RMHVARQLYGAIDSLRALYAQPGIIVMGDFNDYTGNASIQFLL 222

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY---- 280
              +     +    +         +   +   +D+ + D++    +++ S ++  +    
Sbjct: 223 SGGLRD---VSAEARGGHGAKGTYRYHSDWGSLDHILCDEHTAACVVKCSINDAPFLLEN 279

Query: 281 ----------NEDDIKSRGKRLSDHCPISIDYD 303
                                 SDH P+   +D
Sbjct: 280 EQKYGGVKPRRTYLGPRYLGGFSDHLPLVAVFD 312


>gi|226509154|ref|NP_001146094.1| hypothetical protein LOC100279626 [Zea mays]
 gi|219885683|gb|ACL53216.1| unknown [Zea mays]
          Length = 605

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 92/345 (26%), Gaps = 64/345 (18%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77
               ++S+NI  +  +  +  S               L +      ADI+ LQE+     
Sbjct: 253 GTFTVLSYNILADAYATTDAYSYCPTWALTWNYRRQNLLREIIGYHADIICLQEVQVNHF 312

Query: 78  -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +  +    K+ +   Y       +S      D       R K   V +       A  S
Sbjct: 313 EDFFSPELDKHGYQALYKKRTTEVYSGNPMAIDGCATFFRRDKFSHVKKYEVEFNKAAQS 372

Query: 137 FSR-----AGNRRAVELLVEINGKKIWVLDIHLKS-----------FCFLDSLENTYSPS 180
            +      A  R A+  L++ N   I VL+    +            C  ++  N +   
Sbjct: 373 LTDAIIPAAQKRVALSRLIKDNIALIAVLEAKFGNHGAENPGKRQLLCVANTHINVHQDL 432

Query: 181 CSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGN------------------- 220
             +   +   L   + +    + +P ++ GDFN       +                   
Sbjct: 433 KDVKLWEVHTLLKGLEKIAVSADIPMLVCGDFNSTPGSSPHALLAMGKVDQHHPDLAIDP 492

Query: 221 -------------------NDDFWKTID---PNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                                 F + +      +   R     +     N        ID
Sbjct: 493 LGILRPPSKLNHQLPLVSAYSAFARMVGVGYDLEHQRRTDPATNEPLFTNCTRDFTGTID 552

Query: 259 YFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y      +     + E   E    +D      +  SDH  +  ++
Sbjct: 553 YIFYTADSLTVDSLLELLDEESLRKDTALPSPEWSSDHIALLAEF 597


>gi|325838966|ref|ZP_08166749.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
 gi|325490621|gb|EGC92933.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
          Length = 254

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 78/285 (27%), Gaps = 36/285 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++V++N+             + +    +  + +    K+   D++  QE+ +  ++ 
Sbjct: 3   NELKIVTFNLR--------ITVDDGLNVWENRVSHVVHKIKSEAPDLIGFQEL-TEISLR 53

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  + T  +F    R    S        +                 P            
Sbjct: 54  DLKRQLTDYVFVGCGRDEQMSGEMVMIAYNKNKLDLMSLDIFWFSDTPYKPGSKKEMMTL 113

Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R     + +  +  +   V +               +  S   +    Q L D   +++
Sbjct: 114 ARPCNVAVFKNQLTNQIFRVYNT-----------HYDHMQSSIRVQSSEQLLNDLHLREQ 162

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
              +P +I GD N +             I   + L                 + KI IDY
Sbjct: 163 NISLPTLIMGDMNSEPQDEEIKAIVNNEIIELNDLTDKLDYTFHD-----YGKIKIKIDY 217

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               ++                       G  LSDH P+ +   F
Sbjct: 218 IFATKSVNASKAVAWADCF---------DGVYLSDHYPVMVRVTF 253


>gi|303248033|ref|ZP_07334299.1| exodeoxyribonuclease III [Desulfovibrio fructosovorans JJ]
 gi|302490590|gb|EFL50495.1| exodeoxyribonuclease III [Desulfovibrio fructosovorans JJ]
          Length = 254

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 73/304 (24%), Gaps = 80/304 (26%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWN+N L      + W                +     AD+V +QE          F 
Sbjct: 3   LMSWNVNGLRAVVQKNFW---------------DWLSGCGADVVGIQESKIQPGHEADFG 47

Query: 86  KNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +   +S+          +    ++ +    +           L   D       R 
Sbjct: 48  GTEVYRTVWSS---------ATVKKGYSGVGCFYRVEPHDIS----LELPDEAYVGEGRL 94

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +++     +  +++  +                     A+ L+           P
Sbjct: 95  -----IQMEFDDFYFFNVYFPNGGRGPDRLAYKFGYYDAFLAHAETLRR--------KKP 141

Query: 205 FVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            V+ GDFN                             + I      +   +  +      
Sbjct: 142 IVVCGDFNTAHTALDLKNAKSNEKTSGFLPEERAWLDRFI--AAGYVDTFRMFEPEGGHY 199

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     + +                    SDHCP+ 
Sbjct: 200 TWWDYRFKARDRNVGWRIDYFFVSEELRGKVRRAWI-----------DSAVMGSDHCPVG 248

Query: 300 IDYD 303
           +D D
Sbjct: 249 LDLD 252


>gi|303276925|ref|XP_003057756.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460413|gb|EEH57707.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 600

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/354 (12%), Positives = 93/354 (26%), Gaps = 68/354 (19%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
               K  ++++N+  +  +  E      +           + +     DADI+ LQE+ S
Sbjct: 242 PDGGKFTVLTYNVLADLYATSELYHYTPSWALSWNYRRQNILKEIVMHDADILCLQEVQS 301

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV--------RVLQQSY 128
            +       +     + S  +            +    A+  K           V     
Sbjct: 302 DHFEDFFQGELGKHGYTSVYKKKTTQVFSQGTYVIDGCAIFFKKDRFQLIKKYEVEFNKA 361

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-----------CFLDSLENTY 177
            L   +     +  + A+  L++ N   I VL+    +            C  ++  +  
Sbjct: 362 ALSLVESLGGSSQKKDALNRLMKDNVALIVVLEALEANGQQAPAGKRQLLCVANTHIHAN 421

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDS--- 233
           +    +   Q   L   + +   S   P V+ GDFN       +N      +D       
Sbjct: 422 TELNDVKLWQVHTLLKGLEKIAASAEIPMVVCGDFNSTPGSAAHNLLTGGRVDAAHPELA 481

Query: 234 -------------------LIRFPKEKDSRC----------------------NANKNLR 252
                              +  +       C                        N    
Sbjct: 482 TDPFGILRPPSKLQHPLPLVSAYTALTKQPCLESEAAERQRSRVDGAGTGEPIFTNCTRE 541

Query: 253 NKIPIDYFVMDQNAYKF--LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               +DY     +      L++      + ++       +  SDH P+  ++ +
Sbjct: 542 FFGALDYIFYTDDTLAPLGLLELPAESDVRSKYGGLPNTQSSSDHIPLMAEFQW 595


>gi|320354727|ref|YP_004196066.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032]
 gi|320123229|gb|ADW18775.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032]
          Length = 481

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 78/301 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAK 82
           +L+SWN+N L                             LDADI+ LQE+ +       +
Sbjct: 231 KLISWNVNGLRAVAKNGF---------------LDVLHELDADILALQEIKAHPDQLDDQ 275

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +   + +  F+ + +   ++            AV  K   +      L G +        
Sbjct: 276 LRNVSGYQSFWHSAKKKGYA----------GTAVFSKIPPLRV----LYGMEQPQFDDEG 321

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     ++ +     ++++ +  +                 L      L+        S 
Sbjct: 322 R-----VLTLEYPDFYLINTYSPNAQPELKRLAFKQEFNRTLLAYMDRLR--------SE 368

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNAN 248
              V+ GD N     +   +      +P                  +   ++ +      
Sbjct: 369 KTVVLCGDLNVAHKEIDLANPKANVKNPGFSEQERAWMDELIAAGYVDTFRQFNQEAGQY 428

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++D ++   +++ +                  SDHCP+S
Sbjct: 429 TWWSYRFNARAKNIGWRIDYFIVDGSSRDRVLEAAIH-----------GEITGSDHCPVS 477

Query: 300 I 300
           +
Sbjct: 478 L 478


>gi|15597352|ref|NP_250846.1| hypothetical protein PA2156 [Pseudomonas aeruginosa PAO1]
 gi|9948174|gb|AAG05544.1|AE004642_11 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
          Length = 245

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 86/256 (33%), Gaps = 43/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVF-----PKNTWCIFY-STERLINHSKRDSN 107
              LR+  +++ AD+VFLQE+   +++         P   +     S      + +    
Sbjct: 26  LPELREAVRSVGADLVFLQEVLGSHSLHAARLPSWPPAPQYEYLADSMWPQFAYGRNAVY 85

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            + H   AV  K+  +  ++  +  A +       R  +  +++I G+ +  + +HL   
Sbjct: 86  PEGHHGNAVLSKHPILAHRNLDVSVAGN-----EERGLLHAVIDI-GRPLHAVCVHLGLR 139

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         +   +Q Q L + +        P V+AGDFN             + 
Sbjct: 140 -------------EAQRQRQLQLLCELVAG-LPEREPVVVAGDFNDWRQRAD------RL 179

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +        F   +     +       +P+D   +     +     S           + 
Sbjct: 180 LAGCGLREVFVGAQGRPARSFPARWPVLPLDRIYLRNARGRQPRILS-----------RR 228

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P++++ +
Sbjct: 229 PWSHLSDHLPLAVEVE 244


>gi|310287159|ref|YP_003938417.1| Exodeoxyribonuclease III [Bifidobacterium bifidum S17]
 gi|309251095|gb|ADO52843.1| Exodeoxyribonuclease III [Bifidobacterium bifidum S17]
          Length = 285

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 71/282 (25%), Gaps = 42/282 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIF----YSTERLINHSKRDS 106
           +    +  +A     DI  +QE+ +    +  +F +  +        + +  +       
Sbjct: 15  AKRKGIETWAGEHAPDIWCMQEVRAPQDELNPIFGEFGFEYATAGKIADQSELTAMNEVC 74

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  + +        ++       +D  S    R     +    G  I V  +++ +
Sbjct: 75  RVKGRAGVGLLTDLPVTARRYGLSGLDEDVDS---GRWIEADVTTPQGYGITVACVYVHA 131

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216
               D ++         L      + +   +        V+ GDFN              
Sbjct: 132 GNSDDPVKMAQK--YRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHTPLDIKNAKAN 189

Query: 217 ------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFV 261
                          + +   + +                   +           IDY  
Sbjct: 190 IKHAGFLPAERAYIDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDNNVGWRIDYQF 249

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +       +   +  D   S   R SDH P+++ YD
Sbjct: 250 ATPELAE-------TARGFVIDKAPSYDARWSDHAPLTVTYD 284


>gi|295090629|emb|CBK76736.1| Metal-dependent hydrolase [Clostridium cf. saccharolyticum K10]
          Length = 324

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 77/318 (24%), Gaps = 61/318 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L++ N ++L E++                 +  +       D++ LQE+       + 
Sbjct: 1   MKLLTLNTHSLEEKD-----------YEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEA 49

Query: 84  FPKNTWCIFYSTER-------------------------------LINHSKRDSNNDIHT 112
             +      +                                       S +        
Sbjct: 50  DGEVLKKSGFIPCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFPVFWTWTSAKVGYGKYDE 109

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +A+  +          L   +D  +    R+A+ + + I   +  V  +      + D 
Sbjct: 110 GMALMSRRPIAEVSQLFLTDGRDYNNWK-TRKALAITLNIGKGEEPVSFVTAHMGWWKDE 168

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            E            Q + L  +            + GDFN + +  G   D        D
Sbjct: 169 EEPFSR--------QWERLDAF-ASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWTD 219

Query: 233 SLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMD--QNAYKFLIQESFSEILYNED 283
           +     K              +         IDY       ++     +           
Sbjct: 220 AYRAAGKRDGGITVPGAIDGWREDGEVPGMRIDYIWYGRKHDSGDRKSRGDVLIEEVRTV 279

Query: 284 DIKSRGKRLSDHCPISID 301
              S    +SDH  +  +
Sbjct: 280 FNGSDCPAVSDHFGVLAE 297


>gi|291616783|ref|YP_003519525.1| YbhP [Pantoea ananatis LMG 20103]
 gi|291151813|gb|ADD76397.1| YbhP [Pantoea ananatis LMG 20103]
          Length = 265

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ N +                        LR+  +   ADIV LQE+   + +  
Sbjct: 21  SFKVLTINTHKGFAPFNRRF----------ILPELREAVRATSADIVLLQEVMGTHDIHP 70

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +      Q+  +  A   
Sbjct: 71  LQHENWPNTSHYEFLADTMWNDFAYGRNAVYPEGHHGNAVLSRFPIAEYQNRDVSVAG-- 128

Query: 137 FSRAGNRRAVE--LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              + NR  +   + +      + V+ +HL                 +    Q   L + 
Sbjct: 129 ---SENRGMLHCQITLPAPYGTLHVICVHLGLK-------------AAHRRAQMTMLNEM 172

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +        P V+AGDFN               +        F  +              
Sbjct: 173 VLA-LPPDAPVVVAGDFNDWQGRANKILQKGAGLKE-----VFSIKHGRPARTFPARFPL 226

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +               + +     +     LSDH P++++ 
Sbjct: 227 LRLDRIYVRNA-----------TVSHPWALPRKPWSHLSDHAPLAVEI 263


>gi|167767320|ref|ZP_02439373.1| hypothetical protein CLOSS21_01839 [Clostridium sp. SS2/1]
 gi|167711295|gb|EDS21874.1| hypothetical protein CLOSS21_01839 [Clostridium sp. SS2/1]
 gi|291559374|emb|CBL38174.1| exodeoxyribonuclease III [butyrate-producing bacterium SSC/2]
          Length = 250

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 79/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                         +    DADI  +QE          
Sbjct: 1   MKFISWNVNGIRACVKKGF---------------LDFFNETDADIFCIQESKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S         T I  +++ + V        G          R
Sbjct: 45  LNLPGYHQYWNYAVKKGYSG--------TGIFTKEEPISV------FYGLGIEEHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  K  + + ++  +     +  +             + L++          
Sbjct: 91  -----VITLEFKDYYFITVYTPNSQSELARLSYRMKWEEDFLAYLKKLEE--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N  +                      +  +TI  N  +  F      +    
Sbjct: 138 PVIFCGDLNVAVEEIDLKNPKTNRKNAGFTDEEREKMRTILSNGFIDTFRYLYPDQTGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ +     +                      SDHCPI 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSECLKDRISDAKILT-----------DVMGSDHCPIE 246

Query: 300 IDY 302
           +D+
Sbjct: 247 LDF 249


>gi|14861060|dbj|BAB62089.1| deoxyribonuclease I precursor [Cynops pyrrhogaster]
          Length = 354

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 88/306 (28%), Gaps = 29/306 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +      ++  +       +   ++ S+NI   S          S    T     L Q  
Sbjct: 1   MTPATFWVLLLVATSFYCTSHAFKVASFNIARFSM---------SKVTDTVVRDRLVQIL 51

Query: 62  KNLDADIVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           +  +  ++ +QE+ S    A+  +  + +         L++     S      A   R+ 
Sbjct: 52  RRYE--LISIQEVMSAENEAIISLVRELSQATGLPYNVLVSDHLGRSTYREKYAYVYRED 109

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            ++  +  +   G ++  +    R             +  L +         ++    + 
Sbjct: 110 ILKPTEWYHYDDGCENCGTDVFMREPFVARFSSLTTVVKDLALVSIHTSPDYAVREVDAL 169

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                  Q + L              +I GD+N    Y+ N       +     L     
Sbjct: 170 FDVWEDVQQRLL----------TQNILILGDYNADCKYVTNKHWPTIRLRHEPQLHWLIS 219

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKR--LSDHC 296
           + +    +          D FV         +  E+ +   Y+E    +  +   +SDH 
Sbjct: 220 DDEDTTVSTNTH---CAYDRFVASGVEMLNAIFPETATAFNYHEAYGLTYEEAKDVSDHY 276

Query: 297 PISIDY 302
           P+ +  
Sbjct: 277 PVEMQL 282


>gi|295425010|ref|ZP_06817719.1| exodeoxyribonuclease III [Lactobacillus amylolyticus DSM 11664]
 gi|295065328|gb|EFG56227.1| exodeoxyribonuclease III [Lactobacillus amylolyticus DSM 11664]
          Length = 275

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +    R       + +   +   D++ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGQSTRALETR------KILERLHDEAPDVLAIQETKLPATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +   +    S  +     +       K    L+ SYP +GA +     G  
Sbjct: 55  KHQTILKEMFPEYKYFWRSSEEPARKGYAGTMYLYKKGLELKASYPKIGAPEPMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                   +  Q L        +   
Sbjct: 114 -----IITLEFPTFFVTQVYTPNSGNGLKRLADRQVWDQRYIEYLQQL--------DKQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                   +       +  +        F K   +     
Sbjct: 161 PVLASGDFNCAHTPIDLKHPENNHHSAGFTDEERKDFTQLLDAGFTDSFRKINGNVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +                DHCPI
Sbjct: 221 SWWAQRVRTAKANNSGWRIDYWLTSNRIADKIRRSEMIDTGKRA-----------DHCPI 269

Query: 299 SIDYD 303
            +D D
Sbjct: 270 LLDID 274


>gi|261362100|gb|ACX71483.1| sphingomyelinase [Bacillus mycoides]
          Length = 244

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 83/218 (38%), Gaps = 21/218 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTNQNNTLKVMTHNVYMLSTS----LYPNWGQNERADLIGAADYMK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             NA  ++           T         E         S+      +A+  K   + + 
Sbjct: 83  DNNASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIIEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   V+ N + + V+  HL++    D++    SP+ S+ ++
Sbjct: 143 QY-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTK 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223
           Q Q ++++I  +   +    +I GD N       NN D
Sbjct: 198 QLQEIQEFIKNKNISNNEYVLIGGDMNVNKINAENNSD 235


>gi|256820279|ref|YP_003141558.1| exodeoxyribonuclease III Xth [Capnocytophaga ochracea DSM 7271]
 gi|256581862|gb|ACU92997.1| exodeoxyribonuclease III Xth [Capnocytophaga ochracea DSM 7271]
          Length = 254

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 84/300 (28%), Gaps = 73/300 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                        ++ K+ + D++ LQE+ +       
Sbjct: 1   MKIISYNVNGIRAALTKGF---------------AEWLKSANPDVLCLQEIKATED---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +S           +    ++ +A+  K        +  +G    +     R
Sbjct: 42  ---QIPTEVFSELGYKYQYYHSAEKKGYSGVAILSKIEP----KHVEIGTGIDYMDKEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++  + + + V+ ++L S    D                    K +I + K+ + 
Sbjct: 95  -----VLRADFETLSVMSLYLPSGTNPD--------RLDFKLTFMADFKKYIDKLKQKVP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
             VI GD+N     +  +D                          I   +      +   
Sbjct: 142 NLVICGDYNICHEAIDIHDPIRNANVSGFLPIEREWLDKFMKSGFIDSFRYFHKEAHQYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++       + +                  + SDHCPI +
Sbjct: 202 WWSYRANARNNNKGWRIDYHLVSAPLENRMERALIL-----------PEAKHSDHCPILL 250


>gi|213021237|ref|NP_001132943.1| DNA-(apurinic or apyrimidinic site) lyase [Sus scrofa]
 gi|210062866|gb|ACJ06403.1| APEX nuclease 1 [Sus scrofa]
          Length = 318

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                      K    +   +     +    S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE------NKLPAELQELSGLPHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SHKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|46200513|gb|AAL73527.2|AF466200_6 putative AP endonuclease [Sorghum bicolor]
          Length = 348

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/336 (10%), Positives = 88/336 (26%), Gaps = 95/336 (28%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              +  + ++WN N+L            + R  SD+    Q    LD D++ +Q      
Sbjct: 44  PAEEPRKFLTWNANSL------------LLRMKSDWPAFSQLVARLDPDVICVQ------ 85

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            V +    + +  +     L +           TA+ ++KK             +    +
Sbjct: 86  VVLRALSTSPFKDYRVWWSLSDSKYAG------TAMFIKKKFEPKKVSFNLDRTSSKHET 139

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                     ++    +   +L+ +  +     +       S     +  + + +++   
Sbjct: 140 DGR-------VIIAEFESFLLLNTYAPN-----NGWKEEENSFQRRRKWDKRMLEFVQHV 187

Query: 199 KESLVPFVIAGDFNRKINY-------------------------------LGNNDDFWKT 227
                P +  GD N                                          F   
Sbjct: 188 ---DKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYTPPNQEDCGQPGFTPAERRRFGNI 244

Query: 228 IDPNDSLIRFPKEKDS--------------------RCNANKNLRNKIPIDYFVMDQNAY 267
           +     +  +                             +++    ++ IDYF++ +   
Sbjct: 245 LFQGKLVDAYRHLHKEKDMDGGFSWSGHPIGNEINFSAYSSRYRGKRMRIDYFLVSEQLK 304

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ++           D     G   SDHCP++++  
Sbjct: 305 DRIVSCEMHGRGIELD-----GFYGSDHCPVTLELS 335


>gi|330792503|ref|XP_003284328.1| hypothetical protein DICPUDRAFT_75271 [Dictyostelium purpureum]
 gi|325085781|gb|EGC39182.1| hypothetical protein DICPUDRAFT_75271 [Dictyostelium purpureum]
          Length = 294

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 80/313 (25%), Gaps = 57/313 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ S+NI   +  +  + W            L+      L   I+  QE      N + 
Sbjct: 6   LRVCSYNIRYDNIDDKQNQWVYRKM-------LVFSNIAFLKPHIIGFQECLFNQINDLK 58

Query: 82  KVFP---KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +         +            +   S    +T       + +      P      S+ 
Sbjct: 59  EGLLEKFGMNYDYIGLGRDDGEKNGEFSPIFYNTDKVELVHSHQFWISETPYKPGTKSWK 118

Query: 139 RAGNRRAVE--LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            A  R         + + K  + L+ HL                      +   +     
Sbjct: 119 TACPRIVTWGLFKFKKSNKLFYFLNTHLDHLS-------------ESARYEGTLMIKSFI 165

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-------------------------NDDFWKTIDPN 231
              +  +P V+ GDFN                                 +D  ++T+  N
Sbjct: 166 ATLKPQIPLVLVGDFNSNEYQKPIINIVSSSIDIIKSKKYLELLEIPLRDDILFQTLF-N 224

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +   K          N +    IDY  ++Q         SF     +   I      
Sbjct: 225 ARNVANCKIGPDHTFTGFNGQFTENIDYIFINQQF----KTTSFIVFNNHPSKITKSSTI 280

Query: 292 LSDHCPISIDYDF 304
            SDH PI  D  F
Sbjct: 281 ASDHFPIIADLQF 293


>gi|317497391|ref|ZP_07955713.1| exodeoxyribonuclease III [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895311|gb|EFV17471.1| exodeoxyribonuclease III [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 250

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 79/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                         +    DADI  +QE          
Sbjct: 1   MKFISWNVNGIRACVKKGF---------------LDFFNETDADIFCIQESKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S         T I  +++ + V        G          R
Sbjct: 45  LNLPEYHQYWNYAVKKGYSG--------TGIFTKEEPISV------FYGLGIEEHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  K  + + ++  +     +  +             + L++          
Sbjct: 91  -----VITLEFKDYYFITVYTPNSQSELARLSYRMKWEEDFLAYLKKLEE--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N  +                      +  +TI  N  +  F      +    
Sbjct: 138 PVIFCGDLNVAVEEIDLKNPKTNRKNAGFTDEEREKMRTILNNGFIDTFRYLYPDQTGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ +     +                      SDHCPI 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSECLKDRISDAKILT-----------DVMGSDHCPIE 246

Query: 300 IDY 302
           +D+
Sbjct: 247 LDF 249


>gi|302039598|ref|YP_003799920.1| exodeoxyribonuclease III [Candidatus Nitrospira defluvii]
 gi|300607662|emb|CBK43995.1| Exodeoxyribonuclease III [Candidatus Nitrospira defluvii]
          Length = 257

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/306 (10%), Positives = 76/306 (24%), Gaps = 76/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N+L                     ++ Q+ +    D++ LQE    ++    
Sbjct: 1   MKIATFNVNSL----------------RKRLPIVLQWLERHQPDVLCLQETKVQDS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +         +  +A+  +            G  D   R   R
Sbjct: 41  ------EFPLTALATSGYEITFRGMKAYNGVAILSRTKPEAIS----YGFDDGGEREEAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++     + I +++ ++     +DS +  Y             L+           
Sbjct: 91  LLRVVI-----QGIPIINTYVPQGFEIDSPKYQYK------LGWYDRLRKHFETHLSPKE 139

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P +  GD N                    +    + + KT+                   
Sbjct: 140 PAIWCGDMNVAPRPIDVHSPEKHLKHVCYHEDARNAYGKTV--AWGFEDVFCRLYPDRQQ 197

Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            ID+ +      +            + D    R    SDH  
Sbjct: 198 FTFFDYRAPSALAANKGWRIDHILATPPLAQRC-------RRVDVDLEPRRATDPSDHTV 250

Query: 298 ISIDYD 303
           +  ++ 
Sbjct: 251 LWAEFS 256


>gi|325846697|ref|ZP_08169612.1| exodeoxyribonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481455|gb|EGC84496.1| exodeoxyribonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 275

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 84/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWNI++L+        +  + R       +       DADI+ LQE          
Sbjct: 1   MKIISWNIDSLNAALTSDSNRAKMSRD------VLDTIIKEDADIICLQETKLPRTGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K     ++        S ++     +       K       SYP L A D+  +    
Sbjct: 55  KHKQILESYFPQYNYAWISSQEPARKSYAGCLTFYKKEFEPIISYPTLDAPDTMDQE--- 111

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  + +E +    ++  ++  +     S  +         +   + L            
Sbjct: 112 -ARIITLEFDN--FYLTQVYTPNAGSGLSRLDLRQVWDKKYANYLEKLDQ--------NK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                           +  +     +  F           
Sbjct: 161 PVIACGDFNVAHKEIDLKHPENNHKSAGFTDEERSGFTNLLNKGFVDTFRYLHGDVEGKY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++     + + +    +    +           DH PI
Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFIVSDRIKEKIKESDMIDSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            I+ D
Sbjct: 270 YINID 274


>gi|265750587|ref|ZP_06086650.1| predicted protein [Bacteroides sp. 3_1_33FAA]
 gi|263237483|gb|EEZ22933.1| predicted protein [Bacteroides sp. 3_1_33FAA]
          Length = 334

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 78/280 (27%), Gaps = 56/280 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + +++LV WN       +                T      + L   IV LQE    N +
Sbjct: 93  SNQLKLVCWNTEGFRLNKDT-------------LTKAAHSIRVLQPGIVCLQERPHTNLL 139

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A       W    +      +   +S  D    +AV  +      Q Y    + +     
Sbjct: 140 A-------WDTIRAAFPDYPYCIINSREDEVLNLAVFSRWPIGNVQEYYFPNSYNK---- 188

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-----LSQQAQWLKDWI 195
                ++  +++ G+   + ++HL++    +S                 ++QA  L   I
Sbjct: 189 ----ILQADIQMTGQTFRLFNVHLQTTGMNESYSMKDRFQAMRHHTVQRNRQADLLTKAI 244

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            +   S  P ++ GDFN             + +               +C         +
Sbjct: 245 AE---SPYPVIVCGDFNDTPASYAYRK-ISRLLQDCFLQAGQTWSGSYQCWGGF-----L 295

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            IDY                    +  +         SDH
Sbjct: 296 RIDYTFCSPA--------------FQVNRYLLISNPWSDH 321


>gi|254796778|ref|YP_003081615.1| exodeoxyribonuclease III [Neorickettsia risticii str. Illinois]
 gi|254590017|gb|ACT69379.1| exodeoxyribonuclease III [Neorickettsia risticii str. Illinois]
          Length = 260

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 79/305 (25%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                        +     + D D++ LQE+    +    
Sbjct: 2   LKVATWNVN----------------SIRQRAEAVSALLVSEDLDVLLLQELKCQES---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          ++++        +  +A+  +           +  +  +      
Sbjct: 42  ------DFPLHVFHDLSYNVILKCQKGYNGVAIASRLPITKISDEIYMDGEARY------ 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             VE ++    K I ++ +++ +     S    Y        Q    L   I     +  
Sbjct: 90  --VEGVISFFDKCIRLISVYVPNAQAAGSPRFEYK------MQFHDALARRIHCYLLNNN 141

Query: 204 PFVIAG-DFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
             ++ G D N     +   D                  + +        F + K      
Sbjct: 142 DIILLGGDMNAAPEDIDVYDHVKLDGCTGFHIEERSKLRELLNLGLFDTF-RMKYPTKQE 200

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +         + ID+ +        L+     + L +         R SDH P+
Sbjct: 201 FSWWDYRGGGLQRNEGMRIDHILASAEGMDHLLDCYILKELRHIA-------RPSDHVPV 253

Query: 299 SIDYD 303
               +
Sbjct: 254 VCVLN 258


>gi|169345728|ref|ZP_02865687.1| exodeoxyribonuclease III [Clostridium perfringens C str. JGS1495]
 gi|169297128|gb|EDS79244.1| exodeoxyribonuclease III [Clostridium perfringens C str. JGS1495]
          Length = 250

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 74/299 (24%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         Y K+ DADI  LQE          
Sbjct: 1   MKLISWNVNGLRACVKKGF---------------LDYFKSEDADIFCLQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +        G          R
Sbjct: 45  LDLEGYFQYWNYAEKKGY----------SGTAIFTKKEPLNV----YYGINMEHHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +     +                  L         S  
Sbjct: 91  -----VITLEFEDFFMVTVYTPNSQSELARLEYRMEWEDDFRNYLLEL--------SSKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N                         D + T+  +  +  F           
Sbjct: 138 GVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKFSTLLSSGFIDTFRYFNPDLEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +           IDYF++  N    + +      +             SDHCP+
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEAFIDTEIL-----------GSDHCPV 245


>gi|47210833|emb|CAF93174.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 288

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 89/307 (28%), Gaps = 38/307 (12%)

Query: 2   IRKYV-LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           ++ ++ L + FF     A  A   R+ ++N+++  E         +  + +S    L Q 
Sbjct: 1   MKSFICLVIFFFAGLGHAYGASHFRICAFNLHSFGE---------AKAKKSSVMRTLTQI 51

Query: 61  AKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAV 116
                 D+  LQE+      A++++  +          + +      R  +         
Sbjct: 52  IARC--DVTLLQEVRDRKERALSELLERLNRFQAEHRYQAVASQRLGRSDSYQEQYVFVY 109

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           R     V    Y     +     A  R    +        I    +  +     ++    
Sbjct: 110 RADTATVTGH-YQSPDNRPGDVDAFAREPFVVRFRAPKTAIKEFVLIPQHTAPANT---- 164

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            S     L    Q ++     ++ S                     +  + I   +    
Sbjct: 165 -SKELDALYDVLQDVRKMWKTEETSTQTV---------PTMAKRKREKLQLITDKNLHWL 214

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--S 293
              E D+   A+ +       D  V+  Q     ++  S     +  +   +  + L  S
Sbjct: 215 IADETDTTVRASTSCSY----DRIVVHGQRFASAVVPSSAKAFNFQMEYGLTEEQALEVS 270

Query: 294 DHCPISI 300
           DH P+ +
Sbjct: 271 DHYPVEV 277


>gi|67904338|ref|XP_682425.1| hypothetical protein AN9156.2 [Aspergillus nidulans FGSC A4]
 gi|40742799|gb|EAA61989.1| hypothetical protein AN9156.2 [Aspergillus nidulans FGSC A4]
 gi|259485420|tpe|CBF82427.1| TPA: endonuclease/exonuclease/phosphatase family protein
           (AFU_orthologue; AFUA_3G09210) [Aspergillus nidulans
           FGSC A4]
          Length = 600

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 78/328 (23%), Gaps = 67/328 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
           + + + S+N+  L+                 +   +  +  N      I+ LQE+     
Sbjct: 291 EALAIGSYNVENLTPTSD-------------NIEAIADHIANYLNGPAIMCLQEIQDNTG 337

Query: 80  VAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                                      +  F     +      +   +I  A       V
Sbjct: 338 ATDDGVVDANVTLSTLAELISAAGGPDYD-FTEIAPIDGEDGGEPGGNIRVAYLYDPTIV 396

Query: 122 RV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLD 161
           ++                    +  P L    + +   +R+ +    E        + ++
Sbjct: 397 QLHNPNPGTSTDANEVQSGPELKYNPGLIDPTNEAWEASRKPLVAAWETVDGKNTFYTIN 456

Query: 162 IHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKI 215
           +H  S      L+    P         + QA+ +  +IT   E       +  GDFN   
Sbjct: 457 VHFTSKGGGSYLQGDERPPVNGGVEQRTAQAEVVASFITSILEEDASAKILTTGDFNEFT 516

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                             L                  N   +D+  + +   +    E  
Sbjct: 517 FAAPLKTFVSA--SGLQDLDEVVGVDPLERYTYIYDSNHEQLDHMFVSEALAEGARMEHV 574

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  +   +     SDH P     +
Sbjct: 575 HV-----NTWVNYDDAPSDHDPSVAVLN 597


>gi|298674416|ref|YP_003726166.1| deoxyribonuclease I [Methanohalobium evestigatum Z-7303]
 gi|298287404|gb|ADI73370.1| Deoxyribonuclease I [Methanohalobium evestigatum Z-7303]
          Length = 447

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 78/285 (27%), Gaps = 34/285 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YN 78
           +  +R+ ++NI              S          + +  +N   DI+ +QE+     N
Sbjct: 59  SDTLRIGAFNIQVFGT---------SKASEPETMNTIAKIIRNY--DIIAIQEIRDKSEN 107

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           ++ ++        +     +     R  + + +   A       V   + P    +   +
Sbjct: 108 SLPQLVELVNEGDYNYDFVMSERLGRTVSKEQY---AYIYNTATVDISNNPHTYPEPEGT 164

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +R+      E          I + +               +        + ++  +K
Sbjct: 165 DPFHRQPYIASFEAVNGNFDATFITVHTDP----------DEATEEINALDSVVEYTHEK 214

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                 F++ GD N   +Y     D   T+  +        + D+   +          D
Sbjct: 215 YSEERDFIVMGDLNADGSYFDE--DLDSTMHNDYYYWCIGDDIDTTTGSTDY-----TYD 267

Query: 259 YFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ++       F             D        +SDH P+   +
Sbjct: 268 RIIITEPAMEDFTDDAHIYRYDDKYDLKHDETMDVSDHYPVYATF 312


>gi|237710997|ref|ZP_04541478.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229454841|gb|EEO60562.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 334

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 78/280 (27%), Gaps = 56/280 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + +++LV WN       +                T      + L   IV LQE    N +
Sbjct: 93  SNQLKLVCWNTEGFRLNKDT-------------LTKAAHSIRVLQPGIVCLQERPHTNLL 139

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A       W    +      +   +S  D    +AV  +      Q Y    + +     
Sbjct: 140 A-------WDTIRAAFPDYPYCIINSREDEVLNLAVFSRWPIGNVQEYYFPNSYNK---- 188

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-----LSQQAQWLKDWI 195
                ++  +++ G+   + ++HL++    +S                 ++QA  L   I
Sbjct: 189 ----ILQADIQMTGQTFRLFNVHLQTTGMNESYSMKDRFQAMRHHTVQRNRQADLLTKAI 244

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            +   S  P ++ GDFN             + +               +C         +
Sbjct: 245 AE---SPYPVIVCGDFNDTPASYAYRK-ISRLLQDCFLQAGQTWSGSYQCWGGF-----L 295

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            IDY                    +  +         SDH
Sbjct: 296 RIDYTFCSPA--------------FQVNRYLLISNPWSDH 321


>gi|28867571|ref|NP_790190.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213971019|ref|ZP_03399140.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301385582|ref|ZP_07234000.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058834|ref|ZP_07250375.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132137|ref|ZP_07258127.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28850806|gb|AAO53885.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213924255|gb|EEB57829.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 291

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   +       D D+V L
Sbjct: 30  PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHVGRAGNLQKIGDLIN--DFDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFVNQVEHLAQLGGFPFWYQQLNRNLGRFAQHSNGVLSRLRPTKIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAHPI--------------SDHLPVAVEI 271


>gi|27379180|ref|NP_770709.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110]
 gi|27352331|dbj|BAC49334.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110]
          Length = 256

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 79/302 (26%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                     L  + +    D+V LQE+ + +     
Sbjct: 1   MKIATFNINNIN----------------RRLPNLLAWMRAAKPDVVALQELKASDG---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  ++   +     L G  D       R
Sbjct: 41  ------EFPAAAIEKAGYGAVWRGQKTWNGVAILARDAEPILTRDRLPGGSD---DHEAR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + I V  I+L +       +  Y             LK       +  +
Sbjct: 92  YIEAAV-----RGIIVTSIYLPNGNPQPGPKFDYKLD------WFARLKRHAKTFIKQDL 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGD+N     +                     + ++          +    +    
Sbjct: 141 PVVLAGDYNVAPTAIDIYPTRSWDKDALIQPKSRAAFASLVAQGWGDAIRELHPDKRIYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+ ++       L +    + +  ED         SDH P  I
Sbjct: 201 FWDYKRNRWPRDAGLRLDHLLLSPALISRLAKAGVDKKVRGED-------GASDHAPAWI 253

Query: 301 DY 302
             
Sbjct: 254 VL 255


>gi|157825475|ref|YP_001493195.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford]
 gi|157799433|gb|ABV74687.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford]
          Length = 277

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 78/306 (25%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+       DI+ LQE    +++   
Sbjct: 1   MKIVTWNINSL----------------RLRIDLLRKLVYEHQPDIILLQETKVSDSL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       S    +  +A+  K       S  L  +         R
Sbjct: 42  ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +I     +V           D  +   +       +  + +++W+T  +    
Sbjct: 89  HIAAIVNDIEIHNFYV-------PAGGDIPDIDANLKFKHKLEYVRLMQEWLTTNRTRND 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N   +                         +  +    +             
Sbjct: 142 KIIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNSLSFIDSSRYFVPLDEKF 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L          +         + SDH P
Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSNNLKDAL-------FSMHLLSEARDWLQPSDHVP 254

Query: 298 ISIDYD 303
             +  D
Sbjct: 255 YFVTLD 260


>gi|110639788|ref|YP_679998.1| endonuclease/exonuclease/phosphatase family protein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110282469|gb|ABG60655.1| endonuclease/exonuclease/phosphatase family protein [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 339

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 85/304 (27%), Gaps = 42/304 (13%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
                +     ++ ++S+NI   +     +    S  R       +  + K  +AD++ L
Sbjct: 66  VTFSGSEEQQAELSVLSYNIRLFNVYPQYADKTFSSSR------KIIDFIKKSEADVLCL 119

Query: 72  QEMGSY------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           QE  +       N + ++  K  +  F  T +    +           I  R K V   +
Sbjct: 120 QEFYNDPKDTLFNTIHRIRKKYKYYYFSETYKNRAGASFGMIIFSKYPIKNRGKVVFHER 179

Query: 126 QSYPLLGAKDSFSRAGNRR--AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            +   + A         R        + IN K+I   +   KS   + +    +      
Sbjct: 180 SNNQTIYADVLLPNKTVRIYNMHLQSMSINDKEIAESNFDTKSKTNVLNAFTKFKKGTIN 239

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKE 240
            S Q   L   I     S    ++ GD N            D      +   + +     
Sbjct: 240 RSIQVDTLVGHIKA---SPYKVIVCGDLNDPPYSYTYETLSDQLNNAFEEKGNGLGITFN 296

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + ID    DQ+            I +      +      DH P+  
Sbjct: 297 GRLPF---------LRIDQQFCDQD---------IEVIRFETQHNITYT----DHFPVKA 334

Query: 301 DYDF 304
            Y F
Sbjct: 335 GYVF 338


>gi|163802759|ref|ZP_02196649.1| tryptophanyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173466|gb|EDP58288.1| tryptophanyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 975

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/378 (10%), Positives = 91/378 (24%), Gaps = 96/378 (25%)

Query: 20  VAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVF 70
               +R+ S+N+        +          R  +           +      +DADI+ 
Sbjct: 471 ADSDLRIASFNVLNYFTSVADSGHENPTGQNRGATHLDEFLIQQAKIVAAMNKMDADIIG 530

Query: 71  LQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L E+ +      +AV  +           ++ +      ++    ++   ++ I  AI  
Sbjct: 531 LMEVENNGFGDTSAVKNLVDALNAEIDEVEDHYTYVEIEDQDKYQNQYLGSDAIMVAILY 590

Query: 117 RKK--------NVRVLQQSYPLLGA--------KDSFSRAGNRRAVELLVEIN--GKKIW 158
           R           V    + +              +       R ++     +   GK + 
Sbjct: 591 RADAVTPKEAAKVIATPEQHIEENTITRNNGAEGNPAYDKYQRHSLLQTFTVKETGKDLS 650

Query: 159 VLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           V+  H KS                   +      +     A  + D +   +      ++
Sbjct: 651 VVVNHFKSKGSECIEEWVAGVEDSEPADLQGNCNNFRVSAANVVGDALKSIEGD---VLV 707

Query: 208 AGDFNRKINYLG---------------NNDDFWKTIDPN-------------DSLIRFPK 239
            GD N                           +  +D                       
Sbjct: 708 VGDLNAYGMEDPLLTLTDYSKEKYGRDIYTAAYTNVDGGEIQVDKSKIDKGYGYYNLNTL 767

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------- 291
              +   +         +D+ +      + ++      I   E ++     +        
Sbjct: 768 LHGADTFSYTYSGELGNLDHALASNGLAQKVVAIEDWHINSLESNLFEYSSKYTGDMPKY 827

Query: 292 -----LSDHCPISIDYDF 304
                 SDH P+ I  DF
Sbjct: 828 QDAFSASDHDPVIIAIDF 845


>gi|219884049|gb|ACL52399.1| unknown [Zea mays]
          Length = 493

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 91/313 (29%), Gaps = 70/313 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +   + ++++SWN+N L        +             ++Q A+  D D++ LQE 
Sbjct: 224 PPLSKDTRALKIMSWNVNGLKALLKSRGF------------SVQQLAQREDFDVLCLQET 271

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +V        + ++           +   ++  A+  +   +  +    +   
Sbjct: 272 KMQEKDIEVIKDTLLDGYTNSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGISDH 326

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
           D+  R         +V +     ++L  ++ +    L  L    +     L    + L+ 
Sbjct: 327 DTEGR---------VVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKELEK 377

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFP 238
                     P ++ GD N     +  +D                           +   
Sbjct: 378 --------SKPVILTGDLNCAHQEIDIHDPAGDRRSAGFTNEERESFGTNFLSKGFVDTF 429

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +++     A      +           +DYF++ ++  + +            D      
Sbjct: 430 RKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSESITEKVH-----------DSYILPD 478

Query: 290 KRLSDHCPISIDY 302
              SDH P+ +  
Sbjct: 479 ISASDHSPLGLVL 491


>gi|213961670|ref|ZP_03389936.1| exodeoxyribonuclease III [Capnocytophaga sputigena Capno]
 gi|213955459|gb|EEB66775.1| exodeoxyribonuclease III [Capnocytophaga sputigena Capno]
          Length = 254

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 86/302 (28%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                         + K+ + D++ LQE+       K 
Sbjct: 1   MKIISYNVNGIRAALTKGF---------------ADWLKSANPDVLCLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++           +    ++ +A+  K        +  +G    +     R
Sbjct: 39  LEDQIPTEIFTELGYTYQYYHSAEKKGYSGVAILSKIAP----KHVEVGTGIDYMDKEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++  + + + V+ ++L S   +D                    + +I + K+++ 
Sbjct: 95  -----VLRADFETLSVMSLYLPSGTNID--------RLDFKLTFMADFQKYIDKLKQTVP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
             VI GD+N     +  +D                          I   +      +   
Sbjct: 142 NLVICGDYNICHEAIDIHDPVRNATVSGFLPVEREWLDKFMKSGFIDSFRYFHKEPHQYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++       + +                  + SDHCPI +
Sbjct: 202 WWSYRANARNNNKGWRIDYHLVSTPLENRMERALIL-----------PEAKHSDHCPIVL 250

Query: 301 DY 302
           + 
Sbjct: 251 EI 252


>gi|310790394|gb|EFQ25927.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 307

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 76/324 (23%), Gaps = 41/324 (12%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK---------RTT 51
           M  K +L          +  +  +R++S+NI   +                      R  
Sbjct: 1   MQLKTLLVPFVLAEAVLS-QSVPIRIMSFNIRYATSSLESGEKPWWDLFCGITKSRCRQR 59

Query: 52  SDYTLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSN 107
                +   A    A    IV LQE  +           + W            +   S 
Sbjct: 60  YVLEAISDAANAAPAGAAVIVGLQEALNNQKDDIQNGLGDGWSHLGVGRDDGKKAGEFSV 119

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLK 165
                                P +     +     R     + E    GK+    + HL 
Sbjct: 120 IFYRNDALRLLYQETKWLSPTPDV-VSYGWGAGSRRIVTIGVFEHIATGKRFIHANTHL- 177

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDD 223
                       + S    S+  + +   I   + +  P    + GDFN   N       
Sbjct: 178 -----------DNVSDQARSEGIKVVVSRIQAVQSTYGPLGVTLTGDFNSDPNGSAYRVL 226

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                  +           +      +     +   ID+  +   +      +       
Sbjct: 227 ANGGFVEDLYNKAPRVGSLTGTYTTFDTSLQNSASRIDFIWLGPQSANKYSVQKIEIKS- 285

Query: 281 NEDDIKSRGKRLSDHCPIS--IDY 302
                 + G  +SDH P+   +  
Sbjct: 286 ----NIASGVVISDHRPVVGDVTL 305


>gi|298370237|ref|ZP_06981553.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281697|gb|EFI23186.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314]
          Length = 258

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 80/306 (26%), Gaps = 76/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 47  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRAP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  K+ V+ ++L S       +        L  +        +   K    
Sbjct: 95  F-----VRCDFGKLSVISLYLPSGTSAPERQ-------ELKYRFLDAFYPMLEAMKAEGR 142

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+ GD+N                         +   + I        +          
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGRVIRDLGWTDMWRTLYPDNP-G 201

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY ++        +                + ++ SDH P+
Sbjct: 202 YTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPL 250

Query: 299 SIDYDF 304
            ++YD+
Sbjct: 251 VVEYDY 256


>gi|302868995|ref|YP_003837632.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|315504534|ref|YP_004083421.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|302571854|gb|ADL48056.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|315411153|gb|ADU09270.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 232

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 83/280 (29%), Gaps = 59/280 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+VS+NI+                    D   L +  +    D+V +QE        +
Sbjct: 7   PLRVVSYNIH----------------SQRDDTAALAEVVRTAAPDVVIVQE-----GPRR 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +        +  ++  +    +       ++R + V    Q YPL   +        
Sbjct: 46  FRWRQKTAALAESFGMVVAAGGLPSLGNVLLTSLRLRVVDTSCQRYPLTPGRHM------ 99

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A      + G  + +   HL             S   +    QA   K  +     S 
Sbjct: 100 RGAAYAHCRVGGVDVLLAGSHL-------------STDPAERPAQAAAFKREL---AAST 143

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P V   D N   +        W+T+              +  +       +  ID   +
Sbjct: 144 LPVVAGADINEGPDGP-----AWQTL-AEGLTDTALAADRADRHTFSCADPRRRIDALFV 197

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D            + + Y+  D  +  +R SDH P+ +D 
Sbjct: 198 DPR---------ITVVDYDVVDTPA-ARRASDHFPVLVDL 227


>gi|255530789|ref|YP_003091161.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366]
 gi|255343773|gb|ACU03099.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366]
          Length = 264

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +++ S+NIN ++                +    L ++ K    D+V LQE+        A
Sbjct: 1   MKIASYNINGIN----------------ARLDNLLRWLKEARPDVVCLQELKAPDNRFPA 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +   +                    +A+  +   + +    L G  +      
Sbjct: 45  QLLLDAGYHAIWH------------GQKSWNGVAILSRYAEIKETRRGLEGDPEDLHSRY 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +E     + +  ++L +       +  Y           + L     +    
Sbjct: 93  --------IEAFINGVVIGCLYLPNGNPFPGPKFEYK------LNWIKRLTKHAAKLNAF 138

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
            +P  + GD+N     L                     W  +        F K       
Sbjct: 139 GLPVALVGDYNIIPTDLDTYKPEKYLENALFRPEARKLWTALLKQGWTDAFRKLYPKDRI 198

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          +D+F+++      L            D         SDH P+
Sbjct: 199 YTFWDYLRNAYHRDAGLRLDHFLLNDKLVDRLDAAGV-------DKHVRGWDHSSDHAPV 251

Query: 299 SIDY 302
            +  
Sbjct: 252 WVVL 255


>gi|188585577|ref|YP_001917122.1| exodeoxyribonuclease III [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350264|gb|ACB84534.1| exodeoxyribonuclease III [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 251

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y   +  DI  +QE          
Sbjct: 1   MKLISWNVNGLRACLKKGF---------------LEYFNEVSGDIFCVQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +  Q     G  ++      R
Sbjct: 45  LELPGYFQYWNYAEKKGY----------SGTAIFTKIQPLTVQ----YGIGEAKHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     ++++++  +     +  +               L        +S  
Sbjct: 91  -----VITLEFCDYYLVNVYTPNSQRELARLDYRLQWEDAFKNYLVNL--------DSEK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +     +  F         A 
Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKNNKRNAGFTEEERNKLTELLNAGFIDTFRYFYPDTEGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  Q    +L                      SDHCP++
Sbjct: 198 TWWSYITKARERNAGWRIDYFLASQKLDNWLTDAEIH-----------ADIMGSDHCPVA 246

Query: 300 IDY 302
           +  
Sbjct: 247 LKL 249


>gi|109127402|ref|XP_001095110.1| PREDICTED: deoxyribonuclease-1 [Macaca mulatta]
          Length = 282

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 86/283 (30%), Gaps = 30/283 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E               +  + + Q       DI  +QE+   +  AV
Sbjct: 22  SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+          +   +++     ++         R   V V+   Y   G +   +  
Sbjct: 71  GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSVVDSYYYDDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +R    +       ++    I        D++    +     L  Q +W          
Sbjct: 131 FSREPAIVRFSCPFTEVREFAIVPLHAAPEDAVAEIDALYDVYLDVQDKW---------- 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            L   ++ GDFN   +Y+  +      +  + +      +       + +       D  
Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLRTSPTFQWLIPDTADTTATSTHCAY----DRI 236

Query: 261 VMDQNAY-KFLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300
           V+        ++ +S     +      S    + +SDH P+ +
Sbjct: 237 VVAGTLLQDAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 279


>gi|218676698|ref|YP_002395517.1| hypothetical protein VS_II0936 [Vibrio splendidus LGP32]
 gi|218324966|emb|CAV26802.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 347

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/336 (12%), Positives = 90/336 (26%), Gaps = 59/336 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +   ++N+    E            S +        + +  ++LD D++  QE+ S  ++
Sbjct: 7   ITFATFNLLNYLEPPNAYYDFENIYSFEEWQKKQHWMAEAIRSLDCDVIGFQEIFSPKSL 66

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
            ++  K  +  +++     +             IA R     V   +     L       
Sbjct: 67  EQLMNKLGYP-YFAVVDSADVEDDYLYTSPVVGIASRYPIENVQPVTPDSELLSAFNLGD 125

Query: 138 SRAGNRRAVELLVEING---------------------KKIWVLDIHLKSFCFLDSLENT 176
             + NR  V   + +                       + I V +         D+L   
Sbjct: 126 KFSFNRTPVHATITLPHLGSTDCYVVHLKSQRPTEPRIESIDVDNAQQGEKPQSDTLTRF 185

Query: 177 YSP------SCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTI 228
           +        S      +AQ L  +I   + ++  P V+ GDFN+ +          +   
Sbjct: 186 HQEQLGSWLSSVQRGLEAQMLHQYITNHRYQTDQPVVLMGDFNKPLFNDEFKGLLSYSIN 245

Query: 229 DPNDSLIRFPKEKDSRCN-----------------ANKNLRNKIPIDYFVMDQNAYKFLI 271
              +S       +                       +    +   +DY +M         
Sbjct: 246 RDENSKHWLSHFRLKDSWDIYHQLHEQDLLEQRKPTHYYGASGSVLDYILMSNEFDCQNS 305

Query: 272 QESFSEILYNEDD------IKSRGKRLSDHCPISID 301
                   Y   D           +  +DH  +++ 
Sbjct: 306 SSLMEISRYTVLDHHLINPSFEHDQFSTDHAIVAVT 341


>gi|323357077|ref|YP_004223473.1| exonuclease III [Microbacterium testaceum StLB037]
 gi|323273448|dbj|BAJ73593.1| exonuclease III [Microbacterium testaceum StLB037]
          Length = 282

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 86/323 (26%), Gaps = 85/323 (26%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+ VR+VS N+N +                 +    + ++ +   ADIV LQE+ +  A 
Sbjct: 2   ARSVRIVSINVNGIRA---------------AVRKGMVEWLEASGADIVTLQEVRAT-AE 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   W I                      +A+  +   V  +++      D+  R 
Sbjct: 46  QLAEALPGWRIVNDEALQKG----------RAGVAIISRLPGVETRTHLGPEPLDASGRW 95

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +E   +I+G+ + ++  ++ S       ++               ++  +   K 
Sbjct: 96  -----IETDFDIDGETVTIVSAYVHSGEVDTPKQDAK-------WLFLDAMEQRLATLKA 143

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN----------------------------- 231
                ++ GD N     L   +      +                               
Sbjct: 144 ERELALVTGDLNVGHRELDIKNWRGNRKNAGFLPRERAYFDRFFGPAGEQVEGVDGSVGT 203

Query: 232 --DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
               +    +              +           IDY V      +           Y
Sbjct: 204 GLGWVDVGRRRMGEVEGPYTFWSMRGKAFDTDSGWRIDYHVATPALAER-------VTDY 256

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
             D   S   R SDH P+ +DY 
Sbjct: 257 RVDRAPSYDTRWSDHSPVIVDYT 279


>gi|319781575|ref|YP_004141051.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167463|gb|ADV11001.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 300

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 86/316 (27%), Gaps = 60/316 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           ++LVS+NI      +G             D +   +      AD++ LQE+         
Sbjct: 1   MKLVSYNIQYGFGGDGCY-----------DLSRAARIVA--GADVIALQEVERHWQRSNF 47

Query: 75  -GSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                 ++ + P   W     +  +    H  R  N        V  K   V  + + L 
Sbjct: 48  DDQPELLSSLLPDYHWVYGPAFDMDASERHDGRLVNRRRQFGTMVLSKLPIVWSRLHALP 107

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA--- 188
             +          A+E ++      + VL +HL      + LE             +   
Sbjct: 108 MRRTLRPLNTRNAALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHRRAPSDGG 167

Query: 189 -------QWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWK------------T 227
                  +  ++W + + E   P   +  GDFN +                         
Sbjct: 168 PWSGVDDEPTRNWTSGEAEPENPLAAIWMGDFNMEPGSAEYRRIVGSTPYHRGAAYHSGF 227

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +D          +  +          K  +D+  +       +                 
Sbjct: 228 VDAAAVAGEPVPDFHTHVKTIDGRLAKRRLDHCFVGGMFAGRVRSIRADI---------- 277

Query: 288 RGKRLSDHCPISIDYD 303
             +  SDH P+ +D D
Sbjct: 278 -DEVASDHFPLRVDID 292


>gi|301618038|ref|XP_002938432.1| PREDICTED: deoxyribonuclease gamma-like [Xenopus (Silurana)
           tropicalis]
          Length = 269

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 89/286 (31%), Gaps = 33/286 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           +++ S+N           + K S  + ++  T +         DI+ + E+      A  
Sbjct: 1   MKIASFNARRFG------VKKCSDPKVSAVITKIAA-----RYDIIVILEVFDAKEKAAK 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+  +   C       +++                R++ V+V   +Y     +     + 
Sbjct: 50  KLVEQLNSCSDERYNYILSTPLGRKEYKEQYLFVYREEQVKVKD-TYQYEDMQHGDEDSF 108

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R    +  E     +    +        DS             Q+   L D     KE 
Sbjct: 109 AREPFIVRFEAKKSALKDFVLIPIHTTPKDS------------VQEIDELYDVYEHVKEK 156

Query: 202 --LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                 ++ GDFN    Y+ N       +  +  L     +       N    +    D 
Sbjct: 157 WGTENIILLGDFNADGAYVSNKKMKTIRLRTDPDLHWLIDDDTDTTAINTTDFS---YDR 213

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303
            V+  +  K ++  S     + E+   S  + +  SDH P+ ++++
Sbjct: 214 IVVHSSILKHVVPNSAKPFNFQEEYKMSYEEAVAVSDHYPVEVEFN 259


>gi|115450953|ref|NP_001049077.1| Os03g0166800 [Oryza sativa Japonica Group]
 gi|108706369|gb|ABF94164.1| Endonuclease/Exonuclease/phosphatase family protein, expressed
           [Oryza sativa Japonica Group]
 gi|108706370|gb|ABF94165.1| Endonuclease/Exonuclease/phosphatase family protein, expressed
           [Oryza sativa Japonica Group]
 gi|113547548|dbj|BAF10991.1| Os03g0166800 [Oryza sativa Japonica Group]
 gi|125585049|gb|EAZ25713.1| hypothetical protein OsJ_09546 [Oryza sativa Japonica Group]
          Length = 607

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 85/346 (24%), Gaps = 65/346 (18%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77
               ++S+NI  +T +  +  S               L +      ADI+ LQE+ S   
Sbjct: 254 GTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQNLLREIIGYHADIICLQEVQSNHF 313

Query: 78  -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----LG 132
               A    K+ +   +       ++    + D       R K   V +           
Sbjct: 314 EEFFAPELDKHGYQALFKKRTTEVYTGNLQSIDGCATFFRRDKFSHVKKYEVEFNKAAQS 373

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLD------------IHLKSFCFLDSLENTYSPS 180
             D+   A  R+     +  +   +  +                +  C  ++  N +   
Sbjct: 374 LTDAIIPAAQRKVALTRLIKDNIALIAVLEAKFGSHGADNPSKRQLLCVANTHINVHQDL 433

Query: 181 CSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNN------------------ 221
             +   Q   L   + +    + +P ++ GDFN       +                   
Sbjct: 434 KDVKLWQVNTLLKGLEKIAVSADIPMLVCGDFNATPGSTPHGLLAMGKVDLMHPDLAIDP 493

Query: 222 ------------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                                          D      R     +     N        I
Sbjct: 494 LGILRPASKLTHQLPLVSAYSSFARMVGAGYDLEHQRRRMDPATNEPLFTNCTRDFTGTI 553

Query: 258 DYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           DY     +      + E   E    +D      +  SDH  +  ++
Sbjct: 554 DYIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 599


>gi|88803294|ref|ZP_01118820.1| hypothetical protein PI23P_11917 [Polaribacter irgensii 23-P]
 gi|88780860|gb|EAR12039.1| hypothetical protein PI23P_11917 [Polaribacter irgensii 23-P]
          Length = 336

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 97/324 (29%), Gaps = 71/324 (21%)

Query: 1   MIRKYVLALVFFLVP------------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48
           + ++++L+ +  +                +++   ++++S+N+ T          +N+  
Sbjct: 64  LKKQFLLSFLVLIFGWFFASPLYKISENASALNSDLKVMSFNVKTFDFFNNKKKVENTKN 123

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                      +  +   DI+ LQE               + +  +         +  + 
Sbjct: 124 GFE--------FIADQALDILVLQE--------------YYQLKKNKLPYPYRYIKLRSK 161

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
                +A+  K   +   S  L    ++         +   +      I + + H +S  
Sbjct: 162 RSKYGMAIYSKYKIINSGSLDLKSTGNN--------IIFADILKEKDTIRIYNAHFESLK 213

Query: 169 FLDSLENTYSPS--------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
              + EN    +             +QA     ++  +K+     +I GDFN        
Sbjct: 214 IKPNEENFGEENSEKLIGRVAQAFKRQASQTALFLNHEKQWKGKKIICGDFNNTA----- 268

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
               +  I  N                + N    + ID+ + D+ A              
Sbjct: 269 YSWMYHEISKNK--KDAFIVAGEGFGKSYNYWFPLRIDFILTDEAAI------------- 313

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
             +  K+  +  SDH PI  + ++
Sbjct: 314 -INQFKTFTEIYSDHFPIRANINW 336


>gi|291439108|ref|ZP_06578498.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672]
 gi|291342003|gb|EFE68959.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672]
          Length = 273

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 76/309 (24%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + S N+N L                        ++     AD + LQE+         
Sbjct: 9   LTVTSVNVNGLRAAAKKGF---------------VEWLAQTPADALCLQEVRAEPQQLPE 53

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     W + ++           +       +++  +      Q        D   R  
Sbjct: 54  QVREPEGWHVVHAP----------AAAKGRAGVSLYTRREPDRVQVGFGSTEFDGSGR-- 101

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 +  ++ G  + V  ++L S       +              + L++        
Sbjct: 102 -----YVEADLPG--VTVASLYLPSGEVGTERQEEKVRFMGEFLAYLKELRERA---AGE 151

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTI--DPNDSLIRFPKEKDS 243
               V+ GD+N                         +   + +       +    K    
Sbjct: 152 GREVVVCGDWNIAHEKADLKNWRGNTKNSGFLPEEREWLSRVLTPTDGGYVDVVRKLHPD 211

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           IDY +      +  +           +   +  +R SD
Sbjct: 212 VDGPYSWWSYRGRAFDNDTGWRIDYQMATPGLAERAV-------EAYVERAATHAERWSD 264

Query: 295 HCPISIDYD 303
           H P+++ ++
Sbjct: 265 HAPVTVVFE 273


>gi|240127208|ref|ZP_04739869.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035]
 gi|268685568|ref|ZP_06152430.1| exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035]
 gi|268625852|gb|EEZ58252.1| exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035]
          Length = 259

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 47  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFGRLGVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVMHTLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|239930740|ref|ZP_04687693.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672]
          Length = 266

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 76/309 (24%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + S N+N L                        ++     AD + LQE+         
Sbjct: 2   LTVTSVNVNGLRAAAKKGF---------------VEWLAQTPADALCLQEVRAEPQQLPE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     W + ++           +       +++  +      Q        D   R  
Sbjct: 47  QVREPEGWHVVHAP----------AAAKGRAGVSLYTRREPDRVQVGFGSTEFDGSGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 +  ++ G  + V  ++L S       +              + L++        
Sbjct: 95  -----YVEADLPG--VTVASLYLPSGEVGTERQEEKVRFMGEFLAYLKELRERA---AGE 144

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTI--DPNDSLIRFPKEKDS 243
               V+ GD+N                         +   + +       +    K    
Sbjct: 145 GREVVVCGDWNIAHEKADLKNWRGNTKNSGFLPEEREWLSRVLTPTDGGYVDVVRKLHPD 204

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           IDY +      +  +           +   +  +R SD
Sbjct: 205 VDGPYSWWSYRGRAFDNDTGWRIDYQMATPGLAERAV-------EAYVERAATHAERWSD 257

Query: 295 HCPISIDYD 303
           H P+++ ++
Sbjct: 258 HAPVTVVFE 266


>gi|225706090|gb|ACO08891.1| Deoxyribonuclease-1 precursor [Osmerus mordax]
          Length = 287

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 94/308 (30%), Gaps = 30/308 (9%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M  +  L  V  L     ++   +RL ++NI +           +     T+   ++   
Sbjct: 1   MTTRMHLVCVAGLFLALLAMGGSLRLGAFNIKSFG---------DKKASNTTLMDIISTI 51

Query: 61  AKNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                 DI+ +QE+   +  A    +   N     Y  + +++     S          R
Sbjct: 52  VHRY--DIILIQEVRDTDLSATNILMQHVNKGPSPYKYQHIVSEPLGRSTYTERYLYLYR 109

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +  V V +      G +   +    R    ++       +    +  +      +L+   
Sbjct: 110 QDLVSVAKNYTYDDGCEPCGTDTFIREPFVVMFSSKYTAVENFVLIPQHTSPDFALQEVD 169

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           +        + +W          +    ++ GDFN   +Y+ +++     +  + S    
Sbjct: 170 ALYDVAADVRVRW----------NTNDIILLGDFNAGCSYVTSSEWVKIRLFTDKSYHWL 219

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDH 295
             +      +N         D  V   +  + L   S     Y E    S      +SDH
Sbjct: 220 ITDDVDTTVSNTVCPY----DRIVATTDMMRGLATGSARVFNYMEALKLSHSLALGVSDH 275

Query: 296 CPISIDYD 303
            P+ ++  
Sbjct: 276 YPVEVELT 283


>gi|73670429|ref|YP_306444.1| hypothetical protein Mbar_A2969 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397591|gb|AAZ71864.1| hypothetical protein Mbar_A2969 [Methanosarcina barkeri str.
           Fusaro]
          Length = 278

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 82/292 (28%), Gaps = 40/292 (13%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  + +R+ ++NI                         L +  +    DIV +QE+   +
Sbjct: 16  SQEETLRIGAFNIQVFGV---------KKASNPKIMNTLAKVLRTY--DIVAVQEIRDSS 64

Query: 79  -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                A+ KV         Y     +      +++    A       V++  +  P   +
Sbjct: 65  QTALPALIKVVNSERANYSYVVSERLGR----TSSKEQYAYIYDSDRVKLEGE--PYTYS 118

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           K   +   +R+      E   + + ++ I + +     + E                + D
Sbjct: 119 KPEGTDPFHRQPYIATFEDRNETLNLVLITVHTDPDEATEEINS----------LSTVLD 168

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q       FVI GD N   +Y   N                          + N   
Sbjct: 169 STRQTCPVEDNFVIMGDLNADGSYFDENKA---NSLSCGEYCWLIDNSMDTTTGDTNCTY 225

Query: 254 KIPIDYFVMDQNAYKFLIQES-FSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               D  ++ ++   +    S         +        +SDH P+  ++ F
Sbjct: 226 ----DRIIITEDMESYFTGNSGLFRYDLKYNLTSEETNAVSDHYPVYAEFAF 273


>gi|15928480|gb|AAH14718.1| Deoxyribonuclease I [Mus musculus]
          Length = 284

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 86/289 (29%), Gaps = 34/289 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+ ++NI T  E +  +   +             +       DI  +QE+   + V
Sbjct: 20  AGTLRIAAFNIRTFGETKMSNATLSVY---------FVKILSRY--DIAVIQEVRDSHLV 68

Query: 81  A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A  K+  +       +   +++      +         R   V +L       G +   +
Sbjct: 69  AVGKLLDELNRDKPDTYRYVVSEPLGRKSYKEQYLFVYRPDQVSILDSYQYDDGCEPCGN 128

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQ 197
              +R    +       ++    I                 + +    +   L D ++  
Sbjct: 129 DTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEIDALYDVYLDV 176

Query: 198 KKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            ++      +  GDFN   +Y+ ++      +  +        +       + +      
Sbjct: 177 WQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTVTSTHCAY--- 233

Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
            D  V+     +  ++  S     +  +   S    + +SDH P+ +  
Sbjct: 234 -DRIVVAGALLQAAVVPNSAVPFDFQAEYRLSNQLAEAISDHYPVEVTL 281


>gi|317178229|dbj|BAJ56018.1| exodeoxyribonuclease [Helicobacter pylori F16]
          Length = 250

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +        G          R
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVS----YGINMEEHNKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                     + +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|167535651|ref|XP_001749499.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772127|gb|EDQ85784.1| predicted protein [Monosiga brevicollis MX1]
          Length = 989

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 93/308 (30%), Gaps = 50/308 (16%)

Query: 21  AQKVRLVSWNI-------NTLSEQE----GVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           A+ +R++S+N+         L+  E          +        +  ++   +   AD++
Sbjct: 597 AETIRILSYNVLADCYIREDLARPEVRAASFPGKDDQCLLWKHRWPRIQSVVRRSKADVI 656

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+  Y     V+        +    + +  KRD ++ +  A  +R +   V+   + 
Sbjct: 657 CLQEVE-YAMFEHVYCPFMRRQGFDICIMQDAPKRDVSHPVGVATFLRGERFSVVSAQHR 715

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                           + L  ++ G  + V + HL S             + +   +Q +
Sbjct: 716 SRA-----------LLLHLQDQLTGHSVAVGNCHLIS----------KRSAEADRIKQMR 754

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW--KTIDP-----------NDSLIR 236
            +              V+ GDFN               + ++            +  L+ 
Sbjct: 755 NVVRLAEGM--GTTAVVLVGDFNDGDEDPSVAQSLQCVRKLEDPVAAKAMVAAESAQLLL 812

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSD 294
               + S             ID+ ++  N          +   Y           +  SD
Sbjct: 813 HSVYEGSPDVTLCKPGLMARIDHVLVTSNCLVEARHAPQATESYGTLSKHRLPSRRNGSD 872

Query: 295 HCPISIDY 302
           H P+ +D+
Sbjct: 873 HLPVGMDF 880


>gi|25027653|ref|NP_737707.1| hypothetical protein CE1097 [Corynebacterium efficiens YS-314]
 gi|259506945|ref|ZP_05749845.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|23492935|dbj|BAC17907.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259165483|gb|EEW50037.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 292

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 76/282 (26%), Gaps = 37/282 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + +++WNI     +       +   R  +   L+R+    L   I+ +QE        + 
Sbjct: 23  LHVMTWNIR----RRIPGQLTHRADRWATRAPLIREALSQLRPTILGVQEALPEQTAFLQ 78

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V   +    F    R  +H+   +     T         +      P +    S+    
Sbjct: 79  QVLGPS--HRFVGWGRGRHHTGEATPVFYDTTQLELIDWRQQALSDTPEVPGSVSWGNLF 136

Query: 142 NRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R  V         G +  V + HL        L +  +    + + Q            
Sbjct: 137 PRAFVAATFRHRATGTRFLVFNTHLDPLSRRSRLRSARAIRDHIRTTQL----------- 185

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--P 256
               P V+ GD N   N            +    S+       +     N          
Sbjct: 186 ----PAVVTGDVNAHQNSATFRAFTSGNVLTDTWSVAAGHLTAEWGTFPNYRAPRPGGKR 241

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           ID+ +   +         +       +  +  G   SDH  +
Sbjct: 242 IDWILSTPD---------WQVHRAGINARQYAGAWASDHLSV 274


>gi|326433914|gb|EGD79484.1| hypothetical protein PTSG_12983 [Salpingoeca sp. ATCC 50818]
          Length = 504

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/315 (10%), Positives = 76/315 (24%), Gaps = 38/315 (12%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            KV +  +NI  +  + +       +           +     N   DI+ LQE+     
Sbjct: 190 DKVSVFCYNILCDKYASRNMFKYCPSWALAWEYRKGKILTELANSKCDILCLQEVSKSEF 249

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK------------KNVRVLQQS 127
                 +     ++   ++   +   ++  I                       ++   +
Sbjct: 250 YQYFLGQLQKEGYHGAFKVKTRAAYQADETIDGCATFYSTKTYKMLYEHGIDLQQLSVAN 309

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                         +  A+  + E    K  V   +L         +         +   
Sbjct: 310 SNGCNTVIDRCMPKDNVALFTVFEHAVTKKRVFVANLHLTWDPHFSDVK----VVQIVLA 365

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN-------------------NDDFWKTI 228
            + +++++ + K   VP ++ GDFN   +                          F+ ++
Sbjct: 366 LKAIREFLQENKLLDVPVMLMGDFNSMPDSGVYEFLATGKINPNHPDMQGYDYKAFFDSV 425

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKS 287
                              NK       IDY      +     +     E   +      
Sbjct: 426 GTTHPFKLRSAYTTEMQYTNKTAGFVGIIDYIWYTEGSLLPQAVWGPVDESYMDRVSGCP 485

Query: 288 RGKRLSDHCPISIDY 302
                SDH  +    
Sbjct: 486 NPHFSSDHLALGAKL 500


>gi|260433467|ref|ZP_05787438.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417295|gb|EEX10554.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 234

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 83/280 (29%), Gaps = 55/280 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+RL S+NI      +                  + Q    L ADIV LQE        +
Sbjct: 6   KLRLASYNIQKCVGLD-----------LRRQPQRILQVLDRLGADIVVLQEADKR-LPPR 53

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 + +  +  ++++     S      A+  R  ++RV + ++  L           
Sbjct: 54  PAALPHFMLDEAGWKIVDLGGAGSLGWHGNAVIWRGDHIRVRRAAHHDLPG------LEP 107

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV +  + +   + V+ +HL  F              +   QQ   L+     +    
Sbjct: 108 RGAVRVEFDTHIGPLRVMGMHLGLFS-------------AWRRQQILHLRR--DGRALDR 152

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P V AGDFN       +       + P+   +           +    +    +D   +
Sbjct: 153 MPTVWAGDFN-----EWSRQPILDRLAPDMRFL-------PPVPSFPAAQPLGALDRIAL 200

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                  +      SDH P+  D 
Sbjct: 201 GGGLEALAHGV----------HGERPAHIASDHLPVWADL 230


>gi|186474317|ref|YP_001861659.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
 gi|184196649|gb|ACC74613.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
          Length = 308

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 89/304 (29%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L ++NIN                   S    L Q+ +    D+V LQE+ + ++    
Sbjct: 1   MKLATFNING----------------IRSRLPALLQWLEREAPDVVCLQELKAPDS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  K+ + ++    L G  D      +R
Sbjct: 41  ------GFPEAELNRAGYGAIWHGQVSWNGVAILAKDAQPVETRRGLPGDPDDTH---SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + I +  ++L +       +  Y  +        + L  +  +  +S  
Sbjct: 92  YIEAAV-----EGILIGCLYLPNGNPQPGPKFDYKLA------WFERLIVYAKRLLDSGH 140

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+AGD+N         +                 + + +D   +     +  D +   
Sbjct: 141 PVVLAGDYNVVPTDFDIYNPRSWLKDALLQPESRACYARLLDQGWTDALRTRFPDEQIFT 200

Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 +          ID+ ++++     +            D         SDH P  
Sbjct: 201 F-WDYFRQHWERNSGLRIDHLLLNRPVAAMMRDAGV-------DRWVRGEPHASDHAPAW 252

Query: 300 IDYD 303
           ++ D
Sbjct: 253 VELD 256


>gi|116328809|ref|YP_798529.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331719|ref|YP_801437.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121553|gb|ABJ79596.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125408|gb|ABJ76679.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 362

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 91/324 (28%), Gaps = 66/324 (20%)

Query: 20  VAQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
              K++L+ WN+  L+           +        S +        +  Y ++   D++
Sbjct: 48  ADSKIKLLVWNVQYLAGKKRVFWYDLPEGDGPDVGPSREEIEETLKKVTDYIRSESPDVI 107

Query: 70  FLQEMGS-------YNAVAKVFPKNTWCI------FYSTERLINHSKRDSNNDIHTAIAV 116
             QE+          + + ++  +           FY     + H K   +  +  A   
Sbjct: 108 LFQELHDGSKNTFEEDQLERILSQIGPAYMCKSEAFYWKSFFVPHPKIWGSVGMKLATVS 167

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLE 174
           + K    ++ S PL+ A    ++    R  ++  + I  G K  VL+ HL +F       
Sbjct: 168 KYKISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIEGGDKFTVLNTHLDAFSQGTDTM 227

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------------NYL 218
                       Q + +   + +   +   +V+ GDFN                   +  
Sbjct: 228 RR----------QVETIAGLLKELDLAGHYWVLGGDFNLLPPGFDRKLMHPNGAFFYSDE 277

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQE 273
                 +                  +                 IDY     N        
Sbjct: 278 QEIKPLFDRWSSAVPFNILNGVGREKYYTYYPNDPAIGKPDRTIDYIFYSSNL------- 330

Query: 274 SFSEILYNEDDIKSRGKRLSDHCP 297
              +  Y  D  ++    +SDH P
Sbjct: 331 --KQTEYKVDQGETLW-TISDHFP 351


>gi|289766976|ref|ZP_06526354.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289697175|gb|EFD64604.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 294

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 73/285 (25%), Gaps = 61/285 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--- 81
           R+++WN+                    S+              ++ +QE  + +      
Sbjct: 63  RVMTWNLCN--------------PCDASNLDRAAD-IAAHAPQVIGMQEACARDVDRIRD 107

Query: 82  --KVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             + F    + + + S  +  +       N      A+          +           
Sbjct: 108 YLEAFHGLVYHVAHGSVLQNWSRCGGAPWNPGGFGQAILSAAPITDAVNVEYPDGG---- 163

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            + +R  + +  E+ G+ + V + HL                    + Q + L   + + 
Sbjct: 164 -SEDRGYLAVTTEVGGRSVRVFNTHL-----------AQRRQEEFRTDQVRVLAKEVARH 211

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           + +    ++ GDFN         D  W      D            C    + +     D
Sbjct: 212 ERA----IVVGDFNAVP-EASELDPMWSLATDTDPQCHPAPG--GTCEPTTDWQ--SKFD 262

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y  +       +       +              SDH  +  D D
Sbjct: 263 YVFLRG-----VAPREHRVVRTAH----------SDHDLLYADLD 292


>gi|109731864|gb|AAI15571.1| Deoxyribonuclease I [Mus musculus]
          Length = 283

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 86/288 (29%), Gaps = 33/288 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+ ++NI T  E +  +   +             +       DI  +QE+   + V
Sbjct: 20  AGTLRIAAFNIRTFGETKMSNATLSVY---------FVKILSRY--DIAVIQEVRDSHLV 68

Query: 81  A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A  K+  +       +   +++      +         R   V +L       G +   +
Sbjct: 69  AVGKLLDELNRDKPDTYRYVVSEPLGRKSYKEQYLFVYRPDQVSILDSYQYDDGCEPCGN 128

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQ 197
              +R    +       ++    I                 + +    +   L D ++  
Sbjct: 129 DTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEIDALYDVYLDV 176

Query: 198 KKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            ++      +  GDFN   +Y+ ++      +  +        +       + +      
Sbjct: 177 WQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTVTSTHCAY--- 233

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
            D  V+     +  +  + +   +  +   S    + +SDH P+ +  
Sbjct: 234 -DRIVVAGALLQAAVVPNSAPFDFQAEYGLSNQLAEAISDHYPVEVTL 280


>gi|313892072|ref|ZP_07825670.1| exodeoxyribonuclease III [Dialister microaerophilus UPII 345-E]
 gi|313119524|gb|EFR42718.1| exodeoxyribonuclease III [Dialister microaerophilus UPII 345-E]
          Length = 254

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 81/308 (26%), Gaps = 82/308 (26%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +SWN+N L          +                KNL+AD   LQE        
Sbjct: 2   NNLKYISWNVNGLRACIKKGFLDS---------------FKNLNADCFCLQETKLQPHQI 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  + S                ++  A+  K   +                  
Sbjct: 47  ELNIPGYYQYWNSAI-----------KKGYSGTALFTKIKPISVS--------------- 80

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE- 200
                 + +E + ++  ++    ++   +           + L  + +W  D+     + 
Sbjct: 81  ----YGMNIEEHDQEGRLITAEFENHFLVVCYTPNSQRQLARLEYRMKWENDFKNYLLKL 136

Query: 201 -SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244
               P ++ GD N                      +    + T+  N     F      +
Sbjct: 137 TESKPVILCGDLNVAHKEIDLANPSSNHKNAGFTDDERKKFSTLLENGFTDTFRYLYPDK 196

Query: 245 CNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +A                  IDYF++       +                    + SDH
Sbjct: 197 KDAYSWWSYFAKSRERNIGWRIDYFLVSDKLKNKIKDAKIH-----------PEIQGSDH 245

Query: 296 CPISIDYD 303
           CP+ + +D
Sbjct: 246 CPVELTFD 253


>gi|293375717|ref|ZP_06621989.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
 gi|292645660|gb|EFF63698.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
          Length = 254

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 78/285 (27%), Gaps = 36/285 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++V++N+             + +    +  + +    K+   D++  QE+ +  ++ 
Sbjct: 3   NELKIVTFNLR--------ITVDDGLNVWENRVSHVVHKIKSEAPDLIGFQEL-TEISLR 53

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  + T  +F    R    S        +                 P            
Sbjct: 54  DLKRQLTDYVFVGCGRDEQMSGEMVMIAYNKNKLDLMSLDIFWFSDTPYKPGSKKEMMIL 113

Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R     + +  +  +   V +               +  S   +    Q L D   +++
Sbjct: 114 ARPCNVAVFKNQLTNQIFRVYNT-----------HYDHMQSSIRVQSSEQLLNDLHLREQ 162

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
              +P +I GD N +             I   + L                 + KI IDY
Sbjct: 163 NISLPTLIMGDMNSEPQDEEIKAIVNNEIIELNDLTDKLDYTFHD-----YGKIKIKIDY 217

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               ++                       G  LSDH P+ +   F
Sbjct: 218 IFATKSVNASKAVAWADCF---------DGVYLSDHYPVMVRVTF 253


>gi|330806705|ref|YP_004351167.1| endonuclease/exonuclease/phosphatase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|253559456|gb|ACT32417.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens]
 gi|327374813|gb|AEA66163.1| Putative endonuclease/exonuclease/phosphatase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 292

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 82/298 (27%), Gaps = 58/298 (19%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLD 65
           ++        ++RL+S+NI      E    +     +          +   +    K  D
Sbjct: 22  VMSTGLPGDSRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHTGRAGNLQKIGDLLK--D 79

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVL 124
            D+V LQE    +  +    +                  R+       +  V  +     
Sbjct: 80  FDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLGQHSNGVLSRLRPWA 139

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            + +PL G K        R A+        + + V+ +HL                    
Sbjct: 140 IEDHPLPGPKG-------RGAILARFGEGPEALVVVMMHLALG-------------ARTR 179

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           + Q  ++++ I   K      V+ GD N               +     L          
Sbjct: 180 TMQLAYIRELIGGYKHQ----VLMGDMNTHATD----------LLQTSPLRDLGLLAPQL 225

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + R +  +D+ ++        ++     I              SDH P++++ 
Sbjct: 226 EATFPSWRPQRCLDHILLSPTLTLERVEVLAQPI--------------SDHLPVAVEI 269


>gi|170102771|ref|XP_001882601.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642498|gb|EDR06754.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 650

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/343 (11%), Positives = 91/343 (26%), Gaps = 89/343 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           +R+++WNIN +        W                   +L+ADI+  QEM S       
Sbjct: 1   MRILTWNINGVRTLPQYHPWNTLKAHD--------DILNHLEADIICFQEMKSSRPALPK 52

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR----------KKNVRVLQQSYPL 130
           +V    ++  F+S   R   +S   +       I ++           K      +    
Sbjct: 53  QVAVPPSYDSFFSFPIRKSGYSGVATYTRHSAVIPLKAEEGLSGVLQPKPPLTAAERISD 112

Query: 131 LGAKDSFSRAGNRRA--VELLVEINGKK-------IWVLDIHLKSFCFLDSLENTYSPSC 181
                  +   +         ++  G+          +++++  +        + Y    
Sbjct: 113 SDNYPPNAETASIEGDLDYADLDSEGRTVILDLGLFVLINVYCPNDGNGTEERDKYKMDF 172

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------------------ 217
             L      L+  +    +     ++ GD N                             
Sbjct: 173 HRL------LEMRVVGLIKEGREVMVVGDLNACAAIIDHCEGHLMVAKGLAEGLQGEEGF 226

Query: 218 --LGNNDDFWKTIDPND------------SLIRFPKEKDSRCNANK----NLRNKIPIDY 259
               +       + P D              +   ++    C   K    +      IDY
Sbjct: 227 WGKDSRRWMRGFLVPEDEGMPGGFMIDIVRKLWPERKGMYTCWNTKISARDSNYGTRIDY 286

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ +    ++       ++           + SDHCP+ +D 
Sbjct: 287 ILITRGLLPWVKAADIQPLI-----------KGSDHCPVYVDL 318


>gi|6980804|pdb|1DE8|B Chain B, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To
           Abasic Dna
 gi|6980805|pdb|1DE8|A Chain A, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To
           Abasic Dna
 gi|6980812|pdb|1DE9|A Chain A, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion
 gi|6980813|pdb|1DE9|B Chain B, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion
          Length = 276

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 11  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 55

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 56  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 105

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R  V            ++  ++ +                   +  + L   
Sbjct: 106 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 158

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 159 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 212

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 213 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 263

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 264 --GSDHCPITL 272


>gi|326402657|ref|YP_004282738.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301]
 gi|325049518|dbj|BAJ79856.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301]
          Length = 267

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 73/305 (23%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                       LL         DIV LQE         +
Sbjct: 4   LTVATWNIN----------------SVRLRRDLLHSLMDQAAPDIVCLQE---TKVPDDL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP++          L            +  +A+  +      +  P    K         
Sbjct: 45  FPEDL------GTALGLPHVLKRGMKGYNGVAILSRLPLTAVEDTPDWCMKSDCRH---- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   ++     + + + ++ +    D  +   +P            +D     +    
Sbjct: 95  --IAARIDTGTDPLVLHNFYVPAG--GDIPDRAENPKYGHKLDFIAEARDHFAMNRPHRT 150

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                  ++     +          +              
Sbjct: 151 --MLVGDLNIAPLENDVWSHKQLLNVVSHTPPETEGLNAWRTEGFIDAIRHFVPDDQKLF 208

Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+  +  +    L + +  +            +R SDH P+
Sbjct: 209 TWWSYRNRDWRASNRGRRLDHIWVSTDLIGNLARHAILQD-------ARDWERGSDHVPV 261

Query: 299 SIDYD 303
            +  D
Sbjct: 262 VLALD 266


>gi|320354858|ref|YP_004196197.1| endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM
           2032]
 gi|320123360|gb|ADW18906.1| Endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM
           2032]
          Length = 243

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 85/292 (29%), Gaps = 60/292 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT----TSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +R + +NI   +       +             +++ +R++ +++  D++ L E+   + 
Sbjct: 1   MRFLLYNIRYAAGHGSRFHFPFPYAGYLRHSHDNFSKIREFIRSVQPDVMGLVEVDGGSF 60

Query: 80  VAK-------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                     +  +  +     T+       +          AV  +   +  + +    
Sbjct: 61  RTDQLCQAEMLADQLGYYHVIETKYGSASMAKRLPLLKTQGNAVLTRMPIISHRFHYFDE 120

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                          L++++  +++ +  +HL                      Q + L 
Sbjct: 121 -----------GVKRLVIQVCTERLTIFLVHLSLTY-------------RNRQYQLERLY 156

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             I Q      P ++AGDFN             + ++              +  +  +  
Sbjct: 157 KLIRQV---DRPMILAGDFNVL--------WGMRELELFLGATGLISANPEKKPSYPSRA 205

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            K  +D+ +                + ++   +       SDH P+  D+ F
Sbjct: 206 PKRELDFILHSPEL---------KVVHFHIPSV-----TYSDHAPLICDFTF 243


>gi|240081821|ref|ZP_04726364.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA19]
 gi|240114099|ref|ZP_04728589.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae MS11]
 gi|240114662|ref|ZP_04728724.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID18]
 gi|240122497|ref|ZP_04735453.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID332]
 gi|240126654|ref|ZP_04739540.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae SK-92-679]
 gi|260441531|ref|ZP_05795347.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae DGI2]
 gi|268597918|ref|ZP_06132085.1| exodeoxyribonuclease [Neisseria gonorrhoeae FA19]
 gi|268600168|ref|ZP_06134335.1| nuclease [Neisseria gonorrhoeae MS11]
 gi|268600307|ref|ZP_06134474.1| nuclease [Neisseria gonorrhoeae PID18]
 gi|268681088|ref|ZP_06147950.1| nuclease [Neisseria gonorrhoeae PID332]
 gi|268685234|ref|ZP_06152096.1| nuclease [Neisseria gonorrhoeae SK-92-679]
 gi|291044894|ref|ZP_06570603.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|268551706|gb|EEZ46725.1| exodeoxyribonuclease [Neisseria gonorrhoeae FA19]
 gi|268584299|gb|EEZ48975.1| nuclease [Neisseria gonorrhoeae MS11]
 gi|268584438|gb|EEZ49114.1| nuclease [Neisseria gonorrhoeae PID18]
 gi|268621372|gb|EEZ53772.1| nuclease [Neisseria gonorrhoeae PID332]
 gi|268625518|gb|EEZ57918.1| nuclease [Neisseria gonorrhoeae SK-92-679]
 gi|291011788|gb|EFE03784.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 259

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 47  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFGRLGVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|170074079|ref|XP_001870509.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus]
 gi|167870837|gb|EDS34220.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus]
          Length = 423

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 87/298 (29%), Gaps = 40/298 (13%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A ++ +++ NI  +                      + +   + + DIV LQE+ S +  
Sbjct: 2   ALELSILTLNIWGIPYVSKDRA---------VRVEAIGEVLASGNYDIVSLQEVWSESDY 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----- 135
             +  +    + ++                 + +AV  K   V    +            
Sbjct: 53  RYLKERAAAALPFAHYFYSGVVG--------SGLAVLSKYPIVSAFFHAWSVNGYVHRIQ 104

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                G +    + + +N + + V   HL +       + +     +    QA     +I
Sbjct: 105 HGDWFGGKGVGFVKISVNEQLVHVYAAHLHA-----EYDRSCDDYMAHRVIQAYDTAQFI 159

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCN 246
              + + V  V+AGD N +   L            D   K +  +  L      ++S  +
Sbjct: 160 ENTQGNGVLQVLAGDLNTEPGDLAYRVLQTCSRLTDSADKKMYASGDLNTNEIARNSYTD 219

Query: 247 A--NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               K       IDY +           +     L   D I  +    SDH  +    
Sbjct: 220 PEAAKKSPKGKRIDYIMYR--FGSHYEGKLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275


>gi|327393209|dbj|BAK10631.1| endonuclease/exonuclease/phosphatase family protein YbhP [Pantoea
           ananatis AJ13355]
          Length = 253

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 53/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ N +                        LR+  +   ADIV LQE+   + +  
Sbjct: 9   SFKVLTINTHKGFAPFNRRF----------ILPELREAVRATSADIVLLQEVMGTHDIHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  +   F +     +  + +     + H   AV  +      Q+  +  A   
Sbjct: 59  LQHENWPNTSHYEFLADTMWNDFAYGRNAVYPEGHHGNAVLSRFPIAEYQNRDVSVAG-- 116

Query: 137 FSRAGNRRAVE--LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              + NR  +   + +      + V+ +HL                 +    Q   L + 
Sbjct: 117 ---SENRGMLHCQITLPAPYGTLHVICVHLGLK-------------AAHRRAQMAMLNEM 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +        P V+AGDFN               +        F  +              
Sbjct: 161 VLA-LPPDAPVVVAGDFNDWQGRANKILQKGAGLKE-----VFSIKHGRPARTFPARFPL 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D   +               + +     +     LSDH P++++ 
Sbjct: 215 LRLDRIYVRNA-----------TVSHPWALPRKPWSHLSDHAPLAVEI 251


>gi|219122782|ref|XP_002181718.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406994|gb|EEC46932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 489

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/341 (13%), Positives = 94/341 (27%), Gaps = 76/341 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +R+ SWN+  L      S               L  + +  + D++ LQE     + 
Sbjct: 164 SYTMRIASWNVAGLRALMRNSP------------HALSDFVREHNVDVLCLQETKLQESH 211

Query: 81  AK---------VFPKNTWCIFYS-TERLINHSKRDSN-------------NDIHTAIAVR 117
                      +  K  +  +YS +     +S                      T  +  
Sbjct: 212 LDDPKLKIRGHLLEKEGFDSYYSCSTARKGYSGTSVFVKRRQLIKGSKVAKKQKTLGSYF 271

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN----GKKIWVLDIHLKSF-----C 168
            KN      S  L G ++            +  ++N      +  ++ +   SF      
Sbjct: 272 GKNDERETSSNSLKGTEELSIDPHLLVPEGVSFQMNVDKHDSEGRIVVVDFPSFTMCNVY 331

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------- 219
             +S +     S         +L     ++K+  VP +  GD N     L          
Sbjct: 332 VPNSGQKLERLSYRTEEWDKDFLSFIQKKQKDRGVPVLWLGDLNVAHTNLEVWNDGAKHL 391

Query: 220 --------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVM 262
                        ++       +  F +   +          +           +DYF+ 
Sbjct: 392 AKQAGVTAEERASFEAQLNAGFIDAFRRLHPTAKGHYSYWSQRAGNREPNKGLRLDYFIC 451

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D + +    +          D      ++ SDHCP+ ++ +
Sbjct: 452 DPSLFDEESKTIVR------DSYVLPLQQGSDHCPVVLELE 486


>gi|159896951|ref|YP_001543198.1| endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159889990|gb|ABX03070.1| Endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 1052

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/350 (12%), Positives = 84/350 (24%), Gaps = 67/350 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY-------------TLLRQYA 61
           P +  +   +R+   N+       G       V    +D                     
Sbjct: 573 PTSLELDGSLRVAGINVLNYFNTFGNGNCTGGVGGAATDCRGAENTTEFQRQKDKTIAAI 632

Query: 62  KNLDADIVFLQEMGS-----YNAVAKVFPKNTW------CIFYSTERLINHSKRDSNNDI 110
               AD++ L E+ +      +A+  +                  +     +     + I
Sbjct: 633 IMTQADVIGLMEIENDGFGSNSAIQDLVNGLNAATAPGTYALVDVDTRTGQTNPLGTDAI 692

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSR------AGNRRAVELLVE--INGKKIWVLDI 162
             A+  +   V +   +  L                 NR A+        +G+   V+  
Sbjct: 693 KVALLYKPGKVSLAGTTAVLNTGAFGDFTTSSGTTGRNRPALTQSFTETSSGETFTVVVN 752

Query: 163 HLKS----------FCFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKES--LVPFVIAG 209
           HLKS              D        +C+      AQ L  W+     +     ++I G
Sbjct: 753 HLKSKGSACTDNVSPVPSDPDLGDGQGNCNLTRKTAAQELVAWLNTDPTNVDDSDYLIIG 812

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           D N               I     +            +         +D+ +   + +  
Sbjct: 813 DLNSYAMEDPI-----TAIRNAGYVNIPKTLLGDEAYSYIFDGQTGSLDHALASTSLFSQ 867

Query: 270 LIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDY 302
           +       I  +E                         R SDH PI +  
Sbjct: 868 VADVQELHINADEPIALDYNTNFKSAGQIVSLYNNDAYRASDHDPIVVGL 917


>gi|307566177|ref|ZP_07628632.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           amnii CRIS 21A-A]
 gi|307345142|gb|EFN90524.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           amnii CRIS 21A-A]
          Length = 365

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 93/335 (27%), Gaps = 80/335 (23%)

Query: 2   IRKYVLALVFFLVPCTASVA------------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49
            +   L ++   +      A              ++++S+N+      + VS   N    
Sbjct: 67  KKVLWLPILGLFLAYFPIRAYIPFNLPKDKPHGTIKILSYNVFLFDTWDDVSGQINP--- 123

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  + +Y     ADIV LQE         ++      I    ++   +        
Sbjct: 124 -------IVKYIVRSKADIVCLQEAT-------LYTPKAAKIMRYLKKSYPYIDNIKKKT 169

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               + +  K   + ++  P     +          V   + ING K  +++ H +S+  
Sbjct: 170 GTDDLMLLSKFPILHREIIPYPSKSNMS--------VAYYININGTKTLLVNNHFESYGL 221

Query: 170 LDSLENTYSPSCS------------------------LLSQQAQWLKDWITQKKESLVPF 205
             + +  ++                              + QA  +  ++ +  +  +P 
Sbjct: 222 SSNDKADFNNIIKGNVIGRDRINKFVSLVDKIGNTMARRAPQADAVATFVKKHLDKNIPV 281

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           ++ GDFN             K ++ +     +    +         R    ID+      
Sbjct: 282 ILCGDFNDNPISYSYY-TISKVLNDS-----YKSSGNGIGWTYNENRMYFRIDHIFASNE 335

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +  +   S                SDH PI  
Sbjct: 336 FEPYGAKVDKSIKN-------------SDHYPIYC 357


>gi|255066692|ref|ZP_05318547.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256]
 gi|255049020|gb|EET44484.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256]
          Length = 259

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEA---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +   +  H         ++ +AV  K           +G          R
Sbjct: 43  ---DLSDEMKNPHGMHGHWHCA-EKRGYSGVAVYSKRAP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  K+ V+ ++L S       +        L  +        +   K    
Sbjct: 95  F-----VRCDFGKLSVISLYLPSGTSAPERQ-------ELKYRFLDAFYPMLEAMKAEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|237749022|ref|ZP_04579502.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229380384|gb|EEO30475.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 321

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 92/311 (29%), Gaps = 39/311 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWK---NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           Q++RL ++N+  L   +          +     +    + +     DAD++  QE+ S  
Sbjct: 3   QEIRLATFNVRNLVLPDTAYYDDLAAYTHDEYEAKTEWIAKKIDQSDADVIGFQEIFSKK 62

Query: 79  AVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLG 132
           A+  V       ++   I +         K          +A   + +    +Q    L 
Sbjct: 63  ALEHVIEKSRLYRDAELICFDQNNPPATLKPQVALLTRLPLAGSPQSHKTFPRQFEITLP 122

Query: 133 AKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             ++     +R  +E  ++  NG+ + +  +HLKS           S          + L
Sbjct: 123 ITETVINQFSRPVLEAPVLLPNGQILNIFVVHLKSKRPDFLNFVNKSDPYQYGLAALRSL 182

Query: 192 KDWITQ-----------KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                            ++ + +P  I GDFN     L          +        P  
Sbjct: 183 MRRSADALGVRALVSEFRENNALPIAILGDFNDF--SLAITTTIVSGQEHESEQPLPPFY 240

Query: 241 KDSRCNANKNL--------------RNKIPIDYFVMDQNAYKF--LIQESFSEILYNEDD 284
           K   C   +                     ID+  + +        I  +   ++Y  ++
Sbjct: 241 KLYDCYEIQTDPAKNQDKILRFMEENGTARIDHIFVSEEFTPETGYITGAVKRMIYLPNE 300

Query: 285 IKSRGKRLSDH 295
                  +SDH
Sbjct: 301 AGPERIEMSDH 311


>gi|189466216|ref|ZP_03015001.1| hypothetical protein BACINT_02586 [Bacteroides intestinalis DSM
           17393]
 gi|189434480|gb|EDV03465.1| hypothetical protein BACINT_02586 [Bacteroides intestinalis DSM
           17393]
          Length = 529

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 81/294 (27%), Gaps = 36/294 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+N+                       T +    K +DADI  L E+   +++  +
Sbjct: 153 LKVVSFNVENY------------KGVNDVQRTKIVAALKAMDADIYALLEVFGNSSLNDL 200

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  + I     +S  +   A  +   N  +  +        D+      +
Sbjct: 201 CTALNTACQTNQYKYI----ENSTANQGMACFIYNSNTVIPFKELQKNRLADNGYLPDRK 256

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP-------SCSLLSQQAQWLKDWIT 196
            A    ++ N ++  V   H K+     +  + Y+               +A+   ++I 
Sbjct: 257 IAQAFDLKANNERFIVCLNHWKAKDNSYNKPDEYADTGDGQGSHVLRRVHEAEATLEFIK 316

Query: 197 QKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                      ++ GD N               +          +   +  + N      
Sbjct: 317 TVTAYFEDEDVLVVGDLNSYSKEDPIRVLEEGKLINELQKYAPNEYSYAFFSNNSYAT-- 374

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIK---------SRGKRLSDHCPIS 299
             +D+          +       I  +E  +              R SDH PI 
Sbjct: 375 GYLDHSFATATLDAQICYAHPFHINADEPGVLKIIGGKPQKDNMYRCSDHNPIV 428


>gi|153939510|ref|YP_001391121.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum F str. Langeland]
 gi|152935406|gb|ABS40904.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum F str. Langeland]
 gi|295319165|gb|ADF99542.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum F str. 230613]
          Length = 352

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 98/311 (31%), Gaps = 44/311 (14%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               +V++NI               G     +S ++T  +   +  + K  ++  +FLQE
Sbjct: 53  DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQE 112

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127
           + + +   + F  + +    ++ +  + S   +       + + K +  V      L + 
Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 +  +    +       ++    +  V   + +    ++S  + Y     +  QQ
Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENDRELVLINSHLSAYDKGGKIRKQQ 230

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236
             +LK++I ++ +     ++ GD+N  I               D   K  +    +    
Sbjct: 231 LSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 290

Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID F++  N    +   S         +       
Sbjct: 291 VADKNVPTTRTDATPYKKGENFTAVIDGFLVSDN----IEATSVKAYPMEFKNT------ 340

Query: 292 LSDHCPISIDY 302
             DH P+ +++
Sbjct: 341 --DHNPVKMEF 349


>gi|331014877|gb|EGH94933.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 291

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   +       D D+V L
Sbjct: 30  PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHVGRAGNLQKIGDLIN--DFDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFVNQVEHLAQLGGFPFWYQQLNRNLGRFAQHSNGVLSRLRPTKIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAHPI--------------SDHLPVAVEI 271


>gi|330938836|gb|EGH42355.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 265

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 80/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      +    +     +          +   +         D+V L
Sbjct: 4   PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLINEF--DLVAL 61

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 62  QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 121

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 122 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 161

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 162 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 207

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 208 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 245


>gi|294499447|ref|YP_003563147.1| exodeoxyribonuclease III [Bacillus megaterium QM B1551]
 gi|294349384|gb|ADE69713.1| exodeoxyribonuclease III [Bacillus megaterium QM B1551]
          Length = 253

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 80/304 (26%), Gaps = 79/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                         Y + ++AD+  +QE          
Sbjct: 1   MKLISWNVNGIRACVRKGF---------------LDYFQEVNADVFCIQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                       +   +       S    R
Sbjct: 45  LQLEGYYQYWNYAVKKGYSGTAVFTKQ---------------KPLSVSYGVGKESEDEGR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  ++ +V++++  +     +           L    + L         S  
Sbjct: 90  I-----ITLEFEQCYVVNVYTPNSKRDLARLEERLQWEDDLLVYLKKLN--------SRK 136

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +                       T+  +  L  F     ++  A 
Sbjct: 137 AVILCGDLNVAHAEIDLRNPKPNRGNSGFTIEERGKMTTLLASGFLDTFRYLYPNQEGAY 196

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     + + +    +             SDHCP+ 
Sbjct: 197 TWWSYMNKVRERNIGWRIDYFIVSERMKNVIQESAIHPHV-----------MGSDHCPVM 245

Query: 300 IDYD 303
           ++ +
Sbjct: 246 LELN 249


>gi|256822174|ref|YP_003146137.1| exodeoxyribonuclease III [Kangiella koreensis DSM 16069]
 gi|256795713|gb|ACV26369.1| exodeoxyribonuclease III [Kangiella koreensis DSM 16069]
          Length = 271

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 80/312 (25%), Gaps = 76/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V++NIN                   +    +    +  D DI+ LQE          
Sbjct: 1   MKIVTFNIN----------------SVRTRPHQIEALVEKHDPDIICLQE---TKVHDDA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +         + +         H  +A   K   +  +       +D+      R
Sbjct: 42  FPFELYA-------DLGYHIEIHGGKAHYGVATFSKQKPLTVEKGFATDPEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +    +   + I VL+       F       +        +    L  ++   +    
Sbjct: 90  RMIITTYQFGNETIKVLN-----GYFPQGENREHPVKFPYKQKFYADLLSYLQNDQGDHR 144

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N                        ++L    ++ + I        +     
Sbjct: 145 T-IVLGDINISPEDIDIGIGEPNRKRWLREGKCSFLPEEREWLQKILATGLYDTYRTINP 203

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID         +  +         + D      +R
Sbjct: 204 DVDDKFSWFDYRSRGFEREPRRGLRIDSVFACDWLNERAVAS-------DIDYEIRSMER 256

Query: 292 LSDHCPISIDYD 303
            SDH P+  ++D
Sbjct: 257 PSDHAPVWTEFD 268


>gi|300813916|ref|ZP_07094220.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511979|gb|EFK39175.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 275

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 85/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++L+     S  +  + R       +    ++ D D+  +QE          
Sbjct: 1   MKFISWNIDSLNAALTSSSNRAILTR------AVLSSIRDEDPDLFAVQETKLPPTGLSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K      +     +  + ++     +    +  K     + +YP +GA  S    G  
Sbjct: 55  KHKEILEKEFQDYSYVYVTSKEEARKSYAGTMIFYKKDLECKATYPEIGAPGSMDMEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  K  +   ++  +        +          +  Q L        +   
Sbjct: 114 -----ILTLEFKDFYFSTVYTPNAGDGLKRLSDRQVWDKKYLEYCQEL--------DKNK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GDFN                           +  +     +  F           
Sbjct: 161 PLVLCGDFNVAHKEIDLANPNNNHFSAGFTDEERMGFTNLLDGGFVDTFRLINGDVEGKY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++ Q     + +    +    +           DH PI
Sbjct: 221 TWWAQRIKTSKINNSGWRIDYFLVSQRIKDKVKKSHMMDSGQRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 ILEID 274


>gi|163814394|ref|ZP_02205783.1| hypothetical protein COPEUT_00545 [Coprococcus eutactus ATCC 27759]
 gi|158450029|gb|EDP27024.1| hypothetical protein COPEUT_00545 [Coprococcus eutactus ATCC 27759]
          Length = 382

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 100/321 (31%), Gaps = 59/321 (18%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           S+   + +V+WNI               G S++ ++ ++  ++ + + +   +L  DI+ 
Sbjct: 79  SIGDNISVVTWNIGYGSLGANADFFMDGGDSVYTSTKEQVLTNMSAITEELNSLSPDIIL 138

Query: 71  LQEMGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           LQE+   ++          +    P       Y+ + L+          + + I      
Sbjct: 139 LQEVDEKSSRSHKINEASIIRDELPSYNSSYAYNYKTLMVPYPIPPIGQVASGIMTLSTY 198

Query: 121 VRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                    L        R  N  R  +   V I+G    ++ ++L    +         
Sbjct: 199 PASTACRIKLPCPFSYPIRLCNLKRCLIVSKVPIDGTDKELVIVNLHLEAYD-------- 250

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWK-----T 227
            S    + Q + L D +  + +     +  GDFN+  +          +D+ W       
Sbjct: 251 -SGEGKAAQTKMLADILQAETDKGNYVIAGGDFNQTFSNTDISAYPQQSDELWAPSLIDI 309

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILY 280
            +  +            C +     +          ID F++  N     I         
Sbjct: 310 SEFGNDFTCITDSSVPTCRSLDKSYDDADEKFQFYVIDGFIVSSNISIKSI--------- 360

Query: 281 NEDDIKSRGKRLSDHCPISID 301
              +  +   + SDH PI ++
Sbjct: 361 ---ETVNLNFQNSDHNPIKLE 378


>gi|149918584|ref|ZP_01907073.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1]
 gi|149820660|gb|EDM80072.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1]
          Length = 262

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 77/306 (25%), Gaps = 72/306 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+   L++WN+N                   +    +  Y    + D+  LQE    NA+
Sbjct: 2   AKGFSLMTWNVN----------------SVRARLDNVLTYLDEHEPDVACLQETKVENAL 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             + +    +    +  +A   K  + +          +   + 
Sbjct: 46  ----------FPRVPFMELGYQVALNGTKGYAGVATLVKGQKPVDVQLGFAEGPEDKHKR 95

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   ++ +  + + + +++  +   L S    Y             L+  +  +  
Sbjct: 96  --------ILALTYEGVRIYNLYAPNGTALGSEAFAYKLD------WFARLRGELDARFG 141

Query: 201 SLVPFVIAGDFNRK---------------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                V+ GDFN                  ++          ++       F K  D+  
Sbjct: 142 PSDEVVLCGDFNIARDARDTWSVESMKGGTHFTPEEHAALDALENFGLHDCFRKFDDAPG 201

Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY      A +   +          D         SDH 
Sbjct: 202 R-FTWFDYRGGSWEKKHGLRIDYVYATAPATERCTEV-------VHDWEPRAWDEPSDHV 253

Query: 297 PISIDY 302
           P+   +
Sbjct: 254 PVVARF 259


>gi|37993831|gb|AAR06996.1| sphingomyelinase [Bacillus cereus]
          Length = 252

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 26/230 (11%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTNQNNTLKVMTHNVYMLSTS----LYPNWGQNERADLIGAADYMK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             NA  ++           T         E         S+      +A+  K   + + 
Sbjct: 83  DNNASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIIEKI 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y +           N+  V   V+ N + + V+  H+++    D++    SP+ S+ ++
Sbjct: 143 QY-VFEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHIQA---EDNMCGQTSPA-SVRTK 197

Query: 187 QAQWLKDWI-TQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDP 230
           Q Q ++++I  +   +    +I GD N        N        +KT+  
Sbjct: 198 QLQEIQEFIKNKNISNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHA 247


>gi|332883576|gb|EGK03859.1| hypothetical protein HMPREF9456_01926 [Dysgonomonas mossii DSM
           22836]
          Length = 315

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 86/322 (26%), Gaps = 57/322 (17%)

Query: 27  VSWNINTL-------SEQEGVSLWKNSVKRTTSDY--------TLLRQYAKNLDADIVFL 71
           + +N+  L       +  +        +  T   Y          +    +     IV L
Sbjct: 1   MFYNVENLYDTKDNPATNDDEFTPGGQLHWTNYRYWQKLHNISKAVSSVGEGYPPAIVGL 60

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            E+ + + +  +  +           +     +      + A+  ++  ++++ +     
Sbjct: 61  CEVENDSVLYHLTKRTALQKHKYEYIITRSKDQ---RGSNVALLYQRDQIKIVSRKSYTP 117

Query: 132 GAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              DS      R  + +  + I G  + +   H  S          +   C      AQ 
Sbjct: 118 DLGDSVRS--TRDILHVTGKVIKGTLLDIFVCHFPSRREGIRKTRPHRIKC------AQL 169

Query: 191 LKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPNDSLIRFPKEKD 242
           L+  I            +I GDFN   N +  ++                  + + +   
Sbjct: 170 LRHKIDSVLLLRKGANIIIMGDFNDYPNDVSMSEVLGGKRIESDISVKGLYNLLYDRIDK 229

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKF-----LIQESFSEI-----------------LY 280
               + K       ID  V++ N  K      +  ++                      +
Sbjct: 230 KEAGSYKYKGKWGFIDQIVVNGNLLKKGGKVFVKDKTVHVFSAEFLLEADNKKYGGQKPF 289

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH PI +D 
Sbjct: 290 RTYSGFKYLGGYSDHLPIYMDL 311


>gi|330506670|ref|YP_004383098.1| exodeoxyribonuclease III [Methanosaeta concilii GP-6]
 gi|328927478|gb|AEB67280.1| exodeoxyribonuclease III [Methanosaeta concilii GP-6]
          Length = 257

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 77/306 (25%), Gaps = 77/306 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80
            +R++SWN+N L                         +      D++ LQE+ +      
Sbjct: 3   SMRILSWNVNGLRAIYKKGF---------------VDWLLKDRPDVLCLQEIKATEDQIP 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++     +  F+S                   +A+  K   +  +    L   D   RA
Sbjct: 48  KELKGLPGYISFFSP----------GARKGRDGVALFTKIKTLSLEYSLGLPGFDDEQRA 97

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                    +  +     + D++  +               S   +      D + +   
Sbjct: 98  ---------IVADYGDFLLFDVYFPNG-------KASKERLSYKMRFYDLFLDLMDRLVA 141

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                VI GD N                    L     +   +  +  L  F        
Sbjct: 142 EGRDIVICGDVNTAHKEIDLARPKPNEKISGFLPEERAWIDRLIEHGFLDTFRLFHPEGE 201

Query: 246 NANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +                IDYF +       +      + +Y            SDHCP
Sbjct: 202 KYSFWDMKTRARERNVGWRIDYFFVSLGMRDRVKSAFILDDVY-----------GSDHCP 250

Query: 298 ISIDYD 303
           + I+ +
Sbjct: 251 VGIEIE 256


>gi|229101774|ref|ZP_04232490.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
 gi|228681641|gb|EEL35802.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
          Length = 190

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 16/190 (8%)

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS- 178
             ++L ++   +G +++   +  R+ +       G+ + V+  HL S     +       
Sbjct: 6   VPKLLDKNVVRIGDENALFDS-TRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGKVQP 64

Query: 179 ---PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
               S     Q AQ +  ++   QKK +  P V+ GD N             K ++    
Sbjct: 65  LVLKSEEKRIQLAQEVNHFVQGIQKKNANAPVVVLGDMNDFEFSKP-----LKALEGTIL 119

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                           +  N   +D+ ++  N        +  + ++   +I     R+S
Sbjct: 120 KDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGRVS 175

Query: 294 DHCPISIDYD 303
           DH P+    D
Sbjct: 176 DHDPVLAQID 185


>gi|147898516|ref|NP_001079795.1| hypothetical protein LOC379485 [Xenopus laevis]
 gi|32450236|gb|AAH54251.1| MGC64462 protein [Xenopus laevis]
          Length = 345

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/295 (11%), Positives = 88/295 (29%), Gaps = 29/295 (9%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +  C        ++ S+NI   S                    LL +     +  I+ ++
Sbjct: 1   MTACFLQAGFAFKIASFNIQRFSMT---------KVDDPVVLELLIRILSRYE--IIAIE 49

Query: 73  EM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+      A+  +  + +     +   LI+     S+     A   R+  V+  +  +  
Sbjct: 50  EVMNADNTAIISLVKELSLATKLNYNVLISDHLGRSSYREKYAYVYREDIVKPTEWYHFD 109

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G ++  + +  R             +  +           S +       +L       
Sbjct: 110 DGCENCGTDSFIREPFVARFT----SLTTVVKDFALISIHTSPDYAIMEVDALYDAWVDA 165

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
            +         +   +I GD+N   +Y+ +       +   + L+    +K+    +   
Sbjct: 166 KQRL------KMENILILGDYNAACSYVASRHWPIIRLRHVEELVWLIGDKEDTTVSTNT 219

Query: 251 LRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
                  D  V       + ++ ++     Y+     +    K +SDH P+ ++ 
Sbjct: 220 N---CAYDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTYEMAKAVSDHYPVEVEL 271


>gi|329115285|ref|ZP_08244040.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001]
 gi|326695728|gb|EGE47414.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001]
          Length = 139

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 12/135 (8%)

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
              D+L +   P+C+ L QQ   L  W+  + +    F I GDFNR +     +D  + T
Sbjct: 6   GCPDNLPHATRPTCATLWQQFAVLDAWVAIRTQHHEAFAIMGDFNRHLT---VHDPLFLT 62

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +     L        S C           ID+ ++   A  + I  S       E+    
Sbjct: 63  LLRIAPLDLVTAGTASPCQNGSYF-----IDHIILGGAARAWKIPNSLRVTPLAEEV--- 114

Query: 288 RGKRLSDHCPISIDY 302
            G+ LSDHCP+SI  
Sbjct: 115 -GQTLSDHCPVSITL 128


>gi|326406489|gb|ADZ63560.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. lactis CV56]
          Length = 352

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 55/316 (17%)

Query: 21  AQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            Q  +++++NI               G  +   S     S      +       D   +Q
Sbjct: 56  GQTYKMMTFNIGYGSYPPSFNFFMDGGDDVRAYSKSAVKSAIQEDIRLINKEKPDFGNIQ 115

Query: 73  EMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRDSNNDI---HTAIAVRKKNV 121
           E+      ++   +          +    +      +        I    + I    K  
Sbjct: 116 EIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAYLFYPVTKPIGKAKSGIMTYSKYE 175

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 Y L    +        RA  + +   + + KK  + + HL +F           
Sbjct: 176 IESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDKKFVIFNTHLSAFITDQ------- 228

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPND 232
               +  QQ   L D + +        +   D+N  +    + +  W      + +    
Sbjct: 229 ---KIQKQQLLTLFDEMKKYVSKGDYVICGADYNHALAGKAHPELTWMKEFPTENLTKGM 285

Query: 233 SLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            ++        R       +         ID F++  N     IQ               
Sbjct: 286 RVVAPTNAPTVRSLDYAYDKKNPKNTFGIIDGFLVSNNIKDLKIQ------------TID 333

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+ +D+ 
Sbjct: 334 NQFKSSDHQPVVMDFS 349


>gi|300782769|ref|YP_003763060.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32]
 gi|299792283|gb|ADJ42658.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32]
          Length = 278

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 79/310 (25%), Gaps = 73/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + + N+N L                        ++     AD+V  QE+   +    A
Sbjct: 5   LTVSTVNVNGLRAAAKKGF---------------VEWLAATKADVVACQEVRAEASQLPA 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V   + W   ++           S       +AV  +      +    +G  +      
Sbjct: 50  AVVGPDGWFSVHAP----------SAVKGRNGVAVYSRVEPEEVR----IGFGEPEFEDS 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +E++   + V  ++L S       ++      +        L+    +   +
Sbjct: 96  GRY-----LEVHLPNVVVASLYLPSGDVGTERQDEKERFMAAFLPYLAELR---AKAAAA 147

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               V+ GD+N   +                         +            +      
Sbjct: 148 GREAVVVGDWNIAYDTVDLKNWRGNRKNSGFLPEERAWLGRVYTEAGYTDVQRRLDPEGP 207

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           ID  +      + ++           +   +  +R SDH 
Sbjct: 208 GPYTWWSYRGQAFDNDSGWRIDCQLATPGLAEKVVDV-------VVERAAAYDQRWSDHA 260

Query: 297 PISI--DYDF 304
           P++   D DF
Sbjct: 261 PVTATYDIDF 270


>gi|50540416|ref|NP_001002674.1| deoxyribonuclease-1 [Danio rerio]
 gi|49903846|gb|AAH76479.1| Zgc:92440 [Danio rerio]
          Length = 278

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 95/307 (30%), Gaps = 37/307 (12%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            K+++ L   LV     +     + ++NI +           NS     +   ++ +   
Sbjct: 1   MKFIITLGVLLVSV--HIGSSFLIGAFNIKSFG---------NSKVSNATLLDIITKVVH 49

Query: 63  NLDADIVFLQEMGSYN--AVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               DI+ +QE+   +  A +K+    N     Y  + + +     +          R +
Sbjct: 50  RY--DIILIQEVRDSDLSATSKLMDSVNGGSSPYQYDYIASEPLGRNTYKERYLFVYRSE 107

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +V  +   +   G +   +   NR    ++            +                 
Sbjct: 108 SVSAVNSFHYDDGCEPCGTDTFNREPFVVMFSSKTAVRDFALVPQH-------------T 154

Query: 180 SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           S  +  Q+   L D +   ++  +    ++ GDFN    Y+ N+      +  + S    
Sbjct: 155 SPEVAVQEIDALHDVVLDTRQRLNTNNIMLLGDFNAGCRYVSNSAWANIRLRTDQSYTWL 214

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295
             +       + N       D  V   +  + +   S     + E    S+   L  SDH
Sbjct: 215 IPDSADTTVTHTNCPY----DRIVATPDMMRGVAPGSAQVFDFMEAHGLSQDWALAVSDH 270

Query: 296 CPISIDY 302
            P+ +  
Sbjct: 271 FPVEVKL 277


>gi|77163744|ref|YP_342269.1| exodeoxyribonuclease III xth [Nitrosococcus oceani ATCC 19707]
 gi|76882058|gb|ABA56739.1| Exodeoxyribonuclease III [Nitrosococcus oceani ATCC 19707]
          Length = 237

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 77/271 (28%), Gaps = 60/271 (22%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +  + +    D++ LQE      V   FP+  +           +    S    +  +A+
Sbjct: 1   MVDWLEIHQPDVLALQE---TKLVDDSFPQEAFKEI-------GYHAAYSGQKTYNGVAI 50

Query: 117 RKKN-VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
             +   + +    P L           RR + + V+     I +L++++ +   + S + 
Sbjct: 51  LCRQAPKDILTDLPNLVDS-------QRRILGVTVD----DIRLLNLYVPNGSEVGSKKY 99

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------ 223
            Y             +KD++ +        ++ GDFN        +D             
Sbjct: 100 AYKLD------WLGRIKDYLQEALVEYPKLIVLGDFNVAPADQDVHDPDIWHETILCSTP 153

Query: 224 ---FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLI 271
                K I          +  +    +      +           ID  ++ +       
Sbjct: 154 EREALKEILALG-FQDSFRLFEQEAQSFSWWDYRGGAFRRNRGLRIDLILISKALVPKCT 212

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      D    R  R SDH P+   +
Sbjct: 213 GCVI-------DKEPRRLTRPSDHAPVIATF 236


>gi|329113350|ref|ZP_08242131.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001]
 gi|326697175|gb|EGE48835.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001]
          Length = 245

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/268 (11%), Positives = 71/268 (26%), Gaps = 51/268 (19%)

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            ++L  D+V LQE         +FP++                       +  +A+  ++
Sbjct: 1   MQHLAPDVVCLQE---TKVPDPLFPEDGVKALGFEHL------HYRGMKGYNGVAILSRH 51

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                   P+   K+          V   V     ++ + D ++ +    D  +   +P 
Sbjct: 52  PLRPVTQTPIWYGKEDCRH------VAATVCTPEGEMELHDFYIPAG--GDEPDPETNPK 103

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------------NYLGNNDDFW 225
            +      + + +W   +  +    V+ GDFN                  ++     +  
Sbjct: 104 FAHKLAFVEEVTEWFQSRPLNRT--VLVGDFNIAPLEHDVWSHKQLLKIVSHTPPETERL 161

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP----------IDYFVMDQNAYKFLIQESF 275
                   +                   +            +D+  M  +    L   + 
Sbjct: 162 NRWLQTGFVDAMRHFVPPEEKLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLLPNLHGMTV 221

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                         +  SDH P+ +D+ 
Sbjct: 222 V-------REARDWEGPSDHVPVVVDFS 242


>gi|260589302|ref|ZP_05855215.1| endonuclease/exonuclease/phosphatase family protein [Blautia
           hansenii DSM 20583]
 gi|260540383|gb|EEX20952.1| endonuclease/exonuclease/phosphatase family protein [Blautia
           hansenii DSM 20583]
          Length = 354

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/326 (13%), Positives = 102/326 (31%), Gaps = 64/326 (19%)

Query: 17  TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           T S+   +R++++NI               G  +  +S ++  ++ T +++      AD+
Sbjct: 50  TLSLDDSLRIMTYNIGYAGLDKSEDFFMDGGSEVQPDSKEQVETNLTGIKKVLTENPADV 109

Query: 69  VFLQEMGSYNAVAKVFPKNTW---------------CIFYSTERLINHSKRDSNNDIHTA 113
            FLQE+   +  +    +  +                  +    L    K +S     T 
Sbjct: 110 YFLQEVDKDSKRSFHIDETEYLKSSLNMEGIFAYNFKCDFVPYPLPPIEKVNSGIFTMTD 169

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + V       L +S+       +  R        + +E    ++ +++ HL+++   D  
Sbjct: 170 LKVNSAARLALPESFSWPVKTCNLKRCMQE--TRIPLEGTDAELVLINFHLEAYDDGDGK 227

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------RKINYLGNNDDFWKT 227
                        Q++ L + ++++ E+    +  GDFN       K       +     
Sbjct: 228 IA-----------QSKMLAEKLSKEYEAGNYVIAGGDFNQTFEGMDKYPITNTENWVPGI 276

Query: 228 IDPN---DSLIRFPKEKDSRCNANKNLRNKIP-------IDYFVMDQNAYKFLIQESFSE 277
           I  +   +       +    C                  ID F++  N     I    ++
Sbjct: 277 IGQDTLPEHFSFAVDDTYPTCRLLNAPYTGSYETSQVYVIDGFIVSDNITVSDISVINTD 336

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
             Y             DH P+ ++  
Sbjct: 337 FEYT------------DHQPVQMEIS 350


>gi|197303592|ref|ZP_03168630.1| hypothetical protein RUMLAC_02320 [Ruminococcus lactaris ATCC
           29176]
 gi|197297326|gb|EDY31888.1| hypothetical protein RUMLAC_02320 [Ruminococcus lactaris ATCC
           29176]
          Length = 250

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 73/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                         +    DADI  +QE          
Sbjct: 1   MKLISWNVNGIRACVQKGF---------------LDFFHEADADIFCIQETKMQEG-QLN 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  AV  K   +       +   D   R    
Sbjct: 45  LELERYHQYWN----------YAVKKGYSGTAVFTKKEPLSVSYGLGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  + + ++  +     +  +             + L+           
Sbjct: 91  -----VITCEFEDFYFVTVYTPNSQSELARLDYRMKWEDDFRAYLKKLEK--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           +  +     +  F      +    
Sbjct: 138 PVIVTGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTELLDAGFIDTFRYFYPDQEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L        +             SDHCPI 
Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKILTEV-----------MGSDHCPIE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|170033629|ref|XP_001844679.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus]
 gi|167874647|gb|EDS38030.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus]
          Length = 423

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 87/298 (29%), Gaps = 40/298 (13%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A ++ +++ NI  +                      + +   + + DIV LQE+ S +  
Sbjct: 2   ALELSILTLNIWGIPYVSKDRA---------VRVEAIGEVLASGNYDIVSLQEVWSESDY 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----- 135
             +  +    + ++                 + +AV  K   V    +            
Sbjct: 53  RYLKERAAAALPFAHYFYSGVVG--------SGLAVLSKYPIVSAFFHAWSVNGYVHRIQ 104

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                G +    + + +N + + V   HL +       + +     +    QA     +I
Sbjct: 105 HGDWFGGKGVGFVKISVNEQLVHVYAAHLHA-----EYDRSCDDYMAHRVIQAYDTAQFI 159

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCN 246
              + + V  V+AGD N +   L            D   K +  +  L      ++S  +
Sbjct: 160 ENTQGNGVLQVLAGDLNTEPGDLAYRVLQTCSRLTDSADKKMYASGDLNTNEIARNSYTD 219

Query: 247 A--NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               K       IDY +           +     L   D I  +    SDH  +    
Sbjct: 220 PEAAKKSPKGKRIDYIMYR--FGSHYEGKLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275


>gi|15965402|ref|NP_385755.1| exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021]
 gi|307308792|ref|ZP_07588488.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
 gi|307317265|ref|ZP_07596706.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
 gi|15074583|emb|CAC46228.1| Probable exodeoxyribonuclease III [Sinorhizobium meliloti 1021]
 gi|306897353|gb|EFN28098.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
 gi|306900798|gb|EFN31409.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
          Length = 264

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 77/303 (25%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ +    D+V LQE          
Sbjct: 1   MKIATYNVNGVNG----------------RLGVLLRWLEEASPDVVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  ++         L G  D      +R
Sbjct: 35  LKAPDPKFPVKAIEAAGYGAIWHGQKSWNGVAILARDREPTLTRKGLPGDPDDTH---SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + + +  ++L +       +  Y  +          L  +  +  E  V
Sbjct: 92  YIEAAV-----EGMVIGCLYLPNGNPYPGPKFEYKLAWFHR------LTAYAAELLELDV 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++AGD+N     L                   D +  +          +         
Sbjct: 141 PVILAGDYNVMPTELDVYKPERWVNDALFRIEVRDAYHRLLEQGWTDALRQLHPGERVYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          ID+ ++  +    L            D      +  SDH P  I
Sbjct: 201 FWDYFRNAFARDAGLRIDHLLLSPHVTLRLSAAGV-------DRHVRGWEHTSDHAPAWI 253

Query: 301 DYD 303
           +  
Sbjct: 254 ELS 256


>gi|305666478|ref|YP_003862765.1| hypothetical protein FB2170_09421 [Maribacter sp. HTCC2170]
 gi|88708745|gb|EAR00980.1| hypothetical protein FB2170_09421 [Maribacter sp. HTCC2170]
          Length = 297

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 88/318 (27%), Gaps = 40/318 (12%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M  K ++A +F  V       +  +L+S+NI    E            + T     L  +
Sbjct: 1   MKVKPLVAFLFLFVLTNGIGQENFKLISYNIWNGFEWG----------KDTVRQEKLLSW 50

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
             +   D+V LQE+  YN       ++     +    L+  +           I +++K 
Sbjct: 51  MDSKKPDVVALQELCDYN--DDKLTQDAKAWGHDYSVLLKTTGYSVGLTSKYPIVLKEKI 108

Query: 121 ----------------VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
                              +    P    K S         ++L ++   K   ++    
Sbjct: 109 IEGMHHGALHCSTNGFEIFVVHLSPSQWEKRSEEAEILSGIIDLEIKAGNK--VLVCGDF 166

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
            +    D+            +++     D     +E    + +   F     +   +   
Sbjct: 167 NALSPADADWYNSRADLLQDARKRDEKNDQSENLREGNFDYSVMSKFYGVGLFDNASKFV 226

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
               D      +  ++ ++      +      IDY +   N     I             
Sbjct: 227 GTGNDRISFPTQVFRKTETDKKKLIDRGT--RIDYILTSYNLVNQCIDTKI--------Y 276

Query: 285 IKSRGKRLSDHCPISIDY 302
                  LSDH P+   +
Sbjct: 277 NGPEAYFLSDHYPVESSF 294


>gi|330965675|gb|EGH65935.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 291

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 82/292 (28%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   +       D D+V L
Sbjct: 30  PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHVGRAGNLQKIGDLIN--DFDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +        +         R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFVNQVEHLAQLGSFPFWYQQLNRNLGRFAQHSNGVLSRLRPTRIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAHPI--------------SDHLPVAVEI 271


>gi|225708354|gb|ACO10023.1| Deoxyribonuclease gamma precursor [Osmerus mordax]
          Length = 318

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 85/286 (29%), Gaps = 33/286 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YNAV 80
           VR+ ++N+    E         S  +       L +       D+  LQE+         
Sbjct: 23  VRICAFNVQGFGE---------SKAQNPKVMHTLVRIIARC--DVCLLQEVRDQKKRALP 71

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A +   N +   +  + + +      +         R  +V V    Y    +      A
Sbjct: 72  ALLESLNRYDPDHDYQYVASEPLGRKSYKEQYVFVYRTGSVAVT-GQYQYPDSLPGDEDA 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +R    +  +     +    +  +     ++            +++   L D     K+
Sbjct: 131 FSREPFVVRFKAPSTALGEFVLIPQHTSPSNA------------TREIDALYDVFQAVKK 178

Query: 201 --SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    +  GDFN    Y+   +     +  + S +    +K+              I 
Sbjct: 179 RWNTEMVMFLGDFNADCGYVAKKNRVKVRLYSDPSFLWLISDKEDTTVRASTSCTYDRI- 237

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             V      + ++  S     ++++   S  + L  SDH P+ +  
Sbjct: 238 -VVHGSEFSRGIVPYSAKPFNFDKEYQLSEEQALEVSDHYPVEVVL 282


>gi|15672926|ref|NP_267100.1| hypothetical protein L169897 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12723881|gb|AAK05042.1|AE006329_1 unknown protein [Lactococcus lactis subsp. lactis Il1403]
          Length = 352

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 55/316 (17%)

Query: 21  AQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            Q  +++++NI               G  +   S     S      +       D   +Q
Sbjct: 56  GQTYKMMTFNIGYGSYPPSFNFFMDGGDDVRAYSKSAVKSAIQEDIRLINKEKPDFGNIQ 115

Query: 73  EMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRDSNNDI---HTAIAVRKKNV 121
           E+      ++   +          +    +      +        I    + I    K  
Sbjct: 116 EIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAYLFYPVTKPIGKAKSGIMTYSKYE 175

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 Y L    +        RA  + +   + + KK  + + HL +F           
Sbjct: 176 IESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDKKFVIFNTHLSAFITDQ------- 228

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPND 232
               +  QQ   L D + +        +   D+N  +    + +  W      + +    
Sbjct: 229 ---KIQKQQLLTLFDEMKKYVSKGDYVICGADYNHALAGKAHPELTWMKEFPTENLTKGM 285

Query: 233 SLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            ++        R       +         ID F++  N     IQ               
Sbjct: 286 RVVAPTNAPTVRSLDYAYDKKNPKNTFGIIDGFLVSNNIKDLKIQ------------TID 333

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+ +D+ 
Sbjct: 334 NQFKSSDHQPVVMDFS 349


>gi|291241198|ref|XP_002740507.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral-like
           [Saccoglossus kowalevskii]
          Length = 517

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 74/299 (24%), Gaps = 41/299 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++L++ N                 K        + +     D D+V LQE+ S      
Sbjct: 129 KLKLLTLN---------CWAIPFLSKLRKERIRHIGEEISTRDYDVVCLQEVWSSKDFKS 179

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +          S      +            +  +     +    Y   G    +     
Sbjct: 180 LKDM------LSDCLPYAYQFHSGVVGSAICVFSKSPITEMFYHKYSANGLPHFWHPGEW 233

Query: 143 RRAVEL---LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                +    +  +G KI +   HL      +          +    QA  L  +I    
Sbjct: 234 LTGSMVGLCRIIHHGIKINIYVTHLH-----EETNAIKKYYYAHRLIQAYELSQFIKFTT 288

Query: 200 ESLVPF-VIAGDFNRKINYLGNN----------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
                  V+ GDFN + +  G                +    N+          S     
Sbjct: 289 SESSDVNVLMGDFNTEQHEGGYELICKLIEMNDSWITQQSKANEHSAGITCVSPSNPFTI 348

Query: 249 KN----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +      N   IDY   + +    +     +  +        +    SDH  ++   +
Sbjct: 349 PDELKMWPNGARIDYIFYNSSQRYDVKCIETNVTMTKV---PGKDYSYSDHEGVATTLE 404


>gi|146413308|ref|XP_001482625.1| hypothetical protein PGUG_05645 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 308

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 91/313 (29%), Gaps = 31/313 (9%)

Query: 3   RKYVLALVFFLVPCTASVA------------QKVRLVSWNINTLSEQEGVSLWKNSVKRT 50
            K++ A +  LV   A+                 R+ S N+   +E+      +   +R 
Sbjct: 1   MKFLFAQILLLVSAVAAQPVQWSDLETRDTDLAFRIYSNNVREYTEK-RFPDERPWDERK 59

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNND 109
                 L     +    +V LQE+     V  +   N               +       
Sbjct: 60  YGVIEALNSRIHDF-PTLVGLQELKHNQLVDVLAGLNGQNQTEFPWAHYGVGRDDGVEKG 118

Query: 110 IHTAIAVRKKNVRVLQQSY----PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
            ++AI        +L  +Y    P          AG+RR V +    N +    ++    
Sbjct: 119 EYSAILYNTLEWDLLNGTYKWLSPTPDVPSYGWDAGSRRIVTMTTFRNKQTGTKVNYFNT 178

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                       + S     +  + +  W+ Q   +  P  + GDFN   + +       
Sbjct: 179 HL---------DNKSEQSRQESTKLIVGWL-QLIPNDYPQFLLGDFNSIASDIAYETVAD 228

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
              D N          ++     +   ++  ID+     N+ K   +     + Y     
Sbjct: 229 YMADTNVIANIHETGNETTYTGFEYGDHQSVIDFIWAPSNSNKP--KSGVEVVGYEVLSN 286

Query: 286 KSRGKRLSDHCPI 298
                R SDH P+
Sbjct: 287 NYLDFRFSDHRPV 299


>gi|302552034|ref|ZP_07304376.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736]
 gi|302469652|gb|EFL32745.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736]
          Length = 274

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/311 (10%), Positives = 76/311 (24%), Gaps = 71/311 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+ + + S N+N L                        ++    +AD++ LQE+      
Sbjct: 6   ARVLTVTSVNVNGLRAAAKKGF---------------VEWLGQTEADVLCLQEVR----- 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                +      +       H             +++  +      Q        D   R
Sbjct: 46  ----AEPEQLPEHVRTPEGWHVTHAPAAAKGRAGVSLYTRREPDRVQVGFGSEEFDGSGR 101

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                   +  ++ G  + V  ++L S       ++             + L++      
Sbjct: 102 -------YVEADLPG--VTVASLYLPSGEVGTERQDEKERFMGEFLAHLKGLRERA---A 149

Query: 200 ESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTID--PNDSLIRFPKEK 241
                 ++ GD+N                         +   + +D      +       
Sbjct: 150 AEGREVLVCGDWNIAHQKADLKNWRGNQKNSGFLPEEREWLGRVLDPADGGYVDVVRALH 209

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           ID  V         ++          +   S  +R 
Sbjct: 210 PDTEGPYSWWSYRGRAFDNDSGWRIDLAVATPRLAARAVKA-------VVERAASHEERW 262

Query: 293 SDHCPISIDYD 303
           SDH P+++ ++
Sbjct: 263 SDHAPVTVVFE 273


>gi|94967527|ref|YP_589575.1| endonuclease/exonuclease/phosphatase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94549577|gb|ABF39501.1| Endonuclease/exonuclease/phosphatase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 246

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 84/282 (29%), Gaps = 47/282 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N++     +             +D   +    + LDAD++ +QE+         
Sbjct: 3   LRIATYNVHKCRGLDR-----------RTDPERIATVIRELDADVIAMQEILDVRDGHPG 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +         E      +  S +          +      ++Y +      +     R
Sbjct: 52  HDQARRIATNLQEYEWRFGENRSLHGGAYGNMTLSRLPITASENYDIT-----WRHRERR 106

Query: 144 RAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-QWLKDWITQKKES 201
             +   V +  +  + + ++HL               S      QA + L + + ++ E 
Sbjct: 107 GCLRTDVSLTDRSVLHLFNLHLG-------------TSFVERRHQARKLLTEAVLRRAEF 153

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++ GDFN               +   +     P+           +   + +D+F 
Sbjct: 154 TGPRIVLGDFNEWT------RGLASRLMGTEFEAIEPRTHLRYARTYPGVMPLLHLDHFY 207

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            D+        ES+                 SDH P+  ++ 
Sbjct: 208 FDRTLS----LESYCIHR------SRTALIASDHLPLVSEFS 239


>gi|89071355|ref|ZP_01158492.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola
           granulosus HTCC2516]
 gi|89043144|gb|EAR49387.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola
           granulosus HTCC2516]
          Length = 232

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 85/283 (30%), Gaps = 57/283 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81
            +RL S+NI      +              D   + Q  +  DAD+V LQE+        
Sbjct: 2   TLRLASYNIRKCLGTDR-----------RRDPHRILQVLRQADADVVALQEVDMRLGPRP 50

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
              P+           L   + + S       I +R+    + +   PL G         
Sbjct: 51  AALPRALVEAETDYAPLALVTSKSSLGWHGQTILLRRGLRILSEARVPLPGL-------E 103

Query: 142 NRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R AV + VE  G+  I V+ +HL                     +Q + +   +     
Sbjct: 104 PRGAVLVEVEDPGRGPIRVVGVHL-------------GLLRRDRLRQIRAILSALR--AR 148

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             +P  I GDFN      G      +  +P   +        +   +    R  + +D  
Sbjct: 149 GPMPAAIMGDFNEWSEARG-----LQGFEPPWEVH-------TPGPSFHARRPMLALDRI 196

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           V+             + +           +R SDH PI  +  
Sbjct: 197 VLGPGLALQRSGVVATALS----------RRASDHLPIWAEVT 229


>gi|332654136|ref|ZP_08419880.1| exodeoxyribonuclease III [Ruminococcaceae bacterium D16]
 gi|332517222|gb|EGJ46827.1| exodeoxyribonuclease III [Ruminococcaceae bacterium D16]
          Length = 252

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                           +    D   LQE       A V
Sbjct: 1   MKLISWNVNGLRACLKKGFLDFY---------------QEQKPDFCCLQETKMEQGQADV 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++++     +S        H  +AVR              G          R
Sbjct: 46  DLGENMLEYWNSAEKKGYSGTAVFTP-HQPLAVRY-------------GMGKEEHDHEGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +K +++  +  +         +         +    L+ ++ +  + + 
Sbjct: 92  L-----ITLEYEKFYLVCCYTPN-------SQSELKRLDYRMEWEDDLRAYLME-LDKVK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                         +   T+  +     F           
Sbjct: 139 PVIYCGDLNVAHREIDLKNPKTNRMNAGFTDQEREKMTTLLSSGFTDTFRFLYPDLEGVY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++       + +      +             SDHCP+ 
Sbjct: 199 SWWSYRFQARKKNAGWRIDYFIVSDRLQNAIKRAEILTQV-----------EGSDHCPVL 247

Query: 300 IDYD 303
           ++ D
Sbjct: 248 LELD 251


>gi|257463185|ref|ZP_05627585.1| hypothetical protein FuD12_04976 [Fusobacterium sp. D12]
 gi|317060775|ref|ZP_07925260.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12]
 gi|313686451|gb|EFS23286.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12]
          Length = 274

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 94/303 (31%), Gaps = 42/303 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++ +   L+FF +   AS+AQ+  + ++N+  L E                D+  + +  
Sbjct: 1   MKFFYPYLLFFCLSI-ASLAQEAYIATFNVLKLGESP-------------KDFETIAKTM 46

Query: 62  KNLDADIVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            +   D+V L+E+ +   + ++    N +  +     +            + A   +K  
Sbjct: 47  NHF--DLVGLEEVITPEGLERLVKSLNKYTNYTWDYHISPFPVGTRKYKEYYAYVWKKDK 104

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V+ L         +    +   R       +I      ++  H                 
Sbjct: 105 VKFLASEGFYPDKE----KLFIREPYGASFQIGNFDFTLVLQHAVYGKSETER------- 153

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRF 237
               +     +  +   +       +I GDFN       +    +D  + I   D  I+ 
Sbjct: 154 -RAEAFHLIKVYRYFQDRDRKENDILIGGDFNLSAFDEAFSPLYEDKDQIIYGIDPNIKT 212

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                   N+          D   + +   +    +S +   +   D K    ++SDH P
Sbjct: 213 TIGMKKMANSY---------DNIFLSKIYTQEFTGKSGAVD-FTNRDYKVMRNKVSDHLP 262

Query: 298 ISI 300
           + I
Sbjct: 263 VFI 265


>gi|86741914|ref|YP_482314.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
 gi|86568776|gb|ABD12585.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
          Length = 385

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 81/277 (29%), Gaps = 29/277 (10%)

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
           +     +      Q   +++AD++ + E  +  A+ +        ++     +  +    
Sbjct: 118 TGPVDETAIRSTAQVITDINADVLAVIEAENRPALVRFNTSLLAGLYAHVMLVDGND--- 174

Query: 106 SNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIH 163
               I   +  +  +    +                 +R      +    G  IWVL  H
Sbjct: 175 -PRGIDVGLLAKPGHTIGSIVSHVDDPDPARPDRPLFSRDCPAYELHTPAGNTIWVLPNH 233

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFN--RKINYLGN 220
           LKS  +     +       L  +QA  + +  T  +++   ++ + GD N      +   
Sbjct: 234 LKSQSWTSGNPD------PLRRRQAHRVAEIYTALRDAGARYIAVVGDLNKPPPPAFPSL 287

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                      D+  R   +   R    ++   +  +DY ++  +    +          
Sbjct: 288 EPLLGPDSPLVDAASRAGFDTGPRPGTFQSCTARNRLDYILLSPDLADRMTGGQIVRTGL 347

Query: 281 NED--------------DIKSRGKRLSDHCPISIDYD 303
             D               I    +  SDH  + +D D
Sbjct: 348 WGDPDNKHPSAQWVIHPKITRADQAASDHAALYVDLD 384


>gi|296414217|ref|XP_002836799.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295631638|emb|CAZ80990.1| unnamed protein product [Tuber melanosporum]
          Length = 610

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 90/331 (27%), Gaps = 65/331 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEM 74
           + S    +    +N+  L+              +++    +  +        D VFLQE+
Sbjct: 298 SGSTCSGLTFGCYNVENLAL-------------SSAHLPQVADHIVTYMGTPDFVFLQEV 344

Query: 75  GSYNAVAKVFPKNTWCI-----------------FYSTERLINHSKRDSNNDIHTAIAVR 117
              +        ++                    F   + +          +I  A    
Sbjct: 345 QDDDGSNNSGNVSSNQTLAALSAAIRDRSGVSYEFAVIDPVDGMDGGQPGGNIRVAYFYN 404

Query: 118 KKNVRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIW 158
            +   V                    +  P      + +   +R+ +  + +   G K++
Sbjct: 405 PEFFTVRNPNPGSSTEATEVLPGLELKFNPGRIDPVNVAWTNSRKPLAAVFDTGDGDKVF 464

Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFN 212
           V+++H  S     S+++   P      +    QA+ +  ++++          +IAGDFN
Sbjct: 465 VINVHFTSKGGSSSIQSDARPPVNGGLADRQAQAESVASFVSKILAEDRTAKIIIAGDFN 524

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                           D    L                  N   +D+ ++     +    
Sbjct: 525 EFTYVSPMRAFDGIAYD----LDVVTSTPVEERYTYLFDMNSQQLDHMLVSYEITQR--- 577

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   + +   +    +SDH P     +
Sbjct: 578 -DPEYEHVHINTWNTLEGEVSDHDPSVAKLN 607


>gi|322417960|ref|YP_004197183.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
 gi|320124347|gb|ADW11907.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
          Length = 346

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 86/310 (27%), Gaps = 84/310 (27%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
             +    +R+++WNI                     D   L +  +    DIV  Q+   
Sbjct: 91  AEASGATLRVMTWNIKY----------------GKRDLMPLIEELERSRPDIVLFQDAVR 134

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                    +     + S  +L +             +A R     V   + P    K  
Sbjct: 135 -------AGEGPLVDYLSGWQLESRG--------QYLVASRYPISAVEVHALPSRDRKKE 179

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------SCS 182
                    +   V +  ++I + ++H K+     +                     +  
Sbjct: 180 TF-------LRCRVRVGSREISLYNVHFKTPRRSLNAFRKAKRGAWYIPKAIDRFEGNVE 232

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
               QA+ + +++         F++AGDFN       ++    +T+        F +   
Sbjct: 233 TRLLQAERVAEYLG---RERGDFLVAGDFN-----SPDHSLVCETLRKTGMTDAFAEAGR 284

Query: 243 SRCNANKNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +  +            + + ID+ +                      + +   +R 
Sbjct: 285 GYGYSYGHFLLKDRIPYLRASWMRIDHIMTSAGLRAR--------------NCRVGTRRA 330

Query: 293 SDHCPISIDY 302
           SDH P+  D+
Sbjct: 331 SDHRPVIADF 340


>gi|300776178|ref|ZP_07086037.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300505311|gb|EFK36450.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 311

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 84/311 (27%), Gaps = 47/311 (15%)

Query: 29  WNINTLSEQEGVS----------LWKNSVKRTTSDYTLLRQYAKNLDAD------IVFLQ 72
           +N+  L   +             L     KR  +    +    + +  D      ++ L 
Sbjct: 7   YNVENLFLPDPKPVHKLDPTRSGLRNWDEKRYRNKLFKISHVFQLMKEDNGVLPFMIGLS 66

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+     +  +     +   Y      +  +R  +     A+   K  V V+        
Sbjct: 67  EVSGRKVLEDLVEMEPFNSEYGIVHYNSMDERKVD----VAMLYDKNKVEVIDSETITFF 122

Query: 133 AKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            +            R  +   ++  G+ I V   HL S    D  +   +   + +    
Sbjct: 123 FEIVNKNTENYDTTRDVLFSKIKYKGEIINVFIAHLPSKREKDINKPKRAFILNEIR--- 179

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              +  +          ++ GDFN   +        +        +  F +   +R  + 
Sbjct: 180 ---QRIMKIVDADKEHVILCGDFNENPDDENLVQILYDNEHEKVLVNPFQQLFSTRNYST 236

Query: 249 KNLRNKIPIDYFVMDQNAYK-----------------FLIQESFSEILYNEDDIKSRGKR 291
            + ++ +  D  +M ++                         +F    +           
Sbjct: 237 FHYKSGLLYDQIIMSRSLLDNKTLAFQDAHIFNSEKIRSRTRNFEGRPFRTYAGTRYLGG 296

Query: 292 LSDHCPISIDY 302
            SDH P+ + +
Sbjct: 297 YSDHFPVFVKF 307


>gi|328773337|gb|EGF83374.1| hypothetical protein BATDEDRAFT_9186 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 580

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/333 (11%), Positives = 87/333 (26%), Gaps = 45/333 (13%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
               + ++ + ++ +N      +  +  +   +          L+ Q   N +ADIV LQ
Sbjct: 232 SSNKTASESITIMCYNTLCQKYATPQSYAYTPSWALSWEYRRDLILQDILNYNADIVCLQ 291

Query: 73  EMGSYNAVA----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           E+           ++     +   +  +             +     + K     + + +
Sbjct: 292 EIDMGQFEDYFKVQLAHLADYEGVFYPKSRSKTMNEYERRQVDGCATLFKTTKFRMLEKF 351

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------YSPSCS 182
                  +  R   R++ ++L  +  K    +  +L+     D L             C 
Sbjct: 352 NAEFQTIAMQRPDLRQSQDVLNRVMVKDNIAVMTYLEHIGSGDRLMIANAHLHWDPAYCD 411

Query: 183 LLSQQAQWLKDWIT------------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTID- 229
           +   Q   + + +             + K+  V  ++ GD N               +  
Sbjct: 412 VKLIQTAMMIEEVERLLSVWQKTHRTEGKQPTVSTIVCGDLNSLPQSGVVEFLSQGHVSA 471

Query: 230 PNDSLIRFPKEKDSRC-------------------NANKNLRNKIPIDYFVM-DQNAYKF 269
            +D +  F  E  S                       N        IDY      +    
Sbjct: 472 DHDDIKAFNYEPYSNGGLTHKLSLKSAYSHVDVMDFTNFTPTFCGVIDYIWYTTNSLSVA 531

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +          +          SDH P+ +  
Sbjct: 532 GLLSHVDRDYVAKSVGFPNAHHPSDHIPLVVSL 564


>gi|296214367|ref|XP_002753758.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
           [Callithrix jacchus]
 gi|296214369|ref|XP_002753759.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
           [Callithrix jacchus]
          Length = 318

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 73/311 (23%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                      K    +         +    S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE------NKLPAELQELPGLPHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|289674481|ref|ZP_06495371.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae FF5]
          Length = 269

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 80/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      +    +     +          +   +         D+V L
Sbjct: 8   PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLINEF--DLVAL 65

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 66  QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 125

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 126 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 165

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 166 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 211

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 212 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 249


>gi|148975587|ref|ZP_01812458.1| hypothetical protein VSWAT3_03466 [Vibrionales bacterium SWAT-3]
 gi|145965015|gb|EDK30266.1| hypothetical protein VSWAT3_03466 [Vibrionales bacterium SWAT-3]
          Length = 347

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 90/339 (26%), Gaps = 59/339 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +V   ++N+    E            S          + +  ++ D D++  QE+ S 
Sbjct: 4   PNQVTFSTFNLLNYLEPPNAYYDFENIYSFDEWQKKQHWIAEAIRSTDCDVIGFQEIFSP 63

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAK 134
            ++ ++  +  +  F   +                 I+ R     V   +     L    
Sbjct: 64  ESLQQLMNELGYPYFAVVDSAHVEDDYL-YTSPVVGISSRYPIESVQPVTPDSSLLAAFN 122

Query: 135 DSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ---- 187
              + + NR  +   +E+        +V+    +            S S S    Q    
Sbjct: 123 LGDNFSFNRTPIHATIELPHLGSTDCYVVHFKSQRPTEPKVEPIKTSDSSSEQKPQSDTL 182

Query: 188 --------------------AQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
                               A+ L  +I  Q+  S  P V+ GDFN+ +           
Sbjct: 183 IKLHQEQLGSWLSSVQRGLEAKLLHQYITNQRYLSDQPVVLMGDFNKPLFNNEFKGLLSY 242

Query: 227 TIDPNDSL-IRFPKEKDSRCN-----------------ANKNLRNKIPIDYFVMDQNAYK 268
           +++ +++        +                       +    +   +DY +M      
Sbjct: 243 SLNRDETSQHWLSHFRLRDSWDLYHQLHEEDLLEQRKPTHYYGASGSVLDYILMSNEFDC 302

Query: 269 FLIQESFSEILYNEDD------IKSRGKRLSDHCPISID 301
                      Y   D           +  +DH  +S+ 
Sbjct: 303 QNSSSLMEISNYTVLDHHLINPSFEHDQFSTDHAVVSVT 341


>gi|294817222|ref|ZP_06775864.1| Putative endonuclease/exonuclease/phosphatase family protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|294322037|gb|EFG04172.1| Putative endonuclease/exonuclease/phosphatase family protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 310

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 86/301 (28%), Gaps = 51/301 (16%)

Query: 8   ALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           AL    +P  A   A   R+++WNI            +++  R                 
Sbjct: 39  ALFARSLPVEAPRDAVPNRVMTWNICN-------PCKESNASR--------AAEIARYAP 83

Query: 67  DIVFLQE--MGSYNAVAKVFPKNTWCIFYSTE----RLINHSKRDSNNDIHTAIAVRKKN 120
            ++ LQE  +     + +        +++       +                 A+    
Sbjct: 84  QVIGLQEACVRDVEWIRQYLKSRYGLVYHVEYGTVLQHQGRCGGLPWRPGAFGQALLSAA 143

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                +S            + +R  + +   + G+ + V + HL                
Sbjct: 144 PMTDHESVEYPDGG-----SEDRGYMAVTTTVGGRSVRVFNTHL-----------AQRRQ 187

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            ++ + Q + L   + + + +    ++ GDFN   N       +   +  ++     P  
Sbjct: 188 EAVRADQTRVLAAAVARHERA----IVLGDFNAVPNAPELTRIW--ELSADEKSPCGPSS 241

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQ----NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             + C    + +     DY  +           L   S   +++ +       + +S H 
Sbjct: 242 A-ADCEPTTDWQL--TFDYIFLRGMAPVEHGVHLTSYSDHHLVHTDVGAPGPTRPVSTHA 298

Query: 297 P 297
           P
Sbjct: 299 P 299


>gi|239624599|ref|ZP_04667630.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520985|gb|EEQ60851.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 251

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 73/300 (24%), Gaps = 78/300 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +SWN+N L    G                    + K +DAD+  +QE           
Sbjct: 3   KFISWNVNGLRACVGKGF---------------LDFFKEIDADVFCIQESKLQEG-QIDL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++      +          +  A+  +   +       +   D+  R     
Sbjct: 47  DLPGYHQYWNYALKKGY----------SGTAMFTREEPLSVSYGIGMEEHDTEGR----- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++       +V+  +  +     +  +             + L+           P
Sbjct: 92  ----VITAEFPDYYVVTCYTPNSQDGLARLDYRMKWEDDFLAYLKGLEK--------KKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            V  GD N                           +  +     +  F            
Sbjct: 140 VVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKFTDLLSAGFIDTFRYFYPDAEGIYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + ++    L+  +    +             SDHCP+ +
Sbjct: 200 WWSYRFSARAKNAGWRIDYFCVSESLKDRLVSAAIHTEV-----------MGSDHCPVEL 248


>gi|160876625|ref|YP_001555941.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS195]
 gi|160862147|gb|ABX50681.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS195]
 gi|315268822|gb|ADT95675.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS678]
          Length = 398

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/366 (12%), Positives = 92/366 (25%), Gaps = 88/366 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +++ S N+    E            S  +       L ++  +   DIV  QE+ S   +
Sbjct: 30  IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGFQEVFSPEPL 89

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
            ++  +    + ++                  A+A R   V +         +     S 
Sbjct: 90  KRIASEQG-LVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSS 148

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176
             A +R+ +   VE+    K     +H KS     +LE                      
Sbjct: 149 EFAFSRKVLRATVEVPHIGKCDFYVVHFKSKRAGLALEPKLFEHQPLALDNLAPAASMKL 208

Query: 177 -------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRKI------- 215
                           S      +A  L    + +++ES  P ++ GDFN  +       
Sbjct: 209 HSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQESKHPVIVMGDFNDSLTMGALDA 268

Query: 216 --------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN--------------------- 246
                   +           +        F + +                          
Sbjct: 269 LTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELCLEANQQDSLTGNTAYHRD 328

Query: 247 ----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHC 296
                +        +DY ++         +     + Y   D         R    +DH 
Sbjct: 329 HRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHA 388

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 389 PVIVEL 394


>gi|154275224|ref|XP_001538463.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150414903|gb|EDN10265.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 769

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/358 (11%), Positives = 89/358 (24%), Gaps = 75/358 (20%)

Query: 22  QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +K   +S+N      +  +      +          L+    K  +ADIV LQE+   + 
Sbjct: 384 EKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 443

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++     +              K + + +         
Sbjct: 444 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 503

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++      ++G+++ V+++HL        ++   +  
Sbjct: 504 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 563

Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207
                 Q       I    +                                    P +I
Sbjct: 564 LMEEVTQLAEKYSKIPACTDKTAFRFSEPEHSTDGGGTATPVEPAPSVEYSSGSQIPLII 623

Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247
            GDFN                  ++       +  +        F  +            
Sbjct: 624 CGDFNSYPGSAVHELMSRGRLIEDHPDLEKRLYGNLSRVGMSYPFNLKSAYGAIGELDFT 683

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304
           N        IDY     NA +        +  Y +           SDH  +  ++ F
Sbjct: 684 NYTPDFADVIDYIWYTSNALQVTGLLGAVDKEYLQRVPGFPNYHFPSDHLALMAEFSF 741


>gi|119946323|ref|YP_944003.1| endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
 gi|119864927|gb|ABM04404.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
          Length = 1010

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/376 (11%), Positives = 95/376 (25%), Gaps = 94/376 (25%)

Query: 20  VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               + + ++N+ N  + Q G         R            + +      ++ADI+ L
Sbjct: 468 QDGDLTIATFNVLNYFNSQLGGEPNPLDQNRGAESAEEFDRQASKIVTAIVAINADILGL 527

Query: 72  QEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            E+ +             N +               +     +    ++ I + I  +  
Sbjct: 528 MEIENNGFGESSAIIDLLNRLNANLDDTNQYSIAQPQTEDLTNGFVGSDAITSQIIFKAS 587

Query: 120 NVRVLQQS--------------YPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIH 163
            V +                  Y    ++        R A+     I G  +K+ +   H
Sbjct: 588 KVSLETVRIIKMPEQHATPVTVYIDGQSETESGDNYMRDAITPTFSIAGSDEKLTISVNH 647

Query: 164 LKSFCFLDSLENTYSPS---------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           LKS       +                +L    A  L + +   + +    +I GD N  
Sbjct: 648 LKSKGSPCWEDYKLQEGKDPDKQGSCENLRVSAAYQLGETMKNIEGNK---LIMGDLNSY 704

Query: 215 INYL---------------------------------GNNDDFWKTIDPNDSLIRFPKEK 241
            N                                     + D    +  +       +++
Sbjct: 705 ANEDAIMVLTNRDNAPADYQLKAARNTYIGGPDGEGVELHGDAGAIMTESYGYANVIRDR 764

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------- 288
               ++         +DY +   +    ++   +  I  +E  +                
Sbjct: 765 HPESHSYSYNDEVGTLDYILASASLKDKIVDSMYWNINSSESSLFEYSTKYTGYLPKYDN 824

Query: 289 GKRLSDHCPISIDYDF 304
             R SDH P  +  +F
Sbjct: 825 AYRSSDHDPAIVVLNF 840


>gi|254780031|ref|YP_003058138.1| exodeoxyribonuclease III [Helicobacter pylori B38]
 gi|254001944|emb|CAX30201.1| Putative exodeoxyribonuclease [Helicobacter pylori B38]
          Length = 250

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                     + +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|301113758|ref|XP_002998649.1| transmembrane protein, putative [Phytophthora infestans T30-4]
 gi|262111950|gb|EEY70002.1| transmembrane protein, putative [Phytophthora infestans T30-4]
          Length = 493

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 92/299 (30%), Gaps = 31/299 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YNA 79
           K+R++S N   L              + T     +     + D ++V LQE+      N 
Sbjct: 45  KLRVLSLNAWGLP----------VAPKCTERAAKIASAISS-DFELVVLQEIWHMRERNI 93

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAK 134
           V     K+ +  ++     +        +   T + V  K        +         A 
Sbjct: 94  VISKAQKSGFHYYHYFNPAVGFPFPMGADSFGTGLLVLSKLPISNALYHSFSLSGRPYAL 153

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  N+    L VE    +I V   HL +   +              + Q+  L  +
Sbjct: 154 HESDFVANKGVGLLRVETPAGQIDVYVTHLLANYNVGGKPGPGDFYRGHRTGQSYELTQF 213

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEK-DSRCNANKNL 251
           I+    + +  ++ GDFN   + L            D              S  N   + 
Sbjct: 214 ISATNRNDLT-IVCGDFNSSPDCLELKVPKQLLSLRDAYTDTNDEDGLTFASPDNKYSHG 272

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEIL----YNEDDIKSRGKR--LSDHCPISIDYDF 304
            + + +DY +      K    +S   +     +      +RG++  LSDH  +  ++ F
Sbjct: 273 EHPMRMDYVMY--KIEKRAKGDSDWHLEGSSIFKGFFTDARGEKTPLSDHFGVKAEFTF 329


>gi|226322793|ref|ZP_03798311.1| hypothetical protein COPCOM_00565 [Coprococcus comes ATCC 27758]
 gi|225208774|gb|EEG91128.1| hypothetical protein COPCOM_00565 [Coprococcus comes ATCC 27758]
          Length = 231

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/268 (10%), Positives = 67/268 (25%), Gaps = 63/268 (23%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            + K  DADI  LQE         V     +  ++++     +          +  A+  
Sbjct: 2   DFFKEADADIFCLQETKMQEG-QLVLDLPEYHQYWNSAVKKGY----------SGTAIFT 50

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +       +   D   R         ++ +  +  + + ++  +     +  +   
Sbjct: 51  KKEPLSVTYGLGIEEHDQEGR---------VITLEFEDFYFITVYTPNSQSELARLDYRM 101

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDD 223
                     + L++          P +  GD N                          
Sbjct: 102 TWEDAFLAYLKKLEE--------TKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERA 153

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQES 274
            +  +     +  +      +         +           IDYF   +     L    
Sbjct: 154 KFSALLDAGFIDTYRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFCTSKALESRLEDAK 213

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ++            SDHCP+ +D+
Sbjct: 214 ILTNVF-----------GSDHCPVELDF 230


>gi|126277963|ref|XP_001379263.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair
           enzyme) 1 [Monodelphis domestica]
          Length = 385

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 79/311 (25%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 120 TSPSGKSSTLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 164

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                 +K+ P+       + +   +     S+ + ++ + +  +   +        G  
Sbjct: 165 KCSE--SKLPPELQDLPGLTYQYWSSP----SDKEGYSGVGLLSRQCPLSVT----YGIG 214

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V        +   ++  ++ +                   +  + L   
Sbjct: 215 EEEHDQEGRVIVA-----EFEAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGL--- 266

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 +  P V+ GD N     +   +                 F + +        F 
Sbjct: 267 -----SAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFR 321

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                   A                  +DYF++ Q     L                   
Sbjct: 322 HLYPEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQALLPALCDSKIRSKAL--------- 372

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 373 --GSDHCPITL 381


>gi|17545927|ref|NP_519329.1| hypothetical protein RSc1208 [Ralstonia solanacearum GMI1000]
 gi|17428222|emb|CAD14910.1| probable metal-dependent hydrolase protein [Ralstonia solanacearum
           GMI1000]
          Length = 289

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 87/306 (28%), Gaps = 54/306 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGS-------- 76
           +++WNI      +G             D + +   A+ + + D++ LQE+ S        
Sbjct: 5   ILTWNIQWGRGADG-----------RVDLSRMLAEARAMGSFDVLCLQEVTSGFGHLPGQ 53

Query: 77  --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +   ++         ++    I   + +         A+  +   +    + L    
Sbjct: 54  PGEDQWQELAGALGQA--FTLIDGIALERHEGAQIRRFGNAIATRLPVLHVARHALPCPA 111

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D+      R A+E +V+     + V+  HL+ +     +    +     +    +     
Sbjct: 112 DA-GPTMPRMAIEAIVQAPFGPLRVVSTHLEYYSETQRIAQIDALRALHVEGCMRAAHPP 170

Query: 195 ITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               + +  PF         VI GDFN K +                +L    +      
Sbjct: 171 TLGPEPTDGPFRPLAQTRATVICGDFNCKPDSKPKRLATVPFSHEAAALYDAWETAHGPT 230

Query: 246 NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                                D+ ++ +     + +   +              + SDH 
Sbjct: 231 PQPPTFGVHDRTGWTEPAYACDFMLVSEPLKTRVTRVEVNSTT-----------QASDHQ 279

Query: 297 PISIDY 302
           P  ++ 
Sbjct: 280 PTLLEL 285


>gi|329964252|ref|ZP_08301353.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328525557|gb|EGF52600.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 369

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 92/337 (27%), Gaps = 77/337 (22%)

Query: 3   RKYVLALVFFLVPCTA-------------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           R  +L L+ FL+  +                    +L+S+NI      +G +        
Sbjct: 68  RSALLPLMGFLLCYSQIRTYLPINFRTDNPPEGSFKLLSYNIMGF---DGATRKDGKNP- 123

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  +  Y K   ADI+ LQE  +  +   +  K+      +      H+       
Sbjct: 124 -------ILTYLKESGADILCLQEYATGGSSHHLSQKDVNLELKAYPYHRIHT-VGRGKG 175

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--- 166
               IA   K   +  +                  +V   V+I G  + +++ HL+S   
Sbjct: 176 HTNRIACYSKFPILSARILNYPS--------EYNGSVIYEVKIGGDTLTLINNHLESNKL 227

Query: 167 --------------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
                                  +  L    + + ++ + QA  +   I          +
Sbjct: 228 TKADKVVYEDMLKSPEKEKVKSGVRLLIRKLAEASAIRAPQADTIAHEIA--ASRHPYII 285

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GDFN       ++    +  D       F +       +    +    ID  +  +N 
Sbjct: 286 VCGDFNDTPISYAHHTISRQLNDA------FTQSGRGLGISYNQNKFYFRIDNILTSRNL 339

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                           D         SDH PI     
Sbjct: 340 ---------RTHNCTVDRSIKD----SDHYPIWCYIS 363


>gi|255325807|ref|ZP_05366899.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141]
 gi|311740107|ref|ZP_07713940.1| exodeoxyribonuclease III [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|255297019|gb|EET76344.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141]
 gi|311304803|gb|EFQ80873.1| exodeoxyribonuclease III [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 269

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/294 (9%), Positives = 70/294 (23%), Gaps = 47/294 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   +            D D++ LQE    +     
Sbjct: 1   MRIATWNIN----------------SVRTRTQRALNLISKHDIDVLCLQETKVKDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                                    +    +A+  K                +      +
Sbjct: 41  ------KFPREVFEDAGLHVTCHGLNQWNGVAIVSKEEPEDVFIGFPGQPGFAKDPEKPQ 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDWIT 196
                 +    + + +  +++ +   +      Y           +    Q++ L     
Sbjct: 95  DREARALGARIRGVEIWSLYVPNGREITDRHYDYKLDFLYHLARYAENHAQSKLLMSGDF 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL----- 251
                         F  K +        ++ ++         +  + +     +      
Sbjct: 155 NIAPRDEDVWDIEAFRGKTHVTEPERAAFQMLEEAGLEEVTRRFTEDQRYTYFDYKGMRF 214

Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                + ID+ +      +              D ++  G + SDHCP+  DY+
Sbjct: 215 QKNEGMRIDFQLASAPLAQ-------HVTGAQVDMVERAGDKTSDHCPLLADYN 261


>gi|257452215|ref|ZP_05617514.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R]
 gi|317058758|ref|ZP_07923243.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R]
 gi|313684434|gb|EFS21269.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R]
          Length = 250

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 81/301 (26%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                        +Y +  DADI  LQE        ++
Sbjct: 1   MKLISWNVNGIRACLKKGFM---------------EYFEAQDADIFCLQETKCSAGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D   R    
Sbjct: 46  -DLKGYHQYWN----------YAVKKGYSGTAIFTKKEPISVSYGLGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +               L +          
Sbjct: 91  -----VITLEFEDFYMVTVYTPNSKNELERLDYRMIWEDEFRSYLAKLNE--------AK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +        F      R +A 
Sbjct: 138 PVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERTKFTELLKAGFTDSFRYLYPDRLHAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+  +  + + +                 +  SDHCP++
Sbjct: 198 SWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEIH-----------AEQEGSDHCPVA 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|254491940|ref|ZP_05105119.1| endonuclease/exonuclease/phosphatase family [Methylophaga
           thiooxidans DMS010]
 gi|224463418|gb|EEF79688.1| endonuclease/exonuclease/phosphatase family [Methylophaga
           thiooxydans DMS010]
          Length = 250

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 84/290 (28%), Gaps = 48/290 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              ++R++++N++                        +R      +ADI+ LQE+   ++
Sbjct: 2   SQNQLRILTYNLHKGFNTSN----------REFTLHPIRDALVATNADIMLLQEIQGAHS 51

Query: 80  VAKVFP-----KNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
              +       +  +    S       ++K    +  H   A+  K      ++  +   
Sbjct: 52  EHGLTHQHWPKEPHFEFLASDVWPHYAYAKNAVYSVGHHGNAILSKYPLQSWENINVSPF 111

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             +     +R  +   +++      +  I +                     +Q   L +
Sbjct: 112 TWA-----SRSLLHGEIKLPWSDDVLHIICIHLGLIG-----------MERRRQFVTLCE 155

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            I        P ++AGDFN             + ++  +    F    +       +   
Sbjct: 156 RIDAHVPHDAPLIVAGDFNDWAGQAEKR--LSQHLNLKE---AFRTLHNRYARTWPSWMP 210

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + +D                  E +  E    S   RLSDH P+   ++
Sbjct: 211 VLKMDRIYYRG-----------MEPIICERPPHSTWNRLSDHAPLLASFE 249


>gi|325189144|emb|CCA23669.1| conserved hypothetical protein [Albugo laibachii Nc14]
 gi|325190842|emb|CCA25330.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 291

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 75/291 (25%), Gaps = 27/291 (9%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                 ++++++N+   + ++G   W             +          I+  QE  + 
Sbjct: 17  PQPGMPLKIMTFNLRYANTEDGPRGWIYRK-------DHVIDIINRYHPAIMGTQEGLAD 69

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                          +  ER  N    +   D      ++  N  +     P       +
Sbjct: 70  QLDDIDKNLIHPYKRFGIEREPNGEHEEIFYDTSVVELIKGGNFWL--SETPDTFGTLGW 127

Query: 138 SRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                R       ++    +  +V +        +               + A+ L D I
Sbjct: 128 DADCVRLVTWCHFQLIETKQLFYVFNTQFDHVGAIS------------RQKAARLLWDRI 175

Query: 196 TQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                +       GDFN       Y     D    +  +       K  D  C  +    
Sbjct: 176 KTIAGTDAIVFTLGDFNTYRHDPTYKFFTQDEAGPMFQDAWTNATSKVGDVSCTYHAWEG 235

Query: 253 NKIPIDYFVMDQNAYKFLIQE-SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ++  V+  N   +L    +   +       +  G   SDH P+  + 
Sbjct: 236 PAYHLENGVVGANHIDWLFSRPNLKVLETKVITEERNGFHPSDHYPMQTEI 286


>gi|322806100|emb|CBZ03667.1| endonuclease/Exonuclease/phosphatase family protein [Clostridium
           botulinum H04402 065]
          Length = 327

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 101/311 (32%), Gaps = 44/311 (14%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               +V++NI               G     +S ++T  +   +  + K  ++  +FLQE
Sbjct: 28  DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQE 87

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127
           + + +   + F  + +    ++ +  + S   +       + + K +  V      L + 
Sbjct: 88  VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 145

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 +  +    +       ++    +  V   + +    ++S  + Y     +  QQ
Sbjct: 146 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENNRELVLINSHLSAYDKGGKIRKQQ 205

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236
             +LK++I ++ +     ++ GD+N  I               D   K  +    +    
Sbjct: 206 LSFLKNYIIKEYKKGNYIIVGGDWNHLILGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 265

Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID F++  N     ++       Y+ +   +    
Sbjct: 266 VADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNIEATSVKA------YSMEFKNT---- 315

Query: 292 LSDHCPISIDY 302
             DH P+ +++
Sbjct: 316 --DHNPVKMEF 324


>gi|302670430|ref|YP_003830390.1| endonuclease/exonuclease/phosphatase family protein [Butyrivibrio
           proteoclasticus B316]
 gi|302394903|gb|ADL33808.1| endonuclease/exonuclease/phosphatase family protein [Butyrivibrio
           proteoclasticus B316]
          Length = 362

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/315 (9%), Positives = 93/315 (29%), Gaps = 32/315 (10%)

Query: 16  CTASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
                 ++    +WNI               G  ++     R   + + + +    ++ D
Sbjct: 47  NPTVTGKEYTFATWNIGYGALGDNADFFMDGGKMVYSADESRVRENLSEIAKRVDAINPD 106

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            + +QE+   ++ +    +           +  +    + N   + + +      + +  
Sbjct: 107 FLVMQELDRNSSRSYFIDELERLKSEGESDVFKYQSSFAPNFNVSFVPL--PVPPIGRVL 164

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS---------LENTYS 178
                     +    R A+    +   +   +    L +   ++          L     
Sbjct: 165 AGETTYSSHETSLAERVALPCPFKWPLRTFNLKRCLLVTRYPVEESDRELVIINLHLEAY 224

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S      Q   LK+ +  +       ++AGDFN+  + +  +   +  ++         
Sbjct: 225 DSGEGKIAQTNMLKELMDNEVAKGNYIIVAGDFNQTFSNIDLSK--YPVLEGKWEAGIIN 282

Query: 239 KEKDSRCNANKNLR---NKIPIDYFVM-----DQNAYKFLIQESFSE---ILYNEDDIKS 287
            E  S   +            +D  ++        ++++ + +       I  N  +  +
Sbjct: 283 TEDFSSTFSFLYDDTYPTCRSLDRVLIDAEDKSPESFQYYMLDGCIVSDNIQVNHVETIN 342

Query: 288 RGKRLSDHCPISIDY 302
              + SDH P+ + +
Sbjct: 343 TEFKCSDHNPVVVKF 357


>gi|297157838|gb|ADI07550.1| putative exodeoxyribonuclease III [Streptomyces bingchenggensis
           BCW-1]
          Length = 265

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 77/306 (25%), Gaps = 71/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           + + + N+N L                         +     AD+V LQE+ +      A
Sbjct: 2   LTVTTVNVNGLRAAAKKGFLP---------------WLGGTAADVVCLQEVRAEPGELTA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V   + W   ++           ++      +AV  +      +        D   R  
Sbjct: 47  PVREPDGWHTVHAP----------ADTKGRAGVAVYTRREPEGVRVGFGSAEFDGSGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 L V++ G  + V  ++L S       +              + L++        
Sbjct: 95  -----YLEVDLPG--VTVASLYLPSGEVGTERQEEKERFMGEFLPYLKELRERA---AAG 144

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                             +  D    +    K      
Sbjct: 145 GREVLVCGDWNIAHREADIKNWKANRKKSGFLPEERAWLSRVYDEAAYVDVVRKLHPDAE 204

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           ID  V  Q   +  ++          +   S  +R SDH 
Sbjct: 205 GPYSWWSYRGRAFDNDAGWRIDLLVGTQGLAERAVKAQV-------ERAASYDQRWSDHA 257

Query: 297 PISIDY 302
           P++  +
Sbjct: 258 PVTAVF 263


>gi|85703387|ref|ZP_01034491.1| exodeoxyribonuclease III, putative [Roseovarius sp. 217]
 gi|85672315|gb|EAQ27172.1| exodeoxyribonuclease III, putative [Roseovarius sp. 217]
          Length = 262

 Score = 80.0 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 69/306 (22%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN++  +EG+                + +  +    DI+ LQE  S      
Sbjct: 2   PFTLATWNINSVRLREGL----------------VARLMQEEMPDILCLQECKSPVDKMP 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +          +   L            +  +A+  K       +    G   +   AG 
Sbjct: 46  L---------EAFAALGYRHVVARGQKGYNGVAILSKLPMAEVGAMDFAGLGHARHIAGQ 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                     NG  I     +       D  +   +            ++DW    +   
Sbjct: 97  --------LENGTVIH----NFYVPAGGDIPDRAVNDKFGQKLDYLTEMRDWFRDSRPEK 144

Query: 203 VPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRCNA 247
              ++ GD N          +    K +                       +        
Sbjct: 145 S--ILVGDLNIAPREDDVWNHKQLLKIVSHTPVEVEHLGDVMEAGGWQDVTRADIPEGQL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                         + SDH P
Sbjct: 203 YSWWSYRASDWDAANKGRRLDHVWASGDIRAAAHSS-------RILRGARGWDQPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|237797954|ref|ZP_04586415.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020805|gb|EGI00862.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 291

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 82/292 (28%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      +    +     +          +   + +     D D+V L
Sbjct: 30  PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGELIN--DFDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPAKIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271


>gi|283798597|ref|ZP_06347750.1| exodeoxyribonuclease III [Clostridium sp. M62/1]
 gi|291073681|gb|EFE11045.1| exodeoxyribonuclease III [Clostridium sp. M62/1]
          Length = 324

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 77/318 (24%), Gaps = 61/318 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L++ N ++L E++                 +  +       D++ LQE+       + 
Sbjct: 1   MKLLTLNTHSLEERD-----------YEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEA 49

Query: 84  FPKNTWCIFYSTER-------------------------------LINHSKRDSNNDIHT 112
             +      +                                       S +        
Sbjct: 50  DGEVLKKSGFIPCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFPVFWTWTSAKVGYGKYDE 109

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +A+  +          L   +D  +    R+A+ + + I   +  V  +      + D 
Sbjct: 110 GMALMSRRPIAEVSQLFLTDGRDYNNWK-TRKALAITLNIGKGEEPVSFVTAHMGWWKDE 168

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            E            Q + L  +            + GDFN + +  G   D        D
Sbjct: 169 EEPFSR--------QWERLDAF-ASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWTD 219

Query: 233 SLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMD--QNAYKFLIQESFSEILYNED 283
           +     K              +         IDY       ++     +           
Sbjct: 220 AYRAAGKRDGGITVPGAIDGWREDGEVPGMRIDYIWYGRKHDSGDRKSRGDVLIEEVRTV 279

Query: 284 DIKSRGKRLSDHCPISID 301
              S    +SDH  +  +
Sbjct: 280 FNGSDCPVVSDHFGVLAE 297


>gi|116619520|ref|YP_821676.1| endonuclease/exonuclease/phosphatase [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222682|gb|ABJ81391.1| Endonuclease/exonuclease/phosphatase [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 234

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 76/282 (26%), Gaps = 63/282 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N++     +G                 + +    L AD++ LQE+  ++A    
Sbjct: 11  LRVATYNVHKCRGMDGRVSP-----------HRIGRVLNELKADVIGLQEVLGHHAEIIA 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R    +             V  +      ++Y L            R
Sbjct: 60  AEMKMGFALGENRRHQGAA---------YGNVVLSRFPIRSTRNYDLTVEG-----REQR 105

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +   ++++G   + + ++HL +       +     +  LL   A              
Sbjct: 106 GCLRADIDVHGSGVLHIFNVHLGTAWPERRHQGRRLVAAELLGDIAL------------D 153

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYF 260
            P V+ GDFN                    + +     K +             + +D+ 
Sbjct: 154 SPRVLIGDFNEWT-------------RGLATKLLRSHMKTANFRWRSYPGLLPVLHLDHI 200

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             D       +Q                    SDH P+  D+
Sbjct: 201 YYDPALSLHRVQV----------HRSPLSLLASDHLPLFADF 232


>gi|330720429|gb|EGG98744.1| Endonuclease/exonuclease/phosphatase family protein [gamma
           proteobacterium IMCC2047]
          Length = 242

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/252 (11%), Positives = 67/252 (26%), Gaps = 47/252 (18%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            +   +         D+V LQE    +       +  +    S              + +
Sbjct: 29  ENLDSIANMLAGF--DVVALQEADGGSIRTGHLNQVKYLAEMSGFP-----YWYQQLNRN 81

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
                +  N  + +    L+       R   R A+ +      + +  + +HL       
Sbjct: 82  LGRFAQHSNGLLSRVKPELIADHKLPGRLPGRGAIFMRYGKEDESLVFVVLHLSLG---- 137

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                          Q   L  ++ +        VI GD N             K +  +
Sbjct: 138 ------------RRAQLDQLA-YVKELIADHKHVVIMGDLNTCAE---------KILHLS 175

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                  +  +   N   + R    +D+ ++  +            + Y           
Sbjct: 176 PLRDAKFQSPEGAGNTYPSWRPVSNLDHILVSPDLRVK----WAEVVPY----------A 221

Query: 292 LSDHCPISIDYD 303
           LSDH P++++ +
Sbjct: 222 LSDHLPLAVEIE 233


>gi|225620509|ref|YP_002721766.1| exodeoxyribonuclease [Brachyspira hyodysenteriae WA1]
 gi|225215328|gb|ACN84062.1| exodeoxyribonuclease [Brachyspira hyodysenteriae WA1]
          Length = 261

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 76/301 (25%), Gaps = 70/301 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N +                      L  + K  + DI+ LQE     A  + 
Sbjct: 4   LKIISWNVNGIRAAYKKG---------------LVDFIKKENPDIICLQE---TKAFEEQ 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P++   I      +            ++ +A+  K     +    L      FS    R
Sbjct: 46  LPEDLRNIEGYELFINPADPEV--KKGYSGVAIYTKLKPNKEIKNKLGS---KFSDREGR 100

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +      + +++  +    +            +++    L        +   
Sbjct: 101 I-----LSLEFDDFTIFNVYFPNGGKSEEHFQYKLSFYDEITKHLSKL--------KKNT 147

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANK 249
             ++ GD N     +                          N       +          
Sbjct: 148 NVILCGDMNIAHEAIDLARPKENEKSIGFLPEEREKITEFLNKGFTDTFRMFVKEGGHYS 207

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               K           IDYF ++      + +                    SDHCPI I
Sbjct: 208 WWDMKTRSREKNVGWRIDYFFVNNEMAPNIKRADILT-----------DVMGSDHCPILI 256

Query: 301 D 301
           +
Sbjct: 257 E 257


>gi|224282700|ref|ZP_03646022.1| exodeoxyribonuclease [Bifidobacterium bifidum NCIMB 41171]
 gi|313139858|ref|ZP_07802051.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313132368|gb|EFR49985.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 285

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 71/282 (25%), Gaps = 42/282 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIF----YSTERLINHSKRDS 106
           +    +  +A     DI  +QE+ +    +  +F +  +        + +  +       
Sbjct: 15  AKRKGIETWAGEHAPDIWCMQEVRAPQDELDPIFGEFGFEYATAGKIADQSELTAMNEVC 74

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  + +        ++       +D  S    R     +    G  I V  +++ +
Sbjct: 75  RVKGRAGVGLLTDLPVTARRYGLPGLDEDVDS---GRWIEADVTTPQGYGITVACVYVHA 131

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216
               D ++         L      + +   +        V+ GDFN              
Sbjct: 132 GNSDDPVKMAQK--YRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHTPLDIKNAKAN 189

Query: 217 ------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFV 261
                          + +   + +                   +           IDY  
Sbjct: 190 IKHAGFLPAERAYVDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDNNVGWRIDYQF 249

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +       +   +  D   S   R SDH P++I YD
Sbjct: 250 ATPELAE-------TARGFVIDKAPSYDARWSDHAPLTITYD 284


>gi|217034282|ref|ZP_03439699.1| hypothetical protein HP9810_885g13 [Helicobacter pylori 98-10]
 gi|216943254|gb|EEC22719.1| hypothetical protein HP9810_885g13 [Helicobacter pylori 98-10]
          Length = 250

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                     + +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|146286032|sp|A1YES6|APEX1_GORGO RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|120974134|gb|ABM46644.1| APEX1 [Gorilla gorilla]
          Length = 318

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 76/315 (24%), Gaps = 82/315 (26%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYN----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                   A  +  P  ++  + +      +S           +  R+  ++V       
Sbjct: 98  KCSENKLPAELQELPGLSYQYWSAPXXKEGYSG--------VGLLSRQCPLKVS------ 143

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G  +       R  V            ++  ++ +                   +  + 
Sbjct: 144 YGIGEEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRRFLKG 198

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSL 234
           L         S  P V+ GD N     +   +                 F + +      
Sbjct: 199 LA--------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLA 250

Query: 235 IRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             F     +   A                  +DYF++  +    L               
Sbjct: 251 DSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL----- 305

Query: 286 KSRGKRLSDHCPISI 300
                  SDHCPI++
Sbjct: 306 ------GSDHCPITL 314


>gi|255325901|ref|ZP_05366993.1| endonuclease/exonuclease/phosphatase [Corynebacterium
           tuberculostearicum SK141]
 gi|255297113|gb|EET76438.1| endonuclease/exonuclease/phosphatase [Corynebacterium
           tuberculostearicum SK141]
          Length = 913

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 91/340 (26%), Gaps = 68/340 (20%)

Query: 22  QKVRLVSWNINTLSE---------------------QEGVSLWKNSVKRTTSDYTLLRQY 60
            +  + ++N+                            G +    +          +   
Sbjct: 489 GEYTIGAFNVLNYFTSLGEEFGGSAYTDREGNKVTVNRGKTRGAYTQSALEDQERKIVAA 548

Query: 61  AKNLDADIVFLQEMGS------------------YNAVAKVFPKNTWCIFYSTERLINHS 102
              LDAD++ L E+                       + +      W    S        
Sbjct: 549 INGLDADVIGLSEIEDGYAVTGDFAQRDKALKHLTEKLNEAAGSEKWAFVPSPSEDAVPD 608

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
              S + I TA    K  V+ + +S      + + +           ++   +    +  
Sbjct: 609 ---SPDVIRTAFIYHKDVVKPVGESRIFQDDRFTGTAREPLAQEFQPLKEGEESFVAVAN 665

Query: 163 HLKSFC----FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINY 217
           H KS            +    + ++ + QAQ + D + ++++    P    GDFN   + 
Sbjct: 666 HFKSKGSVAKGDADSGDGQGNNPNVRNAQAQAVLDALHKQEDWKDKPLFALGDFNTYTHE 725

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                        +   +   K +     + +       +D+ + ++ A   L       
Sbjct: 726 T-----ALDVFRNDGFTVPAEKYEADP--SYQFSGLLGTLDHVLANKVATGTLDDAQVWN 778

Query: 278 ILYNEDDIKSRGKR--------------LSDHCPISIDYD 303
           I  +E       +R               SDH P+ + + 
Sbjct: 779 INADEPVAFEYSRRNYNIVDFYDDSPFRASDHDPVKVGFT 818


>gi|319427362|gb|ADV55436.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens 200]
          Length = 396

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/371 (12%), Positives = 92/371 (24%), Gaps = 93/371 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +++ S N+    E            S  +       L ++  +   DIV  QE+ S   +
Sbjct: 23  IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFIAHRQPDIVGFQEVFSPEPL 82

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
            ++  +     +++                  A+A R   V +         +     S 
Sbjct: 83  KRIAREQG-LGYFAVVDEPTLISDYIYRSPVVALASRYPIVEISSVEPDTRLVAAMGLSS 141

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176
             A +R+ +   VE+    K     +H KS     +LE                      
Sbjct: 142 EFAFSRKVLRATVEVPHIGKCDYYVVHFKSKRAGLALEPKLFEHQPLGHQPLSLDNLAPA 201

Query: 177 ------------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRKI-- 215
                                S      +A  L    + +++ES  P ++ GDFN  +  
Sbjct: 202 VSMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQESKHPVIVMGDFNDSLTM 261

Query: 216 -------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------------- 246
                        +           +        F + +                     
Sbjct: 262 GALDALTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDSLTGNT 321

Query: 247 ---------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKR 291
                     +        +DY ++         +     + Y   D         R   
Sbjct: 322 AYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAY 381

Query: 292 LSDHCPISIDY 302
            +DH P+ ++ 
Sbjct: 382 STDHAPVIVEL 392


>gi|30585287|gb|AAP36916.1| Homo sapiens APEX nuclease (multifunctional DNA repair enzyme) 1
           [synthetic construct]
 gi|60653967|gb|AAX29676.1| APEX nuclease 1 [synthetic construct]
          Length = 319

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|125490347|ref|NP_001074954.1| DNA-(apurinic or apyrimidinic site) lyase [Pan troglodytes]
 gi|146286033|sp|A1YFZ3|APEX1_PANPA RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|146286034|sp|A2T6Y4|APEX1_PANTR RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|219474|dbj|BAA02633.1| APEX nuclease [Homo sapiens]
 gi|1710232|gb|AAB50212.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
 gi|12803075|gb|AAH02338.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|14198174|gb|AAH08145.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|17939646|gb|AAH19291.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|30583311|gb|AAP35900.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|61358640|gb|AAX41599.1| APEX nuclease 1 [synthetic construct]
 gi|61362429|gb|AAX42220.1| APEX nuclease 1 [synthetic construct]
 gi|61362434|gb|AAX42221.1| APEX nuclease 1 [synthetic construct]
 gi|121483845|gb|ABM54218.1| APEX1 [Pan paniscus]
 gi|123981822|gb|ABM82740.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic
           construct]
 gi|123996645|gb|ABM85924.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic
           construct]
 gi|124111123|gb|ABM91939.1| APEX1 [Pan troglodytes]
 gi|208965824|dbj|BAG72926.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic
           construct]
 gi|1090503|prf||2019234A APEX nuclease
          Length = 318

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|332882499|ref|ZP_08450117.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332679559|gb|EGJ52538.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 255

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 85/303 (28%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                        ++ K+ + D++ LQE+       K 
Sbjct: 1   MKIISYNVNGIRAALTKGF---------------TEWLKSANPDVLCLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++           +    ++ +A+  K        +  +G    +     R
Sbjct: 39  LEAQIPTEVFTELGYTYQYYHSAEKKGYSGVAILSKIKP----KHVEVGTGIDYMDKEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++  +   + V+ ++L S    D                    + +I + K+++ 
Sbjct: 95  -----VLRADFDTLSVMSLYLPSGTNPD--------RLDFKLTFMADFQKYIDKLKQTIP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
             VI GD+N     +  +D                          I   +      +   
Sbjct: 142 NLVICGDYNICHEAIDIHDPVRNATVSGFLPIEREWLDKFMKSGFIDSFRYFHKEPHQYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++       + +                  + SDHCPI +
Sbjct: 202 WWSYRANARNNNKGWRIDYHLVSAPLENRMERALIL-----------PEAKHSDHCPIVL 250

Query: 301 DYD 303
           +  
Sbjct: 251 EVS 253


>gi|331702430|ref|YP_004399389.1| exodeoxyribonuclease III Xth [Lactobacillus buchneri NRRL B-30929]
 gi|329129773|gb|AEB74326.1| exodeoxyribonuclease III Xth [Lactobacillus buchneri NRRL B-30929]
          Length = 256

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 72/302 (23%), Gaps = 78/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                        +  + LDAD   +QE          
Sbjct: 1   MKFISWNVNGLRAAVKHDF---------------AETFQQLDADFFCIQETKMQEG-QLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                       +  P+       S   + 
Sbjct: 45  LDLPGYQQYFNYAERKGYSGTAIFT-----------------KHAPMHVTYGINSDEFDH 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +++  ++ +        +          Q    L        ++  
Sbjct: 88  EGRAITLEYPD--FYLVTSYVPNSGAGLKRLDFRMGWNKAFYQYLTEL--------DAKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           +  +     +  F      + +  
Sbjct: 138 PVILCGDLNVAHKEIELKNPQSNHHNAGFTDEERQDFTKLLKAGFMDTFRHFYPDQTDIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV        +        ++            SDHCP+ 
Sbjct: 198 SWWSYRFHSRDRNAGWRIDYFVASNRLADQIEDSKILTDVF-----------GSDHCPVE 246

Query: 300 ID 301
           +D
Sbjct: 247 LD 248


>gi|328870805|gb|EGG19178.1| transcription factor IIIC-gamma subunit [Dictyostelium
           fasciculatum]
          Length = 1238

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 77/315 (24%), Gaps = 71/315 (22%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               A  + ++++VSWN+                            Y      DIV LQE
Sbjct: 105 FTTPAVSSNQIKIVSWNVAGFGACTKKGFK---------------DYLIKEQPDIVCLQE 149

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             +  AVAKV        +        H         H   A+  K   +   S   +  
Sbjct: 150 --TKIAVAKVPKSEIPEGYTY------HFNPCIEKTGHHGTALLTKIKPISITSGIGISK 201

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            D   R         +V    +  +V++ ++ +                  +++      
Sbjct: 202 HDQEGR---------VVTAEFEDFYVVNAYVPNSGVDRKEPLKRLG---YRTKEWDVDFF 249

Query: 194 WITQKKESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFP 238
                  +  P V  GD N     +                     +     +  +    
Sbjct: 250 KYMSDLNTKKPVVWCGDLNVAHTEIDLANPKSNSRTAGFTIEERTSFSGHLNSGFIDTHR 309

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                +                     +DYF++       +        +          
Sbjct: 310 HFNPGKTGTYTFWSYMGGARAKNAGWRLDYFIVPATFIGSIAASFIRSKV---------- 359

Query: 290 KRLSDHCPI-SIDYD 303
            + SDHCPI  ID +
Sbjct: 360 -QGSDHCPIGIIDLE 373


>gi|297171763|gb|ADI22754.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0500_29J11]
          Length = 248

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 78/280 (27%), Gaps = 52/280 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ S+NI            K+           +      LDADIV LQE+       ++
Sbjct: 2   FRVASYNIR-----------KSVGTDWRRRPKQILDVLTELDADIVALQEV-DRRLGDRL 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +   I   T            +       +  +    L +   L+           R
Sbjct: 50  SSLSPGLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLV-----LPALEPR 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    ++I   KI V+ +HL                     +QA+ + D +    E  +
Sbjct: 105 GAALADLQIGDLKIRVVGMHLGLVGLW-------------RKRQARAVLDQLAS-LEEPL 150

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+ GD N+           W T     +         +   +  +    +  D  +  
Sbjct: 151 PTVMMGDLNQ-----------WNTEGGCLAHFAEDHHVIAPGLSFHSQMPFVSFDRIITS 199

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + +                    R +  SDH P+  D  
Sbjct: 200 LDIHVDAAAV----------HSSERARLASDHLPVWADLS 229


>gi|312885260|ref|ZP_07744937.1| hypothetical protein VIBC2010_03195 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367067|gb|EFP94642.1| hypothetical protein VIBC2010_03195 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 452

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 81/289 (28%), Gaps = 34/289 (11%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    +R+ ++N+  +         + S+   +               D++  QE  S  
Sbjct: 181 TRDNTLRVATYNLWMIPAVSSDISARTSLMDHSL-----------SGYDVLAFQEAFSNR 229

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++F   +    Y T+ L      DS       +    +   +    Y +     S  
Sbjct: 230 -RNRLFDDLSEEYPYQTQVLGG----DSGALYDGGVVTLSRYPILEA-DYLVFDHCSSTD 283

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              ++  V   +E NG+   V + HL SF    +          L +         +T+ 
Sbjct: 284 CHADKGIVYTKIEKNGQIYHVFNTHLASFGTRKAKRLRRLQLGLLRTF-------MLTKN 336

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA---------NK 249
                  + AGDFN   N   +      +I   +             +            
Sbjct: 337 IPEDEAVIYAGDFNVDKNNHFSEYQLMLSILEVEPPTFA-GYTQGTFDPSINKYAAAKYS 395

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              N   +DY    +       + +   +     D       LSDH  +
Sbjct: 396 GGTNTSYLDYVFTSKRHRPATQKLNTVRLKQRVSDSTWGEWHLSDHFSV 444


>gi|260578815|ref|ZP_05846722.1| 5'-nucleotidase family protein [Corynebacterium jeikeium ATCC
           43734]
 gi|258603113|gb|EEW16383.1| 5'-nucleotidase family protein [Corynebacterium jeikeium ATCC
           43734]
          Length = 928

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 92/332 (27%), Gaps = 63/332 (18%)

Query: 25  RLVSWNINTLSEQEGVSLWK----------------------NSVKRTTSDYTLLRQYAK 62
            + S+N+       G                            S +        + +   
Sbjct: 515 SIASFNVLNYFTDLGQDQGNCGSYKDREGNPVTADKCDVRGAYSEQAFKDQQAKIVKAIN 574

Query: 63  NLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            LD  ++ L+E+ +          A+  +  +               +   + + I TA 
Sbjct: 575 TLDVSVLGLEEIQNSAKFGKDRDAALKHLVDELNAAGGKWEYVKSPATVAKNEDVIRTAF 634

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING----KKIWVLDIHLKSFC-- 168
             +   V  + +S  L            R+ +    +  G    +    +  H KS    
Sbjct: 635 IYQPDKVEPVGESKILDVEAFDQIA---RQPLAQQFKNKGAKDEQAFVAVVNHYKSKGSV 691

Query: 169 -FLDSLENTYSPSCSLLSQQAQ-WLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFW 225
              D+       + + L  +    L  W+++  +    P  I GDFN             
Sbjct: 692 ARGDADTGDGQGNNAKLRAEMSSQLVKWLSEDADFKDKPQFILGDFNAYAKEDAI----- 746

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           + I+         K      ++ +       +D+ + ++ A +        +I  +E   
Sbjct: 747 RIIEEAGYTNLETKFDAG--HSYQFGGRVGSLDHVLANEKATEMATGADVWDINADESVA 804

Query: 286 KSRGK--------------RLSDHCPISIDYD 303
               +              R SDH PI + ++
Sbjct: 805 FEYSRRNYNVVDFYEPNVFRASDHDPIKVGFN 836


>gi|332304993|ref|YP_004432844.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172322|gb|AEE21576.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 391

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/388 (11%), Positives = 97/388 (25%), Gaps = 86/388 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNI-----NTLS---EQEGVSLWKNSVKRTTSD 53
           + K V  L+        + A+ VR+ ++N+     N L       G  L++N        
Sbjct: 1   MYKVVGLLILLAGGSLVAQAKTVRIATYNVSMEASNYLPRGVSPVGNELFENLRHGDNQQ 60

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN---------------TWCIFYSTE-- 96
              + +  + +  DI+ L E    +   K                     +  FY+    
Sbjct: 61  IRNIAEIIQRVRPDIILLNEFDYTSDDDKGVKAFINNYLLVSQQGNKRIDYPYFYTAPVN 120

Query: 97  ----------------RLINHSKRDSNNDIHTAIAVRKKNVR------------------ 122
                                +           + +  +                     
Sbjct: 121 TGVASGVDLNHNGMSTDNGGDTFGFGLYPGQYGMLLLSRYPIQRDTIRTFQHFLWQDMPN 180

Query: 123 -------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
                      S        +  R  ++   ++ + ++ + + +L  H     F      
Sbjct: 181 GLLSSVKAEDGSDWYSPEAQAVFRLSSKSHWDVPITLHNQTVHILASHPTPPVFDGPENR 240

Query: 176 TYSPSCSLLSQQAQWL-----KDWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFW 225
               +   +     ++      D++   K      +   FVI GD N        N +  
Sbjct: 241 NGKRNHDEIRFWTDYISAGKVADYVYDDKGRKGGINSNQFVILGDLNASAKEGDGNKEGI 300

Query: 226 KTIDPNDSLIRFPKEKDSRC---------NANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
             +  N  +                      +     ++  DY +  +   +      F 
Sbjct: 301 GGLLNNAKVNNHSVPHSEGGALHSPNNELGPSHTAFWRMRADYVIPSKALGEVTDSGVFW 360

Query: 277 EILYNEDDIKSRGKRL-SDHCPISIDYD 303
               +      R ++  SDH  + +D D
Sbjct: 361 PTPQDPLHRLIRDRQASSDHRLVWVDVD 388


>gi|325105846|ref|YP_004275500.1| exodeoxyribonuclease III Xth [Pedobacter saltans DSM 12145]
 gi|324974694|gb|ADY53678.1| exodeoxyribonuclease III Xth [Pedobacter saltans DSM 12145]
          Length = 255

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 88/299 (29%), Gaps = 62/299 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                         + +  +AD+V LQE+       K 
Sbjct: 1   MKIISYNVNGIRAAINKGW---------------LDWLQATNADVVCLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P     I   +E   +H    +    ++  A+  K+  +  +    + A D   R    
Sbjct: 39  TPDQIQDIHKLSELGYHHFWYPAKKKGYSGTAILTKHEPLHVEYGCGIEAYDDEGR---- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++  + +K  V+  +  S    D  ++      +     A  L +          
Sbjct: 95  -----VIRADFEKFSVISAYFPSGSSGDERQHFKYQFLADFEIYAADLMNTYPNLLICGD 149

Query: 204 PFVIA---------GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             +            + N         +   + I+     I   +  +   +       +
Sbjct: 150 YNICHRAIDIHNPKSNANSSGFLPEEREWMERFINSG--FIDTFRHLNPDPHHYTWWSYR 207

Query: 255 ---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      IDY ++     + + + +                + SDHCPI ++  +
Sbjct: 208 AGARAKNLGWRIDYHLLSSTMVENIKRAAIL-----------PEAKHSDHCPILLELQW 255


>gi|298244699|ref|ZP_06968505.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM
           44963]
 gi|297552180|gb|EFH86045.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM
           44963]
          Length = 343

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 78/300 (26%), Gaps = 56/300 (18%)

Query: 5   YVLALVFFLVPCTASV-----AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
            + +L F     T S       + +  ++WN    + + G                 +RQ
Sbjct: 84  ILFSLCFSPRLGTGSAQSIEGGRTITAMTWNFLGDNTRGGY----------------VRQ 127

Query: 60  YAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                  D++ LQE      +    +  +  + ++ S E                   + 
Sbjct: 128 LINTHHPDLIALQEADWNGIDEAQDILRQYPYHLYGSGEAPPGE-------------VLL 174

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                +            S         +   +++  G+ + V++ H  S          
Sbjct: 175 STLPILDHGQVTAPDGSRSVWDIPR--ILWARLDLGHGQTLLVVNAHPISSINTVYGC-- 230

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                     Q + L  ++    +     ++ GD N         D      D +  + +
Sbjct: 231 -LFCPQRRDSQVKALHQFLQPFIQHGERLLMLGDMNTTDREPAYQDLSAGLQDTHLLVGK 289

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                      N+     + IDY  +               +  + D       R SDHC
Sbjct: 290 GSGHSWGIRGLNQYWAF-LRIDYMFVTPK---------VKPLNLDTDCTS----RGSDHC 335


>gi|294678851|ref|YP_003579466.1| exodeoxyribonuclease III [Rhodobacter capsulatus SB 1003]
 gi|294477671|gb|ADE87059.1| exodeoxyribonuclease III-2 [Rhodobacter capsulatus SB 1003]
          Length = 262

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/306 (9%), Positives = 67/306 (21%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       L+ +       D++ LQE  S      
Sbjct: 2   SFTLATWNIN----------------SVRLREALVCKLMTEEAPDVLCLQECKSPVDK-- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    F +   L            +  +A+  K   V   +        +      
Sbjct: 44  -------IPFAAFAELGYRYHVARGQKGYNGVAILSKLPMVEAGAGDYANLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +   +E     + + + ++ +    D  +   +            ++D      +  
Sbjct: 93  ---IAGRLENG---VTIHNFYVPAG--GDIPDRAENEKFGQKLDFLSHMRD--DFHAQRP 142

Query: 203 VPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRCNA 247
              ++ GD N          +    K +                   +   +        
Sbjct: 143 DRAILVGDLNIAPREDDVWNHKALLKIVSHTPIEVEHLAAAQDAGGWVDVTRADIPEGQL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                        ++ SDH P
Sbjct: 203 YSWWSYRSPDWDGADKGRRLDHIWATPDIAGAAHGS-------RILRAARGWEQPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|327490155|gb|EGF21943.1| exodeoxyribonuclease [Streptococcus sanguinis SK1058]
 gi|332367237|gb|EGJ44972.1| exodeoxyribonuclease [Streptococcus sanguinis SK1059]
          Length = 322

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 88/325 (27%), Gaps = 56/325 (17%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           K VL  V             ++L+SWNI++L+        +  +         + Q  + 
Sbjct: 28  KSVLNFVIINSVNFTRKGNFMKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQA 81

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            +ADI+ +QE                   +        S R+     +       K    
Sbjct: 82  ENADIIAIQETKLSATGPTKKHLEILTYLFPDYENTWRSSREPARKGYAGTMFLYKKELT 141

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              ++P +GA  +    G      + +E +G   +V  ++  +        N      + 
Sbjct: 142 PTVTFPEIGAPSTMDVEGR----IITLEFDG--FFVTQVYTPNAGDGLKRLNERQVWDAK 195

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTI 228
            ++    L        +   P +  GD+N               R   +       +  +
Sbjct: 196 YAEYLASL--------DEQKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNL 247

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEI 278
                   F        N       +            IDY++        + +    + 
Sbjct: 248 LAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDS 307

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
              +           DH PI ++ +
Sbjct: 308 GARQ-----------DHTPIVMEIE 321


>gi|281491447|ref|YP_003353427.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375165|gb|ADA64678.1| Endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. lactis KF147]
          Length = 352

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 84/316 (26%), Gaps = 55/316 (17%)

Query: 21  AQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            Q  +++++NI               GV +   S     S      +       D   +Q
Sbjct: 56  GQTYKMMTFNIGYGSYPPSFNFFMDGGVDVRAYSKSAVKSAIQEDIRLINKEKPDFGNIQ 115

Query: 73  EMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRDSNNDI---HTAIAVRKKNV 121
           E+      ++   +          +    +      +        I    + I    K  
Sbjct: 116 EIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAYLFYPVTKPIGKAKSGIMTYSKYE 175

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 Y L    +        RA  + +   + + KK  + + HL +F           
Sbjct: 176 IESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDKKFVIFNTHLSAFITDQ------- 228

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPND 232
               +  QQ   L D + +        +   D+N  +    + +  W      + +    
Sbjct: 229 ---KIQKQQLLTLFDEMKKYVSKGDYVICGADYNHALAGKAHPELTWMKEFPTENLTKGM 285

Query: 233 SLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            ++        R       +         ID F++  N     IQ               
Sbjct: 286 RVVAPTNAPTVRSLDYAYDKKNPKNTFGIIDGFLVSNNIKDLKIQ------------TID 333

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+ +D+ 
Sbjct: 334 NQFKSSDHQPVVMDFS 349


>gi|284030755|ref|YP_003380686.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283810048|gb|ADB31887.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 242

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 76/285 (26%), Gaps = 51/285 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S    +R++S+N++                R   D   L +  +    D+  +QE  ++ 
Sbjct: 2   STGPSLRVLSYNVH----------------RWGDDREALARVVRACAPDVALIQEAPTWW 45

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              +           +       +            ++  +  R   +    L A     
Sbjct: 46  GTRRKRRAMAATFGMTYVAAAARNAILVAGSTEVVESLHWRVWRPFVRRRLRLIATQLPG 105

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                 AV   V + G  + ++  HL                          L+  +   
Sbjct: 106 -----GAVGGRVTLGGTDLALVVCHLGLHIRGRQH----------------ELEQVLRGC 144

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           +   +P+++ GD N +      +    + +      +              +   +  ID
Sbjct: 145 RSFNLPYLLVGDLNEEPGGPVWDRLAAEGLTDLGVDVGPT---------YHSDNPERRID 195

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +       +I      +       ++     SDH P+ I+  
Sbjct: 196 GAHLSPELSGRVIP-----LDTVAGVTRADLAAASDHLPLLIELT 235


>gi|47214833|emb|CAF95739.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 317

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 82/285 (28%), Gaps = 29/285 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80
            +++ S+NI    +                   +L +       DI+ + E+      +V
Sbjct: 4   TMKVASFNIQKFGKN---------KLSDPEVLNILVKIVCRY--DIILILEVVDVSGQSV 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              F             +   ++          + + + NV  L  SY            
Sbjct: 53  KLFFDALNKSSTKHHYSMKLSARLGRTRYKEQFLFLYRDNVVDLVGSYQFDDQVSEGGDV 112

Query: 141 GNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             R    L        +  ++ I + +       E        L   Q           K
Sbjct: 113 FARDPYILRFRCPTTVLKDLVMIPVHTKPEDSEKELDELHDVFLNVTQ-----------K 161

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                 +I GDFN    Y+ N D     I  + +      +      +NKN      I  
Sbjct: 162 WGTDNVMILGDFNADGAYVSNRDMKKIRIRSDKNFHWLIGDDVDTTASNKNSHTYDRI-- 219

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDY 302
            V   +  + ++  S     + ++   S  +  ++SDH P+ ++ 
Sbjct: 220 VVYGDDMLQAVVPNSAKTFNFQKEYRLSDEQALKISDHYPVEVEL 264


>gi|332263793|ref|XP_003280936.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Nomascus
           leucogenys]
 gi|332263795|ref|XP_003280937.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Nomascus
           leucogenys]
 gi|332263797|ref|XP_003280938.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Nomascus
           leucogenys]
 gi|332263799|ref|XP_003280939.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Nomascus
           leucogenys]
          Length = 318

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 76/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKTATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                 L +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEALRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|260428526|ref|ZP_05782505.1| extracellular nuclease [Citreicella sp. SE45]
 gi|260423018|gb|EEX16269.1| extracellular nuclease [Citreicella sp. SE45]
          Length = 1183

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/374 (11%), Positives = 89/374 (23%), Gaps = 95/374 (25%)

Query: 21   AQKVRLVSWNINTLSEQ-----------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
               +++ S+N+                 +      ++          L        A+++
Sbjct: 810  GGTLQVASYNVLNFFTTLDDGALTGPDGDLDPRGADTAAEFERQADKLVGGILGSGAEVL 869

Query: 70   FLQEMGSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
             LQE+ +         + +            +              + I T I      V
Sbjct: 870  ALQEIENNGSGEGSAIDTLTDRINAEDPGANFGYVDPTGSGGFIGTDAITTGIIYDAGAV 929

Query: 122  RVLQQSY-------------------PLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVL 160
             +L   +                     +G         NR +V    + N  G+   V+
Sbjct: 930  TLLYSDFIAYEESSAAVTNALATTIADAIGYDFEAYDQSNRPSVAATFQDNSSGETFTVV 989

Query: 161  DIHLKSFC-----------------FLDSLENTYSPSCSL----------------LSQQ 187
              H KS                      ++      +                    +  
Sbjct: 990  SSHFKSKGDSGLAALASAAEDHLAGGGTAITQADLDALYADANFDQGDGQGFWNGVRTDA 1049

Query: 188  AQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR- 244
            A  L +WI            V+ GD N             + +D +            + 
Sbjct: 1050 AVELAEWIGTGYNGGGVSNVVMLGDMNSYAEEDPV-----QYLDDDAGFTDLIDAYIGQE 1104

Query: 245  -CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290
               +      +  +D   +D     F+   +   I  +E D+ S  +             
Sbjct: 1105 EAYSYVFDGQQGTLDQGFVDDMLAGFVTGVTEWHINADEPDLLSYDESFVESAFYDAGVF 1164

Query: 291  RLSDHCPISIDYDF 304
              SDH P+ +  DF
Sbjct: 1165 GSSDHDPLIVGLDF 1178


>gi|254481760|ref|ZP_05095003.1| endonuclease/exonuclease/phosphatase family protein [marine gamma
           proteobacterium HTCC2148]
 gi|214037889|gb|EEB78553.1| endonuclease/exonuclease/phosphatase family protein [marine gamma
           proteobacterium HTCC2148]
          Length = 255

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 79/286 (27%), Gaps = 50/286 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---- 77
           +++ ++++NI+                        +R+      ADIVFLQE+       
Sbjct: 6   KEIHILTYNIH----------KGYCSGNRRFMLESMRERITETGADIVFLQEIHGTAIKS 55

Query: 78  NAVAKVFPKNTWCIFYS----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            A  + F       F            + +           A+   +  +  ++  +   
Sbjct: 56  EAKKRKFSYPDQPHFEYLADQAWPHFAYGQNAIYRKGDHGNAILSMHPFISWENIDVSIF 115

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             S     +R  +  ++E+  KK  +  + +                     +Q Q L +
Sbjct: 116 PRS-----SRSILHGVIELPHKKTRLHTLCVHLGLL-----------EQERREQLQTLTE 159

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            I Q      P +IAGDFN                D       F   +            
Sbjct: 160 RIDQHVPRDEPMIIAGDFND-----WRRRAENHLHDDLGLAELFVSLEGRHARTFPVWAP 214

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            +P+D           L   S   +           + LSDH  + 
Sbjct: 215 LLPVDRVYFRG-----LKPISCRRL------ANGHWRDLSDHAALF 249


>gi|190574562|ref|YP_001972407.1| putative exodeoxyribonuclease III protein [Stenotrophomonas
           maltophilia K279a]
 gi|190012484|emb|CAQ46112.1| putative EXODEOXYRIBONUCLEASE III PROTEIN [Stenotrophomonas
           maltophilia K279a]
          Length = 263

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 73/303 (24%), Gaps = 70/303 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R+ ++N+N +                      L  +      D+V LQE        
Sbjct: 5   KTLRIATFNVNGIGT----------------RLPQLLDWLHRESPDVVALQE-------- 40

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +            +A+  +    ++    L G         
Sbjct: 41  --LKATDAAFPAAALEQAGYGALWQGEARWNGVALLARGTMPVESRRRLPGEPKDTQSRY 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV  ++        V  ++L +       +  Y        +  + L        E 
Sbjct: 99  LEAAVHGVI--------VGALYLPNGNPQPGPKFDYK------LRWMERLIRHARSLVEL 144

Query: 202 LVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++ GDFN         D               D ++ +          K       
Sbjct: 145 PHPALLLGDFNVIPTDADVYDPKAWRRDALFQPEVRDAFERLLAQGWTDALRKVHGDATI 204

Query: 247 ANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +          ID+ +++    + L            D      ++ SDH P 
Sbjct: 205 YTFWDYFRQHAERDRGLRIDHLLLNPVLAERLKDAGV-------DRWVRLQEKASDHAPA 257

Query: 299 SID 301
            + 
Sbjct: 258 WVT 260


>gi|94987281|ref|YP_595214.1| exonuclease III [Lawsonia intracellularis PHE/MN1-00]
 gi|94731530|emb|CAJ54893.1| Exonuclease III [Lawsonia intracellularis PHE/MN1-00]
          Length = 259

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 75/304 (24%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL SWNIN          W                +     +DI+ LQE        KV
Sbjct: 5   LRLTSWNINGFRAIIKKPHW---------------NWFHENQSDIIALQE-------TKV 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P          E  +++         ++ +AV  K   +   +       +   +   R
Sbjct: 43  DPSQLQDNLQKPEGWLSYWSASIKKKGYSGVAVFSKPKPLAVTA----ELPNPTFQGEGR 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +       ++I+  +    D   +            A+              
Sbjct: 99  L-----LHLEYPSFHFMNIYFPNGTQGDHRLSYKLGYYDSFLNYAEE--------ARKTK 145

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GDFN                   +L     +         +  F        N  
Sbjct: 146 PIVVCGDFNTAHRPIDLARPKANEETSGFLPIERTWMDRFIAAGYIDTFRYVHGDIPNNY 205

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF +               +    D       + SDHCP+ 
Sbjct: 206 SWWSYQQRARERNVGWRIDYFFVS-----------IELMPTIRDAWIEMDIQGSDHCPVG 254

Query: 300 IDYD 303
           +  +
Sbjct: 255 LTLE 258


>gi|270295351|ref|ZP_06201552.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274598|gb|EFA20459.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 366

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 64/301 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++L+S+NI                         +  Y K   ADI+ LQE  +  +   
Sbjct: 101 SIKLLSYNIMGFDGAAKQDGKNP-----------ILTYLKESGADILCLQEYSTVQSSKH 149

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  K+      +      ++   S       IA   K   +  +                
Sbjct: 150 LSQKDVERELKAYPYHRINT-VGSGKGHTNKIACYSKFPILSSRILDYPS--------EY 200

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYSP 179
             +V   ++I    + +++ HL+S     +                            + 
Sbjct: 201 NGSVLYEIKIGEDTVTLINNHLESNKLTKADKVVYEDMLKSPEKEKVKSGARLLIRKLAE 260

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           + ++ + QA  +   I          ++ GDFN        +    + +D       F +
Sbjct: 261 ASAIRAPQADTIAHEIA--ASPHPYIIVCGDFNDTPISYT-HRTIAQDLDD-----AFTQ 312

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  +    R    ID  +  +N   +             +    R  + SDH PI 
Sbjct: 313 SGRGLGISYNQNRFYFRIDNILTSKNLRAY-------------NCTVDRSIKESDHYPIW 359

Query: 300 I 300
            
Sbjct: 360 C 360


>gi|261838799|gb|ACX98565.1| exodeoxyribonuclease [Helicobacter pylori 51]
          Length = 250

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIDEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|149203971|ref|ZP_01880939.1| exodeoxyribonuclease III [Roseovarius sp. TM1035]
 gi|149142413|gb|EDM30458.1| exodeoxyribonuclease III [Roseovarius sp. TM1035]
          Length = 262

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/306 (9%), Positives = 68/306 (22%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN++  +EG+                + +  +    DI+ LQE  S      
Sbjct: 2   SFTLATWNINSVRLREGL----------------VARLMQEEGPDILCLQECKSPVDKMP 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +         +                 +  +A+  K       +        +      
Sbjct: 46  LEGFAALGYAHV---------VARGQKGYNGVAILSKLPIEEVGAMDFADLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +   +E       V+  +       D  +   +            ++DW    +   
Sbjct: 93  ---IAGRLENG-----VVIHNFYVPAGGDVPDRAVNDKFGQKLDYLTGMRDWFHDSRPEK 144

Query: 203 VPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRCNA 247
              ++ GD N          +    K +                       +        
Sbjct: 145 A--ILVGDLNIAPREDDVWNHKQLLKIVSHTPVEVDHLSAVMAAGGWQDVTRADIPEGQL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                        ++ SDH P
Sbjct: 203 YSWWSYRAADWDAADKGRRLDHVWATGDIATSAHSS-------RILRGARGWEQPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|119962536|ref|YP_947021.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1]
 gi|119949395|gb|ABM08306.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1]
          Length = 277

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 75/305 (24%), Gaps = 65/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S N+N L                      + ++ +  + DI+ LQE+ + + + + 
Sbjct: 10  LRIASVNVNGLRAAYKNG---------------MAEWLEPREVDILCLQEVRAPDDIVRK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W I ++                   +A+  +      +        D+  R    
Sbjct: 55  LIGEGWHILHTEAEAKG----------RAGVAIASREEPTATRVGIGDDYFDTSGRWVEA 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                        + V+  ++ S       +           +    +   + +  +   
Sbjct: 105 DYTVQNAAGEFTTLSVVSAYVHSGEVGTPKQEDK-------FRFLDAMTVRLPELAKHSD 157

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR-CN 246
             ++ GD N     L   +                 F + +          +        
Sbjct: 158 HALVVGDLNVGHTELDIKNWKGNVKRAGFLPEERAYFDRFLGEEIGWRDVHRGLAGNVAG 217

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY +                     D   S   R SDH P
Sbjct: 218 PYTWWSQRGKAFDTDTGWRIDYHLATPGLAAAA-------FSAVVDRAPSWDTRFSDHAP 270

Query: 298 ISIDY 302
           + +DY
Sbjct: 271 LVVDY 275


>gi|118472074|ref|YP_885233.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155]
 gi|118173361|gb|ABK74257.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155]
          Length = 260

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 75/306 (24%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    +  +    D D++ +QE    +     
Sbjct: 1   MRVATWNVN----------------SIRARVDRVTDWLARADVDVLAMQETKCSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +       +    +A+  +      Q    LG  +  +     
Sbjct: 41  ------KFPAMPFVELGYEVAYHGLNQWNGVAIASRVGLENVQ----LGFDNQPAWEAAA 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
            A  L     G  + V  +++ +   +DS    Y        +    L+D   +      
Sbjct: 91  EARALAATCGG--VRVWSLYVPNGRTVDSPHYAYK------LEWLAALRDNAQKWLADDP 142

Query: 203 -VPFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCN 246
                + GD+N                           ++ I                  
Sbjct: 143 QAQIALTGDWNIAPTDEDVWDIDFFAGSTHVTEKERAAFQAIVDAQFADVVRPFAPGP-G 201

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              ID+ +      + +               + +GK  SDH P
Sbjct: 202 VYTYWDYTQLRFPKRQGMRIDFILGSPAFAQRVGHAEIV-------REERKGKSPSDHAP 254

Query: 298 ISIDYD 303
           + ++ +
Sbjct: 255 VLVELN 260


>gi|157804057|ref|YP_001492606.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str.
           McKiel]
 gi|157785320|gb|ABV73821.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str.
           McKiel]
          Length = 260

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 89/305 (29%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +++ +WNIN                   +   LLR +    + DI+ LQE+   +   + 
Sbjct: 1   MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETEKFLF 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + ++                  +  +A+  K          +    +++    
Sbjct: 45  DELSDLPYNLYVH------------GQKTYNGVAIISKFPANE----IIKDFPNNYCSDQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +E+ + +      ++ ++     F+ S +     +        + L ++++ KK  
Sbjct: 89  ARF-LEIKLSLPIGLCNIISLYAPHGSFVGSDKFVTKLAF------YESLINYLSTKKSF 141

Query: 202 LVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCN 246
               +I GDFN     +                      +TI  +     + +       
Sbjct: 142 DEKTIIGGDFNIAPFDIDVYSPKALAETTCFTKVEQKKLRTILNSRFEDLY-RLMYPNKQ 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +         + ID  +   N   +L            D      ++ SDH P
Sbjct: 201 EFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIP 253

Query: 298 ISIDY 302
           +  ++
Sbjct: 254 VIANF 258


>gi|295094002|emb|CBK83093.1| Metal-dependent hydrolase [Coprococcus sp. ART55/1]
          Length = 367

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 99/324 (30%), Gaps = 60/324 (18%)

Query: 17  TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           + SV   + +V+WN+               G S++ ++ K+   +   +     +L ADI
Sbjct: 61  SPSVGDSISIVTWNLGYGSLGANADFFMDGGDSVYTSTAKQVNDNMEAITSELNSLAADI 120

Query: 69  VFLQEMGSY----------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
             LQE+             + + +  P  T    Y+ + L+          + + I    
Sbjct: 121 FLLQEVDERSSRSHKINEADILREKLPSYTSSYAYNYKTLMVPYPLPPIGRVTSGIMTLC 180

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                  +   L        R  N  R  +   + I G +  ++ ++L    +       
Sbjct: 181 SFEVSDAERIQLPCPFSYPIRLCNLKRCLIVSRIPIAGSEHELVIVNLHLEAYD------ 234

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--- 233
              S    + Q + L D +  +  +    +  GDFN+  + +  +    ++ D       
Sbjct: 235 ---SGEGKAAQTRMLADILQNEAAAGNYVIAGGDFNQTFSNVDLSAYPQQSADLWAPGSI 291

Query: 234 --------LIRFPKEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSE 277
                    I         C +                 ID F++  N            
Sbjct: 292 DVSEFGDSFICSTDSSAPTCRSLDKPYEGSDHESFQYYVIDGFIVSSNLQ---------- 341

Query: 278 ILYNEDDIKSRGKRLSDHCPISID 301
              N  +  +   + SDH PI +D
Sbjct: 342 --INSTETINLDFKNSDHNPIRLD 363


>gi|119775274|ref|YP_928014.1| exodeoxyribonuclease III [Shewanella amazonensis SB2B]
 gi|119767774|gb|ABM00345.1| Exodeoxyribonuclease III [Shewanella amazonensis SB2B]
          Length = 268

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 82/310 (26%), Gaps = 72/310 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+NIN L                 S    L+        DI+ LQE        + 
Sbjct: 1   MKVVSFNINGL----------------RSRLHQLQALIDTQAPDIIGLQE---TKVHDEA 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP        +    + +         H  +A+  K      +      A+D+      R
Sbjct: 42  FP-------LADVEAMGYKVYFHGGKAHYGVALLSKVEPESVEKGYPWDAEDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +         ++    + + +  F       +        +    L+  +T+      
Sbjct: 90  RMIIGKFRQPNGRL----LTVMNGYFPQGESRDHEIKFPAKRKFYADLQRLLTESYSCDD 145

Query: 204 PFVIAG---------DFNRKINYL------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             +I G         D     +                  ++ +T+        F     
Sbjct: 146 DIIIMGDINISPLDLDIGIGPDNAKRWLRTGKCSFLPEEREWLQTLKDWGFDDSFRVLHP 205

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            +         +           ID  +  ++    L+           D      ++ S
Sbjct: 206 EKDATYSWFDYRSKGFDDNRGLRIDVIMTTRSLTGRLVASGV-------DYNIRAMEKPS 258

Query: 294 DHCPISIDYD 303
           DH P+  +++
Sbjct: 259 DHAPVWSEFE 268


>gi|261205712|ref|XP_002627593.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Ajellomyces dermatitidis SLH14081]
 gi|239592652|gb|EEQ75233.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Ajellomyces dermatitidis SLH14081]
 gi|239611196|gb|EEQ88183.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Ajellomyces dermatitidis ER-3]
          Length = 773

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/358 (11%), Positives = 88/358 (24%), Gaps = 75/358 (20%)

Query: 22  QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K   +S+N      +  +      +          L+    K  +ADIV LQE+   + 
Sbjct: 378 DKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 437

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++     +              K + + +         
Sbjct: 438 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 497

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++      ++G+++ V+++HL        ++   +  
Sbjct: 498 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 557

Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207
                 Q       I    +                                    P +I
Sbjct: 558 LMEEVTQLAEKYSKIPACTDKTAFRFSEPENSADGDGTATPVEPAPSVEYSSGSQIPLII 617

Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247
            GDFN                  ++       +  +        F  +            
Sbjct: 618 CGDFNSYPGSAVYELMSRGHLIEDHPDLEKRLYGNLSRRGMSYPFNLKSAYGAIGELDFT 677

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304
           N        IDY     NA +        +  Y +           SDH  +  ++ F
Sbjct: 678 NYTPDFADVIDYIWYTSNALQVTGLLGAVDKSYLQRVPGFPNYHFPSDHLALMAEFSF 735


>gi|167648820|ref|YP_001686483.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
 gi|167351250|gb|ABZ73985.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
          Length = 358

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 84/312 (26%), Gaps = 35/312 (11%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   +   ++ ++++N+  L             +        LR+  K L+ D+V LQE 
Sbjct: 47  PIGPTRPVELSVMTYNVEGLPWPVRSGRGSKLKEIGRQ-LAGLRE--KGLEPDVVLLQEG 103

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSK--------------------RDSNNDIHTAI 114
                V  +   + +       R                                  + +
Sbjct: 104 F-RAEVDDLIELSGYPYVAKGPRKKQRDGSQLTKEDRPRYKRVKYRRKGEGWGKWGSSGL 162

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            V   +     +S+             N+  + + +++ G  + V            S  
Sbjct: 163 WVLSNHPIRWVKSHAYHYCA-GLDCLANKGVMLVSLDVPGLPVPVEIADTHLNSKGASGV 221

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                  +    QA+ L  ++   +    P ++ GDFN        +    +      S 
Sbjct: 222 PRNRNRIAH-HLQAEELGRFMGTDRTPGAPLIVGGDFNVMHAPDRFDYVMQRYPFEVVSQ 280

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL----YNEDDIKSRGK 290
           + F          + +      +D     Q+   F   +             D   + G 
Sbjct: 281 VCFQVPDSCDAKISADGDAPW-LD----TQDLIGFKQGDRVGIRPILVEARFDGSATGGP 335

Query: 291 RLSDHCPISIDY 302
            LSDH    + +
Sbjct: 336 VLSDHDAYEVTF 347


>gi|329847835|ref|ZP_08262863.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
 gi|328842898|gb|EGF92467.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
          Length = 258

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 76/302 (25%), Gaps = 70/302 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ ++N+N ++                    +L ++      D+V LQE           
Sbjct: 3   KIATFNVNGVNG----------------RLPVLLRWLAEARPDVVCLQE----------L 36

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                           +            +A+       ++    L G  D         
Sbjct: 37  KAPDEKFPVKALEAAGYGAIWHGQKSWNGVAILAHGAEPVETRRGLPGDPDDTHSRYIEA 96

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           AV  ++           ++L +       +  Y        +  + LK    +   +  P
Sbjct: 97  AVNGVLIGG--------LYLPNGNPWPGKKFEYK------LRWFERLKAHAAELLTTGAP 142

Query: 205 FVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            V+AGD+N     +                   + +  +          +          
Sbjct: 143 VVLAGDYNVMPTDIDVYAPDRWQDDALFRIEVREAYAALMAQGWTDALRELHPGEQIFTF 202

Query: 250 NLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +          ID+ ++  +    L Q          D      ++ SDH P+ I 
Sbjct: 203 WDYLRARWPRNAGLRIDHLLLSPSMAPRLRQAEV-------DRHVRGWEKASDHAPVWIV 255

Query: 302 YD 303
            D
Sbjct: 256 LD 257


>gi|157145931|ref|YP_001453250.1| hypothetical protein CKO_01684 [Citrobacter koseri ATCC BAA-895]
 gi|157083136|gb|ABV12814.1| hypothetical protein CKO_01684 [Citrobacter koseri ATCC BAA-895]
          Length = 300

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 84/286 (29%), Gaps = 45/286 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI            KN      +D+T L    K + ADI+ + E+ +  A ++ 
Sbjct: 50  LRIATYNI-----------GKNEASENVADFTSLNAAIKKIAADIIAVPEVDNKTARSQK 98

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +    I  +        K    +     + +  K      Q   L         A  R
Sbjct: 99  IDQLK-TIADANNYHYAFGKALDFDGGEYGLGILSKYKIQHTQVINLPSG-----DAEQR 152

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL- 202
            A+   + + G    VL +              +    ++  +Q + L D       S  
Sbjct: 153 VALLAQIAVPGFDTPVLVMVTHL---------DWQKDPTMRIEQVRHLLDVSIGDASSDF 203

Query: 203 -----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   ++AGDFN   +           +          +++ +       +   I I
Sbjct: 204 KDIASSIKILAGDFNSTRDEQP--------LKEIGYFFNPVEKQGTDYRTWPAVNPAIDI 255

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+    +     + +          +         SDH P   D +
Sbjct: 256 DHIFTFKGQKWDVKKIDIPH-----NSPAFTWSSASDHLPFIADME 296


>gi|170724257|ref|YP_001751945.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida W619]
 gi|169762260|gb|ACA75576.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida W619]
          Length = 284

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 84/292 (28%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   +       D D+V L
Sbjct: 28  PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHTGRAGNLQKIGDLLN--DFDLVAL 85

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+  +    +  V  +    L + +PL
Sbjct: 86  QEVDGGSLRSGYVNQVEHLAQLGGFPYWYQQLNRNLGHFAQHSNGVLSRLKPHLLEDHPL 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 146 PGPSG-------RGAILVRFGEGEDALIVVMMHLALG-------------ARTRARQLAY 185

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N           +  +  L               +
Sbjct: 186 IRELIGGY----RHQVLMGDMNTHAND----------LLDHSPLRDLGLIAPQVEATFPS 231

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++  +     ++     I              SDH P++++ 
Sbjct: 232 WRPQRCLDHILLSPSLTLERVEVLAQPI--------------SDHLPVAVEI 269


>gi|90419844|ref|ZP_01227753.1| endonuclease/exonuclease/phosphatase family protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335885|gb|EAS49633.1| endonuclease/exonuclease/phosphatase family protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 248

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 78/280 (27%), Gaps = 52/280 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ S+NI            K+           +      LDADIV LQE+       ++
Sbjct: 2   FRVASYNIR-----------KSVGTDWRRRPKQILDVLTELDADIVALQEV-DRRLGDRL 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +   I   T            +       +  +    L +   L+           R
Sbjct: 50  SSLSPGLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLV-----LPALEPR 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    ++I   KI V+ +HL                     +QA+ + D +    E  +
Sbjct: 105 GAALADLQIGDLKIRVVGMHLGLVGLW-------------RKRQARAVLDQLAS-LEEPL 150

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+ GD N+           W T     +         +   +  +    +  D  +  
Sbjct: 151 PTVMMGDLNQ-----------WNTEGGCLAHFAEDHHVIAPGLSFHSQMPFVSFDRIITS 199

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + +                    R +  SDH P+  D  
Sbjct: 200 LDIHVDAAAV----------HSSERARLASDHLPVWADLS 229


>gi|70733598|ref|YP_257238.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf-5]
 gi|68347897|gb|AAY95503.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf-5]
          Length = 292

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 85/298 (28%), Gaps = 58/298 (19%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLD 65
           L         ++RL+S+NI      E    +     +          +   +       D
Sbjct: 22  LASSGLPADSRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHHGRADNLQKIGNLLG--D 79

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVL 124
            D+V LQE    +  +    +                  R+       +  V  +     
Sbjct: 80  FDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLRPWA 139

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            + +PL G K        R A+ +      + + V+ +HL                    
Sbjct: 140 IEDHPLPGPKG-------RGAILVRFGEGPEALVVVMMHLALG-------------ARTR 179

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           ++Q  ++++ I   K      V+ GD N   + L  +            L          
Sbjct: 180 TRQLAYIRELIGGYKHQ----VLMGDMNTHASDLLEHSPLRDLSLLAPQLQA-------- 227

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + R +  +D+ ++  +     ++     I              SDH P++++ 
Sbjct: 228 --TFPSWRPQRCLDHILLSPSLTLERVEVLAQPI--------------SDHLPVAVEI 269


>gi|261365939|ref|ZP_05978822.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996]
 gi|288565482|gb|EFC87042.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996]
          Length = 259

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIATSGADIVCVQELKAQEA---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +   +  H         ++ +AV  K           +G          R
Sbjct: 43  ---DLSDEMKNPHGMHGHWHCA-EKRGYSGVAVYSKRAP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  K+ V+ ++L S       +        L  +        +   K    
Sbjct: 95  F-----VRCDFGKLSVISLYLPSGTSAPERQ-------ELKYRFLDAFYPMLEAMKAEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAVKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|302188968|ref|ZP_07265641.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae 642]
          Length = 291

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 81/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      +    +     +          +   +       D D+V L
Sbjct: 30  PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN--DFDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271


>gi|297571824|ref|YP_003697598.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM
           20595]
 gi|296932171|gb|ADH92979.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM
           20595]
          Length = 290

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 74/278 (26%), Gaps = 45/278 (16%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           ++   +  D++ LQE+ +   +        + +      +   +           +    
Sbjct: 21  EWIAVVSPDVLLLQEVRAPEELVPELIGENYTVIQQACDIKGRAGVAIAVKKGVDV---G 77

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRA-------VELLVEINGKKIWVLDIHLKSFCFLD 171
           +    L    P          + +R A         + V+I   K   +  +L S    D
Sbjct: 78  RISIGLGSDLPDCEPDTDALASWDRPAEPPVDTGRWIEVDIPAYKTTFVSAYLHSGTATD 137

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------- 223
             +     +          L    T + E L   ++AGDFN         +         
Sbjct: 138 QAKMDAKYAHLDRVT--TRLAQLRTNRSEELPHILVAGDFNIVHTERDITNWKSNHNKTA 195

Query: 224 ---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQN 265
                      K  +    +                   +           IDY ++D +
Sbjct: 196 GVLDPEIAYVDKWTETMGYIDVQRYLIGDEQAEYTWWSQRGKAFDNNVGWRIDYHLVDPD 255

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +              D  +S  +R SDH P+ + YD
Sbjct: 256 LAQRA-------HSLRIDRAESYDQRWSDHAPLIVTYD 286


>gi|242054695|ref|XP_002456493.1| hypothetical protein SORBIDRAFT_03g037240 [Sorghum bicolor]
 gi|241928468|gb|EES01613.1| hypothetical protein SORBIDRAFT_03g037240 [Sorghum bicolor]
          Length = 511

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 95/313 (30%), Gaps = 70/313 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +   + ++++SWN+N L        +             ++Q A+  D D++ LQE 
Sbjct: 242 PPLSKDTRALKIMSWNVNGLKALLKSRGF------------SVQQLAQREDFDVLCLQET 289

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +V        + ++           +   ++  A+  +   +  +    +   
Sbjct: 290 KMQEKDVEVIKDTLLDGYTNSFFT-----CSVSKLGYSGTAIISRVKPLSIKYGLGIPDH 344

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
           D+  R         +V +     ++L  ++ +    L  L    +     L    + L+ 
Sbjct: 345 DTEGR---------VVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNYMKELEK 395

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFP 238
                     P ++ GD N     +  +D                 ++T   +   +   
Sbjct: 396 --------SKPVILTGDLNCAHQEIDIHDPAGNRKSAGFTNEERESFETNFLSKGFVDTF 447

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +++     A      +           +DYF++ ++  + +            D      
Sbjct: 448 RKQHPSVVAYSYWGYRHNARKTNKGWRLDYFLVSESIAEKVH-----------DSYILPD 496

Query: 290 KRLSDHCPISIDY 302
              SDH P+ +  
Sbjct: 497 ISASDHSPLGLVL 509


>gi|300774456|ref|ZP_07084319.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300506271|gb|EFK37406.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 340

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 94/296 (31%), Gaps = 87/296 (29%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++++N+                      +  ++ Y K  DADI+ +QE  +   + +
Sbjct: 113 DIKVLTFNVKY----------------GEYGWDKVKDYIKAQDADIILVQEKDTNRVIKR 156

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                                               K   V+ ++   +  +        
Sbjct: 157 DL---------------------------------IKYPSVILKTKHKIVRQAELIDEKA 183

Query: 143 RR-AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS---------------PSCSLLSQ 186
           R  +    ++INGK + +++++L+ F    S+                    P+      
Sbjct: 184 RGNSFYADIDINGKVVRIINVYLEPFRLNKSMFTKLDALGLGNVSTLLSHMTPTFQAHED 243

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           Q + ++  +     S  P ++AGDFN   N     +         D    F        +
Sbjct: 244 QVKRIRKMVDL---SPYPVILAGDFNSVPNSYEYYNL------GKDLQDAFLVAGKGSAS 294

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  + +  + IDY    ++    +I  S+            +  +LSDH P+  ++
Sbjct: 295 SFHDYKVPLRIDYIFSSKS----IIPLSYKV---------DQSVKLSDHYPVIAEF 337


>gi|224074603|ref|XP_002304397.1| predicted protein [Populus trichocarpa]
 gi|222841829|gb|EEE79376.1| predicted protein [Populus trichocarpa]
          Length = 356

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 78/322 (24%), Gaps = 43/322 (13%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV- 80
             LVS+NI      +        +   +  +    +    KNL  D + LQE+  Y++  
Sbjct: 32  FSLVSYNILAQVYVKSSIFPHSPSPCLKWKARSQEILTVLKNLGTDFLCLQELDEYDSFY 91

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN------------VRVLQQSY 128
            K      +   Y                   A  + ++             V +L    
Sbjct: 92  KKNIESYGYSSIYIQRSGQKRDGCGIFYKPDCADLLLEERIEYNDLVDSIQDVSILCDDK 151

Query: 129 PLLGAKDSFSRAGNR--------------RAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
                 +    +  +                +     +      V+ +      +     
Sbjct: 152 HSDTQANGDENSEPKNDPNDPRVRLKRDCVGIMAAFRLKNTPHHVI-VANTHIYWDPEWA 210

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
           +        L  +    K+ +++K E +   ++AGDFN              +       
Sbjct: 211 DVKLAQAKYLLSRVAQFKELVSEKYECMPSVILAGDFNSIPGDKVYEYLVSGSSSSASLA 270

Query: 235 IRFPKEKDSRC-----------NANKNLRNKIPIDYFVM--DQNAYKFLIQESFSEILYN 281
               +     C             N        +DY     D         E       N
Sbjct: 271 ECLDELPIPLCSVYGSTRGEPPFTNCTPDFTNTLDYIFFVPDDQIKPLSFLELPEANSPN 330

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
                      SDH PI  +++
Sbjct: 331 VLGGLPNYYHPSDHLPIGAEFE 352


>gi|148664803|gb|EDK97219.1| deoxyribonuclease I, isoform CRA_a [Mus musculus]
          Length = 301

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 86/289 (29%), Gaps = 34/289 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+ ++NI T  E +  +   +             +       DI  +QE+   + V
Sbjct: 37  AGTLRIAAFNIRTFGETKMSNATLSVY---------FVKILSRY--DIAVIQEVRDSHLV 85

Query: 81  A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A  K+  +       +   +++      +         R   V +L       G +   +
Sbjct: 86  AVGKLLDELNRDKPDTYRYVVSEPLGRKSYKEQYLFVYRPDQVSILDSYQYDDGCEPCGN 145

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQ 197
              +R    +       ++    I                 + +    +   L D ++  
Sbjct: 146 DTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEIDALYDVYLDV 193

Query: 198 KKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            ++      +  GDFN   +Y+ ++      +  +        +       + +      
Sbjct: 194 WQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTVTSTHCAY--- 250

Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
            D  V+     +  ++  S     +  +   S    + +SDH P+ +  
Sbjct: 251 -DRIVVAGALLQAAVVPNSAVPFDFQAEYGLSNQLAEAISDHYPVEVTL 298


>gi|313159067|gb|EFR58442.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 348

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 96/316 (30%), Gaps = 69/316 (21%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           YV +++        + +  +R+ + N+N   +    S+              + +  ++ 
Sbjct: 85  YVSSMIQLPDFNAPAGSHDIRIATLNVNGFRQLGPKSIT----------AAAVAEMMRHE 134

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
             D++ LQE          FP ++    +S       S+ +         AV  +   + 
Sbjct: 135 QVDVLCLQEFLDDGE----FPADSIGALFSRRMPYFVSEGNG--------AVASRYPILD 182

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC---------------- 168
            +        + +        +   + + G  + +  +HL++                  
Sbjct: 183 CKYVRFPDTSNDY--------LRADLLVEGDTLRIFSVHLQTSGIAQLRRRFQKDYNREA 234

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
            +DS+      +  + + Q + ++    +   S  P ++AGDFN   +     +      
Sbjct: 235 PVDSMLGAVDRNSRIRAAQVREIRA---ETDASPYPVILAGDFNDTPSSYTYREM----- 286

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                   F +  +      + L   + IDY                 +  +        
Sbjct: 287 -KGALTDGFRRCGNGYGGTFRYLGGLLRIDYVFY--------------DDTFECVRYYMP 331

Query: 289 GKRLSDHCPISIDYDF 304
            + +SDH  +  +  F
Sbjct: 332 SEVVSDHKVVIAELRF 347


>gi|325964365|ref|YP_004242271.1| metal-dependent hydrolase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470452|gb|ADX74137.1| metal-dependent hydrolase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 275

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/293 (11%), Positives = 65/293 (22%), Gaps = 47/293 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            VR+V+WN+                         +     +   DIV L E  +    ++
Sbjct: 19  TVRIVTWNVW------------GRYGPWQEREAAVIATLTDARPDIVVLTESWTTAEDSQ 66

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                              ++ D +     A+  R                  +    G 
Sbjct: 67  CARLAGPLGLPHHAFSGVPAQEDESALSGVAVLSRWPI------------TAQAGMDFGA 114

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            R  +  +      I V    + ++                  +  + L + +    +  
Sbjct: 115 LRVQQATIAGPRGPITVYGGVMDAWWPDQG---------RQRQEAVRALLEHLKTSWDDR 165

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------- 253
            P V+ GDFN   +         +   P   L  +   +           N         
Sbjct: 166 TPLVVCGDFNADPDSDEIRMFTGRVAAPVPGLSFYDAWEAGGTERGCTWANTNPWATQLL 225

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                IDY                             G   SDH  +  D  +
Sbjct: 226 WPDRRIDYVFTG---MPRRGGAGHPLAAELLGTRPLHGMYPSDHLALQADLRY 275


>gi|322378535|ref|ZP_08052983.1| exodeoxyribonuclease [Helicobacter suis HS1]
 gi|321149049|gb|EFX43501.1| exodeoxyribonuclease [Helicobacter suis HS1]
          Length = 306

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 77/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RLVSWN+N L                         + +   ADI  +QE          
Sbjct: 52  MRLVSWNVNGLRACMQKGFC---------------DFLEQSQADIFCVQETKMQQE-QAS 95

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    + +F+++ +   +          + +    K   +       +   D+  R    
Sbjct: 96  FCFEGYEVFWNSAQKKGY----------SGVLTLSKIAPLQVSYGIGIAEHDTEGR---- 141

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       ++++++  +                      Q L            
Sbjct: 142 -----VITCEYPNFYLVNVYTPNAQRGLLRLPYRLEWERSFRGFLQNLMQ--------KK 188

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N   N                     D ++ +     +  F     ++  + 
Sbjct: 189 AVVVCGDLNVAHNEIDLTNPQSNRYNAGFSDPERDAFRQLLNLGLIDTFRHFYPTKAESY 248

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  Q     L        +             SDHCP+ 
Sbjct: 249 TWWSYINQARAKNIGWRIDYFLTSQTLNSCLQSAYIYNHIL-----------GSDHCPVG 297

Query: 300 IDY 302
           +D 
Sbjct: 298 LDL 300


>gi|304410326|ref|ZP_07391945.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS183]
 gi|307301963|ref|ZP_07581721.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica BA175]
 gi|304351735|gb|EFM16134.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS183]
 gi|306914001|gb|EFN44422.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica BA175]
          Length = 398

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/366 (11%), Positives = 92/366 (25%), Gaps = 88/366 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +++ S N+    E            S  +       L ++  +   DIV  QE+ S   +
Sbjct: 30  IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGFQEVFSPEPL 89

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
            ++  +    + ++                  A+A R   V +         +     S 
Sbjct: 90  KRIASEQG-LVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSS 148

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPS---------------- 180
               +R+ +   VE+    K     +H KS     +LE     +                
Sbjct: 149 EFTFSRKVLRATVEVPHIGKCDFYVVHFKSKRAGLALEPKRFENQPLGFDNSAPAASMKL 208

Query: 181 --------CSLLSQQAQWLKD----------WITQKKESLVPFVIAGDFNRKI------- 215
                      L + A  ++            + +++ S  P ++ GDFN  +       
Sbjct: 209 HSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQASKHPVIVMGDFNDSLTMGALDA 268

Query: 216 --------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN--------------------- 246
                   +           +        F + +                          
Sbjct: 269 LTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDSLAGNTAYHRE 328

Query: 247 ----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHC 296
                +        +DY ++         +     + Y   D         R    +DH 
Sbjct: 329 HRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHA 388

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 389 PVIVEL 394


>gi|283807250|pdb|3L1W|A Chain A, The Crystal Structure Of A Functionally Unknown Conserved
           Protein From Enterococcus Faecalis V583
 gi|283807251|pdb|3L1W|B Chain B, The Crystal Structure Of A Functionally Unknown Conserved
           Protein From Enterococcus Faecalis V583
 gi|283807252|pdb|3L1W|C Chain C, The Crystal Structure Of A Functionally Unknown Conserved
           Protein From Enterococcus Faecalis V583
 gi|283807253|pdb|3L1W|D Chain D, The Crystal Structure Of A Functionally Unknown Conserved
           Protein From Enterococcus Faecalis V583
 gi|283807254|pdb|3L1W|E Chain E, The Crystal Structure Of A Functionally Unknown Conserved
           Protein From Enterococcus Faecalis V583
 gi|283807255|pdb|3L1W|F Chain F, The Crystal Structure Of A Functionally Unknown Conserved
           Protein From Enterococcus Faecalis V583
          Length = 257

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 82/286 (28%), Gaps = 48/286 (16%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ ++N+        V    +   + +     + Q     D  +  +QE+          
Sbjct: 2   KIATYNVR-------VDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLKA 54

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-----R 139
                   Y+T   ++  +         AI   ++ V+ +   Y  L             
Sbjct: 55  --------YTTFTCLSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPEA 106

Query: 140 AGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              R A+  L +         V+++HL           +     +  +   + L D I Q
Sbjct: 107 GCPRIALWGLFKETTQNTPFLVINVHL--------DHISAHARLAGXTVILEELHDKIAQ 158

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNKI 255
                 P ++ GDFN + +    +    K      N +    P+         K      
Sbjct: 159 Y-----PTLLXGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNFTYTKPWAELE 212

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            IDY  +          + +             G+  SDH P+  +
Sbjct: 213 EIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 248


>gi|299753114|ref|XP_001833071.2| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea
           okayama7#130]
 gi|298410149|gb|EAU88760.2| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea
           okayama7#130]
          Length = 304

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 79/287 (27%), Gaps = 54/287 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                +R+ +WN+  L+                        Y +  DADI+ L E    +
Sbjct: 67  PDEGTLRIATWNVCGLAASMRKGFKY---------------YVEAEDADILVLTETKVND 111

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A    K+ +          +     S+   +   A+  K   +    Y L G  +   
Sbjct: 112 IPADPALKSRY---------PHQYWSISDKKTYAGTAILSKVKPL-HVDYKLPGHPNPKG 161

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R          + +  +  +++  ++ +        +      +      + L       
Sbjct: 162 RI---------LTLEFENAYLIGTYVVNAGQELKTMDAKKEWQTHFEAYIREL------- 205

Query: 199 KESLVPFVIAGDFNRKINY--LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            +   P +  GD N              +  +              S    ++   N   
Sbjct: 206 -DKKKPVIWTGDLNVAPTEKEDDPERPQFVDVWRKLHPDLQHYTYWSYRFQSREKGNGWR 264

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D FV+       + +    + +Y            SDH P+ +D +
Sbjct: 265 LDMFVLSTKLVDRVKKCEIRDEIY----------GASDHVPLIMDIE 301


>gi|56342183|dbj|BAD73859.1| deoxyribonuclease I [Heterodontus japonicus]
          Length = 282

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 88/301 (29%), Gaps = 31/301 (10%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            +    + C  S    +++ ++NI +           +S     +   ++    +    D
Sbjct: 4   LITVLTLACVLSTVHSIQICAFNIKSFG---------DSKMSNATIANIIVNIVQRY--D 52

Query: 68  IVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           I+ +QE+   + +AV  +  K      +    + +     S+         R   V V  
Sbjct: 53  IILIQEVRDENLSAVKALMNKLNSPSAHIYSYIASDPLGRSSYKERYLFIYRNTMVSVTN 112

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                 G++DS     +R    +        +    I  +                SL  
Sbjct: 113 SYLYDDGSEDSGHDIFSREPFLVKFSSPYSAVHDFVIMPQHTSP------------SLAI 160

Query: 186 QQAQWLKD--WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           ++   L D  +  ++K      +I GD N   +Y+   D     +  +        +   
Sbjct: 161 KEIDALYDVFFDARRKLGTDNMLIMGDLNAACSYVKPADWADIRLRKDSQFQWLIPDSAD 220

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--KRLSDHCPISID 301
                        I    +       +I  S +   + +    +      +SDH P+ + 
Sbjct: 221 TTTNIATKCAYDRI--IAVGSEMKNAVIDGSTAIYNFGKVFNLNNEMTLAVSDHYPVEVS 278

Query: 302 Y 302
            
Sbjct: 279 L 279


>gi|168031629|ref|XP_001768323.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680501|gb|EDQ66937.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/338 (13%), Positives = 97/338 (28%), Gaps = 86/338 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +  + +SWN N+             + R  ++   +    + LD D++ +QE+   +A  
Sbjct: 38  EPTKFMSWNTNSF------------LLRLKTNREEVLSLLRRLDPDVIAIQEVRIPSAGR 85

Query: 82  KVFPKNT----------------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           K  P+N                      S   L ++    S +D             +++
Sbjct: 86  KGEPRNHGELKDDTNSAREDKQIMMRALSVSPLSDYGVWWSLSDSKYG-----GTALLVK 140

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
            S   +    S        A   ++        +L+ ++ +  + D          +   
Sbjct: 141 HSCSPISILYSLDDKLKHEADGRVILAEFHSFRLLNTYVPNNSWKDDDNG-----FARRR 195

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNR-------------------------------K 214
                + +++ +      P +  GD N                                 
Sbjct: 196 AWDARMIEFLKR--PHKKPLIWCGDLNVSNEVIDVSHPDFFSNAKLQGYTPPNAEDIGQP 253

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPK----------EKDSRCNANKNLRNKIPIDYFVMDQ 264
              LG    F + +   D +  +               S     K    ++ IDYF++ +
Sbjct: 254 GFTLGERQRFAECLSKGDLVDTYRHLHKQQDFDAGFTWSGNPVGKYRGKRMRIDYFLLSR 313

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                L+             I+  G   SDHCPI+++ 
Sbjct: 314 KLLDRLVSSDIH-----GQGIEQEGFCGSDHCPITMEI 346


>gi|154492028|ref|ZP_02031654.1| hypothetical protein PARMER_01659 [Parabacteroides merdae ATCC
           43184]
 gi|154088269|gb|EDN87314.1| hypothetical protein PARMER_01659 [Parabacteroides merdae ATCC
           43184]
          Length = 299

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/317 (8%), Positives = 81/317 (25%), Gaps = 51/317 (16%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            +++L         +  +K+R++S+NI    E +                     + K  
Sbjct: 11  LLISLFPITSNGQPARKEKLRVISYNIWNGFEHDAS------------RRANFIDWIKGQ 58

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-V 123
             DI+ + E+  +         + +           H       +    + +       V
Sbjct: 59  QPDILAITELVGFTEKNLGQLASEY----------GHKYYAIVKEEGYPVGITSNKPITV 108

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL------ENTY 177
           +++            +      +   +  +  K  + +  + +    D+          +
Sbjct: 109 VKKQVEDFWHGMLHVKTYGLDIIVTHLSPHDWKFRLKEAQMLTKYIQDNQLDNCMVMGDF 168

Query: 178 SPSCSLLSQQAQWLKDWIT---QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
           +      +   +     I    +       +    D   +++Y   +      +     L
Sbjct: 169 NAYSPFDADWVETHAQLIKNKQKWDAEQETYRNMRD--GRLDYSVLSQFLSIGLTDICRL 226

Query: 235 IRFPKE--KDSRCNANKN-------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                +          +              +DY ++  +     +              
Sbjct: 227 YVPADKRTTFPTAFLYRWQHGDTRLHGISERLDYILVSPSLVSRCVDAHIHN-------- 278

Query: 286 KSRGKRLSDHCPISIDY 302
               + +SDH P+S+D 
Sbjct: 279 GIETEGISDHYPVSVDL 295


>gi|86156859|ref|YP_463644.1| exodeoxyribonuclease III [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773370|gb|ABC80207.1| exodeoxyribonuclease III [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 262

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 78/303 (25%), Gaps = 80/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    + ++      D+V LQE+ +  +    
Sbjct: 1   MKIGTWNVNG----------------IRAREAQVGEFIAREGPDVVCLQEIKAPPS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  S   L  +         ++ +A+  +     ++   +    D  +R    
Sbjct: 41  ------KVPPSLCELEGYWCLWHGETAYSGVALLVRKAIAPERPAFVHPPFDLETR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  E+ G  + V  I++ +               +   +  + ++ +    + S  
Sbjct: 91  ---VATCELGG--VTVASIYVPNGG----------KDLAAKLRFLEAMERFAADAQASGR 135

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                    L      ++ I  +  +        +     
Sbjct: 136 PLVLCGDLNVARTDMDVHPKERKAGAIGQLPEERALFERILAHGLVDVGRALDPANEGLF 195

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDY              S                  SDH P+ 
Sbjct: 196 TWWAPWRNLRQRNIGWRIDYV-----------LASAPLAASATRCRVLADFGTSDHAPVV 244

Query: 300 IDY 302
            ++
Sbjct: 245 AEF 247


>gi|306836858|ref|ZP_07469815.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
 gi|304567265|gb|EFM42873.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
          Length = 443

 Score = 79.6 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 89/301 (29%), Gaps = 41/301 (13%)

Query: 37  QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-----------YNAVAKVFP 85
             G +    +          +      LDAD++ L E+               A+ ++  
Sbjct: 64  NRGKTRGAYTESALEDQERKIVAAINGLDADVIGLSEIEDGYAVTGDFDQRDKALKRLTE 123

Query: 86  KNTWCIFYSTERLINHSK----RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K            +            + I TA    K  V+ + +S      + S +   
Sbjct: 124 KLNEAAGTEKWAFVPSPSKDQVPAHPDVIRTAFIYHKDVVKPVGESRIFQDPRFSGTARE 183

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFC----FLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                   +  + +    +  H KS        +   +    + ++ + QAQ + D + +
Sbjct: 184 PLAQEFQPLNSDDESFVAVANHFKSKGSVAKGDEDSGDGQGNNPNVRNAQAQAVLDALHK 243

Query: 198 KKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           + +    P    GDFN   +    +      +  ND      ++  +   + +       
Sbjct: 244 QDDWKDKPLFTLGDFNTYTHETALD------VFRNDGFTVPAEKYGADT-SYQFDGLLGT 296

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------------LSDHCPISIDY 302
           +D+ + ++ A   L       I  +E       +R               SDH P+ + +
Sbjct: 297 LDHVLANEVASGALDDAQVWNINADEPVAFEYSRRNYNAVDFYDDSPFRASDHDPVKVGF 356

Query: 303 D 303
            
Sbjct: 357 T 357


>gi|257465990|ref|ZP_05630301.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917146|ref|ZP_07913386.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691021|gb|EFS27856.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563]
          Length = 250

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 81/301 (26%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                        +Y +  DADI  LQE        ++
Sbjct: 1   MKLISWNVNGIRACLKKGFM---------------EYFEAQDADIFCLQETKCSAGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +       +   D   R    
Sbjct: 46  -DLKGYHQYWN----------YAVKKGYSGTAIFTKKEPISVSYGLGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +++ ++  +        +               L +          
Sbjct: 91  -----VITLEFEDFYMVTVYTPNSKNELERLDYRMVWEDEFRSYLAKLNE--------AK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +  +        F      R +A 
Sbjct: 138 PVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERSKFTELLKAGFTDSFRYLYPDRLHAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+  +  + + +                 +  SDHCP++
Sbjct: 198 SWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEIH-----------AEQEGSDHCPVA 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|331006177|ref|ZP_08329501.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989]
 gi|330420008|gb|EGG94350.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989]
          Length = 271

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 97/314 (30%), Gaps = 78/314 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           ++++S N+N +       ++                + K +DAD++ LQE+         
Sbjct: 1   MKVISINVNGIRAAARKGMFG---------------WLKKVDADVICLQELKAQPDQIED 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            ++    +  ++ +     +S            A+      +    +  +  +  +    
Sbjct: 46  SLYHPEGYYSYFHSAEKKGYSGVGIYCKEKPK-AIHMGLGAIDDADWEDVDREGRY---- 100

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   ++++ K + V+ +++ S    +  +              +  +  +   +  
Sbjct: 101 --------IQVDFKDVSVVSLYMPSGSAKEERQ-------EFKYVMMEKFEAVLRSMQRK 145

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWK-----------------------TIDPNDSLIRFP 238
              F+I GD+N     +   +                             + N   +   
Sbjct: 146 KREFIICGDWNIAHKKVDIKNWRGNQKNSGFLPEERSWMDWLLNEEDSLRNDNLQFVDAF 205

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +  +   +      N+           IDY ++ +     ++  S         D+  + 
Sbjct: 206 RIINQEEHQYTWWSNRGQAWANNTGWRIDYHIVSKGLRDKVVAGS---------DLIYKE 256

Query: 290 KRLSDHCPISIDYD 303
           +R SDH P++I+YD
Sbjct: 257 ERFSDHAPLAIEYD 270


>gi|84687987|ref|ZP_01015851.1| exodeoxyribonuclease III, putative [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664019|gb|EAQ10519.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium
           HTCC2654]
          Length = 262

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 73/306 (23%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                R  +D   + +   +   D++ LQE  S      
Sbjct: 2   SFTLATWNIN--------------SVRLRADL--VSRLLADEAPDVLCLQECKSP----- 40

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              K    IF +                +  +A+  K                +      
Sbjct: 41  -VDKIPHDIFKA---RGYTHMVARGQKGYNGVAILSKLPLEDAGDQDFARLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +   +E     + + + ++ +    D  +   +            ++DW   +K   
Sbjct: 93  ---IAAKLENG---VTIHNFYVPAG--GDKPDREINEKFGQKLDYLTEMRDWFHAEKPEK 144

Query: 203 VPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRCNA 247
              ++ GD N          +    K +                   +   ++       
Sbjct: 145 A--ILVGDLNIAPREDDVWNHKQLLKIVSHTPVEVEHLGAAQDAGKWVDITRQDIPEGLL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +             +          ++ SDH P
Sbjct: 203 YSWWSYRSPDWDTADKGRRLDHIWATPDISNAAHGSRILRDV-------RGWEKPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|325088036|gb|EGC41346.1| glucose-repressible alcohol dehydrogenase [Ajellomyces capsulatus
           H88]
          Length = 769

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/358 (10%), Positives = 89/358 (24%), Gaps = 75/358 (20%)

Query: 22  QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +K   +S+N      +  +      +          L+    K  +ADIV LQE+   + 
Sbjct: 384 EKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 443

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++     +              K + + +         
Sbjct: 444 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 503

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++      ++G+++ V+++HL        ++   +  
Sbjct: 504 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 563

Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207
                 Q       I    +                                    P +I
Sbjct: 564 LMEEVTQLAEKYSKIPACTDKTAFRFSEPEHSTDGGGTATPVEPAPSVEYSSGSHIPLII 623

Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247
            GDFN                  ++       +  +        F  +            
Sbjct: 624 CGDFNSYPGSAVHELMSRGRLIEDHPDLEKRLYGNLSRVGMSYPFNLKSAYGAIGELDFT 683

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304
           N        IDY     +A +        +  Y +           SDH  +  ++ F
Sbjct: 684 NYTPDFADVIDYIWYTSSALQVTGLLGAVDKEYLQRVPGFPNYHFPSDHLALMAEFSF 741


>gi|295394280|ref|ZP_06804510.1| endonuclease/exonuclease/phosphatase [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294972864|gb|EFG48709.1| endonuclease/exonuclease/phosphatase [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 843

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 89/346 (25%), Gaps = 65/346 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGV----------------SLWKNSVKRTTSDYT--- 55
           P +  ++   +L S+N+       G                 ++      R  ++     
Sbjct: 504 PASPELSGG-KLASFNVLNFFPTTGDQLKGCSYYKDREGNPVTVNGGCDARGAANLESLS 562

Query: 56  ----LLRQYAKNLDADIVFLQEMGSYN-----------AVAKVFPKNTWCIFYSTERLIN 100
                +      +D  ++ L+E+ +              + +   K      ++      
Sbjct: 563 RQQIKILNAINQMDVAVLSLEELENSEKFGKNRDFAISYLVRQLNKQAGYGKWAAVTSPK 622

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIW 158
                 ++ I T    +  +      S  L     S +RA       ++   +  G+   
Sbjct: 623 SVPATGDDVIRTGFIYQPAHADTEGTSEILDNPAFSNARAPLAQEFVLKKDGKTTGESFV 682

Query: 159 VLDIHLKSFCFLDSLENTYSPSCS-----LLSQQAQWLKDWITQKKES--LVPFVIAGDF 211
            +  H KS        N  S            +QA+ +  +    K+        + GDF
Sbjct: 683 AVVNHFKSKGSGKGPGNEDSGDGQGNSNADRVKQAKAVVTFADAMKKKAQTDNVFLLGDF 742

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N         + +                                +D+ + +  A K L 
Sbjct: 743 NSYTQEDPMQEFYKAGYVDAGEKFEAEP-------TYVFGGQLGSLDHVLANDAAAKGLK 795

Query: 272 QESFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303
                 I   E       +              R SDH P  +D+D
Sbjct: 796 GAYTWTINSRESVALEYSRYNYNVTNFYDPSPFRSSDHDPTIVDFD 841


>gi|149246876|ref|XP_001527863.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146447817|gb|EDK42205.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 461

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 102/331 (30%), Gaps = 55/331 (16%)

Query: 24  VRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---Y 77
             ++S+N+   + +      SL +  +   +  + L+ +  K ++ DI+  QEM      
Sbjct: 134 FSVMSYNLLLRHYMWPHVYQSLPQEYLDWDSYRFPLINKTIKQMNCDIMCFQEMEYFLYK 193

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------------ 125
              +K+FP + +  F+  +  IN S R S       I +  K  +VL             
Sbjct: 194 KFWSKLFPTSEYESFFIQKSSINQS-RSSEKIDGVGIFINTKRFQVLDERKINFAKLVMK 252

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                   KD  SR   R  V L+++++ K      +++ +     S +           
Sbjct: 253 HQTKFQFTKDFVSRLLPRNTVALILKLHDK-YTDKIVYVTNTHLYWSPQFNDVKVLQTKL 311

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK------ 239
                LK++I +  +     +  GD N   N         + +    +   F        
Sbjct: 312 L-LAELKNYIKENYK-DASVIFLGDLNSNFNS-DVYRLLSEGLVDFTTAKSFSGKNYGLG 368

Query: 240 ------------------------EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                                   + +     +        +D+  + +N +   +    
Sbjct: 369 NALIDHNGKIQSPFNLSSAYQTLKDTNMLNFTSFAPSFADVLDHIFVSENIHVHKVISGV 428

Query: 276 SEILYNE--DDIKSRGKRLSDHCPISIDYDF 304
                           +  SDH PI+ +  +
Sbjct: 429 DNDYCKNLPVRGFPNDQFPSDHIPIAAEVSY 459


>gi|115402263|ref|XP_001217208.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114189054|gb|EAU30754.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 604

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 74/346 (21%)

Query: 6   VLALVFFLVPCTASVAQKVR---------LVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + AL       TA++   +            S+N+  L+               ++  + 
Sbjct: 270 LTALTVTGSNETAAMPTTLTSNGSCSAMAFGSYNVENLTPN-------------STHLSK 316

Query: 57  LRQYAKNL--DADIVFLQEMGSYNAV-----------------AKVFPKNTWCIFYSTER 97
           +  +         ++FLQE+   N                              F + + 
Sbjct: 317 IAGHIVEYLKCPTVMFLQEIQDNNGATNDGVVSANRTLSTLIREIQKQGGIKYDFVNIDP 376

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQ------------------QSYPLLGAKDSFSR 139
           +      +   +I  A       VR+                    +  P L    + + 
Sbjct: 377 VDGRDGGEPGGNIRVAYLYDPSVVRLRNANPGSSTDANEVLSGAELKYNPGLIDPSNSAW 436

Query: 140 AGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKD 193
           A +R+ +    E      + + +++H  S     S+E    P         S QA+ + +
Sbjct: 437 ADSRKPLAAAWETLEGQARFFTVNVHFTSKGGGSSIEGDARPPVNGGIDQRSAQAKVVGN 496

Query: 194 WITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           +I++          + AGDFN            +  +     L        +        
Sbjct: 497 FISEILSEDSSAKIITAGDFNEFAFARPLE--VFSAVSGLQDLDDVAGVSKTERYTYLYD 554

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            N   +D+  +          E         +   +  ++ SDH P
Sbjct: 555 ANCQQLDHMYVSDALTTEAQIEHIHV-----NTWVAYEEQASDHDP 595


>gi|259417747|ref|ZP_05741666.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B]
 gi|259346653|gb|EEW58467.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B]
          Length = 262

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/308 (9%), Positives = 67/308 (21%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
              L +WNIN                       ++ +  +    D++ LQE  S      
Sbjct: 2   SFTLATWNIN----------------SVRLREPIVIKLLQEEGPDVLCLQECKSPVEKIP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F +  +                     +  +A+  +                +    
Sbjct: 46  MEAFRELGYQHMI-----------ARGQKGYNGVAILSRLPIEDVGDKDFASLGHARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V   +E     + + + ++ +    D  +   +            ++DW     +
Sbjct: 93  -----VAGRLENG---VTIHNFYVPAG--GDEPDREKNVKFGQKLDYLTEMRDW--FHAD 140

Query: 201 SLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRC 245
                V+ GD N         D                    +          ++     
Sbjct: 141 RPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLAQVMEAGGWADVTRKDIPEG 200

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +                        ++ SDH
Sbjct: 201 QLYSWWSYRAKDWDAADKGRRLDHVWTTPDITNAAHSS-------RILRGARGWEKPSDH 253

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 254 APVFATFD 261


>gi|227502024|ref|ZP_03932073.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49725]
 gi|227077308|gb|EEI15271.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49725]
          Length = 269

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/294 (9%), Positives = 72/294 (24%), Gaps = 47/294 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   +            D D++ LQE    +     
Sbjct: 1   MRITTWNIN----------------SVRTRAQRALDLLHTHDIDVLCLQETKVKDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +A+  K       +        +      +
Sbjct: 41  ------KFPRVAFEDAGYHVTCHGLNQWNGVAIISKEQPEEVFTGFPHQPGFAKDPEKPQ 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDWIT 196
                 +    + + +  +++ +   +      Y           +    Q++ L     
Sbjct: 95  DREARALGARIRGVEIWSLYIPNGREITDRHYDYKLDFLYQLARYAAGRAQSKLLLTGDF 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL----- 251
                         F  K +        ++ ++         +  + +     +      
Sbjct: 155 NIAPRDEDVWDIEAFRGKTHVTEPERAAFQMLEEAGLEEVTRRFTEDQRYTYFDYKGMRF 214

Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                + ID+ +      K              D  +  G++ SDHCP+  D+D
Sbjct: 215 HKNEGMRIDFQLASPPLAK-------HVTGARVDMEERAGEKTSDHCPLHADFD 261


>gi|158341378|ref|YP_001522543.1| hypothetical protein AM1_G0049 [Acaryochloris marina MBIC11017]
 gi|158311619|gb|ABW33229.1| hypothetical protein AM1_G0049 [Acaryochloris marina MBIC11017]
          Length = 401

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 89/311 (28%), Gaps = 53/311 (17%)

Query: 5   YVLALVF----FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           + L+L      F+     ++A+++++V++N+ + ++ +              D   +   
Sbjct: 14  FSLSLCLVFSDFVFADGCALAEELKVVTFNVESGNDTD--------PNMVARDMQAIPDV 65

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 D+  L E+ + +A              + +         S       I   K  
Sbjct: 66  ------DLWGLSEVENQSAADTFLQA-------AGDSNFESILGTSGGSDRLQIIYDKSK 112

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           +  L  S   L           R+ +    E+       L                   S
Sbjct: 113 LNKLNSSPMELTGIGGD-----RKPLVEEFEVISDNTKFLFAVNHF----------NRGS 157

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSL 234
                +QA+  +DW  ++    +P V  GD+N   +             F + +      
Sbjct: 158 ARKRQEQARKFRDWAGRQ---TLPVVAVGDYNFDFDISAMDGNPAFEIFFEEPVFSWARQ 214

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                          N      +D+  +  +A K+  Q     +        +     SD
Sbjct: 215 TCLSSNTCPSTGTQCNECFDGLLDFIFLSGDAKKWSNQSEI--LFKGSSFCDNDPTGASD 272

Query: 295 HCPI--SIDYD 303
           H P+   ID D
Sbjct: 273 HFPVQAIIDLD 283


>gi|15612480|ref|NP_224133.1| exodeoxyribonuclease III [Helicobacter pylori J99]
 gi|4156036|gb|AAD06994.1| EXODEOXYRIBONUCLEASE [Helicobacter pylori J99]
          Length = 250

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGIDIKEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                     + +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|146294023|ref|YP_001184447.1| endonuclease/exonuclease/phosphatase [Shewanella putrefaciens
           CN-32]
 gi|145565713|gb|ABP76648.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens
           CN-32]
          Length = 396

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 45/371 (12%), Positives = 93/371 (25%), Gaps = 93/371 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +++ S N+    E            S  +       L ++  +   DIV  QE+ S   +
Sbjct: 23  IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFIAHRQPDIVGFQEVFSPEPL 82

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
            ++  +     +++                  A+A R   V +         +     S 
Sbjct: 83  KRIAREQG-LGYFAVVDEPTLISDYIYRSPVVALASRYPIVEISSVEPDTRLVAAMGLSS 141

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176
             A +R+ +   VE+    K     +H KS     +LE                      
Sbjct: 142 EFAFSRKVLRATVEVPHIGKCDYYVVHFKSKRAGLALEPKLFEHQPLGHQPLSLDNLAPA 201

Query: 177 ------------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRKI-- 215
                                S      +A  L    + +++ES  P ++ GDFN  +  
Sbjct: 202 ASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQESKHPVIVMGDFNDSLSM 261

Query: 216 -------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------------- 246
                        +           +     +  F + +                     
Sbjct: 262 GALDALTIQGESIHSNDIKAAGLGHLSDAALVAVFAQYQLKDAYELFIEANLRDSLTGNT 321

Query: 247 ---------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKR 291
                     +        +DY ++         +     + Y   D         R   
Sbjct: 322 AYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAY 381

Query: 292 LSDHCPISIDY 302
            +DH P+ ++ 
Sbjct: 382 STDHAPVIVEL 392


>gi|327356664|gb|EGE85521.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Ajellomyces dermatitidis ATCC 18188]
          Length = 779

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/358 (11%), Positives = 88/358 (24%), Gaps = 75/358 (20%)

Query: 22  QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K   +S+N      +  +      +          L+    K  +ADIV LQE+   + 
Sbjct: 384 DKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 443

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++     +              K + + +         
Sbjct: 444 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 503

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++      ++G+++ V+++HL        ++   +  
Sbjct: 504 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 563

Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207
                 Q       I    +                                    P +I
Sbjct: 564 LMEEVTQLAEKYSKIPACTDKTAFRFSEPENSADGDGTATPVEPAPSVEYSSGSQIPLII 623

Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247
            GDFN                  ++       +  +        F  +            
Sbjct: 624 CGDFNSYPGSAVYELMSRGHLIEDHPDLEKRLYGNLSRRGMSYPFNLKSAYGAIGELDFT 683

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304
           N        IDY     NA +        +  Y +           SDH  +  ++ F
Sbjct: 684 NYTPDFADVIDYIWYTSNALQVTGLLGAVDKSYLQRVPGFPNYHFPSDHLALMAEFSF 741


>gi|224088166|ref|XP_002308351.1| predicted protein [Populus trichocarpa]
 gi|222854327|gb|EEE91874.1| predicted protein [Populus trichocarpa]
          Length = 602

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/348 (12%), Positives = 88/348 (25%), Gaps = 64/348 (18%)

Query: 19  SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           S      ++S+NI +   +  E  S   +           L +      ADIV LQE+ S
Sbjct: 247 SSTGTFTVLSYNILSDVYATNETYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQS 306

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL----- 131
            +      P+     + +  +   +     N       A   +  R        +     
Sbjct: 307 DHYEEFFAPELDKHGYQALYKRKTNEVYAGNTHTIDGCATFFRRDRFSHVKKYEVEFNKA 366

Query: 132 --GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------------Y 177
                D+   +  R+     +  +   + V+     S   +D+                +
Sbjct: 367 AQSLTDALVPSAQRKTALNRLVKDNVALIVVLEAKFSNQGVDNPGKRQLLCVANTHINVH 426

Query: 178 SPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                +   Q   L   + +    + +P ++ GDFN       ++      +DP    + 
Sbjct: 427 QDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLAMGKVDPLHPDLV 486

Query: 237 FPKE-----------------------------------------KDSRCNANKNLRNKI 255
                                                         +     N       
Sbjct: 487 VDPLGILRPHNKLTHQLPLVSAYSSFARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIG 546

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +DY      +     + E   E    +D      +  SDH  +  ++
Sbjct: 547 ALDYIFYTADSLMVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 594


>gi|218440705|ref|YP_002379034.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
 gi|218173433|gb|ACK72166.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
          Length = 333

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 92/321 (28%), Gaps = 40/321 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWK--NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +  ++ ++N+  L+            S        T + Q  + + ADI+  QE+    A
Sbjct: 6   KTFKVGTFNLYNLALPNQTFHRFLHYSNHDYELKTTWIAQQLERMQADIIGFQEVIHTEA 65

Query: 80  V-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +   +     +           + K          I   +       +++  +   +   
Sbjct: 66  LLETIALAKGYEKMNLVVPETENYKSTVALACKFPILDYQIYTVFPPEAHFNVQGVNIPF 125

Query: 139 RAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---- 193
              ++  + + +++  K I  +  +HLKS   +                QA+ L      
Sbjct: 126 ERFSKPILSVRIKLTQKIICTLFVVHLKSKAPIIPGNCDPRDPAERARGQARALILRAAE 185

Query: 194 -------WITQKKESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDP 230
                   I   K++  P ++ GD N                          + W  +  
Sbjct: 186 ATALRMILIETLKDTNHPVIVMGDVNDGGLAVTSQIITGDPPRKNERREYKKEAWDILLY 245

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-------QNAYKFLIQESFSEILYNED 283
           +   I+  +   +    + +  +   +D+ ++         N    +   S       +D
Sbjct: 246 SVKDIQERQSHGNYYYTHIHNGHYQSLDHILVSQEWIAHNPNRLGRVKYVSVFNDHLIDD 305

Query: 284 DIKSRGK--RLSDHCPISIDY 302
            +         SDH  +   +
Sbjct: 306 TLSDEELPCWQSDHGQVVASF 326


>gi|89902688|ref|YP_525159.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118]
 gi|89347425|gb|ABD71628.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118]
          Length = 263

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 75/274 (27%), Gaps = 58/274 (21%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  +      D + +QE+       K    +    F     L  H    +    ++ + +
Sbjct: 20  LEAWLTKTQPDCICVQEV-------KAQALDVQDRFEHLAGLRGH-FHFAEKKGYSGVGL 71

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             ++     +        D+  R      VEL  +    K  ++  +  S    +  +  
Sbjct: 72  YSRHEPSDVRVGYGSSQFDAEGRY-----VELRFDTPSAKRSIISCYFPSGSSGEERQQA 126

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                         L        ++   F++ GD N                        
Sbjct: 127 KFRFLEEFYLHLAQL--------KNGREFILCGDVNIAHQEIDLKNWKGNRKNSGFLPEE 178

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNK---------IPIDYFVMDQNAYKFL 270
                K +     +  + + + +  + A     N+           +DY +         
Sbjct: 179 RAWMTKLLTEAGLVDVYRQLQPTATDEAYTWWSNRGQAYAKNVGWRLDYHLATPAMAALA 238

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             E+             + ++ SDH P++I+YD+
Sbjct: 239 RSETI-----------YKAEKFSDHAPLTIEYDW 261


>gi|315047122|ref|XP_003172936.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Arthroderma gypseum
           CBS 118893]
 gi|311343322|gb|EFR02525.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Arthroderma gypseum
           CBS 118893]
          Length = 604

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/340 (11%), Positives = 75/340 (22%), Gaps = 79/340 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +RL +WN+N +        W     R    +  +    +   ADIV  QE  +   +   
Sbjct: 3   LRLTTWNVNGIRNPFSYEPW-----RGNRTFGAMFDILE---ADIVVFQEAKIQRKDLQD 54

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +     W  ++S   +   +S            A+R +         P          A
Sbjct: 55  DMVLVPGWDCYFSLPRQKKGYSGVVIYTRSSKCAAIRAEEGITGTLCPPNSSTPFRQLTA 114

Query: 141 -----------GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQ 187
                            E+       +   L +   +F  +                   
Sbjct: 115 SEQIGGYPSVEQMEELSEVDPTTLDSEGRCLIVEFPAFVLIGVYCPANRDESRDGFRLGF 174

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGNNDDFW 225
              L+  +    +     ++ GD N                                 F 
Sbjct: 175 LSLLEARVRNLIKMGKRVILTGDLNISPAAIDSAPATERIKKNTETEEEYVSSPARRLFN 234

Query: 226 KTIDPNDSL-------------IRFPKEKDSRCNANKNL---------RNKIPIDYFVMD 263
             +    S                  +   +R                     IDY +  
Sbjct: 235 GLVRRVGSTEETHDIEASPVLRDLCREFHPNRTGMYTCWEQRVNARPGNYGSRIDYILCS 294

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +   + ++ +              G   SDHCP+     
Sbjct: 295 DDIRPWFVESNIQ-----------EGLMGSDHCPVYASIS 323


>gi|289706866|ref|ZP_06503207.1| endonuclease/exonuclease/phosphatase family protein [Micrococcus
           luteus SK58]
 gi|289556416|gb|EFD49766.1| endonuclease/exonuclease/phosphatase family protein [Micrococcus
           luteus SK58]
          Length = 925

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 45/352 (12%), Positives = 86/352 (24%), Gaps = 75/352 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS---------------------- 52
               +V   V + S+N+       G  +   S  R  +                      
Sbjct: 500 AAPEAVGGNVTVGSFNVLNYFTTLGQDVAGCSAYRDRAGTPVTTNGCLPRGAYTPEAFAR 559

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYN---------------AVAKVFPKNTWCIFYSTER 97
               +      L   +V L+E+ +                 A+     +  W    S   
Sbjct: 560 QQEKIAAAINGLGTSVVALEEIENSEKFGLDRDHALAHLVEALNAQAGEQRWAFVASPAE 619

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN-----RRAVELLVEI 152
               +  D    I +A   +   V  + +S  L    +  +         R A       
Sbjct: 620 RPALADEDV---IRSAFIYQPAEVTPVGESVILDDQTNFDNAREPMAQLFRAADGTSEGA 676

Query: 153 NGKKIWVLDIHLKSFCFLDSLENT------YSPSCSLLSQQAQWLKDWITQKKESL--VP 204
            G +   +  H KS     +               +    QA+ L  +  + K       
Sbjct: 677 AGTEFVAITNHFKSKGGSGATGGNVDSGDGQGAYNADRVGQAEALVAFAERMKAETGTDR 736

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GDFN             + ++         +   +   +         +D      
Sbjct: 737 VLLMGDFNAYEKEDPI-----RVLEAAGY---VSQGALTGEYSYAFGGAVGSLDGIYASP 788

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGK--------------RLSDHCPISIDY 302
           +A   +  +    I  NE       +              R SDH PI +  
Sbjct: 789 SAAAAITGQDIWMINANESVALEYSRHNYVAEDLYSADQWRSSDHNPILVGL 840


>gi|256783093|ref|ZP_05521524.1| hypothetical protein SlivT_01240 [Streptomyces lividans TK24]
          Length = 288

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 73/285 (25%), Gaps = 61/285 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--- 81
           R+++WN+                    S+              ++ +QE  + +      
Sbjct: 57  RVMTWNLCN--------------PCDASNLDRAAD-IAAHAPQVIGMQEACARDVDRIRD 101

Query: 82  --KVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             + F    + + + S  +  +       N      A+          +           
Sbjct: 102 YLEAFHGLVYHVAHGSVLQNWSRCGGAPWNPGGFGQAILSAAPITDAVNVEYPDGG---- 157

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            + +R  + +  E+ G+ + V + HL                    + Q + L   + + 
Sbjct: 158 -SEDRGYLAVTTEVGGRSVRVFNTHL-----------AQRRQEEFRTDQVRVLAKEVARH 205

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           + +    ++ GDFN         D  W      D            C    + +     D
Sbjct: 206 ERA----IVVGDFNAVP-EASELDPMWSLATDTDPQCHPAPG--GTCEPTTDWQ--SKFD 256

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y  +       +       +              SDH  +  D D
Sbjct: 257 YVFLRG-----VAPREHRVVRTAH----------SDHDLLYADLD 286


>gi|164426814|ref|XP_961458.2| hypothetical protein NCU03682 [Neurospora crassa OR74A]
 gi|157071489|gb|EAA32222.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 289

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 77/296 (26%), Gaps = 21/296 (7%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   S    VR VS+NI   +    V   +   +R       L       D+  + LQE+
Sbjct: 7   PAPGSAQLHVRFVSFNIR-FATDNPVPGEQPWTERRPRLCAQLNFLTSGHDSTFLCLQEV 65

Query: 75  GSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                +  +     +W            +   S           +          P    
Sbjct: 66  LYSQLLDIQDSLGPSWSHIGRGREDGKLAGEFSPIFFRVDEWDCEDWKTYWLSETPERP- 124

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
              +     R               V+ +      F    +     S  L+   A    +
Sbjct: 125 SIGWDAVLERIVTVGSFRHKTTSKAVIVMSTH---FDHRGQIAREESSKLILMLA---SE 178

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           W     +S  P V+ GD N                   D+   FP E             
Sbjct: 179 WRRTHGDSYPPLVLGGDLNSTPTDQAYKTLTSSDSGLQDTSAVFPDELKYGNRDITYTSF 238

Query: 254 KIP------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             P      ID+  +       LI   F  +    DD    G  LSDH PI +D +
Sbjct: 239 GEPDEEPKTIDFLFV--QRPPTLILRLFGILPNKFDD----GVFLSDHRPIFVDME 288


>gi|15646134|ref|NP_208316.1| exodeoxyribonuclease III [Helicobacter pylori 26695]
 gi|2314703|gb|AAD08563.1| exodeoxyribonuclease (lexA) [Helicobacter pylori 26695]
          Length = 250

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                     + +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|71737405|ref|YP_272561.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257481811|ref|ZP_05635852.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289627987|ref|ZP_06460941.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289646455|ref|ZP_06477798.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298485207|ref|ZP_07003300.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71557958|gb|AAZ37169.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298160195|gb|EFI01223.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320322199|gb|EFW78295.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331850|gb|EFW87788.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330866580|gb|EGH01289.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330872976|gb|EGH07125.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330986813|gb|EGH84916.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331009446|gb|EGH89502.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 291

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 81/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      +    +     +          +   +       D D+V L
Sbjct: 30  PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLIN--DFDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFVNQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           ++D I          V+ GD N   N L  +            +               +
Sbjct: 188 IRDLIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271


>gi|260062521|ref|YP_003195601.1| exonuclease III [Robiginitalea biformata HTCC2501]
 gi|88784086|gb|EAR15256.1| exonuclease III [Robiginitalea biformata HTCC2501]
          Length = 254

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 78/304 (25%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N +    G                    + ++LD D++ LQE+ +   + + 
Sbjct: 1   MKIISWNVNGIRAISGKGF---------------AGHIEDLDPDVLCLQEIKADTEIVEE 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                                      ++  A+  KN        P         R    
Sbjct: 46  IAGQLPGYAVHVHPAEK--------KGYSGTALLLKNAEAGVDRGPETDLLQGEGRI--- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +     +++ ++ +        +      +   +    L+D          
Sbjct: 95  ------LRADLGDFNLVNTYVPNSGANLKRLDFREEWDAAFLEYLNGLRDH--------K 140

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI---------------RFPKEKDSRCNAN 248
           P V+ GD N     +   +D                              +++     A 
Sbjct: 141 PLVLCGDLNVAHRPIDLKNDKANYNKTAGYTQREIDGMDRLHQSGLIDIFRKRHPDEVAY 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYF++       +                      SDHCPI 
Sbjct: 201 TYWSYRFGARKRNVGWRLDYFLISPELEGRVAGTPIYH-----------NIEGSDHCPIG 249

Query: 300 IDYD 303
           ++ D
Sbjct: 250 LELD 253


>gi|88704257|ref|ZP_01101971.1| conserved hypothetical protein, secreted [Congregibacter litoralis
           KT71]
 gi|88701308|gb|EAQ98413.1| conserved hypothetical protein, secreted [Congregibacter litoralis
           KT71]
          Length = 400

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/385 (11%), Positives = 98/385 (25%), Gaps = 86/385 (22%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNI--NTLS------EQEGVSLWKNSVKRTTSDYTL 56
           +++  V  +     S A+ +R+ ++N+     +         G  L              
Sbjct: 13  FLILGVLLMPAGAHSEARVLRVATFNVSMEGGNYVGKGVTPSGHELPAALSNSEHPQIKN 72

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKN---------------TWCIFYSTERLIN- 100
           + +  + +  D++ L E   +    +                     +  +Y        
Sbjct: 73  IAEIIQRIRPDVLLLNEFDYHADPERGVKPFIERYLQQSQTDVEAIDYPYYYQGPVNTGV 132

Query: 101 -------HSKRDSNND----------IHTAIAVRKKNVR--------------------- 122
                       S                 + +  +                        
Sbjct: 133 DSGMDLDRDGEASGTGNDAFGYGLYPGQYGMLLLSRYPIDFEAIRSFQLFKWKDMPDNLM 192

Query: 123 ----VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                         A     R  ++   ++ V ING  + VL  H     F    +    
Sbjct: 193 TDMRTETNELWYPEAVQKVLRLSSKSHWDVPVRINGNVLHVLASHPTPPVFDGPEDRNGR 252

Query: 179 PSCSLLSQQAQWL-----KDWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFWKTI 228
            +   +     ++      D+I   ++         FVI GD N  +       +    +
Sbjct: 253 RNHDEIRFWVDYIEGGEQADYIYDDRDQPGGLKDERFVILGDLNASMEEGDARREGITAL 312

Query: 229 DPNDSLIR---------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
             +D + R              DSR +        I  DY +  +  ++ +    F    
Sbjct: 313 LGHDKVRRGLLPTSDGGRANNADSRFSPTHTASWGIRADYVIPSKKGWRVIDAGVFWPAP 372

Query: 280 YNEDDIKSRGKRL-SDHCPISIDYD 303
            +      + +R  SDH  + +D +
Sbjct: 373 GDPLRRLVKNRRASSDHRLVWMDLE 397


>gi|317478347|ref|ZP_07937511.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|316905506|gb|EFV27296.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 366

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 64/301 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++L+S+NI                         +  Y K   ADI+ LQE  +  +   
Sbjct: 101 SIKLLSYNIMGFDGAAKQDGKNP-----------ILTYLKESGADILCLQEYSTVQSSKH 149

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  K+      +      ++   S       IA   K   +  +                
Sbjct: 150 LSQKDVERELKAYPYHRINT-VGSGKGHTNKIACYSKFPILSSRILDYPS--------EY 200

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYSP 179
             +V   ++I    + +++ HL+S     +                            + 
Sbjct: 201 NGSVLYEIKIGEDTVTLINNHLESNKLTKADKVVYEDMLKSPEKEKVKSGARLLIRKLAE 260

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           + ++ + QA  +   I          ++ GDFN        +    + +D       F +
Sbjct: 261 ASAIRAPQADTIAHEI--TASPHPYIIVCGDFNDTPISYT-HRTIAQDLDD-----AFTQ 312

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  +    R    ID  +  +N   +             +    R  + SDH PI 
Sbjct: 313 SGRGLGISYNQNRFYFRIDNILTSKNLRAY-------------NCTVDRSIKESDHYPIW 359

Query: 300 I 300
            
Sbjct: 360 C 360


>gi|308185296|ref|YP_003929429.1| exodeoxyribonuclease III [Helicobacter pylori SJM180]
 gi|308061216|gb|ADO03112.1| exodeoxyribonuclease III [Helicobacter pylori SJM180]
          Length = 250

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGIDIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                     + +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|288927425|ref|ZP_06421272.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288330259|gb|EFC68843.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 344

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/348 (12%), Positives = 100/348 (28%), Gaps = 64/348 (18%)

Query: 6   VLALVFFLVPCTASVAQK-VRL---VSWNINTLSEQEGVSLWKN-----------SVKRT 50
           +LAL   LV   ++ AQK   +     +N   L +       ++           +  + 
Sbjct: 1   MLALSALLVVVLSAAAQKKFEVYAAGFYNQENLFDTCHDEGKRDYEFLPSGSYKWNGMKY 60

Query: 51  TSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102
           T     + +   ++  D+        + L E+ +   +  +  +       +      H 
Sbjct: 61  THKLHNMARALADMGTDVLPGVGCAVIGLAEVENAKVLTDLTAQPE---LAARGYKFCHI 117

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           +      I  A+        V      P + + +  S    R  + +   + G+ + V+ 
Sbjct: 118 EGPDRRGIDCALLYNPALFAVRNVKLVPYVQSLEKDSAFYTRGFLTVSGTLAGEHVTVVV 177

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            HL S           +        Q   ++D + Q+++     ++ GD N        +
Sbjct: 178 CHLPSRFSDSFYREQGAR-------QILAIRDSV-QREDKDCKVLVMGDMNDDPMDKSIS 229

Query: 222 DDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                  +       +     +           +   +    D  ++ +N       + F
Sbjct: 230 QGLHGKANMSEVGQGDMYNPWYNVLTKEGVGTLQFQGSWNLFDQILLSKNLLNANGSKDF 289

Query: 276 SEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
           + + Y ++ I  R                           SDH P+ +
Sbjct: 290 TALKYWKNQIFKRDYLFQTEGKYKGTPKRTTAGGVWLDGFSDHLPVVV 337


>gi|297170635|gb|ADI21660.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0130_09F11]
 gi|297171574|gb|ADI22571.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0500_10F10]
          Length = 248

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 78/280 (27%), Gaps = 52/280 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ S+NI            K+           +      LDADIV LQE+       ++
Sbjct: 2   FRVASYNIR-----------KSVGTDWRRRPKQILDVLTELDADIVALQEV-DRRLGDRL 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +   I   T            +       +  +    L +   L+           R
Sbjct: 50  SSLSPSLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLV-----LPALEPR 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    ++I   KI V+ +HL                     +QA+ + D +    E  +
Sbjct: 105 GAALADLQIGDLKIRVVGMHLGLVGLW-------------RKRQARAVLDQLAS-LEEPL 150

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+ GD N+           W T     +         +   +  +    +  D  +  
Sbjct: 151 PTVMMGDLNQ-----------WNTEGGCLAHFAEDHHVIAPGLSFHSQMPFVSFDRIITS 199

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + +                    R +  SDH P+  D  
Sbjct: 200 LDIHVDAAAV----------HSSERARLASDHLPVWADLS 229


>gi|317482487|ref|ZP_07941503.1| exodeoxyribonuclease III [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916039|gb|EFV37445.1| exodeoxyribonuclease III [Bifidobacterium sp. 12_1_47BFAA]
          Length = 286

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 80/311 (25%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81
            + + + N+N +                 +    +  +A     D+  +QE+ +    V 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCIQEVRAPQDDVD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +    + +     +               + +      + ++      ++D  
Sbjct: 47  SIFDEFGFEYATAGKIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLAKRYGLPGLSEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  + V  +++ +    D            L    + +     +
Sbjct: 107 S---GRWIETDVKTPEGYTVTVASVYVHAGNTDD--PTKMEQKYRFLDTMLKRMGALRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +D  + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +       +   +  D   +  KR 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDKRW 274

Query: 293 SDHCPISIDYD 303
           SDH P++I Y+
Sbjct: 275 SDHAPLTITYE 285


>gi|295133317|ref|YP_003583993.1| endonuclease/Exonuclease/phosphatase family protein [Zunongwangia
           profunda SM-A87]
 gi|294981332|gb|ADF51797.1| endonuclease/Exonuclease/phosphatase family protein [Zunongwangia
           profunda SM-A87]
          Length = 349

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/327 (11%), Positives = 94/327 (28%), Gaps = 68/327 (20%)

Query: 1   MIRKYVLALVFFLVPCTASVA------------QKVRLVSWNINTLSEQEGVSLWKNSVK 48
           M R+ +L+L+  +V    +               +  ++++N+   ++            
Sbjct: 64  MKRQMILSLLIMIVGFGFASKFYRWPFSDDNTRGEYSIMNYNVRMFNKSNWTDEKNIP-- 121

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                   +    K  D DI+ ++E      + K              +      +  ++
Sbjct: 122 ------EKINDIIKEADPDILTIEEYYKNEYLEK--------------KYPYKFIKYRSD 161

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
                 A+  K   + ++S        +        A+   + I    I + +IH +S  
Sbjct: 162 KSSFGQAIFSKFPLLAKRSLDFHVDNFTGDN---NNAIFTDIIIKKDTIRLYNIHFQSLQ 218

Query: 169 FLDSLENTYSPSCSL------------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
             + ++   +                   +Q    +        S  P +I+GDFN    
Sbjct: 219 VTEDVQEVDNFKNKQESKKVIKNISSGFVRQQNQSERVKRSIDSSEYPVIISGDFNNTAF 278

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
               N      +  +     F K+     +        + ID+ ++              
Sbjct: 279 SYTYNQ-----VRNDRFQDAFVKKGAGFSSTYNLNYFPLRIDFHLL-------------- 319

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
           + ++  +  +      SDH PI   + 
Sbjct: 320 DTVFEINSYERIKVPYSDHYPILTTFS 346


>gi|92115724|ref|YP_575453.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14]
 gi|91798618|gb|ABE60993.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14]
          Length = 293

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 77/309 (24%), Gaps = 64/309 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + ++ L +WN+N                       L+ ++ K    D++ LQE       
Sbjct: 22  SMQITLTTWNVN----------------SVRLRIDLVAKFLKAQRPDVLCLQETKCP--- 62

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              FP   +       RL       +    +  +AV  K               DS    
Sbjct: 63  DDAFPLKRFR------RLGYEHVALNGQKGYHGVAVVSKLPFDASNIRTFCDKIDSRHVG 116

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   L       + + + ++ +    D  +   +P  +   Q    +K        
Sbjct: 117 VTLGGEAGLA----APLVLHNFYVPAG--GDIPDPALNPKFAHKLQFLDEMKACTPLHPR 170

Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTIDP--------------NDSLIRFPKEKDSR 244
                V+ GD N   +     ++    K +                 + +          
Sbjct: 171 DGDRHVLVGDLNVAPHEHDVWSHKQLLKIVSHTPVECEKLLGLQSHGNWVDIARARIPMS 230

Query: 245 CNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+  + +     +         +         +R SD
Sbjct: 231 EKVYTWWSYRAADWVAANRGRRLDHIWVSEALRGGIRD-------FRITRAARGWERPSD 283

Query: 295 HCPISIDYD 303
           H P++   +
Sbjct: 284 HVPVTAVIE 292


>gi|50926167|gb|AAH79505.1| Zgc:101000 [Danio rerio]
          Length = 270

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 82/287 (28%), Gaps = 35/287 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82
           +++ S+N+    +         S     +    L +       DI+ + E+      A  
Sbjct: 1   MKVASFNVQKFGK---------SKLSDPAVLQTLIKIVSRY--DIIVILEVVDSKGRAMD 49

Query: 83  --VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +   N +         ++      N         R+  V +   SY     +     A
Sbjct: 50  NFLKELNKFDKKAHYTMELSTRLGRGNYKEQFMFLYREDVVEL-VGSYQYKDDQPGDEDA 108

Query: 141 GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             R    L  +      + + ++ +H K    +  ++  Y     +  +           
Sbjct: 109 FAREPYILRFKCPNAVLEDLVLMPVHTKPEDSVKEIDELYDVFQDVRKKW---------- 158

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   +I GDFN   +Y+ +       I  +        + +    +  N      I
Sbjct: 159 ---KTDNIMILGDFNADGSYVSDKKMKQIRIRSDPEFHWLISDDEDTTASTHNDNTYDRI 215

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302
              +   +  + ++  S     +            ++SDH P+ ++ 
Sbjct: 216 --VIYGDDMMQAVVPGSAKPFNFQTAFSLTEEDALKVSDHYPVEVEL 260


>gi|329120913|ref|ZP_08249545.1| exodeoxyribonuclease III [Dialister micraerophilus DSM 19965]
 gi|327471372|gb|EGF16823.1| exodeoxyribonuclease III [Dialister micraerophilus DSM 19965]
          Length = 254

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 81/308 (26%), Gaps = 82/308 (26%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +SWN+N L          +                KNL+AD   LQE        
Sbjct: 2   NNLKYISWNVNGLRACIKKGFLDS---------------FKNLNADCFCLQETKLQPHQI 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  + S                ++  A+  K   +                  
Sbjct: 47  ELDIPGYYQYWNSAI-----------KKGYSGTALFTKIKPISVS--------------- 80

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE- 200
                 + +E + ++  ++    K+   +           + L  + +W  D+     + 
Sbjct: 81  ----YGMNIEEHDQEGRLITAEFKNHFLVVCYTPNSQRQLARLEYRMKWENDFKNYLLKL 136

Query: 201 -SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244
               P ++ GD N                      +    + T+  N     F      +
Sbjct: 137 TESKPVILCGDLNVAHKEIDLANPSSNHKNAGFTDDERKKFSTLLENGFTDTFRYLYPDK 196

Query: 245 CNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +A                  IDYF++       +                    + SDH
Sbjct: 197 KDAYSWWSYFAKSRERNIGWRIDYFLVSDKLKNKIKDAKIH-----------PEIQGSDH 245

Query: 296 CPISIDYD 303
           CP+ + +D
Sbjct: 246 CPVELTFD 253


>gi|328767146|gb|EGF77197.1| hypothetical protein BATDEDRAFT_20862 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 394

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 84/304 (27%), Gaps = 74/304 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + ++WN+  L                      + +Y +  DAD+V LQE     ++    
Sbjct: 116 KFIAWNVAGLRASLKKD---------------MMRYIEAEDADVVCLQETKMNASLDTSM 160

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                  F   +    +    +    ++ + V  K   +  +      A D   R     
Sbjct: 161 -------FSRKQYPHQYWSHCTTKKGYSGVMVLSKVKPLSVEYKMGHSAIDDEGRF---- 209

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V +  +  + +  ++ +        +        L +    L+        S  P
Sbjct: 210 -----VILEYQDFYYIGCYIMNAGADLGRLDLKREHYVKLKKFMGELQ--------SKKP 256

Query: 205 FVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            + +GD N                         +DF   +   D +  F  +  +     
Sbjct: 257 VIWSGDLNVAHTEIDLARPATNTKSAGFTPEEREDFGNLLTDLDMVDSFRLKHPTATGMY 316

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DYFV+ +     +I+      +Y            SDH PI 
Sbjct: 317 SYYSFRHNSRANNVGWRLDYFVVSKALQDDIIEADIRSEIY----------GASDHVPIL 366

Query: 300 IDYD 303
           +  +
Sbjct: 367 LLLN 370


>gi|327265943|ref|XP_003217767.1| PREDICTED: deoxyribonuclease gamma-like [Anolis carolinensis]
          Length = 305

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 87/305 (28%), Gaps = 36/305 (11%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            +   +F L    A+++  +R+ S+N+ +  E         + +       ++ +     
Sbjct: 1   MLCISLFLLFAFHAALS--LRICSFNVRSFGE---------AKRTRPEIMNVIVKIISRC 49

Query: 65  DADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
             DI+ L E+          +  K           + +      +     A   R + V 
Sbjct: 50  --DIMLLMEIKDNRNRICPFLLEKLNGHSQKQYRYVASGRLGRKSYKEQYAFFYRPEIVS 107

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSP 179
           V +Q+Y     +     A +R    +    +    ++  ++ +H      +  ++  Y  
Sbjct: 108 V-KQTYQYPDLQPGNEDALSREPFVVWFSSSNTVAREFVIIPLHTTPEMAVQEIDELYDV 166

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              +                     F+  GDFN    Y+         +  ++  I    
Sbjct: 167 YQDIKQHW-------------KSENFIFMGDFNAGCGYVARRHWKDIRLRNHNEFIWLID 213

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCP 297
           ++               I   +         +  S +   +      +  + L  SDH P
Sbjct: 214 DQTDTTVKASTHCPYDRI--VLHGDKLINAAVPNSANIFDFQGVFAMTEAQALAVSDHFP 271

Query: 298 ISIDY 302
           +    
Sbjct: 272 VEFQL 276


>gi|313114917|ref|ZP_07800415.1| exodeoxyribonuclease III [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622794|gb|EFQ06251.1| exodeoxyribonuclease III [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 250

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 79/303 (26%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +    LDADI  +QE       A  
Sbjct: 1   MKLISWNVNGLRACLTHGF---------------AESFAALDADIFSVQETKMQPGQADF 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P       YS E              ++  A   +   +   +   +   D   R    
Sbjct: 46  APDGYTEYTYSAE-----------KKGYSGTACWCREQPLSVTTGIGIEQHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L +E  G   W+++ +  +        +               L        ++  
Sbjct: 91  ---VLTLEYPG--FWLVNCYTPNSQDGLKRLDYRMEWEDAFRAYLLAL--------DAKK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P ++ GD N     +   +D    +                +       +          
Sbjct: 138 PVILCGDLNVAHREIDIKNDKTNHMSAGFTDQERGKMTELLDAGFADSFRVLHPDEVKYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++ +     +        ++            SDHCP+ +
Sbjct: 198 WWSYRFHAREKNAGWRIDYFIVSRRIADKIRAAEIHNEIF-----------GSDHCPVEL 246

Query: 301 DYD 303
           D D
Sbjct: 247 DID 249


>gi|149907902|ref|ZP_01896570.1| putative phospholipase C precursor [Moritella sp. PE36]
 gi|149808908|gb|EDM68839.1| putative phospholipase C precursor [Moritella sp. PE36]
          Length = 428

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 83/279 (29%), Gaps = 27/279 (9%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             +  L+S+NI         +      K+  S  T +         D++ L E+      
Sbjct: 163 GNEFSLLSYNIW--------ATTIFGSKKVDSRLTEMPAVMSGY--DVLVLTEVFDPIRT 212

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +K+  + +    +++  +    K      + +   +        ++S            A
Sbjct: 213 SKLLKQLSKEYSFTSSEMFKLGKI-----MQSGTRILTPWPVEAEKSLKYTNCSGIQCAA 267

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKK 199
             R  +   +   G    V   H +S     +         +    Q + + ++I  Q  
Sbjct: 268 -TRGVIYTRINKQGYIYHVFATHTQSSDDDTNR--------TARLAQLEEMGEFIREQNI 318

Query: 200 ESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEK-DSRCNANKNLRNKIPI 257
            +    ++AGDFN   I   G+ D     ++  +   +      DS  N          +
Sbjct: 319 PADEAVILAGDFNVNKIGLPGDRDQMAYILNATEPENKGHNLSFDSNTNNWAEKPYLEYL 378

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           DY +   +  + +                     LSDH 
Sbjct: 379 DYTLTGNDNLQPISASQEIFAPRVLTKSLWGNWDLSDHY 417


>gi|103488148|ref|YP_617709.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256]
 gi|98978225|gb|ABF54376.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256]
          Length = 264

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/308 (10%), Positives = 83/308 (26%), Gaps = 76/308 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
            + SWNIN                   +   ++ ++ +    DI+ LQE  +        
Sbjct: 5   SIASWNIN----------------SVRARIGIVEKFLREEAPDILCLQETKVECGLFPKA 48

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F    +    +               +H  +A+  +      + Y      ++      
Sbjct: 49  MFEALGYGHIVT-----------HGQRMHHGVAIVSRLPLAEVRKYDWQANGEARH---- 93

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + + +      + + ++++ +    D  +   +P           + DW      + 
Sbjct: 94  ---IGVTLPSG---VRLDNVYIPAG--GDIPDREINPKFGQKLDFLARMTDW--SGGLNG 143

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            P V+ GDFN                   +     +   +    +D +        +   
Sbjct: 144 TPTVLTGDFNVAPLASDVWNHKALLDVVSHTPIEVETLARLQAASDWVDLGRHFIAAPAP 203

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+  +  +     +     +            +R SDH 
Sbjct: 204 LYTWWSYRAKDWEASNRGRRLDHMWVTPDLKDKAVAHRIVQ-------PARSWERPSDHV 256

Query: 297 PISIDYDF 304
           P+  ++ F
Sbjct: 257 PLITEFAF 264


>gi|313158592|gb|EFR57986.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 320

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 83/310 (26%), Gaps = 44/310 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---Y 77
              +RL+ WNI      +  +            Y     + K  D D+    E  S    
Sbjct: 26  TDDMRLLYWNIQNGMWSDQSNG-----------YDNFVAWVKGYDPDVCVWCEAQSIYKS 74

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +V   + +      E    +  +      H     R    +V+   YP+   +   
Sbjct: 75  GTAERVDSVDRYLTANWGELAARYGHKYWYVGGH-----RDNFPQVVTSKYPIENVRRIV 129

Query: 138 SRAG----NRRAVELLVEINGKKIWVLDIH-----LKSFCFLDSLENTYSPSCSLLSQQA 188
            +A     +  A    +  NG+ + ++ +H                            + 
Sbjct: 130 GQAPDSIVSHGAGWARIVKNGRPVNIVTLHTWPQAYAFQAVDRDASKAEHGGDRYRRMEI 189

Query: 189 QWLKDW-ITQKKESLVPF-VIAGDFNRK---------INYLGNNDDFWKTIDPNDSLIRF 237
           +++    I  + ++     ++ GDFN +                      I  +   +  
Sbjct: 190 EYICSHTIATQSDAGQQLWMMMGDFNSRSRLDNRIYNYPDDDTRLLVHDYIAEHTPYVDV 249

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLS 293
             EK               ID+        + + +       + E              S
Sbjct: 250 IAEKHPGEFHTTTHGQ-SRIDFVYCTPPLCERITRAEVIADDFTEPVRDPGKLSNFYHPS 308

Query: 294 DHCPISIDYD 303
           DH PI +D+D
Sbjct: 309 DHRPILVDFD 318


>gi|313204342|ref|YP_004042999.1| exodeoxyribonuclease iii xth [Paludibacter propionicigenes WB4]
 gi|312443658|gb|ADQ80014.1| exodeoxyribonuclease III Xth [Paludibacter propionicigenes WB4]
          Length = 253

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 91/306 (29%), Gaps = 79/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+N+N +      +                +++ +  + D++ LQE          
Sbjct: 1   MKIISYNVNGIRAALSKNF---------------QEWLQAENPDVLCLQETKAQPDQVDT 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F +  +  +  +     +          + +A+  K          ++G  +    A 
Sbjct: 46  MLFAEMGYTSYLHSAEKKGY----------SGVAILSK----QAPDRVVVGMNNPVFDAE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     ++  +   + ++ +++ S    D  +       +        L+        +
Sbjct: 92  GR-----VIRADFGDLSIVCVYIPSGSSGDERQAFKMQFLAAFGPFILELRK-------T 139

Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               V+ GD+N                   +L     +    + +  +  F     S   
Sbjct: 140 RPNLVVCGDYNICHKPIDINHPERQNGVSGFLPEERAWLDQFELDGMVDSFRVFDKSAEK 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY  + ++ +  L   +      +           SDHCP
Sbjct: 200 -YSWWSYRGGARFRNVGWRIDYHWVTESLHTRLKSAAILTDAVH-----------SDHCP 247

Query: 298 ISIDYD 303
           ++++ +
Sbjct: 248 VAVELN 253


>gi|228469711|ref|ZP_04054679.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas
           uenonis 60-3]
 gi|228308730|gb|EEK17456.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas
           uenonis 60-3]
          Length = 352

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/341 (11%), Positives = 81/341 (23%), Gaps = 55/341 (16%)

Query: 6   VLALVF-FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDY 54
           +L+L F  +    ++  Q+V +  +N+  L +                   + +R     
Sbjct: 12  LLSLSFGVIYAQHSAAPQRVTVAFYNLENLFDTINQENNDEEFLPEGANRWTPERYQHKL 71

Query: 55  TLLRQYAKNLD---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             +      +      I+ + E+ +   +  +               I H        I 
Sbjct: 72  RNMSHVISLIGGNGPAIIGVAEIENRGVLEDLIA---QESLRDKHYNIVHYDSPDLRGID 128

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
            AI  +    +V       +   +       R  V     I+G+ + VL  H  S    +
Sbjct: 129 CAILYQPDVYKVFASGARAVVIPNEPWIK-TRDVVYASGLIDGEIVHVLVGHWPSRSGGE 187

Query: 172 SLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----- 225
           ++  N    +   +   A  L              ++ GDFN         D        
Sbjct: 188 AVSLNRRMAAAKTMRSVADSL-----YTLFPGSKVIMMGDFNDDPISPSVRDGLGIQKSP 242

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---------------- 269
             +  +D      +  +               D   ++                      
Sbjct: 243 DGLKASDYYTPMLQLYNKGMGTLAYRDVWNLFDIIAVNGELIGSNPTTWQLYRDPETTDM 302

Query: 270 ----------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                          +                 SDH P+ +
Sbjct: 303 GFIFKQPFMIQQSGQYKGYTLRTFVGGQWQGGYSDHFPVYV 343


>gi|294658206|ref|XP_460547.2| DEHA2F04158p [Debaryomyces hansenii CBS767]
 gi|202952957|emb|CAG88863.2| DEHA2F04158p [Debaryomyces hansenii]
          Length = 406

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 106/351 (30%), Gaps = 68/351 (19%)

Query: 16  CTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            + S  QK+ ++S+N+   + + +     L +  +  +   + L+    +  + DI+  Q
Sbjct: 61  PSTSKKQKISVMSFNLLSRHYMWKPVFGYLEQEYLSWSDYRFPLINLMIRQFNCDIMCFQ 120

Query: 73  EMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSY 128
           EM         +K FP   +  FY  +    +     + +I    I V      VL    
Sbjct: 121 EMEHLIYEKFWSKGFPSPNYHSFYVRKSEPVYWGDRPSENIDGVGIFVNGDKFDVLDSHA 180

Query: 129 PLLGAKDSFSRAG------------NRRAVELLVEI----NGKKIWVLDIHLKSFCFLDS 172
              G                      R  V LLV++    NGK ++V + HL      + 
Sbjct: 181 IHFGEYIMQHHVKFNVTKATVERVIPRNTVALLVKLRDKQNGKILYVTNTHLYWSPKFND 240

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------------- 217
           ++   +            L D+I          ++ GDFN   +                
Sbjct: 241 VKIIQTKLL------LNVLHDFIDHNCLCDPCIIMCGDFNSNPSSKVFQLLNTGTIDAFK 294

Query: 218 ----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-----------IP 256
                        N + +      +        +    +++ N R K             
Sbjct: 295 CNEFALHDYDHKANSELFHNGHIENPFHLACAYESLLTHSHINPRKKLEFTSFTKGLIDV 354

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDD---IKSRGKRLSDHCPISIDYDF 304
           +D+    +N +K        +  Y  +         +  SDH P+  +  +
Sbjct: 355 VDHIWYSKNHFKVTKLLGEVDQSYYTETGVVGFPNSQFPSDHIPLVTELAY 405


>gi|255013539|ref|ZP_05285665.1| exodeoxyribonuclease [Bacteroides sp. 2_1_7]
          Length = 253

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 83/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N N L    G  L                ++      D++ +QE  +      A
Sbjct: 1   MKIITYNTNGLRAAVGKGLP---------------EWLAQEQPDVLCIQETKLQPDQFPA 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  +  + +   +          + +A+  K        +   G         
Sbjct: 46  ETFEALGYKSYLFSAQKKGY----------SGVAILTKQEP----DHVEYGMGIERYDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++  S    D  ++             +  + ++ + ++S
Sbjct: 92  GRF-----IRADFGDLSVVSVYHPSGTSGDERQD-------FKMVWLEDFQKYVVELQKS 139

Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD+N                         +   + +             + + 
Sbjct: 140 RPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEEREWMTRFLSAGFIDTFRLLNPEKQE 199

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + R           IDY ++ +     +          +           SDHCP 
Sbjct: 200 YTWWSYRFNSRAKNKGWRIDYCMVSEAMKSRVKAAYILNDAVH-----------SDHCPA 248

Query: 299 SID 301
            ++
Sbjct: 249 VLE 251


>gi|237744646|ref|ZP_04575127.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp. 7_1]
 gi|229431875|gb|EEO42087.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp. 7_1]
          Length = 278

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 97/306 (31%), Gaps = 37/306 (12%)

Query: 1   MIRKYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           M +  +L+++F L    +  S+A +  + S+NI  L                  D     
Sbjct: 1   MKKGKLLSIIFALFFSLSILSLADEAYIASFNILRLGA-------------AKKDMVQTA 47

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVR 117
           +  +    DIV L E+ + + V ++  +         +  I+     S+    + A   +
Sbjct: 48  KILEGF--DIVGLVEVINRDGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYVYK 105

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           K  V+ ++        K S      R       +I       + +H              
Sbjct: 106 KDKVKFIKSEGFYKNGKSSL----LREPYGATFQIGNFDFTFVLVHTIYG--------NN 153

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                  + +   + ++   + E     +IAGDFN       +    +K  D     I  
Sbjct: 154 ESQRKAENYKMVDVYNYFQDRDEKENDILIAGDFNL-YALDESFRPLYKHADKITYAIDS 212

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +         N       D F   Q   +     S   + ++ D+ K   + +SDH P
Sbjct: 213 AIKTTIGVKGRANSY-----DNFFFSQKYSQEFTGSS-GALDFSGDNPKLMREIVSDHIP 266

Query: 298 ISIDYD 303
           + I  +
Sbjct: 267 VFIVVE 272


>gi|225558980|gb|EEH07263.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Ajellomyces capsulatus G186AR]
          Length = 675

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/358 (11%), Positives = 89/358 (24%), Gaps = 75/358 (20%)

Query: 22  QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +K   +S+N      +  +      +          L+    K  +ADIV LQE+   + 
Sbjct: 290 EKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 349

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++     +              K + + +         
Sbjct: 350 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 409

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++      ++G+++ V+++HL        ++   +  
Sbjct: 410 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 469

Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207
                 Q       I    +                                    P +I
Sbjct: 470 LMEEVTQLAEKYSKIPACTDKTAFRFSEPEHSTDGGGTATPVEPAPSVEYSSGSQIPLII 529

Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247
            GDFN                  ++       +  +        F  +            
Sbjct: 530 CGDFNSYPGSAVHELMSRGRLIEDHPDLEKRLYGNLSRVGMSYPFNLKSAYGAIGELDFT 589

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304
           N        IDY     NA +        +  Y +           SDH  +  ++ F
Sbjct: 590 NYTPDFADVIDYIWYTSNALQVTGLLGAVDKEYLQRVPGFPNYHFPSDHLALMAEFSF 647


>gi|171060370|ref|YP_001792719.1| endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6]
 gi|170777815|gb|ACB35954.1| Endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6]
          Length = 358

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 91/312 (29%), Gaps = 58/312 (18%)

Query: 6   VLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           ++A+    +           +R++++NI +    E               Y L+ +    
Sbjct: 85  LIAIPVMGLAHGTPQTGSGHLRVMTYNIKSYRADEKPGG-----------YALIAEEVLR 133

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            + D++ +Q+           P+    +F         +           +A   ++   
Sbjct: 134 HNPDVIVMQDANRLTDGHAPMPEAMKRVF---------APHQVYMRGQYVVA--SRHPLR 182

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL--------DSLEN 175
             +  PL  A+ +         V   V +  + + ++ +H  S                +
Sbjct: 183 GCRVNPLPEAEHNARY------VRCTVRVGTQAVDLVTVHFISPRDGLNAARHERLDGVD 236

Query: 176 TYSPSCSLLSQQAQWLKDWITQKK-----ESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
            +  + ++  +QA+ L   +T+           P ++AGD N   +           +  
Sbjct: 237 EWKQNFAVRLKQARQLVRDLTETPLLDSRGMAQPLIVAGDLNAPESSPVVQSLLALGLRD 296

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             S            +   N+   + ID+ ++                    +     G 
Sbjct: 297 AWSSAAIGYGYTHGHSLRPNIDL-LRIDHILVSPQVG--------------VERTFVGGT 341

Query: 291 RLSDHCPISIDY 302
             S+H P+  D 
Sbjct: 342 EGSEHRPVITDL 353


>gi|223647224|gb|ACN10370.1| Deoxyribonuclease gamma precursor [Salmo salar]
 gi|223673101|gb|ACN12732.1| Deoxyribonuclease gamma precursor [Salmo salar]
          Length = 316

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 86/303 (28%), Gaps = 34/303 (11%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            +L LV    PC++      ++ ++N+             ++          L +     
Sbjct: 7   LLLLLVGIFGPCSS-----FKICAFNVQNF---------DDAKSANFRVIHTLTRIVSRC 52

Query: 65  DADIVFLQEMGSYNA---VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
             DI  LQE+         A V   N +  ++          R   +        R + V
Sbjct: 53  --DICLLQEVKDTQGNATKALVEALNRYDAYHYKSVASGVLGRTPQDQEQYVYLYRNETV 110

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            +  Q Y  +  K+  + A +R    +  +     I    +        D+++       
Sbjct: 111 ELTDQ-YQYVDRKEGNAAAFSRDPFVVRFQAKETVIGDFALIPLHTMASDAIKEIDKLYD 169

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                + +W          +    +  G FN    ++   D     +          ++ 
Sbjct: 170 VFEEIKMKW----------NTEAVMFLGAFNAGCGHMTRQDKANIRLFSIPGFFWLIRDX 219

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPIS 299
                 +        I   V  +   K +   S        +   S+ + L  SDH PI 
Sbjct: 220 VDTTVGDTASCAYDRI--VVHGERFLKAIKPYSAQVFNIANEYKLSKERVLEVSDHFPIE 277

Query: 300 IDY 302
           ++ 
Sbjct: 278 VEL 280


>gi|261362103|gb|ACX71485.1| sphingomyelinase [Bacillus mycoides]
          Length = 244

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 81/214 (37%), Gaps = 21/214 (9%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+   NA
Sbjct: 33  QNNTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYMK--NQDVVILNEVFDNNA 86

Query: 80  VAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
             ++           T         E         S+      +A+  K   V +  Y +
Sbjct: 87  SNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQY-V 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      N+  V   V+ N + + V+  HL++    D++    SP+ S+ ++Q Q 
Sbjct: 146 FEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQLQE 201

Query: 191 LKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223
           ++++I  +   +    +I GD N       NN D
Sbjct: 202 IQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSD 235


>gi|225077483|ref|ZP_03720682.1| hypothetical protein NEIFLAOT_02546 [Neisseria flavescens
           NRL30031/H210]
 gi|224951194|gb|EEG32403.1| hypothetical protein NEIFLAOT_02546 [Neisseria flavescens
           NRL30031/H210]
          Length = 259

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 78/307 (25%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           ++++S N+N +        +               +Y      DIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGVDIVCVQELKAQEADLSD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +    ++       +S     +                      +G         
Sbjct: 47  DMKNPHGMHGYWHCAEKRGYSGVAVYSKRKPDNV--------------QIGMGIEEFDRE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V  +  K+ V+ ++L S    +  +        +  +        +   K  
Sbjct: 93  GRF-----VRCDFGKLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNE 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246
               V+ GD+N     +   +      +                        +       
Sbjct: 141 GRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVP 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++        +                + ++ SDH P
Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           + ++YD+
Sbjct: 250 LVVEYDY 256


>gi|223938378|ref|ZP_03630272.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514]
 gi|223892947|gb|EEF59414.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514]
          Length = 254

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 82/284 (28%), Gaps = 37/284 (13%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +S+N+                         +++  K++  D++  QE             
Sbjct: 1   MSFNLRY--------ADLKKPHAWPDRRPAMQECIKSVSPDVMGTQEGLYGQIKDIASDL 52

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             +       R               +     +         P +    ++     R   
Sbjct: 53  PDYDWIGLG-RNGGSRSEFMAVFYRKSRLEPMEYDHFWLSDTPDVIGSSTWGNKNRRMVT 111

Query: 147 ELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +  +    GK+ +  + H     F   ++     S  L+ Q+ + L        ++ +P
Sbjct: 112 WVRFKDRQTGKEFYFFNTH-----FDHEVQKAREKSAELVRQRIEGL--------KTELP 158

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD---SRCNANKNLRNKI-PIDYF 260
            ++ GDFN             +     D+ +  P+ +       +           ID+ 
Sbjct: 159 VILGGDFNGGAGTNAAYKILMEGDFLKDTWVTAPQHRGNVVGTFHGYHKAVPNGPRIDWI 218

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +        +  E+   I +++      G+  SDH PI+   +F
Sbjct: 219 LTRGP----VTAEAAEVITFSKS-----GEMPSDHFPIATWLEF 253


>gi|306836965|ref|ZP_07469915.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49726]
 gi|304567148|gb|EFM42763.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49726]
          Length = 269

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/296 (10%), Positives = 75/296 (25%), Gaps = 51/296 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ +WNIN                   +            D D++ LQE  +       
Sbjct: 1   MRITTWNIN----------------SVRTRAQRALDLLHTHDIDVLCLQETKVKDDKFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    + +                 +    +A+  K       +        +     
Sbjct: 45  EAFEDAGYHV------------TCHGLNQWNGVAIISKEQPEEVFTGFPHQPGFAKDPEK 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDW 194
            +      +    + + +  +++ +   +      Y           +    Q++ L   
Sbjct: 93  PQDREARALGARIRGVEIWSLYIPNGREITDRHYDYKLDFLYQLSRYAAGHAQSKLLLTG 152

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251
                           F  K +        ++ ++         +  + +     +    
Sbjct: 153 DFNIAPRDEDVWDIEAFRGKTHVTEPERAAFQMLEEAGLEEVTRRFTEDQRYTYFDYKGM 212

Query: 252 ----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  + ID+ +      K              D  +  G++ SDHCP+  D+D
Sbjct: 213 RFHKNEGMRIDFQLASPPLAK-------HVTGARVDMEERAGEKTSDHCPLHADFD 261


>gi|301311968|ref|ZP_07217890.1| Ser/Thr protein phosphatase family protein [Bacteroides sp. 20_3]
 gi|300830070|gb|EFK60718.1| Ser/Thr protein phosphatase family protein [Bacteroides sp. 20_3]
          Length = 644

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 86/311 (27%), Gaps = 67/311 (21%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ----------KVRLVSWNINTLSEQEGVSLWKNSVKRT 50
           M R  V A   ++       AQ           +R++S+N+      + V          
Sbjct: 24  MKRSVVFAACLWVSCLFTLSAQKTTIESKEENSLRVMSYNVRNCRGMDEV---------- 73

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
             DY  +      +D D++ +QE+ S +  +            +      +         
Sbjct: 74  -VDYQRVADIMNRVDPDVIAVQELDSASVRSNGVFALKELADRTRMYY-TYGPSIDYQGG 131

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              I +  K   +     PL G      R   R  +        K+  +   H       
Sbjct: 132 KYGIGILSKEKPLSYWMLPLPG------REERRLLLVAEF----KEYVMCCSHFSL---- 177

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                           Q   +   +   K+   P  +AGD N        N    K +  
Sbjct: 178 ------------TKEDQVLSVPIILDALKDIRKPLFLAGDMNSIQGSPTQNALQEKFMPL 225

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           N+             N          ID+     N  ++ +     ++LY+E        
Sbjct: 226 NNYKD----------NTIPGQSPNRCIDFIYGFDNGNQYSVLR--RQVLYDEPI------ 267

Query: 291 RLSDHCPISID 301
             SDH P+ +D
Sbjct: 268 -ASDHLPLFVD 277


>gi|256831938|ref|YP_003160665.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603]
 gi|256685469|gb|ACV08362.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603]
          Length = 287

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + + N+N L       +                 +      DI+ +QE+ + + +   
Sbjct: 18  LTIATVNVNGLRAAWRKGMP---------------AWIDAAQPDIILMQEVRAPDDIVHG 62

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F  N W +               +      +A+  ++  +  +        +     G R
Sbjct: 63  FFSNGWSLVQQAC----------DIKGRAGVAIATRHDIIAARIGLGPQQPEIPVDTG-R 111

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +   +G+ + V+  ++ S        +      + ++ +   L            
Sbjct: 112 WVEADIALEHGRTLTVVSAYIHSGTAGTPKMDEKYSYLNRVTTRLAELN-------TPDS 164

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++AGD N         +                +                   +    
Sbjct: 165 LALVAGDINIAHTNNDIKNWRGNKKSAGFLPEERAYLDQWFDAGWHDTHRDLVGEQEGPY 224

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +     +               D   S   R SDH P+ 
Sbjct: 225 TWWSNRGQAFDNDSGWRIDYHLTTPELFT-------HASYPRVDRAPSYDTRWSDHAPLV 277

Query: 300 IDYD 303
           IDY 
Sbjct: 278 IDYS 281


>gi|255019624|ref|ZP_05291704.1| Endonuclease/exonuclease/phosphatase [Acidithiobacillus caldus ATCC
           51756]
 gi|254970927|gb|EET28409.1| Endonuclease/exonuclease/phosphatase [Acidithiobacillus caldus ATCC
           51756]
          Length = 269

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 82/302 (27%), Gaps = 60/302 (19%)

Query: 13  LVPCTASVAQKVRLVSWNI---------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           +   T    Q+  ++S NI           L       L  +       +   +    + 
Sbjct: 1   MPSPTEGHCQEFTVLSHNIQVGIGSRRSRHLVLHGWKYLLPHRHSLG--NLERIGMALRE 58

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVR 122
             ADIV L E  + +  ++   +  +    +          RD       +  +  +   
Sbjct: 59  --ADIVGLNEADAGSYRSQYVNQAAYLANKAGFPFWAQSRTRDWGELAQHSNGLLSRWPI 116

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           V      L G          R  +E  +++ G  + V+  HL                  
Sbjct: 117 VAVHRRVLPG------WMHGRGLLEATIDLAGHPLSVVVTHLALSRHG------------ 158

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              +Q + L +++  ++ +    V+ GD N                      +   ++ +
Sbjct: 159 -RFRQVEALAEYLVGRQAT----VVMGDLNCGARSPEL---------RLLLRLTGLRQAE 204

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +   +   D+ +   +                  D +   + LSDH  +    
Sbjct: 205 PPLATFPSWAPRFSFDHILCSPDL--------------EFLDWQRSTEPLSDHLAVLARL 250

Query: 303 DF 304
            +
Sbjct: 251 RW 252


>gi|104779394|ref|YP_605892.1| DNAse I-like hydrolase [Pseudomonas entomophila L48]
 gi|95108381|emb|CAK13075.1| putative DNAse I-like hydrolase [Pseudomonas entomophila L48]
          Length = 284

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 81/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +        + +   +       D D+V L
Sbjct: 28  PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHAGRSGNLQKIGDLLS--DFDLVAL 85

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE    +  +    +                  R+       +  V  +      + +PL
Sbjct: 86  QEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQQLEDHPL 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 146 PGPAG-------RGAILVRFGEGEDALIVVMMHLALG-------------AKTRARQLAY 185

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N               +  +  L               +
Sbjct: 186 IRELIGGY----RHQVLMGDMNTHATD----------LLDHSPLRDLGLIAPQVEATFPS 231

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++  +     ++     I              SDH P++++ 
Sbjct: 232 WRPQRCLDHILLSPSLTLERVEVLAQPI--------------SDHLPVAVEI 269


>gi|317181208|dbj|BAJ58994.1| exodeoxyribonuclease [Helicobacter pylori F32]
          Length = 250

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                     + +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|307195360|gb|EFN77278.1| 2',5'-phosphodiesterase 12 [Harpegnathos saltator]
          Length = 565

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 80/323 (24%), Gaps = 38/323 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEG-------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             +  R++S+NI   +  +                        L+ +     ++DI+ LQ
Sbjct: 241 SGKSFRIMSYNILADAYTDSVYSKDVLFPYCPEYALDIDYRKLLILKEIVGFNSDIICLQ 300

Query: 73  EMGSYNAVAKVFP---KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQ 126
           E+        + P      +   Y T+ +I+       N     +   +  V    V   
Sbjct: 301 EVDRKIYEQDLLPSLSMLYYDGIYVTKNVISEGLAMFFNHERFDMLNVESKVISHDVDSP 360

Query: 127 SYPLLGAKDSFSRAGNRR------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
            +  + +K    R   R          + +        +L +      F     +     
Sbjct: 361 KFKEVWSKIENDRVKERFLNRNTTVQVMSLRSKENPSKILVVGNTHLYFRPGACHIRLLQ 420

Query: 181 CSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNN------------DDFWKT 227
                     +   I ++     V  +++GDFN                     D     
Sbjct: 421 GYYAITYINEVAKAIREENPGCDVSVLLSGDFNSVPERGVYRLFTENYIPENCEDWRSNA 480

Query: 228 IDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYN 281
            +   ++      +      +    N        +DY            +    S+    
Sbjct: 481 EEEVANVSLTQDLRMSSACGTPEYTNYTPNFSACLDYIFYERDKFEVEQVIPMPSKEEIT 540

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                      SDH  +  D  F
Sbjct: 541 LHTGLPSIVFPSDHISLCADLKF 563


>gi|290559315|gb|EFD92650.1| exodeoxyribonuclease III [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 251

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 87/304 (28%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N L              ++      +++  ++     + +QE  +   +  +
Sbjct: 1   MKIMSWNVNGL--------------KSVIRKNEIQKELESDIYGAILIQETKTNEIIDTL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K+ +  + S           ++   ++ +    KN  +      + G K+       R
Sbjct: 47  -GKDYFKYYIS----------ATSKKGYSGVMTFSKNKPLNV----IYGIKNEQFDREGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  K  ++++ +  +     S  +        + +  Q L+           
Sbjct: 92  -----TLTLEFKDYFLINAYFPNSRRDLSRLDYKIKFNKSILKFMQALRR--------KK 138

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
           P +I GDFN   N +          +                   I   +  +       
Sbjct: 139 PVIIGGDFNVAHNEIDIARPKSNQGNAGFTSVERKFIDEMIKKGYIDTFRIFNKENGNYT 198

Query: 250 NLRN----------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDY  +     K +                 + K  SDH P+ 
Sbjct: 199 WWTYLYKSARTNNIGWRIDYLFVSNELKKRVKDAGII-----------KNKIGSDHAPVY 247

Query: 300 IDYD 303
           I+ +
Sbjct: 248 IELN 251


>gi|262196690|ref|YP_003267899.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
 gi|262080037|gb|ACY16006.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
          Length = 285

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 71/302 (23%), Gaps = 53/302 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79
           +R+V+ N+              +     +   L  +  + L  D+V LQE+         
Sbjct: 1   MRVVTLNLW------------GTTPPLATRLALAAEQLRALAVDVVALQEVRHAGDGRTT 48

Query: 80  ----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  +  ++ +                        +A+  ++     ++  L  A+ 
Sbjct: 49  AAHLAEALGFQHHYAAAVRWTAEDWPEDVPGAGAGEEGLAILSRHGLAECRALALPEARP 108

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +      R  +   ++    + WV   HL                     +Q   +   +
Sbjct: 109 T----EARILLSAAIDAPAGRCWVHTTHLHY----------ALDDGLARERQVLAIDHAL 154

Query: 196 TQKKESL--VPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                       ++ GDFN + +                          +    +     
Sbjct: 155 RACAAEEPAAVHILCGDFNAEPDSDEMRFLRGLCTLAGRRSYFQDAFAHRHPGEDGVTWC 214

Query: 252 RNKI------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             +              +DY  + +                     +S     SDH  + 
Sbjct: 215 TERGAARARRSMDRDRRLDYIYVSKRQRD---GRGTVREARVVLGGRSGEVAASDHYGVL 271

Query: 300 ID 301
            D
Sbjct: 272 AD 273


>gi|255580696|ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
 gi|223529240|gb|EEF31213.1| carbon catabolite repressor protein, putative [Ricinus communis]
          Length = 603

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 86/348 (24%), Gaps = 64/348 (18%)

Query: 19  SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           S +    ++S+NI +   +  E  S   +           L +      ADIV LQE+ +
Sbjct: 248 SSSGTFTVLSYNILSDVYATSETYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQN 307

Query: 77  ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL--- 130
                  A    K+ +   Y  +    +S      D       R +   V +        
Sbjct: 308 DHYEEFFAPELDKHGYQALYKRKTNEVYSGNSPTIDGCATFFRRDRFSHVKKYEVEFNKA 367

Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------------Y 177
                ++   +  R+     +  +   + V+     S    D+                +
Sbjct: 368 AQSLTEAVVPSAQRKTALNRLVKDNVALIVVLEAKFSNQGADNPGKRQLLCVANTHVNIH 427

Query: 178 SPSCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGN---------------- 220
                +   Q   L   + +   S  +P ++ GDFN       +                
Sbjct: 428 HDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSMPGSAPHSLLAMGKVDPLHPDLV 487

Query: 221 -------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                                           +       R     +     N       
Sbjct: 488 IDPLGILRPHSKLTHQLPLVSAYSSFARLGVGLGLEQQRRRMDPATNEPLFTNCTRDFIG 547

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +DY      +     + E   E    +D      +  SDH  +  ++
Sbjct: 548 TLDYIFYTADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 595


>gi|154175230|ref|YP_001407411.1| exodeoxyribonuclease III [Campylobacter curvus 525.92]
 gi|112802161|gb|EAT99505.1| exodeoxyribonuclease III [Campylobacter curvus 525.92]
          Length = 252

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +                +   L  D + LQE+    A    
Sbjct: 1   MKLISWNVNGLRAVAAKDGF---------------AWVSGLKPDFLGLQEIKVKEA---D 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P   + + ++   + +  +       ++ +    K     Q+S      +         
Sbjct: 43  VPSEIYKLGFNEISVNSAVRA-----GYSGVMSLSKFNTATQKSLFFNDDEGR------- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E     + + +I+  +    D+         +           +I       +
Sbjct: 91  -----VLEHRFGNVALFNIYFPNGQKDDAR-------LAYKMDFYAKFLAYIDALVAQGL 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GD N                    L     +   +  +  +  F +      +A 
Sbjct: 139 DVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAWLDEVVAHGFIDTFRQAHGDVADAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + Q+    L      +               SDHCP+ 
Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISQSLKNRLKDAFILD-----------NIGGSDHCPVG 247

Query: 300 IDYD 303
           I+ +
Sbjct: 248 IEIE 251


>gi|437053|gb|AAA03710.1| DNaseI precursor [Mus musculus]
          Length = 284

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 85/289 (29%), Gaps = 34/289 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+ ++NI T  E +  +   +             +       DI  +QE+   + V
Sbjct: 20  AGTLRIAAFNIRTFGETKMSNATLSVY---------FVKILSRY--DIAVIQEVRDSHLV 68

Query: 81  A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A  K+  +       +   +++      +         R   V +L       G +   +
Sbjct: 69  AVGKLLDELNRDKPDTYRYVVSEPLGRKSYKEQYLFVYRPDQVSILDSYQYDDGCEPCGN 128

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQ 197
              +R    +       ++    I                 + +    +   L D ++  
Sbjct: 129 DTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEIDALYDVYLDV 176

Query: 198 KKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            ++      +  GDFN   +Y+ ++      +  +        +       + +      
Sbjct: 177 WQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTVTSTHCAY--- 233

Query: 257 IDYF-VMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
            D   V+       ++  S     +  +   S    + +SDH P+ +  
Sbjct: 234 -DRIVVVRALLQAAVVPNSAVPFDFQAEYGLSNQLAEAISDHYPVEVTL 281


>gi|201066143|gb|ACH92481.1| FI09011p [Drosophila melanogaster]
          Length = 603

 Score = 79.2 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 85/336 (25%), Gaps = 46/336 (13%)

Query: 14  VPCTASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
              + S + ++R+VS+N+          +     S       +      L        ++
Sbjct: 266 TTNSLSESNEIRVVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFINEIIGYNS 325

Query: 67  DIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           DI+ LQE+        + ++  +  +            ++  +    ++   +    +  
Sbjct: 326 DILCLQEVDQRIFDFDLKEILEQPPYNYHGIMAPKGKCAEGVAIFFRNSRFDLLDSQILH 385

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELL-------------VEINGKKIWVLDIHLKSFCFL 170
           L  + P L   +S        A                 + I G   +VL  +   +   
Sbjct: 386 LGSNIPALPVFESLWNKIKVNAQLAERICERSTTLQTCLLRIKGTDNYVLVANTHLYFHP 445

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFNRKINYLGNNDDFWKT 227
           D+           +    Q +   I          +  +  GDFN      G      + 
Sbjct: 446 DADHIRLLQMGFSMLFVEQSISKAIKDFNISSHKNIGLIFCGDFNSVP-ECGIYKLMTEQ 504

Query: 228 IDPNDSLIRFPKE------------------KDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           +                                +    +        +DY     + ++ 
Sbjct: 505 LAEKTLEDWQSNAEQAVSNVELAQPFKMASAYGAPEYTHYTTLFAGCLDYVFYQNDRFEV 564

Query: 270 LIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           L      +E     +         SDH  +  D  F
Sbjct: 565 LKVVPLPTEEELKANTAIPSAVFPSDHVALVADLKF 600


>gi|307826200|ref|ZP_07656410.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum
           SV96]
 gi|307732734|gb|EFO03601.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum
           SV96]
          Length = 284

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 84/307 (27%), Gaps = 52/307 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q +R++++NI+                        +R      DAD++FLQEM   +   
Sbjct: 4   QGLRVLTYNIHKGFNVGNRRFV----------LHQIRDALIAADADLMFLQEMQGEHLRH 53

Query: 82  KV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLG 132
           +              +  +      + K    N  H   A+  K+     ++    P   
Sbjct: 54  EKKIADWPVLSQLEFLAENIWPYHAYGKNAIYNAGHHGNAILSKHPFERWENINVSPFPW 113

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCS--------- 182
           A  S      R          G     +     +    + +  +  S S           
Sbjct: 114 ASRSLLHGVIRLPRMAAETAPGSPRHSLPPWKSEVSQAVGNRCDRLSGSSQDVHIVCIHF 173

Query: 183 -----LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                    Q   L   I        P +IAGDFN  +          +    +  L   
Sbjct: 174 GLTGKERRLQISKLCARIDSHVPHDAPLIIAGDFNDWLGQAD------RLFHDHLGLQEV 227

Query: 238 PKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            +E   R   +       +P+D           L   S   + +      +    LSDH 
Sbjct: 228 FRETHGRYARSFPAWMPFLPMDRIYYRG-----LTPVSCERLSH------APWHVLSDHA 276

Query: 297 PISIDYD 303
           P++  + 
Sbjct: 277 PLTASFT 283


>gi|301307682|ref|ZP_07213639.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300834356|gb|EFK64969.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 325

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 81/334 (24%), Gaps = 45/334 (13%)

Query: 1   MIR-KYVLALVFFLVPCTASV------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           M R K++  L    +             + +RL+ WNI                     +
Sbjct: 1   MNRNKFLKTLSAVCISTLLISCGQKKEQKPLRLLYWNIQNGMWCG-----------QDDN 49

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           Y     + K  D DI    E  S        P ++   F      +   +          
Sbjct: 50  YEKFTTWVKQQDPDICVWCEAQSIYKNGTADPLDSQERFLVDNWGVLAKRYGHPYWYIGG 109

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAG----NRRAVELLVEINGK-----KIWVLDIHL 164
              R    +V+   YP+   K              A    + ++ K      +       
Sbjct: 110 H--RDNYPQVITSKYPIENIKKIIGEEPNQVVTHGAGWAKIIVDEKVLNIVTLHTWPQQW 167

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRK-------- 214
                        +        + +++         +     +++ GDFN +        
Sbjct: 168 AFRTEDQEASKAENGGDKYRRMEIEYICKHTIGTSTNATNEYWMMMGDFNSRNRTDNAIY 227

Query: 215 -INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                         I      +    +K            +  IDY    Q  +  +   
Sbjct: 228 RYPEDSPKFLTQDYIAQETPYVDVIAKKYPNEFKTTT-GKEARIDYVYCTQPLFDIIQYA 286

Query: 274 SFSEILYNEDDIKSRG----KRLSDHCPISIDYD 303
                 Y +     +        SDH PI ID+D
Sbjct: 287 DVITDEYTKPVRDPKELSNFWWPSDHRPIIIDFD 320


>gi|229592863|ref|YP_002874982.1| putative endonuclease [Pseudomonas fluorescens SBW25]
 gi|229364729|emb|CAY52702.1| putative endonuclease [Pseudomonas fluorescens SBW25]
          Length = 259

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 88/298 (29%), Gaps = 53/298 (17%)

Query: 13  LVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            VP T SVA  +  +++ NI+                        LR+  +++ AD+VFL
Sbjct: 7   WVPVTPSVAISRFTVLTVNIHKGFTALNRRF----------ILPELREAVRSVGADMVFL 56

Query: 72  QEM-----GSYNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           QE+           +       +     S      + +           A+  K   V  
Sbjct: 57  QEIHGTHERHPQRFSDWPNMPQYEFLADSIWPQFAYGRNAVYPHGDHGNALLSKFQIV-- 114

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                     S S   NR  +  ++ + G    V  I +                     
Sbjct: 115 ---HYDNLDISQSGHENRGLLHCVLRLPGTGQEVHAICIHLGLR-----------EVHRQ 160

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           QQ + L+  I++   +  P V+AGDFN               +  +     F +      
Sbjct: 161 QQLRLLEQRISE-IPAGAPLVVAGDFNDWRQKAD--------LSQSGLREVFIETHGKLP 211

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    +P+D   +       +   +   +             LSDH P+S++ +
Sbjct: 212 RTFPARLPLLPLDRIYVRN-----VKVHNPRVLT------SRPWSHLSDHVPLSVEIE 258


>gi|294142433|ref|YP_003558411.1| extracellular nuclease [Shewanella violacea DSS12]
 gi|293328902|dbj|BAJ03633.1| extracellular nuclease [Shewanella violacea DSS12]
          Length = 883

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/379 (11%), Positives = 100/379 (26%), Gaps = 96/379 (25%)

Query: 22  QKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSD------------------YTLLRQY 60
             +R+ S+N+  L   +   G +L  +   +  +D                   T +   
Sbjct: 466 GDIRVASFNVLNLFTSDSSVGGALNVSCRDQDDADASRGCGRGAHSLDEYLLQRTKIVNA 525

Query: 61  AKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFYSTER--LINHSKRDSNND-IHT 112
            K ++ADI+ L E+ +      +++  +       +  +     +          D I  
Sbjct: 526 IKEMNADILGLMEIENNGFGATSSIQYLVNALNAELPAADAYAFIATADSEFIGTDAITV 585

Query: 113 AIAVRKKNVR------------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
            I  R   V+                  V  +      +         R ++     +NG
Sbjct: 586 GIIYRPGKVKPSGDAFIIATPEQHAPAGVATREDSDKVSLSPAYDKYQRHSLGQGFAVNG 645

Query: 155 KKIWVLDIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES-- 201
           +K+ ++  HLKS                   +             + L + +   +    
Sbjct: 646 EKLTIVVNHLKSKGSSCLEDWTEFAEKSDPADLQGHCNEFRVSAVKVLGESLKDVEGDLL 705

Query: 202 ----------LVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFP 238
                       P  +  DF+   +        W T+D                 +    
Sbjct: 706 IIGDLNAYGLEDPLRVLTDFDAATSDRDIVGASWTTLDGKVYEQTGGVIDKGFGYINLNT 765

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---------- 288
           +       +         +D+ + + +  + +I      I   E ++             
Sbjct: 766 QVHGVDTYSYSYGGELGNLDHALGNASLAQRVIDIQDWHINSVESNLFQYPGKYSGDLAK 825

Query: 289 ---GKRLSDHCPISIDYDF 304
                R SDH P+ +   +
Sbjct: 826 SENAFRSSDHDPVIVALSY 844


>gi|262376870|ref|ZP_06070097.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262308215|gb|EEY89351.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 812

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 93/325 (28%), Gaps = 50/325 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMGSY 77
           +++R  ++N+                  + +++      +    K +DAD+  L E+ + 
Sbjct: 454 KQIRAAAFNVLNYDNGSEKGFPTERGASSETEFKKQHQKIVSALKTIDADVYGLMEIANN 513

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               K           +  + +  ++         A+A+   + RV     P +      
Sbjct: 514 GFDDKSAVAYLSQALGADWKYVIPTQMTKLGTDAIAVAIIYNSKRVKPVGEPAVYD---D 570

Query: 138 SRAGNRRAVELLVE--INGKKIWVLDIHLKS-FCFLDSLENTYSP-------SCSLLSQQ 187
               NR  +    +    GK   ++  HLKS            +          +     
Sbjct: 571 QTEKNRVTMAQSFQSVNGGKIFTIVPNHLKSKGSCPTDKTLADADQGDGQGCWNATRLTA 630

Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            Q L  WI +     +   +++ GD N         D        N  ++   ++     
Sbjct: 631 VQELMQWIAKNPTQVAKPNYLLVGDMN----SYAKEDPILALEKANYKVLLNDEKIGQGK 686

Query: 246 NANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----- 290
            A                   +D+ + D + Y  + +     I  +E       +     
Sbjct: 687 TAYSYVFGVASDANGNGGAGNLDHAIADADLYPMVKRAFAWHINADEPTALDYNEEYKTD 746

Query: 291 ------------RLSDHCPISIDYD 303
                       R SDH P+ +D D
Sbjct: 747 EQIAAFYSDDAFRSSDHDPVIVDMD 771


>gi|261362093|gb|ACX71479.1| sphingomyelinase [Bacillus mycoides]
          Length = 239

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 81/214 (37%), Gaps = 21/214 (9%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+   NA
Sbjct: 33  QNNTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYMK--NQDVVILNEVFDNNA 86

Query: 80  VAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
             ++           T         E         S+      +A+  K   + +  Y +
Sbjct: 87  SNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIIEKIQY-V 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      N+  V   V+ N + + V+  HL++    D++    SP+ S+ ++Q Q 
Sbjct: 146 FEKGCGPDNLSNKGFVYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQLQE 201

Query: 191 LKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223
           ++++I  +   +    +I GD N       NN D
Sbjct: 202 IQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSD 235


>gi|254776497|ref|ZP_05218013.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 254

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 71/306 (23%), Gaps = 82/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +R+ ++NI          +              LR   + LD D++ LQE+         
Sbjct: 1   MRVATFNILHGRTVGDGVI-----------VERLRDCIRRLDPDVLSLQEVDCDQPRSEH 49

Query: 79  -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSY 128
                A A+           +       +   +  D         IA+  +      Q  
Sbjct: 50  ADLTGAAAEAMGAVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVL 109

Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            L      F                 R AV   +     ++ V + HL      +     
Sbjct: 110 RLPRIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLGTPIGELTVANTHLSFVPGWNR---- 165

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                       + L+  I   +    P ++ GD N     +                  
Sbjct: 166 ------------RQLRRLIRDLRGLPGPRLLTGDLNMTPQTVRRWSGMRAL--------- 204

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                               +D+ +   +            +             +SDH 
Sbjct: 205 ------GNAKTFPADNPNRQLDHIL-TDDRRLRCAAVQADLMP------------ISDHR 245

Query: 297 PISIDY 302
           P+ +D 
Sbjct: 246 PLVVDL 251


>gi|297694584|ref|XP_002824554.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
           [Pongo abelii]
 gi|297694586|ref|XP_002824555.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
           [Pongo abelii]
 gi|146286035|sp|A2T7I6|APEX1_PONPY RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|124054149|gb|ABM89264.1| APEX1 [Pongo pygmaeus]
          Length = 318

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +     +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRRFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLTALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|72161438|ref|YP_289095.1| hypothetical protein Tfu_1034 [Thermobifida fusca YX]
 gi|71915170|gb|AAZ55072.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 232

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 75/282 (26%), Gaps = 57/282 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R++S+NI +L +                D   + +  ++   D+V LQE     A 
Sbjct: 2   AAVLRVLSYNIRSLRD----------------DPLAVARVIRSCRPDVVCLQE-----AP 40

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +  +           L     R                   L   +        + R 
Sbjct: 41  RHLLWQTKRRWLARRCGLRLAVGRRPGGLEILT-------APTLAVDHCSHRLLHRYPRL 93

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     L+    ++I V   HL                       A  L  ++  +  
Sbjct: 94  HQRALAIALIRRGRRRIAVAVSHLDL-------------QARARYAHAAQLLAFLGMQPA 140

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P V+A D N + +        W+ +  +  +       +       + R +  ID  
Sbjct: 141 ---PAVLAVDVNERPDGP-----AWQMLATH-LVDAGAHGPEGGEPTFPSWRPRSRIDTI 191

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D+                     +      SDH P+  + 
Sbjct: 192 FVDRRLTVRAAGIPA-------APARRDLVAASDHLPVLAEI 226


>gi|157828881|ref|YP_001495123.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933608|ref|YP_001650397.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa]
 gi|157801362|gb|ABV76615.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908695|gb|ABY72991.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa]
          Length = 260

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +   LLR +    + DI+ LQE+    A    
Sbjct: 1   MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    +++     R
Sbjct: 41  ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFPV----DEIIKDFPNNYCSDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + +      ++ ++  +  F+ S +     +            ++++ KK    
Sbjct: 91  F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN     +                      +TI  +     +     S+    
Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKLRTILNSGFEDLYRLMHPSKQE-F 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L            D      ++ SDH P+ 
Sbjct: 203 SWWDYRARCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255

Query: 300 IDY 302
             +
Sbjct: 256 ASF 258


>gi|261393405|emb|CAX51041.1| putative exodeoxyribonuclease [Neisseria meningitidis 8013]
          Length = 259

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 47  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFDRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|295115708|emb|CBL36555.1| Metal-dependent hydrolase [butyrate-producing bacterium SM4/1]
          Length = 324

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 77/318 (24%), Gaps = 61/318 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L++ N ++L E++                 +  +       D++ LQE+       + 
Sbjct: 1   MKLLTLNTHSLEEKD-----------YEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEA 49

Query: 84  FPKNTWCIFYSTER-------------------------------LINHSKRDSNNDIHT 112
             +      +                                       S +        
Sbjct: 50  DGEVLKKSGFIPCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFLVFWTWTSAKVGYGKYDE 109

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +A+  +          L   +D  +    R+A+ + + I   +  V  +      + D 
Sbjct: 110 GMALMSRRPIAEVSQLFLTDGRDYNNWK-TRKALAITLNIGKGEEPVSFVTAHMGWWKDE 168

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            E            Q + L  +            + GDFN + +  G   D        D
Sbjct: 169 EEPFSR--------QWERLDAF-ASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWKD 219

Query: 233 SLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMD--QNAYKFLIQESFSEILYNED 283
           +     K              +         IDY       ++     +           
Sbjct: 220 AYRAAGKRDGGITIPGAIDGWREDGEVPGMRIDYIWYGRKHDSGDRKSRGDVLIEEVRTV 279

Query: 284 DIKSRGKRLSDHCPISID 301
              S    +SDH  +  +
Sbjct: 280 FNGSDCPVVSDHFGVLAE 297


>gi|224023542|ref|ZP_03641908.1| hypothetical protein BACCOPRO_00244 [Bacteroides coprophilus DSM
           18228]
 gi|224016764|gb|EEF74776.1| hypothetical protein BACCOPRO_00244 [Bacteroides coprophilus DSM
           18228]
          Length = 356

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 86/310 (27%), Gaps = 76/310 (24%)

Query: 19  SVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GS 76
                + +L+++N+   +        +            +  Y +  +ADI+ LQE+  S
Sbjct: 95  PQGGTLVKLLTYNVMNTNLSRPEEGAEEG---------NIVTYLEQSEADIICLQEITSS 145

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              + K FP   +              R         +A   K   +  +      A + 
Sbjct: 146 EKQLRKAFPMYPY-------------VRRIGFATANGVACLSKYPILSAKRIEYASAFN- 191

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL----------------------- 173
                   +    ++I    + +++ HL+S                              
Sbjct: 192 -------GSALFRLKIGKDTVTLINNHLESNKLDAGDKALYKELLKSPDEEKVKTSGKYL 244

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
            +  + + ++ + QA  +   I +        ++ GDFN             + +     
Sbjct: 245 WHKLADAVAIRAAQADSVAKVIAEYGYD--RMLVCGDFNDSPLSYA-RRVIARGLQDA-- 299

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                +      + N+NL     ID+ +   +                      R  R S
Sbjct: 300 --YVERGNGPGFSYNQNLLY-FRIDHILAGTDFRIL-------------HCEVDRSIRTS 343

Query: 294 DHCPISIDYD 303
           DH P+    +
Sbjct: 344 DHYPVWCLLE 353


>gi|182411832|ref|YP_001816898.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
 gi|177839046|gb|ACB73298.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
          Length = 499

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/374 (13%), Positives = 106/374 (28%), Gaps = 76/374 (20%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSL------WKNSVKRTTSDY 54
           M  + + ++ FF      + A+   +V +N+  L + +G +        + +     +  
Sbjct: 1   MQIRKLGSIAFFSALALTAAARPFTVVVYNVENLVDADGQARFEEYQAPRYTPAHVLTKV 60

Query: 55  TLLRQYAKNLD----ADIVFLQEMGSYNAVAKV------------------FPKNTWCIF 92
             +       D     D+V LQE+      A                         +   
Sbjct: 61  QAVASVLARFDDGRGPDVVMLQEIEVDETPAAAALDYEAMLRRYADRKIEDMLGRGFDQE 120

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN---------- 142
            +         +   +   T   V            PL     + +R             
Sbjct: 121 IADLPAEALLAKALADRGLTGYHVIVAENVRSGGDRPLSQKCVTLTRFPVKAVRSHPTVD 180

Query: 143 -RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +E+LVEI+G  +++ + H KS     + E T + +   L Q+   +       ++ 
Sbjct: 181 ARAILEVLVEIDGATLYLFNNHWKSGAGDAATEPTRAANARTLRQRLDEILR-----QDP 235

Query: 202 LVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSRC 245
               VI GDFN + N                     ++        D    + +    + 
Sbjct: 236 QADIVIGGDFNSQYNQKRRYPQMTVTGMNDVLGSQGNELAIRGQQRDLYNLWFELPAEQR 295

Query: 246 NANKNLRNKIPIDYFVMDQNAYK----FLIQESFSEILYNEDDI------------KSRG 289
            ++        +   ++ +  Y       +  SF    ++  +                G
Sbjct: 296 GSDTFQGEWGTLIQMLITRGLYDYRGVQYVDNSFGVAKFDGLNADEKGTPIRWSGEGPAG 355

Query: 290 KRLSDHCPISIDYD 303
              SDH P+   + 
Sbjct: 356 SGFSDHFPVFARFT 369


>gi|41351032|gb|AAH65655.1| Zgc:77395 [Danio rerio]
          Length = 550

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 87/316 (27%), Gaps = 41/316 (12%)

Query: 9   LVFFLVPCTASVAQK------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           LV  + PC    A        VR+ +WN+             +          ++     
Sbjct: 225 LVTSVRPCVEPPAGTRDGKPVVRVATWNLQ---------RCSSEKANNPGVKEVVCMTLL 275

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------HSKRDSNNDI 110
             D  ++ +Q++    A+ K   +       S  R  +             +   ++   
Sbjct: 276 ENDIKLLAVQDLADREALDKFCAELNQPTLCSVRRWKSARGLWKCAVSEKPNGVSNSAPE 335

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
            +       +   ++ S  L     + +   + +       I   ++ ++++ L +    
Sbjct: 336 FSGFLWDCFSGIEMKDSAVLESFTTNGNGNPHPQPYLGHFYIGSSELTLVNVLLTAAPSP 395

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
              +   +       +    L   + +  +     ++ G F    +         + +  
Sbjct: 396 TENKRKSTSDDLKTHK----LGSGVQETLKGERDLLVLGHFGVAPDSSEMEILRKEKLSA 451

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-QESFSEILYNEDDIKSRG 289
             +   F         + +  +    +D     ++  K    Q S          I    
Sbjct: 452 LLAPSVFTNI------STRTPQGSRSLDNIWASRSLRKTYTGQCSVVREGLTNPWIPDNW 505

Query: 290 KR---LSDHCPISIDY 302
                 S+HCP+  ++
Sbjct: 506 SWGGVASEHCPVVAEF 521


>gi|45659020|ref|YP_003106.1| hemolysin/sphingomyelinase-like [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45602266|gb|AAS71743.1| hemolysin/sphingomyelinase-like [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 558

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 85/298 (28%), Gaps = 30/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++S+N+   S+++    +            LL +     + D++ L  +   NA   
Sbjct: 79  DLNILSYNLFLYSKEDIYFGY----WEEEKRAELLGKSKFTKNQDVIVLSRVFDTNARNT 134

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT-------AIAVRKKNVRVLQQSYPLLGAKD 135
           +           T+ +                      + +  K     +  Y       
Sbjct: 135 LLDNLNLEYPDQTDVIGKTKYGWDQTLGDFRQQINNGGVVILSKWPIQEKIQYIFKNHGC 194

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 N+    + ++   + I ++    +S     S         +    Q   +K +I
Sbjct: 195 GNDTFYNKGFAYVKIKKGSQIIHIVGTDTQSEDSTCSDLG-----VNARINQLTEIKKFI 249

Query: 196 T-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------- 246
             ++  +    +IAG  N   +      +    ++ N+                      
Sbjct: 250 DSKRISNKEIVLIAGALNVDKSNQSEYKNMLNILEVNEPNYAGIPFTWDTKKNKIAAYNN 309

Query: 247 -ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCPIS 299
                 +     +Y ++ +N ++  I ++ +    +    K +        SDH PI 
Sbjct: 310 IYYSWNQTSNYGEYILVSKNHFQLPIWQNLAYDPISPTTWKRKNGYTSYEFSDHFPIY 367


>gi|308183626|ref|YP_003927753.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4]
 gi|308062786|gb|ADO04674.1| exodeoxyribonuclease III [Helicobacter pylori Cuz20]
 gi|308065811|gb|ADO07703.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4]
          Length = 250

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DADI  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADIFCIQE----SKMQQD 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  +++++++ +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYVPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|288556715|ref|YP_003428650.1| exodeoxyribonuclease [Bacillus pseudofirmus OF4]
 gi|288547875|gb|ADC51758.1| exodeoxyribonuclease [Bacillus pseudofirmus OF4]
          Length = 251

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 79/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +    +ADI  LQE          
Sbjct: 1   MKLISWNVNGLRACVKKGF---------------LDFFHEQNADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  F++      +S           I+VR     +  +                R
Sbjct: 45  LELDGYHQFWNYALKKGYSGTAVFTKQK-PISVRYGVGELESED-------------EGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     ++++++  +     S           L +    L            
Sbjct: 91  I-----ITLEFDSFYLVNVYTINAKRDLSRLPERLEWEDALKEYLLDLDRH--------K 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N     +                       T+  +  +  F      R +A 
Sbjct: 138 PVVYCGDLNVAHAEVDLKNARSNHGNSGFTLEERGKMTTLLESGFIDSFRYLYPERTDAF 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++     + + + S    +             SDHCPI 
Sbjct: 198 TWWSYMRDVRARNIGWRIDYFIVSTQLKEKINEASIYAEVL-----------GSDHCPIG 246

Query: 300 IDYD 303
           ++ D
Sbjct: 247 LELD 250


>gi|219116713|ref|XP_002179151.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409042|gb|EEC48974.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 765

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/365 (9%), Positives = 88/365 (24%), Gaps = 79/365 (21%)

Query: 15  PCTASVAQKVRLVSWNI---NTLSE--------QEGVSLWKNSVKRTTSDYTLLRQYAKN 63
               +    +R++++N+       +                  V +      L+      
Sbjct: 396 SSGEASDAPLRIMTYNVLADQNAFDFGVSGKVAHSYAEYLTPQVLKRERRLPLILHEILA 455

Query: 64  LDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI------ 114
             AD+V LQE+                 +  F++++      +  +   + T        
Sbjct: 456 HQADVVCLQEVDEYVYETLFKSALRYAGYDGFFTSKENEGSREGCATFWLTTRFDPVPES 515

Query: 115 -----AVRKKNVRVLQQSYPLLGAKDS-----FSRAGNRRAVELLVEINGKKIWVLDIHL 164
                 +R       +       A +        R   R  V   +   G  + ++ + +
Sbjct: 516 NKKSHLIRDMFPFESKTDDQEWTALNDIAGLLGKRRDLRYIVAAKL---GHILHLVPLQV 572

Query: 165 KSF----CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLG 219
           K         ++    +  +  +   Q   +   +++  +      V+ GD N  +    
Sbjct: 573 KGDTKTIWVANTHLFYHPDASHIRLMQMYLICRELSESLKTKDGGIVLCGDMNSSLTNSP 632

Query: 220 NNDDFWKTI------------------------DPNDSLIRFPKEKDSRCNA-------- 247
                 + +                         PN     FP                 
Sbjct: 633 GKLLIDRIVPKNFRNLRTDLNGFRWSRQWRQPDSPNAFDDDFPSLSLPDSFPILRSALSE 692

Query: 248 ---NKNL------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +         +  +D+ ++  +          S      D      +  SDH  +
Sbjct: 693 TPAFTHFIGGLERGFRGTLDHILVSPDLIPLKSGPMPSMRDVTRDTAMPSERIPSDHVSL 752

Query: 299 SIDYD 303
             + D
Sbjct: 753 ICEVD 757


>gi|71043968|ref|NP_080465.3| endonuclease/exonuclease/phosphatase family domain-containing
           protein 1 [Mus musculus]
 gi|123783293|sp|Q3TGW2|EEPD1_MOUSE RecName: Full=Endonuclease/exonuclease/phosphatase family
           domain-containing protein 1
 gi|74214399|dbj|BAE40436.1| unnamed protein product [Mus musculus]
 gi|148693355|gb|EDL25302.1| RIKEN cDNA 2310005P05 [Mus musculus]
          Length = 569

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 81/296 (27%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 FRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDKEALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDI------------HTAIAVRKK-NVRVLQQSYPL 130
             +    I  +  +         +               ++        NV +       
Sbjct: 312 CTELNQPILPNIRKWKGSRGCWRSIVAEKPSNQLQKGPCYSGFLWDTAANVELRDIPGRE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +  ++A          ++    + ++++ L +     +  ++ + S          
Sbjct: 372 SSPSNGHAKAVGPSPFLARFKVGSNDLTLVNLQLTALALPGAENSSKNHSDGHR---LLN 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     VI GDF +  +    +      +         P    +  +    
Sbjct: 429 FALTLQETLKGEKDVVILGDFGQGPDSNDYD-----ILRREKFHHLVPAHTFTNISTRNP 483

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
             +K   D   + ++  K                 I          S+HCP+  + 
Sbjct: 484 QGSKSV-DNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538


>gi|12843816|dbj|BAB26125.1| unnamed protein product [Mus musculus]
          Length = 569

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 81/296 (27%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 FRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDKEALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDI------------HTAIAVRKK-NVRVLQQSYPL 130
             +    I  +  +         +               ++        NV +       
Sbjct: 312 CTELNQPILPNIRKWKGSRGCWRSIVAEKPSNQLQKGPCYSGFLWDTAANVELRDIPGRE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +  ++A          ++    + ++++ L +     +  ++ + S          
Sbjct: 372 SSPSNGHAKAVGPSPFLARFKVGSNDLTLVNLQLTALALPGAENSSKNHSDGHR---LLN 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     VI GDF +  +    +      +         P    +  +    
Sbjct: 429 FALTLQETLKGEKDVVILGDFGQGPDSNDYD-----ILRREKFHHLVPAHTFTNISTRNP 483

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
             +K   D   + ++  K                 I          S+HCP+  + 
Sbjct: 484 QGSKSV-DNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538


>gi|32266427|ref|NP_860459.1| exodeoxyribonuclease LexA [Helicobacter hepaticus ATCC 51449]
 gi|32262477|gb|AAP77525.1| exodeoxyribonuclease LexA [Helicobacter hepaticus ATCC 51449]
          Length = 252

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 77/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +   ++ADI  +QE          
Sbjct: 1   MKLISWNVNGLRACMNKGFM---------------DFFNEVNADIFCIQESKMCKE-QAQ 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  ++++     +          + + +  K   +            ++     R
Sbjct: 45  FHFENYKEYWNSAEKKGY----------SGVVILSKTQPINVA----YDMGITYHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +       ++++++  +        +             + L+        +  
Sbjct: 91  I-----ITAEYPHFYLVNVYTPNSKRELERLDYRMKWEDDFRAFVKNLE--------NHK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                         +    +     +  F     +   A 
Sbjct: 138 SVIICGDLNVAHQEIDLKNPKTNRRNAGFTDEERNKMSALLDAGFIDTFRYFYPTLTGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  Q+    L   +    ++            SDHCP+ 
Sbjct: 198 SWWSYMGKARENNTGWRIDYFLCSQSLTPSLKDANIYPHIF-----------GSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|50511063|dbj|BAD32517.1| mKIAA1706 protein [Mus musculus]
          Length = 607

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 81/296 (27%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 299 FRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDKEALEKF 349

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDI------------HTAIAVRKK-NVRVLQQSYPL 130
             +    I  +  +         +               ++        NV +       
Sbjct: 350 CTELNQPILPNIRKWKGSRGCWRSIVAEKPSNQLQKGPCYSGFLWDTAANVELRDIPGRE 409

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +  ++A          ++    + ++++ L +     +  ++ + S          
Sbjct: 410 SSPSNGHAKAVGPSPFLARFKVGSNDLTLVNLQLTALALPGAENSSKNHSDGHR---LLN 466

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     VI GDF +  +    +      +         P    +  +    
Sbjct: 467 FALTLQETLKGEKDVVILGDFGQGPDSNDYD-----ILRREKFHHLVPAHTFTNISTRNP 521

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
             +K   D   + ++  K                 I          S+HCP+  + 
Sbjct: 522 QGSKSV-DNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 576


>gi|331092367|ref|ZP_08341193.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401391|gb|EGG80977.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 250

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 74/305 (24%), Gaps = 82/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                         +    DADI  +QE          
Sbjct: 1   MKLISWNVNGIRACVQKGF---------------LDFFHQADADIFCIQESKMQEG-QLQ 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                                         
Sbjct: 45  LELEGYHQYWNYAEKKGYSGTAVFTKE-----------------------------EPLS 75

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--S 201
               + +E + K+  ++ +    F F            + L  + QW  D++   K+   
Sbjct: 76  VTYGMGIEEHDKEGRLITLEFPEFYFATVYTPNSQNELARLDYRMQWETDFLAYMKKLEE 135

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P +  GD N                           +  +     +  F         
Sbjct: 136 KKPVIFCGDLNVAHREIDLKNPKTNRKNAGFTDEERGKFGELLDAGFIDTFRYFYPDMEG 195

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF + ++  + L        ++            SDHCP
Sbjct: 196 IYSWWSYRFRAREKNAGWRIDYFCVSESLRERLADAKILTYIF-----------GSDHCP 244

Query: 298 ISIDY 302
           + +D 
Sbjct: 245 VELDL 249


>gi|311032922|ref|ZP_07711012.1| exodeoxyribonuclease III [Bacillus sp. m3-13]
          Length = 254

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 70/304 (23%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N +                         Y  ++DADI  +QE          
Sbjct: 1   MKLVSWNVNGIRACVKKGFM---------------DYFNDMDADIFCIQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S       +             LQ  Y L   K        R
Sbjct: 45  LDTPGYYQYWNYAIKKGYSGTAVFTKMKP-----------LQVRYGLDEKKAEECEPEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++++++  +     +                + L            
Sbjct: 94  I-----LTLEYEDFFLVNVYTPNSQRDLARLPFRLDWEDRFLAYIKMLDQ--------QK 140

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                              +        F        +  
Sbjct: 141 SVIVCGDLNVAHAEIDLKNPKSNRNNSGFTEEERGKMTRLLGEGFSDTFRHFYPELTDKY 200

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++  N    L                      SDHCP+ 
Sbjct: 201 TWWSYMNKVRERNIGWRIDYFIVSDNLKGSLKDAEIH-----------SDIMGSDHCPVV 249

Query: 300 IDYD 303
           +  +
Sbjct: 250 LILN 253


>gi|261840198|gb|ACX99963.1| exodeoxyribonuclease [Helicobacter pylori 52]
          Length = 250

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE         +
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE-SKMQQEQNI 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  F++           +    ++ +    K   +       +   D   R    
Sbjct: 45  FEFKGYFDFWN----------CAIKKGYSGVVTFTKKEPLSVSYGINIDEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|170758666|ref|YP_001787187.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169405655|gb|ACA54066.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 352

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 101/311 (32%), Gaps = 44/311 (14%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               +V++NI               G     +S ++T  +   +  + K  ++  +FLQE
Sbjct: 53  DSFSIVTFNIGYGGMDDKQDFFMDGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQE 112

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQS 127
           + + +   + F  + +    ++ +  + S   +       + + K +  V      L + 
Sbjct: 113 VDTNS--TRSFRIDQYDYLKNSLKAYSSSMALNYKTPWVPVPILKPHGTVNAGLVNLSKY 170

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 +  +    +       ++    +  V   + K    ++S  + Y     +  QQ
Sbjct: 171 KINSATRYQYPGKESWPRQLAELDRCFLESRVSLENGKELVLINSHLSAYDKGGKIRKQQ 230

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDP--NDSLIR 236
             +LK++I ++ +     ++ GD+N  I               D   K  +    +    
Sbjct: 231 LSFLKNYIIKEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKW 290

Query: 237 FPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID F++  N     ++       Y+ +   +    
Sbjct: 291 VADKDVPTTRTDARPYKKGENFTAVIDGFLVSDNIEATSVKA------YSMEFKNT---- 340

Query: 292 LSDHCPISIDY 302
             DH P+ +++
Sbjct: 341 --DHNPVKMEF 349


>gi|210622632|ref|ZP_03293292.1| hypothetical protein CLOHIR_01240 [Clostridium hiranonis DSM 13275]
 gi|210154133|gb|EEA85139.1| hypothetical protein CLOHIR_01240 [Clostridium hiranonis DSM 13275]
          Length = 250

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 78/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                         +   +DADI  LQE         +
Sbjct: 1   MKFISWNVNGLRACVTKGFM---------------DFFNEVDADIFCLQETKLQEGQIDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +  +++           ++   ++  A+  K   +       +   D   R    
Sbjct: 46  NPE-GYESYWN----------YADKKGYSGTAIFTKKKPLSVAYGIGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  + + ++  +                      + L        +S  
Sbjct: 91  -----VITLEFEDFYFVTVYTPNSQTELKRLEYRMRWEDDFRAYLKNL--------DSKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                         + +     +  +  F           
Sbjct: 138 PVVMCGDLNVAHKEIDLKNPKTNRKNAGFTDEERNKFTEFLESGFIDTFRYFYPDAEGMY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF   ++    L+       +             SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFCTSESMKDRLVSAKIHNEVL-----------GSDHCPVE 246

Query: 300 IDYD 303
           +  +
Sbjct: 247 LVIE 250


>gi|189485031|ref|YP_001955972.1| exodeoxyribonuclease III [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170286990|dbj|BAG13511.1| exodeoxyribonuclease III [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 251

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 81/304 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           +++VSWN+N                    D+T    + K+ +ADIV +QE  +       
Sbjct: 1   MKIVSWNVN------------GIRAIYKKDFTA---WFKDENADIVCVQETKAGETQFPK 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   N +  + S+     +S     + I     +                 ++      
Sbjct: 46  DIKEINGYNFYCSSAEKKGYSGVAVWSKIKPDFVIAS--------------IENKVFDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      + ++ K   + +++  +                   +   +L  ++ Q K+ 
Sbjct: 92  GRI-----IRLDFKDFIIFNVYFPNG-------GASQERLKYKMEFYDYLIKYLKQFKDK 139

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD+N                    +    +    +  +  +  F        N
Sbjct: 140 T--VIICGDYNTAHFSIDLARPKENEKVSGFMPEEREKLDNLVSSGFIDTFRYFNKEPGN 197

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  K           ID+F M Q++ K L                 +    SDHCP
Sbjct: 198 -YTWWDYKTAARSRNIGWRIDHFFMSQHSVKRLKSADIK-----------KSVSGSDHCP 245

Query: 298 ISID 301
           +SI 
Sbjct: 246 VSIT 249


>gi|34581351|ref|ZP_00142831.1| exodeoxyribonuclease III [Rickettsia sibirica 246]
 gi|28262736|gb|EAA26240.1| exodeoxyribonuclease III [Rickettsia sibirica 246]
          Length = 260

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +   LLR +    + DI+ LQE+    A    
Sbjct: 1   MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    +++     R
Sbjct: 41  ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + +      ++ ++  +  F+ S +     +            ++++ KK    
Sbjct: 91  F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN     +                      +TI  +     +     S+    
Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKLRTILNSGFEDLYRLMHPSKQE-F 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L            D      ++ SDH P+ 
Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRAQEKPSDHIPVI 255

Query: 300 IDY 302
             +
Sbjct: 256 ASF 258


>gi|326480264|gb|EGE04274.1| endonuclease/exonuclease/phosphatase [Trichophyton equinum CBS
           127.97]
          Length = 292

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 77/294 (26%), Gaps = 24/294 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82
            R+++ NI   +             R       L  Y   L+ +  V LQE         
Sbjct: 8   FRILTHNIRYATTSPSAGEQP-WSVRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVTDV 65

Query: 83  VFPK---------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +            + W  +         +   S      A+   ++   V     P + +
Sbjct: 66  LAGLNSRPHAAETDQWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPSVPS 125

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           K  +  A  R     +       I VL ++       D    +   S  L+      ++ 
Sbjct: 126 K-GWDAASIRIVTIGVFNHKSSNITVLAMNTHL---DDQGSKSRFESAKLI---LSLIQK 178

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANK 249
           ++ +    +    +AGDFN   +     +         D+  + P       +       
Sbjct: 179 YLARY-PEVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFD 237

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY ++   +                 +        SDH  +  D  
Sbjct: 238 GKTKGSRIDYVMVGPQSCSSASIPFTVNGYAVMPNRFDNRIYNSDHRAVVADVT 291


>gi|297671007|ref|XP_002813640.1| PREDICTED: deoxyribonuclease gamma-like isoform 2 [Pongo abelii]
          Length = 305

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 92/290 (31%), Gaps = 32/290 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
            A  +R+ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N 
Sbjct: 17  SALALRICSFNVRSFGE---------SKQEDQNAMDVIVKIIKRC--DIILVMEIKDSNN 65

Query: 79  ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + +   +N+         + +   R++  + + A   ++K V V ++SY     +
Sbjct: 66  RICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQ 123

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D      +R    +  +     +    I         S+         L+         W
Sbjct: 124 DGDEDVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSV----REIDELVEVYMDVKHRW 179

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                     F+  GDFN   +Y+         +  +   +    +++            
Sbjct: 180 ------KAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAY 233

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             I   +  Q     ++ +S S   + +    +  + L  SDH P+    
Sbjct: 234 DRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281


>gi|109946643|ref|YP_663871.1| exodeoxyribonuclease III [Helicobacter acinonychis str. Sheeba]
 gi|109713864|emb|CAJ98872.1| exodeoxyribonuclease [Helicobacter acinonychis str. Sheeba]
          Length = 250

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DADI  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADIFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGRI--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +    +  ++++I+  +     S  N          +  + L+           
Sbjct: 92  ------ITCEFESFYLVNIYTPNSQQALSRLNYRMSWEVEFRRFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNTGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+   +    L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNSLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|25029040|ref|NP_739094.1| hypothetical protein CE2484 [Corynebacterium efficiens YS-314]
 gi|259505969|ref|ZP_05748871.1| 5'-nucleotidase family protein [Corynebacterium efficiens YS-314]
 gi|23494327|dbj|BAC19294.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166450|gb|EEW51004.1| 5'-nucleotidase family protein [Corynebacterium efficiens YS-314]
          Length = 850

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/345 (11%), Positives = 92/345 (26%), Gaps = 61/345 (17%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN---------------------SVKRTT 51
            +    +V     + S+N+       G     +                     S +   
Sbjct: 472 ALAAIDAVEGDFHIASFNVLNYFTSLGEDYDCDAYTDINGNPISARNCDVRGAYSQQAFE 531

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYSTER--L 98
                +      LD D++ L+E+ +             A+  +          +      
Sbjct: 532 DQQGKIVAAINRLDVDVLGLEEIENTAAVTGDVSRRDEALNALVDALNTAHGSTRWAAVE 591

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
                    + I  A       V+ + +S        + +           ++   +   
Sbjct: 592 SPLQLGTDEDVIRVAFIYDVTTVKPVGESRIFDDPAYTGTARQPLAQEFQPLDETKESFV 651

Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNR 213
            +  H KS     + +         S ++   QAQ L D +  + + +  P  I GD N 
Sbjct: 652 GVVNHFKSKGSPVNGDADTGDGQGHSANVRLAQAQALIDHLENQDDWADKPVFILGDLN- 710

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                 + +    T+          +       + +       +D+ + +  A   ++  
Sbjct: 711 ----AYSRETVLSTLAGAGYSNIAAEYDAG--YSYQFSGRIGSLDHALGNDAAMNRVVDA 764

Query: 274 SFSEILYNEDDIKSRGK---------------RLSDHCPISIDYD 303
              +I  +E       +               R SDH PI + ++
Sbjct: 765 EVWDINADESIAFEYSRRNYNTVDVFEADNVFRSSDHDPIKVGFN 809


>gi|296126298|ref|YP_003633550.1| exodeoxyribonuclease III Xth [Brachyspira murdochii DSM 12563]
 gi|296018114|gb|ADG71351.1| exodeoxyribonuclease III Xth [Brachyspira murdochii DSM 12563]
          Length = 257

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 78/301 (25%), Gaps = 70/301 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N +                      L  + K  + DI+ LQE     A  + 
Sbjct: 1   MKIISWNVNGIRAAYKKG---------------LVDFIKKENPDIICLQE---TKAFEEQ 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P++   I      +            ++ +A+  K          L      FS    R
Sbjct: 43  LPEDLRNIEGYELFINPADPEV--KKGYSGVAIYTKLKPNKVIKNKLGS---KFSDNEGR 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +      + +++  +    +   N        +++    L        +S  
Sbjct: 98  I-----LSLEFDDFTIFNVYFPNGGKSEEHFNYKLSFYDAITKHLTKL--------KSKT 144

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNANK 249
             ++ GD N     +                          N       +          
Sbjct: 145 NVILCGDMNIAHEAIDLARPKENEKSIGFLPEEREKITEFLNKGFTDTFRMFVKEGGHYS 204

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               K           IDYF ++    + + +                    SDHCPI I
Sbjct: 205 WWDMKTRSREKNVGWRIDYFFVNNEIAQNIKRADIMT-----------DVMGSDHCPILI 253

Query: 301 D 301
           +
Sbjct: 254 E 254


>gi|154151954|ref|YP_001405572.1| exodeoxyribonuclease III Xth [Candidatus Methanoregula boonei 6A8]
 gi|154000506|gb|ABS56929.1| exodeoxyribonuclease III Xth [Methanoregula boonei 6A8]
          Length = 270

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 78/305 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
            ++SWN+N L              R   D        +  + +IV +QE          +
Sbjct: 3   TILSWNVNGL--------------RGCYDRKQFLPVFR-HNPEIVCVQETKAPGEKLPER 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V     +  F+S     + +           + +  ++  +  Q     G  D       
Sbjct: 48  VRNLYGYHTFFSAVPAGSTA----------GVGLFTRHEPLSVQ----YGFGDPDFDNKG 93

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     ++  +  +  +L+I            +                  +I    E  
Sbjct: 94  R-----VLMADYGRFVLLNIAFPLGIKPMGNLDNKLRFY-------DAFLLYIRSLCEQG 141

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GDFN                       +       +        F         
Sbjct: 142 RAVIVCGDFNVAHTDKDLYNPPKKPVRQVGISPDERGRIDQLIALGFTDTFRLFHAGPGY 201

Query: 247 ANKNL--------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
             +               IDY  + Q    F+   +    +           + SDHCP+
Sbjct: 202 YTRWPFQNNSRERNFGWRIDYCFVSQALRPFVADATILHEI-----------KGSDHCPV 250

Query: 299 SIDYD 303
           +++ +
Sbjct: 251 ALELN 255


>gi|332216281|ref|XP_003257277.1| PREDICTED: deoxyribonuclease gamma-like [Nomascus leucogenys]
          Length = 304

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 93/290 (32%), Gaps = 32/290 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
            A  +R+ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N 
Sbjct: 16  SALALRICSFNVRSFGE---------SKQEDQNAMDVIVKIIKRC--DIILVMEIKDSNN 64

Query: 79  ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + +   +N+         + +   R++  + + A   ++K V V ++SY     +
Sbjct: 65  RICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQ 122

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D  +   +R    +  +     +    I         S+         L+         W
Sbjct: 123 DGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSV----KEIDELVEVYMDVKHRW 178

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                     F+  GDFN   +Y+         +  +   +    +++            
Sbjct: 179 ------KAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAY 232

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             I   +  Q     ++ +S S   + +    +  + L  SDH P+    
Sbjct: 233 DRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 280


>gi|319788340|ref|YP_004147815.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
 gi|317466852|gb|ADV28584.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
          Length = 276

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 85/301 (28%), Gaps = 60/301 (19%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLD 65
           ++   A   + +R++S NI   S     S +            R  +    + Q A    
Sbjct: 18  MLEAGAPPTRLLRVLSANIQAGSSTRRYSDYVTRSWSHALPAGRKRTSLDAIAQLAAAH- 76

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            DIV LQE    +  +    +  +    +      +   R       +A  +  K   V 
Sbjct: 77  -DIVGLQEADPGSLRSGFTNQTHYLAQRAGFHYWTHQPNRSVGGVASSANGLLSKLEPVR 135

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
              + L G      R   R  +        + + V   HL                    
Sbjct: 136 ISDHALPG------RIRGRGVLLGHFGDGREGLTVAVAHLSLG-------------AKSR 176

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             Q  ++ + +     +    V+ GDFN   +               + L R    +   
Sbjct: 177 MSQLSFIAELLQDHPNA----VLMGDFNCLPDVPEM-----------ELLYRTTSLRPPE 221

Query: 245 C--NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           C      + + +  ID+ ++  +                    K+     SDH  +++D 
Sbjct: 222 CVVPTFPSWKPQRAIDHILVSGDLRC--------------AGAKALPAAFSDHLALAMDI 267

Query: 303 D 303
           +
Sbjct: 268 E 268


>gi|296209068|ref|XP_002751376.1| PREDICTED: endonuclease/exonuclease/phosphatase family
           domain-containing protein 1 [Callithrix jacchus]
          Length = 565

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 79/296 (26%), Gaps = 39/296 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKK-NVRVLQQSYPL 130
             +       +  +                         +         +V +       
Sbjct: 312 CVELNQPTLPNIRKWKGPRGCWKAVVAEKPSSQLQKGAGYAGFLWDAAASVELRDAGSQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +     S  ++          +   
Sbjct: 372 SSPSNGHGKPVGLSPYLARFKVGSHDLTLVNLHLAALTLPGSENHSD-------GHRLAS 424

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +    +    +   P      F         + KN
Sbjct: 425 FAQTLQETLKGEKDVIILGDFGQGPDSNDYDILRKEKFQPLIPAHTFTNI------STKN 478

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  + 
Sbjct: 479 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 534


>gi|257866617|ref|ZP_05646270.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257872867|ref|ZP_05652520.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257800575|gb|EEV29603.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257807031|gb|EEV35853.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
          Length = 257

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/284 (9%), Positives = 69/284 (24%), Gaps = 35/284 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++  ++N+        V    +   +       +       D D++ +QE    +  A +
Sbjct: 1   MKAATYNLR-------VDTDYDQEWQWHYRSEAVCSLIDYYDWDVLAIQEAR-PSQFADL 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    +        +         A  +       L               A +R
Sbjct: 53  AKLTQYASVTAERDGDGLGEGIGLYYQKEAFELLASGSFWLS--LTPTEPSIHPEAAYSR 110

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V  +++      ++                +       +    + L D I +      
Sbjct: 111 LCVWAVLQEKKNPPFLAITT-------HLDNISEMARFEGMKVILEQLADQIERY----- 158

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDYF 260
           P ++ GD N +     +        +  +   +                  +    IDY 
Sbjct: 159 PVLLMGDLNAEPTERVHRYLEQHFQNAKEHGQKPHHGPKGSYQNFIYTLPWQELEEIDYI 218

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       + F+ +           +  SDH P+  +  F
Sbjct: 219 Y----------TKGFTVVKTACLTDSYDRRFPSDHFPLEAEVQF 252


>gi|210617713|ref|ZP_03291707.1| hypothetical protein CLONEX_03931 [Clostridium nexile DSM 1787]
 gi|210149155|gb|EEA80164.1| hypothetical protein CLONEX_03931 [Clostridium nexile DSM 1787]
          Length = 250

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 78/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                        ++ +  DADI  +QE     A    
Sbjct: 1   MKLISWNVNGIRACVQKGF---------------LEFFQEADADIFCIQE-SKMQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  AV  K   +  Q    +   D   R    
Sbjct: 45  LELEGYHQYWNYAEKKGY----------SGTAVFTKKEPLSVQYGIGIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ + + ++  +     +  +      +      + L+           
Sbjct: 91  -----VITLEFEEFYFVTVYTPNSQSELARLSYRIQWETDFLAYLKGLEQ--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + AGD N                           +  +     +  F           
Sbjct: 138 PVIFAGDLNVAYAEIDLKNPKTNRKNAGFTDEERAKFGEVLKAGFIDTFRYFYPEMEGIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + ++    L                      SDHCPI 
Sbjct: 198 SWWSYRFSARAKNAGWRIDYFCVSESLKDRLADAKILT-----------DVMGSDHCPIE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDL 249


>gi|56698248|ref|YP_168621.1| exodeoxyribonuclease III, putative [Ruegeria pomeroyi DSS-3]
 gi|56679985|gb|AAV96651.1| exodeoxyribonuclease III, putative [Ruegeria pomeroyi DSS-3]
          Length = 262

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/308 (9%), Positives = 69/308 (22%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
              L +WNIN                       ++ +       DI+ LQE+ S      
Sbjct: 2   PFTLATWNIN----------------SVRLREPIVCKLLAEEGPDILCLQEIKSPVDKMP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F    +                     +  +A+  +                +    
Sbjct: 46  VEGFADLGYRHV-----------VAHGQKGYNGVAILSRLPIEEVGREDFATLGHARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V   +E     + + + ++ +    D  +   +            ++DW      
Sbjct: 93  -----VAARLENG---VTIHNFYVPAG--GDVPDREVNEKFGQKLDYLTEMRDWFHANAP 142

Query: 201 SLVPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRC 245
                ++ GD N          +    K +               +   +   ++   + 
Sbjct: 143 EKS--ILVGDLNIAPREDDVWNHKQLLKIVSHTPIEVDHLGQVMDSGKWVDITRQDIPQG 200

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +                        ++ SDH
Sbjct: 201 LLYSWWSYRAKDWSAADKGRRLDHVWATPDISNAGHSS-------RILRDARGWEQPSDH 253

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 254 APVFASFD 261


>gi|118579337|ref|YP_900587.1| endonuclease/exonuclease/phosphatase [Pelobacter propionicus DSM
           2379]
 gi|118502047|gb|ABK98529.1| Endonuclease/exonuclease/phosphatase [Pelobacter propionicus DSM
           2379]
          Length = 354

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 85/295 (28%), Gaps = 49/295 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +S A  +R+++WN+   S             R       L+      + DIV  Q   + 
Sbjct: 98  SSTATPLRVMTWNVKYCS-------------RGKLAQQALKDDIARANPDIVLFQ--DAG 142

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             +            + ++     + R    +       R    +     Y +       
Sbjct: 143 GVMQGALGSYFAKWHFHSQEQFVIASRFPLEETEILPISRPSGKQKTFARYRVKIGST-- 200

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                     +  E   + +  +    K   +L      +  + S+   QA+ ++++I+Q
Sbjct: 201 ----PVSLYNIHFESPREGLSAVGSARKRPWYLPKGIQRFERNVSIRLSQARMVQEFISQ 256

Query: 198 KKESLVPFVIAGDFNRK--------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                 P +I GD N          +   G +D F +              +        
Sbjct: 257 ---EKGPVIIGGDLNSPDASQVCAGLRDAGLHDAFAEGGRGYGYTYGHFLLQRRLPWMRV 313

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +    + ID+ +M  +              +     ++     SDH P+  D  F
Sbjct: 314 SW---MRIDHVMMSSH--------------FKALGCRTGTGEASDHRPVIADLLF 351


>gi|311900422|dbj|BAJ32830.1| putative exodeoxyribonuclease [Kitasatospora setae KM-6054]
          Length = 272

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/273 (9%), Positives = 69/273 (25%), Gaps = 57/273 (20%)

Query: 59  QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++    ++++V LQE+   +      +   + W   ++           +       +AV
Sbjct: 23  EWIDATESEVVCLQEVRAETDQFADVLARLDGWHAVWAP----------AAAKGRAGVAV 72

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +      +        D   R          +++ G  + V  ++L S       ++ 
Sbjct: 73  LSRRAPEATRIGFGSAEFDVSGR-------YAELDLPG--LTVASLYLPSGEVGTDRQDE 123

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                +        L+             ++ GD+N                        
Sbjct: 124 KERFMAEFLVHLGELRARA---AADGREVLVCGDWNIAHREADLRNWKANQKKAGFLPEE 180

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNK---------IPIDYFVMDQNAYKFL 270
                + +D +  +    +               +           IDY +         
Sbjct: 181 RAWLSRVLDEHGYVDVLRQHHADVAEGPYSWWSYRGRAFDNDAGWRIDYQMATPGLAARC 240

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +   +  +R SDH P++  +D
Sbjct: 241 TAA-------RVERAATHAERWSDHAPVTAVFD 266


>gi|288803025|ref|ZP_06408461.1| exodeoxyribonuclease III [Prevotella melaninogenica D18]
 gi|288334542|gb|EFC72981.1| exodeoxyribonuclease III [Prevotella melaninogenica D18]
          Length = 249

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 82/302 (27%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G                   Q  K+LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRACVGKEFE---------------QQFKDLDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  K+  +       +   D   R    
Sbjct: 45  ISFLGYESYWN----------YADKKGYSGTAIFTKHKPLSVTYGINIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                   +     + ++  K +   
Sbjct: 91  -----VITLEMDDFYLVTVYTPN-------SQDGLRRLDYRMKWEDDFQAYL-HKLDEKK 137

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                         +   + +             +    +
Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRKNAGFTDEEREKMTQLLSNGFIDTFRTLYPEQVTYS 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R +         IDYF++ +     L        +             SDHCP+ I
Sbjct: 198 WWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIHTEI-----------MGSDHCPVEI 246

Query: 301 DY 302
             
Sbjct: 247 IL 248


>gi|207091978|ref|ZP_03239765.1| exodeoxyribonuclease [Helicobacter pylori HPKX_438_AG0C1]
          Length = 250

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRISYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKERAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|186474192|ref|YP_001861534.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815]
 gi|184196524|gb|ACC74488.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815]
          Length = 250

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 75/288 (26%), Gaps = 56/288 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            TA+  + +R+ +WNI+     +  +               + +  + LDADIV LQE+ 
Sbjct: 13  TTAAGVRALRIATWNIHGTVGTDRFASP-----------ERIGRVIRELDADIVALQEVP 61

Query: 76  -SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +      P                       +     A+  +      ++  L    
Sbjct: 62  LGGSFAPSALPVLREMTGMDAIAGPTLDTP----ERRYGNAILSRLPICATRALDL---- 113

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            SF     R A+++ VE +G    +  +                 S      Q + L   
Sbjct: 114 -SFGTREARGALDVDVETDGPGTALRVVATHLGL-----------SARERRAQIRAL--- 158

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I     + +P ++ GD N    +                                +    
Sbjct: 159 IAAFDTARMPVLLMGDINEWFVWGPALRMLVTHFR-----------AAPAPRTFPSRLPV 207

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +D   M               +L          +  SDH P+    
Sbjct: 208 FALDRIWM----------HPVDRLLDVHVHSSMLARVASDHLPLVARI 245


>gi|85714109|ref|ZP_01045098.1| exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A]
 gi|85699235|gb|EAQ37103.1| exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A]
          Length = 271

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 74/306 (24%), Gaps = 64/306 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +   +WNIN                       L+ ++ K    D++ LQE          
Sbjct: 3   LTFTTWNIN----------------SVRLRIDLVAKFLKAQRPDVLCLQETKCP---DDA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP   +                +    +  +AV  K        +     +    +  +R
Sbjct: 44  FPLKRFRQLGYDH------VALNGQKGYHGVAVVSKLP------FDASNIRTFCDKIDSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +     G    ++  +       D  +   +P  +   Q    +K        +  
Sbjct: 92  HVSVIFGGQAGLAAPLVLHNFYVPAGGDIPDPAMNPKFAHKLQFLDEMKACAPLHPGNGD 151

Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTIDP--------------NDSLIRFPKEKDSRCNA 247
             V+ GD N   +     ++    K +                 + +             
Sbjct: 152 RHVLVGDLNVAPHENDVWSHRQLLKIVSHTPIECEKLLGVQKHGNWVDIARARIPMSEKI 211

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  + +     +         +         +R SDH P
Sbjct: 212 YTWWSYRAADWIASDRGRRLDHIWVSEALRSGIRD-------FRITRDARGWQRPSDHVP 264

Query: 298 ISIDYD 303
           ++   D
Sbjct: 265 VTAVID 270


>gi|329120764|ref|ZP_08249426.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200]
 gi|327460561|gb|EGF06897.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200]
          Length = 258

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 80/306 (26%), Gaps = 76/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS N+N +                         Y     ADIV +QE+ +  A   +
Sbjct: 2   LKIVSANVNGIRSAYKKGF---------------LDYIAASGADIVCVQELKAQEA--DL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+                   +    ++ +AV  K      Q    +   D   R    
Sbjct: 45  APEMKNPHGMYGHW------HCAEKRGYSGVAVYSKRAPDRVQVGMGVEEFDREGRF--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +   + V+ ++L S    +  +        +       LK           
Sbjct: 96  ------VRCDFGNLSVISLYLPSGSSAEERQQAKFRFLDVFYPMLADLKA-------EGR 142

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+ GD+N                         +   K I+         +        
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVINDLG-WTDIWRTLYPDHPG 201

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY ++        +                + ++ SDH P+
Sbjct: 202 YTWWSNRGQAYAKDVGWRIDYQMVTPELAAKALNAHV-----------YKDEKFSDHAPL 250

Query: 299 SIDYDF 304
            ++YD+
Sbjct: 251 VVEYDY 256


>gi|300725857|ref|ZP_07059321.1| AP endonuclease domain protein [Prevotella bryantii B14]
 gi|299776845|gb|EFI73391.1| AP endonuclease domain protein [Prevotella bryantii B14]
          Length = 352

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 85/303 (28%), Gaps = 70/303 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R++S+N+   +                     + QY K    DI+ LQE G      
Sbjct: 88  GAIRVMSYNVFLFAGWNSPGTSNG-----------ILQYIKKQHPDILCLQEAGCQEIGQ 136

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                    I+        +S   S+N     IA+  K   V           +      
Sbjct: 137 ANIDSVLDKIY----PYKQYSHHSSSNSE--TIALYSKFPIVDSVRINYPSKGN------ 184

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN------------------------TY 177
              +V   V I+   +W+++ HL++                                   
Sbjct: 185 --FSVAYRVTIDEDSVWIINNHLETTGLSQDERKGFKLMMKGEMDHHVAKSTSKLIITRL 242

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             S +  + +A  + ++I   +      ++ GDFN       ++    K ID       +
Sbjct: 243 GESSAKRAVEADAVSEFIEHHQ--HESIILCGDFNDGPISYTHHTIVKKLID------CY 294

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            +       +       + ID  +   +   F                     +LSDH P
Sbjct: 295 IESGFGPGISYHKGGFFVRIDNIMCTSDWEPFQCNV-------------DNKIKLSDHYP 341

Query: 298 ISI 300
           IS 
Sbjct: 342 ISC 344


>gi|315585908|gb|ADU40289.1| exodeoxyribonuclease III [Helicobacter pylori 35A]
          Length = 250

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQD 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|77456279|ref|YP_345784.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens
           Pf0-1]
 gi|77380282|gb|ABA71795.1| putative endonuclease/exonuclease/phosphatase family protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 292

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 85/292 (29%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +        +S+   +       D D+V L
Sbjct: 28  PADSRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHPGRSSNLQKIGNLLG--DFDLVAL 85

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE    +  +    +                  R+       +  V  +      + +PL
Sbjct: 86  QEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLRPWAIEDHPL 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G K        R A+ +      + + V+ +HL                  + S Q  +
Sbjct: 146 PGPKG-------RGAILVRFGEGPEALVVVMMHLALG-------------ARVRSMQLAY 185

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I   K      V+ GD N   +           +  +  L               +
Sbjct: 186 IRELIGGYKHQ----VLMGDMNTHASD----------LLQHSPLRDLGLLAPQLEATFPS 231

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        ++     I              SDH P++++ 
Sbjct: 232 WRPQRCLDHILLSPTLTLEKVEVLAQPI--------------SDHLPVAVEI 269


>gi|308049464|ref|YP_003913030.1| endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM
           9799]
 gi|307631654|gb|ADN75956.1| Endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM
           9799]
          Length = 401

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/371 (9%), Positives = 87/371 (23%), Gaps = 82/371 (22%)

Query: 14  VPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKR------TTSDYTLLRQYAKNLD 65
                     +++ ++N+     +             R             + +  + + 
Sbjct: 26  TSSAPFTPTTIKVATFNVSMEAGNYTPRGQQPNPDRLRELLANGDHPQIRNIAEILQRVR 85

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER---------------------------- 97
            DIV L E       ++            +++                            
Sbjct: 86  PDIVLLNEFDYIADRSRGVDAFRRHYLMVSQQGREPLDYPYAYTAPVNTGVPSPFDIDGD 145

Query: 98  -----LINHSKRDSNNDIHTAIAVRKKNVRVL----------------QQSYPLLGAKDS 136
                    +           + V  +                      Q          
Sbjct: 146 GIASGTGGDAWGYGLYPGQYGMVVLSRYPIDTEQVRQFQTFPWHRMPGAQPILNPDGTPF 205

Query: 137 FSRAGNRRAVE-------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +  A  R           + + +NG++I +L  H     F    +   + +   +   A 
Sbjct: 206 YDDATWRGLRLSSKSHWDVPINVNGEQIHLLAAHPTPPVFDGPEDRNGARNHDEIRLWAD 265

Query: 190 WL--KDWITQKK------ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-- 239
           +L   D++           +   FVI GD+N   +   +       +  +  +    +  
Sbjct: 266 YLNNADYLEDDAGQRGGLAADTRFVIVGDYNASPSEGQSRPGAINQLLNHPRVNASERPR 325

Query: 240 -------EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                    D+          +  +DY +     ++ +    F  +   E       +  
Sbjct: 326 STGGELHSPDNPNGPYHTAYWRAQVDYVLPSAFGFEPVRSGVFWPVDGLELSRLIADRNA 385

Query: 293 S-DHCPISIDY 302
           S DH  + ++ 
Sbjct: 386 SSDHRLVWMEL 396


>gi|307212268|gb|EFN88076.1| Recombination repair protein 1 [Harpegnathos saltator]
          Length = 327

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 81/313 (25%), Gaps = 78/313 (24%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           + P        +++ +WN++ +      +                  Y    DADI+ LQ
Sbjct: 64  MKPNVEGKEYNLKICTWNVSGIRAVIKKNG---------------LDYIAKEDADIIALQ 108

Query: 73  EMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           E       +      + +  ++   +   +            +A+  K   V  +     
Sbjct: 109 ETKCGKDKMPDEIKLSGYHHYFLDSKQSGY----------CGVALFCKEKPVSVK----Y 154

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           G  +S   +  R      +     + +++++++ +                +  +  + L
Sbjct: 155 GLNNSNFDSEGRI-----IAAEFPEFFMVNVYVPNAGQKLVTLPKRLEWNKIFKKYIEEL 209

Query: 192 KDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIR 236
                       P +I GD N                         D          +  
Sbjct: 210 DQ--------KKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERDGMTDFLAAGFIDT 261

Query: 237 FPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           F      +  A                  +DYF+  +     +      + +Y       
Sbjct: 262 FRLLYPDKEGAYTFWSYFANARNKDIGWRLDYFLASERIKNKICDNIIRKQVY------- 314

Query: 288 RGKRLSDHCPISI 300
                SDHCP+ +
Sbjct: 315 ----GSDHCPVIL 323


>gi|227498619|ref|ZP_03928763.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904075|gb|EEH89993.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 251

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 79/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LV+WN+N L         ++                + LDADI+ +QE          
Sbjct: 1   MKLVTWNVNGLRACMNKGFKES---------------MEKLDADIISIQETK-MQREQAS 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  ++++     +          +  A+  +   +       +   D   R    
Sbjct: 45  FDFPGYYEYWNSAVKKGY----------SGTAIFSRIKPLSVTYGLGIEEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       ++++++  +     +  +             + L            
Sbjct: 91  -----VITAEYDDFYLVNVYTPNSQRELARLSYRMAWEDAFQAYCEDL--------SKKK 137

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                   +                +  F      R  A 
Sbjct: 138 TTIVCGDMNVAHEPIDLKNPDSNHHNAGFSDEERQKLDAFLARGFVDSFRMLYPDREGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     +   +    +             SDHCP+ 
Sbjct: 198 TWWSYMFKARERNAGWRIDYFLVSEAGRDKIRDVTIMNEI-----------MGSDHCPVV 246

Query: 300 IDY 302
           ++Y
Sbjct: 247 LEY 249


>gi|145351477|ref|XP_001420103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580336|gb|ABO98396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 578

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/353 (11%), Positives = 88/353 (24%), Gaps = 64/353 (18%)

Query: 16  CTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            +    +   + ++N+  +     +      +           + +   N +ADI+ LQE
Sbjct: 209 NSTPEPRTFTVATYNVLADLYCNSDMYGYVPDWALAWAYRRQNILKEIVNYNADILCLQE 268

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL--- 130
           + S +       +     + S  +            +    A+  K  +           
Sbjct: 269 VQSDHYEDFFQGEMAKYGYASVYKKKTAQVFSEGKFVIDGCAIFFKKDKFALIKKYEVEF 328

Query: 131 ----------LGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
                     LG       A NR      A+ +++E       +L    +  C  ++  +
Sbjct: 329 NKAALSLVESLGGATQKKDALNRLMKDNIALIVVLEALDVDQQLLQGKRQLLCVANTHIH 388

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYL---------------- 218
             +    +   Q   L   + +   S   P V+ GDFN                      
Sbjct: 389 ANTEHNDVKLWQVHTLLKGLEKIATSAEIPMVVCGDFNSVPGSAAHSLLSNGRVPADHPE 448

Query: 219 ---GNNDDFWKTIDPNDSLIRFPKEK----------------------DSRCNANKNLRN 253
                      +   +  L                                   N     
Sbjct: 449 LGIDPFGILQPSTKLSHPLPLVSAYTNLHKPCLDSEALERQRDRVDVIGEPLFTNCTKDF 508

Query: 254 KIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +DY    ++A     L++      +  +       +  SDH  +  ++ +
Sbjct: 509 NGALDYVFYTEDALAPVSLLELPGEREVRAKYGGLPNTQWSSDHVCLMTEFQW 561


>gi|110638457|ref|YP_678666.1| exodeoxyribonuclease III (exonuclease III) [Cytophaga hutchinsonii
           ATCC 33406]
 gi|110281138|gb|ABG59324.1| exodeoxyribonuclease III (exonuclease III) [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 255

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 77/302 (25%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    +L ++ +    D+V LQE          
Sbjct: 1   MKIATYNVNGVNG----------------RLPVLLRWLQEARPDVVCLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +            +A+  ++  + +    L G  +      +R
Sbjct: 35  LKAPQEKFPEEAFLQAGYHAIWHGQKSWNGVAILSRSSDIRELRRVLPGDPEDNH---SR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I +  ++L +       +  Y        +  + L        E+ +
Sbjct: 92  YIEAFV-----NGIVIGCLYLPNGNPAPGPKFDYK------LKWFKRLTAHAADLIEADM 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P  + GDFN     L                     +K +          K         
Sbjct: 141 PIALIGDFNVMPTDLDVYKPESWIDDALFRPEVRAAFKKLMKQGWTDAIRKLHPDEKIYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          ID+F++       L +          D      ++ SDH P  I
Sbjct: 201 FWDYFRNAYGRNAGLRIDHFLLSPPLAAKLKKAGV-------DKHVRGWEKSSDHAPTWI 253

Query: 301 DY 302
             
Sbjct: 254 IL 255


>gi|325127357|gb|EGC50292.1| exodeoxyribonuclease III [Neisseria meningitidis N1568]
          Length = 259

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 47  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAVKALSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 VEYDY 256


>gi|320532068|ref|ZP_08032952.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320135713|gb|EFW27777.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 277

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 81/310 (26%), Gaps = 65/310 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ + N+N +                 +    + ++      DI+ LQE+ +   +A  
Sbjct: 1   MRIATVNVNGIRA---------------AARKGMGEWLTASAPDILLLQEVRADEQIAVD 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-----SYPLLGAKDSFS 138
                +       R+   +           +AVR      L +     + P     D  S
Sbjct: 46  L-LPGYEAAIWPCRIKGRAG--------VGVAVRDGGPATLGELRYGVAAPGTEEPDVDS 96

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  + L      +++ V+  +L S        +       L+      + D +   
Sbjct: 97  GRWLEADLSLTGFDGVEQLTVISAYLHSGQLGTEKMDQKYAHLELVD---ARMADLLAAA 153

Query: 199 KESLVPFVIAGDFNRKINYLGNNDD-----------------FWKTIDPNDSLIRFPKEK 241
           ++     ++AGD N   +     +                                    
Sbjct: 154 RDGGPQVLMAGDLNVVRSERDIKNWKPNHNKIAGVMDEEIAHLEGWFASGWVDASRHLVG 213

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           D           +           IDY V+     +     +        D       R 
Sbjct: 214 DEEQGPYTWWSQRGKAFDNNAGWRIDYQVLTPALAERARSVTV-------DRAPDYASRW 266

Query: 293 SDHCPISIDY 302
           SDH P+ ++Y
Sbjct: 267 SDHAPLVVEY 276


>gi|228913758|ref|ZP_04077383.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228845697|gb|EEM90723.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 190

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 15/168 (8%)

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWIT- 196
            R+ +       G+ + V+  HL S     +           S     Q AQ + +++  
Sbjct: 27  TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPFGKVQPLVLKSEEKRVQLAQEVNNFVQG 86

Query: 197 -QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            QKK +  P V+ GD N             KT++  +                 +  N  
Sbjct: 87  IQKKNTNAPVVVLGDMNDFEFAKP-----LKTLEGTNLKNMLNTVPKENRYTYIHEGNAQ 141

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +D+ ++  N        +  + ++   +I     R+SDH P+    D
Sbjct: 142 VLDHILVTNNIA----PHTIVDPVHLNTNIMKEHGRVSDHDPVLAQID 185


>gi|213691818|ref|YP_002322404.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213523279|gb|ACJ52026.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457912|dbj|BAJ68533.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 286

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 80/311 (25%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81
            + + + N+N +                 +    +  +A     D+  +QE+ +    V 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCIQEVRAPQDDVD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +    + +     +               + +      + ++      ++D  
Sbjct: 47  SIFDEFGFEYATAGKIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  I V  +++ +    D            L    + +     +
Sbjct: 107 S---GRWIETDVKTPEGYAITVASVYVHAGNTDD--PTKMEQKYRFLDTMLKRMGALRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +D  + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +       +   +  D   +  KR 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDKRW 274

Query: 293 SDHCPISIDYD 303
           SDH P++I Y+
Sbjct: 275 SDHAPLTITYE 285


>gi|208435390|ref|YP_002267056.1| exodeoxyribonuclease [Helicobacter pylori G27]
 gi|208433319|gb|ACI28190.1| exodeoxyribonuclease [Helicobacter pylori G27]
          Length = 250

 Score = 79.2 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|326381939|ref|ZP_08203632.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395]
 gi|326199365|gb|EGD56546.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395]
          Length = 281

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 81/307 (26%), Gaps = 52/307 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
                 + + N+N +              R+  +  +L  + +    D+V +QE+ + +A
Sbjct: 2   STSAFSVTTINVNGIRA--------AVKHRSEENLGML-PWLETAAPDVVLMQEVRASDA 52

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +A+   +      +      + +           + +  +      +        D   R
Sbjct: 53  LARKALQPALDAGWHFVHTESEA------KGRAGVGILSRQQPSAVRIGFGSEEFDVAGR 106

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                 +E   +I+G  +    ++L +   L   E         L          + +  
Sbjct: 107 Y-----IEADFDIDGDTVTAASLYLPTGAALTENEKDVEKYEEKLRF-LTAFGPHLDKLL 160

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSR 244
            S    V+AGD+N   +     +                    +     +          
Sbjct: 161 GSGGLAVVAGDWNIAPDERDIKNWKGNVKNAGFLPHEREWVAGLLEAGWVDLARAHHGDV 220

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY +      +   +          D   +   R SDH
Sbjct: 221 AGPYAWWSWRGKAFDNDAGWRIDYHLATPALAERAQRTWV-------DRADAYHLRWSDH 273

Query: 296 CPISIDY 302
            P++  +
Sbjct: 274 APVTAVF 280


>gi|269213939|ref|ZP_05983198.2| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685]
 gi|269144958|gb|EEZ71376.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685]
          Length = 274

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 17  LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 61

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 62  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRAP----DNVQIGMGIEEFDREGR 109

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  K+ V+ ++L S    +  +        +     + +       K    
Sbjct: 110 F-----VRCDFGKLSVISLYLPSGSSAEERQQVKYRFLDVFYPMLEAM-------KNEGR 157

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 158 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDNPGY 217

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 218 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 266

Query: 300 IDYDF 304
           ++YD+
Sbjct: 267 VEYDY 271


>gi|332864503|ref|XP_001169567.2| PREDICTED: endonuclease/exonuclease/phosphatase family
           domain-containing protein 1 isoform 2 [Pan troglodytes]
          Length = 569

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 77/296 (26%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130
             +       +  +                         +            +       
Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +   L S   + + S          
Sbjct: 372 SSPSNGHGKPAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +    +      I   +              + KN
Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  + 
Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538


>gi|238650992|ref|YP_002916848.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic]
 gi|238625090|gb|ACR47796.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic]
          Length = 260

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +   LLR +    + DI+ LQE+    A    
Sbjct: 1   MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    +++     R
Sbjct: 41  ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + +      ++ ++  +  F+ S +     +            ++++ KK    
Sbjct: 91  F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN     +                      +TI  +     +     S+    
Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKLRTILNSGFEDLYRLMHPSKQE-F 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L            D      ++ SDH P+ 
Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255

Query: 300 IDY 302
             +
Sbjct: 256 ASF 258


>gi|15965006|ref|NP_385359.1| hypothetical protein SMc01813 [Sinorhizobium meliloti 1021]
 gi|307301078|ref|ZP_07580847.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti
           BL225C]
 gi|15074185|emb|CAC45832.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306904033|gb|EFN34619.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti
           BL225C]
          Length = 285

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 78/283 (27%), Gaps = 53/283 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAV 80
             + + S+NI+     +G             D   + Q    + ADIV LQE        
Sbjct: 33  GDIVIASYNIHKCVGTDGRF-----------DPPRIAQVIAEIGADIVALQEADQRFGER 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A +              +      +  +  H  + + ++      +   L G        
Sbjct: 82  AGLLDLEHLRREAHLVSVPISPFSEKGHGWHGNVLLIREGAVSDVRQLKLPG-------V 134

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+ + +++    + V+  HL                    ++QA+ L         
Sbjct: 135 EPRGALVVDLDLKAGPLRVIAAHLGLLRHS-------------RARQAETLLK--ATADG 179

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           +  P ++ GD N         +           L        S   +  +    +P+D  
Sbjct: 180 AGRPTLLIGDLN---------EWRMGKRSSLSFLSPIFDPSHSAVASFPSRFPLLPLDRV 230

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + + +     +                  +  SDH P+    D
Sbjct: 231 LGNPHHLVTSVAV----------HDTPLARVASDHLPVKASID 263


>gi|330814067|ref|YP_004358306.1| exodeoxyribonuclease III [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487162|gb|AEA81567.1| exodeoxyribonuclease III [Candidatus Pelagibacter sp. IMCC9063]
          Length = 247

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 79/276 (28%), Gaps = 53/276 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                 ++ Y K  + D++ LQE+ + +              +   + I +         
Sbjct: 2   RIRVNQVKDYLKKKEIDVLVLQEIKTED----------KNFPHEDFKKIGYHSYSFGQKS 51

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           +  +A+  K      +   +  ++       +R  +   V  N KK  ++ I+L +   +
Sbjct: 52  YNGVAIISK------EELKVTTSEFKDPLGQSR-CIAAEVSHNDKKFLLVSIYLPNGNPI 104

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------YLGNNDD 223
           ++ +  Y              + +I  K +     +I GDFN   +           ND 
Sbjct: 105 NTEKYDYKKK------WMDVFEKYIVGKFKKNKNIIITGDFNVIPSEEDVGNPEDWTNDA 158

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNKI---------PIDYFVMDQNAY 267
            +K                                  +           ID++++  +  
Sbjct: 159 LFKLEIRKKFRSLLNLGFKDGFRLFNKEPKEYTFWDYQQGSWQRNKGLRIDHYLVSDSMI 218

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + L            D      +R SDH PI     
Sbjct: 219 QDLK-------TIEIDKFTRDNERPSDHVPIRCVLT 247


>gi|323144610|ref|ZP_08079198.1| exodeoxyribonuclease III [Succinatimonas hippei YIT 12066]
 gi|322415619|gb|EFY06365.1| exodeoxyribonuclease III [Succinatimonas hippei YIT 12066]
          Length = 268

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 82/311 (26%), Gaps = 73/311 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80
            ++L SWN+N +        W               ++  +   D++ LQE  +      
Sbjct: 2   DIKLASWNVNGIRAVSAKEDW---------------KWFSDCGYDVISLQETKASVEQMP 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +     +  ++++               ++  AV  K   +       +   D   + 
Sbjct: 47  ESITDPVGYHAYFAS---------SIVKKGYSGTAVFSKKEPLS----HEIELPDPEFQG 93

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLSQQAQWLKDWIT--Q 197
             R      V +  +K    + +  +            +     +  +  +   +    Q
Sbjct: 94  EGRI-----VHLEFEKFHFFNGYFPNGGADILDESGKPTGEFKRVPYKMAFFDSFFKYAQ 148

Query: 198 KKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
           K     P V+ GDFN   N                L     F         +  F     
Sbjct: 149 KLRESKPIVVCGDFNIAHNEIDLARPKTNVKNTGFLPLERAFLDKFVAAGYIDTFRFVHG 208

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       K           IDYF + +   + +        ++            S
Sbjct: 209 DLKDQYTWWSYKTRARAKNVGWRIDYFFVSEELKENIKDAWIENDVF-----------GS 257

Query: 294 DHCPISIDYDF 304
           DHCPI +   F
Sbjct: 258 DHCPIGLCLSF 268


>gi|152986913|ref|YP_001348510.1| hypothetical protein PSPA7_3150 [Pseudomonas aeruginosa PA7]
 gi|150962071|gb|ABR84096.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 245

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 86/256 (33%), Gaps = 43/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVF-----PKNTWCIFY-STERLINHSKRDSN 107
              LR+  +++ AD+VFLQE+   +++         P   +     S      + +    
Sbjct: 26  LPELREAVRSVGADLVFLQEVLGSHSLHAARLPAWPPAPQYEYLADSMWPQFAYGRNAVY 85

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            + H   A+  K+  +  ++  +  A +       R  +  +++I G+ +  + +HL   
Sbjct: 86  PEGHHGNALLSKHPILDHRNLDVSVAGN-----EERGLLHAVIDI-GRPLHAVCVHLGLR 139

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         +   +Q Q L + +        P V+AGDFN             + 
Sbjct: 140 -------------EAQRQRQLQLLCELV-TGLPEREPVVVAGDFNDWRQRAD------RL 179

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +        F   +     +       +P+D   +     +     S           + 
Sbjct: 180 LAGCGLREVFVGAEGRPARSFPARWPLLPLDRIYLRNARGRQPRILS-----------RR 228

Query: 288 RGKRLSDHCPISIDYD 303
               LSDH P++++ +
Sbjct: 229 PWSHLSDHLPLAVEVE 244


>gi|311895579|dbj|BAJ27987.1| hypothetical protein KSE_21650 [Kitasatospora setae KM-6054]
          Length = 252

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 78/285 (27%), Gaps = 52/285 (18%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              A++VR++S+N+ +L                  D   + +  +    D+V +QE   Y
Sbjct: 15  PGGARRVRVLSYNVRSL----------------RDDRAAVARVIRACAPDVVCVQESPRY 58

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               K      W    +   ++    R +   +        +   +  +   L   +   
Sbjct: 59  WKTEKAAA---WLAHKTGMVILAGGGRVAAGPLLLGNL---RVDVLELRDALLPKTRGLH 112

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           +R      + +      +   V   HL                 +   +Q   L+  +  
Sbjct: 113 ARGFASALLRI---GGSRPFSVTSCHLSLEP-------------AERLRQFDLLRGQLR- 155

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P VIAGDFN   +  G      +  D +                +        I
Sbjct: 156 ---PGEPGVIAGDFNEGPDGPGWRSLAAELTDAHAKAPW------GGTYTSVPEEPYQRI 206

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D      +         +      E D+    +  +DH P+    
Sbjct: 207 DGVFATPDVEVLGCGVPYPLPGVAEADL----RAATDHLPVLAAL 247


>gi|229095675|ref|ZP_04226655.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
 gi|228687708|gb|EEL41606.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
          Length = 190

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 16/190 (8%)

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS- 178
             ++L ++   +G +++   +  R+ +       G+ + V+  HL S     +       
Sbjct: 6   VPKLLDKNVIRIGDENALFDS-TRKPLAAEFTFQGQNVVVVANHLNSKLGDATPFGKVQP 64

Query: 179 ---PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
               S     Q AQ +  ++   QKK +  P V+ GD N             K ++    
Sbjct: 65  LVLKSEEKRIQLAQEVNYFVQGIQKKNANAPVVVLGDMNDFEFSKP-----LKALEGTIL 119

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                           +  N   +D+ ++  N        +  + ++   +I     R+S
Sbjct: 120 KDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTVVDPVHLNSNIMKEHGRVS 175

Query: 294 DHCPISIDYD 303
           DH P+    D
Sbjct: 176 DHDPVLAQID 185


>gi|116511761|ref|YP_808977.1| metal-dependent hydrolase [Lactococcus lactis subsp. cremoris SK11]
 gi|116107415|gb|ABJ72555.1| Metal-dependent hydrolase [Lactococcus lactis subsp. cremoris SK11]
          Length = 352

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 85/316 (26%), Gaps = 55/316 (17%)

Query: 21  AQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +  +++++NI               G  +   S     S      +  K  + D   +Q
Sbjct: 56  GKTYKMMTFNIGYGSYPPSFNFFMDGGDDVHAYSKSAVKSAIQEDIRLIKKENPDFGNIQ 115

Query: 73  EMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRDSNNDI---HTAIAVRKKNV 121
           E+      ++   +          +    +      +        I    + I    K  
Sbjct: 116 EIDWQGDRSQQVNEPQLVRAGLPDYSSVLTQNYDSAYLFYPVTKPIGKAKSGIMTYSKYE 175

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 Y L    +        RA  +    ++ + KK  + + HL +F           
Sbjct: 176 IENSTRYKLPIETNFNKFFDLDRAFSVSLLPIKNSDKKFVIFNTHLSAFITDQ------- 228

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----------KTI 228
               +  QQ   L D + +        +   D+N  +    + +  W          K +
Sbjct: 229 ---KIQKQQLVTLFDAMKKYVNKGDYVICGADYNHALAGKAHPELTWMKEFPTENLTKGM 285

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                               KN +N    ID F++  N     IQ               
Sbjct: 286 RVVAPTNAPTVRSLDFAYHQKNPKNTFGIIDGFLVSNNIKDLKIQ------------TID 333

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+ +D+ 
Sbjct: 334 NQFKSSDHQPVLMDFS 349


>gi|315652833|ref|ZP_07905807.1| exodeoxyribonuclease III [Eubacterium saburreum DSM 3986]
 gi|315485035|gb|EFU75443.1| exodeoxyribonuclease III [Eubacterium saburreum DSM 3986]
          Length = 259

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++SWN+N L                         + +++DADI  +QE        ++ 
Sbjct: 10  KMISWNVNGLRAAVTKGF---------------LDFFRDIDADIFCIQESKLSEGQIELD 54

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +                  ++ +AV  K+  +       +   D+  R     
Sbjct: 55  LPGYYDYWNYAT-----------KKGYSGVAVFTKDKPINVTYGIGIDEHDNEGR----- 98

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++     + +++  +  +     +  +            A  L++          P
Sbjct: 99  ----VITAEYDEFYLITCYTPNSQRGLTRLDYRMTWEDAFLDYALKLEE--------KKP 146

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +  GD N                              I  +  +  F      + +A  
Sbjct: 147 VIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKMDIILSSGFVDSFRLLYPDKTDAYS 206

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDYF++       + +      +             SDHCP+ +
Sbjct: 207 WWSYMGGARAKNVGWRIDYFIVSAKLKDRIKEAKIHSEVL-----------GSDHCPVEL 255

Query: 301 DYD 303
           D +
Sbjct: 256 DIE 258


>gi|301167794|emb|CBW27378.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 365

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/383 (9%), Positives = 100/383 (26%), Gaps = 98/383 (25%)

Query: 2   IRKYVLAL-VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS-------------- 46
           ++  ++++ +F  +PC   + + + ++S+N+  L +        +               
Sbjct: 1   MKSLLISMAIFISLPC---LGKTIEIMSYNVENLFDIVHDEGKNDWTFLPTKTKGKKEAC 57

Query: 47  ------------------VKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYNAVAKVFPK 86
                                       + +  +       I+ L E+ +   ++++   
Sbjct: 58  DKVKSSYRKKECHETDWAKDNLEVKIENITKMVRRDGKLPAILALSEIENERVISQLAKF 117

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             +  F  ++             I  A+   +            +   + F    +R  +
Sbjct: 118 IGYKKFAVSDSPDKRG-------IDLAVLWNETEDVKFLSKKEHVLKGEYFKDRPSRNIL 170

Query: 147 ELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           E+  +I  K+ + V   H  S             +   L+++ + +       K      
Sbjct: 171 EVEFQIGKKEKLTVFVNHWPSLSNPTE---ARIIAAKTLAKRTKEILK-----KNKNQNI 222

Query: 206 VIAGDFN-------RKINYLGNNDDFWKTI-----DPNDSLIRFPKEKDSRCNANKNLRN 253
           +  GDFN            +   DD +K +                +             
Sbjct: 223 MAMGDFNTIDENYPHPFKSVLYKDDLYKDLHTTFKKDKSISYNVKDQMAPGSYFYGRGMT 282

Query: 254 KIPIDYFVMDQNAY------------------------------KFLIQESFSEILYNED 283
              +D      N                                K+L   +     +  +
Sbjct: 283 WNLLDRIFFTNNLTNNSGLEIDIASYQIYAPSFATRTYEYRSKGKYLYGSTIKGTPFRYE 342

Query: 284 DIKSRGKRL--SDHCPISIDYDF 304
              +  +R   SDH P+ ++  +
Sbjct: 343 HNSTSNRRAGYSDHFPLIVNLKY 365


>gi|187251652|ref|YP_001876134.1| exodeoxyribonuclease III Xth [Elusimicrobium minutum Pei191]
 gi|186971812|gb|ACC98797.1| Exodeoxyribonuclease III Xth [Elusimicrobium minutum Pei191]
          Length = 255

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 76/305 (24%), Gaps = 80/305 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83
           R +SWN+N L                        ++      DI+ LQE   S   +   
Sbjct: 4   RFISWNVNGLRAVAKKGFM---------------EWFTKESPDILALQETKASPEQLEGG 48

Query: 84  FPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++ST     +          + +AV  K   +           D   R   
Sbjct: 49  LKNPIGYHSYFSTAERKGY----------SGVAVYSKEEPLSVSESIGNSTMDGEGR--- 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  + +  K  + ++I+  +    +          +   +  Q L           
Sbjct: 96  ------TLVLEFKNFYFINIYFPNGGQGEHRIEYKLRFYNEFLKLTQKLMK--------Q 141

Query: 203 VPFVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++ GD N                          +      N     F        + 
Sbjct: 142 KTVIVCGDVNTAHKETDLARPKENEGNTGFLPKERAWLDKFFENGLTDTFRLFTKDGGH- 200

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 K           IDYF++D  +   +                    + SDHCPI
Sbjct: 201 YTWWDYKTKARERNVGWRIDYFMIDTLSKNKVKNS-----------YMLPEVQGSDHCPI 249

Query: 299 SIDYD 303
           +++ +
Sbjct: 250 ALEIN 254


>gi|152002660|dbj|BAF73613.1| sphingomyelinase C [Streptomyces griseocarneus]
          Length = 339

 Score = 79.2 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 84/299 (28%), Gaps = 33/299 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++++N   +S      L+ N  +   +       + +    D+V LQE     A   
Sbjct: 50  SLKVLTYNTFLMST----GLYPNWGQEHRAREIAAAGFFQGN--DVVVLQEAFDNAAADG 103

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLGAK 134
           +         Y T  +                       + V  K   V ++      A 
Sbjct: 104 LKAAAADRYPYQTPVVGRSRDGWDATGGKYSATTPEDGGVTVLSKWPIVRKEQVIFNDAC 163

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            +   + N+    +++ + G ++ V+  H +S             + +  S+Q + +  +
Sbjct: 164 GADWWS-NKGFAYVVLNVGGTRVHVVGTHAQS----TDSGCAAGEAAADRSRQFRQIDAF 218

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPNDSLIRFPKEKDSRCNA 247
           +      +    ++AGD N   +                            KE       
Sbjct: 219 LDAKNIPADEQVMLAGDLNVDSHSAEYASMLADGDLAPADSRAGHPYSFDTKENSIAAYR 278

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPISI 300
                 +  +DY +      +     +      +     S   +      LS H P+  
Sbjct: 279 YPT-DPREDLDYVLHRNGHARPAGWRNTVVQETSAPWTVSSWGKRYTYTDLSGHYPVIA 336


>gi|262067673|ref|ZP_06027285.1| DNAse I protein DHP2 [Fusobacterium periodonticum ATCC 33693]
 gi|291378397|gb|EFE85915.1| DNAse I protein DHP2 [Fusobacterium periodonticum ATCC 33693]
          Length = 286

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 90/297 (30%), Gaps = 35/297 (11%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            L+ F +  T S A++  + S+NI  L                  D     +  +    D
Sbjct: 18  ILMIFTMFSTMSSAEEAYIASFNILRLGA-------------AEKDMVQTAKLLQGF--D 62

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQ 126
           +V L E+ +   +  +  +       + +  I+     S+    +     +K  V+ ++ 
Sbjct: 63  LVGLVEVINKEGIEDLVDELNRQSPNTWDYHISPFGVGSSKYKEYFGYVYKKDKVKFVKS 122

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                  K S      R       +I+     ++ +H                     + 
Sbjct: 123 EGFYKDGKSSL----LREPYGATFKIDNFDFTLVLVHTIYG--------NNESQRKAENF 170

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           +   + D+   K       +IAGDFN       +    +K  D     I    +      
Sbjct: 171 KMVEVYDYFQDKDRKENDILIAGDFNL-YALDESFRPMYKHKDKITYAIDPAIKTTIGTK 229

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              N       D F   Q         S   + ++E D +   K +SDH P+ I  +
Sbjct: 230 GRANSY-----DNFFFSQKYTTEFTGSS-GALDFSEKDPQLMRKIISDHIPVFIVVE 280


>gi|167762608|ref|ZP_02434735.1| hypothetical protein BACSTE_00964 [Bacteroides stercoris ATCC
           43183]
 gi|167699714|gb|EDS16293.1| hypothetical protein BACSTE_00964 [Bacteroides stercoris ATCC
           43183]
          Length = 378

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/341 (9%), Positives = 81/341 (23%), Gaps = 57/341 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46
           M +  V    +F      +   +     +  +N+  L +    +   +           +
Sbjct: 37  MRKLIVFFSFWFSATIVVAQNTERKLYSIAFYNLENLFDTIHDAGKNDYDFLPDGSYRWT 96

Query: 47  VKRTTSDYTLLRQYAKNL-------DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
            K+  +    L      L          ++ + E+ ++  +  +  +     +       
Sbjct: 97  AKKYEAKLHNLSDVLSALSRNLVPEGPAVIGVAEVENHRVLTDLVSQPAMANYKFVHYEG 156

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                     I  A+    +   V      L    +  +    R  + +   + G+++  
Sbjct: 157 P-----DRRGIDCALLYDPQQFAVTNSKLVLSAPFEGDTVHLTRGFLIVDGRMAGERVCF 211

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S           SP     ++Q + L D +   ++  +   + GD N       
Sbjct: 212 IVNHWPSR-------GAKSPVRVHAARQVKALTDSL-MHEDKKLKLFVMGDMNDDPMDES 263

Query: 220 N-----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                                 +   +D               D  V+ +   K      
Sbjct: 264 MQTLGARKYISGMKANQFFNPWWEILEDKGVGTLLYRGKWNLFDQIVLSRPLVKAKKGLR 323

Query: 275 FSE------------------ILYNEDDIKSRGKRLSDHCP 297
           +                            +      SDH P
Sbjct: 324 YDHSEVFIRDYLIQQDGKYKGSPLRTHGGRVWLNGYSDHLP 364


>gi|114612832|ref|XP_527721.2| PREDICTED: similar to KIAA1706 protein isoform 4 [Pan troglodytes]
 gi|114612836|ref|XP_001169584.1| PREDICTED: similar to KIAA1706 protein isoform 3 [Pan troglodytes]
          Length = 569

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 77/296 (26%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130
             +       +  +                         +            +       
Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +   L S   + + S          
Sbjct: 372 SSPGNGHGKPAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +    +      I   +              + KN
Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  + 
Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538


>gi|223278400|ref|NP_788782.2| DNA-(apurinic or apyrimidinic site) lyase [Bos taurus]
 gi|113912167|gb|AAI22611.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Bos taurus]
 gi|296483354|gb|DAA25469.1| DNA-(apurinic or apyrimidinic site) lyase [Bos taurus]
          Length = 318

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 77/311 (24%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPVELQELSGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EYDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++ Q+    L                   
Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPALCDSKIRSKAL--------- 305

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 306 --GSDHCPITL 314


>gi|325293378|ref|YP_004279242.1| hypothetical protein AGROH133_07235 [Agrobacterium sp. H13-3]
 gi|325061231|gb|ADY64922.1| hypothetical protein AGROH133_07235 [Agrobacterium sp. H13-3]
          Length = 369

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 47/366 (12%), Positives = 95/366 (25%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTS----DYTLLRQYAKNLDADIV--------- 69
            +RL ++NI  L  +   + ++N  +R  +    D      Y     A  V         
Sbjct: 2   SLRLATFNIENLLTRFDFTGFRNQTRRDRAIQLFDIRDEATYQALESARAVSSTDDTRQL 61

Query: 70  -------------FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                         LQE+ +  A+        + +  +        + + +  I  A+ +
Sbjct: 62  SALAIADADADILCLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGNDSRGIDVAVVM 121

Query: 117 RK------KNVRVLQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKI 157
           R+      K   +  +S+  L  ++                +   R  +E+ + + GK +
Sbjct: 122 REQTRDGDKIEVIDIKSHAALTYRNLDLFNPALAATNQIDDKIFKRDCLEIDLRVGGKPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT----QKKESLVPFVIAGDFNR 213
            +   H KS        +    +  +   +A  ++  I             F I GD N 
Sbjct: 182 TLYVTHFKSMTNARDAIDARLATMPIREAEAMAVRRIIENRWGANNTRNKNFAICGDMND 241

Query: 214 KINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255
                                            +       +          + R     
Sbjct: 242 YQERISISGDRRSGYSFTPVEEERSALDIFTADDFVTNPMSRRDVMDRWTLYHSRGPQEQ 301

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEILY------------NEDDIKSRGK---RLSDHCP 297
               +DY  +  +            I                D     G    + SDHCP
Sbjct: 302 HLCQLDYIWLSPHLAHINATRVPEIIRAGQPYRTVFPPGQEVDRYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 VVMTLD 367


>gi|153805804|ref|ZP_01958472.1| hypothetical protein BACCAC_00041 [Bacteroides caccae ATCC 43185]
 gi|149130481|gb|EDM21687.1| hypothetical protein BACCAC_00041 [Bacteroides caccae ATCC 43185]
          Length = 368

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 67/305 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+   S  E                  +  Y  N  ADI+ LQE  +     
Sbjct: 106 GSIKILSYNVMNFSNLEKKDGKNP-----------ILSYLVNSKADIICLQEYNAAQNKK 154

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +      +        +  S+      +A   K   +           +      
Sbjct: 155 YLTEADIKKALKAYPYYSVRRQNRSD----VQLACFSKYPILSVSPIDYESTYN------ 204

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
              +V+ ++ +N   + +++ HL+S          Y                        
Sbjct: 205 --GSVKYVLAVNNDTVTLINNHLESNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLVKKLA 262

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ + QA  +   IT+ K      +  GDFN   +    +    + +D       F 
Sbjct: 263 EASAIRASQADSVNKAITESKYPT--IIACGDFNDG-SISYTHRILTQKLDD-----AFT 314

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  N   +             +    R  + SDH PI
Sbjct: 315 QSGKGLGISYNQNKFYFRIDNILISPNLKAY-------------NCTVDRSIKASDHYPI 361

Query: 299 SIDYD 303
                
Sbjct: 362 WCHIS 366


>gi|325189192|emb|CCA23715.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 283

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/293 (9%), Positives = 77/293 (26%), Gaps = 26/293 (8%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +  ++      A +  ++S+N+ T +  +    W +           L+ + +  + D +
Sbjct: 6   LLLILSAPTLTALEFSVISYNVRTSNAPDVSYPWTDRK-------QQLQPFIEAENPDFI 58

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             QE                           +           +     +          
Sbjct: 59  GTQEASPEQFEFFQQALGDTYGITGECAGECYENERPFLMYKKSEWNSLEFGSFALSDRQ 118

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            +   ++++    R       +     I +   +         LE++            +
Sbjct: 119 EIRGSNTWNLEYKRSVSWQRFQHKSNSISICLFNTHFDMTKGHLESS------------K 166

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +    ++  +S   F++ GD N  +     +      +        +            
Sbjct: 167 LIVQERSKICKSFDFFILTGDLNANLQDDAIHYLKGIPLISTLQQCGYQGGTFIGPGVFT 226

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +    DY  +  N       E+   I  +  D +  G+ ++DH  +   +
Sbjct: 227 GPLSSAVFDYIFIQPN-------ENIRIIGSSIIDSRRNGQAITDHAIVKTTF 272


>gi|302340168|ref|YP_003805374.1| endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM
           11293]
 gi|301637353|gb|ADK82780.1| Endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM
           11293]
          Length = 363

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 46/364 (12%), Positives = 89/364 (24%), Gaps = 83/364 (22%)

Query: 5   YVLALVFFLVPCTASV-------AQKVRLVSWNINT-LSEQEGVSLWKNSVK-------R 49
           +V A+  FL  CT            ++ L+SWN+      ++  + +             
Sbjct: 14  FVFAMAVFLSSCTGCSWPTESRRDDRISLMSWNVQNVFDARDDGTEYPEFDPASGWGLGD 73

Query: 50  TTSDYTLLRQYAKNL---DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                  L +  +      AD+V L E+     +  +       + Y        + + +
Sbjct: 74  YRGRLASLSEVIRLAVPGGADVVMLMEIEHGGVLDDLANDYVQGLGYDYWA----ASQGA 129

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
           ++ +   I  R    +   +S  L  +                    G+ +++   H KS
Sbjct: 130 DSAVQLGILSRFPIRKARSRSIHLPSSPSLRPIFEVELE-----MEEGEPLFLFVCHWKS 184

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------- 219
                        +       A  ++  I +        ++ GD N   N          
Sbjct: 185 KSGGAEDTEPLRIAS------ASLVRKRIQEL--EGRQVIVVGDLNEAWNEWDLVGGAYQ 236

Query: 220 -----------------------NNDDFWKTIDPND------SLIRFPKEKDSRCN-ANK 249
                                    +  W + D  D       L  +       CN +  
Sbjct: 237 TALLPVSAKRQSGELENGGVLFDEAEGLWISGDREDAGADGCGLPLYTPWPSCDCNGSYY 296

Query: 250 NLRNKIPIDYFVMD-----------QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  ID+ +              +           E           G   SDH PI
Sbjct: 297 YRGGWEGIDHMLFSAALVDGRGIDLDSFSVAAEAPWCDEDGIPVSYRMRDGYGYSDHLPI 356

Query: 299 SIDY 302
               
Sbjct: 357 VATL 360


>gi|160891549|ref|ZP_02072552.1| hypothetical protein BACUNI_04001 [Bacteroides uniformis ATCC 8492]
 gi|156858956|gb|EDO52387.1| hypothetical protein BACUNI_04001 [Bacteroides uniformis ATCC 8492]
          Length = 366

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 64/301 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++L+S+NI                         +  Y K   ADI+ LQE  +  +   
Sbjct: 101 SIKLLSYNIMGFDGAAKQDGKNP-----------ILTYLKESGADILCLQEYSTVQSSKH 149

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  K+      +      ++   S       IA   K   +  +                
Sbjct: 150 LSQKDVERELKAYPYHRINT-VGSGKGHTNKIACYSKFPILSSRILDYPS--------EY 200

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYSP 179
             +V   ++I    + +++ HL+S     +                            + 
Sbjct: 201 NGSVLYEIKIEEDTVTLINNHLESNKLTKADKVVYEDMLKSPEKEKVKSGARLLIRKLAE 260

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           + ++ + QA  +   I          ++ GDFN        +    + +D       F +
Sbjct: 261 ASAIRAPQADTIAHEIA--ASPHPYIIVCGDFNDTPISYA-HRTIAQDLDD-----AFTQ 312

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  +    R    ID  +  +N   +             +    R  + SDH PI 
Sbjct: 313 SGRGLGISYNQNRFYFRIDNILTSKNLRAY-------------NCTVDRSIKESDHYPIW 359

Query: 300 I 300
            
Sbjct: 360 C 360


>gi|148979192|ref|ZP_01815371.1| extracellular nuclease-related protein [Vibrionales bacterium
           SWAT-3]
 gi|145961950|gb|EDK27240.1| extracellular nuclease-related protein [Vibrionales bacterium
           SWAT-3]
          Length = 733

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 48/372 (12%), Positives = 102/372 (27%), Gaps = 91/372 (24%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73
             +R+ ++N+ N  +   G    ++   R  +           +      LDADI+ L E
Sbjct: 338 GDLRIATFNVLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLME 397

Query: 74  MGSY-----NAVAKVFPK---------NTWCIFYSTERLINHSKRDSNND---IHTAIAV 116
           + +      +A+ ++  +         + +            +    +     I T +  
Sbjct: 398 IENNGFGEGSAIQQLVNQLNDRIEHKKDRYTFVAVDSNEDGVTDEMDSIGTDVITTGVIY 457

Query: 117 RKKNVRVLQQSY------------PLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162
           RKK V++                    G      +   R ++    ++ G  +K  V   
Sbjct: 458 RKKVVKLKDSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVKGTKEKQTVAIN 517

Query: 163 HLKS--------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------ 202
           H KS                      +      +     A  L + +   K         
Sbjct: 518 HFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDM 577

Query: 203 ------VPFVIAGDF-------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  P ++  D+             N  IN +    D    I  N   I    +K  
Sbjct: 578 NSYGMEDPMLVLTDYSEEKYGKQIKAARNTYINGVEQFGDNGAVIAKNYGYINAVAQKHP 637

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290
              +         +D+ ++ ++    ++  +   I   E  +    +             
Sbjct: 638 DSWSYSYNDEVGALDHLLVSESLKDMVVDATDWHINGGESTLFDYNEEYKGDLAKYQDHF 697

Query: 291 RLSDHCPISIDY 302
           R SDH P  ++ 
Sbjct: 698 RSSDHDPAVLEL 709


>gi|315637812|ref|ZP_07893002.1| exodeoxyribonuclease III [Campylobacter upsaliensis JV21]
 gi|315482053|gb|EFU72667.1| exodeoxyribonuclease III [Campylobacter upsaliensis JV21]
          Length = 252

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 79/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNIN L                        ++ +    D +  QE+    A    
Sbjct: 1   MKLLSWNINGLRAICDKGG---------------LEWLREEKIDFIGFQEI---KASEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +          ++        + F     R
Sbjct: 43  FPKKIYEFPFKHMYFNSAKRA-----GYSGVMSLCNFESETKK-------CEFFDDDEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E     I + +I+  +               +   +       ++ +  +   
Sbjct: 91  -----VLEHRFNNIVLFNIYFPNG-------QKDEIRLNHKMKFYADFLVYLNKLLKEGK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EVIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLALGFIDTFREINGDIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKSKLKNAFIKDDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IELD 251


>gi|170051904|ref|XP_001861978.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167872934|gb|EDS36317.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 340

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 76/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V++ SWN+  L                        ++ ++   DI+ LQE          
Sbjct: 88  VKISSWNVAGLRSWVEKGC---------------LEFLEHEAPDILCLQETKCTED---- 128

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      H         +  +A+  K +            +D   R    
Sbjct: 129 -----QLPEEARHIKGYHPYWLCKPGGYAGVAIYSKKMPFNVSYGLGDAEQDEDGRL--- 180

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +    +K +++ +++ +                   Q  + L        ++  
Sbjct: 181 ------LTAEYEKFYLVCVYVPNAGRKLVTLPKRMRWDEKFLQYLRDL--------DAKK 226

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                   D    +  +  +  F +    +  A 
Sbjct: 227 PVILCGDMNVAHAEIDLANPKTNKKNAGFTQEERDGMTNLLSHGFVDTFRQRYPEQKAAY 286

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            +DYF+  +     ++                 G   SDHCPI+
Sbjct: 287 TFWTYMGNARAKNVGWRLDYFIASERLAGRVVDSVIR-----------PGVYGSDHCPIT 335

Query: 300 IDYD 303
           +  +
Sbjct: 336 LLLN 339


>gi|126347700|emb|CAJ89415.1| putative endonuclease/exonuclease/phosphatase family protein
           [Streptomyces ambofaciens ATCC 23877]
          Length = 305

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 78/285 (27%), Gaps = 59/285 (20%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
           R+++WN+            +++V R                  ++ +QE  +    A+ +
Sbjct: 72  RVMTWNLCN-------PCEESNVHR--------AAEIAAFAPQVLGVQEACVRDVEAIRE 116

Query: 83  VFPKNTWCIFYSTERL----INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                   +++    +     +       N      A+          S           
Sbjct: 117 HLENLHGLVYHVEYGMVLNKRSRCGGAPWNPGGFGQAILSAAPMTDHVSVEYPEGG---- 172

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            + +R  + +  E+ G+ + V + HL                 S+ + QA  L   + + 
Sbjct: 173 -SEDRGYMAVTTEVGGQDVRVFNTHL-----------AQRRQESVRAGQAAVLATEVARH 220

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    V+ GD N   +    +   W      D      +     C A  + +     D
Sbjct: 221 DRA----VVLGDLNAVPDAPELSR-LWALAVDADPQCHPTRTAAGSCQATTDWQ--SKFD 273

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y  +       +                    R SDH  +  D D
Sbjct: 274 YVFLRG-----ITPAGHRVH----------ASRYSDHHQLYADLD 303


>gi|282882297|ref|ZP_06290928.1| exodeoxyribonuclease III [Peptoniphilus lacrimalis 315-B]
 gi|281297847|gb|EFA90312.1| exodeoxyribonuclease III [Peptoniphilus lacrimalis 315-B]
          Length = 275

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++L+     S  +  + R       +    ++ D D+  +QE          
Sbjct: 1   MKFISWNIDSLNAALTSSSNRAILTR------AVLSSIRDEDPDLFAVQETKLPPTGLSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K      +     +  + ++     +    +  K     + +YP +GA  S    G  
Sbjct: 55  KHKEILEKEFQDYSYVYVTSKEEARKSYAGTMIFYKKDLECKATYPEIGAPGSMDMEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V +  K  +   ++  +        +          +  Q L        +   
Sbjct: 114 -----IVTLEFKDFYFSTVYTPNAGDGLKRLSDRQVWDKKYLEYCQEL--------DKNK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GDFN                           +  +     +  F           
Sbjct: 161 PLVLCGDFNVAHKEIDLANPNNNHFSAGFTDEERTGFTNLLEGGFVDTFRLINGDVEGKY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++ Q     + +    +    +           DH PI
Sbjct: 221 TWWAQRIKTSKINNSGWRIDYFLVSQRIKDRVKKSHMMDSGQRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 ILEID 274


>gi|258645453|ref|ZP_05732922.1| exodeoxyribonuclease III [Dialister invisus DSM 15470]
 gi|260402804|gb|EEW96351.1| exodeoxyribonuclease III [Dialister invisus DSM 15470]
          Length = 254

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 75/306 (24%), Gaps = 78/306 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++ +SWN+N L         ++                K LDAD   LQE        
Sbjct: 2   KSLKYISWNVNGLRACMKKGFMQS---------------FKELDADCFCLQETKLQPDQI 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  + S                ++  A+  K   +       +   D   R  
Sbjct: 47  ELDLPGYYQYWNSAV-----------KKGYSGTALFTKIKPLSVTYGIGMEEHDQEGR-- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++  +     ++  +  +     +             +    L          
Sbjct: 94  -------VITADFNDHCLVTCYTPNSQRGLARLTYRMKWEDDFKKYLLDL--------SK 138

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P ++ GD N                      +  +    +  +     F      + +
Sbjct: 139 KKPVILCGDLNVAHEEIDLANPASNHMNAGFTDDERNKMTELLSDGFTDSFRYLHQDKKD 198

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A                  IDYF++       +        +             SDHCP
Sbjct: 199 AYSWWSYFAKSRERNIGWRIDYFLVSDILQPRIKAAEIHSSIL-----------GSDHCP 247

Query: 298 ISIDYD 303
           + +D +
Sbjct: 248 VELDIE 253


>gi|326446445|ref|ZP_08221179.1| hypothetical protein SclaA2_35502 [Streptomyces clavuligerus ATCC
           27064]
          Length = 300

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 86/301 (28%), Gaps = 51/301 (16%)

Query: 8   ALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           AL    +P  A   A   R+++WNI            +++  R                 
Sbjct: 29  ALFARSLPVEAPRDAVPNRVMTWNICN-------PCKESNASR--------AAEIARYAP 73

Query: 67  DIVFLQE--MGSYNAVAKVFPKNTWCIFYSTE----RLINHSKRDSNNDIHTAIAVRKKN 120
            ++ LQE  +     + +        +++       +                 A+    
Sbjct: 74  QVIGLQEACVRDVEWIRQYLKSRYGLVYHVEYGTVLQHQGRCGGLPWRPGAFGQALLSAA 133

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                +S            + +R  + +   + G+ + V + HL                
Sbjct: 134 PMTDHESVEYPDGG-----SEDRGYMAVTTTVGGRSVRVFNTHL-----------AQRRQ 177

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            ++ + Q + L   + + + +    ++ GDFN   N       +   +  ++     P  
Sbjct: 178 EAVRADQTRVLAAAVARHERA----IVLGDFNAVPNAPELTRIW--ELSADEKSPCGPSS 231

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQ----NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             + C    + +     DY  +           L   S   +++ +       + +S H 
Sbjct: 232 A-ADCEPTTDWQL--TFDYIFLRGMAPVEHGVHLTSYSDHHLVHTDVGAPGPTRPVSTHA 288

Query: 297 P 297
           P
Sbjct: 289 P 289


>gi|301309385|ref|ZP_07215327.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300832474|gb|EFK63102.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 304

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 91/331 (27%), Gaps = 55/331 (16%)

Query: 2   IRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           +RK    L    + C A  A       V++ S+NI  L+   G               + 
Sbjct: 1   MRKISEILCCVAILCCALSACSDKPATVKVSSFNI-WLNTLGGKLPP-----------SQ 48

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
             +  +    DIV +QE         ++ ++     +  E   +      N      I  
Sbjct: 49  TAKVIEASQTDIVGIQE-------GHIYEEDGIKHDHVPEIAESLGFHLFNQGEGHYILS 101

Query: 117 RKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           R   V      Y   +   KD F    N     +      +   +  I    + F+D+ E
Sbjct: 102 RYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYI----PYQPYQLNGIPYGDYPFIDTEE 157

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223
                +     ++    +  I Q  +   P  + GDFN                      
Sbjct: 158 EAIRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEPSFLDWTQRAADAGIHKIKVE 217

Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQE 273
                 +  I  NDS      ++ S                  +D+ +         + +
Sbjct: 218 WPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILDRLDFVLYSG----CKVTD 273

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           SF                 SDH  ++  ++F
Sbjct: 274 SFITGESETTSDVVVSPYPSDHRMVTSCFNF 304


>gi|288799769|ref|ZP_06405228.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288333017|gb|EFC71496.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 347

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/357 (11%), Positives = 97/357 (27%), Gaps = 74/357 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVR-----LVSWNINTLSEQEGVSLWKN----------- 45
           ++ +  A++  L+    + AQK +     +  +N   L +       ++           
Sbjct: 1   MKYFFFAVIGVLLTFLPASAQK-KYSVYGVGFYNQENLFDTCHDEGKRDYDFLPTGSYKW 59

Query: 46  SVKRTTSDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97
           +  +       + +   ++  D        I+ L E+ +  A+  +  +       +   
Sbjct: 60  NAMKYNHKLNNMSRALADMGTDVLPNIGCAIIGLAEVENSKALDDLVAQP---ALSARNY 116

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
              H +      I  A+        V      P +      S    R  + +   +  + 
Sbjct: 117 QYVHIEGPDRRGIDCALLYNPSLFSVKNTRLVPYVQKLKKDSAFYTRGFLTVSGSLADEH 176

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           I V+  HL S           +        Q + +KD +    +      + GD N    
Sbjct: 177 IAVIVCHLPSRFSESFYRELGAE-------QVKAIKDSL-LNDDPNCKVFVMGDMNDDP- 227

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK----------NLRNKIPIDYFVMDQNA 266
               +      +    ++    +        N              +    D  ++  N 
Sbjct: 228 ---IDKSMAGILRGKGNIKDVNQGDMYNPWYNILVKEGVGTLLYQGSWNLFDQILVTPNL 284

Query: 267 YKFLIQESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
                ++ FS + + ++ I  R                           SDH P+ +
Sbjct: 285 LNKDDKKDFSSLKFWKNQIFKRDYLFQTEGKYKGSPKRTTAGGVWLDGYSDHLPVVV 341


>gi|154494949|ref|ZP_02033954.1| hypothetical protein PARMER_03995 [Parabacteroides merdae ATCC
           43184]
 gi|154085499|gb|EDN84544.1| hypothetical protein PARMER_03995 [Parabacteroides merdae ATCC
           43184]
          Length = 650

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 78/315 (24%), Gaps = 70/315 (22%)

Query: 1   MIRKYVLALVFFLVPC---------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M +   LA    ++           +      + ++S+NI      + V+          
Sbjct: 29  MKQAVWLAAALMMLLPLGKVYSKERSERENNTLCIMSYNIRNGRGMDDVT---------- 78

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D+         +  D+V +QE+ S    +            +    + ++     +   
Sbjct: 79  -DFRRTAAVINKVCPDVVAVQEIDSVTGRSGGKDVLREIAGLTLMHHM-YAPAIDYDGGK 136

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             I +  K   +  +  PL G      R   R  + +  E                C   
Sbjct: 137 YGIGMLSKEKPLGYRYLPLPG------REEARALLVVEFE-----------KYIYCCTHL 179

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           SL          + +Q             +  PF IAGD N                   
Sbjct: 180 SLTEEDRMLSLPVIRQVAA---------SANKPFFIAGDMNAHPGSEFIRQL-------Q 223

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYF--VMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +  +     K     AN        IDY             I     +            
Sbjct: 224 NDFVILTDTKKPTFPAN---NPDETIDYIAAYAKDTTAFTRISSRVWDEPA--------- 271

Query: 290 KRLSDHCPISIDYDF 304
              SDH PI  D  F
Sbjct: 272 --ASDHRPIITDIIF 284


>gi|317013296|gb|ADU83904.1| exodeoxyribonuclease III [Helicobacter pylori Lithuania75]
          Length = 250

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRISWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                     + +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|317133644|ref|YP_004092958.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3]
 gi|315471623|gb|ADU28227.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3]
          Length = 256

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 76/299 (25%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +    +ADI  +QE   +   A  
Sbjct: 1   MKLISWNVNGLRACMQKGF---------------ADFFNREEADIFCVQETKMHPEQAD- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F  + +  F+++     +          +  AV  +   +  +        +       R
Sbjct: 45  FAFDGYQSFWNSAEKKGY----------SGTAVFTRVPPLSVR----YDMGEPEHTGEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  ++++++  +        +               L            
Sbjct: 91  -----VITVESEAFFLVNVYTPNSQRDLVRLDYRMRWEDAFRAYLLTLNR--------DK 137

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                   +          +     +  F      + +A 
Sbjct: 138 PVVVCGDMNVAHREIDIKNPKSNIHNAGFTPEERQKMTDLLEAGFIDTFRALYPEQKDAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                            IDYF++       +   +                  SDHCP+
Sbjct: 198 TWWSYMRKARERNAGWRIDYFLVSDRLRGQVEDSTI-----------YADVPGSDHCPV 245


>gi|269217995|ref|ZP_06161849.1| putative extracellular nuclease [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269212930|gb|EEZ79270.1| putative extracellular nuclease [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 897

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 95/345 (27%), Gaps = 63/345 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ-----------EGVSLWKNSVKR-----------TTS 52
               +V   V + S+N+                 +       +  R              
Sbjct: 304 AAPENVGGDVTVSSFNVLNYFTDLGESEAGCKSYDDREGNPVTANRCDVRGAYSKAAFEK 363

Query: 53  DYTLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSK- 103
               +      LDA +V L+E+ +          ++A +               +     
Sbjct: 364 QQQKIVSAIAGLDASVVSLEEIETSSKFGHDRDASLAALVKALNERAGREQWAYVPSPSK 423

Query: 104 -RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR-----RAVELLVEINGKKI 157
              S + I  A   +K  V  + +S  L G K+    A        RA++      G+  
Sbjct: 424 VPASEDVIRLAFVYQKGKVEPVGESRILTGNKEFTGYAREPMGQEWRALDAAGAPRGEAF 483

Query: 158 WVLDIHLKSFCF-----LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
            V+  H KS         +  +     +  L + QA+ L  W  ++     P  + GDFN
Sbjct: 484 AVVANHFKSKGSLASAYPNDGDPYQGNNNRLRTAQAKALAQWAKEQYG-NRPTFLVGDFN 542

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                          +              +  ++ +       +D+ + +  A + +  
Sbjct: 543 SYSAEDPIL-----ALRDAGYSEVRDSIGRAD-HSYQFGGAVGSLDHVLANDAARRMVAG 596

Query: 273 ESFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303
                +   E       +              R SDH P+ +  +
Sbjct: 597 ADVWSVNAMESPAFEYSRNNYNVKQLWDGGPFRSSDHDPVKVGVN 641


>gi|242770047|ref|XP_002341898.1| transcription factor, putative [Talaromyces stipitatus ATCC 10500]
 gi|218725094|gb|EED24511.1| transcription factor, putative [Talaromyces stipitatus ATCC 10500]
          Length = 753

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/364 (11%), Positives = 92/364 (25%), Gaps = 79/364 (21%)

Query: 16  CTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            + + A K  ++S+N      +         +          L+    ++ DADI  LQE
Sbjct: 372 SSQAQADKFTVLSYNTLCDQSATPSHYGYVPSRALAWEFRRDLILNEIRSHDADIACLQE 431

Query: 74  MGS---YNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVL---- 124
           +          +    N +   Y      +  H +   + D         K + +     
Sbjct: 432 IDQGNYNEFFREQLAYNDYKGVYWPRGRAMGMHEEEAKSVDGCATFFKASKYILLDKQMI 491

Query: 125 ------QQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLE 174
                  +     G  D ++R   +  + ++V     + G ++ V++ HL    +  + +
Sbjct: 492 NFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRLTGTRLIVVNAHL---YWDPAFK 548

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLV------------------------------- 203
           +      ++L ++   L +   +                                     
Sbjct: 549 DVKLIQTAILMEEITKLSEKYAKFPPCTDKTAFRFSEAEDGSQENTTPVEPAPSAEYSSG 608

Query: 204 ---PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC 245
              P +I GDFN        N                  +  +        F  +     
Sbjct: 609 DQIPLLICGDFNSAPGEAAYNLLAHGGLTEAHPDLEKRLYGNLSRVGMTHPFKLKSAYSA 668

Query: 246 -----NANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  N        +DY        +   +     +               SDH  + 
Sbjct: 669 IGELSFTNYTPDFNSILDYIWYSSTALHVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALL 728

Query: 300 IDYD 303
            ++ 
Sbjct: 729 AEFS 732


>gi|150026268|ref|YP_001297094.1| hypothetical protein FP2237 [Flavobacterium psychrophilum JIP02/86]
 gi|149772809|emb|CAL44293.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 368

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/366 (11%), Positives = 88/366 (24%), Gaps = 74/366 (20%)

Query: 2   IRKYVLALVFFLVPCTA-SVAQKV---RLVSWNINTLSEQEGVSLWKN----------SV 47
           IR +   L+ F +   A + A+K     +  +N   L +                   + 
Sbjct: 3   IRNFFTTLLLFSLTIGANAQAKKFAIHTVAFYNFENLFDTINNPNIDEEWLPNGAQNWTS 62

Query: 48  KRTTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
           K+       L +    +            +   E+ +   +  +          S +  I
Sbjct: 63  KKYKEKIHNLARVINEIGTGENQKNAPTFIGGAEIENRGVLEDLVKDPQ---LISNDYGI 119

Query: 100 NHSKRDSNNDIHTAIAVRKKNV------------------------RVLQQSYPLLGAKD 135
            H        I  A+  +KK+                             ++        
Sbjct: 120 VHFDSPDKRGIDVALLYQKKHFQPTSYINIPLLIYKKDTKAKAEKETDEDKADKDKIEIS 179

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             SR   R  + +   ++G +I V+  H  S    +   + +  +   +    + + D I
Sbjct: 180 QDSRVYTRDILLVTGLLDGDEINVIVNHWPSRSGGEKKSSPFREAAGRMD---RKIMDSI 236

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-----DSLIRFPKEKDSRCNANKN 250
             K       +  GD N         +     +             F +       +   
Sbjct: 237 -YKVNPNAKIINMGDLNDGTYNKSVKEGVGAKLKKEEVEKFGVYNPFEEMAKKGNASLFY 295

Query: 251 LRNKIPIDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRGKRL----------SD 294
                  D  ++ Q   +         +       Y                      SD
Sbjct: 296 RDAGDIFDQIMVSQTLIEKDYSSFRYWKAGIYNKPYMITTTGQYKGYPLRHGNNEIGFSD 355

Query: 295 HCPISI 300
           H P+ I
Sbjct: 356 HFPVYI 361


>gi|59712058|ref|YP_204834.1| nuclease [Vibrio fischeri ES114]
 gi|59480159|gb|AAW85946.1| nuclease [Vibrio fischeri ES114]
          Length = 889

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/383 (10%), Positives = 95/383 (24%), Gaps = 104/383 (27%)

Query: 23  KVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVFLQE 73
            + + S+N+           +     +N    +  D+      +      +DADI+ L E
Sbjct: 484 DLTITSFNVLNYFTSVAAGGDANPTGQNRGATSADDFAIQQAKILSALVAIDADIIGLME 543

Query: 74  MGSYNAVAKVF--------------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           + +                       ++ +       +     +   ++ I  A+  R  
Sbjct: 544 VENNGFGENSAINDLTTALNAQFEDEEDHYKYVEIKNKDKYQGEYLGSDAIMVALLYRPS 603

Query: 120 NVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWV 159
            V++                  + +        +       R ++     I    + + V
Sbjct: 604 EVKLKGKARVIKTPEQHIAENTITRDNNGTIEFNPAYDKYQRHSLVQKFMIKDAKEPLTV 663

Query: 160 LDIHLKSFCF-----------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
           +  HLKS                   +            A+ + D +   K      +I 
Sbjct: 664 VVNHLKSKGSECIEQWQNFEEDKDPSDLQGNCNRFRVSAAKAIGDELESVKGD---VLIL 720

Query: 209 GDFNR-----------KINYLGNNDDFW-----------------------KTIDPNDSL 234
           GD N              +    N D +                       +       +
Sbjct: 721 GDMNAYGMEDPLLTLTDYSQEKYNRDIFTASYTTLGTDKDGKPLPYETTGSQVTQGYGYI 780

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
                   +   +         +D+ + +++  K + +     I   E ++     +   
Sbjct: 781 NLNTLLHGTDTFSYTYSGELGNLDHALANKSLAKRVAEIEDWHINAAESNLFEYSPKYTG 840

Query: 292 ----------LSDHCPISIDYDF 304
                      SDH PI I  D+
Sbjct: 841 DMVKYNDMYSASDHDPIVITLDY 863


>gi|71909379|ref|YP_286966.1| endonuclease/exonuclease/phosphatase [Dechloromonas aromatica RCB]
 gi|71849000|gb|AAZ48496.1| Endonuclease/exonuclease/phosphatase [Dechloromonas aromatica RCB]
          Length = 252

 Score = 78.8 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 80/284 (28%), Gaps = 49/284 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----YN 78
            + + ++NI+    Q    +              LR+  ++L+ DIVFLQE+      + 
Sbjct: 5   TLHITTFNIHKGFSQFNRRMM----------VHELRERLRHLNPDIVFLQEVQGLHLGHA 54

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                +P +    F + +   + +       +  H   A+  +   +   +  +   +  
Sbjct: 55  ENHDDWPDSPQHEFLAEDVWASCAYGQNMIYDHGHHGNAILSRLPILHSHNQDVTHLQF- 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  +   +E+             S                   +Q   L  ++ 
Sbjct: 114 ----EKRGLLHCQIELPEGPAAHCVCVHLSLFG------------YSRRKQMDALATYLD 157

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +  +   P +IAGDFN   N  G +    + +   +              +         
Sbjct: 158 KTADPTAPLIIAGDFNDWGNRAGEH--MARRLGLREVFSGPSGN---PARSFPAAMPMFR 212

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +D   +            F                +SDH  +S 
Sbjct: 213 LDRIYVRG----------FDVKRTEVHHGLP-WSNISDHAALSA 245


>gi|260909404|ref|ZP_05916112.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 472 str. F0295]
 gi|260636496|gb|EEX54478.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 472 str. F0295]
          Length = 249

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 80/302 (26%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G                      K+LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAVVGKDFE---------------NIFKSLDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  F++           ++   ++  A+  ++  +       +   D   R    
Sbjct: 45  LQFDGYESFWN----------YADKKGYSGTAIYTRHKPLNVTYGIGIDQHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                   Q     + ++    +   
Sbjct: 91  -----VITLEMPTFFLVTVYTPN-------SQDELRRLDYRMQWEDDFQAYL-HDLDKRK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
           P ++ GD N     +   +      +                       + K        
Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQKMTQLLGAGFTDTFRWKYPEEITYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++       ++       +             SDHCP+ +
Sbjct: 198 WWSYRFKARERNTGWRIDYFLVSDRLQSEVLDAKIHTDIL-----------GSDHCPVEL 246

Query: 301 DY 302
           + 
Sbjct: 247 EL 248


>gi|240281901|gb|EER45404.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Ajellomyces capsulatus H143]
          Length = 675

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/358 (10%), Positives = 89/358 (24%), Gaps = 75/358 (20%)

Query: 22  QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +K   +S+N      +  +      +          L+    K  +ADIV LQE+   + 
Sbjct: 290 EKFTALSYNTLCDRSATHQQHGYAPSRALAWEYRRDLILNEIKGYNADIVCLQEIDQGSY 349

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++     +              K + + +         
Sbjct: 350 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKVVDGCATFFKGSKYILLEKNMIHFGQTA 409

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++      ++G+++ V+++HL        ++   +  
Sbjct: 410 VRRPDAKGQDDIYNRLWQKDNIAVVTYLENRLSGERLIVVNVHLYWDPAYKDVKLIQAAI 469

Query: 181 CSLLSQQAQWLKDWITQKKESLV---------------------------------PFVI 207
                 Q       I    +                                    P +I
Sbjct: 470 LMEEVTQLAEKYSKIPACTDKTAFRFSEPEHSTDGGGTATPVEPAPSVEYSSGSHIPLII 529

Query: 208 AGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NA 247
            GDFN                  ++       +  +        F  +            
Sbjct: 530 CGDFNSYPGSAVHELMSRGRLIEDHPDLEKRLYGNLSRVGMSYPFNLKSAYGAIGELDFT 589

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304
           N        IDY     +A +        +  Y +           SDH  +  ++ F
Sbjct: 590 NYTPDFADVIDYIWYTSSALQVTGLLGAVDKEYLQRVPGFPNYHFPSDHLALMAEFSF 647


>gi|212697551|ref|ZP_03305679.1| hypothetical protein ANHYDRO_02124 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675454|gb|EEB35061.1| hypothetical protein ANHYDRO_02124 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 275

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWNI++L+        +  + R       +       DADI+ LQE          
Sbjct: 1   MKIISWNIDSLNAALTSDSNRAKMSRD------VLDTIIKEDADIICLQETKLPRTGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K     ++        S ++     +       K       SYP L A D+  +    
Sbjct: 55  KHKEILESYFPQYNYAWISSQEPARKSYAGCLTFYKKEFEPIISYPTLDAPDTMDQE--- 111

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                L+ +  +  ++  ++  +     S  +         +   + L            
Sbjct: 112 ---ARLITLEFENFYLTQVYTPNAGSGLSRLDLRQVWDKKYANYLEKLDQ--------NK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                           +  +     +  F           
Sbjct: 161 PVIACGDFNVAHKEIDLKHPENNHKSAGFTDEERSGFTNLLNKGFVDTFRYLHGDVEGKY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++     + + +    +    +           DH PI
Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFIVSDRIKEKIKESDMIDSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            I+ D
Sbjct: 270 YINMD 274


>gi|148886652|ref|NP_001092156.1| tyrosyl-DNA phosphodiesterase 2 [Xenopus laevis]
 gi|281312450|sp|A5D8M0|TYDP2_XENLA RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
           homolog
 gi|146327082|gb|AAI41729.1| LOC100049743 protein [Xenopus laevis]
          Length = 371

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 85/286 (29%), Gaps = 46/286 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
              ++WNI+ L E                    +         D+VFLQE+         
Sbjct: 123 FTFLTWNIDGLDESN-----------VAERARAVCSCLALYTPDVVFLQEV--------- 162

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +C +     +       + ++  TA+ ++K  V+++ Q      +         R
Sbjct: 163 --IPPYCEYLKKRAVSYKIITGNEDEYFTAMMLKKSRVKLISQEIVPYPST-----LMMR 215

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   V I+G  I ++  HL+S                   +Q   +   +        
Sbjct: 216 NLLVANVNISGNSICLMTSHLEST----------KDHSKERLKQLDTVLKKMMD-APPSA 264

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKIPI 257
             +  GD N +   +        TI      +      R+  +     N      +++  
Sbjct: 265 TVIFGGDTNLRDQEVAKIGGLPNTILDVWEFLGKPEHCRYTWDTKLNNNLRACYTSRLRF 324

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D  +   +     +   F  +     +    G+  SDH  +  D+D
Sbjct: 325 DRILYRASMEGSQVIPQF--LNLVGTEKLDCGRFPSDHWGLLCDFD 368


>gi|121703439|ref|XP_001269984.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           clavatus NRRL 1]
 gi|119398127|gb|EAW08558.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           clavatus NRRL 1]
          Length = 439

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 90/311 (28%), Gaps = 31/311 (9%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            +    L+  L    A++  +  +++ N+  L      +         T +  L+ +   
Sbjct: 1   MRSTYFLLAGLPSALAAIGGEFNVLTLNVAGLPPIFNGNDVPGDK---TENSRLIGKKFA 57

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               D++ +QE  +Y+A       + +    S    I       +N      A R K   
Sbjct: 58  EYGYDVIHVQEDFNYHAAIYETDNHPYRTPTSGGAAIGSGLNTLSNFEFLNFA-RTKWAT 116

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S         F+    R A        G  +   ++H  +           +   +
Sbjct: 117 CSNASGADCLTPKGFTSMRVRVA-------EGVYVDFYNMHTDAGS--------KTEDVA 161

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI----RFP 238
                 Q + D+I          V+ GD N +    G     ++T +   +         
Sbjct: 162 ARGANLQQVADYIRTY-SVGNAVVVFGDTNARYTSSGEKIRVFQTENGMTNPWVQLVLNG 220

Query: 239 KEKDSRCNA-----NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            E     +         +     +D      +    L    ++        +   G  LS
Sbjct: 221 DEPKEGTDPLLCENPSTVNTCETVDKIFYRGSRAIDLQATFWNYESSK--FLSESGTILS 278

Query: 294 DHCPISIDYDF 304
           DH P++ ++ +
Sbjct: 279 DHNPVTSNFTW 289


>gi|15823783|dbj|BAB69072.1| sphingomyelinase [Pseudomonas sp. TK4]
          Length = 516

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 86/327 (26%), Gaps = 45/327 (13%)

Query: 8   ALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           AL+ FL    A  A         L++ N   L+    +    +   +  +       Y +
Sbjct: 10  ALLAFLAATQAQAAPDPRPDAYNLLTHNAFFLTP---LPFKFSWSNQDRARLMTRADYLE 66

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFY-------STERLINHSKRDSNNDIHTAIA 115
               D++   E+    A   +         +       S+      +   + N     +A
Sbjct: 67  ER--DLIIFNELFDNAASDILLNGLKDRYPHQTPVLGRSSAGWDATTGNPAANLDDGGVA 124

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  +     +  Y L        R  N+  V + V    +   V+  H ++    DS   
Sbjct: 125 IVSRWPIARRVQY-LYHDACGADRLANKGFVYVKVLRGERPFHVIATHTQA---ADSACP 180

Query: 176 TYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKT------I 228
               +      Q + ++ +I  +   +     I GD N             +        
Sbjct: 181 DGGRAV--RESQFREMRAFIDRENIPANEVLFIGGDLNVIRGSDEYPHMLAQLDLREPDS 238

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQES----- 274
               S     +             N            +DY ++     +     +     
Sbjct: 239 YAGASATFDTRRNGVTGYQYPYKDNGPGKAPSNPPEYLDYILVSNRHGQVSYWHNQALDI 298

Query: 275 -FSEILYNEDDIKSRGKRLSDHCPISI 300
                  ++       +  SDH P++ 
Sbjct: 299 PSPRWSASDGVNTWYYQDYSDHYPVAA 325


>gi|260775755|ref|ZP_05884651.1| deoxyribonuclease I-like 2 precursor (DNase I-like 2) [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260608171|gb|EEX34340.1| deoxyribonuclease I-like 2 precursor (DNase I-like 2) [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 294

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/286 (11%), Positives = 85/286 (29%), Gaps = 35/286 (12%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--Y 77
               + ++SWNI              S          +    ++   D++ +QE+     
Sbjct: 40  APDGLHVISWNIQVFGR---------SKASKPQVMAHIVATLQHY--DLIAIQEIRDKSQ 88

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A+ ++         ++   ++      S +    A   R   +  L+         D  
Sbjct: 89  TAIQQLLEALNNASQHTYTMIVGERLGRSASKEQYAYVYRVDVLTPLR-----FYTSDDP 143

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               +R  +    +        ++ +++ +       E          + QA  ++D   
Sbjct: 144 DDVFHREPLVAHFQCPACVSPNLIVVNVHTDPDEAHEEVDALSDVVTTAIQASAIQD--- 200

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                    ++ GD N    Y+  ++     +  +   +    + D+             
Sbjct: 201 --------VLVLGDLNADCGYMNQHERETSPLFGDGFTMLIGDDVDTTTGKTH-----CA 247

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            D  V+  +    +          + D  +++ K +SDH P+++  
Sbjct: 248 YDRLVVTNSLVPRIEHARVVAFDDDLDLDEAQTKAVSDHYPVALTL 293


>gi|150006466|ref|YP_001301210.1| hypothetical protein BVU_3985 [Bacteroides vulgatus ATCC 8482]
 gi|254881617|ref|ZP_05254327.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294777013|ref|ZP_06742471.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|319643001|ref|ZP_07997635.1| hypothetical protein HMPREF9011_03236 [Bacteroides sp. 3_1_40A]
 gi|149934890|gb|ABR41588.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254834410|gb|EET14719.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294449071|gb|EFG17613.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|317385366|gb|EFV66311.1| hypothetical protein HMPREF9011_03236 [Bacteroides sp. 3_1_40A]
          Length = 353

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 87/311 (27%), Gaps = 78/311 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   +   ++++V++N+++   +                     +     + D++  QE 
Sbjct: 94  PTKYANENRLKVVTYNVHSFGNEITGFS-----------AKEFAEMMNKEETDVLCFQEY 142

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +   +NT+   +            S      + A+  +      Q+       
Sbjct: 143 RGNGDFTEQDLQNTYAKIF----------PYSFIPEGLSQAIYSRYPIRQSQTIEFPNTN 192

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD----------------------S 172
           +         A+   +++ G  I ++++H+++  F                         
Sbjct: 193 N--------GAIWADLDVKGMTIRIINVHMQTTSFDRMRSKAAQARGEQDEEQERGIYLG 244

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
             + +  +    + QA+ +   I   +    P ++ GDFN         +     +    
Sbjct: 245 YSDNFRENTVRRAGQAEQISSLINATE---YPLIVCGDFNDPPG-TFTYETLKNGLKDG- 299

Query: 233 SLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                  +                  IDY          L    +  I Y+         
Sbjct: 300 ------FQTAGEGYGATYRGFHHLLRIDYLFHS----TLLEGIKYKVIPYD--------- 340

Query: 291 RLSDHCPISID 301
            +SDH P+ ++
Sbjct: 341 -MSDHNPVYLE 350


>gi|17862022|gb|AAL39488.1| LD05405p [Drosophila melanogaster]
          Length = 526

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 85/336 (25%), Gaps = 46/336 (13%)

Query: 14  VPCTASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
              + S + ++R+VS+N+          +     S       +      L        ++
Sbjct: 189 TTNSLSESNEIRVVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFINEIIGYNS 248

Query: 67  DIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           DI+ LQE+        + ++  +  +            ++  +    ++   +    +  
Sbjct: 249 DILCLQEVDQRIFDFDLKEILEQPPYNYHGIMAPKGKCAEGVAIFFRNSRFDLLDSQILH 308

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELL-------------VEINGKKIWVLDIHLKSFCFL 170
           L  + P L   +S        A                 + I G   +VL  +   +   
Sbjct: 309 LGSNIPALPVFESLWNKIKVNAQLAERICERSTTLQTCLLRIKGTDNYVLVANTHLYFHP 368

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFNRKINYLGNNDDFWKT 227
           D+           +    Q +   I          +  +  GDFN      G      + 
Sbjct: 369 DADHIRLLQMGFSMLFVEQSISKAIKDFNISSHKNIGLIFCGDFNSVP-ECGIYKLMTEQ 427

Query: 228 IDPNDSLIRFPKE------------------KDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           +                                +    +        +DY     + ++ 
Sbjct: 428 LAEKTLEDWQSNAEQAVSNVELAQPFKMASAYGAPEYTHYTTLFAGCLDYVFYQNDRFEV 487

Query: 270 LIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           L      +E     +         SDH  +  D  F
Sbjct: 488 LKVVPLPTEEELKANTAIPSAVFPSDHVALVADLKF 523


>gi|221474789|ref|NP_723735.2| CG31759, isoform C [Drosophila melanogaster]
 gi|221474791|ref|NP_723736.2| CG31759, isoform D [Drosophila melanogaster]
 gi|220902023|gb|AAN10808.2| CG31759, isoform C [Drosophila melanogaster]
 gi|220902024|gb|AAN10809.2| CG31759, isoform D [Drosophila melanogaster]
          Length = 564

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 85/336 (25%), Gaps = 46/336 (13%)

Query: 14  VPCTASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
              + S + ++R+VS+N+          +     S       +      L        ++
Sbjct: 227 TTNSLSESNEIRVVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFINEIIGYNS 286

Query: 67  DIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           DI+ LQE+        + ++  +  +            ++  +    ++   +    +  
Sbjct: 287 DILCLQEVDQRIFDFDLKEILEQPPYNYHGIMAPKGKCAEGVAIFFRNSRFDLLDSQILH 346

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELL-------------VEINGKKIWVLDIHLKSFCFL 170
           L  + P L   +S        A                 + I G   +VL  +   +   
Sbjct: 347 LGSNIPALPVFESLWNKIKVNAQLAERICERSTTLQTCLLRIKGTDNYVLVANTHLYFHP 406

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFNRKINYLGNNDDFWKT 227
           D+           +    Q +   I          +  +  GDFN      G      + 
Sbjct: 407 DADHIRLLQMGFSMLFVEQSISKAIKDFNISSHKNIGLIFCGDFNSVP-ECGIYKLMTEQ 465

Query: 228 IDPNDSLIRFPKE------------------KDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           +                                +    +        +DY     + ++ 
Sbjct: 466 LAEKTLEDWQSNAEQAVSNVELAQPFKMASAYGAPEYTHYTTLFAGCLDYVFYQNDRFEV 525

Query: 270 LIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           L      +E     +         SDH  +  D  F
Sbjct: 526 LKVVPLPTEEELKANTAIPSAVFPSDHVALVADLKF 561


>gi|262037338|ref|ZP_06010804.1| endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii
           F0264]
 gi|261748641|gb|EEY36014.1| endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii
           F0264]
          Length = 249

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 87/290 (30%), Gaps = 59/290 (20%)

Query: 24  VRLVSWNINTLSEQ---EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75
           ++ + +NI   + +   + +   +  +  + S  + + ++ K  + DIV L E+      
Sbjct: 1   MKFLLYNIRYGTGKYLKQPLKHIRGYLGHSLSHVSRIGEFIKGYNPDIVGLVEVDLGSFR 60

Query: 76  --SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               N    +         +  +   N              A+  K     ++ + L   
Sbjct: 61  TEEKNQAELLGKITGNHCVFQYKYQKNSRYMKVPMVRKQGNALLSKTEIKSKKFHYLNNG 120

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                       + + +E +   ++++ + L                     +Q   L+ 
Sbjct: 121 MKK---------LVMEIETDSVTVFLVHLAL---------------GGKTRLKQIVQLRK 156

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            I   ++   PF++AGDFN             + I+              R     +   
Sbjct: 157 LIQDCRK---PFIVAGDFNVL--------WGNEEIELFLEASGLHNVNVHREPTFPSWAP 205

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           K  +D+ +  +               +           LSDH P+ ID++
Sbjct: 206 KKELDFILCSKE---------IKVKEFQVIKTL-----LSDHLPVIIDFE 241


>gi|170588391|ref|XP_001898957.1| CCR4 [Brugia malayi]
 gi|158593170|gb|EDP31765.1| CCR4, putative [Brugia malayi]
          Length = 625

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 92/351 (26%), Gaps = 74/351 (21%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  +     S   +           + +  ++ +ADI+ LQE+ +    
Sbjct: 248 TFTVLCYNVLCDKYATNSLYSYCPSWALNWEYRKAAILKEIRHYEADIITLQEVETEQFR 307

Query: 81  AKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIAVRKKNVRVLQQSYPL------ 130
               P+     +       +      + +       AI  +     + ++          
Sbjct: 308 CLFQPELEQIGYAGIFSPKSRAKTMGEEERKFVDGCAIFWKYDKFELEKEHLIEFTQVAI 367

Query: 131 ---LGAKDSFSRAGNR--RAVELLVEIN---------------------GKKIWVLDIHL 164
                ++   +R   +   A+  + +I                      G  + V   H+
Sbjct: 368 KKAPTSEKILNRVMPKDNIALCAVFKIRENVYANQPAGQMTMAPSDNVVGNPLVVSTAHI 427

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINY---- 217
                     +       +L Q+   L D I+++       +P +I GD N         
Sbjct: 428 HW---DPEFCDVKLIQSMMLVQEINTLLDEISERYRITPHQIPVLICGDLNSLPESGVVE 484

Query: 218 ---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNK 254
                              D        +D    +       C          N  L  K
Sbjct: 485 FLSKGAISREHPDLKEFRQDPCITRFSASDDPTVYTHGLRLDCAVDPNSMPFTNYTLEFK 544

Query: 255 IPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             IDY      +      L   S   +L N+          SDH PI   +
Sbjct: 545 GVIDYIFSTPQSLARLGVLGPLSMEWVLANKIIGFPHAHVPSDHVPIMAQF 595


>gi|239813296|ref|YP_002942206.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
 gi|239799873|gb|ACS16940.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
          Length = 267

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 81/311 (26%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +L S N+N L                 +    +  +   L  D + +QE+         
Sbjct: 2   FKLTSLNLNGLRS---------------AATKGVADWVAELAPDCICMQEIR-------- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +     +      +    +   A+  ++         ++G  D+   A  R
Sbjct: 39  VQASDIEGRFEEMAGLKGHFHFAEKKGYAGTAIYTRHAPSAV----VVGWGDAEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +EL  +   +K+ ++  +  S    +  +                L        +   
Sbjct: 95  Y-LELRFDTPRRKLSIISCYFPSGSSGEERQEAKFRFLKGFFPHLTAL--------KKER 145

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDS----LIRFPKEKDS 243
            F++ GD N                             + +D        +  +   K  
Sbjct: 146 EFILCGDINIAHKEIDLKNWRGNQKNSGFLPEERAWMTRLLDAGADGAGLVDVYRLLKPD 205

Query: 244 RCN-ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
               A     N+           +DY +           E              +  + S
Sbjct: 206 TTGEAYTWWSNRGQAYANNVGWRLDYHLATPALGALARSEQI-----------YKTIKFS 254

Query: 294 DHCPISIDYDF 304
           DH PI++DYDF
Sbjct: 255 DHAPITVDYDF 265


>gi|310826147|ref|YP_003958504.1| exodeoxyribonuclease III [Eubacterium limosum KIST612]
 gi|308737881|gb|ADO35541.1| exodeoxyribonuclease III [Eubacterium limosum KIST612]
          Length = 254

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 72/305 (23%), Gaps = 79/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++L SWN+N +                        ++ +    DI+ LQE+ +       
Sbjct: 1   MKLYSWNVNGIRAVAQKGF---------------TEWVEAAQPDILCLQEVKAAEDQISE 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +  F+       +S                          P+           
Sbjct: 46  DIRCIPGYHSFFHAAERKGYSGTAVYYKEE-----------------PISITTGLSEDRF 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           N     +++E    +  + +I+  +    D                       +      
Sbjct: 89  NHEGRTIIMEYP--EFTLFNIYFPNGQKDDER-------LQFKMDFYDCFLKDVNALVAQ 139

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD N                    L    ++      N  +  +         
Sbjct: 140 GKKVIICGDVNTAHTEMDLKNPKSNAKRSGFLPMEREWLDHFFENGYVDTYRHLH-PDTV 198

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF +  NA   +   +    +             SDHCP
Sbjct: 199 EYSWWSYRFNARANNAGWRIDYFFVSDNAIDMVKDAAIHTEVT-----------GSDHCP 247

Query: 298 ISIDY 302
           +SI+ 
Sbjct: 248 VSIEI 252


>gi|220911966|ref|YP_002487275.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6]
 gi|219858844|gb|ACL39186.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6]
          Length = 277

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 79/313 (25%), Gaps = 65/313 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +A     +R+ S N+N L                      +  + +  D DI+ LQE+ 
Sbjct: 2   SSALKKDHLRIASVNVNGLRAAYKNG---------------MAAWLEPRDVDILCLQEVR 46

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           + +A+ +      W I ++                   +A+  +   +  ++        
Sbjct: 47  APDAIVRQLLGEGWHILHAEAEAKG----------RAGVAIASREEPIATRNGIGDDYFA 96

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +  R                ++ V   ++ S       ++               +   +
Sbjct: 97  TAGRWVEADFRVTDASGERVQLTVASAYVHSGEVDTPKQDDKYR-------FLDAMSTRL 149

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPK 239
            +  +     ++ GD N     L   +                 F + +  +       +
Sbjct: 150 PELSKHSDHALVVGDLNVAHTPLDIRNWKGNLKKAGFLPDERAYFDRFLGEDIGWHDVHR 209

Query: 240 EKDSRC-NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                          +           IDY +                     D   +  
Sbjct: 210 TMSGEMDGPYTWWSWRGKAFDNDAGWRIDYHLATPALAASATSA-------VVDRAATYD 262

Query: 290 KRLSDHCPISIDY 302
            R SDH P+ +DY
Sbjct: 263 TRFSDHAPLVVDY 275


>gi|253751487|ref|YP_003024628.1| exodeoxyribonuclease [Streptococcus suis SC84]
 gi|253753388|ref|YP_003026529.1| exodeoxyribonuclease [Streptococcus suis P1/7]
 gi|253755783|ref|YP_003028923.1| exodeoxyribonuclease [Streptococcus suis BM407]
 gi|251815776|emb|CAZ51378.1| exodeoxyribonuclease [Streptococcus suis SC84]
 gi|251818247|emb|CAZ56055.1| exodeoxyribonuclease [Streptococcus suis BM407]
 gi|251819634|emb|CAR45379.1| exodeoxyribonuclease [Streptococcus suis P1/7]
 gi|292558119|gb|ADE31120.1| exodeoxyribonuclease III [Streptococcus suis GZ1]
 gi|319757905|gb|ADV69847.1| exodeoxyribonuclease [Streptococcus suis JS14]
          Length = 275

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 56/306 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE    +     
Sbjct: 1   MKLISWNIDSLNAALTAESPRALLSR------AVIDTLVTEDADIIAIQETKLSDKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++        S  +     +       KN      ++P +GA  +    G  
Sbjct: 55  KHLEILESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLTPTITFPEIGAPTTMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        +S  
Sbjct: 114 -----IITLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQYADYLAKL--------DSHK 160

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N                   +       +  +        F        NA 
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +    +           DH PI
Sbjct: 221 TWWAQRSRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYDF 304
            ++  F
Sbjct: 270 VMEISF 275


>gi|32475225|ref|NP_868219.1| exodeoxyribonuclease [Rhodopirellula baltica SH 1]
 gi|32445766|emb|CAD78497.1| exodeoxyribonuclease [Rhodopirellula baltica SH 1]
          Length = 256

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/305 (8%), Positives = 76/305 (24%), Gaps = 74/305 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++L+SWN+N +                       R++ ++   D++ LQE  +     
Sbjct: 3   ETLKLISWNVNGIRASMDKGF---------------REFVESEQPDVLCLQETKAEPEQV 47

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +                       ++ ++   +   +       +   D+  R  
Sbjct: 48  DLSWADELGYHQVWNTATKRG--------YSGVSTWSRVEPLKVTKGLSIEEHDNEGR-- 97

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++        +++++  +     +  +             + L          
Sbjct: 98  -------VLTTTFDDFHLVNVYTPNSQRGLARLDYRMQWDEAFLDYVKKLNRR------- 143

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNA 247
             P +  GD N     +   +      +                   I   ++       
Sbjct: 144 -KPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQERAGLDAVTEAGFIDSFRQFHDGPGH 202

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           +DYF + +N +  +        +             SDHCP+
Sbjct: 203 YSWWTYRSDARARNIGWRLDYFWVAKNFWDRVADARIRCEI-----------HGSDHCPV 251

Query: 299 SIDYD 303
            +   
Sbjct: 252 ELTLT 256


>gi|116203121|ref|XP_001227372.1| hypothetical protein CHGG_09445 [Chaetomium globosum CBS 148.51]
 gi|88177963|gb|EAQ85431.1| hypothetical protein CHGG_09445 [Chaetomium globosum CBS 148.51]
          Length = 654

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 42/343 (12%), Positives = 88/343 (25%), Gaps = 72/343 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQE 73
            +    + +   S+N+  L+              T++    +  +  +     D++F+QE
Sbjct: 289 VSQGKCKALTFGSYNVENLAP-------------TSAHLPKVAGHIVDYLKTPDLMFIQE 335

Query: 74  MGSYNA------------VAKVFPK-----NTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +   +             +  +        N    F   E + N        +I  A   
Sbjct: 336 VQDDSGPTDDGVVTANATLTALVGAVKSLSNVTYAFAEVEPVSNEDGGQPGGNIRVAYIY 395

Query: 117 RKKNVRV---------------------------LQQSYPLLGAKDSFSRAGNRRAVELL 149
           R + V +                           +    P      + +   +R+ +   
Sbjct: 396 RPEIVSLYKPNQGGANDATEVVAQGKGNNSQSAPVLSFNPGRIDPANAAWKASRKPLAAA 455

Query: 150 VEING--KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKK--ES 201
               G  K  + +++H  S     SL     P    +      QA     +I +    + 
Sbjct: 456 WMAKGSKKPFYTVNVHWSSKGGGTSLHGDRRPPINGAVDARMAQANVTGSFIAEILALDP 515

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               + AGDFN            +  I     L    K             N   +D+  
Sbjct: 516 AAKVIAAGDFNEFAFVQPMK--TFSAISGMVDLDEAAKLPIEERYTYAYDMNAQALDHMY 573

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                    +   +    +SDH      ++F
Sbjct: 574 VSPALAHSKTTRFEHIH---VNSWAAFDDVVSDHDASIALFNF 613


>gi|289665987|ref|ZP_06487568.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289670449|ref|ZP_06491524.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 329

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 74/296 (25%), Gaps = 70/296 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ ++N+N                  TS  + L ++ +    DIV LQE+ S  A     
Sbjct: 7   KIATFNVNG----------------ITSRLSHLLEWLQREQPDIVGLQELKSTQAA---- 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                       R   +            +A+  +    ++    L              
Sbjct: 47  ------FPEQAIRDAGYGVIWQGEKSWNGVALLARGTEPVEIRRGLPWDPGDTQSRYLEA 100

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           A+          + V  ++L +       +  Y  +        + L        +   P
Sbjct: 101 AIH--------GVVVACLYLPNGNPQPGPKFDYKLA------WFERLIRHAKTLVDLPHP 146

Query: 205 FVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNANK 249
             + GDFN         D                 ++T+              +      
Sbjct: 147 VALIGDFNVVPTDADIYDPKGWRKDALLQPESRAAYQTLLAQGWTDSLLAMHGATPIYTF 206

Query: 250 NLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +          ID+ ++++     L            +      ++ SDH P
Sbjct: 207 WDYFRQHFARDRGLRIDHLLLNRKLAPGLQDAGV-------NKWVRALEKASDHAP 255


>gi|254512323|ref|ZP_05124390.1| endonuclease/exonuclease/phosphatase [Rhodobacteraceae bacterium
           KLH11]
 gi|221536034|gb|EEE39022.1| endonuclease/exonuclease/phosphatase [Rhodobacteraceae bacterium
           KLH11]
          Length = 336

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 91/350 (26%), Gaps = 65/350 (18%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           MIR  VL L+       A+ A  +R+ S+N     +  G+ L    ++R       + Q 
Sbjct: 1   MIRALVLLLL-----PFAAQADTLRIASFNTELSRKGPGLLLRD--IQRDDPQVEAVVQV 53

Query: 61  AKNLDADIVFLQEMG------SYNAVAKVFPKNTWCIFYSTERLINHS------------ 102
                 DIV LQ +       +  A  +   ++     +S     N              
Sbjct: 54  LAATRPDIVALQGIDWDLDGLTLAAFTRRLSESGLSYPFSFTAQPNSGLETTLDLDGDGK 113

Query: 103 -------KRDSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRA 145
                  +          +AV  +             +L +  P         +      
Sbjct: 114 TGGPGDAQGWGAFSGQNGLAVLSRYPVKVDQARSFSGMLWRDLPGATLPTEGGKPFPSAI 173

Query: 146 V------------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                         + +E  G  + ++  H     F    +     +   +   +  L  
Sbjct: 174 AQAAQRLSSTAHWVIPIEAPGGPVNLMTFHASPPVFDGPEDRNGLRNRDEIRLWSLLLNG 233

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            +     +   FVIAGD N+       +      +  +                      
Sbjct: 234 ALGPALST--RFVIAGDANQDPAQGEGHKSAISELLEH---PLVQDPFPRNTATVLWKGV 288

Query: 254 KI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               +DY +   +    L         + +   +   +  S H  + +D 
Sbjct: 289 GEMRVDYIL--PSVGWELRDAGV---YWPDQPERKIAETASRHRLVWVDL 333


>gi|330952069|gb|EGH52329.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7]
          Length = 291

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 80/292 (27%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      +    +     +          +   +         D+V L
Sbjct: 30  PEDGRLRLLSFNIQVGISTQRYHHYLTRSWQHLLPHGGRAGNLQKIGDLINEF--DLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +                  R+       +  V  +      + +PL
Sbjct: 88  QEVDGGSMRSGFINQVEHLAQLGGFPYWYQQLNRNLGRLAQHSNGVLSRLRPTKIEDHPL 147

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    ++Q  +
Sbjct: 148 PGPAG-------RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAY 187

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N   N L  +            +               +
Sbjct: 188 IRELIGGY----RHQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPS 233

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++        +Q     I              SDH P++++ 
Sbjct: 234 WRPQRCLDHILLSPTLTLERVQVLAQPI--------------SDHLPVAVEI 271


>gi|300774457|ref|ZP_07084320.1| AP endonuclease domain protein [Chryseobacterium gleum ATCC 35910]
 gi|300506272|gb|EFK37407.1| AP endonuclease domain protein [Chryseobacterium gleum ATCC 35910]
          Length = 261

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 81/295 (27%), Gaps = 76/295 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++VS+N                             Y K+ DAD+  LQE         
Sbjct: 25  DIKVVSFNTRAGGRGNEGVGP----------------YLKSQDADVFLLQE--------- 59

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                          +  H       +    + +  K+  + QQ        D       
Sbjct: 60  ------------DAGIKYHFDGYQKANPGGGLTILTKHKIIKQQII------DPQDEDVR 101

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL--------------ENTYSPSCSLLSQQA 188
              V   +EI G+    +D++L  F F   +              ++          +  
Sbjct: 102 IPGVLADIEIKGRTYRFIDVYLNPFRFEKDMVKLNGDTDTDEQKIKDVIKRLIPTFKKHQ 161

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +       + S  P ++AGDFN   N           +            K S   + 
Sbjct: 162 DQVALIREAIENSPYPVILAGDFNSVPNSYEYY-----HLSDGLEDTFLTAGKGSAT-SF 215

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + +  I IDY    ++            I Y  D   S    +SDH P+ + + 
Sbjct: 216 HDYKFPIRIDYVFSSKSLKA---------ISYKVDRSVS----ISDHYPVIVKFS 257


>gi|254475984|ref|ZP_05089370.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp.
           R11]
 gi|214030227|gb|EEB71062.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp.
           R11]
          Length = 271

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/296 (9%), Positives = 72/296 (24%), Gaps = 48/296 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L ++NI      +              D   +        ADI+ LQE+  +   ++ 
Sbjct: 2   IKLATYNIQYCMGLD-----------EKIDPDRIADAVG--GADILALQEVDRFWERSED 48

Query: 84  FPK-----NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             +           +                    + +  +   +  ++ PL        
Sbjct: 49  QDQVEELTRRLPHVHHVFAPGIDVHHPRLGRRQHGLMILSRWPILSHRTMPLPMRPHPDL 108

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI--- 195
             G     E ++      + + + H       ++L    +   + + +QA          
Sbjct: 109 FVGQSLLQEAVIATPEGVLRLYNTHFNYG--DEALIAEQAAFSAAVMRQALQAGGVWGGG 166

Query: 196 ---------TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                              V+ GD N               +              S   
Sbjct: 167 NVERDKSNGDDAPPMPETTVLVGDLNVGPTSDAYRILMRSGLVDPW-----VSLGQSEEG 221

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +  +   +D+ +  ++            I  +           SDH P+ + +
Sbjct: 222 VTSSHLDDKRLDHVLCTED-----------CISDDAQMWIDTTAVGSDHMPVWLQF 266


>gi|293339924|ref|XP_002724703.1| PREDICTED: rCG35247-like isoform 2 [Rattus norvegicus]
 gi|293351343|ref|XP_001057412.2| PREDICTED: rCG35247-like isoform 1 [Rattus norvegicus]
          Length = 340

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 35/287 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A  +R+ ++N+ +  + +       SV         + Q       DI  +QE+   +  
Sbjct: 81  ATALRIGAFNVQSFGDHKASDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 129

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           AV+ +  +      +    + +                RK  V V   +Y     +D   
Sbjct: 130 AVSLLMEQINSVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVVSV-VSTYQYPDPED--- 185

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A +R    +     G         L       +     +   +L       +  W    
Sbjct: 186 -AFSREPFVVKFSAPG----CAAKELVLIPLHAAPNQAVAEIDALYDVYLDVIDKW---- 236

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    +  GDFN    Y+  +D     +  +        +       N +       D
Sbjct: 237 --NTDDMLFLGDFNADCKYVKAHDWPSIRLRSSQVFKWLIPDSADTTVGNSDCAY----D 290

Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             V+      K +  +S S   + E+    + + L  SDH P+ + +
Sbjct: 291 RIVVSGAHMRKSVKPQSASVHNFQEEFDLDQTQALAISDHFPVEVTF 337


>gi|288942589|ref|YP_003444829.1| endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM
           180]
 gi|288897961|gb|ADC63797.1| Endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM
           180]
          Length = 255

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 54/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMG 75
           ++ L+S+N+    E    S +     +         ++   + Q  +    D+V LQE+ 
Sbjct: 3   QLNLLSYNVQAGIESRQYSDYLFQSWKHLLPHPERLTNLARIAQLLRQF--DVVGLQEVD 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           + +  +    +  +    +T+    H  R  N ++    A       +L +  P    + 
Sbjct: 61  AGSLRSSYVDQTQY---LATQGAFPHWYRQINRNLA-PFAQHSNG--LLARPRPACITEH 114

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R  V     ++  ++  + I   +  +                 Q  +L    
Sbjct: 115 RLPGLPGRGVVVAEFALDDGEVLAIGIVHLALGWN------------ARRLQLDYLSRLA 162

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                     V+ GDFN   N  G  +   ++           +  D       + R + 
Sbjct: 163 QTYP----YLVLMGDFNCGCNSKGLRNMVRRS---------GMRGLDCELKTFPSWRPRH 209

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +D+ ++                       +     LSDH PIS+  +
Sbjct: 210 NLDHILVS--------------RPIEVVAARVLDYALSDHLPISMRIE 243


>gi|218260769|ref|ZP_03475911.1| hypothetical protein PRABACTJOHN_01575 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224372|gb|EEC97022.1| hypothetical protein PRABACTJOHN_01575 [Parabacteroides johnsonii
           DSM 18315]
          Length = 353

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 76/305 (24%), Gaps = 71/305 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +      + +V++N +        ++ +               Y K L  DIV  QE 
Sbjct: 93  AASEQEGTPLTVVTYNASHFYWDRKYTMNEA------------AAYIKKLQPDIVCFQEA 140

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +   +  +                                  +   YP+   K
Sbjct: 141 PGDGYYHRDSIRYAFDYVLYKYISRRTDH----------------LPTTIYSRYPIHSVK 184

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--------------------FLDSLE 174
             + +  +  ++   V IN + I V++ H ++                       + +L 
Sbjct: 185 ALYYKNSSNMSLIADVRINNQYIRVINNHFETTSVNAYRGIITAPGKSLEIRAKAVKNLI 244

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                +    + QA  +   I     S  P ++ GDFN        +             
Sbjct: 245 LQMKDNNRKRAIQADSIYAEIR---RSPYPVIVCGDFNDTPASYTYHRV------RKGLT 295

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             F    +      + L     IDY    ++                  D  S     SD
Sbjct: 296 DGFQDAGNGYQYTFRQLYRLWRIDYVFYSESL--------------KGQDCFSPDVSYSD 341

Query: 295 HCPIS 299
           H  + 
Sbjct: 342 HNMVV 346


>gi|149197514|ref|ZP_01874565.1| hypothetical protein LNTAR_00995 [Lentisphaera araneosa HTCC2155]
 gi|149139532|gb|EDM27934.1| hypothetical protein LNTAR_00995 [Lentisphaera araneosa HTCC2155]
          Length = 266

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 85/307 (27%), Gaps = 56/307 (18%)

Query: 2   IRKYVLALVFFLVPC--TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           ++K  L L         + S+  +VR+ ++N+                         +  
Sbjct: 1   MKKLSLFLFILTTSFLISQSLNAQVRVAAYNVLYGLSGSP---------------EQIGA 45

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             +  + D++   E+ + +  A+V         Y            ++ D + +I  R  
Sbjct: 46  MFRPYNLDMIGFNEVPNGDWTARVGKVLGMKYVYV-----GKISSANHKDKYKSILSRTP 100

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                + +                 AV    EI G KI +  +H+               
Sbjct: 101 LKNTEEVALQ------GEHAWNPASAVYADTEIRGVKIRLYSLHVC-------------- 140

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
               L      L++    K++     ++ GDFN KI                   +    
Sbjct: 141 QARNLKSHIDRLREKYLSKEKKKN-IIVLGDFNDKIESPALTRLQEAGFHACWKDLNMNL 199

Query: 240 EKDSRCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           EK    N N          ID+      + K    E                  LSDH P
Sbjct: 200 EKAFTWNPNNPKSGLKEGVIDHIFYKSKSAKASKAEIIELQPP-----------LSDHKP 248

Query: 298 ISIDYDF 304
           +  + DF
Sbjct: 249 VWAEIDF 255


>gi|294651921|ref|ZP_06729210.1| exodeoxyribonuclease III [Acinetobacter haemolyticus ATCC 19194]
 gi|292822153|gb|EFF81067.1| exodeoxyribonuclease III [Acinetobacter haemolyticus ATCC 19194]
          Length = 294

 Score = 78.8 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD+V +QE   ++     
Sbjct: 34  LRVVSINVNGLRASVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTD 78

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V   +       DS  R   
Sbjct: 79  KFKPEGWYTHLFPAERAGYA----------GTAIYSRLPFVSVTNGLGFELADSQGRF-- 126

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++     + +  ++L S    D        + +      +     + Q ++ 
Sbjct: 127 ---ITAEFDLGLSHPVHIASLYLPSGSSGD-------EAQARKDVFLEEYAKILKQWRDE 176

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N     +   +                +   I      +   +E      
Sbjct: 177 NKSIIVCGDYNIVHKRIDIKNWSGNQKSSGVLPHERSWLDHIYDELGYVDTFREVRPEAE 236

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +                      + +  SDH P
Sbjct: 237 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTANAWV-----------YKEQWFSDHAP 285

Query: 298 ISIDY 302
           + IDY
Sbjct: 286 VIIDY 290


>gi|62078909|ref|NP_001014110.1| endonuclease/exonuclease/phosphatase family domain-containing
           protein 1 [Rattus norvegicus]
 gi|81883711|sp|Q5XI74|EEPD1_RAT RecName: Full=Endonuclease/exonuclease/phosphatase family
           domain-containing protein 1
 gi|53733575|gb|AAH83816.1| Endonuclease/exonuclease/phosphatase family domain containing 1
           [Rattus norvegicus]
 gi|68533864|gb|AAH99214.1| Endonuclease/exonuclease/phosphatase family domain containing 1
           [Rattus norvegicus]
 gi|149027895|gb|EDL83355.1| similar to RIKEN cDNA 2310005P05 [Rattus norvegicus]
          Length = 569

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 79/296 (26%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 FRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDKEALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDI------------HTAIAVRKK-NVRVLQQSYPL 130
             +    I  +  +         +               ++        NV +       
Sbjct: 312 CTELNQPILPNIRKWKGPRGCWRSIVAEKPSSQLQKGPCYSGFLWDTAANVELRDIPGQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +  ++           ++    + ++++ L +        ++ + S          
Sbjct: 372 SSPSNGHAKTVGPSPFLARFKVGSNDLTLVNLQLTALALPGVENSSKNHSDGHR---LLN 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     VI GDF +  +    +      +         P    +  +    
Sbjct: 429 FALTLQETLKGEKDVVILGDFGQGPDSSDYD-----ILRREKFHHLIPAHTFTNISTRNP 483

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
             +K   D   + ++  K                 I          S+HCP+  + 
Sbjct: 484 QGSKSV-DNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538


>gi|327300110|ref|XP_003234748.1| endonuclease/exonuclease/phosphatase [Trichophyton rubrum CBS
           118892]
 gi|326463642|gb|EGD89095.1| endonuclease/exonuclease/phosphatase [Trichophyton rubrum CBS
           118892]
          Length = 322

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 79/293 (26%), Gaps = 24/293 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82
            R+++ NI   +             R       L  Y   L+ +  V LQE         
Sbjct: 40  FRILTHNIRYATTSPSAGEQP-WSIRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVTDV 97

Query: 83  VFP--------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +           + W  +         +   S      A+   ++   V     P + +K
Sbjct: 98  LAGLNARPHAQADEWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQERETVWLSETPSVPSK 157

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             +  A  R     +         VL ++       D    +   S  L+      ++ +
Sbjct: 158 -GWDAASIRIVTIGVFNHKASNTTVLAMNTHL---DDQGSKSRLESAKLI---LSLIQKY 210

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANKN 250
           + +    +    +AGDFN   +     +         D+  + P       +        
Sbjct: 211 LARH-PEVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFDG 269

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 IDY ++   +    I  + +       +        SDH  +  D  
Sbjct: 270 KTKGSRIDYVMVGPQSASASIPFTVN-GYAVVPNRFDNRIYNSDHRAVVADVT 321


>gi|289522833|ref|ZP_06439687.1| endonuclease/exonuclease/phosphatase family protein [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503857|gb|EFD25021.1| endonuclease/exonuclease/phosphatase family protein [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 240

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 76/278 (27%), Gaps = 46/278 (16%)

Query: 29  WNINTLSEQEGVSLWKNSVK----RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +NI   +                 +T  ++  +  +   L+ DIV L E           
Sbjct: 3   YNIRYATGTGWDYHIPFPFWGSFRKTEKNFEDISDFLIKLNPDIVGLVESDGGTYRQNGK 62

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +            I   K    + I  A  ++ +   V+ +  P+       S    R 
Sbjct: 63  SQPVEMASKIGGTPIFGCKYHPKSFITKAPVLKLQGNAVVSKIPPIKSNIKYLSFGVKRA 122

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +E+  +       +  +HL                      +A+ L++   +   +  P
Sbjct: 123 MLEVEYD----DFVLYLVHLSLG----------------RKARAKQLEELSRKCLSADKP 162

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++AGD N             K    N +    P           +   ++ +D+ +   
Sbjct: 163 VILAGDCNTFGGEEELEPLIRKVGLKNANADCMP--------TYPSSSPRMLLDFVLHSP 214

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                              D+       SDH P+  D+
Sbjct: 215 KI--------------KVTDLLIPRVTFSDHLPLVCDF 238


>gi|239607422|gb|EEQ84409.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis
           ER-3]
 gi|327352411|gb|EGE81268.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis ATCC
           18188]
          Length = 297

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/293 (11%), Positives = 77/293 (26%), Gaps = 21/293 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        K    R       L  ++++     + LQE+        
Sbjct: 8   PLRILTHNIRY-ATSAPFRGEKPWKDRKQRLINELHYHSRHNPETFICLQEVLHVQVTDI 66

Query: 83  VFPKNT---------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +   N          W            +   S      A+   +++  V     P +  
Sbjct: 67  LSGLNPNANKDATAEWAYIGVGRDDGKQAGEFSPIFYRPAVWELEESKTVWLSETPSVP- 125

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
              +  +  R     + +    +  VL ++       D    +   +  L+         
Sbjct: 126 SRGWDASSVRIITIGVFKHIVSRKRVLGMNTHL---DDQGSKSRYEAAKLILGLINQFLT 182

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
                  ++    +AGDFN + N    +       + +D    +    +           
Sbjct: 183 KNQLAGRNINGVFLAGDFNSEENQEAYSVLTAADSQLVDAQKQVDAAFRYGSENTYTGFG 242

Query: 251 LR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                   IDY +        +      +      +    G   SDH  +  D
Sbjct: 243 YEDEGPKRIDYVLFGPQRGANM--SWIVDGYAVLPNKFDDGVLNSDHRAVVAD 293


>gi|255530398|ref|YP_003090770.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255343382|gb|ACU02708.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 370

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 93/301 (30%), Gaps = 62/301 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++++N+++       ++         S    +    +N + DI+  QE  +       
Sbjct: 106 IRMMTYNVHSFKPYGEGNI--------ESVKQQMLDLIENENPDIICFQEYFTRKKGPYD 157

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +   I            ++      T +A+  K     + +          S     
Sbjct: 158 ITDSLKRILNKPYHYFEPISQNDY--EATGLAIFSKYPIKNKGTIAFNKVYRGNS----- 210

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENT---------------------YSPSCS 182
            ++ + V +  K   + ++H++S  F +                             +  
Sbjct: 211 -SIYVDVTVKNKMFRIYNVHMQSISFQEQDYMYLDQVKYQMDPKLYASKRILVMLRNAFL 269

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             S+Q   +K  I   +   +PF+IAGDFN                    SL    KE+ 
Sbjct: 270 KRSEQVDIMKAHIKTCE---LPFIIAGDFNDTPASYAVKQMT-------KSLKNTFKEQG 319

Query: 243 SRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +      N +     IDY             ++F  + Y   +      +LSDH P+  D
Sbjct: 320 TGFGKTYNGKFPNFQIDYI---------ATTQNFDVMNYRIIEA-----KLSDHFPVRSD 365

Query: 302 Y 302
            
Sbjct: 366 L 366


>gi|170037903|ref|XP_001846794.1| carbon catabolite repressor protein [Culex quinquefasciatus]
 gi|167881236|gb|EDS44619.1| carbon catabolite repressor protein [Culex quinquefasciatus]
          Length = 409

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 94/318 (29%), Gaps = 47/318 (14%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           +    ++  ADI+ LQE+ +     
Sbjct: 86  FTVMCYNVLCDKYATRQMYGYCPSWALSWEYRKKAILDEIRHYSADIISLQEVETDQFFN 145

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131
              P+     +       + +K  S +D       AI  R     +++++          
Sbjct: 146 FFKPELKNDGYEGIFSPKSRAKTMSESDRKYVDGCAIFFRSSKFSLIKETLVEFNQLAMA 205

Query: 132 ---GAKDSFSRAGNR-----RAVELLVEINGKKIWV--------LDIHLKSFCFLDSLEN 175
              G+ +  +R   +      A+  + E   + + V        + +      +     +
Sbjct: 206 NAEGSDNMLNRVMPKDNIGLAALLKVKESAWEGLTVEQAAISQPILVCTAHIHWDPEFCD 265

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPF-------VIAGDFNRKINYLGNNDDFWKTI 228
                  +LS + + + D  +        +       V+ GDFN   +            
Sbjct: 266 VKLIQTMMLSNEIKTILDEASHSFRPGHKYDTNNVQLVLCGDFNSLPDSGVIE------F 319

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDI 285
                +    ++       +   R    IDY    +        L   S   +  N+   
Sbjct: 320 LSAGRVSMDHQDFKELGYKSCLQR---IIDYIFYSKQGMVPLGLLGPISGEWLRENKVVG 376

Query: 286 KSRGKRLSDHCPISIDYD 303
                  SDH P+ ++ +
Sbjct: 377 CPHPHIPSDHFPLLVELE 394


>gi|297380626|gb|ADI35513.1| exodeoxyribonuclease III [Helicobacter pylori v225d]
          Length = 250

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DADI  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADIFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  +++++++ +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFELFYLVNVYVPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|294828440|ref|NP_714184.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai
           str. 56601]
 gi|293386294|gb|AAN51202.2| sphingomyelinase C precursor [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 510

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 85/298 (28%), Gaps = 30/298 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++S+N+   S+++    +            LL +     + D++ L  +   NA   
Sbjct: 31  DLNILSYNLFLYSKEDIYFGY----WEEEKRAELLGKSKFTKNQDVIVLSRVFDTNARNT 86

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT-------AIAVRKKNVRVLQQSYPLLGAKD 135
           +           T+ +                      + +  K     +  Y       
Sbjct: 87  LLDNLNLEYPDQTDVIGKTKYGWDQTLGDFRQQINNGGVVILSKWPIQEKIQYIFKNHGC 146

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 N+    + ++   + I ++    +S     S         +    Q   +K +I
Sbjct: 147 GNDTFYNKGFAYVKIKKGSQIIHIVGTDTQSEDSTCSDLG-----VNARINQLTEIKKFI 201

Query: 196 T-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------- 246
             ++  +    +IAG  N   +      +    ++ N+                      
Sbjct: 202 DSKRISNKEIVLIAGALNVDKSNQSEYKNMLNILEVNEPNYAGIPFTWDTKKNKIAAYNN 261

Query: 247 -ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCPIS 299
                 +     +Y ++ +N ++  I ++ +    +    K +        SDH PI 
Sbjct: 262 IYYSWNQTSNYGEYILVSKNHFQLPIWQNLAYDPISPTTWKRKNGYTSYEFSDHFPIY 319


>gi|108563814|ref|YP_628130.1| exodeoxyribonuclease III [Helicobacter pylori HPAG1]
 gi|107837587|gb|ABF85456.1| exodeoxyribonuclease [Helicobacter pylori HPAG1]
          Length = 250

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFRGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|19075401|ref|NP_587901.1| CCR4-Not complex subunit Ccr4 (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74582584|sp|O74874|CCR4_SCHPO RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|3702632|emb|CAA21225.1| CCR4-Not complex subunit Ccr4 (predicted) [Schizosaccharomyces
           pombe]
          Length = 690

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/345 (13%), Positives = 90/345 (26%), Gaps = 57/345 (16%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           P T S   K  ++S+N+     +         +     +    L+ Q     +ADI+ LQ
Sbjct: 327 PSTTSKNLKFTIMSYNVLCERYATSTLYGYTPSWALSWSYRKDLIMQELGGYNADIICLQ 386

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKN-------- 120
           E+   N      P+ +   +       +  +  +  +       A   +           
Sbjct: 387 EVDVENYDTFFAPQMSLKGYKGVHFPKSRVRTMNEVERRIVDGCATFFKTSKYVMHEKMV 446

Query: 121 ------VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDS 172
                   + +Q   L     +     +  +V  L+E   NG ++ V + H+        
Sbjct: 447 IEYNQAPSLRRQDIKLTSNMYNRVMTKDNISVITLLENKENGSRLIVANCHIHWDPQFRD 506

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLV--------------PFVIAGDFNRKINYL 218
           ++            Q       +  K  S                P +I GDFN      
Sbjct: 507 VKVIQVAMLMDEIAQVATKFRNMPSKIPSDQLKDERPTYPEYLKIPILICGDFNSVQGSG 566

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCN--------------------ANKNLRNKIPID 258
             +     +I  N          +   N                     N     K  ID
Sbjct: 567 VYDFLSSGSISQNHEDFMNNDYGEYTVNGRSHAFNLKSAYGESEALSFTNYTPGFKGAID 626

Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +     N      + +   +   +           SDH  +  ++
Sbjct: 627 HIWYTGNSLEVTGLLKGVDKDYLSGVVGFPNAHFPSDHICLLAEF 671


>gi|291457695|ref|ZP_06597085.1| exodeoxyribonuclease III [Bifidobacterium breve DSM 20213]
 gi|291380748|gb|EFE88266.1| exodeoxyribonuclease III [Bifidobacterium breve DSM 20213]
          Length = 286

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 78/311 (25%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81
            + + + N+N +                 +    +  +A     D+  +QE+ +    V 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCMQEVRAPQDDVD 46

Query: 82  KVFPKNTWCIFYSTERLINHS----KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +    + +                     + +      + ++      ++D  
Sbjct: 47  SIFDEFGFEYATAGKIDAPADLHTMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  I V  +++ +    D            L      +     +
Sbjct: 107 S---GRWIETDVKTPEGYTITVASVYIHAGNTDD--PTKMEQKYRFLDTMLARMGALRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +D  + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +       +   +  D   +  KR 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDKRW 274

Query: 293 SDHCPISIDYD 303
           SDH P++I Y+
Sbjct: 275 SDHAPLTITYE 285


>gi|217031877|ref|ZP_03437380.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128]
 gi|298735503|ref|YP_003728024.1| exodeoxyribonuclease III [Helicobacter pylori B8]
 gi|216946529|gb|EEC25131.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128]
 gi|298354688|emb|CBI65560.1| exodeoxyribonuclease III [Helicobacter pylori B8]
          Length = 250

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFNGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|294625005|ref|ZP_06703655.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600680|gb|EFF44767.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 330

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 75/298 (25%), Gaps = 74/298 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ ++N+N ++                     L ++ +    DIV LQE+ S  +     
Sbjct: 7   KIATFNVNGIAS----------------RLPHLLEWLQREQPDIVGLQELKSTQSA---- 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGN 142
                       R   +            +A+  R      +++  P             
Sbjct: 47  ------FPEQAIRDAGYGVIWHGEKSWNGVALLARGTEPVEIRRGLPW----------DP 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +E     + V  ++L +       +  Y  +        + L        +  
Sbjct: 91  RDTQSRYLEAAIHGVVVACLYLPNGNPQPGPKFDYKLA------WFERLIRHAKTLVDLP 144

Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247
            P  + GDFN         D                 ++T+         P         
Sbjct: 145 HPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQTLLAQGWTDSLPAIHGQTPIY 204

Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +          ID+ ++++     L            D      ++ SDH P
Sbjct: 205 TFWDYFRQHFARDRGLRIDHLLLNRTLGPGLQDAGV-------DKWVRALEKASDHAP 255


>gi|213403402|ref|XP_002172473.1| inositol phosphosphingolipids phospholipase C [Schizosaccharomyces
           japonicus yFS275]
 gi|212000520|gb|EEB06180.1| inositol phosphosphingolipids phospholipase C [Schizosaccharomyces
           japonicus yFS275]
          Length = 427

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 98/323 (30%), Gaps = 63/323 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T+  A  ++++S+N   L         +   K  T     +       D DIV LQE+ S
Sbjct: 2   TSEKADNIKVLSFNCWGL---------RFVSKYRTERLHAIGVKLSECDYDIVLLQEVWS 52

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAK 134
            N        +   I  ST   + +S+   +  +   +AV  +   V      YPL G  
Sbjct: 53  IN--------DYHSIQNSTRENLPYSRFYHSAAMGAGLAVLSRYPIVETTMNKYPLNGRP 104

Query: 135 DSFSRAGN---RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            +F R      +      ++   GK I V D HL +                    QA +
Sbjct: 105 QAFWRGDWYVGKGVATASLQHPSGKIISVFDTHLHAPYGKGEDTY-----LCHRMAQAWY 159

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKD 242
           +   I    +     + AGDFN +     +N         D W ++ P+       +   
Sbjct: 160 ISKLIRAAVQRGHIVLAAGDFNFQPLTEPHNIITSYGLVSDSWLSVHPDQYKNAPSRFTL 219

Query: 243 S------------RCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILY 280
           S              + N    N             +DY     N    +  +       
Sbjct: 220 SDQELIDILGVTCDSHLNTWRANVSDKDMDDYVAKRLDYVFHSPNNTDAVSSKVV----- 274

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
             + +       SDH  I +  +
Sbjct: 275 FTEHVPKLDCSYSDHFAIEVVLE 297


>gi|71043966|ref|NP_085139.2| endonuclease/exonuclease/phosphatase family domain-containing
           protein 1 [Homo sapiens]
 gi|296434489|sp|Q7L9B9|EEPD1_HUMAN RecName: Full=Endonuclease/exonuclease/phosphatase family
           domain-containing protein 1
          Length = 569

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130
             +       +  +                         +            +       
Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSSQLQKGAGYAGFLWDAAAGMELRDAGSQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +   L S   + + S          
Sbjct: 372 SSPSNGHGKLAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +    +      I   +              + KN
Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  ++
Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 538


>gi|12697957|dbj|BAB21797.1| KIAA1706 protein [Homo sapiens]
          Length = 573

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 265 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 315

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130
             +       +  +                         +            +       
Sbjct: 316 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQE 375

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +   L S   + + S          
Sbjct: 376 SSPSNGHGKLAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 432

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +    +      I   +              + KN
Sbjct: 433 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 486

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  ++
Sbjct: 487 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 542


>gi|14042026|dbj|BAB55076.1| unnamed protein product [Homo sapiens]
 gi|41388939|gb|AAH65518.1| EEPD1 protein [Homo sapiens]
 gi|51094729|gb|EAL23976.1| KIAA1706 protein [Homo sapiens]
 gi|119614469|gb|EAW94063.1| KIAA1706 protein [Homo sapiens]
 gi|168270656|dbj|BAG10121.1| KIAA1706 protein [synthetic construct]
          Length = 569

 Score = 78.8 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 78/296 (26%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130
             +       +  +                         +            +       
Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +   L S   + + S          
Sbjct: 372 SSPSNGHGKLAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +    +      I   +              + KN
Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S+HCP+  ++
Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 538


>gi|254804108|ref|YP_003082329.1| putative DNA repair endonuclease [Neisseria meningitidis alpha14]
 gi|254667650|emb|CBA03464.1| putative DNA repair endonuclease [Neisseria meningitidis alpha14]
          Length = 259

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEA-DLS 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +                 ++ +AV  K           +G          R
Sbjct: 46  ADMKNPHGMHGYWHCA-------EKRGYSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFDRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 MEYDY 256


>gi|226289230|gb|EEH44742.1| endonuclease/exonuclease/phosphatase family protein
           [Paracoccidioides brasiliensis Pb18]
          Length = 316

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 75/311 (24%), Gaps = 38/311 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        K    R       L  + ++     + LQE+        
Sbjct: 8   PIRILTHNIRY-ATSAPFKGEKPWPYRKQPLLNELHYHTRHNPESFICLQEVLHSQLTDI 66

Query: 83  VFPKN---------------------------TWCIFYSTERLINHSKRDSNNDIHTAIA 115
           +   N                            W            +   S      +I 
Sbjct: 67  LSGLNSSPTKHSTGSTGTGSGTGTGACASAAGEWAYIGVGREDGKQAGEYSPIFYRPSIW 126

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
             +    V     P + +K  +  A  R     + + +  +  VL +        D    
Sbjct: 127 DLESFKTVWLSETPSVPSK-GWDAASPRLVTIGVFKHHASQKRVLAMSTHL---DDQGST 182

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               +  L+  Q           + ++    +AGDFN + N               D+  
Sbjct: 183 ARYQAAKLILSQINAYLSQAQLARRNINGVFLAGDFNSEENQEAYIVLTGAESSLVDAHK 242

Query: 236 RFPKEKDSRC-NANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              +       N              IDY +         +  +         +    G 
Sbjct: 243 EVEESLRYGSVNTYTGFGYEDEGPKRIDYVLFGPERGTASMPWTIE-GYAVLPNKFDDGV 301

Query: 291 RLSDHCPISID 301
             SDH  +  D
Sbjct: 302 LSSDHRAVVAD 312


>gi|164687368|ref|ZP_02211396.1| hypothetical protein CLOBAR_01009 [Clostridium bartlettii DSM
           16795]
 gi|164603792|gb|EDQ97257.1| hypothetical protein CLOBAR_01009 [Clostridium bartlettii DSM
           16795]
          Length = 215

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 99/285 (34%), Gaps = 76/285 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+NI+T ++++                  + +Y K  + DI+ LQE+         
Sbjct: 1   MKIISYNIHTGTDKDKNRT-----------LRQMAKYLKIQNCDIICLQEVL-------- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + + +     ++      + ++  +  I +  K   + +    L        +   R
Sbjct: 42  --YSQYRMLKFYLQMDGSFAENVSDKQY-GICIFSKYKILARNHVFLTS------KKEQR 92

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
               + V+I G + + V++ HL                     +Q   + ++I+   E  
Sbjct: 93  GFAHIKVKIEGDRYLNVINTHLGL-------------DKDERVKQINEILNFISINLEGN 139

Query: 203 ----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                  ++ GDFN K  Y+ N +D    ++ ++                     K  ID
Sbjct: 140 IEDLAGNIVCGDFNEKNIYMNNFNDVAVDLNKDNLPTFA----------------KNRID 183

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y  + +N              Y  D++      +SDH P+ +++ 
Sbjct: 184 YCFISENLTAK---------SYTVDEV-----YMSDHFPVIVEFS 214


>gi|154507938|ref|ZP_02043580.1| hypothetical protein ACTODO_00424 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797572|gb|EDN79992.1| hypothetical protein ACTODO_00424 [Actinomyces odontolyticus ATCC
           17982]
          Length = 271

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/309 (10%), Positives = 78/309 (25%), Gaps = 67/309 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R  +WN+N                   +    +  + +    D++ +QE+         
Sbjct: 1   MRFATWNVN----------------SIRTRVDRVIAFLERSGTDVLAMQEIKCRPD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +AV  +   +  Q +               
Sbjct: 41  ------QFPTEAFEEAGYHVAIHGLNQWNGVAVASRLPILDVQDHFPTQPAFGEPPVVEA 94

Query: 144 RAVELLVEINGK---------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           RA+ + ++              + +  +++ +   L      Y      L+  A+  + W
Sbjct: 95  RALGVTIDTTDTLPSEDRQASSMTIWSLYVPNGRELTHAHYAYK--LEWLANLAEQGRGW 152

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFW-----------KTIDPNDSLIRFPKEKDS 243
           +    +      + GD+N         D              +      +   + +    
Sbjct: 153 L---TDPSALIALVGDWNVAPMDEDVWDMSAFEGATHVSAPEREAFAAFAADGWVEVTRE 209

Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           R                   + ID+          +            D  + +GK  SD
Sbjct: 210 RVTNYTYWDYQKLRFPKNEGMRIDFAYCSPALAARVSGAQI-------DRDERKGKGASD 262

Query: 295 HCPISIDYD 303
           H P+ +D D
Sbjct: 263 HVPVIVDVD 271


>gi|228909564|ref|ZP_04073387.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 200]
 gi|228849853|gb|EEM94684.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 200]
          Length = 244

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/270 (10%), Positives = 71/270 (26%), Gaps = 63/270 (23%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +Y +   ADI  LQE+        +  +  +  +             +    ++  A+  
Sbjct: 14  EYLEESSADIFCLQEIKLQEGQIDLNLEGYYTYW-----------NYAVKKGYSGTAIFS 62

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +       +   D   R          + +  +  +++ ++  +        +   
Sbjct: 63  KKEPLSVTYGLGIEEHDQEGRL---------ITLEFEDFYMITLYTPNSKRGLERLDYRM 113

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR---------------KINYLGNNDD 223
                     + L        +     +  GD N                   +     +
Sbjct: 114 KWEDDFRSYIKRL--------DEKKTVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 165

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQES 274
            +  I     +  +     ++  A      +           +DYFV+ +     + +  
Sbjct: 166 KFTCILEEGFVDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEVK 225

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +  +             SDHCP+ +  +F
Sbjct: 226 INSEV-----------MGSDHCPVELYINF 244


>gi|224438361|ref|ZP_03659288.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818]
 gi|313144803|ref|ZP_07806996.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818]
 gi|313129834|gb|EFR47451.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818]
          Length = 251

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 76/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +   ++ADI  +QE          
Sbjct: 1   MKLISWNVNGLRACMNKGFM---------------DFFNEVNADIFCIQESKMQKD-QGD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  ++++     +          + + V  K   +       +   D   R    
Sbjct: 45  FSFQGYSEYWNSAEKKGY----------SGVVVLSKIKPLQVTYDMGISHHDKEGRI--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +    ++ ++++++  +                      + L        +   
Sbjct: 92  ------ITAEYERFYLVNVYTPNAKRELERLEYRMEWEDDFRAFVKKL--------KKHK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P VI GD N                              +  +  +  F     +   A 
Sbjct: 138 PVVICGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKMSELLESGFIDTFRHFYPTLEGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+   +    L        ++            SDHCP+ 
Sbjct: 198 SWWSYMGKARENNTGWRIDYFLCSTSLESHLKDAKIYPHIF-----------GSDHCPVG 246

Query: 300 IDYD 303
           +  D
Sbjct: 247 LSMD 250


>gi|88856446|ref|ZP_01131104.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1]
 gi|88814313|gb|EAR24177.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1]
          Length = 286

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 89/323 (27%), Gaps = 79/323 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A ++R+ S N+N +                 +    +  +    D DI+ LQE+ + +A 
Sbjct: 2   ATRLRIASVNVNGVRA---------------AYRKGMGDWLDARDIDILALQEVRAADAD 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +    + W I +        +          A+A RK +      ++ +    D F  A
Sbjct: 47  IEGLLGDGWNILHDAATAKGRAG--------VALASRKGSAASAPVAHRVALGADDFDSA 98

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G    ++   +++GK + V+  ++ S       +         +  +   L         
Sbjct: 99  GR--WLKADFDVDGKTVTVVSTYVHSGVVDTPKQVEKYKFLEAMLVRLPELAA------- 149

Query: 201 SLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR 244
                +I GD N     L   +                 F +    N   +         
Sbjct: 150 HSDHALIVGDLNVGHRELDIKNWRGNRKKAGFLLEERAYFDRIFGANGETVECVDGTTGP 209

Query: 245 C---------------NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
                                   +           IDY V                  Y
Sbjct: 210 GLGWVDVGRQFAGEIDGPYTWWSQRGQAFDTDTGWRIDYHVATPALAAS-------VADY 262

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
             D   +  +R SDH P+ +DY 
Sbjct: 263 RIDKAGAWDERWSDHAPVVVDYS 285


>gi|299768386|ref|YP_003730412.1| catabolite repression control protein [Acinetobacter sp. DR1]
 gi|298698474|gb|ADI89039.1| catabolite repression control protein [Acinetobacter sp. DR1]
          Length = 274

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD+V +QE   ++    +
Sbjct: 14  LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 58

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V  +        DS  R   
Sbjct: 59  KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSVKDGLGFELADSQGRF-- 106

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++     + +  ++L S    +        + +            + Q ++ 
Sbjct: 107 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 156

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD+N     +   +                +   I      +   +   +   
Sbjct: 157 NKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRAEAE 216

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +    +                 + +  SDH P
Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYQACSPDWKTRVANAWV-----------FKDQWFSDHAP 265

Query: 298 ISIDY 302
           + IDY
Sbjct: 266 VIIDY 270


>gi|206598220|gb|ACI16023.1| RNA-editing complex protein mp100 [Bodo saltans]
          Length = 755

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 86/303 (28%), Gaps = 31/303 (10%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLW--KNSVKRTTSDYTLLRQYAKNLDADIV 69
           F V         ++ +SWN+         +          +   Y +L +  +  DAD++
Sbjct: 470 FPVGPKPEQQTTIKFLSWNVMFDRYSGKPTPLGMPGIDWCSPQRYPVLSKVMERSDADVI 529

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            +QE+                 +  +      +     N     + V K+ V      + 
Sbjct: 530 GMQEVEPAFWAFLADQPWVKANYMFSCNKSGPAI----NPWGVLMMVHKRLVVDQLTHHN 585

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +       S         L +++NGK + V  IHL +               S  + Q  
Sbjct: 586 VPAWAGHVSLLP-----VLTIKVNGKPLHVAAIHLIAPF--------TKGRESARTGQDS 632

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKIN------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            L+  +T+        V  GDFN                + W  + P D       E ++
Sbjct: 633 ALRQRLTKSISGD--CVTMGDFNDWPTNEFIMPTDSGYTEAWPIVCPGDPGKTM-DETNT 689

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISI 300
            C            D         K L  +       NE++  +        SDH  +  
Sbjct: 690 FCRLKIEEIFFGRSDKVFYRGQRLKPLAAKMVGTKSVNEENGNTAAPAYLFPSDHYGVET 749

Query: 301 DYD 303
            + 
Sbjct: 750 TFS 752


>gi|15892951|ref|NP_360665.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7]
 gi|15620145|gb|AAL03566.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7]
          Length = 260

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +   LLR +    + DI+ LQE+    A    
Sbjct: 1   MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    +++     R
Sbjct: 41  ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + +      ++ ++  +  F+ S +     +            ++++ KK    
Sbjct: 91  F-LEIKLSLPIGFCNIISLYAPNGAFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN     +                      +TI  +     +     S+    
Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKLRTILNSGFEDLYRLMHPSKQE-F 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L            D      ++ SDH P+ 
Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255

Query: 300 IDY 302
             +
Sbjct: 256 ASF 258


>gi|326523229|dbj|BAJ88655.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 531

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 88/304 (28%), Gaps = 70/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N L        +             + + A+  D D++ LQE        +V
Sbjct: 271 LKILSWNVNGLRALVKSRGF------------SIHELAQREDFDVLCLQETKMQEKDVEV 318

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++    + ++           +   ++  A+  +   +  +    +   D+  R    
Sbjct: 319 IKESLLEGYTNSFWT-----CSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDTEGRI--- 370

Query: 144 RAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 V +     ++L  ++ +    L  L    +     L    + L+          
Sbjct: 371 ------VTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPCLGNYMKELEK--------S 416

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNA 247
            P ++ GD N     +  +D    +                      +   +++      
Sbjct: 417 KPVILTGDLNCAHQEIDIHDPAGNSRSAGFTKEERKSFETNFLSKGFVDTFRKQHPDVVG 476

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           +DYF++ ++  + +            D         SDH P+
Sbjct: 477 YSYWGYRHNCRKTNRGWRLDYFLVSESIAERIH-----------DSYILPDVSASDHSPL 525

Query: 299 SIDY 302
            +  
Sbjct: 526 GLIL 529


>gi|308064283|gb|ADO06170.1| exodeoxyribonuclease III [Helicobacter pylori Sat464]
          Length = 250

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L                         +  ++DADI  +QE    + + + 
Sbjct: 1   MKLVSWNVNGLRACMTKGFM---------------DFFNSVDADIFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  +++++++ +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFELFYLVNVYVPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSHPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|257876222|ref|ZP_05655875.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
 gi|257810388|gb|EEV39208.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
          Length = 257

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/284 (9%), Positives = 69/284 (24%), Gaps = 35/284 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++  ++N+        V    +   +       +       D D++ +QE    +  A +
Sbjct: 1   MKAATYNLR-------VDTDYDQEWQWHYRSEAVCSLIDYYDWDVLAIQEAR-PSQFADL 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    +        +         A  +       L               A +R
Sbjct: 53  AKLAQYASVTAERDGDGLGEGIGLYYQKEAFELLDSGSFWLS--LTPTEPSIHPEAAYSR 110

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V  +++      ++                +       +    + L D I +      
Sbjct: 111 LCVWAVLQEKKNPPFLAITT-------HLDNISEMARFEGMKVILEQLADQIERY----- 158

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDYF 260
           P ++ GD N +     +        +  +   +                  +    IDY 
Sbjct: 159 PVLLMGDLNAEPTERVHRYLEQHFQNAKEHGQKPHHGPKGSYQNFIYTLPWQELEEIDYI 218

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       + F+ +           +  SDH P+  +  F
Sbjct: 219 Y----------TKGFTVVKTACLTDSCDRRFPSDHFPLEAEVQF 252


>gi|325696280|gb|EGD38171.1| exodeoxyribonuclease [Streptococcus sanguinis SK160]
 gi|332362319|gb|EGJ40119.1| exodeoxyribonuclease [Streptococcus sanguinis SK1056]
          Length = 322

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/325 (12%), Positives = 88/325 (27%), Gaps = 56/325 (17%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           K VL  V             ++L+SWNI++L+        +  +         + Q  + 
Sbjct: 28  KSVLNFVIINSVNFTRKGNFMKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQA 81

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            +ADI+ +QE                   +        S R+     +       K    
Sbjct: 82  ENADIIAIQETKLSATGPTKKHLEILTDLFPDYENTWRSSREPARKGYAGTMFLYKKELT 141

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              ++P +GA  +    G      + +E +G   +V  ++  +        +      + 
Sbjct: 142 PTVTFPEIGAPSTMDVEGR----IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAK 195

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTI 228
            ++    L        +   P +  GD+N               R   +       +  +
Sbjct: 196 YAEYLATL--------DEQKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNL 247

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEI 278
                   F        N       +            IDY++        + +    + 
Sbjct: 248 LAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDS 307

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
              +           DH PI ++ +
Sbjct: 308 GARQ-----------DHTPIVMEIE 321


>gi|307317812|ref|ZP_07597250.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83]
 gi|306896574|gb|EFN27322.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83]
          Length = 285

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 78/283 (27%), Gaps = 53/283 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAV 80
             + + S+NI+     +G             D   + Q    + ADIV LQE        
Sbjct: 33  GDIVIASYNIHKCVGTDGRF-----------DPPRIAQVIAEIGADIVALQEADQRFGER 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A +              +      +  +  H  + + ++      +   L G        
Sbjct: 82  AGLLDLEHLRREAHLVSVPISPFSEKGHGWHGNVLLIREGAVSDVRQLKLPG-------V 134

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+ + +++    + V+  HL                    ++QA+ L         
Sbjct: 135 EPRGALVVDLDLKAGPLRVIAAHLGLLRHS-------------RARQAETLLK--ATADG 179

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           +  P ++ GD N         +           L        S   +  +    +P+D  
Sbjct: 180 AGRPTLLIGDLN---------EWRMGKRSSLSFLSPIFDPSHSAVASFPSRFPLLPLDRV 230

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + + +     +                  +  SDH P+    D
Sbjct: 231 LGNPHHLVTSVAV----------HDTPLARVASDHLPVKASID 263


>gi|296130666|ref|YP_003637916.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM
           20109]
 gi|296022481|gb|ADG75717.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM
           20109]
          Length = 260

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 71/304 (23%), Gaps = 80/304 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +RL ++NI                     D        + LDAD++ LQE+         
Sbjct: 1   MRLATFNILHGRSLADG----------RVDLDRFADAVRRLDADVLALQEVDRAQSRSHG 50

Query: 79  -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI----HTAIAVRKKNVRVLQQSYP 129
                  A            +           +  +        IA+  +          
Sbjct: 51  ADLTAVAADAMGAPHHRFAATLHGEPGLWVAGTGQEQPDTAAYGIALLSRRPVREWHVVA 110

Query: 130 LLGAKDS------------FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           L   +              F R   R A+  +V+  G  + V+  HL      +      
Sbjct: 111 LPALRRRTPVRFPGQRWPAFVRDEPRAALAAVVDGEGGPLTVVGTHLTFIPGWN------ 164

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                      + L+  +   +      V+ GD N               +         
Sbjct: 165 ----------VRQLRHLVRTTRRLPGACVVMGDLN---------------LAGEQPARLT 199

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +   R            +D+ +                 ++      +    LSDH  
Sbjct: 200 GMQPLVRAATFPVDAPVRQLDHVLAGPG-------------VHAAGPGDAVDLGLSDHRA 246

Query: 298 ISID 301
           + +D
Sbjct: 247 LVVD 250


>gi|126322197|ref|XP_001375523.1| PREDICTED: similar to TRAF and TNF receptor associated protein,
           [Monodelphis domestica]
          Length = 355

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 48/288 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L++WNI+ L                 +    + +Y      D+VFLQE+        
Sbjct: 106 TFSLITWNIDGLDINN-----------LQARARSVCEYLALYTPDVVFLQEV-------- 146

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  +             + +   T + ++K  V+++        A         
Sbjct: 147 ---IPPYYDYLKKRATSYRIISGNEDGYFTVVMLKKSRVKLMSHEITPFPAT-----QMM 198

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  + + V + G ++ ++  HL+S                    Q + +   + +     
Sbjct: 199 RNLLCVHVSVCGNELCLMSSHLEST----------RNHSRERMNQLKIVLKKMQE-IPES 247

Query: 203 VPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
           V  +  GD N + +             D W+ +   +   R+  +  +  N       K+
Sbjct: 248 VTVIFGGDTNLRDHEVSKVGGLPDKILDVWEFLGKPE-HCRYTWDTQANTNLAIEASCKL 306

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             D       A    I      +     +    G+  SDH  +   +D
Sbjct: 307 RFDRIFFRPAAGDCHI--IPRNLDLIGLEKLDCGRFPSDHWGLLCGFD 352


>gi|145544246|ref|XP_001457808.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425626|emb|CAK90411.1| unnamed protein product [Paramecium tetraurelia]
          Length = 239

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 70/279 (25%), Gaps = 48/279 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI              +  +      +L+   + L+AD++ LQE+         
Sbjct: 1   MRIATYNIRN------------TQDQYLKRREILQSIIQGLNADVISLQEVALPEL--DY 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F   +                AI VRK     L +   +            R
Sbjct: 47  LAGDYQKFFAPIQLQFPLHPDPEFRIDGNAILVRKGLEVKLHEYVHISVF---------R 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +++      + + + HL      D           + S Q   +  ++  +     
Sbjct: 98  NIQHIVI----GDVHIYNTHLHHVIGDD----------QVRSHQIDNILTYLLGQM--NE 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR---CNANKNLRNKIPIDYF 260
              + GDFN                       +   E            +       DY 
Sbjct: 142 RIFLMGDFNLTPESQEYKKMTHYFKSSYTLANQKEPEITFPTGLTGPFMDTDPAGTFDYI 201

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            +  N           E      D    G   SDH  I 
Sbjct: 202 WIRGN------NIEVKECTLFGSDKIQEGVYPSDHLGIL 234


>gi|19553934|ref|NP_601936.1| exonuclease III [Corynebacterium glutamicum ATCC 13032]
 gi|62391577|ref|YP_226979.1| exodeoxyribonuclease III [Corynebacterium glutamicum ATCC 13032]
 gi|145296740|ref|YP_001139561.1| hypothetical protein cgR_2644 [Corynebacterium glutamicum R]
 gi|21325513|dbj|BAC00135.1| Exonuclease III [Corynebacterium glutamicum ATCC 13032]
 gi|41326919|emb|CAF20763.1| EXODEOXYRIBONUCLEASE III [Corynebacterium glutamicum ATCC 13032]
 gi|140846660|dbj|BAF55659.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 263

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 78/300 (26%), Gaps = 60/300 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+V+WN+N                   +    +  +    D D++ +QE    +     
Sbjct: 1   MRIVNWNVN----------------SARTRVDRMVDFLLRHDVDVLAVQETKCKDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          I +       +    +A+  +      +++       +      +
Sbjct: 41  ------QFPTERFTEIGYEVAHFGLNQWNGVAIISRVGIENVETHFPAQPGFNKDITKEQ 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201
                 +      + V  +++ +   +      Y        +    L++++        
Sbjct: 95  SIEARAIGARCGGVQVWSLYVPNGREIADPHYDYK------LRWLFSLRNYVIDTLEYRP 148

Query: 202 LVPFVIAGDFNRKINYLGNNDDFW----------KTIDPNDSLIRFPKEKDSRCNANKNL 251
               V+ GDFN     +   D             +    +  +    KE           
Sbjct: 149 EEKLVLLGDFNIAPTDIDVWDIAAFEGKTHVTEPERAAFDGLIEAGLKETTPGPGTYTYW 208

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             K         + ID+ +              +      D  +  G   SDH P+ +DY
Sbjct: 209 DYKGARFLKGEGMRIDFQLASPALA-------ATAGETFVDVEERSGTGASDHAPVIVDY 261


>gi|289549078|ref|YP_003474066.1| exodeoxyribonuclease III Xth [Thermocrinis albus DSM 14484]
 gi|289182695|gb|ADC89939.1| exodeoxyribonuclease III Xth [Thermocrinis albus DSM 14484]
          Length = 261

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 78/304 (25%), Gaps = 71/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ ++N+N                   S   LL  + +    D++ LQE          
Sbjct: 4   FRVCTYNVN----------------SIRSRRELLFMWLERSQVDVICLQETKVEERA--- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     I +         +  +A+  K                      +R
Sbjct: 45  -------FPFPDFEKIGYHCYVKGQRTYNGVAICSKLPLQDV----FKDTSMDILDKESR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      IW+++++        + + TY  +      Q      ++ +      
Sbjct: 94  I-----IGGRLGDIWLINVYFPHGDLRGTPKFTYKLAFYQQFYQ------FLAENFSPED 142

Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N  +  +   D                  + I     +  F +         
Sbjct: 143 KIILLGDMNVALEDIDVYDPVLLRDTIGTMEEERSALRKILEWGFVDTF-RYLYPNKVQF 201

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                          + IDY ++ +         S  ++  +    K R  + SDH P+ 
Sbjct: 202 TWWDYIGGAVWKDQGMRIDYILVTKPLLP-----SVRDVYVDMWARKRRSPKPSDHAPVV 256

Query: 300 IDYD 303
              +
Sbjct: 257 CLLE 260


>gi|55823454|ref|YP_141895.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus CNRZ1066]
 gi|55739439|gb|AAV63080.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus CNRZ1066]
          Length = 275

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 82/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGDSARAQLSR------AVIDTLVTENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++    +   S  +     +       K       +YP +GA  +    G  
Sbjct: 55  KHLQILEDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        ++  
Sbjct: 114 -----IITLEFDTFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        +         A 
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNLLNKGFTDTYRHLNGDVTGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +I+ +  +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVIKSNMIDSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|311106414|ref|YP_003979267.1| endonuclease/exonuclease/phosphatase family protein 1
           [Achromobacter xylosoxidans A8]
 gi|310761103|gb|ADP16552.1| endonuclease/exonuclease/phosphatase family protein 1
           [Achromobacter xylosoxidans A8]
          Length = 255

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 71/255 (27%), Gaps = 39/255 (15%)

Query: 54  YTLLRQYAKNLDADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSN 107
              LR+  +    DIVFLQE+      +    + +P  +   F +     +  + +    
Sbjct: 32  LHELREALRLASPDIVFLQEVLGEHQGHAERHQAWPALSQYEFLADSLWTDFAYGRNAVY 91

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
              H   A+  +      +++ +            R  +  ++ +      V  I +   
Sbjct: 92  PAGHHGNALLSRYPIERHENHDVTVHGH-----EGRGLLHCVLRVPSLPSPVHAICVHLG 146

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                             +Q + L + +T    +  P +IAGDFN               
Sbjct: 147 LLEG-----------HRGKQLRRLCELVTDGVPADEPLLIAGDFNDWRLRAD------AL 189

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +    +   F                 + +D   +        +  +             
Sbjct: 190 MTGCGTREVFTTRLGRPARTFPARWPLLRLDRIYVRNVRDWQPVPLASRV---------- 239

Query: 288 RGKRLSDHCPISIDY 302
              RLSDH PI  + 
Sbjct: 240 -WSRLSDHVPICAEI 253


>gi|296116318|ref|ZP_06834934.1| exodeoxyribonuclease III Xth [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977137|gb|EFG83899.1| exodeoxyribonuclease III Xth [Gluconacetobacter hansenii ATCC
           23769]
          Length = 264

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 78/304 (25%), Gaps = 67/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WNIN+L  +  +                          DIV LQE         +
Sbjct: 1   MRIMTWNINSLRLRLPLLERL----------------CAENQPDIVCLQE---TKVTDDL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +                       +  +A+  +    +    P    +         
Sbjct: 42  FPLDAVQALGFPHVC------FRGMKSYNGVAILSRQPMRMLTDTPDWCDRGDCRH---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +        + V D ++ +   +       +P  +      +  + W  Q+     
Sbjct: 92  --IAVECGEGTDAVTVHDFYVPAGGDIPDPVE--NPKFAHKLAFVEEARAWFAQRDVCRT 147

Query: 204 PFVIAGDFNRKI--NYLGNNDDFWKTID-------------PNDSLIRFPKEKDSRCNAN 248
             V  GD N     + + ++    K +               +  +        +     
Sbjct: 148 VVV--GDLNIAPLEHDVWSHRQLLKIVSHTPEETSRLLAWQNSGFVDAMRHFVPADEKLY 205

Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+  +  +    L   S               ++ SDH P+
Sbjct: 206 TWWSYRNRDWSASNRGRRLDHVWVTPDLVPALRDMSV-------LRPVRDWEKPSDHVPV 258

Query: 299 SIDY 302
            +D 
Sbjct: 259 IVDL 262


>gi|227821604|ref|YP_002825574.1| putative endonuclease/exonuclease/phosphatase family protein
           [Sinorhizobium fredii NGR234]
 gi|227340603|gb|ACP24821.1| putative endonuclease/exonuclease/phosphatase family protein
           [Sinorhizobium fredii NGR234]
          Length = 285

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 81/283 (28%), Gaps = 53/283 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAV 80
             + + S+NI+     +G             D   + Q    + ADIV LQE        
Sbjct: 33  GDIVIASYNIHKCVGTDGRF-----------DPGRIAQVIGEIGADIVALQEADQRFGER 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A +              +   +  +  +  H  + + ++      +   L G        
Sbjct: 82  AGLLDLEHLRREAHLVSVPISAFSEKGHGWHGNVLLLREGAVSDVRQLNLPG-------V 134

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+ + +++    + V+  HL                    ++QA+ +         
Sbjct: 135 EPRGALVVDLDLKAGPLRVIAAHLGLLRHS-------------RARQAETILRVAAD--G 179

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           +  P ++ GD N         +           L        +   +  +    +P+D  
Sbjct: 180 AGRPTLLIGDLN---------EWRMGRRSSLSFLSPIFDPTHATVASFPSRFPLLPLDRV 230

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + + +    +   S  +            +  SDH P+    D
Sbjct: 231 LGNPHHL--VTSVSVHDTPL--------ARVASDHLPVKASID 263


>gi|89074807|ref|ZP_01161261.1| putative exported phosphatase [Photobacterium sp. SKA34]
 gi|89049382|gb|EAR54944.1| putative exported phosphatase [Photobacterium sp. SKA34]
          Length = 342

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 98/354 (27%), Gaps = 72/354 (20%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           K+V+    F V   +  AQ++ ++SWN      Q+G          +      +      
Sbjct: 7   KHVITAALFSVSTFSIQAQELSVMSWNSWVGPTQDGF---------SKKHAKRVAHDVAA 57

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-------------I 110
           +  D+    E      + +        +          S RD++                
Sbjct: 58  IKPDVYVSIETYGKGHLLRKAFAKAHHVNTDDIYYYTISCRDNDGKPTFQGMCKEGIHGD 117

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           + AI      V V      +     +    G      + +++NG+ +WV+D  L S    
Sbjct: 118 NLAIMSIYPIVDVKVVRDAIEYPHVNDWNFG-----AVKLDVNGQFVWVVDTWLDSANSS 172

Query: 171 DSLENTYSPSCSL------------------LSQQAQWL-KDWITQKKES--LVPFVIAG 209
           +S+ +    +                        QA+ + + WI +   +    P ++AG
Sbjct: 173 ESILDDLYEAARHDGSIDNEKIVQIIQRDKVRLNQAREIVEQWIPELIANADQEPVILAG 232

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-------------CNANKNLRN--- 253
           D N       +  +                   +               +  K+      
Sbjct: 233 DHNTSPRLDWSPKNKDMHFGITIPYQVSKIFTKAGFKDAFREMHPNVLTHTGKSWSPQGG 292

Query: 254 ---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 IDY     +  + L   +   I     +  +     SDH  +   + F
Sbjct: 293 DIAPNRIDYIYYKGSKLQALESVTIDSIAAGTTNDTT-----SDHSAVFARFKF 341


>gi|116747688|ref|YP_844375.1| endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116696752|gb|ABK15940.1| Endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans
           MPOB]
          Length = 258

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 82/285 (28%), Gaps = 53/285 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                  + S+N +     +              D     +  + LDADI+ LQE+ +  
Sbjct: 11  PNEASFTVASYNTHRCVGIDR-----------KYDPERTARVIRELDADIIGLQEIDAGF 59

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             ++   +    +  +T   + +         H    +      V  +   L     S  
Sbjct: 60  YRSQGSRQLE-RLADATGLNVVNGPTKRGTGGHYGNVLLTSRKVVGVRRIDL-----SVY 113

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R A+++ ++++G+ + V+ +HL                     +Q   L       
Sbjct: 114 GREPRGAIDVDLDVDGEIVRVMVVHLGLGGL-------------ERRRQVNRLLH--GCS 158

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            E     V+ GD N            W  +      +     K        +    + +D
Sbjct: 159 SEQEQLHVVLGDINE-----------WFPLGRPLHRLHRHFGKSPARRTFPSFLPVLALD 207

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +       L++ S  + + +        +  SDH PI     
Sbjct: 208 RIWVKP--LDALMEISVHDTVLS--------RVASDHLPIKATIT 242


>gi|328853940|gb|EGG03075.1| hypothetical protein MELLADRAFT_109522 [Melampsora larici-populina
           98AG31]
          Length = 267

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 58/213 (27%), Gaps = 24/213 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L ++NI          L +      ++   L+       + DI+  QE+  +  +  +
Sbjct: 10  LKLATYNIRYSPTNSHPILPEAP---WSTRLPLILNQLNWEEPDIIGAQEVLDHQFIDLL 66

Query: 84  --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +                +     +       +        P +    S+    
Sbjct: 67  EGLHQLGYTGIGVGRDDGKRLGEYAPIFWKSDQFELVDHHYFWLSEEPDVPGSISWDSGQ 126

Query: 142 NRRAVELLVEINGKKIWVL-------------DIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            R    + ++     + V               I + +  F D        S  L+  +A
Sbjct: 127 TRMVTCVELKPKLNTVQVDGIFQLPGQNSLDRSIFVMNTHFDDRGSYAREQSAKLICYRA 186

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           + L        ++  P  + GD N     L   
Sbjct: 187 EALIK------KTSKPVFLLGDLNSTPEELPYK 213


>gi|23335380|ref|ZP_00120616.1| COG0708: Exonuclease III [Bifidobacterium longum DJO10A]
 gi|189439121|ref|YP_001954202.1| exonuclease III [Bifidobacterium longum DJO10A]
 gi|239621234|ref|ZP_04664265.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|189427556|gb|ACD97704.1| Exonuclease III [Bifidobacterium longum DJO10A]
 gi|239515695|gb|EEQ55562.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 286

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 79/311 (25%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81
            + + + N+N +                 +    +  +A     D+  +QE+ +    V 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEDWAGKHAPDVWCIQEVRAPQDDVD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +    + +     +               + +      + ++      ++D  
Sbjct: 47  SIFDEFGFEYATAGKIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  I V  +++ +                 L    + +     +
Sbjct: 107 S---GRWIETDVKTPEGYAITVASVYVHAG--NTDYPTKMEQKYRFLDTMLKRMGALRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +D  + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +       +   +  D   +  KR 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDKRW 274

Query: 293 SDHCPISIDYD 303
           SDH P++I Y+
Sbjct: 275 SDHAPLTITYE 285


>gi|307566413|ref|ZP_07628850.1| exodeoxyribonuclease III [Prevotella amnii CRIS 21A-A]
 gi|307344885|gb|EFN90285.1| exodeoxyribonuclease III [Prevotella amnii CRIS 21A-A]
          Length = 249

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 78/302 (25%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G +                 +    LDAD   LQE          
Sbjct: 1   MKFISWNVNGLRACVGKNFK---------------EEFLALDADFFCLQETKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  K+  +       +   D   R    
Sbjct: 45  LSFPGYESYWN----------YADKKGYSGTAIFTKHTPLSVSRGIGIEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                   Q     + ++    +   
Sbjct: 91  -----VITLEMADFYLVTVYTPN-------SQDQLKRLPYRMQWETDFQSYL-HSLDKHK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
           P ++ GD N     +   +      +                +      +          
Sbjct: 138 PVIVCGDMNVAHEEIDLKNPKSNHFNAGFSDEEREKMTTLLSNGFTDTFRFLYPEQVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++     + L +      +             SDHCP+ I
Sbjct: 198 WWSYRFKAREKNIGWRIDYFLISDRLRESLEEAKIHTEIL-----------GSDHCPVEI 246

Query: 301 DY 302
             
Sbjct: 247 IL 248


>gi|291234349|ref|XP_002737107.1| PREDICTED: deoxyribonuclease I-like 3-like [Saccoglossus
           kowalevskii]
          Length = 446

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 88/305 (28%), Gaps = 31/305 (10%)

Query: 4   KYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
             VL L++     T     + +RL ++N+                        +L++   
Sbjct: 11  CLVLVLLYMATGHTKGSEIKDLRLSAFNVQVFG---------QMKASDPLVMDVLKKIIL 61

Query: 63  NLDADIVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               D++ +QE+      A+ ++  +            I+     +++    A   R  +
Sbjct: 62  RN--DVILIQEIRDSSETAILRLLAEINRASDNKYSIEISDRLGRTHSKEQYAFFYRTDS 119

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V + +  +   G + + +    R    +        +    +        D        +
Sbjct: 120 VNMTESYHYDDGEEQNGTDEFEREPFIVRFSSPSTAVSDFVMVAIHTKPDD--------A 171

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
              +        D +++        +I GDFN   +Y+ + D  +  +  +        +
Sbjct: 172 VKEIDYLTDVYDDIVSRWNIED--VIILGDFNAGCDYVKSKDWNYIRLRTDKRFTWLIDD 229

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           ++    A+         D  V+         +             D    +   +SDH P
Sbjct: 230 REDTTVASTFCAY----DRIVIGGTTLEGAVWPKSSRVLYFDEKFDLTDDQAAAVSDHYP 285

Query: 298 ISIDY 302
           +    
Sbjct: 286 VEFKL 290


>gi|282897774|ref|ZP_06305773.1| hypothetical protein CRD_01893 [Raphidiopsis brookii D9]
 gi|281197453|gb|EFA72350.1| hypothetical protein CRD_01893 [Raphidiopsis brookii D9]
          Length = 257

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 66/282 (23%), Gaps = 34/282 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ ++++N+       G   W             +    +N   ++   QE   +     
Sbjct: 2   QITVMTFNLRCDKPDPGERCW-------QKRVGAIACMIQNYQPELWGTQEGQPHQLRDL 54

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +      +R                    ++         P +    ++     
Sbjct: 55  QVLLPDYEFVG-GDRTGTGKGEHCAIFYKRGKLQLRETQDFYLSDTPEIPGSITWGTRLP 113

Query: 143 RRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           R        +   G  + +++ HL               S  L++   +           
Sbjct: 114 RMVTWANFMVEDLGFSVTIMNTHLDHEVSRARELGAGLVSLRLMNFPME----------- 162

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++ GDFN     L             D L   P E     +           D  
Sbjct: 163 --DYLLLTGDFNAGPKSL-ERIILADNYRIRDVLGNLPLESQKTFHDFTGQAWDAR-DTI 218

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             D           +       DD +  G   SDH P+ +  
Sbjct: 219 YCDHR---------WQINHVIIDDQRWEGIWPSDHFPVIVKL 251


>gi|229083666|ref|ZP_04215990.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
 gi|228699629|gb|EEL52290.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
          Length = 263

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 70/269 (26%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF------------YSTERLI 99
                L +  +  D D++ LQE+        V        F                 ++
Sbjct: 18  EKIRHLAKTIQEEDYDVIALQEVSQSIKAQNVCDNKKKDNFGLILLTELEKLGLGNYNIV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     IA+  K   V Q S+ +  ++D+      R+ V   +   GK I  
Sbjct: 78  WDFSHIGYDIYEEGIAIITKYPIVKQGSFFVSASQDTTYWK-TRKIVHATISYQGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L +++           + GDFN   +  G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVNRLIEYVN----GDELSFLMGDFNNNAHLRG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              D+       D+     ++ +      K            ID                
Sbjct: 183 EGYDYLIRKGLYDTYELAMEKDEGTTVQGKIAGWDENKQNLRIDLIF---------TNRP 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +             +SDH  + +  D
Sbjct: 234 KKVLSSKVIFNGVNRNVISDHFGVEVQLD 262


>gi|229820609|ref|YP_002882135.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
 gi|229566522|gb|ACQ80373.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
          Length = 382

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/267 (9%), Positives = 78/267 (29%), Gaps = 31/267 (11%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
             +  +   ++DAD++ + E     A+ +   +     +     +  + +R     I   
Sbjct: 129 IRMTARVVHDVDADVLAVIEAEDRPALLRFDAELLGDHYRHLMLVDGNDER----GIDVG 184

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           +  +         S+  +  +D+     +R   +  V      +  + ++          
Sbjct: 185 LLTKPGFPIGAIHSH--VDTEDAVGLVFSRDCAQYEVTTPSGTVIQVLVNHF-------- 234

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           ++          +QA+ ++  + +        V+ GD N     +G        +  +D 
Sbjct: 235 KSQSGGGGERRRRQAEAVRAIVDELVAVGEHVVVLGDLNEGSPAVGQVPVSLAALFESDG 294

Query: 234 -----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-------- 280
                      +   R     +   +  +DY ++ +                        
Sbjct: 295 PLVSCFDLDGFDVGPRPGTFDSCGIRNRLDYILLSRGLAARFTSGRVFRTGLWGTRVTRP 354

Query: 281 ----NEDDIKSRGKRLSDHCPISIDYD 303
                  ++ +   + SDH  + ++ D
Sbjct: 355 TAWETYPEMLTGTHQASDHAALVVELD 381


>gi|88608769|ref|YP_506301.1| exodeoxyribonuclease III [Neorickettsia sennetsu str. Miyayama]
 gi|88600938|gb|ABD46406.1| exodeoxyribonuclease III [Neorickettsia sennetsu str. Miyayama]
          Length = 265

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 76/305 (24%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                        +     + + D++ LQE+    +    
Sbjct: 7   LKVATWNVN----------------SIRQRAEAVSALLVSENLDVLLLQELKCQES---- 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          ++++        +  +A+  +           +  +  +      
Sbjct: 47  ------DFPLHVFNDLSYNVILKCQKGYNGVAIASRWPITKISDEIYMDGEARY------ 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E ++    K I ++ I++ +     S    Y        Q    L   I     +  
Sbjct: 95  --IEGVISFFDKCIRLISIYIPNAQAAGSPRFEYK------MQFHDALARRIHGYLLNNN 146

Query: 204 PFVIAG-DFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
             ++ G D N     +   D                  + +        F + K      
Sbjct: 147 DIMLLGGDMNAAPEDIDVYDPVKLDGCTGFHIEERSKLRELLNLGLFDTF-RMKYPTKQE 205

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +         + ID+ +        L+                   R SDH P+
Sbjct: 206 FSWWDYRGGGLQRNEGMRIDHILASAEGMDHLLDCYI-------LKELRHISRPSDHVPV 258

Query: 299 SIDYD 303
               +
Sbjct: 259 VCVLN 263


>gi|305666045|ref|YP_003862332.1| hypothetical protein FB2170_07175 [Maribacter sp. HTCC2170]
 gi|88710820|gb|EAR03052.1| hypothetical protein FB2170_07175 [Maribacter sp. HTCC2170]
          Length = 332

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 86/319 (26%), Gaps = 50/319 (15%)

Query: 25  RLVSWNINTLSE--QEGVSLWKNSVK---------RTTSDYTLLRQYAKNLD-------A 66
            +  +N+  L +   + ++   +            R       + +    +         
Sbjct: 14  TIAFYNVENLFDIENDSLTFDDDRTPNGKDKWTQTRYLQKIENISKVLSRIGSVTSKTSP 73

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQ 125
           DI+ L E+ +   +  +               I H      + I  A+  +K   +    
Sbjct: 74  DIIGLCEIENITVIEDLINHPN---LRDKNYGIVHFDSPDESGIDVALIYKKGSFLPTTF 130

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           QS  LL   +   R   R  + +   ++ ++I+ +  H  S    ++       + + L+
Sbjct: 131 QSRRLLLQNEDGDRDYTRDQLVVGGLLDDEQIYCIVNHWPSRSGGETRSKPNRIAAAKLN 190

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-----NNDDFWKTIDPNDSLIRFPKE 240
              + + D I +  +S    +  GD N                  K ++         K 
Sbjct: 191 ---KRIIDSIQRM-DSSAKIISMGDLNDDPIDDSLKKILKTKGKKKKLEDQSLFNPMEKL 246

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKF-------------------LIQESFSEILYN 281
            +    +          D      N  +                      +  +    + 
Sbjct: 247 YNKGVGSLAYRDKWNLFDQIFFTANLLEKKDDSYRFWKVNAFTAPFLYTKKGKYKGYPFR 306

Query: 282 EDDIKSRGKRLSDHCPISI 300
                S     SDH PI +
Sbjct: 307 TYAGGSYLGGYSDHLPIYM 325


>gi|302388430|ref|YP_003824252.1| exodeoxyribonuclease III [Clostridium saccharolyticum WM1]
 gi|302199058|gb|ADL06629.1| exodeoxyribonuclease III [Clostridium saccharolyticum WM1]
          Length = 251

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 74/302 (24%), Gaps = 78/302 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++SWN+N L                         Y K +DAD+  +QE           
Sbjct: 3   KMISWNVNGLRACVEKGF---------------LDYFKEMDADVFCIQESKLQEG-QIDL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++      +S                          PL  A    +   +R 
Sbjct: 47  TLPGYHQYWNYAEKKGYSGTALFTKEK-----------------PLSVAYGINAEEHDRE 89

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              +  E    + +V+  +  +                        +  ++ +  E   P
Sbjct: 90  GRVIAAEYP--EYYVVTCYTPN-------SQNELARLPYRLTWEDAVLAYLKK-LEEKKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +  GD N                         + +  +  +  +  +      +     
Sbjct: 140 VIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKFTVLLESGFIDTYRYFYPEQEGIYS 199

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + ++    L   +    +             SDHCP+ +
Sbjct: 200 WWSYRFSARKKNAGWRIDYFCVSESLKDRLASAAIHTEVL-----------GSDHCPVEL 248

Query: 301 DY 302
             
Sbjct: 249 VI 250


>gi|294102135|ref|YP_003553993.1| Endonuclease/exonuclease/phosphatase [Aminobacterium colombiense
           DSM 12261]
 gi|293617115|gb|ADE57269.1| Endonuclease/exonuclease/phosphatase [Aminobacterium colombiense
           DSM 12261]
          Length = 359

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 83/305 (27%), Gaps = 39/305 (12%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
              VLA+VF  +   AS A  + + ++NI   +     +   +         + L +   
Sbjct: 1   MTSVLAVVFLSI---ASQAMALSIGTFNIEYFNVSGKNAYSPS-------HCSSLAKTIT 50

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
              A+++ LQE+     +     K      Y+              D  T   +   +  
Sbjct: 51  TSQANVLALQEIEGDATMRFFVTKFLPGWKYAGNDTGGRQNLYFLWDTATIKLLDGPSAY 110

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFC--FLDSLENTYS 178
               S+   G     +    R  +      +   ++  ++++HLKS      D  E    
Sbjct: 111 GANASFRFEGKSYRLND---RPHLVGTFLDKEGNRRFTLVNVHLKSQSIRGKDDKERAER 167

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + +    Q   +   +T  K    P  I GD+N                  N       
Sbjct: 168 YNKAKRQAQIAGINKLVTTLKG---PVFILGDYNT-----------------NTPSGTSF 207

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DY     N  K      +              +   DH  +
Sbjct: 208 PLSGLGEGHYSYDNMNSNLDYIGFT-NVGKTASWTLYKVETAIASRSTKSTQHP-DHDIV 265

Query: 299 SIDYD 303
            +  D
Sbjct: 266 VLSLD 270


>gi|289614581|emb|CBI58653.1| unnamed protein product [Sordaria macrospora]
          Length = 626

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/337 (10%), Positives = 89/337 (26%), Gaps = 75/337 (22%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQE 73
            ++   + + + ++N+  L+              T++    +           D++F+QE
Sbjct: 290 VSSGTCKGLTVGTYNVENLAP-------------TSAHMPKVASQIVTYLKSPDLLFIQE 336

Query: 74  MGSYNAVA------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           +                         K     T+    + E + +        +I TA  
Sbjct: 337 VQDDTGATDDGVVSANKTLTTLISAIKTAGGPTYDFV-TIEPVNDQDGGQPGGNIRTAYL 395

Query: 116 VRKKNVRVLQQS---------------------------YPLLGAKDSFSRAGNRRAVEL 148
                + +  ++                            P      + +    R+ +  
Sbjct: 396 YNPSVLTLSLKNGGSNPGSSTDANEVLIDSLTGAPSLKYNPGRIDPSNAAWEATRKPLVA 455

Query: 149 LV--EINGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESL 202
               +   K  + +++H  S     S+     P    +    ++QA+    +I++  ++ 
Sbjct: 456 EWIAKDGSKSFFTVNVHFSSKGGGTSVHGDVRPPINGAVEKRTEQAEITAKFISKILKAD 515

Query: 203 --VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                + AGDFN            + ++     L                  N   +D+ 
Sbjct: 516 PAARVIAAGDFNEFAFVKPL--TTFASVSGLKELDEALNTPVENRYTYSYDMNAQALDHM 573

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            +         +              +    +SDH P
Sbjct: 574 YISPVLASSKSKFQHVH----VSSWVAASAVVSDHDP 606


>gi|319902391|ref|YP_004162119.1| exodeoxyribonuclease III Xth [Bacteroides helcogenes P 36-108]
 gi|319417422|gb|ADV44533.1| exodeoxyribonuclease III Xth [Bacteroides helcogenes P 36-108]
          Length = 267

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 82/303 (27%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N+N L                        ++      D++ LQE          
Sbjct: 14  MKIITYNVNGLRAAVTKGFP---------------EWLAQEQPDVLCLQETK-------- 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +           H    +    ++ +A+  K      +    +   DS  R    
Sbjct: 51  LQPEQYPADALDSLGYKHYLYSARKKGYSGVAILAKREPDRVEYGMGMEEYDSEGRF--- 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + ++ ++  S    D  +       +      +  ++++ + + +  
Sbjct: 108 ------LRADYDDLSIVSVYHPSGTSGDERQ-------AFKMVWLEKFQEYVLELQRTRP 154

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  +D                W T   +       +          
Sbjct: 155 KLILCGDYNICHEPIDIHDPIRNATNSGFLPEEREWMTRFLDAGFTDSFRFLHPDKQEYT 214

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++++     L          +           SDHCP+ +
Sbjct: 215 WWSYRFNSRARNKGWRIDYCMVNEPVRPMLKDARILNDAVH-----------SDHCPMLL 263

Query: 301 DYD 303
           +  
Sbjct: 264 EIT 266


>gi|307638182|gb|ADN80632.1| Exo deoxyribonuclease III [Helicobacter pylori 908]
 gi|325996778|gb|ADZ52183.1| Exodeoxyribonuclease III [Helicobacter pylori 2018]
 gi|325998370|gb|ADZ50578.1| Exodeoxyribonuclease III [Helicobacter pylori 2017]
          Length = 250

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGIDMEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VITCEFESFYLVNVYTPNSQQALSRLSYRMSWEMEFKKFLKVLEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERKKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKDIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|302783529|ref|XP_002973537.1| hypothetical protein SELMODRAFT_99746 [Selaginella moellendorffii]
 gi|300158575|gb|EFJ25197.1| hypothetical protein SELMODRAFT_99746 [Selaginella moellendorffii]
          Length = 306

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 91/310 (29%), Gaps = 65/310 (20%)

Query: 15  PCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           P +    + + +++SWN+N L                  + + L + A + D D++ LQE
Sbjct: 28  PSSLPSEKNLVKVISWNVNGLRA------CMKRKNELEEEGSALARLADSEDFDVLCLQE 81

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                   +   +     + ++          ++   ++  A+  +   +       +  
Sbjct: 82  TKLQEKDVEAIKQKILGGYSNSFWT-----CSTSKLGYSGCALISRIKPLSVTYGLGISQ 136

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLK 192
            D   R         +V       +++ +++ +    L+ L    +      S     L+
Sbjct: 137 HDGEGR---------VVTAEFDTFFLVSVYVPNSGQRLERLTYRTTEWDPAFSTYLLELE 187

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRF 237
                      P ++ GD N     +   D                 ++T   +  L+  
Sbjct: 188 KR--------KPVIVTGDLNCAHEEIDIYDPDGNKRSAGFTSEERTSFQTNFIDKGLVDT 239

Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
            +++            +           +DYF++ Q     +            D     
Sbjct: 240 FRKQHPLAVGFTYWSYRSNARPQNKGWRLDYFLVSQGLVCSVA-----------DSYVLP 288

Query: 289 GKRLSDHCPI 298
               SDHCPI
Sbjct: 289 QLDGSDHCPI 298


>gi|294102589|ref|YP_003554447.1| exodeoxyribonuclease III [Aminobacterium colombiense DSM 12261]
 gi|293617569|gb|ADE57723.1| exodeoxyribonuclease III [Aminobacterium colombiense DSM 12261]
          Length = 261

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 78/300 (26%), Gaps = 71/300 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                   S   +L Q+  +   D++ LQE  + +     
Sbjct: 2   LKIATFNVN----------------SVRSRMHILSQWLHDNRVDVLCLQETKTEDQF--- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S    + +         +  +A+   +  +        G +   +    R
Sbjct: 43  -------FPASEFEALGYEAVFKGEKAYNGVALLSLHPIMNPHFGLEDGEEPDPATRIVR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V          + +++ ++     +D  +  Y        +    LK    ++     
Sbjct: 96  GTVL--------GVHIINTYVPQGKSIDHSDYQYK------MRFFDRLKTLFDREYSKAD 141

Query: 204 PFVIAGDFNRKINYLGN------------NDDFWKTIDP--NDSLIRFPKEKDSRCNANK 249
             +  GD N     +              ++D  K  +       I   ++         
Sbjct: 142 DLLWVGDMNVAPTDIDVTNPGNKRDHVCFHEDIKKKFEEIKAWGFIDVFRKYRPGEGEFS 201

Query: 250 NLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               +            ID+ +   +                 D      ++ SDH P+ 
Sbjct: 202 FFDYRVKNALERNIGWRIDHILATSSLAHRSEDCYV-------DRGPRGWEKPSDHAPVV 254


>gi|84498021|ref|ZP_00996818.1| exodeoxyribonuclease III [Janibacter sp. HTCC2649]
 gi|84381521|gb|EAP97404.1| exodeoxyribonuclease III [Janibacter sp. HTCC2649]
          Length = 269

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/271 (11%), Positives = 70/271 (25%), Gaps = 52/271 (19%)

Query: 59  QYAKNLDADIVFLQEMG-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           ++     AD++ LQE+  S + +  V  +     ++ +                  +AV 
Sbjct: 21  EWLAMQHADVIALQEVRASDDQLRDVLAQGGLAQWHVSSAQGRTKGHA-------GVAVL 73

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +   +   S           R      +E+ V      + V+  ++ +   L   ++  
Sbjct: 74  TRQPPLRVSSDLGPQEFADAGRW-----LEVDVRGPEGPVTVISTYVHTGEALTPKQDEK 128

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------------- 223
                   +    +   +     +    V+ GD N   +     +               
Sbjct: 129 -------FRFLDAVGSRLADLAVNDGYAVLTGDLNICHSADDLKNWKGNVGKAGFLPEEQ 181

Query: 224 --FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
               + +                         +           IDY        K    
Sbjct: 182 AHLDRWVGALAYADVHRALHGPGPGPYTWWSWRGKAFDNDAGWRIDYHFASAPLAKLAT- 240

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   +     +  +R SDH P+++DYD
Sbjct: 241 ------RADVGRASTYAERWSDHAPLTVDYD 265


>gi|325123873|gb|ADY83396.1| catabolite repression control protein [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 274

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 82/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD+V +QE   ++    +
Sbjct: 14  LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 58

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V  +        DS  R   
Sbjct: 59  KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSVKDGLGFELADSQGRF-- 106

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++     + +  ++L S    +        + +            + Q ++ 
Sbjct: 107 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 156

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD+N     +   +                +   I      +   +   +   
Sbjct: 157 NKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAE 216

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +     I                + +  SDH P
Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTINAWV-----------YKDQWFSDHAP 265

Query: 298 ISIDY 302
           + IDY
Sbjct: 266 VIIDY 270


>gi|167950326|ref|ZP_02537400.1| exonuclease III [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 272

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 76/312 (24%), Gaps = 73/312 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+N N +                      L+Q  +  D D++ +QE    +     
Sbjct: 1   MKIVSFNTNGIRT----------------REHQLQQLKQRHDPDVIGIQESKVQD----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          +  +        H  +A+  K   +  Q     G       A  R
Sbjct: 40  -----QDFPLEMTSALGFNAGYFGQKTHYGVALLSKQAPLSLQK----GFPGDPVDAQRR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +       G ++ V+   L +        +    S S           ++ Q      
Sbjct: 91  MIIGRFATDKGNQVTVIKWLLPAGVRTSLTRSNIRLSASSTPI----CSLYLQQHHSPDD 146

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             ++ GD N     L                         ++ + +        F     
Sbjct: 147 NLLVIGDMNIAPLDLDIGIGPDNAKRWLKSGKCCFLPEEREWLQRLTDWGLHDTFRGHYP 206

Query: 243 SRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +       +             ID  +   +                 D      ++
Sbjct: 207 EVDDRFSWFDYRSRGFDREPKRGLRIDLILASASLNAACSDAGI-------DYEIRGMQK 259

Query: 292 LSDHCPISIDYD 303
            SDHCPI  ++D
Sbjct: 260 PSDHCPIWAEFD 271


>gi|157964331|ref|YP_001499155.1| exodeoxyribonuclease III [Rickettsia massiliae MTU5]
 gi|157844107|gb|ABV84608.1| Exodeoxyribonuclease III [Rickettsia massiliae MTU5]
          Length = 292

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+ A     DI+ LQE    +++   
Sbjct: 22  MKIVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVADSL--- 62

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       S    +  +A+  K       S  L  +         R
Sbjct: 63  ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 109

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +I     +V           D  +   +       +  + +++W+T  +    
Sbjct: 110 HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 162

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N   +                         +  +    +             
Sbjct: 163 KMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNVLGFIDSSRHFVSLDTKF 222

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L          +           SDH P
Sbjct: 223 YTWWSYRNIDWKKSNKGRRLDHIWVSDNLKDAL-------FSMHLLPEARDWSPPSDHVP 275

Query: 298 ISIDYD 303
             + ++
Sbjct: 276 YFVTFN 281


>gi|154757658|gb|AAI51788.1| DNASE1L3 protein [Bos taurus]
          Length = 295

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 91/293 (31%), Gaps = 32/293 (10%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +   A  +++ S+N+ +  E +  +              ++ +  K    DI+ L E+  
Sbjct: 14  STHSALALKICSFNVRSFGESKKANCNA---------MDVIVKVIKRC--DIILLMEIKD 62

Query: 77  YN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            +      + +    N+         + +   R++      A   ++K V V +QSY   
Sbjct: 63  SSNRICPTLMEKLNGNSRKGITYNYVISSRLGRNTY-KEKYAFLYKEKLVSV-KQSYLYH 120

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +   +   +R    +  +     +    I                 S   + + A   
Sbjct: 121 DYQAGDADVFSREPFVVWFQSPYTAVKDFVIVPLHTTPET--------SVREIDELADVY 172

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            D   +       F+  GDFN   +Y+         +  +   +    +++     N   
Sbjct: 173 TDVKRRWNAEN--FIFMGDFNAGCSYVPKKAWKDIRLRTDPKFVWLIGDQEDTTVKNSTN 230

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
                I   +  QN    ++ +S     + +    S  K L  SDH P+    
Sbjct: 231 CAYDRI--VLRGQNIVNSVVPQSNLVFDFQKAYRLSESKALDVSDHFPVEFKL 281


>gi|325954395|ref|YP_004238055.1| exodeoxyribonuclease III Xth [Weeksella virosa DSM 16922]
 gi|323437013|gb|ADX67477.1| exodeoxyribonuclease III Xth [Weeksella virosa DSM 16922]
          Length = 255

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 85/301 (28%), Gaps = 66/301 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                 +    L ++ +  + DI  +QE  +      +
Sbjct: 1   MKIISYNVNGIRA---------------ALRKGLTEWLRVANPDIFCVQETKAQPEQVDI 45

Query: 84  --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +  ++ + +   +S     + I                    +G    +    
Sbjct: 46  SEIQALGYTAYWHSAQRKGYSGVAIFSKIQPKNV--------------EIGTGIDYIDHE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     ++ ++  +  V+ ++L S   ++   +     C       + LK  I     +
Sbjct: 92  GR-----VIRLDFDQFSVISLYLPSGTNMEERLDFKLQFCEDFLNYIRNLKQNIPNLVIA 146

Query: 202 LVPFVI---------AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
               +            +           D   + ID  + +  +        +      
Sbjct: 147 GDYNICHEAIDIHDPICNAKVSGFLPVERDWMTRFIDQCEMIDSYRFFVKEP-HHYTWWS 205

Query: 253 NK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +           IDY ++       + +        +           SDHCPI ++ +
Sbjct: 206 YRANARANNKGWRIDYHMVSHQLKNNIKRVGILTEAKH-----------SDHCPILVELE 254

Query: 304 F 304
           F
Sbjct: 255 F 255


>gi|288962170|ref|YP_003452465.1| hypothetical protein AZL_d00950 [Azospirillum sp. B510]
 gi|288914436|dbj|BAI75921.1| hypothetical protein AZL_d00950 [Azospirillum sp. B510]
          Length = 333

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/328 (12%), Positives = 99/328 (30%), Gaps = 52/328 (15%)

Query: 21  AQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
           A  + R+ ++N+ TL +      +             LR   + L+ADI+ LQE+ + + 
Sbjct: 2   ADTLFRIATFNLETLDDDADDPPF-------EERIATLRPQLERLEADILCLQEIDAQHP 54

Query: 79  ---------AVAKVFPKNTWCIFYSTERLINHSKR------DSNNDIHTAIAVRKKN--V 121
                    A+A++     +  ++ T                S   I  A  +R      
Sbjct: 55  VKSAPRILRALARLLDGTRYAGYHVTAGDAPSPADRHNPVIVSRWPIRAARLLRHHLVPP 114

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFC-FLDSLENTYSP 179
             ++ +              +R  +   +E  +G+ + V ++HL++        +   + 
Sbjct: 115 VRVRLATADPAPDTETEVGWDRPVLHAELEMPDGRVLHVFNLHLRAPIAAPVPGQKAGAQ 174

Query: 180 SCSLLSQQAQ------------WLKDWIT----QKKESLVPFVIAGDFNRKINYLGNNDD 223
           S    +  A+             L+  +        +     ++AGD N  +        
Sbjct: 175 SWKTAAGWAEGFYLASIKRAGQALETRMAVDRLFDADPEALILVAGDCNADLEQTAVRII 234

Query: 224 FWK-------TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                      +             + R     +    + +D+ +      + L Q +  
Sbjct: 235 RAAPDFTGNPALANRVLEPLEQAIPEERRYTVLHGGTPVLLDHLLASPRLAEGLRQVAIH 294

Query: 277 EILYNEDDIKSRGKRL-SDHCPISIDYD 303
                ++   + G    S H P+   + 
Sbjct: 295 NEDLTDEVDHADGPSPVSYHAPVVAGFS 322


>gi|227547961|ref|ZP_03978010.1| extracellular nuclease [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079972|gb|EEI17935.1| extracellular nuclease [Corynebacterium lipophiloflavum DSM 44291]
          Length = 1044

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 95/347 (27%), Gaps = 66/347 (19%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQ----------------------EGVSLWKNSVKRTT 51
           +    SV  +  + S+N+                            +       S +   
Sbjct: 480 LAVPDSVGGEYSIASFNVLNYFTSLGEDVAGCNSYKDMYGNPVTARDCDVRGAYSQQAFE 539

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYSTERLIN 100
                +      LD  ++ L+E+ +             A+ K+                 
Sbjct: 540 DQQAKIVNAINRLDVSVLGLEEIENTYAVTGDVARRDEALGKLVDALNAAGGNWAYAESP 599

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NGKK 156
                  + I  A    +  V  +  S        + +    R+ +    +     + K 
Sbjct: 600 AELGTDEDVIRVAFIYNESEVEPVGASRIFDDPAFTGTA---RQPLAQEFKPVGADDSKS 656

Query: 157 IWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDF 211
              +  H KS   + + +         +  +   Q+  L D + ++ + +  P  I GD 
Sbjct: 657 FVAIVNHFKSKGSVANGDADTGDGQGNNAQVRVAQSTALIDALKEQDDWANKPTFIVGDL 716

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N       + +D  + ++         + +     + +       +D+ + +  A   + 
Sbjct: 717 N-----SYSREDAVRYLEQEGFSNIASRREFDNA-SYQFAGQLGSLDHVMGNAAATALVQ 770

Query: 272 QESFSEILYNEDDIKSRGKR---------------LSDHCPISIDYD 303
             +   I  +E       +R                SDH P+ + ++
Sbjct: 771 DAAVWNINADESIAFEYSRRNYNVQDFFEANNPFRSSDHDPVKVGFN 817


>gi|332687227|ref|YP_004457001.1| exodeoxyribonuclease III [Melissococcus plutonius ATCC 35311]
 gi|332371236|dbj|BAK22192.1| exodeoxyribonuclease III [Melissococcus plutonius ATCC 35311]
          Length = 254

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 71/304 (23%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L      +                      LDAD   +QE          
Sbjct: 1   MKCISWNVNGLRAIVKKNFIY---------------VFNELDADFFCVQETK-LQDGQID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++       +S                             G          R
Sbjct: 45  LELPGYHQYWDYAIKKGYSGVAVFAK--------------EAAQKVYYGLNMEEHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     ++++ +  +               +         +D++ + K    
Sbjct: 91  L-----LTLEYPNFYLVNCYTPNSQP-------ELKRLAYRMTWENAFRDYLIKLKSKKQ 138

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                   +     +    +  N  +  +      +    
Sbjct: 139 -VILCGDLNVAHQPIDLKNWRTNQHSAGFSPEEREKMTKLLDNGFIDTYRYFYPDKEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++  N    L + +                  SDHCP+ 
Sbjct: 198 SWWSYRFNARKNNAGWRIDYFIVSDNLKPTLKEATI-----------YTEITGSDHCPVG 246

Query: 300 IDYD 303
           ++ D
Sbjct: 247 VELD 250


>gi|152979786|ref|YP_001351880.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille]
 gi|151279863|gb|ABR88273.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille]
          Length = 259

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 84/309 (27%), Gaps = 80/309 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +++VS N+N +        +                +    DAD + +QE+   + +   
Sbjct: 2   LKIVSANLNGIRSAAKKGFFT---------------WMAKHDADFICVQELKAQAPDMTP 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      +  ++       +S                         +  +G   S   A 
Sbjct: 47  EFLTPPGYTGYFHYAEKKGYSGAGVYCKT--------------VPDHVQIGFGCSEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V+ +  K+ V+ ++  S    +  +        +       L       K  
Sbjct: 93  GRY-----VQCDFGKLSVISVYCPSGSSSEERQLAKFRFMDVFLPHLLEL-------KAQ 140

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              FVI GD+N   N                         +  D    +  + +   +  
Sbjct: 141 GRDFVICGDWNIAHNEIDLKNFKGNRKNSGFLPEERAWLSRVFDEVGLVDVYRRLHPTTT 200

Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   N+           IDY V      +     +             + +R SDH
Sbjct: 201 EECYTWWSNRGQAYAKNVGWRIDYQVATPALAETARSAAI-----------YKDERFSDH 249

Query: 296 CPISIDYDF 304
            P++IDYD+
Sbjct: 250 APLTIDYDW 258


>gi|146323277|ref|XP_754988.2| DNA lyase Apn2 [Aspergillus fumigatus Af293]
 gi|129558370|gb|EAL92950.2| DNA lyase Apn2 [Aspergillus fumigatus Af293]
 gi|159128003|gb|EDP53118.1| DNA lyase Apn2 [Aspergillus fumigatus A1163]
          Length = 648

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/349 (11%), Positives = 76/349 (21%), Gaps = 82/349 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-----------LDADIVFLQ 72
            R+ +WN+N +        W+ +      D   +                 L+ADIV  Q
Sbjct: 3   FRITTWNVNGIRNPFSYEPWRGNRT-FEVDLPKVLHSLNERLIIEQSMFDILEADIVVFQ 61

Query: 73  E--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR----------KK 119
           E  +   +    +     W  ++S  +    +S         T   +R            
Sbjct: 62  ETKIQRKDLRDDMVLVPGWDCYFSLPKTKKGYSGVVIYTRNATCCPIRAEEGLTGVLCPP 121

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--FLDSLENTY 177
           N  V  +  P       +        +E+       +   + +   +F    + S  N  
Sbjct: 122 NSSVSFRDLPEEQQIGGYPTIKQLSELEIDAATLDSEGRCVILEFPAFVLLGIYSPANRD 181

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------------------- 216
               +        +   I           + GD N                         
Sbjct: 182 ESRDNFRHSFIDLMDARIRNLVAMGKRVFVTGDLNIAKGELDAAHATEAIRKGAITEDEF 241

Query: 217 -YLGNNDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNL---------RN 253
                   F + +                            R                  
Sbjct: 242 ISAPARRVFNQLLSDGRVIGQRDEGRESPVLFDICRSFHPGRRGMYTCWEQRIIARPGNY 301

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              IDY +   +   +    +              G   SDHCP+   +
Sbjct: 302 GARIDYVLCSLDMQDWFSDSNIQ-----------EGLMGSDHCPVYAVF 339


>gi|160885290|ref|ZP_02066293.1| hypothetical protein BACOVA_03289 [Bacteroides ovatus ATCC 8483]
 gi|156109640|gb|EDO11385.1| hypothetical protein BACOVA_03289 [Bacteroides ovatus ATCC 8483]
          Length = 519

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 83/281 (29%), Gaps = 54/281 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R++++NI   +  + V            +Y         ++ D+V LQE+      +
Sbjct: 49  GNLRVLTFNIRHCAGNDDVI-----------NYDRTAAVINGMEPDVVCLQEVDYMTTRS 97

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +       +                     +  K   +  ++YPL G       A 
Sbjct: 98  NKVDQLKTLADKTGMNHYFSKSIA-YQGGEYGNGLLFKGTPISTKTYPLPG-------AE 149

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R A     E       V+  HL                 +   + A+ L D        
Sbjct: 150 LRSAAIAEFE----NYVVISTHLAL-------------EENNRVESAKQLTDLAKTY--- 189

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
                +AGDFN  +     N  F+  +     ++   +       A K       ID+ V
Sbjct: 190 NKVVYMAGDFNEDL----MNGTFFTELKKEWEVVSSTENTFPTGQATK------RIDFVV 239

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +     +++ +    L   +   +     SDH P+  D+
Sbjct: 240 TLKTPPTTVVKSNVIYNLDGVNVAIT-----SDHYPLYCDF 275



 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 72/251 (28%), Gaps = 43/251 (17%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           DY    +    ++ADIV LQ +      ++   +    +          +K         
Sbjct: 309 DYDRTGRIIAKMNADIVCLQGLDKETERSEGIDQLN-VLAQKANMHDYFAKVIDYKGGEF 367

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + +  K   V    Y          ++  R A+ +  E    K  V   +       D+
Sbjct: 368 GVGILTKEEPVSVDRYQ------MAGKSEMRAAMVVEYE----KFVVASTNF------DT 411

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                  +   L  +                P  + G FN          +F++ +  N 
Sbjct: 412 DMAKRIEALQTLETKLSAYNK----------PAFLLGYFN----EGDLESEFFQMVKSNW 457

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +L+   K  +           K  +D+ V  ++    + Q    E L   D         
Sbjct: 458 NLLSADKSTEVS-------GKKRRLDFIVSLKSHNVNVTQADVIESLSGVDVTV-----A 505

Query: 293 SDHCPISIDYD 303
           S H P+  D+ 
Sbjct: 506 STHYPLFCDFS 516


>gi|253999039|ref|YP_003051102.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4]
 gi|253985718|gb|ACT50575.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4]
          Length = 244

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 82/283 (28%), Gaps = 53/283 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+ +NI+     +G             D   +    + LD D   +QEM +  +    
Sbjct: 4   MRLLCFNIHGGRSLDG-----------QRDLQRIHHLMQRLDIDAGVIQEMETRPS-RGG 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +   +                        +  +   V      L+   ++      R
Sbjct: 52  QPNDVERVAGPERPFHLICPSMLEGQGWYGNLIVSRYPIVRG----LIHNLETRPSLEPR 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A + L+      + V+  HL             S S      +A+ L   I   +E   
Sbjct: 108 MAADALIAGPHGNLRVIGTHL-------------SLSIYERRSEARNLIRLIQAVEEETK 154

Query: 204 -PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNKIPIDYFV 261
            P ++ GD N             + +D               C     +L   + +D   
Sbjct: 155 SPLLLMGDINEWQ----RPSALLRFLDG--------HLTPVPCKATFPSLCPVLRLDRVW 202

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      E      +  D   +  +RLSDH PI I+ ++
Sbjct: 203 Y--------EAEGIKITAHRID--GNDIRRLSDHLPIVIELEW 235


>gi|169334284|ref|ZP_02861477.1| hypothetical protein ANASTE_00682 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259001|gb|EDS72967.1| hypothetical protein ANASTE_00682 [Anaerofustis stercorihominis DSM
           17244]
          Length = 251

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 77/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LV+WN+N L                         +   +D+DI  +QE          
Sbjct: 1   MKLVTWNVNGLRACVNKGFM---------------DFFNEVDSDIFSVQETKLQKG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++       +          +  A   K   +  +     G ++       R
Sbjct: 45  MDIPGYEEYWDYAEKKGY----------SGTATFSKIKPISVK----TGLEEEKFSKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  ++++++  +        +         +     L        + + 
Sbjct: 91  -----VITAEYENFYLVNVYTPNSQNELKRLDYRMEWEDYFADYLCEL--------DKVK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                   D   ++     +  +           
Sbjct: 138 PVIMCGDLNVAHREIDLKNPKTNKKNAGFTIEERDKMTSLLKRGFVDSYRYLYPDIEGVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++       +            D         SDHCP+ 
Sbjct: 198 TWWSYRFNARKNNAGWRIDYFIVSDRIKDKIK-----------DVKIFSDVMGSDHCPVL 246

Query: 300 IDYD 303
           +D +
Sbjct: 247 LDIE 250


>gi|168016300|ref|XP_001760687.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688047|gb|EDQ74426.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 431

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 78/297 (26%), Gaps = 47/297 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++S+N+    E   +           +    +          +VF QE+     + +
Sbjct: 161 DLTVLSYNV-WFREDLEL----------QARLDAIGNVILQHRPHVVFFQEV--TETIYR 207

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F + +W      +       R   +       V  K   V  +  P   +         
Sbjct: 208 IFEQASW-----WKSYNCSVNRRVASQRAYFCMVLSKLPVVSFRQSPFRNS------IMG 256

Query: 143 RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R      +++ NG ++ V + HL+S C      N      +    QA+     +      
Sbjct: 257 RELCLAELDVGNGARLLVANSHLESPCPAPPTWN--QMFSAERVAQAKEAMLMLKDFPN- 313

Query: 202 LVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
               +  GD N      G     +  F   +        F  +  +    +     +  +
Sbjct: 314 ---VIFGGDMNWDEKTDGVPPLPSGWFDAWVQLRPGEDGFTYDTKANKMISGYRSLRKRV 370

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK------------SRGKRLSDHCPISIDY 302
           D        +  +  E        +                      SDH  + +  
Sbjct: 371 DRMFCQLEDFDTVSIEMVGTEPIPDLTYPKEKKVKGKVEIIRYPVLPSDHFGLLLTL 427


>gi|168061234|ref|XP_001782595.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665915|gb|EDQ52584.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 614

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/353 (11%), Positives = 93/353 (26%), Gaps = 68/353 (19%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + +    ++S+N+  +  +  E  S         T     L +      ADI+ LQE+ 
Sbjct: 254 TATSGTFTVLSYNVLSDLYATSEQYSYCPPWALAWTYRRQNLLREIVAYRADILCLQEVQ 313

Query: 76  SYNAVAKVFPKNTWCIF--YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------ 127
           S +      P+     +     ++               A   R+    ++++       
Sbjct: 314 SDHYEDFYAPELEKHGYTGVYKKKTGEVYTGSVYVIDGCATFFRRDRFSLVKKYEVEFNK 373

Query: 128 ---------YPLLGAKDSFSRAGNRRAVELLVEINGK-----KIWVLDIHLKSFCFLDSL 173
                     P            +  A+ +++E            V     +  C  ++ 
Sbjct: 374 AAQSLSEALIPSTKKAALSRLLKDNVALIVVLEARDTGGFMDPQAVSGKRGQLLCVANTH 433

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGN------------ 220
            +       +   Q   L   + +    + +P ++AGDFN       +            
Sbjct: 434 IHANQELKDVKLWQVHTLLKGLEKIAASADIPMLVAGDFNSVPGSAPHCLLSTGSVDPSH 493

Query: 221 --------------------------NDDFWKTIDPNDSLIRFPKEKDSRCN----ANKN 250
                                       +F + I    ++ +  +  D         N  
Sbjct: 494 PDLQVDPLNILRPASKLCHSLPLVSAYAEFGRLIGNGPTVEKQRRRMDPTTWEPQFTNCT 553

Query: 251 LRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +DY     +      + E   E    +D      +  SDH  +  ++
Sbjct: 554 RDFLGTLDYIFYTADSLSVESLLELLDEDSLRKDTGLPSPEWSSDHIALLAEF 606


>gi|150008138|ref|YP_001302881.1| hypothetical protein BDI_1504 [Parabacteroides distasonis ATCC
           8503]
 gi|149936562|gb|ABR43259.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 628

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 85/310 (27%), Gaps = 66/310 (21%)

Query: 1   MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M + ++ A+V    +P   ++AQ         +R++S+NI      + V+          
Sbjct: 10  MRKWFIWAIVMIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 59

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D   +      +  D+V +QE+ S    +            +      ++     +   
Sbjct: 60  -DLGRIADAICKVAPDVVAVQEVDSVTGRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 117

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K   V  +   L G      R   R  + +  E    +      HL       
Sbjct: 118 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 164

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                   S  +L ++A +          +  P  IAGD+N   +           I   
Sbjct: 165 ---EDRMLSLPILRREAAF----------AHKPLFIAGDWNATAHSP--------FITEI 203

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               +                    +DY        +   + S                 
Sbjct: 204 SKDFQLLSNPKQATFPASTPD--SCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 252

Query: 292 LSDHCPISID 301
            SDH P+  +
Sbjct: 253 ASDHRPVVTE 262


>gi|326565908|gb|EGE16069.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis
           103P14B1]
 gi|326571929|gb|EGE21934.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis BC8]
 gi|326577941|gb|EGE27805.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis O35E]
          Length = 249

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 79/285 (27%), Gaps = 50/285 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + + + S+NI+             S          ++      + DI+ LQE+   N   
Sbjct: 2   KSITITSYNIH----------KGMSPTNRLVRLMGMKDALLKTNPDILCLQEVQGQNLKR 51

Query: 82  KV----FPKNTWCIFYSTER--LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +    FP      ++        ++ K       H   AV  ++        P      
Sbjct: 52  TIDFTEFPDGGQHEWFGEFLGIASSYGKNAEYEHGHHGNAVLSRHPL-----DPKHNLNI 106

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           + +R   R  +   V  +G +  V+ +                       +Q Q ++D+I
Sbjct: 107 TVNRLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRD-----------RIKQYQAIRDYI 155

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                +    ++AGDFN             + +        F +               +
Sbjct: 156 -FTLPADASLILAGDFNDWSKKSC------QALSSLGLSEVFLQVHGEYPATFPAKMPVL 208

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +D   +       L   +                 LSDH PIS 
Sbjct: 209 SLDRIYVR-----RLKVHNAMVH------GGVPWSNLSDHLPISA 242


>gi|332674310|gb|AEE71127.1| exodeoxyribonuclease III [Helicobacter pylori 83]
          Length = 250

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQD 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGRM--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V    +  ++++++  +     S  +          +  + L+           
Sbjct: 92  ------VTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|326569254|gb|EGE19315.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis BC7]
 gi|326575442|gb|EGE25367.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis
           101P30B1]
          Length = 249

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 79/285 (27%), Gaps = 50/285 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + + + S+NI+             S          ++      + DI+ LQE+   N   
Sbjct: 2   KSITITSYNIH----------KGMSPTNRLVRLMGMKDALLKTNPDILCLQEVQGQNLKR 51

Query: 82  KV----FPKNTWCIFYSTER--LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +    FP      ++        ++ K       H   AV  ++        P      
Sbjct: 52  TIDFAEFPDGGQHEWFGEFLGIASSYGKNAEYEHGHHGNAVLSRHPL-----DPKHNLNI 106

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           + +R   R  +   V  +G +  V+ +                       +Q Q ++D+I
Sbjct: 107 TVNRLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRD-----------RIKQYQAIRDYI 155

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                +    ++AGDFN             + +        F +               +
Sbjct: 156 -FTLPADASLILAGDFNDWSKKSC------QALSSLGLSEVFLQVHGEYPATFPAKMPVL 208

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +D   +       L   +                 LSDH PIS 
Sbjct: 209 SLDRIYVR-----RLKVHNAMVH------GGVPWSNLSDHLPISA 242


>gi|296112314|ref|YP_003626252.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis RH4]
 gi|295920008|gb|ADG60359.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis RH4]
 gi|326561824|gb|EGE12159.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 7169]
 gi|326563256|gb|EGE13523.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis
           46P47B1]
 gi|326563370|gb|EGE13635.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis
           12P80B1]
 gi|326576470|gb|EGE26378.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis CO72]
          Length = 249

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 79/285 (27%), Gaps = 50/285 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + + + S+NI+             S          ++      + DI+ LQE+   N   
Sbjct: 2   KSITITSYNIH----------KGMSPTNRLVRLMGMKDALLKTNPDILCLQEVQGQNLKR 51

Query: 82  KV----FPKNTWCIFYSTER--LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +    FP      ++        ++ K       H   AV  ++        P      
Sbjct: 52  TIDFAEFPDGGQHEWFGEFLGIASSYGKNAEYEHGHHGNAVLSRHPL-----DPKHNLNI 106

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           + +R   R  +   V  +G +  V+ +                       +Q Q ++D+I
Sbjct: 107 TVNRLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRD-----------RIKQYQAIRDYI 155

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                +    ++AGDFN             + +        F +               +
Sbjct: 156 VT-LPADASLILAGDFNDWSKKSC------QALSSLGLSEVFLQVHGEYPATFPAKMPVL 208

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +D   +       L   +                 LSDH PIS 
Sbjct: 209 SLDRIYVR-----RLKVHNAMVH------GGVPWSNLSDHLPISA 242


>gi|47087383|ref|NP_998586.1| DNA-(apurinic or apyrimidinic site) lyase [Danio rerio]
 gi|33416367|gb|AAH55545.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Danio rerio]
          Length = 310

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 73/304 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ SWN++ L      +                  + +  D DI+ LQE       
Sbjct: 52  AANMKITSWNVDGLRAWVKKNG---------------LDWVRKEDPDILCLQE---TKCA 93

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K  P +   +    E    +     + + ++ +A+  K   +        G        
Sbjct: 94  EKALPADITAM---PEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVT----YGIGKEEHDK 146

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     ++       +++  ++ +        +               L        +
Sbjct: 147 EGR-----VITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGL--------D 193

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +  P V+ GD N                         + +  +        F +    + 
Sbjct: 194 ARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQA 253

Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            A                  +DYFV+       L                      SDHC
Sbjct: 254 YAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNT-----------AMGSDHC 302

Query: 297 PISI 300
           PI++
Sbjct: 303 PITL 306


>gi|218439253|ref|YP_002377582.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
 gi|218171981|gb|ACK70714.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
          Length = 262

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/283 (9%), Positives = 67/283 (23%), Gaps = 31/283 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+++NI                         +     +   D++  QE  ++  +   
Sbjct: 3   LKLITFNIRY-------DKPDPDDHNWKVRRKAIASVITHYSPDLIGTQEGKAHQLLDLH 55

Query: 84  FPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                +            ++  S   +                    P     +S+    
Sbjct: 56  RMLPHYQSVGGDRTGTRSNEHCSIFYHSQRLNCLETGDFFLSETPEIP-GSITESWGNPH 114

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     + +   +   ++  +     +          S       A+ + + ++Q   +
Sbjct: 115 PRMVTWAIFQGLDEPKKIILFNTHLDYY----------SEKARELGAKLIYERLSQLDVT 164

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--IDY 259
                +  DFN     +          +         +       +  +   +    ID 
Sbjct: 165 DTYLFVTADFNATPETVTRKTFETPLPEGRQLDDALAQLPLEDQKSFNHFTEEATDAIDT 224

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              D                   D  K  G   SDH P+  ++
Sbjct: 225 IYYDSR---------VKLQNAFVDRQKWEGVIPSDHFPVIGEF 258


>gi|317374848|sp|A0MTA1|APEX1_DANRE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; Short=zAP1
 gi|117549778|gb|ABK35081.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
 gi|117549788|gb|ABK35082.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
 gi|117549790|gb|ABK35083.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
 gi|117549792|gb|ABK35084.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
          Length = 310

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 77/304 (25%), Gaps = 73/304 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ SWN++ L      +                  + +  D DI+ LQE       
Sbjct: 52  AANMKITSWNVDGLRAWVKKNG---------------LDWVRKEDPDILCLQE---TKCA 93

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K  P +   I    E    +     + + ++ +A+  K   +        G        
Sbjct: 94  EKALPAD---ITGMPEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVT----YGIGKEEHDK 146

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     ++       +++  ++ +        +               L        +
Sbjct: 147 EGR-----VITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGL--------D 193

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +  P V+ GD N                         + +  +        F +    + 
Sbjct: 194 ARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQA 253

Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            A                  +DYFV+       L                      SDHC
Sbjct: 254 YAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNT-----------AMGSDHC 302

Query: 297 PISI 300
           PI++
Sbjct: 303 PITL 306


>gi|55962497|emb|CAI11781.1| novel protein (zgc:66204) [Danio rerio]
          Length = 310

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 77/304 (25%), Gaps = 73/304 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ SWN++ L      +                  + +  D DI+ LQE       
Sbjct: 52  AANMKITSWNVDGLRAWVKKNG---------------LDWVRKEDPDILCLQE---TKCA 93

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K  P +   I    E    +     + + ++ +A+  K   +        G        
Sbjct: 94  EKALPAD---ITGMPEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVT----YGIGKEEHDK 146

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     ++       +++  ++ +        +               L        +
Sbjct: 147 EGR-----VITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGL--------D 193

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +  P V+ GD N                         + +  +        F +    + 
Sbjct: 194 ARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQA 253

Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            A                  +DYFV+       L                      SDHC
Sbjct: 254 YAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNT-----------AMGSDHC 302

Query: 297 PISI 300
           PI++
Sbjct: 303 PITL 306


>gi|311032107|ref|ZP_07710197.1| endonuclease/exonuclease/phosphatase [Bacillus sp. m3-13]
          Length = 264

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 79/270 (29%), Gaps = 42/270 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLI 99
                + +  K    D++ LQE+               N    V  +    +  S   L+
Sbjct: 18  EKIQHIARAIKEQAYDVIALQEVSQSIDAQVVKGNIKQNNFGLVLQQELEKLGVSDYELV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  ++      S+ +  + DS      R+ V + VE+ G+++  
Sbjct: 78  WDFAHMGYDTFEEGLAILTRHSIKKTHSFFVSKSTDSDFWK-TRKIVGVTVEVQGEEMSF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL  +   +               Q + L + +        P+ + GDFN   +  G
Sbjct: 137 YTCHLGWWSDEEEPA----------KYQMKQLIEKVK----GTEPYFLLGDFNNSAHIKG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCN------ANKNLRNKIPIDYFVMDQNAYKFLIQE 273
              +F  +            EKDS              +  + ID  +            
Sbjct: 183 EGYEFLTSTAGLHDTYLLASEKDSGVTVEGKIAGWDENKQDLRIDLILAS---------S 233

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             S             + +SDH  + +  +
Sbjct: 234 PPSVTSSKVVFNGQNREVVSDHYGVEVTLE 263


>gi|269796071|ref|YP_003315526.1| exodeoxyribonuclease III Xth [Sanguibacter keddieii DSM 10542]
 gi|269098256|gb|ACZ22692.1| exodeoxyribonuclease III Xth [Sanguibacter keddieii DSM 10542]
          Length = 266

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 64/303 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V + + N+N +                      + ++      +I+ LQE+ + + + + 
Sbjct: 2   VTIATANVNGVRAAYRNG---------------MGEWLAERKPEILLLQEVRATDEILEG 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +             +      +A+         +     G  +     G  
Sbjct: 47  LLGEGWNSVHQAC----------DIKGRAGVAIATTLPFAAVRVGLGNGEPEVPVDTGRW 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              ++ +  +G+ + V+ +++ S        +             + +   + +  +S  
Sbjct: 97  VEADIEL-PSGEVLTVVSVYIHSGTAGTPKMDQK-------FAHLEKVDARLRELMDSGR 148

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N     +   +                +         +    +         
Sbjct: 149 HVVVGGDVNIAHQNVDIKNWKGNLKSAGFLPEERAYLDRWFEAGWVDLGRRHGGEGPGPY 208

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +      +              D   S   R SDH P+ 
Sbjct: 209 TWWSNRGQSFANDAGWRIDYQLSTPALAELASNVHV-------DRADSYEARWSDHAPLL 261

Query: 300 IDY 302
            DY
Sbjct: 262 ADY 264


>gi|118475279|ref|YP_892840.1| exodeoxyribonuclease III [Campylobacter fetus subsp. fetus 82-40]
 gi|118414505|gb|ABK82925.1| exodeoxyribonuclease III [Campylobacter fetus subsp. fetus 82-40]
          Length = 252

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 75/304 (24%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L    G   +                +      D + LQE+         
Sbjct: 1   MKLISWNVNGLRAALGKESF---------------SWLDEHKPDFLALQEIK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++            N S   +    ++ +           +S      +         
Sbjct: 38  VSEDKIPAEIYNLGFENISANSAKRPGYSGVMSLSNLKSQNLKSQFFDDDEGR------- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E     I + +I+  +    D          +           +I        
Sbjct: 91  -----VLEHKFDNIHLFNIYFPNGQSGDER-------LAYKMDFYDKFLSYINALVSEGK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GD N                    L     +   +  +  +  F      + NA 
Sbjct: 139 GVIFCGDVNTAHREIDLKNPKANSKTSGFLPIERAWIDKVIDSGFIDTFRFINGDKENAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +  N    L      + +             SDHCP+ 
Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISSNLKDKLKDAFILDSI-----------EGSDHCPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|304388714|ref|ZP_07370772.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091]
 gi|304337278|gb|EFM03454.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091]
          Length = 259

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 47  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFGRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKALSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 MEYDY 256


>gi|261749295|ref|YP_003256980.1| exodeoxyribonuclease III [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497387|gb|ACX83837.1| exodeoxyribonuclease III [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 256

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 76/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           ++++S+NIN +                      L  + K+   D++ LQE+         
Sbjct: 1   MKIISYNINGIRSGINKG---------------LLHWIKSYQPDVLCLQEIKASKEQIKT 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F    +  ++            +    ++ + +  K     +  +   G         
Sbjct: 46  SLFDHLGYYHYWFP---------STKRKGYSGVGILCK----EKPHHIEYGIGIESIDTE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     ++ I+ KKI V+ +++ S               +      +    +I + ++ 
Sbjct: 93  GR-----VLRIDLKKISVISLYIPSGKH-------LKNRLNFKFYFMENFFSYIKKIQKK 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247
           L   VI GD+N   + +  +D                W +   N   I   +      N 
Sbjct: 141 LKDLVICGDYNICHHEIDIHDPIRNRKISGFLPEERKWMSNFLNLGFIDSFRNYVKEANH 200

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDY ++ ++  K + +                    SDHCP 
Sbjct: 201 YSWWSYYSNAKKNNKGWRIDYAMVSRSLKKKMNKA-----------YLLPEIPYSDHCPT 249

Query: 299 SIDYD 303
            ++ +
Sbjct: 250 VLEIE 254


>gi|169335183|ref|ZP_02862376.1| hypothetical protein ANASTE_01591 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257921|gb|EDS71887.1| hypothetical protein ANASTE_01591 [Anaerofustis stercorihominis DSM
           17244]
          Length = 357

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 107/320 (33%), Gaps = 63/320 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTT--------SDYTLLRQYAKNLDADIVFLQE 73
            ++ ++++N+   ++      + +  KRT          +   + Q  KN  +D+VFLQE
Sbjct: 54  DELSVLTYNLGYCNDSADSDFFMDGGKRTRIESKDKVIRNMKGIEQNIKNNKSDVVFLQE 113

Query: 74  MGSYN----------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           ++     +++     + + I +   D    +   I         
Sbjct: 114 VDEKSKRAYGVNEVKYLSDNLNGSSYFAKNFSCKYIPYPFPDMIGGVEAGIVTVSPYKVS 173

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVE--LLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
             + Y L  A     R     R  +   + ++ + K++ ++++H++++            
Sbjct: 174 DAKRYSLPVAFKYPIRVCQMKRCLLVERVKIKNSDKELVLVNLHMEAY-----------D 222

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------RKINYLGNNDDFWK--TIDPN 231
                 +Q + L D++ ++ +     +  GDFN          Y   ND ++   T++ +
Sbjct: 223 DGEGKKKQTKVLTDFLNKEYKKGNYCIAGGDFNQNFPNADNKKYPIINDKYFTPGTLNLD 282

Query: 232 DSLIRFPKEKDSRCNA----------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                +    D               N        ID F++  N     ++         
Sbjct: 283 AFSKDWTFAVDDSLPTSRLLNEEYDENSKNTQLYVIDGFILSPNVKLKKVK--------- 333

Query: 282 EDDIKSRGKRLSDHCPISID 301
                      SDH P+ I+
Sbjct: 334 ---TIDTKFNYSDHNPVRIE 350


>gi|84515771|ref|ZP_01003132.1| exodeoxyribonuclease III, putative [Loktanella vestfoldensis SKA53]
 gi|84510213|gb|EAQ06669.1| exodeoxyribonuclease III, putative [Loktanella vestfoldensis SKA53]
          Length = 262

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/306 (10%), Positives = 68/306 (22%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       L+ Q  +    DI+ LQE  S   +  
Sbjct: 2   PFTLATWNIN----------------SVRLREELVLQMLREEQPDILCLQECKSPVDL-- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                          L            +  +A+  K       +        +      
Sbjct: 44  -------IPVAQFHALGYTHMVARGQKGYNGVAIISKLPLQEAGAEDYAALGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   +E     + + + ++ +    D  +   +            ++D         
Sbjct: 93  ---VAARLENG---VTIHNHYVPAG--GDIPDRAVNAKFGNKLDYLTDMRD--AYHASRP 142

Query: 203 VPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRCNA 247
              ++ GD N          +    K +                   +   ++   + N 
Sbjct: 143 QKSILVGDLNIAPREDDVWNHKALLKVVSHTPIEVDHFGQVMDAGGWVDVTRQDIPQGNL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +             +           + SDH P
Sbjct: 203 YSWWSYRSPDWDAADKGRRLDHVWATPDISGAAHGSRVLRHV-------RGWDKPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFASFD 261


>gi|295086350|emb|CBK67873.1| Endonuclease/Exonuclease/phosphatase family. [Bacteroides
           xylanisolvens XB1A]
          Length = 341

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/343 (11%), Positives = 91/343 (26%), Gaps = 59/343 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++ L    +    +  Q+       +  +N+  L +        +           
Sbjct: 1   MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           +  +  +    + +    L  D       I+ + E+ +Y  +  +  +            
Sbjct: 61  NTMKYKAKLKNMSEILSMLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQ 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H +      +  A     K   +      +     + +    R  +     I G+K+ 
Sbjct: 118 YVHYEGADQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIAGEKMH 176

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  H  S           SP+     +Q + +KD +  K++S    VI GD N      
Sbjct: 177 FIVNHWPSR-------AATSPARERAGEQVRAIKDSL-LKEDSAAKIVIMGDMNDDPMDK 228

Query: 219 GNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271
                         + P D    +                    D  V   N        
Sbjct: 229 SMAVALGAKRKPADVGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 288

Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297
            + +   ++  D +  +  +                  SDH P
Sbjct: 289 LKFYKHEIFCRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 331


>gi|260891468|ref|ZP_05902731.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
 gi|260858851|gb|EEX73351.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
          Length = 246

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 83/285 (29%), Gaps = 52/285 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A++ +++++NI       G                 L +  K  + D V LQE+  +   
Sbjct: 10  AKEFKIMTYNIYGGRLTNG---------------QKLGESIKPYEPDFVSLQEVDKFTKR 54

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +      +              K    +     I+   K       +Y L          
Sbjct: 55  SNFRDITSDIAKVLGYDYYFFKKSRDYDGGEYGISFISKYPLEKIYTYELPSEG-----V 109

Query: 141 GNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             R+ +   +     GKK+ V++ HL                  +  ++ + L D +T+ 
Sbjct: 110 EKRQLIVAELSKKTFGKKVLVMNTHLDFKQ-------------QIKPEEMESL-DLLTKF 155

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            +      ++GDFN         +         D    + +   S      +      ID
Sbjct: 156 FDKDDIKFLSGDFNFLPTTKYYGEIT------KDWRDTYMESNASGVRTLSDP----RID 205

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y    Q+    +         Y  +D      +LSDH P     D
Sbjct: 206 YIFGSQSKKWKVKSS------YFINDATQDWTKLSDHLPYITVLD 244


>gi|121596014|ref|YP_987910.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42]
 gi|120608094|gb|ABM43834.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42]
          Length = 279

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 91/294 (30%), Gaps = 51/294 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P ++ VA   ++++ N++                        LR+  + + AD+VFLQE+
Sbjct: 29  PSSSPVA--FKVLTVNVHKGFTSFNRRFM----------LHELREAVRQVSADLVFLQEV 76

Query: 75  GSYNAVAKV----FPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
              +         FP+     F +        + +     D H   A+  K   V  +++
Sbjct: 77  LGTHQRHAGRVTNFPQEPHYEFLADSIWTQYAYGRNAVYTDGHHGNALLSKFPIVHYENH 136

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            +  +         R  +  +++       V  I +                 +   QQ 
Sbjct: 137 DISVSG-----PERRGMLHCVLQPPQHARPVHAICVHLGL-----------QEAHRQQQL 180

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + +   +        P ++AGDFN        +D   +    ++  ++            
Sbjct: 181 RRVSALVHSFPAQD-PVIVAGDFNDWRGRA--HDVLQREAGLHEVFVQACGRA---VRTF 234

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +P+D   +   +           +       +    RLSDH P++ + 
Sbjct: 235 PASLPLLPLDRIYVRGTS-----------VHTPMSLPRRPWNRLSDHAPLAAEI 277


>gi|212715599|ref|ZP_03323727.1| hypothetical protein BIFCAT_00498 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660966|gb|EEB21541.1| hypothetical protein BIFCAT_00498 [Bifidobacterium catenulatum DSM
           16992]
          Length = 286

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 79/311 (25%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81
            + + + N+N +                 +    + Q+A     D+  +QE+ +    + 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEQWAAKNTPDVWCMQEVRAPQNEID 46

Query: 82  KVFPKNTWCIFYS----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +    +     +  +N             + +      V ++       +D  
Sbjct: 47  PIFDEFGFEYATAGRVDDQSELNRMNEICRIKGRAGVGLLSTLPVVEKRYGLPGLEEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  I V  +++ +    D  +         L      ++    +
Sbjct: 107 S---GRWIEADVQTPQGYVITVTCVYVHAGNTDDPEKMKQK--YRFLDTMLARMEQLRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +   + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRDLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +           +  D   +   R 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAETACG-------FVIDKAPTYDLRW 274

Query: 293 SDHCPISIDYD 303
           SDH P+SI YD
Sbjct: 275 SDHAPLSIMYD 285


>gi|323344203|ref|ZP_08084429.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oralis ATCC 33269]
 gi|323094932|gb|EFZ37507.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oralis ATCC 33269]
          Length = 317

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/336 (10%), Positives = 93/336 (27%), Gaps = 59/336 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKR 49
           MI   +LA VF  V               N   L +    +  ++           +  R
Sbjct: 1   MILSLLLASVFTFVEL-------------NCENLFDCLHDTSKQDEEFMPDSYRHWTRTR 47

Query: 50  TTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
                  + Q   +           D+V L E+ + + +  +  ++        +    +
Sbjct: 48  YWRKLNHIGQEILSCGEDTSGWSLPDMVALCEVENDSVMHDLTMRS-----LLRKAGYRY 102

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVL 160
               S +     +A+          ++  +           R  +    V ++G  + V 
Sbjct: 103 IMTSSPDLRGIDVALMYSPFSFSLLNHHSIRVAPMKDMRPTRDILYASGVVLSGDTLHVF 162

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
            +H  S    ++    +    +     A      ++ + +     ++AGDFN   +    
Sbjct: 163 VVHAPSRAGGEAATRPFRMLVARRLGAAVDSIRRLSPRAK----VIVAGDFNDYSDSRSI 218

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-- 278
           +    + +       +            +       +D+ + D++    L++    +   
Sbjct: 219 DYVCKRGLINVSEGAKGSHGAKG---TYRYKGEWGSLDHILADEDLADSLVECRIHDAPF 275

Query: 279 ------------LYNEDDIKSRGKRLSDHCPISIDY 302
                        +         +  SDH P+   +
Sbjct: 276 LLTDDKTYGGKQPFRTYIGPKYQQGFSDHLPLVARF 311


>gi|297242738|ref|ZP_06926676.1| exonuclease III [Gardnerella vaginalis AMD]
 gi|296888949|gb|EFH27683.1| exonuclease III [Gardnerella vaginalis AMD]
          Length = 288

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 77/285 (27%), Gaps = 45/285 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN--- 108
           ++   +  ++     D+  +QE+ +               + ++E ++N  K D+     
Sbjct: 15  AERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSENIVNSIKNDNFTYTN 74

Query: 109 -----DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                     +A+      V ++      ++D  S    R     +   +G +I +  ++
Sbjct: 75  EVCRVKGRAGVALVTSLPVVEKRYGLPGLSEDVDS---GRWVETDVRTPDGYEITIASVY 131

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------ 217
           + +    D            L      L +            ++ GDFN           
Sbjct: 132 VHAGNVDD--PQKMKQKFRFLDTMLTRLGELRDAAASGGNQAILCGDFNIAHTSLDIKNA 189

Query: 218 ----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPID 258
                             + I+  + +                   +           +D
Sbjct: 190 KANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAFDNNVGWRLD 249

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y        +           +  D  +S   R SDH P+SI YD
Sbjct: 250 YQFATPEIAESARG-------FVIDRAESYDARWSDHAPLSIKYD 287


>gi|302889004|ref|XP_003043388.1| hypothetical protein NECHADRAFT_53421 [Nectria haematococca mpVI
           77-13-4]
 gi|256724304|gb|EEU37675.1| hypothetical protein NECHADRAFT_53421 [Nectria haematococca mpVI
           77-13-4]
          Length = 341

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 87/292 (29%), Gaps = 33/292 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A    ++++N+  L      +  ++     +     + Q+ +    D++ LQE   ++ V
Sbjct: 7   ASSFNILTYNVAGLPGIINSNGIEDKKLAASF----IGQHMREEAYDVIHLQEDFDFHDV 62

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +   +T+  F S             + ++T                      D F+  
Sbjct: 63  IAINDNHTYLTFSS-------GDVIDGDGLNTFSWYNSSLFDRYTWKECATNGGDCFT-- 113

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +    +   I+G ++ + ++H  +                        +   I +   
Sbjct: 114 -PKGFTYMTSHIDGLEVDLYNLHADAGNEWTDRWARSEG--------INQVLRHIKKH-N 163

Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTIDPND------SLIRFPKEKDSRCNANKNLR 252
              P ++AGDFN    +     N                   I     K + C+      
Sbjct: 164 KGRPVILAGDFNDVWTHPKRTINRLTDAGFTDAWVKLHHNGTIPENNGKSNGCDHPPQNN 223

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +   +D        +  L    F     ++  +      LSDH P+ +D+ +
Sbjct: 224 SCEVVDKVFYRSGTFVTLDAVKFD--YKSDIFVAGNNSPLSDHEPVLVDFVW 273


>gi|255015090|ref|ZP_05287216.1| hypothetical protein B2_14377 [Bacteroides sp. 2_1_7]
          Length = 619

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 85/310 (27%), Gaps = 66/310 (21%)

Query: 1   MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M + ++ A+V    +P   ++AQ         +R++S+NI      + V+          
Sbjct: 1   MRKWFIWAIVMIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 50

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D   +      +  D+V +QE+ S    +            +      ++     +   
Sbjct: 51  -DLGRIADAICKVAPDVVAVQEVDSVTVRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 108

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K   V  +   L G      R   R  + +  E    +      HL       
Sbjct: 109 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 155

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                   S  +L ++A +          +  P  IAGD+N   +           I   
Sbjct: 156 ---EDRMLSLPILRREAAF----------AHKPLFIAGDWNATAHSP--------FITEI 194

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               +                    +DY        +   + S                 
Sbjct: 195 SKDFQLLSNPKQATFPASTPD--SCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 243

Query: 292 LSDHCPISID 301
            SDH P+  +
Sbjct: 244 ASDHRPVVTE 253


>gi|269796800|ref|YP_003316255.1| exodeoxyribonuclease III [Sanguibacter keddieii DSM 10542]
 gi|269098985|gb|ACZ23421.1| Exodeoxyribonuclease III [Sanguibacter keddieii DSM 10542]
          Length = 263

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 68/305 (22%), Gaps = 70/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WNIN                   +       + +    D++ LQE  + ++    
Sbjct: 1   MRLATWNIN----------------SIRARVDRAVAFLERSGTDVLALQETKAKDS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       +            +A+  +           LG  D        
Sbjct: 41  ------QFPFEAFEAAGYEVAHFGLSQWNGVAIISRVGLEDVS----LGFPDQPQFGEEP 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201
                 +      + V  +++     LD+    Y             L+         + 
Sbjct: 91  VVEARAIGATCGGVRVWSLYVPHGRALDNPHYAYKLD------WLSTLRGHAQSWVEADP 144

Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                + GD+N                         D +   +         +       
Sbjct: 145 QAKVALVGDWNVAPRDTDVWDMAVFEGQTHVSQPERDAFAAFEGAGYTEVSREFVPEDRK 204

Query: 247 ANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID+          +            D  + +GK  SDH P
Sbjct: 205 -YTYWDYQQLRFPKNQGLRIDFAYTSPALTSAVTGVEI-------DRDERKGKGASDHVP 256

Query: 298 ISIDY 302
           + +D 
Sbjct: 257 VIVDI 261


>gi|229828382|ref|ZP_04454451.1| hypothetical protein GCWU000342_00443 [Shuttleworthia satelles DSM
           14600]
 gi|229792976|gb|EEP29090.1| hypothetical protein GCWU000342_00443 [Shuttleworthia satelles DSM
           14600]
          Length = 390

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 95/317 (29%), Gaps = 56/317 (17%)

Query: 20  VAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
               + ++SWN+               G  +   S  R   +   +    K ++ D    
Sbjct: 88  AGDLLSVLSWNVGYGALGDNADFFMDGGKGVKTASQDRVKENLNEIVTEVKKINPDFALF 147

Query: 72  QEMGSY----------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           QE+               + +  P+      Y+ +             +++ +    +  
Sbjct: 148 QEVDVNSHRSYGIDESQILGQAMPRGQMTFAYNFKVAFIPYPLPPIGKVNSGLVTLSRYQ 207

Query: 122 RVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYS 178
                   L       +R GN  R      + + NGK++ ++++HL+++           
Sbjct: 208 IRDASRTSLPNPFSWPNRLGNLKRCLAVHRIPVSNGKELVLVNLHLEAY----------- 256

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------KINYLGNNDDFWKTI 228
                   Q + L++ + ++ E+    +  GDFN+           ++          + 
Sbjct: 257 DDGEGKLAQTKVLRELLEKETEAGNYVIAGGDFNQIFSNVDSSAFPLHEGKWEPGIINSA 316

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---LIQESFSEILYNEDD- 284
           D  + +        + C +         +D+ +   +   F   +I           +  
Sbjct: 317 DFGEGMQLLMDSGTASCRS---------LDHPLAGADQKDFQFYIIDGFICSENVTVEST 367

Query: 285 -IKSRGKRLSDHCPISI 300
             +      SDH P+ +
Sbjct: 368 QTQDLNFHASDHNPVVL 384


>gi|148554721|ref|YP_001262303.1| endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1]
 gi|148499911|gb|ABQ68165.1| Endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1]
          Length = 363

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 87/298 (29%), Gaps = 33/298 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++++NI  L     +   + +  +  +    LR         IV LQE  +  A    
Sbjct: 51  LSVMTYNIEGLPWPVRLGR-EAAFTKIGARLEALR--LLGEQPHIVVLQEAFTDQAKRIG 107

Query: 84  FPKNTWCIFYSTERLINH------------------SKRDSNNDIHTAIAVRKKNVRVLQ 125
                  I    +R +                    S   S   + + + +      +  
Sbjct: 108 VEGGYRYIVNGPDRSLAGAAITTEADRAFQRDASFFSGERSGKVVDSGLQILSDYPILSV 167

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           +          F    N+ AV  ++ + G  + I V+D+HL S     +       S   
Sbjct: 168 RRMAFPTCA-GFDCLANKGAVLAMIAVPGLGEPIAVVDVHLNSRR---ASHVADDRSLYA 223

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             +Q   L  ++    +   P ++AGDFN                   +      ++   
Sbjct: 224 YRRQIDALDQFLAANVKPGTPVIVAGDFNVGQRPARQAYFTAHLRKWGERAPGAVRDALH 283

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS------RGKRLSDH 295
            C A   +   +P D       A  + +           D +          + LSDH
Sbjct: 284 SCLAAPAICGAMPSDAAFSLARARDWELAVPGERAELAVDGLSVPFGHEIDERMLSDH 341


>gi|261416712|ref|YP_003250395.1| exodeoxyribonuclease III Xth [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373168|gb|ACX75913.1| exodeoxyribonuclease III Xth [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325662|gb|ADL24863.1| exodeoxyribonuclease III [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 265

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 79/305 (25%), Gaps = 76/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82
           +++ SWN+N +                         +    D DI+ LQE+ +  N V++
Sbjct: 1   MKIYSWNVNGIRSVLKKGFE---------------DWFSATDPDILCLQEVRAEKNQVSE 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  +  +  +++  +             ++ +AV  K           +   D   R   
Sbjct: 46  IATREGYYTYWNACKRK---------KGYSGVAVYSKIEPDAVNYGFDIEEFDEEGRVLQ 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                         +   D  L    F +  +        L         +   Q     
Sbjct: 97  --------------LVFPDWVLNCIYFPNGGQGDDRLDYKLRFY--DAFLENSKQWLADG 140

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              V  GD+N                    L     +      N  +  F        +A
Sbjct: 141 KHVVTVGDYNTCHKEIDIARPKENENVSGFLPIERAWMDKYVENGFVDTFRTLHPDTRDA 200

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           +DY  +D      ++                     SDHCPI
Sbjct: 201 YSWWSNRFGARERNVGWRLDYGFVDAALMPNVVSSEIL-----------SNVMGSDHCPI 249

Query: 299 SIDYD 303
           S++ +
Sbjct: 250 SLELE 254


>gi|225026087|ref|ZP_03715279.1| hypothetical protein EUBHAL_00328 [Eubacterium hallii DSM 3353]
 gi|224956574|gb|EEG37783.1| hypothetical protein EUBHAL_00328 [Eubacterium hallii DSM 3353]
          Length = 250

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 78/299 (26%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         + K  DADI  +QE          
Sbjct: 1   MKLISWNVNGLRACVKKGFE---------------DFFKEADADIFCVQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  +++      +S                K+   +       G          R
Sbjct: 45  FAPEGYECYWNYAEKKGYSGTAVFTK---------KHPLKVWN-----GIGMEEHDQEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  + + ++  +        +          +  Q L        +   
Sbjct: 91  -----VITLEFEDFFFVTVYTPNSQSELKRLDYRMKWEDDFREYLQEL--------DKEK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                   + +  +     +  F         A 
Sbjct: 138 PVIMTGDLNVAHEEIDLKNPKTNKKNAGFTQEERNKFTELLGAGFVDSFRYLNPELAGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +           IDYFV+ +   + +           ED I  +    SDHCPI
Sbjct: 198 TWWSYRFKAREKDAGWRIDYFVVSERWKEKI-----------EDAIIYKTVMGSDHCPI 245


>gi|254447686|ref|ZP_05061152.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015]
 gi|198263029|gb|EDY87308.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015]
          Length = 256

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 78/272 (28%), Gaps = 63/272 (23%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++ +  +AD+V +QE    ++    +VF    +  +        +S             +
Sbjct: 22  EWMQAQNADVVCIQETKAQAHQLDDEVFHPAGYHRYLFDAEKKGYSGVALYAKQKPDDVI 81

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                          G  +       R      +E     + V  I++ S    D  +  
Sbjct: 82  --------------YGFGEEGFDREGRY-----IEARFGDLSVASIYVHSGSSGDERQQE 122

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------- 223
                     + +        + E    +++ GD+N         +              
Sbjct: 123 KYRFMDFYLPKLKA-------QGEDGRRYILCGDWNIAHTKADIKNWRGNQKNSGFLPEE 175

Query: 224 --FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
             +  T+  +   +   +E +   ++     N+           IDY ++  N    +  
Sbjct: 176 RAWLDTLFDDMQWVDAFREIEQEEHSYTWWSNRGQAWANNTGWRIDYHIVSPNLKGTVKS 235

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            +R SDH P++IDYDF
Sbjct: 236 TDI-----------YTQERFSDHAPLTIDYDF 256


>gi|15678240|ref|NP_275355.1| exodeoxyribonuclease [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|2621258|gb|AAB84718.1| exodeoxyribonuclease [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 257

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 85/307 (27%), Gaps = 81/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++++SWN+N L                        ++      DI+ LQE+ +       
Sbjct: 4   LKIISWNVNGLRAVHRKGF---------------LKWFMEEKPDILCLQEIKAAPEQLPR 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+     +  F++      +          + +A+  K      +    +   D+  R  
Sbjct: 49  KLRHVEGYRSFFTPAERKGY----------SGVAMYTKVPPSSLREGFGVERFDTEGRIQ 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                      +     + +I+  +    +              +      + + ++++S
Sbjct: 99  I---------ADFDDFLLYNIYFPNGKMSEER-------LKYKLEFYDAFLEDVNRERDS 142

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
               +I GDFN     +                       K I+     +   +  +S  
Sbjct: 143 GRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENG--YVDTFRMFNSDP 200

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           +DYF +++     + +                    SDHC
Sbjct: 201 GQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL-----------SDVMGSDHC 249

Query: 297 PISIDYD 303
           PI ++ +
Sbjct: 250 PIGLEIE 256


>gi|332971495|gb|EGK10445.1| exodeoxyribonuclease III [Kingella kingae ATCC 23330]
          Length = 257

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +                        +Y     ADIV +QE+ +  A    
Sbjct: 1   MRIISANVNGIRSAYKKGF---------------LEYIAQSGADIVCVQELKAQEA-DLS 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +                 ++ +A+  K      Q    +   D+  R    
Sbjct: 45  VEMQQPHGMHGVWHCAQ-------KRGYSGVAIYSKRAPDRVQYGLGIELFDNEGRF--- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +                L            
Sbjct: 95  ------VRADFGRLSVISLYLPSGTSAEERQAYKYQFLDAFYPILADLLA-------EGR 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        ++        
Sbjct: 142 DVVVCGDWNIAHQNIDIKNWKGNLKNSGFLPEEREWIGNVIAKLGWTDMWRKLYPDVAGY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++                         + ++ SDH P+ 
Sbjct: 202 TWWSNRGQAYAKDVGWRIDYQMVSPELAAKAQSAHV-----------YKDEKFSDHAPLV 250

Query: 300 IDYDF 304
           +DYD+
Sbjct: 251 VDYDY 255


>gi|311276364|ref|XP_003135157.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Sus
           scrofa]
          Length = 515

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 90/330 (27%), Gaps = 69/330 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +      + ++     T      + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRSHLQGAGYEEPSNCTAR---AVGRILDKLDADIVCLQETKVTRDVLTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +     +A  V         +  L       G  D 
Sbjct: 59  PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATLNGDVNCYGNMDE 118

Query: 137 FSRAGNRR------AVELLVEI-----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           F++   R       A+    +I     + K + V++++                +  +  
Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTQDGDEKSLTVINVYCPHADPGKPE----RLTFKMRF 174

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTID-- 229
                ++        +    +I GD N                             +   
Sbjct: 175 YHLLQIRA--EALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDGLLSNL 232

Query: 230 ------------PNDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQE 273
                        +    +  ++    C +             IDY + D+       Q 
Sbjct: 233 RCQAGSHMGPFIDSYRYFQPKQKGAFTCWSTVTGARHLNYGSRIDYVLGDRALVMDTFQS 292

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           SF                 SDHCP+    +
Sbjct: 293 SFVL----------PEVMGSDHCPVGAVLN 312


>gi|288560813|ref|YP_003424299.1| exodeoxyribonuclease III Xth2 [Methanobrevibacter ruminantium M1]
 gi|288543523|gb|ADC47407.1| exodeoxyribonuclease III Xth2 [Methanobrevibacter ruminantium M1]
          Length = 258

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 78/307 (25%), Gaps = 78/307 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80
           K+RL+SWN+N +                         +     ADIV LQE  +      
Sbjct: 3   KIRLISWNVNGIRAIHKKGF---------------LDWFNEEKADIVNLQETKAKIEQLP 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+     +  ++ +     +S   +   I     +               G        
Sbjct: 48  KKLINVPGYTSYFHSAERGGYSGVATYTSIEPNEVIN--------------GMGIEKFDI 93

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R      + ++     +L+I+  +    +                     D+    ++
Sbjct: 94  EGRL-----IRLDFDDFTLLNIYYPNGGRDEER-------LQYKLDFYDAFLDYANDLRD 141

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRC 245
                VI GD N     +                           N  +  F    ++  
Sbjct: 142 QGKNLVICGDLNTAHKEIDLARPKQNEDVSGFLPIEREWVSKFLDNGYVDTFRMLHENEK 201

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           +DYF +++     +        +             SDHC
Sbjct: 202 EKYTWWSYRTRARERNVGWRLDYFFVNEEFKDNVRASYIISEV-----------MGSDHC 250

Query: 297 PISIDYD 303
           PI+++ +
Sbjct: 251 PIALEIE 257


>gi|85858539|ref|YP_460741.1| exodeoxyribonuclease III [Syntrophus aciditrophicus SB]
 gi|85721630|gb|ABC76573.1| exodeoxyribonuclease III [Syntrophus aciditrophicus SB]
          Length = 267

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 72/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++ ++N+N                   S   ++  + +    D+  +QE    +A    
Sbjct: 9   FKIATYNVN----------------SIRSRLHIILSWLEENRPDVFCMQETKVADA---- 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +  +         +  +A+     +    +Y L G  D        
Sbjct: 49  ------RFPADAFTVAGYHVVFRGMKQYNGVAIAS-LEKPENVTYGLGGEADDADEDRLI 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV          + V++ ++          N  +P  +   Q     ++++ QK  S  
Sbjct: 102 AAVY-------SGVPVINTYVP------QGRNRENPQFAYKLQWYARFREYLVQKWSSDA 148

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N     +  +D               D +  +        F K         
Sbjct: 149 PLVWCGDLNVAPEQIDVHDPKRLLGHVCFNPEVWDAFDRVKSWGLEDLFRKHHPGEVECY 208

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            ID+ +            +        D      ++ SDH  +
Sbjct: 209 TFFDYRVPRSVERKLGWRIDHILSTPALAAHCDSCNI-------DMNPRMAEKPSDHTIL 261

Query: 299 SIDYD 303
             ++ 
Sbjct: 262 VAEFT 266


>gi|15807284|ref|NP_296014.1| hypothetical protein DR_2293 [Deinococcus radiodurans R1]
 gi|6460101|gb|AAF11839.1|AE002061_6 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 322

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 82/287 (28%), Gaps = 58/287 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                ++R++++N+                + +      L    +  DAD++ LQE    
Sbjct: 92  PQADGELRVLTYNV---------------ARGSQGTAAALLSTLQASDADLILLQETNLL 136

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +    +  ++    +  T+                 +    +   + Q  + + G+  +F
Sbjct: 137 DPAKGLALRSGLSGYALTQGRE--------------VWTLSRWPVLRQTQHAVPGSTRTF 182

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           +    +         +G+ + V++ HL +     +L    +        + + +      
Sbjct: 183 AETWVKGP-------DGRTLRVVNAHLGTVLITSALRGDTAKVRRTAQARREQVALLCRI 235

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P ++ GD N            ++ +          +               + I
Sbjct: 236 AAHEPGPVLLGGDLNTPP-----RGRLYRRLTGCFGPDAHDRAGQGPGWTF--PGLLLRI 288

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           D+ ++           S                  SDH P+ ++Y +
Sbjct: 289 DHLLVRDLRPTRARVLSM---------------AGSDHRPLLVEYRW 320


>gi|50546895|ref|XP_500917.1| YALI0B15147p [Yarrowia lipolytica]
 gi|74635405|sp|Q6CEJ6|CCR4_YARLI RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|49646782|emb|CAG83167.1| YALI0B15147p [Yarrowia lipolytica]
          Length = 705

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/337 (12%), Positives = 83/337 (24%), Gaps = 56/337 (16%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++S+N   +  +  +                  L +     D+DI+  QE+   +   
Sbjct: 341 FTVMSYNTLCDKYTTVQMHGYTPLWALGWKHRSETLLKEVIGYDSDILCFQEVDGASFED 400

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDI-----HTAIAVRKKNVRVLQQ---------- 126
              PK     +         ++  S           AI  + K+  ++++          
Sbjct: 401 FWSPKLHQLGYAGLYHPKTRARTMSKEKDAKRVDGCAIFYKTKSFCLIEKLSLDFSSLAL 460

Query: 127 ---SYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDS--------- 172
               +       +     +  A+  L+E    G+KI V + HL      +          
Sbjct: 461 KNNDFKKTADTYNRVLNKDNIALIALLEHVTTGQKIIVTNTHLHWDPAFNDVKLIQVALL 520

Query: 173 -----LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------- 217
                         S          + +  +    +P VI GDFN   +           
Sbjct: 521 LDEVEKFAERVAKDSNRVSARNQDGNNVKYESGKKLPLVICGDFNSTTDSGVYSLFSQGT 580

Query: 218 ---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AY 267
                            + ++   +L             N        IDY     N   
Sbjct: 581 VTNHKDMSGRAYGKFTDEGMNHGFTLKSAYSNIGELAFTNYTPNFVDVIDYVWYSSNALS 640

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +         +           SDH  +  ++ F
Sbjct: 641 VRGLLGGIDPDYTSNMVGFPSVHYPSDHISLLAEFSF 677


>gi|326772453|ref|ZP_08231737.1| exodeoxyribonuclease III [Actinomyces viscosus C505]
 gi|326637085|gb|EGE37987.1| exodeoxyribonuclease III [Actinomyces viscosus C505]
          Length = 269

 Score = 78.4 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 82/309 (26%), Gaps = 69/309 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  + +  D D + +QE+         
Sbjct: 1   MRLATWNVN----------------SIRTRVDRVLAFLEREDIDALAMQEIKCRPD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +A+  +   +   +    G     ++    
Sbjct: 41  ------QFPVEPFEAAGYELAIHGLNQWNGVAIASRVG-LDDVAVSFPGQPAWAAKPEAE 93

Query: 144 RAVELLVE-------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             VE            +   + +  +++ +   L     TY           + L+D + 
Sbjct: 94  PVVEARALGATVGAASDAAPVRLWSLYVPNGRELTHPHYTYKLD------WLRVLRDDVA 147

Query: 197 QK--KESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFP 238
                +  +P  + GD+N                         + F    +     +   
Sbjct: 148 AWLEADPDLPLALVGDWNVAPRDEDVWDMSAFEGATHVSEPEREAFAAFAEVGMREVTRE 207

Query: 239 KEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +  +      + LR      + ID+          +   +        D  + +GK  SD
Sbjct: 208 RVTNYTYWDYQKLRFPRNEGMRIDFVYASPALAGRVTDAAI-------DRDERKGKGASD 260

Query: 295 HCPISIDYD 303
           H P+ ++  
Sbjct: 261 HVPVIVEVS 269


>gi|284054173|ref|ZP_06384383.1| Endonuclease/exonuclease/phosphatase [Arthrospira platensis str.
           Paraca]
          Length = 498

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 90/304 (29%), Gaps = 31/304 (10%)

Query: 22  QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             V++ ++N+  L           + + +      T + +  + + ADI+  QE+    A
Sbjct: 171 NSVKIGTFNLYNLVLPNLTYYETRQYTPELYQQKKTWVSRQLETMQADIIGFQEIFHPEA 230

Query: 80  VAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           + ++      +   +         K          I   +   +   +S   +       
Sbjct: 231 LQEILAATPFYDHAHLITTNPRGDKPVVGLCSKLPIISWQIYDKFPPESQIDIEGTIIPI 290

Query: 139 RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS----------PSCSLLSQQ 187
              +R  + + +++  + +  V  +HLKS     +                 S    + +
Sbjct: 291 NHFSRPVLAVNIQLKDRLQCTVFVVHLKSQRPQITEGVDSQDPVEKAKGKVRSLLRRAAE 350

Query: 188 AQWLKD-WITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPNDSLIRF 237
           A  L+   +     S  P ++ GDFN              +      +K     D L  +
Sbjct: 351 ATALRYIMLKTWSHSQNPIILLGDFNDSDLAITTKIMAGDISWKKTRFKPNHNQDELRLY 410

Query: 238 PKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             +      + ++             +D+ ++ Q       ++          +     +
Sbjct: 411 SVKDIQARQSYRDCYYTYMYNGYYETLDHILVSQELVVENSRQVGRVSYVALFNDHLVDQ 470

Query: 291 RLSD 294
            LSD
Sbjct: 471 SLSD 474


>gi|197335619|ref|YP_002156266.1| nuclease [Vibrio fischeri MJ11]
 gi|197317109|gb|ACH66556.1| nuclease [Vibrio fischeri MJ11]
          Length = 884

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/383 (10%), Positives = 95/383 (24%), Gaps = 104/383 (27%)

Query: 23  KVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVFLQE 73
            + + S+N+           +     +N    +  D+      +      +DADI+ L E
Sbjct: 479 DLTITSFNVLNYFTSVAAGGDANPTGQNRGATSADDFAIQQAKILSALVAIDADIIGLME 538

Query: 74  MGSYNAVAKVF--------------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           + +                       ++ +       +     +   ++ I  A+  R  
Sbjct: 539 VENNGFGENSAINDLTTALNAQFEDEEDHYKYIEIKNKDKYQGEYLGSDAIMVALLYRPS 598

Query: 120 NVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWV 159
            V++                  + +        +       R ++     +    + + V
Sbjct: 599 EVKLKGKARVIKTPEQHIAENTITRDNNGTIEFNPAYDKYQRHSLVQKFMVKDAKEPLTV 658

Query: 160 LDIHLKSFCF-----------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
           +  HLKS                   +            A+ + D +   K      +I 
Sbjct: 659 VVNHLKSKGSECIEQWQNFEEDKDPSDLQGNCNRFRVSAAKAIGDELESVKGD---VLIL 715

Query: 209 GDFNR-----------KINYLGNNDDFW-----------------------KTIDPNDSL 234
           GD N              +    N D +                       +       +
Sbjct: 716 GDMNAYGMEDPLLTLTDYSQEKYNRDIFTASYTTLGTDKDGKPLPYETTGSQISQGYGYI 775

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
                   +   +         +D+ + +++  K + +     I   E ++     +   
Sbjct: 776 NLNTLRHGTDTFSYTYSGELGNLDHALANKSLAKRVAEIEDWHINAAESNLFEYSPKYTG 835

Query: 292 ----------LSDHCPISIDYDF 304
                      SDH PI I  D+
Sbjct: 836 DMVKYNDMYSASDHDPIVITLDY 858


>gi|15604130|ref|NP_220645.1| exodeoxyribonuclease III (xthA1) [Rickettsia prowazekii str. Madrid
           E]
 gi|3860822|emb|CAA14722.1| EXODEOXYRIBONUCLEASE III (xthA1) [Rickettsia prowazekii]
 gi|292571858|gb|ADE29773.1| Exodeoxyribonuclease III [Rickettsia prowazekii Rp22]
          Length = 261

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 79/307 (25%), Gaps = 72/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+ A     DI+ LQE    N++   
Sbjct: 1   MKVVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVANSL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       S    +  +A+  K       +  L            R
Sbjct: 42  ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFALELYNGDK-------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ ++     +V           D  +   +       +  + +++W T  +    
Sbjct: 89  HIAAIVNDLEIHNFYV-------PAGGDIPDVEVNFKFKHKLEYVRLMREWFTANRTKND 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N   +                         +  +    +             
Sbjct: 142 KIIIVGDLNIAPHEHDVWSSKQMQNVISHTDIERSLLIELQNSLGFIDSSRYFISLNKKC 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L          +         R SDH P
Sbjct: 202 YTWWSYRNVDWKKSNRGRRLDHIWVSDNLKYAL-------FSMHLLSEARDWFRPSDHVP 254

Query: 298 ISIDYDF 304
             + ++F
Sbjct: 255 YLVTFNF 261


>gi|226365708|ref|YP_002783491.1| exodeoxyribonuclease [Rhodococcus opacus B4]
 gi|226244198|dbj|BAH54546.1| exodeoxyribonuclease [Rhodococcus opacus B4]
          Length = 268

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/279 (12%), Positives = 77/279 (27%), Gaps = 55/279 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           +    L ++ +  +AD+V LQE           + P        ++           ++ 
Sbjct: 16  AARKGLTEWMERTEADVVCLQETRASDEQLAETLAPALEGGWNLASAE--------PSSK 67

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +A+  +      +    +G  D    A  R      +E +   + V  ++L S   
Sbjct: 68  GRNGVAILSRKPADAVR----VGHGDEEFAAAGRY-----IEADFDDLTVASLYLPSG-- 116

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------- 219
            ++           +   A++L         +    V+ GD+N     L           
Sbjct: 117 -EAQTPRQEEKERFMDSFARYLTVTAEAAVAAGRHVVVCGDWNIAHTELDLKNWKTNKKN 175

Query: 220 ------NNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNK---------IPIDYFVMD 263
                   +                +  +            +           IDY +  
Sbjct: 176 SGFLPHEREWMSALFAEGAHWADVVRLLEPDVAGPYSWWSYRGKAFDNDSGWRIDYQIAT 235

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   +   Q          +  ++  +R SDH P+++ Y
Sbjct: 236 RELAERAKQA-------VVERAETYDQRWSDHAPVTVQY 267


>gi|121635738|ref|YP_975983.1| putative nuclease [Neisseria meningitidis FAM18]
 gi|120867444|emb|CAM11216.1| putative nuclease [Neisseria meningitidis FAM18]
 gi|254671914|emb|CBA04230.1| putative endonuclease [Neisseria meningitidis alpha275]
 gi|308390182|gb|ADO32502.1| exodeoxyribonuclease [Neisseria meningitidis alpha710]
 gi|325131323|gb|EGC54034.1| exodeoxyribonuclease III [Neisseria meningitidis M6190]
 gi|325133258|gb|EGC55924.1| exodeoxyribonuclease III [Neisseria meningitidis M13399]
 gi|325137352|gb|EGC59940.1| exodeoxyribonuclease III [Neisseria meningitidis ES14902]
 gi|325141356|gb|EGC63839.1| exodeoxyribonuclease III [Neisseria meningitidis 961-5945]
 gi|325143494|gb|EGC65815.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240013]
 gi|325199171|gb|ADY94627.1| exodeoxyribonuclease III [Neisseria meningitidis G2136]
 gi|325206984|gb|ADZ02437.1| exodeoxyribonuclease III [Neisseria meningitidis M04-240196]
          Length = 259

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIAASGADIVCVQELKAQEADLSA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 47  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFDRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 MEYDY 256


>gi|116628238|ref|YP_820857.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMD-9]
 gi|116101515|gb|ABJ66661.1| Exonuclease III [Streptococcus thermophilus LMD-9]
 gi|312278865|gb|ADQ63522.1| Exonuclease III [Streptococcus thermophilus ND03]
          Length = 275

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGDSTRAQLSR------AVIDTLVTENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++    +   S  +     +       K       +YP +GA  +    G  
Sbjct: 55  KHLQILEDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        ++  
Sbjct: 114 -----IITLEFDTFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +     +  +         A 
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNLLNKGFIDTYRHLNGDVTGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +I+ +  +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVIKSNMIDSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|296225529|ref|XP_002758534.1| PREDICTED: deoxyribonuclease gamma-like isoform 1 [Callithrix
           jacchus]
          Length = 305

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 91/290 (31%), Gaps = 32/290 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
            A  +++ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N 
Sbjct: 17  SALALKICSFNVRSFGE---------SKQEDQNAMDVIVKVIKRC--DIILVMEIKDSNN 65

Query: 79  ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + +    N+         + +   R++  + + A   ++K V V ++SY     +
Sbjct: 66  RICPMLMEKLNGNSRRGMRYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYQYHDYQ 123

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D  +   +R    +  +     +    I         S+         L          W
Sbjct: 124 DGDADVFSREPFVVWFQSPYTVVKDFVIVPLHTTPETSV----KEIDELFDVYMDMKHRW 179

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                     F+  GDFN   +Y+         +  +   +    +++            
Sbjct: 180 ------KAENFIFMGDFNAGCSYVPKKAWKNIRLRIDPRFVWLIGDQEDTTVKKSTNCAY 233

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             I   +  Q     ++ +S S   + +    S  K L  SDH P+    
Sbjct: 234 DRI--VLRGQEIVSSIVPKSTSVFDFQKAYKLSEEKALDVSDHFPVEFKL 281


>gi|222112176|ref|YP_002554440.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY]
 gi|221731620|gb|ACM34440.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY]
          Length = 279

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 91/294 (30%), Gaps = 51/294 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P ++ VA   ++++ N++                        LR+  + + AD+VFLQE+
Sbjct: 29  PSSSPVA--FKVLTVNVHKGFTSFNRRFM----------LHELREAVRQVSADLVFLQEV 76

Query: 75  GSYNAVAKV----FPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
              +         FP+     F +        + +     D H   A+  K   V  +++
Sbjct: 77  LGTHQRHAGRVTNFPQEPHYEFLADSIWTQYAYGRNAVYTDGHHGNALLSKFPIVHYENH 136

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            +  +         R  +  +++       V  I +                 +   QQ 
Sbjct: 137 DISVSG-----PERRGMLHCVLQPPQHARPVHAICVHLGL-----------QEAHRQQQL 180

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + +   +        P ++AGDFN        +D   +    ++  ++            
Sbjct: 181 RRVSALVHSFPTQD-PVIVAGDFNDWRGRA--HDVLQREAGLHEVFVQACGRA---VRTF 234

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +P+D   +   +           +       +    RLSDH P++ + 
Sbjct: 235 PASLPLLPLDRIYVRGTS-----------VHTPMSLPRRPWNRLSDHAPLAAEI 277


>gi|160947302|ref|ZP_02094469.1| hypothetical protein PEPMIC_01235 [Parvimonas micra ATCC 33270]
 gi|158446436|gb|EDP23431.1| hypothetical protein PEPMIC_01235 [Parvimonas micra ATCC 33270]
          Length = 250

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWN+N L                         Y   ++AD   LQE+        +
Sbjct: 1   MRFISWNVNGLRACIKKGF---------------LDYFNEINADFFCLQEIKMSEGQLDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +     +   +R             ++  A+  K   +  +    +   D+  R    
Sbjct: 46  ELEGYETFYNYAQR-----------KGYSGTAIFTKFKPLSVKYGMGMEEHDNEGRL--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +++  +  +                         ++++        
Sbjct: 92  ------ITLEYDDFFLVTCYTPN-------SKQELLRLDYRMVWEDAFRNYL-LDLNKTK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                         +    +  +     F      + N  
Sbjct: 138 SVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKMSILLDSGFTDTFRYFYPDKENEY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  ++    L+     + +             SDHCP+ 
Sbjct: 198 SWWSYFGKSRERNTGWRIDYFLTSKDMDDRLVDAQIHQSIL-----------GSDHCPVY 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEI 249


>gi|308805699|ref|XP_003080161.1| unnamed protein product [Ostreococcus tauri]
 gi|116058621|emb|CAL54328.1| unnamed protein product [Ostreococcus tauri]
          Length = 356

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 86/309 (27%), Gaps = 43/309 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R++SWN+  L+          +     +   +          D+V LQE+    +  
Sbjct: 47  GTLRVMSWNLQLLAGPFSGQGGFRADLIKRARKIVQNIIVVAETVDVVCLQEVWDDASRT 106

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +                       +      + V  K   V              +RA 
Sbjct: 107 VLRSGL-----------ATTFPYIFSPAAKCGLMVCSKASHVCNHFVKFTHRGGIEARAF 155

Query: 142 NRRA--VELLVEINGKKIWV---LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            +      L +  N   + V   L+ HL+S  +       +S    +     + +++   
Sbjct: 156 EKGVSTTYLRLAQNDACVRVAIILNTHLQSDYWCSGRVARFSQLVCVRESFMRAVRE-CR 214

Query: 197 QKKESLVPFVIAGDFNRKINYLGNN-----------DDFWKTIDPNDSLIRFPKEKDSRC 245
                +   ++AGD N +                  D     ++ +DS          R 
Sbjct: 215 GNGYVVERVLLAGDINVEHGSAEYEHMMHSIFPGAIDLMNSPLNDDDSFRLTFPVARWRH 274

Query: 246 NA--------NKNLRNKIPIDYFV------MDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                       +L  ++ IDY +      + Q             +        +RG+ 
Sbjct: 275 YILKCGRESRYFDLEPRVRIDYVMDLTPMGVSQGVPPRHKHVDSGYVNRA-LCRDARGRA 333

Query: 292 LSDHCPISI 300
           LSDH PI  
Sbjct: 334 LSDHFPIVA 342


>gi|317179707|dbj|BAJ57495.1| exodeoxyribonuclease [Helicobacter pylori F30]
          Length = 250

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKVLEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|262381285|ref|ZP_06074423.1| metallophosphoesterase [Bacteroides sp. 2_1_33B]
 gi|262296462|gb|EEY84392.1| metallophosphoesterase [Bacteroides sp. 2_1_33B]
          Length = 628

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 85/310 (27%), Gaps = 66/310 (21%)

Query: 1   MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M + ++ A+V    +P   ++AQ         +R++S+NI      + V+          
Sbjct: 10  MRKWFIWAIVMIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 59

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D   +      +  D+V +QE+ S    +            +      ++     +   
Sbjct: 60  -DLGRIADAICKVAPDVVAVQEVDSVTGRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 117

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K   V  +   L G      R   R  + +  E    +      HL       
Sbjct: 118 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 164

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                   S  +L ++A +          +  P  IAGD+N   +           I   
Sbjct: 165 ---EDRMLSLPILRREAAF----------AHKPLFIAGDWNATAHSP--------FITEI 203

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               +                    +DY        +   + S                 
Sbjct: 204 SKDFQLLSNPKQATFPASTPD--SCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 252

Query: 292 LSDHCPISID 301
            SDH P+  +
Sbjct: 253 ASDHRPVVTE 262


>gi|256840681|ref|ZP_05546189.1| metallophosphoesterase [Parabacteroides sp. D13]
 gi|256737953|gb|EEU51279.1| metallophosphoesterase [Parabacteroides sp. D13]
          Length = 628

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 85/310 (27%), Gaps = 66/310 (21%)

Query: 1   MIRKYVLALVFF-LVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M + ++ A+V    +P   ++AQ         +R++S+NI      + V+          
Sbjct: 10  MRKWFIWAIVMIGCLPINKALAQQSGDAERNTLRIMSYNIRNGRGMDEVT---------- 59

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D   +      +  D+V +QE+ S    +            +      ++     +   
Sbjct: 60  -DLGRIADAICKVAPDVVAVQEVDSVTVRSGGIDVLRTLGERTLM-FPTYAPAIDFDGGK 117

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K   V  +   L G      R   R  + +  E    +      HL       
Sbjct: 118 YGVGMLSKEKPVSYRYIALPG------REEERVLLWVEFE----RYIFCCTHLSLTP--- 164

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                   S  +L ++A +          +  P  IAGD+N   +           I   
Sbjct: 165 ---EDRMLSLPILRREAAF----------AHKPLFIAGDWNATAHSP--------FITEI 203

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               +                    +DY        +   + S                 
Sbjct: 204 SKDFQLLSNPKQATFPASTPD--SCLDYIAGYVKNGQPFTRLSAWV---------PEEAV 252

Query: 292 LSDHCPISID 301
            SDH P+  +
Sbjct: 253 ASDHRPVVTE 262


>gi|254495900|ref|ZP_05108809.1| endonuclease/exonuclease/phosphatase family protein [Legionella
           drancourtii LLAP12]
 gi|254354882|gb|EET13508.1| endonuclease/exonuclease/phosphatase family protein [Legionella
           drancourtii LLAP12]
          Length = 221

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 86/253 (33%), Gaps = 40/253 (15%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAK----VFPKNTWCIFYST--ERLINHSKRDSNNDI 110
           +R+    L+ D VFLQE+   +   +     +P +  C + +        ++K       
Sbjct: 1   MREAITELNPDFVFLQEVQGEHRKRQKRINAWPDSPQCEYIAENIWPHYAYAKNAIYQSG 60

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           H   A+  K       +  L        R  +R  +   + ++G  + +L +HL  F   
Sbjct: 61  HHGNAILSKYAFRRIDNINLASI-----RRASRGILHAQLMVDGATVHLLCVHLGLFK-- 113

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                         ++QA  L   I +      P ++AGDFN   N L     F + ++ 
Sbjct: 114 -----------RERAEQATALMRRIKEVVPLNEPLLMAGDFNDWRNVLS--QPFAEDLNV 160

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            ++ +    +      +   +R  + +D         + +                   +
Sbjct: 161 EEAFVSLEGQH---ARSFPAIRPALCVDRVYFRGMRVQEVAC-----------LQGKPWR 206

Query: 291 RLSDHCPISIDYD 303
            LSDH P+   ++
Sbjct: 207 MLSDHLPLYARFE 219


>gi|256394880|ref|YP_003116444.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928]
 gi|256361106|gb|ACU74603.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928]
          Length = 294

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/273 (10%), Positives = 66/273 (24%), Gaps = 56/273 (20%)

Query: 59  QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++ K   AD+V LQE+        A +     W    +           +       +A+
Sbjct: 24  EWLKATPADVVCLQEVRAEPDQFPADLRAPEGWHTLVAP----------AAAKGRAGVAL 73

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +      +        D+  R          + +    + +  ++L +       +  
Sbjct: 74  FSRVAPTTTRIGFGTPEFDTAGR-------YAEMHLP--TLTIASLYLPTGEVGTERQAE 124

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------YLGN 220
                +        L    T+  ++    +I GD+N   +                    
Sbjct: 125 KERFMAGFHAHLSALS---TEAAQTGRAILICGDWNIAHDKADIKNWRANQKSSGFLPEE 181

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLI 271
                  +                         +           IDY +   N      
Sbjct: 182 RQWLTSVLTEAGYADVVRNLHPGVDGPYSWWSFRGKAFDNDTGWRIDYQMASANLAALAT 241

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      +   +  +R SDH P++  YD+
Sbjct: 242 SA-------KVERAATYAERWSDHAPVTCAYDW 267


>gi|223932412|ref|ZP_03624414.1| exodeoxyribonuclease III Xth [Streptococcus suis 89/1591]
 gi|330832647|ref|YP_004401472.1| exodeoxyribonuclease [Streptococcus suis ST3]
 gi|223898866|gb|EEF65225.1| exodeoxyribonuclease III Xth [Streptococcus suis 89/1591]
 gi|329306870|gb|AEB81286.1| exodeoxyribonuclease [Streptococcus suis ST3]
          Length = 275

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 82/306 (26%), Gaps = 56/306 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE    +     
Sbjct: 1   MKLISWNIDSLNAALTAESPRALLSR------AVIDTLVTEDADIIAIQETKLSDKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++        S  +     +       KN      ++P +GA  +    G  
Sbjct: 55  KHLEILESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLSPTITFPEIGAPTTMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        +S  
Sbjct: 114 -----IITLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQYADYLAKL--------DSHK 160

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N                   +       +  +        F        NA 
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +    +           DH PI
Sbjct: 221 TWWAQRSRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYDF 304
            ++  F
Sbjct: 270 VMEISF 275


>gi|116748060|ref|YP_844747.1| endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697124|gb|ABK16312.1| Endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans
           MPOB]
          Length = 291

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 34/283 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++++N+   ++ +G +       R      ++ +        ++  QE      +  +
Sbjct: 40  MRVMTFNLRFENDSDGEN-------RWGCRRDMVARIVARYGPSVLGTQEGMVSQ-LRFL 91

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y+  R  + S +         +    +         P +    S+  A  R
Sbjct: 92  EEHLQGYELYAPRRFWDESCQYPTLFYRRDVMRPLEGDEFWLSLTPRVHRSKSWDSAFPR 151

Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  E   +G+ +WV   HL                 +  + QA+ + +W       
Sbjct: 152 MISFGRFESLEDGRAVWVGVTHLDHIG------------DAARAAQAERVAEWAC---GR 196

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               ++ GDFN       +        D  ++L R   E     +    +     +D+ +
Sbjct: 197 DGSCILMGDFNDVPGSPAHRLLTDVLQDCWEALGRSEDESGMTYHKFTGIPQIARMDWVL 256

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             ++            +       +  G+  SDH P   D  +
Sbjct: 257 ASRDM---------RVLDQVVVRDQESGRYPSDHFPCFADVKW 290


>gi|67526289|ref|XP_661206.1| hypothetical protein AN3602.2 [Aspergillus nidulans FGSC A4]
 gi|74596539|sp|Q5B778|CCR4_EMENI RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|40740620|gb|EAA59810.1| hypothetical protein AN3602.2 [Aspergillus nidulans FGSC A4]
 gi|259481873|tpe|CBF75800.1| TPA: Glucose-repressible alcohol dehydrogenase transcriptional
           effector (EC 3.1.13.4)(Carbon catabolite repressor
           protein 4)(Cytoplasmic deadenylase)
           [Source:UniProtKB/Swiss-Prot;Acc:Q5B778] [Aspergillus
           nidulans FGSC A4]
          Length = 675

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/357 (12%), Positives = 88/357 (24%), Gaps = 69/357 (19%)

Query: 16  CTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
             A+   KV ++S+N    S   Q       + V         +    +  D DI+ LQE
Sbjct: 301 TAATSPDKVSVLSYNTLCDSSATQSHYGYAPSRVLSWEFRRETILNELRAHDPDIICLQE 360

Query: 74  MG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           +     +     ++   +   +F+   R +   + D+      A   +     +L +   
Sbjct: 361 IDQGSYNEFFREQLAYSDYKGVFWPRGRAMGMQEEDAKGVDGCATFFKGSKFILLDKQVI 420

Query: 130 LLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDS-- 172
             G             D ++R   +  + ++V       G +  +++ HL          
Sbjct: 421 NFGQTAVRRPDAKGQDDIYNRLWQKDHIAVIVFLENRQTGSRFIIVNAHLYWDPAFKDVK 480

Query: 173 ---------------------LENTYSPSCSLLSQQAQWL----KDWITQKKESLVPFVI 207
                                   T   +      Q +                 +P  +
Sbjct: 481 LIQTAILMEEITKHSEKYAKWPPCTDKAAFRFREAQGEQTMPEPAPSAEYASGDQIPLFM 540

Query: 208 AGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC-----NA 247
            GDFN        N                  +  +        F  +            
Sbjct: 541 CGDFNSSPGSAAYNLIANGGLIEEHPDLEKRMYGNLSKVGMTHPFKLKSAYGAIGELSFT 600

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYD 303
           N     K  +DY     N           +  Y +           SDH  +  ++ 
Sbjct: 601 NYTPDFKDILDYIWYSSNTVHVSGLLGEVDKDYLQRVPGFPNYHFPSDHIALLAEFS 657


>gi|317182729|dbj|BAJ60513.1| exodeoxyribonuclease [Helicobacter pylori F57]
          Length = 250

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 81/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTHLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|261200457|ref|XP_002626629.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis
           SLH14081]
 gi|239593701|gb|EEQ76282.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis
           SLH14081]
          Length = 297

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/293 (11%), Positives = 77/293 (26%), Gaps = 21/293 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        K    R       L  ++++     + LQE+        
Sbjct: 8   PLRILTHNIRY-ATSAPFRGEKPWKDRKQRLINELHYHSRHNPETFICLQEVLHVQLTDI 66

Query: 83  VFPKNT---------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +   N          W            +   S      A+   +++  V     P +  
Sbjct: 67  LSGLNPNANKDATAEWAYIGVGRDDGKQAGEFSPIFYRPAVWELEESKTVWLSETPSVP- 125

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
              +  +  R     + +    +  VL ++       D    +   +  L+         
Sbjct: 126 SRGWDASSVRIITIGVFKHIVSRKRVLGMNTHL---DDQGSKSRYEAAKLILGLINQFLT 182

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
                  ++    +AGDFN + N    +       + +D    +    +           
Sbjct: 183 KNQLAGRNINGVFLAGDFNSEENQEAYSVLTAADSQLVDAQKQVNAAFRYGSENTYTGFG 242

Query: 251 LR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                   IDY +        +      +      +    G   SDH  +  D
Sbjct: 243 YEDEGPKRIDYVLFGPQRGANM--SWIVDGYAVLPNKFDDGVLNSDHRAVVAD 293


>gi|118592105|ref|ZP_01549499.1| hypothetical protein SIAM614_25552 [Stappia aggregata IAM 12614]
 gi|118435401|gb|EAV42048.1| hypothetical protein SIAM614_25552 [Stappia aggregata IAM 12614]
          Length = 323

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 88/332 (26%), Gaps = 60/332 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77
           ++L ++N+ +  E       ++     T     LR     L+ADI+ LQE+ +       
Sbjct: 1   MKLATFNMESFGED------RHDPDALTPRLDALRPKILELEADILCLQEVNAQKIKGMA 54

Query: 78  ----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                A+  +     +  F+         K          + V  +       S     A
Sbjct: 55  ARQFQALDLLLEGTPYEGFHRATSERLSGK---GPGDRHNLVVLSRFPITRFFSLYQTHA 111

Query: 134 KDSFSRAGN--------------RRAVELLVEIN-GKKIWVLDIHLKSF------CFLDS 172
                +                 R  +++ ++I  G+ + V  +HL++            
Sbjct: 112 HPPQWQPKTAEPAYHGPQTILFDRPVLQVEIDIGTGRPLHVFCVHLRAPVAAMIRGGKGE 171

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQ-----------KKESLVPFVIAGDFNRKIN----- 216
                S S      Q   LK                        V+ GDFN         
Sbjct: 172 DRTWSSVSAWAEGYQLSVLKQTAQALELRLAVESLFDANENSHIVLVGDFNATGETGTLR 231

Query: 217 --YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                 +D     +               +     +      +D+ +   +     I   
Sbjct: 232 LLRADPDDTGSPKLAGRRLYQLDASLPAEKRQTVIHKGKGQALDHILASASMAHRTIDLK 291

Query: 275 FSEILYNED--DIKSRGKRLSDHCPISIDYDF 304
              +   ++  D +      S H  +  +++F
Sbjct: 292 VFNVGLPDEVFDAEEDTYAGSFHAAMLAEFEF 323


>gi|319411745|emb|CBQ73789.1| conserved hypothetical protein [Sporisorium reilianum]
          Length = 300

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 95/302 (31%), Gaps = 34/302 (11%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V    +    +  V+ N+  L      +   +      ++   + +     + D++ +QE
Sbjct: 19  VSTAPTSTDSLTAVTMNVAGLPAILNGNGEGDK----QANSVAIGKKFVEYNYDVINVQE 74

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             +Y+A         +       R          + ++T   +   N+  ++ S   L  
Sbjct: 75  DFNYHA-------YIYNNDDHPYRTPTSGGVPFGSGLNTLSTIAFTNLDRVKWSKCNLNE 127

Query: 134 KDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            D  +    +    + +++  G ++ V ++H+ +             S +  S  AQ  +
Sbjct: 128 GDCLT---PKGYTVVTLQLPTGGEVDVYNLHMDAGSDDGD-------SAARTSNFAQVAQ 177

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNN----------DDFWKTIDPNDSLIRFPKEKD 242
              ++   +    ++ GD N +     +            D W  +              
Sbjct: 178 AIASRSDAAGRAVIVMGDTNSRYTRPKDGLVQFLAETKLTDTWVELVRGGKAPASTDAAL 237

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +      +   +D  +   ++   L    +           S+GK LSDH PI + +
Sbjct: 238 LCADPIPTTTDCEVVDKVLYKNSSTVTLRPSDWQ--YLGTQFTDSQGKPLSDHTPILVKF 295

Query: 303 DF 304
            +
Sbjct: 296 AY 297


>gi|209694891|ref|YP_002262819.1| putative exported nuclease [Aliivibrio salmonicida LFI1238]
 gi|208008842|emb|CAQ79049.1| putative exported nuclease [Aliivibrio salmonicida LFI1238]
          Length = 890

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/384 (9%), Positives = 94/384 (24%), Gaps = 104/384 (27%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLDADIVFLQ 72
           + + + S+N+        ++   N   +                +      +DADI+ L 
Sbjct: 483 EDLTITSFNVLNYFTSVSINGDANPTGQNRGATTADEFAIQQAKILSALTAIDADIIGLM 542

Query: 73  EMGSY--------NAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           E+ +         + +  V        ++ +             +   ++ I  A+  R 
Sbjct: 543 EIENNGFGENSAIHDLTAVLNAQFEDKEDHYKYVEIDAADKYQGEYLGSDAIMVALLYRP 602

Query: 119 KNVRVL------------------QQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIW 158
             VR+                    +        +       R ++     +    + + 
Sbjct: 603 DKVRLEGDARVIKTPEQHVTANTVTRDNNGTIESNPAYDKYQRHSLVQEFIVKEAKEPLT 662

Query: 159 VLDIHLKSFCF-----------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           V+  HLKS                   +             + + D ++  +      +I
Sbjct: 663 VVVNHLKSKGSECIEQWQNFNEDSEAPDLQGNCNRFRVSAVKAIGDELSTVEGD---ILI 719

Query: 208 AGDFNRKINYLG-----------NNDDFW-----------------------KTIDPNDS 233
            GD N                   + D +                       +       
Sbjct: 720 LGDMNAYGMEDPLLTLTDYSPDKYDRDIFTASYTTLGNDTAGNPIPYEETGSQIKKGYGY 779

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291
           L        +   +         +D+ + +++  K + Q     I   E ++     +  
Sbjct: 780 LNLNTLLHSTETFSYTYSGELGNLDHALANESLAKRVTQIEDWHINATESNLFEYSSKYT 839

Query: 292 -----------LSDHCPISIDYDF 304
                       SDH P+ I  ++
Sbjct: 840 GDMAKYNDMYSASDHDPVVISLEY 863


>gi|171692387|ref|XP_001911118.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946142|emb|CAP72943.1| unnamed protein product [Podospora anserina S mat+]
          Length = 294

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 84/288 (29%), Gaps = 20/288 (6%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81
            +RL+++N+   + +  V   +    R     + L+      D+  + LQE+        
Sbjct: 16  PIRLITFNVRY-ATKTPVPGEEPWSIRCPKLCSQLKFITSGQDSPFICLQEVLYSQLTDI 74

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    N W            +   S           ++         P L +K  +  A 
Sbjct: 75  QDRLGNAWRHIGQGREDGKQAGEFSPIFFRVDHWECERQKTYWLSKTPDLPSK-GWDAAL 133

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     L         V+ +      F    +     S  LL + ++      +  + +
Sbjct: 134 ERVVTVGLFRHKDTGARVVVMSTH---FDHRGKVAREESAKLLLEISRTWTA--SASRGT 188

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI------ 255
            VP  + GDFN   +               D      ++                     
Sbjct: 189 QVPAFLGGDFNSTPSDGAYKVLAAPDSGMTDISQLVQQDDRYGNQDITYTSFGEPEETPK 248

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ID+  + ++  + L   +F  +    DD+      LSDH  +  D +
Sbjct: 249 RIDFLFVRES--QQLTSRNFGILPNRFDDM----VYLSDHRAVVADME 290


>gi|168066199|ref|XP_001785029.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663378|gb|EDQ50144.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 561

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/353 (12%), Positives = 94/353 (26%), Gaps = 68/353 (19%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            S +    L+S+NI  +  +  +  S         T     L +      ADI+ LQE+ 
Sbjct: 201 QSSSGTFTLLSYNILSDLYANSDQYSYCPPWALAWTYRRQNLLREIVAYRADILCLQEVQ 260

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQS------ 127
           S +      P      + S  +                 A   R+    ++++       
Sbjct: 261 SDHYEEFFAPGLEKHGYTSIYKKKTGEVYTGSIYVIDGCATFFRRDRFSLVKKYEVEFNK 320

Query: 128 ---------YPLLGAKDSFSRAGNRRAVELLVEING-----KKIWVLDIHLKSFCFLDSL 173
                     P            +  A+ +++E            V    ++  C  D+ 
Sbjct: 321 AAQSLSEALIPTTKKAALSRLLKDNVALIVVLEARDTGGFMGTQAVPGKRVQLLCVADTH 380

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGN------------ 220
            +       +   Q   L   + +    + +P ++AGDFN       +            
Sbjct: 381 IHANQELKDVKLWQVHTLLKGLEKITASADIPMLMAGDFNSVPGSAPHCLLSTGHVDPSH 440

Query: 221 --------------------------NDDFWKTIDPNDSLIRFPKEKDSRC----NANKN 250
                                      + F +    + ++ +  +  D         N  
Sbjct: 441 PDLQVDPLNILRPASKLCHSLPLVSAYESFARMNGIDPTVEKQRRRMDLTTSEPQFTNCT 500

Query: 251 LRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +DY      +     + E   E    +D      +  SDH  + +++
Sbjct: 501 RDFLGTLDYIFYTVDSLTVESLLELLDEDTLRKDTALPSPEWSSDHIALLVEF 553


>gi|297583616|ref|YP_003699396.1| exodeoxyribonuclease III [Bacillus selenitireducens MLS10]
 gi|297142073|gb|ADH98830.1| exodeoxyribonuclease III [Bacillus selenitireducens MLS10]
          Length = 254

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 75/305 (24%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         + +   AD+  +QE+        +
Sbjct: 1   MKLISWNVNGLRACIRKGF---------------LSFFEEAGADLFAVQEIKLQEGQVDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                    V        G  +   ++  R
Sbjct: 46  -DLQGYRQYWNYAEKKGYSGTAVFTK-------------VEPLRVFRNGVGNERQQSEGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     ++++++  +     +  +             Q L+        +  
Sbjct: 92  I-----LTLEFASFFLVNVYTPNSQRDLARLHERLQWEDAFYAYLQELE--------NEK 138

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +                        +     +  +      +  A 
Sbjct: 139 PVIVCGDMNVAHEEIDLRNAKSNRGNSGFTTEERAKMTRLQSEWLIDSYRYYYPDQEGAY 198

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++       +   S                  SDHCPI 
Sbjct: 199 TWWSYMKTVRERNIGWRIDYFLVSDKLKSAMNDVSI-----------YSDVLGSDHCPIG 247

Query: 300 IDYDF 304
           +   F
Sbjct: 248 LTMAF 252


>gi|157127237|ref|XP_001654881.1| ap endonuclease [Aedes aegypti]
 gi|108872984|gb|EAT37209.1| ap endonuclease [Aedes aegypti]
          Length = 612

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 80/301 (26%), Gaps = 76/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++ SWN+  L    G                    + ++   DI+ +QE      V   
Sbjct: 360 FKISSWNVAGLRSWVGKGG---------------LDFFEHEKPDILCIQE---TKCVDDQ 401

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+    I         H         +  +A+  K +          G  D    A  R
Sbjct: 402 LPEEVRHI------KGYHPYWLCKPGGYAGVAIYSKKMPFNVT----YGLGDEEQDADGR 451

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +    +K +++ +++ +                   +  + L        ++  
Sbjct: 452 L-----LTAEYEKFFLVCVYVPNAGRGLVTLPKRMRWDEKFHKYLKDL--------DAKK 498

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +     +  F +    +  A 
Sbjct: 499 PVILCGDMNVAHEEIDLANPKTNKKNAGFTPEEREGMTKLLSLGFVDTFRQLYPEQSGAY 558

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            +DYF+  +     ++           D++   G   SDHCP++
Sbjct: 559 TFWTYMGNARAKNVGWRLDYFITSERFVGKVV-----------DNVIRSGVYGSDHCPLT 607

Query: 300 I 300
           +
Sbjct: 608 L 608


>gi|83593119|ref|YP_426871.1| exodeoxyribonuclease III [Rhodospirillum rubrum ATCC 11170]
 gi|83576033|gb|ABC22584.1| Exodeoxyribonuclease III [Rhodospirillum rubrum ATCC 11170]
          Length = 266

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 76/304 (25%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V + ++N+N                   +    L  +      D+  LQE+     + + 
Sbjct: 2   VSIATFNVN----------------SVKARLPNLLDWLGTRSPDVALLQEI---KCLDEA 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGN 142
           FP+       +    + +         +  +A+  +          P L    +      
Sbjct: 43  FPR-------AEIEALGYRLAVHGQKAYNGVAILSRLPLSEVTARLPGLDGAPAEDDDQA 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    ++      +  V  ++L +   ++           +     +             
Sbjct: 96  RYLEAVV----DGRFRVCCLYLPNGNPVEEDRKFGYKLAWMDRLIVRATHLMRDF---PD 148

Query: 203 VPFVIAGDFNRKINYLGNND---DFWKTIDPND-----------SLIRFPKEKDSRCNAN 248
            P ++ GDFN   + L   D        +   +                 +  +      
Sbjct: 149 TPVILGGDFNVCPDDLDVYDPAGWANDALCRPETRQRFRALVFLGYTDALRALNPGAPLF 208

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID+ +++  A   L            D       + SDH P  
Sbjct: 209 TFWDYQAGAWQKDHGLRIDHLLLNPAAADRLSAAGV-------DRATRGHAKSSDHAPSW 261

Query: 300 IDYD 303
           +  +
Sbjct: 262 VTLE 265


>gi|163839057|ref|YP_001623462.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209]
 gi|162952533|gb|ABY22048.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209]
          Length = 288

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 86/320 (26%), Gaps = 71/320 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P +   A  VR+ S N+N +                      +  +    D DI+ LQE+
Sbjct: 7   PTSKKAADAVRIASVNVNGIRASYRKG---------------MADWLAARDVDILCLQEV 51

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            + + V + F    W + ++           + +     + +  +   +   +       
Sbjct: 52  RAPDDVVEGFLAQDWHLLHAE----------AADKGRAGVLIASRKDSLEPIATRTGIGD 101

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D F+  G R          GK++ V+  ++ S       ++       ++  +   L   
Sbjct: 102 DYFATTG-RWVEADYKLSGGKQLTVVSAYVHSGEVNTPKQDDKYRFLDVMLTRMPELAA- 159

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---------------------IDPNDS 233
                      +I GD N     L   +                          +     
Sbjct: 160 ------HSDYALIVGDLNVGHTTLDIKNWKGNVKNAGFLPEERAYFDRFFSANDLKDGLG 213

Query: 234 LIRFPKEKDSRC-NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
                +E   +          +           IDY +     +               D
Sbjct: 214 WKDVQREVAGQVEGPYTWWSQRGQAFDNNTGWRIDYQMATPELFAAAGDV-------VVD 266

Query: 284 DIKSRGKRLSDHCPISIDYD 303
              S   R SDH P+ +DY+
Sbjct: 267 RAASYDTRRSDHAPLVVDYN 286


>gi|326335986|ref|ZP_08202163.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691950|gb|EGD33912.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 253

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 86/302 (28%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+N+N +                        Q+      D++ LQE+ +  +   +
Sbjct: 1   MKIFSYNVNGIRAAMSKGF---------------VQWLSAASPDVICLQEIKALESQIDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            H    +    ++ +A+  K        +  +G    +     R
Sbjct: 46  LA-------LEEAGYRYHYFHSAEKKGYSGVAILSKKEP----EHVEIGTGIDYMDKEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + ++ ++L S   +D              Q     + +I   K+   
Sbjct: 95  I-----LRAEYGDLSIMSLYLPSGTNID--------RLDHKLQFMADFQKYINTLKKVHP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF------------WKTIDP--NDSLIRFPKEKDSRCNANK 249
             VI GD+N     +  +D               K +D       I   +  +   +   
Sbjct: 142 NLVICGDYNICHEAIDIHDPIRNANVSGFLPVERKWLDDFLKSGFIDSFRFFNKEPHNYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++ Q     +++ +                + SDHCPI +
Sbjct: 202 WWSYRANARANNKGWRIDYCLVAQPLESRIVRAAIL-----------PEAKHSDHCPILV 250

Query: 301 DY 302
           + 
Sbjct: 251 EI 252


>gi|325179666|emb|CCA14064.1| carbon catabolite repressor protein putative [Albugo laibachii
           Nc14]
          Length = 607

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/341 (12%), Positives = 91/341 (26%), Gaps = 60/341 (17%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            R++S+N+     + ++        V        LL+    + +ADI+ LQE+   +   
Sbjct: 256 FRVLSYNVLAELYATRQLYPYCPMWVLSWNFRKELLKNELHSYNADILCLQEVQGDHYKT 315

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----------- 130
             +P  +   +       +         +       K+N  +L++ +PL           
Sbjct: 316 FFYPMMSEWGYDGWYLKKSRESMGLEGKVDGCALFYKRNRFILKEQHPLEFNTAACDFAS 375

Query: 131 -----LGAKDSFSRAGNRRAVELLVE-----------------INGKKIWVLDIHLKSFC 168
                       S A +R A +L ++                     +           C
Sbjct: 376 SVMQDFELTYPNSTASSRDASQLRLKTRLMRDNVGQIAILEAVPPNNEFSKKPHSGPMLC 435

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNN------ 221
             +    +      +   Q   L   I +      +P V+ GDFN + +           
Sbjct: 436 VANVHIFSNPKFPDVKMWQTFTLVKKIERILSGRDLPVVLCGDFNSEPSSAVYQFLSRNH 495

Query: 222 --------DDFWKTIDPNDSLI-------RFPKEKDSRCNANKNLRNKIPIDYFVMDQN- 265
                          +  +               +      N        +DY     + 
Sbjct: 496 VASDHEDLQPLASVFNSIEIAHCLALASSYASVFRSEPEYTNYTGHWTGVVDYVWYTPSN 555

Query: 266 --AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +  L   S   +           +  SDH P+ +D+ F
Sbjct: 556 LALFAALKMHSPETLEAYAKTPLPNCQHTSDHVPLCLDFSF 596


>gi|320533420|ref|ZP_08034105.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320134357|gb|EFW26620.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 269

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 80/309 (25%), Gaps = 69/309 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  + +  D D + +QE+         
Sbjct: 1   MRLATWNVN----------------SIRTRVDRVLAFLEREDIDALAMQEIKCRPD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +A+  +       +          S+   +
Sbjct: 41  ------QFPVEPFEAAGYELAIHGLNQWNGVAIASRVGLGDV-ATSFPEQPAWASKPEAK 93

Query: 144 RAVELLVE-------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             VE            + K + +  +++ +   L     TY           + L+D + 
Sbjct: 94  PVVEARALGATVGTASDAKPVRLWSLYVPNGRELTHSHYTYKLD------WLRVLRDDVA 147

Query: 197 QK--KESLVPFVIAGDFNRKINYLGNNDDF-----------WKTIDPNDSLIRFPKEKDS 243
               +E  +P  + GD+N         D              +      +     +    
Sbjct: 148 AWLEEEPDLPLALVGDWNVAPRDEDVWDMSVFEGATHVSSPEREAFAAFAEAGMREVTRE 207

Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           R                   + ID+          +   +        D  + +GK  SD
Sbjct: 208 RVTNYTYWDYQKLRFPRNEGMRIDFVYASPALAGRVTGAAI-------DRDERKGKGASD 260

Query: 295 HCPISIDYD 303
           H P+ ++ D
Sbjct: 261 HVPVIVEVD 269


>gi|312069344|ref|XP_003137638.1| CCR4-NOT transcription complex subunit 6 family protein [Loa loa]
 gi|307767201|gb|EFO26435.1| CCR4-NOT transcription complex subunit 6 family protein [Loa loa]
          Length = 590

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/348 (13%), Positives = 90/348 (25%), Gaps = 71/348 (20%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  +     S   +           + +  ++ +ADI+ LQE+ +    
Sbjct: 216 TFTVLCYNVLCDKYATNSLYSYCPSWALNWEYRKAAILKEIRHYEADIITLQEVETEQFR 275

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLLGAKDSFS 138
               P+     +       + +K     +       A+  K  +   +   L+       
Sbjct: 276 CLFQPELEQIGYAGIFSPKSRAKTMGEEERKFVDGCAIFWKYDKFELEKEHLIEFTQVAI 335

Query: 139 RAGN-------------RRAVELLVEIN------------------GKKIWVLDIHLKSF 167
           R                  A+  + +I                   G  + V   H+   
Sbjct: 336 RKAPTSEKILNRVMPKDNIALCAVFKIKENVYANRQMTMAPSDNVVGNPLVVSTAHIHW- 394

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINY------- 217
                  +       +L Q+   L D I+++       +P +I GD N            
Sbjct: 395 --DPEFCDVKLIQSMMLVQEINTLLDEISERYRITPQQIPVLICGDLNSLPESGVVEFLS 452

Query: 218 ------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPI 257
                           D        +D    +       C          N  L  K  I
Sbjct: 453 KGAISREHPDLKEFRQDPCITRFSASDDPTVYTHALRLDCAVDPNSMPFTNYTLEFKGVI 512

Query: 258 DYFVMDQNAYKF---LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           DY      +      L   +   +L N+          SDH PI   +
Sbjct: 513 DYIFSTPQSLARLGVLGPLNMEWVLANKIIGFPHPHVPSDHVPIMAQF 560


>gi|167031164|ref|YP_001666395.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1]
 gi|166857652|gb|ABY96059.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1]
          Length = 284

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 83/292 (28%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   + +     D D+V L
Sbjct: 28  PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHNGRAGNLQKIGKLLG--DFDLVAL 85

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE    +  +    +                  R+       +  V  +    L + +PL
Sbjct: 86  QEADGGSLRSGYVNQVEHLAHLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQLLEDHPL 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    + Q  +
Sbjct: 146 PGPAG-------RGAILVRFGEGKDALIVVMMHLALG-------------AKTRALQLGY 185

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N     L  +    + +      +              +
Sbjct: 186 IRELIGGY----RHQVLMGDMNTHATDLLEHSPL-RDLGLVAPQVEAT---------FPS 231

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++  +     ++     I              SDH P++++ 
Sbjct: 232 WRPQRCLDHILLSPSLTLERVEVLAQPI--------------SDHLPVAVEI 269


>gi|188528295|ref|YP_001910982.1| exodeoxyribonuclease III [Helicobacter pylori Shi470]
 gi|188144535|gb|ACD48952.1| exodeoxyribonuclease [Helicobacter pylori Shi470]
          Length = 250

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLVSWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQD 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +       +   D   R    
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVSYGINIEEHDKEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V    +  +++++++ +     S  +          +  + L+           
Sbjct: 91  -----VVTCEFELFYLVNVYVPNSQQALSRLSYRMSWEVEFRKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSHPLKTRLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|293610563|ref|ZP_06692863.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826907|gb|EFF85272.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 280

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 82/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD+V +QE   ++    +
Sbjct: 20  LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 64

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V  +        DS  R   
Sbjct: 65  KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSVKDGLGFELADSQGRF-- 112

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++     + +  ++L S    +        + +            + Q ++ 
Sbjct: 113 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 162

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD+N     +   +                +   I      +   +   +   
Sbjct: 163 NKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAE 222

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +     I                + +  SDH P
Sbjct: 223 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTINAWV-----------YKDQWFSDHAP 271

Query: 298 ISIDY 302
           + IDY
Sbjct: 272 VIIDY 276


>gi|237720081|ref|ZP_04550562.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293373921|ref|ZP_06620263.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|299147955|ref|ZP_07041018.1| putative secreted protein [Bacteroides sp. 3_1_23]
 gi|229450633|gb|EEO56424.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292631142|gb|EFF49778.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|298514138|gb|EFI38024.1| putative secreted protein [Bacteroides sp. 3_1_23]
          Length = 519

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 83/281 (29%), Gaps = 54/281 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R++++NI   +  + V            +Y         ++ D+V LQE+      +
Sbjct: 49  GNLRVLTFNIRHCAGNDDVI-----------NYDRTAAVINGMEPDVVCLQEVDYMTTRS 97

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +       +                     +  K   +  ++YPL G       A 
Sbjct: 98  NKVDQLKTLADKTGMNHYFSKSIA-YQGGEYGNGLLFKGTPISTKTYPLPG-------AE 149

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R A     E       V+  HL                 +   + A+ L D        
Sbjct: 150 LRSAAIAEFE----NYVVISTHLAL-------------EENNRVESAKQLTDLAKTY--- 189

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
                +AGDFN  +     N  F+  +     ++   +       A K       ID+ V
Sbjct: 190 NKVVYMAGDFNEDL----MNGTFFTELKKEWEVVSSTENTFPTGQATK------RIDFVV 239

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +     +++ +    L   +   +     SDH P+  D+
Sbjct: 240 TLKTPPTIVVKSNVIYNLDGVNVAIT-----SDHYPLYCDF 275



 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 72/251 (28%), Gaps = 43/251 (17%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           DY    +    ++ADIV LQ +      ++   +    +          +K         
Sbjct: 309 DYDRTGRIIAKMNADIVCLQGLDKETERSEGIDQLN-VLAQKANMHDYFAKAIDYKGGEF 367

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + +  K   V    Y          ++  R A+ +  E    K  V   +       D+
Sbjct: 368 GVGILTKEEPVSVDRYQ------MAGKSEMRAAMVVEYE----KFVVASTNF------DT 411

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                  +   L  +                P  + G FN          +F++ +  N 
Sbjct: 412 DMAKRIEALQTLETKLSAYNK----------PAFLLGYFN----EGDLESEFFQMVKSNW 457

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +L+   K  +           K  +D+ V  ++    + Q    E L   D         
Sbjct: 458 NLLSADKSTEVS-------GKKRRLDFIVSLKSHNVNVTQADVIESLSGVDVTV-----A 505

Query: 293 SDHCPISIDYD 303
           S H P+  D+ 
Sbjct: 506 STHYPLFCDFS 516


>gi|254476066|ref|ZP_05089452.1| exodeoxyribonuclease III [Ruegeria sp. R11]
 gi|214030309|gb|EEB71144.1| exodeoxyribonuclease III [Ruegeria sp. R11]
          Length = 262

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/306 (9%), Positives = 67/306 (21%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       ++ +  +    D++ LQE  S      
Sbjct: 2   PFTLATWNIN----------------SVRLREPIVVKLLEEEGPDVLCLQECKSPV---D 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P   +        +            +  +A+  +            G   +      
Sbjct: 43  KIPMEQFAALGYRHMI------ARGQKGYNGVAILSRLPIEDVGDKDFAGLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   +E     + + + ++ +    D  +   +            ++DW     +  
Sbjct: 93  ---VAGRLENG---VTIHNFYVPAG--GDVPDREVNEKFGQKLDYLTDMRDW--FHADRP 142

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
              V+ GD N         D                 +  +          +        
Sbjct: 143 EKSVLVGDLNIAPREDDVWDHKKLLKVVSHTPVEVEHFTDVMEAGGWSDVTRNDIPDGRL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                        ++ SDH P
Sbjct: 203 YSWWSYRAKDWDAADKGRRLDHVWATSDIKSSAHSS-------RVLRDARGWEKPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|55821526|ref|YP_139968.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMG 18311]
 gi|55737511|gb|AAV61153.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMG 18311]
          Length = 275

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGDSARAQLSR------AVIDTLVTENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++    +   S  +     +       K       +YP +GA  +    G  
Sbjct: 55  KHLQILEDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        ++  
Sbjct: 114 -----IITLEFDTFFVTQVYTPNAGDGLKRLLERQIWDKKYADYLAEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +     +  +         A 
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNLLNKGFIDTYRHLNGDVTGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +I+ +  +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVIKSNMIDSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|326804146|ref|YP_004321964.1| exodeoxyribonuclease III [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650889|gb|AEA01072.1| exodeoxyribonuclease III [Aerococcus urinae ACS-120-V-Col10a]
          Length = 281

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 76/305 (24%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++L+        +  + R       + +     D D++ +QE          
Sbjct: 1   MKFISWNIDSLNAALTSDSNRAQLSR------QVLETIDQYDPDLIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +     ++        S  +     +    V  K       +YP +GA +     G  
Sbjct: 55  KHQEALEEWFPDYNNAWVSSVEPARKSYAGNMVLYKKSLEPIITYPKIGAPEPMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ ++    +   ++  +                  +Q    L            
Sbjct: 114 -----IITLDFGAFYFTQVYTPNAGNGLKRLAERQVWDEKYAQYLSQLDQ--------EK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                           +  +        F           
Sbjct: 161 PLIATGDFNVAHKEIDLAHPENNHKSAGFTDEERSGFTKLLDQGFTDTFRHIHGDVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++       + +    +    +           DH PI
Sbjct: 221 SWWAQRVKTSKINNSGWRIDYFLVSDRIANAVEKSEMIDSGTRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++  
Sbjct: 270 YLEIS 274


>gi|15215119|gb|AAH12671.1| Deoxyribonuclease 1-like 3 [Mus musculus]
 gi|74178913|dbj|BAE42693.1| unnamed protein product [Mus musculus]
 gi|74186239|dbj|BAE42910.1| unnamed protein product [Mus musculus]
          Length = 310

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 34/302 (11%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           +L+ F++    ++A  +RL S+N+ +            S K       ++ +  K    D
Sbjct: 12  SLLLFILALHDTLA--LRLCSFNVRSFGA---------SKKENHEAMDIIVKIIKRC--D 58

Query: 68  IVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           ++ L E+   +      + +    N+         + +   R++  + + A   ++K V 
Sbjct: 59  LILLMEIKDSSNNICPMLMEKLNGNSRRSTIYNYVISSRLGRNTYKEQY-AFVYKEKLVS 117

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           V +  Y     +D  +   +R    +        +    I                 S  
Sbjct: 118 V-KTKYHYHDYQDGDTDVFSREPFVVWFHSPFTAVKDFVIVPLHTTPET--------SVK 168

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
            + +      D  +Q K     F+  GDFN   +Y+         +  +   +    +++
Sbjct: 169 EIDELVDVYTDVRSQWKTEN--FIFMGDFNAGCSYVPKKAWQNIRLRTDPKFVWLIGDQE 226

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISI 300
                         I   +  Q     ++  S     + +    S  + L  SDH P+  
Sbjct: 227 DTTVKKSTSCAYDRI--VLCGQEIVNSVVPRSSGVFDFQKAYDLSEEEALDVSDHFPVEF 284

Query: 301 DY 302
             
Sbjct: 285 KL 286


>gi|118374759|ref|XP_001020567.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89302334|gb|EAS00322.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 253

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 79/289 (27%), Gaps = 52/289 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            ++++ ++ +NI+  ++                +   +    +N + D++ LQE+ + N 
Sbjct: 5   ASKRINIICYNIHHGADVNDNY-----------NIQKIISTIENQNPDVICLQEVDN-NY 52

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +   +    I     + I  S           I    K   +   +  L         
Sbjct: 53  SERSLNQLQPQILTQQIQGIKESYFSPTIKNSYGILTLSKQKIIDYHTQILTTGL----- 107

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QK 198
             +R    L ++   + I                 N           Q   + + +  ++
Sbjct: 108 KEDRTFQYLKLQNGLQIIHF-------------HLNNSFDQQRSRYHQLLTIFEILDKKQ 154

Query: 199 KESLVPFVIAGDFNRKIN--YLGNNDDFWKTIDPNDSLIR-----FPKEKDSRCNANKNL 251
            +     +I GDFN   +       +  +  ++                           
Sbjct: 155 LDIKNNTIICGDFNEDCDGQRYCEEECVFDLLEQKKFFNAKKLYEQKSGTQDNLYTFSRK 214

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              I ID+F +  +               N +  K      SDH PI +
Sbjct: 215 YKNINIDHFYVTNDI--------------NINSFKIIDSDASDHNPIFL 249


>gi|30250127|ref|NP_842197.1| exodeoxyribonuclease III:exodeoxyribonuclease III xth [Nitrosomonas
           europaea ATCC 19718]
 gi|30139234|emb|CAD86104.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Nitrosomonas
           europaea ATCC 19718]
          Length = 257

 Score = 78.1 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 87/307 (28%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N L    G                 L  +    +AD++ +QE+ +       
Sbjct: 1   MRIITLNVNGLRSAAGKG---------------LFDWLPRQEADVICVQELKAQQGDING 45

Query: 84  F--PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + +  ++       +S                 +  +     P +  +  F    
Sbjct: 46  VMRAPDGYSGYFHCAEKKGYSGVGLYTRY-------SPDQIIEGTGIPEIDMEGRF---- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   + ++   + V+ I+L S    +  +              Q L +        
Sbjct: 95  --------LRVDFGNLTVISIYLPSGSSGEHRQAAKFFFMEHFLPLLQSLAE-------C 139

Query: 202 LVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N                   +L     +  T+     L+   ++ +   +
Sbjct: 140 GREVLLCGDWNIAHKAIDLKNWRSNQKNSGFLPEERAWLSTVFDELKLVDVFRKINPEPD 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             + +R SDH P
Sbjct: 200 QYTWWSNRGQAWAKNVGWRIDYQIATPGLAAMATGVSI-----------YKAERFSDHAP 248

Query: 298 ISIDYDF 304
           ++IDYDF
Sbjct: 249 LTIDYDF 255


>gi|312881217|ref|ZP_07741015.1| sphingomyelinase/beta-hemolysin [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309371109|gb|EFP98563.1| sphingomyelinase/beta-hemolysin [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 1221

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 86/311 (27%), Gaps = 39/311 (12%)

Query: 23   KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++R+++ N+                +R      L          D+V L E+ +     K
Sbjct: 728  QLRVMTANV--FLINSTTVGGNAKDERVEEYLKLKNDLFGFT--DVVALTEVFNQKHADK 783

Query: 83   VFPKNTWCIFY-----STERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDS 136
                              +  +        N I +  + V  +   + +  +        
Sbjct: 784  FASGLGLNYHTPILGTEGDWNLTEDNHSILNGIKSGGVMVLSRYPILSKSQHIFSSFCAE 843

Query: 137  FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               A  +  + + ++ + K   V+  H ++    D    + S +      Q   + D+I 
Sbjct: 844  DGLAA-KGFIHVRIKKDWKIYNVIATHTQA----DPSVFSCSNANQTRLAQLAEINDYID 898

Query: 197  QKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            +K  +      I GD N              ++   + + R  +        +       
Sbjct: 899  RKITDKSEYVYILGDMNIDKYDSSTYAKMLTSLHAPEPVYRGMRYSWDYEKNSLAFAYNY 958

Query: 256  P-----------IDYFVMDQNAYKFLIQESF-----------SEILYNEDDIKSRGKRLS 293
                        +D+ + D    K     +              +    +  +     LS
Sbjct: 959  RSSYVQNHAPQLLDHVLYDNRYAKPRYWNNVILDPVAKQRVEVTVNIMGNKDRYHYPDLS 1018

Query: 294  DHCPISIDYDF 304
            DH P SI +++
Sbjct: 1019 DHFP-SIGFEY 1028


>gi|327540346|gb|EGF26932.1| exodeoxyribonuclease III [Rhodopirellula baltica WH47]
          Length = 256

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/305 (8%), Positives = 75/305 (24%), Gaps = 74/305 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++L+SWN+N +                       R++ ++   D++ LQE  +     
Sbjct: 3   ETLKLISWNVNGIRASMDKGF---------------REFVESEQPDVLCLQETKAEPEQV 47

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +                       ++ ++   +   +       +   D+  R  
Sbjct: 48  DLSWADELGYHQVWNTATKRG--------YSGVSTWSRVEPLKVTKGLSIEEHDNEGR-- 97

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++        +++++  +     +  +             + L          
Sbjct: 98  -------VLTTTFDDFHLVNVYTPNSQRGLARLDYRMQWDEAFLDYVKKLNRR------- 143

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNA 247
             P +  GD N     +   +      +                   I   ++       
Sbjct: 144 -KPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQERAGLDAVTEAGFIDSFRQFHDGPGH 202

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           +DYF + +  +  +        +             SDHCP+
Sbjct: 203 YSWWTYRSDARARNIGWRLDYFWVAKKFWDRVADARIRCEI-----------HGSDHCPV 251

Query: 299 SIDYD 303
            +   
Sbjct: 252 ELTLT 256


>gi|296271351|ref|YP_003653983.1| endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM
           43833]
 gi|296094138|gb|ADG90090.1| Endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM
           43833]
          Length = 378

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/290 (11%), Positives = 79/290 (27%), Gaps = 22/290 (7%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              +++ ++++N+     ++G  +      R       +    K    ++    EM    
Sbjct: 101 PAMERIDVLTYNVCAAGNRDGTCVDTLKPARRKVWAKTVAGLIKRRGIEMASFTEMCYAQ 160

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                     +   +         +              +      +     L  +    
Sbjct: 161 VSLLRRELPGYRFVWYGIDRPGGRRGPDRCRRLWGGLAGRAVPPDGKSFGMALAIRGRTI 220

Query: 139 RAGNRRAVELLV--EINGKKIW---VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
               RR +   +  +    +I    +L               T+  +     Q A+ + +
Sbjct: 221 GPPLRRRLRADLPPDRPDARIHPRGLLCARGVLGRRRAVGCVTHISATESPRQVAELVAE 280

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL-IRFPKEKDSRCNANKNLR 252
           +      +  P ++ GDFNRK      +  +   +   +   +    +   R       R
Sbjct: 281 Y-----AAGDPVILTGDFNRKPGDRELSCLYGMGLGEGEYTEVDAAPDGVPRRGGAPTTR 335

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               IDY    ++     + +    I    +        LSDH P++   
Sbjct: 336 GGRKIDYIFATED---DFLPDGAEVISVKPE--------LSDHRPLTGTL 374


>gi|300773665|ref|ZP_07083534.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|300759836|gb|EFK56663.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 348

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/349 (10%), Positives = 82/349 (23%), Gaps = 64/349 (18%)

Query: 1   MIRKYVLALVFFLVPC-----TASVAQKVRL---VSWNINTLSEQEGVSLWKN------- 45
           M + Y  +L    +       + +  +K ++     +N+  L + E  +L  +       
Sbjct: 2   MKKTYFRSLCILFIFVVQTHISVAQQKKYQVYAAAFYNLENLFDTEKDTLINDEEFTAEG 61

Query: 46  ----SVKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
               + ++       + +    L           V L E+ +   +  +          S
Sbjct: 62  GNRWTAEKYRRKQLNMAKVISRLGKKYCPAGPAFVGLCELENRKVLEDL---TQQPSLVS 118

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
               I H        +  A+       +V           D       R  + +  E+ G
Sbjct: 119 LGYGIVHYDSPDRRGVDVALLYNPSLFKVKDSKV-FAYKVDHLPEYRTRDILLVTGELAG 177

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212
           +++ VL  H  S             S  L    A  ++  +            VI GD N
Sbjct: 178 EEMHVLVNHWPSRYGG--------KSSELREHAASIVRSVVDSLYAQDSLAKVVIMGDLN 229

Query: 213 RKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
                             + +          +  +    +          D  ++ +   
Sbjct: 230 DDPVDKSVRIVLNAKKTQQEVAKGGLFNTMWQHYERGVGSLGYQGKWNLFDQIIISEPLL 289

Query: 268 KFLIQ-------------------ESFSEILYNEDDIKSRGKRLSDHCP 297
                                     +    +            SDH P
Sbjct: 290 GEDRSTLKFWKSEIYNPEFLITQEGRYKGYPFRTFSGNVFQNGYSDHFP 338


>gi|125624386|ref|YP_001032869.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|124493194|emb|CAL98159.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300071173|gb|ADJ60573.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 352

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 85/316 (26%), Gaps = 55/316 (17%)

Query: 21  AQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +  +++++NI               G  +   S     S      +  K  + D   +Q
Sbjct: 56  GKTYKMMTFNIGYGSYPPSFNFFMDGGDDVRAYSKSAVKSAIQEDIRLIKKENPDFGNIQ 115

Query: 73  EMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRDSNNDI---HTAIAVRKKNV 121
           E+      ++   +          +    +      +        I    + I    K  
Sbjct: 116 EIDWQGDRSQQVNEPQLVRAGLPDYSSVLTQNYDSAYLFYPVTKPIGKAKSGIMTYSKYE 175

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 Y L    +        RA  +    ++ + KK  + + HL +F           
Sbjct: 176 IENSTRYKLPIETNFNKFFDLDRAFSVSLLPIKNSDKKFVIFNTHLSAFITDQ------- 228

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----------KTI 228
               +  QQ   L D + +        +   D+N  +    + +  W          K +
Sbjct: 229 ---KIQKQQLLTLFDAMKKYVNKGDYVICGADYNHALAGKAHPELTWMKEFPTENLTKGM 285

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                               KN +N    ID F++  N     IQ               
Sbjct: 286 RVVAPTNAPTVRSLDFAYHQKNPKNTFGIIDGFIVSNNIKDLKIQ------------TID 333

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+ +D+ 
Sbjct: 334 NQFKSSDHQPVLMDFS 349


>gi|312219360|emb|CBX99304.1| similar to endonuclease/exonuclease/phosphatase family protein
           [Leptosphaeria maculans]
          Length = 614

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 90/335 (26%), Gaps = 64/335 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           ++     +   ++N+  L+       +             +  Y K+   DI+F+QE+  
Sbjct: 293 SSGKCNGITFGAYNVENLAPNSTHHPFLA---------EHIVNYMKS--PDIIFVQEVQD 341

Query: 77  YNA-----------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            N                   A          F     + +        +I TA   +  
Sbjct: 342 DNGPTNDAVVSANLTLSTLTAAIAAAGGPNYAFTDIAPVDDRDGGQPGGNIRTAYLYKPS 401

Query: 120 NVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK----- 156
            +R+                    +  P      + +   +R+ +    E+ G +     
Sbjct: 402 LIRLYKPNPGGALDANQVLDGPTLRFNPGSIDPTNEAWTASRKPLAAQWEVIGNQQGNQP 461

Query: 157 --IWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIA 208
              + +++H  S     SL     P           Q+Q   +++ +   K+     + A
Sbjct: 462 DVFFTVNVHFGSKGGSSSLHGDARPPVNGGVDDRLAQSQITANFVKEILTKDKNAHIITA 521

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GDFN               I     L    K  +          N   +D+  +     K
Sbjct: 522 GDFNEFAFVEPLEQYV--NISGLQDLDAVAKLPELERYTYLFDMNAQQLDHIFVSDAVAK 579

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +       + +       + SDH P     D
Sbjct: 580 ---GQDAQYEHIHVNTWPEDAAQASDHDPSVARLD 611


>gi|197104133|ref|YP_002129510.1| hypothetical protein PHZ_c0667 [Phenylobacterium zucineum HLK1]
 gi|196477553|gb|ACG77081.1| hypothetical protein PHZ_c0667 [Phenylobacterium zucineum HLK1]
          Length = 333

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 81/297 (27%), Gaps = 29/297 (9%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P      +++ ++++N+  L                      LR+  +    D+V +QE 
Sbjct: 23  PSQGPREREISVLTYNVRGLPWPVARGRGAALRAIGEE-LAALRRAGRE--PDLVLIQEG 79

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHS------------KRDSNNDIHTAIAVRKKNVR 122
                V  +   + +  +       +                         + V      
Sbjct: 80  F-RGEVEDLVRASGYAHWARGPGRGDRRAGGLPALPGLLRGEGWGTLAGGGLHVLSDLPI 138

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
              ++            A     +  +   +G ++ V++ HL +     + +     +  
Sbjct: 139 RDVRAAAYSACAGLDCLAAKGVMLVRVRLDDGTEVDVINTHLNARRASRAPKPRTLQA-- 196

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              +Q   L  +I        P V+ GDFN +     +   +     P   +  F     
Sbjct: 197 -HHRQTDELLAFIADHAAPDRPLVVGGDFNVR--NAPDRYKYRAEARPYVVVAEFCHRHA 253

Query: 243 SRC-NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHC 296
           ++C + +            +  Q+   F             + +   G+    SDH 
Sbjct: 254 AQCASPHAAQNQPW-----LKSQDLQAFASPAGIDLRPVGVETLFDGGETPSLSDHA 305


>gi|22213026|gb|AAH25571.1| Endonuclease/exonuclease/phosphatase family domain containing 1
           [Mus musculus]
          Length = 569

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 81/296 (27%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 FRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDKEALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDI------------HTAIAVRKK-NVRVLQQSYPL 130
             +    I  +  +         +               ++        NV +       
Sbjct: 312 CTELNQPILPNIRKWKGSRGCWRSIVAEKPSNQLQKGPCYSGFLWDTAANVELRDIPGRE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +  ++A          ++    + ++++ L +     +  ++ + S          
Sbjct: 372 SSPSNGHAKAVGPSPFLTRFKVGSNDLTLVNLQLTALALPGAENSSKNHSDGHR---LLN 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     VI GDF +  +    +      +         P    +  +    
Sbjct: 429 FALTLQETLKGEKDVVILGDFGQGPDSNDYD-----ILRREKFHHLVPAHTFTNISTRNP 483

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
             +K   D   + ++  K                 I          S+HCP+  + 
Sbjct: 484 QGSKSV-DNIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEL 538


>gi|325296913|ref|NP_001003774.2| deoxyribonuclease I-like 3 [Danio rerio]
          Length = 270

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 81/287 (28%), Gaps = 35/287 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82
           +++ S+N+    +         S     +    L +       DI+ + E+      A  
Sbjct: 1   MKVASFNVQKFGK---------SKLSDPAVLQTLIKIVSRY--DIIVILEVVDSKGRAMD 49

Query: 83  --VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +   N +         ++      N         R+  V +   SY     +     A
Sbjct: 50  NFLKELNKFDKKAHYTMELSTRLGRGNYKEQFMFLYREDVVEL-VGSYQYKDDQPGDEDA 108

Query: 141 GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             R    L  +      + + ++ +H K    +  ++  Y     +  +           
Sbjct: 109 FAREPYILRFKCPNAVLEDLVLMPVHTKPEDSVKEIDELYDVFQDVRKKW---------- 158

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   +I GDFN   +Y+ +       I  +        + +    +  N      I
Sbjct: 159 ---KTDNIMILGDFNADGSYVSDKKMKQIRIRSDPEFHWLISDDEDTTASTHNDNTYDRI 215

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302
              V   +    ++  S     +            ++SDH P+ ++ 
Sbjct: 216 --VVYGDDMMLAVVPGSAKPFNFQTAFSLTEEDALKVSDHYPVEVEL 260


>gi|323344994|ref|ZP_08085218.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oralis ATCC 33269]
 gi|323094264|gb|EFZ36841.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oralis ATCC 33269]
          Length = 348

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/352 (11%), Positives = 92/352 (26%), Gaps = 63/352 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------S 46
           M ++ ++ +   L+  + S  +K  +     +N   L +    +   +            
Sbjct: 1   MRKQLIIFVALLLITFSVSAQKKFSVYAVGFYNQENLFDTCHDAGKNDYEFLPSGSYHWD 60

Query: 47  VKRTTSDYTLLRQYAKNLDAD--------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             + +     + +   ++  D        I+ L E+ +   +  +  +       +    
Sbjct: 61  GLKYSHKLHNMARALADMATDKLPNIGCAIIGLSEVENAKVLDDLTAQPELK---ARGYK 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +      I  A+        V      P +   +  S   +R  + +   + G+ +
Sbjct: 118 YVHVEGPDRRGIDCALLYNPSLFAVRNVKLVPYVQRLEKDSAYKSRGFLTVSGTMAGEHV 177

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
             +  H  S           S    +  +Q + +KD +  K +      + GD N     
Sbjct: 178 AAIVCHWPSRFSG-------SFYREIAGEQVKAVKDSL-LKADPACKVFVMGDMNDDPVD 229

Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
              ++      +       +     +                    D  VM  N      
Sbjct: 230 RSMHEKLSAKAEINQVGVGDMYNPWYNVLVKKGTGTLMYNGAWNLFDQIVMTPNLLNKDG 289

Query: 272 QESFSEILY-----------------------NEDDIKSRGKRLSDHCPISI 300
            + FS + Y                                   SDH P+ +
Sbjct: 290 SKDFSTLKYWSCQIQRMPYLFQTEGKYKGSPKRTTAGGVWQDGYSDHLPVVV 341


>gi|39951489|ref|XP_363461.1| hypothetical protein MGG_01387 [Magnaporthe oryzae 70-15]
 gi|145020783|gb|EDK04912.1| hypothetical protein MGG_01387 [Magnaporthe oryzae 70-15]
          Length = 443

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/291 (9%), Positives = 85/291 (29%), Gaps = 30/291 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + +++ N+  L      +         + +   +         D+V LQE  +++A 
Sbjct: 27  SGSLNILTLNVAGLPPILNGNDVPGDKATNSRN---IGGKLSQYGYDLVHLQEDFNFHA- 82

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +    +       +                  +   +  + +          
Sbjct: 83  --------YIYETNKHPFRTATSGGVPFGSGLNSVSNYDWIDFERVKWNVCENASGADCL 134

Query: 141 GNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +    + + +  G  +   ++H  +                  +   + + D I ++ 
Sbjct: 135 TPKGFTFMRLRVAEGVYVDCYNLHADAGSL--------EADMKARNANLRQVSDAIKER- 185

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRN 253
                 ++ GD N +   + +    ++  +                 ++S C+      +
Sbjct: 186 SEGNAVLVFGDTNSRYTRIPDGITVFRLQNGMTDPWVELIRGGVEPTQESLCSNPSTTNS 245

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +D      +    L  + +     +   ++  G  LSDH PI++++D+
Sbjct: 246 CETVDKVFYRSSPTVSLKAKEW--SYASTKFLQDNGDLLSDHNPIAVNFDW 294


>gi|154507793|ref|ZP_02043435.1| hypothetical protein ACTODO_00275 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797427|gb|EDN79847.1| hypothetical protein ACTODO_00275 [Actinomyces odontolyticus ATCC
           17982]
          Length = 801

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/350 (13%), Positives = 89/350 (25%), Gaps = 73/350 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVS--LWKNSVKRTTS-------------------- 52
           P   +V    R+ ++N+       GV          RT +                    
Sbjct: 363 PGVPTVGGDTRVATFNVLNYFSDLGVDESGCSGYPDRTGAFVTAKKCKVRGAFSREAFAN 422

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNA----------VAKVFPKNTWCIFYSTERLINHS 102
               +      L AD+V L+E+ +  A          +A++           T   +   
Sbjct: 423 QEAKIVAAINALGADVVALEEIENPVAVGVGTDRDASLARLVEALNKDAGAGTWAYVPSP 482

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV------EINGKK 156
           +     +    +A   K    +    P L   D       R+ +                
Sbjct: 483 QAVPEAEDVIRVAFIYK-PATVAPVGPSLIHDDPAFTGLARQPLAQEFARVAGERSAPAS 541

Query: 157 IWVLDIHLKSFCFLDSLENTYS--------PSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             V+  H KS   +       +         + ++   QA  L  +  +  +   P ++ 
Sbjct: 542 FVVVANHFKSKGSVPEGAPAGNVDSGDGQGNANAIRVAQAGALASFAARFADK--PTLLV 599

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GDFN             K ++       + +   +   +         +D+   +  A  
Sbjct: 600 GDFNSYSQEDPI-----KALEAAG----WERVSGAGEASYVYAGRSGSLDHVFANAAAKP 650

Query: 269 FLIQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303
            L   +   I   E                       R SDH P  I   
Sbjct: 651 LLAGVTSWAINAQESIAFEYSRAGMNAHLAVEADNPYRSSDHNPEIIGLT 700


>gi|283769444|ref|ZP_06342342.1| exodeoxyribonuclease III [Bulleidia extructa W1219]
 gi|283103969|gb|EFC05354.1| exodeoxyribonuclease III [Bulleidia extructa W1219]
          Length = 251

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 83/309 (26%), Gaps = 86/309 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++ VSWN+N L                        ++ + +DAD+  LQE     + +  
Sbjct: 1   MKFVSWNVNGLRAVMKKGFK---------------EFFERVDADVFALQETKMQADQITS 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  + ++     +          +   V  K   +  Q                
Sbjct: 46  EMEFEGYYRYMNSAERKGY----------SGTMVYCKEEPISVQYDIEGDTSMEG----- 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL---LSQQAQWLKDWITQKK 199
                           V+ +   ++ F+ +         +      +    L+D + +  
Sbjct: 91  ---------------RVITLEYPNYYFVTAYVPNSKEGLARLGFRMEWEDRLRDHLNR-L 134

Query: 200 ESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           + + P +  GD N                   +          +  +  +  F       
Sbjct: 135 KEVKPVIYTGDLNVAHEEIDLKNPQSNHKNPGFSDEERQKMTELLADGYIDSFRYLYPKE 194

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDYF++ +N  + +      + +           + SDH
Sbjct: 195 VK-YSWWSYRAAARERNVGWRIDYFIVSENLKEKVKNALIDDEV-----------KGSDH 242

Query: 296 CPISIDYDF 304
           CPI ++ DF
Sbjct: 243 CPIELEMDF 251


>gi|291612503|ref|YP_003522660.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1]
 gi|291582615|gb|ADE10273.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1]
          Length = 288

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 89/331 (26%), Gaps = 97/331 (29%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           +R+++ N+N +                      L ++    DADI+ +QE+ +  A   A
Sbjct: 1   MRIITLNLNGIRSAYNKG---------------LLEWFSRQDADILCVQELKAQAADMTA 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +  ++       +S     +        RK +  ++    P   A+  +    
Sbjct: 46  DMLSPLGYHGYFHYAEKKGYSGVGIYSK-------RKPDSVIVGLDIPEFDAEGRY---- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-------- 193
                   +E     + V+ ++L S    +  +              + + +        
Sbjct: 95  --------IEAQFGNLSVVSLYLPSGSSGEERQAVKFKFMEAFMPHLRQMMENSKVPVVG 146

Query: 194 ------------------WITQKKESLVPFVIAGDFNRKINYLGNNDD------------ 223
                              + Q + S    ++ GD+N         +             
Sbjct: 147 ESRLLPQTAGSTSNVSQPHMVQLQRSGRDVIVCGDWNIAHTEKDLRNWRGNKKNSGFLPE 206

Query: 224 ---FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLI 271
              +   +      +   ++      A     N+           IDY +         +
Sbjct: 207 ERAWLTELLGEVGFVDVFRKLHPELEAYTWWSNRGQAWAKDVGWRIDYQIATPGMAAKAV 266

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                           + +R SDH P+ +DY
Sbjct: 267 STGI-----------YKEQRFSDHAPLMVDY 286


>gi|319409386|emb|CBI83030.1| exodeoxyribonuclease III [Bartonella schoenbuchensis R1]
          Length = 271

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 77/306 (25%), Gaps = 66/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ +WN+N                        + QY      DI+ LQE         +
Sbjct: 3   FRIATWNVN----------------SIRLRLAQVLQYLDLFAPDILCLQETKCP---DHL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  +                S    +  +AV  +   +  +       K  F +    
Sbjct: 44  FPREPFQAA------GYEHIALSGQKSYHGVAVVSRLPLLDVE-------KRFFCQKEEC 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--- 200
           R + ++V+  G+ I + + ++ +    D  + + +          + +      + +   
Sbjct: 91  RYLSVVVQPCGRAIRIHNFYVPAG--GDEPDVSVNEKFRHKLDFLEEMSSIRADQGDGLS 148

Query: 201 ------------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
                           +      N   +     +           +     +        
Sbjct: 149 SLLLGDLNIAPLEDDVWSHKKLLNVVSHTPVETERLQALCREGGWIDLMRIKFPVPAKLY 208

Query: 249 KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+     +   F+   S                + SDH P+
Sbjct: 209 TWWSYRARDFALSDRGRRLDHIWSSPDLAPFMDDLSI-------FRAARGEPQPSDHVPV 261

Query: 299 SIDYDF 304
              +DF
Sbjct: 262 QTVFDF 267


>gi|313887266|ref|ZP_07820957.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923185|gb|EFR34003.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 345

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/341 (11%), Positives = 85/341 (24%), Gaps = 55/341 (16%)

Query: 6   VLALVF-FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDY 54
           +L+L F  +    ++  Q+V +  +N+  L +                   +++R     
Sbjct: 4   LLSLSFGIIYAQQSTTPQRVTVAFYNLENLFDTIDQENNDEEFLPEGANRWTLERYQHKL 63

Query: 55  TLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             +      +  D   I+ + E+ +   +  +  + +          I H        I 
Sbjct: 64  RNMSHVISLIGGDGPAIIGVAEIENRGVLEDLIAEES---LRDKHYDIVHYDSPDRRGID 120

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
            AI  + +  +V       +   +       R  V     ++G+ + VL  H  S    +
Sbjct: 121 CAILYQPEVYKVFASGARAVEIPNEPWIK-TRDVVYASGLLDGEIVHVLVGHWPSRSGGE 179

Query: 172 SLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----- 225
           ++  +    +   +   A  L              ++ GDFN         D        
Sbjct: 180 AVSLHRRMAAAKTMRSVADSL-----YTLFPGSKVIMMGDFNDDPISPSVRDGLGVQNHP 234

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---------------- 269
               P D      +  +               D   ++                      
Sbjct: 235 DQTKPADYYTPMLQLYNKGMGTLAYRDVWNLFDIIAVNGELIGSNPTTWQLYRDPETTDM 294

Query: 270 ----------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                          +                 SDH P+ +
Sbjct: 295 AFIFKQPFMIQQSGQYKGYTLRTFVGGQWQGGYSDHFPVYV 335


>gi|218671527|ref|ZP_03521197.1| putative metal-dependent hydrolase protein [Rhizobium etli GR56]
          Length = 170

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 55/197 (27%), Gaps = 37/197 (18%)

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
                A+         ++ PL            R A+ + + +  +K+ V++ HL     
Sbjct: 8   EQYGDAIITALPTGAVKAGPLPSIG------EQRGALSVEILVGDRKLLVINTHLGLRG- 60

Query: 170 LDSLENTYSPSCSLLSQQAQWLKD--WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                           +Q   L +  W+       +P ++ GDFN   +         ++
Sbjct: 61  ------------RERIRQMTTLLNAGWLRGAANEPLPCILCGDFNAIPSSAT-YRLAARS 107

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +          K        +      + +D+  +  +            +         
Sbjct: 108 LKD---AQLAGKAAAKATFPSLYP--LMRLDHIFVTDDL----------VVKKATVLQNR 152

Query: 288 RGKRLSDHCPISIDYDF 304
             +  SDH P+  +  F
Sbjct: 153 LTRIASDHLPLFAEIGF 169


>gi|289662605|ref|ZP_06484186.1| hypothetical protein XcampvN_05822 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 255

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 86/295 (29%), Gaps = 60/295 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70
           AS ++ +R+++ NI   S     S +               +    + +       DIV 
Sbjct: 3   ASESRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGER--DIVG 60

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           LQE    +  +    +  +    +     +H   R       +A  +  K   V  Q + 
Sbjct: 61  LQEADPGSLRSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHA 120

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L G      R G R  +          + V   HL                 +    Q  
Sbjct: 121 LPG------RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLA 161

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247
           ++ + ++    +    ++ GDFN   +                 L R  + +   C  + 
Sbjct: 162 FIAELLSDHPNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCEVHT 206

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + R    ID+ ++  +                 +  ++     SDH  + +D 
Sbjct: 207 FPSWRPDRAIDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 247


>gi|120610799|ref|YP_970477.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1]
 gi|120589263|gb|ABM32703.1| Exodeoxyribonuclease III [Acidovorax citrulli AAC00-1]
          Length = 262

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 75/300 (25%), Gaps = 70/300 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                   +    L Q+ +    D+  LQE+   +     
Sbjct: 1   MKIATFNVN----------------SIRARLPALLQWLEESRPDVACLQELKCTDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +            +A+  +    ++    L G +         
Sbjct: 42  -------FPAGEIRAAGYGALWHGQKAWNGVAILARGANPIEVQRGLPGDEADSQSRYLE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV+ ++        V  ++L +       +  Y  +          L       ++   
Sbjct: 95  AAVDGVL--------VACLYLPNGNPAPGPKFDYKLA------WLDRLARRAGVLRDRPE 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN                         D ++ +  +                 
Sbjct: 141 PVVLAGDFNIIPTERDVYKPGAWVDDALFRSEVRDAFRALVDSGWTDALRAVHPDETVYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          ID+ +++  A   L            D       R SDH P   
Sbjct: 201 FWDYLRQRFQRNAGLRIDHLLLNPAAAHRLQDAGV-------DREVRGRPRPSDHAPAWA 253


>gi|74217725|dbj|BAE33589.1| unnamed protein product [Mus musculus]
          Length = 310

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 94/307 (30%), Gaps = 44/307 (14%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           +L+ F++    ++A  +RL S+N+ +            S K       ++ +  K    D
Sbjct: 12  SLLLFILALHDTLA--LRLCSFNVRSFGA---------SKKENHEAMDIIVKIIKRC--D 58

Query: 68  IVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           ++ L E+   +      + +    N+         + +   R++  + + A   ++K V 
Sbjct: 59  LILLMEIKDSSNNICPMLMEKLNGNSRRSTIYNYVISSRLGRNTYKEQY-AFVYKEKLVS 117

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           V +  Y     +D  +   +R    +        +    I         S          
Sbjct: 118 V-KTKYHYHDYQDGDTDVFSREPFVVWFHSPFTAVKDFVIVPLHTTPETS---------- 166

Query: 183 LLSQQAQWLKDWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                 + + + +    +         F+  GDFN   +Y+         +  +   +  
Sbjct: 167 -----VKEIDELVDVYTDVRSQWKTENFIFMGDFNAGCSYVPKKAWQNIRLRTDPKFVWL 221

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295
             +++              I   +  Q     ++  S     + +    S  + L  SDH
Sbjct: 222 IGDQEDTTVKKSTSCAYDRI--VLCGQEIVNSVVPRSSGVFDFQKAYDLSEEEALDVSDH 279

Query: 296 CPISIDY 302
            P+    
Sbjct: 280 FPVEFKL 286


>gi|50086482|ref|YP_047992.1| catabolite repression control protein [Acinetobacter sp. ADP1]
 gi|49532458|emb|CAG70170.1| catabolite repression control protein [Acinetobacter sp. ADP1]
          Length = 285

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  +AD++ +QE   ++     
Sbjct: 26  LRVVSINVNGLRSSVTKG---------------LLEWLEKSEADVICMQESRITHAQWTD 70

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +      Q        DS  R   
Sbjct: 71  KFKPEGWYTHLFPAERAGYA----------GTAIYSRIPFKSVQDGLGFELADSQGRF-- 118

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++   +  ++  ++L S    D        + +      +     + Q ++ 
Sbjct: 119 ---IAAEFDLGLNQPAYICSLYLPSGSSGD-------EAQARKDVFLEKYAQILKQWRDE 168

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N     +   +                +   I      +   +E      
Sbjct: 169 NKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAE 228

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +     +                R +  SDH P
Sbjct: 229 LYSWWSNRGQARAKNVGWRIDYHACSPDWKTRTVNAWV-----------YRDEWYSDHAP 277

Query: 298 ISIDY 302
           + IDY
Sbjct: 278 VIIDY 282


>gi|34580716|ref|ZP_00142196.1| exodeoxyribonuclease III [Rickettsia sibirica 246]
 gi|28262101|gb|EAA25605.1| exodeoxyribonuclease III [Rickettsia sibirica 246]
          Length = 271

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 80/306 (26%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+ A     DI+ LQE    +++   
Sbjct: 1   MKIVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVADSL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       S    +  +A+  K       S  L  +         R
Sbjct: 42  ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNDVFSLELYNSDK-------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +I     +V           D  +   +       +  + +++W+T  +    
Sbjct: 89  HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N   +                         +  +    +             
Sbjct: 142 KMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFIDSSRHFVSLDEKF 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L+         +           SDH P
Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALVS-------MHLLSEARDWSSPSDHVP 254

Query: 298 ISIDYD 303
             + ++
Sbjct: 255 YFVTFN 260


>gi|303241137|ref|ZP_07327646.1| exodeoxyribonuclease III Xth [Acetivibrio cellulolyticus CD2]
 gi|302591397|gb|EFL61136.1| exodeoxyribonuclease III Xth [Acetivibrio cellulolyticus CD2]
          Length = 251

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 81/304 (26%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N +    G                    + +  DADI  +QE          
Sbjct: 2   LKMISWNVNGIRAVMGKGF---------------TDFFQKEDADIFCIQETKVQEG-QIE 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P   +  +++      +          + +AV  K   +       +   D   R    
Sbjct: 46  IPFEGYYKYWNYAEKKGY----------SGVAVFTKIKPITVSYGIGIEEHDKEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +V+ ++  +     +  +             + L+ +         
Sbjct: 92  -----VITLEFDEYYVVTVYTPNSQRGLTRLHYRMKWEDDFLSYLKSLERY--------K 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           + +   N  +  F      R    
Sbjct: 139 PVIVCGDLNVAHKEIDLKNPQSNKKNAGFTEEERSKFDSYVNNGFIDTFRYFYPDRIGVY 198

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     L            D +       SDHCP+ 
Sbjct: 199 TWWSYMFNSRQNNAGWRIDYFIVSERIKDRLK-----------DALVYSEITGSDHCPVG 247

Query: 300 IDYD 303
           I  D
Sbjct: 248 ILLD 251


>gi|224113265|ref|XP_002332611.1| predicted protein [Populus trichocarpa]
 gi|222832812|gb|EEE71289.1| predicted protein [Populus trichocarpa]
          Length = 422

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 91/306 (29%), Gaps = 47/306 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +A+V    +++S+N+    E   +                L +  +    D++ LQE+
Sbjct: 145 TNSAAVLGSFKILSYNV-WFREDLEM----------HRRMKALGELIQLHSPDVICLQEV 193

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                +  ++       ++   +    S+  S+           K       + P + + 
Sbjct: 194 -----IPDIYDIFQRSSWWKAYQCSVSSEIASSRGYFC--MQLSKLPVKSFSTKPFMNS- 245

Query: 135 DSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                   R      +E+ GKK + V   HL+S C                  QA+   +
Sbjct: 246 -----IMGRELCIAELEVPGKKSLVVATSHLESPCPAPPKW--DQMFSKERVDQAKEAIN 298

Query: 194 WITQKKESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +          +  GD N      G     +      ++       +  +  S    + 
Sbjct: 299 LLK----KNSNVIFCGDMNWDDKLDGQFPFPDGWVDAWVELKPGDNGWTYDTKSNQMLSG 354

Query: 250 NLRNKIPIDYFVMDQ-----NAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCP 297
           N   +  +D F+        +    + +++   + Y ++    +  +        SDH  
Sbjct: 355 NRALQKRLDRFICSLCDFKISKIDMIGKDAIPGLSYMKEKKVRKEVKMLELPVLPSDHYG 414

Query: 298 ISIDYD 303
           + +   
Sbjct: 415 LLLTIS 420


>gi|169838781|ref|ZP_02871969.1| Endonuclease/exonuclease/phosphatase [candidate division TM7
           single-cell isolate TM7a]
          Length = 245

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 84/285 (29%), Gaps = 59/285 (20%)

Query: 29  WNINTLSE---QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-------SYN 78
           +NI   +     +     +  +  +      + ++      D+V L E+        S N
Sbjct: 4   YNIRYGTGKYLNQPFKHIRGYLGHSVKHIYRIGKFINRYKPDLVGLVEVDLGSFRMYSRN 63

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +         Y  +   +              A+  KN  + ++ + L        
Sbjct: 64  QATLLGRITRNNNVYQYKYEEDSQYMKFPMVRKQGNALLSKNPILREEFHYLDIGMKK-- 121

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                    L++E+  + + V  +HL                     +Q   L D +   
Sbjct: 122 ---------LIIEVETEDVIVFLVHLALGG-------------KTRQKQIVQLYDLVKNC 159

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           K+   P ++AGDFN               +  +D      ++         +   K  +D
Sbjct: 160 KK---PVIVAGDFNVFWGEEEIE----MFLQASDLKNINTRKDP----TFPSWNPKRELD 208

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +  +         S+  I            +LSDH PI ID+D
Sbjct: 209 FILCSKEIKV----NSYEVIQT----------QLSDHLPILIDFD 239


>gi|262280501|ref|ZP_06058285.1| catabolite repression control protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258279|gb|EEY77013.1| catabolite repression control protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 280

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD+V +QE   ++    +
Sbjct: 20  LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 64

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V  +        DS  R   
Sbjct: 65  KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSVKDGLGFELADSQGRF-- 112

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++     + +  ++L S    +        + +            + Q ++ 
Sbjct: 113 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 162

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD+N     +   +                +   I      +   +   +   
Sbjct: 163 NKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRIVRAEAE 222

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +                      + +  SDH P
Sbjct: 223 LYSWWSNRGQARAKNVGWRIDYQACSPDWKTRTTNAWV-----------FKDQWFSDHAP 271

Query: 298 ISIDY 302
           + IDY
Sbjct: 272 VIIDY 276


>gi|329955530|ref|ZP_08296438.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
 gi|328525933|gb|EGF52957.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
          Length = 335

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/346 (10%), Positives = 95/346 (27%), Gaps = 61/346 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKN-----------S 46
           M +  V    +F V    +   +     +  +N+  L +    +   +           S
Sbjct: 1   MRKLIVFFSFWFGVTIVTAQNTERKLYSIAFYNLENLFDTIHDAGKNDHEFLPDGSYRWS 60

Query: 47  VKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
           V++  +    L +   +L  D       ++ + E+ +  A+  +  +     +       
Sbjct: 61  VRKYEAKLHNLSKVLSSLSRDLVPEGPAVIGVAEVENRRALTDLVSRPAISNYKFVHYEG 120

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                     I  A+    +   V      L    +  +    R  + +   + G+++  
Sbjct: 121 P-----DRRGIDCALLYDPQQFTVTNSKLVLSTPFEGDTVHLTRGFLIVDGRMAGERVCF 175

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S           SP     ++Q + L D +  +++  +   + GD N       
Sbjct: 176 IVNHWPSR-------GAKSPVRVHAAKQVRALTDSL-LREDKKLKLFVMGDMNDDPMDES 227

Query: 220 N-----------------NDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIP 256
                              + +W+ ++         + K +              +  + 
Sbjct: 228 MQTLGARKYVSGMKASQFYNPWWEILEDKGVGTLLYRGKWNLFDQIVLSRPVVKAKKGLR 287

Query: 257 IDY--FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            D+    +     +      +          +      SDH P  +
Sbjct: 288 YDHSEVFIRDYLIQ--QDGKYKGAPLRTHGGRVWLNGYSDHLPTIV 331


>gi|307129015|ref|YP_003881031.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya
           dadantii 3937]
 gi|306526544|gb|ADM96474.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya
           dadantii 3937]
          Length = 380

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 75/267 (28%), Gaps = 32/267 (11%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             K L+ADI+   E+ +   +     +      ++   +I+         I  A   R +
Sbjct: 121 VIKALNADILCAVEVENMAVLRDFNQQILADRAFAQYVMIDSPN--DPRGIDVACLTRHR 178

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYS 178
             ++      +    +SF    +R  +E+ +++   + + VL  H KS    +  E   +
Sbjct: 179 ITQL---RTHIFDVSESFKPLFSRDCLEVTIDVGLPQPVHVLCNHFKSQNGRNDDERERA 235

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                     + + + +          V+ GD N  +    ++          D      
Sbjct: 236 AKRRRAQA--ERVAEIVRGYNLQQEYVVVMGDLNEDVANPWHS--LAPLFSVPDLHPAID 291

Query: 239 KEKDSRCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEI-------------- 278
                                   +DY  +    ++  +                     
Sbjct: 292 PSLPETARYTYYFSGGKAGERLNQLDYIFISTPLHQAKVTCGIERRGIYNIDKITAKEGA 351

Query: 279 --LYNEDDIKSRGKRLSDHCPISIDYD 303
             +     + S     SDH  + ++ D
Sbjct: 352 EPVTPFPTVTSWDTAASDHAAVWVELD 378


>gi|294664292|ref|ZP_06729661.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605941|gb|EFF49223.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 330

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 75/298 (25%), Gaps = 74/298 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ ++N+N ++                     L ++ +    DIV LQE+ S  +     
Sbjct: 7   KIATFNVNGIAS----------------RLPHLLEWLQREQPDIVGLQELKSTQSA---- 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGN 142
                       R   +            +A+  R      +++  P             
Sbjct: 47  ------FPKQAIRDAGYGVIWHGEKSWNGVALLARGTEPVEIRRGLPW----------DP 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +E     + V  ++L +       +  Y  +        + L        +  
Sbjct: 91  RDTQSRYLEAAIHGVVVACLYLPNGNPQPGPKFDYKLA------WFERLIRHAKTLVDLP 144

Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247
            P  + GDFN         D                 ++T+         P         
Sbjct: 145 HPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQTLLAQGWTDSLPAIHGQTPIY 204

Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +          ID+ ++++     L            D      ++ SDH P
Sbjct: 205 TFWDYFRQHFARDRGLRIDHLLLNRTLGPGLQDAGV-------DKWVRALEKASDHAP 255


>gi|293188973|ref|ZP_06607706.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309]
 gi|292822075|gb|EFF81001.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309]
          Length = 271

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/309 (10%), Positives = 78/309 (25%), Gaps = 67/309 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R  +WN+N                   +    +  + +    D++ +QE+         
Sbjct: 1   MRFATWNVN----------------SIRTRVDRVIAFLERSGTDVLAMQEIKCRPD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +AV  +   +  Q +               
Sbjct: 41  ------QFPTEAFEEAGYHVAIHGLNQWNGVAVASRLPILDVQDHFPTQPAFGEPPVVEA 94

Query: 144 RAVELLVEINGK---------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           RA+ + ++              + +  +++ +   L      Y      L+  A+  + W
Sbjct: 95  RALGVTIDTTNTLPSEDRQASSMTIWSLYVPNGRELTHAHYAYK--LEWLANLAEQGRGW 152

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFW-----------KTIDPNDSLIRFPKEKDS 243
           +    +      + GD+N         D              +      +   + +    
Sbjct: 153 L---TDPSALIALVGDWNVAPLDEDVWDMSAFEGATHVSAPEREAFAAFAADGWVEVTRE 209

Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           R                   + ID+          +            D  + +GK  SD
Sbjct: 210 RVTNYTYWDYQKLRFPKNEGMRIDFAYCSPALAARVSGAQI-------DRDERKGKGASD 262

Query: 295 HCPISIDYD 303
           H P+ +D D
Sbjct: 263 HVPVIVDVD 271


>gi|256545331|ref|ZP_05472695.1| exodeoxyribonuclease III [Anaerococcus vaginalis ATCC 51170]
 gi|256399012|gb|EEU12625.1| exodeoxyribonuclease III [Anaerococcus vaginalis ATCC 51170]
          Length = 275

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 87/305 (28%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++L+        +  + R       + +   + DAD++ LQE          
Sbjct: 1   MKFISWNIDSLNAALTSDSNRAVMSRD------VLKTIISEDADVICLQETKLPRTGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +     ++ +      S ++     +       K     + ++P+L A D+  +    
Sbjct: 55  KHQKILEEYFPSYDYAWVSSQEPARKSYAGCLTLYKKNLQTKITFPVLDAPDTMDQE--- 111

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K ++  ++  +     +            +   + L        +   
Sbjct: 112 ---ARIITLEFEKFYLTQVYTPNAGNGLNRLGLRQIWDEKFANYLENL--------DKNK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GDFN                         + +  +     +  F           
Sbjct: 161 AVIACGDFNVAHKEIDLKHPENNHESAGFTDEERNGFTNLLNKGFVDTFRYIHGDVEGKY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++       + + +  +    +           DH PI
Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFIVSDRIKDKIKESNMIDSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            +  D
Sbjct: 270 YLSID 274


>gi|6735373|emb|CAB68194.1| putative protein [Arabidopsis thaliana]
          Length = 597

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 87/344 (25%), Gaps = 59/344 (17%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                   ++S+NI  +T +  +  S         T     L +      ADIV LQE+ 
Sbjct: 242 PLSMGTFTVLSYNILSDTYASSDIYSYCPTWALAWTYRRQNLLREIVKYRADIVCLQEVQ 301

Query: 76  SYNAVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           + +      P+   + +   +  +         +  D       R +   V         
Sbjct: 302 NDHFEEFFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHVEFNKAAQSL 361

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY-----------SPSC 181
            +     +  + A+  LV+ N   I VL+    S    +  +                  
Sbjct: 362 TEAIIPVSQKKNALNRLVKDNVALIVVLEAKFGSQAADNPGKRQLLCVANTHVNVPHELK 421

Query: 182 SLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNN------------DDFWKTI 228
            +   Q   L   + +    + +P ++ GDFN       +             D     +
Sbjct: 422 DVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTVPASAPHTLLAVGKVDPLHPDLMVDPL 481

Query: 229 DPNDSLIRFPKEKD-----------------------------SRCNANKNLRNKIPIDY 259
                  +   +                                    N        +DY
Sbjct: 482 GILRPHSKLTHQLPLVSAYSQFAKMGGNVITEQQRRRLDPASSEPLFTNCTRDFIGTLDY 541

Query: 260 FVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +      + E   E    +D      +  SDH  +  ++
Sbjct: 542 IFYTADTLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 585


>gi|26990757|ref|NP_746182.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida KT2440]
 gi|148547022|ref|YP_001267124.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida F1]
 gi|24985756|gb|AAN69646.1|AE016599_1 conserved hypothetical protein [Pseudomonas putida KT2440]
 gi|148511080|gb|ABQ77940.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida F1]
          Length = 264

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 86/296 (29%), Gaps = 50/296 (16%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F     A   +++R+++ N +                        LR+  ++  ADIVFL
Sbjct: 10  FASVSQAPAVKRLRVLTVNTHKGFTAFNRRF----------ILPELREAVRSTQADIVFL 59

Query: 72  QEM----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQ 125
           QE+      + A    +P+ +   F +     +  + +     D H   A+  K   +  
Sbjct: 60  QEVLGSHDRHAARYPGWPQTSQYEFLADSMWSDFAYGRNAVYPDGHHGNALLSKYPIIEH 119

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           ++  +            R  +  ++E+ G+          S       +        L  
Sbjct: 120 RNLDVSITG-----PERRGLLHCVLEVPGQGQVHAVCVHLSLLESHRQKQLQLLRKLL-- 172

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                          +  P +IAGDFN   ++        + +        F +      
Sbjct: 173 -----------DALPANAPVIIAGDFNDWKSHGNRTLGLQRDLHE-----AFERHHGHLA 216

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                    + +D   +               + +           LSDH P++++
Sbjct: 217 RTYPARLPLLRLDRIYLRNA-----ESHGPRILGHK------PWSHLSDHLPLAVE 261


>gi|332829539|gb|EGK02188.1| exodeoxyribonuclease III [Dysgonomonas gadei ATCC BAA-286]
          Length = 254

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 86/306 (28%), Gaps = 77/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                      L ++ +    DI+ LQE+ +      V
Sbjct: 1   MKIISYNVNGIRAAVNKG---------------LYEWMEKESPDILCLQEIKAMEEQIDV 45

Query: 84  F--PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +  ++ +     +          + + +  K      +S   +   D   R  
Sbjct: 46  LTIQSLGYHYYFHSAEKKGY----------SGVGILTKKKPDFVKSGMDMPVYDREGR-- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++  +   + V+ +++ S    D  ++       +  +       +I + ++ 
Sbjct: 94  -------VLRADYGDMTVICVYIPSGTMGDIRQD-------VKMKFLADFTHFINELRKE 139

Query: 202 LVPFVIAGDFNRKIN----YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA---------- 247
               +I GD+N                     P +             +           
Sbjct: 140 RPQILICGDYNICHKPIDISHPERHTKDSGFLPEERQWFDEYIATGLIDTFRVYDESPDK 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY ++ + A   L   +                  SDHCPI
Sbjct: 200 YSWWSYRAGARGKNLGWRIDYHIISEEARPRLNGAAIL-----------SDIDFSDHCPI 248

Query: 299 SIDYDF 304
            ++ DF
Sbjct: 249 VVEMDF 254


>gi|227499267|ref|ZP_03929379.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098]
 gi|227218676|gb|EEI83907.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098]
          Length = 273

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 85/304 (27%), Gaps = 56/304 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++L+        +  + R       +    KN DADI+ LQE          
Sbjct: 1   MKFISWNIDSLNAALTSDSARAKLSRD------VLDTIKNEDADIIALQETKLPATGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K     F+        S RDS    +       K    +++S+P +GA D+    G  
Sbjct: 55  KHKEKLFEFFPDYDYFWVSSRDSARKSYAGTMTLYKKGLKVKESFPEIGAPDTMDLEGRI 114

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +EL         + + ++  +     +            +   + L            
Sbjct: 115 LTLELD------DYYFVQVYTPNAGGELNRLPLREIWDLKFADYLEELDKI--------K 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                           +  +        F         A 
Sbjct: 161 PVIATGDFNVAHEEIDLAHPENNHMSAGFTDEERRGFTNLLNRGFTDSFRYLNKDLEGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++       +   +  +    +           DH PI
Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFLVSDRLIDKVKDSTMIDSGQRQ-----------DHTPI 269

Query: 299 SIDY 302
            ++ 
Sbjct: 270 MLEI 273


>gi|229587031|ref|YP_002845532.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5]
 gi|228022081|gb|ACP53789.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5]
          Length = 260

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +   LLR +    + DI+ LQE+    A    
Sbjct: 1   MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    +++     R
Sbjct: 41  ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + +      ++ ++  +  F+ S +     +            ++++ KK    
Sbjct: 91  F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN     +                      +TI  +     +     S+    
Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLTETTCFTEVEQKKLRTILNSGFEDLYRLMHPSKQE-F 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L            D      ++ SDH P+ 
Sbjct: 203 SWWDYRAGCFEQNKGMRIDMVLGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255

Query: 300 IDY 302
             +
Sbjct: 256 ASF 258


>gi|190348984|gb|EDK41547.2| hypothetical protein PGUG_05645 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 308

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 91/313 (29%), Gaps = 31/313 (9%)

Query: 3   RKYVLALVFFLVPCTASVA------------QKVRLVSWNINTLSEQEGVSLWKNSVKRT 50
            K+  A +  LV   A+                 R+ S N+   +E+      +   +R 
Sbjct: 1   MKFSFAQILLLVSAVAAQPVQWSDLETRDTDLAFRIYSNNVREYTEK-RFPDERPWDERK 59

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNND 109
                 L     +    +V LQE+     V  +   N               +       
Sbjct: 60  YGVIEALNSRIHDF-PTLVGLQELKHNQLVDVLAGLNGQNQTEFPWAHYGVGRDDGVEKG 118

Query: 110 IHTAIAVRKKNVRVLQQSY----PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
            ++AI        +L  +Y    P          AG+RR V +    N +    ++    
Sbjct: 119 EYSAILYNTLEWDLLNGTYKWLSPTPDVPSYGWDAGSRRIVTMTTFRNKQTGTKVNYFNT 178

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                       + S     +  + +  W+ Q   +  P  ++GDFN   + +       
Sbjct: 179 HL---------DNKSEQSRQESTKLIVGWL-QSIPNDYPQFLSGDFNSIASDIAYETVAD 228

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
              D N          ++     +   ++  ID+     N+ K   +     + Y     
Sbjct: 229 YMADTNVIANIHETGNETTYTGFEYGDHQSVIDFIWAPSNSNKP--KSGVEVVGYEVLSN 286

Query: 286 KSRGKRLSDHCPI 298
                R SDH P+
Sbjct: 287 NYSDFRFSDHRPV 299


>gi|149916430|ref|ZP_01904949.1| prephenate dehydratase [Roseobacter sp. AzwK-3b]
 gi|149809700|gb|EDM69554.1| prephenate dehydratase [Roseobacter sp. AzwK-3b]
          Length = 305

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 91/309 (29%), Gaps = 40/309 (12%)

Query: 24  VRLVSWNINTL--------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ ++N+ +L           +  +  +        D  L  Q  ++LDAD++ LQE+ 
Sbjct: 1   MRIATFNVQSLRLRGDHLSGAHDDDTPERADPSLDHRDRLLTAQVIRDLDADVLALQEVF 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              A+      + + I        +      N+     IA+  +       S+  L   D
Sbjct: 61  DSAALDHF--HDHYLIPAGMPPYPHRICLPGNDGRGLDIALLSRMTPGDVVSHATLRPAD 118

Query: 136 SFSRAGNRRAVE--------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                  R   E        L VE+ G  ++++     +     +       + +L +  
Sbjct: 119 LGLAVPPRLRAETPIFRRDCLRVELAGLTLFLVHFKAPTPDPDAARPVRALEAAALRALI 178

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                D       +   ++I GD N   +           + P  S+    +  +    +
Sbjct: 179 EARFDD------PARAMWLILGDLNDPWDAKDP--PATAPVLPPFSVNLMDRLPEDARWS 230

Query: 248 NK--NLRNKIPIDYFVMDQNAYKF------------LIQESFSEILYNEDDIKSRGKRLS 293
                       D  +      +             +  E+      +  D+       S
Sbjct: 231 YHDAWSDRYGRPDQILASPALARACPDAMPETLRHGMALEAARNDGPHLPDVGRHRPHAS 290

Query: 294 DHCPISIDY 302
           DH  + I+ 
Sbjct: 291 DHAALMIEI 299


>gi|328719125|ref|XP_001944002.2| PREDICTED: putative neutral sphingomyelinase-like [Acyrthosiphon
           pisum]
          Length = 380

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 86/295 (29%), Gaps = 42/295 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+ + + NI  L         K + K   +    L     N   D+V LQE         
Sbjct: 2   KLSIFTLNIWGL---------KLTSKDRNARVRALADSLTNNGYDVVCLQE--------- 43

Query: 83  VFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDS 136
           ++ ++ +    ++   +  +     +  + + + +  +   +    +  +          
Sbjct: 44  LWCEDDYKHLKASCDNVFKYIHYFHSGMLGSGMCIMSRYPIIDHLYHSFILNGYLHMFWH 103

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               G +      + + G  + V   HL +     + + T          QA    + I 
Sbjct: 104 GDWFGGKGIGLCRINVEGFIVDVYTTHLHACYNASNDKYTN-----HRIIQAFETANLIR 158

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254
                    V+AGD N   N +         +  N          +S      +  N   
Sbjct: 159 VTSSGSDLAVLAGDLNSNPNDICYK---LICLGANMIDSYSSCLNNSIEYTYSHPENSYK 215

Query: 255 ------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   IDY +   N    ++ +     L     +  +    SDH PI   ++
Sbjct: 216 DANEINDRIDYILYKSNEKNLVVVKEHRHSL--PHRVPGQDFSYSDHEPIEAVFE 268


>gi|255531289|ref|YP_003091661.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255344273|gb|ACU03599.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 278

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 92/313 (29%), Gaps = 50/313 (15%)

Query: 1   MIR-KYVLALVFFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           M + K +  L+  ++ C+        K+R++S+NI            +     TT    +
Sbjct: 1   MKKLKTIFLLLALIMTCSGLQVFAQHKLRVISYNI-----------LEGMKNDTTKGKQV 49

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
              + K+   DI+ LQE   +  ++       +           H            + +
Sbjct: 50  FVNWVKSYAPDILALQECNKFTQLSLEEMAARY----------GHPYAILVKTTGYPVGI 99

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K   V  Q           +       +   ++     +  L+ H       +  E  
Sbjct: 100 TSKYPIVDVQKI---------TDNMTHGFIVCKIKDLNVIVLHLNPHKYRKRREEIGEIL 150

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + + + + ++   + D+              GD  + +        +   +    SL  
Sbjct: 151 GTMAVAPVRKRWMIMGDF-NSFSPLDKDNYQDGDALKSLQEAAKKYSYHDNLVDGKSLDF 209

Query: 237 FPKEKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
             +++          +        K  IDY  + ++  K +    F    +         
Sbjct: 210 QVQQQILDFGLKDAGKIVEPGGIPKRRIDYIYVSKDLIKKVTTAHFIRDDFT-------- 261

Query: 290 KRLSDHCPISIDY 302
              SDH P+ +++
Sbjct: 262 AGYSDHKPVIMEF 274


>gi|241205438|ref|YP_002976534.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859328|gb|ACS56995.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 369

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/366 (12%), Positives = 102/366 (27%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YTLL--RQYAKNLD----- 65
            +RL ++N+  L  +   + ++N +++              Y  L   +     D     
Sbjct: 2   SLRLATFNVENLLTRFDFTGFRNQLRQDRVIKLFQVSSEGVYQQLEQARVIAATDDTRQM 61

Query: 66  ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                    ADI+ LQE+ +  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  SALAIADADADILCLQEIDNMAALQAFEYGYLFRMVGNGYRQKYLVEGNDSRGIDVAVLM 121

Query: 117 RK------KNVRVLQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKI 157
           R+      K      +S+ +   +D                +   R  +EL + I G+  
Sbjct: 122 REETRDGQKIELRDIRSHAMTTYRDLDLFDEELALTNRIDDKIFKRDCLELDLLIGGRPF 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFNR 213
            +  +H KS        +    +  +   +A+ ++  I  +    +     F I GD N 
Sbjct: 182 SLYVVHFKSMGNPRDGLDGRQSTMPIRRAEARAVRGIIEDRFGAEQAGTKSFAICGDMND 241

Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255
                             +                +     + +        + R     
Sbjct: 242 YQERVDVIGRRGTGYRFEHQNETASALDVFSSDGFAENVVRRREPLDRWTLYHARGPQEQ 301

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCP 297
               +DY  +               I               +           + SDHCP
Sbjct: 302 WLCQLDYLWLSPALAAHNAGCLPEIIRSGQPYRTVFPPGQEVERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 VVMTLD 367


>gi|118602958|ref|YP_904173.1| exodeoxyribonuclease III [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567897|gb|ABL02702.1| exodeoxyribonuclease III [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 256

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 76/304 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83
           R+++ N+N +   E    +                + K  +AD++ LQE     N + + 
Sbjct: 3   RIITANVNGIRAAEQKGFF---------------DWIKIQNADVICLQETKAQENQLDER 47

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  +Y + +   +S                     + +  P             R
Sbjct: 48  FYPKEYHCYYQSAKKKGYSGTAIFTKQ---------VPIQVIKKSPW-----ENINFEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  + + + V+ I++ S       ++      +           ++ + K S  
Sbjct: 94  F-----IRADFEDLSVISIYIHSGSVKQKRQDLKMAFLTERFM------PYLQEIKISGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID----PNDSLIRFPKEKDSRC-----------NAN 248
             +I GD N         +      +    P +         +                 
Sbjct: 143 KVIICGDMNIVHQERDIKNWKANQKNSGCLPKERAWLDELFFEVGFIDSFREVNQEERQY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++  N    +   S             + +R SDH P+ 
Sbjct: 203 TWWSNRGQAWANNVGWRIDYQILTPNLKDTIKSVSI-----------YKDERFSDHAPLI 251

Query: 300 IDYD 303
           I+Y+
Sbjct: 252 INYN 255


>gi|311898258|dbj|BAJ30666.1| hypothetical protein KSE_48880 [Kitasatospora setae KM-6054]
          Length = 302

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/332 (11%), Positives = 83/332 (25%), Gaps = 84/332 (25%)

Query: 23  KVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +R+ ++N+        +G      +          L     +LDAD++ LQE+  Y   
Sbjct: 3   TLRIATYNLLHGQPLAPDGSPAPFPAEPGAP-----LADAVASLDADVLALQEVDRYQER 57

Query: 81  A----------KVFPKNTWCIFYSTERLI------------------NHSKRDSNNDIHT 112
           +          K      W    +                              ++    
Sbjct: 58  SGRTDQAAVAAKAMGAADWRFAAALHGTPAPGAGWLADPARPGLAVYGPGDLADDSRPSY 117

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVL 160
             A+  +   +  ++     A                     R A+  ++   G +  V+
Sbjct: 118 GTALLTRLPVLHWRARRFAPAPFGLPLRVAGRRGLTPVPDEPRAALAAVLAGPGGEFTVV 177

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------- 212
             HL      +               Q   ++ WI        P+++ GDFN        
Sbjct: 178 AAHLSFVPGWNVG-------------QLAAIRRWIADLP---QPYLVLGDFNLIGAVPRT 221

Query: 213 -RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                +        + +              +R     + R  +  D+ +          
Sbjct: 222 VLGSAHAIQRTARRERVRTARRTRLQGWYDLARTPTYPSHRPTVQFDHIL---------- 271

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        + +    +SDH P+ +D +
Sbjct: 272 --GIGVPRSTVGSVAAPRTPVSDHRPLVVDIE 301


>gi|224074261|ref|XP_002304326.1| predicted protein [Populus trichocarpa]
 gi|222841758|gb|EEE79305.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/338 (11%), Positives = 86/338 (25%), Gaps = 68/338 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78
              +++VS+N+N L              +  S +  L       DADI+  QE  +    
Sbjct: 2   GNPIKIVSYNVNGLR-------------QRVSQFGSLSNLLNTFDADIICFQETKLRRQE 48

Query: 79  AVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + +   + +  F+S  R  +  +   S       +     +  V        G     
Sbjct: 49  LTSDLVIADGYESFFSCTRTKDKGRTGYSGVATFCRVKSAFSSTEVALPVAAEEGFTGFI 108

Query: 138 SRAGNRRAVE-------LLVEINGKKIWVLDIHLKSFC-FLDSLENTYSPSCSLLSQQAQ 189
            R      +E       + V+  G+ +     H   F  +     +  +       +  +
Sbjct: 109 DRCKRNEGLEEFEKDELVKVDSEGRCVVTDHNHFVLFNLYGPRAAHDDTERIEFKMKFFK 168

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTI-------DP 230
            L+              + GD N     +                 F   +         
Sbjct: 169 ILQKRWENLLHEGRRVFVVGDLNIAPTAMDRCDADSDFEKNEFRRWFRSILMMSGGLFVD 228

Query: 231 NDSLIRFPKEKDSRCNANKN----LRNKIPIDYF-----------------VMDQNAYKF 269
                   + +   C ++            ID+                   +  +  + 
Sbjct: 229 VFRAKHPDRREAYTCWSSSTGAELFNFGSRIDHILCAGPCLHQEHDLQGHNFLSCHVKEC 288

Query: 270 LIQESFSEILYNEDDIKSRGKRL----SDHCPISIDYD 303
            I   +      +      G+ +    SDH P+ +  +
Sbjct: 289 DILTQYKRWKPGDSTRWKGGRGIKLEGSDHAPVYMSLE 326


>gi|167523152|ref|XP_001745913.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775714|gb|EDQ89337.1| predicted protein [Monosiga brevicollis MX1]
          Length = 585

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/321 (12%), Positives = 83/321 (25%), Gaps = 71/321 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + ++N+  L                 + +T + +   N+ AD++ LQE+  +   + 
Sbjct: 100 DLTVATYNLFGLR------------LAWETRWTGICKILGNVQADVLALQEVMKHEPTST 147

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   + Y         + D        +A+  +    + Q+ PL     S   A  
Sbjct: 148 QAHLLAQELGYEYVYYARAHEADPKEGGEEGLAIVSRFPAAVVQTVPLTPMPGSV-DANA 206

Query: 143 RRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R  +    +    + G+ + VL  H                  +     A+ L  ++   
Sbjct: 207 RVFLHARFDTIPALAGESLHVLANHWTY-------------DATAQCHAARELLAYLDAL 253

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTI----------------------------DP 230
             +    V+ GD N  +N     D     +                             P
Sbjct: 254 PAAD-HVVLLGDLNIYVNSEWPLDWLTNRVPAPLREHTVNRCAEAMRQYQAGQSDSARRP 312

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPI---------DYFVMDQNAYKFLIQESFSEILYN 281
               +              N                D  ++   A   L++         
Sbjct: 313 AFRDVWHTSFAWDPGWTFTNFHYTNRTNLYERATRPDRILLRSEA---LVERDVYLFGDA 369

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
            D +       SDH  ++  +
Sbjct: 370 LDGLVQPHLYASDHRGVATTF 390


>gi|325954749|ref|YP_004238409.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
 gi|323437367|gb|ADX67831.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
          Length = 325

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 94/324 (29%), Gaps = 49/324 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNS----------VKRTTSDYTLLRQYAKNLD------ 65
           ++  +  +N+     ++  +  + S            R       +     +L       
Sbjct: 2   KQFTIAFYNVENFYARQLHTTDEESFIVGNKQKWNTSRYAKKLDQVCTTLHHLGRQETGS 61

Query: 66  -ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRV 123
               + L E+ +   +  +         +S              +I+ A+  +K     +
Sbjct: 62  SPTFIGLAEVENALVLEDIVSHPQ---LFSDGYDYIFYDSLDERNINVALLYKKDETTIL 118

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
             +   ++       R+  R  + +  +   + + +  +HL S       ++  S    +
Sbjct: 119 DSKPIRVVFRNTLGIRSYTRDVLWVKAKHCDEILHLYVLHLPSRRGGLLNQHKRSNILQV 178

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFP 238
           L  +   L       KE     V+ GDFN   N     +        + +  ND    F 
Sbjct: 179 LKNELDILYA-----KEHEPNIVMMGDFNDTPNNSQLINILSTKANLQDVRSNDLFNPFV 233

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----------------LIQESFSEILYNE 282
           K  +         + ++  D  +  +N  K                  I  + +     +
Sbjct: 234 KMMNYDTGTIVYKKQRLIFDQMLFSKNFIKKDSFFHWKKSQIFNPNKFIFNNINTSTQPQ 293

Query: 283 DDIKSRGK--RLSDHCPISIDYDF 304
           +  + +      SDH PI    ++
Sbjct: 294 NTFRGKNYFGGPSDHFPIISIINY 317


>gi|29830170|ref|NP_824804.1| exodeoxyribonuclease [Streptomyces avermitilis MA-4680]
 gi|29607280|dbj|BAC71339.1| putative exodeoxyribonuclease [Streptomyces avermitilis MA-4680]
          Length = 287

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 79/312 (25%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78
           A  + + S N+N L                        ++     AD++ LQE+      
Sbjct: 19  AGVLTVTSVNVNGLRAAAKKGF---------------VEWLAETSADVLCLQEVRAEPDQ 63

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A V   + W + ++       +                  V +  +  P        S
Sbjct: 64  LPAGVRAPDGWHVVHAPAAAKGRAG-----------------VSLYTRREPDRVRVGFGS 106

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +     +  ++ G  + V  ++L S       ++             + L++     
Sbjct: 107 AEFDGGGRYVEADLPG--VTVASLYLPSGEVGTERQDEKYRFMGEFLTHLKDLRERA--- 161

Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTI--DPNDSLIRFPKE 240
                  ++ GD+N                         +   + +  +    +      
Sbjct: 162 AADGREVLVCGDWNIAHQEADLKNWRGNRKNAGFLPEEREWLGRVLSPEDGGYVDVMRAL 221

Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                        +           IDY V         ++          +   +  +R
Sbjct: 222 HPDVEGPYSWWSYRGRAFDNDSGWRIDYEVATPGLAAKAVKGFV-------ERAATHEER 274

Query: 292 LSDHCPISIDYD 303
            SDH P+++ YD
Sbjct: 275 WSDHAPVTVVYD 286


>gi|46135919|ref|XP_389651.1| hypothetical protein FG09475.1 [Gibberella zeae PH-1]
          Length = 602

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/330 (11%), Positives = 93/330 (28%), Gaps = 64/330 (19%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFL 71
           +   +    + + +  +N   L+ +                   + Q  + L   D++FL
Sbjct: 284 VSFTSKGSCKGITVADYNTENLNPESAHLPLV------------VGQIVEKLRTPDLIFL 331

Query: 72  QEMGSYNA------------VAKVFPKNTW-----CIFYSTERLINHSKRDSNNDIHTAI 114
           QE+   +             +A +             +       N        +I  A 
Sbjct: 332 QEVQDNSGAANDGVVSANKTLAALADGIEAASGVVYEWAEVVPDNNVDGGQPGGNIRQAY 391

Query: 115 AVRKKNVRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELL---VEIN 153
             R   V++++                  +  P      +     +R+ +      V+  
Sbjct: 392 LYRPDVVQLVKPNEGSASDVNAVLDGPTLKFNPGRIDPANSVWDNSRKPLAAEWKPVKGT 451

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESL--VPFVI 207
            K  + +++H  S     S+               ++Q++   D++ Q  +       ++
Sbjct: 452 KKSFFTVNVHFGSKGGSSSIHGDARTPVNKGVEKRTKQSEVTADFVAQILKKDKKAHVIV 511

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
           AGDFN   +      D +        +    K   +         N   +D+  + +   
Sbjct: 512 AGDFNEFADVEPI--DTFVKTSGLVDIDDAAKIPMTERYTYLFDSNCQALDHMFISKELR 569

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           K            + +  +     +SDH P
Sbjct: 570 K-----GIKYEHMHINTWQDTAGEVSDHDP 594


>gi|241760900|ref|ZP_04758989.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753130|ref|YP_003226023.1| endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|283856234|ref|YP_162080.2| endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374519|gb|EER63980.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552493|gb|ACV75439.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|283775229|gb|AAV88969.2| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 239

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 81/280 (28%), Gaps = 53/280 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ S+NI+           K        D   +      +DAD V LQE        +
Sbjct: 7   TIKVASYNIH-----------KAIGADKRRDPERILSVLDEIDADCVVLQEADHRLGKRR 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                     +    +    +  S      A+ +R     V  +   L        R   
Sbjct: 56  AILPFDALAAHGYSYVPLSLRSCSLGWHGNALLLRDFASCVAYERVRLP-------RLEP 108

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+   ++I G+   ++  HL               S     +Q  ++ D +    +  
Sbjct: 109 RGAIICDIKIRGRVWRLIGSHLDL-------------SGLFRRRQVAFIVDRLR-NLQRD 154

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P VI GDFN+     G        + P+D  +          +          +D  ++
Sbjct: 155 LPTVIMGDFNQWRRRDGCLR-----LLPDDFSVLPTGASFPAQHPLVG------LDRIII 203

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   ++                 ++ SDH P+    
Sbjct: 204 APQI--RYLECGVHNTPL--------ARQASDHLPVWAKL 233


>gi|21229767|ref|NP_635684.1| hypothetical protein XCC0289 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66766643|ref|YP_241405.1| hypothetical protein XC_0299 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188989710|ref|YP_001901720.1| hypothetical protein xccb100_0314 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21111259|gb|AAM39608.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66571975|gb|AAY47385.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167731470|emb|CAP49645.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 253

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 78/279 (27%), Gaps = 45/279 (16%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK----VFP 85
           N+ TL+   G  L      +       LR+  + + A+IV LQE+   +A+       +P
Sbjct: 12  NVLTLNAHMGFDL-----LKRRFILAALREAIREVCAEIVCLQEVLGEHALHARRHAQWP 66

Query: 86  KNTWCIFYSTERLI--NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                 + +       ++ +       H   AV  K       ++ +            R
Sbjct: 67  AVAHYEYLAEMLWPQFSYGRNAVYPHGHHGNAVLSKFPISSFANHDVSVPGH-----EPR 121

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  ++++ G    +    +                 +   QQ   L   +     +  
Sbjct: 122 GVLHAVLQVPGWSEELQVFCVHLGLH-----------EAHRQQQIGLLCARVAA-LSADA 169

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+AGDFN               +     +            +  +    +P+D   + 
Sbjct: 170 PVVVAGDFNDWRARGHP------LLTRCGLVEAVECMHGRVARSFPSRFPVLPLDRIYLR 223

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         +            RLSDH P+    
Sbjct: 224 N----------LRVVQARVLSGLP-WSRLSDHLPLLASI 251


>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum 'So ce 56']
 gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum 'So ce 56']
          Length = 961

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 82/292 (28%), Gaps = 42/292 (14%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            T   + ++R++SWN            +      T     LL +     DAD++ LQE+ 
Sbjct: 116 FTPGASARLRVLSWNTLW-------DRYDAERIHTARRRPLLVEALGRADADVIALQEVE 168

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  +        +  ++          +                L  S   +    
Sbjct: 169 LPLLDLLLGAGWVRADYTVSDGPRGRDVETCHL---------------LLLSRLPVLEVG 213

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             +    + AV + + + G+ + V+  HL S     + E             A  L+D  
Sbjct: 214 WHALGKYKAAVAMTLALAGEPLVVVATHLTS---DHAEEGARKR--------AAELEDLA 262

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN----DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                     V+ GD N       +     D + +     D    F    +     +   
Sbjct: 263 AGLSAVEGDLVLLGDLNDGGPGPASKLGLVDAWLEARGAGDEAPTFDPTVNPLAAVSSLT 322

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +D  +    A + +  +           +   G  LSDH  + ++  
Sbjct: 323 GRACRLDRVMFRGAALRPITADLEGTTP-----LPPDGLFLSDHYGVRVELS 369


>gi|260911306|ref|ZP_05917905.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 472 str. F0295]
 gi|260634566|gb|EEX52657.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 472 str. F0295]
          Length = 344

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/324 (10%), Positives = 91/324 (28%), Gaps = 60/324 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDAD------- 67
           +  +N   L +       ++           +  + T     + +   ++  D       
Sbjct: 25  VGFYNQENLFDTCHDEGKRDYEFLPSGSYKWNGMKYTHKLHNMARALADMGTDVLPGVGC 84

Query: 68  -IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
            I+ L E+ +   +  +  +       +      H +      I  A+        V   
Sbjct: 85  AIIGLAEVENAKVLTDLTAQPE---LATRGYKFCHIEGPDRRGIDCALLYNPSLFEVRNV 141

Query: 127 S-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
              P + + +  S    R  + +   + G+ + V+  HL S           +       
Sbjct: 142 KLVPYVQSLEKDSAFFTRGFLTVSGVLAGEHVTVVVCHLPSRFSDSFYREQGAR------ 195

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTIDPNDSLIRFPK 239
            Q   ++D I Q+++     ++ GD N        ++         +  + +     +  
Sbjct: 196 -QVLAIRDSI-QREDKNCKVLVMGDMNDDPMDKSMSEALRGKANINEVAEGDMYNPWYNV 253

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--------- 290
                    +   +    D  ++ +N       + ++ + Y ++ I  R           
Sbjct: 254 LTKEGVGTLQFQGSWNLFDQILLSKNWLNANGSKDYTSLKYWKNQIFRRDYLFQTEGKYK 313

Query: 291 --------------RLSDHCPISI 300
                           SDH P+ +
Sbjct: 314 GMPKRTTAGGVWLDGFSDHLPVVV 337


>gi|226953375|ref|ZP_03823839.1| exodeoxyribonuclease III [Acinetobacter sp. ATCC 27244]
 gi|226835913|gb|EEH68296.1| exodeoxyribonuclease III [Acinetobacter sp. ATCC 27244]
          Length = 274

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD+V +QE   ++     
Sbjct: 14  LRVVSINVNGLRASVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTD 58

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V   +       DS  R   
Sbjct: 59  KFKPEGWYTHLFPAERAGYA----------GTAIYSRLPFVSVTNGLGFELADSQGRF-- 106

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++     + +  ++L S    D        + +      +     + Q ++ 
Sbjct: 107 ---ITAEFDLGLSHPVHIASLYLPSGSSGD-------EAQARKDIFLEEYAKILKQWRDE 156

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N     +   +                +   I      +   +E      
Sbjct: 157 NKSIIVCGDYNIVHKRIDIKNWSGNQKSSGVLPHERAWLDHIYDELGYVDTFREVRPEAE 216

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +                      + +  SDH P
Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTANAWV-----------YKEQWFSDHAP 265

Query: 298 ISIDY 302
           + IDY
Sbjct: 266 VIIDY 270


>gi|156548838|ref|XP_001605640.1| PREDICTED: similar to GA16037-PA [Nasonia vitripennis]
          Length = 558

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/346 (10%), Positives = 86/346 (24%), Gaps = 66/346 (19%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           +    ++  ADI+ LQE+ +     
Sbjct: 198 FTVMCYNVLSDKYATRQMYGYCPSWALEWEYRKKGILDEIRHYAADIISLQEVETDQFYN 257

Query: 82  KVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
              P+     +             +                     +++  V   Q +  
Sbjct: 258 FFLPELKMDGYDGIFSPKSRAKTMAENDRKFVDGCAIFFRTAKFTLIKEHLVEFNQLAMA 317

Query: 130 LLGAKDSFSR---AGNRRAVELLVE---------INGKKIWV---LDIHLKSFCFLDSLE 174
                D         +   +  L+          +    + V   + +      +     
Sbjct: 318 NAEGSDHMLNRVMPKDNIGLAALLRTKEAAWDNGLPQDPLQVQQPILVCTAHLHWDPEFC 377

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVP-------FVIAGDFNRKINY---------- 217
           +       +LS + + + D   Q               ++ GDFN   +           
Sbjct: 378 DVKLIQTMMLSNELKSILDQAGQSFRPGHKSDASNVQLLLCGDFNSLPDSGVIEFLTSGR 437

Query: 218 -LGNNDDF--------WKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPIDYF 260
              ++ DF         + I   D    F                  N     K  IDY 
Sbjct: 438 VASDHRDFKDLAYKSCLQKISGCDKTNEFTHSFKLASAYSEDIMPYTNYTFDFKGIIDYI 497

Query: 261 VMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              + +      L   S      ++          SDH P+ ++ +
Sbjct: 498 FYSKQSMVPLGLLGPLSADWFREHKVVGCPHPHVPSDHFPLLVELE 543


>gi|56963720|ref|YP_175451.1| exodeoxyribonuclease III [Bacillus clausii KSM-K16]
 gi|56909963|dbj|BAD64490.1| exodeoxyribonuclease III [Bacillus clausii KSM-K16]
          Length = 260

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 79/301 (26%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N L                         + + +DAD+  LQE          
Sbjct: 1   MKFVSWNVNGLRACVKKGF---------------LDFFQQVDADVFCLQETKLQKG-QIS 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K+  +        G  D F     R
Sbjct: 45  LELPGYEQYWNDAERKGY----------SGTAIFTKHSPLSVT----YGIGDHFPENEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +V+ ++  +     S             +    L         +  
Sbjct: 91  -----VITLEFETYYVVTMYTPNAKRDLSRLPYRLQWEKAAREYLTLLA--------TQK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                   +       +  +     +  F        +A 
Sbjct: 138 PVVFCGDLNVAHQPIDVRNDRANVGNSGFTDEERAEFGKLLEAGFVDTFRHFYPDDEDAF 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +    +L+  S    +             SDHCPI 
Sbjct: 198 TWWSYMANVRARNIGWRIDYFLISRALMPYLVDASIHSSVL-----------GSDHCPIE 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|261337556|ref|ZP_05965440.1| exodeoxyribonuclease III [Bifidobacterium gallicum DSM 20093]
 gi|270277965|gb|EFA23819.1| exodeoxyribonuclease III [Bifidobacterium gallicum DSM 20093]
          Length = 286

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 81/311 (26%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + + N+N +   E                    ++ +    D++ LQE+ +      
Sbjct: 2   TITVTTANLNGIRAAERKGFE---------------KWVQKHTPDVLCLQELRAPQDAID 46

Query: 83  VFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              +     + +  ++          + S       +        + ++       +D+ 
Sbjct: 47  SIFEQYAEDYKNAGKIAQPEGLSTIDQVSVFKGRAGVGELSSLEVLDKRVGLPGDGEDAD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           +    R     +    G  I V +++  +    D           +L    +       +
Sbjct: 107 T---GRWTEMDVKTPQGYVITVCNLYNHAGNMDD--PTKMEQKYHMLDAIMERAAQLRDE 161

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEK 241
                   +I GDFN     L   D                   K ID  + +       
Sbjct: 162 AAHGGKQSLIVGDFNIAHTDLDIKDATTNETHSGFSPKERAYITKLIDEYEFVDVVRDLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                      N+           IDY        +       +   +     K+   R 
Sbjct: 222 GDIQGPYTWWSNRGRAFENNVGWRIDYQFATPEIAQ-------TARGFEISRAKAWYARW 274

Query: 293 SDHCPISIDYD 303
           SDH P+++ YD
Sbjct: 275 SDHAPLTVTYD 285


>gi|332520152|ref|ZP_08396616.1| exodeoxyribonuclease III Xth [Lacinutrix algicola 5H-3-7-4]
 gi|332044711|gb|EGI80905.1| exodeoxyribonuclease III Xth [Lacinutrix algicola 5H-3-7-4]
          Length = 253

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 87/302 (28%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                        ++ +  + D++ LQE+ +      V
Sbjct: 1   MKIISYNVNGIRAALKKGF---------------IEWLEGANPDVLCLQEIKAMQDQVDV 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y      N          ++ +A+  K       ++   G          R
Sbjct: 46  EAFEALGYKYHYWFSAN-------KKGYSGVAILSKIKP----NHVEFGTGIETMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++L S                        ++D++ + +E++ 
Sbjct: 95  N-----IRADFDGVSVMSMYLPSGT--------NMDRLEFKLNYMDEIQDYVNKLRETIP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------------NKN 250
             VI GD+N     +  ++   K +     + R                           
Sbjct: 142 NLVICGDYNICHEAIDIHNPKMKNVSGFLPVEREWIGNFIDSGLVDSYRYLNPEKVEYSW 201

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           +DY ++ Q   + + +        +           SDHCPI ++
Sbjct: 202 WSYRANARANNKGWRLDYAMVTQPLKQKIKRAVILTQAVH-----------SDHCPILLE 250

Query: 302 YD 303
            D
Sbjct: 251 LD 252


>gi|225441541|ref|XP_002280990.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297739794|emb|CBI29976.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 91/348 (26%), Gaps = 64/348 (18%)

Query: 19  SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           S A    ++S+NI +   +  E  S   +           L +      ADIV LQE+ S
Sbjct: 248 SSAGTFTVLSYNILSDVFATSELYSYCPSWALSWPYRKQNLLREIVGYRADIVCLQEIQS 307

Query: 77  ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  A    K+ +   Y  +    ++      D       R +   V +       A
Sbjct: 308 DHFEEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEVEFNKA 367

Query: 134 KDSFSR-----AGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----------DSLENTY 177
             S +      A  + A+  LV+ N   I VL+                    ++  N +
Sbjct: 368 AQSLTDAVVPSAQKKTALNRLVKDNVALIAVLEAKFSYQGADIPGKRQLLCVANTHINVH 427

Query: 178 SPSCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGN---------------- 220
                +   Q   L   + +   S  +P ++ GDFN       +                
Sbjct: 428 QELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPMHPDLA 487

Query: 221 -------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                                           I       R     +     +       
Sbjct: 488 IDPLGILRPASKLTHQLPLVSAYSSFARMGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIG 547

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +DY      +     + E   E    +D      +  SDH  +  ++
Sbjct: 548 TLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 595


>gi|123474556|ref|XP_001320460.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
 gi|121903266|gb|EAY08237.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
          Length = 481

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 82/291 (28%), Gaps = 24/291 (8%)

Query: 26  LVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           L+S+NI        +                 L+ +        IV LQE+       K+
Sbjct: 150 LLSYNILAPYCVRPDRFPFSPPKYLNADQRIALIEEQIIEFPVSIVCLQEVEGSVYKEKL 209

Query: 84  FPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            P      F+ T                    + +         ++ + ++        L
Sbjct: 210 EPFMHERGFHCTYCQKGRAEKLNEAFREMVHGQATFVRNSHLTVIKTECIQYRNMQQAQL 269

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               +  +  +  A+  +V+        + I      +  +  +    S   L+ +A   
Sbjct: 270 LPSFAELKKHDETAIISIVQHKSAPNLFIAIVNIHLYWEQTGNDDVRTSQLYLALEA--- 326

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              I ++  S    +IAGDFN +     +     + +  N     +     S        
Sbjct: 327 AKNIVKQHSSNYDIIIAGDFNSESQTTPH-----RWLVQNGFFDVYDSFGLSPRFTIYGA 381

Query: 252 RNKIPIDYFV--MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                ID+    +++     ++Q    E +             SDH PI  
Sbjct: 382 SFHKTIDFIYSTVNKIRPISILQSYNEEEILQRYVAFPHDYFPSDHLPIVA 432


>gi|310794858|gb|EFQ30319.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 603

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/327 (11%), Positives = 83/327 (25%), Gaps = 65/327 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAVA 81
           + +  +N+  L+              +++    +  +  +     D++F+QE+   +   
Sbjct: 293 ITVGDYNVENLAP-------------SSAHLPSIAAHIVDYMKTPDLIFVQEIQDNSGPT 339

Query: 82  -----------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
                                      F   + +          +I  A   +   V + 
Sbjct: 340 NNGIVSSNITLTTLTTEIESRSGVVYDFAVVDPVDGKDGGQPGGNIRVAYLYKPDVVELW 399

Query: 125 Q------------------QSYPLLGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDI 162
           +                  +  P   A  S +   +R+ +            K  + +++
Sbjct: 400 KPNPGGSLDANEVLPGPELKYNPGRIAPASSAWDASRKPLVAAWRTVKGTQSKTFFTVNV 459

Query: 163 HLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKIN 216
           HL S     SL     P      +   +QAQ    +I +    +     + +GDFN    
Sbjct: 460 HLASKGGSSSLHGDLRPPVNGVVNARIEQAQLAGSFIAEILAADPDASVISSGDFNEFAF 519

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                   +        L                  N   +D+  +              
Sbjct: 520 VEPLK--VFAAKSGLFDLDEVVGTPAEERYTYAYDMNAQELDHIFVSPALAARNGTAYEH 577

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +  +   + +SDH P     +
Sbjct: 578 IH---VNSWELYDELVSDHDPSVARLN 601


>gi|229161351|ref|ZP_04289336.1| hypothetical protein bcere0009_21400 [Bacillus cereus R309803]
 gi|228622165|gb|EEK79006.1| hypothetical protein bcere0009_21400 [Bacillus cereus R309803]
          Length = 349

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 87/329 (26%), Gaps = 61/329 (18%)

Query: 22  QKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYT------------LLRQYAKNLDAD 67
             + +++WNI   +       +  +   +R T  +T             +         D
Sbjct: 30  GPLTIMTWNIYFGTILTPLVGTTPEQLPQRVTEVFTLFQATNFPVRAGAIADQIARKKPD 89

Query: 68  IVFLQEMGSYNAV-----AKVFPKNTWCIFYSTERLINHSKRD------------SNNDI 110
           I+ LQE   +  +           +   I                          S+   
Sbjct: 90  IIGLQEAAIWQLLLPQNSEVAVEYDFVSILLKELEKRGLHYEVLAIVETTDATLPSSTGF 149

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV------------ELLVEINGKKIW 158
           +     R   +            +     A     V             + VEI+GKK  
Sbjct: 150 NVRFVDRDAILVRKNSGLKFSNIQTKIFEAFLPVPVGGNVEKLLFGFISVDVEISGKKFR 209

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           +++ HL+                  L  Q    ++ +T    + +P V  GDFN   +  
Sbjct: 210 LVNTHLQPITP---------EIPQTLPIQLAQTRELLTGPGATDLPLVFIGDFNSNSDGS 260

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQE 273
           G + +        D+     K     C       N   +  + ID  +   +     +  
Sbjct: 261 GPSYNLLINAGFKDTWTIAGKGNGLTCCQDANVLNLISQLFVRIDLILFRGDFKVEKVD- 319

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               I   ++D        SDH  +  + 
Sbjct: 320 ---VIGEEQEDRTPTALWPSDHAGVVANL 345


>gi|255689971|ref|ZP_05413646.1| AP endonuclease domain protein [Bacteroides finegoldii DSM 17565]
 gi|260624578|gb|EEX47449.1| AP endonuclease domain protein [Bacteroides finegoldii DSM 17565]
          Length = 361

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 67/305 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++S+N+ + S  +                  +  Y KN +ADI+ LQE  + +   
Sbjct: 99  GSIKVLSYNVMSFSNLKKKDGKNP-----------ILSYLKNSNADIICLQEYNTASNKK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V  ++      +        +R         +A   +   +  Q        +   +  
Sbjct: 148 FVTEQDVKKALKAYPYQSIRQQR----KGDVQLACFSRFPILSSQLIEYKSDYNGSMKY- 202

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----------------------- 178
                  ++ +N   I +++ HL+S          Y                        
Sbjct: 203 -------VLNVNNDTITLINNHLESNKLTKEDRGIYEDMIKDPNAKKVKTGLRQLIRKLG 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ + QA  +   I   +      ++ GDFN   +    +    + +D       F 
Sbjct: 256 EASAIRASQADSVARII--TENHYPTMIVCGDFNDG-SISYTHRVLTQELDD-----AFT 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  +   +             +    R  + SDH PI
Sbjct: 308 QSGKGLGISYNQNKFYFRIDNILISPDLKAY-------------NCTVDRSIKASDHYPI 354

Query: 299 SIDYD 303
                
Sbjct: 355 WCYIS 359


>gi|120437855|ref|YP_863541.1| exodeoxyribonuclease [Gramella forsetii KT0803]
 gi|117580005|emb|CAL68474.1| exodeoxyribonuclease [Gramella forsetii KT0803]
          Length = 253

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 89/303 (29%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S+N+N +                 +       + +  + D+V LQE+       K 
Sbjct: 1   MTIISYNVNGIRA---------------AIRKGFLDWLQQSNPDVVCLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+      +       H    +N   ++ +A+  K           +   D   R+   
Sbjct: 39  QPEQLDLSEFEKAGYPYHYWYPANKKGYSGVAILSKTEPKNVTYGTGIDYMDFEGRS--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +     V+ ++L S                L  +     + +I Q K  + 
Sbjct: 96  ------IRADFDNFSVMSLYLPSGT--------NINRLELKFKFMDDFQRYIDQLKLEIP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             +I+GD+N     +  +D                W      +  I   +  +   +   
Sbjct: 142 NLIISGDYNICHEAIDIHDPVRLKNVSGFLPEERKWIDGFMENGFIDSFRHFNEDPDNYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++ +     L +       Y+           SDHCP+ +
Sbjct: 202 WWSYRANARNNNKGWRIDYNLVSEPLKDRLRRAVILPEAYH-----------SDHCPVLV 250

Query: 301 DYD 303
           + +
Sbjct: 251 EIE 253


>gi|157118577|ref|XP_001659160.1| nocturnin [Aedes aegypti]
 gi|108883222|gb|EAT47447.1| nocturnin [Aedes aegypti]
          Length = 446

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 85/324 (26%), Gaps = 66/324 (20%)

Query: 36  EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95
             +G                 + Q     D DI+ LQE+  +  + K+     +   +  
Sbjct: 111 HNDGFVKCPIDALTWECRRYQVIQEIVQNDPDIICLQEVDHFKFLQKILATQNYEGVFFP 170

Query: 96  ERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
           +         D+N     A+  +K+ + +L     +L      S      A+    + N 
Sbjct: 171 KPDSPCLYINDNNGPDGCAVFYKKERLELLNHFTRILEVWRVQSNQVAIAALFRTRDTN- 229

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           ++I V   HLK+           +    L ++Q + L  +I        P ++ GDFN +
Sbjct: 230 QEICVTTTHLKA--------RKGALLSKLRNEQGKDLLYFIDGVA-EKRPVILCGDFNAE 280

Query: 215 INYLGNNDDF----------WKTIDPNDSLIRFPKE------------------------ 240
                 +             +  +   +      +                         
Sbjct: 281 PIEPVYSTVLNYKPLGLGSAYSDLLAQEFPQLAQENDQNVVNMVPVVQHRTSIDSNHSVE 340

Query: 241 ---------------KDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEIL 279
                            +        + +        IDY    ++         F    
Sbjct: 341 DDCSVSCSERTKAELSAAYEPPYTTWKIREEGEVCHTIDYVFYSKDQITVKNCLMFPAGE 400

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
               D     +  SDH  +  D++
Sbjct: 401 EISPDRTPCYQYPSDHFSLVCDFE 424


>gi|233305|gb|AAB19427.1| Rrp1=recombination repair protein 1 [Drosophila, Peptide, 253 aa]
          Length = 253

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 80/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ SWN+  L                        Q     + DI  LQE    +     
Sbjct: 1   LKICSWNVAGLRAWLKKDG---------------LQLIDLEEPDIFCLQETKCANDQLPE 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     +  ++                 +  +A+  K + +  +        D   R  
Sbjct: 46  EVTRIPGYHPYWLCMP-----------GGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRM- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    +K +++++++ +                L     + L          
Sbjct: 94  --------ITAEYEKFYLINVYVPNSGRKLVNLEPRMRWEKLFQAYVKKLDAL------- 138

Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P VI GD N                   +     D    +     +  F      R  
Sbjct: 139 -KPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERDKMTELLGLGFVDTFRHLYPDRKG 197

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A                  +DY ++ +     +++                    SDHCP
Sbjct: 198 AYTFWTYMANARARNVGWRLDYCLVSERFVPKVVEHEIRSQCL-----------GSDHCP 246

Query: 298 ISI 300
           I+I
Sbjct: 247 ITI 249


>gi|262037757|ref|ZP_06011199.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia
           goodfellowii F0264]
 gi|261748229|gb|EEY35626.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia
           goodfellowii F0264]
          Length = 257

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 86/300 (28%), Gaps = 54/300 (18%)

Query: 1   MIRK-YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           MI+   ++ ++ F V      A++ R++++NI       G               T + Q
Sbjct: 1   MIKTGNIIRILLFTVIALTVNAKEFRMMTYNIYGGRLANG---------------TKIGQ 45

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             K    D + LQE+  +   + +                   K    +     IA   K
Sbjct: 46  SIKRYKPDFIALQEVDKFTKRSNIRDITKDIADEMGYNFYYFQKSRDYDSGEFGIAFVSK 105

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTY 177
                  +Y L            R+ +   +E +  GK +  ++ HL       + E   
Sbjct: 106 YPIEKILTYELPSIGI-----EKRQVIAAKIEKSVFGKTVLFINTHLDYKQEAKNDELNS 160

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                            I  +        + GD N          +++  I  N      
Sbjct: 161 L---------------LIMSEIAEGDIKFLGGDLNMLPTT-----EYYNQITQNWKDTYL 200

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +K               IDY + D +    L +       +  +D      +LSDH P
Sbjct: 201 EGDKAGVRK-----NEDPRIDYILGDFSTNWKLKES------FFINDNTQEWTKLSDHLP 249


>gi|296140635|ref|YP_003647878.1| endonuclease/exonuclease/phosphatase [Tsukamurella paurometabola
           DSM 20162]
 gi|296028769|gb|ADG79539.1| Endonuclease/exonuclease/phosphatase [Tsukamurella paurometabola
           DSM 20162]
          Length = 396

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/356 (12%), Positives = 91/356 (25%), Gaps = 76/356 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNA 79
             VR+ ++N  +L+      L  +   R      ++ +  +  + D++ + E    + NA
Sbjct: 41  GTVRIATYN-ASLNRSREGELVADLGTRDNRQAQVIAEIVQRNNPDVLLINEFDYYADNA 99

Query: 80  VAKVFPKNTWCIFYSTERLINHSK-----------------------------RDSNNDI 110
            A +F  N   +    +  +++                                      
Sbjct: 100 AADLFRSNYLRVGQKGQHPVDYPYAWAPPVNTGVPSGRDLNGDGTTDGPDDAYGFGQFSG 159

Query: 111 HTAIAVRKKNVR----------VLQQSYPLLGAKDSFS-------RAGNRRAVELLVEIN 153
              + V  K              L +  P       +        R  ++   ++ V I+
Sbjct: 160 QYGLLVLSKFPIDTQAIRTFQNFLWKDQPGSMLPRDYYGANADALRLSSKTHADVPVTID 219

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-----------DWITQKKESL 202
           G++I +   H     F    +     +   +   A +L                    + 
Sbjct: 220 GQRIHLWVSHPTPPSFDGPEDRNGRRNHDEIRLSADYLAGGDRASYLYDDRGERGGLPAG 279

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID---- 258
            PFV+ GD N       +     + +       +   E   +  A  N R     D    
Sbjct: 280 EPFVLLGDQNSDPEDGDSVPGAMQQVLDLTQDPKPTSEGAEQAGAGSNHRTPSRYDTADF 339

Query: 259 -----------YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      Y +  +          F              +  SDH  + +D  
Sbjct: 340 SKPTPGNLRVDYVLPSKGLTVAGTGV-FWPAAGQPGAELMPPRTSSDHRLVWLDLT 394


>gi|148225041|ref|NP_001085229.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus
           laevis]
 gi|47937489|gb|AAH72056.1| MGC78928 protein [Xenopus laevis]
          Length = 316

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 84/302 (27%), Gaps = 73/302 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ SWN+      +G+  W                + +  D  I+ LQE+       K
Sbjct: 60  TLKISSWNV------DGIRAWIKKQG---------LNWVREEDPHIMCLQEI---KCAEK 101

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P +   +    E    +       + ++ +A+  K+  +       +   D   R   
Sbjct: 102 LLPPDVKDM---PEYPHKYWACPDEKEGYSGVAMLCKDKPLNVTYGIGIEEHDKEGR--- 155

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++       +V+  ++ +        +             + L        +S 
Sbjct: 156 ------VITAEFDSFFVIAAYIPNSSRGLVRLDYRQRWDVDFRAYLKGL--------DSK 201

Query: 203 VPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N                   +       +  +     L  F +    + +A
Sbjct: 202 KPLILCGDLNVAHQEIDLKNPKTNKKTPGFTPQERQGFGELLAEGYLDSFRELYPDKPSA 261

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DYFV+ +     L        +             SDHCPI
Sbjct: 262 YTFWTYMMNARAKNVGWRLDYFVLSKALRPALCDCKIRSKV-----------MGSDHCPI 310

Query: 299 SI 300
           ++
Sbjct: 311 TL 312


>gi|262277234|ref|ZP_06055027.1| exodeoxyribonuclease III [alpha proteobacterium HIMB114]
 gi|262224337|gb|EEY74796.1| exodeoxyribonuclease III [alpha proteobacterium HIMB114]
          Length = 263

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 89/305 (29%), Gaps = 73/305 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80
            + + SWNIN                        + +Y   +D DI+  QE+        
Sbjct: 7   TMIISSWNIN----------------SVRIRTENIEKYLDKIDPDIIMFQEIKCEDDKFP 50

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              F K  +  +                  +  +A+  K   +       +         
Sbjct: 51  NDFFEKKNYNCYV------------FGQKSYNGVAIISKKKLL------NIDKSFKDPNK 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +R  +   ++I GK + ++ I+L +   +++ +  Y        +      ++I ++  
Sbjct: 93  QSR-LIAADIKIAGKLVKLICIYLPNGNPVNTDKYPYK------LKWLNNFINFIKKEIH 145

Query: 201 SLVPFVIAGDFNRKINYLG-------------------NNDDFWKTIDPNDSLIRFPKEK 241
           +    +I GDFN   N                                 +   +   ++K
Sbjct: 146 NYDGIIIGGDFNIIPNSNDVGNPEDWGNDALYRLEIRKEFRKILNLGFKDSFRLFNTEDK 205

Query: 242 DSRCNAN---KNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                        RNK   ID+F++  +    +            D       + SDH P
Sbjct: 206 QYTFWDYTQGSWQRNKGLRIDHFLITDSICSKIKNVEI-------DKFTRGLNKPSDHSP 258

Query: 298 ISIDY 302
           I +++
Sbjct: 259 IRVNF 263


>gi|147789110|emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 91/348 (26%), Gaps = 64/348 (18%)

Query: 19  SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           S A    ++S+NI +   +  E  S   +           L +      ADIV LQE+ S
Sbjct: 248 SSAGTFTVLSYNILSDVFATSELYSYCPSWALSWPYRKQNLLREIVGYRADIVCLQEIQS 307

Query: 77  ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  A    K+ +   Y  +    ++      D       R +   V +       A
Sbjct: 308 DHFEEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEVEFNKA 367

Query: 134 KDSFSR-----AGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----------DSLENTY 177
             S +      A  + A+  LV+ N   I VL+                    ++  N +
Sbjct: 368 AQSLTDAVVPSAQKKTALNRLVKDNVALIAVLEAKFSYQGADIPGKRQLLCVANTHINVH 427

Query: 178 SPSCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGN---------------- 220
                +   Q   L   + +   S  +P ++ GDFN       +                
Sbjct: 428 QELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPMHPDLA 487

Query: 221 -------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                                           I       R     +     +       
Sbjct: 488 IDPLGILRPASKLTHQLPLVSAYSSFARMGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIG 547

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +DY      +     + E   E    +D      +  SDH  +  ++
Sbjct: 548 TLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 595


>gi|84490435|ref|NP_031896.3| deoxyribonuclease gamma precursor [Mus musculus]
 gi|3913469|sp|O55070|DNSL3_MOUSE RecName: Full=Deoxyribonuclease gamma; Short=DNase gamma; AltName:
           Full=DNase I homolog protein DHP2; AltName:
           Full=Deoxyribonuclease I-like 3; Short=DNase I-like 3;
           AltName: Full=Liver and spleen DNase; Short=LS-DNase;
           Short=LSD; Flags: Precursor
 gi|2905788|gb|AAC35753.1| liver and spleen DNase precursor [Mus musculus]
 gi|4098208|gb|AAD09222.1| DNase gamma [Mus musculus]
 gi|28192377|gb|AAK07733.1| DNase gamma [Mus musculus]
 gi|148688630|gb|EDL20577.1| deoxyribonuclease 1-like 3 [Mus musculus]
          Length = 310

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 95/302 (31%), Gaps = 34/302 (11%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           +L+ F++    ++A  +RL S+N+ +            S K       ++ +  K    D
Sbjct: 12  SLLLFILALHDTLA--LRLCSFNVRSFGA---------SKKENHEAMDIIVKIIKRC--D 58

Query: 68  IVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           ++ L E+   +      + +    N+         + +   R++  + + A   ++K V 
Sbjct: 59  LILLMEIKDSSNNICPMLMEKLNGNSRRSTTYNYVISSRLGRNTYKEQY-AFVYKEKLVS 117

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           V +  Y     +D  +   +R    +        +    I                 S  
Sbjct: 118 V-KTKYHYHDYQDGDTDVFSREPFVVWFHSPFTAVKDFVIVPLHTTPET--------SVK 168

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
            + +      D  +Q K     F+  GDFN   +Y+         +  +   +    +++
Sbjct: 169 EIDELVDVYTDVRSQWKTEN--FIFMGDFNAGCSYVPKKAWQNIRLRTDPKFVWLIGDQE 226

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISI 300
                         I   +  Q     ++  S     + +    S  + L  SDH P+  
Sbjct: 227 DTTVKKSTSCAYDRI--VLCGQEIVNSVVPRSSGVFDFQKAYDLSEEEALDVSDHFPVEF 284

Query: 301 DY 302
             
Sbjct: 285 KL 286


>gi|254671628|emb|CBA09333.1| putative endonuclease [Neisseria meningitidis alpha153]
          Length = 259

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N+N +        +               +Y     ADIV +QE+ +  A    
Sbjct: 2   LKIISANVNGIRSAYKKGFY---------------EYIATSGADIVCVQELKAQEADLSA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN   +                   ++ +AV  K           +G          R
Sbjct: 47  DMKNPHGMHGHWHCAEKRG--------YSGVAVYSKRKP----DNVQIGMGIEEFDREGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +  ++ V+ ++L S    +  +        +  +        +   K    
Sbjct: 95  F-----VRCDFDRLSVISLYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                        +         
Sbjct: 143 DIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++        +                + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLV 251

Query: 300 IDYDF 304
           ++YD+
Sbjct: 252 MEYDY 256


>gi|301167117|emb|CBW26696.1| hypothetical protein BMS_1876 [Bacteriovorax marinus SJ]
          Length = 254

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 86/270 (31%), Gaps = 38/270 (14%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
            ++D  +L++      +D+   QE+            N       T +   +       +
Sbjct: 5   YSTDPIVLKKILSKNISDLNGFQEIVDTGFFKNFIHSNFKDHDVITSKCGGYG------N 58

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSF 167
              +    KK  + ++    L     +   +G R  +++ ++   + K  WV  +HLK+ 
Sbjct: 59  QKLSFVYNKKKFQHIRTEEDLAITGKNSCNSGVRPLLKINLKDFTSKKIFWVYLVHLKAG 118

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                     S        Q +    ++  +      +VI GDFN    +    + F K 
Sbjct: 119 S--------NSKDIQFRDTQLK----YLKSQLSPKNAYVIMGDFNTTQYFHSEGNYFHKF 166

Query: 228 IDPNDSLIRFPKEKDSRCNANKNL------RNKIPIDYFVMDQNAYKFLIQESFSEILY- 280
           I             +  C++               +D+ ++ +       +  F+   + 
Sbjct: 167 IRD---AKLIASSSEIDCSSYWWGGINDGLYYPSLLDHILVTKELVGNFNRIDFTNTEHC 223

Query: 281 --------NEDDIKSRGKRLSDHCPISIDY 302
                   +  ++      +SDHCPI  + 
Sbjct: 224 AQNTCQIASLQELGQSYNSVSDHCPIRAEL 253


>gi|239627663|ref|ZP_04670694.1| exodeoxyribonuclease III [Clostridiales bacterium 1_7_47_FAA]
 gi|239517809|gb|EEQ57675.1| exodeoxyribonuclease III [Clostridiales bacterium 1_7_47FAA]
          Length = 311

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/333 (11%), Positives = 81/333 (24%), Gaps = 81/333 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L++ N ++L E+              +      +     + DI+ LQE+      A V
Sbjct: 1   MKLMTLNTHSLEEEN-----------YEAKLHAFAEGVCRAEPDIIALQEVNQTQIAAPV 49

Query: 84  FPKNTWCIFYSTE----------------------------------------------R 97
             K+     Y                                                  
Sbjct: 50  DKKDLELYGYVPCAPCTPYAPHAQCASVSQCSVHPSPIPRTDNHAYRAARICAEHGRPYH 109

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
                 +         +A+  +      + + +  ++D  +    R+ + + +       
Sbjct: 110 WTWIGAKTGYGKYDEGLAILSRIPIAETKQFYITASQDYANWK-TRKILGIGIAAEHGME 168

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
           +   +H+  +   D                   L+ +         P  + GDFN   + 
Sbjct: 169 YFYTVHMGWWKDEDEPFEGQWERIRRELGDGACLETY-------PGPVWLMGDFNSPAHV 221

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMDQNAYKFL 270
            G   D  +     DS      +       +     +         IDY    +      
Sbjct: 222 RGEGRDLIRGFGWLDSYELAGSKDSGITVGHAIDGWREQGDVSGMRIDYIWTSRK----- 276

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                           S    +SDH  I ++Y+
Sbjct: 277 ----VPVRSSRVIFNGSYEPIVSDHYGIIVEYE 305


>gi|169829765|ref|YP_001699923.1| exodeoxyribonuclease [Lysinibacillus sphaericus C3-41]
 gi|168994253|gb|ACA41793.1| Exodeoxyribonuclease [Lysinibacillus sphaericus C3-41]
          Length = 251

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 87/303 (28%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +    G                    +   ++AD   +QE        ++
Sbjct: 1   MKFISWNVNGIRACLGKGF---------------LDFFHQIEADFFCIQETKCQAGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++  +   +          +  A+  K+  +  +     G  D  S+   R
Sbjct: 46  A-LDGYEQYWNYAQKKGY----------SGTAIFTKHTPLSVK----YGVGDEDSQDEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++++++  +     +           L+   Q L         S  
Sbjct: 91  I-----ITLEYEDFYLVNVYTPNAQRDLARLPLRLTWEEHLASYLQDLN--------SKK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N     +                     +  +  +  +  F  +  +  +  
Sbjct: 138 PVVYCGDLNVAHTEIDLKNAKSNIGNSGFTYEERAKFSELLASGFVDSFRYKHPNETDHF 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     + Q +    +             SDHCPI 
Sbjct: 198 TWWSYMNKVRERNIGWRIDYFIVSEQLKNQINQATIHPHI-----------MGSDHCPIE 246

Query: 300 IDY 302
           +  
Sbjct: 247 LQL 249


>gi|295704797|ref|YP_003597872.1| exodeoxyribonuclease III [Bacillus megaterium DSM 319]
 gi|294802456|gb|ADF39522.1| exodeoxyribonuclease III [Bacillus megaterium DSM 319]
          Length = 253

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 83/304 (27%), Gaps = 79/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                         Y + + AD+  +QE         +
Sbjct: 1   MKLISWNVNGIRACVRKGF---------------LDYFQEVTADVFCIQETKLQEGQIDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +  +             +    ++  AV  K   +          +D        
Sbjct: 46  QLEGYYQYW-----------NYAVKKGYSGTAVFTKQKPLSVSFGVDKELEDEGR----- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +V++++  +     +           L    + L         S  
Sbjct: 90  -----IITLEFEQCYVVNVYTPNSKRDLARLEERLQWEDDLLVYLKKLN--------SRK 136

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +                       T+  +  L  F     ++  A 
Sbjct: 137 AVILCGDLNVAHAEIDLRNPKPNRGNSGFTIEERGKMTTLLASGFLDTFRYLYPNQEGAY 196

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     + + +    +             SDHCP+ 
Sbjct: 197 TWWSYMNKVRERNIGWRIDYFIVSERIKDVIQEAAIHPHV-----------MGSDHCPVM 245

Query: 300 IDYD 303
           ++ +
Sbjct: 246 LELN 249


>gi|254438485|ref|ZP_05051979.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 307]
 gi|198253931|gb|EDY78245.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 307]
          Length = 289

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 85/298 (28%), Gaps = 42/298 (14%)

Query: 15  PCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           P  A     +R+ ++N++   L   +G     +  +R       L+   K LDAD++  Q
Sbjct: 21  PVQAPKPNTLRIATYNVHYIWLGRSQGDWSVGDWERRKGP----LQTAFKTLDADVIGFQ 76

Query: 73  EMGSYNAVA-------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           EM S+                       +     +               + +       
Sbjct: 77  EMESFGRGQAPANLTLDWLESQNLDYAAAAVGDPSTFPSTQPIFYRKDRLLLRDQGWFFF 136

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
              P +    +F+ +    A     E  +G    V ++H +              S S  
Sbjct: 137 SDTPDVIYSRTFNGSWPAFASWAEFEGRDGTIFRVYNLHTEY------------RSRSNR 184

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
              A  +   I +  +  +P  + GDFN               ++  +      +     
Sbjct: 185 RLSAALVAQRIAEPMQR-MPVFVIGDFN-----AIRGSATLGLLEDANVTFWPAQGSKFH 238

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N   NL     ID         + ++              +  G+  +DH P+  D+
Sbjct: 239 FNRGLNLFP--AIDRI----GGSERIVP----VGETFSVRGQFDGEWATDHYPVVGDF 286


>gi|182413315|ref|YP_001818381.1| exodeoxyribonuclease III Xth [Opitutus terrae PB90-1]
 gi|177840529|gb|ACB74781.1| exodeoxyribonuclease III Xth [Opitutus terrae PB90-1]
          Length = 253

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 83/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N +                         Y   +DAD++ LQE        K 
Sbjct: 1   MKLVSWNVNGVRAVLKKGF---------------LDYMGKVDADVICLQE-------TKA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +   + ++           +    ++  A+  +   +       L   D   R    
Sbjct: 39  HPGDVQHVAWTAGYTP--HWYSAVKKGYSGTALFTRVAPLKVNFGIGLPGHDDEGR---- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       ++++++  +     +     +               ++ + ++   
Sbjct: 93  -----VITAEFADFFLVNVYQPNSQRGLTRLKYRTEEWDP------AFLAFLKKLEKKGK 141

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N                           +  +  +  +  F + +    +  
Sbjct: 142 PVVFCGDLNVAHQEIDLTNPKTNRRNAGFTDEERANFSKLLASGFVDTFREFEKGPGHYT 201

Query: 249 KNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            +DYFV  +     L +              S     SDHCP+ +
Sbjct: 202 WWSQMMNCRARNIGWRVDYFVASEKLKPALKRAWI-----------SPEVMGSDHCPVGL 250

Query: 301 DY 302
           + 
Sbjct: 251 EL 252


>gi|332359057|gb|EGJ36878.1| exodeoxyribonuclease [Streptococcus sanguinis SK49]
          Length = 275

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  +ADI+ +QE     +    
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSASGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  +    G  
Sbjct: 55  KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E +G   +V  ++  +        +      +  ++    L        +   
Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATL--------DEQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|323351082|ref|ZP_08086739.1| exodeoxyribonuclease [Streptococcus sanguinis VMC66]
 gi|322122806|gb|EFX94515.1| exodeoxyribonuclease [Streptococcus sanguinis VMC66]
 gi|325687044|gb|EGD29067.1| exodeoxyribonuclease [Streptococcus sanguinis SK72]
          Length = 275

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 85/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  +AD++ +QE     +    
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADVIAIQETKLSASGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  +    G  
Sbjct: 55  KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E +G   +V  ++  +        +      +  ++    L        +   
Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATL--------DEQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|29833749|ref|NP_828383.1| hypothetical protein SAV_7207 [Streptomyces avermitilis MA-4680]
 gi|29610873|dbj|BAC74918.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 445

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 80/294 (27%), Gaps = 36/294 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
               ++++N+  L E    +        T      + +       DIV +QE  +Y+A  
Sbjct: 31  GTFSVLTYNVAGLPESLSSASTPRDTSTTE-----IGRRIAPY--DIVNVQEDFNYHAYL 83

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + +    S       +   S  +  +  A    +      +   + + D  +  G
Sbjct: 84  YSTDTHPYRTATS-----GGAGIGSGLNTVSTYAWDGDDFERAGWNSCQIDSGDCLTPKG 138

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                       G  +   ++H  +               +  +     L  +I     +
Sbjct: 139 --FTFMRERLAEGVYVDFYNLHTNAGTNDGDE--------ASRADNLDQLTSFIGTH-SN 187

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-FPKEKDSRCNAN----------KN 250
               V+ GD N +     +    +   +          +   +    +            
Sbjct: 188 GNAVVVMGDTNTRYTRSADTIAEFAAANGLTDAWVKLIRGGAAPAKGSDALVCDQTGATV 247

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +D  +   +    L   S+         + S G  LSDH PI+  + +
Sbjct: 248 PNTCEVVDKILYRGSKLVTLDATSYDNEHA--AFLNSDGLMLSDHDPITAAFSW 299


>gi|291450703|ref|ZP_06590093.1| large secreted protein [Streptomyces albus J1074]
 gi|291353652|gb|EFE80554.1| large secreted protein [Streptomyces albus J1074]
          Length = 606

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/332 (8%), Positives = 77/332 (23%), Gaps = 71/332 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMG 75
           A    ++ + ++N+  L   +               +  L +         D++ L+E+ 
Sbjct: 297 AQAKNELAVATYNVENLDPGDP-----------QEKFDALARAVVTNLASPDVLALEEIQ 345

Query: 76  SYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             N                            +      + +      +   +I  A    
Sbjct: 346 DDNGPTDDGTVSADETLRRFTEAITAAGGPRYDW-RGIDPVDKADGGEPGGNIRQAFLFN 404

Query: 118 KKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKK 156
              V    +                       P        +   +R+ +       G++
Sbjct: 405 PARVSFTDRPGGDATTATGVVRERGGAALTHSPGRVDPADPAWQNSRKPLAGEFTFRGER 464

Query: 157 IWVLDIHLKSFCFL----DSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           ++++  H  S           +     S +    QA  +  ++ +    +     ++ GD
Sbjct: 465 VFLIANHFASKGGDEPLAGHRQPPTRSSETQRHAQAASVNTFVKKLLSADRKAKVLVLGD 524

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
            N                              +   +     N   +D  ++      F 
Sbjct: 525 INDFEFSAT----TQTLTAGKALKPAALSLPPAERYSYVFQGNSQILDQILVTPAVKHFH 580

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    + + +        SDH P  + +
Sbjct: 581 YDSVHINAEFADQN--------SDHDPQVLRF 604


>gi|239978820|ref|ZP_04701344.1| large secreted protein [Streptomyces albus J1074]
          Length = 618

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/332 (8%), Positives = 77/332 (23%), Gaps = 71/332 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMG 75
           A    ++ + ++N+  L   +               +  L +         D++ L+E+ 
Sbjct: 309 AQAKNELAVATYNVENLDPGDP-----------QEKFDALARAVVTNLASPDVLALEEIQ 357

Query: 76  SYNAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             N                            +      + +      +   +I  A    
Sbjct: 358 DDNGPTDDGTVSADETLRRFTEAITAAGGPRYDW-RGIDPVDKADGGEPGGNIRQAFLFN 416

Query: 118 KKNVRVLQQSY---------------------PLLGAKDSFSRAGNRRAVELLVEINGKK 156
              V    +                       P        +   +R+ +       G++
Sbjct: 417 PARVSFTDRPGGDATTATGVVRERGGAALTHSPGRVDPADPAWQNSRKPLAGEFTFRGER 476

Query: 157 IWVLDIHLKSFCFL----DSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGD 210
           ++++  H  S           +     S +    QA  +  ++ +    +     ++ GD
Sbjct: 477 VFLIANHFASKGGDEPLAGHRQPPTRSSETQRHAQAASVNTFVKKLLSADRKAKVLVLGD 536

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
            N                              +   +     N   +D  ++      F 
Sbjct: 537 INDFEFSAT----TQTLTAGKALKPAALSLPPAERYSYVFQGNSQILDQILVTPAVKHFH 592

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    + + +        SDH P  + +
Sbjct: 593 YDSVHINAEFADQN--------SDHDPQVLRF 616


>gi|184159856|ref|YP_001848195.1| exonuclease III [Acinetobacter baumannii ACICU]
 gi|213159082|ref|YP_002321080.1| exodeoxyribonuclease III [Acinetobacter baumannii AB0057]
 gi|215481899|ref|YP_002324081.1| exodeoxyribonuclease III [Acinetobacter baumannii AB307-0294]
 gi|239503819|ref|ZP_04663129.1| catabolite repression control protein [Acinetobacter baumannii
           AB900]
 gi|301347005|ref|ZP_07227746.1| catabolite repression control protein [Acinetobacter baumannii
           AB056]
 gi|301510728|ref|ZP_07235965.1| catabolite repression control protein [Acinetobacter baumannii
           AB058]
 gi|301597923|ref|ZP_07242931.1| catabolite repression control protein [Acinetobacter baumannii
           AB059]
 gi|332850148|ref|ZP_08432535.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013150]
 gi|332868976|ref|ZP_08438535.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013113]
 gi|332872852|ref|ZP_08440817.1| exodeoxyribonuclease III [Acinetobacter baumannii 6014059]
 gi|183211450|gb|ACC58848.1| Exonuclease III [Acinetobacter baumannii ACICU]
 gi|193078676|gb|ABO13730.2| catabolite repression control protein [Acinetobacter baumannii ATCC
           17978]
 gi|213058242|gb|ACJ43144.1| exodeoxyribonuclease III [Acinetobacter baumannii AB0057]
 gi|213986663|gb|ACJ56962.1| exodeoxyribonuclease III [Acinetobacter baumannii AB307-0294]
 gi|322509770|gb|ADX05224.1| exonuclease III [Acinetobacter baumannii 1656-2]
 gi|323519783|gb|ADX94164.1| catabolite repression control protein [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332730997|gb|EGJ62303.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013150]
 gi|332733019|gb|EGJ64221.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013113]
 gi|332739013|gb|EGJ69875.1| exodeoxyribonuclease III [Acinetobacter baumannii 6014059]
          Length = 274

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD+V +QE   ++    +
Sbjct: 14  LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 58

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V  +        DS  R   
Sbjct: 59  KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSIKDGLGFELADSQGRF-- 106

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++     + +  ++L S    +        + +            + Q ++ 
Sbjct: 107 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 156

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD+N     +   +                +   I      +   +   +   
Sbjct: 157 NKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAE 216

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +     +                + +  SDH P
Sbjct: 217 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTVNAWV-----------YKDQWFSDHAP 265

Query: 298 ISIDY 302
           + IDY
Sbjct: 266 VIIDY 270


>gi|315920604|ref|ZP_07916844.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2]
 gi|313694479|gb|EFS31314.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2]
          Length = 341

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 92/343 (26%), Gaps = 59/343 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++ L    +    +  Q+       +  +N+  L +        +           
Sbjct: 1   MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           +  +  +    + +    L  D       I+ + E+ +Y  +  +  +            
Sbjct: 61  NTMKYKAKLKNMSEILSLLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQ 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H + +    +  A     K   +      +     + +    R  +     I G+K+ 
Sbjct: 118 YVHYEGEDQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTIHKTRGFLIASGNIAGEKMH 176

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  H  S           SP+     +Q + +KD +  +++S    VI GD N      
Sbjct: 177 FIVNHWPSR-------AAASPARERAGEQVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 228

Query: 219 GNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271
                         + P D    +                    D  V   N        
Sbjct: 229 SMAVALGAKRKPADVGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 288

Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297
            + +   ++  D +  +  +                  SDH P
Sbjct: 289 LKFYKHEIFRRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 331


>gi|297846512|ref|XP_002891137.1| hypothetical protein ARALYDRAFT_313975 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336979|gb|EFH67396.1| hypothetical protein ARALYDRAFT_313975 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 290

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 69/275 (25%), Gaps = 24/275 (8%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAKVFPKNTWC-IFYSTERLINHSKRDSN 107
             +    +    KN +AD + LQE+  Y +   +    + +  I++              
Sbjct: 12  WDNRSKAILDNLKNFEADFICLQEVDEYISFFDRNMEAHGYTGIYFPRGEGYKRDGCAIF 71

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR-------RAVELLVEINGKKIWVL 160
                A  +    V     +     A      A ++             +      + ++
Sbjct: 72  FKPKFAELITYNIVDYNNLAERRCVASTIHGDAVSKLKCDCIGILAAFKILKPFNHVVII 131

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
                     D  ++        L  +    K  I+  +      ++AGDFN   +    
Sbjct: 132 ATTHLKSGKSDEWDDVKLAQAKSLMFELAMFKRTISAVENCSPSVILAGDFNSNPSSDVY 191

Query: 221 ND-------DFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYK 268
                      W      +                             +DY     +   
Sbjct: 192 EYVNSDNIPVMWPLGGEEEETEFGLCSAYGFTKGEPKFTKYVPGFAETLDYVFFTPS--D 249

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+      +   +  D        SDH PI ++++
Sbjct: 250 FISPVKLLDSP-DVVDFLPNKSHPSDHLPIGVEFE 283


>gi|269103989|ref|ZP_06156686.1| hypothetical extracellular nuclease [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163887|gb|EEZ42383.1| hypothetical extracellular nuclease [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 781

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/384 (11%), Positives = 98/384 (25%), Gaps = 106/384 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWK-----------------NSVKRTTSDY----TLLRQYAK 62
           +++ S+N+                              N   +T +D+    T +     
Sbjct: 303 LKVASFNVLNFFTSASSIGGDLNVTCQDQADADASKGCNRGAKTEADFVLQRTKIVNALT 362

Query: 63  NLDADIVFLQEMGSY-----NAVAKVFPKN---------TWCIFYSTERLINHSKRDSNN 108
            +DADIV + EM +      +A+A +              +       +  N  +   ++
Sbjct: 363 AMDADIVGIMEMENNGFGDNSAIANLVEHLNAQWSDTSQHYRFIEIAAKDKNQGQYFGSD 422

Query: 109 DIHTAIAVR----KKNVRVLQQSYPL-------LGAKDSFSRAGNRRAVELLVEING--- 154
            I  A+  R               P           ++       R ++     +N    
Sbjct: 423 AIMVAMLYRPAKVTPKGDAEVIRMPEQHIVGTSPEGEEKQLDKYQRDSLLQSFTVNHAKQ 482

Query: 155 --KKIWVLDIHLK-----------SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             K + ++  HLK           +  F     +      +     AQ L + + + K  
Sbjct: 483 KQKTLTIVVNHLKSKGSGCYEDWVNGEFDSDPADLQRRCNAFRVSAAQVLANSLKKVKGD 542

Query: 202 LVPFVIAGDFNRKINYLG---------------------------NNDDFWKTIDPN-DS 233
               ++ GD N                                        + +      
Sbjct: 543 ---LLVIGDMNSYGMEDPIRVLTNYKPNQAQRKIMTASGTSIAGVPYQAVGQEVGKGLGL 599

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291
                +       +         +D+ + +++  K ++      I   E+ +    ++  
Sbjct: 600 KNLATQWHGKDSYSYSFGGELGSLDHALANKSLAKKVVGIEDWHINSVENALFEYSRKYS 659

Query: 292 -----------LSDHCPISIDYDF 304
                       SDH P+ I   +
Sbjct: 660 GELAKSEGPYSASDHDPVIISLHY 683


>gi|163856676|ref|YP_001630974.1| hypothetical protein Bpet2363 [Bordetella petrii DSM 12804]
 gi|163260404|emb|CAP42706.1| conserved hypothetical protein [Bordetella petrii]
          Length = 266

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 77/287 (26%), Gaps = 50/287 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78
              ++L++ N++                        L+   ++   DIVFLQE+    + 
Sbjct: 21  GTTIKLLTVNVHKGFTLFNRRF----------ILHELKAALRDAGPDIVFLQEVIGTHHR 70

Query: 79  AVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++        +     S      + +     +     AV  +   V  Q++ +    
Sbjct: 71  HARRLAAWPATSQYEFLADSLWSDFAYGRNAVYPEGDHGNAVLSRWPIVTHQNHDV---- 126

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S     +R  ++  V        +  + +                 +    Q   L   
Sbjct: 127 -SVDNHESRGMLQCTVRHPDLAGDMHAVCVHLGLR-----------EAHRRAQLGQLCAL 174

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + Q+     P ++ GDFN               +        F +               
Sbjct: 175 V-QRLGDDAPVLVGGDFNDWRRRASP------LLAACRLHDVFRRALGREPRTFPARWPL 227

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           + +D   +   A    +  +               + LSDH P++ +
Sbjct: 228 LALDRIYVRDVAAARPVPLASRV-----------WRHLSDHAPLAAE 263


>gi|331082708|ref|ZP_08331831.1| hypothetical protein HMPREF0992_00755 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330400327|gb|EGG79969.1| hypothetical protein HMPREF0992_00755 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 354

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/326 (13%), Positives = 100/326 (30%), Gaps = 64/326 (19%)

Query: 17  TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           T S+   +R++++NI               G  +  +S ++  ++   + +      AD+
Sbjct: 50  TLSLDDSLRIITYNIGYAGLDKSEDFFMDGGSEVQPDSKEQVETNLKGIEKVLTENPADV 109

Query: 69  VFLQEMGSYNAVAKVFPKNTW---------------CIFYSTERLINHSKRDSNNDIHTA 113
            FLQE+   +  +    +  +                  +    L    K +S     T 
Sbjct: 110 YFLQEVDKDSKRSFHIDETEYLKSSLNMEGIFAYNFKCDFVPYPLPPIEKVNSGIFTMTD 169

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + V       L +S+       +  R        + +E    ++ +++ HL+++   D  
Sbjct: 170 LKVNSAARLALPESFSWPVKTCNLKRCMQE--TRIPLEGTDAELVLINFHLEAYDDGDGK 227

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------RKINYLGNNDDFWKT 227
                        Q++ L + ++++ E+    +  GDFN       K       +     
Sbjct: 228 IA-----------QSKMLAEKLSKEYEAGNYVIAGGDFNQTFEGMDKYPITNTENWVPGI 276

Query: 228 IDPN---DSLIRFPKEKDSRCNANKNLRNKIP-------IDYFVMDQNAYKFLIQESFSE 277
           I  +   +       +    C                  ID F++  N     I    ++
Sbjct: 277 IGQDTLPEHFSFAVDDTYPTCRLLNAPYTGSYETSQVYVIDGFIVSDNITVSDISVINTD 336

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
             Y             DH P+ ++  
Sbjct: 337 FEYT------------DHQPVQMEIS 350


>gi|307243437|ref|ZP_07525593.1| exodeoxyribonuclease III [Peptostreptococcus stomatis DSM 17678]
 gi|306493161|gb|EFM65158.1| exodeoxyribonuclease III [Peptostreptococcus stomatis DSM 17678]
          Length = 275

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       + +    +DADI+ LQE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARALLSRD------VLKNLAGMDADIIALQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +S    +  S  +     +       K    ++ +YP +GA      +  R
Sbjct: 55  KHIECLEEIFSDYDHVWRSSVEPARKGYAGTMFLYKKGMDVKATYPEIGAP-CTMDSEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +        +         +   + L            
Sbjct: 114 I-----ITLELDSCYVTQVYTPNAGDGLKRLDDRQAWDKKYADYLEGLAKH--------K 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +     + +  +     +  F +         
Sbjct: 161 PVLACGDYNVAHKEIDLANPASNHRSPGFTDEEREGFTNLLARGFVDTFRQVHGDVEEVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++ Q+    +      +    +           DH PI
Sbjct: 221 SWWAQRVKTSKVNNTGWRIDYWIVSQDVADKVRVSEMVDSGERQ-----------DHAPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 LLEVE 274


>gi|148697887|gb|EDL29834.1| deoxyribonuclease 1-like 1, isoform CRA_b [Mus musculus]
          Length = 321

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 77/303 (25%), Gaps = 33/303 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  V+A +  L+       +  R+ ++N + L+          +     S    L Q  
Sbjct: 26  MRGLVMAPLLILLVGGT---EAFRICAFNAHRLTL---------AKLTKESVMDTLVQIL 73

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI+ LQE+   +     F         S   L +     S          R    
Sbjct: 74  ARC--DIMVLQEVVDSSQNTVPFLLQKLKSSRSYSFLNSSLLGRSTYKEKYVYIYRSDKT 131

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPS 180
           +VL          +       R        +  K +  V+ + L +       E      
Sbjct: 132 QVLN-----FYQYNDTDDIFAREPFVAHFTLPSKTLPSVVLVPLHTTPKDVEKELNALYD 186

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             L   Q                  ++ GDFN     L         +           +
Sbjct: 187 VFLDVYQRWQ-----------NENVILLGDFNADCASLTKKRLKSLLLRTKAGFHWVIPD 235

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +              I   V  Q     L   +  +        +    R+SDH P+ +
Sbjct: 236 GEDTTVRASTNCTYDRI--VVHGQGCQMLLKAAATFDFPKRFQLTEEEALRISDHYPVEV 293

Query: 301 DYD 303
           +  
Sbjct: 294 ELS 296


>gi|15892269|ref|NP_359983.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7]
 gi|15619409|gb|AAL02884.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7]
          Length = 286

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+ A     DI+ LQE    +++   
Sbjct: 16  MKIVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVADSL--- 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       S    +  +A+  K       S  L  +         R
Sbjct: 57  ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 103

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +I     +V           D  +   +       +  + +++W+T  +    
Sbjct: 104 HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 156

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N   +                         +  +    +             
Sbjct: 157 KMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFIDSSRHFVSLDEKF 216

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L          +           SDH P
Sbjct: 217 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGAL-------FSMHLLSEARDWSSPSDHVP 269

Query: 298 ISIDYD 303
             + ++
Sbjct: 270 YFVTFN 275


>gi|113983|sp|P23196|APEX1_BOVIN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|118|emb|CAA40014.1| BAP 1 [Bos taurus]
          Length = 318

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 78/311 (25%), Gaps = 74/311 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       S +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPVELQELSGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++  ++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EYDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++ Q+            +    D      
Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQS-----------VLPALCDSKIRSK 303

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 304 ALGSDHCPITL 314


>gi|301060638|ref|ZP_07201465.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
 gi|300445250|gb|EFK09188.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
          Length = 293

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 81/322 (25%), Gaps = 74/322 (22%)

Query: 6   VLALVFFLVPCTASV---------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           +L  V   +     V            + ++++NI  L  +  V     +V R       
Sbjct: 21  LLIAVALALFLFGPVYGKLDRGNNGASLSVMTYNIWDLGGKRPVLKNVEAVVRGAGI--- 77

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                     D++ LQE+      A +     +           H    +       +++
Sbjct: 78  ---------PDVLLLQEVRGEKMAASLAGSLGF----------PHHLYRAARGHGYGVSI 118

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +   +    +    +         R  +   V   G+K+ +  +HL     +D  +  
Sbjct: 119 LSRYPLIESGFFYFKSS------KSGRGVLGATVVFEGRKLRLCSVHLDRIDSIDVDQQG 172

Query: 177 YSPSCSL--------------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
              S                  S+  + L  W           +I GDFN          
Sbjct: 173 AHLSWDEAVSLLAHETTNETVRSRCVKELLAW-----AGSDRVIIGGDFNTIFCS----K 223

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
              K     +  +    +  +       L     +D+    +     L      E     
Sbjct: 224 AVRKMETVFEDALAGTSDYLTGTYTKSGLPVAPRLDFLFYSKELAC-LKAHVVRESAG-- 280

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
                      DH P+   + F
Sbjct: 281 -----------DHYPVKAVFSF 291


>gi|227541681|ref|ZP_03971730.1| endonuclease/exonuclease/phosphatase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227182649|gb|EEI63621.1| endonuclease/exonuclease/phosphatase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 880

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/344 (13%), Positives = 100/344 (29%), Gaps = 75/344 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWK----------------------NSVKRTTSDYTLLRQY 60
           ++ L S+N+       G +                          S +  T     +   
Sbjct: 474 ELSLASFNVLNYFTTLGETEEGCKAYTDREGNNVTANWCTVRGAWSTQAFTRQQAKIVNA 533

Query: 61  AKNLDADIVFLQEMGS-----------YNAVAKVFP-----------KNTWCIFYSTERL 98
              L+  ++ L+E+ +             A++K+             + TW +  S E++
Sbjct: 534 INTLNVSVLGLEEIENTASVTGDASRRDEALSKLVAALNADLTARGKEPTWELVASPEKV 593

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
                    + I  A    K  V  +  S  +     +             V     +  
Sbjct: 594 PGRE-----DVIRVAFIYNKTKVAPVGPSVIIDDPAYTGVARQPLGQAFARVGQKDPEFV 648

Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNR 213
            +  H KS   +   +   +     + +L ++QA+ L   I   +E + +P  + GD N 
Sbjct: 649 AVVNHFKSKGSVARGDKDQNDGQGNNPNLRAEQARALTKAIAAHEEWNDMPVFVVGDLNS 708

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                       K ++                ++ +       +D+   +  A K ++  
Sbjct: 709 YTKED-----TMKVLEDAGYTNIA--ATYDSGHSYQFAGRIGSLDHAFGNAAAMKLVVDA 761

Query: 274 SFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303
              +I  +E       +              R SDH PI + ++
Sbjct: 762 DVWDINSDESIAFEYSRENYNIAPLVDDSVFRSSDHDPIKVAFN 805


>gi|227487151|ref|ZP_03917467.1| endonuclease/exonuclease/phosphatase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227092809|gb|EEI28121.1| endonuclease/exonuclease/phosphatase [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 880

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/344 (13%), Positives = 100/344 (29%), Gaps = 75/344 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWK----------------------NSVKRTTSDYTLLRQY 60
           ++ L S+N+       G +                          S +  T     +   
Sbjct: 474 ELSLASFNVLNYFTTLGETEEGCKAYTDREGNNVTANWCTVRGAWSTQAFTRQQAKIVNA 533

Query: 61  AKNLDADIVFLQEMGS-----------YNAVAKVFP-----------KNTWCIFYSTERL 98
              L+  ++ L+E+ +             A++K+             + TW +  S E++
Sbjct: 534 INTLNVSVLGLEEIENTASVTGDASRRDEALSKLVAALNADLTARGKEPTWELVASPEKV 593

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
                    + I  A    K  V  +  S  +     +             V     +  
Sbjct: 594 PGRE-----DVIRVAFIYNKTKVAPVGPSVIIDDPAYTGVARQPLGQAFARVGQKDPEFV 648

Query: 159 VLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNR 213
            +  H KS   +   +   +     + +L ++QA+ L   I   +E + +P  + GD N 
Sbjct: 649 AVVNHFKSKGSVARGDKDQNDGQGNNPNLRAEQARALTKAIAAHEEWNDMPVFVVGDLNS 708

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                       K ++                ++ +       +D+   +  A K ++  
Sbjct: 709 YTKED-----TMKVLEDAGYTNIA--ATYDSGHSYQFAGRIGSLDHAFGNAAAMKLVVDA 761

Query: 274 SFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303
              +I  +E       +              R SDH PI + ++
Sbjct: 762 DVWDINSDESIAFEYSRENYNIAPLVDDSVFRSSDHDPIKVAFN 805


>gi|12322547|gb|AAG51276.1|AC027135_17 hypothetical protein [Arabidopsis thaliana]
 gi|12597833|gb|AAG60143.1|AC074360_8 hypothetical protein [Arabidopsis thaliana]
          Length = 335

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 77/311 (24%), Gaps = 58/311 (18%)

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
           R  +    +    KNL AD   LQE+  Y++  +    +        +R     +     
Sbjct: 23  RWKARSHAILSVLKNLQADFFCLQEVDEYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAI 82

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------------------ 144
               + A      R+           DS S +  +                         
Sbjct: 83  FYKPSCAELVTKERIEYNDLVDSIKADSVSCSEQKIETSNEGKGDEKAKDKFVLLEEKKA 142

Query: 145 ------------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                              +     IN     ++ +      +   L +        L  
Sbjct: 143 NTFRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLYWDPELADVKLAQAKYLLS 202

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINY----------LGNNDDFWKTIDPNDSLIR 236
           +    K  I+ + E     ++AGDFN                   +   +   P      
Sbjct: 203 RLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYLVSGNAKPTETIEEEEAPVPLSSV 262

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY----NEDDIKSRGKRL 292
           +   +      N        +DY  +  +   F+   S  ++      +           
Sbjct: 263 YEVTRGEPKFTNCTPGFTNTLDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHP 320

Query: 293 SDHCPISIDYD 303
           SDH PI  +++
Sbjct: 321 SDHLPIGAEFE 331


>gi|325096045|gb|EGC49355.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus H88]
          Length = 330

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 28/303 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  +RL+++N+   ++  G    K   +R  +  T +       D   V +QE+ 
Sbjct: 36  PFPNKSLSLRLMTFNVRYAAKPSGN--EKAWSERRGNLITQVAYEMGATDNVFVGMQEVL 93

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130
                  V   N+       +       RD    +  ++ I  RK    +++        
Sbjct: 94  HNQLEDIVNGLNSHPSSGGNDWAYIGVGRDDGKQSGEYSPILYRKSLWELVEMDTKWLSE 153

Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                     A NRR V + V  N +   +  +                         ++
Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRNKRTKAMALVMNTHL---------DHQVSEARLHGSE 204

Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +   I + K            ++ GDFN +             I  +       K    
Sbjct: 205 LILKLIGEYKNKRQYKCKLTGVILTGDFNSEEGQEAYKVVTESKILVDPVKKFGDKNIYG 264

Query: 244 RCNANKNLRN---KIPIDYFVMD-QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298
                    +      IDY  +   N   +  + ++    Y    +    G   SDH  +
Sbjct: 265 NRKTFTGFDSEVGLTRIDYVFVGQGNLCGWGDKGTWDVNRYAVLPNKFDDGIFFSDHRAV 324

Query: 299 SID 301
             D
Sbjct: 325 VAD 327


>gi|295136350|ref|YP_003587026.1| exodeoxyribonuclease [Zunongwangia profunda SM-A87]
 gi|294984365|gb|ADF54830.1| exodeoxyribonuclease [Zunongwangia profunda SM-A87]
          Length = 253

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 86/303 (28%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N+N +                 +       + +  + D+V LQE+       K 
Sbjct: 1   MRIISYNVNGIRA---------------AIRKGFLDWIQQANPDVVCLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P       ++           +    ++ +A+  K       ++   G    +     R
Sbjct: 39  QPDQLNLEEFTDAGYPYQYWYPAKKKGYSGVAILSKTEP----NHVEYGTGIDYMDDEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +     V+ ++L S                   Q     + +I   K+ + 
Sbjct: 95  N-----IRADFGDFSVMSLYLPSGT--------NINRLEHKLQYMDDFQQYIDSLKQQIP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             +I GD+N     +  +D                W         I   +  +   +   
Sbjct: 142 NLIICGDYNICHEAIDIHDPVRLKNVSGFLPVEREWIDNFMKSGFIDSFRYFNDEPDQYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++     + L +       Y+           SDHCPI +
Sbjct: 202 WWSYRANARANNKGWRIDYNLVAAPLQEKLKRAVILPEAYH-----------SDHCPILV 250

Query: 301 DYD 303
           + +
Sbjct: 251 ELE 253


>gi|254384957|ref|ZP_05000292.1| exodeoxyribonuclease [Streptomyces sp. Mg1]
 gi|194343837|gb|EDX24803.1| exodeoxyribonuclease [Streptomyces sp. Mg1]
          Length = 268

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 71/271 (26%), Gaps = 56/271 (20%)

Query: 60  YAKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           +    DAD+V LQE+ +  A    +      W   ++           +       +AV 
Sbjct: 24  WLAGSDADVVCLQEVRAEEAQIPDEARVPEGWHTVFAP----------AAAKGRAGVAVY 73

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +      +        D+  R        L V++ G  + V  ++L S       ++  
Sbjct: 74  TRREPERVRVGFGSEEFDTSGR-------YLEVDLPG--VTVASLYLPSGEAGTEKQDEK 124

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNN 221
                      + L++            V+ GD+N                         
Sbjct: 125 YRFMGEFLTYLEGLRERA---AAEGREVVVCGDWNICHREADLKNWKTNRKNAGFLPEER 181

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
               +  D    +                   +           ID  V         ++
Sbjct: 182 AWLGEVYDRAGYVDVVRALHPDTEGPYSWWSYRGRAFDNDAGWRIDLQVATPGLAARAVK 241

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     +  ++  +R SDH P+++ Y+
Sbjct: 242 AFV-------ERAETHPERWSDHAPVTVVYE 265


>gi|330501089|ref|YP_004377958.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01]
 gi|328915375|gb|AEB56206.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01]
          Length = 290

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/294 (10%), Positives = 82/294 (27%), Gaps = 62/294 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
                +RL+S+N+      +    +     +         ++   +       D D+V L
Sbjct: 29  PADGLLRLLSFNVQVGINTQRYHHYLTRSWQHLLPHAGRANNLQRIADLLA--DFDLVAL 86

Query: 72  QEMGSYNAVAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           QE+   +  +    +  +      +       +            +  R +   +     
Sbjct: 87  QEVDGGSLRSGYVNQVEYLAQQGAFPYWYQQLNRNLGRFAQHSNGVLSRLRPTLLEDHPL 146

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           P             R A+ L +    + + V+ +HL                    ++Q 
Sbjct: 147 PGPPG---------RGAIFLRLGEGEQALGVVMMHLALG-------------ARTRTRQL 184

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            ++++ +++        V+ GD N               +  N  L              
Sbjct: 185 AYIRERVSEF----RHLVLMGDMNTHAVD----------LLENSPLRDLGLLAPQVEATF 230

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + R +  +D+ ++        +                  + +SDH P++++ 
Sbjct: 231 PSWRPQRCLDHILLSSELELGRVDV--------------LSQPISDHLPVAVEI 270


>gi|288800678|ref|ZP_06406135.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332139|gb|EFC70620.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 270

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 92/303 (30%), Gaps = 80/303 (26%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
               K++++++NI +      V+ +               +  ++ +ADI+ L E+ + +
Sbjct: 20  FAQDKIKVITFNIRSFEPDFDVAPY--------------AELLRSEEADIICLNEVENRS 65

Query: 79  AVAK------------VFPKNTWCIFYSTERLINHSKRDSNNDIHT------AIAVRKKN 120
           +  +                N + IF  +  L N        +           A+  + 
Sbjct: 66  SRQQRDGKFRDVVAELAQKLNMFEIFGYSYNLANKRGEYPEENYRYSLNELYGNAILSRY 125

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSP 179
             +      L   K S   A  R  V   + +  KK   +   HL               
Sbjct: 126 PILNSNCLQLPRPKGS---ADQRGVVYADILLPTKKMFRIASTHLDHMGG---------- 172

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPNDSLIR 236
                 +QA+ L     +   S +P ++ GD N+       N     F +  + N + + 
Sbjct: 173 ----QLEQAEVLVS--DKVYTSSIPMILTGDMNQGPGSSVINKIETAFERMDNDNGTYLG 226

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             K                 ID+    +  + F              D    GK LSDHC
Sbjct: 227 LSK-----------------IDFIFGSKGKWTF--------ESCRVLDRFFNGKELSDHC 261

Query: 297 PIS 299
           P+ 
Sbjct: 262 PVV 264


>gi|224372849|ref|YP_002607221.1| exodeoxyribonuclease III [Nautilia profundicola AmH]
 gi|223588651|gb|ACM92387.1| exodeoxyribonuclease III [Nautilia profundicola AmH]
          Length = 250

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 77/303 (25%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N                   S   +++   K  D D++ +QE+         
Sbjct: 1   MRICTFNVN----------------SIRSRLEIVQNLIKEYDIDVLCMQEIKVEED---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       +    +            +AV  +      Q                R
Sbjct: 41  ---------KFPKIDEEYECVIHGQKKLNGVAVCSRIPIEKYQK------GFEGELEEAR 85

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L+      +I ++++++          + Y             L +++++   S  
Sbjct: 86  FIYSLI-----DEIHIINVYVPLG-------DNYGERFEYKIYFYNKLFEFLSRFDLSKD 133

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N   + L                        I     +    +E +      
Sbjct: 134 KVVLCGDMNVAYSDLDVWDPEIWEGEVTFLPEEKAMINNILNMGFVDVI-REFNKNERVY 192

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + +DY  +     K +               + R    SDH PI 
Sbjct: 193 TFYDYRGAKVYKNEGMRLDYVFLSPTLAKEVKNVEIL-----TSVRRKRKPTPSDHVPII 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 VEL 250


>gi|312087189|ref|XP_003145373.1| hypothetical protein LOAG_09798 [Loa loa]
 gi|307759462|gb|EFO18696.1| hypothetical protein LOAG_09798 [Loa loa]
          Length = 293

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 81/311 (26%), Gaps = 56/311 (18%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N   L+                +    + ++ K ++ D+V LQE+     +  +   
Sbjct: 1   MTFNT-WLTGNN-----------VENGLAKIAKHIKRINPDVVALQEINDIKRLQHL--- 45

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                  +       + + + +   TAI  + K +                    NR   
Sbjct: 46  ------ITEMGKGWVTAKSTYSYTDTAILTKHKLINRSFHQVSHGMGVKIEIENTNRTIN 99

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQKKESL-- 202
              + ++ +         K       +            Q  + L   D+     E+   
Sbjct: 100 IWSLHLDYQSYGPYAAFNKMVTKASQIMAGEIVDGKGRFQNMRELLVDDYFQAAIENSSI 159

Query: 203 VPFVIAGDFNRKINYLGNN-------DDFWKT-----------------------IDPND 232
            P ++ GDFN   +    N       D  ++                        +D   
Sbjct: 160 EPLIVCGDFNSPSHLDWTNQTSFLHGDWKFQWPATHMLQNEAGMKDSYRELHPQVLDNPG 219

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD-IKSRGKR 291
                 ++  S   +      +  IDY     +    +   ++   +         +   
Sbjct: 220 ITWSTVEKMTSSGWSWTIPEPQDRIDYIFYRGSLLSPIQSYTYQGNVTVYPKPFHWKNDY 279

Query: 292 LSDHCPISIDY 302
            SDH  +   +
Sbjct: 280 PSDHFAVITTF 290


>gi|255071691|ref|XP_002499520.1| predicted protein [Micromonas sp. RCC299]
 gi|226514782|gb|ACO60778.1| predicted protein [Micromonas sp. RCC299]
          Length = 414

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/340 (13%), Positives = 107/340 (31%), Gaps = 59/340 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYNA 79
            K+ +V+WN+  L     +     SV+   +    + +    L+   D+V LQE+    A
Sbjct: 76  DKLFIVTWNVQMLP--GVLPGCAGSVRHLVARAEQIAERILELEPWPDVVVLQEVWHPYA 133

Query: 80  VAKVFPKN--TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--VRVLQQSYPLLGAKD 135
            +++  +    +   ++         R       T + V  +   + +  + +    ++ 
Sbjct: 134 RSELRCRLLGRYQHIHAPGAGSLAGARPGGQSCKTGLLVLSRYHNLHLEHRFHKFQASQG 193

Query: 136 SFSRAG----------NRRAVELLVEINGKKIWVLD-IHLKSFCFLDSLENTYSPSCSLL 184
             S A            R+  ++  ++ G    V           + +  + +       
Sbjct: 194 VESWAFGKGVSATAIRLRKHTDIQGKVEGIGFRVRPRTRCFVLFNVHAQSDYWRCGARTR 253

Query: 185 SQQAQWLKDWITQKKES-----LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           ++Q + ++D+I +  E      +   ++ GD N +      +       +P D L    +
Sbjct: 254 ARQMEEVRDFIQESIEDFGHLDVRRAILCGDLNVEAGTCECDAAMATLGNPRDLLCWNER 313

Query: 240 EK--DSRCNANKNLRNK---------------IPIDYFV-MDQ-NAYKFLIQESFSEILY 280
           E+   +        R                   +DY + +    A+    + +  E  +
Sbjct: 314 EERVWAPTFPIGRWRYDPCDDSRCRYAPLTPTKRLDYVLDVTHTEAFVRGREVTMEENRF 373

Query: 281 NEDDI----------------KSRGKRLSDHCPISIDYDF 304
           +                     + G  LSDH P+     F
Sbjct: 374 DPPTADAFSHARTLTTGVTQRGTDGTPLSDHAPVLAMIAF 413


>gi|115398812|ref|XP_001214995.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191878|gb|EAU33578.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 436

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/323 (9%), Positives = 72/323 (22%), Gaps = 58/323 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  + +R+++ N   L       + K   +R +     L     +   +IV LQE  +  
Sbjct: 10  SSPETIRILTLNCWGL-----KYIAKYRYQRLSEIGRQLA--LADPPPEIVGLQECWTQQ 62

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GA 133
               +  +    +         + K          +A+  K        +         A
Sbjct: 63  DYESIRQQTRHLL--------PYGKFYFGGIWGAGLAILSKWPIEESSMHAYPLNGRPTA 114

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    +      +      +  +     +       +          + QA  +  
Sbjct: 115 FFRGDWYVGKGVACARIRFGAHPVHDVAEVFCTHLHAPYEKEPNDSYICHRTAQAWEIAK 174

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-----------NDSLIRFPKEKD 242
            +    +     +  GDFN   + +  +      IDP            +  +R      
Sbjct: 175 LMRGAADRGHLVIGLGDFNMLPSVIHPDSSVGAAIDPVEKKRNRPVPSAEFNLRVNGATC 234

Query: 243 SRCNANKNLRNKI----------------------PIDYFVMDQNAYKFLIQESFSEILY 280
                                               +DY  +  +             + 
Sbjct: 235 DGRFNTWRWEKAERKRLARGEDVTVDPDAPCPRGKRLDYIFVGPS-----RWAVDDVRIA 289

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
                 +    LSDH  +     
Sbjct: 290 MTQRHPTLKCSLSDHFAVEAVIS 312


>gi|109499818|ref|XP_223499.3| PREDICTED: APEX nuclease (apurinic/apyrimidinic endonuclease) 2
           [Rattus norvegicus]
 gi|109500734|ref|XP_001059968.1| PREDICTED: APEX nuclease (apurinic/apyrimidinic endonuclease) 2
           [Rattus norvegicus]
          Length = 516

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 80/331 (24%), Gaps = 72/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         + +        T LR   + LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGLGCEVTSNC----PTALRHILRELDADIVCLQETKVSRDALTE 57

Query: 82  KVFPKNTWC-IFYSTERLINHSKRDSNNDIHTA-----------IAVRKKNVRVLQQSYP 129
            +     +   F  +     +S   +                   A    +V        
Sbjct: 58  PLAVVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQFATLSGHVGCYGNMNE 117

Query: 130 LLGAKDSFSRAGNRRAV----ELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184
               +     +  R  +        E   K + +++++                    LL
Sbjct: 118 FTQEQLRALDSEGRALLTQHKICTQEGKEKPLTLINVYCPHASPGNHERLTFKMRFYRLL 177

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------------YLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N   +                         +  
Sbjct: 178 QIRAEALLA-------AGSHVIILGDINTAHHPIDHCNAGNLECFEEDLGRRWMDGLLSN 230

Query: 231 NDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQ 272
            +                                          +DY + +++       
Sbjct: 231 LEYPAGSHIGPFMDSYRYFYPKQERAFTCWSMISGARSLNYGTRLDYILGNRDL------ 284

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +D         SDHCP+    +
Sbjct: 285 ----IIDTLQDAFLLPEVMGSDHCPVGAVLN 311


>gi|26989983|ref|NP_745408.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida KT2440]
 gi|24984902|gb|AAN68872.1|AE016519_5 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 257

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 80/286 (27%), Gaps = 56/286 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79
           + +++ N++                        LR+  +   AD+VFLQE+      +  
Sbjct: 21  LNVLTLNVHKGFTFFNRRF----------ILPELREAVRATGADLVFLQEVHGSHQQHAL 70

Query: 80  VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +P+     F +        + +           A+  K       +  +    +  
Sbjct: 71  RHPAWPETPQYEFLADSMWPQFAYGRNAVYPHGDHGNALLSKFPIRRFNNLDVSVQGN-- 128

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  +   +E+ G    V  + +                 +   +Q + + D +  
Sbjct: 129 ---EQRGLLHCQLEVPGHD-EVHAVCVHLGLR-----------EAHRQRQVKLMLDLLAS 173

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P +IAGDFN            W+            +   +   +       + +
Sbjct: 174 -LPPNAPVIIAGDFND-----------WRLKADAVLSEHLTEAFGTPARSFPARLPLLRL 221

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +        +  +   +       K     LSDH P++ + +
Sbjct: 222 DRIYLRNA-----VPGAAQVLS------KYPWSHLSDHVPLAAEIN 256


>gi|4826698|ref|NP_004935.1| deoxyribonuclease gamma precursor [Homo sapiens]
 gi|2494173|sp|Q13609|DNSL3_HUMAN RecName: Full=Deoxyribonuclease gamma; Short=DNase gamma; AltName:
           Full=DNase I homolog protein DHP2; AltName:
           Full=Deoxyribonuclease I-like 3; Short=DNase I-like 3;
           AltName: Full=Liver and spleen DNase; Short=LS-DNase;
           Short=LSD; Flags: Precursor
 gi|1399719|gb|AAB63967.1| DNase1-Like III protein [Homo sapiens]
 gi|2905786|gb|AAC35752.1| liver and spleen DNase precursor [Homo sapiens]
 gi|16198371|gb|AAH15831.1| DNASE1L3 protein [Homo sapiens]
 gi|119585762|gb|EAW65358.1| deoxyribonuclease I-like 3, isoform CRA_a [Homo sapiens]
 gi|119585763|gb|EAW65359.1| deoxyribonuclease I-like 3, isoform CRA_a [Homo sapiens]
 gi|123986698|gb|ABM83776.1| deoxyribonuclease I-like 3 [synthetic construct]
 gi|123999020|gb|ABM87096.1| deoxyribonuclease I-like 3 [synthetic construct]
 gi|189053848|dbj|BAG36108.1| unnamed protein product [Homo sapiens]
          Length = 305

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 95/290 (32%), Gaps = 32/290 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
            A  +R+ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N 
Sbjct: 17  SALAMRICSFNVRSFGE---------SKQEDKNAMDVIVKVIKRC--DIILVMEIKDSNN 65

Query: 79  ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + +   +N+         + +   R++  + + A   ++K V V ++SY     +
Sbjct: 66  RICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQ 123

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D  +   +R    +  +     +    I                 S   + +  +   D 
Sbjct: 124 DGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPET--------SVKEIDELVEVYTDV 175

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             + K     F+  GDFN   +Y+         +  +   +    +++            
Sbjct: 176 KHRWKAEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAY 233

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             I   +  Q     ++ +S S   + +    +  + L  SDH P+    
Sbjct: 234 DRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281


>gi|332299266|ref|YP_004441187.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica
           DSM 20707]
 gi|332176329|gb|AEE12019.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 357

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/341 (11%), Positives = 85/341 (24%), Gaps = 55/341 (16%)

Query: 6   VLALVF-FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDY 54
           +L+L F  +    ++  Q+V +  +N+  L +                   +++R     
Sbjct: 16  LLSLSFGIIYAQQSTTPQRVTVAFYNLENLFDTIDQENNDEEFLPEGANRWTLERYQHKL 75

Query: 55  TLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             +      +  D   I+ + E+ +   +  +  + +          I H        I 
Sbjct: 76  RNMSHVISLIGGDGPAIIGVAEIENRGVLEDLIAEES---LRDKHYDIVHYDSPDRRGID 132

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
            AI  + +  +V       +   +       R  V     ++G+ + VL  H  S    +
Sbjct: 133 CAILYQPEVYKVFASGARAVEIPNEPWIK-TRDVVYASGLLDGEIVHVLVGHWPSRSGGE 191

Query: 172 SLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----- 225
           ++  +    +   +   A  L              ++ GDFN         D        
Sbjct: 192 AVSLHRRMAAAKTMRSVADSL-----YTLFPGSKVIMMGDFNDDPISPSVRDGLGVQNHP 246

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---------------- 269
               P D      +  +               D   ++                      
Sbjct: 247 DQTKPADYYTPMLQLYNKGMGTLAYRDVWNLFDIIAVNGELIGSNPTTWQLYRDPETTDM 306

Query: 270 ----------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                          +                 SDH P+ +
Sbjct: 307 AFIFKQPFMIQQSGQYKGYTLRTFVGGQWQGGYSDHFPVYV 347


>gi|205356520|ref|ZP_03223283.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205345525|gb|EDZ32165.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 259

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 8   MKLLSWNVNGLRAICDKNA---------------LDWIAQEQIDFIGFQEI---KAHEDK 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 50  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFNSEVKK-------CEFFDDEEGR 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +        L            
Sbjct: 98  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 145

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 146 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 205

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 206 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 254

Query: 300 IDYD 303
           I+ D
Sbjct: 255 IEID 258


>gi|154276148|ref|XP_001538919.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150413992|gb|EDN09357.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 301

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 74/295 (25%), Gaps = 21/295 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        K    R       L  ++ +     + LQE+        
Sbjct: 8   PIRILTHNIRY-ATSAPFRGEKPWKDRKQRLLNELHYHSCHNPETFICLQEVLHVQLNDI 66

Query: 83  VFPKNT-----------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +   N            W            +   S      A+   +++  V     P +
Sbjct: 67  LSGLNPSTSTSTGATTEWAYIGVGRDDGKQAGEYSPIFYRPAVWELEESKTVWLSETPSV 126

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                +  +  R     + +    +  VL +        D    +   +  L+   A   
Sbjct: 127 P-SRGWDASSIRIVTIGVFKHLVSRKRVLGMSTHL---DDQGSKSRYEAAKLILTMANLY 182

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRCNAN 248
                    ++    +AGDFN + +            + +D    +    +         
Sbjct: 183 LTKNRLASRNINGIFLAGDFNSEEDQEAYRVLTAVDSQFVDAQKQVDTALRYGSENTYTG 242

Query: 249 KNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     IDY +               E      +    G   SDH  +  D
Sbjct: 243 FGYEDEGPKRIDYVLFGPKRGANPAWSWSIEGYAVVPNKFDDGVLNSDHRAVVAD 297


>gi|324993723|gb|EGC25642.1| exodeoxyribonuclease [Streptococcus sanguinis SK405]
 gi|324994964|gb|EGC26877.1| exodeoxyribonuclease [Streptococcus sanguinis SK678]
 gi|327462994|gb|EGF09315.1| exodeoxyribonuclease [Streptococcus sanguinis SK1]
          Length = 275

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  +    G  
Sbjct: 55  KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E +G   +V  ++  +        +      +  ++    L            
Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATLDQ--------QK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|315656371|ref|ZP_07909260.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492930|gb|EFU82532.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 294

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 73/283 (25%), Gaps = 48/283 (16%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            + +N D+D++ LQE+ +     +      W +     R+   +         +      
Sbjct: 21  DWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRVKGRAGVALGARRDSD----W 76

Query: 119 KNVRVLQQSYPLLGAK--DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +  ++ +   P L A+          R     +    G    ++  +L S       +  
Sbjct: 77  EIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLVSAYLHSGELRTEKQEQ 136

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDD----------- 223
                  + ++ Q L         S  P   +I GDFN         +            
Sbjct: 137 KIAYLHRVGERVQQLSARAMAGAGSDTPQEALICGDFNIVRTARDIKNWKPNHNKTSGVM 196

Query: 224 ----------FWKTIDPNDSLIRFPKE---KDSRCNANKNLRNK---------IPIDYFV 261
                        T+  +  L                      +           +DY +
Sbjct: 197 DEEIAFLDAWMADTLSGSKRLPCVDVGRALAGDTDGPYTWWSWRGKAYDNNAGWRLDYHM 256

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       +            +   R +DH P+++ YDF
Sbjct: 257 ATPGLAGQAQSAAV-------YRAPAYDARFTDHAPVTVTYDF 292


>gi|189461652|ref|ZP_03010437.1| hypothetical protein BACCOP_02315 [Bacteroides coprocola DSM 17136]
 gi|189431624|gb|EDV00609.1| hypothetical protein BACCOP_02315 [Bacteroides coprocola DSM 17136]
          Length = 360

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 85/301 (28%), Gaps = 53/301 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               + ++L+++N   ++  +     + +          +  Y ++ DADI+ LQE    
Sbjct: 95  PEGGEVIKLLTYNTQDIALTKEYDKQEGNP---------VLNYLRDSDADIICLQEFNPS 145

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             V +         +    R+               +A   +   +  ++       ++ 
Sbjct: 146 AKVKQKEIDRALACYPYHVRVKGEGPG--------RLACYSRYPILSAETIDYKTESNAS 197

Query: 138 SRAGNRRAVELLVEINGK---------KIWVLDIHLKSFC------FLDSLENTYSPSCS 182
                +   + LV IN              V +  LKS            L +  +   +
Sbjct: 198 ILYRLKFGNDTLVLINNHLESNKLDAHDKTVYNDILKSPREKNIKNGGKHLFHKIAKVVA 257

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           + + QA  +   I          ++ GDFN        +    + ++       + K   
Sbjct: 258 VRAPQADSVAQAIA--VNRTRYMLVCGDFNDSPISYA-HRVVGQGLND-----VYRKAGR 309

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    R    ID+               F  +    D   +     SDH P+    
Sbjct: 310 GPGFTYYENRFYFRIDHIFASDA---------FRILECKIDRSINT----SDHYPVWCLL 356

Query: 303 D 303
           +
Sbjct: 357 E 357


>gi|57237312|ref|YP_178325.1| exodeoxyribonuclease III [Campylobacter jejuni RM1221]
 gi|148926400|ref|ZP_01810084.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8486]
 gi|57166116|gb|AAW34895.1| exodeoxyribonuclease III [Campylobacter jejuni RM1221]
 gi|145844792|gb|EDK21897.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 259

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 8   MKLLSWNVNGLRAICDKNA---------------LDWIAQEQIDFIGFQEI---KAHEDK 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 50  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFNSEVKK-------CEFFDDEEGR 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +        L            
Sbjct: 98  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMQFYADFLVYLDKLLK-------DGF 145

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 146 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 205

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 206 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 254

Query: 300 IDYD 303
           I+ D
Sbjct: 255 IEID 258


>gi|329770087|ref|ZP_08261482.1| hypothetical protein HMPREF0433_01246 [Gemella sanguinis M325]
 gi|328837398|gb|EGF87028.1| hypothetical protein HMPREF0433_01246 [Gemella sanguinis M325]
          Length = 356

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 93/309 (30%), Gaps = 61/309 (19%)

Query: 29  WNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--- 77
           WNI               G  +          +   + Q  K+ +ADI  LQE+      
Sbjct: 63  WNIGYAGLDKDEDFFMDGGKMVLPLDKAHVEENIKNIAQIIKDENADITLLQEVDEDSKR 122

Query: 78  -------NAVAKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
                  + + K    N+   +            +    N+ I+TA           Q  
Sbjct: 123 SYNINQVSYLDKELGLNSILAYNFKVKYIPYPWPTLGKVNSGIYTATKHNVDRAERYQMP 182

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            P    +   +       +   VE + K++ +++          +  + Y         Q
Sbjct: 183 IPFTFPEKLANLKRGFSVIYSKVENSDKQLVIIN----------AHFDAYDKENKGKIAQ 232

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRK------------INYLGNNDDFWKTIDPNDSLI 235
            + L +++ ++ +     ++  DFN+                L   ++F K++ P    +
Sbjct: 233 TKQLVEFVQKEYKKGNYVLVGADFNQSLKTLSKEEINKVPEDLWRAENFDKSLIPEGFKL 292

Query: 236 RFPKEKDS------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            + + K+S         +         ID +++  N     +            +   + 
Sbjct: 293 VYDESKNSARLNNKPYVSGSEGTYGFIIDGYMVSDNIEVVSV------------ETLGQD 340

Query: 290 KRLSDHCPI 298
            R SDH P+
Sbjct: 341 YRYSDHNPV 349


>gi|257125492|ref|YP_003163606.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
 gi|257049431|gb|ACV38615.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
          Length = 241

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 84/282 (29%), Gaps = 45/282 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           + RL+++NI       G                 L Q  K    D + LQE+      +K
Sbjct: 2   EFRLITYNIFGARLTNG---------------KELAQSLKKYKPDFIGLQEVDRNTKRSK 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                               K    +     IA   K      ++  +     +      
Sbjct: 47  FRDVVQEMAQELGYSYYYFQKAMDFDSGEYGIAFISKY---DVKNIYIHQLPGNSKEKRQ 103

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             A  L +E   KKI V++ HL +             S    +++   L   I +     
Sbjct: 104 VLAARLKIEKFKKKILVVNTHLDN-------------SLDNKNEELADLFAAIEEF--KG 148

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFV 261
               + GDFN          +F++ I  N +   F  +     +  +N       IDY +
Sbjct: 149 DIKFLCGDFNLLPTT-----EFYQKIAENWNDTYFEGKDLENKSNLENRNLETQRIDYIM 203

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +++     Q       +  +D      +LSDH P     +
Sbjct: 204 AKKDSNYRTKQS------FFINDDLQEWTKLSDHLPYMAILE 239


>gi|149047282|gb|EDL99951.1| rCG36041 [Rattus norvegicus]
          Length = 485

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 80/331 (24%), Gaps = 72/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         + +        T LR   + LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGLGCEVTSNC----PTALRHILRELDADIVCLQETKVSRDALTE 57

Query: 82  KVFPKNTWC-IFYSTERLINHSKRDSNNDIHTA-----------IAVRKKNVRVLQQSYP 129
            +     +   F  +     +S   +                   A    +V        
Sbjct: 58  PLAVVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQFATLSGHVGCYGNMNE 117

Query: 130 LLGAKDSFSRAGNRRAV----ELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184
               +     +  R  +        E   K + +++++                    LL
Sbjct: 118 FTQEQLRALDSEGRALLTQHKICTQEGKEKPLTLINVYCPHASPGNHERLTFKMRFYRLL 177

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------------YLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N   +                         +  
Sbjct: 178 QIRAEALLA-------AGSHVIILGDINTAHHPIDHCNAGNLECFEEDLGRRWMDGLLSN 230

Query: 231 NDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQ 272
            +                                          +DY + +++       
Sbjct: 231 LEYPAGSHIGPFMDSYRYFYPKQERAFTCWSMISGARSLNYGTRLDYILGNRDL------ 284

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +D         SDHCP+    +
Sbjct: 285 ----IIDTLQDAFLLPEVMGSDHCPVGAVLN 311


>gi|114587559|ref|XP_001174037.1| PREDICTED: deoxyribonuclease gamma isoform 2 [Pan troglodytes]
 gi|114587561|ref|XP_001174043.1| PREDICTED: deoxyribonuclease I-like 3 isoform 3 [Pan troglodytes]
 gi|114587563|ref|XP_001174051.1| PREDICTED: deoxyribonuclease I-like 3 isoform 4 [Pan troglodytes]
          Length = 305

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 94/286 (32%), Gaps = 32/286 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +R+ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N     
Sbjct: 21  LRICSFNVRSFGE---------SKQEDQNAMDVIVKVIKRC--DIILVMEIKDSNNRICP 69

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +   +N+         + +   R++  + + A   ++K V V ++SY     +D  +
Sbjct: 70  ILMEKLNRNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQDGDA 127

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +R    +  +     +    I                 S   + +  +   D   + 
Sbjct: 128 DVFSREPFVVWFQSPHTAVKDFVIIPLHTTPET--------SVKEIDELVEVYTDVKHRW 179

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           K     F+  GDFN   +Y+         +  +   +    +++              I 
Sbjct: 180 KAEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRI- 236

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             +  Q     ++ +S S   + +    +  + L  SDH P+    
Sbjct: 237 -VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281


>gi|307546855|ref|YP_003899334.1| hypothetical protein HELO_4265 [Halomonas elongata DSM 2581]
 gi|307218879|emb|CBV44149.1| K06896 [Halomonas elongata DSM 2581]
          Length = 273

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/286 (11%), Positives = 84/286 (29%), Gaps = 54/286 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMGS 76
           ++L+++N+    +      +     +             ++ +       D+V LQE+  
Sbjct: 18  LKLLTFNLQVGIQTSAYHHYLTRSWQHLLPHPQRLKRLDMIGEVLSRF--DVVGLQEVDG 75

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +  +    +  +    +              + +     +  N  + + S   +     
Sbjct: 76  GSFRSSRVNQVEYLASRAGFPH-----HFQQLNRNLGQLAQHSNGLLSRLSPQSIEEHSL 130

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R A+          + +   HL               S     +Q  +L + + 
Sbjct: 131 PGPMPGRGAIHARFGDGPDALHLFVAHLAL-------------SHRARVRQLDYLSELVQ 177

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                L   V+ GD N   + L  ++ F K++         P        +  + + +  
Sbjct: 178 ----PLRHVVVMGDLNCTPDQLHAHERFRKSL---------PLHPVRPPLSYPSWQPRRA 224

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D+ ++  +                 D ++      SDH P++ID 
Sbjct: 225 LDHILLSDSLQA--------------DRVEVLEHLFSDHLPVAIDI 256


>gi|237716569|ref|ZP_04547050.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D1]
 gi|229442552|gb|EEO48343.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D1]
          Length = 353

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/343 (11%), Positives = 88/343 (25%), Gaps = 59/343 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++ L    +    +  Q+       +  +N+  L +        +           
Sbjct: 13  MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 72

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           +  +  +    + +    L  D       I+ + E+ +Y  +  +  +            
Sbjct: 73  NTMKYKAKLKNMSEILSMLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQ 129

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H +      +  A     K   +      +     + +    R  +     I G+K+ 
Sbjct: 130 YVHYEGADQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIAGEKMH 188

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  H  S      +             Q + +KD +  +++S    VI GD N      
Sbjct: 189 FIVNHWPSRAAASPVRERAGE-------QVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 240

Query: 219 GNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271
                         + P D    +                    D  V   N        
Sbjct: 241 SMAVALGAKRKPADVGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 300

Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297
            + +   ++  D +  +  +                  SDH P
Sbjct: 301 LKFYKHEIFRRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 343


>gi|119898900|ref|YP_934113.1| endonuclease/exonuclease/phosphatase family protein [Azoarcus sp.
           BH72]
 gi|119671313|emb|CAL95226.1| conserved hypothetical endonuclease/exonuclease/phosphatase family
           protein [Azoarcus sp. BH72]
          Length = 323

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 82/309 (26%), Gaps = 52/309 (16%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74
            ++ + Q + + +WNI                 R+ +    + +       D++ + E+ 
Sbjct: 27  PSSCLDQTINIATWNIREFG----------KKPRSEAAIHYVAEILGQF--DLISVVELR 74

Query: 75  GSYNAVAKVFP--KNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
            +   + +V       W   YS        + +R        A+  +      +     +
Sbjct: 75  ENLGDLKRVLDILGPEWRAVYSGVVPDDGGNGERIGFIFDRRAVGFQGMAAVAVPPRVKV 134

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G      R   R            +  ++  H++                     + + 
Sbjct: 135 GGEYLIQDRFWWRLPYMASFCAGSFEFILIAAHIRWGNGDTD-----------RLAEIEL 183

Query: 191 LKDWIT----QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----- 241
           L  WI      ++ +    ++ GDFN             +        +           
Sbjct: 184 LAQWIDVFRQSEQATTRDLIVVGDFNIPSRRSALFKAITRYGLHVPKALLADTFGSNLAR 243

Query: 242 ----------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                      S    +        +D+     +    L+ E F   L+    +     +
Sbjct: 244 NKRYDQILQYPSEAYPDSFADKGGVLDF-----HVSDALVGELFPPELFPTMTMDKYTYQ 298

Query: 292 LSDHCPISI 300
           LSDH P+ I
Sbjct: 299 LSDHLPLWI 307


>gi|111023203|ref|YP_706175.1| DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1]
 gi|110822733|gb|ABG98017.1| probable DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus
           jostii RHA1]
          Length = 268

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/279 (12%), Positives = 80/279 (28%), Gaps = 55/279 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           +    L ++ +  +AD+V LQE           + P         +           ++ 
Sbjct: 16  AARKGLTEWIERTEADVVCLQETRASDEQLAETLAPALEGGWNLVSAE--------PSSK 67

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +A+  +       ++ +    D F+ AG        +E +   + V  ++L S   
Sbjct: 68  GRNGVAILSRKP---ADAFRVGHGDDEFATAGR------YLEADFDDLTVASLYLPSG-- 116

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------- 219
            ++           +   A++L         +    V+ GD+N     L           
Sbjct: 117 -EAQTPRQEEKERFMDSFARYLTATAAAAVAAGRHVVVCGDWNIAHTELDLKNWKTNKKN 175

Query: 220 ------NNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNK---------IPIDYFVMD 263
                   +        +       ++ +            +           IDY +  
Sbjct: 176 SGFLPNEREWLGALFAEDAHWTDVVRQLNPDVAGPYSWWSYRGKAFDNDSGWRIDYQIAT 235

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   +   Q          +  ++  +R SDH P+++ Y
Sbjct: 236 RELAERAKQA-------VVERAETYDQRWSDHAPVTVQY 267


>gi|117928676|ref|YP_873227.1| exodeoxyribonuclease III [Acidothermus cellulolyticus 11B]
 gi|117649139|gb|ABK53241.1| Exodeoxyribonuclease III [Acidothermus cellulolyticus 11B]
          Length = 282

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 76/318 (23%), Gaps = 77/318 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    L ++   +  D+V LQE          
Sbjct: 1   MRIATWNVN----------------SVVARLPRLHEWLDTVRPDVVCLQETKCAGDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +      +     +A+  +                +   A   
Sbjct: 42  -------FPSEGIIERGYQVAAHGDGRWNGVAILSRIGLEEVTRGFPGQPGYAAPPAAPS 94

Query: 144 RAVELL---------------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
              +                 +      + +  +++ +   LDS    Y        +  
Sbjct: 95  PDSDDALLPAAAAEPVVEARAIGATCGGVRIWSLYVPNGRALDSPHYAYKLEWLAALRT- 153

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDS 233
                     + S  PF++AGDFN         D                  + I     
Sbjct: 154 ---ALAAELARHSGRPFIVAGDFNIAPTDRDVWDPAVFVGSTHVTDAERQALQAICDLGL 210

Query: 234 LIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
              FP+              +         + ID  + +  A                D 
Sbjct: 211 RDIFPRALKYD-YPFTYWDYRAGMFPKNQGMRIDLVLANDAAA-------AKVTDAYVDR 262

Query: 285 IKSRGKRLSDHCPISIDY 302
              +GK  SDH PI +D+
Sbjct: 263 EARKGKGPSDHAPIVVDF 280


>gi|330959493|gb|EGH59753.1| hypothetical protein PMA4326_13159 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 370

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 83/301 (27%), Gaps = 43/301 (14%)

Query: 8   ALVFFLVPCT-ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           AL+      + A++A   R+ +WN   L   +  S    +      D             
Sbjct: 3   ALLVLATGVSGAAIAADARVGTWNTMRLGNGDQKSYLALAAVAANVDVLA---------- 52

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
               +QE+ +   +  +              L +      N         R   V+    
Sbjct: 53  ----VQEVMNDEGIQYLKLALEQRTREKWSSLCSSPVGSRNYKEQYCFLSRDSAVQYEDG 108

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +   L  K  F     R       +   +GK   +  +H+               S +  
Sbjct: 109 AVSFLDRKHVFM----REPYSARFKSLSDGKTFALATVHIIYG-----------KSAADR 153

Query: 185 SQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           + + + L ++    ++     P ++ GDFN   +         + I              
Sbjct: 154 TPELKELGNYWEWLEQVYPGEPIMLMGDFNMPPSDPAFESLRTRAI------PMVTDG-- 205

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHCPISID 301
           +   +N + R     D    +Q+A   +                  G+R  SDH P+   
Sbjct: 206 ASTLSNTSGRFANLYDNVFANQSARSMMSGVGIVNYPLMLKVSHEDGRRAVSDHAPVFFQ 265

Query: 302 Y 302
            
Sbjct: 266 L 266


>gi|296395160|ref|YP_003660044.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985]
 gi|296182307|gb|ADG99213.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985]
          Length = 267

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 69/272 (25%), Gaps = 55/272 (20%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  +     AD V LQE+ +     +          ++  +              + +A+
Sbjct: 23  LLGWLSAAPADYVCLQEVRATEPETRAALAPALADGWTLVQAPA------AQKGRSGVAI 76

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +      +    +G  D       R      +E +  K+ +  ++L S       +  
Sbjct: 77  LSRREPDAVR----IGHGDPQFAESGRY-----IEADFGKLTLASLYLPSGEAQTERQVE 127

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK---------- 226
                +          +++     +    +I GD+N     L   +              
Sbjct: 128 KDQFLTTFG-------EYLKPLAHAKRDVLICGDWNIAHTELDIKNWKGNLKASGFLPHE 180

Query: 227 -------TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270
                    D +                      +           IDY V ++      
Sbjct: 181 RAWIGEVFADGSGWTDVQRAFHPGEAGPYSWWSYRGQAFDNDAGWRIDYHVANKPLAARA 240

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++             +    R SDH PI ++Y
Sbjct: 241 VKA-------VTQRAEHYELRWSDHAPIVVEY 265


>gi|296119006|ref|ZP_06837579.1| exodeoxyribonuclease III [Corynebacterium ammoniagenes DSM 20306]
 gi|295968104|gb|EFG81356.1| exodeoxyribonuclease III [Corynebacterium ammoniagenes DSM 20306]
          Length = 269

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/304 (9%), Positives = 77/304 (25%), Gaps = 67/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ +WNIN                   +            D D++ LQE  +       
Sbjct: 1   MRIATWNIN----------------SVRTRGERALNLMDKHDIDVLCLQETKVADDKFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F    + + +               +    +A+  +       +              
Sbjct: 45  ELFEDAGYHVVFH------------GLNQWNGVAIVSREEPSEVITGFPEQPGYHNDEDK 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +      +    + + +  +++ +   +      Y             L  +   KK  
Sbjct: 93  EQAPEARALGAVIRNVEIWSLYVPNGREITQRHYDYKLDF------LYALARYAEGKKRE 146

Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GDFN                  +        ++ ++         +  +    
Sbjct: 147 K--LLLTGDFNIAPRNEDVWDLELFRGKTHVTEPERAAFQRLEEAGLEEVTRQYTEKDRW 204

Query: 247 ANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              +           + ID+ +  ++  + +            D  +   K  SDH  + 
Sbjct: 205 TYFDYKSMRFQKDEGMRIDFQMATKSLAEKVTGAGL-------DRKERAEKGTSDHLLLW 257

Query: 300 IDYD 303
            D+D
Sbjct: 258 ADFD 261


>gi|21312312|ref|NP_081385.1| deoxyribonuclease-1-like 1 precursor [Mus musculus]
 gi|288541367|ref|NP_001165625.1| deoxyribonuclease-1-like 1 precursor [Mus musculus]
 gi|92090593|sp|Q9D7J6|DNSL1_MOUSE RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X;
           AltName: Full=Deoxyribonuclease I-like 1; Short=DNase
           I-like 1; Flags: Precursor
 gi|12843807|dbj|BAB26122.1| unnamed protein product [Mus musculus]
 gi|23270983|gb|AAH23246.1| Dnase1l1 protein [Mus musculus]
 gi|73921494|gb|AAZ94277.1| DNase X [Mus musculus]
 gi|74213970|dbj|BAE29406.1| unnamed protein product [Mus musculus]
 gi|123228996|emb|CAM24336.1| deoxyribonuclease 1-like 1 [Mus musculus]
 gi|148697888|gb|EDL29835.1| deoxyribonuclease 1-like 1, isoform CRA_c [Mus musculus]
          Length = 314

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 77/303 (25%), Gaps = 33/303 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  V+A +  L+       +  R+ ++N + L+          +     S    L Q  
Sbjct: 19  MRGLVMAPLLILLVGGT---EAFRICAFNAHRLTL---------AKLTKESVMDTLVQIL 66

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI+ LQE+   +     F         S   L +     S          R    
Sbjct: 67  ARC--DIMVLQEVVDSSQNTVPFLLQKLKSSRSYSFLNSSLLGRSTYKEKYVYIYRSDKT 124

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPS 180
           +VL          +       R        +  K +  V+ + L +       E      
Sbjct: 125 QVLN-----FYQYNDTDDIFAREPFVAHFTLPSKTLPSVVLVPLHTTPKDVEKELNALYD 179

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             L   Q                  ++ GDFN     L         +           +
Sbjct: 180 VFLDVYQRWQ-----------NENVILLGDFNADCASLTKKRLKSLLLRTKAGFHWVIPD 228

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +              I   V  Q     L   +  +        +    R+SDH P+ +
Sbjct: 229 GEDTTVRASTNCTYDRI--VVHGQGCQMLLKAAATFDFPKRFQLTEEEALRISDHYPVEV 286

Query: 301 DYD 303
           +  
Sbjct: 287 ELS 289


>gi|255323252|ref|ZP_05364387.1| exodeoxyribonuclease III [Campylobacter showae RM3277]
 gi|255299775|gb|EET79057.1| exodeoxyribonuclease III [Campylobacter showae RM3277]
          Length = 256

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 80/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +                + +    D +  QE+         
Sbjct: 1   MKLISWNVNGLRAVAAKDGF---------------AWLEQQKPDFLGFQEI---KVRESD 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P   + + ++   + +     +    ++ +    K     Q++      +         
Sbjct: 43  VPAEIYKLGFNEISVNS-----AARAGYSGVMSLAKFSSATQKAAFFDDDEGR------- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E     + + +I+  +    D+         +           +I +  +   
Sbjct: 91  -----VLEHRFGNVVLFNIYFPNGQKDDAR-------LAYKMDFYAKFLAYIQELVKQGK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GD N                    L     +   +     +  F   +    +A 
Sbjct: 139 DVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAWLDEVVACGFIDTFRHVRGDAADAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +  +    L            D         SDHCP+ 
Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISSSLKDRLK-----------DAFILSDITGSDHCPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|326436925|gb|EGD82495.1| hypothetical protein PTSG_03143 [Salpingoeca sp. ATCC 50818]
          Length = 548

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 87/324 (26%), Gaps = 65/324 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +++ + +R+ S+NI  ++E +  +               L  + +  D D++  QE+
Sbjct: 241 PHASTLRRPLRIASYNIWNINEFDDGT--------YEERLNRLAAHVRTEDPDVIAFQEV 292

Query: 75  GSYNAVAKVFPKNTW--CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                              ++   +            +   +AV  K   V      L  
Sbjct: 293 RHDALRDSQPASLAALLPTYHYVYQPAMTYAEQVFGRVEEGVAVFSKYPIVGIDYRLLYR 352

Query: 133 AKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            + + + A  R  + + V+      + +   H                +    ++Q   +
Sbjct: 353 NRRNHADAHQRVVLRVNVDAPHLGPVSIFVSHY---------------ALDETARQRGCV 397

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKD 242
           + W   K+++    +  GD N + +              +     +      +       
Sbjct: 398 ETWEFIKEDNSSTQLFLGDLNAEPDTPCIRFLSGKAPLLEATTDGVYDAWLELHPEPRPG 457

Query: 243 SRCNANKNLRNKI------------------------PIDYFVMDQNAYKFLIQESFSEI 278
           S C        +                          IDY +M       +   S    
Sbjct: 458 SNCAKFSGNAWRTADIRKDEERDVGLTFNTFGEQLVKRIDYALMRHPHMD-VTVCSIDVF 516

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
               ++        SDH  + ++ 
Sbjct: 517 PREREEHP-----ASDHLGLVLEL 535


>gi|294673423|ref|YP_003574039.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
 gi|294471767|gb|ADE81156.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
          Length = 358

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/334 (11%), Positives = 86/334 (25%), Gaps = 87/334 (26%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV----------------RLVSWNINTLSEQEGVSLWK 44
           M R +   +    + C    +  +                ++ ++N+     +    + +
Sbjct: 66  MRRFHWAFIPLIAIMCCIPYSGTIYQFGSLDEHADIKPGIKIATYNVAMFGRETSGFIAQ 125

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
           +           +    K    D+   QE    +   K    +++  ++       H   
Sbjct: 126 D-----------ILSEMKKQKVDVACFQEYNDQSGDKK--NSDSYKEYFPYMAQGEHD-- 170

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
                    + +  +   V  ++       +S        A+   V   G  I V + HL
Sbjct: 171 ---------MVIYSRYPIVKSKNMNFEMTNNS--------AMWAEVNYKGTVIRVYNAHL 213

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-------------------TQKKESLVPF 205
           ++     ++          +  ++  L   +                      +    P 
Sbjct: 214 ETTGINGTMYRAGKLMSQGMDIESNALLRALYGNYTIGMIARSGQANVLAQDMRNCERPI 273

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           ++ GDFN        N          D +  F +         +  + K+ IDY      
Sbjct: 274 IVCGDFNDVPYSYVYNTML------GDKVDGFTECGSGFMYTFRGGKKKVRIDYIF---- 323

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                      +  +       R    SDH P+ 
Sbjct: 324 ----------HDKTFLGLSYYKRELSYSDHNPVF 347


>gi|291276452|ref|YP_003516224.1| putative exodeoxyribonuclease [Helicobacter mustelae 12198]
 gi|290963646|emb|CBG39478.1| putative exodeoxyribonuclease [Helicobacter mustelae 12198]
          Length = 250

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 87/306 (28%), Gaps = 82/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWN+N L                         + + +DADI  +QE   +   A  
Sbjct: 1   MRLISWNVNGLRACMNKGFM---------------DFFRQIDADIFCIQESKMHPDQADF 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  ++++     +S                  V VL +  PL    D        
Sbjct: 46  V-FDGYHGYWNSAEKKGYSG-----------------VVVLSKQEPLCVEYDMG------ 81

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKES 201
                 +E + K+  V+      F  ++            L  + QW  D++   +  E 
Sbjct: 82  ------IEHHDKEGRVICAEYPDFYLINVYTPNSKRELERLEYRMQWEDDFLNFLKNLER 135

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P +I GD N                         +   T+  N  +  F         
Sbjct: 136 KKPLIICGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMTTLLENGFIDTFRYFYPDLEG 195

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A                  IDYF+  +   K LI+      +             SDHCP
Sbjct: 196 AYSWWSYMGRARQNNTGWRIDYFLCSEILQKRLIEAKIYSEIL-----------GSDHCP 244

Query: 298 ISIDYD 303
           + +   
Sbjct: 245 VGLVIS 250


>gi|301103630|ref|XP_002900901.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101656|gb|EEY59708.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 443

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/363 (14%), Positives = 98/363 (26%), Gaps = 74/363 (20%)

Query: 14  VPCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +  +    QK+ +V  NI    L+ +        S     +   +L +  + LDAD++ L
Sbjct: 73  LTPSRLSKQKITVVQLNILASNLATRNHFPYVVESSLNWENRKMILLRQLEALDADVLCL 132

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +E+  Y    K    +        +R   H    S    H    +  K  +   + +  +
Sbjct: 133 EELSDYWTFFKPELLDRGYESVYVKRPSIHVSNWSGEKKHDGCGIFYKKDKFELKEFEAV 192

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-------ENTYSPSCSLL 184
              D   R      +++        +    +   +      +       E     S  + 
Sbjct: 193 NYHDPHDRVAVLALLKMRHFAQFVLVGCTHLWWNAKKVDHQMAELYELEEEVLRMSSDVR 252

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------------DDFW 225
            +  + L D +T +    VP V+ GDFN                               +
Sbjct: 253 DKYERELADTVTGQTS--VPIVLCGDFNNSPESPIYEYMENSFMQKPNLEGLSEVFRSAY 310

Query: 226 KTIDPNDSLIRFPK-------------EKDSRCNANKNLRNKIPIDYFVMDQN------- 265
               PN                     +K    +   N R    IDY    ++       
Sbjct: 311 AFYKPNALASALEHSDEELQSLKVEEGKKAEPPHTTVNFRRCWTIDYIWYSKSSLVPSRV 370

Query: 266 --------AYKFLIQESFSEILYNEDDIKSRGKRL----------------SDHCPISID 301
                           ++   L   D +   G+                  SDH PI  +
Sbjct: 371 LEIPPESELRAEDGPGNWFNRLAMSDSLNRSGRLPSSLHGNYNGIPNSVFGSDHVPIMAE 430

Query: 302 YDF 304
           ++F
Sbjct: 431 FEF 433


>gi|210135690|ref|YP_002302129.1| exodeoxyribonuclease III [Helicobacter pylori P12]
 gi|210133658|gb|ACJ08649.1| exodeoxyribonuclease [Helicobacter pylori P12]
          Length = 250

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 80/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +  ++DAD+  +QE    + + + 
Sbjct: 1   MKLISWNVNGLRACMTKGFM---------------DFFNSVDADVFCIQE----SKMQQE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++                 ++ +    K   +        G          R
Sbjct: 42  QNTFEFKGYFDFWNCA-------IKKGYSGVVTFTKKEPLSVN----YGINMEEHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  ++++++  +     S  +          +  + L+           
Sbjct: 91  -----VITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALEL--------KK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   N                       +  +     +  F     ++  A 
Sbjct: 138 PVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKEKAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+        L            D +  +    SDHCP+ 
Sbjct: 198 TWWSYMQQARDKNIGWRIDYFLCSNPLKTCLK-----------DALIYKDILGSDHCPVG 246

Query: 300 IDY 302
           ++ 
Sbjct: 247 LEL 249


>gi|182435048|ref|YP_001822767.1| putative exonuclease [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178463564|dbj|BAG18084.1| putative exonuclease [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 259

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 77/303 (25%), Gaps = 68/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N                  T+    L  + ++   D++ +QE          
Sbjct: 1   MRIATYNVN----------------SITARLPRLLAWLESSGTDVLCVQETKCTAE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   ++   +       +A+  +       +  L    +       R
Sbjct: 41  ------QFPAEALREAGYASAVNATGRWNGVALLSRVGLSDVVTG-LPDGPEYEGVQEPR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + +  +++ +   ++     Y        +  + L+  +       +
Sbjct: 94  A-----ISATCGPLRLWSVYVPNGREVEHAHYAYK------LRWLEALRKAVAADAAKAL 142

Query: 204 PFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANK 249
           PF + GDFN         D                       + L            A  
Sbjct: 143 PFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERAALAALEAEGLSEVHPRPLKYDRAYT 202

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID    +      +            D  + +GK  SDH P+ +
Sbjct: 203 FWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYV-------DREERKGKGASDHAPVVV 255

Query: 301 DYD 303
           D D
Sbjct: 256 DLD 258


>gi|146320518|ref|YP_001200229.1| 3'-exo-deoxyribonuclease [Streptococcus suis 98HAH33]
 gi|145691324|gb|ABP91829.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 98HAH33]
          Length = 276

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 84/307 (27%), Gaps = 57/307 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++L+SWNI++L+        +  + R       +       DADI+ +QE   S     K
Sbjct: 1   MKLISWNIDSLNAALTAESPRALLSR------AVIDTLVTEDADIIAIQETKLSDKGPTK 54

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +     F    +    S  +     +       KN      ++P +GA  +    G 
Sbjct: 55  KHLEILESYFPGICQGPGRSSVEPARTCYAGTLFLYKNHLTPTITFPEIGAPTTMDSEGR 114

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++ +     +V  ++  +                  +     L        +S 
Sbjct: 115 ------IITLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQYADYLAKL--------DSH 160

Query: 203 VPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +  GD+N                   +       +  +        F        NA
Sbjct: 161 KPVLATGDYNVAHKEIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNA 220

Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            IDY+++       + +    +    +           DH P
Sbjct: 221 YTWWAQRSRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQ-----------DHTP 269

Query: 298 ISIDYDF 304
           I ++  F
Sbjct: 270 IVMEISF 276


>gi|3236320|gb|AAC23652.1| DNase gamma [Homo sapiens]
          Length = 305

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 95/291 (32%), Gaps = 34/291 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A  +R+ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N 
Sbjct: 17  SALAMRICSFNVRSFGE---------SKQEDKNAMDVIVKVIKRC--DIILVMEIKDSN- 64

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH------TAIAVRKKNVRVLQQSYPLLGA 133
             ++ P     +  ++ R I ++   S+           A   ++K V V ++SY     
Sbjct: 65  -NRICPILMEKLNRNSRRGITYNYVISSRLGRKTYKEQYAFLYKEKLVSV-KRSYHYHDY 122

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           +D  +   +R    +  +     +    I                 S   + +  +   D
Sbjct: 123 QDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPET--------SVKEIDELVEVYTD 174

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              + K     F+  GDFN   +Y+         +  +   +    +++           
Sbjct: 175 VKHRWKAEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCA 232

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
              I   +  Q     ++ +S S   + +    +  + L  SDH P+    
Sbjct: 233 YDRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281


>gi|327349957|gb|EGE78814.1| DNA lyase Apn2 [Ajellomyces dermatitidis ATCC 18188]
          Length = 642

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/344 (12%), Positives = 79/344 (22%), Gaps = 84/344 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           VRL +WN+N +        W     R    +  +      LDADIV  QE  +   +   
Sbjct: 2   VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALDADIVIFQETKIQKKDLQD 53

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNND-----------IHTAIAVR----KKNV-RVL 124
            +   N W  F+S  +    +S                    T I               
Sbjct: 54  DMVLVNGWDCFFSLPKYKKGYSGVVIYTRNSKCCPIRAEEGITGILYLPASVSPFPSPTS 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-- 182
            +  P       +  A      ++       +   + +   +F  +              
Sbjct: 114 FRDLPEEAQIGGYPTAEQLALSDVDASTLDSEGRCMILEFPAFVLIGVYCPANRDETRDG 173

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--------- 233
             +     L   +          ++ GD N   + + +     +    N +         
Sbjct: 174 FRTGFVNILDARVRNLVAMGKRVIVMGDLNICGSEIDSARALEEIRKGNLTDSEFVSAPV 233

Query: 234 --------------------------LIRFPKEKDSRCNANKNL---------RNKIPID 258
                                     +    K    R                     ID
Sbjct: 234 RRVFNQLVYGGKVIGDRDQGRETPILVDLCRKYHPDRPGMYTCWEQRVNARPGNYGSRID 293

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y + D+    +    +              G   SDHCP+  D 
Sbjct: 294 YVLCDKRMEDWFSASNIQ-----------EGLMGSDHCPVFADL 326


>gi|298376245|ref|ZP_06986201.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298267282|gb|EFI08939.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 304

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 91/331 (27%), Gaps = 55/331 (16%)

Query: 2   IRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           +RK    L    + C A  A       V++ S+NI  L+   G               + 
Sbjct: 1   MRKISEILCCVAILCCALSACSDKQATVKVSSFNI-WLNTLGGKLPP-----------SQ 48

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
             +  +    DIV +QE         ++ ++     +  E   +      N      I  
Sbjct: 49  TAKVIEASQTDIVGIQE-------GHIYEEDGIKHDHVPEIAESLGFHLFNQGEGHYILS 101

Query: 117 RKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           R   V      Y   +   KD F    N     +      +   +  I    + F+D+ E
Sbjct: 102 RYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYI----PYQPYQLNGIPYGDYPFIDTEE 157

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223
                +     ++    +  I Q  +   P  + GDFN                      
Sbjct: 158 EAVRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEPSFLDWTQRAADADIHKIKVE 217

Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQE 273
                 +  I  NDS      ++ S                  +D+ +         + +
Sbjct: 218 WPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILDRLDFVLYSG----CKVTD 273

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           SF                 SDH  ++  ++F
Sbjct: 274 SFITGESEATSDVVVSPYPSDHRMVTSCFNF 304


>gi|168031565|ref|XP_001768291.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680469|gb|EDQ66905.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 614

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/353 (12%), Positives = 95/353 (26%), Gaps = 68/353 (19%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            S +    ++S+N+  +  +  +  S         T     L +      ADI+ LQE+ 
Sbjct: 254 TSSSGTFTVLSYNVLSDLYATSDMYSYCPPWALAWTYRKQNLLREIVAYHADILCLQEVQ 313

Query: 76  SYNAVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           S +      P+   + +   Y  +    ++      D       R +   V +       
Sbjct: 314 SDHYEEFFAPELEKHGYTGVYKKKTGEVYTGSVYVIDGCATFFRRDRFSLVKKYEVEFNK 373

Query: 133 AKDSFSRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDS----------------L 173
           A  S S A     ++     +  +   + V+     +  F DS                 
Sbjct: 374 AAQSLSEALVPTTKKVALSRLLKDNVALIVVLEARDTGGFTDSQGTPGKRGQLLCVANTH 433

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGN------------ 220
            +       +   Q   L   + +    + +P ++AGDFN       +            
Sbjct: 434 IHANQELKDVKLWQVHTLLKGLEKIAASADIPMLVAGDFNSIPGSAPHCLLSTGRVDPTH 493

Query: 221 --------------------------NDDFWKTIDPNDSLIRFPKEKDSRC----NANKN 250
                                        F +      ++ +  ++ D         N  
Sbjct: 494 PDLQVDPLNILRPASKLCHSLSLVSAYASFGRMNGLGPTVEKRMRQMDPTTSEPQFTNCT 553

Query: 251 LRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +DY      +     + E   E    +D      +  SDH  +  ++
Sbjct: 554 RDFLGTLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 606


>gi|33598562|ref|NP_886205.1| putative endonuclease [Bordetella parapertussis 12822]
 gi|33603508|ref|NP_891068.1| putative endonuclease [Bordetella bronchiseptica RB50]
 gi|33574691|emb|CAE39344.1| putative endonuclease [Bordetella parapertussis]
 gi|33577632|emb|CAE34897.1| putative endonuclease [Bordetella bronchiseptica RB50]
          Length = 262

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 91/306 (29%), Gaps = 74/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ S N+N +                 +    L+ +    +AD++ LQE  +   +   
Sbjct: 2   LRITSLNLNGIRS---------------AFRKGLQPWMTAHNADVLCLQEIKVSHDDLTD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +   +       +S           + +R    RV+       G       A 
Sbjct: 47  ELRHPPGYTGHFHHAEKKGYSG--------VGMYLRAGAERVVA------GFDCEEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  + K + V+  +L S    D  +                L   + + +++
Sbjct: 93  GRI-----LRADWKDLSVISAYLPSGSSGDERQQAKYRFLDQFGPWLDGL---MAEHRKT 144

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              FVI GD+N                    L     +   +      +   ++ D R +
Sbjct: 145 GREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEERAWLTEVFDRRGFVDVFRKLDERAD 204

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +      +     S             + +R SDH P
Sbjct: 205 QYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARATSI-----------YKDERFSDHAP 253

Query: 298 ISIDYD 303
           +++DYD
Sbjct: 254 LTVDYD 259


>gi|282877708|ref|ZP_06286523.1| exodeoxyribonuclease III [Prevotella buccalis ATCC 35310]
 gi|281300280|gb|EFA92634.1| exodeoxyribonuclease III [Prevotella buccalis ATCC 35310]
          Length = 249

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 86/303 (28%), Gaps = 79/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                  D+        +LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAC------------VKKDFEA---SFHHLDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           ++   ++  A+  K+  +       +   D   R    
Sbjct: 45  LQFEGYQSYWN----------YADKKGYSGTAIYTKHTPLNVTYGLGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ +++ +                   Q     + ++ Q  +++ 
Sbjct: 91  -----VITMEMDDFFLITVYVPN-------SQDELRRLDYRMQWEDDFRAYVMQ-LDAIK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD N                         +    +  N  +  F      +    
Sbjct: 138 PVIICGDLNVAHEEIDLKNPKTNRRNAGFTDEEREKMTILLNNGFVDTFRHLYPEQV-TY 196

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ +   + L+       +             SDHCP+ 
Sbjct: 197 SWWSYRFRAREKNAGWRIDYFLISERLKERLVDAKIHTEIL-----------GSDHCPVE 245

Query: 300 IDY 302
           ++ 
Sbjct: 246 LEL 248


>gi|56697332|ref|YP_167698.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria
           pomeroyi DSS-3]
 gi|56679069|gb|AAV95735.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria
           pomeroyi DSS-3]
          Length = 233

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 76/283 (26%), Gaps = 55/283 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +Q +RL S+NI      +                  + Q    + A I  LQE       
Sbjct: 3   SQTLRLASYNIQKCVGLD-----------LRRQPRRILQVLDAMGARIAVLQEADKR-LP 50

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +      + +  +  ++++     S      A+  +   +  L  ++  L         
Sbjct: 51  PRPAALPHFVLEEAGWQVVDLGGAGSLGWHGNAVIWKGAGITQLASAHHDLPG------F 104

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R AV +  +     + VL +HL                 +    Q   L   + +   
Sbjct: 105 EPRGAVRVEFDTPIGPLRVLGLHLGLLP-------------ASRRDQIVHLAHDLERLPP 151

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             +P V AGDFN       +       + P    +           +    R    +D  
Sbjct: 152 --MPTVWAGDFN-----EWSRQPVLDHLAPMLRFLPARP-------SFPAPRPLGALDRI 197

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                             + +    +      SDH P+  D  
Sbjct: 198 AHSPELSA----------VAHGVFAERPAPIASDHLPVWADLT 230


>gi|260432325|ref|ZP_05786296.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416153|gb|EEX09412.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157]
          Length = 262

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/308 (9%), Positives = 68/308 (22%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
              L +WNIN                       ++ +  +    D++ LQE  S      
Sbjct: 2   PFTLATWNIN----------------SVRLREPIVLKLLQEESPDVLCLQECKSPVDKIP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F +  +                     +  +A+  +            G   +    
Sbjct: 46  TEGFAELGYTHMI-----------ARGQKGYNGVAILSRLPITDLGDRDFAGLGHARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V   +E       V+  +       D  +   +            ++DW     E
Sbjct: 93  -----VAGQLENG-----VIIHNFYVPAGGDVPDREVNEKFGQKLDYLTDMRDW--FHAE 140

Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRC 245
                ++ GD N         ++    K +                   +   ++     
Sbjct: 141 KPQKSILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVAHLAETQDAGGWVDITRQDIPEG 200

Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +                        ++ SDH
Sbjct: 201 QLYSWWSYRARDWDAANKGRRLDHVWATPDISNAGHSS-------RILRDARGWEKPSDH 253

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 254 APVFATFD 261


>gi|212691340|ref|ZP_03299468.1| hypothetical protein BACDOR_00832 [Bacteroides dorei DSM 17855]
 gi|265751906|ref|ZP_06087699.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212666093|gb|EEB26665.1| hypothetical protein BACDOR_00832 [Bacteroides dorei DSM 17855]
 gi|263236698|gb|EEZ22168.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 353

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 87/311 (27%), Gaps = 78/311 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   +   ++++V++N+++   +                     +     + D++  QE 
Sbjct: 94  PTKYANENRLKIVTYNVHSFGNEITGFS-----------AKEFAEMMNKEETDVLCFQEY 142

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +   +NT+            +   S      + A+  +      Q+       
Sbjct: 143 RGNGDFTEQDLQNTYA----------KTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTN 192

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD----------------------S 172
           +         A+   +++ G  I ++++H+++  F                         
Sbjct: 193 N--------GAIWADLDVKGMTIRIINVHMQTTNFDRMRSKAAQARGAQDEEQERAIYLD 244

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
             + +  +    + QA+ +   I   +    P ++ GDFN         +     +    
Sbjct: 245 YSDNFRENTVRRAGQAEQISSLINATE---YPLIVCGDFNDPPG-TFTYETLKSGLKDG- 299

Query: 233 SLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                  +                  IDY          L    +  I Y+         
Sbjct: 300 ------FQTAGEGYGATYRGFHHLLRIDYLFHS----TLLEGIKYKVIPYD--------- 340

Query: 291 RLSDHCPISID 301
            +SDH P+ ++
Sbjct: 341 -MSDHNPVYLE 350


>gi|148886825|sp|A2Q9L0|CCR4_ASPNC RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|134055362|emb|CAK43916.1| unnamed protein product [Aspergillus niger]
          Length = 656

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/350 (11%), Positives = 99/350 (28%), Gaps = 64/350 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + S  +K+ ++S N    S           + V        L+    ++ D+DI+ LQ
Sbjct: 292 SSSNSPTEKITVLSHNALCDSSATPSHFGYTPSRVLSWEFRRELILSELRSHDSDIICLQ 351

Query: 73  EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           E+     +     ++   +   +++   R +   + ++ +    A   +     +L +  
Sbjct: 352 EIDQGSYNGFFREQLAYNDYKGVYWPRGRAMGMQEEEAKSVDGCATFFKGSKFILLDKQM 411

Query: 129 PLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSL 173
              G             D ++R   +  + +++     + G +  V++ HL    +  + 
Sbjct: 412 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVIFLENRLTGSRFIVVNAHL---YWDPAF 468

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV-------------------PFVIAGDFNRK 214
           ++      ++L ++   L +   +                         P  + GDFN  
Sbjct: 469 KDVKLIQTAILMEEITKLSEKYAKFPPCTDKTAFRFSEAEVEYASGDQIPLFMCGDFNSA 528

Query: 215 INYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNK 254
                 N                  +  +        F  +            N     K
Sbjct: 529 PGSAAYNLVAHGRLTESHPDLEKRLYGNLSRVGMTHPFKLKSAYNSIGELSFTNYTPDFK 588

Query: 255 IPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +DY        +   +     +    +          SDH  +  ++ 
Sbjct: 589 DILDYIWYTSNTLHVSALLGEVDKEYLQKVPGFPNFHFPSDHVALFAEFT 638


>gi|15604519|ref|NP_221037.1| exodeoxyribonuclease III (xthA2) [Rickettsia prowazekii str. Madrid
           E]
 gi|3861213|emb|CAA15113.1| EXODEOXYRIBONUCLEASE III (xthA2) [Rickettsia prowazekii]
 gi|292572307|gb|ADE30222.1| Exodeoxyribonuclease III [Rickettsia prowazekii Rp22]
          Length = 269

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 82/301 (27%), Gaps = 66/301 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +   LLR +    + DI+ LQE+         
Sbjct: 1   MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++    + +         +  +A+  K          +   ++++     R
Sbjct: 41  ------KFPFNELSDLPYHFYVHGQKSYNGVAIISKFP----ADQIIKDFQNNYCNDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ +        ++ ++  +  F+ S             +      ++++ KK    
Sbjct: 91  F-LEIKLSSPIGYSNIISLYAPNGSFVGS------NKFVEKLKFYDNFINYLSTKKSCYE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID-------------PNDSLIRFPKEKDSRCNANKN 250
             +I GDFN     +                         N       +           
Sbjct: 144 KTIIGGDFNIAPFDIDVYSKVLTETTCCTEVEQKKLRTILNSGFEDLYRLMHPDKQEFSW 203

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +         + ID  +   N   +L +          D      K+ SDH PI   
Sbjct: 204 WDYRAGCFEQNKGMRIDMILGCNNTIDYLERCYM-------DYNLRTQKKPSDHIPIIAS 256

Query: 302 Y 302
           +
Sbjct: 257 F 257


>gi|89097572|ref|ZP_01170461.1| Exodeoxyribonuclease III [Bacillus sp. NRRL B-14911]
 gi|89087868|gb|EAR66980.1| Exodeoxyribonuclease III [Bacillus sp. NRRL B-14911]
          Length = 251

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 73/302 (24%), Gaps = 78/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N +                         +    +ADI  +QE          
Sbjct: 1   MKLVSWNVNGIRACVKKGF---------------LDFFMEENADIFCIQESKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++      +S                             G     +    R
Sbjct: 45  LNLDGYHQYWNYAEKKGYSGTAVFTKEKPLYVS--------------YGIAGRETEPEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++L+++  +     +           + +    L+           
Sbjct: 91  S-----LTLEFENFYLLNVYTPNSKRDLARLPYRLEWEDEIREYILELEQ--------KK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +         ++     +  F      +  A 
Sbjct: 138 PVILCGDLNVAHLDIDLKNARSNRGNSGFTDEERGKMTSLLSEGFVDSFRYLYPEQEGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++     + ++                     SDHCPI 
Sbjct: 198 TWWSYMAKVRERNIGWRIDYFIVSDKLKEHILDSKI-----------YCDIMGSDHCPIM 246

Query: 300 ID 301
           ++
Sbjct: 247 LE 248


>gi|327275221|ref|XP_003222372.1| PREDICTED: endonuclease/exonuclease/phosphatase family
           domain-containing protein 1-like isoform 1 [Anolis
           carolinensis]
          Length = 556

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/296 (11%), Positives = 79/296 (26%), Gaps = 37/296 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+   S    V    N   R     TLL    K     ++ +QE+   +A+ K 
Sbjct: 252 LRVATWNLQNCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELVDRDALEKF 302

Query: 84  FPKNTWCIFYSTERLINHSK------------RDSNNDIHTAIAVRKKNVRVLQQ-SYPL 130
             +       +  +                      +  ++           L+  +   
Sbjct: 303 CIELNQPTLPNIRKWKGSRGSWKCVVSENTSSHPQKSVEYSGFLWDTTAGIELKDIASQE 362

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   R           ++    + ++++HL     +         S          
Sbjct: 363 NAQTNGNGRHPYTEPYIAHFKVGMNDLTLVNLHLVPLPSVGDNAVKNHNSHKS-----AA 417

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +   ++      +   +              + KN
Sbjct: 418 FAHTLQETLKGEKDVIILGDFGQAPDCSEHD------VLRKEKFHHLVPVTTFTNISTKN 471

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            +    +D   + ++  K                 I          S HCP+  ++
Sbjct: 472 PQGSKSLDNIWISRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASSHCPVLAEF 527


>gi|326801323|ref|YP_004319142.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326552087|gb|ADZ80472.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 338

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 87/293 (29%), Gaps = 40/293 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAV 80
            +  ++++NI  L         +      T   + + +  + L D DIV +QE  +YN+ 
Sbjct: 71  GEFSVITYNIAGL--------PQLICSAVTERSSSIAEIGRRLNDYDIVHVQEDFNYNSF 122

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                     ++YS       +K          +    K         P      +    
Sbjct: 123 ----------LYYSGNEHPYKTKTKGGVPFGDGLNTLSKYRITEIHRIPWNNCTGA-DCL 171

Query: 141 GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +      +E+  G  I   ++H  +     +                  L ++I +  
Sbjct: 172 TPKGFTFSKIEVGKGVFIDFYNVHANAADDPAAAAARRKN--------MIQLSNYIKEH- 222

Query: 200 ESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----- 252
                 ++ GD N      +    D   +    +  +    K+                 
Sbjct: 223 SGDRAVIVMGDLNAHFCYEHDNIRDLLAQNGLKDAWVTLKAKDSFPAFKKFVKEDILKLT 282

Query: 253 -NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +   ID  +   +A   L   ++       ++    G  LSDHCP+S+ + +
Sbjct: 283 DDCESIDKILFRSSADLLLTPNAYRFENEKFNN--KEGIPLSDHCPVSLSFSW 333


>gi|289423957|ref|ZP_06425750.1| exodeoxyribonuclease III [Peptostreptococcus anaerobius 653-L]
 gi|289155734|gb|EFD04406.1| exodeoxyribonuclease III [Peptostreptococcus anaerobius 653-L]
          Length = 275

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWNI++L+        +  + R       + +   +LD DI+ LQE          
Sbjct: 1   MRLISWNIDSLNAALTSDSARALLSR------EVLKTIIDLDPDIIGLQETKLSVKGLTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          +  S  +     +       K    ++ SYP +GA          
Sbjct: 55  KHIEIIEEMLPDYEYVYRSSVEPARKGYAGTMFLYKKGMNVKVSYPEIGAP--------- 105

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++  G+ I +                                 +++    +   
Sbjct: 106 ----TTMDFEGRIITLELDDCYVTQVYTPNAGDGLRRLEERQVWDCKYMEYLKT-LDEDK 160

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N                   +       +  +     +  F  +      A 
Sbjct: 161 PVLACGDYNVAHNEIDLANPASNHMSPGFTDEERAGFTNLLGAGFVDTFRHKNGMVEGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++ +     +      +    +           DH PI
Sbjct: 221 SWWAQRVKTSKINNTGWRIDYWLVSERVADRVESSIMVDSGPRQ-----------DHTPI 269

Query: 299 SIDYD 303
            +D +
Sbjct: 270 LMDIN 274


>gi|213405473|ref|XP_002173508.1| DNA-(apurinic or apyrimidinic site) lyase [Schizosaccharomyces
           japonicus yFS275]
 gi|212001555|gb|EEB07215.1| DNA-(apurinic or apyrimidinic site) lyase [Schizosaccharomyces
           japonicus yFS275]
          Length = 554

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 89/322 (27%), Gaps = 63/322 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +R+++WN+N +        W++                + LDADI+ +QE+         
Sbjct: 1   MRILTWNVNGIQNPFNYGQWRSKKSYKE--------VFETLDADIICVQELKAQKQGFPE 52

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL--------- 131
           +      +  +++       +S           +  + +         P           
Sbjct: 53  QFALIEGYDAYFTFPLEKKGYSGVGVYVKKSLTVPCKAEEGITGILPVPDRHYCYKDAPE 112

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +  +      +A E L++  G+ I +LD  L     +    N+              L
Sbjct: 113 DEQIGYYPVNLDKATERLIDSEGRCI-LLDFQLFVLIGVYCPVNSGEKRLKFRRLFYNAL 171

Query: 192 KD-WITQKKESLVPFVIAGDFNR------------------KINYLGNNDDFWKTIDPND 232
           +D  I   +E+    ++ GD N                     +   + +     + P+ 
Sbjct: 172 RDRIIRLTQEAKRNVILLGDINILRDELDTADNKDIQKEQFDESIRESREWVRGMLQPHP 231

Query: 233 SLIRFPK-----------EKDSRCNANKNL-RNKIPIDYFVMDQNAYKFLIQESFSEILY 280
             +                       N         IDY  +      ++   +      
Sbjct: 232 EGLLIDTTRHRHPVRRGMFTCWNTRLNTRPTNFGTRIDYICISPALLPWMQDANIM---- 287

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDHCP+ +D+
Sbjct: 288 -------PEIMGSDHCPVFLDF 302


>gi|159487996|ref|XP_001702008.1| protein of endonuclease / exonuclease / phosphatase family
           [Chlamydomonas reinhardtii]
 gi|158271465|gb|EDO97283.1| protein of endonuclease / exonuclease / phosphatase family
           [Chlamydomonas reinhardtii]
          Length = 573

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/369 (11%), Positives = 97/369 (26%), Gaps = 70/369 (18%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           V ++V  + P   S A +  ++++N+  +  ++ +  +               L +    
Sbjct: 201 VRSMVQMVPPSQQSNAGRFTILTYNLLADLYAKADFSNSCPPWCLHWHYRKRNLLRELLA 260

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
             ADI+ LQE+ S + V    P+     + +  +         N       A   +  R 
Sbjct: 261 HKADILCLQEVQSDHYVDFWAPELQRAGYVAIYKKKTTEIYTDNKYAIDGCATFFRRDRF 320

Query: 124 LQQSYPL-------LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL------ 170
                         L   +  +    ++A    +  +   +  +   ++           
Sbjct: 321 SLVKKYEVEFNKAALSLAEGMTNPQQKKAALNRLLKDNVALIAVLEAIEPGTPDAGNRRT 380

Query: 171 -----DSLENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGN---- 220
                ++  +       +   Q   L   + +    + +P ++AGDFN       +    
Sbjct: 381 LICVANTHIHANPELNDVKIWQVHTLLKGLEKIAASADIPMLVAGDFNSVPGSPAHCLLV 440

Query: 221 ------------NDDF----------------------WKTIDPNDSLI----RFPKEKD 242
                       ND                           +  +  L     R   +  
Sbjct: 441 KGKIDSNMMDSANDPLHLLKDQKMSHSLPLSSAVAYLHDAPLSADGRLYKQRQRLDAKHH 500

Query: 243 SRCNANKNLRNKIPIDYFVMD----QNAYKFLIQESFSEILYNEDDI---KSRGKRLSDH 295
                N     K  +DY        Q      +          +D         +  SDH
Sbjct: 501 EPLFTNLTKDFKGTLDYIFYTTTSLQPTAILELPTEVDVATRPDDTTNLSLPNQQYSSDH 560

Query: 296 CPISIDYDF 304
             I  ++ +
Sbjct: 561 LAIMAEFQY 569


>gi|169634777|ref|YP_001708513.1| catabolite repression control protein [Acinetobacter baumannii SDF]
 gi|169794343|ref|YP_001712136.1| catabolite repression control protein [Acinetobacter baumannii AYE]
 gi|260557895|ref|ZP_05830108.1| exodeoxyribonuclease III [Acinetobacter baumannii ATCC 19606]
 gi|169147270|emb|CAM85129.1| catabolite repression control protein [Acinetobacter baumannii AYE]
 gi|169153569|emb|CAP02744.1| catabolite repression control protein [Acinetobacter baumannii]
 gi|260408686|gb|EEX01991.1| exodeoxyribonuclease III [Acinetobacter baumannii ATCC 19606]
          Length = 280

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD+V +QE   ++    +
Sbjct: 20  LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 64

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V  +        DS  R   
Sbjct: 65  KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSIKDGLGFELADSQGRF-- 112

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++     + +  ++L S    +        + +            + Q ++ 
Sbjct: 113 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 162

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD+N     +   +                +   I      +   +   +   
Sbjct: 163 NKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAE 222

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +     +                + +  SDH P
Sbjct: 223 LYSWWSNRGQARAKNVGWRIDYHACSPDWKARTVNAWV-----------YKDQWFSDHAP 271

Query: 298 ISIDY 302
           + IDY
Sbjct: 272 VIIDY 276


>gi|118373801|ref|XP_001020093.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89301860|gb|EAR99848.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 271

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 32/289 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKNLDADIVFLQEMGSYNAVAK 82
             +  WN    S  +          +       +        +ADI+ L+E+      + 
Sbjct: 5   FTISQWNTLADSLSDSFPKCDLQYLKWDYRSQNIKNHLLNEANADIICLEEVDHPVFFSS 64

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +    +F+      +                ++K   +  Q+              +
Sbjct: 65  FLDQTHEIVFHKKPEGEDGQLVAI---------SKQKFQILKHQAIQYKSGDGKKDMNQS 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT---QKK 199
             ++ +L +   K+  +L  HLK+                +   Q + + + I    Q  
Sbjct: 116 YWSLIILDKQIDKQFLLLVTHLKA----------KKQFEDIRLLQVEQILEHIQKIQQDY 165

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--- 256
              +P +IAGDFN +  Y        + I     L    ++K       K          
Sbjct: 166 SKDIPILIAGDFNAEPTYSCI-----QKIKQQGFLKSAYEDKGLTFTTYKVREPNDVQIR 220

Query: 257 -IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            IDY    QN+ + L  ++         +         DH  ++  + F
Sbjct: 221 MIDYIFYTQNSIELLSIKNLPTQDQIGPNGLPNQTFSGDHLSLTATFKF 269


>gi|326927929|ref|XP_003210140.1| PREDICTED: deoxyribonuclease gamma-like [Meleagris gallopavo]
          Length = 286

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 81/303 (26%), Gaps = 51/303 (16%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +L  V F + C    +  +R+ S+N+ +            +          + +      
Sbjct: 1   MLFFVLFSLLCFNP-SLSLRICSFNVRSFGA---------AKIARAEVLDAVVKIISRC- 49

Query: 66  ADIVFLQEMGSYN------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            DI+ L E+           V ++  +        +  +     R S  + + A   R+ 
Sbjct: 50  -DIMLLMEIKENKNRTCPLLVQQLAGQTKGKREEYSCVVSGRLGRKSYKEQY-AFLYRRN 107

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            V V +Q+Y     +     A +R    +  +     +    I         + E     
Sbjct: 108 LVSV-KQTYQYPDTQPGDEDAFSREPFIVWFQSPKTTVEEFAIVPLH----TAPEMAVRE 162

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              L        + W          F+  GDFN   +Y+         +  N   +    
Sbjct: 163 IDELYDVYLDIKQHW------DTKNFIFMGDFNAGCSYVPRKHWKNIRLRTNLEFVWLIS 216

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           + +                         +      +    Y    +      +SDH P+ 
Sbjct: 217 DTNDTT---------------------VRRSTSCPYDRPRYLGVSLPREALGVSDHFPVE 255

Query: 300 IDY 302
            + 
Sbjct: 256 FEL 258


>gi|156398432|ref|XP_001638192.1| predicted protein [Nematostella vectensis]
 gi|156225311|gb|EDO46129.1| predicted protein [Nematostella vectensis]
          Length = 506

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 92/331 (27%), Gaps = 82/331 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +++++WNIN L              R  +    L+ +  +L+AD++  QE   + + + +
Sbjct: 1   MKILTWNINGL--------------RAVTREKKLKDFLNSLEADVMCFQETKITRDMLEE 46

Query: 83  VFPK-NTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-- 138
                + +  F+S  R+   +S   +     T     ++ +     + P +G        
Sbjct: 47  ATCMADGYTAFFSFSRVKSGYSGVATFCKDSTTPLAAEEGLTSQLSASPDIGFYGDDEEF 106

Query: 139 --------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                    +  R  +      +G  + +++++          +           +  + 
Sbjct: 107 TSDQLSRLDSEGRTILTEHTLSSGGTVVIINVYCP------RADMENEDRIQFKLEFHRL 160

Query: 191 LKDWITQKKESLVPFVIAGDFNRKIN-------------YLGNNDDFWKTIDPNDSLIRF 237
           L   +     S    ++ GD N                        +   +  +  L   
Sbjct: 161 LSKRVKALLNSGKHVIVLGDINAAHKPIDHCNPCKYEDFSSFPGRAWLDELLVSLPLPDN 220

Query: 238 PKEKDSRCNA-----------------NKNLR---------NKIPIDYFVMDQNAYKFLI 271
             +   +C +                   N               IDY ++D    +   
Sbjct: 221 SCDSSWKCVSGLLIDSFRYFHPLQREAYTNWSTSTGARQTNYGTRIDYILVDPPLLQQ-- 278

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      D +       SDHCP+    
Sbjct: 279 --------EFVDCVIRPEVEGSDHCPVVCTL 301


>gi|39972661|ref|XP_367721.1| hypothetical protein MGG_07632 [Magnaporthe oryzae 70-15]
 gi|145016845|gb|EDK01275.1| hypothetical protein MGG_07632 [Magnaporthe oryzae 70-15]
          Length = 309

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 79/299 (26%), Gaps = 22/299 (7%)

Query: 14  VPCTASVAQKVRLVSWNINTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI 68
           +    +    +R+ S+NI   +E        K    R       +   A          I
Sbjct: 22  LIPRQAKPLALRVTSFNIRFDAEVSRREKQEKAWSDRKPVLVKTMADIAAKPATAGAPAI 81

Query: 69  VFLQEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
             LQE+ S      K      W                S    +T     K    V   +
Sbjct: 82  FGLQEVLSNQLSDIKKGMGAGWDHIGVAREDGKSKGEFSPIIYNT-----KDLKVVTSAT 136

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             L    D  S+A    +  ++     + +      L +   LD++      +   +   
Sbjct: 137 KWLTETPDKPSKAAGAGSSRIVTLAVFEHVATKKRFLHANTHLDNVSPEARIAG--IKVA 194

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              ++D +  +    +P  + GDFN                  +   +    ++      
Sbjct: 195 VTQIQDMLKAQ-GGKLPVSLTGDFNSVAGGDAAKALADMNFVKDVHDVATKAQRSGEELT 253

Query: 248 NKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    +  ID+  +  NA        ++   Y           +SDH  +  D  
Sbjct: 254 YTAFEQGAGRGRIDFVWIGPNA-----DAPYTVQKYEVRANFVDNLFMSDHRAVVADIT 307


>gi|148547712|ref|YP_001267814.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida F1]
 gi|148511770|gb|ABQ78630.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida F1]
          Length = 257

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 80/286 (27%), Gaps = 56/286 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79
           + +++ N++                        LR+  +   AD+VFLQE+      +  
Sbjct: 21  LNVLTLNVHKGFTFFNRRF----------ILPELREAVRATGADLVFLQEVHGSHQQHAL 70

Query: 80  VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +P+     F +        + +           A+  K       +  +    +  
Sbjct: 71  RHPAWPETPQYEFLADSMWPQFAYGRNAVYPHGDHGNALLSKFPISRFNNLDVSVQGN-- 128

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  +   +E+ G    V  + +                 +   +Q + + D +  
Sbjct: 129 ---EQRGLLHCQLEVPGHD-EVHAVCVHLGLR-----------EAHRQRQVKLMLDLLAS 173

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P +IAGDFN            W+            +   +   +       + +
Sbjct: 174 -LPPNAPVIIAGDFND-----------WRLKADAVLSEHLTEAFGTPARSFPARLPLLRL 221

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +        +  +   +       K     LSDH P++ + +
Sbjct: 222 DRIYLRNA-----VPGAAQVLS------KYPWSHLSDHVPLAAEIN 256


>gi|257066091|ref|YP_003152347.1| exodeoxyribonuclease III Xth [Anaerococcus prevotii DSM 20548]
 gi|256797971|gb|ACV28626.1| exodeoxyribonuclease III Xth [Anaerococcus prevotii DSM 20548]
          Length = 274

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 85/304 (27%), Gaps = 56/304 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++L+        +  + R       +    KN + D++ LQE          
Sbjct: 1   MKFISWNIDSLNAALTSDSKRAVMSRD------VLLTIKNENPDVIALQETKLPANGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   F+     +  S R      +       K    +++S+P +GA D+    G  
Sbjct: 55  KHVEKLSEFFPDYDYVWISSRPGARKSYAGTMTLYKKGLDVKESFPEIGAPDTMDLEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +   ++  +                L +     L        +   
Sbjct: 114 -----ILTLEFEDFYFTQVYTPNAGGELKRLPLREEWDKLYADYLAEL--------DKNK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                           +  +        F     +   A 
Sbjct: 161 PVIATGDFNVAHEEIDLAHPENNHMSAGFTDEERRGFTNLLNRGFTDTFRHLNKNLEGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++     + +I  +  +    +           DH PI
Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFLVSDRLMEDVIDSTIIDSGDRQ-----------DHTPI 269

Query: 299 SIDY 302
            ++ 
Sbjct: 270 MLEI 273


>gi|116628715|ref|YP_813887.1| exonuclease III [Lactobacillus gasseri ATCC 33323]
 gi|282852356|ref|ZP_06261698.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1]
 gi|311111551|ref|ZP_07712948.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22]
 gi|116094297|gb|ABJ59449.1| Exonuclease III [Lactobacillus gasseri ATCC 33323]
 gi|282556098|gb|EFB61718.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1]
 gi|311066705|gb|EFQ47045.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22]
          Length = 275

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWNI++L+        +  + R       +    K  D DI+ +QE    +     
Sbjct: 1   MRLISWNIDSLNAALTSDSARAKLTRG------VLNTIKEKDPDIIAIQETKLRSTGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +     +  S  +     +       KN    + + P++GA +     G  
Sbjct: 55  KHQEILAEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLAPEVTKPVIGAPEPMDHEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +        +         ++  Q L            
Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQ--------NK 160

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GD+N                   +       +  +        F K   +     
Sbjct: 161 PVIASGDYNVAHTPIDLKHPESNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +    +           DHCPI
Sbjct: 221 SWWAQRVRTSKANNSGWRIDYYIVSNRIADQVTKSEMLDTGERK-----------DHCPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 MLEIN 274


>gi|262283107|ref|ZP_06060874.1| exodeoxyribonuclease III [Streptococcus sp. 2_1_36FAA]
 gi|262261359|gb|EEY80058.1| exodeoxyribonuclease III [Streptococcus sp. 2_1_36FAA]
          Length = 275

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAEDADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILANLFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDVEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +        +      +  ++    L            
Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATLDQ--------QK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|169620123|ref|XP_001803473.1| hypothetical protein SNOG_13263 [Phaeosphaeria nodorum SN15]
 gi|160703966|gb|EAT79147.2| hypothetical protein SNOG_13263 [Phaeosphaeria nodorum SN15]
          Length = 605

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 87/326 (26%), Gaps = 69/326 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78
           + + + ++N+  L+                     +  Y ++   DI+F+QE+   N   
Sbjct: 290 EGITIGAYNVENLAANSSH---------HPLLAGHIVDYLRS--PDIIFIQEVQDDNGPT 338

Query: 79  ---------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
                          A  +      +  F     + +        +I TA   +   +R+
Sbjct: 339 NDAVVSANLTLSTLSAAIRAAGGPQY-SFTDVVPVDDQDGGQPGGNIRTAYLYKPSLIRL 397

Query: 124 ------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEI--------NGKKI 157
                               +  P      + +   +R+ +    E+             
Sbjct: 398 YKPNPGGSLDANEVLDGPTLKYNPGRIDPANEAWTASRKPLVAQWEVISSKSSNRKEDTF 457

Query: 158 WVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDF 211
           + +++H  S     SL     P           Q+    +++     K+     + AGDF
Sbjct: 458 FTVNVHFGSKGGSSSLHGDARPPVNGGVQDRIDQSVITANFVKNILSKDKNARVITAGDF 517

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N               I          K  +          N   +D+  +  +  K + 
Sbjct: 518 NEFTFVEPLKQYVQ--ISGLRDADAADKIDELERYTYLFDMNAQQLDHMFVSDSVAKKIK 575

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCP 297
            E         +       ++SDH P
Sbjct: 576 YEHVHV-----NTWPEFAAQVSDHDP 596


>gi|78046333|ref|YP_362508.1| hypothetical protein XCV0777 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325928431|ref|ZP_08189622.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
 gi|78034763|emb|CAJ22408.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325541148|gb|EGD12699.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
          Length = 255

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 86/295 (29%), Gaps = 60/295 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70
           AS ++ +R+++ NI   S     S +               +    + +       DIV 
Sbjct: 3   ASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGER--DIVG 60

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           LQE    +  +    +  +    +     +H   R       +A  +  K   V  Q + 
Sbjct: 61  LQEADPGSLRSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHA 120

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L G      R G R  +          + V   HL                 +    Q  
Sbjct: 121 LPG------RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLA 161

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247
           ++ + ++    +    ++ GDFN   +                 L R  + +   C  + 
Sbjct: 162 FIAELLSDHPNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCEVHT 206

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + R    ID+ ++  +                 +  ++     SDH  + +D 
Sbjct: 207 FPSWRPDRAIDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 247


>gi|325186273|emb|CCA20779.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 279

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/295 (10%), Positives = 85/295 (28%), Gaps = 34/295 (11%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +  ++      A +  ++S+N+ T +  +    W +           L+ + +  + D +
Sbjct: 6   LLLILSAPTLTALEFSVISYNVRTSNAPDVSYPWTDRK-------QQLQPFIEAENPDFI 58

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSY 128
             QE            +        T  +      +   +    +  +  +   +   S+
Sbjct: 59  GTQEASPEQF------EFFQQALGDTYGITGECAGECYENERPFLMYKKSEWNSLEFGSF 112

Query: 129 PL-LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            L +   ++++    R       +     I +   +         LE++           
Sbjct: 113 ALEIRGSNTWNLEYKRSVSWQRFQHKSNSISICLFNTHFDMTKGHLESS----------- 161

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + +    ++  +S   F++ GD N  +     +      +        +          
Sbjct: 162 -KLIVQERSKICKSFDFFILTGDLNANLQDDAIHYLKGIPLISTLQQCGYQGGTFIGPGV 220

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +    DY  +  N    +I  S         D +  G+ ++DH  +   +
Sbjct: 221 FTGPLSSAVFDYIFIQPNENIRIIGSSII-------DSRRNGQAITDHAIVKTTF 268


>gi|298253361|ref|ZP_06977153.1| exonuclease III [Gardnerella vaginalis 5-1]
 gi|297532756|gb|EFH71642.1| exonuclease III [Gardnerella vaginalis 5-1]
          Length = 288

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 76/285 (26%), Gaps = 45/285 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN--- 108
           ++   +  ++     D+  +QE+ +               + ++E ++N  K D+     
Sbjct: 15  AERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSENIVNSIKNDNFTYTN 74

Query: 109 -----DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                     +A+      V ++      ++D  S    R     +    G +I +  ++
Sbjct: 75  EVCRVKGRAGVALVTSLPVVEKRYGLPGLSEDVDS---GRWVETDVRTPEGYEITIASVY 131

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------ 217
           + +    D            L      L +            ++ GDFN           
Sbjct: 132 VHAGNVDD--PQKMQQKFRFLDTMLIRLGELRNIAASGGNQAILCGDFNIAHTSLDIKNA 189

Query: 218 ----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPID 258
                             + I+  + +                   +           +D
Sbjct: 190 KANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAFDNNVGWRLD 249

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y        +           +  D  +S   R SDH P+SI YD
Sbjct: 250 YQFATPEIAESARG-------FVIDRAESYDARWSDHAPLSIKYD 287


>gi|148980013|ref|ZP_01815834.1| putative phospholipase C precursor [Vibrionales bacterium SWAT-3]
 gi|145961456|gb|EDK26760.1| putative phospholipase C precursor [Vibrionales bacterium SWAT-3]
          Length = 450

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 81/289 (28%), Gaps = 32/289 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + S+N+  L         + S+   +               D++ LQE  S +    +
Sbjct: 182 LNVASYNLWLLPSVSSNIAGRASIMNHSL-----------SGFDVLALQEAFSTD--RDI 228

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   +     ++        +        R   +      +      D ++     
Sbjct: 229 LFNKLADEYPYRTEVVGGKSNALYDGGVVTF-SRHPIIETDSIVFEHCTGTDCYADK--- 284

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V   +  +G+   + + HL SF    +          + +         +T+   +  
Sbjct: 285 GVVYTKINKDGEIYHIFNTHLASFNTPSAKRLRRLQLGLMRTF-------MLTKGIPANE 337

Query: 204 PFVIAGDFNRKINYLG-NNDDFWKTID-PNDSLIRFPKEKDSRC-NANKNLRNK-----I 255
             + AGDFN   N           T+D        + +       N     +        
Sbjct: 338 AVIYAGDFNIDKNSDFLEYLLMLATLDVDPPEFRGYTRATFDPTINPYAAYKYSGGADVE 397

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +DY  + +   + +   +  ++    +        LSDH  I  ++ F
Sbjct: 398 YLDYVFVSRVHRRAVNNTNTVKLNQRLNSETWGSWHLSDHFAIDANFVF 446


>gi|322797021|gb|EFZ19335.1| hypothetical protein SINV_07629 [Solenopsis invicta]
          Length = 388

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 80/285 (28%), Gaps = 29/285 (10%)

Query: 33  TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92
            L       +   S  R  +  + +     +++ DI+ LQE+ S +    +  K      
Sbjct: 1   MLFPFPSRGIPYVSRDRC-ARISAIADKCASMEYDIICLQEVWSVDDFKLIKAK------ 53

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRRAVE 147
              + ++ +S    +    + I +  +        +                 G +    
Sbjct: 54  --AQEVLPYSHYFHSGVFGSGICILSRYPIQDVMFHKWPLNGYVHKIHHGDWFGGKGVGL 111

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
             ++I    + V   HL +        +      +    QA     ++          ++
Sbjct: 112 CKIKILNMNVNVYITHLHA-----EYNHENDEYMAHRVLQAFDTAQFVKMTSGGADAIIL 166

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--------PIDY 259
           AGD N +   L        +   +           + C  N    +K+         ID+
Sbjct: 167 AGDLNTEPQDLAYKIIQGVSGLVDTCPNSASHIGTNECANNSYTSSKLAQTKPDGKRIDH 226

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +   +    +   +F       + +  +    SDH  +     F
Sbjct: 227 IMYLGSKTVKVEVTNFQHPWL--NRVPYKNFSYSDHEAVMATLKF 269


>gi|319900799|ref|YP_004160527.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319415830|gb|ADV42941.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 366

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 89/334 (26%), Gaps = 77/334 (23%)

Query: 3   RKYVLALVFFLVPCTASVA-------------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           +  +L L+ FL+  +                 +  +L+S+NI                  
Sbjct: 68  KSALLPLIGFLLCYSQIRTYLPINFHTDNLPEESFKLLSYNIMGFDGATKKDGGNP---- 123

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  +  Y K   ADI+ LQE  +  +   +  K+             +    S   
Sbjct: 124 -------ILTYLKESGADILCLQEYVTIESSRHLSQKDVSHELRDYPYHRINI-VGSGKG 175

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               IA   K   +  +                  +V   V+I    + +++ HL+S   
Sbjct: 176 YTNQIACYSKYPILSARRLNYSS--------EYNGSVIYEVKIGEDTVTLINNHLESNKL 227

Query: 170 LDSL-----------------------ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
             +                            + + ++ + QA  + + I     +    +
Sbjct: 228 TKADKVVYEDMLKSPEKDKVKSGIRLLIRKLAEASAIRAPQADTIANEIA--SSAHPYII 285

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GDFN       +                F +       +    +    ID  +  +N 
Sbjct: 286 VCGDFNDTPISYTHRTIAQNM------DDAFTQSGRGLGISYNQNKFYFRIDNILTSKNL 339

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +             +    R  + SDH PI  
Sbjct: 340 KAY-------------NCTVDRSIKESDHYPIWC 360


>gi|162329921|pdb|2O3C|A Chain A, Crystal Structure Of Zebrafish Ape
 gi|162329922|pdb|2O3C|B Chain B, Crystal Structure Of Zebrafish Ape
 gi|162329923|pdb|2O3C|C Chain C, Crystal Structure Of Zebrafish Ape
          Length = 282

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 73/304 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ SWN++ L      +                  + +  D DI+ LQE       
Sbjct: 24  AANMKITSWNVDGLRAWVKKNG---------------LDWVRKEDPDILCLQE---TKCA 65

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K  P +   +    E    +     + + ++ +A+  K   +        G        
Sbjct: 66  EKALPADITAM---PEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVT----YGIGKEEHDK 118

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     ++       +++  ++ +        +               L        +
Sbjct: 119 EGR-----VITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGL--------D 165

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +  P V+ GD N                         + +  +        F +    + 
Sbjct: 166 ARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQA 225

Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            A                  +DYFV+       L                      SDHC
Sbjct: 226 YAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNT-----------AMGSDHC 274

Query: 297 PISI 300
           PI++
Sbjct: 275 PITL 278


>gi|67459413|ref|YP_247037.1| exodeoxyribonuclease III [Rickettsia felis URRWXCal2]
 gi|67004946|gb|AAY61872.1| Exodeoxyribonuclease III [Rickettsia felis URRWXCal2]
          Length = 267

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 72/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+ A     DI+ LQE    +++   
Sbjct: 1   MKIVTWNINSL----------------RLRIDLLRKLAHEHQPDIILLQETKVDDSL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       S    +  +A+  K       S  L  +         R
Sbjct: 42  ------FPLEVIKNIGYEHVTYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +I     +V           D  +   +       +  + +++W+T  +    
Sbjct: 89  HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNLKFKHKLEYVRLMQEWLTTNRTKND 141

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N                   +         +  +    +             
Sbjct: 142 KIIIVGDLNIAPLEHDVWSSKQLRNVISHTDIERSLLVELQNSLGFIDSSRHFVPFDEKF 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L          +           SDH P
Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKDAL-------FSIHLLSEARDWSPPSDHVP 254

Query: 298 ISIDY 302
             +  
Sbjct: 255 YFVTL 259


>gi|183221215|ref|YP_001839211.1| exodeoxyribonuclease [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911306|ref|YP_001962861.1| exodeoxyribonuclease III [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775982|gb|ABZ94283.1| Exodeoxyribonuclease III [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779637|gb|ABZ97935.1| Exodeoxyribonuclease [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 256

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 79/274 (28%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + ++ + DI+  QE          + F    + +++S      +S         TA+
Sbjct: 19  LLDFIRHENPDILCFQETKAPGKEIDREEFRHLGYEVYFSLAEKPGYSG--------TAV 70

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
             ++K  +V       +G  D   R+  R        +  +  ++ +++  S    +  +
Sbjct: 71  LTKQKPKQVT------IGFGDGIFRSEGRSVF-----LEFQDFYLWNLYFPSGTSGEERQ 119

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--- 231
                   +  Q      +      +   P +I GD N     +  ++      +     
Sbjct: 120 -------KVKYQFLDEFTELTKPFLKKKKPLLICGDVNIAHTEMDIHNPKGNQNNSGFLP 172

Query: 232 ------------DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270
                            F        +       +           IDYF + ++    L
Sbjct: 173 AERKWFTDFLELGFFDCFRTIHPDVLDEYSWWTYRFQARKNNKGWRIDYFFVTKSKSVRL 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                           ++   +SDH P+ ++  F
Sbjct: 233 QTAKI-----------AKEPVMSDHAPVVLEIQF 255


>gi|67458642|ref|YP_246266.1| exodeoxyribonuclease III [Rickettsia felis URRWXCal2]
 gi|67004175|gb|AAY61101.1| Exodeoxyribonuclease III [Rickettsia felis URRWXCal2]
          Length = 260

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 87/303 (28%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +   LLR +    + DI+ LQE+         
Sbjct: 1   MKIATWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    +++     R
Sbjct: 41  ------KFPFDELSDLPYNFYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + +      ++ ++  +  F+ S +     +            ++++ KK    
Sbjct: 91  F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN     +                      +TI  +     +     S+    
Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKALAETTCFTEIEQKKLRTILNSGFEDLYRLRHPSKQE-F 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L            D      ++ SDH P+ 
Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255

Query: 300 IDY 302
             +
Sbjct: 256 ASF 258


>gi|321260765|ref|XP_003195102.1| component of the CCR4-NOT transcriptional complex; Ccr4p
           [Cryptococcus gattii WM276]
 gi|317461575|gb|ADV23315.1| Component of the CCR4-NOT transcriptional complex, putative; Ccr4p
           [Cryptococcus gattii WM276]
          Length = 745

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 92/351 (26%), Gaps = 66/351 (18%)

Query: 15  PCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             T+   +   ++++NI     +     S   +          LL +      AD+V LQ
Sbjct: 381 TPTSGKQESFSVLTYNILCASFAPATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQ 440

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSY 128
           E+         +P      +       + +K  S ++       A   +++  R+++   
Sbjct: 441 EIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSADEQKLVDGCATFWKEEKFRLVETQV 500

Query: 129 PLLG----------AKDSFSRAGNRRAVELL----VEINGKKIWVLDIHLKSFCFLDSLE 174
                          +D F+R  +R  + ++       +G ++ V +       +     
Sbjct: 501 IEFNQLALQKTDMRTEDMFNRVMSRDNIAVVAALEFRTSGGRLLVANS---HIYWDHRYR 557

Query: 175 NTYSPSCSLLSQQAQWLKD----------------------WITQKKESLVPFVIAGDFN 212
           +       +L ++ + + +                      +   +K   +P ++  D N
Sbjct: 558 DVKLVQIGMLMEELEKIVEQFSKYPVKLDTDPEYNNGKPPKYERSEKGRDIPLIMCVDLN 617

Query: 213 RKINYLGNN--------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                   +                          +  +  L             N    
Sbjct: 618 SFSGSAVYDYLSSGSIPGDHEDFMSHLYGRYTASGLKHHLGLRSACAGIGEMKMTNFTPT 677

Query: 253 NKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               IDY            +     +   ++          SDH P+   +
Sbjct: 678 FAAAIDYVFYTPRTMKVTSVLGDVDKAYLDKTVGFPNAHFPSDHIPVFTQF 728


>gi|169837263|ref|ZP_02870451.1| exonuclease III [candidate division TM7 single-cell isolate TM7a]
          Length = 267

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 71/305 (23%), Gaps = 64/305 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +RL SWN+N +        +                +      DI+ LQE  +     +
Sbjct: 2   DMRLYSWNVNGIRAVIKKGTFLP--------------FISEYQPDILCLQETKAKKNQVE 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     +   +++     +S     +               + + Y L            
Sbjct: 48  I-DLPDYFEIWNSAERAGYSGTAIFSKAKPLNTWL-DFPEDIVKKYNLDQDDYGNPNNEG 105

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSL-ENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R  +    +       V  ++  +     S  +  +        +  + L+         
Sbjct: 106 R-IIAAEFDN----FIVATVYTPNSKGDLSRLQLRHQKWDKAWLEYMKKLESI------- 153

Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P +  GD N                           +     +     F         
Sbjct: 154 -KPVLFCGDLNVAHTEDDLANPKPNIGKHGFTNEERAGFDAFIQSGFKDTFRIFTKGNGY 212

Query: 247 ANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +                IDY++  +     + +                    SDHCP+
Sbjct: 213 YSWWTHWANARARNIGWRIDYWLASEKLANKITEAQIH-----------PDIMGSDHCPV 261

Query: 299 SIDYD 303
           S+  D
Sbjct: 262 SVTID 266


>gi|167034651|ref|YP_001669882.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1]
 gi|166861139|gb|ABY99546.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1]
          Length = 264

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 89/297 (29%), Gaps = 52/297 (17%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F     A   +++R+++ N +                        LR+  ++  ADIVFL
Sbjct: 10  FASINQAPAVKRLRVLTVNTHKGFTAFNRRF----------ILPELREAVRSTQADIVFL 59

Query: 72  QEM----GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQ 125
           QE+      + A    +P+ +   F +     +  + +     D H   A+  K   +  
Sbjct: 60  QEVLGSHDRHAARYPGWPQTSQYEFLADSMWSDFAYGRNAVYPDGHHGNALLSKYPIIEH 119

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           ++  +            R  +  ++++ G+ ++  + +HL         +          
Sbjct: 120 RNLDVSITG-----PERRGLLHCVLDVPGQGQVHAICVHLSLLESHRQKQLQLLRKLL-- 172

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                           +  P +IAGDFN    +        + +        F +     
Sbjct: 173 ------------DALPADAPVIIAGDFNDWKTHGNRTLGLQRDLHE-----AFERHHGHL 215

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     + +D   +               + +           LSDH P++++
Sbjct: 216 ARTYPARLPLLRLDRIYLRNA-----ESHGPRILGHK------PWSHLSDHLPLAVE 261


>gi|330808554|ref|YP_004353016.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376662|gb|AEA68012.1| Putative exodeoxyribonuclease III [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 264

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 91/305 (29%), Gaps = 72/305 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R+ ++NIN                   +    L ++ +    DI  LQE+    AV 
Sbjct: 2   KNLRIATFNING----------------IRARLPNLLEWLEREKPDIACLQEL---KAVD 42

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K FP        +    + +            +A+  ++ + L+    L G  D      
Sbjct: 43  KDFPA-------AELESVGYGAIWHGQASWNGVAILARDAQPLESRRGLPGGDDDNHSRY 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV  ++        V  ++L +       +  Y  +        + L D+    + S
Sbjct: 96  LEAAVHGVL--------VGCLYLPNGNPQPGPKFDYKLA------WFERLIDYAQGLQAS 141

Query: 202 LVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRC 245
             P V+AGD+N     +   +                 + + +D   +        D R 
Sbjct: 142 DHPVVLAGDYNVVPTDMDIYNPRSWLKDALLQPESRACYLRLLDQGWTDSLRHLYPDERI 201

Query: 246 NANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                   +          ID+ +++  A  +L +          D         SDH P
Sbjct: 202 YTF-WDYFRQHWQKNSGLRIDHLLLNPAASAYLSEAGV-------DAWVRNQPHPSDHAP 253

Query: 298 ISIDY 302
             I  
Sbjct: 254 TWIRL 258


>gi|322699478|gb|EFY91239.1| endonuclease/exonuclease/phosphatase family protein [Metarhizium
           acridum CQMa 102]
          Length = 605

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/334 (11%), Positives = 86/334 (25%), Gaps = 64/334 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEM 74
            +++    + +  +N   L+              +T   +++ Q    L   D++FLQE+
Sbjct: 289 TSSAHCSGLTVADYNAENLAPN------------STHLPSVVSQIVTKLRTPDLIFLQEV 336

Query: 75  GSYNA-VAKVFPKNT----------------WCIFYSTERLINHSKRDSNNDIHTAIAVR 117
              +  V                           F     +          +I  A   R
Sbjct: 337 QDNSGPVDDGVTSANLTLSTLTQGIEKTSGVRYDFVEVAPVDGQDGGQPGGNIRCAYLYR 396

Query: 118 KKNVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELLVEI---NGKK 156
              V +                    +  P    +   +    R+ +  + +      K 
Sbjct: 397 PDTVELYKPNPGGSNDENAVVDGPSIKYNPGRIGQSDANFEATRKPLVAMWKPVKRPDKV 456

Query: 157 IWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGD 210
            + +++H  S      L               + Q +   ++I Q    +     + AGD
Sbjct: 457 FFTINVHFSSKGGSTGLHGDPRPPVNKGVEKRTGQMELTANFIAQILARDPKARIITAGD 516

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN            + +              +         +N   +D+  + +      
Sbjct: 517 FNEFTQVQPV--ATFASKSGLLDADEAAGLAEVERYTYLFDQNSEALDHMYISKGL---- 570

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     + +  ++   + SDH P     +F
Sbjct: 571 -ARHAQVEHLHLNTWQNYDGQTSDHDPSVAKLNF 603


>gi|284030306|ref|YP_003380237.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283809599|gb|ADB31438.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 329

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 83/294 (28%), Gaps = 71/294 (24%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L+P        +R++S N++  +                 D     Q     DAD++ L
Sbjct: 104 LLIPGKGGGPYDLRVLSHNVDAANP----------------DPARTAQQLLAADADVMAL 147

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +E+ S            +   ++            +      +A+  K       S  + 
Sbjct: 148 EEITS-------ADLKVYKKQFAAT--------YPHVVTRGTVALWSKFPVEESASVDV- 191

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                   A  R A+   V     K+     HL S     S   +   + +      + L
Sbjct: 192 ------GFAWTR-ALRAEVSTPEGKVAFYVAHLASVRIGTSGFTSNQRNET-----IKQL 239

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              I  +K +    V+ GDFN   N         +++ P  + +R  +    +       
Sbjct: 240 GQQIAGEKLAG--VVVMGDFNGTAND--------RSLAPVTAGLRSAQGAAGQGFGFTWP 289

Query: 252 R--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  ID+ ++       +       +              SDH P+  +  
Sbjct: 290 AKFPMARIDHIMVRG-----VTPTKAWVM----------DPTGSDHRPVVAELT 328


>gi|227506363|ref|ZP_03936412.1| endonuclease/exonuclease/phosphatase [Corynebacterium striatum ATCC
           6940]
 gi|227197014|gb|EEI77062.1| endonuclease/exonuclease/phosphatase [Corynebacterium striatum ATCC
           6940]
          Length = 940

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/336 (9%), Positives = 99/336 (29%), Gaps = 61/336 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNS---------------------VKRTTSDYTLLRQY 60
            +  + ++N+       G     +S                      +   +    +   
Sbjct: 530 GEYTIGAFNVLNYFTSLGEEYGGSSYDDMDGNPVTVKRGTTRGAYTAEAFENQQRKIVAA 589

Query: 61  AKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSN-- 107
              LDAD++ L E+               A+A +  +            +   ++  +  
Sbjct: 590 VNGLDADVIALSEIEDGYGVTGDKSKRDQALAHLTDELNAAAGSEKWAYVASPEKLPDTV 649

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKS 166
           + I TA   +++ V+ + +S   +  + + +           V+  + +    +  H KS
Sbjct: 650 DVIRTAFIYKRERVKPVGESRIFVDDRFTGTAREPLAQEFAPVDAADDETFVAVANHFKS 709

Query: 167 FC----FLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNN 221
                       +    + ++   QA+ + + + ++ +       + GD N   +    +
Sbjct: 710 KGSVVKGDADTGDGQGNNPNVRKAQAEAVLEHLAKQPDWQDKATFVMGDLNTYTHGDAID 769

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                 +  +       ++  +   + +       +D+ + ++     +       I  +
Sbjct: 770 ------VFRDSGYTVPAEDYHADA-SYQFSGLLGSLDHVLANEVVSGKVTDAQVWNINAD 822

Query: 282 EDDIKSRGKR--------------LSDHCPISIDYD 303
           E       +R               SDH P+ + + 
Sbjct: 823 EPVAFEYSRRNYNIVDFYDDSPFRASDHDPVKVGFS 858


>gi|326927917|ref|XP_003210134.1| PREDICTED: 2',5'-phosphodiesterase 12-like, partial [Meleagris
           gallopavo]
          Length = 321

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/318 (11%), Positives = 75/318 (23%), Gaps = 35/318 (11%)

Query: 22  QKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             VR VS+NI          S                    LL++     +AD+V LQE+
Sbjct: 3   GSVRAVSYNILADAYAQTEFSRTVLYPYCAPYALEVDYRQNLLKKELAGYNADLVCLQEV 62

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGA 133
                   + P           ++                 ++  ++     ++      
Sbjct: 63  DKSVFADSLAPALDAFGLEGLFKIKEKQHEGLATFYRRDKFSLLSQHDITFSEALLSEPP 122

Query: 134 KDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLLSQQ 187
                    R  V    V      + V  +  ++      C  ++    +    ++   Q
Sbjct: 123 HAELRDKLGRYPVVRDKVLQRSSVLQVSVLQSETDPSRKLCVANTHLYWHPKGGNIRLIQ 182

Query: 188 AQW---LKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPND 232
                    ++       +P +  GDFN   +               + D      +   
Sbjct: 183 IAVALSHIKYVACDLYPNIPVIFCGDFNSTPSSGTYGFINTGGIAEDHEDWASNGEEERC 242

Query: 233 SLIRFPKEK-----DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIK 286
           ++      K           N        +DY  +         +    S          
Sbjct: 243 NMPLSHPFKLQSACGEPAYTNYVGGFYGCLDYIFIDRNALEVEQVIPLPSHEEVTTHQAL 302

Query: 287 SRGKRLSDHCPISIDYDF 304
                 SDH  +  D  +
Sbjct: 303 PSVSHPSDHIALVCDLKW 320


>gi|228989540|ref|ZP_04149525.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
 gi|229003360|ref|ZP_04161190.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
 gi|228757978|gb|EEM07193.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
 gi|228770265|gb|EEM18844.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
          Length = 263

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF-----------YSTERLIN 100
                L +  +    D++ LQE+        V        F            S    I 
Sbjct: 18  EKIRHLAKTIQEEGYDVIALQEVSQSIKAQNVCGNKKKDNFGLVLLAELEKLGSGNYNIV 77

Query: 101 HSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   DI+    A+  K+  V Q S+ +  +KD+      R+ V   V   GK +  
Sbjct: 78  WDYSHIGYDIYEEGSAIITKHPIVKQDSFFVSESKDTSYWKA-RKIVSATVSYKGKNMTF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L   +          ++ GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEETFQGQVDCLTQHVN----ENELSILMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              D+       D+     K+ +      K            ID  + ++       +  
Sbjct: 183 EGYDYLMQKGLYDTYELAFKKDEGTTVQGKIAGWDENKQNLRIDLILSNKPKTVISSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+ I  N          +SDH  + +  D
Sbjct: 243 FNGINRNI---------ISDHFGVEVQLD 262


>gi|114800092|ref|YP_762220.1| putative exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444]
 gi|114740266|gb|ABI78391.1| putative exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444]
          Length = 269

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 79/306 (25%), Gaps = 68/306 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ +WNIN                        +  +      D+V LQE    +A   
Sbjct: 4   PIKITTWNIN----------------SVRLRAPNVEAFVAAEKPDVVCLQETKCQDA--- 44

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 + +    +  + +         H  +A+  +   + Q   P L  ++       
Sbjct: 45  -----EFPLKAFKDMGLPYLVIRGQRGGHAGVAIASRLP-LEQVDVPDLCRENHARVIAA 98

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R             + V +I+L +    D+ +   +   +        L     +  +  
Sbjct: 99  RLP---------SGLEVHNIYLPAG--GDTPDPDANDKFAHKLDFLDRLGPGYKK-LKKG 146

Query: 203 VPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           V  V+ GD N   +                     +    +                   
Sbjct: 147 VKRVLVGDLNVAPHENDVWSHKQLLGIVSHTPQETERLEDSRKSAGFEDIARLAVPEEQK 206

Query: 247 ANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+   ++ A + +   S+             G + SDH 
Sbjct: 207 LYTWWSYRAADWAASNRGRRLDHIWANKAAMEDVKVSSYRIHPA-----WRSGWKPSDHA 261

Query: 297 PISIDY 302
           P+S+  
Sbjct: 262 PVSLTL 267


>gi|31209449|ref|XP_313691.1| AGAP004405-PA [Anopheles gambiae str. PEST]
 gi|30176802|gb|EAA44583.1| AGAP004405-PA [Anopheles gambiae str. PEST]
          Length = 387

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/345 (11%), Positives = 91/345 (26%), Gaps = 65/345 (18%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           +    ++  ADI+ LQE+ +     
Sbjct: 25  FTVMCYNVLCDKYATRQMYGYCPSWALSWEYRKKAILDEIRHYAADIISLQEVETDQFFN 84

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131
              P+     +       + +K  S  D       AI  R     ++++           
Sbjct: 85  FFKPELKNDGYEGIFSPKSRAKTMSEADRKYVDGCAIFFRSAKFTLIKEHLVEFNQLAMA 144

Query: 132 ---GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHL----KSFCFLDSLENTYSPSCS 182
              G+ +  +R   +    +  L+++       +        +      +  +     C 
Sbjct: 145 NAEGSDNMLNRVMPKDNIGLAALLKVKEGAWESVSSEAAQISQPILVCTAHIHWDPEFCD 204

Query: 183 LLSQQAQWLKDWITQKKES--------------LVPFVIAGDFNRKINYLGN-------- 220
           +   Q   L + +    +                V  V+ GDFN   +            
Sbjct: 205 VKLIQTMMLSNELKTILDEAGLSFRPGHKFDVNNVQLVLCGDFNSLPDSGVIEFLSAGRV 264

Query: 221 -----------NDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPIDYFV 261
                           + I   D+   F                  N     K  IDY  
Sbjct: 265 SMDHQDFKELGYKSCLQRISNCDTPNEFTHSFKLASAYSEDIMPYTNYTFEFKGIIDYIF 324

Query: 262 MDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +        L   S   +  N+          SDH P+ ++ +
Sbjct: 325 YSKQGMVPLGLLGPISPEWLRDNKVVGCPHPHIPSDHFPLLVELE 369


>gi|329114100|ref|ZP_08242864.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001]
 gi|326696639|gb|EGE48316.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001]
          Length = 261

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 75/303 (24%), Gaps = 74/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N                       L+  + K    D++ +QE+     +   
Sbjct: 1   MKLATWNVN----------------SVRQRMDLVLDWLKREQPDVLMMQEIKCETDL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +         +  ++   +    +   + L G  D  +R    
Sbjct: 42  -------FPKAAFEDAGYGCAVIGQKSYNGVSTLVRGDFSITTDH-LPGFSDPAARY--- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE+  + I + +++L +                   +    L            
Sbjct: 91  ------VEVRTQHIVLGNLYLPNGNSGGEQGYA------TKLEFLNALTARARLLLAEET 138

Query: 204 PFVIAGDFNRKI--------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            FV+AGD+N                       +        W  +      +        
Sbjct: 139 DFVLAGDYNICPAPIDCAPGALGPEDALVRPQSRAAYRRLLWLGLTDALRAVHPT-GAAY 197

Query: 244 RCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID+ ++     + L            D  +    R SDH P  
Sbjct: 198 TFWDYQARAWERDCGLRIDHMLLSPRLAERLQ-------TAEPDKNERAMPRPSDHVPFI 250

Query: 300 IDY 302
           +  
Sbjct: 251 VTL 253


>gi|282899308|ref|ZP_06307277.1| hypothetical protein CRC_00757 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195765|gb|EFA70693.1| hypothetical protein CRC_00757 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 256

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/283 (9%), Positives = 64/283 (22%), Gaps = 36/283 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ ++++N+       G   W             +    ++   ++   QE   +     
Sbjct: 2   QITVMTFNLRCDKPDPGERCW-------QKRVGAIACMIQHYQPELWGTQEGQPHQLRDL 54

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +      +R                    ++         P +    ++     
Sbjct: 55  QVLLPDYEFV-GGDRTGTGKGEHCAIFYKRGKLQLRETQDFYLSDTPEIPGSITWGTRLP 113

Query: 143 RRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           R            G  + +++ HL               S  L++               
Sbjct: 114 RMVTWANFIAEDLGFSLTIMNTHLDHEVSRARELGAGLVSLRLMNF-------------P 160

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                ++ GDFN     L          I      +    +K       +    +  I  
Sbjct: 161 REDYLLLTGDFNAGPRSLERIILADNYRIKDALGNLPVESQKTFHDFTGQAWDPRDTI-- 218

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                          +       DD +  G   SDH P+ +  
Sbjct: 219 ----------YCDRRWQINQVIIDDQQWEGIWPSDHFPVIVKL 251


>gi|262405346|ref|ZP_06081896.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           2_1_22]
 gi|262356221|gb|EEZ05311.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           2_1_22]
          Length = 341

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/343 (11%), Positives = 88/343 (25%), Gaps = 59/343 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++ L    +    +  Q+       +  +N+  L +        +           
Sbjct: 1   MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           +  +  +    + +    L  D       I+ + E+ +Y  +  +  +            
Sbjct: 61  NTMKYKAKLKNMSEILSMLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQ 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H +      +  A     K   +      +     + +    R  +     I G+K+ 
Sbjct: 118 YVHYEGADQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIAGEKMH 176

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  H  S      +             Q + +KD +  +++S    VI GD N      
Sbjct: 177 FIVNHWPSRAAASPVRERAGE-------QVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 228

Query: 219 GNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271
                         + P D    +                    D  V   N        
Sbjct: 229 SMAVALGAKRKPADVGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 288

Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297
            + +   ++  D +  +  +                  SDH P
Sbjct: 289 LKFYKHEIFRRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 331


>gi|241954618|ref|XP_002420030.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Candida dubliniensis CD36]
 gi|223643371|emb|CAX42248.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Candida dubliniensis CD36]
          Length = 362

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 76/298 (25%), Gaps = 31/298 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL + NI   ++       +    R       ++      + +I+ LQE+     +  +
Sbjct: 73  LRLYTNNIRFDNKNYPDKYEQPWEIRKIQSINSMKFNTFQGNGNIICLQEVLHNQLLDIL 132

Query: 84  FPKN---TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              N    W  +         S   +            +N        P + +K  +  A
Sbjct: 133 EGLNEIEEWNYYGVGRTDGKTSGEYAPIFYKDKDFKIIENSTFWLSPTPNIPSK-GWDAA 191

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R    +  E         +I    +            S  L+  + +           
Sbjct: 192 LERIVTMVTFESRLNPQIKFNIFNTHY--DHRGIIARRKSSQLIVDKMK---------NY 240

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKNLRNK-IPI 257
           +  P  + GDFN + N    +            LI        ++              I
Sbjct: 241 NDYPSFLCGDFNTEPNDEPYHILTTAGFKDGKILIDKNSAYGFETTFTGFDINNEPISRI 300

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKS------------RGKRLSDHCPISIDYD 303
           DY           +         ++D  +              G   SDH P+   Y+
Sbjct: 301 DYIW-SPAFTHTSLSSENETGNDSDDTYEVTLKQFGILSNWFNGHHFSDHRPVVSTYE 357


>gi|241166987|ref|XP_002409964.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215494698|gb|EEC04339.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 437

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 75/265 (28%), Gaps = 23/265 (8%)

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
              K      T +  Y  + D D VFLQE+ S     ++  K        T   + H+  
Sbjct: 16  GISKHREERMTAIANYLSSSDLDFVFLQEIWSQRDYKRIRSK--------TRNNLPHAHY 67

Query: 105 DSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
             +  + + + +  K+         Y L G    F          + +     +  ++++
Sbjct: 68  FHSGVLGSGVCILSKSPIADTGMLKYNLNGYAHKFYHGDWFGGKVVGLCKVNHRGLLINL 127

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           ++                 S    QA  +  ++    E+    ++AGDFN +      N 
Sbjct: 128 YVTHLHA--EYNRQRDIYLSHRICQAFEMSQYVKLTSETCDLAIVAGDFNTEPLDPPYNI 185

Query: 223 DFWKTIDPNDSLIR---FPKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESF 275
               T   +                   +   ++       IDY +           +  
Sbjct: 186 ILHNTCLEDAFDSLCVGATCGHPDNHYTSAYDKHTCPTGKRIDYVMFKVGRGVVANCKVC 245

Query: 276 SEILYNEDDIKSRGKRLSDHCPISI 300
                           LSDH P+ +
Sbjct: 246 KNPRLKTTSGLP----LSDHEPVEV 266


>gi|294339964|emb|CAZ88327.1| putative Nuclease [Thiomonas sp. 3As]
          Length = 267

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 83/305 (27%), Gaps = 68/305 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ + N+N +       +      +                 D++ +QE+       K
Sbjct: 5   PLRVTTLNLNGVRSAANKGVDDWLRSQAR--------------PDVLCVQEL-------K 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               +      +   L   + + +    ++ + +  K+     +    +G   +   A  
Sbjct: 44  ALEADMTPSLRTLGGLPGAAFQHAEKPGYSGVGLYWKHEPDEVR----IGFGHAEFDAEG 99

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +     G ++ ++  +  S    +  +       +   +    L        ++ 
Sbjct: 100 RYVEAIYKRSGGGRLSIVSAYFPSGSSSEERQQAKFRFLADFHEHLLAL--------KAA 151

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GD N                             + ID    +  F +   +  N
Sbjct: 152 GEVLLCGDVNIAHKEIDLKNWKGNLKNSGFLPEERAWMTRLIDEAGYVDVFRQLDPAP-N 210

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +           +S               +R SDH P
Sbjct: 211 RYTWWSNRGQARAKNVGWRIDYHLATPGIAAQAKSDSAWIYT---------EQRFSDHAP 261

Query: 298 ISIDY 302
           ++IDY
Sbjct: 262 LTIDY 266


>gi|15222370|ref|NP_174438.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|12597850|gb|AAG60160.1|AC074360_25 hypothetical protein [Arabidopsis thaliana]
 gi|332193247|gb|AEE31368.1| DNAse I-like protein [Arabidopsis thaliana]
          Length = 283

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 78/269 (28%), Gaps = 22/269 (8%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  +    KN +AD + LQE+  Y++    F +N     YS   + N    +    
Sbjct: 17  WEKRSKAILDNIKNFEADFICLQEVDEYHSF---FDRNMEAQGYSGIPIENKEGYECAIF 73

Query: 110 IHTAIA-------------VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NG 154
                A              + +N+ V   S  +         A     V +  +I    
Sbjct: 74  FKPKFAEFITYQTTRIQGYTKYENLCVAPSSSTVSSESSDVVNAEELSVVMVAFKILKPF 133

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
             + ++          D  ++        L  +    K+ I+         ++AGDFN K
Sbjct: 134 NHVVIIASSHLKSGKPDRWDDLKLAQVKTLMTELASFKEIISALTNCSPSVILAGDFNSK 193

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                  +         D    +   K      N        +DY     +    +I   
Sbjct: 194 PYVHKYINS-DNIPSDIDLRSVYEFTKGEPRFTNNVPGFAETLDYMFYTHS---EIISPV 249

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +E D        SDH PI ++++
Sbjct: 250 KLLDSPDEVDFLPNEIHPSDHLPIGVEFE 278


>gi|325286008|ref|YP_004261798.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489]
 gi|324321462|gb|ADY28927.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489]
          Length = 254

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 82/302 (27%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+N+N +                         +    D D++ LQE+       K 
Sbjct: 1   MKIVSYNVNGIRAAINKGF---------------IDWLTATDPDVICLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +       +    +    ++ +A+  K            G    +     R
Sbjct: 39  LKEQLDLSLFEEAGYSYNYWYSAQKKGYSGVAILSKTEP----DNVTYGTGIDYMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   I ++ ++L S                   +     + +I + K+   
Sbjct: 95  N-----IRADFGDISIMSMYLPSGT--------NLARLDFKLKYMDDFQKYINELKKDKP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  +D                W         I   +  +   +   
Sbjct: 142 NIIVVGDYNICHEAIDIHDPVRNKNVSGFLPVEREWIGNFMESGFIDSFRHFNKEPHNYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DY ++ +     L +               +  + SDHCPI +
Sbjct: 202 WWSYRANARNNNKGWRLDYGMVSKTLENRLKRAVIL-----------KEAKHSDHCPILV 250

Query: 301 DY 302
           + 
Sbjct: 251 EL 252


>gi|313157364|gb|EFR56787.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 383

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 81/287 (28%), Gaps = 42/287 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82
            +++++N+     + G+S   +           + Q   + + DI+ LQE  +  A    
Sbjct: 124 FKVMTYNVRGFYGENGLSSVGD-----------VLQLIGDHNPDIICLQEFNARLAGQSD 172

Query: 83  --VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--QSYPLLGAKDSFS 138
                   +            S   +   I +   + +  V +      +  L   D   
Sbjct: 173 EFALLDEKYESAVFGRTQAPDSLYGAPLVILSKYRILRSGVVLTPGTSVWADLLIGDDTI 232

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQAQWLKDWI 195
           R  N       ++            L      D   S+   +  +  L + Q   +   +
Sbjct: 233 RVFNNHLRSTAIKAADNDYLTSRGFLSDTAREDKLRSMAGRFRENSVLRAAQVDSIAVVV 292

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
              +      ++ GDFN             K ++       F +      +  +   N +
Sbjct: 293 EAWRSR---CIVCGDFNDTP-MSYVYRTMAKGLND-----AFSQCGSGYSHTFRGFFNTL 343

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            IDY +  +               ++    +      SDH P+ +  
Sbjct: 344 RIDYVLSSEG--------------FDALSYEVPTVDYSDHHPVVVRL 376


>gi|300113645|ref|YP_003760220.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
 gi|299539582|gb|ADJ27899.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
          Length = 226

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 84/283 (29%), Gaps = 59/283 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-AK 82
           +R  ++NI++    +              D        ++L AD++ LQE+   +     
Sbjct: 1   MRFATYNISSCIGTDRRF-----------DPARTASVIRSLKADVLALQEVEHRSIKGQD 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +              +        +     A+  R + ++V +    +        R   
Sbjct: 50  LLDYLAHQTGL--RAIPGPIFLRRSLRYGNALLTRTEWLKVQRHELSVP-------RREP 100

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+++ ++  G+KI V+  HL               S    S Q Q L +         
Sbjct: 101 RGAIDVNLKWQGQKIRVVATHLGL-------------SARERSFQVQQLLNL--GLTPDG 145

Query: 203 VPFVIAGDFNR-KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
              V+ GDFN         +    +                S   +       + +D   
Sbjct: 146 ERTVLMGDFNEWWPWSRSLHRLRGEF------------GCFSNLPSFPGCYPILALDRIW 193

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +            +  +L  E +  S  +  SDH P+    ++
Sbjct: 194 L----------HGYQRLLALEVETSSLARVASDHLPLKAVVEW 226


>gi|260550183|ref|ZP_05824396.1| catabolite repression control protein [Acinetobacter sp. RUH2624]
 gi|260406711|gb|EEX00191.1| catabolite repression control protein [Acinetobacter sp. RUH2624]
          Length = 280

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD+V +QE   ++    +
Sbjct: 20  LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTE 64

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   V  +        DS  R   
Sbjct: 65  KFRPEGWHTHLFPAERAGYA----------GTAIYSRLPFVSIKDGLGFELADSQGRF-- 112

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++     + +  ++L S    +        + +            + Q ++ 
Sbjct: 113 ---ISAEFDLGLSHPVHIASLYLPSGSSGE-------EAQARKDLFLGEYAKILKQWRDE 162

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD+N     +   +                +   I      +   +   +   
Sbjct: 163 NKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAE 222

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +     +                + +  SDH P
Sbjct: 223 LYSWWSNRGQARAKNVGWRIDYQACSPDWKARTVNAWV-----------YKDQWFSDHAP 271

Query: 298 ISIDY 302
           + IDY
Sbjct: 272 VIIDY 276


>gi|223039251|ref|ZP_03609541.1| exodeoxyribonuclease III [Campylobacter rectus RM3267]
 gi|222879612|gb|EEF14703.1| exodeoxyribonuclease III [Campylobacter rectus RM3267]
          Length = 256

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +                + +    D + LQE+         
Sbjct: 1   MKLISWNVNGLRAVAAKDGF---------------AWLEEQKPDFLGLQEI---KVRESD 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P   + + ++   + + ++       ++ +    K   V Q++      +         
Sbjct: 43  VPSEIYKLGFNEISVNSATRA-----GYSGVMSLAKFASVTQKAAFFDDDEGR------- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E     + + +I+  +    ++         +     AQ L        +   
Sbjct: 91  -----VLEHRFGNVALFNIYFPNGQKDEARLAYKMDFYAKFLAYAQEL-------VKQGK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GD N                    L     +   +  +  +  F   +    +A 
Sbjct: 139 DVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAWLDEVVSHGFIDTFRHVRGDAVDAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +  +    L            D         SDHCP+ 
Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISASLKDRLK-----------DAFILSDITGSDHCPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|86149633|ref|ZP_01067863.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597280|ref|ZP_01100515.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218561918|ref|YP_002343697.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|85839901|gb|EAQ57160.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190341|gb|EAQ94315.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359624|emb|CAL34409.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284925531|gb|ADC27883.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315927175|gb|EFV06525.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315928582|gb|EFV07877.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 305]
          Length = 252

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 1   MKLLSWNVNGLRAICDKNA---------------LDWIAQEQIDFIGFQEI---KAHEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 43  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFNSEVKK-------CEFFDDEEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +        L            
Sbjct: 91  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMQFYADFLVYLDKLLK-------DGF 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|294627673|ref|ZP_06706255.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294667101|ref|ZP_06732326.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292598025|gb|EFF42180.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603111|gb|EFF46537.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 255

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 86/295 (29%), Gaps = 60/295 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70
           AS ++ +R+++ NI   S     S +               +    + +       DIV 
Sbjct: 3   ASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGER--DIVG 60

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           LQE    +  +    +  +    +     +H   R       +A  +  K   V  Q + 
Sbjct: 61  LQEADPGSLRSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHA 120

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L G      R G R  +          + V   HL                 +    Q  
Sbjct: 121 LPG------RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLA 161

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247
           ++ + ++    +    ++ GDFN   +                 L R  + +   C  + 
Sbjct: 162 FIAELLSDHPNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCDVHT 206

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + R    ID+ ++  +                 +  ++     SDH  + +D 
Sbjct: 207 FPSWRPDRAIDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 247


>gi|53803236|ref|YP_115006.1| endonuclease/exonuclease/phosphatase family protein [Methylococcus
           capsulatus str. Bath]
 gi|53756997|gb|AAU91288.1| endonuclease/exonuclease/phosphatase family protein [Methylococcus
           capsulatus str. Bath]
          Length = 282

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 85/285 (29%), Gaps = 54/285 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKR----TTSDYTLLRQYAKNLDA-DIVFLQEMGSYN 78
           +RL S+NI T         +     R    +T     L + A+ L+  DI  LQE+    
Sbjct: 28  LRLASFNIQTGISTSSYRDYITGGWRHVWPSTKRLPNLNRIAQLLEPFDIAGLQEVDGGG 87

Query: 79  AVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             +    +  +   ++      N   R        +  +  +        YPL G     
Sbjct: 88  MRSHNIVQTQYLAEHAGFAYWHNQVNRRIGRLALHSNGLLSRIRPDFVHDYPLPGMPG-- 145

Query: 138 SRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                R A+           ++V   HL               S     +Q +++ D I 
Sbjct: 146 -----RGALLARFGRDPRNALYVCVAHLAL-------------SRRARLKQLRFISDLIG 187

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                    V+ GD N + N     D        ND + R             + R    
Sbjct: 188 HLP----YVVMMGDLNCEPNTPEL-DLLLDATHLNDPVCRL--------KTFPSWRPHKM 234

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +D+ ++  +                 + ++      SDH P+S++
Sbjct: 235 LDHILVTPSLR--------------VNRLEVIDFACSDHLPVSME 265


>gi|297160831|gb|ADI10543.1| hypothetical protein SBI_07423 [Streptomyces bingchenggensis BCW-1]
          Length = 455

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 83/300 (27%), Gaps = 40/300 (13%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           VP  A  +    ++S+N+  L E    S  + +    +               D+V +QE
Sbjct: 40  VPTAAPDSGSFNVLSYNVAGLPEGLSSSHPEKNTPLISPRLGA---------YDLVNVQE 90

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             +Y+A       + +    S                   +           +       
Sbjct: 91  DFNYHAALYAGDDHPYRTPTSG-----------GVPFGDGLNTLSDLPYDDFERVKWARC 139

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             +        ++       G  + + ++H  +      L    +            L D
Sbjct: 140 NGTDCLTPKGFSLARARLAEGVYVDLYNVHTNAGTTAADLTARRAN--------ITQLSD 191

Query: 194 WITQKKESLVPFVIAGDFNRKINYLG--NNDDFWKTIDPNDSLIRFPKEKDSR------- 244
           +I     +    ++ GD N +         D   +    +  +                 
Sbjct: 192 FIAAN-SAGNAVIVMGDTNTRYTRAEDNIRDLTGRNGLTDAWVQLIRGGSAPPAGSDALV 250

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           C+ +        +D  +   +    L   +      + D + + G+ LSDH P ++D+ +
Sbjct: 251 CDPDHVTNTCEVVDKILYRSS--PLLTLTATRYNNEHPDFLDAAGEPLSDHYPHTVDFSW 308


>gi|269119015|ref|YP_003307192.1| exodeoxyribonuclease III Xth [Sebaldella termitidis ATCC 33386]
 gi|268612893|gb|ACZ07261.1| exodeoxyribonuclease III Xth [Sebaldella termitidis ATCC 33386]
          Length = 255

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 93/307 (30%), Gaps = 82/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ SWN+N +        +                     + +IV +QE    +     
Sbjct: 1   MRIYSWNVNGIRALYNKGEFFK---------------LFEEEPEIVCIQETKAQAEQLSE 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++   N +  F+            ++   ++ +AV  K   ++ + + +         + 
Sbjct: 46  ELLNINGYSSFF----------ESADKKGYSGVAVYSKKKPLMVKKFDI-----ERFDSE 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +E+  +   +++ +  +        +     C         + +++ ++K+S
Sbjct: 91  GRY-----IELEYEDFILINCYFPNSQEKGKRLDYKIDFC-------DEILNYLEERKKS 138

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               +I GD+N                         +   K I+     +   ++     
Sbjct: 139 GKAVIITGDYNIAHKPIDLARPKDNEENPGYLPEEREWMTKFIEAG--YVDSFRKFYPEE 196

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDYF +++ +   LI       ++            SDHC
Sbjct: 197 VKYTWWSYRTRAREKNIGWRIDYFCINKESEGILIDSGIRNDVF-----------GSDHC 245

Query: 297 PISIDYD 303
           PI ID  
Sbjct: 246 PIYIDIS 252


>gi|262199576|ref|YP_003270785.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365]
 gi|262082923|gb|ACY18892.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365]
          Length = 301

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 80/319 (25%), Gaps = 73/319 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWK--------------NSVKRTTSDYTLLRQYAKNLDADIV 69
           VR+VSWN+N L   +  +  +              ++  R        R++ + +DA IV
Sbjct: 5   VRVVSWNVNGLRAVDRTTPRRASAAASPSPGQVRASTGARAQRGGGRFRRWIERVDATIV 64

Query: 70  FLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            +QE+ +       ++     W           +S                     L   
Sbjct: 65  GVQEVRARRDALPRRLLQPRGWHAHLVEAERAGYSGVGLYAK--------------LAPD 110

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                          R  +      +  ++ V +++  +     +  N  +         
Sbjct: 111 GADTALAGGDFDREGRLQIA-----HFGRLSVANVYFPNG----NGSNRDNSRVPFKLDF 161

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DS 233
            + L D +   +++    ++ GDFN     +                             
Sbjct: 162 YRALFDALGALRDAGQRVLVMGDFNTAHRDIDLARPKQNRKTSGFLPEERAELDRWVAAG 221

Query: 234 LIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
            +   +  +           +           IDY      A  F+              
Sbjct: 222 WVDTFRHFEPGPGHYTWWSQRAGVRARNIGWRIDYVFACPEAMPFVRSA----------- 270

Query: 285 IKSRGKRLSDHCPISIDYD 303
                   SDHCP  +  D
Sbjct: 271 FLMPQVGGSDHCPHGVVLD 289


>gi|157964825|ref|YP_001499649.1| exodeoxyribonuclease III [Rickettsia massiliae MTU5]
 gi|157844601|gb|ABV85102.1| Exodeoxyribonuclease III [Rickettsia massiliae MTU5]
          Length = 268

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 86/303 (28%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +   LLR +      DI+ LQE+    A    
Sbjct: 9   MKIATWNIN----------------SIKTRLNLLRNFLSKETPDILLLQEIKCETA---- 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    +++     R
Sbjct: 49  ------KFPFDALSDLPYNSYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + +      ++ ++  +  F+ S +     +            ++++ KK    
Sbjct: 99  F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 151

Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN     +                      +TI  +     + +         
Sbjct: 152 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKLRTILNSGFEDLY-RLMHPNKQEF 210

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L            D      ++ SDH P+ 
Sbjct: 211 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 263

Query: 300 IDY 302
             +
Sbjct: 264 ASF 266


>gi|146284370|ref|YP_001174523.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           stutzeri A1501]
 gi|145572575|gb|ABP81681.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           stutzeri A1501]
 gi|327482753|gb|AEA86063.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           stutzeri DSM 4166]
          Length = 289

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 82/298 (27%), Gaps = 58/298 (19%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLD 65
           L         ++RL+S+NI      E    +     +          +   + +   N  
Sbjct: 23  LASTGLPADGRLRLLSFNIQVGISTERYHHYLTRSWQHLLPHPGRAGNLQRIGEVLGNY- 81

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVL 124
            D+V LQE    +  +    +                  R+       +  V  +     
Sbjct: 82  -DLVALQEADGGSLRSGYVNQVEHLAHLGAFPYWYQQLNRNLGRFAQHSNGVLSRLEPQG 140

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            + +PL G          R A+ L        + V+ +HL                    
Sbjct: 141 LEDHPLPGPSG-------RGAILLRFGEGADALVVVMMHLALGGG-------------AR 180

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           ++Q  +++D I          V+ GD N   N           +  N  L          
Sbjct: 181 ARQLAYIRDLIGDY----RHQVLMGDMNTHAND----------LLENSPLRDLGLLAPQV 226

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + R +  +D+ ++  +     +                    +SDH P++++ 
Sbjct: 227 EATFPSWRPQRCLDHILLSPSLTLERVDV--------------LALPISDHLPVAVEI 270


>gi|332187721|ref|ZP_08389456.1| exodeoxyribonuclease III family protein [Sphingomonas sp. S17]
 gi|332012287|gb|EGI54357.1| exodeoxyribonuclease III family protein [Sphingomonas sp. S17]
          Length = 260

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 77/309 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ SWNIN                       ++ Q+      DI+ LQE  +   +   
Sbjct: 1   MKIASWNIN----------------SVRFRAAIVEQFLTEAAPDILCLQETKVVDDDFPF 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F    +                    +H  +A+  +   V           D      
Sbjct: 45  DLFRAAGYEHII-----------IHGQRMHHGVAIASRVPIVED---------DRLDWQA 84

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           N  A  + V +    + + ++++ +   +               Q+  +L   I    + 
Sbjct: 85  NAEARHVGVRLPNG-VRLENVYIPAGGDVPD-----REVNPKFGQKLDFLGRMIEWSGKL 138

Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             P ++ GDFN                   +     +        ND +        +  
Sbjct: 139 DCPTILTGDFNIAPLESDVWSHKQLLDVVSHTPIEVETLASLQASNDWVDLGRHFIPAPQ 198

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+    ++  +  I            +      + SDH
Sbjct: 199 RLYTWWSYRAKDWAASDRGRRLDHMWATRDVAEKAIGH-------RVFEGCRSWLKPSDH 251

Query: 296 CPISIDYDF 304
            PI  ++DF
Sbjct: 252 IPIMTEFDF 260


>gi|315057682|gb|ADT72011.1| Exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni S3]
          Length = 252

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 1   MKLLSWNVNGLRAICDKNA---------------LDWIAQEQIDFIGFQEI---KAHEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 43  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFNSEVKK-------CEFFDDEEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +        L            
Sbjct: 91  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|89052912|ref|YP_508363.1| exodeoxyribonuclease III [Jannaschia sp. CCS1]
 gi|88862461|gb|ABD53338.1| exodeoxyribonuclease III [Jannaschia sp. CCS1]
          Length = 262

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/308 (10%), Positives = 73/308 (23%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
              L +WNIN                       ++ Q       DI+ LQE  S      
Sbjct: 2   PFTLATWNIN----------------SVRLRQPIVSQLMTEEAPDILCLQECKSPVDKMP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           + VF    +                     +  +A+  K       S+   G   +    
Sbjct: 46  SDVFAALGYTHV-----------VARGQKGYNGVAIYSKLPMEEAGSHEFAGLDHARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +   +E     + + + ++ +    D  +   +            ++DW      
Sbjct: 93  -----IAGRLENG---VTIHNFYVPAG--GDVPDRDVNIKFGQKLDYLTDMRDWAKTDTP 142

Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRC 245
                ++ GD N         ++    K +                   +   ++     
Sbjct: 143 QKS--ILLGDLNIAPREDDVWSHKQLLKVVSHTPIEVEHLAEAQDAGGWVDVTRKDIPDG 200

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +          +  +          ++ SDH
Sbjct: 201 PLFSWWSYRSPDWDNADKGRRLDHVWATPDISNAAHSSRIARHV-------RGWEKPSDH 253

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 254 APVFATFD 261


>gi|327470504|gb|EGF15960.1| exodeoxyribonuclease [Streptococcus sanguinis SK330]
          Length = 275

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAEDADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  +    G  
Sbjct: 55  KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E +G   +V  ++  +        +      +  ++    L        +   
Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATL--------DGQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|226942361|ref|YP_002797434.1| endonuclease/exonuclease/phosphatase family protein [Azotobacter
           vinelandii DJ]
 gi|226717288|gb|ACO76459.1| endonuclease/exonuclease/phosphatase family protein [Azotobacter
           vinelandii DJ]
          Length = 286

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 85/292 (29%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
           +   ++RL+S+NI      E    +     +          +   +       D D+V L
Sbjct: 29  TGDGRLRLLSFNIQVGIRTENYRHYLTRSWQHLLPHAGRAVNLQRIGALLA--DFDLVAL 86

Query: 72  QEMGSYNAVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE+   +  +    +        +         R+       +  +  +      + +PL
Sbjct: 87  QEVDGGSLRSDYVNQVEHLAQLGNFPYWYQQLNRNLGPLAQHSNGLLSRLRPSGLEDHPL 146

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ L +      + V+ +HL                    ++Q  +
Sbjct: 147 PGPPG-------RGAILLRLGEGAGSLAVIMMHLALG-------------ARTRTRQLAY 186

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ +          V+ GD N             + +  +  L               +
Sbjct: 187 IRELVGDY----RHLVLMGDMNTH----------ARELLEHSPLRDLGLLAPQIEATFPS 232

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  ID+ ++  +     +Q     I              SDH P++++ 
Sbjct: 233 WRPQRCIDHILLSPSLTLERVQVLPQPI--------------SDHLPVAVEI 270


>gi|325000932|ref|ZP_08122044.1| exodeoxyribonuclease III [Pseudonocardia sp. P1]
          Length = 281

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 67/275 (24%), Gaps = 56/275 (20%)

Query: 57  LRQYAKNLDADIVFLQEM-----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
           L  +    DAD V LQE+         A+        W +  +                 
Sbjct: 24  LLDWLAVADADAVCLQEVRARPEELPAALTDALAAAGWHLRLAPCETA---------KGR 74

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             +AV  ++     +      A D   R        L V++ G  + V  ++L       
Sbjct: 75  NGVAVLSRSEPEAVRIGFGDPATDLDGR-------YLEVDLPG-DLTVASLYLPKGVAGT 126

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------- 223
             ++               L+    +   +    V+AGD+N         +         
Sbjct: 127 DKQDAKDAFLKTFG---DHLRTAFARCAATGREMVVAGDWNIAPTEQDLRNWRNNQRNSG 183

Query: 224 -------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAY 267
                  ++  +  +                      +           ID+ +      
Sbjct: 184 FLPHEREWFAGLLEHGWTDVVRALHPGTDGPYSWWTYRGRAFDNDVGWRIDHLLTTPGLA 243

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               +          +   S   R SDH P+ +  
Sbjct: 244 AAAHEA-------VVERAPSHDTRWSDHAPVVVRL 271


>gi|319935137|ref|ZP_08009577.1| exodeoxyribonuclease III [Coprobacillus sp. 29_1]
 gi|319809962|gb|EFW06345.1| exodeoxyribonuclease III [Coprobacillus sp. 29_1]
          Length = 252

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 84/301 (27%), Gaps = 77/301 (25%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
            VSWN+N L                         + K++DADI  +QE      + +   
Sbjct: 3   FVSWNVNGLRACLKKGFE---------------DFFKDVDADIFAIQETK----LQRNQI 43

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
              +  + S          D+    ++ +A+  K   +      + G          R  
Sbjct: 44  DLEFEGYTSY-------YNDAIKKGYSGVAIYTKKEPMNV----IYGMGIEEHDQEGRL- 91

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               + +  +K + + ++  +        +          Q  Q L        +   P 
Sbjct: 92  ----ITLEFEKFYFVAVYTPNSKRELERLDYRQVWEDAFRQHVQKL--------KESKPV 139

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANKNL 251
           V+ GD N   N +   +D     +               N   I   + K          
Sbjct: 140 VLCGDLNVAHNEIDLKNDKTNHKNAGFTDQERAKFSELLNSGFIDTFRYKYPETEMYSWW 199

Query: 252 RN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         IDYFV+ ++  + +            D         SDHCP+ ++ 
Sbjct: 200 SYMFKAREKNAGWRIDYFVVSEDLKENIK-----------DAYIYTEIMGSDHCPVGVEL 248

Query: 303 D 303
           +
Sbjct: 249 E 249


>gi|167957331|ref|ZP_02544405.1| exonuclease III [candidate division TM7 single-cell isolate TM7c]
          Length = 265

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 71/304 (23%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL SWN+N +        +                +      DI+ LQE  +     ++
Sbjct: 1   MRLYSWNVNGIRAVIKKGTFLP--------------FISEYQPDILCLQETKAKKNQVEI 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +   +++     +S     +               + + Y L            R
Sbjct: 47  -DLPDYFEIWNSAERAGYSGTAIFSKAKPLNTWL-DFPEDIVKKYNLDQDDYGNPNNEGR 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSL-ENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +    +       V  ++  +     S  +  +        +  + L+          
Sbjct: 105 -IIAAEFDN----FIVATVYTPNSKGDLSRLQLRHQKWDKAWLEYMKKLESI-------- 151

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +  GD N                           +     +     F          
Sbjct: 152 KPVLFCGDLNVAHTEDDLANPKPNIGKHGFTNEERAGFDAFIQSGFKDTFRIFTKGNGYY 211

Query: 248 NKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +                IDY++  +     + +                    SDHCP+S
Sbjct: 212 SWWTHWANARARNIGWRIDYWLASEKLANKITEAQIH-----------PDIMGSDHCPVS 260

Query: 300 IDYD 303
           +  D
Sbjct: 261 VTID 264


>gi|12322536|gb|AAG51265.1|AC027135_6 hypothetical protein [Arabidopsis thaliana]
          Length = 274

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 78/269 (28%), Gaps = 22/269 (8%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                  +    KN +AD + LQE+  Y++    F +N     YS   + N    +    
Sbjct: 8   WEKRSKAILDNIKNFEADFICLQEVDEYHSF---FDRNMEAQGYSGIPIENKEGYECAIF 64

Query: 110 IHTAIA-------------VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NG 154
                A              + +N+ V   S  +         A     V +  +I    
Sbjct: 65  FKPKFAEFITYQTTRIQGYTKYENLCVAPSSSTVSSESSDVVNAEELSVVMVAFKILKPF 124

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
             + ++          D  ++        L  +    K+ I+         ++AGDFN K
Sbjct: 125 NHVVIIASSHLKSGKPDRWDDLKLAQVKTLMTELASFKEIISALTNCSPSVILAGDFNSK 184

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                  +         D    +   K      N        +DY     +    +I   
Sbjct: 185 PYVHKYINS-DNIPSDIDLRSVYEFTKGEPRFTNNVPGFAETLDYMFYTHS---EIISPV 240

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +E D        SDH PI ++++
Sbjct: 241 KLLDSPDEVDFLPNEIHPSDHLPIGVEFE 269


>gi|271498824|ref|YP_003331849.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586]
 gi|270342379|gb|ACZ75144.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586]
          Length = 380

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 80/263 (30%), Gaps = 28/263 (10%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               L ADI+   E+ +   +     +      ++   +I+         I  A   R +
Sbjct: 121 VINALKADILCAAEVENMAVLHDFNQQILADQAFAQYVMIDSPN--DPRGIDVACLTRHR 178

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYS 178
             ++      +     SFS   +R  +E+ ++I   + + VL  H KS    +  E   S
Sbjct: 179 ITQL---RTHIFDTSASFSPLFSRDCLEVTIDIGLTQPVHVLCNHFKSQNGRNDEERERS 235

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTIDPNDSLIRF 237
                   QA+ + D +          V+ GD N       ++    +   D +  +   
Sbjct: 236 ARRRH--AQAERVADIVRGYNLQQEYVVVMGDLNEDSANPWHSLAPLFSVADLHPVVDPA 293

Query: 238 PKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFS----------------EI 278
             E           ++      +DY  +    ++  +                     + 
Sbjct: 294 LPETARYTYYFSGGKSGERLNQLDYIFISTPLHQAKVDWGIERRGIYNIDKIAAKEGADP 353

Query: 279 LYNEDDIKSRGKRLSDHCPISID 301
           +     + S     SDH  I ++
Sbjct: 354 VTPFPTVTSWDTAASDHAAIWVE 376


>gi|239814966|ref|YP_002943876.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
 gi|239801543|gb|ACS18610.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
          Length = 260

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 84/303 (27%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N ++                    L+  +      D+  LQE+ S +     
Sbjct: 1   MKIATFNVNGINS----------------RLALVLSWLAEARPDVACLQELKSPDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +  R   +            +A+  +         P+   +     + + 
Sbjct: 41  ------NFPAAAIREAGYGVLFHGQRAWNGVAILAR------GREPIETGRGLDGNSEDS 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           ++  L   +NG  + V  ++L +       +  Y        +  + L           +
Sbjct: 89  QSRYLEAVVNG--VIVGCLYLPNGNPQPGPKFDYK------LEWFERLNAHARLLYGCGM 140

Query: 204 PFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+AGDFN         +                 F + +    +     +        
Sbjct: 141 PAVLAGDFNVVPTDADIYNPASWQDDALLQPESRAAFARLLKQGWTDAIRTRHPREAIYT 200

Query: 248 NK-NLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                RN+        ID+ ++++    FL   +        D         SDH P   
Sbjct: 201 YWDYWRNRWPRNAGLRIDHLLLNRELAPFLADANV-------DREVRGRPGASDHAPAWA 253

Query: 301 DYD 303
             D
Sbjct: 254 LLD 256


>gi|58269854|ref|XP_572083.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|74684000|sp|Q5KDJ2|CCR4_CRYNE RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|57228319|gb|AAW44776.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 744

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 92/351 (26%), Gaps = 66/351 (18%)

Query: 15  PCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             T+   +   ++++NI     +     S   +          LL +      AD+V LQ
Sbjct: 380 TPTSGKQESFSVLTYNILCASFAPATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQ 439

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSY 128
           E+         +P      +       + +K  S ++       A   +++  R+++   
Sbjct: 440 EIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSVDEQKLVDGCATFWKEEKFRLVETQV 499

Query: 129 PLLG----------AKDSFSRAGNRRAVELL----VEINGKKIWVLDIHLKSFCFLDSLE 174
                          +D F+R  +R  + ++       +G ++ V +       +     
Sbjct: 500 IEFNQLALQKTDMRTEDMFNRVMSRDNIAVVAALEFRASGGRLLVANS---HIYWDHRYR 556

Query: 175 NTYSPSCSLLSQQAQWLKD----------------------WITQKKESLVPFVIAGDFN 212
           +       +L ++ + + +                      +   +K   +P ++  D N
Sbjct: 557 DVKLVQIGMLMEELEKIVEQFSRYPVKLDTDPEYNNGKPPKYERSEKGRDIPLIMCVDLN 616

Query: 213 RKINYLGNN--------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                   +                          +  +  L             N    
Sbjct: 617 SFSGSAVYDYLSSGSIPGDHEDFMSHLYGRYTASGLKHHLGLRSACAGIGEMRMTNFTPT 676

Query: 253 NKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               IDY            +     +   ++          SDH P+   +
Sbjct: 677 FAAAIDYVFYTPRTMKVTSVLGDVDKAYLDKTVGFPNAHFPSDHIPVFTQF 727


>gi|77165597|ref|YP_344122.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|254433781|ref|ZP_05047289.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
 gi|76883911|gb|ABA58592.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|207090114|gb|EDZ67385.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
          Length = 226

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 85/282 (30%), Gaps = 57/282 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R V++NI++    +              D        ++L AD++ LQE+   +   + 
Sbjct: 1   MRFVTYNISSCIGTDRRF-----------DPARTASVIRSLKADVLALQEVEHRSVKGQD 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  + + T  +           +    A+      +  Q + L        R   R
Sbjct: 50  LLD---YLAHQTGLMAIPGPIFLRRSLRYGNALLTHAELLKIQRHELSIP-----RREPR 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+++ ++  G+KI V+  HL               S    S Q Q L            
Sbjct: 102 GAIDVDLKWQGQKIRVVATHLGL-------------SARERSFQVQQLLGL--GLTPDGE 146

Query: 204 PFVIAGDFNR-KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
             V+ GDFN         +    +              + S   +       + +D   +
Sbjct: 147 RTVLMGDFNEWWPWSRSLHRLRGEF------------GRFSNLPSFPAYYPILTLDRIWL 194

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       +  +L  E +  S  +  SDH P+    ++
Sbjct: 195 ----------HGYQRLLAMEVETSSLARVASDHLPLKAVVEW 226


>gi|134113731|ref|XP_774450.1| hypothetical protein CNBG0960 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257088|gb|EAL19803.1| hypothetical protein CNBG0960 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 744

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 92/351 (26%), Gaps = 66/351 (18%)

Query: 15  PCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             T+   +   ++++NI     +     S   +          LL +      AD+V LQ
Sbjct: 380 TPTSGKQESFSVLTYNILCASFAPATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQ 439

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSY 128
           E+         +P      +       + +K  S ++       A   +++  R+++   
Sbjct: 440 EIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSVDEQKLVDGCATFWKEEKFRLVETQV 499

Query: 129 PLLG----------AKDSFSRAGNRRAVELL----VEINGKKIWVLDIHLKSFCFLDSLE 174
                          +D F+R  +R  + ++       +G ++ V +       +     
Sbjct: 500 IEFNQLALQKTDMRTEDMFNRVMSRDNIAVVAALEFRASGGRLLVANS---HIYWDHRYR 556

Query: 175 NTYSPSCSLLSQQAQWLKD----------------------WITQKKESLVPFVIAGDFN 212
           +       +L ++ + + +                      +   +K   +P ++  D N
Sbjct: 557 DVKLVQIGMLMEELEKIVEQFSRYPVKLDTDPEYNNGKPPKYERSEKGRDIPLIMCVDLN 616

Query: 213 RKINYLGNN--------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                   +                          +  +  L             N    
Sbjct: 617 SFSGSAVYDYLSSGSIPGDHEDFMSHLYGRYTASGLKHHLGLRSACAGIGEMRMTNFTPT 676

Query: 253 NKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               IDY            +     +   ++          SDH P+   +
Sbjct: 677 FAAAIDYVFYTPRTMKVTSVLGDVDKAYLDKTVGFPNAHFPSDHIPVFTQF 727


>gi|258543182|ref|YP_003188615.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01]
 gi|256634260|dbj|BAI00236.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01]
 gi|256637320|dbj|BAI03289.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-03]
 gi|256640372|dbj|BAI06334.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-07]
 gi|256643429|dbj|BAI09384.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-22]
 gi|256646484|dbj|BAI12432.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-26]
 gi|256649537|dbj|BAI15478.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-32]
 gi|256652523|dbj|BAI18457.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655581|dbj|BAI21508.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-12]
          Length = 261

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 73/303 (24%), Gaps = 74/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L +WN+N                       L+  + K    D++ +QE+         
Sbjct: 1   MKLSTWNVN----------------SVRQRLDLVLDWLKREQPDVLMMQEIKCETD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +         +  +A   +       +  L G  D  +R    
Sbjct: 41  ------QFPKAAFEDAGYGCAGVGQKSYNGVATLVR-GDFSVTTDRLPGFSDPAARY--- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE+N + + + +++L +                   +    L            
Sbjct: 91  ------VEVNTQGVVLGNLYLPNGNSGGEQGYA------TKLEFLSALTGRARLLLAEET 138

Query: 204 PFVIAGDFNRKI--------------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            F +AGD+N                       +        W  +      +        
Sbjct: 139 DFALAGDYNICPAPIDCAPGALGPEDALVRPQSRAAYRRLLWLGLTDALRALHPT-GAAY 197

Query: 244 RCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID+ ++     + L            D  +    R SDH P  
Sbjct: 198 TFWDYQARAWERDCGLRIDHMLLSPRLAERLQ-------TAEPDRNERAMPRPSDHVPFI 250

Query: 300 IDY 302
           +  
Sbjct: 251 VTL 253


>gi|254881208|ref|ZP_05253918.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|254834001|gb|EET14310.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 359

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/336 (12%), Positives = 88/336 (26%), Gaps = 85/336 (25%)

Query: 3   RKYVLALVFFLVPCTASV---------------AQKVRLVSWNINTLSEQEGVSLWKNSV 47
           RKY L L F  + C+                     ++ +S+N     +    +    + 
Sbjct: 66  RKYAL-LSFLGLVCSIGAIRTYFPVNVFVSDVPEGAIKFLSYNTMAFEKNRANTKDNPNP 124

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                    + +Y +N +ADI+ LQE         +                   K    
Sbjct: 125 ---------VLEYLRNSNADIICLQE--------YIVGGRLTKKEVDYALRDYPYKNYHK 167

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 +    +   +           +         ++   +++NG  + V++ HL+S 
Sbjct: 168 ISGANGLGCYSRFPILSAHPVKYASLNN--------GSIAYKIKVNGDTLLVVNNHLESN 219

Query: 168 CFLDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVP 204
              +  +  Y                         + ++ + QA  +   +   K     
Sbjct: 220 KLTEKDKEVYREMMKDPDKQKVSQGSRLLIGKLAEASAIRAVQADSIARLVAGYKGGG-- 277

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GDFN        +    + ++                N          ID  ++ +
Sbjct: 278 IIVCGDFNDSPISYT-HRVVGEGLNDAFVESGNGFGISYNQNHFYF-----RIDNILLSK 331

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           N   +                     + SDH PI  
Sbjct: 332 NLKSYRCTV-------------DNTIKSSDHYPIWC 354


>gi|297200306|ref|ZP_06917703.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083]
 gi|197709420|gb|EDY53454.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083]
          Length = 274

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 77/312 (24%), Gaps = 73/312 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78
           A  + + S N+N L                        ++     AD++ LQE+      
Sbjct: 6   AGVLTVTSANVNGLRAAAKKGF---------------VEWLAETSADVLCLQEVRAEPQQ 50

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               V     W + ++       +                  V +  +  P        S
Sbjct: 51  LPESVRAPEGWHVVHAPAAAKGRAG-----------------VSLYTRREPDRVRIGFGS 93

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +     +  ++ G  + V  ++L S       ++             + L+   T+ 
Sbjct: 94  AEFDTSGRYVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMDEFLVHLKDLR---TRA 148

Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTID--PNDSLIRFPKE 240
                  V+ GD+N                             + ++      +      
Sbjct: 149 AADGREVVVCGDWNIAHQQADLKNWRANQKSSGFLPEERAWLSRVLEPTDGGYVDVVRSL 208

Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                        +           IDY V         ++          +   +  +R
Sbjct: 209 HPDVEGPYSWWSYRGRAFDNDSGWRIDYHVSTPGLASKAVKGFV-------ERAATHAER 261

Query: 292 LSDHCPISIDYD 303
            SDH P+++ YD
Sbjct: 262 WSDHAPVTVVYD 273


>gi|300870922|ref|YP_003785793.1| exodeoxyribonuclease [Brachyspira pilosicoli 95/1000]
 gi|300688621|gb|ADK31292.1| exodeoxyribonuclease [Brachyspira pilosicoli 95/1000]
          Length = 261

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 80/302 (26%), Gaps = 70/302 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++SWN+N +                      L  + K  DADI+ LQE     A  +
Sbjct: 3   TLKIISWNVNGIRAAYKKG---------------LLDFIKKEDADIICLQE---TKAFEE 44

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P++   I      +            ++ +A+  K     +           F+    
Sbjct: 45  QLPEDLRNIEGYQLFINPADPEI--RKGYSGVAIYTKLKPNKEIKNKFGS---KFTDREG 99

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  + L  +       + +++  +    +   N        +++    LKD         
Sbjct: 100 R-ILALEFD----DFTIFNVYFPNGGKSEEHFNYKLSFYDEMTKHMIKLKD--------K 146

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCN-------AN 248
              ++ GD N     +                I+                          
Sbjct: 147 TNVILCGDMNIAHEAIDLARPKENEKSIGFLPIERERITKFLNSGFTDTFRMFVKEGGHY 206

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                K           IDYF ++      + +      +             SDHCPI 
Sbjct: 207 SWWDMKTRSREKNVGWRIDYFFVNNEISNNIKRADILTDVL-----------GSDHCPIL 255

Query: 300 ID 301
           I+
Sbjct: 256 IE 257


>gi|297618884|ref|YP_003706989.1| exodeoxyribonuclease III Xth [Methanococcus voltae A3]
 gi|297377861|gb|ADI36016.1| exodeoxyribonuclease III Xth [Methanococcus voltae A3]
          Length = 249

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 83/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                         + K  + DI+ LQE+ + +  +++
Sbjct: 1   MKLISWNVNGIKAILQKGF---------------VDFVKQENPDILCLQEIKTNS-PSQI 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++T     +S                       +   +    D+F     R
Sbjct: 45  LDLSEYKQYWNTASKKGYSGTAIFTKQ---------------KPKNITYGMDNFPDEEGR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       ++++++  +     +  +      +   +    L +          
Sbjct: 90  -----VITAEYDNYYLVNVYTPNSQRGLTRLDYRMKWDTKFLEYLLSLNE--------SK 136

Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCN-------ANK 249
           P +  GD N     +   +         +   +                           
Sbjct: 137 PLIFCGDLNVAHKEIDLKNPKTNKKHAGFTEEERMGFDKYVENNFVDTFRLFNKESDNYT 196

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDYF    +   ++ +    + +Y            SDHCPI +
Sbjct: 197 WWSYMHNARAKNIGWRIDYFCTSNSIVNYVKKSVILDKIY-----------GSDHCPIKL 245

Query: 301 DYD 303
           + D
Sbjct: 246 ELD 248


>gi|282859608|ref|ZP_06268711.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
 gi|282587611|gb|EFB92813.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
          Length = 348

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 79/323 (24%), Gaps = 60/323 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDADI------ 68
           +  +N   L +        +           +  + T     + Q    +  D+      
Sbjct: 29  VGFYNQENLFDYTHDEGKNDYDFTPNGSYHWNEMKYTHKLANMSQVLAEMGTDVLPNVGC 88

Query: 69  --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             + L E  + + V  +  +              H +      I  A   + K   V   
Sbjct: 89  AFIGLAECENEHVVKDLVAQP---ALAQRNYQYVHIEGPDKRGIDCAFIYQPKFFTVRNT 145

Query: 127 S-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
              P +      S    R  + +   +  + + V+  HL S           +       
Sbjct: 146 KLVPYVYDLPKDSTRATRGFLTVSGTMANEHVTVIVCHLPSRGAGSYYRELGAK------ 199

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLIRFPK 239
            Q + LKD + Q ++      + GD N        +       +       +     +  
Sbjct: 200 -QVKVLKDSLLQ-EDPNCKIFVMGDMNDDPMDASMHKSLSAKAEIAEVGPNDMYNPWYNI 257

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--------- 290
                    +        D  ++  N       + ++ + Y +  I  R           
Sbjct: 258 LAKQGHGTLQYQGKWNLFDQIILSPNLLNKEGTKDYTTLKYWKSQIFRRDYLFQQEGKYK 317

Query: 291 --------------RLSDHCPIS 299
                           SDH P+ 
Sbjct: 318 GNTKRTTAGGVWLDGYSDHLPVV 340


>gi|257070188|ref|YP_003156443.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810]
 gi|256561006|gb|ACU86853.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810]
          Length = 308

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 77/328 (23%), Gaps = 71/328 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ + NIN +                 +       +      D++ LQE+ +       
Sbjct: 2   LRIATANINGIRA---------------AHRRGFGHWLAERGCDVIALQEVRAQAEKIPA 46

Query: 84  FPKNTWCIFYSTERLINHSKRDS-------NNDIHTAIAV----RKKNVRVLQQSYPLLG 132
                  +   T  L   +                +  A+          + +       
Sbjct: 47  DAFGDHHVALDTGTLPGRNGVAVLTREPPAAVRTWSGTALVGGPASGGPALAEVPASDHV 106

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPS 180
                      +   L V++    + +  ++L                        Y+  
Sbjct: 107 PLTRGLGPFVDQGRYLEVDLADAPLTIASLYLPKGGLPAHLQRPERMREAPDGGARYARK 166

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDF 224
              ++  A+ L             F++ GD N                         +  
Sbjct: 167 MGFMAAFARHLTRTRRAAAAQGRQFLLMGDLNIAHTRQDLAAWRRNQNNDGFLPEEREWL 226

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESF 275
              + P   +    +                          IDY +      +  ++   
Sbjct: 227 GAQLSPRTLVDVVRRLHPQEDGPYSWWSWLGQSFAKDAGWRIDYHLATPRLARSALRAEV 286

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   D + RG RLSDH P+ +DYD
Sbjct: 287 --------DREVRGVRLSDHAPVVVDYD 306


>gi|296090736|ref|NP_001171688.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Gallus gallus]
 gi|194722849|dbj|BAG66138.1| APEX nuclease [Gallus gallus]
          Length = 300

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 77/303 (25%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++ SWN++ L                        Q+ ++   D+V LQE          
Sbjct: 45  FKVTSWNVDGLRAWVRKGG---------------LQWLQSEAPDVVCLQETKC------- 82

Query: 84  FPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +     S    + H           ++ + +  +   +       +   D+  R  
Sbjct: 83  -GAESIPSELSQLPHLPHKFWGSAVGRSGYSGVGLLSRTAPIRVTHGIGIEEHDAEGR-- 139

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++      ++V+  ++ +     +                Q L        ++
Sbjct: 140 -------VLTAEFPSVYVVSAYVPNSGRGLNRLQYRQRWDGAFKSFLQRL--------DA 184

Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P V+ GD N               R   +     D +  +     L  F        N
Sbjct: 185 QKPVVLCGDLNVAHREIDLRNPKSNRRSPGFTQEERDAFGALLDGGFLDSFRLLYPDVPN 244

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A                  +DYF++     + L                      SDHCP
Sbjct: 245 AYTFWTYMGGARERNVGWRLDYFLLSTRLREALCDSKIR-----------SAAMGSDHCP 293

Query: 298 ISI 300
           I++
Sbjct: 294 ITL 296


>gi|227486633|ref|ZP_03916949.1| exodeoxyribonuclease III [Anaerococcus lactolyticus ATCC 51172]
 gi|227235345|gb|EEI85360.1| exodeoxyribonuclease III [Anaerococcus lactolyticus ATCC 51172]
          Length = 275

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++L+        +  + R      L+       +AD++ +QE          
Sbjct: 1   MKFISWNIDSLNAALTSDSARAIMSR------LVLDTVIKENADVIAIQETKLPYTGLSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++     +  S  D     +       K    ++ +YP +GA  +    G  
Sbjct: 55  KHIAKLAEYFPDYDYVYRSSEDPARKSYAGTMTLYKKGLKVEPTYPQIGAPCTMDFEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +   ++  +     +          L +   + L            
Sbjct: 114 -----IITLEFDNFYFTHVYTPNAGNGLTRLADRQVWDKLYADYLKSLDQ--------NK 160

Query: 204 PFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + AGDFN                   +     + +  +        F           
Sbjct: 161 PVIAAGDFNVAHEEIDLAHPENNHESPGFTDEEREGFTNLLAKGFTDTFRHIHGRVEGKY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++ +     +      +    +           DH PI
Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFLVSERIKDLITNSDMIDSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIN 274


>gi|196006483|ref|XP_002113108.1| hypothetical protein TRIADDRAFT_37773 [Trichoplax adhaerens]
 gi|190585149|gb|EDV25218.1| hypothetical protein TRIADDRAFT_37773 [Trichoplax adhaerens]
          Length = 273

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 83/287 (28%), Gaps = 33/287 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--A 79
            KV+L ++NI  L +                    L +  +    D+  +QE+   +  A
Sbjct: 12  GKVKLAAFNIQVLGKT---------KMGKPDVVADLVKILRRY--DLTLIQEIRDISGTA 60

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + ++  +       S   LI+     +++    A   R          +   G++ +   
Sbjct: 61  IQQLLTEVNKGHSRSYSMLISDRLGRTSSKEQYAFFYRSDLFSPQGNYHYDDGSESAGED 120

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R    +  +I       L I   +       EN               L D      
Sbjct: 121 TFQREPFVVKFKIRATGKQFLLIPCHASPSYAVEEND-------------ALTDVYDDAT 167

Query: 200 ES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   +I GD N   +Y+ +++  +  +                   + +       
Sbjct: 168 SRLGETNAIILGDLNADCSYVTSSEWSYIRLWTQSRFNWIIPNSADTTTKSTHCAYDR-- 225

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDY 302
            + ++        +  +     Y+ +   S  +   +SDH PI ++ 
Sbjct: 226 -FVLVGSRMQSDYVSGTAKVFRYDTEYGLSYSETTAVSDHYPIEMEL 271


>gi|158321340|ref|YP_001513847.1| exodeoxyribonuclease III Xth [Alkaliphilus oremlandii OhILAs]
 gi|158141539|gb|ABW19851.1| exodeoxyribonuclease III Xth [Alkaliphilus oremlandii OhILAs]
          Length = 252

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 76/303 (25%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +L+SWN+N +                         Y K +DADI  +QE     A     
Sbjct: 3   KLISWNVNGIRACVTKGF---------------LDYFKEVDADIFCIQE-SKLQAGQIDL 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++      +          +  A+  K   +        G          R 
Sbjct: 47  ELEGYHQYWNYAEKKGY----------SGTAIFTKEEPISV----FYGIGIEEHDKEGR- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +     +++ ++  +     +  +               L        +   P
Sbjct: 92  ----VITLEFGDYYMVTVYTPNSQQKLARLDYRMTWEDCFRSYLNNL--------DKQKP 139

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GD N   N                       +     N  +  +      R  A  
Sbjct: 140 IIVCGDLNVAHNEIDLKNPKSNRKNAGFSDEERAKFTEFLGNGYIDTYRYFYPDREGAYT 199

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDYF + +     L+     + +             SDHCP+ +
Sbjct: 200 WWSYMFNARANNAGWRIDYFCVSERLQDKLVSADIHDHIL-----------GSDHCPVEL 248

Query: 301 DYD 303
             +
Sbjct: 249 VIN 251


>gi|313904223|ref|ZP_07837602.1| exodeoxyribonuclease III Xth [Eubacterium cellulosolvens 6]
 gi|313471025|gb|EFR66348.1| exodeoxyribonuclease III Xth [Eubacterium cellulosolvens 6]
          Length = 250

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 75/304 (24%), Gaps = 79/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                        +  + LDAD   +QE          
Sbjct: 1   MKFISWNVNGLRACMKKDFD---------------KTFRELDADFFCIQESKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           +    W  +++      +          +  A+  K   +           D   R    
Sbjct: 45  YCPEGWNEYWNYAEKKGY----------SGTAIWAKKPALQVTYGIGEEEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                         + ++ +  +   
Sbjct: 91  -----VITLEYDTFFLVTVYTPN-------SQDGLKRLDYRMTWEDSFRAYLGK-LDEKK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                           +  +        F           
Sbjct: 138 PVIVCGDLNVAHEEIDLKNPKTNRKNAGFTDEERGKFTELLDAGFTDSFRYLHPEDVE-Y 196

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  +   + + Q    + ++            SDHCP+ 
Sbjct: 197 SWWSYRFHAREKNAGWRIDYFLTSERVKEKIEQAVIHQEIF-----------GSDHCPVE 245

Query: 300 IDYD 303
           +D  
Sbjct: 246 LDIS 249


>gi|302497149|ref|XP_003010575.1| hypothetical protein ARB_03276 [Arthroderma benhamiae CBS 112371]
 gi|291174118|gb|EFE29935.1| hypothetical protein ARB_03276 [Arthroderma benhamiae CBS 112371]
          Length = 350

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 72/296 (24%), Gaps = 30/296 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82
            R+++ NI   +             R       L  Y   L+ +  V LQE         
Sbjct: 68  FRILTHNIRYATTSPSAGEQP-WSVRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVTDV 125

Query: 83  VFP--------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +           + W  +         +   S      A+   ++   V     P + +K
Sbjct: 126 LAGLNSRPHAQADEWAFYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPSVPSK 185

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             +  A  R     +         VL ++                      + A+ +   
Sbjct: 186 -GWDAASIRIVTIGVFNHRASNTTVLAMNTHL----------DDQGSKSRFESAKLILSL 234

Query: 195 ITQKKESLVPF---VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNA 247
           I +            +AGDFN   +     +         D+  + P       +     
Sbjct: 235 IQKYLARHPEVKGNFLAGDFNSAESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTG 294

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    IDY ++   +    I            +        SDH  +  D  
Sbjct: 295 FDGKTKGSRIDYVMVGPQSSSASIP-FAVNGYAVMPNRFDNRIYNSDHRAVVADVT 349


>gi|229828142|ref|ZP_04454211.1| hypothetical protein GCWU000342_00199 [Shuttleworthia satelles DSM
           14600]
 gi|229792736|gb|EEP28850.1| hypothetical protein GCWU000342_00199 [Shuttleworthia satelles DSM
           14600]
          Length = 277

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 85/307 (27%), Gaps = 58/307 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +SWNI++L+     +  +  +         + +    +  D   +QE     A    
Sbjct: 1   MRFISWNIDSLNAALTGTSARAQMS------AAVLEKIAGMRPDYFAIQETKLPEAGPNQ 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAG 141
                    +S       S R      +  + +  R+    VL+ + P +GA D+    G
Sbjct: 55  KQMEIIEKLFSDYDCHYISSRPPARKGYAGVMILARRDAGPVLEVTKPSIGAPDTMDVEG 114

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++ I     +   ++  +        +      +  +     L        ++
Sbjct: 115 R------ILTIETADFFFTTVYTPNAGDGLRRLDDRQQWDARYADYLAGL--------DA 160

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P +  GD+N                         + +  +        F        +
Sbjct: 161 RKPVIACGDYNVAHEEIDLKNPDANHMSAGFTDQEREGFTRLLDRGFADSFRCLHRDLAD 220

Query: 247 ANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           A      +            IDYF++       +      +    +           DHC
Sbjct: 221 AYSWWAQRVKSSKINNSGWRIDYFLVSDRILNRVNSSEMIDSGARQ-----------DHC 269

Query: 297 PISIDYD 303
           P+ ++ D
Sbjct: 270 PLLLEID 276


>gi|262198476|ref|YP_003269685.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
 gi|262081823|gb|ACY17792.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
          Length = 244

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 72/283 (25%), Gaps = 46/283 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-AK 82
           +R++++NI+                        +R    + D D+  LQE+        +
Sbjct: 3   LRVLTYNIHKCIGGVDRRYNP----------ERVRDTIAHYDPDVALLQEVDHLVPRSNR 52

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-GAKDSFSRAG 141
               +                           A+  +      ++  L  G +   S   
Sbjct: 53  DRQVDVLGDLLGYRHRTYFPNVRVRGGGEYGNAILSRYPLTHTRNIDLTVGLRKRRSVLH 112

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW-LKDWITQKKE 200
            R  V L    + + + V ++HL                      Q Q  L         
Sbjct: 113 ARYRVRLPRSRSTRTVHVFNMHLGLAGG-------------ERKLQLQRFLDSHPFTGFH 159

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++ GD N            W T+ P   L    +                 +D  
Sbjct: 160 QHTPVIVGGDLND----------VWGTLGPKFLLPAGFRRMPKSPRTFPAYAPMRALDGI 209

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +  +A    +Q              +  +  SDH P+  D +
Sbjct: 210 YVRGSAEMRKLQRG----------QIAVAREASDHLPLIADIE 242


>gi|289621687|emb|CBI51598.1| unnamed protein product [Sordaria macrospora]
          Length = 289

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 79/288 (27%), Gaps = 23/288 (7%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-K 82
           +R VS+NI   + ++ V   +    R       L       D+  + LQE+     +  +
Sbjct: 16  IRFVSFNIRY-ATKDPVPGEQPWTTRRPRLCAQLNFLTSGHDSTFLCLQEVLFLQLMDIQ 74

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                +W       +    +   S           +          P       +     
Sbjct: 75  DSLGPSWGHIGRGRKDGKLAGEFSPIFFRVDQWDCEDWKTYWLSETPE-KPSFGWDAVLE 133

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R               V+ +      F    +     S  L+    +   +W    ++S 
Sbjct: 134 RIVTVGSFRHKTTGKGVIVMSTH---FDHRGQVAREESSKLI---LKLASEWRQTNRDSD 187

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP------ 256
            P V+ GD N     L             D+   FP E               P      
Sbjct: 188 PPLVLGGDLNSTPTDLAYKTLTSSDSGLQDASAVFPDELKYGNRKITYTSFGEPDEKAKT 247

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDYD 303
           ID+  +           +F  +L+    +    G  LSDH P+ +D +
Sbjct: 248 IDFLFV-------QRPPTFKLMLFGILSNKFDDGVFLSDHRPVFLDVE 288


>gi|300708619|ref|XP_002996485.1| hypothetical protein NCER_100420 [Nosema ceranae BRL01]
 gi|263405112|sp|C4V7I7|CCR4_NOSCE RecName: Full=Probable glucose-repressible alcohol dehydrogenase
           transcriptional effector homolog; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|239605791|gb|EEQ82814.1| hypothetical protein NCER_100420 [Nosema ceranae BRL01]
          Length = 476

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 78/296 (26%), Gaps = 23/296 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
                ++NI +      +      V         +     +++ DI+ LQE+ +YN    
Sbjct: 170 TFSCGTYNILSNYSAVRLGYPPTWVLNPDYRKENILHNICSINVDILCLQEVETYNYEDF 229

Query: 83  VFPKNTWCIFYSTERLINHSKR---DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +      YS+        +   DS +    A   +K   ++ +       +K     
Sbjct: 230 YKDQLELRCEYSSVFQPKGRSKNLTDSKSVDGCATFWKKSKFKIKENLVIDFYSKFINDY 289

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKS-----FCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             N+    +        I ++ I   S        ++           +   QA  L + 
Sbjct: 290 RFNKNINLVSRYGKKDNIALISIFEISQTKQTLIVVNVHLYWDPEYEDIKFVQAIILLEE 349

Query: 195 ITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------- 245
           + +  +       V+ GDFN   N    +     ++   +                    
Sbjct: 350 LEKVSKCYKNPSIVLLGDFNSLQNSSVYSFITQNSVSNTNLCKYNIGFIPGHFLKLSDAY 409

Query: 246 ------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   N     K  ID+           I  +      ++          SDH
Sbjct: 410 LSEENDFTNFTPTFKGVIDFIFYSDTLELRSILSTIENEYCDQVVGLPNIHFPSDH 465


>gi|298345296|ref|YP_003717983.1| putative exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063]
 gi|315655715|ref|ZP_07908613.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333]
 gi|298235357|gb|ADI66489.1| possible exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063]
 gi|315489779|gb|EFU79406.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333]
          Length = 294

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 72/283 (25%), Gaps = 48/283 (16%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            + +N D+D++ LQE+ +     +      W +   + R+   +         +      
Sbjct: 21  DWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWSCRVKGRAGVALGARRDSD----W 76

Query: 119 KNVRVLQQSYPLLGAK--DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +  ++ +   P L A+          R     +    G    ++  +L S       +  
Sbjct: 77  EIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLVSAYLHSGELRTEKQKQ 136

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWK-------- 226
                  + ++ Q L         S  P   +I GDFN         +            
Sbjct: 137 KIAYLHRVGERVQQLSARAMAGVGSDTPQEALICGDFNIVRTARDIKNWKSNHNKTSGVM 196

Query: 227 ----TIDPNDSLIRFPKEKDSRC------------NANKNLRNK---------IPIDYFV 261
                             K   C                    +           +DY +
Sbjct: 197 DEEIAFLDAWMADTLSGSKGLPCVDVGRALVGDTDGPYTWWSWRGKAYDNNAGWRLDYHM 256

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       +            +   R +DH P+++ YDF
Sbjct: 257 ATPGLAGQAQSAAV-------YRAPAYDARFTDHAPVTVTYDF 292


>gi|283782977|ref|YP_003373731.1| putative exodeoxyribonuclease III [Gardnerella vaginalis 409-05]
 gi|283441148|gb|ADB13614.1| putative exodeoxyribonuclease III [Gardnerella vaginalis 409-05]
          Length = 288

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 75/285 (26%), Gaps = 45/285 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN--- 108
           ++   +  ++     D+  +QE+ +               + ++E ++N  K D+     
Sbjct: 15  AERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSENIVNSIKNDNFTYTN 74

Query: 109 -----DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                     +A+      V ++       +D  S    R     +    G +I +  ++
Sbjct: 75  EVCRVKGRAGVALVTSLPVVEKRYGLPGLNEDVDS---GRWVETDVRTPEGYEITIASVY 131

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------ 217
           + +    D            L      L +            ++ GDFN           
Sbjct: 132 VHAGNVDD--PQKMQQKFRFLDTMLIRLGELRNIAASGGNQAILCGDFNIAHTSLDIKNA 189

Query: 218 ----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPID 258
                             + I+  + +                   +           +D
Sbjct: 190 KANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAFDNNVGWRLD 249

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y        +           +  D  +S   R SDH P+SI YD
Sbjct: 250 YQFATPEIAESARG-------FVIDRAESYDARWSDHAPLSIKYD 287


>gi|229826178|ref|ZP_04452247.1| hypothetical protein GCWU000182_01550 [Abiotrophia defectiva ATCC
           49176]
 gi|229789048|gb|EEP25162.1| hypothetical protein GCWU000182_01550 [Abiotrophia defectiva ATCC
           49176]
          Length = 357

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 29/305 (9%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++ ++ +SWN+               G  +   +      +   +    + LDAD++ LQ
Sbjct: 56  SKDIKFISWNVGYCGLGKSADFFMDGGKKVVSQTKSEVDENIDKITDKLRQLDADVILLQ 115

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+   +  +    +                   S      A+ +      +      ++ 
Sbjct: 116 EVDRKSYRSYDMDEEKL------IGDKFSDMISSFAINLKALFIPYPIPPIRNVEAGIMS 169

Query: 133 AKDSFSRAGNRRAVELLVEINGKKI----WVLDIHLKSFCFLD-----SLENTYSPSCSL 183
                + +  R ++ +  +   +       +L   L            +L      S   
Sbjct: 170 LSKLKAESAERVSLPVPFKWPERTCNLKRCLLVEKLPISGSDKKLVVINLHLEAYDSGEG 229

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
              Q + L D + ++ +     V  GDFN+  +    ++                K+ + 
Sbjct: 230 KVAQTKALLDIMEKEYKEGNYVVAGGDFNQSFSSADLSEFEVGNKGLWKPGRIEAKDFEE 289

Query: 244 RCNANKNLR--NKIPIDYFV--MDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCP 297
             N   +        +D      D     ++I    +         K+ G     SDH P
Sbjct: 290 NFNLYMDASVPTCRSLDRAYDKADNKFQYYVIDGFITSKNVEVISQKTIGLDFENSDHNP 349

Query: 298 ISIDY 302
           I +  
Sbjct: 350 IEMVI 354


>gi|28377662|ref|NP_784554.1| exodeoxyribonuclease III [Lactobacillus plantarum WCFS1]
 gi|254555843|ref|YP_003062260.1| exodeoxyribonuclease III [Lactobacillus plantarum JDM1]
 gi|28270495|emb|CAD63397.1| exodeoxyribonuclease III [Lactobacillus plantarum WCFS1]
 gi|254044770|gb|ACT61563.1| exodeoxyribonuclease III [Lactobacillus plantarum JDM1]
          Length = 254

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                             LDAD   +QE     A    
Sbjct: 1   MKLISWNVNGLRAAVKHGF---------------VTTFNELDADFFCVQETK-LQAGQIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K+  +       +   D   R    
Sbjct: 45  LDFPGYYQYWN----------YAERKGYSGTAIFTKHEPLNVTYGIGVPEFDDEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +VL  +  +        +               L         +  
Sbjct: 91  -----VITLEYADYYVLTCYTPNSGGELKRLDYRQQWEDAFLTYINSL--------SANK 137

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N     +   +                 +  +        F      + +  
Sbjct: 138 PLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERTKFDRLLAAGYTDTFRHFYPDQTDIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  Q     L+       ++            SDHCP+ 
Sbjct: 198 SWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARIHNEIF-----------GSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDI 249


>gi|313201147|ref|YP_004039805.1| endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688]
 gi|312440463|gb|ADQ84569.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688]
          Length = 241

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 81/283 (28%), Gaps = 53/283 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+ +NI+     +G             D   +    + LD D   +QEM +  +    
Sbjct: 1   MRLLCFNIHGGRSLDG-----------QRDLQRIHHLMQRLDIDAGVIQEMETRPS-RGG 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +   +                        +  +   V      L+   ++      R
Sbjct: 49  QPDDVERLAGPERPFHLICPSMLEGQGWYGNLIVSRYPIVRG----LIHNLETRPSLEPR 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-L 202
            A + L+      + V+  HL             S S      +A+ L   I   +E   
Sbjct: 105 MAADALIAGPHGNLRVIGTHL-------------SLSIYERRSEARNLIRLIQAVEEETK 151

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNKIPIDYFV 261
            P ++ GD N             + +D               C     +L   + +D   
Sbjct: 152 NPLLLMGDINEWQ----RPSALLRFLDG--------HLTPVPCKATFPSLCPVLRLDRVW 199

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      E      +      +  +RLSDH PI I+ ++
Sbjct: 200 Y--------EAEGIKITAHRIH--GNDIRRLSDHLPIVIELEW 232


>gi|228471546|ref|ZP_04056321.1| exodeoxyribonuclease III [Capnocytophaga gingivalis ATCC 33624]
 gi|228277122|gb|EEK15802.1| exodeoxyribonuclease III [Capnocytophaga gingivalis ATCC 33624]
          Length = 253

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 88/302 (29%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+N+N +                        Q+ K  D D++ LQE+       K 
Sbjct: 1   MKIFSYNVNGIRAAMSKGF---------------TQWLKAADPDVICLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            H    +    ++ +A+  K      +    +   D   R    
Sbjct: 39  LESQIDLPALEEIGYTYHYFHSAEKKGYSGVAILSKTAPTQVEVGAGIDYMDREGRI--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + ++ ++L S   +D              Q     +++I + K++  
Sbjct: 96  ------LRADYGDLSIMSLYLPSGTNID--------RLDHKLQFMADFQNYINELKKTHP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF------------WKTIDP--NDSLIRFPKEKDSRCNANK 249
             +I GD+N     +  +D               K +D       I   +      +   
Sbjct: 142 NLIICGDYNICHEAIDIHDPVRNANVSGFLPVERKWLDDFLKSGFIDSFRFFHKEPHNYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++ Q     L++ +                + SDHCPI +
Sbjct: 202 WWSYRANARANNKGWRIDYCLVAQPLENRLLRAAIL-----------PEAKHSDHCPILV 250

Query: 301 DY 302
           + 
Sbjct: 251 EI 252


>gi|170093872|ref|XP_001878157.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646611|gb|EDR10856.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 617

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 88/324 (27%), Gaps = 68/324 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAV 80
            V    +N+  +                 +    +  +  N     DI+F+QE+   +  
Sbjct: 305 TVTFGDYNVQNMPPTG-------------AHLPAVAAHIVNYLKTPDIMFIQEVQDNSGA 351

Query: 81  AK-----------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
                                  N    F S   +          +I  A   R + + +
Sbjct: 352 KDDGVVDANVTLTNLVNSIASLSNVTYKFASINPIDGQDGGVPGGNIRVAYLYRPEKLEL 411

Query: 124 LQQS----------------------YPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWV 159
           +  S                       P      + +   +R+ +     +      ++ 
Sbjct: 412 VGGSPAGGSLDKTVVQGTLFNPKLNFNPGRIDPTNTAWNSSRKPLVAHWAVGPLKSSLFT 471

Query: 160 LDIHLKSFCFLDSLENTYSPSC----SLLSQQAQWLKDWITQKKESL--VPFVIAGDFNR 213
           +++HL S     +      P         + Q   +  +I    +       VIAGDFN 
Sbjct: 472 VNVHLASKGGSTTTNGDARPPVNSPIQARTNQISTIATFIKSLLQKNPLANIVIAGDFNE 531

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
            I        F   +   D     P+ +     +    +N   +D+  +       L + 
Sbjct: 532 FIQTRSVYKPFTPILSDIDDAAGIPELER---YSYVYDQNSEQLDHAFIS--LALRLKKV 586

Query: 274 SFSEILYNEDDIKSRGKRLSDHCP 297
            F  I  N     +   ++SDH P
Sbjct: 587 EFEHIHANT-WAPNSKSQVSDHDP 609


>gi|170721818|ref|YP_001749506.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida W619]
 gi|169759821|gb|ACA73137.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida W619]
          Length = 261

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 82/291 (28%), Gaps = 52/291 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74
           +   ++ +++ N++                        LR+  +  DAD+VFLQE+    
Sbjct: 16  TAVHRLNVLTINVHKGFTALNRRF----------ILPELREAVRATDADLVFLQEVHGSH 65

Query: 75  GSYNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             +      +P+     F +        + +           A+  K   V  ++  +  
Sbjct: 66  EHHALRHPAWPETPQYEFLADSMWPQFAYGRNAIYPHGDHGNALLSKFPIVEHRNLDVSI 125

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             +       R  +   +++ G +  V  + +                 +   +Q     
Sbjct: 126 HGN-----EQRGLLHCRLDVPGHE-SVHAVCVHLGLR-----------EAHRQRQVSL-L 167

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             +     +  P ++AGDFN               +     +  F +   S   +     
Sbjct: 168 FDLLDSLPAEAPVIVAGDFNDW-------RLKADAVLSQRLVEAFGEHFGSPARSFPARL 220

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +D   +           S                 LSDH P++ + +
Sbjct: 221 PLLRLDRIYLRNAKPSKAQVLS-----------HYPWSHLSDHAPLAAEIN 260


>gi|289771097|ref|ZP_06530475.1| exodeoxyribonuclease III [Streptomyces lividans TK24]
 gi|289701296|gb|EFD68725.1| exodeoxyribonuclease III [Streptomyces lividans TK24]
          Length = 274

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 77/308 (25%), Gaps = 71/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + S N+N L                        ++     AD++ LQE+         
Sbjct: 9   LTVTSVNVNGLRAAAKKGF---------------VEWLAGTSADVLCLQEVR-------- 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             +      ++      H             +++  +      +        D+  R   
Sbjct: 46  -AEPHQLPDHAGAPEGWHVTHAPAAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGR--- 101

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                +  ++ G  + V  ++L S       ++             + L++         
Sbjct: 102 ----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLAYLKELRERA---AAEG 152

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDP--NDSLIRFPKEKDSR 244
              V+ GD+N                         +   + +DP     +          
Sbjct: 153 REVVVCGDWNIAHREADLKNWRANKKNSGFLPEEREWLGRVLDPAEGGYVDVVRALHPDV 212

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY V         ++          +   +  +R SDH
Sbjct: 213 EGPYSWWSYRGRAFDNDAGWRIDYHVSTPGLAAKAVKGYV-------ERAATHAERWSDH 265

Query: 296 CPISIDYD 303
            P+++ YD
Sbjct: 266 APVTVVYD 273


>gi|284028360|ref|YP_003378291.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283807653|gb|ADB29492.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 273

 Score = 76.9 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 81/301 (26%), Gaps = 55/301 (18%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNAV 80
           R+++ N+                      + L+ +  + L  D+V LQE+    GS + +
Sbjct: 4   RVLTLNVQNDVGDP-------------RRFRLINEELRRLSPDLVALQEVCYPAGSNDQL 50

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A++          + +R +     +      TAIA R  +       +   G +      
Sbjct: 51  AELLEGTG-LTHRTHQRDVLPDLPELFRHDGTAIATRHPHRVAEVLEHRGTGVRGDPHWW 109

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                + + V++      +       +                  +QA  +   +  +  
Sbjct: 110 ----TLAVTVDLGPVGEVLAITPTTPWQLDHEY---------ARERQALDIAA-LDARHR 155

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----- 255
           + +P V+AGDFN   +                S+                          
Sbjct: 156 TALPTVLAGDFNATPDSASIRFLSGHQSLDGTSVHFHDAWTTRGEGPGHTWTTANPLARE 215

Query: 256 -------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         +DY  +         Q +      +  D+      LSDH  +  D 
Sbjct: 216 EIATLIGQSPHHRRLDYIFVGSRHAHPDTQATI-----DTVDLVGVNPPLSDHYGLVADL 270

Query: 303 D 303
            
Sbjct: 271 T 271


>gi|256851697|ref|ZP_05557085.1| exodeoxyribonuclease III [Lactobacillus jensenii 27-2-CHN]
 gi|260661585|ref|ZP_05862497.1| exodeoxyribonuclease III [Lactobacillus jensenii 115-3-CHN]
 gi|282934219|ref|ZP_06339496.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1]
 gi|256615655|gb|EEU20844.1| exodeoxyribonuclease III [Lactobacillus jensenii 27-2-CHN]
 gi|260547642|gb|EEX23620.1| exodeoxyribonuclease III [Lactobacillus jensenii 115-3-CHN]
 gi|281301693|gb|EFA93960.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1]
          Length = 275

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 81/303 (26%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++L+        +    R       +         DI+ +QE            
Sbjct: 3   LISWNIDSLNAALTSDSARAQKTRH------VLTQIAEKKPDILAIQETKLRATGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                  +     +  S  +     +       KN      +YP +GA D+    G    
Sbjct: 57  AEILAKLFPDYEYVWRSSEEPARKGYAGTMYLYKNTLEPVVTYPTIGAPDTMDFEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +   + +V  ++  +                   +  Q L        +   P 
Sbjct: 114 ---IITLEFPEYFVTQVYTPNAGGELKRLGDRQGWDKKYIEYLQKL--------DKEKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +        F K   +       
Sbjct: 163 LASGDYNVAHEEIDLKHPENNHHSAGFTDEERADFTELLSTGFTDSFRKIHGNIPEVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY++        + +           ++   G+R  DHCPI +
Sbjct: 223 WAQRIKTAKANNSGWRIDYWLTSNRIADKIKKS----------EMMDTGERA-DHCPIVL 271

Query: 301 DYD 303
           + D
Sbjct: 272 EID 274


>gi|283955677|ref|ZP_06373170.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792902|gb|EFC31678.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 1336]
          Length = 252

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 81/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 1   MKLLSWNVNGLRAICDKNA---------------LDWIAQEKIDFIGFQEI---KAHEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 43  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +          +   +       ++ +  +   
Sbjct: 91  -----VLEHRFKNIALFNIYFPNGQKDEER-------LNFKMKFYADFLAYLDKLLKDGF 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANVNTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|240277984|gb|EER41491.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus H143]
          Length = 330

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 84/303 (27%), Gaps = 28/303 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  +RL+++N+   ++  G    K   +R  +  T +       D   V +QE+ 
Sbjct: 36  PFPNKSLSLRLMTFNVRYAAKPSGN--EKAWSERRGNLITQVAYEMGATDNVFVGMQEVL 93

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130
                  V   N+       +       RD    +  ++ I  RK    +++        
Sbjct: 94  HNQLEDIVNGLNSHPSSGGNDWAYIGVGRDDGKQSGEYSPILYRKSLWELVEMDTKWLSE 153

Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                     A NRR V + V  N +   +  +                         ++
Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRNKRTKAMALVMNTHL---------DHQVSEARLHGSE 204

Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +   I   K            ++ GDFN +             I  +       K    
Sbjct: 205 LILKLIGDYKNKRQYKCKLTGVILTGDFNSEEGQEAYKVVTESKILVDPVKKFGDKNIYG 264

Query: 244 RCNANKNLRN---KIPIDYFVMD-QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298
                    +      IDY  +   N   +  + ++    Y    +    G   SDH  +
Sbjct: 265 NRKTFTGFDSEVGLTRIDYVFVGQGNLCGWGDKGTWDVNRYAVLPNKFDDGIFFSDHRAV 324

Query: 299 SID 301
             D
Sbjct: 325 VAD 327


>gi|148539953|ref|NP_079994.2| deoxyribonuclease-1-like 2 precursor [Mus musculus]
 gi|59797962|sp|Q9D1G0|DNSL2_MOUSE RecName: Full=Deoxyribonuclease-1-like 2; AltName:
           Full=Deoxyribonuclease I-like 2; Short=DNase I-like 2;
           Flags: Precursor
 gi|12834394|dbj|BAB22893.1| unnamed protein product [Mus musculus]
 gi|76779307|gb|AAI06189.1| Dnase1l2 protein [Mus musculus]
          Length = 278

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 85/287 (29%), Gaps = 35/287 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A  +R+ ++N+ +  + +       SV         + Q       DI  +QE+   +  
Sbjct: 19  ATALRIGAFNVQSFGDNKVSDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 67

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           AV+ +  +      +    + +                RK    V   +Y     +D   
Sbjct: 68  AVSLLMEQINRVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVASV-VSTYQYPDPED--- 123

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A +R    +   +           L       +     +   +L       +  W    
Sbjct: 124 -AFSREPFVVKFSVPS----CATKELVLIPLHAAPHQAVAEIDALYDVYLDVIDKW---- 174

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    +  GDFN    Y+  +D     +  ++       +       N +       D
Sbjct: 175 --NTDDMLFLGDFNADCKYVKAHDWPSIRLRSSEVFKWLIPDSADTTVGNSDCAY----D 228

Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             V+      + L   S S   + E+    + + L  SDH P+ + +
Sbjct: 229 RIVVSGAHLRRSLKPHSASVHNFQEEFDLDQTQALAISDHFPVEVTF 275


>gi|21221611|ref|NP_627390.1| exodeoxyribonuclease [Streptomyces coelicolor A3(2)]
 gi|6138859|emb|CAB59670.1| putative exodeoxyribonuclease (EC 3.1.11.2) (putative secreted
           protein) [Streptomyces coelicolor A3(2)]
          Length = 274

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 78/308 (25%), Gaps = 71/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + S N+N L                        ++     AD++ LQE+         
Sbjct: 9   LTVTSVNVNGLRAAAKKGF---------------VEWLAGTSADVLCLQEVR-------- 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             +      ++      H             +++  +      +        D+  R   
Sbjct: 46  -AEPHQLPDHAGAPEGWHVTHAPAAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGR--- 101

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                +  ++ G  + V  ++L S       ++             + L++    +    
Sbjct: 102 ----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLAYLKELRERAAAQ---G 152

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDP--NDSLIRFPKEKDSR 244
              V+ GD+N                         +   + +DP     +          
Sbjct: 153 REVVVCGDWNIAHREADLKNWRANKKNSGFLPEEREWLGRVLDPAEGGYVDVVRALHPDV 212

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY V         ++          +   +  +R SDH
Sbjct: 213 EGPYSWWSYRGRAFGNDAGWRIDYHVSTPGLAAKAVKGYV-------ERAATHAERWSDH 265

Query: 296 CPISIDYD 303
            P+++ YD
Sbjct: 266 APVTVVYD 273


>gi|148643539|ref|YP_001274052.1| exodeoxyribonuclease, XthA [Methanobrevibacter smithii ATCC 35061]
 gi|222444963|ref|ZP_03607478.1| hypothetical protein METSMIALI_00579 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350463|ref|ZP_05975880.1| exodeoxyribonuclease III [Methanobrevibacter smithii DSM 2374]
 gi|148552556|gb|ABQ87684.1| exodeoxyribonuclease, XthA [Methanobrevibacter smithii ATCC 35061]
 gi|222434528|gb|EEE41693.1| hypothetical protein METSMIALI_00579 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861246|gb|EFC93544.1| exodeoxyribonuclease III [Methanobrevibacter smithii DSM 2374]
          Length = 257

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 88/308 (28%), Gaps = 80/308 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--V 80
            V+LVSWN+N +        + +                 + +ADI+  QE+ +      
Sbjct: 2   SVKLVSWNVNGIRAASKKPEFWDW--------------FNSTNADIINFQEVRATEDSIP 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+     +  +++      +S   + + I     VR   V  L +              
Sbjct: 48  EKLTDVAGFNSYFNEAEKKGYSGVGTFSKIKPENVVRGLGVEALDREGR----------- 96

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   ++ +      + +I+  +        +     C+        L D +   K 
Sbjct: 97  --------VLRLEYSDFTLFNIYFPNSGMNAKRLDYKIDFCN-------ALLDLLEDLKN 141

Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                +I GD N   N                 +   +     +      +   +  D  
Sbjct: 142 QGQNLIITGDVNIAHNPIDVYNPANCEGKSGYLIEEREWLDDLLASG--FVDTFRMFDDS 199

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +       +           +DYF +++     +   +    ++            SDH
Sbjct: 200 GDNFTWWSYRTRARDRNAGWRLDYFFVNEEFKNKVKSATIKNDVF-----------GSDH 248

Query: 296 CPISIDYD 303
           CP++++ D
Sbjct: 249 CPVTLELD 256


>gi|159042592|ref|YP_001531386.1| exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12]
 gi|157910352|gb|ABV91785.1| exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12]
          Length = 262

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 77/307 (25%), Gaps = 73/307 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + +WNIN                R  +D   + +  ++   D++ LQE  S      
Sbjct: 2   SITIATWNIN--------------SVRLRADL--VARLLRDEAPDVLCLQECKSPVD--- 42

Query: 83  VFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                   I   T     +          +  +A+  +           +G  D+     
Sbjct: 43  -------KIPLETFAARGYGHMVARGQKGYNGVAILSRLPLEDAGHRDFVGKGDARH--- 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               V   +E     + + + ++ +    D  +   +            ++ W T     
Sbjct: 93  ----VAARLENG---LTIHNYYVPAG--GDVPDRDVNEKFGHKLDFLAEMRAWFTDTAPE 143

Query: 202 LVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               V+ GD N                  ++     D ++T     + +   +       
Sbjct: 144 KS--VLVGDLNIAPREDDVWSHKQLLKVVSHTPIEVDTFETTREAGNWVDVTRADIPEGQ 201

Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+              + +              + SDH 
Sbjct: 202 LYSWWSYRARDWSAADKGRRLDHVW-------ASADIAAAAHGSRILREVRGWDQPSDHA 254

Query: 297 PISIDYD 303
           P+   +D
Sbjct: 255 PVFASFD 261


>gi|325919422|ref|ZP_08181448.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
 gi|325550088|gb|EGD20916.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
          Length = 326

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 79/296 (26%), Gaps = 70/296 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ ++N+N                   S    L ++ +    DIV LQE+    A  + F
Sbjct: 7   KIATFNVNG----------------IHSRLPHLLEWLQREQPDIVGLQEL---KATQEAF 47

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P+          R   +            +A+  +       + P+   +      G+R+
Sbjct: 48  PE-------QAIRDAGYGVIWQGEKSWNGVALLAR------GADPVEIRRGLPWDPGDRQ 94

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           +  L   I+G  + V  ++L +       +  Y  +        Q L        E   P
Sbjct: 95  SRYLEAAIHG--VVVACLYLPNGNPQPGPKFDYKLA------WFQRLIRHAKTLVELPHP 146

Query: 205 FVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNANK 249
             + GDFN         D                 +  +                     
Sbjct: 147 VALIGDFNVVPTDADIYDPKGWRKDALLQPESRQAYAALLQQGWTDSLLAVHGDTPIYTF 206

Query: 250 NLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
               +          ID+ +++      L            D      ++ SDH P
Sbjct: 207 WDYFRQHFARDRGLRIDHLLLNCTLAPGLQDAGV-------DKWVRALEKASDHAP 255


>gi|258545737|ref|ZP_05705971.1| endonuclease/exonuclease/phosphatase family protein
           [Cardiobacterium hominis ATCC 15826]
 gi|258518982|gb|EEV87841.1| endonuclease/exonuclease/phosphatase family protein
           [Cardiobacterium hominis ATCC 15826]
          Length = 239

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 71/288 (24%), Gaps = 58/288 (20%)

Query: 24  VRLVSWNIN-------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R++S+NI         LS                     +  Y      D+V LQE+  
Sbjct: 1   MRILSYNIQAAINARSYLSYTWQWHRQILPGPAKRKTLARIAAYISQF--DLVCLQEIDL 58

Query: 77  YNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                            S        + R           +  K       + PL     
Sbjct: 59  GGLRNGFLNHVEQLRDLSGLPYALAQTNRRLGKLSLHGNLILSKTPLREVLNQPLPS--- 115

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              R   R  +   VE     + V ++HL                      Q +++++ +
Sbjct: 116 ---RIPGRGVLAAAVESTHGALVVANVHLSLGALDQHR-------------QLRFIRNRL 159

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
               +     +I GD+N   +         + +  +                  + + + 
Sbjct: 160 AAWPD----VLITGDYNCTPDAPQ-----LRILAEHGYRSLGDASP-----TFPSWKPQK 205

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +D+  +              +               SDH P  I+ D
Sbjct: 206 ALDHAFLKGGLTARSHVSPQRD---------------SDHLPRVIELD 238


>gi|325690669|gb|EGD32670.1| exodeoxyribonuclease [Streptococcus sanguinis SK115]
          Length = 275

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 82/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  +    G  
Sbjct: 55  KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E +G   +V  ++  +        +         ++    L            
Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDVKYAEYLATLDQ--------QK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|319787682|ref|YP_004147157.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1]
 gi|317466194|gb|ADV27926.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1]
          Length = 267

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 77/297 (25%), Gaps = 70/297 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L ++N+N +                      L  + +    D+V LQE+ + +     
Sbjct: 9   LKLATFNVNGIGP----------------RLPHLLLWLEREQPDVVALQELKARDEA--- 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  + V  ++    L G +   S + +R
Sbjct: 50  -------FPAAEIEAAGYGAIWHGEHRWNGVALLGRGVTPIESRRGLPGDR---SDSQSR 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       + V  ++L +       +  Y        +    L   +    +   
Sbjct: 100 YIEAAV-----HGVVVGALYLPNGNPQPGPKFDYK------LKWMARLARHVATLVDLPH 148

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GDFN         D                 +  +          +         
Sbjct: 149 PAVLMGDFNVIPTDEDVYDPKSWKRDALIQPEVREAYAKLLAQGWTDALREVYGEERVYT 208

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                +          ID+ +++      L +          D      ++ SDH P
Sbjct: 209 FWDYFRQHFERDRGLRIDHLLLNPALAPGLEEAGV-------DRWVRALEKPSDHAP 258


>gi|227539509|ref|ZP_03969558.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240574|gb|EEI90589.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 348

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/349 (11%), Positives = 82/349 (23%), Gaps = 64/349 (18%)

Query: 1   MIRKYVLALVFFLVPC-----TASVAQKVRL---VSWNINTLSEQEGVSLWKN------- 45
           M + Y  +L    +       + +  +K ++     +N+  L + E  +L  +       
Sbjct: 2   MKKTYFWSLCILFIFVVQTHISVAQQKKYQVYAAAFYNLENLFDTEKDTLINDEEFTAEG 61

Query: 46  ----SVKRTTSDYTLLRQYAKNLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
               + ++       + +    L           V L E+ +   +  +          S
Sbjct: 62  GNRWTAEKYRRKQLNMAKVISRLGKKYCPAGPAFVGLCELENRKVLEDL---TQQPSLVS 118

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
               I H        +  A+       +V           D       R  + +  E+ G
Sbjct: 119 LGYGIVHYDSPDRRGVDVALLYNPSLFKVKDSKV-FAYKVDHLPEYRTRDILLVTGELAG 177

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212
           +++ VL  H  S             S  L    A  ++  +            VI GD N
Sbjct: 178 EEMHVLVNHWPSRYGG--------KSSELREHAASIVRSVVDSLYAQDSLAKVVIMGDLN 229

Query: 213 RKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
                             + +          +  D    +          D  ++ +   
Sbjct: 230 DDPVDKSVRIVLNAKKTQQEVAKGGLFNTMWQHYDRGVGSLGYQGKWNLFDQIIISEPLL 289

Query: 268 KFLIQ-------------------ESFSEILYNEDDIKSRGKRLSDHCP 297
                                     +    +            SDH P
Sbjct: 290 GEDRSTLKFWKSEIYNPEFLITQEGRYKGYPFRTFSGNVFQNGYSDHFP 338


>gi|313498066|gb|ADR59432.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida BIRD-1]
          Length = 264

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 85/292 (29%), Gaps = 50/292 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74
             A   +++R+++ N +                        LR+  ++  ADIVFLQE+ 
Sbjct: 14  SQAPAVKRLRVLTVNTHKGFTAFNRRF----------ILPELREAVRSTQADIVFLQEVL 63

Query: 75  ---GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                + A    +P+ +   F +     +  + +     D H   A+  K   +  ++  
Sbjct: 64  GSHDRHAARYPGWPQTSQYEFLADSMWSDFAYGRNAVYPDGHHGNALLSKYPIIEHRNLD 123

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +            R  +  ++E+ G+          S       +        L      
Sbjct: 124 VSITG-----PERRGLLHCVLEVPGQGQVHAVCVHLSLLESHRQKQLQLLRKLL------ 172

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                      +  P +IAGDFN   ++        + +        F +          
Sbjct: 173 -------DALPANAPVIIAGDFNDWKSHGNRTLGLQRDLHE-----AFERHHGHLARTYP 220

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                + +D   +               + +           LSDH P++++
Sbjct: 221 ARLPLLRLDRIYLRNA-----ESHGPRILGHK------PWSHLSDHLPLAVE 261


>gi|258545109|ref|ZP_05705343.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826]
 gi|258519628|gb|EEV88487.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826]
          Length = 258

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 77/302 (25%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +++++N N +        +               Q+    DAD V +QE  +   + ++
Sbjct: 2   FKIITFNANGIRAAARKGFF---------------QWLNAQDADAVCIQE--TKAQLPQL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               T+  F                  ++ +A+  K+     Q        DS  R    
Sbjct: 45  EGDATYFPFAHNHYHDAE------KKGYSGVALYLKHPPQAVQHGIGWAEIDSEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E       ++ +++ S    +  +                L  W+  +  +  
Sbjct: 96  ------LEARYPGFSLISLYMHSGTSGEERQAKKEA-------FMAKLAPWLNARAAAGE 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
             ++ GD N         +      +                       +          
Sbjct: 143 RLILCGDINIAHTEKDLKNWKGNLKNSGFLPQERAWLTDLFAGEFRDAFRLVHPDAEQYT 202

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++ QN    +   S               +  SDH P+ +
Sbjct: 203 WWSQRGNARANNVGWRIDYHIISQNLAGQVESASV-----------YTDENFSDHAPLIL 251

Query: 301 DY 302
            Y
Sbjct: 252 TY 253


>gi|251792134|ref|YP_003006854.1| metal-dependent hydrolase [Aggregatibacter aphrophilus NJ8700]
 gi|247533521|gb|ACS96767.1| metal-dependent hydrolase [Aggregatibacter aphrophilus NJ8700]
          Length = 263

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 89/298 (29%), Gaps = 54/298 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79
           ++L++ N++  L +                   ++         DIV LQE+    S  A
Sbjct: 1   MKLLTLNVHAWLEDN------------QAEKIDIIADTIVEKGYDIVALQEVNQLMSAPA 48

Query: 80  VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +++   ++ + +               L   +     +     IA   +       ++  
Sbjct: 49  ISQALKQDNYGVVLLNKINQRATQKYSLFWSNSHIGYDKYDEGIAFLTRLPVYEVDAF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      +R+ + L VE  G+ +     H+                      Q   
Sbjct: 108 CSQHQRLDSILSRKILGLTVEYQGQLVDCYSCHINLPNCAGE-------------NQLDN 154

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
           +++ + + +   +  ++ GDFN       N     K++   D+     ++          
Sbjct: 155 IRNIVERSQSRNLK-ILMGDFNTDAISDPNAYQKIKSLGLLDTFEMAEQKDSGITVEKAI 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  K    +  +DY  ++Q       Q  F+               +SDH  + ++  
Sbjct: 214 DGWKGHSEEKRLDYIFLNQAKRVLSSQVVFNGKNKPV---------VSDHFGLEVELT 262


>gi|225557341|gb|EEH05627.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus
           G186AR]
          Length = 330

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 84/303 (27%), Gaps = 28/303 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  +RL+++N+   ++  G    K   +R  +  T +       D   V +QE+ 
Sbjct: 36  PFPNKSLSLRLMTFNVRYAAKPSGN--EKAWSERRGNLITQVAYEMGATDNVFVGMQEVL 93

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130
                  V   N+       +       RD    +  ++ I  RK    +++        
Sbjct: 94  HNQLEDIVNGLNSHPSSGGNDWAYIGVGRDDGKQSGEYSPILYRKSLWELVEMDTKWLSE 153

Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                     A NRR V + V  N +   +  +                         ++
Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRNKRTRAMALVMNTHL---------DHQVSEARLHGSE 204

Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +   I   K            ++ GDFN +             I  +       K    
Sbjct: 205 LILKLIGDYKNKRQYKCKLTGVILTGDFNSEEGQEAYKVVTESKILVDPVKKFGDKNIYG 264

Query: 244 RCNANKNLRN---KIPIDYFVMD-QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298
                    +      IDY  +   N   +  + ++    Y    +    G   SDH  +
Sbjct: 265 NRKTFTGFDSEVGLTRIDYVFVGQGNLCGWGDKGTWDVNRYAVLPNKFDDGIFFSDHRAV 324

Query: 299 SID 301
             D
Sbjct: 325 VAD 327


>gi|150008485|ref|YP_001303228.1| hypothetical protein BDI_1871 [Parabacteroides distasonis ATCC
           8503]
 gi|149936909|gb|ABR43606.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 304

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 91/331 (27%), Gaps = 55/331 (16%)

Query: 2   IRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           +RK    L    + C A  A       V++ S+NI  L+   G               + 
Sbjct: 1   MRKISEILCCVAILCCALSACSDKPATVKVSSFNI-WLNTLGGKLPP-----------SQ 48

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
             +  +    DIV +QE         ++ ++     +  E   +      N      I  
Sbjct: 49  TAKVIEASQTDIVGIQE-------GHIYEEDGIKHDHVPEIAESLGFHLFNQGEGHYILS 101

Query: 117 RKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           R   V      Y   +   KD F    N     +      +   +  I    + F+D+ E
Sbjct: 102 RYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYI----PYQPYQLNGIPYGDYPFIDTEE 157

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223
                +     ++    +  I Q  +   P  + GDFN                      
Sbjct: 158 EAVRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEPSFLDWTQRAADADIHKIKVE 217

Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQE 273
                 +  I  NDS      ++ S                  +D+ +         + +
Sbjct: 218 WPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQDILDRLDFVLYSG----CKVTD 273

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           SF                 SDH  ++  ++F
Sbjct: 274 SFITGESEATSDVVVSPYPSDHRMVTSCFNF 304


>gi|227505913|ref|ZP_03935962.1| exonuclease III [Corynebacterium striatum ATCC 6940]
 gi|227197435|gb|EEI77483.1| exonuclease III [Corynebacterium striatum ATCC 6940]
          Length = 269

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/294 (9%), Positives = 76/294 (25%), Gaps = 47/294 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   +            D D++ LQE    +     
Sbjct: 1   MRIATWNIN----------------SVRTRVQRAVDLLAKHDIDVLCLQETKVADD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +A+  K+      +        +      +
Sbjct: 41  ------KFPVMDFEAAGYHVTHHGLNQWNGVAIVSKSEPEEVFTSFPGQPGFAKDPEKPQ 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-------PSCSLLSQQAQWLKDWIT 196
                 V    + + +  +++ +   +      Y           +    Q++ L     
Sbjct: 95  NLEARAVGARIRGVEIWSLYVPNGREITDRHYAYKLQFLYALARYAESRAQSKLLLTGDF 154

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--- 253
                         F  K +        ++ ++         +  + +     + ++   
Sbjct: 155 NIAPRDEDVWDIEAFRGKTHVTEPERAAFQMLEEAGLEEVTRRFTEEQRWTYFDYKSLRF 214

Query: 254 ----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                + ID+ +  ++          +      D ++  G + SDHC +  DYD
Sbjct: 215 QKNEGMRIDFQLASRSLA-------ATVQSAQVDMVERAGDKTSDHCLLLADYD 261


>gi|50913711|ref|YP_059683.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394]
 gi|50902785|gb|AAT86500.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394]
          Length = 303

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 90/328 (27%), Gaps = 57/328 (17%)

Query: 3   RKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +  +++    +    +   + +++L+SWNI++L+        +  + R       +    
Sbjct: 7   KSLIVSFFVTITTRLSVRKRCQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              DADI+ +QE                  ++     +  S  +     +       KN 
Sbjct: 61  VAQDADIIAIQETKLSAKGPTKKHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                ++P + A  +    G       ++ +  +  +V  ++  +        +      
Sbjct: 121 LNPVITFPEIDAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226
              +     L        ++  P +  GD+N               R   +       + 
Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276
            +        F        +       +            IDY++        + +    
Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMI 286

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +           DH PI +D DF
Sbjct: 287 SSGERQ-----------DHTPILLDIDF 303


>gi|319790980|ref|YP_004152620.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS]
 gi|315593443|gb|ADU34509.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS]
          Length = 267

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 81/311 (26%), Gaps = 77/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +L S N+N L                 +    +  +   L  D + +QE+         
Sbjct: 2   FKLTSLNLNGLRS---------------AATKGVADWVAELAPDCICMQEIR-------- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +     +      +    +   A+  K+         ++G  D+   A  R
Sbjct: 39  VQASDIEGRFEEMAGLKGHFHFAEKKGYAGTAIYTKHAPSQV----IVGWGDAEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +EL  +   +K  V+  +  S    +  +                L        +   
Sbjct: 95  Y-LELRFDTPKRKFSVISCYFPSGSSGEERQLAKFRFLKGFFPHLVAL--------KKER 145

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPN----DSLIRFPKEKDS 243
            FV+ GD N                             K +D        +  +   K  
Sbjct: 146 EFVLCGDINIAHQQIDLKNWRSNQKNSGFLPEERAWMTKLLDAGAEGAGLVDVYRMLKPE 205

Query: 244 RCN-ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
             + A     N+           +DY +           E              +  + S
Sbjct: 206 TTDEAYTWWSNRGQAYANNVGWRLDYHLATPKTAALARTEQI-----------FKTIKFS 254

Query: 294 DHCPISIDYDF 304
           DH PI++DYDF
Sbjct: 255 DHAPITVDYDF 265


>gi|227522924|ref|ZP_03952973.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290]
 gi|227089953|gb|EEI25265.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290]
          Length = 252

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 73/301 (24%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                        +  + LDAD   +QE          
Sbjct: 1   MKFISWNVNGLRAVVKKDF---------------AEIFQKLDADFFCIQETKMQEG-QLK 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                       +  PL  +    +   + 
Sbjct: 45  LDLPGYRQYFNYAERKGYSGTAIF-----------------AKDEPLTVSYGIQAPEFDH 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +++  ++ +        +               L        +S  
Sbjct: 88  EGRAITLEYPN--FYLVTSYVPNSGAKLKRLDFRMGWDKAFHAYLNQL--------DSHK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   +                       +  +     +  F      + +  
Sbjct: 138 PVILCGDLNVAHHEIDLKNPQSNHHNAGFTDEERQSFTKLLDQGFMDTFRHFYPDKEDIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV  +     +        ++            SDHCP+ 
Sbjct: 198 SWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIF-----------GSDHCPVE 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|332358812|gb|EGJ36635.1| exodeoxyribonuclease [Streptococcus sanguinis SK355]
          Length = 275

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  +    G  
Sbjct: 55  KHVEILTKLFPEYENTWRSSQEPARKGYAGTMFLYKKELKPTITFPEIGAPSTMDVEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E +G   +V  ++  +        +      +  ++    L        +   
Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATL--------DEQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|320165253|gb|EFW42152.1| endonuclease/exonuclease/phosphatase [Capsaspora owczarzaki ATCC
           30864]
          Length = 641

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 94/307 (30%), Gaps = 41/307 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMGSYNAVA 81
           +R+  +N+  L ++           +   D     + Q  +++ +DI+  QE+     + 
Sbjct: 3   LRVGQFNLLNLVKENVKFYCGEMYTKEQVDLKVNWIAQQLRHMKSDILGFQEVFHEEVLR 62

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL------QQSYPLLGAKD 135
           +            +            +     +  R   V          +S   + +  
Sbjct: 63  RAIA----QSGIYSADTQLILFGAEGSGPRVGLLSRYPVVDTEEIHEFPPESLIEIDSHI 118

Query: 136 SFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--- 191
              +   R  +  +V +  G  + V  +HLKS   +    + +      +  QA+ L   
Sbjct: 119 IPVKKFYRPVLRCVVRLPTGDLVTVFCLHLKSQRPMVDSAHRHDLKAKAI-GQAKSLVIR 177

Query: 192 --------KDWITQKKESLVPFVIAGDFNRKINYL----------------GNNDDFWKT 227
                      +T+ + +  P ++ GD N  ++ +                   +  W  
Sbjct: 178 AAESAAVRCILVTEMRNNARPVIVCGDLNDVVHSVTTEIVTGTPPFKNMKFEQKEQIWDA 237

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +  + + ++  +       ++ +    + +D+ ++ Q   +               +   
Sbjct: 238 LLWSTNEVQVRQSDRDVTYSHIHNGRYLVLDHILVSQEFVRTNPNRIGYVQFLTILNDHL 297

Query: 288 RGKRLSD 294
             + +SD
Sbjct: 298 IDETMSD 304


>gi|313885686|ref|ZP_07819435.1| exodeoxyribonuclease III [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619051|gb|EFR30491.1| exodeoxyribonuclease III [Eremococcus coleocola ACS-139-V-Col8]
          Length = 275

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       + Q   NL+ DI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSNRALLSRD------VLQTILNLNPDIIAIQETKLSAKGPTQ 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +    ++  S  +     +       K+    + ++P + A       G  
Sbjct: 55  KHLEILADLFKDYMVVWRSSEEPARKGYAGTMFLYKHDLEPKVTFPEIEAPSPMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L            
Sbjct: 114 -----MITLEFDDFYVTQVYTPNAGNALKRLADRQIWDQQYAAYLASLDQ--------DK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GDFN   +                       +  +  +     F         A 
Sbjct: 161 IVLATGDFNVAHHEIDLAHPENNHHSAGFTDEERAGFTQLLAHGFTDTFRHLHGDVTGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++   A   +IQ    +    +           DH PI
Sbjct: 221 TWWAQRVKTSKINNSGWRIDYWLVSNRAVDRVIQSEIIDSGTRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 LLEID 274


>gi|308179822|ref|YP_003923950.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308045313|gb|ADN97856.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 254

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                             LDAD   +QE     A    
Sbjct: 1   MKLISWNVNGLRAAVKHGF---------------VTTFNELDADFFCVQETK-LQAGQIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K+  +       +   D   R    
Sbjct: 45  LDFPGYYQYWN----------YAERKGYSGTAIFTKHEPLNVTYGIGVPEFDDEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +VL  +  +        +               L         +  
Sbjct: 91  -----VITLEYADYYVLTCYTPNSGGELKRLDYRQQWEDAFLTYINSL--------SANK 137

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N     +   +                 +  +        F      + +  
Sbjct: 138 PLIFCGDLNVAHENIDLKNWHSNHHSAGFTDEERTKFDRLLAAGYTDTFRHFYPDQTDIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  Q     L+       ++            SDHCP+ 
Sbjct: 198 SWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARIHNEIF-----------GSDHCPVE 246

Query: 300 IDY 302
           +D 
Sbjct: 247 LDI 249


>gi|302877288|ref|YP_003845852.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2]
 gi|302580077|gb|ADL54088.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2]
          Length = 254

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 78/305 (25%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           +R++S N+N +        +               ++    DAD++ LQE+ +  A    
Sbjct: 1   MRIISVNLNGIRSASSKGFY---------------EWLAQQDADVICLQELKAQAADMTE 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +  ++       +S             +              +G       A 
Sbjct: 46  HMLTPLGYHGYFHYAEKKGYSGVGIYCRELPKNVI--------------VGLGIEQFDAE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +     V+ ++L S    +  +              + L+        S
Sbjct: 92  GRY-----LCADFADYSVVSLYLPSGSSGEERQGVKFSFMEAFLPHLRELRA-------S 139

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N                    L     +   +      +   +       
Sbjct: 140 GREVIVCGDWNIAHKEIDLKNWRGNKKNSGFLPEERAWLTQLFDEVGFVDVFRRVHPELE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A     N+           IDY +            S             + +R SDH P
Sbjct: 200 AYTWWSNRGQAWAKNVGWRIDYQIATPAIAGRATSASI-----------YKEQRFSDHAP 248

Query: 298 ISIDY 302
           + IDY
Sbjct: 249 LIIDY 253


>gi|218961468|ref|YP_001741243.1| Exonuclease III [Candidatus Cloacamonas acidaminovorans]
 gi|167730125|emb|CAO81037.1| Exonuclease III [Candidatus Cloacamonas acidaminovorans]
          Length = 256

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 80/303 (26%), Gaps = 81/303 (26%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFP 85
           SWN+N L                        +  +    DI+ +QE  +  +    ++  
Sbjct: 7   SWNVNGLRAALNKGF---------------IEIIQKEQPDILGIQETKLQEHQIPEELNT 51

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            N + I++S      +S                           LL    S         
Sbjct: 52  LNEYLIYWSHSLRKGYSGTGLFTK--------------------LLPLSFSTGFGNPEFD 91

Query: 146 VELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            E  + I    +    +I+  +    D   N                 + + +K+ S   
Sbjct: 92  NEGRINIAEYTEFIFFNIYFPNGQKDDERLNYKLRFYDRC-------LEVMEEKRTSGKI 144

Query: 205 FVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GDFN   +               +L     +   I     +  F     S      
Sbjct: 145 ILVGGDFNTAHHPIDLANPKENEKTSGFLPIERAWLDKIAEMGWIDTFRYFDKSPE-QYT 203

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DYF +++   + + +    +               SDHCP+ +
Sbjct: 204 WWSYRTKARPRNVGWRLDYFWVNKEGIEHIKKAGIRQ-----------DIEGSDHCPVFV 252

Query: 301 DYD 303
           + +
Sbjct: 253 ELE 255


>gi|322373458|ref|ZP_08047994.1| exodeoxyribonuclease III [Streptococcus sp. C150]
 gi|321278500|gb|EFX55569.1| exodeoxyribonuclease III [Streptococcus sp. C150]
          Length = 275

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSR------KVIDTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++        S  +     +       K       +YP +GA  +    G  
Sbjct: 55  KHLQILEDYFPDYDNTWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        ++  
Sbjct: 114 -----IITLEFDNFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        +         A 
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERTGFTNLLTKGFTDTYRHLNGDVTGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|269127384|ref|YP_003300754.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
 gi|268312342|gb|ACY98716.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
          Length = 466

 Score = 76.9 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 86/292 (29%), Gaps = 35/292 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +    ++++NI  L +    S    ++   +               DIV +QE  +Y+  
Sbjct: 55  SGAFSVLTYNIAGLPDFLSGSHPSRNIPLISPRLA---------PYDIVHVQEDFNYHRA 105

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                 + +            +   S  +  +       + + +      +G  D  +  
Sbjct: 106 LYAGDNHPYRT-----PTSGIAGIGSGLNTLSNFPYDTGDFQRVTWKDCYIGTGDCLTPK 160

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G       +    G  +   ++H  +           S   +  +     L  +I +   
Sbjct: 161 G--FTFMRVRLAEGVYVDFYNLHADAGS--------TSRDIAARNANLDQLTAFIQKH-S 209

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--------NKNLR 252
           S    V+ GD N +    G     +   +    +        +               + 
Sbjct: 210 SGNAVVVMGDTNTRYTRTGERIRQFAAANGLTDVWVSLIRGGTPPPEGGPAPACDTATVD 269

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           N   +D  +   +  KFL   +          +   G+RLSDH PI+ D+ +
Sbjct: 270 NCEVVDKILFRGS--KFLKLNAVRYRNERAAFLDEAGERLSDHDPIAADFTW 319


>gi|326317822|ref|YP_004235494.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374658|gb|ADX46927.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 302

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 73/302 (24%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                   +    L Q+ +     +  LQE+   +     
Sbjct: 1   MKIATFNVN----------------SIRARLPALLQWLQETRPGVACLQELKCTDDA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        R   +            +A+  +    ++    L G           
Sbjct: 42  -------FPAEEIRAAGYGALWHGQKAWNGVAILARGAEPIEVQRGLPGDAADTQSRYLE 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV+ ++        V  ++L +       +  Y  +          L       +    
Sbjct: 95  AAVDGVL--------VACLYLPNGNPAPGPKFDYKLA------WLGRLARRADVLRSRPE 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN                         D ++ +  +                 
Sbjct: 141 PVVLAGDFNIIPTERDVYKPDAWVEDALFRTEVRDAFRALVDSGWTDALRAVHPGETVYT 200

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          ID+ +++  A + L            D       R SDH P   
Sbjct: 201 FWDYLRQRFQRNAGLRIDHLLLNPAAARRLQDAGV-------DRDVRGRARPSDHAPAWA 253

Query: 301 DY 302
             
Sbjct: 254 VL 255


>gi|153951075|ref|YP_001397480.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152938521|gb|ABS43262.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 259

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 82/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  + K    D +  QE+    A    
Sbjct: 8   MKLLSWNVNGLRSICDKNA---------------LDWIKKEKIDFIGFQEI---KAHEDK 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 50  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +           ++ +  +   
Sbjct: 98  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYTDFLV-------YLNKLLKDGF 145

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 146 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFVDTFREINGEIKEKY 205

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 206 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 254

Query: 300 IDYD 303
           I+ D
Sbjct: 255 IEID 258


>gi|16758784|ref|NP_446359.1| deoxyribonuclease gamma precursor [Rattus norvegicus]
 gi|6647472|sp|O89107|DNSL3_RAT RecName: Full=Deoxyribonuclease gamma; Short=DNase gamma; AltName:
           Full=DNaseY; AltName: Full=Deoxyribonuclease I-like 3;
           Short=DNase I-like 3; Flags: Precursor
 gi|3220025|gb|AAC40134.1| DNase gamma [Rattus norvegicus]
 gi|3395772|gb|AAC28937.1| DNAseY [Rattus norvegicus]
 gi|56789880|gb|AAH88122.1| Deoxyribonuclease 1-like 3 [Rattus norvegicus]
 gi|149040086|gb|EDL94170.1| deoxyribonuclease I-like 3 [Rattus norvegicus]
          Length = 310

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 102/308 (33%), Gaps = 40/308 (12%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           Y+ +L+ F++    +++  +RL S+N+ +  E         S K   +   ++ +  K  
Sbjct: 9   YLASLLLFILALHGALS--LRLCSFNVRSFGE---------SKKENHNAMDIIVKIIKRC 57

Query: 65  DADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             D++ L E+   N      + +    N+         + +   R++  + + A   ++K
Sbjct: 58  --DLILLMEIKDSNNNICPMLMEKLNGNSRRSTTYNYVISSRLGRNTYKEQY-AFLYKEK 114

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENT 176
            V V  + Y     +D  +   +R    +  +      K   ++ +H      +  ++  
Sbjct: 115 LVSVKAK-YLYHDYQDGDTDVFSREPFVVWFQAPFTAAKDFVIVPLHTTPETSVKEIDEL 173

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                 +  +                  F+  GDFN   +Y+         +  + + + 
Sbjct: 174 ADVYTDVRRRW-------------KAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPNFVW 220

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SD 294
              +++              I   +  Q     ++  S     + +    S  + L  SD
Sbjct: 221 LIGDQEDTTVKKSTSCAYDRI--VLRGQEIVNSVVPRSSGVFDFQKAYELSEEEALDVSD 278

Query: 295 HCPISIDY 302
           H P+    
Sbjct: 279 HFPVEFKL 286


>gi|313498769|gb|ADR60135.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida BIRD-1]
          Length = 257

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 80/286 (27%), Gaps = 56/286 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79
           + +++ N++                        LR+  +   AD+VFLQE+      +  
Sbjct: 21  LNVLTLNVHKGFTFFNRRF----------ILPELREAVRATGADLVFLQEVHGSHQQHAL 70

Query: 80  VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +P+     F +        + +           A+  K       +  +    +  
Sbjct: 71  RHPAWPETPQYEFLADSMWPQFAYGRNAVYPHGDHGNALLSKFPISRFNNLDVSVQGN-- 128

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  +   +E+ G    V  + +                 +   +Q + + D +  
Sbjct: 129 ---EQRGLLHCQLEVPGHD-QVHAVCVHLGLR-----------EAHRQRQVKLMLDLLAS 173

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P +IAGDFN            W+            +   +   +       + +
Sbjct: 174 -LPPNAPVIIAGDFND-----------WRLKADAVLSEHLTEVFGTPARSFPARLPLLRL 221

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +        +  +   +       K     LSDH P++ + +
Sbjct: 222 DRIYLRNA-----VPGAAQVLS------KYPWSHLSDHVPLAAEIN 256


>gi|300691813|ref|YP_003752808.1| hypothetical protein RPSI07_2169 [Ralstonia solanacearum PSI07]
 gi|299078873|emb|CBJ51534.1| conserved protein of unknown function,
           endonuclease/exonuclease/phosphatase family [Ralstonia
           solanacearum PSI07]
          Length = 289

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 83/304 (27%), Gaps = 50/304 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84
           +++WNI      +G             D   +   A+ +   D++ LQE+ S        
Sbjct: 5   ILTWNIQWGRGVDG-----------RVDLPRMLAEARAMGPFDVLCLQEVTSGFGNLPGQ 53

Query: 85  PKNTWCIFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           P +      +            I   + +         A+  +   +    + L    D+
Sbjct: 54  PGDDQWHELARALGQEFTLIDGIALERHEGARIQRFGNAIATRLPVLHVARHALPCPVDT 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R A+E  V+     + V+  HL+ +     +          ++   +       
Sbjct: 114 SP-TMPRMAIEATVQAPFGPLRVVSTHLEYYSETQRIAQIDVLRALHVAGCMRTAHPPTL 172

Query: 197 QKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             + +  PF         VI GDFN K N                +L    +        
Sbjct: 173 GPEPADGPFRPLAQTHASVICGDFNCKRNSTPKRLATVPFSHETVALYDAWEIAHGPAPQ 232

Query: 248 NKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                              D+ ++ +     + +   +              + SDH P+
Sbjct: 233 PPTFGVHDRTGWTEPAYACDFMLVSEPLKTRVARVEVN-----------SATQASDHQPM 281

Query: 299 SIDY 302
            ++ 
Sbjct: 282 LLEL 285


>gi|260910486|ref|ZP_05917155.1| AP endonuclease domain protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260635432|gb|EEX53453.1| AP endonuclease domain protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 362

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 74/303 (24%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            +++S+N          +L     + T +    +  Y K  DADI+ LQE          
Sbjct: 101 FKVLSYN----------TLMWGGGEATEAQRWEMLNYVKAKDADILCLQEANLGGKFQNT 150

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  I+        +        I+  +A+  K   +  Q      + D        
Sbjct: 151 IDSLLNSIY-------PYHDIKEKTTIYDRLAIYSKYPILRSQRVMYPQSAD-------- 195

Query: 144 RAVELLVEINGKKIWVLDIHL------------------------KSFCFLDSLENTYSP 179
            +    V      + V++ H                         +      SL +    
Sbjct: 196 FSQACWVATPDDTVLVINNHFATTGLTEAQRQNFKNMLKGDLRTKQMPGLGKSLIHKLGE 255

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              + + Q   +  ++ +        ++ GDFN        +          +    +  
Sbjct: 256 YAQVRAPQVDAVARFVRKH--KGHSVILCGDFNDSPISYARHRM------AKELTDCYVA 307

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             +    +       + ID  +   +                           SDH PI 
Sbjct: 308 SGNGPGISYHRNAFYVRIDNIMCSDDWQPLKCVVENKVKT-------------SDHYPIF 354

Query: 300 IDY 302
              
Sbjct: 355 CQL 357


>gi|228995734|ref|ZP_04155396.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
 gi|228764016|gb|EEM12901.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
          Length = 263

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF-----------YSTERLIN 100
                L +  +    D++ LQE+        V        F            S    I 
Sbjct: 18  EKIRHLAKTIQEEGYDVIALQEVSQSIKAQNVCGNKKKDNFGLVLLAELEKLGSGNYNIV 77

Query: 101 HSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   DI+    A+  K+  V Q S+ +  +KD+      R+ V   V   GK +  
Sbjct: 78  WDYSHIGYDIYEEGSAIITKHPIVKQDSFFVSESKDTSYWKA-RKIVSATVSYKGKNMTF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L   +          ++ GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEETFQGQVDCLTQHVN----EKELSILMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              D+       D+     K+ +      K            ID  + ++       +  
Sbjct: 183 EGYDYLMQKGLYDTYELAFKKDEGTTVQGKIAGWDENKQNLRIDLILSNKPKTVISSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+ I  N          +SDH  + +  D
Sbjct: 243 FNGINRNI---------ISDHFGVEVQLD 262


>gi|289829520|ref|ZP_06547122.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-3139]
          Length = 228

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/233 (10%), Positives = 58/233 (24%), Gaps = 47/233 (20%)

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
            ++        H  +A+  K   +  +                RR +   +      I V
Sbjct: 11  GYNVFYHGQKGHYGVALLTKATPISVRR-----GFPDDGEEAQRRIIMAEIPSPLGNITV 65

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-- 217
           ++       F       +       +Q  Q L++++  + +   P +I GD N       
Sbjct: 66  IN-----GYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLD 120

Query: 218 -------------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--- 255
                              L    ++   +     +  F +      +       +    
Sbjct: 121 IGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGF 180

Query: 256 ------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  ID  +      +   +          D      ++ SDH P+   +
Sbjct: 181 VDNRGLRIDLLLASAPLAERCAETGI-------DYDIRSMEKPSDHAPVWATF 226


>gi|83593698|ref|YP_427450.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
           11170]
 gi|83576612|gb|ABC23163.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
           11170]
          Length = 255

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/276 (11%), Positives = 77/276 (27%), Gaps = 55/276 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + ++NI++    +G                 + Q  + LDAD++ LQE+    A+     
Sbjct: 19  IATYNIHSCLGTDGAFRPD-----------RVAQAIRALDADVIGLQEV--GWALRGPSG 65

Query: 86  KNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            + +      T   +       + + H   A+  ++         L     S      R 
Sbjct: 66  FDQFAFLERETGYTVIPGLVRHHANAHFGNAILSRHPVESVAPLDLSLPYHS-----PRG 120

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            ++  + + G+ + ++++HL                  +     + L  W         P
Sbjct: 121 GIDARIRVKGRSVRLINVHL--------GLIPLERRIQIRRIGLRLLDGW-------RGP 165

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GD N             + +                     +    +  D  +   
Sbjct: 166 ALVCGDLNHWRRTSPAMQRLHRLL-----------PGGVTGQTYPSALPTMMFDRILATG 214

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +            +  ++       +  SDH P+  
Sbjct: 215 DL----------HLENHQVIRTEGTRVASDHLPLMA 240


>gi|304314422|ref|YP_003849569.1| DNA lyase [Methanothermobacter marburgensis str. Marburg]
 gi|302587881|gb|ADL58256.1| predicted DNA lyase [Methanothermobacter marburgensis str. Marburg]
          Length = 257

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 85/306 (27%), Gaps = 77/306 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
           +++++SWN+N L                         +  +   DI+ LQE         
Sbjct: 3   EIKIISWNVNGLRAVYRKGF---------------LDWFMDEKPDILCLQETKASPEQLP 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++     +  F++      +          + +A+  +      +    +   D   R 
Sbjct: 48  RRLRHVEGYRSFFTPAERKGY----------SGVAMYTRIPPKSIREGFGVERFDIEGRI 97

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                       +     + +I+  +    D              +      + + ++++
Sbjct: 98  QV---------ADFDDFLLYNIYFPNGKMSDER-------LKYKLEFYDAFLEDVNRERD 141

Query: 201 SLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244
           +    VI GDFN     +                       K I+            +S 
Sbjct: 142 AGRNTVICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNNESG 201

Query: 245 CNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                + R +         +DYF +++   K + +      +             SDHCP
Sbjct: 202 QYTWWSYRTRARERNVGWRLDYFFVNEEFAKNVKRSWILSEV-----------MGSDHCP 250

Query: 298 ISIDYD 303
           + ++ +
Sbjct: 251 VGLEIE 256


>gi|294777627|ref|ZP_06743078.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|319640218|ref|ZP_07994944.1| hypothetical protein HMPREF9011_00541 [Bacteroides sp. 3_1_40A]
 gi|294448695|gb|EFG17244.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|317388205|gb|EFV69058.1| hypothetical protein HMPREF9011_00541 [Bacteroides sp. 3_1_40A]
          Length = 359

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/336 (12%), Positives = 88/336 (26%), Gaps = 85/336 (25%)

Query: 3   RKYVLALVFFLVPCTASV---------------AQKVRLVSWNINTLSEQEGVSLWKNSV 47
           RKY L L F  + C+                     ++ +S+N     +    +    + 
Sbjct: 66  RKYAL-LSFLGLVCSIGAIRTYFPVNVFVSDVPEGAIKFLSYNTMAFEKNRANTKDNPNP 124

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                    + +Y +N +ADI+ LQE         +                   K    
Sbjct: 125 ---------VLEYLRNSNADIICLQE--------YIVGGRLTKKEVDYALRDYPYKNYHK 167

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 +    +   +           +         ++   +++NG  + V++ HL+S 
Sbjct: 168 ISGANGLGCYSRFPILSAHPVKYASLNN--------GSIAYKIKVNGDTLLVVNNHLESN 219

Query: 168 CFLDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVP 204
              +  +  Y                         + ++ + QA  +   +   K     
Sbjct: 220 KLTEKDKEVYREMMKDPDKQKVSQGSRLLIRKLAEASAIRAVQADSIARLVAGYKGGG-- 277

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GDFN        +    + ++                N          ID  ++ +
Sbjct: 278 IIVCGDFNDSPISYT-HRVVGEGLNDAFVESGNGFGISYNQNHFYF-----RIDNILLSK 331

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           N   +                     + SDH PI  
Sbjct: 332 NLKSYRCTV-------------DNTIKSSDHYPIWC 354


>gi|188590962|ref|YP_001795562.1| exodeoxyribonuclease iii/endonuclease/phosphatase [Cupriavidus
           taiwanensis LMG 19424]
 gi|170937856|emb|CAP62840.1| putative EXODEOXYRIBONUCLEASE III/endonuclease/phosphatase
           [Cupriavidus taiwanensis LMG 19424]
          Length = 258

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 82/307 (26%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           +R++S N+N +        +                +    DAD+V +QE+ +  A    
Sbjct: 2   LRIISANLNGIRSASKKGFF---------------DWMGKQDADMVCVQELKAQAADMTE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + +  F+       +S                       +  P        +   
Sbjct: 47  AFLAPHGYHGFFHYAEKKGYSGVGLYT-----------------RHKPERVITGFGNAEF 89

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +     + V+     + V+ +++ S    +  +                LK        S
Sbjct: 90  DNEGRYVEVQYP--HLAVISVYVPSGSSGEERQLAKFRFLEAFLPHLLQLKA-------S 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246
               V+ GD N     +   +                    +      +   ++ D R +
Sbjct: 141 GREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWIGELFDVHGYVDVFRKLDPRPD 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             + ++ SDH P
Sbjct: 201 QYTWWSNRGQAYAKNVGWRIDYHLATPKIADTAQLCSI-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           +SIDY+F
Sbjct: 250 LSIDYNF 256


>gi|294629849|ref|ZP_06708409.1| exodeoxyribonuclease III [Streptomyces sp. e14]
 gi|292833182|gb|EFF91531.1| exodeoxyribonuclease III [Streptomyces sp. e14]
          Length = 267

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 78/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + S N+N L                        ++     AD++ LQE+         
Sbjct: 2   LTVTSVNVNGLRAAAKKGF---------------VEWLARTGADVLCLQEVRAEPQQLPE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     W + ++           +       +++  +      +        D   R  
Sbjct: 47  QVRAPEGWHVTHAP----------AAAKGRAGVSLYTRREPDRVRVGFGSTEFDGSGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 +  ++ G  + V  ++L S       ++             + L++        
Sbjct: 95  -----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLAYLKELRERA---AAD 144

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTI--DPNDSLIRFPKEKDS 243
               ++ GD+N                         +   + +  +    +         
Sbjct: 145 GREVLVCGDWNIAHQRADLKNWRGNLKNSGFLPEEREWLTQVLTPEAGGYVDVVRALHPD 204

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           IDY V         ++          +   +  +R SD
Sbjct: 205 VEGPYSWWSYRGRAFDNDTGWRIDYHVSTPGLAAKAVKGFV-------ERAATHAERWSD 257

Query: 295 HCPISIDYD 303
           H P+++ YD
Sbjct: 258 HAPVTVVYD 266


>gi|291568366|dbj|BAI90638.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 497

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 88/304 (28%), Gaps = 31/304 (10%)

Query: 22  QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             V++ ++N+  L           + + +      T + +  + + ADI+  QE+    A
Sbjct: 170 NSVKIGTFNLYNLVLPNLTYYETRQYTPELYQQKKTWVSRQLETMQADIIGFQEIFHPEA 229

Query: 80  VAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           + ++      +   +         K          I   +   +   +S   +       
Sbjct: 230 LQEILAATPFYDHAHLITTNPRGDKPVVGLCSKLPIISWQIYDKFPPESQIDIEGTIIPI 289

Query: 139 RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS----------PSCSLLSQQ 187
              +R  + + +++    +  V  +HLKS                       S    + +
Sbjct: 290 NHFSRPVLAVNIQLQDHLQCTVFVVHLKSQRPKIPEGVDSQDPVEKAKGKVRSLLRRAAE 349

Query: 188 AQWLKD-WITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPNDSLIRF 237
           A  L+   +     S  P ++ GDFN              +      +K     D L  +
Sbjct: 350 ATALRYIMLKTWSHSQNPIILLGDFNDSDLAITTKIMAGDISWKKTRFKPNHNQDELRLY 409

Query: 238 PKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             +      + ++             +D+ ++ Q       ++          +     +
Sbjct: 410 SVKDIQVRQSYRDCYYTYMYNGYYETLDHILVSQELVVENSRQVGRVSYVALFNDHLVDQ 469

Query: 291 RLSD 294
            LSD
Sbjct: 470 SLSD 473


>gi|254511339|ref|ZP_05123406.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11]
 gi|221535050|gb|EEE38038.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11]
          Length = 262

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/308 (9%), Positives = 72/308 (23%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
              L +WNIN                       ++ +  +    D++ LQE  S      
Sbjct: 2   PFTLATWNIN----------------SVRLREPIVLKLLQEEAPDVLCLQECKSPVEKIP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F +  +                     +  +A+  +            G   +    
Sbjct: 46  TEGFAELGYTHMI-----------ARGQKGYNGVAILSRLPMEEVGDKDFAGLGHARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +   +E     + + + ++ +    D  +   +            ++DW   +K 
Sbjct: 93  -----IAGRLENG---VTIHNFYVPAG--GDVPDREVNEKFGQKLDYLTDMRDWFHAEKP 142

Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRC 245
                ++ GD N         ++    K +                   +   ++     
Sbjct: 143 GKS--ILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVEHLAETQDAGGWVDITRQDIPEG 200

Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +                        ++ SDH
Sbjct: 201 QLYSWWSYRARDWDAADKGRRLDHVWATSDISNAGHSS-------RILRDARGWEKPSDH 253

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 254 APVFATFD 261


>gi|193215004|ref|YP_001996203.1| exodeoxyribonuclease III Xth [Chloroherpeton thalassium ATCC 35110]
 gi|193088481|gb|ACF13756.1| exodeoxyribonuclease III Xth [Chloroherpeton thalassium ATCC 35110]
          Length = 281

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 72/305 (23%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + +WNIN                   +    L  +  +   DI+FLQE+      A +
Sbjct: 24  FTVSTWNING----------------IRARKDSLVDWLASNKPDILFLQEIK-----ADI 62

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +          T I V+K     L      +   D+ +R    
Sbjct: 63  AKIPPVFSELPDYDAFWNDSTFKGGYSGTGILVKKSLKESLGNPIFSIPEFDAENRI--- 119

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE   K+  ++ I+       D           L  Q  + L        ++  
Sbjct: 120 ------VEAAFKQTVLIGIYTPRGEKDDHY--------ELKLQMLEQLTLRAQGLMQNGA 165

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN        +                     +     +              
Sbjct: 166 DVLICGDFNVAHTEKDVHSSQNKPNATGLRPKERAAIDRLLSAGLIDITRALYPDNSELF 225

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID F +         +                 ++ SDH P++
Sbjct: 226 TWWPYWKGAREKNLGWRIDCFYVSPQLATRTRKVEV-----------DTEEKSSDHSPVT 274

Query: 300 IDYDF 304
           +  DF
Sbjct: 275 LVLDF 279


>gi|120586985|ref|NP_001073361.1| hypothetical protein LOC317628 [Rattus norvegicus]
 gi|119850781|gb|AAI27531.1| Similar to apurinic/apyrimidinic endonuclease 2 [Rattus norvegicus]
 gi|149031345|gb|EDL86343.1| rCG38932, isoform CRA_a [Rattus norvegicus]
          Length = 516

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 80/331 (24%), Gaps = 72/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 2   LRVVSWNINGIRSPLQGLAGQEPSNS----PTALRRVLDELDADIVCLQETKVTRDVLTE 57

Query: 81  -AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136
              +         +S  R           D  T +A           L       G  D 
Sbjct: 58  PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNTDE 117

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                 +E   K + +++++                    LL
Sbjct: 118 FTQEELRVLDSEGRAFLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 178 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSN 230

Query: 231 NDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQ 272
             +                +                        +DY + D++       
Sbjct: 231 PGNEAGPHIGHFMDSFRYFHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRSL------ 284

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +          SDHCP+    +
Sbjct: 285 ----VIDTFQASFLLPEVMGSDHCPVGAVLN 311


>gi|34500277|gb|AAQ73759.1| deoxyribonuclease I-like 2 short form [Homo sapiens]
 gi|34500279|gb|AAQ73760.1| deoxyribonuclease I-like 2 short form [Homo sapiens]
 gi|119605934|gb|EAW85528.1| deoxyribonuclease I-like 2, isoform CRA_b [Homo sapiens]
          Length = 278

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 80/284 (28%), Gaps = 32/284 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI +  + +       S+         + +       D+  +QE+   +  A  
Sbjct: 22  LRIGAFNIQSFGDSKVSDPACGSI---------IAKILAGY--DLALVQEVRDPDLSAVS 70

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       E     S+    +          +   V      L    +      +R
Sbjct: 71  ALMEQINSVSEHEYSFVSSQPLGRDQYKEMYLFVYRKDAVSVVDTYLYPDPE---DVFSR 127

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +     G    ++ I L +     +     +   +L       +  W         
Sbjct: 128 EPFVVKFSAPGTAQNLVLIPLHA-----APHQAVAEIDALYDVYLDVIDKW------GTD 176

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM- 262
             +  GDFN   +Y+   D     +  ++       +       N +       D  V  
Sbjct: 177 DMLFLGDFNADCSYVRAQDWAAIRLRSSEVFKWLIPDSADTTVGNSDCAY----DRIVAC 232

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304
                + L  +S +   + E+    + + L  SDH P+ +   F
Sbjct: 233 GARLRRSLKPQSATVHDFQEEFGLDQTQALAISDHFPVEVTLKF 276


>gi|302334904|ref|YP_003800111.1| exodeoxyribonuclease III Xth [Olsenella uli DSM 7084]
 gi|301318744|gb|ADK67231.1| exodeoxyribonuclease III Xth [Olsenella uli DSM 7084]
          Length = 263

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 80/310 (25%), Gaps = 76/310 (24%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T +  + ++LVSWN+N L                        Q    LDAD+  +QE   
Sbjct: 4   TVAPDRALKLVSWNVNGLRA-------------VMRKDPSFLQIFSQLDADVFAIQETK- 49

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              + +   +     ++ T          +    ++  AV  +   +           D 
Sbjct: 50  ---LQEGQVELDLPGYFQTWN-------FAERKGYSGTAVFSREDPLRVIRQIGSDVADD 99

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R         +  +     W +D++  +     +                  L     
Sbjct: 100 EGR---------VCALEFPTFWFVDVYTPNSKQGLARIEERMGWDERFRLFLLEL----- 145

Query: 197 QKKESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEK 241
              ++  P V  GDFN                   +     D +  +        F    
Sbjct: 146 ---DAHKPIVTCGDFNVAHQEIDLRNPSTNHENPGFSDAERDSFGRLLDAGFTDTFRSLN 202

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                A      +           IDYF+  +     +   S  + ++            
Sbjct: 203 PDLEGAYSWWSYRMRARERNVGWRIDYFLTSERVADRIEGASIHDEVF-----------G 251

Query: 293 SDHCPISIDY 302
           SDHCPI +  
Sbjct: 252 SDHCPIELQI 261


>gi|227874670|ref|ZP_03992832.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269976389|ref|ZP_06183379.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1]
 gi|227844743|gb|EEJ54890.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269935410|gb|EEZ91954.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1]
          Length = 294

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 74/283 (26%), Gaps = 48/283 (16%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            + +N D+D++ LQE+ +     +      W +     R+   +         +      
Sbjct: 21  DWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRVKGRAGVALGARRDSD----W 76

Query: 119 KNVRVLQQSYPLLGAK--DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +  ++ +   P L A+          R     + E  G    ++  +L S       +  
Sbjct: 77  EIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHEPQGTTFTLVSAYLHSGELRTEKQEQ 136

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNND------------ 222
                  + ++ Q L         S  P   +I GDFN         +            
Sbjct: 137 KIAFLHRVGERVQQLSARAMAGAGSDTPQEALICGDFNIVRTARDIKNWKPNHNKTSGVM 196

Query: 223 ---------DFWKTIDPNDSLIRFPKE---KDSRCNANKNLRNK---------IPIDYFV 261
                        T+  +  L                      +           +DY +
Sbjct: 197 DEEIAFLDAWMADTLSGSKRLPCVDVGRALAGDTDGPYTWWSWRGKAYDNNAGWRLDYHM 256

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       +            +   R +DH P+++ YDF
Sbjct: 257 ATPGLAGQAQSAAV-------YRAPAYDARFTDHAPVTVAYDF 292


>gi|154274602|ref|XP_001538152.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414592|gb|EDN09954.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 330

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 85/303 (28%), Gaps = 28/303 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  +RL+++N+   ++  G    K   +R  +  T +       D   V +QE+ 
Sbjct: 36  PFPNKSLSLRLMTFNVRYAAKPSGN--EKAWSERRGNLITQVAYEMGATDNVFVGMQEVL 93

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130
                  V   N        +       RD    +  ++ I  RK    +++        
Sbjct: 94  HNQLEDIVKGLNNHPSSGGDDWAYIGVGRDDGKQSGEYSPILYRKSLWELVEMDTKWLSE 153

Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                     A NRR V + V  N +   +  +                         ++
Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRNKRTRAMALVMNTHL---------DHQVSEARLHGSE 204

Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +   I   K            ++ GDFN +             +  +       K    
Sbjct: 205 LILKLIGDYKNKRQYKCKLTGVILTGDFNSEEGQEAYKVITESKVLVDPVKKFGDKNIYG 264

Query: 244 RCNANKNLRN---KIPIDYFVMD-QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298
                    +      IDY  +   N  ++  + +++   Y    +    G   SDH  +
Sbjct: 265 NRKTFTGFDSEVGLTRIDYVFVGQGNLCRWGDKGTWNVNRYAVLPNKFDDGIFFSDHRAV 324

Query: 299 SID 301
             D
Sbjct: 325 VAD 327


>gi|33591597|ref|NP_879241.1| putative endonuclease [Bordetella pertussis Tohama I]
 gi|33571240|emb|CAE44701.1| putative endonuclease [Bordetella pertussis Tohama I]
 gi|332380997|gb|AEE65844.1| putative endonuclease [Bordetella pertussis CS]
          Length = 262

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 92/306 (30%), Gaps = 74/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ S N+N +                 +    L+ +    +AD++ LQE  +   +   
Sbjct: 2   LRITSLNLNGIRS---------------AFRKGLQPWMTAHNADVLCLQEIKVSHDDLTD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +   +       +S           + +R    RV+       G       A 
Sbjct: 47  ELRHPPGYTGHFHHAEKKGYSG--------VGMYLRAGAERVVA------GFDCEEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  + K + V+  +L S    D  + T              L   + + +++
Sbjct: 93  GRI-----LRADWKDLSVISAYLPSGSSGDERQQTKYRFLDQFGPWLDGL---MAEHRKT 144

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              FVI GD+N                    L     +   +      +   ++ D R +
Sbjct: 145 GREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEERAWLTEVFDRRGFVDVFRKLDERAD 204

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +      +     S             + +R SDH P
Sbjct: 205 QYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARATSI-----------YKDERFSDHAP 253

Query: 298 ISIDYD 303
           +++DYD
Sbjct: 254 LTVDYD 259


>gi|254445623|ref|ZP_05059099.1| exodeoxyribonuclease III [Verrucomicrobiae bacterium DG1235]
 gi|198259931|gb|EDY84239.1| exodeoxyribonuclease III [Verrucomicrobiae bacterium DG1235]
          Length = 251

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N +                         +    DAD + LQE  +   + K 
Sbjct: 1   MKFVSWNVNGIRAIMKKGAM---------------DFFDGCDADFICLQETKATADIVKD 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F         + E              ++  A+  +           +   D   R    
Sbjct: 46  FDWGVSKTVLANEAEK---------KGYSGTAIIARTEPESVSYGIGIEKHDGEGR---- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V     + +++ ++  +                      + L+           
Sbjct: 93  -----VVTAEYPEFFIVTVYTPNAQNELRRLPYRQEWDRDFLAYVKALEA--------TK 139

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  I     +  F +    + +  
Sbjct: 140 PVIFCGDLNVAHTEDDLANPKTNRKNAGFTDEERAGFDDIVAAGFVDTFREFTQGKGH-Y 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++ ++    L   S    +             SDHCP+ 
Sbjct: 199 SWWSYRGGARSRNVGWRIDYFMISESLRPQLKSASILPEVL-----------GSDHCPVE 247

Query: 300 IDY 302
           + +
Sbjct: 248 MVF 250


>gi|197120879|ref|YP_002132830.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. K]
 gi|196170728|gb|ACG71701.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. K]
          Length = 265

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 77/303 (25%), Gaps = 80/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    + ++      D+V LQE+ +  +    
Sbjct: 1   MKIGTWNVNG----------------IRAREAQVGEFIAREAPDVVCLQEIKAPPS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  S   L  +         ++ +A+  +     ++   +    D  +R    
Sbjct: 41  ------KVPPSLCELEGYWCLWHGETAYSGVALLVRKAIAPERPAFVHPPFDLETR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  E+ G  + V  I++ +               +   +  + ++ +    + S  
Sbjct: 91  ---IATCELGG--VTVASIYVPNGG----------KDLAAKLRFLEAMERFAADAQASGR 135

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N     L                     ++ I     +        +     
Sbjct: 136 RLVLCGDLNVARTDLDVHPKERKAGAIGQLPEERALFERILSRGLVDVGRALDPANEGLF 195

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDY              S S                SDH P+ 
Sbjct: 196 TWWAPWRNLRQRNIGWRIDYV-----------LASASLAASATRCRVLADFGTSDHAPVV 244

Query: 300 IDY 302
            ++
Sbjct: 245 AEF 247


>gi|300767631|ref|ZP_07077541.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300494616|gb|EFK29774.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 265

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+L+SWN+N L                             LDAD   +QE     A    
Sbjct: 12  VKLISWNVNGLRAAVKHGF---------------VMTFNELDADFFCVQETK-LQAGQIE 55

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K+  +       +   D   R    
Sbjct: 56  LDFPGYYQYWN----------YAERKGYSGTAIFTKHEPLNVTYGIGVPEFDDEGR---- 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +VL  +  +        +               L         +  
Sbjct: 102 -----VITLEYADYYVLTCYTPNSGGELKRLDYRQQWEDAFLTYINSL--------SANK 148

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N     +   +                 +  +        F      + +  
Sbjct: 149 PLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERTKFDRLLAAGYTDTFRHFYPDQTDIY 208

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  Q     L+       ++            SDHCP+ 
Sbjct: 209 SWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARIHNEIF-----------GSDHCPVE 257

Query: 300 IDY 302
           +D 
Sbjct: 258 LDI 260


>gi|300726843|ref|ZP_07060273.1| exodeoxyribonuclease III [Prevotella bryantii B14]
 gi|299775956|gb|EFI72536.1| exodeoxyribonuclease III [Prevotella bryantii B14]
          Length = 250

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 81/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +  K+ DAD   +QE          
Sbjct: 1   MKLISWNVNGLRACVTKGFK---------------ETFKSFDADFFCIQETKMQEG-QLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  F++      +S                                         
Sbjct: 45  LQFDGYESFWNYADKKGYSGTAIYAKT-----------------------------KPLN 75

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQKKES 201
               + ++ +  +  V+ +   +F  +             L+ +  W KD+     K + 
Sbjct: 76  VTYGIDIDDHNHEGRVITLEYDNFFLVTVYTPNSQNELKRLNYRMIWEKDFQTYLHKLDK 135

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             P ++ GD N                         +   + +    +     K  +   
Sbjct: 136 RKPIIVCGDMNVAHQEIDIKNPKTNHKSAGFTDEEREKMTQLLSNGFTDTFRFKYPEQIT 195

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +  + R +         IDYF++     + ++                     SDHCP+
Sbjct: 196 YSWWSYRFRAREKNAGWRIDYFLVSDRIKEKVLDAKIHT-----------DIMGSDHCPV 244

Query: 299 SIDYD 303
            +  +
Sbjct: 245 ELTIE 249


>gi|188991692|ref|YP_001903702.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167733452|emb|CAP51653.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris]
          Length = 367

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 70/302 (23%), Gaps = 70/302 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
            + ++N+N ++                     L Q+ +    DIV LQE+ S        
Sbjct: 18  TIATYNVNGIAS----------------RLPHLLQWLQREQPDIVGLQELKSTQEA---- 57

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                       R   +            +A+  +    ++    L              
Sbjct: 58  ------FPEQAIRDAGYGVIWQGQRSWNGVALLARGAEPVEIRRGLPWDPADTQSRYLEA 111

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           A+  ++        V  ++L +       +  Y        +  Q L            P
Sbjct: 112 AIHGVI--------VGCLYLPNGNPQPGPKFDYK------LKWFQRLLRHAATLVALPHP 157

Query: 205 FVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             + GDFN                       +   +  +                     
Sbjct: 158 VALIGDFNVVPTDAHIYDPKGWRKDALLQPESRAAYAQLLAQGWTDSLQAIHGDAPVYTF 217

Query: 250 NLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +          ID+ ++++     L            D      ++ SDH P  I 
Sbjct: 218 WDYFRQHFARDRGLRIDHLLLNRTLAAGLRDAGV-------DKWVRALEKASDHAPTWIT 270

Query: 302 YD 303
            D
Sbjct: 271 VD 272


>gi|293339926|ref|XP_002724704.1| PREDICTED: rCG35247-like isoform 3 [Rattus norvegicus]
 gi|293351345|ref|XP_002727798.1| PREDICTED: rCG35247-like isoform 3 [Rattus norvegicus]
          Length = 363

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 91/300 (30%), Gaps = 38/300 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A  +R+ ++N+ +  + +       SV         + Q       DI  +QE+   +  
Sbjct: 81  ATALRIGAFNVQSFGDHKASDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 129

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           AV+ +  +      +    + +                RK  V V   +Y     +D   
Sbjct: 130 AVSLLMEQINSVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVVSV-VSTYQYPDPED--- 185

Query: 139 RAGNRRAVELLVEING-----------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            A +R    +     G            ++ +      S    + +      + +    +
Sbjct: 186 -AFSREPFVVKFSAPGCGELIPPPPPSYRLSLTLTSPLSTAAKELVLIPLHAAPNQAVAE 244

Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              L D      +  +    +  GDFN    Y+  +D     +  +        +     
Sbjct: 245 IDALYDVYLDVIDKWNTDDMLFLGDFNADCKYVKAHDWPSIRLRSSQVFKWLIPDSADTT 304

Query: 246 NANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             N +       D  V+      K +  +S S   + E+    + + L  SDH P+ + +
Sbjct: 305 VGNSDCAY----DRIVVSGAHMRKSVKPQSASVHNFQEEFDLDQTQALAISDHFPVEVTF 360


>gi|254447779|ref|ZP_05061244.1| endonuclease/exonuclease/phosphatase family protein [gamma
           proteobacterium HTCC5015]
 gi|198262559|gb|EDY86839.1| endonuclease/exonuclease/phosphatase family protein [gamma
           proteobacterium HTCC5015]
          Length = 246

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 93/288 (32%), Gaps = 51/288 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+++N++         L              +R+  +  +ADIV LQE+   +   + 
Sbjct: 1   MKLITYNMHKGFGVGNRRLV----------LHDMREALRAANADIVCLQELQGEHHHHRN 50

Query: 84  ----FPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +P+     F +        + K       H   A+  +      ++  +   +++ 
Sbjct: 51  NHRHWPEEEQLEFLADSLWPHTAYGKNAVYQHGHHGNAILSRQPFSDWENINVSHRENA- 109

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               +R  +  ++E N G+++ ++ +HL  F      +                L D I 
Sbjct: 110 ----SRSLLHGVIESNDGQRLHIICVHLGLFERERRRQIRQ-------------LSDRIE 152

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                    +IAGDFN             +     + +      K +          K  
Sbjct: 153 SHVPHHEALLIAGDFNDWRQRCDRY---LRQHSEVEEVFEAHLGKVAPSFPAWYPLLK-- 207

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +D                   +   +       + LSDH P+S+++D+
Sbjct: 208 VDRVYARG-----------VSVNAVKRLTGQPWRGLSDHIPLSVEFDW 244


>gi|187779536|ref|ZP_02996009.1| hypothetical protein CLOSPO_03132 [Clostridium sporogenes ATCC
           15579]
 gi|187773161|gb|EDU36963.1| hypothetical protein CLOSPO_03132 [Clostridium sporogenes ATCC
           15579]
          Length = 352

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 99/321 (30%), Gaps = 64/321 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               + ++NI               G     +S ++T  +   +  + K   +  +FLQE
Sbjct: 53  DSFSIATFNIGYAGMDDEQDFFMDGGKGSRSSSKEKTMENMKEITAFLKKDHSSFIFLQE 112

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---------- 123
           + + +   + F  N +    +  +  + S   +       + V K +  V          
Sbjct: 113 VDTNS--TRSFRINQYDYLKNNLKAYSSSMALNYKTPWVPVPVLKPHGTVNAGLVNLSKY 170

Query: 124 -----LQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177
                 +  YP            +R  +E  + + N K++ +++ HL ++          
Sbjct: 171 KVNSATRYQYPGKEGWPRQLAELDRCFLESRISLENDKELVLINSHLSAYDKGG------ 224

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTI 228
                +  QQ  +L+++I ++ +     ++ GD+N  I               D   K  
Sbjct: 225 ----KIRKQQLSFLRNYIIKEYKKGNYIIVGGDWNHLIPGTDPLIFKTTEKWPDWLQKIP 280

Query: 229 DPNDS--LIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYN 281
           +            +       +             ID F++  N    +I      + + 
Sbjct: 281 NDFKPKEFKWVADKNVPTTRTDATPYKKGENFTAVIDGFLVSDNI--EVISVKAHSMDFK 338

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                       DH P+++ +
Sbjct: 339 NT----------DHNPVNMKF 349


>gi|315505929|ref|YP_004084816.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|315412548|gb|ADU10665.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 259

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 82/308 (26%), Gaps = 79/308 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +RL ++N+          +  +           L     +LDAD++ LQE+         
Sbjct: 1   MRLATFNLLHGRSLTDGLVDPD----------RLTAAVTDLDADVLALQEVDRDQTRSGK 50

Query: 79  -----AVAKVFPKNTWCIFYSTERLINHSKR------DSNNDIHTAIAVRKKNVRVLQQS 127
                  A+    +      +         R      D + +    I +  ++     Q 
Sbjct: 51  LDLTAVAARALHADHHRFAAAVVGTPGEQFRPLTHDDDGHGEPLYGIGLISRHPVRSWQV 110

Query: 128 Y-------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
                         P  G      R   R  +  +++     + V   HL      +   
Sbjct: 111 TRLRAAPVRSPIYAPGPGGGLVLLRDEPRVVLAAVLDTPHGPLTVAATHLSFVPGWN--- 167

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                           L+  +   +    P ++ GD N               +    + 
Sbjct: 168 -------------IWQLRRVVRVLRTLPAPRILLGDLN---------------LPAGPAA 199

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                +  +R       + ++ +D+ + D++    L   +                 +SD
Sbjct: 200 ALTRWQPLARRPTYPAGQPRVQLDHILADRHGLDRLPAVTAVHTPLAT---------ISD 250

Query: 295 HCPISIDY 302
           H P+ +D 
Sbjct: 251 HRPLVVDL 258


>gi|239947787|ref|ZP_04699540.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922063|gb|EER22087.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 279

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 81/307 (26%), Gaps = 72/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+ A     DI+ LQE    +++   
Sbjct: 16  MKIVTWNINSL----------------HLRIDLLRKLAHEHQPDIILLQETKVADSL--- 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       +    +  +A+  K       S  L  +         R
Sbjct: 57  ------FPLEVIKNIGYEHVIYAGQKSYNGVAIISKFPLNNAFSLELYNSDK-------R 103

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +I     +V           D  +   +       +  + +++W+T  +    
Sbjct: 104 HIAAIVNDIEIHNFYV-------PAGGDVPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 156

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N   +                         +  +    +             
Sbjct: 157 KIIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNSLGFIDSSRHFVPFDEKF 216

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L          +           SDH P
Sbjct: 217 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKDAL-------FSMHLLPEARDWPPPSDHVP 269

Query: 298 ISIDYDF 304
             ++++F
Sbjct: 270 YFVNFNF 276


>gi|228476989|ref|ZP_04061627.1| exodeoxyribonuclease III [Streptococcus salivarius SK126]
 gi|228251008|gb|EEK10179.1| exodeoxyribonuclease III [Streptococcus salivarius SK126]
          Length = 275

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSR------AVIDTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++        S  +     +       K       +YP +GA  +    G  
Sbjct: 55  KHLQILEDYFPDYDNTWRSSVEPARKGYAGTMFLYKKELNPVITYPEIGAPSTMDCEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        ++  
Sbjct: 114 -----IITLEFDNFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        +         A 
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNLLAKGFTDTYRHLNGDVTGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|115481988|ref|NP_001064587.1| Os10g0412100 [Oryza sativa Japonica Group]
 gi|78708623|gb|ABB47598.1| endonuclease/exonuclease/phosphatase family protein, putative,
           expressed [Oryza sativa Japonica Group]
 gi|78708624|gb|ABB47599.1| endonuclease/exonuclease/phosphatase family protein, putative,
           expressed [Oryza sativa Japonica Group]
 gi|113639196|dbj|BAF26501.1| Os10g0412100 [Oryza sativa Japonica Group]
          Length = 605

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/351 (13%), Positives = 91/351 (25%), Gaps = 65/351 (18%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           + +      ++S+NI  +  +  +  S         T     L +      ADI+ LQE+
Sbjct: 247 SQTSFGTFSVLSYNILADAYATSDAYSYCPTWALSWTYRRQNLMREIIGYHADIICLQEV 306

Query: 75  GSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                 +  +    K+ +   Y       ++      D       R K   V +      
Sbjct: 307 QLNHFEDFFSPELDKHGYQALYKKRTTEVYTGAPHAIDGCATFFRRDKFSHVKKYEVEFN 366

Query: 132 GAKDSFSRA-----GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT---------- 176
            A  S + A       R A+  L++ N   I VL+    +    +  +            
Sbjct: 367 KAAQSLTDAIIPSTQRRVALSRLIKDNVALIAVLEAKFGNHGTDNPGKRQLLCVANTHVN 426

Query: 177 -YSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNN------------- 221
            +     +   + Q L   + +    + +P ++ GDFN       +              
Sbjct: 427 VHQDLKDVKLWEVQTLLKGLEKIAVSADIPMLVCGDFNSVPGSSPHGLLAMGKVDQLHPD 486

Query: 222 -----------------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                                               D      R     +     N    
Sbjct: 487 LAIDPLGILRPASKLTHQLPLVSAYSSFARMVGVGYDLEHQRRRMDPATNEPLFTNCTRD 546

Query: 253 NKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               +DY     +      + E   E    +D      +  SDH  +  ++
Sbjct: 547 FTGTVDYIFYTADSLSVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 597


>gi|163753486|ref|ZP_02160610.1| exodeoxyribonuclease III [Kordia algicida OT-1]
 gi|161327218|gb|EDP98543.1| exodeoxyribonuclease III [Kordia algicida OT-1]
          Length = 253

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 92/302 (30%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                 +      ++ +  + D++ +QE  +      +
Sbjct: 1   MKIISYNVNGIRA---------------AIRKGFLEWLQQANPDVLCIQETKAQKEQLDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y+                ++ +A+  K     + +  + G          R
Sbjct: 46  EAFEQAGYKYNYWYSAQ-------KKGYSGVAILCK----EEPNNVVYGTGIETMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + ++   I ++ ++L S               +   Q    +K+++   ++ + 
Sbjct: 95  N-----LRVDYDNISIMSMYLPSGTND--------ARLNFKFQYMDEIKEYLANLRKEIP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP-------------NDSLIRFPKEKDSRCNANKN 250
             V+ GD+N     +  ++   K +               +   I   +  +   +    
Sbjct: 142 NLVVCGDYNICHEEIDIHNPKMKGVSGFLPEERAWIGSFIDSGFIDSFRHLNKEPHHYSW 201

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           IDY ++ +     + + +                + SDHCPI ++
Sbjct: 202 WSYRANARANNKGWRIDYNMVGKALKDNITRATIL-----------PEAKHSDHCPILVE 250

Query: 302 YD 303
            D
Sbjct: 251 ID 252


>gi|311347486|gb|ADP90688.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
          Length = 518

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 76/331 (22%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         +            + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +      A  V                    G  D 
Sbjct: 59  PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184
           F++   R                  E   K + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSN 231

Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                               + L     +DY + D+        
Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARYLNYGSRLDYVLGDRTL------ 285

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +          SDHCP+     
Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312


>gi|74316463|ref|YP_314203.1| endonuclease / exonuclease / phosphatase family protein
           [Thiobacillus denitrificans ATCC 25259]
 gi|74055958|gb|AAZ96398.1| endonuclease / exonuclease / phosphatase family protein
           [Thiobacillus denitrificans ATCC 25259]
          Length = 251

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 83/283 (29%), Gaps = 52/283 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +Q + + S+NI+             S          LR     L  DIVFLQE+   + +
Sbjct: 2   SQALHIASYNIH----------KGMSQFNRRLMVHELRDRLGGLGTDIVFLQEVQGSHGL 51

Query: 81  A----KVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + +P      F + +   +  + K    +  H   A+  +      +        
Sbjct: 52  RASRFQHWPGRPQHEFLAGQIYTDFAYGKNCVYDTGHHGNAILSRYKITSWE-----NEN 106

Query: 135 DSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            S     +R  +   +E+ G    +  +++HL                     +Q   + 
Sbjct: 107 ISAHAFESRGMLHCEIEVPGLGTPVHCINVHLGLT-------------ARGRKRQLAMIA 153

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           D + +      P ++AGDFN                D       F   +     +  ++ 
Sbjct: 154 DRVHKLVPDDAPLILAGDFNDWQMRACRY-----FNDELGLSEVFGTHQGKPARSYPSIF 208

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
               +D   +          ++            +  + +SDH
Sbjct: 209 PLFQLDRIYVR-----RFTVKAVEVHS------GTLWRGVSDH 240


>gi|50954256|ref|YP_061544.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950738|gb|AAT88439.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 278

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 85/318 (26%), Gaps = 80/318 (25%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++ +R+ + N+N +                 +    +  +    D DI+ +QE+ +    
Sbjct: 3   SEHLRVATINVNGIRA---------------AFRRGMGTWLDARDVDILAIQEVRASTDD 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                 + W I +                    +A+  +   V+ ++       DS  R 
Sbjct: 48  LLGLLGDEWDILHDPATAKG----------RAGVAIASRRRAVVHRAGLGPAGFDSAGRW 97

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +E   E+ GK I V+  ++ S       +                ++  +     
Sbjct: 98  -----LEADYEVGGKAITVVSAYVHSGEAGTPKQADK-------YTFLDAVEARLPVLAA 145

Query: 201 SLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRC 245
                V+ GD N     L   +                ++  I   +    +        
Sbjct: 146 HSEHGVVLGDLNVGHRTLDIRNWRGNVKRAGFLPEERAYFDRILGAEDEPGYNDGAGLGW 205

Query: 246 ------------NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                               +           IDY +              +   Y+ D 
Sbjct: 206 VDVGRKWAGEVDGPYTWWTWRGQAFDNDTGWRIDYQLATPALA-------ATVTDYSVDR 258

Query: 285 IKSRGKRLSDHCPISIDY 302
             S  +R SDH P+ +DY
Sbjct: 259 AASYAERWSDHTPVVVDY 276


>gi|238853021|ref|ZP_04643416.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4]
 gi|238834359|gb|EEQ26601.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4]
          Length = 275

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWNI++L+        +  + R       +    K  D DI+ +QE    +     
Sbjct: 1   MRLISWNIDSLNAALTSDSARAKLTRG------VLNTIKEKDPDIIAIQETKLRSTGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +     +  S  +     +       KN    + + P++ A +     G  
Sbjct: 55  KHQEILAEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLAPEVTKPVIAAPEPMDHEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +        +         ++  Q L            
Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQ--------NK 160

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GD+N                   +       +  +        F K   +     
Sbjct: 161 PVIASGDYNVAHTPIDLKHPESNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +    +           DHCPI
Sbjct: 221 SWWAQRVRTSKANNSGWRIDYYIVSNRIADQVTKSEMLDTGERK-----------DHCPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 MLEIN 274


>gi|190575838|ref|YP_001973683.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
 gi|190013760|emb|CAQ47395.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
          Length = 255

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 83/296 (28%), Gaps = 60/296 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVF 70
           +   + +RL++ NI   S     S +            R  S    +   A++   DIV 
Sbjct: 3   SPRTRTLRLLTANIQAGSSTRRYSDYVTRSWSHALPAGRKRSSLDAIATLARDH--DIVG 60

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           LQE    +  +    +  +    +     +H   R       +A  +  K   V  Q + 
Sbjct: 61  LQEADPGSLRSGFTNQTHYLAQRAGFNYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHA 120

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L G      R G R  +          + V   HL                      Q  
Sbjct: 121 LPG------RIGGRGVLLAKFGDGADGLAVAVAHLSLGAGS-------------RMSQLG 161

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247
           ++ + ++    +    V+ GDFN           + K            + +   C    
Sbjct: 162 FIAELLSDHPNA----VLMGDFNCLAERPEMQVLYQK-----------TRLQPPGCIVPT 206

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + R    ID+ ++        ++                    SDH  +++  D
Sbjct: 207 FPSWRPDRAIDHILVSSGLQTRTVEAVP--------------AAFSDHLALAMQID 248


>gi|163801448|ref|ZP_02195347.1| hypothetical protein 1103602000598_AND4_11284 [Vibrio sp. AND4]
 gi|159174937|gb|EDP59737.1| hypothetical protein AND4_11284 [Vibrio sp. AND4]
          Length = 447

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 88/299 (29%), Gaps = 32/299 (10%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +    S    +++ ++NI  +         + S+   +               D++ LQE
Sbjct: 172 IAEVESRDNALQVATYNIWMIPSVSSNIFTRASMMEHSL-----------SGYDVLALQE 220

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + S +       +  +    +            ++ I+    V      +L+    +   
Sbjct: 221 VFSRH------REPMFDALSAEYPYRTEVVGGDSHAIYDGGVVTLSRYPILESDALVFDH 274

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                   ++  V   ++ NG+   + + HL SF   ++          L +        
Sbjct: 275 CAGTDCYADKGIVYTKIDKNGEIYHIFNTHLASFDTREAKRLRRLQLGLLRTF------- 327

Query: 194 WITQKKESLVPFVIAGDFNRKINYL-GNNDDFWKTIDPNDSLIR----FPKEKDSRCNA- 247
            +T++       + AGDFN   N           T++ +            E      A 
Sbjct: 328 MLTKQIPDDEAVIYAGDFNIDKNSDFSEYLLMLATLEVDPPAYMGYTEATFEPKINPYAL 387

Query: 248 --NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      +DY  +     +     +  ++    +  +     LSDH  +  ++ F
Sbjct: 388 AKYSGGEKSEFLDYVFVSLEHRRASKNTNTVKLKQRINKDQWGQWHLSDHFSVVGNFTF 446


>gi|157414552|ref|YP_001481808.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81116]
 gi|157385516|gb|ABV51831.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81116]
 gi|315932053|gb|EFV11006.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 327]
          Length = 252

 Score = 76.5 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 1   MKLLSWNVNGLRAICDKNA---------------LDWIAQEQIDFIGFQEI---KAHEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 43  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +        L            
Sbjct: 91  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|256787199|ref|ZP_05525630.1| exodeoxyribonuclease (secreted protein) [Streptomyces lividans
           TK24]
          Length = 267

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 76/308 (24%), Gaps = 71/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + S N+N L                        ++     AD++ LQE+         
Sbjct: 2   LTVTSVNVNGLRAAAKKGF---------------VEWLAGTSADVLCLQEVR-------- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             +      ++      H             +++  +      +        D+  R   
Sbjct: 39  -AEPHQLPDHAGAPEGWHVTHAPAAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGR--- 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                +  ++ G  + V  ++L S       ++             + L++         
Sbjct: 95  ----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLAYLKELRERA---AAEG 145

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDP--NDSLIRFPKEKDSR 244
              V+ GD+N                         +   + +DP     +          
Sbjct: 146 REVVVCGDWNIAHREADLKNWRANKKNSGFLPEEREWLGRVLDPAEGGYVDVVRALHPDV 205

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY V         ++              +  +R SDH
Sbjct: 206 EGPYSWWSYRGRAFDNDAGWRIDYHVSTPGLAAKAVKGYVE-------RAATHAERWSDH 258

Query: 296 CPISIDYD 303
            P+++ YD
Sbjct: 259 APVTVVYD 266


>gi|241068614|ref|XP_002408486.1| Apurinic/apyrimidinic endonuclease, putative [Ixodes scapularis]
 gi|215492474|gb|EEC02115.1| Apurinic/apyrimidinic endonuclease, putative [Ixodes scapularis]
          Length = 266

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN                   +   LLR +    + DI+ LQE+         
Sbjct: 5   MKIVTWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETE---- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    +++     R
Sbjct: 45  ------KFPFDELSNLPYNFYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYYSDQAR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + +      ++ ++  +  F+ S +     +            ++++ KK    
Sbjct: 95  F-LEIKLSLPIGFCNIISLYAPNGSFIGSDKFVAKLAF------YDNFINYLSTKKSFDE 147

Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN     +                      +TI  +     +     S+    
Sbjct: 148 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEIEQKKLRTILNSGFEDLYRLMHPSKQE-F 206

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L            D      ++ SDH P+ 
Sbjct: 207 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 259

Query: 300 IDY 302
             +
Sbjct: 260 ASF 262


>gi|332666113|ref|YP_004448901.1| exodeoxyribonuclease III Xth [Haliscomenobacter hydrossis DSM 1100]
 gi|332334927|gb|AEE52028.1| exodeoxyribonuclease III Xth [Haliscomenobacter hydrossis DSM 1100]
          Length = 256

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 80/306 (26%), Gaps = 77/306 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LVS+N+N +                        ++ +    DI+ LQE  +      
Sbjct: 2   SLKLVSYNVNGIRSALNKGW---------------AEWVREHQFDIICLQETKASPEQVD 46

Query: 83  VFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           + P     +  ++ + +   +S   + +       +               G   +    
Sbjct: 47  LSPIADLGYHAYWHSAQKKGYSSVATFSKREPDQVI--------------AGCGMAKYDD 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R      +  +   + +L+ +  S    D  +           + A  L+        
Sbjct: 93  EGRI-----LRSDFGDLTILNCYFPSGTTGDVRQEFKMVFLEDFFKWAHELQK------- 140

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCN 246
                ++ GD+N        +D                      N       +  +    
Sbjct: 141 ERPKLIVLGDYNIAHTERDIHDPRGNKNSSGFLPEEREWLSKWFNSGFTDAFRFLNPDKV 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY  +  N    L   S  ++   E          SDHCP
Sbjct: 201 EYSWWSFRAGARKNNKGWRIDYQSVSDNLRDNL--RSARQMNEAEH---------SDHCP 249

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 250 VLVELD 255


>gi|290770111|gb|ADD61872.1| putative protein [uncultured organism]
          Length = 322

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 81/314 (25%), Gaps = 54/314 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDADI----- 68
            +  +N+  L +    +   +           + K+  S    L +   +L  D+     
Sbjct: 15  SVAFYNLENLFDTIHDAGKNDYEFLPDGSYQWTAKKYESKLQNLSKVLGSLSRDLVPEGP 74

Query: 69  --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             + + E  +   +  +  +     +                 I  A+    K   V   
Sbjct: 75  AFIGVAEAENSRVLEDLVKQPAISNYEFVHYEGP-----DRRGIDCALLYDPKQFSVTHS 129

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
              L    +  +    R  + +  ++ G+++ V+  H  S           SP     ++
Sbjct: 130 KLVLSTPFEGDTVHLTRGFLIVDGQLAGERVCVIVNHWPSR-------GAKSPVRVHAAR 182

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN-----NDDFWKTIDPNDSLIRFPKEK 241
           Q + LKD + +  +  +  ++ GD N                  +          +   +
Sbjct: 183 QVKALKDSLMR-SDKKLKLIVMGDMNDDPMDESMEVLGARKYPKQVKKGEFYNPWWETLE 241

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI------------------LYNED 283
           D               D  V+ +   K      +                          
Sbjct: 242 DKGVGTLLYRGKWNLFDQIVISKPLLKAKKGLRYDHNEVFIRDYLIQQDGKYKGSPLRTH 301

Query: 284 DIKSRGKRLSDHCP 297
             ++     SDH P
Sbjct: 302 GGRTWLNGYSDHLP 315


>gi|301121032|ref|XP_002908243.1| carbon catabolite repressor protein, putative [Phytophthora
           infestans T30-4]
 gi|262103274|gb|EEY61326.1| carbon catabolite repressor protein, putative [Phytophthora
           infestans T30-4]
          Length = 1180

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 97/344 (28%), Gaps = 64/344 (18%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            R++++NI     + ++            +    LL++  ++ +ADI+ LQE+   +  +
Sbjct: 250 FRVLTYNILAEIYATRQMYPYCPIWALSWSFRRELLKRELQSYNADIICLQEVQGDHYKS 309

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP------------ 129
              P      +       +         +       K+N  +L++ YP            
Sbjct: 310 FFAPMMEEWGYEGWYLKKSRESMGLEGKVDGCALFYKRNRFILKERYPVDFNDLANDFLT 369

Query: 130 --------------------LLGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHL 164
                                L   +   +   R      AV  +V  N + +       
Sbjct: 370 QVQTEYDLDYQGPSMAAREMFLSTLNKMRQRLQRDNVAQIAVLEVVPANNEVVARKSQSG 429

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDD 223
              C  +    +      +   Q   L   + +      +P ++ GDFN + +       
Sbjct: 430 PLICITNVHIFSNPKFPDVKMWQTNMLAKQLERVTLSRNLPTILCGDFNSEPSSAVYEFM 489

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNAN---------------------KNLRNKIPIDYFVM 262
               +  +   I+ P ++ +   A+                     +       +DY   
Sbjct: 490 TRNHVLLDHPDIQCPPQQLANIYASLDLEHNIGFASAYASVFGAEPEYTNYTGVVDYVWY 549

Query: 263 DQNA---YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  +  L       +           + LSDH P+ +D+ 
Sbjct: 550 TPETLTPFAGLKVHPPEVLEAYSKTALPNCQFLSDHIPLCLDFS 593


>gi|332022825|gb|EGI63098.1| Putative neutral sphingomyelinase [Acromyrmex echinatior]
          Length = 391

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 85/288 (29%), Gaps = 32/288 (11%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           N+ TL+      + +N  +R     + + +   + + DI+ LQE+ S N   ++  K   
Sbjct: 8   NVLTLNCWGIPYVSRNKNER----MSAIAEKCISREYDIICLQEVWSVNDFNQIKTK--- 60

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144
                 + ++ HS    +  + + I +  +        +                 G + 
Sbjct: 61  -----VQEVLPHSHYFHSGVLGSGICILSRYPIHDVMFHKWPLNGYVHKIHHGDWFGGKG 115

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +++    I V   HL +               +    QA     ++      +  
Sbjct: 116 VGLCKIKVFNMYINVYITHLHA-----EYNRENDEYMAHRVLQAFDTAQFVKMTSGGVDA 170

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN--------LRNKIP 256
            + AGD N +   L        +   +           + C  N            N   
Sbjct: 171 VIFAGDLNTEPQDLAYRIIRGVSGLADTCPDSQSHIGTNECANNSYTSSKLARTQPNGKR 230

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ID+ +   +    +   +F   L   + +  +    SDH  +     F
Sbjct: 231 IDHIMYLGSNTVKVEVTNFGHPL--PNRVPYKNFSYSDHEAVMATLKF 276


>gi|317154705|ref|YP_004122753.1| exodeoxyribonuclease III [Desulfovibrio aespoeensis Aspo-2]
 gi|316944956|gb|ADU64007.1| exodeoxyribonuclease III [Desulfovibrio aespoeensis Aspo-2]
          Length = 283

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 78/303 (25%), Gaps = 76/303 (25%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWN+N                         R +      D+V LQE  +     ++ P
Sbjct: 30  IYSWNVNGYRA---------------VIKKNFRDWLDGCGGDVVMLQE--TKAHPDQLAP 72

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +      Y+        K       ++ +A       +       +G  D+  +   R  
Sbjct: 73  EEREPDSYANHYWNWSRK----KKGYSGVACFANPEPLAVT----IGLPDARFQGEGR-- 122

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +      + +I+  +    D                AQ L+           P 
Sbjct: 123 ---VLHLEYPDFHLFNIYFPNGQMGDDRLAFKMGFYDAFLDHAQALRK--------TKPI 171

Query: 206 VIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           V+ GDFN                             + I      +   +  +       
Sbjct: 172 VVGGDFNTAHCEIDLKNPKANAERSGFLPEERAWIDRFIAHG--YVDTFRLFEDGPGHYS 229

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + +     +++      +             SDHCPI +
Sbjct: 230 WWSYRFNARQNNAGWRIDYFFVSEELRPKVVRAWIEPEVP-----------GSDHCPIGV 278

Query: 301 DYD 303
           + D
Sbjct: 279 EID 281


>gi|304390853|ref|ZP_07372805.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304325736|gb|EFL92982.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 294

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 74/283 (26%), Gaps = 48/283 (16%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            + +N D+D++ LQE+ +     +      W +     R+   +         +      
Sbjct: 21  DWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRVKGRAGVALGARRDSD----W 76

Query: 119 KNVRVLQQSYPLLGAK--DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +  ++ +   P L A+          R     +    G    ++  +L S       +  
Sbjct: 77  EIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLVSAYLHSGELRTEKQEQ 136

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDD----------- 223
                  + ++ Q L         S  P   +I GDFN         +            
Sbjct: 137 KIAYLHRVGERVQQLSARAIAGVGSDTPQEALICGDFNIVRTARDIKNWKPNHNKTSGVM 196

Query: 224 ----------FWKTIDPNDSLIRFPKEK---DSRCNANKNLRNK---------IPIDYFV 261
                        T+  +  L      +               +           +DY +
Sbjct: 197 DEEIAFLDAWMADTLSGSKGLPCVDVGRALVGDTDGPYTWWSWRGKAYDNNAGWRLDYHM 256

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       +            +   R +DH P+++ YDF
Sbjct: 257 ATPGLAGQAQSAAV-------YRAPAYDARFTDHAPVTVTYDF 292


>gi|291545257|emb|CBL18366.1| exodeoxyribonuclease III [Ruminococcus sp. 18P13]
          Length = 256

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 79/299 (26%), Gaps = 78/299 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                         +    DAD   +QE     A    
Sbjct: 1   MKLISWNVNGLRACREKGFE---------------AFFAQEDADFFCIQETK-LQAGQIQ 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  ++            ++   ++  AV  K++ +  Q    L A +   R    
Sbjct: 45  LELPGYNQYW----------HYADKKGYSGTAVFTKHIPLSVQRDFGLPAHNGEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     ++++ ++ +                   +    L+ ++    ++  
Sbjct: 91  -----VLTLEYPDFYLVNAYVPN-------SKRELLRLDYRMEWEDALRQYL-LGLDARK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                             T+  +     F         A 
Sbjct: 138 PVIYCGDLNVAHREIDLKNPKSNRRNAGFTDEERGRLSTLLDSGFTDTFRLLYPDTAGAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                            IDYF++       +            D +  +    SDHCP+
Sbjct: 198 TWWSYMFHAREKNAGWRIDYFIVSNRIAPLVQ-----------DSLIYKDVLGSDHCPV 245


>gi|296454347|ref|YP_003661490.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183778|gb|ADH00660.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 286

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 81/311 (26%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81
            + + + N+N +                 +    +  +A    +D+  +QE+ +    V 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEDWAGKHASDVWCIQEVRAPQDDVD 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +    + +     +               + +      + ++      ++D  
Sbjct: 47  SIFDEFGFEYATAGKIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  I V  +++ +    D            L    + +     +
Sbjct: 107 S---GRWIETDVKTPEGYAITVASVYVHAGNTDD--PTKMEQKYRFLDTMLKRMGALRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +D  + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +       +   +  D   +  KR 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDKRW 274

Query: 293 SDHCPISIDYD 303
           SDH P++I Y+
Sbjct: 275 SDHAPLTITYE 285


>gi|163789004|ref|ZP_02183448.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
 gi|159875668|gb|EDP69728.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
          Length = 332

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 94/302 (31%), Gaps = 55/302 (18%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
               F +         + L+S+N+ +                  +  T +++   +++ D
Sbjct: 76  LFFQFSLNTNIKTKDSISLISYNVRSF-------KQPVHSDSQQNAITEIKKIVDSINPD 128

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           I+ LQE             +++      +   N       +   T + +  K   + +  
Sbjct: 129 ILLLQE-------------SSYKEGLRIKGYSNVFLGYRKDVQKTLLTIYSKYPIINKGF 175

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ- 186
                  ++        A+   ++I    + + + HL+SF F   +        + LS  
Sbjct: 176 IDFSDTYNN--------AIFADLKIKQDTVRIYNTHLQSFVFAPHIIADKYNDYNYLSNL 227

Query: 187 ------QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                 Q +  K       +S    +I GDFN   +Y        K ++ +     +   
Sbjct: 228 NSTISKQVEQAKLVKNHASKSNSKVIICGDFNAT-SYSQPYRILKKELNDS-----YVSN 281

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +        LR  + +DYF+ D+       +                   LSDH PI I
Sbjct: 282 GNGFGATYSLLRYPLRLDYFLSDKQIEVLSHKN--------------FDFNLSDHEPIYI 327

Query: 301 DY 302
            +
Sbjct: 328 KF 329


>gi|157803480|ref|YP_001492029.1| exodeoxyribonuclease III [Rickettsia canadensis str. McKiel]
 gi|157784743|gb|ABV73244.1| exodeoxyribonuclease III [Rickettsia canadensis str. McKiel]
          Length = 273

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 81/307 (26%), Gaps = 72/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+ A     DI+ LQE    +++   
Sbjct: 1   MKIVTWNINSL----------------RLRIDLLRKLAHEHKPDIILLQETKVADSL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       S    +  +A+  K       S  L  +          
Sbjct: 42  ------FPLEVIKNIGYEHIIYSGQKSYNGVAIISKFPLNNVFSLELYNSDKRH------ 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   V      I V + ++ +    D  +   +       +  + +++W+T  +    
Sbjct: 90  --IAATVN----DIEVHNFYVPAG--GDIPDIEINLKFKHKLEYVRLMQEWLTVNRTKND 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N   +                            +    +             
Sbjct: 142 KIIIVGDLNIAPHEHDVWSSRQLRNVISHTDIERSLLVGLQNSLGFIDSSRHFISLDEKF 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L          N           SDH P
Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSNNLKDAL-------FSINLLSEARDWVPPSDHVP 254

Query: 298 ISIDYDF 304
             ++++F
Sbjct: 255 YFVNFNF 261


>gi|119385102|ref|YP_916158.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222]
 gi|119374869|gb|ABL70462.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222]
          Length = 261

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 72/307 (23%), Gaps = 75/307 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
             + +WNIN                       L+ ++      DI+ LQE  S   N   
Sbjct: 2   FTIATWNIN----------------SVRLREALVARFLTEEAPDILCLQETKSPVENIPL 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  F                  +  +A+  K            G   +     
Sbjct: 46  EAFRALGYDHF-----------VARGQKGYNGVAILSKLPIEDAGDRDYAGLGHARH--- 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               V   +E     + + + ++ +    D  +   +            ++D      + 
Sbjct: 92  ----VAARLENG---VTIHNFYVPAG--GDIPDREQNVKFGQKLDFLTEMRDV--FHADR 140

Query: 202 LVPFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCN 246
               ++ GD N         ++    K +                   +   ++   +  
Sbjct: 141 PARSIMVGDLNIAPREDDVWSHKQLLKIVSHTPIEVEHLGAAQDAGKWVDITRKDIPQGL 200

Query: 247 ANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +            +D+     +                        ++ SDH 
Sbjct: 201 LYSWWSYRARDWDAADKGRRLDHIWATPDIANAGHNS-------RILRPLRGWQQPSDHV 253

Query: 297 PISIDYD 303
           P+   +D
Sbjct: 254 PVLASFD 260


>gi|301096675|ref|XP_002897434.1| 2',5'-phosphodiesterase, putative [Phytophthora infestans T30-4]
 gi|262107125|gb|EEY65177.1| 2',5'-phosphodiesterase, putative [Phytophthora infestans T30-4]
          Length = 574

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 91/342 (26%), Gaps = 63/342 (18%)

Query: 22  QKVRLVSWNINTLS-------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           +  R++S+N+           ++   S   + V + T    L+    +  ++D+V LQEM
Sbjct: 237 EAFRVMSYNVLYNGYATTDHAKKNLFSYVDDDVMKETRRIQLILHEIEENNSDVVCLQEM 296

Query: 75  GS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------IHTAIAVR-KK 119
           G     +    +     +  FYS +    +    +              I+ +IAV+   
Sbjct: 297 GEHVFNHFFKPMLASIGYHSFYSDKTGTTNEGCATFIRTSRFEVVEQETINLSIAVKNST 356

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                             +R  +   + +L         ++  +   F   D+       
Sbjct: 357 IPASQSLLQDFPELAKGIARIPSIAQLLILRSKLDPARTIILSNTHLFYRGDAHLIRLLQ 416

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------------NYLG 219
             ++       +  W  +        V+ GD+N                           
Sbjct: 417 GAAV----VDTVSQWKAKSSFENAAVVMCGDYNAHPRCALVAFLLDGQLDSSHRHWQQAP 472

Query: 220 NNDDFWKTIDPND----------SLIRFPKEK------DSRCNANKNLRNKIPIDYFVM- 262
           +       ID  D             RF                N        +DY ++ 
Sbjct: 473 SFRWNLSKIDDKDSKIQEKVTEVRPNRFEHSLQLVSACGIPAFTNYVTSFVDTLDYIMVG 532

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +      +   F+E     +         SDH  +  D  +
Sbjct: 533 SKTLQVRDVFPLFTEEQVTHEVALPSSTFPSDHISLVCDLTW 574


>gi|320163263|gb|EFW40162.1| hypothetical protein CAOG_00687 [Capsaspora owczarzaki ATCC 30864]
          Length = 326

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 85/316 (26%), Gaps = 31/316 (9%)

Query: 12  FLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           F    T + A    +VR++ +N       +   L +  +        LL Q     D DI
Sbjct: 14  FAASTTPASADMPRRVRILQFNTLADGLSDAFPLVEKRLLSWPHRSALLLQEILAHDPDI 73

Query: 69  VFLQEMGS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
             LQE+    +       ++ +   +  +R    +   +          R K    ++Q 
Sbjct: 74  ACLQEVDHFDDFFESELAQHGYTGIFKPKRDDGKADGCA------TFFKRSKFEVHIRQD 127

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGK--KIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                  D    +    A+  + +  G       +      F  L++         +   
Sbjct: 128 LEYRKVIDDKDVSQV--AILTVFKPAGVAPNADGIVSREGLFAVLNTHLKAKDEFEATRV 185

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNN-----------DDFWKTIDPND 232
           ++   + D + + +     +P VI+ D N +                    +   +    
Sbjct: 186 KEVSAVLDVLAKLQAQFPRIPMVISSDMNTEPTGPVYELLEKGLVSFSGSSYTHRLSLKS 245

Query: 233 SLIRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
           +   +             +R        IDY          +   +              
Sbjct: 246 AYALYKDGGGEPDYTTWKIRPPVEVARVIDYLWYTPETLLPIQLLALPGPETLPPTRLPS 305

Query: 289 GKRLSDHCPISIDYDF 304
               SDH  +  ++ F
Sbjct: 306 ENYPSDHFALLAEFGF 321


>gi|302867670|ref|YP_003836307.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|302570529|gb|ADL46731.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
          Length = 259

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 82/308 (26%), Gaps = 79/308 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +RL ++N+          +  +           L     +LDAD++ LQE+         
Sbjct: 1   MRLATFNLLHGRSLTDGLVDPD----------RLTAAVTDLDADVLALQEVDRDQTRSGK 50

Query: 79  -----AVAKVFPKNTWCIFYSTERLINHSKR------DSNNDIHTAIAVRKKNVRVLQQS 127
                  A+    +      +         R      D + +    I +  ++     Q 
Sbjct: 51  LDLTAVAARALHADHHRFAAAVVGTPGEQFRPLTHDDDGHGEPLYGIGLISRHPVRSWQV 110

Query: 128 Y-------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
                         P  G      R   R  +  +++     + V   HL      +   
Sbjct: 111 TRLRAAPIRSPIYAPGPGGGLVLLRDEPRVVLAAVLDTPHGPLTVAATHLSFVPGWN--- 167

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                           L+  +   +    P ++ GD N               +    + 
Sbjct: 168 -------------IWQLRRVVRVLRTLPAPRILLGDLN---------------LPAGPAA 199

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                +  +R       + ++ +D+ + D++    L   +                 +SD
Sbjct: 200 ALTRWQPLARRPTYPAGQPRVQLDHILADRHGLDRLPAVTAVHTPLAT---------ISD 250

Query: 295 HCPISIDY 302
           H P+ +D 
Sbjct: 251 HRPLVVDL 258


>gi|290963006|ref|YP_003494188.1| hypothetical protein SCAB_87261 [Streptomyces scabiei 87.22]
 gi|260652532|emb|CBG75665.1| putative secreted protein [Streptomyces scabiei 87.22]
          Length = 289

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 80/287 (27%), Gaps = 65/287 (22%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--- 81
           R+++WNI                    S+          +   ++ LQE    +      
Sbjct: 58  RVMTWNICN--------------PCDESNVDR-AAEIAAVAPQVIGLQEACVRDVERIRE 102

Query: 82  --KVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             + F    + + + S     +              A+        +     +GA+    
Sbjct: 103 YLETFHGLVYHVEYGSVLGSWSRCGGAPWKPGGFGQAILSAGPLTDR-----VGAEYPEG 157

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            + +R  + +   + G+ + + + HL                 ++ + Q   L + + + 
Sbjct: 158 GSEDRGYMAVTATVGGQPVRIFNTHL-----------AQRRQEAIRADQVDVLAEEVARH 206

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    ++ GDFN   +        WK     D+  R P   +  C    + +     D
Sbjct: 207 DRA----IVVGDFNAVPDSAEL-APMWKVAKDADTACRPP--SEGACGLTTDWQ--SKFD 257

Query: 259 YFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y  +       + +                      SDH  +  D D
Sbjct: 258 YVFLRGVSPLAQRVRLSE-----------------SSDHNLVYADVD 287


>gi|260654366|ref|ZP_05859856.1| endonuclease/exonuclease/phosphatase family protein [Jonquetella
           anthropi E3_33 E1]
 gi|260630999|gb|EEX49193.1| endonuclease/exonuclease/phosphatase family protein [Jonquetella
           anthropi E3_33 E1]
          Length = 282

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 92/291 (31%), Gaps = 37/291 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                A+   L ++NI   +            + T  D   L Q  ++  AD++ LQE+ 
Sbjct: 17  FQPLPAEAFSLGTFNIEYFAVTGQ-------KRYTPEDCAHLAQTIQDSRADLLSLQEIE 69

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              A+  +  ++     ++     +               +   +V     S+   G+  
Sbjct: 70  GDGAMTYLVARHLPGWRFAGNDTASSQDLYFLWKDSAVQMLSGPDVYFANASFQHDGSTF 129

Query: 136 SFSRAGNRRAVELLV--EINGKKIWVLDIHLK--SFCFLDSLENTYSPSCSLLSQQAQWL 191
              R  +R  +      + +G +  ++++HLK  S      + +  + + +  + Q + L
Sbjct: 130 ---RLFDRPPLVATFKDKASGFQFTLVNVHLKSQSTRGKSDVVSAKAYNDAKRAAQLEAL 186

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              ++       P  I GDFN       +    ++ +   D L                 
Sbjct: 187 DRLVSSL---NGPIFITGDFN-----YESPKTAFRLLTLPDGL-------------YSYD 225

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +  +D+         F    +  E   +         +  DH  + +D+
Sbjct: 226 ATRSSLDHI--GYAGLTFSRPPALREAESSIPRRSPGRSQHPDHDIVLLDF 274


>gi|325967886|ref|YP_004244078.1| exonuclease [Vulcanisaeta moutnovskia 768-28]
 gi|323707089|gb|ADY00576.1| exonuclease [Vulcanisaeta moutnovskia 768-28]
          Length = 246

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 81/299 (27%), Gaps = 73/299 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VSWNIN L              R+    + L +     + D+V LQE+ S   +   
Sbjct: 1   MRIVSWNINGL--------------RSIMRKSSLDKLLSMDNYDMVLLQEIRSSGDIPLT 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +        ++           +    K   +       +   DS  R    
Sbjct: 47  IIGLGYEAYPFPAIRKGYA----------GVMTLTKIHPISVIKGIGINELDSEGRI--- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V++ +        S  +     C  + +    L+        S  
Sbjct: 94  ------ITVEFNDFYVVNTYFPRAGDDLSRLDFKLSFCGAIEKFLANLR--------SKK 139

Query: 204 PFVIAGDFNRKIN--------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           P ++ GDFN   +               L       + +      I   +E         
Sbjct: 140 PIIMCGDFNIARDKIDSSFWDEKHPGLTLEERAWLNQFLKSG--YIDTFRELHPNAKVYT 197

Query: 250 NLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +       IDY ++ +     + +                    SDH P+ I+  
Sbjct: 198 WHSYREKWRAMRIDYCIVSKELMSKVRKAEILT-----------NIEGSDHVPVMIEVS 245


>gi|320528523|ref|ZP_08029680.1| exodeoxyribonuclease III [Solobacterium moorei F0204]
 gi|320131109|gb|EFW23682.1| exodeoxyribonuclease III [Solobacterium moorei F0204]
          Length = 251

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/305 (9%), Positives = 71/305 (23%), Gaps = 80/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++ +SWN+N L                         +    DAD   LQE     + +  
Sbjct: 1   MKFISWNVNGLRAAMKKGF---------------ADFFHEQDADFFALQETKMQPDQLED 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 + ++ ++     +S                       +   +    +       
Sbjct: 46  AMKFEGYHMYMNSAERKGYSGTLIYTK---------------HEPLSVTYEIEGDVTKEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     ++ +     + +  ++ +                +L +    L        +  
Sbjct: 91  R-----VITLEYPDFYFVCAYVPNSKDGLLRLPYRIEWEEMLRKHLMEL--------DKK 137

Query: 203 VPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +  GD N                   +          +  +     F +        
Sbjct: 138 KPVIYTGDLNVAHEEIDLKNPATNHKNPGFSDEERAAMTKLLDSGFSDTFRELYPDTQK- 196

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYF++ +     +      +               SDHCP+
Sbjct: 197 FSWWSYRMKARERNVGWRIDYFLVSERLLANVQDALIFDET-----------EGSDHCPV 245

Query: 299 SIDYD 303
            ++ +
Sbjct: 246 GLNIN 250


>gi|212541981|ref|XP_002151145.1| transcription factor, putative [Penicillium marneffei ATCC 18224]
 gi|210066052|gb|EEA20145.1| transcription factor, putative [Penicillium marneffei ATCC 18224]
          Length = 685

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/364 (11%), Positives = 92/364 (25%), Gaps = 79/364 (21%)

Query: 16  CTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            + + A K  ++S+N      +         +          L+    ++ DADI  LQE
Sbjct: 304 SSQAQADKFTVLSYNTLCDQSASPSHYGYVPSRALAWEFRRDLILNEIRSHDADIACLQE 363

Query: 74  MGS---YNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVL---- 124
           +          +    N +   Y      +  H +     D         K + +     
Sbjct: 364 IDQGNYNEFFREQLAYNDYKGVYWPRGRAMGMHEEEAKTVDGCATFFKASKYILLDKQMI 423

Query: 125 ------QQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLE 174
                  +     G  D ++R   +  + ++V     + G ++ V++ HL    +  + +
Sbjct: 424 NFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRMTGTRLIVVNAHL---YWDPAFK 480

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLV------------------------------- 203
           +      ++L ++   L +  ++                                     
Sbjct: 481 DVKLIQTAILMEEITKLSEKYSKFPPCTDKTAFRFSEAEDGAREATTPVEPAPSAEYSSG 540

Query: 204 ---PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC 245
              P +I GDFN        N                  +  +        F  +     
Sbjct: 541 DQIPLLICGDFNSAPGEAAYNLLAHGGLTEAHPDLEKRLYGNLSRVGMTHPFKLKSAYSA 600

Query: 246 -----NANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  N        +DY        +   +     +               SDH  + 
Sbjct: 601 IGELSFTNYTPDFNSILDYIWFSSTALHVTGLLGEVDKEYLQRVPGFPNYHFPSDHLALL 660

Query: 300 IDYD 303
            ++ 
Sbjct: 661 AEFS 664


>gi|86153870|ref|ZP_01072073.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842831|gb|EAQ60043.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 252

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 1   MKLLSWNVNGLRAICDKNA---------------LDWIAQEKIDFIGFQEI---KAHEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 43  FPKKIYEYPFKQMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +        L            
Sbjct: 91  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|290959716|ref|YP_003490898.1| exodeoxyribonuclease III [Streptomyces scabiei 87.22]
 gi|260649242|emb|CBG72356.1| putative exodeoxyribonuclease III [Streptomyces scabiei 87.22]
          Length = 267

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 74/308 (24%), Gaps = 73/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + S N+N L                        ++     AD+V LQE+         
Sbjct: 2   LTVTSVNVNGLRAAAKKGF---------------VEWLAGTSADVVCLQEVRAEPEQLPE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V     W + ++           +       +++  +      +        D   R  
Sbjct: 47  GVRQPEGWHVVHAP----------AAAKGRAGVSLYSRREPDRVRIGFGSAEFDGSGR-- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 +  ++ G  + V  ++L S       ++             + L++        
Sbjct: 95  -----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLPYLKDLRERA---AAD 144

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTID--PNDSLIRFPKEKDS 243
               V+ GD+N                         +   + +D      +         
Sbjct: 145 GREVVVCGDWNIAHQQADLKNWRANQKNSGFLPEEREWLGRVLDEGDGGYVDVVRALHPE 204

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           ID  V         ++          +   S  +R SD
Sbjct: 205 VEGPYSWWSYRGRAFERDTGWRIDLAVATPGLASKAVKAFV-------ERAASHDERWSD 257

Query: 295 HCPISIDY 302
           H P+++  
Sbjct: 258 HAPVTVVL 265


>gi|148554033|ref|YP_001261615.1| hypothetical protein Swit_1111 [Sphingomonas wittichii RW1]
 gi|148499223|gb|ABQ67477.1| hypothetical protein Swit_1111 [Sphingomonas wittichii RW1]
          Length = 351

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 90/311 (28%), Gaps = 39/311 (12%)

Query: 13  LVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            +P  A      + ++++N+  L          +++ R       LR         +V L
Sbjct: 38  ALPHPAPRGDAGLSVMTYNVEGLPWPARFGR-GDALARIGERLAALRA--TGAQPRVVLL 94

Query: 72  QEMGSYNAVA-KVFPKNTWCIFYSTERLINHS-----------------KRDSNNDIHTA 113
           QE  S +A A +    + +  F   + L                        S   + + 
Sbjct: 95  QEAFSDDAKAIRAASGHRYAAFGPDDALAGPPTRSPADRAFAAEASFLKGERSGKLLDSG 154

Query: 114 IAVRKKNVRVLQQSYPLLGAKD-SFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFL 170
           + +      +  +      A    +    N+  V  +V + G    I V+++HL S    
Sbjct: 155 LVILSDYPILSVRRAAFPAAACAGYDCLANKGMVMAVVAVPGAPGPIAVVNLHLNSKRAS 214

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                    + +   QQ   L  ++       +P ++ GDFN             + +  
Sbjct: 215 G---VAIERADAAFRQQVAALDRFLAANHVPGMPMIVGGDFNIG-RSAARRTMVMEVLAR 270

Query: 231 NDSLIRFPKEK------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
           +                    +A+     +   D+  +   A   L              
Sbjct: 271 HHGTAPADALSACTGVCRDGLSADAREARRRAKDWQFLIPGAAADLTVRRI----ATPFG 326

Query: 285 IKSRGKRLSDH 295
            ++ G  LSDH
Sbjct: 327 READGSMLSDH 337


>gi|218129905|ref|ZP_03458709.1| hypothetical protein BACEGG_01488 [Bacteroides eggerthii DSM 20697]
 gi|217988015|gb|EEC54340.1| hypothetical protein BACEGG_01488 [Bacteroides eggerthii DSM 20697]
          Length = 335

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/343 (11%), Positives = 91/343 (26%), Gaps = 61/343 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50
           M +   L    F V   A+   +     +  +N+  L +        +   L   S + T
Sbjct: 1   MRKVTFLFSFCFCVIVAAAQNTECKLYSIAFYNLENLFDTIHDAGKNDHDFLPDGSYQWT 60

Query: 51  TSDYT-----------LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
              Y             L +        ++ + E+ +   +  +  +     +       
Sbjct: 61  AKKYESKLHNLSMVLGSLSRNLVPEGPAVIGVAEVENRRVLTDLVSQPAISNYKFIHYEG 120

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
              +      I  A+    +   V      L    +  +    R  + +   +  +++ V
Sbjct: 121 PDKR-----GIDCALLYDPQQFTVTNSKLVLSTPFEGDTVHLTRGFLIVDGRLADERVCV 175

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S           SP     ++Q + L D +  +++  +   + GD N       
Sbjct: 176 IVNHWPSR-------GAKSPVRVHAAKQVKVLTDSL-LREDKKLKLFVMGDMNDDPMDES 227

Query: 220 N-----------------NDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIP 256
                              + +WKT++         + K +              +  + 
Sbjct: 228 MQTLGARKYISGMKAKQFYNPWWKTLEDKGVGTLLYRGKWNLFDQIVLSRPLVKTKKGLR 287

Query: 257 IDY--FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            D+    +     +      +          +      SDH P
Sbjct: 288 YDHNEVFIRDYLIQ--QDGKYKGSPLRTHGGRVWLNGYSDHLP 328


>gi|119192450|ref|XP_001246831.1| hypothetical protein CIMG_00602 [Coccidioides immitis RS]
 gi|121932279|sp|Q1EA11|CCR4_COCIM RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
          Length = 687

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/360 (10%), Positives = 87/360 (24%), Gaps = 81/360 (22%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K   +++N   +  +  +      +          LL    +  DADIV LQE+   + 
Sbjct: 310 NKFTALTYNTLCDRYATNQQYGYAPSRALAWEFRRDLLLNEIRGHDADIVCLQEIDQGSY 369

Query: 80  VAKVFPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRKK---NVRVL 124
                 +  +  +                         +       I + K      +  
Sbjct: 370 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKLVDGCATFFKGSKYILLEKNMIHFGQTA 429

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
            +     G  D ++R   +  + ++V     + G+++ V++       +  + ++     
Sbjct: 430 VRRPDAKGQDDIYNRLWQKDNIAVIVFLENRLTGERLIVVN---AHIYWDPAYKDVKLIQ 486

Query: 181 CSLLSQQAQWLKD------------------------------------WITQKKESLVP 204
            +++ ++   L +                                     +     S +P
Sbjct: 487 VAIMMEEVTQLAEKYVKIPPCTDKTAFRFSEPEDGKESQGTSTPVEPAPSVEYSSASQIP 546

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC---- 245
            ++ GDFN                           +  +        F  +         
Sbjct: 547 ILVCGDFNSCPGSAVYNLLAHGRMAEEHPDLEQRLYGNLSRMGMSHPFTLKSAYSTIGEL 606

Query: 246 -NANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              N        IDY     N      +     +               SDH  +  ++ 
Sbjct: 607 SFTNYTPGFTDVIDYIWYSSNTLQVTALLGEVDKEYLKRVPGFPNYHFPSDHLALMAEFS 666


>gi|329664474|ref|NP_001192653.1| deoxyribonuclease gamma [Bos taurus]
 gi|297488566|ref|XP_002697036.1| PREDICTED: deoxyribonuclease I-like 3 [Bos taurus]
 gi|296474868|gb|DAA16983.1| deoxyribonuclease I-like 3 [Bos taurus]
          Length = 305

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 92/293 (31%), Gaps = 32/293 (10%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +   A  +++ S+N+ +  E +  +              ++ +  K    DI+ L E+  
Sbjct: 14  STHSALALKICSFNVRSFGESKKANCNA---------MDVIVKVIKRC--DIILLMEIKD 62

Query: 77  YN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            +      + +    N+         + +   R++  + + A   ++K V V +QSY   
Sbjct: 63  SSNRICPTLMEKLNGNSRKGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KQSYLYH 120

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +   +   +R    +  +     +    I                 S   + + A   
Sbjct: 121 DYQAGDADVFSREPFVVWFQSPYTAVKDFVIVPLHTTPET--------SVREIDELADVY 172

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            D   +       F+  GDFN   +Y+         +  +   +    +++         
Sbjct: 173 TDVKRRWNAEN--FIFMGDFNAGCSYVPKKAWKDIRLRTDPKFVWLIGDQEDTTVKKSTN 230

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
                I   +  QN    ++ +S     + +    S  K L  SDH P+    
Sbjct: 231 CAYDRI--VLRGQNIVNSVVPQSNLVFDFQKAYRLSESKALDVSDHFPVEFKL 281


>gi|89070627|ref|ZP_01157907.1| exodeoxyribonuclease III, putative [Oceanicola granulosus HTCC2516]
 gi|89043774|gb|EAR49976.1| exodeoxyribonuclease III, putative [Oceanicola granulosus HTCC2516]
          Length = 262

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/305 (9%), Positives = 66/305 (21%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L +WNIN                       L+ +  +    D++ LQE  S      +
Sbjct: 3   FTLATWNIN----------------SVRLRAPLVLRLLEEEAPDVLCLQECKSPVEKMPL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         L            +  +A+  K       ++       +       
Sbjct: 47  EGFA---------ALGYRHVVARGQRGYNGVAILSKTPIEEVAAHDYASLGHARH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +E       V+  +       D  +   +            ++D      E   
Sbjct: 93  --IAGRLENG-----VVVHNFYVPAGGDKPDREVNEKFGQKLDYLAAMRD--AFHAERPE 143

Query: 204 PFVIAGDFNRKINYLG--NNDDFWKTID-------------PNDSLIRFPKEKDSRCNAN 248
             ++ GD N         ++    + +                   +   ++        
Sbjct: 144 RSILVGDLNVAPREDDVWSHKQLLRVVSHTPVEVNHFTDAQEAGGWVDVTRQDIPSGRLY 203

Query: 249 KNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+     +                        ++ SDH P+
Sbjct: 204 SWWSYRSPDWQAADKGRRLDHVWASADIASAAHGS-------RVLRDVRGWEQPSDHVPV 256

Query: 299 SIDYD 303
              +D
Sbjct: 257 FASFD 261


>gi|221102296|ref|XP_002154797.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 6
           [Hydra magnipapillata]
          Length = 516

 Score = 76.5 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/349 (10%), Positives = 98/349 (28%), Gaps = 55/349 (15%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           +  +   ++      ++S+N+ +                       + + +     +ADI
Sbjct: 163 WISIEPASTENGSFIVMSYNVLSDKHTNRQLYGYCPQWALNWDYRKSAILKEILQFNADI 222

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVL 124
           + LQE+ +        P+     +       + +K     +       A+  +     ++
Sbjct: 223 LSLQEVETEQYWNFFLPELKKNGYDGIFNPKSRAKTMPEEERRFVDGCAVFWQNTKFTLI 282

Query: 125 QQSY---------PLLGAKDSFSRAGNRRAVEL---------LVEINGKKIWVLDIHLKS 166
           ++              GA D  +R   R  + +         + E++  K  ++  +   
Sbjct: 283 KEHLVEFNQLAAAHAEGADDMVNRVMQRDNICVMALLEMIKPVPELDNIKPKIIVTNAHI 342

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----- 221
               +  +     +  L+ +  +++ +   + K   VP +I  D N  I+          
Sbjct: 343 HWDPEYRDVKVIQTLMLMRELKKFMDEITAEYKIEKVPNIICADMNSMIDSGAIEFLEHG 402

Query: 222 -----DDFWKTIDPNDSLIRFPKEKDSR-------------------CNANKNLRNKIPI 257
                   ++ +     L R+  +                          N        +
Sbjct: 403 RIPVSHPDFQKLKYGGYLSRYADKDKKGLEIITHPFNLSRAGKKNPLPFTNFTYDFTGVL 462

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDI--KSRGKRLSDHCPISIDYDF 304
           DY     +                ++ I         SDH  + +++DF
Sbjct: 463 DYIFYTSDINLLGELGQIDSEYLKKNKIIGFPHPHFPSDHIYLVVEFDF 511


>gi|288928983|ref|ZP_06422829.1| AP endonuclease domain protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288329967|gb|EFC68552.1| AP endonuclease domain protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 362

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 77/309 (24%), Gaps = 70/309 (22%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      ++++S+N                 +R       +  Y K  DADI+ LQE  
Sbjct: 93  NSNPTDSCLKVLSYN-----TFLWGGGEATEPQRWE-----MLNYVKEKDADILCLQEAN 142

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                          I+        +        I+  +A+  K   V  +      ++D
Sbjct: 143 LGGKFQATIDSLLNSIY-------PYHDIKEKTTIYDRLAIYSKYPIVRSERVMYPQSED 195

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHL------------------------KSFCFLD 171
                    +    V + G  + V++ H                         +      
Sbjct: 196 --------FSQACWVAMPGDTVLVVNNHFATTGLTEAQRQEFKSMLKGDLRTKQMPSLGK 247

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           SL +       + + Q Q +  ++   K      ++ GDFN       +           
Sbjct: 248 SLVHKLGEYAKIRAPQVQCVAQFVR--KRKGQSIILCGDFNDSPISYAHRCM------AK 299

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +    +    +    +       + ID  +   +                          
Sbjct: 300 ELTDCYVASGNGPGISYHRNAFYVRIDNIMCSDDWQPLKCVVENKVKT------------ 347

Query: 292 LSDHCPISI 300
            SDH PI  
Sbjct: 348 -SDHYPIFC 355


>gi|229095084|ref|ZP_04226080.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
 gi|229101186|ref|ZP_04231952.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
 gi|229114038|ref|ZP_04243464.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
 gi|228669497|gb|EEL24913.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
 gi|228682314|gb|EEL36425.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
 gi|228688414|gb|EEL42296.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
          Length = 263

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHTIIKEDTFFISENKDTTYWK-TRKIVSATIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFQGQVDRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  V +Q+      +  
Sbjct: 183 EGYEYLMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIVCNQSKRVRSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNV---------ISDHFGVEVQLD 262


>gi|297205315|ref|ZP_06922711.1| exodeoxyribonuclease III [Lactobacillus jensenii JV-V16]
 gi|297149893|gb|EFH30190.1| exodeoxyribonuclease III [Lactobacillus jensenii JV-V16]
          Length = 299

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 81/303 (26%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++L+        +    R       +         DI+ +QE            
Sbjct: 27  LISWNIDSLNAALTSDSARAQKTRH------VLTQIAEKKPDILAIQETKLRATGPTKKH 80

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                  +     +  S  +     +       KN      +YP +GA D+    G    
Sbjct: 81  AEILAKLFPDYEYVWRSSEEPARKGYAGTMYLYKNTLEPVVTYPTIGAPDTMDFEGR--- 137

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +   + +V  ++  +                   +  Q L        +   P 
Sbjct: 138 ---IITLEFPEYFVTQVYTPNAGGELKRLGDRQGWDKKYIEYLQKL--------DKEKPV 186

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +        F K   +       
Sbjct: 187 LASGDYNVAHEEIDLKHPENNHHSAGFTDEERADFTELLSTGFTDSFRKIHGNIPEVYSW 246

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY++        + +           ++   G+R  DHCPI +
Sbjct: 247 WAQRIKTAKANNSGWRIDYWLTSNRIADKIKKS----------EMMDTGERA-DHCPIVL 295

Query: 301 DYD 303
           + D
Sbjct: 296 EID 298


>gi|325694998|gb|EGD36902.1| exodeoxyribonuclease [Streptococcus sanguinis SK150]
          Length = 275

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  +    G  
Sbjct: 55  KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E +G   +V  ++  +        +      +  ++    L        +   
Sbjct: 114 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLGTL--------DKQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|315605969|ref|ZP_07881000.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312251|gb|EFU60337.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 776

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/344 (10%), Positives = 77/344 (22%), Gaps = 64/344 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVS--LWKNSVKRTTS-------------------- 52
           P   ++    R+ ++N+       GV          RT +                    
Sbjct: 362 PSAPTLGGDTRVATFNVLNYFSDLGVDEAGCTGYPDRTGAFVTTKKCRVRGAYSREAFAN 421

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSY----------NAVAKVFPKNTWCIFYSTERL--IN 100
               +      L A +V L+E+ +            ++A++          +        
Sbjct: 422 QEAKIVSAINALGAHVVALEEIENPVGVGVGTDRDASLARLVSALNTAAGTAEWAYVPSP 481

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                  + I  A   +   V  +  S        +                +     V+
Sbjct: 482 PITPAGEDVIRVAFIYKPAIVTPVGDSLIHDDPAFAGLARQPLAQEFARTGASSSSFVVI 541

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK------DWITQKKESLVPFVIAGDFNRK 214
             H KS   +       +         A  ++            + +  P ++ GDFN  
Sbjct: 542 ANHFKSKGSVPDGAGEGNRDNGDGQGNANAIRVAQASALAAFAARFADKPTLLVGDFNSY 601

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                      +          + +       +         +D+   +  A   L   +
Sbjct: 602 SQEDPVRALTARG---------WERVSGQGEASYVYSGRSGSLDHVFANAAAKSLLAGVT 652

Query: 275 FSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303
              +   E                       R SDH P  I   
Sbjct: 653 SWAVNAQESVAFEYSRAGMNAHLRIEADNPYRSSDHNPEIIGLT 696


>gi|150003564|ref|YP_001298308.1| hypothetical protein BVU_0993 [Bacteroides vulgatus ATCC 8482]
 gi|149931988|gb|ABR38686.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 359

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/336 (11%), Positives = 88/336 (26%), Gaps = 85/336 (25%)

Query: 3   RKYVLALVFFLVPCTASV---------------AQKVRLVSWNINTLSEQEGVSLWKNSV 47
           RKY L L F  + C+                     ++ +S+N     +    +    + 
Sbjct: 66  RKYAL-LSFLGLVCSIGAIRTYFPVNVFVSDVPEGAIKFLSYNTMAFEKNRANTKDNPNP 124

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                    + +Y +N +ADI+ LQE         +                   K    
Sbjct: 125 ---------VLEYLRNSNADIICLQE--------YIVGGRLTKKEVDYALRDYPYKNYHK 167

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 +    +   +           +         ++   +++NG  + +++ HL+S 
Sbjct: 168 ISGANGLGCYSRFPILSAHPVKYASLNN--------GSIAYKIKVNGDTLLIVNNHLESN 219

Query: 168 CFLDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVP 204
              +  +  Y                         + ++ + QA  +   +   K     
Sbjct: 220 KLTEKDKEVYREMMKDPDKQKVSQGSRLLIGKLAEASAIRAVQADSIARLVAGYKGGG-- 277

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GDFN        +    + ++                N          ID  ++ +
Sbjct: 278 IIVCGDFNDSPISYT-HRVVGEGLNDAFVESGNGFGISYNQNHFYF-----RIDNILLSK 331

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           N   +                     + SDH PI  
Sbjct: 332 NLKSYRCTV-------------DNTIKSSDHYPIWC 354


>gi|268608445|ref|ZP_06142172.1| exodeoxyribonuclease [Ruminococcus flavefaciens FD-1]
          Length = 248

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 69/303 (22%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N                           +    DADI  +QE       A  
Sbjct: 1   MKLISWNVNGFRACLTKGFG---------------DFFAEADADIFCIQETKMQPDQADF 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+     F+S                ++  AV  K   +           D        
Sbjct: 46  SPEGYHKYFHSAI-----------KKGYSGTAVYTKKEPLSVTFGINGEHTDEGR----- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  + +  ++ +        +        +      L        +   
Sbjct: 90  -----VITCEYEDFYFVGCYVPNAQNELKRIDYRMEFEDAMRGYLSEL--------DKKK 136

Query: 204 PFVIAGDFNRKINYLGNNDDFWKT----IDPNDSLIRFPKEKDSRCNA----------NK 249
           P +  GD N   N +   +             +             ++            
Sbjct: 137 PVIYCGDLNVAHNEIDLKNPKSNVGNAGFSDEERGKFTELLAAGFSDSYRSLYPEKIEYS 196

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYFV+       +                      SDHCP+ +
Sbjct: 197 WWSYRFKAREKNIGWRIDYFVVSDRFMPRVKDSQILT-----------DVTGSDHCPVQL 245

Query: 301 DYD 303
             +
Sbjct: 246 IIE 248


>gi|164660056|ref|XP_001731151.1| hypothetical protein MGL_1334 [Malassezia globosa CBS 7966]
 gi|159105051|gb|EDP43937.1| hypothetical protein MGL_1334 [Malassezia globosa CBS 7966]
          Length = 765

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/338 (9%), Positives = 85/338 (25%), Gaps = 57/338 (16%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++S+N+     +  +      +           + Q   + +A++  LQE+    
Sbjct: 416 SNTFAVLSYNVLCEKYATAQMYGYTPSWALAWNYRKEFILQEIVSYNAEVYCLQEVEMGQ 475

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI----HTAIAVRKKNVRVLQQSYPLLGAK 134
                 PK     +       + ++   +++       A   +  +  ++ +        
Sbjct: 476 FNDYFEPKLKQHGYEGIFWPKSRARTMRDDERQHVDGCATFYKSDSFELVDKQLIEFNQI 535

Query: 135 DSFSRAGNR-------------RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                   R              A+  ++E       ++  +     +     +      
Sbjct: 536 ALQRPDFKRTEDIFNRVMTKDNVALIAMLENRTSGYKLIVANAHM-HWDPEFRDVKLVQA 594

Query: 182 SLLSQQAQWLKDWITQKKES----------------LVPFVIAGDFNRKINY-------- 217
           ++L +Q +   +   +                     +P ++ GDFN   +         
Sbjct: 595 AMLLEQLEVTGNRFAKMLPQVKLTQGRQPPKYSSGMQIPTLVCGDFNSTPDSGVYEFMSK 654

Query: 218 ---LGNNDDFWKTI-----DPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVM-DQ 264
               GN++DF   I               +            N     +  IDY      
Sbjct: 655 GSAPGNHEDFMNHIYGTYTSEGLKHNYAMRSAYGNVGELPFTNLTPGFQGVIDYIWYTSN 714

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +         +           SDH  I  ++
Sbjct: 715 TLAASCLLGEVDRTYLSRVVGFPNAHFPSDHVCILAEF 752


>gi|99079894|ref|YP_612048.1| exodeoxyribonuclease III [Ruegeria sp. TM1040]
 gi|99036174|gb|ABF62786.1| exodeoxyribonuclease III [Ruegeria sp. TM1040]
          Length = 262

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/306 (9%), Positives = 67/306 (21%), Gaps = 71/306 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L +WNIN                       ++ +  +    D++ LQE  S      
Sbjct: 2   SFTLATWNIN----------------SVRLREPIVVKLLEEEGPDVLCLQECKSPV---D 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P   +        +            +  +A+  +                +      
Sbjct: 43  KIPMEAFRALGYEHMI------ARGQKGYNGVAILSRLPIEDVGDKDFASLGHARH---- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   +E     + + + ++ +    D  +   +            ++DW   ++   
Sbjct: 93  ---VAGRLENG---VTIHNFYVPAG--GDEPDREKNVKFGQKLDYLTEMRDWFHAERPEK 144

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
              V+ GD N         D                    +          ++       
Sbjct: 145 S--VLVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLDQVMDAGGWADVTRKDIPEGQL 202

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+     +                        ++ SDH P
Sbjct: 203 YSWWSYRAKDWDAADKGRRLDHVWTTADITNAAHSS-------RILRHARGWEKPSDHAP 255

Query: 298 ISIDYD 303
           +   +D
Sbjct: 256 VFATFD 261


>gi|320170015|gb|EFW46914.1| hypothetical protein CAOG_04872 [Capsaspora owczarzaki ATCC 30864]
          Length = 680

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 93/329 (28%), Gaps = 61/329 (18%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
                 T S A  +++VS+NI   + +           +  S    +        ADIV 
Sbjct: 373 LTAAAPTRSSAAPLKVVSFNIWNANGRG--------EAKYNSRMDHIGSILHEAQADIVA 424

Query: 71  LQEMGSYNAVAKVFPKNTWC---------IFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           LQE+   +++    P                ++ +  +++    +       +A+  +  
Sbjct: 425 LQEVRFDDSLVHSLPPANQASDLLRYLPGYQFAFQPAMSYPLDLTGRVEE-GLAIYSRYP 483

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            +      L    +       R      +++    +  + +   S       ++  S + 
Sbjct: 484 ILNTGYLLLPRIPEDPH---QRILFHAEIDVPSVGVVDVVVSHFSLV-----DSARSVAA 535

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
             +    + L        +S  P +  GD N                          D W
Sbjct: 536 LRVYDFLRKLAR------DSPRPQLFMGDLNATPLSTAMQFLNGNVTLRNIRVGDMRDVW 589

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQES 274
             + P  S      +K      + +    +            IDY  + Q A    +   
Sbjct: 590 LALRPEPSYDPRTDDKLPHAPPSDHPLYGMTFNTHANFLSKRIDYMYLRQPAGSPSVLRP 649

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            S  +  +      G+  SDH  +  ++D
Sbjct: 650 RSIDVIGQH--PRDGQMPSDHVGLVAEFD 676


>gi|317401341|gb|EFV81978.1| endonuclease [Achromobacter xylosoxidans C54]
          Length = 262

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 71/270 (26%), Gaps = 59/270 (21%)

Query: 60  YAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           + +   AD++ LQE  +   +    +     +   +       +S               
Sbjct: 23  WMEKHAADVLCLQEIKVSDEDLTEDLRHPPGYTGHFHHAVKKGYSGVGIY---------- 72

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                        +G          R      +  + K + V+  +L S    D  +   
Sbjct: 73  ----LRDAAERVSIGLGCEEFDPEGRI-----IRADWKNLSVISAYLPSGSSGDERQQAK 123

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNND 222
                        L   + + K++   FVI GD+N                    L    
Sbjct: 124 YRFLDRFGPWIDEL---MHEHKKTGREFVICGDWNIAHKEIDLKNWKGNLKNSGFLPEER 180

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273
            +   +      +   +  D R +      N+           IDY +            
Sbjct: 181 AWLTDVFDKRGFVDVFRTIDERPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARSV 240

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +             + +R SDH P++IDYD
Sbjct: 241 AI-----------YKDERFSDHAPLTIDYD 259


>gi|239947023|ref|ZP_04698776.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921299|gb|EER21323.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 262

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN                   +   LLR +    + DI+ LQE+         
Sbjct: 1   MKIVTWNIN----------------SIKTRLNLLRNFLSKENPDILLLQEIKCETE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    +++     R
Sbjct: 41  ------KFPFDELSNLPYNFYVHGQKSYNGVAIISKFP----ADEIIKDFPNNYYSDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + +      ++ ++  +  F+ S +     +            ++++ KK    
Sbjct: 91  F-LEIKLSLPIGFCNIISLYAPNGSFIGSDKFVAKLAF------YDNFINYLSTKKSFDE 143

Query: 204 PFVIAGDFNRKINYLGNNDDFW---------------KTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN     +                      +TI  +     +     S+    
Sbjct: 144 KTIIGGDFNIAPFDIDVYSPKLLAETTCFTEIEQKKLRTILNSGFEDLYRLMHPSKQE-F 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L            D      ++ SDH P+ 
Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255

Query: 300 IDY 302
             +
Sbjct: 256 ASF 258


>gi|227530634|ref|ZP_03960683.1| exodeoxyribonuclease III [Lactobacillus vaginalis ATCC 49540]
 gi|227349415|gb|EEJ39706.1| exodeoxyribonuclease III [Lactobacillus vaginalis ATCC 49540]
          Length = 275

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++++     +  +    R+      +         D++ +QE          
Sbjct: 1   MKLISWNIDSINAALTGTSTRAEETRS------VLHKIAGKHPDVIAIQETKLSKNGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   ++   S  +     +               +YP +GA ++    G  
Sbjct: 55  KHLAVLQELFPDYQVAWRSSVEPARKGYAGTMYLYLKEYEPTVTYPQIGAPETMDDEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +V +++  +                   +  Q L            
Sbjct: 114 ---IITLEFPD--FFVTEVYTPNSGSGLKRLADRQVWDDCYREYLQKLDQ--------QK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                         + +  +        F      +  A 
Sbjct: 161 PVIASGDFNVAHESIDLAHPENNHHSAGFTDEEREHFTKLLAAGFTDSFRHLNPEKTGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       +   +  +                DH PI
Sbjct: 221 SWWAQRVITSKQNNSGWRIDYWLVSDRLADKIKNSTMIDSGERR-----------DHTPI 269

Query: 299 SIDYD 303
            +D D
Sbjct: 270 ELDID 274


>gi|121613613|ref|YP_999970.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|121504268|gb|EAQ73304.2| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 259

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 8   MKLLSWNVNGLRAICDKNA---------------LDWIAQEKIDFIGFQEI---KAHEDK 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 50  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +        L            
Sbjct: 98  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 145

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 146 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 205

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 206 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 254

Query: 300 IDYD 303
           I+ D
Sbjct: 255 IEID 258


>gi|315633964|ref|ZP_07889253.1| endonuclease/exonuclease/phosphatase [Aggregatibacter segnis ATCC
           33393]
 gi|315477214|gb|EFU67957.1| endonuclease/exonuclease/phosphatase [Aggregatibacter segnis ATCC
           33393]
          Length = 263

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 87/298 (29%), Gaps = 54/298 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79
           ++L++ N++  L +                   ++         DIV LQE+    S  A
Sbjct: 1   MKLLTLNVHAWLEDN------------QAEKIDIIADTIVEKGYDIVALQEVNQLMSAPA 48

Query: 80  VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +++   ++ + +               L   +     +     IA   +       ++  
Sbjct: 49  ISQALKQDNYGVVLLNKINQRARQKYSLFWSNSHIGYDKYDEGIAFLTRLPVYEVDAF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      +R+ + L VE  G+ +     H+                      Q   
Sbjct: 108 CSQHQRLDSILSRKILGLTVEYEGQLVDCYSCHINLPNCAGE-------------NQLDN 154

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
           + + + + +   +  ++ GDFN       N     K++   D+     ++          
Sbjct: 155 ILNIVERSQSQNLK-ILMGDFNTDAISDPNAYQKIKSLGLLDTFEMAEQKDSGITVEKAI 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  K    +  +DY  ++Q         +   +             +SDH  + ++  
Sbjct: 214 DGWKGHSEEKRLDYIFLNQ---------TKRVLSSQVVFNGKNKPVVSDHFGLEVELT 262


>gi|260464102|ref|ZP_05812296.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
 gi|259030087|gb|EEW31369.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
          Length = 284

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 83/285 (29%), Gaps = 54/285 (18%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T      + + S+N++     +              D     +  + +D D++ LQE  +
Sbjct: 31  TTGTTGTL-VASYNVHKCIGVDRKF-----------DPERTSRVIREIDPDVIALQEADN 78

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                            +    +  S     +  H  + + K+ V        L G    
Sbjct: 79  RFGDRDGLLDLPRLERETGLVPVPISATGKGHGWHGNVLLFKRGVVRDVHQIKLPGL--- 135

Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 R AV   +E++G + + V+  HL                    SQQA+ + D +
Sbjct: 136 ----EPRGAVVAEIEMDGSQTLRVIAAHLGLLRHS-------------RSQQARVVLDLM 178

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                   P ++ GD N         +         ++L      +        +    +
Sbjct: 179 N--SPDEKPTLLLGDLN---------EWRLGNRSALNTLHATFGPQPPAVPTFPSNLPLL 227

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +D  + +++            I   E       +  SDH P++ 
Sbjct: 228 ALDRIMTNRHGM----------IAAVEAHDTPLSRVASDHLPLTA 262


>gi|326789876|ref|YP_004307697.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
 gi|326540640|gb|ADZ82499.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
          Length = 263

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 82/269 (30%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAK------------VFPKNTWCIFYSTERLI 99
                L +  K  D D++ LQE+  +    +            V  +    +  +   ++
Sbjct: 18  DKINYLAKTIKENDYDVIALQEVSQHMLGKQFKGQLKTDNYVVVLQEALQKLGVNHYEVV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                         + +  K+  + ++S+ +   KD+ +   +RR V+  +   G++I  
Sbjct: 78  WDFAHIGFQVYEEGLCLLSKHPIIEEESFFVSQTKDTLNWK-SRRIVKATINYKGEEIDC 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL  +   +                A+   + +  K        + GDFN   N   
Sbjct: 137 YSCHLGWWEDEEEP--------------AKLQLNKLNAKLHPKRRAFLLGDFNNNANVRD 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              D+   +   D+ +    + +      K    +       +DY   +Q          
Sbjct: 183 KGYDYMLGLGWKDTYMLAKDKDNGVTVQGKIHGWEENAGGLRLDYIFTNQK--------- 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       S    +SDH  + ++ +
Sbjct: 234 VEVRSSKVIFNGSNKAVISDHHGVQVEIE 262


>gi|71004198|ref|XP_756765.1| hypothetical protein UM00618.1 [Ustilago maydis 521]
 gi|46095654|gb|EAK80887.1| hypothetical protein UM00618.1 [Ustilago maydis 521]
          Length = 663

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 84/321 (26%), Gaps = 61/321 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+  WNIN L   +G   W                   +L ADI   QE  M       
Sbjct: 1   MRITVWNINGLRTLKGYQPWYKLPDWE--------ACLDHLGADIACFQETKMTRKQLTE 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR------KKNVRVLQQSYPL-LGAK 134
            +    ++  F++      +S   +      +I ++       +       + PL     
Sbjct: 53  PMCILPSYNAFFNFHPTKGYSGTVTYVRKSVSIPLKAEQGITGRLSVTNVSTNPLIPNDP 112

Query: 135 DSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                A  R  V+  +        +  +LD+ L     +     T            Q L
Sbjct: 113 IGCIPADTRDDVDAQIWNALDEEGRCVLLDLGLFVLFNVYCPNETGPERLEYKMTYYQCL 172

Query: 192 KDWITQKKESLVPFVIAGDFN--------------------RKINYLGNNDDFWKTIDPN 231
            +   +  +     +I GD N                       +       F   + P+
Sbjct: 173 AERAHRLIQEGRQVMIVGDMNIIRDPIDHCDAEQSIKEHGWDDFHQHPARSWFQSFLAPH 232

Query: 232 DSLIRFPKEKDSRCNANKNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                  +   +                     + +DY +  +    ++        +Y 
Sbjct: 233 GKFHDVGRMYHADRKKMFTCWNTLIDARPANYGVRLDYTLATEGILPWIKGADIQADVY- 291

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                      SDHCPI ID 
Sbjct: 292 ----------GSDHCPIYIDL 302


>gi|148700527|gb|EDL32474.1| Traf and Tnf receptor associated protein, isoform CRA_d [Mus
           musculus]
          Length = 349

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 77/289 (26%), Gaps = 48/289 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +  ++WNI+ L                      +         D+VFLQE+      
Sbjct: 100 SSTISFITWNIDGLDGCN-----------LPERARGVCSCLALYSPDVVFLQEV------ 142

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +C +             +     TAI ++K  V+   Q              
Sbjct: 143 -----IPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNT-----K 192

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  + + V + G +  ++  HL+S               +   +Q + +   + +   
Sbjct: 193 MMRNLLCVNVSLGGNEFCLMTSHLEST----------REHSAERIRQLKTVLGKMQE-AP 241

Query: 201 SLVPFVIAGDFNRKINY-----LGNNDDFWKTIDPNDSLIR-FPKEKDSRCNANKNLRNK 254
                + AGD N +           ++ F             +  +  +  N       K
Sbjct: 242 DSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYK 301

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              D           + Q     +     +    G+  SDH  +    +
Sbjct: 302 HRFDRIFFRAEEGHLIPQS----LDLVGLEKLDCGRFPSDHWGLLCTLN 346


>gi|146305200|ref|YP_001185665.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
 gi|145573401|gb|ABP82933.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
          Length = 290

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/294 (10%), Positives = 77/294 (26%), Gaps = 62/294 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
                +RL+S+N+      +    +     +          +   +       D D+V L
Sbjct: 29  PSDGLLRLLSFNVQVGINTQRYHHYLTRSWQHLLPHAGRAGNLQRIGDLLA--DFDLVAL 86

Query: 72  QEMGSYNAVAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           QE+   +  +    +  +      +       +            +  R +   +     
Sbjct: 87  QEVDGGSLRSGYVNQVEYLAQQGAFPYWYQQLNRNLGRFAQHSNGVLSRLRPTLLEDHPL 146

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           P             R A+ L +      + V+ +HL                    ++Q 
Sbjct: 147 PGPPG---------RGAIFLQLGEGEHALCVVMMHLALG-------------ARTRTRQL 184

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
                +I ++       V+ GD N               +  N  L              
Sbjct: 185 A----YIRERVGEFRHLVLMGDMNTHAVD----------LLENSPLRDLGLIAPQAEATF 230

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + R +  +D+ ++        +                  + +SDH P++++ 
Sbjct: 231 PSWRPQRCLDHILLSSELELGRVDV--------------LSQPISDHLPVAVEI 270


>gi|74198542|dbj|BAE39751.1| unnamed protein product [Mus musculus]
          Length = 326

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 77/289 (26%), Gaps = 48/289 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +  ++WNI+ L                      +         D+VFLQE+      
Sbjct: 77  SSTISFITWNIDGLDGCN-----------LPERARGVCSCLALYSPDVVFLQEV------ 119

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +C +             +     TAI ++K  V+   Q              
Sbjct: 120 -----IPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNT-----K 169

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  + + V + G +  ++  HL+S               +   +Q + +   + +   
Sbjct: 170 MMRNLLCVNVSLGGNEFCLMTSHLEST----------REHSAERIRQLKTVLGKMQE-AP 218

Query: 201 SLVPFVIAGDFNRKINY-----LGNNDDFWKTIDPNDSLIR-FPKEKDSRCNANKNLRNK 254
                + AGD N +           ++ F             +  +  +  N       K
Sbjct: 219 DSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYK 278

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              D           + Q     +     +    G+  SDH  +    +
Sbjct: 279 HRFDRIFFRAEEGHLIPQS----LDLVGLEKLDCGRFPSDHWGLLCTLN 323


>gi|9507213|ref|NP_062424.1| tyrosyl-DNA phosphodiesterase 2 [Mus musculus]
 gi|67462082|sp|Q9JJX7|TYDP2_MOUSE RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
 gi|8247283|emb|CAB92971.1| putative TRAF and TNF receptor associated protein [Mus musculus]
 gi|56237843|emb|CAI26084.1| Traf and Tnf receptor associated protein [Mus musculus]
 gi|124376774|gb|AAI32512.1| TRAF and TNF receptor associated protein [Mus musculus]
 gi|124376776|gb|AAI32514.1| TRAF and TNF receptor associated protein [Mus musculus]
 gi|148700528|gb|EDL32475.1| Traf and Tnf receptor associated protein, isoform CRA_e [Mus
           musculus]
          Length = 370

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 77/289 (26%), Gaps = 48/289 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +  ++WNI+ L                      +         D+VFLQE+      
Sbjct: 121 SSTISFITWNIDGLDGCN-----------LPERARGVCSCLALYSPDVVFLQEV------ 163

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +C +             +     TAI ++K  V+   Q              
Sbjct: 164 -----IPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNT-----K 213

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  + + V + G +  ++  HL+S               +   +Q + +   + +   
Sbjct: 214 MMRNLLCVNVSLGGNEFCLMTSHLEST----------REHSAERIRQLKTVLGKMQE-AP 262

Query: 201 SLVPFVIAGDFNRKINY-----LGNNDDFWKTIDPNDSLIR-FPKEKDSRCNANKNLRNK 254
                + AGD N +           ++ F             +  +  +  N       K
Sbjct: 263 DSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYK 322

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              D           + Q     +     +    G+  SDH  +    +
Sbjct: 323 HRFDRIFFRAEEGHLIPQS----LDLVGLEKLDCGRFPSDHWGLLCTLN 367


>gi|302688375|ref|XP_003033867.1| hypothetical protein SCHCODRAFT_52565 [Schizophyllum commune H4-8]
 gi|300107562|gb|EFI98964.1| hypothetical protein SCHCODRAFT_52565 [Schizophyllum commune H4-8]
          Length = 625

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/320 (10%), Positives = 85/320 (26%), Gaps = 65/320 (20%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK------ 82
           +N+  ++                +    +  Y   L  DI+F+QE+   +          
Sbjct: 312 YNVENMAPTSSHI---------PAVAEHIASYL--LSPDILFVQEIQDNSGPTDDGTVSA 360

Query: 83  ---VFPKNTW--------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---- 127
              +                F                +I  A   R   ++++  S    
Sbjct: 361 NVTLVTLANAIKNISGVVYDFVDIAPKDGEDGGQPGGNIRQAYLYRADKLQLVSGSPAGT 420

Query: 128 -------------------YPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSF 167
                               P   A  + +   +R+ +    +  NG  ++ +++HL S 
Sbjct: 421 ALDAVEVQESSDGTPALNFNPGRIAPTNAAWDSSRKPLVAHWITPNGTSLFTINLHLTSK 480

Query: 168 CFLDSLENTYS----PSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNN 221
               +                + Q + +  ++      +     ++AGDFN         
Sbjct: 481 GGSSTTHANGRTPVNLGVEQRTSQVELVASFVGDILAVDPEANVIVAGDFNEYTQTRSVL 540

Query: 222 DDFWKTIDPNDS----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                     D     +       +         +N   +D+  +        ++     
Sbjct: 541 QALEDIGSGGDDGLIEIDEAAGLAEVERYTYVYDQNTQQLDHAFVSGAIAGRGVEVEHVH 600

Query: 278 ILYNEDDIKSRGKRLSDHCP 297
           +    + + +  +R+SDH P
Sbjct: 601 VN---NWVATYAERVSDHDP 617


>gi|224827230|ref|ZP_03700324.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002]
 gi|224600519|gb|EEG06708.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002]
          Length = 258

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 89/304 (29%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VS N+N +   +    +                +     AD+V +QE+       K 
Sbjct: 2   LRIVSANLNGVRSADKKGFF---------------DWLAGSQADLVCVQEL-------KA 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +      + + L  +    +    ++ + +  ++           G    +  A  R
Sbjct: 40  QPGDLSPRMQAPDGLTGY-FHCAEKKGYSGVGIYSRHEPDAVVE----GLGIGWIDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++++  ++ V+ ++L S    D  +        +       L+        +  
Sbjct: 95  Y-----LQLDFGELSVVSLYLPSGSSSDERQQVKFDFLDVFMPHLNELRA-------AGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCNAN 248
             VI GD+N   N +   +                    +          +         
Sbjct: 143 DIVICGDWNIAHNEIDLKNWKGNLKNSGFLPEERAWMGELLGEGGWHDVWRRLYPEVPGY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++  +  +     S             + ++ SDH P+ 
Sbjct: 203 TWWSNRGQAYAKDVGWRIDYHIVTPSMMECARAASV-----------YKDEKFSDHAPLI 251

Query: 300 IDYD 303
           +DYD
Sbjct: 252 VDYD 255


>gi|120402563|ref|YP_952392.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1]
 gi|119955381|gb|ABM12386.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1]
          Length = 270

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/278 (11%), Positives = 81/278 (29%), Gaps = 50/278 (17%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
            +R+  +  LL  + K   +D+V LQE     A  +   +    +      L +      
Sbjct: 16  KQRSVENLGLLA-WFKETASDVVCLQE---TRADDEQLGEALAPVLADGWHLAS---AAP 68

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
           +      +AV  ++     +    +G       A  R      +E++   + V  +++ +
Sbjct: 69  HVKGRNGVAVLSRSPFDDVR----IGCGAEEFAAHGRY-----IEVDTAGVTVGSVYVPT 119

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--- 223
                  +       + ++ +   L   + +  E     V++GD+N         +    
Sbjct: 120 GEAETDRQLEKERFMAAVAARMAVL---LARSVEDGRHAVLSGDWNIAHTENDIKNWKGN 176

Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                       +   +     +    +              +           IDY + 
Sbjct: 177 VKKAGFLPQERQWLTELLGTGWVDVVRQAHPDVAGPYAWWSWRGKAFDNDAGWRIDYQLA 236

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                  +   +        +   +   R SDHCP+++
Sbjct: 237 TPGLAGRVAAVT-------TERPAAYALRWSDHCPVTV 267


>gi|315657850|ref|ZP_07910730.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315491647|gb|EFU81258.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 286

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 83/312 (26%), Gaps = 58/312 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ +WN+N                   +    +  + +  + D++ +QE+   +     
Sbjct: 1   MRIATWNVN----------------SIRTRVNRVTAFLERENIDVLAMQEIKCRNDQFPT 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    + +F +     N     +   I   +   +    + Q   P         +  
Sbjct: 45  LAFETAGYQVFVNGLNQWNGVAVAARQGISAHLLGTEFYGSIDQ---PYFSVPPKPPQLE 101

Query: 142 NRRAVELLVEINGKKIWVLDI----HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R     +  +    ++V +     HL     L  L++  S     L    + L  ++  
Sbjct: 102 PRVLGVRVAGVECWSLYVPNGREVGHLHYQYKLKWLDSLRSHVIRTLDTDPESLGLYLGD 161

Query: 198 K--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF---------------PKE 240
                         DF    +        +  +   D++                   + 
Sbjct: 162 FNVAPRDEDVWDMADFAGATHVSEPERQVFAKLLDPDTVADAVTLHDDLIEGLPGNLTEI 221

Query: 241 KDSRCNANKNLRN---KIP------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                           +        ID+ +        +            D  +  G++
Sbjct: 222 TRKFAPGWTYWDYQRARWRRNQGMKIDFALATPRLASRVTGAYI-------DTAERDGEQ 274

Query: 292 LSDHCPISIDYD 303
            SDH P+ +D++
Sbjct: 275 PSDHAPVIVDFE 286


>gi|312384628|gb|EFR29312.1| hypothetical protein AND_01852 [Anopheles darlingi]
          Length = 499

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 76/326 (23%), Gaps = 68/326 (20%)

Query: 36  EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95
             +G                 L +     D DI+ LQE+  +  + K+     +   +  
Sbjct: 159 HNDGFVRCPLEALTWDCRRYQLVEEIIQNDPDIICLQEVDHFKFLQKILATQNYEGVFFP 218

Query: 96  ERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
           +          +N     A+  RK  + ++     +L      S      A+  ++    
Sbjct: 219 KPDSPCLYINGNNGPDGCAVFYRKDRLEMVNHFTRVLEVWRVQSNQ---VAIAAVLRTRD 275

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
            +  +            +L         L ++Q + L  +I        P ++ GDFN +
Sbjct: 276 TQQELCVTTTHLKARKGALL------SKLRNEQGKDLLHFIDG-IAQNRPVILCGDFNAE 328

Query: 215 INYLGN----------------------------NDDFWKTIDPNDSLIRFPKEKDSRCN 246
                                              +          +     +     CN
Sbjct: 329 PIEPIYSTVLNYRPLGLASAYADLLASEAHDENNQNAANAGRGAVRADRVSSRSSIGSCN 388

Query: 247 A-----------------------NKNLRNKI------PIDYFVMDQNAYKFLIQESFSE 277
                                       + +        IDY    Q+         F  
Sbjct: 389 GEECGQANGGARTRAEESAAHEPAYTTWKIREEGEVCHTIDYVFYSQDKLTVRNCLMFPS 448

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
                 D     +  SDH  +  D +
Sbjct: 449 GEEIGADRTPSFQYPSDHFSLVCDIE 474


>gi|121705342|ref|XP_001270934.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           clavatus NRRL 1]
 gi|119399080|gb|EAW09508.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           clavatus NRRL 1]
          Length = 604

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 87/346 (25%), Gaps = 74/346 (21%)

Query: 6   VLALVFFLVPCTASVAQKV---------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + AL       T++ A  +            S+NI+  S              T++    
Sbjct: 270 LTALSVTGSNSTSAAATNLVSDGTCSAVTFGSYNIDNFSS-------------TSATLPK 316

Query: 57  LRQYAKNL--DADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTER 97
           + Q+         IVFLQE+   +                              F     
Sbjct: 317 VAQHIAQYLKSPTIVFLQEIQDDDGPTDDGVVSANQTLASLAQSIADQGGINYNFVDINP 376

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRV------------------LQQSYPLLGAKDSFSR 139
           + +        +I  A       VR+                    +  P   A    + 
Sbjct: 377 IDDQDGGQPGGNIRVAYLYDPSVVRLHNPNPGSSTDANEVLPGAELKYNPGRIAPADAAW 436

Query: 140 AGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKD 193
              R+ +    E      K + +++H  S      +E    P      S  + QA+ +  
Sbjct: 437 DHCRKPLAAAWETLDGKNKFFTINVHFTSKLGGSPIEGDARPPVNGDVSTRAAQAEVVAA 496

Query: 194 WITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           + +    ++S    + AGDFN                     L        +        
Sbjct: 497 FTSSILAQDSKAKILTAGDFNEFAFAQPLESFVAD--SGLQDLDVVAGVASTERYTYLYD 554

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            N   +D+  +                  + +   S   + SDH P
Sbjct: 555 LNCQQLDHMFISPAL-----AAGAKMHHLHLNTWVSSSDQASDHDP 595


>gi|322517552|ref|ZP_08070421.1| RgfB protein [Streptococcus vestibularis ATCC 49124]
 gi|322123812|gb|EFX95386.1| RgfB protein [Streptococcus vestibularis ATCC 49124]
          Length = 271

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 75/284 (26%), Gaps = 54/284 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +     +  L++       DI+  QE+      A V     +    S             
Sbjct: 14  EDAEGKFQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHALPSATPIHQDHFVRLL 73

Query: 96  ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 + ++  +AV  +      +   L+   D  +    RR 
Sbjct: 74  VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTSSE--ILVSDVDDPTDYHTRRV 131

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                 ++G+++ V  +HL  +      E      C                 +    P 
Sbjct: 132 AVAETTVDGREVAVASVHLSWWDKGFQEEWARIEGC----------------FQSIGKPL 175

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260
           ++AGDFN      G        +   DS     +   S       +  K     + IDY 
Sbjct: 176 ILAGDFNNPAGREGYQAILASPLKLQDSFQVAQETNGSYTVGPGIDGWKGNEEPLRIDYV 235

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              Q          ++    +     +    +SDH  +  +  F
Sbjct: 236 FASQE---------WAVNHLSVIFDGNNQPLVSDHYGLEAELTF 270


>gi|220915579|ref|YP_002490883.1| exodeoxyribonuclease III Xth [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953433|gb|ACL63817.1| exodeoxyribonuclease III Xth [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 264

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 77/303 (25%), Gaps = 80/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    + ++      D+V LQE+ +  +    
Sbjct: 1   MKIGTWNVNG----------------IRAREAQVGEFIAREGPDVVCLQEIKAPPS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  S   L  +         ++ +A+  +     ++   +    D  +R    
Sbjct: 41  ------KVPPSLCELEGYWCLWHGETAYSGVALLVRKAIAPERPAFVHPPFDLETR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  E+ G  + V  I++ +               +   +  + ++ +    + S  
Sbjct: 91  ---IATCELGG--VTVASIYVPNGG----------KDLAAKLRFLEAMERFAADAQASGR 135

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N     L                     ++ I     +        +     
Sbjct: 136 RLVLCGDLNVARTDLDVHPKERKAGAIGQLPEERALFERILSRGLVDVGRALDPANEGLF 195

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDY              S S                SDH P+ 
Sbjct: 196 TWWAPWRNLRQRNIGWRIDYV-----------LASASLAASATRCRVLADFGTSDHAPVV 244

Query: 300 IDY 302
            ++
Sbjct: 245 AEF 247


>gi|150396093|ref|YP_001326560.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
 gi|150027608|gb|ABR59725.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
          Length = 287

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 80/283 (28%), Gaps = 53/283 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAV 80
             + + S+NI+     +G             D + + Q    + ADIV LQE        
Sbjct: 33  GDIVIASYNIHKCVGTDGRF-----------DPSRIAQVIAEIGADIVALQEADQRFGER 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A +              +      +  +  H  + + ++      +   L G        
Sbjct: 82  AGLLDLEHLRREAHLVSVPISPFTEKGHGWHGNVLLIREGAVSHVRQLKLPG-------V 134

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+ + +++    + V+  HL                    ++QA+ L         
Sbjct: 135 EPRGALVVDLDLKAGPLRVIAAHLGLLRHS-------------RARQAEMLLK--ASADG 179

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           +  P ++ GD N         +           L        +   +  +    +P+D  
Sbjct: 180 AGRPTLLIGDLN---------EWRMGKRSSLSFLSPMFDPSHAAVASFPSRFPLLPLDRV 230

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + + +     +          E       +  SDH P+    D
Sbjct: 231 LGNPHHLVTSV----------EVHDSPLARVASDHLPVKASID 263


>gi|320547311|ref|ZP_08041602.1| exodeoxyribonuclease [Streptococcus equinus ATCC 9812]
 gi|320448009|gb|EFW88761.1| exodeoxyribonuclease [Streptococcus equinus ATCC 9812]
          Length = 275

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAVLSR------AVIDTLVAEDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++   ++   S  +     +       KN      S+P +GA D+    G  
Sbjct: 55  KHLQILEDYFPDYQVSWRSSVEPARKGYAGTMFLYKNHLTPTISFPEIGAPDTMDYEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L            
Sbjct: 114 -----IITLEFDNFYVTQVYTPNAGDGLKRLTERQIWDEKYADYLAELDQ--------TK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N   N                       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHNEIDLANPNSNRRSAGFTDEERAGFTNLLAKGFTDTFRYLHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 SWWAQRSKTSKINNTGWRIDYWLASNRIADKITKSEMIDSGTRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|307353485|ref|YP_003894536.1| exodeoxyribonuclease III [Methanoplanus petrolearius DSM 11571]
 gi|307156718|gb|ADN36098.1| exodeoxyribonuclease III [Methanoplanus petrolearius DSM 11571]
          Length = 254

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 71/306 (23%), Gaps = 81/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LVSWN+N L   E                     +      DI+ +QE  ++      
Sbjct: 1   MKLVSWNVNGLRAVEKKGF---------------LDFVNEYQPDILCVQETKAHED---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +  S      +    S+     ++  A+  +           +   DS  R  
Sbjct: 42  ------QLSSSIRHPKGYFSYFSSAERKGYSGTALYSRFEPESISYGFGVPELDSEGRI- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +        + DI+  +                      +          +S
Sbjct: 95  --------IIAEYSDFNLYDIYFPNG-------KMSKERLQFKMDFYEECLRHAVSDLDS 139

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
               +I GD N     +                       + +D         +   S  
Sbjct: 140 GKNVIICGDVNTAHKEIDLARPKENSKVSGFLEIERKWIDRLLDAG--FKDSFRMFTSEG 197

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   K           IDYF +       +   S    +             SDHC
Sbjct: 198 GYYSWWDLKSGARERNVGWRIDYFFVSDGISGRVKSASILSQV-----------EGSDHC 246

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 247 PVELEL 252


>gi|227496831|ref|ZP_03927099.1| exonuclease III [Actinomyces urogenitalis DSM 15434]
 gi|226833664|gb|EEH66047.1| exonuclease III [Actinomyces urogenitalis DSM 15434]
          Length = 283

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 83/322 (25%), Gaps = 81/322 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +  +    + D++ +QE+         
Sbjct: 1   MRLATWNVN----------------SIRTRVDRVMAFLDRENIDVLAMQEIKCK------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +A+  +      ++          +  G  
Sbjct: 39  ----PEQFPREPFEAAGYELAVHGLNQWNGVAIASRVGLTDVETSFPGQPTWESASLGGA 94

Query: 144 R--AVELLVEINGKK------------------IWVLDIHLKSFCFLDSLENTYSPSCSL 183
              A  L V + G+                   + +  +++ +   L     TY      
Sbjct: 95  VVEARALGVTVGGQPAGSTPPPAPDAAAPACAPVRLWSLYVPNGRELTHPHYTYKLD--- 151

Query: 184 LSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIRF 237
                + L++ +     ++  +P  + GD+N         D         +   +     
Sbjct: 152 ---WLRTLREDVAAWLSEDPGLPLALVGDWNVAPRDEDVWDMVAFEGATHVSSPERAAFV 208

Query: 238 PKE-------KDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYN 281
             E         SR                   + ID+          +   +       
Sbjct: 209 AFEQVGMEEVTRSRVTNYTYWDYQKLRFPRNEGMRIDFVYASAALAARVRDAAI------ 262

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
            D  + +GK  SDH P+ ++ D
Sbjct: 263 -DRDERKGKGASDHVPVIVEID 283


>gi|156397458|ref|XP_001637908.1| predicted protein [Nematostella vectensis]
 gi|156225024|gb|EDO45845.1| predicted protein [Nematostella vectensis]
          Length = 563

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/325 (11%), Positives = 86/325 (26%), Gaps = 46/325 (14%)

Query: 24  VRLVSWNI-------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          +                    +L +     +ADI+ LQE G 
Sbjct: 235 IRCVSYNILADAYAREEFALNVLYPYCPPYALDIGYRKQVLMKELIGYNADIICLQECGQ 294

Query: 77  YNAVAKVFPKNTWCIFYSTERLIN---HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                 + P      +    +              +      ++  +V + +     L  
Sbjct: 295 KLFDGFLLPCMELEGYQGIIKCKAGEIPEGEAIFFNRDKFELIKTCDVVLRESLLSHLSQ 354

Query: 134 KDSFSRAGNRRAV------------ELLVE---INGKKIWVLDIHLKSFCFLDSLENTYS 178
           ++         A+              +++    N     +  ++   +    S      
Sbjct: 355 EEILQHISPIPALFESLIKRNAIAQVAVLKCKGNNDNSPLICVVNTHLYYRPHSPHIRML 414

Query: 179 PSCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINY------------LGNNDDF- 224
            +  +L+     + +  +++ ++  V  +  GDFN   +               ++D   
Sbjct: 415 QAAIILNHTKAVVHELTSERDDNIDVAVLFCGDFNSTPHTGLFQLLTKGHVARTHHDWLV 474

Query: 225 WKTIDPNDSLIRFPKEK------DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSE 277
            + +D + + +             +    N     K  +DY     +      +     E
Sbjct: 475 HEDVDQHCNTLDLSHGFSFVNACGTPLFTNYTHGFKDTLDYIFCDSKFFEVQSVVPLPEE 534

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
                          SDH  +  D 
Sbjct: 535 EELRNHLALPSVVMPSDHLALVCDL 559


>gi|150399093|ref|YP_001322860.1| exodeoxyribonuclease III Xth [Methanococcus vannielii SB]
 gi|150011796|gb|ABR54248.1| exodeoxyribonuclease III Xth [Methanococcus vannielii SB]
          Length = 257

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 77/303 (25%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N +                         +  + + +I+ +QE          
Sbjct: 9   MKMISWNVNGIRACLKNGFM---------------DFLNSKNPEIICIQETKVQKG-QVQ 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N +  +++      +          +  A+  K      +     G  +  S    R
Sbjct: 53  LGLNGYFEYWNYAEKKGY----------SGTAIFTKIEPKSVK----YGITNYKSDKEGR 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ ++++++  +                      + L+           
Sbjct: 99  -----VITLEFEEYFLVNVYTPNSQRGLKRLECRQKWDKDFLNHLKTLEQ--------KK 145

Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCN-------ANK 249
           P +  GD N     +   +         +   + N                         
Sbjct: 146 PVIFCGDLNVAHKEIDLKNPKQNIKNAGFTKEERNGFDNLINSGFLDTFRELNNEPENYT 205

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + +   + L        +             SDHCP+ I
Sbjct: 206 WWSYRFNAREKNIGWRIDYFCISKKLRERLKDAFIMSEVL-----------GSDHCPVGI 254

Query: 301 DYD 303
             +
Sbjct: 255 IIE 257


>gi|51473457|ref|YP_067214.1| exonuclease III [Rickettsia typhi str. Wilmington]
 gi|51459769|gb|AAU03732.1| E.coli exonuclease III [Rickettsia typhi str. Wilmington]
          Length = 261

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 76/307 (24%), Gaps = 72/307 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+ A     DI+ LQE    N++   
Sbjct: 1   MKIVTWNINSL----------------RLRIELLRKLAYEYQPDIILLQETKVANSL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       S    +  +A+  K       S  L            R
Sbjct: 42  ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKLPLNNVFSLELYNDDK-------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++  +     +V           D  +   +       +  + +K+W T  +    
Sbjct: 89  HIAAIVHGLEIHNFYV-------PAGGDIPDIEVNLKFKHKLEYVRLMKEWFTTNRTKND 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N   +                         +  +    +             
Sbjct: 142 KIIIVGDLNIAPHEHDVWSSKQMRNVISHTDIERSLLVELQNSLGFIDSNRYFISLDKKC 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L          N         R SDH P
Sbjct: 202 YTWWSYRNVDWKKSNRGRRLDHIWVSDNLKDAL-------FSMNVLSEARDWLRPSDHVP 254

Query: 298 ISIDYDF 304
             +   F
Sbjct: 255 YFVTLHF 261


>gi|159045536|ref|YP_001534330.1| hypothetical protein Dshi_2996 [Dinoroseobacter shibae DFL 12]
 gi|157913296|gb|ABV94729.1| hypothetical protein Dshi_2996 [Dinoroseobacter shibae DFL 12]
          Length = 302

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 85/291 (29%), Gaps = 39/291 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +RL S+N++ +        W  S          L    K L+AD+V  QEM S+   +
Sbjct: 38  GALRLASYNVHYIVLGRAEGAW--SRGDWERRKGPLNAAFKALEADLVGFQEMESFLRGS 95

Query: 82  KVFPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQ------SYPLLGA 133
                       +        H     +      I  R   +  L++        P +  
Sbjct: 96  DGSVNLARDWLLAQNPGFAATHHGDWRDTPQTQPIFYRADRLEALEEGWFFFADTPDVIY 155

Query: 134 KDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +F+ +    A        + G+   V+++H +              S S     A  +
Sbjct: 156 APTFNGSFPAFASWARFRDRVTGRVFRVVNVHFEF------------RSISNRRLSAALV 203

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            D       +    V+ GD N ++    +       ++       F     +  + N+ L
Sbjct: 204 ADRFAPALAAGERVVLLGDINARLGSATHG-----ILEDAG--WTFLPVAGATYHFNRGL 256

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID+          +               +  G+  +DH P+  D 
Sbjct: 257 NLFGAIDHI----ALAGPMDAAGPPV----VLRTRFPGEWPTDHYPVVADI 299


>gi|325285209|ref|YP_004260999.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489]
 gi|324320663|gb|ADY28128.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489]
          Length = 254

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 86/303 (28%), Gaps = 75/303 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           +VSWN+N +        +++                K ++ DI+ +QE  + +       
Sbjct: 3   IVSWNVNGVRAVVKKEFFES---------------VKYMNPDILCIQETKAQD------- 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            N      S     + +   +N   ++  A       +  ++   + A D+  R      
Sbjct: 41  -NEVAKALSPLENFSLASNSANKKGYSGTATLSSTKPLTIKADIGIEAHDTEGR------ 93

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++    +  +++++++ +                      + L+           P 
Sbjct: 94  ---VLCTEYENFYLVNVYVPNSGQKLDRLEYRKQWDKDFLDYLKNLEK--------KKPV 142

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNANKN 250
           +  GDFN     +   +D                       D  +   +           
Sbjct: 143 IACGDFNVAHKAIDLKNDKSNYNKTAGYTQTEIDGMNNFIADGFVDSFRMLHPDEVVYTF 202

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           IDYF++ Q+    + + +                  SDHCPI + 
Sbjct: 203 WSYRFKSRERNTGWRIDYFLVSQSIKDKVKEVTV-----------FSDIMGSDHCPIGLK 251

Query: 302 YDF 304
            DF
Sbjct: 252 IDF 254


>gi|291513563|emb|CBK62773.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 406

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 86/303 (28%), Gaps = 41/303 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAV 80
            V + ++N+           W             +    +    D DI+ +QE       
Sbjct: 121 TVSVETYNLLGADITTKGPSWAERKS-------HVGDIIRQSGNDPDILGVQECSIAAQK 173

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A +         YS       S               ++ V +L   YP    K  +   
Sbjct: 174 ADMKAMLGDLYDYSENEKPTSSPGLIFWKKGAFELEEREIVDLLNGKYPNTYEKQRYGHF 233

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V L    +G  I V  +HL++   + + +       +L    A+       +  E
Sbjct: 234 -----VRLKHLASGSSILVYSVHLRAGSDVATADLRKEMIDNLCPLAAR-------KSAE 281

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKEKDSRCNANKNLRNKI---- 255
           +  P ++ GD N   N L        +    +  L  F + +           +      
Sbjct: 282 TGCPVIVLGDMNCTPNRLIGGIPSSPQVYKSHGFLDTFTQTRQRTNENYATYSSSAAVVE 341

Query: 256 ------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISID 301
                        IDY      +         + + + ED   ++ +    SDH P+  +
Sbjct: 342 ECRVEVGENGSRRIDYIFTYPESRV-TTTRYATVLNFAEDGTANKLRSPLPSDHHPVRAE 400

Query: 302 YDF 304
            +F
Sbjct: 401 LNF 403


>gi|257068283|ref|YP_003154538.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810]
 gi|256559101|gb|ACU84948.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810]
          Length = 316

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 64/229 (27%), Gaps = 36/229 (15%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------GS 76
           R+ ++NI      +              D   L      LDAD++ LQE+          
Sbjct: 5   RVATFNIRHGLGPD-----------ERVDLPRLAGQIAALDADVIGLQEVDVRFGDRSDH 53

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +  A++       + +     +      +    +  +A+  ++  + QQ + L      
Sbjct: 54  ADQAARLGELLGMQVRFGAALDLPPEAPGAPRRQY-GLALLTRHEILTQQMHLLPDHPAG 112

Query: 137 FSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 R  +   +    G+++ VL  HL               +    + Q Q +    
Sbjct: 113 PPSREPRGVLHARLRHRGGEELDVLVTHL------------DDAAREHRTAQVQGILRLA 160

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            Q      P V+ GD N   +                  +     +   
Sbjct: 161 EQIPG---PAVLLGDMNADPSAPELAALSATGWRDAAQHVGLDAAQHVG 206


>gi|269123760|ref|YP_003306337.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis
           DSM 12112]
 gi|268315086|gb|ACZ01460.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis
           DSM 12112]
          Length = 277

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 47/309 (15%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M R  +  L F +       A+ + + S+N   L E                D+  L + 
Sbjct: 1   MRR--IFKLFFLIFLSMNIWAEPILIASFNTLKLGEN-------------KKDWKSLAKI 45

Query: 61  AKNLDADIVFLQEMGSYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                 DI+ +QE+ +   +  +      F    W    S   +            H  +
Sbjct: 46  VSKF--DIIAMQEVMNEKGINNLRNEVEKFTNEKWGYIISDMAVGTKDY-----KEHYGV 98

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
             R+K V  ++    +   KD  S+   R    +L+  N     ++  H          E
Sbjct: 99  LFRRKKVDSIKS---MGIYKDGKSKDFIRDPFGVLIRSNNFDFVLISAHSIFGKNKVERE 155

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
              S    +               K      ++ GDFN   N        +K      ++
Sbjct: 156 IEASRYHKVYKYFMD---------KSKEEDVILLGDFNLPANSK-----AFKYFKDTYNV 201

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                   ++     +       D    ++N  K      +    Y +D+ +   K +SD
Sbjct: 202 KEVFNSIKNKT-TMSSKGLANSYDNAFFNRNNLKEYTGR-YGVYDYTKDNHEQIRKYISD 259

Query: 295 HCPISIDYD 303
           H  I ++++
Sbjct: 260 HLIIFMEFE 268


>gi|254780995|ref|YP_003065408.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040672|gb|ACT57468.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 125

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 90/121 (74%), Gaps = 2/121 (1%)

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           LSQQ +WLK W  QK ++ +PFVIAGDFNRKIN +G+ DDFW+ +DP+  LIRFP+EK+S
Sbjct: 2   LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            CN     RNK  +DYFV+D++   FLI  SFS + Y++ D+ +R  +LS HCP++I+YD
Sbjct: 62  TCN--VIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119

Query: 304 F 304
           F
Sbjct: 120 F 120


>gi|327462087|gb|EGF08416.1| exodeoxyribonuclease [Streptococcus sanguinis SK1057]
          Length = 322

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 87/325 (26%), Gaps = 56/325 (17%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           K  L  V             ++L+SWNI++L+        +  +         + Q  + 
Sbjct: 28  KSALNFVIINSVNFTRKGNFMKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQA 81

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            +ADI+ +QE                   +        S ++     +       K    
Sbjct: 82  ENADIIAIQETKLSATGPTKKHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELT 141

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              ++P +GA  +    G      + +E +G   +V  ++  +        +      + 
Sbjct: 142 PTVTFPEIGAPSTMDVEGR----IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAK 195

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTI 228
            ++    L        +   P +  GD+N               R   +       +  +
Sbjct: 196 YAEYLATL--------DGQKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNL 247

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEI 278
                   F        +       +            IDY++        + +    + 
Sbjct: 248 LAKGFTDTFRHLHGDIPDQYTWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDS 307

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
              +           DH PI ++ +
Sbjct: 308 GARQ-----------DHTPIVMEIE 321


>gi|320162722|gb|EFW39621.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 517

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/325 (10%), Positives = 85/325 (26%), Gaps = 71/325 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+NI    E                    + +  +   AD + LQE+      +  
Sbjct: 214 IRVASFNIRNFVEP------------WEIRKAAIARQLRATHADFIGLQELRVLPDQSMG 261

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +    +          + +  + +I   + +  K+     +S  +       S    R
Sbjct: 262 QLEQLAQLLPEYRFTHFQAAQTLSGEIIEGLGILSKHPLEHIESLAINPHPQLSSDTNAR 321

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKES 201
             + + ++I    ++ V   HL                     +Q   +  W+    + +
Sbjct: 322 VCLRVDLDIPKLGRVEVFVAHLSF-------------DAGEQCRQIAQVSHWMESTWQST 368

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---------- 251
               ++ GDFN   ++  + D            +  P    +   + +            
Sbjct: 369 RASQILLGDFNVYFDFEWSIDPLTARSRDAKDFLASPLNPCAAAYSQQFPFHLPEHSFID 428

Query: 252 --------------------RNKI----------PIDYFVMDQNAYKFLIQESFSEILYN 281
                                               D  ++  +         F  + ++
Sbjct: 429 AWLSFVAQLDRRESRDNPGITYPAMHNIATADSCRPDRILLRSDTLHVHHARRFGFLPFD 488

Query: 282 EDDI----KSRGKRLSDHCPISIDY 302
           +D         G   SDH  + +D+
Sbjct: 489 DDGTELPPGRSGFFASDHLGVLVDF 513


>gi|167523032|ref|XP_001745853.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775654|gb|EDQ89277.1| predicted protein [Monosiga brevicollis MX1]
          Length = 513

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/339 (12%), Positives = 99/339 (29%), Gaps = 53/339 (15%)

Query: 11  FFLVPCTASVAQKV---RLVS--WNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           +           ++    + S  +NI     + ++      +           + +    
Sbjct: 174 WIFPATMPQDMGELPKDTVTSFCYNILCEKYATRQVYRYCPSWALEWNYRKQQILKDILQ 233

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNV 121
             +DI+ LQE+ S    +    K     +       +  +  S+ D  T    A+     
Sbjct: 234 YSSDIICLQEVASGQFYSYFQHKLRERDYQGLYHPKSRVRTMSDADRQTVDGCAIFFHVS 293

Query: 122 RVLQQSYPLLGAKDSFSRAGN-------------RRAVELLVE--INGKKIWVLDIHLKS 166
           +        +  + S +R  +               A+  L+E    G+K +V ++HL  
Sbjct: 294 KFKLVKEHCIEFERSATRYASGCADMLNRVMIKDNIALCALLERQSTGEKFFVCNLHLTW 353

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------ 220
                 ++   +          + +++++ +     +P +I GDFN   +          
Sbjct: 354 DPKFRDVKVIQTVLA------LREIENFLKEHNCPNIPVMIMGDFNSMHDSGVYELMENG 407

Query: 221 ---------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
                             F +++  + +L       +    +N        IDY      
Sbjct: 408 KYCVQPLMGEDWGYDYSKFIESVGLHHNLKLRSAYGNELPYSNYTPTFVGIIDYIWYSAE 467

Query: 266 AYKFLIQESFSEILYNED--DIKSRGKRLSDHCPISIDY 302
                      E  Y ++  D        SDH  +S ++
Sbjct: 468 RLIPSALLGPVEEAYIQEHVDGCPNPHFASDHLALSAEF 506


>gi|322386046|ref|ZP_08059685.1| exodeoxyribonuclease [Streptococcus cristatus ATCC 51100]
 gi|321269890|gb|EFX52811.1| exodeoxyribonuclease [Streptococcus cristatus ATCC 51100]
          Length = 275

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + +  +  +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLRTLQAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPIVTFPEIGAP-STMDVEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +        +         ++    L        +   
Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLDERQVWDVKYAEYLASL--------DEQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|226467620|emb|CAX69686.1| APEX nuclease [Schistosoma japonicum]
          Length = 319

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 84/304 (27%), Gaps = 80/304 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82
           ++LVSWN+N +                        +Y K  +ADI  +QE     + +  
Sbjct: 65  LKLVSWNVNGIRAVIKNGGM---------------EYIKKENADIFCIQETKCPLHKIPS 109

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                ++  F+S+     ++            A+  K               D   R   
Sbjct: 110 EAKLPSYQSFWSSADKAGYA----------GTALFSKIAPKKVTYGIGRKVHDEEGR--- 156

Query: 143 RRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 ++     + +++  ++ +    L  L            +  + L        ++
Sbjct: 157 ------VITAEFDRFYLVTAYVPNAGQGLARLPYREKEWDPDFLEYLRKL--------DA 202

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
             P ++ GD N     +                     F K +   + +  +      R 
Sbjct: 203 TKPVIVCGDLNVAHEEIDLARPDTNHKTAGFTDQERSGFTKLLSSANLIDTYRHFYPDRR 262

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            A      +           +DYF++ Q     +  +               G   SDHC
Sbjct: 263 EAYSFWSYRTGARLINNGWRLDYFLVSQRILANVGDQEIR-----------CGVTGSDHC 311

Query: 297 PISI 300
           P+ +
Sbjct: 312 PVVL 315


>gi|113866254|ref|YP_724743.1| exodeoxyribonuclease III [Ralstonia eutropha H16]
 gi|113525030|emb|CAJ91375.1| Exodeoxyribonuclease III [Ralstonia eutropha H16]
          Length = 258

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 88/307 (28%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           +R++S N+N +        +                +    DAD+V +QE+ +  A    
Sbjct: 2   LRIISANLNGIRSASKKGFF---------------DWMGKQDADMVCVQELKAQEADMTE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + +  F+       +S           +  R K  RV+       G  +S   + 
Sbjct: 47  AFLAPHGYHGFFHYAEKKGYSG--------VGLYTRHKPERVV------TGFGNSEFDSE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE+    + V+ +++ S    +  +                LK        S
Sbjct: 93  GRY-----VEVQYPHLAVISVYVPSGSSGEERQLAKFRFMEAFLPHLLQLKA-------S 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246
               V+ GD N     +   +                    +      +   ++ D R  
Sbjct: 141 GREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWIGELFDVHGYVDVFRKLDPRPE 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             + ++ SDH P
Sbjct: 201 QYTWWSNRGQAYAKNVGWRIDYHLATPKIADTARLCSI-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           +SIDYD+
Sbjct: 250 LSIDYDY 256


>gi|126175498|ref|YP_001051647.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS155]
 gi|125998703|gb|ABN62778.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS155]
          Length = 403

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/371 (11%), Positives = 91/371 (24%), Gaps = 93/371 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +++ S N+    E            S  +       L ++  +   DIV  QE+ S   +
Sbjct: 30  IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGFQEVFSPEPL 89

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
            ++  +    + ++                  A+A R   V +         +     S 
Sbjct: 90  KRIASEQG-LVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSS 148

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176
             A +R+ +   VE+    K     +H KS     +LE                      
Sbjct: 149 EFAFSRKVLRATVEVPHIGKCDYYVVHFKSKRAGLALEPKLIEPKRFEHQPLALDNLAPA 208

Query: 177 ------------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNR---- 213
                                S      +A  L    + +++ S  P ++ GDFN     
Sbjct: 209 ASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQASKHPVIVMGDFNDSLTM 268

Query: 214 -----------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------------- 246
                       ++           +        F + +                     
Sbjct: 269 GALDALTIQGESLHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDSLTGYT 328

Query: 247 ---------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKR 291
                     +        +DY ++         +     + Y   D         R   
Sbjct: 329 AYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAY 388

Query: 292 LSDHCPISIDY 302
            +DH P+ ++ 
Sbjct: 389 STDHAPVIVEL 399


>gi|313682316|ref|YP_004060054.1| exodeoxyribonuclease iii [Sulfuricurvum kujiense DSM 16994]
 gi|313155176|gb|ADR33854.1| exodeoxyribonuclease III [Sulfuricurvum kujiense DSM 16994]
          Length = 258

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 87/306 (28%), Gaps = 75/306 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+ + ++SWN+N +        +                + +     IV LQE+    A+
Sbjct: 2   AESIEIISWNVNGIRAVAEKGGF---------------DWLEERQPHIVCLQEI---KAL 43

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           ++  P+N +   +S     N +   +    ++      K   +   +   +   +     
Sbjct: 44  SEQIPQNLFSHHFS-----NITVNSAEKKGYSGTLTASKLEPIYSDTRADIDIMNEGR-- 96

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   +VE +   I + +++  +    +                 + L+        
Sbjct: 97  --------IVEHHYGDIALFNVYFPNGQKDEERLAYKLEFYERFLDYCEALRR------- 141

Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                +I GD N                   +L    D+   +  +  +  F      + 
Sbjct: 142 EGKKIIICGDVNTAHRPIDLKNPKSNEKTSGFLPIERDWIDKLLSHGYIDTFRHVHGDKE 201

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           N       +           IDYF +  +  + L      + +             SDHC
Sbjct: 202 NEYSWWSYRFSARSKNVGWRIDYFFISDDLAESLEDAFILQEI-----------MGSDHC 250

Query: 297 PISIDY 302
           P+ I  
Sbjct: 251 PVGIRL 256


>gi|213405953|ref|XP_002173748.1| CCR4-Not complex subunit Ccr4 [Schizosaccharomyces japonicus
           yFS275]
 gi|212001795|gb|EEB07455.1| CCR4-Not complex subunit Ccr4 [Schizosaccharomyces japonicus
           yFS275]
          Length = 653

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/339 (11%), Positives = 81/339 (23%), Gaps = 60/339 (17%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++S+N+     +         +     +    L+ Q      ADI+ LQE+   N  +
Sbjct: 297 FTVMSYNVLCERYATPVMYGYTPSWALAWSYRKELIMQEIVGYSADIICLQEVDVENYDS 356

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----------AIAVRKKN-------VRV 123
              PK +   +       +  +  +  +                 +  K          +
Sbjct: 357 FFAPKMSLKGYKGVHYPKSRVRTMNEAERRVVDGCATFFKTSKFVMHDKILIEFNQAPSL 416

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            +Q   L     +     +  ++  ++E       ++  +          +        L
Sbjct: 417 RRQDIKLTPDMYNRVMTKDNISILTMLESKDTGTKLIVANCHIHWDPQFRDVKLMQVAML 476

Query: 184 LSQQAQWLKDWITQKKE-------------------SLVPFVIAGDFNRKINY------- 217
           + + AQ   D+     +                   S +P +I GDFN            
Sbjct: 477 MDELAQAASDFQRSPSKLPDDHFDGSTRKKPSYTHYSKIPVLICGDFNSVPGSGVLDFLS 536

Query: 218 -----LGNNDDFWKTIDPNDSLIRFPKEKDSRCN--------ANKNLRNKIPIDYFVMDQ 264
                  + D             R                   N        IDY     
Sbjct: 537 SGMVERKHEDFMEHDYGDYTVAGRSHTFSLKSAYSANNDLPFTNFTPGFSGTIDYVWYTN 596

Query: 265 N-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           N      + +       +           SDH  +  ++
Sbjct: 597 NSLEVTGLLKGVDPDYLSTVVGFPNPHFPSDHICLLAEF 635


>gi|260797709|ref|XP_002593844.1| hypothetical protein BRAFLDRAFT_75696 [Branchiostoma floridae]
 gi|229279074|gb|EEN49855.1| hypothetical protein BRAFLDRAFT_75696 [Branchiostoma floridae]
          Length = 403

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 87/294 (29%), Gaps = 48/294 (16%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +  V     L++WNIN L ++  +                +     +L  D+VFLQE+  
Sbjct: 118 SEPVTPGFTLLTWNINGLDQRNIL-----------ERTKAVCNTINSLYPDVVFLQEVIP 166

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                     + +    S                 TA+ +RK ++  + Q+         
Sbjct: 167 QTFEYIEAKCDRYKAIASGTEQ-----------YFTAMLLRKSSITFISQNIQPFPTT-- 213

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  + +        + ++  HL+S               +   +Q Q +   + 
Sbjct: 214 ---RMMRNLLIVKARFGSVPLCLMTSHLEST----------KDHAAERKRQLQQVLQTVM 260

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN------ 250
           Q+ +     ++ GD N +   +                   P +     + +KN      
Sbjct: 261 QQ-DQTNTVIVGGDLNLRDTEVAAVGGLPAGTVDFWEACGSPLQFKFTWDVSKNDNLDWQ 319

Query: 251 --LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              R K   D   +  +    L  ES        D ++   +  SDH  +   +
Sbjct: 320 LKFRPKCRFDRVYVRSSRPDQLAPESIK--FVGTDRLEGCRRFPSDHWGLLCKF 371


>gi|119953317|ref|YP_945526.1| exodeoxyribonuclease III [Borrelia turicatae 91E135]
 gi|119862088|gb|AAX17856.1| exodeoxyribonuclease III [Borrelia turicatae 91E135]
          Length = 252

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 78/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           + L+SWN+N +    G                   ++ +  + D++ LQE          
Sbjct: 1   MNLISWNVNGIRAIFGKGF---------------LEFIEKYNPDVLCLQETKAFKEQLPK 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  ++S   +  +S     +                 +   L           
Sbjct: 46  ELINIEGYYSYFSKSIIKGYSGVGLYSK---------------VKPIKLENMNMEIFDRE 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +      + +   +++ +  +         +         +    L+        S
Sbjct: 91  GRCLIA-----HYRDFILINAYFPN-------SQSLRKRLPYKLEFLMSLESIANMFVTS 138

Query: 202 LVPFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
               VI GDFN     +                 +  W     N   +   +  +     
Sbjct: 139 GKNIVICGDFNIAHTEIDLANPKTSRESAGFYIEETTWMDNFLNGGYVDTFRMFNMDPGN 198

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 K           IDYF++++     +        +             SDHCP+
Sbjct: 199 YTWWDYKTRARERNIGWRIDYFIVNEFFKSKVKDALILREV-----------MGSDHCPV 247

Query: 299 SIDY 302
            ++ 
Sbjct: 248 FLEL 251


>gi|58040181|ref|YP_192145.1| exodeoxyribonuclease III [Gluconobacter oxydans 621H]
 gi|58002595|gb|AAW61489.1| Exodeoxyribonuclease III [Gluconobacter oxydans 621H]
          Length = 275

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/308 (10%), Positives = 79/308 (25%), Gaps = 74/308 (24%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGS 76
                     SWNIN                   +    ++ + +   + D++ LQE+  
Sbjct: 17  PMSPTPFTFASWNIN----------------SIRARAHHVQDWLERHPECDLLCLQEIKC 60

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            ++            F +           S    +  +A+  +    +           +
Sbjct: 61  EDS-----------QFPAVFAEAGLDVAISGQKAYNGVALIGRRPFTVTH--------HT 101

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                +  A  +  E++G  I + +++L +             +          L     
Sbjct: 102 LPAFDHPSARYIEAELDG--ITIGNLYLPNGNSGGEDGYATKLAF------FDALAARAR 153

Query: 197 QKKESLVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEK 241
              ++  PF   GDFN                           ++ ++           +
Sbjct: 154 VLLDAEKPFAFIGDFNVCPTDEDLAPGALSTDDALVRPETRAAFRRLEWMGLTDALRALQ 213

Query: 242 DSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            +  +                  ID+ ++     + L         +  D  +   ++ S
Sbjct: 214 PTGRHYTFWDYQAAAFQRNSGLRIDHALLSPRLTERLKS-------FVIDRDERAKEKAS 266

Query: 294 DHCPISID 301
           DH P+ + 
Sbjct: 267 DHVPVLVT 274


>gi|50950149|ref|NP_001002946.1| deoxyribonuclease-1 precursor [Canis lupus familiaris]
 gi|62510684|sp|Q767J3|DNAS1_CANFA RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I; Flags: Precursor
 gi|60729694|pir||JC8053 deoxyribonuclease I (EC 3.1.21.1), pancreatic type - dog
 gi|40313536|dbj|BAD06000.1| deoxyribonuclease I [Canis lupus familiaris]
          Length = 284

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 86/283 (30%), Gaps = 30/283 (10%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAK 82
           R+ ++NI T  E               +    + Q       D+  +QE+   +  AV K
Sbjct: 24  RMAAFNIRTFGET---------KMSNATLSKYIVQILSRY--DVAVVQEVRDSHLTAVGK 72

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +          +   +++     S+         R   V VL       G +   +   +
Sbjct: 73  LLDTLNQDDPNAYHYVVSEPLGRSSYKERYLFLFRPDRVSVLDSYQYDDGCEPCGNDTFS 132

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +       ++    +       LD++    +     L  Q +W           L
Sbjct: 133 REPAIVRFHSPLTEVKEFAVVPLHAAPLDAVAEIDALYDVYLDVQHKW----------DL 182

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              V+ GDFN   +Y+  +      +  N +      +     + + +       D  V+
Sbjct: 183 EDIVLMGDFNAGCSYVAASQWSSIRLRTNPAFQWLIPDTADTTSTSTHCAY----DRIVV 238

Query: 263 -DQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
                   ++ ES +   +      S    + +SDH P+ +  
Sbjct: 239 AGSQLQHAVVPESAAPFNFQVAYGLSSQLAQAISDHYPVEVTL 281


>gi|291515593|emb|CBK64803.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 291

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 79/283 (27%), Gaps = 50/283 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              VRL ++N +          W  +     ++Y    +    +D D++ LQE+      
Sbjct: 56  PNSVRLATYNTH------RCEGWTQNSGTDRANYNNTAKVISLMDPDVIALQELDKNTTW 109

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +        +   T     + K  S       I +  K       +  L G        
Sbjct: 110 HQ--TDQLQELADRTGMRPYYCKTISYRGGDYGIGILCKTAPKNTYAGDLPGT------- 160

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R+      +        +  H                S     +  + + ++I     
Sbjct: 161 EARKFFLAEFD----GYIFIATHFCH------------QSDENRQRSFEIITEYIAANYA 204

Query: 201 S-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +   P  +AGD N                    + +   K   +  N   N  +   IDY
Sbjct: 205 AYTKPIYLAGDLNTS--------------KLPAAALESWKIISTSANTFVNTSSPSRIDY 250

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++             +   Y E ++ +    +SDH P+ +D 
Sbjct: 251 VLVYTGNSPSYEVLRTAVPSYEEINVMT----VSDHLPVLVDL 289


>gi|284025052|ref|ZP_06379450.1| phospholipase C [Staphylococcus aureus subsp. aureus 132]
          Length = 236

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 65/216 (30%), Gaps = 18/216 (8%)

Query: 97  RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                    S       +A+  K     +  +        F    N+  V   +E NGK 
Sbjct: 19  WDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKN 77

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKI 215
           + V+  H +S    DS          + ++Q + + D++ +          I GD N   
Sbjct: 78  VHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN- 132

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK-- 268
                  D  K ++ ND L                  N        +DY   D++  +  
Sbjct: 133 KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPK 192

Query: 269 FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
            L+ E  +E     D        +    SDH PI  
Sbjct: 193 QLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 228


>gi|193211783|ref|YP_001997736.1| exodeoxyribonuclease III [Chlorobaculum parvum NCIB 8327]
 gi|193085260|gb|ACF10536.1| exodeoxyribonuclease III [Chlorobaculum parvum NCIB 8327]
          Length = 253

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 78/305 (25%), Gaps = 76/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                   +    L  +  +   D V L+E+    A  + 
Sbjct: 1   MNIYTWNING----------------IRARQEALAAWLDSRKPDFVVLEEV---KAREEE 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+         +     S +   +     + VR++++  +    P    ++        
Sbjct: 42  IPETITDFAGYRKFWNGSSFKKGYSG--VGLLVREESLGDVSCEVPPFDVENR------- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + ++  +  ++  ++      +                   LK++I        
Sbjct: 93  -----TLVLHAPQFTLIGTYVPRGNGAEHYAVKLR--------YLADLKEYIASLIAEGQ 139

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++AGD N  +                         +            +    + +  
Sbjct: 140 EVILAGDMNVALTEIDVHRSQNKPGATGLRPEERSAIEAHLELGLHDIVRELNPDKKDLF 199

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N            ID   +       +   S               ++ SDH P+S
Sbjct: 200 TWWPNWKFARERNLGWRIDCIYLSPALAGKVSGVSV-----------DLDEKSSDHAPVS 248

Query: 300 IDYDF 304
           ++  F
Sbjct: 249 VELAF 253


>gi|262373770|ref|ZP_06067048.1| exodeoxyribonuclease III [Acinetobacter junii SH205]
 gi|262311523|gb|EEY92609.1| exodeoxyribonuclease III [Acinetobacter junii SH205]
          Length = 280

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+VS N+N L                      L ++ +  DAD+V +QE   ++     
Sbjct: 20  LRVVSINVNGLRSSVTKG---------------LLEWLEQSDADVVCMQESRITHEQWTD 64

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F    W           ++            A+  +   +  ++       DS  R   
Sbjct: 65  KFKPEGWYTHLFPAERAGYA----------GTAIYSRLPFITVKNGLGFELADSQGRF-- 112

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +    ++     + +  ++L S    +        + +            + Q ++ 
Sbjct: 113 ---ITAEFDLGLSHPVHIASLYLPSGSSGED-------AQARKDLFLLEYAKILKQWRDE 162

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N     +   +                +   I  +   +   +E      
Sbjct: 163 NKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDDLGYVDTFREVRQEAE 222

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY     +                      + +  SDH P
Sbjct: 223 LYSWWSNRGQARAKNVGWRIDYQACSPDWKARTTNAWV-----------YKEQWFSDHAP 271

Query: 298 ISIDY 302
           + IDY
Sbjct: 272 VIIDY 276


>gi|300780401|ref|ZP_07090257.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC
           33030]
 gi|300534511|gb|EFK55570.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC
           33030]
          Length = 260

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 73/291 (25%), Gaps = 52/291 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   +       + +  D D++ +QE    +     
Sbjct: 1   MRVATWNIN----------------SVRTRIDRAVAFLERNDVDVLAMQETKCSDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL--LGAKDSFSRAG 141
                    YS      +            +A+  +      +       G         
Sbjct: 41  ------KFPYSAFEAAGYDVAHVGYHQWNGVAIISRVGLENVRDGFDGQPGFNKEPDAPQ 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R A  +     G  + V  +++ +   +      Y                 + ++ + 
Sbjct: 95  DREARAVAATCGG--VEVWSLYVPNGREIGDRHYDYKLEFLWR----------LAEQIDP 142

Query: 202 LVPFVIAGDFNRKINYLGNNDDFW-------KTIDPNDSLIRFPKEKDSRCNA--NKNLR 252
             P V  GD+N         D  +          +            +   +        
Sbjct: 143 STPQVFCGDYNIAPTDKDVWDRAFFEGKTHVTEPERAAFEALLEAGLNQATHPEPYSYWD 202

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            K     F   +               +  D  +  GK  SDH P+ +DYD
Sbjct: 203 YKGM--RFQKGEGMLIDFQLSGLEGAGF-VDTHEREGKGTSDHAPVVVDYD 250


>gi|88601744|ref|YP_501922.1| exodeoxyribonuclease III (xth) [Methanospirillum hungatei JF-1]
 gi|88187206|gb|ABD40203.1| exodeoxyribonuclease III (xth) [Methanospirillum hungatei JF-1]
          Length = 264

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 78/308 (25%), Gaps = 71/308 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79
           +   L SWN+N L       +    +               + + DI+ +QE    +++ 
Sbjct: 2   KTYTLYSWNVNGLRAISSKEVLPGVLFPGLP---------AHENIDILCIQETKADAHSL 52

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +     +  + +      +          + +A+  +      +   L    DS  R
Sbjct: 53  KPDITRIPDYFFYINPAERKGY----------SGVAMYSRTEPESIELGGLSPEFDSEGR 102

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                     +     +  +++++  +    D        +  L         + I    
Sbjct: 103 I---------ITARFPEFVLMNVYFPNGGASDE-----RLAFKLRFY--DAFLEKIKTMD 146

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRC 245
            +    +  GD N     +         +                        +      
Sbjct: 147 AAGERIIFCGDVNTAHKPIDLARPKENELVSGFLPIEREWIDRVIAAGFYDSFRLFSDEG 206

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           N       K           IDYF ++  A  F+                      SDHC
Sbjct: 207 NQYSWWDYKSRARTRNVGWRIDYFFVNTAAKPFITGAGIR-----------NDIMGSDHC 255

Query: 297 PISIDYDF 304
           P+++  +F
Sbjct: 256 PVTLTLEF 263


>gi|296876863|ref|ZP_06900911.1| exodeoxyribonuclease III [Streptococcus parasanguinis ATCC 15912]
 gi|296432365|gb|EFH18164.1| exodeoxyribonuclease III [Streptococcus parasanguinis ATCC 15912]
          Length = 282

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 77/307 (25%), Gaps = 56/307 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++L+SWNI++L+        +  +         + Q     DADI+ +QE       
Sbjct: 5   GNTMKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAEDADIIAIQETKLSAKG 58

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                       +        S ++     +       K       ++P +GA  S    
Sbjct: 59  PTKKHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPVVTFPEIGAP-STMDL 117

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R      + +     +V  ++  +                  ++    L        +
Sbjct: 118 EGRI-----ITLEFDHFFVTQVYTPNAGDGLKRLEERQVWDVKYAKYLAEL--------D 164

Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              P +  GD+N               R   +     + +  +        F        
Sbjct: 165 KQKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHLHGDVP 224

Query: 246 NANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            IDY++        + +    +    +           DH
Sbjct: 225 ERYTWWAQRSKTSKINNTGWRIDYWLTSNRVTDKITKSDMIDSGARQ-----------DH 273

Query: 296 CPISIDY 302
            PI ++ 
Sbjct: 274 TPIVLEI 280


>gi|288929660|ref|ZP_06423504.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329165|gb|EFC67752.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 317 str. F0108]
          Length = 249

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 79/300 (26%), Gaps = 77/300 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L    G                      K LDAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAVVGKDFE---------------NTFKALDADFFCLQETK-MQAGQLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  F++           ++   ++  A+  ++  +       +   D   R    
Sbjct: 45  LQFDGYDSFWN----------YADKKGYSGTAIYTRHKPLNVSYGIGIDQHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +                   Q     + ++    +   
Sbjct: 91  -----VITLEMPTFFLVTVYTPN-------SQEELRRLDYRMQWEDDFQAYL-HNLDKCK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P ++ GD N     +   +      +               +       + K        
Sbjct: 138 PVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQKMTQLLDAGFTDTFRWKYPEEVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF++       ++       +             SDHCP+ +
Sbjct: 198 WWSYRFKARERNTGWRIDYFLVSNRLQAEVLDAKIHTDIL-----------GSDHCPVEL 246


>gi|212692207|ref|ZP_03300335.1| hypothetical protein BACDOR_01703 [Bacteroides dorei DSM 17855]
 gi|237711516|ref|ZP_04541997.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237726027|ref|ZP_04556508.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265752941|ref|ZP_06088510.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212665084|gb|EEB25656.1| hypothetical protein BACDOR_01703 [Bacteroides dorei DSM 17855]
 gi|229435835|gb|EEO45912.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229454211|gb|EEO59932.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263236127|gb|EEZ21622.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 359

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/336 (12%), Positives = 88/336 (26%), Gaps = 85/336 (25%)

Query: 3   RKYVLALVFFLVPCTASV---------------AQKVRLVSWNINTLSEQEGVSLWKNSV 47
           RKY L L F  + C+                     ++ +S+N     +    +    + 
Sbjct: 66  RKYAL-LSFLGLVCSIGAIRTYFPVNVFVSDVPEGAIKFLSYNTMAFEKNRANTKDNPNP 124

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                    + +Y +N +ADI+ LQE         +                   K    
Sbjct: 125 ---------VLEYLRNSNADIICLQE--------YIVGGRLTKKEVDYALRDYPYKNYYK 167

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 +    +   +           +         ++   +++NG  + V++ HL+S 
Sbjct: 168 ISGANGLGCYSRFPILSAHPVRYASLNN--------GSIAYKIKVNGDTLLVVNNHLESN 219

Query: 168 CFLDSLENTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVP 204
              +  +  Y                         + ++ + QA  +   +   K     
Sbjct: 220 KLTEKDKEVYREMMKDPDKQKVSQGSRLLIRKLAEASAIRAVQADSIARLVAGYKGGG-- 277

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GDFN        +    + ++                N          ID  ++ +
Sbjct: 278 IIVCGDFNDSPISYT-HRVVGEGLNDAFVESGNGFGISYNQNHFYF-----RIDNILLSK 331

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           N   +                     + SDH PI  
Sbjct: 332 NLKSYRCTV-------------DNTIKSSDHYPIWC 354


>gi|302824275|ref|XP_002993782.1| hypothetical protein SELMODRAFT_137611 [Selaginella moellendorffii]
 gi|300138378|gb|EFJ05148.1| hypothetical protein SELMODRAFT_137611 [Selaginella moellendorffii]
          Length = 351

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 93/342 (27%), Gaps = 89/342 (26%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------ 74
           A   R +SWN N+L            + R  ++   +  + +  D D++ +QE+      
Sbjct: 30  ADPSRFMSWNANSL------------LLRFKNNREEVMSFIRGFDPDVICIQEVRLPAAG 77

Query: 75  -----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKKNV 121
                         +A A+   +    +   +             + +  TA+ V+    
Sbjct: 78  FKGEKKNPGEIKDDSAAARNDKQAVMRVLSVSPMADYSVWWSLGENKYAGTALFVKNCFK 137

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            V          KD+     + R +            +L+ +  +     +         
Sbjct: 138 PVSVAFNIDNKGKDAQRHEIDGRIILAEF----GSFTLLNTYAPN-----NGWKEEENGF 188

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------------------- 219
                  + + ++++   +   P +  GD N     +                       
Sbjct: 189 VRRRAWDKKVLEFVSSCSK---PLIWCGDLNVSHQEIDVTHPEFFANATQPGYTPPNKED 245

Query: 220 ---------NNDDFWKTIDPNDSLIRFPK----------EKDSRCNANKNLRNKIPIDYF 260
                        F   ++  + +  +               S     K    ++ IDYF
Sbjct: 246 AGQPGFTLNERARFSTILNRGNLVDTYRHLHEKQDLEAGFTWSGNPVGKYRGKRMRIDYF 305

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++ +     L            +     G   SDHCP++++ 
Sbjct: 306 LISKALLPRLASSKIHGRGIELE-----GFLGSDHCPLTMEL 342


>gi|156037768|ref|XP_001586611.1| hypothetical protein SS1G_12598 [Sclerotinia sclerotiorum 1980]
 gi|154698006|gb|EDN97744.1| hypothetical protein SS1G_12598 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 632

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/366 (10%), Positives = 88/366 (24%), Gaps = 77/366 (21%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
              A   ++  + S+NI  +            +           + +  +  D+D V LQ
Sbjct: 240 TTVAPDVERFTVFSYNILCDNYVGPGQYGYVPSKALDWEHRRHEILREIEERDSDFVCLQ 299

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSY 128
           E+ + N       K  +  +       + +K  S +        A   +     +L +  
Sbjct: 300 EVDAENFREFFSVKLAYKDYKGVWWPKSRAKTMSESAAKAVDGCATFYKNNKYILLDKQL 359

Query: 129 PLL-----------GAKDSFSRAGNRRAVEL----LVEINGKKIWVLDIHLKSFCF-LDS 172
                            D F+R   R  + +       + G ++ V + H+       D 
Sbjct: 360 IDFANIAINRPDMKNQHDIFNRVMPRDHIAVLGFFENRLTGSRVIVANAHIFWDPAYADV 419

Query: 173 LENTYSPSCSLLSQQAQWLKDW------------------------------ITQKKESL 202
                +     +S+ A+  + +                              +    ++ 
Sbjct: 420 KLIQIAILMESISKFAEKYQRFPPCKDKKAYTITDDSNSDAPVEVAPEPAPSMEYTNKTQ 479

Query: 203 VPFVIAGDFNRKINYLGN------------------------NDDFWKTIDPNDSLIRFP 238
           +P ++ GD N   +                             D          +     
Sbjct: 480 IPLIVCGDLNSTADSSVYELLATGRVAPDHPDLGNYQYGNFTRDGIEHPFSLRSAYTNLA 539

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCP 297
                    N        ID+     NA +        +  Y             SDH  
Sbjct: 540 DGPQELTWTNYTPGFTDHIDHIWYSTNALENTDLLGPVDEEYMRTVPGLPHYHFPSDHLA 599

Query: 298 ISIDYD 303
           +   ++
Sbjct: 600 LLARFN 605


>gi|11498188|ref|NP_069414.1| exodeoxyribonuclease III (xthA) [Archaeoglobus fulgidus DSM 4304]
 gi|2650040|gb|AAB90657.1| exodeoxyribonuclease III (xthA) [Archaeoglobus fulgidus DSM 4304]
          Length = 257

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 78/306 (25%), Gaps = 77/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                   S   ++  + K    DI+ +QE    N     
Sbjct: 2   LKIATFNVN----------------SIRSRLHIVIPWLKENKPDILCMQETKVENR---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    I +    S +     +A+                 KD        
Sbjct: 42  ------KFPEADFHRIGYHVVFSGSKGRNGVAIASLEEPEDVSFGLDSEPKDEDR----- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                L+      I V++ ++     +DS +  Y        Q  + L  ++ +  +   
Sbjct: 91  -----LIRAKIAGIDVINTYVPQGFKIDSEKYQYK------LQWLERLYHYLQKTVDFRS 139

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V  GD N                    +      + K ++     +   ++       
Sbjct: 140 FAVWCGDMNVAPEPIDVHSPDKLKNHVCFHEDARRAYKKILELG--FVDVLRKIHPNERI 197

Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D  +      +  +           D      ++ SDH P
Sbjct: 198 YTFYDYRVKGAIERGLGWRVDAILATPPLAERCVDCYA-------DIKPRLAEKPSDHLP 250

Query: 298 ISIDYD 303
           +   +D
Sbjct: 251 LVAVFD 256


>gi|317505035|ref|ZP_07962983.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           salivae DSM 15606]
 gi|315663917|gb|EFV03636.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           salivae DSM 15606]
          Length = 362

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/352 (9%), Positives = 87/352 (24%), Gaps = 64/352 (18%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------S 46
           M R+ +L  + F+   + +  +K  +     +N   L +    +   +            
Sbjct: 16  MKRQLILLAMLFVCIASIAQ-KKFSVYAIGFYNQENLFDTCHDAGKYDQDFLPTGSYHWD 74

Query: 47  VKRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             + +     + +   ++  D+        + L E+     +  +  +       +    
Sbjct: 75  GLKYSHKLHNMARALADMGTDVLPNVGCAVIGLSEVEHNKVLTDLTAQPELK---ARNYQ 131

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +      I  A+        +  Q   P   + +  +    R  + +   +  + +
Sbjct: 132 FCHIEGPDKRGIDCALIYNPSLFNLETQRLVPYRNSAEQDTSFATRGFLTITGTLANEPV 191

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
             +  HL S     S     +     +      L   I           + GD N     
Sbjct: 192 AFVVCHLPSRYNGSSYREWGASQIKAVKDSLLALNPQIK--------VFVMGDMNDDPTD 243

Query: 218 LGNNDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
              +               +     +   K           +    D  +M  N      
Sbjct: 244 KSMHSTLSAKESVEKVEANDMYNPWYNILKKQGKGTLMYRGSWNLFDQIIMTPNLINKKG 303

Query: 272 QESFSEILY-----------------------NEDDIKSRGKRLSDHCPISI 300
           + +++ + +                             +     SDH P+ +
Sbjct: 304 ERNYTTLKFWKNQIQRMPYLFQQEGQYKGSPKRTSAGGAWLDGFSDHLPVCV 355


>gi|297198294|ref|ZP_06915691.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
 gi|297147051|gb|EFH28465.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
          Length = 377

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 73/293 (24%), Gaps = 55/293 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++R+++WN+                 +         +     D D+V LQE    +A 
Sbjct: 122 PHRLRVMTWNLWFGGT------------KVHDHRAKQLKVITETDVDVVGLQETYG-SAA 168

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++     W    +                 T + +  +         P +G        
Sbjct: 169 EELAEALGWHHHRAG----------------TNLGIISRFPITAVLGDPDVGFY------ 206

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               A    + +  +++ V   HL    +     +       +   Q +     I     
Sbjct: 207 ---GAAGARIAVEEREVEVWTAHLDYERYGP-YASEPLAHEEVRLAQMRDTLHRI----G 258

Query: 201 SLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIRFPKEKDSRCNANK----N 250
              P V+ GDFN   +    +          +    +      P       +       +
Sbjct: 259 DSAPVVLVGDFNCPSHLDWPDVEWPVTKAAEEAGFGDSFRQARPDAVRDPGHTWSPVHAH 318

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +  ID+ +      + L   +                  SDH  +   + 
Sbjct: 319 PEPQDRIDFVLHRG--LRVLDSRTCVSDTPRTWPDVEDNDWPSDHAAVITTFS 369


>gi|196011674|ref|XP_002115700.1| hypothetical protein TRIADDRAFT_30062 [Trichoplax adhaerens]
 gi|190581476|gb|EDV21552.1| hypothetical protein TRIADDRAFT_30062 [Trichoplax adhaerens]
          Length = 538

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 95/337 (28%), Gaps = 57/337 (16%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+     + +       +           + +   + +AD++ LQE+ +     
Sbjct: 198 FTVMCYNVLCEKYATRSSYGYCPSWALAWDYRRQNIMKEILHYNADVICLQEVATDQFYT 257

Query: 82  KVFPKNTWCIFYSTERLINHSKRDS----NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            + P+     +       + ++       +     AI  R     ++++           
Sbjct: 258 YLLPELKLHGYDGIFGAKSRARTMVEPERSAVDGCAIFFRLNKFTLVKEDLIEFNHLAMM 317

Query: 138 SRAGN-----------RRAVELLVEIN-----GKKIWVLDIHLKSFC---FLDSLENTYS 178
               +             A+  ++ +N     GK + ++  +        F D       
Sbjct: 318 HAEKSEDMINRVMTKDNIAMICVLRVNKTDSSGKPLRLIVANAHMHWDPEFSDVKIVQTV 377

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-------------------G 219
                +    + +   I       +P V+  D N   +                      
Sbjct: 378 MLVHEIYSLMKTIASEIDCAISE-IPLVVCADLNSLPSSAVVEMLTSGNVSVKHPDFKGK 436

Query: 220 NNDDFW----KTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVM-DQNAYKF 269
           + D ++      +   ++L+   K   +         N        IDY +   +  Y  
Sbjct: 437 SYDGYFNNSCNILTRENNLVLPFKLAHAANQDFLPYTNMTYDFTGIIDYILFPSKLLYPS 496

Query: 270 LIQESFSEILYNEDDIKSRGKR--LSDHCPISIDYDF 304
            I   +S+    E+ I         SDH  + I+ DF
Sbjct: 497 GILGGYSQAWVEENKIVGYPHPHVPSDHISVLIELDF 533


>gi|320094486|ref|ZP_08026261.1| hypothetical protein HMPREF9005_0873 [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319978579|gb|EFW10147.1| hypothetical protein HMPREF9005_0873 [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 830

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/347 (12%), Positives = 85/347 (24%), Gaps = 67/347 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWK----------------------NSVKRTTS 52
           P    V   VR+ ++N+       G                            S     +
Sbjct: 418 PGVPQVEGDVRVATFNVLNYFSDLGQDEPGCQGYPDREGAFVTAKKCKVRGAWSRAAFEN 477

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSY----------NAVAKVFPKNTWCIFYSTERLINHS 102
             T + Q    + AD+V L+E+ +            A+  +               +   
Sbjct: 478 QQTKIVQAINAIGADVVALEEIENPVAAGAGQDRDGALKALVDALNAHAGEQVWAHVPSP 537

Query: 103 KRDSNND--IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN---RRAVELLVEINGKKI 157
                ++  I  A   R+  +  + +S  L     +           A  +     GK  
Sbjct: 538 AAVPADEDVIRVAFIYRRATIEPVGESKILDDPAFTGLARQPLAQEFAPVVSAPRTGKNF 597

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK------DWITQKKESLVPFVIAGDF 211
            V+  H KS   +       +         +  ++           ++ +  P ++ GDF
Sbjct: 598 VVVANHFKSKGSVPQGMEEGNKDTGDGQGNSNAIRVAQARALAAFAEQFAGTPTLLVGDF 657

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N             K +     +            +         +D+   +  A   + 
Sbjct: 658 NSYSKEDP-----LKALTDAGWVHESADSAA----SYVYGGRSGSLDHVFSNAAADPLVR 708

Query: 272 QESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303
             +   +   E                       R SDH P  I  D
Sbjct: 709 GVASWALNAQESVAFEYSRANSNAHLAFEADNPYRSSDHNPEIIGLD 755


>gi|315452849|ref|YP_004073119.1| exodeoxyribonuclease [Helicobacter felis ATCC 49179]
 gi|315131901|emb|CBY82529.1| exodeoxyribonuclease [Helicobacter felis ATCC 49179]
          Length = 255

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 77/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RLVSWN+N L                         +     ADI  +QE       A  
Sbjct: 1   MRLVSWNVNGLRACMQKGFK---------------DFLLKSGADIFCVQETKMQPDQADF 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +N    + S +              ++ +    K+  +  +    L   D+  R    
Sbjct: 46  VFENYHAFWNSAQ-----------KKGYSGVLTLSKSAPLDVRYGLGLEEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    +  ++++++  +               S+  +  Q L         S  
Sbjct: 91  -----VITCEYEYFYLVNVYTPNSQRGLLRLPYRLQWESVFREFLQNLA--------SHK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                         + +  +     +  +      +    
Sbjct: 138 EVLICGDLNVAHTEIDLTNPQSNRYNAGFSDPERNAFGQLLQLGLIDTYRHFYPDKTEVY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF+  Q     L        +             SDHCP+ 
Sbjct: 198 TWWSYMNQSRARNIGWRIDYFLASQGLRSQLKDACIYAHIL-----------GSDHCPVG 246

Query: 300 IDYD 303
           ++  
Sbjct: 247 LEMS 250


>gi|225351376|ref|ZP_03742399.1| hypothetical protein BIFPSEUDO_02970 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157720|gb|EEG71003.1| hypothetical protein BIFPSEUDO_02970 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 286

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 59/312 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81
            + + + N+N +                 +    + ++A     D+  +QE+ +    + 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEEWAGRNTPDVWCMQEVRAPQNEID 46

Query: 82  KVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +        S +  ++             + +      V  + Y L G +D  
Sbjct: 47  PIFDEFGFEYSTAGRISDQSELHRMNEICRIKGRAGVGLLSALPVVD-KRYGLPGLEDDV 105

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWIT 196
                  A        G  I V+ +++ +    D  +          +  + + L+D   
Sbjct: 106 DSGRWIEADMQT--PQGYVITVVCVYVHAGNTDDPEKMKQKYRFLDTMLIRMEQLRD--- 160

Query: 197 QKKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKE 240
           +        V+ GDFN                             K +   + +      
Sbjct: 161 EAAHGGKQAVLCGDFNIAHTPLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRNL 220

Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                        +           IDY        +           +  D   +   R
Sbjct: 221 AGDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAETACG-------FVIDKAPTYDLR 273

Query: 292 LSDHCPISIDYD 303
            SDH P+SI YD
Sbjct: 274 WSDHAPLSIMYD 285


>gi|88801994|ref|ZP_01117522.1| exodeoxyribonuclease III [Polaribacter irgensii 23-P]
 gi|88782652|gb|EAR13829.1| exodeoxyribonuclease III [Polaribacter irgensii 23-P]
          Length = 253

 Score = 76.1 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 86/302 (28%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                         + +  + D++ +QE  ++      
Sbjct: 1   MKIISYNVNGIRAALKKGF---------------LDWLQVANPDVLCIQETKAHKD---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  S      +      +      A     +   + ++   G          R
Sbjct: 42  ------QLDLSEFENAGYPYHYWFSAQKKGYAS-VAVLCKEKPNHVEYGTGIETMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + ++   + V+ ++L S   LD L                 ++++I   K+ + 
Sbjct: 95  N-----LRVDFDAVSVMSMYLPSGTNLDRLNFK--------LNYMDEIQEYINNLKKEIP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP-------------NDSLIRFPKEKDSRCNANKN 250
             V+ GD+N     +  ++   K +                   +   +  +    A   
Sbjct: 142 NLVVCGDYNICHEEMDIHNPKMKGVSGFLPEERTWMSDFIKSGFVDSFRYLNQDVQAYSW 201

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           +DY ++       + +                  + SDHCPI ++
Sbjct: 202 WSYRANARANNKGWRLDYAMVSSALKAHISRA-----------YILSEAKHSDHCPIVVE 250

Query: 302 YD 303
            +
Sbjct: 251 LN 252


>gi|326929304|ref|XP_003210807.1| PREDICTED: deoxyribonuclease-1-like 2-like [Meleagris gallopavo]
          Length = 278

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 85/291 (29%), Gaps = 39/291 (13%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                +R+ ++NI             +S     S   ++    +    D+V +QE+   +
Sbjct: 18  PATATLRIGAFNIQAFG---------DSKMSDESVAGVIISILRRY--DVVLVQEVRDSD 66

Query: 79  ---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  +   N+         +     RD+  +++     R   V V+          +
Sbjct: 67  LSAVTELLEQLNSVSSSLYDYEISGPLGRDNYKEMYL-FIYRTDVVSVV-----DTYQYE 120

Query: 136 SFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                 +R    L V     K    + + L S     +  +  +   +L       +  W
Sbjct: 121 DQQDVFSREPFVLRVSAPHSKAEEFVMVPLHS-----APHDAVAEIDALYDVYLAVVNKW 175

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                      V  GDFN   +Y+  +D     +  +D       +         +    
Sbjct: 176 ------GTDNIVFLGDFNADCSYVKQSDWASIRLRSSDVFKWLIPDSADTTVGKSDCAY- 228

Query: 255 IPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
              D  V+      + ++  S +   +       + + L  SDH P+ +  
Sbjct: 229 ---DRIVVCGAKLKRSIVPNSATVYNFQHAFQLEQEEALAVSDHYPVEVKL 276


>gi|296169146|ref|ZP_06850802.1| endonuclease/exonuclease/phosphatase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295896195|gb|EFG75859.1| endonuclease/exonuclease/phosphatase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 254

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 76/307 (24%), Gaps = 82/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI                     +   LR   + LD D++ LQE+      ++ 
Sbjct: 1   MRVATFNILHGRTVGDG-----------VELQRLRDCVRRLDPDVLSLQEVDCDQPRSER 49

Query: 84  FP------------KNTWCIFYSTER---LINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                         ++ +    S       +  + R+        IA+  +      Q  
Sbjct: 50  ADLTAVAAEAMGAVEHRFVAAISGTPGATWMAATGREQPGTAAYGIALLSRYPVASWQVV 109

Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            L      F                 R AV   +      + V + HL      +     
Sbjct: 110 RLPRIPMRFPMYLPGPNRVMVVDEEPRAAVIAQLRTPMGGLTVANTHLSFVPGWNR---- 165

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                       + L+  +   +    P ++ GD N     +                  
Sbjct: 166 ------------RQLRRLVHDLRGFPGPRLLTGDLNMTPKTVRRWSGMRAL--------- 204

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                 +             +D+ + D                     + +    +SDH 
Sbjct: 205 ------ASAVTFPADAPDRQLDHILTDDR-------------RLRGGAVAAEPMGISDHR 245

Query: 297 PISIDYD 303
           P+ +D +
Sbjct: 246 PLVVDLE 252


>gi|238757025|ref|ZP_04618213.1| Exodeoxyribonuclease III [Yersinia aldovae ATCC 35236]
 gi|238704855|gb|EEP97384.1| Exodeoxyribonuclease III [Yersinia aldovae ATCC 35236]
          Length = 228

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/242 (10%), Positives = 57/242 (23%), Gaps = 47/242 (19%)

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150
                     +         H  +A+  K   +  +       +D+      RR +   +
Sbjct: 2   FPLEDVSQHGYHVFYHGQKGHYGVALLTKQEPLAVRRGFPTDEEDA-----QRRIIMADI 56

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
                 + V++       F       +        +    L++++ Q+  +    +I GD
Sbjct: 57  ATPQGPLTVIN-----GYFPQGESRDHPTKFPAKERFYADLQNYLEQQLSADAQVLIMGD 111

Query: 211 FNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            N     L                          + + +     +  F            
Sbjct: 112 LNISPTDLDIGIGEESRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRAANPDCNQQFS 171

Query: 250 NLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           ID  +  Q      I           D      ++ SDH P+  
Sbjct: 172 WFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYDIRSMEKPSDHAPVWS 224

Query: 301 DY 302
           ++
Sbjct: 225 EF 226


>gi|206558889|ref|YP_002229649.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
 gi|198034926|emb|CAR50798.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
          Length = 257

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 84/307 (27%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +                +    +AD V +QE  + + +  A
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEIKVSADDLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    + +  ++       +S     +       +              +G   S     
Sbjct: 47  EFVEPHGFKSYFHHAEKKGYSGAGVYSRREPDDVI--------------IGFGSSEFDPE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ V+ +++ S    +  +       +        L        + 
Sbjct: 93  GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMAEFMPHLAAL--------KK 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N     +   +                +   +  +   +   +  D R  
Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEEREWLTKLFDDVGYVDVFRTLDPRPE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             +  + SDH P
Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSASI-----------FKDIKFSDHAP 248

Query: 298 ISIDYDF 304
           +++DYD+
Sbjct: 249 LTVDYDY 255


>gi|162452973|ref|YP_001615340.1| endonuclease/exonuclease/phosphatase [Sorangium cellulosum 'So ce
           56']
 gi|161163555|emb|CAN94860.1| Endonuclease/Exonuclease/phosphatase [Sorangium cellulosum 'So ce
           56']
          Length = 343

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 78/283 (27%), Gaps = 42/283 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA 81
            +R+ S+N                      +   L+ +      D++ LQE   S   + 
Sbjct: 91  DLRVASFNT----------------GSRAMNIDRLKGFVAETRPDVLALQECSASEPELN 134

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             FP  +  +      +  H    + +     +  +  +  +L+    L  A    S   
Sbjct: 135 AAFPGWSVHVDTGMCLVSRHPLLKAESRDRRDVWDKGGHGAILRYEIALPDALRPSSEEP 194

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               V  L+ ++ +        L    +    E+    +      +    + W+ +   +
Sbjct: 195 RGTRVFSLLNLHLETPREAIEALIHGLWKQEAEHDRVIALRAWESELA--RQWVDE---A 249

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P V+AGDFN  ++       +    +                         + ID+ +
Sbjct: 250 PYPVVVAGDFNMPVDSAIYRRFWAGFENAFSRAGLGFGATKRTRW------FGVRIDHVL 303

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                             +  +         SDH PI  D  +
Sbjct: 304 AGPG--------------WTTERAWIGPDLGSDHLPIVADLRW 332


>gi|71280189|ref|YP_268051.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
           psychrerythraea 34H]
 gi|71145929|gb|AAZ26402.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
           psychrerythraea 34H]
          Length = 410

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/367 (11%), Positives = 98/367 (26%), Gaps = 88/367 (23%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQ 72
             +    ++++ ++N+    E              ++       + +Y      DI+  Q
Sbjct: 34  SVSVANTQLKVATFNLFNYLEPPNAYYEFERIYSAEQWAKKQKWVAEYLSEFQPDIIGFQ 93

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--- 129
           E+ S +++ ++     +  +++                  AIA R     V         
Sbjct: 94  EVFSADSLKELVAAQGY-AYFAVVDQPTVIDDFIYRSPVVAIASRYPITEVAAVKANTEL 152

Query: 130 LLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSL----- 183
                 +   + +R+ +   VE+    K     +H KS   +  ++   +          
Sbjct: 153 AQTLGLANDFSFSRKVIRATVELPHMGKCDCYVVHFKSKRSMIEIDEKKNHWSPEKTIIE 212

Query: 184 ---------------LSQQAQWLK-DWITQKKESLVPFVIAGDFNRKIN----------- 216
                             +A  L  D I +++ +  P V+ GDFN  ++           
Sbjct: 213 SLKANVAGGWGSTIQRGSEATLLMIDMIERREATGNPMVLMGDFNNTLDDGVLSHLLTNT 272

Query: 217 ----YLGNNDDFWKTIDPNDSLIR------------------------------------ 236
                  + D +      ND+                                       
Sbjct: 273 LRFVSAIDRDAYLAKYCLNDAWDLLQTAIKNEQHEASKADEDSKNTSDIVEKNDTADTKN 332

Query: 237 --FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------IKSR 288
               +E+  R   +    +   +DY ++            +    Y+  D      I  R
Sbjct: 333 SSAREEQIVRTPTHYFGADSSVLDYILLSCEFDASYHDSLYQVSAYDTYDRHLINPIFER 392

Query: 289 GKRLSDH 295
               +DH
Sbjct: 393 DGESTDH 399


>gi|81428949|ref|YP_395949.1| exodeoxyribonuclease III [Lactobacillus sakei subsp. sakei 23K]
 gi|78610591|emb|CAI55642.1| Exodeoxyribonuclease III [Lactobacillus sakei subsp. sakei 23K]
          Length = 254

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 74/302 (24%), Gaps = 78/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                           +  DAD   LQE     A    
Sbjct: 1   MKFISWNVNGLRAVLKKDFMT---------------TFEQFDADFFCLQETK-MQAGQVE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S            A+  K+  +           D   R    
Sbjct: 45  LDLPGYHQYFNYAEKKGYSGA----------AIFTKHEPLNVTYGIQQPEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +++  +  +        +      +      Q L         +  
Sbjct: 91  -----VITLEYPQFFLITCYTPNSQNQLKRLDYRMTWENAFRAYVQQL--------GTQK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                   +         T+  +     F      + +  
Sbjct: 138 PVIFCGDLNVAHEAIDLKNDRTNHKSAGFSDEERVQMTTLLQSGFTDTFRYFYPDQTDIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+        L+       +Y            SDHCP+ 
Sbjct: 198 SWWSYRFHARDNNAGWRIDYFITSDELQPKLMDAKIHTEIY-----------GSDHCPVE 246

Query: 300 ID 301
           +D
Sbjct: 247 LD 248


>gi|126651518|ref|ZP_01723722.1| exodeoxyribonuclease [Bacillus sp. B14905]
 gi|126591771|gb|EAZ85867.1| exodeoxyribonuclease [Bacillus sp. B14905]
          Length = 251

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +    G                    +   ++AD   +QE        ++
Sbjct: 1   MKFISWNVNGIRACLGKGF---------------LDFFHQIEADFFCIQETKCQAGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    +   +              ++  A+  K+  +      + G  D  S+   R
Sbjct: 46  ALDDYEQYWNYAQ-----------KKGYSGTAIFTKHTPLSV----MYGVGDEDSQDEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  +  ++++++  +     +           L+   Q L         S  
Sbjct: 91  I-----ITLEYQNFYLVNVYTPNAQRDLARLPLRLTWEDRLAGYLQDLN--------SKK 137

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V  GD N     +                     +  +  +  +  F  +  +  +  
Sbjct: 138 PVVYCGDLNVAHTEIDLKNAKSNVGNSGFTYEERAKFSELLASGFVDSFRYKHPNETDHF 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +     + Q +    +             SDHCPI 
Sbjct: 198 TWWSYMNKVRERNIGWRIDYFIVSEQLKNQIDQATIHPHI-----------MGSDHCPIE 246

Query: 300 IDY 302
           +  
Sbjct: 247 LQL 249


>gi|42518122|ref|NP_964052.1| exodeoxyribonuclease [Lactobacillus johnsonii NCC 533]
 gi|41582406|gb|AAS08018.1| exodeoxyribonuclease [Lactobacillus johnsonii NCC 533]
 gi|329666434|gb|AEB92382.1| exodeoxyribonuclease III [Lactobacillus johnsonii DPC 6026]
          Length = 275

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 89/305 (29%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWNI++L+        +  + R+      +    K  DADI+ +QE    +     
Sbjct: 1   MRLISWNIDSLNAALTSDSPRAQLTRS------VLNTIKEKDADIIAIQETKLRSTGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +     +  S  +     +       KN    + + P +GA D+    G  
Sbjct: 55  KHQEVLAEMFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPTIGAPDTMDYEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  ++  Q L        +   
Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLEDRQIWDEKYTEYLQKL--------DKSK 160

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GD+N                   +       +  +        F K   +     
Sbjct: 161 PVIASGDYNVAHTPIDLKHPENNHHNAGFTDEERQGFDKLLKLGFTDTFRKVHGNVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +    +           DHCPI
Sbjct: 221 SWWAQRVRTSKDNNSGWRIDYYIVSDRIADQVTKSEMIDTGDRK-----------DHCPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 MLEIN 274


>gi|288574097|ref|ZP_06392454.1| exodeoxyribonuclease III Xth [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569838|gb|EFC91395.1| exodeoxyribonuclease III Xth [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 259

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 78/302 (25%), Gaps = 70/302 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
            + ++N+N                   S   +L ++  +   D++ LQE  + +      
Sbjct: 4   TIATFNVN----------------SVRSRLPILERWLNDSKVDVLCLQETKARDE----- 42

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                         + +         +  +A+      + +    + G  D      + R
Sbjct: 43  -----DFPLQAFVDMGYFVAFRGQKSYNGVAIAS----LEEPDEIVYGFDDGKEPVFDTR 93

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           A+ +        IWV++ ++     +D  +          +      +  I+ +      
Sbjct: 94  ALSVRF----GDIWVMNTYVPQGKSIDHDDYLMKQEFLRRT------QRTISDRISDGKR 143

Query: 205 FVIAGDFNRKINYLGNNDD--------FWKTIDPN-----DSLIRFPKEKDSRCNANKNL 251
            +  GD N         +         F + I          L+   +            
Sbjct: 144 VLWVGDMNVAPEEKDVANPKNKAKHVCFHRDIRDLFGTVCQGLVDVFRSHRPEEGEFSFW 203

Query: 252 RNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +            ID+ +   +  K                     ++ SDH P+   
Sbjct: 204 DYRVKNALDRNIGWRIDHILASPDLAKLSSDSWV-------YRDPRGWEKPSDHTPVLAS 256

Query: 302 YD 303
           +D
Sbjct: 257 FD 258


>gi|224069926|ref|XP_002193876.1| PREDICTED: deoxyribonuclease I [Taeniopygia guttata]
          Length = 284

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/287 (11%), Positives = 79/287 (27%), Gaps = 30/287 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A  +++ ++NI             ++     +   ++         DIV +QE+   +  
Sbjct: 20  ATTLKIGAFNIKAFG---------DTKMSNQTVANIIISVLSEY--DIVLVQEVRDADMS 68

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           AV  +  +      +    L++     ++         R   V VL   Y   G +   +
Sbjct: 69  AVNYLMDQLNSAGKHPYSSLVSVPLGRTSYKEQYLFIYRSDMVSVLGSYYYDDGCESCGN 128

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            + +R    +       ++    +                   +L       +  W    
Sbjct: 129 DSFSREPFIVKFSSPTTQVQEFVLVPLHSEPSH----AAQEIDALYDVYTDVINKW---- 180

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                  +  GDFN   +Y+ ++      +    +      +      A+ +       D
Sbjct: 181 --GTNDMIFLGDFNAGCSYVTSSQWPSIRLRSLPACEWLIPDSADTTVADTDCAY----D 234

Query: 259 YFVMDQ-NAYKFLIQESFSEILY--NEDDIKSRGKRLSDHCPISIDY 302
             V       +     S +   +             +SDH P+ +  
Sbjct: 235 RIVACGTALRQGTEPGSATINNFQQKFHLQMKDALAVSDHFPVEVTL 281


>gi|78047637|ref|YP_363812.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325927635|ref|ZP_08188864.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118]
 gi|78036067|emb|CAJ23758.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325542002|gb|EGD13515.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118]
          Length = 331

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 75/301 (24%), Gaps = 71/301 (23%)

Query: 21  AQKVR-LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +  +R + ++N+N ++                     L ++ +    DIV LQE+ S  A
Sbjct: 2   SGTLRKIATFNVNGIAS----------------RLPHLLEWLQREQPDIVGLQELKSTQA 45

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                            R   +            +A+  +    ++    L         
Sbjct: 46  A----------FPEQAIRDAGYGVIWQGEKSWNGVALLARGTEPVEIRRGLPWD------ 89

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      +E     + V  ++L +       +  Y  +        + L        
Sbjct: 90  --PRDTQSRYLEAAIHGVVVACLYLPNGNPQPGPKFDYKLA------WFERLIRHAKTLV 141

Query: 200 ESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSR 244
           +   P  + GDFN         D                 ++T+                
Sbjct: 142 DLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQTLLAQGWTDSLLAIHGHT 201

Query: 245 CNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                    +          ID+ ++++     L            D      ++ SDH 
Sbjct: 202 PIYTFWDYFRQHFARDRGLRIDHLLLNRTLAPDLQDAGV-------DKWVRALEKASDHA 254

Query: 297 P 297
           P
Sbjct: 255 P 255


>gi|45358575|ref|NP_988132.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis S2]
 gi|44921333|emb|CAF30568.1| exonuclease III [Methanococcus maripaludis S2]
          Length = 249

 Score = 76.1 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N +                         + +    DI+ +QE    +     
Sbjct: 1   MKMLSWNVNGIRACLKNGFM---------------NFLERESPDIMCIQETKVQSG-QVQ 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++      +S       I     +               G ++S      R
Sbjct: 45  LGLDGYFQYWNYAERKGYSGTAIFTKIKPNNVIL--------------GMENSEHNNEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + ++++++  +     +                + L+        +  
Sbjct: 91  -----VITLEFDEYYLVNVYTPNSQRGLTRLEYRQKWDEDFLSYIKTLE--------TKK 137

Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCN-------ANK 249
           P V  GD N     +   +         +   + N                         
Sbjct: 138 PVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNGFDNIVNSGFLDTFREFNNEPDNYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + ++    L            D         SDHCP+ I
Sbjct: 198 WWSYRFNARARNIGWRIDYFCISKSLRNNLK-----------DAYIMPEVMGSDHCPVGI 246

Query: 301 DYD 303
            ++
Sbjct: 247 IFE 249


>gi|312863077|ref|ZP_07723315.1| exodeoxyribonuclease III [Streptococcus vestibularis F0396]
 gi|322516276|ref|ZP_08069206.1| exodeoxyribonuclease [Streptococcus vestibularis ATCC 49124]
 gi|311100613|gb|EFQ58818.1| exodeoxyribonuclease III [Streptococcus vestibularis F0396]
 gi|322125249|gb|EFX96622.1| exodeoxyribonuclease [Streptococcus vestibularis ATCC 49124]
          Length = 275

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSR------AVIDTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++        S  +     +       K       +YP +GA  +    G  
Sbjct: 55  KHLQILEDYFPDYVNTWRSSVEPARKGYAGTMFLYKKELTPIITYPEIGAPSTMDCEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        ++  
Sbjct: 114 -----IITLEFANFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAKL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        +         A 
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNLLAKGFTDTYRHLNGDVTGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +            D I S  ++  DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVT---------KSDMINSGDRQ--DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|189466215|ref|ZP_03015000.1| hypothetical protein BACINT_02585 [Bacteroides intestinalis DSM
           17393]
 gi|189434479|gb|EDV03464.1| hypothetical protein BACINT_02585 [Bacteroides intestinalis DSM
           17393]
          Length = 370

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 86/290 (29%), Gaps = 47/290 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+                + T      + +Y K  + D++  QE G        
Sbjct: 111 LKVATYNVGNFGT-----------EITGYSCKEIARYMKQQEVDVLCFQEFGDNQH---- 155

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP ++    +S  R       DS       IA+  +   +  +      + +   +    
Sbjct: 156 FPMDSIRNVFSHWRYALIPTEDS-ISGVLPIAIFSRYPLINPRFISYPQSANCSMQCDII 214

Query: 144 RAVE-LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQKKES 201
              + + +  N  +   ++ + + +    +  N       ++      L D ++ + +++
Sbjct: 215 LGRDTVRLLNNHLQTTSVNQNRRKWERGLNNTNDTRREVEVVQGAINTLHDNFVKRAEQT 274

Query: 202 L----------VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                         V+ GDFN   +      +    +        F           +  
Sbjct: 275 DSIRQLALASPYSVVVCGDFNSLPSSYT-YAELSDILKDG-----FRTSGRGYMYTFRYF 328

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +  + IDY         +       ++              SDH P+ ++
Sbjct: 329 KRLLRIDYIFHSPAIQGYRYYSPDLDLC-------------SDHNPVLME 365


>gi|93005871|ref|YP_580308.1| endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis
           K5]
 gi|92393549|gb|ABE74824.1| Endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis
           K5]
          Length = 341

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 80/318 (25%), Gaps = 49/318 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           + + N+   +    +                   +        ADI+ +QE+    A+  
Sbjct: 14  IATANLLNFANPNRLYYPNAPAYTNHEYEHKLRGITYLLSKAHADIIAVQEVWDSEALEA 73

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIH-------TAIAVRKKN------VRVLQQSYP 129
           +     +   +    L ++   +S    +         I  R  +        ++ ++  
Sbjct: 74  LAVSLGFKPEHVVIPLASNDSVNSYTQGNGAQNTPAVGIISRFAHLETSLLEEIVPKAVI 133

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-------------DSLENT 176
            +     + R  NR  + L V+  G+ I ++  HLKS                 D     
Sbjct: 134 DIPDVGPYQR-FNRPPLVLRVDAFGQPITIITAHLKSKRAFFLRDEAGNLLEDMDDPNIR 192

Query: 177 YSPSCSLLSQQAQWLK----DWITQKKESLVPFVIAGDFNRKINY------------LGN 220
                  L  +A          I + + +  P ++ GD N                   +
Sbjct: 193 IRAKLRSLCMRAAEAASIRLSIIDRLQHTREPLILLGDMNDVTESVTTQLMTETGEVNYD 252

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE---SFSE 277
                  +     +             +        ID   + +                
Sbjct: 253 KSMRDVALFDAARIQARYGWMKDVAYTHIYQGMPEVIDQLFVSEEFLPDSKFSLGQVERV 312

Query: 278 ILYNEDDIKSRGKRLSDH 295
             +N+        R+ DH
Sbjct: 313 DYFNDHLKWDYADRVIDH 330


>gi|315223362|ref|ZP_07865221.1| exodeoxyribonuclease III [Capnocytophaga ochracea F0287]
 gi|314946693|gb|EFS98682.1| exodeoxyribonuclease III [Capnocytophaga ochracea F0287]
          Length = 254

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+N+N +                        ++ K+ + D++ LQE+ +       
Sbjct: 1   MKTISYNVNGIRAALTKGF---------------AEWLKSANPDVLCLQEIKATED---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +S           +    ++ +A+  K        +  +G    +     R
Sbjct: 42  ---QIPTEVFSELGYKYQYYHSAEKKGYSGVAILSKIEP----KHVEVGTGIDYMDKEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++  + + + V+ ++L S    D                    K +I + K+ + 
Sbjct: 95  -----VLRADFETLSVMSLYLPSGTNPD--------RLDFKLTFMADFKKYIDKLKQKVP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
             VI GD+N     +  +D                          I   +      +   
Sbjct: 142 NLVICGDYNICHEAIDIHDPIRNANVSGFLPIEREWLDKFMKSGFIDSFRYFHKEAHQYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++       + +                  + SDHCPI +
Sbjct: 202 WWSYRANARNNNKGWRIDYHLVSTPLENRMERALIL-----------PEAKHSDHCPILL 250

Query: 301 DYD 303
             +
Sbjct: 251 IIN 253


>gi|322433843|ref|YP_004216055.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX9]
 gi|321161570|gb|ADW67275.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX9]
          Length = 1139

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/352 (10%), Positives = 87/352 (24%), Gaps = 71/352 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVS------------------------------LWK 44
             T   + +  + S+NI                                           
Sbjct: 493 AVTLPASNEFTVASFNIERFYNTSSADDLYYVPAGVNGYNGSSGTAIVSTGQTFISEAAD 552

Query: 45  NSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAVAKVFPKNTWCI-----FYSTER 97
           N+        T L    + +    D+V ++E+ + +    +  +          + +   
Sbjct: 553 NTPAAYARRLTKLSLAIRTVLNSPDVVTIEEVENQSVANDIAAQINSDAGVTNLYTAFST 612

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRV------LQQSYPLLGAKDSFSRAGNRRAVELLVE 151
                       I     ++     +        +++       +         +   ++
Sbjct: 613 DNKTYYTQDGTGISVGFLIKNTVDNLGVTQYGAGETFTPTSGSLTTLNDRPWLVLSAGIK 672

Query: 152 ----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
               +    I V+  H+K+     S     +     L  QA+ +  +I  ++ +    + 
Sbjct: 673 RAAGVKDYPITVVVNHMKALTGQSSATTNSTRLKKEL--QAEDIAKFIQTQQAAGKHVIS 730

Query: 208 AGDFNRKINYLGNNDDFWKTIDPN------------------DSLIRFPKEKDSRCNANK 249
            GDFN      G ND      + N                             ++  +  
Sbjct: 731 GGDFNAFEFSDGYNDTLGTYTNTNVLPATQVLQPGVAGLVTPPLTDLALTIPAAQRWSYV 790

Query: 250 NLRNKIPIDYFVMDQNA----YKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              +   +D+ V+          F      ++      +  +   R SDH P
Sbjct: 791 EDGSAQILDHMVVTPELVAAGAHFAYGHLNADFPLTAYNDATTAARNSDHDP 842


>gi|298528123|ref|ZP_07015527.1| exodeoxyribonuclease III [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511775|gb|EFI35677.1| exodeoxyribonuclease III [Desulfonatronospira thiodismutans ASO3-1]
          Length = 254

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 78/303 (25%), Gaps = 77/303 (25%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAKV 83
           + SWN+N      G   W                + ++ + D++ LQE  +      AK 
Sbjct: 3   IYSWNVNGFRAVTGKGFW---------------DWFQDRNIDVLCLQETKAHPDQLPAKD 47

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + + I+++  R+            ++  A   +        Y   G          R
Sbjct: 48  KEVSGYNIYWNPARIK---------KGYSGTACFYRLEP----QYISTGLPQEHLNGEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +        +  ++ +++  +                   + AQ L+           
Sbjct: 95  MILM-----EYESFYLFNVYFPNGQMSHERLKFKLNYYDRFLEYAQDLRR--------KK 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V+ GDFN     +                       K ID           ++     
Sbjct: 142 PIVVCGDFNTAHKDIDLKNPRANEDRSGFLPVERQWLDKFIDHGYVDTFRMFNQEGGNYT 201

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               R           IDYF + +     +                      SDHCP+ +
Sbjct: 202 WWTYRFGARSRNAGWRIDYFFVSEELRSNVQNAWIE-----------PQVMGSDHCPVGL 250

Query: 301 DYD 303
             +
Sbjct: 251 KLN 253


>gi|71065887|ref|YP_264614.1| endonuclease/exonuclease/phosphatase family protein [Psychrobacter
           arcticus 273-4]
 gi|71038872|gb|AAZ19180.1| possible endonuclease/exonuclease/phosphatase family protein
           [Psychrobacter arcticus 273-4]
          Length = 341

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 73/317 (23%), Gaps = 47/317 (14%)

Query: 26  LVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           + + N+   +    +                   +        ADI+ +QE+    A+  
Sbjct: 14  IATANLLNFANPNRLYYPNAPAYSNHEYEHKLRGITDLLSKAHADIIAVQEVWDSEALIA 73

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIH-------TAIAVRKKNVRVLQQSYPLLG--- 132
           +     +   +    L ++                   I  R  ++        L     
Sbjct: 74  LAVSLGFKPEHVVIPLASNDSASPYTQGKGAQNTPAVGIISRFAHLESRLLEDILPKAII 133

Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-------------DSLENTY 177
                   +  NR  + L V+  G+ I ++  HLKS                 D      
Sbjct: 134 NIPDIGPYQRFNRPPLVLRVDAFGQPITIITAHLKSKRAFFLRDEAGNLLEDMDDPNIRI 193

Query: 178 SPSCSLLSQQAQWLK----DWITQKKESLVPFVIAGDFNRKINY------------LGNN 221
                 L  +A          I + + +  P ++ GD N                   + 
Sbjct: 194 RAKLRSLCMRAAEAASIRLSIIDRLQHTREPLILLGDMNDVTESVTTQLMTETGEVNYDK 253

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE---SFSEI 278
                 +     +             +        ID   + +                 
Sbjct: 254 SMRDVALFDAARIQARYGWMKDVAYTHIYQGMPEVIDQLFVSEEFLPDSKFSLGQVERVD 313

Query: 279 LYNEDDIKSRGKRLSDH 295
            +N+        R+ DH
Sbjct: 314 YFNDHLKWDYADRVIDH 330


>gi|326331009|ref|ZP_08197308.1| exodeoxyribonuclease III [Nocardioidaceae bacterium Broad-1]
 gi|325951220|gb|EGD43261.1| exodeoxyribonuclease III [Nocardioidaceae bacterium Broad-1]
          Length = 260

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 68/301 (22%), Gaps = 65/301 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   S    +  + +    D++ LQE  +       
Sbjct: 1   MRIATWNIN----------------SIRSRIDRVEAFVERHSIDVLALQETKAKPD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  I         +       D    +A+  +           +        +   
Sbjct: 41  ------QIPTMGLEARGYEVASVGYDQWNGVALISRVG------LSDIQVGFEGMPSFKD 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    +      + V  +++ +    D     Y        +    L+   T   +   
Sbjct: 89  VAEARALTATCGGVRVTSVYVPNGRKPDDPHYAYK------LEWLAALQKAATAWYDG-- 140

Query: 204 PFVIAGDFNRKINYLGNNDDFW-------------KTIDPNDSLIRFPKEKDSRCNANKN 250
           P  + GD+N         D                             +       A   
Sbjct: 141 PSAMVGDWNVCPFDEDCFDPKQFVGKTHLTPAERDAFFAIEKDFKDVVRPFVPGPEAYTY 200

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                          ID+ +   +    +          +E +        SDH P+ +D
Sbjct: 201 FDYYRQRFERNRGLRIDFVLGSPSFASRVTDAFVD---LDERNPAIGTGAPSDHAPVIVD 257

Query: 302 Y 302
            
Sbjct: 258 L 258


>gi|227889124|ref|ZP_04006929.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200]
 gi|227850353|gb|EEJ60439.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200]
          Length = 275

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 89/305 (29%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWNI++L+        +  + R+      +    K  DADI+ +QE    +     
Sbjct: 1   MRLISWNIDSLNAALTSDSPRAQLTRS------VLNTIKEKDADIIAIQETKLRSTGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +     +  S  +     +       KN    + + P +GA D+    G  
Sbjct: 55  KHQEVLAEIFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPAIGAPDTMDYEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  ++  Q L        +   
Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLKDRQIWDEKYTEYLQKL--------DKSK 160

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GD+N                   +       +  +        F K   +     
Sbjct: 161 PVIASGDYNVAHTPIDLKHPENNHHNAGFTDEERQGFDKLLKLGFTDTFRKVHGNVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +    +           DHCPI
Sbjct: 221 SWWAQRVRTSKDNNSGWRIDYYIVSDRIADQVTKSEMIDTGDRK-----------DHCPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 MLEIN 274


>gi|85712710|ref|ZP_01043755.1| Uncharacterized conserved secreted protein [Idiomarina baltica
           OS145]
 gi|85693442|gb|EAQ31395.1| Uncharacterized conserved secreted protein [Idiomarina baltica
           OS145]
          Length = 397

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/391 (10%), Positives = 98/391 (25%), Gaps = 88/391 (22%)

Query: 1   MIRKYVLALVFFLV-PCTASVAQKVRLVSWNI-----NTLS----EQEGVSLWKNSVKRT 50
           M   +V +L+  +     +     VR+ ++N+     N L          S+    ++  
Sbjct: 4   MRSIFVFSLLLIMTYSNFSLAQDSVRIATFNVSMDSSNHLPNSELPNTHASVLPRVLQEN 63

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMG------------------SYNAVAKVFPKNTWCIF 92
            +    + +  + +  DI+ L E                    S N +  +     +   
Sbjct: 64  NAQIRGIAEIIQRVRPDIILLNEFDYVPQEQGIDVFLNSYLGESQNNLKPISYPYVYTAP 123

Query: 93  YS--------------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------------- 125
            +                   N +           + +  K   + +             
Sbjct: 124 VNTGSPSAFDLNRDGKATGRGNDAWGFGWYPGQYGMVILSKYPILREQIRTFQHFLWKDM 183

Query: 126 --QSYPLLGAKDSFSRAGN--------------RRAVELLVEINGKKIWVLDIHLKSFCF 169
                P +  ++                     +   ++ V+I GK + VL  H     F
Sbjct: 184 PGHHVPYVHDEEGKPTNEPWYSDEAMAQYPLSSKSHWDVPVQIGGKVVHVLAQHPTPPAF 243

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV----------PFVIAGDFNRKINYLG 219
                     +   +     +L                       FV+ GD N +    G
Sbjct: 244 DGPENRNGMKNYDEIRFVRDYLTPGADNYIYDDQGQRGGIAANGSFVVLGDLNAQAGASG 303

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNKIPIDYFVMDQNAYKFLIQ 272
            +    + ++        P  +    ++             +  +DY +   +       
Sbjct: 304 VDGAMTQLLEHPRVNDVMPMSEGGANHSPDIEGSKYHTAAWRKRVDYVLPSDDLIVKDAG 363

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +        ++  +    SDH  + +D +
Sbjct: 364 IFWPVQGEPGYELMKKRDASSDHRLVWLDIE 394


>gi|157826086|ref|YP_001493806.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford]
 gi|157800044|gb|ABV75298.1| Exodeoxyribonuclease III [Rickettsia akari str. Hartford]
          Length = 260

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 86/303 (28%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +   LLR +    + DI+ LQE+         
Sbjct: 1   MKIATWNIN----------------SIKTRLNLLRNFLSQENPDILLLQEIKCKTE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    +++     R
Sbjct: 41  ------NFPFDELSDLPYNFYVHGQQSYNGVAIISKFP----ADEIIKDFPNNYCSDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + +      ++ ++  +  F+ S +     +            ++++ KK    
Sbjct: 91  F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAF------YDNFINYLSTKKSFDE 143

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N     +                      +TI        +     S+  A 
Sbjct: 144 KTIIGGDLNIAPFDIDVYSPKILSETTCFTEVEQKKLRTILNAGFEDLYRLMHPSK-QAF 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L            D      ++ SDH P+ 
Sbjct: 203 SWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYM-------DYNLRTQEKPSDHIPVI 255

Query: 300 IDY 302
             +
Sbjct: 256 ASF 258


>gi|331002672|ref|ZP_08326187.1| exodeoxyribonuclease [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330407085|gb|EGG86589.1| exodeoxyribonuclease [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 262

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 80/307 (26%), Gaps = 78/307 (25%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+  +++SWN+N L                         + +++DADI  +QE    +  
Sbjct: 9   AKTKKMISWNVNGLRAAVTKGF---------------LDFFRDIDADIFCIQE-SKLSEG 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +  +++           +    ++ +AV  K+  +       +   D+  R 
Sbjct: 53  QIELDLPGYYDYWN----------YAAKKGYSGVAVFTKDKPIGVTYGIGIEEHDNEGR- 101

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   ++       +++  +  +     +  +               L++       
Sbjct: 102 --------VITAEYDDFYLITCYTPNSQRGLTRLDYRMAWEDAFLDYVLKLEE------- 146

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              P +  GD N                              +  +     F      + 
Sbjct: 147 -KKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKMDIVLSSGFADSFRVLYPDKE 205

Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            A                  IDYF++       + +      +             SDHC
Sbjct: 206 GAYSWWSYMGGARAKNVGWRIDYFIVSDKLKDRIKEAKIHSDIL-----------GSDHC 254

Query: 297 PISIDYD 303
           P+ +D +
Sbjct: 255 PVELDIE 261


>gi|294674138|ref|YP_003574754.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
 gi|294472322|gb|ADE81711.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
          Length = 311

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/256 (11%), Positives = 63/256 (24%), Gaps = 31/256 (12%)

Query: 66  ADIVFLQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            D+V L E+ + + +             Y      +  +R  +  +  A A         
Sbjct: 70  PDLVALCEVENDSVMRDFTRRSLLRHAGYQYLMTSSPDERGIDVALLYAPASFAPIRSYA 129

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            +  P+ G          R  +    E ++G  + V  +H  S    +     +  + + 
Sbjct: 130 IRVNPVEG------MRVTRDILYACGETVSGDTLHVFVVHQPSKFGGEKHSRPFRLAVAD 183

Query: 184 LSQQ-AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              Q    ++             ++AGDFN               +          K  +
Sbjct: 184 RLCQSIDSIRA-----ISPDAKLMVAGDFNDGALSPSLLQYEQHGLVNLTKH---AKGAN 235

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE--------------ILYNEDDIKSR 288
                 +       ID+ +   +    +                                
Sbjct: 236 GVRGTYRYKGEWESIDHILGSSSINNKVDTAFIHAPKFLLEEDARYGGYRPRRTYIGPRY 295

Query: 289 GKRLSDHCPISIDYDF 304
               SDH P+ +   F
Sbjct: 296 QGGFSDHLPLVVRLIF 311


>gi|282878286|ref|ZP_06287082.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281299704|gb|EFA92077.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 359

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/356 (10%), Positives = 91/356 (25%), Gaps = 71/356 (19%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------S 46
           M + ++L  +  +     S   K  +     +N   L +        +            
Sbjct: 11  MKKLFMLLGLLVVGFMAISGQDKYSVYAVGFYNQENLFDTCHDEGKNDYDFLPNGSYKWD 70

Query: 47  VKRTTSDYTLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
             + T+    + +   ++  D+        + L E+ +   +  +          +    
Sbjct: 71  GLKYTNKLRNMARALADMGTDVLPNVGCALIGLSEVENARVLDALVA---QEPLAARGYR 127

Query: 99  INHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
             H +      I  A+    +  +    +  P +   +  S    R  + +   + G  +
Sbjct: 128 YIHVEGPDRRGIDCAVLYNPQLFKPASVKLVPYVQPLEKDSAYFTRGFLTVTGTMGGDHV 187

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
             +  H  S           S    + + Q + +KD + Q  +     ++ GD N     
Sbjct: 188 AAIVCHWPSRYSG-------SFYREVAAAQVKAIKDSLLQ-LDPATKVMVMGDMNDDP-- 237

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK----------NLRNKIPIDYFVMDQNAY 267
              N    + +     +             N                   D  V+  N  
Sbjct: 238 --VNKSMAEVLSAKAEIDDVGDGDMYNPWYNILANHGRGTLMYQGGWNLFDQIVLSPNML 295

Query: 268 KFLIQESFSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
               +  +S + Y +  I                              SDH P+ +
Sbjct: 296 NQNGKRDYSSLKYWKGQIVRYDYLIQSTGKYKGAPKRTTAGGVWLNGYSDHLPVVV 351


>gi|227512799|ref|ZP_03942848.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577]
 gi|227083999|gb|EEI19311.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577]
          Length = 252

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 73/301 (24%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                        +  + LDAD   +QE          
Sbjct: 1   MKFISWNVNGLRAVVKKDF---------------AEIFQKLDADFFCIQETKMQEG-QLK 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                       +  PL  +    +   + 
Sbjct: 45  LDLPGYRQYFNYAERKGYSGTAIF-----------------AKDEPLTVSYGIQAPEFDH 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +++  ++ +        +               L        +S  
Sbjct: 88  EGRAITLEYPN--FYLVTSYVPNSGAKLKRLDFRMGWDKAFHAYLNQL--------DSHK 137

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +     +  F      + +  
Sbjct: 138 PVILCGDLNVAHYEIDLKNPQSNHHNAGFTDEERQSFTKLLDQGFMDTFRHFYPDKEDIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV  +     +        ++            SDHCP+ 
Sbjct: 198 SWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIF-----------GSDHCPVE 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|284799781|ref|ZP_05984844.2| endonuclease/exonuclease/phosphatase family protein [Neisseria
           subflava NJ9703]
 gi|284797131|gb|EFC52478.1| endonuclease/exonuclease/phosphatase family protein [Neisseria
           subflava NJ9703]
          Length = 249

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 81/256 (31%), Gaps = 37/256 (14%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMG----SYNAVAKVFPKNTWCIFY-STERLINHSKRD 105
                 +      L +D++FLQE+     + +          + I   S +   ++ K  
Sbjct: 11  KVQVNRMADALGALGSDVLFLQEVQGQHLNRSRRTDFPDAPHYDIIGDSLDYHRSYGKNA 70

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
                H   A+  +     + +  +     S ++   R  +   V   G +  ++ + + 
Sbjct: 71  VYPKRHHGNAILSRLPLKTENNLNI-----SVNKLEQRGLLHCEVVPEGWEDPLVCLCVH 125

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                               +Q + + D++ +      P +IAGDFN       +  +  
Sbjct: 126 LNLREPD-----------RLKQYRAISDYVGRYIRPESPLIIAGDFNDW--RQKSARELG 172

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             +D N+    F      R     +    + +D                  +++ +E   
Sbjct: 173 SALDLNE---VFVDNTGKRPKTFPSRLPILSLDRIYTRN-----------LDVIDSEIHN 218

Query: 286 KSRGKRLSDHCPISID 301
               + LSDH P+S+ 
Sbjct: 219 SKDWQHLSDHLPLSVT 234


>gi|240278580|gb|EER42086.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus H143]
          Length = 299

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 74/295 (25%), Gaps = 23/295 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        K    R       L  ++ +     + LQE+        
Sbjct: 8   PIRILTHNIRY-ATSAPFRGEKPWKDRKQRLLNELHYHSCHNPETFICLQEVLHVQLNDI 66

Query: 83  VFPKNT-----------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +   N            W            +   S      A+   ++   V     P +
Sbjct: 67  LSGLNPSTSTSTGATTEWAYIGVGRDDGKQAGEYSPIFYRPAVWELEEFKTVWLSETPSV 126

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                +  +  R     + +    +  VL +        D    +   +  L+   A   
Sbjct: 127 P-SRGWDASSIRIVTIGVFKHLVSRKRVLGMSTHL---DDQGSKSRYEAAKLILTMANLY 182

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRCNAN 248
                    ++    +AGDFN + N            + +D    +    +         
Sbjct: 183 LTKNRLASRNINGIFLAGDFNSEENQEAYRVLTAVDSQFVDAQKQVDTALRYGSENTYTG 242

Query: 249 KNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     IDY +        +      E      +    G   SDH  +  D
Sbjct: 243 FGYEDEGPKRIDYVLFGPKHG--VNPAWSVEGYAVVPNKFDDGVLNSDHRAVVAD 295


>gi|313496499|gb|ADR57865.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida BIRD-1]
          Length = 284

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 83/292 (28%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   + +     D D+V L
Sbjct: 28  PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHNGRAVNLQKIGRLLG--DFDLVAL 85

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE    +  +    +                  R+       +  V  +    L + +PL
Sbjct: 86  QEADGGSLRSGYVNQVEHLAHLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQLLEDHPL 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    + Q  +
Sbjct: 146 PGPAG-------RGAILVRFGEGEDALIVVMMHLALG-------------AKTRALQLGY 185

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N     L  +    + +      +              +
Sbjct: 186 IRELIGGY----RHQVLMGDMNTHATDLLEHSPL-RDLGLVAPQVEAT---------FPS 231

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++  +     ++     I              SDH P++++ 
Sbjct: 232 WRPQRCLDHILLSSSLTLERVEVLAQPI--------------SDHLPVAVEI 269


>gi|149195689|ref|ZP_01872746.1| hypothetical protein LNTAR_17393 [Lentisphaera araneosa HTCC2155]
 gi|149141151|gb|EDM29547.1| hypothetical protein LNTAR_17393 [Lentisphaera araneosa HTCC2155]
          Length = 286

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 96/320 (30%), Gaps = 53/320 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           + K++L L++  + C    A+ V+++++N+                     +    + + 
Sbjct: 1   MYKFLL-LLYVTLSC---GAESVKIITYNVLYGFNHG-------------KNIQEGQAWL 43

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           K   AD + LQEM  ++A        TW   +S      H            +A   +  
Sbjct: 44  KAQQADFIALQEMKGFDANKFAQLAKTWGHEHSYFYKRPHGMP---------LAFSSRFP 94

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
               +     G K  F +   R    +++ +  +++      L       S         
Sbjct: 95  ISEVEELH-KGVKRGFLKLKCRGIDFIVLHMTSQRLSARRQELNYISPTISELLKKKGKV 153

Query: 182 SLL----------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------ 225
            +L           +    L D + + + +        D N  I  +   +D        
Sbjct: 154 IVLGDFNSLSPRDMKHLSELDDLLEEMRNTPRKKPNLNDNNFDIGIMTAFEDLGLVELCH 213

Query: 226 KTIDPNDSLIRFPKEKDSRCNANK--NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
           + +     L             NK    +    ID+ +            S   +     
Sbjct: 214 QQLQGQKDLQGSFPSTLLEKIPNKEIQEKYLRRIDFIL--------SDAISAKNLSQAAI 265

Query: 284 DIKSRGKRLSDHCPISIDYD 303
             +   +++SDH PI I+ +
Sbjct: 266 PKEGDLEKISDHYPIIIELN 285


>gi|91776834|ref|YP_546590.1| exodeoxyribonuclease III (xth) [Methylobacillus flagellatus KT]
 gi|91710821|gb|ABE50749.1| exodeoxyribonuclease III (xth) [Methylobacillus flagellatus KT]
          Length = 257

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 79/307 (25%), Gaps = 80/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           +R++S N+N +        +                + +   ADIV LQE+ +  A   A
Sbjct: 2   LRIISLNLNGIRSAASKGFYP---------------WMQEQHADIVCLQELKAQEADMTA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  ++       +S     +       +              +G   +   + 
Sbjct: 47  EMLQPEGYYGYFHYADKKGYSGVGIYSRKKADAVI--------------VGLGMADIDSE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +E     + V+ ++L S    +  +       +      + L          
Sbjct: 93  GRY-----LEARYDNLSVVSLYLPSGSSGEERQAFKFSVMARFMPHLESL-------IRD 140

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               VI GD+N                                     +  +        
Sbjct: 141 GRDVVICGDWNIAHQEADLKNWRGNRKNSGFLPEERAWLTDLFGRVGWVDVYRLLHPDTT 200

Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +A      N+           IDY V         +  S             +  R SDH
Sbjct: 201 DACYTWWSNRGQAWAKNVGWRIDYQVATPALAARAVSASI-----------YKDARFSDH 249

Query: 296 CPISIDY 302
            P+ +DY
Sbjct: 250 APLIVDY 256


>gi|325915362|ref|ZP_08177679.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
 gi|325538409|gb|EGD10088.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
          Length = 346

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 76/297 (25%), Gaps = 72/297 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ ++N+N +                    + L ++      DIV LQE+    A  + F
Sbjct: 7   KIATYNVNGIGS----------------RLSHLLEWLTREQPDIVGLQEL---KATQEAF 47

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P+          R   +            +A+  +    ++    L              
Sbjct: 48  PE-------QAIRDAGYGVIWQGQRAWNGVALLARGTDPIEIRRGLPWDPSDTQSRYLEA 100

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           A+          + V  ++L +       +  Y  +        Q L            P
Sbjct: 101 AIH--------GVVVACLYLPNGNPQPGPKFDYKLA------WFQRLIRHAKTLVGLPHP 146

Query: 205 FVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
             + GDFN         D                 +   ++   +        D+     
Sbjct: 147 VALIGDFNVVPTDADIYDPKGWRKDALLQPESRQAYQTLVEQGWTDSLLAVYGDAPIYTF 206

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                +          ID+ ++++     L+           D      ++ SDH P
Sbjct: 207 -WDYFRQHFARDRGLRIDHLLLNRALAPGLLDAGV-------DKWVRALEKASDHAP 255


>gi|227495472|ref|ZP_03925788.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
 gi|226831019|gb|EEH63402.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
          Length = 1795

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 46/345 (13%), Positives = 91/345 (26%), Gaps = 77/345 (22%)

Query: 15   PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------------------- 53
            P   +V   V++ ++N+       G    K    +  +D                     
Sbjct: 1285 PAVPAVTGDVKVATFNVLNYFTDLGEDQVKCKSYKDRNDNPVGTDKCAVRGAYTKAAFAD 1344

Query: 54   -YTLLRQYAKNLDADIVFLQEMGSYN---------------AVAKVFPKNTWCIFYSTER 97
                +      LDADI+ L+E+ +                 A+ +     TW    S   
Sbjct: 1345 QKAKIVSAISLLDADIISLEEIENSQRFGHDRDATLEDLVAALNEKMGAGTWKAVASPAN 1404

Query: 98   LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN---RRAVELLVEING 154
            + N     + + I TA   +   V+   +S  L     +         +    +    N 
Sbjct: 1405 IPN-----NGDAIRTAFIYKPAKVKAEGESLILDHPDFTGVARSPLAQKFVPVVDERHNA 1459

Query: 155  KKIWVLDIHLKS------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
            K   ++  H KS             +     + + L  +         +   + VP  + 
Sbjct: 1460 KPFVLIVNHFKSKGSVAKGHGEQEGDFDGQGNNNPLRVKQAAALAEFAKANFAEVPTFLL 1519

Query: 209  GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
            GDFN                          ++     ++         +D+ + ++ A  
Sbjct: 1520 GDFNAYSKEDPI----------VTLGNAGFEKLTGEGHSYVFKGRSGSLDHVLANEGAKA 1569

Query: 269  FLIQESFSEILYN----------------EDDIKSRGKRLSDHCP 297
             +          N                 D  ++   R SDH P
Sbjct: 1570 LVSDTGVKVWEINAHEPVMLEYARRNYNVVDFFRADQWRSSDHNP 1614



 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/342 (13%), Positives = 83/342 (24%), Gaps = 70/342 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLW---------------------KNSVKRTTSD 53
               +V   V++ ++N+       G                           S +   + 
Sbjct: 636 ATAPAVNGDVKIATYNVLNYFVHLGKDRNCQFYTDRHGNPVSSKSCSVRGAYSQEAFDNQ 695

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRD------ 105
              +      L AD+V L+E+ +       + F         +                 
Sbjct: 696 QAKIVTAINKLGADVVGLEEVENSTKFGKDRDFALAHLVTELNKANNGAIKWAYVQSPAN 755

Query: 106 ---SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN---RRAVELLVEINGKKIWV 159
              + + I TA       V+ +  S  L  A  +         +    +  +  G    V
Sbjct: 756 VPNNGDFIRTAFIYNADKVKPVGDSQILGDASFNSIARSPLAQKFTPVVTADQTGTDFVV 815

Query: 160 LDIHLKSFCFLDSLENTYSPS--------CSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
           +  H KS    +   N                  +QA  + +W        +P  + GDF
Sbjct: 816 IVNHFKSKRPPEGDSNADQADKGDGQGGWSPKRVEQAAAVANWANTTFA-GIPVFMVGDF 874

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY---------FVM 262
           N                           +  +  ++         +D+          V 
Sbjct: 875 NSYSKEDAIIKL----------AELGFNKIPTVGHSYLFQSRVGSLDHAITNAVGMAIVA 924

Query: 263 DQNAYKFLIQESFSE-------ILYNEDDIKSRGKRLSDHCP 297
           DQ A  + I                  D   +   R SDH P
Sbjct: 925 DQTAKVWEINAHEPVALEYSRKNYTASDLYTTDEFRSSDHNP 966


>gi|85859313|ref|YP_461515.1| hypothetical protein SYN_02542 [Syntrophus aciditrophicus SB]
 gi|85722404|gb|ABC77347.1| hypothetical membrane protein [Syntrophus aciditrophicus SB]
          Length = 346

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 68/299 (22%), Gaps = 59/299 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  A  +  +R+++WNI                           +       D++  Q  
Sbjct: 89  PEPAPGSLNIRVMTWNIKY----------------DRRKAARFIREIDRCKPDVLLFQ-- 130

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                       + W                        IA R           P  G +
Sbjct: 131 ------------DAWNSMRGPLGKHMPPDWHVLTRGQYVIASRYPLSEAEVHELPFSGKR 178

Query: 135 DSFSRAGNRRA-------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                               +  +      + L         L     ++  +  +   Q
Sbjct: 179 KESFLRCRMTVGSTAISLYNVHFKTPRNSFYTLSKAKSRPWDLPEFIRSFDNNMKIRIAQ 238

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP----NDSLIRFPKEKDS 243
           A  +++++        P +++GD N     L  +      +                   
Sbjct: 239 AATIREYL---IAERGPVILSGDLNAPDASLVCSTLRGAGLRDAFAEGGRGYGHTYGHFL 295

Query: 244 RCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             N    LR   + ID+ + +                    + +    + SDH P+  D
Sbjct: 296 LKNRLPWLRFSWMRIDHIMSNAQL--------------KTRNCRVGTGKASDHRPVIAD 340


>gi|315304059|ref|ZP_07874477.1| sphingomyelin phosphodiesterase [Listeria ivanovii FSL F6-596]
 gi|313627571|gb|EFR96286.1| sphingomyelin phosphodiesterase [Listeria ivanovii FSL F6-596]
          Length = 248

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 20/213 (9%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
               ++ S N+   S      ++ N  +   +D      Y K    D+V L E    +A 
Sbjct: 42  PGNFKITSHNVYLFSRN----IYPNWGQMHRADLIAQADYMKGN--DVVILNEAFDTSAS 95

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLG 132
            ++         + T  +          + +          +AV  K   V +  +    
Sbjct: 96  HRLLNNLREMYPHQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVVSKWPIVEKSQHIFQR 155

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              +  R  N+    + +  NGK   ++  H ++    D    +   S  + ++Q Q ++
Sbjct: 156 GGGA-DRLSNKGFAYVKIMKNGKPYHIIGTHTQA----DDSSISKDTSREIRAEQMQEIQ 210

Query: 193 DWITQ-KKESLVPFVIAGDFNRKINYLGNNDDF 224
            +I            I GD N        +D  
Sbjct: 211 TFIAHKNISKEEVIFIGGDLNVNYGTDEYHDML 243


>gi|183233999|ref|XP_650532.2| exodeoxyribonuclease III [Entamoeba histolytica HM-1:IMSS]
 gi|169801308|gb|EAL45146.2| exodeoxyribonuclease III, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 319

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 90/307 (29%), Gaps = 79/307 (25%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              ++++ ++N+                    +    L ++ K  + DI+ +QE    + 
Sbjct: 66  ANDEIKIATYNV---------------ASWNAAMKKGLNEFIKEENPDILCVQETKLQDG 110

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           V  +     +  ++S           +    +   A+  K     ++   +    +    
Sbjct: 111 VNPMIDG--YHCYFSA---------STAKKGYAGTAILSK-----EEPLSITKKINGKEN 154

Query: 140 AGNRRAVELLVEINGKKIWVLDIH-LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              R      + +  +K ++++ + + S   L++L    +     + +  + L+      
Sbjct: 155 EHGRI-----ITVEYEKFYLVNSYVMNSGQRLENLVKRTTEWDKDMREHLKALQK----- 204

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKT----------------IDPNDSLIRFPKEKD 242
                  +  GD N  + ++       +                 I   + +  F  +  
Sbjct: 205 ---KKNVIWCGDLNVALRWIDVAKPMTRLRCAGFTKEERASTNETIKELNLVDTFQVKYP 261

Query: 243 SRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            + +       K         +DYF + ++    +               + +    SDH
Sbjct: 262 KKRDFYTFFSFKDKSKTAGWRLDYFFVSKDLVDSV-----------TQIYRRKEISASDH 310

Query: 296 CPISIDY 302
            P+ I  
Sbjct: 311 VPLIIHI 317


>gi|332260540|ref|XP_003279344.1| PREDICTED: deoxyribonuclease-1-like 1-like isoform 1 [Nomascus
           leucogenys]
 gi|332260542|ref|XP_003279345.1| PREDICTED: deoxyribonuclease-1-like 1-like isoform 2 [Nomascus
           leucogenys]
 gi|332260544|ref|XP_003279346.1| PREDICTED: deoxyribonuclease-1-like 1-like isoform 3 [Nomascus
           leucogenys]
          Length = 302

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 76/300 (25%), Gaps = 38/300 (12%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++   AS AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLIL---ASGAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F  +      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
                     +       R        +    +  L +        D+            
Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKDAEN---------- 156

Query: 185 SQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             +   L D   +  +       ++ GDFN     L         +           + +
Sbjct: 157 --ELNALHDVFLEVSQHWQSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGE 214

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         I   +  +     L   +  +   +    +     +SDH P+ ++ 
Sbjct: 215 DTTVRASTHCTYDRI--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVEL 272


>gi|325916353|ref|ZP_08178628.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537401|gb|EGD09122.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937]
          Length = 255

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 85/291 (29%), Gaps = 52/291 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-----DADIVFLQ 72
           AS ++ +R+++ NI   S     S +              R    ++     D DIV LQ
Sbjct: 3   ASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGAKRTSLDSIAKLAGDRDIVGLQ 62

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           E    +  +    +  +    +     +H   R       +A  +  K   +  Q + L 
Sbjct: 63  EADPGSLRSGFTNQTHYLAERAGFHYWSHQPNRRMGGVASSANGLLSKLEPLEVQDHALP 122

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           G      R G R  +          + V   HL                 +    Q  ++
Sbjct: 123 G------RIGGRGILLAKFGQGRDGLAVAVAHLSLG-------------ANSRMAQLAFI 163

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + +++   +    ++ GDFN   +       +              +      +   + 
Sbjct: 164 AELLSEHPNA----MLMGDFNCVADRPEMQALYR---------HTRLQPPSGVVHTFPSW 210

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           R    ID+ ++  +                 +  ++     SDH  + +D 
Sbjct: 211 RPDRAIDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 247


>gi|110677459|ref|YP_680466.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh
           114]
 gi|109453575|gb|ABG29780.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh
           114]
          Length = 262

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 69/305 (22%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L +WNIN                       L+ +       D++ LQE  S       
Sbjct: 3   FSLATWNIN----------------SVRLREALVLKLMTEELPDVLCLQECKS------- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +   +         H         +  +A+  K       +    G   +       
Sbjct: 40  -PVDKMPLEAFAAAGYGHV-VARGQKGYNGVAILSKIPMQEAAAEDFAGLGHARH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +E     + V + ++ +    D  +   +            ++DW   +K    
Sbjct: 93  --IAGRLENG---VTVHNFYVPAG--GDVADREVNEKFGQKLDYLTEMRDWFHAQKPEKS 145

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N         D                           +   ++        
Sbjct: 146 --ILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLAQTQDAGGWVDITRQDIPEGRLY 203

Query: 249 KNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+     +                        ++ SDH P+
Sbjct: 204 SWWSYRAADWDAADKGRRLDHVWATSDIAAAGHDS-------RILRGARGWEKPSDHAPV 256

Query: 299 SIDYD 303
              +D
Sbjct: 257 FAQFD 261


>gi|56342181|dbj|BAD73858.1| deoxyribonuclease I [Triakis scyllium]
          Length = 281

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 80/301 (26%), Gaps = 32/301 (10%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            +    + C    A  + + ++NI             +S     +   ++    +    D
Sbjct: 4   LITALTLTCLMGAASSIHISAFNIRAFG---------DSKMSHPTITNIIVNLIQRY--D 52

Query: 68  IVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           I+ +QE+   +  AV  +  K       +   + +     S+         R   V V+ 
Sbjct: 53  IILIQEVRDADLSAVKILMNKLNSASAQAFSYITSVPLGHSSYKERYLFVYRNSVVSVVD 112

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
             Y    A ++     NR    +        I    I         +             
Sbjct: 113 N-YLYSDASNTGQDTFNREPFLVKFSSPYSVIRDFVIMPMHTSPSVA------------V 159

Query: 186 QQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           ++   L D     K+       +I GD N   +Y+   D     +  +        +   
Sbjct: 160 REIDALYDVFLDAKKKLGTDNMLIMGDLNADCSYVKPTDWAHIRLRKDRQFQWLIPDSAD 219

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISID 301
                        I    +       +I  S +   +      +      +SDH P+ + 
Sbjct: 220 TSTTITTKCAYDRI--IAVGSEMKNAIIDGSAAIYNFTSVLNLNNKMTAAVSDHYPVEVR 277

Query: 302 Y 302
            
Sbjct: 278 L 278


>gi|242006795|ref|XP_002424230.1| sphingomyelin phosphodiesterase, putative [Pediculus humanus
           corporis]
 gi|212507599|gb|EEB11492.1| sphingomyelin phosphodiesterase, putative [Pediculus humanus
           corporis]
          Length = 439

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 84/300 (28%), Gaps = 41/300 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++R+ + N   L                    T + +Y  + D DIV LQE+ S     
Sbjct: 13  QQIRVFTLNCWGLPCFSKNKKC---------RITAIAEYLSSSDLDIVCLQEIWSKK--- 60

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-----DS 136
                +   I       + +S   ++  I + + +  K+       +             
Sbjct: 61  -----DYLYISKKCFLQLPYSHYFNSFIIGSGLCIFSKHPISDVYFHQWPINGYAHKIHQ 115

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 +      ++I    + V + HL +   +           S    QA     +I 
Sbjct: 116 GDWLAGKGVAFARIKIKDLVVNVYNAHLHAEYNIHGT-----EYLSHRVLQAFDTSQFIR 170

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253
              E     V+AGD N + + L          +     + +         N +       
Sbjct: 171 LTIEDCDLAVLAGDLNTEPDDLAIKILNQNAQLTDCYFVAQKKTLTFFGTNESTRNSYAP 230

Query: 254 ---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       IDY +   +    +  +++       + +       SDH  + +   +
Sbjct: 231 KSEVKRLPQGKRIDYILYRNSRKINVEVQNYQ--FPLPEKVPGCTHSYSDHEGVEVLLQY 288


>gi|149376400|ref|ZP_01894162.1| Metal-dependent hydrolase [Marinobacter algicola DG893]
 gi|149359241|gb|EDM47703.1| Metal-dependent hydrolase [Marinobacter algicola DG893]
          Length = 286

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 82/287 (28%), Gaps = 56/287 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGS 76
           +RL+++NI           +     +          +   +     N   D+V LQE   
Sbjct: 38  IRLLTFNIQVGINTSSYRHYFTRSWQHFLPHRNRIQNLDRIATLLSNY--DVVALQECDG 95

Query: 77  YNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +  +    +  +    S          R+       +  +  +   +  + + L G   
Sbjct: 96  GSLRSGYINQVQYLAEASGIPYWYQQLNRNLGQLAQHSNGLLSRYRPLDVKEHRLPGL-- 153

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A+          + ++ +HL                    + Q + L  +I
Sbjct: 154 ----IPGRGAIIARYGAEEDPLVLVMMHLSL----------------SKAAQQRQLA-YI 192

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                     V+ GD N     L +N      +  ++ +           ++  + R + 
Sbjct: 193 QALISEYQHVVLMGDLNNHAEELLSNTP----LKHSNLVPLPE-----TAHSFPSWRPER 243

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D+ ++  +      +                   +SDH PI++D 
Sbjct: 244 ALDHILVSPSLEIRRSEVV--------------SYPVSDHLPIAMDI 276


>gi|229028217|ref|ZP_04184357.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
 gi|228733091|gb|EEL83933.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
          Length = 263

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 79/269 (29%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  D D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGHKKKDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAILTKHNVIKEDTFFVSENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + + +         + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVNR----DELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +              ++ + ID  + +Q+      +  
Sbjct: 183 EGYEYMMQKGLYDTYELAAEKDEGTTVQGEIAGWDKNKHNLRIDLILCNQSEKVRSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F++   N          +SDH  + +  D
Sbjct: 243 FNDTNRNV---------ISDHFGVEVQVD 262


>gi|167004926|ref|ZP_02270684.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 252

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 1   MKLLSWNVNGLRAICDKNA---------------LDWIAQEKIDFIGFQEI---KAHEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 43  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +        L            
Sbjct: 91  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|332703367|ref|ZP_08423455.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553516|gb|EGJ50560.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 236

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 79/285 (27%), Gaps = 55/285 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               +++   ++NI+     +G             + + + +    LD DI+ LQE+   
Sbjct: 4   TGAQRRLTAATYNIHAWVGTDG-----------QWNPSRVLEIMHALDVDILALQEVDFL 52

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +      +                 R ++        +  +   +      L     + 
Sbjct: 53  WSEGATAEEVLCREMGCQVLPGPTMVRGTS---RYGNMLLTRLPVLSYDQRDL-----AV 104

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  ++ L++ +G  + VL  HL                 +    Q + L   +  
Sbjct: 105 DGREPRCCIDALLDADGTSVRVLATHLGLK-------------RNERICQVRSLLAALD- 150

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            ++   P ++ GDFN           FW  +    + +    +           R  + +
Sbjct: 151 -EDGEYPTILLGDFN-----------FWMPLFGASARLTHRVKASPLTRTFPANRPLLAL 198

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +        +                  +  SDH P+  + 
Sbjct: 199 DRIYLSDGMRFGRVGS----------LDTPATRLASDHLPLRAEI 233


>gi|307707550|ref|ZP_07644032.1| exodeoxyribonuclease III [Streptococcus mitis NCTC 12261]
 gi|307616502|gb|EFN95693.1| exodeoxyribonuclease III [Streptococcus mitis NCTC 12261]
          Length = 275

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSTRAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILEELFPDYENKWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDKFFVTQVYTPNTGDGLKRLEERQIWDVKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GD+N               R   +       +  +        F           
Sbjct: 161 PVLASGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIE 274


>gi|302823174|ref|XP_002993241.1| hypothetical protein SELMODRAFT_187330 [Selaginella moellendorffii]
 gi|300138911|gb|EFJ05662.1| hypothetical protein SELMODRAFT_187330 [Selaginella moellendorffii]
          Length = 351

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 89/343 (25%), Gaps = 91/343 (26%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------ 74
           A   R +SWN N+L            + R  ++   +  + +  D D++ +QE+      
Sbjct: 30  ADPSRFMSWNANSL------------LLRFKNNREEVMSFIRGFDPDVICIQEVRLPAAG 77

Query: 75  -----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---N 120
                         +A A+   +    +   +             + +   A+  K    
Sbjct: 78  FKGEKKNPGEIKDDSAAARNDKQAVMRVLSVSPMADYSVWWSLGENKYAGTALFVKNCFK 137

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              +  +    G          R  +            +L+ +  +     +        
Sbjct: 138 PVSVAFNIDNKGKDAQRHEIDGRIILA-----EFGSFTLLNTYAPN-----NGWKEEENG 187

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------------------- 219
                   + + ++++   +   P +  GD N     +                      
Sbjct: 188 FVRRRAWDKKVLEFVSSCSK---PLIWCGDLNVSHQEIDVTHPEFFANATQPGYTPPNKE 244

Query: 220 ----------NNDDFWKTIDPNDSLIRFPK----------EKDSRCNANKNLRNKIPIDY 259
                         F   ++  + +  +               S     K    ++ IDY
Sbjct: 245 DAGQPGFTLNERARFSAILNRGNLVDTYRHLHEKQDLEAGFTWSGNPVGKYRGKRMRIDY 304

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           F++ +     L            +     G   SDHCP++++ 
Sbjct: 305 FLISKALLPRLASSKIHGRGIELE-----GFLGSDHCPLTMEL 342


>gi|294658205|ref|XP_460546.2| DEHA2F04136p [Debaryomyces hansenii CBS767]
 gi|218511980|sp|Q6BMM5|CCR4_DEBHA RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|202952956|emb|CAG88862.2| DEHA2F04136p [Debaryomyces hansenii]
          Length = 831

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 81/321 (25%), Gaps = 42/321 (13%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++S+N      +  +      +           L++   +  +D+V +QE+ +     
Sbjct: 482 FTMMSYNTLCQHYATTKMYKYTPSWALEWGFRRAALQEEVLHFKSDLVCMQEVETRTFHE 541

Query: 82  KVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--------- 128
              P      +    ++  R    S+ DS      A   +     +L +           
Sbjct: 542 FWVPVMQGFGYKGVFFNKTRSKTMSESDSKKVDGCATFYKTDKFELLHKQNFEYNSVCMG 601

Query: 129 --PLLGAKDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKSFC-FLDSLENTYSPSC 181
                  KD F+R  N+              G+KI  ++ HL     F D          
Sbjct: 602 SDKYKKTKDLFNRFMNKDNIALITYFNHIQTGEKILFVNTHLHWDPAFNDVKTLQVGILL 661

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------------NYLGNNDDFWK 226
             L    +      +  +      VI GDFN                  +      D+ K
Sbjct: 662 EELRTIMKKYHHTNSIDEIKNASMVICGDFNSTKENAVYQLFSTGAVSNHEDLEGRDYGK 721

Query: 227 TIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYN 281
             D         K              +      IDY            +     E   +
Sbjct: 722 FTDEGFRHSFKLKSAYDHVGELPFTTISPAFTDAIDYIWYSTPTLQVKGLLGKIDEEYSS 781

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                      SDH P+   +
Sbjct: 782 HCIGFPNAHFPSDHIPLVTKF 802


>gi|322821240|gb|EFZ27618.1| MP99, putative [Trypanosoma cruzi]
          Length = 915

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 95/314 (30%), Gaps = 41/314 (13%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLDADIV 69
           ++P        +R+++WN+   +   G             T + Y  L +  + LDAD++
Sbjct: 616 VLPTPTEELSTLRVLTWNVQ-FNRHSGERTPLGRDGIDWCTPTRYIALAKTMETLDADVI 674

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            +QE+              WC +   ++ +      S N+     A+R   V +L + + 
Sbjct: 675 SMQEVE-----------PAWCKYLCEQQWVRERYALSCNEDSH--AIRPWGVMLLVKRHL 721

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            +      + A       +   +    I V      +   L  L      + S  + Q +
Sbjct: 722 RVEGMHHANVAAFAGHTSV---MPEVTITVSKNVPVTIGSLHLLAPYNKNNVSNRTTQLE 778

Query: 190 WLKDWITQKKESLVP---FVIAGDFNRKINYLGN------NDDFWKTIDPNDSL---IRF 237
            L   +  +  +       ++ GDFN   N            D W  ++P ++       
Sbjct: 779 NLTKRMRARPSAGGVPTGAIVMGDFNDYANNYFTFPPELGFKDAWSLLNPENNKNEGYTI 838

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE---------DDIKSR 288
             +++               D  +      + +  E                  D     
Sbjct: 839 DGDRNPYAGQIIEREFFGRADRVLFASRHLQPIHAEIVGTTSVRALGITKQVNCDKAVPE 898

Query: 289 GKRLSDHCPISIDY 302
               SDH  + +++
Sbjct: 899 YLYPSDHFGLLVEF 912


>gi|229824704|ref|ZP_04450773.1| hypothetical protein GCWU000182_00052 [Abiotrophia defectiva ATCC
           49176]
 gi|229791033|gb|EEP27147.1| hypothetical protein GCWU000182_00052 [Abiotrophia defectiva ATCC
           49176]
          Length = 250

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 68/304 (22%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                         +   +DAD   LQE+         
Sbjct: 1   MKYISWNVNGLRACLTKGFM---------------DFFNKVDADAFGLQEIKLSEG-QLE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +          +  A+  K   +       +   D   R    
Sbjct: 45  LDLPGYHKYWNYAEKKGY----------SGTALFTKKEPINVTYDMGIDEHDHEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  E       V                                + ++ +  +   
Sbjct: 91  ---VITAEYEDHFFVVCYTPNA---------KQELERLDYRMVWEDDFRAYLNK-LKESK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                              +     +  F        N  
Sbjct: 138 PVILCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKMTELLDAGYIDTFRFFYPELENVY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+   +    L        +             SDHCP+ 
Sbjct: 198 SWWSYRFKAREKNTGWRIDYFITSDDFKDRLKDAKIHSEIL-----------GSDHCPVE 246

Query: 300 IDYD 303
           +D+D
Sbjct: 247 LDFD 250


>gi|171742567|ref|ZP_02918374.1| hypothetical protein BIFDEN_01680 [Bifidobacterium dentium ATCC
           27678]
 gi|306822478|ref|ZP_07455856.1| exodeoxyribonuclease III [Bifidobacterium dentium ATCC 27679]
 gi|309801420|ref|ZP_07695547.1| putative exodeoxyribonuclease III [Bifidobacterium dentium
           JCVIHMP022]
 gi|171278181|gb|EDT45842.1| hypothetical protein BIFDEN_01680 [Bifidobacterium dentium ATCC
           27678]
 gi|304554023|gb|EFM41932.1| exodeoxyribonuclease III [Bifidobacterium dentium ATCC 27679]
 gi|308221935|gb|EFO78220.1| putative exodeoxyribonuclease III [Bifidobacterium dentium
           JCVIHMP022]
          Length = 286

 Score = 75.7 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 78/311 (25%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81
            + + + N+N +                 +    +  +A     DI  +QE+ +    + 
Sbjct: 2   TISITTSNVNGIRA---------------AKRKGIEIWAGRNTPDIWCMQEVRAPQHEID 46

Query: 82  KVFPKNTWCI----FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +        + +  ++             + +      + ++        D  
Sbjct: 47  PIFDEFGFEYSTAGKIADQSELDRLNEVCRIKGRAGVGLLSALPVIDKRYGLPGLDDDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S    R     +    G  + V+ +++ +    D            L    + +     +
Sbjct: 107 S---GRWIEADVKTPQGYIVTVVCVYVHAGNTDD--PAKMEQKYRFLDTMLERMGQLRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +   + +       
Sbjct: 162 AAHGGRQSVLCGDFNIAHTPLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRNLA 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +           +  D   +  KR 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAESACG-------FVIDKAPTYDKRW 274

Query: 293 SDHCPISIDYD 303
           SDH P++I YD
Sbjct: 275 SDHAPLTITYD 285


>gi|312371109|gb|EFR19370.1| hypothetical protein AND_22625 [Anopheles darlingi]
          Length = 533

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 89/318 (27%), Gaps = 47/318 (14%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           +    ++  ADI+ LQE+ +     
Sbjct: 163 FTVMCYNVLCDKYATRQMYGYCPSWALSWEYRKKAILDEIRHYSADIISLQEVETDQFFN 222

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131
              P+     +       + +K  S  D       AI  R     ++++           
Sbjct: 223 FFKPELKNDGYEGIFSPKSRAKTMSEADRKYVDGCAIFFRSSKFSLIKEHLVEFNQLAMA 282

Query: 132 ---GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHL----KSFCFLDSLENTYSPSCS 182
              G+ +  +R   +    +  L+++       +        +      +  +     C 
Sbjct: 283 NAEGSDNMLNRVMPKDNIGLAALLKVKEGAWESVSPEAAQISQPLLVCTAHIHWDPEFCD 342

Query: 183 LLSQQAQWLKDWITQKKES--------------LVPFVIAGDFNRKINYLGNNDDFWKTI 228
           +   Q   L + I    +                V  V+ GDFN   +            
Sbjct: 343 VKLIQTMMLSNEIKTILDEAGLSFRPGHKFDVNNVQLVLCGDFNSLPDSGVIE------F 396

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDI 285
                +    ++       +   R    IDY    +        L   S   +  N+   
Sbjct: 397 LSAGRVSMDHQDFKELGYKSCLQR---IIDYIFYSKQGMVPLGLLGPISSDWLRENKVVG 453

Query: 286 KSRGKRLSDHCPISIDYD 303
                  SDH P+ ++ +
Sbjct: 454 CPHPHIPSDHFPLLVELE 471


>gi|291303122|ref|YP_003514400.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572342|gb|ADD45307.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 310

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 82/299 (27%), Gaps = 34/299 (11%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            A  A ++ ++SWN       ++              +   ++       D D++ LQE+
Sbjct: 25  VADEATELNVLSWNTCGEAGGKRGDAGFCPYRDD-PQAKVDVIADLVAERDLDVILLQEV 83

Query: 75  GSYNA------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
            +  A      +      +         R    +    + +    +A+  K       S 
Sbjct: 84  CAETADSHLGRLKTALGDDWQIGNARGARPDGRTDCRGDLNGELGVAIAIKASNAEFTSK 143

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
             L    +         +            V   H+ +                   QQ 
Sbjct: 144 QTLPPDPTGQSKQTLPTLCAT--TTDWPTTVCTTHILADPEDP-----------RRPQQV 190

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + ++D++     S    V+ GDFN                + +        + D   +  
Sbjct: 191 KNVRDYV---WPSRANLVLGGDFNLFPGSSTLKPISDNFHECDGRSYGSGDKVDETTHHA 247

Query: 249 KNLR----NKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRG--KRLSDHCPIS 299
                    +   D+    +  +   F   +S ++++   ++    G     SDH P+ 
Sbjct: 248 WTGDDTHVYRKR-DHIFASKPDSGTNFGSCDSRTDLMDTTENEPDSGPPSGYSDHAPLL 305


>gi|89889637|ref|ZP_01201148.1| exodeoxyribonuclease III [Flavobacteria bacterium BBFL7]
 gi|89517910|gb|EAS20566.1| exodeoxyribonuclease III [Flavobacteria bacterium BBFL7]
          Length = 253

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/303 (9%), Positives = 85/303 (28%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                         + K  + D++ LQE+ +       
Sbjct: 1   MKIISYNVNGIRAAMKKDFIT---------------WLKAANPDVLCLQEIKATEDQVD- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +            +    ++ +A+  K        +   G          R
Sbjct: 45  ------TEAFKEAGYAYQYYYSAQKKGYSGVAIISKTKP----DHVEYGTGIESMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + ++   + ++ ++L S    D          S   +  +   ++  + ++   
Sbjct: 95  N-----LRVDFGDVSIMSMYLPSGTNDD--------RLSFKFKYMEEFLEYSKELRKERP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +  ++                W         I   +  + + +   
Sbjct: 142 NLIVCGDYNICHKAIDIHNPKGLKSTSGFLPEEREWMDRFVASGFIDTFRMFNDQPDQYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DY +  +     + +    +   +           SDHCP+ +
Sbjct: 202 WWSYRGGSRARNKGWRLDYHMATEQMTDRIKRAVILQSAVH-----------SDHCPVVV 250

Query: 301 DYD 303
           + D
Sbjct: 251 EID 253


>gi|21242774|ref|NP_642356.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108255|gb|AAM36892.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 330

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 75/297 (25%), Gaps = 72/297 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ ++N+N ++                     L ++ +    DIV LQE+ S        
Sbjct: 7   KIATFNVNGIAS----------------RLPHLLEWLQRDQPDIVGLQELKSTQVA---- 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKDSFSRAGNR 143
                       R   +            +A+  +    V  +       +D+ SR    
Sbjct: 47  ------FPEQAIRDAGYGVIWQGEKSWNGVALLARGIEPVEIRRGLPWDPRDTQSRY--- 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V  ++L +       +  Y  +        + L        +   
Sbjct: 98  ------LEAAIHGVVVACLYLPNGNPQPGPKFDYKLA------WFERLIRHAKTLVDLPH 145

Query: 204 PFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P  + GDFN         D                 ++T+                    
Sbjct: 146 PVALIGDFNVVPTDADIYDPKGWRKDALLQPESRAAYQTLLAQGWTDSLLAIHGQTPIYT 205

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                +          ID+ ++++     L            D      ++ SDH P
Sbjct: 206 FWDYFRQHFARDRGLRIDHLLLNRTLAPGLQDAGV-------DKWVRALEKASDHAP 255


>gi|330828556|ref|YP_004391508.1| putative extracellular nuclease [Aeromonas veronii B565]
 gi|328803692|gb|AEB48891.1| Predicted extracellular nuclease [Aeromonas veronii B565]
          Length = 729

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/372 (11%), Positives = 90/372 (24%), Gaps = 89/372 (23%)

Query: 20  VAQKVRLVSWNINTLSEQEGV---------------------SLWKNSVKRTTSDYTLLR 58
               +R+ S+N+                              +    S        T + 
Sbjct: 324 AGSDLRIGSFNVLNYFTSHSSIGGALNILCKDQADADNAKGCNRGAKSQPEFEKQRTKII 383

Query: 59  QYAKNLDADIVFLQEMGSY-----NAVAKVF---------PKNTWCIFYSTERLINHSKR 104
                +DAD++ L EM +      +A+  +              +         +   K 
Sbjct: 384 NAITAMDADLLGLMEMENNGFEDNSALHNLVTRLNEQQKDASKHYAYVRLPVTALTDGKF 443

Query: 105 DSNNDIHTAIAVR------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156
              + I  A+  R        +  V++              AG R ++     +  + + 
Sbjct: 444 FGGDAIMVAMLYRPALLTPSGDASVIKLPEQRYTTGGVAKTAGQRDSLVQTFTLAKSKEP 503

Query: 157 IWVLDIHLKSFCFLDSLENTYS--------PSCSLLSQQAQWLKDWITQ----------- 197
           + ++  HLKS                             A+ L + +++           
Sbjct: 504 LTLVVNHLKSKGSGCYENGDGKTEPADLQGKCTEFRVSAAKVLGEAVSKLPGQVLLVGDF 563

Query: 198 -KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------------DSLIRFPKEKDS 243
                  P  +  D+N   +           I  +               +    K    
Sbjct: 564 NSYAKEDPIRVLTDYNPATSERKIVSASHTFIGDHSYEQLGREVTRSYGLIDLNVKFNKE 623

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------------ 291
           +  +         +DY + +      +   +   I   E  +   G +            
Sbjct: 624 KAISYSYDGELGTLDYALANPALASKVAGVADWHINSFESSLFEYGSQYTGSLLKSDNPF 683

Query: 292 -LSDHCPISIDY 302
             SDH PI +D 
Sbjct: 684 SASDHDPIIVDL 695


>gi|299141550|ref|ZP_07034686.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735]
 gi|298576886|gb|EFI48756.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735]
          Length = 340

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/344 (10%), Positives = 92/344 (26%), Gaps = 63/344 (18%)

Query: 9   LVFFLVPCTASVAQKVRL---VSWNINTLSEQEGVSLWKN-----------SVKRTTSDY 54
           +V   V    S  +K  +     +N   L +    +  ++              + +   
Sbjct: 1   MVALFVCLATSAQKKFSVYAVGFYNQENLFDTCHDAGKRDYDFLPTGSYRWDGLKYSHKL 60

Query: 55  TLLRQYAKNLDADI--------VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
             + +   ++  D+        + L E+ +   +  +  +       +      H +   
Sbjct: 61  HNMARALADMGTDVLPNVGCAVIGLSEVENRKTLEDLTAQPELK---ARNYQFAHIEGPD 117

Query: 107 NNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
              I  A+        +  ++  P   + +  +    R  + +  ++  + +  +  HL 
Sbjct: 118 KRGIDCALIYNPSLFTMESETLVPYRNSTEQDTSFVTRGFLTVTGKLANEPVAFIVCHLP 177

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
           S     S     +        QA+ +KD +       +   + GD N         +   
Sbjct: 178 SRFSGPSYREWGAL-------QAKAVKDSL-LVLNPQMKVFVMGDMNDDPTDKSMYEALS 229

Query: 226 KTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                      +     +   K                D  VM  N      + +F+ + 
Sbjct: 230 AKESIEKVGPDDMYNPWYNILKKQGKGTLMYRGTWNLFDQIVMTPNLLNKKGENNFTTLK 289

Query: 280 YNEDDIKSRGK-----------------------RLSDHCPISI 300
           + ++ I+                             SDH P+ +
Sbjct: 290 FWKNQIQRMPYLFQSEGQYKGSPKRTTAGGVWLDGFSDHLPVCV 333


>gi|227547870|ref|ZP_03977919.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum
           DSM 44291]
 gi|227080055|gb|EEI18018.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 259

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 78/294 (26%), Gaps = 59/294 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N                   S    +  + +  D D++ +QE  +  A    
Sbjct: 1   MRIATFNVN----------------SVRSRAERIVAFLERNDVDVLAMQETKTSEA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y+      +       +    +A+  +      +           +  G+ 
Sbjct: 41  ------KFPYAVFEAAGYEVAHVGTNQWNGVALASRVGLEDVR----TQFDHQPAYEGSV 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-----SLLSQQAQWLKDWITQK 198
            A  +     G  + V  +++ +   +      Y           ++ Q   L       
Sbjct: 91  EARAVGATCGG--VEVWSLYVPNGREIGHPHYDYKLQFLYSLQHEVAAQTPQLFTGDFNI 148

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---- 254
                       F  K +        ++ +     +     +             K    
Sbjct: 149 APRDSSVWDIAWFEGKTHVTEPERAAFEMLLEAGLVEIRHDDA------YSFWDYKAMRF 202

Query: 255 -----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                + ID+ +        L++          D  + RGK  SDH P+  D+D
Sbjct: 203 QKNQGMLIDFLLATPPLAGKLVKAWV-------DVDERRGKGASDHAPVIADFD 249


>gi|226508522|ref|NP_001147019.1| CCR4-NOT transcription complex subunit 6 [Zea mays]
 gi|195606510|gb|ACG25085.1| CCR4-NOT transcription complex subunit 6 [Zea mays]
          Length = 620

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 98/360 (27%), Gaps = 65/360 (18%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           A+V F +    S      ++S+NI  +T +  +  S               L +      
Sbjct: 253 AMVHFDLDSRTSSFGTFTVLSYNILADTYATSDTYSYCPTWALTWAYRRQNLLREIIGYH 312

Query: 66  ADIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           ADI+ LQE+ S    +  +    K+ +   Y       +S      D       R +   
Sbjct: 313 ADIICLQEVQSNHFEDFFSPELDKHGYQPLYKKRTTEVYSGSPQAIDGCATFFRRDRFSH 372

Query: 123 VLQQSYPLLGAKDSFSR-----AGNRRAVELLVEINGKKIWVLDIHLKS----------- 166
           V +       A  S +      A  + A+  LV+ N   I VL+    +           
Sbjct: 373 VKKYEVEFNKAAQSLTDAIIPAAQKKLALNRLVKDNIALIAVLEAKFSNHGTENPSKRQL 432

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNN---- 221
            C  ++  N +     +   Q   L   + +    + +P ++ GDFN       +     
Sbjct: 433 LCVANTHINIHHDLKDVKLWQIHTLLKGLEKIAVSADIPMLVCGDFNSTPGSTSHGLLAR 492

Query: 222 --------------------------------------DDFWKTIDPNDSLIRFPKEKDS 243
                                                        D +    R     + 
Sbjct: 493 GKVDHLHPDLAIDPLGILRPLSKLTHQLPLVSAYSSFVSMAGVGYDLDHQRRRMDPGTNE 552

Query: 244 RCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N        +DY      +     + E   E    +D      +  SDH  +  ++
Sbjct: 553 PLFTNCTRDFTGTLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 612


>gi|257076437|ref|ZP_05570798.1| exodeoxyribonuclease III [Ferroplasma acidarmanus fer1]
          Length = 252

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 82/304 (26%), Gaps = 79/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++++SWN+N +                      + +  +N + DI+ LQE       + +
Sbjct: 1   MKILSWNVNGIRAAVKNG---------------IIKTLENENPDIILLQEAKADKMDIPE 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 + I+ +      +S   +                      PL     +     +
Sbjct: 46  ELHHTGYKIYVNPADKKGYSGTMAMAKQE-----------------PLSYTTGTGENNKD 88

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +E +    ++++ +  +     +  +        + +    L        ++ 
Sbjct: 89  VEGRIQTLEYDN--FYLINSYFPNSQHGLTRLDYKIQFNREILEYMDKL--------KAK 138

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +I GDFN     +                   D    I  +  +  +        + 
Sbjct: 139 KPVIITGDFNVAHEEIDIARPKGNEKNAGFTIEERDSMTEILSHGYVDTYRYFHKEPGH- 197

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYF++  N    +           ED +       SDH P+
Sbjct: 198 YSWWSYRFNAREKNIGWRIDYFLVSDNFIGKV-----------EDSLILENVTGSDHAPL 246

Query: 299 SIDY 302
            +  
Sbjct: 247 ELIL 250


>gi|319954545|ref|YP_004165812.1| exodeoxyribonuclease iii xth [Cellulophaga algicola DSM 14237]
 gi|319423205|gb|ADV50314.1| exodeoxyribonuclease III Xth [Cellulophaga algicola DSM 14237]
          Length = 254

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 79/302 (26%), Gaps = 75/302 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           +VSWN+N +        +               +  K +  DI+ LQE  + ++      
Sbjct: 3   IVSWNVNGIRAAVKKDFF---------------EAVKTMAPDILCLQETKAQDSEVAKAL 47

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           ++      ++          ++   ++  A+  K   +       +   D+  R      
Sbjct: 48  ESLSNFSLNSN--------SADKKGYSGTAILSKQAPISATPNMGIEVHDTEGRI----- 94

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               +       +++++++ +                      + L+           P 
Sbjct: 95  ----LCTEYDSFYLVNVYVPNSGQKLDRLEYRQQWDKDFLAYLKNLEK--------KKPV 142

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPND---------------SLIRFPKEKDSRCNANKN 250
           +  GDFN     +   +D                          +   +       A   
Sbjct: 143 IACGDFNVAHQAIDLKNDKANYNKTAGYTQIEIDGMDNFIANDFVDSFRALHPDEVAYTF 202

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           IDYF++ +     + + +                  SDHCPI I 
Sbjct: 203 WSYRFKSRERNTGWRIDYFLVSKAIADKIKKVTI-----------YADIMGSDHCPIGIT 251

Query: 302 YD 303
             
Sbjct: 252 LS 253


>gi|310800439|gb|EFQ35332.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 441

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 93/302 (30%), Gaps = 39/302 (12%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               + +  + ++S N+  L                T++   +       + DI+ +QE 
Sbjct: 19  ALAQATSGDLTILSMNVAGLP---QFLQNNEVPGDKTTNSKTIGTLFSAYNYDIINVQED 75

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +Y+A         +       R          + ++T        V   +  +      
Sbjct: 76  FNYHA-------YIYQTDRHAYRTATSGGVPFGSGLNT--LSNYNWVDFERVKWNTCSDA 126

Query: 135 DSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            S      +    + V ++ G  + V+++H  +           S          + + D
Sbjct: 127 SSNDCLTPKGFTFMRVRLDEGVYVDVINLHTDAGTEAGDSVARNSN--------LKQVAD 178

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNND-----------DFWKTIDPNDSLIRFPKEKD 242
           +I     +    +I GD N +   L  +D           D W  +  +  +        
Sbjct: 179 YIDAN-SAGNAVLIFGDTNSRYTRLTPDDIGIFGTQNGMTDSWVQLVRDGVVPTAETL-- 235

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             C+          +D      +    L   +++    +E  ++  G  LSDH PI++++
Sbjct: 236 --CDNPSTTSYCETVDKNFYRGSPVLNLEATAWN--YASEKFLQPDGNILSDHNPIAVNF 291

Query: 303 DF 304
            +
Sbjct: 292 TW 293


>gi|302679254|ref|XP_003029309.1| hypothetical protein SCHCODRAFT_58593 [Schizophyllum commune H4-8]
 gi|300102999|gb|EFI94406.1| hypothetical protein SCHCODRAFT_58593 [Schizophyllum commune H4-8]
          Length = 645

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/343 (10%), Positives = 80/343 (23%), Gaps = 61/343 (17%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           A+   ++ +NI  +  + ++      +          L+ +      A+ V LQE+    
Sbjct: 296 AETFSVLCYNILCDKYATEKLYGYTPSWALAWDYRKELILKELVAHQAEFVCLQEIDVGQ 355

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAK 134
                        + +       ++     +  T    A   R    +++++    L A 
Sbjct: 356 FEDYFLKHMMEHGYEAVFWPKPRARTMGEAERRTVDGCATFYRSDRFKLVEKHLVELSAV 415

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHL-----KSFCFLDSLENTYSPSCSLLSQQAQ 189
                   +  +      N + I V+           F   ++     +  C +   Q  
Sbjct: 416 AMQRSDFIKTDIMFNRLFNKEYIAVVCCFEDRSTGTRFIVANAHMFWNADFCDVKLVQVG 475

Query: 190 WLKDWITQKK-----------------------ESLVPFVIAGDFNRKINYLGNNDDFWK 226
            L D + +                          + +P ++ GD+N              
Sbjct: 476 MLMDELEKIAHAFARYPPPLKTESGQPPPSYSDGTKIPTIVCGDYNSVPRSGVYEYLSAG 535

Query: 227 TIDPNDSLIRFPKEKDSRCN--------------------------ANKNLRNKIPIDYF 260
           ++ P+                                          N     +  IDY 
Sbjct: 536 SLPPDHPDFLGHSYGRYTEEGMRHRFGLRSAYALPGPGPGAELLPMTNYTPSFQGVIDYI 595

Query: 261 VMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      +          +          SDH  I   +
Sbjct: 596 WYSAPTVAVQKVLGEVDRSYLEKVVGFPNAHFPSDHLAILAQF 638


>gi|328708594|ref|XP_001942566.2| PREDICTED: 2',5'-phosphodiesterase 12-like [Acyrthosiphon pisum]
          Length = 569

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 80/318 (25%), Gaps = 37/318 (11%)

Query: 22  QKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +R+V++N+          ++          +  ++  + L+ +  +  + DI+ LQE+
Sbjct: 249 NSIRVVTYNLLAGEYTKTKEAKTVMYPYCPEKILASSYRHPLILRELQTYNGDIICLQEV 308

Query: 75  GSYNAVAKVFPKNTWC-----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             +    ++ P          +F+      N       +     +  +         +  
Sbjct: 309 DKHFFHRELCPILKKFKGMNGLFFKKNGRRNEGLSCFYSPEKFNLLEQFDISLNNPTTVE 368

Query: 130 LLGAK-------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYS 178
           L           D   + G  +     V     I+ KK   L  +       D       
Sbjct: 369 LYCGPIVKDIMDDEIWKQGLEKKTVFQVLAFELISDKKQLFLVCNTHLISDPDGDFIRLF 428

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-----------LGNNDD--FW 225
            +   L    +  ++         V  +  GDFN                   +      
Sbjct: 429 QALIELIIINKIKQNINKDYLGRNVSVIFCGDFNSTPESGVYDLATKLTLPEEHRTVKIL 488

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL-IQESFSEILYNEDD 284
             +  N               +N        +DY        + + +    S     +  
Sbjct: 489 NDLKNNLEFKMESAYNTDVLYSNYTKTFSGLLDYIYFTNQHLELIQVLSMPSHDDVIQHG 548

Query: 285 IKSRGKRLSDHCPISIDY 302
                   SDH  +  D 
Sbjct: 549 GIPSLLFPSDHLALIADL 566


>gi|315925763|ref|ZP_07921970.1| exodeoxyribonuclease III [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315620872|gb|EFV00846.1| exodeoxyribonuclease III [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 254

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 70/305 (22%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           ++L SWN+N +   E                     + +    D++ +QE+         
Sbjct: 1   MKLYSWNVNGIRAAEKKGF---------------VDWLQREQPDVLGIQELKAEPDQLSD 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     + +F++      +S                           L G  D      
Sbjct: 46  ALKDVEGYHVFFNPAERKGYSGTAVYYKREPKRI--------------LTGLSDERFNHE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      + +      + +I+  +    D                       + ++   
Sbjct: 92  GR-----TIILEYPDFTLYNIYFPNGSQSDERLQFKMDFYDGFWH-------DVDERVAR 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCN-------A 247
               +I GD N     +   +            I+       F                 
Sbjct: 140 GEKVIICGDVNTAHREIDLKNPKSNAKRSGFLPIEREWMDHFFAGGYIDTYRYFYPEQVT 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYF    NA   L   +                  SDHCPI
Sbjct: 200 YSWWSYRFNARKNNAGWRIDYFFASDNAKDLLADAAIHT-----------DVTGSDHCPI 248

Query: 299 SIDYD 303
           S+  +
Sbjct: 249 SLTLN 253


>gi|47213945|emb|CAF94476.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 320

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 77/300 (25%), Gaps = 73/300 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ SWN++ L                         + +  + D++ LQE           
Sbjct: 66  KITSWNVDGLRAWVKKKG---------------LDWVREENPDVLCLQETKCAE------ 104

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                 I    E    +     + + ++ +A+  K   V        G          R 
Sbjct: 105 KSLPADITSMPEYPYKYWAGSDDKEGYSGVAMLCKTEPVKVT----YGIGKEEHDKEGR- 159

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++       +++  ++ +        +      +        L        +   P
Sbjct: 160 ----VITAEFPGFFLVTAYVPNSGRGLVRLDYRKTWDADFRTYLSEL--------DVQKP 207

Query: 205 FVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            V+ GD N     +                   + +  +     +  F +    + +A  
Sbjct: 208 VVLCGDLNVAHQEIDLKNPKGNKKNAGFTAEEREGFGQLLEAGFVDSFRELYPEQSHAYS 267

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +DYFV+  +    L        +           + SDHCPI++
Sbjct: 268 FWTYMMNARDKNVGWRLDYFVLSSSLLPGLCDSKIRNQV-----------KGSDHCPITL 316


>gi|291515610|emb|CBK64820.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 380

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 83/294 (28%), Gaps = 43/294 (14%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           TA     V+++S+N+ +   ++G S   +           + +  +    D++ LQE  +
Sbjct: 118 TAFDRAAVKVMSYNVRSFYGEDGRSSVDD-----------ILRLIEEQAPDLICLQEFNA 166

Query: 77  YNAVA----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LL 131
             A       +  +      +   +  +     +   +     +R   V     S    +
Sbjct: 167 RLAEQSEEFSLLGEKYEIAHFGRTQAPDSVYGSTLTILSKYRILRSDTVLTPSSSVWADV 226

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD---SLENTYSPSCSLLSQQA 188
              +   R  N       +  +  +       L          S+      +  L + Q 
Sbjct: 227 IVGEDTVRVFNNHLRSTAINASDNQFITSHQFLSDTARETKIRSIVTRLRENSVLRAAQV 286

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +   +   +      ++ GDFN             + +        F +      +  
Sbjct: 287 DSIAQVVGATRTRR---IVCGDFNDTP-MSYVYRTMARGLRD-----AFRECGSGYSHTF 337

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   N + IDY +            S+  +  +           SDH P+ +  
Sbjct: 338 RGFYNTLRIDYVLSGG-----FEPLSYEVLPVD----------YSDHHPVVVRL 376


>gi|194216325|ref|XP_001504052.2| PREDICTED: similar to sphingomyelin phosphodiesterase 2, neutral
           membrane [Equus caballus]
          Length = 560

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 77/306 (25%), Gaps = 38/306 (12%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
              P   + + ++R+ S N   +                      L  +      D+  L
Sbjct: 134 IAFPGCPNFSLRLRVFSLNCWGIPYLSKHRAD---------RVKRLGDFLNMESFDLALL 184

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ S      +  K       S      H  R         +  +     + Q  Y L 
Sbjct: 185 QEVWSEQDFQYLRQK------LSPTYPAAHYFRSGIIGSGLCVFSKHSIQEITQHIYTLN 238

Query: 132 GAKD---SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           G             +    L++ ++G  +     HL +               +    QA
Sbjct: 239 GYPYMIYHGDWFCGKAVGLLVLHLSGLVLNAYVTHLHA-----EYNRQKDIYLAHRVAQA 293

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNA 247
             L  +I    +     ++ GD N     LG      W  +       R  K  +  C  
Sbjct: 294 WELAQFIHHTSKKADVVLLCGDLNLHPKDLGCRLLKEWTGLHDAYLETRDFKGSEEGCTM 353

Query: 248 NKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                               IDY +  +   +F I      +          G  LSDH 
Sbjct: 354 VPENCYVSRQELEPFPLGIRIDYVLY-KAVSRFYISC--KTLKTTIGRDPHSGTPLSDHE 410

Query: 297 PISIDY 302
            +    
Sbjct: 411 ALMATL 416


>gi|327474597|gb|EGF20002.1| exodeoxyribonuclease [Streptococcus sanguinis SK408]
 gi|328946601|gb|EGG40739.1| exodeoxyribonuclease [Streptococcus sanguinis SK1087]
          Length = 275

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDVEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +               +  ++    L        +   
Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLEDRQVWDAKYAEYLATL--------DGQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        +  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPDQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|237750354|ref|ZP_04580834.1| exodeoxyribonuclease LexA [Helicobacter bilis ATCC 43879]
 gi|229373884|gb|EEO24275.1| exodeoxyribonuclease LexA [Helicobacter bilis ATCC 43879]
          Length = 255

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 76/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N L                         +   +DAD+  +QE   + + +  
Sbjct: 1   MKMISWNVNGLRACMTKGFM---------------DFFNTIDADVFCIQESKMHRSQSDF 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +   E              ++   +  K   +            +      R
Sbjct: 46  VFDGYYQFWNEAE-----------KKGYSGTIILSKTEPLSV----CNDMGIAHHDKEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V           ++++++  +                      + L+ +         
Sbjct: 91  IIVA-----EYATFFLVNVYTPNSKRELERLTYRQEWEDDFRSFLKGLEQY--------K 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                         +    +  +  +  +      + +A 
Sbjct: 138 PVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMSVLLDSGFIDSYRYFYPDKEHAY 197

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ +   K L +                    SDHCP+ 
Sbjct: 198 TWWSYMGKARQNNTGWRIDYFLLSRCLAKNLKEAHI-----------YPEIMGSDHCPVG 246

Query: 300 IDYD 303
           I  D
Sbjct: 247 IVID 250


>gi|188997510|ref|YP_001931761.1| exodeoxyribonuclease III Xth [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932577|gb|ACD67207.1| exodeoxyribonuclease III Xth [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 264

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 90/306 (29%), Gaps = 69/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ ++N+N            +   R       L    +N D D++  QE  +   N  +
Sbjct: 1   MKICTFNVN------------SIKARKDLVIEWLNH--RNNDIDVLCFQEIKVEDKNFPS 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F K  +                S    +  +A   K       S+   G    +    
Sbjct: 47  EDFKKLGYVYQ-----------DISGQKGYNGVATLSKLEI----SHYQKGLNHEYFDVQ 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE- 200
            R  ++ ++E   K+I+V++ +          +  Y           +   +++ +  + 
Sbjct: 92  KRVLIDKIIE---KEIFVINTYAPHGDLRGGEKYYYKLD------WYKHFINFLKENFDF 142

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFW-------------------KTIDPNDSLIRFPKEK 241
                ++ GD N  +  +   D                           +     +P ++
Sbjct: 143 ENQKIMLLGDLNIALEDIDVYDPVLLTDSIGTMPEERELLRQLLNLGLIDTFRYLYPNKQ 202

Query: 242 DSRCNANK----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            + IDY ++ +   +++                 R  + SDH P
Sbjct: 203 QFTWWDYIGGAIWRNEGMRIDYILVSKPFLQYVKNVEVDLWPRR-----RRSPKPSDHAP 257

Query: 298 ISIDYD 303
           + +D +
Sbjct: 258 VILDLE 263


>gi|262383334|ref|ZP_06076470.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 2_1_33B]
 gi|262294232|gb|EEY82164.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 2_1_33B]
          Length = 304

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 91/331 (27%), Gaps = 55/331 (16%)

Query: 2   IRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           +RK    L    + C A  A       V++ S+NI  L+   G               + 
Sbjct: 1   MRKISEILCCVAILCCALSACSDKPATVKVSSFNI-WLNTLGGKLPP-----------SQ 48

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
             +  +    DIV +QE         ++ ++     +  E   +      N      I  
Sbjct: 49  TAKVIEASQTDIVGIQE-------GHIYEEDGIKHDHVPEIAESLGFHLFNQGEGHYILS 101

Query: 117 RKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           R   V      Y   +   KD F    N     +      +   +  I    + F+D+ E
Sbjct: 102 RYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYI----PYQPYQLNGIPYGDYPFIDTEE 157

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223
                +     ++    +  I Q  +   P  + GDFN                      
Sbjct: 158 EAVWFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEPSFLDWTQRAADAGIHKIKVE 217

Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQE 273
                 +  I  NDS      ++ S                  +D+ +         + +
Sbjct: 218 WPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILDRLDFVLYSG----CKVTD 273

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           SF                 SDH  ++  ++F
Sbjct: 274 SFITGESEATSDVVVSPYPSDHRMVTSCFNF 304


>gi|229159517|ref|ZP_04287533.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
 gi|228623974|gb|EEK80784.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
          Length = 247

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 2   EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 61

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 62  WDFSHIGYDVYEEGLAIITKHSIIKEDTFFVSENKDTAYWK-TRKIVSATIAYNGKNITF 120

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 121 YSCHLGW----------WNDEEESFKGQIDRLMERVD----SNALAFLMGDFNNNARLEG 166

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      K            ID  + +Q       +  
Sbjct: 167 EGYEYTMQKGLYDTYELAIEKDEGTTVQGKIAGWDENKHNLRIDLILCNQGKTVRSSKVI 226

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+ I  N          +SDH  + +  D
Sbjct: 227 FNGINRNV---------ISDHFGVEVQLD 246


>gi|229108038|ref|ZP_04237664.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
 gi|228675438|gb|EEL30656.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
          Length = 263

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSATIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLKG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|260063471|ref|YP_003196551.1| hypothetical protein RB2501_01645 [Robiginitalea biformata
           HTCC2501]
 gi|88782915|gb|EAR14089.1| hypothetical protein RB2501_01645 [Robiginitalea biformata
           HTCC2501]
          Length = 332

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 82/289 (28%), Gaps = 62/289 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +R+ S+N               +V     +   LR   ++++ADI+  QE+  Y + 
Sbjct: 94  TEGLRIASFN-------------SGNVLAEADNPAGLRTAMEDINADILCFQELERYGSF 140

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                +  +  F                   +  A+  +   V   S       ++    
Sbjct: 141 D--VSRYPYRAF------------SPEIIGKSTQAIFSEYPIVRSGSIDFPDTSNN---- 182

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY-------SPSCSLLSQQAQWLKD 193
               A+   V + G  I + ++HL+S+                     ++  Q     + 
Sbjct: 183 ----AIFADVAVKGDTIRIYNVHLESYRIRSERILYREYGGWFLRRFRAVAGQHVSQARL 238

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
               ++E+  P +I GDFN               I        F +              
Sbjct: 239 VKAHQQEAPYPTIICGDFNATPFSHTYR------ILSAGLEDSFGQAGSGIGATYSLRGL 292

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              IDY + D               +++          LSDH P+    
Sbjct: 293 PYRIDYILADSRMEV------LHHKIFDIH--------LSDHRPVMATL 327


>gi|320170545|gb|EFW47444.1| 2'-phosphodiesterase [Capsaspora owczarzaki ATCC 30864]
          Length = 663

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/362 (10%), Positives = 85/362 (23%), Gaps = 70/362 (19%)

Query: 13  LVPCTA---SVAQKVRLVSWNINTLSEQEGV-------SLWKNSVKRTTSDYTLLRQYAK 62
           L P +    S   ++R+V++NI      +                 +      ++ +  +
Sbjct: 300 LAPVSPLERSAGAQLRVVTYNILADVYADSDYARTVLYPYCAPFALKLDYRRQMIARELQ 359

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKN 120
             D D+V LQE+          P      F    R    S  +  +     +  ++   +
Sbjct: 360 RFDGDLVCLQEVERKQFQTFFEPFMESLGFLGLFRCKTRSIAEGSAMFFRRSQFSLVSSH 419

Query: 121 VRVLQQSYPLLGAKDSFSR-AGNRRAVELLVEINGK--KIWVLDIHLKSFCFL------- 170
              L + +         +R       ++   E      +I VL                 
Sbjct: 420 DVALNERWKTAPHCAKLARLLETHSGLQAKFEELSTVAQISVLHQLEHPTGSPARFVIAA 479

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWI--------TQKKESLVPFVIAGDFNRK-------- 214
           ++    +  + +    Q   +   I         Q   + +  V  GDFN          
Sbjct: 480 NTHLYFHPKANNFRLMQMSVILSEIESAKAALREQHPHARIAVVFCGDFNSWSDRAACKL 539

Query: 215 ------INYLGNNDDFWKTIDPNDSLIRFPKEK-------------------------DS 243
                      + D   +     ++                                   
Sbjct: 540 ATMGSIPASHEDWDFLLELASGEENEDASSSSSVNASANTARRLGVDLDHGLHLVSVCGD 599

Query: 244 RCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N        +D+  +         +    S      +         SDH  +  D+
Sbjct: 600 AAYTNYVGGFNACLDHIFVDSHELAVTSVLPMPSHHEVTTNRALPSVVFPSDHLALVADF 659

Query: 303 DF 304
            +
Sbjct: 660 RW 661


>gi|238650485|ref|YP_002916337.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic]
 gi|238624583|gb|ACR47289.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic]
          Length = 271

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+ A     DI+ LQE    +++   
Sbjct: 1   MKIVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVADSL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       S    +  +A+  K       S  L  +         R
Sbjct: 42  ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +I     +V           D  +   +       +  + +++W+T  +    
Sbjct: 89  HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N   +                         +  +    +             
Sbjct: 142 KMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFIDSSRHFVSLDEKF 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L          +           SDH P
Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGAL-------FSMHLLSEARDWFSPSDHVP 254

Query: 298 ISIDYD 303
             + ++
Sbjct: 255 YFVTFN 260


>gi|229367158|gb|ACQ58559.1| Deoxyribonuclease-1 precursor [Anoplopoma fimbria]
          Length = 273

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 77/284 (27%), Gaps = 46/284 (16%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT 88
           +NI +  E                    + +       DI+ +QE+        V     
Sbjct: 25  FNIKSFGE---------KKASDPVVMGYISEIVCRY--DIILIQEVRDP---RLVATNIL 70

Query: 89  WCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                S      + K  SN               R   V ++   Y      +   +  +
Sbjct: 71  MNYVNSRCPQYAYHKEVSNPLGPSTYKERYLFLYRTTTVSLVGSYYY-----NDTQQLFS 125

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKE 200
           R    +     G+ I ++  H                      ++   L D +   + + 
Sbjct: 126 RPPFIVKFNDAGRNIVLIPQHTSPKSGQT-------------WKEIDALYDVVTDARAQF 172

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++ GDFN   +Y+  +D     +  +        +      ++         D  
Sbjct: 173 QTNNIMLLGDFNAGCSYVSRSDWQNIRLFTDKKFDWLIPDSADTTVSHSKCPY----DRI 228

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
           V+  +  K ++  S     Y      +    K +SDH P+ +  
Sbjct: 229 VVTDDLMKEVVSGSAGVFDYELAYGLTPVQAKAVSDHFPVEVAL 272


>gi|254168985|ref|ZP_04875824.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
 gi|197622091|gb|EDY34667.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
          Length = 255

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 86/306 (28%), Gaps = 78/306 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80
           ++ L+SWN+N +                         + +    DI+ LQE+ +   N  
Sbjct: 2   ELLLISWNVNGIRACVRNGF---------------LDFLEKYKPDILALQEIKATEDNVP 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +V     +  +++  +   ++            A+  K   +  +        DS  R 
Sbjct: 47  MEVRYYPDYHKYWNPAKKKGYA----------GTALFTKIEPLNVKFGIGEDKFDSEGR- 95

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   ++    +K ++++ +  +     +  +       L+      L+        
Sbjct: 96  --------VITAEYEKFYLVNAYFPNSQHGLTRLDFKIEFDKLIHSYLNELRK------- 140

Query: 201 SLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSR 244
              P ++ GDFN     +                       K +            K+  
Sbjct: 141 -KKPVILCGDFNVAHKEIDLANPKQNVKNAGFTPQERAWMDKFLQDGYIDTFRMFTKEGG 199

Query: 245 CNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  R K         +DYFV+ +     +        +Y            SDH P
Sbjct: 200 HYTWWTYRFKARERNIGWRVDYFVVSEELKDKVKSSWILSEVY-----------GSDHAP 248

Query: 298 ISIDYD 303
           I++  D
Sbjct: 249 IAMVLD 254


>gi|157164085|ref|YP_001465973.1| exodeoxyribonuclease III [Campylobacter concisus 13826]
 gi|112801830|gb|EAT99174.1| exodeoxyribonuclease III [Campylobacter concisus 13826]
          Length = 252

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L        +                +   +  D + LQE+         
Sbjct: 1   MKLISWNVNGLRAVVAKDGFG---------------WLDEVKPDFLGLQEI---KVKEDD 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            PK  + + +    + +          ++ +    K     Q++      +         
Sbjct: 43  VPKEIYNLGFKDISVNS-----GARAGYSGVMSLAKFEVQTQKAAFFDDTEGR------- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E     I + +I+  +    D          +      +    +  +  +S  
Sbjct: 91  -----VLEHRFDDIVLFNIYFPNGQKDDER-------LAYKMDFYEKFLAYCKELVKSGK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GD N                    L     +   +  +  +  F        +A 
Sbjct: 139 EVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAWIDEVLKSGFIDTFRAVNGDVADAY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + Q     L        +             SDHCP+ 
Sbjct: 199 SWWSYRFNARAKNVGWRIDYFFISQGLKDRLKDAFILPEIV-----------GSDHCPVG 247

Query: 300 IDYD 303
           I+ +
Sbjct: 248 IEIE 251


>gi|145225449|ref|YP_001136127.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK]
 gi|315445802|ref|YP_004078681.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1]
 gi|145217935|gb|ABP47339.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK]
 gi|315264105|gb|ADU00847.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1]
          Length = 274

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 79/304 (25%), Gaps = 62/304 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
            V + + N+N +             +R+  +  +L  + K   AD+V LQE         
Sbjct: 4   PVTVSTINVNGIRA--------AIKQRSPENLGML-PWFKETAADVVCLQETRADDAQLA 54

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             + P        ++           +      +AV  ++     +    +G        
Sbjct: 55  EALAPVLADGWHLASAE--------PSMKGRNGVAVLSRDPIDEFR----IGCGAEEFAT 102

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R      +E +   + V  ++  +       +       + ++ +   L   + +   
Sbjct: 103 HGRY-----LEADTAGVTVASVYFPTGEAETDRQREKERFMAAVAARMAAL---LQRSVV 154

Query: 201 SLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRC 245
                V+ GD+N         +                +   +     +    +      
Sbjct: 155 DGHESVLCGDWNIAHTENDIKNWKGNVKKAGFLPQERQWLTEVLGTGWVDVVRQAHPDVA 214

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY +                     +   +   R SDHC
Sbjct: 215 GPYAWWSWRGKAFDNDAGWRIDYHLATPGLAARATSVL-------TERPAAYALRWSDHC 267

Query: 297 PISI 300
           P+++
Sbjct: 268 PVTV 271


>gi|284036131|ref|YP_003386061.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
 gi|283815424|gb|ADB37262.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
          Length = 372

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 87/295 (29%), Gaps = 47/295 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  + +++ S+N+ +    E  S + +S +   +D      Y    DA I   QE  +  
Sbjct: 105 SQGKPIKIFSYNVQSFDLNESWSFYTSSPRVRRTD-----NYVLRYDAPIKCFQEFYNST 159

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           ++        +        ++ + +     +     A+      V     P  G+     
Sbjct: 160 SIPDYNVVLRFRKAGYRYSVLLYPQNALVPEGDIGAAIFSIYPIVDSGREPFGGSN---- 215

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS--------------CSLL 184
                  V   ++I    I V+++HL+S         T                   +  
Sbjct: 216 -----GVVWANIKIGNDTIRVINVHLRSMGIRVGKVLTQKEMKGVKRETRGVLTALHNGF 270

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           + + + +   I   +ES  P ++ GD N            ++ +            +   
Sbjct: 271 TDRREEVYKVIDYIRESPYPVIVTGDHNDTP-----YSVVYERLRQVLPNSFEDGGRGFG 325

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              N+     I ID+   D              + +   +        SDH PI 
Sbjct: 326 FTYNRLPGF-IRIDHQFHDPKLP---------VLNFETLNYIGY----SDHYPIV 366


>gi|254517037|ref|ZP_05129095.1| endonuclease/exonuclease/phosphatase [gamma proteobacterium NOR5-3]
 gi|219674542|gb|EED30910.1| endonuclease/exonuclease/phosphatase [gamma proteobacterium NOR5-3]
          Length = 395

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 46/385 (11%), Positives = 101/385 (26%), Gaps = 86/385 (22%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNI--NTLS------EQEGVSLWKNSVKRTTSDYTL 56
           ++L +   +     S  + +R+ ++N+     +         G  L            + 
Sbjct: 8   FLLVVALLMPVGAQSEGRVIRVATFNVSMEGGNYVGKGVTPSGHELPAALSNSDHPQISN 67

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKN---------------TWCIFYSTE----- 96
           + +  + +  DIV L E   +   A+                     +  FY        
Sbjct: 68  IAEIIQRVRPDIVLLNEFDYHADPARGVTPFLERYLQQARAGTAAIDYPYFYQGPVNTGV 127

Query: 97  -------------RLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSRAG 141
                           N +           + +  +        +S+ L   KD      
Sbjct: 128 DSGMDLDRDGKASGTGNDAFGFGLYPGQYGMLILSRYPIDFEAIRSFQLFKWKDMPDNLM 187

Query: 142 --NRRA---------------------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
              R A                      ++ V ING+ + VL  H     F    +    
Sbjct: 188 ADMRGADGELWYPEAVQEQLRLSSKSHWDIPVRINGESLHVLASHPTPPVFDGPEDRNGR 247

Query: 179 PSCSLLSQQAQWLK-----DWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFWKTI 228
            +   +     ++       +I   K          FV+ GD N  +       +    +
Sbjct: 248 RNHDEIRFWVDYIAGGEQAAYIYDDKGQSGGLRGDRFVVVGDLNASMEEGDARREGITAL 307

Query: 229 DPNDSLIR---------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
             ++ + R              DS           +  DY +  ++ ++ +    F    
Sbjct: 308 LGHEKVRRGLLPTSDGGRANRADSSFGPAHTASWGMRADYVIPSKSGWRVIDAGVFWPTP 367

Query: 280 YNEDDIKSRGKRLS-DHCPISIDYD 303
            +      + +  S DH  + +D +
Sbjct: 368 DDPLWRLVKKRSSSSDHRLVWMDLE 392


>gi|302560173|ref|ZP_07312515.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000]
 gi|302477791|gb|EFL40884.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000]
          Length = 276

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/309 (10%), Positives = 77/309 (24%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + S N+N L                        ++     AD++ LQE+   +     
Sbjct: 8   LTVTSVNVNGLRAAAKKGF---------------VEWLAGTSADVLCLQEVRAEAKQLPE 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V     W + ++       +                  V +  +  P        S   
Sbjct: 53  TVREPEGWHVVHAPAAAKGRAG-----------------VSLYTRREPDRVRVGFGSEEF 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +     + V++ G  + V  ++L S       ++             + L++        
Sbjct: 96  DTAGRYVEVDLPG--VTVASLYLPSGEVGTERQDEKMRFMGEFLAHLKGLRERA---AAD 150

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTID--PNDSLIRFPKEKDS 243
               V+ GD+N                         +   + +D      +         
Sbjct: 151 GREVVVCGDWNIAHEKADLKNWRGNTKSSGFLPEEREWLSRVLDPADGGYVDVVRALHPD 210

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           ID  V         ++          +   +  +R SD
Sbjct: 211 VDGPYSWWSYRGRAFDNDTGWRIDLAVATPGLAGRAVKAYV-------ERAATHAERWSD 263

Query: 295 HCPISIDYD 303
           H P+++ ++
Sbjct: 264 HAPVTVVFE 272


>gi|291416360|ref|XP_002724415.1| PREDICTED: DNase X (predicted)-like [Oryctolagus cuniculus]
 gi|217418274|gb|ACK44278.1| DNase X (predicted) [Oryctolagus cuniculus]
          Length = 304

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 71/289 (24%), Gaps = 33/289 (11%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S A+  R+ ++N   L+          +          L +       DI+ LQE+   +
Sbjct: 14  SGAEAFRICAFNTQRLTL---------AKVAKEEVMDTLVRIVARC--DIMVLQEVVDSS 62

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKD 135
             A          F  +    +          +        R    +VL          +
Sbjct: 63  DAAISLLLRELNRFDGSGPYRSLKSDMLGRSTYMEKYVYIYRSHKTQVLDSYVY-----E 117

Query: 136 SFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  R        +  K +  ++ + L +       E        L   Q       
Sbjct: 118 DQDDLFAREPFVAHFTLPSKVLPSLVLVPLHTTPKDVEKELNALYDVFLDVSQHWQ---- 173

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                      ++ GDFN     L         +  +        + D            
Sbjct: 174 -------NQDVILLGDFNADCASLTKKRLSELLLRTDAGFRWAIADGDDTTVRASTHCAY 226

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             I   +  +     L   +  +   +    +    ++SDH P+ ++  
Sbjct: 227 DRI--VLHGERCQSLLQAAAAFDFPRSFQLTEEEALKISDHYPVEVELS 273


>gi|91205073|ref|YP_537428.1| exodeoxyribonuclease III [Rickettsia bellii RML369-C]
 gi|157827591|ref|YP_001496655.1| exodeoxyribonuclease III [Rickettsia bellii OSU 85-389]
 gi|91068617|gb|ABE04339.1| Exodeoxyribonuclease III [Rickettsia bellii RML369-C]
 gi|157802895|gb|ABV79618.1| Exodeoxyribonuclease III [Rickettsia bellii OSU 85-389]
          Length = 273

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 75/307 (24%), Gaps = 76/307 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++V+WNIN+L                     LL++ A     DI+ LQE  +       
Sbjct: 1   MKIVTWNINSL----------------RLRIDLLKRLAYEHQPDIILLQETKVDDPLFPL 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     +                S    +  +A+  K       S  L           
Sbjct: 45  EVIKNIGYEHVI-----------YSGQKSYNGVAIISKLPLQNVSSLELYNGDK------ 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +  I     +V           D  +   +       +  + +++W+T  +  
Sbjct: 88  -RHIAATVNNIEIHNFYV-------PAGGDIPDIELNSKFKHKLEYIRLMQEWLTNNRTR 139

Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               +IAGD N                   +         +  +  + +           
Sbjct: 140 DDKIIIAGDLNIAPHPHDVWSSKQLRNVISHTDIERSLLVELQNSLEFIDSSRHFVPLDE 199

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+  +  N    L          +           SDH
Sbjct: 200 KFYTWWSYRNVDWKKSNRGRRLDHIWVSNNLKDEL-------FSIHLLSEARDWMPPSDH 252

Query: 296 CPISIDY 302
            P  +  
Sbjct: 253 VPYFVTL 259


>gi|319645540|ref|ZP_07999772.1| hypothetical protein HMPREF1012_00805 [Bacillus sp. BT1B_CT2]
 gi|317392426|gb|EFV73221.1| hypothetical protein HMPREF1012_00805 [Bacillus sp. BT1B_CT2]
          Length = 214

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 74/253 (29%), Gaps = 47/253 (18%)

Query: 60  YAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                  DI+ L E+           + + ++  +       +    ++ S  DS+    
Sbjct: 1   MIAQSGCDIIGLNEVDRHFSNRSDYEDQIGRLAEQLNMHY--AYCPSLSLSSGDSSEKRQ 58

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
              A+  +     ++ +              R  +E  V I  +   V   HL    +L 
Sbjct: 59  YGNALLTRFPIKKERHH---SFNFVKGLIEGRSLLEADVRIGDRLFRVFVTHLSLNPWLH 115

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
             +  +                 I + +ES +P ++ GDFN K    G            
Sbjct: 116 GKQTDF----------------LIEKVQESDLPVIVTGDFNMKPYSRGWKKV------AE 153

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                + + +  +   + + R +  +DY  +  + +    +    +              
Sbjct: 154 KLADLWDESQYGQGFTHPSHRPRRRLDYIFLSPSFHVSAAEIVAVDPN------------ 201

Query: 292 LSDHCPISIDYDF 304
            SDH P+     +
Sbjct: 202 ASDHLPLKGSITY 214


>gi|322389122|ref|ZP_08062685.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 903]
 gi|321144164|gb|EFX39579.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 903]
          Length = 282

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 82/308 (26%), Gaps = 56/308 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++L+SWNI++L+        +  +         + Q     DADI+ +QE       
Sbjct: 5   GNTMKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAEDADIIAIQETKLSAKG 58

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                       +        S ++S    +       K       ++P +GA  +    
Sbjct: 59  PTKKHLEILEELFPQYENTWRSSQESARKGYAGTMFLYKKELSPIVTFPEIGAPSTMDLE 118

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G      + +E +G   +V  ++  +                  ++    L        +
Sbjct: 119 GR----IITLEFDG--FFVTQVYTPNAGDGLKRLAERQVWDVKYAEYLADL--------D 164

Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              P +  GD+N               R   +     + +  +        F        
Sbjct: 165 KEKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVP 224

Query: 246 NANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            IDY++        + +    +    +           DH
Sbjct: 225 ERYTWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DH 273

Query: 296 CPISIDYD 303
            PI ++ D
Sbjct: 274 TPIVLEID 281


>gi|309782328|ref|ZP_07677055.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA]
 gi|308918946|gb|EFP64616.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA]
          Length = 287

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 88/302 (29%), Gaps = 47/302 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           +++WNI      +G      S+ R       + ++      D++ LQE+ S  +     P
Sbjct: 5   ILTWNIQWGRGADGHV----SLARQLKQAREMAEF------DVLCLQEVTSGFSDLPGQP 54

Query: 86  KNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                   +      ++        + +  +      A+  +      Q + L    D+ 
Sbjct: 55  GADQWSELADALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDTT 114

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLSQQAQWLK 192
                R A+E +V+     + ++  HL+ +  L                   + Q   L 
Sbjct: 115 P-YMPRMAIEAIVQAAFGALRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPARLG 173

Query: 193 DWITQ----KKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRC 245
                            +I GDFN K + +        F +    +D+            
Sbjct: 174 AEPEAGPFRPLAQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPP 233

Query: 246 NANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 R          D+ ++ +     +++   +              + SDH P+ +
Sbjct: 234 TFGVYDRADWTEPAYACDFMLISEPLKPRVLRLEIN-----------SATQASDHQPMLL 282

Query: 301 DY 302
           + 
Sbjct: 283 EL 284


>gi|89269844|emb|CAJ82549.1| deoxyribonuclease I-like 3 [Xenopus (Silurana) tropicalis]
          Length = 295

 Score = 75.7 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 81/300 (27%), Gaps = 32/300 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +             +++ S+N+ +  E         S +   +   ++R+       DI 
Sbjct: 4   LLLFWALFVPHTLGLQICSFNVQSFGE---------SKRDKPAVMNIVRKVISRC--DIT 52

Query: 70  FLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            L E+   +      +       +         +     R S  + +     RKK V V 
Sbjct: 53  LLMEIKDSSDTVIRSLMTQLNSQSETRNQFDLTISQRLGRKSYKEQY-GFIYRKKLVSVR 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             +Y    ++     A +R    +  E     +    I  +      + E        L 
Sbjct: 112 -GTYQYEDSQPGDPDAFSREPYVVWFEAPSTDVREFVIVPQH----TTPEAAVREIDELY 166

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                  + W      +   F+  GD N    Y+         +  +   +    +K+  
Sbjct: 167 DVYLDVKQKW------NSENFIFMGDLNAGCAYVPKKAWGNIRLRTHSEFVWLIGDKEDT 220

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
                       I   +        ++  S     +      +  + L  SDH P+ +  
Sbjct: 221 TVNASTKCAYDRI--VMAGDKLLSSVVPGSAQVFDFMAVYGLTEDQALEVSDHFPVEVQL 278


>gi|294506334|ref|YP_003570392.1| dioxygenase [Salinibacter ruber M8]
 gi|294342662|emb|CBH23440.1| dioxygenase [Salinibacter ruber M8]
          Length = 366

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 68/298 (22%), Gaps = 51/298 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R++++N+              +  R       L +  +     ++ +QE       
Sbjct: 100 ADALRVMTFNL------------SPAFARGPDRERTLAELVQREAPAVLSVQETWMKTRS 147

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A                  +                R    +V   S  +     S    
Sbjct: 148 ASDGGGLFVSWPLRVLLEDSVGYALPRARPPETTIYRPVLGQVRLDSMRVHPLPPSGGSD 207

Query: 141 GNRRAVELLVEINGKKIWVLDIHLK--------------SFCFLDSLENTYSPSCSLLSQ 186
              R         G+   + ++HL               S     +   TY       + 
Sbjct: 208 PRSRYTRTFFTWQGRPAVLYNVHLHTVGPRPWDLPGTAASLARWRTFLRTYRAGALHRAD 267

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           QA+ +   I Q      P ++ GDFN   +                           +  
Sbjct: 268 QARRIHRHIEQ---ETRPVLVTGDFNSTPHQWAYRHLLQGFRAAGGGATFPAGWPLVQ-- 322

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     ID+ ++               +             +SDH P+     +
Sbjct: 323 ----------IDHVLVGPE----------WRVGSATVPGLEATDFVSDHRPVVARVRW 360


>gi|229188637|ref|ZP_04315676.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
 gi|228594826|gb|EEK52606.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
          Length = 263

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSATIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFEGQVDRLMERVD----SNKLAFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|300362647|ref|ZP_07058823.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03]
 gi|300353638|gb|EFJ69510.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03]
          Length = 275

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWNI++L+        +  + R       +    K  D DI+ +QE          
Sbjct: 1   MRLISWNIDSLNAALTSDSARAKLTRG------VLNTIKEKDPDIIAIQETKLRATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +     +  S  +     +       KN    + + P++GA +     G  
Sbjct: 55  KHQEILAEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPVIGAPEPMDHEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +        +         ++  Q L            
Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQV--------K 160

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GD+N                   +       +  +        F K   +     
Sbjct: 161 PVIASGDYNVAHTPIDLKHPENNHHNAGFTDEERQDFDKLLKLGFTDTFRKIHGNVEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +    +           DHCPI
Sbjct: 221 SWWAQRVRTSKANNSGWRIDYYIVSNRIANQITKSEMLDTGERK-----------DHCPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 MLEIN 274


>gi|108759047|ref|YP_634952.1| putative deoxyribonuclease I-like protein [Myxococcus xanthus DK
           1622]
 gi|108462927|gb|ABF88112.1| putative deoxyribonuclease I-like protein [Myxococcus xanthus DK
           1622]
          Length = 287

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 77/288 (26%), Gaps = 26/288 (9%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  A     +R+VSWN+         +  +++ +              N   D+VFLQE+
Sbjct: 19  PTWAQAGSYLRVVSWNLRHEGWTAEQTYREDAEQIWRQYG---ANSNSNNGCDLVFLQEV 75

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            + + V  +  +                   S+     A+  R+  V +L  S       
Sbjct: 76  MNASVVPAIVAELNAVSGVKWRYAQTPLIGRSSYKEIYAVLYREDTVSLLSSSVYE-DTG 134

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D+F R      V +     G     ++ H       D              +Q   +   
Sbjct: 135 DTFEREPQ--IVRVRHTPTGADYTFINWHTVWGNPSDRDAE---------VKQIGAVFKS 183

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +     +    ++ GD N         +    +      L        S    N      
Sbjct: 184 VQDASRTDQDVILVGDHNMACTTASWANLVALSPTVECKLNVATTINLSGGYVNAY---- 239

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              D+F M               I    D +        DH PI +  
Sbjct: 240 ---DHFWMQPEYVTEFSSAGRDYIGNTRDFVTRLA----DHAPIYLTL 280


>gi|91205020|ref|YP_537375.1| exodeoxyribonuclease III [Rickettsia bellii RML369-C]
 gi|157827649|ref|YP_001496713.1| exodeoxyribonuclease III [Rickettsia bellii OSU 85-389]
 gi|91068564|gb|ABE04286.1| Exodeoxyribonuclease III [Rickettsia bellii RML369-C]
 gi|157802953|gb|ABV79676.1| Exodeoxyribonuclease III [Rickettsia bellii OSU 85-389]
          Length = 261

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 85/302 (28%), Gaps = 67/302 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                       +LR +  N + D++ LQE+   +     
Sbjct: 1   MKIATWNIN----------------SIKMRINILRDFLANENPDVLLLQELKCESD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + ++        +  +A+  K          +    ++      R
Sbjct: 41  ------KFPFEELSDLPYNFYVHGQKSYNGVAILSKFP----ADEIVKDFPNNHCSDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E  + +      ++ ++  +   + S + T   +            ++++ KK    
Sbjct: 91  F-IEARISLPIGFCNIISLYAPNGSMVGSDKFTAKLAF------YDSFFNYLSSKKSFDE 143

Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNA-------NK 249
             +I GDFN     +             +  I+            +              
Sbjct: 144 KTIIGGDFNIAPFDIDVYSPTALANTTCFTEIEQKKMRTILNSGFEDCYRFLHPKKQEFS 203

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +         + ID  +   N+  +L            D      ++ SDH P+  
Sbjct: 204 WWDYRAGCFEQNKGMRIDMILGSNNSIDYLENCYM-------DYNLRTKEKPSDHIPVIA 256

Query: 301 DY 302
           ++
Sbjct: 257 NF 258


>gi|305666072|ref|YP_003862359.1| exodeoxyribonuclease [Maribacter sp. HTCC2170]
 gi|88707506|gb|EAQ99749.1| exodeoxyribonuclease [Maribacter sp. HTCC2170]
          Length = 253

 Score = 75.7 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 87/302 (28%), Gaps = 73/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+N+N +                         + K  D D++ LQE+       K 
Sbjct: 1   MKIVSYNVNGIRAAINKGF---------------LDWLKATDPDVICLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +      N+    +    ++ +A+  K     Q  +   G    +     R
Sbjct: 39  MKEQLDLSLFEEAGYANNYWYSAQKKGYSGVAILSKK----QPDHVEYGTGIDYMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + ++ ++L S   +D              +     + ++   +++  
Sbjct: 95  N-----LRADFDGVSIMSLYLPSGTNMD--------RLEFKLKYMAEFQRYVDDLRKAHP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             +I GD+N     +  +D                W         I   +  +   +   
Sbjct: 142 NLIILGDYNICHEAIDIHDPVRNKKVSGFLPVEREWIGSFIESGFIDSFRHLNKEPHNYT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DY ++ +     L +                  R SDHCPI +
Sbjct: 202 WWSYRANARNNNKGWRLDYGMVSEPLENRLKRSVIL-----------SDARHSDHCPILV 250

Query: 301 DY 302
           + 
Sbjct: 251 EL 252


>gi|229586510|ref|YP_002845011.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5]
 gi|228021560|gb|ACP53268.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5]
          Length = 271

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 79/306 (25%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WNIN+L                     LLR+ A     DI+ LQE    +++   
Sbjct: 1   MKIVTWNINSL----------------RLRIDLLRKLAYEHKPDIILLQETKVADSL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       + +       S    +  +A+  K       S  L  +         R
Sbjct: 42  ------FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------R 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +I     +V           D  +   +       +  + +++W+T  +    
Sbjct: 89  HIAAIVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYVRLMQEWLTTNRTKND 141

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +I GD N   +                         +  +    +             
Sbjct: 142 KMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFIDSSRHFVSLDEKF 201

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  N    L          +           SDH P
Sbjct: 202 YTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGAL-------FSMHLLSEARDWSSPSDHVP 254

Query: 298 ISIDYD 303
             + ++
Sbjct: 255 YFVTFN 260


>gi|241662748|ref|YP_002981108.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D]
 gi|240864775|gb|ACS62436.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D]
          Length = 287

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 88/302 (29%), Gaps = 47/302 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           +++WNI      +G      S+ R       + ++      D++ LQE+ S  +     P
Sbjct: 5   ILTWNIQWGRGADGHV----SLARQLKQAREMAEF------DVLCLQEVTSGFSDLPGQP 54

Query: 86  KNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                   +      ++        + +  +      A+  +      Q + L    D+ 
Sbjct: 55  GADQWSELADALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDTT 114

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLSQQAQWLK 192
                R A+E +V+     + ++  HL+ +  L                   + Q   L 
Sbjct: 115 P-YMPRMAIEAIVQAAFGALRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPATLG 173

Query: 193 DWITQ----KKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRC 245
                            +I GDFN K + +        F +    +D+            
Sbjct: 174 AEPEAGPFRPLAQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPP 233

Query: 246 NANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 R          D+ ++ +     +++   +              + SDH P+ +
Sbjct: 234 TFGVYDRADWTEPAYACDFMLISEPLKPRVLRLEIN-----------SATQASDHQPMLL 282

Query: 301 DY 302
           + 
Sbjct: 283 EL 284


>gi|293190142|ref|ZP_06608680.1| 5'-nucleotidase family protein [Actinomyces odontolyticus F0309]
 gi|292821118|gb|EFF80070.1| 5'-nucleotidase family protein [Actinomyces odontolyticus F0309]
          Length = 788

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 85/350 (24%), Gaps = 73/350 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVS--LWKNSVKRTTS-------------------- 52
           P   +V    R+ ++N+       GV          RT +                    
Sbjct: 363 PSPPTVGGDTRVATFNVLNYFSDLGVDESGCSGYPDRTGAFVTAKKCKVRGAFSREAFAN 422

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNA----------VAKVFPKNTWCIFYSTERLINHS 102
               +      L AD+V L+E+ +  A          +A++           T   +   
Sbjct: 423 QEAKIVSAINALGADVVALEEIENPVAVGVGTDRDATLARLVEALNKAAGDGTWAYVPSP 482

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV------EINGKK 156
                 +    IA   K    +    P L   D       R+ +                
Sbjct: 483 PSVPQGEDVIRIAFIYK-PATIAPVGPSLIHDDPAFTGLARQPLAQEFARVTGQRAAPAT 541

Query: 157 IWVLDIHLKSFCFLDSLENTYS--------PSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             V+  H KS   +       +         + ++   QA  L  +  +  +   P ++ 
Sbjct: 542 FVVIGNHFKSKGSVPEGAPPGNVDNGDGQGNANAIRVAQATSLASFAARFADK--PTLLV 599

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GDFN                        + +   +   +         +D+   +  A  
Sbjct: 600 GDFNSYSQEDPIKAL---------EASGWARVSGAGEASYVYAGRSGSLDHVFSNAAAKP 650

Query: 269 FLIQESFSEILYNEDDIKSRG---------------KRLSDHCPISIDYD 303
            L   +   +   E                       R SDH P  I   
Sbjct: 651 LLSGVTSWAVNAQESIAFEYSRAGMNAHLTIEADNPYRSSDHNPEIIGLT 700


>gi|51261555|gb|AAH80151.1| deoxyribonuclease 1-like 3 [Xenopus (Silurana) tropicalis]
          Length = 295

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 82/300 (27%), Gaps = 32/300 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +             +++ S+N+ +  E         S +   +   ++R+       DI+
Sbjct: 4   LLLFWALFVPHTLGLQICSFNVQSFGE---------SKRDKPAVMNIVRKVISRC--DIM 52

Query: 70  FLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            L E+   +      +       +         +     R S  + +     RKK V V 
Sbjct: 53  LLMEIKDSSDTVIRSLMTQLNSQSETRNQFDLTISQRLGRKSYKEQY-GFIYRKKMVSVR 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             +Y    ++     A +R    +  E     +    I  +      + E        L 
Sbjct: 112 -GTYQYEDSQPGDPDAFSREPYVVWFEAPSTDVREFVIVPQH----TTPEAAVREIDELY 166

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                  + W      +   F+  GD N    Y+         +  +   +    +K+  
Sbjct: 167 DVYLDVKQKW------NSENFIFMGDLNAGCAYVPKKAWGNIRLRTHSEFVWLIGDKEDT 220

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
                       I   +        ++  S     +      +  + L  SDH P+ +  
Sbjct: 221 TVKASTKCAYDRI--VMAGDKLLSSVVPGSAQVFDFMAVYGLTEDQALEVSDHFPVEVQL 278


>gi|328705662|ref|XP_001947380.2| PREDICTED: CCR4-NOT transcription complex subunit 6-like
           [Acyrthosiphon pisum]
          Length = 572

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/342 (11%), Positives = 90/342 (26%), Gaps = 61/342 (17%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            V ++ +N+     +  +      +          ++    ++  ADI+ LQE+ +    
Sbjct: 214 PVTVMCYNVLCEKYATTQMYGYCPSWALSWDYRKKVILGEIRHYTADIITLQEVETDQFY 273

Query: 81  AKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
               P+     +             S                     +++  +   Q + 
Sbjct: 274 NFFLPELKKDGYDGVFSPKSRAKTMSENDRKRVDGCAIFFRAIKFTLIKEHLIEFNQLAM 333

Query: 129 PLLGAKDSF-SRAGNR--RAVELLVEINGKKIWV---------LDIHLKSFCFLDSLENT 176
                 D   +R   R    +  L++ N               + +      +     + 
Sbjct: 334 ANSSGSDDMLNRVMPRDNIGLAALLKTNETAWENSLPSEVQQPILVCTAHIHWDPEFCDV 393

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVP------FVIAGDFNRKINY------------- 217
                 +LS +   + +   +   ++         ++ GDFN   +              
Sbjct: 394 KLIQIMMLSNELNTILEDANRNYRNVNHHQPPIQLLLCGDFNSLPDSGVIEFLSAGKVSS 453

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------NANKNLRNKIPIDYFVMD- 263
                 D  +KT+    S    P E                  N     K  IDY     
Sbjct: 454 DHQDFKDLQYKTLLHKISTCDRPNEFMHSFKLSSAYENIMPFTNYTFNFKGIIDYIFYTR 513

Query: 264 QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
           Q      +    +   + ++ +         SDH P+ ++++
Sbjct: 514 QTMTPLGLLGPLAPEWFKDNKVLGCPHPHIPSDHFPLLVEFE 555


>gi|307353178|ref|YP_003894229.1| deoxyribonuclease I [Methanoplanus petrolearius DSM 11571]
 gi|307156411|gb|ADN35791.1| Deoxyribonuclease I [Methanoplanus petrolearius DSM 11571]
          Length = 431

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 81/284 (28%), Gaps = 33/284 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ + ++N+                        +L         DIV +QE+   +  A
Sbjct: 50  DEITVGAFNVQVFGTT---------KASNDEVMDILSDIICRY--DIVAIQEIRDSSGTA 98

Query: 82  KV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +   +       S   +I+     +++   +A       V +   S P    + S +  
Sbjct: 99  ILDLMEKVDKKNPSYAYVISERLGRTSSKEQSAYIYNTAKVNL--SSTPQTYPEPSGTDP 156

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +R                    + +                        + D+ T+   
Sbjct: 157 FHREPFIASFSSTEGSFIATFATIHTDP----------DEAEEEIDALTDVADYCTEILP 206

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++ GDFN   +Y   +D     +   +       + D+   +          D  
Sbjct: 207 EDEMVILMGDFNADCSYFDEDDA-SSPLRSGEYSWLIGNDLDTTTKST-----DCTYDRI 260

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRG--KRLSDHCPISIDY 302
           V+  +  K+   +    I ++E     +   + +SDH P+   +
Sbjct: 261 VVLGDYQKYYTGD-AGVIRFDELYDLDQDLTEDVSDHYPVYAKF 303


>gi|229148769|ref|ZP_04277019.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
 gi|228634777|gb|EEK91356.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
          Length = 263

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 74/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC------------IFYSTERLI 99
                L +  +  + D++ LQE+        V                   ++     + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALYVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|154492338|ref|ZP_02031964.1| hypothetical protein PARMER_01972 [Parabacteroides merdae ATCC
           43184]
 gi|154087563|gb|EDN86608.1| hypothetical protein PARMER_01972 [Parabacteroides merdae ATCC
           43184]
          Length = 353

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 75/305 (24%), Gaps = 71/305 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +      + +V++N +        ++ +               Y K L  DI+  QE 
Sbjct: 93  AASEQAGTPLTVVTYNASHFYWDRKYTMNEA------------AAYIKQLQPDIICFQEA 140

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +   +  +                                  +   YP+   K
Sbjct: 141 PGDGYYHRDSIRYAFDYVLYKYISRRTDH----------------LPTTIYSRYPIHSVK 184

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--------------------FLDSLE 174
             + +  +  ++   V IN + I V++ H ++                       +  L 
Sbjct: 185 ALYYKNSSNMSLIADVRINNQYIRVINNHFETTSVNAYRGIITAPGKSLEVRAKAVKDLI 244

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                +    ++QA  +   I   + S  P ++ GDFN        +             
Sbjct: 245 LKMKNNYLKRAEQADSIHAEI---ERSPYPVLVCGDFNDTPASYTYHQL------RKGLT 295

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             F           + L     IDY    +                   D  S     SD
Sbjct: 296 DGFRDCGSGYQYTFRQLYKLWRIDYVFYSE--------------FLKGQDCFSPDAPYSD 341

Query: 295 HCPIS 299
           H  + 
Sbjct: 342 HNMVV 346


>gi|118594300|ref|ZP_01551647.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth
           [Methylophilales bacterium HTCC2181]
 gi|118440078|gb|EAV46705.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth
           [Methylophilales bacterium HTCC2181]
          Length = 259

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 92/308 (29%), Gaps = 80/308 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           +++++ N+N +                 +    + ++ K  + D + +QE+ +  A   +
Sbjct: 1   MKIITLNLNGIRA---------------ASRKGMLEWLKLENPDFICVQELKAQEADLTS 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +  F+S      +S     + I           +V     PL+          
Sbjct: 46  DMLNPYGYMGFFSYAVKKGYSGVGIYSKI-------SPLQQVNNTGVPLIDD-------E 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R A  +      +   ++ ++L S    +  +N       +  Q  + +   + +K   
Sbjct: 92  GRYAEFI-----FENFSIISLYLPSGSSGEERQN-------VKYQVLEDIMRILKKKISQ 139

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                + GDFN   +                     D           +  + K      
Sbjct: 140 TKYVAVCGDFNIAHHEIDLKNFKGNKKNSGFLPEERDWLSTLFSKLQWVDVYRKISPHTT 199

Query: 246 -NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +A     N+           IDY + +QN     +  S             + KR SDH
Sbjct: 200 EDAYTWWSNRGQAWVNNVGWRIDYQIANQNLANKALSASV-----------YKEKRFSDH 248

Query: 296 CPISIDYD 303
            P+ I+Y 
Sbjct: 249 APLIINYS 256


>gi|322377529|ref|ZP_08052020.1| exodeoxyribonuclease III [Streptococcus sp. M334]
 gi|321281729|gb|EFX58738.1| exodeoxyribonuclease III [Streptococcus sp. M334]
          Length = 275

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILEELFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   + +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDEFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|312867077|ref|ZP_07727287.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0405]
 gi|311097206|gb|EFQ55440.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0405]
          Length = 275

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAEDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILEELFPGYEKTWRSSQEPARKGYAGTMFLYKKELTPVVTFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDKFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +     + +  +        F           
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|323359561|ref|YP_004225957.1| hypothetical protein MTES_3113 [Microbacterium testaceum StLB037]
 gi|323275932|dbj|BAJ76077.1| hypothetical protein MTES_3113 [Microbacterium testaceum StLB037]
          Length = 340

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 76/284 (26%), Gaps = 49/284 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+++WN    +                     + Q+A ++ AD+V L E       
Sbjct: 101 ATSLRVMTWNTAGAATS----------------AESIAQFAVDMQADVVTLPETTIDTGT 144

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                +    +                    T + +R     +   S        S + +
Sbjct: 145 R--VAELMRDMGRPMWAHHAEYGVTGWGATSTTVLIR---PELGDYSVIDSSLDGSSNTS 199

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               AV + V  +G     + +   +    +     +      L+ Q             
Sbjct: 200 TVPSAVAMPVSGDGP----IIVAAHAVAPREDYMTQWRSDLKWLADQCA----------- 244

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDY 259
                ++AGDFN  I+++        T+                            PID+
Sbjct: 245 -SDNVILAGDFNATIDHMTGLGVDGGTLGRCRDTTSASGNGGVGTWPTDIPAILGAPIDH 303

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +   +   + +  S      +           SDH P+ +  +
Sbjct: 304 VMATPD---WTVSGSIVMRTLDGS--------GSDHRPVVVQLE 336


>gi|148653450|ref|YP_001280543.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1]
 gi|148572534|gb|ABQ94593.1| Endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1]
          Length = 341

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 90/317 (28%), Gaps = 47/317 (14%)

Query: 26  LVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           + + N+   +        ++   S          L Q  +N  ADI   QE+    A+  
Sbjct: 15  IATSNLLNFALPNRTYYANMDAYSQSEYQRKLNGLHQLLRNAKADIYAFQEVWDEKALQD 74

Query: 83  V-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----- 132
           +     F  +      ++    +   +        A+ +  K   +  Q           
Sbjct: 75  LAVKLGFEPSQVLAPMASNEPSSQLTKGKGAQDTPALGIISKFNVIDWQLLTNFDPLAVV 134

Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF----------------LDSLE 174
                   ++ NR  + + +++ G+ I V+  HLKS                        
Sbjct: 135 DIPDQGLYKSFNRPPLVVTLDVYGQPITVITAHLKSKRPQYIRDEAGGRVEDYNDPLLRV 194

Query: 175 NTYSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKINYLG------------NN 221
                S  + + +A  L+ + I +   +  P ++ GD N   + +             + 
Sbjct: 195 RAKLRSLCMRAAEAAALRLFMIDKLHNTRHPLILLGDMNDVTDSVTTQLLAETSEVIYDK 254

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY---KFLIQESFSEI 278
                 +     +             +        ID   + +      KF + E     
Sbjct: 255 SMRDVALFDAARVQTSYGWMRDVAYTHLYQGMPEVIDQLFVSEEFLVDGKFSLGEVERVD 314

Query: 279 LYNEDDIKSRGKRLSDH 295
            +N+   +    R SDH
Sbjct: 315 YFNDHLKQDYQDRYSDH 331


>gi|26986873|ref|NP_742298.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida KT2440]
 gi|148545402|ref|YP_001265504.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida F1]
 gi|24981475|gb|AAN65762.1|AE016202_5 conserved hypothetical protein [Pseudomonas putida KT2440]
 gi|148509460|gb|ABQ76320.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida F1]
          Length = 284

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 83/292 (28%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   + +     D D+V L
Sbjct: 28  PEDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHNGRAGNLQKIGRLLG--DFDLVAL 85

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE    +  +    +                  R+       +  V  +    L + +PL
Sbjct: 86  QEADGGSLRSGYVNQVEHLAHLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQLLEDHPL 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    + Q  +
Sbjct: 146 PGPAG-------RGAILVRFGEGEDALIVVMMHLALG-------------AKTRALQLGY 185

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N     L  +    + +      +              +
Sbjct: 186 IRELIGGY----RHQVLMGDMNTHATDLLEHSPL-RDLGLVAPQVEAT---------FPS 231

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++  +     ++     I              SDH P++++ 
Sbjct: 232 WRPQRCLDHILLSSSLTLERVEVLAQPI--------------SDHLPVAVEI 269


>gi|324991375|gb|EGC23308.1| exodeoxyribonuclease [Streptococcus sanguinis SK353]
          Length = 275

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 82/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  +ADI+ +QE     +    
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSASGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILTNLFPEYENTWRSSQEPARKGYAGTMFLYKKELTPIVTFPEIGAP-STMDVEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +        +      +  ++    L        +   
Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLARL--------DGQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNKY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|307180084|gb|EFN68152.1| Putative neutral sphingomyelinase [Camponotus floridanus]
          Length = 360

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/265 (11%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
             + + +   + + DI+ LQE+ S              I    + ++ +S    +  + +
Sbjct: 27  RMSAIAEKCASREYDIICLQEVWSVEDFK--------VIKAKVQEILPYSHYFYSGVVGS 78

Query: 113 AIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            + +  +        +                 G +      ++I    I V   HL + 
Sbjct: 79  GVCILSRYPIYDVMFHKWPLNGYVHKIHHGDWFGGKGVGLCKIKILNMNINVYTAHLHA- 137

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         +    QA     ++          ++AGD N +   L         
Sbjct: 138 ----EYNRENDEYMAHRVLQAFDTAQFVRMTSGGADAVILAGDLNTEPQDLAYRIIRGVG 193

Query: 228 IDPNDSLIRFPKEKDSRCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
              +           + C  N            +   ID+ +   +    +   +F   L
Sbjct: 194 GLMDACPSSASHIGTNECANNSYTCSKFARTRPDGKRIDHILYLGSKSVKVEITNFQHPL 253

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
              + +  +    SDH  +     F
Sbjct: 254 --PNRVPYKDFSYSDHEAVMATLKF 276


>gi|254452409|ref|ZP_05065846.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 238]
 gi|198266815|gb|EDY91085.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 238]
          Length = 290

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 81/296 (27%), Gaps = 38/296 (12%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +     +R+ ++N++ +    G +    SV         L+    +LDAD+V  QEM
Sbjct: 22  PVQSPSRDTLRVATYNVHYI--WLGRAQGDWSVGDWERRKGALQAAFVSLDADVVGFQEM 79

Query: 75  GS-------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            S        N       +       +                       +         
Sbjct: 80  ESFGRGQAPQNLTLDWLREQNPGYAAAAVGDPAVFPSTQPIFYRKDRLTLRDQGWFFFSD 139

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            P +    +F+ +          E  +G    V ++H +     +   +    +  +   
Sbjct: 140 TPDVIYSRTFNGSWPAFTSWAEFEDRDGTIFRVYNLHTEYRSMSNKQLSVALVAARIAEP 199

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            A+              P  + GDFN               ++  +      +   S  +
Sbjct: 200 AARM-------------PVFVIGDFNAIRGST-----TLGVLEDANVTFWPVQG--STFH 239

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N+ L     ID+              S           +  G+  +DH P+  D+
Sbjct: 240 FNRGLNLFPAIDHIGGSDGISPVGKTFSVR--------GRFDGEWATDHYPVVGDF 287


>gi|167566600|ref|ZP_02359516.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           oklahomensis EO147]
          Length = 526

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 79/254 (31%), Gaps = 30/254 (11%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75
           +R+ S+N+ N  +       + +   R   +Y         +    K L+AD++ L E+ 
Sbjct: 284 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKNYDEFVRQDAKIVSALKALNADVIGLMEIE 343

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +         +          R+++    R   + I  A+    + V+      P+  A 
Sbjct: 344 NDGYGELSAVRQLAAKLGDGWRVVDPGIARLGGDAISVALIYDSRKVK------PVGEAA 397

Query: 135 DSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP------SCSLLSQ 186
                  NR+ +          + + V   HLKS     +  +            +  ++
Sbjct: 398 TLAIDDKNRQPLAQTFRPVGGSRAVTVAVNHLKSKNCPSATGDDLDQGDGQGCWNATRTR 457

Query: 187 QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            A  + DW+ +          ++ GD N             +T++    +     +  + 
Sbjct: 458 AASKVADWLARTPTGVPSEGVLLIGDLNSYTYEDPV-----RTLESRGYVNLVSSKIGAG 512

Query: 245 CNANKNLRNKIPID 258
             +         +D
Sbjct: 513 AYSYVYNGEAGYLD 526


>gi|24649581|ref|NP_732965.1| twin, isoform A [Drosophila melanogaster]
 gi|24649583|ref|NP_732966.1| twin, isoform E [Drosophila melanogaster]
 gi|28572072|ref|NP_788732.1| twin, isoform F [Drosophila melanogaster]
 gi|17862252|gb|AAL39603.1| LD18435p [Drosophila melanogaster]
 gi|23172141|gb|AAF56259.2| twin, isoform A [Drosophila melanogaster]
 gi|23172142|gb|AAF56258.2| twin, isoform E [Drosophila melanogaster]
 gi|28381449|gb|AAO41599.1| twin, isoform F [Drosophila melanogaster]
 gi|220953408|gb|ACL89247.1| twin-PA [synthetic construct]
          Length = 552

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 94/343 (27%), Gaps = 63/343 (18%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           +    ++  ADI+ LQE+ +     
Sbjct: 192 FTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYH 251

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131
              P+     +       + +K  S  +       AI  R     ++++S          
Sbjct: 252 FFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMA 311

Query: 132 ---GAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              G+ +  +R   +      A+  + E   + +  +    +      +  +     C +
Sbjct: 312 NAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDV 371

Query: 184 LSQQAQWLKDWITQKKESLVP--------------FVIAGDFNRKINYLGN--------- 220
              Q   L + +    +                   ++ GDFN   +             
Sbjct: 372 KLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVS 431

Query: 221 ----------NDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMD 263
                          + +  ND+       K +           N     K  IDY    
Sbjct: 432 MDHLDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYT 491

Query: 264 QNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +        L   S   +  N+          SDH P+ ++ +
Sbjct: 492 KTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELE 534


>gi|71834576|ref|NP_001025390.1| sphingomyelin phosphodiesterase 2, neutral [Danio rerio]
 gi|68563437|dbj|BAE06149.1| Mg2+-dependent neutral sphingomyelinase [Danio rerio]
          Length = 420

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 88/306 (28%), Gaps = 46/306 (15%)

Query: 17  TASVAQKVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
                 K+R+ S N   I  LS+                 Y ++ +       DI  LQE
Sbjct: 2   APQQPGKLRVFSLNCWGIRFLSKL------------CAQRYEMIGELLGREQHDIALLQE 49

Query: 74  MGSYNAV----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           + S         K+   + +  ++ +  + +     S + I  A+  +            
Sbjct: 50  VWSERDFLFLKRKLSCSHPYTHYFKSGVIGSGLAVFSKHRIQDALLYQYSL-------NG 102

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      G + A  ++VE+ G K  V   HL +                    Q+ 
Sbjct: 103 YPYMLSHGDWFGGKAAGLVIVEVFGLKAHVYVTHLHA-----EYSRAQDGYLPHRIVQSW 157

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLG-----NNDDFWKTIDPNDSLIRFPKEKDSR 244
            L+ ++          ++ GD N   + LG     ++          D            
Sbjct: 158 ELQQFVRHTSHGADLVILGGDLNMHPSDLGNRLLRSHTGLRGCYTETDKFDGCEDGHTLI 217

Query: 245 CNANKN-------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            N +             I IDY +M  +    +  ES S    +  D        SDH  
Sbjct: 218 ANNHFTKKQDLIPFEKGIRIDYILMKGSQRVSVKCESLSTTKGSVSDKP---FPYSDHEA 274

Query: 298 ISIDYD 303
           +  D +
Sbjct: 275 LMADLN 280


>gi|325292791|ref|YP_004278655.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium
           sp. H13-3]
 gi|325060644|gb|ADY64335.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium
           sp. H13-3]
          Length = 267

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 74/276 (26%), Gaps = 50/276 (18%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNA------------------------VAKVFPKNTWC 90
             L  Y    D DI+ LQE+    A                        V +  P +   
Sbjct: 15  DELVPYISASDPDILCLQEVVHTPAAEEDWLSYRDDGRDLPQRANFLRDVEEALPDHLAI 74

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRAGNRRAVE 147
              +++  + H +    +    A  VRK    V Q     +    A        +R    
Sbjct: 75  FCPASQGDLWHGETRYPSQWGLATFVRKSIAIVAQAQGFVHGCFSANGYGDHPRSRTGHA 134

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           + V         +  H+         +            QA+ L   +    E     ++
Sbjct: 135 VRVFDFTTGQPAVIAHMH-----GLRDPNGKHDIPARLMQAKRLVKLVKDIAEDGDRIIV 189

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
            GDFN            +  +   D +        +    +   +     DY +++    
Sbjct: 190 CGDFNVLPESD-----TFTVLKELDLIELVTTRGFTDTRTSHYAKQNRFADYMLVNP--- 241

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       ++          +SDHCP+ I++ 
Sbjct: 242 ------VVQVDHFDVVRQPE----VSDHCPLLIEFS 267


>gi|152964513|ref|YP_001360297.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
 gi|151359030|gb|ABS02033.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
          Length = 344

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 79/291 (27%), Gaps = 61/291 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ ++N               +  R            +    D+V LQE+        
Sbjct: 104 DLRVATFNT--------------TNWRGAEGLE---DLLRRGRPDVVALQEVVPSQQRDY 146

Query: 83  --VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             VFP+  +  + ST    +              AV  K   V  +    L         
Sbjct: 147 AGVFPEYPYRSYTSTSTGGSREGD--------GDAVWSKYPIVSVEPVTGLPE------- 191

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCF-------LDSLENTYSPSCSLLSQQAQWLKD 193
           G R A  + +++ G+++ VL +HL S C          +       +  +   +A+   D
Sbjct: 192 GARPADVVTLDVEGRRLAVLSVHLASPCLLCSPDKVARNPAGNTGDAARVRVAEARRYAD 251

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                + S    V+ GD N         +     +      +          +       
Sbjct: 252 LARSLQASGAAVVLGGDLNSAEFNEPLRELRSHGLVDVHRAVGTRPGLTRGASPGF---- 307

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +D  ++                      +  R    S H P+  D  +
Sbjct: 308 -ARVDVVLV---------------AGLEPVAVAERAPGGSTHSPVVADLAW 342


>gi|225714724|gb|ACO13208.1| Deoxyribonuclease gamma precursor [Esox lucius]
          Length = 266

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 82/282 (29%), Gaps = 25/282 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +++ S+NI    +                   +L +     D  +V L+E+  + +AV K
Sbjct: 1   MKIASFNIQRFGKH---------KLSDPQILAILVKIVSRYDM-LVVLEEVDANGSAVKK 50

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +           +   ++   +      + + ++N+  L  S+     +     A  
Sbjct: 51  FLEELNKANKEHRYTMQVSTRLGRDTYKEQYLFLYRENMVELVGSWQYEDKQPGDEDAFA 110

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    L      K ++ +   L         E++      L     +  K W        
Sbjct: 111 REPFILRF----KCLYTVLEDLVMIPVHTKPEDSVKELDKLYDVFLEVKKKW------KT 160

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              +  GDFN   +Y+         I  +        +       N N      I   V 
Sbjct: 161 DNVMFLGDFNADGSYVSAKRMKTIRIRSDKHFHWLIADDVDTTANNSNDYTYDRI--VVY 218

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
             +    ++  S     +      +     ++SDH P+ +  
Sbjct: 219 GDDMLDAVVPNSAKPFNFQNAYGLNDTGTLKVSDHYPVEVVL 260


>gi|293365984|ref|ZP_06612686.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037]
 gi|291315527|gb|EFE55978.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037]
          Length = 275

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +  ++ +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFEEFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHLHGDVPECY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIE 274


>gi|158315736|ref|YP_001508244.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
 gi|158111141|gb|ABW13338.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
          Length = 470

 Score = 75.4 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/345 (12%), Positives = 88/345 (25%), Gaps = 72/345 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK---------------RTTSDYTLLRQ 59
           P    V +++ + ++N+   ++   +    +  +                  +    + +
Sbjct: 108 PPDGPVTKQLTVNTYNLYLGADLTPIVTAPDQQEMINQARIAYEHVLWADFPARAQAIAK 167

Query: 60  YAKNLDADIVFLQE----------------MGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
                  D++ LQE                +     + K   +       + E      +
Sbjct: 168 LLARQRPDVLGLQEVALWQEGPIGGPLRTTVDYLPILQKALKERGLNYEVAAENTNFSGQ 227

Query: 104 ------RDSNNDIHTAIAVRKKNVRVLQQSYPLLG--------AKDSFSRAGNRRAVELL 149
                 R      H AI VR       Q S+P              +      R    + 
Sbjct: 228 LPISATRQVRFTDHDAILVRTGIPGRWQVSHPESHEYVARLTLPTAAGPFTITRGWSAVD 287

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
           V   GK + V + HL+                 + + QA  L   +     +  P ++ G
Sbjct: 288 VTARGKTVRVANTHLEPVSP------------QVRNAQANELYSAL---VTATRPVILLG 332

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK------NLRNKIPIDYFVMD 263
           D N + + L      +                D    A +             IDY +  
Sbjct: 333 DLNSQPSDLTGPYGLFTQ-GGYTDAWATIHGPDGGFTATQIELDVMPSTLDRRIDYVLYQ 391

Query: 264 Q-----NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +  + +     + I     D    G   SDH  +     
Sbjct: 392 PTRPEHSDLEQVRAARATVIGNKLRDRTPSGLWPSDHAGVVAALT 436


>gi|332971475|gb|EGK10427.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. 1501(2011)]
          Length = 342

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 87/317 (27%), Gaps = 47/317 (14%)

Query: 26  LVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           + + N+   +             +  +     T L +  KN  +DI   QE+    A+  
Sbjct: 16  IATSNLLNFALPNRSYYANMQPYTDHQYQKKLTGLYELLKNAKSDIYAFQEVWDEKALQD 75

Query: 83  VF----PKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLLG----- 132
           +      + +  +        + +         T A+ +  K+  +  Q           
Sbjct: 76  LAVKLGFEPSQVLAPVASNDPSSALTAGRGAQDTPALGIISKHKVLEWQLLTDFSDLAVI 135

Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF----------------LDSLE 174
                   +  NR  +   +E+ G+ I V+  HLKS                        
Sbjct: 136 DIPDVGLYKRFNRPPLVATIEVYGQPITVITAHLKSKRPHYLRDEQGNRLEDYDDPLLRV 195

Query: 175 NTYSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKIN----------YLGNNDD 223
                S  + + +A  L+ + I     +  P ++ GD N   +               D 
Sbjct: 196 RAKLRSLCMRAAEAAALRLFMIDILHNTRHPLILLGDMNDVTDSVTTQLLAETSEVIYDK 255

Query: 224 FWK--TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY---KFLIQESFSEI 278
             +   +     +             +        ID   + +      KF + E     
Sbjct: 256 AMRDVALFDAARVQTSYGWMRDVAYTHLYQGMPEVIDQLFVSEEFLVDGKFSLGEVERVD 315

Query: 279 LYNEDDIKSRGKRLSDH 295
            +N+        R SDH
Sbjct: 316 YFNDHLKHDYEDRYSDH 332


>gi|239611388|gb|EEQ88375.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis
           ER-3]
          Length = 330

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 28/303 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  +RL+S+NI   +   G    K   +R  +  T +       D   V +QE+ 
Sbjct: 36  PFPNKSLSLRLMSFNIRYGANPSGN--EKAWSERRGNLITQVAYEMGANDNVFVGMQEVL 93

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130
                  V   N        +       RD       ++ I  RK     ++        
Sbjct: 94  HNQLEDVVNGLNNHPSSGGKDWTYIGVGRDDGKQRGEYSPILYRKSLWEPIETDTKWLSE 153

Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                     A NRR V + V  + +   ++ +                   +     ++
Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRHKRTRALVLVMNTHL---------DHQVSAARLHGSE 204

Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +   I   K+           ++ GDFN +             I  + +     K    
Sbjct: 205 LILKLIGDYKKKREYTCRITGVMLTGDFNSEEGQEAYQVVTESKIMVDPAKTLGDKHIYG 264

Query: 244 RCNANKNLRN---KIPIDYFVM-DQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298
                    +      +DY  + D N  ++  + ++    Y    +        SDH  +
Sbjct: 265 HRKTFTGFNSEVGLSRLDYVFVGDGNLCRWGDKGTWGVNRYAVLPNKFDDDVFFSDHRAV 324

Query: 299 SID 301
             D
Sbjct: 325 VAD 327


>gi|325922580|ref|ZP_08184334.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
 gi|325546930|gb|EGD18030.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
          Length = 255

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 89/295 (30%), Gaps = 60/295 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70
           AS ++ +R+++ NI   S     S +               +    + + A     DIV 
Sbjct: 3   ASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLAGER--DIVG 60

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           LQE    +  +    +  +    +     +H   R       +A  +  K   +  Q + 
Sbjct: 61  LQEADPGSLRSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLQPLEVQDHA 120

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L G      R G R  +          + V   HL                 +    Q  
Sbjct: 121 LPG------RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLA 161

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247
           ++ + +++   +    ++ GDFN   +                 L R  + +   C  + 
Sbjct: 162 FIAELLSEHPNA----MLMGDFNCMADRPEMQA-----------LYRHTRLQPPSCEVHT 206

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + R    ID+ ++  +                 + I++     SDH  + +D 
Sbjct: 207 FPSWRPDRAIDHILVSDSL--------------TIERIEAIPAAFSDHLAVGMDI 247


>gi|288574157|ref|ZP_06392514.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569898|gb|EFC91455.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 242

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 81/285 (28%), Gaps = 51/285 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWK----NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +RL+ +N+   +              + +R+T  +  +  Y  NL  DI+ L E+   + 
Sbjct: 1   MRLILYNVRYGTGTGLSYHVPAPFSGNFRRSTGRFKRITDYLMNLSPDIIGLVEVDGGSY 60

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-GAKDSFS 138
                  N      ++    +H      ++  + + V +     +    P +        
Sbjct: 61  RH---GGNCQAETAASSMGGHHRFAVKYSERISRLPVLRSQGNAIVSRLPPIKTDCHDLG 117

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R   R A+E+          ++ +HL                      Q + L+D     
Sbjct: 118 RGMKRNALEV----AYGDFSLILVHLSLGS-------------RSRRHQIRALRDL---C 157

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P ++AGD+N               +                       R +  +D
Sbjct: 158 SARERPLILAGDYNTLSGPEE-----LAPLRETGMASVNELGLP----TYPCRRPRKELD 208

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + ++ +                +         R SDH P+  D +
Sbjct: 209 FVLISEEI--------------STKGFFIPDVRFSDHLPLICDLE 239


>gi|71660781|ref|XP_822104.1| MP99 [Trypanosoma cruzi strain CL Brener]
 gi|49096010|gb|AAR10848.2| MP99 [Trypanosoma cruzi]
 gi|70887497|gb|EAO00253.1| MP99, putative [Trypanosoma cruzi]
          Length = 914

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 95/314 (30%), Gaps = 41/314 (13%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLDADIV 69
           ++P        +R+++WN+   +   G             T + Y  L +  + LDAD++
Sbjct: 615 VLPTPTEELSTLRVLTWNVQ-FNRHSGERTPLGRDGIDWCTPTRYIALAKTMETLDADVI 673

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            +QE+              WC +   ++ +      S N+     A+R   V +L + + 
Sbjct: 674 SMQEVE-----------PAWCKYLCEQQWVRERYALSCNEDSH--AIRPWGVMLLVKRHL 720

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            +      + A       +   +    I V      +   L  L      + S  + Q +
Sbjct: 721 RVEGMHHANVAAFAGHTSV---MPEVTITVSKNVPVTIGSLHLLAPYNKNNVSNRTTQLE 777

Query: 190 WLKDWITQKKESLVPF---VIAGDFNRKINYLGN------NDDFWKTIDPNDSL---IRF 237
            L   +  +  +       ++ GDFN   N            D W  ++P ++       
Sbjct: 778 NLTKRMRARPSAGGVSTGAIVMGDFNDYANNYFTFPPELGFKDAWSLLNPENNKNEGYTI 837

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE---------DDIKSR 288
             +++               D  +      + +  E                  D     
Sbjct: 838 DGDRNPYAGQIIEREFFGRADRVLFASRHLQPIHAELVGTTSVRALGITKQVNCDKAVPE 897

Query: 289 GKRLSDHCPISIDY 302
               SDH  + +++
Sbjct: 898 YLYPSDHFGLLVEF 911


>gi|71018595|ref|XP_759528.1| hypothetical protein UM03381.1 [Ustilago maydis 521]
 gi|46099016|gb|EAK84249.1| hypothetical protein UM03381.1 [Ustilago maydis 521]
          Length = 300

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/304 (9%), Positives = 80/304 (26%), Gaps = 38/304 (12%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V    +    +  V+ N+  L      +   +      ++  ++       D D++ +QE
Sbjct: 19  VSTAPTSMGSLTAVTMNVAGLPAFINGNGAADKK----ANSIMIGNKFAQYDYDLINVQE 74

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLG 132
             +            +  +        +    S      + +                  
Sbjct: 75  DFN------------YHAYIYDNDDHPYRTPTSGGVPFGSGLNTLSTIPFKDLSRVKWEK 122

Query: 133 AK-DSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              +       +    + V +  G ++ + ++H+ +           S    +    A  
Sbjct: 123 CNLNEGDCLTPKGYTVVTVTLPTGGELDLYNLHMDAGSDDGDSSARTSNFEQVARAIA-- 180

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNND----------DFWKTIDPNDSLIRFPKE 240
                ++   +    ++ GD N +     +N           D W  +            
Sbjct: 181 -----SRSDAAGRAVIVMGDTNSRYTRPKDNLLSFLSKTGLVDTWVELVRGGKPPASTDA 235

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +      N   +D       +   L   ++       +   + G  L+DH PIS+
Sbjct: 236 ALLCADPIPTSNNCEVVDKVFYKNGSKVTLKPSTWQ--YLATEFTDATGNPLADHTPISV 293

Query: 301 DYDF 304
            + +
Sbjct: 294 QFTY 297


>gi|261205322|ref|XP_002627398.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis
           SLH14081]
 gi|239592457|gb|EEQ75038.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis
           SLH14081]
          Length = 330

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 85/303 (28%), Gaps = 28/303 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  +RL+S+NI   +   G    K   +R  +  T +       D   V +QE+ 
Sbjct: 36  PFPNKSLSLRLMSFNIRYGANPSGN--EKAWSERRGNLITQVAYEMGANDNVFVGMQEVL 93

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130
                  V   N        +       RD       ++ I  RK     ++        
Sbjct: 94  HNQLEDVVNGLNNHPSSGGKDWTYIGVGRDDGKQRGEYSPILYRKSLWEPIETDTKWLSE 153

Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                     A +RR V + V  + +   ++ +                   +     ++
Sbjct: 154 TPDVPSYGWGATSRRIVTIGVFRHKRTRALVLVMNTHL---------DHQVSAARLHGSE 204

Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +   I   K+           ++ GDFN +             I  + +     K    
Sbjct: 205 LILKLIGDYKKKREYTCRITGVMLTGDFNSEEGQEAYQVVTESKIMVDPAKTLGDKHIYG 264

Query: 244 RCNANKNLRN---KIPIDYFVM-DQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298
                    +      +DY  + D N  ++  + ++    Y    +        SDH  +
Sbjct: 265 HRKTFTGFNSEVGLSRLDYVFVGDGNLCRWGDKGTWGVNRYAVLPNKFDDDVFFSDHRAV 324

Query: 299 SID 301
             D
Sbjct: 325 VAD 327


>gi|255578467|ref|XP_002530098.1| ap endonuclease, putative [Ricinus communis]
 gi|223530409|gb|EEF32297.1| ap endonuclease, putative [Ricinus communis]
          Length = 486

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 86/314 (27%), Gaps = 84/314 (26%)

Query: 17  TASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
              +A+    V+L+SWN+N L     +  +               + A+  + D++  QE
Sbjct: 227 PPPLAEDTKFVKLMSWNVNGLRALLKLEGFSA------------VELAQRENFDVLCFQE 274

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                          +   + T               ++  A+  +   +       +  
Sbjct: 275 TK--------LQAKGYENSFWTCSHSKLG--------YSGTAIVSRVKPLSVSYGLGIAD 318

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW-LK 192
            DS  R          V       ++L+ ++ +               S    Q    L 
Sbjct: 319 HDSEGRL---------VTAEFDSFYLLNAYVPN-------SGDGLKRLSYRVSQWDLSLS 362

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRF 237
           +++ + ++S  P ++ GD N     +   +      +                    +  
Sbjct: 363 NYMKELEKSK-PVILNGDLNCAHQEIDIYNPAGNRRNAGFTDEERQSFETNFLSRGFVDS 421

Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
            +++            +           +DYF++ ++    +            D     
Sbjct: 422 FRKQHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSESISDQVH-----------DSYIVP 470

Query: 289 GKRLSDHCPISIDY 302
               SDHCPI +  
Sbjct: 471 DVTGSDHCPIGLVL 484


>gi|134045625|ref|YP_001097111.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C5]
 gi|132663250|gb|ABO34896.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C5]
          Length = 249

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N +                         + K    D++ +QE    +     
Sbjct: 1   MKMLSWNVNGIRACLKNGFM---------------DFLKRESPDVMCIQETKVQSG-QVQ 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++      +S       I     +               G K+S      R
Sbjct: 45  LGLDGYFQYWNYAERKGYSGTAVFTKIKPNEVI--------------YGIKNSEHNGEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + ++++++  +     +                + L+        +  
Sbjct: 91  -----VITLKFDEYYLVNVYTPNSQRGLTRLKYRQKWDQDFLNYVKTLE--------NKK 137

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P +  GD N                           F   ++           K+    +
Sbjct: 138 PVIFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERKGFDNIVNSGFLDTFREFNKEPDNYS 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R           IDYF + ++    L            D         SDHCP+ I
Sbjct: 198 WWSYRFNARARNIGWRIDYFCISESLRNNLK-----------DAFIMSEIMGSDHCPVGI 246

Query: 301 DYD 303
            +D
Sbjct: 247 IFD 249


>gi|327306001|ref|XP_003237692.1| DNA lyase [Trichophyton rubrum CBS 118892]
 gi|326460690|gb|EGD86143.1| DNA lyase [Trichophyton rubrum CBS 118892]
          Length = 603

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 83/340 (24%), Gaps = 79/340 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +RL +WN+N +        W+ +                 L+ADIV  QE  +   +   
Sbjct: 3   LRLTTWNVNGIRNPFSYEPWRGN--------RTFGTMFDILEADIVVFQEAKIQRKDLQD 54

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR-------------KKNVRVLQQS 127
            +   + W  ++S   +   +S            A+R              K       +
Sbjct: 55  DMVLVSGWDCYFSLPRQKKGYSGVVIYTRSSKCSAIRAEEGVTGALCPPSSKTPFRQLSA 114

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
              +G   S  +      V+ ++  +  +  +L+        +    +            
Sbjct: 115 SEQIGGYPSIEQMEELSEVDPIIVDSEGRCLILEFPAFVLIGVYCPADRDETRDDFRLGF 174

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNR---KINYLG------------------NNDDFWK 226
              L+  +    +     ++AGD N     I+                          + 
Sbjct: 175 FNLLEVRVRNLVKMGKRVILAGDLNTCAGPIDSAPALERIRKGTETEEEYLSYPARLIFN 234

Query: 227 TIDPNDSLIRFPKEK--------------DSRCNANKNLR---------NKIPIDYFVMD 263
            +           +                 R                     IDY +  
Sbjct: 235 RLVRPVGSTADTHDTETPPVLRDLCREFHPGRTGMYTCWNQKVNARPGNYGSRIDYILCS 294

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            N   + ++ +              G   SDHCP+     
Sbjct: 295 DNIRSWFVESNIQ-----------EGLMGSDHCPVYASIS 323


>gi|322709123|gb|EFZ00699.1| Endonuclease/Exonuclease/phosphatase family protein [Metarhizium
           anisopliae ARSEF 23]
          Length = 320

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 78/293 (26%), Gaps = 26/293 (8%)

Query: 20  VAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
               VRLVS+NI    +E E     +    R     + +R      ++  V LQE  S  
Sbjct: 40  ATMPVRLVSFNIRYAANEDERSLAEQPWNVRCPKVCSQMRFITAGHESPFVCLQESLSSQ 99

Query: 79  AVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                   +           I         +   + +  R             L      
Sbjct: 100 L------NDIQAELGEPWAHIGRGRGEGEADGEFSPVFYRSDAWACEVSETRWLSKTPEK 153

Query: 138 SRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              G   A+   + + +   +     + + S  F          S  LL + A    +W 
Sbjct: 154 PSRGWDAALNRIVTIGLFSHRANGTKVVVMSTHFDHIGVEARKNSAKLLIKFA---NEWS 210

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN----- 250
             K       +I GDFN + +              +D     P+ +    +         
Sbjct: 211 HGKGVPPSVVLIGGDFNSETDDEAYRMMTAPGSGMSDISDLVPERRHYGNHLTYTSFGEP 270

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDY 302
             +   ID+  +           +     +    +      R SDH PI  D 
Sbjct: 271 NEHPQRIDFLFI-------QEPRTAHVETFGVLANSFDDQIRFSDHRPIVSDL 316


>gi|45361461|ref|NP_989307.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus
           (Silurana) tropicalis]
 gi|39794455|gb|AAH64266.1| hypothetical protein MGC76280 [Xenopus (Silurana) tropicalis]
 gi|51703687|gb|AAH80950.1| hypothetical protein MGC76280 [Xenopus (Silurana) tropicalis]
 gi|89267865|emb|CAJ83004.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus
           (Silurana) tropicalis]
          Length = 316

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 81/302 (26%), Gaps = 73/302 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ SWN+      +G+  W                + +  D  I+ LQE+     +  
Sbjct: 60  TLKISSWNV------DGIRAWIKKQG---------LNWVREEDPHIMCLQEIKCAEKLLP 104

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              K+     +      +  +  S       +A+  K+  +       +   D   R   
Sbjct: 105 PEIKDMPEYPHKYWACPDEKEGYS------GVAMLCKDKPLNVTYGIGIEEHDKEGR--- 155

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++       +++  ++ +        +             + L        +S 
Sbjct: 156 ------VITAEFDSFFLIAAYVPNSSRGLVRLDYRQRWDVDFRAYLKGL--------DSK 201

Query: 203 VPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N                   +       +  +     L  F +    + +A
Sbjct: 202 KPLILCGDLNVAHQEIDLKNPKTNKKTPGFTPQERQGFGELLAEGYLDSFRELYPDKPSA 261

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DYFV+ +     L        +             SDHCPI
Sbjct: 262 YTFWTYMMNARAKNVGWRLDYFVLSKALRPALCDSKVRSKI-----------MGSDHCPI 310

Query: 299 SI 300
           ++
Sbjct: 311 TL 312


>gi|68472623|ref|XP_719630.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
 gi|68472882|ref|XP_719506.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
 gi|46441327|gb|EAL00625.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
 gi|46441456|gb|EAL00753.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
 gi|238881882|gb|EEQ45520.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 303

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 93/311 (29%), Gaps = 19/311 (6%)

Query: 1   MIRKYVLALV---FFLVPCT-ASVAQKVRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYT 55
           M+ + V  ++     ++  +  + A  + + S N+   + + G    +     R      
Sbjct: 1   MLSRVVFIILHWTLLVLADSRTTSALDITIYSNNVRYAASRRGRGRDELPWKIRKHGVVD 60

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--IHTA 113
            ++     +D  ++ LQE+        +   N                RD+ +    ++ 
Sbjct: 61  AIKSQ-SGVDPILIGLQEVTHAQLKDILKGLNKKNSEDDRRWTFFGVGRDNGHKKGEYSP 119

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           I        +L  +Y  L             A +  +   G    V    + +F      
Sbjct: 120 ILYNTAEWNLLNGTYKWLSFTPDKPSKYP-GASKKRIVTMGTFSHVKTGKVVNFVNTHLD 178

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 S       A+ +  +I     +  P  + GDFN  ++       F   +     
Sbjct: 179 H----RSVKSREYSAKLIIQYIKS-IPNYFPTFLCGDFN-SLDTDKAYATFSHYMVDASH 232

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRL 292
           +     + + +  +         ID+     +          + + Y   D++   G R 
Sbjct: 233 VAEKKYDTNLKTFSGFGNGTSYSIDFIW---SPMDTNDNSGTNALSYTVLDNLFDEGHRF 289

Query: 293 SDHCPISIDYD 303
           SDH P+   Y 
Sbjct: 290 SDHRPVMARYS 300


>gi|299147224|ref|ZP_07040289.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
 gi|298514502|gb|EFI38386.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
          Length = 341

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 91/343 (26%), Gaps = 59/343 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++ L    +    +  Q+       +  +N+  L +        +           
Sbjct: 1   MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           +  +  +    + +    L  D       I+ + E+ +Y  +  +  +            
Sbjct: 61  NTMKYKAKLKNMSEILSLLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQ 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H + +    +  A     K   +      +     + +    R  +     I  +K+ 
Sbjct: 118 YVHYEGEDQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIADEKMH 176

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  H  S           SP+     +Q + +KD +  +++S    VI GD N      
Sbjct: 177 FIVNHWPSR-------AAASPARERAGEQVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 228

Query: 219 GNNDDFWKTID-----PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271
                           P D    +                    D  V   N        
Sbjct: 229 SMAVALGAKRKPVDAGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 288

Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297
            + +   +++ D +  +  +                  SDH P
Sbjct: 289 LKFYKHEIFSRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 331


>gi|118445216|ref|YP_891186.1| hypothetical protein BALH_p0037 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118419777|gb|ABK88195.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 344

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 96/352 (27%), Gaps = 72/352 (20%)

Query: 3   RKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTS------- 52
           +K    L     P  + + +    + +++WN+   ++   + L     +   +       
Sbjct: 9   KKCCRRLFPAFPPAVSPIPEPQGPLTIMTWNLYLGADFTPLVLATTQAELRQAVTEVFRQ 68

Query: 53  --------DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW--------------- 89
                       + +       DI+ LQE   +          T+               
Sbjct: 69  FLATNFPIRVETIARQIVLKKPDIIGLQEAELWQLFVPGLQTVTYDFVKLLLSELKKMGL 128

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-------- 141
               +     N  +  S+         R   +   +  + ++  +++   A         
Sbjct: 129 HYEVAALNENNSVQLPSSTGNIVGFLDRDVILIRKESGFKVIQKQEANFEAKLTILVGGQ 188

Query: 142 ----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R    + V  NG+   V++ HL+                     Q     + +T 
Sbjct: 189 PFTIPRGWSSIDVSANGRIFRVINTHLEPLSPP---------------VQVAQGNELLTG 233

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKN 250
              + +P ++ GD N   N  G    +   I+     +     +             N  
Sbjct: 234 PANTNLPLILLGDLNSNANGTGT-PTYGNFINAGFQDVWIEVGEGQGFTCCQDSDLLNAA 292

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ +  +N +  ++ +   E    + D  S     SDH  +    
Sbjct: 293 SSLNRRIDFILF-KNGWNPIVADLVGE---EQQDRTSTALWPSDHAGVVASL 340


>gi|327348603|gb|EGE77460.1| endonuclease/exonuclease/phosphatase [Ajellomyces dermatitidis ATCC
           18188]
          Length = 330

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 85/303 (28%), Gaps = 28/303 (9%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  +RL+S+NI   +   G    K   +R  +  T +       D   V +QE+ 
Sbjct: 36  PFPNKSLSLRLMSFNIRYGANPSGN--EKAWSERRGNLITQVAYEMGANDNVFVGMQEVL 93

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPL--- 130
                  V   N        +       RD       ++ I  RK     ++        
Sbjct: 94  HNQLEDVVNGLNNHPSSGGKDWTYIGVGRDDGKQRGEYSPILYRKSLWEPIETDTKWLSE 153

Query: 131 -LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                     A NRR V + V  + +   ++ +                   +     ++
Sbjct: 154 TPDVPSYGWGATNRRIVTIGVFRHKRTRALVLVMNTHL---------DHQVSAARLHGSE 204

Query: 190 WLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +   I   K+           ++ GDFN +             I  + +     K    
Sbjct: 205 LILKLIGDYKKKREYTCRITGVMLTGDFNSEEGQEAYQVVTESKIMVDPAKTLEDKHIYG 264

Query: 244 RCNANKNLRN---KIPIDYFVM-DQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPI 298
                    +      +DY  + D N  ++  + ++    Y    +        SDH  +
Sbjct: 265 HRKTFTGFNSEVGLSRLDYVFVGDGNLCRWGDKGTWGVNRYAVLPNKFDDDVFFSDHRAV 324

Query: 299 SID 301
             D
Sbjct: 325 VAD 327


>gi|320536290|ref|ZP_08036333.1| exodeoxyribonuclease III [Treponema phagedenis F0421]
 gi|320146850|gb|EFW38423.1| exodeoxyribonuclease III [Treponema phagedenis F0421]
          Length = 258

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/310 (10%), Positives = 81/310 (26%), Gaps = 84/310 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77
           + ++SWN+N +   E                     +  N   DI+ LQE+ +       
Sbjct: 2   LNIISWNVNGIRAVEKKGF---------------ADWLYNESPDILCLQEIKARKEQVSG 46

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             +A V+   T+  F+   +   +S                       +           
Sbjct: 47  ELLAPVWEGGTYKTFWQPAKRPGYSGTALFTKKEPDNIRIMDLEEFDSEGR--------- 97

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                      ++  +  K+ V+  +  +     +        C         ++++   
Sbjct: 98  -----------VIAADFGKLTVISAYFPNSQDAGARLAYKLEFC-------AAMREFCDN 139

Query: 198 KKESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
            ++     ++ GD+N                   YL    ++         +  F     
Sbjct: 140 LQKEGQDVILCGDYNIAHKPIDLANPKTNEKNPGYLPEEREWMDVFTGAGYVDTFRHFCA 199

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +       +           IDY  ++++    +      + ++            S
Sbjct: 200 EPEH-YTWWTYRFKARERNVGWRIDYHCVNEDFLPKVKSSIILKDVF-----------GS 247

Query: 294 DHCPISIDYD 303
           DHCPI +   
Sbjct: 248 DHCPIKLSVS 257


>gi|296135801|ref|YP_003643043.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12]
 gi|295795923|gb|ADG30713.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12]
          Length = 267

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 68/305 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ + N+N +       +      +                 D++ +QE+       K
Sbjct: 5   PLRVTTLNLNGIRSAANKGVDDWLRSQAR--------------PDVLCVQEL-------K 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               +      +   L   + + +    ++ + +  K+     +    +G   +   A  
Sbjct: 44  ALEADMTPGLRTLGGLHGAAFQHAEKPGYSGVGLYWKHEPDDVR----IGFGHAEFDAEG 99

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +     G ++ ++  +  S    +  +       +   +    L        ++ 
Sbjct: 100 RYVEAIYKRPGGGRLSIVSAYFPSGSSSEERQQAKFRFLADFYEHLLAL--------KAA 151

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              ++ GD N                             + ID    +  F +   +  +
Sbjct: 152 GEVLLCGDVNIAHKEIDLKNWKGNLKNSGFLPEERAWMTRLIDEAGYVDVFRQLDPAP-D 210

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +           +S               +R SDH P
Sbjct: 211 RYTWWSNRGQARAKNVGWRIDYHLATPGIAAQAKSDSAWIYT---------EQRFSDHAP 261

Query: 298 ISIDY 302
           ++IDY
Sbjct: 262 LTIDY 266


>gi|322391715|ref|ZP_08065182.1| RgfB protein [Streptococcus peroris ATCC 700780]
 gi|321145425|gb|EFX40819.1| RgfB protein [Streptococcus peroris ATCC 700780]
          Length = 272

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + LL Q     + D++  QE+      ++V     +    S                
Sbjct: 17  EEKFQLLLQDIFENNYDLICFQEINQEITSSQVDAGPFYFPLPSAEPIHQDHYVRLLVEQ 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LAEKGLKYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              + GK++ V  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETVVEGKELAVASVHLSWWGKGFQEEWARFEAV------LKELNK----------PLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-----NKNLRNKIPIDYFVMD 263
           GDFN      G        ++  D+     + + S          K     + IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLELQDAFEVAKERRGSYTVPPEIDGWKGNSEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ++               +      +  ++SDH  +  +  +
Sbjct: 239 KD---------IQIESLHVVFDGKQNPQVSDHYGLQAELSW 270


>gi|255721545|ref|XP_002545707.1| hypothetical protein CTRG_00488 [Candida tropicalis MYA-3404]
 gi|240136196|gb|EER35749.1| hypothetical protein CTRG_00488 [Candida tropicalis MYA-3404]
          Length = 350

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 93/335 (27%), Gaps = 49/335 (14%)

Query: 3   RKYVLAL----VFFLVPCTASVAQK-----------VRLVSWNINTLSEQEGVSLWKNSV 47
           RK  LA+    +F  +     + Q            +R+ + NI   ++       +   
Sbjct: 25  RKLFLAIIFPVLFLALIIVTILIQSSKMDLDATPLLLRIYTNNIRFDNKGHPDKYEQPWE 84

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
            R       ++ +     A+I+ LQE+     +  +         +S   +     + S 
Sbjct: 85  IRKIQSVNSMQFHTTQGHANIICLQEVLHNQ-LQDILNGLNEFEEWSYFGVGRTDGKTSG 143

Query: 108 NDIHTAIAV-RKKNVRVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDI 162
              +  I   + +   +  +++ L    D     +  A  R    +  +         ++
Sbjct: 144 --EYAPILYKKSEFDILDSKTFWLSPTPDKPSKGWDAALERIVTVVTFQSKSSPSIRFNV 201

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
               +            S       A  LK++      +  P  +AGD N +     ++ 
Sbjct: 202 FNTHY--DHRGVVARRESS---LFIADKLKNY------NEYPSFLAGDLNTEPTDEPHSI 250

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLR---NKIPIDYFVMDQNAYKFLIQE------ 273
                   +  LI          +     +       IDY     +   F +        
Sbjct: 251 LESSGFKDSFKLIGKKYSYGYNTSFTGFDKDNEPVSRIDYIW-SPSYTTFDVGHESSKDE 309

Query: 274 -----SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  S   +        G   SDH P+   Y+
Sbjct: 310 ASNRFGVSLKSFGIVSNWFNGNFFSDHRPVVATYE 344


>gi|206895175|ref|YP_002247534.1| exodeoxyribonuclease III [Coprothermobacter proteolyticus DSM 5265]
 gi|206737792|gb|ACI16870.1| exodeoxyribonuclease III [Coprothermobacter proteolyticus DSM 5265]
          Length = 250

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/301 (9%), Positives = 80/301 (26%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                   +    + +  +    D++ LQE+   N +   
Sbjct: 1   MKVATFNVNG----------------IRARLDSISELMQMEAPDVLCLQEIKCENDL--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +  +   ++    +    +  +++  +   V       + ++         
Sbjct: 42  ---------FPYDFFKDYQCYVNGQKAYNGVSICSRKEGVPVVVLEEVESR--------- 83

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +      +++++          +   SP      Q  +     + +      
Sbjct: 84  -----TLGLVLGDTLIVNVYAPHG------DLRGSPRFFQKIQWYKAFSKRMEELLRRYP 132

Query: 204 PFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN  +                      +  K +     +  F +         
Sbjct: 133 KVLIVGDFNIALKDNDVWDPILLKDTVGTFPEEREALKALLSVGFVDVF-RAIYPEKVQF 191

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY    +         S  ++   E+  K R  + SDH P+ 
Sbjct: 192 TWWDYRQGRMWKNQGMRIDYVFSSETLMP-----SIEDVYVVEEIRKRRNPKPSDHAPVV 246

Query: 300 I 300
            
Sbjct: 247 C 247


>gi|154491892|ref|ZP_02031518.1| hypothetical protein PARMER_01519 [Parabacteroides merdae ATCC
           43184]
 gi|154088133|gb|EDN87178.1| hypothetical protein PARMER_01519 [Parabacteroides merdae ATCC
           43184]
          Length = 373

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 82/305 (26%), Gaps = 64/305 (20%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                ++++++N+     +       N           + +Y  N  ADIV LQE     
Sbjct: 102 PKENVLKVLTYNVMGFGYKGHTEDAPNP----------IIRYIANSGADIVCLQEYAVGT 151

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +   +  +                   S       IAV  K      +      + +  S
Sbjct: 152 SKNFLTNQKIANALKMYRYRSIIPIGTSGTLKFN-IAVFSKYPISKSRKIKYDSSFNGSS 210

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-------------------- 178
                      ++I GKK+ +++ HL+SF       + YS                    
Sbjct: 211 IHE--------LDIRGKKLTLINNHLESFKLTMEDRSHYSAFIKNLNSETLDGLRSSIEQ 262

Query: 179 ---PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
              P+  + ++QA+ + + I +        ++ GDFN       +               
Sbjct: 263 KLGPAFRIRARQARAVAEEIKKI--DTDYVLVCGDFNDTPISYAHRTI------QGPLKD 314

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +                   ID  +   N                  +      R SDH
Sbjct: 315 AYAASGRGVGVTYNENFFWFRIDNILHSANMKP--------------INCTVDKVRYSDH 360

Query: 296 CPISI 300
            P+  
Sbjct: 361 YPLWC 365


>gi|118591884|ref|ZP_01549279.1| Endonuclease/exonuclease/phosphatase family protein [Stappia
           aggregata IAM 12614]
 gi|118435527|gb|EAV42173.1| Endonuclease/exonuclease/phosphatase family protein [Stappia
           aggregata IAM 12614]
          Length = 351

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 82/290 (28%), Gaps = 40/290 (13%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   A   + +++VS N+  L   + V                L+ + +    D+V  QE
Sbjct: 95  LGPAAPGDRPLKVVSINLEHLFLGDKV----------------LQAFLEKEQPDVVVFQE 138

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LLG 132
           +     + +   +          +      R   +    A+  R        +     + 
Sbjct: 139 V--LWWLQERRWQRLGLPVGGAGKNGFPDYRKVGDLGGLAVYSRFPLSEEETRVISGDVP 196

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +  +    G+R  + L ++     + +L IH                +      +A  + 
Sbjct: 197 SGANVYYDGDRELLSLSLDTGAAPLHLLVIH-----PDSPRSEIRWENKRRYFDEADAVI 251

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           D +     +    +  GD+N             +          +P+      + + +  
Sbjct: 252 DTLK--AGNGSNILAIGDWNSSPWSARFQQTLERNGLKTAYPDGWPQTTRFFFDYSLHWI 309

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              P+D F + ++     +                     SDH P+ ++ 
Sbjct: 310 LGAPVDQFAVSRDIQIVNVSLGPDI--------------GSDHLPLIVEI 345


>gi|24649585|ref|NP_732967.1| twin, isoform B [Drosophila melanogaster]
 gi|23172143|gb|AAF56256.2| twin, isoform B [Drosophila melanogaster]
 gi|25009859|gb|AAN71099.1| AT23187p [Drosophila melanogaster]
 gi|220951022|gb|ACL88054.1| twin-PB [synthetic construct]
 gi|220957942|gb|ACL91514.1| twin-PB [synthetic construct]
          Length = 545

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 94/343 (27%), Gaps = 63/343 (18%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           +    ++  ADI+ LQE+ +     
Sbjct: 185 FTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYH 244

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131
              P+     +       + +K  S  +       AI  R     ++++S          
Sbjct: 245 FFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMA 304

Query: 132 ---GAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              G+ +  +R   +      A+  + E   + +  +    +      +  +     C +
Sbjct: 305 NAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDV 364

Query: 184 LSQQAQWLKDWITQKKESLVP--------------FVIAGDFNRKINYLGN--------- 220
              Q   L + +    +                   ++ GDFN   +             
Sbjct: 365 KLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVS 424

Query: 221 ----------NDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMD 263
                          + +  ND+       K +           N     K  IDY    
Sbjct: 425 MDHLDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYT 484

Query: 264 QNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +        L   S   +  N+          SDH P+ ++ +
Sbjct: 485 KTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELE 527


>gi|24649579|ref|NP_732964.1| twin, isoform C [Drosophila melanogaster]
 gi|23172140|gb|AAN13986.1| twin, isoform C [Drosophila melanogaster]
 gi|33589482|gb|AAQ22508.1| LD39302p [Drosophila melanogaster]
 gi|220950318|gb|ACL87702.1| twin-PA [synthetic construct]
          Length = 567

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 94/343 (27%), Gaps = 63/343 (18%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           +    ++  ADI+ LQE+ +     
Sbjct: 207 FTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYH 266

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131
              P+     +       + +K  S  +       AI  R     ++++S          
Sbjct: 267 FFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMA 326

Query: 132 ---GAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              G+ +  +R   +      A+  + E   + +  +    +      +  +     C +
Sbjct: 327 NAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDV 386

Query: 184 LSQQAQWLKDWITQKKESLVP--------------FVIAGDFNRKINYLGN--------- 220
              Q   L + +    +                   ++ GDFN   +             
Sbjct: 387 KLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVS 446

Query: 221 ----------NDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMD 263
                          + +  ND+       K +           N     K  IDY    
Sbjct: 447 MDHLDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYT 506

Query: 264 QNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +        L   S   +  N+          SDH P+ ++ +
Sbjct: 507 KTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELE 549


>gi|319790081|ref|YP_004151714.1| exodeoxyribonuclease III Xth [Thermovibrio ammonificans HB-1]
 gi|317114583|gb|ADU97073.1| exodeoxyribonuclease III Xth [Thermovibrio ammonificans HB-1]
          Length = 259

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 81/301 (26%), Gaps = 69/301 (22%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
            LV+WN+N                   +  + +  + +    D + LQE        ++F
Sbjct: 3   SLVTWNVN----------------SVRARLSYISYWLERERWDFLALQE---TKVPDELF 43

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P+  +           +         +  +A+  K   +        G  D         
Sbjct: 44  PEGVFKEL-------GYGVVYHGQKAYNGVALCFKGEPLRVLKGWPDGEDDEKR------ 90

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               L+ +  +   ++++++             S   +        LK ++ +      P
Sbjct: 91  ----LITVWLEPFPIVNVYVPRGG------EKGSERHAFKLYFLTKLKLFLQESFSPDEP 140

Query: 205 FVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNANK 249
             + GDFN   + L   D                 ++ +        F +          
Sbjct: 141 LAVVGDFNVARSELDVYDPAVWRGRPGFMEDERQAFEELLSFGLFDLFRELHPDEPGYTW 200

Query: 250 N--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                        + IDY ++ +   K   +         E   K  G   SDH P+   
Sbjct: 201 WDIETGGFARNRGLRIDYILVTEPLLKRAQECRV----LREARRKLGGLLPSDHAPLVAA 256

Query: 302 Y 302
           +
Sbjct: 257 F 257


>gi|218264592|ref|ZP_03478387.1| hypothetical protein PRABACTJOHN_04093 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221900|gb|EEC94550.1| hypothetical protein PRABACTJOHN_04093 [Parabacteroides johnsonii
           DSM 18315]
          Length = 373

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 85/305 (27%), Gaps = 64/305 (20%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                ++++++N+     +       N           + +Y  N  ADIV LQE     
Sbjct: 102 PKENVLKVLTYNVMGFGYKGHTEDSPNP----------IIRYIANSGADIVCLQEYAVGT 151

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +   +  +                   S       IAV  K      +      + +  S
Sbjct: 152 SKNFLTNQKIANALKMYRYRSIIPIGTSGTLKFN-IAVFSKYPISKSRKIKYESSFNGSS 210

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-------------------- 178
                      + INGKK+ +++ HL+SF       + YS                    
Sbjct: 211 IHE--------LNINGKKLTLINNHLESFKLTMEDRSHYSAFIKNLNSETLDGLRSSIEQ 262

Query: 179 ---PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
              P+  + ++QA+ + + I +        ++ GDFN       +               
Sbjct: 263 KLGPAFQIRARQARAVAEEIKKI--DTDYILVCGDFNDTPISYAHRTI------QGPLKD 314

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +                   ID  +   N     I  +  ++ Y            SDH
Sbjct: 315 AYAASGRGVGVTYNENFFWFRIDNILHSANMKP--INCTIDKVRY------------SDH 360

Query: 296 CPISI 300
            P+  
Sbjct: 361 YPMWC 365


>gi|255263312|ref|ZP_05342654.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62]
 gi|255105647|gb|EET48321.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62]
          Length = 262

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 70/308 (22%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
              L +WNIN++  +EG+                +    +    D++ LQE  S      
Sbjct: 2   PFTLATWNINSVRLREGI----------------VCDLLEQEAPDVLCLQECKSPVEKIP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F    +                     +  +A+  K       S    G   +    
Sbjct: 46  TERFAALGYSHI-----------VARGQKGYNGVAILSKLPLEDMGSEDFAGLGHARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V   +        V+  H                    L   A   +D+   +  
Sbjct: 93  -----VAAKLPNG----VVIHNHYVPAGGDVPDREVNEKFGQKLDYLADMERDF---RAA 140

Query: 201 SLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRC 245
                ++ GD N         D               + +  +      +   +      
Sbjct: 141 PPKRAILVGDLNIAPREDDVWDHKKLLKIISHTPVEVEAFNAVMAAGDWVDVTRADIPEG 200

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +            I Y         ++ SDH
Sbjct: 201 LLYSWWSYRAKDWDAADKGRRLDHVWATSDIAAS--ASGSRVIRYV-----RGWEKPSDH 253

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 254 APVFATFD 261


>gi|19112314|ref|NP_595522.1| AP-endonuclease Apn2 [Schizosaccharomyces pombe 972h-]
 gi|48427993|sp|P87175|APN2_SCHPO RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName:
           Full=AP endonuclease 2; AltName:
           Full=Apurinic-apyrimidinic endonuclease 2
 gi|2117306|emb|CAB09119.1| AP-endonuclease Apn2 [Schizosaccharomyces pombe]
 gi|40287246|gb|AAR83752.1| AP-endonuclease-like protein [Schizosaccharomyces pombe]
          Length = 523

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/321 (11%), Positives = 82/321 (25%), Gaps = 61/321 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---V 80
           +R++SWN+N +        W                  + L AD++ +QE+         
Sbjct: 1   MRILSWNVNGIQNPFNYFPWNKKNSYKE--------IFQELQADVICVQELKMQKDSFPQ 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK------NVRVLQQSYPLLGAK 134
                +     F   +    +S          AI V+ +           Q+       +
Sbjct: 53  QYAVVEGFDSYFTFPKIRKGYSGVGFYVKKDVAIPVKAEEGITGILPVRGQKYSYSEAPE 112

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--NTYSPSCSLLSQQAQWLK 192
                   +            +   + +  + F  +      N+            + L+
Sbjct: 113 HEKIGFFPKDIDRKTANWIDSEGRCILLDFQMFILIGVYCPVNSGENRLEYRRAFYKALR 172

Query: 193 DWITQKKESLVP-FVIAGDFN---RKINYLGNNDDFWKTI-------------------- 228
           + I +  +      ++ GD N     I+     D   +++                    
Sbjct: 173 ERIERLIKEGNRKIILVGDVNILCNPIDTADQKDIIRESLIPSIMESRQWIRDLLLPSRL 232

Query: 229 ---DPNDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                   +    ++    C   +           IDY +   +   ++        +  
Sbjct: 233 GLLLDIGRIQHPTRKGMFTCWNTRLNTRPTNYGTRIDYTLATPDLLPWVQDADIMAEV-- 290

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                      SDHCP+ +D 
Sbjct: 291 ---------MGSDHCPVYLDL 302


>gi|149193831|ref|ZP_01870929.1| exodeoxyribonuclease III (xthA) [Caminibacter mediatlanticus TB-2]
 gi|149135784|gb|EDM24262.1| exodeoxyribonuclease III (xthA) [Caminibacter mediatlanticus TB-2]
          Length = 252

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                   S   +++   K+ + D++ +QE+   N    +
Sbjct: 1   MKICTFNVN----------------SIRSRLEIIQNLVKDYNIDVLCMQEIKVENEKFPI 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +  CI +                    +A   K                       R
Sbjct: 45  IDGDFECIIH-------------GQKRLHGVATCSKYPIE------GYQKGFDGELNEPR 85

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L+       I +++I+           ++Y             L +W+ +   +  
Sbjct: 86  FIYTLI-----NVIHIINIYAPLG-------DSYGDRFEYKMYFYDKLFEWLKRFDLNKD 133

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN                    L               +    +E        
Sbjct: 134 KVLICGDFNISHTSLDVWDEEIWEGEVTHLPEERAILSKFLDIGFIDII-REVYKDEKVF 192

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           +DY ++ +  +    +             + R    SDH PI 
Sbjct: 193 TFYDYRGAAVYKNEGLRLDYILVSKPLFSKFKKVDIL-----TSIRRKRKPTPSDHVPII 247

Query: 300 IDYD 303
            ++D
Sbjct: 248 AEFD 251


>gi|78067925|ref|YP_370694.1| exodeoxyribonuclease III xth [Burkholderia sp. 383]
 gi|77968670|gb|ABB10050.1| Exodeoxyribonuclease III xth [Burkholderia sp. 383]
          Length = 257

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 85/307 (27%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +               ++    +AD V +QE  + + +  A
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIKVSADDLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    + +  ++       +S     +       +              +G   S   A 
Sbjct: 47  EFVEPHGFKSYFHHAEKKGYSGAGVYSRREPDDVI--------------IGFGSSEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ V+ +++ S    +  +                L        + 
Sbjct: 93  GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAAL--------KK 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N     +   +                +   +  +   +   +  D R  
Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEEREWLTKLFDDVGYVDVFRTLDPRAE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             +  + SDH P
Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSTSI-----------FKDIKFSDHAP 248

Query: 298 ISIDYDF 304
           ++IDYD+
Sbjct: 249 LTIDYDY 255


>gi|328958150|ref|YP_004375536.1| apurinic/apyrimidinic endonuclease [Carnobacterium sp. 17-4]
 gi|328674474|gb|AEB30520.1| apurinic/apyrimidinic endonuclease [Carnobacterium sp. 17-4]
          Length = 253

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 74/303 (24%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                        +  + LDAD   LQE        ++
Sbjct: 1   MKFISWNVNGLRAIVKKGF---------------VEIFEELDADFFCLQETKLQEGQIEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +             +    ++  A+  K+  +           D   R    
Sbjct: 46  DFPGYYDYW-----------NYAEKKGYSGTAIFTKHKPLDVSYGIGKPEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ ++    +V+  +  +        +             + L        +S  
Sbjct: 91  -----VITLSYPNYYVVTCYTPNSKSELKRLDYRMQWEDDFQLYLKKL--------DSEK 137

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N                   +       +  +     +  F         A 
Sbjct: 138 PVILCGDLNVAHENIDLKNWKTNQLSAGFSKEERMKFSALLDAGFIDTFRYFYPDLEGAY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +       L +    +               SDHCP+ 
Sbjct: 198 TWWNYRFNARKTNAGWRIDYFCVSTRLQDHLQEARILD-----------DIVGSDHCPVE 246

Query: 300 IDY 302
           +  
Sbjct: 247 LIL 249


>gi|84385657|ref|ZP_00988688.1| putative phospholipase C precursor [Vibrio splendidus 12B01]
 gi|84379637|gb|EAP96489.1| putative phospholipase C precursor [Vibrio splendidus 12B01]
          Length = 451

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 82/293 (27%), Gaps = 34/293 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N+  L         + SV   T               D++ LQE  S +  
Sbjct: 179 PNTLNVGSYNLWMLPGVSSNITSRASVLDHTL-----------SGYDVLTLQEAFSSD-- 225

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++        +     ++        +        R   +      +      D ++  
Sbjct: 226 REILFNALAEEYAFRTEVVGGGTSAMYDGGVVTF-SRHPIIETDSIVFEHCSGTDCYADK 284

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW-ITQKK 199
                V   V+ +G+   + + HL SF            +  L   Q   ++ + +T+  
Sbjct: 285 ---GVVYTKVDKDGEIYHIFNTHLASFNTP--------AAKRLRRLQLGLMRTFMLTKDI 333

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFW--------KTIDPNDSLIRFPKEKDSRCNANKNL 251
            S    + AGDFN   N                        +    P             
Sbjct: 334 PSNEAVIYAGDFNIDKNSDFVEYLLMLATLDVDPPEFRGYTNATFDPTINPYAAYNYSGG 393

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +   +DY  + +   +     +  ++             LSDH  I+ +++F
Sbjct: 394 ADVEYLDYVFVSRMHKRATSNTNAVKLHQRLSSDTWGSWHLSDHFAINGNFEF 446


>gi|71661273|ref|XP_817660.1| MP99 [Trypanosoma cruzi strain CL Brener]
 gi|70882865|gb|EAN95809.1| MP99, putative [Trypanosoma cruzi]
          Length = 913

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 95/314 (30%), Gaps = 41/314 (13%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLW---KNSVKRTTSDYTLLRQYAKNLDADIV 69
           ++P        +R+V+WN+   +   G             T + Y  L +  + LDAD++
Sbjct: 614 VLPTPTEELSTLRVVTWNVQ-FNRHSGERTPLGRDGIDWCTPTRYIALAKTMETLDADVI 672

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            +QE+              WC +   ++ +      S N+     A+R   V +L + + 
Sbjct: 673 SMQEVE-----------PAWCKYLCEQQWVRERYALSCNEDSH--AIRPWGVMLLVKRHL 719

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            +      + A       +   +    I V      +   L  L      + S  + Q +
Sbjct: 720 RVEGMHHANVAAFAGHTSV---MPEVTITVSKNVPVTIGSLHLLAPYNKNNVSNRTTQLE 776

Query: 190 WLKDWITQKKESLVP---FVIAGDFNRKINYLGN------NDDFWKTIDPNDSL---IRF 237
            L   +  +  +       ++ GDFN   N            D W  ++P ++       
Sbjct: 777 NLTKRMRARPSAGGVPTGAIVMGDFNDYANNYFTFPPELGFKDAWSLLNPENNKNEGYTI 836

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE---------DDIKSR 288
             +++               D  +      + +  E                  D     
Sbjct: 837 DGDRNPYAGQIIEREFFGRADRVLFASRHLQPIHAELVGTTSVRALGITKQVNCDKAVPE 896

Query: 289 GKRLSDHCPISIDY 302
               SDH  + +++
Sbjct: 897 YLYPSDHFGLLVEF 910


>gi|156386353|ref|XP_001633877.1| predicted protein [Nematostella vectensis]
 gi|156220953|gb|EDO41814.1| predicted protein [Nematostella vectensis]
          Length = 315

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 95/287 (33%), Gaps = 38/287 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ V++N+         +   +        +  L    +    D+V +QE+        
Sbjct: 57  TIKFVTYNMWC-------NYLVSCKPNYRERFEGLAAGVQEF--DVVMVQEVFILQVGPV 107

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            F      +  + ER   H +    +           IA+  K      +S     A  +
Sbjct: 108 EFTGCASAMVEAMERHGFHYRTSFTDTIPHIFGQSNGIAIFSKIPFHYTKSVVFKDAAFA 167

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R  N+  V   ++I+GK+++V + H              +    + + Q + L+  + 
Sbjct: 168 -ERVNNKGFVFAEMKISGKQVFVFNTHT------------DAHKEEIRAAQMEQLRKTV- 213

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                   F++ GDFN   NY   + +  + ++ N+ + +           N    N   
Sbjct: 214 LNLPKSAYFIVGGDFNINPNYPPLDGNEKEYLNLNEKMKKMRLVPVFTER-NATHLNGGS 272

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            DY  +DQ            +     + +      +SDH  + I+ +
Sbjct: 273 YDYVFIDQKFKV--------QDHKVINLLTKNHGMVSDHYGLYIEIE 311


>gi|148675569|gb|EDL07516.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_d [Mus musculus]
          Length = 530

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/338 (14%), Positives = 79/338 (23%), Gaps = 79/338 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 9   LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 64

Query: 81  --------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129
                      F  +     YS     +        D  T +A           L     
Sbjct: 65  PLAIVEGYNSYFSFSRSRSGYSECSCPSPGVATFCKDSATPVAAEEGLSGVFATLNGDIG 124

Query: 130 LLGAKDSFSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTY 177
             G  D F++   R                 +E   K + +++++               
Sbjct: 125 CYGNMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFK 184

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDD 223
                LL  +A+ L         +    +I GD N                         
Sbjct: 185 MRFYRLLQMRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKW 237

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQN 265
               +                     +                        +DY + D+ 
Sbjct: 238 MDGLLSNPGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRA 297

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       I   +          SDHCP+    +
Sbjct: 298 L----------VIDTFQASFLLPEVMGSDHCPVGAVLN 325


>gi|125718506|ref|YP_001035639.1| exodeoxyribonuclease [Streptococcus sanguinis SK36]
 gi|125498423|gb|ABN45089.1| Exodeoxyribonuclease, putative [Streptococcus sanguinis SK36]
          Length = 322

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  +ADI+ +QE          
Sbjct: 48  MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSATGPTK 101

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  +    G  
Sbjct: 102 KHLEILTNLFPEYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGR- 160

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E +G   +V  ++  +        +      +  ++    L        +   
Sbjct: 161 ---IITLEFDG--FFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATL--------DEQK 207

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 208 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQY 267

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 268 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 316

Query: 299 SIDYD 303
            ++ +
Sbjct: 317 VMEIE 321


>gi|26354044|dbj|BAC40652.1| unnamed protein product [Mus musculus]
 gi|123223480|emb|CAM21422.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 523

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/338 (14%), Positives = 79/338 (23%), Gaps = 79/338 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 2   LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57

Query: 81  --------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129
                      F  +     YS     +        D  T +A           L     
Sbjct: 58  PLAIVEGYNSYFSFSRSRSGYSECSCPSPGVATFCKDSATPVAAEEGLSGVFATLNGDIG 117

Query: 130 LLGAKDSFSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTY 177
             G  D F++   R                 +E   K + +++++               
Sbjct: 118 CYGNMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFK 177

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDD 223
                LL  +A+ L         +    +I GD N                         
Sbjct: 178 MRFYRLLQMRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKW 230

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQN 265
               +                     +                        +DY + D+ 
Sbjct: 231 MDGLLSNPGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRA 290

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       I   +          SDHCP+    +
Sbjct: 291 L----------VIDTFQASFLLPEVMGSDHCPVGAVLN 318


>gi|311347452|gb|ADP90671.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
          Length = 518

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 77/331 (23%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         +            + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +      A  V                    G  D 
Sbjct: 59  PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184
           F++   R                  E   K + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSN 231

Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                               ++L     +DY + D+        
Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTL------ 285

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +          SDHCP+     
Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312


>gi|304310166|ref|YP_003809764.1| Exodeoxyribonuclease III [gamma proteobacterium HdN1]
 gi|301795899|emb|CBL44100.1| Exodeoxyribonuclease III [gamma proteobacterium HdN1]
          Length = 277

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/269 (11%), Positives = 74/269 (27%), Gaps = 59/269 (21%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           ++ +    D+V +QE             +   +F +     +    D+    ++ +AV  
Sbjct: 40  EWIQKRQPDVVCIQETK--------AQLHQLDVFITDIPGYHSYFFDAQKKGYSGVAVYC 91

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K               D   R          ++++   + V  ++L S    D  +    
Sbjct: 92  KREPDRVVRGLGFPIADDEGRY---------LQVDFGDLSVASLYLPSGSASDEAQEKKY 142

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------- 223
                     +         +E    +++ GD+N     +   +                
Sbjct: 143 RFLDTFLPMMKA-------WREDGRRYILCGDWNIAHKNIDIKNWRSNQKNSGFLPEERA 195

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQES 274
           +   +      +   +  +S  +      N+           IDY ++       +    
Sbjct: 196 WLDRVFDEQGWVDAFRAVNSEADQYTWWSNRGQAWAKNVGWRIDYQIVSPELRDTISSTE 255

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        + +R SDH P+ + YD
Sbjct: 256 I-----------YKDERFSDHAPLLMSYD 273


>gi|312194345|ref|YP_004014406.1| endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
 gi|311225681|gb|ADP78536.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
          Length = 1037

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/362 (12%), Positives = 87/362 (24%), Gaps = 90/362 (24%)

Query: 25  RLVSWNINTLSEQEGV---------------------------SLWKNSVKRTTSD---- 53
           RL ++N+       G                                +   R  ++    
Sbjct: 582 RLATFNVENYFSMTGEQYVSMGLGTCTYYTDRQGNRIGVNTCTGTDGSPGPRGAANDASF 641

Query: 54  ---YTLLRQYAKNLDADIVFLQEMGSYN---------------AVAKVFPKNTWCIFYST 95
               + +      L A IV L+E+ + +               A+      N W    S 
Sbjct: 642 ARQQSKIVTGINRLGASIVSLEEVENSSKFGEPRDTTLAGLVGALNAAAGSNVWEFVPSP 701

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-DSFSRAGNRRAVELLVEING 154
                      +  I TA   +   V ++  +  L G   D    +  R  +    +  G
Sbjct: 702 PDDQLPPLAQQDV-IRTAFIYKPAAVSLVGAAKVLTGDSADGQPFSIAREPLAQGFKKAG 760

Query: 155 KK----IWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQAQWLKDWITQK 198
                   V+  HLKS                 S         +    Q   L  + TQ 
Sbjct: 761 ATDKDAFLVVANHLKSKGADATGLYPGDAEDTSSPAVDQGAFNATRVHQVTDLSAFATQT 820

Query: 199 KES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                     + GDFN           +        S +   ++             +  
Sbjct: 821 AAGLGTNRIFLLGDFNAYTGEDPMQVLYGAGYVDLGSTLDPAEQT------YSYNSLEGS 874

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---------------LSDHCPISID 301
           +D+ + +  A   +      +I   E    +  +                 SDH P+ + 
Sbjct: 875 LDHVLANPAALSMVTGADVWQINAQEAVAFAYSRYNYNATQLFNGTDPFAASDHDPVVVG 934

Query: 302 YD 303
             
Sbjct: 935 LT 936


>gi|237720311|ref|ZP_04550792.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_2_4]
 gi|229450062|gb|EEO55853.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_2_4]
          Length = 353

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 91/343 (26%), Gaps = 59/343 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++ L    +    +  Q+       +  +N+  L +        +           
Sbjct: 13  MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 72

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           +  +  +    + +    L  D       I+ + E+ +Y  +  +  +            
Sbjct: 73  NTMKYKAKLKNMSEILSLLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYR 129

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H + +    +  A     K   +      +     + +    R  +     I  +K+ 
Sbjct: 130 YVHYEGEDQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIADEKMH 188

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  H  S           SP+     +Q + +KD +  +++S    VI GD N      
Sbjct: 189 FIVNHWPSR-------AAASPARERAGEQVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 240

Query: 219 GNNDDFWKTID-----PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271
                           P D    +                    D  V   N        
Sbjct: 241 SMAVALGAKRKPVDAGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 300

Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297
            + +   +++ D +  +  +                  SDH P
Sbjct: 301 LKFYKHEIFSRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 343


>gi|254409485|ref|ZP_05023266.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196183482|gb|EDX78465.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 287

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 85/284 (29%), Gaps = 48/284 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ LV++NI                      +  + +  ++ DAD + LQE+   +    
Sbjct: 39  ELTLVTYNIWFSDYH------------RQQRHEAILKLIQDCDADAIALQEVTPTSLKLI 86

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +        +YS++                 + +  K          L+          +
Sbjct: 87  LEQDWVRKNYYSSDTTGVTVNP-------YGVLLLSKLPIDRLFFCDLIS-------QMS 132

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R+ +   +++NG+   +  +HL+S               S+ + Q   +   +       
Sbjct: 133 RKFLCAELQLNGQNFNIATVHLES----------KKKFASIRTIQLADIFPLLE----HA 178

Query: 203 VPFVIAGDFN-------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
              V+ GDFN          N      D W  +  ++       + +      K    K+
Sbjct: 179 DHAVLMGDFNFCSSWKSENRNLDPRYQDMWAVLRGDEPGYTEDTDINLMRLQQKQKHKKV 238

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             D  ++   +  +   ES   +        S     SDH  + 
Sbjct: 239 RFDRILLRSASQSW-QPESIERLGLKPISRNSPNVFPSDHFGLV 281


>gi|5410346|gb|AAD43041.1|AF119046_1 APE2 protein [Homo sapiens]
          Length = 518

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 77/331 (23%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         +            + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +      A  V                    G  D 
Sbjct: 59  PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184
           F++   R                  E   K + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSN 231

Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                               ++L     +DY + D+        
Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTL------ 285

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +          SDHCP+     
Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312


>gi|18375507|ref|NP_055296.2| DNA-(apurinic or apyrimidinic site) lyase 2 [Homo sapiens]
 gi|73921676|sp|Q9UBZ4|APEX2_HUMAN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName:
           Full=AP endonuclease XTH2; AltName: Full=APEX nuclease
           2; AltName: Full=APEX nuclease-like 2; AltName:
           Full=Apurinic-apyrimidinic endonuclease 2; Short=AP
           endonuclease 2
 gi|4996359|dbj|BAA78422.1| APEX nuclease-like 2 protein [Homo sapiens]
 gi|5102658|emb|CAB45242.1| AP endonuclease XTH2, putative [Homo sapiens]
 gi|10336529|dbj|BAB13764.1| apurinic/apyrimidinic endonuclease 2 [Homo sapiens]
 gi|12804203|gb|AAH02959.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens]
 gi|57471611|emb|CAI43126.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens]
 gi|57864642|gb|AAW56941.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens]
 gi|119613615|gb|EAW93209.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2, isoform CRA_b
           [Homo sapiens]
 gi|123993987|gb|ABM84595.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic
           construct]
 gi|123997761|gb|ABM86482.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic
           construct]
 gi|208965822|dbj|BAG72925.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic
           construct]
 gi|311347418|gb|ADP90654.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347420|gb|ADP90655.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347422|gb|ADP90656.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347424|gb|ADP90657.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347426|gb|ADP90658.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347428|gb|ADP90659.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347430|gb|ADP90660.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347432|gb|ADP90661.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347434|gb|ADP90662.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347436|gb|ADP90663.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347438|gb|ADP90664.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347440|gb|ADP90665.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347442|gb|ADP90666.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347444|gb|ADP90667.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347446|gb|ADP90668.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347448|gb|ADP90669.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347450|gb|ADP90670.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347454|gb|ADP90672.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347456|gb|ADP90673.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347458|gb|ADP90674.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347460|gb|ADP90675.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347462|gb|ADP90676.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347464|gb|ADP90677.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347466|gb|ADP90678.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347468|gb|ADP90679.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347470|gb|ADP90680.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347472|gb|ADP90681.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347474|gb|ADP90682.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347476|gb|ADP90683.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347478|gb|ADP90684.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347480|gb|ADP90685.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347482|gb|ADP90686.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347484|gb|ADP90687.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347488|gb|ADP90689.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347490|gb|ADP90690.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347492|gb|ADP90691.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347494|gb|ADP90692.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347496|gb|ADP90693.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
          Length = 518

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 77/331 (23%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         +            + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +      A  V                    G  D 
Sbjct: 59  PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184
           F++   R                  E   K + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSN 231

Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                               ++L     +DY + D+        
Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTL------ 285

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +          SDHCP+     
Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312


>gi|83950914|ref|ZP_00959647.1| exodeoxyribonuclease III, putative [Roseovarius nubinhibens ISM]
 gi|83838813|gb|EAP78109.1| exodeoxyribonuclease III, putative [Roseovarius nubinhibens ISM]
          Length = 262

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/308 (9%), Positives = 66/308 (21%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
              L +WNIN                       ++ +       D++ LQE  S      
Sbjct: 2   SFSLATWNIN----------------SVRLREPIVCKLLAEEGPDVLCLQECKSPVEKIP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              F +  +                     +  +A+  K                +    
Sbjct: 46  TAAFQELGYHHMI-----------ARGQKGYNGVAILSKLPIEDVGDRDFAALGHARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V   +E     + + + ++ +    D  +   +            ++DW   ++ 
Sbjct: 93  -----VAGRLENG---VTIHNFYVPAG--GDVPDRAVNEKFGQKLDYLTEMRDWFHAERP 142

Query: 201 SLVPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRC 245
                ++ GD N          +    K +                       +      
Sbjct: 143 EKS--ILVGDLNIAPREDDVWNHKQLLKVVSHTPVEVEHFNEVMDAGQWSDVTRADIPEG 200

Query: 246 NANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+     +                        ++ SDH
Sbjct: 201 LLYSWWSYRARDWDVADKGRRLDHVWATPDIRNAAHSS-------RVLRDARGWEKPSDH 253

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 254 APVFAHFD 261


>gi|82753368|ref|XP_727650.1| sphingomyelin/lysocholinephospholipid-phospholipase C [Plasmodium
           yoelii yoelii str. 17XNL]
 gi|23483595|gb|EAA19215.1| sphingomyelin/lysocholinephospholipid-phospholipase C-related
           [Plasmodium yoelii yoelii]
          Length = 504

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 65/233 (27%), Gaps = 40/233 (17%)

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                  + ++  I V  K+    + +      K     +  + A+ L   +    I ++
Sbjct: 269 SGGPKFRHFLNGGIIVLSKHKISQKHALIFENCKFPEMFSA-KGAIYLKFNVKNNVIHLV 327

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-----TQKKESLVPFVIAGDFNRKI 215
             HL +                   +Q + L  W+     ++  ++  P    GDFN + 
Sbjct: 328 ATHLHAG--------NTKSDEKCRRKQIEELTKWVYNGVPSKFIKNSEPLFFVGDFNIRY 379

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI------------DYFVMD 263
             + + + F +                     +        I            DY ++ 
Sbjct: 380 --IKDENFFKEITSSKYLNCTVTNNTLETTYDSSINDYCRYIEDDFEHKYVDTLDYILVS 437

Query: 264 QNAYKF-LIQESFSEILYN-----------EDDIKSRGKRLSDHCPISIDYDF 304
           +N+    ++ ++  +  Y                       SDH PI   + F
Sbjct: 438 KNSNIKTIVPQTAVQHGYKPISIFKTILCCIPYQSINIHHASDHFPIYATFKF 490



 Score = 39.5 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 28/84 (33%), Gaps = 2/84 (2%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               Q   ++S+N+  +       +     ++T   Y  + +     + DI+ L E+ + 
Sbjct: 5   TPPDQHFTIMSYNVQMIPVPISTKINIGYRQKTLEKY--ICELDNIYNTDILVLNEVFTK 62

Query: 78  NAVAKVFPKNTWCIFYSTERLINH 101
            A   +        F     ++  
Sbjct: 63  QAYNMLTTGEIKKRFPYHTNILGE 86


>gi|224023659|ref|ZP_03642025.1| hypothetical protein BACCOPRO_00371 [Bacteroides coprophilus DSM
           18228]
 gi|224016881|gb|EEF74893.1| hypothetical protein BACCOPRO_00371 [Bacteroides coprophilus DSM
           18228]
          Length = 637

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 82/286 (28%), Gaps = 57/286 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
            V   ++++S+NI      +G            +DY  + +  +   AD+V LQE+ S  
Sbjct: 34  PVENDLKIISYNIRHGEGLDG-----------KTDYVRIARMFREQQADVVALQEVDSVT 82

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             +         +          +K  S +     + +  +   +  +   L G      
Sbjct: 83  GRSHKKDVLR-EVANEALMYPVFAKAISFDGGSYGVGLLAREHPLSVERIALPG------ 135

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R   R  +    +      ++   HL                      Q   L       
Sbjct: 136 REEARVLLLAEFD----DYYIGCTHLSLTPED----------------QLASLDVIRKIA 175

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                PF++AGD+N                   +    F    + +       + +  ID
Sbjct: 176 SRLNKPFLLAGDWNALPESQTI----------QEIRKDFTLLNNLKQATYPANKPEDVID 225

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Y  + +   K ++Q+  + +              SDH P+     F
Sbjct: 226 YIAVWKATGKSVVQKGGTVLPDTVS---------SDHRPVMAKVRF 262


>gi|322373807|ref|ZP_08048342.1| RgfB protein [Streptococcus sp. C150]
 gi|321277179|gb|EFX54249.1| RgfB protein [Streptococcus sp. C150]
          Length = 270

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 77/284 (27%), Gaps = 54/284 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +     +  L++       D++  QE+      + V     +    S             
Sbjct: 14  EDAEGKFQTLKKQILKAQYDLICFQEVNQEIETSVVATDAYYHALPSATPIHQDHFVRLL 73

Query: 96  ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 + ++  +AV  +      +   L+   D  +    RR 
Sbjct: 74  VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASE--ILVSDVDDPTDYHTRRV 131

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                 ++G+++ V  +HL  +      E                      + K    P 
Sbjct: 132 AVAETTVDGREVAVASVHLSWWDKGFQEEWARIE----------------ERFKAIGKPL 175

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260
           ++AGDFN      G        +   DS     +   S       +  K     + IDY 
Sbjct: 176 ILAGDFNNPAGQEGYQAILASPLHLQDSFEVAKETTGSYTVGPGIDGWKGNEEPLRIDYV 235

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              Q+         ++    +     +    +SDH  +  + +F
Sbjct: 236 FASQD---------WTVNRLSVIFDGNNQPLVSDHYGLEAELEF 270


>gi|330924640|ref|XP_003300719.1| hypothetical protein PTT_12052 [Pyrenophora teres f. teres 0-1]
 gi|311325004|gb|EFQ91187.1| hypothetical protein PTT_12052 [Pyrenophora teres f. teres 0-1]
          Length = 617

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/338 (11%), Positives = 85/338 (25%), Gaps = 66/338 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            ++   +     ++N+  L+                S    + +Y ++   D++F+QE+ 
Sbjct: 293 VSSGGCEGFTFGAYNVENLAPNSSHHG---------SLARHVVEYMRS--PDVIFVQEVQ 341

Query: 76  SYNAVA-----------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
             N                              F       +        +I  A     
Sbjct: 342 DDNGPTNNGVVSANLTLTTLTAAITLAGGPNYTFTDIVPTDSQDGGQPGGNIRVAYLYNP 401

Query: 119 KNVRVLQ------------------QSYPLLGAKDSFSRAGNRRAVELLVEINGKK---- 156
            +VR+                    +  P      + +   +R+ +    E+  K     
Sbjct: 402 NHVRLYNPNPGGALDANEVLAGPSLKYNPGRIEPANAAWTSSRKPLVAQWEVIRKASAQK 461

Query: 157 -----IWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESL--VPF 205
                 + +++H  S     SL     P          +Q++    +I            
Sbjct: 462 NKPDVFFTVNVHFGSKGGSSSLHGDARPPVNGGVEDRLEQSRLTAKFIKDILSKDKSARI 521

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           + AGDFN         +  + TI     L                  N   +D+  +  +
Sbjct: 522 ITAGDFNEFAFVEPLEE--YTTISGLKDLDAVVGIDKVERYTYMFDMNTQQLDHMYVSPS 579

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K              +       ++SDH P     +
Sbjct: 580 LAKKSKAAYEHIH---VNTWPEFAAQVSDHDPSVAKLN 614


>gi|311109328|ref|YP_003982181.1| exodeoxyribonuclease III 2 [Achromobacter xylosoxidans A8]
 gi|310764017|gb|ADP19466.1| exodeoxyribonuclease III 2 [Achromobacter xylosoxidans A8]
          Length = 262

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 69/270 (25%), Gaps = 59/270 (21%)

Query: 60  YAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           + +   AD++ LQE  +   +    +     +   +       +S               
Sbjct: 23  WMEKHAADVLCLQEIKVSHEDLTDDLRHPPGYTGHFHHAVKKGYSGVGIY---------- 72

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                         G          R      +  + K + V+  +L S    D  +   
Sbjct: 73  ----LRDAAERVNTGLDCEEFDPEGRI-----IRADWKNLSVISAYLPSGSSGDERQQAK 123

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNND 222
                        L   + + K +   F+I GD+N                    L    
Sbjct: 124 YRFLDRFGPWIDAL---MHEHKTTGREFIICGDWNIAHKEIDLKNWKGNLKNSGFLPEER 180

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273
            +   +      +   +  D R +      N+           IDY +            
Sbjct: 181 AWLTDVFDKRGFVDVFRTIDDRPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARNV 240

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +             + +R SDH P++IDYD
Sbjct: 241 AI-----------YKDERFSDHAPLTIDYD 259


>gi|293602414|ref|ZP_06684860.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553]
 gi|292819176|gb|EFF78211.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553]
          Length = 292

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 70/270 (25%), Gaps = 59/270 (21%)

Query: 60  YAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           + +   ADI+ LQE+     +    +     +   +       +S               
Sbjct: 53  WMEKHAADILCLQEIKIADADLTEDLRHPPGYTGHFHHAVKKGYSGVGIY---------- 102

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                        +G          R      +  + K + V+  +L S    D  +   
Sbjct: 103 ----LRDAAERVNIGLGCEEFDPEGRI-----IRADWKNLSVISAYLPSGSSGDERQQAK 153

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNND 222
                        L   + + K +   FVI GD+N                    L    
Sbjct: 154 YRFLDRFGPWIDAL---MHEHKTTGREFVICGDWNIAHKEIDLKNWKGNMKNSGFLPEER 210

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273
            +   +      +   +  D R +      N+           IDY +            
Sbjct: 211 AWLTDVFDKRGFVDVFRTIDDRPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARNV 270

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +             + +R SDH P++IDYD
Sbjct: 271 AI-----------YKDERFSDHAPLTIDYD 289


>gi|150021512|ref|YP_001306866.1| endonuclease/exonuclease/phosphatase [Thermosipho melanesiensis
           BI429]
 gi|149794033|gb|ABR31481.1| Endonuclease/exonuclease/phosphatase [Thermosipho melanesiensis
           BI429]
          Length = 350

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
             + +  WNI               G +    S          + +  +   ADI   QE
Sbjct: 55  NTLTIFDWNIGYAGLGKDMDFFLDGGKNAIVPSKLVGEY-LNGILEVLREKRADIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + ++   +    +      +     +    +   +A   K    
Sbjct: 114 IDVKSWRTHYVNQLEFLKQIGDYDIAFAYNYKVLFVPVPYLNPMGKVEAGLATFSKYKID 173

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             + Y L G     ++     R  +   +  +N K++ +L+IH  ++             
Sbjct: 174 EAKRYSLPGEYSWPTKLFQLDRCLLLTRIRTLNNKELVLLNIHPSAYDKGGV-------- 225

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPN 231
             L  +Q +++      + E     VI GD+N +                      +   
Sbjct: 226 --LREKQLKFIMKLAKNEYEKGNYVVIGGDWNSEFYSEKLFGYTEEKPEAYIKLPELFKL 283

Query: 232 DSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
           +       +      +              ID F +  N     ++              
Sbjct: 284 NGWKWGISKNAPTNRSISAPYVKGETFVTVIDGFYVSPNIEILEVEN------------L 331

Query: 287 SRGKRLSDHCPISIDY 302
             G   SDH P+ +  
Sbjct: 332 DLGFEYSDHNPVVMKI 347


>gi|21654881|gb|AAK85705.1| CCR4 [Drosophila melanogaster]
          Length = 566

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 94/343 (27%), Gaps = 63/343 (18%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           +    ++  ADI+ LQE+ +     
Sbjct: 206 FTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYH 265

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131
              P+     +       + +K  S  +       AI  R     ++++S          
Sbjct: 266 FFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMA 325

Query: 132 ---GAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              G+ +  +R   +      A+  + E   + +  +    +      +  +     C +
Sbjct: 326 NAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDV 385

Query: 184 LSQQAQWLKDWITQKKESLVP--------------FVIAGDFNRKINYLGN--------- 220
              Q   L + +    +                   ++ GDFN   +             
Sbjct: 386 KLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVS 445

Query: 221 ----------NDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMD 263
                          + +  ND+       K +           N     K  IDY    
Sbjct: 446 MDHLDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYT 505

Query: 264 QNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +        L   S   +  N+          SDH P+ ++ +
Sbjct: 506 KTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELE 548


>gi|73921677|sp|Q68G58|APEX2_MOUSE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName:
           Full=APEX nuclease 2; AltName:
           Full=Apurinic-apyrimidinic endonuclease 2; Short=AP
           endonuclease 2
 gi|51259055|gb|AAH78633.1| Apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 516

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 78/331 (23%), Gaps = 72/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 2   LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57

Query: 82  --KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136
              +         +S  R           D  T +A           L       G  D 
Sbjct: 58  PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDE 117

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                 +E   K + +++++                    LL
Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 178 QMRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSN 230

Query: 231 NDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQ 272
                              +                        +DY + D+        
Sbjct: 231 PGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRAL------ 284

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +          SDHCP+    +
Sbjct: 285 ----VIDTFQASFLLPEVMGSDHCPVGAVLN 311


>gi|21541818|ref|NP_084219.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Mus musculus]
 gi|19912820|dbj|BAB88654.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
 gi|22830557|dbj|BAC11807.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
 gi|26341548|dbj|BAC34436.1| unnamed protein product [Mus musculus]
 gi|123223479|emb|CAM21421.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
 gi|148675566|gb|EDL07513.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_a [Mus musculus]
          Length = 516

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 78/331 (23%), Gaps = 72/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 2   LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57

Query: 82  --KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136
              +         +S  R           D  T +A           L       G  D 
Sbjct: 58  PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDE 117

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                 +E   K + +++++                    LL
Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 178 QMRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSN 230

Query: 231 NDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQ 272
                              +                        +DY + D+        
Sbjct: 231 PGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRAL------ 284

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +          SDHCP+    +
Sbjct: 285 ----VIDTFQASFLLPEVMGSDHCPVGAVLN 311


>gi|311900561|dbj|BAJ32969.1| hypothetical protein KSE_72140 [Kitasatospora setae KM-6054]
          Length = 296

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 81/323 (25%), Gaps = 73/323 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +RL ++N+              +         L+      LDAD++ LQE+         
Sbjct: 1   MRLATFNVLHGRPVRADGRPAAAGPEPFGPGPLIAAA-TALDADVLALQELDRRQDRTGH 59

Query: 79  -----AVAKVFPKNTWCIFYSTER-------------------LINHSKRDSNNDIHTAI 114
                AVA+      W    +                                      +
Sbjct: 60  TDQARAVAEATGATDWRYATALHARAAPGRRWEPDPAEPGLRLYGPPGTGHDGQSPSHGV 119

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDI 162
           A+  +   +   ++ L  +  +              R   R A+  ++         + +
Sbjct: 120 ALITRLPVLAWHAHRLPASPLAAPLPMPGRPGLTVVRDRPRAALAAVLRGRRGPFTAVVL 179

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLG 219
           HL  F   +               Q   ++ WI        P ++ GDFN   R      
Sbjct: 180 HLSLFPGSNVR-------------QLLAVRRWIADLP---RPHLLLGDFNLGGRLPATAL 223

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
              D                   +R       R ++ +D+ +            +   + 
Sbjct: 224 RAADLLTPAGAGTPGGPAGWHDLARARTFPAHRPRLQLDHILASG--LPRDHPHTAHYLR 281

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
                       LSDH P+ +D 
Sbjct: 282 LP----------LSDHRPLVVDL 294


>gi|295428588|ref|ZP_06821215.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|295127570|gb|EFG57209.1| sphingomyelin phosphodiesterase [Staphylococcus aureus subsp.
           aureus EMRSA16]
          Length = 231

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 65/216 (30%), Gaps = 18/216 (8%)

Query: 97  RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                    S       +A+  K     +  +        F    N+  V   +E NGK 
Sbjct: 19  WDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGC-GFDNDSNKGFVYTKIEKNGKN 77

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKI 215
           + V+  H +S    DS          + ++Q + + D++ +          I GD N   
Sbjct: 78  VHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVN- 132

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYK-- 268
                  D  K ++ ND L                  N        +DY   D++  +  
Sbjct: 133 KGTEEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPK 192

Query: 269 FLIQESFSEILYNEDDIKSRGKRL----SDHCPISI 300
            L+ E  +E     D        +    SDH PI  
Sbjct: 193 QLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKA 228


>gi|237712213|ref|ZP_04542694.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229453534|gb|EEO59255.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 353

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 91/309 (29%), Gaps = 74/309 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   +   ++++V++N+++   +                     +     + D++  QE 
Sbjct: 94  PTKYANENRLKIVTYNVHSFGNEITGFS-----------AKEFAEMMNKEETDVLCFQEY 142

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +   +NT+            +   S      + A+  +      Q+       
Sbjct: 143 RGNGDFTEQDLQNTYA----------KTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTN 192

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD----------------------S 172
           +         A+   +++ G  I ++++H+++  F                         
Sbjct: 193 N--------GAIWADLDVKGMTIRIINVHMQTTNFDRMRSKAAQARGAQDEEQERAIYLD 244

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
             + +  +    + QA+ +   I   +    P ++ GDFN         +     +    
Sbjct: 245 YSDNFRENTVRRAGQAEQISSLINATE---YPLIVCGDFNDPPG-TFTYETLKSGLKDG- 299

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                 +   +      +L   + IDY          L    +  I Y+          +
Sbjct: 300 -FQTAGEGYGATYRGVHHL---LRIDYLFHS----TLLEGIKYKVIPYD----------M 341

Query: 293 SDHCPISID 301
           SDH P+ ++
Sbjct: 342 SDHNPVYLE 350


>gi|225012745|ref|ZP_03703180.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium
           MS024-2A]
 gi|225003278|gb|EEG41253.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium
           MS024-2A]
          Length = 335

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 79/287 (27%), Gaps = 57/287 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S+N+ + +    +       +        +  +      DIV  QE     A    
Sbjct: 95  ISVMSYNVRSFNRFNWIDSKNIPAE--------IEGFINKEQPDIVCFQEYAQNEAPD-- 144

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F K  + IF          K    +       +  K   +  +S     +K+        
Sbjct: 145 FEKYPYKIF----------KPYVGSGQI-GSCIISKFPLLNSKSISFKESKN-------- 185

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSL--------ENTYSPSCSLLSQQAQWLKDWI 195
             +          + + ++H +S               +        +   Q Q +  + 
Sbjct: 186 GGMYTDFLWKKDTLRLYNVHFESLRIDSKDTLIAAEYSQKFRRKINEVFKIQNQQVAQFN 245

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
             K  +  P +I  D N         +     +          K +         L+  +
Sbjct: 246 DIKNLNEYPEIICTDLNNNAFSKSYLN-----LSRGRKDSFLEKGEGFGA-TYNFLKFPL 299

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+ +              + + Y    +      LSDH PISI +
Sbjct: 300 RIDFIMSSPK---------INILSYKTHKV-----NLSDHKPISIIF 332


>gi|296235588|ref|XP_002762961.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Callithrix
           jacchus]
          Length = 518

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 78/331 (23%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         +            + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGMANQEPNNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +     +A  V                    G  D 
Sbjct: 59  PLAIVEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLFATQNGDVGCYGNMDE 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184
           F++   R                  E   + + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKERTLTLINVYCPHADPGRPERLVFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDSVNLECFEEDPGRKWMDGLLSN 231

Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                               ++L     IDY + D+        
Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRIDYVLGDRTL------ 285

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +          SDHCP+     
Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312


>gi|283456347|ref|YP_003360911.1| exodeoxyribonuclease III [Bifidobacterium dentium Bd1]
 gi|283102981|gb|ADB10087.1| xth Exodeoxyribonuclease III [Bifidobacterium dentium Bd1]
          Length = 277

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 71/282 (25%), Gaps = 42/282 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCI----FYSTERLINHSKRDS 106
           +    +  +A     DI  +QE+ +    +  +F +  +        + +  ++      
Sbjct: 7   AKRKGIEIWAGRNTPDIWCMQEVRAPQHEIDPIFDEFGFEYSTAGKIADQSELDRLNEVC 66

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  + +      + ++        D  S    R     +    G  + V+ +++ +
Sbjct: 67  RIKGRAGVGLLSALPVIDKRYGLPGLDDDVDS---GRWIEADVKTPQGYIVTVVCVYVHA 123

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216
               D            L    + +     +        V+ GDFN              
Sbjct: 124 GNTDD--PAKMEQKYRFLDTMLERMGQLRDEAAHGGRQSVLCGDFNIAHTPLDIKNAKAN 181

Query: 217 ------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFV 261
                          K +   + +                   +           IDY  
Sbjct: 182 ETHAGFLPEERAYVDKWLGELEFVDVMRNLAGDIQGPYTWWSQRGRAFDNNVGWRIDYQF 241

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +           +  D   +  KR SDH P++I YD
Sbjct: 242 ATPELAESACG-------FVIDKAPTYDKRWSDHAPLTITYD 276


>gi|237726359|ref|ZP_04556840.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434885|gb|EEO44962.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 353

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 91/309 (29%), Gaps = 74/309 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   +   ++++V++N+++   +                     +     + D++  QE 
Sbjct: 94  PTKYANENRLKIVTYNVHSFGNEITGFS-----------AKEFAEMMNKEETDVLCFQEY 142

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  +   +NT+            +   S      + A+  +      Q+       
Sbjct: 143 RGNGDFTEQDLQNTYA----------KTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTN 192

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD----------------------S 172
           +         A+   +++ G  I ++++H+++  F                         
Sbjct: 193 N--------GAIWADLDVKGMTIRIINVHMQTTNFDRMRSKAAQARGAQDEEQERAIYLD 244

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
             + +  +    + QA+ +   I   +    P ++ GDFN         +     +    
Sbjct: 245 YSDNFRENTVRRAGQAEQISSLINATE---YPLIVCGDFNDPPG-TFTYETLKSGLKDG- 299

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                 +   +      +L   + IDY          L    +  I Y+          +
Sbjct: 300 -FQTAGEGYGATYRGVHHL---LRIDYLFHS----TLLEGIKYKVIPYD----------M 341

Query: 293 SDHCPISID 301
           SDH P+ ++
Sbjct: 342 SDHNPVYLE 350


>gi|227509865|ref|ZP_03939914.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190789|gb|EEI70856.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 252

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 73/301 (24%), Gaps = 78/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                        +  + LDAD   +QE          
Sbjct: 1   MKFISWNVNGLRAVVKKDF---------------AETFQKLDADFFCIQETKMQEG-QLK 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                       +  PL  +    +   + 
Sbjct: 45  LDLPGYRQYFNYAERKGYSGTAIF-----------------AKDEPLTVSYGIQAPEFDH 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +++  ++ +        +               L        +S  
Sbjct: 88  EGRAITLEYPN--FYLVTSYVPNSGAKLKRLDFRMGWDKAFHAYLNQL--------DSHK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   +                       +  +     +  F      + +  
Sbjct: 138 PVILCGDLNVAHHEIDLKNPKSNHHNAGFTDEERQSFTKLLDQGFMDTFRHFYPDKEDIY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV  +     +        ++            SDHCP+ 
Sbjct: 198 SWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIF-----------GSDHCPVE 246

Query: 300 I 300
           +
Sbjct: 247 L 247


>gi|145346298|ref|XP_001417629.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577856|gb|ABO95922.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 474

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/287 (10%), Positives = 84/287 (29%), Gaps = 50/287 (17%)

Query: 57  LRQYAKNLDAD--IVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           ++     L +D  ++ LQE  + S   V ++     W   ++     NH    S   ++ 
Sbjct: 1   MKALFDALGSDLKVICLQETKLSSSGDVERLERVEGWDGAHAVCESSNHRVGYSGVAVYW 60

Query: 113 ------------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                        +  +         +  +    D  +RA         + ++  +  + 
Sbjct: 61  RSNEICPTSIERGVCAKGDAGESTMWAGEIAPFADDATRAKEIDGEGRALWVDFGEFVLC 120

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---- 216
            +++ +     +++   +   +        L+      +E     ++ GD+N   +    
Sbjct: 121 TVYVPAVFGDPAVDEKTAERAAFKRDFLSALEARYKSLRERGRNVILCGDWNIAPSWKLD 180

Query: 217 -----------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---------RNKIP 256
                         + D     +  +  +  F +   +  +A                  
Sbjct: 181 RADEDPNAVEPRNPSRDWLAAQLAGDAMVDVFREFFPTLGDAFTCWNVASGAQLSNYGSR 240

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           IDYF+ D+      ++       +            SDH P+ ++ +
Sbjct: 241 IDYFLCDRAVTLKRVRGVGVAQKFE----------GSDHAPVYLELE 277


>gi|297710110|ref|XP_002831748.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Pongo
           abelii]
          Length = 518

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 77/331 (23%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         +            + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +      A  V                    G  D 
Sbjct: 59  PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184
           F++   R                  E   K + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEDDPGRKWMDSLLSN 231

Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                               ++L     +DY + D+        
Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAITGARHLNYGSRLDYVLGDRTL------ 285

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I   +          SDHCP+     
Sbjct: 286 ----VIDTFQASFLLPEVMGSDHCPVGAVLS 312


>gi|296283199|ref|ZP_06861197.1| putative metal-dependent hydrolase [Citromicrobium bathyomarinum
           JL354]
          Length = 237

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 79/279 (28%), Gaps = 55/279 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVA 81
             +L S+NI+     +              D + + +    +DAD+V LQE         
Sbjct: 5   TFKLASYNIHKAVGTDR-----------KRDPSRILKVLGEVDADVVVLQEADRRFGQRE 53

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +  P            +    + DS       I VR+    +      +           
Sbjct: 54  RTLPDFLVEQHTDYMPVPFDVQHDSMGWHGNTIMVRRDIAVLEHDVLHIPYL-------E 106

Query: 142 NRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R  V   + +  G ++ V  +HL               S     +QA+ + + + +  +
Sbjct: 107 PRGVVTATLRLPTGPELTVFGMHLDL-------------SGLWRVRQARAIAE-LARVAQ 152

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++AGD N      G   +F +     D              +  + R    +D  
Sbjct: 153 EQRPTLLAGDLNEWRPNGGCLKEFGRHFTVLDC-----------GRSFHSQRPMGRLDRI 201

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +             F               R SDH P+ 
Sbjct: 202 IHGAPL----EAVEFGVHH------SPLASRASDHLPVW 230


>gi|268318601|ref|YP_003292257.1| exodeoxyribonuclease [Lactobacillus johnsonii FI9785]
 gi|262396976|emb|CAX65990.1| exodeoxyribonuclease [Lactobacillus johnsonii FI9785]
          Length = 275

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 89/305 (29%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWNI++L+        +  + R+      +    K  DADI+ +QE    +     
Sbjct: 1   MRLISWNIDSLNAALTSDSPRAQLTRS------VLNTIKEKDADIIAIQETKLRSTGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +     +  S  +     +       KN    + + P +GA D+    G  
Sbjct: 55  KHQEVLAEMFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPAIGAPDTMDYEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  ++  Q L        +   
Sbjct: 114 -----ILTLEFDNYYVTQVYTPNSGNELKRLEDRQIWDEKYTEYLQKL--------DKSK 160

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GD+N                   +       +  +        F K   +     
Sbjct: 161 PVIASGDYNVAHTPIDLKHPENNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNIEGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +    +           DHCPI
Sbjct: 221 SWWAQRVRTSKANNSGWRIDYYIVSDRIADQVTKSEMIDTGDRK-----------DHCPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 MLEIN 274


>gi|223996013|ref|XP_002287680.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976796|gb|EED95123.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 453

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 84/295 (28%), Gaps = 45/295 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + A  + +VSWNI   S  +   L  N   R+     L+R        D++ LQE    N
Sbjct: 31  TNALSLSVVSWNI---SSAQPSQLAPNIALRSQRAPGLIRDECIRSLPDVIALQETSHPN 87

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +F               +      +     A         V       L +     
Sbjct: 88  QGTDMFG------------TGSTGYSYVSIGTQVA---HHTAEYVDLLVKRELYSHCQTI 132

Query: 139 RAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              N  AV   +   NG +I V  +HL               +     +  + +   I  
Sbjct: 133 NLQNLPAVAATINLPNGTRIAVASLHLPHTS----------QAAPERKRMCEAIMKGIVS 182

Query: 198 KKESLVPFVIAGDFNRKINYLGNND--------DFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +  +    ++ GDFN +       +        D WK +  +D    F            
Sbjct: 183 QVGNN--IILLGDFNMRKAEDKPTEGLVGGGWMDAWKVVTNSDKSRNFTWNSHDNLYHGP 240

Query: 250 -NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            N +     D              +         + ++ +G  LSDH  +++  D
Sbjct: 241 DNFQFTCRFDRCYARGAKLALREFQLI-----GNNTVEGKGDYLSDHFGLAVRLD 290


>gi|217972246|ref|YP_002356997.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS223]
 gi|217497381|gb|ACK45574.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS223]
          Length = 408

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/376 (11%), Positives = 91/376 (24%), Gaps = 98/376 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +++ S N+    E            S  +       L ++  +   DIV  QE+ S   +
Sbjct: 30  IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGFQEVFSPEPL 89

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSF 137
            ++  +    + ++                  A+A R   V +         +     S 
Sbjct: 90  KRIASEQG-LVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSS 148

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176
             A +R+ +   VE+    K     +H KS     +LE                      
Sbjct: 149 EFAFSRKVLRATVEVPHIGKCDFYVVHFKSKRAGLALEPKLFEHQPLEPKRFENQPLGFD 208

Query: 177 -----------------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFN 212
                                     S      +A  L    + +++ S  P ++ GDFN
Sbjct: 209 NSAPAASMKLHSETQLLTEQALGRWASTIQRGAEAALLFNGILVRRQASKHPVIVMGDFN 268

Query: 213 R---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----------- 246
                            ++           +        F + +                
Sbjct: 269 DSLTMGALDALTIQGESLHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDS 328

Query: 247 --------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK------ 286
                          +        +DY ++         +     + Y   D        
Sbjct: 329 LTGNTAYHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEY 388

Query: 287 SRGKRLSDHCPISIDY 302
            R    +DH P+ ++ 
Sbjct: 389 ERDAYSTDHAPVIVEL 404


>gi|312884597|ref|ZP_07744301.1| hypothetical protein VIBC2010_15519 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367909|gb|EFP95457.1| hypothetical protein VIBC2010_15519 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 457

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 83/291 (28%), Gaps = 34/291 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T +    +R+ ++N+             +     +   T+L         D++ LQE  S
Sbjct: 179 TEAREHALRIATYNLWM---------IPSVSLDISERATILDHTLSGY--DVLTLQEAFS 227

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +    +F   +   F       +    DS       +    +   +   S        +
Sbjct: 228 -SDRDALFDALSGEYF----YRTDVVGGDSMALYDGGVVTLSRYPILETDSIVFEHCSGT 282

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              A  +  V   ++  G+   + + HL SF    +          L +         +T
Sbjct: 283 DCYAD-KGIVYTKIDKLGQIYHIFNTHLASFSTPAAKRLRRLQLGLLRTF-------MLT 334

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
           ++       + AGDFN   N               D    +   +D+  +   N   +  
Sbjct: 335 KEIPQDEAVIFAGDFNIDKNNDFLEYLLMLATLEVDP-PLYTGYRDATFDPRINPYAQSQ 393

Query: 256 --------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                    +DY ++     +     +  ++             LSDH  +
Sbjct: 394 YSGGDTIEYLDYILVSSEHKRARQNINQVKLNQRVTAATWGEWHLSDHFGV 444


>gi|228906140|ref|ZP_04070029.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           200]
 gi|228853549|gb|EEM98317.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           200]
          Length = 263

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 72/269 (26%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +                   ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGVIAGWDENKHNLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVVFNGTNRNVISDHFGVEVQLD 262


>gi|194221192|ref|XP_001490024.2| PREDICTED: phosphodiesterase 12 [Equus caballus]
          Length = 609

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 79/314 (25%), Gaps = 33/314 (10%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 354

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + P           R+  H    +       ++  +             L  + 
Sbjct: 355 NVFTDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFHEALESDPLHKEL 414

Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189
                    A E +++ +   ++ VL     S    C  ++    +     +   Q    
Sbjct: 415 LEKLVLYPSAQERVLQRSSVLQVSVLQSRQDSSKKICVANTHLYWHPKGGYIRLIQMAVA 474

Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236
                 ++      +P +  GDFN   +               + D      +   ++  
Sbjct: 475 LAHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEERCNMSL 534

Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290
               K           N        +DY  +D        +    S              
Sbjct: 535 AHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVS 594

Query: 291 RLSDHCPISIDYDF 304
             SDH  +  D  +
Sbjct: 595 HPSDHIALVCDLKW 608


>gi|21231446|ref|NP_637363.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768500|ref|YP_243262.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21113117|gb|AAM41287.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573832|gb|AAY49242.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 356

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 69/302 (22%), Gaps = 70/302 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
            + ++N+N ++                     L Q+ +    DIV LQE+ S        
Sbjct: 7   TIATYNVNGIAS----------------RLPHLLQWLQREQPDIVGLQELKSTQEA---- 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                       R   +            +A+  +    ++    L              
Sbjct: 47  ------FPEQAIRDAGYGVIWQGQRSWNGVALLARGAEPVEIRRGLPWDPADTQSRYLEA 100

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           A+  ++        V  ++L +       +  Y        +  Q L            P
Sbjct: 101 AIHGVI--------VGCLYLPNGNPQPGPKFDYK------LKWFQRLLRHAATLVALPHP 146

Query: 205 FVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             + GDFN                       +   +  +                     
Sbjct: 147 VALIGDFNVVPTDAHIYDPKGWRKDALLQPESRAAYAQLLAQGWTDSLQAIHGDAPVYTF 206

Query: 250 NLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +          ID+ ++++     L                   ++ SDH P  I 
Sbjct: 207 WDYFRQHFARDRGLRIDHLLLNRTLAAGLRDAGVG-------KWVRALEKASDHAPTWIT 259

Query: 302 YD 303
            D
Sbjct: 260 VD 261


>gi|306824688|ref|ZP_07458032.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432899|gb|EFM35871.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 275

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQILVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDTFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVSDKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIE 274


>gi|315042279|ref|XP_003170516.1| endonuclease/exonuclease/phosphatase [Arthroderma gypseum CBS
           118893]
 gi|311345550|gb|EFR04753.1| endonuclease/exonuclease/phosphatase [Arthroderma gypseum CBS
           118893]
          Length = 294

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 78/294 (26%), Gaps = 22/294 (7%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82
            R+++ NI   +     +  +    R       L  Y   L+ +  V LQE         
Sbjct: 8   FRILTHNIRY-ATTSPSTGEQPWSVRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVTDV 65

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNND------IHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +   N+     S       +      +       ++ I  R    ++ ++    L    S
Sbjct: 66  LAGLNSRPHASSQGDDGKWAFYGVGRNDGKQAGEYSPIFYRPAVWKLQEKETVWLSETPS 125

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               G   A   +V I      V +    +   L    +          + A+ +   I 
Sbjct: 126 VPSKGWDAASIRIVTIG-----VFNHLATNTTLLAMNTHLDDQGSKSRHESAKLILSLIG 180

Query: 197 QKKESLVPF---VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANK 249
           +            +AGDFN         +         D+  R P       +       
Sbjct: 181 KYLARHPEIKGNFLAGDFNSDEGQEAYREFTKPGSSIVDTYKRVPASQRYGDEITFTGFD 240

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY ++   +    I  + +       +        SDH  +  D  
Sbjct: 241 GKTQGSRIDYVMVGPQSSSSAIPFTVN-GYAVMPNRFENRIYNSDHRAVVADVT 293


>gi|222082743|ref|YP_002542108.1| endonuclease/exonuclease/phosphatase protein [Agrobacterium
           radiobacter K84]
 gi|221727422|gb|ACM30511.1| endonuclease/exonuclease/phosphatase protein [Agrobacterium
           radiobacter K84]
          Length = 279

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 80/281 (28%), Gaps = 55/281 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + S+N++     +              D   + +    +DAD++ LQE  +         
Sbjct: 38  IASYNVHKCVGADRRF-----------DPERISRVIHEIDADVIGLQEADTRFGERTGL- 85

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            +   +   T  +       S         V  K   V       L           R A
Sbjct: 86  LDLRRLERETGLIPVPVAGASKAHGWHGNVVLFKQGTVRDVHQISLPG------LEPRGA 139

Query: 146 VELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           +   +E   G  + ++  HL                    +QQA+ + + +++  ++  P
Sbjct: 140 LLAEIELARGGVLRIIAAHLGLL-------------LRSRAQQARLIVELMSR--DNDTP 184

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GD N         +         ++             +  +    + +D  + ++
Sbjct: 185 TILLGDLN---------EWRLGDRSSLNTFQAAFGPLPPAVPSFPSTLPLLALDRIMANR 235

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDYD 303
           +            I   E       +  SDH PI   +  +
Sbjct: 236 SGL----------ISTVEVHDSPLARVASDHLPIKAVVSLE 266


>gi|84500561|ref|ZP_00998810.1| hypothetical protein OB2597_11401 [Oceanicola batsensis HTCC2597]
 gi|84391514|gb|EAQ03846.1| hypothetical protein OB2597_11401 [Oceanicola batsensis HTCC2597]
          Length = 266

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 75/282 (26%), Gaps = 51/282 (18%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQE------------------------MGSYNAVAK 82
                  +  +  +   +  DI+ LQE                              V++
Sbjct: 7   NAWGGRLFEEMVAWIAEVQPDILCLQETVFAPGSPSAWLDYRDGDTVLPQRADVLRDVSR 66

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSR 139
             P +      +    +    R+  +    A  +    + V Q     +           
Sbjct: 67  ALPDHGMSFCPAACGNLWLGNREVPSLWGLATFLHPDLMIVGQSQGFVHGAFSPDGFGDH 126

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +R A  + V    +    + +         + +        +  +QA+     +    
Sbjct: 127 PRSRTAHVVRVWHPDEG--GITVGHMHGLRDPNGKMDT----PVRGEQARKFATMVQSVL 180

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +   P V  GDFN          + ++ +          +        +   + +   DY
Sbjct: 181 QPGDPVVACGDFNVLPGS-----ETFRVMARVAPYNLVTQRGFDGTRTSHYEKPERWADY 235

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +++          +F  I   E         +SDHCP+ +D
Sbjct: 236 MLVNGPLKD----AAFDVIRTPE---------ISDHCPLVLD 264


>gi|222823091|ref|YP_002574664.1| exodeoxyribonuclease III [Campylobacter lari RM2100]
 gi|222538312|gb|ACM63413.1| exodeoxyribonuclease III [Campylobacter lari RM2100]
          Length = 252

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  + +  + D +  QE+    A  + 
Sbjct: 1   MKLLSWNVNGLRAICDKNA---------------LDWIEKENIDFIGFQEI---KAHEEK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +                    + F     R
Sbjct: 43  FPKRIYEYDFKHMYFNSAKRA-----GYSGVMSLLNF-------DCETKKCEFFDDDEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   +      +        L            
Sbjct: 91  -----VLEHRFKNIALFNIYFPNGQKDEERLSFKMKFYNDFLVYLDKLLK-------EGK 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F           
Sbjct: 139 EIIICGDVNTAHREIDLTHPKANEKTSGFLPIERAWIDDLLELGFVDTFRYVNGDIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +       L      + ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISNGLKDKLKNAFIRDDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|288905926|ref|YP_003431148.1| 3'-exo-deoxyribonuclease [Streptococcus gallolyticus UCN34]
 gi|306831945|ref|ZP_07465100.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978892|ref|YP_004288608.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732652|emb|CBI14224.1| putative 3'-exo-deoxyribonuclease [Streptococcus gallolyticus
           UCN34]
 gi|304425871|gb|EFM28988.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178820|emb|CBZ48864.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 275

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAVMSR------AVIDTLVTENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++    +   S  +     +       K+      SYP +GA D+    G  
Sbjct: 55  KHLQILQDYFPEYEVSWRSSVEPARKGYAGTMFLYKSSLTPSISYPEIGAPDTMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   K +V  ++  +                  +     L            
Sbjct: 114 -----IITLEFDKFFVTQVYTPNAGDGLKRLAERQIWDEKYADYLAELDQV--------K 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        +  
Sbjct: 161 PVLATGDYNVAHKEIDLAHPSSNRRSPGFTDEERAGFTNLLAKGFTDTFRYIHGDIPDVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 SWWAQRSKTSKINNSGWRIDYWLTSSRIADKITKSEMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|283780185|ref|YP_003370940.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
 gi|283438638|gb|ADB17080.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
          Length = 325

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 84/293 (28%), Gaps = 38/293 (12%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                +   +R+ ++NI    E               +   ++ +  +    D++ +QE+
Sbjct: 45  APPPRLDATIRVATFNIQVFGED---------KMADPAAMGVIVEILRQF--DVIAIQEI 93

Query: 75  GS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLL 131
            +   + + ++         +  +  I     +S +    A    R        Q Y + 
Sbjct: 94  RAVRQDLMPRLVELINAGGKHQYDYCIGPRLGNSVSKEQYAFVFDRTSIEVDRNQLYTVD 153

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              +   R               K      +++ +   +   E                +
Sbjct: 154 DPDNLLHREPLVGWFRCRAAEPDKAFTFSLVNVHTDPDIVDYELD----------WLDDV 203

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              +   +      ++ GDFN        ND   + +    SL++      +    N   
Sbjct: 204 FFAVRDDQRREDDVIMLGDFNV-------NDKNLRQLGSVPSLVKVVAGVPTNTRGN--- 253

Query: 252 RNKIPIDYF-VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 D       +  +F  +    + +   +  + +  ++SDH P+  ++ 
Sbjct: 254 ---AQYDNILFAGTSTTEFTGRGGVYDFMREFNLTQEQALQVSDHLPVWAEFS 303


>gi|21220603|ref|NP_626382.1| hypothetical protein SCO2125 [Streptomyces coelicolor A3(2)]
 gi|256788258|ref|ZP_05526689.1| hypothetical protein SlivT_27549 [Streptomyces lividans TK24]
 gi|289772150|ref|ZP_06531528.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|5689935|emb|CAB51973.1| hypothetical protein [Streptomyces coelicolor A3(2)]
 gi|289702349|gb|EFD69778.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 253

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 72/294 (24%), Gaps = 57/294 (19%)

Query: 13  LVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
            +P + +       +R++S+NI +L                  D   L +  K    D+V
Sbjct: 7   ALPNSRTEPDGSAVIRVLSYNIRSL----------------RDDTDALARVIKACAPDLV 50

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSY 128
            LQE               W    +           S        A+       V +   
Sbjct: 51  LLQEAP---------RFFRWRKKITRLAAAGDLVLLSGGGTAAGPALLCSLRATVERTED 101

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            LL       R   R     +V I G +I VL  HL             S       +QA
Sbjct: 102 VLLPLTPGRHR---RGIAAAVVRIGGARIGVLSSHL-------------SLDADERHEQA 145

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L D +          V  GD N +                      +           
Sbjct: 146 GLLLDHLAALGVKHA--VAGGDLNERPGGRTFRRL------GEGLRDCWTAAPWGGEYTF 197

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   ID   + +                 EDD+    +  +DH P+    
Sbjct: 198 PATAPDRRIDAVFVTEGIEVLGCGVPSGLAGVAEDDL----RAATDHLPVLTAL 247


>gi|325185938|emb|CCA20442.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 452

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/351 (13%), Positives = 96/351 (27%), Gaps = 75/351 (21%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YN 78
           +K+ +V +NI    L+ Q        S     +   +L +  + LDADI+ L+E+   + 
Sbjct: 103 KKITIVQFNILARNLASQTHFPYVIESRLTWDNRKQILLRQLEGLDADILCLEELSDYWT 162

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                  +  +   Y     I+ S            I  +K    + +          +F
Sbjct: 163 FFKSELGERGYDSVYVKRPSIHVSNWSGEKKQDGCGIFFKKDKFELKE------CESINF 216

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
               +R A+  L++ + +   +  +      +     +          ++   L   +  
Sbjct: 217 HDTHDRVAILALLQ-SKQFAQLFLVGCTHLWWNSKKVDHQMAELYEFEEEVIRLCSDMKD 275

Query: 198 KK----------ESLVPFVIAGDFNRKINYLGNN------------DDFWKTIDPNDSLI 235
           K               P ++ GDFN        +            +   +         
Sbjct: 276 KYQQEIRSSITGGPNFPVILCGDFNNTPQSAIYDHMHNSFLQRPNMEGIREEFRSAYRYY 335

Query: 236 RFPKEKDS---------------RCNANKNLRNKIPIDYFVMDQN--------------- 265
           R  +   S                 +   N R    IDY     +               
Sbjct: 336 RLNEMAQSSSVSSMKEEIVGEFEPPHTTVNYRRCWTIDYIWYSSSNLVPCRILEIPSEAV 395

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKR------------LSDHCPISIDYDF 304
                    + E L + D  +  G++             SDH P+  + +F
Sbjct: 396 LRAEEGPPGWFERLAHLDTFQKSGRKQGSQNGIPNSKCGSDHIPLFAELEF 446


>gi|226948935|ref|YP_002804026.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|226842849|gb|ACO85515.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A2 str. Kyoto]
          Length = 263

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 89/297 (29%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N +               ++       L +     + D++ LQE+        +
Sbjct: 1   MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49

Query: 84  FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           F       F             +  +++        +     +A+  K+    ++S+ + 
Sbjct: 50  FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYIS 109

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +KD       R+ ++  ++ N   I+    HL    + D  E+        L  Q   L
Sbjct: 110 KSKDKNFWK-TRKIIKCKIDYNNNPIYFYSCHL--GWWDDEEED--------LKSQVNKL 158

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----N 246
              +          ++ GD+N          D+       D       + +        +
Sbjct: 159 VQELK----EKETCILMGDYNNDAFLNNKGYDYLINKKLKDIYHLARSKDNGVTAIGDID 214

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K     + +D  + ++N      +  F+ I             +SDH  +    +
Sbjct: 215 GWKGNTKDMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262


>gi|241950641|ref|XP_002418043.1| endonuclease/exonuclease/phosphatase, putative [Candida
           dubliniensis CD36]
 gi|223641382|emb|CAX43342.1| endonuclease/exonuclease/phosphatase, putative [Candida
           dubliniensis CD36]
          Length = 303

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 89/311 (28%), Gaps = 19/311 (6%)

Query: 1   MIRKYVLALV---FFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYT 55
           M+ + +  +      ++  + +  A  + + S N+   + + G    +     R      
Sbjct: 1   MLGRILFIIFHWTLLVLADSETSDALDITIYSNNVRYAASRRGRGRDELPWKTRKHGVVD 60

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--IHTA 113
            ++     +   +V LQE+        +   N                RD  +    ++ 
Sbjct: 61  AIKAQ-SGVYPILVGLQEVTHTQLKDILKGLNKKHSGDDGRWTHFGVGRDDGHKKGEYSP 119

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           I        +L  +Y  L             A +  +   G    V    + +F      
Sbjct: 120 IIYNTAEWNLLNGTYKWLSLTPDKPSKYP-GASKKRIVTMGTFFHVKSGKVVNFVNTHLD 178

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 S       A+ +  +I     +  P  + GDFN  ++           +     
Sbjct: 179 H----RSVKSREYSAKLIIQYIKS-IPNYFPTFLCGDFN-SLDTDKAYATISHYMVDASH 232

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRL 292
           +     + + +  +         ID+     +          + + Y   D++   G R 
Sbjct: 233 VAEKKYDTNLKTFSGFGNGTSYSIDFIW---SPLDTNNHSGINALFYTVLDNLFDGGYRF 289

Query: 293 SDHCPISIDYD 303
           SDH PI   Y 
Sbjct: 290 SDHRPIMARYS 300


>gi|21553771|gb|AAM62864.1| unknown [Arabidopsis thaliana]
          Length = 426

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 85/297 (28%), Gaps = 47/297 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+    E   ++L              +    +     ++  QE+     +  +
Sbjct: 158 LKILSYNV-WFREDLELNL----------RMRAIGHLIQLHSPHLICFQEVTPE--IYDI 204

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F K+ W   YS            +   +  +  +        +S+         +    R
Sbjct: 205 FRKSNWWKAYS---CSVSVDVAVSRGYYCMLLSKLGVKSFSSKSF--------GNSIMGR 253

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 VE+ G K +     HL+S C                 +QA+   + +       
Sbjct: 254 ELSIAEVEVPGRKPLVFATSHLESPCPGPPKW--DQMFSRERVEQAKEAIEILR----PN 307

Query: 203 VPFVIAGDFNR----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
              +  GD N        +   +             + F  +  +    + N   +  +D
Sbjct: 308 ANVIFGGDMNWCDKLDGKFPLPDKWVDVWEVLKPGDLGFTYDTKANPMLSGNRALQKRLD 367

Query: 259 YFVMDQN-----AYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303
             +   +       + + +E+   + Y ++       +        SDH  + +   
Sbjct: 368 RILCRLDDYKLGGIEMVGKEAIPGLSYVKEKKVRGDIKKLELPVLPSDHFGLLVTLS 424


>gi|30682419|ref|NP_563894.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|4835775|gb|AAD30241.1|AC007296_2 EST gb|F14156 comes from this gene [Arabidopsis thaliana]
 gi|22135816|gb|AAM91094.1| At1g11800/F25C20_3 [Arabidopsis thaliana]
 gi|23308397|gb|AAN18168.1| At1g11800/F25C20_3 [Arabidopsis thaliana]
 gi|332190667|gb|AEE28788.1| endonuclease/exonuclease/phosphatase-like protein [Arabidopsis
           thaliana]
          Length = 441

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 85/297 (28%), Gaps = 47/297 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+    E   ++L              +    +     ++  QE+     +  +
Sbjct: 173 LKILSYNV-WFREDLELNL----------RMRAIGHLIQLHSPHLICFQEVTPE--IYDI 219

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F K+ W   YS            +   +  +  +        +S+         +    R
Sbjct: 220 FRKSNWWKAYS---CSVSVDVAVSRGYYCMLLSKLGVKSFSSKSF--------GNSIMGR 268

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 VE+ G K +     HL+S C                 +QA+   + +       
Sbjct: 269 ELSIAEVEVPGRKPLVFATSHLESPCPGPPKW--DQMFSRERVEQAKEAIEILR----PN 322

Query: 203 VPFVIAGDFNR----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
              +  GD N        +   +             + F  +  +    + N   +  +D
Sbjct: 323 ANVIFGGDMNWCDKLDGKFPLPDKWVDVWEVLKPGDLGFTYDTKANPMLSGNRALQKRLD 382

Query: 259 YFVMDQN-----AYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303
             +   +       + + +E+   + Y ++       +        SDH  + +   
Sbjct: 383 RILCRLDDYKLGGIEMVGKEAIPGLSYVKEKKVRGDIKKLELPVLPSDHFGLLVTLS 439


>gi|291393887|ref|XP_002713308.1| PREDICTED: 2,5-phosphodiesterase 12-like [Oryctolagus cuniculus]
          Length = 610

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 78/316 (24%), Gaps = 37/316 (11%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 296 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 355

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 + P           R+  H    +     +  ++  ++     ++         
Sbjct: 356 AVFADSLVPALEAFGLEGVFRIKQHEGLATFYR-RSKFSLLSQHDIAFHEALQSDPLHKE 414

Query: 137 FSRAGNRRAVELL-VEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLLSQQAQ- 189
                    +    V      + V  +          C  ++    +     +   Q   
Sbjct: 415 LLEKLAVYPLAQEKVLQRSSVLQVSVLQSTKDSSKKICVANTHLYWHPKGGYIRLIQMAV 474

Query: 190 --WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                  ++    + +P +  GDFN      G          P D        ++ RCN 
Sbjct: 475 ALAHIRHVSCDLYAGIPVIFCGDFNSTP-SAGMYHFVINGNVPEDHEDWTSNGEEERCNM 533

Query: 248 NKNLRNK------------------IPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSR 288
           +     K                    +DY  +D        +    S            
Sbjct: 534 SLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPS 593

Query: 289 GKRLSDHCPISIDYDF 304
               SDH  +  D  +
Sbjct: 594 VSHPSDHIALVCDLKW 609


>gi|257889202|ref|ZP_05668855.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,141,733]
 gi|257825274|gb|EEV52188.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,141,733]
          Length = 274

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 83/310 (26%), Gaps = 66/310 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++ N +  L E+                   + Q   +   D++ LQE+       +
Sbjct: 1   MKIMTLNTHSWLEEEP------------REKLKQIAQKICHEQYDVIALQEVNQTMDAKR 48

Query: 83  V----------------FPKNTWCIFY--------STERLINHSKRDSNNDIHTAIAVRK 118
           +                   + +             T                   A+  
Sbjct: 49  LTSEQLKNFSQVQEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLS 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +      L+           R+ +     +  + I V   H   +    S      
Sbjct: 109 KQPLI--SQTHLVSETKEKEDYHTRKILVGQTSVKSQCITVASCHFSWWADEKSG----- 161

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                 + + + L+  +        P  + GDFN      G +      +   D+     
Sbjct: 162 -----FAFEWKELEASL---APLTTPLYLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQ 213

Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           K++         +  +N +  + IDY  + Q+ +            Y        G  +S
Sbjct: 214 KKQAEATIEKRIDGWENNKEGLRIDYIYVPQDCF---------VTSYQRIFDGENGPIVS 264

Query: 294 DHCPISIDYD 303
           DH  +++  +
Sbjct: 265 DHYGVAVTLE 274


>gi|116193731|ref|XP_001222678.1| hypothetical protein CHGG_06583 [Chaetomium globosum CBS 148.51]
 gi|88182496|gb|EAQ89964.1| hypothetical protein CHGG_06583 [Chaetomium globosum CBS 148.51]
          Length = 646

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 80/339 (23%), Gaps = 79/339 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
            +R+ +WN           +   ++ R  +  T L+     L+ADIV +QE  +   +  
Sbjct: 2   PLRITTWN----------GITAVTLPRARTKLTSLQAMFDTLEADIVVMQETKIQRKDLR 51

Query: 81  AKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKN-------VRVLQQSYPLLG 132
             +     W +F+S  +    +S             +R +               +  L 
Sbjct: 52  DDMVLVPGWDVFFSLPKYKKGYSGVAIYTRSSKCCPIRAEEGITGTLCPPNSSTKFQHLP 111

Query: 133 AKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-- 188
                        +   V+      +   + +   +F  +               +QA  
Sbjct: 112 VDQQIGGYPTPGQLSDYVDEPTLDSEGRCVILEFPAFVLIGVYSPATRDETRDEFRQAYI 171

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF----------- 237
             +   +           + GD N   +         +      +L  F           
Sbjct: 172 NAIDVRVRNLVAMGKQVFLCGDLNIIRSEQDTAGLAERLRKEEMTLDDFFSTPSRCFLNH 231

Query: 238 -----------------------------PKEKDSRCNANKNL----RNKIPIDYFVMDQ 264
                                         +     C   +           IDY +   
Sbjct: 232 IVFGGHVAGEREEGREEPVLWDLCREFHPTRPGMYTCWDTRKNARPGNFGSRIDYVLCSS 291

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               + I  +              G   SDHCP+    D
Sbjct: 292 GIKDWFIDSNIQ-----------EGLLGSDHCPVYATID 319


>gi|119776098|ref|YP_928838.1| hypothetical protein Sama_2966 [Shewanella amazonensis SB2B]
 gi|119768598|gb|ABM01169.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 394

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 92/354 (25%), Gaps = 78/354 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNS---VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           + + N+         +   +     ++       LR    +L+ADI+  QE+ S + +  
Sbjct: 41  IATLNLFNFLAPPAAAYEFDRIYSNEQWQKKCNWLRHCVSSLEADIIGFQEVFSVDELKA 100

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQSYPLLGAKDSFSR 139
           +  +  +  F   +                AIA R      V V      L         
Sbjct: 101 LMLELGYPHFAVVDEPGCEDYVC--RAPVVAIASRLPLLEVVAVEPDPAALAAMDLKADF 158

Query: 140 AGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-------- 188
              RR +   V +N      I+VL    +   F          +  LL+ +A        
Sbjct: 159 RFGRRVLRATVNLNDWGMLDIYVLHFKSQRPLFEPEALGDMQAAPRLLAHRALGSFASSA 218

Query: 189 -------QWLKDWITQKKESLVPFVIAGDFNRKINYLG---------------------- 219
                     +  I ++ E+  P VI GDFN  ++                         
Sbjct: 219 RRGFEAMLLYQAMIMRRDETAHPMVIMGDFNSGLDAAEFRGFWLGADAIHGNDKQAAGLG 278

Query: 220 ------------------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                                       F +    +           +R   +       
Sbjct: 279 GLSEQAFANAISHFTLKDASVLFLEGQLFDRQSGGHHGTDSTEDLSWARRPTHYLGSRGS 338

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCPISIDYD 303
            +D+ ++ Q+    L         ++  D         R    SDH  + +  +
Sbjct: 339 LLDHILLSQDFDGALAPARGRVCHFSVFDEHLRSPKYERDSESSDHAALVVGLE 392


>gi|325273997|ref|ZP_08140156.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51]
 gi|324100886|gb|EGB98573.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51]
          Length = 284

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 83/292 (28%), Gaps = 58/292 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +          +   + +     D D+V L
Sbjct: 28  PDDGRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHNGRAGNLQKIGKLLS--DFDLVAL 85

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE    +  +    +                  R+       +  V  +    L + +PL
Sbjct: 86  QEADGGSLRSGFVNQVEHLAQLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQLLEDHPL 145

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R A+ +        + V+ +HL                    + Q  +
Sbjct: 146 PGPAG-------RGAILVRFGEGEDALIVVMMHLALG-------------AKTRALQLGY 185

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +++ I          V+ GD N     L  +    + +      +              +
Sbjct: 186 IRELIGGY----RHQVLMGDMNTHAADLLEHSPL-RDLGLVAPQVEAT---------FPS 231

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R +  +D+ ++  +     ++     I              SDH P++++ 
Sbjct: 232 WRPQRCLDHILLSSSLTLERVEVLAQPI--------------SDHLPVAVEI 269


>gi|311745078|ref|ZP_07718863.1| exodeoxyribonuclease III [Algoriphagus sp. PR1]
 gi|311302328|gb|EAZ81811.2| exodeoxyribonuclease III [Algoriphagus sp. PR1]
          Length = 253

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 86/305 (28%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           +++VS+N+N +                         + K  D +++ LQE+ +       
Sbjct: 1   MKIVSYNVNGIRAAMNKGF---------------LDWLKQTDPEVIGLQEVKAMEDQIDT 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F    + +++   +   +          + +A+  K           L   D   R  
Sbjct: 46  SIFKDLGYKVYWYPAQKKGY----------SGVAILSKITPKSIHHGMGLQKYDDEGRL- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +EI  +    L  +  S    D  +       +   +    +  +I   + +
Sbjct: 95  --------LEIEFEDFSFLSAYFPSGTTGDIRQ-------TFKYEFLDDIYGYIKDLRRT 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNA 247
               +++GD+N     +  ++                          I   +  +   + 
Sbjct: 140 KPNLILSGDYNICHKAIDIHNPVSNKNSSGFLPEERVWMDKFTESGFIDTFRHFNPEPHQ 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY +  ++    L +                  + SDHCPI
Sbjct: 200 YTWWSYRANARAKNLGWRIDYHMATKDMENRLKRSVIL-----------PEAKHSDHCPI 248

Query: 299 SIDYD 303
            ++ +
Sbjct: 249 LVELN 253


>gi|158522531|ref|YP_001530401.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans
           Hxd3]
 gi|158511357|gb|ABW68324.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans
           Hxd3]
          Length = 232

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 81/281 (28%), Gaps = 55/281 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L ++NI+     +G             D          LDADI+ LQE+ +   +   
Sbjct: 7   LKLATYNIHGSVGTDGRF-----------DPARTMAVINQLDADIIALQEVST---IRSD 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +        T   +        +  H    V  ++     +   L     SF +   R
Sbjct: 53  LREWVSGFQAETGMRVIPGMTMFRDAAHYGNVVLTRDAVEHVEHINL-----SFKQREPR 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+ L + ++ ++I ++  HL                 +    Q + L   + +      
Sbjct: 108 GAICLTLSVDDRRICIVATHLGLR-------------AAERRAQVKLLLKVLER--RPAD 152

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
            FV+ GD N  I    +     +          F           +       +D  ++ 
Sbjct: 153 IFVLMGDLNEWIAGARSLRQARR---------FFDHIHTPSTFPARFPLLS--LDRILV- 200

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +      +         K      SDH P+  +  F
Sbjct: 201 -----WPATCLHTIAPLKNPLTK----IASDHLPLRAEIVF 232


>gi|86151219|ref|ZP_01069434.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315123837|ref|YP_004065841.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841566|gb|EAQ58813.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315017559|gb|ADT65652.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 252

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 79/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 1   MKLLSWNVNGLRAICDKNA---------------LDWIAQEKIDFIGFQEI---KAHEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F+    R
Sbjct: 43  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFNDEEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +        L            
Sbjct: 91  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L      + ++            SDH PI 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPIG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|328541790|ref|YP_004301899.1| endonuclease/exonuclease/phosphatase family [polymorphum gilvum
           SL003B-26A1]
 gi|326411542|gb|ADZ68605.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum
           SL003B-26A1]
          Length = 323

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/331 (12%), Positives = 95/331 (28%), Gaps = 60/331 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77
           +RL ++N+ +  E +         +        LR     L AD++ LQE+ +       
Sbjct: 1   MRLATFNLESFGEDD------FDAEALQPRLDALRPTLLALKADVLCLQEVNAQRLERKG 54

Query: 78  ----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                A+  +     +  F+    L       +       +AV  +   V  ++      
Sbjct: 55  TRVFAALDALVAGTPYEDFFRATSLRPDG---TAPADKHNLAVLSRFPVVSSRTIREDHV 111

Query: 134 KDSFSRA--------------GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYS 178
           +    R                +R  +   +++   + + V  +HL++           S
Sbjct: 112 EPPLWRPRSADPLPAGPEPVGFDRPLLHAALDVGLPRPLHVFCVHLRAPIAAPVAGGKLS 171

Query: 179 P---------------SCSLLSQQAQWLKDWITQKKESLVPFVI--AGDFNR-------K 214
                           +      QA  L+  I    ++    +I  AGDFN        +
Sbjct: 172 AVSWGSTAAWAEGYFLASMKRVGQALELRLAIDALFDADPEALIAAAGDFNAVGLESPLR 231

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
           +     +D     +             + R     +      +D+ ++ +          
Sbjct: 232 LVMADPDDTGNPALGHRRLRQLDAAVPEERRQTVVHRGRGHALDHILVSRELLFRARDIR 291

Query: 275 FSEILYNED--DIKSRGKRLSDHCPISIDYD 303
                  ++  D  +  +  S H P+   ++
Sbjct: 292 VLNEGLADEVRDAGTPAEAGSFHAPVVATFE 322


>gi|194223065|ref|XP_001497667.2| PREDICTED: similar to TRAF and TNF receptor-associated protein,
           partial [Equus caballus]
          Length = 333

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 80/287 (27%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
              ++WNI+ L                      +  Y      D++FLQE+         
Sbjct: 85  FSFITWNIDGLDPNN-----------LQERAQGVCSYLALYSPDVIFLQEV--------- 124

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +   +         +     TAI ++K  V+   Q                R
Sbjct: 125 --IPPYYSYLKKKASSYEIITGNEEGYFTAIMLKKSRVKFKSQEIIPFPDT-----KMMR 177

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G +++++  HL+S                    Q + +   I +      
Sbjct: 178 NLLCVHVSVSGNELFLMTSHLEST----------RGHAKERINQLKMVLKKIQE-APESA 226

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 227 TIIFAGDTNLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYTWDTQMNSNLGIPATCKLRF 286

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A    +I  S   +     +    G+  SDH  +  + D
Sbjct: 287 DRIFFRAAAGDGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 330


>gi|50551027|ref|XP_502987.1| YALI0D18458p [Yarrowia lipolytica]
 gi|49648855|emb|CAG81179.1| YALI0D18458p [Yarrowia lipolytica]
          Length = 454

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 88/308 (28%), Gaps = 49/308 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           ++VR+++ N   L       + K    R  +    L Q       DIV LQE+   +   
Sbjct: 49  KQVRVLTLNCWGL-----KLVSKLRPLRLEAISAQLAQ--DGDSYDIVCLQEVWVESDFD 101

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++                 +           A+  R          + L G   +F R  
Sbjct: 102 QI-----KKACVDHFPYTKYYYSGIIAGPGLAVLSRWPIESAYVHRFGLNGRPSAFFRGD 156

Query: 142 NRR----AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                  A   ++  +  +I +L+ H+ +         T        + QA  +     +
Sbjct: 157 WYVGKSVASATIIHPSNHRIEILNAHMHAPYGPGDANYT-----CHRTSQAWEMARIAKR 211

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------------- 243
             ++    ++ GD N + + L +       +  +    R  +                  
Sbjct: 212 SMDAGNLTIVTGDLNSRPSSLTHQLFENMALLQDAWESRHGEFSGDLSEMTPEQQIEEAG 271

Query: 244 ---RCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                  N    ++       +DY   D +        +  E      D    G  +SDH
Sbjct: 272 VTCNSRLNSWRASRPLSDACRLDYIFFDPSRA------TVREARVAFTDKIEGGCSVSDH 325

Query: 296 CPISIDYD 303
             +S  ++
Sbjct: 326 FGVSAVFE 333


>gi|317502601|ref|ZP_07960722.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           salivae DSM 15606]
 gi|315666282|gb|EFV05828.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           salivae DSM 15606]
          Length = 315

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/338 (11%), Positives = 88/338 (26%), Gaps = 57/338 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKR 49
           M+  ++  L+            ++     N   L + +  SL ++           +  R
Sbjct: 1   MLMHWLYLLLGVFTFV------EL-----NCENLFDTQHDSLKQDMEYLPESYHHWNKSR 49

Query: 50  TTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
             +    + Q               D+V L E+ + + V  +  ++        +    +
Sbjct: 50  YWNKLNHIGQSIIACGKHENKWLLPDLVALCEVENDSVVRDLTKRS-----LLRQARYEY 104

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVL 160
              +S +     +A+           +  +           R  +    + IN   + V 
Sbjct: 105 VMTESPDVRGIDVALLYSPFTFKLLRWNSIRVTPIKGMRPTRDILYAAGQLINDDTLHVF 164

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
            +H  S    +     +  + +    +A    D +     +    VIAGDFN     +  
Sbjct: 165 VVHAPSRMGGELATRDHRMAVAKRLVEA---VDSVRNH-SNNAKIVIAGDFNDYQKDVSI 220

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                       +               K       +D+         F  +   ++  +
Sbjct: 221 QYVMHHDFLDISASAVGNHGAKG---TYKYRGEWGSLDHIFCSDPLIPFFQRCYVADFPF 277

Query: 281 --------------NEDDIKSRGKRLSDHCPISIDYDF 304
                                     SDH P+   ++F
Sbjct: 278 LLTEDEIYGGVQPLRNFHGARYQNGFSDHLPLVSLFNF 315


>gi|300784278|ref|YP_003764569.1| hypothetical protein AMED_2371 [Amycolatopsis mediterranei U32]
 gi|299793792|gb|ADJ44167.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 441

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 86/306 (28%), Gaps = 40/306 (13%)

Query: 12  FLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
            + P  A  A       ++S+N+  L E             TT+    +  Y      DI
Sbjct: 17  VVSPAAAHAADGSGSFSVLSYNVAGLPESISS-APTPRDPATTAIGQRIAPY------DI 69

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           V ++E  +Y+A       + +            +   S  +  +++     +   +  + 
Sbjct: 70  VHVEEDFNYHAKLYAADNHPYRT-----PTSGGAGIGSGLNTLSSLPYDTDDFERVHWTS 124

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
             + + D  +  G       +    G  +   + H  +        +  S          
Sbjct: 125 CQVDSGDCLTPKG--FTFMRVRLAEGMYVDFYNAHTNAGTNDGDEASRASN--------L 174

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L  +I     +    V+ GD N +       D        N     + K         
Sbjct: 175 AQLTAFIKSH-SAGNAVVVMGDTNTRYTRAA--DTIAGFASDNGLTDAWVKLVRGGVAPA 231

Query: 249 KNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                         +   +D  +   +    L    ++        +   GK LSDH PI
Sbjct: 232 PGSPALLCEPVVTNDCEIVDKVLYRSSNLVSLDATFYNNEHAK--FLDDSGKMLSDHDPI 289

Query: 299 SIDYDF 304
           ++ + +
Sbjct: 290 TVRFTW 295


>gi|289167379|ref|YP_003445648.1| exodeoxyribonuclease III [Streptococcus mitis B6]
 gi|288906946|emb|CBJ21780.1| exodeoxyribonuclease III [Streptococcus mitis B6]
          Length = 275

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   + +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDEFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|254823077|ref|ZP_05228078.1| hypothetical protein MintA_24325 [Mycobacterium intracellulare ATCC
           13950]
          Length = 254

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 75/307 (24%), Gaps = 84/307 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI                     D   LR   + LD D++ LQE+      ++ 
Sbjct: 1   MRVATFNILHGRTVGDG-----------VDVARLRDCVRRLDPDVLSLQEVDCDQPRSER 49

Query: 84  FP------------KNTWCIFYSTER---LINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                         ++ +    S       +  + R+        IA+  +      Q  
Sbjct: 50  ADLTAAAAEAMGAVEHRFVAAISGTPGATWMAATGREQPGTAAYGIALLSRYPVASWQVL 109

Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            L      F                 R AV   +      + V + HL      +     
Sbjct: 110 RLPRIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPMGGLTVANTHLSFVPGWNR---- 165

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                       + L   I   +    P ++ GD N     +G                 
Sbjct: 166 ------------RQLLRVIHDLRGFPGPRLLTGDLNMTPKTVGRWSGMRAL--------- 204

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                 +             +D+ +  D       +  S   I              SDH
Sbjct: 205 ------ATAETFPADNPNRQLDHILTDDPRLRGGAVDASPMPI--------------SDH 244

Query: 296 CPISIDY 302
            P+ +D 
Sbjct: 245 RPLVVDL 251


>gi|163854727|ref|YP_001629025.1| putative endonuclease [Bordetella petrii DSM 12804]
 gi|163258455|emb|CAP40754.1| putative endonuclease [Bordetella petrii]
          Length = 262

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 76/270 (28%), Gaps = 59/270 (21%)

Query: 60  YAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           + +   AD++ LQE+     +    +     +   +       +S           + +R
Sbjct: 23  WMQTHSADVLCLQEIKISDADLTDDLRHPPGYTGHFCHAIKKGYSG--------VGMYLR 74

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
               RV        G       A  R      +  + K + V+  +L S    D  +   
Sbjct: 75  NTAERVQA------GLNCEEFDAEGRI-----IRADWKNLSVISAYLPSGSSGDERQQAK 123

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNND 222
                +       L   + + K++   FVI GD+N                    L    
Sbjct: 124 YRFLDVFGPWLDEL---MREHKKTGREFVICGDWNIAHKEIDLKNWKSNQKNSGFLPEER 180

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273
            +   +      +   +  D R        N+           IDY +            
Sbjct: 181 AWLTEVFDKRGFVDVFRRLDERPEQYTWWSNRGQAWAKNVGWRIDYQIATPGLAARARSA 240

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           S             + +R SDH P++IDYD
Sbjct: 241 SI-----------YKDERFSDHAPLTIDYD 259


>gi|160885369|ref|ZP_02066372.1| hypothetical protein BACOVA_03368 [Bacteroides ovatus ATCC 8483]
 gi|298481599|ref|ZP_06999790.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
 gi|156108991|gb|EDO10736.1| hypothetical protein BACOVA_03368 [Bacteroides ovatus ATCC 8483]
 gi|298272140|gb|EFI13710.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
          Length = 341

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 91/343 (26%), Gaps = 59/343 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN----------- 45
           ++K ++ L    +    +  Q+       +  +N+  L +        +           
Sbjct: 1   MKKSLMTLGVLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQW 60

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           +  +  +    + +    L  D       I+ + E+ +Y  +  +  +            
Sbjct: 61  NTMKYKAKLKNMSEILSLLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYR 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
             H + +    +  A     K   +      +     + +    R  +     I  +K+ 
Sbjct: 118 YVHYEGEDQRGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIADEKMH 176

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  H  S           SP+     +Q + +KD +  +++S    VI GD N      
Sbjct: 177 FIVNHWPSR-------AAASPARERAGEQVRAIKDSL-LREDSAAKIVIMGDMNDDPMDK 228

Query: 219 GNNDDFWKTID-----PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLI 271
                           P D    +                    D  V   N        
Sbjct: 229 SMAVALGAKRKPVDAGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRST 288

Query: 272 QESFSEILYNEDDIKSRGKR-----------------LSDHCP 297
            + +   +++ D +  +  +                  SDH P
Sbjct: 289 LKFYKHEIFSRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 331


>gi|157150318|ref|YP_001450810.1| exodeoxyribonuclease III [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157075112|gb|ABV09795.1| exodeoxyribonuclease III [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 275

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q  +  +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLQAENADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILTNLFPDYENTWRSSQEPARKGYAGTMFLYKKELSPIVTFPEIGAP-STMDVEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +               +  ++    L        +   
Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLEDRQVWDAKYAEYLATL--------DEQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERTGFTNLLAKGFTDTFRYLHGDIPNQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|304390659|ref|ZP_07372612.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315654251|ref|ZP_07907159.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333]
 gi|304326415|gb|EFL93660.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315491286|gb|EFU80903.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333]
          Length = 286

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 83/312 (26%), Gaps = 58/312 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R+ +WN+N                   +    +  + +  + D++ +QE+   +     
Sbjct: 1   MRIATWNVN----------------SIRTRVNRVTAFLERENIDVLAMQEIKCRNDQFPT 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    + +F +     N     +   I   +   +    + Q   P         +  
Sbjct: 45  LAFETAGYQVFVNGLNQWNGVAVAARQGISAHLLGTEFYGAIDQ---PYFSVPPKPPQLE 101

Query: 142 NRRAVELLVEINGKKIWVLDI----HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R     +  +    ++V +     HL     L  L++  S     L    + L  ++  
Sbjct: 102 PRVLGVRVAGVECWSLYVPNGREVGHLHYQYKLKWLDSLRSHVIRTLDTDPESLGLYLGD 161

Query: 198 K--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF---------------PKE 240
                         DF    +        +  +   D++                   + 
Sbjct: 162 FNVAPRDEDVWDMADFAGATHVSEPERQVFAKLLDPDTVADAVTLHDDLIEGLPGNLTEI 221

Query: 241 KDSRCNANKNLRN---KIP------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                           +        ID+ +        +            D  +  G++
Sbjct: 222 TRKFAPGWTYWDYQRARWRRNQGMKIDFALATPRLVSRVTGAYI-------DTAERDGEQ 274

Query: 292 LSDHCPISIDYD 303
            SDH P+ +D++
Sbjct: 275 PSDHAPVIVDFE 286


>gi|45360457|ref|NP_988919.1| deoxyribonuclease I-like 3 [Xenopus (Silurana) tropicalis]
 gi|38181666|gb|AAH61621.1| deoxyribonuclease 1-like 3 [Xenopus (Silurana) tropicalis]
          Length = 295

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 81/300 (27%), Gaps = 32/300 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +             +++ S+N+ +  E         S +   +   ++R+       DI 
Sbjct: 4   LLLFWALFVPHTLGLQICSFNVQSFGE---------SKRDKPAVMNIVRKVISRC--DIT 52

Query: 70  FLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            L E+   +      +       +         +     R S  + +     RKK V V 
Sbjct: 53  LLMEIKDSSDTVIRSLMTQLNSQSETRNQFDLTISQRLGRKSYKEQY-GFIYRKKLVSVR 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             +Y    ++     A +R    +  E     +    I  +      + E        L 
Sbjct: 112 -GTYQYEDSQPGDPDAFSREPYVVWFEAPSTDVREFVIVPQH----TTPEAAVREIDELY 166

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                  + W      +   F+  GD N    Y+         +  +   +    +K+  
Sbjct: 167 DVYLDVKQKW------NSENFIFMGDLNAGCAYVPKKAWGNIRLRTHSEFVWLIGDKEDT 220

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
                       I   +        ++  S     +      +  + L  SDH P+ +  
Sbjct: 221 TVKASTKCAYDRI--VMAGDKLLSSVVPGSAQVFDFMAVYGLTEDQALEVSDHFPVEVQL 278


>gi|325090500|gb|EGC43810.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus H88]
          Length = 299

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 75/295 (25%), Gaps = 23/295 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        K    R       L  ++ +     + LQE+        
Sbjct: 8   PIRILTHNIRY-ATSAPFRGEKPWKDRKQRLLNELHYHSCHNPETFICLQEVLHVQLNDI 66

Query: 83  VFPKNT-----------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +   N            W            +   S      A+   +++  V     P +
Sbjct: 67  LSGLNPSTSTSTGATTEWAYIGVGRDDGKQAGEYSPIFYRPAVWELEESKTVWLSETPSV 126

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                +  +  R     + +    +  VL +        D    +   +  L+   A   
Sbjct: 127 P-SRGWDASSIRIVTIGVFKHLVSRKRVLGMSTHL---DDQGSKSRYEAAKLILTMANLY 182

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRCNAN 248
                    ++    +AGDFN + N            + +D    +    +         
Sbjct: 183 LTKNRLASRNINGIFLAGDFNSEENQEAYRVLTAVDSQFVDAQKQVDTALRYGSENTYTG 242

Query: 249 KNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     IDY +        +      E      +    G   SDH  +  D
Sbjct: 243 FGYEDEGPKRIDYVLFGPKHG--VNPAWSVEGYAVVPNKFDDGVLNSDHRAVVAD 295


>gi|328883057|emb|CCA56296.1| Exodeoxyribonuclease III [Streptomyces venezuelae ATCC 10712]
          Length = 276

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 74/275 (26%), Gaps = 58/275 (21%)

Query: 58  RQYAKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            ++     AD V LQE+ +  A   A+V     W   ++           +       ++
Sbjct: 30  VEWLAGTSADAVCLQEVRAEEAQLPAEVRAPEGWFTVHAP----------AAAKGRAGVS 79

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  +      +        D   R        +  ++ G  + V  ++L S       ++
Sbjct: 80  LYTRREPDRVRVGFGSSEFDGSGR-------YVEADLPG--VTVASLYLPSGEAGTERQD 130

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LG 219
                        + L+   T+        V+ GD+N                       
Sbjct: 131 EKYRFMGEFLPYLKELR---TRAAADGREVVVCGDWNIAHREADLKNWRANKKNAGFLPE 187

Query: 220 NNDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYK 268
             +   + +D      +         +         +           IDY +       
Sbjct: 188 EREWLGRVLDEADGAYVDVVRALHPEQEGPYSWWSYRGRAFDNDTGWRIDYQIATPGLAA 247

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ++          +   +  +R SDH P+++ Y+
Sbjct: 248 KAVKGYV-------ERAATHAERWSDHAPVTVVYE 275


>gi|317509131|ref|ZP_07966757.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974]
 gi|316252567|gb|EFV12011.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974]
          Length = 267

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 66/273 (24%), Gaps = 55/273 (20%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  +     A+ + LQE+ +  A A+          +                  + +A+
Sbjct: 23  LLGWLGESPAEYICLQEVRATEAEARAALAPVLADGWKLALAPA------AQKGRSGVAI 76

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +      +    +G  D       R      +E +     +  ++L S       +  
Sbjct: 77  LSRREPDAVR----IGFGDPQFADSGRY-----IEADFGTFTLASLYLPSGEAETERQVE 127

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK---------- 226
                       +   +++          +I GD+N     L   +              
Sbjct: 128 KDQ-------FLKTFGEYLKPLARKRRDVLICGDWNIAHTELDIKNWKGNLKASGFLPHE 180

Query: 227 -------TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270
                    + +D                     +           IDY V ++   K  
Sbjct: 181 RAWLSEVFGEGSDWTDVQRSFHPGEAGPYSWWSFRGQAFDNDSGWRIDYHVANKQLAKRA 240

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          +    R SDH P+ ++Y 
Sbjct: 241 A-------RVVTQRAERYDLRWSDHAPVIVEYT 266


>gi|149925921|ref|ZP_01914184.1| DNA-(apurinic or apyrimidinic site) lyase [Limnobacter sp. MED105]
 gi|149825209|gb|EDM84420.1| DNA-(apurinic or apyrimidinic site) lyase [Limnobacter sp. MED105]
          Length = 260

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 74/271 (27%), Gaps = 61/271 (22%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            +     AD+V +QE+ ++  +A + P++     Y         K  S   ++  +    
Sbjct: 22  DWMNQSQADVVCVQEIKAH--LADLGPEHLQPGAYKGYFQAAEKKGYSGVGLYCKVEPID 79

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                        G  ++   A  R      V    + + V  I+  S    +  +    
Sbjct: 80  VI----------YGLNNAEFDAEGRM-----VTAEFENMIVSSIYFPSGSSSEERQEAKF 124

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNND 222
                         +   + +    P V+ GD+N                          
Sbjct: 125 RFLEHF-------AEIFDEFESKKKPVVLCGDWNIAHQEIDLKNWKGNLKNSGFTPEERA 177

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
                I+    +  +        +       N+           IDY ++       + +
Sbjct: 178 WIGDVINKRGWIDAYRVLYPEETDGCYTWWSNRGQAYAKNVGWRIDYQMVSPALRDSIRE 237

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            S             +G++ SDH P+  DYD
Sbjct: 238 VSV-----------YKGQKFSDHAPLIADYD 257


>gi|326499027|dbj|BAK06004.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 605

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 92/346 (26%), Gaps = 65/346 (18%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77
               ++S+NI  +  +  +  S         T     L +      ADI+ LQE+     
Sbjct: 252 GTFTVLSYNILADAYATSDAYSYCPTWALSWTYRRQNLMREIIGYHADIICLQEVQLNHF 311

Query: 78  -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +  A  F K+ +   Y       ++      D       R +   V +       A  S
Sbjct: 312 EDFFAPEFDKHGYQALYKKRTTEVYAGVPHAIDGCATFFRRDRFSHVKKYEVEFNKAAQS 371

Query: 137 FSR-----AGNRRAVELLVEINGKKIWVLDIHLKS-----------FCFLDSLENTYSPS 180
            +      A  R A+  L++ N   I VL+    +            C  ++  N +   
Sbjct: 372 LTDAIIPPAQKRVALNRLIKDNIALIAVLEAKFGNQGTENPGKRQLLCVANTHVNVHQDL 431

Query: 181 CSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGNN------------------ 221
             +   + Q L   + +   S  +P ++ GDFN       +                   
Sbjct: 432 KDVKLWEVQTLLKGLEKIANSADIPMLVCGDFNSIPGSTPHGLLAIGKVDQLHPDLAIDP 491

Query: 222 ------------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                                          D      R     +     N        +
Sbjct: 492 LGILRPVSKLTHQLPLVSAYSSFARMVGVGYDLEHQRRRMDSGTNEPLFTNCTRDFTGTV 551

Query: 258 DYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           DY     +      + E   E    +D      +  SDH  +  ++
Sbjct: 552 DYIFYTADSLSVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 597


>gi|66808471|ref|XP_637958.1| hypothetical protein DDB_G0285991 [Dictyostelium discoideum AX4]
 gi|60466398|gb|EAL64454.1| hypothetical protein DDB_G0285991 [Dictyostelium discoideum AX4]
          Length = 316

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 84/337 (24%), Gaps = 78/337 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79
            ++R VS+NI   +  +  + W +          L+      L ADI+  QE        
Sbjct: 3   NELRAVSYNIRFDNPSDKQNSWVHRKM-------LVFSNISFLKADIIGFQECLFHQIKD 55

Query: 80  VAKVFPKNTWCIF--------------------------YSTERLINHSKRDSNNDIHTA 113
           + +    N    +                                 N     S    +T 
Sbjct: 56  IKENLNNNYEMSYDFIGVGREYVTKIVLIILLKKKKKKNTYINYDGNEKGEFSPIFYNTK 115

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171
                 + +      P      S++ A  R     L +     K  + L+ HL       
Sbjct: 116 KIELVHSHQFWVSETPYKVGSKSWNTACTRIVTWGLFKQKKTNKSFYFLNTHLDH----- 170

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID-- 229
                      L   +   L        +  +P ++ GDFN         +    TID  
Sbjct: 171 --------QSELARSEGTMLIKSFIATLKPQIPLILVGDFNSNDYQKPIENLISSTIDIN 222

Query: 230 ---------------PNDSLIRFPKEKDSRC-------NANKNLRNKIPIDYFVMDQNAY 267
                                 F  +  + C           +      IDY  ++Q   
Sbjct: 223 FAIKYIQLLEIPIRDDIAFQTLFNTKTIANCKIGPDSTFTGFDCAYSETIDYIFINQQFK 282

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +F     +   +       SDH PI  D  F
Sbjct: 283 AK----TFVVFNNHPSKVTKNSTIASDHFPIVADLKF 315


>gi|256372492|ref|YP_003110316.1| exodeoxyribonuclease III Xth [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009076|gb|ACU54643.1| exodeoxyribonuclease III Xth [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 258

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 81/303 (26%), Gaps = 70/303 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +RL +WN+N                   +   L+  +A+ +  D++ LQE         
Sbjct: 2   TMRLATWNVN----------------SIRARIELVVAWAERVAPDVLLLQE---TKVATD 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP ++            +            +AV  +      +     G   +      
Sbjct: 43  QFPADSLVSL-------GYHVTHWGTGAWNGVAVLTREAPREVR--YGTGFARAPLATEE 93

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            RA+ + +E      W + +++ +   LD     Y             L+  +       
Sbjct: 94  PRALAVRLEAG----WFMSVYVPNGRALDDPHYVYK------LTWLAELRAHLADLVADG 143

Query: 203 VPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
              V+ GDFN   +     D                         L    +         
Sbjct: 144 --VVVGGDFNVAPSDHDVWDPSALEGATHVSLPERRALDALLGLGLTDVYRALHPDDPGF 201

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID  +  ++  + ++         + D    R  R SDH P+ 
Sbjct: 202 TWWDYRQGAFRRGMGMRIDLVLASEDIARNVVAV-------DVDIEARRAPRPSDHAPLV 254

Query: 300 IDY 302
           +D 
Sbjct: 255 VDL 257


>gi|118791581|ref|XP_319828.3| AGAP009079-PA [Anopheles gambiae str. PEST]
 gi|116117671|gb|EAA15055.3| AGAP009079-PA [Anopheles gambiae str. PEST]
          Length = 565

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/323 (10%), Positives = 80/323 (24%), Gaps = 40/323 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWK-------NSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            + R+VS+NI      +                        L  +      AD++ LQE+
Sbjct: 241 GQFRVVSYNILADLYTDSEYSRTVLFGYTAPYALEIDYRKQLFVKEILGYRADLICLQEV 300

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI---------HTAIA---VRKKNVR 122
            +      + P  +        +                         +    + ++   
Sbjct: 301 DTKVFSLDLVPIFSRKNLAGHYQAKGKVAEGLATFYDLNKFELLEKDGVILSEILERYPL 360

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--- 179
           +  +        +  +       + LL   +  +  +L  +   +   D+          
Sbjct: 361 LWDRIRDNQPLVERIANRSTALQLTLLRSKHDPRKHLLVANTHLYFAPDADHVRLLQMGY 420

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------YLGNNDDFWKT 227
           +   + +Q + ++      + + +  V  GDFN                     D     
Sbjct: 421 AMQYVCEQHERIRQQYELSEATDLALVFCGDFNSTPECGIYQLMTQQAVGPDVPDWVSNV 480

Query: 228 IDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYN 281
            +    +      +           N  +  K  IDY            +    SE   +
Sbjct: 481 DEAVKGVSLSQPFQMGSACGCPEYTNYTVGFKACIDYIFFMRGALNVNDVIPMPSEEELS 540

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                      SDH  +  ++++
Sbjct: 541 LYQAIPSLVFPSDHIALVANFEW 563


>gi|322375755|ref|ZP_08050267.1| exodeoxyribonuclease III [Streptococcus sp. C300]
 gi|321279463|gb|EFX56504.1| exodeoxyribonuclease III [Streptococcus sp. C300]
          Length = 275

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHLEILEELFPGYENAWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDTFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIE 274


>gi|300859239|ref|YP_003784222.1| exodeoxyribonuclease III [Corynebacterium pseudotuberculosis FRC41]
 gi|300686693|gb|ADK29615.1| exodeoxyribonuclease III [Corynebacterium pseudotuberculosis FRC41]
 gi|302206930|gb|ADL11272.1| Putative exodeoxyribonuclease III [Corynebacterium
           pseudotuberculosis C231]
 gi|302331494|gb|ADL21688.1| Putative exodeoxyribonuclease III [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277184|gb|ADO27083.1| Putative exodeoxyribonuclease III [Corynebacterium
           pseudotuberculosis I19]
          Length = 255

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 79/297 (26%), Gaps = 62/297 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+V+WN+N                   +    +  + +  + D++ +QE    +     
Sbjct: 1   MRIVNWNVN----------------SARTRVDRMVDFLQRHNVDVLAVQETKCKDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y   + I +       +    +A+  +      Q +       +      +
Sbjct: 41  ------QFPYERFQAIGYQVAHFGLNQWNGVAIISRVGLEDVQKHFPGQPGFNKDPQKEQ 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      + V  +++ +   +      Y           +WL       ++   
Sbjct: 95  AVEARAIGALCGGVRVWSLYVPNGREIADPHYDYK---------LRWLFALQLHAQDVTE 145

Query: 204 PFVIAGDFNRKINYLGNNDDFW---------KTIDPNDSLIRFPKEKDSRCNANKNLRN- 253
           P V  GDFN         D  +               ++L        S           
Sbjct: 146 PTVFLGDFNIAPRDQDVWDMSFFEGKTHVTEPERQAFEALTTSGLHIASPLEGYSYWDYQ 205

Query: 254 --------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    + ID+ +   +          +      D  +  GK  SDH P+ +DY
Sbjct: 206 AGRFLKNQGMLIDFQLATTDL---------TVENSFIDVDERSGKAASDHAPVIVDY 253


>gi|209738408|gb|ACI70073.1| Deoxyribonuclease gamma precursor [Salmo salar]
          Length = 274

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 80/283 (28%), Gaps = 27/283 (9%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           +++ S+NI    + + ++               L +       DI+ + E+   +   V 
Sbjct: 1   MKVASFNIQKFGQHKLLNPNT---------LATLVKIVSRY--DIIVILEVVDKSGTSVK 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K   +           L    +   +      + + + ++  L  ++     +     A 
Sbjct: 50  KFLKELNKANENQKYTLQISPRLGRDKHKEQFMFLYRDDLVDLVNTWQYEDNQAGDVDAF 109

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R    L      K +  +   L         E++      L     +  K W       
Sbjct: 110 AREPYILRF----KCLHSVLEDLVLIPVHTKPEDSVKELDELYDVFLEVTKKW------K 159

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               +I GDFN   +YL         I  + +     K+         N      I   +
Sbjct: 160 TDNVMILGDFNADGSYLSKKGMKAIRIRSDKNFHWLIKDAVDTTANTGNDNTYDRI--VI 217

Query: 262 MDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302
              +    ++  S     +            ++SDH P+ ++ 
Sbjct: 218 YGDDMLDAIVPNSAKPFNFQIAYGLSEEDALKVSDHYPVEVEL 260


>gi|147919368|ref|YP_686896.1| endonuclease/exonuclease [uncultured methanogenic archaeon RC-I]
 gi|110622292|emb|CAJ37570.1| predicted endonuclease/exonuclease [uncultured methanogenic
           archaeon RC-I]
          Length = 294

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 82/300 (27%), Gaps = 31/300 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + ++RL+SWNI       G + +     R   +   + +       D++ LQE       
Sbjct: 6   SDRIRLLSWNICFGGIGAGRTGYDPITSR--ENLRGIVRAILGKSPDVIVLQEYRDAEE- 62

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                K        T    N     +   I     +          S+ +   +      
Sbjct: 63  TGGVIKAGLREAGYTCHSSNPGLDKNGILIALGRNLTDMYAVSPAASFKV-DTRRLDEIY 121

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY-SPSCSLLSQQAQWLKDWITQKK 199
             R A  L ++  G    +L IH+                S          L ++  +K 
Sbjct: 122 RYRWA-NLGLKSQGMSFELLGIHIPDVRPGRKGGPETFVRSIGHKQLIWDALIEYAREKL 180

Query: 200 ESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           ++    +IAGDFN  +N                            +      R    +  
Sbjct: 181 KTGSEAIIAGDFNTGLNAEDRSHNTDSYYLSDRMAYLKRLKNSHGEGLADAWRKFHPEPG 240

Query: 244 RCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +    L N+   +DY  +     K L    +S               LSDH  +  D 
Sbjct: 241 PEDYTWFLGNRGFRLDYVFLTPGLGKRLSGVEYSHEERVS--------GLSDHSMVLADI 292


>gi|303312829|ref|XP_003066426.1| glucose-repressible alcohol dehydrogenase, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240106088|gb|EER24281.1| glucose-repressible alcohol dehydrogenase, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320036731|gb|EFW18669.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Coccidioides posadasii str. Silveira]
          Length = 758

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/360 (10%), Positives = 87/360 (24%), Gaps = 81/360 (22%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K   +++N   +  +  +      +          LL    +  DADIV LQE+   + 
Sbjct: 381 NKFTALTYNTLCDRYATNQQYGYAPSRALAWEFRRDLLLNEIRGHDADIVCLQEIDQGSY 440

Query: 80  VAKVFPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRKK---NVRVL 124
                 +  +  +                         +       I + K      +  
Sbjct: 441 HGFFREQLAYNDYKGVYWPKGRAQGMPEEEAKLVDGCATFFKGSKYILLEKNMIHFGQTA 500

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
            +     G  D ++R   +  + ++V     + G+++ V++       +  + ++     
Sbjct: 501 VRRPDAKGQDDIYNRLWQKDNIAVIVFLENRLTGERMIVVN---AHIYWDPAYKDVKLIQ 557

Query: 181 CSLLSQQAQWLKD------------------------------------WITQKKESLVP 204
            +++ ++   L +                                     +     S +P
Sbjct: 558 VAIMMEEVTQLAEKYVKIPPCTDKTAFRFSEPEDGKESQGTSTPVEPAPSVEYSSASQIP 617

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC---- 245
            ++ GDFN                           +  +        F  +         
Sbjct: 618 ILVCGDFNSCPGSAVYNLLAHGRMAEEHPDLEKRLYGNLSRMGMSHPFTLKSAYSTIGEL 677

Query: 246 -NANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              N        IDY     N      +     +               SDH  +  ++ 
Sbjct: 678 SFTNYTPGFTDVIDYIWYSSNTLQVTALLGEVDKEYLKRVPGFPNYHFPSDHLALMAEFS 737


>gi|190344380|gb|EDK36047.2| hypothetical protein PGUG_00145 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 497

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 87/311 (27%), Gaps = 47/311 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             R+ S N+            ++ +KR       + ++   L+  +V LQE+  +     
Sbjct: 196 TFRIYSHNVRNGGRDILDPGEESWLKRYRKITASI-KFNSQLN-TVVALQEVYKFQLDDI 253

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD------- 135
           +   N +      E       R   + +   + +  K        Y  +   +       
Sbjct: 254 MRDLNRYSPPEEPEWEAYGVGRIDGDQLGEFVPILFKTSEWEMVFYDSIWLNEDNPRMAL 313

Query: 136 -SFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             +     R    + ++ ++G  I V + HL         E +   S  ++  +   +  
Sbjct: 314 EGWDAKYLRIVSYVTLKHVSGNYINVFNTHL-----DHMGELSKQGSAQIILDKMNSINQ 368

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNAN 248
           W         P  + GD N + N         +  +       F      K   +     
Sbjct: 369 W---------PSFLCGDLNTEPNEKAYQIITEQFRNSAKLTTAFNKYGHSKSTVTGFEGE 419

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----------------GKRL 292
             L     IDY     +    L +    + L      +                  G  +
Sbjct: 420 VLLNGGQNIDYIFA-PSYTAKLGETVLCDKLTTSPPSERYLDLRLKSFGMLHSKFNGLYM 478

Query: 293 SDHCPISIDYD 303
           SDH PI  D+ 
Sbjct: 479 SDHRPIVADFT 489


>gi|293371500|ref|ZP_06617920.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292633537|gb|EFF52100.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 297

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 79/337 (23%), Gaps = 75/337 (22%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ-----------------------------KVRLVSWNI 31
           M +  +  L+ F+    AS  +                              +R+ ++N+
Sbjct: 1   MKKIVIYTLITFIFSVFASSCEDNKDNSLYYPDFTWDTGDGEEDEDPVTETSMRVATYNL 60

Query: 32  NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYNAVAKVFPKN 87
                         +    T+    + Q  K+ D +I   +E      SY          
Sbjct: 61  Q-----------VETGTGWTNRRERVAQLIKDYDFEICGFEEASWEQRSYLGTQLASDYQ 109

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
                  T    N +   S      +        R      P + +         R  V 
Sbjct: 110 ILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDETNFKRFCVW 169

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
              + +  +              ++                Q L D ++ K +   P   
Sbjct: 170 GKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVSDKAKDNTPAFC 218

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
            GDFN   +         +          + +              K  ID+  +     
Sbjct: 219 TGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTRIDFIFV----- 270

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302
                +  + +             LSDH P  I ++ 
Sbjct: 271 -----KHATVLSTRTIVSS-----LSDHYPMVIVVEI 297


>gi|224542024|ref|ZP_03682563.1| hypothetical protein CATMIT_01197 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525081|gb|EEF94186.1| hypothetical protein CATMIT_01197 [Catenibacterium mitsuokai DSM
           15897]
          Length = 267

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 84/299 (28%), Gaps = 56/299 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           ++L++ N ++LSE +  +               +  +  N D D++ LQE+         
Sbjct: 1   MKLMTLNTHSLSESDEKN-----------KLQTIANFILNHDVDVICLQEVNQSMTAKSV 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQS 127
              S      +  ++ + +  S      ++       +        +A+  K   V  ++
Sbjct: 50  STDSSYVGRDIIKEDNYALGLSRLLGDQYNWNYIPVKVGYDKFDEGVAIFSKYPIVNSEN 109

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             L    D       R ++ + +       WV         + D  E   +         
Sbjct: 110 TLLTQTNDYSFWKK-RNSLGVELVKENTHFWVYT--AHLGWWKDEEEPFINQWHK----- 161

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                  +       VP  +AGDFN        +    K     D+       +      
Sbjct: 162 -------LKTIATKEVPVYLAGDFNAPDIIPNQSYTTIKEDGWFDTRDLADDVQGRFTAQ 214

Query: 248 NKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            K            IDY   ++               ++     +    +SDH  + ++
Sbjct: 215 GKIDGWDEAVDGMRIDYIWCNKK---------EHVKSHHVIFDGTHEDVVSDHFGLFME 264


>gi|255727857|ref|XP_002548854.1| hypothetical protein CTRG_03151 [Candida tropicalis MYA-3404]
 gi|240133170|gb|EER32726.1| hypothetical protein CTRG_03151 [Candida tropicalis MYA-3404]
          Length = 400

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/334 (10%), Positives = 92/334 (27%), Gaps = 43/334 (12%)

Query: 13  LVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            V           ++S+N+     +     S+ +  +  T   + L+ +    L  DI+ 
Sbjct: 67  WVTINTERNNPFSIMSFNLLSQHYTWHL-TSVEQKYLDWTNYRFPLINKTISQLQCDIMC 125

Query: 71  LQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQQ 126
            QEM         +  FP   +   Y+ + L        ++    +I +   +   + ++
Sbjct: 126 FQEMEFSVYKQFWSHNFPNPNFKSHYAKKTLPPCWGSSEDHIDGVSIFINTLRFDVLDKK 185

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD-----IHLKSFCFLDSLENTYSPSC 181
                    +        A      +    + ++      +  K     ++         
Sbjct: 186 EIHFANHILNHKEEFQLTADLKERMLPRNTVALIVKLFDKVANKIVYVANTHLYWSPEYN 245

Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
            + + Q + L + +     ++     ++AGD N  +N           ++ +D       
Sbjct: 246 DIKTLQMKILLNELNGFIQEDEDAYVLLAGDLNSTLNSSVIRILSSSGVNVSDCFSFKNY 305

Query: 240 EKDSRC-----------------------------NANKNLRNKIPIDYFVMDQNAYKFL 270
              S                                 +        +D+    +  ++  
Sbjct: 306 NYGSNNCLVDKNGDIKNPFNFQSVYQPLISSNSLQFTSHTTGYSGILDHIFASKTKFQVN 365

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +  Y   +     +  SDH PI+ +  +
Sbjct: 366 RLLGGVDKSYIAKNGFPDAQFPSDHIPIAAEISY 399


>gi|56459690|ref|YP_154971.1| hypothetical protein IL0581 [Idiomarina loihiensis L2TR]
 gi|56178700|gb|AAV81422.1| Uncharacterized conserved secreted protein [Idiomarina loihiensis
           L2TR]
          Length = 402

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/396 (11%), Positives = 104/396 (26%), Gaps = 97/396 (24%)

Query: 4   KYVLALVFFLVPCTAS----------VAQKVRLVSWNI-----NTLSEQEGVSLWKNSVK 48
           +++L L F ++    S            + +R+ ++N+     N LS+ E   L K+ V 
Sbjct: 5   RFLLILTFVVLMIPTSFNAFAGSGKGEPETIRVATFNVSMDASNYLSDSELPQLDKSPVP 64

Query: 49  ----RTTSDYTLLRQYAKNLDADIVFLQE-----------MGSYNAVAKVFPKNTWCIFY 93
               +       + +  + +  DIV L E           +     ++          + 
Sbjct: 65  EVLQQDHEQIRGIAEILQRVRPDIVLLNEFDYVDKEIGVNVFQEKYLSIPQNGQKAIEYP 124

Query: 94  STERLINHSKRDSNND---------------------IHTAIAVRKKNVRVLQQSYPLLG 132
            T     ++   S  D                         + +  K   +  ++     
Sbjct: 125 YTYIAPVNTGVASPFDLNRDGTAQGTGIDAWGFGWYPGQYGMVILSKYPLLTDKARTFQH 184

Query: 133 --------------------AKDSFSRAGNRRAVE---------LLVEINGKKIWVLDIH 163
                                 D    +    A           + V++  K I +L  H
Sbjct: 185 FLWKDMPGRHIPYVMNEQEQPTDEQWYSDEIMAQYPLSSKSHWDVPVQVGDKVIHLLAAH 244

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWL----------KDWITQKKESLVPFVIAGDFNR 213
                F     +    +   +   A +L           + +     +   F++ GD N 
Sbjct: 245 PVPPAFDGPENSNGMRNYDEIRLLADYLTPGSDNYLYDDNGVRGGLGADESFIVMGDMNA 304

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNKIPIDYFVMDQNA 266
           +    G +    + +         P+ +    ++             +  +DY +   + 
Sbjct: 305 EAGSGGIDGAIEQLLQHPRVNDVKPQSRGGEQHSPDKRGSQYHTAAWRKRVDYVLPSNDL 364

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   +         +  +    SDH  + +D 
Sbjct: 365 VVKDAGVFWPVGDEAGSRLMQKRSASSDHRMVWLDI 400


>gi|228476525|ref|ZP_04061215.1| metal-dependent hydrolase [Streptococcus salivarius SK126]
 gi|228251946|gb|EEK10992.1| metal-dependent hydrolase [Streptococcus salivarius SK126]
          Length = 303

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 79/284 (27%), Gaps = 54/284 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +     +  L++       DI+  QE+      + V     +    S             
Sbjct: 46  EDAEGKFQTLKEQILKAQYDIICFQEVNQEIETSVVDTDAYYHALPSATPIHQDHFVRLL 105

Query: 96  ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 + ++  +AV  +      +   L+   D  +    RR 
Sbjct: 106 VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASE--ILVSDVDDPTDYHTRRV 163

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                 ++G+++ V  +HL  +      E                      + K    P 
Sbjct: 164 AVAETTVDGREVAVASVHLSWWDKGFQEEWARIE----------------ERFKAIGKPL 207

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260
           ++AGDFN      G+      +++  DS     +   S       +  K     + IDY 
Sbjct: 208 ILAGDFNNPAGREGHQAILASSLNLQDSFEVAKETTGSYTVGPGIDGWKGNEEPLRIDYV 267

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              Q+         ++    +     +    +SDH  +  +  F
Sbjct: 268 FASQD---------WTVERLSVIFDGNNQPLVSDHYGLEAELTF 302


>gi|260219779|emb|CBA26652.1| hypothetical protein Csp_H39670 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 263

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/274 (11%), Positives = 74/274 (27%), Gaps = 58/274 (21%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  +      D + +QE+ +      +  +  +                +    ++ + V
Sbjct: 20  LEAWLTQAQPDCICVQEVKAQA--PDIAGRFEYFGELQGH------FHFAEKKGYSGVGV 71

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K+     +        D+  R      VEL  +   +K  ++  +  S    +  +  
Sbjct: 72  YTKHAPSDVRIGYGSAEFDAEGRY-----VELRFDTPSRKFSIISAYFPSGSSGEERQAA 126

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                +      Q L+             V+ GD N                        
Sbjct: 127 KFRFLAEFYPHLQQLRA--------ERELVLCGDLNIAHQEVDLKNWKGNKKNSGFLPEE 178

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNAYKFL 270
                K +     +  + + + +  +       N+           +DY           
Sbjct: 179 RAWMSKALSEGGLVDVYRQLEPTATDDCYTWWSNRGQAYAKNVGWRLDY----------- 227

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              + +     ++    + ++ SDH PI++ YDF
Sbjct: 228 HLATPALAATAKEVAIYKAEKFSDHAPITVSYDF 261


>gi|153001903|ref|YP_001367584.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS185]
 gi|151366521|gb|ABS09521.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS185]
          Length = 402

 Score = 75.0 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 90/382 (23%), Gaps = 104/382 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +++ S N+    E            S  +       L ++  +   DIV  QE+ S   +
Sbjct: 18  IKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLTHRQPDIVGFQEVFSPEPL 77

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPLLGAKDSF 137
            ++         ++                  A+A R   V    V   +  +     S 
Sbjct: 78  KRIASVQG-LAHFAVVDEPTLISDYIYRSPVVALASRYPIVEISSVEPGARLVAAMGLSS 136

Query: 138 SRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENT-------------------- 176
             A +R+ +   +E+    K     +H KS     +LE                      
Sbjct: 137 EFAFSRKVLRATIEVPHIGKCDFYVVHFKSKRAGLALEPKLIEPKLSEHQRFENQPLGFD 196

Query: 177 -----------------------YSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFN 212
                                     S      +A  L    + +++ S  P ++ GDFN
Sbjct: 197 NSAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQASKYPVIVMGDFN 256

Query: 213 RKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----------- 246
             +               +           +        F + +                
Sbjct: 257 DSLTMGALDALTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLFIN 316

Query: 247 --------------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                                +        +DY ++         +     + Y   D  
Sbjct: 317 ANQQGSLTGNTAFHREHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRH 376

Query: 287 ------SRGKRLSDHCPISIDY 302
                  R    +DH P+ ++ 
Sbjct: 377 LVRPEYERDAYSTDHAPVIVEL 398


>gi|238855799|ref|ZP_04646091.1| exodeoxyribonuclease III [Lactobacillus jensenii 269-3]
 gi|260665239|ref|ZP_05866088.1| exodeoxyribonuclease III [Lactobacillus jensenii SJ-7A-US]
 gi|282933520|ref|ZP_06338892.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1]
 gi|238831575|gb|EEQ23920.1| exodeoxyribonuclease III [Lactobacillus jensenii 269-3]
 gi|260560976|gb|EEX26951.1| exodeoxyribonuclease III [Lactobacillus jensenii SJ-7A-US]
 gi|281302366|gb|EFA94596.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1]
          Length = 275

 Score = 74.6 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 83/303 (27%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++L+        +    R       +       + DI+ +QE            
Sbjct: 3   LISWNIDSLNAALTSDSARAQKTRH------VLTQIAEKEPDILAIQETKLRATGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                  +     +  S  +     +       K     + SYP +GA D+    G    
Sbjct: 57  AEILQEMFPDYDYVWRSSEEPARKGYAGTMYLYKKSLKPEVSYPKIGAPDTMDFEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +   + +V  ++  +        +          +  Q L        +   P 
Sbjct: 114 ---IITLEFPEYFVTQVYTPNAGGELKRLSDRQGWDKKYIEYLQEL--------DVQKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +        F K   +       
Sbjct: 163 LASGDYNVAHEEIDLKHPENNHHSAGFTDEERADFTELLAAGFTDSFRKIHGNIPEVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY++        + +           ++   G+R  DHCPI +
Sbjct: 223 WAQRIRTAKANNSGWRIDYWLTSNRIADKIKKS----------EMMDTGERA-DHCPIVL 271

Query: 301 DYD 303
           + +
Sbjct: 272 EIE 274


>gi|306834074|ref|ZP_07467194.1| exodeoxyribonuclease III [Streptococcus bovis ATCC 700338]
 gi|304423647|gb|EFM26793.1| exodeoxyribonuclease III [Streptococcus bovis ATCC 700338]
          Length = 275

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAVMSR------AVIDTLVTENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++    +   S  +     +       K+      SYP +GA D+    G  
Sbjct: 55  KHLQILQDYFPEYEVSWRSSVEPARKGYAGTMFLYKSSLTPSISYPEIGAPDTMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   K +V  ++  +                  +     L            
Sbjct: 114 -----IITLEFDKFFVTQVYTPNAGDGLKRLAERQIWDEKYADYLTELDQV--------K 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        +  
Sbjct: 161 PVLATGDYNVAHKEIDLAHPSSNRRSPGFTDEERAGFTNLLAKGFTDTFRYIHGDIPDVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 SWWAQRSKTSKINNSGWRIDYWLTSSRIADKITKSEMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|302524148|ref|ZP_07276490.1| exodeoxyribonuclease III [Streptomyces sp. AA4]
 gi|302433043|gb|EFL04859.1| exodeoxyribonuclease III [Streptomyces sp. AA4]
          Length = 282

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 71/272 (26%), Gaps = 55/272 (20%)

Query: 58  RQYAKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            ++    +AD+V  QE+ +  A   A V     W   ++           S       ++
Sbjct: 35  VEWLAATEADVVACQEVRAEAAQLPASVVAPEGWFAAHAP----------SVVKGRNGVS 84

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  +      ++       +   R        L + + G  + V  ++L S       ++
Sbjct: 85  LYSRVEPDEVRTGFGEPEFEDSGR-------YLEMHLPG--VVVASLYLPSGDVGTERQD 135

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---- 231
                          L+    +        V+ GD+N   + +   +      +      
Sbjct: 136 EKERFMDAFLPYLVELRA---KSAAEGREVVVVGDWNIAYDTVDLKNWRGNQKNSGFLPE 192

Query: 232 -----------DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLI 271
                             +              +           ID  +      + + 
Sbjct: 193 EREWMGRVYEAGYTDVQRRLDPEGPGPYTWWSYRGKAFDNDSGWRIDCQLATPGLAEKVK 252

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +  +S  +R SDH P++  YD
Sbjct: 253 SV-------VVERAESYDQRWSDHAPVTATYD 277


>gi|332669652|ref|YP_004452660.1| exodeoxyribonuclease III Xth [Cellulomonas fimi ATCC 484]
 gi|332338690|gb|AEE45273.1| exodeoxyribonuclease III Xth [Cellulomonas fimi ATCC 484]
          Length = 277

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 76/308 (24%), Gaps = 67/308 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + + N+N +                      + ++      D++ LQE+         
Sbjct: 8   LTIATVNVNGIRAAYKRG---------------MGEWLAVRKPDVLLLQEVRASDEILAD 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRA 140
            +  ++ W + +            S       +A+  +      +         D+    
Sbjct: 53  HLTAEDGWHLAH----------EASETKGRAGVAIASRLPMDAVRIGLRTGVTGDTGRWV 102

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               AV        + + V+  ++ S            PS          +   +    +
Sbjct: 103 EADLAVPSHDGAPARTVTVVSTYIHSGTLGT-------PSMDEKYAFLDHVTARLGDLSQ 155

Query: 201 SLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR 244
           +    V+AGD N         +                   +  D         +     
Sbjct: 156 AGGYAVVAGDLNIAHREADIKNWKGNLRSAGFLPQERAYLDRWFDDLSWRDLGRELGGEG 215

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY +   +     +           D   +  +R SDH
Sbjct: 216 PGPFTWWSWRGQAFDNDSGWRIDYQLATPDLADAAVAA-------TVDRAPTYAERFSDH 268

Query: 296 CPISIDYD 303
            P+ ++YD
Sbjct: 269 APLVVEYD 276


>gi|114329634|gb|ABI58270.1| exodeoxyribonuclease [Streptomyces coelicolor A3(2)]
          Length = 267

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 79/308 (25%), Gaps = 71/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + S N+N L                 +      ++     AD++ LQE+         
Sbjct: 2   LTVTSVNVNGL---------------LAAAKKGFVEWLAGTSADVLCLQEVR-------- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             +      ++      H             +++  +      +        D+  R   
Sbjct: 39  -AEPHQLPDHAGAPEGWHVTHAPAAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGR--- 94

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                +  ++ G  + V  ++L S       ++             + L++    +    
Sbjct: 95  ----YVEADLPG--VTVASLYLPSGEVGTERQDEKVRFMGEFLAYLKELRERAAAQ---G 145

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDP--NDSLIRFPKEKDSR 244
              V+ GD+N                         +   + +DP     +          
Sbjct: 146 REVVVCGDWNIAHREADLKNWRANKKNSGFLPEEREWLGRVLDPAEGGYVDVVRALHPDV 205

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY V         ++          +   +  +R SDH
Sbjct: 206 EGPYSWWSYRGRAFGNDAGWRIDYHVSTPGLAAKAVKGYV-------ERAATHAERWSDH 258

Query: 296 CPISIDYD 303
            P+++ Y+
Sbjct: 259 APVTVVYN 266


>gi|223944849|gb|ACN26508.1| unknown [Zea mays]
          Length = 282

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 83/282 (29%), Gaps = 25/282 (8%)

Query: 27  VSWNI---NTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+NI           + L       R  S   L+ +  ++ D D+V LQE+  +  +A 
Sbjct: 1   MSYNILADYNARNHPDLYLDAPWDAMRWDSRRRLIIREIRHWDPDVVCLQEVDRFQDIAA 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +   +         +R  +     AI  + K + ++++               N
Sbjct: 61  GMKSRGYEGIFQ--------RRTGDTRDGCAIFWKSKQLHLVEEDSIDFSE----FNLRN 108

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             A   + E+NG   +VL      F               +     ++   W  ++  + 
Sbjct: 109 NVAQICVFELNGTHKFVLGNIHVLFNPKRGDVKLGQTYPDISHSLLKY--QWTDEEVRNA 166

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
             +         +    +     K    N  L   P         + + +    +DY   
Sbjct: 167 TGYSNVMVAEHPLKLSSSY-AMLKGNSNNRGLHGEPLAT------SYHRKFLGTVDYLWH 219

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   + ++    +          +  SDH PI  ++ F
Sbjct: 220 THGIECSRVLDTLPISVLKRTRGLPTREIGSDHLPIVAEFAF 261


>gi|198422742|ref|XP_002124404.1| PREDICTED: similar to endonuclease/exonuclease/phosphatase family
           domain containing 1 [Ciona intestinalis]
          Length = 560

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 93/294 (31%), Gaps = 38/294 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+ +WN+   S             R      ++          I+ +QE+   NA+ ++
Sbjct: 261 VRVATWNLQHCSCD---------KTRNPGVREVVCMTILENGVKILGVQELDDENALNEI 311

Query: 84  FPKNTWCIFYSTERLINHS-----------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             +       + +R  + S            +      ++     +  V     +   L 
Sbjct: 312 VNELNNPTLPNIQRFKSTSTWKCSVLPTAEGKLFQGTEYSGFLWEESIVDYNNSA---LV 368

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            K    +   R+ +    ++    + ++++H++     D +   +  +   L +    + 
Sbjct: 369 KKSVGGKKFARQPMLGFFKVGKVDLVLVNLHMEDDASDDLM--RFGENVKDLPEILDAVD 426

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             + ++++     VI GDF+   +        ++ +         P    +  N      
Sbjct: 427 HHLDEEEK---VVVILGDFSVGPDETE-----FEALGAKSYKPVIPCNVPTNINRKDMKG 478

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----RLSDHCPISIDY 302
           ++   D   ++Q+A      E         +     G      +SDHCP  +  
Sbjct: 479 SRCR-DNLWLNQSATALYTSEWKVVRNGLTNPWIPDGWSWGGVVSDHCPAWVQL 531


>gi|139474328|ref|YP_001129044.1| exodeoxyribonuclease [Streptococcus pyogenes str. Manfredo]
 gi|134272575|emb|CAM30841.1| exodeoxyribonuclease [Streptococcus pyogenes str. Manfredo]
          Length = 275

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 83/306 (27%), Gaps = 56/306 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++     +  S  +     +       KN      ++P +GA  +    G  
Sbjct: 55  KHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +V  ++  +        +         +     L        ++  
Sbjct: 114 -----IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWDHKYADYLTEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        +  
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMISSGERQ-----------DHTPI 269

Query: 299 SIDYDF 304
            +D DF
Sbjct: 270 LLDIDF 275


>gi|194384902|dbj|BAG60857.1| unnamed protein product [Homo sapiens]
          Length = 392

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WNI+ L                +     +  Y      D++FLQE+         
Sbjct: 144 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 183

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +                   TAI ++K  V++  Q      +         R
Sbjct: 184 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 236

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S               +    Q + +   + +      
Sbjct: 237 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 285

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 286 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 345

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 346 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389


>gi|119575862|gb|EAW55458.1| TRAF and TNF receptor associated protein, isoform CRA_a [Homo
           sapiens]
          Length = 392

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WNI+ L                +     +  Y      D++FLQE+         
Sbjct: 144 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 183

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +                   TAI ++K  V++  Q      +         R
Sbjct: 184 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 236

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S               +    Q + +   + +      
Sbjct: 237 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 285

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 286 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 345

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 346 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389


>gi|7578789|gb|AAF64144.1|AF223469_1 AD022 protein [Homo sapiens]
          Length = 362

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WNI+ L                +     +  Y      D++FLQE+         
Sbjct: 114 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 153

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +                   TAI ++K  V++  Q      +         R
Sbjct: 154 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 206

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S               +    Q + +   + +      
Sbjct: 207 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 255

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 256 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 315

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 316 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 359


>gi|31652284|emb|CAD92510.1| TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022,
           MGC9099) [Homo sapiens]
 gi|119575863|gb|EAW55459.1| TRAF and TNF receptor associated protein, isoform CRA_b [Homo
           sapiens]
          Length = 304

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WNI+ L                +     +  Y      D++FLQE+         
Sbjct: 56  FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 95

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +                   TAI ++K  V++  Q      +         R
Sbjct: 96  --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 148

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S               +    Q + +   + +      
Sbjct: 149 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 197

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 198 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 257

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 258 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 301


>gi|23510348|ref|NP_057698.2| tyrosyl-DNA phosphodiesterase 2 [Homo sapiens]
 gi|67462008|sp|O95551|TYDP2_HUMAN RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=ETS1-associated protein 2; AltName:
           Full=ETS1-associated protein II; Short=EAPII; AltName:
           Full=TRAF and TNF receptor-associated protein
 gi|11493669|gb|AAG35600.1|AF201687_1 ETS1-associated protein 2 [Homo sapiens]
 gi|4210353|emb|CAA21141.1| TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022,
           MGC9099) [Homo sapiens]
 gi|8247254|emb|CAB92966.1| TRAF and TNF receptor associated protein [Homo sapiens]
 gi|17028465|gb|AAH17553.1| TRAF and TNF receptor associated protein [Homo sapiens]
 gi|47060297|gb|AAT09764.1| TRAF and TNF receptor associated protein [Homo sapiens]
 gi|83759169|gb|AAI10376.1| TRAF and TNF receptor associated protein [Homo sapiens]
 gi|167773417|gb|ABZ92143.1| TRAF and TNF receptor associated protein [synthetic construct]
 gi|306921401|dbj|BAJ17780.1| TRAF and TNF receptor associated protein [synthetic construct]
          Length = 362

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WNI+ L                +     +  Y      D++FLQE+         
Sbjct: 114 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 153

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +                   TAI ++K  V++  Q      +         R
Sbjct: 154 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 206

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S               +    Q + +   + +      
Sbjct: 207 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 255

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 256 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 315

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 316 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 359


>gi|7023883|dbj|BAA92119.1| unnamed protein product [Homo sapiens]
          Length = 362

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WNI+ L                +     +  Y      D++FLQE+         
Sbjct: 114 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 153

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +                   TAI ++K  V++  Q      +         R
Sbjct: 154 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 206

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S               +    Q + +   + +      
Sbjct: 207 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 255

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 256 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 315

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 316 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 359


>gi|114330706|ref|YP_746928.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91]
 gi|114307720|gb|ABI58963.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91]
          Length = 257

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N L                      L  +    +AD++ +QE+ +       
Sbjct: 1   MRIITLNLNGLRSAASKG---------------LFDWLPQQEADVICVQELKAQQ----- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N       T    +     +    ++ + +  ++          +   D+  R    
Sbjct: 41  ---NDINGVMRTPDGYSGYFHCAVKKGYSGVGIYTRHAPDQIVEGTGIAEIDAEGRF--- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + ++   + V+ I+L S    +  +              Q L +          
Sbjct: 95  ------LRVDFGNLTVISIYLPSGSSGEHRQAAKFFFMEHFFPLLQSLAE-------GGR 141

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD+N                    L     +  T+     L+   +  +   +  
Sbjct: 142 EVLLCGDWNIAHKEIDLKNWRSNQKNSGFLPEERAWLSTVFDELKLVDVFRTINPEPDQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +            S             + +R SDH P+ 
Sbjct: 202 TWWSNRGQAWAKNVGWRIDYQIATPGLASTATGASI-----------YKTERFSDHAPLL 250

Query: 300 IDYDF 304
           IDYDF
Sbjct: 251 IDYDF 255


>gi|325955052|ref|YP_004238712.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
 gi|323437670|gb|ADX68134.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
          Length = 343

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 81/302 (26%), Gaps = 78/302 (25%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           ++    + ++S+N + + +                      Q+     ADI+  QE    
Sbjct: 100 STAKPNLSVMSYNAHFIRDDGTD------------------QFIAKNLADIMMFQEAYEK 141

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           N  +      ++   +                    IA   K   +  +        +  
Sbjct: 142 NFKSIEKELQSYYSEHYGL-----------------IAFFSKYPIIETKQINFPTQNNKG 184

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-------------- 183
           +      A    ++     I +++I++++     +L  +   + +               
Sbjct: 185 T------AAYADIDTGKDTIRLVNIYMETMGVDKNLVKSTIEAENSAQVEEKTKKIENKL 238

Query: 184 ---LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
              +    + LK+ +    +S  P ++  D N                        F + 
Sbjct: 239 IAGMLMHEKQLKEIMPYITKSPYPVLVGCDLNATPASYEYQQL------NAYLYDSFLQV 292

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                      R  I IDY    +               +   D K   K+ SDH P+ +
Sbjct: 293 GKGNATTFHGFRFPIRIDYLFHSKE--------------FIPIDGKIIRKKFSDHYPVIV 338

Query: 301 DY 302
            Y
Sbjct: 339 QY 340


>gi|85717081|ref|ZP_01048042.1| exodeoxyribonuclease III [Nitrobacter sp. Nb-311A]
 gi|85696119|gb|EAQ34016.1| exodeoxyribonuclease III [Nitrobacter sp. Nb-311A]
          Length = 257

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 86/304 (28%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +++ ++NI+ ++                     L ++ K+   D+V LQ++     +   
Sbjct: 1   MKIATFNIDNVNT----------------RLPNLLEWLKHSKPDVVCLQDLKCEERDFPR 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +   + +++ +N            AI  R+ +  V ++  P   +        
Sbjct: 45  AALREAGYSAVWESQKSLN----------GVAILSRRSHPIVTRRRLPGDPSD------- 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R A  +   + G  + +  ++L         E  Y             L     + +  
Sbjct: 88  -REARYIEAAVGG--LLIACLYLPKGNPQPGPEFDYK------MSWLSRLTKHAARLQGQ 138

Query: 202 LVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIRFPKEKDSRC 245
             P ++ G++N     L                     F   +    +       +  R 
Sbjct: 139 DHPALLVGNYNVAPTDLDMCSTESWTNDARVQQTQRKAFASLLANGWTDALRDVYRHERV 198

Query: 246 NANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +D+F++ +     LI+          D      K  SDH P 
Sbjct: 199 YTFWTYGRDRYEKDHAFRLDHFLLSKAVASRLIKAGV-------DGDGRSEKNASDHAPA 251

Query: 299 SIDY 302
            I  
Sbjct: 252 WIKL 255


>gi|73539900|ref|YP_294420.1| AP endonuclease [Ralstonia eutropha JMP134]
 gi|72117313|gb|AAZ59576.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ralstonia
           eutropha JMP134]
          Length = 258

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           +R++S N+N +        +               ++    DAD+V +QE+ +  A    
Sbjct: 2   LRIISANLNGIRSASKKGFF---------------EWMGKQDADMVCVQELKAQAADMTE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + +  ++       +S           +  R K  RV+       G  +    + 
Sbjct: 47  AFLAPHGYHGYFHYAEKKGYSG--------VGLYTRHKPERVI------TGFGNPEFDSE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE+    + V+ +++ S    +  +                L       K S
Sbjct: 93  GRY-----VEVQYPHLAVISVYVPSGSSSEERQQAKFRFMEAFLPHLLQL-------KAS 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246
               V+ GD N     +   +                    +      +   ++ D R  
Sbjct: 141 GREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWIGQLFDMHGYVDVFRQLDPRPE 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             + ++ SDH P
Sbjct: 201 QYTWWSNRGQAYAKNVGWRIDYHLATPKIAGTAHVCSI-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           +SIDY++
Sbjct: 250 LSIDYNY 256


>gi|19074877|ref|NP_586383.1| similarity to CARBON CATABOLITE REPRESSOR PROTEIN 4
           [Encephalitozoon cuniculi GB-M1]
 gi|74621489|sp|Q8SU52|CCR4_ENCCU RecName: Full=Probable glucose-repressible alcohol dehydrogenase
           transcriptional effector homolog; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|19069602|emb|CAD25987.1| similarity to CARBON CATABOLITE REPRESSOR PROTEIN 4
           [Encephalitozoon cuniculi GB-M1]
          Length = 493

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 80/317 (25%), Gaps = 41/317 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              V + ++NI +      ++   + V  +      + Q     + DI+ LQE+  Y+  
Sbjct: 169 GDTVSVGTFNILSNIYATRMTYAPSWVINSEFRREGVLQEIVLYNVDILCLQEIELYSFF 228

Query: 81  AKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKK----------------NVRV 123
                +      + S        K   +       A+  +                 V  
Sbjct: 229 DFYKEQLEMRCNYDSIIYPRGRVKSVPDKKNVDGCAIFWRRSKFRLIAQFPIDFHQKVIQ 288

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
             +        D + +  N     LL   NG+++ V++ H+        ++         
Sbjct: 289 DTRFNTNQELLDRYGKKDNIAIGALLERPNGQQVLVMNTHIFWDPDYPDIKLLQVLLLVE 348

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             ++           +      ++ GDFN   +           ID  D         + 
Sbjct: 349 EIKRV--------SSRHPNACLLLQGDFNSLRSSSVYKSITTPVIDFADFGDTMQHLSNQ 400

Query: 244 RC----------------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +                   N     K  IDY           +     +          
Sbjct: 401 QFGDGLGLNDAYSNQDLGFTNFTPGFKGVIDYIFYGGGISLASVLSPVEDEYTENVAGLP 460

Query: 288 RGKRLSDHCPISIDYDF 304
                SDH  +   + F
Sbjct: 461 NMHFPSDHIFLGAKFAF 477


>gi|262273416|ref|ZP_06051230.1| hypothetical extracellular nuclease [Grimontia hollisae CIP 101886]
 gi|262222394|gb|EEY73705.1| hypothetical extracellular nuclease [Grimontia hollisae CIP 101886]
          Length = 936

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/385 (11%), Positives = 93/385 (24%), Gaps = 102/385 (26%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWK--------------NSVKRTTSDYT-------LL 57
                +++ S+N+                           N   R   D          +
Sbjct: 460 FEGTNLKVASFNVLNYFTSASAIGGDLNVTCDDQADADASNGCNRGAKDAAEFALQQAKI 519

Query: 58  RQYAKNLDADIVFLQEMGSYN-----AVAKVFPK---------NTWCIFYSTERLINHSK 103
                 +DADIV L E+ +       A+A +  +         + +      E  +    
Sbjct: 520 VNALTAIDADIVGLMEVENNGFGDNGALANLVAELNAQFADSADHYAYVIPAEADLTEGA 579

Query: 104 RDSNNDIHTAIAVRKKNVRV-----------LQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
              ++ I  A+  R   V +              S      +        R ++     +
Sbjct: 580 FLGSDAIQVALIYRPARVELKGDARVIRMPEQHISGENPQGEIRQLDKFQRDSLMQTFSL 639

Query: 153 N-GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           N G+ + V   H KS             F D   +      +     A+ L + +   K 
Sbjct: 640 NHGETLSVAVSHFKSKGSGCYEDWVAGEFDDDPADLQGRCNAFRVSAAETLGNALADVKG 699

Query: 201 SLVPFVIAGDFNRKINYLGNN---------------------------DDFWKTIDPN-D 232
                +  GDFN                                    D+  + +     
Sbjct: 700 D---VIALGDFNAYAKEDPIRLLTDYDADTAKRKIVTAAGTSVAGVTLDETAREVGDGFG 756

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +    +       +         +D+ + + +  K +       I   E  +     R 
Sbjct: 757 YINLASEVLGDEAFSYTFDGELGSLDHALGNASVLKKMTGIEDWHINSVESSLFEYPSRF 816

Query: 293 -------------SDHCPISIDYDF 304
                        SDH P+ +   +
Sbjct: 817 TGDLVKSTNPYSSSDHDPVIVSLRY 841


>gi|190338709|gb|AAI63237.1| Smpd2 protein [Danio rerio]
          Length = 420

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 86/306 (28%), Gaps = 46/306 (15%)

Query: 17  TASVAQKVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
                 K+R+ S N   I  LS+                 Y ++ +       DI  LQE
Sbjct: 2   APQQPGKLRVFSLNCWGIRFLSKL------------CAQRYEMIGELLGREQHDIALLQE 49

Query: 74  MGSYNAV----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           + S         K+   + +  ++ +  + +     S + I  A+  +            
Sbjct: 50  VWSERDFLFLKRKLSCSHPYTHYFKSGVIGSGLAVFSKHRIQDALLYQYSL-------NG 102

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      G +    ++VE+ G K  V   HL +                    Q+ 
Sbjct: 103 YPYMLSHGDWFGGKAVGLVIVEVFGLKAHVYVTHLHA-----EYSRAQDGYLPHRIVQSW 157

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLG-----NNDDFWKTIDPNDSLIRFPKEKDSR 244
            L+ ++          ++ GD N     LG     ++          D            
Sbjct: 158 ELQQFVRHTSHGADLVILGGDLNMHPQDLGNRLLRSHTGLRDCYTETDKFDGCEDGHTLI 217

Query: 245 CNANKN-------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            N +             I IDY +M  +    +  ES S    +  D        SDH  
Sbjct: 218 ANNHFTKKQDLIPFEKGIRIDYILMKGSQRVSVKCESLSTTKGSVSDKP---FPYSDHEA 274

Query: 298 ISIDYD 303
           +  D +
Sbjct: 275 LMADLN 280


>gi|206968110|ref|ZP_03229066.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH1134]
 gi|228950924|ref|ZP_04113045.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229068121|ref|ZP_04201428.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
 gi|229176958|ref|ZP_04304353.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
 gi|206737030|gb|EDZ54177.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH1134]
 gi|228606433|gb|EEK63859.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
 gi|228714935|gb|EEL66803.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
 gi|228808651|gb|EEM55149.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 263

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|68477573|ref|XP_717099.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
 gi|68477734|ref|XP_717019.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
 gi|46438715|gb|EAK98041.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
 gi|46438798|gb|EAK98123.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
          Length = 363

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 74/309 (23%), Gaps = 45/309 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
            +RL + NI   ++       +    R       ++      + +I+ LQE+        
Sbjct: 67  TLRLYTNNIRFDNKNYPDKYEQPWEIRKFQSINSMQFNTFQGNGNIICLQEVLHNQLIDI 126

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD---- 135
           +  +     W  +         S   +           +    +   ++ L         
Sbjct: 127 LQGLNDIQEWNYYGVGRTDGEKSGEFAPILYKD-----QDFKIIENSTFWLSPTPHVPSK 181

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            +  A  R    +  +         +I    +            S  L+  + +      
Sbjct: 182 GWDAALERIVTMVTFQSRLNPEIKFNIFNTHY--DHRGVEARRKSSQLIVDKMK------ 233

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKNLRN 253
                +  P  + GDFN + N    +            LI        ++          
Sbjct: 234 ---NYNDYPSFLCGDFNTEPNDEPYHILTKAGFKDGKILIDKKSAYGFETTFTGFDINNE 290

Query: 254 K-IPIDYFVMDQNAYKFLIQE------------------SFSEILYNEDDIKSRGKRLSD 294
               IDY     +  + L                       +   +        G   SD
Sbjct: 291 PISRIDYIW-SPSFTRTLSNSENDTNQDSDDDNDNDKSYEVTLKQFGILSNWFNGHHFSD 349

Query: 295 HCPISIDYD 303
           H P+   Y+
Sbjct: 350 HRPVVSTYE 358


>gi|168180262|ref|ZP_02614926.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum NCTC 2916]
 gi|182668813|gb|EDT80791.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum NCTC 2916]
          Length = 263

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 88/297 (29%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N +               ++       L +     + D++ LQE+        +
Sbjct: 1   MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49

Query: 84  FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           F       F             +  +++        +     +A+  K+    ++S+ + 
Sbjct: 50  FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYIS 109

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +KD       R+ ++  ++ N   I+    HL    + D  E+           Q   L
Sbjct: 110 KSKDKNFWK-TRKIIKCKIDYNNNPIYFYSCHL--GWWDDEEED--------FKSQVNKL 158

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----N 246
              +          ++ GD+N          D+       D       + +        +
Sbjct: 159 VQELK----EKETCILMGDYNNDAFLNNKGYDYLINKKLKDIYHLARSKDNGVTAIGDID 214

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K     + +D  + ++N      +  F+ I             +SDH  +    +
Sbjct: 215 GWKGNTKNMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262


>gi|150024176|ref|YP_001295002.1| exodeoxyribonuclease III [Flavobacterium psychrophilum JIP02/86]
 gi|149770717|emb|CAL42181.1| Exodeoxyribonuclease III [Flavobacterium psychrophilum JIP02/86]
          Length = 253

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/307 (9%), Positives = 87/307 (28%), Gaps = 81/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           ++++S+N+N +                 +       + +  + D++ LQE+ +       
Sbjct: 1   MKIISYNVNGIRA---------------AITKGFIDWLQAANPDVICLQEIKATQDQIPT 45

Query: 81  -AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            A       +  ++S +              ++ +A+  K          + G +     
Sbjct: 46  DAITAAGYPYQYYFSAQ-----------KKGYSGVAILCKTEP----KNIVFGTEIDHMD 90

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      + ++   + ++ ++L S                         +++I   K
Sbjct: 91  FEGRN-----IRVDFDDLSIMSLYLPSGT--------NIERLDHKFMFMDDFQNYINNLK 137

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRC 245
             +   +I GD+N     +  ++                          +   +  +   
Sbjct: 138 TKIPNLIICGDYNICHEAIDIHNPTQNAKTSGFLPEERAWLDAFIKSGFVDSFRHFNKEP 197

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           IDY ++ +   + + +                  + SDHC
Sbjct: 198 HHYSWWSYRAGARGNNKGWRIDYNLVSETLKERIKRAIIL-----------PDAKHSDHC 246

Query: 297 PISIDYD 303
           P+ ++ +
Sbjct: 247 PVLVEVE 253


>gi|59711773|ref|YP_204549.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           fischeri ES114]
 gi|59479874|gb|AAW85661.1| endonuclease/exonuclease/phosphatase family superfamily [Vibrio
           fischeri ES114]
          Length = 325

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 77/302 (25%), Gaps = 47/302 (15%)

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
           +           +     L++D++  QE+ S NA+  +  +  +  F + +   +     
Sbjct: 19  TQDEWQKKQGWFKDKITELNSDVIGFQEVFSPNALKALVDELGYAYFCTVDEPKSEDG-Y 77

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
             N    A A R   +             +       NR  V   +E+    I    +  
Sbjct: 78  VFNSPVVAFASRYPILNAQPVIAEQTQLERFGIEFEFNRIPVHASIELPHLGITDCYVVH 137

Query: 165 KSFCFLDSLENTYSPSCS--------------------LLSQQAQWLKDW-ITQKKESLV 203
                    E                                +A  L +  I Q+K++  
Sbjct: 138 FKSQRPKEPEVNNEIDEESLSSLNQLHNEQLGSWLSTAQRGLEANILHNHIIQQRKKTNQ 197

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------------------PKEKDSRC 245
             V+ GDFN+ + +          +  +     +                      + R 
Sbjct: 198 AIVVMGDFNKPLFHDEFKGLLSHELRFDKFSSDYLAQFQLKDSWNLYGKLKGIDLLEERT 257

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------IKSRGKRLSDHCPIS 299
             +        +DY ++               + Y   D           +  +DH  +S
Sbjct: 258 YTHYYGAKGSVLDYILLSNEFDSSFSGNILEVVDYTVTDKHIVNPTFDIDQFSTDHALVS 317

Query: 300 ID 301
           I 
Sbjct: 318 IT 319


>gi|12852610|dbj|BAB29476.1| unnamed protein product [Mus musculus]
          Length = 278

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 35/287 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A  +R+ ++N+ +  + +       SV         + Q       DI  +QE+   +  
Sbjct: 19  ATALRIGAFNVQSFGDNKVSDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 67

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           AV+ +  +      +    + +                RK    V   +Y     +D   
Sbjct: 68  AVSLLMEQINRVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVASV-VSTYQYPDPED--- 123

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A +R    +   +           L       +     +   +L       +  W    
Sbjct: 124 -AFSREPFVVKFSVPS----CATKELVLIPLHAAPHQAVAEIDALYDVYLDVIDKW---- 174

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    +   DFN    Y+  +D     +  ++       +       N +       D
Sbjct: 175 --NTDDMLFLCDFNADCKYVKAHDWPSIRLRSSEVFKWLIPDSAHTTVGNSDCAY----D 228

Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             V+      + L   S S   + E+    + + L  SDH P+ + +
Sbjct: 229 RIVVSGAHLRRSLKPHSASVHNFQEEFDLDQTQALAISDHFPVEVTF 275


>gi|322388347|ref|ZP_08061951.1| exodeoxyribonuclease [Streptococcus infantis ATCC 700779]
 gi|321141019|gb|EFX36520.1| exodeoxyribonuclease [Streptococcus infantis ATCC 700779]
          Length = 340

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 81/306 (26%), Gaps = 56/306 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + +       + Q     +ADI+ +QE          
Sbjct: 66  MKLISWNIDSLNAALTSDSARAKLSQD------VLQTLVAENADIIAIQETKLSATGPTK 119

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S   +  R
Sbjct: 120 KHLEVLEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDSEGR 178

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +                  ++    L        +   
Sbjct: 179 I-----ITLEFDTFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKQK 225

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +     + +  +        F           
Sbjct: 226 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHIHGDVPERY 285

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 286 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVSKSDMIDSGARQ-----------DHTPI 334

Query: 299 SIDYDF 304
            ++ DF
Sbjct: 335 VMEIDF 340


>gi|242004144|ref|XP_002422991.1| Recombination repair protein, putative [Pediculus humanus corporis]
 gi|212505907|gb|EEB10253.1| Recombination repair protein, putative [Pediculus humanus corporis]
          Length = 332

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 78/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
            ++ SWN+ +L      +                 +Y +    D++  QE   S      
Sbjct: 78  FKISSWNVVSLKSITNKNGM---------------EYVRRESPDVMCFQETKCSEKNAPS 122

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  +++      ++           +A+  K   +  +        D+  R   
Sbjct: 123 ESKLPGYHRYFAAGVKEGYA----------GVALYSKLKPLSVKIGIGHKEHDTEGR--- 169

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++    +  +++  ++ +                      + L        +S 
Sbjct: 170 ------VITAEYEDFYLVTAYVPNAGRGLVTLPKRLKWDVAFKGYLKKL--------DSE 215

Query: 203 VPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GD N   N +                   D +  +     +  F K   ++  A
Sbjct: 216 KPVILCGDLNVAHNEIDLKNPSTNTKTAGFTQEERDGFTKLLNAGFIDTFRKLYPNKEGA 275

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DYFV+ +     +      + +Y            SDHCPI
Sbjct: 276 YTYWNYIGNARSRNAGWRLDYFVVSERIMSTVCDSVIRKEVY-----------GSDHCPI 324

Query: 299 SI 300
           ++
Sbjct: 325 TL 326


>gi|163745339|ref|ZP_02152699.1| hypothetical protein OIHEL45_07110 [Oceanibulbus indolifex HEL-45]
 gi|161382157|gb|EDQ06566.1| hypothetical protein OIHEL45_07110 [Oceanibulbus indolifex HEL-45]
          Length = 322

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/338 (10%), Positives = 92/338 (27%), Gaps = 64/338 (18%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++  + + A+ +R+ ++N   LS +    L ++ ++      + + Q     + DI+ LQ
Sbjct: 1   MLLASIAQAEPLRIATFNTE-LSRKGPGLLLRDILRGDDPSVSSVVQTISAANPDIIVLQ 59

Query: 73  EMG--------SYNAVAKVFPKNTWCIFYSTERLINHS-----------------KRDSN 107
            +         +  A A       +   ++                              
Sbjct: 60  GIDYDLELSALTALADALTAAGAPYPYRFAAPPNAGRQSGVDLNGDGKLGGPRDAHGYGR 119

Query: 108 NDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRAVELL-------- 149
                A+A+  ++            ++ +  P                            
Sbjct: 120 FFGQGAMAILSRHPILTEDLQDFSTLIWRDLPSSLYPMIDGTPFAGAKAHATQRLSSNSH 179

Query: 150 ----VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               +E+    I +L  H     F    +     +    +     L   I        PF
Sbjct: 180 WSLPIELPDGSITLLTYHATPPVFDGPEDRNGRRNHDETAFWVHHLAGEIGT--PPTHPF 237

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           ++ GD N          D   T+  + S+     +  +   +       + +DY +  ++
Sbjct: 238 ILLGDANLDPTRGDGRGDAITTLLAHPSIQDPLPDHPTVNWSQT---GPMRVDYLLPSRD 294

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++ +                 +G   S H  + +D  
Sbjct: 295 -WQVVDAGLIW----------PKGDTASRHALVWVDLT 321


>gi|145224965|ref|YP_001135643.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK]
 gi|145217451|gb|ABP46855.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK]
          Length = 269

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 77/307 (25%), Gaps = 82/307 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++LV++NI                     D          LDADI+ LQE+ S  A + 
Sbjct: 6   PMKLVTFNILHGRTPG-----------AEVDLDRFVDCVAGLDADILALQEVDSIQARSG 54

Query: 83  VFPKNTWCIFYSTER---------------LINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +             R                +  +  +        +A+  +   V  Q 
Sbjct: 55  LADLTALAAEAMGARSHRFVAAIAGTPGATWMAATGEEQPGTAAYGVALLSRYPAVSWQV 114

Query: 128 YPLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
             L      F                 R AV    +    ++ V + HL      +    
Sbjct: 115 ARLPRIPFPFPLYLREPRKVVVVHEEPRAAVIGRFDTPLGELTVANTHLSFVPGWNRY-- 172

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                          L   +   +    P+++ GD N                 P     
Sbjct: 173 --------------QLHHLMRDVRGLPSPWIVTGDLNMPAK-------------PARRWS 205

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           R      +        R    +D+ + D+ A             +      +    +SDH
Sbjct: 206 RLRCLASAPTFPA--DRPTRQLDHVLTDEPA-------------FTIRSYDTPEMAISDH 250

Query: 296 CPISIDY 302
            P+ +D 
Sbjct: 251 RPLVVDL 257


>gi|291396737|ref|XP_002714939.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral-like
           [Oryctolagus cuniculus]
          Length = 423

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 74/296 (25%), Gaps = 42/296 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  +N+N               K   +  T L  +      D+  LQE+ S      +
Sbjct: 9   LRV--FNLNY-------WGIPYLSKHRAARLTRLGDFLNLESFDLALLQEVWSEQDFQYL 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-----LLGAKDSFS 138
             K +             +    +  I + + V  K+       +               
Sbjct: 60  KQKLS--------PTYPAAHYFRSGIIGSGLCVFSKHPIQDTTQHVYTLNGYPYMIHHGD 111

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +    L++ ++G  +     HL +               +    QA  L  +I   
Sbjct: 112 WFCGKAVGLLVLHLSGLVVNAYVTHLHA-----EYSRQKDIYLAHRVAQAWELAHFIHHT 166

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255
            +     ++ GD N     LG      W  +       +  +  +  C            
Sbjct: 167 SKKADVVLLCGDLNMHPKDLGCRLLKEWTGLFDAYLEAQDFQGSEEGCTMVPGNCYVSQQ 226

Query: 256 ---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     IDY +  +      I                 G  LSDH  +    
Sbjct: 227 DLKLFPCGIRIDYVLY-KAVPGLCISC--KTFRTTTGHDPHNGSPLSDHEALMATL 279


>gi|256847688|ref|ZP_05553133.1| exodeoxyribonuclease III [Lactobacillus coleohominis 101-4-CHN]
 gi|256715377|gb|EEU30353.1| exodeoxyribonuclease III [Lactobacillus coleohominis 101-4-CHN]
          Length = 275

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI+  S    ++        T      +         D++ +QE          
Sbjct: 1   MKFISWNID--SINAALTGTSTRAGETRDVLHKIADLV----PDVIAIQETKLSKNGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   ++   S  +     +       +     + SYP +GA +     G  
Sbjct: 55  KHFTVLNELFPDYQVAWRSSVEPARKGYAGTMYLYRTGLTPKISYPQIGAPEPMDNEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V +++  +                   +  Q L            
Sbjct: 114 -----MITLEFPYFFVTEVYTPNSGTGLRRLAERQIWDDRYREYLQQLDQ--------QK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                   +     + +  +        F         A 
Sbjct: 161 PVIASGDFNVAHEPIDLAHPENNHHSAGFTDEEREHFTKLLKAGFTDSFRHLHPEEKGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       +++ S  +                DH PI
Sbjct: 221 SWWAQRVITSKQNNSGWRIDYWLVSDRIADKVVKSSMIDTGARR-----------DHTPI 269

Query: 299 SIDYD 303
            +D D
Sbjct: 270 ELDID 274


>gi|148379569|ref|YP_001254110.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|153934095|ref|YP_001383947.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|148289053|emb|CAL83143.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|152930139|gb|ABS35639.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 19397]
          Length = 263

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 88/297 (29%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N +               ++       L +     + D++ LQE+        +
Sbjct: 1   MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49

Query: 84  FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           F       F             +  +++        +     +A+  K+    ++S+ + 
Sbjct: 50  FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYIS 109

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +KD       R+ ++  ++ N   I+    HL    + D  E+           Q   L
Sbjct: 110 KSKDKNFWK-TRKIIKCKIDYNNNPIYFYSCHL--GWWDDEEED--------FKFQVNKL 158

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----N 246
              +          ++ GD+N          D+       D       + +        +
Sbjct: 159 VQELK----EKETCILMGDYNNDAFLNNKGYDYLINKKLKDIYHLARSKDNGVTAIGDID 214

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K     + +D  + ++N      +  F+ I             +SDH  +    +
Sbjct: 215 GWKGNTKDMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262


>gi|91216089|ref|ZP_01253057.1| exodeoxyribonuclease [Psychroflexus torquis ATCC 700755]
 gi|91185606|gb|EAS71981.1| exodeoxyribonuclease [Psychroflexus torquis ATCC 700755]
          Length = 260

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 96/306 (31%), Gaps = 76/306 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +++++VS+N+N +                 +    L  + K  DAD+V  QE        
Sbjct: 5   EEMKIVSYNVNGIRA---------------ALKKGLIDWLKTTDADVVCFQE-------T 42

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K  P+      +      N     +    ++++ +  K+       +   G    +    
Sbjct: 43  KAQPEQIDNSIFENIGYNNCYWYSAEKKGYSSVGILCKSEP----KHVEYGTGIDYMDRE 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      + ++ + + ++ ++L S      L                  K +I   K+ 
Sbjct: 99  GRN-----LRVDFEDVSIMSLYLPSGTNDARLNYK--------FTYMDDFKVYIENLKKE 145

Query: 202 LVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRC 245
           + P VI GD+N     +  +D                   K +  +  +  F K  +   
Sbjct: 146 IPPLVICGDYNICHEAIDIHDPVRLKTVSGFLPAEREWLSKFLKDSGFVDSFRKLNEDVV 205

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           +DY ++          +   ++++    +       SDHC
Sbjct: 206 H-YSWWSYRANARQNNKGWRLDYLLV---------AQEIEDLVFRSVILPDAKH--SDHC 253

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 254 PVLLEL 259


>gi|83645744|ref|YP_434179.1| beta-glucanase/beta-glucan synthetase [Hahella chejuensis KCTC 2396]
 gi|83633787|gb|ABC29754.1| Beta-glucanase/Beta-glucan synthetase [Hahella chejuensis KCTC 2396]
          Length = 1140

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 78/283 (27%), Gaps = 56/283 (19%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
               VR++++N+ T    +            +     + +  +  + D++ LQE       
Sbjct: 910  GDSVRVMTFNVRTEQANDPGERN------WSHRKGEVVRTIQRQNPDLLGLQETTGGQ-- 961

Query: 81   AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                           + + N    +     +  I  R      +      L A       
Sbjct: 962  --------------YDFIKNTLGANWGATSYRQILYRSDRYTYVDGGLIDLVA----DVW 1003

Query: 141  GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            G R A    +  N     ++ I+       +S + +           A  L+D + +  +
Sbjct: 1004 GPRSAEWAKMRRNADGRELVFINTHWGVDGNSQQGS-----------ANILRDRLGEVNQ 1052

Query: 201  S-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            +   P V+ GD N        N    +                     N N++    +D+
Sbjct: 1053 NWGTPTVLLGDLNAIPGSGPVNTLVNQ--------TPLNSFFSGGTFNNWNVQAGDQLDH 1104

Query: 260  FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       +    +      +  +      SDH PI+ + 
Sbjct: 1105 V----------VGSRVNAAGCALETYREGDYPPSDHYPIACEL 1137


>gi|325263881|ref|ZP_08130614.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           sp. D5]
 gi|324030919|gb|EGB92201.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           sp. D5]
          Length = 351

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 96/322 (29%), Gaps = 68/322 (21%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +   ++++N                G  +   S +   ++   +    K+ DADI FLQ
Sbjct: 53  GESFTVLTYNTGYAGLSKDEDFFMDGGSKVQPESKELIENNLNGITSILKDQDADIYFLQ 112

Query: 73  EMGSYNAVAKVFPKNTWC---------------IFYSTERLINHSKRDSNNDIHTAIAV- 116
           E+   +  +    +  +                + Y    L    K  S     T ++V 
Sbjct: 113 EVDRDSKRSYHIDEQEYYEQELGLPGMFACNFKVDYVPYPLPPIGKVTSGLVTMTGLSVS 172

Query: 117 -RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
              +       S+P+            R      ++ + K++ +++ HL+++        
Sbjct: 173 KASRIALPESFSWPIKTCNLKRCMLETRIP----IKDSDKELVLINFHLEAY-------- 220

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK---INYLGNND-------DFW 225
               S      Q++ L + +  + E     +  GDFN+    +     +D          
Sbjct: 221 ---DSGEGKIAQSKLLAEKLASEYEKGNYVIAGGDFNQTFEGLETYPVHDKDSWVPGVIG 277

Query: 226 KTIDPNDSLIRFPKEKD------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
           K + P                     + N        +D F++  N     +    ++  
Sbjct: 278 KEVIPEGFSYAVANNAPTCRLLNGPYSGNYEDSQVYVLDGFIVSDNIEVSKVVNIDTDFE 337

Query: 280 YNEDDIKSRGKRLSDHCPISID 301
           Y             DH P+ ++
Sbjct: 338 YT------------DHQPVRVE 347


>gi|261193611|ref|XP_002623211.1| DNA lyase Apn2 [Ajellomyces dermatitidis SLH14081]
 gi|239588816|gb|EEQ71459.1| DNA lyase Apn2 [Ajellomyces dermatitidis SLH14081]
          Length = 629

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 78/331 (23%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           VRL +WN+N +        W     R    +  +      LDADIV  QE  +   +   
Sbjct: 2   VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALDADIVIFQETKIQKKDLQD 53

Query: 82  KVFPKNTWCIFYSTERLI---NHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDSF 137
            +   N W  F+S  +          +    I    A           +  P       +
Sbjct: 54  DMVLVNGWDCFFSLPKNSKCCPIRAEEGITGILCLPASVSPFPSPTSFRDLPEEAQIGGY 113

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQAQWLKDWI 195
             A      ++       +   + +   +F  +                +     L   +
Sbjct: 114 PTAEQLALSDVDASTLDSEGRCMILEFPAFVLIGVYCPANRDETRDGFRTGFVNILDARV 173

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS---------------------- 233
                     ++ GD N   + + +     +    N +                      
Sbjct: 174 RNLVAMGKRVIVTGDLNICGSEIDSARALEEIRKGNLTDSEFVSAPVRRVFNQLVYGGKV 233

Query: 234 -------------LIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFLI 271
                        +    K    R                     IDY + D+    +  
Sbjct: 234 IGDRDQGRETPILVDLCRKYHPDRPGMYTCWEQRVNARPGNYGSRIDYVLCDKRMEDWFS 293

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +              G   SDHCP+  D 
Sbjct: 294 ASNIQ-----------EGLMGSDHCPVFADL 313


>gi|92115234|ref|YP_575162.1| endonuclease/exonuclease/phosphatase [Chromohalobacter salexigens
           DSM 3043]
 gi|91798324|gb|ABE60463.1| Endonuclease/exonuclease/phosphatase [Chromohalobacter salexigens
           DSM 3043]
          Length = 271

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/288 (10%), Positives = 81/288 (28%), Gaps = 54/288 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEM 74
             +RL++ N+           +            +      L+    +  D DIV LQE+
Sbjct: 14  HSLRLLTCNLQVGIHTSAYHHYLTRSWQHVLPHPKRQGRLDLIGDTLR--DYDIVGLQEV 71

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +  +    +  +       +           + +     +  N  + + +   +   
Sbjct: 72  DGGSFRSGHVNQVEYLA-----KRGGFPHHYQQLNRNLGRVAQHSNGLLSRLTPRQVDEY 126

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R A+          + ++  HL                    ++Q  +L + 
Sbjct: 127 RLPGTLPGRGAIHARFGEGPDALHLVVAHLALGH-------------RTRTRQLDYLSEI 173

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I      L   V+ GD N   + +  +  F   +  +   +           +    + +
Sbjct: 174 IQ----PLRHVVVMGDLNCTPDQINAHQRFCHALPLHPVAMPL---------SYPAWQPR 220

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +D+ ++    +               +  +   +  SDH P+++D 
Sbjct: 221 RALDHILISSALHA--------------ERFEVLDRLFSDHLPVAVDI 254


>gi|30018623|ref|NP_830254.1| exodeoxyribonuclease III [Bacillus cereus ATCC 14579]
 gi|218231797|ref|YP_002365209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus B4264]
 gi|228956830|ref|ZP_04118615.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229042269|ref|ZP_04190021.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
 gi|229125865|ref|ZP_04254890.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
 gi|229143158|ref|ZP_04271590.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
 gi|296501195|ref|YP_003662895.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171]
 gi|29894164|gb|AAP07455.1| Exodeoxyribonuclease III [Bacillus cereus ATCC 14579]
 gi|218159754|gb|ACK59746.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus B4264]
 gi|228640239|gb|EEK96637.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
 gi|228657523|gb|EEL13336.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
 gi|228727060|gb|EEL78265.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
 gi|228802871|gb|EEM49704.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|296322247|gb|ADH05175.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171]
          Length = 263

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLKG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|57168378|ref|ZP_00367512.1| exodeoxyribonuclease III [Campylobacter coli RM2228]
 gi|305432793|ref|ZP_07401952.1| exodeoxyribonuclease III [Campylobacter coli JV20]
 gi|57020186|gb|EAL56860.1| exodeoxyribonuclease III [Campylobacter coli RM2228]
 gi|304444190|gb|EFM36844.1| exodeoxyribonuclease III [Campylobacter coli JV20]
          Length = 252

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 79/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +    + D +  QE+    A    
Sbjct: 1   MKLLSWNVNGLRAICDKNA---------------LDWIIKENIDFIGFQEI---KAHEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 43  FPKKIYEYPFKHMYSNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   +      +      + L            
Sbjct: 91  -----VLEHRFKNIALFNIYFPNGQKDEERLSFKMKFYAKFLVYLEKLLK-------DGF 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGDIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF +       L      + ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISTGLKDKLKNAFIRDDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|319944723|ref|ZP_08018987.1| hypothetical protein HMPREF0551_1835 [Lautropia mirabilis ATCC
           51599]
 gi|319741972|gb|EFV94395.1| hypothetical protein HMPREF0551_1835 [Lautropia mirabilis ATCC
           51599]
          Length = 484

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 97/311 (31%), Gaps = 54/311 (17%)

Query: 42  LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
             ++  +   +    L +  +    DIV +QE+   +AV +V  K       +       
Sbjct: 176 GPQHRRQDLDAKVRQLAELVRTARPDIVLMQEITDADAVRQVLGKGWTIHTTAERWNGGP 235

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK----- 156
             ++      T   +++  V V++    L  +     R     AV L + +  K      
Sbjct: 236 ISQNLAVAWPTHRFLQEPRVEVVES---LARSSPEGRRTRPGLAVYLPLPVPEKPSGTPP 292

Query: 157 --------IWVLDIHLKSFCFL----------DSLENTYSPSCSLLSQQAQWLKDWITQK 198
                   + +L++HLK+ C             + +     SC  L  Q   L+ W+ ++
Sbjct: 293 KAARPAPTLAILNVHLKAGCRQGRLDRSLSRQPTRQWRRLSSCQTLQSQVPALEGWLDRQ 352

Query: 199 KESLVPFVIAGDFNRKI----------------------NYLGNNDDFWKTIDPNDSLIR 236
             +    +I+GDFNR +                                   + +D   R
Sbjct: 353 MAAGHAVLISGDFNRDLRQELRQGLPARGDGSPAAAPIRTSDEMRRVASVLPELDDDQPR 412

Query: 237 FPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQES----FSEILYNEDDIKSRGKR 291
             +         + L      ID F++  N   +L           + +       R  R
Sbjct: 413 GTRLTLVASGPYRKLARCHHHIDVFLLSHNLDAWLRTPPEDLRVQVVPFEAPLSLER-PR 471

Query: 292 LSDHCPISIDY 302
            SDHCP  +  
Sbjct: 472 PSDHCPHVLQL 482


>gi|221221062|gb|ACM09192.1| Deoxyribonuclease gamma precursor [Salmo salar]
          Length = 331

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 33/288 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +++ S+N+  L           S     +    L +        ++ + E+         
Sbjct: 1   MKVASFNVRRLGT---------SKVNDKNVLKYLIKIVSRYS--VLLILEVVDRTGKAMA 49

Query: 79  -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + ++           T        RD+  +       R+ +V++   SY     K   
Sbjct: 50  MFLKELNDTRANKKHPYTMVKSPRLGRDTYKEQFV-FLYRQDHVKLT-HSYQYKDNKVGD 107

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             A  R    L        +  L +        DS++        +   + +W       
Sbjct: 108 EDAFAREPYILRFTCLNTVLKDLVLIPVHTKPEDSVKELDKLYDVVKVVKKKW------- 160

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   +I GDFN   +Y+   D     I  ++       +         N      I
Sbjct: 161 ---KTDHIMILGDFNADGSYVTKGDMTNIRIRSDEKFHWVIGDDVDTTANTSNDHTYDRI 217

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303
              +   +    ++  S     +++    S+   L  SDH P+ ++  
Sbjct: 218 --VMYGDDMLNAMVPNSAKPFNFHKAFRLSKAMALSISDHYPVEVELT 263


>gi|289741285|gb|ADD19390.1| transcriptional effector CCR4-related protein [Glossina morsitans
           morsitans]
          Length = 352

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 85/294 (28%), Gaps = 19/294 (6%)

Query: 20  VAQKVRLVSWNI---NTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + RLVS+NI   + L E   +    +S           L+   + L  DI+ LQEM 
Sbjct: 66  APNQFRLVSYNILAQDLLVEHLQLYQGIHSKLLHWEHRLEKLKSELEILQPDILCLQEMQ 125

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            YN +     + +              +R        AI   +   ++           D
Sbjct: 126 -YNHLKSFVQELSHKRKVEYIFKKKTGRRTDG----CAIIYDRNKFKLDDDQCVEYYTND 180

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             +      A+    ++         +      +    E+       +L    + L  + 
Sbjct: 181 VATLNRENVAIMAKFQVRNDPSTEFIVATTHLLYNPRREDVRISQVGVL---LRALASFA 237

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            + K S +P ++AGDFN   +         +             +  S   +       +
Sbjct: 238 IRSKHSRLPTILAGDFNFTPDTDAYKCLVTQRKFNEYLFQMESIDFGSDAVS-TFQDEWV 296

Query: 256 PIDYFVMD------QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +DY +        ++       +  +                SDH  ++I + 
Sbjct: 297 TVDYILKSIAEDKEKSITIESTYKLPTAESCMNIGKIPNTFLGSDHFSLAISFS 350


>gi|222149124|ref|YP_002550081.1| hypothetical protein Avi_2877 [Agrobacterium vitis S4]
 gi|221736109|gb|ACM37072.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 277

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 86/289 (29%), Gaps = 55/289 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            + +  + + S+N++     +G             D   +    + +  D++ LQE    
Sbjct: 34  PAGSPGLLVASYNVHKCVGVDGRF-----------DPERVLHVIREIGPDVIALQEADQR 82

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                           +    +  +    ++     + + ++ V      + L G     
Sbjct: 83  FGDRTGLLDLARLQGEAGLTRVPVAGLPKSHGWRGNVLLFREGVVRNVHPFVLPGL---- 138

Query: 138 SRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                R AV   ++   G+++ ++  HL    +                QQA ++   + 
Sbjct: 139 ---EPRGAVVAEIDLDGGRELRIIAAHLGLLRW-------------ARRQQADFILKLMR 182

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           ++ +   P V+ GDFN      G+    ++ +                          + 
Sbjct: 183 ERADC--PTVLMGDFNEWRVGPGSALTRFEPLFGPLPPPVPSFPARLPV---------LA 231

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDYD 303
           +D  + ++             I   +       +  SDH P+   ID D
Sbjct: 232 LDRIMTNRPGL----------IADMQVHDSPLARLASDHLPLKAWIDLD 270


>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
          Length = 1080

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 80/299 (26%), Gaps = 43/299 (14%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             P      +++ + ++N+  L +     L       T           ++ DADI+ LQ
Sbjct: 182 ASPGALPPPEELTVATFNV--LFDLHEAELLD-----TPRRIPAALSLLRSADADIIALQ 234

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+      A +        ++            +         +  +             
Sbjct: 235 EVTEPFLRALLETPWIREHYFL------SEGPGAATVTPYGQLLLSRFPFASLSQCVFSR 288

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            K           +   + + G  +WV  +HL S             S S  + Q + + 
Sbjct: 289 DKR---------VIAGEIRLKGGTLWVATLHLTSHRAH--------ASSSSRAAQLRAIV 331

Query: 193 DWITQKKESL---VPFVIAGDFNRKINYLGNND-------DFWKTIDPNDSLIRFPKEKD 242
            W              V+AGDFN   +    +        D W  + P +    F  E++
Sbjct: 332 GWANALGTQGLHSPDVVLAGDFNFSEDAPEGHAFAQHGFTDVWPLLRPGEPGYTFDPERN 391

Query: 243 SRCNANKNLRNKIPIDYFVM---DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                      +  +D  ++           +       L   +         SDH  +
Sbjct: 392 GLATVMTVSGRRQRLDRVLVRSPSGRLTPRAVTLFGETPLPAPEAPAGGPLFTSDHFGV 450


>gi|305666513|ref|YP_003862800.1| hypothetical protein FB2170_09596 [Maribacter sp. HTCC2170]
 gi|88708780|gb|EAR01015.1| hypothetical protein FB2170_09596 [Maribacter sp. HTCC2170]
          Length = 314

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 94/318 (29%), Gaps = 63/318 (19%)

Query: 2   IRKYVLALVFFLV-----------PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT 50
            ++++L+    L+             + +  + + +    I T +    +    +     
Sbjct: 39  KKQFLLSFSIVLLGYFTQSTFFKTSSSNNETEDLDIG---ILTFNTHGSMGTKWSREPVF 95

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
             D   + ++    D+DIV +QE        K F +  +           +  +      
Sbjct: 96  AED---ITRFIAKEDSDIVCIQEFDYKKV--KDFKRYPYKYVNYIFPNQKYVVQS----- 145

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
                +  K   + + S     ++++        A+   + I    + V ++HL+S  F 
Sbjct: 146 -----ILSKYPIIEKGSLDFPDSRNN--------AIYADILIKKDTVRVYNLHLQSLRFR 192

Query: 171 DSLENTY------SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
             +                L +Q +  +             +I GDFN        N   
Sbjct: 193 AGMIKREEPQRLFKRLNGSLQKQLEQAELVKEHGNNVDYKKIICGDFNNTQFSNVYNSIK 252

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
            +  D       F ++     N          ID+ +MD+                    
Sbjct: 253 GEMNDS------FQEKGSGFGNTYNFRFLPFRIDFILMDKEI--------------EITS 292

Query: 285 IKSRGKRLSDHCPISIDY 302
            K+   +LSDH P+   +
Sbjct: 293 HKNFNIQLSDHEPVMASF 310


>gi|67481873|ref|XP_656286.1| endonuclease/exonuclease/phosphatase domain containing protein
           [Entamoeba histolytica HM-1:IMSS]
 gi|56473475|gb|EAL50900.1| endonuclease/exonuclease/phosphatase domain containing protein
           [Entamoeba histolytica HM-1:IMSS]
          Length = 320

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 88/314 (28%), Gaps = 41/314 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R++++N+         +   +   R            +  D DI+  QE+       
Sbjct: 13  KPIRILTYNMYLRPMLISAAGHDHKDSRLKVFCKE-----RLKDFDIICFQEVFKELNWR 67

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +              R+               + +  +   V  Q + L           
Sbjct: 68  REKLLKKAKKAGFKYRIQTEKPLFPLFLCDAGLIIISRFPIVENQ-FKLYKRSIYADAVA 126

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKK 199
           ++  +   +EI + K + V + H ++   LD       PS  +   Q +    ++  +  
Sbjct: 127 SKGVLYAKIEIQSNKYLHVFNTHTQADYTLDPE--KAKPSRDVRLSQIRKYAKFVQKKCN 184

Query: 200 ESLVPFVIAGDFNRK-------INYLGNNDDFWK------------TIDPNDSLIRFP-- 238
               P +  GDFN                 +F +             +  N  +      
Sbjct: 185 NDTFPVICCGDFNVNGRAGTDGTTESPEYTEFLQNFHFDSGELIDLLLRDNHGIQPVTFG 244

Query: 239 ------KEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                    ++ C+          +K  +DY    +   +  +    +  +        +
Sbjct: 245 DSFIDENGTETPCDTEITYEVSCMDKSRLDYMFHWKKPNENPVITCKNCRVDKFQVSGKK 304

Query: 289 GKRLSDHCPISIDY 302
              +SDH  ++ D 
Sbjct: 305 YPFMSDHFGVTCDI 318


>gi|315186595|gb|EFU20354.1| exodeoxyribonuclease III Xth [Spirochaeta thermophila DSM 6578]
          Length = 256

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 79/306 (25%), Gaps = 80/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           V + SWN+N +                 +    L  + +    +I+ LQE  +      +
Sbjct: 2   VSVYSWNVNGIRA---------------AAKKGLLDWIEKERPEILCLQETKARRDQLPS 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++   + +  +++      +S                  +  L +   +           
Sbjct: 47  ELARPDGYHTYWAEADKPGYSGVA---------------LFTLYEPVSVEPLGVEAFDRE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +         +  +     +  +     C+        +K+       +
Sbjct: 92  GR-----TLIADFGSFVFFGCYFPNSQEAGARLDYKLAYCN-------AVKERADAYVAA 139

Query: 202 LVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               +I+GDFN                   YL    ++      +  +  F        +
Sbjct: 140 GRHVLISGDFNIAHTPLDLARPEANEKNPGYLPEEREWMTYFLSSGYVDTFRMFTKEGGH 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY  +++     + +               +    SDHCP
Sbjct: 200 -YTWWTYRFKAREKDIGWRIDYHCVNEGFKDKVKESVIL-----------KNVMGSDHCP 247

Query: 298 ISIDYD 303
           + I  D
Sbjct: 248 VKITLD 253


>gi|297160401|gb|ADI10113.1| hypothetical protein SBI_06993 [Streptomyces bingchenggensis BCW-1]
          Length = 255

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 69/259 (26%), Gaps = 32/259 (12%)

Query: 62  KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVR 117
           +    D++ LQE+      N    +  +      ++        +    +  I    AV 
Sbjct: 6   RRHARDVLGLQEVWADGDENLAGWLAQRLGMHWTWAASDSPQKWQHRIGDPTIDFGNAVL 65

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +     +    L  A         R A+  LV+           HL          N  
Sbjct: 66  SRWPIAERDVARLPAAGGPDD---GRLALYALVDAPSHPAPFFTTHL----------NAD 112

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNN-------------DD 223
               ++   Q   L  +I +++ +   P V+ GD+N   +                    
Sbjct: 113 LHESAVRCAQVTALARFIAERRGAGPFPPVVTGDYNAWPDSDEMRLLGGCRTAPAVPGQV 172

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                +  D    +     +     +     + IDY  +       L     S     + 
Sbjct: 173 LLDVWEYADPAAPWATWDAANPYVARTFEPSVRIDYIHVGPPGPDGL-GHVRSVRRAGDG 231

Query: 284 DIKSRGKRLSDHCPISIDY 302
            +   G   SDH  +  + 
Sbjct: 232 PVDEVGVWPSDHAAVVAEL 250


>gi|297849552|ref|XP_002892657.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297338499|gb|EFH68916.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 444

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 80/300 (26%), Gaps = 53/300 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+    E   ++L              +    +     ++  QE+     +  +
Sbjct: 176 LKILSYNV-WFREDLELNL----------RMRAIGHLIQLHSPHLICFQEVTPE--IYDI 222

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F K+ W   YS            +   +  +  +        +S+         +    R
Sbjct: 223 FRKSNWWKAYS---CSVSVDVAVSRGYYCMLLSKLGVKSFSSKSF--------GNSIMGR 271

Query: 144 RAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 VE+  GK +     HL+S C                 +QA+   + +       
Sbjct: 272 ELSIAEVEVPGGKPLVFATSHLESPCPGPPKW--DQMFSRERVEQAKEAIEILR----PN 325

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPND----SLIRFPKEKDSRCNANKNLRNKIPID 258
              +  GD N      G      K +D  +      + F  +  +    + N   +  +D
Sbjct: 326 TNVIFGGDMNWDDKLDGKFPLADKWVDVWEVMKPGDLGFTYDTKANPMLSGNRALQKRLD 385

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---------------LSDHCPISIDYD 303
             +                +        S  K                 SDH  + +   
Sbjct: 386 RILCR---LDDYKLGGIEIVGKEAIPGLSYEKEKKVRGEIKKLELPVLPSDHFGLLLTLS 442


>gi|297160067|gb|ADI09779.1| hypothetical protein SBI_06659 [Streptomyces bingchenggensis BCW-1]
          Length = 298

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 69/282 (24%), Gaps = 49/282 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
           R+ ++N+            + S      D   +          ++ L+E  +G    +  
Sbjct: 59  RVANFNVCN--------PCRGSNPLYHVD--QIVDQIVKYRPQVIGLEEICVGETQRLIG 108

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  + +    +N              A+        + +            +  
Sbjct: 109 KLRAKGYRYYAAHGSQLNTRWGCHEFGSAYGSAILSAAPLTNKVNRHYSQGG-----SEP 163

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  V +   + GKK+ V   HL             S   S+   Q   L   +    +  
Sbjct: 164 RGYVAVDTTVAGKKVRVFATHL-----------AQSGQASVRKVQVGELIKAVRAYPQ-- 210

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--PIDYF 260
              ++ GDFN + N        W      D      +     C   ++ R       DY 
Sbjct: 211 --VIVLGDFNAEPNASEM-SPMWSKFHDADPACSPTQYLR-PCKMTEDSRRPGGKKFDYI 266

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +                              SDH  I  D 
Sbjct: 267 FLRNGGAFSSSSVGV-------------NGNFSDHNLIYADL 295


>gi|118462542|ref|YP_883226.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium 104]
 gi|118163829|gb|ABK64726.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium 104]
          Length = 252

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 68/303 (22%), Gaps = 82/303 (27%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-------- 78
            ++NI          +              LR   + LD D++ LQE+            
Sbjct: 2   ATFNILHGRTVGDGVI-----------VERLRDCIRRLDPDVLSLQEVDCDQPRSEHADL 50

Query: 79  --AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLL 131
             A A+           +       +   +  D         IA+  +      Q   L 
Sbjct: 51  TGAAAEAMGAVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLP 110

Query: 132 GAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                F                 R AV   +     ++ V + HL      +        
Sbjct: 111 RIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANTHLSFVPGWNR------- 163

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                    + L+  I   +    P ++ GD N     +                     
Sbjct: 164 ---------RQLRRLIRDLRGLPGPRLLTGDLNMTPQTVRRWSGMRAL------------ 202

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            +D+ +   +            +             +SDH P+ 
Sbjct: 203 ---GNAKTFPADNPNRQLDHIL-TDDRRLRCAAVQADLMP------------ISDHRPLV 246

Query: 300 IDY 302
           +D 
Sbjct: 247 VDL 249


>gi|152974192|ref|YP_001373709.1| endonuclease/exonuclease/phosphatase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152022944|gb|ABS20714.1| Endonuclease/exonuclease/phosphatase [Bacillus cytotoxicus NVH
           391-98]
          Length = 263

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 88/298 (29%), Gaps = 54/298 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTT-SDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++ N              +  +         L +  +  + D++ LQE+        
Sbjct: 1   MKVLTLN------------CHSWQEENQLEKIKYLAKTIQEENYDVIALQEVSQSIKAQS 48

Query: 83  VFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           V+       F                 ++        +      A+  K+  + + S+ +
Sbjct: 49  VYGNKKKDNFGLILLAELKQLGLENYSMVWDFAHIGYDIYEEGSAIITKHPIIKRGSFFV 108

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             +KD+      R+ V   +   GK I     HL            ++       +Q   
Sbjct: 109 SESKDTTYWK-TRKIVYATIFYQGKNITFYSCHLGW----------WNDEEEPFREQVNR 157

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             + I   + S     + GDFN   +  G   D+    +  D+     ++ +      K 
Sbjct: 158 FMEHIDDHELS----FLMGDFNNNAHLRGEGYDYMIQNNFYDTYALAMEKDEGTTVQGKI 213

Query: 251 LRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      ID  + ++    F  +  F+ +             +SDH  + +  +
Sbjct: 214 AGWDENKQNLRIDLVLSNKPVKVFSSKVIFNGMNRKI---------ISDHFGVEVQLN 262


>gi|288931161|ref|YP_003435221.1| exodeoxyribonuclease III [Ferroglobus placidus DSM 10642]
 gi|288893409|gb|ADC64946.1| exodeoxyribonuclease III [Ferroglobus placidus DSM 10642]
          Length = 253

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 89/305 (29%), Gaps = 80/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N            +  KR    + L+ +       DI+ +QE        + 
Sbjct: 2   LKVCTYNVN------------SIRKRLHIVFPLMEKV------DILCMQE---TKVEDRK 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+  + +         +    S       +A+  K                S       
Sbjct: 41  FPEADFHL-------KGYHVVFSGGKARNGVAIASKFE---------PDEYFSGINGEKD 84

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +         K+WV++++      ++S    Y           + LK+++++  +   
Sbjct: 85  RVIAARF----GKLWVINVYAPQGQSIESEYYRYKLEF------FKKLKEFLSEFVDFKG 134

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
            +++ GD N     +  +                  +K I     +    ++   +    
Sbjct: 135 YYLLCGDMNVAPEDIDVHSPDKLRNHVCFHEDVKKAFKEIVQLGFVDVL-RKHHPKERIY 193

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+ +  +   +              +       + SDH P+
Sbjct: 194 TFYDYRVRDAVKRGLGWRVDHILATEKLAEKSKDCYVLLEYRTTE-------KPSDHVPL 246

Query: 299 SIDYD 303
             +++
Sbjct: 247 VAEFE 251


>gi|255723798|ref|XP_002546828.1| hypothetical protein CTRG_01133 [Candida tropicalis MYA-3404]
 gi|240134719|gb|EER34273.1| hypothetical protein CTRG_01133 [Candida tropicalis MYA-3404]
          Length = 309

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 96/313 (30%), Gaps = 34/313 (10%)

Query: 5   YVLALVFFLVPCTASV----AQKVRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYTLLRQ 59
            +L ++ F V          +    +   N+   + +   S  + +  +R       ++ 
Sbjct: 14  LLLGIILFTVLPLTISEIQGSTDFTIYDHNVRYAASRIKRSSKELSWSERKNGVINAIKS 73

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRK 118
             K+    +V LQE         +   N      +  +     + D      ++ I  ++
Sbjct: 74  ETKDY-PSLVGLQETDLSQLKDILQGLNEDESISNNWKYYGCGRNDGKEKGEYSPILYKE 132

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGN-----RRAVELLV--EINGKKIWVLDIHLKSFCFLD 171
            + +++  S   L                R           +GK +  L+ HL       
Sbjct: 133 SDWKLISGSTKWLSLTPDKPSKYPGADKNRIVTITTFMHRSSGKVVNFLNTHLDH----- 187

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                   S       A  + D+I Q      P  + GDFN K       D    T+  +
Sbjct: 188 -------KSKEAREYSANLISDYIKQ-LPHKFPTFLIGDFNSK-ESDVAYDIISDTMLDS 238

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVM--DQNAYKFLIQESFSEILYNEDDIKSRG 289
             +       +    +    + +  ID+       ++Y  +   S++ I    D+    G
Sbjct: 239 SKVSEIVSGSELDTFSGFGNKKEFNIDFIWSFNSSDSYSTVTPTSYTVI----DNYMENG 294

Query: 290 KRLSDHCPISIDY 302
            R SDH PI   Y
Sbjct: 295 YRFSDHRPIVARY 307


>gi|146298594|ref|YP_001193185.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101]
 gi|146153012|gb|ABQ03866.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101]
          Length = 253

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 82/303 (27%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                 +      ++ +    D++ LQE+ +       
Sbjct: 1   MKIISYNVNGIRA---------------AITKGFIEWLQAASPDVICLQEIKATQD---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +           +    ++ +A+  K           +   D   R    
Sbjct: 42  ---QIPVEAITAAGYPYQYYYPATKKGYSGVAILSKIEPQKVVYGTGIHHMDFEGR---- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++L S   +D                    + +I + K S+ 
Sbjct: 95  -----NLRADFDDVSVMSLYLPSGTNID--------RLDHKFMFMDDFQTYINELKISIP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
             +I GD+N     +  +D                          I   +  +   +   
Sbjct: 142 NLIICGDYNICHEAIDIHDPVRNKTVSGFLPEERAWLDAFMKSGFIDSFRHFNKDPHHYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++       L +        +           SDHCP+ +
Sbjct: 202 WWSYRAGARGNNKGWRIDYNLVSNAIEHRLKRAVILPDAVH-----------SDHCPVLV 250

Query: 301 DYD 303
           + +
Sbjct: 251 EIE 253


>gi|81884455|sp|Q6AXQ5|PDE12_RAT RecName: Full=2',5'-phosphodiesterase 12; Short=2'-PDE; Short=2-PDE
 gi|50927785|gb|AAH79396.1| Phosphodiesterase 12 [Rattus norvegicus]
 gi|149015723|gb|EDL75071.1| similar to CG31759-PA [Rattus norvegicus]
          Length = 608

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 79/314 (25%), Gaps = 33/314 (10%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + P           R+  H    +        +  +             L  + 
Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413

Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQW- 190
               A N  A E +++ +   +I VL     S    C  ++    +     +   Q    
Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMAAA 473

Query: 191 --LKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236
                 ++      +P +  GDFN   +               + D      +    +  
Sbjct: 474 LVHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSVPEDHEDWASNGEEERCGMSL 533

Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290
               K           N        +DY  +D        +    S              
Sbjct: 534 THCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVS 593

Query: 291 RLSDHCPISIDYDF 304
             SDH  +  D  +
Sbjct: 594 HPSDHIALVCDLKW 607


>gi|84500676|ref|ZP_00998925.1| exodeoxyribonuclease III, putative [Oceanicola batsensis HTCC2597]
 gi|84391629|gb|EAQ03961.1| exodeoxyribonuclease III, putative [Oceanicola batsensis HTCC2597]
          Length = 262

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/308 (9%), Positives = 72/308 (23%), Gaps = 75/308 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
              L +WNIN                       L+ ++ +    D++ LQE  S      
Sbjct: 2   PFTLATWNIN----------------SVRLREPLVLRFLQEEAPDVLCLQECKSPVDKIP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F    +                     +  +A+  K                +    
Sbjct: 46  REAFSDLGYTHMI-----------ARGQKGYNGVAILSKMPIEDVGDRDFAALGHARH-- 92

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +   +E     + + + ++ +    D  +   +            ++DW   ++ 
Sbjct: 93  -----IAGRLENG---VTIHNFYVPAG--GDKPDREVNVKFGQKLDYLTGMRDWFHAERP 142

Query: 201 SLVPFVIAGDFNRKINYLGN--NDDFWKTID-------------PNDSLIRFPKEKDSRC 245
                V+ GD N          +    + +                   +   ++   + 
Sbjct: 143 EKA--VLVGDLNIAPREDDVWNHKQLLRIVSHTPIEVEHLGQTQDAGKWVDITRKDIPQG 200

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           N       +            +D+     +                        ++ SDH
Sbjct: 201 NLYSWWSYRSPDWDAADKGRRLDHVWATPDIANAGHSS-------RILRHIRGYEQPSDH 253

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 254 APVLATFD 261


>gi|224477773|ref|YP_002635379.1| hypothetical protein Sca_2291 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422380|emb|CAL29194.1| hypothetical protein SCA_2291 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 228

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 66/222 (29%), Gaps = 33/222 (14%)

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQ------------------SYPLLGAKDSFSRAG 141
           N        +I          V+   +                    P     ++ +   
Sbjct: 2   NKDGGQPGANIRVGFLYNPNRVQFDSKIKPGDANTAVSYQKGNLTRNPGRIDPNNPAFID 61

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ 197
           +R+ +    +  GK++  +  H  S    D+L     P    S     + A+ +  ++TQ
Sbjct: 62  SRKPLAAQFKFRGKQVIAIANHWNSKNGDDALFGKNQPVNLGSEKQRVEIAKAVSRFVTQ 121

Query: 198 KK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            K        V  GDFN             KT++ N           +   +     N  
Sbjct: 122 VKQDNPKANIVALGDFNDFQWSQP-----LKTLEGNQMTDLVNSVPQNERYSYVYQGNSQ 176

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            +D+ V+  N        S  ++++   D      R SDH P
Sbjct: 177 SLDHVVVSNNLA----PHSKLDMVHVNSDFTDMSGRASDHDP 214


>gi|237786239|ref|YP_002906944.1| exodeoxyribonuclease III [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759151|gb|ACR18401.1| exodeoxyribonuclease III [Corynebacterium kroppenstedtii DSM 44385]
          Length = 262

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 76/300 (25%), Gaps = 60/300 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +    +       D D++ +QE          
Sbjct: 1   MRLATWNVN----------------SVRTRLPRIIDVLNRHDIDVLAMQETKCSED---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +    S  +    +A+  +       + P          A   
Sbjct: 41  ------QFPRDAFTDAGYEVAVSGTNQWNGVAIASRVGLTDVHTLPHQPGFSKELTAEQ- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +      I V+ +++ +   + ++  TY        +    ++++     ++  
Sbjct: 94  AIEPRSIAATCGGIIVMSLYIPNGREISNIHFTYK------LRFLDAVRNYAATAVDNDP 147

Query: 204 --PFVIAGDFNRKINYLGNNDDFW------------KTIDP--NDSLIRFPKEKDSRCNA 247
                + GD+N   +     D  +              +    ++               
Sbjct: 148 ELRLALVGDWNIAPHDTDVWDPQFFVGHTQVTPRERNALTALEDEGFTDVTHNSGYTYWD 207

Query: 248 NKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               R      + ID         +   + S           +   K  SDH P+ +DYD
Sbjct: 208 YTAGRFGRNQGMRIDVQWASPALAENAGEVSV-------YKDERAAKGSSDHAPLIVDYD 260


>gi|227550110|ref|ZP_03980159.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX1330]
 gi|227180754|gb|EEI61726.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX1330]
          Length = 293

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 83/310 (26%), Gaps = 66/310 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++ N +  L E+                   + Q   +   D++ LQE+       +
Sbjct: 20  MKIMTLNTHSWLEEEP------------QEKLKQIAQKICHEQYDVIALQEVNQTMDAKR 67

Query: 83  V----------------FPKNTWCIFY--------STERLINHSKRDSNNDIHTAIAVRK 118
           +                   + +             T                   A+  
Sbjct: 68  LTSEQLKNFSQVQEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLS 127

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K    L     L+           R+ +     +  + I V   H   +    S      
Sbjct: 128 KQP--LTSQTHLVSETKEKEDYHTRKILVGQTSVKTQCITVASCHFSWWVDEKSG----- 180

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                 + + + L+  +        P  + GDFN      G +      +   D+     
Sbjct: 181 -----FAFEWKELEASL---APLTTPLYLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQ 232

Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           K++         +  +N +  + IDY  + Q+ +            Y        G  +S
Sbjct: 233 KKQAEATIEKRIDGWENNKEGLRIDYIYVPQDCF---------VTSYQRIFDGENGPIVS 283

Query: 294 DHCPISIDYD 303
           DH  +++  +
Sbjct: 284 DHYGVAVTLE 293


>gi|150866588|ref|XP_001386237.2| hypothetical protein PICST_49245 [Scheffersomyces stipitis CBS
           6054]
 gi|149387844|gb|ABN68208.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 318

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 80/308 (25%), Gaps = 43/308 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             R+ S N+     +  V   +   KR       +  +       IV LQE+  +     
Sbjct: 22  TFRIYSHNVKNGGHKALVPGEEPWTKRFRKITASI--HFNAQRDSIVCLQEVYKFQLNDI 79

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD------S 136
           +   N +      +                 I  ++    ++      L  K+       
Sbjct: 80  MKELNRYSPNEDWKYYGVGRIDGMELGEFVPIIYKESEWELVFSDSLWLNEKNTRSSLTG 139

Query: 137 FSRAGNRRAVELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +     R    + ++  G +  I V + HL         E +   S  L+ Q  + +  W
Sbjct: 140 WDAQYPRIVSYVTMKHKGSENYINVFNTHL-----DHVGEKSKIGSVKLIGQTMKSINSW 194

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252
                    P  + GDFN + +            D +     F +    + +        
Sbjct: 195 ---------PSFLCGDFNTEPDDAAFKQLEESFSDVSTLSTPFNRYGHEKSSVTGFEGEV 245

Query: 253 ---NKIPIDYFV---MDQNAYKFLIQESFSEILYNEDDIKS-----------RGKRLSDH 295
                  IDY                +S                         G  +SDH
Sbjct: 246 LLQGGQSIDYIFAPKYTAKMSDKPQCDSIDVNSAANKLFLRLQGFGMLHSKFGGSYMSDH 305

Query: 296 CPISIDYD 303
            PI  D+ 
Sbjct: 306 RPIVADFS 313


>gi|1487952|emb|CAA59746.1| ANGEL 39 [Drosophila melanogaster]
          Length = 354

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 80/303 (26%), Gaps = 29/303 (9%)

Query: 18  ASVAQKVRLVSWNI-------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
                  ++VS+NI         L    G+     S          L +    LD DI+ 
Sbjct: 62  PHKCSSFKVVSYNILAQDLLLEHLFLYVGIPHEFLS---WQRRQQNLLRELLKLDPDILC 118

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQEM   +    V                  +   ++     AI        +L      
Sbjct: 119 LQEMQFDHLPVLVQRLRMGNGKKLAYVYKKKTGCRTDG---CAIVYDSSKFELLDHQAVE 175

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L  +       +  A+        ++        K F    +     +    +   Q + 
Sbjct: 176 LYDQAVALLNRDNVALFARFRFKKQQ-----EQQKEFVVATTHLLFNTKRSDVRCAQVER 230

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL---IRFPKEKDSRCNA 247
           + + +     +  P V+ GDFN   +         K  D + +        +  DS    
Sbjct: 231 ILEELQSF-STDTPIVLTGDFNSLPDSSPIEFLVGKNGDVDSTACPEPLHFEIIDSGEGT 289

Query: 248 NKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSDHCPISI 300
               +N+  I DY +    +         S       +           +  SDH  +  
Sbjct: 290 ASTYQNEWVIVDYILRSLGSRSRHKLLPLSVYSLPSINRCIGAGQIPNYRLGSDHYALGA 349

Query: 301 DYD 303
            + 
Sbjct: 350 VFT 352


>gi|331265838|ref|YP_004325468.1| exodeoxyribonuclease III [Streptococcus oralis Uo5]
 gi|326682510|emb|CBZ00127.1| exodeoxyribonuclease III [Streptococcus oralis Uo5]
          Length = 275

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHLEILEELFQGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +        +         ++    L        +   
Sbjct: 114 I-----ITLEFDTFFVTQVYTPNAGDGLKRLDERQVWDVKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPECY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIE 274


>gi|326495490|dbj|BAJ85841.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 460

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 92/351 (26%), Gaps = 83/351 (23%)

Query: 16  CTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFL 71
            + S +    ++S+NI   N       + L       R  S   L+    ++ D+D+V L
Sbjct: 83  ASTSGSDACTIMSYNILADNNARNHPDLYLDVPWDALRWDSRRRLIIHEIRHWDSDLVCL 142

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+  +  +A       +   +          R  +     A   + + +R+L++     
Sbjct: 143 QEVDRFREIAAEMKSKGYECSF--------KGRTGDAKDGCATFWKSERLRLLEEDSIDF 194

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                     N  A  L+ E+NG + +VL          +           +   Q + L
Sbjct: 195 SE----FNLRNNVAQVLVFELNGTQKFVL---------GNIHVLFNPKRGDVKMGQIRML 241

Query: 192 KDWITQKKES--LVPFVIAGDF-------------------------------------- 211
            +           +P V+AGDF                                      
Sbjct: 242 LERANALAGKWDGIPIVLAGDFNSTPESAIYKFLSTMKLNVSLHDRRQLSGLDSSEFGLY 301

Query: 212 ----NRKINYLGNNDDFWKTIDPNDSLIR--------------FPKEKDSRCNANKNLRN 253
               N + +     +    +                                  + + + 
Sbjct: 302 CSLLNFEWSDEEVRNATGSSNVMVARHPLKLSSSYAMLKGNSSNRGHHGEPLATSYHKKF 361

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +DY           + ++               +  SDH PI  ++ F
Sbjct: 362 LGTVDYLWYTPGLECSRVLDTLPVDALKRTRGLPTREMGSDHLPIVAEFIF 412


>gi|313679171|ref|YP_004056910.1| endonuclease/exonuclease/phosphatase [Oceanithermus profundus DSM
           14977]
 gi|313151886|gb|ADR35737.1| Endonuclease/exonuclease/phosphatase [Oceanithermus profundus DSM
           14977]
          Length = 353

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 88/317 (27%), Gaps = 61/317 (19%)

Query: 24  VRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           + L++WNI               G   W    +        +  + K+  AD+V +QE+ 
Sbjct: 56  LSLLTWNIGYAGLGAEQDFFLDGGTHGWPGRAE-VERYLAGIAAHLKDRPADVVLIQEVD 114

Query: 76  --------SYNAVAKVFPKNTWCIFYSTER---LINHSKRDSNNDIHTAIAVRKKNVRVL 124
                      A+A       +    +       +          + + +    +     
Sbjct: 115 LASRRSYGINEALALARALPDYAFVLAKNYDVAFVPVPVARPMGRVKSGLMTLSRWRPAA 174

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF--CFLDSLENTYSPSCS 182
            + + L G          R    + +    +   +            + +  N+   +  
Sbjct: 175 AERHALPG----------RYGFLVQLVQLDRAFVLTRYPAADGRDWVVINTHNSAFDAGQ 224

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           L  QQ  ++K+ +T++       V+ GD+N  +  +  +  F  +       + FP++  
Sbjct: 225 LREQQLGYIKEVMTREYARGNYVVVGGDWNLILPGVDPDAAFAHSEPRPGFYLPFPEDWT 284

Query: 243 SRCNANKNL-----------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                                          ID F++  N     +              
Sbjct: 285 PAGWTWAYDARTPTNRSVSRPWRPGENYVTVIDGFLVSPNVEVQEV------------RT 332

Query: 286 KSRGKRLSDHCPISIDY 302
           +  G   SDH P+ +  
Sbjct: 333 EDLGFASSDHNPVRVRL 349


>gi|312882321|ref|ZP_07742065.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370034|gb|EFP97542.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 430

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 91/296 (30%), Gaps = 33/296 (11%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               S    + ++S+N   LS        ++S         L+ +  +N   D+VF+QE+
Sbjct: 156 SSVESQENTIDIISYNTWMLSHIGQKMETRDS---------LIAKEVRNH--DVVFMQEV 204

Query: 75  GSYNAVAKVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  ++      +  + S +     S           +    K   V Q  +     
Sbjct: 205 FRSENEKEIKSTMGDYFNYTSDKLNGGGSNTYDG-----GVITFSKYPIVEQNQHVFDNC 259

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           K +   A  +  +   +  + +   + ++HL S+               +   Q   +  
Sbjct: 260 KGTDCAAD-KGVLYTKIVKDNQNYHLFNLHLGSW--------DTQQHRDVRILQLGEIFV 310

Query: 194 WITQ-KKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDS----LIRFPKEKDSRCNA 247
           ++         P +I GDFN  K  +  +     + +  +D      + +  +       
Sbjct: 311 FMQSLNLPDDEPIIIGGDFNINKHKFPLDYMQMLRILGVSDPELIGELIYSYDPLLNNFF 370

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +   +   DY +   N            +  + D        LSDH  I+ ++ 
Sbjct: 371 TPSEEGRERFDYLLYVDNGAILDSNSQIKAL-RSFDQSIWGTWDLSDHFAINANFT 425


>gi|149914631|ref|ZP_01903161.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. AzwK-3b]
 gi|149811424|gb|EDM71259.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. AzwK-3b]
          Length = 210

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 60/244 (24%), Gaps = 44/244 (18%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +    L AD+V LQE+    A       +          L       S      A+ VR 
Sbjct: 2   RVINALQADVVVLQEVDKRLAPRPAALPHDMVEEEGWHILPFGQPGGSLGWHGNAMLVRD 61

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
               +      L G          R A+   ++     + V+ +HL              
Sbjct: 62  GVQAIETAHIELPGL-------EPRGAIRADLDTPIGALRVIGLHLGLV----------- 103

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   Q   +   + Q     +P V AGDFN   N           +     L    
Sbjct: 104 --RRYRLLQLGAINRALRQLPP--MPTVFAGDFNEWGNGA----ALDAAVKLVRFLPAAA 155

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                   +    R   P+D   +  +                           SDH P+
Sbjct: 156 --------SYPAPRPVAPLDRIALSPDLLALSSGV----------HRGRPAHIASDHLPV 197

Query: 299 SIDY 302
             D 
Sbjct: 198 WADL 201


>gi|313887924|ref|ZP_07821603.1| exodeoxyribonuclease III [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846090|gb|EFR33472.1| exodeoxyribonuclease III [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 275

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 76/305 (24%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWNI++++        +  + R       +       D DI+ +QE          
Sbjct: 1   MKIISWNIDSINAALTSDSNRAQMSR------EVLATILREDPDIIAIQETKLPKGGPSK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K      ++    +  S  +     +       K       ++P + A D+    G  
Sbjct: 55  KHKEILAEMFADYDYVFVSSEEPARKGYAGNMAFFKKGLEPTVTFPKIDAPDTMDFEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     ++  ++  +                   +    L +          
Sbjct: 114 -----IITLEFDDFFLTQVYTPNAGGELKRLPLRQIWDEKYGEYLSSLDEI--------K 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                           +  +        F           
Sbjct: 161 PVIATGDFNVAHKEIDLANPDGNRMSAGFTDEERQGFTNLLDRGFTDTFRHIHGDVEGVF 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDYF++       +      +    +           DH PI
Sbjct: 221 TWWAQRVKTSKINNSGWRIDYFIVSDRIKDLVKDSKMIDSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            +D +
Sbjct: 270 LLDIN 274


>gi|221056961|ref|XP_002259618.1| endonuclease [Plasmodium knowlesi strain H]
 gi|193809690|emb|CAQ40391.1| endonuclease, putative [Plasmodium knowlesi strain H]
          Length = 2507

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/381 (10%), Positives = 96/381 (25%), Gaps = 91/381 (23%)

Query: 15   PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
               ++V  +  +++WN+        E        +   +   T + Q   N   DI+ LQ
Sbjct: 2124 STVSNVNNQFTIMTWNVLAEIYGTIEAFPHCDPYMLAWSYRKTKIIQEILNNSPDIICLQ 2183

Query: 73   EMGSYNAVAKVFPKNTWCIFYSTERLI---------NHSKRDSNNDIHTAIAVRKKNVRV 123
            E+ + + +    P      +    +              +         AI   KK ++ 
Sbjct: 2184 EIQNEHFLDFFKPSLGELGYEGVYKQKTKEIFTSPSGKRRGGKYTIDGCAIFYNKKKLKF 2243

Query: 124  LQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVLDIHLKSFCF------- 169
            ++            +             ++   +  +   + +L  +++ +         
Sbjct: 2244 VETYALEFSKLIKEASVFTLPKEVQKNPSLVKRLLKDNVALVILLEYIQQYSKMYDSKEE 2303

Query: 170  ------------LDSLENTYSPSCSLLSQQAQWLKDWIT-------QKKESLVPFVIAGD 210
                         ++       +  +   QAQ L   +        +K E++   +I GD
Sbjct: 2304 GVEKPNKNLIIVANTHIVANPEANYVKIWQAQILVKVVEYLRINFIKKYETIPSLIICGD 2363

Query: 211  FNRKINYLGNNDDFWKTIDP------NDSLIRFPKEKDS--------------------- 243
            FN   +       + KT         +D                                
Sbjct: 2364 FNSTPSSAVYQLIYKKTCSRSHEDFSSDKYSLLTDLPLGHNLNLKSAYAISKLLSQKLNP 2423

Query: 244  -----------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-- 290
                           N        +DY   +      +   + ++      +        
Sbjct: 2424 EEYSSKMEIFEPLFTNYTGNFIGCLDYIFYNDENLNIISTVNIADENQLMQEAHIYQLSN 2483

Query: 291  -------RLSDHCPISIDYDF 304
                   R SDH P+   ++F
Sbjct: 2484 CALPSPIRPSDHLPLIAKFEF 2504


>gi|134093450|ref|YP_001098525.1| putative nuclease [Herminiimonas arsenicoxydans]
 gi|133737353|emb|CAL60396.1| Putative Nuclease [Herminiimonas arsenicoxydans]
          Length = 259

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 76/308 (24%), Gaps = 80/308 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           +++VS N+N +        +               Q+     AD + +QE+ +  A    
Sbjct: 2   LKIVSANLNGIRSAAKKGFF---------------QWMARHSADYICVQELKAQEADMTP 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +  ++       +S                            +G       A 
Sbjct: 47  DFLTPEGYFGYFHYAEKKGYSGAGVYCKTKPDNV--------------QIGFNCPEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V+ +   + V+ ++  S    +  +        +       L       K  
Sbjct: 93  GRY-----VQCDFGNLSVISVYCPSGSSGEERQQAKFRFMDVFLPHLLEL-------KSQ 140

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              FVI GD+N   N                     +   +  D    +  + +      
Sbjct: 141 GREFVICGDWNIAHNEIDLKNYKGNRKNSGFLPEEREWLTRVFDEVGLVDVYRRLHPGTT 200

Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   N+           IDY V   +                      + +R SDH
Sbjct: 201 EECYTWWSNRGQAYAKNVGWRIDYQVATPSLAARAHAAEI-----------YKVERFSDH 249

Query: 296 CPISIDYD 303
            P++I Y 
Sbjct: 250 APLTITYT 257


>gi|313891277|ref|ZP_07824895.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120344|gb|EFR43465.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus SPIN 20026]
          Length = 275

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 82/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +     + DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVIDRLVSEDADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               T   ++     +  S  +     +       K       ++P +GA  +    G  
Sbjct: 55  KHLETILSYFPNYLHVWRSSVEPARKGYAGTMFLYKQTLNPVVTFPEIGAPTTMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +V  ++  +                  +     L        ++  
Sbjct: 114 -----IITLEFEDFFVTQVYTPNAGDGLRRLADRQEWDIKYADYLTQL--------DAQK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N                           +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSAGFTDEERAGFTALLEKGFTDTFRHLHGDLPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +++    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKMNNTGWRIDYWLTSNRIADKVLKSEMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 LLEID 274


>gi|254459775|ref|ZP_05073191.1| endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium
           HTCC2083]
 gi|206676364|gb|EDZ40851.1| endonuclease/exonuclease/phosphatase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 329

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 83/314 (26%), Gaps = 49/314 (15%)

Query: 39  GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
                     +       L    + +DAD + + E    +                  R 
Sbjct: 17  DTCWSGRRGVKRADQAKALGHVFQRIDADAIMVIEAPDDHQHRSGTRALENFAKAYDLRS 76

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA------------------ 140
                  +N      IA+     ++     P+    D                       
Sbjct: 77  SKALIGFTNTTQQE-IALLYDPTKLTATHDPIGALGDPVPPFNETYQIDLDIDNRADSVR 135

Query: 141 GNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSL-----ENTYSPSCSLLSQQAQWLKDW 194
            ++  +EL +E   G  + ++  HLKS     +            +      QA WL+  
Sbjct: 136 FSKPPLELAIETAAGNNLRMIGAHLKSKAPHGAHNAAEVMRFSIANRRKQLAQAVWLRAR 195

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------------TIDPNDSLIRFPKE 240
           + +  ++    ++ GD N         + F +                DP+ +     K 
Sbjct: 196 VEEHLDAGEALMVLGDLNDGPGLDEYENLFGRSSVEIILGEIGCPCLYDPHAARALKRKI 255

Query: 241 KDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291
                 +   L+         +DY ++  +               + +       R    
Sbjct: 256 GGEPTTSRFFLKKDNRYLQALLDYIMVSDDLRYKAKTWRIWHPFDDPECWVDLKLRDALL 315

Query: 292 -LSDHCPISIDYDF 304
             SDH P+++D DF
Sbjct: 316 TASDHFPVTLDLDF 329


>gi|262274349|ref|ZP_06052160.1| hypothetical protein VHA_001324 [Grimontia hollisae CIP 101886]
 gi|262220912|gb|EEY72226.1| hypothetical protein VHA_001324 [Grimontia hollisae CIP 101886]
          Length = 361

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 91/352 (25%), Gaps = 74/352 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82
           +R  ++N+   S      +++     T   Y  +    +++  D++ L E          
Sbjct: 8   LRFATFNVAM-SADAPGDIFRELKAGTHRRYAHIAAIIQHIQPDVLLLCEFDHPGQGGDD 66

Query: 83  VFPKNTWCIFYSTERLINHSKRDSN------------------------------NDIHT 112
                    +    R    +                                   +    
Sbjct: 67  GMLAYFQQAYLEKPRCGQPAIHYPFQYAPPTNTGLAVCNGEDVATLPERAHGFGRHHGQY 126

Query: 113 AIAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNRR----------------AVELLVEING 154
              V  +    L+  +S+  LG          R                  + L V ++ 
Sbjct: 127 GFVVLSRYPLDLENLRSWQTLGWASYPDSKMPRAYFAGKGLGSLRLSSKNHIALPVIVHD 186

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKE------SLVPFV 206
           K I ++  H     F  + +  Y  +   L      ++  D++              PFV
Sbjct: 187 KVIQLVACHPTPPVFDGTEKRNYKRNADELRLLHDIVRGADFLVDDAGKAGGLTPSQPFV 246

Query: 207 IAGDFNRKI-NYLGNNDDFWKTIDPN---------DSLIRFPKEKDSRCNANKNLRNKIP 256
           + GD N    N  G+++   + +D           D          +R          + 
Sbjct: 247 VMGDLNADPVNGDGDHNAIRQLLDDAKIQDVKPESDGAEAALLHAHTRRKRQATHHRGLR 306

Query: 257 IDYFVMD------QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +DY +             +   ++    L +     +     SDH  + +D 
Sbjct: 307 LDYVLPSIHFNVLDAGVFWPNPDNLLGHLIHNHKGNAVASHSSDHRLVWVDL 358


>gi|49083150|gb|AAT50960.1| PA5488 [synthetic construct]
          Length = 293

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 79/294 (26%), Gaps = 62/294 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +         ++   + +     D D+V L
Sbjct: 30  PDDGRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLA--DYDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSY 128
           QE    +  +    +                   +   I      +  R +   +     
Sbjct: 88  QEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIAQHSNGLLSRWRPTLLEDHPL 147

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           P             R A+ +        + V+ +HL                    ++Q 
Sbjct: 148 PGPPG---------RGAIFVRFGEGADALVVVMMHLALG-------------ARTRTRQL 185

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            ++++ I          V+ GD N               +  N  L              
Sbjct: 186 AYIRELIGDY----RHQVLMGDMNTHAVD----------LLENSPLRDLGLMAPQVEATF 231

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + R +  +D+ ++  +     +                  + +SDH P+S++ 
Sbjct: 232 PSWRPQRNLDHILLSSDLALERVDV--------------LDQPISDHLPVSVEI 271


>gi|294657164|ref|XP_459475.2| DEHA2E03454p [Debaryomyces hansenii CBS767]
 gi|199432491|emb|CAG87693.2| DEHA2E03454p [Debaryomyces hansenii]
          Length = 618

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 87/315 (27%), Gaps = 47/315 (14%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
                R+ S N+        VS  +   +R  +  T +          IV LQE+  +  
Sbjct: 314 QPLNFRVYSHNVKNGGHDILVSGERTWAERVNNIATSIA--FNARHDTIVALQEVYKFQL 371

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKKNVRVLQQSYPLLGAKDS- 136
              +   N +      E     + R    +I     I  +     ++      L  KD  
Sbjct: 372 DNILSELNRYSPPNKPEWAAYGAGRIDGRNIGEFVPILYKTSEWELVFSDTMWLNDKDPR 431

Query: 137 -----FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                +     R    + ++ + +     ++      F    E +   S S++ Q+   +
Sbjct: 432 VSLEGWDAKYLRICSYVTLK-HKRTENYFNVFNTH--FDHVGELSRIGSASMIVQKMNEI 488

Query: 192 KDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             W         P +  GD N +           +  D  K     +      K   +  
Sbjct: 489 NKW---------PSIFCGDLNAEPKERTYQLITEDYKDVSKLTTAFNRY-GHTKSSVTGF 538

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS-----------------R 288
                L+    IDY          + QE   +     +D                     
Sbjct: 539 EGEVLLQGGQNIDYIFA-PGYTTKVSQEDDCDKQSTPEDSPDANLSLKLQAFAMLHSKFN 597

Query: 289 GKRLSDHCPISIDYD 303
           G  +SDH P+  D+ 
Sbjct: 598 GAYMSDHRPLVADFT 612


>gi|60729594|pir||JC7951 deoxyribonuclease I (EC 3.1.21.1) - common carp
          Length = 279

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 94/307 (30%), Gaps = 36/307 (11%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            K + A+   LV     +   + + ++NI +           +S     +   ++ +   
Sbjct: 1   MKIITAIGLLLVSV--HLGHSLLIGAFNIKSFG---------DSKASNATLLDIITKVVH 49

Query: 63  NLDADIVFLQEMGSYN--AVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               DIV +QE+   +  A  K+    N     Y  + +++     S          R+ 
Sbjct: 50  RY--DIVLIQEVRDSDLTATNKLMQSVNGGSSPYEYQYIVSEPLGRSTYKERYLFIYRRP 107

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            V V        G +   +   NR    ++   N        +  +              
Sbjct: 108 AVSVANSFQYDDGCESCGTDTFNREPFVVMFSSNTAVQQKFALVPQHTSP---------- 157

Query: 180 SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
              +   +   L D +   ++  +    ++ GDFN   +Y+ N+D     +  + S    
Sbjct: 158 --EVAVTEIDALHDVVLDTRQRLNTNNIMLLGDFNAGCSYVSNSDWSKIRLRTDQSYTWL 215

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295
             +       + N       D  V   +  K +   S     + +    S+   L  SDH
Sbjct: 216 IPDSADTTVTHTNCPY----DRIVATSDMMKGVSAGSAQVFDFMQAHGLSQSWGLAVSDH 271

Query: 296 CPISIDY 302
            P  +  
Sbjct: 272 FPAEVQL 278


>gi|70993420|ref|XP_751557.1| transcription factor [Aspergillus fumigatus Af293]
 gi|74671761|sp|Q4WQG5|CCR4_ASPFU RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|66849191|gb|EAL89519.1| transcription factor, putative [Aspergillus fumigatus Af293]
          Length = 696

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/361 (11%), Positives = 90/361 (24%), Gaps = 72/361 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             +     KV ++S+N    S   Q         V        L+    ++ D+DI+ LQ
Sbjct: 318 SSSNHRTDKVTVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILNELRSHDSDIICLQ 377

Query: 73  EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           E+     +     ++   +   +++   R +   + D+      A   +     +L +  
Sbjct: 378 EIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKGSKFILLDKQL 437

Query: 129 PLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKS------- 166
              G             D ++R   +  + ++V       G +  V++ HL         
Sbjct: 438 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGARFIVVNAHLYWDPAFKDV 497

Query: 167 -----------------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                                   C   +            +   +     +       +
Sbjct: 498 KLIQTAILMEELTKLSETYAKWPPCTDKAAFRFSKEEGQSETPPLEEPAPSMQYASGDQI 557

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC--- 245
           P ++ GD N        N                  +  +        F  +        
Sbjct: 558 PLLMCGDLNSSPGSAAYNLIAHGRLDEEHPDLEKRLYGNLSKVGMTHPFKLKSAYGAIGE 617

Query: 246 --NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N     K  +DY      + +   +     +               SDH  +  ++
Sbjct: 618 LPFTNYTPDFKDILDYIWYSSNSLHVSALLGEVDKDYLQRVPGFPNYHFPSDHIALLAEF 677

Query: 303 D 303
            
Sbjct: 678 T 678


>gi|22331849|ref|NP_191415.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|75248588|sp|Q8W0Z9|CCR4A_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 1;
           Short=CCR4 homolog 1
 gi|18087604|gb|AAL58932.1|AF462845_1 AT3g58560/F14P22_150 [Arabidopsis thaliana]
 gi|22137046|gb|AAM91368.1| At3g58560/F14P22_150 [Arabidopsis thaliana]
 gi|332646278|gb|AEE79799.1| carbon catabolite repressor protein 4-like 1 [Arabidopsis thaliana]
          Length = 602

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/349 (12%), Positives = 86/349 (24%), Gaps = 64/349 (18%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                   ++S+NI  +T +  +  S         T     L +      ADIV LQE+ 
Sbjct: 242 PLSMGTFTVLSYNILSDTYASSDIYSYCPTWALAWTYRRQNLLREIVKYRADIVCLQEVQ 301

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           + +      P+     +    +   +     N +     A   +  R        +    
Sbjct: 302 NDHFEEFFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHVKKYEVEFNK 361

Query: 136 --------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY---------- 177
                       +  + A+  LV+ N   I VL+    S    +  +             
Sbjct: 362 AAQSLTEAIIPVSQKKNALNRLVKDNVALIVVLEAKFGSQAADNPGKRQLLCVANTHVNV 421

Query: 178 -SPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNN------------DD 223
                 +   Q   L   + +    + +P ++ GDFN       +             D 
Sbjct: 422 PHELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTVPASAPHTLLAVGKVDPLHPDL 481

Query: 224 FWKTIDPNDSLIRFPKEKD-----------------------------SRCNANKNLRNK 254
               +       +   +                                    N      
Sbjct: 482 MVDPLGILRPHSKLTHQLPLVSAYSQFAKMGGNVITEQQRRRLDPASSEPLFTNCTRDFI 541

Query: 255 IPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +DY     +      + E   E    +D      +  SDH  +  ++
Sbjct: 542 GTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 590


>gi|17137276|ref|NP_477204.1| angel [Drosophila melanogaster]
 gi|17366486|sp|Q24239|ANGEL_DROME RecName: Full=Protein angel; AltName: Full=Angel 39; Short=ANG39
 gi|7291622|gb|AAF47045.1| angel [Drosophila melanogaster]
 gi|16182602|gb|AAL13530.1| GH06351p [Drosophila melanogaster]
 gi|220944986|gb|ACL85036.1| angel-PA [synthetic construct]
 gi|220954812|gb|ACL89949.1| angel-PA [synthetic construct]
          Length = 354

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 80/303 (26%), Gaps = 29/303 (9%)

Query: 18  ASVAQKVRLVSWNI-------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
                  ++VS+NI         L    G+     S          L +    LD DI+ 
Sbjct: 62  PHKCSSFKVVSYNILAQDLLLEHLFLYVGIPHEFLS---WQRRQQNLLRELLKLDPDILC 118

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQEM   +    V                  +   ++     AI        +L      
Sbjct: 119 LQEMQFDHLPVLVQRLRMGNGKKLAYVYKKKTGCRTDG---CAIVYDSSKFELLDHQAVE 175

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L  +       +  A+        ++        K F    +     +    +   Q + 
Sbjct: 176 LYDQAVALLNRDNVALFARFRFKKQQ-----EQQKEFVVATTHLLFNTKRSDVRCAQVER 230

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL---IRFPKEKDSRCNA 247
           + + +     +  P V+ GDFN   +         K  D + +        +  DS    
Sbjct: 231 ILEELQSF-STDTPIVLTGDFNSLPDSSPIEFLVGKNGDVDSTACPEPLHFEIIDSGEGT 289

Query: 248 NKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSDHCPISI 300
               +N+  I DY +    +         S       +           +  SDH  +  
Sbjct: 290 ASTYQNEWVIVDYILRSLGSRSRHKLLPLSVYSLPSINRCIGAGQIPNYRLGSDHYALGA 349

Query: 301 DYD 303
            + 
Sbjct: 350 VFT 352


>gi|294643629|ref|ZP_06721431.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294808048|ref|ZP_06766821.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|292641006|gb|EFF59222.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294444689|gb|EFG13383.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 297

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 79/337 (23%), Gaps = 75/337 (22%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ-----------------------------KVRLVSWNI 31
           M +  +  L+ F+    AS  +                              +R+ ++N+
Sbjct: 1   MKKIVIYTLITFIFSVFASSCEDNKDNSLYYPDFTWDTGDGEEDEDPVTETSMRVATYNL 60

Query: 32  NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYNAVAKVFPKN 87
                         +    T+    + Q  ++ D +I   +E      SY          
Sbjct: 61  Q-----------VETGTGWTNRRERVAQLIRDYDFEICGFEEASWEQRSYLGTQLASDYQ 109

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
                  T    N +   S      +        R      P + +         R  V 
Sbjct: 110 ILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDETNFKRFCVW 169

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
              + +  +              ++                Q L D ++ K +   P   
Sbjct: 170 GKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVSDKAKDNTPAFC 218

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
            GDFN   +         +          + +              K  ID+  +     
Sbjct: 219 TGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTRIDFIFV----- 270

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302
                +  + +             LSDH P  I ++ 
Sbjct: 271 -----KHATVLSTRTIVSS-----LSDHYPMVIVVEI 297


>gi|254504971|ref|ZP_05117122.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
           DFL-11]
 gi|222441042|gb|EEE47721.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
           DFL-11]
          Length = 361

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 86/294 (29%), Gaps = 48/294 (16%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +  ++   +++++VS N+  L   + V                L  Y K  D DI+  QE
Sbjct: 103 LLTSSGDTREIKIVSINLEALFLGDLV----------------LTGYLKEADPDIIVFQE 146

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             +   + K                +        +     I  R           P +  
Sbjct: 147 --TLWNLQKWRWHQRGLPIGGPNTSVYPEHLLVGDLGELVIFSRFPIEDTSSLVIPGVTP 204

Query: 134 KD-SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              S     +R  +   + I G+ + ++ +H  S       +N  +    + +  A+ L 
Sbjct: 205 PGASVHYNADREILSFSINIEGQTVDLVSVHSDSPRTARRWQNKRAYFDKMDAVIAERL- 263

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                 +    P +  GD+N           F ++++ ND    +P           + R
Sbjct: 264 ------ESDATPLIAIGDWNSAPWSAR----FQRSLEANDLATAYPDGIPQVTRYFFDYR 313

Query: 253 NKIPI----DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +  +    D   + ++     +                     SDH P+ +  
Sbjct: 314 LRWILGSPVDQVAVSKDIGIVDVSLGPHI--------------GSDHRPLLVTL 353


>gi|222152632|ref|YP_002561807.1| exodeoxyribonuclease [Streptococcus uberis 0140J]
 gi|222113443|emb|CAR41130.1| exodeoxyribonuclease [Streptococcus uberis 0140J]
          Length = 275

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       D DI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVTEDPDILAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++     +  S  +     +       +N      ++P +GA D     G  
Sbjct: 55  KHMEILLSYFPNHLHVWRSSVEPARKGYAGTLFLYRNTLNPVVTFPEIGAPDPMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  ++    L        +   
Sbjct: 114 -----IITLEFDDFYVTQVYTPNAGDQLRRLPERQEWDIKYAEYLASL--------DRNK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N   +                       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHHEIDLANPASNRRSAGFTDEERAGFTALLAKGFTDTFRYLHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +I+         +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVIKSEMIHSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 LLEID 274


>gi|152992239|ref|YP_001357960.1| exodeoxyribonuclease III [Sulfurovum sp. NBC37-1]
 gi|151424100|dbj|BAF71603.1| exodeoxyribonuclease III [Sulfurovum sp. NBC37-1]
          Length = 256

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 72/303 (23%), Gaps = 76/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
             +SWN+N +   E  +                 ++    D D + LQE+       K  
Sbjct: 5   TFISWNVNGIRAVEKKNA---------------LKWIDESDIDFLGLQEI-------KAE 42

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   +            S     + +A+             +    +         
Sbjct: 43  ADQIPDSIFEKHYKFQSINSSSRKGQ-SGVALFTNIKGTASGGDHIDILNEGRIN----- 96

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                 E +     + +++  +               +      +    +I + +     
Sbjct: 97  ------EYHFGSYVLFNVYFPNG-------QRSEERLAYKLAFYERFLAYINEVRTEGKS 143

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +I GD N                    L     +   +  N  +  F        +   
Sbjct: 144 IIICGDVNTAHKEIDLARPKSNENTSGFLPVERAWMDKLLDNGYIDTFRYIHGDEPDRYS 203

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF +  +  + ++     + +             SDHCP+ +
Sbjct: 204 WWSYRTKARERNVGWRIDYFFVSDDLKEKIVDADILDHI-----------MGSDHCPVKL 252

Query: 301 DYD 303
             D
Sbjct: 253 VLD 255


>gi|297677283|ref|XP_002816533.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Pongo abelii]
          Length = 392

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WNI+ L                +     +  Y      D++FLQE+         
Sbjct: 144 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 183

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +                   TAI ++K  V++  Q      +         R
Sbjct: 184 --IPPYYSYLKKSSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 236

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S               +    Q + +   + +      
Sbjct: 237 NLLCVHVSVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 285

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 286 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 345

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A +  ++ +S   +     +    G+  SDH  +  + D
Sbjct: 346 DRIFFRAAAEEGHIVPQSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389


>gi|84516871|ref|ZP_01004229.1| hypothetical protein SKA53_06827 [Loktanella vestfoldensis SKA53]
 gi|84509339|gb|EAQ05798.1| hypothetical protein SKA53_06827 [Loktanella vestfoldensis SKA53]
          Length = 257

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 82/298 (27%), Gaps = 63/298 (21%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           R Y++ ++          ++ +RL S+NI            K        D   +     
Sbjct: 13  RAYIMGML-----PVTHKSRPLRLASYNIR-----------KAKGVDGRYDPGRIVDILA 56

Query: 63  NLDADIVFLQEMG-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            LDAD++ LQE    +         +        + +   ++ DS      A+ VR+ ++
Sbjct: 57  GLDADVIALQEADFRWRGRPGALSPDMIRQHTDYDLVPVTTQGDSLGWHGNAVLVRRGSL 116

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
               +   L G          R A+ + ++  G    V+  HL                 
Sbjct: 117 VTDVKRLILPGL-------EPRGALRIDMDAGG-PFSVIATHLGL--------------- 153

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                + + L            P  + GDFN                      +R     
Sbjct: 154 -TRFHRQRQLAAISAAVAPDGRPTAVLGDFNEWSA------------TRGLDPLRADFTV 200

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            +   +         +D   + +     L      +          +  R SDH PI 
Sbjct: 201 HAPGKSFHAAMPMAALDRIALGRGLT--LTDGGVVQT--------RQSLRASDHLPIW 248


>gi|229015755|ref|ZP_04172735.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
 gi|229021962|ref|ZP_04178522.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
 gi|228739337|gb|EEL89773.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
 gi|228745543|gb|EEL95565.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
          Length = 263

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102
                L +  +  D D++ LQE+        V        F         +         
Sbjct: 18  EKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKAYNII 77

Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  N K I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIVKEDTFFISENKDTTYWK-TRKIVSATIAYNDKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +          +    +SDH  + +  D
Sbjct: 234 KTVHSSKVIFNGTNRNVISDHFGVEMQLD 262


>gi|332285653|ref|YP_004417564.1| catabolite repression control protein [Pusillimonas sp. T7-7]
 gi|330429606|gb|AEC20940.1| catabolite repression control protein [Pusillimonas sp. T7-7]
          Length = 260

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 81/309 (26%), Gaps = 80/309 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +R++S N+N +                 +       +    +AD + +QE+   + N  A
Sbjct: 2   LRVISANLNGIRS---------------AVRKGFLDWVPQQNADFICMQELKAQADNMTA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +  ++       +S                    +     P + A+  +    
Sbjct: 47  DMLNPEGYYGYFHYAEKKGYSGVGLYARQQ-------PLQVIQGLGVPEIDAEGRY---- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +E+   K+ V+ ++L S    D  +           +    L          
Sbjct: 96  --------LELVYDKLSVISVYLPSGSSGDHRQAAKFVFMEHFFKHLSELAQ-------C 140

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               V+ GD+N                             +  D    +  +        
Sbjct: 141 GRQVVLCGDWNIAHQEIDLKNWKGNLKNSGFLPEERAWLTRVFDEIGWVDVYRSLYPDAT 200

Query: 246 N-ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             A     N+           IDY +            S             + +R SDH
Sbjct: 201 GEAYTWWSNRGQAWAKNVGWRIDYQIASPEIAATAKTASI-----------YKDERFSDH 249

Query: 296 CPISIDYDF 304
            P++IDYD+
Sbjct: 250 APLTIDYDW 258


>gi|319952714|ref|YP_004163981.1| exodeoxyribonuclease iii xth [Cellulophaga algicola DSM 14237]
 gi|319421374|gb|ADV48483.1| exodeoxyribonuclease III Xth [Cellulophaga algicola DSM 14237]
          Length = 253

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 88/303 (29%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+N+N +                         + K ++ D+V LQE+       K 
Sbjct: 1   MKIVSYNVNGIRAAINKGF---------------IDWLKIVNPDVVCLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +       +    +    ++ +A+  K       ++   G    +     R
Sbjct: 39  MEEQLDLSLFEEAGYSYNYWYSAQKKGYSGVAILSKTKP----NHVEFGTGIDYMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++L S   +D L                  ++++T  K    
Sbjct: 95  N-----IRADYDGVSVMSMYLPSGTNIDRLSFKLK--------YMAEFQEYVTDLKVEHP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNANK 249
             +I GD+N     +  ++                W     ++  I   +  +   +   
Sbjct: 142 NLIILGDYNICHKAIDIHNPVGLKNTSGFLPVEREWIGAFMDNGFIDSFRYFNEEPDKYT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DY ++       L +                  + SDHCPI +
Sbjct: 202 WWSYRANARNNNKGWRLDYALVSTPLKDRLKRAVIL-----------AEAKHSDHCPILV 250

Query: 301 DYD 303
           +  
Sbjct: 251 ELS 253


>gi|170088468|ref|XP_001875457.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650657|gb|EDR14898.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 343

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 90/342 (26%), Gaps = 106/342 (30%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +         VRL +WNI  L+  +                     Y +  D DI+ L E
Sbjct: 53  ITFPPREPGTVRLATWNICGLAASQKKGFKY---------------YVEAEDPDILVLTE 97

Query: 74  -----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                + +  A+ K FP   W I              S+   ++  A+  K+  +     
Sbjct: 98  TKVNDVPNDPALTKRFPYAYWSI--------------SSKKSYSGTAILSKHEPLSVTRV 143

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            L G  D     G       ++ +  +  +V+  ++ +        +             
Sbjct: 144 -LPGHPDPSHVKGR------IITLEFENFYVVGTYVVNAGTDLKTLDEKKEWNVHFDAYI 196

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------------------------- 221
           + L        +S  P +  GD N     +G                             
Sbjct: 197 RDL--------DSKKPVIWTGDLNVAPTEMGMYCNHPFGPRLITAADLANPKKKWNKTAG 248

Query: 222 ------DDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNK---------IPIDYFV 261
                   F K +   D       +   ++             +           +D FV
Sbjct: 249 YTEAETTAFRKILASPDDISANKFVDVWRQLHPEDRHYTYFSYRFNCRTKGLGWRLDMFV 308

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +   + +        +Y            SDHCP+ ++ +
Sbjct: 309 LSERMMERVKMCEIRSEIY----------GASDHCPLVMEIE 340


>gi|163734305|ref|ZP_02141745.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149]
 gi|161392313|gb|EDQ16642.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149]
          Length = 262

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 72/305 (23%), Gaps = 71/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L +WNIN++  +EG+                + +       D++ LQE  S       
Sbjct: 3   FSLATWNINSVRLREGL----------------VLKLMTEEAPDVLCLQECKSPV---DK 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P + +                     +  +A+  K       +        +       
Sbjct: 44  MPLDAFAAAGYAH------VVARGQKGYNGVAILSKIPMEEAAAEDFAALGHARH----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +E     + V + ++ +    D  +   +            ++DW   +K    
Sbjct: 93  --IAGRLENG---VTVHNFYVPAG--GDVADREVNEKFGQKLDYLTEMRDWFHTQKPEKS 145

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N         D                           +   ++        
Sbjct: 146 --ILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLAQTQDAGGWVDITRQDIPEGKLF 203

Query: 249 KNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+     +                        ++ SDH P+
Sbjct: 204 SWWSYRAADWDAADKGRRLDHVWATSDIAAAGHDSRIV-------RGARGWEKPSDHAPV 256

Query: 299 SIDYD 303
              +D
Sbjct: 257 FAQFD 261


>gi|156309375|ref|XP_001617698.1| hypothetical protein NEMVEDRAFT_v1g225871 [Nematostella vectensis]
 gi|156195333|gb|EDO25598.1| predicted protein [Nematostella vectensis]
          Length = 232

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 76/242 (31%), Gaps = 26/242 (10%)

Query: 1   MIRKYVLALVFFLVPCTASV------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M R  +  L F  +  +A +       ++ +L++ N+  L       +     ++  +  
Sbjct: 1   MHRCLLSLLCFSTLALSAPIFAQANPDEQFKLLTHNVFLLPST----IKPGWGQQQRAAL 56

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-- 112
                Y +  DA  V L E+    A   +         + T  L                
Sbjct: 57  IAEAAYIQGQDA--VILNELFDNPASNILLNGLQSQYPFQTPVLGRSRTGWDATLGAYSD 114

Query: 113 ------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  +A+  +     Q+   +           N+  V + +  NG+ + ++  H ++
Sbjct: 115 TTPEDGGVAIVSRWPI-EQRVQYVYSQGCGADYLSNKGFVYVKLNRNGQAVHIIGTHAQA 173

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFW 225
                S         ++ + Q   L+++I+ +         I GDFN        +D   
Sbjct: 174 ADTGCS----DGKGTAVRASQFDELQNFISARGIALDQLVFIGGDFNVIKGSSEYHDMLV 229

Query: 226 KT 227
           + 
Sbjct: 230 RL 231


>gi|123473915|ref|XP_001320143.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
 gi|121902942|gb|EAY07920.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
          Length = 407

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 98/298 (32%), Gaps = 25/298 (8%)

Query: 19  SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
              +   ++SWNI    ++ ++   L       T    TL  Q    +  DI+ LQE  +
Sbjct: 121 PQERVFSILSWNILASKVARRDFYPLSTEKCMATYYRDTLTAQIVDEIHPDIIALQEFEA 180

Query: 77  YNA--VAKVFPKNTWCIFYST---ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-- 129
             A   +K F +N + +  +          + +   +   T + + + +V + Q  YP  
Sbjct: 181 RQASDWSKPFIENGYWVTVAPKGRYYTKKPADQLFVHGQATFVNLHRFDVLISQLFYPRD 240

Query: 130 --LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             L+ A D+  +  +   +   V  + K      I      F D+          +    
Sbjct: 241 SKLVSADDTDIKGCDDVVLITAVRTHSKPSKNYIILNVHMKFNDAEVRKRLAEIIMKETL 300

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
               + +       +   ++ GDFN K N       +   +                   
Sbjct: 301 NFAHQQF------KVFGIIVVGDFNDKTNSPTLQRFYDFKLSNIYDAFHSTVNTAIFQK- 353

Query: 248 NKNLRNKIPIDYFVMDQNAYKF--LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +   ID+ ++ +N      L Q+++ ++      I   G   SDH PI    +
Sbjct: 354 ----DDAARIDHILISKNIKVKSILSQDTYGQLAEAHPFIPCYGF-PSDHLPIGAVIE 406


>gi|260170324|ref|ZP_05756736.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2]
          Length = 297

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 79/337 (23%), Gaps = 75/337 (22%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ-----------------------------KVRLVSWNI 31
           M +  +  L+ F+    AS  +                              +R+ ++N+
Sbjct: 1   MKKIVIYTLISFIFSVFASSCEDNKDNSLYYPDFTWDTGDGEEDEDPVTETSMRVATYNL 60

Query: 32  NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYNAVAKVFPKN 87
                         +    T+    + Q  K+ D +I   +E      SY          
Sbjct: 61  Q-----------VETGTGWTNRRERVAQLIKDYDFEICGFEEASWEQRSYLGTQLASDYQ 109

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
                  T    N +   S      +        R      P + +         R  V 
Sbjct: 110 ILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPDIPSNGWDETNFKRFCVW 169

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
              + +  +              ++                Q L D ++ K +   P   
Sbjct: 170 GKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVSDKAKDNTPAFC 218

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
            GDFN   +         +          + +              K  ID+  +     
Sbjct: 219 TGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTRIDFIFV----- 270

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302
                +  + +             LSDH P  I ++ 
Sbjct: 271 -----KHATVLSTRTIVSS-----LSDHYPMVIVVEI 297


>gi|150402181|ref|YP_001329475.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C7]
 gi|150033211|gb|ABR65324.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C7]
          Length = 249

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 79/304 (25%), Gaps = 79/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N +                         + +    DI+ +QE    +     
Sbjct: 1   MKMISWNVNGIRACLKNGFM---------------DFLERESPDIMCIQETKVQSG-QVQ 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++      +S       I     +               G K++      R
Sbjct: 45  LGLDGYFQYWNYAEKKGYSGTAIFTKIKPNNVIL--------------GIKNTEHDGEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   K ++++++  +     +                + L+        +  
Sbjct: 91  -----VLTLEFDKYYLINVYTPNSQRGLTRLEYRQKWDQDFLNYIKTLE--------NEK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +  I  +  +  F +      +  
Sbjct: 138 PVIFCGDLNVAHKEIDLKNPKNNVKNAGFTPEERIGFDNIVDSGFIDTFREFNKEP-DNY 196

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + +     L        +             SDHCP+ 
Sbjct: 197 SWWSYRFNARSKNIGWRIDYFCISKILRDNLKDAFIMSEV-----------MGSDHCPVG 245

Query: 300 IDYD 303
           I ++
Sbjct: 246 IIFE 249


>gi|15901674|ref|NP_346278.1| exodeoxyribonuclease [Streptococcus pneumoniae TIGR4]
 gi|15903702|ref|NP_359252.1| exodeoxyribonuclease [Streptococcus pneumoniae R6]
 gi|111658189|ref|ZP_01408884.1| hypothetical protein SpneT_02000620 [Streptococcus pneumoniae
           TIGR4]
 gi|116516049|ref|YP_817078.1| exodeoxyribonuclease III [Streptococcus pneumoniae D39]
 gi|149004304|ref|ZP_01829075.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
 gi|168483377|ref|ZP_02708329.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1873-00]
 gi|194397999|ref|YP_002038432.1| exodeoxyribonuclease III [Streptococcus pneumoniae G54]
 gi|237649626|ref|ZP_04523878.1| exodeoxyribonuclease III [Streptococcus pneumoniae CCRI 1974]
 gi|237822093|ref|ZP_04597938.1| exodeoxyribonuclease III [Streptococcus pneumoniae CCRI 1974M2]
 gi|303258792|ref|ZP_07344772.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP-BS293]
 gi|303261955|ref|ZP_07347901.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS292]
 gi|303263817|ref|ZP_07349739.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS397]
 gi|303265648|ref|ZP_07351547.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS457]
 gi|303268757|ref|ZP_07354546.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS458]
 gi|61223736|sp|P0A2X3|EXOA_STRPN RecName: Full=Exodeoxyribonuclease
 gi|61223737|sp|P0A2X4|EXOA_STRR6 RecName: Full=Exodeoxyribonuclease
 gi|153627|gb|AAA26879.1| exodeoxyribonuclease [Streptococcus pneumoniae]
 gi|14973347|gb|AAK75918.1| exodeoxyribonuclease [Streptococcus pneumoniae TIGR4]
 gi|15459332|gb|AAL00463.1| Exodeoxyribonuclease [Streptococcus pneumoniae R6]
 gi|116076625|gb|ABJ54345.1| exodeoxyribonuclease III [Streptococcus pneumoniae D39]
 gi|147757737|gb|EDK64752.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
 gi|172043234|gb|EDT51280.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1873-00]
 gi|194357666|gb|ACF56114.1| exodeoxyribonuclease III [Streptococcus pneumoniae G54]
 gi|302637038|gb|EFL67527.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS292]
 gi|302640293|gb|EFL70748.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP-BS293]
 gi|302641713|gb|EFL72071.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS458]
 gi|302644775|gb|EFL75023.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS457]
 gi|302646855|gb|EFL77080.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS397]
 gi|332200400|gb|EGJ14473.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47368]
          Length = 275

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +               +  ++    L        +   
Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|315613690|ref|ZP_07888597.1| exodeoxyribonuclease III [Streptococcus sanguinis ATCC 49296]
 gi|315314381|gb|EFU62426.1| exodeoxyribonuclease III [Streptococcus sanguinis ATCC 49296]
          Length = 296

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 84/322 (26%), Gaps = 57/322 (17%)

Query: 8   ALVFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           A  ++ + C  +   K  +L+SWNI++L+        +  +         + Q     +A
Sbjct: 5   AFFWYNIVCNLNEKGKFMKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENA 58

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           DI+ +QE                   +        S ++     +       K       
Sbjct: 59  DIIAIQETKLSAKGPTKKHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTI 118

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           S+P +GA  S      R      + +     +V  ++  +                  ++
Sbjct: 119 SFPEIGAP-STMDLEGRI-----ITLEFDTFFVTQVYTPNAGDGLKRLEERQVWDVKYAE 172

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPN 231
               L        +   P +  GD+N               R   +       +  +   
Sbjct: 173 YLAQL--------DKEKPVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAT 224

Query: 232 DSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYN 281
                F                +            IDY++      + + +    +    
Sbjct: 225 GFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRVAEKVTKSDMIDSGAR 284

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
           +           DH PI ++ +
Sbjct: 285 Q-----------DHTPIVLEIE 295


>gi|238028924|ref|YP_002913155.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           glumae BGR1]
 gi|237878118|gb|ACR30451.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
           glumae BGR1]
          Length = 256

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 85/305 (27%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +  +  AD V +QE+       KV
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWLGDQQADCVCVQEI-------KV 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      +           A    ++          ++G   S   A  R
Sbjct: 40  SADDLPAEFAAPHGFTGYFHHAQKKGYSGAGLYTRREP-----DDVIIGYGSSEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ V+ +++ S    D  +       +        L        ++  
Sbjct: 95  Y-----VEARFGKLSVVSVYVPSGSSGDERQQAKYRFMNEFMPHLAEL--------KATR 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R +  
Sbjct: 142 EVIVCGDVNIVHKEIDIRNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDPRPDQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          Q S             R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKQTSI-----------FRDIKFSDHAPLT 250

Query: 300 IDYDF 304
           +DYD+
Sbjct: 251 VDYDY 255


>gi|309806468|ref|ZP_07700473.1| exodeoxyribonuclease III [Lactobacillus iners LactinV 03V1-b]
 gi|308167141|gb|EFO69315.1| exodeoxyribonuclease III [Lactobacillus iners LactinV 03V1-b]
          Length = 275

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
            +SWNI++L+        +    R+      +    K  + D+V +QE            
Sbjct: 3   FISWNIDSLNAALTGDSDRAHETRS------VLNKIKEANPDVVAIQETKLRANGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            +     +   + +  S ++     +       K     Q SYPL+GA D+  + G    
Sbjct: 57  CDILADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +     ++  ++  +               +   +    L            P 
Sbjct: 114 ---IITLEFDTFYLTQVYTPNSGNELKRLADREIWDTKYQEYLAKLDQ--------NKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +     +  F        +    
Sbjct: 163 IASGDYNVAHQEIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++ Q     + Q    +    +           DHCPI +
Sbjct: 223 WSQRIRTSKTNNAGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----------DHCPILL 271

Query: 301 DYD 303
             D
Sbjct: 272 KID 274


>gi|254472466|ref|ZP_05085866.1| exodeoxyribonuclease III protein [Pseudovibrio sp. JE062]
 gi|211958749|gb|EEA93949.1| exodeoxyribonuclease III protein [Pseudovibrio sp. JE062]
          Length = 243

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/272 (9%), Positives = 66/272 (24%), Gaps = 58/272 (21%)

Query: 60  YAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
              +   D++ LQE      +  +    K  +                     +  +A+ 
Sbjct: 1   MLLDHAPDVLCLQETKCPDGSFPSAAINKLGYRYV-----------EVHGQKGYHGVALL 49

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +      +        D+         +   V  NG K+ + + ++ +   +   E   
Sbjct: 50  SRVPLENVERKEFCEMGDTRH-------IAADVAFNGGKVRIHNFYVPAGGDVPDPEVND 102

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--NNDDFWKTI------- 228
             +        ++L +  +  K      ++ GD N         ++    K +       
Sbjct: 103 KFAHK-----LKFLDEMESWFKGFDGQSIVVGDLNIAPYENDVWSHKQLIKVVSHTPLEC 157

Query: 229 -------DPNDSLIRFPKEKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLI 271
                  +  + +    K              +            +D+  M     +   
Sbjct: 158 QRLEDVREAGNYVDTMRKHMPMDQKIYTWWSYRAKDWSASDKGRRLDHVWMTPETAQHTK 217

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                             ++ SDH P+    +
Sbjct: 218 DVQIM-------RDARGWEKPSDHAPVMAVLE 242


>gi|145534702|ref|XP_001453095.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420795|emb|CAK85698.1| unnamed protein product [Paramecium tetraurelia]
          Length = 348

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 86/312 (27%), Gaps = 76/312 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                V++ SWN+N                R  +      +Y ++   D++ L E+ +  
Sbjct: 82  FSTPTVKIASWNVNG--------------IRAATKREQAVKYLQDTKFDVICLNELKADQ 127

Query: 79  AV---AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           AV     +  +     F       N          ++ +A+  K   +  +    +   D
Sbjct: 128 AVFDKENLGAQFGKHYFLYLNFCKNKGG-------YSGVAIASKVKPISVKCDIGISKHD 180

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              R          +    ++ +++  ++ +    L+ L+              + L+  
Sbjct: 181 QEGR---------TLTAEYERFYLVACYVPNAGQKLERLDYRTKEWDVDFQNYLEDLRK- 230

Query: 195 ITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFP 238
                    P ++ GD N   +                     D F   +          
Sbjct: 231 -------KKPTILCGDLNVSHHEIDLANPAGNKKTAGFTQEERDQFTNYLQKGWVDSFRH 283

Query: 239 KEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                   +  + R           +DYF++++ +   +I    +               
Sbjct: 284 LHPKEVKYSYFSARFNSKQSNKGWRLDYFIINKESTDAIIMSDINT-----------AVE 332

Query: 292 LSDHCPISIDYD 303
            SDH PI  + D
Sbjct: 333 GSDHVPIECEVD 344


>gi|325972140|ref|YP_004248331.1| endonuclease/exonuclease/phosphatase [Spirochaeta sp. Buddy]
 gi|324027378|gb|ADY14137.1| Endonuclease/exonuclease/phosphatase [Spirochaeta sp. Buddy]
          Length = 331

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/354 (11%), Positives = 94/354 (26%), Gaps = 79/354 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSE--------QEGVSLWKNSVKRT 50
           +   +L  +     C+  +       R++S+N+  L +         E       + +  
Sbjct: 1   MVIVLLVFLILFSGCSCDIQDDPKHFRVLSYNVQNLFDAQLDGGEYPEYQDAKNWTDRSY 60

Query: 51  TSDYTLLRQYAKNLD---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
               T L     +      D + L+E+   + V  +   +     Y    +   S    +
Sbjct: 61  RMRLTTLSTMLLSDRIGFPDAIILEEVEGLSVVQDLLSLHLGRKGYRWYAVAKGSDAAIS 120

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 +A+  ++       +            G R  ++  +      I +  +H KS 
Sbjct: 121 ------VAIISRHPITSSLVH---------GSDGIRPVLQATIATQAGDICLFALHAKSQ 165

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-- 225
               S          L    A+ +     +   S    ++ GDFN     + + +     
Sbjct: 166 IGDGS---------ELRLALAKAVGSAAQKHASS--AVLLCGDFNEDPTSIWSTESGQPA 214

Query: 226 ------------------------KTIDPNDSLIRFPKEKDSRCNANK--NLRNKIPIDY 259
                                   + + P      +  +  +   +            D 
Sbjct: 215 LVDMSHPDAGVYQNAGSLGLVGSSQQLSPALYYCPYLDQAWTSSVSGSCNWDGQWHRYDQ 274

Query: 260 FVMDQNAYKFLIQE--SFSEILYNE---DDIKSRGKRL------SDHCPISIDY 302
            + +   +  +  E  SF+          D +     L      SDH P+ +  
Sbjct: 275 ILCNNKLFDGMGWEYESFTIQNLPSLCSSDGRPYAWNLNTLQGVSDHFPVLMTL 328


>gi|317496367|ref|ZP_07954721.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424]
 gi|316913503|gb|EFV34995.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424]
          Length = 354

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 98/313 (31%), Gaps = 61/313 (19%)

Query: 29  WNINTLSEQEGVSLWKN--------SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--- 77
           WN+      + V  + +              ++ T + +  K   AD+ FLQE+      
Sbjct: 61  WNVGYFGMDKDVDFFMDGGKMVHPIDKAHVENNLTNITRIIKEEAADVTFLQEVDVDSKR 120

Query: 78  -------NAVAKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
                  + + K    ++   +    +            N+ I+T+     +N    Q  
Sbjct: 121 TYNINQVDYLDKALDNSSIFAYNFRVAYIPYPLPPLGKVNSGIYTSTKFNIENAERYQMP 180

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            P        +       +   +E + KK+ +++ HL ++   +  +            Q
Sbjct: 181 IPFTFPTRLANLKRGFSVIYSNIENSDKKLVLINAHLDAYDKDNKGKIA----------Q 230

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNR------------KINYLGNNDDFWKTIDPNDSLI 235
            + L +++ ++       ++  DFN+                L   + F KT+  +   +
Sbjct: 231 TKQLIEFMEKEYAKGNYVLVGADFNQELRDLTKEEIEKTPAELWRAELFDKTLLKDKFKL 290

Query: 236 RFPKEKDS------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +   + S            N   +  ID F+   N     ++               + 
Sbjct: 291 YYDNSRPSARLNNKPYEKGSNGTYEFIIDGFIASDNIEVSQVK------------TLDQD 338

Query: 290 KRLSDHCPISIDY 302
            R SDH P+ + +
Sbjct: 339 YRYSDHNPVKLRF 351


>gi|297204418|ref|ZP_06921815.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
 gi|197716686|gb|EDY60720.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
          Length = 439

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 83/297 (27%), Gaps = 39/297 (13%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +    ++S+N+  L      +        TT+    +  Y      DIV ++E  +Y+A 
Sbjct: 23  SGTFSVLSYNVAGLPSAISSASTP-RESSTTAIGQRIAPY------DIVHVEEDFNYHAY 75

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                 N              +   S  +  + +     +   ++ +   + + D  +  
Sbjct: 76  LYAADTNH----AYRTPTSGGAGIGSGLNTLSKLPYDADDFERVRWNSCQVDSGDCLTPK 131

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G            G  +   ++H  +               +  +     L  +I     
Sbjct: 132 G--FTFIRERLAEGVYVDFYNLHTNAGTNDGD--------LASRADNLNQLSAFIKTH-S 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA------------- 247
           +    V+ GD N +    G  D   +    N     + +                     
Sbjct: 181 AGNAVVVMGDTNTRYTRSG--DTIAEFAAANGLTDPWVQLIRGGTPPAKGSDALVCDQTG 238

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +D  +   +    L   S++        + S    LSDH PI++ + +
Sbjct: 239 TTVPNTCEVVDKVLYRSSKLVSLNATSYNNEHAK--FLTSDNLMLSDHDPITVGFTW 293


>gi|156543084|ref|XP_001605156.1| PREDICTED: similar to ENSANGP00000020924 [Nasonia vitripennis]
          Length = 391

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 75/301 (24%), Gaps = 79/301 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82
           +++ +WN++ +      +                  Y +  DADI+ LQE       +  
Sbjct: 140 IKICTWNVSGIRAVLKKNGMT---------------YLEREDADIIALQETKCETKKIPD 184

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++   +   +            +A+  K   +           D       
Sbjct: 185 EVKLKGYTRYFLDSKKAGY----------CGMALYSKKEPIDIS-----MGLDEEFDDEG 229

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +    +  +++++++ +                   +  Q L        +  
Sbjct: 230 RL-----ITAEYEHFYLVNVYVPNAGNKLVTLPKRLKWNEAFKKHIQDL--------DKK 276

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +I GD N                         D          +  F      + +A
Sbjct: 277 KPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERDGMTDFLQAGFVDTFRLLYPDKTDA 336

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DY+++ +     +            D +       SDHCP+
Sbjct: 337 YTFWAYFNNARSKNIGWRLDYYIVSEKIKNKVC-----------DVVNRDQVFGSDHCPV 385

Query: 299 S 299
            
Sbjct: 386 V 386


>gi|145540457|ref|XP_001455918.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423727|emb|CAK88521.1| unnamed protein product [Paramecium tetraurelia]
          Length = 243

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 86/287 (29%), Gaps = 51/287 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++ WN    +  +   L      +      L+ Q+ K    D+   +E+       
Sbjct: 2   NTLKILQWNTLADTLSDAFPLINKQFLQWNHRSQLIAQFLKQHPCDVYCFEEVDHPEFFQ 61

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V       +F   ++  N             IA RK          P L      ++  
Sbjct: 62  QVLVD---HLFIYQKKQHNSDGIL--------IAYRKDLKLQSVNIVPFLENNKVSNQFF 110

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   ++++     ++  HLK+                +   Q + L   + + K  
Sbjct: 111 --------IKVDFLDFILVVTHLKAKT----------DFEKIRRNQLEQLNKCVKEDK-- 150

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI---- 257
               ++ GDFN +             ++   + +     K +        +N+  +    
Sbjct: 151 ---VILCGDFNTQP-----------ELEAVSNFLEISGMKCTNTTVPTTSKNRGKLETNI 196

Query: 258 -DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            DY +  +  +    Q   +E +   +         SDH  +  +++
Sbjct: 197 KDYILY-KGVHLRQSQVGPTEGVQINESGLPSELFPSDHIFLIGEFE 242


>gi|332240176|ref|XP_003269266.1| PREDICTED: deoxyribonuclease-1-like [Nomascus leucogenys]
          Length = 281

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 88/285 (30%), Gaps = 35/285 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E               +  + + Q       DI  +QE+   +  AV
Sbjct: 22  SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+          +   +++     ++         R   V V+   Y   G +   +  
Sbjct: 71  GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSVVDSYYYDDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQKK 199
            +R    +      +      + L +             +      +   L D ++  ++
Sbjct: 131 FSREPAIVRFSQVTEVREFAIVPLHA-------------APEDAVAEIDALYDVYLDVQE 177

Query: 200 ESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           +      ++ GDFN   +Y+  +      +  + +      +       + +       D
Sbjct: 178 KWGLEDIMLMGDFNAGCSYVRPSQWSSIRLRTSPTFQWLIPDTADTTATSTHCAY----D 233

Query: 259 YFVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300
             V+     +  ++ +S     +      S    + +SDH P+ +
Sbjct: 234 RIVVAGMLLQGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 278


>gi|256085040|ref|XP_002578732.1| neutral sphingomyelinase [Schistosoma mansoni]
 gi|238664115|emb|CAZ34970.1| putative neutral sphingomyelinase [Schistosoma mansoni]
          Length = 631

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 82/312 (26%), Gaps = 43/312 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +K +++++N            + +S  R       +       D D++ LQE+   +   
Sbjct: 4   EKFKVLTFN-------CWAVFFPSSTVRKEDRVNAIASKLSVGDFDVILLQEIWLESDYR 56

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+         YS     N             I     +         L+   D +   G
Sbjct: 57  KLRNILDEKYPYSNYFYCNLIGTGMCIFSKWTIECVFTHPFTANGYPHLIHQADYYCGKG 116

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +  +    G +I     HL +   LD + + Y+        Q   + +++      
Sbjct: 117 --IGLARITSKEGFRINFYVTHLIARYELDRMLDRYNG---HRISQLVEVMEFVRMTSTG 171

Query: 202 LVPFVIAGDFNRKINYLGNN--------DDFW------------KTIDPNDSLIRFPKEK 241
               +I GDFN + N              D W              ++            
Sbjct: 172 SDAIIITGDFNLESNTSAIELFSTSLKLSDAWLNNTVALKNTNITDLESEGCTCDRADNP 231

Query: 242 DSRCNANKNLRNKIPIDYFVMDQN----------AYKFLIQESFSEILYNEDDIKSRGKR 291
                      N   +DY                +Y  L+  S    +         G  
Sbjct: 232 YRNQLWTNTYGNGERLDYIFYRSGPSIIDSFYIPSYAKLVCNSCWLDMRKVP-GDPHGLH 290

Query: 292 LSDHCPISIDYD 303
            SDH  ++  + 
Sbjct: 291 YSDHEGVAASFT 302


>gi|330901156|gb|EGH32575.1| exonuclease III [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 219

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/256 (10%), Positives = 67/256 (26%), Gaps = 60/256 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++VS+NIN L                 +    L         D++ LQE  +       
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + + +                 H  +A+  +N  +        G +     + 
Sbjct: 45  AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHK----GFEGDDEESQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R       + NG+ + +++       F       +        +  + L+  +  +  +
Sbjct: 89  KRFIWGTYADSNGQPVTIMN-----GYFPQGGSRDHPTKFPAKQRFYENLQTLLEGQFRN 143

Query: 202 LVPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
             P ++ GD N                        ++L    ++ + +     +  F   
Sbjct: 144 DQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHL 203

Query: 241 KDSRCNANKNLRNKIP 256
                +       +  
Sbjct: 204 HPEVVDRFSWFDYRSR 219


>gi|190344366|gb|EDK36033.2| hypothetical protein PGUG_00131 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 364

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 78/307 (25%), Gaps = 40/307 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VRL + NI            +   +R     + +        A +V LQE+  +     +
Sbjct: 65  VRLYTHNIR-FDNHNLDKHERYWSERKHLVTSSIDYNTDASFASVVCLQEVLHHQLQDIL 123

Query: 84  FPK------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           F        + W  +             +     T+      N        P + +K  +
Sbjct: 124 FNLNNKDTRDEWTYYGVGRSDGYTRGEYAPILYRTSDWDLVDNKTFWLSETPRIPSK-GW 182

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             A  R    + +      +  L+     F              +     AQ + + +  
Sbjct: 183 DAALERIVTMVTLRSKLNPLVTLNFFNTHF---------DHRGKAARRHSAQLIANKMEN 233

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKNLRN-K 254
              +  P  + GDFN +             +  + +L                       
Sbjct: 234 Y--NNYPSFLCGDFNTQPTDEPYQILIKHGMKDSRALIDHLHHYGHTGTFTGFNKHNEAN 291

Query: 255 IPIDYFVM------DQNAYKFLIQESFSEILYNEDDIKS------------RGKRLSDHC 296
             IDY           +       ES +   ++                      +SDH 
Sbjct: 292 SVIDYVWAPYFAENGNDQPSMETTESINYYNWDFHKTHKIALRSFAILHSYYDFYMSDHR 351

Query: 297 PISIDYD 303
           P+S DYD
Sbjct: 352 PVSADYD 358


>gi|121708426|ref|XP_001272127.1| transcription factor, putative [Aspergillus clavatus NRRL 1]
 gi|148886824|sp|A1CIJ6|CCR4_ASPCL RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|119400275|gb|EAW10701.1| transcription factor, putative [Aspergillus clavatus NRRL 1]
          Length = 667

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/360 (10%), Positives = 92/360 (25%), Gaps = 72/360 (20%)

Query: 16  CTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
             ++  +K+ ++S+N    S   Q         V        L+    ++  +DIV LQE
Sbjct: 290 TASASTEKITVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILSELRSHGSDIVCLQE 349

Query: 74  MG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           +     +     ++   +   +++   R +   + D+      A   +     +L +   
Sbjct: 350 IDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKGVDGCATFFKGSKFILLDKQLI 409

Query: 130 LLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSF------- 167
             G             D ++R   +  + ++V       G +  V++ HL          
Sbjct: 410 NFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGSRFIVVNAHLYWDPAFKDVK 469

Query: 168 -----------------------CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                                  C   +            +   +     +       +P
Sbjct: 470 LIQTAILMEEITKLSETYAKWPACTDKAAFRFSKEEGQTEAPPPEEPAPSVQYSSGDQIP 529

Query: 205 FVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC---- 245
            ++ GD N        N                  +  +        F  +         
Sbjct: 530 LLMCGDLNSSPGSAAYNLIAHGRLDEEHPDLEKRLYGNLSKVGMTHPFKLKSAYGSIGEL 589

Query: 246 -NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              N     K  +DY      + +   +     +    +          SDH  +  ++ 
Sbjct: 590 PFTNYTPDFKDILDYIWYSSNSLHVSALLGEVDKDYLQKVPGFPNYHFPSDHIALFAEFT 649


>gi|291234355|ref|XP_002737116.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 443

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 91/303 (30%), Gaps = 49/303 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NA 79
           Q +R+ ++N+              S         +L +       DI+ +QE+      A
Sbjct: 26  QPLRIAAFNVQVFGV---------SKMSKPMVPEILTKIILRY--DIILIQEVRDSTGQA 74

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-------------------TAIAVRKKN 120
           +  +  +         ++  +     S ++I                     A   RK  
Sbjct: 75  IQDLLYRVNTADALEKQQDASCDAEKSCDNIDGDFDMVISERLGRSSSKEQYAYIYRKSR 134

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V V    +   G ++  +    R    +        +    I        D++       
Sbjct: 135 VSVTDSYHYDDGLEEDSTDHYEREPFIVRFHSPFTDVKDFAIGGIHTKPDDAVSEIDRL- 193

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                  A    D + +        +IAGD+N   +Y+ ++D     +   +  +    +
Sbjct: 194 -------ADVYDDIVKRWSLED--VLIAGDYNAACSYVKSDDWKNIRLRSQERFLWLIAD 244

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-QESFSEILYNEDDIKSRGKR--LSDHCP 297
                 A          D  V+  +  K  +   S  E L++++   +  +   +SDH P
Sbjct: 245 NVDTNVAGDICAY----DRLVVGGDLMKRAVWPGSAREFLFDKEYGLTDEQTSEVSDHYP 300

Query: 298 ISI 300
           + +
Sbjct: 301 VEM 303


>gi|94989847|ref|YP_597947.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10270]
 gi|94543355|gb|ABF33403.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10270]
          Length = 303

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 90/327 (27%), Gaps = 57/327 (17%)

Query: 3   RKYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +  +++    +    +     +++L+SWNI++L+        +  + R       +    
Sbjct: 7   KSLIVSFFVTITTRLSVRKRNQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              DADI+ +QE              T   ++     +  S  +     +       KN 
Sbjct: 61  VAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                ++P +GA  +    G       ++ +  +  +V  ++  +        +      
Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226
              +     L        ++  P +  GD+N               R   +       + 
Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276
            +        F        +       +            IDY++        + +    
Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMI 286

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
                +           DH PI +D D
Sbjct: 287 SSGERQ-----------DHTPIFLDID 302


>gi|82913491|ref|XP_728665.1| exodeoxyribonuclease III [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485131|gb|EAA20230.1| exodeoxyribonuclease III [Plasmodium yoelii yoelii]
          Length = 271

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 89/316 (28%), Gaps = 80/316 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +     +R+++ N+N +        +                +    +ADIV LQE+
Sbjct: 6   PSPSIPCLPMRIITLNVNGIRSAARKGFF---------------DWLPKQNADIVCLQEI 50

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              +     ++F   ++  +Y       +          + +A+  +             
Sbjct: 51  KAQTTQLNDELFWPESYACYYLEAEKKGY----------SGVALYARKEPDDVIQGLGWD 100

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D+ +R          +E    ++ V+ +++ S    +  +       ++         
Sbjct: 101 DMDTEARY---------LEARFGELSVVSLYIPSGSSSEQRQ-------AVKFXFLDRFL 144

Query: 193 DWITQKKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIR 236
            ++     S   ++  GD+N                             +  +    +  
Sbjct: 145 PFLDDCARSGRQYIFCGDWNIAHKPIDLKNWRSNQKNSGFLPEERAWLDRVFEEAGWVDA 204

Query: 237 FPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           F               N+           IDY V+     + +   +             
Sbjct: 205 FRAVNPEPE-QYTWWSNRGQAWAKNVGWRIDYQVVSPGLRELIRSAAI-----------Y 252

Query: 288 RGKRLSDHCPISIDYD 303
           + +R SDH P+ IDYD
Sbjct: 253 KEERFSDHAPLIIDYD 268


>gi|239979144|ref|ZP_04701668.1| hypothetical protein SalbJ_06897 [Streptomyces albus J1074]
 gi|291451021|ref|ZP_06590411.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291353970|gb|EFE80872.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 341

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 86/320 (26%), Gaps = 85/320 (26%)

Query: 1   MIRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47
           ++R+   AL+  L+P               ++    + + + N+N  +            
Sbjct: 90  LVRRSATALIALLLPAVVWLNLFGGLVTDKSATGGDLTVATHNVNADNP----------- 138

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                D     +      AD+V L+E+                   +    +  +     
Sbjct: 139 -----DPAATARDLAASGADVVALEELSPEA-------------VPAFREALAATYPHHA 180

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS- 166
            +    +  +            L   +          A+   V+     + V   HL S 
Sbjct: 181 VEGTVGLWSKYPLSATAPVDIKLGWTR----------ALRSTVDTPSGPLAVYVAHLPSV 230

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
              +D+         S     A+ L   I    E L   V+ GD N  +N         +
Sbjct: 231 RVKVDAGFTAGQRDSS-----AEALGLAIRG--EELDRVVLLGDLNGTMND--------R 275

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
            + P  S +R  +                   ID  ++     + +   S   +      
Sbjct: 276 ALSPVTSQMRSTQGAAGNGFGFSWPASFPMARIDQIMV-----QGVEPVSSWTLP----- 325

Query: 285 IKSRGKRLSDHCPISIDYDF 304
                +  SDH PI+    F
Sbjct: 326 -----RTASDHLPIAARISF 340


>gi|315445296|ref|YP_004078175.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1]
 gi|315263599|gb|ADU00341.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1]
          Length = 263

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 78/307 (25%), Gaps = 82/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LV++NI                     D          LDADI+ LQE+ S  A + +
Sbjct: 1   MKLVTFNILHGRTPG-----------AEVDLDRFVDCVAGLDADILALQEVDSIQARSGL 49

Query: 84  FPKNTWCIFYSTER---------------LINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                        R                +  +  +        +A+  +   V  Q  
Sbjct: 50  ADLTALAAEAMGARSHRFVAAIAGTPGATWMAATGEEQPGTAAYGVALLSRYPAVSWQVA 109

Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            L      F                 R AV    +    ++ V + HL      +     
Sbjct: 110 RLPRIPFPFPLYLREPRKVVVVHEEPRAAVIGRFDTPLGELTVANTHLSFVPGWNRY--- 166

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                         L   +   +    P+++ GD N                 P     R
Sbjct: 167 -------------QLHHLMRDVRGLPSPWIVTGDLNMPAK-------------PARRWSR 200

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                 +        R    +D+ + D+ A             +      +    +SDH 
Sbjct: 201 LHCLASAPTFPA--DRPTRQLDHVLTDEPA-------------FTIRSYDTPEMAISDHR 245

Query: 297 PISIDYD 303
           P+ +D +
Sbjct: 246 PLVVDLE 252


>gi|259500789|ref|ZP_05743691.1| exodeoxyribonuclease III [Lactobacillus iners DSM 13335]
 gi|302190760|ref|ZP_07267014.1| exonuclease III [Lactobacillus iners AB-1]
 gi|312871137|ref|ZP_07731235.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 3008A-a]
 gi|312872693|ref|ZP_07732758.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2062A-h1]
 gi|312874955|ref|ZP_07734974.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2053A-b]
 gi|329919752|ref|ZP_08276703.1| exodeoxyribonuclease III [Lactobacillus iners SPIN 1401G]
 gi|259167483|gb|EEW51978.1| exodeoxyribonuclease III [Lactobacillus iners DSM 13335]
 gi|311089700|gb|EFQ48125.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2053A-b]
 gi|311091735|gb|EFQ50114.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2062A-h1]
 gi|311093151|gb|EFQ51497.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 3008A-a]
 gi|328937099|gb|EGG33527.1| exodeoxyribonuclease III [Lactobacillus iners SPIN 1401G]
          Length = 275

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 84/303 (27%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
            +SWNI++L+        +    R+      +    K  + D+V +QE            
Sbjct: 3   FISWNIDSLNAALTGDSDRAHETRS------VLNKIKEANPDVVAIQETKLRANGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            +     +   + +  S ++     +       K     Q +YPL+GA D+  + G    
Sbjct: 57  CDILADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVTYPLIGAPDTMDQEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +     ++  ++  +               +   +    L            P 
Sbjct: 114 ---IITLEFDTFYLTQVYTPNSGNELKRLADREIWDTKYQEYLAKLDQ--------NKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +     +  F        +    
Sbjct: 163 IASGDYNVAHQEIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++ Q     + Q    +    +           DHCPI +
Sbjct: 223 WSQRIRTSKTNNAGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----------DHCPILL 271

Query: 301 DYD 303
             D
Sbjct: 272 KID 274


>gi|255536608|ref|YP_003096979.1| AP endonuclease domain protein [Flavobacteriaceae bacterium
           3519-10]
 gi|255342804|gb|ACU08917.1| AP endonuclease domain protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 325

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 91/328 (27%), Gaps = 91/328 (27%)

Query: 1   MIRK---YVLALVFFLVPCT---------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48
           M +K   + LA+   L+  T         ++    +++V+ NI                 
Sbjct: 60  MWKKRALFFLAVSLLLINPTRRWLNFTGESNEKANLKIVTMNIKGGGYG----------- 108

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                   + +Y     AD+V  QE                         ++        
Sbjct: 109 -----REAIYEYLNTSGADVVLAQE---------------------HMGELSVPGYSHRT 142

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
           D +   A+  K   + Q+        +         A    + INGK I  ++I+L  F 
Sbjct: 143 DTYELTALNSKTEILHQEKIKTSENGE---------AFFADIRINGKTIRFVNIYLNPFS 193

Query: 169 FLDS---LENTYSPSCSLLSQQAQWLKDWITQKKES-----------LVPFVIAGDFNRK 214
           F  S       Y  +   L      L       ++              P ++AGDFN  
Sbjct: 194 FDKSKVKPSEDYDKNKRKLRYILSTLIPTFKAHQDEVSVIKKTIAESPYPVIVAGDFNAV 253

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
            N               +    F +  +    +  + +  I IDY    +          
Sbjct: 254 PNSYEYYQL------SENLKDVFVETGNGNSTSFHDYKIPIRIDYVFCSEEITP------ 301

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                        R  ++SDH PI  ++
Sbjct: 302 -------VRYTVDRRAKMSDHYPIIAEF 322


>gi|152985117|ref|YP_001351598.1| hypothetical protein PSPA7_6287 [Pseudomonas aeruginosa PA7]
 gi|150960275|gb|ABR82300.1| hypothetical protein PSPA7_6287 [Pseudomonas aeruginosa PA7]
          Length = 274

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 79/294 (26%), Gaps = 62/294 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +         ++   + +     D D+V L
Sbjct: 12  PGDGRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLA--DYDLVAL 69

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSY 128
           QE    +  +    +                   +   I      +  R +   +     
Sbjct: 70  QEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIAQHSNGLLSRWRPSLLEDHPL 129

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           P             R A+ +        + V+ +HL                    ++Q 
Sbjct: 130 PGPPG---------RGAIFVRFGDGPDALVVVMMHLALG-------------ARTRTRQL 167

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            ++++ I          V+ GD N               +  N  L              
Sbjct: 168 AYIRELIGDY----RHQVLMGDMNTHAVD----------LLENSPLRDLGLMAPQVEATF 213

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + R +  +D+ ++  +     +                  + +SDH P+S++ 
Sbjct: 214 PSWRPQRNLDHILLSSDLALERVDV--------------LDQPISDHLPVSVEI 253


>gi|148984296|ref|ZP_01817591.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP3-BS71]
 gi|225859607|ref|YP_002741117.1| exodeoxyribonuclease III [Streptococcus pneumoniae 70585]
 gi|225861640|ref|YP_002743149.1| exodeoxyribonuclease III [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230311|ref|ZP_06963992.1| exodeoxyribonuclease III [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254703|ref|ZP_06978289.1| exodeoxyribonuclease III [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503568|ref|YP_003725508.1| exodeoxyribonuclease III [Streptococcus pneumoniae TCH8431/19A]
 gi|147923585|gb|EDK74698.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP3-BS71]
 gi|225720715|gb|ACO16569.1| exodeoxyribonuclease III [Streptococcus pneumoniae 70585]
 gi|225726783|gb|ACO22634.1| exodeoxyribonuclease III [Streptococcus pneumoniae Taiwan19F-14]
 gi|298239163|gb|ADI70294.1| exodeoxyribonuclease III [Streptococcus pneumoniae TCH8431/19A]
 gi|301800627|emb|CBW33270.1| exodeoxyribonuclease [Streptococcus pneumoniae OXC141]
 gi|327390006|gb|EGE88351.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04375]
 gi|332074195|gb|EGI84673.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41301]
          Length = 275

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|148989637|ref|ZP_01820969.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP6-BS73]
 gi|147924954|gb|EDK76036.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP6-BS73]
          Length = 275

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +               +  ++    L        +   
Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDTKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|317476874|ref|ZP_07936117.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii
           1_2_48FAA]
 gi|316907049|gb|EFV28760.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 335

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 90/343 (26%), Gaps = 61/343 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSE-------QEGVSLWKNSVKRT 50
           M +   L    F V    +   +     +  +N+  L +        +   L   S + T
Sbjct: 1   MRKVTFLFSFCFCVIVAVAQNTERKLYSIAFYNLENLFDTIHDAGKNDHDFLPDGSYQWT 60

Query: 51  TSDYT-----------LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
              Y             L +        ++ + E+ +   +  +  +     +       
Sbjct: 61  AKKYESKLHNLSMVLGSLSRNLVPEGPAVIGVAEVENRRVLTDLVSQPAISNYKFIHYEG 120

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
              +      I  A+    +   V      L    +  +    R  + +   +  +++ V
Sbjct: 121 PDKR-----GIDCALLYDPQQFTVTNSKLVLSTPFEGDTVHLTRGFLIVDGRLADERVCV 175

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  H  S           SP     ++Q + L D +  +++  +   + GD N       
Sbjct: 176 IVNHWPSR-------GAKSPVRVHAAKQVKVLTDSL-LREDKKLKLFVMGDMNDDPMDES 227

Query: 220 N-----------------NDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIP 256
                              + +WKT++         + K +              +  + 
Sbjct: 228 MQTLGARKYISGMKAKQFYNPWWKTLEDKGVGTLLYRGKWNLFDQIVLSRPLVKTKKGLR 287

Query: 257 IDY--FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            D+    +     +      +          +      SDH P
Sbjct: 288 YDHNEVFIRDYLIQ--QDGKYKGSPLRTHGGRVWLNGYSDHLP 328


>gi|296217531|ref|XP_002755080.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Callithrix
           jacchus]
          Length = 362

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 86/288 (29%), Gaps = 50/288 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WN++ L                      +  Y      D+VFLQE+         
Sbjct: 114 FSLMTWNVDGLDLNN-----------LAERARGVCSYLVLYSPDVVFLQEV--------- 153

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +C +                   TAI ++K  V++  Q      + +       R
Sbjct: 154 --IPPYCSYLKKRAKNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTN-----MMR 206

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S                    Q + +   + +      
Sbjct: 207 NLLCVHVNVSGNELCLMTSHLESTKGH----------AKERMNQLKIVLKKMQE-APESA 255

Query: 204 PFVIAGDFNRK-------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             + AGD N +            N  D W+ +       ++  +     N       K+ 
Sbjct: 256 TVIFAGDTNLRDQEITKCGGLPSNIVDVWELL-GKPKHCQYTWDTQMNSNLGITAACKLR 314

Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            D       A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 315 FDRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 359


>gi|296197295|ref|XP_002746222.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Callithrix
           jacchus]
          Length = 392

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 86/288 (29%), Gaps = 50/288 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WN++ L                      +  Y      D+VFLQE+         
Sbjct: 144 FSLMTWNVDGLDLNN-----------LAERARGVCSYLVLYSPDVVFLQEV--------- 183

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +C +                   TAI ++K  V++  Q      + +       R
Sbjct: 184 --IPPYCSYLKKRAKNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTN-----MMR 236

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S                    Q + +   + +      
Sbjct: 237 NLLCVHVNVSGNELCLMTSHLESTKGH----------AKERMNQLKIVLKKMQE-APESA 285

Query: 204 PFVIAGDFNRK-------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             + AGD N +            N  D W+ +       ++  +     N       K+ 
Sbjct: 286 TVIFAGDTNLRDQEVTKCGGLPSNIVDVWELL-GKPKHCQYTWDTQMNSNLGITAACKLR 344

Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            D       A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 345 FDRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389


>gi|157133993|ref|XP_001663108.1| carbon catabolite repressor protein [Aedes aegypti]
 gi|108870647|gb|EAT34872.1| carbon catabolite repressor protein [Aedes aegypti]
          Length = 465

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/342 (11%), Positives = 89/342 (26%), Gaps = 65/342 (19%)

Query: 27  VSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +N+  +  + ++      +           +    ++  ADI+ LQE+ +        
Sbjct: 1   MCYNVLCDKYATRQMYGYCPSWALSWEYRKKAILDEIRHYSADIISLQEVETDQFFNFFK 60

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           P+     +       + +K  S +D       AI  R     ++++           +  
Sbjct: 61  PELKNDGYEGIFSPKSRAKTMSESDRKYVDGCAIFFRSSKFSLIKEHLVEFNQLAMANAE 120

Query: 141 GNRRAVELLVEINGKKIWV----------------------LDIHLKSFCFLDSLENTYS 178
           G+   +  ++  +   +                        + +      +     +   
Sbjct: 121 GSDHMLNRVMPKDNIGLAALLKVKESAWEGVPPEQVAASQPILVCTAHIHWDPEFCDVKL 180

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPF-------VIAGDFNRKINYLGN----------- 220
               +LS + + + D +         F       V+ GDFN   +               
Sbjct: 181 IQTMMLSNELKTILDEVGHSFRPGHKFDVNNVQLVLCGDFNSLPDSGVIEFLSAGRVSMD 240

Query: 221 --------NDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPIDYFVMDQ 264
                        + I   D+   F                  N     K  IDY    +
Sbjct: 241 HQDFKELGYKSCLQRISNCDTPNEFTHSFKLASAYSEDIMPYTNYTFDFKGIIDYVFYSK 300

Query: 265 NA---YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   L   S   +  N+          SDH P+ ++ +
Sbjct: 301 QGMIPLGLLGPISSDWLRDNKVVGCPHPHIPSDHFPLLVELE 342


>gi|88813076|ref|ZP_01128318.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231]
 gi|88789709|gb|EAR20834.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231]
          Length = 267

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 85/310 (27%), Gaps = 73/310 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S    +++ + N+N +        +                +      D++ +QE  +  
Sbjct: 2   SAGMSLKITTLNLNGIRAAARKGFF---------------DWFARERPDVLCVQETKAQR 46

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A            +++          D+    ++ +A+  +      ++       D   
Sbjct: 47  AQLDGNALFFPEGYHA-------FFHDAEQRGYSGVALYARQEPDEVRTGLGWPEIDREG 99

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R          +E    K+ V+  ++ S       ++             + L D +   
Sbjct: 100 RW---------LEARFGKLSVVSFYMPSGTSGAQRQD-------FKYTFMEPLLDHLKSL 143

Query: 199 KESLVPFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            E+   ++I GD+N                   +L     +   +      +   +  + 
Sbjct: 144 CEAGREYIICGDWNIAHKPIDLKNWRSNQKNSGFLPEERAWLDRLFDEAGFVDAFRLVNL 203

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           IDY ++     + +                   +R SD
Sbjct: 204 EAEQYTWWSFRGQAWDNNTGWRIDYHMITPGLRERVRGAEI-----------YTAERFSD 252

Query: 295 HCPISIDYDF 304
           H P+++ YD+
Sbjct: 253 HAPLTLAYDW 262


>gi|302338290|ref|YP_003803496.1| endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM
           11293]
 gi|301635475|gb|ADK80902.1| Endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM
           11293]
          Length = 250

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 76/287 (26%), Gaps = 49/287 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L + NI                ++       L  +    + DI   QE+       + 
Sbjct: 7   FSLCTCNIWN-------------TEKWEQRKVALEDFLVRFNPDICCFQEIREETM--RF 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +         +         +       I  RK   R    +   L   +   R    
Sbjct: 52  LDEAMPFHARVEDDFNGWRNEGN-------IYYRKDLFRETGHTELFLDMPEPDRRLF-- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             ++L    +G+K  V  +HL       +  +      S   ++A  +  W+  +K    
Sbjct: 103 -ILDLECLADGRKFQVCTVHLTH----QNNRDEQDTGTSYRHEEALKIARWLKNRKSDAP 157

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------RNKIPI 257
           P ++ GDFN   +         + +        F +    +     N            I
Sbjct: 158 PLLLCGDFNDPWHPS-------RILAEAGLNDVFYELGLLQPPTFPNPALSEEIYMNETI 210

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           D  +        L           +         +SDH P+   ++F
Sbjct: 211 DRIMYGGGPLPVLASV-------VDFHGSGASCGVSDHKPVVAVFEF 250


>gi|255073017|ref|XP_002500183.1| predicted protein [Micromonas sp. RCC299]
 gi|226515445|gb|ACO61441.1| predicted protein [Micromonas sp. RCC299]
          Length = 590

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/355 (10%), Positives = 84/355 (23%), Gaps = 70/355 (19%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           S      ++++N+  +  +  E                  + +     DADI+ LQE+ S
Sbjct: 231 SEGGTFTVLTYNVLADLYATSEMYGYTPQWALSWNYRRQNILKEIVMHDADILCLQEVQS 290

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV--------RVLQQSY 128
            +       +     + +  +            +    A+  K           V     
Sbjct: 291 DHFEDFFAGELAKAGYTAVYKKKTAQVFSQGTYVIDGCAIFFKKDRFTLIKKYEVEFNKA 350

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-----------CFLDSLENTY 177
            L   +     +  + A+  L++ N   I VL+   +             C  ++  +  
Sbjct: 351 ALSLVESLGGSSQKKDALNRLMKDNVALIVVLEALEQPGVQAPQGKRQLLCVANTHIHAN 410

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           +    +   Q   L   + +   S   P V+ GDFN        ++              
Sbjct: 411 TELNDVKLWQVHTLLKGLEKIAASAEIPMVVCGDFNSVPGSAA-HNLLSNGRVDGAHPEL 469

Query: 237 FPK---------------------------------------------EKDSRCNANKNL 251
                                                                   N   
Sbjct: 470 ATDPFGILRPPSKLQHPLPLVSAYTALTKQPCLESEAAERQRTRMDAQGTGEPIFTNCTK 529

Query: 252 RNKIPIDYFVMDQNAYKFLIQESF--SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +DY     +    L        +   N+       +  SDH  +  ++ +
Sbjct: 530 DFFGTLDYIFYTDDTLAPLSLLELPSEKECRNKYGGLPNTQCSSDHVALMAEFQW 584


>gi|225567928|ref|ZP_03776953.1| hypothetical protein CLOHYLEM_04001 [Clostridium hylemonae DSM
           15053]
 gi|225163216|gb|EEG75835.1| hypothetical protein CLOHYLEM_04001 [Clostridium hylemonae DSM
           15053]
          Length = 350

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/319 (10%), Positives = 90/319 (28%), Gaps = 60/319 (18%)

Query: 20  VAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
                 ++++N                G  +  +S +    +   +    +   AD+ FL
Sbjct: 50  AGDTFTVLTYNTGYAGLSRDEDFFMDGGEKVMPDSRELVEHNLKGITSVLREQKADVYFL 109

Query: 72  QEMGSYNAVAKVFPKNTWC---------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           QE+   +  +    +  +            Y+ +             + + +        
Sbjct: 110 QEVDLDSKRSYHLNEKEYYEKELGLPGIFAYNFKCDYVPYPLPPIGKVESGLLTMTGIGM 169

Query: 123 VLQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYS 178
                  L  +     +  N  R  +E  + + G  K++ +++ HL+++           
Sbjct: 170 SEASRISLPESFTWPVKTCNLKRCMLETRIPVGGGDKELVLINFHLEAY----------- 218

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI---------D 229
            S      Q++ L   +  + +     +  GDFN+    +       +           D
Sbjct: 219 DSGEGKIAQSKMLAQKLETEYKKGNYVIAGGDFNQTFEDMDKYPVHSRDNWTPGVVGKDD 278

Query: 230 PNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
             +       +    C         N        +D F++  N     ++   ++  Y  
Sbjct: 279 IPEGFSFAVSDNAPTCRLLNGPYSGNYEDSQVYVLDGFIVSDNVEVKELENIDTQFEYT- 337

Query: 283 DDIKSRGKRLSDHCPISID 301
                      DH P+ ++
Sbjct: 338 -----------DHQPVRME 345


>gi|167561089|ref|ZP_02354005.1| exodeoxyribonuclease III [Burkholderia oklahomensis EO147]
 gi|167568307|ref|ZP_02361181.1| exodeoxyribonuclease III [Burkholderia oklahomensis C6786]
          Length = 256

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 85/305 (27%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +    +AD V +QE+       KV
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEI-------KV 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F       ++           A    ++          ++G   S   +  R
Sbjct: 40  SADDLPAEFVEPHGFRSYFHHAEKKGYSGAGLYLRREP-----DDVIIGYGSSEFDSEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ V+ +++ S    D  +                L        ++  
Sbjct: 95  Y-----VEARFGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KAKR 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +  +   +   +  D+R    
Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDDVGYVDVFRTLDARPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          + S             R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIAGTAKRTSI-----------FRDIKFSDHAPLT 250

Query: 300 IDYDF 304
           +DYD+
Sbjct: 251 VDYDY 255


>gi|170092721|ref|XP_001877582.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647441|gb|EDR11685.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 615

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 79/350 (22%), Gaps = 67/350 (19%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
             A+  R++ +NI     + +       +          L+     N  AD + LQE+  
Sbjct: 264 PNAETFRVLCYNILCERCATERLYGYTPSWALAWEYRKDLILTEIINSGADFLCLQEVDI 323

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKK-------------NV 121
                          +       + S+  +  +       A   K               
Sbjct: 324 AAYEDYFTKNLAEHGYEGVYWPKSRSRTMNEADRRQVDGCATFYKADRYQLVEKHLVEFS 383

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
            V  Q        D F+R   +  + ++ +  +        I      +  +  +     
Sbjct: 384 AVAMQRQDFKKTDDMFNRVLGKEHLAIVSLMEDKVTGTRFVIANAHIHWDPAYCDVKLVQ 443

Query: 181 CSLLSQQAQWLKDWITQKKESLV------------------------PFVIAGDFNRKIN 216
            +LL  + + +     +                              P +I GDFN    
Sbjct: 444 AALLVDEIEKMASHFAKYPPRPPPSASTSSIVQAYRTPPVYTDGTKIPLIICGDFNSIP- 502

Query: 217 YLGNNDDFWKTIDPNDSLIR-----------------------FPKEKDSRCNANKNLRN 253
             G  D       P D +                                    N     
Sbjct: 503 SSGVYDFLSNGTLPADHVDFKSHKYGRYTSEGLRHRFGLKSAYAAPGAGEPPVTNYVPTF 562

Query: 254 KIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  IDY      N     I     +    +          SDH  I  ++
Sbjct: 563 QGHIDYLWYSAANLGVNAILSGVDKDYLEKVVGFPNAHFPSDHVCIVAEF 612


>gi|71910153|ref|YP_281703.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005]
 gi|71852935|gb|AAZ50958.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005]
          Length = 303

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 90/327 (27%), Gaps = 57/327 (17%)

Query: 3   RKYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +  +++    +    +     +++L+SWNI++L+        +  + R       +    
Sbjct: 7   KSLIVSFFVTITTRLSVRKRNQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              DADI+ +QE              T   ++     +  S  +     +       KN 
Sbjct: 61  VAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                ++P +GA  +    G       ++ +  +  +V  ++  +        +      
Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226
              +     L        ++  P +  GD+N               R   +       + 
Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPNSNRRSPGFTDEERQGFT 226

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276
            +        F        +       +            IDY++        + +    
Sbjct: 227 NLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMI 286

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
                +           DH PI +D D
Sbjct: 287 SSGERQ-----------DHTPILLDID 302


>gi|325913687|ref|ZP_08176049.1| exodeoxyribonuclease III [Lactobacillus iners UPII 60-B]
 gi|325477046|gb|EGC80196.1| exodeoxyribonuclease III [Lactobacillus iners UPII 60-B]
          Length = 275

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
            +SWNI++L+        +    R+      +    K  + D+V +QE            
Sbjct: 3   FISWNIDSLNAALTGDSDRAHETRS------VLNKIKEANPDVVAIQETKLRANGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            +     +   + +  S ++     +       K     Q SYPL+GA D+  + G    
Sbjct: 57  CDILADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +     ++  ++  +               +   +    L            P 
Sbjct: 114 ---IITLEFNSFYLTQVYTPNSGNELKRLADREIWDTKYQEYLTKLDQ--------NKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +     +  F        +    
Sbjct: 163 IASGDYNVAHQEIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++ Q     + Q    +    +           DHCPI +
Sbjct: 223 WSQRIRTSKTNNSGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----------DHCPILL 271

Query: 301 DYD 303
             D
Sbjct: 272 KID 274


>gi|312873321|ref|ZP_07733376.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2052A-d]
 gi|311091201|gb|EFQ49590.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2052A-d]
          Length = 275

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 84/303 (27%), Gaps = 56/303 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
            +SWNI++L+        +    R+      +    K  + D+V +QE            
Sbjct: 3   FISWNIDSLNAALTGDSDRAHETRS------VLNKIKEANPDVVAIQETKLRANGPTKKH 56

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            +     +   + +  S ++     +       K     Q SYPL+GA D+  + G    
Sbjct: 57  CDILADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGR--- 113

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +     ++  ++  +               +   +    L            P 
Sbjct: 114 ---IITLEFNSFYLTQVYTPNSGNELKRLADREIWDTKYQEYLTKLDQ--------NKPV 162

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD+N                           +  +     +  F        +    
Sbjct: 163 IASGDYNVAHQEIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSW 222

Query: 251 LRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +            IDY+++ Q     + Q    +    +           DHCPI +
Sbjct: 223 WSQRIRTSKTNNAGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----------DHCPILL 271

Query: 301 DYD 303
             D
Sbjct: 272 KID 274


>gi|228899090|ref|ZP_04063362.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           4222]
 gi|228860531|gb|EEN04919.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           4222]
          Length = 263

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTLAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLKG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|114704450|ref|ZP_01437358.1| putative Endonuclease/Exonuclease/phosphatase family protein
           [Fulvimarina pelagi HTCC2506]
 gi|114539235|gb|EAU42355.1| putative Endonuclease/Exonuclease/phosphatase family protein
           [Fulvimarina pelagi HTCC2506]
          Length = 248

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 89/286 (31%), Gaps = 54/286 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              +R+VSWNI+               +R   +        + +  DI+ LQE+      
Sbjct: 9   PGTLRIVSWNIHG-----------AIGRRRRPNPERTIAEIERMAPDILILQEVDGRTMF 57

Query: 81  AKVFPKNTWC--IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF- 137
            +      +     +         +     +  TA         +L   +P+  ++    
Sbjct: 58  GRAAGAFEYVTGALWERLPRETEERASHIVEARTADWPSDDIGNLLWSRFPVSSSRIIDL 117

Query: 138 --SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 NR+ +E +VE+ G+++ VL  HL                 +   +QA+ + D +
Sbjct: 118 PGPDIENRKVIEAIVELGGRRLRVLGTHLALLP-------------TTRLKQARTIVDHL 164

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
           T      +P V+ GD N         + F      +    R PK    R    +      
Sbjct: 165 TGI--DHLPTVLGGDLN---------EWFPNGWVHSTLSCRLPKVHAPRTWPERVPI--A 211

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           P+D F   Q+                           SDH  ISID
Sbjct: 212 PLDRFYASQDVEIVARGTDAR------------AGVASDHRAISID 245


>gi|91792122|ref|YP_561773.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans
           OS217]
 gi|91714124|gb|ABE54050.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans
           OS217]
          Length = 379

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/375 (10%), Positives = 91/375 (24%), Gaps = 90/375 (24%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           ++  A ++R+ S N+                 S  +        + + +   AD+V  QE
Sbjct: 2   SSLEASQIRIASINLFNFIAPPDAYYDFENIYSQDQWAKKLAWFKAFFEENPADVVGFQE 61

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPL 130
           + S + +  +     +   ++                  A+A R   V    V       
Sbjct: 62  VFSPDELQSLMASLGYP-HFAVLDSAELIGDYVYKSPVVALASRFPIVEMALVTPAPQLC 120

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFL------------------- 170
                    + +R+ +   + +    +  V  +HLKS                       
Sbjct: 121 QHIGVLADFSFSRKPLRATLALPQIGLCDVYVVHLKSKRSDLGQGSELVTDLNGGADLMA 180

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------- 219
                  + +    ++ A      + +++ S  P ++ GDFN  ++              
Sbjct: 181 RQALGRVASNLQRATEAALLFHQIMLRRQNSSQPVILLGDFNDSLSSSALEAFKVTPKQI 240

Query: 220 ----------------------------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
                                              +          D       + D   
Sbjct: 241 YRADIEDKALKAMFEAQLTQALNHFCLFDSYDLHRHSVKLNQNLLQDEFESSASDADQEI 300

Query: 246 NANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIK------S 287
           + +  L +               +DY ++               + Y   D         
Sbjct: 301 SPSLKLDSWQRASTHYFGNTGSVLDYILVSSEFDASQNASLAEVVNYQTFDRHLVRPDYE 360

Query: 288 RGKRLSDHCPISIDY 302
           R    +DH P+ +  
Sbjct: 361 RDNMSTDHAPVMMTL 375


>gi|86742342|ref|YP_482742.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
 gi|86569204|gb|ABD13013.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
          Length = 356

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 78/288 (27%), Gaps = 64/288 (22%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
               A ++R++S N+   ++                    L    +  + D++ L E   
Sbjct: 128 APQGAARLRVMSANLLYYNDH----------------ADRLGAQIRAANPDVLVLVE--- 168

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 + P     +  S        +           AV  +       +  + GA   
Sbjct: 169 ------LSPLTLARVTSSGALASYRYREVHPEPGAFGAAVFSRFPLHDAAAPIVGGAMS- 221

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                    +   VE++ ++ +V+           +  + +      L  Q +       
Sbjct: 222 ---------LRATVEVDERRRFVVYAVHTISPTTSAYTDRWRTQLDTLRAQLE------- 265

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--RNK 254
               + +P V+AGDFN   ++          +                   +K+L     
Sbjct: 266 ---HATLPVVMAGDFNATRDHRPFRRLVNSGVRD---AHDVVGGGWQPTWNSKSLILPPV 319

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + ID+ +                  +     +  G   SDH P+  D 
Sbjct: 320 LRIDHVLASPA--------------FAVTGFEVGGDFGSDHRPVIADL 353


>gi|325954719|ref|YP_004238379.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
 gi|323437337|gb|ADX67801.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
          Length = 400

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/293 (11%), Positives = 70/293 (23%), Gaps = 44/293 (15%)

Query: 46  SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           + +R       + +    +  D       I+ L E+ +   +  +        +      
Sbjct: 111 TSQRYNQKVNNIARVLSEIGTDVTKVPPVIIGLCEIENSQNMIDIANSPFLNKY---NYG 167

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
           + H        +   +  +K    V   + YP+       SR   R  + +   ++G++I
Sbjct: 168 VVHFNSFDARGVDVGLMYQKDRFTVTYARPYPIFNYDKDGSRRYTRDILLVTGLLDGEEI 227

Query: 158 WVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
             L  H  S    + +       +  ++      LK      K      +  GDFN    
Sbjct: 228 SFLVNHWPSRSGGEKVSMPGRIEAAKVMRGIFDELKQ-----KNPNAKVIAMGDFNDDPV 282

Query: 217 YLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-- 269
                + F        +          K                  D F+   +      
Sbjct: 283 SPSIRNTFKAAADKSSVKEGGYYNPMTKLFKKGYGTLAYRDAWNLFDQFIFTASLVTKEN 342

Query: 270 -------------------LIQESFSEILYNEDDIKSR-GKRLSDHCPISIDY 302
                                   +    Y      +      SDH PI    
Sbjct: 343 DFSSYRIFKTEIFTRDYLITKDGQWKGTPYRMWSGDTYRADGYSDHFPIYTIL 395


>gi|313228884|emb|CBY18036.1| unnamed protein product [Oikopleura dioica]
          Length = 515

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/328 (10%), Positives = 92/328 (28%), Gaps = 49/328 (14%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +    ++      +   R      L+ +     DAD++ LQE+ +     
Sbjct: 182 FSVMCYNVLSDKYCTRQMYGYSPSWCLRWEHRQRLIFEEMFTYDADVLCLQEVETCEFNN 241

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              P+     +       + +K    ++       AI  + +   +L+            
Sbjct: 242 TFLPELRKHGYMGVFSPKSRAKTMIESESQNVDGCAIFWKTEKFLLLENHTFEFNQLAIK 301

Query: 138 SRAGNRRAVELLVEINGKKIWV-------------LDIHLKSFCFLDSLENTYSPSCSLL 184
           +  G++  +  ++  +   + V             + +      +     +       LL
Sbjct: 302 NSGGDQDILNRVMTKDNVAVAVVLKTMKGQEDTQEIVVCNTHMHWDPEFSDVKMIQTFLL 361

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------GNNDDFWKTIDPNDS- 233
           + +   +   +  +K + VP ++ GD+N   +              N   ++  + N   
Sbjct: 362 TTELDRVIRQM-GRKPTDVPVILCGDYNSLPSSGVTEFVKEGKVELNHPEFQRFNYNKKL 420

Query: 234 -----------------LIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESF 275
                               F    +     N     K  IDY      +     I    
Sbjct: 421 VKMNPKNGEVFWQFRFCFNLFSYLPELMPFTNYTYDFKGIIDYIYHSSPHLKTIGILGGL 480

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +               SDH  +  +++
Sbjct: 481 DDSYRRSVVGFPNPVIPSDHLCLLSEFE 508


>gi|229495737|ref|ZP_04389465.1| endonuclease/exonuclease/phosphatase [Porphyromonas endodontalis
           ATCC 35406]
 gi|229317311|gb|EEN83216.1| endonuclease/exonuclease/phosphatase [Porphyromonas endodontalis
           ATCC 35406]
          Length = 319

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 89/298 (29%), Gaps = 38/298 (12%)

Query: 26  LVSWNINTLSE--QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +WNI    +  +  +S   +S +R       + +  +    D++ +QE+ S   +  +
Sbjct: 37  IATWNIRGFGDLTRSWMSKEGDSPRRDLHSVHCIAEILRRF--DVIAIQEVKSN--IRAL 92

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV--------RVLQQSYPLLGAKD 135
                      +  L + ++  + N    A     + V         V+   +    +K+
Sbjct: 93  RDTLKILGDEWSMILTDVNQGSAGNGERMAYLFDTRRVNLSGLAGELVVPDEWRSGVSKN 152

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R    +      +   ++ +H+             S     L   AQWL  W 
Sbjct: 153 VMQEQFVRSPYAVSFRSKHQTFILVTLHVLYG-------KKSSDRIKELKGIAQWLSSWA 205

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                     +I GDFN +       D   +T          P+   S+  +     +  
Sbjct: 206 KDINAYHQNLIILGDFNIE----ARGDLLAETFLSEGLY--IPEGLQSKEVSRSIFNDTK 259

Query: 256 PIDYF--VMDQNAYKFLIQESFSEILYNEDDIKSRGK---------RLSDHCPISIDY 302
             D        N    L  E      Y+      + +          LSDH P+  ++
Sbjct: 260 FYDQIAWFNGSNGQPKLSLEFVRGGSYDFVATALKNRGLTKQKLSFMLSDHYPLWAEF 317


>gi|156095454|ref|XP_001613762.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148802636|gb|EDL44035.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 2718

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/385 (10%), Positives = 95/385 (24%), Gaps = 97/385 (25%)

Query: 15   PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
                +   +  +++WN+        E        +   +   T + Q   N   DIV LQ
Sbjct: 2333 STVTNPHNQFTIMTWNVLAEIYGTIEAFPHCDPYMLAWSYRKTKIIQEILNNSPDIVCLQ 2392

Query: 73   EMGSYNAVAKVFPKNTWCIFYSTERLI---------NHSKRDSNNDIHTAIAVRKKNVRV 123
            E+ + + +    P      +    +              +         AI   KK ++ 
Sbjct: 2393 EIQNEHFLDFFKPSLGEFGYEGVYKQKTKEIFTSPSGKRRGGKYTIDGCAIFYNKKKLKF 2452

Query: 124  LQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVLDIHLKSFCF------- 169
            ++            +             ++   +  +   + +L  +++ +         
Sbjct: 2453 VETYALEFSKLIKEASVFTLPKEIQKNPSLVKRLLKDNVALVILLEYIQQYSKMYEGKDD 2512

Query: 170  --------------LDSLENTYSPSCSLLSQQAQWLKDWIT-------QKKESLVPFVIA 208
                           ++       +  +   QAQ L   +        +K E++   +I 
Sbjct: 2513 DEEEEKPNKNLLIVANTHIVANPEANYVKIWQAQILVKVVEYLKINFIKKYETVPSLIIC 2572

Query: 209  GDFNRKINYL----------------------------------------GNNDDFWKTI 228
            GDFN   +                                            +    + +
Sbjct: 2573 GDFNSTPSSAVYQLIYKKTCSRSHEDFSSDKYSLLTDLPLGHNLNLKSAYAISKLLSQKL 2632

Query: 229  DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
            +P +               N        +DY   +      +   + ++      +    
Sbjct: 2633 NPEEYTSNLE--IFEPLFTNYTGNFIGCLDYIFYNDENLNIISTVNIADENQLMQEAHIY 2690

Query: 289  GK---------RLSDHCPISIDYDF 304
                       R SDH P+   ++F
Sbjct: 2691 QLSNCALPSPIRPSDHLPLIAKFEF 2715


>gi|221201880|ref|ZP_03574917.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M]
 gi|221207614|ref|ZP_03580622.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2]
 gi|221172460|gb|EEE04899.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2]
 gi|221178300|gb|EEE10710.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M]
          Length = 256

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +    +AD V +QE+       KV
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEI-------KV 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +   L ++    +      A    ++          ++G   S      R
Sbjct: 40  SADDLPAEFVAPHGLKSYFHHAAKKGYSGAGLYSRREP-----DDVIIGFGSSEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ V+ +++ S    D  +                L        +   
Sbjct: 95  Y-----VEARYGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAAL--------KKTR 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +  +   +   +  D R    
Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLSKLFDDVGYVDVFRTLDPRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +            S             +  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAATAKSTSI-----------FKDIKFSDHAPLT 250

Query: 300 IDYDF 304
           +DYD+
Sbjct: 251 VDYDY 255


>gi|145511051|ref|XP_001441453.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408703|emb|CAK74056.1| unnamed protein product [Paramecium tetraurelia]
          Length = 374

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/323 (15%), Positives = 87/323 (26%), Gaps = 90/323 (27%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL------Q 72
               K+++ SWNIN L              R +S       Y  + + DI+ L      Q
Sbjct: 100 FSQDKLKISSWNINGL--------------RASSKKESAVSYLNDKNFDIICLNELKVAQ 145

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E      +    PK+ +  + +  ++            ++ +A+  K   +  +    + 
Sbjct: 146 EAFEKENLITKLPKD-YFAYLNFCKIKA---------GYSGVAILSKVKPISIKYDMGIE 195

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWL 191
             D   R          +    +K  ++  ++ +    LD L                 L
Sbjct: 196 KHDQEGRI---------ITAEFEKFNLVACYVPNSGDKLDRLNYRTQEWDVDFQNYLDKL 246

Query: 192 KDWITQKKESLVPFVIAGDFNRKINY------------------------LGNNDDFWKT 227
           K             +I GD N                                 D F K 
Sbjct: 247 KQ--------TKNTIICGDLNVSHTEIDLANPEGNKRSAGQLIIYDQRFTQEERDSFSKF 298

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILY 280
           +                  +  + R           IDYFV++Q A   +IQ      + 
Sbjct: 299 LSKGWIDTFRHLHPKEIKYSYFSPRFNSRETNKGWRIDYFVVNQEAVGSVIQSDIKTTIL 358

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
                       SDH PI  D D
Sbjct: 359 -----------GSDHVPIECDID 370


>gi|83720785|ref|YP_440709.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
 gi|167579381|ref|ZP_02372255.1| exodeoxyribonuclease III [Burkholderia thailandensis TXDOH]
 gi|167617482|ref|ZP_02386113.1| exodeoxyribonuclease III [Burkholderia thailandensis Bt4]
 gi|257140643|ref|ZP_05588905.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
 gi|83654610|gb|ABC38673.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
          Length = 256

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 87/307 (28%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +               ++    +AD V +QE  + + +  A
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIKVSADDLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    + +  ++   +   +S     +       +              +G   S   A 
Sbjct: 47  EFVGPHGFRSYFHHAQKKGYSGAGLYSRREPDDVI--------------IGYGSSEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ ++ +++ S    D  +                L        +S
Sbjct: 93  GRY-----VEARFGKLSIVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KS 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N     +   +                +   +      +   +  DSR  
Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDSRPE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             R  + SDH P
Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKGTSI-----------FRDIKFSDHAP 248

Query: 298 ISIDYDF 304
           +++DYD+
Sbjct: 249 LTVDYDY 255


>gi|297194729|ref|ZP_06912127.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197722940|gb|EDY66848.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 343

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 86/300 (28%), Gaps = 72/300 (24%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L   L+  +A+    + + + N+N  +   G +                 +      A
Sbjct: 112 LNLFGGLLGESAATGGDLTIATHNVNADNPDPGGT----------------AEDVAAAGA 155

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ LQE+ +    A       +    S     +  +                    L  
Sbjct: 156 DVLALQELPAGQVTA-------YEEALSATYPHHAVEGTVG----------------LWS 192

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS 185
            YPL        R G  RA+   V   G  + V   H+ S    L +         S   
Sbjct: 193 KYPLTDTSPVDIRMGWTRAMRATVATPGGDVAVYVAHMPSVRVKLHAGFTANQRDNS--- 249

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             A  L + I +  E L   V+ GD N  +N         ++++   S +R  +      
Sbjct: 250 --ADALGEAIAR--ERLDRVVLLGDLNGTMND--------RSLNAVTSQMRSTQGAAGDG 297

Query: 246 NANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        ID  ++       +   S   +              SDH PI+   D
Sbjct: 298 FGFSWPAAFPMARIDQIMVRG-----VEPVSSWTLPRTN----------SDHLPIAARVD 342


>gi|118098153|ref|XP_425256.2| PREDICTED: similar to deoxyribonuclease I-like 2 short form [Gallus
           gallus]
          Length = 278

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 78/288 (27%), Gaps = 33/288 (11%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                +R+ ++NI             +S     S   ++    +    DIV +QE+   +
Sbjct: 18  PATAVLRIGAFNIQAFG---------DSKMSDESVADVIINILRRY--DIVLVQEVRDSD 66

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A            S+      S     ++         +   V               
Sbjct: 67  LSAVTELLEQLNSVSSSPYDYEISGPLGRDNYKEMYLFIYRTDAVSVVDTYQYEDP---Q 123

Query: 139 RAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              +R    L V     K    + + L S     +  +  +   +L       +  W   
Sbjct: 124 DIFSREPFVLRVSAPHSKAEEFVMVPLHS-----APHDAVAEIDALYDVYLAVVNKW--- 175

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   V  GDFN   +Y+  +D     +  +D       +         +       
Sbjct: 176 ---GTDNIVFLGDFNADCSYVKQSDWASIRLRSSDVFKWLIPDSADTTVGKSDCAY---- 228

Query: 258 DYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
           D  V+      + ++  S +   +       + + L  SDH P+ +  
Sbjct: 229 DRIVVCGAKLKRSIVPNSATVYNFQRAFQLEQEEALAVSDHYPVEVKL 276


>gi|13472526|ref|NP_104093.1| hypothetical protein mlr2853 [Mesorhizobium loti MAFF303099]
 gi|14023272|dbj|BAB49879.1| mlr2853 [Mesorhizobium loti MAFF303099]
          Length = 246

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 82/276 (29%), Gaps = 53/276 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + S+N++     +              D     +  + +D D++ LQE  +         
Sbjct: 19  VASYNVHKCIGVDRKF-----------DPERTSRVIREIDPDVIALQEADNRFGDRDGLL 67

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   +    +  S     +  H  + + KK V        L G          R A
Sbjct: 68  DLPRLERETGLVPVPISATGKGHGWHGNVLLFKKGVVRDVHQIRLPGL-------EPRGA 120

Query: 146 VELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           V   +E+NG + + ++  HL                    SQQA+ + D ++       P
Sbjct: 121 VVAEIELNGSETLRIIAAHLGLLRHS-------------RSQQARVVLDLMS--SPDEKP 165

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GD N         +         ++L      +        +    + +D  + ++
Sbjct: 166 TLLLGDLN---------EWRLGNRSALNTLHATFGPQPPAVPTFPSNLPLLALDRIMTNR 216

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +            I   E       +  SDH P++ 
Sbjct: 217 HGM----------IAAVEAHDTPLSRVASDHLPLTA 242


>gi|15600681|ref|NP_254175.1| hypothetical protein PA5488 [Pseudomonas aeruginosa PAO1]
 gi|107104590|ref|ZP_01368508.1| hypothetical protein PaerPA_01005669 [Pseudomonas aeruginosa PACS2]
 gi|116053638|ref|YP_793965.1| hypothetical protein PA14_72430 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894591|ref|YP_002443461.1| putative hydrolase [Pseudomonas aeruginosa LESB58]
 gi|254237831|ref|ZP_04931154.1| hypothetical protein PACG_03928 [Pseudomonas aeruginosa C3719]
 gi|254243040|ref|ZP_04936362.1| hypothetical protein PA2G_03828 [Pseudomonas aeruginosa 2192]
 gi|296392353|ref|ZP_06881828.1| putative hydrolase [Pseudomonas aeruginosa PAb1]
 gi|313111571|ref|ZP_07797370.1| hypothetical protein PA39016_003370046 [Pseudomonas aeruginosa
           39016]
 gi|9951822|gb|AAG08873.1|AE004961_8 hypothetical protein PA5488 [Pseudomonas aeruginosa PAO1]
 gi|115588859|gb|ABJ14874.1| putative hydrolase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169762|gb|EAZ55273.1| hypothetical protein PACG_03928 [Pseudomonas aeruginosa C3719]
 gi|126196418|gb|EAZ60481.1| hypothetical protein PA2G_03828 [Pseudomonas aeruginosa 2192]
 gi|218774820|emb|CAW30638.1| putative hydrolase [Pseudomonas aeruginosa LESB58]
 gi|310883872|gb|EFQ42466.1| hypothetical protein PA39016_003370046 [Pseudomonas aeruginosa
           39016]
          Length = 292

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 79/294 (26%), Gaps = 62/294 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFL 71
               ++RL+S+NI      E    +     +         ++   + +     D D+V L
Sbjct: 30  PDDGRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLA--DYDLVAL 87

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSY 128
           QE    +  +    +                   +   I      +  R +   +     
Sbjct: 88  QEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIAQHSNGLLSRWRPTLLEDHPL 147

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           P             R A+ +        + V+ +HL                    ++Q 
Sbjct: 148 PGPPG---------RGAIFVRFGEGADALVVVMMHLALG-------------ARTRTRQL 185

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            ++++ I          V+ GD N               +  N  L              
Sbjct: 186 AYIRELIGDY----RHQVLMGDMNTHAVD----------LLENSPLRDLGLMAPQVEATF 231

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + R +  +D+ ++  +     +                  + +SDH P+S++ 
Sbjct: 232 PSWRPQRNLDHILLSSDLALERVDV--------------LDQPISDHLPVSVEI 271


>gi|315917346|ref|ZP_07913586.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691221|gb|EFS28056.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 269

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 92/299 (30%), Gaps = 54/299 (18%)

Query: 22  QKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +K++L++ N++  L             ++      LL +       D++ LQE+      
Sbjct: 3   KKMKLLTINVHSWL------------EEKQEEKMELLAKVIAEKRYDVIALQEVNQKIEA 50

Query: 81  AKVFPKNTWCIFYS------------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             +  +     F                           +     IA+  ++  + ++ +
Sbjct: 51  RLLKGEIREDNFLYQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDF 110

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               +K  +S + +R+ V++ +EI GK+I     H+     ++        +        
Sbjct: 111 YCTNSKTVYSIS-SRKIVKIFLEIEGKEIEFYSCHMNLPDCIEENMEQNIQN-------- 161

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                 I +        ++ GDFN     +         + +  + +L +   +  +   
Sbjct: 162 ------ILKHSSRNCLKILMGDFNTDAFHDESSYQKILEQGLFDSYTLSKKKDDGVTVYK 215

Query: 247 ANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 N +    +DY  + +          F+   Y           +SDH  + +  
Sbjct: 216 NISGWENSVEEKRLDYIFLTEQYEVESSYVIFNGKNYPC---------ISDHNGLEVIL 265


>gi|203284438|ref|YP_002222178.1| exodeoxyribonuclease III [Borrelia duttonii Ly]
 gi|201083881|gb|ACH93472.1| exodeoxyribonuclease III [Borrelia duttonii Ly]
          Length = 254

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 78/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + L+SWN+N +                         +      DI+ LQE  +       
Sbjct: 2   MNLISWNVNGIRAVSNKGF---------------LNFIAEYSPDILCLQETKALKEQLPR 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  ++S           S    ++ +A+  K   +      L           
Sbjct: 47  ELIDIEGYYSYFSK----------SIIKGYSGVAIYSKIEPI-----KLENMNIEIFDRE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +      +     +++ +  +         +     +   +    L+        S
Sbjct: 92  GRCIIA-----HYHDFILINAYFPN-------SQSLRKRLNYKLEFLMSLESIANSFVTS 139

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GDFN     +                   +     ++           K+   
Sbjct: 140 GKNLIVCGDFNIAHTEIDLSNPKTSRESAGFYVEETNWMDNFLNRGYVDTFRMFNKEPGN 199

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + + +         IDYFV+++     +        +             SDHCP+
Sbjct: 200 YTWWDYKTRARERNVGWRIDYFVINKAFQSKVKDALILNKV-----------MGSDHCPV 248

Query: 299 SIDY 302
            +  
Sbjct: 249 FLKL 252


>gi|75759165|ref|ZP_00739268.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74493327|gb|EAO56440.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 267

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 22  EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 81

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 82  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTLAYNGKDITF 140

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 141 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLKG 186

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 187 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQ---------S 237

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 238 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 266


>gi|107024036|ref|YP_622363.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054]
 gi|116691123|ref|YP_836746.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424]
 gi|170734454|ref|YP_001766401.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3]
 gi|254246884|ref|ZP_04940205.1| AP endonuclease, family 1 [Burkholderia cenocepacia PC184]
 gi|105894225|gb|ABF77390.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054]
 gi|116649212|gb|ABK09853.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424]
 gi|124871660|gb|EAY63376.1| AP endonuclease, family 1 [Burkholderia cenocepacia PC184]
 gi|169817696|gb|ACA92279.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3]
          Length = 257

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 84/307 (27%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +                +    +AD V +QE  + + +  A
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEIKVSADDLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    + +  ++       +S     +       +              +G   S     
Sbjct: 47  EFVEPHGFKSYFHHAEKKGYSGAGVYSRREPDDVI--------------IGFGSSEFDPE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ V+ +++ S    +  +       +        L        + 
Sbjct: 93  GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMAEFMPHLAAL--------KK 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N     +   +                +   +  +   +   +  D R  
Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEEREWLTKLFDDVGYVDVFRTLDQRPE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             +  + SDH P
Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSTSI-----------FKDIKFSDHAP 248

Query: 298 ISIDYDF 304
           ++IDYD+
Sbjct: 249 LTIDYDY 255


>gi|319947397|ref|ZP_08021629.1| exodeoxyribonuclease [Streptococcus australis ATCC 700641]
 gi|319746337|gb|EFV98598.1| exodeoxyribonuclease [Streptococcus australis ATCC 700641]
          Length = 275

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+         +   R      +L       +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNA-----ALTSDSARAKLSQDVLLTLVAE-NADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S  +     +       K     + ++P +GA  S      R
Sbjct: 55  KHLEVLEELFPGYENTWRSSVEPARKGYAGTMFLYKKELTPRVTFPEIGAP-STMDVEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +               +  +     L            
Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLEERQIWDAKYADYLAELDQ--------QK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        +  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDLPDQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + + +  +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSAMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VMEID 274


>gi|120556472|ref|YP_960823.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8]
 gi|120326321|gb|ABM20636.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8]
          Length = 286

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 78/286 (27%), Gaps = 56/286 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +RL+++NI           +            R   +   +         D+V LQE   
Sbjct: 38  IRLLTFNIQVGINTSSYHHYLTRSWQHFLPNRRRYENLDRIATLLSQY--DVVALQECDG 95

Query: 77  YNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +  +    +  +    +          R+       +  +  +   +    + L G   
Sbjct: 96  GSLRSGYINQVQYLAEAAGIPYWYQQLNRNLGQIAQHSNGLLSRFRPLDVTEHKLPGL-- 153

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A+          + ++ +HL                      Q + L  +I
Sbjct: 154 ----IPGRGAIIARYGDEEDPLVLVLMHLSLSKSA----------------QQKQL-GFI 192

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            ++  S    V+ GD N               +   D +           ++  + R + 
Sbjct: 193 REQIASYRHVVLMGDMNA----HAEQLLTRTPLKETDLIPL-----PDTAHSFPSWRPEK 243

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +D+ ++  +      +                   +SDH PI++D
Sbjct: 244 ALDHILVSPSLEIRRSEVV--------------SYPVSDHLPIAMD 275


>gi|332823050|ref|XP_518271.3| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Pan troglodytes]
          Length = 392

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 82/287 (28%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WNI+ L                +     +  Y      D++FLQE+         
Sbjct: 144 FSLITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV--------- 183

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +                   TAI ++K  V++  Q      +         R
Sbjct: 184 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 236

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S                    Q + +   + +      
Sbjct: 237 NLLCVHVNVSGNELCLMTSHLEST----------RGHAVERMNQLKMVLKKMQE-APESA 285

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 286 TVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 345

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 346 DRIFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389


>gi|307719602|ref|YP_003875134.1| hypothetical protein STHERM_c19260 [Spirochaeta thermophila DSM
           6192]
 gi|306533327|gb|ADN02861.1| hypothetical protein STHERM_c19260 [Spirochaeta thermophila DSM
           6192]
          Length = 256

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 83/306 (27%), Gaps = 80/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           + + SWN+N +                 +    L ++ +    +I+ LQE  +      +
Sbjct: 2   ISVYSWNVNGIRA---------------AAKKGLLEWIEKERPEILCLQETKARKDQLPS 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++   + +  +++      +S                  +  L +   +           
Sbjct: 47  ELARPDGYHTYWAEADKPGYSGVA---------------LFTLHEPASVEPLGVDEFDRE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  + +   + D +  +     +  +     C+        +K+       +
Sbjct: 92  GR-----TLIADFRSFVLFDCYFPNSQEAGARLDYKLAYCN-------AVKERADAYVAA 139

Query: 202 LVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               +I+GDFN                   YL    ++      +  +  F        +
Sbjct: 140 GRHVLISGDFNIAHTPLDLARPEANEKNPGYLPEEREWMTYFLSSGYVDTFRMFTKEGGH 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY  +D+     + +               +    SDHCP
Sbjct: 200 -YTWWTYRFKAREKDIGWRIDYHCVDERFKDKVKESVIL-----------KDVMGSDHCP 247

Query: 298 ISIDYD 303
           + I  D
Sbjct: 248 VKITLD 253


>gi|302562602|ref|ZP_07314944.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus
           Tu4000]
 gi|302480220|gb|EFL43313.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus
           Tu4000]
          Length = 278

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 69/275 (25%), Gaps = 49/275 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA----- 79
           R+++WN+                    SD              ++ LQE  + +      
Sbjct: 47  RVMTWNLCN--------------PCEESDVDR-AAEIARHAPQVIALQEACARDVERIRD 91

Query: 80  -VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +  +        + +  R                 AV        +             
Sbjct: 92  HLESLHGLVYHVEYGTVLRNWGRCGGAPWKPGAFGQAVLSAAPMTDRVLVEYPDGG---- 147

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            + +R  + +  E+ G+ + V + HL                  + + QA  L + + + 
Sbjct: 148 -SEDRGYMAVTTEVGGRSVRVFNTHL-----------AERRQEEVRAGQAGVLAEAVARH 195

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    ++ GDFN            W+  +  D   R        C    +       D
Sbjct: 196 DRA----IVLGDFNAVPYAPELAR-MWELAEDADPRCRPSDA--GTCEPTTDWN--SKFD 246

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           Y  +   A             Y++  +       S
Sbjct: 247 YVFLRGIAPLR---HHVEHTRYSDHHLLRTDLAPS 278


>gi|296138677|ref|YP_003645920.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
 gi|296026811|gb|ADG77581.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
          Length = 272

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 73/285 (25%), Gaps = 60/285 (21%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKR 104
            +R+  +  +L  + +   AD+V LQE+      ++A + P        S          
Sbjct: 16  KQRSEENLGML-PWLRETKADVVALQEVRATHKQSLAALAPALDEGWHLSAAE------- 67

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
            S+      +AV  +      +        D   R          +E +   + V  ++L
Sbjct: 68  -SSTAGRNGVAVLSRREPDAVRIGFGSAEFDETGRY---------LEADFGDLTVGSLYL 117

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------- 217
            S       ++                 +++          V+ GD+N            
Sbjct: 118 PSGDVGTERQDEKDRFR-------AEFGEYLGTLGRRRRKAVVCGDWNIGHTELDIKNWK 170

Query: 218 ---------LGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNK---------IPID 258
                              I          +E              +           ID
Sbjct: 171 GNVKNSGFLPEERAWMSTYIGAGRPFTDVVRELHPGTPGPYAWWSWRGKAFDNDSGWRID 230

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +    +              +  ++   R SDH P++++Y 
Sbjct: 231 LQIANNALAQHATAA-------RVERAEAYSLRWSDHAPVTVEYS 268


>gi|239816655|ref|YP_002945565.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110]
 gi|239803232|gb|ACS20299.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110]
          Length = 346

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/325 (12%), Positives = 95/325 (29%), Gaps = 52/325 (16%)

Query: 23  KVRLVSWNINTLSEQ---EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            + + + N+  L+        +      +          +    L+AD++ +QE+   +A
Sbjct: 10  TLFVATCNLLNLANPHRLYYENQDAYDEREYERKIAWTGERFHALNADVLAVQEVWDESA 69

Query: 80  VAKVFPKNTWCIFYSTER-----------LINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           +     ++     + +                 ++  +       IA R +   V     
Sbjct: 70  LKAAIARSGLRYDFVSVPGAENTPPPASPPGTPARPGAQGTPRVGIATRLQVDEVRSFVD 129

Query: 129 PLLG-----AKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFL------------ 170
              G               R  +   + + +G+++ VL +HLKS                
Sbjct: 130 FPPGFGVEVPGLGPHTRFERPPLLATLRMKHGQQVHVLTVHLKSKRPKFLQDAQGHALED 189

Query: 171 ----DSLENTYSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKINY-------L 218
                        S  +   +A  L+   I   + +  P V+ GDFN   +         
Sbjct: 190 REDRKVGVMASLRSLVMRGVEAAALRCIVIDLLQGTNTPLVVMGDFNDDPHSVTTQLVAA 249

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNA---YKFL 270
            +   + K          +  + +S        ++ +      +D   + +      +  
Sbjct: 250 TSEVAYDKAARDVALFNAYEMQGESALKKDVAYSHIHQGFPAVLDQIFVSEEFVATSRRS 309

Query: 271 IQESFSEILYNEDDIKSRGKRLSDH 295
           + +      +N+   + R +  SDH
Sbjct: 310 LGDVRRVDYFNDHLHEGRDRSRSDH 334


>gi|326790116|ref|YP_004307937.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
 gi|326540880|gb|ADZ82739.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
          Length = 266

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 90/298 (30%), Gaps = 53/298 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79
           +R+++ N +               +      + L +  K  D DI+ LQE+    A    
Sbjct: 1   MRILTLNTH-----------SWREENQEEKMSYLAEIIKERDYDIIALQEINQSTASPYL 49

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI---------AVRKKNVRVLQQSYPL 130
             +   ++ + +            + ++    + +         A+  K        + +
Sbjct: 50  QDRHLRRDNFMVVLQQLIEKIGGPKYNSFWDLSKVVRDEYEEGSAILCKMPITHTSCFTV 109

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             ++D       R+ V++ V    ++I +   HL            +         Q   
Sbjct: 110 SKSRDR-DDVKARKIVKVTVTYKEQEIDLYSCHLGW----------WHDEIEPFEYQCDR 158

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L + +     S    ++ GDFN   N      D+       D+ I   ++        + 
Sbjct: 159 LVEEMD----SDKLSLLMGDFNNNANLREEGYDYLIDKGFYDTYILAGEKDQGVTVQGEI 214

Query: 251 LRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              K       ID  ++++       +  F+               +SDH  + ++ +
Sbjct: 215 AGWKGNKVGLRIDLILVNKTLTVKSSKVIFN---------GDYKNVVSDHYGVEVELE 263


>gi|218781643|ref|YP_002432961.1| exodeoxyribonuclease III Xth [Desulfatibacillum alkenivorans AK-01]
 gi|218763027|gb|ACL05493.1| exodeoxyribonuclease III Xth [Desulfatibacillum alkenivorans AK-01]
          Length = 253

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 79/306 (25%), Gaps = 80/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++ VSWN+N +   E                       K+ +ADI+ +QE  +       
Sbjct: 2   LKFVSWNVNGIRAVEKKGF---------------TDMVKDFNADILAIQETRALKEQLSE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +  ++ +     +S                                     + 
Sbjct: 47  DLINIADYTSYWFSAEKKGYSGVSVYTKQ-------------------TPLDVMYGMDSP 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A   ++ +     ++++++  +        +        L + A  L          
Sbjct: 88  EHDAEGRVITLEYDDFYLMNVYFPNAQPKLVRLDWKLGFNQTLHKFANAL--------GE 139

Query: 202 LVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               V+ GD+N                   Y      +      +  +  F        +
Sbjct: 140 KKSVVLCGDYNVAHKPIDLANPKQNEQNPGYSPEERAWMDEFIGSGYVDAFRMFNQEP-D 198

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF +D+ +   +        +             SDHCP
Sbjct: 199 NYTWWSYRFNARAKNIGWRIDYFCVDEKSKGRVKNAEILNEV-----------MGSDHCP 247

Query: 298 ISIDYD 303
           +S+D++
Sbjct: 248 VSLDFE 253


>gi|159185011|ref|NP_354980.2| hypothetical protein Atu2011 [Agrobacterium tumefaciens str. C58]
 gi|159140285|gb|AAK87765.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 319

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 75/293 (25%), Gaps = 59/293 (20%)

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK------KNVRV 123
            LQE+ +  A+        + +  +        + + +  I  A+ +R+      K   V
Sbjct: 25  CLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGNDSRGIDVAVVMREETRDGDKIEVV 84

Query: 124 LQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
             +S+  L  ++                +   R  +E+ + I GK + +   H KS    
Sbjct: 85  DIKSHAALTYRNLDLFNPALAATNQIDDKIFKRDCLEIDLRIGGKPLTLYVTHFKSMTNA 144

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFNRKINY--------- 217
               +    +  +   +A  ++  I  +          F I GD N              
Sbjct: 145 RDAVDARIATMPIREAEAMAVRRIIENRWGVGNTRNKNFAICGDMNDYQERVAISGDRRS 204

Query: 218 -------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQN 265
                                  +    +          + R         +DY  +   
Sbjct: 205 GYSFTPVEEERSALDIFTADGFVVNPMTRRDVMDRWTLYHSRGPQEQHLCQLDYVWLSPR 264

Query: 266 AYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCPISIDYD 303
             +         I               +           + SDHCP+ +  D
Sbjct: 265 LAETSATHVPEIIRNGQPFRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLD 317


>gi|21388714|dbj|BAC00811.1| DNase I [Cyprinus carpio]
          Length = 279

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 95/307 (30%), Gaps = 36/307 (11%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            K + A+   LV     +   + + ++NI +           +S     +   ++ +   
Sbjct: 1   MKIITAIGLLLVSV--HLGHSLLIGAFNIKSFG---------DSKASNATLLDIITKVVH 49

Query: 63  NLDADIVFLQEMGSYN--AVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               DIV +QE+   +  A  K+    N     Y  + +++     S          R++
Sbjct: 50  RY--DIVLIQEVRDSDLTATNKLMQSVNGGSSPYEYQYIVSEPLGRSTYKERYLFIYRRQ 107

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            V V        G +   +   NR    ++   N        +  +              
Sbjct: 108 AVSVANSFQYDDGCESCGTDTFNREPFVVMFSSNTAVQQKFALVPQHTSP---------- 157

Query: 180 SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
              +   +   L D +   ++  +    ++ GDFN   +Y+ N+D     +  + S    
Sbjct: 158 --EVAVTEIDALHDVVLDTRQRLNTNNIMLLGDFNAGCSYVSNSDWSKIRLRTDQSYTWL 215

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295
             +       + N       D  V   +  K +   S     + +    S+   L  SDH
Sbjct: 216 IPDSADTTVTHTNCPY----DRIVATSDMMKGVSAGSAQVFDFMQAHGLSQSWGLAVSDH 271

Query: 296 CPISIDY 302
            P  +  
Sbjct: 272 FPAEVQL 278


>gi|196001943|ref|XP_002110839.1| hypothetical protein TRIADDRAFT_12445 [Trichoplax adhaerens]
 gi|190586790|gb|EDV26843.1| hypothetical protein TRIADDRAFT_12445 [Trichoplax adhaerens]
          Length = 451

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 79/319 (24%), Gaps = 48/319 (15%)

Query: 22  QKVRLVSWNINTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             +R+VS+NI +     +          R +    L+       +ADI+ LQE       
Sbjct: 141 GDLRIVSYNILSSGYSNDVFRYCNPRYLRYSYRLPLIIDELVGYNADIICLQECD----- 195

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--------------- 125
            ++          +     NH  + +      A+   +   ++L                
Sbjct: 196 KELLQNVILPAMRTHGYSGNHIFKKAEVKEGLALLYNRSKFQLLSLHTFALRDLLLKDES 255

Query: 126 -----QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                +                  A+  +         +  I          L       
Sbjct: 256 LGHLAKQIKKHPQLKRKCVNLPNVAMACVFRWREAPNKLFCIGNTHLYANPMLPEVRLVQ 315

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------------GNNDDF 224
            S++  Q     + I  K   ++P ++ GDFN   N                      D 
Sbjct: 316 ASVVLHQL----NLIRNKFTDVLPILLCGDFNSIPNSNVYQLLTTHQKHQKHFFPTTADR 371

Query: 225 WKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEILYNE 282
           WK ID                   N        +DY   ++          F +E     
Sbjct: 372 WKPIDLVLDNAFDFYSLCGIPQFTNYVQDFVGTLDYIFGEKEYVDVKQVVPFPTEDEIKR 431

Query: 283 DDIKSRGKRLSDHCPISID 301
           D         SDH  +  D
Sbjct: 432 DKALPSPNAPSDHLALVCD 450


>gi|293115606|ref|ZP_05792271.2| exodeoxyribonuclease III [Butyrivibrio crossotus DSM 2876]
 gi|292809044|gb|EFF68249.1| exodeoxyribonuclease III [Butyrivibrio crossotus DSM 2876]
          Length = 237

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 68/269 (25%), Gaps = 63/269 (23%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            +  ++DADI  LQE+       +   +N +  +             +    ++  AV  
Sbjct: 7   DFFDSVDADIFCLQEIKLSEGQIEWNKENYYSYW-----------NYAEKKGYSGTAVFS 55

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +  +    +   D   R         ++ +  +  +++ ++  +     +      
Sbjct: 56  KEKPLSVKYGIGIDEHDHEGR---------VITLEFENFYMVTVYTPNSQRELTRLEYRM 106

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDD 223
                       L+           P V+ GD N                          
Sbjct: 107 KWEDDFRNFLNDLRK--------TKPVVVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERQ 158

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQES 274
               +  +  +  F                            IDYF+  +     LI   
Sbjct: 159 KMTELLDSGFIDTFRYFYPDVEQKYSWWSYMFKSREKNAGWRIDYFLASKELEDRLISAE 218

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +             SDHCPI +  D
Sbjct: 219 IHDKVL-----------GSDHCPIELVID 236


>gi|293376523|ref|ZP_06622751.1| exodeoxyribonuclease III [Turicibacter sanguinis PC909]
 gi|292644749|gb|EFF62831.1| exodeoxyribonuclease III [Turicibacter sanguinis PC909]
          Length = 251

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 76/303 (25%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                         + +    D + +QE          
Sbjct: 1   MKFISWNVNGLRACVKKGF---------------LDFVEAEQPDFLCVQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++           +    ++  A+  K+  +       +   D   R    
Sbjct: 45  LQLDGYYQYWN----------YAVKKGYSGTAIFTKHEPLQVTYGLNIAEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +     +  +               L            
Sbjct: 91  -----VITLEYNDFYLVTVYTPNSQNELARLDYRLTWEEAFRNYLIGLDVL--------K 137

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +   +                    +  +  +  F     ++ N  
Sbjct: 138 PVIVCGDLNVAHQQIDLKNPKTNTKNAGFTIEERNEMTKLLNSGFIDTFRYFYPTKENCY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  +     L           ED         SDHCP+ 
Sbjct: 198 SWWSYRAGARAKNVGWRIDYFITSKALESRL-----------EDARIYPDVLGSDHCPVG 246

Query: 300 IDY 302
           +  
Sbjct: 247 LQL 249


>gi|239916907|ref|YP_002956465.1| putative glutamate--cysteine ligase/putative amino acid ligase
           [Micrococcus luteus NCTC 2665]
 gi|281414638|ref|ZP_06246380.1| putative glutamate--cysteine ligase/putative amino acid ligase
           [Micrococcus luteus NCTC 2665]
 gi|239838114|gb|ACS29911.1| putative glutamate--cysteine ligase/putative amino acid ligase
           [Micrococcus luteus NCTC 2665]
          Length = 902

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/352 (12%), Positives = 88/352 (25%), Gaps = 75/352 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSE----------------------QEGVSLWKNSVKRTTS 52
               +V   V + S+N+                              +    ++ +    
Sbjct: 488 AAPETVGGNVTVGSFNVLNYFTTLGQDVAGCSTYRDRAGTPVTTNGCLPRGAHTPEAFAR 547

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYN---------------AVAKVFPKNTWCIFYSTER 97
               +      LD  +V L+E+ +                 A+     +  W    S   
Sbjct: 548 QQEKIAAAINGLDTSVVALEEIENSEKFGLDRDHALAHLVEALNAQAGEQRWAFVASPAA 607

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN-----RRAVELLVEI 152
               +  D    I +A   +   V  + +S  L    +  +         R A    V  
Sbjct: 608 RPALADEDV---IRSAFIYQPAEVTPVGESVILDDQTNFDNAREPMAQLFRAADGTSVGA 664

Query: 153 NGKKIWVLDIHLKSFCFLDSLENT------YSPSCSLLSQQAQWLKDWITQKKESL--VP 204
            G +   +  H KS     +  +            +    QA+ L  +  + K       
Sbjct: 665 AGTEFVAITNHFKSKGGSGATGDNVDTGDGQGAYNADRVGQAEALVAFAERMKAETGTDR 724

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GDFN             + ++         +   +   +         +D      
Sbjct: 725 VLLMGDFNSYEKEDPI-----RVLEAAGY---VSQGALTGEYSYAFGGAVGSLDGIYASP 776

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGK--------------RLSDHCPISIDY 302
           +A   +  +    I  NE       +              R SDH PI +  
Sbjct: 777 SAAAAISGQDIWMINANESVALEYSRHNYVAEDLYSADQWRSSDHNPILVGL 828


>gi|70945553|ref|XP_742583.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56521649|emb|CAH81668.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 752

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/387 (11%), Positives = 90/387 (23%), Gaps = 98/387 (25%)

Query: 16  CTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
              +   +  +++WNI        E  S     +   +   T + Q   N   DIV LQE
Sbjct: 363 NFPNTTNQFTVMTWNILAEIYGTVEAFSHCDPYMLSWSYRKTKIIQEILNHRPDIVCLQE 422

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLI---------NHSKRDSNNDIHTAIAVRKKNVRVL 124
           + + + +    P      +    +              K         AI   KK  + +
Sbjct: 423 IQNEHFLEFFKPCLNQYEYQGVYKQKTKEIFTSPSGKHKGGKYTIDGCAIFYNKKKFKFV 482

Query: 125 -------QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                   +                  A+   +  +   + +L  ++++    ++     
Sbjct: 483 EIYALEFSKLIKEGSVISLPKEVQKNPALSKGLLKDNIALVLLLEYVQNNKTYEAENYEN 542

Query: 178 SPSCSLL------------------SQQAQWLKDWIT-------QKKESLVPFVIAGDFN 212
                 +                    Q Q L   I        QK E +   +I GDFN
Sbjct: 543 EKDKKKMVIVANTHIIANPEATYVKIWQTQILVKVIEYLKINFIQKYEIIPSMIICGDFN 602

Query: 213 RKINYLGN------------------------NDDFWKTIDPNDSL-------------- 234
              N                                   ++   +               
Sbjct: 603 STPNSAVYQLLYKKKCCRTHNDLNSDEHGLLEYLPMSHNLNLKSAYAISNFLSQTISSEE 662

Query: 235 --------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                        ++      N        +DY   +      +   +  +      + +
Sbjct: 663 SINNIIINNTIDLDRFEPAFTNYTSNFIGCLDYIFYNDEDLNIISTVNIPDENQLIQESQ 722

Query: 287 SRGK---------RLSDHCPISIDYDF 304
                        R SDH P+   ++F
Sbjct: 723 VYHLPTSALPSPIRSSDHFPLVAKFEF 749


>gi|169833563|ref|YP_001695212.1| exodeoxyribonuclease III [Streptococcus pneumoniae Hungary19A-6]
 gi|168996065|gb|ACA36677.1| exodeoxyribonuclease III [Streptococcus pneumoniae Hungary19A-6]
          Length = 275

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|167758256|ref|ZP_02430383.1| hypothetical protein CLOSCI_00594 [Clostridium scindens ATCC 35704]
 gi|167664153|gb|EDS08283.1| hypothetical protein CLOSCI_00594 [Clostridium scindens ATCC 35704]
          Length = 367

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 101/320 (31%), Gaps = 64/320 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
                ++++NI               G  +   S K    + + +    K+ +ADI FLQ
Sbjct: 65  GDAFTILTYNIGYAGLSKDEDFFMDGGSKVEPESKKLVEENLSGITSILKDQEADIYFLQ 124

Query: 73  EMGSYNAVAKVFPKNTWCIF---------------YSTERLINHSKRDSNNDIHTAIAVR 117
           E+   +  +    +  +                  +    L    K  S     T + V+
Sbjct: 125 EVDRDSKRSYHIDEQAYYEEELGLAGMFACNFKCDFVPYPLPPIGKVTSGLVTMTDLNVK 184

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           + +   L +S+       +  R        + +E   K++ +++ HL+++          
Sbjct: 185 EASRISLPESFSWPVKTCNLKRCMLEA--RVPLEGTDKELVLINFHLEAY---------- 232

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----NYLGNNDDFW-----KTI 228
             S      Q++ L + +  + +     +  GDFN+       Y  +N D W        
Sbjct: 233 -DSGEGKIAQSKMLAEKLESEYQKGNYVIAGGDFNQTFEGMEKYPIHNKDKWVPGVVGAE 291

Query: 229 DPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
           D  +       +    C         N +      +D F++  N     ++   ++  Y 
Sbjct: 292 DIPEGFSFAVSDNVPTCRLLDGPYSGNYDESQVYVLDGFIVSDNIKVNRVENIDTDFEYT 351

Query: 282 EDDIKSRGKRLSDHCPISID 301
                       DH P+ ++
Sbjct: 352 ------------DHQPVRME 359


>gi|116694965|ref|YP_729176.1| extracellular nuclease [Ralstonia eutropha H16]
 gi|113529464|emb|CAJ95811.1| predicted extracellular nuclease [Ralstonia eutropha H16]
          Length = 344

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/319 (10%), Positives = 80/319 (25%), Gaps = 48/319 (15%)

Query: 22  QKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + + + ++N+  L+             S K             K +DAD+V  QE+   +
Sbjct: 4   KTLSIATFNLYNLNVPGLPLYTDRNGWSEKEYERKIAWTASQLKLIDADVVGFQELWHGD 63

Query: 79  AVAKVFP----KNTWCIFYSTERLINHSKRD--SNNDIHTAIAVR-----KKNVRVLQQS 127
            +          + + +                    +    A       +K V   +  
Sbjct: 64  GLLAAVEAAGLADAYDVLVPDNANGKGIVCAAIVRRGLLAGEAEWIADFPEKFVLKSKGD 123

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSP---- 179
            P         R  +R  +   +          ++V     K    +D            
Sbjct: 124 DPQTPQISVSIRGFSRPVLHFTIRPREDEPAMHMYVCHFKSKQPTRIDGEAWYEKEIYAK 183

Query: 180 ---------SCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWK--- 226
                    S    + +A  L+  +    K +    V+ GD N        N    +   
Sbjct: 184 HAKAVGAALSTIRRTAEAAALRFMLTDSMKGNNTAVVVMGDINDGQLSNTANILTEQPAY 243

Query: 227 ---TIDPNDSLIRFP-------KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                     +  +        ++       +     +  +D+ ++ +            
Sbjct: 244 LVGDSVGGGDIALYTAQTLQEYRDTRDVYYTHVFQDFRESLDHILVSEQL---YDNSKRR 300

Query: 277 EILYNEDDIKSRGKRLSDH 295
             L++   I +     SDH
Sbjct: 301 RWLFDGLIINNDHLNFSDH 319


>gi|322696490|gb|EFY88281.1| Endonuclease/Exonuclease/phosphatase family protein [Metarhizium
           acridum CQMa 102]
          Length = 325

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 82/293 (27%), Gaps = 26/293 (8%)

Query: 20  VAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGS 76
               VRL+S+NI    +E E     +    R     + +R      ++  V LQE     
Sbjct: 45  ATMPVRLISFNIRYAANEDERALAEQPWDVRCPKVCSQMRFITAGHESPFVCLQESLYSQ 104

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            N +     +  W                S     +  A   +       S         
Sbjct: 105 LNDIQAELGEP-WAHIGRGREEGETDGEFSPIFYRSD-AWACELSETRWLSKTPEKPSRG 162

Query: 137 FSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +  A NR     L     NG K+ V+  H     F          S  LL + A    +W
Sbjct: 163 WDAALNRIVTIGLFSHRANGTKVVVMSTH-----FDHIGVEARKNSAKLLIKFA---NEW 214

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRN 253
              K       +I GDFN + +              +D     P+      +    +   
Sbjct: 215 SHGKGVPPSVVLIGGDFNSEPDDEAYQMMTAPGSGMSDISGLVPERGHYGNHLTYTSFGE 274

Query: 254 K----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  ID+  + +     +         +++        R SDH PI  D 
Sbjct: 275 PNEHPQRIDFLFIQEPRTAQVETFGVLANSFDDQI------RFSDHRPIVSDL 321


>gi|212633735|ref|YP_002310260.1| endonuclease/exonuclease/phosphatase [Shewanella piezotolerans WP3]
 gi|212555219|gb|ACJ27673.1| Endonuclease/exonuclease/phosphatase [Shewanella piezotolerans WP3]
          Length = 361

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 95/346 (27%), Gaps = 67/346 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN---SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +V++ S+N+    E            S ++       L  +      DI+  QE+ S +A
Sbjct: 13  QVKVASFNLFNYIEPPLAYYDFENIYSGEQWAKKQLWLANFLAENQPDIIGFQEVFSADA 72

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD---S 136
           +A    +      ++              D   AIA +     V         AK     
Sbjct: 73  LANQAREAGLE-HFAVVDEPTIVDDFICRDPVVAIASKFAFEDVQAVDVDSDYAKALGLE 131

Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYS----------------- 178
            S   +R+ + + V +       +  +HLKS                             
Sbjct: 132 ESFKYSRKPLRVTVVLPDIGHCDIYVVHLKSKRASLDELPPAQSMTVKHSGKANFGELLG 191

Query: 179 -------PSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTID- 229
                   S      +A  L   +  ++ E+    ++ GDFN  +++   +    + +  
Sbjct: 192 RNVLGQWASGIQRGTEAALLFHTMMLRRIETQNAMILLGDFNDSLSHQPLSLLLAQELRF 251

Query: 230 ---------------------------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
                                        +++         R   +        +DY ++
Sbjct: 252 EREGSGELASYPLSDSYQLYYQREAEVNAENISDENSMPSQRQATHYYGAQGNVLDYILL 311

Query: 263 DQNAYKFLIQESFSEILYNEDDIK------SRGKRLSDHCPISIDY 302
            Q+        +     Y+ +D        +R    +DH P+    
Sbjct: 312 SQDFNPHFHTSTAEVTDYHTEDRHLINPQYARDSHSTDHAPVLCTI 357


>gi|161526271|ref|YP_001581283.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616]
 gi|189349015|ref|YP_001944643.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616]
 gi|221214692|ref|ZP_03587662.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1]
 gi|160343700|gb|ABX16786.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616]
 gi|189333037|dbj|BAG42107.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616]
 gi|221165582|gb|EED98058.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1]
          Length = 256

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +    +AD V +QE+       KV
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEI-------KV 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +   L ++    +      A    ++          ++G   S      R
Sbjct: 40  SADDLPAEFVAPHGLKSYFHHAAKKGYSGAGLYSRREP-----DDVIIGFGSSEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ V+ +++ S    D  +                L        +   
Sbjct: 95  Y-----VEARYGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KKTR 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +  +   +   +  D R    
Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLSKLFDDVGYVDVFRTLDPRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +            S             +  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVASTAKSTSI-----------FKDIKFSDHAPLT 250

Query: 300 IDYDF 304
           +DYD+
Sbjct: 251 VDYDY 255


>gi|47220750|emb|CAG11819.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 451

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 78/299 (26%), Gaps = 46/299 (15%)

Query: 23  KVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            VR+ S N   I  LS+                 Y ++         DIV LQE+ S   
Sbjct: 3   SVRVFSLNCWGIRYLSKH------------VRQRYAMIGDMLSKEKHDIVLLQEVWSEKD 50

Query: 80  ----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 K+   +    ++ +  + +     S + I  A   R                  
Sbjct: 51  YLFLKQKLSSCHPHSHYFKSGVIGSGLALFSKHRIQDAFLYRYSL-------NGYPYMAH 103

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                G +     ++ I      V   HL +            P       QA  L+ ++
Sbjct: 104 HGDWFGGKAVGLAVLNIGSLTANVYVTHLHA-----EYCRDRDPYLPHRVVQAWELQQFV 158

Query: 196 TQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245
                     ++ GD N               G  D + +T   +          ++   
Sbjct: 159 RHTSAGADVVILGGDLNMHPQDLGCRLLRTSTGLRDSYLETSKFDGCENGVTLIPENPFI 218

Query: 246 --NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      I IDY +   ++   +  +       +  +        SDH  ++   
Sbjct: 219 CEKELGPFDKGIRIDYIMFKGSSKASICCDFMCTTKGSVSNQP---FPYSDHEAVTAHL 274


>gi|332228872|ref|XP_003263614.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Nomascus leucogenys]
          Length = 392

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
              ++WNI+ L                +     +  Y      D+VFLQE+         
Sbjct: 144 FSFITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVVFLQEV--------- 183

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +                   TAI ++K  V++  Q      +         R
Sbjct: 184 --IPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMR 236

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S               +    Q + +   + +      
Sbjct: 237 NLLCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESA 285

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 286 TVIFAGDTNLRDQEVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRF 345

Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A +  +I +S   +     +    G+  SDH  +  + D
Sbjct: 346 DRIFFRAAAEEGHIIPQSLDLLGL---EKLDCGRFPSDHWGLLCNLD 389


>gi|171915191|ref|ZP_02930661.1| Endonuclease/exonuclease/phosphatase [Verrucomicrobium spinosum DSM
           4136]
          Length = 331

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 80/256 (31%), Gaps = 43/256 (16%)

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
           R   ++  L    ++   D+V LQE+    A      K+ +   +               
Sbjct: 111 RRNQNHAALETLLRDRQPDVVVLQEVSPGWAEMLPRLKDLYPHQWLEYHRKGSW------ 164

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
                +A+  +       ++  +G          +  +    +  G+ + +L++H     
Sbjct: 165 ----GLAILSR------GAWEKVGLHKLGESGPKKLGMVAEFDFKGQPVSLLNVHAPHPT 214

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
               + +             + ++ W  Q+++     ++AGDFN            +K  
Sbjct: 215 SAAEIAD--------RHVMHEEIRLWSVQRQQEGRAVIVAGDFNCTP-----WAWLYKDF 261

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                L+   + +      +  L ++I ID+  +  +              +     +  
Sbjct: 262 LYQTHLVDTSQGRLFEATRHVWLPDRIMIDHVFVSSD--------------WKVSGREVG 307

Query: 289 GKRLSDHCPISIDYDF 304
               SDH P+ +  D+
Sbjct: 308 PDFGSDHRPVFVSLDW 323


>gi|162147600|ref|YP_001602061.1| exodeoxyribonuclease III protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542233|ref|YP_002274462.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786177|emb|CAP55759.1| putative exodeoxyribonuclease III protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529910|gb|ACI49847.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 270

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 83/307 (27%), Gaps = 67/307 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+V+WNIN+L  +  +                       L  DI+ LQE       
Sbjct: 5   ATHMRIVTWNINSLRLRLPLLARLG----------------AELRPDIICLQE---TKVP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +FP +      +   L     +      +  +A+  +         PL    D  +R+
Sbjct: 46  DDLFPAD------AIRDLGYVHIQHRGMKSYNGVAILSRVPLT-----PLDDTPDWCARS 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  +     + G+ + + + ++ +    D  +   +P  +           W T +  
Sbjct: 95  DCRH-IAASFPMGGRPVELHNFYVPAG--GDIPDPDANPKFAHKLAFVDEATSWFTGRTS 151

Query: 201 SLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                ++ GD N                  ++                +           
Sbjct: 152 HRT--ILVGDLNIAPLEQDVWSHKQLLNVVSHTPPEVTRLMAWQACGFVDAMRHFVPPDE 209

Query: 246 NANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   +            +D+  +  +    L   +                  SDH
Sbjct: 210 KLYTWWSYRNRDWKASNRGRRLDHVWITPDLTAALKDMTV-------LREARDWPTTSDH 262

Query: 296 CPISIDY 302
            P+++D+
Sbjct: 263 VPVAMDF 269


>gi|260061515|ref|YP_003194595.1| exodeoxyribonuclease [Robiginitalea biformata HTCC2501]
 gi|88785647|gb|EAR16816.1| exodeoxyribonuclease [Robiginitalea biformata HTCC2501]
          Length = 269

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 83/305 (27%), Gaps = 73/305 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++ S+N+N +                 +       +      D++ LQE        
Sbjct: 12  NRLKIASYNVNGIRA---------------AIRKGFLDWLVLAGPDVICLQE-------T 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K   +      +       H    +    ++ +A+  +     +  +   G    +  A 
Sbjct: 50  KAMKEQLDLEAFEKAGYPYHYWFSAEKKGYSGVAILSR----QRPDHVAYGTGIGYMDAE 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + ++ ++L S                   Q     + ++   K  
Sbjct: 106 GRN-----IRADFGGVSIMSLYLPSGT--------NIARLDHKLQYMADFQAYVDSLKRE 152

Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247
           +   VI GD+N     +  +D                W     +   I   +  +   + 
Sbjct: 153 IPELVICGDYNICHRPIDIHDPVRNKNVSGFLPVEREWIGNFIDSGFIDSFRHFNPDPHH 212

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           +DY ++ +     L +                  R SDHCPI
Sbjct: 213 YTWWTYRAGARAKNKGWRLDYGMVSRPLEDRLARSVIL-----------PEARHSDHCPI 261

Query: 299 SIDYD 303
            ++  
Sbjct: 262 MLELS 266


>gi|301760096|ref|XP_002915856.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like, partial
           [Ailuropoda melanoleuca]
          Length = 366

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 84/288 (29%), Gaps = 50/288 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
              ++WN++ L                      +  Y    + D++FLQE+         
Sbjct: 118 FSFITWNVDGLDLNN-----------LQERARGVCSYLTLYNPDVIFLQEV--------- 157

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +C +                   TAI ++K  V+   Q                R
Sbjct: 158 --IPPYCSYLKKRASSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNT-----KMMR 210

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   ++G ++ ++  HL+S                    Q + +   + +      
Sbjct: 211 NLLCVYASVSGNELCLMTSHLEST----------RGHAKERMNQFKTVLKKMQE-APESA 259

Query: 204 PFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             + AGD N + +          N  D W+ +       ++  +    CN       K+ 
Sbjct: 260 TVIFAGDTNLRDHEVTKCGGLPSNILDVWEFL-GKPKHCQYTWDTQMNCNLGIAPACKLR 318

Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            D       A    ++ +S   +     +    G+  SDH  +  + D
Sbjct: 319 FDRIFFRTAAESGHIVPQSLELLGL---EKLDCGRFPSDHWGLLCNLD 363


>gi|291222020|ref|XP_002731016.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 338

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/324 (11%), Positives = 78/324 (24%), Gaps = 80/324 (24%)

Query: 4   KYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           K  L  + F +    +  ++  ++LVSWN+N +                        +Y 
Sbjct: 64  KPTLDSLDFSLNAKTTDGKEWNIKLVSWNVNGVRAWCKNEG---------------HKYV 108

Query: 62  KNLDADIVFLQEMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              D DI  +QE       V      + +  ++S      ++                K 
Sbjct: 109 SKEDPDIFTIQETKCQEGEVPDDVKFDGYHSYWSYAEEKGYAGTGLY----------SKV 158

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             +       +   D   R          +    +K + +  ++ +        +     
Sbjct: 159 EPISVTYGIGINKHDKEGR---------CITAEYEKFYFISTYIPNAGKGLKRLSYRQEW 209

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFW 225
                +  + L        +   P +  GD N                         + +
Sbjct: 210 DKDFREYMKKL--------DEKKPIIWCGDLNVAHQEIDLTNPKTNKKTAGFSKEEREGF 261

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFS 276
                   +  +      +                     +DYFV+ +     L      
Sbjct: 262 TKHLEIGLVDSYRHLNPEKTGEWSFWTYMMNARGKNIGWRLDYFVLSKRLLPCLCDSIIR 321

Query: 277 EILYNEDDIKSRGKRLSDHCPISI 300
             +Y            SDH PI +
Sbjct: 322 SQVY-----------GSDHAPIVL 334


>gi|281352756|gb|EFB28340.1| hypothetical protein PANDA_003873 [Ailuropoda melanoleuca]
          Length = 353

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 84/288 (29%), Gaps = 50/288 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
              ++WN++ L                      +  Y    + D++FLQE+         
Sbjct: 105 FSFITWNVDGLDLNN-----------LQERARGVCSYLTLYNPDVIFLQEV--------- 144

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +C +                   TAI ++K  V+   Q                R
Sbjct: 145 --IPPYCSYLKKRASSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNT-----KMMR 197

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   ++G ++ ++  HL+S                    Q + +   + +      
Sbjct: 198 NLLCVYASVSGNELCLMTSHLEST----------RGHAKERMNQFKTVLKKMQE-APESA 246

Query: 204 PFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             + AGD N + +          N  D W+ +       ++  +    CN       K+ 
Sbjct: 247 TVIFAGDTNLRDHEVTKCGGLPSNILDVWEFL-GKPKHCQYTWDTQMNCNLGIAPACKLR 305

Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            D       A    ++ +S   +     +    G+  SDH  +  + D
Sbjct: 306 FDRIFFRTAAESGHIVPQSLELLGL---EKLDCGRFPSDHWGLLCNLD 350


>gi|253569392|ref|ZP_04846802.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251841411|gb|EES69492.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 361

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 85/302 (28%), Gaps = 67/302 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +S+N+   +  E                  +  Y  + +ADI+ LQE  S     
Sbjct: 99  GSIKFLSYNVMGFNNLEKKEGKNP-----------ILSYLADSEADIICLQEYNSTKNKK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  ++      +      H    +     + +A   K   +  +        +   +  
Sbjct: 148 YLTDEDIRKALKAYPYRSIH----NPEKGGSQLACFSKFPILSARPIKYESTYNGSMQY- 202

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYS 178
                   +++N   I +++ HL+S                                  +
Sbjct: 203 -------TLKVNEDTITLINNHLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLA 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ S QA  +   I   K      +  GDFN   +    +    + +D       F 
Sbjct: 256 EASAIRSSQADSVAVAIANSKYPT--IIACGDFNDA-SISYTHRILTQQLDD-----AFT 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  N  +     +    + +           SDH PI
Sbjct: 308 QSGRGLGISYNLNKFYFRIDNILISPN--QKAYNCTVDRSIKD-----------SDHYPI 354

Query: 299 SI 300
             
Sbjct: 355 WC 356


>gi|332665289|ref|YP_004448077.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332334103|gb|AEE51204.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 347

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 80/303 (26%), Gaps = 70/303 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  ++L+++N+    +     L         +    L         D++ +QE      +
Sbjct: 92  APNIKLMTFNVYGFDDFHQRGLP--------AAANELESLVYLHQPDVLCMQEF-----L 138

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +    +    + HS      +    +A+  +   +  +              
Sbjct: 139 YDKQRGPAYLKALTQHNGLTHSVWKPAEE----LAIFSRYPILRSEVRYFGSTNGYR--- 191

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKS---------------------FCFLDSLENTYSP 179
                    +++  + I V ++HL+S                     +  + S+   +  
Sbjct: 192 ------FADLQVGEQIIRVYNVHLRSNSITGLTNKVVDSGDLREKETWSSVGSILRNFKR 245

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +    + Q + L   +     S  P ++ GDFN        +    K     D       
Sbjct: 246 AAQGRASQVEELMAHL---ANSPYPVLVCGDFNDIPQSYTYHRIRKKL----DDAFLSSG 298

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  A +       IDY   DQ               +     +      SDH P+ 
Sbjct: 299 SGIGITYAGRIPGL--RIDYIFTDQR--------------FTPVYCERGKVSFSDHRPVI 342

Query: 300 IDY 302
              
Sbjct: 343 AVI 345


>gi|282880174|ref|ZP_06288894.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281306047|gb|EFA98087.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 267

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 85/299 (28%), Gaps = 74/299 (24%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + V+++++N+ +         +                  K   AD + L E+ + ++
Sbjct: 18  AQETVKVITFNVRSFEPDFDTKPY--------------ADLLKGEQADFICLNEVENRSS 63

Query: 80  VAK------------VFPKNTWCIFYSTERLINHSKRDSNNDIH------TAIAVRKKNV 121
             +                + +  F  +  L N        +           A+  +  
Sbjct: 64  RQQKNGKFRDVVQELALNLHMFGTFGYSYNLSNKQGEYPEANYKYCMNELYGNAILSRYP 123

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180
            +   S  L   K S   A  R  +   V +  GK I ++  HL                
Sbjct: 124 IMNVISKQLPRPKGS---ADQRSVIAADVLLPSGKTIRIISTHLDHIGG----------- 169

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                +QA+ +     +   S +P ++ GD N+ +     N    +    ++        
Sbjct: 170 ---QLEQAKVITS--DEITSSTLPTILTGDMNQGVGSSVINQYLTRYERMDND------- 217

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  N        ID+    +          ++       +     K LSDHCP+ 
Sbjct: 218 -------NGTYMGMSKIDFIFGSKG--------QWNLQSCKVLERFLNQKELSDHCPVL 261


>gi|332881400|ref|ZP_08449050.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332680776|gb|EGJ53723.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 362

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/293 (10%), Positives = 77/293 (26%), Gaps = 53/293 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++L+++N   L+  E  +  +            +  Y    +ADI+ LQE  +   + 
Sbjct: 98  DALKLLTYNTEFLARGEKNAEGRYP----------ILDYLAASEADIICLQEGVAPKNLK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       S      +  R  ++       V  +   +           +      
Sbjct: 148 S-------EYVDSIMAKAGYHIRRLHDGKAEPQFVYSRLPILSVHRIAYESTTNGSLAVE 200

Query: 142 NRRAVELLVEING---------------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                + ++ +N                K+I     +  +      L    + +  L   
Sbjct: 201 LLYGQDTVLLVNNHLESYKLTPEDKMKYKEIIKDPENGHAESNSRELVRKMAGASRLRGP 260

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           Q   + +++   K      ++ GD N        +    +          F +  +    
Sbjct: 261 QVDSVLNYVE--KSGRRAVIVCGDLNDSPISYSCHRLSSRLKSA------FRQSGNGLGL 312

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +         ID+  +            + +      D  +     SDH P+ 
Sbjct: 313 SYNQKGFYFRIDHIFVSD----------YWQTYETHVDKTAPW---SDHYPMI 352


>gi|325962565|ref|YP_004240471.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468652|gb|ADX72337.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3]
          Length = 273

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 78/307 (25%), Gaps = 65/307 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R+ S N+N L                      +  + +  + DI+ LQE+ + +A+ 
Sbjct: 4   DHLRIASVNVNGLRAAFKNG---------------MAAWLEPREVDILCLQEVRAPDAIV 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    + W I +S                   +A+  +   +  +         +  R  
Sbjct: 49  RQLLGDGWHILHSEAEAKG----------RAGVAIASREEPLATRDGIGDDYFATAGRWV 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                         ++ V   ++ S       ++       +++ +   L        + 
Sbjct: 99  EADFRLTDSAGERVQLTVASAYVHSGEVGTPKQDDKFRFLDVMTTRLPEL-------SKH 151

Query: 202 LVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD N                   +       F +            +    + 
Sbjct: 152 SDHALVVGDLNVAHTPLDIRNSKGNVKKAGHLPEERAYFDRFFGEEIGWHDVHRNLAGQV 211

Query: 246 -NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY +         I           D   S   R SDH
Sbjct: 212 DGPYTWWSQRGKAFDNDTGWRIDYHLATPALAASAISA-------VVDRAPSWDTRFSDH 264

Query: 296 CPISIDY 302
            P+ +DY
Sbjct: 265 APLVVDY 271


>gi|228469461|ref|ZP_04054469.1| AP endonuclease domain protein [Porphyromonas uenonis 60-3]
 gi|228309036|gb|EEK17679.1| AP endonuclease domain protein [Porphyromonas uenonis 60-3]
          Length = 392

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 89/297 (29%), Gaps = 60/297 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS N N               K    D      Y    DADI+ LQE    +  +K 
Sbjct: 131 IKVVSLNANAF----------QFTKLGAHDQHATTDYLAKSDADIICLQEAWLSSNKSKY 180

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             + +     S     + +    ++     + V  K   +  +   L    +        
Sbjct: 181 MSERSLRHTLSNYPYYSSAYAVKDHGSR--LIVLSKYPILSTRPIDLHSKFN-------- 230

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------------------NTYSPSCSL 183
                 + +  KK+ + ++HL+SF F    +                      +SP+   
Sbjct: 231 GGAVFTILVGEKKLVLYNLHLESFGFTREEQAHYFQLAQEVNPKGFTQAVGGRFSPAFKR 290

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +QQ + +   I  ++      ++ GDFN       ++      +            + +
Sbjct: 291 RAQQVEQIYQDINYQESP--YLLVCGDFNDTPISYTHHR-----LSAGLHDAIATTGRGT 343

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +        + ID+ +        ++  +             R   +SDH PI  
Sbjct: 344 NYSYYFKSLIGVRIDHMLYS----DQIVARAAHV---------DRSVNISDHKPIIC 387


>gi|220933300|ref|YP_002512199.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994610|gb|ACL71212.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. HL-EbGR7]
          Length = 261

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 63/271 (23%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
            + K  DAD+V +QE     +    + F    +  +Y       +S          A+  
Sbjct: 21  DWLKQQDADVVCIQETKAQEHQLGDETFWPQGYFTYYHDAEKKGYSG--------VALFC 72

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           R +          + G          R      +E    K+ V+ ++L S    +  +  
Sbjct: 73  RSEP------DRIITGLGSEEFDQEGRY-----IEAQFGKLSVISLYLPSGSSSEERQAA 121

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------------YLGNN 221
                 L     + L+            +++ GD+N                   +L   
Sbjct: 122 KFRFMDLFLDHMRALRR-------KRREYIVCGDWNIAHKPIDLKNWKSNQKNSGFLPEE 174

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
             +  T+      +   +  ++  +      N+           +DY V+       +  
Sbjct: 175 RAWLDTLFDELGWVDAFRVVNTEPDQYTWWSNRGQAWAKNVGWRLDYQVVSPGLRDKIRS 234

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            S               +R SDH P+S+DYD
Sbjct: 235 ASI-----------YTEQRFSDHAPLSMDYD 254


>gi|162312263|ref|NP_596144.2| inositol phosphosphingolipid phospholipase C (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|20138888|sp|O74369|NSMA_SCHPO RecName: Full=Putative neutral sphingomyelinase
 gi|157310440|emb|CAB39367.2| inositol phosphosphingolipid phospholipase C (predicted)
           [Schizosaccharomyces pombe]
          Length = 424

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 89/319 (27%), Gaps = 63/319 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A ++R++S+N   L         +   K  T     + +     D DIV LQE+ S    
Sbjct: 6   APELRVLSFNCWGL---------RFVSKYRTERLKAVGEKLAKCDYDIVLLQEVWSIYDF 56

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFS 138
            ++    +  + YS                   +A+  K   +      YPL G   +F 
Sbjct: 57  QEIRNLVSCNLVYSRFFHSAAMGA--------GLAMFSKFPIIESSMNKYPLNGRPQAFW 108

Query: 139 RAGN---RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           R      +      ++   G+ I + + HL +     +              QA ++   
Sbjct: 109 RGDWYVGKGVATASLQHPSGRIISLFNTHLHAPYGKGADTY-----LCHRLSQAWYISKL 163

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK--------------- 239
           +    +     + AGDFN +   + +       +  +  L  +P                
Sbjct: 164 LRAAVQRGHIVIAAGDFNIQPLSVPHEIITSYGLVNDAWLSVYPDQVEHPPNRFSMNDKE 223

Query: 240 -----EKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                        N    N             +DY     +       ++   +    + 
Sbjct: 224 LVEIAGTTCDSRLNTWRENISSKDMDDFVAKRLDYVFHSPS---TCEAKNAKVVFL--ER 278

Query: 285 IKSRGKRLSDHCPISIDYD 303
           +       SDH  I     
Sbjct: 279 VPKLDCSYSDHFAIETVLS 297


>gi|71018093|ref|XP_759277.1| hypothetical protein UM03130.1 [Ustilago maydis 521]
 gi|74702006|sp|Q4P9T3|CCR4_USTMA RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|46099127|gb|EAK84360.1| hypothetical protein UM03130.1 [Ustilago maydis 521]
          Length = 670

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/345 (11%), Positives = 96/345 (27%), Gaps = 64/345 (18%)

Query: 19  SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +  +   ++S+NI     +  +      +           + Q   +  ADI  LQE+G 
Sbjct: 299 ATQESFNVLSYNILFDRYATAQMYGYTPSWALAWDYRKEFILQEVMSYSADICCLQEVGV 358

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSY---- 128
                      +   +       + ++   +++       AI  +    +++++      
Sbjct: 359 EQYEDYFLHHLSQQDYEGVFYPKSRARTMRDDERRRVDGCAIFYKSNKYQLIEKQLVEFN 418

Query: 129 -------PLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTY 177
                      ++D ++R   +  + ++     +++G +I V ++H        +  +  
Sbjct: 419 QIALQRPDFKKSEDMYNRVMTKDNIAVIALLENKLSGSRIVVANVHTHW---DPAFRDVK 475

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV-----------------PFVIAGDFNRKINYLGN 220
               ++L  + +       +                       P +I GDFN      G 
Sbjct: 476 LVQVAMLMDEVEKAGARFAKLPPKPSVAEGYPPPPKYTHANQIPTIICGDFNSVP-ETGV 534

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKIPIDY 259
            D       P D          +                         N     +  IDY
Sbjct: 535 YDFLANGAVPGDHEDFMDHVYGNYTAQGLQHSYKLESSYVPIGELPFTNYTPGYEGAIDY 594

Query: 260 FVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +N      +     +   ++          SDH  I  +++
Sbjct: 595 IFYTKNTLSVTGVLGEIDKQYLSKVVGFPNAHFPSDHICIMSEFN 639


>gi|297561147|ref|YP_003680121.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845595|gb|ADH67615.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 267

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 68/306 (22%), Gaps = 69/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           + + S N+N L                         +    DAD+V LQE    +    A
Sbjct: 1   MTVSSVNVNGLRAAAKKDPGF-------------VGWLAGTDADVVCLQETRAEAEQLPA 47

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V     W +  +       +                       +  P            
Sbjct: 48  GVVAPEGWHVVLAPAAARGRAGVAVY-----------------SRREPDEVRVGFGHAEF 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 + V++ G  + V  ++L S       +                L     + +E 
Sbjct: 91  EDAGRYVEVDLGG--VTVASLYLPSGEVGTERQEEKERFMEAFLPY---LVKRRAEVEER 145

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               V+ GD+N                         +   + +D    +         + 
Sbjct: 146 GRELVVCGDWNIAHAEVDLKNWRANRKNAGFLPEEREWLSRVLDEAGFVDVVRSLHPDQE 205

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           ID  V         +           +       R SDH 
Sbjct: 206 GPYTWWSYRGRAFDNDAGWRIDLQVATPGLAGCAVDA-------RVERASEHAGRWSDHA 258

Query: 297 PISIDY 302
           P+++ Y
Sbjct: 259 PVTVRY 264


>gi|282879782|ref|ZP_06288512.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281306451|gb|EFA98481.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 348

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/324 (9%), Positives = 82/324 (25%), Gaps = 60/324 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDADI------ 68
           +  +N   L +        +              + T+    + +   ++  D+      
Sbjct: 29  VGFYNQENLFDTCHDKGKNDYDFLPTGSYKWDKLKYTNKLRNMARALADMGTDVLPKVGC 88

Query: 69  --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQ 125
             + L E+ +   +  +  +       +      H +      I  A+    +       
Sbjct: 89  AMIGLSEVENARVLDALVAQPP---LAARGYRYIHVEGPDRRGIDCALLYNPQLFTPQTV 145

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           +  P +      S    R  + +   + G+ + V+  H  S                + +
Sbjct: 146 KLVPYVPQLPKDSAFHTRGYLTVTGTLGGEHVAVIVCHWPSRYSGSYYR-------EVAA 198

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLIRFPK 239
            Q + +KD + ++  + +  ++ GD N                +       +     +  
Sbjct: 199 AQVKAVKDSLLRQYPA-IKVMVMGDMNDDPTNRSMAKVLSAKAEVDEVGKDDMYNPWYNI 257

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--------- 290
                             D  V+  N      +  +S + Y +  I              
Sbjct: 258 LAKQGRGTLMYQGGWNLFDQIVLSPNMLNQNGKRDYSSLKYWKCQIVRYDYLIQSTGKYK 317

Query: 291 --------------RLSDHCPISI 300
                           SDH P+ +
Sbjct: 318 GAPKRTTAGGVWLNGYSDHLPVVV 341


>gi|307710716|ref|ZP_07647145.1| exodeoxyribonuclease III [Streptococcus mitis SK321]
 gi|307617487|gb|EFN96658.1| exodeoxyribonuclease III [Streptococcus mitis SK321]
          Length = 275

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDKFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADNVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|270293121|ref|ZP_06199332.1| exodeoxyribonuclease [Streptococcus sp. M143]
 gi|270279100|gb|EFA24946.1| exodeoxyribonuclease [Streptococcus sp. M143]
          Length = 275

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSTRAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILAELFPNYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   + +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDEFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|294657145|ref|XP_459462.2| DEHA2E03124p [Debaryomyces hansenii CBS767]
 gi|199432478|emb|CAG87678.2| DEHA2E03124p [Debaryomyces hansenii]
          Length = 362

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 83/308 (26%), Gaps = 41/308 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+RL + NI   +    V+  K   KR     + +     +  A++V LQE+        
Sbjct: 63  KIRLYTHNIRFDNHHTDVNEEK-WSKRRQLVTSSIDFNTDSGSANVVCLQEVLHNQLEDI 121

Query: 83  VFPK------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           ++        + W  F             +      A      N        P +     
Sbjct: 122 LYNLNEGNTTDDWTYFGVGRTDGKTEGEYAPILFKRAEWNVVDNSTSWLSESPEVP-SRG 180

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  A  R    + +E        L+       F    +     S  L+  + +       
Sbjct: 181 WDAALERIVSMVTLESKANPFVRLNFFNTH--FDHKGKKARRESARLIVDRME------- 231

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKN-LRN 253
               +  P  + GDFN K                + +L          +      N   +
Sbjct: 232 --NYNGYPSFLCGDFNTKPEDEPYQILKSHGFKDSRTLIDQLHSYGHKATFTGFDNLHED 289

Query: 254 KIPIDYF----VMDQNAYKFLIQESFSEILYNEDDIKSR---------------GKRLSD 294
              IDY               I ES     Y+ D  +                 G  +SD
Sbjct: 290 TAIIDYVWGPYFAKNGNQSPSILESEDINYYDLDLHEEYKVMIKQYAVLHSRFHGFYMSD 349

Query: 295 HCPISIDY 302
           H P+S DY
Sbjct: 350 HRPVSADY 357


>gi|70730243|ref|YP_259982.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf-5]
 gi|68344542|gb|AAY92148.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf-5]
          Length = 268

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 81/293 (27%), Gaps = 52/293 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74
                 Q++R+++ N +                        LR+  ++  AD+VFLQE+ 
Sbjct: 9   PNPEAVQRLRVLTVNTHKGFTALNRRF----------ILPELREAVRSTQADLVFLQEVL 58

Query: 75  -GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                  +++        +     S      + +     D H   A+  K      ++  
Sbjct: 59  GEHERHASRLDNWPQQSQYEFLADSMWSDYAYGRNAVYPDGHHGNALLSKFPIRQYRNLD 118

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           +            R  +  ++++ G  ++  + +HL        L+              
Sbjct: 119 VSITG-----PERRGLLHCVLDVPGHAEVHAICVHLSLLESHRQLQLALLGQLL------ 167

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
                   +      P +IAGDFN    +             ND    F +         
Sbjct: 168 --------ESLPEEAPVIIAGDFNDWQMHGN-----ATLGRRNDLHEAFERHHGRPAKTY 214

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                 + +D   +                   +         LSDH P++++
Sbjct: 215 PARWPLLRLDRVYLRNAHSHR-----------PQILGNKPWTHLSDHLPLAVE 256


>gi|110639863|ref|YP_680073.1| exodeoxyribonuclease III [Cytophaga hutchinsonii ATCC 33406]
 gi|110282544|gb|ABG60730.1| exodeoxyribonuclease III [Cytophaga hutchinsonii ATCC 33406]
          Length = 254

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 90/306 (29%), Gaps = 81/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++++++N+N +                 +    L  + K  +AD++  QE+ +       
Sbjct: 1   MKIITYNVNGIRA---------------AITKGLLTWVKATNADVLCFQEIKASVDQFDV 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F    +  +    +   +          + +A+  K + V  +    +   D   R  
Sbjct: 46  ESFKALGYTTYAFPAQKKGY----------SGVAICTKEIPVHVEYGCGIEKYDFEGR-- 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  ++  +     V+++++ S    D  +       +           +I++ ++ 
Sbjct: 94  -------VIRADYPTFSVMNVYMPSGSSGDDRQ-------AFKFGWMDDFLLYISEVRKK 139

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +   ++ GD+N                         +   K  D     +   +  +   
Sbjct: 140 IPNLIVCGDYNICHKAIDIHNPKSNAKTSGFLPEEREWMSKFFDSG--FVDAFRHFNEEP 197

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           IDY  + Q     L +        +           SDHC
Sbjct: 198 HHYTWWSYRAGSRGKNLGWRIDYHSVTQEMVGKLKRSVILPDAIH-----------SDHC 246

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 247 PVLLEI 252


>gi|94987973|ref|YP_596074.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS9429]
 gi|94991856|ref|YP_599955.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS2096]
 gi|94541481|gb|ABF31530.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS9429]
 gi|94545364|gb|ABF35411.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS2096]
          Length = 303

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 91/327 (27%), Gaps = 57/327 (17%)

Query: 3   RKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +  +++    +    +   + +++L+SWNI++L+        +  + R       +    
Sbjct: 7   KSLIVSFFVTITTRLSVRKRYQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              DADI+ +QE              T   ++     +  S  +     +       KN 
Sbjct: 61  VAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                ++P +GA  +    G       ++ +  +  +V  ++  +        +      
Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226
              +     L        ++  P +  GD+N               R   +       + 
Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276
            +        F        +       +            IDY++        + +    
Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMI 286

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
                +           DH PI +D D
Sbjct: 287 SSGERQ-----------DHTPILLDID 302


>gi|84497257|ref|ZP_00996079.1| hypothetical protein JNB_13723 [Janibacter sp. HTCC2649]
 gi|84382145|gb|EAP98027.1| hypothetical protein JNB_13723 [Janibacter sp. HTCC2649]
          Length = 1771

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/352 (13%), Positives = 86/352 (24%), Gaps = 69/352 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGV-----------------------SLWKNSVKRTT 51
                V   V+L ++N+       G                        +   N+  R  
Sbjct: 590 ATPEDVGGDVKLATFNVLNFFPTTGEEFVTSGLGTCTYFNDRDGNHITNNSCTNNGPRGA 649

Query: 52  SD-------YTLLRQYAKNLDADIVFLQEMGS--------YNAVAKVFPKNTWCIFYSTE 96
           ++          +        ADIV L+E+ +          A+ ++           T 
Sbjct: 650 ANDANLTRQRAKIVAAINTAGADIVSLEELENSVQFGKNRDFAIGELVTALNADAGAGTW 709

Query: 97  RLINHSKRDSN----NDIHTAIAVRKKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVE 151
                +         + I T    +   V ++ +S  L   +  +   A  R  +    +
Sbjct: 710 AFAPSASVLPPLAEQDVIRTGFIYKPAQVALVGESVVLADQSTGTEPFADAREPLAQAFK 769

Query: 152 INGKK----IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPF 205
             G        V+  H KS        +    +      QA  L  +    K +      
Sbjct: 770 KVGSPDANAFGVVVNHFKSKGSGTPDPDGQGNANDRRILQANALVTFANDFKTTRGISRM 829

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
            +AGDFN               +                            +D+ + +  
Sbjct: 830 FLAGDFNAYSEEDPI------QVLEAAGYTNLESSSKPGEETYNFDGQIGSLDHVLANAP 883

Query: 266 AYKFLIQESFSEILYNEDDIKSRGK--------------RLSDHCPISIDYD 303
           A   +      +I   E       +              R SDH P  I  +
Sbjct: 884 ALADVNAVDIWDINGYESVYYEYSRFNTNATNLYAPNQFRSSDHSPEIIGIN 935


>gi|323450990|gb|EGB06869.1| hypothetical protein AURANDRAFT_71920 [Aureococcus anophagefferens]
          Length = 556

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/332 (11%), Positives = 83/332 (25%), Gaps = 51/332 (15%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +R+ S+NI     +        +           ++ Q   + +AD++ LQE    +  
Sbjct: 224 SLRVASYNILAEIYATAHAYPYCERWALEWQYRARVVIQELIDTNADVICLQEAQRDHFE 283

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             V P      +       +     +   +    A+  K  +        +   D     
Sbjct: 284 RDVEPAMKSAGYEGLFTQKSREAMGAAGKVD-GCAMFWKTTKYRVAEQRNVSFNDLAYAE 342

Query: 141 GNRR--------AVELLVEINGKKIWVLDIHLKSFCF-------LDSLENTYSPSCSLLS 185
                       A    +  +     V+     +           ++   ++        
Sbjct: 343 AQNANLSERDEHAYLTRLVKDNVAQLVVLEDYPAPGHRSRRLAMANTHLYSHKDFPDTKL 402

Query: 186 QQAQWLKDWITQKKE---SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI------- 235
            Q+  L   +          +P V+AGD N   +         + I+P    +       
Sbjct: 403 WQSLCLLRALESFANRSRETLPLVLAGDLNSGPDSSVYELISTQAINPRHPDLAPRVGQF 462

Query: 236 ---------------------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                                            N  +  +  +DY   DQ   +     +
Sbjct: 463 GAVNVLPDARQISHRLPLGSAYATVAGAEPEFTNYTMGFRGTLDYIWFDQTMLRCAAVAT 522

Query: 275 F--SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               + L    D     +  SDH  +  D+ F
Sbjct: 523 IPTVDALTRAGDALPNPQYPSDHTMLIADFLF 554


>gi|306825594|ref|ZP_07458933.1| RgfB protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304431955|gb|EFM34932.1| RgfB protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 271

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 79/281 (28%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + LL Q   + D D++  QE+       +V   N +    S                
Sbjct: 17  EEKFQLLLQDILDKDYDLICFQEINQEMTSPEVEVNNHYQALPSAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR V  
Sbjct: 77  LAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVVLT 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ GK++ V  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETEVEGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLILA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+L    +   S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDALEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ++               +       G ++SDH  ++    +
Sbjct: 239 KDL---------EVESLHVVFDGQNGPQVSDHYGLNAVLTW 270


>gi|283955329|ref|ZP_06372828.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 414]
 gi|283793089|gb|EFC31859.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 414]
          Length = 252

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 78/304 (25%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L      +                  +      D +  QE+    A    
Sbjct: 1   MKLLSWNVNGLRAICDKNA---------------LDWITKEKIDFIGFQEI---KAHEDK 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FPK  +   +      +  +       ++ +         +++        + F     R
Sbjct: 43  FPKKIYEYPFKHMYFNSAKRA-----GYSGVMSLCNFDSEVKK-------CEFFDDEEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++E   K I + +I+  +    +   N      +        L            
Sbjct: 91  -----VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYADFLVYLDKLLK-------DGF 138

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD N                    L     +   +     +  F +         
Sbjct: 139 EIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF + Q     L      E ++            SDH P+ 
Sbjct: 199 SWWSYRMKARERNVGWRIDYFFISQGLQNRLKNAFIREDIF-----------GSDHAPVG 247

Query: 300 IDYD 303
           I+ D
Sbjct: 248 IEID 251


>gi|229077725|ref|ZP_04210355.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
 gi|228705666|gb|EEL58022.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
          Length = 263

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102
                L +  +  + D++ LQE+        V        F         +         
Sbjct: 18  EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDLSHIGYDVYEEGLAIITKHNIIKEDTFFISKNEDTTYWK-TRKIVSTTIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNAWLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|297820688|ref|XP_002878227.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297324065|gb|EFH54486.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 89/349 (25%), Gaps = 64/349 (18%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                   ++S+NI  +T +  +  +         T     L +      ADIV LQE+ 
Sbjct: 242 PLSMGSFTVLSYNILSDTYASSDIYNYCPTWALAWTYRRQNLLREIVKYRADIVCLQEVQ 301

Query: 76  S---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           +       +    K+ +   +  +         +  D       R +   V +       
Sbjct: 302 NDHFEEFFSPELDKHGYQGLFKRKTNEVFVGNTNTIDGCATFFRRDRFSHVKKYEVEFNK 361

Query: 133 AKDSFSRA-----GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY---------- 177
           A  S + A       + A+  LV+ N   I VL+    S    +  +             
Sbjct: 362 AAQSLTDAIIPVSQKKTALNRLVKDNVALIVVLEAKFGSQAADNPGKRQLLCVANTHVNV 421

Query: 178 -SPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNN------------DD 223
                 +   Q   L   + +    + +P ++ GDFN       +             D 
Sbjct: 422 PHELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTVPASAPHTLLAMGKVDPLHPDL 481

Query: 224 FWKTIDPNDSLIRFPK-----------------------------EKDSRCNANKNLRNK 254
               +       +                                  +     N      
Sbjct: 482 MVDPLGILRPHTKLTHQLPLVSAYSSFARMGGSVIAEQQRRRMDPASNEPLFTNCTRDFI 541

Query: 255 IPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +DY     +      + E   E    +D      +  SDH  +  ++
Sbjct: 542 GTLDYIFYTADTLAVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 590


>gi|288801511|ref|ZP_06406963.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288331592|gb|EFC70078.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 314

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/256 (10%), Positives = 71/256 (27%), Gaps = 31/256 (12%)

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            DIV L E+ + + +  +  +              +    S +     +A+         
Sbjct: 72  PDIVALCEVENDSVMRDLTLRAPLRTL-----RYQYVMTQSPDLRGIDVALLYSPFTFSL 126

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
                +           R  + +   + N   + ++ +H  S    +        S +  
Sbjct: 127 LQCHSVRVNPIKGMRPTRDILYVSGRVFNADTLHIMVVHAPSRMGGE------HFSRAFR 180

Query: 185 SQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
            + A+ + +     + +       I GDFN  +  L         +     +    K  +
Sbjct: 181 CEVAKKINEITDSIRSTSVNPNIAILGDFNDYVGNLSLEMLSNNGLFD---ISANVKGLN 237

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI--------------LYNEDDIKSR 288
                 K       +D+  + +   K+ +    ++                +        
Sbjct: 238 GTKGTYKYKGEWDSLDHIFVSEPLRKYWLDCFINDADFLLCNDEKYGGKQPFRCYIGAKY 297

Query: 289 GKRLSDHCPISIDYDF 304
            +  SDH P+   ++F
Sbjct: 298 HEGYSDHLPLVAHFEF 313


>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 1024

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 80/299 (26%), Gaps = 43/299 (14%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             P      +++ + ++N+  L +     L       T           ++ DADI+ LQ
Sbjct: 126 ASPGALPPPEELTVATFNV--LFDLHEAELLD-----TPRRIPAALSLLRSADADIIALQ 178

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+      A +        ++            +         +  +             
Sbjct: 179 EVTEPFLRALLETPWIREHYFL------SEGPGAATVTPYGQLLLSRFPFASLSQCVFSR 232

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            K           +   + + G  +WV  +HL S             S S  + Q + + 
Sbjct: 233 DKR---------VIAGEIRLKGGTLWVATLHLTSHRAH--------ASSSSRAAQLRAIV 275

Query: 193 DWITQKKESL---VPFVIAGDFNRKINYLGNND-------DFWKTIDPNDSLIRFPKEKD 242
            W              V+AGDFN   +    +        D W  + P +    F  E++
Sbjct: 276 GWANALGTQGLHSPDVVLAGDFNFSEDAPEGHAFAQHGFTDVWPLLRPGEPGYTFDPERN 335

Query: 243 SRCNANKNLRNKIPIDYFVM---DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                      +  +D  ++           +       L   +         SDH  +
Sbjct: 336 GLATVMTVSGRRQRLDRVLVRSPSGRLTPRAVTLFGETPLPAPEAPAGGPLFTSDHFGV 394


>gi|50736245|ref|XP_419093.1| PREDICTED: similar to RP1-30M3.3 [Gallus gallus]
          Length = 369

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 89/288 (30%), Gaps = 48/288 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L++WNI+ L                      +  Y      D+VFLQE+        
Sbjct: 120 SFSLITWNIDGLDLGN-----------LQERARGVCSYLALYSPDVVFLQEV-------- 160

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +                + +   TA+ ++K  V+VL+Q             +  
Sbjct: 161 ---IPPYLCILQRRAGGYTIIPGNVDGYFTAMLLKKPRVKVLKQEIIRFPTT-----SMM 212

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  + + V I+G ++ ++  HL+S                   +Q Q + + + + +   
Sbjct: 213 RNLLVVHVNISGNELCLMTSHLEST----------RDHSKERMKQLQIVLNKMQE-ESQS 261

Query: 203 VPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
              +  GD N + +          N  D W+ +       R+  +  S  N     + K+
Sbjct: 262 TTVIFGGDTNLRDSEVAKLGGLPKNITDIWEFL-GKPQHCRYTWDTSSNTNLRIESKCKL 320

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             D       A    I      +     +    G+  SDH  +   +D
Sbjct: 321 RFDRLYFRPAAEGGHI--IPRNMDLIGLEKLDCGRFPSDHWGLLCRFD 366


>gi|74198544|dbj|BAE39752.1| unnamed protein product [Mus musculus]
          Length = 608

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 33/314 (10%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + P           R+  H    +        +  +             L  + 
Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413

Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189
               A N  A E +++ +   +I VL     S    C  ++    +     +   Q +  
Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVA 473

Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236
                 +++     +P +  GDFN   +               + D      +   S+  
Sbjct: 474 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 533

Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290
               K           N        +DY  +D        +    S              
Sbjct: 534 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLLSHEEVTTHQALPSVS 593

Query: 291 RLSDHCPISIDYDF 304
             SDH  +  D  +
Sbjct: 594 HPSDHIALVCDLKW 607


>gi|134297280|ref|YP_001121015.1| exodeoxyribonuclease III Xth [Burkholderia vietnamiensis G4]
 gi|134140437|gb|ABO56180.1| exodeoxyribonuclease III Xth [Burkholderia vietnamiensis G4]
          Length = 257

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 82/307 (26%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +                +    +AD V +QE  + + +  A
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------DWLGEQNADCVCVQEIKVSADDLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    + +  ++       +S     +       +              +G   S     
Sbjct: 47  EFVEPHGFKSYFHHAAKKGYSGAGVYSRREPDDVI--------------IGFGSSEFDPE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ V+ +++ S    +  +                LK         
Sbjct: 93  GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAELKQ-------- 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N     +   +                +   +      +   +  D R  
Sbjct: 140 QREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTQLFDEVGYVDVFRTLDPRPE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             +  + SDH P
Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSTSI-----------FKDIKFSDHAP 248

Query: 298 ISIDYDF 304
           +++DYD+
Sbjct: 249 LTVDYDY 255


>gi|255729400|ref|XP_002549625.1| hypothetical protein CTRG_03922 [Candida tropicalis MYA-3404]
 gi|240132694|gb|EER32251.1| hypothetical protein CTRG_03922 [Candida tropicalis MYA-3404]
          Length = 430

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 79/301 (26%), Gaps = 36/301 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ S NI      E     +    R       + ++   +   I+ LQE+  Y  +  +
Sbjct: 137 FRIYSHNIKNGGNHELSPGEQEWTARLVPLAASM-RFNTLVQNSIITLQEVYKYQMLDIM 195

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS------F 137
              N                 D        I  + K   ++      L  KD       +
Sbjct: 196 NELNRHEPGKWEYYGRGRIDGD-EVGEFVPILWKAKEWGLVYSDTIWLNEKDPRTSVQGW 254

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A  + ++      ++   +     F          S  L+  + + +  W   
Sbjct: 255 DAVYVRIASFVTLKHKETNTYLNVFNSH---FDHIGVEAQLGSTELILDKMKEINQW--- 308

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLR 252
                 P    GD N + N   +     + +   + +  + +   S              
Sbjct: 309 ------PSFFCGDLNLEPNSKPHKKLTSELVSSVELVTPYNRYGHSWSSVTGFQGQVLKE 362

Query: 253 NKIPIDYFVMDQ-----------NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               IDY    +           +              Y     K  G+ +SDH PI  D
Sbjct: 363 GGQNIDYIFAPKYAQSIDKETECSGNSVFDNIDLRLYQYGMLHSKFNGRYISDHRPIVAD 422

Query: 302 Y 302
           Y
Sbjct: 423 Y 423


>gi|86137122|ref|ZP_01055700.1| hypothetical protein MED193_15647 [Roseobacter sp. MED193]
 gi|85826446|gb|EAQ46643.1| hypothetical protein MED193_15647 [Roseobacter sp. MED193]
          Length = 360

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/354 (11%), Positives = 98/354 (27%), Gaps = 60/354 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           I  Y+  L+  +       A+ +R+ ++N   LS +    L ++  +        +    
Sbjct: 11  ILPYLTLLIPLVALPRLPQAETLRIATFNTE-LSRKGPGLLLRDIERGEDKQIAAVIAVI 69

Query: 62  KNLDADIVFLQEMG---SYNAVAKVF-----PKNTWCIFYSTERL--------------- 98
              + DI+ LQ +    +  A+  +        + +   ++++                 
Sbjct: 70  AEANPDILLLQGIDWDYNNQALKALTQRLAQAGSPYPHLFASQPNAGLATELDLDGDGRL 129

Query: 99  --INHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-------------LLGAKDSFSRAGNR 143
                S+   +      +AV  ++  VL +                L    D       +
Sbjct: 130 GGPGDSQGYGDYTGRAGLAVLSRSPLVLDEMQDLSALLWREIPGATLPQHPDGSPFPSPQ 189

Query: 144 RAVELLVE-----------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                 +             NG+++ +L        F  + +     +   +     +L 
Sbjct: 190 AQAIQRLSSTAHWVLPIMLANGQRLTLLCFQAAPPLFDGAEDRNGLRNADEIRLWQVFLD 249

Query: 193 DWI--TQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             +           FVI G  N   N   G  D   + +         P    +      
Sbjct: 250 GLLPVELAPPPTRRFVIVGGANLDPNQGDGRRDSIAQLLQDRRLQDPLPYSTQANTATVD 309

Query: 250 N-LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ++ +DY +  +    + +  +        +   S     S H  + +D 
Sbjct: 310 WGEGRRMRVDYLLPSKE---WQVAAAGVVWP---ESDSSPAAHASRHRLVWVDL 357


>gi|254166764|ref|ZP_04873618.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
 gi|289596498|ref|YP_003483194.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
 gi|197624374|gb|EDY36935.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
 gi|289534285|gb|ADD08632.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
          Length = 255

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 74/304 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ L+SWN+N +                         + +    DI+ LQE+ +      
Sbjct: 2   ELLLISWNVNGIRACVRNGF---------------LDFLEKYKPDILALQEIKATED-NI 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++                 +   A+  K   +  +        DS  R   
Sbjct: 46  PIEVRYYPDYHKYWNPAK-------KKGYAGTALFTKIEPLNIKFGIGEDKFDSEGR--- 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++    +K ++++ +  +     +  +       L+      L+          
Sbjct: 96  ------VITAEYEKFYLVNAYFPNSQHGLTRLDFKIEFDKLIHSYLNELRK--------K 141

Query: 203 VPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            P ++ GDFN     +                       + +            K+    
Sbjct: 142 KPVILCGDFNVAHKEIDLANPKQNVKNAGFTPQERAWMDEFLQDGYIDTFRMFTKEGGHY 201

Query: 247 ANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                R K         +DYFV+ +     +        +Y            SDH PI+
Sbjct: 202 TWWTYRFKARERNIGWRVDYFVVSEELKDKVKSSWILSEVY-----------GSDHAPIA 250

Query: 300 IDYD 303
           +  D
Sbjct: 251 MVLD 254


>gi|228963475|ref|ZP_04124632.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228796169|gb|EEM43620.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 263

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQFDRLMERVD----SNKLAFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|146421619|ref|XP_001486754.1| hypothetical protein PGUG_00131 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 364

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 77/306 (25%), Gaps = 38/306 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VRL + NI            +   +R     + +        A +V LQE+  +     +
Sbjct: 65  VRLYTHNIR-FDNHNLDKHERYWSERKHLVTSSIDYNTDASFASVVCLQEVLHHQLQDIL 123

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGAKD----SFS 138
           F  N                       +  I  R      V  +++ LL         + 
Sbjct: 124 FNLNNKDTRDEWTYYGVGRSDGYTRGEYAPILYRTSDWDLVDNKTFWLLETPRIPSKGWD 183

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A  R    + +      +  L+     F              +     AQ + + +   
Sbjct: 184 AALERIVTMVTLRSKLNPLVTLNFFNTHF---------DHRGKAARRHLAQLIANKMENY 234

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKNLRN-KI 255
             +  P  + GDFN +             +  + +L                        
Sbjct: 235 --NNYPSFLCGDFNTQPTDEPYQILIKHGMKDSRALIDHLHHYGHTGTFTGFNKHNEANS 292

Query: 256 PIDYFVM------DQNAYKFLIQESFSEILYNEDDIKS------------RGKRLSDHCP 297
            IDY           +       ES +   ++                      +SDH P
Sbjct: 293 VIDYVWAPYFAENGNDQPSMETTESINYYNWDFHKTHKIALRSFAILHSYYDFYMSDHRP 352

Query: 298 ISIDYD 303
           +S DYD
Sbjct: 353 VSADYD 358


>gi|187928145|ref|YP_001898632.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J]
 gi|187725035|gb|ACD26200.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J]
          Length = 287

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 88/302 (29%), Gaps = 47/302 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           +++WNI      +G      S+ R       + ++      D++ LQE+ S  +     P
Sbjct: 5   ILTWNIQWGRGADGHV----SLARQLKQGREMAEF------DVLCLQEVTSGFSDLPGQP 54

Query: 86  KNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                   +      ++        + +  +      A+  +      Q + L    D+ 
Sbjct: 55  GADQWSELAEALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDAT 114

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLSQQAQWLK 192
                R A+E +V+     + ++  HL+ +  L                   + Q   L 
Sbjct: 115 PC-MPRMAIEAVVQAPFGVLRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPATLG 173

Query: 193 DWIT----QKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRC 245
                   +        +I GDFN K + +        F +    +D+            
Sbjct: 174 AEPEAGPFRPLAQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPP 233

Query: 246 NANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 R          D+ ++ +     +++   +              + SDH P+ +
Sbjct: 234 TFGVYDRADWTEPAYACDFMLISEPLKPRVLRLEIN-----------SATQASDHQPMLL 282

Query: 301 DY 302
             
Sbjct: 283 AL 284


>gi|42779563|ref|NP_976810.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 10987]
 gi|42735479|gb|AAS39418.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 10987]
          Length = 263

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 77/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC------------IFYSTERLI 99
                L +  +  + D++ LQE+        V                   ++     + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALYVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNV---------ISDHFGVEVQVD 262


>gi|146307309|ref|YP_001187774.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
 gi|145575510|gb|ABP85042.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
          Length = 262

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 67/256 (26%), Gaps = 43/256 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFY-STERLINHSKRDSN 107
              LR   +   AD+VFLQE+   +A              +     S      + +    
Sbjct: 41  LPELRSAVQATGADLVFLQEVLGSHAMHAKRFQDWPSVPQYEFLADSMWPQFAYGRNAVY 100

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKS 166
                  A+  +   +   +  +  +         R  +   +++ G  ++  + +HL  
Sbjct: 101 PAGDHGNALLSRFPILEYHNLDVTVSG-----TEQRGLLHCRLDVPGHAEVHAICVHLGL 155

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
                              +Q   L   +        P ++AGDFN              
Sbjct: 156 R--------------ERHRRQQLGLLLDLLATLAPAAPVIVAGDFNDWRQRAD------D 195

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            + P+     F         +       + +D   +           S            
Sbjct: 196 QLAPHALTEVFKHHHGKPARSFPARCPLLRLDRIYVRNATALKPQVLS-----------T 244

Query: 287 SRGKRLSDHCPISIDY 302
                LSDH P++ + 
Sbjct: 245 RPWSHLSDHAPLAAEI 260


>gi|120435157|ref|YP_860843.1| hypothetical protein GFO_0800 [Gramella forsetii KT0803]
 gi|117577307|emb|CAL65776.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803]
          Length = 344

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 78/292 (26%), Gaps = 61/292 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L+S+N+   +  E                  +  + K  + DI+ +QE         
Sbjct: 100 DFSLMSYNVRMFNAYEWSDRKDIP--------EKITGFIKENNPDILCVQE--------- 142

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT---AIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                      +      +                A+  K   + Q S            
Sbjct: 143 -------HYIGAAALSEVYPYEYIKLKGKNAEFGSAIFSKYPIINQASLDFP------HD 189

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--------QAQWL 191
             N      LV      + V ++H +S      +++        L          Q +  
Sbjct: 190 GNNNAIFTDLVIDKKDTVRVYNVHFQSLNIKPGIDDLQKEDSKKLLGRIGYGFSLQQEQA 249

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKN 250
           +  +   K+S    +IAGDFN       +    +  I  +D       E  S    + K 
Sbjct: 250 EILLADIKKSPYRTIIAGDFNNT-----SFSYIYDLIKQDDRFNDAFLEAGSGFGKSFKL 304

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + ID+ ++              E     ++ +      SDH P+    
Sbjct: 305 NYFPLRIDFLLI--------------ENNMKINEFRILDIDYSDHYPVLTKI 342


>gi|117619849|ref|YP_857930.1| nuclease [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117561256|gb|ABK38204.1| nuclease [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 714

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 48/381 (12%), Positives = 97/381 (25%), Gaps = 97/381 (25%)

Query: 16  CTASVAQ--KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT----------------- 55
            T + A    +R+ S+N+ N  +    V    N + +  +D                   
Sbjct: 307 STPARADGTDLRVGSFNVLNYFTSHSSVGGALNVLCKDQADADSAKGCNRGAKNLEDFQK 366

Query: 56  ---LLRQYAKNLDADIVFLQEMGSYNA--------------VAKVFPKNTWCIFYSTERL 98
               +      +DAD++ L EM +                   +      +      + L
Sbjct: 367 QRAKIVNAITEMDADLLGLMEMENNGFDSHSAISDLVLALNAQQKEADKQYAFVTLPKAL 426

Query: 99  INHSKRDSNNDIHTAIAVRKKNV-------RVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
           +        + I  A+  R   +        +       L AK    +A  R ++     
Sbjct: 427 LQGEHYFGGDAIMVAMIYRPAKLAPQGDANVITLPVQKYLDAKGVEKQASQRDSLVQTFT 486

Query: 152 ING--KKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDWITQKKESL 202
           + G    + ++  HLKS                            A+ L + +++     
Sbjct: 487 VEGSKDPLTLVVNHLKSKGSGCLENLDGKEPADLQGKCTEFRVSAAKVLGEAVSKLPGQ- 545

Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPN-------------DSL 234
              ++ GDFN                              +                  +
Sbjct: 546 --VLLVGDFNSYAREDAIRVLTDYVPTDGQRKIVSASQTFLGDQVFEQTGSEVAKSYGLV 603

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
               K    +  +         +DY + +      +I  +   I   E ++   G+    
Sbjct: 604 DMNVKFNKEKAISYSYEAELGTLDYALANPALAGKVIAVADWHINSFESNLFEYGRDFTG 663

Query: 292 ----------LSDHCPISIDY 302
                      SDH PI +D 
Sbjct: 664 DMIKSDNPFSASDHDPIIVDL 684


>gi|290789945|pdb|3FZI|A Chain A, 1.9 Angstrom Structure Of The Thermophilic Exonuclease Iii
           Homologue Mth0212
 gi|290789950|pdb|3G0A|A Chain A, Mth0212 With Two Bound Manganese Ions
 gi|290789955|pdb|3G1K|A Chain A, Mth0212 (Wt) Crystallized In A Monoclinic Space Group
 gi|290789956|pdb|3G1K|B Chain B, Mth0212 (Wt) Crystallized In A Monoclinic Space Group
 gi|290789957|pdb|3G2C|A Chain A, Mth0212 In Complex With A Short Ssdna (Cgta)
 gi|290789958|pdb|3G2C|B Chain B, Mth0212 In Complex With A Short Ssdna (Cgta)
 gi|290789969|pdb|3G3C|A Chain A, Mth0212 (Wt) In Complex With A 6bp Dsdna Containing A
           Single One Nucleotide Long 3'-Overhang
 gi|290789970|pdb|3G3C|B Chain B, Mth0212 (Wt) In Complex With A 6bp Dsdna Containing A
           Single One Nucleotide Long 3'-Overhang
 gi|290789976|pdb|3G3Y|A Chain A, Mth0212 In Complex With Ssdna In Space Group P32
 gi|290789977|pdb|3G3Y|B Chain B, Mth0212 In Complex With Ssdna In Space Group P32
 gi|290789979|pdb|3G4T|A Chain A, Mth0212 (Wt) In Complex With A 7bp Dsdna
 gi|290789980|pdb|3G4T|B Chain B, Mth0212 (Wt) In Complex With A 7bp Dsdna
          Length = 265

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 81/302 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++++SWN+N L                        ++      DI+ LQE+ +       
Sbjct: 4   LKIISWNVNGLRAVHRKGF---------------LKWFMEEKPDILCLQEIKAAPEQLPR 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+     +  F++      +          + +A+  K      +    +   D+  R  
Sbjct: 49  KLRHVEGYRSFFTPAERKGY----------SGVAMYTKVPPSSLREGFGVERFDTEGRIQ 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                      +     + +I+  +    +              +      + + ++++S
Sbjct: 99  I---------ADFDDFLLYNIYFPNGKMSEER-------LKYKLEFYDAFLEDVNRERDS 142

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
               +I GDFN     +                       K I+     +   +  +S  
Sbjct: 143 GRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENG--YVDTFRMFNSDP 200

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           +DYF +++     + +                    SDHC
Sbjct: 201 GQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL-----------SDVMGSDHC 249

Query: 297 PI 298
           PI
Sbjct: 250 PI 251


>gi|148272146|ref|YP_001221707.1| putative exonuclease III [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830076|emb|CAN01005.1| putative exonuclease III [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 281

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 85/322 (26%), Gaps = 84/322 (26%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              +R+ S N N +                 +    +  +    D DI+ +QE+ +  + 
Sbjct: 2   PSNLRVASINTNGIRA---------------AFRKGMGDWLATRDVDILAIQEVRAETSD 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +      W + +                    +A+  +    + +        DS  R 
Sbjct: 47  IEGLLGPEWNVLHDAATAKG----------RAGVAIASRRRAEIHRVAIGEEDFDSAGRW 96

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +E   +++G  + V+  ++ S     + ++          +    ++  + +   
Sbjct: 97  -----LEADYDVDGTIVTVVSAYVHSGEVGTAKQDEK-------WRFLDGMERRLPEIAA 144

Query: 201 SLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR 244
                V+ GD N     L   +                   + +      I         
Sbjct: 145 HSELAVVVGDLNVGHRELDIRNWKGNVKRAGFLPRERAYLDRILGARGEEITGVDGSTGP 204

Query: 245 C---------------NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
                                   +           IDY +      + ++        Y
Sbjct: 205 GLGWVDVGRQQAGEVDGPYTWWSWRGKAFDNDTGWRIDYQLATPALAEKVVG-------Y 257

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
             D  ++  +R SDH P+ +DY
Sbjct: 258 AVDRAEAYDQRWSDHTPVVVDY 279


>gi|327265929|ref|XP_003217760.1| PREDICTED: LOW QUALITY PROTEIN: 2',5'-phosphodiesterase 12-like
           [Anolis carolinensis]
          Length = 559

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 84/327 (25%), Gaps = 45/327 (13%)

Query: 18  ASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            +    +R VS+N+         LS                   +LL++     +AD++ 
Sbjct: 237 PAGPASLRAVSYNVLADAYAQSELSRTVLYPYCAPYALEMDYRQSLLQKELLGYNADLLC 296

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+        + P           RL                  R K   + +    L
Sbjct: 297 LQEVDRAAFADGMGPALDAAGLEGLFRLKERQHEGLAT-----FFRRDKLRLLTRHDVAL 351

Query: 131 L-GAKDSFSRAGNRRAVELLVEINGK-----------KIWVLDIHLKSFCFLDSLENTYS 178
                D  + +  R A++    +  K            +  ++   +  C  ++    + 
Sbjct: 352 HRALLDDPAHSPLRHALDACPALRDKVLQRSSVLQVSVLQTINDPSRQICVANTHLYWHP 411

Query: 179 PSCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDD 223
              ++   Q          +T       P +  GDFN   +               + D 
Sbjct: 412 KGGNIRLIQIAIALSHLRHVTHDLYPGTPLLFCGDFNSTPSTGTYGFVINGSIAEDHEDW 471

Query: 224 FWKTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSE 277
                +P+ S+      +           N        +DY  +D        +    S 
Sbjct: 472 RSDGEEPHCSMSLTHPFRLKSACGEPAYTNYVGGFHGCLDYIFIDADALEVEQVIPLPSH 531

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          SDH  +  D  +
Sbjct: 532 EEVTTHQALPSVSHPSDHIALVCDLKW 558


>gi|298504828|gb|ADI83551.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           sulfurreducens KN400]
          Length = 335

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/331 (12%), Positives = 90/331 (27%), Gaps = 57/331 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             V++ SWN+  L          +   +       + +  + L  DI+ L E  +  A  
Sbjct: 2   GTVKITSWNVAHL----ERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGI 57

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV--------------LQQS 127
            +   +     +   +  +     +  D      VR+                   +  +
Sbjct: 58  DLVANDLLDGEWVAVKAAD-GNYATRGDQWIWFLVRQDLADRASLLPVGTWDTFAGVSWT 116

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             L G     +    R    L+++ NG ++  + +HLKS                 + + 
Sbjct: 117 CHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERERFIREA 176

Query: 188 AQW----------LKDWITQKKES--LVPFVIAGDFNRKINYL--GNNDDFWKTIDPNDS 233
                        ++ +I  K          + GDFN             F+  I     
Sbjct: 177 LTARIKMATEAVNVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQG 236

Query: 234 LIRFP---------KEKDSRCNANKNLRNKIP-------IDYF-----VMDQNAYKFLIQ 272
            +               D  C   +      P       +D+      +++ +    +  
Sbjct: 237 NVFATSRFLNHGLFDIPDELCWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVKP 296

Query: 273 ESFSEILYN---EDDIKSRGKRLSDHCPISI 300
            +           +    +  + SDH P+S+
Sbjct: 297 HAGKVEHEVHELVNAGLPKDSQTSDHRPVSL 327


>gi|322411221|gb|EFY02129.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 275

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + RT      +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRT------VLDTLVAQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +   ++     +  S  +     +       KN      ++P +GA  +    G  
Sbjct: 55  KHVESLLSYFPDYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +V  ++  +                  +     L        ++  
Sbjct: 114 -----MITLEFEDFFVTQVYTPNAGDGLRRLEDRQIWDQKYADYLAEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPGSNRRSPGFTDEERQGFTNLLAKGFTDTFRHLHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRLVDKINRSEMISSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            +D D
Sbjct: 270 LLDID 274


>gi|307136223|gb|ADN34060.1| endonuclease/exonuclease/phosphatase family protein [Cucumis melo
           subsp. melo]
          Length = 481

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 83/302 (27%), Gaps = 54/302 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + V+++++N+    E   +           +    L Q  +    D++  QE+ +     
Sbjct: 212 KPVKIMTYNV-WFREDLEL----------RNRMRALGQLIQRHSPDVICFQEV-TPAIYD 259

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                N W ++  +    +HS+            +  K         P   +        
Sbjct: 260 IFQITNWWKVYRCSVIKDSHSRGYF-------CMLLSKLPVKSFSCQPFPNS------IM 306

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R      +E+ NG  + V   HL+S C      N           QA+   D++     
Sbjct: 307 GRELCIGNLEVQNGISLTVATSHLESPCPAPPKWN--QMYSKERVVQAKQAVDFLK---- 360

Query: 201 SLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                +  GD N      G     +       +       +  +  S    + N   +  
Sbjct: 361 ETPNVIFGGDMNWDDKLDGQFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKR 420

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---------------LSDHCPISID 301
           +D F+      +     S   I  +     +  K                 SDH  + + 
Sbjct: 421 LDRFIC---KLQDFKVNSIEMIGTDSIPGLTYTKEKKVGKEMKTLELPVLPSDHYGLLLT 477

Query: 302 YD 303
             
Sbjct: 478 IS 479


>gi|296875948|ref|ZP_06900007.1| RgfB protein [Streptococcus parasanguinis ATCC 15912]
 gi|296433023|gb|EFH18811.1| RgfB protein [Streptococcus parasanguinis ATCC 15912]
          Length = 270

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 77/283 (27%), Gaps = 54/283 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +     +  L++       D++  QE+    A   V     +    S             
Sbjct: 14  ENAQQKFETLKEQILEAQYDVICFQEVNQEMASETVETDEYYQAAPSAVAIHKDHFVHVL 73

Query: 96  ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 + ++  +AV  +    L+    L+   D  +    RR 
Sbjct: 74  VEELAAQGLHYYWTWAYNHIGYDHLNEGVAVLSRQP--LKADEILVSNMDDPTDYHTRRV 131

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                 ++GK+I V  +HL                      +   ++ +  Q ++   PF
Sbjct: 132 AVAHTSVDGKEIVVGSVHLSW-------------WDKGFQFEWPRIEKYFNQVEK---PF 175

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYF 260
           ++AGDFN      G       ++   DS I               +   + +  + IDY 
Sbjct: 176 ILAGDFNNPAGQEGYETILSSSLKLQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYV 235

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                         +     +          +SDH  +  +  
Sbjct: 236 FASPE---------WEIKRLHVIFDGQNKPLVSDHYGLEAELS 269


>gi|91787259|ref|YP_548211.1| endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666]
 gi|91696484|gb|ABE43313.1| Endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666]
          Length = 345

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 80/262 (30%), Gaps = 20/262 (7%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           N+  L   +  +    + ++       + Q    +  D+V +QE+ S  A+ +   +   
Sbjct: 35  NVGYLPLYQKGAFEIFNAEQRKLAALAITQG-NTVLPDVVCIQEVESLIALREFNERFLA 93

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
             +     L +   R  +      + +  K       ++    A   +    +R  +E+ 
Sbjct: 94  AAYPYAVVLDSRDLRQID------VGILSKYPLDSVATHVDDTAAGKY--IFSRDCLEVR 145

Query: 150 VEINGKKIWVLDIH-----LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE---- 200
           + +       L I+     L      ++     + +      QA  +   +  +      
Sbjct: 146 LRVKKTAFVTLFINHFKSKLALGANEEARNRERAAANEKRQLQADTVAKLLKTRFPGAAF 205

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
               F + GD N        +    K+   +   +  P+E+    +  K   +   +D+ 
Sbjct: 206 QSDYFAVLGDLNDTPLAPQLSRLCLKSGLVDALAMLEPEERW--THYWKAKNSVSQLDHV 263

Query: 261 VMDQNAYKFLIQESFSEILYNE 282
           ++       L Q   +      
Sbjct: 264 LLSPALAGKLKQNGITVERRGI 285


>gi|302837660|ref|XP_002950389.1| hypothetical protein VOLCADRAFT_104648 [Volvox carteri f.
           nagariensis]
 gi|300264394|gb|EFJ48590.1| hypothetical protein VOLCADRAFT_104648 [Volvox carteri f.
           nagariensis]
          Length = 1732

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 76/309 (24%), Gaps = 55/309 (17%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
             +    + ++ WNIN L+        ++   R          +  +L  DI   QE+  
Sbjct: 12  AEAHPGVLNIMCWNINCLTPTVRNMELRHKSFRG---------FMDHLQLDIACFQEVKL 62

Query: 77  YNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             A    ++     +  F+++                TA A              L G +
Sbjct: 63  PAARITRELACVEGFQSFWAS-STSKPGYSGVTTWCRTATA-----APRDAAVDCLGGDE 116

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  +      +     +L++++ +     + +              + L+  
Sbjct: 117 RPELDTEGRFVL-----TDHGAFVLLNVYVPN-----AGDRPERARLPYKLAFLRALRTK 166

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDF----------WKTIDP--NDSLIRFPKEKD 242
           + +        V+ GD N        +                +          +     
Sbjct: 167 MDELTALGRQVVLVGDLNIAAERRDVHPTLDFDSMYDKQELAELSGLIAAYPDVWRHLHP 226

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
               +      +         + IDY ++      ++                    + S
Sbjct: 227 DTEGSYTVWDERTSARAFNTGLRIDYVLVSPGLLPYVQSCEILTAAAIPP-------KWS 279

Query: 294 DHCPISIDY 302
           DH  I +  
Sbjct: 280 DHAAILLTL 288


>gi|29348242|ref|NP_811745.1| hypothetical protein BT_2833 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340145|gb|AAO77939.1| endonuclease/exonuclease/phosphatase-like protein [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 361

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 86/302 (28%), Gaps = 67/302 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +S+N+   +  E                  +  Y  + +ADI+ LQE  S     
Sbjct: 99  GSIKFLSYNVMGFNNLEKKEGKNP-----------ILSYLADSEADIICLQEYNSTKNKK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  ++      +      H    +     + +A   K   +  +        +S  +  
Sbjct: 148 YLTDEDIRKALKAYPYRSIH----NPEKGGSQLACFSKFPILSARPIKYESTYNSSMQY- 202

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYS 178
                   +++N   I +++ HL+S                                  +
Sbjct: 203 -------TLKVNEDTITLINNHLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLA 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ S QA  +   I   K      +  GDFN   +    +    + +D       F 
Sbjct: 256 EASAIRSSQADSVAVAIANSKYPT--IIACGDFNDA-SISYTHRILTQQLDD-----AFT 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  N  +     +    + +           SDH PI
Sbjct: 308 QSGRGLGISYNLNKFYFRIDNILISPN--QKAYNCTVDRSIKD-----------SDHYPI 354

Query: 299 SI 300
             
Sbjct: 355 WC 356


>gi|225558763|gb|EEH07047.1| DNA lyase Apn2 [Ajellomyces capsulatus G186AR]
          Length = 636

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 83/344 (24%), Gaps = 84/344 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           VRL +WN+N +        W     R    +  +      L+ADIV  QE  +   +   
Sbjct: 2   VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALEADIVIFQETKIQRKDLQD 53

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVR----------------VL 124
            +   N W  F+S  +    +S             +R +                     
Sbjct: 54  DMVLVNGWDCFFSLPKYKKGYSGVVIYTRNSICCPIRAEEGITGILCLPTSGSNLSSPTS 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-- 182
            +  P       +  A      ++       +   + +   +F  +              
Sbjct: 114 FRDLPEEAQIGGYPTAEQLALSDVDAATLDSEGRCMILEFPAFVLIGVYCPANRDETRDG 173

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGN 220
             +     L   +          ++ GD N   +                          
Sbjct: 174 FRTGFVNVLDARVRNLAAMGKRVIVTGDLNISGSQIDSARALEGVRKGTLTDSEFVSSPV 233

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLR-----------------NKIPID 258
              F + +D    +      +++      C      R                     ID
Sbjct: 234 RRIFNQLVDGGKVIGDRDHGRETPVLVDLCRKYHPDRLGMYTCWEQRVNARPGNYGARID 293

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y + D++   +    +              G   SDHCP+  + 
Sbjct: 294 YVLCDRSMQDWFSASNIQ-----------EGLMGSDHCPVYAEL 326


>gi|218895489|ref|YP_002443900.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9842]
 gi|218543762|gb|ACK96156.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9842]
          Length = 263

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQFDRLMERVD----SNKLAFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|149024967|ref|ZP_01836347.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP23-BS72]
 gi|168494239|ref|ZP_02718382.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC3059-06]
 gi|147929460|gb|EDK80455.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP23-BS72]
 gi|183575787|gb|EDT96315.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC3059-06]
          Length = 275

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 76/305 (24%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA          
Sbjct: 55  KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPS-------- 106

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +++ G+ I +                                 +++ +  +   
Sbjct: 107 -----TMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAK-LDKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|119500018|ref|XP_001266766.1| transcription factor, putative [Neosartorya fischeri NRRL 181]
 gi|148886826|sp|A1CW67|CCR4_NEOFI RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|119414931|gb|EAW24869.1| transcription factor, putative [Neosartorya fischeri NRRL 181]
          Length = 750

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/361 (11%), Positives = 90/361 (24%), Gaps = 72/361 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             +     KV ++S+N    S   Q         V        L+    ++ D+DI+ LQ
Sbjct: 372 SSSNHRTDKVTVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILNELRSHDSDIICLQ 431

Query: 73  EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           E+     +     ++   +   +++   R +   + D+      A   +     +L +  
Sbjct: 432 EIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKASKFILLDKQL 491

Query: 129 PLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKS------- 166
              G             D ++R   +  + ++V       G +  V++ HL         
Sbjct: 492 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGSRFIVVNAHLYWDPAFKDV 551

Query: 167 -----------------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                                   C   +            +   +     +       +
Sbjct: 552 KLIQTAILMEELTKLSETYAKWPPCTDKAAFRFSKEEGQSETPPLEEPAPSMQYASGDQI 611

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRC--- 245
           P ++ GD N        N                  +  +        F  +        
Sbjct: 612 PLLMCGDLNSSPGSAAYNLIAHGRLDEEHPDLEKRLYGNLSKVGMTHPFKLKSAYGAIGE 671

Query: 246 --NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N     K  +DY      + +   +     +               SDH  +  ++
Sbjct: 672 LPFTNYTPDFKDILDYIWYSSNSLHVSALLGEVDKDYLQRVPGFPNYHFPSDHIALLAEF 731

Query: 303 D 303
            
Sbjct: 732 T 732


>gi|260889173|ref|ZP_05900436.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
 gi|260861233|gb|EEX75733.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
          Length = 263

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/301 (9%), Positives = 79/301 (26%), Gaps = 60/301 (19%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++L++ N++  L E                   +L +       D++ +QE+        
Sbjct: 1   MKLLTINVHAWLEEN------------QMEKIDILAKDIAEKQYDVIAMQEVNQLMNNPI 48

Query: 83  VFPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +F       +             +       +     +  +  +A+  ++    +  +  
Sbjct: 49  IFDDIRQENYGWVLLEKLQEYTDTDYYYHWSNSHIGFSKYNEGVAIITRHKIKDEDEF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                S      RR V + ++  G+ I     H+               +          
Sbjct: 108 CTFAQSVRTISARRIVSITIDYKGQDIEFYSCHMNLPNCETEDMGENLRNILNR------ 161

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
                    ++    ++ GDFN   N    +   ++ I        +   +         
Sbjct: 162 --------SKTDNLKILMGDFNTDANGNPED---YQNILNQGLFDTYTLAEKKDSGVTVD 210

Query: 246 ---NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +     +++  IDY   ++                           +SDH  + ++ 
Sbjct: 211 KGIHGWDQDKSQKRIDYIFCNKE---------IKVKESKVIFDGKNKGVVSDHFGVEVEI 261

Query: 303 D 303
           +
Sbjct: 262 E 262


>gi|39995817|ref|NP_951768.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           sulfurreducens PCA]
 gi|39982581|gb|AAR34041.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           sulfurreducens PCA]
          Length = 335

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 88/331 (26%), Gaps = 57/331 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             V++ SWN+  L          +   +       + +  + L  DI+ L E  +  A  
Sbjct: 2   GTVKITSWNVAHL----ERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGI 57

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV--------------LQQS 127
            +   +     +   +  +     +  D      VR+                   +  +
Sbjct: 58  DLVANDLLDGEWVAVKAAD-GNYATRGDQWIWFLVRQDLAARASLLPVGTWDAFAGVSWT 116

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS-- 185
             L G     +    R    L+++ NG ++  + +HLKS                 +   
Sbjct: 117 CHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERERFIREA 176

Query: 186 --------QQAQWLKDWITQKKES--LVPFVIAGDFNRKINYL--GNNDDFWKTIDPNDS 233
                    +A  ++ +I  K          + GDFN             F+  I     
Sbjct: 177 LTARIKMATEAANVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQG 236

Query: 234 LIRFP---------KEKDSRCNANKNLRNKIP-------IDYFVMDQNAYKFLIQESFSE 277
            +               D  C   +      P       +D+ +  Q      +      
Sbjct: 237 NVFATSRFLNHGLFDIPDELCWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVKP 296

Query: 278 ILYNEDD--------IKSRGKRLSDHCPISI 300
                +            +  + SDH P+S+
Sbjct: 297 HAGKVEHEVHELANAGLPKDSQTSDHRPVSL 327


>gi|312864007|ref|ZP_07724243.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           vestibularis F0396]
 gi|311100420|gb|EFQ58627.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           vestibularis F0396]
          Length = 271

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 75/284 (26%), Gaps = 54/284 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +     +  L++       DI+  QE+      A V     +    S             
Sbjct: 14  EDAEGKFQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHALPSATPIHQDHFVRLL 73

Query: 96  ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 + ++  +AV  +      +   L+   D  +    RR 
Sbjct: 74  VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTSSE--ILVSDVDDPTDYHTRRV 131

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                 ++G+++ V  +HL  +      E                      + +    P 
Sbjct: 132 AVAETAVDGREVAVASVHLSWWDKGFQEEWARIEG----------------RFQSIGKPL 175

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260
           ++AGDFN      G        +   DS     +   S       +  K     + IDY 
Sbjct: 176 ILAGDFNNPAGREGYQAILASPLTLQDSFQVAQETNGSYTVGPGIDGWKGNEEPLRIDYV 235

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              Q          ++    +     +    +SDH  +  +  F
Sbjct: 236 FASQE---------WAVNHLSVIFDGNNQPLVSDHYGLEAELTF 270


>gi|212694729|ref|ZP_03302857.1| hypothetical protein BACDOR_04261 [Bacteroides dorei DSM 17855]
 gi|212662708|gb|EEB23282.1| hypothetical protein BACDOR_04261 [Bacteroides dorei DSM 17855]
          Length = 334

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 42/255 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             + +++LV WN       +                       + L   IV LQE    N
Sbjct: 91  PDSNQLKLVCWNAEGFRLNKDT-------------LAKAAHSIRILQPGIVCLQERPHTN 137

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +A       W    +      +   +S  D    +AV  +      Q Y    + +   
Sbjct: 138 LLA-------WDTIQAAFPDYPYCIINSREDEILNLAVFSRWPVGNVQEYYFPDSYNKM- 189

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193
                  ++  + + G+   + ++HL++    +S                 ++QA  L +
Sbjct: 190 -------LQADIRMIGQTFRLFNVHLQTTGMNESSSMKDRLQTMRHHAIRRNRQADLLAN 242

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            I +   S  P ++ GDFN             +++           +      + +   +
Sbjct: 243 AIAE---SPYPVIVCGDFNDIPASYVYRK-ISRSLQDCFLQAGRTWK-----GSYQRWGD 293

Query: 254 KIPIDYFVMDQNAYK 268
            + IDY +       
Sbjct: 294 FLRIDYTLCSPAFQV 308


>gi|115389660|ref|XP_001212335.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|121740235|sp|Q0CT27|CCR4_ASPTN RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|114194731|gb|EAU36431.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 677

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/368 (11%), Positives = 102/368 (27%), Gaps = 78/368 (21%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           + ++  T+S  +KV ++S N    S           +          L+    ++ D+DI
Sbjct: 295 WVILDDTSSSTEKVTVLSHNALCDSSATSSHFGYTPSRALSWEFRRELILSELRSHDSDI 354

Query: 69  VFLQEMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           V LQE+     +     ++   +   +++   R +   + ++ N    A   +     +L
Sbjct: 355 VCLQEVDQGSYNGFFREQLAYNDYKGVYWPRGRAMGMQEEEAKNVDGCATFFKGSKFILL 414

Query: 125 QQSYPLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCF 169
            +     G             D ++R   +  + ++V     + G +  V++ HL    +
Sbjct: 415 DKQMINFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRLTGSRFIVVNAHL---YW 471

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV-------------------------- 203
             + ++      ++L ++   L D   +                                
Sbjct: 472 DPAFKDVKLIQTAILMEEITKLSDGYAKWPPCTDKTAFRFSEAEGGGESENQPEPAPSME 531

Query: 204 -------PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEK 241
                  P  + GDFN        N                  +  +        F  + 
Sbjct: 532 YASGDQIPLFMCGDFNSSPGSAAYNLIANGRLTEEHPDLEKRLYGNLSRVGMTHPFKLKS 591

Query: 242 DSR-----CNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                      N     K  +DY        +   +     +    +          SDH
Sbjct: 592 AYGSIGELSFTNYTPDFKDILDYIWYTSNTLHVSALLGEVDKDYLQKVPGFPNFHFPSDH 651

Query: 296 CPISIDYD 303
             +  ++ 
Sbjct: 652 IALFAEFS 659


>gi|290986733|ref|XP_002676078.1| predicted protein [Naegleria gruberi]
 gi|284089678|gb|EFC43334.1| predicted protein [Naegleria gruberi]
          Length = 340

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 92/318 (28%), Gaps = 66/318 (20%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F     +  + ++ + +SWN+N +S             R   +Y  +    +  +   + 
Sbjct: 62  FLGTNNSYELNKQFKFISWNVNGISAVF----------RKEPNYLKM--LVEKEEPTCLC 109

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE      V K+     +              R   +   TA  V K   +VL   +  
Sbjct: 110 LQETKLSEDV-KLSEMAQYKFKNYIGHFNTSRARKGYSG--TACFVLKHGPKVLNVKF-- 164

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R      + +  +  ++++ +  +     S +N               
Sbjct: 165 -GIGKDKHDLEGR-----TITVEYEDFYLVNTYCPN-----SGQNLDRLEYRTKEWDVDL 213

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------WKTIDPNDSLIRFPKEKDSR 244
           LK +  +K E   P +  GD N  I+ +  +D          T++   S     K     
Sbjct: 214 LKYF--EKLEKKKPIIWGGDLNVAISEMDIHDPLTLSKSPGFTLEERQSSPLVTKASPPF 271

Query: 245 CNA----------NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
            ++                            IDYFV   +    ++     E  +     
Sbjct: 272 IDSFRYKNPYKKQYTYYGYINDMRLQKKGWRIDYFVCSNSLKDKIVNSYILEEYF----- 326

Query: 286 KSRGKRLSDHCPISIDYD 303
                  SDH PI +  +
Sbjct: 327 ------GSDHLPIGLIIN 338


>gi|225431130|ref|XP_002265926.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 625

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/345 (11%), Positives = 99/345 (28%), Gaps = 79/345 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++V++N+N L  +                +  L ++  +LDADI+ +QE  +  +   A
Sbjct: 1   MKIVTYNVNGLRPRIS-------------QFGSLLKFLSSLDADIICVQETKLSRHELTA 47

Query: 82  KVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAK 134
            V   + +  F+S     ++  + +S   +   + +A +  +  + +  +     LL   
Sbjct: 48  DVVMADGYESFFSCTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKS 107

Query: 135 DSFSRAGNRRAVELL----------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             F    +   V+            ++++ +   ++  H     F        S     +
Sbjct: 108 GGFGTGKDEIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERI 167

Query: 185 SQ---QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTI- 228
                  Q L+      ++      + GD N     +                 F   + 
Sbjct: 168 QFKHTFFQILQKRWETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLV 227

Query: 229 ------DPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQN------AYKFLIQ 272
                           + +   C ++            ID+ +   +        +  I 
Sbjct: 228 ECGGPFFDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIF 287

Query: 273 ESFSEILYNEDDIKSRGK---------------RLSDHCPISIDY 302
            +      +      R K                 SDH P+ +  
Sbjct: 288 VTCHVKECDILTQFKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSL 332


>gi|189345695|ref|YP_001942224.1| exodeoxyribonuclease III Xth [Chlorobium limicola DSM 245]
 gi|189339842|gb|ACD89245.1| exodeoxyribonuclease III Xth [Chlorobium limicola DSM 245]
          Length = 258

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/304 (9%), Positives = 73/304 (24%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWNIN                   +    L  +      DI+ LQE+ ++      
Sbjct: 1   MKIASWNING----------------IRARNASLEAWILRNQPDILLLQEVKAHE----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++        +         +    ++   +  ++   +      +   D  +R G  
Sbjct: 40  --EDIPPAISDLDAYRKFWNGSTVRKGYSGTGILLRDSCKVDDVVWEVPDFDIENRTGV- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   ++     ++  ++      +           +     + L+ +I    +S  
Sbjct: 97  --------LHTTHFTLIGTYVPRGESDEHY--------RIKLDYLESLRRYICSLLDSGR 140

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++AGD N                                 +              +  
Sbjct: 141 QVILAGDMNIAHRDIDVHRSQNKPGAVGLRPEERAAIDAQIASGLQDIMRSMHPDAADLF 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID F +       +   S               ++ SDH P+ 
Sbjct: 201 TWWPYWKPARERNLGWRIDCFYLSSELAAKVTVASV-----------DLEEKSSDHAPVI 249

Query: 300 IDYD 303
           ++  
Sbjct: 250 LELS 253


>gi|300118993|ref|ZP_07056704.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus SJ1]
 gi|298723609|gb|EFI64340.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus SJ1]
          Length = 263

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATITYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     K+ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQKGLYDTYELAIKKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262


>gi|302550838|ref|ZP_07303180.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468456|gb|EFL31549.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 253

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 70/294 (23%), Gaps = 57/294 (19%)

Query: 13  LVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           L+P + +       +R++S+NI                     D   L +  K  + D+V
Sbjct: 3   LLPNSRTEPDGSAVIRVLSYNIR----------------SMRDDTAALARVIKACEPDLV 46

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSY 128
            +QE   +    K   +                   +     T  A+       V +   
Sbjct: 47  LVQEAPRFFRWRKKLARLARAADLVIV---------TGGATTTGPAILSSLRAGVERTED 97

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            LL       R   R     +V   G ++ VL  HL             S       +Q 
Sbjct: 98  ILLPPTPGLHR---RGFATAVVRFAGTRLGVLSCHL-------------SLQKDERYEQG 141

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L D +          +  GD N + +                             +  
Sbjct: 142 GMLLDRLAGMGVEHA--IAGGDLNERPDGRTFRRL------AGSLTDCRVAAPWGGEHTW 193

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   ID   +                     D+    +  +DH P+    
Sbjct: 194 TPSDPYQRIDAIFVTGGIEVLGCGVPVGHPGVTGTDL----RAATDHLPVLAAL 243


>gi|148993303|ref|ZP_01822843.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP9-BS68]
 gi|148998707|ref|ZP_01826145.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP11-BS70]
 gi|149006502|ref|ZP_01830201.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP18-BS74]
 gi|168487344|ref|ZP_02711852.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1087-00]
 gi|168489877|ref|ZP_02714076.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP195]
 gi|168491840|ref|ZP_02715983.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC0288-04]
 gi|168574966|ref|ZP_02720929.1| exodeoxyribonuclease III [Streptococcus pneumoniae MLV-016]
 gi|182684788|ref|YP_001836535.1| exodeoxyribonuclease [Streptococcus pneumoniae CGSP14]
 gi|221232582|ref|YP_002511736.1| exodeoxyribonuclease [Streptococcus pneumoniae ATCC 700669]
 gi|225855280|ref|YP_002736792.1| exodeoxyribonuclease III [Streptococcus pneumoniae JJA]
 gi|303254644|ref|ZP_07340746.1| exodeoxyribonuclease [Streptococcus pneumoniae BS455]
 gi|307068457|ref|YP_003877423.1| exonuclease III [Streptococcus pneumoniae AP200]
 gi|307128039|ref|YP_003880070.1| exodeoxyribonuclease III [Streptococcus pneumoniae 670-6B]
 gi|147755401|gb|EDK62450.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP11-BS70]
 gi|147761800|gb|EDK68763.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP18-BS74]
 gi|147928070|gb|EDK79089.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP9-BS68]
 gi|182630122|gb|ACB91070.1| exodeoxyribonuclease [Streptococcus pneumoniae CGSP14]
 gi|183569805|gb|EDT90333.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1087-00]
 gi|183571693|gb|EDT92221.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP195]
 gi|183573869|gb|EDT94397.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC0288-04]
 gi|183578942|gb|EDT99470.1| exodeoxyribonuclease III [Streptococcus pneumoniae MLV-016]
 gi|220675044|emb|CAR69622.1| exodeoxyribonuclease [Streptococcus pneumoniae ATCC 700669]
 gi|225724139|gb|ACO19992.1| exodeoxyribonuclease III [Streptococcus pneumoniae JJA]
 gi|301794808|emb|CBW37264.1| exodeoxyribonuclease [Streptococcus pneumoniae INV104]
 gi|301802537|emb|CBW35298.1| exodeoxyribonuclease [Streptococcus pneumoniae INV200]
 gi|302598356|gb|EFL65400.1| exodeoxyribonuclease [Streptococcus pneumoniae BS455]
 gi|306409994|gb|ADM85421.1| Exonuclease III [Streptococcus pneumoniae AP200]
 gi|306485101|gb|ADM91970.1| exodeoxyribonuclease III [Streptococcus pneumoniae 670-6B]
 gi|332072666|gb|EGI83149.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17570]
 gi|332072995|gb|EGI83476.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17545]
 gi|332199864|gb|EGJ13939.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41317]
 gi|332201253|gb|EGJ15324.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47901]
          Length = 275

 Score = 73.8 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|325960168|ref|YP_004291634.1| exodeoxyribonuclease iii Xth [Methanobacterium sp. AL-21]
 gi|325331600|gb|ADZ10662.1| exodeoxyribonuclease III Xth [Methanobacterium sp. AL-21]
          Length = 257

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 77/305 (25%), Gaps = 77/305 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNA 79
            K+R++SWN+N +                         +  N   DI+ +QE  +     
Sbjct: 2   DKIRILSWNVNGIRAVHKKGF---------------LDWFNNEKPDILCIQETKAVRKQF 46

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +   + + ++ S      +S   +                 L+      G       
Sbjct: 47  PPDIRAVDGYQLYVSEASRKGYSGTATYTS--------------LKPEGVKYGFGVEKFD 92

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      +  +     + +I+  +        +          + A  LKD      
Sbjct: 93  TEGR-----TLITDYGDFVLFNIYFPNGKMSKERLDYKMEFYDTFLEYADELKD------ 141

Query: 200 ESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDS 243
                 V+ GD N                             K +D           ++ 
Sbjct: 142 -QGKNIVVCGDVNTAHREIDLAHPKENSKISGFLPEERAWIDKLLDHGYVDTFREFNQEP 200

Query: 244 RCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                 + R +         +DYF ++++  K +                      SDHC
Sbjct: 201 EEYTWWSYRTRARERNVGWRLDYFFVNRDFMKNVSAA-----------YILPEVMGSDHC 249

Query: 297 PISID 301
           P+ ID
Sbjct: 250 PVGID 254


>gi|301156521|emb|CBW15992.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 263

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 82/297 (27%), Gaps = 54/297 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++L++ N++  L                     +L       D DI+ LQE+    +   
Sbjct: 1   MKLLTLNVHAWLEAN------------QAEKIEILADTIVEKDYDIIALQEVNQLMSAPA 48

Query: 83  VFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           + P      +                 L   +     +     IA   +       ++  
Sbjct: 49  ISPTLKQDNYGVILLNKINQRVAQKYSLFWSNSHIGYDKYDEGIAFLTRLPVYDVDAF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      +R+ + L VE  G+ I     H+         +                
Sbjct: 108 CSQHQRLDSILSRKIIGLTVEYQGQLIECYSCHINLPNCDGENQLDN------------- 154

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
              +I ++ +S    ++ GDFN             K++   D+     ++          
Sbjct: 155 -VRYIVERSQSANLKILMGDFNTDAISDQKAYQQIKSLGLFDTFEMAEQKDSGITVEKAI 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  K    +  +DY  ++Q       Q  F+               +SDH  + +D 
Sbjct: 214 DGWKGHSQEKRLDYIFLNQAKRVLSNQVIFNGKNKPI---------VSDHFGVEVDL 261


>gi|209558893|ref|YP_002285365.1| Putative 3-exo-deoxyribonuclease [Streptococcus pyogenes NZ131]
 gi|209540094|gb|ACI60670.1| Putative 3-exo-deoxyribonuclease [Streptococcus pyogenes NZ131]
          Length = 303

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/327 (11%), Positives = 89/327 (27%), Gaps = 57/327 (17%)

Query: 3   RKYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +  +++    +    +     +++L+SWNI++L+        +  + R       +    
Sbjct: 7   KSLIVSFFVTITTRLSVRKRNQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              DADI+ +QE                  ++     +  S  +     +       KN 
Sbjct: 61  VAQDADIIAIQETKLSAKGPSKKHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                ++P +GA  +    G       ++ +  +  +V  ++  +        +      
Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226
              +     L        ++  P +  GD+N               R   +       + 
Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276
            +        F        +       +            IDY++        + +    
Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRIVDKVKRSEMI 286

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
                +           DH PI +D D
Sbjct: 287 SSGERQ-----------DHTPILLDID 302


>gi|296236749|ref|XP_002763464.1| PREDICTED: deoxyribonuclease-1-like 1-like [Callithrix jacchus]
 gi|167045821|gb|ABZ10489.1| deoxyribonuclease I-like 1 precursor (predicted) [Callithrix
           jacchus]
          Length = 302

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 77/299 (25%), Gaps = 36/299 (12%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILAN---EAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEM-GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           I  LQE+  S  +   +  +       S       S +   +          ++ +    
Sbjct: 52  ISVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           S+ +   KD       R        +  K    + ++ +H         L   Y     +
Sbjct: 112 SFYVYNDKD---DLFAREPFVAQFSLPSKVLPSLVLVPLHTTPKAVEKELNALYHVFLEV 168

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                                 ++ GDFN     L         +           + + 
Sbjct: 169 SQHW-------------QTKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGED 215

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                        I   +  +     L   +  +   +    +     +SDH P+ ++ 
Sbjct: 216 TTVRASTHCTYDRI--VLHGERCQSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVEL 272


>gi|145351707|ref|XP_001420209.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580442|gb|ABO98502.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 349

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 96/355 (27%), Gaps = 76/355 (21%)

Query: 14  VPCTASVAQKVRLVSWNI-------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           +  + S A+ +++  +N                  E +  +  +      T     L + 
Sbjct: 1   MTTSTSGARTIQVCQYNALADALALNDAFASAYYGEDDAEANEEMYDLNWTKRSKDLLRA 60

Query: 61  AKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
             + D     D++ +QE   Y    +   K         E   +  ++         I  
Sbjct: 61  ITSNDSTTAPDVICMQECDHYYDFFEPELKKLGYAGLYKEDQWSPCRKFGAPCDGVCIFY 120

Query: 117 RKKNVRVLQQSYPLLG---------------------AKDSFSRAGNRRAVELLVEINGK 155
           +   + +L    P                         KD  S +G R A+  L+  N K
Sbjct: 121 KTDKLELLSSHAPGTPRARKDDPALNAGKTLMARFRLKKDPRSESGIRNAIGTLIRGNAK 180

Query: 156 K---------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE------ 200
                     I V+  HL+S   +D +            +Q + L   +           
Sbjct: 181 PVFSGEDLQEIVVVTTHLESAKTVDGII--------TRLEQTKELCRHLNAFATSLCADV 232

Query: 201 SLVPFVIAGDFNRKINYL-----------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             V  +IAGD N   N                +D    +   +S      +        K
Sbjct: 233 DKVQIIIAGDLNATPNEACVVHLRGRGMRNAYEDMSAALGDKNSNRFSTWKTR--TGLFK 290

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQES--FSEILYNEDDIKSRGKRLSDHCPISIDY 302
               K  IDY +   +    ++  +    E     D         SDH P+    
Sbjct: 291 TGEVKHTIDYILYSAHRGSKVVSVAKLPDESEIPSDVGLPTFGFPSDHLPLQARI 345


>gi|298386065|ref|ZP_06995622.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
 gi|298261293|gb|EFI04160.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
          Length = 361

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 85/302 (28%), Gaps = 67/302 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +S+N+   +  E                  +  Y  + +ADI+ LQE  S     
Sbjct: 99  GSIKFLSYNVMGFNNLEKKEGKNP-----------ILSYLADSEADIICLQEYNSTKNKK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  ++      +      H    +     + +A   K   +  +        +   +  
Sbjct: 148 YLTDEDIRKALKAYPYRSIH----NPERGGSQLACFSKFPILSARPIKYESTYNGSMQY- 202

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----------------------ENTYS 178
                   +++N   I +++ HL+S                                  +
Sbjct: 203 -------TLKVNEDTITLINNHLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLA 255

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            + ++ S QA  +   I   K      +  GDFN   +    +    + +D       F 
Sbjct: 256 EASAIRSSQADSVAVAIANSKYPT--IITCGDFNDA-SISYTHRILTQQLDD-----AFT 307

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +       +    +    ID  ++  N  +     +    + +           SDH PI
Sbjct: 308 QSGRGLGISYNLNKFYFRIDNILISPN--QKAYNCTVDRSIKD-----------SDHYPI 354

Query: 299 SI 300
             
Sbjct: 355 WC 356


>gi|297735011|emb|CBI17373.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/345 (11%), Positives = 99/345 (28%), Gaps = 79/345 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++V++N+N L  +                +  L ++  +LDADI+ +QE  +  +   A
Sbjct: 1   MKIVTYNVNGLRPRIS-------------QFGSLLKFLSSLDADIICVQETKLSRHELTA 47

Query: 82  KVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAK 134
            V   + +  F+S     ++  + +S   +   + +A +  +  + +  +     LL   
Sbjct: 48  DVVMADGYESFFSCTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKS 107

Query: 135 DSFSRAGNRRAVELL----------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             F    +   V+            ++++ +   ++  H     F        S     +
Sbjct: 108 GGFGTGKDEIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERI 167

Query: 185 SQ---QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTI- 228
                  Q L+      ++      + GD N     +                 F   + 
Sbjct: 168 QFKHTFFQILQKRWETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLV 227

Query: 229 ------DPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQN------AYKFLIQ 272
                           + +   C ++            ID+ +   +        +  I 
Sbjct: 228 ECGGPFFDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIF 287

Query: 273 ESFSEILYNEDDIKSRGK---------------RLSDHCPISIDY 302
            +      +      R K                 SDH P+ +  
Sbjct: 288 VTCHVKECDILTQFKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSL 332


>gi|221112376|ref|XP_002160726.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 511

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/343 (12%), Positives = 90/343 (26%), Gaps = 94/343 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           +++++WNIN                R TS    L     +L+ADI+ LQE      +   
Sbjct: 1   MKILTWNING--------------IRATSRNHSLGNLLDSLEADIICLQETKITRNLLTD 46

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNND---------IHTAIAVRKKNVRVLQQSYPLL 131
            +     +  F+S ++R   +S   +                     K  +V+       
Sbjct: 47  HLANVEGYYAFFSFSKRKTGYSGVATFCKKTLCPIAAEEGLTGLFTSKMEQVVGFYNNPP 106

Query: 132 GAKDSFSR---AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
              D   R   +  R  +   V  +G+++ +++++          +              
Sbjct: 107 EYSDELLRSLDSEGRCMITEHVTSDGQRLCIINVYCP------RADVEEKERFHYKMCFY 160

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------------------- 223
           + L+  I          ++ GD N     + + D                          
Sbjct: 161 RLLQMRIISLMREKRNIIVVGDLNVSHKRIDSCDPCEICIQIFFFKVELLAVDAVVDLTV 220

Query: 224 -------------------FWKTIDPNDSLIRFPKEKDSRCNANKNL----RNKIPIDYF 260
                                  +     +    ++    C   +           ID+ 
Sbjct: 221 DKISEHIQIKGSESFSEKNVNNFLVDTFRIFHPNEQNAYTCWNTQTRARETNFGTRIDFI 280

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + D      L                    + SDHCP+  D++
Sbjct: 281 LADHQLCTVLTNCVIL-----------ADVQGSDHCPVVADFN 312


>gi|213512198|ref|NP_001135227.1| DNA-(apurinic or apyrimidinic site) lyase [Salmo salar]
 gi|197631957|gb|ACH70702.1| APEX nuclease 1 [Salmo salar]
 gi|209154634|gb|ACI33549.1| DNA-apurinic or apyrimidinic site lyase [Salmo salar]
 gi|209154684|gb|ACI33574.1| DNA-apurinic or apyrimidinic site lyase [Salmo salar]
          Length = 312

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 75/304 (24%), Gaps = 73/304 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ SWN++ L                         + ++   D++ LQE       
Sbjct: 54  AANMKITSWNVDGLRAWVKKKG---------------LDWVRDEAPDVLCLQE---TKCA 95

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K  P     +    E    +       + ++ +A+  K   +        G        
Sbjct: 96  EKSLPDEITSM---PEFPHKYWAGSDEKEGYSGVAMLCKTEPLKVT----YGIGKEEHDK 148

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     ++       +++  ++ +        +               L        +
Sbjct: 149 EGR-----VITAEFPTFFLVTAYVPNSGRGLVRLDYRKTWDVEFKAYLSDL--------D 195

Query: 201 SLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
              P V+ GD N     +                   + +  +        F +    + 
Sbjct: 196 KRKPLVLCGDLNVAHEEIDLKNSKGNKKNAGFTAEEREGFNQLLAAGFTDSFRELYPEQA 255

Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           NA                  +DYFV+       L                      SDHC
Sbjct: 256 NAYTFWTYMMNSRSKNVGWRLDYFVLSSALLPGLCDSKIR-----------NQAMGSDHC 304

Query: 297 PISI 300
           PI++
Sbjct: 305 PITL 308


>gi|71902993|ref|YP_279796.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180]
 gi|71802088|gb|AAX71441.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180]
          Length = 303

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 90/327 (27%), Gaps = 57/327 (17%)

Query: 3   RKYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +  +++    +    +     +++L+SWNI++L+        +  + R       +    
Sbjct: 7   KSLIVSFFVTITTRLSVRKRNQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              DADI+ +QE              T   ++     +  S  +     +       KN 
Sbjct: 61  VAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                ++P +GA  +    G       ++ +  +  +V  ++  +        +      
Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226
              +     L        ++  P +  GD+N               R   +       + 
Sbjct: 175 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276
            +        F        +       +            IDY++        + +    
Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRIVDKVKRSEMI 286

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
                +           DH PI +D D
Sbjct: 287 SSGERQ-----------DHTPILLDID 302


>gi|148228766|ref|NP_001090620.1| deoxyribonuclease I-like 1 [Xenopus laevis]
 gi|120538429|gb|AAI29561.1| LOC100036866 protein [Xenopus laevis]
          Length = 297

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 78/295 (26%), Gaps = 33/295 (11%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +VPC  +     ++ ++N+    E                   L+ +  +  +  I  LQ
Sbjct: 1   MVPCVCAT----KICAFNMQHFGE---------KKVAKEHILNLIVKIIQRCE--ISVLQ 45

Query: 73  EMGSYN--AVAKVFPKNTWCIFYSTER--LINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           E+      A++++           T          R S  + +     R   V+  QQ  
Sbjct: 46  EVQDPKGLALSRLLQSLNKAHKKDTFMAVTSPPLGRKSYTEQYV-FIYRSDKVQATQQYK 104

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                 D+      R    +   + GK +  L +            N      +L     
Sbjct: 105 YADDDSDA-PDVFAREPYIVRFSVFGKGLRDLVLVPMHTVPE----NASREIDALYDVFL 159

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  W           +  GDFN   +YL         +  ++       +        
Sbjct: 160 DIMVRW------DAKNILFLGDFNAACSYLSRKKKRTLRLYKDERFHWLIDDSADTTVRG 213

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   I      +     +               + +   +SDH P+ +D +
Sbjct: 214 STNCAYDRI--VAYGEQLMTNVQTAGVYNFTKELGLSEIQALEISDHYPVELDLN 266


>gi|104782141|ref|YP_608639.1| DNase [Pseudomonas entomophila L48]
 gi|95111128|emb|CAK15848.1| putative DNase with DNase I-like domain [Pseudomonas entomophila
           L48]
          Length = 255

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 56/291 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74
           +  +++ +++ N++                        LR+  +   AD+VFLQE+    
Sbjct: 14  TQVRRLTVMTLNVHKGFTPFNRRF----------ILPELREAVRATGADLVFLQEVHGSH 63

Query: 75  GSYNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             + +    +P+     F +        + +           A+  K       +  +  
Sbjct: 64  QRHASRHPGWPEAPQYEFLADSMWPQFAYGRNAVYPHGDHGNALLSKFPIRDHVNLDVSV 123

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             +       R  +   +++      V  I +      D  +       +LL        
Sbjct: 124 HGN-----EERGLLHCELDVPDHG-PVHAICVHLGLREDHRQRQVGLLLALLDN------ 171

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                      P ++AGDFN            W+            +   +   +     
Sbjct: 172 ------LPPDEPVIVAGDFND-----------WRLKADARLSGHLLEAFGTPPRSFPARL 214

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +D   +     +     S           +     LSDH P+  +  
Sbjct: 215 PLLRLDRIYLRNACAEQARVLS-----------RYPWTHLSDHAPLVAEVT 254


>gi|229495328|ref|ZP_04389063.1| AP endonuclease domain protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229317771|gb|EEN83669.1| AP endonuclease domain protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 402

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/331 (12%), Positives = 93/331 (28%), Gaps = 74/331 (22%)

Query: 3   RKYVLALVFFLVP-------------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           R ++   +   +               +      V+++S N    + ++  +   N   R
Sbjct: 108 RGFIFNFLLLALSWWSIRSYIPLHPTPSVIPPHAVKVLSLNCQAFAYEKHTADKPNPTLR 167

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                     Y K+  ADIV LQE       +          +      +       +  
Sbjct: 168 ----------YIKDSHADIVCLQEAAIMRDDSPYVSAKKITEYLPEYPYVVTRYAQGDRG 217

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
             T++ +  K      +  PL    +          +   +++ G+++ V ++HL+SF  
Sbjct: 218 --TSLMLLSKFPVRNTRMLPLESTFN--------GGIAYTLDVAGRELTVFNLHLESFRL 267

Query: 170 LDSLENTYSPSCSL--------------------LSQQAQWLKDWITQKKESLVPFVIAG 209
                  Y+                          ++QA  +   +    E     ++ G
Sbjct: 268 TTEDGTRYARLAREIEAVALKEQMEQKLGPAFLKRAKQADRV--HVEIIHEKTPYILVCG 325

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           DFN       +          +  +  +         +    R    ID+ +  +    +
Sbjct: 326 DFNDTPISYAHQRI------ASGLIDAYASTGCGTGYSFTFKRLGFRIDHILHSRRVKSY 379

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                        +    +   +SDH P+S 
Sbjct: 380 -------------NCKVDKSATISDHKPLSC 397


>gi|332522573|ref|ZP_08398825.1| exodeoxyribonuclease III [Streptococcus porcinus str. Jelinkova
           176]
 gi|332313837|gb|EGJ26822.1| exodeoxyribonuclease III [Streptococcus porcinus str. Jelinkova
           176]
          Length = 275

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 84/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +     + DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVIDRLVSEDADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +   ++     +  S  +     +       K       ++P +GA  +    G  
Sbjct: 55  KHLESILNYFPNYLHVWRSSVEPARKGYAGTMFLYKQTLNPVVTFPEIGAPTTMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  ++    L        ++  
Sbjct: 114 -----IITLEFDDFFVTQVYTPNAGDGLRRLADRQEWDIKYAEYLAQL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNRRSPGFTDEERAGFTALLEKGFTDTFRHLHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +++    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKMNNTGWRIDYWLTSNRVADKVLKSEMLDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 LLEID 274


>gi|294508891|ref|YP_003572950.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8]
 gi|294345220|emb|CBH25998.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8]
          Length = 317

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 77/314 (24%), Gaps = 77/314 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + ++++N+   +   G                   +  + +D D+V LQE+ S   +
Sbjct: 42  PDSLTVMTYNVLYATPDTGT-----------------VRAIEAVDPDVVALQEI-SEPRL 83

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +  +  +   +S E   N           T +  R                       
Sbjct: 84  RHIADELDYYFHHSDEHEANE--------EDTGLLSRYPI------------------SR 117

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS--------PSCSLLSQQAQWLK 192
             R    L + ++   I + ++HL  + +                  +    S + + + 
Sbjct: 118 PTRYGALLYLTVDD-PIRIANVHLSPYPYEPYALRDDEMTPQEAVAQARKTRSPEIKPVL 176

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----------- 241
           D + +  +  VP  + GDFN   +           +     +                  
Sbjct: 177 DALAKSVQEDVPTFLMGDFNEPSHLDWTPAAAEAGLHLGLEVPWPTSRAVTERGFRDAFR 236

Query: 242 ---------DSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                                      ID+  +   +       +      +  D    G
Sbjct: 237 VAHPDEVKRPGYTWTTLTEDPDEVHDRIDFIYVAGASVSVETAYTVGLRDASPTDRSVSG 296

Query: 290 KRLSDHCPISIDYD 303
              SDH  +     
Sbjct: 297 Y-PSDHRSVVTTVS 309


>gi|225010201|ref|ZP_03700673.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-3C]
 gi|225005680|gb|EEG43630.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-3C]
          Length = 254

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 83/303 (27%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                         + +  + D++ LQE  ++     +
Sbjct: 1   MKIISYNVNGIRAALKKGF---------------LDWLQGANPDVLCLQETKAHKDQLDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       H    +    ++ +AV  K          + G    +     R
Sbjct: 46  -------SLFEAAGYPYHYWFSAQKKGYSGVAVLCKTKPEDV----VYGTGIDYMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   V   G  I ++ ++L S                          D+    KE+  
Sbjct: 95  NLL---VRYPG--ISIMSMYLPSGT--------NQDRLDFKFNYMDDFLDYTKSLKETDP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKT----IDPNDSLIRFPKEKDSRCNA----------NK 249
             VI GD+N     +  +D           P +        +    ++            
Sbjct: 142 NLVICGDYNICHQAIDIHDPVRNKNISGFLPEERAWLSALLESGFTDSFRQINTAPDQYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DY ++ +     ++         +           SDHCP+++
Sbjct: 202 WWSYRANSRANNKGWRLDYALVSKPLDTQILNAQILSAAVH-----------SDHCPVTV 250

Query: 301 DYD 303
           +  
Sbjct: 251 EIS 253


>gi|54022898|ref|YP_117140.1| putative exonuclease [Nocardia farcinica IFM 10152]
 gi|54014406|dbj|BAD55776.1| putative exonuclease [Nocardia farcinica IFM 10152]
          Length = 259

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/270 (10%), Positives = 64/270 (23%), Gaps = 56/270 (20%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +  +    +ADIV LQE  + +    V         +        +  +        + +
Sbjct: 21  MLAWLAATEADIVCLQETRATDEQTAVALAPALADGWQ------LAHAEPGAKGRAGVGI 74

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +      +        D   R          +E +  ++ V  +++ S       ++ 
Sbjct: 75  LSRRAPDAVRIGFGSSEFDGSGRY---------LEADFGEVTVASVYVHSGDAGTPRQDE 125

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK---------- 226
                +      +               FV+ GD+N         +              
Sbjct: 126 KYRFMTEFGAYLKA----------RTGDFVVCGDWNIAHTERDLKNWKGNRKSAGFLPEE 175

Query: 227 -----TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
                 +     +                   +           IDY +          Q
Sbjct: 176 RAWIDELLAAGYVDVVRALHPDVDGPYSWWSYRGRAFDNDSGWRIDYHLARGELAGRAKQ 235

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     +   S  +R SDH P+++ Y
Sbjct: 236 A-------VVERAPSYDQRWSDHAPVTVQY 258


>gi|167383741|ref|XP_001736653.1| sphingomyelinase C precursor [Entamoeba dispar SAW760]
 gi|165900834|gb|EDR27066.1| sphingomyelinase C precursor, putative [Entamoeba dispar SAW760]
          Length = 320

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 41/314 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R++++N+         +   +   R            +  D DI+  QE+       
Sbjct: 13  KPIRILTYNMYLRPMLISAAGHDHKDSRLKMFCKE-----RLKDFDIICFQEVFKELNWR 67

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +              R+               + +  +   V    + L           
Sbjct: 68  REKLLKKAKKAGFKYRIQTEKPLFPLFLCDAGLIIISRFPIVE-SQFKLYKRSIYADAVA 126

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKK 199
           ++  +   +E+ + K + V + H ++   LD       PS  +   Q +    ++  + +
Sbjct: 127 SKGVLYAKIELQSNKYLHVFNTHTQADYTLDPE--KAKPSRDVRLNQIRKYAKFVQKKCR 184

Query: 200 ESLVPFVIAGDFNRK-------INYLGNNDDFWK--TIDPNDSLIRF------------- 237
               P +  GDFN                 +F +    D  + +                
Sbjct: 185 NDTFPVICCGDFNVNGRAGTDGTTESPEYTEFLQNFHFDSGELIDLLLRDNHGIQPITFG 244

Query: 238 -----PKEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                    ++ C+          +K  +DY    +   +  I    +  +        +
Sbjct: 245 DSFIDENGTETPCDTEITYEVSCMDKSRLDYMFHWKKPNENPIITCKNCHVDKFQVSGKK 304

Query: 289 GKRLSDHCPISIDY 302
              +SDH  ++ D 
Sbjct: 305 YPFMSDHFGVTCDI 318


>gi|114769839|ref|ZP_01447449.1| exodeoxyribonuclease III, putative [alpha proteobacterium HTCC2255]
 gi|114549544|gb|EAU52426.1| exodeoxyribonuclease III, putative [alpha proteobacterium HTCC2255]
          Length = 262

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 76/309 (24%), Gaps = 77/309 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--V 80
            +++ SWNIN                        + +       D++ LQE  S      
Sbjct: 2   PIKVCSWNIN----------------SVRLREDSVCRLLSEETPDVLCLQECKSPEDKIP 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F K  +                S    +  +A+  +              +      
Sbjct: 46  TEKFSKLGYKYLI-----------ASGQKGYNGVAILSRLPLKEIARRDFASLEH----- 89

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               A  + V ++ K + + + ++ +    D  +   +            + ++   +K 
Sbjct: 90  ----ARHIAVNVDNK-LNIHNFYVPAG--GDIPDRNINEKFGQKLDYLSEMAEYFQSQKP 142

Query: 201 SLVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSR 244
                ++ GD N         D                   + +   + +    K+  S 
Sbjct: 143 QKS--ILVGDLNIAPGEEDVWDHKKLLKIVSHTPQEIQALNEVMLSANWVDIIRKDIPSG 200

Query: 245 CNANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    +            +D+    ++                        ++ SD
Sbjct: 201 L-LYSWWSYRARDWDTANKGRRLDHIWATKDIADKGYGSYI-------SRDVRGWEKPSD 252

Query: 295 HCPISIDYD 303
           H PI   +D
Sbjct: 253 HAPIFSSFD 261


>gi|296225495|ref|XP_002758540.1| PREDICTED: 2',5'-phosphodiesterase 12 [Callithrix jacchus]
          Length = 608

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 294 IRTVSYNILADTYAQTDFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 353

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 354 AVFSDSLVPALDAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFHEALESDPLHKEL 413

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 414 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 473

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 474 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGNIPEDHEDWASNGEEER 528

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++      K           N        +DY  +D        +    S         
Sbjct: 529 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 588

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 589 LPSVSHPSDHIALVCDLKW 607


>gi|164688495|ref|ZP_02212523.1| hypothetical protein CLOBAR_02140 [Clostridium bartlettii DSM
           16795]
 gi|164602908|gb|EDQ96373.1| hypothetical protein CLOBAR_02140 [Clostridium bartlettii DSM
           16795]
          Length = 252

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 82/303 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                         +   +DADI  LQE          
Sbjct: 1   MKFISWNVNGIRACVTKGF---------------LDFFNEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                     +                   
Sbjct: 45  LDLPGYHQYWNYAEKKGYSGTAIFTKQE---------PISVNYG---------------- 79

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKES 201
               + +E + K+  V+ +   +F F+             L  + +W  D+     K  S
Sbjct: 80  ----IQIEEHDKEGRVITLEFDNFYFVTVYTPNSQSELKRLDYRMKWEDDFRKYLLKLNS 135

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N                         + +  +  +  +  +      +  
Sbjct: 136 KKGVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDQEREKFTELLESGFIDTYRHFNPDKEG 195

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYF   ++    L+       +             SDHCP
Sbjct: 196 IYSWWSYRFKAREKNAGWRIDYFCASKDLENNLVSADIHTQIL-----------GSDHCP 244

Query: 298 ISI 300
           I +
Sbjct: 245 IEL 247


>gi|115497626|ref|NP_001069601.1| 2',5'-phosphodiesterase 12 [Bos taurus]
 gi|122132244|sp|Q08DF7|PDE12_BOVIN RecName: Full=2',5'-phosphodiesterase 12; Short=2'-PDE; Short=2-PDE
 gi|115304913|gb|AAI23773.1| Phosphodiesterase 12 [Bos taurus]
 gi|296474836|gb|DAA16951.1| 2',5'-phosphodiesterase 12 [Bos taurus]
          Length = 609

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/325 (12%), Positives = 81/325 (24%), Gaps = 55/325 (16%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 354

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---- 132
                 + P           R+  H    +     +  ++  ++     ++         
Sbjct: 355 CVFTDSLMPALEAFGLEGVFRIKQHEGLATFYR-KSKFSLLSQHDIAFHEALQSDPLHKE 413

Query: 133 -------AKDSFSRAGNRRAVELL-----VEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                     +  R   R +V  +      + + KKI V + HL                
Sbjct: 414 LLEKLALYPSAQERVLQRSSVVQVSVLQSTKDSSKKICVANTHLYWHPKGG--------- 464

Query: 181 CSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFW 225
             +   Q          ++      +P +  GDFN   +               + D   
Sbjct: 465 -YIRLIQMAVALAHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIAEDHEDWTS 523

Query: 226 KTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEIL 279
              +   ++      K           N        +DY  +D        +    S   
Sbjct: 524 NGEEERCNMSLSHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLHALEVEQVIPLPSHEE 583

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
                        SDH  +  D  +
Sbjct: 584 VTTHQALPSVSHPSDHIALVCDLKW 608


>gi|257455440|ref|ZP_05620675.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus
           SK60]
 gi|257447402|gb|EEV22410.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus
           SK60]
          Length = 335

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 91/322 (28%), Gaps = 48/322 (14%)

Query: 22  QKVRLVSWNINTLSEQEGV---SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
            +  + + N+   +    V   +    + K+       L    + L ADI+  QE+    
Sbjct: 3   NQFVIATANLLNFALPNRVFYRNQDVYTPKQYQQKINALAPIFRQLQADIIGCQEIWDEQ 62

Query: 79  AVAKVFPKNTWCIFYSTERLIN-------HSKRDSNNDIHTAIAVRKKNVRVLQQSYP-- 129
           A+  +        ++ T  L +          R +       +  R + +     +    
Sbjct: 63  ALIDLCRAAGLNDYHVTVPLASNQPDSPLTQGRGAVGTPSVGLVSRFEIINTQLLTQMPA 122

Query: 130 ---LLGAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKSFCF---------------- 169
              L        +  NR  +   + +    +  V+  HLKS                   
Sbjct: 123 IALLEVPDVGLYQQFNRPPLIADIRLPNGMLVTVIVAHLKSKRPEFLENAQGEPLEDRND 182

Query: 170 LDSLENTYSPSCSLLSQQAQWLKD-WITQKKESLVPFVIAGDFNRKINYLG--------- 219
                     S  + + +A  ++   I +   +  P ++ GD N  +  +          
Sbjct: 183 PLIRVRAKLRSLCMRAAEAAGIRQVVIEKLSHNNHPLILLGDMNDVMQSVTCQLLSESGE 242

Query: 220 ---NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY---KFLIQE 273
              +       +    ++             + +      +D  ++ +      KF I E
Sbjct: 243 VFYDKSMRDIVLYDASTVQSRMHWLKDVAYTHIHQGMPEVLDQILVSEQFLADSKFNIGE 302

Query: 274 SFSEILYNEDDIKSRGKRLSDH 295
                 +N+       +R +DH
Sbjct: 303 VLQVDYFNDHLKFIVEQRPTDH 324


>gi|325094515|gb|EGC47825.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 636

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 80/344 (23%), Gaps = 84/344 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           VRL +WN+N +        W     R    +  +      L+ADIV  QE  +   +   
Sbjct: 2   VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALEADIVIFQETKIQRKDLQD 53

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVR----------------VL 124
            +   N W  F+S  +    +S             +R +                     
Sbjct: 54  DMVLVNGWDCFFSLPKYKKGYSGVVIYTRNSICCPIRAEEGITGILCLPTSGSNLSSPTS 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-- 182
            +  P       +  A      ++       +   + +   +F  +              
Sbjct: 114 FRDLPEEAQIGGYPTAEQLALSDVDAATLDSEGRCMILEFPAFVLIGVYCPANRDETRDG 173

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGN 220
             +     L   +          ++ GD N   +                          
Sbjct: 174 FRTGFVNVLDARVRNLAAMGKRVIVTGDLNISGSQIDSARALEGIRKGTLTDSEFVSSPV 233

Query: 221 NDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNL---------RNKIPID 258
              F + +D                 +    K    R                     ID
Sbjct: 234 RRIFNQLVDGGKVIGDRDDGRETPVLVDLCRKYHPDRLGMYTCWEQRVNARPGNYGARID 293

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y + D++   +    +              G   SDHCP+  + 
Sbjct: 294 YVLCDRSMQDWFSASNIQ-----------EGLMGSDHCPVYAEL 326


>gi|297671025|ref|XP_002813650.1| PREDICTED: 2',5'-phosphodiesterase 12-like [Pongo abelii]
          Length = 608

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 353

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 413

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 414 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 473

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 474 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 528

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++      K           N        +DY  +D        +    S         
Sbjct: 529 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 588

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 589 LPSVSHPSDHIALVCDLKW 607


>gi|295099755|emb|CBK88844.1| exodeoxyribonuclease III [Eubacterium cylindroides T2-87]
          Length = 249

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 80/303 (26%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                             LDADI  +QE  +     +V
Sbjct: 1   MKLISWNVNGIRAVLNKGF---------------IDILNTLDADIFCIQETKAQPDQIEV 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   + ++ +   +          +   +  K   +       +   D+  R    
Sbjct: 46  DCDLYLYQYINSAQRKGY----------SGTMIFSKIEPLSVHYGIDIPEHDTEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V+ ++  +                  S   Q L            
Sbjct: 92  -----VITLEFDSYYVVTVYTPNSGDGLKRLEYRMEWDKAFSNYIQSL----------DK 136

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P ++ GD N                         D F K +             D    +
Sbjct: 137 PVLLTGDLNVANEEIDIKNPKTNRRNAGFTDEERDSFKKNLLTILKDSYRTLYPDKVEYS 196

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             + R K         IDY+++ +     +        +Y            SDHCP+ +
Sbjct: 197 WWSYRFKAREKNAGWRIDYWLVSEELMPKVKDSKILTDIY-----------GSDHCPVQL 245

Query: 301 DYD 303
           + +
Sbjct: 246 EIE 248


>gi|240275156|gb|EER38671.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
          Length = 636

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 80/344 (23%), Gaps = 84/344 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           VRL +WN+N +        W     R    +  +      L+ADIV  QE  +   +   
Sbjct: 2   VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALEADIVIFQETKIQRKDLQD 53

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVR----------------VL 124
            +   N W  F+S  +    +S             +R +                     
Sbjct: 54  DMVLVNGWDCFFSLPKYKKGYSGVVIYTRNSICCPIRAEEGITGILCLPTSGSNLSSPTS 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-- 182
            +  P       +  A      ++       +   + +   +F  +              
Sbjct: 114 FRDLPEEAQIGGYPTAEQLALSDVDAATLDSEGRCMILEFPAFVLIGVYCPANRDETRDG 173

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGN 220
             +     L   +          ++ GD N   +                          
Sbjct: 174 FRTGFVNVLDARVRNLAAMGKRVIVTGDLNISGSQIDSARALEGVRKGTLTDSEFVSSPV 233

Query: 221 NDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNL---------RNKIPID 258
              F + +D                 +    K    R                     ID
Sbjct: 234 RRIFNQLVDGGKVIGDRDDGRETPVLVDLCRKYHPDRLGMYTCWEQRVNARPGNYGARID 293

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y + D++   +    +              G   SDHCP+  + 
Sbjct: 294 YVLCDRSMQDWFSASNIQ-----------EGLMGSDHCPVYAEL 326


>gi|237727294|ref|ZP_04557775.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434150|gb|EEO44227.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 334

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 42/255 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             + +++LV WN       +                       + L   IV LQE    N
Sbjct: 91  PDSNQLKLVCWNAEGFRLNKDT-------------LAKAIHSIRILQPGIVCLQERPHTN 137

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +A       W    +      +   +S  D    +AV  +      Q Y    + +   
Sbjct: 138 LLA-------WDTIRAAFPDYPYCIVNSREDEILNLAVFSRWPVGNVQEYYFPDSYNKM- 189

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193
                  ++  + + G+   + ++HL++    +S                 ++QA  L +
Sbjct: 190 -------LQADIRMIGQTFRLFNVHLQTTGMNESSSMKDRLQTMRHHAIRRNRQADLLAN 242

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            I +   S  P ++ GDFN             +++           +      + +   +
Sbjct: 243 AIAE---SPYPVIVCGDFNDTPASYVYRK-ISRSLQDCFLQAGRTWK-----GSYQRWGD 293

Query: 254 KIPIDYFVMDQNAYK 268
            + IDY +       
Sbjct: 294 FLRIDYTLCSPAFQV 308


>gi|189027129|ref|NP_808881.3| 2',5'-phosphodiesterase 12 [Homo sapiens]
 gi|172046137|sp|Q6L8Q7|PDE12_HUMAN RecName: Full=2',5'-phosphodiesterase 12; Short=2'-PDE; Short=2-PDE
          Length = 609

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++      K           N        +DY  +D        +    S         
Sbjct: 530 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 589

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 590 LPSVSHPSDHIALVCDLKW 608


>gi|190690435|gb|ACE86992.1| phosphodiesterase 12 protein [synthetic construct]
 gi|190691813|gb|ACE87681.1| phosphodiesterase 12 protein [synthetic construct]
          Length = 609

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++      K           N        +DY  +D        +    S         
Sbjct: 530 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 589

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 590 LPSVSHPSDHIALVCDLKW 608


>gi|126662685|ref|ZP_01733684.1| hypothetical protein FBBAL38_05000 [Flavobacteria bacterium BAL38]
 gi|126626064|gb|EAZ96753.1| hypothetical protein FBBAL38_05000 [Flavobacteria bacterium BAL38]
          Length = 371

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/371 (10%), Positives = 92/371 (24%), Gaps = 78/371 (21%)

Query: 1   MIRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKN---------S 46
           M  K++LA    ++   ++ +Q        +  +N   L +        +         +
Sbjct: 1   MKIKHLLAGFIVILSVNSAFSQDKKFKVHTVAFYNFENLFDTINDPDTYDEEYTPVKGWT 60

Query: 47  VKRTTSDYTLLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
            K        L +    L           I+   E+ +   +  +  +            
Sbjct: 61  SKNYKKKLDNLSRVLVELGTSENQKNSPVIIGACEIENRRVLEDLVKQPR---LIDKGYK 117

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS---------------------- 136
           I H        I      ++K+ +        L   D+                      
Sbjct: 118 IVHFDSPDKRGIDVGFLYQEKHFQPTSYINVPLYIYDNETSADKKDKKSDDETDDKGSVD 177

Query: 137 --FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R   R  + +   ++G++I ++  H  S    +   + +  +   L++  + +   
Sbjct: 178 AKTKRIYTRDQLLVTGLLDGEEINIIVNHWPSRSGGEKKSSPFREAAGRLNR--KIMDSL 235

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS------LIRFPKEKDSRCNAN 248
           I         F+  GD N               ++ ++          F +      ++ 
Sbjct: 236 IK--INPNAKFITMGDLNDGAYNKSVKQGIGAKLNKSELKEPRDVYNPFEQMAKDGHSSL 293

Query: 249 KNLRNKIPIDYFVMDQNAYK---------FLIQESFSEILYNEDDIKSRGKRL------- 292
               +    D  ++ Q                +       +                   
Sbjct: 294 FYRDSGDIFDQIMVSQQFIPADKNDYSTFKYWKAGIYNKPFLIQKTGQYKGYPLRNQNGV 353

Query: 293 ---SDHCPISI 300
              SDH P+ I
Sbjct: 354 PGFSDHFPVYI 364


>gi|109037975|ref|XP_001099328.1| PREDICTED: 2',5'-phosphodiesterase 12 isoform 2 [Macaca mulatta]
          Length = 609

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++      K           N        +DY  +D        +    S         
Sbjct: 530 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 589

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 590 LPSVSHPSDHIALVCDLKW 608


>gi|47826687|dbj|BAD20938.1| 2'-phosphodiesterase [Homo sapiens]
 gi|119585746|gb|EAW65342.1| 2'-phosphodiesterase, isoform CRA_a [Homo sapiens]
 gi|194390702|dbj|BAG62110.1| unnamed protein product [Homo sapiens]
          Length = 609

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++      K           N        +DY  +D        +    S         
Sbjct: 530 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 589

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 590 LPSVSHPSDHIALVCDLKW 608


>gi|47567194|ref|ZP_00237908.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9241]
 gi|47556037|gb|EAL14374.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9241]
          Length = 263

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 77/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVNRLMEHVD----SNEISFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++      +D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQKGLHDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNI---------ISDHFGVEVQVD 262


>gi|50422749|ref|XP_459951.1| DEHA2E14872p [Debaryomyces hansenii CBS767]
 gi|49655619|emb|CAG88197.1| DEHA2E14872p [Debaryomyces hansenii]
          Length = 301

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 79/277 (28%), Gaps = 18/277 (6%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           N+  +      +  +   +R       L+         +V LQE+     +  +   N  
Sbjct: 35  NVR-VDTDNRFASEQPWSERKGGVIQALQSR-NENGPTLVGLQELKHNQLLDILQGLNGN 92

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----LGAKDSFSRAGNRRA 145
                           +    ++A+    +   +L  +                A   R 
Sbjct: 93  GNNIPWTHFGVGRDDGAEKGEYSAVLYNTEEWSLLNGTSRWLSETPDTPSIAWGAATIRI 152

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           V +    + +   V++     F            S     + A  +  WI Q   +  P 
Sbjct: 153 VTMTTMQHKQSGKVVNYFNTHF---------DHKSEEARQKSADLIAGWIQQM-PNNYPT 202

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
            ++GDFN   + +          D N +  +      S     +   N+  ID+      
Sbjct: 203 FLSGDFNSISSDVAYQTLQKSLKDSNTAAYQHINGNLSTYTGFEKNDNQSIIDFIW--SP 260

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   +   + Y   D    G R SDH P+++ +
Sbjct: 261 LNTNQENSNTYALEYEVLDNMYNGSRFSDHRPVNVHF 297


>gi|290789984|pdb|3G91|A Chain A, 1.2 Angstrom Structure Of The Exonuclease Iii Homologue
           Mth0212
          Length = 265

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 81/302 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++++SWN+N L                        ++      DI+ LQE+ +       
Sbjct: 4   LKIISWNVNGLRAVHRKGF---------------LKWFMEEKPDILCLQEIKAAPEQLPR 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+     +  F++      +          + +A+  K      +    +   D+  R  
Sbjct: 49  KLRHVEGYRSFFTPAERKGY----------SGVAMYTKVPPSSLREGFGVERFDTEGRIQ 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                      +     + +I+  +    +              +      + + ++++S
Sbjct: 99  I---------ADFDDFLLYNIYFPNGAMSEER-------LKYKLEFYDAFLEDVNRERDS 142

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
               +I GDFN     +                       K I+     +   +  +S  
Sbjct: 143 GRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENG--YVDTFRMFNSDP 200

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           +DYF +++     + +                    SDHC
Sbjct: 201 GQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL-----------SDVMGSDHC 249

Query: 297 PI 298
           PI
Sbjct: 250 PI 251


>gi|229056209|ref|ZP_04195634.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
 gi|228721126|gb|EEL72659.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
          Length = 263

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102
                L +  +  D D++ LQE+        V        F         +         
Sbjct: 18  EKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNII 77

Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  N K I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWK-TRKIVSATIAYNDKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q+      +  
Sbjct: 183 EGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLILSNQSKTVNSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNV---------ISDHFGVEVQLD 262


>gi|190691695|gb|ACE87622.1| phosphodiesterase 12 protein [synthetic construct]
          Length = 575

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 261 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 320

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 321 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 380

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 381 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 440

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 441 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 495

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++      K           N        +DY  +D        +    S         
Sbjct: 496 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 555

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 556 LPSVSHPSDHIALVCDLKW 574


>gi|146282503|ref|YP_001172656.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           stutzeri A1501]
 gi|145570708|gb|ABP79814.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           stutzeri A1501]
 gi|327480758|gb|AEA84068.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           stutzeri DSM 4166]
          Length = 267

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 91/292 (31%), Gaps = 52/292 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+    +R+++ N +                        LR+  +++ AD+VFLQE+   
Sbjct: 19  ATAVNSIRILTVNTHKGFTALNRRF----------ILPELREAVRSVSADVVFLQEVLGT 68

Query: 78  NAVAKV----FPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +    +    +PK     F +        + +     D     A+  K   +  ++  + 
Sbjct: 69  HEKHAMRFHNWPKTPQYEFLADSIWTDFAYGRNAVYPDGDHGNALLSKFPIIRYENLDIS 128

Query: 132 GAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            A         R  +  ++++ G ++   + +HL                 S  +QQ + 
Sbjct: 129 IAG-----PERRGLLHSVLQVPGHEEFHAICVHLGLR-------------ESHRAQQLEL 170

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L + +        P V+AGDFN       +  D    +     +      + ++    + 
Sbjct: 171 LCNLLDS-LPQGAPVVVAGDFNDWRLRATHTLDRCAGLHE---VFAVAHGQVAKTFPARW 226

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +D   +                             LSDH P++++ 
Sbjct: 227 PML--RLDRIYVRNATSHK-----------PRILGNKPWTHLSDHLPLAVEI 265


>gi|89074584|ref|ZP_01161056.1| hypothetical protein SKA34_11975 [Photobacterium sp. SKA34]
 gi|89049688|gb|EAR55247.1| hypothetical protein SKA34_11975 [Photobacterium sp. SKA34]
          Length = 379

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/378 (11%), Positives = 96/378 (25%), Gaps = 92/378 (24%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +P      Q +R+  +N+   SE E   +++ +   T   +  L    +N++AD++ L 
Sbjct: 4   FLPTVLETKQSLRVAMFNVAM-SEPEQGRIFQLTSSLTNKRFQRLAAIIQNVNADVLLLC 62

Query: 73  EMGSYNA-----------VAKVFPKNTWCIFYSTERLINHSK------------------ 103
           E                 +  +                  S                   
Sbjct: 63  EFDHPGNGGDDGSLDNFCLNYLSHSQYQQPVIDYPYRYCPSSNTGLLTEIDLNDDGVCSL 122

Query: 104 -----RDSNNDIHTAIAVRKKNV-----RVLQQSYPLLGAKDSFS-------------RA 140
                       H    V  K           Q +      ++               R 
Sbjct: 123 PEDAQGYGEFHGHFGFVVLSKYPLQQENIRTWQHFLWKDMPNNLMPVDYYSKYAQDILRL 182

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK- 199
            ++  V + + +  K+I +L  H     F  +       +      + Q L D I     
Sbjct: 183 SSKNHVVIPIVVKDKEINLLCCHPTPPVFDGNE----RRNAKRNHDEIQLLIDIINDAPY 238

Query: 200 -----------ESLVPFVIAGDFNRKINYLGNNDDFWKTI-----------------DPN 231
                      +    F++ GD N  I+         K +                    
Sbjct: 239 LVDDNDQVGGLKPDDAFIVMGDLNADIDDGDGYKAAIKQLLKHDKINKTVSRGKYTPKSE 298

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK------FLIQESFSEILYNEDDI 285
                + ++K +           + +DY +  +N         +  +      L  +   
Sbjct: 299 GGRHYYSRQKRTGRKNEWTHLAGLRLDYVLPSENLEVIKTGVFWPDKSDALRELILDCKG 358

Query: 286 KSRGKRLSDHCPISIDYD 303
           + +    SDH  + +D +
Sbjct: 359 REKPVAGSDHRMVWVDIN 376


>gi|223647596|gb|ACN10556.1| Deoxyribonuclease gamma precursor [Salmo salar]
          Length = 298

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/289 (11%), Positives = 78/289 (26%), Gaps = 35/289 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NI +  E                   ++         DI+ + E+   +   K 
Sbjct: 29  LKICTFNIQSFGE---------KKIEKQEVVDVILALIARC--DIMLVMEIKDLSG--KA 75

Query: 84  FPKNTWCIFYSTERLINHSKRDSNN-------DIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           FP+    +        N      ++           A   R++ V V ++ Y     +  
Sbjct: 76  FPQLMTQLNSDYSSRKNEYNYVISDRLGRKSYKEQYAFIYRQRLVSV-KEVYQYPDTQLG 134

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              A +R    +        +    I                 S   +++     +D   
Sbjct: 135 DEDAFSREPFIVWFSSPKTVVQDFVIIPIHTTPDT--------SVREINELYDVFQDVKQ 186

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +        +I GDFN    Y+         +  + S +    +                
Sbjct: 187 RWTSKN--VIIMGDFNADCGYVPKKQWSSIRLRSDTSFLWLTGDTIDTTVKESTDCAYDR 244

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDYD 303
           +   +      + +   S     + +    +      +SDH P+ I  +
Sbjct: 245 V--VLHGDKMIQAVKPTSLDVFDFRQAYGLTELQALAVSDHYPVCITVN 291


>gi|319794897|ref|YP_004156537.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS]
 gi|315597360|gb|ADU38426.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS]
          Length = 346

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 96/325 (29%), Gaps = 52/325 (16%)

Query: 23  KVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            + + + N+  L+        +    + +        + +    L+AD++ +QE+    A
Sbjct: 10  TLFVATCNLLNLANPNRVYYENQDAYNEREYERKIDWIGERFHALNADVLAVQEVWDEAA 69

Query: 80  VAKVFPKNTWCIFYSTER-----------LINHSKRDSNNDIHTAIAVRKKNVRVLQ-QS 127
           +     ++     + +                  +  +       IA R +   V     
Sbjct: 70  LKAAIARSGLRYDFVSVPGAENTPPPGSPPGTPPRAGAQGTPRVGIATRLQVDNVQSFVD 129

Query: 128 YPLLGAKD----SFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFL------------ 170
           +P     D           R  +   + + +G+++ VL +HLKS                
Sbjct: 130 FPPAFGVDVPGLGPHTRFERPPLLATLRMKHGQQVHVLTVHLKSKRPKFLQDAQGNHLED 189

Query: 171 ----DSLENTYSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKINY-------L 218
                        S  +   +A  L+   I   + +  P V+ GDFN   +         
Sbjct: 190 RDDRKVGVMASLRSLLMRGAEAAALRCIVIDLLQGTNTPLVVMGDFNDNPHSVTTQLVAA 249

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQNAYKFLI-- 271
            +   + K          +  + +S        ++ +      +D  ++ +         
Sbjct: 250 TSEVAYDKAARDVALFNAYEMQGESALKKDVAYSHIHQGFPDVLDQILVSEEFIASSRHS 309

Query: 272 -QESFSEILYNEDDIKSRGKRLSDH 295
             +      +N+   + R +  SDH
Sbjct: 310 LGDVRRVDYFNDHLHEGRDRSRSDH 334


>gi|291515225|emb|CBK64435.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 292

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/282 (10%), Positives = 67/282 (23%), Gaps = 39/282 (13%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +S+NI             +      +      +  +    D++  QE             
Sbjct: 38  MSFNIRYY------KPGADGDNGWVARRAACLEMIRAESPDVIGFQEPHRPQIDYLKVNL 91

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-----DSFSRAG 141
             +             ++  +   H  I  R+    +L   +  +          +    
Sbjct: 92  PEYAEVDMGRDAATDIEKKPDGGEHLMIMYRRSKYILLDSGFFWISPTPECPSRGWDAMC 151

Query: 142 NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R  V + ++    GK+ +  D H                     ++ A+ +   + +  
Sbjct: 152 RRVTVWVQLKDRKTGKEFFYFDTHFDHIGK------------QARAESARMMVARMKRIA 199

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PID 258
                  ++GD N   +     +     +       R             +   +   ID
Sbjct: 200 GEKAAVFLSGDLNTTYD-----NALLDPLKAWMQSARHAAPVTDELPTFNDFGKRSLWID 254

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +                       D  +     LSDH P+  
Sbjct: 255 FIFARNARALAY--------RTLVDSGRYGVPFLSDHNPVYA 288


>gi|257466188|ref|ZP_05630499.1| Endonuclease/exonuclease/phosphatase [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 265

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 90/297 (30%), Gaps = 54/297 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++L++ N++  L             ++      LL +       D++ LQE+        
Sbjct: 1   MKLLTINVHSWL------------EEKQEEKMELLAKVIAEKRYDVIALQEVNQKIEARL 48

Query: 83  VFPKNTWCIFYS------------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +  +     F                           +     IA+  ++  + ++ +  
Sbjct: 49  LKGEIREDNFLYQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYC 108

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             +K  +S + +R+ V++ +EI GK+I     H+     ++        +          
Sbjct: 109 TNSKTVYSIS-SRKIVKIFLEIEGKEIEFYSCHMNLPDCIEENMEQNIQN---------- 157

Query: 191 LKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
               I +        ++ GDFN     +         + +  + +L +   +  +     
Sbjct: 158 ----ILKHSSRNCLKILMGDFNTDAFHDESSYQKILEQGLFDSYTLSKKKDDGVTVYKNI 213

Query: 249 KNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N +    +DY  + +          F+   Y           +SDH  + +  
Sbjct: 214 SGWENSVEEKRLDYIFLTEQYEVESSYVIFNGKNYPC---------ISDHNGLEVIL 261


>gi|302545710|ref|ZP_07298052.1| putative secreted protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302463328|gb|EFL26421.1| putative secreted protein [Streptomyces himastatinicus ATCC 53653]
          Length = 446

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 78/293 (26%), Gaps = 40/293 (13%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +     +++N+  L E       + +    +               DIV +QE  +Y+A 
Sbjct: 39  SGSFNALTYNVAGLPEGLSSGHPEKNTPLISPRLGA---------YDIVNVQEDFNYHAA 89

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +       R          + ++T             +         +    
Sbjct: 90  -------LYAGDDHPYRTPTSGGAAFGDGLNT----LSDLPYDDFERVKWTKCNGTDCLT 138

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +  +    G  + + ++H  +               +        L D+I     
Sbjct: 139 PKGFTLARVRLAEGAYLDLYNVHTNAGTTD--------ADLAARRANITQLSDFI-TANS 189

Query: 201 SLVPFVIAGDFNRKINYLG--NNDDFWKTIDPNDSLIRFPKEKDSR-------CNANKNL 251
           +    ++ GD N +         D   +    +  +                 C+ +   
Sbjct: 190 AGNAVLVMGDTNTRYTRAADNIRDLATRNGLTDAWVNLVRGGSAPPAGSDALVCDPDNVT 249

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +D  +        L    ++      D + + GK LSDH P ++D+ +
Sbjct: 250 NTCEVVDKVLYRSGPLLSLTAARYNNEN--TDFLDAEGKPLSDHYPHTVDFSW 300


>gi|90022590|ref|YP_528417.1| metal-dependent hydrolase-like protein [Saccharophagus degradans
           2-40]
 gi|89952190|gb|ABD82205.1| Endonuclease/exonuclease/phosphatase [Saccharophagus degradans
           2-40]
          Length = 261

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 74/301 (24%), Gaps = 59/301 (19%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +   ++A +     C A+      ++S+NI T    +   L              +    
Sbjct: 18  MGTLIVASLLAASSCMAN-----TVMSFNIRTEHANDPGELA------WEKRKNNVVDVI 66

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              +  ++ LQE  +         +           L   +           +  +    
Sbjct: 67  VKANPSVIGLQEASTNQ-------QQYIEEALGPNWLPVANAPILFRSDMYRLLAKGAIE 119

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            V  +                R A  + ++        L I         S   +     
Sbjct: 120 LVEDK-------------WEKRFAYWVKLKAKNTNTSWLFITTHWGVDEASQLGSAE--- 163

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                    L   I   +   +P V+ GDFN + N         K ++ +     F    
Sbjct: 164 ----ILLNALPAVIKNWQ---LPVVLVGDFNAEPNSEPY----LKMVNGSPLQNNFWGLT 212

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +   +         IDY                +      D   +     SDH PI  +
Sbjct: 213 FTGFKSKAI----AQIDYAW----------AAGLTINKCKADRFDAYATPASDHYPIICE 258

Query: 302 Y 302
           +
Sbjct: 259 F 259


>gi|124506311|ref|XP_001351753.1| CCR4 [Plasmodium falciparum 3D7]
 gi|23504682|emb|CAD51560.1| CCR4 [Plasmodium falciparum 3D7]
          Length = 2488

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/370 (11%), Positives = 89/370 (24%), Gaps = 87/370 (23%)

Query: 22   QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             +  +++WN+        E        +   +   T + Q   N   DIV LQE+ + + 
Sbjct: 2116 NQFTIMTWNVLAEIYGTIEAFPHCDPYMLAWSYRKTKIIQEILNNSPDIVCLQEIQNEHF 2175

Query: 80   VAKVFPKNTWCIFYSTERLI-------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
            +    P      +    +            KR          A+     ++       L 
Sbjct: 2176 LDFFKPSLGEFGYEGVYKQKTKEIFTSPSGKRRGGKYTIDGCAIFYNKKKLKFVETYALE 2235

Query: 133  AKDSFSRA---------GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----- 178
                   A             ++   +  +   + +L   ++ +  +             
Sbjct: 2236 FSKLIKEASVLTLPKEIQKNPSLVKRLLKDNVALVILLECIQQYSKIYDKSEEKQNKKLL 2295

Query: 179  -----------PSCSLLSQQAQWLKDWIT-------QKKESLVPFVIAGDFNRKINYL-- 218
                        +  +   Q Q L   I        +K E++   +I GDFN   +    
Sbjct: 2296 IVANTHIVANPEANYVKIWQTQILVKVIEYLKINFIKKYETIPSLIICGDFNSTPSSAVY 2355

Query: 219  -------------GNNDDFWKTIDPNDSLIRFPKEKDS---------------------- 243
                           N D +  +           +                         
Sbjct: 2356 QLIYKKTCSRTHEDFNSDKYSLLTDLKLGHNLNLKSAYAISKLLSQKLNPEEYNNLELYE 2415

Query: 244  RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---------RLSD 294
                N        +DY   +      +   + ++      + +             R SD
Sbjct: 2416 PLFTNYTSNFIGCLDYIFYNDENLNIISTVNVADENQLIQEAQMYQLSDCALPSPIRPSD 2475

Query: 295  HCPISIDYDF 304
            H P+   ++F
Sbjct: 2476 HLPLIAQFEF 2485


>gi|323495481|ref|ZP_08100555.1| nuclease [Vibrio sinaloensis DSM 21326]
 gi|323319362|gb|EGA72299.1| nuclease [Vibrio sinaloensis DSM 21326]
          Length = 1007

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/395 (10%), Positives = 97/395 (24%), Gaps = 117/395 (29%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT--------------------LLRQYA 61
            +R+ S+N+ N  +    +    N+     +D                       +    
Sbjct: 474 DLRVASFNVLNYFTSHSSIGGPLNASCDDQADADASRGCNRGAKELDEFLVQKAKIVNAM 533

Query: 62  KNLDADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSN 107
             +DADI+ L E+ +      +A+  +           ++ +      +    +     +
Sbjct: 534 VKMDADIIGLMEVENNGFAEGSAIQDLVDALNAKISDTEDHYSFVEIEDGDKYNDDFFGS 593

Query: 108 NDIHTAIAVRKKNVR-------------------VLQQSYPLLGAKDSFSRAGNRRAVEL 148
           + I  AI  R  +V                    + +         +       R ++  
Sbjct: 594 DAIMVAILYRADSVTPKEAATVIITPEQHIAADTITRDDGKGGQEGNPAYDKYQRHSLLQ 653

Query: 149 LVEIN--GKKIWVLDIHLKS-----------FCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              +   G+ + ++  H KS                   +      +     A  + + +
Sbjct: 654 TFTVKETGEDLSIVVNHFKSKGSECIEEWIAGVEDTEPTDLQGNCNNFRVSAAHAVGEAL 713

Query: 196 TQKKESLVPFVIAGDFNR-------------KINYLGNNDDFWKTI-------------- 228
              K      ++ GD N                +   N  D+ + I              
Sbjct: 714 KDVKGD---VLVMGDLNAYGMEDPLLTLTDYDASDAENGKDYGREIYTAAYTNVAGGEVS 770

Query: 229 -------DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                                +   +         +D+ +   +  + ++      I   
Sbjct: 771 AERTKIEKGFGYTNLNTLLHGADTFSYTYSGELGNLDHALASSSLAQKVVAIEDWHINSL 830

Query: 282 EDDIKSRGKR-------------LSDHCPISIDYD 303
           E ++     +              SDH P+ I  D
Sbjct: 831 ESNLFEYSSKYTGNMPKYTDVYSASDHDPVLIAID 865


>gi|307709700|ref|ZP_07646152.1| exodeoxyribonuclease III [Streptococcus mitis SK564]
 gi|307619598|gb|EFN98722.1| exodeoxyribonuclease III [Streptococcus mitis SK564]
          Length = 275

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHLEILAELFPNYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDKFFVTQVYTPNAGDGLKRLEERQIWDVKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIE 274


>gi|332216271|ref|XP_003257271.1| PREDICTED: 2',5'-phosphodiesterase 12 [Nomascus leucogenys]
          Length = 609

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/319 (10%), Positives = 75/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++                  N        +DY  +D        +    S         
Sbjct: 530 CNMSLTHFFNLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 589

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 590 LPSVSHPSDHIALVCDLKW 608


>gi|299752303|ref|XP_002911744.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Coprinopsis cinerea okayama7#130]
 gi|298409772|gb|EFI28250.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Coprinopsis cinerea okayama7#130]
          Length = 684

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/352 (12%), Positives = 99/352 (28%), Gaps = 71/352 (20%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---S 76
           + V ++S+NI     + +       +     +     + +       DI+ LQE+     
Sbjct: 309 ETVSVLSYNILCEKYATERLYGYTPSWALAWSYRKHQIMKEITEHGTDIICLQEVDIAQY 368

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--IHTAIAVRKKNVRVLQQSYPLLG-- 132
            +  ++   ++ +   Y  +        +S+       AI  +    +++++ +      
Sbjct: 369 EDFFSRDLEEHGYAGAYHPKSRSRTIHNESDRRLVDGCAIFYKSSRFQLVEKQHIEFSAL 428

Query: 133 ---------AKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCF-LDSLENTYS 178
                      D F+R   +  + +L     ++ G +I + ++H+       D      +
Sbjct: 429 AMQRQDFKKTDDMFNRVLGKDHIAVLCLLEDKVTGTRILIANVHVHWDPAYSDVKLVQVA 488

Query: 179 PSCSLLSQQAQWLKDWITQKKES------------------------LVPFVIAGDFNRK 214
                + + A  L  +  +  +S                         VP +IAGDFN  
Sbjct: 489 LLVDEVEKSANQLAKYPPRPPKSATPGAGDSEPGKPERNPPHYTDGTKVPLIIAGDFNST 548

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-----------------------ANKNL 251
            +          ++ PN +     K      +                        N   
Sbjct: 549 PDSSVYEFLSTGSLPPNHADFLSHKYGRYTSDGMKHRLNLRSAYASPSLAAEQHLTNYTP 608

Query: 252 RNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +  +DY      N     I          +          SDH  I  + 
Sbjct: 609 SFQGELDYIWYSASNLAVNQILSPMDHRYLEKVVGFPNVHFPSDHISIGCEL 660


>gi|238881455|gb|EEQ45093.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 359

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 74/309 (23%), Gaps = 45/309 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
            +RL + NI   ++       +    R       ++      + +I+ LQE+        
Sbjct: 63  TLRLYTNNIRFDNKNYPDKYEQPWEIRKFQSINSMQFNTFQGNGNIICLQEVLHNQLIDI 122

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD---- 135
           +  +     W  +         S   +           +    +   ++ L         
Sbjct: 123 LQGLNDIQEWNYYGVGRTDGEKSGEFAPILYKD-----QDFKIIENSTFWLSPTPHVPSK 177

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            +  A  R    +  +         +I    +            S  L+  + +      
Sbjct: 178 GWDAALERIVTMVTFQSRLNPEIKFNIFNTHY--DHRGVEARRKSSQLIVDKMK------ 229

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKNLRN 253
                +  P  + GDFN + N    +            LI        ++          
Sbjct: 230 ---NYNDYPSFLCGDFNTEPNDEPYHILTKAGFKDGKILIDKKSAYGFETTFTGFDINNE 286

Query: 254 K-IPIDYFVMDQNAYKFLIQE------------------SFSEILYNEDDIKSRGKRLSD 294
               IDY     +  + L                       +   +        G   SD
Sbjct: 287 PISRIDYIW-SPSFTRILSNSNNDTNQDSDDDNDNDESYEVTLKQFGILSNWFNGHHFSD 345

Query: 295 HCPISIDYD 303
           H P+   Y+
Sbjct: 346 HRPVVSTYE 354


>gi|300774843|ref|ZP_07084706.1| endonuclease/exonuclease/phosphatase family protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300506658|gb|EFK37793.1| endonuclease/exonuclease/phosphatase family protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 396

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 80/296 (27%), Gaps = 36/296 (12%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
           ++  G  ++K  +       + +          +V L E+ +   +  +  +     +  
Sbjct: 105 AKNYGTKIYKAKLANEAKVISEMGAQYTKTAPAVVGLIEVENRQVIQDLVNEPALKKYDY 164

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEIN 153
                N         I  A+  +K+           L+   D+  R   R  + +   ++
Sbjct: 165 GIIHYNS---YDYRGIDVALIYQKRRFTPTNSLKKELVIYGDNGKREYTRDILVVTGFLD 221

Query: 154 GKKIWVLDIHLKSFCFLDSLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
            +K+     H  S    +++     + + +LL QQ   ++       +        GDFN
Sbjct: 222 NEKVAFFMNHWPSRRGGEAISLPKRNAAAALLKQQMDSVRA-----ADPTTKLFAMGDFN 276

Query: 213 RKINYLGNNDDFWKTIDPND------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
                    +      +P D       L            +          D  ++ +N 
Sbjct: 277 DDPVSPSLKNHLKAQANPKDLSEETPYLNLMYPLYKKGVASLAYQDAPNLFDQIIVSKNL 336

Query: 267 YKFLIQESFSE--------------------ILYNEDDIKSRGKRLSDHCPISIDY 302
               + + +S                       +   +        SDH P  +  
Sbjct: 337 ISDQVTKEYSVYKTEIFAPAYLVNKEGNYKGYPFRSWNGDQFTGGYSDHFPAFVVL 392


>gi|167736590|ref|ZP_02409364.1| exodeoxyribonuclease III [Burkholderia pseudomallei 14]
          Length = 256

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 85/305 (27%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +               ++    +AD V +QE+       KV
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEI-------KV 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F     L +H           A    ++          ++G   S   A  R
Sbjct: 40  SADDLPAEFVEPHGLRSHFHHAQKKGYSGAGLYSRREP-----DDVIIGYGSSEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ V+ +++ S    D  +                L        ++  
Sbjct: 95  Y-----VEARFGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KAKR 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +  +   +   +  D R    
Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDDVGYVDVFRTLDPRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +            S             R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKNTSI-----------FRDIKFSDHAPLT 250

Query: 300 IDYDF 304
           +DYD+
Sbjct: 251 VDYDY 255


>gi|317418621|emb|CBN80659.1| '2',5'-phosphodiesterase 12' [Dicentrarchus labrax]
          Length = 562

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/326 (13%), Positives = 85/326 (26%), Gaps = 52/326 (15%)

Query: 23  KVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            VR+VS+NI         LS+            +      L+++     +ADIV LQE+ 
Sbjct: 243 SVRVVSYNILADIYAQTELSKNVLYPYCAPYALQLDYRQNLIKKELAGYNADIVCLQEVD 302

Query: 76  S---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-------- 124
                +++            +  +   +             +  R   +           
Sbjct: 303 KVVFTDSLTPALDAFGLDGVFRVKEKQHEGLATYYRRSKFQLLSRHDIMLSEALTSDPIH 362

Query: 125 ------QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                   +   L  K        + +V   +   G+K+ V + HL       ++     
Sbjct: 363 SALLEKVSANSALKDKILMRSTALQVSVLEDLNKPGRKVCVANTHLYWHPKGGNVR---- 418

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                +    Q L   I +      P V  GDFN   N  G      + + P        
Sbjct: 419 --LVQMGVALQHLSHVINEVAP-GAPLVFCGDFNSTPNS-GVFQLVSEAVVPQQHPDWSS 474

Query: 239 KEKDSRC-------------------NANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEI 278
              +  C                     N        +DY  +  ++ +        +  
Sbjct: 475 SGPEESCSMELLSTFPPLLSACSQPAYTNYVGGFHGCLDYIFIQPDSMQVEQMIPLPTHQ 534

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304
                +        SDH  +  D  +
Sbjct: 535 EVTTYEALPSVAHPSDHIALICDLRW 560


>gi|315918688|ref|ZP_07914928.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2]
 gi|313692563|gb|EFS29398.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2]
          Length = 289

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 69/286 (24%), Gaps = 46/286 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYN 78
            +R+ ++N+              +    T+    + Q  K+ D +I   +E      SY 
Sbjct: 44  SMRVATYNLQ-----------VETGTGWTNRRERVAQLIKDYDFEICGFEEASWEQRSYL 92

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                           T    N +   S      +        R      P + +     
Sbjct: 93  GTQLASDYQILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPDIPSNGWDE 152

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  V    + +  +              ++                Q L D ++ K
Sbjct: 153 TNFKRFCVWGKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVSDK 201

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            +   P    GDFN   +         +          + +              K  ID
Sbjct: 202 AKDNTPAFCTGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTRID 258

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302
           +  +          +  + +             LSDH P  I ++ 
Sbjct: 259 FIFV----------KHATVLSTRTIVSS-----LSDHYPMVIVVEI 289


>gi|307324753|ref|ZP_07603959.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
 gi|306889635|gb|EFN20615.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
          Length = 380

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/295 (10%), Positives = 74/295 (25%), Gaps = 40/295 (13%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +      ++++N+  L E         +    +               DIV +QE  +Y+
Sbjct: 38  AATGTFNVLTYNVAGLPEGLSSGHPAKNTPLISPRLGA---------YDIVNVQEDFNYH 88

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A       + +    S               +   +           +         +  
Sbjct: 89  AALYAGDDHPYRTPTSG-----------GAGLGDGLNTLSGLPYDDFERVKWNRCNGTDC 137

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  +  +    G  + + ++H  +               +        L D+I   
Sbjct: 138 LTPKGFTLARVRPAEGAYLDLYNVHTNAGTTD--------ADLAARRANVTQLSDYI-TA 188

Query: 199 KESLVPFVIAGDFNRKINYLG--NNDDFWKTIDPNDSLIRFPKEKDSR-------CNANK 249
             +    ++ GD N +         D   +    +  +                 C+   
Sbjct: 189 NSAGNAVLVMGDTNTRYTRAADNIRDLATRNGLTDAWVDLVRGGSAPPAGSDALVCDPEN 248

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  +D  +        L    +     +   + + GK LSDH P ++D  +
Sbjct: 249 VTDTCEVVDKVLYRSGPLLSLAATRYH--NEHTSFLDAEGKPLSDHYPHTVDLSW 301


>gi|19745558|ref|NP_606694.1| 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS8232]
 gi|19747679|gb|AAL97193.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS8232]
          Length = 275

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++     +  S  +     +       KN      ++P +GA  +    G  
Sbjct: 55  KHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVSTFPEIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +V  ++  +        +         +     L        ++  
Sbjct: 114 -----IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWDHKYADYLTEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + AGD+N               R   +       +  +        F        +  
Sbjct: 161 PVLAAGDYNVAHKEIDLANPSSNRRSPGFTDEERQSFTNLLARGFTDTFRHLHGDIPHVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMISSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            +D D
Sbjct: 270 LLDID 274


>gi|149175989|ref|ZP_01854606.1| deoxyribonuclease gamma (precursor) [Planctomyces maris DSM 8797]
 gi|148845143|gb|EDL59489.1| deoxyribonuclease gamma (precursor) [Planctomyces maris DSM 8797]
          Length = 343

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/288 (10%), Positives = 76/288 (26%), Gaps = 37/288 (12%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-- 75
               + +R+ ++NI              S  +      +L +  +    D+V +QE+   
Sbjct: 71  PRSDETIRIATFNIQVFGH---------SKMQKPEVPQILARIIQQF--DVVAVQEIRAL 119

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             + + +               +     R ++ + +       +     + +Y ++   D
Sbjct: 120 DQSFLDEFLKILNAGEQQYGCLVGPRQGRTASKEQYAYFYNTARITVNEKWTYTVIDKYD 179

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              R         L   +        I++ +       E                +   +
Sbjct: 180 KLHRPPYVAHFRTLSPSSSNPFTFSLINIHTDPDETDQELNV----------LDDVYRVV 229

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                     ++ GD N    +LG                       +  N  K+ +   
Sbjct: 230 ANDGSQEDDVILLGDLNVDDQHLGE---------LGQVSDIMWTVSKTPTNTRKSKQY-- 278

Query: 256 PIDYFVMDQNAYKFLIQES-FSEILYNEDDIKSRGKRLSDHCPISIDY 302
             D  +  +   +    +S   +        +     +SDH PI  ++
Sbjct: 279 --DNILFSRRRSQEFTGKSGVYDFRTRFKLSEKEALTVSDHLPIWAEF 324


>gi|108797936|ref|YP_638133.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS]
 gi|119867032|ref|YP_936984.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS]
 gi|108768355|gb|ABG07077.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS]
 gi|119693121|gb|ABL90194.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS]
          Length = 255

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 74/307 (24%), Gaps = 81/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +R+ ++NI                     D   L Q  + LDADIV LQE+  +      
Sbjct: 1   MRVATFNILHGRSVHDG----------EVDVDRLAQSIRELDADIVALQEVDLHQPRSGT 50

Query: 79  -----AVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                  A+     +     +         +  + R+        IA+  +      Q  
Sbjct: 51  TDLTAVAAEAMRAVSHRFVAAIAGTPGATWMAATGREQPGTAAYGIALLSRFPAETWQVV 110

Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            L      F                 R A+    +     + V + HL      +     
Sbjct: 111 RLPRIPVPFPMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSFVPGWN----- 165

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                     Q + L   +   +    P ++ GD N                        
Sbjct: 166 --------RVQMRHLVRDLRGFEG---PRMLLGDLNMSPP---------------TPARW 199

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                               +D+ +   +    + + S   +             +SDH 
Sbjct: 200 ARMRSLGEGLTFPAHAPDRQLDHVL-TDDPRLRVEKCSAVSLP------------ISDHR 246

Query: 297 PISIDYD 303
            + +D  
Sbjct: 247 ALVVDIS 253


>gi|53717833|ref|YP_106819.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|53724973|ref|YP_102006.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344]
 gi|67642475|ref|ZP_00441231.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4]
 gi|76809547|ref|YP_331785.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b]
 gi|121600000|ref|YP_994076.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1]
 gi|124386596|ref|YP_001028261.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229]
 gi|126438610|ref|YP_001057228.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668]
 gi|126449280|ref|YP_001081905.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247]
 gi|126452249|ref|YP_001064469.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a]
 gi|134284078|ref|ZP_01770772.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305]
 gi|167001940|ref|ZP_02267730.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20]
 gi|167717548|ref|ZP_02400784.1| exodeoxyribonuclease III [Burkholderia pseudomallei DM98]
 gi|167813690|ref|ZP_02445370.1| exodeoxyribonuclease III [Burkholderia pseudomallei 91]
 gi|167822205|ref|ZP_02453676.1| exodeoxyribonuclease III [Burkholderia pseudomallei 9]
 gi|167843799|ref|ZP_02469307.1| exodeoxyribonuclease III [Burkholderia pseudomallei B7210]
 gi|167892298|ref|ZP_02479700.1| exodeoxyribonuclease III [Burkholderia pseudomallei 7894]
 gi|167900793|ref|ZP_02487998.1| exodeoxyribonuclease III [Burkholderia pseudomallei NCTC 13177]
 gi|167909017|ref|ZP_02496108.1| exodeoxyribonuclease III [Burkholderia pseudomallei 112]
 gi|167917055|ref|ZP_02504146.1| exodeoxyribonuclease III [Burkholderia pseudomallei BCC215]
 gi|217424907|ref|ZP_03456403.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576]
 gi|226194644|ref|ZP_03790239.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9]
 gi|237810366|ref|YP_002894817.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346]
 gi|242317805|ref|ZP_04816821.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b]
 gi|254177087|ref|ZP_04883744.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399]
 gi|254182229|ref|ZP_04888826.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655]
 gi|254188156|ref|ZP_04894668.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237]
 gi|254196563|ref|ZP_04902987.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13]
 gi|254203686|ref|ZP_04910046.1| exodeoxyribonuclease III [Burkholderia mallei FMH]
 gi|254208662|ref|ZP_04915010.1| exodeoxyribonuclease III [Burkholderia mallei JHU]
 gi|254260883|ref|ZP_04951937.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a]
 gi|254295731|ref|ZP_04963188.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e]
 gi|254360283|ref|ZP_04976553.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280]
 gi|52208247|emb|CAH34178.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|52428396|gb|AAU48989.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344]
 gi|76579000|gb|ABA48475.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b]
 gi|121228810|gb|ABM51328.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1]
 gi|124294616|gb|ABN03885.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229]
 gi|126218103|gb|ABN81609.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668]
 gi|126225891|gb|ABN89431.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a]
 gi|126242150|gb|ABO05243.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247]
 gi|134244530|gb|EBA44634.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305]
 gi|147745198|gb|EDK52278.1| exodeoxyribonuclease III [Burkholderia mallei FMH]
 gi|147750538|gb|EDK57607.1| exodeoxyribonuclease III [Burkholderia mallei JHU]
 gi|148029523|gb|EDK87428.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280]
 gi|157806098|gb|EDO83268.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e]
 gi|157935836|gb|EDO91506.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237]
 gi|160698128|gb|EDP88098.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399]
 gi|169653306|gb|EDS85999.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13]
 gi|184212767|gb|EDU09810.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655]
 gi|217391927|gb|EEC31953.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576]
 gi|225933345|gb|EEH29337.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9]
 gi|237506823|gb|ACQ99141.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346]
 gi|238523636|gb|EEP87073.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4]
 gi|242141044|gb|EES27446.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b]
 gi|243062348|gb|EES44534.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20]
 gi|254219572|gb|EET08956.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a]
          Length = 256

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 85/305 (27%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +               ++    +AD V +QE+       KV
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEI-------KV 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F     L ++           A    ++          ++G   S   A  R
Sbjct: 40  SADDLPAEFVEPHGLRSYFHHAQKKGYSGAGLYSRREP-----DDVIIGYGSSEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ V+ +++ S    D  +                L        ++  
Sbjct: 95  Y-----VEARFGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KAKR 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +  +   +   +  D R    
Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDDVGYVDVFRTLDPRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +            S             R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKNTSI-----------FRDIKFSDHAPLT 250

Query: 300 IDYDF 304
           +DYD+
Sbjct: 251 VDYDY 255


>gi|152002965|gb|ABS19620.1| DNA lyase [Coccidioides posadasii]
          Length = 606

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/335 (11%), Positives = 75/335 (22%), Gaps = 78/335 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
            +RL +WN+N +        W     R    +  +    +    DI+  QE  +   +  
Sbjct: 2   PLRLTTWNVNGIRNPFSYQPW-----RENKSFERMFDILEG---DIIVFQETKIQKRDLR 53

Query: 81  AKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR-------------KKNVRVLQQ 126
             +     W  F+S       +S             +R                      
Sbjct: 54  DDMVLIPGWDCFFSLPRHKKGYSGVVIYTRCSACSPIRAEEGLTGTLSSPGSPLPYRELP 113

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
               +G   +  +        + ++  G+ + +L+        +    N         + 
Sbjct: 114 EDDQIGGYPTPEQLELLPIDPVTIDSEGRCV-ILEFPAFVLLGVYCPANRDETRDVFRAA 172

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGNNDDF 224
               L   +          V+ GD N                             +   F
Sbjct: 173 FLNVLDMRVRNLTAMGKRVVLMGDMNISREVIDSAHVIEAIRKGKTTETEFLSSPSRRLF 232

Query: 225 WKTIDPND-----------SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQ 264
            + +                L    K    R                     IDY +   
Sbjct: 233 NQLVGGGGARAKDSEDTPVLLDVCRKFHPDRLGMYTCWEQRVNARPGNYGARIDYVLCSV 292

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +   +  + +              G   SDHCP+ 
Sbjct: 293 DMEDWFTESNIQ-----------EGLMGSDHCPVY 316


>gi|126310825|ref|XP_001378942.1| PREDICTED: similar to sphingomyelin phosphodiesterase 2, neutral
           membrane (neutral sphingomyelinase) [Monodelphis
           domestica]
          Length = 614

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 82/320 (25%), Gaps = 51/320 (15%)

Query: 13  LVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           ++P   S +     +++  +N+N               K        L       + D+ 
Sbjct: 173 VLPTMESESGSSVSLKV--FNLNC-------WAIPYMSKHQQVRMQHLGDLLNQKNFDLA 223

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+ S      +  K      ++            +  I + + V  K+       + 
Sbjct: 224 LLQEVWSERDFESLRQKLLPNYTWA--------HYFRSGFIGSGLCVFSKHPIQEIFQHT 275

Query: 130 L-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
                             +    +++EI G  + V   HL +          +    +  
Sbjct: 276 FSLNGYPYKLHHGDWFCGKAVGMVVLEICGILVNVYVTHLHA-----EYNREHDSYLAHR 330

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDS 243
             QA  L  +I          +++GD N     +G      W  +D +    +  +  + 
Sbjct: 331 VAQAWELAQFIHHTSRRADVVLLSGDLNSHPGDVGYRLIKEWIGLDDSYLETQDFQGCED 390

Query: 244 RCNANKNLRNKI-----------PIDYFVMD---------QNAYKFLIQESFSEILYNED 283
            C    N                 IDY +                              +
Sbjct: 391 GCTMVPNNCFVNSKEMESFPRGVRIDYILFKAISGFHITCDALTTTTGSGPNDTTGSGPN 450

Query: 284 DIKSRGKRLSDHCPISIDYD 303
           D    G  LSDH  +     
Sbjct: 451 DTTGHGLPLSDHEALMATLS 470


>gi|153004094|ref|YP_001378419.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
 gi|152027667|gb|ABS25435.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
          Length = 371

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 67/292 (22%), Gaps = 66/292 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A  A  +R++S+N                   T  D T +         D++ LQE+
Sbjct: 126 SAPAHGAIALRVMSYNTW----------------ATNLDATRIASVVLRYRPDVLLLQEI 169

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                       + +    S            + D+  AI  R         +       
Sbjct: 170 RGDV-------LSRFTEAASGLYAGAPLHLVYDPDLEQAIVSRYAIEPAASLARKG---- 218

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       ++++   G ++ V ++H              S        Q   L D 
Sbjct: 219 ---------NVQKVVLCAPGARVTVFNVHPP-----------RSGGWRHRYTQISALVD- 257

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252
                    P ++ GDFN                + +                +      
Sbjct: 258 -EDVLREDGPVILGGDFNAPDRSQLYERVSSALANAHAQRGLGFGFTYPALVRSPFGPVP 316

Query: 253 --NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + ID+     +                           SDH P+ ++ 
Sbjct: 317 TVPLVRIDHLFFSDHFVA-------------VRAGTLDDSGGSDHRPVFVEL 355


>gi|325282271|ref|YP_004254812.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus
           MRP]
 gi|324314080|gb|ADY25195.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus
           MRP]
          Length = 326

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 75/287 (26%), Gaps = 59/287 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                   + L+++NI                + T      L    +  DAD+V LQE  
Sbjct: 97  PQPVPPGSLTLLTYNI---------------ARGTQGSAETLAAQIRAQDADLVTLQETN 141

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            ++A            F             ++      +    +   +  +   L     
Sbjct: 142 GWDA-----------EFTPELLRRLPGYHAAHTGAGGELLTLSRLPVLGSREVHLPET-- 188

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  RR +   V+    ++ V+++H  +            P+ +  + Q   L+   
Sbjct: 189 ------TRRFLVTTVQTPRGQLDVVNVHFSTVMVSGVFRGQVIPTRNRRATQLDRLQRET 242

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            Q        ++AGDFN             K ++  D+                +    +
Sbjct: 243 AQLPR----VLVAGDFNTPPRGRVYRALSGKFVNAWDAA------GQGFGFTFPSRLPAL 292

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+          L       +              SDH  + +  
Sbjct: 293 RIDHVFARG-----LQPLRAEVLPA----------GGSDHRGLRVVL 324


>gi|326917345|ref|XP_003204960.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Meleagris
           gallopavo]
          Length = 366

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 88/287 (30%), Gaps = 46/287 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              L++WNI+ L                      +  Y      D+VFLQE+        
Sbjct: 117 SFSLITWNIDGLDLGN-----------LQERARGVCSYLTLYSPDVVFLQEV-------- 157

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +                + +   TA+ ++K  V+VL+Q             +  
Sbjct: 158 ---IPPYLCILQRRAGGYTIIPGNVDGYFTAMLLKKPRVKVLKQEIIRFPTT-----SMM 209

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  + + V I+G ++ ++  HL+S                   +Q Q + + + + +   
Sbjct: 210 RNLLVVHVNISGNELCLMTSHLEST----------RDHSKERMKQLQIVLNKMQE-ESES 258

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKIP 256
              +  GD N + + +       K I      +      R+  +  S  N     + K+ 
Sbjct: 259 TTVIFGGDTNLRDSEVAKLGGLPKNITDVWEFLGKPQHCRYTWDTSSNTNLRIESKCKLR 318

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            D       A    I      +     +    G+  SDH  +   +D
Sbjct: 319 FDRLYFRPAAEGGHI--IPRNMDLIGLEKLDCGRFPSDHWGLLCHFD 363


>gi|159906029|ref|YP_001549691.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C6]
 gi|159887522|gb|ABX02459.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C6]
          Length = 249

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 80/302 (26%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N +                         + +    DI+ +QE    +     
Sbjct: 1   MKMISWNVNGIRACLKNGFM---------------NFLERESPDIMCIQETKVQSG-QVQ 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++      +S       I     +               G  ++      R
Sbjct: 45  LGLDGYFQYWNYAERKGYSGTAVFTKIKPNEVI--------------YGIGNNEHDGEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + ++++++  +     +                + L+        +  
Sbjct: 91  -----VITLKFDEYYLVNVYTPNSQRGLTRLEYRQKWDQDFLNYVKTLE--------NKK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P +  GD N     +   +      +               N   +   +E +   +   
Sbjct: 138 PVIFCGDLNVAHKEVDLKNPKTNVKNAGFTPEERKGFDNIVNSGFLDTFREFNKEPDNYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + ++    L            D         SDHCP+ I
Sbjct: 198 WWSYRFNARARNIGWRIDYFCISESLRGNLK-----------DAFIMPEIMGSDHCPVGI 246

Query: 301 DY 302
            +
Sbjct: 247 IF 248


>gi|325474290|gb|EGC77478.1| exodeoxyribonuclease III [Treponema denticola F0402]
          Length = 256

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 80/304 (26%), Gaps = 84/304 (27%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------SYN 78
            ++SWN+N +   E                     +    + D++ +QE        S  
Sbjct: 3   SIISWNVNGIRAVEKKGF---------------LDWLNTENPDVLCVQETKAAKAQLSKE 47

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                 P   +  ++++ +   +          +  A+  K   +  ++  L    D   
Sbjct: 48  LTEADLPNGKYFAYWASAKKAGY----------SGTAIFTKKEPLQVRTMGLKEFDDEGR 97

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                     ++  +  K+ ++  +  +     +  +     C         + ++    
Sbjct: 98  ----------VLVADFDKVSIISAYFPNSQDGGARLDYKLDFC-------AAILEFCDSV 140

Query: 199 KESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +E     ++ GDFN                   YL     +      +     F      
Sbjct: 141 QEEGNNVILCGDFNIAHKPIDLANPKSNEKNPGYLPEERAWMDEFTSSGYTDTFRHFCQE 200

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           +DY  ++ +    + +    +           G   SD
Sbjct: 201 PAK-YTWWSYRFRAREKNIGWRLDYHCVNDSFLAKIKESIILD-----------GVMGSD 248

Query: 295 HCPI 298
           HCP+
Sbjct: 249 HCPV 252


>gi|311696215|gb|ADP99088.1| endonuclease/exonuclease/phosphatase [marine bacterium HP15]
          Length = 286

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/286 (11%), Positives = 78/286 (27%), Gaps = 56/286 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFLQEMGS 76
           +RL+++NI           +     +          +   +    +    D+V LQE   
Sbjct: 38  IRLLTFNIQVGINTSSYRHYLTRSWQHILPHRNRIENLDRIASLLRGY--DVVALQECDG 95

Query: 77  YNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +  +    +  +    +          R+       +  +  +   +    + L G   
Sbjct: 96  GSLRSGYINQVQYLAEAAGIPYWYQQLNRNLGQIAQHSNGLLSRYRPLDVTEHKLPGL-- 153

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R A+          + ++ +HL                    + Q + L  +I
Sbjct: 154 ----IPGRGAIIARYGTEHDPLVLVLMHLSL----------------SKTAQQRQL-GYI 192

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            +        V+ GD N               +   D +           ++  + R + 
Sbjct: 193 RELIADYRHVVLMGDMNA----HAEQLLTQTPLRETDLVPL-----PDTAHSFPSWRPEK 243

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +D+ ++  +      +                   +SDH PI++D
Sbjct: 244 ALDHILVSPSLEIRRSEVV--------------SYPMSDHLPIAMD 275


>gi|170783171|ref|YP_001711505.1| putative nuclease [Clavibacter michiganensis subsp. sepedonicus]
 gi|169157741|emb|CAQ02943.1| putative nuclease [Clavibacter michiganensis subsp. sepedonicus]
          Length = 281

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/322 (11%), Positives = 86/322 (26%), Gaps = 84/322 (26%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              +R+ S N N +                 +    +  +    D DI+ +QE+ +  + 
Sbjct: 2   PSNLRVASINTNGIRA---------------AFRKGMGDWLDTRDVDILAIQEVRAETSD 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +      W + +                    +A+  +    + +        DS  R 
Sbjct: 47  IEGLLGPEWNVLHDAATAKG----------RAGVAIASRRRAEIHRVAIGAEDFDSAGRW 96

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +E   +++G  + V+  ++ S     + ++          +    ++  + +  E
Sbjct: 97  -----LEADYDVDGTIVTVVSAYVHSGEVGTAKQDEK-------WRFLDGMEKRLPEIAE 144

Query: 201 SLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSR 244
                V+ GD N     L   +                   + +      +         
Sbjct: 145 HSELAVVVGDLNVGHRELDIRNWKGNVKRAGFLPRERAYLDRILGARGEDVTGVDGSTGP 204

Query: 245 C---------------NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
                                   +           IDY +      + ++        Y
Sbjct: 205 GLGWVDVGRQQAGEVDGPYTWWSWRGKAFDNDTGWRIDYQLATPALAEKVVG-------Y 257

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
             D  ++  KR SDH P+ +DY
Sbjct: 258 AVDRAEAYDKRWSDHTPVVVDY 279


>gi|217035255|pdb|2VOA|A Chain A, Structure Of An Ap Endonuclease From Archaeoglobus
           Fulgidus
 gi|217035256|pdb|2VOA|B Chain B, Structure Of An Ap Endonuclease From Archaeoglobus
           Fulgidus
          Length = 257

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 77/306 (25%), Gaps = 77/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N                   S   ++  + K    DI+ +QE    N     
Sbjct: 2   LKIATFNVN----------------SIRSRLHIVIPWLKENKPDILCMQETKVENR---- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    I +    S +     +A+                 KD        
Sbjct: 42  ------KFPEADFHRIGYHVVFSGSKGRNGVAIASLEEPEDVSFGLDSEPKDEDR----- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                L+      I V++ ++     +DS +  Y        Q  + L  ++ +  +   
Sbjct: 91  -----LIRAKIAGIDVINTYVPQGFKIDSEKYQYK------LQWLERLYHYLQKTVDFRS 139

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V  GD N                    +      + K ++     +   ++       
Sbjct: 140 FAVWCGDMNVAPEPIDVHSPDKLKNHVXFHEDARRAYKKILELG--FVDVLRKIHPNERI 197

Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +             D  +      +  +           D      ++ SDH P
Sbjct: 198 YTFYDYRVKGAIERGLGWRGDAILATPPLAERCVDCYA-------DIKPRLAEKPSDHLP 250

Query: 298 ISIDYD 303
           +   +D
Sbjct: 251 LVAVFD 256


>gi|118361193|ref|XP_001013827.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89295594|gb|EAR93582.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 279

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 77/292 (26%), Gaps = 60/292 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +K++ +S+N+                         LR+     D D + LQE+       
Sbjct: 34  EKLKFISYNVWF------------EKHNFEERNIELRKIFLQFDPDFICLQEVTQD---- 77

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                    IF   +    +    S+      + +  K                 F    
Sbjct: 78  -----FLQLIFSDDQICDKYYFSSSSLVQAYDVLILSKYPI--------PFKCRYFPSEM 124

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +  ++ IN   I +   HL+S  + D               Q   ++D     +ES
Sbjct: 125 GRNLLFGVITINDIDISIGTTHLESIDYNDDY----------RLCQLTAIEDQFKSYQES 174

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               ++ GDFN        N          D        ++            I  D  +
Sbjct: 175 ----ILMGDFNFAKKSEDQNIPE----GYYDVWHALHPNEEGHTMQASQQYPSIRFDRII 226

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKR---------LSDHCPISIDYDF 304
                 +    +     L   D + S   +          SDH  + ++  F
Sbjct: 227 ----LKQSENWKPSHIELIGRDPLPSYQSKQFAPFEIITPSDHYGLYLELSF 274


>gi|99078734|ref|YP_611992.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040]
 gi|99035872|gb|ABF62730.1| Endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040]
          Length = 341

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 83/311 (26%), Gaps = 56/311 (18%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           L +         +  +R+ ++N     +  G+ L      R       +        ADI
Sbjct: 14  LFWTSASDAGPQSGTLRVATFNTELSRKGPGLLLRDLR--RGDDQIRAVVGTIVEAGADI 71

Query: 69  VFLQEMG------SYNAVAKVFPKNTWCIFYSTERLINHS-------------------K 103
           + LQ +       S  A+            Y+     N                      
Sbjct: 72  LALQGVDWDYDLYSLRALQHRLKGAGQDYPYAFAVRPNSGLASGLDLDGDGRLAEPEDSW 131

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLG-------------------AKDSFSRAGNR- 143
                     IA+  K+     ++  L                       D+ + A  R 
Sbjct: 132 GWGQFTGQGGIALLSKHPIAASKAVNLTDMLWKDLPGHRMPVTLDGTLYPDAETAARLRL 191

Query: 144 -----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                 AV + +E NG+ +W+L  H     F  + +     +   +      L   +  +
Sbjct: 192 SSTNHWAVPVTLE-NGQFLWILSFHAAPPVFDGAEDRNGRRNADEILIWTYLLDGTLDAQ 250

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-KIPI 257
                PFV+ GD N         +D    +  +  L       ++  ++        + +
Sbjct: 251 IPD--PFVLMGDANNDPERGEGQNDAITRLLHHPRLQDVTPSDEAGQHSVIWDSTGPMRV 308

Query: 258 DYFVMDQNAYK 268
           DY +       
Sbjct: 309 DYVLPSAGLSV 319


>gi|329941236|ref|ZP_08290515.1| exodeoxyribonuclease [Streptomyces griseoaurantiacus M045]
 gi|329299767|gb|EGG43666.1| exodeoxyribonuclease [Streptomyces griseoaurantiacus M045]
          Length = 267

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 79/309 (25%), Gaps = 73/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + S N+N L                 +      ++     AD++ LQE+    +    
Sbjct: 2   LTVTSVNVNGLRA---------------AARKGFVEWLAATSADVLCLQEVRAEPHQMPQ 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V     W + ++       +                  V +  +  P        S   
Sbjct: 47  EVREPQGWHVVHAPAAAKGRAG-----------------VSLYTRREPDAVRVGFGSTEF 89

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +     +  ++ G  + V  ++L S       ++             + L+    +    
Sbjct: 90  DVSGRYVEADLPG--VTVASLYLPSGQVGTERQDEKYRFMDEFLAYLKELR---VRAAAE 144

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTID--PNDSLIRFPKEKDS 243
               V+ GD+N   +                         + +D      +         
Sbjct: 145 GREVVVCGDWNIAHHEADLKNWRANTKNAGFLPEERAWLSRVLDAEDGGYVDVMRALHPE 204

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           ID  V      +  ++          +   S  +R SD
Sbjct: 205 VEGPYTWWSYRGRAFDNDSGWRIDLAVATPGLARRAVKGFV-------ERAASHEERWSD 257

Query: 295 HCPISIDYD 303
           H P+++ Y+
Sbjct: 258 HAPVTVVYE 266


>gi|225857433|ref|YP_002738944.1| exodeoxyribonuclease III [Streptococcus pneumoniae P1031]
 gi|225724673|gb|ACO20525.1| exodeoxyribonuclease III [Streptococcus pneumoniae P1031]
          Length = 275

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAKNADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +               +  ++    L        +   
Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 VLEID 274


>gi|126730825|ref|ZP_01746634.1| extracellular nuclease [Sagittula stellata E-37]
 gi|126708541|gb|EBA07598.1| extracellular nuclease [Sagittula stellata E-37]
          Length = 1407

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/378 (11%), Positives = 81/378 (21%), Gaps = 89/378 (23%)

Query: 15   PCTASVAQKVRLVSWNINTLSEQ------------EGVSLWKNSVKRTTSDYTLLRQYAK 62
                 V   +++ S+N+                  +      ++          +     
Sbjct: 1028 TTAPDVGGSLQVASYNVLNFFTTIDEGSNATGPNGDLDPRGADTADEFARQSAKIVDGII 1087

Query: 63   NLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               A+++ LQE+ +        +  +         Y+             + I T I   
Sbjct: 1088 GTGAEVLALQEIENNGTTAIGTLVDLLNAEGTAATYAYVDPTGTGDFIGEDAITTGIIYD 1147

Query: 118  KKNVRVLQQSYPLLGAKDSF------------------SRAGNRRAVELLVE-INGKKIW 158
               V +L   Y +     +                       NR +V    E  +G    
Sbjct: 1148 ASAVTLLHSEYLVYAEPSADATAAIAMDLASYIGGSFDDYQRNRPSVAATFEDASGNTFT 1207

Query: 159  VLDIHLKSFCFLDSLENTYSPSCSL----------------------------------- 183
            V+  H KS                L                                   
Sbjct: 1208 VVSSHFKSKGPSGLDNLAGDAETWLTNNPGNANYTTVEGLLADLYADPNYDQGDGQGFWN 1267

Query: 184  --LSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                  A  L DWI    +      + + GD N                   D +  F  
Sbjct: 1268 GVRLDAAVELADWIANTYDGGGTTNYALLGDMN-SYAEEDAVQYLDDNAGLVDLIDTFVP 1326

Query: 240  EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------- 289
                   +      +  +D  + D      +   +   I  +E  +              
Sbjct: 1327 GGQDEAYSYVFDGQRGTLDQGLADTALAAHVTGAAEWHINADEPGLIGYDTSFNDPDFYN 1386

Query: 290  ---KRLSDHCPISIDYDF 304
                  SDH P+    DF
Sbjct: 1387 DGVYASSDHDPLIFGLDF 1404


>gi|116328536|ref|YP_798256.1| exodeoxyribonuclease III [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331264|ref|YP_800982.1| exodeoxyribonuclease III [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121280|gb|ABJ79323.1| Exodeoxyribonuclease III [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124953|gb|ABJ76224.1| Exodeoxyribonuclease III [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 254

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 71/269 (26%), Gaps = 58/269 (21%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  Y ++   D +  QE     A  +  P + W     T          +    ++ +AV
Sbjct: 19  LSDYIRDRKPDFICFQE---TKATQEQIPPSLWEEGGYT-----PVFHSAEKKGYSGVAV 70

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K           +G  D F     R      + +      + + +  S    +  +  
Sbjct: 71  LYKKPP----QKITIGLGDPFFDKEGRS-----IYLEYPDFALWNSYFPSGTTGEVRQAV 121

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-------ID 229
                 L  ++A        ++++     ++ GD N        +D             +
Sbjct: 122 KMKFLDLFQKEAA-------KRRKKQPNILLCGDINIAHTPQDIHDPKGNAKSSGFLPEE 174

Query: 230 PNDSLIRFPKEKDSRCNA-------NKNLRNK---------IPIDYFVMDQNAYKFLIQE 273
                    K                     +           IDYF +     K +  +
Sbjct: 175 REWLTQFLEKGWVDTFRYLYPEKQEYSWWTFRAGARAKNKGWRIDYFFVTAELKKNVKSQ 234

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           S             R K LSDH P+ ++ 
Sbjct: 235 SI-----------YRDKPLSDHAPLELEI 252


>gi|299145528|ref|ZP_07038596.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
 gi|298516019|gb|EFI39900.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
          Length = 289

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 71/288 (24%), Gaps = 50/288 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ ++N+              +    T+    + Q  K+ D +I   +E         
Sbjct: 44  SMRVATYNLQ-----------VETGTGWTNRRERVAQLIKDYDFEICGFEEASWEQ--RS 90

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGAKDSFSRA- 140
                    +       +    D+     + I  +  +   +    +   G  D  S   
Sbjct: 91  YLGTQLASDYQILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSGTPDIPSNGW 150

Query: 141 ----GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  V    + +  +              ++                Q L D ++
Sbjct: 151 DETNFKRFCVWGKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVS 199

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            K +   P    GDFN   +         +          + +              K  
Sbjct: 200 DKAKDNTPAFCTGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTR 256

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302
           ID+  +          +  + +             LSDH P  I ++ 
Sbjct: 257 IDFIFV----------KHATVLSTRTIVSS-----LSDHYPMVIVVEI 289


>gi|296118910|ref|ZP_06837483.1| 5'-nucleotidase family protein [Corynebacterium ammoniagenes DSM
           20306]
 gi|295968008|gb|EFG81260.1| 5'-nucleotidase family protein [Corynebacterium ammoniagenes DSM
           20306]
          Length = 901

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 78/287 (27%), Gaps = 46/287 (16%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYSTERLI 99
                 +      L+AD++ L E+               A++ +                
Sbjct: 537 QDQQEKIVSAINGLNADVIALSEIEDTFAVTGDIARRDEALSTLVDALNADGGNWKYVES 596

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI-- 157
                +  + I  A       V  + +S      +D       R  +    +   + +  
Sbjct: 597 PQQVPNDPDVIRVAFIYNPDRVEPVGESRIF---EDERFTGTAREPLAQEFKPVDEDVTE 653

Query: 158 WVLDIHLKSFC-----FLDSLENTYS-PSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGD 210
             + +             D+ +      + +L   QA+ + D + ++ +       + GD
Sbjct: 654 TFVAVANHFKSKGSIAGGDADQGDGQGNNANLRVSQAEAVLDHLAKQSDWQDKATFVMGD 713

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
            N        +         +       ++  +   + +       +D+ + + N    +
Sbjct: 714 LNSYTREHAIDT------FRDAGYSIPQEDHQAAT-SYQFDGMLGSLDHVLANAN--VEV 764

Query: 271 IQESFSEILYNEDDIKSRGKRL--------------SDHCPISIDYD 303
                  I  +E       +RL              SDH P+ + ++
Sbjct: 765 QDAQVWNINADESIAFEYSRRLYNVVDYHDDSPFRSSDHDPVKVGFN 811


>gi|240102422|ref|YP_002958731.1| Metal-dependent hydrolase [Thermococcus gammatolerans EJ3]
 gi|239909976|gb|ACS32867.1| Metal-dependent hydrolase [Thermococcus gammatolerans EJ3]
          Length = 584

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 84/308 (27%), Gaps = 65/308 (21%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M    V+AL         +    + + ++N++        +               L   
Sbjct: 335 MASIVVMALFHAGPTYMGAKKDVL-VWTYNVHQGFGPYDGTFNGY----------ELVNL 383

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKK 119
                 DI F QE+        +       +       + ++       +    IAV   
Sbjct: 384 LAEQKPDIWFAQEVVGG-----MIGNGYQDVPLFVSAHLGYAYEYKPAVEGTYGIAVFSH 438

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                +    L            R A ++ +E  G  I V+++H+               
Sbjct: 439 WHMKTESELNLPSVG------EARPAQKVSIEELG--ITVVNVHMGL------------- 477

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           S    + QA+ L  +    + S V  VIAGD N + N                       
Sbjct: 478 SEEERAMQAEELLKFA---EASPVAQVIAGDTNAEPNERAIEILTR---------DYRDA 525

Query: 240 EKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             +         RN    K  IDY ++  +    +            DD       +SDH
Sbjct: 526 FPERPPYTFLWERNGVVDKENIDYILLKNDWPAEVK-----------DDGCLCDVLVSDH 574

Query: 296 CPISIDYD 303
            P+    +
Sbjct: 575 RPVWAVIE 582


>gi|167033635|ref|YP_001668866.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1]
 gi|166860123|gb|ABY98530.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1]
          Length = 257

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 76/286 (26%), Gaps = 56/286 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79
           + +++ N++                        LR+  +   AD+VFLQE+      +  
Sbjct: 21  LNVLTLNVHKGFTFFNRRF----------ILPELREAVRATGADLVFLQEVHGSHQQHAQ 70

Query: 80  VAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +P+     F +        + +           A+  K                S 
Sbjct: 71  RHAAWPETPQYEFLADSMWPQFAYGRNAVYPHGDHGNALLSKFPI-----SHFNNLDVSV 125

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  +   +E+ G    V  + +                 +   +Q   + D +  
Sbjct: 126 QGNEQRGLLHCQLEVPGHD-QVHAVCVHLGLR-----------EAHRQRQVTLMLDLLAS 173

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P ++AGDFN            W+            +       +       + +
Sbjct: 174 -LPPQAPVIVAGDFND-----------WRLKADAVLCEHLIEAFGKPARSFPARLPLLRL 221

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +        +  +   +       K     LSDH P++ + +
Sbjct: 222 DRIYLRNA-----VPGAAQVLS------KYPWSHLSDHVPLAAEIN 256


>gi|58583508|ref|YP_202524.1| hypothetical protein XOO3885 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188575228|ref|YP_001912157.1| endonuclease/exonuclease/phosphatase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58428102|gb|AAW77139.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188519680|gb|ACD57625.1| endonuclease/exonuclease/phosphatase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 255

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 85/295 (28%), Gaps = 60/295 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70
           AS ++ +R+++ NI   S     S +               +    +         DIV 
Sbjct: 3   ASDSRILRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAALVGER--DIVG 60

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           LQE    +  +    +  +    +     +H   R       +A  +  K   +  Q + 
Sbjct: 61  LQEADPGSLRSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPLEVQDHA 120

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L G      R G R  +          + V   HL                 +    Q  
Sbjct: 121 LPG------RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLA 161

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NA 247
           ++ + ++    +    ++ GDFN   +                 L R  + +   C  + 
Sbjct: 162 FIAELLSDHPNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCEVHT 206

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + R    ID+ ++  +                 +  ++     SDH  + +D 
Sbjct: 207 FPSWRPDRAIDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 247


>gi|321459337|gb|EFX70391.1| hypothetical protein DAPPUDRAFT_328284 [Daphnia pulex]
          Length = 560

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/328 (12%), Positives = 84/328 (25%), Gaps = 56/328 (17%)

Query: 24  VRLVSWNINTLSEQEGV-------SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            R+V++NI      +                        L+ +     +ADI+ LQE+  
Sbjct: 241 FRVVTYNILADLYTDSEYTRKVLHPYCPPYALAIDYRKQLILKELIGYNADIICLQEVDG 300

Query: 77  ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               + +  +F    +   +S +            +      V   +  + ++       
Sbjct: 301 KVFDSDLKPIFSSLGFGAEFSKKGGQVSEGMTCLFNTSKFRLVESCSHILAEELPKNPLV 360

Query: 134 KDSF--------------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-----E 174
            D +               R  +   + L    NGK++ V + HL      D +      
Sbjct: 361 NDLWEAVKKNEDLSKRIIDRTTSCHLLVLESLFNGKRVVVANTHLYFHPNADHIRLLQSC 420

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                + +L + Q +             V  +  GDFN             + ID ++  
Sbjct: 421 VALRLAQNLRNCQLE---------LGKEVSLLFCGDFNSTPGSGVFELMTLQHIDHDNEA 471

Query: 235 I-----------------RFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFS 276
                                    +    N        +DY   +++      +    S
Sbjct: 472 WSSKPEEAVRDLSLHNPIAMETACGTPPFTNYTSGFSGCLDYIFFEKSKLVVEQVVPLPS 531

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304
                           SDH  +  D  +
Sbjct: 532 LEEVTRHCALPSIVFPSDHIALIADLKW 559


>gi|323699266|ref|ZP_08111178.1| exodeoxyribonuclease III [Desulfovibrio sp. ND132]
 gi|323459198|gb|EGB15063.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans ND132]
          Length = 255

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 74/301 (24%), Gaps = 72/301 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + SWN+N                         R +      D+V LQE         +  
Sbjct: 3   IYSWNVNGYRAVLKKDF---------------RDWLDGCGGDVVMLQETKVEPDQLALDE 47

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +                        ++ +A       +        G  D   R   R  
Sbjct: 48  REPDSFSNHYWNWSKK------KKGYSGVACFANPEPIR----WDTGLPDDRFRDEGR-- 95

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +      + +I+  +    D   +          + AQ L+           P 
Sbjct: 96  ---VLHLEYPDFHLFNIYFPNGQMSDERLDFKMGFYDTFLEHAQALRR--------TKPI 144

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANKNL 251
           V+ GDFN     +   +    +                     +   +  +   +     
Sbjct: 145 VVGGDFNTAHREIDLKNPKANSERSGFLPVERAWIDKFIEHGYVDTFRLFEDGPHHYSWW 204

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +           IDYF + +     +++      +             SDHCPI ++ 
Sbjct: 205 SYRFNARKNNAGWRIDYFFVSEELKDKVVRAWIEPDVL-----------GSDHCPIGVEI 253

Query: 303 D 303
           D
Sbjct: 254 D 254


>gi|312843088|gb|ADR02759.1| XthA [Treponema pallidum subsp. pertenue]
 gi|313505178|gb|ADR64329.1| exodeoxyribonuclease III [Treponema pallidum subsp. pertenue]
 gi|313505198|gb|ADR64348.1| exodeoxyribonuclease III [Treponema pallidum subsp. pertenue str.
           Gauthier]
 gi|313505297|gb|ADR64434.1| exodeoxyribonuclease III [Treponema pallidum]
          Length = 264

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 73/302 (24%), Gaps = 69/302 (22%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83
           R++SWN+N +   E                     +      D++ LQE+    + ++  
Sbjct: 6   RIISWNVNGIRAIERKDF---------------LSWLAREAPDVLCLQEIKAHESQLSAA 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W                +    ++  A+  K      + + +            R
Sbjct: 51  LRAPVWSAGAGGTYY--TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAAR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                       ++ V+  +  +              C          + +  +++ +  
Sbjct: 109 F----------GELTVVSAYFPNAQEGGKRLAYKLDFC-------AAFRAFCDEERTAGQ 151

Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +                 +  W             +   +      
Sbjct: 152 HVILCGDYNIAHKEIDLAHPQENEGNPGFLPQERAWMDTFTEAGYADSFRAFCTEGQQYT 211

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY  +DQ     +        +             SDHCP+ +
Sbjct: 212 WWSYRARARARNIGWRIDYQCVDQAFLARVTSSQILSEVT-----------GSDHCPVCL 260

Query: 301 DY 302
            Y
Sbjct: 261 TY 262


>gi|156095775|ref|XP_001613922.1| sphingomyelin phosphodiesterase [Plasmodium vivax SaI-1]
 gi|148802796|gb|EDL44195.1| sphingomyelin phosphodiesterase, putative [Plasmodium vivax]
          Length = 753

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 40/219 (18%)

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + V  K+  + + +      K        + A+ L   +N K + V+  HL++    D 
Sbjct: 510 GVIVLSKHAFMHKHALIYSNCKFP-DMFCTKGAIYLKCCVNNKPVNVIATHLQAGDTSDQ 568

Query: 173 LENTYSPSCSLLSQQAQWLKDWI-----TQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                        +Q   L +W+     +   +   P    GDFN + +       F + 
Sbjct: 569 QN--------CRWKQLNELSNWVYNGAPSFHIKKNEPLFFVGDFNIRYHLD--KSFFDRV 618

Query: 228 IDPNDSLIRFPKEKDSRCNANK------------NLRNKIPIDYFVMDQNAYKF-LIQES 274
           +          K+       +             + +    +DY +++ ++    L+ ++
Sbjct: 619 LSSGCLNSSVTKKALETTYDSYLNDYCMHMERDYSFKYNYTLDYILVNNDSDVKTLVPQT 678

Query: 275 FSEILYN-----------EDDIKSRGKRLSDHCPISIDY 302
             +  Y                 +     SDH PI   +
Sbjct: 679 AIQKDYRPIQIIKSLLGFIPYKCTYIHHPSDHFPIYATF 717



 Score = 42.2 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 2/97 (2%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++S+N+  LS      +  N   R  +    +       + DI+ L E+ + N    
Sbjct: 11  TLTIMSYNVQMLSVPLSNQI--NLSTRQDAVIDYICSLDDLHNIDILVLNEVFTSNCYDM 68

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           +        F     +I    +       + + V++ 
Sbjct: 69  LTKGKVKDKFPYHTNVIGTKCQGPEKWSSSIVEVKED 105


>gi|40538842|ref|NP_848783.3| 2',5'-phosphodiesterase 12 [Mus musculus]
 gi|172044638|sp|Q3TIU4|PDE12_MOUSE RecName: Full=2',5'-phosphodiesterase 12; Short=2'-PDE; Short=2-PDE
 gi|39963618|gb|AAH64450.1| RIKEN cDNA E430028B21 gene [Mus musculus]
          Length = 608

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 33/314 (10%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + P           R+  H    +        +  +             L  + 
Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413

Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189
               A N  A E +++ +   +I VL     S    C  ++    +     +   Q +  
Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVA 473

Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236
                 +++     +P +  GDFN   +               + D      +   S+  
Sbjct: 474 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 533

Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290
               K           N        +DY  +D        +    S              
Sbjct: 534 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 593

Query: 291 RLSDHCPISIDYDF 304
             SDH  +  D  +
Sbjct: 594 HPSDHIALVCDLKW 607


>gi|26350127|dbj|BAC38703.1| unnamed protein product [Mus musculus]
          Length = 608

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 33/314 (10%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + P           R+  H    +        +  +             L  + 
Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413

Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189
               A N  A E +++ +   +I VL     S    C  ++    +     +   Q +  
Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVA 473

Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236
                 +++     +P +  GDFN   +               + D      +   S+  
Sbjct: 474 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 533

Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290
               K           N        +DY  +D        +    S              
Sbjct: 534 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 593

Query: 291 RLSDHCPISIDYDF 304
             SDH  +  D  +
Sbjct: 594 HPSDHIALVCDLKW 607


>gi|71991697|ref|NP_493169.2| hypothetical protein T27F6.6 [Caenorhabditis elegans]
 gi|33302616|sp|O45870|NSMA_CAEEL RecName: Full=Putative neutral sphingomyelinase
 gi|31441797|emb|CAB04885.2| C. elegans protein T27F6.6, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 434

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 92/322 (28%), Gaps = 50/322 (15%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F  +      A+++R+V+ N   L +      W             + QY  +   DIV 
Sbjct: 26  FAALRRNNVAARQLRVVTLNAWCLPQP-----WPIGSTDRVHRLNKIGQYMIDELYDIVG 80

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ SY    ++  +       S+     H            +  R   V  L   Y L
Sbjct: 81  LQELWSYYDFVRLSEQ------VSSVYPYFHYFHSGFTGSGVCVFSRHPIVSTLTNRYSL 134

Query: 131 LGAKDSFSRAGNRRAVEL---LVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            G      R        +    +EI+G  ++     HL +       +          + 
Sbjct: 135 NGFAHHIHRGDWFGGKVVGLTEIEIDGDLRVNFYTTHLHA-----EYDRENDLYLPHRTA 189

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKI---------------------NYLGNNDDFW 225
           QA  L  ++          ++ GD N +                      + + N D   
Sbjct: 190 QAFELAQFVRHTARGADVVIVTGDLNMEPCDLGFRLILSHAKLFDAWRMSHEVENEDSEG 249

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKI---PIDYFVM-DQNAYKFLIQESFSEILYN 281
           + +           ++   C   + L+N      IDY +         L +   +     
Sbjct: 250 ELLKFRGIAKGGTCDRPDNCYTKRALKNVDDSKRIDYMLFKSGRCNVKLEECEITL---- 305

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
            + I       SDH  +   + 
Sbjct: 306 -NQIPGEDLNYSDHVGLRARFT 326


>gi|163938364|ref|YP_001643248.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
           KBAB4]
 gi|163860561|gb|ABY41620.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
           KBAB4]
          Length = 263

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102
                L +  +  D D++ LQE+        V        F         +         
Sbjct: 18  EKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNII 77

Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  N K I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWK-TRKIVSATIAYNDKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q+      +  
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLILSNQSKTVNSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNV---------ISDHFGVEVQLD 262


>gi|330818664|ref|YP_004362369.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
           gladioli BSR3]
 gi|327371057|gb|AEA62413.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
           gladioli BSR3]
          Length = 257

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 84/305 (27%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +  +  AD V +QE+       KV
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWLGDQKADCVCVQEI-------KV 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      H           A    ++          ++G   S   +  R
Sbjct: 40  SADDLPPEFAAPHGFTGHFHHAEKKGYSGAGLYTRREP-----DDLIIGYGSSEFDSEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ V+ +++ S    +  +       +        L       K    
Sbjct: 95  Y-----VEARYGKLSVISVYVPSGSSGEERQQAKFRFMAEFMPHLAEL-------KAKKR 142

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R +  
Sbjct: 143 EVILCGDVNIVHKEIDIRNWKSNQKNSGCLPEERAWLTQLFDEVGYVDVFRTLDPRPDQY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          Q S             R  + SDH P++
Sbjct: 203 TWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKQTSI-----------FRDIKFSDHAPLT 251

Query: 300 IDYDF 304
           +DYD+
Sbjct: 252 VDYDY 256


>gi|296470685|gb|DAA12800.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Bos taurus]
          Length = 514

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +RLVSWNIN +         +     +      + +    LDADIV LQE  +       
Sbjct: 2   LRLVSWNINGIRSPLQGVRCEEPSSCSAM---AMGRILDKLDADIVCLQETKVTRDVLTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +     +A  V         +          G  D 
Sbjct: 59  PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDD 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                  E   K + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNMECFEEDPGRKWMDGLLSN 231

Query: 231 NDSLIRFPKEK------------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                         S  +  ++L     +DY + D+       Q
Sbjct: 232 LGCESGSHMGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQ 291

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            SF                 SDHCP+     
Sbjct: 292 SSF----------LLPEVMGSDHCPVGAVLS 312


>gi|219683204|ref|YP_002469587.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis AD011]
 gi|241191164|ref|YP_002968558.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241196570|ref|YP_002970125.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|219620854|gb|ACL29011.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249556|gb|ACS46496.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240251124|gb|ACS48063.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|289177272|gb|ADC84518.1| Exodeoxyribonuclease III [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295794157|gb|ADG33692.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis V9]
          Length = 286

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 42/275 (15%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-----NNDIHTA 113
            +AK    ++  +QE  +   +           +    ++ +  +  +            
Sbjct: 23  HWAKAHTPNVWCMQETRAPQEIIADIYGELAADYVHAGKIASPEELHTLVDVCRIKGRAG 82

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + +      +  +       +D  S    R     +    G  I V+ +++ +   +D  
Sbjct: 83  VGMISDMPVLETRVGLPGLEEDVDS---GRWIEADVRTEQGYVITVVCVYVHAGGLVDDP 139

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------Y 217
           +         L    + ++    +        V+ GDFN   N                +
Sbjct: 140 KEAQK--YRFLDTMTERMQQLQDEAASGGRQAVVCGDFNIAHNPIDLKNPKSNENNNGYF 197

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYK 268
                   K ID  D +                   +           +DY        +
Sbjct: 198 PRERAYMDKWIDQMDYVDVMRDLAGDIQGPYTWWSQRGRAFDNDSGWRLDYQFATPELAQ 257

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +  D   S   R SDH P++I YD
Sbjct: 258 QARG-------FVVDRASSYDSRWSDHAPLTISYD 285


>gi|168008755|ref|XP_001757072.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691943|gb|EDQ78303.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 536

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 83/303 (27%), Gaps = 58/303 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+ SWN+N L          ++             + + L+ADIV  QE       + K
Sbjct: 82  MRIFSWNVNGLRTTLKDVAACHTSASN--------YFCQVLNADIVCFQEAKIQEEKLEK 133

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    ++S        K  S    +   A+   +    +  +    +         
Sbjct: 134 WIA--CVDGYHSHWAFSREKKGYSGVVTYVKEAL---SPLDAKADWLGENSSAEDLCNEG 188

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +  +     +L++++ +    D       P      +  + L+        S 
Sbjct: 189 RL-----MCTDHGSFVLLNVYVPNSGDGD----KGRPRLDFKMRYLKALEQTCDDLVRSG 239

Query: 203 VPFVIAGDFNRKIN--------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              VI GDFN                   L   +     +     +  +        N  
Sbjct: 240 KHIVIVGDFNVAHKDIDVHSRWKVEEIYSLEEREWLDGFLSR--YIDLYRHFHPDEKNIF 297

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                K           IDY + ++     ++          E DI    K+ SDH  + 
Sbjct: 298 SVWDQKSDARTRNEGLRIDYAICNEGFLTEVL----------ETDIVKMQKQWSDHAAVV 347

Query: 300 IDY 302
           +  
Sbjct: 348 VTL 350


>gi|90579026|ref|ZP_01234836.1| hypothetical protein VAS14_04953 [Vibrio angustum S14]
 gi|90439859|gb|EAS65040.1| hypothetical protein VAS14_04953 [Vibrio angustum S14]
          Length = 379

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/375 (10%), Positives = 92/375 (24%), Gaps = 86/375 (22%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +       Q +R+  +N+   SE E   +++ +   T   +  L    ++++AD++ L 
Sbjct: 4   FLATVLETKQSLRVAMFNVAM-SEPEQGRIFQQTSGLTHKRFQRLAAIIQHVNADVLLLC 62

Query: 73  EMGSYN--AVAKVFPKNTWCIFYSTERLINHSKR-------------------------- 104
           E                       ++   +                              
Sbjct: 63  EFDHPGNGGDDGSLDNFCQHYLSHSQYQQSAIDYPYRYCPSSNTGLITEIDLNGDGVCTL 122

Query: 105 ------DSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRAV-- 146
                       H    +  K              L +  P       +     +  +  
Sbjct: 123 PEDAQGYGEFHGHFGFVILSKYPLQQENIRTWQHFLWKDMPNNLMPVDYYSKEAQHILRL 182

Query: 147 ------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---WITQ 197
                  + + +  K+I +L  H     F  S       +   +      + D    +  
Sbjct: 183 SSKNHVVVPIVVEDKEINLLCCHPTPPVFDGSERRNAKRNHDEIQFLIDIINDESYLVDD 242

Query: 198 K-----KESLVPFVIAGDFNRKINYLGNNDDFWKTI-----------------DPNDSLI 235
                  +    F++ GD N  I+         K +                     +  
Sbjct: 243 NGQVGGLKPDDAFIVMGDLNADIDDGDGFKAAIKHLLKLDKINTRVSSGKQTPKSEGARH 302

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD-------IKSR 288
            +P +K +           + +DY +  +N    +    F    ++           + +
Sbjct: 303 YYPWQKRTGRKNEWTHLAGLRLDYVLPSKNL-DVIETGVFWPDKHDSLRELILDCKGREK 361

Query: 289 GKRLSDHCPISIDYD 303
               SDH  +  D +
Sbjct: 362 PSAGSDHRMVWADIN 376


>gi|61554419|gb|AAX46554.1| apurinic/apyrimidinic endonuclease 2 [Bos taurus]
          Length = 407

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +RLVSWNIN +         +     +      + +    LDADIV LQE  +       
Sbjct: 2   LRLVSWNINGIRSPLQGVRCEEPSSCSAM---AMGRILDKLDADIVCLQETKVTRDVLTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +     +A  V         +          G  D 
Sbjct: 59  PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDD 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                  E   K + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNMECFEEDPGRKWMDGLLSN 231

Query: 231 NDSLIRFPKEK------------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                         S  +  ++L     +DY + D+       Q
Sbjct: 232 LGCESGSHMGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQ 291

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            SF                 SDHCP+     
Sbjct: 292 SSF----------LLPEVMGSDHCPVGAVLS 312


>gi|62751813|ref|NP_001015577.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Bos taurus]
 gi|73921675|sp|Q5E9N9|APEX2_BOVIN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName:
           Full=APEX nuclease 2; AltName:
           Full=Apurinic-apyrimidinic endonuclease 2; Short=AP
           endonuclease 2
 gi|59858127|gb|AAX08898.1| apurinic/apyrimidinic endonuclease 2 [Bos taurus]
          Length = 514

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +RLVSWNIN +         +     +      + +    LDADIV LQE  +       
Sbjct: 2   LRLVSWNINGIRSPLQGVRCEEPSSCSAM---AMGRILDKLDADIVCLQETKVTRDVLTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +     +A  V         +          G  D 
Sbjct: 59  PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDD 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                  E   K + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNMECFEEDPGRKWMDGLLSN 231

Query: 231 NDSLIRFPKEK------------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                         S  +  ++L     +DY + D+       Q
Sbjct: 232 LGCESGSHMGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQ 291

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            SF                 SDHCP+     
Sbjct: 292 SSF----------LLPEVMGSDHCPVGAVLS 312


>gi|49183387|ref|YP_026639.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Sterne]
 gi|165870723|ref|ZP_02215376.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0488]
 gi|167634744|ref|ZP_02393063.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0442]
 gi|167641246|ref|ZP_02399499.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0193]
 gi|170688988|ref|ZP_02880189.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0465]
 gi|170707115|ref|ZP_02897571.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0389]
 gi|177654552|ref|ZP_02936408.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0174]
 gi|190567531|ref|ZP_03020444.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227813041|ref|YP_002813050.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CDC 684]
 gi|254686762|ref|ZP_05150620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254724838|ref|ZP_05186621.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A1055]
 gi|254739015|ref|ZP_05196717.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254744602|ref|ZP_05202281.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Kruger B]
 gi|254756141|ref|ZP_05208170.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Vollum]
 gi|254761959|ref|ZP_05213808.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Australia 94]
 gi|49177314|gb|AAT52690.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Sterne]
 gi|164713557|gb|EDR19081.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0488]
 gi|167510754|gb|EDR86147.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0193]
 gi|167529818|gb|EDR92566.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0442]
 gi|170127893|gb|EDS96764.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0389]
 gi|170667089|gb|EDT17851.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0465]
 gi|172080664|gb|EDT65747.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0174]
 gi|190561318|gb|EDV15290.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227005247|gb|ACP14990.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CDC 684]
          Length = 263

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++    L   Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEELFKGQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 243 FNGTNRKI---------ISDHFGVEVQVD 262


>gi|258546221|ref|ZP_05706455.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826]
 gi|258518646|gb|EEV87505.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826]
          Length = 253

 Score = 73.4 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 81/302 (26%), Gaps = 74/302 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + SWN+N+L+                     + QY K    DI+ LQE+   +A    
Sbjct: 1   MNITSWNVNSLN----------------VRLPHVLQYLKETAPDILGLQELKQTDAA--- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  I  +      +         +  +A+  +          + G  D  +RA   
Sbjct: 42  -------IDRTALAAAGYHLESHGQKTYNGVALLAREALTDVVRG-IPGYADEQARA--- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  N   + VL++++ +   +   + TY             +  +I   K    
Sbjct: 91  ------IAANVGDVRVLNLYVPNGKAVGDEKYTYK------LHWLDAVTRYIDDLKREHP 138

Query: 204 PFVIAGDFNRKINYLGNND---DFWKTI-----------DPNDSLIRFPKEKDSRCNANK 249
             VI GD+N     L  +D      + +                     +          
Sbjct: 139 KLVIIGDYNIAPADLDVHDPDKWRDQILCSAPERQALANLLALGFKDAYRTLHPDTQQFS 198

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ++          ID  +              +      D      +R SDH P  +
Sbjct: 199 WWDYRMGGLRRNIGLRIDLTLTSDAL---------TLADAGIDTAPRHWERPSDHAPAWV 249

Query: 301 DY 302
             
Sbjct: 250 KI 251


>gi|183602482|ref|ZP_02963848.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|183218401|gb|EDT89046.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp.
           lactis HN019]
          Length = 284

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 42/275 (15%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-----NNDIHTA 113
            +AK    ++  +QE  +   +           +    ++ +  +  +            
Sbjct: 21  HWAKAHTPNVWCMQETRAPQEIIADIYGELAADYVHAGKIASPEELHTLVDVCRIKGRAG 80

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + +      +  +       +D  S    R     +    G  I V+ +++ +   +D  
Sbjct: 81  VGMISDMPVLETRVGLPGLEEDVDS---GRWIEADVRTEQGYVITVVCVYVHAGGLVDDP 137

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------Y 217
           +         L    + ++    +        V+ GDFN   N                +
Sbjct: 138 KEAQK--YRFLDTMTERMQQLQDEAASGGRQAVVCGDFNIAHNPIDLKNPKSNENNNGYF 195

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYK 268
                   K ID  D +                   +           +DY        +
Sbjct: 196 PRERAYMDKWIDQMDYVDVMRDLAGDIQGPYTWWSQRGRAFDNDSGWRLDYQFATPELAQ 255

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +  D   S   R SDH P++I YD
Sbjct: 256 QARG-------FVVDRASSYDSRWSDHAPLTISYD 283


>gi|119899953|ref|YP_935166.1| exodeoxyribonuclease III [Azoarcus sp. BH72]
 gi|119672366|emb|CAL96280.1| Exodeoxyribonuclease III [Azoarcus sp. BH72]
          Length = 260

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 81/306 (26%), Gaps = 76/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +                         +    +AD+V +QE+ +      +
Sbjct: 2   LRIISANLNGIRSATTKGF---------------LDWLPAQNADVVCVQELKAQAG--DL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y         K  S   I++  A              + G   +   A  R
Sbjct: 45  TDAMRAPAGYQGWFHYAEKKGYSGVGIYSRKAP----------DRVVEGLGIADIDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ +   + V+ ++L S    +  +            +   L+           
Sbjct: 95  Y-----LQADFGALSVISLYLPSGSSSEERQQAKFSFMERFMPRLAELRR-------CGQ 142

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPK-EKDSRCN 246
             VI GD+N                                D +  +  +     ++  +
Sbjct: 143 EVVICGDWNIAHREIDLKNWKSNQKNSGFLPEERAWIGTLFDTHGWVDVYRALYPEATGD 202

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           +     N+           IDY +            S             + +R SDH P
Sbjct: 203 SYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARAGSV-----------YKAQRFSDHAP 251

Query: 298 ISIDYD 303
           + +DYD
Sbjct: 252 LVVDYD 257


>gi|169769326|ref|XP_001819133.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           oryzae RIB40]
 gi|83766991|dbj|BAE57131.1| unnamed protein product [Aspergillus oryzae]
          Length = 305

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 89/300 (29%), Gaps = 31/300 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVA 81
            +RL++ NI T+         K    R       L  +    + + I+ LQE+       
Sbjct: 10  PIRLITHNIRTIPWFT-FPPEKPWNIRRNHIVNQL-DFNTTHNPEAIICLQEVMHRQLTD 67

Query: 82  KVFPKNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---- 132
            +   NT     S       + +   +       ++ I  R +   V   +   L     
Sbjct: 68  ILTGLNTAPDSESIEGEEIWKHVGCGRDGGQKGEYSPIIYRARVWEVEWATTRWLSETPD 127

Query: 133 -AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                +  A  R    +++   G    VL ++       D  +     S  L+ +  + +
Sbjct: 128 TPSRGWDAAYRRIVTYVVLRHRGSGRKVLAMNTHL---DDRGKVARFESAKLILEWMEEV 184

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--NK 249
                +  +S+   V+ GDFN        N+D +  +     +         R     N 
Sbjct: 185 LK--KKDSDSVEGVVLCGDFN---TNSRENNDAFGVLTAGAMVHTRDCVDGERRYGNVNS 239

Query: 250 NLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        +DY ++        +  +        +     G   SDH  ++ D +
Sbjct: 240 WTGFNDTPIDDALLDYVLVGP-LKSGHVPWNIRTYGILTNR-FDDGIFNSDHRAVAADVE 297


>gi|325278018|ref|ZP_08143544.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51]
 gi|324096847|gb|EGB95167.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51]
          Length = 261

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 78/299 (26%), Gaps = 55/299 (18%)

Query: 13  LVPCTASVAQKVR---LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
            +P +   +  VR   +++ N++                        LR+  +   AD+V
Sbjct: 7   ALPRSTDQSTAVRRLNVLTLNVHKGFTFFNRRF----------ILPELREAVRATGADLV 56

Query: 70  FLQEMG---SYNAVAKVFPKNTWCIFY---STERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           FLQE+      +A+      +T    +   S      + +           A+  K    
Sbjct: 57  FLQEVHGSHQQHALRHPAWPDTPQYEFLADSMWPQFAYGRNAVYPQGDHGNALLSKFPI- 115

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                       S      R  +   +E+ G    V  I +                 + 
Sbjct: 116 ----QRFNNLDVSVQGKEQRGLLHCQLEVPGHD-QVHAICVHLGLR-----------EAH 159

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
              Q Q     +        P ++AGDFN               +     +  F +   +
Sbjct: 160 RQSQIQL-LLDLLASLPPQAPVIVAGDFNDW-------RLKADAVLGEHLVEAFGERFGT 211

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +       + +D   +           S                 LSDH P++ + 
Sbjct: 212 PARSFPARLPLLRLDRIYLRNAMPSAAQVLS-----------NYPWSHLSDHAPLAAEI 259


>gi|229917706|ref|YP_002886352.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
 gi|229469135|gb|ACQ70907.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
          Length = 263

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 73/288 (25%), Gaps = 46/288 (15%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           NI TL+    +        R       + +   + + D + LQE+  +     ++     
Sbjct: 2   NILTLNCHAWL------EDRQQEKIDAIVERIASEEYDFIALQEVNQHKEAPLIYGNIRE 55

Query: 90  CIFYS-----------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             F                +         +     +A+  +   +  +S+ +    D  +
Sbjct: 56  NNFAHVLVERLKELDLHYHMTWDFAHYGYDIYEEGVAILSRTPFLSTESFFVSKTTDPDN 115

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +R+ V+ ++E       V   HL            +      +  Q   L   +   
Sbjct: 116 YK-SRKIVKAVIEGPETPTTVYSCHLGW----------WHDEEEPVKHQLDELLRRVE-- 162

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--- 255
                  ++ GDFN      G   D+       D      + +       K         
Sbjct: 163 --HDDHALLLGDFNNDAFIRGEGYDYLMENGLQDLFHLATEREGDATVQGKIAGWDENKK 220

Query: 256 --PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              ID  +                  +        G  +SDH  +   
Sbjct: 221 SLRIDLML---------TNAPIHVSRHAVVFDGENGPVVSDHAGVEAT 259


>gi|313206096|ref|YP_004045273.1| exodeoxyribonuclease iii xth [Riemerella anatipestifer DSM 15868]
 gi|312445412|gb|ADQ81767.1| exodeoxyribonuclease III Xth [Riemerella anatipestifer DSM 15868]
 gi|315023722|gb|EFT36725.1| Exodeoxyribonuclease III [Riemerella anatipestifer RA-YM]
 gi|325336460|gb|ADZ12734.1| Exonuclease III [Riemerella anatipestifer RA-GD]
          Length = 253

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 85/306 (27%), Gaps = 81/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                      L  +  +   D++  QE  +      +
Sbjct: 1   MKIISYNVNGIRAAFNKD---------------LIGWLGHAAPDVICFQESKAQKDQIDI 45

Query: 84  --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F K  +  ++ +     +S       I                 +   G         
Sbjct: 46  ASFEKEGYHTYWFSAEKKGYSGVGIATKIQP--------------KHVEYGCDMELYDKE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     ++ ++ +   V+ +++ S   +D L+      C       + L+  I      
Sbjct: 92  GR-----VIRVDFEDFSVISVYVPSATNIDRLDFKMQ-FCYDFLAYIKELRKTI------ 139

Query: 202 LVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRC 245
               +I+GDFN     +  +D                   + +     +  F        
Sbjct: 140 -PNLIISGDFNICHQAIDIHDPVRLKNVSGFLPIEREWMTEFLKECGLIDSFRYFNTEP- 197

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           N       +           +DY  +  +    L +       Y+           SDHC
Sbjct: 198 NQYSWWSYRQNARANNKGWRLDYHFVSDSLESRLSRGLILSDAYH-----------SDHC 246

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 247 PVLVEL 252


>gi|146320230|ref|YP_001199941.1| metal-dependent hydrolase [Streptococcus suis 98HAH33]
 gi|145691036|gb|ABP91541.1| Metal-dependent hydrolase [Streptococcus suis 98HAH33]
          Length = 286

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 81/301 (26%), Gaps = 54/301 (17%)

Query: 21  AQKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---S 76
              ++L++ N++  L             +R      +L Q       D++ LQE+    +
Sbjct: 21  GGAMKLLTINVHAWL------------EERQDEKLDVLAQTIAEKAYDVIALQEVNQLIT 68

Query: 77  YNAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            + V K    + + +                   +     +     IA   K        
Sbjct: 69  ADLVTKDLKADNYGLILLEKLRTLGQFDYSYYWSNSHIGYDKYEEGIAFLTKLPVYEVDQ 128

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           +       S     +R+ + L V    + I +   H+      +  +     +    +  
Sbjct: 129 F-YCSQNKSIDSILSRKIMGLTVFYQDQLIDLYSCHINLPGSEEEDQLDNIRTIVERT-- 185

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-- 245
                        +    ++ GDFN          +    +   DS     ++       
Sbjct: 186 ------------GNRRFKILMGDFNTDAFSDREAYEAITELGLYDSYNLAMEKDQGITVE 233

Query: 246 ---NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +       +  +DY  ++Q          F+               +SDH  + ++ 
Sbjct: 234 KAIDGWAGHSQEKRLDYIFLNQKKEVLSSLVIFNGENRPI---------ISDHFGVEVEI 284

Query: 303 D 303
           +
Sbjct: 285 N 285


>gi|30260540|ref|NP_842917.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Ames]
 gi|47525644|ref|YP_016993.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|229601471|ref|YP_002864988.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0248]
 gi|30253908|gb|AAP24403.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Ames]
 gi|47500792|gb|AAT29468.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|229265879|gb|ACQ47516.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0248]
          Length = 263

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D+V LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVVALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++    L   Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEELFKGQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 243 FNGTNRKI---------ISDHFGVEVQVD 262


>gi|148230446|ref|NP_001085108.1| endonuclease/exonuclease/phosphatase family domain-containing
           protein 1 [Xenopus laevis]
 gi|82184764|sp|Q6IND4|EEPD1_XENLA RecName: Full=Endonuclease/exonuclease/phosphatase family
           domain-containing protein 1
 gi|47939840|gb|AAH72349.1| MGC83496 protein [Xenopus laevis]
          Length = 556

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/296 (9%), Positives = 81/296 (27%), Gaps = 39/296 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+   S  +  +              ++          ++ +QE+   +A+ K+
Sbjct: 254 LRVATWNLQNCSLDKANNPGV---------REVVCMTLLENSIKLLAVQELSDKDALEKL 304

Query: 84  FPKNTWCIFYSTERLINHSKRD------------SNNDIHTAIAVR-KKNVRVLQQSYPL 130
             +       +  +                    S  + +          + +   +   
Sbjct: 305 CTELNQPSLPNIRKWKGMRGSWKCIISEKSLCGPSEKEEYFGFLWDVSAGIELKNVNLSE 364

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +    +      ++    + +++IHL            +       +   Q 
Sbjct: 365 NMQTNGNGKHMYLQPYIAHFKVGTCDLTLVNIHL---SPPTVETVKHQNDTYKSAVFGQA 421

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L++ +     +    +I G F+   +        +  +         P    +  +    
Sbjct: 422 LQETLK----NERDVIILGCFSLPADSSE-----FDVLRKEKFHCLLPLNTFTNISTKNP 472

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
             NK  +D   + ++  K     S           I          S+HCP+  ++
Sbjct: 473 QGNKS-LDNIWISKSLKKIFTGYSLVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 527


>gi|288817830|ref|YP_003432177.1| exodeoxyribonuclease III [Hydrogenobacter thermophilus TK-6]
 gi|288787229|dbj|BAI68976.1| exodeoxyribonuclease III [Hydrogenobacter thermophilus TK-6]
 gi|308751428|gb|ADO44911.1| exodeoxyribonuclease III Xth [Hydrogenobacter thermophilus TK-6]
          Length = 268

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 80/302 (26%), Gaps = 73/302 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++ S+N+N+++                    L+  + +    DI+ LQE+ + +    
Sbjct: 10  SFKIASYNVNSINT----------------RKELVLSWLERDPVDILCLQELKTTDE--- 50

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                           + +         +  +A+  + +          G  D+      
Sbjct: 51  -------NFPKEDFMKMGYECYTHGQKTYNGVAICSRFLLEEV----FKGMGDATYDQEK 99

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     ++    K +W+++ +                         +    +IT+     
Sbjct: 100 R-----VIGGRFKDVWIINAYFPHGES------RGGRKFFWKLGFYEKFLRFITESFSPN 148

Query: 203 VPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              V+ GD N  +                      D   K I      +   +       
Sbjct: 149 DKIVLVGDMNVAMEDIDVYDPVLLKDTIGTMKEERDALKKLIS--WGFVDAFRYLYPEKR 206

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            + IDY ++ +    +L      ++  +    K R  + SDH P
Sbjct: 207 QFTWWDYIGGMVWKDQGMRIDYILITKPLLAYL-----RDVYVDMWPRKRRNPKPSDHAP 261

Query: 298 IS 299
           I 
Sbjct: 262 IV 263


>gi|301792507|ref|XP_002931219.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like
           [Ailuropoda melanoleuca]
 gi|281349729|gb|EFB25313.1| hypothetical protein PANDA_022064 [Ailuropoda melanoleuca]
          Length = 516

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/330 (12%), Positives = 82/330 (24%), Gaps = 69/330 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +       +++            + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRSPLQGMVYEEPSNCAAM---AMGRILDKLDADIVCLQETKVTRDVLTE 58

Query: 82  KVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R    +S   +                  +          G  D 
Sbjct: 59  PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSVTPMAAEEGLSGLLATHNGDVGCYGNMDE 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           F++   R                  E   K + +++++                S  +  
Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADAGKPE----RLSFKMRF 174

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDPN 231
            +   ++        +    +I GD N                             +   
Sbjct: 175 YRLLQIRA--EALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDGLLSNL 232

Query: 232 D---------SLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQE 273
                      +  +   +  +  A                  +DY + D+         
Sbjct: 233 GCQAGSHVRPFIDSYRCFQPKQEGAFTCWSAVSGARHLNYGSRLDYVLGDRTL------- 285

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               I   +D  +      SDHCP+     
Sbjct: 286 ---VIDTFQDSFRLPEVMGSDHCPVGAVLS 312


>gi|217969119|ref|YP_002354353.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T]
 gi|217506446|gb|ACK53457.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T]
          Length = 260

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 84/307 (27%), Gaps = 76/307 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +                 +    L  +     AD + +QE+ + +A   +
Sbjct: 2   LRIITLNLNGIRS---------------ACTKGLLDWLPAQQADFLCVQELKAQDA--DL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+                   +    ++ + +  ++          + A D+  R    
Sbjct: 45  RPEMRAPAGMQGW------FHAAEKKGYSGVGIYSRHAPDRVVEGLGIPAIDAEGRF--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++++  K+ V+ ++L S       +                L         S  
Sbjct: 96  ------LQLDFGKLSVVSLYLPSGSSSAERQQVKFDFMDRFLPHMDQLFQ-------SGQ 142

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+ GD+N                             +  D    +  + +       A
Sbjct: 143 EVVVCGDWNIAHREADLKNWKSNQKNSGFLPEERAWLGRLFDEQGWIDVYRRLHPEATEA 202

Query: 248 -NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           +DY V                          + +R SDH P
Sbjct: 203 CYTWWSNRGQAWAKNVGWRLDYQVATPGLAASAQAAEV-----------YKAQRFSDHAP 251

Query: 298 ISIDYDF 304
           +++DYD+
Sbjct: 252 LTVDYDW 258


>gi|238501800|ref|XP_002382134.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|220692371|gb|EED48718.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 304

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 90/300 (30%), Gaps = 32/300 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVA 81
            +RL++ NI T+         K    R       L  +    + + I+ LQE+       
Sbjct: 10  PIRLITHNIRTIPWFT-FPPEKPWNIRRNHIVNQL-DFNTTHNPEAIICLQEVMHRQLTD 67

Query: 82  KVFPKNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---- 132
            +   NT     S       + +   +       ++ I  R +   V   +   L     
Sbjct: 68  ILTGLNTAPDSESIEGEEIWKHVGCGRDGGQKGEYSPIIYRARVWEVEWATTRWLSETPD 127

Query: 133 -AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                +  A  R    +++   G    VL ++       D  +     S  L+ +  + +
Sbjct: 128 TPSRGWDAAYRRIVTYVVLRHRGSGRKVLAMNTHL---DDRGKVARFESAKLILEWMEEV 184

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--NK 249
              + +  +S+   V+ GDFN        N+D +  +     +         R     N 
Sbjct: 185 ---LKKDSDSVEGVVLCGDFN---TNSRENNDAFGVLTAGAMVHTRDCVDGERRYGNVNS 238

Query: 250 NLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        +DY ++        +  +        +     G   SDH  ++ D +
Sbjct: 239 WTGFNDTPIDDALLDYVLVGP-LKSGHVPWNIRTYGILTNR-FDDGIFNSDHRAVAADVE 296


>gi|307705505|ref|ZP_07642359.1| exodeoxyribonuclease III [Streptococcus mitis SK597]
 gi|307620963|gb|EFO00046.1| exodeoxyribonuclease III [Streptococcus mitis SK597]
          Length = 275

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEILEELFPGYANTWRSSQEPARKGYAGTMFLYKKELSPTVTFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDKFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAEL--------DKQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDAPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRIADNVTKSDMIDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|281183305|ref|NP_001162517.1| deoxyribonuclease-1-like 1 [Papio anubis]
 gi|160213460|gb|ABX10988.1| deoxyribonuclease I-like 1, isoform 1 (predicted) [Papio anubis]
          Length = 302

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILVN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F ++      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLRELNRFDASGPYSTLSSPQLGRSTYVETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181
                     D       R        +       + ++ +H         L   Y    
Sbjct: 112 SSYVY-----DDEDDVFAREPFVAQFSLPSDVLPSLVLVPLHTTPKAVEKELNALYDVFL 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +                      ++ GDFN     L         +           + 
Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +              I   +  +     L   +  +        +     +SDH P+ ++
Sbjct: 214 EDTTVRASTHCAYDRI--VLHGERCRSLLHTAAAFDFPTTFQLTEEEALNISDHYPVEVE 271

Query: 302 Y 302
            
Sbjct: 272 L 272


>gi|324515683|gb|ADY46281.1| Recombination repair protein 1 [Ascaris suum]
          Length = 378

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/310 (10%), Positives = 78/310 (25%), Gaps = 76/310 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  + + +++WN+  L                        ++  +  ADIV LQE     
Sbjct: 119 SANRPLTIITWNVAGLRALVKKDAC---------------RFITSDKADIVLLQETKCAE 163

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                         +  +        +     H  + +  K   +  Q+      ++   
Sbjct: 164 V----------PTGFPVKGFKAFVGENPGKTGHAGVILLSKQKPIKVQTKLENVPEELG- 212

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  V         K ++++ ++ +                      + L       
Sbjct: 213 -VEGRLIVA-----EYDKFYLINAYVPNSGRGLVNLAKRKIWDDFFIDYIKQL------- 259

Query: 199 KESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKD 242
            ++    + AGD N                            +  +     +  +     
Sbjct: 260 -DASKAVIYAGDLNVAHEEIDLANPKTNRNKTAGFTDQERGDFTRLLQAGFVDVYRSLHP 318

Query: 243 SRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            +  A                  +DYFV+ +     +++   +  +             S
Sbjct: 319 DKTGAYTFWSTMHNARATNIGWRLDYFVVSERLMDKVVKCEINSRV-----------MGS 367

Query: 294 DHCPISIDYD 303
           DHCP+++  +
Sbjct: 368 DHCPLTLQIN 377


>gi|228913117|ref|ZP_04076756.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228846522|gb|EEM91535.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 263

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262


>gi|269861372|ref|XP_002650396.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Enterocytozoon bieneusi H348]
 gi|263405653|sp|B7XK66|CCR4_ENTBH RecName: Full=Probable glucose-repressible alcohol dehydrogenase
           transcriptional effector homolog; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|220066167|gb|EED43664.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Enterocytozoon bieneusi H348]
          Length = 481

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 80/316 (25%), Gaps = 39/316 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SY 77
           +     ++NI        ++   + V        +L Q     + DI+ LQE+     + 
Sbjct: 167 ETYSFGTFNILCSLYASNLTYAPSWVINLECRKDILMQTFIAYNLDILCLQEVDINVFNT 226

Query: 78  NAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKN----VRVL 124
               ++  K  +             + +    H            +  +         + 
Sbjct: 227 FYKEQLAQKLDYDGVILPKKSFDKVTDQPKKFHGIVTFWKKNKFKLIEQVSIDFFQKIIN 286

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            + +  L    +         +  + E     I ++  ++  +   +  +     +   L
Sbjct: 287 DKRFKYLSDIHTRIFQKTNVGLITIFETCNTNIIIIVANVHLYWNPEFNDIKILQTIIYL 346

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------- 237
             + ++LK+     K      V+ GDFN   N         + +  N             
Sbjct: 347 E-EIEFLKE-----KYKHAHIVLQGDFNSLQNSHVYQYIINRKLPTNIFDPWDYGSLNNG 400

Query: 238 ---------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                      +       N     K  IDY    +      I     +           
Sbjct: 401 VTHSLTLRNAYDGHDITFTNFTPSFKAVIDYIFYSKYLNLISIISPIEDEYTKTTIGLPN 460

Query: 289 GKRLSDHCPISIDYDF 304
               SDH  I   + F
Sbjct: 461 IHFPSDHILIGAKFQF 476


>gi|126433598|ref|YP_001069289.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. JLS]
 gi|126233398|gb|ABN96798.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. JLS]
          Length = 255

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 74/307 (24%), Gaps = 81/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +R+ ++NI                     D   L Q  + LDADIV LQE+  +      
Sbjct: 1   MRVATFNILHGRSVHDG----------EVDVDRLAQSIRELDADIVALQEVDLHQPRSGT 50

Query: 79  -----AVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                  A+     +     +         +  + R+        IA+  +      Q  
Sbjct: 51  TDLTAVAAEAMHAVSHRFVAAIAGTPGATWMAATGREQPGTAAYGIALLSRFPAETWQVV 110

Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            L      F                 R A+    +     + V + HL      +     
Sbjct: 111 RLPRIPVPFPMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSFVPGWN----- 165

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                     Q + L   +   K    P ++ GD N                        
Sbjct: 166 --------RVQMRHLVRDLRGFKG---PRMLLGDLNMSPP---------------TPARW 199

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                               +D+ +   +    + + S   +             +SDH 
Sbjct: 200 ARMRSLGEGLTFPAHAPDRQLDHVL-TDDPRLRVEKCSAVSLP------------ISDHR 246

Query: 297 PISIDYD 303
            + +D  
Sbjct: 247 ALVVDIS 253


>gi|73985329|ref|XP_541830.2| PREDICTED: similar to 2-phosphodiesterase [Canis familiaris]
          Length = 616

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 77/320 (24%), Gaps = 45/320 (14%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+N+          S                    L+++     +AD++ LQE+  
Sbjct: 302 IRTVSYNLLADTYAQTEFSRSVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 361

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-------- 128
                 + P           R+  H    +     T  ++  ++     ++         
Sbjct: 362 NVFTDSLVPALEAFGLEGVFRIKQHEGLATFYR-KTKFSLLSQHDISFHEALESDPLHKE 420

Query: 129 ---PLLGAKDSFSRAGNRRAVE---LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               L+    +  R   R +V    +L         +   +   +               
Sbjct: 421 LLEKLVVYPSAQERVLQRSSVLQVSVLQSTKDSSKRLCVANTHLYWHPKGGYIRLIQMAV 480

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDP 230
            L          ++      +P +  GDFN   +               + D      + 
Sbjct: 481 AL-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVVNGSIPEDHEDWASNGEEE 535

Query: 231 NDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDD 284
             ++      K           N        +DY  +D        +    S        
Sbjct: 536 RCNMSLSHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQ 595

Query: 285 IKSRGKRLSDHCPISIDYDF 304
                   SDH  +  D  +
Sbjct: 596 ALPSVSHPSDHIALVCDLKW 615


>gi|193213004|ref|YP_001998957.1| endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB
           8327]
 gi|193086481|gb|ACF11757.1| Endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB
           8327]
          Length = 354

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/354 (10%), Positives = 80/354 (22%), Gaps = 79/354 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTS---------DYTLLRQYAKNLD----ADIVF 70
           + +  WN+  L +    ++  +                    +    K +      D++ 
Sbjct: 4   INVAFWNVQNLFDTTASTIATDLDFTPEEGWTEEVFNIKVDNIANIIKQMHGGAGPDLLG 63

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           L E+ +   V  +  K     +          +    + I++A         V      L
Sbjct: 64  LCEVENKEVVNYLLEKIGRNDYRLAHVEAPDIRGIDCSLIYSAKVFND--PPVEDMKGHL 121

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-- 188
           +  +           V L ++  G ++ V   H  S          +  + +    Q   
Sbjct: 122 VNFRFPTRDIFQ---VRLTLKATGAELNVFVNHWPSRRQGQYQSEPHRITVAERCGQLVN 178

Query: 189 --------------QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226
                             +            ++ GDFN         D            
Sbjct: 179 DVLKLSRQEYAEVHDAAGELEKLNARWNRNVLLMGDFNDDPFCRSITDYLLASKDLDKVE 238

Query: 227 ----------------------TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
                                  +      +    +  +   ++ +       D F++ +
Sbjct: 239 EVVKASSNHEIPAISTYIKRQPALFNLSWPLLAQPDTGTIFFSSDSANTMNLFDQFMVSR 298

Query: 265 NA-----YKFLIQESFSEILYNE----------DDIKSRGKRLSDHCPISIDYD 303
                        ES       E             K   K  SDH PI +  D
Sbjct: 299 GLCYGESGLKTRPESMRIFTTPEMAPGNKQRPKAFDKKTKKGFSDHFPIEMTID 352


>gi|42527240|ref|NP_972338.1| exodeoxyribonuclease III [Treponema denticola ATCC 35405]
 gi|41817664|gb|AAS12249.1| exodeoxyribonuclease III [Treponema denticola ATCC 35405]
          Length = 256

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 80/304 (26%), Gaps = 84/304 (27%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------SYN 78
            ++SWN+N +   E                     +    + D++ +QE        S  
Sbjct: 3   SIISWNVNGIRAVEKKGF---------------LDWLNTENPDVLCVQETKAAKAQLSKE 47

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                 P   +  ++++ +   +          +  A+  K   +  ++  L    D   
Sbjct: 48  LTEPDLPNGKYFAYWASAKKAGY----------SGTAIFTKKEPLQVRTMGLKEFDDEGR 97

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                     ++  +  K+ ++  +  +     +  +     C         + ++    
Sbjct: 98  ----------VLVADFDKVSIISAYFPNSQDGGARLDYKLDFC-------AAILEFCDSV 140

Query: 199 KESLVPFVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           +E     ++ GDFN                   YL     +      +     F      
Sbjct: 141 QEEGNNVILCGDFNIAHKPIDLANPKSNEKNPGYLPEERAWMDEFTSSGYTDTFRHFCKE 200

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           +DY  ++ +    + +    +           G   SD
Sbjct: 201 PAK-YTWWSYRFRAREKNIGWRLDYHCVNDSFLAKIKESIILD-----------GVMGSD 248

Query: 295 HCPI 298
           HCP+
Sbjct: 249 HCPV 252


>gi|229194746|ref|ZP_04321537.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
 gi|228588757|gb|EEK46784.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
          Length = 263

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 77/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTAYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVNRLMEHVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++      +D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQKGLHDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNI---------ISDHFGVEVQVD 262


>gi|315023036|gb|EFT36049.1| hypothetical protein RAYM_01957 [Riemerella anatipestifer RA-YM]
 gi|325336276|gb|ADZ12550.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer
           RA-GD]
          Length = 397

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 76/296 (25%), Gaps = 35/296 (11%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
           ++    S++   +       + L          +V L E+ +   V  +  +     F  
Sbjct: 106 AKNYNTSIYNQKLINAARVISELGASVTKTAPVVVGLLEVENRQVVEDLVKQPALKKFDY 165

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEIN 153
                N         I  A+  +K+       +   L   +   R    R  + +   ++
Sbjct: 166 GVIHYNS---YDYRGIDVALIYQKRRFSPTYSTKKELKIYNEEGRREYTRDLLVVSGYLD 222

Query: 154 GKKIWVLDIHLKSFCFLDSLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           G+K+     H  S    +++     + +  LL  Q   ++       ++    +  GDFN
Sbjct: 223 GEKVAFFVNHWPSRRGGEAVSLPKRNAAAQLLRAQMDSVRAL-----DANTKLIAMGDFN 277

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEK------DSRCNANKNLRNKIPIDYFVMDQNA 266
                    +         +    +P              +          D  ++ +N 
Sbjct: 278 DDPISSSFKNHLKAVGSVKELSPEYPYINLMYPLYKKGVASLAYRDAPNLFDQIIVSENL 337

Query: 267 YKFLIQE-------------------SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                     SF    +   +        SDH P+     
Sbjct: 338 VNPKDTSYSVFRTEVYAPAYLINKEGSFKGYPFRSWNGDKFTGGYSDHFPVFTILS 393


>gi|195996511|ref|XP_002108124.1| hypothetical protein TRIADDRAFT_20232 [Trichoplax adhaerens]
 gi|190588900|gb|EDV28922.1| hypothetical protein TRIADDRAFT_20232 [Trichoplax adhaerens]
          Length = 552

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 82/327 (25%), Gaps = 53/327 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEG-------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +     R+VS+N+   +                           L+ +     +ADI+ L
Sbjct: 233 TQPDSFRIVSYNVLADTYSSQEHTQKVLFPYCPPYALSIDYRKLLITRELYGYNADIICL 292

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE        K      +  F              NN    A         ++      +
Sbjct: 293 QECD------KDIFNQFYAPFMKGLGYDGIQDSKINNREGEATFYHMDRFNMIDHHCQSI 346

Query: 132 GA--------------KDSFSRAGNRRAVELLVEINGKK---IWVLDIHLKSFCFLDSLE 174
           G                    R  NR ++  +V +  K+   I ++ ++   +    +  
Sbjct: 347 GNTLKNDEIFEQICKCPTLKYRLLNRNSIVQIVTLQPKELENIRLVVVNTHFYFRPQASH 406

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                  S+L      ++ +  +   + V  +  GDFN              ++  ND +
Sbjct: 407 IRILQGYSMLKC----VEKYCEKFIGNDVRVLYCGDFNSHPRTALVKLMTTGSVQSNDPV 462

Query: 235 IRFPK------------------EKDSRCNANKNLRNKIPIDYFVMDQNAYK-FLIQESF 275
                                          N        +DY       ++   +  S 
Sbjct: 463 WHEGGEEEFCENISLRNDKKCVSFTGYPQFTNFVNGFVECLDYIFGQPEHFQVEQVFPSM 522

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
           +E +             SDH  I  D 
Sbjct: 523 TEEVAAAYTALPSVVSPSDHVAIGCDL 549


>gi|170077908|ref|YP_001734546.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7002]
 gi|169885577|gb|ACA99290.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7002]
          Length = 224

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/238 (10%), Positives = 72/238 (30%), Gaps = 43/238 (18%)

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSRAGNRRAVE 147
                    + +    S    +  +A+  +     V+    P++GA  +      +R + 
Sbjct: 5   DFPRQPFEALGYHTSISGQKSYNGVALLSREPLQDVIIGFTPVVGAAIAQDFDAQKRVIS 64

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
            ++      + V+++++ +   + S +  Y           + LK ++ +  +     ++
Sbjct: 65  GVI----GDVRVVNLYVPNGSAVGSEKYDYK------LGWFEVLKAYLKELCKDDREILM 114

Query: 208 AGDFNRKINYLGNN--------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            GDFN  +                     +    I        F ++ +   +       
Sbjct: 115 CGDFNIALEDRDIYMPKKPDHIMASPAERETLTAILDFGFQDVF-RKFNQEADQFSWWDY 173

Query: 254 K---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +           ID+  + +  Y    +          D      ++ SDH P+ ++ 
Sbjct: 174 RTRGFSRNRGWRIDHIYLTEKLYGQAKRCWI-------DREPRGWEKPSDHTPVIVEL 224


>gi|332672018|ref|YP_004455026.1| exodeoxyribonuclease III Xth [Cellulomonas fimi ATCC 484]
 gi|332341056|gb|AEE47639.1| exodeoxyribonuclease III Xth [Cellulomonas fimi ATCC 484]
          Length = 263

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 70/304 (23%), Gaps = 68/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WNIN                   +       + +    D++ LQE    +     
Sbjct: 1   MRLATWNIN----------------SIRARTERTVAFLERSGVDVLALQETKCTDE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          + +    S       +AV  +      +    +G     +     
Sbjct: 41  ------QFPREPFEALGYEVATSGFSQWNGVAVLSRVGLQDVE----VGFPGMPTWGEPA 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KES 201
            A    +      + V  +++ +   +D     Y             L+D        + 
Sbjct: 91  AAEARALGATCGGVRVWSLYVPNGREVDDPHYVYKLD------WLARLRDAAEGWLVADP 144

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKEKDSRCNA 247
            +   + GD+N         D  W                           +E     + 
Sbjct: 145 QLAAALVGDWNIAPLDTDVWDPAWFAGRTHVTPAERAAFTAIAEAGWTEVSREHLPAEHT 204

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + ID           +               + +GK  SDH P+
Sbjct: 205 YTYWDYQRLRFPRNEGMRIDLTYATPALAARVRGAQIV-------RDERKGKAPSDHVPV 257

Query: 299 SIDY 302
            +D 
Sbjct: 258 VLDI 261


>gi|238502459|ref|XP_002382463.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           flavus NRRL3357]
 gi|220691273|gb|EED47621.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           flavus NRRL3357]
          Length = 323

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 89/300 (29%), Gaps = 29/300 (9%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78
            +R+++ NI   + +      K   +R       L    +N DA  + LQE+        
Sbjct: 8   PLRILTNNIRY-ATKSPFKGEKPWEERRQPLLNQLLYNTRNQDA-FICLQEVLHDQLIDI 65

Query: 79  ---------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                    A +    ++ W          + +   S      ++   +    V     P
Sbjct: 66  HSGLNREHSAASAEAGEDVWAYIGVGRDDGHEAGEYSPIFYRPSVWQLRHWETVWLSETP 125

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            + +K S+  A  R     +   +  +  +L ++       D    +   +  ++ ++  
Sbjct: 126 HVPSK-SWDAASIRIVTIGVFTHHTSRQTILAMNTHL---DDQGSRSRFEAAHIILRKID 181

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-AN 248
             +    + K+ +    + GD N +      +          D+       +    +   
Sbjct: 182 EYES--GEHKDVISAVFLTGDLNSEETQEAYSVLTGNESTLIDAAKAVDPAEHYGNHLTW 239

Query: 249 KNLRN----KIPIDYFVMDQNAYKFLIQES--FSEILYNE-DDIKSRGKRLSDHCPISID 301
                       IDY ++     + L      +    Y+   +    G   SDH  + +D
Sbjct: 240 TGFGYEKEDPSRIDYVLLGPRPMEVLNNGGQPWKVEGYSVLANRFDDGVFNSDHRAVVVD 299


>gi|150863920|ref|XP_001382566.2| hypothetical protein PICST_30030 [Scheffersomyces stipitis CBS
           6054]
 gi|149385176|gb|ABN64537.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 320

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 81/280 (28%), Gaps = 30/280 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++L S NI   +     +  ++  KR       +          IV LQE+        
Sbjct: 63  TIQLYSHNIRCDTWNLKRNE-ESWAKRRARVIDCITH-CSAHLPTIVGLQEVKKNQLDDI 120

Query: 83  VFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    + W  F             +     ++               P   +K  +  A 
Sbjct: 121 IQGLGSGWDYFGVGRDDGIDKGEFAPIFYKSSEWQLVSGTTYWLSETPAKPSK-GWDAAL 179

Query: 142 NRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            R    + +  + +G++I  ++ H                + +  S+  + L        
Sbjct: 180 PRIVTSIIVKHKQSGREIKCMNTHYDH---------KGKEARNNSSRMIKELA------S 224

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +      + GDFN + +++  +      +    +            +      ++  IDY
Sbjct: 225 DHSHVCCVLGDFNAEPDHVAYSILASGNLLDTATNCFKRDGFQYTFSGFSKEESESTIDY 284

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             +               + ++  + +   +  SDH P+S
Sbjct: 285 IWVT---------LPARILKFHVMNNEFNDRNFSDHRPLS 315


>gi|313244439|emb|CBY15231.1| unnamed protein product [Oikopleura dioica]
          Length = 524

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 81/291 (27%), Gaps = 36/291 (12%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAK 82
           +  S+NI             N+          + +  K    DI  +QE+     +A  K
Sbjct: 256 KFSSFNIQVFG---------NTKYSKEPVKNQIVEILKRY--DISTIQEIRDSTESAFPK 304

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +                      S+ +    I  R    ++    +              
Sbjct: 305 LVDDINAAEDKYDWFTGERQGTTSSKEQIGFIWDRNMFSKIDGYDFNDTATSWFERPPTV 364

Query: 143 RRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                  V       +K+ ++  HLK    + +++              + +++ +  + 
Sbjct: 365 LVLERSSVNAPNFKTQKLAIISAHLKPATGVTNMDTENE------INHLKDVENDLRARH 418

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            ++   +IAGDFN   +Y    D    T+            +D    ++         D+
Sbjct: 419 PTVNDVIIAGDFNADCDY--VRDPEDLTLFSESDNSWLISFEDDTTVSSTICAY----DH 472

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------LSDHCPISIDY 302
            V+  +     +  S     Y                   +SDH P+  ++
Sbjct: 473 IVLSGDIQDNAVAGSGKVFDYQNFYDTDSIFYNGEPITALISDHFPVVFEF 523


>gi|39971297|ref|XP_367039.1| hypothetical protein MGG_10669 [Magnaporthe oryzae 70-15]
 gi|145012239|gb|EDJ96895.1| hypothetical protein MGG_10669 [Magnaporthe oryzae 70-15]
          Length = 618

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 91/333 (27%), Gaps = 61/333 (18%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
               +      V +  +N+  L           S     +    L    K    D+VFLQ
Sbjct: 290 ATLASTGSCSGVTVGIFNVENLCP---------SSAHLPAIAAQLVDALKT--PDLVFLQ 338

Query: 73  EMGSYN-------------------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           E+   +                   AV+ +        +     + N        +I  A
Sbjct: 339 EVQDDSCATNDGVVDATNTLEALRFAVSNLTDGKVDYSWVEVAPVDNQDGGQPGGNIRVA 398

Query: 114 IAVRKKNVRVLQ--------------------QSYPLLGAKDSFSRAGNRRAVELLVEIN 153
              +   + + +                    +  P      + + A  R+ +    +  
Sbjct: 399 YLYKPSVLTLAEPTNSVGTGADANEVLPGPTLKFNPGRIDPANAAWAATRKPLVAAWKAL 458

Query: 154 G--KKIWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQK--KESLVPF 205
              K  + +++H  S     SL        +   +  +QQA    ++I +   ++     
Sbjct: 459 NATKPFFTVNVHFSSKGGSSSLHGDLRTPDNSGVTKRTQQATVTGEFIAKILAEDPEAQV 518

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           + AGDFN  I         +  +     L    +       +     N   +D+  +  +
Sbjct: 519 IAAGDFNEFIPVSPLQ--TFMKVSGLLDLDEVVEMAPEERYSYLFDMNTQQLDHTFVSPS 576

Query: 266 AYKFLIQESFSEILY-NEDDIKSRGKRLSDHCP 297
                     S   + + +        +SDH P
Sbjct: 577 LSVRTPCSRRSHFQHLHVNTWSDTAGEVSDHDP 609


>gi|288924711|ref|ZP_06418648.1| endonuclease/Exonuclease/phosphatase [Prevotella buccae D17]
 gi|288338498|gb|EFC76847.1| endonuclease/Exonuclease/phosphatase [Prevotella buccae D17]
          Length = 345

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/349 (10%), Positives = 86/349 (24%), Gaps = 65/349 (18%)

Query: 6   VLALVFFLVPCTASVAQKVR---LVSWNINTLSEQEGVSLWKN-----------SVKRTT 51
           +L     L+  + S  +K     +  +N   L +    +   +              R T
Sbjct: 1   MLIAACLLISMSVSAQKKYSGYAVGFYNQENLFDTCHDAGKNDYDFLPNGSYHWDAMRYT 60

Query: 52  SDYTLLRQYAKNLDAD----------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
           +    + +   ++  D          ++ L E+ +  A+  +  +       +      H
Sbjct: 61  NKLKNMARALADMGTDKEPLRNTGCAVIGLSEVENSRALDDLVAQPQ---LRARGYKYVH 117

Query: 102 SKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
            +      +  A+        V   +  P +      S    R  + +   +  + +  +
Sbjct: 118 VEGPDRRGVDCALLYNPALFTVETVKLVPYVQELAKDSAYKTRGFLTVTGRMADEHVAFI 177

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             H  S         +      ++      L        +S     + GD N        
Sbjct: 178 VCHWPSRFSGPFYRESAGRQTRVVKDSLLRL--------DSECKIFVMGDMNDDPVNKSM 229

Query: 221 NDDFWKTID------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
            +      +             +               +    D  VM  N       + 
Sbjct: 230 TEALGAKAEISEVGEGEMYNPWYNLLAKQGIGTLSYRGSWNLFDQIVMTPNLLNPKGSKD 289

Query: 275 FSEILYNEDDIKSRGK-----------------------RLSDHCPISI 300
           FS + + ++ I  R                           SDH P+ +
Sbjct: 290 FSTLKFWQNQIVRRDYLLQQEGPYKGSPKRTTAGGVWLNGYSDHLPVVV 338


>gi|237716420|ref|ZP_04546901.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408021|ref|ZP_06084569.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           2_1_22]
 gi|229444067|gb|EEO49858.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262354829|gb|EEZ03921.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           2_1_22]
          Length = 289

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 69/286 (24%), Gaps = 46/286 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYN 78
            +R+ ++N+              +    T+    + Q  ++ D +I   +E      SY 
Sbjct: 44  SMRVATYNLQ-----------VETGTGWTNRRERVAQLIRDYDFEICGFEEASWEQRSYL 92

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                           T    N +   S      +        R      P + +     
Sbjct: 93  GTQLASDYQILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDE 152

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  V    + +  +              ++                Q L D ++ K
Sbjct: 153 TNFKRFCVWGKFKDSKTQKEFYLFETHMPLADNA-----------RKHACQMLVDAVSDK 201

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            +   P    GDFN   +         +          + +              K  ID
Sbjct: 202 AKDNTPAFCTGDFNATPDAPEIATTICQ---SGILKDAYREAAVQHGALFTFPSKKTRID 258

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP--ISIDY 302
           +  +          +  + +             LSDH P  I ++ 
Sbjct: 259 FIFV----------KHATVLSTRTIVSS-----LSDHYPMVIVVEI 289


>gi|228919300|ref|ZP_04082670.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228840407|gb|EEM85678.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 272

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIQYLAKVIQEEEYDVIALQEVSQSIQAEIVCGNKKEDNFGLLLLEELKELHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTLAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVDRLMERVD----SNKLAFLMGDFNNNARLKG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|226322570|ref|ZP_03798088.1| hypothetical protein COPCOM_00342 [Coprococcus comes ATCC 27758]
 gi|225209064|gb|EEG91418.1| hypothetical protein COPCOM_00342 [Coprococcus comes ATCC 27758]
          Length = 366

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/332 (12%), Positives = 104/332 (31%), Gaps = 69/332 (20%)

Query: 18  ASVAQKVR------LVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
            + A  +        +++N+               G S W  S +   SD     +   +
Sbjct: 52  TAAADTLTTEKEYSALTYNVGFGAYTPDFSFFMDGGKSSWAKSKESVESDIQGAGELVAS 111

Query: 64  LDADIVFLQEMGSYNAVAKVFPK--------NTWCIFYSTERLIN---HSKRDSNNDIHT 112
            D D   +QE+   +  +    +         ++   ++         +     +    +
Sbjct: 112 KDPDFALIQEVDLNSTRSYHVDEYSILKDTIPSYNTVFAQNYDSAFLFYPFTQPHGRSRS 171

Query: 113 AIAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
            +A+  K        +S+P+  +   F       ++  +   NGK++ +  +H+ ++   
Sbjct: 172 GLALFSKYPVTDSLRRSFPISTSFSKFFDLDRCYSISKVPVDNGKELVIFLLHMSAYGNS 231

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------------- 216
           D+          +   Q + L   + ++ E+    +  GDFN  +               
Sbjct: 232 DA----------IREAQIRMLSADMEKEYEAGNYVLCGGDFNHDLKASEKNAENCESWAY 281

Query: 217 ------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
                    +       +  ++    +   +++       + + + +D F+   N     
Sbjct: 282 PFPREELPEHFSFCLDNLSDSEKDALWDSARNADMEYVPGVTHTVTLDGFITSDN----- 336

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  I Y E +  + G   SDH P+ + +
Sbjct: 337 -------IEYTEYENVNTGYSYSDHDPVYMKF 361


>gi|197116747|ref|YP_002137174.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           bemidjiensis Bem]
 gi|197086107|gb|ACH37378.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           bemidjiensis Bem]
          Length = 343

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 83/293 (28%), Gaps = 56/293 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +R+++WNI                     D   L +  +    DIV  Q+     A
Sbjct: 91  SGTPLRVMTWNIKY----------------GKHDLMPLVEELERSRPDIVLFQDAVRAGA 134

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    W +      LI      S  ++       +    +L+    +  ++ S   
Sbjct: 135 GPLAGYFKDWHLLSQGRYLIASRYPLSAAEVFELPYSGRSKEYLLRCKVRVGSSEISLYD 194

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                   +  +   + +       +   ++      +  + +L   QA+ +  +++   
Sbjct: 195 --------VHFKTPRRSLNAFRKAKQGPWYIPDAVERFEDNVTLRLIQARTVAGYLS--- 243

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR------- 252
               P ++AGD N       ++    +T+        F    +       +         
Sbjct: 244 REKGPVLVAGDLN-----SPDSSLVCRTLREAGLADAFAAAGEGYGYTYGHFLLKNRIPL 298

Query: 253 ---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + + ID+ + +     +L                    R SDH P+  D+
Sbjct: 299 LRVSWMRIDHVMTN----SWLTASRCRV----------GTGRASDHRPVIADF 337


>gi|26342330|dbj|BAC34827.1| unnamed protein product [Mus musculus]
          Length = 436

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 33/314 (10%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 122 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 181

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + P           R+  H    +        +  +             L  + 
Sbjct: 182 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 241

Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189
               A N  A E +++ +   +I VL     S    C  ++    +     +   Q +  
Sbjct: 242 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVA 301

Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236
                 +++     +P +  GDFN   +               + D      +   S+  
Sbjct: 302 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 361

Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290
               K           N        +DY  +D        +    S              
Sbjct: 362 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 421

Query: 291 RLSDHCPISIDYDF 304
             SDH  +  D  +
Sbjct: 422 HPSDHIALVCDLKW 435


>gi|224045985|ref|XP_002194287.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 311

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 94/288 (32%), Gaps = 50/288 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             L++WNI+ L                      +  Y      D+VFLQE+   +     
Sbjct: 63  FSLITWNIDGLDLGN-----------VKDRARGICTYLALYSPDVVFLQEVIPPHLPLLQ 111

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                + I              + ++  TA+ ++K  V++L+              A  R
Sbjct: 112 MKAGNYTII-----------PGNIDEYFTAVMLKKSRVKLLKHDIIPFPTT-----AMKR 155

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V I+G ++ ++  HL+S                   +Q Q + + + QK+    
Sbjct: 156 NLLVVHVSISGIELCLMTSHLEST----------KNHSKERIKQLQIVFNEM-QKESEST 204

Query: 204 PFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             +  GD N + +          N  D W+ +       R+  +  S  N N   + K+ 
Sbjct: 205 TVIFGGDTNLRDSEVTKLGNLPDNIKDAWEFL-GKPQHCRYTWDTQSNTNLNAAYKCKMR 263

Query: 257 IDYFVMDQNAY-KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            D             I  S   I     +    G+  SDH  I  ++D
Sbjct: 264 FDRIYFRPAVEGGHFIPRSMDLIGL---EKLECGRFPSDHWGILCNFD 308


>gi|114587433|ref|XP_517033.2| PREDICTED: 2',5'-phosphodiesterase 12 [Pan troglodytes]
          Length = 609

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++      K           N        +DY  +D        +    S         
Sbjct: 530 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQA 589

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 590 LPSVSHPSDHIALVCDLKW 608


>gi|330996514|ref|ZP_08320396.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella
           xylaniphila YIT 11841]
 gi|329573070|gb|EGG54689.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella
           xylaniphila YIT 11841]
          Length = 362

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/293 (10%), Positives = 76/293 (25%), Gaps = 53/293 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++L+++N   L+  E  +  +            +  Y    +ADI+ LQE  +   + 
Sbjct: 98  DALKLLTYNTEFLARGEKDAEGRYP----------ILDYLVASEADIICLQEGVAPKNLK 147

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       S      +  R  ++       V  +   +           +      
Sbjct: 148 S-------EYVDSIMAKAGYHIRRLHDGKAEPQFVYSRLPVLSVHRIAYESTTNGSLAVE 200

Query: 142 NRRAVELLVEING---------------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                + ++ +N                K+I        +      L    + +  L   
Sbjct: 201 LLYGQDTVLLVNNHLESYKLTPEDKMKYKEIIKDPESGHAESNSRELVRKMAGASRLRGP 260

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           Q   + +++   K      ++ GD N        +    +          F +  +    
Sbjct: 261 QVDSVLNYVE--KSGRKAVIVCGDLNDSPISYSCHRLSSRLKSA------FRQSGNGLGL 312

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +         ID+  +            + +      D  +     SDH P+ 
Sbjct: 313 SYNQKGFYFRIDHIFVSD----------YWQTYETHVDKTAPW---SDHYPMI 352


>gi|319940717|ref|ZP_08015059.1| exodeoxyribonuclease III [Sutterella wadsworthensis 3_1_45B]
 gi|319805868|gb|EFW02635.1| exodeoxyribonuclease III [Sutterella wadsworthensis 3_1_45B]
          Length = 263

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 76/307 (24%), Gaps = 80/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
            R++++N N +        +                + + +  D++ +QE+ +  +    
Sbjct: 2   FRIITFNANGIRSASRKGFFT---------------WLRTMSPDVLCMQELKAQESDLTE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +  ++   +   +S           +  R K   V        G  +S   A 
Sbjct: 47  DLRTPLGFRGYFHCAQKKGYSG--------CGLWSRVKPFAVR------TGFGNSEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE +   + V+ ++  S    D  ++               L+        S
Sbjct: 93  GRY-----VEADFGSVIVISVYFPSGSSSDDRQSAKFRFLDAFKVHMDELRQ-------S 140

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               +I GD N                             +       +  F        
Sbjct: 141 GREVIICGDINIAHKEIDLKNWKGNLDHSGFLPEERAWLDQRFGKEGWVDVFRMLDPRPE 200

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDY +                            ++ SDH 
Sbjct: 201 R-YTWWSQRGQARAKNVGWRIDYQITTPGIAALARNTGI-----------FPDEKFSDHA 248

Query: 297 PISIDYD 303
           P+ +DYD
Sbjct: 249 PLWVDYD 255


>gi|288574340|ref|ZP_06392697.1| hypothetical protein Dpep_1612 [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570081|gb|EFC91638.1| hypothetical protein Dpep_1612 [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 284

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 85/305 (27%), Gaps = 37/305 (12%)

Query: 1   MIR--KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           M R     + +   ++   A  +  + + ++N+   S              + S+ +LL 
Sbjct: 1   MKRHGTIAVTIGIMVLLILAEPSWSLTIATFNMEYFSISG-------PRGYSRSERSLLA 53

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           Q  +   A+IV LQE+     +     ++     Y                      +R 
Sbjct: 54  QKIEASGAEIVALQEIEGDETMRTFVSEDLPGWSYGGNDTQGKQDLYFIWKSDK---IRS 110

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 +     +  K S  +   R  +E   E    +     I++              
Sbjct: 111 IKPLRPRMVEERINWKGSIHKLFQRPPLEGTFEEISTETTFSAINVHLRGLSTRGNGNRL 170

Query: 179 PSCSLLS--QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + +  +  +QAQ L   +   ++   P  I GDFN                        
Sbjct: 171 DAVAANNGIRQAQILSLGVLS-EKHDDPLFILGDFNT------------------TEPTL 211

Query: 237 FPKEKDSRCNANKNLRNKIPIDYF-VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            P               K  ID+   ++             E+  +  +    G++  DH
Sbjct: 212 APFPTLKLEEGYSYDDLKCTIDHIGYVN---ISPESNWGLRELETSIPERSRAGRQHPDH 268

Query: 296 CPISI 300
             + +
Sbjct: 269 DMVIL 273


>gi|227540901|ref|ZP_03970950.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227183161|gb|EEI64133.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 233

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 81/294 (27%), Gaps = 75/294 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   + +  + +     D D++ LQE          
Sbjct: 1   MRIATWNVN----------------SARARFGRITELLARHDIDVLALQETKIKEF---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +  +       +    +A+  +      Q+    G  D   +   R
Sbjct: 41  ------------PPVKGYEVAHVGYNQWNGVAILSRVGLKDVQT-SFTGQPDYEGKKEGR 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +     GK   + ++++ +   +D     Y           ++L ++      S  
Sbjct: 88  AISAV---CGGK--RIWNLYVPNGRAVDHPHYDYK---------LRFLYNFARYAAPSAD 133

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +  GDFN                +        ++ +     ++           A + 
Sbjct: 134 --LAMGDFNVIPGAEDVYDESPFETHVTEPERAAFEYLTDVLPVVSPTGYTYWDYQARRF 191

Query: 251 -LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                + ID+ +    A    +            D   R  + SDH P+  +Y+
Sbjct: 192 DRDQGMRIDFHLSTTPATSGFV------------DRAERAAKSSDHAPVICEYE 233


>gi|15639119|ref|NP_218565.1| exodeoxyribonuclease (exoA) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025359|ref|YP_001933131.1| exodeoxyribonuclease [Treponema pallidum subsp. pallidum SS14]
 gi|3322391|gb|AAC65116.1| exodeoxyribonuclease (exoA) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189017934|gb|ACD70552.1| exodeoxyribonuclease [Treponema pallidum subsp. pallidum SS14]
 gi|291059544|gb|ADD72279.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum str.
           Chicago]
 gi|313505256|gb|ADR64396.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum]
 gi|313505276|gb|ADR64415.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum str.
           Mexico A]
          Length = 264

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 73/302 (24%), Gaps = 69/302 (22%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83
           R++SWN+N +   E                     +      D++ LQE+    + ++  
Sbjct: 6   RIISWNVNGIRAIERKDF---------------LSWLAREAPDVLCLQEIKAHESQLSAA 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W                +    ++  A+  K      + + +            R
Sbjct: 51  LRAPVWSAGAGGTYY--TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAAR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                       ++ V+  +  +              C          + +  +++ +  
Sbjct: 109 F----------GELTVVSAYFPNAQEGGKRLAYKLDFC-------AAFRAFCDEERTAGQ 151

Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +                 +  W             +   +      
Sbjct: 152 HVILCGDYNIAHKEIDLAHPQENEGNPGFLPQERAWMDTFTEAGYADSFRAFCTEGQQYT 211

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY  +DQ     +        +             SDHCP+ +
Sbjct: 212 WWSYRARARARNIGWRIDYQCVDQAFLARVTSSQILSEVT-----------GSDHCPVCL 260

Query: 301 DY 302
            Y
Sbjct: 261 TY 262


>gi|322805921|emb|CBZ03486.1| exodeoxyribonuclease III [Clostridium botulinum H04402 065]
          Length = 263

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 92/297 (30%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N +               ++       L +     + D++ LQE+        +
Sbjct: 1   MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49

Query: 84  FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           F       F             +  +++        +     +A+  K++   ++S+ + 
Sbjct: 50  FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHLIKEKKSFYIS 109

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +KD       R+ ++  ++ N   I+    HL    + D  E+           QA  L
Sbjct: 110 KSKDKNFWK-TRKVIKCKIDYNNNPIYFYSCHL--GWWDDEEED--------FKFQANKL 158

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----N 246
            + + Q        ++ GD+N          D+       D       + +        +
Sbjct: 159 IEDLKQ----DETCILMGDYNNDAFLNNKGYDYLINKKLKDIYHLARSKDNGVTAIGDID 214

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K     + +D  + ++N      +  F+ I             +SDH  +    +
Sbjct: 215 GWKGNTKNMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262


>gi|255947092|ref|XP_002564313.1| Pc22g02690 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591330|emb|CAP97557.1| Pc22g02690 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 681

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/361 (11%), Positives = 95/361 (26%), Gaps = 72/361 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + S  +K+ ++S+N    S   Q       + V        L+    ++ +ADIV LQ
Sbjct: 303 TSSNSNTEKITVLSYNTLCDSSATQSHYGYVPSRVLSWEFRRELILNELRSHNADIVCLQ 362

Query: 73  EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           E+     +     ++   +   +++   R +   + D+      A   +     +L +  
Sbjct: 363 EVDQGSYNNFFREQLAYNDYKGVYWPRGRAMGMQEEDARMVDGCATFFKGSKYILLDKQL 422

Query: 129 PLLGAK-----------DSFSRAGNR-RAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
              G             D ++R   +     ++   N +             +  + ++ 
Sbjct: 423 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGARFISVNAHLYWDPAFKDV 482

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLV--------------------------------- 203
                ++L ++   L D   +                                       
Sbjct: 483 KLIQTAILMEEITKLSDNYAKWPACTDKTAFRFSEAESGSETTPVVEPAPSMEYTSGDQI 542

Query: 204 PFVIAGDFNRKINY-----------LGNNDDFWKTIDPNDSLIRFPKEK---------DS 243
           P ++ GDFN                  ++ D  K +  N S +                 
Sbjct: 543 PVLMCGDFNSSPGSAAYNLISTGRLPEDHPDLEKRLYGNLSKVGMTHPFKLKSAYSSMGE 602

Query: 244 RCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N        +DY     N  +   +     +               SDH  +  ++
Sbjct: 603 LSFTNYTSDFTAILDYVWYSSNTLHVSALLGEVDKEYLRRVPGFPNFHFPSDHVALLAEF 662

Query: 303 D 303
            
Sbjct: 663 T 663


>gi|260817292|ref|XP_002603521.1| hypothetical protein BRAFLDRAFT_79056 [Branchiostoma floridae]
 gi|229288840|gb|EEN59532.1| hypothetical protein BRAFLDRAFT_79056 [Branchiostoma floridae]
          Length = 282

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 86/287 (29%), Gaps = 31/287 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--A 79
             +++ ++NI              S         +L +  +    DI+ +QE+      A
Sbjct: 20  DGLKIGAFNIQIFGT---------SKMAQPEIADMLVRICQRY--DILLIQEVRDSTGTA 68

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS- 138
           +  +  +       +   +I+     + +    A   R      +  SY      ++   
Sbjct: 69  IVDLLNRVNSAGHANYGMVISDRLGRTTSKEQYAFFYRTDVGLTVTSSYHYDDGNEALGT 128

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R    +    +   +    +         ++E           Q    +++ I  +
Sbjct: 129 DTFEREPFIVRFSSSRTAVHDFVLVAIHTSPDHAVEE---------IQALDTVRESIVSR 179

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTI-DPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                  +I GDFN   NY+  +     ++     +              + N       
Sbjct: 180 WRITD-IMIMGDFNADCNYVRPSHWDSISLWTRYRTYDWLIGHDADTTVTSTNCAY---- 234

Query: 258 DYFVMD-QNAYKFLIQESFSEILYNEDDIKS-RGKRLSDHCPISIDY 302
           D  V+        ++  S S   ++ +   + + + +SDH P+ +D 
Sbjct: 235 DRIVVSGPTLKGSVLPHSASVYDFSRNLHCNCQAEAVSDHYPVEVDL 281


>gi|297197975|ref|ZP_06915372.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197715024|gb|EDY59058.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 279

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/285 (10%), Positives = 73/285 (25%), Gaps = 61/285 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------YN 78
           R+++WN+              +  R                  ++ LQE          +
Sbjct: 48  RVMTWNLCN-------PCKTGNDDR--------AAEIATFAPQVIGLQEACVGDVEKIRD 92

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +  +        + +  +          N      A+          +           
Sbjct: 93  YLENLHGLVYHVEYGAVLQSWGRCGGAPWNPGGYGEAILSAAPMTDVVTEEYPDGG---- 148

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            + +R  +E+   + G+ + V + HL                 ++ + Q   L   + + 
Sbjct: 149 -SEDRGYMEVTTTVGGRPVRVFNTHL-----------AERRQEAVRADQVGVLAKEVARH 196

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    ++ GDFN   +        W+     D   R      + C    + +     D
Sbjct: 197 DRA----IVIGDFNAVPDAYELTK-MWRLATDADPHCRP--GAATTCEPTTDWQ--SKFD 247

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y  +        +                   ++SDH  +  D +
Sbjct: 248 YVFLRG-----YVPARHRVHP----------NQVSDHHVLYADVN 277


>gi|146421647|ref|XP_001486768.1| hypothetical protein PGUG_00145 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 497

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 86/311 (27%), Gaps = 47/311 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             R+ S N+            ++ +KR       + ++   L+  +V LQE+  +     
Sbjct: 196 TFRIYSHNVRNGGRDILDPGEESWLKRYRKITASI-KFNSQLN-TVVALQEVYKFQLDDI 253

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD------- 135
           +   N +      E       R   + +   + +  K        Y  +   +       
Sbjct: 254 MRDLNRYSPPEEPEWEAYGVGRIDGDQLGEFVPILFKTSEWEMVFYDSIWLNEDNPRMAL 313

Query: 136 -SFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             +     R    + ++ ++G  I V + HL         E +      ++  +   +  
Sbjct: 314 EGWDAKYLRIVSYVTLKHVSGNYINVFNTHL-----DHMGELSKQGLAQIILDKMNSINQ 368

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNAN 248
           W         P  + GD N + N         +  +       F      K   +     
Sbjct: 369 W---------PSFLCGDLNTEPNEKAYQIITEQFRNLAKLTTAFNKYGHSKSTVTGFEGE 419

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----------------GKRL 292
             L     IDY     +    L +    + L      +                  G  +
Sbjct: 420 VLLNGGQNIDYIFA-PSYTAKLGETVLCDKLTTSPPSERYLDLRLKSFGMLHSKFNGLYM 478

Query: 293 SDHCPISIDYD 303
           SDH PI  D+ 
Sbjct: 479 SDHRPIVADFT 489


>gi|118361195|ref|XP_001013828.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89295595|gb|EAR93583.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 277

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 93/294 (31%), Gaps = 64/294 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           QK++ +S+N+    +   V                L++   N D D + +QE+     + 
Sbjct: 34  QKLKFISYNV-WFDQHNFV-----------ERSIELKKIFLNYDPDFICMQEVTQPFLIQ 81

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               K     +Y +   +N             + +  K     +Q +        F    
Sbjct: 82  LAQDKEICQKYYFSSPFVN----------QYDVFILSKYPISFKQMF--------FPSQM 123

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +   + IN +KI +   HL+S    D+             +Q + +K+ ++   ES
Sbjct: 124 GRNLLFGEININNRKIVIGTTHLESLKNNDNY----------RMEQLKIIKELLSSYDES 173

Query: 202 LVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               +  GDFN        +   N  D WK + PN+         +            + 
Sbjct: 174 ----IFMGDFNMSKLNEEQSIPENYIDIWKALHPNE---------EGHTMQASKKFPSVR 220

Query: 257 IDYFVM------DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            D  ++        +  + + ++       ++          SDH  +  +  F
Sbjct: 221 FDRVLLRQSTYWSPSHIEIIGKDPIPYYQNHQKKQIYEIVTPSDHYGLYAEISF 274


>gi|229823722|ref|ZP_04449791.1| hypothetical protein GCWU000282_01024 [Catonella morbi ATCC 51271]
 gi|229786761|gb|EEP22875.1| hypothetical protein GCWU000282_01024 [Catonella morbi ATCC 51271]
          Length = 275

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + +       +        ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSK------AVLDQLAQAGADIIAIQETKLSPTGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +     ++        S ++     +       +     + ++P +GA          
Sbjct: 55  KHEEILAEYFPGYAHTWRSSQEPARKGYAGTLFLYREHLQPKVTFPEIGAPS-------- 106

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +++ G+ I +                      +          D++    ++  
Sbjct: 107 -----TMDLEGRIITLEFDDCYVTQVYTPNAGDGLKRLAERQVWDAKYADYLVS-LDAKK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GDFN                           +  +        F        +  
Sbjct: 161 PVLATGDFNVAHQEIDLANPGANRQSAGFTDEERAGFTHLLSRGFTDSFRHLHGDVPHQY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +    +           DH PI
Sbjct: 221 TWWAQRSRTSKINNTGWRIDYWLVSDRIADKVTKSEMLDSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 LLEIN 274


>gi|94993733|ref|YP_601831.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10750]
 gi|94547241|gb|ABF37287.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10750]
          Length = 303

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 91/327 (27%), Gaps = 57/327 (17%)

Query: 3   RKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +  +++    +    +   + +++L+SWNI++L+        +  + R       +    
Sbjct: 7   KSLIVSFFVTITTRLSVRKRYQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 60

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              DADI+ +QE              T   ++     +  S  +     +       KN 
Sbjct: 61  VAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 120

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                ++P +GA  +    G       ++ +  +  +V  ++  +        +      
Sbjct: 121 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 174

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226
              +     L        ++  P +  GD+N               R   +       + 
Sbjct: 175 HKYADYLTEL--------DTQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 226

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276
            +        F        +       +            IDY++        + +    
Sbjct: 227 NLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRIVDKIKRSEMI 286

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
                +           DH PI +D D
Sbjct: 287 SSGERQ-----------DHTPILLDID 302


>gi|40063316|gb|AAR38134.1| exodeoxyribonuclease III [uncultured marine bacterium 578]
          Length = 254

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 89/304 (29%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +   E    +                + K  +AD+V LQE+    A    
Sbjct: 1   MRIITINVNGIRAAERKGFF---------------SWLKKQNADVVCLQEI---KAQEDQ 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +     T       K  S   ++              +   +  +      +  R
Sbjct: 43  LDERFYPPSMYTYYHSAERKGYSGTGLYCK-----------SKPDRVAYSPWEDINSEGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ +  ++ V+ I+L S    +  +       +            + + ++   
Sbjct: 92  I-----IQADFGELSVISIYLPSGSSKEERQAFKMEFITDRF------LPHLRKLQKDGR 140

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            ++I GD+N                   +L     +  T+      I   +E +      
Sbjct: 141 KYIICGDWNIAHKKIDLKNWRSNQKNSGFLPEERAWLDTLYDEVGYIDSFREINYDEFQY 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           +DY V+  N                      + +R SDH P+ 
Sbjct: 201 TWWSNRGQAWLNNTGWRLDYQVVSSNLAGLASSCEI-----------YKKERFSDHSPLI 249

Query: 300 IDYD 303
           IDY+
Sbjct: 250 IDYN 253


>gi|313206282|ref|YP_004045459.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
 gi|312445598|gb|ADQ81953.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
          Length = 395

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 76/296 (25%), Gaps = 35/296 (11%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
           ++    S++   +       + L          +V L E+ +   V  +  +     F  
Sbjct: 104 AKNYNTSIYNQKLINAARVISELGASVTKTAPVVVGLLEVENRQVVEDLVKQPALKKFDY 163

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEIN 153
                N         I  A+  +K+       +   L   +   R    R  + +   ++
Sbjct: 164 GVIHYNS---YDYRGIDVALIYQKRRFSPTYSTKKELKIYNEEGRREYTRDLLVVSGYLD 220

Query: 154 GKKIWVLDIHLKSFCFLDSLE-NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           G+K+     H  S    +++     + +  LL  Q   ++       ++    +  GDFN
Sbjct: 221 GEKVAFFVNHWPSRRGGEAVSLPKRNAAAQLLRAQMDSVRAL-----DANTKLIAMGDFN 275

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEK------DSRCNANKNLRNKIPIDYFVMDQNA 266
                    +         +    +P              +          D  ++ +N 
Sbjct: 276 DDPISSSFKNHLKAVGSVKELSPEYPYINLMYPLYKKGVASLAYRDAPNLFDQIIVSENL 335

Query: 267 YKFLIQE-------------------SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                     SF    +   +        SDH P+     
Sbjct: 336 VNPKDTSYSVFRTEVYAPAYLINKEGSFKGYPFRSWNGDKFTGGYSDHFPVFTILS 391


>gi|281312468|sp|Q28FQ5|TYDP2_XENTR RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
           homolog
          Length = 373

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 81/285 (28%), Gaps = 46/285 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
              ++WNI+ L E                    +  Y      D+VFLQE+         
Sbjct: 125 FSFLTWNIDGLDESN-----------VAERARGVCSYLALYSPDVVFLQEV--------- 164

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +     +       + ++  TA+ ++K  V+++ Q      +         R
Sbjct: 165 --IPPYYEYLKKRAVSYTIITGNEDEYFTAMMLKKSRVKLISQEIVPYPST-----VMMR 217

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   V I+G  I ++  HL+S                   +Q   +   +      L 
Sbjct: 218 NLLVANVNISGNSICLMTSHLEST----------KDHSKERLKQLDIVLKKMMD-APPLA 266

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI------PI 257
             +  GD N +   +         I      +  P+      +   N   +         
Sbjct: 267 TVIFGGDTNLRDQEVAKIGGMPNNILDVWDFLGKPEHCRYTWDTKVNKNLRAPYICRLRF 326

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D      +  +   Q     +     +    G+  SDH  +  D+
Sbjct: 327 DRIFFRAS--QEGSQVIPQSLYLAGTEKLDCGRFPSDHWGLLCDF 369


>gi|228983625|ref|ZP_04143829.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228776110|gb|EEM24472.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 263

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEGLKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQVNRLMEHVD----SNEISFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNI---------ISDHFGVEVQVD 262


>gi|62858529|ref|NP_001016944.1| tyrosyl-DNA phosphodiesterase 2 [Xenopus (Silurana) tropicalis]
 gi|89268280|emb|CAJ81630.1| novel protein similar to ttrap [Xenopus (Silurana) tropicalis]
 gi|183986439|gb|AAI66146.1| TRAF and TNF receptor associated protein [Xenopus (Silurana)
           tropicalis]
          Length = 384

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 81/285 (28%), Gaps = 46/285 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
              ++WNI+ L E                    +  Y      D+VFLQE+         
Sbjct: 136 FSFLTWNIDGLDESN-----------VAERARGVCSYLALYSPDVVFLQEV--------- 175

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +     +       + ++  TA+ ++K  V+++ Q      +         R
Sbjct: 176 --IPPYYEYLKKRAVSYTIITGNEDEYFTAMMLKKSRVKLISQEIVPYPST-----VMMR 228

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   V I+G  I ++  HL+S                   +Q   +   +      L 
Sbjct: 229 NLLVANVNISGNSICLMTSHLEST----------KDHSKERLKQLDIVLKKMMD-APPLA 277

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI------PI 257
             +  GD N +   +         I      +  P+      +   N   +         
Sbjct: 278 TVIFGGDTNLRDQEVAKIGGMPNNILDVWDFLGKPEHCRYTWDTKVNKNLRAPYICRLRF 337

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D      +  +   Q     +     +    G+  SDH  +  D+
Sbjct: 338 DRIFFRAS--QEGSQVIPQSLYLAGTEKLDCGRFPSDHWGLLCDF 380


>gi|229089490|ref|ZP_04220760.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
 gi|228693876|gb|EEL47569.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
          Length = 263

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262


>gi|293365069|ref|ZP_06611786.1| endonuclease/exonuclease/phosphatase family protein RgfB
           [Streptococcus oralis ATCC 35037]
 gi|307702222|ref|ZP_07639182.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           oralis ATCC 35037]
 gi|291316519|gb|EFE56955.1| endonuclease/exonuclease/phosphatase family protein RgfB
           [Streptococcus oralis ATCC 35037]
 gi|307624235|gb|EFO03212.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           oralis ATCC 35037]
          Length = 271

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 75/281 (26%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L Q     D D++  QE+       +V   N +    S                
Sbjct: 17  EEKFQILLQDILEKDYDLICFQEINQEMTSPEVEVNNHYQALPSAEPIHQDHYVQLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR   +
Sbjct: 77  LAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVALV 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ GK++ +  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETEVEGKELALASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLILA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      GN       +   D+     +   S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGNQAILASPLGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                          ++SDH  ++    +
Sbjct: 239 KEL---------EVESLQVVFDGQNSPQVSDHYGLNAVLTW 270


>gi|315636243|ref|ZP_07891495.1| exodeoxyribonuclease III [Arcobacter butzleri JV22]
 gi|315479452|gb|EFU70133.1| exodeoxyribonuclease III [Arcobacter butzleri JV22]
          Length = 262

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 77/308 (25%), Gaps = 71/308 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A++ + +SWN+N +   +                    ++   ++ D++ +QE  S    
Sbjct: 2   AKRYKFISWNVNGIRAVDKKDA---------------LKWIDEIEVDLLGVQETKS---- 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                K+       ++         S     +  A+        Q     +   D     
Sbjct: 43  ----MKDQIPKTIFSKEFKTLFASASAIKGRSGTALFSDIEPTFQSICESVDILDEGR-- 96

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                 E+   +  K I   +++  +        +             + L       K+
Sbjct: 97  ----INEIHFNLADKNIAFFNVYFPNGQSSQERLDYKMEFYDRFLNHCENL-------KK 145

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWK-------TIDPNDSLIRFPKEKDSRCNA------ 247
                ++ GD N     +                ++ +                      
Sbjct: 146 DGKSIIVCGDVNTAHTEIDIARPKANENTSGFLQMERDWITKFLSHGYIDTFRLINGDIK 205

Query: 248 --NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDYF +  +              Y +D         SDHC
Sbjct: 206 DKYSWWSYRANARANNVGWRIDYFYVSSDLKD-----------YVKDAYILDNIEGSDHC 254

Query: 297 PISIDYDF 304
           PI ++ +F
Sbjct: 255 PIGLEMEF 262


>gi|297290189|ref|XP_001105245.2| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Macaca mulatta]
          Length = 388

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 82/285 (28%), Gaps = 48/285 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
            ++WNI+ L                +     +  Y      D++FLQE+           
Sbjct: 142 FITWNIDGLDLNN-----------LSERARGVCSYLALYSPDVIFLQEV----------- 179

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
              +  +                   TAI ++K  V++  Q      +         R  
Sbjct: 180 IPPYYSYLKKRASDYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPST-----KMMRNL 234

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           + + V ++G ++ ++  HL+S               +    Q + +   + +        
Sbjct: 235 LCVHVNVSGNELCLMTSHLEST----------RGHAAERMNQLKMVLKKMQE-APESATV 283

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPIDY 259
           + AGD N +   +         I      +       +  +     N       K+  D 
Sbjct: 284 IFAGDTNLRDQEVTKCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRFDR 343

Query: 260 FVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 344 IFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 385


>gi|151553571|gb|AAI48925.1| Deoxyribonuclease I-like 1 [Bos taurus]
          Length = 316

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 72/289 (24%), Gaps = 33/289 (11%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           AS A+  R+ ++N   L+          +          L +       DI+ LQE+   
Sbjct: 23  ASGAETFRICAFNAQRLTL---------AKVAREPVLDTLVKILARC--DIMVLQEVVDS 71

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLLGAKDS 136
           +  A          F  +    +HS        +        ++     +   +   +D 
Sbjct: 72  SDTAIPLLLRELNRFGDSGPYASHSSLLLGRSTYKEKYVYLYRSHEAEVRDSYMYDDQD- 130

Query: 137 FSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 R        +  K    + ++ +H         L   Y        +       
Sbjct: 131 --DLFTREPFVCWFSLRSKVLPSLVLVPLHTTPKAVETELNALYDVFLDASGRW------ 182

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                       ++ GDFN     L         +           +             
Sbjct: 183 -------QTKDVILLGDFNADCTSLTKKRLDDLVLRTQAGFHWAIADGVDTTVRASTHCT 235

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              I   +  ++    L   +  +   +    +     +SDH P+ +D 
Sbjct: 236 YDRI--VLHGEHLQSLLRGAAAFDFPQSFGLTEQEALNISDHYPVEVDL 282


>gi|119503212|ref|ZP_01625296.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2080]
 gi|119460858|gb|EAW41949.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2080]
          Length = 259

 Score = 73.0 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 85/306 (27%), Gaps = 78/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           +R+++ N N +   +    +                +    DAD V +QE  +       
Sbjct: 1   MRVITCNTNGIRAAQRKGFF---------------SWLSQQDADFVCIQETKAQIHQLDP 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F    +   Y+  +   +          +  AV  +       +       DS  R  
Sbjct: 46  ALFAPEGYHCTYNDAQKPGY----------SGTAVFSRIKPKTVVTKLGWEPMDSQGRY- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   ++ + K   V+ +++ S    ++ ++             Q LK         
Sbjct: 95  --------LQADFKGFSVISLYVPSGSSGEAAQDRKEIFMEKFLPHLQALKR-------K 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
              F+I GD+N     +   +                +   +      +   +  +   +
Sbjct: 140 RREFIICGDWNICHREIDLKNWRGNRKNSGFLPHERAWLDRVYDELGWVDVFRRINPNPD 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           +DY +            S             R +R SDH P
Sbjct: 200 QYTWWSNRGQAWAKNVGWRLDYMLCTPGIASAGSSASI-----------YRDERFSDHAP 248

Query: 298 ISIDYD 303
           + ID+D
Sbjct: 249 LIIDFD 254


>gi|325924898|ref|ZP_08186330.1| exodeoxyribonuclease III [Xanthomonas perforans 91-118]
 gi|325544685|gb|EGD16036.1| exodeoxyribonuclease III [Xanthomonas perforans 91-118]
          Length = 266

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +                +    DAD++ +QE  +     ++
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQETKAQE--HQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +         +  S    ++ +A+  ++     ++       D   R    
Sbjct: 44  AGPD-----FLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  ++          Q  QWL+  + Q   S  
Sbjct: 96  ------IEARFGNLSVVSFYIPSGSSGELRQDYK-------FQVMQWLRPILEQWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN------DSLIRFPKEKDSRCNA---------- 247
            +V+ GD+N     L   +      +        D L     +     N           
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADAPEDTNPAEGRGWVDSY 202

Query: 248 ---------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       L   S             R 
Sbjct: 203 RVLHPQGQDYTWWSNRGAARANNVGWRIDYQLVTPGLRDTLKACSI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 ERFSDHAPYIVDY 264


>gi|260431780|ref|ZP_05785751.1| endonuclease/exonuclease/phosphatase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415608|gb|EEX08867.1| endonuclease/exonuclease/phosphatase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 347

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 98/335 (29%), Gaps = 56/335 (16%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-- 75
           A+ AQ++R+ ++N     +++G  L    ++R       +         DIV LQ +   
Sbjct: 13  AAQAQELRIATFNTEL--QRDGPGLLLRDIQRDHHQVRAVVDVLVATKPDIVALQGIDWD 70

Query: 76  -SYNAVAKVFP-----KNTWCIFYSTERLINH-----------------SKRDSNNDIHT 112
               A++++          +   +S++                      S+         
Sbjct: 71  HEQRALSELAGKLSAAGLNYLHLFSSQPNSGMMTPSDLDGDERLGGAGDSQGWGRFTGQG 130

Query: 113 AIAVRKKNVRVLQQ-------SYPLLGAKDSFSRAGNRRAV---------------ELLV 150
            +AV  K   V  +        +  L       R G+                    + +
Sbjct: 131 GLAVLSKFPIVSDEFRDYSQLRWRDLPGASLPKRDGSPFPSDQAQSIQRLSSTGHWIVPI 190

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
           +    ++ ++  H     F    +     +   +   +  L   +         FVIAGD
Sbjct: 191 DTPLGRLNLMTFHATPPVFDGPEDRNGLRNRDEIRFWSVLLNGGL--GPAPTDRFVIAGD 248

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYK 268
            N        + D  + +  +  L        +  +     ++     +DY +       
Sbjct: 249 ANLDPFRGEGHTDAIRDLLAHPLLQDPAPRDSNGSDTTVQWKSVGERRVDYVLPS---TD 305

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + I+ +    L    D+    +  S H  + +D  
Sbjct: 306 WKIEHAGIYWLDANGDVVPAAQTASRHRLVWVDLS 340


>gi|167585100|ref|ZP_02377488.1| exodeoxyribonuclease III Xth [Burkholderia ubonensis Bu]
          Length = 257

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 85/307 (27%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +               ++    +AD V +QE  + + +  A
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIKVSADDLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    +    ++       +S     +       +              +G   S   + 
Sbjct: 47  EFVEPHGLRSYFHHAEKKGYSGAGLYSRREPDDVI--------------IGFGSSEFDSE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ V+ +++ S    D  +                L        + 
Sbjct: 93  GRY-----VEARYGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KK 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N     +   +                +   +  +   +   +  D R  
Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTQLFDDVGYVDVFRALDPRPE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +          + S             +  + SDH P
Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKRTSI-----------FKDIKFSDHAP 248

Query: 298 ISIDYDF 304
           +++DYD+
Sbjct: 249 LTVDYDY 255


>gi|49479897|ref|YP_034699.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|196045232|ref|ZP_03112464.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB108]
 gi|218901573|ref|YP_002449407.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH820]
 gi|225862411|ref|YP_002747789.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB102]
 gi|228925624|ref|ZP_04088713.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228931871|ref|ZP_04094767.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|229120029|ref|ZP_04249284.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
 gi|229182756|ref|ZP_04309996.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
 gi|49331453|gb|AAT62099.1| possible endonuclease/exonuclease/phosphatase family protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|196023816|gb|EDX62491.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB108]
 gi|218537236|gb|ACK89634.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH820]
 gi|225785970|gb|ACO26187.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB102]
 gi|228600729|gb|EEK58309.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
 gi|228663495|gb|EEL19080.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
 gi|228827851|gb|EEM73589.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228834102|gb|EEM79650.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 263

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262


>gi|297161245|gb|ADI10957.1| hypothetical protein SBI_07837 [Streptomyces bingchenggensis BCW-1]
          Length = 271

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 75/297 (25%), Gaps = 49/297 (16%)

Query: 9   LVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           +V   +P +A+      VR++S+NI                     D   L +  +    
Sbjct: 1   MVLADLPASATAQDAAVVRVLSYNIR----------------SMRDDREALVRVVRACAP 44

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQ 125
           D++ +QE               W    S           +     T   +       V +
Sbjct: 45  DVLCVQEAP---------RFFRWRKAASWLARETGLVHTTGGATATGPMLLTSLRAHVER 95

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
               LL       R   R     ++   G           +   L  +    S + +   
Sbjct: 96  TEDILLPHVPGLHR---RGLATAVLRFGGGH------RGDNGIRLGVVSCHLSLAEAERY 146

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            QA  + D + +    +   V+AGD N                D   +     +      
Sbjct: 147 DQAGMVLDQLARL--DVPYTVLAGDINDPPEGRAFRRLAGPLRDAWATEPWGSELT---- 200

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 + +  ID     +                 E D+    +  SDH P+    
Sbjct: 201 --YPPGQPRERIDALFATEGVEILGCGVPAGLPGVTEADL----RAASDHLPVLAAL 251


>gi|196034583|ref|ZP_03101991.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus W]
 gi|228944177|ref|ZP_04106556.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|195992626|gb|EDX56586.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus W]
 gi|228815566|gb|EEM61808.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 263

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262


>gi|163740390|ref|ZP_02147784.1| hypothetical protein RG210_09822 [Phaeobacter gallaeciensis 2.10]
 gi|161386248|gb|EDQ10623.1| hypothetical protein RG210_09822 [Phaeobacter gallaeciensis 2.10]
          Length = 354

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 85/339 (25%), Gaps = 56/339 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ-- 72
           P  A  A+ +R+ S+N   LS +    L ++  +        + Q     DADI+ LQ  
Sbjct: 18  PAEADPAKTLRIASFNTE-LSRKGPGLLLRDLQRGKDPQVGAILQTLTEADADILVLQGI 76

Query: 73  ----EMGSYNAVAKVFPKNTWCIFYSTERLINHSK-------------------RDSNND 109
               E  S   +  +  K      +      N                            
Sbjct: 77  DWDHEGRSVTELRNLLSKRIPRYGHIYAARPNTGMQTGHDMDGDGRLGTARDAQGYGRFT 136

Query: 110 IHTAIAVRKKNVRVLQQSYPL------------LGAKDSFSRAGNRRAVELL-------- 149
               +A+  +   +  +   L            L      +   +R A+           
Sbjct: 137 GQDGMAILSRLPILRAEVRDLSELLWQDLPGATLPTYPHGTPFPSRDALAAQRLSTTGHW 196

Query: 150 ----VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               +  +G+++ V+        F    +     +   +      L   +        P+
Sbjct: 197 IVPILLPSGEQLSVMAFQATPPLFDGPEDRNGLRNQDEIRLWQVLLDGGL--GPTPTEPW 254

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPIDYFVMD 263
           VI G  N   +           +  +  L        +      N      + +DY +  
Sbjct: 255 VIVGGANLDPDKGAGRRTAIADLLRDPRLQDPRPPDAAGRTDTVNWGTSGSMRVDYVLPS 314

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +     ++                  +  S H  +  D 
Sbjct: 315 RALQ--VVASGLIWPAEITAKEGGADRPASRHALVWTDL 351


>gi|133712474|gb|ABO37085.1| ExoA [Treponema paraluiscuniculi]
          Length = 264

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 73/302 (24%), Gaps = 69/302 (22%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83
           R++SWN+N +   E                     +      D++ LQE+    + ++  
Sbjct: 6   RIISWNVNGIRAIERXDF---------------LSWLAREAPDVLCLQEIKAHESQLSAA 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W                +    ++  A+  K      + + +            R
Sbjct: 51  LRAPVWSAGAGGTYY--TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAAR 108

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                       ++ V+  +  +              C          + +  +++ +  
Sbjct: 109 F----------GELTVVSAYFPNAQEGGKRLAYKLDFC-------AAFRAFCDEERTAGQ 151

Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N     +                 +  W             +   +      
Sbjct: 152 HVILCGDYNIAHKEIDLAHPQENEGNPGFLPQERAWMDTFTEAGYADSFRAFCTEGQQYT 211

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY  +DQ     +        +             SDHCP+ +
Sbjct: 212 WWSYRARARARNIGWRIDYQCVDQAFLARVTSSQILSEVT-----------GSDHCPVCL 260

Query: 301 DY 302
            Y
Sbjct: 261 TY 262


>gi|149238650|ref|XP_001525201.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450694|gb|EDK44950.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 547

 Score = 73.0 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 104/334 (31%), Gaps = 52/334 (15%)

Query: 2   IRKYVLALVFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ- 59
           ++   ++++   +    S  +++ +L+++N   L       + K+   R  +    L   
Sbjct: 83  VKLIRVSMLTLDISTDCSSRKQLIKLLTFNTWGL-----KFVSKHRKHRLQAIADELANP 137

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                D DIV LQE+        +       +  +        K         AI  ++ 
Sbjct: 138 KTVEDDYDIVALQEIWCEEDWDYLD-----RVCRNRYPYRRVFKSGIITGPGLAILSKQP 192

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI------NGKKIWVLDIHLKSFCFLDSL 173
            V      +P+ G   +F R        + V I          I +L+ H+ +       
Sbjct: 193 IVETFLYRFPINGRSSAFFRGDWYVGKSISVTIFQPHKEGSLPIALLNSHMHAPYGHGDA 252

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFW 225
             +   +C     QA      +   K++    +  GD N K   L            D W
Sbjct: 253 SYSTHRAC-----QAWDFAKLVRMLKKAGYAVIQVGDLNSKPESLPYKIFTVEGGLTDSW 307

Query: 226 KTIDPNDSLIRFPKEKDSR------------CNANKNLRNKI-----PIDYFVMDQNAYK 268
             +  +D +      K S                N   +N+       +DY ++D N   
Sbjct: 308 NVLHKDDLMNAAELAKLSPEDQIALGGVTCNSRLNTWRKNRRLSEACRLDYALIDANNIV 367

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +        +  +  + S     SDH   S+++
Sbjct: 368 PVTAGVKFTGILPKPWLCSY----SDHFAYSVEF 397


>gi|317025526|ref|XP_001389249.2| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Aspergillus niger CBS 513.88]
          Length = 749

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/363 (10%), Positives = 99/363 (27%), Gaps = 77/363 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + S  +K+ ++S N    S           + V        L+    ++ D+DI+ LQ
Sbjct: 372 SSSNSPTEKITVLSHNALCDSSATPSHFGYTPSRVLSWEFRRELILSELRSHDSDIICLQ 431

Query: 73  EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           E+     +     ++   +   +++   R +   + ++ +    A   +     +L +  
Sbjct: 432 EIDQGSYNGFFREQLAYNDYKGVYWPRGRAMGMQEEEAKSVDGCATFFKGSKFILLDKQM 491

Query: 129 PLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSL 173
              G             D ++R   +  + +++     + G +  V++ HL    +  + 
Sbjct: 492 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVIFLENRLTGSRFIVVNAHL---YWDPAF 548

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV------------------------------ 203
           ++      ++L ++   L +   +                                    
Sbjct: 549 KDVKLIQTAILMEEITKLSEKYAKFPPCTDKTAFRFSEAEGESDTPPPEPAPSVEYASGD 608

Query: 204 --PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR-- 244
             P  + GDFN        N                  +  +        F  +      
Sbjct: 609 QIPLFMCGDFNSAPGSAAYNLVAHGRLTESHPDLEKRLYGNLSRVGMTHPFKLKSAYNSI 668

Query: 245 ---CNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 N     K  +DY        +   +     +    +          SDH  +  
Sbjct: 669 GELSFTNYTPDFKDILDYIWYTSNTLHVSALLGEVDKEYLQKVPGFPNFHFPSDHVALFA 728

Query: 301 DYD 303
           ++ 
Sbjct: 729 EFT 731


>gi|301755468|ref|XP_002913572.1| PREDICTED: deoxyribonuclease gamma-like [Ailuropoda melanoleuca]
          Length = 304

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 91/285 (31%), Gaps = 32/285 (11%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-----A 79
           RL S+N+ +  E         + K   +   ++ +  K    DI+ L E+   N      
Sbjct: 22  RLCSFNVRSFGE---------AKKENKNAMDVITKVIKRC--DIILLMEIKDSNNMICPT 70

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + +    N+         + +   R++  + + A   ++K V V ++SY     +   + 
Sbjct: 71  LMERLNGNSRRGIMYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KKSYLYHDYQAGDAD 128

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +R    +  +     +    I         S++     +      + +W         
Sbjct: 129 VFSREPFVVWFQSPYTVVKDFVIVPLHTTPETSMKEIDELADVYWDVKRRW--------- 179

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                F+  GDFN   +Y+         +  +   +    +++              I  
Sbjct: 180 -KTENFIFMGDFNAGCSYVPKKAWKNIRLRTDPEFVWLIGDQEDTTVKRSTSCAYDRI-- 236

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
            +  Q     ++ +S S   + +    +  + L  SDH P+    
Sbjct: 237 VLRGQEIISSIVPKSNSTFNFQKAYELTEEEALDVSDHFPVEFKL 281


>gi|91206583|sp|Q2QDE6|DNSL1_CRIGR RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X;
           AltName: Full=Deoxyribonuclease I-like 1; Short=DNase
           I-like 1; Flags: Precursor
 gi|73921498|gb|AAZ94279.1| DNase X [Cricetulus griseus]
          Length = 304

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 73/298 (24%), Gaps = 33/298 (11%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           V  L+   A   +  R+ ++N   L+          S          L Q       DI+
Sbjct: 11  VALLLIFLAGGTEAFRICAFNAQRLTL---------SKLAKEPVMDTLVQILARC--DIM 59

Query: 70  FLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
            LQE+   +       +   N +    +   L +     S          R    ++L  
Sbjct: 60  VLQEVVDSSQKTVSLLLRELNRFDSSRTYSFLNSSLLGRSTYKEKYVYIYRSDKTQILNS 119

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLS 185
                   +  +    R        +  K +  V+ + L +       E        L  
Sbjct: 120 -----YQYNDTNDLFAREPFVAQFALPSKILPSVVLVPLHTTPKDVEKELNALYDVFLDV 174

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            Q                  ++ GDFN     L         +           + +   
Sbjct: 175 SQRWQ-----------NEDVILLGDFNADCASLTKKRLNSLLLRTEAGFHWVISDGEDTT 223

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      I   +  Q     L   +      +    +     +SDH P+ ++  
Sbjct: 224 VRASTNCTYDRI--VMHGQGCQTLLRAAAPFNFPRSFQLTEEEALSISDHYPVEVELS 279


>gi|109896865|ref|YP_660120.1| endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica
           T6c]
 gi|109699146|gb|ABG39066.1| Endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica
           T6c]
          Length = 391

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/372 (11%), Positives = 96/372 (25%), Gaps = 92/372 (24%)

Query: 21  AQKVRLVSWNI-----NTLS---EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           A+ VR+ ++N+     N L       G  L++N           + +  + +  DI+ L 
Sbjct: 20  AKTVRIATFNVSMEASNYLPKGVTPTGQELFENLQSGDNQQIKNIAEIIQRVRPDIILLN 79

Query: 73  EMGSYNAVAKVFPKN---------------TWCIFY------------------STERLI 99
           E    +   K                     +  +Y                  ++    
Sbjct: 80  EFDYTSDDDKGVKAFISHYLAVSQLGTKSIDYPYYYIAPVNTGVPSGVDLNHNGTSTDNG 139

Query: 100 NHSKRDSNNDIHTAIAVRKKNVR-------------------------VLQQSYPLLGAK 134
             +           + +  +                              + +       
Sbjct: 140 GDTFAFGLYPGQYGMVLLSRFPIEREQLRTFQHFLWKDMPNGLLNSVKTEEGADWYSPQA 199

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--- 191
            +  R  ++   ++ + I+GK + VL  H     F          +   +     ++   
Sbjct: 200 KAIFRLSSKSHWDVPISIDGKLVHVLASHPTPPVFDGPENRNGKRNHDEIRFWTDYISGG 259

Query: 192 --KDWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------D 232
              D+I   K+         FV+ GD N        + D   ++  N             
Sbjct: 260 KGADYIYDDKQQRGGLRSEHFVVLGDLNASAEEGDGHKDGIGSLLKNSKVNSHNIPMSAG 319

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
             +  P+      +       ++  DY +  +   +      F            + ++ 
Sbjct: 320 GAVHSPENALGASHTAFW---RMRADYVLPSKKLGEVSTSGVFWPTSDEASYRLIQNRQA 376

Query: 293 -SDHCPISIDYD 303
            SDH  + +D D
Sbjct: 377 SSDHRLVWVDVD 388


>gi|333025455|ref|ZP_08453519.1| hypothetical protein STTU_2959 [Streptomyces sp. Tu6071]
 gi|332745307|gb|EGJ75748.1| hypothetical protein STTU_2959 [Streptomyces sp. Tu6071]
          Length = 334

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/350 (10%), Positives = 76/350 (21%), Gaps = 77/350 (22%)

Query: 1   MIRKYVLALVFFLVPCTASVA---------QKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M    + ALV      + + A           +R++++N+   +   G          T 
Sbjct: 1   MAISALTALVLTAGAVSPASAAGFTNNPNPDTLRVLTYNVCMNTRCAGTYGLAG----TE 56

Query: 52  SDYTLLRQYAKNLD-----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                ++++  N D      D++ LQE               +    +            
Sbjct: 57  DRLRQIQEWVVNRDGQSRRPDVLVLQEA-------------NYKEVSTGTAGDGEKLEAI 103

Query: 107 NNDIHTA-------IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
             +   A       I      + V       +G  D+ S+              G     
Sbjct: 104 FEEYKIASKQDERWILYNTSTLSVTDSGTVGVGEPDAASKVFP----WAQFARKGTNNRA 159

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
             + +         +            +   L   +          V+AGDFN +     
Sbjct: 160 TVVDVHLANGDAERQGR----------ELDRLAAGLGAALPLGTRTVVAGDFNARRTDAT 209

Query: 220 NNDDFWKTIDPNDSLIRF----------PKEKDSRCNANKNLRNKI-----PIDYFVMDQ 264
                         L               +  +   +             PID+     
Sbjct: 210 AAHVNDAFASRTGPLTDAVPAGRRTSTLHAKTFTTAYSPVWYGEPEGAGNLPIDHVYFGS 269

Query: 265 NA----------YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                                +     +        R SDH  +  +  +
Sbjct: 270 GLHCVPGAGQVYKDRGEPRVVTSQAEEDARWAEVHARRSDHNAVYTELSW 319


>gi|289741011|gb|ADD19253.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 [Glossina morsitans morsitans]
          Length = 627

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/325 (10%), Positives = 84/325 (25%), Gaps = 46/325 (14%)

Query: 25  RLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
           R+VS+NI          S             +      L+ +     +ADI+ LQE+   
Sbjct: 296 RIVSYNILADLYADTDYSRTHLFPYCPAYALKADYRKQLIIKEILGYNADIICLQEVDVK 355

Query: 77  --YNAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                +  +   +         ++ I      +  ++     +  +N  + +    L   
Sbjct: 356 FFNFDLQHILEDDQQAFKGLLAQKGICGEGVATFYNVKRFDLLETRNFNIGENIRVLTIF 415

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWV----LDIHLKSFCFLDSLENTYSPSCSLLSQQA- 188
           +D + +      +   +      + +    +          ++    +  +  +   Q  
Sbjct: 416 RDLWQKIQTNEKLAERICDRSTTLQLTLLKMKECEHYLLVANTHLYFHPDADHIRLLQFG 475

Query: 189 ----------QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                     + L   +   +E+ +  V +GDFN      G      +    +D +    
Sbjct: 476 LSMLYIEDMYRKLIKQLNLNEENQLAVVFSGDFNSVP-ECGIFRLMTEGFVEDDFIDWRS 534

Query: 239 KEKDS------------------RCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEIL 279
             +++                      N        +DY            +    +   
Sbjct: 535 NTEEALAGVSLKQPFRMQSACGTPQYTNFTHAFAACLDYIFYQSDRLDVEQVVPLPALEE 594

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
                        SDH  +  D  F
Sbjct: 595 LKSHIAIPSVVFPSDHVALVADLRF 619


>gi|225555928|gb|EEH04218.1| endonuclease/exonuclease/phosphatase [Ajellomyces capsulatus
           G186AR]
          Length = 307

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 76/303 (25%), Gaps = 31/303 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        K    R       L  ++ +     + LQE+        
Sbjct: 8   PIRILTHNIRY-ATSAPFRGEKPWKDRKQRLLNELHYHSCHNPETFICLQEVLHVQLNDI 66

Query: 83  VFPKNT-------------------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   N                    W            +   S      A+   +++  V
Sbjct: 67  LSGLNPSTSTSTSTSTSTSTGATTEWAYIGVGRDDGKQAGEYSPIFYRPAVWELEESKTV 126

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                P +     +  +  R     + +    +  VL +        D    +   +  L
Sbjct: 127 WLSETPSVP-SRGWDASSIRIVTIGVFKHLVSRKRVLGMSTHL---DDQGSKSRYEAAKL 182

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKE 240
           +   A            ++    +AGDFN + N            + +D    +    + 
Sbjct: 183 ILTMANLYLTKNRLASRNINGIFLAGDFNSEENQEAYRVLTAVDSQFVDAQKQVDTALRY 242

Query: 241 KDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDY ++       +      E      +    G   SDH  +
Sbjct: 243 GSENTYTGFGYEDEGPKRIDYVLIGPKHG--VNPAWSVEGYAVVPNKFDDGVLNSDHRAV 300

Query: 299 SID 301
             D
Sbjct: 301 VAD 303


>gi|12862077|dbj|BAB32346.1| unnamed protein product [Mus musculus]
          Length = 385

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/330 (13%), Positives = 77/330 (23%), Gaps = 70/330 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 2   LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57

Query: 82  --KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136
              +         +S  R           D  T +A           L       G  D 
Sbjct: 58  PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDE 117

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           F++   R                 +E   K + +++++                  +   
Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPX------KPERLTFKM 171

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDPN 231
           +  + L+        +    +I GD N                             +   
Sbjct: 172 RFYRLLQMRAEPLLAAGSHVIILGDLNTAHRPIDHCDASSLECFEXDPGRKWMDGLLSNP 231

Query: 232 DSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVMDQNAYKFLIQE 273
                             +                        +DY + D+         
Sbjct: 232 GDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRAL------- 284

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               I   +          SDHCP+    +
Sbjct: 285 ---VIDTFQASFLLPEVMGSDHCPVGAVLN 311


>gi|57101132|ref|XP_533780.1| PREDICTED: similar to Deoxyribonuclease gamma precursor (DNase
           gamma) (Deoxyribonuclease I-like 3) (DNase I homolog
           protein DHP2) (Liver and spleen DNase) (LS-DNase) (LSD)
           [Canis familiaris]
          Length = 304

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 89/285 (31%), Gaps = 32/285 (11%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-----A 79
           RL S+N+ +            + +   +   ++ +  K    DI+ L E+   N      
Sbjct: 22  RLCSFNVRSFG---------GAKRENKNAMDVIVKVIKRC--DIILLMEVKDSNNMICPT 70

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + +    N+         + +   R++  + + A   ++K V V ++ Y     +   + 
Sbjct: 71  LLEKLNGNSRRGIKYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KKYYLYHDYQAGDAD 128

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +R    +  +     +    I                 S   + +      D   + K
Sbjct: 129 VFSREPFVVWFQSPFTAVKDFVIVPLHTTP--------EASVKEIDELVDVYLDVKRRWK 180

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                F+  GDFN   +Y+         +  +   +    +++     +        I  
Sbjct: 181 AEN--FIFMGDFNAGCSYVPKKAWKIIRLRTDPGFVWLIGDQEDTTVKSSTHCAYDRI-- 236

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
            +      + ++  S S   + +  + +  + L  SDH P+    
Sbjct: 237 VLRGPEIIRSVVPRSNSTFDFQKAFLLTEEEALNVSDHFPVEFKL 281


>gi|157828223|ref|YP_001494465.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|157800704|gb|ABV75957.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 271

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 72/304 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           +V+WNIN+L                     LLR+ A     DI+ LQE    +++     
Sbjct: 3   IVTWNINSL----------------RLRIDLLRKLAYEHQPDIILLQETKVADSL----- 41

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                     + +       S    +  +A+  K       S  L  +         R  
Sbjct: 42  ----FPLEVIKNIGYEHVIYSGQKSYNGVAIISKFPLNNVFSLELYNSDK-------RHI 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
             ++ +I     +V           D  +   +       +  + +++W+T  +      
Sbjct: 91  AAMVNDIEIHNFYV-------PAGGDIPDIEVNTKFKHKLEYIRLMQEWLTTNRTKNDKM 143

Query: 206 VIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +I GD N   +                         +  +    +               
Sbjct: 144 IIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFIDSSRHFVSLDEKFYT 203

Query: 250 NLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               +            +D+  +  N    L          +           SDH P  
Sbjct: 204 WWSYRNIDWKKSNRGRRLDHIWVSDNLKGAL-------FSMHLLSEARDWFSPSDHVPYF 256

Query: 300 IDYD 303
           + ++
Sbjct: 257 VTFN 260


>gi|116251927|ref|YP_767765.1| hypothetical protein RL2169 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256575|emb|CAK07661.1| hypothetical exported protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 417

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 98/344 (28%), Gaps = 73/344 (21%)

Query: 27  VSWNINTLSEQE-----GVSLWKNSVKRTTSDYTLLRQYA-KNLDADIVFLQEMGSYNAV 80
           +SWNI+ L   +     G      +          L  +    +  D++  QE+    AV
Sbjct: 79  ISWNISVLPPCDVFKTPGFDTVPVTEAAYVKRSGQLTTFIENKIAPDVIAFQEVSGEQAV 138

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             V P +       +       +           AV  +    L  S  L        + 
Sbjct: 139 RDVLPNDGADYLVCSFGSHKVQRLAFAWKKEFGPAVECEVEDALSLSSSL------AEKD 192

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLD--------SLENTYSPSCSLLSQQAQWLK 192
             R  + L + I+GK    LD+HLKS C                    C  L QQ   L+
Sbjct: 193 RVRPGLALALTIDGKLTRFLDVHLKSGCVSPFDNPPDALDGNAGDDDPCITLQQQVVPLE 252

Query: 193 DWITQKKESLVPFVIAGDFNR------------KINYLGNNDDF---------------- 224
            WI +K       V+ GDFNR            + +      +                 
Sbjct: 253 KWIERKSADTNRVVVLGDFNRNVWHETHEPGKTRTDGSDPKSELPSTVKVRKLIDEVNDG 312

Query: 225 ------WKTIDPNDSLIRFPKEKDSRCNANK--------------NLRNKIPIDYFVM-- 262
                    +D    +     E   R  + K                RN + +D+ ++  
Sbjct: 313 APEGSKLTLLDEACPINTASDEACKRLKSAKMSDDEKLLKRSENLGCRNPVGLDHIMIGA 372

Query: 263 ---DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +  + +        L    +  +    LSDHCP++    
Sbjct: 373 GFSSPHPAEKVALGRQGRTLSASAEHPNPLLSLSDHCPLTAVVS 416


>gi|325954373|ref|YP_004238033.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
 gi|323436991|gb|ADX67455.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
          Length = 320

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 78/298 (26%), Gaps = 63/298 (21%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           ++L   F+      + +   ++ S NI                    SD   L Q+    
Sbjct: 83  FMLIRPFYFGENAKTESPNYKVASVNIY----------------SQNSDVYTLMQFINKE 126

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            AD+V LQE+ +         +  +  ++   R  N             IA+  +     
Sbjct: 127 KADLVLLQEVTTKWQNNLDNLRTLYPYYHEEVRDNN-----------FGIALYSRYPIDS 175

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
                 +  +           +   + +  KKI VL  H        +            
Sbjct: 176 LVVKNYIDDRHPS--------LWATISVGEKKIQVLGTHPVPPLPNQARFEK-------R 220

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           + Q + +K  I   +      ++ GD N  +     N      +                
Sbjct: 221 NLQLELMKKDIE--ESDHENILLVGDLNCTLFSPNINKIKNDKLKDARL-----GFGFQN 273

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    +  ID+  + +N              +   D        SDH PI  + 
Sbjct: 274 SWNAFVPIFRTNIDHIWVSKN---------IKVTNFYRGDFIE-----SDHFPIIAEL 317


>gi|183979969|ref|NP_001038753.2| 2'-phosphodiesterase [Danio rerio]
          Length = 591

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 87/322 (27%), Gaps = 37/322 (11%)

Query: 19  SVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +    +R+VS+NI         LS+            +      L+++     +ADI+ L
Sbjct: 266 TDEGSLRVVSYNILADVYAQTDLSKTVLYPYCAPYALQMDYRQNLIKKELSGYNADIICL 325

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           QE+     V  + P           R+    H    +         V + +V + +    
Sbjct: 326 QEVDKCVFVDLLCPALDAFGLDGVFRIKEKQHEGLATYFRRSKLKLVEQYDVMLSEALTT 385

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLL 184
               +  + +     +++  +E     + V  +          C  ++         ++ 
Sbjct: 386 DPIHRQLWEKVSCSPSLKEKIEKRSTTLQVTVLQSLCDPSRILCVGNTHLYWRPEGGNVR 445

Query: 185 SQQAQWLKDWITQKKESLVP---FVIAGDFNRKINY------------LGNNDD------ 223
             Q     + + Q      P    + +GDFN   +               + D       
Sbjct: 446 LVQIAVALEHMKQVVTEKHPGARLIFSGDFNSTPSSGLFQLLSQGCIPEDHEDWGSGGPE 505

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNE 282
               +   +               N     +  +DY  ++        +    S    + 
Sbjct: 506 EQIRLGLTNPFQLSSACGVPDF-TNFVGGFQGCLDYIFVEPRTLQVEQVIPLPSLEEVSN 564

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
                     SDH  +  D  +
Sbjct: 565 CVALPSISHPSDHIALVCDLKW 586


>gi|196040092|ref|ZP_03107394.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus NVH0597-99]
 gi|196028947|gb|EDX67552.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus NVH0597-99]
          Length = 263

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 243 FNGTNRKI---------ISDHFGVEVQVD 262


>gi|148692768|gb|EDL24715.1| RIKEN cDNA E430028B21 [Mus musculus]
          Length = 575

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 81/314 (25%), Gaps = 33/314 (10%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 261 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 320

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + P           R+  H    +        +  +             L  + 
Sbjct: 321 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 380

Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189
               A N  A E +++ +   +I VL     S    C  ++    +     +   Q    
Sbjct: 381 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMAVA 440

Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236
                 +++     +P +  GDFN   +               + D      +   S+  
Sbjct: 441 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 500

Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290
               K           N        +DY  +D        +    S              
Sbjct: 501 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 560

Query: 291 RLSDHCPISIDYDF 304
             SDH  +  D  +
Sbjct: 561 HPSDHIALVCDLKW 574


>gi|134024958|gb|AAI34884.1| Zgc:136374 protein [Danio rerio]
          Length = 579

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 87/322 (27%), Gaps = 37/322 (11%)

Query: 19  SVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +    +R+VS+NI         LS+            +      L+++     +ADI+ L
Sbjct: 254 TDEGSLRVVSYNILADVYAQTDLSKTVLYPYCAPYALQMDYRQNLIKKELSGYNADIICL 313

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           QE+     V  + P           R+    H    +         V + +V + +    
Sbjct: 314 QEVDKCVFVDLLCPALDAFGLDGVFRIKEKQHEGLATYFRRSKLKLVEQYDVMLSEALTT 373

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLL 184
               +  + +     +++  +E     + V  +          C  ++         ++ 
Sbjct: 374 DPIHRQLWEKVSCSPSLKEKIEKRSTTLQVTVLQSLCDPSRILCVGNTHLYWRPEGGNVR 433

Query: 185 SQQAQWLKDWITQKKESLVP---FVIAGDFNRKINY------------LGNNDD------ 223
             Q     + + Q      P    + +GDFN   +               + D       
Sbjct: 434 LVQIAVALEHMKQVVTEKHPGARLIFSGDFNSTPSSGLFQLLSQGCIPEDHEDWGSGGPE 493

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNE 282
               +   +               N     +  +DY  ++        +    S    + 
Sbjct: 494 EQIRLGLTNPFQLSSACGVPDF-TNFVGGFQGCLDYIFVEPRTLQVEQVIPLPSLEEVSN 552

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
                     SDH  +  D  +
Sbjct: 553 CVALPSISHPSDHIALVCDLKW 574


>gi|26353952|dbj|BAC40606.1| unnamed protein product [Mus musculus]
 gi|74196280|dbj|BAE33039.1| unnamed protein product [Mus musculus]
          Length = 608

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 81/314 (25%), Gaps = 33/314 (10%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + P           R+  H    +        +  +             L  + 
Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413

Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189
               A N  A E +++ +   +I VL     S    C  ++    +     +   Q    
Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMAVA 473

Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236
                 +++     +P +  GDFN   +               + D      +   S+  
Sbjct: 474 LVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPL 533

Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290
               K           N        +DY  +D        +    S              
Sbjct: 534 SHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 593

Query: 291 RLSDHCPISIDYDF 304
             SDH  +  D  +
Sbjct: 594 HPSDHIALVCDLKW 607


>gi|52144875|ref|YP_081954.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus E33L]
 gi|51978344|gb|AAU19894.1| possible endonuclease/exonuclease/phosphatase family protein
           [Bacillus cereus E33L]
          Length = 263

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKKDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNI---------ISDHFGVEVQVD 262


>gi|46395493|ref|NP_996840.1| deoxyribonuclease-1 precursor [Gallus gallus]
 gi|14194703|sp|Q9YGI5|DNAS1_CHICK RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease
           I; Short=DNase I; Flags: Precursor
 gi|4107168|emb|CAA10503.1| deoxyribonuclease I [Gallus gallus]
          Length = 282

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 79/284 (27%), Gaps = 32/284 (11%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVA 81
           R+ ++NI T           +S     +    +         DI  +QE+   +      
Sbjct: 22  RISAFNIRTFG---------DSKMSNQTVAGFIVSILVQY--DITLVQEVRDADLSSVKK 70

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V   N+   +  +        R+S  + +     R   V VL+  Y   G +   +   
Sbjct: 71  LVSQLNSASSYPYSFLSSIPLGRNSYKEQYV-FIYRSDIVSVLESYYYDDGCESCGTDIF 129

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R    +       ++    I         +         + ++       D I + + +
Sbjct: 130 SREPFIVKFSSPTTQLDEFVIVPLHAEPSSAP--------AEINALTDVYTDVINKWETN 181

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
                  GDFN   +Y+         +    S      +       + +       D  V
Sbjct: 182 N--IFFMGDFNADCSYVTAEQWPSIRLRSLSSCEWLIPDSADTTVTSTDCAY----DRIV 235

Query: 262 M-DQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302
                  + +   S +   + E           +SDH P+ +  
Sbjct: 236 ACGSALRQAVEYGSATVNNFQETLRIQNKDALAISDHFPVEVTL 279


>gi|319781720|ref|YP_004141196.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167608|gb|ADV11146.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 282

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 80/276 (28%), Gaps = 53/276 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + S+N++     +              D     +  + +D D++ LQE  +         
Sbjct: 39  VASYNVHKCIGVDRKF-----------DPDRTIRVIREIDPDVIALQEADNRFGDRDGLL 87

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   +    +  S     +  H  + + KK V        L G          R A
Sbjct: 88  DLPRLERETGLVPVPISATGKGHGWHGNVLLFKKGVVRDVHQIKLPGL-------EPRGA 140

Query: 146 VELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           V   ++++G + + ++  HL                    SQQA+ + D +        P
Sbjct: 141 VVAEIDLDGSRTLRIIAAHLGLL-------------RRSRSQQARVVLDLMN--SPDERP 185

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GD N         +         ++L      +        +    + +D  + ++
Sbjct: 186 TLLLGDLN---------EWRLGNRSALNTLHATFGPQPPAVPTFPSNLPLLALDRIMANR 236

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +     I                  +  SDH P++ 
Sbjct: 237 HGMIAAIDA----------HDTPLSRVASDHLPLTA 262


>gi|116496201|ref|YP_807935.1| metal-dependent hydrolase [Lactobacillus casei ATCC 334]
 gi|116106351|gb|ABJ71493.1| Metal-dependent hydrolase [Lactobacillus casei ATCC 334]
          Length = 355

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 89/324 (27%), Gaps = 65/324 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            Q    +++NI               G      S K   +    + +  +  + D+ F Q
Sbjct: 52  GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRAYSKKSVRTSINGVIKTTQAQNPDVAFYQ 111

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTER-----------LINHSKRDSNNDIHTAIAVRKKNV 121
           E+      ++   +         +             + +          + I    K  
Sbjct: 112 EIDPDGDRSQHVNEVKMVTGAQQQYANIYGQNYDSAYLFYPFTQPIGKAKSGILTLSKAK 171

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP 179
               + Y L    D        RA         NGK+  +++IH+ +F            
Sbjct: 172 VDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAFTPN--------- 222

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              +   Q   L  +I Q  +     ++AGD+N ++          K +D   + +    
Sbjct: 223 -VKIQQAQFTKLFKYIEQAYKQGNYVMVAGDYNHRLLKDTAEIFHTKDLDETWTHLFPKS 281

Query: 240 EKDSRCN--------------------ANKNLRNKIPID-YFVMDQNAYKFLIQESFSEI 278
           +  +  +                              ID Y +   N    +  ES   +
Sbjct: 282 KLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYIL-SPN----IKAESVHVV 336

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
                     G + SDH P+ + +
Sbjct: 337 ST--------GFQYSDHNPVVLKF 352


>gi|225869981|ref|YP_002745928.1| exodeoxyribonuclease [Streptococcus equi subsp. equi 4047]
 gi|225699385|emb|CAW92824.1| exodeoxyribonuclease [Streptococcus equi subsp. equi 4047]
          Length = 275

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +   ++     +  S  +     +       K       ++P +GA  +    G  
Sbjct: 55  KHLESLLGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        ++  
Sbjct: 114 -----IITLEFNDFFVTQVYTPNAGDGLRRLEERQLWDQKYADYLAQL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 SWWAQRSKTSKLNNTGWRIDYWLTSNRLIDKVSRSEMISSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 LLEID 274


>gi|182419446|ref|ZP_02950698.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum 5521]
 gi|237666690|ref|ZP_04526675.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376777|gb|EDT74349.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum 5521]
 gi|237657889|gb|EEP55444.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 265

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 43/272 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFY---------STERLI 99
                L +     + D++ LQE+        +  +  ++ + +           S     
Sbjct: 18  DKIKYLAKVISEKNYDVIALQEVSQSIDCKIIDGILKEDNFIVLLKEELNKFTKSNYEFY 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  ++  +  +S+ +  + D       R+ ++  +EIN K++  
Sbjct: 78  WDFSHIGYDIYEEGLAIMTRHKFINSESFFITKSMDRTYWK-TRKIIKSSIEINNKEVDF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            +       + QA  L D +  KK +    +  GDFN       
Sbjct: 137 YSCHLGW----------WKDDEEPFTYQADKLLDTVNSKKTA----IFMGDFNNNAFVRN 182

Query: 220 NNDDFW--KTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQ 272
              D+   K ++          E+ S     K            +D  +   N       
Sbjct: 183 EGYDYLINKNLNDLYLKTDKSDEECSATVKGKIDGWDENKEKLRLDLIL-SNNLL----- 236

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            + +SDH  + ++ DF
Sbjct: 237 ---KVKNARVIFNGINKEIISDHYGVELEIDF 265


>gi|6681456|dbj|BAA88714.1| Deoxyribonuclease I [Gallus gallus]
          Length = 283

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 79/285 (27%), Gaps = 34/285 (11%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVA 81
           R+ ++NI T           +S     +    +         DI  +QE+   +      
Sbjct: 23  RISAFNIRTFG---------DSKMSNQTVAGFIVSILVQY--DITLVQEVRDADLSSVKK 71

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V   N+   +  +        R+S  + +     R   V VL+  Y   G +   +   
Sbjct: 72  LVSQLNSASSYPYSFLSSIPLGRNSYKEQYV-FIYRSDIVSVLESYYYDDGCESCGTDIF 130

Query: 142 NRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           +R    +       ++   + + L +       E                  D I + + 
Sbjct: 131 SREPFIVKFSSPTTQLDEFVIVPLHAEPACAPAEINALTDVYT---------DVINKWET 181

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           +       GDFN   +Y+         +    S      +       + +       D  
Sbjct: 182 NN--IFFMGDFNADCSYVTAEQWPSIRLRSLSSCEWLIPDSADTTVTSTDCAY----DRI 235

Query: 261 VM-DQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDY 302
           V       + +   S +   + E           +SDH P+ +  
Sbjct: 236 VACGSALRQAVEYGSATVDNFQETLHIQNKDALAISDHFPVEVTL 280


>gi|324324468|gb|ADY19728.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 263

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNV---------ISDHFGVEVQVD 262


>gi|91774073|ref|YP_566765.1| exodeoxyribonuclease III [Methanococcoides burtonii DSM 6242]
 gi|91713088|gb|ABE53015.1| Exodeoxyribonuclease III [Methanococcoides burtonii DSM 6242]
          Length = 251

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/271 (10%), Positives = 70/271 (25%), Gaps = 62/271 (22%)

Query: 58  RQYAKNLDADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            ++ +    DI+ LQE  +       ++   + +  ++ +     +          + + 
Sbjct: 13  VEWMEATQPDILCLQETKATETQLPKELRHIHGYVPYFFSAERKGY----------SGVG 62

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  K   V  +    +   D   R          + +  +   + +I+  +    D    
Sbjct: 63  IYTKVPPVEVKYGLGVPRFDKEGR---------TLIVEFEDFALFNIYFPNGKASDER-- 111

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------------- 219
                            +     K++    +I GD N     +                 
Sbjct: 112 -----LEYKMDFYNAFMEVADSMKDAGKNVIICGDVNTAHKEIDLARPKQNERSSGFLPQ 166

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQ 272
             +     +           E +S      +++ +         IDYF    +    +  
Sbjct: 167 EREWIDTFLGHGYLDTLRMFEPESGNYTWWDMKTRARDRNVGWRIDYFFASVSLKDRIRS 226

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                               SDHCPI I+ +
Sbjct: 227 A-----------YILSDVMGSDHCPIGIEVE 246


>gi|312868313|ref|ZP_07728513.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           parasanguinis F0405]
 gi|311096058|gb|EFQ54302.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           parasanguinis F0405]
          Length = 270

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 73/280 (26%), Gaps = 54/280 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              +  L++       D++  QE+    +   V     +    S                
Sbjct: 17  QQKFETLKEQILEAKYDVICFQEVNQEMSSEAVETDEFYQALPSAVAIHKDHFVRVLVEE 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              + ++  +A+  +    L+    L+   D  +    RR    
Sbjct: 77  LAAQGLHYYWTWAYNHIGYDHLNEGVAILSRQP--LKADEILVSNMDDPTDYHTRRVAVA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK+I V  +HL    + D       P       Q                PF++A
Sbjct: 135 HTSVDGKEIAVASVHL---SWWDKGFQFEWPRIEKYFSQV-------------GKPFILA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYFVMD 263
           GDFN      G        ++  DS I               +   + +  + IDY    
Sbjct: 179 GDFNNPAGQEGYETILSSPLELQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYVFAS 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +     +          +SDH  +  +  
Sbjct: 239 PE---------WDIQRLHVIFDGQNKSHVSDHYGLEAELS 269


>gi|184199933|ref|YP_001854140.1| hypothetical protein KRH_02870 [Kocuria rhizophila DC2201]
 gi|183580163|dbj|BAG28634.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 636

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 44/351 (12%), Positives = 89/351 (25%), Gaps = 74/351 (21%)

Query: 17  TASVAQKVRLVSWNINT---------------LSEQEGVSLWKNSVKRTTSDYTLL---- 57
           T  V  +V + S+N+                  S     ++ +    R   D   L    
Sbjct: 291 TPRVGGQVSVASFNVLNYFTTTGQQKKCKGGNFSTDGTYNVAQGCDVRGAYDAADLQRQQ 350

Query: 58  ---RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN------- 107
                    L+A +V L E+ +   + +   +    +  +      + K           
Sbjct: 351 AKTVAAINQLNASVVGLMEIENSAKLGEEPDEALATLVSALNGAAGYEKWAIAPVDASQL 410

Query: 108 ------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN-RRAVELLVEIN------- 153
                 + I  AI  +     ++ ++  L     +     N R  +              
Sbjct: 411 QPVADQDVITNAIIYQPAEASLMGEAQALGAEAGAGGAFENARTPLAASFTATRGKGRGT 470

Query: 154 GKKIWVLDIHLKSFCFLD------SLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPF 205
              I V+  H KS              +      +    QA+ L DWI +  +       
Sbjct: 471 NAPITVVVNHFKSKGSGPKNGPNADAGDGQGAWNAARVAQAEALVDWIPELADRAGSADV 530

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
            + GDFN           +            F     +  +   +      +D+ ++ ++
Sbjct: 531 ALLGDFNSYTQEDPMQVFYSAG---------FASAPAADEHTYVHGGQVGSLDHLLVSRS 581

Query: 266 AYKFLIQESFSEIL--------------YNEDDIKSRGKRLSDHCPISIDY 302
             +         I                  D  +      SDH P    +
Sbjct: 582 LQQRTTGADVWNINSGQSPLLQYAQYRTTALDYYRPDAAASSDHDPAIAGF 632


>gi|109130906|ref|XP_001092143.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Macaca
           mulatta]
          Length = 518

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 77/331 (23%), Gaps = 71/331 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         +            + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPVQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +      A  V               +    G  D 
Sbjct: 59  PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGNVGCYGNMDE 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184
           F++   R                  E   + + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKERILTLINVYCPHADPGRPERLVFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
             +A+ L         +    +I GD N                             +  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSN 231

Query: 231 NDSLIRFPKEKDSRCN------------------ANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                               ++L     +DY + D+        
Sbjct: 232 LGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTL------ 285

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                I              SDHCP+     
Sbjct: 286 ----VIDTFRASFLLPEVMGSDHCPVGAVLS 312


>gi|126738233|ref|ZP_01753954.1| hypothetical protein RSK20926_06852 [Roseobacter sp. SK209-2-6]
 gi|126720730|gb|EBA17435.1| hypothetical protein RSK20926_06852 [Roseobacter sp. SK209-2-6]
          Length = 357

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/350 (12%), Positives = 92/350 (26%), Gaps = 60/350 (17%)

Query: 6   VLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +L L+  +   + + A + VR+ ++N    S +    L ++  + T      + Q  + +
Sbjct: 12  LLFLLGLIQSPSPAGAGEGVRIATYNTE-FSRRGPGLLLRDIERGTDPQVKAVLQVIQEI 70

Query: 65  DADIVFLQ------EMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-------------- 104
             DI+ LQ      E+ +  A+ +          +      N   R              
Sbjct: 71  QPDILLLQGVDWDFELRALKALERKLSLAGHPYPHLFMAQPNRGMRTGLDLDGDGLLNGP 130

Query: 105 -----DSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAG-------- 141
                 +       IA+  +             +L +  P                    
Sbjct: 131 GDAQGYARFTGKGGIALLSRLPIANAGVTDLSTLLWKDLPGASLPKGKDGTEYFSKEALD 190

Query: 142 -NRRAVELLV-----EINGKKIWVLDIHLKSFCFLDSLENTY-SPSCSLLSQQAQWLKDW 194
             R A            NG+ + +L     +  F    +         +   Q       
Sbjct: 191 ILRLATTAHWVIPINLTNGQVLQLLCFQAGTPLFDGVEDRNGLRNRDEIRLWQVFLDGAL 250

Query: 195 ITQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR- 252
                     FV+ G  N       G        ++ +      P+ +       +  + 
Sbjct: 251 PGLPSPPDSQFVLLGGANLDPRRGQGYRSAMRDLLEDSRLQDPAPQGEGGGSETVEWAKA 310

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ + Y +  ++    L       +     D +    R S H  I  D 
Sbjct: 311 GRMRVSYLLPSRDLTV-LDAGVLWPL-----DPEHPANRASRHRLIWADI 354


>gi|118476126|ref|YP_893277.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis str. Al Hakam]
 gi|118415351|gb|ABK83770.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis str. Al Hakam]
          Length = 267

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 22  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 81

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 82  WDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWK-TRKIVSATIAYNGKNITF 140

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 141 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 186

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 187 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 246

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 247 FNGTNRKV---------ISDHFGVEVQVD 266


>gi|329910713|ref|ZP_08275356.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480]
 gi|327546113|gb|EGF31174.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480]
          Length = 256

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 74/271 (27%), Gaps = 63/271 (23%)

Query: 59  QYAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++    DAD + +QE+ +  A    ++     +  ++       +S     +        
Sbjct: 22  EWMAKQDADFICVQELKAQAADMSPEMLAPEGYHGYFHYAEKKGYSGTGVYSKR------ 75

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                        + G       A  R      V+ +   + ++ ++  S    +  +  
Sbjct: 76  --------VPDQVITGFGTPEFDAEGRY-----VQCDYGNLSIVSVYCPSGSSGEERQLA 122

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNN 221
                 +       L       K S    VI GD+N                    L   
Sbjct: 123 KFRFMDVFLPHLAAL-------KASGREVVICGDWNIAHQEIDLKNWKGNKKNSGFLPEE 175

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
             +   +    +L+   +  D R        N+           IDY +           
Sbjct: 176 RAWLSRLFDEVALVDVFRRVDERAEQYTWWSNRGQAWANNVGWRIDYQIATPGIAATAKA 235

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +             + +R SDH P++I+YD
Sbjct: 236 VAI-----------YKDERFSDHAPLTIEYD 255


>gi|34499702|ref|NP_903917.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472]
 gi|34105553|gb|AAQ61907.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472]
          Length = 258

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 84/305 (27%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           +R+VS N+N +   +    +                +   +DAD V +QE+ +       
Sbjct: 2   LRIVSANLNGIRSADKKGFF---------------DWLAGIDADFVCVQELKAQAGDLSE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++   +    ++       +S             V               G    +  A 
Sbjct: 47  RMRNPDGLAGYFHYAEKKGYSGVGLYTRHQPDAVV--------------EGLGVDWIDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      ++++  K+ V+ ++L S    D  +        +     + L+         
Sbjct: 93  GRF-----LQLDFGKLSVVSLYLPSGSSSDERQQVKFDFLDVFMPHLEKLRA-------E 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246
               VI GD+N   N +   +                    +          +       
Sbjct: 141 GRDIVICGDWNIAHNEIDLKNWKGNLKNSGFLPEERAWMTDLLGRVGWRDVWRNLYPEAP 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++  +  +     S             + ++ SDH P
Sbjct: 201 GYTWWSNRGQAYAKDVGWRIDYQIVTPSLMELAESASV-----------YKDEKFSDHAP 249

Query: 298 ISIDY 302
           + +DY
Sbjct: 250 LIVDY 254


>gi|307945480|ref|ZP_07660816.1| endonuclease/exonuclease/phosphatase [Roseibium sp. TrichSKD4]
 gi|307771353|gb|EFO30578.1| endonuclease/exonuclease/phosphatase [Roseibium sp. TrichSKD4]
          Length = 347

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 87/344 (25%), Gaps = 72/344 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKR-------------TTSDYTLLRQYAKNLD----ADI 68
           L  WN+  L   E      + VK+                    L    + ++     DI
Sbjct: 6   LAFWNLENLFGPENHPHRLDWVKKDIASDLVGWTQALYDKKLAQLASIIRQMNDGAGPDI 65

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + + E    + +  +       +      +I  +   S   I TA    K    V +   
Sbjct: 66  LGVCEAEDEHVLKDLINTLAPSLPNRNYSVIAETNDLSYRGIDTAFIYDKGRFSVDEA-- 123

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-----FCFLDSLENTYSPSCSL 183
            L+       R G R  +++  + N  +  ++ +             ++     + +   
Sbjct: 124 -LVFNHRVMRRTGTRDILQVTFKTNQGRRELVAMANHWPSRYGGAGPEASAGFRATAGET 182

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           LS     + +     K+   P +  GD N          +   T +  D       +  +
Sbjct: 183 LSYWHSRIFE--EATKKDRTPVIAFGDMNDDPWDRSLTVNALATRERGDVERARSPKFYN 240

Query: 244 RCNAN-------------------KNLRNKIPIDYFVMDQNAYK-------FLIQESFSE 277
                                       N    D+ ++++             +  S   
Sbjct: 241 LAWEYLVTPAIDHKGNSRMLEGTLYYNYNGNIFDHLLVNRPLVDANPDSEFKYVDGSGGI 300

Query: 278 ILYNEDDIKSRGKRL-------------------SDHCPISIDY 302
           I + E      G                      SDH P+ +  
Sbjct: 301 IAFPEMVSHRTGDGPIRFGLPEGDAASNVNEAGYSDHFPVGLKI 344


>gi|302564774|ref|NP_001181848.1| deoxyribonuclease-1-like 1 [Macaca mulatta]
          Length = 302

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 74/301 (24%), Gaps = 40/301 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++    S AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILV---SGAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F ++      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLRELNRFDASGPYSTLSSPQLGRSTYVETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181
                     +       R        +       + ++ +H         L   Y    
Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSDVLPSLVLVPLHTTPKAVEKELNALYHVFL 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +  Q                   ++ GDFN     L         +           + 
Sbjct: 167 EVSQQW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +              I   +  +     L   +  +        +     +SDH P+ ++
Sbjct: 214 EDTTVRASTHCAYDRI--VLHGERCRSLLHTAAAFDFPTTFQLTEEEALNISDHYPVEVE 271

Query: 302 Y 302
            
Sbjct: 272 L 272


>gi|256078810|ref|XP_002575687.1| hypothetical protein [Schistosoma mansoni]
 gi|238660930|emb|CAZ31920.1| expressed protein [Schistosoma mansoni]
          Length = 425

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 97/322 (30%), Gaps = 51/322 (15%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +P  +S+ + +R+ SWN+N  +  +                 ++      ++  ++ LQE
Sbjct: 119 LPRISSIERHIRIGSWNLNRFNLSKAEHPGF---------MEVVCLTILRMNVSLILLQE 169

Query: 74  MGSYNAVAKVFPKNTWCI-----------------FYSTERLINHSKRDSNNDIHTAIAV 116
           +   +    +  +  +                   ++     I  +        +     
Sbjct: 170 VSDPSVADYLCNELNYPSLPHIKRWVEKFPLSIPPYWKASCSIQPTGSMFRAKEYAVFLY 229

Query: 117 RKKNVRVLQQSYPLLGAKDS---FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             +    + ++  L  + +S     ++  R        I    + ++ +HLK+    +S 
Sbjct: 230 NSRCGIRISRTSLLEKSSNSLSVSRKSFTRSPCGASCHIQHVNLVLISVHLKASGLRNSQ 289

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                     L      L     + + S    +IAGDFN    +        + +  +  
Sbjct: 290 IGRTISEIESLGY----LVQAFYETQPSGTYLIIAGDFNLSSTHEAY-----RVLHEHGL 340

Query: 234 LIRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAY------------KFLIQESFSEILY 280
                 E+ +  N  K+  N +   D   +  N                +I +     L 
Sbjct: 341 WPVLKGEQQTTTNHCKSGSNHLRAYDNAWLSANLSLTSESTIRWTGDSGVILKGLRHPLI 400

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
            E+        +SDH PI  D 
Sbjct: 401 PEETGSGANGLVSDHAPIWFDI 422


>gi|306829996|ref|ZP_07463183.1| exodeoxyribonuclease III [Streptococcus mitis ATCC 6249]
 gi|304428007|gb|EFM31100.1| exodeoxyribonuclease III [Streptococcus mitis ATCC 6249]
          Length = 275

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       ++P +GA  S      R
Sbjct: 55  KHLEVLEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTITFPEIGAP-STMDVEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +        +      +  ++    L            
Sbjct: 114 I-----ITLEFDDFFVTQVYTPNAGDGLKRLDDRQVWDAKYAEYLATLDQ--------QK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNHRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMINSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VMEIE 274


>gi|229170375|ref|ZP_04298048.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
 gi|228613072|gb|EEK70224.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
          Length = 263

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 74/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102
                L +  +  D D++ LQE+        V        F         +         
Sbjct: 18  EKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNII 77

Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + +  +   KD+      R+ V   +  N K I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIVKEDTLFVSENKDTTYWK-TRKIVSATIAYNDKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q+      +  
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLILSNQSKTVNSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNV---------ISDHFGVEVQLD 262


>gi|65317801|ref|ZP_00390760.1| COG3568: Metal-dependent hydrolase [Bacillus anthracis str. A2012]
          Length = 263

 Score = 72.7 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D+V LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVVALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++    L   Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEELFKGQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 243 FNGTNRKI---------ISDHFGVEVXVD 262


>gi|82701358|ref|YP_410924.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196]
 gi|82409423|gb|ABB73532.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196]
          Length = 259

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 87/307 (28%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           +R+++ N+N +        +               ++    DADIV +QE+ +   +   
Sbjct: 1   MRIITLNLNGIRSAANKGFF---------------RWLPLQDADIVCVQELKAQVGDITG 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V   + +  ++       +S                          P + A+  +    
Sbjct: 46  EVVSPDGYHGYFHCAEKRGYSGVGIYTRQKPG-------GVTEGLGVPEIDAEGRY---- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   + ++  ++ ++ I+  S    +  +       ++     +     + +    
Sbjct: 95  --------LRVDFGQLSIISIYFPSGSAGEHRQ-------AVKYFFMEQFFPMLEKLAAC 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD+N     +   +                +   +      +   +  +   +
Sbjct: 140 GSEIILCGDWNIAHKEIDLRNWRSNQKNSGFLPQERAWLTDVFQELGFVDVFRRINPEPD 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             + +R SDH P
Sbjct: 200 QYTWWSNRGQAWAKNVGWRIDYQIATPGIAGKANAVSI-----------YKTERFSDHSP 248

Query: 298 ISIDYDF 304
           + IDYD+
Sbjct: 249 LIIDYDY 255


>gi|225690560|ref|NP_998318.2| deoxyribonuclease I-like 3 [Danio rerio]
          Length = 317

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 91/310 (29%), Gaps = 40/310 (12%)

Query: 2   IRKYVLALVFF--LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           IR+ +L++     L+ C        R+ ++N+ +           +S          + +
Sbjct: 5   IRRILLSIFLLSGLLTC-----YGFRICAFNVQSFG---------DSKSADAKIMNSISR 50

Query: 60  YAKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                  DI  LQE+      A+ ++            + + +     +       +   
Sbjct: 51  IVARC--DICLLQEVRDQKNKAIPRLLEAVNKIGDNDFQYVASERLGRTQTYQEQYVFFY 108

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLE 174
           +K+  +L+  Y     +     A +R    +  +      K+  ++  H         ++
Sbjct: 109 RKSTAILKGQYQYPDTQTGDIDAFSREPFVVYFQAPKTLAKEFVLIPQHTTPSNATKEID 168

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  +                   +  GDFN    Y+   +     +  + S 
Sbjct: 169 ELYDVFVDVKVRW-------------ETENVMFLGDFNAACGYVAKKNRKNIRLYTDPSF 215

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-- 292
               ++                I   V  +   + +   S     + ++ + +  + L  
Sbjct: 216 TWLIQDNVDTTVKESTDCAYDRI--VVHGEPFLRSIKPFSAQPFNFPKEFLLTEAQALEV 273

Query: 293 SDHCPISIDY 302
           SDH PI +  
Sbjct: 274 SDHYPIEVVL 283


>gi|254251096|ref|ZP_04944414.1| Exonuclease III [Burkholderia dolosa AUO158]
 gi|124893705|gb|EAY67585.1| Exonuclease III [Burkholderia dolosa AUO158]
          Length = 257

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 83/305 (27%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +    +AD V +QE+       KV
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------DWLGQQNADCVCVQEI-------KV 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F     L ++    +      A    ++          ++G   S      R
Sbjct: 40  SADDLPAEFVEPHGLRSYFHHAAKKGYSGAGLYSRREP-----DDVIIGFGSSEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ ++ +++ S    D  +                L        +   
Sbjct: 95  Y-----VEARYGKLSIVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KKKR 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +  +   +   +  D R    
Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDDVGYVDVFRTLDPRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +            S             +  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAATAKSTSI-----------FKDIKFSDHAPLT 250

Query: 300 IDYDF 304
           +DYD+
Sbjct: 251 VDYDY 255


>gi|313232077|emb|CBY09188.1| unnamed protein product [Oikopleura dioica]
          Length = 392

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 82/309 (26%), Gaps = 70/309 (22%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A   R+V+WN+  L                        +  K LD DI+ LQE      
Sbjct: 127 QAGMFRIVTWNVAGLYACIKKDFC---------------KAVKTLDCDILCLQETK---- 167

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           ++   P          E    +         ++  A+  K+  +  Q        D F R
Sbjct: 168 LSLKKPPPAEIAEQLKEWKYRNYANSEGKAGYSGTAILSKSKPISVQRGIGKTKHDDFGR 227

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           +          E   K   V      S   L +L+   +   S L      L        
Sbjct: 228 SCT-----AEFE---KFFLVTSYVPNSGRGLVNLDYRTNEWESDLRNYLTKLNK------ 273

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF----------------WKTIDPNDSLIRFPKEKDS 243
               P +  GD N     +   +D                  + +     +  + K   +
Sbjct: 274 --DKPVIYCGDLNVAHTAIDLKNDKSNYNKSAGYTQAEIDELEKLLELGYVDAYRKLYPA 331

Query: 244 RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             +                   +DYF+M       +           ED +     + SD
Sbjct: 332 EEDCYTFWSYMGGARSKNVGWRLDYFLM------KIKDCEEWI----EDVVVHSKVQGSD 381

Query: 295 HCPISIDYD 303
           HCP+ I  +
Sbjct: 382 HCPVEIKLN 390


>gi|291514133|emb|CBK63343.1| Exonuclease III [Alistipes shahii WAL 8301]
          Length = 297

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/334 (11%), Positives = 93/334 (27%), Gaps = 78/334 (23%)

Query: 2   IRKYVLALVF------FLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           I+K   A++         V C   S  + ++++ +NI     ++           TT   
Sbjct: 4   IQKLTAAILLTASCAGLSVSCVPRSETKNLKIICYNILYGMRRD-----------TTQGK 52

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            L  ++ +  + DI+ LQE+  +     +         +    +          +     
Sbjct: 53  RLFAEWVRQQNPDILALQEVNDFTQFTLETLAAEYGHDYAVISKDPKLIPGSVGSRTKFP 112

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           +++  K+  V                        +  ++ G  + VL ++   +      
Sbjct: 113 VSISSKSPVVNVDKVLDNMWHG-----------FIKCKVEGYNVIVLHLNPHLY------ 155

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFW------ 225
                       ++ + + + + Q       ++I GDFN    ++     D  +      
Sbjct: 156 --------EARRREIRTVLETVKQ-SGLFEKWIIMGDFNTVSPLDSAVYADGKYLQRKKE 206

Query: 226 -------KTIDPNDSLIR----------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                      P+  L            F     +     +       ID+  +  +   
Sbjct: 207 QEKVHTRNNNLPDGQLDFAVSQAILDFGFVDAGWADRENYRKDGFTRRIDFIYVSPDLRD 266

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++   +    +            SDH P+ +  
Sbjct: 267 RIVSCRYITDDFTAAY--------SDHIPVELVL 292


>gi|190405580|gb|EDV08847.1| inositol phosphosphingolipids phospholipase C [Saccharomyces
           cerevisiae RM11-1a]
 gi|256273772|gb|EEU08697.1| Isc1p [Saccharomyces cerevisiae JAY291]
 gi|259145925|emb|CAY79185.1| Isc1p [Saccharomyces cerevisiae EC1118]
 gi|323333910|gb|EGA75299.1| Isc1p [Saccharomyces cerevisiae AWRI796]
 gi|323337923|gb|EGA79162.1| Isc1p [Saccharomyces cerevisiae Vin13]
 gi|323348959|gb|EGA83195.1| Isc1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 477

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 91/328 (27%), Gaps = 62/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61
           S A  ++ +++N   L       + K+  +R  +    L                     
Sbjct: 34  SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSTLTPISDELLPNGGDSN 88

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +N D D++ LQE+        +          S                  AI  +    
Sbjct: 89  ENEDYDVIALQEIWCVEDWKYLAS-----ACASKYPYQRLFHSGILTGPGLAILSKVPIE 143

Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 +P+     A         +     ++    + I +++ H+ +           +
Sbjct: 144 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 199

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230
                 S QA      I   +++    ++ GD N +   L +            W+ +  
Sbjct: 200 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHG 259

Query: 231 NDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275
              L    +           + C++  N     +       +DY ++D +  + +     
Sbjct: 260 KQDLAVIARLSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTVDAG-- 317

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +   + I      +SDH   S   +
Sbjct: 318 ---VRFTERIPHLDCSVSDHFAYSCTLN 342


>gi|290961878|ref|YP_003493060.1| hydrolase [Streptomyces scabiei 87.22]
 gi|260651404|emb|CBG74526.1| putative hydrolase [Streptomyces scabiei 87.22]
          Length = 489

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 70/301 (23%), Gaps = 53/301 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                +R+++WN+                 R         +      AD+V LQE     
Sbjct: 217 PDGPALRVMTWNLWHGGT------------RVRDHRAKQLEVITETGADVVGLQETYGTA 264

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A  ++     W    + + L                 +  ++    +   P +G   +  
Sbjct: 265 A-RELADALGWYHHQAGDNLG----------------IISRHPITARFGDPDVGFYGAAG 307

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R      V++    +           F             +   Q +     I   
Sbjct: 308 -VRVRTGSGAEVDVWTVHLDYKPYGPYEAAFDGLEAAELIAHEEVRLAQLRDCLRRID-- 364

Query: 199 KESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               VP V+ GDFN   +    +         +     D        P  +     +  +
Sbjct: 365 --GSVPVVLVGDFNSPSHLDRPDVDWPVTLAAETAGLRDSYREAHPDPVRQPGHTWSPIH 422

Query: 251 ---------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                       +  ID+ +        L   +                  SDH  +   
Sbjct: 423 VEHEDGSGRPEPQDRIDFVLHRG--LTVLDSRTCVSGTPRPWPDVEDNDWPSDHAAVITT 480

Query: 302 Y 302
           +
Sbjct: 481 F 481


>gi|293571332|ref|ZP_06682364.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E980]
 gi|291608597|gb|EFF37887.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E980]
          Length = 274

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 82/310 (26%), Gaps = 66/310 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++ N +  L E+                   + Q   +   D++ LQE+        
Sbjct: 1   MKIMTLNTHSWLEEEP------------QEKLKQIAQKICHEQYDVIALQEVNQTMDAKG 48

Query: 83  V----------------FPKNTWCIFY--------STERLINHSKRDSNNDIHTAIAVRK 118
           +                   + +             T                   A+  
Sbjct: 49  LTSEQLKNFSQVQEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLS 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K    L     L+           R+ +     +  + I V   H   +    S      
Sbjct: 109 KQP--LTSQTHLVSETKEKEDYHTRKILVGQTSVKTQCITVASCHFSWWVDEKSG----- 161

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                 + + + L+  +        P  + GDFN      G +      +   D+     
Sbjct: 162 -----FAFEWKELEASL---APLTTPLYLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQ 213

Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           K++         +  +N +  + IDY  + Q+ +            Y        G  +S
Sbjct: 214 KKQAEATIEKRIDGWENNKEGLRIDYIYVPQDCF---------VTSYQRIFDGENGPIVS 264

Query: 294 DHCPISIDYD 303
           DH  +++  +
Sbjct: 265 DHYGVAVTLE 274


>gi|254465689|ref|ZP_05079100.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacterales bacterium Y4I]
 gi|206686597|gb|EDZ47079.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacterales bacterium Y4I]
          Length = 234

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 69/284 (24%), Gaps = 57/284 (20%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                +R+ ++NI      +                    Q    L AD+  LQE     
Sbjct: 5   PPPDALRIATYNIQKCVGMD-----------LRRRPERTLQVLSGLGADVAVLQEADKR- 52

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              +      + +  +  + ++     S      A+  R       +    L G      
Sbjct: 53  LPPRPAALPHFLVEETGWQAVDLGGAGSLGWHGNAVLFRDSVRLRAEGHIALPGL----- 107

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R AV  L E     + V+  HL                     +Q           
Sbjct: 108 --EPRGAVWALFETEAGLVRVIGAHLGLTG-------------RARREQM---HALARAA 149

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           +      V+AGDFN       +     + I P  + +           +   LR    +D
Sbjct: 150 EADDAAVVLAGDFN-----EWSRSPVLEHIAPALTFL-------PPKASFPALRPLGALD 197

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +      +                     SDH P+  D 
Sbjct: 198 RIAHCRRLEA--VAHGVH--------GARPAHIASDHLPVWADL 231


>gi|194333003|ref|YP_002014863.1| exodeoxyribonuclease III Xth [Prosthecochloris aestuarii DSM 271]
 gi|194310821|gb|ACF45216.1| exodeoxyribonuclease III Xth [Prosthecochloris aestuarii DSM 271]
          Length = 258

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/306 (9%), Positives = 71/306 (23%), Gaps = 79/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +++ +WN+N                   +  + L  +      DI+ LQE+     +   
Sbjct: 1   MKIATWNVNG----------------IRARKSALYDWVVGTMPDILILQELKADEESIPD 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  F++                   + VR          +  +   D  +R  
Sbjct: 45  EILSLEGYSKFWNGSTFKKGYSG-------VGMLVRDDLNGNDGCYHYEIPDFDIENR-- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   V ++G+   ++  ++                        + +  +I    + 
Sbjct: 96  -------TVVLHGRGFSLIGTYVPRGEGDAHYGVK--------LNYLEGVATYIGGLLDE 140

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD N                             + +          +    R 
Sbjct: 141 GREIILTGDMNVAHTALDVHHSQNKPGAVGLRAEERSALDRQL-QLGLHDIMRERHPGRE 199

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                               ID F +       +                   ++ SDH 
Sbjct: 200 GLYTWWPYWKGARERNLGWRIDCFYLSGGLLSQVQDVVVDI-----------EEKSSDHA 248

Query: 297 PISIDY 302
           P+ +D 
Sbjct: 249 PVILDI 254


>gi|317058560|ref|ZP_07923045.1| endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R]
 gi|313684236|gb|EFS21071.1| endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R]
          Length = 269

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 92/299 (30%), Gaps = 54/299 (18%)

Query: 22  QKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +K++L++ N++  L             ++      LL +       D++ +QE+      
Sbjct: 3   KKMKLLTINVHSWL------------EEKQEEKMELLAKVIAEKRYDVIAMQEVNQKIEA 50

Query: 81  AKVFPKNTWCIFYS------------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             +  +     F                           +     IA+  ++  + ++ +
Sbjct: 51  RLLKGEIREDNFLYQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDF 110

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               +K  +S + +R+ V++ +EI GK+I     H+     ++        +        
Sbjct: 111 YCTNSKTVYSIS-SRKIVKIFLEIEGKEIEFYSCHMNLPNCIEENMEQNIQN-------- 161

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                 I +        ++ GDFN     +         + +  + +L +   +  +   
Sbjct: 162 ------ILKHSSRNCLKILMGDFNTDAFHDQSSYQKILEQGLFDSYTLSKKKDDGVTVYK 215

Query: 247 ANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 N +    +DY  + +          F+   Y           +SDH  + +  
Sbjct: 216 NISGWENSVEEKRLDYIFLTEQYEVESSYVIFNGKNYPC---------ISDHNGLEVIL 265


>gi|197334477|ref|YP_002155962.1| endonuclease/exonuclease/phosphatase [Vibrio fischeri MJ11]
 gi|197315967|gb|ACH65414.1| endonuclease/exonuclease/phosphatase [Vibrio fischeri MJ11]
          Length = 325

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 83/320 (25%), Gaps = 50/320 (15%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTL---LRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87
           +    E         ++             R     L++D++  QE+ S NA+  +  + 
Sbjct: 1   MFNFVEPPNAFYDFENILTQDEWLKKQGWFRDKITELNSDVIGFQEVFSPNALEALVNEL 60

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAV 146
            +  F + +   +       N    A A R   +      +      +       NR  V
Sbjct: 61  GYAYFCTVDEPKSEDG-YVFNSPIVAFASRYPILSAQPVIAEKEQLERFGIEFEFNRIPV 119

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--------------------LLSQ 186
              +E+    I    +           E                                
Sbjct: 120 HASIELPHLGITDCYVVHFKSQRPKEPEVNNEIDEENLSSLNQLHDEQLGSWLSTVQRGL 179

Query: 187 QAQWLKDW-ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-------- 237
           +A  L +  I Q+K++    V+ GDFN+ + +          +  +     +        
Sbjct: 180 EANILHNHIIQQRKKTSQAVVVMGDFNKPLFHDEFKGLLSHELRFDKFSSDYLALFQLKD 239

Query: 238 ----------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD--- 284
                         + R + + +      +DY ++               I Y   D   
Sbjct: 240 SWDIYSELKGTDLLEKRAHTHYHGAKGSVLDYILLSNEFDSSFSGNILEIIDYTVTDKHI 299

Query: 285 ---IKSRGKRLSDHCPISID 301
                   +  +DH  +SI 
Sbjct: 300 VNPRFDIDQFSTDHALVSIT 319


>gi|83595025|ref|YP_428777.1| exodeoxyribonuclease III xth [Rhodospirillum rubrum ATCC 11170]
 gi|83577939|gb|ABC24490.1| Exodeoxyribonuclease III xth [Rhodospirillum rubrum ATCC 11170]
          Length = 249

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/273 (9%), Positives = 62/273 (22%), Gaps = 55/273 (20%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           + +  ++   D++ LQE+ +              + +     +           +  + +
Sbjct: 1   MARLVESRAIDVLCLQEIKARPDHVPTAALAEMGLVHQALHTMP---------GYNGVGI 51

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +        +      D       R A             +  +++ +    D  +  
Sbjct: 52  FSRLPLEDSTPFDWCDRVDCRH-LRTRVA----------GFTLHCLYIPAG--GDIPDPE 98

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND-------------- 222
            +P           L DW  +  +  +P ++ GDFN         D              
Sbjct: 99  ENPRFRHKLAFFDALTDWFDRTLDPDMPAMVVGDFNVAPLETDVWDHRKMRGVVSHTPVE 158

Query: 223 --DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----------PIDYFVMDQNAYKFL 270
                        +    +              +            +D+  +       L
Sbjct: 159 VAKLGALQASGPWIDAMRRFVPPEEKLFTWWSYRAKDWRLTNRGRRLDHIWVTPALVDRL 218

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +               SDH P+ +  D
Sbjct: 219 RGLEVMDDT-------RDWTPPSDHVPVIVHID 244


>gi|317148498|ref|XP_001822371.2| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           oryzae RIB40]
          Length = 325

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 89/300 (29%), Gaps = 29/300 (9%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78
            +R+++ NI   + +      K   +R       L    +N DA  + LQE+        
Sbjct: 8   PLRILTNNIRY-ATKSPFKGEKPWEERRQPLLNQLLYNTRNQDA-FICLQEVLHDQLIDI 65

Query: 79  ---------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
                    A +    ++ W          + +   S      ++   +    V     P
Sbjct: 66  HSGLNREHSAASAEAGEDAWAYIGVGRDDGHEAGEYSPIFYRPSVWQLRHWETVWLSETP 125

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            + +K S+  A  R     +   +  +  +L ++       D    +   +  ++ ++  
Sbjct: 126 HVPSK-SWDAASIRIVTIGVFTHHTSRQTILAMNTHL---DDQGSRSRFEAAHIILRKID 181

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-AN 248
             +    + K+ +    + GD N +      +          D+       +    +   
Sbjct: 182 EYES--GEHKDVISAVFLTGDLNSEETQEAYSVLTGNESTLIDAAKAVDPVEHYGNHLTW 239

Query: 249 KNLRN----KIPIDYFVMDQNAYKFLIQES--FSEILYNE-DDIKSRGKRLSDHCPISID 301
                       IDY ++     + L      +    Y+   +    G   SDH  + +D
Sbjct: 240 TGFGYEKEDPSRIDYVLLGPRPMEVLNNGGQPWKVEGYSVLANRFDDGVFNSDHRAVVVD 299


>gi|291393905|ref|XP_002713317.1| PREDICTED: deoxyribonuclease I-like 3 [Oryctolagus cuniculus]
          Length = 307

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 88/285 (30%), Gaps = 32/285 (11%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-----A 79
           +L S+N+ +            S +       ++ +  K    DI+ L E+   N      
Sbjct: 24  KLCSFNVRSFGY---------SKRENRQAMDVIVKIIKRC--DIILLMEIKDSNNMICPT 72

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + +    N+         + +   R+   + + A   ++K V V +++Y     +   + 
Sbjct: 73  LMEKLNGNSRRGITYNYVISSRLGRNVYKEQY-AFLYKEKLVTV-KKNYLYHDYEAGDAD 130

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           A +R    +  +     +    I                 S   + +      D   +  
Sbjct: 131 AFSREPYVVWFQSPFTAVKDFVIVPLHTSP--------EASVKEIDELVDVYMDVKRRWN 182

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                F+  GDFN   +Y+         +  +   +    +++              I  
Sbjct: 183 AEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDEEDTTVKKSTSCAYDRI-- 238

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
            +  Q+  + ++ +S     + +    +  + L  SDH P+    
Sbjct: 239 VLRGQDIIRSVVPDSNGVFDFRKAYKLTEEEALDVSDHFPVEFKL 283


>gi|189234750|ref|XP_974371.2| PREDICTED: similar to GA16037-PA [Tribolium castaneum]
          Length = 562

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/347 (10%), Positives = 90/347 (25%), Gaps = 67/347 (19%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++  S   +           + +  ++  ADI+ LQE+       
Sbjct: 200 FTVMCYNVLCDKYATRQMYSYCPSWALNWDYRKKGILEEIRHYSADIINLQEVEMEQFYN 259

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
              P+     +       + +K  + ++       AI  R     ++++           
Sbjct: 260 YFLPELKQDGYAGIYSPKSRAKHMAESERKYVDGCAIFYRTSKFTLIKEHLVEFNQLAMA 319

Query: 138 SRAGNRRAVELLVEINGKKIWV----------------------LDIHLKSFCFLDSLEN 175
           +  G    +  ++  +   +                        + +      +     +
Sbjct: 320 NADGLDHMLNRVMPKDNIGLAALLQTTEAAWENTPADAPFIQQPILVCTAHIHWDPEFCD 379

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYL-------- 218
                  +LS + + + D   Q   +             V+ GDFN   +          
Sbjct: 380 VKLIQTMMLSNELKSILDKSAQALRASENVNADPNSIQLVLCGDFNSLPDSGVIEFLSTG 439

Query: 219 ------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDY 259
                              K +  +         K +           N     K  IDY
Sbjct: 440 RVSQDHKDFKDFSYKQCLEKVLSCDKPNEFTHSFKLASAYNDEIMPFTNYTFDFKGIIDY 499

Query: 260 FVMDQNA---YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +        L   S   +  N+          SDH P+ ++ +
Sbjct: 500 IFYAKQTMTPLGLLGPISSEWLTQNKVIGCPHPHVFSDHFPLLVELE 546


>gi|171060718|ref|YP_001793067.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6]
 gi|170778163|gb|ACB36302.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6]
          Length = 262

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 81/274 (29%), Gaps = 58/274 (21%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  + +  + D + +QE+ + +A              +    +      +    ++ + +
Sbjct: 19  LIPWVEAAEIDCMGVQELKAQHA--------DLTADMTVLHGMQGHFHCAEKKGYSGVGL 70

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             ++         ++G   +   A  R  VE   +   +K+ ++  +  S    D  +  
Sbjct: 71  YSRHEPSDV----VIGLGHADFDAEGRY-VEARYDTPQRKLSIISCYFPSGSSGDERQQA 125

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                 L+    + L        ++   FV+ GD N                        
Sbjct: 126 KFRFLDLIEPHLRAL--------KAGREFVLMGDVNIAHQEIDLKNWKGNLKNSGFLPEE 177

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNK---------IPIDYFVMDQNAYKFL 270
                + +     +  + + +    + A     N+           IDY +         
Sbjct: 178 RAWMTRLLGDTGLVDVYRRLRPDATDEAYTWWSNRGQARAKNVGWRIDYHLATPGLAATA 237

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            + S             + +  SDH P++IDYDF
Sbjct: 238 RETSI-----------YKAQWFSDHAPLTIDYDF 260


>gi|86130871|ref|ZP_01049470.1| exodeoxyribonuclease III (Xth) [Dokdonia donghaensis MED134]
 gi|85818282|gb|EAQ39442.1| exodeoxyribonuclease III (Xth) [Dokdonia donghaensis MED134]
          Length = 254

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 90/305 (29%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           +++VS+N+N +                         + K  D D+V LQE  +       
Sbjct: 1   MKIVSYNVNGIRAALRKDF---------------ALWLKQTDPDVVLLQETKATPDQVDV 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            VF +  +  ++ + +   +          + +AV  K        +   G   +     
Sbjct: 46  AVFEELGYEHYWFSAQKKGY----------SGVAVLTKKTP----KHIEYGTGIASMDFE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      + ++   + V+ ++L S           S       +    L+D++ + K+ 
Sbjct: 92  GRN-----IRVDFDDVSVMSMYLPSGT--------NSARLEHKLEYMDLLQDYVNELKQD 138

Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247
               VI GD+N     +  +D                W         I   +  +   + 
Sbjct: 139 KPNLVIGGDYNICHEAIDIHDPVRNKKVSGFLPVEREWIGNFMESGFIDSFRHLNKEPDN 198

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY ++ +     + +                  + SDHCP 
Sbjct: 199 YTWWSYRANARANNKGWRIDYNMVSEPLKDKISRAIIL-----------SDAKHSDHCPH 247

Query: 299 SIDYD 303
            ++ D
Sbjct: 248 MVELD 252


>gi|310779140|ref|YP_003967473.1| Endonuclease/exonuclease/phosphatase [Ilyobacter polytropus DSM
           2926]
 gi|309748463|gb|ADO83125.1| Endonuclease/exonuclease/phosphatase [Ilyobacter polytropus DSM
           2926]
          Length = 281

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 98/305 (32%), Gaps = 33/305 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +  +   L +FL+  +    +   + S+N   L   +              DY  + ++ 
Sbjct: 1   MNFFKKILTYFLISFSVFSQEAY-IASFNSLHLGWDKN------------KDYKSITEFL 47

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKN 120
                D++ LQE+   + V K+  +         +  + ++S        + A   +   
Sbjct: 48  SLF--DLIGLQEVMKKDGVKKLTAELERTTGEKWKYLISDYSVGTKRYREYYAYIWKDDK 105

Query: 121 VRVLQQS--YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           V+++ +   +     + +  R   R+      +I       +  H+              
Sbjct: 106 VKLINKRRGFYKSDNETADKREYMRKPYGADFKIGEFDFTYVLCHVVYG--------DSI 157

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                 +     +  +     E+    +I GDFN     L   DD ++ +  ++  I + 
Sbjct: 158 RERRAEAYLLDKVYTYFQDIDENEQDILIGGDFN-----LPAYDDSFRRLFSHEDQIFYG 212

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +  ++    K        D         K     S   I + + +     K +SDH P+
Sbjct: 213 IDPVNKTTIGKK-GLSNSYDNIFYSYRYTKEFTGNS-GVIDFTQGNYSEVRKSISDHLPV 270

Query: 299 SIDYD 303
            I+ D
Sbjct: 271 FIEVD 275


>gi|297820690|ref|XP_002878228.1| hypothetical protein ARALYDRAFT_907339 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324066|gb|EFH54487.1| hypothetical protein ARALYDRAFT_907339 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 602

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 91/347 (26%), Gaps = 64/347 (18%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            A    ++S+NI  +T +  +  S               L +      AD+V LQE+ S 
Sbjct: 247 SAGSFTVLSYNILSDTSASSDLYSYCPPWALSWPYRRQNLLREIVGYRADVVCLQEVQSD 306

Query: 78  NAVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +      P+   + +   Y  +     S   S  D       R +   V +       A 
Sbjct: 307 HFHEIFAPELEKHGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSHVKKYDVEFNKAA 366

Query: 135 DSFSRA-----GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT-----------YS 178
            S + A       R A+  LV+ N   I VL+    +     S +               
Sbjct: 367 QSLTDALIPQTQKRAALNRLVKDNIALIVVLEAKFGNQPTDPSGKRQLICVANTHVNVQQ 426

Query: 179 PSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
               +   Q   L   + +    + +P ++ GDFN       +       +DP    +  
Sbjct: 427 DLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTIPGSAPHTLLVMGKVDPGHPDLAV 486

Query: 238 PK-----------------------------------------EKDSRCNANKNLRNKIP 256
                                                        +     N        
Sbjct: 487 DPLNILRPHTKLTHQLPLVSAYSSFVRNGMGVGLEQHRRRIDLNTNEPLFTNCTRDFIGT 546

Query: 257 IDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            DY     +      + E   E    +D      +  S+H  +  ++
Sbjct: 547 HDYIFYTADTLMVESLLELLDEDGLRKDTALPSPEWSSNHIALLAEF 593


>gi|119585747|gb|EAW65343.1| 2'-phosphodiesterase, isoform CRA_b [Homo sapiens]
          Length = 436

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 122 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 181

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 182 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 241

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 242 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 301

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 302 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 356

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++      K           N        +DY  +D        +    S         
Sbjct: 357 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 416

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 417 LPSVSHPSDHIALVCDLKW 435


>gi|119120921|ref|NP_001073156.1| deoxyribonuclease-1-like 2 [Monodelphis domestica]
 gi|82659555|gb|ABB88875.1| deoxyribonuclease 1-like 2 [Monodelphis domestica]
          Length = 288

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 78/285 (27%), Gaps = 35/285 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
           KVR+ ++NI +           +S     +    + Q       D+  +QE+   +  AV
Sbjct: 31  KVRVGAFNIRSFG---------DSKVADPACGNYIAQILAEY--DVTLVQEVRDPDLSAV 79

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           + +  +      Y+   + +      N         R + + VL                
Sbjct: 80  SALLEEINRISEYTYSYVASEPLGRDNYKEMYLFVYRTETISVLDSYCYPDPE-----DV 134

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +R    +        +    +         +  N  +   +L       +  W      
Sbjct: 135 FSREPFIVKFSSPNTAVKEFVLVPLH----SAPHNAVAEIDALYDVYLHVIDKW------ 184

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                +  GDFN    Y+  ND     +  ++       +       N +       D  
Sbjct: 185 GTDDILFLGDFNADCKYVRPNDWAKIRLRTSEIFKWLIPDDTDTTVGNSDCAY----DRI 240

Query: 261 VMDQN-AYKFLIQESFSEILYNEDDIKS--RGKRLSDHCPISIDY 302
           V   +   K +   S     + +           +SDH P+ +  
Sbjct: 241 VACGSHLRKCIAPNSAMVNNFQKSFSLDQTAALAISDHFPVEVTL 285


>gi|91082233|ref|XP_972708.1| PREDICTED: similar to 2-phosphodiesterase [Tribolium castaneum]
 gi|270007451|gb|EFA03899.1| hypothetical protein TcasGA2_TC014029 [Tribolium castaneum]
          Length = 571

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 85/323 (26%), Gaps = 38/323 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGV-------SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
                R+VS+NI      +                        L  +     + D++ LQ
Sbjct: 247 SGDTFRVVSYNILADLYCDSDFTREVLHPYCPPYALAIDYRKQLFIKEITGYNGDLICLQ 306

Query: 73  EMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH------TAIAVRKKNVRV 123
           E+        +  +F +  +   +  +R           +        T   V    +  
Sbjct: 307 EVDRKIYNYDLQPLFEQLGYDSDFCIKRGSVAEGLACFYNRERFKCLETFRLVLSDELNT 366

Query: 124 LQQSYPLLGAKDSFSRAGNRR-----AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 +    +       R       +++ +  + +   VL +      F    ++   
Sbjct: 367 NSLFSDIWAKIEGNKNLTERILNRSTVLQVNILESLENDEVLVVGNTHLYFHPDADHIRL 426

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-----------NYLGNNDDFWKT 227
              + + +  + L D    K +  +  ++ GDFN              +   ++ DF   
Sbjct: 427 LQGAAIIRYLEHLMDEFRNKYKKRLSLILCGDFNSTPECGIYQLYTTGHVPEDHIDFKSN 486

Query: 228 IDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYN 281
            +    +      +      +    N        +DY     +N     +    S    N
Sbjct: 487 AEEAIKVPLSQSLRLFSACGTPKYTNFTAGFADCLDYIYFESKNFEVVQVVPFPSLEELN 546

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
           +          SDH  +  D  +
Sbjct: 547 QHTALPSIVFPSDHISLISDLKW 569


>gi|886276|gb|AAB00495.1| DNase I [Homo sapiens]
 gi|1203972|gb|AAA92647.1| DNase I-like protein [Homo sapiens]
          Length = 302

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F  +      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181
                     +       R        +       + ++ +H         L   Y    
Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +                      ++ GDFN     L         +           + 
Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +              +   +  +     L   +  +   +    +     +SDH P+ ++
Sbjct: 214 EDTTVRASTHCTYARV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271

Query: 302 Y 302
            
Sbjct: 272 L 272


>gi|65318105|ref|ZP_00391064.1| hypothetical protein Bant_01001334 [Bacillus anthracis str. A2012]
          Length = 206

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 20/189 (10%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      +++++ N+  LS      L+ N  +   +D      Y K  + D+V L E+ 
Sbjct: 29  TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82

Query: 76  SYNAVAKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             +A  ++           T         E         S       +A+  K   V + 
Sbjct: 83  DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            Y             N+  V   ++ N + + V+  HL++    DS+    SP+ S+ + 
Sbjct: 143 QYVFANGCGP-DNLSNKGFVYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197

Query: 187 QAQWLKDWI 195
           Q + ++D+I
Sbjct: 198 QLKEIQDFI 206


>gi|323355424|gb|EGA87248.1| Isc1p [Saccharomyces cerevisiae VL3]
          Length = 477

 Score = 72.3 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 91/328 (27%), Gaps = 62/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61
           S A  ++ +++N   L       + K+  +R  +    L                     
Sbjct: 34  SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSTLTPISDELLPNGGDSN 88

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +N D D++ LQE+        +          S                  AI  +    
Sbjct: 89  ENEDYDVIALQEIWCVEDWKYLAS-----ACASKYPYQRLFHSGILTGPGLAILSKVPIE 143

Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 +P+     A         +     ++    + I +++ H+ +           +
Sbjct: 144 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 199

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230
                 S QA      I   +++    ++ GD N +   L +            W+ +  
Sbjct: 200 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHG 259

Query: 231 NDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275
              L    +           + C++  N     +       +DY ++D +  + +     
Sbjct: 260 KQDLAVIARLSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTVDAG-- 317

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +   + I      +SDH   S   +
Sbjct: 318 ---VRFTERIPHLDCSVSDHFAYSCTLN 342


>gi|170703197|ref|ZP_02894004.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10]
 gi|170131894|gb|EDT00415.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10]
          Length = 257

 Score = 72.3 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 85/307 (27%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +               ++    +AD V +QE  + + +  A
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIKVSADDLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + +  ++       +S     +       +              +G   S     
Sbjct: 47  DFVEPHGFRSYFHHAEKKGYSGAGVYSRHEPDDVI--------------IGFGSSEFDPE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ V+ +++ S    +  +                L        +S
Sbjct: 93  GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAEL--------KS 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N     +   +                +   +  +   +   +  D R  
Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTQLFDDVGYVDVFRTLDPRPE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +          + S             +  + SDH P
Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKRTSI-----------FKDIKFSDHAP 248

Query: 298 ISIDYDF 304
           +++DYD+
Sbjct: 249 LTVDYDY 255


>gi|163759035|ref|ZP_02166121.1| hypothetical protein HPDFL43_04705 [Hoeflea phototrophica DFL-43]
 gi|162283439|gb|EDQ33724.1| hypothetical protein HPDFL43_04705 [Hoeflea phototrophica DFL-43]
          Length = 344

 Score = 72.3 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/337 (11%), Positives = 90/337 (26%), Gaps = 69/337 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRT-------------TSDYTLLRQYAKNLD----ADI 68
           +  WN+  L   EG    +  + +                    L      +      D+
Sbjct: 6   VGFWNLENLFAPEGFPAREPWIAKKNAGDLKGWTQALFDRKIDQLASIIVQMGGGAGPDL 65

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + + E+ +  A+  +  +    +      +++         I TA    K  + +++   
Sbjct: 66  LGVCEVENRFALEALSDRLDQLLPGRNYSIVHADSTKDKRGIDTAFIFDKNRLVIIETEI 125

Query: 129 PLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLSQ 186
               +     R G R   +      +G ++  L  H  S              +   L  
Sbjct: 126 F---SHFVMRRTGTRDITQCTFVTNSGNQLIALSNHWPSRSGGTIESAGYRMTAGETLGY 182

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDP 230
                 + I ++++     +  GD N                       +    +  +  
Sbjct: 183 W----HERIREERDKDAAVIAMGDMNDDPYDASLMVHANARRERDDVEGSTSAMFYNLSW 238

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKI---PIDYFVMDQNAYK-----FLIQESFSEILYNE 282
           N        +   +      L  K      D  ++ ++  K      +++++     Y E
Sbjct: 239 NLLRQTVTSKSGRKRTLYGTLYFKGDANLFDQILVSRSLLKGSTPLKVLEDTVRIEAYPE 298

Query: 283 DDIKSRGKRL-------------------SDHCPISI 300
               S+ +                     SDH P+S+
Sbjct: 299 MTSNSKNEGPIRFGMAKGNAARNVNTDGYSDHFPVSV 335


>gi|6320856|ref|NP_010935.1| Isc1p [Saccharomyces cerevisiae S288c]
 gi|731443|sp|P40015|ISC1_YEAST RecName: Full=Inositol phosphosphingolipids phospholipase C;
           Short=IPS phospholipase C; Short=IPS-PLC; AltName:
           Full=Neutral sphingomyelinase; Short=N-SMase;
           Short=nSMase
 gi|603611|gb|AAB64552.1| Yer019wp [Saccharomyces cerevisiae]
 gi|285811643|tpg|DAA07671.1| TPA: Isc1p [Saccharomyces cerevisiae S288c]
          Length = 477

 Score = 72.3 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 91/328 (27%), Gaps = 62/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61
           S A  ++ +++N   L       + K+  +R  +    L                     
Sbjct: 34  SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSMLTPISDELLPNGGDSN 88

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +N D D++ LQE+        +          S                  AI  +    
Sbjct: 89  ENEDYDVIALQEIWCVEDWKYLAS-----ACASKYPYQRLFHSGILTGPGLAILSKVPIE 143

Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 +P+     A         +     ++    + I +++ H+ +           +
Sbjct: 144 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 199

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230
                 S QA      I   +++    ++ GD N +   L +            W+ +  
Sbjct: 200 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHG 259

Query: 231 NDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275
              L    +           + C++  N     +       +DY ++D +  + +     
Sbjct: 260 KQDLAVIARLSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTVDAG-- 317

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +   + I      +SDH   S   +
Sbjct: 318 ---VRFTERIPHLDCSVSDHFAYSCTLN 342


>gi|294628891|ref|ZP_06707451.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. e14]
 gi|292832224|gb|EFF90573.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. e14]
          Length = 248

 Score = 72.3 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 76/293 (25%), Gaps = 55/293 (18%)

Query: 13  LVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           L+P + +       VR++ +NI +L                  D+  L +  +    D+V
Sbjct: 2   LLPNSRTEPDGSAVVRVLGYNIRSL----------------QDDFEALARVIRACAPDLV 45

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE   +    K   +       S   L+  +   +        ++R    R      P
Sbjct: 46  LLQEAPRFFRWRKKLAR-----LASATDLVILTGGATAAGPAVLCSLRATVERTEDVLLP 100

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L   +        R     +V     ++ VL  HL                 +    Q+ 
Sbjct: 101 LTPGQHR------RGLATAVVRFGDARLGVLACHLSLV-------------AAERQDQSG 141

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L D + +        ++ GD N                D   +            +   
Sbjct: 142 LLLDRLAEMGVEHA--IVGGDINEGPEGPAFRRLADALQDGYATAPW------GGEHTWS 193

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  ID                  +    E D+    +  +DH P+    
Sbjct: 194 ATEPHRRIDAIFATPGIEVLGCGVPLDQPGVTEADL----RAATDHRPVLAAL 242


>gi|255066357|ref|ZP_05318212.1| endonuclease/exonuclease/phosphatase family protein [Neisseria
           sicca ATCC 29256]
 gi|255049237|gb|EET44701.1| endonuclease/exonuclease/phosphatase family protein [Neisseria
           sicca ATCC 29256]
          Length = 241

 Score = 72.3 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 79/256 (30%), Gaps = 38/256 (14%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYST-ERLINHSKR 104
                 + +  + + +D++FLQE+   +      +     K  + I         ++ K 
Sbjct: 11  KVQVDSMAEELRGIGSDVLFLQEVQGQHLTRSSRLPDFPEKPHYDILGDRLSYNRSYGKN 70

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
                 H   A+  +     + +  +     S ++   R  +   V   G +  ++ +  
Sbjct: 71  AVYPQRHHGNAILSRLPLETRHNLNI-----SVNKLEQRGVLHCEVLPEGWETPLVCLCA 125

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
                               ++Q + + +++    +   P ++AGDFN        +   
Sbjct: 126 HLNLREPD-----------RAKQYRAIFEYVVHHIDPQSPLILAGDFNDWRQKSALS--L 172

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
              ++ N+    F      R          + +D                   +     +
Sbjct: 173 GNALNLNE---VFVDSNGKRPKTFPARLPVLSLDRVYTRN----------LEVLDSQIHN 219

Query: 285 IKSRGKRLSDHCPISI 300
            K   +RLSDH P+S+
Sbjct: 220 GK-NWQRLSDHLPLSV 234


>gi|126664651|ref|ZP_01735635.1| Metal-dependent hydrolase [Marinobacter sp. ELB17]
 gi|126630977|gb|EBA01591.1| Metal-dependent hydrolase [Marinobacter sp. ELB17]
          Length = 289

 Score = 72.3 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 78/293 (26%), Gaps = 56/293 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFL 71
           +    +RL+++NI           +     +          +   +     N   D++ L
Sbjct: 33  AEGGHLRLLTFNIQVGISTSSYRHYLTRSWQHVLPHRSRFENLDRIATLLSNY--DVIAL 90

Query: 72  QEMGSYNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           QE    +  +    +  +    +          R+       +  +  +   +  + + L
Sbjct: 91  QECDGGSLRSGHINQVQYLAEAAGIPYWYQQLNRNLGQFAQHSNGLLSRFRPLEVKEHRL 150

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G          R  +          + ++ +HL                      Q + 
Sbjct: 151 PGL------IPGRGVIVAKYGNPEDPLLLVMMHLSLSKSA----------------QQRQ 188

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L  +++         V+ GD N               +   D +        +  ++  +
Sbjct: 189 L-GFVSDLISDYRHVVLMGDMNA----HAEQLLTNTPLKQTDLIPL-----PANAHSFPS 238

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            R +  +D+ ++  +                          +SDH PI++D  
Sbjct: 239 WRPEKALDHILVSPSL--------------QVHSSGVVSYPVSDHLPIALDIT 277


>gi|17554634|ref|NP_499388.1| hypothetical protein R17.2 [Caenorhabditis elegans]
 gi|3879187|emb|CAB07271.1| C. elegans protein R17.2, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 628

 Score = 72.3 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 81/322 (25%), Gaps = 43/322 (13%)

Query: 23  KVRLVSWNI------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            +R++S+NI              L         +  + RT      L  +  +    ++F
Sbjct: 306 TIRIMSYNILADLYLNLTLPQEQLFFNYCQKSSQRIIYRTPIFLKQLHDFIHSARCSLIF 365

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLI----NHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           LQE+        + P      + S         +       +     +   K        
Sbjct: 366 LQEVDLSRHENFIVPFLNTISYSSEIAKKVGTVSEGVAIIFDSQRFQVISSKCYGVAELA 425

Query: 127 SYPLLGAKDSFSRAGNRR-----AVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSPS 180
           S  +LG  ++   +  R       ++++V  + +   +L                    +
Sbjct: 426 SGDILGILETSEESKERFSTRPTVLQIVVLKDSRTGKLLVCGNTHLHHNPIDEHVKVLQA 485

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------GNNDDFW----- 225
            +   +  +  ++     K   V  +  GDFN   N               D  W     
Sbjct: 486 LTCTRKLLEIYEETRELNKGIEVLVLFGGDFNSTPNGAVFNLMSMGNLPKEDAVWNCDSK 545

Query: 226 ---KTIDPNDSLIRFPKEKDSRCNANKN--LRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
              + I  +  +       +       +        +DY                 E + 
Sbjct: 546 ITPQDIKIDKKMDCLTGTPEYTNYTASSQKDGFVGCLDYIWGVGATSIRHCPLPSHEKVI 605

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDH PI  D 
Sbjct: 606 K-YTALPSPISPSDHLPIICDI 626


>gi|257126278|ref|YP_003164392.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
 gi|257050217|gb|ACV39401.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
          Length = 263

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 83/299 (27%), Gaps = 54/299 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79
           +++++ N++  L E                   +L +       D++ +QE+    +   
Sbjct: 1   MKILTVNVHAWLEEN------------QMEKIDILARTIAEKQYDVIAMQEVNQLMNNKI 48

Query: 80  VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +     +  +             +   L   +        +  +AV  ++    +  +  
Sbjct: 49  IFDDIREENYAWVLLETLQKYTDTDYYLHWSNSHIGFGKYNEGVAVITRHKIKAEDEF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                S      RR V + +   G+ I     H+                          
Sbjct: 108 CTFAQSVRTISARRIVSITINYEGQDIEFYSCHMNLPNCETEDMGKN------------- 154

Query: 191 LKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEK---DSRC 245
               I  + ++    ++ GDFN     N     +   + +     +     +    D   
Sbjct: 155 -IQTILNRTQNSNLKILMGDFNTDAIGNVAAYENILSQGLFDTYVMAEKKDDGITVDKSI 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +   N + K  +DY   ++       +  F+               +SDH  I +  +F
Sbjct: 214 HGWDNDKAKKRLDYIFSNKELKVKESKVIFNNKNKEI---------VSDHFGIEVKIEF 263


>gi|45657327|ref|YP_001413.1| exodeoxyribonuclease [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|294828126|ref|NP_712697.2| exodeoxyribonuclease [Leptospira interrogans serovar Lai str.
           56601]
 gi|45600565|gb|AAS70050.1| exodeoxyribonuclease [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|293385973|gb|AAN49715.2| exodeoxyribonuclease [Leptospira interrogans serovar Lai str.
           56601]
          Length = 254

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 71/269 (26%), Gaps = 58/269 (21%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  Y +N   D +  QE     A     P + W     T          +    ++ +AV
Sbjct: 19  LADYIRNTKPDFICFQE---TKANQDQVPPSLWEEGGYT-----PVFHSAEKKGYSGVAV 70

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K           +G  D F     R      + +      + +++  S    D  +  
Sbjct: 71  LYKKPP----EKITIGIGDPFFDKEGRS-----IYLEYPNFALWNLYFPSGTTGDIRQAA 121

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------YLGN 220
                    +     +   +++++     ++ GD N                        
Sbjct: 122 K-------MKFLDLFQKESSKRRKKQPNIIVCGDVNIAHTPQDIHDPKGNAKSSGFLPEE 174

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQE 273
            +   + ++            D +  +    R           IDYF + +   K +   
Sbjct: 175 REWLSEFLNKGWVDTFRYLYPDKQEYSWWTFRAGARAKNKGWRIDYFFVTEELKKNVKSH 234

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           S             R K  SDH P+  + 
Sbjct: 235 SI-----------FRDKPFSDHAPLEFEI 252


>gi|307564579|ref|ZP_07627119.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           amnii CRIS 21A-A]
 gi|307346737|gb|EFN92034.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           amnii CRIS 21A-A]
          Length = 349

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/324 (10%), Positives = 81/324 (25%), Gaps = 60/324 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDADI------ 68
           +  +N   L +        +           +  + +     + +    +  D+      
Sbjct: 29  VGFYNQENLFDYTHDKGKNDYDFTPNGSYHWNKMKYSHKLANMSRVLSEMGTDVLPKVGC 88

Query: 69  --VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             + L E  + + V  +  +              H +      I  A   + K   V   
Sbjct: 89  AFIGLAECENDHVVKDLVAQP---ALAQRGYKYIHIEGPDRRGIDCAFIYQPKLFTVRNT 145

Query: 127 S-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
              P +      S    R  + +   +  + + V+  HL S           +       
Sbjct: 146 KLIPYIYELAKDSAHATRGFLTISGTMANEHVSVIVCHLPSRGASSYYRELGAK------ 199

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLIRFPK 239
            Q + +KD + Q ++     ++ GD N        +       +       +     +  
Sbjct: 200 -QIKVIKDSLLQ-EDPNCKVIVMGDMNDDPTNASMHKYLSAKAEISEVGTNDMYNPWYNI 257

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--------- 290
                    +        D  ++  N       + F+ + Y ++ I  R           
Sbjct: 258 LVKQGTGTLQYQGRWNLFDQIILSPNFLNKNGSKDFTTLKYWKNQIFKRDYLFQQEGKYK 317

Query: 291 --------------RLSDHCPISI 300
                           SDH P  +
Sbjct: 318 GNTKRTTAGGVWLDGYSDHLPTVV 341


>gi|291234353|ref|XP_002737115.1| PREDICTED: deoxyribonuclease I-like [Saccoglossus kowalevskii]
          Length = 279

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 84/310 (27%), Gaps = 38/310 (12%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M      A++     C  +    V + +WNI    +         S         ++   
Sbjct: 1   MKIHIAFAILVLGAACVQAS---VYISAWNIQVFGK---------SKMSDPEVVQVIVDV 48

Query: 61  AKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            +    DI  +QE+   +  AV  +  +       +    +      +++    A   R 
Sbjct: 49  IERY--DICAVQEVRDIDEIAVYDLLDELNAQNNGAFSLELGPRVGRTSSKEQYAFYYRH 106

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
             V V++         DS      R    +    +   +             D++     
Sbjct: 107 DVVSVVRSYTYD----DSKHDYFEREPHMVDFSTSHSALTRFVFGAIHVKPDDAVAEIDY 162

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                       L +       + V  +I GD+N   +Y+  +D  + +           
Sbjct: 163 L----------TLVNDDAVDVYNNVNVLIGGDYNADCDYVREDDWQYISYRTQSRFSWLI 212

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI-----KSRGKRLS 293
            +      A+ +      + +              S     Y+ D        +    +S
Sbjct: 213 GDDADTNLASSSCAYDRLVTH---GAGFTDAFRPGSAKVFYYDIDLYGTPMDPTLALDVS 269

Query: 294 DHCPISIDYD 303
           DH P+ +  D
Sbjct: 270 DHYPVEMIID 279


>gi|301067802|ref|YP_003789825.1| metal-dependent hydrolase [Lactobacillus casei str. Zhang]
 gi|300440209|gb|ADK19975.1| Metal-dependent hydrolase [Lactobacillus casei str. Zhang]
          Length = 355

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 89/324 (27%), Gaps = 65/324 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            Q    +++NI               G      S K   +    + +  +  + D+ F Q
Sbjct: 52  GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRAYSKKSVRTSINGVIKTTQAQNPDVAFYQ 111

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTER-----------LINHSKRDSNNDIHTAIAVRKKNV 121
           E+      ++   +         +             + +          + I    K  
Sbjct: 112 EIDPDGDRSQHVNEVKMVTGAQQQYANIYGQNYDSAYLFYPFTQPIGKTKSGILTLSKAK 171

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP 179
               + Y L    D        RA         NGK+  +++IH+ +F            
Sbjct: 172 VDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAFTPN--------- 222

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              +   Q   L  +I Q  +     ++AGD+N ++          K +D   + +    
Sbjct: 223 -VKIQQAQFTKLFKYIEQAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPKS 281

Query: 240 EKDSRCN--------------------ANKNLRNKIPID-YFVMDQNAYKFLIQESFSEI 278
           +  +  +                              ID Y +   N    +  ES   +
Sbjct: 282 KLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYIL-SPN----IKAESVHVV 336

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
                     G + SDH P+ + +
Sbjct: 337 ST--------GFQYSDHNPVVLKF 352


>gi|301052087|ref|YP_003790298.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacillus anthracis CI]
 gi|300374256|gb|ADK03160.1| possible endonuclease/exonuclease/phosphatase family protein
           [Bacillus cereus biovar anthracis str. CI]
          Length = 263

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLVERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKIRSSKVV 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+               +SDH  + +  D
Sbjct: 243 FNGTNRKV---------ISDHFGVEVQVD 262


>gi|323305214|gb|EGA58961.1| Isc1p [Saccharomyces cerevisiae FostersB]
          Length = 471

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 91/328 (27%), Gaps = 62/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61
           S A  ++ +++N   L       + K+  +R  +    L                     
Sbjct: 28  SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSTLTPISDELLPNGGDSN 82

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +N D D++ LQE+        +          S                  AI  +    
Sbjct: 83  ENEDYDVIALQEIWCVEDWKYLAS-----ACASKYPYQRLFHSGILTGPGLAILSKVPIE 137

Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 +P+     A         +     ++    + I +++ H+ +           +
Sbjct: 138 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 193

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230
                 S QA      I   +++    ++ GD N +   L +            W+ +  
Sbjct: 194 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHG 253

Query: 231 NDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275
              L    +           + C++  N     +       +DY ++D +  + +     
Sbjct: 254 KQDLAVIARLSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTVDAG-- 311

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +   + I      +SDH   S   +
Sbjct: 312 ---VRFTERIPHLDCSVSDHFAYSCTLN 336


>gi|149279400|ref|ZP_01885531.1| hypothetical protein PBAL39_13817 [Pedobacter sp. BAL39]
 gi|149229926|gb|EDM35314.1| hypothetical protein PBAL39_13817 [Pedobacter sp. BAL39]
          Length = 275

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 88/305 (28%), Gaps = 41/305 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           IRK  L   FF +   A  AQ + + SWN+                 +TT+    + +  
Sbjct: 7   IRKATLFATFFFIHIVAF-AQTISICSWNVKDFG-----------QSKTTAQLQFIARTI 54

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           K  D DIV +QE+ +     K   +    +  + +         ++ D ++         
Sbjct: 55  K--DFDIVAIQEVVAGVGGPKAVIRLHEELNKTGQEWQYSISHGTSGDRYSKERYVFFWK 112

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
               Q       +  ++   NR        +  K   +   H          E +Y    
Sbjct: 113 SKKLQMIGPAWLEKKYNLEINREPYLARFNMGKKTFMIGSFHAIPKSKQPETEISYLKFL 172

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFP 238
             L  Q                  ++ GDFN   ++   N       +P   N       
Sbjct: 173 PALYPQ---------------DQLILCGDFNLSQSHSVFNPLKKMGYEPSMINQKTSLRQ 217

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           K  +  C A++        D F                   + +       + +SDH P+
Sbjct: 218 KCINGDCLASEY-------DNFFY-PGKGINCKSSGI-IPFFQQFSDFKDARLVSDHVPV 268

Query: 299 SIDYD 303
            + + 
Sbjct: 269 FLKFS 273


>gi|49116840|gb|AAH73585.1| LOC443670 protein [Xenopus laevis]
          Length = 559

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 84/331 (25%), Gaps = 55/331 (16%)

Query: 19  SVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           + A   R VS+NI         LS                  + LLR+      AD++ L
Sbjct: 238 AGAGTFRTVSYNILADVYARTELSRDVLYPYCPARALGAQYRHNLLRRELSGYRADVLCL 297

Query: 72  QEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-------- 120
           QE        A+  V  +      Y  ++  +       +     +  +           
Sbjct: 298 QEAERDVFEGALGPVLEELGMEGRYLEKQRQHEGLATFYSRDRFRLLGQHDISLSEGLLS 357

Query: 121 -VRVLQQSYPLLGAKDSFSRAGNRRAVELL-----VEINGKKIWVLDIHLKSFCFLDSLE 174
             R+      L   +++  +   R +V  +     +E   ++I V + HL       +  
Sbjct: 358 DPRLSDLRERLSLYREAREKLLKRSSVLQVLVLESIEDPSRRICVANTHLYFHPKGGN-- 415

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                   +   Q       +          +P V  GDFN   +   +       +  +
Sbjct: 416 --------IRLLQVAVALAHLGHVANELYGGIPVVFCGDFNSLPDTGLHRFIKGGAVGED 467

Query: 232 DSLIR-----------------FPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQE 273
           D                                N        +DY  +         I  
Sbjct: 468 DEDWTSNGEEEQCNMALTHPFKLTSACGEPAYTNYIGEFHGCLDYIFIDSARLAVERIIP 527

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +     +       +  SDH  +  D  +
Sbjct: 528 LPTHQEVTKYRALPSIEHPSDHMALVCDLKW 558


>gi|33604227|gb|AAH56304.1| Deoxyribonuclease I-like 3 [Danio rerio]
          Length = 315

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 91/310 (29%), Gaps = 40/310 (12%)

Query: 2   IRKYVLALVFF--LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           IR+ +L++     L+ C        R+ ++N+ +           +S          + +
Sbjct: 3   IRRILLSIFLLSGLLTC-----YGFRICAFNVQSFG---------DSKSADAKIMNSISR 48

Query: 60  YAKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                  DI  LQE+      A+ ++            + + +     +       +   
Sbjct: 49  IVARC--DICLLQEVRDQKNKAIPRLLEAVNKIGDNDFQYVASERLGRTQTYQEQYVFFY 106

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLE 174
           +K+  +L+  Y     +     A +R    +  +      K+  ++  H         ++
Sbjct: 107 RKSTAILKGQYQYPDTQTGDVDAFSREPFVVYFQAPKTLAKEFVLIPQHTTPSNATKEID 166

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
             Y     +  +                   +  GDFN    Y+   +     +  + S 
Sbjct: 167 ELYDVFVDVKGRW-------------ETENVMFLGDFNAACGYVAKKNRKNIRLYTDPSF 213

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-- 292
               ++                I   V  +   + +   S     + ++ + +  + L  
Sbjct: 214 TWLIQDNVDTTVKESTDCAYDRI--VVHGEPFLRSIEPFSAQPFNFPKEFLLTEAQALEV 271

Query: 293 SDHCPISIDY 302
           SDH PI +  
Sbjct: 272 SDHYPIEVVL 281


>gi|288560371|ref|YP_003423857.1| exodeoxyribonuclease III Xth1 [Methanobrevibacter ruminantium M1]
 gi|288543081|gb|ADC46965.1| exodeoxyribonuclease III Xth1 [Methanobrevibacter ruminantium M1]
          Length = 246

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 79/297 (26%), Gaps = 72/297 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++++SWN+N                RT      +    +    DI+  QE  +       
Sbjct: 4   LKIISWNVNG--------------IRTRIKNKDINPVLEKE-PDIILFQETKASYEQMDK 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K   KN +  ++            S  +I   I  R                      A 
Sbjct: 49  KFLNKNPYDYYFLKGESARTGGLASFTNIVPKIIKRFFIKS---------------QDAF 93

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R  V     ++ +   ++ I+  +     +  N      + L +  +         K  
Sbjct: 94  HRACV-----LDFEDFTLIHIYAPAGTGKKANFNQKLDYFNSLLKYVE---------KNK 139

Query: 202 LVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
               +IAGDFN   N                       ++    +       +    +  
Sbjct: 140 DKNLIIAGDFNIAHNDIDISNKDTKVSFTDEERSVLDKLESFGFVDALRLFNEEESFSYW 199

Query: 250 NL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +   +DYF + ++    +   S    +               H PI ++ +
Sbjct: 200 KNKEENDGARLDYFFVSESLKDKVKSSSILVDVEGSK-----------HLPIELEIE 245


>gi|227489312|ref|ZP_03919628.1| possible exodeoxyribonuclease III, exonuclease III [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227090685|gb|EEI25997.1| possible exodeoxyribonuclease III, exonuclease III [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 233

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 79/294 (26%), Gaps = 75/294 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   + +  + +     D D++ LQE          
Sbjct: 1   MRIATWNVN----------------SARARFGRITELLARHDIDVLALQETKIKEF---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +  +       +    +A+  +      Q+    G  D   +   R
Sbjct: 41  ------------PPVKGYEVAHVGYNQWNGVAILSRVGLKDVQT-SFTGQPDYEGKKEGR 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +     GK   +  I++ +   +D     Y           ++L ++         
Sbjct: 88  AISAV---CGGK--RIWSIYVPNGRAVDHPHYDYK---------LRFLYNFARYAAPGAD 133

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +  GDFN                +        ++ +     ++           A + 
Sbjct: 134 --LAMGDFNVIPGPEDVYDESPFETHVTEPERAAFEYLTDVLPVVSPTGYTYWDYQARRF 191

Query: 251 -LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                + ID+ +    A    +            D   R  + SDH P+  +Y+
Sbjct: 192 DRDQGMRIDFHLSTTPATSGFV------------DRAERAAKSSDHAPVICEYE 233


>gi|146278429|ref|YP_001168588.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556670|gb|ABP71283.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC
           17025]
          Length = 240

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 74/282 (26%), Gaps = 54/282 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A ++ + S+NI+           K        D          LDAD+V LQE       
Sbjct: 3   APEITVASYNIH-----------KGIGTDRRRDLRRTSAVIAELDADLVALQEADRRFGD 51

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        +    +        +  H  + + ++          L G        
Sbjct: 52  RAGLLDLEHLRAETGLVPVQVEGSGRAHGWHGNLLLVREAEVEEVHKIVLPG-------F 104

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+ + + ++G+ + V+  HL                    + Q + L + I     
Sbjct: 105 EPRGALMIDLLMHGRPLRVIAAHLGLLPGS-------------RAAQTRHLLERIEAGAP 151

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++ GD N             +       +            +  +    + +D  
Sbjct: 152 --RPTLLMGDLNEWRGSGAAMSHLARHFTGAVMV-----------RSFPSRFPILALDRL 198

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  ++     +                  +R SDH PI    
Sbjct: 199 MTCKHGRLQDV----------VPHDTPLARRASDHLPIKARL 230


>gi|58580132|ref|YP_199148.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58424726|gb|AAW73763.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 285

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 86/322 (26%), Gaps = 83/322 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P     +  +R++S+N N L        +                +    DAD++ +QE 
Sbjct: 11  PFPNPGSSSMRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQET 55

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +     ++   +     +         +  S    ++ +A+  ++     ++       
Sbjct: 56  KAQE--HQLAGPD-----FLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEF 108

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D   R          +E       V+  ++ S    +  +           Q  QWL+  
Sbjct: 109 DEEGRY---------IEARFGNRSVVSFYIPSGSSGELRQGYK-------FQVMQWLRPI 152

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-----------------DSLIRF 237
           + +   S   +V+ GD+N     L   +      +                   D     
Sbjct: 153 LDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADVPDDANAA 212

Query: 238 PKEKDSRCNA--------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
                                  N+           IDY ++       L   S      
Sbjct: 213 EGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPGLRDTLRACSI----- 267

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                  R +R SDH P  +DY
Sbjct: 268 ------YREERFSDHAPYIVDY 283


>gi|15672773|ref|NP_266947.1| exodeoxyribonuclease A [Lactococcus lactis subsp. lactis Il1403]
 gi|12723711|gb|AAK04889.1|AE006312_9 exodeoxyribonuclease A [Lactococcus lactis subsp. lactis Il1403]
 gi|326406342|gb|ADZ63413.1| exodeoxyribonuclease III [Lactococcus lactis subsp. lactis CV56]
          Length = 334

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 84/311 (27%), Gaps = 62/311 (19%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +SWNI++L+          + +R       + +       D++ +QE    +   K  
Sbjct: 53  KFISWNIDSLNA-----ALTGTSERAALSL-AVVKNLAQAQPDVLAIQETKLPSTGPKKA 106

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   +   +++  S  +     ++   +  K                    A  R 
Sbjct: 107 HLEVLEELFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRI 166

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + +     +V  ++  +     +  +               L        ++  P
Sbjct: 167 -----ITLEFPDFFVTTVYTPNAQEGLTRLDLRGIWDDNYRNYLTSL--------DAQKP 213

Query: 205 FVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIR------FPKEKD 242
               GDFN     +                   + F + ++   +           K  +
Sbjct: 214 VFACGDFNAAYTEIDLANPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRQLHGQVEKFYE 273

Query: 243 SRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
              +       +            IDY+++     + +             +    G+RL
Sbjct: 274 EGRSIYTWFAQRAKTSKLNNSGWRIDYWLVSNRLAQAV----------KVSEPLDSGERL 323

Query: 293 SDHCPISIDYD 303
            DH PI ++++
Sbjct: 324 -DHVPILLEFE 333


>gi|322710982|gb|EFZ02556.1| endonuclease/exonuclease/phosphatase family protein [Metarhizium
           anisopliae ARSEF 23]
          Length = 641

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/332 (11%), Positives = 84/332 (25%), Gaps = 64/332 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEMGS 76
           ++    + +  +N   L+                   +++ Q    L   D++FLQE+  
Sbjct: 326 SANCNGLTVADYNAENLAPNSAHLP------------SVVSQIVTKLRTPDLIFLQEVQD 373

Query: 77  YNA-VAKVFPKNT----------------WCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            +  V                           F     +          +I  A   R  
Sbjct: 374 NSGPVDDGVTSANLTLSTLTQGIEKTSGVRYDFVEVAPVDGQDGGQPGGNIRCAYLYRPD 433

Query: 120 NVRV------------------LQQSYPLLGAKDSFSRAGNRRAVELL---VEINGKKIW 158
            V +                    +  P    +   +    R+ +  +   V+   K  +
Sbjct: 434 AVELYKPNPGGSNDENAVVDGPSIKYNPGRIGQSDANFEATRKPLVAMWKPVKGPNKVFF 493

Query: 159 VLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFN 212
            +++H  S      L               + Q +   ++I Q   ++     + AGDFN
Sbjct: 494 TINVHFSSKGGSTGLHGDPRPPVNKGVEKRTGQMELTANFIAQILAQDPKARIITAGDFN 553

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                       + +                        +N   +D+  + +        
Sbjct: 554 EFTQVQPV--TTFTSKSGLLDADEVAGLAAVERYTYLFDQNSEALDHMYISRGL-----A 606

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   + +  ++   + SDH P     +F
Sbjct: 607 NHAQVEHLHLNTWQNYDGQTSDHDPSVAKLNF 638


>gi|151944728|gb|EDN62987.1| Inositol phosphosphingolipid phospholipase C [Saccharomyces
           cerevisiae YJM789]
          Length = 471

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 91/328 (27%), Gaps = 62/328 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61
           S A  ++ +++N   L       + K+  +R  +    L                     
Sbjct: 28  SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSTLTPISDELLPNGGDSN 82

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +N D D++ LQE+        +          S                  AI  +    
Sbjct: 83  ENEDYDVIALQEIWCVEDWKYLAS-----ACASKYPYQRLFHSGILTGPGLAILSKVPIE 137

Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 +P+     A         +     ++    + I +++ H+ +           +
Sbjct: 138 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 193

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230
                 S QA      I   +++    ++ GD N +   L +            W+ +  
Sbjct: 194 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHG 253

Query: 231 NDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275
              L    +           + C++  N     +       +DY ++D +  + +     
Sbjct: 254 KQDLAVIARLSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTVDAG-- 311

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +   + I      +SDH   S   +
Sbjct: 312 ---VRFTERIPHLDCSVSDHFAYSCTLN 336


>gi|332883313|gb|EGK03596.1| hypothetical protein HMPREF9456_01663 [Dysgonomonas mossii DSM
           22836]
          Length = 305

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 77/331 (23%), Gaps = 66/331 (19%)

Query: 4   KYVLALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           K +L ++F  + C+ S AQ     +++++S+NI                           
Sbjct: 6   KALLIILFIFIVCSHSKAQSVAPIELKVMSFNIWHGGGSS---------------IGATG 50

Query: 59  QYAKNLDADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +      ADI+ +QE      N    +     W  +                       +
Sbjct: 51  KVFVESQADIIGIQESTHKEKNTAVHLADSLGWHSYVFE-----------------GRTI 93

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K   V   +                     L+    +   +  I       L S +  
Sbjct: 94  ITKYPIVDTSANNHGVKIKIDKDHFVWMFNVHLMYCPYEPYQLNGIEYCGGPILHSAQEA 153

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------- 229
            + +              I + ++   P  + GDFN               +        
Sbjct: 154 IASAIKSRGSTVDSNIADIIEVRKEGYPIFLTGDFNEPSYLDWTAKAADAGLCKTAVEWP 213

Query: 230 -----------PNDSLIRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLI 271
                       +     +P E     +    L            ID+ +      +   
Sbjct: 214 STKVFSEKGGMKDSYRTFYPDEVRKPGHTWTTLPETTAYKEVLDRIDFVLFSGEKIELKN 273

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +   E     D         SDH  +   +
Sbjct: 274 SQIVGEESPLSDIRFKN--YPSDHRAVLSTF 302


>gi|326508336|dbj|BAJ99435.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 912

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/248 (10%), Positives = 63/248 (25%), Gaps = 9/248 (3%)

Query: 17  TASVAQKVRLVSWNI--NTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
               A++ +++S+NI  + L+   Q+      + +         +         DI+  Q
Sbjct: 184 PPRHAERFKVLSYNILADYLAQEHQDLYRDIPSFIMDWNWRKNRIGLEISCWRPDIICFQ 243

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLL 131
           E+  +  + +      +   +                     +  ++            +
Sbjct: 244 EVDKFTDLEQEMSTRGYTGIWKMRTGNAVDGCAIFWRTARFQLCYKEDIEFNKLGLRDNV 303

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                      R        ++   I          C +  L N       L   Q + L
Sbjct: 304 AQLCVLESVFQRNVQTGSTHLSTSSIHPQQAKQVVICNIHVLYNPKRGDIKL--GQIRTL 361

Query: 192 KDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            D      +  +  P ++ GDFN        N    + ++           + +  +   
Sbjct: 362 LDRAYATSKRWNDAPVILCGDFNATPKSPLYNYILEQKLNLFGLARNAISGQQTSSHGLY 421

Query: 250 NLRNKIPI 257
              N    
Sbjct: 422 TGSNTSRY 429



 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 23/76 (30%)

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
              +               + N +    +DY    ++     + ++F E +  E      
Sbjct: 835 TDVEDFHGTKDANKEPLVTSYNRKFMGTVDYIWASEDLQTVSVLDTFPEGILKETIGFPT 894

Query: 289 GKRLSDHCPISIDYDF 304
            K  SDH  +  +  F
Sbjct: 895 KKWGSDHIALVCELAF 910


>gi|254491099|ref|ZP_05104280.1| exodeoxyribonuclease III [Methylophaga thiooxidans DMS010]
 gi|224463612|gb|EEF79880.1| exodeoxyribonuclease III [Methylophaga thiooxydans DMS010]
          Length = 259

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 90/307 (29%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           +R+++ N+N +        +                +    +AD+V +QE  +       
Sbjct: 1   MRIITVNVNGIRAAARKGFF---------------DWLLKQNADVVCIQETKAQIHQLED 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            VF    +  FY       +S          A+  R +   V+       G  +      
Sbjct: 46  AVFTPQGYHCFYHDAEKKGYSG--------VALYCRSEPDEVIV------GMDNPEFDVE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +E    K+ V+ +++ S    +  +            + Q +K        S
Sbjct: 92  GRY-----IEARFGKLSVISLYMPSGSSKEERQQVKYRCMDFFEIKMQEMKA-------S 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246
              +VI GD+N         +                    +      +   +E   + +
Sbjct: 140 GRDYVITGDWNIAHKNEDIRNWKGNLKNSGFLPEERAWLDKLFDEMGFVDAFRELPQQEH 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++  +    +                 R +R SDH P
Sbjct: 200 EYTWWSNRGQAWANNVGWRIDYHILSPSMKGTVKATDI-----------YRDERFSDHAP 248

Query: 298 ISIDYDF 304
           ++IDYD+
Sbjct: 249 LTIDYDY 255


>gi|195977651|ref|YP_002122895.1| exodeoxyribonuclease ExoA [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974356|gb|ACG61882.1| exodeoxyribonuclease ExoA [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 275

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +   ++     +  S  +     +       K       ++P +GA  +    G  
Sbjct: 55  KHLESLLGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        ++  
Sbjct: 114 -----IITLEFDDFFVTQVYTPNAGDGLRRLEERQLWDQKYADYLAQL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 SWWAQRSKTSKLNNTGWRIDYWLTSNRLIDKVSRSEMISSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 LLEID 274


>gi|325293384|ref|YP_004279248.1| endonuclease/exonuclease/phosphatase [Agrobacterium sp. H13-3]
 gi|325061237|gb|ADY64928.1| endonuclease/exonuclease/phosphatase [Agrobacterium sp. H13-3]
          Length = 343

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 86/339 (25%), Gaps = 68/339 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNS-VKRTTSDYT---------------LLRQYAKNLDADIV 69
           L  WN+  L   EG    +    +R  +D                 L+ +       D++
Sbjct: 6   LAFWNVENLFAPEGYPAREPWIAERLKNDLKGWTEDLFKTKLRQLGLIIRQIGGAGPDLL 65

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            + E+ +   +  +       +     R+++         I TA     K + + +    
Sbjct: 66  GVCEVENRFVLETLAEHLNDLMPERAYRVVHADSSKDQRGIDTAFIYDSKKLLINETEIF 125

Query: 130 LLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLSQQ 187
              +     R G R   +       G+++  L  H  S              +   L   
Sbjct: 126 ---SHFVMRRTGTRDITQCTFITKGGRQLIALSNHWPSRSGGAVESAGFRMTAGETLGYW 182

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                  I ++K + +  V  GDFN   +          T + +D          +    
Sbjct: 183 ----HQRIREEKGNDIAVVAFGDFNDDPSDASLRYHANSTRERDDVESSQSAMFYNLTWN 238

Query: 248 N-------------------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS- 287
                                   +    D  ++ ++        +  E     + I + 
Sbjct: 239 YLRQQVVDSVGSARTIYGTLYFNGDANIFDQILVSRSLLNGSSGFAVREETAKIEAIAAM 298

Query: 288 -----------------------RGKRLSDHCPISIDYD 303
                                       SDH P+S+  +
Sbjct: 299 VSHSKNEGPIRFGLSKGDAVKNVNLGGFSDHFPVSVIIE 337


>gi|312870577|ref|ZP_07730692.1| exodeoxyribonuclease III [Lactobacillus oris PB013-T2-3]
 gi|311093892|gb|EFQ52221.1| exodeoxyribonuclease III [Lactobacillus oris PB013-T2-3]
          Length = 275

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 78/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++++     +  +    R       + +    L+ D V +QE          
Sbjct: 1   MKFISWNIDSINAALTGTSTRAGETR------AVLKKISALEPDAVAIQETKLSKNGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   ++   S  +     +       ++      +YP +GA +     G  
Sbjct: 55  KHLQVLADLFPGYQIAWRSSVEPARKGYAGTMYLYRDQYQPTVTYPQIGAPEPMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     ++ +++  +                        L        +   
Sbjct: 114 -----IITLEFHDFFLTEVYTPNSGNGLKRLADREQWDDCYRDYLHQL--------DEQK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F         A 
Sbjct: 161 PVIASGDFNVAHEEIDLAHPANNHHSAGFTDEERSHFGQLLAAGFTDSFRFLHPEEAGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       +   S  +                DH PI
Sbjct: 221 SWWAQRVLTSKQNNSGWRIDYWLVSNRLADRVSSSSMIDSGERR-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 MLEID 274


>gi|119470261|ref|ZP_01613020.1| putative orphan protein [Alteromonadales bacterium TW-7]
 gi|119446433|gb|EAW27708.1| putative orphan protein [Alteromonadales bacterium TW-7]
          Length = 387

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/375 (11%), Positives = 91/375 (24%), Gaps = 80/375 (21%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQY 60
            L    +   A  +  +R+ ++N++  +                      T     + + 
Sbjct: 10  LLTAASLSLNAYASDTIRVATFNVSMDATNYTAKGEPIKSDALVKALTSNTQQIKNIAEI 69

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN------------ 108
            + +  DI+ L E         +    T  +  S  +        S              
Sbjct: 70  IQRVRPDIILLNEFDFVPKEQGIDYFKTHYLAVSQNKQKAVDYPYSYIAPVNTGLATEFD 129

Query: 109 --------------------DIHTAIAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNRRAV 146
                               + H  +A+  K        ++      KD  +       +
Sbjct: 130 LDNDGKKSKVMGDAQGFGFFEGHYGMAILSKYPIDFDKIRTLQTFKYKDMPNAKMPLMPI 189

Query: 147 ----------------------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
                                 ++ V I+ K + VL  H     F    +     +   +
Sbjct: 190 TGENWYNAKEWQALRLSSKSFWDVPVVIDNKAVHVLAPHPTPPVFDGEEDRNGKRNHDEI 249

Query: 185 SQQAQWLKDWITQKKESLV--------PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
              A ++ +      ++           FVI GD N          +    +  N  +  
Sbjct: 250 RLIADYVANADYLYDDNGTKGGLEAQSRFVILGDLNAAPEGDKARLETTDQLLKNPLVNA 309

Query: 237 FPKEKDSRCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
               K +            +     +  +DY +             F  +  NE     +
Sbjct: 310 QFVPKSAGAKQQYELAYAQHFTANWQARVDYVLPSTYGLDIKEGGVFWPVESNEQYRLIK 369

Query: 289 GKRL-SDHCPISIDY 302
            +   SDH  + +D 
Sbjct: 370 DRSASSDHRLVWLDL 384


>gi|116333326|ref|YP_794853.1| exonuclease III [Lactobacillus brevis ATCC 367]
 gi|116098673|gb|ABJ63822.1| Exonuclease III [Lactobacillus brevis ATCC 367]
          Length = 254

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 68/304 (22%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                        +  + L+AD   +QE     A    
Sbjct: 1   MKFISWNVNGLRAIVKKGF---------------VETFQELNADFFGIQETK-LQAGQIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      +S                       +  PL       +   + 
Sbjct: 45  LDLPGYYQYWNYAERKGYSGTALFT-----------------KHQPLNVIYGIDAPEFDH 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +VL  +  +        +             Q L        ++  
Sbjct: 88  EGRAITLEYPD--FYVLTCYTPNSGSGLKRLDFRLGWEHAFLTFIQKL--------DAQK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                              +        F           
Sbjct: 138 PVIFCGDLNVAHTEIDLKNPKTNHHNAGFTDEERAKMTALLAAGYTDTFRYFNPDVTERY 197

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF+  Q     L      + +             SDHCP+ 
Sbjct: 198 SWWSYRFHARDNNAGWRIDYFITSQRLQNHLQDAKILDQI-----------MGSDHCPVE 246

Query: 300 IDYD 303
           +D  
Sbjct: 247 LDVT 250


>gi|116511599|ref|YP_808815.1| exonuclease III [Lactococcus lactis subsp. cremoris SK11]
 gi|116107253|gb|ABJ72393.1| Exonuclease III [Lactococcus lactis subsp. cremoris SK11]
          Length = 285

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 80/311 (25%), Gaps = 62/311 (19%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +SWNI++L+          + +R       + +       D++ +QE    +   K  
Sbjct: 4   KFISWNIDSLNA-----ALTGTSERAALSL-AVVKNLAQAQPDVLAIQETKLPSTGPKKA 57

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   +   +++  S  +     ++   +  K                    A  R 
Sbjct: 58  HLEVLEDLFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRI 117

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + +     +V  ++  +     +  +               L        ++  P
Sbjct: 118 -----ITLEFPDFFVTTVYTPNAQEGLTRLDLRGIWDDNYRNYLTSL--------DAQKP 164

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDS------ 243
             + GDFN                         + +  +        F K          
Sbjct: 165 VFVCGDFNAAYTEIDLANPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRKLHGPVEKFYE 224

Query: 244 -RCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
              +       +            IDY+++       +             +    G+RL
Sbjct: 225 EGRSIYTWFAQRAKTSKLNNSGWRIDYWLVSNRLADAI----------KVSEPLDSGERL 274

Query: 293 SDHCPISIDYD 303
            DH PI ++++
Sbjct: 275 -DHVPILLEFE 284


>gi|32450017|gb|AAH54141.1| Drng-A-prov protein [Xenopus laevis]
          Length = 265

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 87/299 (29%), Gaps = 59/299 (19%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DA 66
           L+     C    +  +R+ S+N+ +  E             +  D   +    + +    
Sbjct: 4   LLLLCALCV-PHSLGLRICSFNVQSFGE-------------SKRDKPAVMNVVRKIISRC 49

Query: 67  DIVFLQEM-GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           DI  L E+  S N V ++                                + +KN+  ++
Sbjct: 50  DITLLMEIKDSSNTVIRLLMAQ----------------------------LNRKNLVSVK 81

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
            +Y     +     A +R    +  +  G ++    I  +      ++          L 
Sbjct: 82  GTYQYKDLQPGDEDAFSREPYVVWFQAPGTEVKEFVIVPQHTTPEAAVREIDELYDVDLD 141

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            + +W          +   F+  GD N   +Y+         +  +   +    + +   
Sbjct: 142 VKQKW----------NSENFIFMGDLNAGCSYVPKKSWKNIRLRNHTEFVWLIGDNNDTT 191

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             +        I   V+ +     ++  S +   +      +  + L  SDH PI +  
Sbjct: 192 VKSSTNCAYDRI--VVVGEKLVSSIVPGSANVFDFMVAYGLTEEQALEVSDHFPIEVRL 248


>gi|228937659|ref|ZP_04100296.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228970548|ref|ZP_04131198.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228977118|ref|ZP_04137519.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228782566|gb|EEM30743.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228789135|gb|EEM37064.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228822033|gb|EEM68024.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326938155|gb|AEA14051.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 263

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 72/269 (26%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   +D+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK-TRKIVSTTIAYNGKDITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L   +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKGQINRLMGRVD----SNKLAFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q         S
Sbjct: 183 EGYEYMMQKGLYDTYGLAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQ---------S 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 KKVHSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|156975999|ref|YP_001446905.1| hypothetical protein VIBHAR_04769 [Vibrio harveyi ATCC BAA-1116]
 gi|156527593|gb|ABU72678.1| hypothetical protein VIBHAR_04769 [Vibrio harveyi ATCC BAA-1116]
          Length = 451

 Score = 72.3 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 86/291 (29%), Gaps = 36/291 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAVA 81
           +++ ++N+  +                +SD        ++     D++ LQE  S +A  
Sbjct: 183 LQVATYNLWMIPS-------------VSSDIAARAAMMEHSLSGYDVLVLQEAFS-SARD 228

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F               +    DS       +    +   +   +        +   A 
Sbjct: 229 PMFDALE----LEYPYQTDVVGGDSAALYDGGVVTLSRYPILETDALVFDHCSGTDCYAD 284

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +  V   ++ NG+   + + HL SF    +          L +         +T++  +
Sbjct: 285 -KGIVYTKIDKNGQIYHIFNTHLASFNTSAAKRLRRLQLGLLRTF-------MLTKQIPA 336

Query: 202 LVPFVIAGDFNRKINYLG-NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-------LRN 253
               + AGDFN   N           T++ +       +E     + N            
Sbjct: 337 DEAVIYAGDFNIDKNSDFMEYFLMLATLEVDPPTYLGYREATFDPSINSYASAKYSGGSQ 396

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +DY ++     +     +  ++     +       LSDH  +   + F
Sbjct: 397 SEYLDYVLVSSEHRRAFENTNTVKLRQRVSEETWGEWHLSDHFSVEGQFVF 447


>gi|323356483|ref|YP_004222879.1| metal-dependent hydrolase [Microbacterium testaceum StLB037]
 gi|323272854|dbj|BAJ72999.1| metal-dependent hydrolase [Microbacterium testaceum StLB037]
          Length = 278

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 71/284 (25%), Gaps = 29/284 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A  + ++S+NI     +    +      R       LR +       ++  QE     A
Sbjct: 10  AAPDLHVMSFNIR----RRFDRMTWPPADRWPMRKQRLRTFLSANRPHLLGSQEAMPDQA 65

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +       +        R  N     +           ++  +V+    P +     +  
Sbjct: 66  LWVQQSLGSAYGRIGLGRGKNRDGEGTPLFYDRDRIEVEEWEQVMLSDTPDVPGSTGWGN 125

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R AV   +           ++     F        +           WL D +  ++
Sbjct: 126 TIPRVAVIAQLRDRATDARFTFVNTHFDAFSRRARRRSAS----------WLHDLVAARE 175

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK--DSRCNANKNLR-NKIP 256
               P +   D N  +        F   +  +       +        N   + R     
Sbjct: 176 ---RPLLFTADVNAHVRSAELAGMFADGLLVDTWAYAPARRTAEWGTFNNYASPRVGARR 232

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ID  +   +     +           D   +  +  SDH P+  
Sbjct: 233 IDALLATPDVGVRAVG---------IDPRPTGTQWPSDHLPVQA 267


>gi|264676398|ref|YP_003276304.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2]
 gi|262206910|gb|ACY31008.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2]
          Length = 267

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 75/275 (27%), Gaps = 62/275 (22%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            + +    D + +QE+ +  +             +     +      +    ++ + V  
Sbjct: 22  AWIEATAPDCICVQEIKAQAS--------DMAGRFEVLAGMKGYFHFAEKKGYSGVGVYT 73

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           ++          +   D+  R      VE   +  G+K  V+  +  S    +  +    
Sbjct: 74  RHEPSDVVVGFDIEEFDAEGRY-----VETRFDTPGRKFSVISAYFPSGSSGELRQEAKF 128

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------YLGNND 222
              + +               ++   FV+ GD N                         D
Sbjct: 129 RFLAKMHSHL--------MHLKAERDFVLCGDINIAHQKEDLKNWRGNQKNSGFLPEERD 180

Query: 223 DFWKTID----PNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNAYK 268
              K +         +  + + +    +A      N+           +DY +       
Sbjct: 181 WMSKLLHKTEAGGGLVDVYRQLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAIAA 240

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ES             +G++ SDH PI+I YD
Sbjct: 241 LARTESI-----------YKGEKFSDHAPITIGYD 264


>gi|57157233|dbj|BAD83646.1| deoxyribonuclease I [Pagrus major]
          Length = 281

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 89/279 (31%), Gaps = 29/279 (10%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKVFPK 86
           +NI +  +++  +               +         DIV +QE+   +  A  ++   
Sbjct: 25  FNIKSFGDKKSSNTT----------LMNIISTIV-HRYDIVLIQEVRDSDLSATKRLMEH 73

Query: 87  -NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            N     +    +++     S+         R++ V V++      G +   +   +R  
Sbjct: 74  VNKGSPQFRYSHIVSEPIGRSSYKERYLFLYREQTVSVVKNYTYDDGCEPCGTDTFSREP 133

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
             ++       +    +  +      +++   +    ++  + +W          +    
Sbjct: 134 FVVMFSSRYSAVKNFVLIPQHTSPDSAVKEVNALYDVVVDVRTRW----------NTNDI 183

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           V+ GDFN   NY+  +D     +  + S       +     +          D  V+  +
Sbjct: 184 VLLGDFNTDCNYVSGSDWQHIRLFTDKSFRWLIGNEVDSTVSQTTN---CAYDRIVVTTD 240

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             K ++  S     +  D   S    L  SDH P+ ++ 
Sbjct: 241 MLKGVLLGSAQVYNFMTDLKLSHSLTLAVSDHYPVEVEL 279


>gi|322392394|ref|ZP_08065855.1| exodeoxyribonuclease [Streptococcus peroris ATCC 700780]
 gi|321144929|gb|EFX40329.1| exodeoxyribonuclease [Streptococcus peroris ATCC 700780]
          Length = 275

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 79/304 (25%), Gaps = 56/304 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + +       + Q     DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQD------VLQTLVAEDADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S   +  R
Sbjct: 55  KHLEVLEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDSEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +                  ++    L        +   
Sbjct: 114 I-----ITLEFDTFFVTQVYTPNAGDGLKRLEERQVWDIKYAEYLAEL--------DKKK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +     + +  +        F           
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNHRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGPRQ-----------DHTPI 269

Query: 299 SIDY 302
            ++ 
Sbjct: 270 VLEI 273


>gi|170693993|ref|ZP_02885149.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
 gi|170141065|gb|EDT09237.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
          Length = 260

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +    +AD++ +QE+         
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWFGEQNADVLCVQEIKCSQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      + +         A    +     +      +G          R
Sbjct: 43  ---DMTPEFLAPHDFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE+   K+ V+ +++ S    +  +                L            
Sbjct: 95  Y-----VELRFGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAQLAR--------ER 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R    
Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          +               R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIASKAKRTEV-----------FRDIKFSDHAPLT 250

Query: 300 IDYD 303
           +DYD
Sbjct: 251 VDYD 254


>gi|28896473|ref|NP_802823.1| 3'-exo-deoxyribonuclease [Streptococcus pyogenes SSI-1]
 gi|28811724|dbj|BAC64656.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes SSI-1]
          Length = 313

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/327 (11%), Positives = 90/327 (27%), Gaps = 57/327 (17%)

Query: 3   RKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +  +++    +    +   + +++L+SWNI++L+        +  + R       +    
Sbjct: 17  KSLIVSFFVTITTRLSVRKRYQMKLISWNIDSLNAALTGESPRALLSR------AVLDTL 70

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
              DADI+ +QE                  ++     +  S  +     +       KN 
Sbjct: 71  VAQDADIIAIQETKLSAKGPTKKHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNT 130

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                ++P +GA  +    G       ++ +  +  +V  ++  +        +      
Sbjct: 131 LNPVITFPEIGAPTTMDAEGR------IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWD 184

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWK 226
              +     L        ++  P +  GD+N               R   +       + 
Sbjct: 185 HKYADYLTEL--------DAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFT 236

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFS 276
            +        F        +       +            IDY++        + +    
Sbjct: 237 NLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRIVDKVKRSEMI 296

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
                +           DH PI +D D
Sbjct: 297 SSGERQ-----------DHTPILLDID 312


>gi|302546099|ref|ZP_07298441.1| endonuclease/exonuclease/phosphatase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302463717|gb|EFL26810.1| endonuclease/exonuclease/phosphatase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 257

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 73/291 (25%), Gaps = 45/291 (15%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
                +      VR++S+NI +L +                D   L +  +  D D+V +
Sbjct: 5   LPASTSGPDGAVVRVLSYNIRSLRD----------------DREALARVIRACDPDVVCV 48

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE   +    K   +                   +     T   +       ++++  +L
Sbjct: 49  QEAPRFFRWRKAVARLARETGLV---------YATGGATATGPMILTSLRAQVERTEDIL 99

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +        R     ++   G       I L       SL      + +    QA  L
Sbjct: 100 LPR--VPGLHRRGFATAVLRFGGGHRDDDGIRLGVVSCHLSL------AAAERYDQAGML 151

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            D +      +   V AGD N + +            D   +     +      +     
Sbjct: 152 LDRVAAL--DVPYAVAAGDINEQPDGRAFRRIAGTLRDGWATEPWGSEHTFDPGDP---- 205

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +  ID                            +  +  +DH P+    
Sbjct: 206 --RRRIDALFASDGIEI----IGCGVPSGLPGVGDADLRAATDHLPVLAAL 250


>gi|159491237|ref|XP_001703579.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158270653|gb|EDO96491.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 598

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 47/321 (14%), Positives = 87/321 (27%), Gaps = 57/321 (17%)

Query: 8   ALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           A +   +P     A      +R+ + N+ +L           +                 
Sbjct: 22  ACLGLTLPAGTGAAFGPPHPLRIATHNMQSLRLPGAARRVAAAALIW-----------AE 70

Query: 64  LDADIVFLQEMG-----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           L  DI+ LQE          A  +      + +  S  ++       S      A  VR+
Sbjct: 71  LRLDIICLQETHWTCRADQAAFEQTLQLIAYELHLSGWKVTGAQWSTSRATAGVAFLVRQ 130

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +       + P L    +   AG R AV L +   G+ I + + +  +     + +    
Sbjct: 131 ELWESSTITAPALSPVPTAMLAG-RLAV-LKLRWGGRSITIANTYFPAASTHAAEQAKRE 188

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR--------------KINYLGNNDDF 224
               L +Q A            +    + AGDFN               +          
Sbjct: 189 LISQLRTQAALS------AAATAGEVVIWAGDFNFVENPALDSSAGPGGRPGDAPLAALL 242

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYN 281
                P    +   +   +RC ++           +D   +   A   +     + +   
Sbjct: 243 RAADQPQMVDMYRHRHPTARCYSHLYRAPVKGGSRLDRIYVSAAAAAAVCHADIALVS-- 300

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                      SDH P  ID 
Sbjct: 301 ----------SSDHRPAFIDL 311


>gi|119026076|ref|YP_909921.1| exodeoxyribonuclease [Bifidobacterium adolescentis ATCC 15703]
 gi|154488848|ref|ZP_02029697.1| hypothetical protein BIFADO_02156 [Bifidobacterium adolescentis
           L2-32]
 gi|118765660|dbj|BAF39839.1| possible exodeoxyribonuclease [Bifidobacterium adolescentis ATCC
           15703]
 gi|154082985|gb|EDN82030.1| hypothetical protein BIFADO_02156 [Bifidobacterium adolescentis
           L2-32]
          Length = 286

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 74/311 (23%), Gaps = 57/311 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVA 81
            + + + N+N +                 +    + Q+A     D+  +QE+ +    + 
Sbjct: 2   TITITTSNVNGIRA---------------AKRKGIEQWAAKNTPDVWCMQEVRAPQNEID 46

Query: 82  KVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +F +  +        + +  ++             + +      + ++      A+D  
Sbjct: 47  PIFDEFGFEYATAGRIADQSGLDRMNEICRIKGRAGVGLLSALPVIDKRYGLPGLAEDVD 106

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S       +E  V+        +                       L      +     +
Sbjct: 107 SGRW----IEADVKTPQGYTVTVVCVYVH-AGNTDDPEKMKQKYRFLDTMLVRMGQLRDE 161

Query: 198 KKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
                   V+ GDFN                             K +   + +       
Sbjct: 162 AAHGGKQAVLCGDFNIAHTPLDIKNAKANEKHAGFLPEERAYVDKWLGELEFVDVMRSLC 221

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           IDY        +       +   +  D   +   R 
Sbjct: 222 GDIQGPYTWWSQRGRAFDNNVGWRIDYQFATPELAE-------TARGFVIDKAPTYDLRW 274

Query: 293 SDHCPISIDYD 303
           SDH P+SI YD
Sbjct: 275 SDHAPLSITYD 285


>gi|262037299|ref|ZP_06010773.1| metal-dependent hydrolase [Leptotrichia goodfellowii F0264]
 gi|261748682|gb|EEY36047.1| metal-dependent hydrolase [Leptotrichia goodfellowii F0264]
          Length = 263

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/297 (10%), Positives = 81/297 (27%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAV 80
           ++L++ N++               +       +L +     D D++ +QE+    +   +
Sbjct: 1   MKLLTINVH-----------AWIEENQDEKMEILAKVIAENDYDVIAMQEVNQSMNSLVL 49

Query: 81  AKVFPKNTWCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            +   ++ +                     +     +     +A+  K+  +    +   
Sbjct: 50  FRAIRQDNYGWVLLDKISKYTDRTYYYHWSNSHIGYDKYDEGLAIITKHKLLDVDEF-YC 108

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               S +   +RR     +E  G+ +     H+      +   +                
Sbjct: 109 TRAQSVNTITSRRINSATIEYKGQIMEFYTCHMNLPTNKEEKMSDN-------------- 154

Query: 192 KDWITQKKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEK----DSRCN 246
              I ++ ++    ++ GDFN   IN   +          +       K+         +
Sbjct: 155 IQRILKRSQTDNLKILMGDFNTDAINSPEDYKMILSQGLYDTYTAAIEKDSGITVGGNID 214

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +    IDY   ++             +             +SDH  + +  D
Sbjct: 215 GWSKNKEDKRIDYIFSNKK---------IKVLSSKVIFNGKNHPVVSDHYGLEVILD 262


>gi|254470152|ref|ZP_05083556.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio
           sp. JE062]
 gi|211960463|gb|EEA95659.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio
           sp. JE062]
          Length = 346

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 72/284 (25%), Gaps = 52/284 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             A+   ++S N+                         L++  +    D++  QE  S  
Sbjct: 111 PEAKSFDVMSLNLLH----------------MQFGKEALQELIEKRQPDLIVFQETASAT 154

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              + F +  +          +           T + V  K      +   + G   +  
Sbjct: 155 PRLQAFLRENYQYAILPPEKKD-----------TDLTVFSKFPLENSKRNLVPGLGFNGY 203

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  +   V +NG+KI +  IH  S               +  +    ++   I + 
Sbjct: 204 I--PREFLSADVNVNGRKIQLYAIHPASP--------RSKRRLNGRTTYVDYVSKHIQKH 253

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +  P ++ GD+N  +                      P+      N          +D
Sbjct: 254 -RTDTPIMVLGDWNTPVWSDTFQKLLADLKLKTTFTSFVPQTTRYFINPFLGKVLGSKVD 312

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    +                   D+       SDH PI    
Sbjct: 313 HITSSEKIIIK--------------DLMIGEDVGSDHFPIFATL 342


>gi|54307508|ref|YP_128528.1| extracellular nuclease [Photobacterium profundum SS9]
 gi|46911928|emb|CAG18726.1| hypothetical extracellular nuclease [Photobacterium profundum SS9]
          Length = 781

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 46/390 (11%), Positives = 103/390 (26%), Gaps = 100/390 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTL--------------- 56
                +   +++ S+N+  L       G  L      +  +D                  
Sbjct: 294 APVEYIGGNIKVASFNVLNLFTSASEVGGDLNATCSDQADADAAKGCNRGAKTLSEFSLQ 353

Query: 57  ---LRQYAKNLDADIVFLQEMGSYNA--------------VAKVFPKNTWCIFYSTERLI 99
              +    K +DADI+ + EM +                 +      + +      +   
Sbjct: 354 RTKIVNALKAMDADILGIMEMENNGFGANSAIANLVTELNLQFNDSADHYAYIEIADEDK 413

Query: 100 NHSKRDSNNDIHTAIAVRKKNV--------RVLQQSYPLLGAKDSFS---RAGNRRAVEL 148
           N  K   ++ I  A+  R   V          + + +      D  +       R ++  
Sbjct: 414 NQGKYLGSDAIMVALIYRPAKVTPADDAQVIRMPEQHITGNNPDGEAKQLDKYQRDSLMQ 473

Query: 149 LVEING-----KKIWVLDIHLKS---FCFLDSLENTYSPSCSLLSQQAQWLK-----DWI 195
             +I G     + + V+  HLKS    C+ D +   Y    + L       +        
Sbjct: 474 TFKIVGTKKKKETLSVVVNHLKSKGSGCYEDWINGEYEDDPADLQGHCNAFRVSGAMTLS 533

Query: 196 TQKKESLVPFVIAGDFNRK--------INYLGNNDDFWKTIDPNDS-------------- 233
            + K+     ++ GD N          +          K +  + +              
Sbjct: 534 QELKKVKGDLLVMGDMNAYGMEDPVRVLTDYKPKKAERKIMSASGTSIAGQPLHATGIEA 593

Query: 234 ------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                 +    +       +         +D+ + +++  K ++      I   E+ +  
Sbjct: 594 GKGLGLINLASEWHGDDSYSYSYGGELGSLDHALANKSLKKKVVGIEDWHINSVENSLFE 653

Query: 288 RG-------------KRLSDHCPISIDYDF 304
                             SDH P+ I   +
Sbjct: 654 YSGKYSGSLAKSEGPYSASDHDPVIISLKY 683


>gi|146318051|ref|YP_001197763.1| metal-dependent hydrolase [Streptococcus suis 05ZYH33]
 gi|253751249|ref|YP_003024390.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           suis SC84]
 gi|253753150|ref|YP_003026290.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           suis P1/7]
 gi|253754973|ref|YP_003028113.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           suis BM407]
 gi|145688857|gb|ABP89363.1| Metal-dependent hydrolase [Streptococcus suis 05ZYH33]
 gi|251815538|emb|CAZ51120.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           suis SC84]
 gi|251817437|emb|CAZ55177.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           suis BM407]
 gi|251819395|emb|CAR44833.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           suis P1/7]
 gi|292557816|gb|ADE30817.1| phosphatase [Streptococcus suis GZ1]
 gi|319757526|gb|ADV69468.1| metal-dependent hydrolase [Streptococcus suis JS14]
          Length = 263

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 81/298 (27%), Gaps = 54/298 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79
           ++L++ N++  L             +R      +L Q       D++ LQE+    + + 
Sbjct: 1   MKLLTINVHAWL------------EERQDEKLDVLAQTIAEKAYDVIALQEVNQLITADL 48

Query: 80  VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           V K    + + +                   +     +     IA   K        +  
Sbjct: 49  VTKDLKADNYGLILLEKLRTLGQFDYSYYWSNSHIGYDKYEEGIAFLTKLPVYEVDQF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                S     +R+ + L V    + I +   H+      +  +     +    +     
Sbjct: 108 CSQNKSIDSILSRKIMGLTVFYQDQLIDLYSCHINLPGSEEEDQLDNIRTIVERT----- 162

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
                     +    ++ GDFN          +    +   DS     ++          
Sbjct: 163 ---------GNRRFKILMGDFNTDAFSDREAYEAITELGLYDSYNLAMEKDQGITVEKAI 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +       +  +DY  ++Q          F+               +SDH  + ++ +
Sbjct: 214 DGWAGHSQEKRLDYIFLNQKKEVLSSLVIFNGENRPI---------ISDHFGVEVEIN 262


>gi|295396429|ref|ZP_06806591.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970731|gb|EFG46644.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030]
          Length = 272

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 78/305 (25%), Gaps = 67/305 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + S N+N +       +                 +       I+ LQE+ + N +A  
Sbjct: 2   ITVASVNVNGIRAAMRKGMEP---------------WFNQNTPQILTLQEVRAANDIAYS 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      YS +                 +AV  +      +    +G  D +     R
Sbjct: 47  VMEPFGGSAYSADAEA---------KGRAGVAVVSQTPAREVR----IGIGDEYFAGAGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                    +G  + V+  ++ S       ++        + ++   L            
Sbjct: 94  WIECDYDLDDGSTLTVVSAYVHSGEAGTPKQDDKYRFLDRMKERLPQLARHADYA----- 148

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
             ++ GD N     L   +                 F +       +    K        
Sbjct: 149 --LVTGDLNVGHTELDIKNWKANQKKAGFLPEERAYFDEFFGDLGWIDVHRKLSGEVPGP 206

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY +   N  +                  S G+R SDH P+
Sbjct: 207 YTWWSMRGKAFDNDAGWRIDYHMATPNLAELASNAQVH-------RAASWGERWSDHAPL 259

Query: 299 SIDYD 303
            IDYD
Sbjct: 260 VIDYD 264


>gi|268679182|ref|YP_003303613.1| exodeoxyribonuclease III [Sulfurospirillum deleyianum DSM 6946]
 gi|268617213|gb|ACZ11578.1| exodeoxyribonuclease III [Sulfurospirillum deleyianum DSM 6946]
          Length = 254

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 84/306 (27%), Gaps = 79/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           ++L+SWN+N +      + +                +      D++ LQE+   ++    
Sbjct: 1   MKLISWNVNGIRAVANKNAF---------------SWVDEEKPDVLCLQEIKAEAHQIPE 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F     C   ++     +S   S +          +       ++ +           
Sbjct: 46  PLFTHPFTCKHINSATKKGYSGTMSFS---------TRLFDTTNTAWHI------DHTKE 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +E +   + + +++  +    +          S      + L+         
Sbjct: 91  GRI-----LEHHFGDVVLFNVYFPNGQQSEERLRHKMQFYSDFLAHTEALRTM------- 138

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               +I GD N                    L     +  T+     L  F +   +  +
Sbjct: 139 GKGIIICGDVNTAHREIDLANPKANEDISGFLPIERAWIDTLLAKGYLDTFREVHGNVKD 198

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A      +           IDYF + +   K L        +           + SDHCP
Sbjct: 199 AYSWWSYRSGARERNVGWRIDYFFISKELQKNLKDAFILPHI-----------QGSDHCP 247

Query: 298 ISIDYD 303
           + I+  
Sbjct: 248 VGIEIT 253


>gi|289168236|ref|YP_003446505.1| hypothetical protein smi_1403 [Streptococcus mitis B6]
 gi|288907803|emb|CBJ22643.1| conserved hypothetical protein [Streptococcus mitis B6]
          Length = 271

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 76/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              +  L +     D D++  QE+       +V   + +    +                
Sbjct: 17  EEKFQFLLEDILEKDYDLICFQEINQEITSPEVEVNDFYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  +S    +
Sbjct: 239 KELA---------VEKLHVVFDGNKSPQVSDHYGLSAILSW 270


>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
 gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 925

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 75/288 (26%), Gaps = 43/288 (14%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+    VR+++WN         +                      + + D++ LQE+   
Sbjct: 116 AAGGDNVRVLTWNTLWDRYDADLIDSAGRRPLLLRALR-------DAEVDVIALQEVE-- 166

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A+  +     W     T       +    +     + +  +        + L   K   
Sbjct: 167 AALLAMLLSEPWVRAEWTLGSDPRGR----DVAECGLLLLSRLPVREAAFHALGPHK--- 219

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                     ++VE   + + V   HL S    D                   L      
Sbjct: 220 ------AVASVVVEAGQRPLVVAATHLSSDHSADGAGRRT-----------AELARIAEG 262

Query: 198 KKESLVPFVIAGDFNRKINYL----GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                   V+ GDFN   +      G  D + +T  P+D+   F    +     +     
Sbjct: 263 FAALDAGLVLLGDFNDGGDTPQVTLGMRDAWSETHGPDDATPTFDPVANPLAAVSSLTGR 322

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +D  ++                    D     G  +SDH  +  +
Sbjct: 323 ASRLDRVLVRGPGLA------VRSAELYGDTPSPDGLFVSDHYGVRAE 364


>gi|311114963|ref|YP_003986184.1| exodeoxyribonuclease III [Gardnerella vaginalis ATCC 14019]
 gi|310946457|gb|ADP39161.1| exodeoxyribonuclease III [Gardnerella vaginalis ATCC 14019]
          Length = 290

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/279 (11%), Positives = 70/279 (25%), Gaps = 44/279 (15%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-------ND 109
           +  + ++   D+  +QE+ +              ++ S       + R  +         
Sbjct: 23  MLDWVQDHTPDVWCMQEVRAPQDAIDPIMSKIKDLYTSKSGESGQNDRRFSVTNQICEIK 82

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +A+      V Q+      ++D  S    R     +    G  I V  +++ +   
Sbjct: 83  GRAGVALVTTLPVVEQRYGLPGLSEDVDS---GRWVETDVHTPQGYDITVASVYVHAGNV 139

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------- 216
            D            L    + L +            ++ GDFN                 
Sbjct: 140 DD--PQKMQQKFRFLDTMLKRLGELRDIAASGGNQAILCGDFNIAHTPLDIKNAKANEKS 197

Query: 217 ---YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQ 264
                       + I+  + +                   +           +DY     
Sbjct: 198 AGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAFDNNVGWRLDYQFATP 257

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +           +  D  +S   R SDH  ++I Y+
Sbjct: 258 EIAETACG-------FVIDRAQSYDSRWSDHAALNIKYN 289


>gi|281491287|ref|YP_003353267.1| exodeoxyribonuclease III [Lactococcus lactis subsp. lactis KF147]
 gi|281375028|gb|ADA64546.1| Exodeoxyribonuclease III [Lactococcus lactis subsp. lactis KF147]
          Length = 334

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 84/311 (27%), Gaps = 62/311 (19%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +SWNI++L+          + +R       + +       D++ +QE    +   K  
Sbjct: 53  KFISWNIDSLNA-----ALTGTSERAALSL-AVVKNLAQAQPDVLAIQETKLPSTGPKKA 106

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   +   +++  S  +     ++   +  K                    A  R 
Sbjct: 107 HLEVLEELFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRI 166

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + +     +V  ++  +     +  +               L        ++  P
Sbjct: 167 -----ITLEFPDFFVTTVYTPNAQEGLTRLDLRGIWDDNYRNYLTSL--------DAQKP 213

Query: 205 FVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIR------FPKEKD 242
               GDFN     +                   + F + ++   +           K  +
Sbjct: 214 VFACGDFNAAYTEIDLANPRANHNSAGFTDQEREKFGQLLEAGFTDTFRKLHGQVEKFYE 273

Query: 243 SRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
              +       +            IDY+++     + +             +    G+RL
Sbjct: 274 EGRSIYTWFAQRAKTSKLNNSGWRIDYWLVSNRLAQAV----------KVSEPLDSGERL 323

Query: 293 SDHCPISIDYD 303
            DH PI ++++
Sbjct: 324 -DHVPILLEFE 333


>gi|16904254|gb|AAL30835.1|AF440398_3 DNA lyase-like protein [Mycosphaerella graminicola]
          Length = 594

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 85/337 (25%), Gaps = 77/337 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +RL +WN+N +        W N+       +  +    ++   DIV +QE  +   +   
Sbjct: 1   MRLTTWNVNGIRNPFSYPPWNNTRS-----FKSMFDILES---DIVVMQELKIQKKDLRD 52

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQ---------QSYPLL 131
            +   + W  ++S  +    +S         T   +R +   +           +  P  
Sbjct: 53  DMVLVDGWDCYFSLPKYKKGYSGVGIYTRNATCAPIRAEEGLLGVLQSPSGTPYRDLPES 112

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQAQ 189
            +   +  A     + +       +   + +   +F          +        S    
Sbjct: 113 ESIGGYPSAFQVAELGVDPAALDAEGRCVIVEFPAFVLFGVYVPANTSGLQDAFRSGFFL 172

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINY---------------------LGNNDDFWKTI 228
            L   I          V+ GD N   +                       G N   +  +
Sbjct: 173 ALDCRIRNLMRQGKRVVLVGDLNVTRHEIDSAGHLEDIRKRNATHEDIVSGPNRRIFNQL 232

Query: 229 -------------DPNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQN 265
                             L    +           +   K           ID+ ++   
Sbjct: 233 LTDGEVIGERDEGRDAGVLWDTTRGFHPTRRGMYTHWDTKKNARPGNSGSRIDFVLVADV 292

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              ++   +              G   SDHCP+  D+
Sbjct: 293 MQSWVKDANIQ-----------EGLLGSDHCPVYADF 318


>gi|21732296|emb|CAD38538.1| hypothetical protein [Homo sapiens]
          Length = 488

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 76/319 (23%), Gaps = 43/319 (13%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 174 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 233

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 234 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 293

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 294 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 353

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPN 231
           L          ++      +P +  GDFN   +               + D      +  
Sbjct: 354 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 408

Query: 232 DSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDI 285
            ++      K           N        +DY  +D        +    S         
Sbjct: 409 CNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQA 468

Query: 286 KSRGKRLSDHCPISIDYDF 304
                  SDH  +  D  +
Sbjct: 469 LPSVSHPSDHIALVCDLKW 487


>gi|54696842|gb|AAV38793.1| deoxyribonuclease I-like 1 [Homo sapiens]
 gi|61355625|gb|AAX41159.1| deoxyribonuclease I-like 1 [synthetic construct]
          Length = 302

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F  +      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181
                     +       R        +       + ++ +H         L   Y    
Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +                      ++ GDFN     L         +           + 
Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +              +   +  +     L   +  +   +    +     +SDH P+ ++
Sbjct: 214 EDTTVRASTHCTYDRV--VLHGERCRSLLHTAAVFDFPTSFQLTEEEALNISDHYPVEVE 271

Query: 302 Y 302
            
Sbjct: 272 L 272


>gi|56477309|ref|YP_158898.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1]
 gi|56313352|emb|CAI07997.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1]
          Length = 260

 Score = 72.3 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 85/307 (27%), Gaps = 76/307 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +    G                    +    +AD V +QE+       K 
Sbjct: 2   LRVITLNLNGVRSAVGKGF---------------LDWLATQNADAVCVQEL-------KA 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +    I H         ++ + +  +           +   D+  R    
Sbjct: 40  QAGDLTGAVRTPNGYIGHFHHA-EKKGYSGVGLYARRPPDRIVEGLGIADIDAEGRF--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++++   + V+ ++L S    +  +                L++          
Sbjct: 96  ------LQLDFGPLSVVSLYLPSGSSSEERQQVKFGFMERFLPHLATLRN-------CGR 142

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPK-EKDSRCN 246
             ++ GD+N                           F + ++    +  + +   D+   
Sbjct: 143 EIIVCGDWNIAHREIDLKNWKSNQKNSGFLPEERAWFSRVLEEQAWVDVYRRLYPDAGGE 202

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           +DY +            +             + +R SDH P
Sbjct: 203 GYTWWSNRGQAWAKNVGWRLDYQIATPGIAATAKSAAV-----------YKAERFSDHAP 251

Query: 298 ISIDYDF 304
           +++DYDF
Sbjct: 252 LAVDYDF 258


>gi|322374633|ref|ZP_08049147.1| RgfB protein [Streptococcus sp. C300]
 gi|321280133|gb|EFX57172.1| RgfB protein [Streptococcus sp. C300]
          Length = 271

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 74/281 (26%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L Q   + D D++  QE+       +V   N +    S                
Sbjct: 17  EEKFQILLQDILDKDYDLICFQEINQEMTSPEVEVNNHYQALPSAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LAEKGKNYYWTWAYNHVGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ GK++ +  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETEVEGKELALASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLILA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     +   S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                          ++SDH  ++    +
Sbjct: 239 KEL---------EVESLQVVFDGQNSPQVSDHYGLNAVLTW 270


>gi|326798804|ref|YP_004316623.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21]
 gi|326549568|gb|ADZ77953.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21]
          Length = 255

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 82/306 (26%), Gaps = 78/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80
           ++++++N+N                R       +  + K  DADIV LQE+         
Sbjct: 1   MKIITYNVNG--------------IRAAMRKDWI-NWLKESDADIVCLQEIKASPDQLID 45

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +     +  ++       +S                  +      +   G        
Sbjct: 46  LLLIEGLGYEHYWFPAEKKGYSGTA--------------ILTKRSPKHVEYGCGIEAYDK 91

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R      +  + +++ ++  +  S    D+ ++          Q     + +  +   
Sbjct: 92  EGRI-----IRADFEELSIISAYFPSGSSGDARQD-------FKYQFLDDFRRYSDKLLT 139

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCN 246
                VI+GD+N     +  ++                      N   I   +      +
Sbjct: 140 EFPSLVISGDYNICHRAIDIHNPKSNANSSGFLPEERAWMESFINSGYIDTFRHLHPEPH 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY +  +     + Q +      +           SDHCP
Sbjct: 200 QYTWWSYRANARAKNLGWRIDYNMASRALEGRIKQAAILTDALH-----------SDHCP 248

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 249 VFLELD 254


>gi|154148197|ref|YP_001407152.1| exodeoxyribonuclease III [Campylobacter hominis ATCC BAA-381]
 gi|153804206|gb|ABS51213.1| exodeoxyribonuclease III [Campylobacter hominis ATCC BAA-381]
          Length = 251

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 78/303 (25%), Gaps = 76/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L              R       L  +      D + LQE+         
Sbjct: 1   MKLISWNVNGL--------------RACVKNDALG-WITQEKPDFLALQEIK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++            N          ++ +A          ++      +         
Sbjct: 38  VSEDKIPSEIYNLGFENLDVNSGEKAGYSGVASLHNLKCATFKNLFFQENEGR------- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +++ +  +I + +I+  +    ++  N               L       K+   
Sbjct: 91  -----VLQHDFNEISLFNIYFPNGQKDENRLNFKMEFYDKFLIYLDKL-------KKQGR 138

Query: 204 PFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSLIRFPKEKDSRCNA-------NK 249
             +I GD N     +   +    +       I+                 A         
Sbjct: 139 KIIICGDVNTAHREIDLKNPKSNSDRSGFLPIERAWIDKLLSHGFVDTFRAINGDKIAYS 198

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYF + ++  + L      +             + SDHCP+ I
Sbjct: 199 WWSYRFNARAKNAGWRIDYFFISEDLRENLTNAFILD-----------DIKGSDHCPVGI 247

Query: 301 DYD 303
           + +
Sbjct: 248 EIN 250


>gi|313202195|ref|YP_004040853.1| exodeoxyribonuclease III xth [Methylovorus sp. MP688]
 gi|312441511|gb|ADQ85617.1| exodeoxyribonuclease III Xth [Methylovorus sp. MP688]
          Length = 260

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 84/306 (27%), Gaps = 80/306 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VAK 82
           R++S N+N +        +                + +  +ADIV +QE+ +  A    +
Sbjct: 5   RIISANLNGIRSAANKGFYP---------------WLQQQNADIVCMQELKAQLADMTPE 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     +  ++       +S                     +Q    ++G   +   A  
Sbjct: 50  MLNPEGYFGYFHYAEKKGYSGVGIYTR--------------VQPDAVIVGLGIADIDAEG 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +E+    + V+ ++L S    +  +       +      + L+        + 
Sbjct: 96  RY-----LELQFGNLSVVSLYLPSGSSGEERQAFKFSVMTRFLVHLEALRA-------AG 143

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              VI GD+N                                D    +  +        +
Sbjct: 144 RDVVICGDWNIAHKEADLKNWKGNKKNSGFLPEERAWLTDLFDRVGWVDVYRVLHPDTTD 203

Query: 247 A-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  N+           IDY +   +     I  S             + +R SDH 
Sbjct: 204 ECYTWWSNRGQAWAKNVGWRIDYQIATPDFAAKAIAASI-----------YKLERFSDHA 252

Query: 297 PISIDY 302
           P+ IDY
Sbjct: 253 PLIIDY 258


>gi|91781453|ref|YP_556659.1| exodeoxyribonucleaseiii xth [Burkholderia xenovorans LB400]
 gi|91685407|gb|ABE28607.1| ExodeoxyribonucleaseIII xth [Burkholderia xenovorans LB400]
          Length = 259

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 76/304 (25%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +     AD++ +QE+         
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWFGEQKADVLCVQEIKCSQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      + +         A    +     +      +G          R
Sbjct: 43  ---DMTPEFMAPHDFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE+   K+ V+ +++ S    D  +                L            
Sbjct: 95  Y-----VELRFGKLSVISVYVPSGSSGDERQQAKYRFMDEFMPHLAELAQ--------ER 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R    
Sbjct: 142 EVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          +               R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIASKAKRTDV-----------FRDIKFSDHAPLT 250

Query: 300 IDYD 303
           +DYD
Sbjct: 251 VDYD 254


>gi|300313958|ref|YP_003778050.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1]
 gi|300076743|gb|ADJ66142.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1]
          Length = 258

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 77/271 (28%), Gaps = 61/271 (22%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           ++ +    D V +QE+ +  A       +    F +    + H    +    ++ + V  
Sbjct: 22  EWLQKEAPDFVCVQELKAQAA-------DMTEQFLAPAGYVGH-FHYAQKKGYSGVGVYS 73

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +      +    +G  ++      R      VE +   + V+ ++  S    +  +    
Sbjct: 74  RRQPDSVR----IGFGNTEFDDEGRY-----VECDYGDLTVISLYAPSGSSSEERQEAK- 123

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNND 222
                  +  +     + + ++S    VI GD+N                          
Sbjct: 124 ------FRFMEAFLPHLMELEKSGREVVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERA 177

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
              +  D    +  + +        A     N+           IDY V         + 
Sbjct: 178 WMTRIFDQLGLVDVYRRLHPETTGEAYTWWSNRGQAWANNVGWRIDYHVSTPGIAAKAVS 237

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +             + +R SDH P+++ Y 
Sbjct: 238 AAI-----------YKEQRFSDHAPLTVVYS 257


>gi|300723413|ref|YP_003712716.1| exonuclease III [Xenorhabdus nematophila ATCC 19061]
 gi|297629933|emb|CBJ90553.1| exonuclease III [Xenorhabdus nematophila ATCC 19061]
          Length = 277

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 71/282 (25%), Gaps = 66/282 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE+       ++
Sbjct: 1   MKFVSFNINGL----------------RARPHQLAAIVEQHRPDVIGLQEI---KVHDEM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP             + +         H  +A+  +   V  +        D+      R
Sbjct: 42  FP-------LEEINKLGYHVFYHGQKSHYGVALLTRQKPVDVRKGFPTDGDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +   +E     + V++       F       +        +  Q L+ ++        
Sbjct: 90  RIIMADLETPLGLLTVIN-----GYFPQGESRDHPVKFPAKEKFYQDLQSYLGNNHSPES 144

Query: 204 PFVIAGDFNRKINYL---------------------GNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GD N                               ++ + +     +  F  +  
Sbjct: 145 NILIMGDMNISPTDSDIGIGENNQKRWLKTGKCSFLPEEREWMERLKNWGFIDTFRFQYP 204

Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESF 275
              +       +           ID  +         +Q S 
Sbjct: 205 EANDQFSWFDYRSKGFDDNRGLRIDLLLASHWLKGVSLQVSI 246


>gi|226955352|gb|ACO95347.1| DNase X (predicted) [Dasypus novemcinctus]
          Length = 305

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/287 (9%), Positives = 71/287 (24%), Gaps = 33/287 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +  R+ ++N   L+          +          L +       DI  LQE+   +  
Sbjct: 16  TEAFRICAFNAQRLTL---------AKVAREHVLDTLVRILARC--DITVLQEVVDSSGS 64

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA-KDSFSR 139
           A          F   +    +    S+    +    +   +    ++  L          
Sbjct: 65  AIPLLIRELNRF---DDSGPYEHLSSSPLGRSTYMEKYVYIYRSHKTQVLQSYLYKDLDD 121

Query: 140 AGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              R        +  K    + ++ +H         L   Y     +             
Sbjct: 122 LFAREPFVAKFTLPSKVLPSLVLVPLHTTPKAVDQELNALYDVFLEVSQLW--------- 172

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                    ++ GDFN     L         +   +       +++     +        
Sbjct: 173 ----PGEDVILLGDFNADCASLTKKRLGELALRTQEGFHWVIGDREDTTVRSSTHCAYDR 228

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           I   +  +     +      +   +    + +   +SDH P+ ++ +
Sbjct: 229 I--VLYGERCPSLVRAAGAFDFPGSFQLTEEQALAISDHYPVEVELN 273


>gi|256833418|ref|YP_003162145.1| Endonuclease/exonuclease/phosphatase [Jonesia denitrificans DSM
           20603]
 gi|256686949|gb|ACV09842.1| Endonuclease/exonuclease/phosphatase [Jonesia denitrificans DSM
           20603]
          Length = 260

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 76/283 (26%), Gaps = 42/283 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +Q++R+ S+N+   +                +D   L Q  KNLDAD++ LQE       
Sbjct: 16  SQRLRVASYNVKGFA----------------ADRRALWQVLKNLDADVLALQEPPRSFQG 59

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                     +         +        +  A  +    V    +  P  G    + + 
Sbjct: 60  PARLRALAHSLHMECVVPGGYPFGGVTTALLVADRISSSVVAAGARVLPW-GLPQWWPQL 118

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +R           ++ +              L    +            + +W      
Sbjct: 119 VDRP------SWPSRRGFSWVDVGNVVVVSAHLGLNPAERVRHGRIIMDAVNEW------ 166

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++AGD N +                 D+  R             + R +  ID  
Sbjct: 167 GSERTIVAGDLNEEPGGPV---WELCDSLLPDARPRALSASPDVAVTFPSHRARRRIDSI 223

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +   A  +    SF           +     SDH P+ I+ D
Sbjct: 224 FVPSRAVVW----SFEV------RAGAAVSAASDHRPVVIEVD 256


>gi|322390094|ref|ZP_08063629.1| RgfB protein [Streptococcus parasanguinis ATCC 903]
 gi|321143221|gb|EFX38664.1| RgfB protein [Streptococcus parasanguinis ATCC 903]
          Length = 270

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 74/283 (26%), Gaps = 54/283 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +     +  L++       D++  QE+    A   V     +    S             
Sbjct: 14  ENAQQKFETLKEQILEAQYDVICFQEVNQEMASEVVKTDEYYQALPSAVAIHKDHFVRVL 73

Query: 96  ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 + ++  +AV  +    L+    L+   D  +    RR 
Sbjct: 74  VEELAAQGLHYYWTWAYNHIGYDHLNEGVAVLSRQP--LKADEILVSNMDDPTDYHTRRV 131

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                 ++GK+I V  +HL    + D       P       Q                PF
Sbjct: 132 AVAHTSVDGKEIAVASVHL---SWWDKGFQFEWPRIEKYFSQV-------------GKPF 175

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYF 260
           ++AGDFN      G       ++   DS I               +   + +  + IDY 
Sbjct: 176 ILAGDFNNPAGQEGYETILSSSLKLQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYV 235

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                         +     +          +SDH  +  +  
Sbjct: 236 FASPE---------WDIQRLHVIFDDQNKPHVSDHYGLEAELS 269


>gi|291548571|emb|CBL24833.1| Metal-dependent hydrolase [Ruminococcus torques L2-14]
          Length = 284

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 80/316 (25%), Gaps = 69/316 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L++ N ++L E                      +       D+V LQE+    +   +
Sbjct: 1   MKLMTLNTHSLVESS-----------YEEKKEKFIETLIAEQPDVVALQEVNQTASAGII 49

Query: 84  --FPKNTWCIFY-----------------------STERLINHSKRDSNNDIHTAIAVRK 118
                  +                                   S +         +A+  
Sbjct: 50  PDVMLAGYKRCMDFGLPVREDNHAKEVVEALREKDVYYYWTWLSAKIGYGKYDEGMALLS 109

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K   +  + + L+   D +     R+ + +  E +    + +                ++
Sbjct: 110 KKPIMRVKQF-LISQTDDYDNWKTRKILGMQTEGSDDIFFTVH------------MGWWN 156

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                L +Q + ++      ++      + GDFN   N      +        DS     
Sbjct: 157 DEEEPLKKQWEKMEKLTKSLEKKDRTIWLMGDFNSLDNVKQEGYELICESGWKDSYCLAE 216

Query: 239 KEKDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           ++        +    +             +DY   +        +   +   Y       
Sbjct: 217 QKDSGVTVEEEIDGWRDGEGGGAVKDAKRLDYIFCNTQKKVKSSKVVCNGKNYPV----- 271

Query: 288 RGKRLSDHCPISIDYD 303
               +SDH  + I+ +
Sbjct: 272 ----VSDHYGVIIEVE 283


>gi|302419937|ref|XP_003007799.1| DNA-(apurinic or apyrimidinic site) lyase [Verticillium albo-atrum
           VaMs.102]
 gi|261353450|gb|EEY15878.1| DNA-(apurinic or apyrimidinic site) lyase [Verticillium albo-atrum
           VaMs.102]
          Length = 334

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/338 (11%), Positives = 80/338 (23%), Gaps = 80/338 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
           R+ +WN+N +    G   W     R    +  +    +   ADI+  QE  +   +    
Sbjct: 3   RITTWNVNGIRNPFGYQPW-----REKRTFEAMFDILE---ADIIIFQETKIQRKDLKDD 54

Query: 83  VFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +     W +++S    +   +S         T   +R +         P    K      
Sbjct: 55  MVLIPGWDVYFSLPKYKKAGYSGVVIYTRNATCCPIRAEEGIFGVLCPPDSSTKFRDLPK 114

Query: 141 GNRR------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
             +               E  ++  G+ + +L+          S  N             
Sbjct: 115 EQQIGGYPTAEQLSSDIDEATLDSEGRCV-ILEFPAFVLIGTYSPANRDESRQEFRLGYL 173

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINY----------------------LGNNDDFWK 226
             L   +     +    ++ GD N   +                       + +   F +
Sbjct: 174 SALDARVRNLVAAGKQVILTGDLNVSRSEIDTINLSEQLRKEDMTMDDWMAIPSRRLFNQ 233

Query: 227 TIDPNDSLIRFPKEK----------------------DSRCNANKNLRNKIPIDYFVMDQ 264
            +            +                             +   N   IDY +   
Sbjct: 234 LLFEGQVRGDRDPGREQPVLWDICRCFHPDRKGMFTCWDTKRNTRPANNGARIDYLLCSA 293

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + I  +              G   SDHCP+    
Sbjct: 294 GIKDWFIDSNIQ-----------EGLHGSDHCPVYGTL 320


>gi|226944569|ref|YP_002799642.1| Endonuclease/exonuclease/phosphatase [Azotobacter vinelandii DJ]
 gi|226719496|gb|ACO78667.1| Endonuclease/exonuclease/phosphatase [Azotobacter vinelandii DJ]
          Length = 276

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 84/287 (29%), Gaps = 53/287 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSY 77
             + +++ N +                        LR+  +++ AD+VFLQE+      +
Sbjct: 33  DSLHILTVNTHKGFTALNRRF----------ILHELREAVRDVSADLVFLQEVLGTHERH 82

Query: 78  NAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               + +P+     F +     +  + +     D     AV  K      ++  +     
Sbjct: 83  ARRHRDWPETPHYEFLADSMWGDFAYGRNAVYPDGDHGNAVLSKYPIQRHRNLDISVPG- 141

Query: 136 SFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  R  +   +E+ G+  +  + +HL                 S   +Q   L + 
Sbjct: 142 ----PERRGLLHCELEVPGQPEVHAICVHLGLL-------------ESHRQKQLGLLCEL 184

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I     +    ++AGDFN               +     +  F         +       
Sbjct: 185 IGS-LPAQARILVAGDFNDWRLRASAR------LRDCGLIEVFEHSHGRCARSFPARLPL 237

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           + +D   +       L       + +      +    LSDH P++ +
Sbjct: 238 LRLDRIYVRN-----LDPLHARVLSH------TPWPHLSDHLPLAAE 273


>gi|259482425|tpe|CBF76897.1| TPA: DNA lyase Apn2 (AFU_orthologue; AFUA_3G06180) [Aspergillus
           nidulans FGSC A4]
          Length = 612

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/338 (11%), Positives = 81/338 (23%), Gaps = 81/338 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
            R+ +WN        G++ +     R+T  +  +    +   ADIV +QE  +   +   
Sbjct: 3   FRITTWN--------GLNPFSYEPWRSTRTFESMFDILE---ADIVVVQETKIQRKDLRD 51

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR----------KKNVRVLQQSYPL 130
            +     W  ++S  +    +S         T   +R            N  V  +  P 
Sbjct: 52  DMVLVPGWDCYFSLPKVKKGYSGVAIYTRNATCAPIRAEEGLTGTLCPPNSLVSFRDLPE 111

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQA 188
                 +        ++L  E    +   + +   +F  +                    
Sbjct: 112 DQQIGGYPTIEQLSKLKLDAETLDSEGRCVILEFPAFVLIGLYCPANRDESRDAFRQNFL 171

Query: 189 QWLKDWITQKKESLVPFVIAGDFN----------------------RKINYLGNNDDFWK 226
             +   +           + GD N                                 F +
Sbjct: 172 DLMDARVRNLVALGKRVFVTGDINISRGEIDAAHAAENIKKGVTTEDDFVSAPARRLFNQ 231

Query: 227 TIDPNDSLIRFPKEKDSR-----CNANKNLR-----------------NKIPIDYFVMDQ 264
            +     +    + ++       C +    R                     IDY +   
Sbjct: 232 LLIDGKVVGDRDEGREQPVLFDICRSFHPKRKGMYTCWEQRINARPGNYGSRIDYVLCSL 291

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   +    +              G   SDHCP+   +
Sbjct: 292 DMKDWFFDSNIQ-----------EGLMGSDHCPVYAVF 318


>gi|169595280|ref|XP_001791064.1| hypothetical protein SNOG_00377 [Phaeosphaeria nodorum SN15]
 gi|111070752|gb|EAT91872.1| hypothetical protein SNOG_00377 [Phaeosphaeria nodorum SN15]
          Length = 635

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 77/336 (22%), Gaps = 78/336 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           VR+ +WN+N +    G   W          +  +    +   AD+V +QE  +   +   
Sbjct: 2   VRITTWNVNGIRNPFGYKPWSE-----KRTFNAMFDILE---ADVVVMQELKIQRKDLTD 53

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK------ 134
            +     W  ++S  +    +S             +R +   +     P           
Sbjct: 54  DMVLVPGWDCYFSLPKHKKGYSGVGIYTRQSVCAPIRAEEGLLGVLCPPGSTTPYRELPQ 113

Query: 135 DSFSRAGNRRAVELLVEINGKKIW------VLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           D+        A    + ++   +       V++        + S  N+            
Sbjct: 114 DASIGGYPTAAQVADLGVDPAALDAEGRCLVIEFPAFVLFGVYSPANSNGLRDDFRYGFL 173

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKIN---------------------YLGNNDDFWKT 227
             L   I          ++ GD N   +                         N   +  
Sbjct: 174 TALDTRIRNLNNMGKNVILTGDLNVSRDLIDTARAEDSMRSEGMTHTEYLSTPNRRVFNQ 233

Query: 228 IDPND--------------SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQ 264
           +  N                     +    R     +               ID+ +   
Sbjct: 234 LLMNGQVPGERDEGREAPVLYDLCREFHPDREGMYTHWEQKINARPGNFGSRIDFVLCSI 293

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +                   G   SDHCP+  
Sbjct: 294 AIKDWFKDSDIQ-----------EGLMGSDHCPVYA 318


>gi|304317722|ref|YP_003852867.1| endonuclease/exonuclease/phosphatase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779224|gb|ADL69783.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 248

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 74/287 (25%), Gaps = 47/287 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------S 76
            + +++WNI     ++G      +      +   +    K   A IV LQE+        
Sbjct: 2   TINILTWNIKAGQNKDGGYPDPKT-----ENLDKIADEIKTSGASIVCLQEVDAYTIRSG 56

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            N     +  N       T     +    + N  +   A+             L      
Sbjct: 57  TNIHQAEYISNKLTAITGTTWNYKYITSINMNPCYYGNAIISSCSLTTALRVYLSKV--- 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            + + NR  + + V+      +V   HL                      QAQ +KD + 
Sbjct: 114 -NSSENRSFLLVRVDFGSSYFYVGTAHLGLNGD--------------QVIQAQKIKDELN 158

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               S    +I  D N   N    N          D            C  N N      
Sbjct: 159 NNGFSNERLIIGCDLNDGENSDTYNIMLNNVFSMVD--SGPAGICTLECYNNSNNPK--- 213

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ID+      +      +                  +SDH P+    +
Sbjct: 214 IDFLFNCGTSIDATKSKVLQVD-------------ISDHRPVMAYIN 247


>gi|254574412|ref|XP_002494315.1| Mitochondrial membrane localized inositol phosphosphingolipid
           phospholipase C [Pichia pastoris GS115]
 gi|238034114|emb|CAY72136.1| Mitochondrial membrane localized inositol phosphosphingolipid
           phospholipase C [Pichia pastoris GS115]
          Length = 413

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 84/310 (27%), Gaps = 50/310 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++L+++N   L       + K+  +R  +    L       D DIV LQE+        
Sbjct: 2   SLKLLTFNTWGL-----KYVSKHRQERLRAIADELADD-TKHDYDIVALQEVWCDEDWEY 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  K                           +  R          +P+ G+  +F R   
Sbjct: 56  LTTKCNKKY-----PHSRRFYAGIIAGPGLCVLSRIPIESTFLYRFPINGSPSAFFRGDW 110

Query: 143 RR------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                        +   G+ I +L+ H+ +   L+      +      + QA        
Sbjct: 111 YVGKSVGVIKLAPLREGGRPIALLNSHMHAPYALNG----SASYLCHRTCQAWDFAHLAE 166

Query: 197 QKKESLVPFVIAGDFNRKINYLGNN------------DDFWKTIDPNDSLIRFPKEKDSR 244
             + S    V+ GD N +   +               +    TID        P+E+   
Sbjct: 167 ALRSSGYAVVVVGDLNSRPGSIPYRIFQQIGQLSDSWELVHGTIDSKVVAQLSPEEQVIT 226

Query: 245 CNANKN-----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                +            ++   +D+ ++       +   S   +              S
Sbjct: 227 AGTTCDSLLNTWRLKCAPQSAARLDFALVS---ADRIKPTSAKVVFT---TPIPNVGSYS 280

Query: 294 DHCPISIDYD 303
           DH   +   +
Sbjct: 281 DHFAYATTLE 290


>gi|229131369|ref|ZP_04260269.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
 gi|228652113|gb|EEL08050.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
          Length = 263

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 71/269 (26%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102
                L +  +  D D++ LQE+        V        F         +         
Sbjct: 18  EKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNII 77

Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  N K I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWK-TRKIVSATIAYNDKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  +            S
Sbjct: 183 EGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLIL---------SNRS 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +          +    +SDH  + +  D
Sbjct: 234 KTVNSSKVIFNGTNRNVISDHFGVEVQLD 262


>gi|260820272|ref|XP_002605459.1| hypothetical protein BRAFLDRAFT_212438 [Branchiostoma floridae]
 gi|229290792|gb|EEN61469.1| hypothetical protein BRAFLDRAFT_212438 [Branchiostoma floridae]
          Length = 566

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/315 (11%), Positives = 84/315 (26%), Gaps = 36/315 (11%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            R+VS+NI         LS                    LL +     +AD++ LQE G 
Sbjct: 251 FRVVSYNILADVYAKTELSLTVLYPYCPPYALELDYRRQLLLKELVGYNADLLVLQETGK 310

Query: 77  ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +A+      +     Y  +   +  +    +        ++        +      
Sbjct: 311 SLFNDALVPALDLSGMDGVYIGKGQQSEGEAIFYHRDKFRFLSQEDINVGECLT-SDPSC 369

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDI-----HLKSFCFLDSLENTYSPSCSLLSQQA 188
            D      +  AV   V      + V+ +       +  C  ++    +  +  +   Q 
Sbjct: 370 HDLQKWLSHSPAVLNKVTSRSTVLQVVLLESIEDPSRRLCVANTHLYWHPRAPHVRLVQM 429

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--- 245
                ++ +  +S V  ++ GD N             + +  + +     + + +     
Sbjct: 430 AVCLKFLEK-IDSSVSLLLCGDLNSHPTSGLYELLTKQAVPASHTDWFPAEPQTTDEGVD 488

Query: 246 ---------------NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRG 289
                            N     +  +DY ++              +      +      
Sbjct: 489 LSHPFTLTSACGLPDYTNYVGGFQGTLDYIMIDTCQLAVNQTIPMPTHEEVTANTALPSI 548

Query: 290 KRLSDHCPISIDYDF 304
              SDH  I  D ++
Sbjct: 549 VFPSDHIAIIADVEW 563


>gi|116330262|ref|YP_799980.1| sphingomyelinase B [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116123951|gb|ABJ75222.1| Sphingomyelinase B [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 741

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 93/300 (31%), Gaps = 26/300 (8%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + S   +++++S N++ +S    +  W +  ++  ++      Y K+   DI+  + +  
Sbjct: 259 SNSQNLEIKILSHNVSLMST--QLPAWADWGQKERAEQIANSDYIKHQ--DIIVFEGLSD 314

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSY 128
            NA   +         Y TE + +     +               + +  +     +  Y
Sbjct: 315 ANARKILLDGIRSQYPYQTEAVGSTRNGWNATLGVYRQSTSADGGVVIVSQWPIEEKVQY 374

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                      + ++    + +  NGKK  V+   ++      S          +   Q 
Sbjct: 375 IFDNPGCGVESSYHKGFNYVRINKNGKKFHVIGTQVQMVGPACSDLGRS-----VRMNQF 429

Query: 189 QWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +KD+I  K        +IAGD N                         P  +D + NA
Sbjct: 430 NNIKDFIDTKAIPRDELVLIAGDLNVTRGSDEYYGMLTSLNVSEPKYAGIPYTQDPQVNA 489

Query: 248 ----NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCPIS 299
                         +Y ++ ++  +  + ++ +    +    K          SD  P+ 
Sbjct: 490 LTALRHRDSQPTYTNYVLVSKSHSQPEVWQNLAYDPISPKIWKRSNGHISYEFSDSYPVY 549


>gi|329847403|ref|ZP_08262431.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
 gi|328842466|gb|EGF92035.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
          Length = 265

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 77/306 (25%), Gaps = 70/306 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +   +WN+N                        ++ +    + DI+ LQE+         
Sbjct: 3   LSFATWNVN----------------SVRLRMPQIQAFLAQTEIDILCLQEIKCQE----- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   + +   L       +       +A+  K         P       F R G  
Sbjct: 42  ----HEFPYDAFRALGFEHIHVAGQKGWHGVAIVSKVPFESGDLLP-------FCRRGEA 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           RA  + V+     + + + ++ +   +            L     + L   + Q+     
Sbjct: 91  RAQAIRVDN----VDIWNFYIPAGGDVPDRTTNDKFDHKLEFY--ERLCTHLAQR-NRDH 143

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P +I GD N                   +     + F   +   D    F          
Sbjct: 144 PLLICGDLNIAPGEFDVWSHRQMLRVVSHTPLEIEAFGNFMACGDFHDPFRVAYPEPQKI 203

Query: 248 NKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+ +++      +       +     D      + SDH P
Sbjct: 204 FTWWSYRASDYRASNRGLRLDHVLLNPALMARVAN-----LTAKIHDDVRGWTQPSDHVP 258

Query: 298 ISIDYD 303
             + ++
Sbjct: 259 AQVTFE 264


>gi|257452011|ref|ZP_05617310.1| Endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R]
          Length = 265

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 90/297 (30%), Gaps = 54/297 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++L++ N++  L             ++      LL +       D++ +QE+        
Sbjct: 1   MKLLTINVHSWL------------EEKQEEKMELLAKVIAEKRYDVIAMQEVNQKIEARL 48

Query: 83  VFPKNTWCIFYS------------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +  +     F                           +     IA+  ++  + ++ +  
Sbjct: 49  LKGEIREDNFLYQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYC 108

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             +K  +S + +R+ V++ +EI GK+I     H+     ++        +          
Sbjct: 109 TNSKTVYSIS-SRKIVKIFLEIEGKEIEFYSCHMNLPNCIEENMEQNIQN---------- 157

Query: 191 LKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
               I +        ++ GDFN     +         + +  + +L +   +  +     
Sbjct: 158 ----ILKHSSRNCLKILMGDFNTDAFHDQSSYQKILEQGLFDSYTLSKKKDDGVTVYKNI 213

Query: 249 KNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N +    +DY  + +          F+   Y           +SDH  + +  
Sbjct: 214 SGWENSVEEKRLDYIFLTEQYEVESSYVIFNGKNYPC---------ISDHNGLEVIL 261


>gi|91206582|sp|Q2QDF1|DNSL1_CERAE RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X;
           AltName: Full=Deoxyribonuclease I-like 1; Short=DNase
           I-like 1; Flags: Precursor
 gi|73921488|gb|AAZ94274.1| DNase X [Chlorocebus aethiops]
          Length = 302

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILVN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F ++      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLRELNRFDASGPYSTLSSPQLGRTTYVETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181
                     +       R        +       + ++ +H         L   Y    
Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSDVLPSLVLVPLHTTPKAVEKELNALYDVFL 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +                      ++ GDFN     L         +           + 
Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +              I   +  +     L   +  +        +     +SDH P+ ++
Sbjct: 214 EDTTVRASTHCAYDRI--VLHGERCRSLLHTAAAFDFPTTFQLTEEEALNISDHYPVEVE 271

Query: 302 Y 302
            
Sbjct: 272 L 272


>gi|296161384|ref|ZP_06844191.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
 gi|295888370|gb|EFG68181.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
          Length = 259

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +     AD++ +QE+         
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWFGEQKADVLCVQEIKCSQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      + +         A    +     +      +G          R
Sbjct: 43  ---DMTPEFMAPHNFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE+   K+ V+ +++ S    D  +                L            
Sbjct: 95  Y-----VELRFGKLSVISVYVPSGSSGDERQQAKYRFMDEFMPHLAELAQ--------ER 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R    
Sbjct: 142 EVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +   +      +               R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPDIASKAKRTDV-----------FRDIKFSDHAPLT 250

Query: 300 IDYD 303
           +DYD
Sbjct: 251 VDYD 254


>gi|319404920|emb|CBI78520.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 277

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 78/283 (27%), Gaps = 51/283 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + + S+NI+     + +                + +    L ADI+ LQE       
Sbjct: 30  SYDLTVASYNIHKCVGVDKIFNPV-----------RIVRVITELQADILALQEADRRFGK 78

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        +    +       N       A+  +  R+   S   L         
Sbjct: 79  RTGLIDLQLLKAETGLIPVPLKTMSPNGHGWHGNALFLRQGRIHNISQITLPG------F 132

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+ + +++    I V+  H   F                 ++Q + L   + +   
Sbjct: 133 EPRGAIIVELKMKSGFIRVIAAHFGLFRHS-------------RNKQVKMLLALLKKY-- 177

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           S++P ++ GD N         +         +    +         +  +    + +D  
Sbjct: 178 SVMPTLLVGDLN---------EWRKGKSSSLNFFFPYFDITFGSVPSFPSPFPFLALDRI 228

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +            I+  E+      +  SDH PI    +
Sbjct: 229 FAFPH----------QLIINVENHYSPLARIASDHLPIKAYLN 261


>gi|282855380|ref|ZP_06264703.1| exodeoxyribonuclease III [Pyramidobacter piscolens W5455]
 gi|282586760|gb|EFB92005.1| exodeoxyribonuclease III [Pyramidobacter piscolens W5455]
          Length = 307

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 72/304 (23%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N+L                 S   +L ++      DI+ LQE    +     
Sbjct: 52  MRVATFNVNSL----------------RSRLPILERWLPGAGVDILALQETKVQD----- 90

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +    + +         +  +A+  K          + G  D  S   + 
Sbjct: 91  -----QEFPLADMEQLGYRAAFRGEKSYNGVAILSKREPDEV----IHGFSDGVSPLWDT 141

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           R +          IW+LD ++     +   +          +                  
Sbjct: 142 RLIAARF----GDIWILDTYVPQGKEITHPDYEAKKEFLRRTAALIA--------ARKDE 189

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GD N     L                   D +  +     +    +         
Sbjct: 190 KLLWTGDLNVAPTELDVTNPANKKDHVCFVKELRDLFAELCAPLVVDLL-RVHHPGEELY 248

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            ID+ +                     D      ++ SDH P+
Sbjct: 249 SFFDYRIKNALERRIGWRIDHMLATPALAGQSRACWI-------DTEPRGWEKPSDHTPM 301

Query: 299 SIDY 302
             D+
Sbjct: 302 LADF 305


>gi|227494748|ref|ZP_03925064.1| possible exodeoxyribonuclease III [Actinomyces coleocanis DSM
           15436]
 gi|226831748|gb|EEH64131.1| possible exodeoxyribonuclease III [Actinomyces coleocanis DSM
           15436]
          Length = 273

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/272 (11%), Positives = 70/272 (25%), Gaps = 50/272 (18%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +         D++ LQE+ + + +        W +   +  +   +           +  
Sbjct: 21  MASVLAETAPDVLALQEVRANDKILADLMGEDWEMVNYSCEIKGRAGVAV-------LVR 73

Query: 117 RKKNVRV--LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           R  +V +      +      D       R  +E+ V    + + V+  +L S        
Sbjct: 74  RSSHVELLADSARFGAPEGGDKVPVDTGRW-LEVDVVDGDRTVTVISAYLHSGELGTEKM 132

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226
           +             + + + + +   S    V+ GD N   +     +            
Sbjct: 133 DQK-------YAHLKLVTERMAEIVASGKHAVVVGDLNIVRSEKDIKNWKGNHNKSAGVM 185

Query: 227 ---------TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYK 268
                     +    + I        +         +           IDY         
Sbjct: 186 DEEIAYVDGWMSSGWTDISRQLHGAEQQGPYTWWSWRGKSFDNDAGWRIDY-------QL 238

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              + + +      D   +  KR SDH P+ +
Sbjct: 239 ATAELAATATSCVVDRADAYEKRFSDHAPLRV 270


>gi|223982777|ref|ZP_03633005.1| hypothetical protein HOLDEFILI_00279 [Holdemania filiformis DSM
           12042]
 gi|223965277|gb|EEF69561.1| hypothetical protein HOLDEFILI_00279 [Holdemania filiformis DSM
           12042]
          Length = 656

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 88/313 (28%), Gaps = 63/313 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQ-----------KVRLVSWNINTLSEQEGVSLWKNSVKRT 50
           I K+ L L+  ++P T   A             +R+ +WNI                 + 
Sbjct: 4   IMKFTLGLLLLMLPVTGCSASPQTSAGSSGPVTLRVGTWNI---------------AAKN 48

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
             D   + +       D V +Q++   N    V                + +K     + 
Sbjct: 49  HPDTQAMAELFAQHHLDAVGIQKVDVLNDRNPV--DMVQSFVNEDYPYAHFAKGRDFANG 106

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              + +  +   +   S PL       ++   R    +++E +G +I + + HL      
Sbjct: 107 AFGVGILSRYEPLAVSSIPLESTGSRATKTLER----VVIEKDGVQIALYNTHLSW---- 158

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                    +  L  +Q   + + +    + +   +I  DFN   +    +         
Sbjct: 159 --------ENLDLRRRQIAQVIERVN--ADPVEYKIITADFNTDQHAYEYSMFRDNFNLA 208

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           N              N       +   D      +     I            DI+    
Sbjct: 209 NGY------------NGMWYDTYREGDD-----PSMQVLTIDNVLCTKNMRITDIQRVES 251

Query: 291 RLSDHCPISIDYD 303
            LSDH     +++
Sbjct: 252 ELSDHDLFYAEFE 264


>gi|53802367|ref|YP_112853.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath]
 gi|53756128|gb|AAU90419.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath]
          Length = 257

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 87/307 (28%), Gaps = 80/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +R+++ N+N +        +                +    +ADIV LQE+   +     
Sbjct: 1   MRIITLNVNGIRSAARKGFF---------------DWLPKQNADIVCLQEIKAQTTQLND 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F   ++  +Y       +          + +A+  +               D+ +R  
Sbjct: 46  ELFWPESYACYYLEAEKKGY----------SGVALYARKEPDDVIQGLGWDDMDTEARY- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +E    ++ V+ +++ S    +  +       ++          ++     S
Sbjct: 95  --------LEARFGELSVVSLYIPSGSSSEQRQ-------AVKFGFLDRFLPFLDDCARS 139

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              ++  GD+N                             +  +    +  F        
Sbjct: 140 GRQYIFCGDWNIAHKPIDLKNWRSNQKNSGFLPEERAWLDRVFEEAGWVDAFRAVNPEPE 199

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  N+           IDY V+     + +   +             + +R SDH 
Sbjct: 200 -QYTWWSNRGQAWAKNVGWRIDYQVVSPGLRELIRSAAI-----------YKEERFSDHA 247

Query: 297 PISIDYD 303
           P+ IDYD
Sbjct: 248 PLIIDYD 254


>gi|228924088|ref|ZP_04087364.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228835578|gb|EEM80943.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 334

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 88/311 (28%), Gaps = 60/311 (19%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           T    + +    + +D DI+ +QE  S      +F +N    + S      +     ++ 
Sbjct: 28  THETVSRVADTIREIDPDILAIQEAPSRPEEMALFIQN----YLSNNGESIYKFILGDSG 83

Query: 110 IHTAIAVRKK-----------NVRVLQQSYPLLGAKDSF----SRAGNRRAVELLVEING 154
               +A+  K           +  +     P L   D      S    R  + +  +I G
Sbjct: 84  QQQKLAILYKPNAVDSLMLAPHPEIKNLIDPWLADIDGDELLESYEFTRSPLVINTQIGG 143

Query: 155 KKIWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             + ++ +H KS                 +  +    +    S +A  ++ ++     + 
Sbjct: 144 HHLQLIVLHTKSNFVNLGKEMWENLATRQNYVHEALRNRRRNSAEAMRVRQYVDSMLHAD 203

Query: 203 --VPFVIAGDFNRKINYLGNNDDFWKTIDPN-----------DSLIRFPKEKDSRCNANK 249
                ++ GD N          ++      +                   E         
Sbjct: 204 LTKNIIVLGDLNDGPGMDYFERNYLTHNTVDVIVGSTFEPEFIFHHAQHDENPQDRYTAV 263

Query: 250 NLRNK-------IPIDYFVMDQNAYK----FLIQESFSEI-----LYNEDDIKSRGKRLS 293
                       + +D+ ++            +Q S          +  ++   R  R S
Sbjct: 264 FDDFVTGEANSHLLLDHILLSPGLSTNSGLRRVQNSGKIHHAEYNNHTVNNGNFRENRPS 323

Query: 294 DHCPISIDYDF 304
           DH P+SI  ++
Sbjct: 324 DHRPVSILLEY 334


>gi|162457539|ref|YP_001619906.1| hypothetical protein sce9253 [Sorangium cellulosum 'So ce 56']
 gi|161168121|emb|CAN99426.1| hypothetical protein sce9253 [Sorangium cellulosum 'So ce 56']
          Length = 231

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 61/247 (24%), Gaps = 26/247 (10%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L +   +L   ++ LQE+ +  A   +    + +                 S      A+
Sbjct: 2   LARLIGDLRPCLLGLQEVHAPAASGDLGQAGELSRLAGGYRAWFAPGRVAASGECEGVAL 61

Query: 115 AVRKKNVRVLQQSYPL-LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             R+    +      L L   D F R   R  +   +   G  + VL  HL       + 
Sbjct: 62  LCREDIEVLDHSVEALTLDRDDPFERDSQRVVLRAAIRHAGAVVDVLVTHLSLSKRARAR 121

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 S +   +Q           K      V+ GDFN   +            + +  
Sbjct: 122 TVRELVSFAARERQ-----------KSGSHGAVLMGDFNALPSEEAVCYLQASAGNGSWL 170

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                                  IDY  +                 +     +      S
Sbjct: 171 DAWTQAHPGKAGGTWPAGLPLRRIDYVFVQPG------------EGWAITRCERAPFSGS 218

Query: 294 DHCPISI 300
           DH  ++ 
Sbjct: 219 DHLGVAA 225


>gi|331266731|ref|YP_004326361.1| metal-dependent hydrolase superfamily protein [Streptococcus oralis
           Uo5]
 gi|326683403|emb|CBZ01021.1| metal-dependent hydrolase superfamily protein [Streptococcus oralis
           Uo5]
          Length = 271

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 74/281 (26%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +   + D D++  QE+       +V   N +    S                
Sbjct: 17  EEKFQILLRDILDKDYDLICFQEINQEMTSPEVEVNNHYQALPSAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ GK++ +  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETEVEGKELALASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLILA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     +   S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                          ++SDH  ++    +
Sbjct: 239 KEL---------EVESLQVVFDGQNSPQVSDHYGLNAVLTW 270


>gi|320592520|gb|EFX04950.1| DNA lyase [Grosmannia clavigera kw1407]
          Length = 795

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/343 (11%), Positives = 77/343 (22%), Gaps = 85/343 (24%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVAKVF 84
           V+WN+N +      + W N           L+     LDADIV  QE+ +   +    + 
Sbjct: 12  VTWNVNGIRNPFKYAPWNNDKT--------LQAMFDRLDADIVCFQEVKTPKPSLTDDLV 63

Query: 85  PKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRK--------KNVRVLQQSYPLLGAKD 135
               W  FYS       +S           +  R         +      +       + 
Sbjct: 64  FIPGWDSFYSFPHSQTGYSGVSVYTRDSCCVPTRVEEGVTGVLRAPGTTTRYIDRPADRQ 123

Query: 136 SFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSL--LSQQAQWL 191
                  R+     V  +    +   L +    F  ++                     L
Sbjct: 124 IGGYPTERQLQSAAVARDLIDAEGRCLVLDFPLFVLINVYCPARRNDDRTDFRDAFLLAL 183

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLG---------------------------NNDDF 224
              +     +    V+ GD N   ++L                            +   F
Sbjct: 184 DARVRNLVAAGRHVVLCGDMNTMRHHLDTAAVWGHHGQVLPAEALAFDEDYLSLRSAAIF 243

Query: 225 WKTIDPNDSLIRFPKEKDSRCNA----------------NKNLR---------NKIPIDY 259
            + +   D +     +                                         ID+
Sbjct: 244 GRLLFDGDRITNTTTDIPPSSPPILHDACRELHPQRRGMYTCWDTRKNHRPANFGSRIDF 303

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +      + L+                     SDHCP+ +  
Sbjct: 304 VLCSPRLMQLLV----------IQADIQPQLLGSDHCPVYVVL 336


>gi|294788545|ref|ZP_06753787.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453]
 gi|294483422|gb|EFG31107.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453]
          Length = 259

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 76/307 (24%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           +R++S N+N +                         Y     ADIV +QE+ +  +    
Sbjct: 1   MRIISANVNGIRSAYKKGF---------------LAYIAQSGADIVCVQELKAQESDLSD 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +     +   +   +S     +                   +  +G         
Sbjct: 46  DMQRPHGMHGVWHCAQKRGYSGVAIYSKQKP--------------DHVQIGLGIEKFDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V  +   + V+ ++L S    +  +                LK        S
Sbjct: 92  GRF-----VRADFGHLSVISLYLPSGTSAEERQAYKYEFLDAFYPLLAELKA-------S 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCN 246
               V+ GD+N     +   +      +                    +   +       
Sbjct: 140 GRDVVVCGDWNIAHQNIDIKNWKGNLKNSGFLPEEREWIGHVITKLGWVDIWRTLYPDVA 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++  N                      +  + SDH P
Sbjct: 200 GYTWWSNRGQAYANDVGWRIDYQMVTPNLATKAHTAHV-----------YKEVKFSDHAP 248

Query: 298 ISIDYDF 304
           + +DYD+
Sbjct: 249 LVVDYDY 255


>gi|308234996|ref|ZP_07665733.1| putative exodeoxyribonuclease III [Gardnerella vaginalis ATCC
           14018]
          Length = 287

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/279 (11%), Positives = 70/279 (25%), Gaps = 44/279 (15%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-------ND 109
           +  + ++   D+  +QE+ +              ++ S       + R  +         
Sbjct: 20  MLDWVQDHTPDVWCMQEVRAPQDAIDPIMSKIKDLYTSKSGESGQNDRRFSVTNQICEIK 79

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +A+      V Q+      ++D  S    R     +    G  I V  +++ +   
Sbjct: 80  GRAGVALVTTLPVVEQRYGLPGLSEDVDS---GRWVETDVHTPQGYDITVASVYVHAGNV 136

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------- 216
            D            L    + L +            ++ GDFN                 
Sbjct: 137 DD--PQKMQQKFRFLDTMLKRLGELRDIAASGGNQAILCGDFNIAHTPLDIKNAKANEKS 194

Query: 217 ---YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQ 264
                       + I+  + +                   +           +DY     
Sbjct: 195 AGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAFDNNVGWRLDYQFATP 254

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +           +  D  +S   R SDH  ++I Y+
Sbjct: 255 EIAETACG-------FVIDRAQSYDSRWSDHAALNIKYN 286


>gi|333029608|ref|ZP_08457669.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
 gi|332740205|gb|EGJ70687.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
          Length = 363

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 98/307 (31%), Gaps = 68/307 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              + ++++S+N+ + +  +  +  KN           + +Y K  +ADI+ +QE     
Sbjct: 95  PPQEAIKIISYNVMSFNGFKKEADGKN----------NILEYLKKSNADIICMQEYNVSK 144

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              +V  ++              +  D  +    AI  +     +++  Y          
Sbjct: 145 NKKQVTQQDVEKALSRYPYHNIQAVGDRGSGNKLAIYSKYPISNIVKIDY---------- 194

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP------------------- 179
           ++    ++   V I+G K  +++ H +S       +  Y                     
Sbjct: 195 KSAYNGSIAYTVNIDGNKTLIINNHFESNKITMEDKVVYERILKMEDKTQIVKDTKGLVS 254

Query: 180 ----SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               + S+  +QA+ + + +      L   ++ GDFN       N       +       
Sbjct: 255 KIVEASSIRQKQAKKVDNVVK--ISKLPFIIVCGDFNDSPLCYTNR------LLEETLDN 306

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF--LIQESFSEILYNEDDIKSRGKRLS 293
            F K       +    +    ID  ++ +N   +  ++ +S  +               S
Sbjct: 307 AFVKSGKGLGISYNQNKFYFRIDNILISRNLKAYNCMVDKSIKD---------------S 351

Query: 294 DHCPISI 300
           DH PI  
Sbjct: 352 DHYPIWC 358


>gi|281420679|ref|ZP_06251678.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           copri DSM 18205]
 gi|281405452|gb|EFB36132.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           copri DSM 18205]
          Length = 356

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/323 (9%), Positives = 74/323 (22%), Gaps = 59/323 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKN---------SVKRTTSDYTLLRQYAKNLDADI-------- 68
           +  +N   L +    +   +         +  + T+    + +   ++  D+        
Sbjct: 38  VGFYNQENLFDTCHDAGKNDYEYLPAKGWNGMKYTNKLKNMSRALADMGTDVLPNVGCAF 97

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS- 127
           + L E+ + N +  +  +       +      H +      I  A+        V     
Sbjct: 98  IGLSEVENANVLKDLTAQPPLK---ARNMQFCHIEGPDKRGIDCALLYNPALFTVKNTRL 154

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            P +      S    R    +  E+ G+ + V+  H  S         + +    ++   
Sbjct: 155 VPYVQELAKDSAYKTRGFFTVRGELAGEDVAVIVCHWPSRFSGPFYRESGARQTKVVKDS 214

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLIRFPKEK 241
              L   +           + GD N        +       +       +     +    
Sbjct: 215 LLRLNPAMK--------VFVMGDMNDDPTDASMHKVLKAKAEISEVGADDMYNPWYNILA 266

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKF------------------------LIQESFSE 277
                      +    D  V+  N                              +  +  
Sbjct: 267 KEGKGTLFYSGSWNLFDQIVITPNLLNRDSKNKDYSSLKFWKNHIFRRDYLIQQEGQYKG 326

Query: 278 ILYNEDDIKSRGKRLSDHCPISI 300
                          SDH P+ +
Sbjct: 327 APLRTKAGGRWLNGYSDHLPVVM 349


>gi|322387486|ref|ZP_08061096.1| RgfB protein [Streptococcus infantis ATCC 700779]
 gi|321142015|gb|EFX37510.1| RgfB protein [Streptococcus infantis ATCC 700779]
          Length = 272

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 74/281 (26%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
              + LL Q       D++  QE+       +V     +    S                
Sbjct: 17  EEKFQLLLQDILENSYDLICFQEINQEITSTQVESGPLYNPLPSAEPIHQDHYVRLLVEK 76

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +++  K     ++   L+   D  +    RR   +
Sbjct: 77  LSEKGLDYYWTWAYNHIGYDRYHEGVSILSKTPIKARE--ILVSDVDDPTDYHTRRVALV 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              + GK++ V  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETVVEGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +D  D+     +   S     +    K       IDY  M 
Sbjct: 179 GDFNNPAGQEGYQAILSSPLDLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFMT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ++                         ++SDH  +  +  +
Sbjct: 239 KDL---------QVEKLQVVFDGQASPQVSDHFGLQAELSW 270


>gi|303391389|ref|XP_003073924.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Encephalitozoon intestinalis ATCC 50506]
 gi|303303073|gb|ADM12564.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Encephalitozoon intestinalis ATCC 50506]
          Length = 492

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 78/310 (25%), Gaps = 45/310 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + ++NI +       +   + V         + Q     + DI+ LQE+  Y+  
Sbjct: 169 GDTISVGTFNILSNVWAARSTYAPSWVINPEFRREGILQEIVLYNVDILCLQEIELYSFF 228

Query: 81  AKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKN---------------VRVL 124
                +      + S        K  ++       A+  +                    
Sbjct: 229 DFYKEQLEMRCNYDSIIYPRGRIKNVADKKNVDGCAIFWRRSKFRLIAQFPIDFCQKITQ 288

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              + +           +  A+  L+E  NG+++ V++ H+                  +
Sbjct: 289 DTRFNINQELLDRYGKKDNIAIGALLERPNGQQVLVVNTHIFWDP----------DYSDV 338

Query: 184 LSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
              Q   L + + +          ++ GDFN   +         +TID  D         
Sbjct: 339 KLLQVILLIEEVRKISSRHPNACLLLQGDFNSLKSSSVYKSITTQTIDLADFRGTMHHLS 398

Query: 242 DSRC----------------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                                 N     K  IDY   D       +     +        
Sbjct: 399 SQEFGEGLKLNDSYRNQDLGFTNFTPLFKDVIDYIFYDSKVTLTSVLAPVEDEYAENIAG 458

Query: 286 KSRGKRLSDH 295
                  SDH
Sbjct: 459 LPNMHFPSDH 468


>gi|307706951|ref|ZP_07643750.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK321]
 gi|307617665|gb|EFN96833.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK321]
          Length = 271

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 80/281 (28%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
              + LL +   + D D++  QE+       +V   + +    +                
Sbjct: 17  EEKFQLLLEDILDKDYDLICFQEINQEITSPEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKDYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVAVA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++G ++SDH  ++   ++
Sbjct: 239 KEL---------EVENLHVVFDGNKGPQVSDHYGLNAILNW 270


>gi|68075767|ref|XP_679803.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56500627|emb|CAH99781.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 958

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/399 (11%), Positives = 95/399 (23%), Gaps = 105/399 (26%)

Query: 11  FFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           F  +  + +   +  +++WNI        E  +     +   +   T + Q   N   DI
Sbjct: 557 FKTLNSSNTSDNQFTVMTWNILAEIYGTSEAFAHCDPYMLSWSYRKTKIIQEILNYRPDI 616

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI------NHSKRDSNNDIHTAIAVRKKNVR 122
           + LQE+ + + +    P  +   +    +        +  K           A+     +
Sbjct: 617 ICLQEIQNEHFLEFFKPCLSQYEYQGVYKQKTKEIFTSPGKHKGGKYTIDGCAIFFNKKK 676

Query: 123 VLQQSYPLLGAKD---------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
                   L                      A+   +  +   + +L  H+++    DS 
Sbjct: 677 FKFVEIYALEFSKLIKEGSVISLPKEVQKNPALSKGLLKDNIALVLLLEHVENNKIYDSE 736

Query: 174 ENTYSPSCS--------------------------LLSQQAQWLKDWIT-------QKKE 200
           +   + +                            +   Q Q L   I        QK E
Sbjct: 737 KWEKNNNPRFENRKNKKKVVIVANTHIIANPEATYVKIWQTQILVKVIEYLKINFIQKYE 796

Query: 201 SLVPFVIAGDFNRKINYLGN------------------------NDDFWKTIDPNDSL-- 234
            +   +I GDFN   N                                   ++   +   
Sbjct: 797 IIPSIIICGDFNSTPNSAVYQLLYKKKCFPTHHDINSDEHGLLEYLPMSHNLNLKSAYAI 856

Query: 235 --------------------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                                    +K      N        +DY   +      +   +
Sbjct: 857 SNFLSQTINTEESINNIIINNTIDLDKFEPPFTNYTSNFIGCLDYIFYNDEDLNIISTVN 916

Query: 275 FSEILYNEDDIKSRGK---------RLSDHCPISIDYDF 304
             +      + +             R SDH P+   ++F
Sbjct: 917 IPDENQLIQESQIYHLSSSALPSPIRSSDHFPLIAKFEF 955


>gi|115953191|ref|XP_784408.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115958815|ref|XP_001178780.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 1354

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/329 (10%), Positives = 89/329 (27%), Gaps = 43/329 (13%)

Query: 19   SVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            +    +R+ S+NI          S                    LL +     +ADI+ L
Sbjct: 1023 TSPDCLRIFSYNILADMYADSDFSRDYLYPYCSPVALDIDYREQLLLKEISGYNADILCL 1082

Query: 72   QEMGSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            QE G       + P  T   +        R     +     +    +  +          
Sbjct: 1083 QECGKKLYEYSLKPALTDQGYKGLLICKTRQTPEGEALFYREDRFRLLEQYDISLAEAFQ 1142

Query: 128  YPLLGAKDSFSRAGNRRAVELLV------------EINGKKIWVLDIHLKSFCFLDSLEN 175
                 +    + + +   +  ++            + +  +  +   +   +    +   
Sbjct: 1143 KESSNSDLIEAVSKSPAMLNQVLTRSSVLQVAVLEDCHDPRRRICVANTHLYFHPRAGHI 1202

Query: 176  TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                + ++L    +  +  + +  +  +  ++ GD N   +  G  +   K   P +++ 
Sbjct: 1203 RLIQTITILRHLQKIQQQHLEKNPDIKLAMILCGDLNSAPSCPGVYELLSKKHIPENNVQ 1262

Query: 236  RFPKEKDSRC-------------------NANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
             +   K+  C                     N        +DY ++D N  + + +    
Sbjct: 1263 WYCGGKEEFCGGMTLSHSVDFTNACTSQEYTNFVAGFVASLDYVLIDSNHLEVIREIPMP 1322

Query: 277  EILYNE-DDIKSRGKRLSDHCPISIDYDF 304
            +                SDH  I  D  +
Sbjct: 1323 DHDDVIAHVALPNEVFPSDHLAIGCDVRW 1351


>gi|319442381|ref|ZP_07991537.1| exodeoxyribonuclease III [Corynebacterium variabile DSM 44702]
          Length = 259

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 76/297 (25%), Gaps = 65/297 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   +    +R +    D D++ LQE    +A    
Sbjct: 1   MRVATWNIN----------------SVRTREARVRDFLSRSDVDVLCLQETKCTDA---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       + +          +AV  +       +       D    A   
Sbjct: 41  --------QFPDFSDTGYEQAHHGLGSFNGVAVLSRVGIDEVTTDFGQPGFDKDPAAPQE 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           +     + +    + V  +++ +   +     TY            +L    +  ++   
Sbjct: 93  QEARA-LGVTCGGVRVWSLYVPNGREISDRHYTYK---------LDFLDALASYAEQEHR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFW-----------KTIDPNDSLIRFPKEKDSRCNANKNLR 252
           P V+ GDFN         D  +           +    +       +   +         
Sbjct: 143 PTVVTGDFNITPTDDDVWDPSFFVGKTHVTPRERDALRHLEDAGLTEATATLHGRYSYWD 202

Query: 253 NKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +           ID                  +     D  + RGK  SDH P+ +
Sbjct: 203 YQAMRFQRGQGIRIDLQYCRG-------ITPADDPEPWVDVDERRGKGASDHAPVIV 252


>gi|224532103|ref|ZP_03672735.1| exodeoxyribonuclease III [Borrelia valaisiana VS116]
 gi|224511568|gb|EEF81974.1| exodeoxyribonuclease III [Borrelia valaisiana VS116]
          Length = 255

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 80/303 (26%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ K    DI+ +QE  +    + K
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVKEYAPDILCVQETKALREQLPK 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +            
Sbjct: 46  DLILENYYSYFSKSKIKGYSGVCIYSK---------------VEPIAVNFLGKEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +            +++ +  +                       ++++ I       
Sbjct: 91  RGIIA-----YYDDFVLINGYFPN-------SQALRRRLVYKLDFLSYIENLIDSLVNGG 138

Query: 203 VPFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              VI GDFN     +                 +  W     N   +   +  +      
Sbjct: 139 KNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETTWIDNFLNKGYVDTFRIFNKEPGYY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYFV+++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWNYRTGAREKNMGWRIDYFVVNEFFKRNVKKSLILDKV-----------MGSDHCPVF 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEL 250


>gi|86135128|ref|ZP_01053710.1| exodeoxyribonuclease III (Xth) [Polaribacter sp. MED152]
 gi|85821991|gb|EAQ43138.1| exodeoxyribonuclease III (Xth) [Polaribacter sp. MED152]
          Length = 253

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 91/302 (30%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                         + K  + D++ +QE  ++     +
Sbjct: 1   MKIISYNVNGIRAALKKGF---------------SDWLKAANPDVICIQETKAHKEQLDL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       H    +    ++++A+  K     + ++   G          R
Sbjct: 46  -------SLFEDAGYPYHYWFSAQKKGYSSVAILCK----EKPNHIEYGTGIESMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + ++   + ++ ++L S           +             +++IT  ++ + 
Sbjct: 95  N-----LRVDFDDVSIMSLYLPSGT--------NALRLDYKFNYMDEFQEYITNLRKEIP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP-------------NDSLIRFPKEKDSRCNANKN 250
             VI GD+N     +  ++   K +               N   I   +  +        
Sbjct: 142 NLVICGDYNICHEEIDIHNPKMKGVSGFLPEERTWIGNFINSGFIDSFRYLNKELQQYSW 201

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           +DY ++ +     + +                  + SDHCPI+++
Sbjct: 202 WSYRANARANNKGWRLDYAMVSEPLKDKISRA-----------YILPEAKHSDHCPIALE 250

Query: 302 YD 303
            D
Sbjct: 251 LD 252


>gi|239832679|ref|ZP_04681008.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG
           3301]
 gi|239824946|gb|EEQ96514.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG
           3301]
          Length = 285

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/278 (10%), Positives = 64/278 (23%), Gaps = 51/278 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + S+N++     +                    +    +DAD++ LQE            
Sbjct: 38  IASYNVHKCIGIDKQFNP-----------QRTAEVISEIDADVIALQEADRRFGERSGLL 86

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                        +  +             +  +   V       L           R A
Sbjct: 87  DLGLLERRHGLVPVPITATMPKGHGWHGNVLLFREGVVRNVQQLKLPG------VEPRGA 140

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   ++     + V+  HL                     QQA+ +   +   +   +P 
Sbjct: 141 LVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAESILTVLQ--EADTLPT 185

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           ++ GD N             ++                    ++       +D  +    
Sbjct: 186 LLIGDLN-------EWRVGKRSSLAALMPTFNHVATAVPSFPSRFPVF--ALDRVL---- 232

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     + +   E       +  SDH P+    D
Sbjct: 233 ------GAPHNLVTSVEVHNTPLARLASDHLPVKAHLD 264


>gi|255530372|ref|YP_003090744.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255343356|gb|ACU02682.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 303

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 82/297 (27%), Gaps = 40/297 (13%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-- 74
            A  A K ++++ NI        +   + +         +          DI+ +QE+  
Sbjct: 32  PAIAAGKHKMLTCNIR-----VDLPEDEQAGFGWNGRKEICAAIMLQQKPDIICMQEVLR 86

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-----QSYP 129
                + K      +   +    +   +        +      K+   +          P
Sbjct: 87  NQNEDLKKALKG-YFSFGFEGPEMDAFTTGYHGIAKNPIFFSEKRYELLSAGGYWLSETP 145

Query: 130 LLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           L+    S+  A  R A  + ++   +GK   V+++HL                     +Q
Sbjct: 146 LMAGSLSWDSARARNANWVRLKDRQSGKDFRVVNLHLDHKSQP------------AREKQ 193

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSR 244
            + +     Q      P ++AGDFN               WK I         P     +
Sbjct: 194 MEMVLADAAQY-PRDYPQLLAGDFNASAENKVYELVISAKWKDIYTTLHGEAEPGYTVHQ 252

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  +    ID+                +           +GK  SDH  +S +
Sbjct: 253 FQGENYSKKGKKIDFIFCKGE---------VTAQSAGILKDNVKGKYPSDHYFVSAE 300


>gi|117644396|emb|CAL37693.1| hypothetical protein [synthetic construct]
 gi|261859534|dbj|BAI46289.1| deoxyribonuclease I-like 1 [synthetic construct]
          Length = 302

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F  +      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181
                     +       R        +       + ++ +H         L   Y    
Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +                      ++ GDFN     L         +           + 
Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +              +   +  +     L   +  +   +    +     +SDH P+ ++
Sbjct: 214 EDTTVRASTHCTYDRV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271

Query: 302 Y 302
            
Sbjct: 272 L 272


>gi|54696840|gb|AAV38792.1| deoxyribonuclease I-like 1 [synthetic construct]
 gi|61365622|gb|AAX42737.1| deoxyribonuclease I-like 1 [synthetic construct]
          Length = 303

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F  +      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181
                     +       R        +       + ++ +H         L   Y    
Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +                      ++ GDFN     L         +           + 
Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +              +   +  +     L   +  +   +    +     +SDH P+ ++
Sbjct: 214 EDTTVRASTHCTYDRV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271

Query: 302 Y 302
            
Sbjct: 272 L 272


>gi|296128411|ref|YP_003635661.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109]
 gi|296020226|gb|ADG73462.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109]
          Length = 264

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 72/303 (23%), Gaps = 70/303 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L +WNIN                   +       + +    D++ LQE        + FP
Sbjct: 3   LATWNIN----------------SIRARVDRAVAFLERTGVDVLALQE---TKVKDEAFP 43

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +  +           +S           +A+  +      +                 RA
Sbjct: 44  REPFEALGYEVATHGYS-------QWNGVAIVSRVGLTDVERGFPGQPTWGDPGVAEARA 96

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KESLV 203
           +          + V  +++ +   ++    TY             L+D        +   
Sbjct: 97  LGATC----GGVRVWSLYVPNGREIEDPHYTYKLD------WLGALRDAAEGWLTADPRA 146

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + GD+N                  +        ++ +  +       +      +  
Sbjct: 147 QVALVGDWNIAPLDTDVWDIARFAGRTHVTPAERQAFEAL-AHAGYSEVSRVHVPAEHTY 205

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                          + ID                        +  + +GK+ SDH P+ 
Sbjct: 206 TYWDYQQLRFPRNEGMRIDLTYASPTLA-------ARVTGVRIERDERKGKQPSDHVPVV 258

Query: 300 IDY 302
           ++ 
Sbjct: 259 LEI 261


>gi|229009858|ref|ZP_04167078.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
 gi|228751476|gb|EEM01282.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
          Length = 263

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 74/269 (27%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--------- 102
                L +  +  D D++ LQE+        V        F         +         
Sbjct: 18  EKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNII 77

Query: 103 ---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  N K I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWK-TRKIVSATIAYNDKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              H             ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHFGW----------WNDEEESFKDQVDRLMERVN----SNELSFLMGDFNNNARLEG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q+      +  
Sbjct: 183 EGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLILSNQSKTVNSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNV---------ISDHFGVEVQLD 262


>gi|330469350|ref|YP_004407093.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328812321|gb|AEB46493.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 236

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 81/281 (28%), Gaps = 60/281 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+VS+N++                    D   L    + L  D++ +QE        +
Sbjct: 9   PLRVVSYNVHG----------------QRDDVAALATVVRQLAPDVLIVQE-----GPRR 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +       ++  L+  +           +++R +   V  Q +PL   +        
Sbjct: 48  FGWRAKSATLAASFGLVVAAGGLPALGNLLLVSLRVRVTGVRHQRFPLTPGRHM------ 101

Query: 143 RRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R A      + G  +  V   HL             +        QA+  K  +     +
Sbjct: 102 RGAAYADCVVGGPARFTVAGSHL-------------ATDPVERPDQAKLFKRELDV---A 145

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            +P + A D N + +              +           +          +  ID   
Sbjct: 146 PLPVIAAADLNEEPDGPAW------CTVAHGLTDAAVAADRADRLTYSCADPRRRIDGVF 199

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D            + + Y+  D     +R SDH PI +D 
Sbjct: 200 VDPR---------ITVVDYDVLDTP-LSRRASDHFPIVVDL 230


>gi|5803007|ref|NP_006721.1| deoxyribonuclease-1-like 1 precursor [Homo sapiens]
 gi|58430942|ref|NP_001009932.1| deoxyribonuclease-1-like 1 precursor [Homo sapiens]
 gi|58430944|ref|NP_001009933.1| deoxyribonuclease-1-like 1 precursor [Homo sapiens]
 gi|58430946|ref|NP_001009934.1| deoxyribonuclease-1-like 1 precursor [Homo sapiens]
 gi|1352319|sp|P49184|DNSL1_HUMAN RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X;
           AltName: Full=Deoxyribonuclease I-like 1; Short=DNase
           I-like 1; AltName: Full=Muscle-specific DNase I-like;
           AltName: Full=XIB; Flags: Precursor
 gi|929628|emb|CAA62037.1| DNase protein [Homo sapiens]
 gi|1620214|gb|AAB17022.1| XIB [Homo sapiens]
 gi|16306751|gb|AAH01561.1| Deoxyribonuclease I-like 1 [Homo sapiens]
 gi|24081084|gb|AAH28092.1| Deoxyribonuclease I-like 1 [Homo sapiens]
 gi|57284183|emb|CAI43204.1| deoxyribonuclease I-like 1 [Homo sapiens]
 gi|119593137|gb|EAW72731.1| deoxyribonuclease I-like 1, isoform CRA_a [Homo sapiens]
 gi|119593138|gb|EAW72732.1| deoxyribonuclease I-like 1, isoform CRA_a [Homo sapiens]
 gi|119593139|gb|EAW72733.1| deoxyribonuclease I-like 1, isoform CRA_a [Homo sapiens]
 gi|119593140|gb|EAW72734.1| deoxyribonuclease I-like 1, isoform CRA_a [Homo sapiens]
 gi|119593141|gb|EAW72735.1| deoxyribonuclease I-like 1, isoform CRA_a [Homo sapiens]
 gi|123981556|gb|ABM82607.1| deoxyribonuclease I-like 1 [synthetic construct]
 gi|123996381|gb|ABM85792.1| deoxyribonuclease I-like 1 [synthetic construct]
          Length = 302

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F  +      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181
                     +       R        +       + ++ +H         L   Y    
Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +                      ++ GDFN     L         +           + 
Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +              +   +  +     L   +  +   +    +     +SDH P+ ++
Sbjct: 214 EDTTVRASTHCTYDRV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271

Query: 302 Y 302
            
Sbjct: 272 L 272


>gi|315612842|ref|ZP_07887753.1| RgfB protein [Streptococcus sanguinis ATCC 49296]
 gi|315314952|gb|EFU62993.1| RgfB protein [Streptococcus sanguinis ATCC 49296]
          Length = 271

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 74/281 (26%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L Q   + D D++  QE+       +V   N +    S                
Sbjct: 17  EEKFQILLQDILDKDYDLICFQEINQEMTSPEVEANNHYQALPSAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ GK++ +  +HL  +         +    +      + L            P ++A
Sbjct: 135 ETEVEGKELALASVHLSWWDKG------FQEEWARFEVVLKDLNK----------PLILA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     +   S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASQLGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                          ++SDH  ++    +
Sbjct: 239 KEL---------EVESLQVVFDGQNSPQVSDHYGLNAVLTW 270


>gi|307180961|gb|EFN68749.1| 2',5'-phosphodiesterase 12 [Camponotus floridanus]
          Length = 565

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 80/320 (25%), Gaps = 38/320 (11%)

Query: 21  AQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            +  R++S+NI          S+                   L+ +     ++DI+ LQE
Sbjct: 242 GRSFRIMSYNILADTYADSDFSKDVLYPYCPQYALDMDYRKQLILKEIIGFNSDIICLQE 301

Query: 74  MGSYNAVAKVFP---KNTWCIFYSTERLINHSKRDSNNDIHT----------AIAVRKKN 120
           +        + P      +   + T+  IN       N              A  +    
Sbjct: 302 VDRSVYEHDLLPSLYMLNYDGVFITKNEINEGLATFFNQERFEKLRFEYSVIAKNIDFPR 361

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              +         K+ F        V  L     +   ++  +   +   D+        
Sbjct: 362 FTTIWSKINNNKTKERFCSRNTTIQVTTLRSKENQSEILIIGNTHLYFKPDADHIRLLQG 421

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------NYLGNNDDFWKTIDP 230
              ++   +  K    +  E  V  ++ GDFN             NY+    + W++   
Sbjct: 422 YYTITYVHEIAKKIQEENPECNVSVLLCGDFNSVPECGIYQLMTKNYVPETCEDWRSNTD 481

Query: 231 N-------DSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNE 282
                      +       +    N        +DY            I    S+     
Sbjct: 482 EAIENVSLTQDLCMSSACGTPQYTNYTPEFSGCLDYIFYEKDKFEVEQIIPMPSKEELTL 541

Query: 283 DDIKSRGKRLSDHCPISIDY 302
                     SDH  +  D 
Sbjct: 542 HTGLPSVVFPSDHISLCADL 561


>gi|111115360|ref|YP_709978.1| exodeoxyribonuclease III [Borrelia afzelii PKo]
 gi|216263647|ref|ZP_03435642.1| exodeoxyribonuclease III [Borrelia afzelii ACA-1]
 gi|110890634|gb|ABH01802.1| exodeoxyribonuclease III [Borrelia afzelii PKo]
 gi|215980491|gb|EEC21312.1| exodeoxyribonuclease III [Borrelia afzelii ACA-1]
          Length = 255

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/304 (9%), Positives = 82/304 (26%), Gaps = 77/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ +    DI+ +QE  +    + +
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVREYTPDILCVQETKALKEQLPR 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +            
Sbjct: 46  DLILENYYSYFSKSKIKGYSGVCIYSK---------------VKPIAVNLLGKEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +      + +   +++ +  +                       ++++ I       
Sbjct: 91  RGLIA-----HYEDFVLINGYFPN-------SQALRRRLVYKLDFLSYVENLIDSFVNDG 138

Query: 203 VPFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              +I GDFN     +                 +  W     N   +   +  +      
Sbjct: 139 KNIIICGDFNIAHTEIDLISPDSNRDSPGYYIEETTWLDSFLNKGYVDTFRIFNKEPGYY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWSYRTRAREKNIGWRIDYFIVNEFFKRNVKKSLILDKV-----------MGSDHCPVF 247

Query: 300 IDYD 303
           ++  
Sbjct: 248 LELT 251


>gi|326497739|dbj|BAK05959.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 524

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 74/302 (24%), Gaps = 55/302 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NA 79
           + ++++++N+    E   ++               L    ++ + D++  QE+       
Sbjct: 255 KTIKVMTYNV-WFREDLELT----------KRMHALGNLIQHHNPDLICFQEVTPNIYQL 303

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + K      +    S    +                   K         P   +      
Sbjct: 304 LQKSGWWQEYKCSLSARMAMQRQYY---------CMQMSKLPVNSFNCIPFSNS------ 348

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      + I G    VL     +   L+S              QA      + + +
Sbjct: 349 VMERELCVGDINIGGVTKMVL-----ATSHLESPCAWNQMYSKERVVQANASMRILDKFR 403

Query: 200 ESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                 +  GD N      G     N       +       +  +  +      N + + 
Sbjct: 404 N----VIFCGDMNWDDKGDGPFPLPNGWIDAWAELKPGEDGWTYDTRANGMLAGNRKLQK 459

Query: 256 PIDYF-------------VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D F             ++ + A   +      + +             SDH  + +  
Sbjct: 460 RLDRFVCKLPDFEIDSIEMIGKEAIPGI-SHYKEKTVRKVVQNIEYPVLPSDHFGLVLSI 518

Query: 303 DF 304
            +
Sbjct: 519 TY 520


>gi|302696131|ref|XP_003037744.1| hypothetical protein SCHCODRAFT_46538 [Schizophyllum commune H4-8]
 gi|300111441|gb|EFJ02842.1| hypothetical protein SCHCODRAFT_46538 [Schizophyllum commune H4-8]
          Length = 442

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 91/313 (29%), Gaps = 38/313 (12%)

Query: 6   VLALVFF-LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +LA+     V   ++ +    ++S N+  L      +  +      T++  L+ Q    +
Sbjct: 8   LLAISLVRSVVAASAASGTFNILSMNVAGLPAILNGNGEEGDK---TTNTNLIGQNMAKI 64

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
             D++ +QE  +Y+A       + +    S            +N        R K     
Sbjct: 65  GYDLIHVQEDFNYHAALYAADTHPYRTATSGGVPFGSGLNTLSNSDWVDF-SRTKWATCS 123

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             S         F+    R          G  I  +++H  +    +      +      
Sbjct: 124 DASESDCLTPKGFTFMRWRV-------DEGVYIDAINLHADAGTEDEDNVARSAN----- 171

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                 ++D+I     +    ++ GD N +      +      +        + K     
Sbjct: 172 ---LDQVRDFIAAN-SAGNAVLVFGDTNSRYTRA-VDTGIRDLVADEGMTDAWVKHARGG 226

Query: 245 CNA------------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK-SRGKR 291
                               +   +D      +    L+    ++  Y+ D      G  
Sbjct: 227 SPPEGGADALLCPDGVPANISCETVDKVFFRGS---KLLDLQSTDFFYDTDRFLSENGTL 283

Query: 292 LSDHCPISIDYDF 304
           L+DH P+ +++ +
Sbjct: 284 LTDHNPVRVEFSW 296


>gi|326929306|ref|XP_003210808.1| PREDICTED: deoxyribonuclease-1-like [Meleagris gallopavo]
          Length = 284

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 76/283 (26%), Gaps = 32/283 (11%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           + ++NI T           +S     +    +         DI  +QE+   +       
Sbjct: 25  ISAFNIRTFG---------DSKMSNQTIADFIVSILVEY--DITLVQEVRDADLSSVNKL 73

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +   N    +  +        R+S  + +     R   V VL+  Y   G +   +   +
Sbjct: 74  ISQLNRASSYPYSFLSSIPLGRNSYKEQYV-FIYRSDIVSVLESYYYDDGCESCGTDIFS 132

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +       ++    I        ++         + +S  A    D   +   + 
Sbjct: 133 REPFIVKFSSPTTQVDEFVIVPLHAEPSNAP--------AEISALADVYTDVTDKWATNN 184

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
                 GDFN   +Y+         +    S      +       + +       D  V 
Sbjct: 185 --IFFMGDFNADCSYVTAEQWPSIRLRSLSSCEWLIPDSADTTVTSTDCAY----DRIVA 238

Query: 263 -DQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDY 302
                 + +   S     + E           +SDH P+ +  
Sbjct: 239 CGSALRQAVEYGSAKVNNFQETLHIQNKDALAISDHFPVEVTL 281


>gi|288926600|ref|ZP_06420516.1| endonuclease/Exonuclease/phosphatase [Prevotella buccae D17]
 gi|288336622|gb|EFC74992.1| endonuclease/Exonuclease/phosphatase [Prevotella buccae D17]
          Length = 312

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/308 (9%), Positives = 81/308 (26%), Gaps = 46/308 (14%)

Query: 30  NINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLD--------ADIVF 70
           N   L +    SL  ++             R       + +    L          D+V 
Sbjct: 16  NCENLFDTRHDSLKNDTEFLPEGSHHWTRTRYWHKLNDIGREIIALGDDSAGWRLPDVVA 75

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           + E+ + + +  +  ++          + +     S ++    +A+    V     S+  
Sbjct: 76  MCEVENDSVMYDLTKRSLLRKARYEYLMTD-----SPDERGIDVALMYNPVTFRPLSHHA 130

Query: 131 LGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +           R  + +   +     + +  +H  S    +     +          A 
Sbjct: 131 IRIPLLPDMRPTRDILYVAGLVGEADTLHLFVVHAPSRMGGERASRPFRLQVVRRLITAI 190

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                +          ++AGDFN   +    +  +   I    ++    +  +      +
Sbjct: 191 DSIRLLQ----PDAQIILAGDFNDYADSPALDSLY---IHDMHNVSATARGANGARGTYR 243

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------------NEDDIKSRGKRLSDH 295
                  +D  +   +    L+     ++ +                       +  SDH
Sbjct: 244 FRGEWGSLDQIICSLSVAGKLVDCRIGDLPFLLEEDEKYGGVHPRRTYLGPKYQRGFSDH 303

Query: 296 CPISIDYD 303
            P+   ++
Sbjct: 304 LPLVARFN 311


>gi|242005512|ref|XP_002423609.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus
           corporis]
 gi|212506757|gb|EEB10871.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus
           corporis]
          Length = 559

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 87/328 (26%), Gaps = 40/328 (12%)

Query: 17  TASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           + +  +K+R+V +NI          ++    +   +      +   LL       ++DI+
Sbjct: 230 SETKPEKIRVVCYNILADTYTNTKEAKNSIFAYCNSDALDLENRKRLLLTELTGYNSDII 289

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYS------------TERLINHSKRDSNNDIH-TAIAV 116
            LQE+          P   +  F S                        ++  +  A+ +
Sbjct: 290 CLQEVDKKLYDTVFLPFCNFKNFNSVYNKKEGFREGCAMFYKKSKFEFIDHVQYLYAVEL 349

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI--WVLDIHLKSFCFLDSLE 174
           +   +    +       K        +  ++++V  +      +++  +   +   D+  
Sbjct: 350 KNNKIFKNLKEIIYNNNKLVTRLNSLQTLLQVVVLKSLTSANDYLVVGNTHLYFHPDADH 409

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------YLGNND 222
                             +   +  +  V  +  GDFN   +                 D
Sbjct: 410 IRLLQGIMGFDLLNNTANELKRKLPDINVSIIFCGDFNSTPDCGVYKYITEGYIEGSEID 469

Query: 223 DFWKTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                 +  D        K      +    N     K  +DY     N  +      F  
Sbjct: 470 WKSNLEEAVDGYSANHSVKMISACGTPEFTNYTKGFKACLDYIYFQNNRLELESFVPFPS 529

Query: 278 I-LYNEDDIKSRGKRLSDHCPISIDYDF 304
           +   + +         SDH  +  D  +
Sbjct: 530 LDDLSREVALPSTFFPSDHVALIADLKW 557


>gi|198420194|ref|XP_002123983.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair
           enzyme) 1 [Ciona intestinalis]
          Length = 337

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 71/301 (23%), Gaps = 74/301 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+  +                        ++ K    DI  LQE          
Sbjct: 82  LKISSWNVAGVRAWVKKDG---------------VKWVKGESPDIFTLQETKCSE----- 121

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K+        +          +    + + +  K   +  +    +   D   R    
Sbjct: 122 --KDIPQELKDLKEYHMSWNVAKSTKGFSGVGLFSKVKPLEVKFGIGVEEHDQEGR---- 175

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +     K +++  ++ +               S      + L        +   
Sbjct: 176 -----TITAEYDKFYLVSTYVPNAQRGLKRLEYRLKWNSDFLAYIKSL--------DEKK 222

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N   + +                   D    +  +     +           
Sbjct: 223 PVVLCGDMNVSHHEIDLANPKGNKKNAGFSQEERDGMTELLQSGFTDTYRDLYPDLTGQY 282

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            +DYF++       +            D+I       SDHCPI+
Sbjct: 283 TFWTYMGNCRAKNVGWRLDYFILSNKWKDNVC-----------DNIIETSAMGSDHCPIT 331

Query: 300 I 300
           +
Sbjct: 332 L 332


>gi|160871859|ref|ZP_02061991.1| exodeoxyribonuclease III [Rickettsiella grylli]
 gi|159120658|gb|EDP45996.1| exodeoxyribonuclease III [Rickettsiella grylli]
          Length = 254

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 93/307 (30%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AVAK 82
           +R++S N+N +        +               ++ K+ DAD+V LQE  +    +  
Sbjct: 1   MRIISLNVNGIRSAARKGFF---------------EWLKHQDADVVCLQETKAQKHQLND 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++       +          + +A+  +            G   + +    
Sbjct: 46  SVFIQGYEAYFFDAEKKGY----------SGVAIYSRLKPNNVT----TGLGWACADKEG 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      ++++  ++ +  +++ S    +S +        L  Q        + ++++  
Sbjct: 92  RY-----IQLHFSQLSIASLYMPSGSSGESRQ-------RLKFQFLDSYLPILKKQRQQA 139

Query: 203 VPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             F+I GD+N                             + + P   +  F        +
Sbjct: 140 GDFIICGDWNIAHKPIDLKNWRCNQKNSGFLPQERAWLTQVLGPIGYVDAFRALNPQP-D 198

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 ++           IDY ++ +     +                 + +R SDH P
Sbjct: 199 HYTWWSHRGRAWENNVGWRIDYQIVSKEIKNKIKSAMI-----------YKDQRFSDHAP 247

Query: 298 ISIDYDF 304
           + IDY+F
Sbjct: 248 LIIDYNF 254


>gi|61355637|gb|AAX41160.1| deoxyribonuclease I-like 1 [synthetic construct]
          Length = 302

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 40/301 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F  +      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181
                     +       R        +       + ++ +H         L   Y    
Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +                      ++ GDFN     L         +           + 
Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADG 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +              +   +  +     L   +  +   +    +     +SDH P+ ++
Sbjct: 214 EDTTVLASTHCTYDRV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271

Query: 302 Y 302
            
Sbjct: 272 L 272


>gi|223932635|ref|ZP_03624635.1| Endonuclease/exonuclease/phosphatase [Streptococcus suis 89/1591]
 gi|330832220|ref|YP_004401045.1| endonuclease/exonuclease/phosphatase [Streptococcus suis ST3]
 gi|223898745|gb|EEF65106.1| Endonuclease/exonuclease/phosphatase [Streptococcus suis 89/1591]
 gi|329306443|gb|AEB80859.1| Endonuclease/exonuclease/phosphatase [Streptococcus suis ST3]
          Length = 263

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 81/298 (27%), Gaps = 54/298 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79
           ++L++ N++  L             +R      +L +       D++ LQE+    + + 
Sbjct: 1   MKLLTINVHAWL------------EERQDEKLDVLAKTIAEKAYDVIALQEVNQLITADL 48

Query: 80  VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           V K    + + +                   +     +     IA   K        +  
Sbjct: 49  VTKDLKADNYGLILLEKLRALGQFDYSYYWSNSHIGYDKYEEGIAFLTKLPVYEVDPF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                S     +R+ + L V    + I +   H+      +  +     +    +     
Sbjct: 108 CSQNKSVDSILSRKIMGLTVFYQDQLIDLYSCHINLPGSEEEDQLDNVRTIVERT----- 162

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
                     +    ++ GDFN          +    +   DS     ++          
Sbjct: 163 ---------GNRRFKILMGDFNTDAFSDREAYEAITELGLYDSYNLAMEKDQGITVEKAI 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +       +  +DY  ++Q          F+               +SDH  + ++ +
Sbjct: 214 DGWAGHSQEKRLDYIFLNQKKEVLSSLVIFNGENRPI---------ISDHFGVEVEIN 262


>gi|227532810|ref|ZP_03962859.1| endonuclease/exonuclease/phosphatase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239630649|ref|ZP_04673680.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|227189551|gb|EEI69618.1| endonuclease/exonuclease/phosphatase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239526932|gb|EEQ65933.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 355

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 89/324 (27%), Gaps = 65/324 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            Q    +++NI               G      S K   +    + +  +  + D+ F Q
Sbjct: 52  GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRAYSKKSVRTSINGVIKTTQAQNPDVAFYQ 111

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTER-----------LINHSKRDSNNDIHTAIAVRKKNV 121
           E+      ++   +         +             + +          + I    K  
Sbjct: 112 EIDPDGDRSQHVNEVKMVTGAQQQYANIYGQNYDSAYLFYPFTQPIGKAKSGILTLSKAK 171

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP 179
               + Y L    D        RA         NGK+  +++IH+ +F            
Sbjct: 172 VDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAFTPN--------- 222

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              +   Q   L  +I Q  +     ++AGD+N ++          K +D   + +    
Sbjct: 223 -VKIQQAQFTKLFKYIEQAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPKS 281

Query: 240 EKDSRCN--------------------ANKNLRNKIPID-YFVMDQNAYKFLIQESFSEI 278
           +  +  +                              ID Y +   N    +  ES   +
Sbjct: 282 KLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYIL-SPN----IKAESVHVV 336

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
                     G + SDH P+ + +
Sbjct: 337 ST--------GFQYSDHNPVVLKF 352


>gi|253698977|ref|YP_003020166.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
 gi|251773827|gb|ACT16408.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
          Length = 343

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 80/293 (27%), Gaps = 56/293 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +R+++WNI                     D   L +  +    DIV  Q+      
Sbjct: 91  SGTPLRVMTWNIKY----------------GKHDLMPLVEELERSRPDIVLFQDAVR--- 131

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                       ++    L +  +    +    + A   +     ++    L  K     
Sbjct: 132 ----AGAGPLAGYFRDWHLRSRGQYLIASRYPLSAAEVFELPYSGRRKEYFLRCKVLVGS 187

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           +      ++  +   + +           ++      +  + +L   QA+ +  +I+   
Sbjct: 188 SEI-SLYDVHFKTPRRSLNAFRKAKHGPWYIPGAVERFEDNVTLRLIQARTVAGYIS--- 243

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR------- 252
               P ++AGD N       +     +T+        F            +         
Sbjct: 244 RETGPVLVAGDLN-----SPDPSLVCRTLREAGLADAFAAAGKGYGYTYGHFLLKNRIPW 298

Query: 253 ---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + + ID+ + +     +L+                   R SDH P+  D+
Sbjct: 299 LRVSWMRIDHIMTN----SWLVASRCRV----------GTGRASDHRPVIADF 337


>gi|291234351|ref|XP_002737114.1| PREDICTED: deoxyribonuclease I-like [Saccoglossus kowalevskii]
          Length = 472

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 93/311 (29%), Gaps = 42/311 (13%)

Query: 2   IRKYVLALVFFLVPCTAS-----VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + KY   L+  +  C A          + + ++N+              S    +    +
Sbjct: 19  VMKYSTYLLILISCCFAPNLVCGEIDDLYIAAFNVEMFG---------QSKMSDSDVVDV 69

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAI 114
           L Q       DI+ +QE+      A +   +       +E LI  S R   S++    A 
Sbjct: 70  LTQIVHRY--DIILIQEIRDIAGTAILDLLSEVNSVSDSEYLIATSNRLGRSSSKEQYAF 127

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
             R   V +    +      D       R    + V      I    +        D   
Sbjct: 128 LYRSDKVTITDTYHY-----DDVDDKFEREPFIVRVSSASTVITDFAMVAIHVKPSD--- 179

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                +   +        D +T+        +I GDFN   +Y+ + D+    +  ++  
Sbjct: 180 -----AVQEIDTLLDVYDDTVTRWNLED--VIILGDFNAGCDYVTSWDNIR--LRTDNRF 230

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291
                ++     +  N       D  V+      + +   S     +++    S  +   
Sbjct: 231 TWLISDRADTTVSRLNCPY----DRIVVAGATMLQSVWPGSSDVFYFDQAYGLSYDQTND 286

Query: 292 LSDHCPISIDY 302
           +SDH P+ +  
Sbjct: 287 VSDHYPVELKI 297


>gi|225707660|gb|ACO09676.1| Deoxyribonuclease gamma precursor [Osmerus mordax]
          Length = 268

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 80/288 (27%), Gaps = 37/288 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------Y 77
           +++ ++NI                        +L +       DI+ + E+         
Sbjct: 1   MKVAAFNIQKFGTN---------KVSDPQILPILIKIVSRY--DIIVILEVVDAKGKSVK 49

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + ++   N    +  T  +     R    + +     R   V ++  +Y     +   
Sbjct: 50  TFLQELNKANKEHRY--TMEISTRLGRTRYKEQYL-FLYRDDVVDLI-GTYQFADKQAGQ 105

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             A  R    L  + +      +   L                  L        + W   
Sbjct: 106 EDAFAREPYVLRFKCHNT----VMNDLVLMPVHTKPVEAEKELDELYDVFLDVKRKW--- 158

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   +I GDFN   +Y+   +     I  + +      +         N +N    
Sbjct: 159 ---GTDNIMILGDFNADGSYVSKKEMKLIRIRSDKNFHWLISDDVDTT---ANHKNDHTY 212

Query: 258 DYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
           D  V+   +    ++  S     + ++   +  + L  SDH P+ ++ 
Sbjct: 213 DRIVVYGDDMLAAVVPNSAKPFNFQQEYGLTNAQTLDVSDHYPVEVEL 260


>gi|330920551|ref|XP_003299056.1| hypothetical protein PTT_09967 [Pyrenophora teres f. teres 0-1]
 gi|311327471|gb|EFQ92889.1| hypothetical protein PTT_09967 [Pyrenophora teres f. teres 0-1]
          Length = 634

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 85/338 (25%), Gaps = 80/338 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           VR+ +WN+N +    G   W      TT  +  +    +   ADIV +QE  +   +   
Sbjct: 2   VRITTWNVNGIRNPFGYKPW-----STTRTFNAMFDILE---ADIVIMQELKIQRKDLTD 53

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRV-----LQQSYPLLGAKD 135
            +     W  ++S  +    +S             +R +   +        S P      
Sbjct: 54  DMVLVPGWDCYFSLPKHKKGYSGVGIYTRQSVCAPIRAEEGVLGALCPPNSSTPYRDLPG 113

Query: 136 SFSRAGNRRA---------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           S S  G   A         ++     +  +  VL+        + S  N+          
Sbjct: 114 SASIGGYLSASQIASLPPDLDADSLDSEGRCLVLEFPAFVLFGVYSPANSNGQRDGFRLG 173

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGNNDDF 224
               L+  I    +     ++ GD N   +                         N   F
Sbjct: 174 FLTALETRIRNLTKMGKNVILTGDLNVSRDLIDTAKAEDNMRAEGMTHAEYLSTPNRRIF 233

Query: 225 WKTIDPND-------------SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVM 262
            + +   +                   +    R     +               ID+ + 
Sbjct: 234 NQLLLNGNVPGERDQGREEPVLYDLCREFHPDREGMFTHWEQKINARPGNFGSRIDFILC 293

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 +    +              G   SDHCP+  
Sbjct: 294 SLAMKDWFKDANIQ-----------EGLMGSDHCPVYA 320


>gi|256833058|ref|YP_003161785.1| Endonuclease/exonuclease/phosphatase [Jonesia denitrificans DSM
           20603]
 gi|256686589|gb|ACV09482.1| Endonuclease/exonuclease/phosphatase [Jonesia denitrificans DSM
           20603]
          Length = 571

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 88/320 (27%), Gaps = 59/320 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR-TTSDYTLLRQYAKNLDADIVFLQE 73
             + + AQK+R  ++N         V+  KN   R  T     +        AD++  QE
Sbjct: 261 TPSGTSAQKLRFATYN------AGSVNATKNLAGRAWTHRQPAVVNAVHRSQADVIAFQE 314

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---------IAVRKKNVRVL 124
           +    A       +      +      +S   ++  I TA         I  R   VR++
Sbjct: 315 V--TTARVNGDSGDRQYQALAKALAPTYSSVLTDKQIGTAPGATSKGAHIFYRSDKVRLI 372

Query: 125 QQ-------SYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLEN 175
                       +   K +  +   +  V  L+E     ++ +V+  HL +         
Sbjct: 373 TSGLVANDTVTSIAHLKSATEQETVKHFVWALLENTATKERFYVVSAHLPNSSAP----- 427

Query: 176 TYSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
               S  L     Q +  +++ K   S +P V+ GD N  +         W  +      
Sbjct: 428 ---ESQRLRLGITQGIHGYMSGKPGASTLPIVLMGDLNTDVGRYPTGPTTW--LRQQGYY 482

Query: 235 IRF------------------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                                  +                ID+  +  +           
Sbjct: 483 SAAHAVQQRNIRLGTTNNQYHTVDGGYPARPFTYAYVGTRIDHIFIKNSPGAASYDNQV- 541

Query: 277 EILYNEDDIKSRGKRLSDHC 296
             +   +       R SDH 
Sbjct: 542 --VLRSNGTFDERFRGSDHN 559


>gi|225869051|ref|YP_002744999.1| exodeoxyribonuclease [Streptococcus equi subsp. zooepidemicus]
 gi|225702327|emb|CAX00133.1| exodeoxyribonuclease [Streptococcus equi subsp. zooepidemicus]
          Length = 275

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVLDSLVAQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +   ++     +  S  +     +       K       ++P +GA  +    G  
Sbjct: 55  KHLESLLGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        ++  
Sbjct: 114 -----IITLEFDDFFVTQVYTPNAGDGLRRLEERQLWDQKYADYLAQL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 SWWAQRSKTSKLNNTGWRIDYWLTSNRLIDKVSRSEMISSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 LLEID 274


>gi|15674547|ref|NP_268721.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes M1 GAS]
 gi|13621652|gb|AAK33442.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes M1 GAS]
          Length = 275

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               T   ++     +  S  +     +       KN      ++P +GA  +    G  
Sbjct: 55  KHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +V  ++  +        +         +     L        ++  
Sbjct: 114 -----IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWDHKYADYLTEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        +  
Sbjct: 161 PVLATGDYNVAHKEIDLANPNSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMISSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            +D D
Sbjct: 270 LLDID 274


>gi|325519880|gb|EGC99152.1| exodeoxyribonuclease III [Burkholderia sp. TJI49]
          Length = 257

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 82/305 (26%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +               ++    +AD V +QE+         
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIK-------- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +     +      +    ++   +  ++         ++G   S      R
Sbjct: 39  VSADDLPAEFVEPHGLRSYFHHAAKKGYSGAGLYSRHEPDDV----IIGFGSSEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ ++ +++ S    +  +                L        +   
Sbjct: 95  Y-----VEARYGKLSIVSVYVPSGSSGEERQQAKYRFMDAFMPHLAEL--------KKKR 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +  +   +   +  D R    
Sbjct: 142 EVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDDVGYVDVFRTLDPRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +            S             +  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSTSI-----------FKDIKFSDHAPLT 250

Query: 300 IDYDF 304
           +DYD+
Sbjct: 251 VDYDY 255


>gi|307721179|ref|YP_003892319.1| exodeoxyribonuclease III [Sulfurimonas autotrophica DSM 16294]
 gi|306979272|gb|ADN09307.1| exodeoxyribonuclease III [Sulfurimonas autotrophica DSM 16294]
          Length = 258

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 89/310 (28%), Gaps = 81/310 (26%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78
           +  + ++SWN+N                R  ++   L ++    D  I+ LQE+      
Sbjct: 2   SDSIEIISWNVNG--------------IRAVANKEAL-KWIDERDTGILCLQEIKAQKEQ 46

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +F K    +  ++     +S   + + + +                      D  +
Sbjct: 47  IPDNLFEKEFSEVIINSGERKGYSGTATYSMLKSDYTS---------------TCNDIDT 91

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           +   R      +E +   I + +++  +    +          +   +       +  Q 
Sbjct: 92  KHEGRI-----IETHYGDIVLFNVYFPNGQKDEER-------LAYKMKFYDDFLAYCEQL 139

Query: 199 KESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKD 242
           K+     ++ GD N     +                   +   K ++ +  +  F     
Sbjct: 140 KDEGKSIIVCGDVNTAHREIDLKNPKANSKTSGFLPIEREWIDKFLN-HGYIDTFRYVHG 198

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            + +A      +           IDYF + ++  + L      + +             S
Sbjct: 199 DKEDAYSWWSYRFNARVKNVGWRIDYFFISEDLAENLEDAFILDYI-----------EGS 247

Query: 294 DHCPISIDYD 303
           DHCPI I   
Sbjct: 248 DHCPIGIRIT 257


>gi|54293631|ref|YP_126046.1| hypothetical protein lpl0684 [Legionella pneumophila str. Lens]
 gi|54296671|ref|YP_123040.1| hypothetical protein lpp0702 [Legionella pneumophila str. Paris]
 gi|148360699|ref|YP_001251906.1| exodeoxyribonuclease III [Legionella pneumophila str. Corby]
 gi|296106236|ref|YP_003617936.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy]
 gi|53750456|emb|CAH11850.1| hypothetical protein lpp0702 [Legionella pneumophila str. Paris]
 gi|53753463|emb|CAH14918.1| hypothetical protein lpl0684 [Legionella pneumophila str. Lens]
 gi|148282472|gb|ABQ56560.1| exodeoxyribonuclease III [Legionella pneumophila str. Corby]
 gi|158512141|gb|ABW69102.1| exodeoxyribonuclease III [Legionella pneumophila]
 gi|295648137|gb|ADG23984.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy]
 gi|307609445|emb|CBW98939.1| hypothetical protein LPW_07241 [Legionella pneumophila 130b]
          Length = 260

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 86/303 (28%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N N +        +                +    D D V +QE  S   V ++
Sbjct: 1   MKVISFNANGIRSSARNGFY---------------DWLVGQDVDFVCIQETKSQ--VEQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +       R       D+    ++ +A+  K   V        G    +     R
Sbjct: 44  IPEELYF-----PRDYFCDYFDAEKKGYSGVAIYSKYKPVRIVK----GLGFDYCDKEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ +  K+ V+ ++L S    +  +        +     +     +   K    
Sbjct: 95  Y-----IQFDYPKLSVISLYLPSGTSGEDRQ-------EVKYAFLEQFARHLMNLKNEGR 142

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD+N                   +L     +   +  +   +   +  +      
Sbjct: 143 ELIICGDYNIAHKKIDLKNWRGNQKNSGFLPEERAWMDELFGSMGFVDAFRVHNQEEEQY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY V+                 Y  D    R  R SDH P+ 
Sbjct: 203 TWWSYRARAWEKNVGWRIDYQVITPGL-----------TEYVADSRIFREARFSDHAPLM 251

Query: 300 IDY 302
           I+Y
Sbjct: 252 IEY 254


>gi|296419379|ref|XP_002839288.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635411|emb|CAZ83479.1| unnamed protein product [Tuber melanosporum]
          Length = 461

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/326 (10%), Positives = 88/326 (26%), Gaps = 35/326 (10%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M+R +V+  + F     A+ +  +R + +N+  L               +    T + + 
Sbjct: 1   MLRTWVIGSLLF--TVEAASSGSLRTLLYNVAGLPGTPLPLSPIFPSSSSFFRLT-ISEL 57

Query: 61  AKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             +           Q + +Y+ +      N     Y+++   + +           +   
Sbjct: 58  LSSSRPSRNTPYISQRLANYDLINVQEDFNYHAALYASDAHPHRTPTSGGVPFGDGLNTL 117

Query: 118 KKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLEN 175
                +            +S      +    + V++     + V ++H  +         
Sbjct: 118 SNFPFMDFTRIGWTDCFINSGDCLTPKGFTFMRVQLDPHVWVDVYNLHTDAGS------- 170

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
             S       +    +   I     + +P VI GD N +   + ++     +        
Sbjct: 171 -QSEDRKARRENVAQIVKHINTF-SAGMPVVIMGDTNMRYTTISDSARALVSGAAATDAW 228

Query: 236 RFPKEK-----------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
               +                   S       L     +D  +   +     +  +    
Sbjct: 229 VQTWKGGVAPAEDGVALSCPFPFPSTVTDQATLSACETVDKILYRSS-PVLTLNATGMTN 287

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304
            +      +    LSDH P+S   ++
Sbjct: 288 EHRVFVHPTTDDPLSDHYPLSATLEW 313


>gi|290789946|pdb|3G00|A Chain A, Mth0212 In Complex With A 9bp Blunt End Dsdna At 1.7
           Angstrom
 gi|290789947|pdb|3G00|B Chain B, Mth0212 In Complex With A 9bp Blunt End Dsdna At 1.7
           Angstrom
 gi|290789951|pdb|3G0R|A Chain A, Complex Of Mth0212 And An 8bp Dsdna With Distorted Ends
 gi|290789952|pdb|3G0R|B Chain B, Complex Of Mth0212 And An 8bp Dsdna With Distorted Ends
 gi|290789960|pdb|3G2D|A Chain A, Complex Of Mth0212 And A 4 Bp Dsdna With 3'-Overhang
 gi|290789961|pdb|3G2D|B Chain B, Complex Of Mth0212 And A 4 Bp Dsdna With 3'-Overhang
 gi|290789966|pdb|3G38|A Chain A, The Catalytically Inactive Mutant Mth0212 (D151n) In
           Complex With An 8 Bp Dsdna
 gi|290789983|pdb|3G8V|A Chain A, The Rationally Designed Catalytically Inactive Mutant
           Mth0212(D151n)
 gi|290789985|pdb|3GA6|A Chain A, Mth0212 In Complex With Two Dna Helices
 gi|290789986|pdb|3GA6|B Chain B, Mth0212 In Complex With Two Dna Helices
          Length = 265

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 82/302 (27%), Gaps = 81/302 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++++SWN+N L                        ++      DI+ LQE+ +       
Sbjct: 4   LKIISWNVNGLRAVHRKGF---------------LKWFMEEKPDILCLQEIKAAPEQLPR 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+     +  F++      +          + +A+  K      +    +   D+  R  
Sbjct: 49  KLRHVEGYRSFFTPAERKGY----------SGVAMYTKVPPSSLREGFGVERFDTEGRIQ 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                      +     + +I+  +    +              +      + + ++++S
Sbjct: 99  I---------ADFDDFLLYNIYFPNGKMSEER-------LKYKLEFYDAFLEDVNRERDS 142

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
               +I G+FN     +                       K I+     +   +  +S  
Sbjct: 143 GRNVIICGNFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENG--YVDTFRMFNSDP 200

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           +DYF +++     + +                    SDHC
Sbjct: 201 GQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL-----------SDVMGSDHC 249

Query: 297 PI 298
           PI
Sbjct: 250 PI 251


>gi|302408026|ref|XP_003001848.1| endonuclease/exonuclease/phosphatase family protein [Verticillium
           albo-atrum VaMs.102]
 gi|261359569|gb|EEY21997.1| endonuclease/exonuclease/phosphatase family protein [Verticillium
           albo-atrum VaMs.102]
          Length = 556

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 78/283 (27%), Gaps = 38/283 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +   S+N+  L             +        +  Y K    D++FLQE+   N     
Sbjct: 293 ITFGSYNVENLWPG---------SEHLPDVADQIVDYLKT--PDLIFLQEVQDSNGPTND 341

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N      +           +  +  + +     NV  ++         +  +     
Sbjct: 342 LIVNANITLAT---------LAAAIEERSGVVYEWLNVDPIRNQDVARLGGNIQTGRKPL 392

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ- 197
            A    ++    K  + +++H  S     +L     P           Q   +  +I   
Sbjct: 393 AASWRAIKGPKTKPFFTINVHNGSKGGSSTLHGDNRPPINNGVDKRLLQTGSIGAFIDTL 452

Query: 198 -KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NANKNLRNK 254
             K+     V++GDFN             K +     L    K         +     N 
Sbjct: 453 YAKDPKARIVVSGDFNEFAFVAP-----MKLLTEKHKLTSLSKHSLPATERYSYVFDGNA 507

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +D+ ++  +     + +       +    +     +SDH P
Sbjct: 508 QQLDHMLISPSL----VNDKAKLEHIHVSSWRRFADVVSDHDP 546


>gi|254710717|ref|ZP_05172528.1| Endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94]
 gi|256029100|ref|ZP_05442714.1| Endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M292/94/1]
 gi|260567698|ref|ZP_05838167.1| endonuclease/exonuclease/phosphatase family protein [Brucella suis
           bv. 4 str. 40]
 gi|261318286|ref|ZP_05957483.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94]
 gi|265986084|ref|ZP_06098641.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M292/94/1]
 gi|260154363|gb|EEW89444.1| endonuclease/exonuclease/phosphatase family protein [Brucella suis
           bv. 4 str. 40]
 gi|261297509|gb|EEY01006.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94]
 gi|264658281|gb|EEZ28542.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M292/94/1]
          Length = 285

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 67/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIALQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLREGVVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSALQ--EA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 181 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATTVPSFPSRFPVLALDR 230

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              + I   E       +  SDH PI    D
Sbjct: 231 VL----------GAPDNLITSVEVHNTPLARLASDHLPIKAHLD 264


>gi|84874690|ref|NP_001033723.1| deoxyribonuclease-1-like 1 precursor [Bos taurus]
 gi|91206581|sp|Q2QDE9|DNSL1_BOVIN RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X;
           AltName: Full=Deoxyribonuclease I-like 1; Short=DNase
           I-like 1; Flags: Precursor
 gi|73921492|gb|AAZ94276.1| DNase X [Bos taurus]
          Length = 316

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 71/289 (24%), Gaps = 33/289 (11%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           AS A+  R+ ++N   L+          +          L +       DI+ LQE+   
Sbjct: 23  ASGAETFRICAFNAQRLTL---------AKVAREPVLDTLVKILARC--DIMVLQEVVDS 71

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLLGAKDS 136
           +  A          F  +    +HS        +        ++     +   +   +D 
Sbjct: 72  SDTAIPLLLRELNRFGDSGPYASHSSLLLGRSTYKEKYVYLYRSHEAEVRDSYMYDDQD- 130

Query: 137 FSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 R        +  K    + ++ +H         L   Y        +       
Sbjct: 131 --DLFTREPFVCWFSLRSKVLPSLVLVPLHTTPKAVETELNALYDVFLDASGRW------ 182

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                       ++ GDFN     L         +           +             
Sbjct: 183 -------QTKDVILLGDFNADCTSLTKKRLDDLVLRTQAGFHWAIADGVDTTVRASTHCT 235

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              I   +  +     L   +  +   +    +     +SDH P+ +D 
Sbjct: 236 YDRI--VLHGELLQSLLRGAAAFDFPQSFGLTEQEALNISDHYPVEVDL 282


>gi|29420517|dbj|BAC66502.1| DNA lyase [Isaria tenuipes]
          Length = 611

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/323 (12%), Positives = 76/323 (23%), Gaps = 80/323 (24%)

Query: 41  SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERL 98
           + +     R    +  +    +   ADIV LQE  +   +    +     W  ++S   L
Sbjct: 7   NPFGYQPWREKRTFQAMFDILE---ADIVILQETKIQRKDLQDDMVLVPGWDAYFS---L 60

Query: 99  INHSKRDSNNDIHTAIAVRKKN-----------VRVLQQSYPLLGAKDSFSRAGNRRAV- 146
             H K  S   I+T  A                       Y  L              + 
Sbjct: 61  PQHKKGYSGVAIYTRNATCAPILAEEGILGILCPPKSNTPYRELPEDRQIGGYPTLAQLN 120

Query: 147 ----ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
               E L++  G+ + +L+        + S  N             + L+  I     + 
Sbjct: 121 GDVDEALLDSEGRCL-ILEFPAFVLFGIYSPANRDESRIEFRQNFVEALEARIRNLITAG 179

Query: 203 VPFVIAGDFN----------------------RKINYLGNNDDFWKTIDPNDSL------ 234
              ++ GD N                       +   +       + +     +      
Sbjct: 180 KEVILTGDLNIIRSEMDSSNIAEGLRKEGMTMDEWQSMPTRRILNQLLFDGTVIGPRDKA 239

Query: 235 ------------IRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEI 278
                           +     C   K           IDY +       + +  +    
Sbjct: 240 REDGVLWDICRCFHPTRRGMHTCWDTKRNTRPANLGSRIDYILCSDGIKDWFVDSNIQ-- 297

Query: 279 LYNEDDIKSRGKRLSDHCPISID 301
                     G   SDHCP+   
Sbjct: 298 ---------EGLMGSDHCPVYAT 311


>gi|218281326|ref|ZP_03487814.1| hypothetical protein EUBIFOR_00379 [Eubacterium biforme DSM 3989]
 gi|218217511|gb|EEC91049.1| hypothetical protein EUBIFOR_00379 [Eubacterium biforme DSM 3989]
          Length = 249

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 85/303 (28%), Gaps = 78/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N +                        +    LDADI  +QE  +     +V
Sbjct: 1   MKCISWNVNGIRAVLKKDF---------------VEILYALDADIFCIQETKAQPDQIEV 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +     + ++ +   +          +   +  K   +  +    +   D+  R    
Sbjct: 46  DCELYPYQYINSAQKKGY----------SGTMIFCKEEPLSIRYGMNMEEHDTEGR---- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +V+ ++  +        +         S   + L            
Sbjct: 92  -----VITLEYPEYYVVTVYTPNSGDGLKRLDYRMEWDKAFSAYLKSL----------DK 136

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN----------DSLIRFPKEKDSRCNA----NK 249
           P +  GDFN     +   +      +            ++L+ +  +             
Sbjct: 137 PVMACGDFNVANEEIDIKNPKTNHKNAGFTDEERNSFKENLLAYFVDTYRSLYPEKVEYS 196

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY+++       ++       +Y            SDHCP+ +
Sbjct: 197 WWSYRFKAREKNAGWRIDYWLVSPELKDKIVDAKILTDIY-----------GSDHCPVQL 245

Query: 301 DYD 303
           D +
Sbjct: 246 DIE 248


>gi|149637217|ref|XP_001511095.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 639

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 77/326 (23%), Gaps = 55/326 (16%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI         LS                    L+++      AD++ LQE+  
Sbjct: 323 IRTVSYNILADAYAQTELSRTVLYPYCAPYALELDYRQNLIQKELTGYSADLICLQEVDR 382

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKD 135
                 + P           ++              A  ++  ++   L Q+        
Sbjct: 383 PVFSDSLAPALEAFGLEGLFKIKEKQHEGLATFYRRAKFSLLSRHDIALNQALLSDPLHR 442

Query: 136 SFSRAGNRRAVELL----------------VEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                 +   +                    + + KKI V + HL       +       
Sbjct: 443 ELLEKLSPYPLVREKVLQRSSVLQVSILQSTKDSSKKICVANTHLYWHPKGGN------- 495

Query: 180 SCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDF 224
              +   Q         ++T      VP V  GDFN   +               + D  
Sbjct: 496 ---IRLIQVAVALSHIKYVTSDLYPGVPVVFCGDFNSTPSTGTYSFVNSGGIAEDHEDWA 552

Query: 225 WKTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEI 278
               +   ++      K           N        +DY  +         +    +  
Sbjct: 553 SNGEEERCNMALTHPFKLKSACGEPAYTNYVGGFHGCLDYVFIDSDALEVEQVIPLPTHE 612

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304
                         SDH  +  D  +
Sbjct: 613 EVTTHQALPSVSHPSDHIALICDLKW 638


>gi|298373308|ref|ZP_06983297.1| AP endonuclease domain-containing protein [Bacteroidetes oral taxon
           274 str. F0058]
 gi|298274360|gb|EFI15912.1| AP endonuclease domain-containing protein [Bacteroidetes oral taxon
           274 str. F0058]
          Length = 370

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 97/317 (30%), Gaps = 72/317 (22%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
              + + ++     + ++++L+S+NI++L               +  D+     +  ++D
Sbjct: 94  FFTIPYTVITGHKPLDKEIKLLSYNISSLG--------------SVRDFDQFMGFIDSID 139

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           ADIV  QE G Y        K     +  +     +     + +    +A   K+  + +
Sbjct: 140 ADIVCFQEFGYYVHHKDRLKKAMEKNYPYSHIWYKNQ----SRNYSWGVATFSKHPVINK 195

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS------- 178
           +                  ++   ++I    I V++ HL+S  F  +    Y        
Sbjct: 196 KKIEYSS--------RYNVSIYSDIDIGDDTIRVINNHLESNKFTLADIRQYRTLDNDLS 247

Query: 179 ----------------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
                            +  + + QA  ++  I     S    V+ GDFN        + 
Sbjct: 248 GNNILNTSSLFSRKLGEAYKIRATQAAMVRATID---SSPYKSVVCGDFNDVTESYAYSK 304

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                   +     F         + ++    + ID+ ++D                   
Sbjct: 305 I------KDGLTDLFTATAWGYRYSFRSNYMLVGIDHILIDHRLIPL------------- 345

Query: 283 DDIKSRGKRLSDHCPIS 299
             +    K  SDH P+ 
Sbjct: 346 -SLTIDRKNYSDHYPLI 361


>gi|258648241|ref|ZP_05735710.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           tannerae ATCC 51259]
 gi|260852141|gb|EEX72010.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           tannerae ATCC 51259]
          Length = 362

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/349 (12%), Positives = 95/349 (27%), Gaps = 61/349 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVR---------LVSWNINTLSEQEGVSLWKN------ 45
           +I +  +          A +  +++         +  +N+  L + E     K       
Sbjct: 6   IISRRAVLFCLLAFILQAPLRAQLKQVQRSAVYAVAFYNLENLFDTEDDPNNKGDDDFLP 65

Query: 46  ------SVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIF 92
                 + ++       + +   +L  D        + + E+ +   +  +         
Sbjct: 66  NGPYLWTPEKYQQKLHNIARVIGDLARDHCPSGPAFIGVSEIENARVLQDLCNTEP---V 122

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
            S      H     +  I   +    +  ++  ++ P    K        R  + +   +
Sbjct: 123 RSMGLKYIHFDSPDHRGIDVGLLYNPRLFKI-VRAVPYAYVKPDQPNFKTRDELVVSGIL 181

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
            G+ + V+  H  S       +   + +  L    A+ + D I Q  +     +I GD N
Sbjct: 182 GGEPVSVIVNHWPSRYGGSKSDPMRAHAALL----AKTITDSIRQ-ADPANKVIIMGDLN 236

Query: 213 RKINYLGNNDDFWKTIDP---------NDSLIRFPKEKDSRCNANKNLRNKIPI--DYFV 261
                                      N +   + +   + C  +        I  D F+
Sbjct: 237 DDPKDASVAKVLGAARTMKSTPVGGLFNATWPLYDRGIGTLCYQDAWNLFDQQIITDNFI 296

Query: 262 MDQNAYKFL-IQESFSEILYNEDDIKSRGKRL-S-----------DHCP 297
            +          E F+       + K +G  L S           DH P
Sbjct: 297 HNAENTLRFWKAEVFNRDYLMIKEGKRKGYPLRSFDNSTWQNGYADHFP 345


>gi|309366995|emb|CAP20464.2| hypothetical protein CBG_23668 [Caenorhabditis briggsae AF16]
          Length = 439

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 86/323 (26%), Gaps = 51/323 (15%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F  +       +++R+V+ N   L +      W             + +Y +N   DIV 
Sbjct: 30  FAALRRNNVAPRQLRIVTLNAWCLPQP-----WPIGSTDRVHRLQKIGEYMRNETYDIVG 84

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ SYN   ++  +              H            +  R   V  L   Y L
Sbjct: 85  LQELWSYNDFVRLSEQ------VKDAYPYFHYFHSGFTGSGVCVFSRHPIVSTLTSRYSL 138

Query: 131 LGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            G      R        + +         ++     HL +       +          + 
Sbjct: 139 NGFAHHIHRGDWFGGKVVGLTEVEIDGDLRVNFYTTHLHA-----EYDRENDLYLPHRTA 193

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------------- 224
           Q+  L  ++          ++ GD N +   LG                           
Sbjct: 194 QSFELAQFVRHTARGADVVIVTGDLNMEPCDLGFRLILSHAKLFDAWRMSHEVETTDGDD 253

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---PIDYFVM-DQNAYKFLIQESFSEILY 280
            + +           ++   C + K LR K     IDY +         L +   +    
Sbjct: 254 GELLKFRGIAKGGTCDRPDNCYSKKALREKDDSKRIDYMLFKSGRCNVKLEECEITL--- 310

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
             + I       SDH  +   + 
Sbjct: 311 --NQIPGEDLNYSDHVGLRARFT 331


>gi|269791683|ref|YP_003316587.1| exodeoxyribonuclease III Xth [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099318|gb|ACZ18305.1| exodeoxyribonuclease III Xth [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 259

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 76/302 (25%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
            ++V++N+N                   +   ++         D++ LQE          
Sbjct: 4   FKVVTFNVN----------------SIKARVPIVEALLDREGPDVLCLQETKTVDREFPR 47

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++F    + +     +  N        +   + A            +P     D +   G
Sbjct: 48  EIFEARGYRVLVRGMKAYNGVAAAIRGEEQDSFA-----------GFPSGEEMDPYRLLG 96

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R             +W+++ ++     +D  +  Y             L + + + +  
Sbjct: 97  VRL----------DGMWLVNCYVPQGKEIDHPDYAYKLRFLSR------LAELVRELEGD 140

Query: 202 LVPFVIAGDFNRKINYLGN------------NDDFWKTIDP--NDSLIRFPKEKDSRCNA 247
               ++ GD N                    + D  +  +      L+   +        
Sbjct: 141 GE-VLLVGDLNVAPTEADVTNPKNKADHVCFHRDVREAFEGLLGAGLVDVFRRHRPGEGE 199

Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            ID+ +  +      +  +               +R SDH P
Sbjct: 200 FSFWDYRVKGALERNIGWRIDHILATRGLADRSVDSAVLRDY-------RAMERPSDHGP 252

Query: 298 IS 299
           + 
Sbjct: 253 VM 254


>gi|169850286|ref|XP_001831840.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Coprinopsis cinerea
           okayama7#130]
 gi|116507128|gb|EAU90023.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Coprinopsis cinerea
           okayama7#130]
          Length = 609

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 95/342 (27%), Gaps = 84/342 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           +RL++WNIN +        W                   +L++DI+  QEM S   +   
Sbjct: 1   MRLLTWNINGVRTLPQYHPWN--------TLKTFDDILNHLESDIICFQEMKSGRKLLTQ 52

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA---------VRKKNVRVLQQS---- 127
           +V    ++  F+S   +   +S   +      A+          + +    +  +     
Sbjct: 53  EVAVPPSFDSFFSFPIKKTGYSGVATYTRSKVAVPLKAEEGLSGILQPKPPLAPEERISN 112

Query: 128 ---YPLLGAKDSFSRAGNRRAVELLVEINGKKIWV---LDIHLKSFCFLDSLENTYSPSC 181
              YP     D    A + R     ++  G+ I V   L + + ++C  D        + 
Sbjct: 113 YATYPPNLLDDDMHDADDDRLDYKNLDSEGRAIVVDMGLFVLINTYCPNDGTGTEEREAF 172

Query: 182 SLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKIN------------------------ 216
            +     + L+  +    ++     ++ GD N                            
Sbjct: 173 KMDYH--RLLETRVRGLIEKEKREVIVVGDLNACAAVIDHCEGELMIKKGQAMGLEGEEG 230

Query: 217 --YLGNNDDFWKTIDPNDSL----------IRFPKEKDSRCNANKNL----RNKIPIDYF 260
                        +   D            +   +E    C   K           ID+ 
Sbjct: 231 FWGKEYRRWIRDWLVKEDGTGGTLVDITRKLWPDREGMYTCWNTKISARETNYGTRIDFI 290

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++      ++                    + SDHCP+  D+
Sbjct: 291 LVTPGLVPWIKAS-----------DTLPNIKGSDHCPVYADF 321


>gi|194035181|ref|XP_001925325.1| PREDICTED: sphingomyelin phosphodiesterase 2 [Sus scrofa]
 gi|311244316|ref|XP_003121404.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Sus scrofa]
          Length = 423

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 79/302 (26%), Gaps = 42/302 (13%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            + + ++++  +N+N               K        L  +      D+V L+E+ S 
Sbjct: 3   PTFSLRLKI--FNLNC-------WGIPFLSKHRADRVKRLGDFLNMESFDLVLLEEVWSE 53

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LG 132
                +  K               +    +  I + + V  K+       +         
Sbjct: 54  QDFQYLRQKLL--------PTYPAAHYFRSGIIGSGLCVFSKHPIQEFTQHVFTLNGYPY 105

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                     +    L++ ++G  +     HL +               +    QA  L 
Sbjct: 106 MVHHGDWFCGKAVGLLVLHLSGLVLNAYVTHLHA-----EYSRQKDIYLAHRVAQAWELA 160

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNA---N 248
            +I    +     ++ GD N     LG      W  +       R  K  +  C     N
Sbjct: 161 QFIHHTSKKADVVLLCGDLNLHPKDLGCRLLKEWTGLHDAFLETRDFKGSEEGCTMVPEN 220

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +  +          IDY +  +      I      +          G  LSDH  +  
Sbjct: 221 CYVNQRELEQFPVGIRIDYVLY-KAVSGLYISC--KTLKTTTGSDPHSGTPLSDHEALMA 277

Query: 301 DY 302
             
Sbjct: 278 TL 279


>gi|84874692|ref|NP_001033721.1| deoxyribonuclease-1-like 1 precursor [Sus scrofa]
 gi|91206584|sp|Q2QDF0|DNSL1_PIG RecName: Full=Deoxyribonuclease-1-like 1; AltName: Full=DNase X;
           AltName: Full=Deoxyribonuclease I-like 1; Short=DNase
           I-like 1; Flags: Precursor
 gi|73921490|gb|AAZ94275.1| DNase X [Sus scrofa]
          Length = 315

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 69/285 (24%), Gaps = 29/285 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNA 79
           A+  R+ ++N   L+          +          L +       DI  LQE+  S  +
Sbjct: 27  AEAFRICAFNAQRLTL---------AKVAREYVMDTLVRILARC--DITVLQEVVDSTGS 75

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +  +       S       S            A   ++ R    ++ L   +D    
Sbjct: 76  AIPLLLRELNRFDGSGPYSSLSSPLLGRGAYKEKYAYIYRSHRTQVLNFYLYPDED---D 132

Query: 140 AGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              R        +  K +  ++ + L +       E        L   Q           
Sbjct: 133 LFAREPFVGQFSLPSKVLPSLVLVPLHTTPKAVEPELKALYEVFLDVSQRWQ-------- 184

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                  ++ GDFN     L         +           +                I 
Sbjct: 185 ---SEDVILLGDFNADCASLTKKRLDELVLRTQAGFHWAVADGVDTTVRASTHCTYDRI- 240

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +  +     L      +   +    +     +SDH P+ ++  
Sbjct: 241 -VLHGERLQSLLRNAGAFDFPQSFGLTEEEALNISDHYPVEVELS 284


>gi|48477699|ref|YP_023405.1| exodeoxyribonuclease III [Picrophilus torridus DSM 9790]
 gi|48430347|gb|AAT43212.1| exodeoxyribonuclease III [Picrophilus torridus DSM 9790]
          Length = 250

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 80/301 (26%), Gaps = 77/301 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++++SWN+N +                      +  +    + DIV LQE+ S  N + +
Sbjct: 1   MKILSWNVNGIRAAVKNG---------------ILNFINEENPDIVLLQEIKSGKNDLPE 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 + IF +      +          +      K   +   S   +   DS  R   
Sbjct: 46  ELHHMGYKIFINPAEKKGY----------SGTMALSKVEPLDYSSGIGIKDYDSEGRVQI 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                    +     ++++ +  +     +  +      +   +  + L+          
Sbjct: 96  ---------LKYDNFYIINTYFPNSQHGLTRLDYKIDFDNKFLEFCEKLRK--------E 138

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNAN 248
            P +I GDFN     +          +               N   I   +         
Sbjct: 139 KPLIITGDFNVAHEEIDIARPKDNENNAGFTIQERNWMTEFLNHGYIDTYRYFHKEPGHY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++  +  K +                    + SDH P+ 
Sbjct: 199 SWWSYRFNARAKNIGWRIDYFIVTDDFIKNVKDSIIL-----------ENVKGSDHAPLE 247

Query: 300 I 300
           +
Sbjct: 248 L 248


>gi|311259807|ref|XP_001928433.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Sus scrofa]
          Length = 362

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 80/287 (27%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
              ++WNI+ L     +                +  Y      D++FLQE+         
Sbjct: 114 FSFITWNIDGLDLNSLL-----------ERARGVCSYLALYSPDVIFLQEV--------- 153

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +   +         +     TAI ++K  V+   Q                R
Sbjct: 154 --IPPYYTYLKKKASSYEIITGNEEGYFTAIMLKKSRVKFKSQEIIPFPNT-----KMMR 206

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S                    Q + +   + +      
Sbjct: 207 NLLCVHVSVSGNELCLMTSHLEST----------RGHAEERMNQLKMVLKKMQE-APESA 255

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 256 TVIFAGDTNLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYTWDTQMNSNLGIAATCKLRF 315

Query: 258 DYFVMDQNAY-KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A    +I  S   +     +    G+  SDH  +  + D
Sbjct: 316 DRIFFRAAAEGSHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 359


>gi|241841265|ref|XP_002415328.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215509540|gb|EEC18993.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 284

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 92/287 (32%), Gaps = 49/287 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                 ++LVSWNI+ L+++E             +    +      L+ D+VFLQE+   
Sbjct: 28  PGSPTALKLVSWNIDGLNDKE-----------IQARTLSICNALNGLEPDVVFLQEV--- 73

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                        I    ++ ++  +    +D             V   S+ ++    + 
Sbjct: 74  ----------VPSIVGVVKKHLSRYRYIPGDDKGYFAVTLINKNSVKYISHSVVPFTSTQ 123

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  V +    NG  + +++ HL+S        ++   S  L     + +K+    
Sbjct: 124 MD---RHIVCVEATFNGFPLVLMNTHLESMA-----YSSQVRSIQLRKCFRKCMKE---- 171

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----- 252
              S    +  GD N + + + +       +                 + + N       
Sbjct: 172 --PSDRTVIFGGDLNLRDSEVASVGGVPDGMFDVWEACGSSPATRHTWDMSVNDNLDFGG 229

Query: 253 ----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                K   D   +  +    L+  SF  +L  ++ ++  G   SDH
Sbjct: 230 EQAKPKCRFDRVYVRPSQPPGLVPASF--LLTGKERLRPGGCFPSDH 274


>gi|74007458|ref|XP_548620.2| PREDICTED: similar to apurinic/apyrimidinic endonuclease 2 [Canis
           familiaris]
          Length = 487

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 75/313 (23%), Gaps = 63/313 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VSWNIN +       +++            + +    LDADIV LQE    +     
Sbjct: 2   LRVVSWNINGIRSPLQGMVYEEPSNCAAM---AMGRILDKLDADIVCLQETKVTS----- 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                             S   + ++               +        +   ++   R
Sbjct: 54  VATFCKDSATPMAAEEGLSGLLATHNGDVGCYGNMDEFTQEELRALDSEGRALLTQHKIR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  E   K + +++++                    LL  +A+ L         + 
Sbjct: 114 -----TWEGKQKTLTLINVYCPHADAGKPERLTFKMRFYRLLQIRAEALLA-------AG 161

Query: 203 VPFVIAGDFNRKI--------------NYLGNNDDFWKTIDPND---------SLIRFPK 239
              +I GD N                             +              +  +  
Sbjct: 162 SHVIILGDLNTAHCPIDHWDAVNLECFEEDPGRKWMDGLLSNLGCQAGSHVRPFIDSYRC 221

Query: 240 EKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            +  +  A                  +DY + D+             I   +D       
Sbjct: 222 FQPKQEGAFTCWSAVSGARHLNYGSRLDYVLGDRTL----------VIDTFQDSFLLPEV 271

Query: 291 RLSDHCPISIDYD 303
             SDHCP+     
Sbjct: 272 MGSDHCPVGAVLS 284


>gi|251781878|ref|YP_002996180.1| putative 3'-exo-deoxyribonuclease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242390507|dbj|BAH80966.1| putative 3'-exo-deoxyribonuclease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|323126691|gb|ADX23988.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 275

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               T   ++     +  S  +     +       KN      ++P +GA  +    G  
Sbjct: 55  KHIETLLSYFPDYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +V  ++  +                  +     L        ++  
Sbjct: 114 -----MITLEFENFFVTQVYTPNAGDGLRRLEDRQIWDQKYADYLVEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPGSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRLVDKINRSEMISSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            +D D
Sbjct: 270 LLDID 274


>gi|118395482|ref|XP_001030090.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89284379|gb|EAR82427.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 325

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 83/277 (29%), Gaps = 25/277 (9%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + +++WN+N               K        + Q   +++ +IV  QE+   +A+ +
Sbjct: 60  DISILTWNLN------------KIEKTQQKHIERICQLIVDINVNIVCFQEVKDADALTQ 107

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  K              +             A   K      ++               
Sbjct: 108 MKQKLNKNNQVDEIWDCQYEVTGPGYQGPEITACLYKKKLFKLKAVLY----GKQDFEFT 163

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R+   L  E + +   V + HLK      S         S L   ++ L+    ++    
Sbjct: 164 RKPQILYFEKDDRIFTVCNFHLKDGSSGKSSLEKLEKEISSLRPFSESLQK--DKQDGDP 221

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              ++ GDFN+ ++         K       +     +K     +N+N +     D  V 
Sbjct: 222 FLILLVGDFNKNLSIAKEGCFDNKRTVLGTPVDCTMSQK---SKSNQNSKYDQIYDQIVA 278

Query: 263 DQNAYKFLIQESFSEILYNEDDI-KSRGKRLSDHCPI 298
                    +    +I  +E  +    G  +SDH  I
Sbjct: 279 ---ILDKPKEIKLQQIQIDESSMKLMNGHYISDHLAI 312


>gi|86358327|ref|YP_470219.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CFN 42]
 gi|86282429|gb|ABC91492.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CFN 42]
          Length = 369

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/366 (13%), Positives = 103/366 (28%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YTLL--RQYAKNLD----- 65
            +RL ++N+  L  +   + ++N +++              Y  L   +     D     
Sbjct: 2   SLRLATFNVENLLTRFDFTGFRNQLRQDRVIKLFEVNSEGVYQQLEQARVIAAADDTRQM 61

Query: 66  ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                    ADI+ LQE+ +  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  TALAIADADADILCLQEIDNMAALQAFEYGYLFRMVGNGYRQKFLVEGNDSRGIDVAVLM 121

Query: 117 RK------KNVRVLQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKI 157
           R+      K      +S+ +   +D                +   R  +EL + I G+ +
Sbjct: 122 REETRDGQKIEVKDIRSHAMKTYRDFDLFDEDLALTNRIDDKIFKRDCLELDLLIGGRPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFNR 213
            +  +H KS        +    +  L   +A+ ++  I  +  +       F I GD N 
Sbjct: 182 SLYVVHFKSMGNPRDGLDGRQSTLPLRRAEARAVRRIIEDRFGAGRTAKKSFAICGDMND 241

Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255
                             +                +     + +        + R     
Sbjct: 242 YQERVDVVGRRGAGYRFEHQPEAESALDVFSHDGFAENVVVRRQPLDRWTLYHARGPQEQ 301

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCP 297
               +DY  +               I               +           + SDHCP
Sbjct: 302 HLCQLDYIWLSPALAAHNSGRVPEIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 VVMTLD 367


>gi|312081654|ref|XP_003143118.1| endonuclease/Exonuclease/phosphatase [Loa loa]
 gi|307761718|gb|EFO20952.1| endonuclease/Exonuclease/phosphatase [Loa loa]
          Length = 620

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/341 (12%), Positives = 91/341 (26%), Gaps = 61/341 (17%)

Query: 25  RLVSWNIN---TLS-----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           R++S+NI     L      E           +     Y +L +      ADIVFLQE+  
Sbjct: 279 RVISYNILANLYLDLKLKQEDLHFPYCAKEYQNYDYRYPILLREIPGYRADIVFLQEVDE 338

Query: 77  YNAVA---KVFPKNTWCIFYSTERLINHSKRD------------SNNDIHTAIAVRKKNV 121
              +    +V   + +  ++  + +  +                S+N     +   +   
Sbjct: 339 RLWLRFLPEVMSSHGYDCYFKKKGMKVNEGLVVCFRRNQFRCLESHNMWLPDLLNTETYP 398

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI------WVLDIHLKSFCFLDSLEN 175
             +     L  + +  +   ++ AV  ++ ++   +       +L  +   +        
Sbjct: 399 ENVDIIELLKSSDELNAMFISKPAVIQVLVLDNSSLFAEGNGILLLANTHLYFDPRFEII 458

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------- 221
               +        +   D+      + +  + AGDFN   +    +              
Sbjct: 459 KILQALLCARWVVRVATDYANHNPRAKLHILFAGDFNSTPDGPVYHLLSTGNISIKSECC 518

Query: 222 ------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
                               F   +       +F           +    +  +DY    
Sbjct: 519 SYSQHPHGDVNFTIQPSFSSFSLKLTSLGDETQFTNYTRHYRYDGQIAGFEGCLDYIWGS 578

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            N     +     + L  +          SDH P+  D  F
Sbjct: 579 TNVKVHKVIPVPPKELAKKYVALPSKISPSDHLPLVCDIQF 619


>gi|289671111|ref|ZP_06492186.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 266

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 85/313 (27%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +                +    DAD++ +QE  +     ++
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQETKAQE--HQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +         +  S    ++ +A+  ++     ++       D   R    
Sbjct: 44  AGPD-----FLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  +           Q  +WL+  + +   S  
Sbjct: 96  ------IEARFGNLSVVSFYIPSGSSGELRQGYK-------FQVMEWLRPILDEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN-----------------DSLIRFPKEKDSRCN 246
            +V+ GD+N     L   +      +                   +              
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADVPEDANAAEGRGWVDSY 202

Query: 247 A--------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       L   S             R 
Sbjct: 203 RVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPGLRDTLKACSI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 ERFSDHAPYIVDY 264


>gi|319938670|ref|ZP_08013034.1| RgfB protein [Streptococcus anginosus 1_2_62CV]
 gi|319811720|gb|EFW07986.1| RgfB protein [Streptococcus anginosus 1_2_62CV]
          Length = 271

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 70/281 (24%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
                 L +       D++ LQE+       +V     +                     
Sbjct: 18  EKKLDQLAERILQEKYDVICLQEVNQGMESEQVVQAPFYHAVDGAIAIHKDHFACCLVEK 77

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+         +   L+   +  +    R+ +  
Sbjct: 78  LAKRGLIYHWSWAYNHIGFDRFHEGVAILSLKPLKPSE--LLVSDANDPTDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E++G+ + V   HL  +                   Q +       +  +  +P V+ 
Sbjct: 136 ETEVDGRLVTVTSCHLSWWDKG----------FQEEWGQVE------KELLQRDMPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYFVMD 263
           GDFN  + Y G        +   DS             +         ++ + IDY    
Sbjct: 180 GDFNNPVGYEGYQYILKSPLALQDSHAVAATVVGTATVEGDIAGWVGNKDALKIDYIFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ++         F                +SDH  +  +  F
Sbjct: 240 KDFNVKKSAVVFDGKATPV---------VSDHFGLEAEVAF 271


>gi|325298486|ref|YP_004258403.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
 gi|324318039|gb|ADY35930.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
          Length = 339

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 80/317 (25%), Gaps = 54/317 (17%)

Query: 26  LVSWNINTLSE-------QEGVSLWKNSVKR----TTSDYTLLRQYAKNLDAD------- 67
           +  +N+  L +        +   L     K       S    +      L  D       
Sbjct: 30  VAFYNLENLFDTVHDEGKNDYEYLPDGRNKWDDKKYQSKLEHMSTVLSLLATDKVPQGAA 89

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ + E+ +   +  +  +            I H +      I  A+    +  +V    
Sbjct: 90  VIGMAEVENRRVLEDLLAQP---ALKERGYQIIHYEGPDERGIDCAMFYNPELYQVKSTR 146

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                  +   R   R  +    E+ G+++  +  H  S           SP+      Q
Sbjct: 147 LVPYQLAEPSDR-PTRGFLIADGELAGERVAFIVNHWPSR-------GAKSPARERAGVQ 198

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLIRFPKEKD 242
            + LKD + Q+ +S +  VI GD N         +        K +   +    +    +
Sbjct: 199 VRALKDSL-QRLDSKIKIVIMGDMNDDPMDKSMAESLGAKRNAKDVKKKELYNPWWNTLE 257

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKF------LIQESFSEILYNEDDIKSRGKRL---- 292
                 K        D  V   N                 +  Y                
Sbjct: 258 GGDGTLKYRGKWNLFDQIVFTGNFLNRRHRKLTYESHQIFKRDYLFQTEGKYAGYPNRTQ 317

Query: 293 ---------SDHCPISI 300
                    SDH P  +
Sbjct: 318 AGGRWLNGYSDHLPTVV 334


>gi|311269040|ref|XP_001926497.2| PREDICTED: 2',5'-phosphodiesterase 12-like [Sus scrofa]
          Length = 609

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/315 (11%), Positives = 79/315 (25%), Gaps = 35/315 (11%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+N+          S                    L+++     +AD++ LQE+  
Sbjct: 295 IRTVSYNLLADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 354

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LLGAKD 135
                 + P           R+  H    +     +  ++  ++     ++       K+
Sbjct: 355 DVFTDSLVPALEAFGLEGVFRIKQHEGLATFYR-KSKFSLLSQHDIAFHEALQSDPLHKE 413

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLLSQQAQ- 189
              +     A +  V      + V  +          C  ++    +     +   Q   
Sbjct: 414 LLEKLVLYPAAQEKVLQRSSVLQVSVLQSTKDSSKKICVANTHLYWHPKGGYIRLIQMAV 473

Query: 190 --WLKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLI 235
                  ++      +P V  GDFN   +               + D      +   ++ 
Sbjct: 474 ALAHIRHVSCDLYPGIPVVFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEERCNMS 533

Query: 236 RFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRG 289
                K           N        +DY  +D        +    S             
Sbjct: 534 LTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSV 593

Query: 290 KRLSDHCPISIDYDF 304
              SDH  +  D  +
Sbjct: 594 SHPSDHIALVCDLKW 608


>gi|289666316|ref|ZP_06487897.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 266

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 84/313 (26%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +                +    DAD++ +QE  +     ++
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQETKAQE--HQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +         +  S    ++ +A+  +      ++       D   R    
Sbjct: 44  AGPD-----FLPTGYKAWFRDASTKKGYSGVAIYSRYEPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  +           Q  +WL+  + +   S  
Sbjct: 96  ------IEARFGNLSVVSFYIPSGSSGELRQGYK-------FQVMEWLRPILDEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN-----------------DSLIRFPKEKDSRCN 246
            +V+ GD+N     L   +      +                   +              
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADVPEDANAAEGRGWVDSY 202

Query: 247 A--------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       L   S             R 
Sbjct: 203 RVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPGLRDTLKACSI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 ERFSDHAPYIVDY 264


>gi|145297914|ref|YP_001140755.1| extracellular nuclease [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850686|gb|ABO89007.1| predicted extracellular nuclease [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 710

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/381 (10%), Positives = 91/381 (23%), Gaps = 97/381 (25%)

Query: 16  CTASVAQ--KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYT----------------- 55
              + A    +R+ S+N+ N  +    V    N + +  +D                   
Sbjct: 303 SAPARADGTNLRIGSFNVLNYFTSHSSVGGALNVLCKDQADADSAKGCNRGAKNLEDFQK 362

Query: 56  ---LLRQYAKNLDADIVFLQEMGSYNA--------------VAKVFPKNTWCIFYSTERL 98
               +      +DAD++ L EM +                   +      +      +  
Sbjct: 363 QRAKIVNAITEMDADLLGLMEMENNGFDSHSAISDLVQSLNAQQKEADKQYAFVALPKAR 422

Query: 99  INHSKRDSNNDIHTAIAVRK---------KNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
           +   +    + I  A+  R            + +  Q Y      +  +   +       
Sbjct: 423 LGDERFFGGDAIMVAMIYRPAKLTPQGDASVITLPVQKYQDAKGVEKQASQRDSLVQSFT 482

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-------SLLSQQAQWLKDWITQKKESL 202
           VE + + + ++  HLKS                            A+ L + +       
Sbjct: 483 VEGSKEPLTLVVNHLKSKGSGCLENLDGKEPADLQGKCTEFRVSAAKVLGEAVNTLPG-- 540

Query: 203 VPFVIAGDFNRKINYLGNNDDFW----------------------------KTIDPNDSL 234
              ++ GD N                                         +       +
Sbjct: 541 -MVMLVGDLNSYAREDAIRVLTDYVPTEGQRKIVSASRTFLGEQVYEQTGSEVSKSYGLI 599

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291
               +    +  +         +DY + +      ++  +   I   E  +   G+    
Sbjct: 600 DMNVRFNKEKAISYSYEAELGTLDYALANPALASKVVAVADWHINSFESSLFEYGRGFTG 659

Query: 292 ----------LSDHCPISIDY 302
                      SDH PI +D 
Sbjct: 660 DMIKSDNPFSASDHDPIIVDL 680


>gi|117928188|ref|YP_872739.1| endonuclease/exonuclease/phosphatase [Acidothermus cellulolyticus
           11B]
 gi|117648651|gb|ABK52753.1| Endonuclease/exonuclease/phosphatase [Acidothermus cellulolyticus
           11B]
          Length = 249

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 79/276 (28%), Gaps = 57/276 (20%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++S+N+ +L +                D + + +  + +  DI F+QE   +       
Sbjct: 15  RVLSYNVRSLRD----------------DRSAVVEVIRTVRPDIAFVQEAPRFFRWRTRC 58

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +              +      +     +    +      +   L            R 
Sbjct: 59  AQLAADAGM-------YVVTGGRSAGDVLLLAALRVTIRWARDVRLSHQPGLHR----RG 107

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                VE+ G++  V  IHL                   L   A+ L   + +  E + P
Sbjct: 108 VALAGVELAGRRAVVASIHL------------GLEPAQRLRHVAELLA--VPEIAEGVDP 153

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            +IAGD N + +         +  D          E           + +  ID   +D 
Sbjct: 154 VIIAGDVNEEPSGPAWRRLAERYRDAYGVAPAGRGET------YSARQPRTRIDGIFVDP 207

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                     F  I     D+ +  +R SDH P+  
Sbjct: 208 R---------FQVIRCEVPDLPAV-RRASDHLPVLA 233


>gi|302532194|ref|ZP_07284536.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302441089|gb|EFL12905.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 300

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 82/316 (25%), Gaps = 73/316 (23%)

Query: 9   LVFFLVPCTA----SVAQKV-----------RLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           LV  L P T      +A+ +           R+ +WN+       G  L           
Sbjct: 35  LVLILGPSTPGRGLPLARPLPAGAPEEAVPGRVGTWNLCN---PCGSGLNFGR------- 84

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNA------VAKVFPKNTWCIFYSTERLINHSKRDSN 107
                         ++ LQE  + +       + +V+       + S  R  N       
Sbjct: 85  ----ATEIATYAPQVIGLQEACARDVEEIRTYLEEVYGLVYRVAYGSVLRNWNRCGGLPW 140

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                  A+        + S            + +R  + +   + G+ + V + HL   
Sbjct: 141 RPGGFGQAILSAAPMTDRVSVEYPDGG-----SEDRGYLAVTTLVAGRPVRVFNTHL--- 192

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                          + + Q   L   + ++  +    ++ GDFN   +        W  
Sbjct: 193 --------AQRRQEEVRAGQVGVLAAEVARQDRA----IVLGDFNAAPHAPELG-PMWAL 239

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
               D   R P      C A  +       DY  +       +   +             
Sbjct: 240 ATDTDPGCRPPAAGAGACAATTDWN--SKFDYVFLRG-----ITPRTHRVHPSP------ 286

Query: 288 RGKRLSDHCPISIDYD 303
                SDH  +  D D
Sbjct: 287 ----YSDHHLLHTDLD 298


>gi|153941384|ref|YP_001390946.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum F str. Langeland]
 gi|152937280|gb|ABS42778.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum F str. Langeland]
 gi|295319008|gb|ADF99385.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum F str. 230613]
          Length = 263

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 86/297 (28%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N +               ++       L +     + D++ LQE+        +
Sbjct: 1   MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49

Query: 84  FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           F       F             +  +++        +     +A+  K+    + S+ + 
Sbjct: 50  FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKDSFYIS 109

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +KD       R+ ++  +    K I V   HL  +                   QA  L
Sbjct: 110 KSKDKNFWKA-RKIIKCKIFYKNKPILVYSCHLGWWG----------DKEEDFKFQANKL 158

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + + Q        ++ GDFN          D+    +  D       + +         
Sbjct: 159 IEDLKQ----DETCILMGDFNNDAFLNNKGYDYIINNNFKDIYHLAKSKDNGVTVIGDID 214

Query: 252 RNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K     + +D  + ++N      +  F+ I             +SDH  +    +
Sbjct: 215 GWKGNTKNMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262


>gi|321477228|gb|EFX88187.1| hypothetical protein DAPPUDRAFT_305561 [Daphnia pulex]
          Length = 476

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 77/313 (24%), Gaps = 67/313 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
             +V+WNIN +   +                  L+    +L ADI+ LQE      +   
Sbjct: 2   FNIVTWNINGIRSSQ----------------QNLKDLFDSLGADIICLQETKITRDMLDE 45

Query: 81  -AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +    +    +S +R           + ++     +            +   D+   
Sbjct: 46  STALVDGYSSFYSFSRKRSGYSGVATYCKNSYSPFQAEEGLAGTFNVHDDKIDFYDNVHS 105

Query: 140 AGNRRAVEL---------LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           +     +            +    K+   + + + +    ++ EN          +  + 
Sbjct: 106 SFTDEGLRALDAEGRCVMTLHKFKKEETSISLVVINVYCPNAGENDER--LPYKLEFYRA 163

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY--------------LGNNDDFWKTIDPNDS--- 233
           L              ++ GD N                     +       +        
Sbjct: 164 LNLRCHDFLSQGYYVIVLGDMNVSHRLIDHCEPEDVSSFPKSPSRLWLDGFLHEGGGKFV 223

Query: 234 ----LIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                +   KEK   C   K           IDY ++       L        +Y     
Sbjct: 224 DSFRHLYPTKEKAFTCWNTKLSARVNNYGTRIDYILLSNQLTDALQDCIIMSDVY----- 278

Query: 286 KSRGKRLSDHCPI 298
                  SDHCP+
Sbjct: 279 ------GSDHCPV 285


>gi|153832651|ref|ZP_01985318.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01]
 gi|148871217|gb|EDL70095.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01]
          Length = 451

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 79/284 (27%), Gaps = 32/284 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+  +                 +   ++         D++ LQE  S       
Sbjct: 183 LQVATYNLWMIPSVSSDIA---------ARAAMMEHNLSGY--DVLALQEAFSSYREPMF 231

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    + +          DSN      +    +   +   +        +   A  +
Sbjct: 232 DALSDEYPYRTDV-----VGGDSNAMYDGGVVTLSRYPILESDALVFDHCSGTDCYAD-K 285

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V   ++ NG+   + + HL SF   ++          L +         +T++  +  
Sbjct: 286 GIVYTKIDKNGEIYHIFNTHLASFDTREAKRLRRLQLGLLRTF-------MLTKQIPADE 338

Query: 204 PFVIAGDFNRKINYLG-NNDDFWKTID-------PNDSLIRFPKEKDSRCNANKNLRNKI 255
             + AGDFN   N           T++               PK                
Sbjct: 339 AVIYAGDFNIDKNSDFMEYLLMLATLEVDPPAYLGYTPATFEPKINAYASANYSGGEKSE 398

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            +DY ++     +     +  ++     +       LSDH  + 
Sbjct: 399 YLDYVLVSSEHRRAFENTNTVKLRQRVTEDTWGEWHLSDHFSVV 442


>gi|141447778|gb|ABO87600.1| DNA lyase [Coccidioides immitis]
          Length = 606

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/335 (10%), Positives = 74/335 (22%), Gaps = 78/335 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
            +RL +WN+N +           +       +  +    +    DI+  QE  +   +  
Sbjct: 2   PLRLTTWNVNGIRNPFSYPPRAENKS-----FERMFDILEG---DIIVFQETKIQKRDLR 53

Query: 81  AKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR-------------KKNVRVLQQ 126
             +     W  F+S       +S             +R                      
Sbjct: 54  DDMVLIPGWDCFFSLPRHKKGYSGVVIYTRCSACSPIRAEEGLTGTLSSPGSPLPYRELP 113

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
               +G   +  +        + ++  G+ + +L+        +    N         + 
Sbjct: 114 EDDQIGGYPTPEQLELLPIDPVTIDSEGRCV-ILEFPAFVLLGVYCPANRDETRDVFRAA 172

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------YLGNNDDF 224
               L   +          V+ GD N                             +   F
Sbjct: 173 FLNVLDMRVRNLTAMGKRVVLMGDMNISREVIDSAHIIEAIRKGKTTETEFLSSPSRRLF 232

Query: 225 WKTIDPND-----------SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQ 264
            + +                L    K    R                     IDY +   
Sbjct: 233 NQLVGGGGARAKDSEDTPVLLDVCRKFHPDRLGMYTCWEQRVNARPGNYGARIDYVLCSV 292

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +   +  + +              G   SDHCP+ 
Sbjct: 293 DMEDWFTESNIQ-----------EGLMGSDHCPVY 316


>gi|187922338|ref|YP_001893980.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
 gi|187713532|gb|ACD14756.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
          Length = 259

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 76/304 (25%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +     AD++ +QE+         
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWFGEQKADVLCVQEIKCSQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      + +         A    +     +      +G          R
Sbjct: 43  ---DMTPEFMAPHNFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE+   K+ V+ +++ S    D  +                L            
Sbjct: 95  Y-----VELRFGKLSVISVYVPSGSSGDERQQAKYRFMDEFMPHLAELSQ--------ER 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R    
Sbjct: 142 EVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          +               R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIASKAKRTDV-----------FRDIKFSDHAPLT 250

Query: 300 IDYD 303
           +DYD
Sbjct: 251 VDYD 254


>gi|260072724|gb|ACX30620.1| exonuclease III [uncultured bacterium ARCTIC96BD-19]
          Length = 254

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 86/303 (28%), Gaps = 75/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +   E    +                + K  +AD+V LQE+    A    
Sbjct: 1   MRIITINVNGIRAAERKGFF---------------NWLKKQNADVVCLQEI---KAQEDQ 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  + +   T       K  S   ++              +   +  +      +  R
Sbjct: 43  LDERFYPLEMFTYYHSAERKGYSGTGLYCK-----------SKPDKISYSPWEDMNSEGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ +   + VL I+L S                 +          + + ++   
Sbjct: 92  I-----IQADFGDLSVLSIYLPSGSS------KEERQALKMEFIYDRFLPHLRELQKDNR 140

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            +VI GD+N                   +L     +   +      I   +E ++     
Sbjct: 141 RYVICGDWNIAHKKIDLKNWRSNQKNSGFLPEERAWLDILYDEVGYIDSFREINNEEFQY 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           +DY V+  N                      + +R SDH P+ 
Sbjct: 201 TWWSNRGQAWLNNTGWRLDYHVVSSNMAGTATSCEI-----------YKAERFSDHSPLI 249

Query: 300 IDY 302
           IDY
Sbjct: 250 IDY 252


>gi|171692469|ref|XP_001911159.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946183|emb|CAP72984.1| unnamed protein product [Podospora anserina S mat+]
          Length = 709

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/363 (11%), Positives = 94/363 (25%), Gaps = 77/363 (21%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            AS  ++V +++WNI     + ++       S         L+     + + DIV LQE+
Sbjct: 324 VASSLERVSVLTWNILCERYATKQMYGYTPPSALEWDYRKQLILDEIYDRNPDIVCLQEI 383

Query: 75  GSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                  +  P      +    +S  ++              A   +     VLQ+    
Sbjct: 384 SRNAYENEFSPSLAKHGYRGIQWSRPKVKTLPNNMVGGVDGCATFWKTDKWIVLQKEMLD 443

Query: 131 LGA-----------KDSFSRAGNR----RAVELLVEINGKKIWVLDIHLKS--------- 166
                          D ++RA  +      + L   + G ++ V + HL           
Sbjct: 444 YSHLTITRPDLKQNHDVYNRAMGKDNIGTIILLESRVTGSRLIVANTHLAWEPDLCDVKL 503

Query: 167 ----------------FCFLDSLENTYSPSCSLLSQQAQWLKDWI------TQKKESLVP 204
                           +     +      +   + ++ +  ++          +  + +P
Sbjct: 504 LQIACLMENITRLGDKWTRTPPMAIDKKQAIQGILEEGEERQELPPPGPSQEYRNNTDIP 563

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------------------------FPKE 240
            +I GD+N   +    +      +  +                                 
Sbjct: 564 LIICGDYNSTPSSGVYDFLATGRLSHDHPEWLGRKYGNFTRDGVEHPFSIRSAYAHLRGG 623

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD-IKSRGKRLSDHCPIS 299
                  N     +  IDY     N  + +   +  +                SDH  I 
Sbjct: 624 PHELSFTNYTPTFREVIDYIWYSTNTLELVSLLAPPDKQALTRIPGFPYYHFPSDHIQIM 683

Query: 300 IDY 302
            +Y
Sbjct: 684 AEY 686


>gi|183179517|ref|ZP_02957728.1| exodeoxyribonuclease III [Vibrio cholerae MZO-3]
 gi|183012928|gb|EDT88228.1| exodeoxyribonuclease III [Vibrio cholerae MZO-3]
          Length = 219

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 59/233 (25%), Gaps = 46/233 (19%)

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
            +         H  +A+  K   V      + G          R  +    + NG+K  +
Sbjct: 2   GYQVYFHGQKAHYGVAILCKQTPVEV----IKGFPTDNEEHQKRMIMATFADQNGQKTTI 57

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---- 215
           L+       F       +        Q  + L  ++ + + +    V+ GD N       
Sbjct: 58  LN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLD 112

Query: 216 -----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-- 256
                            ++     ++ +T+     +  F +      +       +    
Sbjct: 113 IGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGF 172

Query: 257 -------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  ID  +      +   +          D       + SDH PI   +
Sbjct: 173 EDNRGLRIDVILATPTLAETCQEAGI-------DYELRAIDKPSDHAPIWATF 218


>gi|170649635|gb|ACB21222.1| deoxyribonuclease I-like 1 precursor (predicted) [Callicebus
           moloch]
          Length = 302

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 76/299 (25%), Gaps = 36/299 (12%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILVN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEM-GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           I  LQE+  S  +   +  +       S       S +   +          ++ +    
Sbjct: 52  ITVLQEVVDSSRSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           S+ +   KD       R        +       + ++ +H         L   Y     +
Sbjct: 112 SFYVYNDKD---DLFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYHVFLEV 168

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                                 ++ GDFN     L         +           + + 
Sbjct: 169 SQHW-------------QTEDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGED 215

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                        I   +  +     L   +  +   +    +     +SDH P+ ++ 
Sbjct: 216 TTVRASTHCAYDRI--VLHGERCRSLLDTAAAFDFPTSFQLTEEEALNISDHYPVEVEL 272


>gi|41053678|ref|NP_957163.1| deoxyribonuclease gamma-like [Danio rerio]
 gi|38649119|gb|AAH63237.1| Zgc:77816 [Danio rerio]
          Length = 282

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 73/290 (25%), Gaps = 39/290 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------Y 77
           +++ S+NI  +           S          L +        IV + E+         
Sbjct: 1   MKIASFNIQRMGP---------SKLSDKKVVKTLIKIFSRYS--IVIVLEVVDKQGKAIN 49

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + ++                +   R    +             +    Y      D  
Sbjct: 50  QFLNELNKTGANKNSPFKMVGSSRLGRTLYKEQFVCFYREADAKLLNTYQYEDNQVGDE- 108

Query: 138 SRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             A +R    L  +      K + ++ +H K       L+  Y     +  +        
Sbjct: 109 -DAFSREPFILRFQCKNTVMKDLVLIPVHTKPKDSQKELDELYDVFVEVRDKW------- 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                      +I GDFN    Y+         I  +        +         N    
Sbjct: 161 ------KTDNVMILGDFNADGAYVSKKKMKAIRIRTDTDFHWLIGDDVDTTVKTTNDNTY 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
             I   V  ++  + ++  S     + E    +  + L  SDH P+ +  
Sbjct: 215 DRI--VVYKEDMLEAVVPRSAKPFNFQEAYKLTEEEALDVSDHYPVEVTL 262


>gi|320163204|gb|EFW40103.1| APEX nuclease [Capsaspora owczarzaki ATCC 30864]
          Length = 429

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/323 (10%), Positives = 80/323 (24%), Gaps = 79/323 (24%)

Query: 7   LALVFFLVPCTASVAQKV--RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           L  + +     A   + +  ++  WN+N L                 +      QY +  
Sbjct: 159 LKTLTYTTSRAAPNGKPINFKIACWNVNGL---------------KNAIKEGCLQYLEYE 203

Query: 65  DADIVFLQEMG-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
             D++ +QE       +        +  ++ + +   ++                K   +
Sbjct: 204 KPDVLCIQETKCGEGEIPADSAVPGYYGYWYSAQKRGYAGTGMY----------SKTQPI 253

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                  +   D+  R         ++       +++  ++ +                 
Sbjct: 254 RVSFGLNVPEHDTEGR---------VITAEFADFYLVTAYVPNSGQKLETLPYRQTWDVA 304

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------ 231
                  L        ++  P V+ GD N   N +   +                     
Sbjct: 305 FRTYLLSL--------DAKKPVVLCGDLNVAHNEIDLKNPKTNKRSAGFTPQEREGFTTI 356

Query: 232 --DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
                +   +      +A      +           +DYFV+ Q   + +        +Y
Sbjct: 357 LGTEFVDSFRVLYPEESAYSFWSYRHNSRALNVGWRLDYFVVSQRFMQSVADSQIRSQVY 416

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
                       SDHCPI +   
Sbjct: 417 -----------GSDHCPIVLHLS 428


>gi|213423707|ref|ZP_03356687.1| hypothetical protein Salmonentericaenterica_40228 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 206

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 63/240 (26%), Gaps = 44/240 (18%)

Query: 71  LQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVL 124
           +QE+   + V  +    +P  T   F +     +  + +     + H   AV  +     
Sbjct: 1   MQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE- 59

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                      S   +  R  +   +      + I V+ +HL                 S
Sbjct: 60  ----HYENRGVSVGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLR-------------ES 102

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
               Q   L  W+        P ++AGDFN      G        ++       F +   
Sbjct: 103 HRQAQLTMLAGWVNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRAHG 155

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       + +D   +                           + LSDH P+S + 
Sbjct: 156 RPARTFPVSMPLLRLDRIYVKNANASS-----------PGALPLRNWRHLSDHAPLSAEI 204


>gi|209550061|ref|YP_002281978.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535817|gb|ACI55752.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 369

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/366 (12%), Positives = 100/366 (27%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YTLL--RQYAKNLD----- 65
            +RL ++N+  L  +   + ++N +++              Y  L   +     D     
Sbjct: 2   SLRLATFNVENLLTRFDFTGFRNQLRQDRVIKLFQVSSEGVYQQLEQARVIAATDDTRQM 61

Query: 66  ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                    ADI+ LQE+ +  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  TALAIADADADILCLQEIDNMAALQAFEYGYLFRMVGNGYRQKYLVEGNDSRGIDVAVLM 121

Query: 117 RK------KNVRVLQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKI 157
           R+      K      +S+ +   +D                +   R  +EL + I G+  
Sbjct: 122 REETRDGQKIELREVRSHAMTTYRDLDLFDEELALTNRIDDKIFKRDCLELDLLIGGRPF 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFNR 213
            +  +H KS        +    +  +   +A+ ++  I  +          F I GD N 
Sbjct: 182 SLYVVHFKSMGNPRDGLDGRQSTMPIRRAEARAVRRIIEDRFGGGHTGKKSFAICGDMND 241

Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255
                             +                      +          + R     
Sbjct: 242 YQERIDVIGRRGAGYRFEHQDEAESALDVFSHDGFVENVVRRRAALDRWTLYHSRGPQEQ 301

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCP 297
               +DY  +  +            I               +           + SDHCP
Sbjct: 302 WLCQLDYLWLSPDLAAHNAGRLPEIIRSGQPYRTIFPPGQEVERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 VVMTLD 367


>gi|212550735|ref|YP_002309052.1| hypothetical protein CFPG_378 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548973|dbj|BAG83641.1| conserved hypothetical protein [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 343

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 89/307 (28%), Gaps = 83/307 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80
           + + ++N+                   T     + QY  N ++DI+  QE         +
Sbjct: 92  IHVSTYNLMNFG-------------CCTKHPDSILQYVANQNSDIICFQEFRLGNKQLTL 138

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           + V        ++                    +AV  K   +  ++ P           
Sbjct: 139 SAVRNTLRATPYFFLLPCR--------------VAVFSKYPILSTKNIPFGS-------- 176

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------------- 179
               A+   + ING+K+ +++ HL+S   LDS +  Y                       
Sbjct: 177 RYNGALIAELNINGRKVTLINCHLESNKILDSEKIDYYDLIQTLNVRKLGAFTYMMFHKL 236

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +  + + Q+  + + I   +      +I GDFN                   D    F
Sbjct: 237 TPAFKIRAMQSSIIAEIIR--ESKNPYTIICGDFNDTPISFTYRKI------KGDLEDSF 288

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            +       +         IDY    +N        S++ ++   +D        SDH P
Sbjct: 289 VESGCGMGISFNANYFLFRIDYIFHSKNMR------SYNAMVGKGED--------SDHYP 334

Query: 298 ISIDYDF 304
           +     F
Sbjct: 335 VQTYLQF 341


>gi|90413586|ref|ZP_01221576.1| hypothetical extracellular nuclease [Photobacterium profundum 3TCK]
 gi|90325359|gb|EAS41848.1| hypothetical extracellular nuclease [Photobacterium profundum 3TCK]
          Length = 781

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/381 (12%), Positives = 106/381 (27%), Gaps = 100/381 (26%)

Query: 24  VRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTL------------------LRQYAK 62
           +++ S+N+  L       G  L      +  +D                     +    K
Sbjct: 303 IKVASFNVLNLFTSASEVGGDLNATCSDQADADAAKGCNRGAKTLSEFSLQRTKIVNALK 362

Query: 63  NLDADIVFLQEMGSYN-----AVAKVFPKN---------TWCIFYSTERLINHSKRDSNN 108
            +DADI+ + EM +       A+A +  +           +      +   N  K   ++
Sbjct: 363 AMDADILGIMEMENNGFGTNGALANLVTELNLQFNDSAEHYEYIEIADEDKNQGKYLGSD 422

Query: 109 DIHTAIAVRKKNV--------RVLQQSYPLLGAKDSFS---RAGNRRAVELLVEING--- 154
            I  A+  R   V          + + +      D  +       R ++    +I G   
Sbjct: 423 AIMVALIYRPAKVTPADDAQVIRMPEQHITGNNPDGEAKQLDKYQRDSLMQTFKIVGAKK 482

Query: 155 --KKIWVLDIHLKS---FCFLDSLENTYSPSCSLLSQQAQWLK-----DWITQKKESLVP 204
             + + V+  HLKS    C+ D +   Y    + L       +         + K+    
Sbjct: 483 KSETLSVVVNHLKSKGSGCYEDWVNGEYEDDPADLQGHCNAFRVSGAMTLSQELKKVKGD 542

Query: 205 FVIAGDFNRK--------INYLGNNDDFWKTIDPNDS--------------------LIR 236
            ++ GD N          +          K +  + +                    +  
Sbjct: 543 LLVMGDMNAYGMEDPVRVLTDYKPKKAERKIMSASGTSIAGLPLHATGVEAGKGLGLINL 602

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR----- 291
             +       +         +D+ + +++  K ++      I   E+ +     +     
Sbjct: 603 ASEWHGDDSYSYSYGGELGSLDHALANKSLKKKVVGIEDWHINSVENSLFEYSDKYSGSL 662

Query: 292 --------LSDHCPISIDYDF 304
                    SDH P+ I   +
Sbjct: 663 AKSEGPYSASDHDPVIISLKY 683


>gi|24380027|ref|NP_721982.1| putative exodeoxyribonuclease III [Streptococcus mutans UA159]
 gi|290579994|ref|YP_003484386.1| putative exodeoxyribonuclease III [Streptococcus mutans NN2025]
 gi|13182937|gb|AAK14994.1|AF233280_1 nuclease SmnA [Streptococcus mutans]
 gi|24378017|gb|AAN59288.1|AE014995_5 putative exodeoxyribonuclease III [Streptococcus mutans UA159]
 gi|254996893|dbj|BAH87494.1| putative exodeoxyribonuclease III [Streptococcus mutans NN2025]
          Length = 275

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARALLSR------AVLDTLMEQDADILAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++    ++  S  +     +       K+      +YP +GA  +    G  
Sbjct: 55  KHLRILKDYFPDYDVVWRSSVEPARKGYAGTMFLYKSSLQPTITYPEIGAPATMDDEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +        +         +     L        +   
Sbjct: 114 -----IITLEFDDFFVTQVYTPNAGDGLKRLDDRQIWDEKYAIYLAQL--------DKQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLAHPSSNRRSPGFTDEERAGFTHLLEQGFTDTFRYIHGDVPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       +++    +    +           DH PI
Sbjct: 221 SWWAQRSKTSKINNSGWRIDYWLISNRLSDKILKSEMIDSGTRQ-----------DHTPI 269

Query: 299 SIDYD 303
            +  D
Sbjct: 270 LLKID 274


>gi|298206939|ref|YP_003715118.1| exodeoxyribonuclease [Croceibacter atlanticus HTCC2559]
 gi|83849573|gb|EAP87441.1| exodeoxyribonuclease [Croceibacter atlanticus HTCC2559]
          Length = 254

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 84/303 (27%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+N+N +                 +    L  +    DAD+V LQE+       K 
Sbjct: 1   MKIVSYNVNGIRA---------------AMRKDLISWLSQTDADVVCLQEI-------KA 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P       +            +    ++ +A+  K       ++   G   +      R
Sbjct: 39  NPDQFDETEFHDIGYKYCYWYPAQKKGYSGVALLCKTKP----NHVEYGTGIATMDFEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++L S           S              ++    + S+ 
Sbjct: 95  N-----IRADFNDVSVMSMYLPSGT--------NSARLDFKLNYMDEFLEYSKNLRHSIP 141

Query: 204 PFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCN-------ANK 249
             V+ GD+N        +D         +  ++ +                         
Sbjct: 142 NLVVCGDYNICHKPEDIHDPVRLKNVSGFLPVERDWLTKFIDSGFIDSFRVFNDQPENYT 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DY ++     + L +    +   +           SDHCP+ +
Sbjct: 202 WWSYRANARANNKGWRLDYLMVTPPLQEKLKRSVILKDAVH-----------SDHCPVLL 250

Query: 301 DYD 303
           + D
Sbjct: 251 ELD 253


>gi|149031531|gb|EDL86498.1| similar to putative TRAF and TNF receptor associated protein,
           isoform CRA_c [Rattus norvegicus]
          Length = 366

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 85/290 (29%), Gaps = 50/290 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +  ++WNI+ L                      +         D+VFLQE+      
Sbjct: 117 SSTISFITWNIDGLDGCN-----------LPERARGVCSCLALYSPDVVFLQEV------ 159

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                  ++C +        +    +     TAI ++K  V+   Q              
Sbjct: 160 -----IPSYCAYLRKRARTYNIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNT-----K 209

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  + + V + G +  ++  HL+S               +    Q + +   + +  +
Sbjct: 210 MMRNLLCVNVSLGGNEFCLMTSHLEST----------RKHSAERINQLKTVFQKMQEATD 259

Query: 201 SLVPFVIAGDFNRK-------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           S    + AGD N +            N  D W+ +       R+  +  +  N       
Sbjct: 260 STT-VIFAGDTNLRDQEVIKCGGLPDNVFDAWEFL-GKPKHCRYTWDTKANDNLRIPAAC 317

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           K   D           LI +S   I     +    G+  SDH  +    +
Sbjct: 318 KHRFDRIFFRAE-EGHLIPQSLDLIGL---ERLDCGRFPSDHWGLLCTLN 363


>gi|145234765|ref|XP_001390031.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           niger CBS 513.88]
 gi|134057704|emb|CAK38102.1| unnamed protein product [Aspergillus niger]
          Length = 604

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/344 (13%), Positives = 93/344 (27%), Gaps = 70/344 (20%)

Query: 6   VLALVFFLVPCTASVAQKV---------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           + AL       T + A  +          +  +N++  S Q                   
Sbjct: 270 LTALTKTGSNTTEATATTLQADGTCSSTTIGDYNVDNFSPQSSTMSGIG---------EH 320

Query: 57  LRQYAKNLDADIVFLQEMGSYNA------------VAKVF-----PKNTWCIFYSTERLI 99
           + +Y  +    ++FLQE+   +             ++K+             +   +   
Sbjct: 321 IAKYLNS--PTVLFLQEIQDNSGATDDGVVSANETLSKLASAVKEHGGVAYNYTDIDPEN 378

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQ------------------QSYPLLGAKDSFSRAG 141
           + +  +   +I  A       VR+                       P L    + +   
Sbjct: 379 DTNGGERGGNIRPAYLYDPSVVRLRNYNPGSSTDSTSVLSDGSLSYNPGLIDPSNEAWDD 438

Query: 142 NRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWI 195
           +R+ +    E        + +++H  S     SLE    P           QA+ +  ++
Sbjct: 439 SRKPLVAQWETLDGKNTFYTINVHFTSKYDSTSLEGDPRPPVNGWVENRVDQAKVVAKFV 498

Query: 196 TQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           T   +  S    + AGDFN            + +      L        +        +N
Sbjct: 499 TSILDVNSDAKIITAGDFNEYAFVEPLE--VFVSESKLQDLEEVTGIPATERYTYLYNQN 556

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              +D+  +          E         +   S    LSDH P
Sbjct: 557 CESLDHMYVSSALTSGAKMEHIHV-----NSWVSTDDELSDHDP 595


>gi|320162825|gb|EFW39724.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 284

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 88/297 (29%), Gaps = 38/297 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WNI+ L   +         +   +    L     + DADI+ LQE    +     
Sbjct: 4   LRILTWNISGLDISDASP----PGETIATKLERLAFGMLDHDADILCLQEFPVPSDSRMP 59

Query: 84  FPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             + T+       R +         ++   + I V++  +  L+ +     A  +  +  
Sbjct: 60  AHQKTFESLSKLFRELGWEFVNSAPSHCGWSCILVKQPWLERLELASTAGPAVFATFKVP 119

Query: 142 NRRAVELLVEINGK-----KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              A       +        I V   HL  F    S            S Q Q L   I 
Sbjct: 120 RDDASGFGSSDDNAASSPPTITVASCHLAPFKTGTS----------QRSAQFQALAQAIK 169

Query: 197 QKK---ESLVPFVIAGDFNRKINYLGNN------DDFWK--TIDPNDSLIR-FPKEKDSR 244
             +    +    VIAGDFN + N   +       D F     ++P +     F  +    
Sbjct: 170 ASQSTRSATNSIVIAGDFNARENENEHFAHDGYVDAFSAYCLLNPKERSQLQFTWDSTKN 229

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                        D  V      K     S   I  +          LSDH  +  +
Sbjct: 230 KYHADGFGFTCRFDRIV-----TKRAKVTSLKMIGNSPCVEADSSFYLSDHFGLVAE 281


>gi|171321052|ref|ZP_02910036.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5]
 gi|171093687|gb|EDT38835.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5]
          Length = 257

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 86/307 (28%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +               ++    +AD V +QE  + + +  A
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIKVSADDLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    +    ++       +S     +       +              +G   S   A 
Sbjct: 47  EFVEPHGLRSYFHHAEKKGYSGAGMYSRREPDDVI--------------IGFGSSEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ V+ +++ S    +  +                L        +S
Sbjct: 93  GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAEL--------KS 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N     +   +                +   +  +   +   +  D R  
Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTQLFDDVGYVDVFRTLDPRPE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +          + S             +  + SDH P
Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKRTSI-----------FKDIKFSDHAP 248

Query: 298 ISIDYDF 304
           +++DYD+
Sbjct: 249 LTVDYDY 255


>gi|125624555|ref|YP_001033038.1| 3'-exo-deoxyribonuclease [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493363|emb|CAL98337.1| 3'-exo-deoxyribonuclease [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071349|gb|ADJ60749.1| exodeoxyribonuclease A [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 285

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 84/311 (27%), Gaps = 62/311 (19%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +SWNI++L+          + +R       + +       D++ +QE    +   K  
Sbjct: 4   KFISWNIDSLNA-----ALTGTSERAALSL-AVVKNLAQAQPDVLAIQETKLPSTGPKKA 57

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   +   +++  S  +     ++   V  K                    A  R 
Sbjct: 58  HLEVLEELFKGYKIVWRSSVEPARKGYSGTMVLYKETLPEPVITFPEIDAPEPMDAEGRI 117

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + +     +V  ++  +     +  +               L        ++  P
Sbjct: 118 -----ITLEFPDFFVTTVYTPNAQEGLTRLDLRGIWDDNYRNYLTSL--------DAQKP 164

Query: 205 FVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIR------FPKEKD 242
               GDFN     +                   + F + ++   +           K  +
Sbjct: 165 VFACGDFNAAYTEIDLANPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRQLHGQVEKFYE 224

Query: 243 SRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
              +       +            IDY+++     + +             +    G+RL
Sbjct: 225 EGRSIYTWFAQRAKTSKLNNSGWRIDYWLVSNRLAQAV----------KVSEPLDSGERL 274

Query: 293 SDHCPISIDYD 303
            DH PI ++++
Sbjct: 275 -DHVPILLEFE 284


>gi|116205379|ref|XP_001228500.1| hypothetical protein CHGG_10573 [Chaetomium globosum CBS 148.51]
 gi|88176701|gb|EAQ84169.1| hypothetical protein CHGG_10573 [Chaetomium globosum CBS 148.51]
          Length = 452

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 82/301 (27%), Gaps = 38/301 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + K  ++S N+  L      +          ++   +         D++ +QE  +Y+A 
Sbjct: 25  SGKFNILSMNVAGLPPIFNGNDVPGDKATNAAN---IGTKFAEYGHDVIHVQEDFNYHA- 80

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                 + +       R          + ++T        V   +  +            
Sbjct: 81  ------HIYRTDTHPFRTATSGGVPFGSGLNT--LSNFDWVDFRRVKWDTCSNASGADCL 132

Query: 141 GNRR-----AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             +      AV      N   ++V   +L +    +          +        + ++I
Sbjct: 133 TPKGFTFMRAVVARPADNSTAVYVDFYNLHTDAGGED------DDLAARQHNVNQVAEYI 186

Query: 196 TQKKESLVPFVIAGDFNRKIN---YLGNNDDFWKTIDPNDSLIRFPKEKDSR-------- 244
           ++        V+ GD N + +                    +     E            
Sbjct: 187 SKW-SKGNAVVVHGDTNSRYSRVADTAIRSLLASENAGGPGMADPWIELQRGGVVPTEEV 245

Query: 245 -CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            C+   +      +D      +    L  E+F         ++  G  LSDH P+ +D+ 
Sbjct: 246 LCSNPASDNVCEVVDKVFYRSSPLVTLQAETFRYDSKR--FLQDEGNVLSDHNPVFVDFA 303

Query: 304 F 304
           +
Sbjct: 304 W 304


>gi|326315164|ref|YP_004232836.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372000|gb|ADX44269.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 271

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/277 (10%), Positives = 72/277 (25%), Gaps = 62/277 (22%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +  +      D + +QE+ + +A             + T   +      +    ++ + +
Sbjct: 24  VEAWIAETRPDCICVQEIKAQSA--------DMEGRFETLAGLKGHFHYATKKGYSGVGI 75

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             ++     +        D+  R      VE   +   +K+ ++  +  S       +  
Sbjct: 76  YTRHEPTDVRVGYGSSEFDAEGRY-----VEARFDTPARKLSIISAYFPSGSSGPERQLA 130

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                +               + +    F++ GD N                        
Sbjct: 131 KFRFLAEFHVHL--------MRVKEEREFILCGDVNIAHQQIDLKNWRSNQKNSGFLPEE 182

Query: 221 NDDFWKTIDPNDS----LIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNA 266
            +   K +   D     +  +   +            N+           +DY +     
Sbjct: 183 REWMTKLLHQTDPGGGLVDVYRLLQPDTTETAYTWWSNRGQAYANNVGWRLDYHLATPAI 242

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 ES             + ++ SDH PI++ YD
Sbjct: 243 AALARTESI-----------YKQQKFSDHAPITVGYD 268


>gi|209522354|ref|ZP_03270972.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160]
 gi|209497213|gb|EDZ97450.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160]
          Length = 260

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +     AD++ +QE+         
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWFGEQGADVLCVQEIKCSQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      + +         A    +     +      +G          R
Sbjct: 43  ---DMTPEFMAPHDFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE+   K+ V+ +++ S    D  +                L         +  
Sbjct: 95  Y-----VELRFGKLSVISVYVPSGSSGDDRQQAKFRFMDEFMPHLAELA--------TER 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R    
Sbjct: 142 EVIVCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWLDKLFDEVGYVDVFRTLDPRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          +               R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIASKAKRTDV-----------FRDIKFSDHAPLT 250

Query: 300 IDYD 303
           +DYD
Sbjct: 251 VDYD 254


>gi|74145525|dbj|BAE36189.1| unnamed protein product [Mus musculus]
          Length = 608

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 82/314 (26%), Gaps = 33/314 (10%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 294 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 353

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + P           R+  H    +        +  +             L  + 
Sbjct: 354 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 413

Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQ-- 189
               A N  A E +++ +   +I VL     S    C  ++    +     +   Q +  
Sbjct: 414 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVA 473

Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK------- 241
                 +++     +P +  GDFN   +    +     +I  +        E+       
Sbjct: 474 LVHIRHVSRDLYPGIPVIFGGDFNSTPSTGMYHFVISGSIAEDHEDWASHGEEERCSMPL 533

Query: 242 ----------DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGK 290
                           N        +DY  +D        +    S              
Sbjct: 534 SHCFQLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVS 593

Query: 291 RLSDHCPISIDYDF 304
             SDH  +  D  +
Sbjct: 594 HPSDHIALVCDLKW 607


>gi|71424429|ref|XP_812800.1| RNA-editing complex protein MP100 [Trypanosoma cruzi strain CL
           Brener]
 gi|70877624|gb|EAN90949.1| RNA-editing complex protein MP100, putative [Trypanosoma cruzi]
          Length = 870

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 26/199 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            ++L++WN+         +          +   Y +L +  +  DAD+V +QE+      
Sbjct: 647 TLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVLARVIQQEDADVVGMQEVE----- 701

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +  F S +  +  +   S      +I+     + V ++ +P+         A
Sbjct: 702 ------PVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPA 755

Query: 141 GNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                     + +++    + V   HL +           S   +L     + L      
Sbjct: 756 WTNHVSLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTL------ 809

Query: 198 KKESLVPFVIAGDFNRKIN 216
                   V  GDFN    
Sbjct: 810 ----TGDVVTMGDFNDWPT 824


>gi|328542833|ref|YP_004302942.1| endonuclease/exonuclease/phosphatase family [polymorphum gilvum
           SL003B-26A1]
 gi|326412579|gb|ADZ69642.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum
           SL003B-26A1]
          Length = 362

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 78/286 (27%), Gaps = 48/286 (16%)

Query: 20  VAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            A+++R+VS N     L   +                  L  Y K + AD+V LQE    
Sbjct: 119 AAKRLRVVSINTATLYLGTPD------------------LLDYLKTVAADVVVLQEATWR 160

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + +   +              H       D    + V  +   +  +           
Sbjct: 161 WQLRRWEKREGNRRIAGHGPYFEHFAVGPEGD----VVVFSRYPII-SRRGIDPAVPGVL 215

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
               +R  +++ +++ G+ + ++ IH  S           +          + L + +  
Sbjct: 216 REVAHREFLDIELDVAGRPVRIVAIHPASP--------RGARLWEARQAYYRHLSEALRG 267

Query: 198 KKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               + +P ++ GD+N                         P+      +         P
Sbjct: 268 PAAGTDLPTILIGDWNLSPWSAHFRALLKAGGLKAAFPDTIPQTTRYFADYRLRWLLGAP 327

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D+  +        +                     SDH P+ +D 
Sbjct: 328 VDHVAVSPGLGVDRVGIGPDI--------------GSDHLPLLVDI 359


>gi|191639720|ref|YP_001988886.1| Endonuclease/exonuclease/phosphatase [Lactobacillus casei BL23]
 gi|190714022|emb|CAQ68028.1| Endonuclease/exonuclease/phosphatase [Lactobacillus casei BL23]
 gi|327383835|gb|AEA55311.1| Endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           casei LC2W]
 gi|327387014|gb|AEA58488.1| Endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           casei BD-II]
          Length = 355

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 90/324 (27%), Gaps = 65/324 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            Q    +++NI               G      S K   +    + +  +  + D+ F Q
Sbjct: 52  GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRAYSKKSVRTSINGVIKTTQAQNPDVAFYQ 111

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-----------NDIHTAIAVRKKNV 121
           E+      ++   +         +    + +   +               + I    K  
Sbjct: 112 EIDPDGDRSQHVNEVKMVTGAQQQYANVYGQNYDSAYLFYPFTQPIGKAKSGIITLSKAK 171

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP 179
               + Y L    D        RA         NGK+  +++IH+ +F            
Sbjct: 172 VDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAFTPN--------- 222

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              +   Q   L  +I Q  +     ++AGD+N ++          K +D   + +    
Sbjct: 223 -VKIQQAQFTKLFKYIEQAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPKS 281

Query: 240 EKDSRCN--------------------ANKNLRNKIPID-YFVMDQNAYKFLIQESFSEI 278
           +  +  +                              ID Y +   N    +  ES   +
Sbjct: 282 KLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYIL-SPN----IKAESVHVV 336

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
                     G + SDH P+ + +
Sbjct: 337 ST--------GFQYSDHNPVVLKF 352


>gi|85700212|gb|ABC74556.1| exonuclease III [Rhizobium leguminosarum bv. trifolii TA1]
          Length = 215

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/228 (11%), Positives = 68/228 (29%), Gaps = 40/228 (17%)

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
            +            +A+  K+              D  +    R         + + + V
Sbjct: 3   GYHVETHGQKGFNGVAILSKSTPFEVNRGLPGDPLDEQA----RFLEAAFTLSDTRILRV 58

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--- 216
             I+L +   +++ +  Y  +        + L+ +  ++       V+AGD+N       
Sbjct: 59  CCIYLPNGNPVETEKYPYKLA------WMERLRTFAAERLAYEDMLVLAGDYNVIPEPHD 112

Query: 217 ------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--------NKIP 256
                       +L    + ++ ++            D+    +            N I 
Sbjct: 113 CFDPKVWENDALFLPQTREAFRKLENLGLTDAVRATTDATQFYSFWDYQAGAWPKNNGIR 172

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ID+ ++   A   +   +  + +          ++ SDH P+   +DF
Sbjct: 173 IDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHVPVIAYFDF 213


>gi|315607086|ref|ZP_07882090.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccae ATCC 33574]
 gi|315251140|gb|EFU31125.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccae ATCC 33574]
          Length = 312

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/307 (9%), Positives = 79/307 (25%), Gaps = 46/307 (14%)

Query: 30  NINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLD--------ADIVF 70
           N   L +    SL  ++             R       + +    L          D+V 
Sbjct: 16  NCENLFDTRHDSLKNDTEFLPEGSHHWTRTRYWHKLNDIGREIIALGDDSAGWRLPDVVA 75

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           + E+ + + +  +  ++          + +     S ++    +A+    V     S+  
Sbjct: 76  MCEVENDSVMYDLTKRSLLRKARYEYLMTD-----SPDERGIDVALMYNPVTFRPLSHHA 130

Query: 131 LGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +           R  + +  +      + +  +H  S    +     +          A 
Sbjct: 131 IRIPLLPDMRPTRDILYVAGLAGEADTLHLFVVHAPSRMGGERASRPFRLQVVRRLIAAI 190

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                +          ++AGDFN   +    +  +   I    ++    +  +      +
Sbjct: 191 DSIRLLQ----PDAQIILAGDFNDYADSPALDSLY---IHDMHNVSATARGANGARGTYR 243

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILY--------------NEDDIKSRGKRLSDH 295
                  +D  +   +    L      ++ +                       +  SDH
Sbjct: 244 FRGEWGSLDQIICSLSVAGKLANCHIGDLPFLLEEDEKYGGVHPRRTYLGPKYQRGFSDH 303

Query: 296 CPISIDY 302
            P+   +
Sbjct: 304 LPLVARF 310


>gi|229154133|ref|ZP_04282258.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
 gi|228629413|gb|EEK86115.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
          Length = 263

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  + + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIVTKHNVIKEDTFFISENKDTAYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFGGQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +++      +  
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKVRSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNI---------ISDHFGVEVQVD 262


>gi|223984603|ref|ZP_03634730.1| hypothetical protein HOLDEFILI_02026 [Holdemania filiformis DSM
           12042]
 gi|223963450|gb|EEF67835.1| hypothetical protein HOLDEFILI_02026 [Holdemania filiformis DSM
           12042]
          Length = 363

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 101/335 (30%), Gaps = 77/335 (22%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLW------------KNSVKRTTSDYTLLRQ------YA 61
             Q+  L+++N+   +  +  S +            +    R  S   ++          
Sbjct: 51  ADQEYTLMTYNLGFGAYSDDYSFFMDTGKMKDGKATRGKHGRALSKEAVIANTQGSLALI 110

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKN-------------TWCIFYSTERLINHSKRDSNN 108
           +    D +FLQE+   ++ +    +                  F+S   ++   +   + 
Sbjct: 111 QQSSPDFIFLQEVDVKSSRSYGVDQAAILRSAFSGYGSVFALNFHSPYLIVPPQEPHGSV 170

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSF 167
                          +++ +P+ G+  +     +R  +   +   NGK++ ++++HL ++
Sbjct: 171 QSGLLTLSNWHVDENVRRQFPVDGSFITKFTDLDRCFLISRLGLDNGKELVLINVHLSAY 230

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK--------INYLG 219
               +          + +QQ   L   + Q++E     +  GDFN           +   
Sbjct: 231 DQGGT----------IRAQQLALLNQVLIQEREQGNYVIAGGDFNHDIAGTLDFFPSQQQ 280

Query: 220 NNDDFWKTID------------PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
             D  +                 N       +  D    A      +  +D F++  N  
Sbjct: 281 VPDWIFAMNTADLAEGYHFVRADNADETATCRGADIPFEAGVT--YQAIVDGFLVSDNLA 338

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                           +      R SDH P+ + +
Sbjct: 339 A-------------TAENIQNDYRYSDHNPVVLKF 360


>gi|254372791|ref|ZP_04988280.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570518|gb|EDN36172.1| exodeoxyribonuclease III [Francisella novicida GA99-3549]
          Length = 262

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 90/306 (29%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N N +        W               ++ K  D D + +QE  +       
Sbjct: 2   IKVMTFNANGIRAAARKGFW---------------EWFKTQDVDFLCMQETKAQ------ 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F +    I +         K              KK    + +   L  A D        
Sbjct: 41  FHQLEKDIEHFPTGYYYEFKDAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRY---- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ + +   +  ++L S    D  +           Q  +  K+ + ++ ES  
Sbjct: 97  ------IQFDYENFSIASLYLPSGSSGDVRQ-------EYKMQFLEKYKEILKEQAESGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
            F++ GDFN     +   +                 +   I  +   +   +  + +   
Sbjct: 144 DFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQAWLDHIFDDLGWVDTFRVINHQPLQ 203

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY +        ++ ES         D   R    SDH P+
Sbjct: 204 YTWWSNRGQARANNVGWRIDYHISTPAIKDKVVPES---------DYIYRENWFSDHAPL 254

Query: 299 SIDYDF 304
           +I YDF
Sbjct: 255 TISYDF 260


>gi|52840885|ref|YP_094684.1| exodeoxyribonuclease III [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52627996|gb|AAU26737.1| exodeoxyribonuclease III [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 260

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 86/303 (28%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N N +        +                +    D D V +QE  S   V ++
Sbjct: 1   MKVISFNANGIRSSARNGFY---------------DWLVGQDVDFVCIQETKSQ--VEQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +       R       D+    ++ +A+  K   +        G    +     R
Sbjct: 44  IPEELYF-----PRDYFCDYFDAEKKGYSGVAIYSKYKPMRIVK----GLGFDYCDKEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ +  K+ V+ ++L S    D  +        +     +     +   K    
Sbjct: 95  Y-----IQFDYPKLSVVSLYLPSGTSGDDRQ-------EVKYAFLEQFARHLMNLKNEGR 142

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD+N                   +L     +   +  +   +   +  +      
Sbjct: 143 ELIICGDYNIAHKKIDLKNWRGNQKNSGFLPEERAWMDELFGSMGFVDAFRVHNQEEEQY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY V+                 Y  D    R  R SDH P+ 
Sbjct: 203 TWWSYRARAWEKNVGWRIDYQVITPGL-----------TEYVADSRIFREARFSDHAPLM 251

Query: 300 IDY 302
           I+Y
Sbjct: 252 IEY 254


>gi|320580795|gb|EFW95017.1| Isc1p [Pichia angusta DL-1]
          Length = 416

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 91/314 (28%), Gaps = 56/314 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               ++L+++N+  L           S +R        R+     D D+V LQE+ +   
Sbjct: 6   QGDSIKLLTFNLWGL--------KYVSKQRHERIAAFARKLRSQPDYDVVALQEIWTDED 57

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--QSYPLLGAKDSF 137
              +            +      +  S       +A+  K          +P+ G   +F
Sbjct: 58  WKSIVD-------LCQDVYPYTRRYSSGILTGPGLAILSKVPIKRTFLYRFPVNGTPAAF 110

Query: 138 SRAGNRRAVELLVEI------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            R        + V +          + VL+ H+ +   L       S    + + QA  +
Sbjct: 111 YRGDWYVGKSVAVTLLEPLYEGASPVAVLNSHMHAPYALTG----SSAYACVRACQAWDI 166

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNN--------------------DDFWKTIDPN 231
                   E+    ++ GD N +   L                        D  + + P 
Sbjct: 167 ASVAQTYSEAGYAVILVGDLNSRPGSLPYRIMQSEAGLTDSWEEIHGLTDADKLRQMSPE 226

Query: 232 DSLIRFPKEKDSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
           D +       DS  N  +  R       +DY ++D    + L      +       + S 
Sbjct: 227 DQIKLGGATCDSTLNTWRADRGPDEACRLDYALIDNTRLRALDAS--VQFTEKIPGVGSY 284

Query: 289 GKRLSDHCPISIDY 302
               SDH   S  +
Sbjct: 285 ----SDHFAYSATF 294


>gi|281337761|gb|EFB13345.1| hypothetical protein PANDA_019984 [Ailuropoda melanoleuca]
          Length = 294

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 77/298 (25%), Gaps = 32/298 (10%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           A++  L+P     A+  R+ ++N   L+          S            +       D
Sbjct: 5   AVLLLLLPG---GAEAFRICAFNAQRLTL---------SKAAREHVMDTFVRILARC--D 50

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           I+ LQE+   +  A          F   +   ++S   S +   +    +   +    ++
Sbjct: 51  IMVLQEVVDSSGSALSLLLRELNRF---DGSGSYSFLSSPSLGRSTYMEKYVYIYRSHKT 107

Query: 128 YPLLGAKDSF-SRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLS 185
             L             R           K +  ++ + L +       E        L  
Sbjct: 108 QVLDSYVYEDKDDLFAREPFVAQFTFPSKVLPSLVLVPLHTTPKAVEQELNALYDVFLDV 167

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            Q                  ++ GDFN     L         +           +++   
Sbjct: 168 SQRWQ-----------TKDMILLGDFNADCASLTKKRLGELLLRTQAGFHWVIGDEEDTT 216

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      I   +  +     L   +      +    +     +SDH P+ ++ +
Sbjct: 217 VRASTHCAYDRI--VLHGERCQSRLHSAAAFNFPRSFQLTEEEALNISDHYPVEVELN 272


>gi|295675147|ref|YP_003603671.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
 gi|295434990|gb|ADG14160.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
          Length = 259

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 77/304 (25%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +               ++     AD++ +QE+         
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------EWFGEQGADVLCVQEIKCSQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      + +         A    +     +      +G          R
Sbjct: 43  ---DMTPEFMAPHDFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE+   K+ V+ +++ S    D  +                L            
Sbjct: 95  Y-----VELRFGKLSVVSVYVPSGSSGDERQQAKFRFMDEFMPHLAELAK--------ER 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R    
Sbjct: 142 EVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLDKLFDEVGYVDVFRTLDQRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          +               R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIASKAKRTDV-----------FRDIKFSDHAPLT 250

Query: 300 IDYD 303
           +DYD
Sbjct: 251 VDYD 254


>gi|172041403|ref|YP_001801117.1| exodeoxyribonuclease III [Corynebacterium urealyticum DSM 7109]
 gi|171852707|emb|CAQ05683.1| exodeoxyribonuclease III [Corynebacterium urealyticum DSM 7109]
          Length = 271

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 84/304 (27%), Gaps = 69/304 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ +WNIN                RT  D   +R + +  D D++ LQE         
Sbjct: 13  SMRIATWNIN--------------SVRTRED--RVRAFLERSDVDVLCLQETKCT----- 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAG 141
                     +       + +          +A+  +      Q  +   G     +   
Sbjct: 52  -------DKQFPDFSDTGYEQAHHGLHSFNGVAILSRVGLEDVQTEFGQPGFDKDLNAVQ 104

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           ++ A  +    NG  + V  +++ +   +     +Y  +          L  +     E 
Sbjct: 105 HQEARAIGALCNG--VRVWSLYVPNGREIRDPHYSYKLA------WLDALASYAKTTGED 156

Query: 202 L--VPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSLIR-------FPKEKDSRCNAN 248
                 V+ GDFN         D  W      + PN+             +  +   +  
Sbjct: 157 GTAEKLVLTGDFNIAPRDEDVWDRSWFEGKTHVTPNERKRLTALEDAGLTQATELIADQY 216

Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           ID                 S      D  + +GK  SDH P+ 
Sbjct: 217 TYWDYQAMRFQKNEGIRID----------LQYARGLSPEAGRVDRDERKGKGASDHAPVI 266

Query: 300 IDYD 303
           IDY 
Sbjct: 267 IDYT 270


>gi|269121001|ref|YP_003309178.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
 gi|268614879|gb|ACZ09247.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
          Length = 243

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 85/299 (28%), Gaps = 67/299 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +  L F         A+ ++++++NI       G +               + +  
Sbjct: 1   MKKIITVLFFLTYIL---EAKNLKIMTYNIYGGRLANGTT---------------IGRNI 42

Query: 62  KNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           K  D D + LQE+      +    +       + YS          DS          R 
Sbjct: 43  KKFDPDFISLQEVDYYTKRSNFNDIVKDIAQELNYSYYYFKKSRDYDSGEFGI-GFVSRY 101

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
              ++ +   P +G       A  R+ +   ++       VL I        +       
Sbjct: 102 PIEKIFEYELPSIG-------AEKRQVIAAQIDEKIFSKKVLIIDTHLDYNPN------- 147

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
               +  ++ + L +   +         + GDFN         + + + I   +    F 
Sbjct: 148 ----IKPKEMEALLNITAEF--PGDVKFLTGDFNLLPTT----EYYQQIIKEWNDTYLFD 197

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           +                 IDY   D+     L    F +  Y           LSDH P
Sbjct: 198 EP---------------RIDYIFGDKTNNWNLRSSKFIKDEYL------DWSTLSDHFP 235


>gi|163737199|ref|ZP_02144617.1| hypothetical protein RGBS107_03613 [Phaeobacter gallaeciensis
           BS107]
 gi|161389803|gb|EDQ14154.1| hypothetical protein RGBS107_03613 [Phaeobacter gallaeciensis
           BS107]
          Length = 354

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 88/339 (25%), Gaps = 56/339 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ-- 72
           P  A  A+ +R+ S+N   LS +    L ++  +        + Q     DADI+ LQ  
Sbjct: 18  PAEADPAKTLRIASFNTE-LSRKGPGLLLRDLQRGKDPQVGAILQTLTEADADILVLQGI 76

Query: 73  ----EMGSYNAVAKVFPKNTWCIFYSTERLINHSK-------------------RDSNND 109
               E  S   +  +  K      +      N                            
Sbjct: 77  DWDHEGRSVIELRNLLAKRIPRYGHIYAARPNTGMQTRHDMDGDGRLGTARDAQGYGRFT 136

Query: 110 IHTAIAVRKKNVRVLQQSYPL------------LGAKDSFSRAGNRRAVELL-------- 149
               +A+  +   +  +   L            L    + +   +R A+ +         
Sbjct: 137 GQDGMAILSRLPILRVEVRDLSELLWQDLPGATLPTHPNGTSFPSRDALAVQRLSTTGHW 196

Query: 150 ----VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               +  +G+++ V+        F    +     +   +      L   +      + P+
Sbjct: 197 IVPILLPSGEQLSVMAFQATPPLFDGPEDRNGLRNQDEIRLWQVLLDGGL--GPTPIEPW 254

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPIDYFVMD 263
           VI G  N   +           +  +  L        +      N      + +DY +  
Sbjct: 255 VIVGGANLDPDKGAGRRTAIANLLRDPRLQDPRPPDAAGRTDTVNWGTSGSMRVDYVLPS 314

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +     ++                  +  S H  +  D 
Sbjct: 315 RALQ--VVASGLIWPAEITAKEGGADRPASRHALVWTDL 351


>gi|144897769|emb|CAM74633.1| Metal-dependent hydrolase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 382

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/331 (10%), Positives = 100/331 (30%), Gaps = 62/331 (18%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN------ 78
           RL ++N+ +L ++   +              +LR   + L ADI+ LQE+ ++       
Sbjct: 58  RLATFNLESLDDRLSGADDF------ADRMAVLRPQLQRLRADILCLQEVNAHTIDGKHG 111

Query: 79  -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL--- 130
                 + ++     +  ++   R+I+ ++          + +  +   +          
Sbjct: 112 PREATGLDRLLDGTAYADYH---RVISLNRGGKRPADRHNLVILSRFPLLSHGQVWHDLV 168

Query: 131 -----------LGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYS 178
                           + +   +R  +   V++   + + V+++HL++            
Sbjct: 169 PPPAILPVTARPAPDQAQAVEWDRPILWADVDLGHDRVLHVVNLHLRAPRAAWLAGQKTE 228

Query: 179 P---------------SCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLG-- 219
                           +    + QA   +  + Q  ++       + GDFN         
Sbjct: 229 HGLWLSVGGWAEGFYLAAVKRAGQALEARLVVEQMFDAQGDALVAVCGDFNAGDREAPVR 288

Query: 220 -----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                  D     +     +       +S+  +  +   ++ +D+ ++ +     L    
Sbjct: 289 TLRGDEEDTGNGHLAARMLVPVERSIPESQRFSVVHHGQRVMLDHILVSRPLLGCLAACE 348

Query: 275 FSEILY-NEDDIKSRGKRLSD--HCPISIDY 302
                  +E    +      D  H P+  ++
Sbjct: 349 IHNETLGDELVGPATVWTAPDSFHAPMVAEF 379


>gi|321474661|gb|EFX85626.1| hypothetical protein DAPPUDRAFT_46150 [Daphnia pulex]
          Length = 552

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/350 (10%), Positives = 91/350 (26%), Gaps = 70/350 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      + V +       + +  ++  ADI+ LQE+ +     
Sbjct: 186 FTVMCYNVLCDKYATRQMYGYCPSWVLKWEYRRKSILEEIRHYSADIISLQEVETEQFYN 245

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
              P+     +       + +K  + +D       AI  R     ++             
Sbjct: 246 YFLPELKRDGYDGIFSPKSRAKTMAESDRRYVDGCAIFYRTAKFSLVYDHLIEFNQLALA 305

Query: 138 SRAGNRRAVELLVEINGKKIWV-----------------------LDIHLKSFCFLDSLE 174
           +  G+   +  ++  +   +                         L +      +     
Sbjct: 306 NAEGSDDMLNRVMTKDNIGLAALLETKEAAWSNGIRPDPSQIHQPLLVCTAHIHWDPQYC 365

Query: 175 NTYSPSCSLLSQQAQWLKDW---------ITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
           +       +L  + + L              +   S    ++ GDFN  ++         
Sbjct: 366 DVKLVQTMMLMNELKQLTQDAVGHSFRPGHNKADPSHTQLLLCGDFNSLLDSGVIEFLNS 425

Query: 226 KTIDP-------------------------NDSLIRFPKEKDSRC----NANKNLRNKIP 256
             I                           N+    F             +N     K  
Sbjct: 426 SRISANHPDFKELGYKTCLQKGIANFSEKTNEFTHPFRLSTAYTTDVMPYSNYTYDFKGL 485

Query: 257 IDYFVMDQNAYKFL-IQESFSEILYNEDDIKSRGKR--LSDHCPISIDYD 303
           IDY    +     L +        + E+ +     R   SDH  + ++ +
Sbjct: 486 IDYIFFSKTTMVPLGLLGPVDAEWFRENKVLGCPHRDIPSDHFSLLVELE 535


>gi|150866582|ref|XP_001386231.2| hypothetical protein PICST_33238 [Scheffersomyces stipitis CBS
           6054]
 gi|149387838|gb|ABN68202.2| conserved hypothetical protein [Scheffersomyces stipitis CBS 6054]
          Length = 388

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 82/316 (25%), Gaps = 48/316 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R+ + NI  L  +  V   +   KR       +        A++V LQE+     V  
Sbjct: 79  KLRVYTNNIR-LDNRYPVKGEQPWSKRKKQVINSIDFNTALGHANVVCLQEVLHNQLVDI 137

Query: 83  VFPKNT-----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +   N      W  +         +   +      +  +   N        P   +K  +
Sbjct: 138 LEGLNKNAEQIWTYYGVGRNDGLEAGEYAPILYKNSDWILLDNQTFWLSETPWKPSK-GW 196

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             A  R    + +E     +  +++    F                  + A+ + D +  
Sbjct: 197 DAALERIVTMVTLESRINPLIKVNVFNTHF---------DHRGVLARKKSAELIVDKMEN 247

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-EKDSRCNANKNLRN--K 254
              +  P  + GDFN +      +         +  L+ +      S      N      
Sbjct: 248 F--NDNPSFLCGDFNTQPKDQPYHVLSDAGFKDSRKLVDYDYSYGHSTTFTGFNKEKEDS 305

Query: 255 IPIDYFV---MDQNAYKFLIQE------------------------SFSEILYNEDDIKS 287
             IDY       Q  +                                    +       
Sbjct: 306 SIIDYIWSPYFSQGNFGNDTSPVKDYEDEVANEMNNYYNLEHHLVYDIVIKQFGILHNYF 365

Query: 288 RGKRLSDHCPISIDYD 303
           +G   SDH P+   Y+
Sbjct: 366 KGFYFSDHRPVVASYE 381


>gi|330508142|ref|YP_004384570.1| endonuclease/exonuclease/phosphatase family [Methanosaeta concilii
           GP-6]
 gi|328928950|gb|AEB68752.1| endonuclease/exonuclease/phosphatase family [Methanosaeta concilii
           GP-6]
          Length = 355

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/333 (14%), Positives = 103/333 (30%), Gaps = 63/333 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77
           KV + ++N+ +L ++       +          +LR     LDADI+ LQE+ +      
Sbjct: 4   KVSIATFNLMSLDDR------PDRSPSLDERIPVLRPQLIRLDADILCLQEICAQHERNG 57

Query: 78  ----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                A+ ++     +  F     +       S+++    + +  +   + Q  Y    A
Sbjct: 58  RPRLEALDRLLEGTPYESFNRASTVDRDGNYLSHHN----LVILSRFDIMEQHQYQHEYA 113

Query: 134 KDSFSRA--------------GNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYS 178
                +                 R  +   V   NG  + V+++HLKS    +   +  S
Sbjct: 114 PSPSYKKVTALPEELEAREISWERPILHAKVRLPNGAVLDVINLHLKSRRPTNIQGHKLS 173

Query: 179 P---------------SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNN 221
                           S      QA   +  I    +        + GDFN + + +   
Sbjct: 174 ERTWKTAFGWAEGVFISSMKRIGQALETRILIDNLFDDNRCALIAVCGDFNEEFDEVSIE 233

Query: 222 DDFWKTIDPNDSLIRF--------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                 ++   ++               +    +  +      +D+ ++ +    F    
Sbjct: 234 -AIRGDVENTGNMDLAMRVMVPTERNIPEPARYSLLHNGKGKMLDHILVSRTMLAFFKGS 292

Query: 274 SFSEILYNEDDIKSRGKRL---SDHCPISIDYD 303
                L +++ I    K     SDH P+   ++
Sbjct: 293 EVHNELLHDESIVFAPKIFYPESDHAPVIARFE 325


>gi|254485493|ref|ZP_05098698.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101]
 gi|214042362|gb|EEB83000.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101]
          Length = 229

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 73/253 (28%), Gaps = 44/253 (17%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
             D   + +  + LDADIV LQE                    +    +      S    
Sbjct: 10  QRDPDRIMRIIRGLDADIVVLQEADMRLGARPSALPLDAVQVQTGLIAVPVPGDVSIGWH 69

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
             A+ + ++   V      L G       A  R A+ +  +I+G  + ++  HL      
Sbjct: 70  GNAVLLHRQAEIVEVHHIDLPG-------AEPRGAMVVDADIHGVSLRIIATHLGLMRSS 122

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                           Q   L   +   + S  P +IAGD N             +T+  
Sbjct: 123 -------------RRAQLSRLIAHLD--ERSRRPTLIAGDMNEW----------SQTVGL 157

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 F         +         +D   MD +    L+     E            K
Sbjct: 158 GRLAHHFTIYAPG--KSFHARLPMAALDRIAMDDDFQ--LVDGGVVETQ--------DAK 205

Query: 291 RLSDHCPISIDYD 303
           R SDH PI +D+ 
Sbjct: 206 RASDHLPIWLDFT 218


>gi|217077897|ref|YP_002335615.1| endonuclease/Exonuclease/phosphatase family protein [Thermosipho
           africanus TCF52B]
 gi|217037752|gb|ACJ76274.1| endonuclease/Exonuclease/phosphatase family protein [Thermosipho
           africanus TCF52B]
          Length = 354

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 88/326 (26%), Gaps = 58/326 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           V      + ++ +  WNI             +G             +   +++     +A
Sbjct: 47  VSTLTIDSSRLTIFDWNIGYGGLGKDMDFFMDGGKKAITDKNDVLKNLEGIKEILIKNEA 106

Query: 67  DIVFLQEMGSYNAVAKVFPKNTW------------CIFYSTERLINHSKRDSNNDIHTAI 114
           DI  +QE+   +  +    +  +              +      +     +    I   +
Sbjct: 107 DIYLIQEIDRNSRRSGYVDELDYLKENVFKNYNIAFAYNYKVLFVPVPYLNPTGKIEAGL 166

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLD 171
           A   K          L G  +  +R     R  +   +++ NGK + +L+IH  ++    
Sbjct: 167 ATFSKYKIDEALRMALPGEYEWPTRLFQLDRCLILTRMKVKNGKDLVILNIHPSAYDPGG 226

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK---------INYLGNND 222
                      L  QQ +++ +   ++ E     +I GD+N +               + 
Sbjct: 227 ----------KLREQQLKFIMETAKKEFELGNYVIIGGDWNSEFFDNLDFKYTEEKPESY 276

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277
                    +              + K            ID F +  N     ++     
Sbjct: 277 IKLPDFFKLEGWKWAIDNTVPTNRSLKTKYIPGQSFVTVIDGFYVSPNIEIDYVKNIDLN 336

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
             +             DH P+ +   
Sbjct: 337 FEFT------------DHNPVILKIT 350


>gi|168061179|ref|XP_001782568.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665975|gb|EDQ52643.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 617

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 94/354 (26%), Gaps = 69/354 (19%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +      ++S+N+  +  +  E  S         T     L +      ADI+ LQE+ 
Sbjct: 256 TASFGTFTVLSYNVLSDLYATSEQYSYCPPWALAWTYRRQNLLREIVAYRADILCLQEVQ 315

Query: 76  SYNAVAK---VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           S +          K+ +   Y  +    ++      D       R +   V +       
Sbjct: 316 SDHYEDFYAVELEKHGYTGVYKKKTGEVYTGSVYVIDGCATFFRRDRFSLVKKYEVEFNK 375

Query: 133 AKDSFSRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDS----------------L 173
           A  S S A     ++A    +  +   + V+     +   +DS                 
Sbjct: 376 AAQSLSEALIPTTKKAALSRLLKDNVALIVVLEARDTGRPMDSQAVSGKRGQLLCVANTH 435

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGN------------ 220
            +       +   Q   L   + +    + +P ++AGDFN       +            
Sbjct: 436 IHANQELKDVKLWQVHTLLKGLEKIAASADIPMLVAGDFNSVPGSAPHCLLSTGRVDPAH 495

Query: 221 ---------------------------NDDFWKTIDPNDSLIRFPKEKDSRC----NANK 249
                                         F K    N ++ +     DS        N 
Sbjct: 496 PDLQVDPLNILRPASKLCHSLPLVSTAYASFGKMNGMNTTVEKLRLRMDSTTSEPQFTNC 555

Query: 250 NLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +DY     +      + E   E    +D      +  SDH  +  ++
Sbjct: 556 TRDFLGTLDYIFYTGDSLSVESLLELLDEDSLRKDTGLPSPEWSSDHIALLAEF 609


>gi|301611110|ref|XP_002935083.1| PREDICTED: 2',5'-phosphodiesterase 12 [Xenopus (Silurana)
           tropicalis]
 gi|73487270|gb|AAI01401.1| LOC734133 protein [Xenopus (Silurana) tropicalis]
          Length = 551

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 91/336 (27%), Gaps = 51/336 (15%)

Query: 12  FLVPCTASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            ++    +   + R VS+NI         LS +           +    ++LLR+     
Sbjct: 223 IVLTREGAGPGRFRTVSYNILAEVYARTELSREVLYPYCPAWALQGGYRHSLLRRELSGY 282

Query: 65  DADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            ADI+ LQE        A+  +  +      Y  +           +     +  +    
Sbjct: 283 RADILCLQEADREVFEAALGPLLEQLGMEGRYRGKERQQEGLATFYSRDRFRLLGQHDIS 342

Query: 122 RV-----LQQSYPLLGAKDSFSRAGNRR-----AVEL----LVEINGKKIWVLDIHL-KS 166
                    +   LLG    +  A  R      A+++     +E   ++I V + HL   
Sbjct: 343 LAGALLGEPRHSELLGRLSRYPGARERVLKRSSALQVLVLESIEEPSRRICVANTHLYFH 402

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------- 217
                      + + + L   A  L           +P V  GDFN   N          
Sbjct: 403 PKGGHIRLVQMAVALAHLGHVANEL--------YGGIPVVFCGDFNSLPNTGLHRFVQGG 454

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVM-DQNAYK 268
                + D      +   ++        +         N        +DY  +  +    
Sbjct: 455 AIAEDDEDWTSNGEEERCNMALTHPFSLASACGEPAYTNYIGEFHGCLDYIFIDSRQLAL 514

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             I    S     +          SDH  +  D  +
Sbjct: 515 EQIIPLPSHEEVTQYRALPSVAHPSDHLALVCDLKW 550


>gi|86359644|ref|YP_471536.1| putative endonuclease/exonuclease/phosphatase protein [Rhizobium
           etli CFN 42]
 gi|86283746|gb|ABC92809.1| putative endonuclease/exonuclease/phosphatase protein [Rhizobium
           etli CFN 42]
          Length = 239

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 66/258 (25%), Gaps = 56/258 (21%)

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             +A  FP + W    + +  I+  +                V  +   +  ++  L  +
Sbjct: 3   ADIAAFFPDHFWVYGPACDIHIDGGEGGLQPVRGTRFQFGNMVLSRWPILSTRTLLLPRS 62

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           +        R A E L+ I G  I V  +HL                     +Q Q+L  
Sbjct: 63  RTMAKINLQRGATEALIAIPGGAIRVYSVHLDHVSAD------------ERIRQLQFLNG 110

Query: 194 WITQKKESL-----------------VPFVIAGDFNRKINYLGN-------NDDFWKTID 229
            I    +                     ++I GDFN +                + +   
Sbjct: 111 HINAFVQEGGSLTGGGELDLPELPLPEDYMIMGDFNMEPESPEYCALAGAGGGYYGRVAR 170

Query: 230 PNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
               +  F      R  +           ++ +DY  +       L              
Sbjct: 171 IGTPIDAFAALGAYRPGSYSWMDPADHGKRMHLDYCFVSCGLEGRLKSARIDTQSL---- 226

Query: 285 IKSRGKRLSDHCPISIDY 302
                   SDH P+ I+ 
Sbjct: 227 -------GSDHFPVWIEI 237


>gi|313122838|ref|YP_004033097.1| exonuclease iii [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312279401|gb|ADQ60120.1| Exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ND02]
          Length = 265

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 69/271 (25%), Gaps = 50/271 (18%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           + +   +LD D++ LQE     +      +      +     +  S  +     +     
Sbjct: 18  VLKNLHDLDPDVLALQETKLPASGPSKKHQAALADLFPEYDFVWRSSMEPARKGYAGTMF 77

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K       + P +GA +     G       ++ +     +V  ++  +          
Sbjct: 78  LYKKGLDPVVTRPEIGAPEPMDFEGR------ILTLEFPDFYVTQVYTPNAGNGLVRLGD 131

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNN 221
                       + L        +   P + +GDFN                        
Sbjct: 132 RQEWDKCYRAYLEEL--------DKKKPVLASGDFNAAYQEIDLKHPENNHHSAGFTDEE 183

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLI 271
              +  +        F +              +            IDY+++       + 
Sbjct: 184 RAGFGQLLAAGFTDTFRQIHGQVEGVYSWWAQRVRTAKANNSGWRIDYWLVSNRLADQVE 243

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +           ++   G+R  DHCPI ++ 
Sbjct: 244 KS----------EMIETGERA-DHCPILLEI 263


>gi|296816088|ref|XP_002848381.1| endonuclease/exonuclease/phosphatase family protein [Arthroderma
           otae CBS 113480]
 gi|238841406|gb|EEQ31068.1| endonuclease/exonuclease/phosphatase family protein [Arthroderma
           otae CBS 113480]
          Length = 300

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 69/292 (23%), Gaps = 26/292 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+++ NI   +             R       L  + +      V LQE         +
Sbjct: 21  FRILTHNIRYATTSPSAGEQP-WSVRAPLIVNELDYHTRTSPESFVCLQEALHKQVQDVL 79

Query: 84  FP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                  ++ W                S       +    +   V     P +     + 
Sbjct: 80  SGLNSHVQDEWAYIGVGRDDGRQGGEYSPIFYRPGVWELMEKETVWLSETPTVP-SRGWD 138

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A  R     +         VL ++                      + A+ +   I + 
Sbjct: 139 AATIRIVNVGVFSHRASNQTVLAMNTHLDHKGT----------KARYESAKLILALIDKY 188

Query: 199 KESLVPF---VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANKNL 251
             S        +AGDFN + N     +         D+  + P       ++     ++ 
Sbjct: 189 LSSRSDIAGNFLAGDFNSEENQEAYKEFTKPGSPIVDAYKQVPKAKHYGNEASFTDFQDK 248

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                IDY ++       L                  G   SDH  +  D  
Sbjct: 249 TPGSRIDYVMLGPKRGSAL--PWAFNGYAVLPSKFDDGIFNSDHRAVVADVT 298


>gi|167835000|ref|ZP_02461883.1| exodeoxyribonuclease III [Burkholderia thailandensis MSMB43]
          Length = 256

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 83/307 (27%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +                +     AD V +QE  + + +  A
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWLGEQSADCVCVQEIKVSADDLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    + +  ++       +S     +       +              +G   S   + 
Sbjct: 47  EFVEPHGFRSYFHHAEKKGYSGAGLYSRREPDDVI--------------IGYGSSEFDSE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ V+ +++ S    D  +                L        ++
Sbjct: 93  GRY-----VEARFGKLSVVSVYVPSGSSGDERQQAKYRFMDEFMPHLAEL--------KA 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N     +   +                +   +      +   +  D R  
Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            +             R  + SDH P
Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSTAI-----------FRDVKFSDHAP 248

Query: 298 ISIDYDF 304
           +++DYD+
Sbjct: 249 LTVDYDY 255


>gi|301788616|ref|XP_002929727.1| PREDICTED: deoxyribonuclease-1-like 1-like [Ailuropoda melanoleuca]
          Length = 301

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 77/298 (25%), Gaps = 32/298 (10%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           A++  L+P     A+  R+ ++N   L+          S            +       D
Sbjct: 5   AVLLLLLPG---GAEAFRICAFNAQRLTL---------SKAAREHVMDTFVRILARC--D 50

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           I+ LQE+   +  A          F   +   ++S   S +   +    +   +    ++
Sbjct: 51  IMVLQEVVDSSGSALSLLLRELNRF---DGSGSYSFLSSPSLGRSTYMEKYVYIYRSHKT 107

Query: 128 YPLLGAKDSF-SRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLS 185
             L             R           K +  ++ + L +       E        L  
Sbjct: 108 QVLDSYVYEDKDDLFAREPFVAQFTFPSKVLPSLVLVPLHTTPKAVEQELNALYDVFLDV 167

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            Q                  ++ GDFN     L         +           +++   
Sbjct: 168 SQRWQ-----------TKDMILLGDFNADCASLTKKRLGELLLRTQAGFHWVIGDEEDTT 216

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      I   +  +     L   +      +    +     +SDH P+ ++ +
Sbjct: 217 VRASTHCAYDRI--VLHGERCQSRLHSAAAFNFPRSFQLTEEEALNISDHYPVEVELN 272


>gi|119358281|ref|YP_912925.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides DSM 266]
 gi|119355630|gb|ABL66501.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides DSM 266]
          Length = 256

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 67/304 (22%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+N                   +    L  +      D++ LQE+      A +
Sbjct: 1   MKIASWNVNG----------------IRARQEALVSWIGRNSPDVLVLQEVK-----ADL 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +          T + VRK       +       +       NR
Sbjct: 40  ADIPASISELEGYDSFWNGSSFRKGYSGTGMLVRKGAFSGTVE------WEIPAFDFENR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V     ++  +  +   ++      +                      +I        
Sbjct: 94  TCV-----LHTGQFTLTGCYVPRGEGDEHYRLKLRYFEQTRL--------FIENLLLEGR 140

Query: 204 PFVIAGDFNRKINYLGNNDDFWK---------------TIDPNDSLIRFPKEKDSRCNAN 248
             V  GD N     +  +    K                           +    R +  
Sbjct: 141 QIVFTGDMNVAHRDIDVHRSQNKPGAVGLRAEERSSIDACLALGLRDVMRERAPERNDLF 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID F +     + +   +             R +R SDH PI 
Sbjct: 201 TWWPYWKNARERNLGWRIDCFFLSAAIAERVTMVAV-----------DRDERSSDHAPII 249

Query: 300 IDYD 303
           ++  
Sbjct: 250 LELS 253


>gi|77917735|ref|YP_355550.1| putative nuclease [Pelobacter carbinolicus DSM 2380]
 gi|77543818|gb|ABA87380.1| putative nuclease [Pelobacter carbinolicus DSM 2380]
          Length = 375

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 77/294 (26%), Gaps = 43/294 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+ SWNI  L                  DY  + +     + D++ + E+         
Sbjct: 102 VRVGSWNIKKLGHGN------------QKDYATVAKIIDA-NFDVMAVVEVMQKGGGHPG 148

Query: 84  FP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-------KKNVRVLQQSYPL 130
           +          W    + E   N     S +    AI  R            +       
Sbjct: 149 YDKLVSVLGPEWNGLVTGEPRPNTG---SGSAEFYAILYRPALVRTCSGWGSLAFFPDND 205

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              +D      +R       E+      V    L +       +            + + 
Sbjct: 206 GSGQDLVPDIFSREPAFGCFEVPNTDGTVGFDFLLAGYHARWSQGD-KEQIKTEVARLKE 264

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +   + + +      +IAGDFN   + +                             +  
Sbjct: 265 VFQAMKESRPEEADLIIAGDFNLVPSEIKE-----------ALHFVPDTVASGSTLNSSG 313

Query: 251 LRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +   D+ ++       + +   +  +++ +  D      ++SDH P+   +
Sbjct: 314 AITQNVYDHVLIHSILATQEMIGHPTVIDVISSASDGHEFYTQVSDHLPVMARF 367


>gi|153008655|ref|YP_001369870.1| endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC
           49188]
 gi|151560543|gb|ABS14041.1| Endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC
           49188]
          Length = 285

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/283 (10%), Positives = 65/283 (22%), Gaps = 51/283 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                    +    +DAD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTAEVISEIDADVIALQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLFREGVVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAESILTALQ--EA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             VP ++ GD N             ++                    ++       +D  
Sbjct: 181 DTVPTLLIGDLN-------EWRIGKRSSLAALMPTFNHVATAVPSFPSRFPVF--ALDRV 231

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +              + +   E       +  SDH PI    D
Sbjct: 232 L----------GAPHNLVTSVEVHNTPLARLASDHLPIKAHLD 264


>gi|310639778|ref|YP_003944536.1| exodeoxyribonuclease iii rgfb-like protein [Paenibacillus polymyxa
           SC2]
 gi|309244728|gb|ADO54295.1| Exodeoxyribonuclease III RgfB-like protein [Paenibacillus polymyxa
           SC2]
          Length = 273

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 74/282 (26%), Gaps = 49/282 (17%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +        L  +      D++ LQE+        + P +    + +             
Sbjct: 14  ENQHDKLKQLAAFIDEQQFDVIALQEVNQSLEETPLTPDDLGAYYSADPEVVIKRDNYAY 73

Query: 96  ---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                                      +A+  K       +  +   +D +    +R+ V
Sbjct: 74  VLNGLLSDAYHWTWAPAHIGFAKYDEGLAILSKTPITATVNEYISSMQD-YDNYRSRKIV 132

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
            +          V+D     F            S   L  +   + D +        P  
Sbjct: 133 GIQ--------TVVDGVQAWFVSGHYNWWNDEESFRGLWDRTTEVLDPLA-----PAPVF 179

Query: 207 IAGDFNRKINYLGN-NDDFWKTIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFV 261
           + GDFN      G   D   ++   +       ++            ++    + IDY  
Sbjct: 180 VMGDFNNAAEVRGEGYDYVMQSGWSDTYSNAAVRDAGHTVIKAIAGWESNAEPLRIDYIF 239

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + A    +Q S   +          G  +SDH  ++++ +
Sbjct: 240 SSKAAQ---VQSSAVVLNGKT------GPVVSDHFGVAVELE 272


>gi|307822071|ref|ZP_07652303.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum
           SV96]
 gi|307736637|gb|EFO07482.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum
           SV96]
          Length = 502

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 91/295 (30%), Gaps = 45/295 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GS 76
           + ++++  N++   E                 ++ + +   +L+ D+V LQE+       
Sbjct: 237 EPLKVLILNLHCYQEDN-----------QDYKFSQIAKAINDLNVDVVCLQEVAELWNDG 285

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
               A    K       +   +         +     +A+  K   +L+Q    +     
Sbjct: 286 AGDWASNSAKIINDRLATPYHIHTDWSHLGFDKYREGVAILSKYP-LLKQDAKYVSDSHD 344

Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                +R+ V   +++    ++ V   HL  +    +              Q Q L +W 
Sbjct: 345 VHSIHSRKVVMAQIKVPYMGRVNVFSAHLSWWEDGFAG-------------QFQRLCEWA 391

Query: 196 TQKKESL-VPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             K+ +     ++ GDFN      G       +    + +  N   +     + +     
Sbjct: 392 EAKQSAHVNTTLLCGDFNIAAGSTGYHLVVDGHQYDDQYLAANSQGVFEKIFRVNDPYWQ 451

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             L +   IDY  +++                     +    R+SDHC   + ++
Sbjct: 452 NYLSDDYRIDYIFLNK-------TSELQVFSAKVLFTEQDYGRVSDHCGYFMTFE 499


>gi|190892451|ref|YP_001978993.1| endonuclease/exonuclease/phosphatase family protein [Rhizobium etli
           CIAT 652]
 gi|190697730|gb|ACE91815.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CIAT 652]
          Length = 369

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/366 (12%), Positives = 102/366 (27%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YTLL--RQYAKNLD----- 65
            +RL ++N+  L  +   + ++N +++              Y  L   +     D     
Sbjct: 2   SLRLATFNVENLLTRFDFTGFRNQLRQDRVIKLFEVSSEGVYQQLEQARVIAATDDTRQM 61

Query: 66  ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                    ADI+ LQE+ +  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  TALAIADADADILCLQEIDNMAALQAFEYGYLFRMVGNGYRQKFLVEGNDSRGIDVAVLM 121

Query: 117 RK------KNVRVLQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKI 157
           R+      +      +S+ +   +D                +   R  +EL + I G+ +
Sbjct: 122 REETRDGQRIELKDIRSHAMTTYRDFDLFDEDLALTNRIDDKIFKRDCLELDLLIGGRPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFNR 213
            +  +H KS        +    +  L   +A+ ++  I  +  +       F I GD N 
Sbjct: 182 SLYVVHFKSMGNPRDGLDGRQSTLPLRRAEARAVRRIIEHRFGAGHTAKKSFAICGDMND 241

Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255
                             +                      + +        + R     
Sbjct: 242 YQERVDVVGRRGAGYRFEHQPEAESALDVFSHDGFVENVMARRQPLDRWTLYHARGPQEQ 301

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCP 297
               +DY  +               I               +           + SDHCP
Sbjct: 302 HLCQLDYIWLSPALAAHNSGRLPEIIRKGQPYRTVFPPGQEVERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 VVMTLD 367


>gi|110677635|ref|YP_680642.1| hypothetical protein RD1_0227 [Roseobacter denitrificans OCh 114]
 gi|109453751|gb|ABG29956.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 417

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/357 (10%), Positives = 95/357 (26%), Gaps = 66/357 (18%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           + +L      +    + ++ +R+ ++N   L  +    L ++ V+   +    +      
Sbjct: 67  RSLLLTAAISLNAACAWSETLRVATFNT-GLERKGPALLLRDIVRGEDAQIEAVASVLTT 125

Query: 64  LDADIVFLQEMG------SYNAVAKVFP--KNTWCIFYSTERLINH-------------- 101
           +  DIV LQ         + +A +KV       +   ++                     
Sbjct: 126 IAPDIVALQSFDYDLTGAALSAFSKVLRDVGLDYPYQFAALPNTGMRTDLDMDGNRRRAE 185

Query: 102 -----SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---------- 146
                     +     AI  +   V    Q +  +  +D       + A           
Sbjct: 186 ARDAQGYGFFSGQGGMAILSKYPIVTDEVQDFSSMLWRDFPGALLPQTAAGPFPSEQAQA 245

Query: 147 ----------ELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                      + V++ G  ++ ++ +H     F    +     +   +    ++L    
Sbjct: 246 IQRLSTTGHWVVPVDVPGLGRVTLMTLHASPPVFDGPEDRNGKRNHDEIVFWQRYLDG-- 303

Query: 196 TQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFP------KEKDSRCNAN 248
           +        FV+ GDFN+   +  G  +     I         P      +      +  
Sbjct: 304 SFGPAPDRQFVLLGDFNQDPVDGEGLKNAIRSLISDPRLQDVEPTSTGSAEATGDPFDTA 363

Query: 249 KNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    + +DY     +              +         +  S H  + +D 
Sbjct: 364 DWDDPVPGNMRVDYVFPSSDWRVQEAGV-----YWPSGPAGVVAQTASRHRLVWVDL 415


>gi|256419905|ref|YP_003120558.1| endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM
           2588]
 gi|256034813|gb|ACU58357.1| Endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM
           2588]
          Length = 367

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 77/299 (25%), Gaps = 48/299 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT-LLRQYAKNLDADIVFLQEMGSYN 78
             ++  ++++N + +   +          R  S     +    +    DI+ +QE  +  
Sbjct: 101 SDRQFTIMTFNTSNMGLNDY---------REDSVLQGSIYDMLREASPDILCMQEFYTNE 151

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                   ++                   +  H  I +  +   V     P   +     
Sbjct: 152 GPNFTNHIDSISRTLGYPYHFFTCDMSHWDYWHYGIVLFSRFPIVRSSKIPCGYSSAGSG 211

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------------NTYSPSCSLL 184
            +     ++  + + G  I VL   L+S+ F  +                N  S     +
Sbjct: 212 SSF----LQSDILVQGDTIRVLTAQLQSYMFRGNDYDLLEKGKGTFSGIRNLASKMKHTI 267

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            ++A   +        S    V+ GDFN        N               F K+    
Sbjct: 268 HKRAAQSRKMAELIAASPYKVVVCGDFNDPPVSYTYNTISANM------QDAFLKDGFGV 321

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 L   + IDY +          Q+      Y     K        H PI     
Sbjct: 322 GRTLSFLAPTLRIDYILA---------QKPIRVKSYKTFHRKGFQ-----HFPIMAGLS 366


>gi|239942130|ref|ZP_04694067.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239988594|ref|ZP_04709258.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291445578|ref|ZP_06584968.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces
           roseosporus NRRL 15998]
 gi|291348525|gb|EFE75429.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces
           roseosporus NRRL 15998]
          Length = 332

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 78/320 (24%), Gaps = 62/320 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   + A ++R+++ N+    +            R            K    D+V LQE 
Sbjct: 42  PGKQAAASELRVMTLNLWHGGD------------RVDDGLAKQLAVIKKHRPDVVGLQET 89

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             ++A  ++  +  W  + S   L                 +  +     +       A 
Sbjct: 90  SGHSA-REIAEELGWDHWQSDADLG----------------IISRFPFTSEVETSQ-AAA 131

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R       E+ +            +   F  +   E     + S  + QA+ +   
Sbjct: 132 GVRIRIDEATGQEVELWTAHLGYDPYGPYDACFDRMPVEEIFRREAESGRTPQAEAIAKD 191

Query: 195 I--TQKKESLVPFVIAGDFNRKINYLGNN------------DDFWKTIDPNDSLIRFPKE 240
           +          P ++ GDFN   +                 D     I     L    +E
Sbjct: 192 LAPKIAAADETPVLLVGDFNTPSHLDWTEATKDSHCGYGQVDWPVTKIFEKAGLKDSFRE 251

Query: 241 K-------DSRCNANKNLR---------NKIPIDYF-VMDQNAYKFLIQESFSEILYNED 283
                        +    +          +  ID+   +                     
Sbjct: 252 ANPDPAAVPGNTWSPVYPKHEGSTGVDEPQDRIDFIDYVGDKLTVKDSVSFVEGDPKPVP 311

Query: 284 DIKSRGKRLSDHCPISIDYD 303
           D ++     +DH  +   + 
Sbjct: 312 D-QAGNAWPTDHAAVLTTFT 330


>gi|157427810|ref|NP_001098811.1| 5'-tyrosyl-DNA phosphodiesterase [Bos taurus]
 gi|281312449|sp|A7YWI9|TYDP2_BOVIN RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
 gi|157278989|gb|AAI34604.1| TTRAP protein [Bos taurus]
 gi|296474010|gb|DAA16125.1| 5'-tyrosyl-DNA phosphodiesterase [Bos taurus]
          Length = 364

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 80/287 (27%), Gaps = 48/287 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
              ++WNI+ L     +                +  Y      D++FLQE+         
Sbjct: 116 FSFITWNIDGLDMNNLL-----------ERARGVCSYLTLYSPDVIFLQEV--------- 155

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +   +               TAI ++K  V+   Q                R
Sbjct: 156 --IPPYYAYLKKKASSYKIITGREEGYFTAIMLKKSRVKFKSQEIIPFPNT-----QMMR 208

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V ++G ++ ++  HL+S                    Q + + + + +      
Sbjct: 209 NLLCVHVSVSGNELCLMTSHLEST----------RGHAKERMNQFKMVLEKMQE-APGSA 257

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPI 257
             + AGD N +   +         I      +       +  +     N       K+  
Sbjct: 258 TVIFAGDTNLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYTWDTQMNSNLGIAANCKLRF 317

Query: 258 DYFVMDQNAY-KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D       A    +I +S   +     +    G+  SDH  +    D
Sbjct: 318 DRIFFRAAAEGGHIIPQSLDLLGL---EKLDCGRFPSDHWGLLCTLD 361


>gi|78049571|ref|YP_365746.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038001|emb|CAJ25746.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 266

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +                +    DAD++ +QE  +     ++
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQETKAQE--HQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +         +  S    ++ +A+  ++     ++       D   R    
Sbjct: 44  AGPD-----FLPTGYKAWFRDASTKKGYSGMAIYSRHEPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  ++          Q  QWL+  + Q   S  
Sbjct: 96  ------IEARFGNLSVVSFYIPSGSSGELRQDYK-------FQVMQWLRPILEQWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN------DSLIRFPKEKDSRCNA---------- 247
            +V+ GD+N     L   +      +        D L     +     N           
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADAPEDANPAEGRGWVDSY 202

Query: 248 ---------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       L   S             R 
Sbjct: 203 RVLHPQGQDYTWWSNRGAARANNVGWRIDYQLVTPGLRDTLKACSI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 ERFSDHAPYIVDY 264


>gi|325265848|ref|ZP_08132534.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394]
 gi|324982486|gb|EGC18112.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394]
          Length = 257

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 75/305 (24%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +                         Y     ADIV +QE+ +  A    
Sbjct: 1   MRIISANVNGIRSAYKKGF---------------LDYMAQSGADIVCVQELKAQEA-DLA 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +                 ++ +A+  K           +G          R
Sbjct: 45  DDMKNPHGMHGVWHCAQ-------KRGYSGVAIYSKRTPDAVH----IGLGLEQFDQEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +   + V+ ++L S    +  +                LK        S  
Sbjct: 94  F-----VRADFGNLSVISLYLPSGTSAEERQAYKYKFLDAFYPILAELKA-------SGR 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                    +   +         
Sbjct: 142 DVVVCGDWNIAHQNIDIKNWKGNQKNSGFLPEERAWIGKVIGELGWVDAWRTLYPEVAGY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY ++     + +                 +  + SDH P+ 
Sbjct: 202 TWWSNRGQAYAKDVGWRIDYQMVTPQLAQAMQSAHV-----------YKDVKFSDHAPLV 250

Query: 300 IDYDF 304
           +DY +
Sbjct: 251 VDYAY 255


>gi|260824621|ref|XP_002607266.1| hypothetical protein BRAFLDRAFT_125173 [Branchiostoma floridae]
 gi|229292612|gb|EEN63276.1| hypothetical protein BRAFLDRAFT_125173 [Branchiostoma floridae]
          Length = 363

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 88/312 (28%), Gaps = 38/312 (12%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M+    L  +   +    SV + +++ ++NI      +  +               +   
Sbjct: 1   MMLSVTLLALSMSLSAMTSV-EALKIGAFNIQIFGTNKMENGD-------------VADM 46

Query: 61  AKNL--DADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
              +    DI+ +QE+      A+  +  +           +I+     +N+    A   
Sbjct: 47  LVKICMRYDILLIQEIRDNEGTAILDLLDRVNRAGPADYAMVISDRLGRTNSKEQYAFFY 106

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRA-GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           R      L  SY      +S       R    +    N   +    +        +++  
Sbjct: 107 RTDVGLTLTNSYHYDDGDESTGNDTFQREPFIVRFSSNRTVVDDFVLVAIHTDPQEAVSE 166

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSL 234
                           ++ +++ + +    +I GDFN   +++               + 
Sbjct: 167 LQELDSVR--------ENIVSKWRITN--IMILGDFNADCDFVRPIHWDTIPLWTRYRTY 216

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKS---RGK 290
                +       + +       D  V+   +    ++  S     +  D          
Sbjct: 217 DWLIGDDVDTTTTSTDCAY----DRIVVSGPSLRGGIVLNSAGVYDFPNDLNLLCACEAL 272

Query: 291 RLSDHCPISIDY 302
            +SDH P+ +D 
Sbjct: 273 AVSDHYPVEVDL 284


>gi|260655439|ref|ZP_05860927.1| exodeoxyribonuclease III [Jonquetella anthropi E3_33 E1]
 gi|260629887|gb|EEX48081.1| exodeoxyribonuclease III [Jonquetella anthropi E3_33 E1]
          Length = 259

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 74/305 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             R+ ++N+N+L                 S   +L ++      D++ +QE    +    
Sbjct: 2   TFRVGTFNVNSL----------------RSRLPVLERWLPTAGVDVLCVQETKVTDD--- 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    + +    +    +  +AV  +       S    G  DS     +
Sbjct: 43  -------QFPVAEVEAMGYHAVFAGQKSYNGVAVLSRRAPDESVS----GFNDSQEPNAD 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            R + +        +W+ + ++     +D  +  Y             L   +  +    
Sbjct: 92  SRLLAVRF----GDLWIFNSYVPQGKAIDHPDYQYKKEFLSR------LSGLVAARLPGN 141

Query: 203 VPFVIAGDFNRKINYLGNNDDFWK--------------TIDPNDSLIRFPKEKDSRCNAN 248
              +  GD N     L   +   K               +  +  +    +  D      
Sbjct: 142 --VLWVGDLNVAPTPLDVTNPTNKKDHVCFIQELRDLYALKTSALVDLLRRFHDGEE-LY 198

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            ID+ +                     D      ++ SDH P+
Sbjct: 199 SFFDYRVKNALERNIGWRIDHMLASPALAGLCRNCWI-------DKEPRGWEKPSDHTPM 251

Query: 299 SIDYD 303
             D+D
Sbjct: 252 LADFD 256


>gi|242033909|ref|XP_002464349.1| hypothetical protein SORBIDRAFT_01g016750 [Sorghum bicolor]
 gi|241918203|gb|EER91347.1| hypothetical protein SORBIDRAFT_01g016750 [Sorghum bicolor]
          Length = 384

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 83/299 (27%), Gaps = 47/299 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + V+++++N+    E+  +                +    ++   D++  QE+     + 
Sbjct: 114 KTVKIMTYNV-WFREELELI----------RRMNAIGDLIQHHSPDLICFQEVTPNIYL- 161

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + W  +  +       +R   +   + +AV+                K  ++   
Sbjct: 162 LFEKSDWWQAYKCSLPHEVAMQRPYYSMQMSKLAVKS------------FDRKPFYNSKM 209

Query: 142 NRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R      V + G  K+ V   H +S                    QA      +   + 
Sbjct: 210 GRELCIADVIVGGLTKLVVATSHFESPSPGPPTW--DQMFSKERVGQANESVRTLGAFRN 267

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL----IRFPKEKDSRCNANKNLRNKIP 256
                +  GD N      G        ID  D L      +  +  +    + N + +  
Sbjct: 268 ----VIFCGDTNWDDKGDGPFPLPDGWIDAWDELKPGENGWTYDTKANVMLSGNRKLQKR 323

Query: 257 IDYFV--MDQNAYKFLIQESFSEILYNEDDIKSRGKR----------LSDHCPISIDYD 303
           +D F+  +       +       I       + + ++           SDH  + +   
Sbjct: 324 LDRFMCKLSDFKVNSIEMIGEEVIPGVTYVKEKKVRQEIHQLVLPVLPSDHFGLVLTIS 382


>gi|189238676|ref|XP_969559.2| PREDICTED: similar to ap endonuclease [Tribolium castaneum]
          Length = 1246

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 75/308 (24%), Gaps = 79/308 (25%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YN 78
            A    + +WN++ L                           K    DI+ +QE     Y 
Sbjct: 990  APNFHITTWNVDGLRSWLKKGC---------------LDILKYDKPDILCIQETKCAVYK 1034

Query: 79   AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +V     +   +       ++           I V+ K + V+       G      
Sbjct: 1035 LPEEVKTIEGYETLWCCSDKDGYAG--------VGIMVKDKPLNVI------YGIDSKEH 1080

Query: 139  RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                R      + +  +  +V+++++                     +  + L       
Sbjct: 1081 DTEGRC-----ITVEYETFFVVNVYVPHAGRNLVTLPKRLDWNEQFEKFIKNL------- 1128

Query: 199  KESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDS 243
             +S  P +I GD N     +                   D       N  +  +      
Sbjct: 1129 -DSQKPVIICGDMNVAHKEIDLANPKTNTNSAGFSVEERDGMTAFLGNGYVDIYRHLYPE 1187

Query: 244  RCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
            +  A                  +DYF++ Q     +                      SD
Sbjct: 1188 KEKAYTFWIYMRNARPNNVGWRLDYFLVSQRFVDNVCDNIIH-----------SDVMGSD 1236

Query: 295  HCPISIDY 302
            HCP+S+  
Sbjct: 1237 HCPLSLHI 1244


>gi|329116616|ref|ZP_08245333.1| exodeoxyribonuclease III [Streptococcus parauberis NCFD 2020]
 gi|326907021|gb|EGE53935.1| exodeoxyribonuclease III [Streptococcus parauberis NCFD 2020]
          Length = 275

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 82/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVIDTLVAQDADIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +   ++     +  S  +     +       K       ++P +GA  +    G  
Sbjct: 55  KHIESIESYFPEYVHVWRSSVEPARKGYAGTMFLYKKSLNPIVTFPEIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  ++    L        ++  
Sbjct: 114 -----IITLEFDDCFVTQVYTPNAGDGLKRLTDRQLWDIKYAEYLAQL--------DAQK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N   N                       +  +  +     F        N  
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSAGFTDEERAGFTMLLGHGFTDTFRHIHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +++         +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLTSNRVADKVLKSEMINSGARQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 LLEID 274


>gi|301114885|ref|XP_002999212.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Phytophthora
           infestans T30-4]
 gi|262111306|gb|EEY69358.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Phytophthora
           infestans T30-4]
          Length = 482

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/341 (13%), Positives = 93/341 (27%), Gaps = 91/341 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
           ++RLV+WN+N L                      L Q+ ++L+ADI+ LQE  +      
Sbjct: 4   ELRLVTWNVNGLRAV------------LQRLEQNLLQFLESLEADIICLQETKLTRSELD 51

Query: 81  AKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            ++     +  FYS  R    +S   +           ++ +    Q+   +G   S   
Sbjct: 52  EELVRPPGFDAFYSFCRHRGGYSGVVTFVKGDLPTVAAEEGLTGHWQTKDNVGHVGSLHD 111

Query: 140 AGNRRAVE------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
               + +         +  + +   +L+ +  +    D LE                L+D
Sbjct: 112 ELPSKILNDLEAEGRCIITDHQTFVLLNTYCPALASADRLEYKLQFHG--------LLED 163

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------------------NDDFWKT-------- 227
            +   + +    ++ GD N     + +                                 
Sbjct: 164 RVNALRAANKRVIVVGDINIAHREIDHCDPHAHRDDGSSFGDHPCRKWMDSFVGVSGEKY 223

Query: 228 --------IDPNDSL----IRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNA 266
                   I   +        +      +  A                  IDY + D   
Sbjct: 224 LPNPHSDDIVDGEPAVKMIDTYRHFHPDQTKAYTCWNTQTGARQTNYGTRIDYILADPTF 283

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS----IDYD 303
            + +   S               +  SDHCP+     ++ +
Sbjct: 284 IECVSSCSI-----------DAERLGSDHCPVLMSCTVELE 313


>gi|225024988|ref|ZP_03714180.1| hypothetical protein EIKCOROL_01877 [Eikenella corrodens ATCC
           23834]
 gi|224942218|gb|EEG23427.1| hypothetical protein EIKCOROL_01877 [Eikenella corrodens ATCC
           23834]
          Length = 257

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +        +               +Y     ADIV +QE+ +  A   +
Sbjct: 1   MRIISANVNGIRSAYKKGFY---------------EYLAASGADIVCIQELKAQEA--DL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                                 +    ++ +A+  K      Q+   +   D+  R    
Sbjct: 44  DDSMRAPHGMHGVW------HCAEKRGYSGVALYSKREPDRVQTGMGIAEFDAEGRF--- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V+++   + V+ ++L S    +  +       +      + L       K    
Sbjct: 95  ------VQVDFGNLSVISLYLPSGSSSEERQQLKFRFLAAFYPMLREL-------KTQGR 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKDSRCNAN 248
             VI GD+N     +   +      +                    +   +         
Sbjct: 142 DIVICGDWNIAHQNIDLKNWKGNLKNSGFLPEEREWIGKVIVELGWVDIWRTLYPEMPGY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY +      +                   + ++ SDH P+ 
Sbjct: 202 TWWSQRGQAYAKDVGWRIDYQMATPALAERARSAHV-----------YKQEKFSDHAPLV 250

Query: 300 IDYDF 304
           +DYD+
Sbjct: 251 VDYDY 255


>gi|206974292|ref|ZP_03235209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus H3081.97]
 gi|217957955|ref|YP_002336499.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH187]
 gi|222094154|ref|YP_002528211.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus Q1]
 gi|229137219|ref|ZP_04265836.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
 gi|206747532|gb|EDZ58922.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus H3081.97]
 gi|217066613|gb|ACJ80863.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH187]
 gi|221238209|gb|ACM10919.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus Q1]
 gi|228646214|gb|EEL02431.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
          Length = 263

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 72/269 (26%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------TERLI 99
                L +  +  + D++ LQE+        V        F                 + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  NGK I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTAYWK-TRKIVSATIAYNGKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L + +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMERVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +          S
Sbjct: 183 EGYEYMMQKGLYDTYGLAIEKDEGTTVQGEIAGWDENKHNLRIDLILCN---------RS 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +    +SDH  + +  D
Sbjct: 234 EKVCSSKVIFNGTNRNIISDHFGVEVQVD 262


>gi|315223109|ref|ZP_07864977.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           anginosus F0211]
 gi|315187798|gb|EFU21545.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           anginosus F0211]
          Length = 271

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 72/281 (25%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
                 L +       D++ LQE+       +V     +                     
Sbjct: 18  EKKLDQLAERILQEKYDVICLQEVNQEMESEQVVQAPFYHAVDGAIAIHKDHFAHCLVER 77

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+   N   L+    L+   +  +    R+ +  
Sbjct: 78  LVEKGLIYHWSWAYNHIGFDRFHEGVAILSLNP--LKPRELLVSDANDPTDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E++G+ + V   HL            ++        Q +       +  +  +P V+ 
Sbjct: 136 ETEVDGRLVTVASCHLSW----------WNKGFQEEWAQIEE------ELLQCNMPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYFVMD 263
           GDFN  + Y G        +   DS             +         +  + IDY    
Sbjct: 180 GDFNNPVGYEGYQHILRSPLALQDSHAVAATVVGTATVEGDIAGWAGNKEALKIDYIFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ++         F                +SDH  +  +  F
Sbjct: 240 KDFNIEKSAVVFDGKATPV---------VSDHFGLEAEVAF 271


>gi|306846047|ref|ZP_07478613.1| Endonuclease/exonuclease/phosphatase [Brucella sp. BO1]
 gi|306273536|gb|EFM55387.1| Endonuclease/exonuclease/phosphatase [Brucella sp. BO1]
          Length = 285

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 67/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIALQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLREGIVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSALQ--EA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 181 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATAVPSFPSRFPVLALDR 230

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              + I   E       +  SDH PI    D
Sbjct: 231 VL----------GAPDNLITSVEVHNTPLARLASDHLPIKAHLD 264


>gi|148558307|ref|YP_001257966.1| endonuclease/exonuclease/phosphatase family protein [Brucella ovis
           ATCC 25840]
 gi|148369592|gb|ABQ62464.1| endonuclease/exonuclease/phosphatase family protein [Brucella ovis
           ATCC 25840]
          Length = 285

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/284 (10%), Positives = 67/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIALQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLREGVVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSALQ--EA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 181 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATAVPSFPSRFPVLALDR 230

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +   +        S               +  SDH PI +  D
Sbjct: 231 VLGAPDNLI----TSVKVHNT------PLARLASDHLPIKVHLD 264


>gi|154339255|ref|XP_001562319.1| RNA-editing complex protein MP100 [Leishmania braziliensis
            MHOM/BR/75/M2904]
 gi|134062902|emb|CAM39349.1| putative RNA-editing complex protein MP100 [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 1025

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 84/314 (26%), Gaps = 37/314 (11%)

Query: 23   KVRLVSWNINTLSEQEGVSLW--KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             +R+++WN+         +          +   Y +L +     DAD+V +QE+    A 
Sbjct: 712  TLRVLTWNVMFDRYSNQPTPLGMPGIDWCSPKRYPVLAKLIDAEDADVVGMQEVERPFAE 771

Query: 81   AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                       +  +    +         +      R    ++   + P      S    
Sbjct: 772  YLAAQPWCRERYIMSCSPGSSILHPWGVLLLVRRGGRWPLQQLKHLNVPAWSGHVSLMPV 831

Query: 141  GNRRAVELLVEIN-------------GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                                      GK+   +   + + C +  L      +    + Q
Sbjct: 832  ATLDLTAATAHSGKSVTEGDDSAGKSGKRRSAVSPWVVNVCSVHLLAPFVKVNEVARTGQ 891

Query: 188  AQWLKDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIRFPKEK 241
             Q L+  +T++ +     ++ GDFN   +            + W  + PND       E 
Sbjct: 892  DQALRHALTRQLQGDT--LVMGDFNDWPSNEFLMPPETRYAECWPIVHPNDYGKTM-DES 948

Query: 242  DSRCNANKNLRNKIPIDYFV-------MDQNAYKFLIQESFS------EILYNEDDIKSR 288
            ++ C            D             +    L              + N +     
Sbjct: 949  NTFCKLKIEEIFFGRSDKVFLRTGTAAASSHTRGVLKPVEAHLVGTRSVNVENSNQEAPA 1008

Query: 289  GKRLSDHCPISIDY 302
                SDH  +S+ +
Sbjct: 1009 YLFPSDHYGVSMQF 1022


>gi|67482299|ref|XP_656499.1| endonuclease/exonuclease/phosphatase domain containing protein
           [Entamoeba histolytica HM-1:IMSS]
 gi|56473700|gb|EAL51112.1| endonuclease/exonuclease/phosphatase domain containing protein
           [Entamoeba histolytica HM-1:IMSS]
          Length = 320

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 87/316 (27%), Gaps = 47/316 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R++++N+         +   +   R            +  D DI+  QE+       
Sbjct: 13  KPIRILTYNMYLRPMLISAAGHDHKDSRLKVFCKE-----RLKDFDIICFQEVFKELNWR 67

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +              R+               + +  +   V  Q + +           
Sbjct: 68  REKLLKKAKKAGFKYRIQTEKPLFPLFLCDAGLVIISRFPIVENQ-FRMYTRGIYADAVA 126

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK- 199
           ++  +   +E+   K I V D H ++   LD       PS        +    ++ +K  
Sbjct: 127 SKGVLYAKIEVQPEKYILVFDTHTQADYTLDPE--KAKPSRDRRMIHVREYAAFVQEKTT 184

Query: 200 ESLVPFVIAGDFN-------RKINYLGNNDDFWK------------TIDPN--------D 232
            +  P +  GDFN                 +F +             +  N         
Sbjct: 185 GNNFPAICCGDFNVNGRAGTDGTTESPEYTEFLQNFVIPNGELVDLLLRDNHGIQPVTFG 244

Query: 233 SLIRFPKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                    ++ C+      +    K  +DY        +     + +      D    R
Sbjct: 245 DSFVDENGTETPCDTEITYESQCMDKSRLDYIF---QLKRPNEDPTITCKNCRVDKFPVR 301

Query: 289 GKRL---SDHCPISID 301
           GK+    SDH  ++ D
Sbjct: 302 GKKYPFMSDHFGVTCD 317


>gi|254719872|ref|ZP_05181683.1| Endonuclease/exonuclease/phosphatase [Brucella sp. 83/13]
 gi|265984886|ref|ZP_06097621.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13]
 gi|306837574|ref|ZP_07470446.1| Endonuclease/exonuclease/phosphatase [Brucella sp. NF 2653]
 gi|264663478|gb|EEZ33739.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13]
 gi|306407358|gb|EFM63565.1| Endonuclease/exonuclease/phosphatase [Brucella sp. NF 2653]
          Length = 285

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 67/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIALQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLREGIVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSAL--HEA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 181 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATAVPSFPSRFPVLALDR 230

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              + I   E       +  SDH PI    D
Sbjct: 231 VL----------GAPDNLITSVEVHNTPLARLASDHLPIKAHLD 264


>gi|62085890|gb|AAX63336.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 69/303 (22%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPKLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDLRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY         + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|158318498|ref|YP_001511006.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
 gi|158113903|gb|ABW16100.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
          Length = 326

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 83/324 (25%), Gaps = 53/324 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRT-------------TSDYTLLRQYAKNLD----ADI 68
           L  WN+  L ++E        + RT                 + L      ++     D+
Sbjct: 7   LAWWNLENLFDEENSPRRTEKLTRTLGDDLAGWTPQLRDRKVSQLASVIAQMNGGAGPDL 66

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + + E+ +   + ++               I H+  D    I  A         +L    
Sbjct: 67  LGVCEVENRFVL-ELLAAAVADRLGGRRYEIVHADTDDARGIDVAFLYD---PTLLTAPA 122

Query: 129 PLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             +       R   R  V++  + + G+   V   H  S          Y          
Sbjct: 123 GQVFFHVVMRRNATREIVQVNFQTHTGRTWAVFGNHWPSRSGGQYESAGYRAIAGET--- 179

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLG------NNDDFWKTIDPNDS--LIRFPK 239
             +    + ++       +  GDFN +           +     + I+ +          
Sbjct: 180 LAYFHQRVREEHGQDTAALAMGDFNDEPFDTSLVAHALSTRQAVRVINADTPRFWNLMWP 239

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYK-----FLIQESFSEILYNEDDIKSRGKRL-- 292
              +             +D F+++ N  +         +S   + + E        R   
Sbjct: 240 AAGTPEGTFYFQNEPNLLDQFLVNANMARPTSPLHANPDSVRILRFPELVHTGDYPRPRP 299

Query: 293 -------------SDHCPISIDYD 303
                        SDH PI +   
Sbjct: 300 FGGMGAAVDETGYSDHFPIGMTVT 323


>gi|320036533|gb|EFW18472.1| DNA lyase [Coccidioides posadasii str. Silveira]
          Length = 600

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 77/342 (22%), Gaps = 84/342 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
             RL +WN+N +        W+ +           +     L+ADI+ LQE  +   +  
Sbjct: 2   TFRLTTWNVNGIRNPFSYEPWRGT--------QSFQGMFDLLEADIIVLQELKIQRKDLR 53

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--------------VRVLQQ 126
             +     W  F+S   L  + K  S   I+T  A                        +
Sbjct: 54  DDMVLVPGWDCFFS---LPKYKKGYSGVAIYTRNATCSPIYAEEGVTGILCPPNSTSSYR 110

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LL 184
             P       +         E+  E    +   + +   +F  L                
Sbjct: 111 ELPESEQIGGYPTDEQLSTSEVSAETLDSEGRCVILEFPAFVLLGVYCPANRDETRDGFR 170

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------------------YLGNNDD 223
                 L   I          V+AGD N   +                            
Sbjct: 171 LGFLNALDHRIRNLIFLGKRVVVAGDLNISRDAIDSAHALEQIRKSRLTTDEFLSSPARI 230

Query: 224 FWKTIDPNDSLIRFPK--------------EKDSRCNANKNL---------RNKIPIDYF 260
            +  +     +                      +R                     IDY 
Sbjct: 231 IFNRLVEGGRVSHIEGVDKKDAVLWDMCRSFFPARSGMYTCWEQRINARPGNFGARIDYI 290

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   +   ++                  G   SDHCP+   +
Sbjct: 291 LCSLDMKDWMSIADIQ-----------EGLMGSDHCPVYAIF 321


>gi|308044361|ref|NP_001183664.1| hypothetical protein LOC100502258 [Zea mays]
 gi|238013760|gb|ACR37915.1| unknown [Zea mays]
          Length = 369

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 81/301 (26%), Gaps = 49/301 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + V+++++N+    E+  +                +    ++   D++  QE+     + 
Sbjct: 82  KTVKIMTYNV-WFREELELI----------RRMNAIGDLIQHHSPDLICFQEITPNIYL- 129

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + W  +  +       +R       + + V+                K   +   
Sbjct: 130 LFEKSDWWQAYKCSLPHKMAMERSYYCMQMSRLPVKS------------FDRKPFLNSKM 177

Query: 142 NRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R      V + G  ++ +   HL+S C                  QA      +   + 
Sbjct: 178 GRELCVADVTVGGSIELVLATSHLESPCPGPPTW--DQMFSKERVAQASESLKTLGAFRN 235

Query: 201 SLVPFVIAGDFNRKINYLGNND------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +    ++ GD N      G               +       +  +  +      N + +
Sbjct: 236 A----ILCGDMNWDDEGDGPFPLPENGGWVDAWAELKPGEDGWTYDTKANAMLTGNRKLQ 291

Query: 255 IPIDYFVMD-QNAYKFLIQ-ESFSEILYNEDDIKSRGKR----------LSDHCPISIDY 302
             +D FV    +     ++      I       + + +R           SDH  + +  
Sbjct: 292 KRLDRFVCKLPDFKVESVEMVGEEAIPRVTYVKEKKARREIRQLVLPVLPSDHFGLVLTI 351

Query: 303 D 303
            
Sbjct: 352 S 352


>gi|167748894|ref|ZP_02421021.1| hypothetical protein ANACAC_03668 [Anaerostipes caccae DSM 14662]
 gi|317470264|ref|ZP_07929658.1| endonuclease/Exonuclease/phosphatase [Anaerostipes sp. 3_2_56FAA]
 gi|167651864|gb|EDR95993.1| hypothetical protein ANACAC_03668 [Anaerostipes caccae DSM 14662]
 gi|316902237|gb|EFV24157.1| endonuclease/Exonuclease/phosphatase [Anaerostipes sp. 3_2_56FAA]
          Length = 349

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 77/307 (25%), Gaps = 49/307 (15%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
               +VS N                G  +  +S  +   +   +    K   AD  FLQE
Sbjct: 55  DPFTVVSLNTGYAGLGEDEDFFMDGGTKVRPDSKAQVEENLAGIAGILKEHRADTYFLQE 114

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +   +  +    +  +                   +   A A       +      LL  
Sbjct: 115 VDLDSKRSYSTDQKKYYETMLGL------GGMFAYNFKVAYAP-YPWPTIGHVESGLLTL 167

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD---------SLENTYSPSCSLL 184
            D+      R A+        K   +    LK+   +          +L      S    
Sbjct: 168 TDARINQAERIALPESFSWPLKTCNLKRCLLKTRVPVKGSRAELVLINLHLEAYDSGEGK 227

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFN------RKINYLGNNDDFWKTIDPN---DSLI 235
             Q++ L   + ++ +     +  GDFN       K       D     I          
Sbjct: 228 EAQSKMLLKVLEEEYKKGNYVIAGGDFNQTFEGITKYPIRSKEDWTPGAIGNEILPAGFQ 287

Query: 236 RFPKEKDSRCN----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               +    C     A +       ID F++  N     ++    +  Y           
Sbjct: 288 FAIDDSYPTCRLLNKAYEKDSQVYVIDGFIVSPNVQVEQVKVMNHDFRYT---------- 337

Query: 292 LSDHCPI 298
             DH P+
Sbjct: 338 --DHQPV 342


>gi|293376599|ref|ZP_06622827.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
 gi|325839419|ref|ZP_08166858.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
 gi|292644825|gb|EFF62907.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
 gi|325490539|gb|EGC92855.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
          Length = 262

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 81/268 (30%), Gaps = 40/268 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYS--------TERLIN 100
                L Q  K    D++ LQE+    + N   KV   N   +  S          + I 
Sbjct: 18  EKIKYLAQVIKEKQYDVIALQEVSQLINPNDENKVKADNYAVVLLSELMKLGITDYQFIW 77

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                  +     +A+  +       S+ +  A D       RR V +    N + + V 
Sbjct: 78  DFSHIGFDVYEEGLAILTRYHIERAHSFVVTQANDVT-NYRTRRIVAIDFISNNQPVSVY 136

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             HL  F   +             + Q   L   +          ++ GDFN   N  G 
Sbjct: 137 SCHLGWFHDTEEP----------FTGQVDELVSRLN----KERLNIVVGDFNNDANLSGE 182

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275
             D+  +    D+     K+ +    A K    +       ID  + D+           
Sbjct: 183 GYDYLLSKGLLDTYHLALKKDEGTTVAGKIDGWEENKKGLRIDLVLSDK---------PV 233

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +  +     S    +SDH  + ++ +
Sbjct: 234 NVLSSHVIFNGSHKDIVSDHFGVEVELN 261


>gi|241745915|ref|XP_002405543.1| ap endonuclease, putative [Ixodes scapularis]
 gi|215505857|gb|EEC15351.1| ap endonuclease, putative [Ixodes scapularis]
          Length = 507

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 78/322 (24%), Gaps = 73/322 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           ++LVSWNIN L   +                  ++     LDADI+  QE  +   V   
Sbjct: 1   MKLVSWNINGLRSFKAG----------------VKGLLAELDADIICFQETKATRDVLEE 44

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFS- 138
                  +  F+S       +S   +         A  +    +   S            
Sbjct: 45  TSAIVEGYSAFFSFPRYQSGYSGVATFCKDAFRPFAAEEGLTELWTSSGCPDSVGFYGDT 104

Query: 139 -----------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                          R  + L     G K+  + +        D  +        +    
Sbjct: 105 SDFDSKNISSVDGEGRTVLTLHHVRCGDKLKRIAVINVYCPRADPEKPER---GQIKLDF 161

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDPND- 232
            + LK        + +  +I GD N                 +         + ++ +  
Sbjct: 162 YELLKRRAMTLLRNGLEVIILGDLNTSHRKIDHCDPSDDEDFDSNPGRIWLSQFLENSTT 221

Query: 233 ---SLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
                  + +   +   A                  IDY +       FL        + 
Sbjct: 222 NTCFHDTYRRLHPTTEKAFTCWNTRLGARQTNYGTRIDYVLCSPALVPFLQTADILPHVL 281

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                       SDHCP+   +
Sbjct: 282 -----------GSDHCPVEAIF 292


>gi|321252855|ref|XP_003192543.1| hypothetical protein CGB_C0600C [Cryptococcus gattii WM276]
 gi|317459012|gb|ADV20756.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 352

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/329 (12%), Positives = 85/329 (25%), Gaps = 49/329 (14%)

Query: 22  QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYN 78
           +++ + + N+                + K  +   + L     +    DI+  QE+    
Sbjct: 20  EQIHIATVNVRNGHQWSPPADPKNVFAEKPWSERKSRLVDALLSTGPLDILGCQEVFHDQ 79

Query: 79  --AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              + K+  + T+    S           S    +       +   +     P +     
Sbjct: 80  LEDLQKLLGE-TYSHVGSGRDDGKQGGEYSPIFFNRTKFELVRWSTMWLSPTPNVPGSKG 138

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  A  R A  L +    +      +H  +  +        + S  L+          + 
Sbjct: 139 WDAALPRIATLLTLRYKDEDKGGELVHAVNTHYDHLGVRARAESSLLIRSAIWHWVHDVE 198

Query: 197 QKKESL--VPFVIAGDFNRKINYLGNN------------------DDFWKTIDPNDSLIR 236
           QK++     P V  GDFN   +  G                    D F   +  + S   
Sbjct: 199 QKEKPPVAAPVVFFGDFNSPSHEDGYKNITSLHPLPSGQPSFTFLDSFTNLLTTSSSSSP 258

Query: 237 FPKEKDSRCNANKNL-----------RNKIPIDYFVMDQNAYK------------FLIQE 273
                  +                  RN   ID+ ++                  + I  
Sbjct: 259 SSPIIPLQTRPYGPHLTYTDFAPPGARNATRIDFVMLGAEVDDDDPAKRGKARGGWTIVR 318

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 + E D +    R SDH  + +  
Sbjct: 319 YACVDNWVEADAEGWNGRWSDHRAVRVTI 347


>gi|320108666|ref|YP_004184256.1| endonuclease/exonuclease/phosphatase [Terriglobus saanensis SP1PR4]
 gi|319927187|gb|ADV84262.1| Endonuclease/exonuclease/phosphatase [Terriglobus saanensis SP1PR4]
          Length = 1261

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/354 (11%), Positives = 91/354 (25%), Gaps = 75/354 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLW------------------------------- 43
           P   + A +  + S+NI         +                                 
Sbjct: 625 PVPTAAATQFTVASFNIERFYNPAQATPDNLYYVPAGVNGYNGSSNTPIVSTGQTFISEA 684

Query: 44  -KNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYNAVAKVFPKNTWCI-----FYST 95
              +          L    +N+    D+V L+E+ + +    +  +          + + 
Sbjct: 685 VDVTTAAYARRLQKLSLAVRNVLNLPDVVTLEEVENQSVANDIANQINTDAGTPGLYAAY 744

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS--------RAGNRRAVE 147
               + +       I     V+   V  L  +    G   +++               + 
Sbjct: 745 STDNSTTYTQDGTGISVGFLVKTTTVDKLAVTQFGQGHTFTYTGGTQPITLNDRPWLVLN 804

Query: 148 LLVEINGK----KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V+         + V+  H+K+    +S  +T +     L  QA+ +  +I Q   +  
Sbjct: 805 AGVKRGDGIKDYPVTVIVNHMKALTGENSTTSTSTRQKKEL--QAEDIAKYI-QSLPAGT 861

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN-----------------DSLIRFPKEKDSRCN 246
             +  GDFN      G  D      + N                             +  
Sbjct: 862 HVISGGDFNAFEFSDGYTDTLATYTNTNVLPANQVVQPGVAGLVTPLTDLALLLPADQRW 921

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHC 296
           +     N   +D+ V+  +        +++ +  +             R SDH 
Sbjct: 922 SYVEYGNAQILDHLVVTPDLVAAGAHMAYAHLNADFPTTAYNDAATPARTSDHD 975


>gi|212274573|ref|NP_001130149.1| hypothetical protein LOC100191243 [Zea mays]
 gi|194688404|gb|ACF78286.1| unknown [Zea mays]
          Length = 323

 Score = 71.1 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 84/306 (27%), Gaps = 68/306 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  ++    ++++SWN+N L          +             +     + D++ LQE 
Sbjct: 58  PPLSTDTNSMKILSWNVNGLQAIVQSGFSAD-------------ELVARENFDVLCLQET 104

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   +F        Y+                ++  AV  +   +  Q    +   
Sbjct: 105 HLEERNVDLFKNLVHEYDYTCWSC------SVARLGYSGTAVISRVQPISVQYGLGIPEH 158

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D   R          + +     ++++ ++ +        N                 D+
Sbjct: 159 DQEGRL---------ITLEFDDFYLVNAYVPNSGRGLRRLNYRINDWDPCF------SDF 203

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPK 239
           I +  E   P ++AGD N     +  +                + ++       L+   +
Sbjct: 204 IKK-LECSKPVIVAGDLNCARQSIDIHNPQAKTEAAGFTIEERESFEVNFSRKGLVDTFR 262

Query: 240 EKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           ++     A                +DYF+  ++    +            D        L
Sbjct: 263 KQHPNAVAYTFWGENQRITNKGWRLDYFLASESIADKVH-----------DSYTLPDVAL 311

Query: 293 SDHCPI 298
           SDH PI
Sbjct: 312 SDHSPI 317


>gi|306842367|ref|ZP_07475024.1| Endonuclease/exonuclease/phosphatase [Brucella sp. BO2]
 gi|306287506|gb|EFM58971.1| Endonuclease/exonuclease/phosphatase [Brucella sp. BO2]
          Length = 285

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 67/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIALQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLREGIVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSALQ--EA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 181 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATAVPSFPSRFPVLALDR 230

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              + I   E       +  SDH PI    D
Sbjct: 231 VL----------GAPDNLITSVEVHNTPLARLASDHLPIKAHLD 264


>gi|170587921|ref|XP_001898722.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
 gi|158592935|gb|EDP31530.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
          Length = 339

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 86/292 (29%), Gaps = 43/292 (14%)

Query: 14  VPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            P +       + ++SWNI+ L E              T  +T +      + AD+VFLQ
Sbjct: 87  FPTSEPNDDFSLTVMSWNIDGLDENN-----------LTIRFTAVCYIISKISADVVFLQ 135

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           EM            +           + +          T + ++     +  ++ P   
Sbjct: 136 EMTPDLVPQVRKNLSGEYSILVATPNLPY---------FTVVLLKPFIELISHKAIPYRR 186

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +         R    +   + G+K+ +L+ HL+S                +   Q Q   
Sbjct: 187 SG------MGRSMQLVETSLRGRKVMLLNTHLESM----------KEHSDIRLTQIQECF 230

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR--CNANKN 250
             + +  +     V  GD N + + +      ++            +        N    
Sbjct: 231 KQLVEWDDGKTVIVFGGDLNARDSEICELPPGFEDAWIAAGSRPKFRFTWDTLLNNNKVT 290

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +   D  +         I       L  ++ I++     SDH  I + +
Sbjct: 291 GKARCRFDRIIY----KSAGIFSGVDFSLEGQNRIRTSLCFPSDHWAILVHF 338


>gi|163802838|ref|ZP_02196727.1| Na(+)-translocating NADH-quinone reductase subunit E [Vibrio sp.
           AND4]
 gi|159173378|gb|EDP58201.1| Na(+)-translocating NADH-quinone reductase subunit E [Vibrio sp.
           AND4]
          Length = 467

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/298 (10%), Positives = 96/298 (32%), Gaps = 31/298 (10%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N+  L     + +   +  +      LL   +   + D++   E+    A   +   
Sbjct: 1   MNYNVYMLDHHTDIFIGGTNPNK---RAQLLADSSVFDNTDVIVFNEVFDNQASDILIEG 57

Query: 87  NTWCIFY-------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            +    Y                  ++       + +  +      ++  + G      +
Sbjct: 58  LSGQFPYRTPVLGRDKNGWDRTEGWNAAKLDDGGVILLSRFPI-EYKAQVIFGEGCGADK 116

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              +  +  ++E  G+   V+  H+++        +  +P   + + Q   +  +I++  
Sbjct: 117 LSQKGFLHAVIEKGGEHYNVIGTHVQA-----DDSSCKTPPSVVRNSQFSQINRYISEVD 171

Query: 200 ES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLR 252
            S    F I+GD N  +          + ++ ++          +    +   +AN    
Sbjct: 172 RSFDEMFFISGDLNV-VKETEEFSSMLEVLNVSEPTNYSGAKYSWDPGINGLAHANYPDL 230

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS------RGKRLSDHCPISIDYDF 304
               +DY +++++  +     +    + ++                SDH P+   +++
Sbjct: 231 KGQLLDYVLVERSHKQPKNWHNQVLDVLSKRVELPGTQEPYYFYEYSDHFPVIA-FEY 287


>gi|86360508|ref|YP_472396.1| putative endonuclease/exonuclease/phosphatase protein [Rhizobium
           etli CFN 42]
 gi|86284610|gb|ABC93669.1| putative endonuclease/exonuclease/phosphatase protein [Rhizobium
           etli CFN 42]
          Length = 271

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 77/284 (27%), Gaps = 54/284 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              A  + + S+N++     +              D     +    + AD++ LQE  + 
Sbjct: 32  PRSAGTL-IASYNVHKCVGTDRRF-----------DPERTSRVIHEIGADVIALQEADTR 79

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                           +    +  +     +  H  + + KK +        L G     
Sbjct: 80  FGERTGILDLGRLERETGLIPVPVAGMAKAHGWHGNVVLFKKGLVHDVHQVKLPGL---- 135

Query: 138 SRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                R A+   +E+  G  + V+  H                     +QQA+ L + I 
Sbjct: 136 ---EPRGALVAEIELEEGGVLRVIAAHFGLLRHN-------------RAQQARTLVELIN 179

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N         +         ++      E      +       + 
Sbjct: 180 N--RHEMPTILLGDLN---------EWRLGDRSSLNTFQSAFGELPPAVPSFPAGLPLLA 228

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +D  + ++             I   E       +  SDH PI  
Sbjct: 229 LDRIIANRKG----------IISEVEAHDTPLARTASDHLPIKA 262


>gi|315607719|ref|ZP_07882712.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccae ATCC 33574]
 gi|315250188|gb|EFU30184.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccae ATCC 33574]
          Length = 350

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/326 (10%), Positives = 78/326 (23%), Gaps = 62/326 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDAD------- 67
           +  +N   L +    +   +              R T+    + +   ++  D       
Sbjct: 29  VGFYNQENLFDTCHDAGKNDYDFLPNGSYHWDAMRYTNKLKNMARALADMGTDKEPLRNT 88

Query: 68  ---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
              ++ L E+ +  A+  +  +       +      H +      +  A+        V 
Sbjct: 89  GCAVIGLSEVENSRALDDLVAQPQ---LRARGYKYVHVEGPDRRGVDCALLYNPALFTVE 145

Query: 125 -QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
             +  P +      S    R  + +   +  + +  +  H  S         +      +
Sbjct: 146 TVKLVPYVQELAKDSAYKTRGFLTVTGRMADEHVAFIVCHWPSRFSGPFYRESAGRQTRV 205

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------PNDSLIRF 237
           +      L        +S     + GD N         +      +             +
Sbjct: 206 VKDSLLRL--------DSECKIFVMGDMNDDPVNKSMTEALGAKAEISEVGEGEMYNPWY 257

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------- 290
                          +    D  VM  N       + FS + + ++ I  R         
Sbjct: 258 NLLAKQGIGTLSYRGSWNLFDQIVMTPNLLNPKGSKDFSTLKFWQNQIVRRDYLLQQEGP 317

Query: 291 ----------------RLSDHCPISI 300
                             SDH P+ +
Sbjct: 318 YKGSPKRTTAGGVWLNGYSDHLPVVV 343


>gi|188993425|ref|YP_001905435.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167735185|emb|CAP53397.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris]
          Length = 296

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 87/313 (27%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +               ++    DAD++ +QE  +     ++
Sbjct: 31  MRIISFNANGLRSAASKGFF---------------EWFATQDADVLCIQETKAQE--HQL 73

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    Y         +  S    ++ +A+  K      ++       D   R    
Sbjct: 74  AGPEFLPAGYKAWF-----RDASTKKGYSGVAIYAKREPDEVRTALGWPEFDEEGRY--- 125

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  +           Q  +WL+  +++   S  
Sbjct: 126 ------IEARFGNLSVVSFYIPSGSSGELRQGYK-------FQVMEWLRPILSEWLASGR 172

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDS-----------LIRFPKEKDSRCNA----- 247
            +V+ GD+N   + L   +      +                    +   S         
Sbjct: 173 QYVLCGDWNIVRSALDIKNWKSNQKNSGCLPPERDWLNGLCADLLDEADASNGRGWVDSY 232

Query: 248 ---------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       +   S             R 
Sbjct: 233 RVLHPQGEDYTWWSNRGAARANNVGWRIDYQLVTPGLRDKVQACSI-----------YRE 281

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 282 QRFSDHAPYIVDY 294


>gi|158312926|ref|YP_001505434.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
 gi|158108331|gb|ABW10528.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
          Length = 314

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 71/286 (24%), Gaps = 60/286 (20%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
               + ++R++S N+   + + G                 L +  +  D D++ L E   
Sbjct: 86  VPQGSARLRVMSANLLYSNTEAG----------------RLGRQIEAADPDVLVLVE--- 126

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 + P     +  S              D     AV  +             A + 
Sbjct: 127 ------LSPLTLADVQASGALKEYRYSEVHPQDGAFGAAVFSRFP------LSDTAAPEV 174

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 R  V +    +     V  I   S                    Q   L++ + 
Sbjct: 175 AGSMSLRTTVRVDERRSFVMYAVHTISPTSG-----------DYAKRWRAQLDHLREDVE 223

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               S +P V+AGDFN   ++          +     ++                   + 
Sbjct: 224 T---SKLPVVLAGDFNATRDHRPLRRLLSAGVRDAHDVLGAGWTPTWNAKTVAFP-PVLR 279

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID+ +                  Y            SDH P++ D 
Sbjct: 280 IDHVLASPAFA---------VTGYQVGSEFD-----SDHKPVTADL 311


>gi|87308507|ref|ZP_01090647.1| deoxyribonuclease gamma (precursor) [Blastopirellula marina DSM
           3645]
 gi|87288599|gb|EAQ80493.1| deoxyribonuclease gamma (precursor) [Blastopirellula marina DSM
           3645]
          Length = 392

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/291 (9%), Positives = 72/291 (24%), Gaps = 47/291 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYN 78
            + +R+ S+NI              S          L Q  +    D++ +QE+     +
Sbjct: 123 GETIRIASFNIQVFGR---------SKADKPHVMARLAQIVRQY--DVMAIQEIRSLDQS 171

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +   +      +    +     R  + + +   A       +      L    D   
Sbjct: 172 ILPEFIDQINAAGRHYDYVIGPRLGRSDSKEQY---AYIYDTASIELDRTQLYTIDDP-G 227

Query: 139 RAGNRRAVELLVEINGK------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            A +R  +     + G          +++IH       D +                 + 
Sbjct: 228 DALHREPLVAWFRVRGPNPEQAFTFTLVNIHTDPDEVKDEINV------------MDDVL 275

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             +          ++ GDFN          +  +                +         
Sbjct: 276 RAVRGDGRGEDDVILLGDFNTD------ERNLGEFGSLTGLSPAVTGMMTNTRGTASYDN 329

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +          +F  +    + +   +        +SDH P+  ++ 
Sbjct: 330 LYFTL------PATSEFTGRGGVHDYVREFNLSIDEALEISDHMPVWGEFS 374


>gi|227891490|ref|ZP_04009295.1| exodeoxyribonuclease III [Lactobacillus salivarius ATCC 11741]
 gi|227866637|gb|EEJ74058.1| exodeoxyribonuclease III [Lactobacillus salivarius ATCC 11741]
          Length = 275

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+         +   R      +L       + DI+ +QE          
Sbjct: 1   MKLISWNIDSLNA-----ALTSDSARAKQSREVLATIIDE-NPDIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +    +   S ++     +       KN      SYP + A +     G  
Sbjct: 55  KHQTILAEQFPDYEITWRSSQEPARKGYAGTMFLYKNNLNPTVSYPEIDAPEPMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L            
Sbjct: 114 -----IITLEFDNFYVTQVYTPNAGDGLRRLAERQVWDEKYADYLVSLDQ--------NK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F        +  
Sbjct: 161 PLLSSGDFNVAHKEIDLAHPGNNHHSAGFTDEERAGFTNLLNKGFTDTFRYVHGDVKDVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +++    +                DH PI
Sbjct: 221 SWWAQRSRTSKINNSGWRIDYWLASNRIADKIVRSEMLDSGERR-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIN 274


>gi|145339643|ref|NP_191417.2| hydrolase [Arabidopsis thaliana]
 gi|215275269|sp|Q9M2F8|CCR4B_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 2;
           Short=CCR4 homolog 2
 gi|332646280|gb|AEE79801.1| carbon catabolite repressor protein 4-like 2 [Arabidopsis thaliana]
          Length = 603

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/348 (14%), Positives = 91/348 (26%), Gaps = 65/348 (18%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            A    ++S+NI  +T +  +  S               L +      AD+V LQE+ S 
Sbjct: 247 SAGSFTVLSYNILSDTSASSDLYSYCPPWALSWPYRRQNLLREIVGYRADVVCLQEVQSD 306

Query: 78  NAVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +      P+   + +   Y  +     S   S  D       R +   V +       A 
Sbjct: 307 HFHEIFAPELDKHGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSHVKKYDVEFNKAA 366

Query: 135 DSFSR-----AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT-----------YS 178
            S +      A  R A+  LV+ N   I VL+    +     S +               
Sbjct: 367 QSLTDALIPQAQKRTALNRLVKDNIALIVVLEAKFGNQPTDPSGKRQLICVANTHVNVQQ 426

Query: 179 PSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
               +   Q   L   + +    + +P ++ GDFN       +       +DP    +  
Sbjct: 427 DLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTLPGSAPHTLLVMGKVDPMHPDLAV 486

Query: 238 PK------------------------------------------EKDSRCNANKNLRNKI 255
                                                         +     N       
Sbjct: 487 DPLNILRPHTKLTHQLPLVSAYSSFVRKGIMGLGLEQHRRRIDLNTNEPLFTNCTRDFIG 546

Query: 256 PIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             DY     +      + E   E    +D      +  S+H  +  ++
Sbjct: 547 THDYIFYTADTLMVESLLELLDEDGLRKDTALPSPEWSSNHIALLAEF 594


>gi|299743291|ref|XP_001835660.2| endonuclease/exonuclease/phosphatase [Coprinopsis cinerea
           okayama7#130]
 gi|298405590|gb|EAU86231.2| endonuclease/exonuclease/phosphatase [Coprinopsis cinerea
           okayama7#130]
          Length = 617

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 103/322 (31%), Gaps = 67/322 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA-- 79
           +    +N+  L+               +     + ++  +     D +FLQE+   +   
Sbjct: 307 ITFGDYNVENLAPN-------------SRHLPTIAKHIVDYLRTPDFLFLQEIQDDSGPT 353

Query: 80  ----------VAKVFPKNT-----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
                     +A +             F   + +          +I TA   + + ++++
Sbjct: 354 DDGTVSANLTLATLANAIRDLSGVRYSFAQVDPVDGQDGGQPGGNIRTAFMFKPEVLKLV 413

Query: 125 QQS----------------------YPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLD 161
             S                       P             R+ +    E + G++++ ++
Sbjct: 414 NGSPVGGSRDPVAVEGRRGKPKLNFNPGRIEPAGAVWNATRKPLVAHWETSFGQELFTVN 473

Query: 162 IHLKSFCFLDSLENTYSPSC----SLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKI 215
           +HL S     S +    P         + Q   + +++     ++S    V+AGDFN  I
Sbjct: 474 LHLSSKGGSSSTQGDARPPVNNPIESRTAQVSSVANFVKAVLDRDSNANIVVAGDFNEFI 533

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
           +         + +   D   R P+E+     +    +N   +D+ ++  +  +  ++   
Sbjct: 534 HTRSVYKPIVQHLTDIDEAARIPQEER---YSYLFDQNAQQLDHALVSSSIRRRKVEFEH 590

Query: 276 SEILYNEDDIKSRGKRLSDHCP 297
             I        S  +R+SDH P
Sbjct: 591 IHINT---WAPSLSERISDHDP 609


>gi|254457926|ref|ZP_05071353.1| exodeoxyribonuclease III [Campylobacterales bacterium GD 1]
 gi|207085319|gb|EDZ62604.1| exodeoxyribonuclease III [Campylobacterales bacterium GD 1]
          Length = 249

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 80/279 (28%), Gaps = 61/279 (21%)

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
           R  ++   L ++      DI+ LQE+    A+    PK+ +   Y    + +        
Sbjct: 7   RAVANKEAL-KWIDERQPDILCLQEI---KALEDQIPKDMFEKEYQDIIVNSAI-----K 57

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
             ++           + Q+       D  +    R      VE +   I + +++  +  
Sbjct: 58  KGYSGTMTWS-----ILQNSYNSTCLDIDTMGEGRI-----VETHYDDIVLFNVYFPNGQ 107

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------- 217
             +          +   +      D+  + +E+    +I GD N                
Sbjct: 108 KDEER-------LAYKMKFYDDFLDYCEKLRENGKSIIICGDVNTAHKEIDLKNPKANSK 160

Query: 218 ----LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQ 264
               L    ++   +  +  +  F        +       +           IDYF + +
Sbjct: 161 TSGFLPIEREWMDKLVNHGYIDTFRYVNGDEIDRYSWWSYRSGARLKNVGWRIDYFFISE 220

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  + L      + +             SDHCP+ I   
Sbjct: 221 DLAENLEDAFILDYI-----------EGSDHCPVGIKLS 248


>gi|326430099|gb|EGD75669.1| hypothetical protein PTSG_07788 [Salpingoeca sp. ATCC 50818]
          Length = 709

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 91/324 (28%), Gaps = 62/324 (19%)

Query: 9   LVFFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           L + + P  +   +        +RLVSWNIN  +  + +                +++  
Sbjct: 412 LFWTIPPSPSPATETRPVQRDFLRLVSWNINGFTPHDELLPG---------RLAKMQEEL 462

Query: 62  KNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             LDAD+V LQE    +   +  +  +  +    +        K               +
Sbjct: 463 SGLDADVVLLQEAERQNLQLLHTLMEEIGFVPCDAPPLATLSPKHCVPEHFTATFMRESR 522

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
              + Q+  P   ++             L     G K+WV ++H +S             
Sbjct: 523 FELLAQERMPFQSSQRGRDLNTC----ILRCTATGNKVWVGNVHFESMGT---------A 569

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK----------------INYLGNNDD 223
           S +   Q A+ L +            V+AGD N +                        D
Sbjct: 570 SEARCEQFAESLVEM-----SQHEHSVLAGDTNLRDEEGDDGCSAFNKQMLPGSRSIVQD 624

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEI-LY 280
            W+                +      +     +   D   +       L    F  I  +
Sbjct: 625 AWELSGSPRQYRFTWDTLLNDRVDTTSWGGRPRARFDRCFVKG-----LTASDFRLIGTH 679

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
              D+      +SDH  I +D  +
Sbjct: 680 KSPDVLVGL--VSDHFGICVDLHW 701



 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 84/285 (29%), Gaps = 30/285 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              ++R++SWNIN             S +R   DY  L+     L +D+V LQE+     
Sbjct: 75  QDHELRVLSWNIN---------APSKSRQRLPKDYDTLQGQVTTLRSDVVMLQEVVERQ- 124

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF-- 137
           +A +        F    R        S + I  ++        V ++   L+  K +   
Sbjct: 125 LADLVKVMQDAGF---SRCGGVPLVYSGDSIAPSVPPHFTLTFVRKKRLQLVAHKRAPFT 181

Query: 138 SRAGNRRAVELLVEIN--GKKIWVLDIHL-KSFCFLDSLENTYSPSCSLL-SQQAQWLKD 193
           +    R      V     GK++W+ ++HL     +       +  S   L       L  
Sbjct: 182 NSRKARDLNTCTVRCKRTGKEVWLGNVHLETYRKYAGRRCLQFLQSLQALSRHDLGILAG 241

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            +  ++      +           +G   D W+ +            + +   ++     
Sbjct: 242 DMNLREAEAQRVLQQCRGAAPYTSIG---DAWEMVGSPKEQEFTWDLQLNTSWSHFPNNP 298

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +I  D   +                        +     SDH  I
Sbjct: 299 RIRFDRCYV--------KGLRARSFELVGTRALTHFGHFSDHFGI 335


>gi|74004148|ref|XP_535904.2| PREDICTED: similar to TRAF and TNF receptor-associated protein
           [Canis familiaris]
          Length = 353

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 83/288 (28%), Gaps = 50/288 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
              ++WN++ L                      +  Y      D+VFLQE+         
Sbjct: 105 FSFITWNVDGLDLNN-----------LQERARGVCSYLTLYSPDVVFLQEV--------- 144

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +C +                   TAI ++K  V+   Q                R
Sbjct: 145 --IPPYCSYLKKRAHSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNT-----KMMR 197

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I+G ++ ++  HL+S                    Q + +   + +      
Sbjct: 198 NLLCVYASISGNELCLMTSHLEST----------RGHAKERMNQLKMVLKKMQE-APESA 246

Query: 204 PFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             + AGD N + +          N  D W+ +       ++  +     N   +   K+ 
Sbjct: 247 TVIFAGDTNLRDHEVTKCGGLPSNILDVWEFL-GKPKHCQYTWDTQMNSNLGISATCKLR 305

Query: 257 IDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            D       A    ++ +S   +     +    G+  SDH  +  + D
Sbjct: 306 FDRIFFRTAAESGHIVPQSLDLLGL---EKLDCGRFPSDHWGLLCNLD 350


>gi|313206564|ref|YP_004045741.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
 gi|312445880|gb|ADQ82235.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
 gi|325335988|gb|ADZ12262.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer
           RA-GD]
          Length = 326

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 88/287 (30%), Gaps = 56/287 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A   ++VS+NI                K   +    +  + ++   DI+ +QE G +   
Sbjct: 93  ASDFKVVSFNI----------------KAAEAGIANIDHHLESFSPDIILIQEKGDFKEE 136

Query: 81  AKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +  P         FYS   +I   +   + D   A  +  +      +   +       
Sbjct: 137 IESMPYRKEIDILEFYSKTPIIESGRILIDADNGYASYIDTEIKGKRIRFINVYLKPFEL 196

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           ++   + +  L V     K               SL   + P       Q + ++  +  
Sbjct: 197 NKDMVKPSTNLTVSEEKAK---------------SLIARFLPVFKAHQTQVEQIRLAV-- 239

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            ++S  P ++ GDFN   N           +  N +       K        + +  I I
Sbjct: 240 -EKSPYPVILGGDFNAVPNSYEYY-----YLSQNMTDSFLEVGKGLGT-TFHDYKFPIRI 292

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           DY    +                       R ++LSDHCPI  ++ +
Sbjct: 293 DYLFSTKEIKP-------------VSLDTDRSRQLSDHCPIIGEFKY 326


>gi|312865557|ref|ZP_07725784.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           downei F0415]
 gi|311099075|gb|EFQ57292.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           downei F0415]
          Length = 263

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 76/273 (27%), Gaps = 47/273 (17%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF------------YSTERL 98
                 L       D D++ LQE+    A   V  +     +             +    
Sbjct: 17  EQKLEYLADTIAAKDYDLIALQEVNQTIAAPIVDGEIRKDNYGQVLLELLKQRGVNDYSY 76

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
              +     +     +A+  +   +  + +    ++D      +R+ V L V++ G+ + 
Sbjct: 77  HWSTSHIGYDIYDEGLALLSRYPVLESEGFYTSKSQDI-HTIDSRKIVRLKVDVQGQALE 135

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           V   H+                      Q   L+  +       +  +  GDFN      
Sbjct: 136 VYSCHMNLPTSQTE-------------SQVDNLQRLVGHTDFEGLK-IFMGDFN---TDA 178

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCN--------ANKNLRNKIPIDYFVMDQNAYKFL 270
             N   ++TI     L  +   ++              K       +DY  +++      
Sbjct: 179 LGNPQAYQTILDQGLLDTYQMAQEKDSGVTVCKSIDGWKGQSQDKRLDYVFVNRELPVKS 238

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +  F+             + +SDH  + +   
Sbjct: 239 SRVIFN---------GQNQEVVSDHFGLEVALS 262


>gi|203287972|ref|YP_002222987.1| exodeoxyribonuclease III [Borrelia recurrentis A1]
 gi|201085192|gb|ACH94766.1| exodeoxyribonuclease III [Borrelia recurrentis A1]
          Length = 254

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 76/304 (25%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + L+SWN+N +                         +      DI+ LQE  +       
Sbjct: 2   MNLISWNVNGIRAVSNKGF---------------LNFIAEYSPDILCLQETKALKEQLPR 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +  ++S           S    ++ +A+  K   +      L           
Sbjct: 47  ELIDIEGYYSYFSK----------SIIKGYSGVAIYSKIEPI-----KLENMNIEIFDRE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +      +     +++ +  +   L    N            A            S
Sbjct: 92  GRCIIA-----HYHDFILINAYFPNSQSLRKRLNYKLEFLMSFESIA-------NSFVTS 139

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GDFN     +                   +     ++           K+   
Sbjct: 140 GKNLIVCGDFNIAHTEIDLSNPKTSRESAGFYVEETNWMDNFLNRGYVDTFRMFNKEPGN 199

Query: 246 NANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               + + +         IDYFV+++     +        +             SDHCP+
Sbjct: 200 YTWWDYKTRARERNVGWRIDYFVINKAFQFKVKDALILNKV-----------MGSDHCPV 248

Query: 299 SIDY 302
            +  
Sbjct: 249 FLKL 252


>gi|308464812|ref|XP_003094670.1| hypothetical protein CRE_25821 [Caenorhabditis remanei]
 gi|308247067|gb|EFO91019.1| hypothetical protein CRE_25821 [Caenorhabditis remanei]
          Length = 445

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 84/328 (25%), Gaps = 56/328 (17%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F  +       +++R+V+ N   L +      W           + + +Y      DIV 
Sbjct: 31  FAALRRNNVAPRQLRVVTLNAWCLPQP-----WPIGSTDRVHRLSKIGEYMIEELYDIVG 85

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ SY+   K+  +       S+     H            +  R   V  L   Y L
Sbjct: 86  LQELWSYHDFVKLSEQC------SSVYPYFHYFHSGFTGSGVCVFSRHPIVSTLTSRYSL 139

Query: 131 LGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            G      R        + +         ++     HL +       +          + 
Sbjct: 140 NGFAHHIHRGDWFGGKVVGLTEVEIDGDLRVNFYTTHLHA-----EYDRENDLYLPHRTS 194

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------------- 224
           Q+  L  ++     S    ++ GD N +   LG                           
Sbjct: 195 QSFELAQFVRHTSRSADVVIVTGDLNMEPCDLGFRMILSHAKLFDAWRMSHEVENDEADG 254

Query: 225 WKTIDPNDSLIRFPKEKDSRCNA--------NKNLRNKIPIDYFVM-DQNAYKFLIQESF 275
            + +           ++   C          +        IDY +         L +   
Sbjct: 255 GELLKYRGIAKGGTCDRPDNCYTKRALKLAVSAKKDESKRIDYILFKSGRCNVKLEECEI 314

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +      + I       SDH  +   + 
Sbjct: 315 TL-----NQIPGEQMNYSDHVGLRARFT 337


>gi|258540959|ref|YP_003175458.1| metal-dependent hydrolase [Lactobacillus rhamnosus Lc 705]
 gi|257152635|emb|CAR91607.1| Metal-dependent hydrolase [Lactobacillus rhamnosus Lc 705]
          Length = 355

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 85/324 (26%), Gaps = 65/324 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            Q    +++NI               G      S +        + +  +    DI F Q
Sbjct: 52  GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRAYSQQAVRKSINGVIKTTQAQQPDIAFYQ 111

Query: 73  EMGSYNAVAKVFPKNTW-----------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           E+      ++   +                       + +          + I    K  
Sbjct: 112 EIDPDGDRSRHVNEVEMVTNAQRQYANVYGQNYDSAYLFYPFNQPIGKAKSGILTLSKAK 171

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP 179
               + Y L    D        RA         NGK+  +++IH+ +F            
Sbjct: 172 VDSARRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFIMVNIHMSAFTP---------- 221

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +  +   Q   L  +I    +     ++AGD+N ++          K +D   + +    
Sbjct: 222 NVKIQQAQFAKLFKYINHAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPKS 281

Query: 240 EKDSRCN--------------------ANKNLRNKIPID-YFVMDQNAYKFLIQESFSEI 278
           +  +                                 ID Y +   N    +  ES   +
Sbjct: 282 KLPAGFYIPTMGLAAAKVPSVRALDQPYKPGKSFVTLIDGYIL-SPN----IKAESVHVV 336

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
                     G + SDH P+ + +
Sbjct: 337 ST--------GFQYSDHNPVVLKF 352


>gi|187607433|ref|NP_001120209.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [Xenopus (Silurana) tropicalis]
 gi|166796474|gb|AAI59354.1| LOC100145256 protein [Xenopus (Silurana) tropicalis]
          Length = 395

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 74/273 (27%), Gaps = 34/273 (12%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
            K+      L+ Q       D+  LQE+ S    +++  + +         +  ++ R  
Sbjct: 23  SKKRKERLALIGQLLSQQCYDLALLQEIWSDKDYSELRHRLS--------DVFPYTHRFK 74

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           +  I + + V  +   +    Y           +       +    + ++  G    V  
Sbjct: 75  SGVIGSGLCVFSQFPIIDCLQYQFSLNGFPYMMNHGDWFCGKAVGLVKLKAYGFLCHVYV 134

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            HL +    ++              Q+  L  +I     +    V+AGD N     LG  
Sbjct: 135 THLHAEYCRENDCYRS-----HRILQSWELAQFIRHTSNNSDVVVLAGDLNMHPGDLGVK 189

Query: 222 DDF-WKTIDPNDSLIRFPKEKDSRC-----NANKNL----RNKI--PIDYFVMDQNAYKF 269
               W  +  +       +     C     N   +            IDY +        
Sbjct: 190 LVREWTGLKDSYLECTEYEGPPDGCTLIPSNPFTDPQELKNFPQGIRIDYIMYKSAPGIA 249

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +      + +             SDH  ++   
Sbjct: 250 VS----CQQVTTGSQSSRSDTPFSDHEIVTATL 278


>gi|42519716|ref|NP_965646.1| exodeoxyribonuclease A [Lactobacillus johnsonii NCC 533]
 gi|41584005|gb|AAS09612.1| exodeoxyribonuclease A [Lactobacillus johnsonii NCC 533]
          Length = 261

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 70/305 (22%), Gaps = 80/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                            +LDADI  +Q+        K+
Sbjct: 8   MKFMSWNVNGLRAALRHGF---------------VNTFTDLDADIFGIQDTRVEPNEVKI 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      ++                     +   + +             
Sbjct: 53  -DLPGYYQYWNYAERKGYAGTAVFTKEK---------PITVANGFGVPEVDGEGR----- 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     + +++ +          +               L  +         
Sbjct: 98  -----SITLEFSNFYFINVQVPFSGEKLQRLDFRELWAQTFRNYVTKLMQY--------K 144

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD +                +  + G     +  +     +  F           
Sbjct: 145 PVIIGGDMSVAHERIDLAEPDDNHHRPGFTGIERKEFSELLNAGFIDTFRYFHPDEAK-Y 203

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +DYF++  N    L                      SDHCPI
Sbjct: 204 TYWSYRDKEARAENLGWRLDYFLVSNNLEDRLTNAKIL-----------SNIMGSDHCPI 252

Query: 299 SIDYD 303
            +D D
Sbjct: 253 ELDVD 257


>gi|294085378|ref|YP_003552138.1| exodeoxyribonuclease III Xth [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664953|gb|ADE40054.1| exodeoxyribonuclease III Xth [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 259

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 72/305 (23%), Gaps = 72/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                       L++Q+    D D++ LQE  +     K 
Sbjct: 1   MKIATWNIN----------------SVRLRRDLVKQFLDESDVDVLCLQETKTE---DKS 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP + +       +             +  +A+  +            G +D        
Sbjct: 42  FPVDFFAEAGWGHQ------AIRGEKSYNGVAILSRTPLADIAHINWAGKQDCRH----- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +    +    +           +  +        L+  A+    ++  + E+  
Sbjct: 91  ------ISARTESGVTIHNFYVPAGGDVADPDENPKFAHKLTFLAEMTAHFVKNRPENA- 143

Query: 204 PFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             V+ GD N                   +     D     +                   
Sbjct: 144 --VLVGDLNIAPLAEDVWSTKQLLKVVSHTPVETDGLKALMAKGSWHDPVRAHFGDDEQI 201

Query: 248 NKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +            +D+  +  +    + +                 ++ SDH P
Sbjct: 202 YSWWSYRSRDWQVNNRGRRLDHIWVSTDLANAVSKAEILTDY-------RNAEKPSDHVP 254

Query: 298 ISIDY 302
             I  
Sbjct: 255 TIITL 259


>gi|229821466|ref|YP_002882992.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333]
 gi|229567379|gb|ACQ81230.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333]
          Length = 269

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 81/304 (26%), Gaps = 64/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + + N+N +                 +    + ++    + D++ LQE+ + +     
Sbjct: 5   LSVATVNVNGIRA---------------AYRRGMGEWLAKREPDVLLLQELRAPDETVHQ 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W I ++           S+      +AV  +      +     G  D     G R
Sbjct: 50  LLGEGWHIAHA----------ASDAKGRAGVAVASRLPVTAVRIGLGDGVTDEAIDTG-R 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +    G  +    ++L S            PS +      + +   +        
Sbjct: 99  WIEADVQLPAGDTVTTASLYLHSATVGT-------PSLAAKYAYLERVTTRMGDLASRGG 151

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+AGD N     L   +                +      +  +     +        
Sbjct: 152 FAVVAGDVNVAHRELDIRNWKGNLRSAGFLPEERGYLDRWFADGWVDVARAQAGEVDGPY 211

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY +   +     +           D   S  +R SDH P++
Sbjct: 212 TWWSWRGKAFDNDAGWRIDYQIATSDLAARAV-------EAVVDRASSYAERFSDHAPLA 264

Query: 300 IDYD 303
           + YD
Sbjct: 265 VAYD 268


>gi|209881833|ref|XP_002142354.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
 gi|209557960|gb|EEA08005.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
          Length = 750

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/391 (11%), Positives = 86/391 (21%), Gaps = 103/391 (26%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           + +   + +++SWNI     + QE        +   T   T +     +   DIV LQE+
Sbjct: 358 SLASNSRFKVLSWNILAEIYASQEAFPHCDAYMLSWTYRKTRIIVEILSHQPDIVCLQEV 417

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----------------TAIAVRK 118
            + +      P      +    +        S +                        R+
Sbjct: 418 QTEHFDDFFKPILQQYGYEGMYKQKTTEIFTSGSGRRKDGKYTMDGCATFYKTNKFIARE 477

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS------ 172
                          +   +   N  A    +  +   + +L  + +S     S      
Sbjct: 478 NYSLEFSALIKEATHRTLPAEVKNNPAAIKRLLKDNVAVVILLEYRQSDGNNGSCLNSDN 537

Query: 173 -------------------------LENTYSPSCSLLSQQAQWLKDWITQKKESLVP--- 204
                                           +  +   QAQ L   + +          
Sbjct: 538 NNGKNSGNSCVSSNSTPLQVIIANTHIVANPEANDVKIWQAQTLVSVLEEYLHDCYRRQP 597

Query: 205 ----FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK--------------------- 239
                +I GDFN   +          T D N   +   +                     
Sbjct: 598 VLPGLIICGDFNSTPDSALYRLLATGTCDRNHKDLAMDRHGLLADLPLGHSMRLRSAYSM 657

Query: 240 -----------------EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                            E       N        +DY        +        +     
Sbjct: 658 ARAVVEGHNPNIIPRSTETLEPLFTNYTPNYLGCLDYVFYTDERLRLGSILELLDEEALI 717

Query: 283 ---------DDIKSRGKRLSDHCPISIDYDF 304
                    D      +R SDH P+  ++++
Sbjct: 718 KEASALQLPDWSLPNPQRPSDHLPLLTEFEW 748


>gi|186474828|ref|YP_001856298.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
 gi|184191287|gb|ACC69252.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
          Length = 259

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 73/303 (24%), Gaps = 75/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +     AD+V +QE+         
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWFGEQKADVVCVQEIKCSQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      + +         A    +     +      +G          R
Sbjct: 43  ---DMTPEFLAPHGFTGYFQHAVKKGYSGAGLYTRHEPDEVV-----IGFGSEEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE     + V+ +++ S    D  +                L            
Sbjct: 95  Y-----VEARFGNLSVISVYVPSGSSGDERQQAKYRFMDEFMPHLAELSR--------ER 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R    
Sbjct: 142 EVIVCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +                 ++          + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGVAATAK----RVDVFR-------DIKFSDHAPVT 250

Query: 300 IDY 302
           +DY
Sbjct: 251 VDY 253


>gi|88799867|ref|ZP_01115440.1| hypothetical protein MED297_03055 [Reinekea sp. MED297]
 gi|88777447|gb|EAR08649.1| hypothetical protein MED297_03055 [Reinekea sp. MED297]
          Length = 840

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/351 (11%), Positives = 84/351 (23%), Gaps = 76/351 (21%)

Query: 21  AQKVRLVSWNINTLS-----EQEGVSLWKNSVKRTTSD----------------YTLLRQ 59
           +  + + S N+  L       +            T +D                   + +
Sbjct: 451 SGNLVIASMNVLNLFNGVEDPEVNGGETFFPADDTEADKYGYRGAYSEDDYLIQRGKIVE 510

Query: 60  YAKNLDADIVFLQEMGSYN------------AVAKVFPKNTWCIFYSTERLINHSKRDSN 107
             K +DAD++ L E+ +              A+    P +   +F + E           
Sbjct: 511 ALKAMDADLIGLMEIENDGFGELSSIQALLTALNAEMPTDQQYVFVNPETDSGKIGT--- 567

Query: 108 NDIHTAIAVRKKN-------VRVLQQSYP-LLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
           + I   +  R          V +   + P        F  + NR ++            V
Sbjct: 568 DAIAVGLLYRPSVLTAKGDAVILDSSNSPTDEDGNALFLDSKNRPSLIQSFTHKNTD-RV 626

Query: 160 LDIHLKSFCFLDSLENTYSP---------SCSLLSQQAQWLKDWITQKKESL--VPFVIA 208
               +       S  +  +                +  Q L  +++    +      V+ 
Sbjct: 627 FTASINHLKSKGSSCDALNDPNLDDGAGNCNKTRERAVQGLMAFLSNDPTNSGSNRLVVM 686

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GD N             K +    +  +  +       +         +DY +       
Sbjct: 687 GDMNAYSKETPIQMFESKGMVNLKATNKATEAHP---FSYSYGGFLGSLDYILGSNAMTS 743

Query: 269 FLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDY 302
            L+      I   E +                         SDH PI   +
Sbjct: 744 DLLSIDAWHINSLEANAFDYDTDLDPYDDNDTYASVDPYYSSDHDPIIASF 794


>gi|326427499|gb|EGD73069.1| hypothetical protein PTSG_04783 [Salpingoeca sp. ATCC 50818]
          Length = 390

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 84/300 (28%), Gaps = 33/300 (11%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +    + +  +N+  N L++    S              LLR     + ADI  L E  
Sbjct: 35  EAQDNSIVVCEFNVLANGLAQHGKFSRCDAEYLTWEHRSPLLRDEIARIRADIFGLAECN 94

Query: 76  S-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   +F +  + + Y   +  + ++R         IAVR+   RV+ +        
Sbjct: 95  EFDTFWEPMFAEEGYDVVYCA-KSKSPAQRFGGTADGCCIAVRRDRFRVVSK-------- 145

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R     AV   +     +  +L                      + S Q + L   
Sbjct: 146 --LQRDDAPVAVAAQLLDITTQQHLLVCMCHLKSG--------RTFGDMRSAQMEMLLAS 195

Query: 195 ITQKK----ESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           I++ +          ++ GDFN   + +         F K             +     +
Sbjct: 196 ISEFEEGLSRPCPTAIMLGDFNAHSDEMCVTMCEEAGFTKVFSDVKHYPWTTWKYRHGPS 255

Query: 247 ANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           A+       K  ID+ +        +   +                  SDH  +++   +
Sbjct: 256 ADPKDEVEQKHTIDHILARPATR-LVSYLALPSDDEVTQGCFPSATFPSDHVSVAVRIAW 314


>gi|126336159|ref|XP_001368141.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 597

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 85/326 (26%), Gaps = 55/326 (16%)

Query: 24  VRLVSWNINTL----SEQEGVSLWKNSVKRT---TSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R V++N+       +E     L+               LL++      AD++ LQE+  
Sbjct: 281 LRAVTYNVLADVYAHTEHSRAVLYPYCAPYALGLDYRLNLLQKELSGYSADVLCLQEVDR 340

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRD---SNNDIHTAIAVRKKNVR-----VLQQSY 128
                 + P           RL  H               +  +                
Sbjct: 341 SVFHDSLAPALDAFGLQGLFRLKQHQHEGLATFFRRDKFRLLAQHDIAYHQALATDPVHG 400

Query: 129 PLLGAKDSFSRAGNRR-----AVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           PLL     + +A +R      A+++ +    +   KKI V + HL               
Sbjct: 401 PLLEQLARYPQARDRVLQRSSALQVSILQSTKDPSKKICVANTHLYWHPRGGH------- 453

Query: 180 SCSLLSQQAQ---WLKDWITQKKESLVPFVIAGDFNRKIN------------YLGNNDDF 224
              +   Q        + +TQ     VP +  GDFN   +               + D  
Sbjct: 454 ---IRLIQMAVALTHLNHVTQDLYPGVPVLFCGDFNSTPSTGMYTFVSTGSVSEDHEDWA 510

Query: 225 WKTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEI 278
               +   ++      +           N        +DY  +D        +    S  
Sbjct: 511 SNGEEERCNMSLSHPFRLKSACGEPAYTNYVGGFHGCLDYIFIDFTALEVEQVIPMPSHE 570

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304
                         SDH  +  D  +
Sbjct: 571 EVTTHQALPSVSHPSDHIALICDLKW 596


>gi|333031154|ref|ZP_08459215.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
 gi|332741751|gb|EGJ72233.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
           18011]
          Length = 303

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 84/346 (24%), Gaps = 90/346 (26%)

Query: 1   MIR--KYVLALVFFLVPCTASVAQ-------------KVRLVSWNINTLSEQEGVSLWKN 45
           M R   ++  L+   +P   S +                +++S+NI    + +       
Sbjct: 1   MKRMINFLFTLLLISIPIGCSSSNNDESNYPPGEIDNTFKVMSYNILNGMKNDNSPNKTT 60

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
                         + K  D DI+ LQE+     +      +             H+   
Sbjct: 61  Y-----------VNWLKAKDIDILALQEINFVEGLPTSTKIDEEAELKKQANRYGHNHVV 109

Query: 106 S--NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                     I +  K                            +  +ING  I      
Sbjct: 110 ILKKPGYKNHIGITSKYPIEDVVKVHEGMDHG-----------YIKAKINGYNIL----- 153

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-- 221
             +                L+  + +         K     +++ GDFN           
Sbjct: 154 --ATHLDPYTYENRQREIQLVLNEIK---------KSGEQNWILLGDFNSVTPLDEEKYL 202

Query: 222 -------DDFWKTIDPNDSLIRFPKEKDSRCNA-----------------NKNLRNK-IP 256
                  D   K  +          + D   +                      +++   
Sbjct: 203 NDGNRYLDWLKKYENDGIHHNLVDGKIDYSIHQAILDFGLKDALYEINPDYSYPKDRAAR 262

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID+  + +N  K  ++    E  +         K++SDH P  I+ 
Sbjct: 263 IDFIYVSENLLKKTVKYQVIEDAFT--------KKVSDHYPHLIEL 300


>gi|329667966|gb|AEB93914.1| exodeoxyribonuclease A [Lactobacillus johnsonii DPC 6026]
          Length = 260

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 71/305 (23%), Gaps = 80/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                            +LDADI  +Q+        K+
Sbjct: 7   MKFMSWNVNGLRAALRHGF---------------VNTFTDLDADIFGIQDTRVEPNEVKI 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++      ++                     +   + +             
Sbjct: 52  -DLPGYYQYWNYAERKGYAGTAVFTKEK---------PITVANGFGVPEVDGEGR----- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     + +++ +          +       +       L  +         
Sbjct: 97  -----SITLEFSNFYFINVQVPFSGEKLQRLDFRELWAQIFRNYVTKLMQY--------K 143

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +I GD +                +  + G     +  +     +  F           
Sbjct: 144 PVIIGGDMSVAHERIDLAEPDDNHHRPGFTGIERKEFSELLNAGFIDTFRYFHPDEAK-Y 202

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +DYF++  N    L                      SDHCPI
Sbjct: 203 TYWSYRDKEARAENLGWRLDYFLVSNNLEDKLTNAKIL-----------NNIMGSDHCPI 251

Query: 299 SIDYD 303
            +D D
Sbjct: 252 ELDVD 256


>gi|260172298|ref|ZP_05758710.1| hypothetical protein BacD2_10572 [Bacteroides sp. D2]
 gi|293370553|ref|ZP_06617105.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292634287|gb|EFF52824.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 336

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 87/334 (26%), Gaps = 54/334 (16%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDY 54
           VLAL   +            +  +N+  L +        +           +  +  +  
Sbjct: 5   VLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQWNTMKYKAKL 64

Query: 55  TLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
             + +    L  D       I+ + E+ +Y  +  +  +              H + +  
Sbjct: 65  KNMSEILSLLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQYVHYEGEDQ 121

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
             +  A     K   +      +     + +    R  +     I G+K+  +  H  S 
Sbjct: 122 RGVDCAFFYNPKLFELTNSKL-VPYVYINDTIHKTRGFLIASGNIAGEKMHFIVNHWPSR 180

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                     SP+     +Q + +KD +  +++S    VI GD N               
Sbjct: 181 -------AAASPARERAGEQVRAIKDSL-LREDSAAKIVIMGDMNDDPMDKSMAVALGAK 232

Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILY 280
                + P D    +                    D  V   N         + +   ++
Sbjct: 233 RKPADVGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRSTLKFYKHEIF 292

Query: 281 NEDDIKSRGKR-----------------LSDHCP 297
             D +  +  +                  SDH P
Sbjct: 293 RRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 326


>gi|315023440|gb|EFT36448.1| AP endonuclease domain protein [Riemerella anatipestifer RA-YM]
          Length = 325

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 88/287 (30%), Gaps = 56/287 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A   ++VS+NI                K   +    +  + ++   DI+ +QE G +   
Sbjct: 92  ASDFKVVSFNI----------------KAAEAGIANIDHHLESFSPDIILIQEKGDFKEE 135

Query: 81  AKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            +  P         FYS   +I   +   + D   A  +  +      +   +       
Sbjct: 136 IESMPYRKEIDILEFYSKTPIIESGRILIDADNGYASYIDTEIKGKRIRFINVYLKPFEL 195

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           ++   + +  L V     K               SL   + P       Q + ++  +  
Sbjct: 196 NKDMVKPSTNLTVSEEKAK---------------SLIARFLPVFKAHQTQVEQIRLAV-- 238

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            ++S  P ++ GDFN   N           +  N +       K        + +  I I
Sbjct: 239 -EKSPYPVILGGDFNAVPNSYEYY-----YLSQNMTDSFLEVGKGLGT-TFHDYKFPIRI 291

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           DY    +                       R ++LSDHCPI  ++ +
Sbjct: 292 DYLFSTKEIKP-------------VSLDTDRSRQLSDHCPIIGEFKY 325


>gi|306827920|ref|ZP_07461187.1| exodeoxyribonuclease III [Streptococcus pyogenes ATCC 10782]
 gi|304429839|gb|EFM32881.1| exodeoxyribonuclease III [Streptococcus pyogenes ATCC 10782]
          Length = 275

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               T   ++     +  S  +     +       K+      ++P +GA  +    G  
Sbjct: 55  KHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKSTLNPVITFPEIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +V  ++  +        +         +     L        ++  
Sbjct: 114 -----IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWDHKYADYLTEL--------DTQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        +  
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLASNRIVDKVKRSEMISSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            +D D
Sbjct: 270 LLDID 274


>gi|29501198|dbj|BAC67542.1| DNA lyase [Isaria tenuipes]
          Length = 607

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 78/326 (23%), Gaps = 80/326 (24%)

Query: 38  EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYST 95
           +  + +     R    +  +    +   ADIV LQE  +   +    +     W +++S 
Sbjct: 4   DFRNPFGYQPWREKRTFQAMFDILE---ADIVILQETKIQRKDLQDDMVLVPGWDVYFS- 59

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKN-----------VRVLQQSYPLLGAKDSFSRAGNRR 144
             L  H K  S   I+T  A                       Y  L             
Sbjct: 60  --LPQHKKGYSGVAIYTKNATCAPILAEEGILGILCPPKSNTPYRELPEDRQIGGYPTLA 117

Query: 145 AV-----ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            +     E L++  G+ + +L+        + S  N             + L+  I    
Sbjct: 118 QLSGDVDEALLDSEGRCL-ILEFPAFVLFGVYSPANRDESRIEFRQSFVEALEARIRNLV 176

Query: 200 ESLVPFVIAGDFNR----------------------KINYLGNNDDFWKTIDPNDSL--- 234
            +    ++ GD N                       +   +       + +     +   
Sbjct: 177 AAGKQVILTGDLNIIRSEMDSSNVAEGLKKEGMTMEEWQSMPTRRILNQLLFDGSVIGPR 236

Query: 235 ---------------IRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESF 275
                              +     C   K           IDY +       + +  + 
Sbjct: 237 DKAREDGVLWDICRCFHPTRRGMHTCWDTKRNTRPANLGSRIDYILCSDGIKDWFVDSNI 296

Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301
                        G   SDHCP+   
Sbjct: 297 Q-----------EGLMGSDHCPVYAT 311


>gi|307944213|ref|ZP_07659554.1| putative endonuclease/exonuclease/phosphatase [Roseibium sp.
           TrichSKD4]
 gi|307772559|gb|EFO31779.1| putative endonuclease/exonuclease/phosphatase [Roseibium sp.
           TrichSKD4]
          Length = 342

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 77/292 (26%), Gaps = 53/292 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             ++    ++L+S N+  L   +                  L  Y    +ADI+  QE  
Sbjct: 94  PNSAETPDLKLISINLERLYLND----------------KTLTDYLVAQNADILLFQETF 137

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +    ++   +             H  R                  +    Y  + A D
Sbjct: 138 -WWQQDRLLALDGLTEIAGLGPYPEHLVR-----GELGQTSIFSKFPITNVEYIEVPASD 191

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             +  G R  V + +E     I +  +H  S                        L D +
Sbjct: 192 VRNLTGYREIVIVDIETPQGPIQLFAVHPNSPRSPT--------RWQERQNYLDLLTDAV 243

Query: 196 TQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
            + ++ S  P +I GD+N           F+  +D       FP           + R  
Sbjct: 244 RRRQQASDSPVIIMGDWNTSPWSWH----FFTLLDETGLNTAFPNGIPQTTRFFYDYRLH 299

Query: 255 IPI----DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +    D+  +  +     +                      DH P+ ++ 
Sbjct: 300 WILGAIVDHVAVSDDFQFTDVSLGPDVGT--------------DHLPLEVEL 337


>gi|90962461|ref|YP_536377.1| exodeoxyribonuclease III [Lactobacillus salivarius UCC118]
 gi|301299216|ref|ZP_07205503.1| exodeoxyribonuclease III [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90821655|gb|ABE00294.1| Exodeoxyribonuclease III [Lactobacillus salivarius UCC118]
 gi|300853176|gb|EFK80773.1| exodeoxyribonuclease III [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 275

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+         +   R      +L       + DI+ +QE          
Sbjct: 1   MKLISWNIDSLNA-----ALTSDSARAKQSREVLATIIDE-NPDIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +    +   S ++     +       KN      SYP + A +     G  
Sbjct: 55  KHQTILAEQFPDYEIAWRSSQEPARKGYAGTMFLYKNNLNPTISYPEIDAPEPMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L            
Sbjct: 114 -----IITLEFDSFYVTQVYTPNAGDGLRRLAERQVWDEKYADYLVSLDQ--------NK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F        +  
Sbjct: 161 PLLSSGDFNVAHKEIDLAHPGNNHHSAGFTDEERAGFTNLLNKGFTDTFRYVHGDVKDVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +++    +                DH PI
Sbjct: 221 SWWAQRSRTSKINNSGWRIDYWLASNRIADKIVRSEMLDSGERR-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIN 274


>gi|327193878|gb|EGE60754.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CNPAF512]
          Length = 369

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/366 (13%), Positives = 102/366 (27%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YTLL--RQYAKNLD----- 65
            +RL ++N+  L  +   + ++N +++              Y  L   +     D     
Sbjct: 2   SLRLATFNVENLLTRFDFTGFRNQLRQDRVIKLFEVSSEGVYQQLEQARVIAATDDTRQM 61

Query: 66  ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                    ADI+ LQE+ +  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  TALAIADADADILCLQEIDNMAALQAFEYGYLFRMVGNGYRQKFLVEGNDSRGIDVAVLM 121

Query: 117 RK------KNVRVLQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKI 157
           R+      K      +S+ +   +D                +   R  +EL + I G+ +
Sbjct: 122 REETRDGQKIELRDIRSHAMTTYRDFDLFDEDLALTNRIDDKIFKRDCLELDLLIGGRPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFNR 213
            +  +H KS        +    +  L   +A+ ++  I  +  +       F I GD N 
Sbjct: 182 SLYVVHFKSMGNPRDGLDGRQSTLPLRRAEARAVRRIIEDRFGAGHTAKKSFAICGDMND 241

Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255
                             +                      + +        + R     
Sbjct: 242 YQERVDVVGRRGAGYRFEHQPEAESALDVFSHDGFVENVMARRQPLDRWTLYHARGPQEQ 301

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCP 297
               +DY  +               I               +           + SDHCP
Sbjct: 302 HLCQLDYIWLSPALATHNSGRLPEIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 VVMTLD 367


>gi|77917592|ref|NP_001030119.1| tyrosyl-DNA phosphodiesterase 2 [Rattus norvegicus]
 gi|123780895|sp|Q3T1H5|TYDP2_RAT RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
 gi|74354452|gb|AAI01921.1| Traf and Tnf receptor associated protein [Rattus norvegicus]
          Length = 366

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 85/290 (29%), Gaps = 50/290 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +  ++WNI+ L                      +         D+VFLQE+      
Sbjct: 117 SSTISFITWNIDGLDGCN-----------LPERARGVCSCLALYSPDVVFLQEV------ 159

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                  ++C +        +    +     TAI ++K  V+   Q              
Sbjct: 160 -----IPSYCAYLRKRARTYNIITGNEEGYFTAILLKKGRVKFKGQEIIPFPNT-----K 209

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  + + V + G +  ++  HL+S               +    Q + +   + +  +
Sbjct: 210 MMRNLLCVNVSLGGNEFCLMTSHLEST----------RKHSAERINQLKTVFQKMQEATD 259

Query: 201 SLVPFVIAGDFNRK-------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           S    + AGD N +            N  D W+ +       R+  +  +  N       
Sbjct: 260 STT-VIFAGDTNLRDQEVIKCGGLPDNVFDAWEFL-GKPKHCRYTWDTKANDNLRIPAAC 317

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           K   D           LI +S   I     +    G+  SDH  +    +
Sbjct: 318 KHRFDRIFFRAE-EGHLIPQSLDLIGL---ERLDCGRFPSDHWGLLCTLN 363


>gi|21909832|ref|NP_664100.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS315]
 gi|21904018|gb|AAM78903.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS315]
          Length = 275

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 82/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSR------AVLDTLVAQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++     +  S  +     +       KN      ++P +GA  +    G  
Sbjct: 55  KHIEALLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  +V  ++  +        +         +     L        ++  
Sbjct: 114 -----IITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWDHKYADYLTEL--------DAQK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        +  
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 TWWAQRSKTSKINNTGWRIDYWLASNRIVDKVKRSEMISSGERQ-----------DHTPI 269

Query: 299 SIDYD 303
            +D D
Sbjct: 270 LLDID 274


>gi|169764625|ref|XP_001816784.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Aspergillus oryzae RIB40]
 gi|121807192|sp|Q2UUI3|CCR4_ASPOR RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|83764638|dbj|BAE54782.1| unnamed protein product [Aspergillus oryzae]
          Length = 746

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/361 (10%), Positives = 91/361 (25%), Gaps = 77/361 (21%)

Query: 16  CTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
              +  +K+ ++S+N    S   Q       +          ++    ++ D+DIV LQE
Sbjct: 370 TAGTSTEKITVLSYNALCDSSATQSHFGYTPSRALSWEFRRDVILSELRSHDSDIVCLQE 429

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRK--- 118
           +   +       +  +  +                         +       I + K   
Sbjct: 430 VDQGSYNGYFREQLAYNGYKGVYWPRGRAMGMQEEEAKSVDGCATFFKGTKFILLDKQMI 489

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLE 174
              +   +     G  D ++R   +  + ++V     + G +  V++ HL    +  + +
Sbjct: 490 NFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRLTGSRFIVVNAHL---YWDPAFK 546

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLV------------------------------- 203
           +      ++L ++   L +   +                                     
Sbjct: 547 DVKLIQTAILMEEITKLSETYAKWPACTDKTAFRFSEAEGGEAQTPPEPAPSMEYSSGDQ 606

Query: 204 -PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR--- 244
            P  + GDFN        N                  +  +        F  +       
Sbjct: 607 IPLFMCGDFNSSPGSAAYNLIANGRLTEEHPDLEKRLYGNLSRVGMTHPFKLKSAYNSIG 666

Query: 245 --CNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                N     K  +DY        +   +     +    +          SDH  +  +
Sbjct: 667 ELSFTNYTPDFKDILDYIWFTSNTLHVSALLGEVDKDYLQKVPGFPNFHFPSDHIALFAE 726

Query: 302 Y 302
           +
Sbjct: 727 F 727


>gi|229551285|ref|ZP_04440010.1| endonuclease/exonuclease/phosphatase [Lactobacillus rhamnosus
           LMS2-1]
 gi|229315244|gb|EEN81217.1| endonuclease/exonuclease/phosphatase [Lactobacillus rhamnosus
           LMS2-1]
          Length = 351

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 85/324 (26%), Gaps = 65/324 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            Q    +++NI               G      S +        + +  +    DI F Q
Sbjct: 48  GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRAYSQQAVRKSINGVIKTTQAQQPDIAFYQ 107

Query: 73  EMGSYNAVAKVFPKNTW-----------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           E+      ++   +                       + +          + I    K  
Sbjct: 108 EIDPDGDRSRHVNEVEMVTNAQRQYANVYGQNYDSAYLFYPFNQPIGKAKSGILTLSKAK 167

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP 179
               + Y L    D        RA         NGK+  +++IH+ +F            
Sbjct: 168 VDSARRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFIMVNIHMSAFTP---------- 217

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +  +   Q   L  +I    +     ++AGD+N ++          K +D   + +    
Sbjct: 218 NVKIQQAQFAKLFKYINHAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPKS 277

Query: 240 EKDSRCN--------------------ANKNLRNKIPID-YFVMDQNAYKFLIQESFSEI 278
           +  +                                 ID Y +   N    +  ES   +
Sbjct: 278 KLPAGFYIPTMGLAAAKVPSVRALDQPYKPGKSFVTLIDGYIL-SPN----IKAESVHVV 332

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
                     G + SDH P+ + +
Sbjct: 333 ST--------GFQYSDHNPVVLKF 348


>gi|118497430|ref|YP_898480.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida
           U112]
 gi|195536121|ref|ZP_03079128.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida
           FTE]
 gi|118423336|gb|ABK89726.1| exodeoxyribonuclease III [Francisella novicida U112]
 gi|194372598|gb|EDX27309.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida
           FTE]
          Length = 262

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 90/306 (29%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N N +        W               ++ K  D D + +QE  +       
Sbjct: 2   IKVMTFNANGIRAAARKGFW---------------EWFKTQDVDFLCIQETKAQ------ 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F +    I +         K              KK    + +   L  A D        
Sbjct: 41  FHQLEKDIEHFPTGYYYEFKDAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRY---- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ + +   +  ++L S    D  +           Q  +  K+ + ++ ES  
Sbjct: 97  ------IQFDYENFSIASLYLPSGSSGDVRQ-------EYKMQFLEKYKEILKEQVESGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
            F++ GDFN     +   +                 +   I  +   +   +  + +   
Sbjct: 144 DFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQAWLDHIFDDLGWVDTFRVINHQPLQ 203

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY +        ++ ES         D   R    SDH P+
Sbjct: 204 YTWWSNRGQARANNVGWRIDYHISTPAIKDKVVPES---------DYIYRENWFSDHAPL 254

Query: 299 SIDYDF 304
           +I YDF
Sbjct: 255 TISYDF 260


>gi|319785778|ref|YP_004145253.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1]
 gi|317464290|gb|ADV26022.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1]
          Length = 270

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 84/315 (26%), Gaps = 84/315 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N +        +                +    DAD+V LQE  S       
Sbjct: 1   MRIISFNANGIRSASSKGFF---------------DWLGQQDADVVCLQETKSQE----- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +  +      +  +    ++ +A+  +      ++       D   R    
Sbjct: 41  --HQLADACFRPDGHHCFYRDATTKKGYSGVAIYARREPDEVRTVLGRPDFDDEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  +           Q  +WLK  + +   S  
Sbjct: 96  ------IEARFGNLSVVSFYIPSGSSGELRQGYK-------FQIMEWLKPVLDEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------------------DSLIRF 237
            +V+ GD+N         +      +                               +  
Sbjct: 143 EYVLCGDWNIVRCRKDIRNWTSNQKNSGCLPPERAWLNGMIGPDEGSDGTPPRPGGWVDA 202

Query: 238 PKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
            +    +        N+           IDY  +       L   S             R
Sbjct: 203 YRALHPQGEDYTWWSNRGAARANNVGWRIDYQFVTPGLGSRLRGCSI-----------YR 251

Query: 289 GKRLSDHCPISIDYD 303
            +R SDH P ++DY+
Sbjct: 252 EQRFSDHAPFTVDYE 266


>gi|294501930|ref|YP_003565630.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           megaterium QM B1551]
 gi|295707279|ref|YP_003600354.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           megaterium DSM 319]
 gi|294351867|gb|ADE72196.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           megaterium QM B1551]
 gi|294804938|gb|ADF42004.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           megaterium DSM 319]
          Length = 261

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 76/266 (28%), Gaps = 40/266 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYS--------TERLIN 100
              + L +  K    D++ LQE+        V      + +    +          +L+ 
Sbjct: 18  DKLSCLAEVIKKEKYDVIALQEVSQKVDAPYVYDYIRSDNYAWLLAKELGKQGEDYQLVW 77

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                        IA+  K+  + + S+ +    +       RR V   +E   + +   
Sbjct: 78  DLSHIGYEVYEEGIAILTKHPIIEEHSFFVSQTSNIDYWK-TRRIVGATIEYEKELLTFY 136

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             HL    + D              QQ   L   +        PF + GDFN   +    
Sbjct: 137 SCHL--GWWDDEE--------EPFKQQVDTLLAHVH----KDNPFFLLGDFNNDAHRRNE 182

Query: 221 NDDFWKTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
             D+  +    D+     K+              +    + +D  +             F
Sbjct: 183 GYDYLLSQGLYDTYTLSNKKDSGITVKGNIAGWDDNERALRLDLILSSHAQDIQSSTVVF 242

Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301
           + I Y           +SDH  +S++
Sbjct: 243 NGIHYPV---------VSDHFGVSVE 259


>gi|255085134|ref|XP_002504998.1| predicted protein [Micromonas sp. RCC299]
 gi|226520267|gb|ACO66256.1| predicted protein [Micromonas sp. RCC299]
          Length = 329

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 92/328 (28%), Gaps = 48/328 (14%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQY--AKNLDADIVFLQEMGSYNA 79
           +R++++N+  +  S          S +   ++Y LL      +    D+V LQE+     
Sbjct: 1   LRVMTYNVLADAYSHTWKELYPYLSDEAADAEYRLLLAMEDVRVAKPDVVALQEVDKKWY 60

Query: 80  VAKVFPKNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            A   P+     +      + +  +      +         VR +    L    P+   +
Sbjct: 61  DAFWVPQMRAAGYVPAGGLTEKTGLTREGCATFCRGDEWRPVRTE-ETGLNTPGPMPEER 119

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF-----LDSLENTYSPSCSLLSQQAQ 189
           D+     ++  +   +        +  +   +         ++    +  +  L   QA+
Sbjct: 120 DTSDWVSSQPHLADALSKVNTVAQLAVLESAAGDGRAVVVANTHLFFHPGAVHLRVMQAR 179

Query: 190 WL--------KDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
           WL        + W+    E+          V+ GDFN +             +   D   
Sbjct: 180 WLLRHADGLRRRWVEADNEAGRGGGKEVGLVVCGDFNGEPFDGVIRFVRESVLGAGDGDW 239

Query: 236 RFPKEKDSRC------------------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                                         N        +DY   D +A + +       
Sbjct: 240 ALGSVFRWGAAMHLRHPLALVSACGYPEFTNYVGGFAGSLDYVWFDSSALESVASMPMPP 299

Query: 278 ILYNE-DDIKSRGKRLSDHCPISIDYDF 304
           +     +      +  SDH P+  D  F
Sbjct: 300 LDAVTAETALPNSEFPSDHLPMVADLRF 327


>gi|21244621|ref|NP_644203.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110303|gb|AAM38739.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 266

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 88/313 (28%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +                +    DAD++ +QE  +     ++
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQETKAQE--HQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +         +  S    ++ +A+  ++     ++       D   R    
Sbjct: 44  AGPD-----FLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  ++          Q  QWL+  + +   S  
Sbjct: 96  ------IEARFGNLSVVSFYIPSGSSGELRQDYK-------FQVMQWLRPILDEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID-------------------------PNDSLIRFP 238
            +V+ GD+N     L   +      +                              +   
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADAPEDASAADGRGWVDSY 202

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +    +        N+           IDY ++       L   S             R 
Sbjct: 203 RVLHPQGQDYTWWSNRGAARANNVGWRIDYQLVTPGLRDALKACSI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 ERFSDHAPYIVDY 264


>gi|208779224|ref|ZP_03246570.1| exodeoxyribonuclease III [Francisella novicida FTG]
 gi|208745024|gb|EDZ91322.1| exodeoxyribonuclease III [Francisella novicida FTG]
          Length = 262

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 90/306 (29%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N N +        W               ++ K  D D + +QE  +       
Sbjct: 2   IKVMTFNANGIRAAARKGFW---------------EWFKTQDVDFLCMQETKAQ------ 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F +    I +         K              KK    + +   L  A D        
Sbjct: 41  FHQLEKDIEHFPTGYYYEFKDAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRY---- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ + +   +  ++L S    D  +           +  +  K+ + ++ ES  
Sbjct: 97  ------IQFDYENFSIASLYLPSGSSGDVRQ-------EYKMKFLEKYKEILKEQVESGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
            F++ GDFN     +   +                 +   I  +   +   +  + +   
Sbjct: 144 DFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQAWLDHIFDDLGWVDTFRVINHQPLQ 203

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY +        ++ ES         D   R    SDH P+
Sbjct: 204 YTWWSNRGQARANNVGWRIDYHISTPAIKDKVVPES---------DYIYRENWFSDHAPL 254

Query: 299 SIDYDF 304
           +I YDF
Sbjct: 255 TISYDF 260


>gi|62085812|gb|AAX63297.1| DNA lyase [Beauveria bassiana]
 gi|62085814|gb|AAX63298.1| DNA lyase [Beauveria bassiana]
 gi|62085824|gb|AAX63303.1| DNA lyase [Beauveria bassiana]
 gi|62085826|gb|AAX63304.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 69/303 (22%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPKLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY         + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085806|gb|AAX63294.1| DNA lyase [Beauveria bassiana]
 gi|62085816|gb|AAX63299.1| DNA lyase [Beauveria bassiana]
 gi|62085818|gb|AAX63300.1| DNA lyase [Beauveria bassiana]
 gi|62085828|gb|AAX63305.1| DNA lyase [Beauveria bassiana]
 gi|62085832|gb|AAX63307.1| DNA lyase [Beauveria bassiana]
 gi|62085842|gb|AAX63312.1| DNA lyase [Beauveria bassiana]
 gi|62085848|gb|AAX63315.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 69/303 (22%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPKLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY         + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085800|gb|AAX63291.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 69/303 (22%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQVGGYPKLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY         + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085884|gb|AAX63333.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 69/303 (22%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPKLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY         + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085852|gb|AAX63317.1| DNA lyase [Cordyceps staphylinidicola]
 gi|62085854|gb|AAX63318.1| DNA lyase [Beauveria bassiana]
 gi|62085856|gb|AAX63319.1| DNA lyase [Beauveria bassiana]
 gi|62085858|gb|AAX63320.1| DNA lyase [Cordyceps staphylinidicola]
 gi|62085860|gb|AAX63321.1| DNA lyase [Cordyceps staphylinidicola]
 gi|62085862|gb|AAX63322.1| DNA lyase [Cordyceps staphylinidicola]
 gi|62085864|gb|AAX63323.1| DNA lyase [Cordyceps staphylinidicola]
 gi|62085866|gb|AAX63324.1| DNA lyase [Cordyceps bassiana]
 gi|62085868|gb|AAX63325.1| DNA lyase [Beauveria bassiana]
 gi|62085870|gb|AAX63326.1| DNA lyase [Beauveria bassiana]
 gi|62085872|gb|AAX63327.1| DNA lyase [Beauveria bassiana]
 gi|62085876|gb|AAX63329.1| DNA lyase [Beauveria bassiana]
 gi|62085878|gb|AAX63330.1| DNA lyase [Beauveria bassiana]
 gi|62085880|gb|AAX63331.1| DNA lyase [Beauveria bassiana]
 gi|62085882|gb|AAX63332.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 69/303 (22%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPKLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY         + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085886|gb|AAX63334.1| DNA lyase [Beauveria bassiana]
 gi|62085888|gb|AAX63335.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 69/303 (22%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPKLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY         + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|242280566|ref|YP_002992695.1| endonuclease/exonuclease/phosphatase [Desulfovibrio salexigens DSM
           2638]
 gi|242123460|gb|ACS81156.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio salexigens DSM
           2638]
          Length = 349

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 94/300 (31%), Gaps = 38/300 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRT-TSDYTLLRQYAKNLDADIVFLQEMGSY-- 77
             K++++S+N+   +    ++L     +   T++        +  DA+IV LQE+     
Sbjct: 57  GDKLKVLSYNLGFAAGPMQLTLADEHPEDFFTANLDEFINLVREEDANIVLLQEVDLDSK 116

Query: 78  -----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                N +  +  +  W           +        I  A  V  K   V  +      
Sbjct: 117 RSWYMNQLQYIMERLGWGYAAPVVDWDMYFPLRKERKITKATVVISKFPIVSNEYTQTSC 176

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             +  +R  N     LL +   +++ V     +   +   L      +      QA++L 
Sbjct: 177 KPNFENRILNIFYYPLLWKSTMQRVEVEVAGKRVGIYNVHLCVWNRAA---RVAQAEYLT 233

Query: 193 DWITQKKESLVPFVIAGDFNRK--------INYLGNNDDFWKTIDPN-----DSLIRFPK 239
           +WI + +   V +++ GDFN +             +   F      N     + L    +
Sbjct: 234 EWINR-ESRDVDYLVGGDFNFQAYIRGTPIPEKDLSKPPFINQFRANLAGVSEILSSPDE 292

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             ++          K   D+    +      + ES   I              SDH P+ 
Sbjct: 293 SAEALHKNFTFEERKHRYDFLFYSKGL----VLESAEVI---------DTIASSDHYPVF 339


>gi|116329129|ref|YP_798849.1| sphingomyelinase B [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116121873|gb|ABJ79916.1| Sphingomyelinase B [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
          Length = 826

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 92/300 (30%), Gaps = 26/300 (8%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
             S   +++++S N++ +S    +  W +  ++  ++      Y K+   DI+  + +  
Sbjct: 344 FNSQNLEIKILSHNVSLMST--QLPAWADWGQKERAEQIANSDYIKHQ--DIIVFEGLSD 399

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSY 128
            NA   +         Y TE + +     +               + +  +     +  Y
Sbjct: 400 ANARKILLDGIRSQYPYQTEAVGSTRNGWNATLGVYRQSTSADGGVVIVSQWPIEEKVQY 459

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                      + ++    + +  NGKK  V+   ++      S          +   Q 
Sbjct: 460 IFDNPGCGVESSYHKGFNYVRINKNGKKFHVIGTQVQMVGPACSDLGRS-----VRMNQF 514

Query: 189 QWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +KD+I  K        +IAGD N                         P  +D + NA
Sbjct: 515 NNIKDFIDTKAIPRDELVLIAGDLNVTRGSDEYYGMLTSLNVSEPKYAGIPYTQDPQVNA 574

Query: 248 ----NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCPIS 299
                         +Y ++ ++  +  + ++ +    +    K          SD  P+ 
Sbjct: 575 LTALRHRDSQPTYTNYVLVSKSHSQPEVWQNLAYDPISPKIWKRSNGHISYEFSDSYPVY 634


>gi|116630243|ref|YP_815415.1| exonuclease III [Lactobacillus gasseri ATCC 33323]
 gi|116095825|gb|ABJ60977.1| Exonuclease III [Lactobacillus gasseri ATCC 33323]
          Length = 268

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 71/303 (23%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                            +LDADI  +Q+        ++
Sbjct: 15  MKFMSWNVNGLRAALRHGF---------------VNTFTDLDADIFAIQDTRVEPNEVQI 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++  +   ++                     +   + +             
Sbjct: 60  -DLPGYYQYWNYAKRKGYAGTAVFTKEK---------PITVANGFGVPEVDGEGR----- 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     + +D+ +          +               L  +         
Sbjct: 105 -----SITLEFSNFYFIDVQVPFSGEKLQRLDFRELWAQTFRNYVTKLMQY--------K 151

Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NK 249
           P +I GD +   +          +    +  I+  +                        
Sbjct: 152 PVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERKEFSELLNAGFIDTFRYFHPDEAKYT 211

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DYF++  N    +I                     SDHCPI +
Sbjct: 212 YWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQIL-----------NNIMGSDHCPIEL 260

Query: 301 DYD 303
           D D
Sbjct: 261 DLD 263


>gi|224543695|ref|ZP_03684234.1| hypothetical protein CATMIT_02905 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523348|gb|EEF92453.1| hypothetical protein CATMIT_02905 [Catenibacterium mitsuokai DSM
           15897]
          Length = 248

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 85/304 (27%), Gaps = 80/304 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N +         ++                K+LDADI  LQE  +       
Sbjct: 1   MKYVSWNVNGIRACLKKGFLES---------------FKSLDADIFALQETKAQKD-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                + ++ +      +          +  A+  +   +                    
Sbjct: 45  LDIPGYTLYTNDAIKKGY----------SGTAILTRMKPLSVS----------------- 77

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E   ++  V+ +  + + F+           + +  + +W   ++        
Sbjct: 78  --YGIGIEEYDQEGRVITLEFEDYYFVPCYTPNSKKELARIDYRMEWEDAFLAYLDALNK 135

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N   +                          +  +  +  F      + +A 
Sbjct: 136 PVILCGDLNVAHHEIDLKNPSSNHHNAGFSDQERSKMTELLSHGYIDTFRYLYPDKKDAY 195

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYF++ ++  + + +                    SDHCPI 
Sbjct: 196 TWWSYMFKSRERNAGWRIDYFIVSESLKERIKESLI-----------YSDILGSDHCPIG 244

Query: 300 IDYD 303
           ++ +
Sbjct: 245 LEME 248


>gi|83950985|ref|ZP_00959718.1| hypothetical protein ISM_07785 [Roseovarius nubinhibens ISM]
 gi|83838884|gb|EAP78180.1| hypothetical protein ISM_07785 [Roseovarius nubinhibens ISM]
          Length = 327

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 83/305 (27%), Gaps = 66/305 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---------- 75
           + +WN+      +                    ++   L  D++ L EM           
Sbjct: 60  IAAWNLERCLFPQAS-----------------AEHLARLGPDVILLSEMDCGMARTGQRH 102

Query: 76  -SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYP 129
            +      +     + + +    L   ++R    D H        A+           + 
Sbjct: 103 TTREIAQALGMSYAYGVEFFEMGLGGPTERSFCTDDHNRLGFHGNAILSSAPLTRVAMFR 162

Query: 130 LLGAKDSFS------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L      F+      R G R A+   ++     I V+  HL+S           + +   
Sbjct: 163 LDDQGHWFNLDPDQPRLGTRMALAAEIDTATGPICVVSTHLES-----------NANAEY 211

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
              Q   L + +        P VI GD N   +   + D   +T+      + +  +  +
Sbjct: 212 RHVQFLQLLERVDYFAR-GCPIVIGGDLNTGNHMPPDFDWRQETLFDLACALGYSWQGSA 270

Query: 244 RCNA------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                       +    + +D+      +       S          +   G+ LSDH  
Sbjct: 271 PGQTTRPSLITPHPDRTMRLDWIATRDCSPVEQGILSA---------LNPDGRPLSDHDC 321

Query: 298 ISIDY 302
           +    
Sbjct: 322 VWCRL 326


>gi|320168591|gb|EFW45490.1| hypothetical protein CAOG_03474 [Capsaspora owczarzaki ATCC 30864]
          Length = 397

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/356 (10%), Positives = 89/356 (25%), Gaps = 77/356 (21%)

Query: 14  VPCTASVAQK---------VRLVSWNINTLS--------EQEGVSLWKNSVKRTTSD--- 53
           V C A+ A           +R+ S+N   L          +E  +  K S + + SD   
Sbjct: 50  VACPAAPANPEDRRTDKSRLRVASFNAEWLFLGQLAPTGARESGTDDKRSSQSSDSDVHR 109

Query: 54  ---------------------YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92
                                +  + +  K+++ADI+ L E+ +   +  +        +
Sbjct: 110 RGAISCPGDCTWTTPQEAVQHFDRVVKVLKDVNADIINLVEIENCTILYYLVNALPGFGY 169

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150
               +    +  D+    +  I  R          +S        +   A        + 
Sbjct: 170 ----KPYLITGTDTATGQNVGILTRVDPYMAMTRDESRQNYPVPGTQCAAATASGTTGVS 225

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
           +       + +  +         +   + +C     QA   ++        +   +  GD
Sbjct: 226 KHYLTAFQINNKKVGMMGLHLLSQPWQAENCRKREAQALVARNAADTILAGVDELIFLGD 285

Query: 211 FNR--------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           FN                            +                    +   ++   
Sbjct: 286 FNDYDGTVLDIAGSVPTSRTLEYLKTPINPSTAHLALSNVASHVPLENRYTSWWDKDNSC 345

Query: 257 ----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     ID+ ++       +    F                +SDH P+ +D+
Sbjct: 346 VDEGGDEHTSIDHMLVSAGLAAGIQNVLFDHEFVACCQC------VSDHWPVVVDF 395


>gi|241888987|ref|ZP_04776291.1| endonuclease/exonuclease/phosphatase family protein [Gemella
           haemolysans ATCC 10379]
 gi|241864236|gb|EER68614.1| endonuclease/exonuclease/phosphatase family protein [Gemella
           haemolysans ATCC 10379]
          Length = 354

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 100/321 (31%), Gaps = 61/321 (19%)

Query: 17  TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           +A V  +   ++WNI               G  +          +   + +  KN  A++
Sbjct: 49  SAKVGTEYTALNWNIGYAGLDKDEDFFMDGGKMVLPLDKAHVEENLKNITEIVKNEKANV 108

Query: 69  VFLQEMGSYNAVAK-------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            F+QE+   +  +              +     +                  + I+TA +
Sbjct: 109 NFIQEIDEDSKRSYNINQVTKFDEILGLNSILAYNFKVRYVPYPVPPLGKVKSGIYTATS 168

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
              +N R  Q + P    +   +       +   VE + K + +++ HL ++   +S + 
Sbjct: 169 FNVENARRFQMAIPFTFPERLANLKRGFSVIYTKVENSDKHLVLINAHLDAYDKGNSGKK 228

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK------------INYLGNNDD 223
                      Q + L ++I  + +     ++  DFN+                L   ++
Sbjct: 229 A----------QMKQLLEFIDYEYKKGNYVLVGADFNQSLKTLTQDEINVVPKELWRAEN 278

Query: 224 FWKTIDPNDSLIRFPKEKDS---RCNANKNLR---NKIPIDYFVMDQNAYKFLIQESFSE 277
             K++ P    + + + K+S                   ID ++   N     +      
Sbjct: 279 LDKSMLPAGFNLLYDESKNSARLNNKPYVKDSEGTYGFIIDGYIASDNIEVLEV------ 332

Query: 278 ILYNEDDIKSRGKRLSDHCPI 298
                 +  ++  R SDH P+
Sbjct: 333 ------ETLNQEYRYSDHNPV 347


>gi|225629507|ref|ZP_03787540.1| endonuclease/exonuclease/phosphatase family protein [Brucella ceti
           str. Cudo]
 gi|260167808|ref|ZP_05754619.1| endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           F5/99]
 gi|261757244|ref|ZP_06000953.1| endonuclease/exonuclease/phosphatase family [Brucella sp. F5/99]
 gi|225616003|gb|EEH13052.1| endonuclease/exonuclease/phosphatase family protein [Brucella ceti
           str. Cudo]
 gi|261737228|gb|EEY25224.1| endonuclease/exonuclease/phosphatase family [Brucella sp. F5/99]
          Length = 285

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 67/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIALQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLREGVVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSALQ--EA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 181 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATAVPSFPSRFPVLALDR 230

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              + I   E       +  SDH PI    D
Sbjct: 231 VL----------GAPDNLITSVEVHNTPLARLASDHLPIKAHLD 264


>gi|219882679|ref|YP_002477843.1| Endonuclease/exonuclease/phosphatase [Arthrobacter chlorophenolicus
           A6]
 gi|219861685|gb|ACL42026.1| Endonuclease/exonuclease/phosphatase [Arthrobacter chlorophenolicus
           A6]
          Length = 325

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 82/311 (26%), Gaps = 56/311 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
               ++R+ + NIN               +RT      L          ++ LQE+  + 
Sbjct: 9   PAEHQLRVTTLNINH--------APDELERRTGLACDELSALL----PAVLCLQEVR-FE 55

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                F  +T         +   ++  + +   +  A+      +   S  L        
Sbjct: 56  VDGGSFQLDTIAAETGLAVVSARAQHPTRDGALSGNAILSHLPAIEAGSIVLGTP----D 111

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ- 197
               R    +L    G+ + V+  HL                      Q   + + +   
Sbjct: 112 CQLTRADYAVLEATTGQTLIVVSAHLAWGG----------DQEGTRLIQMTAIDNRVRTL 161

Query: 198 ---KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE-------------K 241
               ++     ++AGDFN       N     +    ND    + +               
Sbjct: 162 MGRYQDQNPVAILAGDFNTLPTSDTNRYLNGQGTGANDGYTFWTEAFAVVGNPEEAATVA 221

Query: 242 DSRCNANKNLR----------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                A +  R              IDY      AY         +  +   D    G  
Sbjct: 222 AGNYWAQQTARSVGIEFPEMLPDRRIDYVWTYGWAYGRPGCPVAMQRSFT--DTTRYGYP 279

Query: 292 LSDHCPISIDY 302
            SDH  +++D+
Sbjct: 280 ASDHYGLTVDF 290


>gi|23500781|ref|NP_700221.1| endonuclease/exonuclease/phosphatase family protein [Brucella suis
           1330]
 gi|62317886|ref|YP_223739.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269864|ref|YP_419155.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis biovar Abortus 2308]
 gi|161621107|ref|YP_001594993.1| endonuclease/exonuclease/phosphatase [Brucella canis ATCC 23365]
 gi|163845172|ref|YP_001622827.1| hypothetical protein BSUIS_B1055 [Brucella suis ATCC 23445]
 gi|189023136|ref|YP_001932877.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19]
 gi|225686811|ref|YP_002734783.1| endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC
           23457]
 gi|237817428|ref|ZP_04596420.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus str. 2308 A]
 gi|254690629|ref|ZP_05153883.1| Endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str.
           870]
 gi|254696066|ref|ZP_05157894.1| Endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
 gi|254699176|ref|ZP_05161004.1| Endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254705484|ref|ZP_05167312.1| Endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M163/99/10]
 gi|254712812|ref|ZP_05174623.1| Endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1]
 gi|254715882|ref|ZP_05177693.1| Endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1]
 gi|254732620|ref|ZP_05191198.1| Endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str.
           292]
 gi|256015823|ref|YP_003105832.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           microti CCM 4915]
 gi|256058783|ref|ZP_05448999.1| Endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33]
 gi|256111006|ref|ZP_05452068.1| Endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3
           str. Ether]
 gi|256157291|ref|ZP_05455209.1| Endonuclease/exonuclease/phosphatase [Brucella ceti M490/95/1]
 gi|256253732|ref|ZP_05459268.1| Endonuclease/exonuclease/phosphatase [Brucella ceti B1/94]
 gi|256255809|ref|ZP_05461345.1| Endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str.
           C68]
 gi|256262053|ref|ZP_05464585.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2
           str. 63/9]
 gi|260545119|ref|ZP_05820940.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus NCTC 8038]
 gi|260756200|ref|ZP_05868548.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str.
           870]
 gi|260760431|ref|ZP_05872779.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str.
           292]
 gi|260763671|ref|ZP_05876003.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882024|ref|ZP_05893638.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str.
           C68]
 gi|261216498|ref|ZP_05930779.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
 gi|261217643|ref|ZP_05931924.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1]
 gi|261220866|ref|ZP_05935147.1| endonuclease/exonuclease/phosphatase [Brucella ceti B1/94]
 gi|261312890|ref|ZP_05952087.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M163/99/10]
 gi|261320519|ref|ZP_05959716.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1]
 gi|261322721|ref|ZP_05961918.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33]
 gi|265992544|ref|ZP_06105101.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3
           str. Ether]
 gi|265995778|ref|ZP_06108335.1| endonuclease/exonuclease/phosphatase [Brucella ceti M490/95/1]
 gi|297249181|ref|ZP_06932882.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str.
           B3196]
 gi|23464438|gb|AAN34226.1| endonuclease/exonuclease/phosphatase family protein [Brucella suis
           1330]
 gi|62198079|gb|AAX76378.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|82940138|emb|CAJ13186.1| Endonuclease/exonuclease/phosphatase family [Brucella melitensis
           biovar Abortus 2308]
 gi|161337918|gb|ABX64222.1| Endonuclease/exonuclease/phosphatase [Brucella canis ATCC 23365]
 gi|163675895|gb|ABY40005.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|189021710|gb|ACD74431.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19]
 gi|225642916|gb|ACO02829.1| Endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC
           23457]
 gi|237788241|gb|EEP62457.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus str. 2308 A]
 gi|255998483|gb|ACU50170.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           microti CCM 4915]
 gi|260098390|gb|EEW82264.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus NCTC 8038]
 gi|260670749|gb|EEX57689.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str.
           292]
 gi|260674092|gb|EEX60913.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676308|gb|EEX63129.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str.
           870]
 gi|260871552|gb|EEX78621.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str.
           C68]
 gi|260918105|gb|EEX84966.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
 gi|260919450|gb|EEX86103.1| endonuclease/exonuclease/phosphatase [Brucella ceti B1/94]
 gi|260922732|gb|EEX89300.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1]
 gi|261293209|gb|EEX96705.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1]
 gi|261298701|gb|EEY02198.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33]
 gi|261301916|gb|EEY05413.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M163/99/10]
 gi|262550075|gb|EEZ06236.1| endonuclease/exonuclease/phosphatase [Brucella ceti M490/95/1]
 gi|262763414|gb|EEZ09446.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3
           str. Ether]
 gi|263091743|gb|EEZ16074.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2
           str. 63/9]
 gi|297173050|gb|EFH32414.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str.
           B3196]
 gi|326411221|gb|ADZ68285.1| Endonuclease/exonuclease/phosphatase family [Brucella melitensis
           M28]
          Length = 285

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 67/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIALQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLREGVVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSALQ--EA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 181 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATAVPSFPSRFPVLALDR 230

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              + I   E       +  SDH PI    D
Sbjct: 231 VL----------GAPDNLITSVEVHNTPLARLASDHLPIKAHLD 264


>gi|25011656|ref|NP_736051.1| hypothetical protein gbs1616 [Streptococcus agalactiae NEM316]
 gi|77413444|ref|ZP_00789636.1| exodeoxyribonuclease III [Streptococcus agalactiae 515]
 gi|24413196|emb|CAD47275.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160538|gb|EAO71657.1| exodeoxyribonuclease III [Streptococcus agalactiae 515]
          Length = 275

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSESTRALMSR------QVIDTLVAEDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++    L+  S  +     +       +       S+P + A  +    G  
Sbjct: 55  KHLEVLETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  ++  ++  +                  ++    L        +S  
Sbjct: 114 -----IITLELENCYITQVYTPNAGDGLKRLGDRQIWDIKYAEYLATL--------DSQK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N                           +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 SWWAQRSRTSKINNTGWRIDYWLTSNRVADKITKSEMIHSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 ILEIE 274


>gi|291414604|ref|XP_002723552.1| PREDICTED: deoxyribonuclease I-like 2 [Oryctolagus cuniculus]
          Length = 304

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 83/304 (27%), Gaps = 43/304 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +R+ ++NI +  + +       SV         + Q       D+  +QE+   + +
Sbjct: 19  ATALRIGAFNIQSFGDSKVSDPACGSV---------IAQILAGY--DVALVQEVRDPD-L 66

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKDSF 137
           + V          S       S +    D +        RK  V V+             
Sbjct: 67  SAVSALMEQIHSVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDAVSVV-----DTYQYPDP 121

Query: 138 SRAGNRRAVELLVEINGKK--------------IWVLDIHLKSFCFLDSLENTYSPSCSL 183
             A +R    +     G                +      L      + +      +   
Sbjct: 122 EDAFSREPFVVKFSAPGSGEAGSAPRSLPPDPGVKADVPTLHPAAARELVLIPLHAAPHQ 181

Query: 184 LSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
              +   L D      +       +  GDFN   +Y+   D     +  ++       + 
Sbjct: 182 AVAEIDALYDVYLDVIDKWGSDDMLFLGDFNADCSYVRAQDWASIRLRSSEVFKWLIPDS 241

Query: 242 DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPI 298
                 N +       D  V       + L  +S +   + E+    + + L  SDH P+
Sbjct: 242 ADTTVGNSDCAY----DRIVACGARLRRSLKPQSATVHDFQEEFGLDQTQALAISDHFPV 297

Query: 299 SIDY 302
            +  
Sbjct: 298 EVTL 301


>gi|323524445|ref|YP_004226598.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
 gi|323381447|gb|ADX53538.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
          Length = 259

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +    +AD++ +QE+         
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWFGEQNADVLCVQEIKCSQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      + +         A    +     +      +G          R
Sbjct: 43  ---DMTPEFMAPHDFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE+   K+ V+ +++ S    +  +                L            
Sbjct: 95  Y-----VELRFGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAELAR--------ER 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R    
Sbjct: 142 EVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          +               R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIASTAKRTEV-----------FRDIKFSDHAPLT 250

Query: 300 IDYD 303
           +DYD
Sbjct: 251 VDYD 254


>gi|237749208|ref|ZP_04579688.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13]
 gi|229380570|gb|EEO30661.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13]
          Length = 260

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 67/273 (24%), Gaps = 65/273 (23%)

Query: 59  QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
            +     +D V LQE+   S +   +V   + +  ++       +S              
Sbjct: 22  DWMNRSGSDFVCLQEIKAQSCDITPEVATPDGYQGYFECAEKKGYSGTGIYTKTMP---- 77

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                          G       A  R       + + +   ++ ++  S       +  
Sbjct: 78  ----------DKIENGFGSKEFDAEGRY-----FQCDFRDFSLVSLYAPSGSSSPERQEA 122

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                       + LKD       S   FVI GD+N                        
Sbjct: 123 KFRFMDEFYPYLKKLKD-------SGREFVICGDWNIAHKEIDLKNWKSNQKNSGFLPEE 175

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNK---------IPIDYFVMDQNAYKFL 270
                   D    +  +          A     N+           IDY +      K  
Sbjct: 176 RAWLTDVFDELGWVDVYRLLHPDTTGEAYTWWSNRGQAYAKNVGWRIDYQIATPGIAKKA 235

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +                +G+R SDH P++I YD
Sbjct: 236 VSADI-----------YKGERFSDHAPLTIRYD 257


>gi|217927085|gb|ACK57212.1| CG12034-like protein [Drosophila affinis]
          Length = 321

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 61/214 (28%), Gaps = 18/214 (8%)

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRV-----LQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
            +S    +  I   + V  K   +                      G +      + +  
Sbjct: 2   PYSHYFHSGVIGAGLLVLSKYPILGTLFHAWSVNGYFHRIQHADWFGGKGVGLCRILVGD 61

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           + + + + HL +    D+ E       +    QA     +I   + + V  ++AGD N +
Sbjct: 62  QMVHLYNAHLHAEYDNDNDEYK-----THRVIQAFDTAQFIEATRGNSVLQILAGDLNAQ 116

Query: 215 INYLGNNDDFW--KTIDPNDSLIRFPKEKDSRCNAN----KNLRNKIPIDYFVMDQNAYK 268
              +      +  K +D   S      E D     +          I ID+  +      
Sbjct: 117 PQDISYKVLLYTSKMLDSCASDTFRTNECDHNSYTSAKALSKNPRGIRIDHIFVRGG--D 174

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +  E     L   D +  +    SDH  +    
Sbjct: 175 NINAEIVEYTLPLPDRVPGQKFSFSDHEAVLAKL 208


>gi|198282936|ref|YP_002219257.1| Endonuclease/exonuclease/phosphatase [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198247457|gb|ACH83050.1| Endonuclease/exonuclease/phosphatase [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 258

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/296 (10%), Positives = 82/296 (27%), Gaps = 60/296 (20%)

Query: 19  SVAQKVRLVSWNI---------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           + A +  + S+NI           +       +  +   ++  +   +    +    D+ 
Sbjct: 2   TEAPEFSVTSFNIQVGIGSHRARHMFLHGWKYVMPH--GQSLRNLERIAAVLEGT--DVA 57

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSY 128
            L E+ + +  ++   +  +    +        + RD  +    +  +  +       ++
Sbjct: 58  GLNEVDAGSFRSQYVNQAGFLADRAHFPYWAQQRTRDFGDFAQHSNGILSRWPIEETIAH 117

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
            L    +       R  +E  +   G+ + V+  HL               S      Q 
Sbjct: 118 SLPSFMNG------RGMLENRLNAGGRSLTVIITHLGL-------------SRHARLSQI 158

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + L   +  +       ++ GD N             + +     L   P          
Sbjct: 159 RDLAQRLRGRPN----LILMGDLNCTARSPE-----MRLLLNESGLQAPPWSPP----TF 205

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +   +   D+ +   +    +I              ++  + LSDH  +     +
Sbjct: 206 PSWSPRFSFDHILCSPDLEFTMI--------------ETVTEPLSDHLALKAKLRW 247


>gi|154417707|ref|XP_001581873.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
 gi|121916104|gb|EAY20887.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
          Length = 424

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 80/296 (27%), Gaps = 30/296 (10%)

Query: 18  ASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           A    +  ++SWNI     ++Q                   +   A+ L   +  LQE+ 
Sbjct: 144 AVQNGQFSIISWNIIAQHEAKQSRFHSTPARYLAWEYRMEHILNIAQMLKPSLFCLQEIE 203

Query: 76  SYNAVA-----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
             +        +         F +  R+             TA    ++ V +     P 
Sbjct: 204 EKSLHELTERMRTIGYGCVSSFGTRTRIPGAPHSGIATFFLTARLSVERTVTIQFSDLPA 263

Query: 131 LGAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      N    +L +V + G+  +++   L    F             ++  Q  
Sbjct: 264 NEQITKLQLLENDAIFQLSVVRLQGQSFYLIHTSLFPNHFD----------SKIIEAQIN 313

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            + D +          +I G F  + N        +  I  ND                +
Sbjct: 314 IILDRVKDLSVQK---IICGSFGFEPNSKP-----FNLIKANDQFKCVNYTTPEFF--TQ 363

Query: 250 NLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDYD 303
              +++ I DY       Y      + ++             +  S H PI +  D
Sbjct: 364 WENDEMVISDYIFASSQMYPTGNLVTTTQEDAKSYHHFMPNNQWPSSHLPIGVLID 419


>gi|328781107|ref|XP_001121328.2| PREDICTED: 2',5'-phosphodiesterase 12-like [Apis mellifera]
          Length = 554

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/322 (10%), Positives = 78/322 (24%), Gaps = 40/322 (12%)

Query: 22  QKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           +  R+ S+NI          S+        +          L+ +     ++DI+ LQE+
Sbjct: 232 KNFRVTSYNILANVYSETSFSKDILYPYCPHYALSMDYRKLLILKEIIGYNSDIICLQEV 291

Query: 75  GSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--------- 122
            +    N +        +   Y+ +  +        N           +V          
Sbjct: 292 DATIYKNDLQISLSALNYNSVYNLKNDLKEGLAIFYNQEKFDKLSHDYSVISQGINNLNE 351

Query: 123 --VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              +      +  K +F          +++        ++  +   +  L +       +
Sbjct: 352 FNTVWSQIQDVSTKQTFLNRNT-IIQLIVLRSKENDEILIVGNTHLYFRLKANHIRLLQA 410

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
              L     + K    +  E  V  +  GDFN               +  + S      +
Sbjct: 411 YYGLLYLHTFSKKIKKENPECNVSILYCGDFNSTPQSAVYQLMTQNYVTNDHSDWISDSQ 470

Query: 241 K-----------------DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNE 282
           +                       N        +DY            +    ++     
Sbjct: 471 EHVQNISIKHDLNLASACGIPEYTNYTATFSGCLDYIFYQTDYLAVKQVIPMPNKEELKI 530

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
                     SDH  + +D  +
Sbjct: 531 HTGLPSIVSPSDHIALCVDLKW 552


>gi|320547790|ref|ZP_08042074.1| RgfB protein [Streptococcus equinus ATCC 9812]
 gi|320447550|gb|EFW88309.1| RgfB protein [Streptococcus equinus ATCC 9812]
          Length = 271

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 78/280 (27%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSY------------------NAVAKVFPKNTWCIFY 93
                L +   + D D++ LQE+                      A+ +         + 
Sbjct: 19  KKLFDLAETIYSEDYDVICLQEINQDIRGLETKEVEGYENLPGSPALHRDNYALQLVNYL 78

Query: 94  ST----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
            +                +  +  + +  K     +    L+   D       RR +   
Sbjct: 79  KSQGRHYYWSWAYNHIGYDKYNEGVVILSKKPI--KVQDILVSEVDDEHDFHTRRVLAAE 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            E++GK I V+ +H+  +      E              + L D+         P V+ G
Sbjct: 137 TEVDGKTITVVSLHMSWYGKGFESEWAKLE---------KALSDY-------PKPLVLMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKIPI--DYFVMDQ 264
           DFN   +  G        +D  DS       +       + +    NK  +  D+    +
Sbjct: 181 DFNNPTDTAGYEMILQSPLDLQDSHKVAKVIQGDHTIIEDIDGWEGNKQSLKVDHVFTSK 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                          +SDH  ++++ ++
Sbjct: 241 D---------IDIQSSKVVFDGGESPIVSDHFGLAVELNY 271


>gi|312194867|ref|YP_004014928.1| endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
 gi|311226203|gb|ADP79058.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
          Length = 357

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 71/287 (24%), Gaps = 63/287 (21%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
             + A  VRL++ N+                  + +    L         DIV L+E+  
Sbjct: 128 VPAGAVSVRLLAANLQY----------------SNARAQDLAPQIAAQHPDIVVLEEVS- 170

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                   P     I  S        +    +      AV  +      ++  + G    
Sbjct: 171 --------PLTFAGIDGSGALKPYPYRVVHQDLGAFGYAVFSRFPLSAVRAPVVGGEPM- 221

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                   A   +   +G++  +  +H  S                    Q   L   + 
Sbjct: 222 --------ARMTVTVGDGQRFELFAVHTISPTTT--------AYTKRWRAQLDQLAADVR 265

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-NLRNKI 255
               S +P V+AGDFN   ++          +                       L   I
Sbjct: 266 ---SSPLPVVLAGDFNATRDHRPFRHLLDSGVRD---AHDVTGAGWQPTWPADLTLPPVI 319

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+ +                  +        G   SDH P+  + 
Sbjct: 320 RIDHVLASPA--------------FAITGYHRGGNDGSDHLPVIANL 352


>gi|238504114|ref|XP_002383289.1| transcription factor, putative [Aspergillus flavus NRRL3357]
 gi|220690760|gb|EED47109.1| transcription factor, putative [Aspergillus flavus NRRL3357]
          Length = 746

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/361 (10%), Positives = 91/361 (25%), Gaps = 77/361 (21%)

Query: 16  CTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
              +  +K+ ++S+N    S   Q       +          ++    ++ D+DIV LQE
Sbjct: 370 TAGTSTEKITVLSYNALCDSSATQSHFGYTPSRALSWEFRRDVILSELRSHDSDIVCLQE 429

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINH------------SKRDSNNDIHTAIAVRK--- 118
           +   +       +  +  +                         +       I + K   
Sbjct: 430 VDQGSYNGYFREQLAYNGYKGVYWPRGRAMGMQEEEAKSVDGCATFFKGTKFILLDKQMI 489

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLE 174
              +   +     G  D ++R   +  + ++V     + G +  V++ HL    +  + +
Sbjct: 490 NFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRLTGSRFIVVNAHL---YWDPAFK 546

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLV------------------------------- 203
           +      ++L ++   L +   +                                     
Sbjct: 547 DVKLIQTAILMEEITKLSETYAKWPACTDKTAFRFSEAEGGEAQTPPEPAPSMEYSSGDQ 606

Query: 204 -PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR--- 244
            P  + GDFN        N                  +  +        F  +       
Sbjct: 607 IPLFMCGDFNSSPGSAAYNLIANGRLTEEHPDLEKRLYGNLSRVGMTHPFKLKSAYNSIG 666

Query: 245 --CNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                N     K  +DY        +   +     +    +          SDH  +  +
Sbjct: 667 ELSFTNYTPDFKDILDYIWFTSNTLHVSALLGEVDKDYLQKVPGFPNFHFPSDHIALFAE 726

Query: 302 Y 302
           +
Sbjct: 727 F 727


>gi|209737554|gb|ACI69646.1| Deoxyribonuclease gamma precursor [Salmo salar]
          Length = 310

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 80/288 (27%), Gaps = 33/288 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +++ S+N+  L           S     +    L +        ++ + E+         
Sbjct: 1   MKVASFNVRRLGT---------SKVDDKNVLKYLIKIVSRYS--VLLILEVVDRTGKAMA 49

Query: 79  -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + ++           T        RD+  +       R+ +V++   SY     K   
Sbjct: 50  MFLKELNDTRANKKHPYTMVKSPRLGRDTYKEQFV-FLYRQDHVKLT-HSYQYKDNKVGD 107

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             A  R    L        +  L +        DS++        +   + +W       
Sbjct: 108 EDAFAREPYILRFTCLNTVLKDLVLIPVHTKPEDSVKELDKLYDVVKVVKKKW------- 160

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   +I GDFN   +Y+         I  +        +         N      I
Sbjct: 161 ---KTDHIMILGDFNADGSYVTKRGMRNIRIRSDKKFHWVIGDDVDTTANTSNDHTYDRI 217

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS--DHCPISIDYD 303
              +   +    ++  S     +++    S+   LS  DH P+ ++  
Sbjct: 218 --VMYGDDMLNAMVPNSAKPFNFHKAFRLSKAMALSISDHYPVEVELT 263


>gi|167395170|ref|XP_001741254.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165894244|gb|EDR22304.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 320

 Score = 70.7 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 87/316 (27%), Gaps = 47/316 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R++++N+         +   +   R  +         +  D DI+  QE+       
Sbjct: 13  KPIRILTYNMYLRPMLISAAGHDHKDSRLKAFCKE-----RLKDFDIICFQEVFKELNWR 67

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +              R+               + +  +   V  Q + +           
Sbjct: 68  REKLLKKAKKAGFKYRIQTEKPLFPLFLCDAGLVIISRFPIVENQ-FRMYTRGIYADAVA 126

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK- 199
           ++  +   +E+   K I V D H ++   LD       PS        +    ++ +K  
Sbjct: 127 SKGVLYAKIEVQPEKYILVFDTHTQADYTLDPE--KARPSRDRRMVHIREYAAFVQEKTT 184

Query: 200 ESLVPFVIAGDFN-------RKINYLGNNDDFWK------------TIDPN--------D 232
            +  P +  GDFN                 +F +             +  N         
Sbjct: 185 GNNFPAICCGDFNVNGRAGTDGTTESPEYTEFLQNFVIPNGELIDLLLRDNHGIQPVTFG 244

Query: 233 SLIRFPKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                    ++ C+      +    K  +DY        +       S      D    R
Sbjct: 245 DSFVDENGTETPCDTEITYESQCMDKSRLDYIF---QLKRPNEDPVISCKNCRVDKFPVR 301

Query: 289 GKRL---SDHCPISID 301
           GK+    SDH  ++ D
Sbjct: 302 GKKYPFMSDHFGVTCD 317


>gi|327275223|ref|XP_003222373.1| PREDICTED: endonuclease/exonuclease/phosphatase family
           domain-containing protein 1-like isoform 2 [Anolis
           carolinensis]
          Length = 519

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 75/284 (26%), Gaps = 50/284 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+   S    V    N   R     TLL    K     ++ +QE+   +A+ K 
Sbjct: 252 LRVATWNLQNCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELVDRDALEKS 302

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGN 142
                                      ++           L+  +       +   R   
Sbjct: 303 V-------------------------EYSGFLWDTTAGIELKDIASQENAQTNGNGRHPY 337

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                   ++    + ++++HL     +         S              + +  +  
Sbjct: 338 TEPYIAHFKVGMNDLTLVNLHLVPLPSVGDNAVKNHNSHKS-----AAFAHTLQETLKGE 392

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              +I GDF +  +   ++      +   +              + KN +    +D   +
Sbjct: 393 KDVIILGDFGQAPDCSEHD------VLRKEKFHHLVPVTTFTNISTKNPQGSKSLDNIWI 446

Query: 263 DQNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
            ++  K                 I          S HCP+  ++
Sbjct: 447 SRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASSHCPVLAEF 490


>gi|299533724|ref|ZP_07047096.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44]
 gi|298718273|gb|EFI59258.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44]
          Length = 267

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 75/275 (27%), Gaps = 62/275 (22%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            + +    D + +QE+ +  +             +     +      +    ++ + V  
Sbjct: 22  AWIEATAPDCICVQEIKAQAS--------DMAGRFEVLAGMKGYFHFAEKKGYSGVGVYT 73

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           ++          +   D+  R      VE   +  G+K  ++  +  S    +  +    
Sbjct: 74  RHEPSDVIVGFDIDEFDAEGRY-----VETRFDTPGRKFSIISAYFPSGSSGELRQEAKF 128

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------YLGNND 222
              + +               ++   FV+ GD N                         D
Sbjct: 129 RFLAKMHSHL--------MHLKAERDFVLCGDINIAHQKEDLKNWRGNQKNSGFLPEERD 180

Query: 223 DFWKTID----PNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNAYK 268
              K +         +  + + +    +A      N+           +DY +       
Sbjct: 181 WMSKLLHKTEASGGLVDVYRQLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAIAA 240

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ES             +G++ SDH PI+I YD
Sbjct: 241 LARTESI-----------YKGEKFSDHAPITIGYD 264


>gi|282862201|ref|ZP_06271264.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
 gi|282563226|gb|EFB68765.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
          Length = 253

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 66/279 (23%), Gaps = 52/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++S+N+ +L                  D   L +  +    D+V LQE   +    K 
Sbjct: 21  VRVLSYNVRSL----------------RDDTEALARVIRACAPDLVCLQEAPRFFRWRKA 64

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +               +           + +      V +    LL       R   R
Sbjct: 65  AARLAARTDLVMLAGGATAAG--------PMLLCSLRATVERTEDVLLPRTPGLHR---R 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V I G ++ V+  HL             S        QA  L D +   +    
Sbjct: 114 GLATAVVRIAGARLGVVSCHL-------------SLEREERRTQAGLLLDHLDALEVPHA 160

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V+ GD N   +         +                              ID     
Sbjct: 161 --VVGGDLNDVPDGPAFRRLAGRL------QDCRTVRPWGGEPTFPAPEPVKRIDAVFAT 212

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                               D+    +  +DH P+    
Sbjct: 213 GGVEVLGCGVPAGLPGVTGADL----RAATDHLPVLAAL 247


>gi|297182400|gb|ADI18565.1| exonuclease IIi [uncultured gamma proteobacterium HF4000_23L14]
          Length = 254

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 85/304 (27%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +   E    +                + +  +AD+V LQE+    A    
Sbjct: 1   MRIITINVNGIRAAERKGFFI---------------WLEKQNADVVCLQEI---KAQEHQ 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +  +     T       K  S   ++              +   ++ +      +  R
Sbjct: 43  LDERFYPSGMHTYYHSAERKGYSGTALYCK-----------SKPDQVIYSPWQDINSEGR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ +   + V  I+L S    +  +       S        L   +   +    
Sbjct: 92  L-----IQADFGNLSVASIYLPSGSSKEERQAFKMEFISDR------LLPHLHALQNDGR 140

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            ++  GD+N                   +L     +   +      I   +E +      
Sbjct: 141 QYIYCGDWNIAHKKIDLKNWQSNQKNSGFLPEERAWLDKLYEEVGYIDAFREINQDEFQY 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           +DY V+  N                      + +R SDH P+ 
Sbjct: 201 TWWSNRGQAWLHNTGWRLDYQVVSSNLAGLATACEI-----------YKKERFSDHSPLI 249

Query: 300 IDYD 303
           +DY+
Sbjct: 250 MDYN 253


>gi|301166270|emb|CBW25845.1| putative exodeoxyribonuclease [Bacteriovorax marinus SJ]
          Length = 256

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 80/304 (26%), Gaps = 72/304 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+  +   E   L+             L +        +   QE  +     ++
Sbjct: 1   MKIYSWNVAGIRACEKKGLYDWY-------LEELAE--------VYCFQE--TKALPEQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +S        K  S         +  K+           G          R
Sbjct: 44  NDQLVNPKSHSAIYAPAVKKGYSGVSTWVKSGIEHKHTI---------GLGIEEFDNEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +       ++ + +  +     +        C  + ++AQ L     +      
Sbjct: 95  -----TIITEFDNFFLFNCYFPNGQRDHARVPYKMSYCKAIEEKAQELHQQFKK------ 143

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD+N   +               +L    ++    +    +  F           
Sbjct: 144 DIIITGDYNTAHHPIDLANPKTNTKSTGFLPLEREWMDHFEEIGYVDIFRHFTPEENGHY 203

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF  +++  K +   S    +             SDHCPIS
Sbjct: 204 TWWTYRSNCRERNIGWRIDYFWTNKDMLKNIKGCSHHTDIL-----------GSDHCPIS 252

Query: 300 IDYD 303
           ++ +
Sbjct: 253 LELN 256


>gi|171057854|ref|YP_001790203.1| endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6]
 gi|170775299|gb|ACB33438.1| Endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6]
          Length = 343

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 78/340 (22%), Gaps = 65/340 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRT-------------TSDYTLLRQYAKNL----DADI 68
           +  WN+  L   EG    +  +                      L      +      D+
Sbjct: 5   IAFWNLENLFAPEGHPGREPWLAAAMRRDLAGWTQALFDRKLDQLAAVIVQMKDGAGPDL 64

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + + E+ +  A+  +  +    +      +++         I TA      +   L    
Sbjct: 65  LGVCEVENGYALQALADRLNALLPARRYAVVHVDSSRDQRGIDTAFI---HDSLTLSAQP 121

Query: 129 PLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             L +     R G R   +       G ++  L  H  S          +S      + +
Sbjct: 122 GELFSHWVMRRTGTRDITQATFVTRAGHQLVALANHWPSRSGEPGEGPQHSAGFRATAGE 181

Query: 188 -AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              +  + I   K + V  V  GDFN         D    T +  D          +   
Sbjct: 182 TLGYWHERIRDAKGAGVAVVAMGDFNDDPFDASITDHASATRERGDIQRTQSARFFNLAW 241

Query: 247 AN-------------------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                                    +    D  ++ +            +     +    
Sbjct: 242 RYLTQEAVDRRGKPRTLDGTLYFNGDGHVFDQILVSRGLLGGSGPLRVRDETARIEAWPP 301

Query: 288 ------------------------RGKRLSDHCPISIDYD 303
                                        SDH P+S+  D
Sbjct: 302 MVDHRVGEGPIRFGLPKGNVAENVDIDGFSDHFPVSVRID 341


>gi|86141021|ref|ZP_01059580.1| exodeoxyribonuclease [Leeuwenhoekiella blandensis MED217]
 gi|85832963|gb|EAQ51412.1| exodeoxyribonuclease [Leeuwenhoekiella blandensis MED217]
          Length = 255

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 90/305 (29%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++++N+N +                 +    L  + K  + D++ LQE          
Sbjct: 1   MKIITYNVNGIRA---------------AIRKGLLDWLKAANPDVLLLQETKAHKEQLDI 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F +  +  ++ + +   +          + +A+  K          + G    +    
Sbjct: 46  DLFEETGYHDYWFSAQKKGY----------SGVAILSKKEP----DNIVHGTGIDYMDHE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +   + V+ ++L S   +D              +     + +  + +++
Sbjct: 92  GRN-----IRADFGDLSVMSMYLPSGTNVD--------RLEHKLKYMADFQAYSEELRKT 138

Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247
               +++GD+N     +  +D                W +   N       +  +     
Sbjct: 139 RPNLIVSGDYNICHEPIDIHDPVRLKNVSGFLPVEREWLSGFINSGFTDSFRHLNPNVEQ 198

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           +DY ++ +     + +                  + SDHCP 
Sbjct: 199 YSWWSYRADARANNKGWRLDYNMVSEPLKDKIKRAVIL-----------PEAKHSDHCPA 247

Query: 299 SIDYD 303
            ++ D
Sbjct: 248 LVELD 252


>gi|294625183|ref|ZP_06703825.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294666113|ref|ZP_06731371.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292600502|gb|EFF44597.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292604127|gb|EFF47520.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 266

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 88/313 (28%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +                +    DAD++ +QE  +     ++
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQETKAQE--HQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     Y         +  S    ++ +A+  ++     ++       D   R    
Sbjct: 44  AGPDFLPAGYKAWF-----RDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  ++          Q  QWL+  + +   S  
Sbjct: 96  ------IEARFGNLSVVSFYIPSGSSGELRQDYK-------FQVMQWLRPILDEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID-------------------------PNDSLIRFP 238
            +V+ GD+N     L   +      +                              +   
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADAPEDASAADGRGWVDSY 202

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +    +        N+           IDY ++       L   S             R 
Sbjct: 203 RVLHPQGQDYTWWSNRGAARANNVGWRIDYQLVTPGLRDTLKACSI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 ERFSDHAPYIVDY 264


>gi|77360510|ref|YP_340085.1| hypothetical protein PSHAa1569 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875421|emb|CAI86642.1| putative orphan protein [Pseudoalteromonas haloplanktis TAC125]
          Length = 390

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/374 (9%), Positives = 94/374 (25%), Gaps = 81/374 (21%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR-------TTSDYTLLRQYAK 62
           +F L+      A ++R+ ++N++  +                       S    + +  +
Sbjct: 14  LFCLLLSNYVAAAQLRVATFNVSMDATNYTPRKPPVKSDSLVSALKAEHSQIKNIAEIIQ 73

Query: 63  NLDADIVFLQEMG----------------SYNAVAKVFPKNTWCIFY------------- 93
            +  DI+ L E                  + +   +      +                 
Sbjct: 74  RVRPDIILLNEFDYVPKEQGIAYFKSHYLNVSQNNQAAIDYPYFYIAPVNTGLATEFDLD 133

Query: 94  ---STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ------------------------ 126
                  ++  +      + H  +AV  +    L +                        
Sbjct: 134 NDGKKIGIMGDAHGFGFFEGHYGMAVLSRYPIDLDKVRTLQTFKYKDMPNAQMPIDPTTG 193

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                  +    R  ++   +L + +N K + +L  H     F    +     +   +  
Sbjct: 194 KNWYNEQEWQNIRLSSKSFWDLPISVNNKTVHILASHPTPPVFDGLEDRNGKRNHDEVRL 253

Query: 187 QAQWLKDWITQKKESLV--------PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            A ++ +      +            FVI GD N               +  +  +    
Sbjct: 254 VADYINNADYIYDDKGKKGGLNAQSRFVILGDLNAAPEGDKQRTITTDQLLKHPLVNASF 313

Query: 239 KEKDSRCN---------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
             + +             N +   +  +DY +      K +    F     ++     + 
Sbjct: 314 IPQSAGAKEQYPQHSHAKNYSASWQARVDYVLPSHYGLKIIDGGVFWPTKNSQLYRLIKD 373

Query: 290 KRLS-DHCPISIDY 302
           +  S DH  + +D 
Sbjct: 374 RNASSDHRLVWLDL 387


>gi|149031529|gb|EDL86496.1| similar to putative TRAF and TNF receptor associated protein,
           isoform CRA_a [Rattus norvegicus]
          Length = 305

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 85/290 (29%), Gaps = 50/290 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +  ++WNI+ L                      +         D+VFLQE+      
Sbjct: 56  SSTISFITWNIDGLDGCN-----------LPERARGVCSCLALYSPDVVFLQEV------ 98

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                  ++C +        +    +     TAI ++K  V+   Q              
Sbjct: 99  -----IPSYCAYLRKRARTYNIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNT-----K 148

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  + + V + G +  ++  HL+S               +    Q + +   + +  +
Sbjct: 149 MMRNLLCVNVSLGGNEFCLMTSHLEST----------RKHSAERINQLKTVFQKMQEATD 198

Query: 201 SLVPFVIAGDFNRK-------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           S    + AGD N +            N  D W+ +       R+  +  +  N       
Sbjct: 199 STT-VIFAGDTNLRDQEVIKCGGLPDNVFDAWEFL-GKPKHCRYTWDTKANDNLRIPAAC 256

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           K   D           LI +S   I     +    G+  SDH  +    +
Sbjct: 257 KHRFDRIFFRAE-EGHLIPQSLDLIGL---ERLDCGRFPSDHWGLLCTLN 302


>gi|254000228|ref|YP_003052291.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4]
 gi|253986907|gb|ACT51764.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4]
          Length = 260

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 83/306 (27%), Gaps = 80/306 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VAK 82
           R++S N+N +        +                + +  +ADIV +QE+ +  A    +
Sbjct: 5   RIISANLNGIRSAANKGFYP---------------WLQQQNADIVCMQELKAQLADMTPE 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     +  ++       +S                     +Q    ++G   +   A  
Sbjct: 50  MLNPEGYFGYFHYAEKKGYSGVGIYTR--------------VQPDAVIVGLGIADIDAEG 95

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +E+    + V+ ++L S    +  +       +      + L+        + 
Sbjct: 96  RY-----LELQFGNLSVVSLYLPSGSSGEERQAFKFSVMTRFLVHLEALRA-------AG 143

Query: 203 VPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              VI GD+N                                D    +  +        +
Sbjct: 144 RDVVICGDWNIAHKEADLKNWKGNKKNSGFLPEERAWLTDLFDRVGWVDVYRVLHPDTTD 203

Query: 247 A-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  N+           IDY +         +  S             + +R SDH 
Sbjct: 204 ECYTWWSNRGQAWAKNVGWRIDYQIATPYFAAKAVAASI-----------YKLERFSDHA 252

Query: 297 PISIDY 302
           P+ IDY
Sbjct: 253 PLIIDY 258


>gi|58265518|ref|XP_569915.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134108897|ref|XP_776563.1| hypothetical protein CNBC0570 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259243|gb|EAL21916.1| hypothetical protein CNBC0570 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226147|gb|AAW42608.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 353

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/330 (11%), Positives = 86/330 (26%), Gaps = 50/330 (15%)

Query: 22  QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYN 78
           +++ + + N+                + K  +   + L     +    DI+  QE+    
Sbjct: 20  EQIHIATVNVRNGHQWSPPADPKNVFAEKPWSERKSRLVDALLSTGPLDILGCQEVFHDQ 79

Query: 79  --AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              + ++  + T+    S           S            +   +     P +     
Sbjct: 80  LEDLQELLGE-TYSHVGSGRDDGKQGGEYSPIFFDRTKFELVRWGTMWLSRTPNVPGSKG 138

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  A  R A  L +    K      +H  +  +        + S  L+          + 
Sbjct: 139 WDAALPRIATLLTLRYKNKDKGGELVHAVNTHYDHLGVRARAESSLLIRSAIWHWVHDVE 198

Query: 197 QKKESL--VPFVIAGDFNRKINYLGNND-----------DFWKTIDPNDSLIRFPKE--- 240
           +K++     P V  GDFN      G  +             +  +D   +L+        
Sbjct: 199 RKEKPPVVAPVVFFGDFNSPPQEDGYKNITSLHPLPSGQPSFTFLDSFTNLLTSSSSSAS 258

Query: 241 -----------KDSRCNANKNLRNKI-----PIDYFVMD------------QNAYKFLIQ 272
                               +           ID+ ++             ++   + + 
Sbjct: 259 AFSTIIPLQTRPYGPHLTYTDFAPPGARNATRIDFVMLGAEVDSNDPSKRGKSRGGWTVV 318

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  + E D++    R SDH  + +  
Sbjct: 319 RYACVDNWVEGDMEGWNGRWSDHRAVRVTI 348


>gi|328473849|gb|EGF44679.1| exodeoxyribonuclease III [Listeria monocytogenes 220]
          Length = 225

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/231 (9%), Positives = 59/231 (25%), Gaps = 52/231 (22%)

Query: 97  RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                    +    ++  A+  K   +  Q    +   D+  R         ++ +  ++
Sbjct: 22  PAYKDYWNYAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR---------VITLEFEE 72

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
            +++ ++  +                        + +++    +   P V+ GD N    
Sbjct: 73  FFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTKPVVLCGDLNVAHE 124

Query: 217 Y---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK------- 254
                                  +        +  F        +A      +       
Sbjct: 125 EIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARN 184

Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               IDYFV+ +     L+       +             SDHCP+ ++ +
Sbjct: 185 TGWRIDYFVVSERLKDKLVDAKIHADVL-----------GSDHCPVELELN 224


>gi|300215075|gb|ADJ79491.1| Exodeoxyribonuclease III [Lactobacillus salivarius CECT 5713]
          Length = 275

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+         +   R      +L       + DI+ +QE          
Sbjct: 1   MKLISWNIDSLNA-----ALTSDSARAKQSREVLATIIDE-NPDIIAIQETKLSATGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +    +   S ++     +       KN      SYP + A +     G  
Sbjct: 55  KHQTILAEQFPDYEIAWRSSQEPARKGYAGTMFLYKNNLNPTISYPEIDAPEPMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L            
Sbjct: 114 -----IITLEFDNFYVTQVYTPNAGDGLRRLAERQVWDEKYADYLVSLDQ--------NK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F        +  
Sbjct: 161 PLLSSGDFNVAHKEIDLAHPGNNHHSAGFTDEERAGFTNLLNKGFTDTFRYVHGDVKDVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        +++    +                DH PI
Sbjct: 221 SWWAQRSRTSKINNSGWRIDYWLASNRIADKIVRSEMLDSGERR-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIN 274


>gi|311110171|ref|ZP_07711568.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22]
 gi|311065325|gb|EFQ45665.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22]
          Length = 265

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 71/303 (23%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                            +LDADI  +Q+        ++
Sbjct: 12  MKFMSWNVNGLRAALRHGF---------------VNTFTDLDADIFAIQDTRVEPNEVQI 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++  +   ++                     +   + +             
Sbjct: 57  -DLPGYYQYWNYAKRKGYAGTAVFTKEK---------PITVANGFGVPEVDGEGR----- 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     + +D+ +          +               L  +         
Sbjct: 102 -----SITLEFSNFYFIDVQVPFSGEKLQRLDFRELWAQTFRNYVTKLMQY--------K 148

Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NK 249
           P +I GD +   +          +    +  I+  +                        
Sbjct: 149 PVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERKEFSELLNAGFIDTFRYFHPDEAKYT 208

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DYF++  N    +I                     SDHCPI +
Sbjct: 209 YWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQIL-----------NNIMGSDHCPIEL 257

Query: 301 DYD 303
           D D
Sbjct: 258 DLD 260


>gi|294934513|ref|XP_002781118.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
 gi|239891424|gb|EER12913.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
          Length = 1170

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 75/257 (29%), Gaps = 16/257 (6%)

Query: 19  SVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +  Q ++L++WNI        +                 L+ +    L+ DIV LQE+ S
Sbjct: 306 ATGQAIKLLNWNILADIYCTPQQYPYCPPWALSWNYRRHLIIKQIAALEGDIVCLQEVQS 365

Query: 77  YNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG--A 133
            +    + P      F             D   +   AI  RK    V+          A
Sbjct: 366 DHLYTSLLPALEGLGFGYLYAPKTRRIFTDKYCEEGCAILYRKSRFSVVDSFTIEFDAHA 425

Query: 134 KDSFSRAGNRRA-VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           KDS    G R       +      +  L    +    +++       +  +   QA  + 
Sbjct: 426 KDSARYQGARNTKQRNRLSKGNVALACLLEDSRPLGIVNTHITADVDAGDVKLWQAMCML 485

Query: 193 DWITQKKESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPND-SLIRFPKEKDSRCNAN 248
           + +     S     P ++ GDFN               + P+   +    +   +R N  
Sbjct: 486 EVVQGWSNSQNGVLPVIVCGDFNSTPESAVYELLTTGRLSPSSIPVTLLWRAARNRGNRF 545

Query: 249 KNLRNKIPIDYFVMDQN 265
                       ++  +
Sbjct: 546 PEFMYS------LVRPD 556


>gi|157737072|ref|YP_001489755.1| exodeoxyribonuclease [Arcobacter butzleri RM4018]
 gi|157698926|gb|ABV67086.1| exodeoxyribonuclease [Arcobacter butzleri RM4018]
          Length = 262

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 76/307 (24%), Gaps = 71/307 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A++ + +SWN+N +   +                    ++   ++ D++ +QE  S    
Sbjct: 2   AKRYKFISWNVNGIRAVDKKDA---------------LKWIDEIEVDLLGVQETKS---- 42

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                K+       ++         S     +  A+        Q     +   D     
Sbjct: 43  ----MKDQIPKTIFSKEFKTLFASASAIKGRSGTALFSDIEPTFQSICESVDILDEGR-- 96

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                 E+   +  K I   +++  +        +             + L       K+
Sbjct: 97  ----INEVHFNLADKNIAFFNVYFPNGQSSQERLDYKMEFYDRFLNHCENL-------KK 145

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWK-------TIDPNDSLIRFPKEKDSRCNA------ 247
                ++ GD N     +                ++ +                      
Sbjct: 146 DGKSIIVCGDVNTAHTEIDIARPKANENTSGFLQMERDWITKFLSHGYIDTFRLINGDIK 205

Query: 248 --NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           IDYF +  +              Y +D         SDHC
Sbjct: 206 DKYSWWSYRANARANNVGWRIDYFYVSSDLKD-----------YVKDAYILDNIEGSDHC 254

Query: 297 PISIDYD 303
           PI ++ +
Sbjct: 255 PIGLEME 261


>gi|119489711|ref|ZP_01622470.1| hypothetical protein L8106_13340 [Lyngbya sp. PCC 8106]
 gi|119454448|gb|EAW35597.1| hypothetical protein L8106_13340 [Lyngbya sp. PCC 8106]
          Length = 273

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 45/305 (14%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           R   L  V   +        ++ ++ +N+ +                         QY +
Sbjct: 4   RSIPLFAVLLTLLGGCQSVTQLSVIGFNVESGDADPNYLAD---------------QYIQ 48

Query: 63  NLD-ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            +   D+    E+ + + V +        I  + +         +      AI       
Sbjct: 49  PIQGVDLWGFSEVQNQDWVDRF----ETAIEVNNQADFKSVLGTTGKADKLAIIYNSNQF 104

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            ++         K        R A+    ++   +   L +    +   D          
Sbjct: 105 NLIS----FEELKQINIGGSVRAALVGHFQVKSTQQEFLFMVNHLYRTNDQG-------- 152

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---LGNNDDFWKTIDPNDSLIRFP 238
               +QA+ L  W  +++   +P +  GD+N   +        D  +  +  N       
Sbjct: 153 --RHEQARLLNRWAQKQQ---LPMITVGDYNFDWDVKNGDSKRDPGYDLLTENQVWTWVR 207

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            ++    +   + R    +D+  +                LY E D      + SDH P+
Sbjct: 208 PQEIIATH--CSSRYDTVLDFVFISSQIQPRSASSKI---LYPEADYCPDTSQKSDHRPV 262

Query: 299 SIDYD 303
                
Sbjct: 263 QATLS 267


>gi|332183996|gb|AEE26250.1| Exodeoxyribonuclease III [Francisella cf. novicida 3523]
          Length = 262

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 95/305 (31%), Gaps = 72/305 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++++N N +        W               ++    D D + +QE  +     +  
Sbjct: 3   KVMTFNANGIRAAARKGFW---------------EWFVTQDVDFLCIQETKAQFHQLEKD 47

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            ++    +Y       +  +D+    ++  A+  K   +       L   D   R     
Sbjct: 48  EQHFPDGYY-------YDFKDAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRY---- 96

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                ++ + +K  +  ++L S    D  +           Q  +  K+ + ++ ES   
Sbjct: 97  -----IQFDYQKFSIASLYLPSGSSGDVRQ-------EYKMQFLKRYKEILKEQVESGRD 144

Query: 205 FVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           F++ GDFN     +   +                 +   I  +   +   +  ++     
Sbjct: 145 FIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQAWLDHIFDDLGWVDTFRVINNEPLQY 204

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +        ++ +S         D   +    SDH P++
Sbjct: 205 TWWSNRGQARANNVGWRIDYHISTPALKDKVVPKS---------DYIYKENWFSDHAPLT 255

Query: 300 IDYDF 304
           I YDF
Sbjct: 256 ISYDF 260


>gi|322411016|gb|EFY01924.1| hypothetical protein SDD27957_01170 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 277

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 78/280 (27%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY------------------ 93
                L ++      DI+ LQE+             ++                      
Sbjct: 19  KKLVDLAEHILAEKYDIICLQEINQLIESELAMELPSYQPIVGTPAIHKDHFALLLIHYL 78

Query: 94  ----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+  K       S  L+ A D  +    RR++   
Sbjct: 79  KKRGQHYYWSWAYNHIGYDIYHEGVAILSKQPI--HVSDILVSAMDDETDYHTRRSLVAK 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            +++GK++ ++++HL  F      E                      +      P ++ G
Sbjct: 137 TKLDGKEVAIVNVHLSWFDKGFLGEWERLE----------------KELLSLNCPLILMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN   +  G        +D  DS                 +  ++ +    +D+    +
Sbjct: 181 DFNNPTDQDGYQVIMGSPLDLQDSHKIADHIFGDHSIVADIDGWEDNKEAFKVDHVFTSK 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +          S I +   D       +SDH  + +  D+
Sbjct: 241 DFEIK-----ASHITFEGGDAPV----VSDHYGLEVTLDW 271


>gi|156389490|ref|XP_001635024.1| predicted protein [Nematostella vectensis]
 gi|156222113|gb|EDO42961.1| predicted protein [Nematostella vectensis]
          Length = 376

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 75/302 (24%), Gaps = 44/302 (14%)

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHS 102
               ++  + LL +  + L+ADI  LQE+        + K      +   Y  +      
Sbjct: 12  RDGISSRRHHLLTEEIRWLNADIFCLQELDDWYYNGIIDKFMDSLGYSGVYMKKADPKLD 71

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
                         +   V +      L G K           + + +E       +   
Sbjct: 72  GLAIFYRRSKFKKAKTDMVLLSDCIDKLTGDKKMTGYKTGHVLLMVALESLEDGSILAIG 131

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           +  S C L     T +      +Q        +    +  VP+V+ GDFN +  Y   N 
Sbjct: 132 NTHSLCHLGKHVITTTAQILCAAQAMLKFVQSLQSTTDDRVPYVLCGDFNIEPQYPIYNL 191

Query: 223 DFWKTIDPNDSLIRFPKEKDSRC------------------------------------- 245
               T++ +          D                                        
Sbjct: 192 LEEGTLNKDTLRQLDYIVPDPTFTVEDKLCKEEEKLLSLIEEHLTSSPLKVKSAYNRVLD 251

Query: 246 ----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                 +  L     +DY  +  +     + E       N           SDH  +  +
Sbjct: 252 KESGYTSYCLGQGSVLDYIWLSADIEPVSVLEVPKPDSINPHGAIPSNTYPSDHFSLKAE 311

Query: 302 YD 303
            D
Sbjct: 312 LD 313



 Score = 42.6 bits (98), Expect = 0.079,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 23/89 (25%)

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
           K + +  +        P+D      +        +  L     +DY  +  +     + E
Sbjct: 286 KPDSINPHGAIPSNTYPSDHFSLKAELDKESGYTSYCLGQGSVLDYIWLSADIEPVSVLE 345

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  N           SDH  +  + 
Sbjct: 346 VPKPDSINPHGAIPSNTYPSDHFSLKAEL 374


>gi|296130593|ref|YP_003637843.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM
           20109]
 gi|296022408|gb|ADG75644.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM
           20109]
          Length = 232

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 71/282 (25%), Gaps = 62/282 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R++++N+  L                  +   L    +    D++ +QE        
Sbjct: 7   GTLRVMTYNLRGL----------------REEVDALVDVVRAARPDVLAVQEPPRG---- 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
              P     +     R              TA+ V                         
Sbjct: 47  ---PTGRARLRRFAARTGMRVAVGGGGARTTALLV--------------------VPHRS 83

Query: 142 NRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R A  + +    G     +   L     +  +      +      Q   ++  +     
Sbjct: 84  VRGAAGIRLPWRLGLTRRGVSTALVDGVRVVVVHLGLRAAERSRHVQL--VRRHLLH--G 139

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P V+AGD N +         +    D    L       ++          ++ ID  
Sbjct: 140 DDGPVVVAGDLNERPGGSS----WLALRDAAGGLQDAASVAEADLPTFPADVPRVRIDAV 195

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++D+             +     D  + G   SDH P+ +D 
Sbjct: 196 LVDERLP---------VLGARVPDEAAVGV-ASDHRPLVVDL 227


>gi|195620624|gb|ACG32142.1| hypothetical protein [Zea mays]
          Length = 304

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 84/306 (27%), Gaps = 68/306 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  ++    ++++SWN+N L          +             +     + D++ LQE 
Sbjct: 39  PPLSTDTNSMKILSWNVNGLQAIVQSGFSAD-------------ELVARENFDVLCLQET 85

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   +F        Y+                ++  AV  +   +  Q    +   
Sbjct: 86  HLEERNVDLFKNLVHEYDYTCWSC------SVARLGYSGTAVISRVQPISVQYGLGIPEH 139

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D   R          + +     ++++ ++ +        N                 D+
Sbjct: 140 DQEGRL---------ITLEFDDFYLVNAYVPNSGRGLRRLNYRINDWDPCF------SDF 184

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPK 239
           I +  E   P ++AGD N     +  +                + ++       L+   +
Sbjct: 185 IKK-LECSKPVIVAGDLNCARQSIDIHNPQAKTEAAGFTIEERESFEVNFSRKGLVDTFR 243

Query: 240 EKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           ++     A                +DYF+  ++    +            D        L
Sbjct: 244 KQHPNAVAYTFWGENQRITNKGWRLDYFLASESIADKVH-----------DSYTLPDVAL 292

Query: 293 SDHCPI 298
           SDH PI
Sbjct: 293 SDHSPI 298


>gi|291395719|ref|XP_002714202.1| PREDICTED: TRAF and TNF receptor-associated protein [Oryctolagus
           cuniculus]
          Length = 347

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 86/285 (30%), Gaps = 50/285 (17%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           ++WNI+ L                      +  Y      D+VFLQE+            
Sbjct: 102 ITWNIDGLDLN-----------HLQERARGVCSYIALYSPDVVFLQEV-----------I 139

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             +C +                   TAI ++K  V++  Q                R  +
Sbjct: 140 PPYCSYIKKRASSYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPNT-----KMMRNLL 194

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
            +   ++G +++++  HL+S               +    Q + + + I +        +
Sbjct: 195 CVHASVSGNELYLMTSHLEST----------RGHATERMNQLKMVLEKIQE-APESATVI 243

Query: 207 IAGDFNRK-------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            AGD N +            N  D W+ +       ++  +     N   +   K+  D 
Sbjct: 244 FAGDTNLRDQEVAKCGGLPSNILDVWEFL-GKPKHCQYTWDTQMNSNLGISATCKLRFDR 302

Query: 260 FVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 A +  +I  S   +     +    G+  SDH  +  + D
Sbjct: 303 IFFRAAAEEGHIIPRSLDLLGL---EKLDCGRFPSDHWGLLCNLD 344


>gi|187479651|ref|YP_787676.1| catabolite repression control protein [Bordetella avium 197N]
 gi|115424238|emb|CAJ50791.1| catabolite repression control protein [Bordetella avium 197N]
          Length = 260

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 79/307 (25%), Gaps = 76/307 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +        +                +    +AD V +QE+ +  A    
Sbjct: 2   LRVISANLNGIRSANTKGFF---------------DWLHQQNADFVCVQELKAQEA---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          +      +    ++ + +   +          +   D+  R    
Sbjct: 43  ----DLSPAMKAPAPLQGYFHYAEKKGYSGVGIYTPHEPESVVIGLGVPDIDAEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E+   K+ V+ ++L S    D  +           +    L            
Sbjct: 96  ------IELVYPKLSVVSVYLPSGSSGDHRQTAKYRFMEHFYRHLADL-------IGRGR 142

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN- 246
             VI GD+N                             +  D    +  + +        
Sbjct: 143 EVVICGDWNIAHKEADLKNWKGNLKNSGFLPEERAWLTQVFDELKWVDVYRRLAPDATGE 202

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +          Q +             +  R SDH P
Sbjct: 203 GYTWWSNRGQAWAKNVGWRIDYHIASGALAATAQQAAI-----------YKDVRFSDHAP 251

Query: 298 ISIDYDF 304
           ++IDYDF
Sbjct: 252 LTIDYDF 258


>gi|72161943|ref|YP_289600.1| AP endonuclease [Thermobifida fusca YX]
 gi|71915675|gb|AAZ55577.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Thermobifida fusca YX]
          Length = 267

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 73/305 (23%), Gaps = 71/305 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
            + + + N+N L                 +      ++     AD+V LQE         
Sbjct: 3   SLVIATVNVNGLRA---------------AARKGFVEWLAGTKADVVCLQETRAELDQLP 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +V   + W +              +       +AV  +      +    +G   +    
Sbjct: 48  PEVAEPDGWHVVLVP----------AATKGRAGVAVYSRMKPDAVR----IGFGSAEFAD 93

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R      VE +   + V  ++L S      L+       +        L    T+ + 
Sbjct: 94  SGRY-----VEADFGPVSVASLYLPSGQVGTPLQEEKERFMAEFLPY---LVRRRTEVEA 145

Query: 201 SLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                 + GD+N                             +  +    +         +
Sbjct: 146 QGRELAVCGDWNIAHQEADLKNWRGNRKNSGFLPEERQWLSRVYEEAGYVDVVRALHPDQ 205

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           ID  V          +          +   S  +R SDH
Sbjct: 206 DGPYTWWSYRGRAFDNDAGWRIDLQVATPGLAARAQEAWV-------ERAPSHDQRWSDH 258

Query: 296 CPISI 300
            P+++
Sbjct: 259 APVTV 263


>gi|271967525|ref|YP_003341721.1| hypothetical protein Sros_6252 [Streptosporangium roseum DSM 43021]
 gi|270510700|gb|ACZ88978.1| hypothetical protein Sros_6252 [Streptosporangium roseum DSM 43021]
          Length = 298

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 80/289 (27%), Gaps = 24/289 (8%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76
           + +  + ++SWN+   +       +     R  +         + +  D++FLQE  S  
Sbjct: 22  TSSSAISVMSWNV--CAGTNPGCFFYGRDMREVAVKVAWYAVTQPIRPDVIFLQEFCSGG 79

Query: 77  YNAVAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
              +  +  + T   +       T +  +      +                   +    
Sbjct: 80  TATLESLLEQKTGRAWTVRSSILTVKGGSPKVCAPDRQGRPRGHTAVTVAVAGNAATFQA 139

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               S      R A+   +    +++ V   HL +        +   P      +Q + L
Sbjct: 140 HGLTSPPWYVKRMALCAAI--PARRVNVCGTHLSAGLS----YDDREPGAPFRRKQVEEL 193

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              +    +     V  GD N        +    + I           +++   +     
Sbjct: 194 ---LAAAAKPGYRAVFGGDLNLAPPDSRQSTAAKRRILAPVYAAYAECDQNGTRDGRWTE 250

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +      +   D +  K  +   F+          ++    SDH PI +
Sbjct: 251 K------HVREDGSVSKRKLDYLFAPRGSVTRCHVAQDAAPSDHRPIYV 293


>gi|46129427|ref|XP_389065.1| hypothetical protein FG08889.1 [Gibberella zeae PH-1]
          Length = 609

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/339 (14%), Positives = 90/339 (26%), Gaps = 78/339 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
            RL +WN   +    G        +R  S + +L       +ADIV +QE  +   + + 
Sbjct: 3   FRLTTWNGEFIHFFRGPHTNTFCSQRHQSMFDIL-------EADIVVMQETKIQQKDLLD 55

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR----------KKNVRVLQQSYPL 130
           ++     W +F+S  +    +S         T   +R                  +  P 
Sbjct: 56  EMVLVPGWDVFFSLPKHKKGYSGVAIYTRNSTCAPIRAEEGITGILTPPKSTTRYRDLPE 115

Query: 131 LGAKDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                 + R G    +  E  ++  G+ + +L+        + S  N             
Sbjct: 116 DQQIGGYPRPGQLDGIIDEATLDSEGRCV-ILEFPGFVLLGVYSPANRDETRDDFRLGFL 174

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------------NDDFWK 226
           Q L   I     +    V+ GD N   + + +                         F +
Sbjct: 175 QALDVRIRNLVAAGKQVVLTGDLNIVRSEVDSTNVSETLRKGNFDLNEWMNIPARRIFNQ 234

Query: 227 TIDPNDSLIRFPKEKDSRC----------------------NANKNLRNKIPIDYFVMDQ 264
            I     L    + + +                           +   N   IDY +   
Sbjct: 235 LIFEGSVLGERDQGRKAPVLWDLCRCFHPERAGMNTCWDTKRNTRPANNGSRIDYVLCSD 294

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +    +              G   SDHCP+   + 
Sbjct: 295 GIKSWFNFSNIQ-----------EGLMGSDHCPVFAIFS 322


>gi|281421494|ref|ZP_06252493.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           copri DSM 18205]
 gi|281404566|gb|EFB35246.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           copri DSM 18205]
          Length = 335

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 69/254 (27%), Gaps = 31/254 (12%)

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D V L E+ + + +  +  ++            ++   DS ++    +A+  +      
Sbjct: 89  PDFVALCEVENDSVLFDLTRRSALRGV-----NYDYVMTDSPDERGIDVALLYQPSSFAL 143

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             +  +  K        R  +     I N   + V  +H  S    +        S    
Sbjct: 144 IQFRSIRIKPLPDTRPTRDILYASGRIMNDDTLHVFVLHAPSRRGGE------QVSRPYR 197

Query: 185 SQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
            Q A  L   +            ++AGDFN   +       +   +      ++      
Sbjct: 198 LQVASQLVSAVDSIYALNDSARIIVAGDFNDYSDSPALCYLYQHHLVNISVGVKGSHGAK 257

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI--------------LYNEDDIKSR 288
           +     +   +   +D  +   +  +  +     ++               +        
Sbjct: 258 A---TYRWHGDWRSLDQILFSPSLSRLKMSCQIGDLPFLLEDDEKYGGKKPFRTYLGPRY 314

Query: 289 GKRLSDHCPISIDY 302
               SDH P+   +
Sbjct: 315 LGGYSDHLPLVAKF 328


>gi|17988584|ref|NP_541217.1| dioxygenase [Brucella melitensis bv. 1 str. 16M]
 gi|256043927|ref|ZP_05446845.1| dioxygenase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260565101|ref|ZP_05835586.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. 16M]
 gi|265990345|ref|ZP_06102902.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|17984384|gb|AAL53481.1| dioxygenase [Brucella melitensis bv. 1 str. 16M]
 gi|260152744|gb|EEW87837.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. 16M]
 gi|263001014|gb|EEZ13704.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 285

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 67/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIALQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLRESVVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSALQ--EA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 181 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATAVPSFPSRFPVLALDR 230

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              + I   E       +  SDH PI    D
Sbjct: 231 VL----------GAPDNLITSVEVHNTPLARLASDHLPIKAHLD 264


>gi|194219348|ref|XP_001498739.2| PREDICTED: similar to Deoxyribonuclease I-like 2 precursor (DNase
           I-like 2) (DNase I homolog protein DHP1) [Equus
           caballus]
          Length = 302

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 83/301 (27%), Gaps = 39/301 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A  +R+ ++NI +           +S     +   ++ Q       D+  +QE+   +  
Sbjct: 19  AAGLRIGAFNIQSFG---------DSKVSDPACGGVIAQILAGY--DVALVQEVRDPDLS 67

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           AV+ +  +      +    + +                RK  V V+              
Sbjct: 68  AVSALMEQINSVSRHEYSFVSSEPLGRDQYKEMYLFVYRKDAVSVV-----DTYQYPDPE 122

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS------------Q 186
            A +R    +                 S           +P+   L              
Sbjct: 123 DAFSREPFVVKFSAPSSGEAPPPKLPASPPHPRHXHPPATPAAKELVLIPLHAAPHHAVV 182

Query: 187 QAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           +   L D      +       +  GDFN   +Y+   D     +  ++       +    
Sbjct: 183 EIDALYDVYLDVIDKWGTDDILFLGDFNADCSYVREEDWAAIRLRSSEVFKWLIPDSADT 242

Query: 245 CNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISID 301
              N +       D  V+      + L  +S +   + E+    + + L  SDH P+ + 
Sbjct: 243 TVGNSDCAY----DRIVVCGARLRRSLKPQSAAVHDFQEEFGLDQTQALAISDHFPVEVT 298

Query: 302 Y 302
            
Sbjct: 299 L 299


>gi|88798528|ref|ZP_01114112.1| endonuclease/exonuclease/phosphatase family protein [Reinekea sp.
           MED297]
 gi|88778628|gb|EAR09819.1| endonuclease/exonuclease/phosphatase family protein [Reinekea sp.
           MED297]
          Length = 273

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 89/290 (30%), Gaps = 59/290 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEM 74
             ++L+S+NI           +            R  ++   + +  ++   D++ LQE+
Sbjct: 31  NTLKLLSYNIQVGIHTRRYHDYLLRSWQHFLPHHRRENNLQQIAELIRHF--DLIALQEV 88

Query: 75  GSYNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
              +  ++   +  +    +  +       R+       +  V      V   ++ L G 
Sbjct: 89  DGGSFRSQFTNQIHYLAKAADKQFWHQQLNRNLGRMAQHSNGVIGDVTPVRVSNHALPGI 148

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           K        R A+   +      + ++  HL        L             Q +++++
Sbjct: 149 KG-------RGAIAFEL-GEKDPLIIVIAHLALGKKHQDL-------------QLKYIRN 187

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            I Q   +    +I GD N             + +  +       K   +R     + + 
Sbjct: 188 IIRQYNHA----IIMGDLNTDS---------LRILYDSPLHDCGLKASHARA-TYPSWQP 233

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +D  ++ Q+                   +      +SDH P++I+ +
Sbjct: 234 SKCLDQILVSQHII--------------IHKVGVLDFMMSDHLPVAIEIE 269


>gi|332637180|ref|ZP_08416043.1| exodeoxyribonuclease III [Weissella cibaria KACC 11862]
          Length = 276

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 83/312 (26%), Gaps = 77/312 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           ++ +SWNI         +  ++   R    + +L+        D++ +QE          
Sbjct: 1   MKFISWNI-----DSVNAAVEHKSARGEMTWQVLQD-IAAEQPDVLAIQETKLKATGLTK 54

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               A+ ++FP     +  S           +    ++   +  K   +  +  P++GA 
Sbjct: 55  KQATALDELFPGYHRYLRMS-----------TGRSGYSGTMMLSKVEPIAVE-MPVIGAP 102

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D     G       ++ +  +  +V  ++  +                        L   
Sbjct: 103 DEMDIEGR------IITLEFENTYVSTVYTPNSGSNLDRLTDRQAWDDAYRAYIADL--- 153

Query: 195 ITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPK 239
                ++  P + +GDFN                         + +  +        F  
Sbjct: 154 -----DAKKPVIFSGDFNVAHQEIDLKNPKTNHKSAGFTDEEREKFGLLLDAGFTDTFRY 208

Query: 240 EKDSRCNANKNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +                  +   IDY++        L   S  +    +       
Sbjct: 209 LNPDQTGVYTWWAQISKTSKINNSGWRIDYYLASNRLNDQLATFSVVDTGARQ------- 261

Query: 290 KRLSDHCPISID 301
               DH PI ++
Sbjct: 262 ----DHAPIKLE 269


>gi|307708912|ref|ZP_07645372.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK564]
 gi|307620248|gb|EFN99364.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK564]
          Length = 271

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 79/281 (28%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEITSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     S        + L            P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQGEWARFESV------LKELNK----------PLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYIFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Q                +     ++  ++SDH  ++   ++
Sbjct: 239 QELA---------VEHLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|225444482|ref|XP_002268030.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 413

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 79/301 (26%), Gaps = 53/301 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++S+N+    E   +                L    +    D++  QE+        
Sbjct: 144 SLKILSYNV-WFREDLEM----------DKRMQALGDLIQLHSPDLICFQEVT------- 185

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
               N + +F  +     +     N   H       +  K              K   + 
Sbjct: 186 ---PNIYDVFQQSCWWKVYRCSVPNEMAHLRPYFCMLLSKLPVKS------FSCKRFSNS 236

Query: 140 AGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              R      +E+  GK + +   HL+S C                  QA+   + +   
Sbjct: 237 IMGRELCIAELEVQAGKPLVLATSHLESPCPAPPKW--DQMYSKERVDQAKEALNLL--- 291

Query: 199 KESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                  +  GD N      G     +       D       +  +  S    + N   +
Sbjct: 292 -TKNPNVIFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGNRTLQ 350

Query: 255 IPIDYFVMD-QNAYKFLIQ----ESFSEILYNEDDIKSRGKR-------LSDHCPISIDY 302
             +D F+    +     I     E    + Y ++    +  +        SDH  + +  
Sbjct: 351 KRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 410

Query: 303 D 303
            
Sbjct: 411 S 411


>gi|153853182|ref|ZP_01994591.1| hypothetical protein DORLON_00576 [Dorea longicatena DSM 13814]
 gi|149753968|gb|EDM63899.1| hypothetical protein DORLON_00576 [Dorea longicatena DSM 13814]
          Length = 349

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 96/321 (29%), Gaps = 64/321 (19%)

Query: 17  TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           + S    + ++++N                G  +   +      +   +     + DAD+
Sbjct: 47  SISTGDSMTILTYNTGYAGLSKDEDFFMDGGSKVMPETKDLVKHNMKGIAGILNDADADV 106

Query: 69  VFLQEMGSYNAVAKVFPKNTWC---------------IFYSTERLINHSKRDSNNDIHTA 113
            FLQE+   +  +    +  +                  Y    L    K +S    ++ 
Sbjct: 107 CFLQEVDIDSKRSYHINEKAYYEKALGVDGIFACNFKCVYVPYPLPTIGKVESGLVTYSD 166

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             V + +   L +S+       +  R        + ++ + K++ +++ HL+++      
Sbjct: 167 CKVSEASRIALPESFKWPVKTCNLKRCMLE--TRIPIKGSDKELVLINFHLEAY------ 218

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI----- 228
                 S      Q + L   + ++ E     +  GDFN+  + +       K       
Sbjct: 219 -----DSGEGKIAQRKVLVKKLKEEYEKGNYVIAGGDFNQTFDGMDTYPIHDKDSWVPGK 273

Query: 229 ----DPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
               D  +       +    C         N +      +D F++  N     ++   ++
Sbjct: 274 VGKEDIPEGFSYAVSDNVPTCRLLNGPYSGNYDDSQVYVLDGFIVSDNLKIDQVENIDTQ 333

Query: 278 ILYNEDDIKSRGKRLSDHCPI 298
             Y             DH P+
Sbjct: 334 FEYT------------DHQPV 342


>gi|92116447|ref|YP_576176.1| endonuclease/exonuclease/phosphatase [Nitrobacter hamburgensis X14]
 gi|91799341|gb|ABE61716.1| Endonuclease/exonuclease/phosphatase [Nitrobacter hamburgensis X14]
          Length = 292

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 71/281 (25%), Gaps = 58/281 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAKVF 84
           + S+NI+           K   +    D     +  K +  DI+ LQE          + 
Sbjct: 49  IASYNIH-----------KGVGRDRRFDPHRTVRVIKEIQPDIIALQEADRRFGDRRSLL 97

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                    S   +     +  +      I  R+ +V    Q                R 
Sbjct: 98  DIQALKSECSLVPVPLEFSQGGHGWHGNVILYREGSVTATHQV--------KLPGFEPRG 149

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           A+ + +++    + ++  HL                    + Q   L        +   P
Sbjct: 150 ALVVDLDLPSGPLRIVAAHLGLL-------------RRSRALQVAALLSIAE--PQDDRP 194

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD--SRCNANKNLRNKIPIDYFVM 262
            ++ GD N            W+  D +      P      +   +       + +D  + 
Sbjct: 195 VLLVGDLNE-----------WRLGDKSTLHGLAPGFGPLHAPIPSFPARFPMLALDRILG 243

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +     +                  +  SDH P+    D
Sbjct: 244 YPHGLISSVA----------LHDTPLARIASDHLPLKAVID 274


>gi|147789500|emb|CAN69587.1| hypothetical protein VITISV_019797 [Vitis vinifera]
          Length = 632

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/352 (11%), Positives = 97/352 (27%), Gaps = 86/352 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++V++N+N L  +                +  L ++  +LDADI+ +QE  +  +   A
Sbjct: 1   MKIVTYNVNGLRPRIS-------------QFGSLLKFLSSLDADIICVQETKLSRHELTA 47

Query: 82  KVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAK 134
            V   + +  F+S     ++  + +S   +   + +A +  +  + +  +     LL   
Sbjct: 48  DVVMADGYESFFSCTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKS 107

Query: 135 DSFSRAGNRRAVELL--------------------VEINGKKIWVLDIHLKSFCFLDSLE 174
             F    +   V+                      +  +G      +  +    +    +
Sbjct: 108 GGFGTGKDEIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFADYGNWPVLFNIYGPRAD 167

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------ND 222
           +  +          Q L+      ++      + GD N     +                
Sbjct: 168 SEDTERIQFKHTFFQILQKRWETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRR 227

Query: 223 DFWKTI-------DPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQN------ 265
            F   +                 + +   C ++            ID+ +   +      
Sbjct: 228 WFRSMLVECGGPFFDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDH 287

Query: 266 AYKFLIQESFSEILYNEDDIKSRGK---------------RLSDHCPISIDY 302
             +  I  +      +      R K                 SDH P+ +  
Sbjct: 288 CLQDRIFVTCHVKECDILTQFKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSL 339


>gi|29501194|dbj|BAC67539.1| DNA lyase [Isaria tenuipes]
          Length = 607

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 77/326 (23%), Gaps = 80/326 (24%)

Query: 38  EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYST 95
           +  + +     R    +  +    +   ADIV LQE  +   +    +     W +++S 
Sbjct: 4   DFRNPFGYQPWREKRTFQAMFDILE---ADIVILQETKIQRKDLQDDMVLVPGWDVYFS- 59

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKN-----------VRVLQQSYPLLGAKDSFSRAGNRR 144
             L  H K  S   I+T  A                       Y                
Sbjct: 60  --LPQHKKGYSGVAIYTKNATCAPILAEEGILGILCPPKSNTPYREQPEDRQIGGYPTLA 117

Query: 145 AV-----ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            +     E L++  G+ + +L+        + S  N             + L+  I    
Sbjct: 118 QLSGDVDEALLDSEGRCL-ILEFPAFVLFGVYSPANRDESRIEFRQSFVEALEARIRNLI 176

Query: 200 ESLVPFVIAGDFNR----------------------KINYLGNNDDFWKTIDPNDSL--- 234
            +    ++ GD N                       +   +       + +     +   
Sbjct: 177 AAGKQVILTGDLNIIRSEMDSSNVAEGLKKEGMTMEEWQSMPTRRILNQLLFDGSVIGPR 236

Query: 235 ---------------IRFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESF 275
                              +     C   K           IDY +       + +  + 
Sbjct: 237 DKAREDGVLWDICRCFHPTRRGMHTCWDTKRNTRPANLGSRIDYILCSDGIKDWFVDSNI 296

Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301
                        G   SDHCP+   
Sbjct: 297 Q-----------EGLMGSDHCPVYAT 311


>gi|241666690|ref|YP_002984774.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240862147|gb|ACS59812.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 271

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 79/289 (27%), Gaps = 56/289 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              A  + + S+N++     +              D     +    + AD++ LQE  + 
Sbjct: 32  PPTAGTL-IASYNVHKCIGTDRRF-----------DPERTSRVIHEIGADVIALQEADTR 79

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                           +    +  +     +  H  + + KK +        L G     
Sbjct: 80  FGERTGILDLGRLERETGLIAVPIAGMAKAHGWHGNVVLFKKGLVHDVHQVKLPGL---- 135

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                R A+   +E+  G  + ++  H                     +QQA+ L + I 
Sbjct: 136 ---EPRGALVAEIELEKGGVLRIIAAHFGLLRHS-------------RAQQARMLVELIN 179

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N         +         ++             +       + 
Sbjct: 180 D--RHEMPTILLGDLN---------EWRLGDRSSLNTFQSAFGPLPPAVPSFPAGLPLLA 228

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDYD 303
           +D  + ++             I   E       +  SDH PI   ID +
Sbjct: 229 LDRIIANRKG----------IISEVEAHDTPLARIASDHLPIKALIDLE 267


>gi|163735903|ref|ZP_02143331.1| hypothetical protein RLO149_08056 [Roseobacter litoralis Och 149]
 gi|161390839|gb|EDQ15180.1| hypothetical protein RLO149_08056 [Roseobacter litoralis Och 149]
          Length = 263

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 74/275 (26%), Gaps = 50/275 (18%)

Query: 55  TLLRQYAKNLDADIVFLQEMGS------------------------YNAVAKVFPKNTWC 90
             L  Y      D++ LQE+                          +  VA+  P++T  
Sbjct: 12  EALVPYVAESAPDVLCLQEVVHSPISEKDWLTYRDGDHILPQRANFFRDVARALPEHTAT 71

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRAGNRRAVE 147
              + + ++    +   +    A  V K    + Q     +             +R A  
Sbjct: 72  FCPAAQGVLWDEDQSFPSQWGLATFVHKSIPIIGQVQGFVHKGYSPVGYGDHPRSRSAHG 131

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           + V        +   H+         +          ++QAQ L        E     ++
Sbjct: 132 IRVYDYNSDRCISVTHMH-----GLRDLNGKMDTPERAEQAQRLLALSRHISEPGDLRIV 186

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
            GDFN + +      +  + +              +     +  ++    DY ++     
Sbjct: 187 CGDFNVEPHS-----ETLEILGAAGLSELVTGRGFTSTRNTQYKKSGKFADYMLISDA-- 239

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         ++        +SDHCP+ +  
Sbjct: 240 -----------DAVQEFNVVYNPEVSDHCPLVLTI 263


>gi|332359150|gb|EGJ36971.1| RgfB protein [Streptococcus sanguinis SK49]
          Length = 271

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 66/277 (23%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPIAPREV--LVSEANDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E     +                +  +   P V+ 
Sbjct: 136 ETEVEGQLLTIASCHLSWWDKGFQGEWAKLEA----------------ELLKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHTAAKEASGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|886278|gb|AAB00496.1| DNL1L [Homo sapiens]
          Length = 302

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 73/301 (24%), Gaps = 40/301 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+F ++      AQ  R+ ++N   L+          +          L +       D
Sbjct: 6   ALLFLILAN---GAQAFRICAFNAQRLTL---------AKVAREQVMDTLVRILARC--D 51

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVL 124
           I+ LQE+   +  A          F  +      S        +        R    +VL
Sbjct: 52  IMVLQEVVDSSGSAIPLLLREINRFDDSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVL 111

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSC 181
                     +       R        +       + ++ +H         L   Y    
Sbjct: 112 SSYVY-----NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFL 166

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +                      ++ GDFN     L         +    S      + 
Sbjct: 167 EVSQHW-------------QSKDVILLGDFNADCASLTKKRLDKLELRTEPSFHWVIADG 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +              +   +  +     L   +  +   +    +     +SDH P+ ++
Sbjct: 214 EDTTVRASTHCTYDRV--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVE 271

Query: 302 Y 302
            
Sbjct: 272 L 272


>gi|115353211|ref|YP_775050.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria AMMD]
 gi|172062083|ref|YP_001809735.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6]
 gi|115283199|gb|ABI88716.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria AMMD]
 gi|171994600|gb|ACB65519.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6]
          Length = 257

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 84/307 (27%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +               ++    +AD V +QE  + + +  A
Sbjct: 2   MRVITANLNGIRSAAKKGFF---------------EWLGEQNADCVCVQEIKVSADDLPA 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                +    ++       +S     +       +              +G   S     
Sbjct: 47  DFVEPHGLRSYFHHAEKKGYSGAGMYSRHEPDDVI--------------IGFGSSEFDPE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ V+ +++ S    +  +                L        +S
Sbjct: 93  GRY-----VEARYGKLSVVSVYVPSGSSGEERQQAKYRFMDEFMPHLAEL--------KS 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N     +   +                +   +  +   +   +  D R  
Sbjct: 140 KREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTQLFDDVGYVDVFRTLDPRPE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +          + S             +  + SDH P
Sbjct: 200 QYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKRTSI-----------FKDIKFSDHAP 248

Query: 298 ISIDYDF 304
           +++DYD+
Sbjct: 249 LTVDYDY 255


>gi|294854009|ref|ZP_06794681.1| endonuclease/exonuclease/phosphatase [Brucella sp. NVSL 07-0026]
 gi|294819664|gb|EFG36664.1| endonuclease/exonuclease/phosphatase [Brucella sp. NVSL 07-0026]
          Length = 285

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/284 (10%), Positives = 66/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIALQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLREGVVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSALQ--EA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 181 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATAVPSFPSRFPVLALDR 230

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +   +        S               +  SDH PI    D
Sbjct: 231 VLGAPDNLI----TSVKVHNT------PLARLASDHLPIKAHLD 264


>gi|254282366|ref|ZP_04957334.1| exodeoxyribonuclease III [gamma proteobacterium NOR51-B]
 gi|219678569|gb|EED34918.1| exodeoxyribonuclease III [gamma proteobacterium NOR51-B]
          Length = 259

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 83/305 (27%), Gaps = 78/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N N +   E    +                +     AD+V +QE          
Sbjct: 1   MRVITCNTNGIRAAERKGFF---------------SWLGQQGADVVCIQETKAQEQQLTD 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    +  FY+      +S         TA+  R K  RV+          +      
Sbjct: 46  DAFYPEGYHCFYNDAEKKGYSG--------TALYCRSKPQRVITSLGWDPADSEGRY--- 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   ++ +   I V+ ++L S    D  +              + L+         
Sbjct: 95  --------LQADFPGISVVSLYLPSGSSGDERQVRKEVFMDAFFDHLKALRR-------K 139

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
              F+I  D+N     +   +                +   +      +   +  +   +
Sbjct: 140 RREFIICADWNICHREIDLKNWRANRKNSGFLPHERAWLDRVFDELGYVDSFRRVNPEPD 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           +DY ++           S             R +R SDH P
Sbjct: 200 QYTWWSNRGQAWAKNVGWRLDYMLVTPGLADAATSASI-----------YREERFSDHAP 248

Query: 298 ISIDY 302
           +++D+
Sbjct: 249 LTLDF 253


>gi|209878352|ref|XP_002140617.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
 gi|209556223|gb|EEA06268.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
          Length = 504

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 76/247 (30%), Gaps = 20/247 (8%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +  +++N   L  +        +   T      +    +N++ADIV LQE+      
Sbjct: 9   PESLSFLTFNAGLLEYRLCGIKLYQNPPYTAHRLLQIPSAIRNINADIVALQEVFDSKHS 68

Query: 81  AKVFPKNTWCIFYSTE-------------RLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
             +         +                R    S   +   +H  + V  K   +  + 
Sbjct: 69  DYLIESLLPMYPFYARETKHNRNKSRGILRWRPLSIIQNKLALHNGLLVLSKYPILHAKF 128

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
                         N+  +E+ +++ G     + + +IH+ S     ++         L 
Sbjct: 129 TCFNDVTLIEKWLVNKGMLEVSIDLPGMKNSPLTLFNIHMASG----AVNPESEIIEHLR 184

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           +++ + L D   +        +I GD N      G+N   +      D      KE    
Sbjct: 185 NKEIEQLLDACDRAIRRGEIPMIIGDLNAAPTCCGSNYQCFTDRGWRDCFNVIDKESHFP 244

Query: 245 CNANKNL 251
             ++ + 
Sbjct: 245 TKSHPHY 251


>gi|4503347|ref|NP_001365.1| deoxyribonuclease-1-like 2 precursor [Homo sapiens]
 gi|2494172|sp|Q92874|DNSL2_HUMAN RecName: Full=Deoxyribonuclease-1-like 2; AltName: Full=DNase I
           homolog protein DHP1; AltName: Full=Deoxyribonuclease
           I-like 2; Short=DNase I-like 2; Flags: Precursor
 gi|1518784|gb|AAB63981.1| DNase 1 homolog [Homo sapiens]
 gi|23270879|gb|AAH35205.1| DNASE1L2 protein [Homo sapiens]
 gi|34500280|gb|AAQ73761.1| deoxyribonuclease I-like 2 long form [Homo sapiens]
 gi|39645606|gb|AAH63710.1| Deoxyribonuclease I-like 2 [Homo sapiens]
 gi|119605932|gb|EAW85526.1| deoxyribonuclease I-like 2, isoform CRA_a [Homo sapiens]
 gi|119605933|gb|EAW85527.1| deoxyribonuclease I-like 2, isoform CRA_a [Homo sapiens]
 gi|119605935|gb|EAW85529.1| deoxyribonuclease I-like 2, isoform CRA_a [Homo sapiens]
 gi|193783655|dbj|BAG53566.1| unnamed protein product [Homo sapiens]
          Length = 299

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 80/296 (27%), Gaps = 35/296 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVA 81
           +R+ ++NI +  + +       S+         + +       D+  +QE+   +  AV+
Sbjct: 22  LRIGAFNIQSFGDSKVSDPACGSI---------IAKILAGY--DLALVQEVRDPDLSAVS 70

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  +      +    + +                RK  V V+                 
Sbjct: 71  ALMEQINSVSEHEYSFVSSQPLGRDQYKEMYLFVYRKDAVSVVDTYLYPDPE-----DVF 125

Query: 142 NRRAVELLVEINGK-----KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +R    +     G       +              +      P  +   Q    +     
Sbjct: 126 SREPFVVKFSAPGTGERAPPLPSRRALTPPPLPAAAQNLVLIPLHAAPHQAVAEIDALYD 185

Query: 197 QKKE-----SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              +          +  GDFN   +Y+   D     +  ++       +       N + 
Sbjct: 186 VYLDVIDKWGTDDMLFLGDFNADCSYVRAQDWAAIRLRSSEVFKWLIPDSADTTVGNSDC 245

Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304
                 D  V       + L  +S +   + E+    + + L  SDH P+ +   F
Sbjct: 246 AY----DRIVACGARLRRSLKPQSATVHDFQEEFGLDQTQALAISDHFPVEVTLKF 297


>gi|309800613|ref|ZP_07694757.1| exodeoxyribonuclease III [Streptococcus infantis SK1302]
 gi|308115759|gb|EFO53291.1| exodeoxyribonuclease III [Streptococcus infantis SK1302]
          Length = 269

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 73/279 (26%), Gaps = 54/279 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + LL Q       D++  QE+      A+V     +    S                
Sbjct: 17  EQKFQLLLQDILENSYDLICFQEINQEITSAQVETAPLYQPLPSAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LAEHGQNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              + GK++ V  +HL  +      E     +        + L   +          ++A
Sbjct: 135 ETVVEGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNKSL----------LLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-----NKNLRNKIPIDYFVMD 263
           GDFN      G        +D  D+     +   S          K     + IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLDLQDAYEVAKERSGSYTVPPEIDGWKGNSEPLRIDYIFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++               +         ++SDH  +  + 
Sbjct: 239 KD---------VQVEKLHVVFDGKNSPQVSDHYGLQAEL 268


>gi|294644605|ref|ZP_06722358.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294810347|ref|ZP_06769008.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|292640042|gb|EFF58307.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294442455|gb|EFG11261.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 336

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/334 (11%), Positives = 83/334 (24%), Gaps = 54/334 (16%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDY 54
           VLAL   +            +  +N+  L +        +           +  +  +  
Sbjct: 5   VLALFVLMAYGQEKKFALYSVAFYNMENLFDTIHDEGKNDYEYLPNGTNQWNTMKYKAKL 64

Query: 55  TLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
             + +    L  D       I+ + E+ +Y  +  +  +              H +    
Sbjct: 65  KNMSEILSMLSTDKLPMGPAIIGVSEIENYRVLEDILKQP---ALADRGYQYVHYEGADQ 121

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
             +  A     K   +      +     + +    R  +     I G+K+  +  H  S 
Sbjct: 122 RGVDCAFFYNPKLFELTNSKL-VPYVYINDTVHKTRGFLIASGNIAGEKMHFIVNHWPSR 180

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                +             Q + +KD +  +++S    VI GD N               
Sbjct: 181 AAASPVRERAGE-------QVRAIKDSL-LREDSAAKIVIMGDMNDDPMDKSMAVALGAK 232

Query: 228 -----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILY 280
                + P D    +                    D  V   N         + +   ++
Sbjct: 233 RKPADVGPTDLYNPWWDTLKKGYGTLMYKGKWNLFDQIVFTGNLLGTDRSTLKFYKHEIF 292

Query: 281 NEDDIKSRGKR-----------------LSDHCP 297
             D +  +  +                  SDH P
Sbjct: 293 RRDFMFQKEGKYKGYPKRTQAGGVWLNGYSDHLP 326


>gi|167820132|ref|ZP_02451812.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 91]
          Length = 278

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 65/258 (25%), Gaps = 45/258 (17%)

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
                T S    +      L AD++ LQE+    A           +   T         
Sbjct: 3   GLGAWTASAAERIAVVLDELCADVIALQEVPLGGARGADV---LAHLRACTGMHAAEGPT 59

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
                     AV  +      +   L     SF     R A++  +E     + V+  HL
Sbjct: 60  IDTPARRYGNAVLSRFPIRAARMLDL-----SFGNREPRGALDADIECGFGVLRVVATHL 114

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
                          S +  S Q   L   +       +P ++ GD N         + F
Sbjct: 115 GL-------------SATERSAQVARL---LAAFDTRALPVILLGDIN---------EWF 149

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
            +       +  F +    R            +D   +     ++L+  +          
Sbjct: 150 VRGRALRALVTHFRRAPAPRTFPTLCPLFS--LDRIWVHPG--EWLVDVAAHRSARARRA 205

Query: 285 IKSRGKRLSDHCPISIDY 302
                    DH P+    
Sbjct: 206 S--------DHYPLVARI 215


>gi|116252933|ref|YP_768771.1| exo/endo phosphatase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257581|emb|CAK08678.1| putative exo/endo phosphatase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 369

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/366 (12%), Positives = 99/366 (27%), Gaps = 85/366 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YTLL--RQYAKNLD----- 65
            +RL ++N+  L  +   + ++N +++              Y  L   +     D     
Sbjct: 2   SLRLATFNVENLLTRFDFTGFRNQLRQDRVIKLFQVSSEGVYQQLEQARVIAATDDTRQM 61

Query: 66  ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                    ADI+ LQE+ +  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  SALAIADADADILCLQEIDNMAALQAFEYGYLFRMVGNGYRQKYLVEGNDSRGIDVAVLM 121

Query: 117 RK------KNVRVLQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKI 157
           R+      K      +S+ +   +D                +   R  +EL + I G+  
Sbjct: 122 REETRDGQKIELRDIRSHAMTTYRDLDLFNEELALTNRIDDKIFKRDCLELDLLIGGRPF 181

Query: 158 WVLDIHLKSFCFLDSLENTYS----PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
            +  +H KS        +          +      + ++D    ++     F I GD N 
Sbjct: 182 SLYVVHFKSMGNPRDGLDGRQSTMPIRRAEARAVRRIIEDRFGAEQAGTKSFAICGDMND 241

Query: 214 ----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255
                             +                +     + +        + R     
Sbjct: 242 YQERVDVIGRRGTGYRFEHQNETESALDVFSSDGFAENVVRRREPLDRWTLYHARGPQEQ 301

Query: 256 ---PIDYFVMDQNAYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCP 297
               +DY  +               I               +           + SDHCP
Sbjct: 302 WLCQLDYLWLSPALAAHNAGRLPEIIRSGQPYRTIFPPGQEVERYPRTGWDRPKASDHCP 361

Query: 298 ISIDYD 303
           + +  D
Sbjct: 362 VVMTLD 367


>gi|302518572|ref|ZP_07270914.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SPB78]
 gi|302427467|gb|EFK99282.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SPB78]
          Length = 253

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 69/280 (24%), Gaps = 58/280 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++S+NI                     D   L +  +  D D+V +QE   +    K 
Sbjct: 25  VRVLSYNIR----------------SMRDDTAALGRVIRACDPDLVLIQEAPRFFRWRKA 68

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +          R                  +      V +    LL       R   R
Sbjct: 69  LARLA--------RSAGLVTLAGGATAAGPALLCSLRATVERTEDVLLPLTPGLHR---R 117

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V     ++ V+  HL             S +      QA+ L +   +      
Sbjct: 118 GFSTAVVRFGAARLGVVSCHL-------------SLAKDERLAQARLLTERAERLGAPH- 163

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++ GD N             +  D         +   +  N          ID   + 
Sbjct: 164 -VLVGGDLNEGPEGKAFRHVAGRLRDAWAVRPWGGEFTSTAENPY------QRIDAMFVS 216

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDY 302
           +             +      ++    R  SDH P+    
Sbjct: 217 E---------GVEVLGCGVPTLEDADVRAASDHVPVLAVL 247


>gi|261856796|ref|YP_003264079.1| endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus
           c2]
 gi|261837265|gb|ACX97032.1| Endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus
           c2]
          Length = 243

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 79/281 (28%), Gaps = 54/281 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNI+    ++              D   + +  + +DAD++ LQE+   +    +
Sbjct: 3   LTVATWNIHAGIGRDR-----------RLDLARIWRVIELIDADLIGLQEVVLTDLHDDL 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      Y+T  +   +     +  +    +  +     Q S  L            R
Sbjct: 52  LIRWAQAAGYATHFVTTRAGPLPGS--YFGNMLLSRLPLTEQPSLDLSVPGR-----ERR 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           + +   V    +++ +   HL    +                 Q + +       +    
Sbjct: 105 QLLCAEVTHQSQRLAIWVAHLGLKRW-------------ERRYQVERIHAHAHAHRAGDH 151

Query: 204 PF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
           P   ++ GDFN      G      ++    +              +    R  + +D   
Sbjct: 152 PTHRLLIGDFNEWWPGPGTLRSLHQSFRRLN-----------TPASFPAHRPFMALDAIW 200

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +              E +  +       +  SDH PI    
Sbjct: 201 L----------AGAIEFIRQDAIDHPLVRIASDHRPIRAQI 231


>gi|328881833|emb|CCA55072.1| hypothetical protein SVEN_1785 [Streptomyces venezuelae ATCC 10712]
          Length = 248

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 76/290 (26%), Gaps = 58/290 (20%)

Query: 14  VPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +P + + A     +R++S+N+                     D   L +  +  D D+VF
Sbjct: 6   LPNSRTEADGSAVLRVLSYNVR----------------SMRDDEDALARVIRACDPDLVF 49

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +QE   +    K   +               +           + +      V +    L
Sbjct: 50  VQEAPRFFRWRKHAARLAAKSELVMLSGGATAAG--------PMLLCSLRATVERTEDVL 101

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L       R   R     +V   G ++ ++  HL                      QA  
Sbjct: 102 LPLTPGLHR---RGLATAVVRFAGARVGLVSCHLSLRQ-------------DERYAQAGM 145

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + D +          ++AGD N             +  D  +      +   +  + +  
Sbjct: 146 VLDRVAAL--GTPYALVAGDLNEGPGGPAFRRLAKELQDGWEVSPWGGEHTSTPADPH-- 201

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 ID  +             F       D   +  +  +DH P+  
Sbjct: 202 ----QRIDAILATPG-------VEFLGCGVPTDLDPADLRAATDHLPVLA 240


>gi|302144127|emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 79/301 (26%), Gaps = 53/301 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++S+N+    E   +                L    +    D++  QE+        
Sbjct: 692 SLKILSYNV-WFREDLEM----------DKRMQALGDLIQLHSPDLICFQEVT------- 733

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
               N + +F  +     +     N   H       +  K              K   + 
Sbjct: 734 ---PNIYDVFQQSCWWKVYRCSVPNEMAHLRPYFCMLLSKLPVKS------FSCKRFSNS 784

Query: 140 AGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              R      +E+  GK + +   HL+S C                  QA+   + +   
Sbjct: 785 IMGRELCIAELEVQAGKPLVLATSHLESPCPAPPKW--DQMYSKERVDQAKEALNLL--- 839

Query: 199 KESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                  +  GD N      G     +       D       +  +  S    + N   +
Sbjct: 840 -TKNPNVIFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGNRTLQ 898

Query: 255 IPIDYFVMD-QNAYKFLIQ----ESFSEILYNEDDIKSRGKR-------LSDHCPISIDY 302
             +D F+    +     I     E    + Y ++    +  +        SDH  + +  
Sbjct: 899 KRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 958

Query: 303 D 303
            
Sbjct: 959 S 959


>gi|242054697|ref|XP_002456494.1| hypothetical protein SORBIDRAFT_03g037250 [Sorghum bicolor]
 gi|241928469|gb|EES01614.1| hypothetical protein SORBIDRAFT_03g037250 [Sorghum bicolor]
          Length = 325

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 87/310 (28%), Gaps = 68/310 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   +    ++++SWN+N L          +             +     + D++ LQE 
Sbjct: 60  PPLGTDTNCMKILSWNVNGLQTIVQSGFSAD-------------ELVGRENFDVLCLQET 106

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   +F           E    +         ++  AV  +   +  Q    +   
Sbjct: 107 HLQERNVDLFKN------LVPEYDYTYWSCSVARLGYSGTAVISRVQPISVQYGLGVPEH 160

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D   R          + +     ++++ ++ +        N                 D+
Sbjct: 161 DQEGRL---------ITLEFDDFYLVNAYVPNSGRGLRRLNYRVNEWDPCF------SDF 205

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPK 239
           I + + S  P ++AGD N     +  +                + ++    ++ LI   +
Sbjct: 206 IKKLESSK-PVIVAGDLNCARESIDIHNPQAKTEAAGFTVEERESFEENFSSEGLIDTFR 264

Query: 240 EKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           ++     A                +DYF+  ++    +            D        L
Sbjct: 265 KQHPNAVAYTFWGENQRITNKGWRLDYFLASESIADKVH-----------DSYTLPDVSL 313

Query: 293 SDHCPISIDY 302
           SDH PI +  
Sbjct: 314 SDHSPIGLVL 323


>gi|237794947|ref|YP_002862499.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Ba4 str. 657]
 gi|229262666|gb|ACQ53699.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Ba4 str. 657]
          Length = 263

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 86/297 (28%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N +               ++       L +     + D++ LQE+        +
Sbjct: 1   MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49

Query: 84  FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           F       F             +  +++        +     +A+  K+    + ++ + 
Sbjct: 50  FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKDAFYIS 109

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +KD       R+ ++  +    K I V   HL            +         QA  L
Sbjct: 110 KSKDKNFWKA-RKIIKCKIFYKNKPILVYSCHLGW----------WDDKEEDFKFQANKL 158

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + + Q        ++ GDFN          D+    +  D       + +         
Sbjct: 159 IEDLRQ----DEICILMGDFNNDAFLNYRGYDYLINKNFKDIYHLAKSKDNGVTVIGDID 214

Query: 252 RNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K     + +D  + ++N      +  F+ I             +SDH  +    +
Sbjct: 215 GWKGNTKNMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262


>gi|159900071|ref|YP_001546318.1| endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159893110|gb|ABX06190.1| Endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 319

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/287 (11%), Positives = 65/287 (22%), Gaps = 58/287 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              S  Q +R+++WN+                   T D   L    +    DIV LQE  
Sbjct: 86  SANSTPQDLRIMTWNVFY----------------NTQDIAGLAATIRQQQPDIVVLQEYN 129

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                           + + +                 +A   +                
Sbjct: 130 FQLDPQLPEALEDLYPYAALDPHSGAG----------GLATLSRWPLRELAPV------- 172

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 +     L +        +++ H            T +          + + D  
Sbjct: 173 -ARGVDSCGCQYLEIATPNGPTRLINTHPHIPLASFKGIYTKTQQDPTFDHLLKLIAD-- 229

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                   P ++AGD N             +     D+  +          +N  +   +
Sbjct: 230 -----QSQPLILAGDLNTTERQPNYLRLRQQL---GDAYQQQGWGLGYTFPSNGAIPKAV 281

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +DY + + +                          LSDH  +  D 
Sbjct: 282 RLDYIMPNAHWQPLRAWNG--------------TANLSDHGFVVADL 314


>gi|94957776|gb|ABF47138.1| inositol phosphorylsphingolipid-phospholipase C [Cryptococcus
           neoformans var. grubii]
          Length = 529

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 86/307 (28%), Gaps = 57/307 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++S+N+  L+            K   +    + +Y  + + DIV LQE+  Y     
Sbjct: 13  TLKVLSFNVWGLA---------IVAKNRHTRIHAIAEYLASSNYDIVCLQELWIYKDYEV 63

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSF 137
           V  +    + +S                 + +A+  +   +   + P           + 
Sbjct: 64  VREEVQRNLPFSRFFHTGALG--------SGLAIFTRFPLIAAHALPYSLSGSPAQAFAG 115

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                + A  +++      ++ + + H+ +               +    Q+  L + + 
Sbjct: 116 DFFVKKAAANVVILHPVLGEVEIWNTHMHAAGEHPPDTRQ-----AHRIAQSWQLANAVR 170

Query: 197 QKKESLVPFVIAGDFNRKINYLGN--------------------NDDFWKTIDPNDSLIR 236
                     + GDFN +   +                      N +      P ++L  
Sbjct: 171 GGAAKGRYVFVMGDFNSQPWSIPIAMMRDHAQLMDSFDQVHPSANSEISPPPSPAEALKV 230

Query: 237 FPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +    DS  N     +             +DY    Q A        +      + +   
Sbjct: 231 YGMTCDSPLNTYSAGKPIPEHVLEKGGKRLDYIFFRQPAIARRRPLLWKYKDETDGEENH 290

Query: 288 RGKRLSD 294
            G   SD
Sbjct: 291 WGNNKSD 297


>gi|307705238|ref|ZP_07642105.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK597]
 gi|307621187|gb|EFO00257.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK597]
          Length = 271

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 78/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+       +V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEITSPEVEVNDLYKSLPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETAVDGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|318057512|ref|ZP_07976235.1| hypothetical protein SSA3_06214 [Streptomyces sp. SA3_actG]
          Length = 250

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 69/280 (24%), Gaps = 58/280 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++S+NI                     D   L +  +  D D+V +QE   +    K 
Sbjct: 22  VRVLSYNIR----------------SMRDDTAALGRVIRACDPDLVLIQEAPRFFRWRKA 65

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +          R                  +      V +    LL       R   R
Sbjct: 66  LARLA--------RSAGLVTLAGGATAAGPALLCSLRATVERTEDVLLPLTPGLHR---R 114

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V     ++ V+  HL             S +      QA+ L +   +      
Sbjct: 115 GFSTAVVRFGAARLGVVSCHL-------------SLAKDERLAQARLLTERAERLGAPH- 160

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++ GD N             +  D         +   +  N          ID   + 
Sbjct: 161 -VLVGGDLNEGPEGKAFRHVAGRLRDAWAVRPWGGEFTSTAENPY------QRIDAMFVS 213

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDY 302
           +             +      ++    R  SDH P+    
Sbjct: 214 E---------GVEVLGCGVPTLEDADVRAASDHVPVLAVL 244


>gi|282857399|ref|ZP_06266634.1| endonuclease/exonuclease/phosphatase family protein [Pyramidobacter
           piscolens W5455]
 gi|282584783|gb|EFB90116.1| endonuclease/exonuclease/phosphatase family protein [Pyramidobacter
           piscolens W5455]
          Length = 282

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 80/288 (27%), Gaps = 41/288 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++NI   +          S   T +D   L    +   AD++ LQE+     +   
Sbjct: 25  MTIGTFNIEFFTMSGSS--EDRSQPYTPADMRELADSIRRSGADVLALQEIEGNATMR-- 80

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-----AKDSFS 138
                     +      +   D+++            V ++              +    
Sbjct: 81  ------FFVATALPGWKYFGNDTDSTQDLFFLWNPTKVTLVGTPQLYYANRTGRFEGRSF 134

Query: 139 RAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLD--SLENTYSPSCSLLSQQAQWLKDW 194
           +  +R  +    + N  G    + ++HLKS   +     E     + +  + Q + L + 
Sbjct: 135 KLFDRPPLVARFKDNASGNIYTLANVHLKSMTTIGRRDAEAARRYNLAKRAAQTEKLNEL 194

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             + + +     I GD+N        +                        +        
Sbjct: 195 AARMEGA---LFILGDYNSPDPQKEVSFPLL-----------------GLRHGYSFDNWN 234

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +DY          L +   +E        + +     DH  I+++ 
Sbjct: 235 NNLDYIGYVGIGRDKLGEVKETETRIRHRSTRRKDHP--DHDIIAVEI 280


>gi|156392379|ref|XP_001636026.1| predicted protein [Nematostella vectensis]
 gi|156223125|gb|EDO43963.1| predicted protein [Nematostella vectensis]
          Length = 263

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 83/290 (28%), Gaps = 33/290 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           TAS+   +++ ++NI                 RT     +L +       DIV +QE+  
Sbjct: 3   TASLTNHLKIAAFNIRVFGTT---------KMRTPGVPDILVKILLRY--DIVLIQEIRD 51

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNN--DIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +  A            S+   +  S+R          A   R   V V+ +        
Sbjct: 52  SSQTAMPLLLQNLNSASSSPYKMAISERLGRTSSKEQYAYVYRSDLVSVVSKYVYSDPK- 110

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R    +    +   I    +        D+     +        + +W  D 
Sbjct: 111 ----DLFEREPFIVHFRSSTTAIKDFALVGIHTKPSDAANEISNLVDVYDDVRVRWAMD- 165

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                      +I GDFN   +Y+ ++D    ++  +        +              
Sbjct: 166 ---------DVIILGDFNAACDYMRDSDWRVNSLFTDQRFSWLITDCVDTTTGGGACAYD 216

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
               +          ++  S     ++++   +     ++SDH PI ++ 
Sbjct: 217 R---FVAAGAAMKSAVVPNSPGRFAFDKEYNLTEIVTDQVSDHYPIEMEL 263


>gi|15922225|ref|NP_377894.1| exodeoxyribonuclease [Sulfolobus tokodaii str. 7]
 gi|15623014|dbj|BAB67003.1| 241aa long hypothetical exodeoxyribonuclease [Sulfolobus tokodaii
           str. 7]
 gi|199436390|dbj|BAG70946.1| thermostable exonuclease III [Sulfolobus sp. Tu B-1]
          Length = 241

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 80/297 (26%), Gaps = 74/297 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VSWN+N L         ++                  L+ D + LQE+ S +     
Sbjct: 1   MKIVSWNVNGLKAITRKGALESV-----------------LNYDAILLQEIRSSD----- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +     ++        K  S     T    +     +  + +   G           
Sbjct: 39  LPLDLLMSGFNIASFPAKKKGYSGVMTLTREKPKSIIKGLNVKEFDEEGR---------- 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V +  +K ++++ +        S  +      + + +    L+           
Sbjct: 89  -----TVTVELEKFYLINAYFPRAGDGLSRLDFKISFDNKIEEFMDQLRR--------TK 135

Query: 204 PFVIAGDFNR--------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           P +I GDFN                       +     +                  + +
Sbjct: 136 PVIICGDFNAVVERRDSSFWDENEPGLSPKEREWMNHILKKGYIDAYRFINPTKIEYSWR 195

Query: 250 NLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + R K     IDY ++ +     +       +              SDH PI ++ +
Sbjct: 196 SYRFKWKAMRIDYCLVSEELKDKIRDCKILNVS------------GSDHYPILLEIE 240


>gi|330999011|ref|ZP_08322736.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT
           11859]
 gi|329575753|gb|EGG57279.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT
           11859]
          Length = 295

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 72/268 (26%), Gaps = 58/268 (21%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           +    DADIV +QE+            +      + +         +    ++  A+  +
Sbjct: 60  WLAKQDADIVCIQELK--------AQPDEVPDEINLDGTFYRYVHCAEKKGYSGCAILTR 111

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                     ++G  +       R      VE     + V+ I+  S    +  +     
Sbjct: 112 KKPDEV----IIGFGNEEFDREGRY-----VEARFNNLIVVSIYFPSGSSSEERQ----- 157

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------- 231
                 +    +K  + +        V+ GDFN     +   +      +          
Sbjct: 158 --QAKFRFLDVIKGRLDELLRDGRDVVLCGDFNIAHKEIDIKNWKGNLKNSGFLPEERQW 215

Query: 232 ------DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFS 276
                 +      +  D R +      N+           IDY                 
Sbjct: 216 ITDRLREGWQDVFRRLDPRPDRFTWWSNRGRARINNVGWRIDYQFSTPAIASTAK----- 270

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +    R +R SDH P+++ YDF
Sbjct: 271 ------ETDIYRDERFSDHAPLTVVYDF 292


>gi|269468349|gb|EEZ80020.1| exonuclease III [uncultured SUP05 cluster bacterium]
          Length = 255

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 87/303 (28%), Gaps = 75/303 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+++ N+N +   E    +                + K  +AD+V +QE+    A     
Sbjct: 3   RIITANVNGIRAAERKGFF---------------DWMKTQNADVVCVQEI---KAQEDQL 44

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +     T       K  S   ++              +   ++ +         R 
Sbjct: 45  DDKFYPKGIHTYYKPAERKGYSGTGLYCK-----------DKPDRVIFSPWEDIDFEGRF 93

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                ++ + + + V+ I++ S       ++                  ++ + +E    
Sbjct: 94  -----IQADFRNLSVISIYIPSGSSKQERQDYKMNFMIERFM------PYLKKLQEDGRQ 142

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +++ GD N                    L     + + +      I   +E +   +   
Sbjct: 143 YIVCGDINIVHKEIDIKNFASNKNHSGCLPEERAWMEQLFTEAKFIDAFREVNQEKHQYT 202

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              N+           IDY ++  N      +               + +R SDH P+ I
Sbjct: 203 WWSNRGQAWANNTGWRIDYQILSANLKDTPQRVEI-----------YKNERFSDHSPLII 251

Query: 301 DYD 303
           DY+
Sbjct: 252 DYN 254


>gi|199597635|ref|ZP_03211063.1| Metal-dependent hydrolase [Lactobacillus rhamnosus HN001]
 gi|258509776|ref|YP_003172527.1| metal-dependent hydrolase [Lactobacillus rhamnosus GG]
 gi|199591442|gb|EDY99520.1| Metal-dependent hydrolase [Lactobacillus rhamnosus HN001]
 gi|257149703|emb|CAR88676.1| Metal-dependent hydrolase [Lactobacillus rhamnosus GG]
 gi|259651040|dbj|BAI43202.1| putative hydrolase [Lactobacillus rhamnosus GG]
          Length = 355

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 85/324 (26%), Gaps = 65/324 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            Q    +++NI               G      S +        + +  +    DI F Q
Sbjct: 52  GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRAYSQQAVRKSINGVIKTTQAQKPDIAFYQ 111

Query: 73  EMGSYNAVAKVFPKNTW-----------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           E+      ++   +                       + +          + I    K  
Sbjct: 112 EIDPDGDRSRHVNEVEMVTNAQRQYANVYGQNYDSAYLFYPFNQPIGKAKSGILTLSKAK 171

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSP 179
               + Y L    D        RA         NGK+  +++IH+ +F            
Sbjct: 172 VDSARRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFIMVNIHMSAFTP---------- 221

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +  +   Q   L  +I    +     ++AGD+N ++          K +D   + +    
Sbjct: 222 NVKIQQAQFAKLFKYINHAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPKS 281

Query: 240 EKDSRCN--------------------ANKNLRNKIPID-YFVMDQNAYKFLIQESFSEI 278
           +  +                                 ID Y +   N    +  ES   +
Sbjct: 282 KLPAGFYIPTMGLAAAKVPSVRALDQPYKPGKSFVTLIDGYIL-SPN----IKAESVHVV 336

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
                     G + SDH P+ + +
Sbjct: 337 ST--------GFQYSDHNPVVLKF 352


>gi|24649587|ref|NP_732968.1| twin, isoform D [Drosophila melanogaster]
 gi|23172144|gb|AAN13987.1| twin, isoform D [Drosophila melanogaster]
          Length = 358

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 93/340 (27%), Gaps = 63/340 (18%)

Query: 27  VSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +N+  +  + ++      +           +    ++  ADI+ LQE+ +        
Sbjct: 1   MCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETEQFYHFFL 60

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL--------- 131
           P+     +       + +K  S  +       AI  R     ++++S             
Sbjct: 61  PELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMANAE 120

Query: 132 GAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           G+ +  +R   +      A+  + E   + +  +    +      +  +     C +   
Sbjct: 121 GSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDVKLI 180

Query: 187 QAQWLKDWITQKKESLVP--------------FVIAGDFNRKINYLGN------------ 220
           Q   L + +    +                   ++ GDFN   +                
Sbjct: 181 QTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVSMDH 240

Query: 221 -------NDDFWKTIDPNDSLIRFPKEKDSRCN-------ANKNLRNKIPIDYFVMDQNA 266
                       + +  ND+       K +           N     K  IDY    +  
Sbjct: 241 LDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYNEDIMPHTNYTFDFKGIIDYIFYTKTG 300

Query: 267 YK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 L   S   +  N+          SDH P+ ++ +
Sbjct: 301 MVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELE 340


>gi|68070969|ref|XP_677398.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56497502|emb|CAH97339.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 404

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 62/220 (28%), Gaps = 42/220 (19%)

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            I V  K+  + + +     +K     +  + A+ L   I    I V+  HL +      
Sbjct: 178 GIIVLSKHKILQKHALIFENSKFPEMFSA-KGAIYLKFNIKNNVIHVVATHLHAG----- 231

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESL-----VPFVIAGDFNRKINYLGNNDDFWKT 227
                        +Q + L  W+     S       P    GDFN +         F+K 
Sbjct: 232 ---NNKSDEKCRLKQIEELTKWVYHGIPSTFINKYEPLFFVGDFNIRYIKDEK---FFKE 285

Query: 228 IDPNDSLIRF-PKEKDSRCNANKN------------LRNKIPIDYFVMDQNAYKF-LIQE 273
           I  N  L              +               +    +DY ++ +++    ++ +
Sbjct: 286 ITSNKYLNCVVTNNTLETTYDSSINDYCRYVEDDFEHKYVDTLDYILVSKDSNVKTIVPQ 345

Query: 274 SFSEILYN-----------EDDIKSRGKRLSDHCPISIDY 302
           +  +  Y                       SDH PI   +
Sbjct: 346 TAVQRDYKPISIFKTMLCCIPYQSINIHHASDHFPIYATF 385



 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
          Q   ++S+N+  +       +     ++T   Y  + +     +ADI+ L E+ +  A
Sbjct: 9  QHFTIMSYNVQMIPVPISTKINIGYRQKTLEKY--ICELDDIYNADILVLNEVFTKQA 64


>gi|49473695|ref|YP_031737.1| hypothetical protein BQ00070 [Bartonella quintana str. Toulouse]
 gi|49239198|emb|CAF25514.1| hypothetical protein BQ00070 [Bartonella quintana str. Toulouse]
          Length = 295

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 74/281 (26%), Gaps = 51/281 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + S+N++     + +                +      L  DI+ LQE         
Sbjct: 54  DLTVASYNVHKCVGIDKIFNPT-----------RIVHVITELQVDILALQEADKRFGKRI 102

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    +       +       A+  +   +          + +      
Sbjct: 103 GLIDLQLLKAETGLIPVPLKTMSPHGHGWHGNALFLRKGHIRD------TLQITLPGIEP 156

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+ + +E+    I V+  H                     +QQ + L   +   K SL
Sbjct: 157 RGAIIVELEMEAGPIRVIAAHFGLLRHS-------------RNQQTKMLLSLVQ--KRSL 201

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GDFN         +         +    +         +  +    + +D  + 
Sbjct: 202 MPTLLIGDFN---------EWRIGKGSSLNHFSPYFDSTLGTVPSFPSRFPFLALDRILA 252

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +            +   E+      +  SDH PI    D
Sbjct: 253 FPH----------QLVTTIENHHSPLARIASDHLPIKAYLD 283


>gi|295661697|ref|XP_002791403.1| endonuclease/exonuclease/phosphatase family protein
           [Paracoccidioides brasiliensis Pb01]
 gi|226279960|gb|EEH35526.1| endonuclease/exonuclease/phosphatase family protein
           [Paracoccidioides brasiliensis Pb01]
          Length = 331

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 76/326 (23%), Gaps = 53/326 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        K    R       L  + ++     + LQE+        
Sbjct: 8   PIRILTHNIRY-ATSFPFKGEKPWPYRKQPLLNELHYHTRHNPESFICLQEVLHGQLTDI 66

Query: 83  VFPKN------------------------------------------TWCIFYSTERLIN 100
           +   N                                           W           
Sbjct: 67  LSGLNSSPTKHSTGTTATTGTGTGTGTATATGTGIGTGTGTCTGAAGEWAYIGVGREDGK 126

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
            +   S      +I   +    V     P + +K  +  A  R     + + +  +  VL
Sbjct: 127 QAGEYSPIFYRPSIWDLESFKTVWLSETPSVPSK-GWDAASTRLVTIGVFKHHASQKRVL 185

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
            ++       D        +  L+  Q           + ++    +AGDFN + N    
Sbjct: 186 AMNTHL---DDQGSTARYQAAKLILSQINAYLSQAQLARRNINGVFLAGDFNSEENQEAY 242

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRN----KIPIDYFVMDQNAYKFLIQESF 275
                      D+     +       N              IDY +         +  + 
Sbjct: 243 TVLTGAGSSLVDAQKEVEESLRYGSVNTYTGFGYEDEGPKRIDYVLFGPERGTASMPWTI 302

Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301
                   +    G   SDH  +  D
Sbjct: 303 E-GYAVLPNKFDDGVLNSDHRAVVAD 327


>gi|168182540|ref|ZP_02617204.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Bf]
 gi|182674371|gb|EDT86332.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Bf]
          Length = 263

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 87/297 (29%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N +               ++       L +     + D++ LQE+        +
Sbjct: 1   MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49

Query: 84  FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           F       F             +  +++        +     +A+  K+    + ++ + 
Sbjct: 50  FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKDAFYIS 109

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +KD       R+ ++  +    K I V   HL            +         QA  L
Sbjct: 110 KSKDKNFWKA-RKIIKCKIFYKNKPILVYSCHLGW----------WDDKEEDFKFQANKL 158

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----N 246
            + + Q        ++ GDFN          D+    +  D       + +        +
Sbjct: 159 IEDLRQ----DEICILMGDFNNDAFLNYRGYDYLINKNFKDIYHLAKSKDNGVTVIGDID 214

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K     + +D  + ++N      +  F+ I             +SDH  +    +
Sbjct: 215 GWKGNTKDMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262


>gi|296272687|ref|YP_003655318.1| exodeoxyribonuclease III [Arcobacter nitrofigilis DSM 7299]
 gi|296096861|gb|ADG92811.1| exodeoxyribonuclease III [Arcobacter nitrofigilis DSM 7299]
          Length = 261

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 79/307 (25%), Gaps = 73/307 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            K + VSWN+N +   +                    ++    D  ++ +QE  S     
Sbjct: 2   NKYKFVSWNVNGIRAVDKKEA---------------LKWVDEHDIHLLGVQETKS----- 41

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               K         +   N +  +S     +  A+        + + P +   D      
Sbjct: 42  ---MKTQIPETIFEKNFKNITASESAIKGRSGTALFTDIDITFECTCPTVDVLDEGR--- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                E+   +  K I   +++  +    +                 + L       K+ 
Sbjct: 96  ---INEVHFTLGDKDIAFFNVYFPNGQSKEERLVYKMEFYDRFLDHCESL-------KKQ 145

Query: 202 LVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD N     +                   +   K +  +  +           
Sbjct: 146 GKSIIVCGDVNTAHKEIDLARPKANEGTSGFLPMEREWIDKFLS-HGYIDTLRHVIGDEP 204

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           IDYF + ++  + +                      SDHC
Sbjct: 205 DNYSWWSYRANARANNVGWRIDYFYVSEDLKEHISNA-----------YIMSDIMGSDHC 253

Query: 297 PISIDYD 303
           PI+++ +
Sbjct: 254 PIALEME 260


>gi|282852873|ref|ZP_06262214.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1]
 gi|282555981|gb|EFB61602.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1]
          Length = 254

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 71/303 (23%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                            +LDADI  +Q+        ++
Sbjct: 1   MKFMSWNVNGLRAALRHGF---------------VNTFTDLDADIFAIQDTRVEPNEVQI 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++  +   ++                     +   + +             
Sbjct: 46  -DLPGYYQYWNYAKRKGYAGTAVFTKEK---------PITVANGFGVPEVDGEGR----- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     + +D+ +          +               L  +         
Sbjct: 91  -----SITLEFSNFYFIDVQVPFSGEKLQRLDFRELWAQTFRNYVTKLMQY--------K 137

Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NK 249
           P +I GD +   +          +    +  I+  +                        
Sbjct: 138 PVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERKEFSELLNAGFIDTFRYFHPDEAKYT 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DYF++  N    +I                     SDHCPI +
Sbjct: 198 YWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQIL-----------NNIMGSDHCPIEL 246

Query: 301 DYD 303
           D D
Sbjct: 247 DLD 249


>gi|297199103|ref|ZP_06916500.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
 gi|197715179|gb|EDY59213.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
          Length = 238

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 68/280 (24%), Gaps = 52/280 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+++S+NI                     D   L +  +  + D+V +QE   +    K 
Sbjct: 7   VKVLSYNIR----------------SMRDDTDALARVIQACEPDLVLIQEAPRFFRWRKK 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +                   +        A+       ++++  +L           R
Sbjct: 51  LARLASTAGLV---------VLTGGGTAAGPAILCNLRVTVERTEDVLLPLIPGQHR--R 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V I   ++ VL  HL             S        QA  L D +        
Sbjct: 100 GFATAVVRIGAARLGVLSCHL-------------SLQKDERYDQAGMLLDRLAGMGVEHA 146

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V  GD N +      +         +     +                   ID     
Sbjct: 147 --VAGGDLNDRPTGPAFSRI------ADSLQDCWATSPTGGEVTWTRTEPHRRIDAIFAT 198

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +                 E D+    +  +DH P+    D
Sbjct: 199 KGIEVRGCGVPLDLPGITETDL----RAATDHLPVLATLD 234


>gi|6735375|emb|CAB68196.1| putative protein [Arabidopsis thaliana]
          Length = 605

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 91/350 (26%), Gaps = 67/350 (19%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            A    ++S+NI  +T +  +  S               L +      AD+V LQE+ S 
Sbjct: 247 SAGSFTVLSYNILSDTSASSDLYSYCPPWALSWPYRRQNLLREIVGYRADVVCLQEVQSD 306

Query: 78  NAVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +      P+   + +   Y  +     S   S  D       R +   V +       A 
Sbjct: 307 HFHEIFAPELDKHGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSHVKKYDVEFNKAA 366

Query: 135 DSFSR-----AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------------- 176
            S +      A  R A+  LV+ N   I VL+    +     S +               
Sbjct: 367 QSLTDALIPQAQKRTALNRLVKDNIALIVVLEAKFGNQPTDPSGKRQLICVVLANTHVNV 426

Query: 177 YSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                 +   Q   L   + +    + +P ++ GDFN       +       +DP    +
Sbjct: 427 QQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTLPGSAPHTLLVMGKVDPMHPDL 486

Query: 236 RFPK------------------------------------------EKDSRCNANKNLRN 253
                                                           +     N     
Sbjct: 487 AVDPLNILRPHTKLTHQLPLVSAYSSFVRKGIMGLGLEQHRRRIDLNTNEPLFTNCTRDF 546

Query: 254 KIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               DY     +      + E   E    +D      +  S+H  +  ++
Sbjct: 547 IGTHDYIFYTADTLMVESLLELLDEDGLRKDTALPSPEWSSNHIALLAEF 596


>gi|225848729|ref|YP_002728893.1| exodeoxyribonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643820|gb|ACN98870.1| exodeoxyribonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 264

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 82/304 (26%), Gaps = 67/304 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++N+N            +   R       L+   +N D D++  QE+       K 
Sbjct: 1   MKICTFNLN------------SIKARKDLVLQWLKH--RNYDIDVLCFQEI---KVEEKN 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP + +       +             +  +A   K               D+  R    
Sbjct: 44  FPFDEFRSVGFIYQ------EVLGQKAYNGVATLSKFPMDRVLDGLNHDYFDNQKR---- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SL 202
                ++      +++++ +          +  Y           +    ++ +  + + 
Sbjct: 94  -----VLITKINDVYIINTYAPHGDLRGGEKYYYKLD------WYKHFISFLKENFDVNN 142

Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLI----RFPKEKDS 243
              ++ GD N  +      D                  + +     +      +P +   
Sbjct: 143 QKVILLGDLNIALEDKDVYDPILLKDSIGTMPEERELLRNLLDLGFIDSFRFLYPDKIQF 202

Query: 244 RCNANK----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                          + IDY ++ +   K+L                 R  + SDH P+ 
Sbjct: 203 TWWDYIGGAIWKNEGMRIDYILISKPLVKYLKDVEVDLWPRR-----RRDPKPSDHAPVI 257

Query: 300 IDYD 303
             ++
Sbjct: 258 ATFE 261


>gi|254505117|ref|ZP_05117268.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
           DFL-11]
 gi|222441188|gb|EEE47867.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
           DFL-11]
          Length = 324

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 96/333 (28%), Gaps = 64/333 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           ++L ++N+ +        + ++ + R       LR     L+ADI+ LQE+ +       
Sbjct: 1   MKLATFNLESFGTD---RIDEDLLAR---RIDALRPKLLELEADILCLQEVNAQKIKGQS 54

Query: 79  -----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                 + ++     +  F+ +  L    K          + V  +   +  +S     A
Sbjct: 55  SRQFHDLKRLIEGTPYQDFFMSGSLRPSGK---GPGDRHNLVVLSRYPVLSGESLYHRHA 111

Query: 134 KDSFSRAGN--------------RRAVELLVEIN-GKKIWVLDIHLKSF------CFLDS 172
           +    R G               R   +L +++  G+ + V ++HL++          D+
Sbjct: 112 EPPLWRPGTADPGYDEPQATAFDRPVQQLQIDLGTGRPLHVFNVHLRAPIAAQIRGGKDA 171

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQ-----------KKESLVPFVIAGDFNRKIN----- 216
             N  S S          LK                 ++     ++ GDFN         
Sbjct: 172 EHNWASVSAWAEGYHLSVLKQTAQALELRLGAEALFDEDPEAQIILTGDFNATGETRALR 231

Query: 217 --YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                 +D     +               +     +      +D+ +  ++    +    
Sbjct: 232 LLRADPHDTGVPDLGYRQLYQLDAALPLEQRKTVLHKGRAQTLDHVLASRSMTDRV--AH 289

Query: 275 FSEILYNEDD----IKSRGKRLSDHCPISIDYD 303
                    D            S H  + +D+D
Sbjct: 290 IKVFNAALPDEILEGDDPDYAGSYHAAMCVDFD 322


>gi|332362226|gb|EGJ40026.1| RgfB protein [Streptococcus sanguinis SK1056]
          Length = 271

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 66/277 (23%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREV--LVSEANDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E     +                +  +   P V+ 
Sbjct: 136 ETEVEGQLLTIASCHLSWWDKGFQGEWAKLEA----------------ELLKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  I +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGIEV 267


>gi|239831464|ref|ZP_04679793.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG
           3301]
 gi|239823731|gb|EEQ95299.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG
           3301]
          Length = 341

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 82/315 (26%), Gaps = 70/315 (22%)

Query: 1   MIRKYVLALVFFLVPCTAS--VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT------- 51
           M R+  + L+F ++  + +   A+           LS   G    + +  R +       
Sbjct: 65  MRREAAMLLLFAVMALSTTIGAARDF---------LSGSTGAQADEQAGARYSLVQINLR 115

Query: 52  ---SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
               +   + Q       D++  +E     +      + ++    +     N        
Sbjct: 116 EDNPEPKRILQMIAREKPDVITYEEASDQWSKWLTILQGSYPYHLNCADDPNTW------ 169

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
                + +  K     +     +G                 +   G  + V  IH     
Sbjct: 170 ----GVGILSKRPFSEEAQTACVGDG---------LLAIAPINFGGTTVHVAAIHFSWPW 216

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                             Q   L+    + ++   P +IAGDFN            + + 
Sbjct: 217 P---------------RWQPHQLRYIEPELQKLNGPMIIAGDFNAAPWSNAVRRVEYASG 261

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
             + + I           +       +PID  ++        +                R
Sbjct: 262 TRHLTGIGGTWMTHLLPVSLS-PYIGLPIDQILVSPEIGGARVSS--------------R 306

Query: 289 GKRLSDHCPISIDYD 303
               SDH P+ +D+ 
Sbjct: 307 EDAGSDHLPVRLDFS 321


>gi|150377362|ref|YP_001313957.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
 gi|150031909|gb|ABR64024.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
          Length = 353

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/326 (10%), Positives = 87/326 (26%), Gaps = 52/326 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTT---SDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +++ + ++N+  L+E         +               +  + L  DI   QE+    
Sbjct: 4   KRLSIGTFNLYNLNEPGLSMYTDKTGWSQEEYDRKIEWTSRTIRLLHPDIFGFQELWHSA 63

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-----------S 127
           ++ +   ++     Y      N   +           +     + L++            
Sbjct: 64  SIERALTQSGIAGDYDLIVPENADGKRIVCAAIVRKGLMISEPQWLKRFPEKFTLKSSGD 123

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSC---- 181
            P   A      + +R  +   V    + + I V   H KS       +  +  +     
Sbjct: 124 DPQTPAITVSIPSFSRPVLHFSVRPREDHEPIHVYVCHFKSKGPTKVFQEDWFEADGALY 183

Query: 182 -------------SLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNN------ 221
                           + +A  L+  +  Q K +  P ++ GD N   +    N      
Sbjct: 184 KKHATSIGAAISTIRRTAEAAALRFILTEQMKGTRTPVIVLGDINDGQHSNTANILTEQP 243

Query: 222 DDFWKTIDPNDSLIRFP-------KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--- 271
                       +  +        +        + +      +D+ ++ +  Y       
Sbjct: 244 RYLVGDSLGGGDVSLYTAQTLQEYRSTRDVYYTHVHQDIMESLDHILVSEEFYDNSRRRV 303

Query: 272 --QESFSEILYNEDDIKSRGKRLSDH 295
              +  +    + +    +    SDH
Sbjct: 304 WMFDGMTVNNDHLNSDDHKEAGTSDH 329


>gi|325568346|ref|ZP_08144713.1| RgfB protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158115|gb|EGC70268.1| RgfB protein [Enterococcus casseliflavus ATCC 12755]
          Length = 276

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 91/307 (29%), Gaps = 66/307 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++ N +  L E                   ++ Q     D DI+ LQE+    A   
Sbjct: 1   MKVLTLNTHSWLEEN------------QLEKCKMIAQEIATGDYDIIALQEVNQTIAAQT 48

Query: 83  VFPKNTW----------------------CIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           + P   +                       +                +  H   A+  K 
Sbjct: 49  IVPDGLYCPTDTLVEIKEDNFALRLVEELQLLDCDYYWSWTYSHVGYDIYHEGNALLSKQ 108

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             + ++   L            R+ +  + E +G+ + V+  H   +             
Sbjct: 109 PIIAKE--YLASQATDVWDHTTRKNLSGVTEADGQIVQVVSCHFSWWQDG---------- 156

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
               + + Q  + ++ ++ ++    +I GDFN      G+      ++   DS +   + 
Sbjct: 157 --KFAYEWQQTEAFLAERADT---LLILGDFNNDAASSGHQLVLDSSLQLQDSFLTAAET 211

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     +  ++ R  + IDY    ++              Y      +R   +SDH
Sbjct: 212 TGEASVVKAIDGWQDNREALRIDYVFASKDLQA---------TEYEVVFDGTRTPIVSDH 262

Query: 296 CPISIDY 302
             I + +
Sbjct: 263 FGIKVVF 269


>gi|254700252|ref|ZP_05162080.1| Endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513]
 gi|261750746|ref|ZP_05994455.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513]
 gi|261740499|gb|EEY28425.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513]
          Length = 285

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 67/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 33  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIVLQEADRRFGE 81

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 82  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLREGVVRNVQQLKLPG------V 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 136 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSALQ--EA 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 181 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATAVPSFPSRFPVLALDR 230

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              + I   E       +  SDH PI    D
Sbjct: 231 VL----------GAPDNLITSVEVHNTPLARLASDHLPIKAHLD 264


>gi|268537020|ref|XP_002633646.1| C. briggsae CBR-CCR-4 protein [Caenorhabditis briggsae]
 gi|187036553|emb|CAP24230.1| CBR-CCR-4 protein [Caenorhabditis briggsae AF16]
          Length = 781

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 94/348 (27%), Gaps = 71/348 (20%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  +     S   +         +L+ +  +  +AD++ LQE+ +    
Sbjct: 406 TFTVLCYNVLCDKYATVNQYSYCPSWALNWEYRKSLIIKEIRTYEADVITLQEVETEQYR 465

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLG---- 132
               P+     +         +K     +       AI  +     + +Q          
Sbjct: 466 TLFLPELKTLGYTGIFAPKTRAKTMGEEERKYVDGCAIFWKVDKFDMDRQQVFEFSSVAM 525

Query: 133 -----AKDSFSRAGNR--RAVELLVEIN------------------GKKIWVLDIHLKSF 167
                +++  +R   R   A+  +++I                   G  + V   H+   
Sbjct: 526 KKASTSENMLNRVMPRDNIALCAVLKIKENVYANRRMTIPANDNVVGNPLVVCTAHIHW- 584

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINY------- 217
                  +       +L+ +   + + +++K    +  VP +I GD N   +        
Sbjct: 585 --DPEFCDVKLVQTMMLAHEVSRILEDVSKKYMITQQQVPVLICGDLNSLPDSGVFEYLS 642

Query: 218 ------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------NANKNLRNKIPI 257
                           D   +    +                        N  L  +  I
Sbjct: 643 KGQITRRHLDLKSFREDSCLEKFTNSSDKNVISHPLRLDSACDLQSIPFTNYTLDFRGMI 702

Query: 258 DYFVMDQNAYKFL-IQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302
           DY      +   L I   F       + I         SDH PI   Y
Sbjct: 703 DYIFATPQSLARLGILGPFDPQWVATNKILGFPHPHVPSDHIPIMAQY 750


>gi|84685512|ref|ZP_01013410.1| hypothetical protein 1099457000258_RB2654_11603 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666669|gb|EAQ13141.1| hypothetical protein RB2654_11603 [Rhodobacterales bacterium
           HTCC2654]
          Length = 266

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 77/306 (25%), Gaps = 67/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82
           +R++S N                     + +  L  Y ++   D++ LQE+    A  + 
Sbjct: 1   MRIMSLN-----------------SWGGTLWDSLLPYLRDESPDVLCLQEVVHSPASPRD 43

Query: 83  -----------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                                    P +      +    +        +    A  V + 
Sbjct: 44  WLIYRDGDHVLDQRANLLRDVTGALPDHVPLFCPAARGTLWDGDDPVPSFWGLATFVHRD 103

Query: 120 NVRVLQQS---YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
              V Q     +    A        +R    + V  + +    + I         + +  
Sbjct: 104 LPIVGQVQGFVHKGFEANGFGEHPRSRSGHAVRV-WDDRLDRGVSIAQMHGLRDLAGKMD 162

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                   + QA+     +    E     V+ GDFN +        +    +        
Sbjct: 163 TPE----RAVQARRFLGLLRAVAEPGDATVLCGDFNVEPGS-----ETLSYLADEGFDEL 213

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                      +   +     DY ++  +        +F  +         R   +SDHC
Sbjct: 214 VTGGGHPTTRTSHYPKPGRFADYMLVGPDTR----PAAFEVV---------RDPEVSDHC 260

Query: 297 PISIDY 302
           P+ +  
Sbjct: 261 PLVLTL 266


>gi|83858654|ref|ZP_00952176.1| hypothetical protein OA2633_04106 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853477|gb|EAP91329.1| hypothetical protein OA2633_04106 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 324

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 76/289 (26%), Gaps = 76/289 (26%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +P  +   + +RL+S+N+  L+                 D      + +  D D+VFLQ
Sbjct: 102 ALPPRSETGEALRLISFNMWNLN----------------RDPDAAIAFLREGDFDVVFLQ 145

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+       +  P +    +   +R                 AV  +   + +   P   
Sbjct: 146 EV---GGALRGVPASLQETYPYQQRC------------RWGAAVISRLPLLERGCDPY-- 188

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                          + +E  G  + +   H       D  +              + L 
Sbjct: 189 --------ETVPVAFIEIEFQGAPLRLTSTHFARPTRPDLYQYHR-----------EQLG 229

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--KN 250
           + IT         ++AGDFN         + F   +  +            R   +    
Sbjct: 230 ELITDHAHQSQ--ILAGDFNTA------ENGFQMRLLADALAPLERITHGLRTWPSERVL 281

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               I ID+  + +                            SDH P+ 
Sbjct: 282 PLPVIGIDHIWVSEGLCASYTGA--------------AADAGSDHRPVF 316


>gi|331699058|ref|YP_004335297.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190]
 gi|326953747|gb|AEA27444.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190]
          Length = 268

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 66/272 (24%), Gaps = 51/272 (18%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  +    DAD+V LQE      +   ++        +  T    +             +
Sbjct: 20  LTAWLAATDADVVCLQETRARHEDLPDELLGVLERAGWLLTLAPSD------AAQGRAGV 73

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            V  +      +         +  R        + V++ G  + V  ++L +        
Sbjct: 74  GVLTRVAPEAVRVGIDAAEGAAAGR-------YVEVDLPG--LTVASLYLPNGTVGT--- 121

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-------- 226
                    L+  A +L +   +        V+ GD+N         +            
Sbjct: 122 PRQDEKDRFLAAFAPYLAERREKAAAEDREVVVCGDWNIAHTEADIRNWRGNVRNSGFLP 181

Query: 227 -------TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270
                   +  +  +                   +           ID  V         
Sbjct: 182 HERAWLGELYGSGWVDVVRSLHPGVDGPYSWWSYRGRAFDNDTGWRIDLHVATAGLAARA 241

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       +   S  +R SDH P+++ Y
Sbjct: 242 SSA-------VVERAPSHAERWSDHAPVTVRY 266


>gi|167555152|ref|NP_001107928.1| hypothetical protein LOC797209 [Danio rerio]
 gi|160773435|gb|AAI55114.1| LOC797209 protein [Danio rerio]
          Length = 558

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/338 (10%), Positives = 82/338 (24%), Gaps = 84/338 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           +++V+WNIN +   +                  +++   + DADI+ +QE      +   
Sbjct: 1   MKIVTWNINGIRTFKNG----------------IKKILDSFDADIICVQETKVTRDLLDE 44

Query: 82  KVFPKNTWCIFYS-----------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YP 129
           K    + +  ++S                + +      +  T +   +  V         
Sbjct: 45  KTAIVDGYNSYFSFSRGRSGYSGVATYCKDTATPFLAEEGLTGLLSNQGEVIGCYGDQVE 104

Query: 130 LLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLK-SFCFLDSLENTYSPSCSLLS 185
           L   +        R  +     + +   +K+ V++++   +       +        LL 
Sbjct: 105 LTSEEFLALDNEGRAVISQHHFIGQDGPQKLTVINVYCPRADPDKPERKEFKLQFYRLLQ 164

Query: 186 QQAQWL------------------------------------KDWITQKKESLVPFVIAG 209
            +A+ +                                    + W+ Q           G
Sbjct: 165 CRAEAILSSGSHVIILGDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDQFLFETAENSENG 224

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQN 265
           +   +                +       +     C +             IDY   + +
Sbjct: 225 NAADEPAEDFQESASGGKFVDSFRYFHPKRSNALTCWSTLTGARQTNYGTRIDYIFSNHS 284

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                         +            SDHCP+     
Sbjct: 285 L----------VKTFFIGVDIMPEVEGSDHCPVWAQLS 312


>gi|325690925|gb|EGD32925.1| RgfB protein [Streptococcus sanguinis SK115]
          Length = 271

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 67/277 (24%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLAPREV--LVSEANDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E     +                +  ++  P V+ 
Sbjct: 136 ETEVEGQLLTIASCHLSWWDKGFQGEWAKLEA----------------ELLKAETPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHTAAKEAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|294507988|ref|YP_003572046.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8]
 gi|294344316|emb|CBH25094.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8]
          Length = 528

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/317 (10%), Positives = 74/317 (23%), Gaps = 53/317 (16%)

Query: 18  ASVAQKVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           A  A  +R++S+N +N    ++    ++              +     +  ++  QE+  
Sbjct: 232 APTASALRMLSYNSVNDFDREQSAIFFETRQPSFR-------RIFDATNPGVIAFQEVYD 284

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A       +                          + +  +   +   + P      S
Sbjct: 285 QTADQVAAVADEALGLPDEWDWA---------KQGQDLVLGSRYPILDTHTIPGYENNVS 335

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            +       ++    +    + V           D  E + +     +          + 
Sbjct: 336 GA-----FLLDADDALGTDLLVVNMHPPCCNYGPDDGEPSRNAQRQQVVDGVVAFLREVK 390

Query: 197 Q-----KKESLVPFVIAGDFNRKINYLGNN-------------------DDFWKTIDPND 232
           Q           P V+ GD N   +                        D     +    
Sbjct: 391 QGDGPFDVPPKTPIVVLGDMNFVGDAQQPRTLRTGEIVYTDRYGPPAAPDWDGSPLLDTR 450

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                     +      +      +DY  +  +  + + +          D   + G R 
Sbjct: 451 PRQVASPLHTTWIAPGSSF-PPGRLDYAFVTDSVLEVVHEFVLHTPALPADVRSAHGLRA 509

Query: 293 ------SDHCPISIDYD 303
                 SDH P+ ID  
Sbjct: 510 DDTPTASDHLPVVIDVT 526


>gi|94309094|ref|YP_582304.1| exodeoxyribonuclease III (xth) [Cupriavidus metallidurans CH34]
 gi|93352946|gb|ABF07035.1| Exodeoxyribonuclease III [Cupriavidus metallidurans CH34]
          Length = 258

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 91/307 (29%), Gaps = 78/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VA 81
           +R++S N+N +        +               ++    +AD+V +QE+ +  A    
Sbjct: 2   LRIISANLNGIRSASKKGFF---------------EWMGKQEADMVCVQELKAQEADMTE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + +  ++       +S           +  R K  RV+      +G  ++   A 
Sbjct: 47  AFLAPHGYHGYFHYAEKKGYSG--------VGLYTRHKPERVI------IGFGNTEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE+    + V+ +++ S    +  +                LK        S
Sbjct: 93  GRY-----VEVQYPHLAVISVYVPSGSSSEERQQAKFRFMEAFLPHLLELKA-------S 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKT---------------IDPNDSLIRFPKEKDSRCN 246
               V+ GD N     +   +                    +  N   +   ++ D R  
Sbjct: 141 GREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWIGELFDNHGYVDVFRQLDPRPE 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +            S             + ++ SDH P
Sbjct: 201 QYTWWSNRGQAYAKNVGWRIDYHLTTAKIAATAKATSI-----------YKDEKFSDHAP 249

Query: 298 ISIDYDF 304
           +SIDYDF
Sbjct: 250 LSIDYDF 256


>gi|296124108|ref|YP_003631886.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
 gi|296016448|gb|ADG69687.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
          Length = 387

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/292 (9%), Positives = 77/292 (26%), Gaps = 49/292 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P    +  ++R+ S N+                      +  + +  + L  D+V  QE 
Sbjct: 137 PAPEPMTGRLRIASCNVQ----------------DYQPAFGDVLRDLEELPPDVVAFQES 180

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S N + +         +++    +        +     +     +    + S  ++   
Sbjct: 181 RSINPLCED--------YFADWHKVQVEYFFVASKWPLEVLGHCDDSPFERSSGLVVKVA 232

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                        +      +++                    +    + S++ Q L+ +
Sbjct: 233 HPEHPFALANIHLMTARPGLRELT------PGSILRGDGPAELAALTLMRSEEMQQLRHF 286

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252
           I +   + +P ++ GDFN          + W  +              + C         
Sbjct: 287 I-ENARNGLPLIVVGDFN-TPASSHVFQEAWGDLTGGFETAAIGPSHTAPCRPISFWPGT 344

Query: 253 -NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+  +                 +      +  +  SDH  ++ + +
Sbjct: 345 WPWSRIDHIRVTPE--------------WKFHQFVTGDRNGSDHRLVACELE 382


>gi|119386766|ref|YP_917821.1| endonuclease/exonuclease/phosphatase [Paracoccus denitrificans
           PD1222]
 gi|119377361|gb|ABL72125.1| Endonuclease/exonuclease/phosphatase [Paracoccus denitrificans
           PD1222]
          Length = 260

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 77/285 (27%), Gaps = 57/285 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                 +RL S+N++      G    + ++           +    L AD++ LQE+   
Sbjct: 2   PKSPDHLRLASYNLHKCRGMTGPHAPERNL-----------RVIAELGADVIALQEVDFR 50

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                           +            N+       +  +     +     L      
Sbjct: 51  FGARPEALPRALIEKTTGMVPAPFLGTGENSLGWHGQTILLRPELRGKAEIRRLPLPGI- 109

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R A+ L +      I V+ +HL        + ++     S +  QA+ +      
Sbjct: 110 ---EPRGALVLRLP----GITVVAVHLGL------MRSSRRAQLSRIIAQARRI------ 150

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                    + GDFN   +         + ++  ++L            +      ++  
Sbjct: 151 ---GHDRMALTGDFNEWHDS--------RGLEALEALRVVTPGP-----SWPAPFPRLRY 194

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D F +           S   +     D     +  SDH P+  D 
Sbjct: 195 DRFAVS---------RSIEVLDCGVLDN-EMARAASDHLPVWADL 229


>gi|260584082|ref|ZP_05851830.1| RgfB protein [Granulicatella elegans ATCC 700633]
 gi|260158708|gb|EEW93776.1| RgfB protein [Granulicatella elegans ATCC 700633]
          Length = 271

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 79/281 (28%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + LL Q   + + D++  QE+     + +V   + +    S                
Sbjct: 17  EEKFNLLLQDILDKNYDLICFQEVNQEITLPEVKVDDYYKALPSAEPIHQDHYVRLLLEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LAESGRNYYWTWSYNHIGYDRYHEGVAILSKTPIEAREV--LVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +         +    +      + L            P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKG------FQEEWARFETVLKTLNK----------PLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAKEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     +   ++SDH  ++   ++
Sbjct: 239 KEL---------EIENLHVVFDGNHSPQVSDHFGLNAQLNW 270


>gi|332299845|ref|YP_004441766.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica
           DSM 20707]
 gi|332176908|gb|AEE12598.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 390

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 94/299 (31%), Gaps = 64/299 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS N N     E  +  ++              Y    DADI+ LQE    +  +K 
Sbjct: 129 IKVVSLNANAFQFAELGAHDQHPA----------TDYLAESDADIICLQEAWLSDNDSKY 178

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             + +  + ++ +    +S   +  D  + + V  K   +  +   L    +        
Sbjct: 179 MSERS--LHHTMQAYPYYSSAYAVKDHGSRLIVLSKYPILSTRPIDLHSKFN-------- 228

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------------------NTYSPSCSL 183
                 + +  KK+ + ++HL+SF F    +                      +SP    
Sbjct: 229 GGAVFTILVGEKKLVLYNLHLESFGFTKEEQKLYFQLAQEGNPKGFTQAVGGRFSPPFVR 288

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            ++Q + +   +  ++      +I GDFN       ++         +  L         
Sbjct: 289 RAKQVEQIYQDVNYQESP--YVLICGDFNDTPISYTHHRL-------STGLHDAIATTGR 339

Query: 244 RCNANKNLRN--KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             N +   ++   + ID+ +   +                      R   +SDH PI  
Sbjct: 340 GTNYSYYFKSLIGVRIDHMLYSDHIEARAA-------------YVDRTAEISDHKPIIC 385


>gi|145589572|ref|YP_001156169.1| endonuclease/exonuclease/phosphatase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047978|gb|ABP34605.1| Endonuclease/exonuclease/phosphatase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 250

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 87/289 (30%), Gaps = 52/289 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78
             +  ++S N++             S     S    LRQ  +    D++FLQE+      
Sbjct: 6   GSRFTVMSMNVH----------KGLSPLHRHSTIYQLRQRMRTHYPDLLFLQELQQEHRG 55

Query: 79  AVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            + +       + T  +     R  ++ K     D H   A+  ++      +Y +    
Sbjct: 56  RLQRFGQWPLTELTHFLSEDFWRDWHYGKNSEYPDGHHGNAILSRHPLSKGNNYDISA-- 113

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R   R  +  + +++G    +    +    F                +Q   +  +
Sbjct: 114 ---YRFEKRGLLHSVTQLDGVSQSIHCFCVHLALF-----------ERGRERQLTEIIRY 159

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I +      P ++AGDFN         +     +        F     +      ++R  
Sbjct: 160 IEE-LTGDAPTIVAGDFNDW------RNRISAPMREAGFNEVFEVLTGAPARTFPSIRPM 212

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +D   +                  +  +I     +LSDH  I+ + +
Sbjct: 213 LAMDRIYVRG-------------FKVHSVEILHEWLKLSDHLGITAELE 248


>gi|319898199|ref|YP_004158292.1| hypothetical protein BARCL_0008 [Bartonella clarridgeiae 73]
 gi|319402163|emb|CBI75689.1| conserved protein of unknown function;
           [Endonuclease/exonuclease/phosphatase domain]
           [Bartonella clarridgeiae 73]
          Length = 293

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/281 (11%), Positives = 74/281 (26%), Gaps = 51/281 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + S+NI+     + +                + +    L  DI+ LQE         
Sbjct: 48  DLTIASYNIHKCVGVDRIFNPT-----------RIVRVIAELQTDILALQEADKRFGERT 96

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    +  +    N       A+  +  R+   S   L           
Sbjct: 97  GLVDLQLLKAETGLIPVPLNTMSPNGHGWHGNALFLRQGRIHNISQITLPG------FEP 150

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+ + +++    I V+  H                     +QQ + L   + +   S+
Sbjct: 151 RGAIIVELKMKSGFIRVIAAHFGLLRHS-------------RNQQVKMLLALLKKY--SV 195

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GD N         +         +    +         +  +    + +D    
Sbjct: 196 MPTLLIGDLN---------EWRNGKGSSLNFFSSYFDVTLGNVPSFPSRFPFLALDRIFA 246

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +     ++                 +  SDH PI    +
Sbjct: 247 FPHQLVTNVES----------HYSPLARIASDHLPIKAYLN 277


>gi|77406522|ref|ZP_00783574.1| exodeoxyribonuclease III [Streptococcus agalactiae H36B]
 gi|77411367|ref|ZP_00787714.1| exodeoxyribonuclease III [Streptococcus agalactiae CJB111]
 gi|77162540|gb|EAO73504.1| exodeoxyribonuclease III [Streptococcus agalactiae CJB111]
 gi|77174861|gb|EAO77678.1| exodeoxyribonuclease III [Streptococcus agalactiae H36B]
          Length = 275

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSESTRALMSR------QVIDTLVAEDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++    L+  S  +     +       +       S+P + A  +    G  
Sbjct: 55  KHLEVLETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  ++  ++  +                  ++    L        +S  
Sbjct: 114 -----IITLELENCYITQVYTPNAGDGLKRLADRQIWDIKYAEYLATL--------DSQK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N                           +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 SWWAQRSRTSKINNTGWRIDYWLTSNRVADKITKSEMIHSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 ILEIE 274


>gi|332019311|gb|EGI59818.1| 2',5'-phosphodiesterase 12 [Acromyrmex echinatior]
          Length = 564

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 78/318 (24%), Gaps = 38/318 (11%)

Query: 23  KVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             R++S+NI          S+                   L+ +     ++DI+ LQE+ 
Sbjct: 243 SFRVISYNILADTYADSDFSKDVLFPYCPQYALDMDYRKQLILKEIIGFNSDIICLQEVD 302

Query: 76  SYNAVAKVFP---KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--- 129
                  + P      +   + T+  +N       N         ++++       P   
Sbjct: 303 KNIFEYDLLPSLYMLNYNGVFVTKNEVNEGLATFFNQDRFEQLGFERSIIAQNVDLPKFA 362

Query: 130 -LLGAKDSFSRAGNRRAVELLVEI------NGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
            +    D+        +    +++        +   ++  +   +   D+          
Sbjct: 363 AIWSKIDNDKMKERFLSRNTTIQVTTLRSKENRSEILVVGNTHLYFKPDADHIRLLQGYY 422

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------YLGNNDDFWKTIDP 230
            ++      K    +  E  V  +  GDFN                     D    T + 
Sbjct: 423 AITYLHDVAKRIQKENPECNVSVIFCGDFNSVPECGIYQLITKNYVSETCEDWKSNTEET 482

Query: 231 NDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDD 284
             ++        S         N        +DY            +    S+       
Sbjct: 483 VKNISLRQDLCMSSACGVPEYTNYTPEFSACLDYIFYERDKFEVEQVVPMPSKEELTLHT 542

Query: 285 IKSRGKRLSDHCPISIDY 302
                   SDH  +  D 
Sbjct: 543 GLPSVVFPSDHISLCADL 560


>gi|255536502|ref|YP_003096873.1| hypothetical protein FIC_02378 [Flavobacteriaceae bacterium
           3519-10]
 gi|255342698|gb|ACU08811.1| hypothetical protein FIC_02378 [Flavobacteriaceae bacterium
           3519-10]
          Length = 426

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 81/304 (26%), Gaps = 44/304 (14%)

Query: 34  LSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNL-------DADIVFLQEMGSYNAVAKVFP 85
           L++   V+  KN    + T   T + +    L       +  IV L E+ +   V  +  
Sbjct: 122 LADDFTVNSSKNWNTDKYTQKLTNIARVISELGRQYTNDNPAIVGLLEVENRQVVEDIIK 181

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           +    +   +   I H        I  A+   + +          +        R+  R 
Sbjct: 182 QP---VLAKSNYGIVHYNSYDARGIDIALLYQKSRLKVTETYDKEVKIFNAEGKRSYTRG 238

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            + +   ++G+ + +   H  S    ++       + + + +Q    +    + +   V 
Sbjct: 239 VLVVKGFLDGEPVGIFLNHWPSRSGGEAATVARRAAAATVLKQ----EMDKARAENPDVK 294

Query: 205 FVIAGDFNRKINYLGNNDDFW------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
               GDFN                   +  +         K   +   +          D
Sbjct: 295 LFAMGDFNDDPVSSSLRKHLGAVGEPSQLSEKAPYYNLMTKLYKAGVASLAYRDAPNLFD 354

Query: 259 YFVMDQNAYKF---------------------LIQESFSEILYNEDDIKSRGKRLSDHCP 297
             ++ +N Y                            +        D        SDH P
Sbjct: 355 QIIVSKNLYSPEKLTKTYSVYKVEIYAPSYLVNTAGQWKGYPLRSWDGDRFTGGFSDHFP 414

Query: 298 -ISI 300
            +S+
Sbjct: 415 AVSV 418


>gi|254522062|ref|ZP_05134117.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14]
 gi|219719653|gb|EED38178.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14]
          Length = 268

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 81/317 (25%), Gaps = 87/317 (27%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
             R++S+N N +                 +       + +  DAD++ +QE         
Sbjct: 2   TFRIISFNANGIRS---------------AATKGFLDWFRAQDADVLCIQETKAQEDQLT 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +F  +    FY         +       ++ +A+  K       +       D   R 
Sbjct: 47  DPMFRPDGHHCFY---------RDAITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRY 97

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                    +E     + V+  ++ S    D  +              +WL+  + +   
Sbjct: 98  ---------IEARYGNLSVVSFYIPSGSSGDLRQGFKFEV-------MEWLRPILEEWAR 141

Query: 201 SLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKD-- 242
           S   +V+ GD+N   +                     D        +         +   
Sbjct: 142 SGRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPEERDWLNALCADHGQATDVAAGRGWA 201

Query: 243 -------SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                            N+           IDY  +       L   S            
Sbjct: 202 DAYRLLNPTGEDYTWWSNRGAARANNVGWRIDYQFITPGLRDRLRSCSI----------- 250

Query: 287 SRGKRLSDHCPISIDYD 303
            R +R SDH P  +DYD
Sbjct: 251 YRDERFSDHAPFIVDYD 267


>gi|322376933|ref|ZP_08051426.1| RgfB protein [Streptococcus sp. M334]
 gi|321282740|gb|EFX59747.1| RgfB protein [Streptococcus sp. M334]
          Length = 271

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 80/281 (28%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + LL +   + D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQLLLEDVLDKDYDLICFQEINQEITSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRIALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAV------LKELNK----------PLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYIFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VEKLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|62085820|gb|AAX63301.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 71/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSF-----------SRAGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                   + +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTPSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085836|gb|AAX63309.1| DNA lyase [Cordyceps brongniartii]
          Length = 579

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 71/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSF-----------SRAGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                   + +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTPSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|71897607|ref|ZP_00679852.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1]
 gi|182681249|ref|YP_001829409.1| endonuclease/exonuclease/phosphatase [Xylella fastidiosa M23]
 gi|71732510|gb|EAO34563.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1]
 gi|182631359|gb|ACB92135.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa M23]
          Length = 256

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 84/290 (28%), Gaps = 61/290 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R+++ NI   S     S +            R   +   + Q A     DIV LQE   
Sbjct: 9   LRVLTANIQAASSTRRYSDYVTRSWSHALPIGRKRINLDAIAQLAGER--DIVGLQESDP 66

Query: 77  YNAVAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            +  +    +  +      +       + +          +  R K  ++   + P    
Sbjct: 67  GSLRSGFTNQTCYLAQRAGFHYWSHQPNRRMAGVASSANGLLSRLKPRQIHNHALP---- 122

Query: 134 KDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                R   R  +       G   + V  +HL                      Q  ++ 
Sbjct: 123 ----GRIPGRGVLLAKFGNGGFDSLVVAVVHLSLG-------------VRSRMAQLVFIA 165

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           D + +   +    ++ GDFN + +       + +T      ++              + R
Sbjct: 166 DLLAEYPNT----ILMGDFNCRADCSEMQVLYRRTRLQPPGVVIPT---------FPSWR 212

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +  ID+ ++ +              +   + + +     SDH  +S+D 
Sbjct: 213 PERAIDHILVSEGF-----------YICKTEAVPAA---FSDHLAVSMDL 248


>gi|260466692|ref|ZP_05812879.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
 gi|259029555|gb|EEW30844.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
          Length = 344

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 93/331 (28%), Gaps = 86/331 (25%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +++V+WN+  L   +                  +         D+V L E+ +  A
Sbjct: 51  SGDALKVVAWNVERLRHVD-----------------AIAATLAGQAPDVVLLSEVDNGMA 93

Query: 80  -----------VAKVFPKNTWCIFYSTERLINHSKR-----------DSNNDIHTAIAVR 117
                        ++     + + +      N  +R              N + +A  + 
Sbjct: 94  RSGNGHPLGVLAERLGHAFAFGVEFVELGGGNEGERAATGEVANAEGFHGNAVTSAFPLL 153

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +  +  L  +      +    R G R A+   V I  +K+ V+ +HL++           
Sbjct: 154 RPFLVRLDAAGGWFRPEHDQPRIGGRMAIGGQVRIGNRKVTVVSVHLEN----------- 202

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------- 220
               +  + Q + L D I +  +   P ++ GDFN                         
Sbjct: 203 RTDPAGRAIQTRHLLDAIDKY-DPEAPVLLGGDFNTLTASHEERHDDPRAWMARLAAEPG 261

Query: 221 -------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                  ++  +  +       +     D      +       ID+F         L   
Sbjct: 262 RLIHVERHEPLFAVLAGRGYDWQAANNLDLPTQRREAGTPVGRIDWFFTRG-----LEAS 316

Query: 274 SFSEILYNEDDIKSRGKRLSDH--CPISIDY 302
           + + +      +   G   SDH    +++  
Sbjct: 317 APAVLPA----VLPGGGPSSDHEALAVTVRL 343


>gi|111225231|ref|YP_716025.1| hypothetical protein FRAAL5881 [Frankia alni ACN14a]
 gi|111152763|emb|CAJ64506.1| hypothetical protein; putative membrane protein [Frankia alni
           ACN14a]
          Length = 356

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 81/286 (28%), Gaps = 60/286 (20%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
               + ++R++S N+   +                     L    ++ + D++ L E   
Sbjct: 128 APQGSARLRIMSANLLYRNAH----------------ADRLGAQIRSANPDVLILVE--- 168

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 + P     +  S        +    +D     A+  +       + P++G   S
Sbjct: 169 ------LSPLTLSRVNASGALAGFPYREVHPDDGAFGAAIYSRFPLRDA-ATPVVGGSMS 221

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                    +   VE++  + +V+           S    +    + L  +AQ       
Sbjct: 222 ---------LRATVEVDENRRFVMYAVHTISPTSGSYTGRWRTQLTALRHEAQ------- 265

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
               + +P V+AGDFN   ++          +     ++    E      +       + 
Sbjct: 266 ---HATLPVVMAGDFNATRDHRPLRRLVSAGVRDAHDVVGGGWEPTWNARSVVLP-PVLR 321

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID+ +                  +     +      SDH P+  D 
Sbjct: 322 IDHVLTSPA--------------FAVTGFQVGHDFGSDHLPVIADL 353


>gi|227544091|ref|ZP_03974140.1| exodeoxyribonuclease III [Lactobacillus reuteri CF48-3A]
 gi|300909790|ref|ZP_07127251.1| exodeoxyribonuclease III [Lactobacillus reuteri SD2112]
 gi|227185924|gb|EEI65995.1| exodeoxyribonuclease III [Lactobacillus reuteri CF48-3A]
 gi|300893655|gb|EFK87014.1| exodeoxyribonuclease III [Lactobacillus reuteri SD2112]
          Length = 275

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/305 (9%), Positives = 74/305 (24%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++++     +  +    R       + +    +  D++ +QE          
Sbjct: 1   MKFISWNIDSINAALTGTSVRAGETR------EVLKKIAAMKPDVIAIQETKLSKNGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +    +   S  +     +             + +YP + A +     G  
Sbjct: 55  KHLTVLQELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKVTYPKINAPEPMDDEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +V +++  +        +               L            
Sbjct: 114 ---IITLEFPD--FYVTEVYTPNSGNGLKRLDERQTWDDCYRDYLHELDQ--------QK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F           
Sbjct: 161 PVIASGDFNVAHEEIDLAHPATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +                DH PI
Sbjct: 221 SWWAQRVITSKQNNSGWRIDYWLVSDRLADKITEAGMIDSGERR-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 ILEID 274


>gi|94501571|ref|ZP_01308088.1| hypothetical protein RED65_08314 [Oceanobacter sp. RED65]
 gi|94426254|gb|EAT11245.1| hypothetical protein RED65_08314 [Oceanobacter sp. RED65]
          Length = 275

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 84/294 (28%), Gaps = 57/294 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADI 68
              S    ++L+S+NI    E +    +     +              + Q   +   D+
Sbjct: 23  FAQSSENSLKLLSFNIQVGIETQAYHQYLTKSWQHLLPQMHRNLALRRIAQVMTHF--DV 80

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           V +QE    +  +    +  +       R  N     S  + +     +  N  + ++  
Sbjct: 81  VGIQEADGGSFRSGHVNQVEYLA-----RQANFPHWYSQLNRNFGPMAKHSNGALCRRQP 135

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
             +           R A+ L       ++ V+ +HL                      Q 
Sbjct: 136 DEVKYHSLPGLLPGRGAMVLDFAD---ELAVVVMHLAL----------------SRRTQQ 176

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + L  ++    E+    V+ GD N   +YL       +      +               
Sbjct: 177 RQLA-FVQTLIETYPQVVLMGDMNTHADYLLGQSPLSELGLQPITKELAT---------F 226

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + + K  +D+ ++ +      +                    +SDH PI+++ 
Sbjct: 227 PSWKPKRALDHILVSEGVQVKRLAV--------------LDVAVSDHLPIAMEI 266


>gi|167756050|ref|ZP_02428177.1| hypothetical protein CLORAM_01570 [Clostridium ramosum DSM 1402]
 gi|237734036|ref|ZP_04564517.1| glycosyl hydrolase [Mollicutes bacterium D7]
 gi|167704042|gb|EDS18621.1| hypothetical protein CLORAM_01570 [Clostridium ramosum DSM 1402]
 gi|229382862|gb|EEO32953.1| glycosyl hydrolase [Coprobacillus sp. D7]
          Length = 1946

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 89/306 (29%), Gaps = 62/306 (20%)

Query: 1   MIR-KYVLALVFFLVPC---------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT 50
           M R K ++A +   V             +    VRL ++NI                   
Sbjct: 1   MRRTKRIIASLVAAVTVISQVMPMMKVTAATDNVRLATFNI---------------AANK 45

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
             D T L +  K  + DIV LQE+    +    +      +        +  K       
Sbjct: 46  KPDITKLNELLKTNNVDIVGLQEVDINTSRNP-YNMLEKFVEQGDYAYSSFQKAIETGGG 104

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              +A+      +      L       +RA  +      +E+NGK I V + HL      
Sbjct: 105 DYGVALLSNLELINTNGGALNSEGIKEARAWQKG----EIEVNGKVIAVYNTHLTY---- 156

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                    S    ++Q   LK  + Q  +     V  GDFN   N    +++ +  ++ 
Sbjct: 157 --------ESVEARAKQLLELKATMDQ--DPAEYKVAFGDFNVDQN----HNEIYPFLED 202

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            +       +     N          +D  +  +N                  +I     
Sbjct: 203 YNIANGKGGKWYDTFNGTDASMKTSAVDNIITSRNL--------------EISNITMVET 248

Query: 291 RLSDHC 296
            LSDH 
Sbjct: 249 DLSDHN 254


>gi|328676925|gb|AEB27795.1| Exodeoxyribonuclease III [Francisella cf. novicida Fx1]
          Length = 262

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 95/306 (31%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N N +        W               ++ K  D D + +QE  +     + 
Sbjct: 2   IKVMTFNANGIRAAARKGFW---------------EWFKTQDVDFLCIQETKAQFHQLEK 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++    +Y       +  +D+    ++  A+  K   +       L   D   R    
Sbjct: 47  DEQHFPDGYY-------YDFKDAVKKGYSGTAIYAKKKPLKIIKELGLDWADDEGRY--- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ + +   +  ++L S    D  +           Q  +  K  + ++ ES  
Sbjct: 97  ------IQFDYENFSIASLYLPSGSSGDMRQ-------EYKMQFLEKYKGILKEQVESGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
            F++ GDFN     +   +                 +   I  N   +   +  + +   
Sbjct: 144 DFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQAWLDHIFDNLGWVDTFRVINHQPLQ 203

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY +        ++ ES         D   R    SDH P+
Sbjct: 204 YTWWSNRGQARANNVGWRIDYHISTPAIKDKVVPES---------DYIYRENWFSDHAPL 254

Query: 299 SIDYDF 304
           +I YDF
Sbjct: 255 TISYDF 260


>gi|324521956|gb|ADY47963.1| 5'-tyrosyl-DNA phosphodiesterase [Ascaris suum]
          Length = 322

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 82/288 (28%), Gaps = 52/288 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
               ++SWN++ L                 + +T +      + A+ VFLQE+       
Sbjct: 79  DAFTVLSWNVDGLD-----------KGNLKTRFTAICYIISKVSAEAVFLQELAPELVPE 127

Query: 82  -KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +      + I  ST                T I ++     +  +  P   +       
Sbjct: 128 LRRNLGGEYSILLSTPSQP----------YFTGILLKPNVEYISHKCIPYANSG------ 171

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R    +  +I   ++ +L+ HL+S             S  +   Q Q     + +  +
Sbjct: 172 MGRAMELVEAKIGNMEVRLLNTHLESM----------KESSEIRKSQLQQCFTQLKEWND 221

Query: 201 SLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                V  GD N + N +G       +       +P        +  D      +    +
Sbjct: 222 GHTLIVFGGDLNIRDNEVGELPEGFLDAWVAAGSNPKCRFTWDTRLND----NKQAGGAR 277

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              D    +       +  SF      +D I+      SDH  I    
Sbjct: 278 CRFDRLFFNGGGVFSSVDFSFE----GQDRIRRTLCFPSDHWAIVAKI 321


>gi|227357889|ref|ZP_03842237.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
 gi|227161999|gb|EEI47017.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
          Length = 306

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 94/324 (29%), Gaps = 65/324 (20%)

Query: 7   LALVFFLVPC-TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
            ++VF+++P  +  V   + + ++NI+                +         +  +NL+
Sbjct: 17  FSVVFYVLPVQSQPVENTLVVATYNIDG---------------KVYGRAAEQSRLLENLN 61

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRV 123
            D+V LQE+  +N   K         +++ E   +               IA+  +    
Sbjct: 62  VDLVGLQEVNHHNRRFKQLKSYDALEYFNKEYFKHQFFGEMSIFAHGGWGIALLSRYKIS 121

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----- 178
             ++  L+  + S  +    +        N + +   D   +    + +           
Sbjct: 122 NTKNIHLVSDETSVYKDEVNQIFANYDPNNAESVRAFDSLYEPDGPMHNGAVAPKSYIHA 181

Query: 179 ------------------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK--INYL 218
                              S +L  QQ + + + +     +    ++  D N     + L
Sbjct: 182 VVNKNGMNIDVYVAHPSFESMALRQQQFKTILEDMDNC--NGKYKILLADTNADQDTHEL 239

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                 ++  +  +                      + ID  ++ +N             
Sbjct: 240 DIFRANYRLANGGEYGWIETFHDKDPM------MKVLSIDNIIVSKNI------------ 281

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
                D+K+    LSDH P+    
Sbjct: 282 --EISDVKAIQSTLSDHYPLVATL 303


>gi|262201711|ref|YP_003272919.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
 gi|262085058|gb|ACY21026.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
          Length = 278

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 86/309 (27%), Gaps = 62/309 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSY 77
            + + + N+N +             +R+ ++   L  +  ++  D+V LQE+      + 
Sbjct: 2   SLTISTINVNGIRA--------AMKQRSEAN-RGLSAWLDDVRPDVVLLQEIRAGREQAQ 52

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A+A V   + W +  S   +  H+           + V  +      +        D+ 
Sbjct: 53  EALAPVLD-DGWHLVMSESVIKGHA----------GVGVLSRVEPSAVRVGFGSDEFDAT 101

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R      +E   +     +    ++L             +     +        + +  
Sbjct: 102 GRY-----LEADFDTPLGALTAASLYLPKGAAQTDEPKDIAKHDEKIRF-MTAFAEHLRG 155

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------------DSLIRFPKEKD 242
                   V+ GD+N         +       P                       ++  
Sbjct: 156 LVRRRRHVVVGGDWNIAHAEADIKNWKGNRKSPGFLPHERDWVGEQLAGGWRDVVREQYP 215

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                      +           IDY + +++  +  ++ +        D   +   R S
Sbjct: 216 DDDGPYSWWSWRGKAFDNDAGWRIDYQLTNRSLAQRAVKATV-------DRAPAYDLRWS 268

Query: 294 DHCPISIDY 302
           DH P+++ +
Sbjct: 269 DHAPVTVKF 277


>gi|120608991|ref|YP_968669.1| exodeoxyribonuclease III Xth [Acidovorax citrulli AAC00-1]
 gi|120587455|gb|ABM30895.1| exodeoxyribonuclease III Xth [Acidovorax citrulli AAC00-1]
          Length = 264

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/277 (9%), Positives = 71/277 (25%), Gaps = 62/277 (22%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +  +      D + +QE+ + +A             + T   +      +    ++ + +
Sbjct: 17  VEAWIAETRPDCICVQEIKAQSA--------DIEGRFETLAGLKGHFHYATKKGYSGVGI 68

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             ++     +        D+  R      VE   +   +K+ ++  +  S       +  
Sbjct: 69  YTRHEPSDVRVGYGSTEFDAEGRY-----VEARFDTPSRKLSIISAYFPSGSSGPERQLA 123

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                +               + +    F++ GD N                        
Sbjct: 124 KFRFLAEFHVHL--------MRVKEEREFILCGDVNIAHQQIDLKNWRSNQKNSGFLPEE 175

Query: 221 NDDFWKTID----PNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNA 266
            +   K +         +  +   +            N+           +DY +     
Sbjct: 176 REWMTKLLHKTDPGGGLVDVYRLLQPDTTETAYTWWSNRGQAYANNVGWRLDYHLATPAI 235

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 ES             + ++ SDH PI++ Y+
Sbjct: 236 AALARTESI-----------YKQQKFSDHAPITVGYE 261


>gi|319406409|emb|CBI80049.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 277

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 73/281 (25%), Gaps = 51/281 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + S+NI+     + +                +      L  DI+ LQE         
Sbjct: 32  DLTIASYNIHKCVGVDKIFNP-----------ARIVHVIAELQTDILALQEADKRFGERT 80

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    +       N       A+  +   V   S   L           
Sbjct: 81  GLIDLQLLKAETGLIPVPLKTMSPNGHGWHGNALFLRQGSVHNISQITLPG------FEP 134

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+ + +++    I V+  H                     +QQ + L   + +   S+
Sbjct: 135 RGAIIVELKMKSGFIRVIATHFGLLRHS-------------RNQQVKMLLALLKKY--SV 179

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GD N         +         +    +         +  +    + +D    
Sbjct: 180 MPTLLIGDLN---------EWRKDKGSSLNFFSPYFDITLGSVPSFPSRFPFLSLDKIFA 230

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +            ++  E+      +  SDH PI    +
Sbjct: 231 FPH----------QLLINVENHYSPLARIASDHLPIKAYLN 261


>gi|184185502|gb|ACC68905.1| DNase X (predicted) [Rhinolophus ferrumequinum]
          Length = 314

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 69/285 (24%), Gaps = 29/285 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+  R+ ++N   L+          +          L +       DI+ LQE+   +  
Sbjct: 25  AEAFRICAFNAQRLTL---------AKVAREHVLDTLVRILARC--DIMVLQEVVDSSDS 73

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           A          F  +    + S        +        ++ +     + +   KD    
Sbjct: 74  AISLLVRELNRFDGSGPYRSLSSPLLGRSTYMEKYVYIYRSQKTQVLDFYVFQDKD---D 130

Query: 140 AGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              R        +  K +  ++ + L +       E        L   Q           
Sbjct: 131 LFAREPFVAQFTLPSKVLPRLVLVPLHTTPKAVEKELNALYDVFLNVSQHWQ-------- 182

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                  ++ GDFN     L         +           + +              I 
Sbjct: 183 ---SKDVILLGDFNADCTSLTKKRLGELQLRTQAGFHWVIADGEDTTVRASTHCAYDRI- 238

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +  +     L   +           +     +SDH P+ ++  
Sbjct: 239 -VLHGERCQSLLHTAAPFNFPRIYGLTEEEALNISDHYPVEVELS 282


>gi|324995051|gb|EGC26964.1| RgfB protein [Streptococcus sanguinis SK678]
 gi|327462906|gb|EGF09227.1| RgfB protein [Streptococcus sanguinis SK1]
          Length = 271

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 67/277 (24%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNELAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREV--LVSEANDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E++G+ + +   HL  +      E                      +  ++  P V+ 
Sbjct: 136 ETEVDGQLLTIASCHLSWWDKGFQGEWAKLE----------------EELLKAETPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHTAAKEAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|170755058|ref|YP_001781240.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B1 str. Okra]
 gi|169120270|gb|ACA44106.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B1 str. Okra]
          Length = 263

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 87/297 (29%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N +               ++       L +     + D++ LQE+        +
Sbjct: 1   MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49

Query: 84  FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           F       F             +  +++        +     +A+  K+    + S+ + 
Sbjct: 50  FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHSVKEKDSFYIS 109

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +KD       R+ ++  +    K I V   HL            ++        QA  L
Sbjct: 110 KSKDKNFWKA-RKIIKCKIFYKNKPILVYSCHLGW----------WNDKEEDFKFQANKL 158

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + + Q        ++ GDFN          D+    +  D       + +         
Sbjct: 159 IEDLKQ----DETCILMGDFNNDAFLNYRGYDYLINKNFKDIYHLARSKDNGVTVIGDID 214

Query: 252 RNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K     + +D  + ++N      +  F+ I             +SDH  +    +
Sbjct: 215 GWKGNTKNMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262


>gi|312890448|ref|ZP_07749985.1| exodeoxyribonuclease III Xth [Mucilaginibacter paludis DSM 18603]
 gi|311297218|gb|EFQ74350.1| exodeoxyribonuclease III Xth [Mucilaginibacter paludis DSM 18603]
          Length = 255

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 87/306 (28%), Gaps = 78/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           ++++++N+N +      +                  + +  DAD+V LQE+ +   V   
Sbjct: 1   MKIITYNVNGIRSAMSKNW---------------LSWLQASDADVVCLQEIKATPDVLTD 45

Query: 82  -KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +  +  +  ++       +S                         +   G   S    
Sbjct: 46  LLLVEQLGYEHYWYPAEKKGYSGTAIFTKQ--------------TPKHIEYGCGISDFDR 91

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R      + ++   + V+ ++  S    D  ++          +      ++I + K 
Sbjct: 92  EGRN-----IRVDFDDVSVMSVYFPSGSSGDERQD-------FKFRFLDEFGEYINKLKW 139

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCN 246
           +    VI+GD+N     +  ++                          +   +  +   +
Sbjct: 140 AYPNLVISGDYNICHRPIDIHNPKSNANSSGFLPAEREWMENLIESGFVDTFRYLNKEPH 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDY +  Q     + + +                R SDHCP
Sbjct: 200 NYTWWSFRANSRAKNLGWRIDYNMATQPLQPLIKRAAIL-----------SEARHSDHCP 248

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 249 VLLELD 254


>gi|302887390|ref|XP_003042583.1| hypothetical protein NECHADRAFT_104616 [Nectria haematococca mpVI
           77-13-4]
 gi|256723495|gb|EEU36870.1| hypothetical protein NECHADRAFT_104616 [Nectria haematococca mpVI
           77-13-4]
          Length = 507

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 87/336 (25%), Gaps = 76/336 (22%)

Query: 8   ALVFFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           A+  F VP       + ++++++S N+            K              ++  + 
Sbjct: 206 AIGVFTVPVVPKGEPLIKELKVMSLNMWNGGTGVTNYHDKQ------------VRFMASS 253

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            ADI+ +QE      + ++     W  + S   +                 +  K   V 
Sbjct: 254 GADIIGIQEDQWGRHIPRLANALGWWGWSSGGDVG----------------ILSKYPIVE 297

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD---------SLEN 175
           +       ++           V + ++ + +++     HL    +             + 
Sbjct: 298 EYGVISGPSRS--------GGVRIELDGDQQQLNFYVAHLGYTPYGPYDTCFSHMSPEKV 349

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNN------------ 221
               + S  + Q +     +    +     P  + GDFN   +                 
Sbjct: 350 IQREAQSGRTPQMEATLRGMKNHLDQADETPVFLVGDFNAPSHLDWVEGLKEKNCGYSNF 409

Query: 222 DDFWKTIDPNDSLIRFPKEKDS-------------RCNANKNLRNKI-PIDYFVMDQNAY 267
                 +     LI   +  +                  N N R     ID+ +    + 
Sbjct: 410 RWPTSVLPEEAGLIDSFRVANPDPVKVQGTTWSPVTIWNNANRREPQDRIDFILHKGKSL 469

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           K     +               +  SDH  +   Y+
Sbjct: 470 KVTDSHTVVVGDPMPIPDTKYNEWFSDHAAVLTTYE 505


>gi|300769904|ref|ZP_07079783.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300762380|gb|EFK59197.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 326

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 92/310 (29%), Gaps = 43/310 (13%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           V+A     +P + +      ++++NI  L E    ++   +          +        
Sbjct: 45  VVAASILELPASNT--GSFSVLTYNIAGLPEPISSAVTPRASS-----IANIGMKINRY- 96

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D+V +QE  +YN            ++ +       ++          +    K      
Sbjct: 97  -DVVNVQEDFNYNR----------ELYSNGNEHPFRTETMGKVPFSDGLNTLSKYPISDI 145

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           Q         +        +V  L       + + +IH  +    D+             
Sbjct: 146 QRIRWKDCTGADCLTPKGFSVVSLQLAKDVFVDLYNIHANAQDTPDAAVARGKN------ 199

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                L  +I +        ++ GDFN   +Y    D+    I     +  +   ++   
Sbjct: 200 --MDQLASFIKEH-SKDRAILLMGDFNA--HYSFELDNVRNFIKETRMIDTWVYLENKGI 254

Query: 246 NANKNLRN-----------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             + +              K  ID  +   +A    I ES++       D    G  LSD
Sbjct: 255 VPHIDPMYSAGDILAIRKDKESIDKIMFRNSADLHFIPESYAIENRLFTDKS--GLPLSD 312

Query: 295 HCPISIDYDF 304
           HC +S+ + +
Sbjct: 313 HCAVSLSFSW 322


>gi|332558916|ref|ZP_08413238.1| Endonuclease/exonuclease/phosphatase precursor [Rhodobacter
           sphaeroides WS8N]
 gi|332276628|gb|EGJ21943.1| Endonuclease/exonuclease/phosphatase precursor [Rhodobacter
           sphaeroides WS8N]
          Length = 240

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 72/282 (25%), Gaps = 54/282 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  + + S+NI+           K        D          LDAD+V LQE       
Sbjct: 3   AADITVASYNIH-----------KGVGTDRRRDLRRTAAVIAELDADLVALQEADRRFGD 51

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        +    +    R   +  H  + + +       Q   L          
Sbjct: 52  RAGLLDLEHLKDETGLVPVKVEGRGRAHGWHGNLLLVRDAEVEEVQKIVLPS-------F 104

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+ + V I G+ + V+  HL                    + Q + L + I     
Sbjct: 105 EPRGALMIDVVIRGRPLRVIAAHLGLLPGS-------------RAAQTRHLLERIE--AS 149

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           S  P ++ GD N         +              F      R   ++           
Sbjct: 150 SPRPTLLMGDLN---------EWRGTGAAMGHLARHFTGGVMVRSFPSRFP--------I 192

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +        L+     ++           +R SDH PI    
Sbjct: 193 LA----LDRLMTCKHGQLHDVSTHDTPLARRASDHLPIKARL 230


>gi|229107611|ref|ZP_04237305.1| hypothetical protein bcere0019_59150 [Bacillus cereus Rock3-28]
 gi|228675841|gb|EEL30992.1| hypothetical protein bcere0019_59150 [Bacillus cereus Rock3-28]
          Length = 315

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 84/324 (25%), Gaps = 61/324 (18%)

Query: 27  VSWNINTLS--EQEGVSLWKNSVKRTTSDYT------------LLRQYAKNLDADIVFLQ 72
           ++WNI   +       +  +   +R T  +T             +         DI+ LQ
Sbjct: 1   MTWNIYFGTILTPLVGTTPEQLPQRVTEVFTLFQATNFPVRAGAIADQIARKIPDIIGLQ 60

Query: 73  EMGSYNAV-----AKVFPKNTWCIFYSTERLINHSKRD------------SNNDIHTAIA 115
           E   +  +           +   I                          S+   +    
Sbjct: 61  EAAIWQLLLPQNSEVAVEYDFVSILLKELEKRGLHYEVLAIVNTTDATLPSSTGFNVRFV 120

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV------------ELLVEINGKKIWVLDIH 163
            R   +            +     A     V             + VEI+GKK  +++ H
Sbjct: 121 DRDAILVRKNSGLKFSNIQTKIFEAFLPVPVGGNVEKLLFGFISVDVEISGKKFRLVNTH 180

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
           L+                  L  Q    ++ +T    + +P V  GDFN   N  G + +
Sbjct: 181 LQPITPGIP---------QTLPIQLAQARELLTGPGATDLPLVFIGDFNSNSNGSGPSYN 231

Query: 224 FWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                   D+     K     C       N   +  + ID  +   N     +      +
Sbjct: 232 LLINAGFKDTWTIAGKGNGLTCCQDANVLNLISQLFVRIDLILFRGNFKVEKVD----VV 287

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
              ++D        SDH  +    
Sbjct: 288 GEEQEDRTPTALWPSDHAGVVASL 311


>gi|320167979|gb|EFW44878.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 879

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 87/286 (30%), Gaps = 53/286 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76
           S A+K+ ++++N+N    + G++               +    +   ADIV LQE     
Sbjct: 407 SGARKLTVLTYNVNWGFCRMGIAS---------QKVVQIAHGIRTSGADIVCLQETHHGW 457

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              +          + +     +       ++              +  +  P+ G+   
Sbjct: 458 EQFLRSSLRDIYPHMIFRHHDTVLPESNSVSSAGGQGFLSVHPLHELWYEQPPVAGSFFP 517

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                      + + + G+ + VL++HL+         +  +   +   ++A+    +  
Sbjct: 518 GWM--------VELVVEGQPVQVLNVHLRPPISNVHKPSFRALFQTSSIRRAELQFFYDR 569

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            K +     ++AGDFN                    +++     +               
Sbjct: 570 MKPKPGSAIIVAGDFNEGH--------------DGAAVVWLKGGRGK------------- 602

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +     LI+     I      + S  + LSDH P+  ++
Sbjct: 603 -------EPLNDSLIEFQPKTIRALNCRVMSEYELLSDHIPVVAEF 641


>gi|300362953|ref|ZP_07059123.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03]
 gi|300353003|gb|EFJ68881.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03]
          Length = 268

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 69/303 (22%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                            +LDADI  +Q+     A    
Sbjct: 15  MKFMSWNVNGLRAALRHGF---------------VNTFTDLDADIFAIQDTR-VEANEVQ 58

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++  +   ++                     +   + +             
Sbjct: 59  IDLPGYYQYWNYAKRKGYAGTAVFTKEK---------PITVANGFGVPEVDGEGR----- 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     + +D+ +          +               L  +         
Sbjct: 105 -----SITLEFPNFYFIDVQVPFSGEKLQRLDFRELWAQTFRNYVTKLMQY--------K 151

Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NK 249
           P +I GD +              +    +  I+  +                        
Sbjct: 152 PVIIGGDMSVAHEKIDLAEPDDNHRHAGFTGIERKEFSELLNAGFIDTFRYFHPDEAKYT 211

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DYF++  N    +I                     SDHCPI +
Sbjct: 212 YWSYREDARAKNIGWRLDYFLVSHNLEDKIINTKIL-----------NNIMGSDHCPIEL 260

Query: 301 DYD 303
           D D
Sbjct: 261 DLD 263


>gi|328881986|emb|CCA55225.1| putative membrane protein [Streptomyces venezuelae ATCC 10712]
          Length = 340

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 88/320 (27%), Gaps = 85/320 (26%)

Query: 1   MIRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47
           ++R+   AL+  L+P               ++    + + + N+N  +     +      
Sbjct: 90  LLRRSATALIALLLPAVVWLNLFGGLVADKSAAGGDLTVATHNVNADNPDPAGT------ 143

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                             AD++ L+E+      A          ++S +  +        
Sbjct: 144 ----------AAQLAASGADVLALEELKGDVVPAYEKGLAEAYPYHSVQGTVG------- 186

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS- 166
                           L    PL   +    + G  RA+   V     ++ V   HL S 
Sbjct: 187 ----------------LWSKLPLRDPQPVDIQMGWTRAMRATVVSPKGEVAVYVAHLPSV 230

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
              L++         S     A  L + I+   +     V+ GD N  +N         +
Sbjct: 231 RVRLNAGFTANQRDNS-----ANALGEAISH--DRHERIVLLGDLNGTMND--------R 275

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
            ++   S +R  +                   ID  ++       +   S   +      
Sbjct: 276 ALNGVTSQLRSTQGAAGDGFGFSWPASFPMARIDQILVKG-----VEPMSSWALPETR-- 328

Query: 285 IKSRGKRLSDHCPISIDYDF 304
                   SDH P++    F
Sbjct: 329 --------SDHLPVAARVKF 340


>gi|319761098|ref|YP_004125035.1| exodeoxyribonuclease iii xth [Alicycliphilus denitrificans BC]
 gi|330822956|ref|YP_004386259.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601]
 gi|317115659|gb|ADU98147.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans BC]
 gi|329308328|gb|AEB82743.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601]
          Length = 266

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/276 (9%), Positives = 76/276 (27%), Gaps = 61/276 (22%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +  +      D + +QE+ + +A             +     +      +    ++ + +
Sbjct: 20  VEAWIDQNRPDCICVQEIKAQSA--------DMQGRFEELAGLRGHFHFAAKKGYSGVGI 71

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             ++      +       D+  R       EL  +   +++ ++  +  S    +  +  
Sbjct: 72  YTRHEPSDVLAGYGSQEFDAEGRYM-----ELRFDTPSRRLSIISAYFPSGSSGEERQLA 126

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------------NYLGN 220
                         L        ++   F++ GD N                        
Sbjct: 127 KYRFLDEFHPHLMRL--------KAEREFILCGDINIAHRQADLKNWRSNQKNSGFLPEE 178

Query: 221 NDDFWKTIDPNDS---LIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNAY 267
                K +  +     +  + + +    +A      N+           +DY +      
Sbjct: 179 RAWMTKLLGDDTDGGLVDVYRRLQPDATDACYTWWSNRGQAYANNVGWRLDYHLATPALA 238

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +    E+             +G++ SDH PI++ Y+
Sbjct: 239 QLARTEAI-----------YKGEKFSDHAPITVGYE 263


>gi|291513858|emb|CBK63068.1| Exonuclease III [Alistipes shahii WAL 8301]
          Length = 318

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 79/302 (26%), Gaps = 56/302 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73
           P T+   + +R +S+NI            +        ++     + K  D D + L E 
Sbjct: 44  PGTSVQPETLRFISYNI-----------LEGMKLDKAQNFDNFVDWVKEKDPDFMALCEC 92

Query: 74  -MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              +  ++  +  +         +         S   I     + +              
Sbjct: 93  NAFTEESLTALAGRYGHPYAILCKESGFPVGLTSKYPIELRNRLLEDVPLW--------- 143

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                       A+   +    K I V+ +HL  F    + +       +   ++   + 
Sbjct: 144 ----------HGAIHTRI----KDINVVVLHLYPFGTYPNGQGAAGTGNTYRDREINCIL 189

Query: 193 DWITQKKESLVPFVIAGDFNR-KINYLG-----NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           D   ++      +++AGDFN                +    +  +              +
Sbjct: 190 DSTIRRYPVEPLWLMAGDFNSYSPKDADAMPANTYFETHSIVLKSGYCDALRDRHSQFFH 249

Query: 247 ANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 N         ID+    Q   + +         +            SDH P+ I
Sbjct: 250 TVPTPYNGESTADQRRIDFIYASQAVMREITDSRIIYDEFTATH--------SDHYPVMI 301

Query: 301 DY 302
           ++
Sbjct: 302 EF 303


>gi|302870082|ref|YP_003838719.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|302572941|gb|ADL49143.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
          Length = 1089

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/375 (9%), Positives = 80/375 (21%), Gaps = 103/375 (27%)

Query: 26  LVSWNINTLSEQEGVSLW--------------------KNSVKRTTSDYTLLRQYAKN-- 63
           + ++N+  L +                             S +   +   +  +      
Sbjct: 607 IATYNVENLYDYRDDPFDGCDFAGNTGCPGVSPPFDYVPASPEAYAAKLAVQARQIVQSL 666

Query: 64  LDADIVFLQEMGSYNAV--------------AKVFPKNTWCIFYSTERLINHSKRDSN-- 107
              D++ +QE    +                A   P     +  +       +   +   
Sbjct: 667 HSPDLILVQEAEDQDICSVVDGALACGDTNNADGAPDTVQELALAIAANGGPAYAAAYDR 726

Query: 108 -----NDIHTAIAVRKKN----------------VRVLQQSYPLLGAKDSFSRAG----- 141
                  I +A   R                     V  +S  L    D  +        
Sbjct: 727 TGADARGIASAFLYRTDRLTLAEATAADPLLGSAPTVQYRSAALPSNADVQNPKALNAVL 786

Query: 142 ----------------NRRAVELLVEINGKK-----IWVLDIHLKSFCFLDSLENTYSPS 180
                            R A      +           +  +        DS        
Sbjct: 787 PADVDRSTGVDGSNVYTRAAQVARFTVKAGPGSTERFTLWAVANHFSSGPDSRVGQRREQ 846

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWKTIDP- 230
            +  +   Q ++       +     V  GD N                 +D      +  
Sbjct: 847 AAYGAAIVQAVEA-----SDPNARVVYGGDLNVFPRPDDPIATAQNPTPSDQLAPLYEAG 901

Query: 231 -NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL--YNEDDIKS 287
            ++      K+  +   +         +D   ++   +  L+Q   + I   Y  D  + 
Sbjct: 902 LHNLWDDLVKDAPASAYSYTFSGQAQTLDNLFVNDPMHDDLVQVRTAHINADYPTDAPEL 961

Query: 288 RGKRLSDHCPISIDY 302
             +  SDH P    +
Sbjct: 962 GDRGASDHDPQVARF 976


>gi|253581466|ref|ZP_04858691.1| dnase I homologous protein dhp2 precursor [Fusobacterium varium
           ATCC 27725]
 gi|251836536|gb|EES65071.1| dnase I homologous protein dhp2 precursor [Fusobacterium varium
           ATCC 27725]
          Length = 274

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 93/308 (30%), Gaps = 44/308 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K     ++FL+       +   + S+N   L              ++  DYTL  Q  
Sbjct: 1   MKKIKFIYIYFLLTVIIFAQEGY-IASFNTLRLG-------------KSQKDYTLTAQAL 46

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKN 120
           +    DIV L E+       K+            +  I+      ++   + A   +K  
Sbjct: 47  EMF--DIVGLVEVMDIEGAEKLVNALEKVSGEKWDYHISPFPVGKNSYKEYFAYVWKKDK 104

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V+ L++       +D       R       +I       + +         S+      +
Sbjct: 105 VKFLKERGFYKDVED----KFARPPYGADFKIGKFDFTFVLV--------HSVFGKNESA 152

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---WKTIDPNDSLIRF 237
               + +   + D+           +IAGDFN                K I     +I+ 
Sbjct: 153 RRAEAFKMNEVYDYFQNMDLQENDIIIAGDFNLSGFDESFEKLLSHSDKIIYALSPVIKT 212

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              K S  N+          D   +     K    +S   + + +   K    ++SDH P
Sbjct: 213 TLGKKSLANSY---------DNMFLSTIYTKEFTGKS-GALDFTQGQYKLMKDKISDHLP 262

Query: 298 --ISIDYD 303
             I ++  
Sbjct: 263 IFIVVEIS 270


>gi|166208515|gb|ABY84902.1| DNA lyase [Beauveria sp. GN-2004a]
          Length = 576

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 71/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VR----------KKNVRVLQQSYPLLGAKDSFSRA-GNRRAVELLVEINGKKIWVLDIHL 164
           +R                L +  P       +      R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGILCPPKSNTLYRDLPGDKQIGGYPTLNQLRGNVDEALLDSEGRYVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    ++AGD N            
Sbjct: 124 FVLFRVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVILAGDLNIIRSEMDSSNIG 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +     +                      +     
Sbjct: 184 ESLRKEGISMDEWQSMPTRRILNQLLFEGTVVGDRDDDRGRAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|326331357|ref|ZP_08197647.1| endonuclease/exonuclease/phosphatase [Nocardioidaceae bacterium
           Broad-1]
 gi|325950613|gb|EGD42663.1| endonuclease/exonuclease/phosphatase [Nocardioidaceae bacterium
           Broad-1]
          Length = 374

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 69/263 (26%), Gaps = 21/263 (7%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             + +    L A++  + E      +          +       +   + +    I   +
Sbjct: 117 ENIARVFAELRAEVAVVVEADDRPGLHMFSETLLPEVGAEAYEQVMVVEGNDERGIDVGV 176

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSL 173
            V      V  +++     +D      +R   E  +E   G +I VL  H KS  + +  
Sbjct: 177 MVGDGYRLVQLRTHIF--DRDEAGVIFSRDCCEYHLEAPSGARIVVLANHFKSKGYSEKG 234

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFW-KTIDPN 231
                       +QA  + +      E       IAGD N                +   
Sbjct: 235 ---DPQGAKRRGRQATRVAEIYRGLLEEGIEHICIAGDLNDSPASESLKPLLSVDGLVDA 291

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE-----SFSEILYNED--- 283
                +          + N  +K  IDY ++                        +D   
Sbjct: 292 SEHEHWDWNHRRGTYGSGNEDDK--IDYLLLSPTLRAKQTGGGVFRKGVWHGPRTKDPWD 349

Query: 284 ---DIKSRGKRLSDHCPISIDYD 303
               + +     SDH  +  D+ 
Sbjct: 350 LFPTLTAEQHAASDHACLYADFT 372


>gi|238059911|ref|ZP_04604620.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
 gi|237881722|gb|EEP70550.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
          Length = 300

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 75/316 (23%), Gaps = 58/316 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY---------------AKNLDADI 68
           + + ++N+   +         +                                    ++
Sbjct: 5   LSVATYNLYQGAGTIPAYAAPSLPAMAVELRRAFATMEASGFPERAAAIAGELAAHRPEL 64

Query: 69  VFLQEMGSYNAVAKV---------------FPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           V +QE+  +    +V                P  T     +T    +     +      A
Sbjct: 65  VGIQEVAYWRCGDRVYDFLEILRTELAAAGAPYRTAATAITTPLAAHTDGDVAGVTDRVA 124

Query: 114 IAVRKKNV-----RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
           + VR           + ++   +           R      V +  + + V+  H ++F 
Sbjct: 125 LLVRADLPAGAAGEQIYRTRIEMPVPSGLVAIKTRGFAWADVRVGDRPVRVVSTHFEAFD 184

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                         +   Q   L D +     + VP ++ GDFN   +            
Sbjct: 185 PD------------IRLAQVGELIDVLDA---AGVPAIVLGDFNAVPDDEPYRLLRKHGF 229

Query: 229 DPNDSLI--RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
               +            R +          +DY +          + +   +        
Sbjct: 230 RDAWTEANGDADGFTGVRADIAGPSDVWQRLDYVMHRG------TELTAGAVTLLGAGRL 283

Query: 287 SRGKRLSDHCPISIDY 302
             G+  SDH  +   +
Sbjct: 284 PSGRWPSDHAGLVAAF 299


>gi|257068362|ref|YP_003154617.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810]
 gi|256559180|gb|ACU85027.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810]
          Length = 244

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 72/280 (25%), Gaps = 50/280 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WN+  L                  D   L +  ++L  D++ +QE     A   V
Sbjct: 8   LRILTWNLWELRG----------------DIAALIEAVEDLQPDVLLVQE-----APRFV 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P      F                 +            + + ++P+       +    R
Sbjct: 47  LPTARLQWFARRIGRRVLLGGAGGRGLAILGTDEVAAQVIRRGTHPVAQTLSDLNSTYPR 106

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + + I G    V+     +    +                A+ L   +     +  
Sbjct: 107 GVAAVRLSIPGGGAAVVASTHLALQEDN------------RRHHAEHLAALVR---GAGA 151

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GD N                                 +          ID  ++ 
Sbjct: 152 PVIVGGDLNETAQGAARR----------FLAPLLADPAAQTEHTFPAASPTRRIDAVLVT 201

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + A           +   +   ++R    SDH P  +D +
Sbjct: 202 EGARVL----EARAVRSTDRVEEARLAGASDHLPTLVDVE 237


>gi|219684183|ref|ZP_03539127.1| exodeoxyribonuclease III [Borrelia garinii PBr]
 gi|219672172|gb|EED29225.1| exodeoxyribonuclease III [Borrelia garinii PBr]
          Length = 255

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 84/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ +    DI+ +QE  +    + +
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVQEYTPDILCIQETKALKEQLPR 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +            
Sbjct: 46  DLILENYYSYFSKSKIKGYSGVCIYSK---------------VKPIAVNLLGKEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +           +  +  L +  F +S                 ++++ I       
Sbjct: 91  RGLIA----------YYDNFVLINGYFPNSQALRRR--LVYKLNFLSYVENLIDSLVNGG 138

Query: 203 VPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              VI GDFN                    Y+       + ++           K+    
Sbjct: 139 KNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETTWLDRFLNKGYVDTFRIFNKEPGYY 198

Query: 247 ANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              + R +         IDYFV+++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWSYRTRARERNMGWRIDYFVVNEFFKRNVKKSLILDKV-----------MGSDHCPVF 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEL 250


>gi|171463328|ref|YP_001797441.1| Endonuclease/exonuclease/phosphatase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192866|gb|ACB43827.1| Endonuclease/exonuclease/phosphatase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 250

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 91/292 (31%), Gaps = 52/292 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--G 75
            S + +  ++S N++             S     S    LR+  +    D++FLQE+   
Sbjct: 3   TSNSSRFTVLSMNVH----------KGLSPLHRHSTIYQLREKMRTHYPDLLFLQELQQE 52

Query: 76  SYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
               V +       + T  +     +  ++ K     D H   A+  K+ +    +Y + 
Sbjct: 53  HRGRVRRFGQWPMAELTHFLSEEFWQHWHYGKNVEYRDGHHGNAILSKHPQQKGNNYDIS 112

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  R  +R  +  +  I+G    +    +    F                +Q + +
Sbjct: 113 A-----YRFESRGLLHSVTRIDGVDKSIHCFCVHLALF-----------ERGRERQLEAI 156

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              I Q      P ++AGDFN         +     +        F     S      ++
Sbjct: 157 IGHI-QDLTGGGPTIVAGDFNDW------RNRVSAPMKAAGFDEVFEMLTSSPAKTFPSV 209

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +P+D   +               +  +   I     +LSDH  I+ + +
Sbjct: 210 KPLLPMDRIYVRG-------------LKVHSAQILHEWLKLSDHLGITAELE 248


>gi|29420515|dbj|BAC66501.1| DNA lyase [Cordyceps militaris]
          Length = 624

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 77/327 (23%), Gaps = 74/327 (22%)

Query: 36  EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFY 93
                + +     R    +  +    +   ADIV +QE  +   +    +     W +++
Sbjct: 2   ASGFRNPFGYQPWREKRTFQAMFDILE---ADIVVMQETKIQRKDLQDDMVLVPGWDVYF 58

Query: 94  S-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR-------- 144
           S  +    +S         T   +  +   +     P             R         
Sbjct: 59  SLPQHKKGYSGVAIYTRNATCAPILAEEGVLGILCPPKSNTPYRELPEDQRIGGYPTSNQ 118

Query: 145 ----AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                 E L++  G+ + VL+        + S  N             + L   I     
Sbjct: 119 LSGNVDEALLDSEGRCV-VLEFPAFVLFGVYSPANRDESRIEFRQSFVEALDARIRNLIT 177

Query: 201 SLVPFVIAGDFN----------------------RKINYLGNNDDFWKTIDPNDSLIRFP 238
           +    ++ GD N                       +   L     F + +     +    
Sbjct: 178 AGKQVILTGDLNIVRSELDSSNVAEGLIKEGMTMDEWQSLPARRIFNQLVFEGTVIGDRD 237

Query: 239 KEKDS------------------RCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFS 276
             ++                    C   K           IDY +       +++  +  
Sbjct: 238 TGREHAVLWDICRCFHPRRVGMHTCWDTKRNTRPANVGSRIDYILCSDGIKDWIVDSNIQ 297

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
                       G   SDHCP+     
Sbjct: 298 -----------EGLMGSDHCPVYATMS 313


>gi|229171215|ref|ZP_04298808.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
 gi|228612295|gb|EEK69524.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
          Length = 263

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 76/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLI 99
                L +  +  + D++ LQE+               +    +  +    +      + 
Sbjct: 18  EKIKYLAKVIQEEEYDVIALQEVSQSIQAGNVCGNKKEDNFGLLLLEELKALHVKDYNIT 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  K+  V + ++ +   KD+      R+ V   +  N K I  
Sbjct: 78  WDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWK-TRKIVSATIAYNDKNITF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            ++        Q   L   +     S     + GDFN      G
Sbjct: 137 YSCHLGW----------WNDEEESFKDQVNRLMGRVD----SNELSFLMGDFNNNARLQG 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              ++       D+     ++ +      +            ID  + +Q+      +  
Sbjct: 183 EGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQSEKVRSSKVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F+    N          +SDH  + +  D
Sbjct: 243 FNGTNRNV---------ISDHFGVEVQVD 262


>gi|326554511|gb|ADZ89150.1| Endonuclease/exonuclease/phosphatase family [Brucella melitensis
           M5-90]
          Length = 271

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 67/284 (23%), Gaps = 53/284 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + S+N++     +                         ++AD++ LQE       
Sbjct: 19  GGDIVIASYNVHKCIGIDKQFNP-----------QRTADVISEINADVIALQEADRRFGE 67

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +  +             +  +   V       L         
Sbjct: 68  RSGLLDLGLLERRHGLVPVPITATMPKGHGWHGNVLLLREGVVRNVQQLKLPG------V 121

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+   ++     + V+  HL                     QQA+ +   +   + 
Sbjct: 122 EPRGALVADLQFPAGPLRVIAAHLGLLK-------------RSREQQAETILSALQ--EA 166

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDY 259
             +P ++ GD N                  + S +       +    +   R  +  +D 
Sbjct: 167 DTLPTLLIGDLNEW----------RIGKRSSLSALMPTFNHVATAVPSFPSRFPVLALDR 216

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +              + I   E       +  SDH PI    D
Sbjct: 217 VL----------GAPDNLITSVEVHNTPLARLASDHLPIKAHLD 250


>gi|187922295|ref|YP_001893937.1| endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans
           PsJN]
 gi|187713489|gb|ACD14713.1| Endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans
           PsJN]
          Length = 268

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/310 (10%), Positives = 72/310 (23%), Gaps = 74/310 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++++N        G                       +L  D+  +QE   ++A   
Sbjct: 3   TLTVLTYNTLFAGRDGGD----------DRRAQAQVGLINDLRPDVFLMQEAKGFDA--- 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                          +            + AI +R+          PL    D  +    
Sbjct: 50  -NGGAWLHALEQQIAMRGFLAVAPRTGQNIAIFIREPL-------RPLGFEADGANFHHT 101

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + + V  +   +  +  HL                  +  ++A     ++       
Sbjct: 102 LATLRVAVPGSELPVTFISAHLCPNGP------------EIRRREAA----YLAVHAAPE 145

Query: 203 VPFVIAGDFN-RKINYLGNNDD----------------------FWKTIDPNDSLIRFPK 239
              ++ GDFN    +     D                           ++    +    +
Sbjct: 146 RLTLVTGDFNSASPHDSEPEDWAALAPHHRARYVADDLQGIDRSVLAHLEAAGWVDLGQE 205

Query: 240 EKDSRCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +          +      +  DY +            S+  I  +  D        S
Sbjct: 206 LDAAGVPTVPTAAYRDAEFATMRCDYLLASSGLAAK--ARSYQVIRNSITDT------AS 257

Query: 294 DHCPISIDYD 303
           DH P+   ++
Sbjct: 258 DHYPVLATFE 267


>gi|254374251|ref|ZP_04989733.1| exodeoxyribonuclease III [Francisella novicida GA99-3548]
 gi|151571971|gb|EDN37625.1| exodeoxyribonuclease III [Francisella novicida GA99-3548]
          Length = 262

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 95/306 (31%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N N +        W               ++ K  D D + +QE  +     + 
Sbjct: 2   IKVMTFNANGIRAAARKGFW---------------EWFKTQDVDFLCIQETKAQFHQLEK 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++    +Y       +  +D+    ++  A+  K   +       L   D   R    
Sbjct: 47  DEQHFPDGYY-------YDFKDAVKKGYSGTAIYAKKKPLKIIKELGLDWADDEGRY--- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ + +   +  ++L S    D  +           Q  +  K+ + ++ ES  
Sbjct: 97  ------IQFDYENFSIASLYLPSGSSGDMRQ-------EYKMQFLEKYKEILKEQVESGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
            F++ GDFN     +   +                 +   I  +   +   +  +     
Sbjct: 144 DFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQAWLDHIFDDLGWVDIFRVINHEPLQ 203

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY +        ++ ES         D   R    SDH P+
Sbjct: 204 YTWWSNRGQARANNVGWRIDYHISTPTIKDKVVPES---------DYIYRENWFSDHAPL 254

Query: 299 SIDYDF 304
           +I YDF
Sbjct: 255 TISYDF 260


>gi|125536384|gb|EAY82872.1| hypothetical protein OsI_38085 [Oryza sativa Indica Group]
          Length = 498

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/301 (9%), Positives = 76/301 (25%), Gaps = 51/301 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NA 79
           +  +++++N+           W +           L    KN + D++  QE+       
Sbjct: 227 KTFKIMTYNV-----------WFHEDLELCRRMDALGDLIKNHNPDLICFQEVTPNIYLL 275

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + K      +    S    +                   K         P   +      
Sbjct: 276 LQKSDWWQEYRCSLSNSMAMQRKYY---------CMQMSKLPVESFDCTPFSNS------ 320

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      V+  G  + ++         +           +    QA      +   +
Sbjct: 321 IMGRELCVAHVKTGG-AVKLVLATSHLESPMPGPPTWDQMYSTERVAQANKSLKILGSFR 379

Query: 200 ESLVPFVIAGDFNRKINYLGNND----DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                 +  GD N      G            I+       +  +  +    + N + + 
Sbjct: 380 N----VIFCGDMNWDDKGDGPFPLPAGWTDAWIELKPGEDGWTYDTKANSMLSANRKLQK 435

Query: 256 PIDYFVMDQ------NAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDY 302
            +D   + +      N+ + + + +   + Y ++    +  R        SDH  + +  
Sbjct: 436 RLDR-FVCKLADFKINSIQMIGKNAIPGLSYVKEKKVRKEVRKLELPVLPSDHFGLVLSI 494

Query: 303 D 303
            
Sbjct: 495 T 495


>gi|71999724|ref|NP_001023608.1| CCR (yeast CCR4/NOT complex component) homolog family member
           (ccr-4) [Caenorhabditis elegans]
 gi|22859088|emb|CAD45610.1| C. elegans protein ZC518.3c, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 597

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 96/351 (27%), Gaps = 74/351 (21%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  +     S   +          L+ +  +  +AD++ LQE+ +    
Sbjct: 210 TFTVLCYNVLCDKYATVNQYSYCPSWALNWEYRKGLIIKEIRTYEADVITLQEVETEQFR 269

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLL------- 131
               P+     +       + +K     +       A+  K  +       L        
Sbjct: 270 TLFQPELKQLGYAGIFEAKSRAKTMGEEERKYVDGCAIFWKVDKFDMDKQYLFEFSSVAM 329

Query: 132 ----GAKDSFSRAGNR--RAVELLVEIN---------------------GKKIWVLDIHL 164
                +++  +R   R    +  +++I                      G  + V   H+
Sbjct: 330 KKASTSENMLNRVMPRDNIGLCAVLKIKESVYANKFLGRMQIPMNDNVVGNPLVVATAHI 389

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT---QKKESLVPFVIAGDFNRKINYL--- 218
                     +       +L+ +   + + ++   Q  +  VP +I GDFN   +     
Sbjct: 390 HW---DPEFCDVKLVQSMMLTHEVSRVLEEVSKKYQITQQQVPVLICGDFNSLPDSGVFE 446

Query: 219 -------GNNDDFWKTIDPNDSLIRFPKEKDSRC-----------------NANKNLRNK 254
                         K+   +  L +F    D                      N  L  K
Sbjct: 447 YLSKGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYTLDFK 506

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDD---IKSRGKRLSDHCPISIDY 302
             IDY      +   L      +  + + +           SDH PI   Y
Sbjct: 507 GMIDYIFATPQSLARLGILGPFDPQWVQSNKILGFPHPHVASDHIPIMAQY 557


>gi|12718343|emb|CAC28578.1| related to CCR4 protein [Neurospora crassa]
          Length = 766

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/338 (10%), Positives = 81/338 (23%), Gaps = 52/338 (15%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +   +++++++WNI  +  +                     + Q  ++ D D++ LQE+
Sbjct: 388 VSPSLERIKVMTWNILCDKFATTNMYGYTPTGALSWEYRKERILQEIRDRDVDMLCLQEI 447

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPL 130
            +        P+     +         +K  +  D       AI  +     +L +    
Sbjct: 448 ATDVFRDFFSPELAQNDYKGVHWPRPKAKTMNEKDAAAVDGCAIFYKGSKWILLDKQLID 507

Query: 131 L-----------GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                          D F+R   +    +    E       V+  +          +   
Sbjct: 508 YANIAINRPDMKNQHDIFNRVMPKDNIGIICFFESRRTGARVIVANTHLAWEPTLADVKL 567

Query: 178 SPSCSLLSQQAQWLKD--------WITQKKESLVPFVIAGDFNRKINYLGN--------- 220
             +  L+      +              +  + +P ++ GD+N                 
Sbjct: 568 VQTAILMENITNDIPKPEMPEPGPSQEYRSNTDIPLIVCGDYNSTQESSVYELLSMGRVT 627

Query: 221 ---------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-Q 264
                           D          + +      D     N     +  IDY      
Sbjct: 628 PEQSDFGGHQYGNFTRDGVAHPFSMRSAYVHLNGTPDELSFTNYVPGFQEVIDYIWYSTN 687

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +     +               +DH  I  ++
Sbjct: 688 TLEVVELLGPPDQNHLKRVPGFPNYHFPADHIQIMAEF 725


>gi|302919090|ref|XP_003052788.1| hypothetical protein NECHADRAFT_78136 [Nectria haematococca mpVI
           77-13-4]
 gi|256733728|gb|EEU47075.1| hypothetical protein NECHADRAFT_78136 [Nectria haematococca mpVI
           77-13-4]
          Length = 653

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/351 (13%), Positives = 81/351 (23%), Gaps = 87/351 (24%)

Query: 24  VRLVSWNINT-----------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            RL +WN  T            +     + +     R    +  +    +   ADIV +Q
Sbjct: 3   FRLTTWNGETPLKLQDSPAYTFTVNGIRNPFGYQPWREKRTFQAMFDILE---ADIVVMQ 59

Query: 73  E--MGSYNAVAKVFPKNTWCIFYSTERLI---NHSKRDSNNDIHTAIAVR---------- 117
           E  +   +   ++     W +F+S  +      +S             +R          
Sbjct: 60  ETKIQRKDLHDEMVLVPGWDVFFSLPKHKKVQGYSGVAIYTRNSKCAPIRAEEGVTGILT 119

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
                   +  P       + R G    +  E  ++  G+ + +       F  + S  N
Sbjct: 120 PPKSTTKFRDLPPDQQIGGYPRPGQLDGIIDEATLDSEGRCVILEFPGFVLF-GVYSPAN 178

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------------------R 213
                    S   Q L   I          ++ GD N                       
Sbjct: 179 RDETRDDFRSGFFQALDVRIRNLVADGKQVILTGDLNVVRSAMDSTNVAEMLRKEDISLD 238

Query: 214 KINYLGNNDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNLR-------- 252
               +     F + I                            R   N            
Sbjct: 239 DWLNMPVRRIFNQLIFEGKVVGERDEGREEPVLWDLCRCFHPERAGMNTCWDTKRNTRPA 298

Query: 253 -NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N   IDY +       +    +              G   SDHCP+   +
Sbjct: 299 NNGSRIDYILCSDGIKDWFTFSNIQ-----------EGLMGSDHCPVFATF 338


>gi|227432019|ref|ZP_03914038.1| exodeoxyribonuclease III [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352217|gb|EEJ42424.1| exodeoxyribonuclease III [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 285

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/307 (8%), Positives = 80/307 (26%), Gaps = 59/307 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++ +SWNI++++        ++   R    ++ L +    +  D+  +QE    +   
Sbjct: 12  ENLKFISWNIDSINA-----AVEHKSVRGEMTWSTLNE-IATIRPDVFAIQETKLKS--T 63

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  K    I         +    +    ++   V  K   +  +               
Sbjct: 64  GLTKKQATAIAELFPEYHLYVNSSTARSGYSGTMVLSKVEPIQVE--YPTIGAPGPMDLE 121

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      + +     ++  ++  +                   +  + L        ++
Sbjct: 122 GRI-----ITLEFPTFFLSTVYTPNSGSSLIRLPERGEWDDKYREYIKRL--------DA 168

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             P + +GD N                         + +  +        F        +
Sbjct: 169 TKPVIFSGDMNVAHQEIDLKNPKPNRHSAGFTDQEREKFSALLDAGFTDTFRSLNPDTPS 228

Query: 247 ANKNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                           +   IDY+++     + + +    +    +           DH 
Sbjct: 229 VYTWWAQISKTSKINNSGWRIDYYLVSDRIAENVTESCVIDTGARQ-----------DHA 277

Query: 297 PISIDYD 303
           PI ++ +
Sbjct: 278 PILLEIN 284


>gi|13540877|ref|NP_110565.1| exonuclease III [Thermoplasma volcanium GSS1]
 gi|14324259|dbj|BAB59187.1| exodeoxyribonuclease [Thermoplasma volcanium GSS1]
          Length = 252

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 71/306 (23%), Gaps = 79/306 (25%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++  + +SWN+N L                           +N D   + +QE       
Sbjct: 2   SETKKFLSWNVNGLRAVIKSGG---------------LDLIRNGDYFAIAMQE---TKVD 43

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K  P+  + + Y                 ++      +   +             F   
Sbjct: 44  VKSVPEEMYHLGYHVYNNPAK------RKGYSGTMTLSREKPIDVS--------YGFESE 89

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R      + +     + ++ +  +     +  +            A  L+        
Sbjct: 90  EGRI-----LNLEFDNFYFINAYFPNSQHGLTRLDLKLDFDKKFLGYANDLRK------- 137

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCN 246
              P +I GDFN     +          +                   +   +   +   
Sbjct: 138 -KKPLIICGDFNVAHEEIDIARPKDNEHNAGFTIEERTWMSQFLSSGYVDTFRLFTTDGG 196

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           IDYFV+  +    +                    + SDH P
Sbjct: 197 HYSWWSYRFNAREKNIGWRIDYFVVSDDIKDKVKASRIL-----------ENVKGSDHAP 245

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 246 VELEID 251


>gi|219685209|ref|ZP_03540029.1| exodeoxyribonuclease III [Borrelia garinii Far04]
 gi|219673305|gb|EED30324.1| exodeoxyribonuclease III [Borrelia garinii Far04]
          Length = 254

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 84/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ +    DI+ +QE  +    + +
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVQEYTPDILCVQETKALKEQLPR 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +            
Sbjct: 46  DLILENYYSYFSKSKIKGYSGVCIYSK---------------VKPIAVNLLGKEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +           +  +  L +  F +S                 ++++ I       
Sbjct: 91  RGLIA----------YYDNFVLINGYFPNSQALRRR--LVYKLNFLSYVENLIDSLVNGG 138

Query: 203 VPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              VI GDFN                    Y+       + ++           K+    
Sbjct: 139 KNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETTWLDRFLNKGYVDTFRIFNKEPGYY 198

Query: 247 ANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              + R +         IDYF++++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWSYRTRARERNMGWRIDYFIVNEFFKRNVKKSLILDKV-----------MGSDHCPVF 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEL 250


>gi|260816574|ref|XP_002603045.1| hypothetical protein BRAFLDRAFT_130644 [Branchiostoma floridae]
 gi|229288361|gb|EEN59057.1| hypothetical protein BRAFLDRAFT_130644 [Branchiostoma floridae]
          Length = 554

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/348 (10%), Positives = 93/348 (26%), Gaps = 68/348 (19%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           +     N  ADI+ LQE+ +     
Sbjct: 187 FSVMCYNVLCDKYATRQIYGYCPSWALGWEYRKKGILHEILNFTADIISLQEVETEQYHT 246

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131
              P+     +       + +K   + +       AI  +    +++++           
Sbjct: 247 FFLPELRQHGYDGIFSPKSRAKTMGDTEKKYVDGCAIFFKTNKFQLVKEHLVEFNKMAME 306

Query: 132 ---GAKDSFSRAGNR--RAVELLVEINGK------------KIWVLDIHLKSFCFLDSLE 174
              G+ D  +R   +    +  L+E                   ++ +      +     
Sbjct: 307 NAEGSADMLNRVMTKDNIGIAALLETKDGFAETSAYPPEVNPRQLVLVANAHMHWDPEFS 366

Query: 175 NTYSPSCSLLSQQAQWLKDWI---------TQKKESLVPFVIAGDFNRKINY-------- 217
           +       +     + + +            +   S VP +  GD N   +         
Sbjct: 367 DVKIIQTMMFMSALKNIMEEACHSFRPGSSNKMDISNVPVIFCGDLNSLPDSGVVEYLAT 426

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC-----------------NANKNLRNKIPI 257
                ++ DF +             +                      + N     K  I
Sbjct: 427 GRISTSHLDFKELAYSECLGNFSCADHKPSEVTHSFKLKQAYESDILPHTNYTFDFKGVI 486

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
           DY    +      +   +    ++E+ I         SDH P+  +++
Sbjct: 487 DYIFHSELLTCLGVLGPYDPHYFSENKIIGCPHPHIPSDHIPLLSEFE 534


>gi|307320300|ref|ZP_07599718.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
 gi|306894022|gb|EFN24790.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
          Length = 257

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 79/300 (26%), Gaps = 70/300 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                    +L  +    + D+V LQE+ + +     
Sbjct: 1   MKIATFNINGVN----------------KRLDILLTWLGTAEPDVVCLQELKATDG---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  ++   +     L G     S   +R
Sbjct: 41  ------QFPRAAIEAAGYGAVWRGQAAWNGVAILARDREPVLTRTGLPGDS---SDTQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I +  ++  +       +  Y  +  L   Q            E+ V
Sbjct: 92  YIEAAV-----NGILIASLYAPNGNPQPGPKFDYKLAWHLRFNQHAA------ALLETGV 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR--CN 246
           P V+AGD+N                           ++++     L    K         
Sbjct: 141 PVVLAGDYNVVPEPRDIYPTRSYDDNALVQPESRAAFRSLVDQGWLDALRKIHPKEQLFT 200

Query: 247 ANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                RN+        +D+            +          D      +  SDH P+ +
Sbjct: 201 FWDYRRNRWQRDAGLRLDHI-------LLSRKLRRRLTGAGIDREIRALEGSSDHAPVWV 253


>gi|312213235|emb|CBX93317.1| similar to endonuclease/exonuclease/phosphatase family protein
           [Leptosphaeria maculans]
          Length = 440

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/315 (11%), Positives = 93/315 (29%), Gaps = 35/315 (11%)

Query: 2   IRKYV--LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           +R  +   AL   +    A  +     +++N+  L      +         T++   + Q
Sbjct: 1   MRSLLSVTALTASISHAFAQDSGTFNTLTFNVAGLPAVLNGNDVPGDK---TANTARIGQ 57

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                +  ++ +QE  +Y+A         +       R          + ++T      +
Sbjct: 58  LFTRYNISLIHVQEDFNYHA-------TLYENDKHPFRTPTSGGVPIGSGLNT--LSNYE 108

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYS 178
                +  +      DS      +    + V+   G  I   ++H  +            
Sbjct: 109 FAAFERVKWNDCSNTDSADCLTPKGFTFMRVKLAAGVWIDAYNLHADAGTTT-------- 160

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
              +  +   + + D+I  +       ++ GD N +     +    +K  +         
Sbjct: 161 ADNTARASNLRQVSDYIKSRSI-GNAVLVFGDSNSRYTRKDDIPFVFKDENGMTDAWVEH 219

Query: 239 KEKDSR---------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
             K +          C+          +D      +    L  + F      +  ++  G
Sbjct: 220 IRKGNPPAPNTPALLCDNPSPNATCEIVDKTWYRGSPALTLKAKRFQ--YAGDMFLQDDG 277

Query: 290 KRLSDHCPISIDYDF 304
             LSDH  + +D+++
Sbjct: 278 NVLSDHNGVLVDFEW 292


>gi|149177784|ref|ZP_01856384.1| Endonuclease/exonuclease/phosphatase [Planctomyces maris DSM 8797]
 gi|148843434|gb|EDL57797.1| Endonuclease/exonuclease/phosphatase [Planctomyces maris DSM 8797]
          Length = 375

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/288 (10%), Positives = 82/288 (28%), Gaps = 64/288 (22%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +    +++R+++ N+                 +  +D   + +       DIV L E+ +
Sbjct: 115 SQDSEKRLRILTANV----------------LQKNTDAAAVLELIDREQPDIVVLCEV-N 157

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              ++ + P      ++ T  L N       +++    A  +  V+    S         
Sbjct: 158 QRWISDLSPLERTYSYHLTHPLDNTYGIAFYSNLRVKSAEVRGLVKKEIPSID------- 210

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                       ++  +GK++ +  +H       +      +                + 
Sbjct: 211 ----------ATILLRSGKEVRLFAVHPNPPRPGEDTTKRDAELV------------LVG 248

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           ++       ++ GD N        N   ++ +     L               +   + P
Sbjct: 249 REVSKNRSAIVLGDLNDVGWSRTTN--LFQEVS--GLLDPRKGRGLFATYDATSWIWRYP 304

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +DY  +  +            + Y            SDH P+ ++  +
Sbjct: 305 LDYLFVSDDFR----LSEIRTLPYI----------GSDHFPLLVELSY 338


>gi|16265144|ref|NP_437936.1| exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021]
 gi|15141283|emb|CAC49796.1| probable exodeoxyribonuclease III protein [Sinorhizobium meliloti
           1021]
          Length = 257

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 79/300 (26%), Gaps = 70/300 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                    +L  +    + D+V LQE+ + +     
Sbjct: 1   MKIATFNINGVN----------------KRLDILLTWLGTAEPDVVCLQELKATDG---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  ++   +     L G     S   +R
Sbjct: 41  ------QFPRAAIEAAGYGAVWRGQAAWNGVAILARDREPVLTRTGLPGDS---SDTQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I +  ++  +       +  Y  +  L   Q            E+ V
Sbjct: 92  YIEAAV-----NGILIASLYAPNGNPQPGPKFDYKLAWHLRFNQHAA------ALLETGV 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR--CN 246
           P V+AGD+N                           ++++     L    K         
Sbjct: 141 PVVLAGDYNVVPEPRDIYPTRSYDDNALVQPESRAAFRSLVDQGWLDALRKIHPKEELFT 200

Query: 247 ANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                RN+        +D+            +          D      +  SDH P+ +
Sbjct: 201 FWDYRRNRWQRDAGLRLDHI-------LLSRKLRRRLTGAGIDREIRALEGSSDHAPVWV 253


>gi|225705642|gb|ACO08667.1| Deoxyribonuclease gamma precursor [Oncorhynchus mykiss]
          Length = 306

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 78/288 (27%), Gaps = 33/288 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +++ S+N+  L           S     +    L +        +  + E+         
Sbjct: 1   MKVASFNVRRLGT---------SKVADKNVLKYLIKIVSRYS--VFLILEVVDRTGEAMT 49

Query: 79  -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + ++           T        RD+  +       R+ +V++    Y     +   
Sbjct: 50  TFLKELNDTRANKKHPYTMVKSTRLGRDTYKEQFV-FLYREDHVKLTDS-YQYKDNQVGD 107

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             A  R    L        +  L +        DS++        +             +
Sbjct: 108 EDAFAREPYILRFTCLNTVLKDLVLIPVHTKPEDSVKELDELYDVVKVV----------K 157

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           +K      +I GDFN   +Y+         I  +        +         N      I
Sbjct: 158 RKWKTDNIMILGDFNADGSYVTKKGMTNIRIRSDKKFHWVIGDDVDTTANTSNDHTYDRI 217

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS--DHCPISIDYD 303
              +   +  + ++  S     Y++    S    LS  DH P+ ++  
Sbjct: 218 --VMYGDDMLEAMVPNSAKPFNYHKAFHLSEAMALSISDHYPVEVELT 263


>gi|62085796|gb|AAX63289.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFGGTVFGDRDDDRERAVLWDICRCFHPTRLGMYT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|25150706|ref|NP_502355.2| CCR (yeast CCR4/NOT complex component) homolog family member
           (ccr-4) [Caenorhabditis elegans]
 gi|21654883|gb|AAK85706.1| CCR4 [Caenorhabditis elegans]
 gi|22859086|emb|CAB54511.2| C. elegans protein ZC518.3a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 606

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 96/351 (27%), Gaps = 74/351 (21%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  +     S   +          L+ +  +  +AD++ LQE+ +    
Sbjct: 219 TFTVLCYNVLCDKYATVNQYSYCPSWALNWEYRKGLIIKEIRTYEADVITLQEVETEQFR 278

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLL------- 131
               P+     +       + +K     +       A+  K  +       L        
Sbjct: 279 TLFQPELKQLGYAGIFEAKSRAKTMGEEERKYVDGCAIFWKVDKFDMDKQYLFEFSSVAM 338

Query: 132 ----GAKDSFSRAGNR--RAVELLVEIN---------------------GKKIWVLDIHL 164
                +++  +R   R    +  +++I                      G  + V   H+
Sbjct: 339 KKASTSENMLNRVMPRDNIGLCAVLKIKESVYANKFLGRMQIPMNDNVVGNPLVVATAHI 398

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT---QKKESLVPFVIAGDFNRKINYL--- 218
                     +       +L+ +   + + ++   Q  +  VP +I GDFN   +     
Sbjct: 399 HW---DPEFCDVKLVQSMMLTHEVSRVLEEVSKKYQITQQQVPVLICGDFNSLPDSGVFE 455

Query: 219 -------GNNDDFWKTIDPNDSLIRFPKEKDSRC-----------------NANKNLRNK 254
                         K+   +  L +F    D                      N  L  K
Sbjct: 456 YLSKGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYTLDFK 515

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDD---IKSRGKRLSDHCPISIDY 302
             IDY      +   L      +  + + +           SDH PI   Y
Sbjct: 516 GMIDYIFATPQSLARLGILGPFDPQWVQSNKILGFPHPHVASDHIPIMAQY 566


>gi|22537705|ref|NP_688556.1| exodeoxyribonuclease [Streptococcus agalactiae 2603V/R]
 gi|76788417|ref|YP_330186.1| exodeoxyribonuclease III [Streptococcus agalactiae A909]
 gi|76799526|ref|ZP_00781659.1| exodeoxyribonuclease III [Streptococcus agalactiae 18RS21]
 gi|77408314|ref|ZP_00785056.1| exodeoxyribonuclease III [Streptococcus agalactiae COH1]
 gi|22534594|gb|AAN00429.1|AE014263_8 exodeoxyribonuclease [Streptococcus agalactiae 2603V/R]
 gi|76563474|gb|ABA46058.1| exodeoxyribonuclease III [Streptococcus agalactiae A909]
 gi|76585123|gb|EAO61748.1| exodeoxyribonuclease III [Streptococcus agalactiae 18RS21]
 gi|77173077|gb|EAO76204.1| exodeoxyribonuclease III [Streptococcus agalactiae COH1]
          Length = 275

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 80/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSESTRALMSR------QVIDTLVAEDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++    L+  S  +     +       +       S+P + A  +    G  
Sbjct: 55  KHLEVLETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  ++  ++  +                  ++    L        +S  
Sbjct: 114 -----IITLELENCYITQVYTPNAGDGLKRLADRQIWDIKYAEYLATL--------DSQK 160

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N     +                     +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSAGFTAEERQGFTNLLAKGFTDTFRYLHGDVPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 SWWAQRSRTSKINNTGWRIDYWLTSNRVADKITKSEMIHSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 ILEIE 274


>gi|256851997|ref|ZP_05557384.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260661433|ref|ZP_05862346.1| metal-dependent hydrolase [Lactobacillus jensenii 115-3-CHN]
 gi|282931878|ref|ZP_06337357.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           jensenii 208-1]
 gi|297205131|ref|ZP_06922527.1| endonuclease/exonuclease/phosphatase [Lactobacillus jensenii
           JV-V16]
 gi|256615409|gb|EEU20599.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260547888|gb|EEX23865.1| metal-dependent hydrolase [Lactobacillus jensenii 115-3-CHN]
 gi|281303989|gb|EFA96112.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           jensenii 208-1]
 gi|297149709|gb|EFH30006.1| endonuclease/exonuclease/phosphatase [Lactobacillus jensenii
           JV-V16]
          Length = 369

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 92/334 (27%), Gaps = 61/334 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKN------------------SVKRTTSDYTL 56
               S  +   + ++N+   +     S + +                  S     +D   
Sbjct: 50  SSVLSTGKTYTVTTYNVGFGAYNPKYSFFMDTGEMKNGTKTRGKYGTAVSKASELADTKG 109

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                K  + D  F QE+ + +   + F  N   +  ST   +  S   + +  + A+ +
Sbjct: 110 AIATIKKQNPDFAFFQEIDTNS--TRSFGVNQVKMAESTFNNMGSSFAQNFHSAYIALPL 167

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSF---CFL 170
              +         L     + S          +        +   V+ + +K+      +
Sbjct: 168 NNPHGFARSGILALSKYHITSSERRQYFVSSNLIEKFVDLDRCFNVMRLPVKNGKELVLI 227

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------NYLGNN 221
           +S  + Y        +Q   L   +  + +     +  GDFN            +    +
Sbjct: 228 NSHMSAYDKGGLSKKKQLALLNQVMKAEIKKGNYVICGGDFNHAFGAKYVAHFKSQQKQH 287

Query: 222 DDFWKTIDPNDSL-------IRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKF 269
           D     +   D              ++   C  +             +D F++  N    
Sbjct: 288 DWL-AVLSQKDLASSGMKMVTAKNADEVPTCRGSDIPYKKGVTYTTIVDGFLVSPN---- 342

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   + YN D   +     SDH P+ + + 
Sbjct: 343 -----VKAVSYNIDTQFAY----SDHNPVKLSFS 367


>gi|62085798|gb|AAX63290.1| DNA lyase [Beauveria bassiana]
 gi|62085850|gb|AAX63316.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRFEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFGGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|326335669|ref|ZP_08201855.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325692098|gb|EGD34051.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 253

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 91/290 (31%), Gaps = 51/290 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ +WN+                K+ T    L+ +  K ++ADI+ L E     ++A+++
Sbjct: 3   KIATWNVE-------------RPKKGTEKTALVMEEIKEVNADILVLTESAVSISLAELY 49

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P +   + Y                        +++   +   + +    ++F       
Sbjct: 50  PFSIHSLAYERTP--------------------EEHWVSIFSKWKITKQIETFDNFRT-- 87

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KE 200
               +VE    K+ V    +       S                + L     +     ++
Sbjct: 88  -TCAVVETPFGKVIVFGTIIPYHQAGVSGVRYGCLGYKQWEYHEKDLHQQAKEWGRILEQ 146

Query: 201 SLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRN 253
             +P +I GDFN+          +   + +    S +      +   ++  +      + 
Sbjct: 147 EGLPILIKGDFNQSRYNNQGYGTEKVRQILSDYLSQLDLTCITECDLSSFLHIDPIKHKV 206

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  ID+  +  +  + +            D     GK +SDH  + + ++
Sbjct: 207 RNNIDHICISNSLIRKVKGYQVGAW----DHFSEEGKYMSDHNGVFVSFE 252


>gi|270159291|ref|ZP_06187947.1| exodeoxyribonuclease III [Legionella longbeachae D-4968]
 gi|289165885|ref|YP_003456023.1| exodeoxyribonuclease [Legionella longbeachae NSW150]
 gi|269987630|gb|EEZ93885.1| exodeoxyribonuclease III [Legionella longbeachae D-4968]
 gi|288859058|emb|CBJ12987.1| putative exodeoxyribonuclease [Legionella longbeachae NSW150]
          Length = 260

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 88/303 (29%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N N +        +               ++    DAD V +QE        ++
Sbjct: 1   MKVISFNANGIRSAARNGFY---------------EWLVTQDADFVCIQETKVQP--DQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +       R        +    ++ +A+  +N  +           D+  R    
Sbjct: 44  IPEEIYY-----PRDYYCDYYSAQKKGYSGVAIYARNKPLRVIKGIGFDYCDNEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ +  K  ++ ++L S    +  +        +  Q  +   + + Q K    
Sbjct: 96  ------IQFDYPKFSIVSLYLPSGTSGEQRQ-------EVKYQFLEQFANHLMQLKNEGR 142

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD+N                    L     +   +      +   +  +      
Sbjct: 143 ELIICGDYNIAHKEIDLKNWKSNRKNSGFLPEERAWMDELFGGMGFVDAFRVHNQEEEQY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY V+     + ++                R  RLSDH P+ 
Sbjct: 203 TWWSFRGRAWEKNVGWRIDYQVVTPGFIEDVVYSHI-----------FRDVRLSDHAPLL 251

Query: 300 IDY 302
           I+Y
Sbjct: 252 IEY 254


>gi|302875724|ref|YP_003844357.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulovorans
           743B]
 gi|307689155|ref|ZP_07631601.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulovorans
           743B]
 gi|302578581|gb|ADL52593.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulovorans
           743B]
          Length = 263

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 77/269 (28%), Gaps = 41/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK---NTWCIFYSTERLINHSKRDSNN 108
                L +  K    D++ LQE+       ++F     + +      E         S  
Sbjct: 18  EKIKNLARVIKKNAYDVITLQEVSQSKDSEQMFKDIKKDNYVFLLVEELGKLGVYDYSFF 77

Query: 109 DIHT---------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
             +            A+  K+     ++  L  ++D  +    R++V+ ++E   K+I +
Sbjct: 78  WEYNHISSGKYEEGTAILTKHPVGKIETSFLSISEDYSNWK-TRKSVKNIIEYKNKEIAI 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
                    + DS             QQA  L + +           + GDFN       
Sbjct: 137 F--CCHLGFWDDSE--------EPFKQQADRLLEQVK----ENELTFLMGDFNSDALKRN 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKI--PIDYFVMDQNAYKFLIQES 274
              D+  +    D+     ++      + K     +N     ID  +             
Sbjct: 183 TGYDYLMSKGLYDTYNMAKEKDLGITVSGKIAGWEKNDEQKRIDLIL---------TNTP 233

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                            +SDH  + ++ +
Sbjct: 234 VEVKYSRVIFNGENESIVSDHYGLEVEIE 262


>gi|332212986|ref|XP_003255600.1| PREDICTED: sphingomyelin phosphodiesterase 2 [Nomascus leucogenys]
          Length = 423

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 71/291 (24%), Gaps = 41/291 (14%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           I  L+      L K+   R       L  +      D+  L+E+ S      +  K +  
Sbjct: 11  IFNLNCWGIPYLSKHRADR----MRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLS-- 64

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRA 145
                      +    +  I + + V  K+       +                   +  
Sbjct: 65  ------PTYPAAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAV 118

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
             L++ I+G  +     HL +               +    QA  L  +I    +     
Sbjct: 119 GLLVLHISGMVLNAYVTHLHA-----EYNRRKDIYLAHRVAQAWELAQFIHHTSKKADVV 173

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--------------NL 251
           ++ GD N             K            ++       N                 
Sbjct: 174 LLCGDLNMHP--EDLGCCLLKEWTGLRDAYLETRDFKGSEEGNTMVPKNCYVSQQELKPF 231

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + IDY +  +    F I      +     +    G  LSDH  +    
Sbjct: 232 PFGVRIDYVLY-KAVSGFYISC--KSLETTTGNDPHSGTPLSDHEALMATL 279


>gi|319939581|ref|ZP_08013940.1| exodeoxyribonuclease III [Streptococcus anginosus 1_2_62CV]
 gi|319811170|gb|EFW07476.1| exodeoxyribonuclease III [Streptococcus anginosus 1_2_62CV]
          Length = 275

 Score = 69.6 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 81/305 (26%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q    LDADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLVRLDADIIAIQETKLSANGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   +L   S  D     +       KN      ++P +GA  S   A  R
Sbjct: 55  KHLTILEELFPNYQLTWRSSIDPARKGYAGTMFLYKNNLTPIITFPEIGAP-STMDAEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +                  +     L        +   
Sbjct: 114 I-----ITLEFDNFFVTQVYTPNAGDGLKRLVERQVWDQKYADYLTTL--------DEKK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHNEIDLAHPSSNRRSPGFTDEERSGFTNLLNRGFTDTFRYIHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 SWWAQRSKTSKINNSGWRIDYWLTSNRIADKVTKSEMIDSGTRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIE 274


>gi|289450353|ref|YP_003474896.1| endonuclease/exonuclease/phosphatase family protein [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184900|gb|ADC91325.1| endonuclease/exonuclease/phosphatase family protein [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 372

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 90/316 (28%), Gaps = 52/316 (16%)

Query: 20  VAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
              ++  +S+NI               G  +  +S+     +   + +  + L AD  FL
Sbjct: 57  ADSELSFLSYNIGYAGLGEEQDFFMDGGKMVRPDSINDVHKNLHGISKQLQLLPADFYFL 116

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+   +  +       + +  +           S         +      + Q +  L 
Sbjct: 117 QEVDEDSHRS-------YNVEQTAYLSKALDLGYSFAYNFKCNYIPYPWPPIGQVASGLQ 169

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD---------SLENTYSPSCS 182
                      R A+ +  +   + + +    L +   ++         +L      +  
Sbjct: 170 TLSTYEISGAERIALPVPFKWPVRLVNLKRCLLVNRYPIEKSDHQLVAVNLHLEAYDNGE 229

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNR----KINYLGNNDDFWKTIDPNDSLIRFP 238
             + Q++ L++++ ++ E     V  GD+N+      +    N +FW             
Sbjct: 230 GKTAQSKMLQEFLQKEYEKGNYVVAGGDWNQVLPGAPDIPVKNTNFWHPPKLAADDFAPD 289

Query: 239 KEKDSRCNANKNLRNKIPI------------DYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +         N  N  PI            D F++  N             +   D   
Sbjct: 290 WKFAVDTKKYTNRLNDQPIKGRENDAQYFSLDGFLVSPNVEI--------VDVAVADVGF 341

Query: 287 SRGKRLSDHCPISIDY 302
                  DH P+ +  
Sbjct: 342 KYA----DHLPVRLVI 353


>gi|260578461|ref|ZP_05846375.1| exodeoxyribonuclease III [Corynebacterium jeikeium ATCC 43734]
 gi|258603483|gb|EEW16746.1| exodeoxyribonuclease III [Corynebacterium jeikeium ATCC 43734]
          Length = 266

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 80/305 (26%), Gaps = 69/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                RT  D   +R++ +  D D++ LQE          
Sbjct: 1   MRIATWNIN--------------SVRTRED--RVREFLQRSDVDVLCLQETKCT------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       + +          +A+  +      Q+    G           
Sbjct: 39  ------DKQFPDFTDTGYEQAHFGLHSFNGVAILSRVGLTDVQT--DFGQPGFNKDLDAE 90

Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +A+E   +      + V  +++ +   +     +Y                    +++S 
Sbjct: 91  QALEARAIGAICGGVEVWSLYVPNGREIADPHYSYKLRWLDALAAYAAGSGVGASQRKSS 150

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
               + GD+N                  +   N     + ++            D     
Sbjct: 151 EKLCLVGDYNIAPRDEDVWDRSYFDGRTHVTPNERARLRALEDAGLSAATDLIADE---- 206

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + ID                 +      D  + +GK  SDH P+
Sbjct: 207 YTYWDYQAMRFQKGEGMRID----------LQYARGITPTAARVDRDERKGKGASDHAPV 256

Query: 299 SIDYD 303
            +DY+
Sbjct: 257 IVDYN 261


>gi|302690596|ref|XP_003034977.1| hypothetical protein SCHCODRAFT_43911 [Schizophyllum commune H4-8]
 gi|300108673|gb|EFJ00075.1| hypothetical protein SCHCODRAFT_43911 [Schizophyllum commune H4-8]
          Length = 261

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 81/309 (26%), Gaps = 84/309 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +R+ +WN+  L+  +                     Y +  D DI+ L E   +   V  
Sbjct: 3   MRIAAWNVCGLATSQKKGFKF---------------YVEAEDPDILVLSETKVNNETVDP 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +     ++S     ++          +  A+  K+  +      L G  D     G 
Sbjct: 48  ALKERFPHSYWSIAEKKSY----------SGTAILSKHKALSVTRT-LPGHPDPNYTKGR 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 +V +  +  +V+  ++ +        N  +      +   + L        +  
Sbjct: 97  ------IVTLEFENTYVVGTYVPNAGTGLKTLNEKNLWNEHFTTYIRDL--------DKK 142

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTI------------------------DPNDSLIRFP 238
            P +  GD N     +   +                              + +   I   
Sbjct: 143 KPVIWTGDLNVAPTAIDLANPKTNWNKTPGYTEAETTAFKNILTPPSNAPEDSPRFIDVW 202

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +              +           +D FV+ +   + +      + +Y         
Sbjct: 203 RHLHPDTQHYTYFSYRFRCREKNLGWRLDMFVLSERLLEKVKMCEIRDEIY--------- 253

Query: 290 KRLSDHCPI 298
              SDHCP+
Sbjct: 254 -GASDHCPV 261


>gi|295398413|ref|ZP_06808453.1| RgfB protein [Aerococcus viridans ATCC 11563]
 gi|294973366|gb|EFG49153.1| RgfB protein [Aerococcus viridans ATCC 11563]
          Length = 278

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 84/307 (27%), Gaps = 61/307 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L++ N ++  E+                   + Q     D D+V LQE+       +V
Sbjct: 1   MKLLTLNTHSYGEEN-----------QDQKLAFIAQSIAEWDIDVVGLQEVNQKIIGHRV 49

Query: 84  FPKNTWCIFYST------------------------ERLINHSKRDSNNDIHTAIAVRKK 119
             KN                                          +++ +   +A+  K
Sbjct: 50  DVKNIVNFVPMDGQVNVKEDNFAMRLVALLAELGKTYYWAWAMTHIAHDTMQEGVAILSK 109

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                  SY  +    ++     RR +   +     + ++      S+            
Sbjct: 110 YPIDSVTSY-NVSKSHNWYDYKTRRILTAKITKPNGESFMAVSGHFSWWHG--------E 160

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +      + Q  + ++     + +P    GDFN      G +      I   DS     +
Sbjct: 161 NNEEFHYEWQETEKYL---TRTKLPIYFMGDFNNPAGTDGYDYMVSTAIPITDSYTIAEE 217

Query: 240 EKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                           L+ +I IDY  +          +  +           R + +SD
Sbjct: 218 TVGGPTVLKEIGGWTGLKEQIRIDYIFV---------PKGVAVKKSEVVFDGERQQAVSD 268

Query: 295 HCPISID 301
           H  + ++
Sbjct: 269 HSGVLVE 275


>gi|324517012|gb|ADY46703.1| Unknown [Ascaris suum]
          Length = 323

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/329 (9%), Positives = 79/329 (24%), Gaps = 57/329 (17%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F +V C  +   +  ++++N               S K   +    + ++   +  DIV 
Sbjct: 14  FSVVECLPNSQNEFTVMTFNTW------------QSGKNVENGLFKVAKHISYVYPDIVA 61

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ +   + ++                     ++ +   TAI  R   +     +   
Sbjct: 62  LQEIENETVIGQLIKMLGRRW---------SGVANNYSYPDTAILTRHPIINNSIATTAR 112

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-----SLENTYSPSCSLLS 185
                      NR      + ++ +       + K   +             +     + 
Sbjct: 113 SVGAKILLPIHNRTVQIYSLHLDYRSYGPYAANNKLVSYATQIMAGERNIDGNGRFENMR 172

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-------------------- 225
           +           K+    P ++ GDFN   +     +                       
Sbjct: 173 EFILDDGFRRAVKRSKEEPLLVCGDFNAPSHLDWTEETKDLHGGWVFDWPATKMLQGEAA 232

Query: 226 ----------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                       +    +     ++  S          +  ID+        + +   ++
Sbjct: 233 MEDSFRKLHPNPLLKTGNTWSTVEKTTSAGWGWTIPEPQDRIDFIFYKSPLLEPINSYTY 292

Query: 276 SEILYNEDD-IKSRGKRLSDHCPISIDYD 303
                             SDH  +   + 
Sbjct: 293 QGRDVVWPKPYHWHNDYPSDHFAVVTKFT 321


>gi|315221911|ref|ZP_07863822.1| exodeoxyribonuclease III [Streptococcus anginosus F0211]
 gi|315188877|gb|EFU22581.1| exodeoxyribonuclease III [Streptococcus anginosus F0211]
          Length = 275

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q    LDADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLS------QAVLQTLVRLDADIIAIQETKLSANGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S  +     +       K     + ++P +GA  +    G  
Sbjct: 55  KHLKVLDELFPHYETTWRSSIEPARKGYAGTMFLYKENLSPKITFPEIGAPSTMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +V  ++  +                  +     L        +   
Sbjct: 114 -----IITLEFDNFFVTQVYTPNAGDGLKRLEDRQIWDKKYADYLTAL--------DIEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F        N  
Sbjct: 161 PVLATGDYNVAHNEIDLAHPSSNRRSPGFTDEERSGFTNLLNRGFTDTFRYIHGDIPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 221 SWWAQRSKTSKINNSGWRIDYWLTSNRIADKVTKSEMIDSGTRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 VLEIE 274


>gi|212275738|ref|NP_001130134.1| hypothetical protein LOC100191228 [Zea mays]
 gi|194688370|gb|ACF78269.1| unknown [Zea mays]
 gi|195625836|gb|ACG34748.1| endonuclease/Exonuclease/phosphatase family protein [Zea mays]
          Length = 391

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 83/298 (27%), Gaps = 45/298 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +  +++++N+    E   +           S    L    K    D +  QE+       
Sbjct: 116 KTFKIMTYNV-WFREDLEL----------RSRMDALGDLIKQHCPDFICFQEVT------ 158

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + +   ++    ++   S+ +         +  ++  +    +   +S     
Sbjct: 159 ----PYIYMLMQKSDWWQQYTCLLSHENAIQMPYYCMQLSKMPTKPSDCIPFSNSTMGRE 214

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A     EI   K+ +   HL+S C                  QA+   + +     +
Sbjct: 215 LCIASVRTGEI--TKLILATTHLESPCPAPPKW--DQMYSKERVAQAKQSLEILGGFPNA 270

Query: 202 LVPFVIAGDFNRKINYLGNND----DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
               ++ GD N      G            ++       +  +  +    + N + +  +
Sbjct: 271 ----ILCGDMNWDDKGDGPFPLQDGWTDAWVELKPGEDGWTYDTKANGMLSGNRKLQKRL 326

Query: 258 DYFVMD------QNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHCPISIDYD 303
           D FV         +      +       + E  I+   +R       SDH  + +   
Sbjct: 327 DRFVCKLADFKMDSIEMIGKEAIPGVSYFKEKKIRKENQRIELPVFPSDHFGLVLTIT 384


>gi|319745559|gb|EFV97861.1| exodeoxyribonuclease III [Streptococcus agalactiae ATCC 13813]
          Length = 275

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 79/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSESTRALMSR------QVIDTLVAEDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++    L+  S  +     +       +       S+P + A  +    G  
Sbjct: 55  KHLEVLETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +  ++  ++  +                  ++    L        +S  
Sbjct: 114 -----IITLELENCYITQVYTPNAGDALKRLGDRQIWDIKYAEYLATL--------DSQK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N                           +  +        F        N  
Sbjct: 161 PVLATGDYNVAHKEIDLANPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +         +           DH PI
Sbjct: 221 SWWAQRSRTSKINNTGWRIDYWLTSNRVADKITKSEMIHSGDRQ-----------DHTPI 269

Query: 299 SIDYD 303
            ++ +
Sbjct: 270 ILEIE 274


>gi|312130303|ref|YP_003997643.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
 gi|311906849|gb|ADQ17290.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
          Length = 363

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 88/283 (31%), Gaps = 33/283 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------GS 76
              L+S+NI   +     S   + + +       + +     +ADI   QE         
Sbjct: 102 DFSLLSYNIMYANFNGNESTNGDKITKG------IGETVVGQNADIKCFQEFYNDSKNFD 155

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           Y+ + +   KN + ++  +++  +  +        +   + +K       +   L + D 
Sbjct: 156 YDLIRRTAEKNPYYVYMHSQQGNDKGQGTIGLATFSIYPIIRKEEMYWPTNNNGLLSTDI 215

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                  R +   ++  G ++  +  H  +     ++        S    +   L+ WI 
Sbjct: 216 VVNGDTIRVINFQLKSMGIRVNKVFDHGLNKVETKNILVQLKNGFSERGNEVNILESWIN 275

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
              +S  P +IAGD N               ++       F +E        + +   + 
Sbjct: 276 ---KSPYPVIIAGDLNELPYGYAYGKLRRLLLNA------FEEEGRGFGFTYRKILRFLR 326

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           ID              E F  + +          + SDH P+ 
Sbjct: 327 IDNQF--------FEAEKFKIVRFKTLH----EYKYSDHYPLL 357


>gi|241622384|ref|XP_002408944.1| 2-phosphodiesterase, putative [Ixodes scapularis]
 gi|215503086|gb|EEC12580.1| 2-phosphodiesterase, putative [Ixodes scapularis]
          Length = 542

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 85/335 (25%), Gaps = 46/335 (13%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEG-------VSLWKNSVKRTTSDYTLLRQYAKNLD 65
               + +   K R +S+N+   +  +         S              LL +      
Sbjct: 210 CFTASYTDPGKFRCMSYNLLADAYADSKFAKTVLFSYCPEHALDIAYRKQLLIKEILGYK 269

Query: 66  ADIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
            D++FLQE+        +  +   + +C  Y+ ++                 AV   +  
Sbjct: 270 TDLMFLQEVDRRMFSQDLEPILRSHGYCGSYTEKKSPMAEGVACFFRGCKFRAVDGCSKL 329

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLV---------------EINGKKIWVLDIHLKSF 167
           +           D   +      +                   E  G+ + V + HL  +
Sbjct: 330 LSSALVDEPALADIKHKIAENARLLARFVSRPTAFQVLLLEPLEKPGRLLLVANTHL-YY 388

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------- 216
                        C +     +WL+   +++   +   + AGDFN               
Sbjct: 389 HPDSDHIRLLQAYCCIRL--LEWLRREYSERFGVVPAVIFAGDFNSCPAFGVYQLLTSGS 446

Query: 217 -YLGNNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVMD-QNAYKF 269
                 D      +    L    K   +         N     K  +DY   D +   + 
Sbjct: 447 VSEDCEDWCSNADEAVSGLRAVQKIPLASACGVPVYTNYTPNFKGCLDYIFYDYEQLLRE 506

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +     +    + +        SDH        +
Sbjct: 507 EMVPMPLQEEIEKHEGLPSILFPSDHVAQVATLRW 541


>gi|158338869|ref|YP_001520046.1| hypothetical protein AM1_5782 [Acaryochloris marina MBIC11017]
 gi|158309110|gb|ABW30727.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 290

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 76/308 (24%), Gaps = 68/308 (22%)

Query: 2   IRKYVLALV------FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           I   +L L+      +  +P   S    +R++++NI   +                    
Sbjct: 43  IATLILILIVAPVINWVGLPQLGSTPDGMRVMAYNIWIDNPNT----------------D 86

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            + Q  +  D DI+FL E+                     E     S         +  A
Sbjct: 87  AIAQSIQGEDPDILFLSEVSKP---------------MMAELQSRLSYPHDYRTEGSNNA 131

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  +   +   +          +      ++   +++ G  + ++ IH            
Sbjct: 132 LFSRYPILEATTNDFGVTTKGRT-----FSLVAKLQVEGNPVTIIGIHPPVPIIPGFFHI 186

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                          L  +    +      ++ GDFN              +   N    
Sbjct: 187 RNR-----------QLDTFAKASQSIEGKLIVLGDFNATPWSPYFQRFERISQLQNSGHR 235

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           ++                KIP+D+                    +      +     SDH
Sbjct: 236 QWIWATWYFNQTLTTRYIKIPLDHI---------------ETRGFTVLKTWTGQTGGSDH 280

Query: 296 CPISIDYD 303
            PI    +
Sbjct: 281 KPIVTVLE 288


>gi|330799773|ref|XP_003287916.1| hypothetical protein DICPUDRAFT_47628 [Dictyostelium purpureum]
 gi|325082050|gb|EGC35545.1| hypothetical protein DICPUDRAFT_47628 [Dictyostelium purpureum]
          Length = 576

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/334 (9%), Positives = 81/334 (24%), Gaps = 66/334 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------- 74
            +++++S+N    ++                    +     N   DI+  QE+       
Sbjct: 254 NQIKVMSYNTWNFNDP------------WRERRVKMADVILNESPDIICFQEIRYSSWTS 301

Query: 75  --------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                              + K+  +      ++   L +     +       +A+  K+
Sbjct: 302 EAPFKSSVRKGEERNQVQHIWKLLSERNQKYHFT--YLPSMVYNTNTGLQFEGLAIFSKH 359

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                 S  L     +   A  R  +   V +    + +           +  +     S
Sbjct: 360 PITDISSIKLSREVMNADDAHQRSLLRAQVYLKQHDLNINVFTSHFSLEAEGSKRNAYES 419

Query: 181 CSLLSQQAQ--WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----KTIDPNDSL 234
              +++  +       +  +  +     + GD+    +     D +     + ++ N + 
Sbjct: 420 LKYINEFPKPHLFMGDLNLEPSANAIQYLIGDYEINNHAGNLKDTWMEYSSRKLEENSNQ 479

Query: 235 IRF--------------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---------- 270
             +                  +              IDY     +    +          
Sbjct: 480 DIYLDQLRNQVHSDCKITDYLNGYTFPTLYGAPNKRIDYLFRSNDNNLKVLDFHIKGRCK 539

Query: 271 -IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            I    S       +  S     SDH  I   ++
Sbjct: 540 EIPALSSSSSKTSTNSDSNHLYPSDHTSIVTTFE 573


>gi|296471069|gb|DAA13184.1| deoxyribonuclease-1-like 1 precursor [Bos taurus]
          Length = 281

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 71/288 (24%), Gaps = 33/288 (11%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           AS A+  R+ ++N   L+          +          L +       DI+ LQE+   
Sbjct: 23  ASGAETFRICAFNAQRLTL---------AKVAREPVLDTLVKILARC--DIMVLQEVVDS 71

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLLGAKDS 136
           +  A          F  +    +HS        +        ++     +   +   +D 
Sbjct: 72  SDTAIPLLLRELNRFGDSGPYASHSSLLLGRSTYKEKYVYLYRSHEAEVRDSYMYDDQD- 130

Query: 137 FSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 R        +  K    + ++ +H         L   Y        +       
Sbjct: 131 --DLFTREPFVCWFSLRSKVLPSLVLVPLHTTPKAVETELNALYDVFLDASGRW------ 182

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                       ++ GDFN     L         +           +             
Sbjct: 183 -------QTKDVILLGDFNADCTSLTKKRLDDLVLRTQAGFHWAIADGVDTTVRASTHCT 235

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              I   +  +     L   +  +   +    +     +SDH P+ +D
Sbjct: 236 YDRI--VLHGELLQSLLRGAAAFDFPQSFGLTEQEALNISDHYPVEVD 281


>gi|242049990|ref|XP_002462739.1| hypothetical protein SORBIDRAFT_02g031100 [Sorghum bicolor]
 gi|241926116|gb|EER99260.1| hypothetical protein SORBIDRAFT_02g031100 [Sorghum bicolor]
          Length = 618

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 81/346 (23%), Gaps = 83/346 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           V++V++N+N L  +                   LR+    LDADI+  QE  +   +  A
Sbjct: 2   VKIVTYNVNGLRPRVAQHG-------------SLRRLLDALDADIICFQETKLSRQDLSA 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSN----------------------NDIHTAIAVRKK 119
            V     +  F S  R        S                        +  T +    K
Sbjct: 49  DVIMAEGYEAFVSCNRSSKGRGAYSGVATFCRVTSSFSSQEVALPVAAEEGFTGLQDYAK 108

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC-FLDSLENTYS 178
           N   +      +  ++       R  + L V+  G+ I     H   F  +  ++E    
Sbjct: 109 NSETVGDFIIAMPVEEEGLGEITREDL-LRVDNEGRCIITDHGHFVLFNIYGPAVEEDDK 167

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------DFWK 226
                     + L+              + GD N     +   D                
Sbjct: 168 ERVRFKLLFYKILQKRWEHLLALGKRVFVVGDLNIAPASIDRCDAPPGFEKQMFRVWMRS 227

Query: 227 TIDPNDSLIRFPKEKDSRCNANKN-----------LRNKIPIDYFVMDQNAYKFLIQESF 275
            +  +                                    ID+ ++  +         +
Sbjct: 228 MLREHGGPFFDAFRSKHPERTGAYTCFNQKIGAEEYNYGSRIDHILISGSCLHHCDSVEY 287

Query: 276 SEIL---------------------YNEDDIKSRGKRLSDHCPISI 300
             I                            +S     SDH P+ I
Sbjct: 288 HNIFCCHVEECEIMNHFKRGNSENLSKWKGGRSNKLEGSDHIPVYI 333


>gi|194306040|dbj|BAG55474.1| hypothetical protein [uncultured bacterium]
          Length = 329

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 73/282 (25%), Gaps = 64/282 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA----DIVFLQEMGSYNAVA 81
           LVS+NI                              K +D     D++ LQE+   +   
Sbjct: 94  LVSYNIEFG-----------------MRIPQATSEFKIIDPLPQSDVILLQEV-DEHGTN 135

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     +   Y    +  H +           A+  +   +    + L   + +     
Sbjct: 136 RMARVLGYNFVYFPASVHRHGRNF-------GNAILSRWPILNPTKFILP--RRAPGTRQ 186

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R A    + +   ++    +H +           +  S     QQ + + + I      
Sbjct: 187 LRLATRAEIALGSTRLLAYSVHTE---------VYHLTSRKHRRQQVEAIVEDIQ---PG 234

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYF 260
             P ++ GDFN             K ++     I   +          K        D+ 
Sbjct: 235 RQPVIVGGDFNT------VRRAHIKRLEQQFGSIGMARVTRGIGPTIRKYRVQPSAADHI 288

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                             +  E   K      SDH P+ +  
Sbjct: 289 FARG--------------IEVEARGKIPQVLSSDHFPVWVRL 316


>gi|125579119|gb|EAZ20265.1| hypothetical protein OsJ_35869 [Oryza sativa Japonica Group]
          Length = 345

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/301 (9%), Positives = 75/301 (24%), Gaps = 51/301 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NA 79
           +  +++++N+           W +           L    KN + D++  QE+       
Sbjct: 74  KTFKIMTYNV-----------WFHEDLELCRRMDALGDLIKNHNPDLICFQEVTPNIYLL 122

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + K      +    S    +                   K         P   +      
Sbjct: 123 LQKSDWWQEYRCSLSNSMAMQRKYY---------CMQMSKLPVESFDCTPFSNS------ 167

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      V+  G  + ++         +           +    QA      +   +
Sbjct: 168 IMGRELCVAHVKTGG-AVKLVLATSHLESPMPGPPTWDQMYSTERVAQANKSLKILGSFR 226

Query: 200 ESLVPFVIAGDFNRKINYLGNND----DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                 +  GD N      G            I+       +  +  +    + N + + 
Sbjct: 227 N----VIFCGDMNWDDKGDGPFPLPAGWTDAWIELKPGEDGWTYDTKANSMLSANRKLQK 282

Query: 256 PIDYFVMDQ------NAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDY 302
            +D   + +      N  + + + +   + Y ++    +  R        SDH  + +  
Sbjct: 283 RLDR-FVCKLADFKINNIQMIGKNAIPGLSYVKEKKVRKEVRKLELPVLPSDHFGLVLSI 341

Query: 303 D 303
            
Sbjct: 342 T 342


>gi|51598785|ref|YP_072973.1| exodeoxyribonuclease III [Borrelia garinii PBi]
 gi|51573356|gb|AAU07381.1| exodeoxyribonuclease III [Borrelia garinii PBi]
          Length = 255

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 83/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ K    DI+ +QE  +    + +
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVKEYTPDILCVQETKALKEQLPR 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +            
Sbjct: 46  DLILENYYSYFSKSKIKGYSGVCIYSK---------------VKPISVNLLGKEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +           +  +  L +  F +S                 ++++ I       
Sbjct: 91  RGLIA----------YYDNFVLINGYFPNSQALRRR--LVYKLNFLSYVENLIDSLVNGG 138

Query: 203 VPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              VI GDFN                    Y+         ++           K+    
Sbjct: 139 KNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETTWLDSFLNKGYVDTFRIFNKEPGYY 198

Query: 247 ANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              + R +         IDYFV+++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWSYRTRARERNMGWRIDYFVVNEFFKRNVKKSLILDKV-----------MGSDHCPVF 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEL 250


>gi|77555100|gb|ABA97896.1| Endonuclease/Exonuclease/phosphatase family protein, expressed
           [Oryza sativa Japonica Group]
          Length = 498

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/301 (9%), Positives = 75/301 (24%), Gaps = 51/301 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NA 79
           +  +++++N+           W +           L    KN + D++  QE+       
Sbjct: 227 KTFKIMTYNV-----------WFHEDLELCRRMDALGDLIKNHNPDLICFQEVTPNIYLL 275

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + K      +    S    +                   K         P   +      
Sbjct: 276 LQKSDWWQEYRCSLSNSMAMQRKYY---------CMQMSKLPVESFDCTPFSNS------ 320

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      V+  G  + ++         +           +    QA      +   +
Sbjct: 321 IMGRELCVAHVKTGG-AVKLVLATSHLESPMPGPPTWDQMYSTERVAQANKSLKILGSFR 379

Query: 200 ESLVPFVIAGDFNRKINYLGNND----DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                 +  GD N      G            I+       +  +  +    + N + + 
Sbjct: 380 N----VIFCGDMNWDDKGDGPFPLPAGWTDAWIELKPGEDGWTYDTKANSMLSANRKLQK 435

Query: 256 PIDYFVMDQ------NAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDY 302
            +D   + +      N  + + + +   + Y ++    +  R        SDH  + +  
Sbjct: 436 RLDR-FVCKLADFKINNIQMIGKNAIPGLSYVKEKKVRKEVRKLELPVLPSDHFGLVLSI 494

Query: 303 D 303
            
Sbjct: 495 T 495


>gi|224085215|ref|XP_002196659.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 390

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 71/269 (26%), Gaps = 44/269 (16%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
            KR      L+    ++   D+V LQE+ S    + +  K   C  +S            
Sbjct: 23  SKRRQERVRLIGDTLRHEGFDLVLLQEVWSEQDYSDLKVKLAGCYPFS--------HYFR 74

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
           +  I + + V  +   +                      +     +NG    +       
Sbjct: 75  SGVIGSGLCVFSRFPILDT--------------------LLYQYSLNGYPYMLQHGDWFC 114

Query: 167 FCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF- 224
              L +       S       QA  L  +I    ++    ++ GD N     +G      
Sbjct: 115 GKSLHAEYCRDKDSYLPHRLVQAWELAQFIRHTSKAADVVLLGGDLNMHPEDVGIRLLRG 174

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQE 273
           W  +    +     +   + C    +                 IDY +  +    F ++ 
Sbjct: 175 WTGLRDAFAEAAHFEGCKNGCTLIPDNCFAAKSELLPFPLGIRIDYILY-KAISSFTVKC 233

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  E+              SDH  +    
Sbjct: 234 A--ELKTTMGRAPGVDIPFSDHEAVMATL 260


>gi|329768187|ref|ZP_08259690.1| hypothetical protein HMPREF0428_01387 [Gemella haemolysans M341]
 gi|328838034|gb|EGF87655.1| hypothetical protein HMPREF0428_01387 [Gemella haemolysans M341]
          Length = 354

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 94/309 (30%), Gaps = 61/309 (19%)

Query: 29  WNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           WNI               G  +          +   + +  KN  A++ F+QE+   +  
Sbjct: 61  WNIGYAGLDKDEDFFMDGGKMVLPLDKAHVEENLKNITEIVKNEKANVNFIQEIDEDSKR 120

Query: 81  AK-------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +              +     +                  + I+TA   + +N R  Q +
Sbjct: 121 SYNINQVRAFDETLGLNSILAYNFKVRYIPYPLPPLGKVKSGIYTATDFKIENARRFQMA 180

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            P    +   +       +   VE + K + +++ HL ++   +S +            Q
Sbjct: 181 IPFTFPERLANLKRGFSVIYTKVENSDKHLVLINAHLDAYDKGNSGKKA----------Q 230

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRK------------INYLGNNDDFWKTIDPNDSLI 235
            + L ++I  + +     ++  DFN+                L   ++  K++ P    +
Sbjct: 231 MKQLLEFIDYEYKKGNYVLVGADFNQSLKTLTQDEINVVPKELWRAENLDKSLLPVGFKL 290

Query: 236 RFPKEKDS---RCNANKNLR---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            + + K+S                   ID ++   N     +            +  ++ 
Sbjct: 291 VYDESKNSARLNNKPYVKDSEGTYGFIIDGYIASDNIEVLGV------------ETLNQE 338

Query: 290 KRLSDHCPI 298
            R SDH P+
Sbjct: 339 YRYSDHNPV 347


>gi|241668560|ref|ZP_04756138.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254877094|ref|ZP_05249804.1| exodeoxyribonuclease III [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843115|gb|EET21529.1| exodeoxyribonuclease III [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 262

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 94/306 (30%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N N +        W               ++    D D + +QE  +     + 
Sbjct: 2   IKVMTFNANGIRAAARKGFW---------------EWFATQDVDFLCIQETKAQFHQLEK 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++    +Y       +  +D+    ++  A+  K   +       L   D   R    
Sbjct: 47  DEQHFPDGYY-------YDFKDAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRY--- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ + +   +  ++L S    D  +           Q  +  K+ + ++ ES  
Sbjct: 97  ------IQFDYENFSIASLYLPSGSSGDVRQ-------EYKMQFLEKYKEILKEQTESGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
            F++ GDFN     +   +                 +   I  +   +   +  +     
Sbjct: 144 DFIVCGDFNIVHKEVDIKNWKSNYGKTSGVLPEEQAWLDHIFDDLGWVDTFRVINHEPLQ 203

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY +        ++ ES         D   +    SDH P+
Sbjct: 204 YTWWSNRGQARANNVGWRIDYHISTPTLKDKVVPES---------DYVYKENWFSDHAPL 254

Query: 299 SIDYDF 304
           +I YD+
Sbjct: 255 TISYDY 260


>gi|294495018|ref|YP_003541511.1| exodeoxyribonuclease III [Methanohalophilus mahii DSM 5219]
 gi|292666017|gb|ADE35866.1| exodeoxyribonuclease III [Methanohalophilus mahii DSM 5219]
          Length = 244

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/270 (10%), Positives = 71/270 (26%), Gaps = 62/270 (22%)

Query: 59  QYAKNLDADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++  +   DI+ LQE  +        +   + +  ++S      +          + +A+
Sbjct: 11  EWLTSESPDILCLQETKARPSQLPPNIRRIDGYYSYFSAAERKGY----------SGVAL 60

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K      +     G   +      R  +            + +I+  +    D     
Sbjct: 61  YSKVQPQEVR----YGFGINRFDHEGRILIAF-----FDHFVLFNIYFPNGNSSDERLQY 111

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------N 220
                    +  Q L+             V+ GD N     +                  
Sbjct: 112 KMDFYGAFLEYTQELRQ-------EGYSVVVCGDLNTAHKAIDIARPKQNEKRSGFLPVE 164

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQE 273
            +   K +            ++       +L+ +         +DYF +  +  + + + 
Sbjct: 165 REWIDKFLSHGFLDTFRLFNEEEGNYTWWDLKTRARDRNVGWRLDYFFVSADLKQGVKEA 224

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +             SDHCP+ ++ D
Sbjct: 225 FILSEVT-----------GSDHCPVGLELD 243


>gi|242398931|ref|YP_002994355.1| Membrane-bound metal-dependent hydrolase [Thermococcus sibiricus MM
           739]
 gi|242265324|gb|ACS90006.1| Membrane-bound metal-dependent hydrolase [Thermococcus sibiricus MM
           739]
          Length = 575

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 88/302 (29%), Gaps = 61/302 (20%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           +I   V+   F + P       ++ + S+NI+        +   N           L + 
Sbjct: 328 IIASLVVVSAFHVRPVDVETKDEIIVWSYNIHQGFAPYKGAFNGN----------ELVKL 377

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            K    D++  QE+        +           +     + +     +    +A   + 
Sbjct: 378 LKTYSPDVMASQEVVGG----MIGNGYQDVPVLLSAYFGYYYEYSPAVEGTYGVATFSRW 433

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                +   L            R A ++ V  NG    ++++H+  +             
Sbjct: 434 PLEPIEERNLKSLG------QARPAQKVKVLSNG--FVLINVHMGLYP------------ 473

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
               + QA+ L   +    +  V  +I GD N +++               +    FP+ 
Sbjct: 474 -EERALQAEEL---LEMALKDPVAEIILGDTNAELHEKAIEILLM------EYYDAFPER 523

Query: 241 KDSRCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N      N     IDY ++ + +   +            D        +SDH PI
Sbjct: 524 PPYTFN----WGNVDIENIDYIMIKRGSALKVK-----------DYGWLLDVEVSDHRPI 568

Query: 299 SI 300
            I
Sbjct: 569 YI 570


>gi|297154598|gb|ADI04310.1| hypothetical protein SBI_01189 [Streptomyces bingchenggensis BCW-1]
          Length = 293

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 79/314 (25%), Gaps = 72/314 (22%)

Query: 7   LALVFFLVPCTASVAQKV-----------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           + LV    P  A +A+ +           R+++WNI                    S+  
Sbjct: 33  MVLVGPSAPSGAPLARSLPVDAVRGVVPNRVMTWNICN--------------PCEESNVD 78

Query: 56  LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLI----NHSKRDSNND 109
                       ++ LQE  +     +          +++    ++            + 
Sbjct: 79  R-AAEIATYAPQVIGLQEACVRDVERMRDYLEGFYGLVYHVEYGMVLRNWGRCGGAPWSP 137

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
                AV          +            + +R  + +   + G+ + V + HL     
Sbjct: 138 GAFGQAVLSAAPMTNPVNVEYPDGG-----SEDRGYMAVTTSVGGRFVRVFNTHL----- 187

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                       ++ + Q   L   + +   +    ++ GDFN   +        W    
Sbjct: 188 ------AERRQEAVRADQTDVLAADVARHDRA----IVLGDFNAVPD-APELTGMWALAA 236

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
             D            C    + +     DY  +       ++      +           
Sbjct: 237 DTDPQCHPS--STGTCKPTTDWQ--SKFDYIFLRG-----IVPLEHRVLPTP-------- 279

Query: 290 KRLSDHCPISIDYD 303
              SDH  +  D D
Sbjct: 280 --YSDHHLLHTDLD 291


>gi|255084355|ref|XP_002508752.1| predicted protein [Micromonas sp. RCC299]
 gi|226524029|gb|ACO70010.1| predicted protein [Micromonas sp. RCC299]
          Length = 288

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 70/282 (24%), Gaps = 27/282 (9%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                  L +   + DAD+V LQE+   ++          +   Y  +      K     
Sbjct: 3   WPKRGFELTRKIIDADADVVCLQEVDHYHDTFRPALHAQGYDGVYREDEWSPCIKTTDGK 62

Query: 109 -DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR----AVELLV------------- 150
                AI  +++ + +L    P             RR     +                 
Sbjct: 63  LADGVAIFYKREKLELLGMHVPFTPRDVKVPPIEERRDAGKCLVARFRMRAPIEQRRGTG 122

Query: 151 --EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV--PFV 206
             +    K+  +   L      +        + +L + +       ++         P V
Sbjct: 123 WRDYTCAKLDFIVATLHLASEKNEEGVKRREAQALCAMKEILTFKAMSGAGREDRLSPIV 182

Query: 207 IAGDFNRKINYLGN----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +AGD N + +                  +            R    K    K+ IDY   
Sbjct: 183 VAGDLNAQPHEPAVEVFKKLGLMSCYARHIRAEPLFTTWKIRTGPYKPGEAKMTIDYIFA 242

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +A+      +                  SDH  +    +F
Sbjct: 243 QHSAFDVYDVLAMPRSDEIGPKGLPCRGHPSDHLMLKASLEF 284


>gi|302820698|ref|XP_002992015.1| hypothetical protein SELMODRAFT_134604 [Selaginella moellendorffii]
 gi|300140137|gb|EFJ06864.1| hypothetical protein SELMODRAFT_134604 [Selaginella moellendorffii]
          Length = 558

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/358 (11%), Positives = 94/358 (26%), Gaps = 98/358 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VS+N+N L  +   +               LR +  +LDADI+ LQE  +      A
Sbjct: 1   MRIVSYNVNGLRARLSPA-------------RSLRAFLDSLDADIICLQETKIRRQELTA 47

Query: 82  KVFPKNTWCIFYS-----TERLINHSKRDSNND---------------IHTAIAVRKKNV 121
            +     +  F+S      +  + +S   +                    T +    +  
Sbjct: 48  DIATPQGYESFFSCTRTVKKGRLGYSGVATFCKVECGNNVALPVAAEEGFTGLLTSARAG 107

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVE------LLVEINGKKIWVLDIHLKSFCFLDSLEN 175
              ++ +              R+ +         +  +     + +++  +    D+   
Sbjct: 108 EGDKEFWLGSYDPVLTVEGFTRQELLDLDNEGRCIVTDHGHFVLFNVYGPNVGCGDAE-- 165

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI------------NYLGNNDD 223
                  L   Q   L+  +    +     +I GD N               +   +   
Sbjct: 166 --RQDFKLNFYQV--LQCRLESILKQGRRIIIVGDLNISPYPIDSCDPGPEFDTSPSRQW 221

Query: 224 FWKTI-------DPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVM---------D 263
           F   +            +    + +   C +  +          ID+ ++          
Sbjct: 222 FRSLLVSEGGAFSDAFRVFHPERAEAYTCWSQASGAEEFNYGSRIDHVLIAGPCAGHCQS 281

Query: 264 QNAYKFLIQE---------------SFSEILYNEDDIKSRGKRL----SDHCPISIDY 302
            +                        F     +     S G+ L    SDH P+ +  
Sbjct: 282 PDGSHGNSSCDGFAKCGTDMCDILLEFKRAKLDTLPRWSGGRSLKLDGSDHAPVILQL 339


>gi|282861539|ref|ZP_06270603.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
 gi|282563355|gb|EFB68893.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
          Length = 341

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 81/292 (27%), Gaps = 72/292 (24%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L    +     + + + N+N  +     +                 Q     DAD+V L
Sbjct: 115 LLFADKSGAGGDLTVATHNVNAGNPDPAGT----------------AQQVAGSDADVVAL 158

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+      A           +S +  +                        L   YPL 
Sbjct: 159 QELPDGKVAAYENALAGRYPHHSVQGTVG-----------------------LWSKYPLT 195

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQW 190
            ++    + G  RA+   V      + V   HL S    LD+         S     A  
Sbjct: 196 DSRPVDIKLGWTRAMRATVATPEGPVSVFVAHLPSVRVKLDAGFTASQRDRS-----ADA 250

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L + I    E +   V+ GD N  +N         ++++   + +R  +           
Sbjct: 251 LGEAIAD--EPIERVVLLGDLNGTMND--------RSLNAVTAQMRSTQGAAGDGFGFSW 300

Query: 251 LR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                   ID  ++       +   S   +   +          SDH PI+ 
Sbjct: 301 PAAFPMARIDQIMVRG-----VEPLSSWTLPATD----------SDHLPIAA 337


>gi|114608807|ref|XP_001151885.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral membrane
           (neutral sphingomyelinase) isoform 2 [Pan troglodytes]
 gi|114608809|ref|XP_001152001.1| PREDICTED: sphingomyelin phosphodiesterase 2 isoform 3 [Pan
           troglodytes]
          Length = 423

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 70/291 (24%), Gaps = 41/291 (14%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           I  L+      L K+   R       L  +      D+  L+E+ S      +  K +  
Sbjct: 11  IFNLNCWGIPYLSKHRANR----MRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLS-- 64

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRA 145
                      +    +  I + + V  K+       +                   +  
Sbjct: 65  ------PTYPAAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAV 118

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
             L++ ++G  +     HL +               +    QA  L  +I    +     
Sbjct: 119 GLLVLHLSGMVLNAYVTHLHA-----EYNRRKDIYLAHRVAQAWELAQFIHHTSKKADVV 173

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--------------NL 251
           ++ GD N             K            ++       N                 
Sbjct: 174 LLCGDLNMHP--EDLGCCLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQELKPF 231

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + IDY +  +    F I      +          G  LSDH  +    
Sbjct: 232 PFGVRIDYVLY-KAVSGFYISC--KSLETTTGFDPHSGTPLSDHEALMATL 279


>gi|297625750|ref|YP_003687513.1| exodeoxyribonuclease III/exonuclease III [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921515|emb|CBL56069.1| Exodeoxyribonuclease III/exonuclease III [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 313

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 85/343 (24%), Gaps = 95/343 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL ++N+N +   +    +    +R                 D+  LQE+       + 
Sbjct: 2   LRLATYNVNGIRAAQR-RGFTGWKQRCL--------------PDVACLQEVRCP---YEA 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----- 138
            P   +  F+                    +AV  +      + +       S +     
Sbjct: 44  LPMEAFAGFHVA-------YDAGELKGRNGVAVLSRTPFDAVRVWSDQAMFISPAGDARM 96

Query: 139 -----------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-------- 173
                            R+ N     + V++  + + V  +++     L +         
Sbjct: 97  AGADELSVPDYPLARPLRSFNHEGRYVEVDLADQPLTVACVYVPKGDSLLAPGIRSRDPL 156

Query: 174 --------ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-------- 217
                   +  Y    + L+  ++ L         +   F++ GDFN             
Sbjct: 157 TDEQLAGVQRRYDRKMAFLAGFSRHLTRARRAAHAAGREFLVVGDFNIAHTRLDVKNWRP 216

Query: 218 --------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYF 260
                           + + P   +         +                     IDY 
Sbjct: 217 AQKASGFLPEERAWLSEQLSPRTLVDVVRAAHPDQDGPYSWWSWMGQAFARDTGWRIDYH 276

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +      +              D      +R+SDH  + +DYD
Sbjct: 277 LASPQLARRSA-------RAFVDRDHGADERVSDHAAVVVDYD 312


>gi|171695106|ref|XP_001912477.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947795|emb|CAP59958.1| unnamed protein product [Podospora anserina S mat+]
          Length = 539

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/343 (12%), Positives = 77/343 (22%), Gaps = 74/343 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++ +V+ N   L       + K   +R T     L     +    IV LQE  +    
Sbjct: 7   PTELNIVTLNCWGL-----KFISKLRNERLTEIGRQLA--IADPSPHIVCLQECFTQEDY 59

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFS 138
             +  +  + + Y                    +A+  K          YPL G   +F 
Sbjct: 60  KAIRRETRFILPYGKFYFSGPFGG--------GLAILSKWPIEESTLFRYPLNGRPTAFW 111

Query: 139 RAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           R      +      +        V+++                   +    Q+  +   +
Sbjct: 112 RGDWYVGKGVACAKIRYGPAAKQVIEVFCTHTHSPYEAGQPDDSYLAQRLAQSWEISKLL 171

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCN- 246
               E     +  GDFN     L +          D W+ + P+ SL       +     
Sbjct: 172 RGAAERGHLVLGCGDFNMIPMSLEHQLVTANTPVRDVWRVLHPDSSLGPADHPAEKARRR 231

Query: 247 ------------------ANKNLRN-------------------------KIPIDYFVMD 263
                                  R                             +DY    
Sbjct: 232 PIPTAGFNIEENGAASDGPYCTWRWTKEQQKLLGPGKPPVTVPPDTIDRRGKRLDYIFAG 291

Query: 264 QNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDYDF 304
                 L      +             G  LSDH  +     F
Sbjct: 292 SGDIASLNGGWVVKAARVGMMMRHPELGCSLSDHFAVEATLAF 334


>gi|170591843|ref|XP_001900679.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
 gi|158591831|gb|EDP30434.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
          Length = 622

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/347 (10%), Positives = 90/347 (25%), Gaps = 63/347 (18%)

Query: 19  SVAQKVRLVSWNIN---TLS-----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           + +  +R++S+N+     L      E           +     Y +L +      ADI+F
Sbjct: 273 ANSGNIRVISYNVLANLYLDLKLRQEDLHFPYCAKEYQNYDYRYPILLREIPGYQADIIF 332

Query: 71  LQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQ 125
           LQE+     +     V   + +  ++  + +  +              +      +  L 
Sbjct: 333 LQEVDERFWLRFLPDVMSSHGYDCYFKKKGMKVNEGLVVCFRRKQFRCLESHNMWLPDLL 392

Query: 126 QSYPLLGAKDS----------FSRAGNRRAVELLVEINGKKI------WVLDIHLKSFCF 169
            +       D            +   ++ AV  ++ ++   +       +L  +   +  
Sbjct: 393 NTGTYPENTDIIRLLKSNDELNAMFVSKPAVIQVLVLDSSSLFAKESGILLLANTHLYFD 452

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------ 223
                     +        +   ++  +  ++ +  + AGDFN   +    +        
Sbjct: 453 PRFEIIKILQALLCARWIVRVATNYANRNPKAKLHILFAGDFNSTPDGAVYHLLSTGNIS 512

Query: 224 ----------------------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                                       F   +       +F           +    + 
Sbjct: 513 VKSDCLAYSQYPKIYGDVNFTIQPSFPSFNLNLINLGDETQFTNYTRHYRYNGQIAGFEG 572

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +DY     N     +     + L  +          SDH P+  D 
Sbjct: 573 CLDYIWGSANVKIQKVIPVPPKELAKKYVALPSKISPSDHLPLVCDI 619


>gi|307702031|ref|ZP_07639039.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           mitis NCTC 12261]
 gi|307616676|gb|EFN95865.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           mitis NCTC 12261]
          Length = 271

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 78/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + LL +   + D D++  QE+       +V   + +    +                
Sbjct: 17  EEKFQLLLEDILDKDYDLICFQEINQEITSLEVEVNDFYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++G ++ V  +HL  +      E     +        + L            P ++A
Sbjct: 135 ETVVDGNELAVASVHLSWWDKGFQEEWARIEAV------LKELNK----------PLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|242215539|ref|XP_002473584.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727304|gb|EED81227.1| predicted protein [Postia placenta Mad-698-R]
          Length = 475

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 71/288 (24%), Gaps = 56/288 (19%)

Query: 60  YAKNLDADIVFLQEMGSYNA---VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
               L ADI+  QEM S  A        P      F        +S      D   A  +
Sbjct: 10  ILYALGADIICFQEMKSSRATLPRDVALPGPYHGFFSFPVNKGGYSGVAVYADSRKATPL 69

Query: 117 R--------------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
           R                    +  SYPL    D F               +  +  V+D 
Sbjct: 70  RAEEGLTGVLQPKPPMSPEERVSMSYPLAHDFDPFPDDNGETDSGFDALDSEGRTLVVDF 129

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKIN----- 216
            L     +     T              L++ I +  ++     ++ GD N         
Sbjct: 130 GLFVLINVYCPAETSDARLPFKMNFHLLLQERIRKLIEKEHREVIVVGDINIAATPLDHA 189

Query: 217 ------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL----------RNK 254
                            + F   +DPN  ++   +                         
Sbjct: 190 EGNLPSSIATFWDHPAREWFRNWLDPNGPMVDVIRMFWPERKGLYTCWNMKLQARETNYG 249

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             IDY ++ +    ++                    + SDHCPI ID 
Sbjct: 250 ARIDYVLVTKGLLPWIKHGDIQ-----------ASLKGSDHCPIYIDL 286


>gi|171464285|ref|YP_001798398.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193823|gb|ACB44784.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 260

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 77/302 (25%), Gaps = 66/302 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +R++S N+N +           +V++                AD + +QE+     +   
Sbjct: 2   LRIISANLNGIRSAIKKGFLPWAVQQ---------------KADFICMQELKAQRDDLED 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +    F+       +S                           L G  ++   A 
Sbjct: 47  TILNPDGMHGFFHHAEKKGYSGCGIYAPYKP--------------DEVLYGYGNAEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE   K + V+ +++ S       +                LK    +    
Sbjct: 93  GRY-----VEARFKGLSVISVYMPSGSSSPERQEAKYRYLDSFLPHLVALKKLGREIVLC 147

Query: 202 LVPFV---------IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNL 251
               +           G+                       +  + + +           
Sbjct: 148 GDVNIAHQEIDLKNWKGNLKNSGFLPEERAWLTNLFSKVGYVDVYRQLEPKATETCYTWW 207

Query: 252 RNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N+           IDY +      +   + +             + ++ SDH P+++DY
Sbjct: 208 SNRGQAYAKNVGWRIDYHISTPGIAQTAKKATV-----------YKDEKFSDHAPLTVDY 256

Query: 303 DF 304
           D+
Sbjct: 257 DW 258


>gi|291224336|ref|XP_002732161.1| PREDICTED: TRAF and TNF receptor associated protein-like
           [Saccoglossus kowalevskii]
          Length = 350

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 84/286 (29%), Gaps = 48/286 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L++WNI+ L  +             T     +    K    D+V+LQE+         
Sbjct: 103 LKLLTWNIDGLDNKN-----------ITERTKTVCSIIKRESPDVVYLQEVIVET----- 146

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    +       +   ++    T I +RK  + +L                  R
Sbjct: 147 -----FAYIETMCSPTYIAIPANSEQYFTTILLRKSRISLLAHKIIEFPTT-----KMYR 196

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +        + ++  H++S                    Q   +   +++  ++  
Sbjct: 197 NLLTVKARFRDIDLLLMTSHMESM----------KNHSHERKTQLTTVLKHMSE-ADAAT 245

Query: 204 PFVIAGDFNRK-------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             +  GD N +            +  D W+     +          +  N +   + K  
Sbjct: 246 AVIFGGDTNLRDYEITQIGGLPDSIGDVWQMCGSPEDAQFSWDITKND-NLDMPFKPKCR 304

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            D   + Q     L+ + F    +   +    G+  SDH  I  ++
Sbjct: 305 FDRLFLRQGCSSKLLPQMFM---FVGTERLPCGRFASDHWGILCEF 347


>gi|307728165|ref|YP_003905389.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
 gi|307582700|gb|ADN56098.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
          Length = 259

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/304 (10%), Positives = 77/304 (25%), Gaps = 75/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +    +AD++ +QE+         
Sbjct: 2   LRVITANLNGIRSAAKKGFF---------------DWFGEQNADVLCVQEIKCSQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +      + +         A    +     +      +G          R
Sbjct: 43  ---DMTPEFMAPHDFTGYFQHAVKKGYSGAGVYTRHEPDEVV-----IGFGSEEFDPEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE+   K+ ++ +++ S    +  +                L            
Sbjct: 95  Y-----VELRFGKLSIVSVYVPSGSSGEERQQAKYRFMDEFMPHLAGLAR--------ER 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N     +   +                +   +      +   +  D R    
Sbjct: 142 EVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          +               R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATPGIAGKAKRTEV-----------FRDIKFSDHAPLT 250

Query: 300 IDYD 303
           +DYD
Sbjct: 251 VDYD 254


>gi|255513574|gb|EET89840.1| exodeoxyribonuclease III Xth [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 249

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 69/303 (22%), Gaps = 82/303 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           + L+SWN+N                   +    +    ++   DI+  QE+     ++ K
Sbjct: 3   ISLISWNVNG----------------IRAAEKSVVGLLESEKPDIIAFQEIKAGEESIPK 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 + ++ ++     +S       I                    +     F     
Sbjct: 47  GLKSLGYAMYVNSAARKGYSGTMVMTKIK------------------PISYSTEFEDDEG 88

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R        +     + ++ +  +     S             +    L+          
Sbjct: 89  RVQ-----RLEFDDYYFVNAYFPNSRRDLSRLEFKIKFDRDFEKYIGRLEA--------K 135

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++ GDFN                         ++         L  F        + 
Sbjct: 136 KPVLVCGDFNVAHKDIDIARPAENRGNAGFTDEEREWMTEFLGGGRLDTFRIFNKGAEHY 195

Query: 248 NKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDYFV  +     ++                   R SDH PI 
Sbjct: 196 TWWAYFSHARDRNIGWRIDYFVASKQMRSRIVNAGIL-----------SEIRGSDHAPIY 244

Query: 300 IDY 302
           +  
Sbjct: 245 VTL 247


>gi|62085822|gb|AAX63302.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFGGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085788|gb|AAX63285.1| DNA lyase [Beauveria bassiana]
 gi|62085830|gb|AAX63306.1| DNA lyase [Beauveria bassiana]
 gi|62085840|gb|AAX63311.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFGGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085808|gb|AAX63295.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFGGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|51473856|ref|YP_067613.1| exonuclease III [Rickettsia typhi str. Wilmington]
 gi|51460168|gb|AAU04131.1| E.coli exonuclease III [Rickettsia typhi str. Wilmington]
          Length = 270

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 69/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +   LLR +    + DI+ LQE+         
Sbjct: 1   MKIATWNIN----------------SIKTRLNLLRNFLSKENLDILLLQEIKCETE---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     + +         +  +A+  K          +   ++++     R
Sbjct: 41  ------KFPFDELSDLPYHFYVHGQKSYNGVAIISKFP----ADKIIKDFQNNYCSDQAR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ + ++     ++ ++  +  F+ S             +      ++++ KK    
Sbjct: 91  F-IEIKLSLSIGYSNIISLYAPNGSFVSS------NKFVEKLKFYDNFINYLSTKKSCYE 143

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN     +                      +TI  +     + +         
Sbjct: 144 KTIIGGDFNIAPFDIDVYSSKVLTETTCCTKVEQKKLRTILNSGFEDLY-RLMHPNKQEF 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + ID  +   N   +L +          D      K+ SDH PI 
Sbjct: 203 SWWDYRAGCFEKNKGMRIDMILGCNNTIDYLEKCYM-------DYNFRTQKKPSDHIPII 255

Query: 300 IDY 302
            ++
Sbjct: 256 ANF 258


>gi|21233269|ref|NP_639186.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770227|ref|YP_244989.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115105|gb|AAM43077.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575559|gb|AAY50969.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 266

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 85/313 (27%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +               ++    DAD++ +QE  +       
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------EWFATQDADVLCIQETKAQE----- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +         +  S    ++ +A+  K      ++       D   R    
Sbjct: 41  --HQLAGPEFLPAGYKAWFRDASTKKGYSGVAIYAKREPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  +           Q  +WL+  +++   S  
Sbjct: 96  ------IEARFGNLSVVSFYIPSGSSGELRQGYK-------FQVMEWLRPILSEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDS-----------LIRFPKEKDSRCNA----- 247
            +V+ GD+N   + L   +      +                    +   S         
Sbjct: 143 QYVLCGDWNIVRSALDIKNWKSNQKNSGCLPPERDWLNGLCADLLDEADASNGRGWVDSY 202

Query: 248 ---------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       +   S             R 
Sbjct: 203 RVLHPQGEDYTWWSNRGAARANNVGWRIDYQLVTPGLRDKVQACSI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 QRFSDHAPYIVDY 264


>gi|313886230|ref|ZP_07819959.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312924301|gb|EFR35081.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 390

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 60/297 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS N N     E  +  ++              Y    DADI+ LQE    +  +K 
Sbjct: 129 IKVVSLNANAFQFAELGAHDQHPA----------TDYLAESDADIICLQEAWLSDNDSKY 178

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             + +  + ++ +    +S   +  D  + + V  K   +  +   L    +        
Sbjct: 179 MSERS--LHHTMQAYPYYSSAYAVKDHGSRLIVLSKYPILSTRPIDLHSKFN-------- 228

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------------------NTYSPSCSL 183
                 + +  KK+ + ++HL+SF F    +                      +SP    
Sbjct: 229 GGAVFTILVGEKKLVLYNLHLESFGFTKEEQKLYFQLAQEGNPKGFTQAVGGRFSPPFVR 288

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            ++Q + +   +  ++      +I GDFN       ++      +            +  
Sbjct: 289 RAKQVEQIYQDVNYQESP--YVLICGDFNDTPISYTHHR-----LSTGLHDAIATTGRGV 341

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +        + ID+ +   +                      R   +SDH PI  
Sbjct: 342 NYSYYFKSLIGVRIDHMLYSDHIEARAA-------------YVDRTAEISDHKPIIC 385


>gi|299756331|ref|XP_001829256.2| inositol phosphorylsphingolipid-phospholipase C [Coprinopsis
           cinerea okayama7#130]
 gi|298411628|gb|EAU92582.2| inositol phosphorylsphingolipid-phospholipase C [Coprinopsis
           cinerea okayama7#130]
          Length = 434

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/281 (11%), Positives = 71/281 (25%), Gaps = 34/281 (12%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                 +      L+ DI+ LQE+  ++   KV  + +  + ++                
Sbjct: 30  EERIEAIAHELSTLNHDIIALQEIWVHSDYQKVQERVSKRLPHAKFFYSGALGAGLAIFT 89

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              I         L  +   + A D F       A  +++     ++ V + HL +    
Sbjct: 90  RYPIISTSVVPYSLNGAPIDVAAGDWFVGKA--AASVVILHPILGQVQVFNTHLFAKGGE 147

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTID 229
           D  E       +     A        Q  E     +  GDFN     L  +      ++ 
Sbjct: 148 DGPEFLR----AHRLVGAWEFAKLARQAAEVGRYVIALGDFNSIPPTLPMSIILNHASLT 203

Query: 230 PNDSLIRF--------------------PKEKDSRCNAN--KNLRNKIPIDYFVMDQNAY 267
              +                          +      +   +       +DY +  Q   
Sbjct: 204 DAWTATHPGYESGPVPKTALEAVERHGITADSPLNTWSAGKRPHGWGKRLDYCLYRQPVR 263

Query: 268 KFLIQESFSEILYN-----EDDIKSRGKRLSDHCPISIDYD 303
               +   +    +      + +       SDH  +    +
Sbjct: 264 HASDKPVPNLRATDCKVVFTEHVPGYTFSFSDHFGLEATLE 304


>gi|187779732|ref|ZP_02996205.1| hypothetical protein CLOSPO_03328 [Clostridium sporogenes ATCC
           15579]
 gi|187773357|gb|EDU37159.1| hypothetical protein CLOSPO_03328 [Clostridium sporogenes ATCC
           15579]
          Length = 263

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 86/298 (28%), Gaps = 54/298 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTT-SDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++ N              +  ++        L +     + D++ LQE+        
Sbjct: 1   MKVLTLN------------CHSWQEKKQIEKIRYLAKVIYENNYDVIALQEVSQSINSKI 48

Query: 83  VFPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +F       F             +  +++        +     +A+  K     + S+ +
Sbjct: 49  LFDNIKEDNFALILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKYPIKEKDSFYI 108

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             +KD       R+ ++  +  N   I +   HL    + D  E+           Q   
Sbjct: 109 SKSKDRNFWK-TRKIIKCKIYYNNHLISLYSCHL--GWWDDEEED--------FKFQVNK 157

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRC 245
           L   +          ++ GDFN          D+      K I                 
Sbjct: 158 LVQDLK----EEETCILMGDFNNDAFLRYEGYDYVIDKNLKDIYDLGKSKDNGVTVIGNI 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  ++ R  + ID  + ++N      +  F+ I             +SDH  +    +
Sbjct: 214 DGWESNRKNMRIDLILSNKNLDIEYCRVIFNGINKEI---------ISDHFGVEAKIE 262


>gi|83816030|ref|YP_446067.1| endonuclease/exonuclease/phosphatase family protein [Salinibacter
           ruber DSM 13855]
 gi|83757424|gb|ABC45537.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber DSM
           13855]
          Length = 484

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/317 (10%), Positives = 74/317 (23%), Gaps = 53/317 (16%)

Query: 18  ASVAQKVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           A  A  +R++S+N +N    ++    ++              +     +  ++  QE+  
Sbjct: 188 APTASALRMLSYNSVNDFDREQSAIFFETRQPSFR-------RIFDATNPGVIAFQEVYD 240

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A       +                          + +  +   +   + P      S
Sbjct: 241 QTADQVAAVADEALGLPDEWDWA---------KQGQDLVLGSRYPILDTHTIPGYENNVS 291

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            +       ++    +    + V           D  E + +     +          + 
Sbjct: 292 GA-----FLLDADDALGTDLLVVNMHPPCCNYGPDDGEPSRNAQRQRVVDGVVAFLREVK 346

Query: 197 Q-----KKESLVPFVIAGDFNRKINYLGNN-------------------DDFWKTIDPND 232
           Q           P V+ GD N   +                        D     +    
Sbjct: 347 QGDGPFDVPPKTPIVVLGDMNFVGDAQQPRTLRTGEIVHTDRYGPPAAPDWDGSPLLDTR 406

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                     +      +      +DY  +  +  + + +          D   + G R 
Sbjct: 407 PRQVASPLHTTWIAPGSSF-PPGRLDYAFVTDSVLEVVHEFVLHTPALPADVRSAHGLRA 465

Query: 293 ------SDHCPISIDYD 303
                 SDH P+ ID  
Sbjct: 466 DDTPTASDHLPVVIDVT 482


>gi|307308870|ref|ZP_07588558.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
 gi|306900675|gb|EFN31287.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
          Length = 257

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 79/300 (26%), Gaps = 70/300 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ ++NIN ++                    +L  +    + D+V LQE+ + +     
Sbjct: 1   MKIATFNINGVN----------------KRLDILLTWLGTAEPDVVCLQELKATDG---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +      +            +A+  ++   +     L G     S   +R
Sbjct: 41  ------QFPRAAIEAAGYGAVWRGQAAWNGVAILARDREPVLTRTGLPGDS---SDTQSR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       I +  ++  +       +  Y  +  L   Q            E+ V
Sbjct: 92  YIEAAV-----NGILIASLYAPNGNPQPGPKFDYKLAWHLRFNQHAA------ALLETGV 140

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSR--CN 246
           P V+AGD+N                           ++++     L    K         
Sbjct: 141 PVVLAGDYNIVPEPRDIYPTRSYDDNALVQPESRAAFRSLVDQGWLDALRKIHPKEQLFT 200

Query: 247 ANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                RN+        +D+            +          D      +  SDH P+ +
Sbjct: 201 FWDYRRNRWQRDAGLRLDHI-------LLSRKLRRRLTGAGIDREIRALEGSSDHAPVWV 253


>gi|115844794|ref|XP_789515.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115945899|ref|XP_001187208.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 302

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 72/305 (23%), Gaps = 79/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +++ +WN+       G+  W                Y      DI F QE          
Sbjct: 49  LKISAWNV------GGMKAWIKKGG---------IDYLTKESPDIFFAQETKIDATKPPP 93

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               + + I          +   +    ++ +A+  K   +       +   D   R   
Sbjct: 94  EADLDDYHI----------TYNAAEKKGYSGVALFSKKEPLSVTKGMGIEEHDKEGRL-- 141

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +       + + +++ +        +             + L        ++ 
Sbjct: 142 -------ITAEYDSFYFVGVYVPNSSRKLVRLDYRQEWDKDFHAYLKKL--------DAK 186

Query: 203 VPFVIAGDFNR----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            P +  GD N                    +     + + ++     +  F        +
Sbjct: 187 KPVICCGDMNVAHEEIDLKNPKSNRNKTPGFTDQEREGFTSLLDMGFVDSFRHLYPEEAD 246

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A                  +DY V+ +     L         +            SDHCP
Sbjct: 247 AYSFWTYMGNCRAKNVGWRLDYGVISKALVPKLCDNQMRLQTF-----------GSDHCP 295

Query: 298 ISIDY 302
           + +  
Sbjct: 296 MVVSL 300


>gi|194467701|ref|ZP_03073688.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri 100-23]
 gi|194454737|gb|EDX43634.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri 100-23]
          Length = 275

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 74/305 (24%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++++     +  +    R       + Q    +  D++ +QE          
Sbjct: 1   MKFISWNIDSINAALTGTSVRAGETR------EVLQKIAAMKPDVIAIQETKLSKNGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +    +   S  +     +             + +YP + A +     G  
Sbjct: 55  KHLTVLQELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKITYPKINAPEPMDDEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +V +++  +        +               L            
Sbjct: 114 ---IITLEFPD--FYVTEVYTPNSGNGLKRLDERQTWDDCYRDYLHELDQ--------QK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F           
Sbjct: 161 PVIASGDFNVAHEEIDLAHPATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +                DH PI
Sbjct: 221 SWWAQRVITSKQNNSGWRIDYWLVSDRLADKITEAGMIDSGERR-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 ILEID 274


>gi|62085794|gb|AAX63288.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 71/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     + +R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQSRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDNDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|32472155|ref|NP_865149.1| deoxyribonuclease gamma [precursor] [Rhodopirellula baltica SH 1]
 gi|32397527|emb|CAD72833.1| deoxyribonuclease gamma [precursor] [Rhodopirellula baltica SH 1]
          Length = 341

 Score = 69.2 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/286 (10%), Positives = 81/286 (28%), Gaps = 30/286 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80
            +R+ ++NI    +       K+           +         D+V +QE+    A+  
Sbjct: 72  SIRIATFNIQVFGKS------KSEKPDVMRQLAQVCLLF-----DVVAIQEIKGDPALPM 120

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +  +           +     R S  + +  +    +   + +  Y +    D   RA
Sbjct: 121 NGLLDEIASLGGRYDATVSAPQGRTSQTERYGYVWDTDRIDLIPESDYLVNDDLDRMHRA 180

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               + +  V     +       L +    D + +    + +        +   +   + 
Sbjct: 181 PMVASFQTRVTPTATRKPFRFTLLNAHTDPDEVGSRIGDTPANEMNVLDDVFHSVRMYEY 240

Query: 201 SL---VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                  F++ GD N    +          ++            D   N  +        
Sbjct: 241 QNTGEEDFILMGDLNVDTQW---------LLETGRIPNVTSLVGDKPTNTLQTKTY---- 287

Query: 258 DYFVMDQNAYKFLIQ-ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+ ++D    +         ++       + +  ++SDH P+  ++
Sbjct: 288 DHILIDAATTREFTGRAGVLDLKAALRITEEQALKVSDHMPVWAEF 333


>gi|62085846|gb|AAX63314.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085834|gb|AAX63308.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDNDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085838|gb|AAX63310.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085780|gb|AAX63281.1| DNA lyase [Beauveria sp. ARSEF 32]
          Length = 579

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMSEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|62085802|gb|AAX63292.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|17367396|sp|Q9ET55|NOCT_RAT RecName: Full=Nocturnin; AltName: Full=CCR4 protein homolog
 gi|9885290|gb|AAG01390.1|AF199495_1 nocturnin [Rattus norvegicus]
          Length = 253

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 74/207 (35%), Gaps = 20/207 (9%)

Query: 16  CTASVAQKVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           C++S    +R++ WNI    L E ++          +      L+ +       DI+ LQ
Sbjct: 60  CSSSHP-PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQ 118

Query: 73  EMGSY-NAVAKVFPKNTWCIFYSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           E+  Y + +  +  +  +   +  +        + ++  D      ++ +   +   +  
Sbjct: 119 EVDHYFDTLQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQSRFKLINSTNIR 178

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L       ++     A  L  + +G++  +   HLK+           +      S Q  
Sbjct: 179 LTAMTLKTNQVA--IAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGC 226

Query: 190 WLKDWI-TQKKESLVPFVIAGDFNRKI 215
            L   +    + + +P ++ GDFN + 
Sbjct: 227 DLLQSLQNITEGAKIPLIVCGDFNAEP 253


>gi|303256316|ref|ZP_07342332.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47]
 gi|302861045|gb|EFL84120.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47]
          Length = 262

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 71/268 (26%), Gaps = 58/268 (21%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           +    DADIV +QE+ +               +             +    ++  A+  +
Sbjct: 27  WLAKQDADIVCIQELKAQPDEVPDEINLDGAFY--------RYVHCAEKKGYSGCAILTR 78

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                     ++G  +       R      VE     + V+ I+  S    +  +     
Sbjct: 79  KKPDEV----IIGFGNEEFDREGRY-----VEARFNNLIVVSIYFPSGSSSEERQ----- 124

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-------- 231
                 +    +K  + +        V+ GDFN     +   +      +          
Sbjct: 125 --QAKFRFLDVIKGRLDELLRDGRDVVLCGDFNIAHKEIDIKNWKGNLKNSGFLPEERQW 182

Query: 232 ------DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFS 276
                 +      +  D R +      N+           IDY                 
Sbjct: 183 ITDRLREGWQDVFRRLDPRPDRFTWWSNRGRARINNVGWRIDYQFSTPAIASTAK----- 237

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +    R +R SDH P+++ YDF
Sbjct: 238 ------ETDIYRDERFSDHAPLTVVYDF 259


>gi|297798308|ref|XP_002867038.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297312874|gb|EFH43297.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 616

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/345 (11%), Positives = 86/345 (24%), Gaps = 78/345 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++V++N+N L              +  S +  L +   + DADI+  QE  +      A
Sbjct: 1   MKIVTYNVNGLR-------------QRVSQFESLLKLLDSFDADIICFQETKLRRQELTA 47

Query: 82  KVFPKNTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKK---NVRVLQQSYPLLGAKD 135
            +   + +  F+S   T                   A            ++    L   +
Sbjct: 48  DLAIADGYESFFSCTRTCEKGRTGYSGVATFCRVKSASSSCEIALPVAAEEGITGLVNSN 107

Query: 136 SFSRAGNRRAVEL-----------LVEINGKKIWVLDIHLK-SFCFLDSLENTYSPSCSL 183
           S        AV              ++  G+ +     H      +        +     
Sbjct: 108 SRGGKNEMSAVGEGLEEYEKEELLRIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEF 167

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTI--- 228
             +    L+              + GD N     +                 F   +   
Sbjct: 168 KHRFYDILERRWECLLRQGRKVFVVGDLNIAPFAVDRCEAGPDFEKNEFRKWFRSLLVER 227

Query: 229 ----DPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQN-------------AY 267
                         ++    C ++            ID+ ++  +               
Sbjct: 228 GGSFSDVFRSKHPERKDAFTCWSSSTGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLA 287

Query: 268 KFLIQESF--SEILYNEDDIKSRGK-------RLSDHCPISIDYD 303
             + +         +  +++ +R K       + SDH P+   +D
Sbjct: 288 CHINECEILTEYKRFKNENMATRWKGGLGTKLKGSDHVPVFTSFD 332


>gi|315503641|ref|YP_004082528.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|315410260|gb|ADU08377.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 1089

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/375 (9%), Positives = 80/375 (21%), Gaps = 103/375 (27%)

Query: 26  LVSWNINTLSEQEGVSLW--------------------KNSVKRTTSDYTLLRQYAKN-- 63
           + ++N+  L +                             S +   +   +  +      
Sbjct: 607 IATYNVENLYDYRDDPFDGCDFAGNTGCPGVSPPFDYVPASPEAYAAKLAVQARQIVQSL 666

Query: 64  LDADIVFLQEMGSYNAV--------------AKVFPKNTWCIFYSTERLINHSKRDSN-- 107
              D++ +QE    +                A   P     +  +       +   +   
Sbjct: 667 HSPDLILVQEAEDQDICSVVDGALACGDTNNADGAPDTVQELALAIAANGGPAYAAAYDR 726

Query: 108 -----NDIHTAIAVRKKN----------------VRVLQQSYPLLGAKDSFSRAG----- 141
                  I +A   R                     V  +S  L    D  +        
Sbjct: 727 TGADARGIASAFLYRTDRLTLAEATAADPLLGSAPTVQYRSAALPSNADVQNPKALNAVL 786

Query: 142 ----------------NRRAVELLVEINGKK-----IWVLDIHLKSFCFLDSLENTYSPS 180
                            R A      +           +  +        DS        
Sbjct: 787 PADVDRSTGVDGSNVYTRAAQVARFTVKAGPGSTERFTLWAVANHFSSGPDSRVGQRREQ 846

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWKTIDP- 230
            +  +   Q ++       +     V  GD N                 +D      +  
Sbjct: 847 AAYGAAIVQAVEA-----SDPNARVVYGGDLNVFPRPDDPIATAQNPTPSDQLAPLYEAG 901

Query: 231 -NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL--YNEDDIKS 287
            ++      K+  +   +         +D   ++   +  L+Q   + I   Y  D  + 
Sbjct: 902 LHNLWDDLVKDAPASAYSYTFSGQAQTLDNLFVNDPMHDDLVQVRTAHINADYPTDAPEL 961

Query: 288 RGKRLSDHCPISIDY 302
             +  SDH P    +
Sbjct: 962 GERGASDHDPQVARF 976


>gi|218283512|ref|ZP_03489502.1| hypothetical protein EUBIFOR_02092 [Eubacterium biforme DSM 3989]
 gi|218215780|gb|EEC89318.1| hypothetical protein EUBIFOR_02092 [Eubacterium biforme DSM 3989]
          Length = 249

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 82/305 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++L+SWN+N +                             LDAD V +QE       +  
Sbjct: 1   MKLISWNVNGIRAVMKKGF---------------TDVLDELDADFVCIQETKAHPEQIES 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +    S +R             ++   V  K   +  +    +   D   R   
Sbjct: 46  YTDNYPYQYINSAKR-----------KGYSGTMVLCKKKPLSIKYGINVPEFDDEGRI-- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  + +   + +++ ++  +        +             + L           
Sbjct: 93  -------ITLEYPEFYLVTVYTPTSGDGLMRLDYRLEWDEAFGNYLKSL----------D 135

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P +  GDFN   N                     D +K    ++ +  + +  +     
Sbjct: 136 KPVMACGDFNVANNEIDVPYPDMIRGTAGFSDEERDSFKENLLSNLVDTY-RVLNPETIQ 194

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +         + +DY+++  +    ++     + +Y            SDHCPI
Sbjct: 195 YSWWSYRGQARENNIGMRLDYWLVSNDLKDKIVDSKILDDIY-----------GSDHCPI 243

Query: 299 SIDYD 303
            +D +
Sbjct: 244 MLDIN 248


>gi|171910991|ref|ZP_02926461.1| Endonuclease/exonuclease/phosphatase [Verrucomicrobium spinosum DSM
           4136]
          Length = 380

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/277 (10%), Positives = 67/277 (24%), Gaps = 54/277 (19%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F     +   A  ++++++N                  R  S  T L+ +      D++ 
Sbjct: 109 FSFGTSSPQGAHTLKVMTYN------------------RGQSQGTSLQPFKNRNQPDLLA 150

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQ   S          + +  F                       +  K   +  Q    
Sbjct: 151 LQ--DSGGRAQAYLEADGYKEFSHGASSGE-------------FLLLSKFPILNTQPIVF 195

Query: 131 LGAKDSFSR-AGNRRAVELLVEINGKKIWVLDIHLK------------------SFCFLD 171
               +   +   +       ++  G ++ V ++H                          
Sbjct: 196 THQPNKQGQIQRSELGARFEIDWAGTRVAVYNMHFPTHRGMLQSERNGGFLSGVLGIPGT 255

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
            L        +      + ++       +  +P ++ GD N       +       +D +
Sbjct: 256 PLAQKRHNREAYWEVTLRQIRQVSDLVGKETIPVILVGDMNNPPFGPFHRTLCEHLVDGH 315

Query: 232 DSLIRFPKEKDS--RCNANKNLRNKIPIDYFVMDQNA 266
                           N     R  + IDY +  + A
Sbjct: 316 SEAGHGYGYTFPGQTNNPLALFRPWLRIDYALHSKGA 352


>gi|134100769|ref|YP_001106430.1| hypothetical protein SACE_4236 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291008307|ref|ZP_06566280.1| hypothetical protein SeryN2_27631 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913392|emb|CAM03505.1| hypothetical protein SACE_4236 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 293

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 76/294 (25%), Gaps = 41/294 (13%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             +  ++++N+  L E    S   +    T      +R Y      D+V +QE       
Sbjct: 28  GGEFTVLTYNVAGLPEPLSGS---DPANNTPVIGERVRPY------DVVHVQE------- 71

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPLLGAKDSFSR 139
                 N     Y  +   + +         + +          L +        +    
Sbjct: 72  ----DFNYHDALYEADDHPHRTPTSGGVPFGSGLNTLSDFPLHGLDRVTWSQCWINEADC 127

Query: 140 AGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +      VE+  G ++   ++H  +           S    +    A+         
Sbjct: 128 LTPKGFTFTRVEVAPGVEVDFYNLHADAGDAPLDQAARRSNLIQVSDHMAEH-------- 179

Query: 199 KESLVPFVIAGDFNRKINYL-GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----- 252
             +    V+ GD N +         +F +     D  +R  +                  
Sbjct: 180 -SAGRAVVVMGDTNSRYTSSGDIVREFAQRNGLEDVWVRLVRGGVPPAVGEPAPGCDDET 238

Query: 253 --NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +D       A   L   S+             G  LSDH P+S  + +
Sbjct: 239 ADQCEVVDKIFYRGGAGVSLDATSYR--NERSGFRTQSGAPLSDHDPLSAGFRW 290


>gi|333027746|ref|ZP_08455810.1| putative endonuclease/exonuclease/phosphatase [Streptomyces sp.
           Tu6071]
 gi|332747598|gb|EGJ78039.1| putative endonuclease/exonuclease/phosphatase [Streptomyces sp.
           Tu6071]
          Length = 250

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 69/280 (24%), Gaps = 58/280 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++S+NI                     D   L +  +  D D+V +QE   +    K 
Sbjct: 22  VRVLSYNIR----------------SMRDDTAALGRVIRACDPDLVLIQEAPRFFRWRKA 65

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +          R                  +      V +    LL       R   R
Sbjct: 66  LSRLA--------RSAGLVTLAGGATAAGPALLCSLRATVERTEDVLLPLTPGLHR---R 114

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V     ++ V+  HL             S +      QA+ L +   +      
Sbjct: 115 GFSTAVVRFGAARLGVVSCHL-------------SLAKDERLAQARLLTERAERLGAPH- 160

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++ GD N             +  D         +   +  N          ID   + 
Sbjct: 161 -VLVGGDLNEGPEGKAFRHVAGRLRDAWAVRPWGGEFTSTAENPY------QRIDAMFVS 213

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDY 302
           +             +      ++    R  SDH P+    
Sbjct: 214 E---------GVEVLGCGVPTLEDADVRAASDHMPVLAVL 244


>gi|312379359|gb|EFR25658.1| hypothetical protein AND_08810 [Anopheles darlingi]
          Length = 808

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/331 (10%), Positives = 80/331 (24%), Gaps = 40/331 (12%)

Query: 13  LVPCTASVAQKVRLVSWNI--NTLSEQEG-----VSLWKNSVKRTTSDYTLLRQYAKNLD 65
           L   T     + R+VS+N+  +  ++ +                      LL +      
Sbjct: 374 LFTPTKLPPHQFRVVSYNLLADYYTDSDYSRTVLFGYCLPYALEMDYRKQLLIKELLGYR 433

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            DI+ LQE+ S      + P      F    +   ++         T      +   V+ 
Sbjct: 434 GDILCLQEVDSKIFDCDLLPILEQKHFAGCHQPKRNTAEGLATFYDTGKFDFIEKDSVIV 493

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKI------------WVLDIHLKSFCFLDSL 173
                    + + R  +   +   +      +            ++L  +   +   D+ 
Sbjct: 494 SEIME-QFPELWDRVSDNEPLVERIVKRSTALQLTLLRSRSANKYLLVANTHLYFHPDAD 552

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKIN------------YLG 219
                     +    +  +    +          +  GDFN                   
Sbjct: 553 HIRLLQFGFAMLHIRRTYERIRREHNLGGQELALLFCGDFNSVPECGIYRLMTERYVGPE 612

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVMDQNAYKFL-IQE 273
             D      +   ++        +         N  +     IDY     +  +   +  
Sbjct: 613 MADWLSNEQEAVRNVSLTQPFSMASACGCPPFTNYTVGFAACIDYIFYQTDLLQVTDVIP 672

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             SE      +        SDH  +  +  +
Sbjct: 673 MPSEEELKMYEAIPSPVFPSDHIALVANLQW 703


>gi|221639903|ref|YP_002526165.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides
           KD131]
 gi|221160684|gb|ACM01664.1| Endonuclease/exonuclease/phosphatase precursor [Rhodobacter
           sphaeroides KD131]
          Length = 240

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 73/282 (25%), Gaps = 54/282 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  + + S+NI+           K        D          LDAD+V LQE       
Sbjct: 3   AADITVASYNIH-----------KGVGTDRRRDLRRTAAVIAELDADLVALQEADRRFGD 51

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        +    +    R   +  H  + + +       Q   L          
Sbjct: 52  RAGLLDLEHLKDETGLVPVKVEGRGRAHGWHGNLLLVRDAEVEEVQKIVLPS-------F 104

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+ + V I G+ + V+  HL                 +  + Q + L + I     
Sbjct: 105 EPRGALMIDVVIRGRPLRVIAAHLGLLP-------------ASRAAQTRHLLERIE--AS 149

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           +  P ++ GD N         +              F      R   ++           
Sbjct: 150 TPRPTLLMGDLN---------EWRGTGAAMGHLARHFTGGVMVRSFPSRFP--------I 192

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +        L+     ++           +R SDH PI    
Sbjct: 193 LA----LDRLMTCKHGQLHDVSTHDTPLARRASDHLPIKARL 230


>gi|149029874|gb|EDL84986.1| deoxyribonuclease 1-like 1, isoform CRA_b [Rattus norvegicus]
          Length = 286

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 76/303 (25%), Gaps = 59/303 (19%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  V+A +  L+          R+ ++N + L+                S    L Q  
Sbjct: 19  MRGLVVASLLILLVGGT---DAFRICAFNAHRLTLT---------KVIKESVMDTLVQIL 66

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI+ LQE+   +                                +T + + +K  
Sbjct: 67  ARC--DIMVLQEVVDSS-------------------------------QNTVLFLLQKLQ 93

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPS 180
           R  +         +       R        +  K +  V+ + L +       E      
Sbjct: 94  RSDKTQVLNFYQYNDTEDIFAREPFVAQFTLPSKILPSVVLVPLHTTPKDVEKELNALYD 153

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             L   Q                  ++ GDFN     L         +           +
Sbjct: 154 VFLDVSQRWQ-----------NENVILLGDFNADCASLAKKRLNSLLLRTKAGFHWVIPD 202

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +              I   +  Q   K L   +  +        +    R+SDH P+ +
Sbjct: 203 GEDTTVRASTNCTYDRI--VMHGQGCQKLLKAAATFDFPRRFQLTEEEALRVSDHYPVEV 260

Query: 301 DYD 303
           + +
Sbjct: 261 ELN 263


>gi|111054099|gb|ABH04240.1| DNA lyase-like protein [Mycosphaerella fijiensis]
          Length = 622

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/336 (11%), Positives = 84/336 (25%), Gaps = 81/336 (24%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKN 87
           N+N +        W       +  ++ +    ++   DIV +QE  +   +    +   +
Sbjct: 4   NVNGIRNPFSYPPWN-----VSRTFSAMFDILES---DIVVMQELKIQRKDLRDDMVLVD 55

Query: 88  TWCIFYS-TERLINHSKRDSNNDIHTAIAVRKK------NVRVLQQSYPLLGAKDSFSRA 140
            W  ++S  +    +S         T   +R +              Y  L  +DS    
Sbjct: 56  GWDCYFSLPKHKKGYSGVGIYTRNATCAPIRAEEGVLGVLPSANGTPYRDLPDEDSIGGY 115

Query: 141 GNRRAVELLVEING---------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                +  + EI G          +  V+         + S  N+              L
Sbjct: 116 LTSVQMADIAEIGGEDPAGLDAEGRCVVVKSPAFVLFGVYSPANSNGLRDGFRHGFVCAL 175

Query: 192 KDWITQKKESLVPFVIAGDFNRKIN----------------------YLGNNDDFWKTID 229
              I    ++    ++ GD N   +                         N   F + + 
Sbjct: 176 DHRIRNLIKAGKSVILVGDLNVTRHEIDSGPTLEEMRKGLITHEEFISGPNRRIFNQQLI 235

Query: 230 PN------------DSLIRFPKEKDSRCNANKNL----------RNKIPIDYFVMDQNAY 267
                                +                           ID+ ++ +   
Sbjct: 236 DGEVVGERDEGREKGVFWDTTRIFHPDRKGMYTHWDTKVNARPGNFGSRIDFVLVSEALR 295

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++   +              G   SDHCP+ ID++
Sbjct: 296 SWVKYGNIQ-----------EGLLGSDHCPVYIDFE 320


>gi|315149551|gb|EFT93567.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0012]
          Length = 351

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 89/318 (27%), Gaps = 62/318 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP 179
             +   L           N  R  +E    I G  K++ V ++HL+++   D        
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFSIKGTDKELVVFNLHLEAYDNGDGKIA---- 228

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDD 223
                  Q++ L D ++Q+       +  GDFN+                    +   D 
Sbjct: 229 -------QSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPNLGEAGWAPGEIDPADL 281

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   D      +  +     +        ID F++  N     ++    +  Y   
Sbjct: 282 PKHFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT-- 339

Query: 284 DIKSRGKRLSDHCPISID 301
                     DH P+ ++
Sbjct: 340 ----------DHQPVKME 347


>gi|57640238|ref|YP_182716.1| membrane-bound metal-dependent hydrolase [Thermococcus kodakarensis
           KOD1]
 gi|57158562|dbj|BAD84492.1| membrane-bound metal-dependent hydrolase [Thermococcus kodakarensis
           KOD1]
          Length = 583

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 88/303 (29%), Gaps = 63/303 (20%)

Query: 6   VLALVFFLVPCTASV----AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +++++   +  T        + V + S+NI+        +               L +  
Sbjct: 337 LVSVIVLALFNTGPSYAESKKDVLIWSYNIHQGFGPYRGTFNGY----------ELVKLL 386

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKN 120
           +  + DI+  QE+        +       +       + ++       +    IA+    
Sbjct: 387 REHEPDIIASQEVVGG-----MIANGYQDVPLMLSAYLGYAYEYKPAVEGTYGIAIFSHW 441

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
               +    L            R A ++++E  G  I ++++H+               S
Sbjct: 442 RMNTEGELNLKSVG------QARPAQKVMIEELG--ITLVNVHMGL-------------S 480

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
               + QA+ L   ++  +      VI GD N + +           I   +    F + 
Sbjct: 481 EEERAMQAEEL---LSFAESEPAAHVILGDTNAEPDEKAI------QIITQEYKDAFEER 531

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                N          IDY ++ +     +            D        +SDH P+  
Sbjct: 532 PPYTFNWGDIDI--ENIDYILLRRGWPAKVK-----------DYGCLCEVEVSDHRPVWA 578

Query: 301 DYD 303
             +
Sbjct: 579 LIE 581


>gi|281343655|gb|EFB19239.1| hypothetical protein PANDA_014384 [Ailuropoda melanoleuca]
          Length = 282

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 85/284 (29%), Gaps = 32/284 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E              T+    + Q       DI  +QE+   +  AV
Sbjct: 22  SLKIAAFNIRTFGET---------KMSNTTLSHYIVQILSRY--DIAVVQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++          +   +++     ++         R   V V        G +   +  
Sbjct: 71  GRLLDILNQDDPDTYHYVVSEPLGRNSYKERYLFLFRPDQVSVRDSYQYDDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            NR    +        +     + L +       E        L  +Q   L+D      
Sbjct: 131 FNREPAIVWFHSPLTAVQEFAIVPLHAAPLDAVAEMDALYDVYLDVRQKWDLED------ 184

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                 ++ GDFN   +Y+  +      +  + +      +     +   +       D 
Sbjct: 185 -----IMLMGDFNAGCSYVTPSQWASIRLRTSPAFQWLIPDTADTTSTATHCAY----DR 235

Query: 260 FVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300
            V+     +  ++ +S +   +      S    + +SDH P+ +
Sbjct: 236 IVVAGTLLQHAIVPDSATPFDFQAAYGLSSQLTQAISDHYPVEV 279


>gi|62085892|gb|AAX63337.1| DNA lyase [Cordyceps brongniartii]
          Length = 580

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 73/303 (24%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    ++AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVILAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTI----------DPNDSLIR--------FPKEKDSR 244
                      +   +       + +          D  +  +           +     
Sbjct: 184 ESLRKEGILMDEWQSMPTRRILNQLLFEGSVIGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|319403495|emb|CBI77074.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 277

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/281 (11%), Positives = 74/281 (26%), Gaps = 51/281 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + S+N++     +                + + +    L  DI+ LQE         
Sbjct: 32  DLTIASYNVHKCVGVDKTFNP-----------SRIVRVIAELQTDILALQEADKRFGERT 80

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    +       N       A+  +   V   S   L           
Sbjct: 81  GLIDLQLLKAETGLIPVPLKTMSPNGHGWHGNALFLRQGCVHNISQITLPG------FEP 134

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+ + +++    I V+  H                     +QQ + L   + +   S+
Sbjct: 135 RGAIIVELKMKSDFIRVIATHFGLLRHS-------------RNQQVKMLLALLKKY--SV 179

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GD N         +         +    +         +  +    + +D    
Sbjct: 180 MPTLLIGDLN---------EWRKGKGSSLNFFSPYFDITLGSVPSFPSRFPFLALDRIFA 230

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +            ++  E+      +  SDH PI    +
Sbjct: 231 FPH----------QLLINVENHYSPLARIASDHLPIKAYLN 261


>gi|255536052|ref|YP_003096423.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10]
 gi|255342248|gb|ACU08361.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10]
          Length = 254

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 95/306 (31%), Gaps = 81/306 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++++S+N+N +                 +       + +  D DI+ +QE   G+     
Sbjct: 1   MKIISYNVNGIRA---------------AFTKNFVGWLEVADPDIICIQESKAGNDQIDI 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           + F K  +  ++ + +   +S           IA + K   V        G       + 
Sbjct: 46  ESFEKIGYHSYWHSAQKKGYSG--------VGIASKIKPNYVE------YGCGIEHYDSE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +     V+ +++ S   ++ L          L         +I   K++
Sbjct: 92  GRI-----IRADFDDFSVISVYVPSASNIERLGYKMEFCYDFL--------QYIKNLKKT 138

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +   +I+GDFN                         +   K ID  + +  F    D   
Sbjct: 139 IPNLIISGDFNICHKPIDIHNPEGLKNASGFLPIEREWLSKFIDECELIDSFRYFNDQP- 197

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           +DY  +  +  + L +    + +++           SDHC
Sbjct: 198 DYYTWWSYRQNSRERNKGWRLDYNFVSNSLKEKLSRAVILKEVFH-----------SDHC 246

Query: 297 PISIDY 302
           P+ ++ 
Sbjct: 247 PVLVEI 252


>gi|218188643|gb|EEC71070.1| hypothetical protein OsI_02823 [Oryza sativa Indica Group]
          Length = 903

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 81/286 (28%), Gaps = 17/286 (5%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSV--KRTTSDYTLLRQYAKNLDADIVFLQ 72
               A++ +++S+NI  + L+++      +              L         DI+ LQ
Sbjct: 185 PPRQAERFKVLSYNILADYLAQEHQFLYERIPSFIMDWNWRKEKLVFEFGLWSPDILCLQ 244

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+  +  + +      +   +                   AI  R    ++  Q      
Sbjct: 245 EVDKFTDLEQEMATRGYNGIWKMRTGNATDG--------CAIFWRTARFQLRYQEDIEFN 296

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF--CFLDSLENTYSPSCSLLSQQAQW 190
             D          +E ++  N +     +   ++      ++          +   Q + 
Sbjct: 297 KIDLRDNVAQICVLESVIPGNVQTESSPNHPQQAKQIVVCNTHVLYNPKRGDIKLGQVRT 356

Query: 191 LKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL-IRFPKEKDSRCNA 247
           L D +    +  +  P +I GDFN        N    + ++ +  +      ++ S    
Sbjct: 357 LLDRVYALSKTWNDAPVIICGDFNSTPKSPLYNFMLEQKLNLSGLVKSNISGQQTSTAQG 416

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                N           N+ +  I          E    +   RLS
Sbjct: 417 LYTGPNTARFYPPFHTTNSKEGSISYPNDHKPQPEARNVTENSRLS 462



 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 28/93 (30%)

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N    ++ +N          +               + N +    +DY    ++     +
Sbjct: 809 NEDCTFVEHNLKVRSVYTDVEDFEGTKDANKEPLVTSYNRKFMGTVDYIWASEDLQTVQV 868

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            ++F + +  +       K  SDH  +  +  F
Sbjct: 869 LDTFPKEILKQTIGFPTKKWGSDHIALVCELAF 901


>gi|325189143|emb|CCA23668.1| conserved hypothetical protein [Albugo laibachii Nc14]
 gi|325190841|emb|CCA25329.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 423

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/326 (9%), Positives = 74/326 (22%), Gaps = 74/326 (22%)

Query: 5   YVLALVFFLVPCTASVAQK--------------VRLVSWNINTLSEQEGVSLWKNSVKRT 50
           ++L+L   ++  +   A +              + L+++N+   +  +G ++W N     
Sbjct: 97  FILSLSTIMLSISEGKANEIGQVSGNAQQLGTILNLMTFNLQFANPDDGPNIWSNRK--- 153

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                 +          I+  +E              +  +  +T    ++ +     D 
Sbjct: 154 ----AHVLDIINEYKPTILGTRE-----------GLESQLVDIATNLTDSYKRFGIERDQ 198

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
            +   +            PL      ++    R     +  +   +      + +     
Sbjct: 199 GSNFWL---------SENPLDFGTIGWNANCVRLVTWCIFILFETQQTFYVFNTQFDQVG 249

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
              +             A+ L   I     +       GDFN   +             P
Sbjct: 250 KVSQYQS----------ARLLWHRIESIAGTNAIVFTLGDFNVYRDDAIYTYLTKYEEGP 299

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKI--------------PIDYFVMDQNAYKFLIQESFS 276
                           +      +                ID+ +               
Sbjct: 300 KFHDAWANAASKDGGVSYTYHAWQGPAYHLEKDKVEGLYHIDWILSRP---------YVK 350

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
            +          G   SDH P+    
Sbjct: 351 VLETKVITECRNGLYPSDHYPVQTKL 376


>gi|330947788|ref|XP_003306968.1| hypothetical protein PTT_20286 [Pyrenophora teres f. teres 0-1]
 gi|311315239|gb|EFQ84941.1| hypothetical protein PTT_20286 [Pyrenophora teres f. teres 0-1]
          Length = 441

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 86/309 (27%), Gaps = 33/309 (10%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           V AL   L    A  A     +++N+  L      +         T+    + Q     +
Sbjct: 8   VCALSSLLPLSIAQTAGTFNTLTFNVAGLPPVLNGNDVPGDKTTNTA---RIGQLFTKYN 64

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
             ++ +QE  +++A      K+      S            +N  +T            +
Sbjct: 65  ISLIHVQEDFNFHATLYANDKHPVRTPTSGGVPFGSGLNSLSNFEYTGF---------QR 115

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             +      DS      +    + V+I  G  I   ++H  +                  
Sbjct: 116 IKWNTCSTFDSADCLTPKGFTFMRVKIAEGVVIDAYNLHADAGTTD--------ADNKAR 167

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-------- 236
           +   + + D+I          ++ GD N +     +    +   +               
Sbjct: 168 ASNLRQVSDYIKANSI-GNAVLVFGDSNSRYTRTDDIPAVFSEQNGMKDTWLQLVRNGVA 226

Query: 237 -FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    C+          +D      +    L  ++F    +    ++  G  LSDH
Sbjct: 227 PAKGADALLCSNPATTNTCEIVDKTWYRGSPAVSLQAKTFDYAGHM--FLQENGDLLSDH 284

Query: 296 CPISIDYDF 304
             + +D+ +
Sbjct: 285 NGVLVDFAW 293


>gi|301779081|ref|XP_002924947.1| PREDICTED: deoxyribonuclease-1-like [Ailuropoda melanoleuca]
          Length = 284

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 85/284 (29%), Gaps = 32/284 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E              T+    + Q       DI  +QE+   +  AV
Sbjct: 22  SLKIAAFNIRTFGET---------KMSNTTLSHYIVQILSRY--DIAVVQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++          +   +++     ++         R   V V        G +   +  
Sbjct: 71  GRLLDILNQDDPDTYHYVVSEPLGRNSYKERYLFLFRPDQVSVRDSYQYDDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            NR    +        +     + L +       E        L  +Q   L+D      
Sbjct: 131 FNREPAIVWFHSPLTAVQEFAIVPLHAAPLDAVAEMDALYDVYLDVRQKWDLED------ 184

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                 ++ GDFN   +Y+  +      +  + +      +     +   +       D 
Sbjct: 185 -----IMLMGDFNAGCSYVTPSQWASIRLRTSPAFQWLIPDTADTTSTATHCAY----DR 235

Query: 260 FVMDQNAYK-FLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300
            V+     +  ++ +S +   +      S    + +SDH P+ +
Sbjct: 236 IVVAGTLLQHAIVPDSATPFDFQAAYGLSSQLTQAISDHYPVEV 279


>gi|332797485|ref|YP_004458985.1| exodeoxyribonuclease III Xth [Acidianus hospitalis W1]
 gi|332695220|gb|AEE94687.1| exodeoxyribonuclease III Xth [Acidianus hospitalis W1]
          Length = 245

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 84/298 (28%), Gaps = 75/298 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WN+N L                             L  D+V LQE+ + +    +
Sbjct: 1   MKIVTWNVNGLKAITRKGSLDEV-----------------LKYDVVMLQEIRTSDLPLDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +S +              ++ +    +   +       +   D   R    
Sbjct: 44  LFSGLAIESFSAK-----------KKGYSGVMTLTRYKPINVIKGLNVEEFDEEGR---- 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  +K+++++ +           +        + +    L++          
Sbjct: 89  -----VLTLEFEKLFLINSYFPRAGDELKRLDFKIKFDKTVEEFMMKLRER--------K 135

Query: 204 PFVIAGDFN-------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           P +I GDFN             R+        ++   +  +   I   K  +   N    
Sbjct: 136 PVIICGDFNAVRDRKDSSFWDEREPALTPQEREWLNHVINDLGFIDAYKLVNPNKNEFTW 195

Query: 251 LRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +     + IDY ++       +      +I              SDH P+ ++ +
Sbjct: 196 RSYRFKWKAMRIDYCLVSSELKNEIKNCEVLKIE------------GSDHYPLLLELN 241


>gi|254498808|ref|ZP_05111519.1| exodeoxyribonuclease III [Legionella drancourtii LLAP12]
 gi|254351972|gb|EET10796.1| exodeoxyribonuclease III [Legionella drancourtii LLAP12]
          Length = 260

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 88/303 (29%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N N +        +               ++    DAD V +QE  +     ++
Sbjct: 1   MKVISFNANGIRAAARNGFY---------------EWLVAQDADFVCIQE--TKAQPEQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+  +       R        +    ++ +A+  ++              D+  R    
Sbjct: 44  LPEEMYY-----PRDYFCDYYSAQKKGYSGVAIYARHKPTRIVKGIGYDYCDNEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ +  K+ V+ ++L S    D  +        +     +     + Q K    
Sbjct: 96  ------IQFDYPKLSVISLYLPSGTSGDGRQ-------EVKYDFLEQFAKHLIQLKNEGR 142

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GD+N     +   +                +   +  +   +   +  +      
Sbjct: 143 ELIICGDYNIAHKQIDLKNWRSNQKNSGFLPDERAWMDKLFGSMGFVDAFRVHNQEEEQY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY V+     + +I                R  RLSDH P  
Sbjct: 203 TWWSYRSRAWEKNVGWRIDYQVITPGLSEHVIDSRI-----------FREARLSDHAPFM 251

Query: 300 IDY 302
           I+Y
Sbjct: 252 IEY 254


>gi|68535324|ref|YP_250029.1| exodeoxyribonuclease III [Corynebacterium jeikeium K411]
 gi|68262923|emb|CAI36411.1| exodeoxyribonuclease III [Corynebacterium jeikeium K411]
          Length = 266

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 81/305 (26%), Gaps = 69/305 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                RT  D   +R++ +  + D++ LQE          
Sbjct: 1   MRIATWNIN--------------SVRTRED--RVREFLQRSEVDVLCLQETKCT------ 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       + +          +A+  +      Q+    G           
Sbjct: 39  ------DKQFPDFTDTGYEQAHFGLHSFNGVAILSRVGLADVQT--DFGQPGFNKDLDAE 90

Query: 144 RAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +A+E   +      + V  +++ +   +     +Y                    +++S 
Sbjct: 91  QALEARAIGATCGGVEVWSLYVPNGREIADPHYSYKLRWLDALAAYAAGSGVGASQRKSS 150

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
               + GD+N                  +   N     + ++            D   N 
Sbjct: 151 EKLCLVGDYNIAPRDEDVWDRSYFDGRTHVTPNERARLRALEDAG----LSAATDLIANE 206

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + ID                 +      D  + +GK  SDH P+
Sbjct: 207 YTYWDYQAMRFQKGEGMRID----------LQYARGITPTAARVDRDERKGKGASDHAPV 256

Query: 299 SIDYD 303
            +DY+
Sbjct: 257 IVDYN 261


>gi|312194022|ref|YP_004014083.1| endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
 gi|311225358|gb|ADP78213.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
          Length = 324

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 71/249 (28%), Gaps = 50/249 (20%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L +  +    D+V ++E+ +            + +  S      H              V
Sbjct: 117 LGRQIRADSPDVVVVEELSNVT---------YYGLMKSGALAGYHYSASRPQFGAFGAGV 167

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLEN 175
             +   +   + PL+G  DS         + + V +  G++  +  +H  S         
Sbjct: 168 WSRYP-LSDVAAPLVGGLDS---------LRVTVTLPTGQRFRLFAVHTLSP-------- 209

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               S S +      L D   + + + +P V+AGDFN   +     +     +       
Sbjct: 210 ---QSSSNVRVWRTQLADLRREVRATTLPVVLAGDFNATRDMRPFRNVLAAGVTD---AH 263

Query: 236 RFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                  +               +D+ ++                 +    ++      S
Sbjct: 264 DDVHAGWAPTWNAHFPILPPVWRLDHVLISPQ--------------FTATGLRVGKSYGS 309

Query: 294 DHCPISIDY 302
           DH P+  D 
Sbjct: 310 DHLPLVADL 318


>gi|29832617|ref|NP_827251.1| hypothetical protein SAV_6075 [Streptomyces avermitilis MA-4680]
 gi|29609737|dbj|BAC73786.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 257

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 72/279 (25%), Gaps = 52/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+NI                     D   L +     + D+V +QE   +    K 
Sbjct: 26  IRVLSYNIR----------------SMRDDTAALARVISACEPDLVLVQEAPRFFRWRKK 69

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S    +  S   +        ++R    R      PL            R
Sbjct: 70  LAP-----LASACGQVVLSGGATAAGPALLCSLRATVERTEDVLLPLTPGLHR------R 118

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V     ++ VL  HL             S   +   +Q   L D + +      
Sbjct: 119 GFATAVVRFGRARLGVLSCHL-------------SLQKNERYEQGGMLLDHLARLGTPHA 165

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             +  GD N + +         +  D   +     +   +  + +        ID  +  
Sbjct: 166 --IAGGDLNERPDGRTFKRLASELRDCWATAPWGAEYTSTPADPH------QRIDAILAT 217

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                             E D+    +  +DH P+    
Sbjct: 218 PGIEVLACGVPLGHPGVTEADL----RAATDHLPVLAAL 252


>gi|260907098|ref|ZP_05915420.1| exodeoxyribonuclease III [Brevibacterium linens BL2]
          Length = 251

 Score = 69.2 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 70/269 (26%), Gaps = 51/269 (18%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           +      D + LQE+ + N +A    ++T     S          D+       +AV  +
Sbjct: 4   WVDTAKPDFITLQEVRAANDIALKVLEDTGYTTIS---------HDAEAKGRAGVAVMAR 54

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           N  V  +        D +     R         +G  + ++  ++ S       +     
Sbjct: 55  NEPVEVREGL---GTDGYFDRAGRWLETDYRLGDGSLLTLVSAYVHSGEVDTPKQEDKYR 111

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------- 223
               ++ +   L              +I GD N         +                 
Sbjct: 112 FLDRMTLRLPELAKQADH-------VLITGDLNVCHTERDLKNWKANRKKAGFLPEERAY 164

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQES 274
           F         +                   +           IDY +      K  ++ +
Sbjct: 165 FDGFFGDVGYVDVHRDLSGDVDGPYTWWSMRGQAFDNNAGWRIDYQMATPALAKAAVKAT 224

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   D   S  +R SDH P+ IDYD
Sbjct: 225 V-------DKADSWAERWSDHAPLVIDYD 246


>gi|225867801|ref|YP_002743749.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           equi subsp. zooepidemicus]
 gi|225701077|emb|CAW97898.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           equi subsp. zooepidemicus]
          Length = 273

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 77/280 (27%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY------------------ 93
                + ++    + D++ LQE+            + +                      
Sbjct: 19  KKLFDMAEHILAQNYDVICLQEINQLIDSEAAVSLSGYQPIAGTPAIHQDNFALLLVNYL 78

Query: 94  ----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                +            +  H  +A+  K     Q S  L+ A D       RRA+   
Sbjct: 79  KKRGQSYYWSWAYNHIGYDIYHEGVAILSKEPI--QVSDILVSAVDDEYDYHTRRALLAQ 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             I+G+++ V+ +HL  F      E     +        Q L            P ++ G
Sbjct: 137 TTIDGREVAVVSLHLSWFDQGFVGEWQRLEAA------LQQL----------SCPVLLLG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        ++  DS                 +  ++ +    +D+    +
Sbjct: 181 DFNNPSGQEGYELILKSPLELQDSHQAADYVFGDHSIVAAIDGWEDNKEAFKVDHVFTSK 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     F+               +SDH  + +D ++
Sbjct: 241 A---------FTINSSKVTFDGGEAPVISDHYGLEVDLNW 271


>gi|167624152|ref|YP_001674446.1| endonuclease/exonuclease/phosphatase [Shewanella halifaxensis
           HAW-EB4]
 gi|167354174|gb|ABZ76787.1| Endonuclease/exonuclease/phosphatase [Shewanella halifaxensis
           HAW-EB4]
          Length = 1046

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 49/407 (12%), Positives = 95/407 (23%), Gaps = 127/407 (31%)

Query: 23  KVRLVSWNINTLSEQE--------GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            + L + N+               G +   +S +        L Q    LDAD++ L EM
Sbjct: 492 TITLATQNLFNFFNSPFGGDQNNFGQNRGADSYQEYEQQKAKLVQAILKLDADVLGLMEM 551

Query: 75  GSY--------NAVAKVFPKNTWCIFYSTERLINHSKRDSNND----------------- 109
            +           +      + +  + + +   +   R                      
Sbjct: 552 ENNGFGLDSAVADLVNAVNSHYFDEYPNADPHESTENRYVFVGFDHNGNQILDELDSIGS 611

Query: 110 --IHTAIAVRKKNVRVLQQSYPLLGAKD--------------------SFSRAGNRRAVE 147
             I T I  R   V + +    +L  +                        +  NR A+ 
Sbjct: 612 DAITTGIIYRPSKVSIERTKVVVLPQQKAPSIVNDFNEIIKDDKGEILESGQNYNRDALV 671

Query: 148 LLVEIN--GKKIWVLDIHLKSF------------------CFLDSLENTYSPSCSLLSQQ 187
           +   +N  GK++ +   HLKS                      D  +     SC  L   
Sbjct: 672 VTFIVNQTGKRLTMAVNHLKSKGSTCWEEWQDVEFGDATVWEDDPKDADKQGSCEHLR-- 729

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------------NDDFWKTID 229
                    + ++     +I GD N                            +     +
Sbjct: 730 VAAAVRLGDELEKIGGDRIIIGDLNAYAQEDPMLVLTSNPRNKTVMTASHTFINKQPQFN 789

Query: 230 PNDSLIRFPK-------------EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                +                 E+     +         +D+ ++  +    LI  +  
Sbjct: 790 QAGDPVAITHSYGYIDVLGLKAKERGETPWSYSYNDEVGSLDHILISPSLSGRLIDATDW 849

Query: 277 EILYNEDDIKSRG-------------------KRLSDHCPISIDYDF 304
            I   E  +                        R SDH P  +   +
Sbjct: 850 HINAIESALYDYNTEHKPDEVAGVPVFYAEDQFRSSDHDPAIMSLSY 896


>gi|170085645|ref|XP_001874046.1| inositol phosphophingolipids phospholipase C [Laccaria bicolor
           S238N-H82]
 gi|164651598|gb|EDR15838.1| inositol phosphophingolipids phospholipase C [Laccaria bicolor
           S238N-H82]
          Length = 430

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 79/320 (24%), Gaps = 58/320 (18%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              ++RL+S N   L           +  RT      + ++  + D DIV LQE+     
Sbjct: 2   SESEIRLLSLNCWGL--------KYVAKNRTE-RIQAIARFLADSDHDIVALQEIW---- 48

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAK 134
                  +   +  S  + + HSK   +  +   +A+  +   V     P          
Sbjct: 49  ----VFADYEHVLESVSKRLPHSKFFYSGALGAGLAIFTRFPIVTTSVNPYSLNGSPIDV 104

Query: 135 DSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            +      + A  + +       + + + HL +    D  E       +     A     
Sbjct: 105 AAGDWFVGKAAASVTILHPVLGHVQIFNTHLFAKGGEDGPEYNR----AHRLVNAWEFAK 160

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN----------NDDF--------------WKTID 229
              Q  E     +  GDFN     L            +                  + I 
Sbjct: 161 LTRQAAERGRYVIALGDFNSIPPTLPMTVIRDHASLTDSWVVTHPNPDATSVTNALEAIT 220

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF-------SEILYNE 282
                   P    S             +DY +  Q                     +   
Sbjct: 221 KLGITADSPLNSYSAAKGYAAGSWGKRLDYVLYRQPERHQTSPGQTFPLLKAKECKVVLT 280

Query: 283 DDIKSRGKRLSDHCPISIDY 302
           D +       SDH  +    
Sbjct: 281 DPVPGYNFSYSDHFGLDATL 300


>gi|62085874|gb|AAX63328.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRHLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFGGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|312277609|gb|ADQ62266.1| Metal-dependent hydrolase [Streptococcus thermophilus ND03]
          Length = 303

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 74/280 (26%), Gaps = 54/280 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +     +  L++       DI+  QE+      A V     + +  S             
Sbjct: 47  EDAEGKFQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHVLPSATSIHQDHFVRLL 106

Query: 96  ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 + ++  +AV  +      +   L+   D  +    RR 
Sbjct: 107 VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASE--ILVSDVDDPTDYHTRRV 164

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                 ++G+++ V  IHL  +      E                      + +    P 
Sbjct: 165 AVAETTVDGREVAVASIHLSWWDKGFQEEWARIE----------------ERFQSIGKPI 208

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260
           ++AGDFN      G        +   DS     K   S       +  K     + IDY 
Sbjct: 209 ILAGDFNNPAGREGYQTILASPLKLQDSFQVAQKTNGSYTVGPGIDGWKGNEEPLRIDYV 268

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              Q          ++    +     +    +SDH  +  
Sbjct: 269 FASQE---------WAVNRLSVIFDGNNQSLVSDHYGLEA 299


>gi|307111052|gb|EFN59287.1| hypothetical protein CHLNCDRAFT_137627 [Chlorella variabilis]
          Length = 390

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 85/314 (27%), Gaps = 46/314 (14%)

Query: 16  CTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
              S   ++ LVS+NI     +                  +  L+   +   AD++ LQE
Sbjct: 47  PLPSKPGELSLVSYNILCERYATGRRFPYVFAQYLDPDYRWARLQAELEAFGADLIALQE 106

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +     V +      +        ++      + +D   A+  R+  +R+          
Sbjct: 107 V----TVDRWMELKAFMASLGYTAVVQARAAATGSDFMLALFYRQGKLRLAWSKERSRVL 162

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             +        A        G+ +W+ ++HL      +      +   S L    Q L+ 
Sbjct: 163 LAALEVVEPGPA-------EGQVVWLANVHL------EGSPYRPNDRISQLKHALQRLEG 209

Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN------ 246
            I ++        +I GDFN             +      +       +           
Sbjct: 210 HIGSKDAAEAADVIICGDFNSLDQDSP--CWLLRRGRLERNHTDACCPQVPTTKETIAHP 267

Query: 247 -----ANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDD--IKSR 288
                A ++   + P           +D+    ++     +     + L           
Sbjct: 268 FALHEAYESSGYRQPFTHKVAQDHAVLDFIWCSRHMPVAAVMRPLQQELREVVGKCYLPN 327

Query: 289 GKRLSDHCPISIDY 302
               SDH P+    
Sbjct: 328 RWHPSDHLPVGAVL 341


>gi|169351346|ref|ZP_02868284.1| hypothetical protein CLOSPI_02126 [Clostridium spiroforme DSM 1552]
 gi|169291568|gb|EDS73701.1| hypothetical protein CLOSPI_02126 [Clostridium spiroforme DSM 1552]
          Length = 598

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 88/286 (30%), Gaps = 55/286 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +R+ ++NI                     +   LR+  +    ++V LQE+     
Sbjct: 186 SDDTLRIGTFNI---------------AANKQPNVDELRELTEKYKLEVVGLQEVDRNTG 230

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                P +    F ST     +  +  ++D     IA   K      ++  +    DS  
Sbjct: 231 RN---PYDMLNEFASTTYPSTYFSKAIDHDGGEYGIARASKYELTDGKTVNV----DSTG 283

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R    ++ +    +I   + HL               + ++  +Q + LK  I   
Sbjct: 284 ATEQRVYQRMVFKKGDYEIAFYNTHLSY------------ETEAIRKKQMKELKTAIQN- 330

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            +S    ++ GDFN   +       F   ++  D +  +  +     N          +D
Sbjct: 331 -DSTPYIIVTGDFNADQHRSE----FNLFLEELDMVNGYQGKWYDTFNGVDETMKVNSVD 385

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             ++ +N                 ++I+     LSDH  +     F
Sbjct: 386 NILVSRNLA--------------IENIEMVETSLSDHNLLLAQVKF 417


>gi|313224249|emb|CBY20038.1| unnamed protein product [Oikopleura dioica]
 gi|313245969|emb|CBY34943.1| unnamed protein product [Oikopleura dioica]
          Length = 602

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 99/338 (29%), Gaps = 69/338 (20%)

Query: 21  AQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   R+VS+NI +        S+        +          LL       +ADIV LQE
Sbjct: 263 SDHFRVVSYNILSDGLAETDFSKDGLFPYCSDEFVSWNHRSHLLLDEIIGYNADIVCLQE 322

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG- 132
           + S     K+F    +    +       + + ++ +   A+       +V    YP+ G 
Sbjct: 323 LDS-----KMFRGEFYKTLETEGFEGVFTNKSTSPEGTCALWRTSSFEKVKFNEYPINGA 377

Query: 133 --AKDSFSRAGNRRAVE----LLVEINGKKI---------------------------WV 159
              K+       R  V          +GK++                            +
Sbjct: 378 LLDKEESLFDDLRDVVMKCKPAKKMTDGKEVSNQKSGQLILQLPHVLQVLTLRSKATGKL 437

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           L I      +     NT +    ++S+  +  ++ + ++K   VP V  GDFN       
Sbjct: 438 LLICNTHLFWHPRGSNTRAVQSMVISRLIKREQEILKKEKGEEVPVVFCGDFNSVPERTA 497

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDS---------------------RCNANKNLRNKIPID 258
                 +T+ PND L  F   KD                         +N        +D
Sbjct: 498 VRYLTGETVYPND-LDFFTSGKDGILRFEKEVRSPIVFEYGVRPLPKYSNYVAPFIGLLD 556

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           Y ++  N         F      +          SDH 
Sbjct: 557 YILI-NNLDYVESCGDFKHEDVTKHSGIPSKVFPSDHL 593


>gi|17544859|ref|NP_518261.1| exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000]
 gi|17427148|emb|CAD13668.1| putative exodeoxyribonuclease III protein [Ralstonia solanacearum
           GMI1000]
          Length = 261

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 80/304 (26%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +        +               ++    DAD V +QE+         
Sbjct: 2   LRIISANLNGVRSAASKGFF---------------EWMGKQDADFVCVQELKCAQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +        +         A    +           ++G       A  R
Sbjct: 43  ---DMTPEFLAPHGYHGVFQHAVKKGYSGAGLYARHQP-----DDVIVGFDGGEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ ++ +++ S    +  +        L  Q    L+       E   
Sbjct: 95  Y-----VEARYGKLSIISVYVPSGSSGEERQQAKYRFMDLFMQHLTDLRH------EKGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N     +   +                +   +      +   +  D R    
Sbjct: 144 EVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWLTRLFDEVGYVDVFRTLDPRPEQY 203

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +            S             R  + SDH P++
Sbjct: 204 TWWSNRGQAYAKNVGWRIDYQIATPGIAATARSTSI-----------FRDIKFSDHAPLT 252

Query: 300 IDYD 303
           +DYD
Sbjct: 253 VDYD 256


>gi|159465185|ref|XP_001690803.1| CCR4-NOT transcription complex, subunit 6-like protein
           [Chlamydomonas reinhardtii]
 gi|158279489|gb|EDP05249.1| CCR4-NOT transcription complex, subunit 6-like protein
           [Chlamydomonas reinhardtii]
          Length = 369

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 78/300 (26%), Gaps = 56/300 (18%)

Query: 27  VSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++N+  +  +                S    + Q  ++  +DI+ LQE+ +     ++ 
Sbjct: 1   MTYNLLADKYARGGWHGYCPPQHLTWDSRRERILQEIESYSSDIICLQEVEAQVFAGELQ 60

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-------LGAKDSF 137
           P      +        +           A+  R +   + QQ   L         A  S 
Sbjct: 61  PWLAARGYRGHYLPRQYGDSVHGPPEGVALFYRTEVFDLEQQHSFLFNSVPTSPPAPGSM 120

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            +     A+  L+     K  +L      F      +     +  L S+ A +L   +  
Sbjct: 121 FKKRQEGAILALLRHRASKRQLLAACTHLFWNPAFADVKAFQATVLCSEMAGFLTRHVGP 180

Query: 198 KKESLVPFVIAGDFNR------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              S VP V+ GDFN             K+   G     +  +         P    SR 
Sbjct: 181 DAPSSVPVVLGGDFNSVACKRVPDVFDPKLPRDGQASGVYALLTRGSLPPSHPDHPASRR 240

Query: 246 NA-----------------------------------NKNLRNKIPIDYFVMDQNAYKFL 270
                                                 +       +DY  +    +  L
Sbjct: 241 RPGEAANADFKGQPLTTSGIQLASSYVVAHGMDPPLTTRTNNFAGCLDYIFVSPRHFDVL 300


>gi|269796550|ref|YP_003316005.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542]
 gi|269098735|gb|ACZ23171.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542]
          Length = 251

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 77/284 (27%), Gaps = 51/284 (17%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + A  +R++S+N+ +L                  D   +R   +  D D+V +QE     
Sbjct: 14  AAAPTLRVLSYNVKSL----------------QMDAAAVRDVIRESDPDVVAIQE--PCR 55

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +     +       +    +            TA+ V +++   + +      +   + 
Sbjct: 56  YLTGGRRRMRALAAATGTVCVVPGG-SPFGAYTTALLVARRHEASVVRRRGRPLSWRWWR 114

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R   R           ++   L            L           ++ A+ ++      
Sbjct: 115 RRDLRA-------WPTRRGSALVDLGDVVVVSVHLGLDARERLEHCAEVARLVER----- 162

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                  V+AGD N +          W+ +      +      ++        R    ID
Sbjct: 163 -AGAHRCVVAGDLNEEPGGPS-----WQALGS----LLRDAVPEAPGLTFAAPRPVRRID 212

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ++                  +         R SDH P+ ++ 
Sbjct: 213 GVLVGDGFEVLS----------STVLRTPAALRGSDHLPLLVEL 246


>gi|62085804|gb|AAX63293.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMSEWQSMPTRRILNQLLFKGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|254514282|ref|ZP_05126343.1| exodeoxyribonuclease III [gamma proteobacterium NOR5-3]
 gi|219676525|gb|EED32890.1| exodeoxyribonuclease III [gamma proteobacterium NOR5-3]
          Length = 267

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 89/314 (28%), Gaps = 79/314 (25%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-- 73
            ++SVA+  R+VS+N N +   +    +               ++      DIV +QE  
Sbjct: 2   ASSSVAKT-RVVSFNANGIRAAQRKGFF---------------EWMARESPDIVCIQETK 45

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
              +    + F    +   Y+      +          +  AV  +       +      
Sbjct: 46  AQVHQLTDEAFHPQGYHCVYNDAERKGY----------SGTAVYSRVKPRSVTTRLGWEP 95

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            D   R          ++ +   + V+ +++ S    D+       +        +   +
Sbjct: 96  VDGEGRY---------LQCDFAGLSVISLYVPSGSSSDA-------ALEKKFTFMELFLE 139

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFP 238
            +   K     F+I  D+N     +   +                +   I      +   
Sbjct: 140 HLRVLKRKRREFIICADWNTCHQNIDLRNWRANQKNSGFLPEERAWLDQIYDEIGFVDSF 199

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +  D+  +      N+           +DY ++       +   S               
Sbjct: 200 RVADTEPDRYTWWSNRGQAWANNVGWRLDYQMITPKLVPAVSGASI-----------YTE 248

Query: 290 KRLSDHCPISIDYD 303
           +R SDH P  ++++
Sbjct: 249 ERFSDHAPQIMEFE 262


>gi|194367178|ref|YP_002029788.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
 gi|194349982|gb|ACF53105.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
          Length = 245

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 77/287 (26%), Gaps = 60/287 (20%)

Query: 27  VSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++ NI   S     S +            R  S    +   A+    DIV LQE    + 
Sbjct: 2   LTANIQAGSSTRRYSDYVTRSWSHALPAGRKRSSLDAIATLAREH--DIVGLQEADPGSL 59

Query: 80  VAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +    +  +    +     +H   R       +A  +  K   V  Q + L G      
Sbjct: 60  RSGFTNQTHYLAQRAGFNYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHALPG------ 113

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R G R  +          + V   HL                      Q  ++ + ++  
Sbjct: 114 RIGGRGVLLAKFGDGEDGLAVAVAHLSLGAGS-------------RMSQLGFIAELLSDH 160

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NANKNLRNKIP 256
             +    V+ GDFN           + K            + +   C      + R    
Sbjct: 161 PNA----VLMGDFNCLAERPEMQVLYQK-----------TRLQPPGCIVPTFPSWRPDRA 205

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ID+ ++        ++                    SDH  +++  D
Sbjct: 206 IDHILVSSGLQTRTVEAVP--------------AAFSDHLALAMAID 238


>gi|258515007|ref|YP_003191229.1| exodeoxyribonuclease III [Desulfotomaculum acetoxidans DSM 771]
 gi|257778712|gb|ACV62606.1| exodeoxyribonuclease III [Desulfotomaculum acetoxidans DSM 771]
          Length = 259

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 77/305 (25%), Gaps = 72/305 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             +  S+NIN                   +   LL  +      D++ LQE         
Sbjct: 2   TFKAASFNIN----------------SIRARKELLINWLLQSKPDLLCLQET-------- 37

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                         R I ++        +  +A+   +              ++      
Sbjct: 38  --KVMDKDFPVQDFRDIGYNTLFKGQKSYNGVAILSPHDLTRV----DSDLGEAAEPGEA 91

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     +     K I+V++ ++       S +  +           + ++D+ T+     
Sbjct: 92  RLLAAQV-----KGIYVVNTYIPQGQDPKSPKFIHK------LNWIRAMRDYFTRNFTPE 140

Query: 203 VPFVIAGDFNRKINYLGNNDDF------------WKTID--PNDSLIRFPKEKDSRCNAN 248
            P +  GDFN     +  +D               K +            ++        
Sbjct: 141 QPVLWLGDFNVAPEPIDIHDPKRLLGHVGFHPEEHKVLAHVKEWGFQDIFRKHKPEGGHY 200

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            +D+    +      +           D    + ++ SDH  I
Sbjct: 201 TFWDYRVPRGVERNLGWRVDHIWGTRAIADRSMDSWV-------DIEPRKLEKPSDHTFI 253

Query: 299 SIDYD 303
             +++
Sbjct: 254 MAEFN 258


>gi|255074455|ref|XP_002500902.1| predicted protein [Micromonas sp. RCC299]
 gi|226516165|gb|ACO62160.1| predicted protein [Micromonas sp. RCC299]
          Length = 301

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 80/317 (25%), Gaps = 81/317 (25%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75
             K+ ++SWN+N            +       D  +L + A + DAD+V LQE       
Sbjct: 23  PSKLTVLSWNVN------------SIRALLDKDPDILDEVAASEDADVVLLQETKLQEKH 70

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                A+V  K  +  +  +   + +S                    +     P     +
Sbjct: 71  VPEMDARVLAKYPYRTWNCSTSRLGYSGTAMFLR-------------LEPTRAPWHDPFE 117

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                G  R V   +        V      S   L  L          +S     L+   
Sbjct: 118 MDEFEGEGRVVCAELP---NVFVVGAYCPNSGEGLARLRARTKEWDPRMSAYLSSLQA-- 172

Query: 196 TQKKESLVPFVIAGDFN-----------------RKINYLGNNDDFWKTI------DPND 232
                   P V  GD N                          D F + +          
Sbjct: 173 ---SAGGKPVVYCGDLNVANEPIDLWGNHAANSLASGYTPEERDSFKRLLLGPIRDGGAG 229

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            +  F +   +   A      +           IDY ++ ++    +            D
Sbjct: 230 LVDTFREAHGTDAKAFTYFSYRAGARPRNRGWRIDYALVSESLRGEVH-----------D 278

Query: 284 DIKSRGKRLSDHCPISI 300
                    SDHCPI +
Sbjct: 279 AFIRGDVGGSDHCPIGV 295


>gi|259089125|ref|NP_001158599.1| Deoxyribonuclease gamma [Oncorhynchus mykiss]
 gi|225705192|gb|ACO08442.1| Deoxyribonuclease gamma precursor [Oncorhynchus mykiss]
          Length = 306

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 78/288 (27%), Gaps = 33/288 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +++ S+N+  L           S     +    L +        +  + E+         
Sbjct: 1   MKVASFNVRRLGT---------SKVADKNVLKYLIKIVSRYS--VFLILEVVDRTGQAMT 49

Query: 79  -AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + ++           T        RD+  +       R+ +V++    Y     +   
Sbjct: 50  TFLNELNDTRANKKHPYTMVKSTRLGRDTYKEQFV-FLYREDHVKLTDS-YQYKDNQVGD 107

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             A  R    L        +  L +        DS++        +             +
Sbjct: 108 EDAFAREPYILRFTCLNTVLKDLVLIPVHTKPEDSVKELDELYDVVKVV----------K 157

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           +K      +I GDFN   +Y+         I  +        +         N      I
Sbjct: 158 RKWKTDNIMILGDFNADGSYVTKKGMTNIRIRSDKKFHWVIGDDVDTTANTSNDHTYDRI 217

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS--DHCPISIDYD 303
              +   +  + ++  S     Y++    S    LS  DH P+ ++  
Sbjct: 218 --VMYGDDMLEAMVPNSAKPFNYHKAFHLSEAMALSISDHYPVEVELT 263


>gi|92859618|ref|NP_003071.2| sphingomyelin phosphodiesterase 2 [Homo sapiens]
 gi|160332206|sp|O60906|NSMA_HUMAN RecName: Full=Sphingomyelin phosphodiesterase 2; AltName:
           Full=Lyso-platelet-activating factor-phospholipase C;
           Short=Lyso-PAF-PLC; AltName: Full=Neutral
           sphingomyelinase; Short=N-SMase; Short=nSMase
 gi|56203787|emb|CAI23338.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [Homo sapiens]
          Length = 423

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 73/298 (24%), Gaps = 46/298 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  +N+N         +   S  R       L  +      D+  L+E+ S      +
Sbjct: 9   LRI--FNLN------CWGIPYLSKHRAD-RMRRLGDFLNQESFDLALLEEVWSEQDFQYL 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFS 138
             K +             +    +  I + + V  K+       +               
Sbjct: 60  RQKLS--------PTYPAAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGD 111

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +    L++ ++G  +     HL +               +    QA  L  +I   
Sbjct: 112 WFSGKAVGLLVLHLSGMVLNAYVTHLHA-----EYNRQKDIYLAHRVAQAWELAQFIHHT 166

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--------- 249
            +     ++ GD N             K            ++       N          
Sbjct: 167 SKKADVVLLCGDLNMHP--EDLGCCLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVS 224

Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     + IDY +  +    F I                RG  LSDH  +    
Sbjct: 225 QQELKPFPFGVRIDYVLY-KAVSGFYISC--KSFETTTGFDPHRGTPLSDHEALMATL 279


>gi|331217377|ref|XP_003321367.1| hypothetical protein PGTG_02409 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309300357|gb|EFP76948.1| hypothetical protein PGTG_02409 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 365

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/219 (10%), Positives = 54/219 (24%), Gaps = 10/219 (4%)

Query: 24  VRLVSWNINTLS-------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +++ ++NI               + L  +      S   L+         DI+  QE+  
Sbjct: 9   MKIATFNIRYSPFKPSSQLASNQILLAGDGEAPWASRLPLIMDQINWESPDIIGFQEVLE 68

Query: 77  YN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +    +        +                      T                P +   
Sbjct: 69  HQYHDLKDQAFFRQYTSVGVGRDDGVTRGEYVPLFWRTDKFQALSVKHFWLSDQPDVPGS 128

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             +     R    + ++     +   +     F  +++  +         S +   L+  
Sbjct: 129 IGWDAGQTRMVTLVHLQPISADVSPDEESKPPFFVMNTHFDDRGLKARTESAKL-ILRKA 187

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                E+ +P ++ GDFN             KT D    
Sbjct: 188 NELITETGLPILLMGDFNAPSQEAAYKVLTGKTSDDGTL 226


>gi|115438464|ref|NP_001043546.1| Os01g0610600 [Oryza sativa Japonica Group]
 gi|53791480|dbj|BAD52532.1| endonuclease/exonuclease/phosphatase family protein-like [Oryza
           sativa Japonica Group]
 gi|113533077|dbj|BAF05460.1| Os01g0610600 [Oryza sativa Japonica Group]
          Length = 903

 Score = 69.2 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 81/286 (28%), Gaps = 17/286 (5%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSV--KRTTSDYTLLRQYAKNLDADIVFLQ 72
               A++ +++S+NI  + L+++      +              L         DI+ LQ
Sbjct: 185 PPRQAERFKVLSYNILADYLAQEHQFLYERIPSFIMDWNWRKEKLVFEFGLWSPDILCLQ 244

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+  +  + +      +   +                   AI  R    ++  Q      
Sbjct: 245 EVDKFTDLEQEMATRGYNGIWKMRTGNATDG--------CAIFWRTARFQLRYQEDIEFN 296

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--FLDSLENTYSPSCSLLSQQAQW 190
             D          +E ++  N +     +   ++      ++          +   Q + 
Sbjct: 297 KIDLRDNVAQICVLESVIPGNVQTESSPNHPQQAKQIIVCNTHVLYNPKRGDIKLGQVRT 356

Query: 191 LKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL-IRFPKEKDSRCNA 247
           L D +    +  +  P +I GDFN        N    + ++ +  +      ++ S    
Sbjct: 357 LLDRVYALSKTWNDAPVIICGDFNSTPKSPLYNFMLEQKLNLSGLVKSNISGQQTSTAQG 416

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                N           N+ +  I          E    +   RLS
Sbjct: 417 LYTGPNTARFYPPFHTTNSKEGSISYPNDHKPQPEARNVTENSRLS 462



 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 28/93 (30%)

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N    ++ +N          +               + N +    +DY    ++     +
Sbjct: 809 NEDCTFVEHNLKVRSVYTDVEDFEGTKDANKEPLVTSYNRKFMGTVDYIWASEDLQTVQV 868

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            ++F + +  +       K  SDH  +  +  F
Sbjct: 869 LDTFPKEILKQTIGFPTKKWGSDHIALVCELAF 901


>gi|301782323|ref|XP_002926565.1| PREDICTED: deoxyribonuclease-1-like 2-like [Ailuropoda melanoleuca]
          Length = 278

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 83/286 (29%), Gaps = 41/286 (14%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAK 82
           R+ ++NI +           +S     +   ++ Q       DI  +QE+   +  AV+ 
Sbjct: 23  RIGAFNIQSFG---------DSKVSDPACGGIIAQILAGY--DITLVQEVRDPDLSAVSA 71

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  +      +    + +                RK  V V+               A +
Sbjct: 72  LMEQINSVSRHEYSFVSSEPLGRDQYKEMYLFVYRKDAVSVV-----DTYQYPDPEDAFS 126

Query: 143 RRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           R    +     G    +  ++ +H        +     +   +L       +  W     
Sbjct: 127 REPFVVKFSAPGSAAGEFVLIPLHA-------APHRAVAEIDALYDVYLDVIDKW----- 174

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                 +  GDFN   NY+   D     +  ++       +       N +       D 
Sbjct: 175 -GTDDLLFLGDFNADCNYVREGDWPSVRLRSSEVFKWLIPDSADTTVGNSDCAY----DR 229

Query: 260 FVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
            V       + L  +S +   + E+    + + L  SDH P+ +  
Sbjct: 230 IVACGARLRRRLKPQSAAVHDFQEEFGLDQAQALAISDHFPVEVTL 275


>gi|91080695|ref|XP_975263.1| PREDICTED: similar to carbon catabolite repressor protein
           [Tribolium castaneum]
          Length = 481

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/237 (10%), Positives = 66/237 (27%), Gaps = 14/237 (5%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLW----KNSVKRTTSDYTLLRQYAKNLDADIVF 70
           P  AS      ++++N+                +    +  + +  L    +NL+ DI+ 
Sbjct: 108 PNNASSGFVFSVMTYNVLAQDLVNQHPYLYALHRKDSLKWDTRWNNLLAEIRNLNPDILC 167

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ + +          +    +      + +R        AI  +   + +L+     
Sbjct: 168 LQEVQNTHL------DQYFSTLDTLGYQGLYKQRTGPRTDGCAIYYKPHLLTLLEHETVE 221

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                +     +  A+        +      +      +    ++       LL  +   
Sbjct: 222 YNQPTTRLLDRDNVAIIAKFASKSRPSHPFVVATTHLLYNPKRQDVRLAQTQLLLAEI-- 279

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             D I     + +P ++ GD N   +           +   D  +       +    
Sbjct: 280 --DRIAFNSSTYLPVILTGDLNSTPDSALYKFISSGFLRREDLALIRSPRSQTGFYG 334


>gi|118379737|ref|XP_001023034.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89304801|gb|EAS02789.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 345

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 54/293 (18%), Positives = 91/293 (31%), Gaps = 36/293 (12%)

Query: 22  QKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMG---- 75
            ++++V +NI       +G +               +    K L DAD++ L E+     
Sbjct: 76  DQLKVVEYNIDRNGFGGDGPN---------EKGIQPIIDALKTLGDADVIILSEVARDCP 126

Query: 76  ---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLL 131
              SYN   ++         YS E L   +         T   A+               
Sbjct: 127 QWGSYNGAEEIARAFKMDWAYSVEFLELDNSLFKLGYQCTIGNAILSNRPLSNIIQKQFK 186

Query: 132 GAKDSF-SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                F  RAG R A++  +E     I ++  HL+S     +    +  +     +Q+Q 
Sbjct: 187 TQCCMFSGRAGGRVAIKATIESYN--ITLISSHLESG----TGFEDFIDAMITREKQSQE 240

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L D I   +E     +I GDFN  +        F +  DP      +P       +    
Sbjct: 241 LVDMIDPIEEENKLIIIGGDFNSPLRQFNKGKPFREYQDPFMFKYLWPHRNTCVGDTLGY 300

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  DY     +         +    +        G   SDH PI ++  
Sbjct: 301 FGL-SAFDYLYFKNH-------HGYHLDSFICKSQACTGF--SDHFPIQVNIS 343


>gi|291221066|ref|XP_002730544.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 404

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 91/334 (27%), Gaps = 73/334 (21%)

Query: 2   IRKYVLALVFFLVPCTA----SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           +R   L +   +V        +   ++ L ++NI  +                      +
Sbjct: 7   LRYLALTICVTVVVNKPLKPLTQYGEITLATYNIWNIMFN------------WDIRKYRI 54

Query: 58  RQYAKNLDADIVFLQEMGSYNA------------VAKVFPKNTWCIFYSTERLINHSKRD 105
            +  ++++ DI+  QE+ S +             + ++ P + W  F + + +  +    
Sbjct: 55  AEMIRDVNPDIIGFQEVRSDSWSGSWQGRNQLTELQELLPYHKWKAFVAVQHVKEYPGTV 114

Query: 106 SNNDIHT-AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIH 163
                    + +  ++  +   +  L     S     NR  + + V +     + V  +H
Sbjct: 115 HGLGFSVEGLGLLSRHPILNTTTQHLTVTA-SSPDKNNRHVLHVNVLVPNIGAVHVAVVH 173

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF-VIAGDFNR--------- 213
           L                    +QQ   + +     ++S  P  VI GDFN          
Sbjct: 174 LSYD----------------RNQQCNNVLEIAQYLQDSHFPLSVIMGDFNIYQGFEQPLE 217

Query: 214 -------KINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNK-----IPID 258
                    +     + F + I             KE  +  +                D
Sbjct: 218 RLMKGYFTSSSGCPKNTFLEHIQDPSKTTLYKDAWKETHAHEDGFTFSNMPAPGMESRPD 277

Query: 259 YFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKR 291
             ++   +     +        Y E  I      
Sbjct: 278 RILVSANDLMVKDVNILGDGQSYREQFIDRIWWN 311


>gi|255948092|ref|XP_002564813.1| Pc22g07970 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591830|emb|CAP98085.1| Pc22g07970 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 477

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 41/351 (11%), Positives = 78/351 (22%), Gaps = 76/351 (21%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           + P  +     +R++++N   L       + K   +R +     L     +   +IV LQ
Sbjct: 2   VCPIPSKAPSDIRILTFNCWGL-----KYIAKYRHERMSEIGRQLA--VASPPPEIVGLQ 54

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL- 131
           E  +      +  +    + Y                    +A+  K        +    
Sbjct: 55  ECWTQKDYESIRDQTRHILPYGKFYYGGIFGA--------GLAILSKWPIEESSMFGYPL 106

Query: 132 ----GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                A         +      V        V ++           E   S  C   + Q
Sbjct: 107 NGRPTAFFRGDWFVGKGVACARVRFGPGTADVAEVFCTHLHAPYEREPNDSYLC-HRTAQ 165

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY--------LGNNDDFWKTIDPNDSL----- 234
           A  +   +    E     +  GDFN   +              D W+ + P+ SL     
Sbjct: 166 AWEISKLMRGAAERGHLVIGLGDFNMLPSSFAHRLITAQSPVRDAWRELHPDSSLAAAID 225

Query: 235 -------------------IRFPKEKDSRCNANK------------------NLRNKI-P 256
                                   +                               +   
Sbjct: 226 PVEKARNRPIPTAEFNLTENGATCDGSFNTWRWTEAMRKRLDKGEDIVVDKDTPDPRGKR 285

Query: 257 IDYFVMDQNAYKFLIQESFS----EILYNEDDIKSRGKRLSDHCPISIDYD 303
           +DY  +    Y      S        +       +    LSDH  +     
Sbjct: 286 LDYIFIGDGGYPPAFPPSTWSVQSVQISMTQRHPTLLCSLSDHFAVEAVIT 336


>gi|319411485|emb|CBQ73529.1| related to CCR4-transcriptional regulator involved in carbon
           catabolite repression [Sporisorium reilianum]
          Length = 806

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/342 (11%), Positives = 92/342 (26%), Gaps = 64/342 (18%)

Query: 22  QKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +   ++S+NI     +  +      +           + Q   +  ADI  LQE+G    
Sbjct: 443 ESFNVLSYNILFDRYATAQMYGYTPSWALAWDYRKEFILQEVMSYSADICCLQEVGVEQY 502

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSY------- 128
                   +   +       + ++   + +       AI  +    +++++         
Sbjct: 503 EDYFLHHLSQQDYEGVFYPKSRARTMRDEEKRRVDGCAIFFKSNKWQLIEKQLVEFNQIA 562

Query: 129 ----PLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                   ++D ++R   +  + ++      ++G ++ V ++H           +     
Sbjct: 563 LQRPDFKKSEDMYNRVMTKDNIAVIALLENRLSGSRLVVANVHTHW---DPQFRDVKLVQ 619

Query: 181 CSLLSQQAQWLKDWITQKKESLV-----------------PFVIAGDFNRKINYLGNNDD 223
            ++L  + +       +                       P +I GDFN      G  D 
Sbjct: 620 VAMLMDEVEKAGARFAKLPPKPSVAEGYPPPPKYTHANQIPTLICGDFNSVP-ETGVYDF 678

Query: 224 FWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKIPIDYFVM 262
                 P D          +                         N     +  IDY   
Sbjct: 679 LASGAVPGDHEDFMHHVYGNYTAQGLQHSYKLESSYVPIGELAFTNYTPGYEGAIDYIFY 738

Query: 263 DQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +N      +     +   ++          SDH  I  +++
Sbjct: 739 TKNTLSVTGVLGDIDKQYLSKVVGFPNAHFPSDHICIMSEFN 780


>gi|147814926|emb|CAN70311.1| hypothetical protein VITISV_022886 [Vitis vinifera]
          Length = 1856

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/291 (10%), Positives = 76/291 (26%), Gaps = 69/291 (23%)

Query: 22   QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            QK+++++WN+   ++               S   ++  Y +N   D++ +QE        
Sbjct: 889  QKMKIITWNVRGANDS--------------SKRKIIXNYIRNQRVDLMCIQETKIQEMSE 934

Query: 82   KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             +        F     L               I +      +                  
Sbjct: 935  GIVRSLGSGRFLDWRALNAEGAAG-------GILICWDKRVLE-----------ILDWEE 976

Query: 142  NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             + ++    +   NG       ++                +   L               
Sbjct: 977  GQFSLSCRFKTIENGATWVFTGVYGPFTKVEREGMWEELGAIRGLW-------------- 1022

Query: 200  ESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
                P+ + GDFN  +     +           F + +D  + +    +  +   +   N
Sbjct: 1023 --DDPWCLGGDFNITLFQHERSSQRRTSSAMRRFAEFVDDLELVDLPLQGGEFTWSGGLN 1080

Query: 251  LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +    +D F++  +              ++        +  SDH PI ++
Sbjct: 1081 NQAWARLDRFLVSPS----------WLDQFSGVTQGRLSRPTSDHFPIVLE 1121


>gi|314966021|gb|EFT10120.1| conserved domain protein [Propionibacterium acnes HL082PA2]
 gi|314981905|gb|EFT25998.1| conserved domain protein [Propionibacterium acnes HL110PA3]
 gi|315090720|gb|EFT62696.1| conserved domain protein [Propionibacterium acnes HL110PA4]
 gi|315094968|gb|EFT66944.1| conserved domain protein [Propionibacterium acnes HL060PA1]
 gi|315104193|gb|EFT76169.1| conserved domain protein [Propionibacterium acnes HL050PA2]
 gi|327328097|gb|EGE69866.1| endonuclease/exonuclease/phosphatase family protein
           [Propionibacterium acnes HL103PA1]
          Length = 242

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 51/181 (28%), Gaps = 21/181 (11%)

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F+ A    A     E + +    +  H KS    +        S      QA+ L  W+ 
Sbjct: 18  FANARQPLAQRFQPESSKRTFVAVVNHFKSKGSGEDDGTDQGKSNPSRVAQAKALTGWVN 77

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +      P  + GDFN                          +E D    + +       
Sbjct: 78  KTFADD-PVFMLGDFNAYAMEDPIRAMKTSGFSE------VVEEHDPDAASYEFSGRVGS 130

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------------LSDHCPISIDY 302
           +D+   +  A++ +      +I  +E       +R               SDH P  + +
Sbjct: 131 LDHIFANAKAHELVSGAGIWDINGSESVAMQYSRRNDNVTDFYTTSPFGASDHSPALVGF 190

Query: 303 D 303
            
Sbjct: 191 S 191


>gi|282854654|ref|ZP_06263989.1| conserved domain protein [Propionibacterium acnes J139]
 gi|282582236|gb|EFB87618.1| conserved domain protein [Propionibacterium acnes J139]
          Length = 236

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 51/181 (28%), Gaps = 21/181 (11%)

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F+ A    A     E + +    +  H KS    +        S      QA+ L  W+ 
Sbjct: 12  FANARQPLAQRFQPESSKRTFVAVVNHFKSKGSGEDDGTDQGKSNPSRVAQAKALTGWVN 71

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +      P  + GDFN                          +E D    + +       
Sbjct: 72  KTFADD-PVFMLGDFNAYAMEDPIRAMKTSGFSE------VVEEHDPDAASYEFSGRVGS 124

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------------LSDHCPISIDY 302
           +D+   +  A++ +      +I  +E       +R               SDH P  + +
Sbjct: 125 LDHIFANAKAHELVSGAGIWDINGSESVAMQYSRRNDNVTDFYTTSPFGASDHSPALVGF 184

Query: 303 D 303
            
Sbjct: 185 S 185


>gi|226532622|ref|NP_001141499.1| hypothetical protein LOC100273611 [Zea mays]
 gi|194704824|gb|ACF86496.1| unknown [Zea mays]
          Length = 443

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/332 (10%), Positives = 87/332 (26%), Gaps = 42/332 (12%)

Query: 15  PCTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVF 70
             T+S      ++S+NI           + L       R  S   L+ +  ++ D D+V 
Sbjct: 91  ASTSSSGDACTIMSYNILADYNARNHPDLYLDAPWDAMRWDSRRRLIIREIRHWDPDVVC 150

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-----NVRVLQ 125
           LQE+  +  +A       +   +                      V +         +  
Sbjct: 151 LQEVDRFQDIAAGMKSRGYEGIFQRRTGDTRDGCAIFWKSKQLHLVEEDSIDFSEFNLRN 210

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV--LDIHLKSFCFLDSLENT------- 176
               +   + + +       + +L       + +  + + L++   L    +        
Sbjct: 211 NVAQICVFELNGTHKFVLGNIHVLFNPKRGDVKLGQIRMLLENANALAEKWDKIPIVLAG 270

Query: 177 --YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
              S   S + +    +K  I+      +  + + +F  ++  L       + +      
Sbjct: 271 DFNSTPDSAIYKFLSTMKLNISLHDRRHLSGLDSTEFGYELCSLLKYQWTDEEVRNATGY 330

Query: 235 IRF----------------------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                              + + +    +DY           + 
Sbjct: 331 SNVMVAEHPLKLSSSYAMLKGNSNNRGLHGEPLATSYHRKFLGTVDYLWHTHGIECSRVL 390

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           E+    +          +  SDH PI  ++ F
Sbjct: 391 ETLPISVLKRTRGLPTREIGSDHLPIVAEFAF 422


>gi|17510359|ref|NP_493461.1| hypothetical protein Y63D3A.4 [Caenorhabditis elegans]
 gi|75028976|sp|Q9XWG3|TDP2_CAEEL RecName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA
           phosphodiesterase
 gi|3881233|emb|CAA21707.1| C. elegans protein Y63D3A.4, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 362

 Score = 68.8 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 88/283 (31%), Gaps = 44/283 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +V ++SWNI+ L  +  ++               +    KN++ DI+FLQE+   +    
Sbjct: 119 EVSVMSWNIDGLDGRSLLT-----------RMKAVAHIVKNVNPDILFLQEVVDRDLAPI 167

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              ++ + I+YS +              +TAI V  K   V +           +     
Sbjct: 168 DKLQSLYKIYYSNKGC----------QYYTAILV-SKMFDVEKHDVIHFQNSGMY----- 211

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    L   I G K+++L+ HL+S              C+        +++ I Q     
Sbjct: 212 RTLQILEGSIGGLKVFLLNTHLESTREH------RPQRCAQFGFCMDKVREIIAQ--NPG 263

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDY 259
                 GD N +   +    D  K            K        +        K+  D 
Sbjct: 264 ALVFFGGDLNLRDEEVSRVPDGVKDAWEAAGSDNKTKFTWDTFKNDNKQGFHGAKMRFDR 323

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   K          L     I+S     SDH  I+  +
Sbjct: 324 LYWSGPLDK------VKFTLEGRQRIRSCLCFPSDHWAINATF 360


>gi|312866373|ref|ZP_07726591.1| exodeoxyribonuclease III [Streptococcus downei F0415]
 gi|311098067|gb|EFQ56293.1| exodeoxyribonuclease III [Streptococcus downei F0415]
          Length = 276

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 75/305 (24%), Gaps = 55/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  + R       +       DADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSR------QVIDSLVEQDADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   ++   ++   S  +     +       KN               S      R
Sbjct: 55  KHLALLEDYFPDYQIAWRSSVEPARKGYAGTMFLYKNSLPEPTITYPEIDAPSTMDDEGR 114

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +V  ++  +                  +     L            
Sbjct: 115 I-----ITLEFDKFFVTQVYTPNAGDGLRRLEERQIWDQKYADYLVGLDQ--------QK 161

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GD+N               R   +       +  +        F        N  
Sbjct: 162 PVLASGDYNVAHKEIDLANPTSNRRSPGFTDEERQGFTNLLDKGFTDTFRYMHGDIPNVY 221

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY++        + +    +    +           DH PI
Sbjct: 222 SWWAQRSKTSKINNTGWRIDYWLTSNRIADKISKSDMIDSGSRQ-----------DHGPI 270

Query: 299 SIDYD 303
            ++ D
Sbjct: 271 LLEID 275


>gi|325107028|ref|YP_004268096.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
 gi|324967296|gb|ADY58074.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
          Length = 367

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 88/290 (30%), Gaps = 44/290 (15%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            +P + +   +++       + S+  G+ +   ++K    D     +  +N   D++ L 
Sbjct: 83  FLPYSPAYGYEIK-----TRSESDPRGLQVAVANLKFDNPDKPACLEVLRNFQTDLLLLI 137

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+              W             +     +    +A+  K      +   L+ 
Sbjct: 138 EVNQE-----------WDDLLVDLHEDYPHRESVVMEEGLGLALYSKRPFKKTEVRYLIT 186

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                     R ++   VE++  ++        +   L   +N       L   +   + 
Sbjct: 187 --------ETRPSIFAEVELDNGEVLHFVGLHPAPPGLYDEKNGNRHDSRLRDGELMLVA 238

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + +    E    +++ GDFN            +K +            K      ++   
Sbjct: 239 EEVAD--EPNYSWLVTGDFNDVAWSHTTR--LFKRLS--GLKDPRVGRKLLTTYHSEYPP 292

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + PID+  + +NA   L              ++ R    SDH  + +D+
Sbjct: 293 LRYPIDHVFLTENARLGL--------------LERRYLPGSDHFGVVVDF 328


>gi|194228591|ref|XP_001494126.2| PREDICTED: similar to apurinic/apyrimidinic endonuclease 2 [Equus
           caballus]
          Length = 512

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 43/330 (13%), Positives = 85/330 (25%), Gaps = 70/330 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         + S     +    + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGVCEEPSNCTAMA----MGRVLDKLDADIVCLQETKVTRDVLTE 57

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +     +A  V         +          G  D 
Sbjct: 58  PLAIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATHNGDVGCYGNMDE 117

Query: 137 FSRAGNRR------AVELLVEING-----KKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           F++   R       A+    +I       K + +++++                  +   
Sbjct: 118 FTQEELRALDSEGRALLTQHKIRTSEGKEKTLTLINVYCPHADPG------KPERLAFKM 171

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDPN 231
           +  + L+        +    +I GD N                             +   
Sbjct: 172 RFYRLLQTRAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEDDPGRKWMDSLLSNP 231

Query: 232 D---------SLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQE 273
                      +  +   +  +  A                  +DY + D+         
Sbjct: 232 GCQAESHVGPFIDSYRCFQPKQEGAFTCWSVVSGARPLNYGCRLDYVLGDRTL------- 284

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               I   +          SDHCP+     
Sbjct: 285 ---VIDTFQASFLLPEVMGSDHCPVGAVLS 311


>gi|114608811|ref|XP_001151814.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral membrane
           (neutral sphingomyelinase) isoform 1 [Pan troglodytes]
          Length = 394

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 63/268 (23%), Gaps = 37/268 (13%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
              L  +      D+  L+E+ S      +  K +             +    +  I + 
Sbjct: 1   MRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLS--------PTYPAAHHFRSGIIGSG 52

Query: 114 IAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
           + V  K+       +                   +    L++ ++G  +     HL +  
Sbjct: 53  LCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGMVLNAYVTHLHA-- 110

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                        +    QA  L  +I    +     ++ GD N             K  
Sbjct: 111 ---EYNRRKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHP--EDLGCCLLKEW 165

Query: 229 DPNDSLIRFPKEKDSRCNANK--------------NLRNKIPIDYFVMDQNAYKFLIQES 274
                     ++       N                    + IDY +  +    F I   
Sbjct: 166 TGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQELKPFPFGVRIDYVLY-KAVSGFYISC- 223

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +          G  LSDH  +    
Sbjct: 224 -KSLETTTGFDPHSGTPLSDHEALMATL 250


>gi|296880312|ref|ZP_06904277.1| exodeoxyribonuclease III [Clostridium difficile NAP07]
 gi|296428755|gb|EFH14637.1| exodeoxyribonuclease III [Clostridium difficile NAP07]
          Length = 181

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 55/190 (28%), Gaps = 37/190 (19%)

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-- 196
           +   +    + +E + K+  V+ +  + F F+             L  + +W  D+I   
Sbjct: 2   KEPLKVMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYRTRWEDDFIDYL 61

Query: 197 QKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEK 241
            K ++  P ++ GD N                         + +  +  +  +  +    
Sbjct: 62  TKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKFSKLLDSGFIDTYRYFN 121

Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
             +         +           IDYF   +     LI       +             
Sbjct: 122 PDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLISADIHTEVL-----------G 170

Query: 293 SDHCPISIDY 302
           SDHCP+ ++ 
Sbjct: 171 SDHCPVELEI 180


>gi|32491120|ref|NP_871374.1| exonuclease III [Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis]
 gi|25166327|dbj|BAC24517.1| xthA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 267

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 90/314 (28%), Gaps = 80/314 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ VS+N+N +                   Y  +    + ++ +I+ LQE  + + +   
Sbjct: 1   MKFVSFNVNGIRSH----------------YDQVLLIIEKINPEIISLQETKVINESFPE 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+F ++ +  +                  H  +A   +    L       G K++F    
Sbjct: 45  KIFLQHGYKSYVH------------GQKQHHGVAFLTR----LNMKNIFTGFKNNFFNER 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +   ++     +++++I+  +                +     + L  ++ +  E 
Sbjct: 89  YR-VISSYIKTKIGNVYIINIYSPNG-----ESKKNLKKFEIKKIFYKSLFLFLNKFYEK 142

Query: 202 LVPFVIAGDFNRKINY----------------------LGNNDDFWKTIDPNDSLIRFPK 239
            +  +I GD N                               +   K        +   +
Sbjct: 143 NMHILIMGDMNISPEDLDVGLSLTSYKRWLSIGKCSFLPEEREWIKKIFK--WGFVDVFR 200

Query: 240 EKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             +           +           ID F+   +   ++ +      + + D       
Sbjct: 201 FLNPDKKKFSWFDYRSEGYIKNVGLRIDLFLSTFSLLSYIEESGMIYSIRSMDKT----- 255

Query: 291 RLSDHCPISIDYDF 304
             SDH PI I  +F
Sbjct: 256 --SDHVPIWIKLNF 267


>gi|226355160|ref|YP_002784900.1| exodeoxyribonuclease III [Deinococcus deserti VCD115]
 gi|226317150|gb|ACO45146.1| putative exodeoxyribonuclease III [Deinococcus deserti VCD115]
          Length = 260

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 80/303 (26%), Gaps = 81/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ + N+N L                 +    LR +      D++ LQE+ +   + + 
Sbjct: 12  LKVTTLNVNGLRS---------------ALRKGLRDWLLREAPDVLLLQEVRA-GPMPEA 55

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +   +   +   +          + +AV  ++     ++  L    D    A  R
Sbjct: 56  LQDLGYDGAWFPAQKAGY----------SGVAVLSRHPLRDIRAGMLHDEMD----AEGR 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++     + +  + ++L S    +  +              Q L D          
Sbjct: 102 VVSAVV-----QGVRFVSVYLPSGSSGELRQGFKDRILDDYHTWVQALLD-------EQT 149

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD--------------SRCNANK 249
           P VI GD+N     +   +      +                                  
Sbjct: 150 PVVIGGDYNIAHREIDLKNWRSNRKNSGFLPHEREWMTAHLSAGLVDCHRNCLGEAAEYT 209

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI-- 298
              N+           IDY ++        +                R  RLSDH P+  
Sbjct: 210 WWSNRGNAYANNVGWRIDY-LLSAGVQVRGVCV-------------DREARLSDHAPLTG 255

Query: 299 SID 301
            ++
Sbjct: 256 WVE 258


>gi|159036097|ref|YP_001535350.1| endonuclease/exonuclease/phosphatase [Salinispora arenicola
           CNS-205]
 gi|157914932|gb|ABV96359.1| Endonuclease/exonuclease/phosphatase [Salinispora arenicola
           CNS-205]
          Length = 1092

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/375 (8%), Positives = 72/375 (19%), Gaps = 103/375 (27%)

Query: 26  LVSWNINTLSEQEGVSLW--------------------KNSVKRTTSDYTLLRQYAKN-- 63
           + ++N+  L +                             S +      T L     N  
Sbjct: 610 VAAYNVENLYDFRDDPFDGCDFAGNDGCPGVRPPFNYVPGSEQEYQDQLTALADQITNDL 669

Query: 64  LDADIVFLQEMGSYNAV--------------AKVFPKNTWCIFYSTERLINHSKRDSN-- 107
              D++ +QE    +                A   P +   +  +       +   +   
Sbjct: 670 HSPDLILVQEAEDQDICTVEGAELVCGDTNDADGAPDSLQELALTITGNGGPAYAAAYDR 729

Query: 108 -----NDIHTAIAVRKKNVRVLQQSYPLL------------------------------- 131
                  I +A   R   V + + +                                   
Sbjct: 730 TGADNRGITSAFLYRTDRVALAEATADDPLLGSSPTVQYRAPGLPSNADVQNPKALNAVL 789

Query: 132 ------GAKDSFSRAGNRRAVELLVEINGKK-----IWVLDIHLKSFCFLDSLENTYSPS 180
                            R        +           +           D         
Sbjct: 790 PPDVDTSTGQDGDNVFTRAPQLGRFTMAAAPGSREGFTLWAASNHYSSGPDRRVGQRREQ 849

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWKTIDPN 231
            +  +     ++       +     V  GD N                 +D      +  
Sbjct: 850 AAYGAAIVSAIEA-----SDPDARVVFGGDLNVFPRPDDPIATAADPTPSDQLGPLYEAG 904

Query: 232 --DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN--EDDIKS 287
             +          S   +         +D+  + +  +  L+Q   + I  +   +    
Sbjct: 905 LRNLWDDLLAAAPSSAYSYSYAGQAQTLDHLFVTEALHDDLVQMRAAHINADWPAEYAGD 964

Query: 288 RGKRLSDHCPISIDY 302
             +  SDH P    +
Sbjct: 965 GSRGSSDHDPQVARF 979


>gi|330719278|ref|ZP_08313878.1| exonuclease III [Leuconostoc fallax KCTC 3537]
          Length = 271

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 85/306 (27%), Gaps = 61/306 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++ +SWNI++++        +  +         +      +  D++ +QE     + + K
Sbjct: 1   MKFISWNIDSINAAVEHKSNRGEMTW------AVLNEISEIAPDVLSIQETKLKASGLTK 54

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   +F      +N S   +    ++   +  K   +     P + A       G 
Sbjct: 55  KQLATLNSLFPDYHIFVNPS---TGRSGYSGTMMLSKVAPLNI-DMPKIDAPGEMDLEGR 110

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++ +   + +V  ++  +     +  N             Q L           
Sbjct: 111 ------IITLEFPEFYVSTVYTPNSGSQLARLNDRGAWDDAYRHYIQSLDQ--------Q 156

Query: 203 VPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P + +GDFN                         + +  +  +     F   + +   A
Sbjct: 157 KPVIFSGDFNVAHQEIDLKNPKSNRHSAGFTPEEREKFTNLLDSGFTDTFRYFEPTLTGA 216

Query: 248 NKNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                          +   IDY++  +   + L      +    +           DH P
Sbjct: 217 YTWWAQISKTSKINNSGWRIDYYLTSERLNERLKAHHILDTGARQ-----------DHAP 265

Query: 298 ISIDYD 303
           I ++ D
Sbjct: 266 IMLEID 271


>gi|309362229|emb|CAP28348.2| hypothetical protein CBG_08683 [Caenorhabditis briggsae AF16]
          Length = 320

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 86/345 (24%), Gaps = 67/345 (19%)

Query: 1   MIRKYVLALVFFL-------VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           M+ ++++ L   L          +      +RL+++NI              S K   + 
Sbjct: 1   MLPRFLVVLSILLQLVGSTYFTGSERSQNGIRLMTFNIW------------QSGKNVENG 48

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
              + ++   ++ DIV LQE  +                  T  L +       N  +  
Sbjct: 49  QQKIAKHILMVNPDIVALQETYANVTKNL------------TMMLGHPWVAVERNHEYPD 96

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-- 171
            A+  ++V V   +  L  +     +   R    +              +  +   ++  
Sbjct: 97  TAILTRHVIVPNTN--LSTSGGVGVKIMLRTGYMVHFWSLHLDYTSYGPYAANNKLVNRI 154

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFNRKINYL--------- 218
                   +      Q   +      K    K   VP  IAGDFN   +           
Sbjct: 155 DQILAGENTEYGRGPQIYEILTLPMMKKWMEKSDDVPIFIAGDFNGPSHLDWTEQTKKIH 214

Query: 219 -------------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                                  + +  +  N  +      K +          +  ID+
Sbjct: 215 GDWVIRWPATKELEDRGFTDTYREIYPNVLTNPGITWSTVNKFNPEWNYTIPEPQDRIDF 274

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      I                     SDH  +  DY F
Sbjct: 275 LFYKGPVVADQIMAYSGCEKPKRIPFHEHNDYPSDHFAVFADYTF 319


>gi|237737969|ref|ZP_04568450.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
 gi|229419849|gb|EEO34896.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
          Length = 274

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 94/306 (30%), Gaps = 38/306 (12%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +RK  + +++ L+  T    +   + S+N                + +   D+ L+ +  
Sbjct: 1   MRKLKILILYILMTLTLLAQEGY-IASFN-------------TLRIGKAQKDFKLMSKVL 46

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           +    D+V L E+ +   V ++  +            +  +    ++   + A   + + 
Sbjct: 47  EGF--DVVGLIEVMNPIGVERLIKELEKESGVRWEYHISPYPVGSTSYKEYFAYIWKSER 104

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              L         +    +   R       +I       + +         S+       
Sbjct: 105 AEFLGDRGFYPDDE----KKFERAPYGADFKIGNFDFTFVLV--------HSIFGKRESE 152

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
               +     + D+           +IAGDFN   +     + F   ++ +D ++     
Sbjct: 153 RRAEAFTMDRVYDYFQNLDSEENDIIIAGDFNLSADD----EAFENLLNHSDEVVHVLNP 208

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP--I 298
           +          +     D   + +   +    +S +     +     +  ++SDH P  I
Sbjct: 209 RIKTTIG--KDKLASSYDNMFLSKIYTQEFEGKSGAIDFTKKQYRMMKD-KISDHLPIFI 265

Query: 299 SIDYDF 304
            +D +F
Sbjct: 266 IVDTEF 271


>gi|197301959|ref|ZP_03167022.1| hypothetical protein RUMLAC_00689 [Ruminococcus lactaris ATCC
           29176]
 gi|197298907|gb|EDY33444.1| hypothetical protein RUMLAC_00689 [Ruminococcus lactaris ATCC
           29176]
          Length = 391

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 95/311 (30%), Gaps = 48/311 (15%)

Query: 27  VSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +++NI               G S W  S +          +   + D D   ++E+   +
Sbjct: 89  LTYNIGFGAYTPDFSFFMDGGKSSWAKSKESVKKTVQSAGELVASKDPDFALIEEVDLNS 148

Query: 79  AVAKVFPK--------NTWCIFYSTERLIN---HSKRDSNNDIHTAIAVRKKNVRVLQ-- 125
             +    +         ++   ++         +     +    + +A+  K        
Sbjct: 149 TRSYHVDEYSILKETIPSYNTVFAQNYDSAFLFYPLNQPHGKSRSGLALFSKYPVTDSLR 208

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           +S+P+  +   F       ++  +   NGK++ +  +H+ ++   D+          +  
Sbjct: 209 RSFPVSTSFSKFFDLDRCYSISRVPTDNGKELVIFLLHMSAYGNSDA----------IRE 258

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYL--------GNNDDFWKTIDPNDSLIR- 236
            Q + L   + ++ E+    +  GDFN  +                 +            
Sbjct: 259 GQIRMLSQDMQKEYEAGNYVLCGGDFNHDLKASNDDNDDAADYESWAYPFPREELPEHLS 318

Query: 237 FPKEKDSRCNANKNLRNKIPID--YF---VMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           F  ++ S    N    +    D  Y            F+I ++   + Y   +    G  
Sbjct: 319 FCIDQLSDTERNALWNSARNADMEYIPGETYTVTLDGFIISDNIECLQYENVNT---GYS 375

Query: 292 LSDHCPISIDY 302
            SDH P+ + +
Sbjct: 376 YSDHDPVYMKF 386


>gi|170760014|ref|YP_001787009.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169407003|gb|ACA55414.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 263

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 85/297 (28%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N +               ++       L +     + D++ LQE+        +
Sbjct: 1   MKILTLNCH-----------SWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKIL 49

Query: 84  FPKNTWCIFY------------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           F       F             +  +++        +     +A+  K+    + S+ + 
Sbjct: 50  FDNIKEDNFAFILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHSVKEKDSFYIS 109

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +KD       R+ ++  +    K I V   HL            +         QA  L
Sbjct: 110 KSKDKNFWKA-RKIIKCKIFYKNKPILVYSCHLGW----------WDDKEEDFKFQANKL 158

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + + Q        ++ GDFN          D+    +  D       + +         
Sbjct: 159 IEDLKQ----DETCILMGDFNNDAFLNYRGYDYLINKNFKDIYHLAKSKDNGVTVIGDID 214

Query: 252 RNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K       +D  + ++N      +  F+ I             +SDH  +    +
Sbjct: 215 GWKENTKNMRLDLILSNKNLKVEYCKVIFNGIRKEI---------ISDHFGVEAKIE 262


>gi|297678860|ref|XP_002817273.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Pongo abelii]
          Length = 423

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 74/298 (24%), Gaps = 46/298 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  +N+N         +   S  R       L  +      D+  L+E+ S      +
Sbjct: 9   LRI--FNLN------CWGIPYLSKHRAD-RMRRLGDFLNQESFDLALLEEVWSEQDFQYL 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFS 138
             K +             +    +  I + + V  K+       +               
Sbjct: 60  RQKLS--------PTYPAAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGD 111

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +    L++ ++G  +     HL +               +    QA  L  +I   
Sbjct: 112 WFSGKAVGLLVLHLSGMVLNAYVTHLHA-----EYNRQKDIYLAHRVAQAWELAQFIHHT 166

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--------- 249
            +     ++ GD N             K            ++       N          
Sbjct: 167 SKKADVVLLCGDLNMHP--EDLGCCLLKEWTGLRDAYLETRDFQGSEEGNTMVPKNCYVS 224

Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     + IDY +  +    F I      +     +    G  LSDH  +    
Sbjct: 225 QQELKLFPFGVRIDYVLY-KAVSGFYISC--KSLETTTGNDPYSGTPLSDHEALMATL 279


>gi|198417059|ref|XP_002129216.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 6
           [Ciona intestinalis]
          Length = 659

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/359 (9%), Positives = 92/359 (25%), Gaps = 81/359 (22%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++S+N+  +  + ++                 ++ +      ADI+ LQE+ +     
Sbjct: 185 FSVMSYNVLCDKYATRQLYGYCPPWALSWEYRRKIILREITYYSADILALQEVETCEYHN 244

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              P+     +       + +K  ++ D       AI  R + + ++++           
Sbjct: 245 FFLPELKLQGYDGIFNPKSRAKHMADEDKQHVDGCAIFWRTQKLSLVKEHLVEFNQVAMQ 304

Query: 138 SRAGNRRAVELLVEING-----------------KKIWVLDIHLKSFCFLDSLENTYSPS 180
           +  G+   +  ++  +                       +    +    +++  +     
Sbjct: 305 NNEGSEDMLNRVMTKDNIGIAALLETNDGLYDNSGGFPHIMSPKQHILAVNAHMHWDPEF 364

Query: 181 CSLLSQQAQWLKDWITQKKES------------------LVPFVIAGDFNRKINYLGNN- 221
             +   Q   L   + +  +                    +P V+ GDFN   +      
Sbjct: 365 SDVKLIQTVMLCHEVKRICDEANQSFRPGGRTTQSSDCHKMPLVLCGDFNSLPDSGVVEF 424

Query: 222 ----------------------DDFWKTIDPNDSLIRFPKEKDSRC-------------- 245
                                   F   +  N ++                         
Sbjct: 425 LRNGKVSSTHCDFKEIKYSKCLSTFGLGLRSNGTMQDPKSVTHPFRLNSCYDDTNFHLLQ 484

Query: 246 NANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISID 301
            +N     K  IDY    +       +        + +++I         SDH P+  +
Sbjct: 485 YSNNTYEFKGIIDYIFYSRTQMKCLGVLGGIDPEWFKQNNIVGCPHPHVPSDHIPVISE 543


>gi|152002960|gb|ABS19616.1| DNA lyase [Coccidioides immitis]
          Length = 625

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/349 (10%), Positives = 76/349 (21%), Gaps = 87/349 (24%)

Query: 23  KVRLVSWNINT------------LSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADI 68
            +RL +WN+N                 + +     S    R    +  +    +    DI
Sbjct: 2   PLRLTTWNVNGIRFGIRARLLCIYRTNDFLFRNPFSYQPWRENKSFERMFDILEG---DI 58

Query: 69  VFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR-------- 117
           +  QE  +   +    +     W  F+S       +S             +R        
Sbjct: 59  IVFQETKIQKRDLRDDMVLIPGWDCFFSLPRHKKGYSGVVIYTRCSACSPIRAEEGLTGT 118

Query: 118 -----KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
                             +G   +  +        + ++  G+ + +L+        +  
Sbjct: 119 LSSPGSPLPYRELPEDDQIGGYPTPEQLELLPIDPVTIDSEGRCV-ILEFPAFVLLGVYC 177

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------------- 216
             N         +     L   +          V+ GD N                    
Sbjct: 178 PANRDETRDVFRAAFLNVLDMRVRNLTAMGKRVVLMGDMNISREVIDSAHVIEAIRKGKT 237

Query: 217 ------YLGNNDDFWKTIDPND-----------SLIRFPKEKDSRCNANKNL-------- 251
                    +   F + +                L    K    R               
Sbjct: 238 TETEFLSSPSRRLFNQLVGGGGARAKDSEDTPVLLDVCRKFHPDRLGMYTCWEQRVNARP 297

Query: 252 -RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 IDY +   +   +  + +              G   SDHCP+ 
Sbjct: 298 GNYGARIDYVLCSVDMEDWFTESNIQ-----------EGLMGSDHCPVY 335


>gi|118467365|ref|YP_885746.1| endonuclease/exonuclease/phosphatase [Mycobacterium smegmatis str.
           MC2 155]
 gi|118168652|gb|ABK69548.1| endonuclease/exonuclease/phosphatase [Mycobacterium smegmatis str.
           MC2 155]
          Length = 249

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 74/303 (24%), Gaps = 84/303 (27%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---------SY 77
            ++NI              SV   + D   L      LD DI+ LQE+            
Sbjct: 2   ATFNILHGR----------SVHEGSVDLGKLGAAVAELDPDILGLQEVDLDQPRSGKADL 51

Query: 78  NAVAKVFPKNTWCIFYSTER------LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            AVA       +  F +          +  + R+        IA+  +      Q   L 
Sbjct: 52  TAVAAEAMGAVYHRFVAAISGTPGATWMAATGREQPGTAAYGIALLSRFPVENWQVVRLP 111

Query: 132 GAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                F                 R AV   ++     + V + HL      + +      
Sbjct: 112 RIPTRFPMYLSAVKRVQIVHEEPRAAVVARIDTPLGCMSVANTHLSFVPGWNRI------ 165

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                      L+  +   K    P ++ GD N               +           
Sbjct: 166 ----------QLRHLVRDLKGFPGPRLLMGDLNMGPGQPARWRALGSAL----------- 204

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                         +  +D+ +   +    +   S   +             +SDH  + 
Sbjct: 205 -------TFPADAPERQLDHVL-TDDHMLEVESCSAPCLP------------ISDHRALV 244

Query: 300 IDY 302
           +D 
Sbjct: 245 VDI 247


>gi|84393391|ref|ZP_00992150.1| Sphingomyelinase C precursor [Vibrio splendidus 12B01]
 gi|84376000|gb|EAP92889.1| Sphingomyelinase C precursor [Vibrio splendidus 12B01]
          Length = 467

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/297 (10%), Positives = 91/297 (30%), Gaps = 29/297 (9%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N+  L  + G+ +   +  +      LL   +   D D+V   E+    A   +   
Sbjct: 1   MNYNVYMLDHRLGIFVGGTNPNK---RAQLLANSSVFDDTDVVVFNEVFDNQASQILIDA 57

Query: 87  NTWCIFY-------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                 Y       +     +     S +     + +  K     +          +   
Sbjct: 58  LAQKFGYLTPVLGRTKSGWDHTEGWRSTSLDDGGVIIFSKYPIEYKSQVIFRDGCGADWA 117

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQK 198
           +  +  +  ++   G++  ++  H+++     S+  +      +   Q   +++++    
Sbjct: 118 S-QKGFIHTVINKGGERYNIIGTHVQADDDTCSIPPSI-----IRQDQFAQIENYVFGAN 171

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRN 253
           + +   F IAGD N   +                +                 +AN     
Sbjct: 172 RSADEMFFIAGDLNVAKDSQEFYSMLETLNVSEPTNYAGAPYSWDPAVNGLAHANYPDLK 231

Query: 254 KIPIDYFVMDQNAYKFLIQES------FSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +DY +++++  +     +         ++             SDH P++  +++
Sbjct: 232 GQLLDYVLVERSHKQPKNWHNQVLDIASKRVVLTGTQEPYYFYEYSDHFPVAA-FEY 287


>gi|302556290|ref|ZP_07308632.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302473908|gb|EFL37001.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 293

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 65/277 (23%), Gaps = 61/277 (22%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA----- 79
           R+++WN+                    SD              ++  QE    +      
Sbjct: 62  RVMTWNLCN--------------PCAVSDVDR-AAEIATYAPQVIGFQEACVRDVERIRD 106

Query: 80  -VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +  +        + +  R          N      AV          +           
Sbjct: 107 YLRNLHGLVYHVEYGTVLRNWGRCGGLPWNPGGFGQAVLSAAPMTEPVNVEYPDGG---- 162

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            + +R  + +   + G+ + V + HL                 ++ + QA  L   + + 
Sbjct: 163 -SEDRGYMAVTTTVGGRPVRVFNTHL-----------AQRRQEAVRADQAGVLAGEVARH 210

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    ++ GDFN   +        W      D            C    + +     D
Sbjct: 211 DRA----IVLGDFNAVPD-APELRPIWALATDTDPQCHPS--PTGTCQPTTDWQ--SKFD 261

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           Y  +       ++                     SDH
Sbjct: 262 YVFLRG-----IVPLRHRVHPSP----------YSDH 283


>gi|194364073|ref|YP_002026683.1| exodeoxyribonuclease III Xth [Stenotrophomonas maltophilia R551-3]
 gi|194346877|gb|ACF50000.1| exodeoxyribonuclease III Xth [Stenotrophomonas maltophilia R551-3]
          Length = 266

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 82/316 (25%), Gaps = 87/316 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R++S+N N +                 +       + +  DAD++ +QE          
Sbjct: 1   MRIISFNANGIRS---------------AATKGFLDWFRAQDADVLCIQETKAQEDQLTD 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F  +    FY         +       ++ +A+  K       +       D   R  
Sbjct: 46  PMFRPDGHHCFY---------RDAITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRY- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +E     + V+  ++ S    D  +              +WL+  + +   S
Sbjct: 96  --------IEARYGNLSVVSFYIPSGSSGDLRQGFKFEV-------MEWLRPILEEWARS 140

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKD--- 242
              +V+ GD+N   +                     D        +         +    
Sbjct: 141 GRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPEERDWLNALCADHGQATDVATGRGWAD 200

Query: 243 ------SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                           N+           IDY  +       L   S             
Sbjct: 201 AYRLLNPTGEDYTWWSNRGAARANNVGWRIDYQFITPGLRDRLRSCSI-----------Y 249

Query: 288 RGKRLSDHCPISIDYD 303
           R +R SDH P  +DYD
Sbjct: 250 RDERFSDHAPFIVDYD 265


>gi|114660659|ref|XP_001168149.1| PREDICTED: deoxyribonuclease I isoform 2 [Pan troglodytes]
          Length = 276

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 74/274 (27%), Gaps = 32/274 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E               +  + + Q       DI  +QE+   +  AV
Sbjct: 22  SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 70

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+          +   +++     ++         R   V  +   Y   G +   +  
Sbjct: 71  GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDT 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            NR    +       ++    I        D++    +     L  Q +W          
Sbjct: 131 FNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW---------- 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            L   ++ GDFN   +Y+  +      +  + +      +         +       D  
Sbjct: 181 GLEDVMLMGDFNAGCSYVRPSQWSSIRLRTSPAFQWLIPDSADTTATPTHCAY----DRI 236

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           V+     +                       LSD
Sbjct: 237 VVAGMLLQ-----GAVVPDSALPFNFQAAYGLSD 265


>gi|330843681|ref|XP_003293776.1| hypothetical protein DICPUDRAFT_9650 [Dictyostelium purpureum]
 gi|325075853|gb|EGC29694.1| hypothetical protein DICPUDRAFT_9650 [Dictyostelium purpureum]
          Length = 249

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 75/300 (25%), Gaps = 76/300 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           ++++SWN+                            Y    + DI+ LQE       V K
Sbjct: 1   LKVISWNVAGFRSVLTKGF---------------SDYVVKENPDILCLQETKIKPTEVQK 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               + +   + +     H              +  K   +  +    +   D+  R   
Sbjct: 46  SSIPSGYEYHFVSADQAGHHGTG----------LLTKLKPLSLKFGIGIAKHDTEGR--- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++       ++++ ++ +          Y      +  Q ++L +      +  
Sbjct: 93  ------VITAEYDDFYLVNTYIPNSGSRGLKNLDYRIKEWDVDFQ-KYLVEL-----DKK 140

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNA 247
            P V  GD N     +   +                 +        +  +      +  A
Sbjct: 141 KPVVWCGDLNVAHTEIDLKNPKTNTKSAGFTIQERTSFGDFLNKGFIDSYRHYNPGKEGA 200

Query: 248 NKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             +DYFV+ +     +        +             SDHCPI
Sbjct: 201 FTFWTYMGGARAKNVGWRLDYFVVSKRYIDSIKTPFIRSTV-----------MGSDHCPI 249


>gi|171778868|ref|ZP_02919930.1| hypothetical protein STRINF_00789 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282514|gb|EDT47938.1| hypothetical protein STRINF_00789 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 271

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 88/300 (29%), Gaps = 51/300 (17%)

Query: 25  RLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ----------- 72
           + ++ N +  L       L+  +      +Y ++    + ++ DI  L            
Sbjct: 3   KFLTLNTHSWLEANSLKKLFDLAENIYIENYDVIC--LQEINQDIRGLAAKDVEGYEKLP 60

Query: 73  ---EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
              E+   N   ++         +              +  +  + +  KN    +    
Sbjct: 61  GSPELHCDNYALQLVNYLKSQGRHYYWSWA--YNHIGYDKYNEGVVILSKNPI--KVKDI 116

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           L+   D       RR +    E++GK + V+ +H+  F      E              +
Sbjct: 117 LVSEVDDEHDYHTRRVLAAETEVDGKPVTVVSLHMSWFGKGFESEWAKLE---------K 167

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---N 246
            L D+         P V+ GDFN   +  G +      ++  DS       +       +
Sbjct: 168 ALSDF-------PKPLVLMGDFNNPTDTAGYDMILNSPLELQDSHKVAKSIQGDHTIIED 220

Query: 247 ANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +    NK  +  D+    +                           +SDH  +++D ++
Sbjct: 221 IDGWEGNKQSLKVDHVFTSKE---------IEIQSSTVVFDGGESPIVSDHFGLAVDLNY 271


>gi|71999722|ref|NP_001023607.1| CCR (yeast CCR4/NOT complex component) homolog family member
           (ccr-4) [Caenorhabditis elegans]
 gi|22859087|emb|CAB54512.2| C. elegans protein ZC518.3b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 613

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 96/351 (27%), Gaps = 74/351 (21%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  +     S   +          L+ +  +  +AD++ LQE+ +    
Sbjct: 226 TFTVLCYNVLCDKYATVNQYSYCPSWALNWEYRKGLIIKEIRTYEADVITLQEVETEQFR 285

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLL------- 131
               P+     +       + +K     +       A+  K  +       L        
Sbjct: 286 TLFQPELKQLGYAGIFEAKSRAKTMGEEERKYVDGCAIFWKVDKFDMDKQYLFEFSSVAM 345

Query: 132 ----GAKDSFSRAGNR--RAVELLVEIN---------------------GKKIWVLDIHL 164
                +++  +R   R    +  +++I                      G  + V   H+
Sbjct: 346 KKASTSENMLNRVMPRDNIGLCAVLKIKESVYANKFLGRMQIPMNDNVVGNPLVVATAHI 405

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT---QKKESLVPFVIAGDFNRKINYL--- 218
                     +       +L+ +   + + ++   Q  +  VP +I GDFN   +     
Sbjct: 406 HW---DPEFCDVKLVQSMMLTHEVSRVLEEVSKKYQITQQQVPVLICGDFNSLPDSGVFE 462

Query: 219 -------GNNDDFWKTIDPNDSLIRFPKEKDSRC-----------------NANKNLRNK 254
                         K+   +  L +F    D                      N  L  K
Sbjct: 463 YLSKGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYTLDFK 522

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDD---IKSRGKRLSDHCPISIDY 302
             IDY      +   L      +  + + +           SDH PI   Y
Sbjct: 523 GMIDYIFATPQSLARLGILGPFDPQWVQSNKILGFPHPHVASDHIPIMAQY 573


>gi|55820291|ref|YP_138733.1| hypothetical protein stu0193 [Streptococcus thermophilus LMG 18311]
 gi|55736276|gb|AAV59918.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
          Length = 290

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 74/280 (26%), Gaps = 54/280 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +     +  L++       DI+  QE+      A V     + +  S             
Sbjct: 34  EDAEGKFQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHVLPSATSIHQDHFVRLL 93

Query: 96  ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 + ++  +AV  +      +   L+   D  +    RR 
Sbjct: 94  VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASE--ILVSDVDDPTDYHTRRV 151

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                 ++G+++ V  IHL  +      E                      + +    P 
Sbjct: 152 AVAETTVDGREVAVASIHLSWWDKGFQEEWARIE----------------ERFQSIGKPI 195

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260
           ++AGDFN      G        +   DS     K   S       +  K     + IDY 
Sbjct: 196 ILAGDFNNPAGREGYQTILASPLKLQDSFQVAQKTNGSYTVGPGIDGWKGNEEPLRIDYV 255

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              Q          ++    +     +    +SDH  +  
Sbjct: 256 FASQE---------WAVNRLSVIFDGNNQSLVSDHYGLEA 286


>gi|114660665|ref|XP_001168120.1| PREDICTED: similar to deoxyribonuclease I precursor isoform 1 [Pan
           troglodytes]
          Length = 273

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 74/274 (27%), Gaps = 32/274 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AV 80
            +++ ++NI T  E               +  + + Q       DI  +QE+   +  AV
Sbjct: 19  SLKIAAFNIQTFGET---------KMSNATLVSYIVQILSRY--DIALVQEVRDSHLTAV 67

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+          +   +++     ++         R   V  +   Y   G +   +  
Sbjct: 68  GKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDT 127

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            NR    +       ++    I        D++    +     L  Q +W          
Sbjct: 128 FNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW---------- 177

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            L   ++ GDFN   +Y+  +      +  + +      +         +       D  
Sbjct: 178 GLEDVMLMGDFNAGCSYVRPSQWSSIRLRTSPAFQWLIPDSADTTATPTHCAY----DRI 233

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           V+     +                       LSD
Sbjct: 234 VVAGMLLQ-----GAVVPDSALPFNFQAAYGLSD 262


>gi|50539874|ref|NP_001002403.1| deoxyribonuclease I-like 3, like [Danio rerio]
 gi|49902939|gb|AAH76179.1| Deoxyribonuclease I-like 3, like [Danio rerio]
 gi|220679244|emb|CAX14380.1| deoxyribonuclease I-like 3, like [Danio rerio]
          Length = 292

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 94/309 (30%), Gaps = 36/309 (11%)

Query: 1   MIRKYVLALVFFLV-PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           M    +L  +   +  C  S    +++ ++NI           +  +    T    +L +
Sbjct: 1   MRPPLLLCFIGLCLWTCVIS----LKICAFNIQ---------SYGEAKASNTRVMEILTK 47

Query: 60  YAKNLDADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                  D+  +QE+      A++ +               +   +          + + 
Sbjct: 48  IISRC--DLSLIQEVRDSRGEAISALLMSLNRFDKSHIYAHLESKRLGKKTYKEQYVYIY 105

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +K++  +Q+ Y      +S S   +R    +LV      +    +  +      +     
Sbjct: 106 RKDMLQVQEQYEHPEVNESASEVFSREPFIILVHSPTTLVKNFVLIGQHTSPKSA----- 160

Query: 178 SPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                   ++   L +     K+       +  GD N   NY+ N       +  +    
Sbjct: 161 -------MKEMDSLYEVFQTVKKKWKTENVMFLGDLNAACNYVTNKGLRNVRLRSDPKFH 213

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--S 293
              +++       K       I   +  +     ++ ES     + ++   S  + L  S
Sbjct: 214 WLIRDEQDTTVREKTRCAYDRI--IIHGKELISGIVPESAQPFNFKQEFNLSEEEALEVS 271

Query: 294 DHCPISIDY 302
           DH P+ +D 
Sbjct: 272 DHFPVEVDL 280


>gi|221369426|ref|YP_002520522.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131]
 gi|221162478|gb|ACM03449.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131]
          Length = 255

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 75/302 (24%), Gaps = 71/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++N+N ++                    +L ++ + +  D+  LQE          
Sbjct: 1   MRIATFNVNGVNG----------------RLPVLLRWLEEVRPDVACLQE---------- 34

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               +     +      +            +A+  +    ++    L G +D      +R
Sbjct: 35  LKAASARFPAAALEAAGYGAVWHGQKSWNGVAILARGAEPVRTRQDLPGVQDG----ESR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +     + + V  +++ +       +     +          L +   +     V
Sbjct: 91  YIEAAV-----QGVLVGCLYMPNGNPAPGPKFAAKLA------WFDHLLNHAEELLRHDV 139

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+AGDFN     L  +                  +  +                    
Sbjct: 140 PVVLAGDFNVMPTDLDVHRPERWREDALFRPEARAAFARLLTQGWTDAVRHLHPEDRIYT 199

Query: 249 KNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                +          +D+                       D      ++ SDH P  I
Sbjct: 200 FWDYLRNAWERDAGLRLDH-------LLLSPSLLPRLKKAGVDRHVRGWEKASDHAPAWI 252

Query: 301 DY 302
           + 
Sbjct: 253 EI 254


>gi|189236489|ref|XP_975064.2| PREDICTED: similar to neutral Sphingomyelinase, putative [Tribolium
           castaneum]
 gi|270005347|gb|EFA01795.1| hypothetical protein TcasGA2_TC007396 [Tribolium castaneum]
          Length = 393

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 78/297 (26%), Gaps = 41/297 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           + ++ + N   L+                     + +       D+V LQE+        
Sbjct: 2   EFKVFTLNCWGLAVVSKNR---------RHRMQAIAEKLATSQYDVVCLQEIW------- 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-----DSF 137
               +   I      ++ +S    +    + + +  ++       +              
Sbjct: 46  -LDSDYQLIRNKVSGVLPYSHYFYSGVTGSGVCILSRHPMEDVFFHQWPVNGYIHKIHHG 104

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              G +      +++N   + V   HL +       +       +    Q+     +I  
Sbjct: 105 DWFGGKGVGLCKLKVNNYTVNVYSAHLHA-----EYDRNCDEYQAHRVLQSFDTAQFIQM 159

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDF------WKTIDPNDSLIRFPKEKDSRCNANK-- 249
                   V+AGD N +   L                +  +++       +S  N+    
Sbjct: 160 TSGDADLVVLAGDLNTEPGDLAYRIMLSVPGLVDAFGEAGETVQNCVATNESLTNSYTPV 219

Query: 250 ----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      IDY +    +   +  +S+   L     I       SDH  I+   
Sbjct: 220 ALLKKNIPGKRIDYIMYHPGSSLQIDLKSY--TLPLPHKIPGCAYSYSDHEAIAATL 274


>gi|170071075|ref|XP_001869804.1| 2-phosphodiesterase [Culex quinquefasciatus]
 gi|167867026|gb|EDS30409.1| 2-phosphodiesterase [Culex quinquefasciatus]
          Length = 586

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 81/329 (24%), Gaps = 52/329 (15%)

Query: 23  KVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           + R+V++NI          S  E      N          L  +     +ADIV LQE+ 
Sbjct: 258 QFRVVTYNILADLYADSDYSRTELFGYCPNYALHIDYRKQLFIKEILGYNADIVCLQEVD 317

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL---- 131
                 KV+  +   +F       ++  +    +         +   + +Q         
Sbjct: 318 G-----KVYDLDLLPVFKVKNFDGHYKAKGKTAEGLATFFDCSRFEVLDRQGITFGENLE 372

Query: 132 ---GAKDSFSRAGNRRAVELLVEINGKKI-------------WVLDIHLKSFCFLDSLEN 175
                +  +++  +   +   ++     I              +L  +   +   D+   
Sbjct: 373 TLEPFQGLWNQIKSNEKLASRIKDRSTAIQATLLRSRQNPAKHLLVANTHFYFHPDADHI 432

Query: 176 TYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKIN------------YLGNN 221
                   +       + +  Q     +    V  GDFN                     
Sbjct: 433 RLLQGGLSMLYVRDLYERFEAQYGLNRNHFAIVFCGDFNSTPECGMFRLMTQRFVGTEMA 492

Query: 222 DDFWKTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESF 275
           D      +    +             +    N  +  K  IDY            +    
Sbjct: 493 DWQSNEEEAVRGVSLAQPFPFQSACGTPKYTNFTVGFKACIDYIYYQCDALRVNDVVPLP 552

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           SE      D        SDH  +    ++
Sbjct: 553 SEDELTAYDAIPSPVFPSDHVALVASLEW 581


>gi|37523648|ref|NP_927025.1| hypothetical protein gll4079 [Gloeobacter violaceus PCC 7421]
 gi|35214653|dbj|BAC92020.1| gll4079 [Gloeobacter violaceus PCC 7421]
          Length = 278

 Score = 68.8 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 77/284 (27%), Gaps = 49/284 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + ++++SWN+                              +    DIVFLQE+      
Sbjct: 39  GEALKILSWNV-------------AKSNHDRRFTREFLSILEREQPDIVFLQEVRVDAET 85

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +           +      H    S        A   + V +   + PL G        
Sbjct: 86  MRAVDLAGMHWSVAPNYKDTHLNAYSGLLTAARPAPIGQRVVLTHDTEPLAGT------- 138

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             + ++     + G+   +L I+     F+D               Q + L+   ++ + 
Sbjct: 139 -PKASLLTEYPLPGRSRKLLAINSHLINFVD---------LPSFGAQLRQLEAIASRHRG 188

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P V+AGDFN    +     +  + I     L        +     K      P+D  
Sbjct: 189 ---PMVLAGDFN---TWNAPRVELLEEIARRLGLKAVT-FAPADRWLVKRFLLSAPLDNI 241

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                + K                        SDH PI  +  +
Sbjct: 242 FFRGLSEKANATRVLRRTTC------------SDHRPILTELTW 273


>gi|213964132|ref|ZP_03392371.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sputigena Capno]
 gi|213953225|gb|EEB64568.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sputigena Capno]
          Length = 253

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 81/290 (27%), Gaps = 51/290 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ +WN+                K T      + +  + L+AD++ L E  +  ++ ++ 
Sbjct: 3   KIATWNVE------------RPKKGTQKTALAIVK-IEELNADVLVLTENATSISLTEL- 48

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                           HS           +++  K     Q            +    R 
Sbjct: 49  -----------YPFSVHSLSYERTPEEHWVSIFSKWQITEQ----------IQTFDNYRT 87

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK----DWITQKKE 200
           A   +++     I V    +       S     +          + L     DW    K+
Sbjct: 88  A-CAVIKSPFGDITVFGTIIPYHQAGVSGIKYGNLGYKQWEYHEKDLHQQAKDWERITKK 146

Query: 201 SLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN----- 253
           +  P  + GDFN+          +   + +      +      +   +   +        
Sbjct: 147 TQNPLWVMGDFNQSRYNHQGYGTEKVRQLLSDYLKKLNLTCVTEGDLSPFLHPDPIKNKI 206

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  ID+  +  +    +            D     GK +SDH  + I ++
Sbjct: 207 RNNIDHICISNSFMLKMKAYQVGAW----DHFNEEGKYMSDHNGVFISFE 252


>gi|116251825|ref|YP_767663.1| hypothetical protein RL2065 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256473|emb|CAK07557.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 267

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 70/306 (22%), Gaps = 67/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +R++S N                          L +Y    D D++ LQE+         
Sbjct: 1   MRIISLNAWGGRLH-----------------EALIEYVTAADPDVLCLQEVLRAPGTRSG 43

Query: 75  ------GSYNAVAKVF-------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----- 116
                 G    + +                F+           D+       +A      
Sbjct: 44  SSVYRDGDVELLQRFNLFTEISTALPGHDGFFCPTSRGELFDGDTVIVAEFGLATFVHKT 103

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                + L   +    A         R A  + +  +     V   H+         +  
Sbjct: 104 HSVIAQGLDFVHGSFSADGWGEHPRPRNAHCIRLFSHEHASTVTIAHMH-----GLRDPA 158

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                +   +QA  L   I +        ++ GDFN   +        +  +        
Sbjct: 159 GKGDTAAREKQAAALVGLIERVWPGDEGLIVCGDFNVLPDS-----ATFAILGRLGLSDL 213

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                      +  L+     DY ++                 +           +SDH 
Sbjct: 214 VTGSGLVDTRTSYYLKQGRFADYMLVTP---------GVKVAKFEVVKAPE----VSDHR 260

Query: 297 PISIDY 302
            + +D 
Sbjct: 261 ALLLDI 266


>gi|321466080|gb|EFX77077.1| hypothetical protein DAPPUDRAFT_305861 [Daphnia pulex]
          Length = 358

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 86/300 (28%), Gaps = 48/300 (16%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L   T     + R++SWNI+ L         +N   RT S    + +  +  + D+VFL
Sbjct: 97  LLDTATTKPPSEFRMISWNIDGLD-------DRNLKMRTKS----VVKIIQTHNPDVVFL 145

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+     +  +        F        +        +     +   +  ++       
Sbjct: 146 QEVI-PKTLDYLENNLPQFKFI-----PGNVDGYFTVTMLNMFTIHYDSHEII------- 192

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              D  +    R  +++   +   K+ +L+ H++S                    Q   +
Sbjct: 193 ---DFPATTMGRNLLKVEAHMGPLKLKLLNTHMESTG----------EHADERMNQLN-I 238

Query: 192 KDWITQKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                 + +  V  ++ GD N +               D W+                + 
Sbjct: 239 SFHELSRTDKSVNVIMGGDLNMRDKELATVGGLPDLTYDLWEACGSRKECQWTWDITRNT 298

Query: 245 CNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   + +   D   +        + + F  I   +  I       SDH  +  D+D
Sbjct: 299 NKDFPGKFKPRCRFDRIYLRPATSTSAVPKFFGLIGLQK--ISGYQCFPSDHWGLLADFD 356


>gi|49474838|ref|YP_032879.1| hypothetical protein BH00070 [Bartonella henselae str. Houston-1]
 gi|49237643|emb|CAF26823.1| hypothetical protein BH00070 [Bartonella henselae str. Houston-1]
          Length = 293

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 77/281 (27%), Gaps = 51/281 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + S+N++     + V                + Q    L  DI+ LQE         
Sbjct: 54  DLTVASYNVHKCIGVDKVFNPT-----------RIVQVITELQVDILALQEADKRFGERI 102

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    +  +    +       A+       L++ +     + +      
Sbjct: 103 GLIDLQLLKAETGLIPVPLNTMSPHGHGWHGNAL------FLRKGHVCDTLQITLPGIEP 156

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV   +E+    I V+  H                     +QQ + L   +   K  L
Sbjct: 157 RGAVIADLEMEVGPIRVIAAHFGLLRHS-------------RNQQTKMLLSLLQ--KRPL 201

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GDFN         +         +    +         +  +    + +D  + 
Sbjct: 202 MPTLLIGDFN---------EWRIGKGSSLNHFAPYFDSTVGTVPSFPSRFPLLALDRILA 252

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +            ++  E+      +  SDH PI    D
Sbjct: 253 FPH----------QLVIRIENHHSPLARIASDHLPIKAYLD 283


>gi|270005856|gb|EFA02304.1| hypothetical protein TcasGA2_TC007970 [Tribolium castaneum]
          Length = 505

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/237 (10%), Positives = 66/237 (27%), Gaps = 14/237 (5%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLW----KNSVKRTTSDYTLLRQYAKNLDADIVF 70
           P  AS      ++++N+                +    +  + +  L    +NL+ DI+ 
Sbjct: 132 PNNASSGFVFSVMTYNVLAQDLVNQHPYLYALHRKDSLKWDTRWNNLLAEIRNLNPDILC 191

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ + +          +    +      + +R        AI  +   + +L+     
Sbjct: 192 LQEVQNTHL------DQYFSTLDTLGYQGLYKQRTGPRTDGCAIYYKPHLLTLLEHETVE 245

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                +     +  A+        +      +      +    ++       LL  +   
Sbjct: 246 YNQPTTRLLDRDNVAIIAKFASKSRPSHPFVVATTHLLYNPKRQDVRLAQTQLLLAEI-- 303

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             D I     + +P ++ GD N   +           +   D  +       +    
Sbjct: 304 --DRIAFNSSTYLPVILTGDLNSTPDSALYKFISSGFLRREDLALIRSPRSQTGFYG 358


>gi|224025826|ref|ZP_03644192.1| hypothetical protein BACCOPRO_02568 [Bacteroides coprophilus DSM
           18228]
 gi|224019062|gb|EEF77060.1| hypothetical protein BACCOPRO_02568 [Bacteroides coprophilus DSM
           18228]
          Length = 311

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/344 (11%), Positives = 95/344 (27%), Gaps = 77/344 (22%)

Query: 2   IRKYVLALVFFLVPCTASVA-------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           ++K +L L  F +    +           ++++SWNI                       
Sbjct: 1   MKKCILTLGLFALTFMGTSCTKEVQKDNTLKVLSWNIWHEGHSNKYG---------KQAC 51

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             +    K  +AD++ + E  +Y A  KV     +                    + + +
Sbjct: 52  DGVIGVLKKSEADVILMIE--TYGASDKVADSLGYYH----------------RLLSSNL 93

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           ++  +   V   ++P   +  +F          + + ++GKK+ + D  L        + 
Sbjct: 94  SIYSRYPIVKTYTFPDQISTFNFGG--------VEILMHGKKVRIFDTWLHYLPDARCVP 145

Query: 175 NTYSPSCS-------LLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNND--- 222
              S +             + + +   +          P ++ GDFN   +         
Sbjct: 146 TEKSEAEILAWDDAGTRDDEIRTIISILKPFIAESDSIPMIMGGDFNIHSHLDWTEATKN 205

Query: 223 -----------DFWKTIDPNDSLIRFPKEKDSR-----------CNANKNLRNKIPIDYF 260
                         K+++    +  F +                 ++ +    +  IDY 
Sbjct: 206 LYNHGGAVVNWTVSKSMEEAGFIDSFREVNPDPVKNIGTTWLTAADSLETPNRQDRIDYI 265

Query: 261 VM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +       Q   + +              SDH  +  ++ 
Sbjct: 266 YYQGKTIKATASQCYDNYLGKQFQFEGEPFFYGSDHGFVLTEFS 309


>gi|255945069|ref|XP_002563302.1| Pc20g07790 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588037|emb|CAP86108.1| Pc20g07790 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 655

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/360 (12%), Positives = 75/360 (20%), Gaps = 100/360 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
            R+ +WN+N +        W     R T  +  +      L+ADIV LQE  +   +   
Sbjct: 3   FRITTWNVNGIRNPFSYEPW-----RGTRTFESM---FDTLEADIVILQETKIQRKDLRD 54

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +     W  ++S       +S         T   +R +         P           
Sbjct: 55  DMVLVPGWDCYFSLPRVKKGYSGVVIYTRNATCSPIRAEEGITGVLCPPKSPTSFRSLPE 114

Query: 141 GN------------RRAV------------------ELLVEIN--GKKIWVLDIHLKSFC 168
                         R A+                  +  ++      +   + +   +F 
Sbjct: 115 EQQIGGYPTSDQLYRPAMNPEGPDPEEEQDDVGSVPDATIDAPTLDSEGRCVILEFPAFV 174

Query: 169 FLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---------- 216
            +      Y               L   I          V+AGD N              
Sbjct: 175 LIGVYCPAYRDESRDTFRMDFLNALDARIRNLTAMGKNVVVAGDINISKQGIDAAHGIEA 234

Query: 217 ------------YLGNNDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNL 251
                              F   +                  L         R       
Sbjct: 235 IRKGTTTEEEFISAPPRRLFNHLMSDGVVIGERDKGREDPVLLDLCRSFHPHRTGMYTCW 294

Query: 252 R---------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         IDY +   +   +    +              G   SDHCP+    
Sbjct: 295 DQKLNARPGNYGSRIDYVLCSLHMQDWFSDSNIQ-----------EGLMGSDHCPVYAVI 343


>gi|159185235|ref|NP_355433.2| hypothetical protein Atu2485 [Agrobacterium tumefaciens str. C58]
 gi|159140497|gb|AAK88218.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 281

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 77/278 (27%), Gaps = 53/278 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + S+N++    ++              D     +  + + ADI+ LQE  S         
Sbjct: 49  IASYNVHKCVGRDRKF-----------DPDRTSRVIQEIGADIIALQEADSRFGERTGLL 97

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   S    +        +  H  + + ++       +  L G          R A
Sbjct: 98  DLARLERESGLVPVPVQAGVKAHGWHGNVVLFREGAVRDVHTLKLPGL-------EPRGA 150

Query: 146 VELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           + + +++ +G  + V+  H                     +QQA+ L   +     +   
Sbjct: 151 LVVELDLKSGGTLRVIAAHFGLLRHS-------------RAQQAKALVGLLE--ARNECA 195

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GD N         +         ++             +  +    + +D  + ++
Sbjct: 196 TILMGDLN---------EWRLGNGSSLNTFRDAFGTLPPAVPSFPSNLPVLALDRIIANR 246

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +          E    +  +  SDH P+    
Sbjct: 247 EGLIEQV----------EAHDSALARIASDHLPLKAAI 274


>gi|324511094|gb|ADY44630.1| 5'-tyrosyl-DNA phosphodiesterase [Ascaris suum]
          Length = 322

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 52/288 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
               ++SWN++ L                 + +T +      + A+ VFLQE+       
Sbjct: 79  DAFTVLSWNVDGLD-----------KGNLKTRFTAICYIISKVSAEAVFLQELAPELVPE 127

Query: 82  -KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +      + I  ST                T I ++     +  +  P   +       
Sbjct: 128 LRRNLGGEYSILLSTPSQP----------YFTGILLKPNVEYISHKCIPYANSG------ 171

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R    +  +I    + +L+ HL+S             S  +   Q Q     + +  +
Sbjct: 172 MGRAMELVEAKIGNMDVRLLNTHLESM----------KESSEIRKSQLQQCFTQLKEWND 221

Query: 201 SLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                V  GD N + N +G       +       +P        +  D      +    +
Sbjct: 222 GRTLIVFGGDLNIRDNEVGELPEGFLDAWVAAGSNPKCRFTWDTRLND----NKQAGGAR 277

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              D    +       +  SF      +D I+      SDH  I    
Sbjct: 278 CRFDRLFFNGGGVFSSVDFSFE----GQDRIRRTLCFPSDHWAIVAKI 321


>gi|291536334|emb|CBL09446.1| exodeoxyribonuclease III [Roseburia intestinalis M50/1]
          Length = 246

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 48/180 (26%), Gaps = 37/180 (20%)

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVI 207
           +E + K+  V+ +    F  +           + L  + QW  D+    ++ +   P ++
Sbjct: 76  IEEHDKEGRVITLEYPDFYMVTCYTPNSQNELARLPYRMQWEDDFRAYLKRLDGSKPVIL 135

Query: 208 AGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
            GD N                         +    +        F               
Sbjct: 136 CGDLNVAHEEIDLKNPKTNRKNAGFSDEEREKMTKLLDAGFTDTFRYFYPDTEQIYSWWS 195

Query: 253 NK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +           IDYF+  +     L        ++            SDHCP+ +D D
Sbjct: 196 YRFRAREKNAGWRIDYFITSKRMNDKLTGAKIHTDVF-----------GSDHCPVELDID 244


>gi|241889785|ref|ZP_04777083.1| metal-dependent hydrolase [Gemella haemolysans ATCC 10379]
 gi|241863407|gb|EER67791.1| metal-dependent hydrolase [Gemella haemolysans ATCC 10379]
          Length = 264

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 82/297 (27%), Gaps = 54/297 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76
           ++L++ N++  L E                   +L +     + D+V +QE+        
Sbjct: 1   MKLLTINVHSWLEEN------------QLEKLNILAKVIVEKNYDVVAMQEVNQLINSED 48

Query: 77  ------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                  +   K+                        +     +A+  K   V  + +  
Sbjct: 49  VQQGIKTDNFGKLLLDKIREYGEEGYSYYWTYSHIGFDKFEEGLAILAKGEVVAVEDF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             A+ + +   +R+ +++ +++N + +     H+          +               
Sbjct: 108 CTAQQTVTSIESRKILKVDLKVNNEIVEFYSCHMNLPTCKGEDIDQN------------- 154

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY--LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           L + I       +     GDFN    +          K +     L        +     
Sbjct: 155 LSNLINYTDNKNLKVF-MGDFNTDYFHQVDDYKRILDKGLYDTYELAEKKDGGVTVYKNI 213

Query: 249 KNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +    +DY  +++          F++  Y           +SDH  + +  
Sbjct: 214 SGWEDSMCQKKLDYVFINRKLDVKESFVIFNDDNYPI---------ISDHNGLEVTL 261


>gi|29830952|ref|NP_825586.1| hypothetical protein SAV_4409 [Streptomyces avermitilis MA-4680]
 gi|29608065|dbj|BAC72121.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 337

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/295 (10%), Positives = 73/295 (24%), Gaps = 73/295 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P    +A+ +R+++ N+      +                  L    +    DIVF++E 
Sbjct: 105 PTGTPLAE-LRVLTSNVQFGRGTDS-----------------LVAAVRRARPDIVFVEEC 146

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                  + + F  +               +R           +  +         P   
Sbjct: 147 EYRCSATLERAFGGSDGTY---------PYRRAVEGAGSDGSVILSRFPLRAAAGVPGTM 197

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                           + ++ G  + +   H                    L    + L 
Sbjct: 198 GMPG-----------AVADVRGHDVRLQLAHPMPPLPGQ------------LDVWRRELG 234

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                      P ++AGDFN   ++          +     L    +   +     +   
Sbjct: 235 RIRDYAVAGDDPTILAGDFNASQDHAAFRRILDTGLRDGARLAGADR---TPSWPARTAG 291

Query: 253 NKIP----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++     ID+ ++  +              ++ +     G   +DH  + +D  
Sbjct: 292 GRLRLGAQIDHVLVSPD--------------FSANSADFLGIDGTDHRALLVDLT 332


>gi|326511341|dbj|BAJ87684.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 306

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 72/272 (26%), Gaps = 59/272 (21%)

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+      ++   +       S+           ++  +   AV  K     ++    L 
Sbjct: 40  ELKDDTTSSREEKQIVLRALSSSPFKDYRVWWSLSDSKYAGTAVFMKKKFEPKKVSFNLD 99

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              S   A  R     ++ +  +   +L+ +  +     +       S     +  + + 
Sbjct: 100 RTSSKHDADGR-----VIIVEFESFLLLNTYAPN-----NGWKEEENSFQRRRKWDKRML 149

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLG-------------------------------NN 221
           +++ Q      P +  GD N     +                                  
Sbjct: 150 EFVQQV---DKPLIWCGDLNVSHGEIDVSHPDFFSDAKLNGYIPPNKEDCGQPGFTLAER 206

Query: 222 DDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
             F   +     +  +               S     K    ++ IDYFV+ +     ++
Sbjct: 207 QRFGNILSQGKLVDAYRYLHKEKDMECGFSWSGNPIGKYRGKRMRIDYFVVSEGLKDRIV 266

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        I+  G   SDHCP+S++  
Sbjct: 267 SCEMH-----GHGIELEGFYGSDHCPVSLELS 293


>gi|320094449|ref|ZP_08026228.1| endonuclease/exonuclease/phosphatase [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319978623|gb|EFW10187.1| endonuclease/exonuclease/phosphatase [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 476

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/382 (10%), Positives = 89/382 (23%), Gaps = 92/382 (24%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
                     + + + ++N  +L+      L  +         + + +  + +D DI+ +
Sbjct: 26  LAEAAQPPTTEALTVATFN-ASLNRNADGELLADLATGGNEQASNVAETIQRVDPDILLI 84

Query: 72  QEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN---------------------- 107
            E    +      +F  N   + ++    +++    S                       
Sbjct: 85  NEFDYDAEGKAVDLFRTNYLEVAHNGAAPVSYPYAWSGPVNTGVPSGFDLDKDGTTTGPG 144

Query: 108 -------NDIHTAIAVRKKNVRVLQQ-----------------SYPLLGAKDSFSRAGNR 143
                          V  K      Q                      G          R
Sbjct: 145 DAWGFGKFPGQYGFTVYSKYPIKTDQIRTFRNFLWKDMPGALLPSNDDGTGWYSDEVLQR 204

Query: 144 RAV------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             +      +L V++NG  + VL  H     F    +     +   +   A ++ +    
Sbjct: 205 FPLSSKTHADLPVDVNGTTVHVLAAHPTPPSFDGPEQRNKKRNFDEIRVWADYIANRADY 264

Query: 198 KKESL---------VPFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKDSR--- 244
             +             FVI GD+N       +      + +     +   P         
Sbjct: 265 LYDDNGVRGGLATDANFVILGDYNSDPLDGDSYPGAIDQLLTSPRVVDTMPTSAGGPAEA 324

Query: 245 -----------------CNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                                 +        IDY +   N    + +        +++  
Sbjct: 325 ELQGGANLAHKTDPKYDTGDFTDDPRPGNLRIDYVL--PNTGTQVDEAHVFWPTRDDELF 382

Query: 286 KSRGKRL---SDHCPISIDYDF 304
           +  G      SDH  +     F
Sbjct: 383 RLTGVHPFPTSDHRMVWTRLRF 404


>gi|325105103|ref|YP_004274757.1| domain of unknown function DUF1735 [Pedobacter saltans DSM 12145]
 gi|324973951|gb|ADY52935.1| domain of unknown function DUF1735 [Pedobacter saltans DSM 12145]
          Length = 402

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 73/282 (25%), Gaps = 56/282 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R++S+ I                K  T D   +       + D + ++E+ S    + 
Sbjct: 175 TIRVMSYGI----------------KSGTVDMDAVAAVVNGFNPDFLVIREIDSKTTRSS 218

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                              +      +      V  K   +    Y L            
Sbjct: 219 GRDLPKILSGLINMPNYVFAAAQPFQNGDYGTVVYSKFPIIDSVKYQLKSTA-------- 270

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                         + ++ + LK+   +       + S ++   QA  L D +     + 
Sbjct: 271 ---------TEKGPVAIIKVKLKNQYDMIFAGTHLNASVAIRDPQATELYDLLAAY--TN 319

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           VP ++AG+FN K         F            FP           +       D  + 
Sbjct: 320 VPVILAGNFNDKATTGTVYQKFSTQFS-------FPCVTCPSNYPKASPTGNS--DMLMF 370

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +       + F  + Y      +     SDH P   D  F
Sbjct: 371 KPS-------DKFRVLNYTLGATST-----SDHLPAVADLQF 400


>gi|306832641|ref|ZP_07465780.1| RgfB protein [Streptococcus bovis ATCC 700338]
 gi|304425249|gb|EFM28376.1| RgfB protein [Streptococcus bovis ATCC 700338]
          Length = 276

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 92/298 (30%), Gaps = 47/298 (15%)

Query: 25  RLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL--QEMGSYNAV- 80
           + ++ N +  L       L+  +    + +Y ++    + ++ DI  L  +E+  Y  + 
Sbjct: 8   KFLTLNTHSWLEANSLKKLFDLAETIYSENYDVIC--LQEINQDIRGLLTKEVDGYEKLP 65

Query: 81  -AKVFPKNTWCIFYS--------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            +    ++ + +                           +  + +  K    +     L+
Sbjct: 66  GSPALHRDNYALQLVNYLRSQGRYYYWSWAYNHIGYEKYNEGVVILSKTPIKVN--DILV 123

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              D  +    RR +    EI+ K I V+ +H+  F      E                 
Sbjct: 124 SDVDDETDFHTRRVLVAETEIDQKPITVVSLHMSWFGKGFESEWQKLE------------ 171

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---NAN 248
               T   +S  P V+ GDFN   +  G +      +D  DS     K +       + +
Sbjct: 172 ----TALLDSPKPLVLMGDFNNPTDTAGYDMILNSPLDLQDSHKVAKKVQGDHTIIEDID 227

Query: 249 KNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               NK  +  D+    +             +             +SDH  ++++ ++
Sbjct: 228 GWEGNKQSLKVDHVFTSK---------GIDILSSTVTFDGGEAPIVSDHFGLAVELNY 276


>gi|219109505|ref|XP_002176507.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411042|gb|EEC50970.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 625

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 79/325 (24%), Gaps = 53/325 (16%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79
            R++++N+     + Q+               +  + +   +   ++V LQE+    Y  
Sbjct: 286 FRVITYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREIIDASPEVVCLQEIQADHYEN 345

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF-- 137
              V   +        ++           D       R K   V   S            
Sbjct: 346 HVYVAMADAGFEGVYKQKTRQSMGLAGKVDGCALFWRRSKFHLVESYSIEFNEVAQRQAT 405

Query: 138 ------SRAGNRRAVELLVEINGKKIWVLDIHLKSF---------CFLDSLENTYSPSCS 182
                  R+    A    +  +     V+   ++           C  ++   +      
Sbjct: 406 QVLGLNPRSEEGVAFLNRLSKDNVAQLVVLEFIQPSRSNREISQVCIANTHLYSNKDFPD 465

Query: 183 LLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +   Q   L   +        + +P +I GDFN   +    +    +T+ P    +    
Sbjct: 466 VKLWQTWQLLQELESFIMSRGTNLPLIICGDFNSTPDTAVYDLLSRQTVHPGHPDVNVTT 525

Query: 240 E---------------------------KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                                        +     N  +  K  +DY        + L  
Sbjct: 526 GDDVPNVLPDAMNITHSFQLGSAYQTVLGEEPWTTNFTVNFKGVLDYIWYSAQNLRPLSA 585

Query: 273 ESFSEIL--YNEDDIKSRGKRLSDH 295
               E        +     +  SDH
Sbjct: 586 APIPEEKQLTKNGEALPSTEYSSDH 610


>gi|307278924|ref|ZP_07559984.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0860]
 gi|306504406|gb|EFM73616.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0860]
          Length = 351

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 89/318 (27%), Gaps = 62/318 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP 179
             +   L           N  R  +E    I G  K++ V ++HL+++   D        
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFSIKGTDKELVVFNLHLEAYDNGDGKIA---- 228

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDD 223
                  Q++ L D ++Q+       +  GDFN+                    +   D 
Sbjct: 229 -------QSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADL 281

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   D      +  +     +        ID F++  N     ++    +  Y   
Sbjct: 282 PKHFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT-- 339

Query: 284 DIKSRGKRLSDHCPISID 301
                     DH P+ ++
Sbjct: 340 ----------DHQPVKME 347


>gi|255974098|ref|ZP_05424684.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T2]
 gi|255966970|gb|EET97592.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T2]
          Length = 358

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 89/318 (27%), Gaps = 62/318 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP 179
             +   L           N  R  +E    I G  K++ V ++HL+++   D        
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFSIKGTDKELVVFNLHLEAYDNGDGKIA---- 235

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDD 223
                  Q++ L D ++Q+       +  GDFN+                    +   D 
Sbjct: 236 -------QSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADL 288

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   D      +  +     +        ID F++  N     ++    +  Y   
Sbjct: 289 PKHFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT-- 346

Query: 284 DIKSRGKRLSDHCPISID 301
                     DH P+ ++
Sbjct: 347 ----------DHQPVKME 354


>gi|259503288|ref|ZP_05746190.1| exodeoxyribonuclease [Lactobacillus antri DSM 16041]
 gi|259168743|gb|EEW53238.1| exodeoxyribonuclease [Lactobacillus antri DSM 16041]
          Length = 275

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 77/305 (25%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++++     +  +    R       + +    L+ D V +QE          
Sbjct: 1   MKFISWNIDSINAALTGTSTRAGETR------AVLKKLAALEPDAVAIQETKLSKNGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +   ++   S  +     +       +       SYP +GA +     G  
Sbjct: 55  KHLQVLADLFPGYQVAWRSSVEPARKGYAGTMYLYREQYQPTISYPQIGAPEPMDSEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      ++ +++  +                        L            
Sbjct: 114 ---IITLEFPD--FFLTEVYTPNSGNGLKRLAEREQWDDCYRDYLHELDQ--------QK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F      +  A 
Sbjct: 161 PVIASGDFNVAHEEIDLAHPANNHHSAGFTDEERTHFGKLLDAGFTDSFRFLHPDQAGAY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       +   +  +                DH PI
Sbjct: 221 SWWAQRVLTSKQNNSGWRIDYWLISDRLADRVSSSTMIDSGERR-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 MLEID 274


>gi|77464041|ref|YP_353545.1| hypothetical protein RSP_0472 [Rhodobacter sphaeroides 2.4.1]
 gi|126462885|ref|YP_001043999.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC
           17029]
 gi|77388459|gb|ABA79644.1| hypothetical protein RSP_0472 [Rhodobacter sphaeroides 2.4.1]
 gi|126104549|gb|ABN77227.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC
           17029]
          Length = 240

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 73/282 (25%), Gaps = 54/282 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  + + S+NI+           K        D          LDAD+V LQE       
Sbjct: 3   AADITVASYNIH-----------KGVGTDRRRDLRRTAAVIAELDADLVALQEADRRFGD 51

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        +    +    R   +  H  + + +       Q   L          
Sbjct: 52  RAGLLDLEHLKDETGLVPVKVEGRGRAHGWHGNLLLVRDAEVEEVQKIVLPS-------F 104

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+ + + I G+ + V+  HL                 +  + Q + L + I     
Sbjct: 105 EPRGALMIDMMIRGRPLRVIAAHLGLLP-------------ASRAAQTRHLLERIE--AS 149

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           +  P ++ GD N         +              F      R   ++           
Sbjct: 150 TPRPTLLMGDLN---------EWRGTGAAMGHLARHFTGGVMVRSFPSRFP--------I 192

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +        L+     ++           +R SDH PI    
Sbjct: 193 LA----LDRLMTCKHGQLHDVSTHDTPLARRASDHLPIKARL 230


>gi|312901011|ref|ZP_07760302.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0470]
 gi|311291837|gb|EFQ70393.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0470]
          Length = 351

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 89/318 (27%), Gaps = 62/318 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP 179
             +   L           N  R  +E    I G  K++ V ++HL+++   D        
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGDGKIA---- 228

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDD 223
                  Q++ L D ++Q+       +  GDFN+                    +   D 
Sbjct: 229 -------QSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPNLGEAGWAPGEIDPADL 281

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   D      +  +     +        ID F++  N     ++    +  Y   
Sbjct: 282 PKHFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT-- 339

Query: 284 DIKSRGKRLSDHCPISID 301
                     DH P+ ++
Sbjct: 340 ----------DHQPVKME 347


>gi|300934594|ref|ZP_07149850.1| exodeoxyribonuclease III [Corynebacterium resistens DSM 45100]
          Length = 270

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/318 (11%), Positives = 78/318 (24%), Gaps = 87/318 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                        +R++    D D++ LQE    +     
Sbjct: 1   MRIATWNIN----------------SVRIREERVREFLTRSDVDVLCLQETKCTDQ---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +       + +          +A+  +      ++       D        
Sbjct: 41  --------QFPDFTDTGYEQAHFGLHSFNGVAILSRVGLSSVKTNFGQPGFDKDLTQKQN 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-------- 195
                 +  N   + V  +++ +   +     TY        +    L D+         
Sbjct: 93  LEARA-IGANCGGVEVWSLYVPNGREIHDPHYTYK------LRWLHALADYAGGRTTKAI 145

Query: 196 ------TQKKESLVPFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSL 234
                    + +     + GDFN                  +   N  D    ++    +
Sbjct: 146 SADTADEAIEPASDRLCLVGDFNIAPRDEDVWDRSHFNGKTHVTPNERDCLAALEEAGLM 205

Query: 235 IRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 +D                     + ID                 +      D  
Sbjct: 206 QATALIQDE----YTYWDYQAMRFPKGEGMRID----------LQYARGITATAARVDRD 251

Query: 286 KSRGKRLSDHCPISIDYD 303
           + +GK  SDH P+ +DY+
Sbjct: 252 ERKGKGASDHAPVIVDYE 269


>gi|259649286|dbj|BAI41448.1| exodeoxyribonuclease III [Lactobacillus rhamnosus GG]
          Length = 253

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 72/302 (23%), Gaps = 81/302 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N L                             LDAD   LQE        ++
Sbjct: 2   LKMISWNVNGLRAVLKKDFMT---------------IFNELDADWFCLQETKMQAGQVEL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  F             +    ++  A+  K+  +       +   D+  R    
Sbjct: 47  DLPGYYQYF-----------NYAERKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRI--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +++ ++  +        +               L            
Sbjct: 93  ------ITLEYTKFYLMTVYTPNSGGELKRLDYRQQWDRDFLAYTNELAA--------KK 138

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V  GD N                          DF K ++     I   +        
Sbjct: 139 PLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQLNSG--FIDTFRHFYPDTVT 196

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYFV                  Y +D         SDHCP+
Sbjct: 197 YSWWSYRFHARANNAGWRIDYFVASSAFQ-----------PYIQDAKILTQIMGSDHCPV 245

Query: 299 SI 300
            +
Sbjct: 246 EL 247


>gi|302404854|ref|XP_003000264.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Verticillium albo-atrum VaMs.102]
 gi|261360921|gb|EEY23349.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Verticillium albo-atrum VaMs.102]
          Length = 703

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/360 (10%), Positives = 87/360 (24%), Gaps = 74/360 (20%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                ++++++SWN+  +  +  +      +          L+ +      AD + LQE+
Sbjct: 317 VNPSLERIKVLSWNVLCDKYATPQTYGYTPSEPLGWEYRKKLIYKEIGEKRADFLCLQEI 376

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----------IHTAIAVRKKNVRV 123
            +     +  P+     +   +     +K  +  D             +   +  K+V  
Sbjct: 377 STEAFKEEFSPELAKYEYRGVQWPKTRAKTMNERDALGVDGCATFFNASKFILLDKHVVE 436

Query: 124 LQQSYPLLGAKDSFSRAGNR------RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                       +     NR       AV + +E        + ++          +   
Sbjct: 437 FATIAINRPDMKNQHDVFNRVMPKDNIAVVIFLESRQTGARFILVNGHLAWESVLADVKL 496

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV------------------------------PFVI 207
             +  L+ Q A+  + W+                                      P ++
Sbjct: 497 IQTGILMEQVAKLAERWVRMPAVKDKKPFAFSGSGDKASPVVEPAPSQEYRNVTDIPLLV 556

Query: 208 AGDFNRKINYLGNNDDFWKTIDPN-----------------------DSLIRFPKEKDSR 244
            GDFN   +           + P+                                   +
Sbjct: 557 CGDFNSTFDSSVYELLAQGRVSPDHKELASFQYGNFTRDGIEHPFSLRDAYAPTHGTPDQ 616

Query: 245 -CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDY 302
               N        IDY     N  + +      +  Y             SDH  I  ++
Sbjct: 617 LPYTNYTPGFTDVIDYLWFSTNTLEVVDLLGPPDAEYLKRVPAFPHWHFPSDHMQIMAEF 676


>gi|69250590|ref|ZP_00605170.1| Endonuclease/exonuclease/phosphatase [Enterococcus faecium DO]
 gi|68193924|gb|EAN08498.1| Endonuclease/exonuclease/phosphatase [Enterococcus faecium DO]
          Length = 204

 Score = 68.8 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 55/211 (26%), Gaps = 37/211 (17%)

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           +      + +     + H   AV  +                S   A  R  +   +   
Sbjct: 27  TMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVSVDGAEKRGVLYCRIVPP 81

Query: 154 --GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
             GK I V+ +HL                 +    Q   L +W+ +      P ++AGDF
Sbjct: 82  MTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEWVNE-LPDGEPVLVAGDF 127

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N       +       +D       F +               + +D   +   +     
Sbjct: 128 NDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPLLRLDRIYVKNASAS--- 179

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                             + LSDH P+S + 
Sbjct: 180 --------APTALPLRTWRHLSDHAPLSAEI 202


>gi|3021428|emb|CAA10995.1| neutral sphingomyelinase [Homo sapiens]
          Length = 423

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 72/298 (24%), Gaps = 46/298 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  +N+N         +   S  R       L  +      D+  L+E+ S      +
Sbjct: 9   LRI--FNLN------CWGIPYLSKHRAD-RMRRLGDFLNQESFDLALLEEVWSEQDFQYL 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFS 138
             K +             +    +  I + + V  K+       +               
Sbjct: 60  RQKLS--------PTYPAAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGD 111

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +    L++ ++G  +     HL +               +    QA  L  +I   
Sbjct: 112 WFSGKAVGLLVLHLSGMVLNAYVTHLHA-----EYNRQKDIYLAHRVAQAWELAQFIHHT 166

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--------- 249
            +     ++ GD N             K            ++       N          
Sbjct: 167 SKKADVVLLCGDLNMHP--EDLGCCLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVS 224

Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     + IDY +  +    F I                 G  LSDH  +    
Sbjct: 225 QQELKPFPFGVRIDYVLY-KAVSGFYISC--KSFETTTGFDPHSGTPLSDHEALMATL 279


>gi|327539258|gb|EGF25881.1| deoxyribonuclease gamma [Rhodopirellula baltica WH47]
          Length = 384

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/286 (10%), Positives = 81/286 (28%), Gaps = 30/286 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80
            +R+ ++NI    +       K+           +         D+V +QE+    A+  
Sbjct: 115 SIRIATFNIQVFGKS------KSEKPDVMRQLAQVCLLF-----DVVAIQEIKGDPALPM 163

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +  +           +     R S  + +  +    +   + +  Y +    D   RA
Sbjct: 164 NGLLDEIASLGGRYDATVSAPQGRTSQTERYGYVWDTDRIDLIPESDYLVNDDLDRMHRA 223

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               + +  V     +       L +    D + +    + +        +   +   + 
Sbjct: 224 PMVASFQTRVTPTATRKPFRFTLLNAHTDPDEVGSRIGDTPANEMNVLDDVFHSVRMYEY 283

Query: 201 SL---VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                  F++ GD N    +          ++            D   N  +        
Sbjct: 284 QNTGEEDFILMGDLNVDTQW---------LLETGRIPNVTSLVGDKPTNTLQTKTY---- 330

Query: 258 DYFVMDQNAYKFLIQ-ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+ ++D    +         ++       + +  ++SDH P+  ++
Sbjct: 331 DHILIDAATTREFTGRAGVLDLKAALRITEEQALKVSDHMPVWAEF 376


>gi|12652591|gb|AAH00038.1| Sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [Homo sapiens]
 gi|119568731|gb|EAW48346.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [Homo sapiens]
 gi|123981952|gb|ABM82805.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [synthetic construct]
 gi|312151710|gb|ADQ32367.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [synthetic construct]
          Length = 423

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 72/298 (24%), Gaps = 46/298 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  +N+N         +   S  R       L  +      D+  L+E+ S      +
Sbjct: 9   LRI--FNLN------CWGIPYLSKHRAD-RMRRLGDFLNQESFDLALLEEVWSEQDFQYL 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFS 138
             K +             +    +  I + + V  K+       +               
Sbjct: 60  RQKLS--------PTYPAAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGD 111

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +    L++ ++G  +     HL +               +    QA  L  +I   
Sbjct: 112 WFSGKAVGLLVLHLSGMVLNAYVTHLHA-----EYNRQKDIYLAHRVAQAWELAQFIHHT 166

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--------- 249
            +     ++ GD N             K            ++       N          
Sbjct: 167 SKKADVVLLCGDLNMHP--EDLGCCLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVS 224

Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     + IDY +  +    F I                 G  LSDH  +    
Sbjct: 225 QQELKPFPFGVRIDYVLY-KAVSGFYISC--KSFETTTGFDPHSGTPLSDHEALMATL 279


>gi|329890223|ref|ZP_08268566.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328845524|gb|EGF95088.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 315

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 79/287 (27%), Gaps = 66/287 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+  + + + S N+                     D   + +  +  DAD+V L E+G  
Sbjct: 90  AAGPETLTVYSANLW----------------ARNQDVAAIARSIEQADADVVMLIELGDA 133

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A         +    ST R    S    +               V+    PL   +D+ 
Sbjct: 134 PAAQLDTILRAYPHRVSTPRKDRPSGAARS---------------VIASRLPLHRVRDAD 178

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            +     A+    E +   + ++ +H+                      QAQ L      
Sbjct: 179 GQGL--AALVAQAETSLGPVSLIAVHMTRPWPFQHPYGQ--------ISQAQRLAGLRAG 228

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-P 256
            +    P V+AGDFN   +         + I     LI  P         +         
Sbjct: 229 LEG---PVVVAGDFNSVSSGR-----IGRQIKAETGLIPAP--ARPGTWPSALPPFLGIT 278

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ID+     +                  + +   K  SDH P+ +   
Sbjct: 279 IDHVWRSPDLA--------------LVERRLGQKTGSDHRPVIVRLS 311


>gi|126330915|ref|XP_001362576.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit
           6-like [Monodelphis domestica]
          Length = 735

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 366 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 425

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 426 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 485

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 486 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGSGMKPIHAIDKQLLIVANAHMHWDP 545

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 546 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPSADPNSIPLVLCADLNSLPDSGVVEYLSS 605

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 606 GGVADNHKDFKELRYNECLMNFSCSGKNGTSEGRITHGFQLQSAYENNLMPYTNYTFDFK 665

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 666 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 710


>gi|116255513|ref|YP_771346.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium leguminosarum bv. viciae 3841]
 gi|115260161|emb|CAK03264.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 271

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 79/289 (27%), Gaps = 56/289 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              A  + + S+N++     +              D     +    + AD++ LQE  + 
Sbjct: 32  PRSAGTL-IASYNVHKCIGTDRRF-----------DPERTSRVIHEIGADVIALQEADTR 79

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                           +    +  +     +  H  + + KK +        L G     
Sbjct: 80  FGERTGILDLGRLERETGLIAVPVAGMAKAHGWHGNVVLFKKGLVHDVHQVKLPGL---- 135

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                R A+   +E+  G  + ++  H                     +QQA+ L + I 
Sbjct: 136 ---EPRGALVAEIELEKGGVLRIIAAHFGLLRHS-------------RAQQARMLVELIN 179

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                 +P ++ GD N         +         ++             +       + 
Sbjct: 180 D--RHEMPTILLGDLN---------EWRLGDRSSLNTFQSAFGPLPPAVPSFPAGLPLLA 228

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDYD 303
           +D  + ++             I   E       +  SDH PI   ID +
Sbjct: 229 LDRIIANRKG----------IISEVEAHDTPLARIASDHLPIKALIDLE 267


>gi|148544314|ref|YP_001271684.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016]
 gi|184153692|ref|YP_001842033.1| exodeoxyribonuclease [Lactobacillus reuteri JCM 1112]
 gi|227365036|ref|ZP_03849073.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3]
 gi|325681652|ref|ZP_08161172.1| exodeoxyribonuclease [Lactobacillus reuteri MM4-1A]
 gi|148531348|gb|ABQ83347.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016]
 gi|183225036|dbj|BAG25553.1| exodeoxyribonuclease [Lactobacillus reuteri JCM 1112]
 gi|227069924|gb|EEI08310.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3]
 gi|324978964|gb|EGC15911.1| exodeoxyribonuclease [Lactobacillus reuteri MM4-1A]
          Length = 275

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/305 (9%), Positives = 74/305 (24%), Gaps = 56/305 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++++     +  +    R       + +    +  D++ +QE          
Sbjct: 1   MKFISWNIDSINAALTGTSVRAGETR------EVLKKIAVMKPDVIAIQETKLSKNGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +    +   S  +     +             + +YP + A +     G  
Sbjct: 55  KHLTVLQELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKVTYPKINAPEPMDDEGR- 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +V +++  +        +               L            
Sbjct: 114 ---IITLEFPD--FYVTEVYTPNSGNGLKRLDERQTWDDCYRDYLHELDQ--------QK 160

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GDFN                           +  +        F           
Sbjct: 161 PVIASGDFNVAHEEIDLAHPATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVY 220

Query: 249 KNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                +            IDY+++       + +    +                DH PI
Sbjct: 221 SWWAQRVITSKQNNSGWRIDYWLVSDRLADKITEAGMIDSGERR-----------DHTPI 269

Query: 299 SIDYD 303
            ++ D
Sbjct: 270 ILEID 274


>gi|257877086|ref|ZP_05656739.1| endonuclease/exonuclease/phosphatase [Enterococcus casseliflavus
           EC20]
 gi|257811252|gb|EEV40072.1| endonuclease/exonuclease/phosphatase [Enterococcus casseliflavus
           EC20]
          Length = 276

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 90/307 (29%), Gaps = 66/307 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++ N +  L E                   ++ Q     D DI+ LQE+    A   
Sbjct: 1   MKVLTLNTHSWLEEN------------QLEKCKMIAQEIATGDYDIIALQEVNQTIAAQT 48

Query: 83  VFPKNTW----------------------CIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           + P   +                       +                +  H   A+  K 
Sbjct: 49  IVPDGLYCPTDTLVEIKEDNFALRLVEELQLLDCDYYWSWTYSHVGYDIYHEGNALLSKQ 108

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             + ++   L            R+ +  + E +G+ + V+  H   +             
Sbjct: 109 PIIAKE--YLASQATDVWDHTTRKNLSGVTEADGQIVQVVSCHFSWWQDG---------- 156

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
               + + Q  + ++ ++ ++    +I GDFN      G+      ++   DS +   + 
Sbjct: 157 --KFAYEWQQTEAFLAERADT---LLILGDFNNDAASSGHQLVLDSSLQLQDSFLTASET 211

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     +  ++ R  + IDY     +              Y      +R   +SDH
Sbjct: 212 IGEASVVKAIDGWQDNREALRIDYVFASNDLQA---------TEYEVVFDGTRTPIVSDH 262

Query: 296 CPISIDY 302
             I + +
Sbjct: 263 FGIKVVF 269


>gi|187927152|ref|YP_001897639.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J]
 gi|241661660|ref|YP_002980020.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D]
 gi|309780146|ref|ZP_07674897.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA]
 gi|187724042|gb|ACD25207.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J]
 gi|240863687|gb|ACS61348.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D]
 gi|308920849|gb|EFP66495.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA]
          Length = 261

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 77/304 (25%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +        +                +    DAD V +QE+         
Sbjct: 2   LRIISANLNGVRSAASKGFF---------------DWMGKQDADFVCVQELKCAQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +        +         A    +     +   +              R
Sbjct: 43  ---DMTPEFLAPHGYHGVFQHAVKKGYSGAGLYTRHKPDEVIVGFDNGEFDAEGRYVEAR 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                       K+ V+ +++ S    +  +        L  +  + L+       E   
Sbjct: 100 Y----------GKLSVISVYVPSGSSGEERQQAKFRFMDLFMEHLKDLRH------EKGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N     +   +                +   +      +   +  D R    
Sbjct: 144 EVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWLTKLFDEVGYVDVFRTLDQRPEQY 203

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          + S             +  + SDH P++
Sbjct: 204 TWWSNRGQAYAKNVGWRIDYQIATPGIAATARRASI-----------FKDIKFSDHAPLT 252

Query: 300 IDYD 303
           IDYD
Sbjct: 253 IDYD 256


>gi|15899057|ref|NP_343662.1| exodeoxyribonuclease [Sulfolobus solfataricus P2]
 gi|284175276|ref|ZP_06389245.1| exodeoxyribonuclease [Sulfolobus solfataricus 98/2]
 gi|13815592|gb|AAK42452.1| Exodeoxyribonuclease [Sulfolobus solfataricus P2]
 gi|261600804|gb|ACX90407.1| exodeoxyribonuclease III Xth [Sulfolobus solfataricus 98/2]
          Length = 247

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 74/302 (24%), Gaps = 77/302 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VSWNIN L                 +    L  + ++   DIV  QE         +
Sbjct: 1   MKIVSWNINGLRS---------------ALKKNLVNFLESNTFDIVMFQETRG-----DI 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +   + Y                 ++ +    K   +       +   D   R    
Sbjct: 41  VPLDFIMMGYEVISFPAR------RKGYSGVMTLTKIKPIKVIKGLQIKEFDDEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V +  K  ++++ +           +      + +      L++          
Sbjct: 91  -----TVSLELKDFYLINAYFPRAGDNLERLDFKLKFNNGIENFLLKLREV--------K 137

Query: 204 PFVIAGDFNRK-------------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           P ++ GDFN                        ++  +     +  F             
Sbjct: 138 PVILCGDFNIAHQSIDAAFSDPKIPGLTPQERAWFTHLLSLGFIDTFRYLH-PNVRKYSW 196

Query: 251 LRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                          +DY ++ +     +                    + SDH PI ++
Sbjct: 197 WSYMGNAREKNLGLRLDYCIVSEELKDSIKMADILT-----------DVQGSDHAPIILE 245

Query: 302 YD 303
             
Sbjct: 246 LT 247


>gi|332358249|gb|EGJ36077.1| RgfB protein [Streptococcus sanguinis SK355]
          Length = 271

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 70/280 (25%), Gaps = 54/280 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------- 94
           ++  +    L +       D++ LQE+       +V     +                  
Sbjct: 15  EKQETKLNQLVERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAVAIHQDNFALCL 74

Query: 95  ---------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 +  +  +A+  +N     +   L+   +  +    R+ 
Sbjct: 75  VEKLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPGEV--LVSEANDPTDYHTRKV 132

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +    E+ G+ + +   HL  +      E     +                +  ++  P 
Sbjct: 133 LLAETEVEGQLLTIASCHLSWWDKGFQGEWAKLEA----------------ELLKAESPL 176

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYF 260
           V+ GDFN  +   G        +   DS     +                NK    IDY 
Sbjct: 177 VLMGDFNNPVGQQGYQTILASPLKLQDSHTAAKEASGEATVEGTIAGWDDNKHALKIDYV 236

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              Q          F                +SDH  + +
Sbjct: 237 FTSQGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|320104723|ref|YP_004180314.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
 gi|319752005|gb|ADV63765.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
          Length = 390

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 73/293 (24%), Gaps = 57/293 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNS-------VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           ++ WN+   S  + V+    +                    Y      D++ LQE  S  
Sbjct: 120 VMDWNVPWRSWVDPVAPDSPTIRVVTLNTGVGRFHAERFAAYVDQHGPDLIGLQEAQSSE 179

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            V  +                N     +        A R    RV           D   
Sbjct: 180 LVNWL---------------TNPGDWFTARQGELIFASRWPIERVELLD-------DRRD 217

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHL--------KSFCFLDSLENTYSPSCSLLSQQAQW 190
                    ++V      I  +++HL         +F          + +       +Q 
Sbjct: 218 FGFRGTVAAVVVRSPWGPIRWVNLHLRSPRDGLTNAFYGNPQAIADMTLNLKRRDLGSQV 277

Query: 191 LKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
              WI  Q     +P ++ GDFN+          F +         +           + 
Sbjct: 278 ASSWIRAQSARDGLPTIVCGDFNQPTQSY----LFRRDWGGFADAFQVAGLGYGHTWFSS 333

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  ID+ +   + +     E   ++              SDH P+  D 
Sbjct: 334 WHGL--RIDHVLGSPSHWNPRRCEVGPDMR-------------SDHRPVLADL 371


>gi|307110132|gb|EFN58369.1| hypothetical protein CHLNCDRAFT_57159 [Chlorella variabilis]
          Length = 431

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/283 (10%), Positives = 73/283 (25%), Gaps = 36/283 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ +++WN+           W             +    +      V LQE+        
Sbjct: 176 ELSILTWNV-----------WFMEDVHVAQRMAAIGAIIQANQPHFVCLQEVT------- 217

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P        S       +        +  + +  +       S          +    
Sbjct: 218 --PLIYGLFCCSPWWDRYTASPCPAGVQYFTVLLWHR----SVGSVRGCDQLPFSNSVMG 271

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +   + G  + V   HL+S    D+  +    +      Q +     + +  E  
Sbjct: 272 RDLKSVAGTLGGWPVRVATTHLESPTSWDNTFSAQRVA------QCKQSLAVLDRAPEGD 325

Query: 203 VPFVIAGDFNRKINY---LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
              ++AGD N   +              +  +D          +     K+  ++  +D 
Sbjct: 326 --VLVAGDMNWNPDDGAPPLPGGWSDAWLHLHDGDPGLTYSSRANPMLRKSRIHR-RLDR 382

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +    ++    E   +        + R    SDH  + +  
Sbjct: 383 VFVKLRRWRLHSMELLGQQALPGLQFEGRPVLPSDHFGLLLRL 425


>gi|115385633|ref|XP_001209363.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114187810|gb|EAU29510.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 299

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 79/295 (26%), Gaps = 23/295 (7%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    +R+++ NI   +        +   +R       L    +N +   + LQE+    
Sbjct: 4   AAELSIRILTHNIRY-ATTAPFKGERPWAERKQLLINELLFNTRNQN-SFICLQEVLHNQ 61

Query: 79  AVAKVFPKNT-----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            V  +   N+     W            +   S                V     P + +
Sbjct: 62  LVDVLSGLNSSPTTSWDYIGVGRDDGYQAGEYSAIIYQPQHWEINHWETVWLSETPDVPS 121

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           K S+  A  R     +      +  VL ++       D    +   +  ++    + +  
Sbjct: 122 K-SWDAASIRIVTIGVFTHRASRQTVLAMNTHL---DDQGARSRLEAARII---LRKISQ 174

Query: 194 WITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-EKDSRCNANKN 250
           +              +AGDFN +       +         D+ +  P  E          
Sbjct: 175 YSAGDYGDDFIDGVFLAGDFNSQDFEEAYVELTAPGSPLADAAVLVPAAEHYGNQLTWTG 234

Query: 251 LRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     IDY ++         Q    +      +    G   SDH  + +D
Sbjct: 235 FGYEGQDPTRIDYVLLGNGTAGG--QAWTVDGYAVLANRFDDGVYNSDHRAVVVD 287


>gi|326430956|gb|EGD76526.1| hypothetical protein PTSG_07643 [Salpingoeca sp. ATCC 50818]
          Length = 291

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/301 (10%), Positives = 73/301 (24%), Gaps = 38/301 (12%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTL---LRQYAKNLDAD-IVFLQEMGSYNAVA 81
           +V++N+ +    +       +      D      + +    +++D I+ LQE+       
Sbjct: 3   VVTFNVLSPPLTQKDYFPYLTEDLLDPDVRWKMLVAELLDLMESDSIICLQEVDHSWFGK 62

Query: 82  KVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            V         +                       +                        
Sbjct: 63  FVLLFEKEGYTFVPVTYSPLLGVAIAFPRARIGDLIPDCIGVRSISKLRDSTITAKRCWN 122

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
              +         G+   V   H+        +           +     L  W      
Sbjct: 123 VALQVHLTRSSGKGQDFAVTTYHMPCKFREPHVM----------AMHCSMLVKW-AHNTA 171

Query: 201 SLVPFVIAGDFNRKINYLGNN------------------DDFWKTIDPNDSLIRFPKEKD 242
           + +P+++AGDFN K      +                     +  +              
Sbjct: 172 NSLPYIVAGDFNIKPKDPCYDMIVNGFIHPEVKGALATPAATFNEVPKALRSALREHHGR 231

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                N     +  +DY  +      ++++++     + E    S  + +SDH P+    
Sbjct: 232 EPEFTNWTHEFQDTLDYIFLSDE---WVVRDACDPESFPEGPYPSE-RVVSDHIPLWATL 287

Query: 303 D 303
           D
Sbjct: 288 D 288


>gi|222837089|gb|EEE75468.1| predicted protein [Populus trichocarpa]
          Length = 203

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 55/211 (26%), Gaps = 37/211 (17%)

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           +      + +     + H   AV  +                S   A  R  +   +   
Sbjct: 26  TMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVSVDGAEKRGVLYCRIVPP 80

Query: 154 --GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
             GK I V+ +HL                 +    Q   L +W+ +      P ++AGDF
Sbjct: 81  MTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEWVNE-LPDGEPVLVAGDF 126

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N       +       +D       F +               + +D   +   +     
Sbjct: 127 NDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPLLRLDRIYVKNASAS--- 178

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                             + LSDH P+S + 
Sbjct: 179 --------APTALPLRTWRHLSDHAPLSAEI 201


>gi|227538285|ref|ZP_03968334.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227241800|gb|EEI91815.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 326

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 96/325 (29%), Gaps = 52/325 (16%)

Query: 1   MIRKYVLALVF---------FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           MIR   + L F          ++   AS A    ++++NI  L E    ++         
Sbjct: 29  MIRTSRITLNFNRSDKVAAASILELPASNAGSFSVLTYNIAGLPEPISSAVTP------- 81

Query: 52  SDYTLLRQY-AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
              + +     K    D+V +QE  +YN            ++ +       ++       
Sbjct: 82  -RASSIADIGMKINRYDVVNVQEDFNYNR----------ELYSNGNEHPFRTETMGKVPF 130

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              +    K      Q         +        +V  L       + + +IH  +    
Sbjct: 131 SDGLNTLSKYPISDIQRIRWKDCTGADCLTPKGFSVVSLQLAKDVFVDLYNIHANAQDTP 190

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
           D+                  L  +I +        ++ GDFN   +Y    D+    I  
Sbjct: 191 DAAVARGKN--------MDQLASFIKEH-SKDKAILLMGDFNA--HYSFELDNVRNFIKE 239

Query: 231 NDSLIRFPKEKDSRCNANKNLRN-----------KIPIDYFVMDQNAYKFLIQESFSEIL 279
              +  +   ++     + +              K  ID  +   +A    I E ++   
Sbjct: 240 TRMIDTWVYLENKGIVPHIDPIYSAGDILAIRKDKESIDKIMFRNSADLHFIPERYTIEN 299

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
               D    G  LSDHC +S+ + +
Sbjct: 300 RLFTDKS--GIPLSDHCAVSLSFSW 322


>gi|308808454|ref|XP_003081537.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
 gi|116060002|emb|CAL56061.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
          Length = 572

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/356 (10%), Positives = 88/356 (24%), Gaps = 65/356 (18%)

Query: 13  LVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           ++  T+   +     ++N+  +     +      +           + +   N +ADI+ 
Sbjct: 204 IMHNTSPEPRTFTCATYNVLADLYCNADMYGYVPDWALAWAYRRQNILKEIVNYNADILC 263

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ S +       +     + S  +            +    A+  K  +        
Sbjct: 264 LQEVQSDHYEEFFQGEMAKYGYASVYKKKTAQIFSEGKFVIDGCAIFFKKDKFALIKKYE 323

Query: 131 -------------LGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCFLDS 172
                        LG       A NR      A+ +++E       ++    +  C  ++
Sbjct: 324 VEFNKAALSLVESLGGATQKKDALNRLMKDNIALIVVLEALDVD-QLMSGKRQLLCVANT 382

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYL------------- 218
             +  +    +   Q   L   + +   S   P V+ GDFN                   
Sbjct: 383 HIHANTEHNDVKLWQVHTLLKGLEKIATSAEIPMVVCGDFNSVPGSAAHSLLSAGRVPAD 442

Query: 219 ------GNNDDFWKTIDPNDSLIRFPKEK----------------------DSRCNANKN 250
                         +   +  L                                   N  
Sbjct: 443 HPELGIDPFGILQPSTKLSHPLPLVSAYTNLHKPCLDSDALERQRDRVDVIGEPLFTNCT 502

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESF--SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +DY    ++A   +          +  +       +  SDH  +  ++ +
Sbjct: 503 KDFNGALDYVFYTEDALSPISLLELPSEREVRAKYGGLPNTQLSSDHICLMTEFQW 558


>gi|332797757|ref|YP_004459257.1| exodeoxyribonuclease III Xth [Acidianus hospitalis W1]
 gi|332695492|gb|AEE94959.1| exodeoxyribonuclease III Xth [Acidianus hospitalis W1]
          Length = 247

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 78/302 (25%), Gaps = 79/302 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWN+N L                           K+ +ADI+  QE+   + +   
Sbjct: 1   MRLISWNVNGLKAIMSKGF---------------IDIIKSFNADILMFQEIK-TDVIPLD 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                + I+    +   +S   +   I         +   +       G       +  R
Sbjct: 45  LQSLGYEIYVFPAKRKGYSGTMTMTRI---------HPISVS-----YGLGKEEYDSEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +   + +V++ +  +        +          +    LK           
Sbjct: 91  -----VIILEYPEYYVINTYFPNAGEGLKRLDFKLSFNRDFEKFVISLKK---------- 135

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTI-------DPNDSLIRFPKEKDSRCN-------ANK 249
           P +I GDFN     +                 +                           
Sbjct: 136 PCIICGDFNVAHQEIDIARPKDNVNHAGFTPQEREWFSHFLSLGYVDTYRMFVKEGGHYS 195

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY V+ ++    +I+    E +             SDH PI +
Sbjct: 196 WWSYRFHAREKNIGWRIDYCVVSESLKGRVIKADILEKV-----------MGSDHAPILL 244

Query: 301 DY 302
           + 
Sbjct: 245 EI 246


>gi|41055919|ref|NP_956440.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Danio rerio]
 gi|28278715|gb|AAH44527.1| Zgc:55889 [Danio rerio]
 gi|182890762|gb|AAI65311.1| Zgc:55889 protein [Danio rerio]
          Length = 558

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/338 (10%), Positives = 86/338 (25%), Gaps = 84/338 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           +++V+WNIN +   +                  +++   + DADI+ +QE      +   
Sbjct: 1   MKIVTWNINGIRTFKNG----------------IKKILDSFDADIICVQETKVTRDLLDE 44

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNND----------IHTAIAVRKKNVRVLQQSYPL 130
           K    + +  ++S +     +S   +               T +   +  V         
Sbjct: 45  KTAIVDGYNSYFSFSRGRSGYSGVATYCKDAATPFLAEEGLTGLLSNQGAVIGCYGDQVE 104

Query: 131 LGAKDSFS-RAGNRRAV---ELLVEINGKKIWVLDIHLK-SFCFLDSLENTYSPSCSLLS 185
           L +++  +     R  +     + +   +K+ V++++   +       +        LL 
Sbjct: 105 LTSEELLALDNEGRAVITQHHFIGQDGLQKLTVINVYCPRADPDKPERKEFKLQFYRLLQ 164

Query: 186 QQAQWL------------------------------------KDWITQKKESLVPFVIAG 209
            +A+ +                                    + W+ Q           G
Sbjct: 165 CRAEAILSSGSHVIILGDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDQFLFETAENSENG 224

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQN 265
           +   +                +       +     C +             IDY   + +
Sbjct: 225 NAADEPAEDFQESASGGKFVDSFRYFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFSNHS 284

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                         +            SDHCP+     
Sbjct: 285 L----------VKTFFIGVDIMPEVEGSDHCPVWAQLS 312


>gi|71274786|ref|ZP_00651074.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Dixon]
 gi|71901074|ref|ZP_00683183.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1]
 gi|170729968|ref|YP_001775401.1| hypothetical protein Xfasm12_0781 [Xylella fastidiosa M12]
 gi|71164518|gb|EAO14232.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Dixon]
 gi|71729156|gb|EAO31278.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1]
 gi|167964761|gb|ACA11771.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 256

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 84/288 (29%), Gaps = 57/288 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R+++ NI   S     S +            R   +   + Q A     DIV LQE   
Sbjct: 9   LRVLTANIQAASSTRRYSDYVTRSWSHALPIGRKRINLDAIAQLAGER--DIVGLQESDP 66

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +  +    +  +    +     +H   R       +A  +  +       ++ L G   
Sbjct: 67  GSLRSGFTNQTCYLAQRAGFHYWSHQPNRRIAGVASSANGLLSRLKPRQIHNHALPG--- 123

Query: 136 SFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  R  +       G   + V  +HL                      Q  ++ D 
Sbjct: 124 ---WIRGRGVLLAKFGNGGFDSLVVAVVHLSLG-------------VRSRMAQLVFIADL 167

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +   +    ++ GDFN + +       + +T      ++              +   +
Sbjct: 168 LAEYPNT----ILMGDFNCRADCSEMQVLYRRTRLQPPGVVIPT---------FPSWCPE 214

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ID+ ++ +              +   + + +     SDH  +S+D 
Sbjct: 215 RAIDHILVSEGF-----------YICKTEAVPAA---FSDHLAVSMDL 248


>gi|256841497|ref|ZP_05547004.1| endonuclease/exonuclease/phosphatase [Parabacteroides sp. D13]
 gi|256737340|gb|EEU50667.1| endonuclease/exonuclease/phosphatase [Parabacteroides sp. D13]
          Length = 293

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 79/291 (27%), Gaps = 51/291 (17%)

Query: 2   IRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           +RK    L    + C A  A       V++ S+NI  L+   G               + 
Sbjct: 1   MRKISEILCCVAILCCALSACSDKPATVKVSSFNI-WLNTLGGKLPP-----------SQ 48

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
             +  +    DIV +QE         ++ ++     +  E   +      N      I  
Sbjct: 49  TAKVIEASQTDIVGIQE-------GHIYEEDGIKHDHVPEIAESLGFHLFNQGEGHYILS 101

Query: 117 RKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           R   V      Y   +   KD F    N     +      +   +  I    + F+D+ E
Sbjct: 102 RYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYI----PYQPYQLNGIPYGDYPFIDTEE 157

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223
                +     ++    +  I Q  +   P  + GDFN                      
Sbjct: 158 EAVWFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEPSFLDWTQRAADAGIHKIKVE 217

Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQ 264
                 +  I  NDS      ++ S                  +D+ +   
Sbjct: 218 WPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILDRLDFVLYSG 268


>gi|229088752|ref|ZP_04220309.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
 gi|228694577|gb|EEL47996.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
          Length = 248

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/287 (9%), Positives = 76/287 (26%), Gaps = 57/287 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++ ++WNI                  +     L+ +  +    D++ + E        +
Sbjct: 6   PLKTLTWNIR--------------QGGSEKRIPLIAEQLQKHAPDVLVVTEYWEGKKGDR 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +                         +       +   +      + ++ +         
Sbjct: 52  LQELL-------------RDAGYVYMETSGGQFKQNSILIASLHEFEVVPSFYKREMNKE 98

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    L +++  + + +L +H+ +                      + +  +  +   + 
Sbjct: 99  R---WLEIKLVKQGLHILAVHIPTNNHNP----------QEKLDFWKEVNAFAREHSNTK 145

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPND----SLIRFPKEKDSRCNANKNLRNKI--- 255
              +I GDFN  +        F+      +          +      N      N     
Sbjct: 146 S--IIIGDFNTGLPEDAQGAPFYGANYMKELIDLGWTDAWRHTHGSFNGYSWYSNTENGF 203

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+  +  +    +++  FS         + R    SDH  + +++
Sbjct: 204 RIDHAFVSSSLKDAILEAYFSH--------RERLLGYSDHSVLVVEF 242


>gi|289616636|emb|CBI56586.1| unnamed protein product [Sordaria macrospora]
          Length = 641

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/338 (9%), Positives = 69/338 (20%), Gaps = 90/338 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ +WN                           +     L+ DIV +QE  +   +   
Sbjct: 3   LRITTWNGEN---------------------RTFQSMFDTLEVDIVVMQETKIQRKDLRD 41

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKN-------VRVLQQSYPLLGA 133
            +     W +++S  +    +S             VR +               +  L A
Sbjct: 42  DMVLVPGWDVYFSLPKYKKGYSGVAIYTRSSKCCPVRAEEGITGVLCPPNSSTKFRDLPA 101

Query: 134 KDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA--Q 189
                       +   V+      +   + +   +F  +               +QA   
Sbjct: 102 DQQIGGYPTPGQLSSDVDEAQLDSEGRCVILEFPAFVLIGVYSPATRDETRTEFRQAFID 161

Query: 190 WLKDWITQKKESLVPFVIAGDFN----------------------RKINYLGNNDDFWKT 227
            +   +           + GD N                             +     + 
Sbjct: 162 AMDARVRNLIAMGKEVFLCGDLNIIRNEMDTAGLPERLKKEAMTLDDFISTPSRRFLNQI 221

Query: 228 IDPND-------------SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQN 265
           +                       +    R                     IDY +    
Sbjct: 222 VFGGRVIGEPDEGREKPVLWDLCREFHPRRPGMYTCWETRKNARPGNYGSRIDYVLCSSG 281

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              + +  +              G   SDHCP+     
Sbjct: 282 IKDWFVDANIQ-----------EGLLGSDHCPVYATIS 308


>gi|229365908|gb|ACQ57934.1| Deoxyribonuclease gamma precursor [Anoplopoma fimbria]
          Length = 324

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 85/287 (29%), Gaps = 35/287 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +++ S+N++                      + L +       DI+ + E+   +  +  
Sbjct: 1   MKIASFNMHRFGLT---------KVANPDILSALVKIVSRY--DIIVILEVVDVSGASVE 49

Query: 82  -KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +   N     +     ++     +          R   V ++   Y     + +   A
Sbjct: 50  IFLEELNKVNTTHHYALQLSTRLGRNRYKEQFLFLYRDDVVDLIDS-YQYEDNQVNDVDA 108

Query: 141 GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             R    L  +      K I ++ +H         L+  Y     +  +           
Sbjct: 109 FLREPYILYFKPRNTVLKDIVLIPVHASPLHTERELDELYDVFLVVRDKW---------- 158

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   +I GDF     Y+ +N      I  + +      +     +   N  +   I
Sbjct: 159 ---KTDNIMILGDFKADGVYVTDNKMKDIRIRSDKNFHWLIGDDVDTTSNTANHYSYDRI 215

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302
              V  ++    L+  S     ++++ +    +  R+SDH P+ ++ 
Sbjct: 216 --VVYGEDMLSALVPNSAKPFNFHKEFVMTEEKALRVSDHYPVEVEL 260


>gi|79610414|ref|NP_974691.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|332661207|gb|AEE86607.1| endonuclease 2 [Arabidopsis thaliana]
          Length = 610

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/345 (10%), Positives = 93/345 (26%), Gaps = 78/345 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++V++N+N L              +  S +  L +   + DADI+  QE  +      A
Sbjct: 1   MKIVTYNVNGLR-------------QRVSQFDSLLKLLDSFDADIICFQETKLRRQELTA 47

Query: 82  KVFPKNTWCIFYSTERLI-----NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +   + +  F+S  R        +S   +   + +A +  +  + V  +         +
Sbjct: 48  DLAIADGYESFFSCTRTSEKGRTGYSGVATFCRVKSASSSCETALPVTAEEGITGLVNSN 107

Query: 137 FSRAGNRRAVELL------------VEINGKKIWVLDIHL-KSFCFLDSLENTYSPSCSL 183
                +  +                ++  G+ +     H      +        +     
Sbjct: 108 SRGGKSETSTVAEGLEEYEKEELLMIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEF 167

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTI--- 228
             +    L+              + GD N     +                 F   +   
Sbjct: 168 KHRFYGVLERRWECLLRQGRRVFVVGDLNIAPFAMDRCEAGPDFEKNEFRKWFRSLLVER 227

Query: 229 ----DPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQN-------------AY 267
                         ++    C ++ +          ID+ ++  +               
Sbjct: 228 GGSFSDVFRSKHPERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLA 287

Query: 268 KFLIQESF--SEILYNEDDIKSRG-------KRLSDHCPISIDYD 303
             + +         +  +++ +R         + SDH P+ I +D
Sbjct: 288 CHVKECDILTEYKRFKNENMPTRWKGGLVTKFKGSDHVPVFISFD 332


>gi|66475540|ref|XP_627586.1| sphingomyelinase C precursor [Cryptosporidium parvum Iowa II]
 gi|32398810|emb|CAD98520.1| endonuclease/exonuclease/phosphatase, possible [Cryptosporidium
           parvum]
 gi|46229031|gb|EAK89880.1| sphingomyelinase C precursor [Cryptosporidium parvum Iowa II]
          Length = 509

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 64/210 (30%), Gaps = 18/210 (8%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++  +++N   L  +        +   T+     +    + ++ADI+ LQE+      
Sbjct: 9   PDRISFLTFNAGLLEYRICGVKLYQNPPYTSHRLLQIPSALRGINADIIALQEVFDEKHS 68

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDI-----------HTAIAVRKKNVRVLQQSYP 129
             +         Y          + S               H  + V  K   +  +   
Sbjct: 69  DYIIESLQPVYPYFARETKQSQNQKSMRWQPISVIHNQLALHNGLLVLSKYPILNARFTC 128

Query: 130 LLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                       ++  +E+ +++ G     + + +IH+ S     ++        +L ++
Sbjct: 129 FSDVTLIEEWFVSKGMLEVTIQLPGMDKSPLTLFNIHMASG----AVNPESETIETLRNK 184

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           + + L              VI GD N   N
Sbjct: 185 EIEQLLGACDHAIRRGEVPVIIGDLNAAPN 214


>gi|270293069|ref|ZP_06199280.1| RgfB protein [Streptococcus sp. M143]
 gi|270279048|gb|EFA24894.1| RgfB protein [Streptococcus sp. M143]
          Length = 271

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 76/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + LL Q   + D D++  QE+       +V   + +    +                
Sbjct: 17  EEKFQLLLQDILDKDYDLICFQEINQEITSPEVEVDHLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              + GK++ +  +HL  +                     +    +    K+   P ++A
Sbjct: 135 ETVVEGKELALASVHLSWWNKG----------------FQEEWARFEDVLKDLNKPLILA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +D  D+     +   S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLDLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +         ++SDH  ++   ++
Sbjct: 239 KEL---------EVESLHVVFDGQNSPQVSDHYGLNAVLNW 270


>gi|62085786|gb|AAX63284.1| DNA lyase [Beauveria bassiana]
 gi|62085844|gb|AAX63313.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 71/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +     +                      +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVIGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|255721849|ref|XP_002545859.1| hypothetical protein CTRG_00640 [Candida tropicalis MYA-3404]
 gi|240136348|gb|EER35901.1| hypothetical protein CTRG_00640 [Candida tropicalis MYA-3404]
          Length = 436

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 88/315 (27%), Gaps = 55/315 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLDADIVFLQEMGSYNAV 80
           Q ++L+++N   L       + K   +R  +    L    +++ D DIV LQE+      
Sbjct: 17  QSIKLLTFNTWGL-----KYISKFRKQRLRAIADSLANPASEDDDYDIVALQEVWCEEDW 71

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--QSYPLLGAKDSFS 138
                   +       R        S       +AV  K          +P+ G   +F 
Sbjct: 72  Q-------YLDLVCRVRYPYRRIFRSGIVSGPGLAVLSKIPVTETFLYRFPINGRPSAFF 124

Query: 139 RAGNRRAVELLVE------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           R        + V        +   I +L+ H+ +         +   +C     QA    
Sbjct: 125 RGDFYVGKSIAVTMFQPQHADILPIALLNSHMHAPYGKGDASYSTHRAC-----QAWDFA 179

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPND------------ 232
             +   K++    +  GD N   + L            D W  ++ +             
Sbjct: 180 KLVRMLKKAGYAVIQVGDLNSTPDSLPYKLFTIEGGLSDSWNILNKDRVIPNEEIAKLSL 239

Query: 233 ----SLIRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                L             +         +DY ++D      +  +       N     S
Sbjct: 240 EDQILLAGVTCNSRLNTWRSTRPLWEACRLDYALIDAANITPIDAKVKFVDKLNPPFRCS 299

Query: 288 RGKRLSDHCPISIDY 302
                SDH   S+D 
Sbjct: 300 Y----SDHFAYSVDL 310


>gi|254786181|ref|YP_003073610.1| PKD domain-containing protein [Teredinibacter turnerae T7901]
 gi|237683426|gb|ACR10690.1| PKD domain protein [Teredinibacter turnerae T7901]
          Length = 1627

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/380 (10%), Positives = 93/380 (24%), Gaps = 91/380 (23%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +     R+ ++N      +    L              + +  +  +AD++ L E+ 
Sbjct: 335 SMPAKQGDFRVATFNAGFDPFKVAGGLKAAFDNGDYVKAQKVAEIIQRTNADVLLLNEID 394

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-------------------------- 109
             + +A +   +   +  S       +      +                          
Sbjct: 395 GNDNMATINSFSENYLKVSQNGAGAITYDYIYTNDCNTGVPSGFDLNNDGSDNTADDAYG 454

Query: 110 -----IHTAIAVRKKNV--RVLQQSYPLLGAKDSFSRAGN-------------------- 142
                    +AV  K        +++ L   KD                           
Sbjct: 455 FGEYPGKYCMAVFSKYPLDETNSRTFQLFKWKDMPGALEPELDGEKFYSAAEWEAFRLSS 514

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----------- 191
           +  +++ V I GK I +L  H     F    +     +   +   A ++           
Sbjct: 515 KTHMDVPVTIGGKTIHILGSHPTPPTFDAEEDRNGKRNADEIRLWADYIDPAKGGYLYDD 574

Query: 192 KDWITQKKESLVPFVIAGDFN------RKINYLGNNDDFWKTID----------PNDSLI 235
            +           F+I GD N          +  ++    + +D           + +  
Sbjct: 575 NNSAGVTLNDGDMFIIVGDENASSVEGDAYIFDDDSRAIDQLLDSPYVNPNLREDSANFQ 634

Query: 236 RFPKEKDSR------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFS-----EILYNEDD 284
                  +          +      +  DY +      +      F       + Y  + 
Sbjct: 635 VPTSVGGAENSPANLYGTSHTAGWAMRADYVLPSAQGMRIKQNGVFWPRHSDNLHYLVEA 694

Query: 285 IKSRGKRLSDHCPISIDYDF 304
           + +     SDH  + +D +F
Sbjct: 695 VDATDVESSDHRLVWMDLEF 714


>gi|94984569|ref|YP_603933.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300]
 gi|94554850|gb|ABF44764.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300]
          Length = 267

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 87/316 (27%), Gaps = 82/316 (25%)

Query: 13  LVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           ++P    +V   +++ + N+N L                 +    L  +      D++ L
Sbjct: 1   MLPPMPRTVPSTLKVTTLNVNGLRS---------------ALRKGLTTWLARERPDVLLL 45

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ ++  + + F    +   +   +   +          + +A+   +     ++    
Sbjct: 46  QEVRAHP-MPEAFSDLGYAGAWFGAQKAGY----------SGVALLSLHPLSDVRA---- 90

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           G       A  R    ++       +  + ++L S       ++             +  
Sbjct: 91  GMAHPEMDAEGRVLSAVVW-----GVRFVSVYLPSGSSSPERQSFKDRV-------LEDY 138

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT----IDPNDSLIRFPKEKDSRCNA 247
             W        +P VI GD+N   + L   +           P++             + 
Sbjct: 139 HAWTQAALAEGLPLVIGGDYNIAHSELDLKNWRSNRKNSGFLPHERAWMSAHLACGLTDT 198

Query: 248 ----------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                           +           IDY +                 +   D    R
Sbjct: 199 HRAHLGERSEYTWWSQRGKAYANDVGWRIDYLLAAG--------------VPVRDLWVDR 244

Query: 289 GKRLSDHCPI--SIDY 302
             RLSDH P+  ++D 
Sbjct: 245 AARLSDHAPLTGTVDL 260


>gi|328946822|gb|EGG40959.1| RgfB protein [Streptococcus sanguinis SK1087]
          Length = 271

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 66/277 (23%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREV--LVSEVNDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E++G+ + +   HL  +      E                      +  +   P V+ 
Sbjct: 136 ETEVDGQLLTIASCHLSWWDKGFQGEWAKLE----------------EELLKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|288904371|ref|YP_003429592.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           gallolyticus UCN34]
 gi|306830403|ref|ZP_07463573.1| RgfB protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325977367|ref|YP_004287083.1| endonuclease/exonuclease/phosphatase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288731096|emb|CBI12642.1| putative endonuclease/exonuclease/phosphatase family protein
           [Streptococcus gallolyticus UCN34]
 gi|304427428|gb|EFM30530.1| RgfB protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325177295|emb|CBZ47339.1| Endonuclease/exonuclease/phosphatase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 271

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 93/298 (31%), Gaps = 47/298 (15%)

Query: 25  RLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL--QEMGSYNAV- 80
           + ++ N +  L       L+  +    + +Y ++    + ++ DI  L  +E+  Y  + 
Sbjct: 3   KFLTLNTHSWLEANSLKKLFDLAETIYSENYDVIC--LQEINQDIRGLLTKEVDGYEKLP 60

Query: 81  -AKVFPKNTWCIFYS--------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
            +    ++ + +                           +  + +  K    +     L+
Sbjct: 61  GSPALHRDNYALQLVNYLRSQGRYYYWSWAYNHIGYEKYNEGVVILSKTPIKVN--DILV 118

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              D  +    RR +    EI+ K I V+ +H+  F      E                L
Sbjct: 119 SDVDDETDFHTRRVLVAETEIDQKPITVVSLHMSWFGKGFESEWQKLE---------TAL 169

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---NAN 248
            D+         P V+ GDFN   +  G +      +D  DS     K +       + +
Sbjct: 170 LDY-------PKPLVLMGDFNNPTDTAGYDMILNSPLDLQDSHKVAKKVQGDHTIIEDID 222

Query: 249 KNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               NK  +  D+    ++            +             +SDH  ++++ ++
Sbjct: 223 GWEGNKQSLKVDHVFTSKD---------IDILSSTVTFDGGEAPIVSDHFGLAVELNY 271


>gi|301066021|ref|YP_003788044.1| exonuclease III [Lactobacillus casei str. Zhang]
 gi|300438428|gb|ADK18194.1| Exonuclease III [Lactobacillus casei str. Zhang]
          Length = 252

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 75/300 (25%), Gaps = 77/300 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                             LDAD   LQE     A    
Sbjct: 1   MKLISWNVNGLRAVLKKEFMT---------------IFNELDADWFCLQETK-MQAGQVE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K+  +       +   D+  R    
Sbjct: 45  LDLPGYHQYFN----------YAERKGYSGTAIFTKHEPLNVTYGMGVPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +++ ++  +        +               L            
Sbjct: 91  ---IITLEYPN--FYLMTVYTPNSGGELKRLDYRQQWDKDFLAYTNQLAA--------KK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P V  GD N     +   +D     +               +   I   +          
Sbjct: 138 PLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQLDSGFIDTFRNLYPDTVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYFV  ++              Y +D         SDHCP+ +
Sbjct: 198 WWSYRFHARANNAGWRIDYFVSSRDFK-----------PYIQDAKILTDIMGSDHCPVEL 246


>gi|156386929|ref|XP_001634163.1| predicted protein [Nematostella vectensis]
 gi|156221243|gb|EDO42100.1| predicted protein [Nematostella vectensis]
          Length = 286

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 93/292 (31%), Gaps = 35/292 (11%)

Query: 24  VRLVSWNIN---TLSEQEGVSLWKNSVKR-TTSDYTLLRQYAKNL-DADIVFLQEMGSYN 78
            R  ++NI        +   S W++S           +    K     D + LQE    +
Sbjct: 13  FRCATFNILAPCYNRLRGWWSAWESSKPNLYMRRSQSIIDMLKEQPHLDAICLQEFWFNH 72

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            V  +F           +  I   KR        AI + +    +  QS+       +F 
Sbjct: 73  DVEDLFESK-----LGDKYRILKLKRQGYKMDGLAILLHRSASLLGVQSF-------NFD 120

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW----LKDW 194
             GNR A+ L + +  +   V+          +           +   Q +     +  +
Sbjct: 121 DYGNRVALLLHIALPDQDKQVILATTHISYCHN------ILDEYVRMSQVKKVVSGIDKF 174

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF--PKEKDSRCNANKNLR 252
           + QK+   +P ++ GDFN         +  ++ +  +     +     +++      +  
Sbjct: 175 LKQKELHSIPVILTGDFN-----SPETNPVYQFVKGSGFASSYKVVNGREAGVTHKDHRG 229

Query: 253 NKIPIDYFVMDQNAYKFLIQ-ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++ +DY     +    +    S        D +      +SDH  I  ++D
Sbjct: 230 RELSVDYIFYRNSGSCAISPKSSIMLPQQYNDQVWPEEFTISDHRMIMTEFD 281


>gi|114764340|ref|ZP_01443568.1| Endonuclease/exonuclease/phosphatase family protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114543288|gb|EAU46305.1| Endonuclease/exonuclease/phosphatase family protein [Roseovarius
           sp. HTCC2601]
          Length = 295

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 77/307 (25%), Gaps = 43/307 (14%)

Query: 24  VRLVSWNINTLSEQEGV----------SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +R+ S N+  L                     S     +D  L  +      AD++ LQE
Sbjct: 1   MRIASLNMQNLRLLPDGSGGHLHGARDRDDAESPAHDAADRRLTAELLAATGADVLALQE 60

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG- 132
           +    ++   F                    +    +  A+  R++       +  L   
Sbjct: 61  VFDAESLD-AFHDRYLAQVADPYPHRLCLPGNDGRGLDVALMARRRWEGASSHAELLPSD 119

Query: 133 -------AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                            R  +E         + +  +HLK+             +  L  
Sbjct: 120 LGLSPLQGMPEDQPVFRRDCLEARF----GALTLFVLHLKAPWPDP------KRAWELRR 169

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            ++Q +   +   ++    +++ GD N             +    +  L      + +  
Sbjct: 170 LESQAVLRLL--PRDPEALWLVIGDLNEPRGEGERAIAPLEAAGVDLGLRLPEDRRWTYY 227

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY----------NEDDIKSRGKRLSDH 295
             + +  N+   D  +  Q             +                +       SDH
Sbjct: 228 EPHLHKHNRP--DVMIASQALAARFPDAVPRVLYRGLGREAGQGARLPGVGEHRPHASDH 285

Query: 296 CPISIDY 302
             + ID 
Sbjct: 286 AALLIDL 292


>gi|146301154|ref|YP_001195745.1| hypothetical protein Fjoh_3412 [Flavobacterium johnsoniae UW101]
 gi|146155572|gb|ABQ06426.1| hypothetical protein Fjoh_3412 [Flavobacterium johnsoniae UW101]
          Length = 394

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/389 (10%), Positives = 97/389 (24%), Gaps = 90/389 (23%)

Query: 2   IRKYVLALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKR------- 49
           ++K    L         S ++     ++   ++N++  S+           ++       
Sbjct: 1   MKKIFFILSVLSSGVLFSQSEAQEKTELTFATYNVSMESDNYSPKGAMGKSEQILIYQLN 60

Query: 50  --TTSDYTLLRQYAKNLDADIVFLQEMG--------------------SYNAVAKVFPKN 87
               +    +    + +  D++ L E                         AVA  +P  
Sbjct: 61  SGVNAQIRNIAHIIQTVRPDVILLNEFDYIKDPELGVKAFIKNYLNVSQGGAVAIDYPYY 120

Query: 88  TWCIFYSTER-------------LINHSKRDSNNDIHTAIAVRKKNVRVL--QQSYPLLG 132
            +    + +                N +           + +  K    +   +++    
Sbjct: 121 YYSTVNTGQPSPYDLNNDGKLNNFGNDAWGFGMYPGQYGMMLLSKYPIDVNAVRTFQHFK 180

Query: 133 AKDSFSRAGNRRA---------------------VELLVEINGKKIWVLDIHLKSFCFLD 171
            KD       ++A                      ++ VE+  K + VL  H     F  
Sbjct: 181 WKDMPGALLTKKADGSDWYSKKAWKEFPLSSKSHWDVPVEVGNKTVHVLVSHPTPPTFDG 240

Query: 172 SLENTYSPSCSLLSQQAQWLKD----------WITQKKESLVPFVIAGDFNRKINY-LGN 220
             +     +   +     ++ D           +         FVI GD N         
Sbjct: 241 EEDRNGKRNHDEIRFWRDYISDNSASYIYDDKGVKGGLSPDSRFVIMGDQNASPVEGNAI 300

Query: 221 NDDFWKTIDPNDSLIRFPKEKDS--------RCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
            +     ID       F                  N     ++  DY +  +  +K +  
Sbjct: 301 REGIKSLIDSPKINSDFTPASKGGAAYSPENPFGVNHTAFWRMRADYVLPSRLGFKVVNS 360

Query: 273 ESFSE-ILYNEDDIKSRGKRLSDHCPISI 300
             F         ++  + +  SDH  + +
Sbjct: 361 GVFWPAKGEPMSELVEKRESSSDHRLVWV 389


>gi|189199648|ref|XP_001936161.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187983260|gb|EDU48748.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 441

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 91/316 (28%), Gaps = 36/316 (11%)

Query: 2   IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +R  + +          S+AQ       +++N+  L      +         T++   + 
Sbjct: 1   MRSTLASACVLSSLLPLSIAQTTGAFNTLTFNVAGLPAILNGNDVPGDK---TANTARIG 57

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +     +  ++ +QE  +Y+A      K+ +    S            +N  +T    R 
Sbjct: 58  ELFTKYNISLIHVQEDFNYHATLYANDKHPFRTSTSGGVPFGSGLNSLSNFEYTGF-QRI 116

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K                 F+    + A  ++++                  L +   T +
Sbjct: 117 KWNTCSNTDSADCLTPKGFTFMRVKFAEGVVIDA---------------YNLHADAGTTA 161

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------NDDFWKTI 228
              +  +   + + D+I          ++ GD N +     +            D W  +
Sbjct: 162 ADNTARAANLRQVSDYIKANSI-GNAVIVFGDSNSRYTRTDDIPAIFSEQHGMKDTWLQL 220

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
             N        +     N          +D      +    L  + F    +    ++  
Sbjct: 221 VRNGVAPAKGADALLCSNPATT-NTCEIVDKTWYRGSPAVSLEAKKFDYAGHM--FLQEN 277

Query: 289 GKRLSDHCPISIDYDF 304
           G  LSDH  + +D+ +
Sbjct: 278 GDLLSDHNGVLVDFTW 293


>gi|329940985|ref|ZP_08290265.1| hypothetical protein SGM_5757 [Streptomyces griseoaurantiacus M045]
 gi|329300279|gb|EGG44177.1| hypothetical protein SGM_5757 [Streptomyces griseoaurantiacus M045]
          Length = 252

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 71/292 (24%), Gaps = 55/292 (18%)

Query: 14  VPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +P + +       +R +S+N+ +L                  D   L +       D+V 
Sbjct: 7   LPASGTDPDGTAVIRALSYNVRSL----------------KDDTDALARVLTACAPDLVL 50

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE   +    K   +       S   +++     +         +      V +    L
Sbjct: 51  LQEAPRFFRWRKKLAR---VAAASGLVMLSGGGTAAGPA-----LLCSLRATVERTEDVL 102

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           L       R   R     +V   G ++ VL  HL             S       +Q   
Sbjct: 103 LPLTPGQHR---RGLATAVVRFGGARLGVLSCHL-------------SLQERERYEQGGL 146

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L D +          +  GD N                   +             +    
Sbjct: 147 LLDRVAAL--GTPHVLAGGDLNEDPAGRTFRRI------AAELRDCRTVAPWGEEHTWTR 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID     +                +E D+    +  SDH P+    
Sbjct: 199 TEPHGRIDALFTSKGVGVLGCGVPLGHPGVSERDL----RAASDHLPVLAAL 246


>gi|324506588|gb|ADY42809.1| 2',5'-phosphodiesterase 12 [Ascaris suum]
          Length = 521

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 99/348 (28%), Gaps = 59/348 (16%)

Query: 16  CTASVAQKVRLVSWNIN---TLSEQEG-----VSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           CT       R++S+NI     L+ ++G             +     Y +L +      AD
Sbjct: 173 CTDWQKDGFRVMSYNILAALYLNLEQGQEDLFFPYCPKEYQEYIYRYPVLMREIPGYKAD 232

Query: 68  IVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKR------------DSNNDIHT 112
           +VFLQE+        +  +  ++ + + +  + +  +               +  +   T
Sbjct: 233 LVFLQEVDDRFQMRYLPALMREHGYEVCFKRKAVAVNEGLMICFRIKHFRLLEIYDMWLT 292

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-----INGKKIWVLDIHLKSF 167
            +   +           L   +++ +R   R  V  L+       +G++  VL  +    
Sbjct: 293 DLLDLQTFPENEDVVRLLERDEETKTRFTTRPTVIQLISLETQSASGEEAIVLAANTHLH 352

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL--------- 218
                       S       A+       Q+  + +  + AGDFN   +           
Sbjct: 353 FDPRHEHIKTLQSVLCARYIARISAKLCDQRPRARLYRLFAGDFNSTPSGGVYELLSQGV 412

Query: 219 -GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---------------------RNKIP 256
                + WK+ +    +      K    N                            +  
Sbjct: 413 ISEEHECWKSSETMGRVRMGTAFKKDGENITFWSLANDPEVTNYTRFTREDGTEGGFEGC 472

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +DY     N     +    S+ L  +          SDH PI  +  F
Sbjct: 473 LDYLWGSDNIRVNFVIPMPSDKLVLKHTALPSKIAPSDHMPIMCNVVF 520


>gi|157107037|ref|XP_001649594.1| 2-phosphodiesterase [Aedes aegypti]
 gi|108879657|gb|EAT43882.1| 2-phosphodiesterase [Aedes aegypti]
          Length = 568

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/326 (10%), Positives = 79/326 (24%), Gaps = 46/326 (14%)

Query: 23  KVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           + R++++NI          S  E      N          L  +     ++DI+ LQE+ 
Sbjct: 241 QFRVMTYNILADLYADSDYSRTELFGYCPNYALHIDYRKQLFIKEILGYNSDIICLQEVD 300

Query: 76  S---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           +      +  V         +  +           +        R+              
Sbjct: 301 AKIFDLDLTAVLRMKNLEGHFKAKGKTAEGLATFYDVNRFEELDRQGITFGENLET-APA 359

Query: 133 AKDSFSRAGNRRAVELLVEINGKKI-------------WVLDIHLKSFCFLDSLENTYSP 179
            +  +++  +   +   ++     I              +L  +   +   D+       
Sbjct: 360 FQGLWNQIKSNEKLAARIKDRSTAIQVTLLRSRSVPQKHLLVANTHFYFHPDADHIRLLQ 419

Query: 180 SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
               +       + +  +     +    +  GDFN      G      +    ++     
Sbjct: 420 GGFSMLYVRDLYERYEREMGLDRNNFAIIFCGDFNSVP-ECGMYRLMTERFVGDEMADWQ 478

Query: 238 PKEKDS------------------RCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEI 278
             E+++                      N  +  K  ID+            I    SE 
Sbjct: 479 SNEEEAVRGVTLSQPFWFKSACGCPKYTNFTVGFKACIDFIYYQSDVLRVNDIVPLPSEE 538

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304
                D        SDH  +    ++
Sbjct: 539 ELMAYDAIPSPVLPSDHIALVASLEW 564


>gi|150864008|ref|XP_001382678.2| Glucose-repressible alcohol dehydrogenase transcriptional effector
           (Cytoplasmic deadenylase) (Carbon catabolite repressor
           protein 4) [Scheffersomyces stipitis CBS 6054]
 gi|149385264|gb|ABN64649.2| Glucose-repressible alcohol dehydrogenase transcriptional effector
           (Cytoplasmic deadenylase) (Carbon catabolite repressor
           protein 4) [Scheffersomyces stipitis CBS 6054]
          Length = 369

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/332 (12%), Positives = 92/332 (27%), Gaps = 55/332 (16%)

Query: 24  VRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---Y 77
             ++++N+   + +  Q    L +N +  +   + L+ +       DI+  QEM      
Sbjct: 37  FTIMTYNLLSQHYIWNQVYGYLDQNFLSWSDYRFPLINKTISQFQCDIMCFQEMECSVYN 96

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-HTAIAVRKKNVRVLQQSYPLLGAK-- 134
           +  +  FP   +  FY  + L  +     N  I    I +      VL ++   +G    
Sbjct: 97  SYWSVGFPSPNYSSFYMKKSLPKYWADRPNEHIDGVGIFINTNRFTVLDKTMVNIGEYVK 156

Query: 135 ------DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                    +    R      V I  K    +              +       +L  Q 
Sbjct: 157 NRPQQYTMTNDMVTRLVSRNTVAIVLKLYDFISHRYVYVATTHLYWSPQFNDVKVL--QT 214

Query: 189 QWLKDWITQKKE-SLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKE 240
           + L + + +  +      ++ GD N                D     +            
Sbjct: 215 KILLNILEEFIDVPDPHIILMGDLNSNYQSTVFKLLDSDGADYHSINLSDYPEFDGLDYG 274

Query: 241 KDSR---------------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
           + +                               +        +D+  ++++ +K +   
Sbjct: 275 RGNSLVTETNHIHNQFHLYNIFEEMSREKKMSFTSFTRSLTDVLDHMFINKDKFKIMRVL 334

Query: 274 SFSEILYNEDD---IKSRGKRLSDHCPISIDY 302
           S  +  Y  D+        +  SDH P+  + 
Sbjct: 335 SGVDTNYCSDEKVLGFPNKQFPSDHIPLVAEL 366


>gi|225387525|ref|ZP_03757289.1| hypothetical protein CLOSTASPAR_01278 [Clostridium asparagiforme
           DSM 15981]
 gi|225046361|gb|EEG56607.1| hypothetical protein CLOSTASPAR_01278 [Clostridium asparagiforme
           DSM 15981]
          Length = 317

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/338 (11%), Positives = 88/338 (26%), Gaps = 93/338 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L++ N ++L E +             +   L  +       D+V LQE+        V
Sbjct: 1   MKLITLNTHSLVEPD-----------YENKLKLFAEAVLRERPDVVALQEVNQSMGEPAV 49

Query: 84  ----------------------------------FPKNTWCIF------YSTERLINHSK 103
                                                + + +        +         
Sbjct: 50  GQERLGALGFVECRERGNESKVEAGARGAVIPVRADNHAYRLAGLLAEGGAPYFWTWVPA 109

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
           +          A+  +          L G++D  +    R+A+E++++ +GK+     +H
Sbjct: 110 KIGYGRYDEGTALFSRLPVAQTGWIYLTGSRDYKNWK-TRKALEMILDFHGKRCRFFSLH 168

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
           +  +   D             + Q + L  ++     S     + GDFN      G    
Sbjct: 169 MGWWKDGDEP----------FAGQWERLSGYLKN--ASGDLCFLMGDFNSPAGMQGEGWQ 216

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--------------------IPIDYFVMD 263
                   D+      + +           +                    + IDY  ++
Sbjct: 217 LVSGSGWLDTYGLAAAKDNGVTVGGVIDGWRDSPQNADGPAPGAEGAHENGMRIDYIWVN 276

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +             +          G  +SDH  + I+
Sbjct: 277 RE---------IPVLRSQVICNGINGPVVSDHYGVMIE 305


>gi|23097966|ref|NP_691432.1| exodeoxyribonuclease [Oceanobacillus iheyensis HTE831]
 gi|22776190|dbj|BAC12467.1| exodeoxyribonuclease [Oceanobacillus iheyensis HTE831]
          Length = 269

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 72/302 (23%), Gaps = 78/302 (25%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
            +SWN+N +                         + + + AD   +QE            
Sbjct: 3   FISWNVNGIRACVRKGF---------------LDFFQEMGADFFCIQESKLQEG-QIQLD 46

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            + +  +++           +    ++  A+  K   +    +   G   +      R  
Sbjct: 47  LDGYYQYWN----------YAERKGYSGTAIFTKWEPL----HVFYGIDSNNYEPEGRI- 91

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               + +  +  ++++++  +     +           L    Q L            P 
Sbjct: 92  ----ITLEYESFYLVNVYTPNSKRDLTRLEDRLEWEDRLFDYLQKLNK--------KKPL 139

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           V  GD N   +                          +     +           +    
Sbjct: 140 VYCGDLNVAHHEIDLRNDKTNHGNSGFTKEERSKMSRLLDAGFVDTLRHFHPEADDIFTW 199

Query: 251 LRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                          IDYF++ +     L +      +             SDHCPI + 
Sbjct: 200 WSYMKTIRERNIGWRIDYFIVSEQLIPALKKSEVHSSVL-----------GSDHCPIGLV 248

Query: 302 YD 303
            D
Sbjct: 249 ID 250


>gi|328882060|emb|CCA55299.1| Endonuclease or exonuclease or phosphatase [Streptomyces venezuelae
           ATCC 10712]
          Length = 321

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 89/310 (28%), Gaps = 58/310 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            T   A+ +R +S+N+          L   +     +  + L       D+D++ LQE+ 
Sbjct: 29  VTPQDAKPLRFISYNVCG----ASCPLPAETDAARAAWVSGLVAEIDAWDSDLIMLQELC 84

Query: 76  SYNA------VAKVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNV--RVLQQ 126
                     +A+   ++++   + +         + + ND    +A+  K     V   
Sbjct: 85  YGQWTLIRDRLAQRTGEDSYDSVWGAALPSAAKCGQWNANDRRFGLAIFSKGKASFVDGT 144

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                  +D  +   +R  +     + G  +   + H+       +L             
Sbjct: 145 RSVTFLPEDPLNPTEDRILLCAQTALRGVAVRACNTHVDFNDTTTAL------------- 191

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           Q   + + +   ++   P ++AGDFN+   +   N  +              +    +  
Sbjct: 192 QVPKVAELVDAARQGGEPAILAGDFNQVPEHADMNALYNHGGGSAGRFQEVDENDKEQFK 251

Query: 247 ANKNLRNKIP---------------------IDYFVMDQNAYKFLIQESFSEILYNEDDI 285
            +   +                         IDY  +            +      + D 
Sbjct: 252 GDGCPQTADRCRSGEPTASPTCSDHTKETSKIDYVFLS-----------YEWFKTVQGDA 300

Query: 286 KSRGKRLSDH 295
                 +SDH
Sbjct: 301 LPCPPGMSDH 310


>gi|257867010|ref|ZP_05646663.1| endonuclease/exonuclease/phosphatase [Enterococcus casseliflavus
           EC30]
 gi|257873344|ref|ZP_05652997.1| endonuclease/exonuclease/phosphatase [Enterococcus casseliflavus
           EC10]
 gi|257801066|gb|EEV29996.1| endonuclease/exonuclease/phosphatase [Enterococcus casseliflavus
           EC30]
 gi|257807508|gb|EEV36330.1| endonuclease/exonuclease/phosphatase [Enterococcus casseliflavus
           EC10]
          Length = 276

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 91/307 (29%), Gaps = 66/307 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++ N +  L E                   ++ Q     D DI+ LQE+    A   
Sbjct: 1   MKVLTLNTHSWLEEN------------QLEKCKMIAQEIATGDYDIIALQEVNQTIAAQT 48

Query: 83  VFPKNTW----------------------CIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           + P   +                       +                +  H   A+  K 
Sbjct: 49  IVPDGLYCPTDTLVEIKEDNFALRLVEELQLLDCDYYWSWTYSHVGYDIYHEGNALLSKQ 108

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             + ++   L            R+ +  + E +G+ + V+  H   +             
Sbjct: 109 PIIAKE--YLASQATDVWDHTTRKNLSGVTEADGQIVQVISCHFSWWQDG---------- 156

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
               + + Q  + ++ ++ ++    +I GDFN      G+      ++   DS +   + 
Sbjct: 157 --KFAYEWQQTEAFLAERADT---LLILGDFNNDAASSGHQLVLDSSLQLQDSFLTAAET 211

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     +  ++ R  + IDY    ++              Y      +R   +SDH
Sbjct: 212 IGEASVVKAIDGWQDNREALRIDYVFTSKDLQA---------TEYEVVFDGTRTPIVSDH 262

Query: 296 CPISIDY 302
             I + +
Sbjct: 263 FGIKVVF 269


>gi|71989663|ref|NP_504373.2| hypothetical protein F14F9.5 [Caenorhabditis elegans]
 gi|75022238|sp|Q9GUC9|YFEF9_CAEEL RecName: Full=Uncharacterized protein F14F9.5; Flags: Precursor
 gi|33620952|gb|AAF98622.2| Hypothetical protein F14F9.5 [Caenorhabditis elegans]
          Length = 314

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 80/313 (25%), Gaps = 58/313 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+++NI                         + ++   ++ D+V LQE+ +       
Sbjct: 27  IRLMTFNIWNSGANVENGQ------------QKIAKHILMVNPDVVALQEVYANVTRNLT 74

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                           +       N  +   A+  ++V +   +  L  +     +   R
Sbjct: 75  LML------------GHPWVAVERNHEYPDTAILTRHVLIPNTN--LSTSGAVGVKIMLR 120

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--- 200
               +              +  +   +D L+   +        Q   + +    KK    
Sbjct: 121 TGFMIHFWSLHLDYTSYGPYAANNKLVDKLDQIMAGENVGRGPQIYEILNLPMMKKWMEK 180

Query: 201 -SLVPFVIAGDFNRKIN----------------------------YLGNNDDFWKTIDPN 231
              VP  IAGDFN   +                            +     + +  +  +
Sbjct: 181 VEDVPIFIAGDFNGPSHLDWTEQTKKIHGDWVIRWPATKELEEREFSDTFREIYPNVVSD 240

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +      K +          +  ID+         + I               S+   
Sbjct: 241 PGITWSTVNKFNPEWNYTIPEPQDRIDFLFYKGPVVPYQILTYSGCEKPQRIPFHSKNDY 300

Query: 292 LSDHCPISIDYDF 304
            SDH  +  DY F
Sbjct: 301 PSDHFAVFADYTF 313


>gi|254523952|ref|ZP_05136007.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas sp. SKA14]
 gi|219721543|gb|EED40068.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas sp. SKA14]
          Length = 245

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 77/287 (26%), Gaps = 60/287 (20%)

Query: 27  VSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++ NI   S     S +            R  S    +   A+    DIV LQE    + 
Sbjct: 2   LTANIQAGSSTRRYSDYVTRSWSHALPAGRKRSSLDAIATLAREH--DIVGLQEADPGSL 59

Query: 80  VAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +    +  +    +     +H   R       +A  +  K   V  Q + L G      
Sbjct: 60  RSGFTNQTHYLAQRAGFNYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHALPG------ 113

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R G R  +          + V   HL                      Q  ++ + ++  
Sbjct: 114 RIGGRGVLLAKFGDGADGLAVAVAHLSLGAGS-------------RMSQLGFIAELLSDH 160

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NANKNLRNKIP 256
             +    V+ GDFN           + K            + +   C      + R    
Sbjct: 161 PNA----VLMGDFNCLAERPEMQVLYQK-----------TRLQPPGCIVPTFPSWRPDRA 205

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ID+ ++        ++                    SDH  +++  D
Sbjct: 206 IDHILVSSGLQTRTVEAVP--------------AAFSDHLALAMAID 238


>gi|109073059|ref|XP_001090569.1| PREDICTED: sphingomyelin phosphodiesterase 2 [Macaca mulatta]
          Length = 423

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 71/291 (24%), Gaps = 41/291 (14%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           I  L+      L K+   R       L  +      D+  L+E+ S      +  K +  
Sbjct: 11  IFNLNCWGIPYLSKHRADR----MRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLS-- 64

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRA 145
                      +    +  I + + V  K+       +                   +  
Sbjct: 65  ------PTYPAAHHFRSGIIGSGLCVFSKHPIQELTQHVYTLNGYPYMIHHGDWFSGKAV 118

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
             L++ ++G  +     HL +               +    QA  L  +I    +     
Sbjct: 119 GLLVLHLSGMVLNAYVTHLHA-----EYNRRKDIYLAHRVAQAWELAQFIHHTSKKADVV 173

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--------------NL 251
           ++ GD N             K            ++       N                 
Sbjct: 174 LLCGDLNMHP--EDLGCCLLKEWTGLRDAYLETRDFKGSEEGNTMVPKNCYVNQQELKPF 231

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              + IDY +  +    F I      +     +    G  LSDH  +    
Sbjct: 232 PFGVRIDYMLY-KAVSGFYISC--KSLETTTGNDPYSGTPLSDHEALMATL 279


>gi|62085810|gb|AAX63296.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAASKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|239995197|ref|ZP_04715721.1| putative orphan protein [Alteromonas macleodii ATCC 27126]
          Length = 404

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/388 (9%), Positives = 93/388 (23%), Gaps = 90/388 (23%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK--------RTTSDYTLL 57
           +L  +F     ++   Q +++ ++N++  +        K S +           S    +
Sbjct: 12  LLPALFVSTLASSQEEQMLKVATFNVSMEATNYKALGMKPSDQVLQYVLSTGEHSQVKNI 71

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-------------------- 97
            +  + ++ DI+ L E        K            ++                     
Sbjct: 72  AEIIQRVNPDILMLNEFDYIADKRKGVDAFVKNYLNVSQGGLEPVDYLYTYVATVNTGEP 131

Query: 98  -------------LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                            +           +A+  K    +         K          
Sbjct: 132 TKFDLDNNGKAEGFGGDAYGFGLYPGQYGMALLSKYPIDVDGIRTFQTFKWHHMPHPQVP 191

Query: 145 AV------------------------------ELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +                              ++ V++ GK + +L +H     F  S +
Sbjct: 192 IIPDESGSTDKGKPWYDVEEWAALRLSSKSHWDVPVKVAGKTVHILAMHPTPPNFDGSED 251

Query: 175 NTYSPSCSLLSQQAQWLK----DWI------TQKKESLVPFVIAGDFNRKINYLGNNDDF 224
                +   +   A +L      +I               FV+ GDFN       + +  
Sbjct: 252 RNGKRNFDEIRLMADYLSPDKGAYIYDDNGEKVSLSENARFVLVGDFNAADIGDKHREGV 311

Query: 225 WKTIDPNDSLI--------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
            + +  +  +                +  +           DY +  +  +       F 
Sbjct: 312 IEQLTEHPLVNNDIIPTSAGGAGASGAEFSNRFTAYWGARADYVLPSRFGFDVNDAGVFW 371

Query: 277 EILYNEDDIKSRGKRLS-DHCPISIDYD 303
               ++     + +  S DH  + I   
Sbjct: 372 PAKTSDLYRLVKDREASSDHRLVWISLS 399


>gi|55822181|ref|YP_140622.1| hypothetical protein str0193 [Streptococcus thermophilus CNRZ1066]
 gi|55738166|gb|AAV61807.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 290

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 80/304 (26%), Gaps = 65/304 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ ++ N +               +     +  L++       DI+  QE+      A V
Sbjct: 21  MKFLTLNTH-----------SWIEEDAEGKFQTLKEQILKAQYDIICFQEVNQEIETAAV 69

Query: 84  FPKNTWCIFYST----------------------ERLINHSKRDSNNDIHTAIAVRKKNV 121
                + +  S                                   + ++  +AV  +  
Sbjct: 70  ETDAYYHVLPSATSIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQP 129

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
               +   L+   D  +    RR       ++G+++ V  IHL  +      E       
Sbjct: 130 LTASE--ILVSDVDDPTDYHTRRVAVAETTVDGREVAVASIHLSWWDKGFQEEWARIE-- 185

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                          + +    P ++AGDFN      G        +   DS     K  
Sbjct: 186 --------------ERFQSIGKPLILAGDFNNPAGREGYQTILASPLKLQDSFQVAQKTN 231

Query: 242 DSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            S       +  K     + IDY    Q          ++    +     +    +SDH 
Sbjct: 232 GSYTVGPGIDGWKGNEEPLRIDYVFASQE---------WAVNRLSVIFDGNNQSLVSDHY 282

Query: 297 PISI 300
            +  
Sbjct: 283 GLEA 286


>gi|47214396|emb|CAG00877.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 256

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 93/288 (32%), Gaps = 46/288 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+ L+SWNI+ L             ++       L     +  AD+VFLQE+        
Sbjct: 6   KLSLISWNIDGLDG-----------EKQPERARGLSSSLTSESADVVFLQEL-------- 46

Query: 83  VFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                 +C F        ++          TAI ++K ++ +L                 
Sbjct: 47  ---VPPYCRFLKNRLSTTYTFIEGEKEGYFTAILLKKSSITLLDWEIVDFPTT-----RM 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +   V   G+K+ ++  HL+S            P      +Q Q L   + +    
Sbjct: 99  TRNLLVAQVLFRGQKLCLMTSHLESL----------KPCAGERMRQLQLLLKKMAEM-PD 147

Query: 202 LVPFVIAGDFN------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            V  +  GD N       ++       D W+ +   +   R+  +     N N + + +I
Sbjct: 148 DVNVLFGGDTNLRDAEVARVGLPACIHDVWEQLGEPED-CRYTWDTVRNTNKNVDFKCRI 206

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             D   +   A   + +     +     +     + +SDH  I   + 
Sbjct: 207 RFDRLYLRPAAEDGVPRLRPDGMALLGLEKLECRRYISDHWGIRCQFS 254


>gi|67589620|ref|XP_665425.1| endonuclease/exonuclease/phosphatase [Cryptosporidium hominis
           TU502]
 gi|54656109|gb|EAL35196.1| endonuclease/exonuclease/phosphatase [Cryptosporidium hominis]
          Length = 507

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 64/210 (30%), Gaps = 18/210 (8%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++  +++N   L  +        +   T+     +    + ++ADI+ LQE+      
Sbjct: 9   PDRISFLTFNAGLLEYRICGVKLYQNPPYTSHRLLQIPSALRGINADIIALQEVFDEKHS 68

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDI-----------HTAIAVRKKNVRVLQQSYP 129
             +         Y          + S               H  + V  K   +  +   
Sbjct: 69  DYIIESLQPVYPYFARESKQSQNQKSMRWQPISVIHNQLALHNGLLVLSKYPILNARFTC 128

Query: 130 LLGAKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                       ++  +E+ +++ G     + + +IH+ S     ++        +L ++
Sbjct: 129 FSDVTLIEEWFVSKGMLEVTIQLPGMDKSPLTLFNIHMASG----AVNPESETIETLRNK 184

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           + + L              VI GD N   N
Sbjct: 185 EIEQLLGACDHAIRRGEVPVIIGDLNAAPN 214


>gi|290562880|gb|ADD38834.1| DNA-apurinic or apyrimidinic site lyase [Lepeophtheirus salmonis]
          Length = 317

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 75/301 (24%), Gaps = 72/301 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN+              +  R       L    +    DI  LQE          
Sbjct: 61  LKITSWNV--------------AGVRAWIKKGSLSYLLETEKPDIFCLQETKCSET---- 102

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                 C     +   +     +  + ++ +A+  K   +  Q        D   R    
Sbjct: 103 ---KIPCELKELKDYPHQFWAFAKKEGYSGVALFSKVKPLDVQVGLQSQDHDEEGR---- 155

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +    E      ++L  ++ +        +               L     ++     
Sbjct: 156 -IIIAEFEF----FFLLTTYVPNAGRKLVTLDKRLDW--------DLLLRKKMKELNKKK 202

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GD N                           +  +     +  + K    +  A 
Sbjct: 203 PVIASGDLNVAHTEIDLANPKTNQKNAGFTPEERAGFDDLLSLGFVDTYRKLNPEKTGAY 262

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            +DYF++    ++  + +S                  SDHCPIS
Sbjct: 263 TFWTYMMNARAKNVGWRLDYFLISDRWFESNVCDSV----------IRSKVLGSDHCPIS 312

Query: 300 I 300
           +
Sbjct: 313 L 313


>gi|224011515|ref|XP_002295532.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583563|gb|ACI64249.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 590

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/340 (11%), Positives = 89/340 (26%), Gaps = 55/340 (16%)

Query: 11  FFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           F     +     + R+V++NI     + Q+               +  + +   ++  DI
Sbjct: 235 FITSKPSGGGGARFRIVTYNILAEIYATQQQYPHADLWSLSWDFRFQNIIREIVDVGPDI 294

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVRKKNVRVLQQS 127
           V LQE+ + +  + ++       F    +     S   +      A+  R+    +++  
Sbjct: 295 VCLQEVQADHYESHLYNAMHDAGFEGVFKQKTRQSMGMTGKVDGCALFWRRTKFHLIESY 354

Query: 128 YPLLGA---------KDSFSRAGNRRAVELLVEINGKKIWVLD------------IHLKS 166
                               R+    A+   +  +     V+               +  
Sbjct: 355 SIEFNELAQRQVTQVMGLNPRSEEGAAILSKLSKDNVAQLVVLELAQQSISRSSREPINQ 414

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINYLGNNDD 223
            C  ++   +      +   Q   L   +        + +P +I GDFN   +    +  
Sbjct: 415 VCIANTHLYSNKDYPDVKLWQTLHLLQELETFIMARGTNLPLMICGDFNSTPDTAVYDLL 474

Query: 224 FWKTIDPNDSLIRFPKEKDSRC--------------------------NANKNLRNKIPI 257
             + + P    +    +                                 N  ++ K  +
Sbjct: 475 SRQAVHPGHPDVNLGDDNGPNVLPDIMNITHSHMLGSVYNTVLGEEPKFTNYTMQFKGVL 534

Query: 258 DYFVMDQNAYKFLIQESFSEIL--YNEDDIKSRGKRLSDH 295
           DY        + L      +        D     +  SDH
Sbjct: 535 DYMWYSTQNLRPLSAAPIPDESVLTRYGDALPSTQYSSDH 574


>gi|327470396|gb|EGF15852.1| RgfB protein [Streptococcus sanguinis SK330]
          Length = 271

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 66/277 (23%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREV--LVSEVNDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E     +                +  +   P V+ 
Sbjct: 136 ETEVEGQLLTITSCHLSWWDKGFQGEWAKLEA----------------ELLKVESPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +          F                +SDH  + +
Sbjct: 240 KGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|320011133|gb|ADW05983.1| Endonuclease/exonuclease/phosphatase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 350

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 78/296 (26%), Gaps = 72/296 (24%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L    +     + + + N+N  +     +                 Q      ADI+ L
Sbjct: 124 LLFADKSGAGGDLTVATHNVNAGNPDPAGT----------------AQQVAGSGADILAL 167

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ S            +    +     +  +                    L   YP+ 
Sbjct: 168 QELPSGKV-------EAYEDALADRYPHHSVQGTVG----------------LWSKYPVT 204

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQW 190
            +     + G  RA+   V      + V   HL S    L++         S     A  
Sbjct: 205 DSSPVDIKLGWTRAMSATVTTPRGPVKVYVAHLPSVRVKLNAGFTANQRDDS-----ADA 259

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L + I    E +   V+ GD N  +N         ++++   + +R  +           
Sbjct: 260 LGEAIAD--EPVERVVLLGDLNGTMND--------RSLNAVTAQMRSTQGAAGDGFGFSW 309

Query: 251 LR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   ID  ++                      + +     SDH PI+    +
Sbjct: 310 PASFPMARIDQIMVRG------------VEPRASWTLPATD---SDHLPIAARVQW 350


>gi|86748563|ref|YP_485059.1| endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris
           HaA2]
 gi|86571591|gb|ABD06148.1| Endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris
           HaA2]
          Length = 374

 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/361 (13%), Positives = 98/361 (27%), Gaps = 87/361 (24%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSV---KRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +  + +   ++N+  L   +     K+     ++  +    +    + LDAD++  QE+
Sbjct: 2   PANQRNISFATFNLYNLQLPDQPMYPKSRPYTQEQYDAKIAWIGSMVQRLDADVIAFQEL 61

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               A+   F         S      + K  + + I  A AVRK       + +      
Sbjct: 62  WDRRALEAAF----QAAELSDRYAFAYIKEGAWDGIAVAAAVRKPWEIAGVKRHKAFPQG 117

Query: 135 -----------------------------------------DSFSRAGNRRAVELLVEIN 153
                                                    D      +R  +++ V   
Sbjct: 118 FRLKKRKHTMTALRANPPQADESIVPDENDEFGPSHEDERIDVSISEFSRSPLQVTVTHG 177

Query: 154 GK------KIWVLDIHLKSFCFLDSLENTYSP--------------SCSLLSQQAQWLKD 193
                    I V   HLKS       +  Y                S    + +A  L+ 
Sbjct: 178 TARSPSVPPIQVFCTHLKSKLSTPLDDEEYKDPDIRPHKDALGGALSAIRRTAEAAALRI 237

Query: 194 WI-TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA----- 247
            +    +++  P ++ GD N        +    +      +  R     D+         
Sbjct: 238 ILNDTMRDTDDPTIVLGDVNDGQFSNVLSILSGQPTFRVVAGSRAGARSDAGLYTGVTLQ 297

Query: 248 --------NKNLRN---KIPIDYFVMDQNAYKFLIQE--SFSEILYNEDDIKSRGKRLSD 294
                            +  ID+ ++ +  Y +  +   +F E+ +  D +       SD
Sbjct: 298 QLRSLGDVYYTHEFKNVREVIDHALVSEQFYDYSDKRLWTFREMQFFNDHVAHASHAESD 357

Query: 295 H 295
           H
Sbjct: 358 H 358


>gi|224047139|ref|XP_002192582.1| PREDICTED: LOC90806 protein [Taeniopygia guttata]
          Length = 560

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 55/210 (26%), Gaps = 24/210 (11%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  +   T  +  + Q  K LDAD++ LQE+   +
Sbjct: 180 DFTVMSYNILSQNLLEDNSHLYKHCRQRLLFWTYRFPNILQEIKELDADVLCLQEVQEDH 239

Query: 79  AVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              ++        +   Y                      +    V   ++  PLL   +
Sbjct: 240 YRTEIKSSLESLGYHCEYKMRTGRKPDGCAICFKTSKFSLISSNPVEFFRRDIPLLDRDN 299

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  +             I + + HL                  +   Q   L   I
Sbjct: 300 VGLVLLLQPRFHCKANA---AICIANTHLLYNPRRGD----------IKLTQLAMLLAEI 346

Query: 196 TQKKESLV----PFVIAGDFNRKINYLGNN 221
                       P +I GDFN         
Sbjct: 347 ASVAPRKDGSFCPVIICGDFNSVPGSPLYR 376


>gi|257457228|ref|ZP_05622403.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           vincentii ATCC 35580]
 gi|257445379|gb|EEV20447.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           vincentii ATCC 35580]
          Length = 367

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 92/320 (28%), Gaps = 65/320 (20%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           A+ + ++SWNI               G  +     K    +   + Q  K   AD  F+Q
Sbjct: 63  AKPIDIISWNIGYCGLGAGQDFFMDGGTMVRPADKKEVEENLAGVIQTLKRYPADFYFIQ 122

Query: 73  E----------MGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           E          +    A+++      ++   +    +               +  R    
Sbjct: 123 EMDKASKRSYYIDQTAALSEALGIPLSYTYNFKAAYVPYPIPPIGKVASGVGLFTRYPFT 182

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              + + P+       +    R  +     + +G+++    +HL+++   +         
Sbjct: 183 ETYRFALPVPFKWPVSTVNLKRCMLINRFPLESGRQLVTAVLHLEAYDEGEGKIA----- 237

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----KINYLGNNDDFWKTID-----PN 231
                 Q + + D+I  + E+    +  GDFN+            D+FW           
Sbjct: 238 ------QTKAVADFIRAEYEAGNYVIAGGDFNQIFPGTQLRYPLYDEFWAPGKMIGGILP 291

Query: 232 DSLIRFPKEKDSRCNANKNLRNKI-------------PIDYFVMDQNAYKFLIQESFSEI 278
           D       ++   C  NK                    ID F++  N     +       
Sbjct: 292 DGWQFASDDRVPSCRLNKAPYTSALADENIRKKWPYYVIDGFIVSPNISIVSV------- 344

Query: 279 LYNEDDIKSRGKRLSDHCPI 298
                +      R +DH P+
Sbjct: 345 -----ETLDESFRYADHNPV 359


>gi|190572480|ref|YP_001970325.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
 gi|190010402|emb|CAQ44010.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
          Length = 266

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 83/316 (26%), Gaps = 87/316 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R++S+N N +                 +       + +  DAD++ +QE          
Sbjct: 1   MRIISFNANGIRS---------------AATKGFLDWFRAQDADVLCIQETKAQEDQLSD 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F  +    FY         +       ++ +A+  K       +       D   R  
Sbjct: 46  PMFRPDGHHCFY---------RDAITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRY- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +E     + V+  ++ S    D  +              +WL+  + +   S
Sbjct: 96  --------IEARYGNLSVVSFYIPSGSSGDLRQGFKFEV-------MEWLRPILEEWARS 140

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKD--- 242
              +V+ GD+N   +                     D        +         +    
Sbjct: 141 GRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPEERDWLNALCADHGQATDVTAGRGWAD 200

Query: 243 ------SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                           N+           IDY  +       L   S             
Sbjct: 201 AYRLLNPTGEDYTWWSNRGAARANNVGWRIDYQFITPGLRDRLRSCSI-----------Y 249

Query: 288 RGKRLSDHCPISIDYD 303
           R +R SDH P ++DYD
Sbjct: 250 RDERFSDHAPFTVDYD 265


>gi|332297130|ref|YP_004439052.1| exodeoxyribonuclease III Xth [Treponema brennaborense DSM 12168]
 gi|332180233|gb|AEE15921.1| exodeoxyribonuclease III Xth [Treponema brennaborense DSM 12168]
          Length = 259

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 78/307 (25%), Gaps = 83/307 (27%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-------MGSY 77
           R++SWN+N +   E                    Q+A    ADI+ +QE       + S 
Sbjct: 3   RIISWNVNGIRAAEKKGF---------------LQWAAYSGADIICIQETKARPEQLSSE 47

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                     T+  ++S+ +   +S     +           N     +           
Sbjct: 48  LIAPAAADGRTYKSYWSSAKRPGYSGTAIYSLQEPDSVELMNNPAFDDEGR--------- 98

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                      ++      + V+  +  +     +        C         +  +   
Sbjct: 99  -----------VLAAKYGTLAVISAYFPNSQEAGARLAYKLDFCR-------AMLAFCAD 140

Query: 198 KKESLVPFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDS 243
             ++    V+ GD+N     +                 +  W             ++  +
Sbjct: 141 LVKNGYDIVLCGDYNIAHKPIDLANPKANEGNAGYLPEERAWMDEFTAAGFCDTFRKFCT 200

Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                     +           IDY  +++     ++  +                + SD
Sbjct: 201 DGQQYTWWSYRFHAREKNIGWRIDYQCVNEAFAGKVVASAIL-----------NDVQGSD 249

Query: 295 HCPISID 301
           HCPI ++
Sbjct: 250 HCPIVLE 256


>gi|320011244|gb|ADW06094.1| Endonuclease/exonuclease/phosphatase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 253

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 64/279 (22%), Gaps = 52/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N+                     D   L +  +    D+V +QE   +    K 
Sbjct: 21  IRVLSYNVR----------------SMKDDTEALARVVRACAPDLVCVQEAPRFFRWRKA 64

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +               +           + +      V +    LL       R   R
Sbjct: 65  AARLAAMTDLVMLSGGATAAG--------PLLLCSLRATVERTEDVLLPLTPGLHR---R 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V I G ++ V+  HL             S        QA  L D I        
Sbjct: 114 GLATAVVRIAGARLGVVSCHL-------------SLQREERRSQAGLLLDRIDAMGVPHA 160

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V+AGD N             +                           +  ID     
Sbjct: 161 --VVAGDLNDVPEGSAFRQLAGRL------QDCRVVRPWGGELTFPPGSPRKRIDAVFAT 212

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                               D+    +  +DH P+    
Sbjct: 213 GGIEVLGCGVPADLPGVTGADL----RAATDHLPVLAAL 247


>gi|21674945|ref|NP_663010.1| AP Xth family endonuclease [Chlorobium tepidum TLS]
 gi|21648175|gb|AAM73352.1| AP (apurinic or apyrimidinic) endonuclease, xth family [Chlorobium
           tepidum TLS]
          Length = 253

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 75/304 (24%), Gaps = 76/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + +WNIN                   +    L  +  +   DIV L+E+      A+V
Sbjct: 1   MNIFTWNING----------------IRARKEALAAWLDSRKPDIVVLEEIK-----AQV 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++  R   +            + VR         S      +       NR
Sbjct: 40  SEIPETIRDFAGYRKFWNGSTFKKGYSGVGLLVR-------DGSLDEFTCEPPPFDIENR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + ++  +  ++  ++                 ++  +    LK +I +      
Sbjct: 93  -----TLVLHAPQFTLIGTYVPRG--------DGEERYAVKLRYLADLKAFIAELLTEGR 139

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N  +                         +       L    +    + +  
Sbjct: 140 EVILLGDINVALRDIDVHRSQNKPGAIGLRPEERAAIEAHLGLGLLDIVRELNPDKKDLF 199

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N            ID   +     + +   S               ++ SDH P+S
Sbjct: 200 TWWPNWKFARERNLGWRIDCIYLTPALARKVSGVSV-----------DLDEKSSDHAPVS 248

Query: 300 IDYD 303
           +   
Sbjct: 249 VKLS 252


>gi|316968638|gb|EFV52896.1| endonuclease/exonuclease/phosphatase family protein [Trichinella
           spiralis]
          Length = 644

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 94/322 (29%), Gaps = 52/322 (16%)

Query: 24  VRLVSWNINTLS--------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            RL+S+NI   S        +Q          +R      LL +      ADI+ LQE+ 
Sbjct: 262 FRLLSYNILAGSYLALKLPKDQLYFPYCPVEYQRDDYRIPLLMKQIPGYKADIMCLQEVE 321

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDS-----------NNDIHTAIAVRKKNVRVL 124
               +  V     +     +          +              I +  A+     +  
Sbjct: 322 KK--LFSVLWGPYFDKAGYSGVFKLKGGEVAEGLATFFNKEKFIYIDSFDALLSDLAKSD 379

Query: 125 QQSYPLLGAKDSFSRAGNRR------AVELL----VEINGKKIWVLDIHLKSFCFLDSLE 174
           +Q +  +    + ++   +       A+++     + +  K I + + HL S    D + 
Sbjct: 380 KQEFKWIPNCLNKNQEALKYFMSRPQALQVTAFRSILLPDKLICIANTHLHSKGEHDYIR 439

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------GNNDDF 224
              +  C L        K    +  ES +   + GD N   +             +    
Sbjct: 440 LLQTAICILHLN--NVFKSLKEKFPESRIALCLCGDMNSTPDAALHELIEKGTVSSQRTD 497

Query: 225 WKTIDPNDSLIRFPKEKDS---------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
           W+    ++      +             R   N  +     +DY  +++      I   +
Sbjct: 498 WRIKADDEESTIATEVNMPLTLTCVSDVRTFTNVTVNFSACLDYIYVNEELRLSKIYPGY 557

Query: 276 SEILYNEDDIKSRGKRLSDHCP 297
           S++   +          SDH P
Sbjct: 558 SDVAVRQHKAIPSAACPSDHIP 579


>gi|242208449|ref|XP_002470075.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730827|gb|EED84678.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1134

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 104/320 (32%), Gaps = 39/320 (12%)

Query: 9    LVFFLVPCTASVAQKVRLVSWNIN----TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            L    +  T+   +  R++SWN+      L+         +    +    +LLR+     
Sbjct: 808  LPLTSMATTSMATRATRILSWNVETPVPFLNLPPRKVGTSSVPPGS--RLSLLRELIARH 865

Query: 65   D-ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            D  D V LQE+ +  +  +           S       +    N  +          +  
Sbjct: 866  DFPDFVCLQEVRARQSDKEWIVALKAAANKSDSGPKYTAYMSLNRALRGPR--HFGVITY 923

Query: 124  LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH-LKSFCFLDSLENTYSPSCS 182
            ++ ++ +  +++    A  R  + L ++     + V  ++  + F      +N       
Sbjct: 924  VKDAHKIAVSREVDWDAEGRVII-LEMKSGWALLNVYALNGSEYFWRDPLGQNAPKTRNE 982

Query: 183  LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------------YLGNNDDFWKTID 229
                  + L       +   +  V+ GDFN  +              +     +F +   
Sbjct: 983  RKRDFNRLLMQECQAMRARGLRLVLIGDFNISLTKKDCVPRLRTEYPHSLARKEFNEEFI 1042

Query: 230  PNDSLIRFPKEKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
            P   ++   +E   +  A            +   +DY ++ +     +I     E +Y+E
Sbjct: 1043 PTLDVVDVYREVHGQKAAFSWFVKGKPQGADAARVDYALVQRTLMDRVI-----ETMYHE 1097

Query: 283  DDIKSRGKRLSDHCPISIDY 302
            D ++      SDH P+++  
Sbjct: 1098 DSVERAH---SDHAPLTLAL 1114


>gi|254450713|ref|ZP_05064150.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 238]
 gi|198265119|gb|EDY89389.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 238]
          Length = 348

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/328 (12%), Positives = 81/328 (24%), Gaps = 52/328 (15%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74
                  ++ L  WNI                 R+ +   LL         D++ +QE+ 
Sbjct: 31  VPPRAQDRLLLACWNIANFG----------VQNRSDNALDLLAHICGRF--DLIAVQEVN 78

Query: 75  GSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
            +++ +A +      TW    S     +       +            V +  + +P   
Sbjct: 79  ENWHPLADMVKHMGPTWDFIMSDTAGNSERLAFVFDRDRVTPKQLFGEVALRARDFPKRD 138

Query: 133 ---------------AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                            D      +R             + + + HL      +      
Sbjct: 139 VTVHYTYYNKPKSKRFDDLAFEPFDRNPYIGSFACGSVDLTLANCHLYYGKGGNPTTQAK 198

Query: 178 SPSCSLLSQQAQWLKDWITQKKESL----VPFVIAGDFNRK---INYLGNNDDFWKTIDP 230
             + +    +   L  W  ++ +         ++ GD N     +            + P
Sbjct: 199 RQAYARRVMEVHALARWADKRSQKDTTYDQDIILLGDMNVPDMTLKQASYRALIEYGMQP 258

Query: 231 NDSLIRFPKEKDSRCNAN------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                R      S  N                IDY V D +   F       +   + D 
Sbjct: 259 LKYASRVGGSNLSGKNTYDQMAFAPGRLQTRIIDYDVFDFDNAVFAGLWDKLDTTADPDP 318

Query: 285 IKSR---------GKRLSDHCPISIDYD 303
              +            LSDH P+ +  D
Sbjct: 319 NPDKRVSEFRSHVNYHLSDHRPLWVQLD 346


>gi|164448715|ref|NP_001068851.2| sphingomyelin phosphodiesterase 2, neutral [Bos taurus]
 gi|296484135|gb|DAA26250.1| sphingomyelin phosphodiesterase 2, neutral [Bos taurus]
          Length = 423

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 78/296 (26%), Gaps = 42/296 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  +N+N         +   S  R       L  +      D+  L+E+ S      +
Sbjct: 9   LRV--FNLN------CWGIPYLSKHRAD-RVKRLGDFLNMESFDLALLEEVWSEQDFQYL 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFS 138
             K               +    +  I + + V  K+       +               
Sbjct: 60  RQKLL--------PTYPAAHYFRSGIIGSGLCVFSKHPIQEFTQHVFTLNGYPYMIHHCD 111

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +    L++ ++G  +     HL +               +    QA  L  +I   
Sbjct: 112 WFCGKAVGLLVLHLSGLVLNAYVTHLHA-----EYNRQKDTYLAHRVAQAWELAQFIHHT 166

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRN---- 253
            +     ++ GD N     LG      W  +       R  K  +  C            
Sbjct: 167 SKKADVVLLCGDLNLHPKDLGCRLLKEWTGLHDAYLETRDFKGSEEGCTMVPKNCYVKHQ 226

Query: 254 -------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   I IDY +    +  ++  ++F     ++          SDH  +    
Sbjct: 227 ELGPFPLGIRIDYVLYKAVSGLYIFCKTFKTTTGHDPYSGPP---FSDHEALMATL 279


>gi|89256562|ref|YP_513924.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314993|ref|YP_763716.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502683|ref|YP_001428748.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010026|ref|ZP_02274957.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367881|ref|ZP_04983901.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           257]
 gi|254369453|ref|ZP_04985465.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           FSC022]
 gi|290954628|ref|ZP_06559249.1| short chain dehydrogenase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295311920|ref|ZP_06802747.1| short chain dehydrogenase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144393|emb|CAJ79683.1| Exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129892|gb|ABI83079.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253691|gb|EBA52785.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           257]
 gi|156253286|gb|ABU61792.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157122403|gb|EDO66543.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 262

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 90/306 (29%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N N +        W               ++ K  D D + +QE  +       
Sbjct: 2   IKVMTFNANGIRAAARKGFW---------------EWFKTQDVDFLCMQETKAQ------ 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F +    I +         K              KK    + +   L  A D        
Sbjct: 41  FHQLEKDIEHFPTGYYYEFKDAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRY---- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ + +   +  ++L S    D  +           Q  +  K+ + ++ ES  
Sbjct: 97  ------IQFDYENFSIASLYLPSGSSGDVRQ-------EYKMQFLKKYKEILKEQVESGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
            F++ GDFN     +   +                 +   I  +   +   +  +     
Sbjct: 144 DFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQAWLDHIFDDLGWVDTFRVINHEPLQ 203

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY +        ++ ES         D   +    SDH P+
Sbjct: 204 YTWWSNRGQARANNVGWRIDYHISTSALKDKVVPES---------DYVYKENWFSDHAPL 254

Query: 299 SIDYDF 304
           +I+YD+
Sbjct: 255 TINYDY 260


>gi|159901516|ref|YP_001547762.1| hypothetical protein Haur_5004 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894555|gb|ABX07634.1| hypothetical protein Haur_5004 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 335

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 83/338 (24%), Gaps = 61/338 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---NA 79
            + +++WNI  L +     +  +  +   +    +       +ADIV +QE+ S    + 
Sbjct: 3   TITVMAWNIENLGD-----VKLDPNRAGDALVDYIANVVSYNEADIVAIQEVRSNMGADL 57

Query: 80  VAKVFPKN-----------------------TWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           V ++  +                         +   + T ++  +S   +          
Sbjct: 58  VQRLAAELDGYTSPNVWKGQESPQFCNQRLEQYVFLWDTRKVDLYSVAINGTPGSFQYQY 117

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK--KIWVLDIHLKSFCFLDSLE 174
              N     Q   L   K   S      A    V+       + V       +       
Sbjct: 118 ANPNFGQPNQPQWLGFPKQIASNRPPYLAYFQTVQAPNVQIPVAVFHAPGPGYWIGVRDA 177

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                  +  + Q   L        +S     +AG F  +            T    D L
Sbjct: 178 CKNLAQVTEFATQGHSLVIMGDFNVKSDNSVSVAGSFGEQAYGPLAGAAGTFTQLLEDVL 237

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE------------ 282
               K K +            P D   + +N           + L  E            
Sbjct: 238 SSLIKLKSATIGMTIADAYSQPYDTIFLRKNTNNIASLGEGIDELLEESLNGNLSGSLEE 297

Query: 283 ----------------DDIKSRGKRLSDHCPISIDYDF 304
                           D        +SDH PI ++  F
Sbjct: 298 IEGQLNGMKPIYTNPADVFHDYRLYVSDHVPIVVEISF 335


>gi|239631265|ref|ZP_04674296.1| exonuclease III [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239525730|gb|EEQ64731.1| exonuclease III [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 252

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 75/300 (25%), Gaps = 77/300 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                             LDAD   LQE     A    
Sbjct: 1   MKLISWNVNGLRAVLKKEFMT---------------IFNELDADWFCLQETK-MQAGQVE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K+  +       +   D+  R    
Sbjct: 45  LDLPGYHQYFN----------YAERKGYSGTAIFTKHEPLNVTYGMGVPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +++ ++  +        +               L            
Sbjct: 91  ---IITLEYPN--FYLMTVYTPNSGGELKRLDYRQQWDKDFLAYTNQLAA--------KK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P V  GD N     +   +D     +               +   I   +          
Sbjct: 138 PLVYCGDLNVAHQEIDLKNDKTNHHNASFTDEERADFTKQLDSGFIDTFRNLYPDTVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYFV  ++              Y +D         SDHCP+ +
Sbjct: 198 WWSYRFHARANNAGWRIDYFVSSRDFK-----------PYIQDAKILTDIMGSDHCPVEL 246


>gi|325293839|ref|YP_004279703.1| endonuclease/exonuclease/phosphatase protein [Agrobacterium sp.
           H13-3]
 gi|325061692|gb|ADY65383.1| putative endonuclease/exonuclease/phosphatase protein
           [Agrobacterium sp. H13-3]
          Length = 281

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/278 (11%), Positives = 78/278 (28%), Gaps = 53/278 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + S+N++    ++              D     +  + + ADI+ LQE  S         
Sbjct: 49  IASYNVHKCVGRDRRF-----------DPDRTSRVIQEIGADIIALQEADSRFGERTGLL 97

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   S    +        +  H  + + K+       +  L G          R A
Sbjct: 98  DLARLERESGLVPVPVLAGVKAHGWHGNVLLFKEGAVRDVHTLKLPGL-------EPRGA 150

Query: 146 VELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           + + +++ +G  + ++  H                     +QQA+ L   +     +   
Sbjct: 151 LVVELDLKSGGALRIIAAHFGLLRHS-------------RAQQAKALIGLLE--ARNECA 195

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GD N         +         ++L            +  +    + +D  + ++
Sbjct: 196 TILMGDLN---------EWRLGNGSSLNTLRDAFGALPPAVPSFPSNLPVLALDRIIANR 246

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +          E    +  +  SDH P+    
Sbjct: 247 EGLIEQV----------EAHDSALARIASDHLPLKAAI 274


>gi|262037554|ref|ZP_06011013.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           goodfellowii F0264]
 gi|261748484|gb|EEY35864.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           goodfellowii F0264]
          Length = 288

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 90/321 (28%), Gaps = 58/321 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQ-------------KVRLVSWNINTLSEQEGVSLWKNSVK 48
           +R     L+F L+ C                    + + S+N   L E+           
Sbjct: 1   MRNIKRGLIFLLLFCFVFSCNNEKNNNKDSERKGTILIASFNAMRLGEKP---------- 50

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV------FPKNTWCIFYSTERLINHS 102
               +Y +  +       D++ ++E+     + K+           W    S E + + +
Sbjct: 51  ---KNYEVTAKILSKF--DLIGIEEVMHEKGLKKLKAHLIKLTGEEWEYLISDESVGSEN 105

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
            R      +     RKK  + +++   +   K+       R       +        +  
Sbjct: 106 YR-----EYYGYIYRKKKFQEVKK---IGFYKEKNKNEFMREPYGAYFKAGNFDFVYVIC 157

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           H              +   ++                      +IAGDFN   +     +
Sbjct: 158 HSIFGDKEKQRLIEAANYSNVYEYFL---------NISQESDIIIAGDFNTSADSPAFKN 208

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
            F K                S      +       D F+++++  K     ++    + +
Sbjct: 209 LFEKNNVSYLLNPEENLTTISDTRLASSY------DNFLINKDKTKEFT-GNYGVYNFIK 261

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
           D+     K +SDH  I  +Y 
Sbjct: 262 DNNSEIKKYVSDHLLIFSEYS 282


>gi|323350990|ref|ZP_08086647.1| RgfB protein [Streptococcus sanguinis VMC66]
 gi|322122714|gb|EFX94423.1| RgfB protein [Streptococcus sanguinis VMC66]
          Length = 271

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 65/277 (23%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
                 L +       D++ LQE+       +V     +                     
Sbjct: 18  EIKLNQLAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREV--LVSEVNDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E++G+ + +   HL  +      E                      +  +   P V+ 
Sbjct: 136 ETEVDGQLLTIASCHLSWWDKGFQGEWAKLE----------------EELLKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|56708053|ref|YP_169949.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670524|ref|YP_667081.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134301867|ref|YP_001121836.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|187931705|ref|YP_001891689.1| exodeoxyribonuclease III [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|224457140|ref|ZP_03665613.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370539|ref|ZP_04986544.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874855|ref|ZP_05247565.1| xthA, exodeoxyribonuclease III [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604545|emb|CAG45592.1| Exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320857|emb|CAL08975.1| Exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049644|gb|ABO46715.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|151568782|gb|EDN34436.1| hypothetical protein FTBG_00321 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|187712614|gb|ACD30911.1| exodeoxyribonuclease III [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|254840854|gb|EET19290.1| xthA, exodeoxyribonuclease III [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 262

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 90/306 (29%), Gaps = 72/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++N N +        W               ++ K  D D + +QE  +       
Sbjct: 2   IKVMTFNANGIRAAARKGFW---------------EWFKTQDVDFLCMQETKAQ------ 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F +    I +         K              KK    + +   L  A D        
Sbjct: 41  FHQLEKDIEHFPTGYYYEFKDAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRY---- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ + +   +  ++L S    D  +           Q  +  K+ + ++ ES  
Sbjct: 97  ------IQFDYENFSIASLYLPSGSSGDVRQ-------EYKMQFLEKYKEILKEQVESGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNA 247
            F++ GDFN     +   +                 +   I  +   +   +  +     
Sbjct: 144 DFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQAWLDHIFDDLGWVDTFRVINHEPLQ 203

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY +        ++ ES         D   +    SDH P+
Sbjct: 204 YTWWSNRGQARANNVGWRIDYHISTSALKDKVVPES---------DYVYKENWFSDHAPL 254

Query: 299 SIDYDF 304
           +I+YD+
Sbjct: 255 TINYDY 260


>gi|149248640|ref|XP_001528707.1| hypothetical protein LELG_01227 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146448661|gb|EDK43049.1| hypothetical protein LELG_01227 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 390

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 95/318 (29%), Gaps = 47/318 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD---IVFLQEMGSYNA 79
           ++++ + N+   +   G     + +      Y ++    K    D   +V LQE      
Sbjct: 81  QMKIYTHNVRYAAP--GHKRRPHELSWLKRRYGVIAS-IKRHVRDTALLVGLQECKHEQV 137

Query: 80  VAKVFPKNTWCIFY--STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +  +   N     +  S +   + ++    N  +  I     + +           +   
Sbjct: 138 IDILNGLNGLNGLHDLSNDHDSHTNEMQQGNWSYYGIGRDNGHTKGEYAPIFYDKDEWEL 197

Query: 138 SRAGNRRAVELLVEING-------KKIWVLDIHLKSFCFLDSLENTY--SPSCSLLSQQA 188
             A  R      ++ +        + + +     K+   + +  NT+    S        
Sbjct: 198 LNATTRWLSHTPLKPSKFPSAGSKRIVTLTTFKHKNGGQIVNYVNTHLDDRSEKARVFGM 257

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP----------NDSLIRF- 237
           + +  ++ Q   +  P +++GDFN K N         + +            ND +    
Sbjct: 258 KLIMQYVKQ-IPNTHPTILSGDFNSKSNNQVYKLLAAEKLVDTFSEKLGKSNNDPMTLLL 316

Query: 238 -----------PKEKDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDI 285
                      P        +         IDY   M   +   ++          +D++
Sbjct: 317 ELSKTPKSPKSPTLPTLPTFSGFGNATGYTIDYIWNMSPESGIKILGHEV------DDNL 370

Query: 286 KSRGKRLSDHCPISIDYD 303
             +G R SDH P+   + 
Sbjct: 371 FDQGFRFSDHRPVIASFS 388


>gi|199436395|dbj|BAG70947.1| thermostable exonuclease III [Thermoplasma acidophilum]
          Length = 250

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 78/302 (25%), Gaps = 79/302 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +SWN+N L                           K  D   + LQE  + +      
Sbjct: 4   KFLSWNVNGLRAAVKNGA---------------VSVLKQDDYFGIALQETKADST---SV 45

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P+  + + Y         K  S                        +     F     R 
Sbjct: 46  PEEMYHLGYHLYNNPAKKKGYSGTMSLV--------------REKPIAVSYGFENEEGRI 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + +   K + ++++  +     +  +          + +  L+           P
Sbjct: 92  -----LNLEFDKFYFINVYFPNAQHGLTRLDMKLDFGEKFLEYSNELRK--------KKP 138

Query: 205 FVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            +I GDFN     +                   D   K +D           K+    + 
Sbjct: 139 LIICGDFNVAHEEIDIARPKDNENNAGFTKQERDWMTKFLDSGYVDTYRIFMKEGGHYSW 198

Query: 249 KNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            + R           IDYFV+  +    + +    E +             SDH P++++
Sbjct: 199 WSYRFNARAKNIGWRIDYFVVSDDIRDRVKKAEILETVT-----------GSDHAPVTLE 247

Query: 302 YD 303
            D
Sbjct: 248 VD 249


>gi|296198965|ref|XP_002747038.1| PREDICTED: sphingomyelin phosphodiesterase 2 [Callithrix jacchus]
          Length = 422

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 72/298 (24%), Gaps = 46/298 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  +N+N         +   S  RT      L  +      D+  L+E+ S      +
Sbjct: 9   LRI--FNLN------CWGIPYLSKHRTD-RMKRLGDFLNKESFDLALLEEVWSEQDFQYL 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFS 138
             K +             +    +  I + + V  K+       +               
Sbjct: 60  RQKLS--------PTYPAAHHFRSGIIGSGLCVFSKHPIQELTQHVYTLNGYPYMIHHGD 111

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +    L++ + G  +     HL +               +    Q   L  +I   
Sbjct: 112 WFSGKAVGLLVLHLRGVVLNAYVTHLHA-----EYNRRKDIYLAHRVAQVWELAQFIHHT 166

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--------- 249
            +     ++ GD N             K            ++       +          
Sbjct: 167 SKKADVVLLCGDLNMHP--EDLGCCLLKEWTGLRDAYLETQDFKGSEEGSTMVPKNCYVN 224

Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     I IDY +  +    F I      +          G  LSDH  +    
Sbjct: 225 QQELKPFPFGIRIDYVLY-KAVSGFYIYC--KSLETTTGYDPHSGTPLSDHEALMATL 279


>gi|116494506|ref|YP_806240.1| exonuclease III [Lactobacillus casei ATCC 334]
 gi|191637944|ref|YP_001987110.1| Exodeoxyribonuclease III [Lactobacillus casei BL23]
 gi|227535523|ref|ZP_03965572.1| exodeoxyribonuclease III [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|116104656|gb|ABJ69798.1| Exonuclease III [Lactobacillus casei ATCC 334]
 gi|190712246|emb|CAQ66252.1| Exodeoxyribonuclease III [Lactobacillus casei BL23]
 gi|227186845|gb|EEI66912.1| exodeoxyribonuclease III [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|327382014|gb|AEA53490.1| Exodeoxyribonuclease III [Lactobacillus casei LC2W]
 gi|327385172|gb|AEA56646.1| Exodeoxyribonuclease III [Lactobacillus casei BD-II]
          Length = 252

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 75/300 (25%), Gaps = 77/300 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                             LDAD   LQE     A    
Sbjct: 1   MKLISWNVNGLRAVLKKDFMT---------------IFNELDADWFCLQETK-MQAGQVE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K+  +       +   D+  R    
Sbjct: 45  LDLPGYHQYFN----------YAERKGYSGTAIFTKHEPLNVTYGMGVPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      +++ ++  +        +               L            
Sbjct: 91  ---IITLEYPN--FYLMTVYTPNSGGELKRLDYRQQWDKDFLAYTNQLAA--------KK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P V  GD N     +   +D     +               +   I   +          
Sbjct: 138 PLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQLDSGFIDTFRNLYPDTVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYFV  ++              Y +D         SDHCP+ +
Sbjct: 198 WWSYRFHARANNAGWRIDYFVSSRDFK-----------PYIQDAKILTDIMGSDHCPVEL 246


>gi|50414810|ref|XP_457434.1| DEHA2B11044p [Debaryomyces hansenii CBS767]
 gi|49653099|emb|CAG85438.1| DEHA2B11044p [Debaryomyces hansenii]
          Length = 306

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/279 (12%), Positives = 80/279 (28%), Gaps = 27/279 (9%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + + NI   +    +   +   KR      L+ ++++++   +V LQE+        +  
Sbjct: 53  IYTHNIRQEN-NNMMKGEEPWSKRKVGVIGLINKHSQSI-PTLVGLQEVKQNQLNDILQG 110

Query: 86  -KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               W  F             +     T                P    K  +  A  R 
Sbjct: 111 LGKPWTFFGVGRDDGKSKGEFAPILYKTDEWDLVSGKTYWLGENPNQPTK-GWDAAFPRI 169

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              ++++ + K   V++     +          S                I    ++   
Sbjct: 170 VTVVVMK-HKKSGKVVNYLNTHYDHKGKKARENSS------------LQIIDLMSKTEGT 216

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            +++GDFN + +         K++                C   +   ++  ID+    +
Sbjct: 217 SLLSGDFNSQEHE-EAYQTLSKSLLDTSCNCHERCGFKDTCTGFEKGGSESSIDFIWTTK 275

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        + +   D +  G   SDH P++  ++
Sbjct: 276 ---------GVPIVKHEIIDHECNGSYCSDHRPVTAIFE 305


>gi|62085782|gb|AAX63282.1| DNA lyase [Beauveria bassiana]
 gi|62085784|gb|AAX63283.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 69/303 (22%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGVLCPPKSNTPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I          V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAVGKQVVLAGDLNIIRGEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +                            +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVFGDRDDDRERAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|312904593|ref|ZP_07763751.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0635]
 gi|310632106|gb|EFQ15389.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0635]
 gi|315577355|gb|EFU89546.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0630]
          Length = 351

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLEARFPIKGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|257089438|ref|ZP_05583799.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|256998250|gb|EEU84770.1| conserved hypothetical protein [Enterococcus faecalis CH188]
          Length = 358

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLEARFPIKGTDKELVVFNLHLEAYDNGEG------- 232

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 233 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADLPK 290

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 291 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 346

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 347 --------DHQPVKME 354


>gi|256617953|ref|ZP_05474799.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis ATCC
           4200]
 gi|256597480|gb|EEU16656.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis ATCC
           4200]
          Length = 358

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLEARFPIKGTDKELVVFNLHLEAYDNGEG------- 232

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 233 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADLPK 290

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 291 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 346

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 347 --------DHQPVKME 354


>gi|118102264|ref|XP_001232516.1| PREDICTED: hypothetical protein isoform 1 [Gallus gallus]
          Length = 410

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 73/271 (26%), Gaps = 33/271 (12%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
            K+      L+         D+V LQE+ S    + +  K   C  +S            
Sbjct: 23  SKQRQERIRLIGDRLCQEGFDLVLLQEIWSERDYSDLKAKLGGCCPFS--------HYFR 74

Query: 107 NNDIHTAIAVRKKNVRVLQQSYP-----LLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           +  I + + V  K   +    Y                   +    ++V I      +  
Sbjct: 75  SGVIGSGLCVFSKFPILDTLLYQYSLNGYPYMLQHGDWFCGKSVGLVVVRIAEITFNIYV 134

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            HL +                    QA  L  +I    ++    ++ GD N     +G  
Sbjct: 135 THLHA-----EYSREKDAYLPHRVVQAWELAQFICHTAKAADVVLLGGDLNMHPGDVGVR 189

Query: 222 DDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PIDYFVMDQNAYKF 269
               W  +    +  +  +  +  C    N    +            IDY +  +    F
Sbjct: 190 LLRGWTGLHDAFTEAKHFEGCEDGCTLIPNNCFTVKSELQPFPLGIRIDYILY-KAVSSF 248

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            ++    E+      +       SDH  +  
Sbjct: 249 TVKC--EELRTTTGTVPGMDIPYSDHEAVMA 277


>gi|84622132|ref|YP_449504.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84366072|dbj|BAE67230.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 266

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 84/313 (26%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +                +    DAD++ +QE  +     ++
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQETKAQE--HQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +         +  S    ++ +A+  ++     ++       D   R    
Sbjct: 44  AGPD-----FLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E       V+  ++ S    +  +           Q  QWL+  + +   S  
Sbjct: 96  ------IEARFGNRSVVSFYIPSGSSGELRQGYK-------FQVMQWLRPILDEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN-----------------DSLIRFPKEKDSRCN 246
            +V+ GD+N     L   +      +                   +              
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADVPEDANAAEGRGWVDSY 202

Query: 247 A--------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       L   S             R 
Sbjct: 203 RVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPGLRDTLRACSI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 ERFSDHAPYIVDY 264


>gi|301096360|ref|XP_002897277.1| exodeoxyribonuclease [Phytophthora infestans T30-4]
 gi|262107161|gb|EEY65213.1| exodeoxyribonuclease [Phytophthora infestans T30-4]
          Length = 362

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 68/277 (24%), Gaps = 48/277 (17%)

Query: 20  VAQKV--RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-S 76
            A  +  ++V+WN+N L          +           LR Y    D DI  L E    
Sbjct: 104 SADDIDTKIVAWNVNGLRAVLKRDESVH-----------LRAYVAQEDPDIFCLSETKIC 152

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            + + K+               I      +     T     K  + V       +    +
Sbjct: 153 RDELQKLEDFLPQYEHQYWSCAIKKGYASTAIFTKTKPLSVKDEIVVGDHDSKGVAKSAN 212

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             +    R + L       K W++  ++ +                  + Q         
Sbjct: 213 GGKDQEGRFLALEFP----KFWLVHTYVPNAGG-------KLERLDFRTTQWDKAMHREM 261

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKD 242
           ++ E   P +  GD N     +  ++                       D  +   +   
Sbjct: 262 KEMEKTKPVIWCGDLNVAHQEIDIHNPKGNHKSAGFTDEERESFGEILEDGFVDTFRHLH 321

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270
                      +           +DYFV+ +     +
Sbjct: 322 PDTVEYSYFGYRHNMRAKNKGWRLDYFVVSEKLLPHV 358


>gi|257415059|ref|ZP_05592053.1| endonuclease/Exonuclease/phosphatase [Enterococcus faecalis
           AR01/DG]
 gi|257156887|gb|EEU86847.1| endonuclease/Exonuclease/phosphatase [Enterococcus faecalis
           ARO1/DG]
          Length = 198

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 55/211 (26%), Gaps = 37/211 (17%)

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           +      + +     + H   AV  +                S   A  R  +   +   
Sbjct: 21  TMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVSVDGAEKRGVLYCRIVPP 75

Query: 154 --GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
             GK I V+ +HL                 +    Q   L +W+ +      P ++AGDF
Sbjct: 76  MTGKAIHVMCVHLGLR-------------EAHRQAQLAMLAEWVNE-LPDGEPVLVAGDF 121

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N       +       +D       F +               + +D   +   +     
Sbjct: 122 NDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPLLRLDRIYVKNASAS--- 173

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                             + LSDH P+S + 
Sbjct: 174 --------APTALPLRTWRHLSDHAPLSAEI 196


>gi|284033091|ref|YP_003383022.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283812384|gb|ADB34223.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 355

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/292 (11%), Positives = 69/292 (23%), Gaps = 43/292 (14%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-- 73
             A  ++ + ++  N+   +                +D   +    +    D+V L E  
Sbjct: 94  PPAPGSRAMTIMVANVLGGA----------------ADPAEVAHLIRAHRPDLVSLPEAQ 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRD---SNNDIHTAIAVRKKNVRVLQQSYPL 130
           +     +        +  +         S      S             +   +  + P 
Sbjct: 138 VEIRQKIQAELGGLGYNGYTVQANSAVESATSVLVSATLGKVTFGADTLDPGRVNAALPS 197

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   R G    VE      G  +                     P  +   Q    
Sbjct: 198 AEPATGDPRPGRAGVVEQTTTRFGHIVVTGGTLGDLRLIAYHGFPPLPPEVTTWKQDLDV 257

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L+ W        VP ++AGDFN   ++    D   +        +    E  +       
Sbjct: 258 LRTWCA----GDVPTIVAGDFNATTDHADFRDALGRNCRSVGPAV---GEGLNGTWPADR 310

Query: 251 LR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +  ID+ V                       +++   + SDH  +   
Sbjct: 311 PALFRTVIDHVVTGPGVEPS--------------RLRTYHLQGSDHRAVIAT 348


>gi|45934804|gb|AAS79468.1| conserved hypothetical protein [Streptomyces bikiniensis]
          Length = 487

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/296 (10%), Positives = 73/296 (24%), Gaps = 68/296 (22%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L      +    +    + LVS N+   +     +                 +      A
Sbjct: 252 LTAFGGALTDKTTPGGDLTLVSHNVEQANPDPAGT----------------VRSLLAAGA 295

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ L+E+    A                      ++    +     + +   +     +
Sbjct: 296 DVLALEELSPATA---------------PAYERALAESYPYHFYEGTVGLWSVHPLSDAR 340

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           + P++             A+   V+  G  + V   HL S           +   +L   
Sbjct: 341 AVPIMPWTR---------AMRATVDAPGGPLAVYVAHLPSVRVGPGGFTAGARDEALGLL 391

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            A+        + E +   V+ GD N   +         + +    +             
Sbjct: 392 AAEV-------RAEPVRRVVLLGDLNGSTDDRALRPLTDRLVSAQAAAGAGFGFT----- 439

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   + ID  ++       +   S   +              SDH P++   
Sbjct: 440 -WPARLPVVRIDQILLGG-----VRAASAWTLPAT----------ASDHLPVAARI 479


>gi|225552135|ref|ZP_03773075.1| exodeoxyribonuclease III [Borrelia sp. SV1]
 gi|225371133|gb|EEH00563.1| exodeoxyribonuclease III [Borrelia sp. SV1]
          Length = 255

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ K    DI+ +QE  +    + K
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVKEYTPDILCIQETKALREQLPK 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +    +       
Sbjct: 46  DLILENYYSYFSKSKIKGYSGVCIYSK---------------VEPISVRLLGEEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  V            +++ +  +   L           S +   A  L           
Sbjct: 91  RGLVAC-----YDDFILVNGYFPNSQVLRRRLGYKLDFLSYVENLADSL-------VCDG 138

Query: 203 VPFVIAGDFNRKIN------------YLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNAN 248
              VI GDFN                  G   +    +D   N   +   +  +      
Sbjct: 139 KNVVICGDFNIAHTEIDLISPDSNRESPGYYIEETTWLDDFLNKGYVDTFRIFNKDPGYY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLILDKV-----------MGSDHCPVF 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEL 250


>gi|139474462|ref|YP_001129178.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes str. Manfredo]
 gi|134272709|emb|CAM30981.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes str. Manfredo]
          Length = 272

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 81/307 (26%), Gaps = 65/307 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++++ N +                 T      L ++      DI+ LQE+          
Sbjct: 3   KVLTLNTH-----------SWMQANTLKKLVALAEHILAEKYDIICLQEINQLIESELAT 51

Query: 85  PKNTWCIF----------------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +                                        +  H  +A+  K   
Sbjct: 52  DLPRYQALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYHEGVAILSKQPI 111

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L+ A    +    RR++     ++GK++ V+++HL  F               
Sbjct: 112 --HVSDILVSAMADETNYHTRRSLIAKTRLDGKEVAVVNVHLSWFDKG------------ 157

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    +    +      P ++ GDFN   +  G        +D  DS         
Sbjct: 158 ----FLGEWEKLEKELLTLNCPLLLMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFG 213

Query: 243 SR---CNANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 + +    NK  +  D+    ++      + +F                +SDH  
Sbjct: 214 DHSIVADIDGWQGNKEALKVDHVFTSKDFIIRSSKTTFE---------GGDAPVVSDHYG 264

Query: 298 ISIDYDF 304
           + +  D+
Sbjct: 265 LEVTLDW 271


>gi|209560115|ref|YP_002286587.1| hypothetical protein Spy49_1635c [Streptococcus pyogenes NZ131]
 gi|209541316|gb|ACI61892.1| hypothetical protein Spy49_1635c [Streptococcus pyogenes NZ131]
          Length = 272

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 80/307 (26%), Gaps = 65/307 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++++ N +                 T      L ++      DI+ LQE+          
Sbjct: 3   KVLTLNTH-----------SWMQANTLKKLVALAEHILAEKYDIICLQEINQLIESELAT 51

Query: 85  PKNTWCIF----------------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +                                        +     +A+  K   
Sbjct: 52  DLPRYQALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPI 111

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L+ A D  +    RR++     ++GK++ V+++HL  F               
Sbjct: 112 --HVSDILVSAMDDETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKG------------ 157

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    +    +        ++ GDFN   +  G        +D  DS         
Sbjct: 158 ----FLGEWEKLEKELLTLNCALLLMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFG 213

Query: 243 SR---CNANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 + +    NK  +  D+    ++      + +F                +SDH  
Sbjct: 214 DHSIVADIDGWQDNKEALKVDHVFTSKDFIIRSSKITFE---------GGDAPVVSDHYG 264

Query: 298 ISIDYDF 304
           + +  D+
Sbjct: 265 LEVTLDW 271


>gi|149639454|ref|XP_001506990.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit
           6-like [Ornithorhynchus anatinus]
          Length = 606

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/345 (11%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 237 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 296

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +         I     V+K  V   Q 
Sbjct: 297 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKIEKFTLVQKHTVEFNQV 356

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 357 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGLKPIQAADKQLLIVANAHMHWDP 416

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLV------PFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +  S        P V+  D N   +         
Sbjct: 417 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTTDLNSIPLVLCADLNSLPDSGVVEYLSN 476

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 477 GGVADNHKDFKELRYNECLMNFSCNGKNGTSEGRITHGFQLKSAYENNLMPYTNYTFDFK 536

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 537 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 581


>gi|94995179|ref|YP_603277.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10750]
 gi|94548687|gb|ABF38733.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10750]
          Length = 279

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 80/307 (26%), Gaps = 65/307 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++++ N +                 T      L ++      DI+ LQE+          
Sbjct: 10  KVLTLNTH-----------SWMQANTLKKLVALAEHILAEKYDIICLQEINQLIESELAT 58

Query: 85  PKNTWCIF----------------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +                                        +     +A+  K   
Sbjct: 59  DLPRYQALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPI 118

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L+ A    +    RR++     ++GK++ V+++HL  F               
Sbjct: 119 --HVSDILVSAMADETNYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKG------------ 164

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    +    +      P ++ GDFN   +  G        +D  DS         
Sbjct: 165 ----FLGEWEKLEKELLTLNCPLLLMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFG 220

Query: 243 SR---CNANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 + +    NK  +  D+    ++      + +F                +SDH  
Sbjct: 221 DHSIVADIDGWQGNKEALKVDHVFTSKDFIIRSSKITFE---------GGDAPVVSDHYG 271

Query: 298 ISIDYDF 304
           + +  D+
Sbjct: 272 LEVTLDW 278


>gi|4106095|gb|AAD02702.1| apurinic/apyrimidinic endonuclease [Cricetulus griseus]
          Length = 317

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 72/303 (23%), Gaps = 74/303 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +++ SWN++ L                         + K    DI+ LQE         
Sbjct: 60  TLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQETKCSE---- 100

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              K    +         +    S+ + ++ + +  +   +        G  +       
Sbjct: 101 --NKLPAELQDLPGLTHQYWSAPSDKEGYSGVGLLSRQCPLKVS----YGIGEEEHDQEG 154

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  V            ++  ++ +                   +  + L         S 
Sbjct: 155 RVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDKAFCKFLKDLA--------SR 201

Query: 203 VPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCN 246
            P V+ GD N     +   +                 F + +        F     +   
Sbjct: 202 KPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLYPNTPY 261

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A                  +DYF             S S +    D         SDHCP
Sbjct: 262 AYTFWTYMMNARAKNVGWRLDYF-----------LLSHSLLSSLCDSKIRSKALGSDHCP 310

Query: 298 ISI 300
           I++
Sbjct: 311 ITL 313


>gi|156096975|ref|XP_001614521.1| endonuclease/exonuclease/phosphatase domain containing protein
           [Plasmodium vivax SaI-1]
 gi|148803395|gb|EDL44794.1| endonuclease/exonuclease/phosphatase domain containing protein
           [Plasmodium vivax]
          Length = 660

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 95/352 (26%), Gaps = 68/352 (19%)

Query: 18  ASVAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            S    +R++++NI          + +           +T     LL       D DI+ 
Sbjct: 310 PSSDNVIRILTYNILAPIYTNTKYALEYMFKNIDPCYLKTNYRSHLLIHDIS-YDYDIIC 368

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSY 128
           LQE+ S +  + +F       FYS+ +  N       S        A+ +       Q  
Sbjct: 369 LQEV-SEHLHSNLFSVYLHDEFYSSYKPKNSYGNDGCSLFVNKKKFALIEYKNYEFNQVV 427

Query: 129 PLLGAKDSFSRA------------GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            L   KD +                 +   ++ +  +     V  +    F F     + 
Sbjct: 428 KLPELKDVYDAFIQSGNDLEEIIREIKTVFQVGIYTHRSSTNVFLVANTHFYFHSLASHI 487

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------------ 218
            +     L    + LK    QK    V  V+ GDFN                        
Sbjct: 488 RALQSYSLLHILETLKRVYEQKCGKTVYVVLNGDFNTNFESEVFSFLEGKDIESDSNLWI 547

Query: 219 ------GNNDDFWKT--------------------IDPNDSLIRFPKEKDSR-CNANKNL 251
                    DD  K                     +D    L  +   K       N N 
Sbjct: 548 NSKLFKKEYDDLNKYPTLFDLAKNGPNKEQIVGPHLDRKKFLPLYSAYKKGDIAYTNWNN 607

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +DY  +        + +   + ++++          SDH  I+ + +
Sbjct: 608 NFIDVLDYIFLSPGLKVRRVLKGIDKGIFDKYKGVLSPINPSDHISIAAEVE 659


>gi|159042976|ref|YP_001531770.1| endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae DFL
           12]
 gi|157910736|gb|ABV92169.1| endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae DFL
           12]
          Length = 236

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 75/280 (26%), Gaps = 55/280 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +  L SWNI     ++                    +    LDADI+ LQE         
Sbjct: 2   EFTLASWNIRAGLGRD-----------LRRRPLRTIEVITGLDADILVLQEAD------- 43

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +       +    I   +          +      V            +        
Sbjct: 44  FRMQPRPAALPAPRGRIGPFRVIDLTPDAVGLGWHGIAVLKHPAVKVDGIRRYDLPALEP 103

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV + + +    + V+ +HL                 + +++Q   L           
Sbjct: 104 RGAVVVDIRVRQCPLRVVGVHLGLLRG------NRRKQIAYIAEQLAALDQ--------- 148

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P +IAGDFN            W+     ++L  + +   S        R  + +D   M
Sbjct: 149 RPTIIAGDFNE-----------WRERKGLETLPDWLR-THSPGPTFPAGRPLLKLDKIAM 196

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +            ++ +        K  SDH PI   +
Sbjct: 197 SHDIT----------LMDSVVVGDPAAKVASDHRPIWARF 226


>gi|159113893|ref|XP_001707172.1| Endonuclease/Exonuclease/phosphatase [Giardia lamblia ATCC 50803]
 gi|157435275|gb|EDO79498.1| Endonuclease/Exonuclease/phosphatase [Giardia lamblia ATCC 50803]
          Length = 322

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 76/277 (27%), Gaps = 43/277 (15%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAV-----AKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
           L+ +    + DIV   E    ++       K   ++     Y+  +   H    S     
Sbjct: 57  LKDFIHKKNPDIVCFSETKLGSSAFAAFMEKEATRDPDTGVYTVMKGYKHVFCCSTAKQG 116

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
            A         V       +   D    +  R  + + +  + + I V   +        
Sbjct: 117 YASTAMFAKESVPVLDL-CMQMGDPEFDSEGRF-LHVSL-PSFELIHVYAPNSGRGSSGK 173

Query: 172 SLENTYSPS-CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------- 217
           +  +   P+  S   +  + +  +I     +    V  GD N   N              
Sbjct: 174 AFTSKNRPANLSTRIKYEKLISKYIGNLVAAGKDVVYCGDLNVAHNEIDLYNPKSNHFSP 233

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--------IPIDYFVMDQNA 266
                  + F K +D +  +  F      R N +                IDYFV+    
Sbjct: 234 GFTDEERNAFSKLLDGHGLIDAFRAMHPHRINYSWFSNFGRAREQKHGWRIDYFVVTSKI 293

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +K +             DI       SDH PI +   
Sbjct: 294 FKRVT----------TVDILDDYNSYSDHVPIIMTLT 320


>gi|262202978|ref|YP_003274186.1| endonuclease/exonuclease/phosphatase [Gordonia bronchialis DSM
           43247]
 gi|262086325|gb|ACY22293.1| Endonuclease/exonuclease/phosphatase [Gordonia bronchialis DSM
           43247]
          Length = 318

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 86/318 (27%), Gaps = 81/318 (25%)

Query: 1   MIRKYVLALVF------------FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48
           + R ++LA                 V  +A   Q + +VS N+                 
Sbjct: 60  LRRWFMLAFAVCATVALIMTQAPLWVAHSAPSGQPITVVSANLLF--------------- 104

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
              +D   L +     DAD+V LQE+ +  A+A++                   +     
Sbjct: 105 -GEADVDALSKLIAESDADLVSLQEV-TPEALARIRGSQIVRQL--------PHEYAIPY 154

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
            +    A+  +       +       +          +    ++ G     + + +    
Sbjct: 155 PLAAGTALLSRTPLTEPFNIDGTVLHN----------LAASTDLPGAPGTRV-LAVHPGA 203

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
            LD   + +     +L+   + L            P ++AGDFN   +     +  ++ +
Sbjct: 204 PLDGKADVWVRDMDILTAHLRSL---------PAGPVIVAGDFNVTWD-----NARYRAL 249

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                     +            R        ID+ +                  +    
Sbjct: 250 LDLGFADAAEQAGAGFLPTYPTDRFGGQPVVAIDHVITRG---------------FVATS 294

Query: 285 IKSRGKRLSDHCPISIDY 302
           +++     SDH  + +  
Sbjct: 295 MRTAALPGSDHRAVVVTL 312


>gi|156052389|ref|XP_001592121.1| hypothetical protein SS1G_06360 [Sclerotinia sclerotiorum 1980]
 gi|154704140|gb|EDO03879.1| hypothetical protein SS1G_06360 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 311

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 74/292 (25%), Gaps = 29/292 (9%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVA 81
            +R+++ NI   +E       +    R+    + L     +   +  + LQE+     V 
Sbjct: 30  PIRVITHNIRYATESP-FKGEELWSIRSPRLCSEL--IFNSTVPETFICLQEVLHSQLVD 86

Query: 82  -----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                   P   W            S   S      A+              P       
Sbjct: 87  IHDVLNEGPGYKWSRLGVGRDDGKQSGEYSPIFYRPAVWDLVLYKTYWLSETPD-KPSFG 145

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +     R     +         V+ +        +S   +   S  L+ ++    K+   
Sbjct: 146 WDAGCIRLVTLGIFRHRLTNEIVVVMSTHL---DNSGPISRQKSAELILEKVNHYKNAYA 202

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD-SRCNANKNLRN-- 253
                L      GDFN   +          T    D     P+ K         +     
Sbjct: 203 PAALLLA-----GDFNSPPDDEAYKTMTSSTSTMADIRDLVPEVKRYGNEMTFTSFGYVD 257

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+    ++        +     Y+++        LSDH  +  D +
Sbjct: 258 NTPSRIDFIFSAKDTMAKYGIYAVLSNRYDDEV------YLSDHRAVVADIE 303


>gi|116669682|ref|YP_830615.1| exodeoxyribonuclease III Xth [Arthrobacter sp. FB24]
 gi|116609791|gb|ABK02515.1| exodeoxyribonuclease III Xth [Arthrobacter sp. FB24]
          Length = 273

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 82/307 (26%), Gaps = 65/307 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R+ S N+N L                      + ++ +  + DI+ LQE+ + + + 
Sbjct: 4   DHLRIASVNVNGLRAAYRNG---------------MAEWLEPREVDILCLQEVRAPDKIV 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      W + +                    +A+  +   +  + +       +  R  
Sbjct: 49  RELLGEGWFVLHEEAEAKG----------RAGVAIASRTEPLATRPHIGDDYFATAGRWV 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                         ++ V+  ++ S       ++          +    +++ + +  + 
Sbjct: 99  EADFRLTDAAGAPVQLTVVSAYVHSGEAGTPKQDDK-------FRFLDVMENRLPELAKH 151

Query: 202 LVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRC 245
               ++ GD N     L   +                 F +    +       +      
Sbjct: 152 SDHALVVGDLNVGHTELDIKNWKGNVKRAGFLPEERAYFDRFFGEDIGWRDVHRGLAGNV 211

Query: 246 -NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           IDY +            + + I    D   S   R SDH
Sbjct: 212 DGPYTWWSQRGKAFDTDTGWRIDYHM-------ATPALAAAAISATVDRAPSWDTRFSDH 264

Query: 296 CPISIDY 302
            P+ +DY
Sbjct: 265 APLVVDY 271


>gi|302762180|ref|XP_002964512.1| hypothetical protein SELMODRAFT_81439 [Selaginella moellendorffii]
 gi|300168241|gb|EFJ34845.1| hypothetical protein SELMODRAFT_81439 [Selaginella moellendorffii]
          Length = 540

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/358 (11%), Positives = 94/358 (26%), Gaps = 98/358 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VS+N+N L  +   +               LR +  +LDADI+ LQE  +      A
Sbjct: 1   MRIVSYNVNGLRARLSPA-------------RSLRAFLDSLDADIICLQETKIRRQELTA 47

Query: 82  KVFPKNTWCIFYS-----TERLINHSKRDSNND---------------IHTAIAVRKKNV 121
            +     +  F S      +  + +S   +                    T +    +  
Sbjct: 48  DIATPQGYESFISCTRTVKKGRLGYSGVATFCKVECGNNVALPVAAEEGFTGLLTSARAG 107

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVE------LLVEINGKKIWVLDIHLKSFCFLDSLEN 175
              ++ +              R+ +         +  +     + +I+  +    D+   
Sbjct: 108 EGDKEFWLGSYDPVLTVEGFTRQELLDLDNEGRCIVTDHGHFVLFNIYGPNVGCGDAERQ 167

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI------------NYLGNNDD 223
            +  +        + L+  +    +     +I GD N               +   +   
Sbjct: 168 DFKLNF------YKVLQCRLESILKQGRRIIIVGDLNISPYPIDSCDPGPEFDTSPSRQW 221

Query: 224 FWKTI-------DPNDSLIRFPKEKDSRCNANKN----LRNKIPIDYFVM---------D 263
           F   +            +    + +   C +  +          ID+ ++          
Sbjct: 222 FRSLLVSEGGAFSDAFRVFHPERAEAYTCWSQASGAEEFNYGSRIDHVLIAGPCAGHCQS 281

Query: 264 QNAYKFLIQE---------------SFSEILYNEDDIKSRGKRL----SDHCPISIDY 302
            +                        F     +     S G+ L    SDH P+ +  
Sbjct: 282 PDGSHDNSSCDGFAKCGTDMCDILLEFKRAKLDTLPRWSGGRSLKLDGSDHAPVILQL 339


>gi|3036809|emb|CAA18499.1| putative protein [Arabidopsis thaliana]
 gi|7270557|emb|CAB81514.1| putative protein [Arabidopsis thaliana]
          Length = 641

 Score = 68.0 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/326 (11%), Positives = 93/326 (28%), Gaps = 67/326 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++V++N+N L              +  S +  L +   + DADI+  QE  +      A
Sbjct: 1   MKIVTYNVNGLR-------------QRVSQFDSLLKLLDSFDADIICFQETKLRRQELTA 47

Query: 82  KVFPKNTWCIFYSTERLI-----NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +   + +  F+S  R        +S   +   + +A +  +  + V  +         +
Sbjct: 48  DLAIADGYESFFSCTRTSEKGRTGYSGVATFCRVKSASSSCETALPVTAEEGITGLVNSN 107

Query: 137 FSRAGNRRAVELL------------VEINGKKIWVLDIHL-KSFCFLDSLENTYSPSCSL 183
                +  +                ++  G+ +     H      +        +     
Sbjct: 108 SRGGKSETSTVAEGLEEYEKEELLMIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEF 167

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             +    L+              + GD N     +    +     + N+           
Sbjct: 168 KHRFYGVLERRWECLLRQGRRVFVVGDLNIAPFAMD-RCEAGPDFEKNEKDAF------- 219

Query: 244 RCNANKN----LRNKIPIDYFVMDQN-------------AYKFLIQESF--SEILYNEDD 284
            C ++ +          ID+ ++  +                 + +         +  ++
Sbjct: 220 TCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKECDILTEYKRFKNEN 279

Query: 285 IKSRG-------KRLSDHCPISIDYD 303
           + +R         + SDH P+ I +D
Sbjct: 280 MPTRWKGGLVTKFKGSDHVPVFISFD 305


>gi|222085749|ref|YP_002544279.1| hypothetical protein Arad_2072 [Agrobacterium radiobacter K84]
 gi|221723197|gb|ACM26353.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 277

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 79/306 (25%), Gaps = 67/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77
           +R+VS N+      E                  L +Y  ++DAD++ LQE+         
Sbjct: 11  LRIVSLNVWGGRLHEP-----------------LMRYLVDIDADVLCLQEVVRTPDAEAD 53

Query: 78  ------------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                               +    P +           +    R   ++   A  VRK 
Sbjct: 54  WLVYRDHGVELPQRANLFEEIKAALPSHDAFFCPVARGELFDGDRRLFSEFGLATFVRKS 113

Query: 120 NVRV---LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
              +   L   +    +        +R A  + +  + +  + + I           +  
Sbjct: 114 YPVIGQALGFVHGAFSSDGWGPHPRSRNAHCIRL-FDYEAGYPITIAQMHGLRDPEGKGD 172

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                     QA+ L D I Q        V+ GDFN            ++ +        
Sbjct: 173 T----PARQHQARALVDLIRQVWPGEERLVVCGDFNVLPGS-----VTFEALAALGLSDL 223

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                      +   +     DY ++               ++            +SDH 
Sbjct: 224 ITSRGHRDTRTSHYRKEPRFADYMLVTP-------------MVEVVAFDAVAEPEVSDHR 270

Query: 297 PISIDY 302
            + +D 
Sbjct: 271 ALLLDL 276


>gi|94991267|ref|YP_599367.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10270]
 gi|94544775|gb|ABF34823.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10270]
          Length = 279

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 81/307 (26%), Gaps = 65/307 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++++ N +                 T      L ++      DI+ LQE+          
Sbjct: 10  KVLTLNTH-----------SWMQANTLKKLVALAEHILAEKYDIICLQEINQLIESELAT 58

Query: 85  PKNTWCIF----------------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +                                  S     +     +A+  K   
Sbjct: 59  DLPRYQALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWASNHIGYDIYQEGVAILSKQPI 118

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L+ A    +    RR++     ++GK++ V+++HL  F               
Sbjct: 119 --HVSDILVSAMADETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKG------------ 164

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    +    +      P ++ GDFN   +  G        +D  DS         
Sbjct: 165 ----FLGEWEKLEKELLTLNCPLLLMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFG 220

Query: 243 SR---CNANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 + +    NK  +  D+    ++      + +F                +SDH  
Sbjct: 221 DHSIVADIDGWQGNKEALKVDHVFTSKDFIIRSSKITFE---------GGDAPVVSDHYG 271

Query: 298 ISIDYDF 304
           + +  D+
Sbjct: 272 LEVTLDW 278


>gi|315126622|ref|YP_004068625.1| hypothetical protein PSM_A1544 [Pseudoalteromonas sp. SM9913]
 gi|315015136|gb|ADT68474.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 389

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/380 (10%), Positives = 96/380 (25%), Gaps = 80/380 (21%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWK-------NSVKRTTSDYTL 56
           K +   +  LV  +   A+ +R+ ++N++  +        K       N+++        
Sbjct: 8   KIIGGFLLSLVSASYVHAESLRVATFNVSMDATNYTAKNEKVKSDALVNALRSDHQQIKN 67

Query: 57  LRQYAKNLDADIVFLQEMG----------------SYNAVAKVFPKNTWCIFY------- 93
           + +  + +  D+V L E                  +     +      +           
Sbjct: 68  IAEIIQRVRPDVVLLNEFDYVPKSQGIEYFKTHYLNVGQNDQAAIDYPYVYIAPVNTGLA 127

Query: 94  ---------STERLINHSKRDSNNDIHTAIAVRKKNVR----------VLQQSYP----- 129
                        ++  ++     + H A+    +                +  P     
Sbjct: 128 TEFDLDNDGKKNGVMGDAQGFGFFEGHYAMVFLSRYPIDFDNIRTLQTFKHKDLPNVKMP 187

Query: 130 -LLGAKDSFSRAGNRRAVE--------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  ++       A+         + V++N K + +L  H     F    +     +
Sbjct: 188 VDPKTNTNWYNEEEWNALRLSSKSFWDIPVKVNDKVVHMLASHPTPPVFDGDEDRNGIRN 247

Query: 181 CSLLSQQAQWLKDWITQKKESLV--------PFVIAGDFNRKINYLGNNDDFWKTIDPND 232
              +   A ++ +      ++           FVI GD N          +    +  + 
Sbjct: 248 HDEIRLIADYVNNESYLYDDNGKKGGLAAKSRFVILGDLNAAPEGDKKRTNTTDQLLKSP 307

Query: 233 SLIRFPKEKDSRCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
            +                     N     +  +DY +             F     +E  
Sbjct: 308 MINAGFIPTSEGAKEQYPQAYAKNYTANWQARVDYVLPSNYGLTIKDGGVFWPKKQSELY 367

Query: 285 IKSRGKRL-SDHCPISIDYD 303
              + +   SDH  + +D  
Sbjct: 368 RLIKDRNASSDHRLVWLDLT 387


>gi|308801717|ref|XP_003078172.1| ARP protein (ISS) [Ostreococcus tauri]
          Length = 460

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 79/324 (24%), Gaps = 68/324 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----MGSY 77
           +  + +SWN+  L                      LR   +    D++ LQE    M   
Sbjct: 158 ETFKAISWNVAGLRSF------------VEKSGAKLRALVEEERPDVIILQEHKLQMSHI 205

Query: 78  NA----VAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +A    + ++ P      F  +     +S     S           +  +    +     
Sbjct: 206 DAFGSKLKELCPGYDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPAVSD 265

Query: 132 GAKDSFSRAGNRRAVE-----LLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLS 185
           G K      G +           + I  +K +V+  ++ +       L+         + 
Sbjct: 266 GFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMK 325

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKT 227
              + L        ++  P +  GD N                             F   
Sbjct: 326 AHLKAL--------DAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVM 377

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEI 278
           ++ N     F                +           +DY V  +  +           
Sbjct: 378 LEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVD 437

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +  D +       SDH P+ I  
Sbjct: 438 AFILDQV-----TGSDHAPVGITL 456


>gi|165874703|gb|ABY68234.1| DNA lyase [Beauveria bassiana]
          Length = 576

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 70/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKN-------VRVLQQSYPLLGAKDSFSRAGN----RRAVELLVEINGKKIWVLDIHL 164
           +R +               Y  L               R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGILGILCPPKSNTPYRDLPGDKQIGGYPTLNQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    ++AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQAILAGDLNIIRSEMDSSNIG 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +     +                      +     
Sbjct: 184 ESLRKEGISMDEWQSMPTRRILNQLLFEGTVVGDRDDDRGRAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|121592667|ref|YP_984563.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42]
 gi|120604747|gb|ABM40487.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42]
          Length = 267

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/277 (9%), Positives = 72/277 (25%), Gaps = 62/277 (22%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +  +      D + +QE+ + +A             +     +      +    ++ + +
Sbjct: 20  VEAWIAQSRPDCICVQEIKAQSA--------DMQGRFEELAGLKGYFHFAVKKGYSGVGI 71

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             ++              D+  R      VEL  +   +++ ++  +  S    +  +  
Sbjct: 72  YARHEPSDVVIGYGSSEFDTEGRY-----VELRFDTPARRLSIISAYFPSGSSGEERQLA 126

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                         L        ++   F++ GD N                        
Sbjct: 127 KFRFLEEFHPHLMRL--------KAEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPEE 178

Query: 221 NDDFWKTID----PNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNA 266
                K +         +  + + +    +A      N+           +DY +     
Sbjct: 179 RAWMTKLLHISDPAGGLVDVYRQLQPETTDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 E              + ++ SDH PI++ Y+
Sbjct: 239 AALARTEEI-----------YKAQKFSDHAPITVGYE 264


>gi|116056623|emb|CAL52912.1| ARP protein (ISS) [Ostreococcus tauri]
          Length = 466

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 79/324 (24%), Gaps = 68/324 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----MGSY 77
           +  + +SWN+  L                      LR   +    D++ LQE    M   
Sbjct: 164 ETFKAISWNVAGLRSF------------VEKSGAKLRALVEEERPDVIILQEHKLQMSHI 211

Query: 78  NA----VAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +A    + ++ P      F  +     +S     S           +  +    +     
Sbjct: 212 DAFGSKLKELCPGYDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPAVSD 271

Query: 132 GAKDSFSRAGNRRAVE-----LLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLS 185
           G K      G +           + I  +K +V+  ++ +       L+         + 
Sbjct: 272 GFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMK 331

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI------------------NYLGNNDDFWKT 227
              + L        ++  P +  GD N                             F   
Sbjct: 332 AHLKAL--------DAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVM 383

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEI 278
           ++ N     F                +           +DY V  +  +           
Sbjct: 384 LEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVD 443

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
            +  D +       SDH P+ I  
Sbjct: 444 AFILDQV-----TGSDHAPVGITL 462


>gi|9885286|gb|AAG01388.1|AF199493_1 nocturnin [Homo sapiens]
          Length = 221

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 70/199 (35%), Gaps = 17/199 (8%)

Query: 23  KVRLVSWNI--NTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78
            +R++ WNI    L E ++          +      L+ +       DI+ LQE+  Y +
Sbjct: 34  PIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLILEEILAYQPDILCLQEVDHYFD 93

Query: 79  AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               +  +  +   +  +          +N     A+   +   +++  +   L A    
Sbjct: 94  TFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLK 153

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196
           +      A  L  + +G++  +   HLK+           +      S Q    L++   
Sbjct: 154 TN-QVXIAQTLECKESGRQFCIAVTHLKA----------RTGWERFRSAQGCDLLQNLQN 202

Query: 197 QKKESLVPFVIAGDFNRKI 215
             + + +P ++ GDFN + 
Sbjct: 203 ITQGAKIPLIVCGDFNAEP 221


>gi|324993637|gb|EGC25556.1| RgfB protein [Streptococcus sanguinis SK405]
          Length = 271

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 67/277 (24%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLVERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIAIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +  +    R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREV--LVSEANDPTDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E++G+ + +   HL  +      E                      +  +   P V+ 
Sbjct: 136 ETEVDGQLLTIASCHLSWWDKGFQGEWAKLE----------------EELLKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|312381587|gb|EFR27301.1| hypothetical protein AND_06082 [Anopheles darlingi]
          Length = 517

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/288 (10%), Positives = 69/288 (23%), Gaps = 68/288 (23%)

Query: 13  LVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
            +  T      +   ++ SWN+  L    G                    + ++   DI+
Sbjct: 10  ALSFTPERPDVLWNYKISSWNVAGLRSWVGKGG---------------LDFIEHEQPDIL 54

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE                    +      H         +  +A+  + + +      
Sbjct: 55  CLQETKCTED---------QLPDEARHIKGYHPYWLCKPGGYAGVAIYSRKMPIHVSYGL 105

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
               +D   R          +    +K +++ +++ +                   Q  +
Sbjct: 106 GDEEQDQDGRL---------LTAEYEKFYLVCVYVPNAGNKLVTLPKRMRWDEKFHQYLR 156

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSL 234
            L        +S  P ++ GD N     +                   D    +     +
Sbjct: 157 EL--------DSKKPVILCGDMNVAHEEIDLANPKTNKKNAGFTQEERDGLSKLLSFGFV 208

Query: 235 IRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQE 273
             F +    R  A                  +DYF++ Q     +   
Sbjct: 209 DTFRQLYPDRKAAYSFWTYMGGARAKNVGWRLDYFIVSQRFTDKVTDN 256


>gi|169599781|ref|XP_001793313.1| hypothetical protein SNOG_02716 [Phaeosphaeria nodorum SN15]
 gi|160705322|gb|EAT89447.2| hypothetical protein SNOG_02716 [Phaeosphaeria nodorum SN15]
          Length = 283

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 73/280 (26%), Gaps = 10/280 (3%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M+    + L        +  A  +RL++ NI   +  +     K    R        +  
Sbjct: 1   MLVSTPILLALSTFIMHSHAALPIRLLTHNIRY-ATTDPFDGEKPWTDRKPLIINEFKYN 59

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                   + LQE+ +      +      W                S      A+   + 
Sbjct: 60  TLYNAESFICLQEVLNNQITDIMNGLGPDWSYIGVGRDDGKTKGEYSPLIFRKAVWEVES 119

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
              V          K  +     R       +    K  VL +      F +S   +   
Sbjct: 120 WKTVWLNE-DGSVGKKGWDAGSVRIVTVGHFKHIASKKKVLGLCTH---FDNSGAVSRRE 175

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           S  +     + L    + +  + VP+ + GD N + +               D+      
Sbjct: 176 SAKI----VETLIKTESTRDGTAVPYFLGGDLNSETSDDAYQILNASNSTVRDAKELAAW 231

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
               +         K+ ID+  +   +      + +S + 
Sbjct: 232 NYGDKYTFTGFDDEKVVIDFVFLGPRSRGDWEVKGYSVLP 271


>gi|261854669|ref|YP_003261952.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2]
 gi|261835138|gb|ACX94905.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2]
          Length = 256

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 80/305 (26%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R++S+N N +        +                +    +AD V +QE    +     
Sbjct: 1   MRVISFNANGIRSAARKGFF---------------DWLSEQNADFVCIQETKAQADQLTD 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    +   Y +     +S            A R  +  + Q   P   A+  +    
Sbjct: 46  PEFCPAGYTCQYVSAEKKGYSGVAIY-------ARRSPDAIITQLGLPEFDAEGRYCAFE 98

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                          + V  ++L S    D  + +     +      +          + 
Sbjct: 99  YP------------DLMVASLYLPSGSAGDHRQESKDRFLAAYLPILESYLQ------KQ 140

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
             P ++ GD+N     +   +                +   +      +   +       
Sbjct: 141 HKPLILCGDWNIAHKEIDLKNWKSNQKNSGFLPHERAWLDELFDRLGFVDAHRLVAPGEA 200

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY ++  +    + + +             R  + SDH P
Sbjct: 201 VYTWWSNRANAWENNVGWRIDYQIITPDLADRVERATV-----------YRDMKFSDHAP 249

Query: 298 ISIDY 302
           + IDY
Sbjct: 250 LIIDY 254


>gi|224069930|ref|XP_002193896.1| PREDICTED: deoxyribonuclease I-like 2 [Taeniopygia guttata]
          Length = 330

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 79/299 (26%), Gaps = 40/299 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVA 81
           +R+ ++NI             ++         ++    +    D+V +QE+   N  AV 
Sbjct: 50  LRIGAFNIQAFG---------DTKMSNKEVADIIINVLRRY--DVVLVQEVRDSNLSAVT 98

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++  +         +  I+      N         R   V V+          +      
Sbjct: 99  ELMEQLNSASTSPYDYEISGPLGRENYKEMYLFIYRTDVVSVV-----DTYQYEDPQDIF 153

Query: 142 NRRAVELLVEINGKKIWV--LDIHLKSFCFLDSLENTYSP-----------SCSLLSQQA 188
           +R    L V       W       +        +    +            +      + 
Sbjct: 154 SREPFILRVSAPSTSKWRNKWPWVVAWGGCGADIPLPLAEVKEFVLVPLHSAPHDAVAEI 213

Query: 189 QWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             L D              +  GDFN   +Y+  +D     +  ND       +      
Sbjct: 214 DALYDVYLAIINKWGTDNLMFLGDFNADCSYVQPSDWSSIRLRTNDIFKWLIPDSADTTV 273

Query: 247 ANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
              +       D  V+  N   + ++  S     +       + + L  SDH P+ +  
Sbjct: 274 GKSDCAY----DRIVVCGNKLKRSILSNSAGIYNFQRALQLDQEEALAVSDHYPVEVKL 328


>gi|315027007|gb|EFT38939.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2137]
          Length = 351

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 88/318 (27%), Gaps = 62/318 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP 179
             +   L           N  R  +E    I G  K++ V ++HL+++   D        
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFSIKGTDKELVVFNLHLEAYDNGDGKIA---- 228

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDD 223
                  Q++ L D ++Q+       +  GDFN+                    +   D 
Sbjct: 229 -------QSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPNLGEAGWAPGEIDPADL 281

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   D      +  +     +        ID F++  N     ++    +  Y   
Sbjct: 282 PKHFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT-- 339

Query: 284 DIKSRGKRLSDHCPISID 301
                     DH P+ ++
Sbjct: 340 ----------DHQPVKME 347


>gi|291241803|ref|XP_002740799.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus
           kowalevskii]
          Length = 1257

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 75/258 (29%), Gaps = 30/258 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYN- 78
            +  ++S+N+           +             +           D++  QE+     
Sbjct: 196 NEFTVISYNV-------YEIPYPVGQFGQRERLCRIPNRLLEEHPGVDVIIFQEVFKGGC 248

Query: 79  ------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                 ++  +   N + I+ +T             +    IA R   +     ++  + 
Sbjct: 249 GYEFGVSLKDLLAANGF-IYSTTTVGDPPEMYFRPYNGGVFIASRWPILEESSTTFDPVP 307

Query: 133 AKDSFSRAGNRRA-VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +D +   G   A +E       K   +   H +           ++   ++   Q+Q +
Sbjct: 308 TEDIYLTKGVAYAKIEKSTNAGSKVYHIFGTHFQFTPSGT----DHADYDTIRVLQSQQM 363

Query: 192 KDWI-TQKKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             ++  Q      P ++ GD N   I Y  + D+ +  I      I    +       N+
Sbjct: 364 AQFMTAQNIPQDEPVILGGDLNVDSIKYSDHRDELFDIIGATVPPIIGDLDTTFDPVINQ 423

Query: 250 NLRN------KIPIDYFV 261
                        +DY +
Sbjct: 424 LPGEGFIGAIPEWLDYVL 441


>gi|257421278|ref|ZP_05598268.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis X98]
 gi|257163102|gb|EEU93062.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis X98]
          Length = 358

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 88/318 (27%), Gaps = 62/318 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP 179
             +   L           N  R  +E    I G  K++ V ++HL+++   D        
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFSIKGTDKELVVFNLHLEAYDNGDGKIA---- 235

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDD 223
                  Q++ L D ++Q+       +  GDFN+                    +   D 
Sbjct: 236 -------QSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPNLGEAGWAPGEIDPADL 288

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   D      +  +     +        ID F++  N     ++    +  Y   
Sbjct: 289 PKHFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT-- 346

Query: 284 DIKSRGKRLSDHCPISID 301
                     DH P+ ++
Sbjct: 347 ----------DHQPVKME 354


>gi|257086387|ref|ZP_05580748.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis D6]
 gi|256994417|gb|EEU81719.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis D6]
          Length = 358

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 88/318 (27%), Gaps = 62/318 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP 179
             +   L           N  R  +E    I G  K++ V ++HL+++   D        
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFSIKGTDKELVVFNLHLEAYDNGDGKIA---- 235

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDD 223
                  Q++ L D ++Q+       +  GDFN+                    +   D 
Sbjct: 236 -------QSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPNLGEAGWAPGEIDPADL 288

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   D      +  +     +        ID F++  N     ++    +  Y   
Sbjct: 289 PKHFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT-- 346

Query: 284 DIKSRGKRLSDHCPISID 301
                     DH P+ ++
Sbjct: 347 ----------DHQPVKME 354


>gi|229548971|ref|ZP_04437696.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis ATCC 29200]
 gi|307275513|ref|ZP_07556655.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2134]
 gi|312952698|ref|ZP_07771560.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0102]
 gi|229305992|gb|EEN71988.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis ATCC 29200]
 gi|306507901|gb|EFM77029.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2134]
 gi|310629214|gb|EFQ12497.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0102]
 gi|315153106|gb|EFT97122.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0031]
 gi|315156879|gb|EFU00896.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0043]
 gi|315157666|gb|EFU01683.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0312]
          Length = 351

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 88/318 (27%), Gaps = 62/318 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP 179
             +   L           N  R  +E    I G  K++ V ++HL+++   D        
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFSIKGTDKELVVFNLHLEAYDNGDGKIA---- 228

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDD 223
                  Q++ L D ++Q+       +  GDFN+                    +   D 
Sbjct: 229 -------QSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPNLGEAGWAPGEIDPADL 281

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   D      +  +     +        ID F++  N     ++    +  Y   
Sbjct: 282 PKHFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT-- 339

Query: 284 DIKSRGKRLSDHCPISID 301
                     DH P+ ++
Sbjct: 340 ----------DHQPVKME 347


>gi|188578884|ref|YP_001915813.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523336|gb|ACD61281.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 266

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 84/313 (26%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +                +    DAD++ +QE  +     ++
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQETKAQE--HQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +         +  S    ++ +A+  ++     ++       D   R    
Sbjct: 44  AGPD-----FLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E       V+  ++ S    +  +           Q  QWL+  + +   S  
Sbjct: 96  ------IEARFGNRSVVSFYIPSGSSGELRQGYK-------FQVMQWLRPILDEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN-----------------DSLIRFPKEKDSRCN 246
            +V+ GD+N     L   +      +                   D              
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADVPDDANAAEGRGWVDSY 202

Query: 247 A--------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       L   S             R 
Sbjct: 203 RVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPGLRDTLRACSI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 ERFSDHAPYIVDY 264


>gi|62085790|gb|AAX63286.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 71/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGVLGVLCPPKSNMPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +     +                      +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEGTVIGDRDDDRECAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K           IDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|260774417|ref|ZP_05883331.1| extracellular nuclease-related protein [Vibrio metschnikovii CIP
           69.14]
 gi|260610544|gb|EEX35749.1| extracellular nuclease-related protein [Vibrio metschnikovii CIP
           69.14]
          Length = 837

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 95/324 (29%), Gaps = 46/324 (14%)

Query: 22  QKVRLVSWNINTLS------------EQEGVSLWKNSVKRTTSDYT----LLRQYAKNLD 65
             +++V++N   L             +    + +     +  +D       L      ++
Sbjct: 467 GNIKIVTFNTEGLFISHLHGNNNPAVDNHSQTGFVTGGAKDQADLDLQIKKLTAAIHTMN 526

Query: 66  ADIVFLQEMGSY-----NAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           +D++ L ++ +      +A+  +        +N      +     N      NN   + I
Sbjct: 527 SDLIALLQVENNGFEQGSAIDYLLTKINKGQENKQHYQVAKWNASNQDHYVGNNPTASYI 586

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSL 173
             R    ++       + + D  S + N   +  L +      I ++   +       + 
Sbjct: 587 LYRPSVFKLNDLELLTMPSDDKQSISMNETVIATLNIHSKENPIELVVAAVDLVNRDQNC 646

Query: 174 ENTYSPS---CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
               +     C  L QQA      I    +     +I G  +            +   + 
Sbjct: 647 HGDTTQQTTPCDQLRQQASQ--AIIEAMSKKTDHQLILGSLHAYPKEKA--ALVFSPTEL 702

Query: 231 NDSLIRFP-KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR- 288
           N  +     ++++S   + +       +DY  M  +     +  +   I   +  + +  
Sbjct: 703 NSYVDAVAIRDRNSERYSIERNAESGRVDYIFMSTSLRDKFVDSAPWSINSAQSALLNYQ 762

Query: 289 ---------GKRLSDHCPISIDYD 303
                      R S H PI +  +
Sbjct: 763 SGMTFDETNWYRSSSHDPILLTLN 786


>gi|190895489|ref|YP_001985781.1| endonuclease/exonuclease/phosphatase protein [Rhizobium etli CIAT
           652]
 gi|190699434|gb|ACE93518.1| putative endonuclease/exonuclease/phosphatase protein [Rhizobium
           etli CIAT 652]
          Length = 271

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 76/279 (27%), Gaps = 53/279 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + S+N++     +              D     +    + AD++ LQE  +         
Sbjct: 39  IASYNVHKCVGTDRRF-----------DPERTSRVIHEIGADVIALQEADTRFGERTGIL 87

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   +    +  +     +  H  + + KK +        L G          R A
Sbjct: 88  DLGRLERETGLIPVPVAGMAKAHGWHGNVVLFKKGLVHDVHQIRLPGL-------EPRGA 140

Query: 146 VELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           +   +E+  G  + ++  H                     +QQA+ L + I       +P
Sbjct: 141 LVAEIELEEGGVLRIIAAHFGLLRHN-------------RAQQARTLVELIKD--RHEMP 185

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GD N         +         ++      E      +       + +D  + ++
Sbjct: 186 TILLGDLN---------EWRLGDRSSLNTFQSAFGELPPAVPSFPAGLPLLALDRIIANR 236

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        I   E       +  SDH PI    D
Sbjct: 237 KG----------IITEVEAHDTPLARIASDHLPIKALID 265


>gi|324991280|gb|EGC23213.1| RgfB protein [Streptococcus sanguinis SK353]
          Length = 271

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 68/277 (24%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREV--LVSEVNDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E     +                +  ++  P V+ 
Sbjct: 136 ETEVEGQLLTIASCHLSWWDKGFQGEWAKLEA----------------ELLKAESPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS I   +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHIAAKEIVGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMNIERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|308477169|ref|XP_003100799.1| CRE-CCR-4 protein [Caenorhabditis remanei]
 gi|308264611|gb|EFP08564.1| CRE-CCR-4 protein [Caenorhabditis remanei]
          Length = 672

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/352 (13%), Positives = 94/352 (26%), Gaps = 75/352 (21%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  +     S   +         TL+ +  +  +AD++ LQE+ +    
Sbjct: 284 TFTVLCYNVLCDKYATVNQYSYCPSWALNWEYRKTLIIKEIRTYEADVITLQEVETEQFR 343

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKK-----------NVRVLQQS 127
               P+     +         +K  S  +       A+  K                   
Sbjct: 344 TLFLPELKALGYTGIFAAKTRAKTMSEEEKKYVDGCAIFWKVDKFDMDKQQVFEFSAVAM 403

Query: 128 YPLLGAKDSFSRAGNR--RAVELLVEIN----------------------GKKIWVLDIH 163
                + +  +R   R   A+  +++I                       G  + V   H
Sbjct: 404 KKASSSGNILNRVMPRDNIALCAVLKIKDAVYANHPFIGRMTIPANDNVVGNPLVVCTAH 463

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE---SLVPFVIAGDFNRKINYL-- 218
           +          +       LL+ +   L D +++  +     VP +I GD N        
Sbjct: 464 VHW---DPEFCDVKLVQTMLLANEVSRLLDEVSKSYKITQQQVPVLICGDLNSLPESGVF 520

Query: 219 --------GNNDDFWKTIDPNDSLIRFPKEKDSRC-----------------NANKNLRN 253
                     +   +K+   +  L  F    D                      N  L  
Sbjct: 521 EYLSKGQISRSHADFKSFRDDTCLEMFSNSTDKNVISHPLRLDSACDITSIPFTNYTLDF 580

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDD---IKSRGKRLSDHCPISIDY 302
           K  IDY      +   L      +  + + +           SDH PI   Y
Sbjct: 581 KGMIDYIFATPQSLARLGILGPFDPQWVQSNKILGFPHPHVASDHIPIMAQY 632


>gi|258507959|ref|YP_003170710.1| exodeoxyribonuclease III [Lactobacillus rhamnosus GG]
 gi|257147886|emb|CAR86859.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus GG]
          Length = 252

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 72/302 (23%), Gaps = 81/302 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N L                             LDAD   LQE        ++
Sbjct: 1   MKMISWNVNGLRAVLKKDFMT---------------IFNELDADWFCLQETKMQAGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  F             +    ++  A+  K+  +       +   D+  R    
Sbjct: 46  DLPGYYQYF-----------NYAERKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRI--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +++ ++  +        +               L            
Sbjct: 92  ------ITLEYTKFYLMTVYTPNSGGELKRLDYRQQWDRDFLAYTNELAA--------KK 137

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V  GD N                          DF K ++     I   +        
Sbjct: 138 PLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQLNSG--FIDTFRHFYPDTVT 195

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYFV                  Y +D         SDHCP+
Sbjct: 196 YSWWSYRFHARANNAGWRIDYFVASSAFQ-----------PYIQDAKILTQIMGSDHCPV 244

Query: 299 SI 300
            +
Sbjct: 245 EL 246


>gi|221069494|ref|ZP_03545599.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1]
 gi|220714517|gb|EED69885.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1]
          Length = 271

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 74/275 (26%), Gaps = 62/275 (22%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            + +    D + +QE+ +  +             +     +      +    ++ + V  
Sbjct: 26  AWIEATAPDCICVQEIKAQAS--------DMAGRFEVLAGMKGYFHFAEKKGYSGVGVYT 77

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           ++          +   D+  R      VE   +   +K+ V+  +  S    +  +    
Sbjct: 78  RHEPSDVVVGFDIDEFDAEGRY-----VETRFDTPTRKLSVISAYFPSGSSGELRQEAKF 132

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNND 222
              + +               ++   FV+ GD N                         D
Sbjct: 133 RFLAKMHSHL--------MHLKAERDFVLCGDINIAHQQADLKNWRGNQKNSGFLPEERD 184

Query: 223 DFWKTID----PNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNAYK 268
              K +         +  +   +    +A      N+           +DY +       
Sbjct: 185 WMTKLLHKTEISGGLVDVYRLLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAVAA 244

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ES             +G++ SDH PI+I YD
Sbjct: 245 LARTESI-----------YKGEKFSDHAPITIGYD 268


>gi|257457966|ref|ZP_05623125.1| exodeoxyribonuclease III [Treponema vincentii ATCC 35580]
 gi|257444679|gb|EEV19763.1| exodeoxyribonuclease III [Treponema vincentii ATCC 35580]
          Length = 258

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 79/298 (26%), Gaps = 72/298 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
            ++SWN+N +                 +      ++      D++ LQE     A  +  
Sbjct: 3   SVISWNVNGIRA---------------AQKKGFLEWLYTESPDVLCLQE---TKARKEQL 44

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P       +       +  + +    ++  AV  K   +  ++  L    D         
Sbjct: 45  PSELITPAWKEGTYKTYW-QAAKKPGYSGTAVFCKKEPLNIRTMNLPAFDDEGR------ 97

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++  +   + V+  +  +     +        C         + ++    ++    
Sbjct: 98  ----VLVADFDTVSVISAYFPNSQEGGARLGYKLDFC-------AAMLEFCNALQKDGRH 146

Query: 205 FVIAGDFNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            V+ GD+N                   YL     +  T      +  F     +  +   
Sbjct: 147 IVLCGDYNIAHKPIDLANPKSNEQNPGYLPEERAWMDTFTQAGYIDTFRHF-CAEPHRYT 205

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               +           IDY  +D      + + S    +             SDHCPI
Sbjct: 206 WWSYRFHAREKNIGWRIDYHCVDNAFLPNIRESSIMADVL-----------GSDHCPI 252


>gi|242007919|ref|XP_002424763.1| TRAF and TNF receptor-associated protein, putative [Pediculus
           humanus corporis]
 gi|212508277|gb|EEB12025.1| TRAF and TNF receptor-associated protein, putative [Pediculus
           humanus corporis]
          Length = 360

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 76/294 (25%), Gaps = 45/294 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             T     +++ +SWN++ L                      + +  +  + DIVF QE+
Sbjct: 102 TVTTEPPPRMKFLSWNLDGLDVHN-----------LKRRTRAVIKLIQKHEPDIVFFQEV 150

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +A   +     +      E             I                        
Sbjct: 151 IPESAEYFITKLPEYKCLKGGEDNYFTMTLLRIFTIFYDNHYIVDYP------------- 197

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              +   +R  +     +   K+ +L+ HL+S                   QQ   +   
Sbjct: 198 ---NTKMDRNLLVTEAHMGKLKLKLLNTHLEST----------KEHSEERQQQLS-IAFS 243

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID-----PNDSLIRFPKEKDSRCNANK 249
                E     +  GD N +   +    +F+   +               +  +  +   
Sbjct: 244 KCLSFEENSTIIFGGDLNLREKEVKTPKNFFDLWEFCGSPQQFKYTWDMTKNSNNSSNFG 303

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + K   D      +  K    + F  I    + +       SDH  I + +D
Sbjct: 304 KFKPKCRFDRIYYRFSNPKRAFPKHFVLIG--SERVPQTQSFPSDHWGIIVLFD 355


>gi|94989322|ref|YP_597423.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS9429]
 gi|94993210|ref|YP_601309.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS2096]
 gi|94542830|gb|ABF32879.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS9429]
 gi|94546718|gb|ABF36765.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS2096]
          Length = 279

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 80/307 (26%), Gaps = 65/307 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++++ N +                 T      L ++      DI+ LQE+          
Sbjct: 10  KVLTLNTH-----------SWMQANTLKKLVALAEHILAEKYDIICLQEINQLIESELAT 58

Query: 85  PKNTWCIF----------------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +                                        +     +A+  K   
Sbjct: 59  DLPRYQALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPI 118

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L+ A    +    RR++     ++GK++ V+++HL  F               
Sbjct: 119 --HVSDILVSAMADETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKG------------ 164

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    +    +      P ++ GDFN   +  G        ++  DS         
Sbjct: 165 ----FLGEWEKLEKELLTLNCPLLLMGDFNNPTDQDGYQVMMGSPLNLQDSHKVADHVFG 220

Query: 243 SR---CNANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 + +    NK  +  D+    ++      + +F                +SDH  
Sbjct: 221 DHSIVADIDGWQGNKEALKVDHVFTSKDFIIRSSKITFE---------GGDAPVVSDHYG 271

Query: 298 ISIDYDF 304
           + +  D+
Sbjct: 272 LEVTLDW 278


>gi|320592034|gb|EFX04473.1| endonuclease exonuclease phosphatase family protein [Grosmannia
           clavigera kw1407]
          Length = 442

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/288 (10%), Positives = 76/288 (26%), Gaps = 26/288 (9%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              ++S N+  L      +          ++   +         +++ +QE  +Y+A   
Sbjct: 23  SFNVLSMNVAGLPAILQNNDETGDK---KTNAGTIGTDFAKYGYNVIHVQEDFNYHAYIY 79

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               + +    S    I        +          +              +        
Sbjct: 80  AADNHKYRTATSGGAAIGSGLNTLASFDWVDF---TRVKWNTCSDASSNDCETPKGFTFM 136

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  ++     +G      ++H  +           +          + +  +I       
Sbjct: 137 RVIIDAD---SGVFADFYNLHADAGTETGDETARTAN--------LEQVAAYIDTW-SVG 184

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR------CNANKNLRNKIP 256
              ++ GD N +     +N   +   +         +           C+          
Sbjct: 185 NAVLVFGDTNSRYTRAADNITVFARQNGLTDAWVQLERAGVNPTVETLCDNPTTSNTCET 244

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +D      NA   L    F+        +++ G  L+DH PI++ +D+
Sbjct: 245 VDKVFYRGNAVVDLKATYFNYESKK--FLQANGSVLTDHNPITVSFDW 290


>gi|238854034|ref|ZP_04644388.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4]
 gi|238833354|gb|EEQ25637.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4]
          Length = 254

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 68/303 (22%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                            +LDADI  +Q+     A    
Sbjct: 1   MKFMSWNVNGLRAALRHGF---------------VNTFTDLDADIFAIQDTR-VEANEVQ 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++  +   ++                     +   + +             
Sbjct: 45  IDLPGYYQYWNYAKRKGYAGTAVFTKEK---------PITVANGFGVPEVDGEGR----- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     + +D+ +          +               L  +         
Sbjct: 91  -----SITLEFPNFYFIDVQVPFSGEKLQRLDFRELWAQTFRNYVTKLMQY--------K 137

Query: 204 PFVIAGDFNRKIN-------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NK 249
           P +I GD +              +    +  I+  +                        
Sbjct: 138 PVIIGGDMSVAHEKIDLAEPDDNHRHAGFTGIERKEFSELLNAGFIDTFRYFHPDEAKYT 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DYF+   N    +I                     SDHCPI +
Sbjct: 198 YWSYREDARAKNIGWRLDYFLASHNLEDKMINTKIL-----------NNIMGSDHCPIEL 246

Query: 301 DYD 303
           D D
Sbjct: 247 DLD 249


>gi|309812653|ref|ZP_07706397.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus
           sp. Ellin185]
 gi|308433348|gb|EFP57236.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus
           sp. Ellin185]
          Length = 226

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 75/279 (26%), Gaps = 60/279 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           RL+S+N+  L                  D   L +  ++   D++ LQEM  +       
Sbjct: 4   RLMSYNVRGL----------------KDDRAALLRVIRHAAPDVLCLQEMPRH------- 40

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P +   I    E +       + + + TAI    +              +        R 
Sbjct: 41  PFSDHRIAEFAESVGLVWGGGNRHRMSTAIVTAPRLDVAASGHGLYTVPR----PQEPRG 96

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V + G+  W+      S               S+ +  A+ L           VP
Sbjct: 97  YAWAEVCLPGEAKWLAISTHLSLYS------------SMRAGHARELIA--DPNLPGDVP 142

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           + IAGDFN   N     +     +      I      +              ID+     
Sbjct: 143 WAIAGDFNELENGPAGREFKAHGLVDAGPRINTFNAAEPH----------KRIDFVYASP 192

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +     +  S  E                DH P+ +D  
Sbjct: 193 SLTLETVDMSAVEHDMTVAT---------DHRPLVVDVT 222


>gi|300705466|ref|YP_003747069.1| exodeoxyribonuclease III/endonuclease/phosphatase [Ralstonia
           solanacearum CFBP2957]
 gi|299073130|emb|CBJ44488.1| putative exodeoxyribonuclease III/endonuclease/phosphatase
           [Ralstonia solanacearum CFBP2957]
          Length = 261

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 83/306 (27%), Gaps = 77/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +R++S N+N +        +                +    DAD V +QE+     +   
Sbjct: 2   LRIISANLNGVRSAASKGFF---------------DWMGKQDADFVCVQELKCAQDDMTP 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++   + +   +       +S             +              +G       A 
Sbjct: 47  ELLAPHGYHGVFQHAVKKGYSGAGLYTRHQPDDVI--------------VGFDGGEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE    K+ V+ +++ S    +  +        L  Q    L+       E 
Sbjct: 93  GRY-----VEARYGKLSVISVYVPSGSSGEERQQAKYRFMDLFMQHLVDLRH------EK 141

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCN 246
               V+ GD N     +   +                +   +      +   +  D+R  
Sbjct: 142 GREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWLTRLFDEVGYVDVFRTLDTRPE 201

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +          + S             R  + SDH P
Sbjct: 202 QYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARRTSI-----------FRDIKFSDHAP 250

Query: 298 ISIDYD 303
           +++DYD
Sbjct: 251 LTVDYD 256


>gi|330982162|gb|EGH80265.1| exonuclease III [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 155

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 56/191 (29%), Gaps = 39/191 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++VS+NIN L                 +    L         D++ LQE  +       
Sbjct: 1   MKIVSFNINGL----------------RARPHQLAALIDKHQPDVIGLQETKVSDEQFPQ 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  + + +                 H  +A+  +N  +        G +     + 
Sbjct: 45  AEVEALGYHVHFH------------GQKGHYGVALLSRNAPLALHK----GFEGDDEESQ 88

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R       + NG+ + +++       F       +        +  + L+  +  +  +
Sbjct: 89  KRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGQFRN 143

Query: 202 LVPFVIAGDFN 212
             P ++ GD N
Sbjct: 144 DQPLIVMGDVN 154


>gi|326517565|dbj|BAK03701.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 296

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 88/311 (28%), Gaps = 70/311 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +   ++++++SWN+N LS       + +               A+  + D++ LQE 
Sbjct: 31  PPLSGDTKQMKILSWNVNGLSNIVQSGGFSS-------------ALAQRENFDVLCLQET 77

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K F               N+         ++   V  +   +  Q    +   
Sbjct: 78  HLKEGDVKDFKNLI------PGYEYNYWSCSVARLDYSGTGVISRVKPISVQYGIGIAEH 131

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
           D   R         ++ +  +  ++++ ++ +    L  L           S   + L+ 
Sbjct: 132 DQEGR---------VITLEFENFYLVNAYVPNSGRGLRRLVYRVDNWDPSFSDFVEKLES 182

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFP 238
           +         P ++AGD N     +  ++                 ++        +   
Sbjct: 183 F--------KPVIVAGDLNCARQSIDIHNPAAKTEDAGFTEEERESFQINFDMRGFVDTF 234

Query: 239 KEKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +++  +                   +DYF+   +    +            D        
Sbjct: 235 RKQHPKAVGYTFWGENQRCNNKGWRLDYFLASGSIIDRVH-----------DSYILPDVT 283

Query: 292 LSDHCPISIDY 302
            SDH PI +  
Sbjct: 284 SSDHSPIGLVL 294


>gi|163788854|ref|ZP_02183299.1| hypothetical protein FBALC1_11472 [Flavobacteriales bacterium
           ALC-1]
 gi|159876091|gb|EDP70150.1| hypothetical protein FBALC1_11472 [Flavobacteriales bacterium
           ALC-1]
          Length = 283

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 72/285 (25%), Gaps = 34/285 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------GS 76
           + + SWNI      +  +  +            + Q+ +    DI+  QEM        +
Sbjct: 6   LNVGSWNIEKFGLVDDNTENEY----------AIAQHIELSGVDILAFQEMYITNKSRFT 55

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL----- 131
              +             + +  I  ++  S+      +      V     +  +      
Sbjct: 56  NKHLDAALDLVKEHTGNTWKYEIFPNRSASDTSQLCGVTWNTNRVTKKLDTLKIPVKTKV 115

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +       +R    +  E    K  ++ I +     +                  + +
Sbjct: 116 EFEGKTLWLWDRIPHAVKFETEQGKTDLIIISIHMKSNVGKRYIVERKRYEEAKTLIENI 175

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              I + K+     VI GD N K       + F      + +                  
Sbjct: 176 PLVIDELKDKD--IVILGDTNCKSRREPAINAFITGGFEDLNADDI---------PTFVR 224

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             K P D   +          +   + +       +  + LSDH 
Sbjct: 225 GEKAPFDRIFV-PGDEDRKPFKYSRQYIMRSASPLAHDEYLSDHY 268


>gi|74001681|ref|XP_857276.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit
           6-like isoform 1 isoform 4 [Canis familiaris]
          Length = 556

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/346 (11%), Positives = 90/346 (26%), Gaps = 70/346 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 186 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 245

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 246 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 305

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEIN--------GKKIW-----VLDIHLKSFCFL 170
           +       ++        +   V +++E++        GK I      +L +      + 
Sbjct: 306 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTAEGKPIHAADKQLLIVANAHMHWD 365

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY------- 217
               +       +   + + + +  + +        + +P V+  D N   +        
Sbjct: 366 PEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLS 425

Query: 218 ----LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRN 253
                 N+ DF +       +      K+                         N     
Sbjct: 426 NGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDF 485

Query: 254 KIPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           K  IDY    +   N    L       ++ N           SDH 
Sbjct: 486 KGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 531


>gi|312074101|ref|XP_003139819.1| endonuclease/Exonuclease/phosphatase [Loa loa]
 gi|307765020|gb|EFO24254.1| endonuclease/Exonuclease/phosphatase [Loa loa]
          Length = 345

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 85/282 (30%), Gaps = 42/282 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++SWNI+ L E              T  +T +      + AD+VFLQEM        
Sbjct: 103 SLTVMSWNIDGLDESN-----------LTIRFTAVCYIISKISADVVFLQEMTPDLVPQI 151

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                           + +          T + ++     +  ++ P   +         
Sbjct: 152 RKNLGGEYSILVATPNLPY---------FTVVLLKPFIELISHKAIPYGCSG------MG 196

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +    +G K+ +L+ HL+S                +   Q Q   + +T+  +  
Sbjct: 197 RSMQLVETSAHGHKMMLLNTHLESM----------KEHSDVRLTQIQECFEQLTEWDDGK 246

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR--CNANKNLRNKIPIDYF 260
              V  GD N + + +G     +K            K        +     + +   D  
Sbjct: 247 TIIVFGGDLNARDSEIGELPPGFKDAWVAAGSKPKFKFTWDTLLNDNKAAGKARCRFDRI 306

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +         +       L  ++ I++     SDH  I + +
Sbjct: 307 IY----KSAGVFSGVDFSLEGQNRIRTSLCFPSDHWAILVHF 344


>gi|254468203|ref|ZP_05081609.1| exodeoxyribonuclease III [beta proteobacterium KB13]
 gi|207087013|gb|EDZ64296.1| exodeoxyribonuclease III [beta proteobacterium KB13]
          Length = 259

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/274 (11%), Positives = 73/274 (26%), Gaps = 65/274 (23%)

Query: 59  QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++ +  DAD + +QE+     +   ++   N +  ++S      +S       I      
Sbjct: 21  EWMRIQDADFICIQELKAQEKDMTEEMLNINGYAGYFSYAEKPGYSGVGIYTKIK----- 75

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                        +            R      +E+    + ++  +  S    D  +  
Sbjct: 76  ---------PKKIISKLNFDTIDDEGRY-----IELIYDDVSIISSYFPSGSSGDIRQ-- 119

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                 +     +++ + +  K +     ++ GD N                        
Sbjct: 120 -----EIKFNFLKFMTELLNLKTQKKEKIILCGDLNIAHKEIDLKNHKGNKKNSGFLPEE 174

Query: 221 NDDFWKTIDPNDSLIRFPK-EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270
                  I+       +     +    A     N+           IDY +   +    +
Sbjct: 175 RAWITNLIEEIGWKDTYRNIYPNEEELAYTWWSNRGQAWANNVGWRIDYQMTSPSLTFQI 234

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            + +R SDH P+ +DYDF
Sbjct: 235 KDAVV-----------YKEERFSDHSPLIVDYDF 257


>gi|289668451|ref|ZP_06489526.1| hypothetical protein XcampmN_08130 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 245

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 79/286 (27%), Gaps = 60/286 (20%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++ NI   S     S +               +    + +       DIV LQE    + 
Sbjct: 2   LTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGER--DIVGLQEADPGSL 59

Query: 80  VAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +    +  +    +     +H   R       +A  +  K   V  Q + L G      
Sbjct: 60  RSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHALPG------ 113

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R G R  +          + V   HL                 +    Q  ++ + ++  
Sbjct: 114 RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLAFIAELLSDH 160

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NANKNLRNKIP 256
             +    ++ GDFN   +                 L R  + +   C  +   + R    
Sbjct: 161 PNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCEVHTFPSWRPDRA 205

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID+ ++  +                 +  ++     SDH  + +D 
Sbjct: 206 IDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 237


>gi|269957925|ref|YP_003327714.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM
           15894]
 gi|269306606|gb|ACZ32156.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM
           15894]
          Length = 316

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/354 (9%), Positives = 72/354 (20%), Gaps = 113/354 (31%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+N                   +       + +  D D++ +QE    +     
Sbjct: 1   MRLATWNVN----------------SIRARVDRAVAFLERWDVDVLAIQETKCRDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN----------------------- 120
                    ++      +            +A+  +                        
Sbjct: 41  ------QFPHAAFEAAGYEVAHVGFSQWNGVAIVSRVGIDDVELAFPGQPGFSKPTPPVA 94

Query: 121 --------------VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING------------ 154
                           V      L    D  S         +  +               
Sbjct: 95  EPTPVVEPVETTPPPVVEPVETTLFDLGDVVSTGSTTGTGAVPGDAPDAVHEARALGATC 154

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFN 212
             + V  +++ +   +      Y  +        + L+         +      + GD+N
Sbjct: 155 GGVRVWSLYIPNGRAVGDPHYAYKLA------WLEALRTQAAGWLTADPAAQVALVGDWN 208

Query: 213 RKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKI--- 255
                    D                      +       +E             K    
Sbjct: 209 VIPLDTDVYDPTAFIGSTHVTPAERAAFAAFADAGYREVSREHLPAERTYTYWDYKQLAF 268

Query: 256 ------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  ID+          +   +        D  + +GK  SDH P+ +D  
Sbjct: 269 PKNNGMRIDFTWATPALADRVTAVTI-------DREERKGKGASDHVPVILDLT 315


>gi|256761787|ref|ZP_05502367.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T3]
 gi|256683038|gb|EEU22733.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T3]
          Length = 358

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFPIEGTDKELVVFNLHLEAYDNGEG------- 232

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 233 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPNLGEAGWAPGEIDPADLPK 290

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 291 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 346

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 347 --------DHQPVKME 354


>gi|110346936|ref|YP_665754.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1]
 gi|110283047|gb|ABG61107.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1]
          Length = 326

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 81/298 (27%), Gaps = 56/298 (18%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           V    F   P ++ +   + +V+ N+   +      L              +        
Sbjct: 83  VFPFFFLPQPASSQIGAPLTVVTANVYVDNPDPADFLS----------LPSIAA------ 126

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           ADI+ LQEM +      +     W    S +   N           T + +  +   +  
Sbjct: 127 ADILVLQEM-TPRWQDALAASGIWPFESSRDLHAN-----------TDMKLFSRFPILTA 174

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           ++          +  G R AV   + +  + + V  +H ++                  S
Sbjct: 175 RTV-----SPDSADTGGRFAVRYELLVGARTLIVYAVHPQTPRSP--------RMWRERS 221

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              + L   +   +    P V+AGD+N         D    T         +P       
Sbjct: 222 AYLRDLAQALRS-EPHDTPVVVAGDWNTASWSPFFKDLLSSTGYRTTESRWWPLPTRFSI 280

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +   PID  V+                    D +    K  S+H P+     
Sbjct: 281 RFGSWTQLGTPIDRIVLTPAVG--------------LDSLAMGPKFGSNHLPVIARLT 324


>gi|240172254|ref|ZP_04750913.1| hypothetical protein MkanA1_23264 [Mycobacterium kansasii ATCC
           12478]
          Length = 260

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 67/307 (21%), Gaps = 82/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ ++NI                     +   L    + +D D++ LQE+      +  
Sbjct: 1   MRVATFNILHGRTVGDG-----------VEVQRLCDCVRRIDPDVLALQEVDCDQPRSGR 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIH---------------TAIAVRKKNVRVLQQSY 128
                                 S                      IA+  +      Q  
Sbjct: 50  ADLTAAAAEAMGAVAHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRFPAASWQVV 109

Query: 129 PLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            L      F                 R AV   +      + V + HL      +     
Sbjct: 110 RLPRIPARFPMYLPGPDKVMIVDEEPRAAVIARLRTPLGTLTVANTHLSFVPGWN----- 164

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                     Q + L   +        P ++ GD N               + P      
Sbjct: 165 --------RWQLRRLAHDVRGFP---WPRLLTGDLN---------------LTPAAVRRW 198

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                 +             +D+ +   +    +   S   +             +SDH 
Sbjct: 199 SRMRPLATAATFPASAPDRQLDHIL-TDDPGLRVGAASAELMP------------ISDHR 245

Query: 297 PISIDYD 303
            + +D D
Sbjct: 246 ALLVDLD 252


>gi|166710588|ref|ZP_02241795.1| hypothetical protein Xoryp_03765 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 245

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 77/286 (26%), Gaps = 60/286 (20%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++ NI   S     S +               +    +         DIV LQE    + 
Sbjct: 2   LTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAALVGER--DIVGLQEADPGSL 59

Query: 80  VAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +    +  +    +     +H   R       +A  +  K   +  Q + L G      
Sbjct: 60  RSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPLEVQDHALPG------ 113

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R G R  +          + V   HL                 +    Q  ++ + ++  
Sbjct: 114 RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLAFIAELLSDH 160

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NANKNLRNKIP 256
             +    ++ GDFN   +                 L R  + +   C  +   + R    
Sbjct: 161 PNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCEVHTFPSWRPDRA 205

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID+ ++                    +  ++     SDH  + +D 
Sbjct: 206 IDHILVSDRL--------------VIEHTEATPAAFSDHLAVGMDI 237


>gi|189499147|ref|YP_001958617.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides BS1]
 gi|189494588|gb|ACE03136.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides BS1]
          Length = 256

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 71/303 (23%), Gaps = 76/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ SWNIN                   +    L  +      DI+ L+E+ +       
Sbjct: 1   MRIASWNING----------------IRARRDSLLGWIDRKKPDILVLEELKAQE----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K+      + +    +    +    ++ + +  K     +    +             
Sbjct: 40  --KDIPEEIVAMQGYKKYWNGSAFRKGYSGVGLLLKEGLCGECRLEIPEFDCENR----- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V ++G  + V+  ++                 ++       L  +I +      
Sbjct: 93  -----TVVLHGSNLSVIGTYVPRGDGDAHY--------AVKLGYLSDLGTYILELLREGR 139

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GD N                                         +    + +  
Sbjct: 140 QVIHTGDINVAHTDLDVHHSQNKPGIVGLRPEERAAIDRHLEIGLHDIMRERFPDKKDMF 199

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID F + +     ++           D      ++ SDH P+ 
Sbjct: 200 TWWPYWKGARERNLGWRIDCFYLSKGLIGDVV-----------DVRIDSAEKSSDHAPVI 248

Query: 300 IDY 302
           +D 
Sbjct: 249 LDI 251


>gi|19746888|ref|NP_608024.1| hypothetical protein spyM18_2049 [Streptococcus pyogenes MGAS8232]
 gi|19749132|gb|AAL98523.1| hypothetical protein spyM18_2049 [Streptococcus pyogenes MGAS8232]
          Length = 273

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 79/307 (25%), Gaps = 65/307 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++++ N +                 T      L ++      DI+ LQE+          
Sbjct: 3   KVLTLNTH-----------SWMQANTLKKLVALAEHILAEKYDIICLQEINQLIESELAT 51

Query: 85  PKNTWCIF----------------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +                                        +     +A+  K   
Sbjct: 52  DLPRYQALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPI 111

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L+ A    +    RRA+     I+G+++ V+ +HL  F      E     +  
Sbjct: 112 --HVSDTLVSAMADETDYHTRRALLGQTTIDGREVAVVSLHLSWFDKGFVEEWQRLEAA- 168

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                 Q L            P ++ GDFN      G        ++  DS         
Sbjct: 169 -----LQQL----------TCPVLLLGDFNNPSGQEGYELILKSPLELQDSHQAADYVFG 213

Query: 243 SRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                   +  ++ +    +D+    +          F+               +SDH  
Sbjct: 214 DHSIVAAIDGWEDNKEAFKVDHVFTSKA---------FTINSSKVTFDGGEAPVVSDHYG 264

Query: 298 ISIDYDF 304
           + +D ++
Sbjct: 265 LEVDLNW 271


>gi|25396127|pir||A88860 protein ZC518.3 [imported] - Caenorhabditis elegans
          Length = 828

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 96/351 (27%), Gaps = 74/351 (21%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  +     S   +          L+ +  +  +AD++ LQE+ +    
Sbjct: 441 TFTVLCYNVLCDKYATVNQYSYCPSWALNWEYRKGLIIKEIRTYEADVITLQEVETEQFR 500

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLL------- 131
               P+     +       + +K     +       A+  K  +       L        
Sbjct: 501 TLFQPELKQLGYAGIFEAKSRAKTMGEEERKYVDGCAIFWKVDKFDMDKQYLFEFSSVAM 560

Query: 132 ----GAKDSFSRAGNR--RAVELLVEIN---------------------GKKIWVLDIHL 164
                +++  +R   R    +  +++I                      G  + V   H+
Sbjct: 561 KKASTSENMLNRVMPRDNIGLCAVLKIKESVYANKFLGRMQIPMNDNVVGNPLVVATAHI 620

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT---QKKESLVPFVIAGDFNRKINYL--- 218
                     +       +L+ +   + + ++   Q  +  VP +I GDFN   +     
Sbjct: 621 HW---DPEFCDVKLVQSMMLTHEVSRVLEEVSKKYQITQQQVPVLICGDFNSLPDSGVFE 677

Query: 219 -------GNNDDFWKTIDPNDSLIRFPKEKDSRC-----------------NANKNLRNK 254
                         K+   +  L +F    D                      N  L  K
Sbjct: 678 YLSKGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYTLDFK 737

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDD---IKSRGKRLSDHCPISIDY 302
             IDY      +   L      +  + + +           SDH PI   Y
Sbjct: 738 GMIDYIFATPQSLARLGILGPFDPQWVQSNKILGFPHPHVASDHIPIMAQY 788


>gi|325106500|ref|YP_004276154.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
 gi|324975348|gb|ADY54332.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
          Length = 344

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/355 (10%), Positives = 94/355 (26%), Gaps = 67/355 (18%)

Query: 1   MIRKYVLALVFFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M++K +  ++  ++  +    + AQ+ +++ +NI                      ++ +
Sbjct: 1   MMKKQLFIILITVLTISVQNIAKAQEFKVLQFNIWQEGTTVDGG------------FSAI 48

Query: 58  RQYAKNLDADIVFLQEMGS------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                 LDAD++   E+ +         +A    K     +           R    D  
Sbjct: 49  VDEIIRLDADLIAFSEVRNYGQTKFNEKIADALAKQGKKFYSFYSYDSGILSRYPIIDHK 108

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
           T    +     + +    L G + +F  A             G          +    +D
Sbjct: 109 TIFPEKDDQGSLYKAIISLKGKQVAFYTAHLDYKYAANYLSRGYHSSTWKKLEQPVLNVD 168

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------ 225
           S+      S     +  +   +   ++ +     ++ GDFN   +     +         
Sbjct: 169 SILKDNLMS--QRDEAIKAFINDAFKESKQGRLVILGGDFNEPSHLDWTENTKHLFERKV 226

Query: 226 -------KTIDPNDSLIRFPKEKDSR-CNANKNL------------------RNKIPIDY 259
                    ++ N+ +  + ++  +   +                        ++  IDY
Sbjct: 227 AVRWSVPARLEANNFIDAYREKYPNNITHPGITFPVYNKNVDFKKLVWAPESDDRDRIDY 286

Query: 260 FVMDQNAYKFLIQ------------ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                N                            +  I  +G   +DH  +   +
Sbjct: 287 IFYYPNPKLKFKNIAMVGPQESIAFGEVILEKTKDPLILPKGIWPTDHRAVIATF 341


>gi|220909980|ref|YP_002485291.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425]
 gi|219866591|gb|ACL46930.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425]
          Length = 244

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 87/284 (30%), Gaps = 42/284 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +Q +R+ +WN++                 +      + Q  + ++AD+  L E  +    
Sbjct: 3   SQTLRIATWNLDH------------PKPGSWQKTPAILQQIEAINADVWILTETNNKAV- 49

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +  F S E    ++ +    + +T I  R +    + +++    +       
Sbjct: 50  --DLAAKGYEKFTSIE----YTDKGLEQNAYTTIWSRLQAPTQIIKTFDPDLSVCIKVSQ 103

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +   +           I        D    ++      +          I +  +
Sbjct: 104 PIDLMIYGTI-----------ITWHGDRGSDGTSKSWEEHYRSIQHHGDDWSRLIQEYSD 152

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++AGDFN+  +       +      +    +  +             N+  +D+ 
Sbjct: 153 HK--LLVAGDFNQARDGS---RWYGTQKGIDLLTAQLDRNHLVCLTDQIQPTNRGNVDHV 207

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            + Q+   F     +       ++I  +G +LSDH  + ID  F
Sbjct: 208 CISQDLQPFCTASFW-------NNISDQGVKLSDHNGVFIDLSF 244


>gi|310794037|gb|EFQ29498.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 635

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/338 (11%), Positives = 74/338 (21%), Gaps = 90/338 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ +WN   L                      + +  +   ADIV +QE  +   +   
Sbjct: 3   LRITTWNGEWL----------------QYTSEAMFEILE---ADIVIMQETKIQRKDLRD 43

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF--- 137
            +     W +F+S  +    +S             +R +         P           
Sbjct: 44  DMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCCPIRAEEGITGILPAPNSSTSFRDLPE 103

Query: 138 ---------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                             E  ++  G+ + VL+          S     S          
Sbjct: 104 AQQIGGYPRPDQLPGEVDEATLDSEGRCV-VLEFQAFVLIGTYSPAMRDSSRDDFRLGYL 162

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLG---------------------NNDDFWKT 227
             L   +     +    V+ GD N     +                       +   +  
Sbjct: 163 NALDARVRNLVAAGKQVVLTGDLNVIREEMDTCNVREALRKEGMSVEEWMGMPSRRLFNH 222

Query: 228 IDPNDSLI-------------------RFPKEKDSRCNANKNL----RNKIPIDYFVMDQ 264
           +  +  +                       +     C   K       N   IDY +   
Sbjct: 223 LVFDGRVTGERDEGREAPVLYDLTRIFHPTRLGMFTCWETKRNMRPANNGSRIDYILCSA 282

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               +                   G   SDHCP+  + 
Sbjct: 283 GIKDWFTGSDIQ-----------EGLMGSDHCPVYANL 309


>gi|229551812|ref|ZP_04440537.1| exodeoxyribonuclease III [Lactobacillus rhamnosus LMS2-1]
 gi|229314756|gb|EEN80729.1| exodeoxyribonuclease III [Lactobacillus rhamnosus LMS2-1]
          Length = 253

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 72/302 (23%), Gaps = 81/302 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N L                             LDAD   LQE        ++
Sbjct: 2   LKMISWNVNGLRAVLKKDFMT---------------IFNELDADWFCLQETKMQAGQVEL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  F             +    ++  A+  K+  +       +   D+  R    
Sbjct: 47  DLPGYYQYF-----------NYAERKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRI--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +++ ++  +        +               L            
Sbjct: 93  ------ITLEYPKFYLMTVYTPNSGGELKRLDYRQQWDRDFLAYTNELAA--------KK 138

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P V  GD N                          DF K ++     I   +        
Sbjct: 139 PLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQLNSG--FIDTFRHFYPDTVT 196

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDYFV                  Y +D         SDHCP+
Sbjct: 197 YSWWSYRFHARANNAGWRIDYFVASSAFQ-----------PYIQDAKILTQIMGSDHCPV 245

Query: 299 SI 300
            +
Sbjct: 246 EL 247


>gi|218202527|gb|EEC84954.1| hypothetical protein OsI_32178 [Oryza sativa Indica Group]
          Length = 619

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/348 (12%), Positives = 77/348 (22%), Gaps = 81/348 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA- 81
           V++V++N+N L  +                   LR+    LDADI+  QE   S   ++ 
Sbjct: 2   VKIVTYNVNGLRPRVAQHG-------------SLRRLLDALDADIICFQETKLSRQDLSG 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-----NVRVLQQSYPLLGAKDS 136
            V     +  F S  R        S       +               ++ +  L     
Sbjct: 49  DVIMAEGYEAFISCNRSSKGRGAYSGVATFCRVTSAFSSQEVGLPVAAEEGFTGLQETAK 108

Query: 137 FSRAGNRRAVELLVE--------------INGKKIWVLDIHLKSFCF---LDSLENTYSP 179
            S       +   VE              ++ +   V+  H     F     ++E     
Sbjct: 109 NSETIGDFVLVTPVEEEGLGEVTKEELLKVDNEGRCVITDHGHFVLFNIYGPAVEEDDIE 168

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKT 227
                    + L+              + GD N   + +                     
Sbjct: 169 RVRFKLLFYKILQRRWEHLLALGKRVFVVGDLNIAPSSIDRCDAQPGFEKQTFRKWLRSM 228

Query: 228 IDPNDSLIRFPKEKDSRCNANKN-----------LRNKIPIDYFVMDQNAYKFLIQE--- 273
           +  +                                    ID+ ++    +         
Sbjct: 229 LREHGGPFFDAFRSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDH 288

Query: 274 ---SFSEILYNEDDIKSRGK---------------RLSDHCPISIDYD 303
                        D   RG                  SDH P+ I  +
Sbjct: 289 SIFPCHVEECEIMDHFRRGNSKNMSMWKGGRSSKLEGSDHIPVYIVLN 336


>gi|115480379|ref|NP_001063783.1| Os09g0536000 [Oryza sativa Japonica Group]
 gi|50726587|dbj|BAD34221.1| AP endonuclease 2-like [Oryza sativa Japonica Group]
 gi|113632016|dbj|BAF25697.1| Os09g0536000 [Oryza sativa Japonica Group]
 gi|215736944|dbj|BAG95873.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 619

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/348 (12%), Positives = 77/348 (22%), Gaps = 81/348 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA- 81
           V++V++N+N L  +                   LR+    LDADI+  QE   S   ++ 
Sbjct: 2   VKIVTYNVNGLRPRVAQHG-------------SLRRLLDALDADIICFQETKLSRQDLSG 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-----NVRVLQQSYPLLGAKDS 136
            V     +  F S  R        S       +               ++ +  L     
Sbjct: 49  DVIMAEGYEAFISCNRSSKGRGAYSGVATFCRVTSAFSSQEVALPVAAEEGFTGLQETAK 108

Query: 137 FSRAGNRRAVELLVE--------------INGKKIWVLDIHLKSFCF---LDSLENTYSP 179
            S       +   VE              ++ +   V+  H     F     ++E     
Sbjct: 109 NSETIGDFVLVTPVEEEGLGEVTKEELLKVDNEGRCVITDHGHFVLFNIYGPAVEEDDIE 168

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKT 227
                    + L+              + GD N   + +                     
Sbjct: 169 RVRFKLLFYKILQRRWEHLLALGKRVFVVGDLNIAPSSIDRCDAQPGFEKQTFRKWLRSM 228

Query: 228 IDPNDSLIRFPKEKDSRCNANKN-----------LRNKIPIDYFVMDQNAYKFLIQE--- 273
           +  +                                    ID+ ++    +         
Sbjct: 229 LREHGGPFFDAFRSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDH 288

Query: 274 ---SFSEILYNEDDIKSRGK---------------RLSDHCPISIDYD 303
                        D   RG                  SDH P+ I  +
Sbjct: 289 SIFPCHVEECEIMDHFRRGNSENMSMWKGGRSSKLEGSDHIPVYIVLN 336


>gi|301753387|ref|XP_002912543.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
           [Ailuropoda melanoleuca]
          Length = 660

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 291 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 350

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 351 YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFTLVQKHTVEFNQV 410

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 411 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP 470

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 471 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 530

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 531 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 590

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 591 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 635


>gi|297158894|gb|ADI08606.1| integral membrane protein [Streptomyces bingchenggensis BCW-1]
          Length = 355

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 70/281 (24%), Gaps = 62/281 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+++ N+      +G                 L    +    D+V +QE  +      
Sbjct: 135 QLRVLTANLEFGGATKG-----------------LVDAVRREKPDLVSVQECDTR----- 172

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                        E            D     A+                A  S   A  
Sbjct: 173 --CGAALDSAALREAYPYRKVITVPGDAAHGSAILSTYPLT-------PEAGISGKLAMP 223

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     +V I G+++ V   H                   +   +   L+ +        
Sbjct: 224 R----AVVRIAGRRLHVQVAHPMPPMPGQ---------LDVWRTELGRLRAYAAD--RGD 268

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P +IAGDFN   ++          +  +   +   +                 ID+ ++
Sbjct: 269 EPTLIAGDFNATQDHAAFRSLLDTGMRDSARAVGMSRTPSWPT--LTTPALGAQIDHVLV 326

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       F ++ +             DH  + +D +
Sbjct: 327 SDALRPR--AARFLDLPHT------------DHRALLVDLE 353


>gi|315173255|gb|EFU17272.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1346]
          Length = 351

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KLAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|189069263|dbj|BAG36295.1| unnamed protein product [Homo sapiens]
          Length = 423

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 72/298 (24%), Gaps = 46/298 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  +N+N         +   S  R       L  +      D+  L+E+ S      +
Sbjct: 9   LRI--FNLN------CWGIPYLSKHRAD-RMRRLGDFLNQESFDLALLEEVWSEQDFQYL 59

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFS 138
             K +             +    +  I + + V  K+                       
Sbjct: 60  RQKLS--------PTYPAAHHFRSGIIGSGLCVFSKHPIQELTQRIYTLNGYPYMIHHGD 111

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +    L++ ++G  +     HL +               +    QA  L  +I   
Sbjct: 112 WFSGKAVGLLVLHLSGMVLNAYVTHLHA-----EYNRQKDIYLAHRVAQAWELAQFIHHT 166

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--------- 249
            +     ++ GD N             K            ++       N          
Sbjct: 167 SKKADVVLLCGDLNMHP--EDLGCCLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVS 224

Query: 250 -----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     + IDY +  +    F I                RG  LSDH  +    
Sbjct: 225 QQELKPFPFGVRIDYVLY-KAVSGFYISC--KSFETTTGFDPHRGTPLSDHEALMATL 279


>gi|165932926|ref|YP_001649715.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa]
 gi|165908013|gb|ABY72309.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa]
          Length = 261

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/279 (11%), Positives = 68/279 (24%), Gaps = 56/279 (20%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                LLR+ A     DI+ LQE    +++               + +       S    
Sbjct: 2   RLRIDLLRKLAYEHQPDIILLQETKVADSL---------FPLEVIKNIGYEHVIYSGQKS 52

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
           +  +A+  K       S  L  +         R    ++ +I     +V           
Sbjct: 53  YNGVAIISKFPLNNVFSLELYNSDK-------RHIAAMVNDIEIHNFYV-------PAGG 98

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------- 219
           D  +   +       +  + +++W+T  +      +I GD N   +              
Sbjct: 99  DIPDIEVNTKFKHKLEYIRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVI 158

Query: 220 -----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----------PIDYFVMDQ 264
                      +  +    +                   +            +D+  +  
Sbjct: 159 SHTDIERSLLVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSD 218

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           N    L          +           SDH P  + ++
Sbjct: 219 NLKGAL-------FSMHLLSEARDWFSPSDHVPYFVTFN 250


>gi|306826582|ref|ZP_07459889.1| RgfB protein [Streptococcus pyogenes ATCC 10782]
 gi|304431220|gb|EFM34222.1| RgfB protein [Streptococcus pyogenes ATCC 10782]
          Length = 272

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 80/307 (26%), Gaps = 65/307 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++++ N +                 T      L ++      DI+ LQE+          
Sbjct: 3   KVLTLNTH-----------SWMQANTLKKLVALAEHILAEKYDIICLQEINQLIESELAT 51

Query: 85  PKNTWCIF----------------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +                                        +     +A+  K   
Sbjct: 52  DLPRYQALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPI 111

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L+ A D  +    RR++     ++GK++ V+++HL  F               
Sbjct: 112 --HVSDILVSAMDDETDYHTRRSLIAKTRLDGKEVAVVNVHLSWFDKG------------ 157

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    +    +      P ++ GDFN      G        +D  DS         
Sbjct: 158 ----FLGEWEKLEKELLTLNCPLLLMGDFNNPTAQDGYQVMMGSPLDLQDSHKVADHVFG 213

Query: 243 SR---CNANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 + +    NK  +  D+    ++      + +F                +SDH  
Sbjct: 214 DHSIVADIDGWQGNKEALKVDHVFTSKDCIIRSSKITFE---------GGDAPVVSDHYG 264

Query: 298 ISIDYDF 304
           + +  D+
Sbjct: 265 LEVTLDW 271


>gi|281206753|gb|EFA80938.1| hypothetical protein PPL_06173 [Polysphondylium pallidum PN500]
          Length = 2081

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/304 (10%), Positives = 73/304 (24%), Gaps = 56/304 (18%)

Query: 22   QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV 80
             +++++SWN+   +                        Y +    DI+ LQE     + V
Sbjct: 1248 NQLKIMSWNVAGFNSCTKKGFK---------------AYVEQEQPDILCLQETKILPSKV 1292

Query: 81   AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             K      +   +S  R            +     + K     +      +G        
Sbjct: 1293 PKDAIPKGYEYHFSACRKTWIPWYWVRILLLFDFLLTKVKPISVT-----MGMGVGKHDK 1347

Query: 141  GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
              R      +    +K ++++ ++ +               +        L  ++ +   
Sbjct: 1348 EGRI-----ITAEYEKFYLVNTYVPNSGVDRKTPLARLDYRTKEWD--VDLFKYMHE-LN 1399

Query: 201  SLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRC 245
               P +  GD N     +                     +     +  +  F      + 
Sbjct: 1400 KKKPVIWTGDLNVAHKEIDLKNPKGNVRTAGFTVEERTSFSGFLESGFVDTFRHFNPKKE 1459

Query: 246  NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                                +DYF++    +   +  SF        D        S   
Sbjct: 1460 FQYTFWSYMRNSRASNAGWRLDYFIV-PLTFIGSVAHSFIRSKVTGSDCLFIRYTHS--Y 1516

Query: 297  PISI 300
            PI +
Sbjct: 1517 PIIL 1520


>gi|145344271|ref|XP_001416660.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576886|gb|ABO94953.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 269

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 67/302 (22%), Gaps = 64/302 (21%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT 88
           WN+  L                      LR        D+V LQE          F +  
Sbjct: 2   WNVAGLRSF------------HEKSLDRLRGVIAGEAPDVVILQEHKLQETHCAAFTERL 49

Query: 89  WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
              F                  ++ +A       +  +     G          R     
Sbjct: 50  RRDF--PMYKTVQFAVSVAKKGYSGVATYDGPKLLEIRE----GLGARGYTDEGR----- 98

Query: 149 LVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
            + +  +  +++  ++ +       L+         +    + L        ++  P V 
Sbjct: 99  TMTLEFEGFYLVTAYVPNSGQDLKRLDYRIGEWERDMRAHLKEL--------DAKKPVVY 150

Query: 208 AGDFNRKINYLG------------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            GD N                           + F   ++ ND    F            
Sbjct: 151 MGDLNVAHLDSDIWNVGASHIKKSAGTTPQEREAFGVMLEENDLRDAFRHFHGDAVGWFS 210

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DY +  +  +            +  D +       SDH P+ +
Sbjct: 211 YWSVRAGNRPFNKGLRLDYTLASKRVFDGGADGVEVVDAFILDKVL-----GSDHAPVGV 265

Query: 301 DY 302
             
Sbjct: 266 TL 267


>gi|327270084|ref|XP_003219821.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Anolis
           carolinensis]
          Length = 366

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 85/288 (29%), Gaps = 48/288 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + L++WNI+ L  +                   +  Y      D+VFLQE+        
Sbjct: 117 TLSLITWNIDGLDLKN-----------LPERARGVCSYIALYSPDVVFLQEV-------- 157

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    +     +       + +   TAI ++K  V++++              +  
Sbjct: 158 ---IPPLFDYLQKRAVSYTIIPGNTDAYFTAIMLKKSRVKIIKHEIIRFPTT-----SMM 209

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  + +   + G ++  +  HL+S                    Q + +   + +     
Sbjct: 210 RNLLAVHATVFGNELCFMTSHLEST----------KDHGEERLNQLKMVLAKMKE-VPES 258

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKIP 256
              +  GD N +   +         I      +       +  +     N       K+ 
Sbjct: 259 TTVIFGGDTNLRDKEVAKIGGLPNNILDIWEFLGKPEHCKYTWDTSQNTNLEARYNCKMR 318

Query: 257 IDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            D   +   +A   +I +S   I     +    G+  SDH  +  ++D
Sbjct: 319 FDRLFLRAASAGGQIIPQSLDLIGL---EKLDCGRFPSDHWGLFCNFD 363


>gi|262282134|ref|ZP_06059903.1| RgfB [Streptococcus sp. 2_1_36FAA]
 gi|262262588|gb|EEY81285.1| RgfB [Streptococcus sp. 2_1_36FAA]
          Length = 271

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 67/278 (24%), Gaps = 54/278 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLAERILQEKYDVICLQEVNQLMESEQVVQAPFYQAVEGAIAIHQDHFALCLVKK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  + +  KN    ++   L+   +       R+ +  
Sbjct: 78  LTEAGLDYHWSWAYNHIGFDIYNEGVTILSKNPLTPKEV--LVSEVNDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E +                    +  +   P V+ 
Sbjct: 136 ETEVEGQLMTIASCHLSWWDKGFQGEWSKLE----------------EELVKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN  ++Y G        +   DS     K                      IDY    
Sbjct: 180 GDFNNPVDYEGYQHILKSPLKLQDSHKVARKISGKATVEGAIAGWDGNQDALKIDYIFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           Q          F                +SDH  I ++
Sbjct: 240 QGIQIESSAVVFDGKETPV---------VSDHFGIEVE 268


>gi|257081282|ref|ZP_05575643.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis E1Sol]
 gi|256989312|gb|EEU76614.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis E1Sol]
          Length = 358

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 84/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K+L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKDLPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFSIKGTDKELVVFNLHLEAYDNGEG------- 232

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 233 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 290

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 291 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 346

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 347 --------DHQPVKME 354


>gi|239940613|ref|ZP_04692550.1| hypothetical protein SrosN15_06428 [Streptomyces roseosporus NRRL
           15998]
 gi|239987095|ref|ZP_04707759.1| hypothetical protein SrosN1_07297 [Streptomyces roseosporus NRRL
           11379]
 gi|291444050|ref|ZP_06583440.1| endonuclease/exonuclease/phosphatase [Streptomyces roseosporus NRRL
           15998]
 gi|291346997|gb|EFE73901.1| endonuclease/exonuclease/phosphatase [Streptomyces roseosporus NRRL
           15998]
          Length = 254

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 67/279 (24%), Gaps = 52/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N+ +L                  D   L +  +    D+V +QE   +    K 
Sbjct: 22  IRVLSYNVRSL----------------HDDTAALARVIRACAPDLVLVQEAPRFFRWRKA 65

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +               S   +        ++R +  R      PL            R
Sbjct: 66  AARLARSSDLVVL-----SGGATAAGPLLLCSLRARVERTEDVLLPLTPGLHR------R 114

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V I G ++ VL  HL             S        QA  L + +        
Sbjct: 115 GFATAVVRIAGARLGVLSCHL-------------SLQRDERLAQADRLLEQLASMGVEHA 161

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V  GD N                   +                     +  ID     
Sbjct: 162 --VAGGDLNDVPTGKAFRHL------AGELQDCRAVAPWGGELTFPPDEPRKRIDAVFAT 213

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                            ++ D+    +  +DH P+    
Sbjct: 214 PGIEVLGCGVPAGLPGVSDTDL----RAATDHLPVLAAL 248


>gi|260798967|ref|XP_002594471.1| hypothetical protein BRAFLDRAFT_124956 [Branchiostoma floridae]
 gi|229279705|gb|EEN50482.1| hypothetical protein BRAFLDRAFT_124956 [Branchiostoma floridae]
          Length = 561

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 82/337 (24%), Gaps = 89/337 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++WNIN                   +    L+Q   +LDADIV LQE  +       
Sbjct: 1   MRILTWNING----------------VRATKEPLKQVLDSLDADIVCLQETKVTRDQLDE 44

Query: 82  KVFPKNTWCIFYSTER-LINHSKRDSNNDIH----------TAIAVRKKNVRVLQ---QS 127
                  +  ++S  R    +S   +               T +   +K   ++      
Sbjct: 45  ASAIVEGYSSYFSFSRVRSGYSGVATYCKDGATPIKAEEGLTGLLTNQKEEDIIGCYGDQ 104

Query: 128 YPLLGAKDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                 +        R  +    + + +GK+  +  I++         E           
Sbjct: 105 TMFTEDELRLLDKEGRAVITQHTIRDTDGKECSLAVINVYCPRADPEKEERKDFKLR--- 161

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP- 230
              + L+       ++    ++ GD N                 +         + +   
Sbjct: 162 -FYRLLQTRAQALLQAGSHVIVLGDVNTSHKPIDHCDPDDIEYFSENPGRKWLDQFLLDP 220

Query: 231 ---------------------NDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQN 265
                                        +     C +             IDY   ++ 
Sbjct: 221 HQTGDSGSSESEKGPGGYFVDTFRFFHPTQRSAFTCWSTVTGARQTNYGTRIDYIFANRA 280

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   +    +             SDHCP+  + 
Sbjct: 281 LLNQFQDCTIMPEV-----------EGSDHCPVRGEL 306


>gi|145220907|ref|YP_001131585.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK]
 gi|315442122|ref|YP_004075001.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1]
 gi|145213393|gb|ABP42797.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK]
 gi|315260425|gb|ADT97166.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1]
          Length = 249

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 71/278 (25%), Gaps = 49/278 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + ++NI   +                  Y  L        AD++  QE+        +
Sbjct: 5   LTVSTFNIWFDAYFAD------------ERYRALADLLAAHPADVMVFQEVTDRALDVLL 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   + +                +  + +  +          L  A         R
Sbjct: 53  AQPWIRRDYAAAAVTGRRVG-------NYGMLLLSRIPLSQVTYTRLPTAAH-------R 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +  ++   G +  +  +HL S             + +L ++Q +     I  +     
Sbjct: 99  GFLTAVLISGGTETVLCSVHLDSG----------KRNSALRARQFRE----IDAEFAHAD 144

Query: 204 PFVIAGDFNRKINYLG----NNDDFWKTIDPNDS-LIRFPKEKDSRCNANKNLRNKIPID 258
             V+ GDFN + +          D W  +   +            RC+A    R     D
Sbjct: 145 DVVLLGDFNMRDDENSRITAPWCDVWPALRAPEPGFTEDTSINHMRCDATGKERFV-RFD 203

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             ++          +S   I              SDH 
Sbjct: 204 RVLVKGE---QWRPDSVELIGTEPISPAHPRVFPSDHF 238


>gi|21241492|ref|NP_641074.1| hypothetical protein XAC0721 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106837|gb|AAM35610.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 245

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 79/286 (27%), Gaps = 60/286 (20%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++ NI   S     S +               +    + +       DIV LQE    + 
Sbjct: 2   LTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGER--DIVGLQEADPGSL 59

Query: 80  VAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +    +  +    +     +H   R       +A  +  K   V  Q + L G      
Sbjct: 60  RSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHALPG------ 113

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R G R  +          + V   HL                 +    Q  ++ + ++  
Sbjct: 114 RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLAFIAELLSDH 160

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NANKNLRNKIP 256
             +    ++ GDFN   +                 L R  + +   C  +   + R    
Sbjct: 161 PNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCDVHTFPSWRPDRA 205

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID+ ++  +                 +  ++     SDH  + +D 
Sbjct: 206 IDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 237


>gi|294674042|ref|YP_003574658.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
 gi|294473884|gb|ADE83273.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
          Length = 320

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/320 (10%), Positives = 81/320 (25%), Gaps = 59/320 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLDAD------- 67
           +  +N+  L +        +             ++       + +   ++  D       
Sbjct: 4   IGFYNLENLFDTTHDEGKNDYEFLPEGSFKWDAEKYKCKLHNMARVLADMGTDKLPEVGC 63

Query: 68  -IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             + + E+ +   +  +  +       +      H +      I  A+    +  +V   
Sbjct: 64  AAIGVAEVENAKCLTDLCNQP---ALKARNFKFVHIEGPDQRGIDCALLYNPQLFKVNHV 120

Query: 127 S-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
              P +  +   +    R  + +   +  + + ++  HL S                   
Sbjct: 121 KLVPYIYNRPEDAGRATRGFLVVSGTMAKEHVTIIVNHLPSRGAPSYAREDG-------G 173

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKE 240
            Q + +KD + +  +  V   I GD N   N                ++       +   
Sbjct: 174 SQLRVVKDSLQKD-DPKVKLFIMGDMNDDPNDASMAKCLGARREMSEVEEGGLYNPWWNM 232

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---------- 290
             S     +        D  ++  N      +E +S +   +  +  R            
Sbjct: 233 LASGQGTLQFQGAWNLFDQIILSSNLLNKSGKEDYSTLKLFDYQVFRRDYLIQQEGAYRG 292

Query: 291 -------------RLSDHCP 297
                          SDH P
Sbjct: 293 NTLRTTAGGKWQNGYSDHLP 312


>gi|164424776|ref|XP_963273.2| hypothetical protein NCU05341 [Neurospora crassa OR74A]
 gi|157070656|gb|EAA34037.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 249

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 62/239 (25%), Gaps = 15/239 (6%)

Query: 68  IVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           ++ +QE+ +   V       + W                S            +N      
Sbjct: 16  LICMQEVLNEQLVDLQSDLGSNWNHVGVGRNDGAQDGEYSPIIYQADTWRLDRNKTYWLS 75

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             P +     +  A  R       +     + ++ +      F        + S  L+ +
Sbjct: 76  QTPHVVGSTGWDAALPRIVTVAQFKHRTTDVPLVFMCTH---FDHMGTVARNESAKLIIK 132

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRFPKEKD 242
            A               P  + GD N ++   GN        ++ I        +     
Sbjct: 133 IADEWM-VQGSNSTKPAPVFLGGDLNLELTEEGNKTLTTPGAFQDIKDLVPKTHWYGNAK 191

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +  +   +  + + IDY  +                 +        G  +S+H P+ +D
Sbjct: 192 TSTSFTTSTLDDMRIDYLFVRNPRGIQFSTYGVLTNKF------EDGVYISNHRPVVVD 244


>gi|212550466|ref|YP_002308783.1| exodeoxyribonuclease III [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548704|dbj|BAG83372.1| exodeoxyribonuclease III [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 253

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 88/302 (29%), Gaps = 72/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+N +                      L ++      DI  +QE+ +      +
Sbjct: 1   MKIISFNVNGIRSAINKG---------------LIEWLDKESPDIFCVQEIKAQREQIDI 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    + +          +    ++ +A+  K       +Y     K SF   G  
Sbjct: 46  LS-------FQSLGYNYQLVHSARRKGYSGVAIFSK---TCPNTYSFGMNKYSFDNEGR- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++  +   + ++ +++ S       +       ++  +       ++   +    
Sbjct: 95  -----VIRADFNNLTIICVYVPSGTTGKVRQ-------AIKMEFLDTFTTYLLNLQRERP 142

Query: 204 PFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNANK 249
             ++ GD+N        N                 W         +   +E +   N   
Sbjct: 143 YLLVCGDYNICRQDRDINYPERHMGVSGFLPEERAWFDYFIRCGFVDSFREFNQDKNQYS 202

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY ++ +N    L   S  + +            +SDHCPI +
Sbjct: 203 WWSYRSNARAKNLGWRIDYHIITRNLQSQLKSASLLQEI-----------EISDHCPIVV 251

Query: 301 DY 302
           ++
Sbjct: 252 EF 253


>gi|116618622|ref|YP_818993.1| exonuclease III [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|116097469|gb|ABJ62620.1| Exonuclease III [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 272

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/305 (8%), Positives = 78/305 (25%), Gaps = 59/305 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWNI++++        ++   R    ++ L +    +  D+  +QE    +    +
Sbjct: 1   MKFISWNIDSINA-----AVEHKSVRGEMTWSTLNE-IATIRPDVFAIQETKLKS--TGL 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K    I         +    +    ++   V  K      +                R
Sbjct: 53  TKKQATAIAELFPEYHLYVNSSTARSGYSGTMVLSKVEPTQVE--YPTIGAPGSMDLEGR 110

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     ++  ++  +                   +  + L        ++  
Sbjct: 111 I-----ITLEFPTFFLSTVYTPNSGSSLIRLPERGEWDDKYREYIKTL--------DATK 157

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P + +GD N                         + +  +        F        +  
Sbjct: 158 PVIFSGDMNVAHQEIDLKNPKPNRHSAGFTDQEREKFSALLDAGFTDTFRSLNPDTPSVY 217

Query: 249 KNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                         +   IDY+++     + + +    +    +           DH PI
Sbjct: 218 TWWAQISKTSKINNSGWRIDYYLVSDRIAENVTESCVIDTGARQ-----------DHAPI 266

Query: 299 SIDYD 303
            ++ +
Sbjct: 267 LLEIN 271


>gi|21911431|gb|AAM80554.1| StaP [Streptomyces toyocaensis]
          Length = 280

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 81/298 (27%), Gaps = 61/298 (20%)

Query: 10  VFFLVPCTAS-VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           +F  +P   +  A  + +VS N+   +     +                 +      AD+
Sbjct: 41  LFGGLPGGPTDQAGDLMVVSHNVAVENPDPAGT----------------ARDLAASGADL 84

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + LQE+                   S E+ +  +      +    +  +           
Sbjct: 85  LALQELTDQTKA-------------SYEKELAKTYPHYAEEGTVGLWSKLPLSGTRPVEP 131

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
           P+  A+         RA+   V      + V   HL S      +              A
Sbjct: 132 PVGKAQQDGIPVQPLRALRTTVATEEGPLTVYVAHLGSVR----VMPRGGFWTESRDADA 187

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L + +  ++      ++ GDFN  ++         +  D   S +R  ++        
Sbjct: 188 TKLAEAVAAERSK--RVLVLGDFNGTLDD--------RAFDGLTSQLRSSQDVAGDGFGF 237

Query: 249 KNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     ID  ++       +   S   +           +  SDH P++    +
Sbjct: 238 SWPAKFPVARIDQILVRG-----VEPTSAWLLP----------RTGSDHRPVAARISW 280


>gi|315171967|gb|EFU15984.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1342]
          Length = 351

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPNLGEAGWAPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|307272049|ref|ZP_07553314.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0855]
 gi|306511269|gb|EFM80274.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0855]
          Length = 351

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|281312469|sp|A8XU68|TDP2_CAEBR RecName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA
           phosphodiesterase
 gi|309357072|emb|CAP36193.2| hypothetical protein CBG_18823 [Caenorhabditis briggsae AF16]
          Length = 337

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 88/291 (30%), Gaps = 44/291 (15%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            ++S   ++ L+SWNI+ L  +   +               +    K ++ DI+FLQE+ 
Sbjct: 86  PSSSAGFELSLMSWNIDGLDGRSLAT-----------RMKAVATIVKKVNPDILFLQEVV 134

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             +       ++ + I+YS +              +TAI V  K   V +          
Sbjct: 135 DRDLEPIDKLQSLYKIYYSNKGC----------QYYTAILV-SKMFEVEKHDV-----VH 178

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             +    R    +   I G K+++++ HL+S     +        C     +        
Sbjct: 179 FQNSGMYRTLQIVEGSIGGMKVFLVNTHLESMRDHRAQRMAQFSFCMDRCAEIIA----- 233

Query: 196 TQKKESLVPFVIAGDFN--RKINYLGNNDDFWKTIDPN-DSLIRFPKEKDSRCNANKNLR 252
                        GD N   +      +      +    D+  ++  +     N      
Sbjct: 234 ---NNPGCFLFFGGDLNLRDEEISSIPDGVLDAWVSAGCDTKTKWTWDTYKNDNKQGFNG 290

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            K+  D         +        +       I+S     SDH  I+  + 
Sbjct: 291 AKMRFDRIYWHGPFNQVHFSLEGRQ------RIRSCLCFPSDHWAINATFS 335


>gi|257083939|ref|ZP_05578300.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Fly1]
 gi|256991969|gb|EEU79271.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Fly1]
          Length = 358

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 232

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 233 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 290

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 291 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 346

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 347 --------DHQPVKME 354


>gi|256962544|ref|ZP_05566715.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis
           HIP11704]
 gi|256953040|gb|EEU69672.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis
           HIP11704]
          Length = 358

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 232

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 233 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 290

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 291 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 346

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 347 --------DHQPVKME 354


>gi|194228453|ref|XP_001915550.1| PREDICTED: similar to DNase X (predicted) [Equus caballus]
          Length = 305

 Score = 67.3 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/283 (10%), Positives = 69/283 (24%), Gaps = 27/283 (9%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAV 80
           +  R+ ++N   L+          +          L +       DI+ LQE+  S  + 
Sbjct: 17  EAFRICAFNAQRLTL---------AKVAREHVMDTLVRILARC--DIMVLQEVVDSSGSA 65

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +  +       S       S     +          ++ +     + L   +D     
Sbjct: 66  IPLLLRELKRFDGSGPYDFLSSPPLGRSTYKEQYVYIYRSHKTRALDHYLYNDED---DL 122

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R        +  K +  L +        D            L+       D   + + 
Sbjct: 123 FAREPFVAQFTLPSKVLPSLVLVPLHTTPKDVE--------KELNALYDVFLDVSQRWQS 174

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++ GDFN     L         +           + +              I   
Sbjct: 175 KD--VILLGDFNADCASLNKKHLGELVLRTQAGFHWAIADGEDTTVRASTHCTYDRI--V 230

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +     L   +  +        +     +SDH P+ ++  
Sbjct: 231 LHGERCQSLLHAAATFDFPRRFQLTEEEALNISDHYPVEVELS 273


>gi|297199226|ref|ZP_06916623.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297147327|gb|EFH28583.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 349

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 79/299 (26%), Gaps = 70/299 (23%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L   L+    +    + + + N+N  +     +                 +      A
Sbjct: 114 LNLFGGLLSDKNATGGDLTVATHNVNADNADPSGT----------------ARDVAASGA 157

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V L+E+             T       E+ +  + +    +    +  +     V   
Sbjct: 158 DVVALEEL-------------TASAVPVYEKALASTYKYHAVEGTVGLWSKDPLTGVQAV 204

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
              L   +          A+   V     ++ V   HL S         T         +
Sbjct: 205 DIKLGWTR----------AMRATVSAPDGQVAVYVAHLPSVRVKMEAGFT----ARQRDK 250

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            A  L + I   +      ++ GD N  +N         + ++   S +R  +       
Sbjct: 251 SADALGEAIADDRLPRK--ILLGDLNGTMND--------RALNAVTSQMRSTQGAAGSGF 300

Query: 247 ANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       ID  ++     + +   S   +           +  SDH P++    
Sbjct: 301 GFSWPASFPMARIDQIMV-----QGVKPVSSWTLP----------ETGSDHLPVAARVS 344


>gi|257468371|ref|ZP_05632465.1| hypothetical protein FulcA4_03459 [Fusobacterium ulcerans ATCC
           49185]
 gi|317062644|ref|ZP_07927129.1| dnase I-like protein dhp2 precursor [Fusobacterium ulcerans ATCC
           49185]
 gi|313688320|gb|EFS25155.1| dnase I-like protein dhp2 precursor [Fusobacterium ulcerans ATCC
           49185]
          Length = 274

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 91/303 (30%), Gaps = 42/303 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K  L  ++FL+  T    +   + S+N   L              ++  DY L  Q  
Sbjct: 1   MKKIKLVFIYFLLAMTIFAQEGY-IASFNTLRLG-------------KSQKDYILTAQAL 46

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           +    DI  L E+     V K+               +  +    ++   + A   +K  
Sbjct: 47  EMF--DIAGLIEVMDAEGVEKLINALEKVSGEKWDYHISPYPVGKNSYKEYFAYVWKKDK 104

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V  L++       ++       R       +I       + +         S+      +
Sbjct: 105 VEFLKERGFYKDTEE----KFARPPYGADFKIGEFDFTFVLV--------HSVFGKNESA 152

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---WKTIDPNDSLIRF 237
               + +   + D+           +IAGDFN                K I     +I+ 
Sbjct: 153 RRAEAFKMNEVYDYFQNLDLKENDVIIAGDFNLSGFDESFEKLLSHPDKIIYALSPVIKT 212

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              K S  ++          D   +     K    +S   + + +   +    ++SDH P
Sbjct: 213 TLGKKSLASSY---------DNMFLSTIYTKEFTGKS-GALDFTQGQYRLMKDKISDHLP 262

Query: 298 ISI 300
           I I
Sbjct: 263 IFI 265


>gi|302550957|ref|ZP_07303299.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302468575|gb|EFL31668.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 349

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 90/313 (28%), Gaps = 83/313 (26%)

Query: 3   RKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           R+   AL+  L+P                +    + +V+ N+N  +     +        
Sbjct: 97  RRSATALIAVLLPSVVWLNLFGGQLTDKTASGGDLTVVTHNVNAENPDPSGT-------- 148

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
                    +      AD++ L+E+             T     + E+ +  + R  +  
Sbjct: 149 --------ARDVAASGADVLALEEL-------------TPDAVPTYEKALASTYRYHSVQ 187

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +  +          YPL G +D     G  RA+   V     ++ V   HL S   
Sbjct: 188 GTVGVWSK----------YPLTGVRDVDIDLGWTRAMRAAVTAPAGQVAVYVAHLPSVRV 237

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                 T           A +L + I  +       V+ GD N  +N         + ++
Sbjct: 238 KMEAGFTARQRDRS----ADFLGEAIAHEPLKN--VVLLGDLNGTMND--------RALN 283

Query: 230 PNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
              S +R  +                   ID  ++       L  ES   +         
Sbjct: 284 AVTSQMRSTQGAAGNGFGFSWPASFPMARIDQIMVKG-----LKPESSWTLP-------- 330

Query: 288 RGKRLSDHCPISI 300
             +  SDH PI+ 
Sbjct: 331 --QTGSDHLPIAA 341


>gi|158517963|ref|NP_001103498.1| hypothetical protein LOC560386 [Danio rerio]
 gi|157422796|gb|AAI53318.1| Zgc:171797 protein [Danio rerio]
          Length = 558

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/352 (10%), Positives = 94/352 (26%), Gaps = 72/352 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++ +N+  +  + ++      +     +     + Q   N +ADI+ LQE+ +     
Sbjct: 189 LTVMCYNVLCDKYATRQLYGYCPSWALNWSYRKKSIMQEILNCNADIISLQEVETEQYFD 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               + +   +       + ++  S +D       AI  + +   V+Q+           
Sbjct: 249 FFLLELSKQGYDGFFSPKSRARTMSESDRKHVDGCAIFYKTEKFNVVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN-------------------GKKIW-----VLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                   GK I      +L +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELKKELIEVSSGKSIHPMEKQLLLVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV--------PFVIAGDFNRKINY-------- 217
            +       +   + + + D  ++  +           P V+  D N   +         
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRSLKHSSVSGETSSIPLVLCADLNSLPDSGVVEYLST 428

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                 + DF +    +         K+S                        N     +
Sbjct: 429 GGVDCTHKDFKELRYSDSLTNFNCNGKNSTSNGRITHAFKLKSAYENGLMPYTNYTFDFR 488

Query: 255 IPIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
             IDY            +          E++I         SDH  +    +
Sbjct: 489 GVIDYIFYSRPQLNVLGVLGPLDTNWLLENNISGCPHPLIPSDHFSLFAQLE 540


>gi|332367379|gb|EGJ45112.1| RgfB protein [Streptococcus sanguinis SK1059]
          Length = 271

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 67/277 (24%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLVERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +N    ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREV--LVSEANDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E     +                +  +   P V+ 
Sbjct: 136 ETEVEGQLLTIASCHLSWWDKGFQGEWAKLEA----------------ELLKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHTVAKEASGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|56807835|ref|ZP_00365677.1| COG3568: Metal-dependent hydrolase [Streptococcus pyogenes M49 591]
          Length = 260

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 74/280 (26%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF------------------- 92
                L ++      DI+ LQE+              +                      
Sbjct: 7   KKLVALAEHILAEKYDIICLQEINQLIESELATDLPRYQALSGTPSIHKDHFALLLIHYL 66

Query: 93  ---YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +     +A+  K       S  L+ A D  +    RR++   
Sbjct: 67  QKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPI--HVSDILVSAMDDETDYHTRRSLIAK 124

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             ++GK++ V+++HL  F                        +    +      P ++ G
Sbjct: 125 TTLDGKEVAVVNVHLSWFDKG----------------FLGEWEKLEKELLTLNCPLLLMG 168

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR---CNANKNLRNKIPI--DYFVMDQ 264
           DFN   +  G        +D  DS               + +    NK  +  D+    +
Sbjct: 169 DFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQDNKEALKVDHVFTSK 228

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +      + +F                +SDH  + +  D+
Sbjct: 229 DFIIRSSKITFE---------GGDAPVVSDHYGLEVTLDW 259


>gi|260947102|ref|XP_002617848.1| hypothetical protein CLUG_01307 [Clavispora lusitaniae ATCC 42720]
 gi|238847720|gb|EEQ37184.1| hypothetical protein CLUG_01307 [Clavispora lusitaniae ATCC 42720]
          Length = 396

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/336 (10%), Positives = 88/336 (26%), Gaps = 59/336 (17%)

Query: 23  KVRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76
            + ++++N+   + + ++    L +N +  T   + L+ Q       DI+  QE+     
Sbjct: 65  SISIMTFNLLSQHYVWKKVFGDLDQNYLDWTHYRFPLINQTISQFQCDIMCFQELECSVY 124

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQ---------- 125
            N+    FP   +   Y  +    +     +       + V  +   V+           
Sbjct: 125 ENSWKSNFPLKNYSSVYMRKPNPKYWGTKPSEFMDGVGVFVNSERFDVVDYYPINYGNYV 184

Query: 126 --QSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                      D  SR   R  V L+++  + +    + +      +     +       
Sbjct: 185 SEHPDRFDLTDDVVSRVIPRNTVALILKLWDKQAEKTVYVTNTHLYWSPKFNDVKLIQTK 244

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---------------------GNN 221
           +L  +   L       +E     ++ GD+N   N L                        
Sbjct: 245 ILLNELARLI-----GEEENPCIIMCGDYNSTPNSLVFKLLKDGKVKVDTAEEFADFDYG 299

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRC------------NANKNLRNKIPIDYFVMDQN-AYK 268
                    N+ +        +                + +      +D+          
Sbjct: 300 HKIDGEPLDNEFVKSPFDLTPAYGPLLKDGSPHKLDFTSYSKNLTEVLDHIWFSSATFEA 359

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +          +       +  SDH P+  +  +
Sbjct: 360 NRVLGKVEGDYSAQASGFPDRQFPSDHIPLVSEISY 395


>gi|85704128|ref|ZP_01035231.1| hypothetical protein ROS217_14056 [Roseovarius sp. 217]
 gi|85671448|gb|EAQ26306.1| hypothetical protein ROS217_14056 [Roseovarius sp. 217]
          Length = 348

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/352 (9%), Positives = 83/352 (23%), Gaps = 63/352 (17%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           ++        + ++ +RL SWN+  L       L ++ +  +      +      +  DI
Sbjct: 1   MLVLAFCTLPAHSETLRLASWNVK-LDRAGPGLLLRDILSGSDPQIEAVAGVLLVVRPDI 59

Query: 69  VFLQEMGSYNAVAKVF---------PKNTWCIFYSTERLINH-----------------S 102
           + LQ +     +  V              +   ++                        +
Sbjct: 60  LVLQGVDHDLDLLAVKALRDRIAQGGGPRYDHLFAPRPNSGMATALDMDGDGRRGGPRDA 119

Query: 103 KRDSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRAVELL--- 149
           +   +      +A+  +             +L +  P               A + +   
Sbjct: 120 QGYGDFAGQGGMALLSRYPVDQTEAQDFSTLLWRDLPGALLPVRDGLPFPSEAAQAVQRL 179

Query: 150 ---------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                    V +    + V+  H     F    +     +   +      L         
Sbjct: 180 SSNGHWIVPVMLASGPMLVMTFHATPPVFDGPEDLNGRRNHDEIRFW--QLYFDGVFGPP 237

Query: 201 SLVPFVIAGDFNRKINYLG-----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
               FV+ GD N             +D        +   +R     D+      +     
Sbjct: 238 PQGRFVLMGDANLDPEASDGQHQAIHDLLADPRLQDPRPMRPEPGPDAMRLHTVHWPPPG 297

Query: 256 ----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                + Y +  ++     +  +       +          S H  + +D  
Sbjct: 298 PGARRVSYILPSRDLN---VAGAGVHWPPEDTPEGDLAATASPHRLVWVDLS 346


>gi|299068294|emb|CBJ39515.1| putative exodeoxyribonuclease III/endonuclease/phosphatase
           [Ralstonia solanacearum CMR15]
          Length = 261

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 81/304 (26%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +        +               ++    DAD V +QE+         
Sbjct: 2   LRIISANLNGVRSAASKGFF---------------EWMGKQDADFVCVQELKCAQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +     +  +         A    +           ++G       A  R
Sbjct: 43  ---DMTPEFLAPHGYHSVFQHAVKKGYSGAGLYARHKP-----DDVIVGFDGGEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ ++ +++ S    +  +        L  Q    L+       E   
Sbjct: 95  Y-----VEARYGKLSIISVYVPSGSSGEERQQAKFRFMDLFMQHLTDLRH------EKGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N     +   +                +   +      +   +  D R    
Sbjct: 144 EVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWLTRLFDEVGYVDVFRTLDPRPEQY 203

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +            S             R  + SDH P++
Sbjct: 204 TWWSNRGQAYAKNVGWRIDYQIATPGIAATARSTSI-----------FRDIKFSDHAPLT 252

Query: 300 IDYD 303
           +DYD
Sbjct: 253 VDYD 256


>gi|239931772|ref|ZP_04688725.1| hypothetical protein SghaA1_26367 [Streptomyces ghanaensis ATCC
           14672]
 gi|291440141|ref|ZP_06579531.1| endonuclease/exonuclease/phosphatase [Streptomyces ghanaensis ATCC
           14672]
 gi|291343036|gb|EFE69992.1| endonuclease/exonuclease/phosphatase [Streptomyces ghanaensis ATCC
           14672]
          Length = 251

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 70/279 (25%), Gaps = 52/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+NI                     D   L +       D+V LQE   +    K 
Sbjct: 20  IRVLSYNIR----------------SMQDDTDALARVITACAPDLVLLQEAPRFFRWRKK 63

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +       S   L+  S   +        ++R    R      PL            R
Sbjct: 64  LAR-----LASASGLVVLSGGATAAGPALLCSLRATVERTEDVLLPLTPGLHR------R 112

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V   G ++ VL  HL                     +Q   L D +        
Sbjct: 113 GFATAVVRFGGARLGVLSCHLSLRQ-------------DERYEQGGMLLDRLAGMGVEHA 159

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V  GD N   N            D   +     +      + +K       ID   + 
Sbjct: 160 --VAGGDLNDGPNGRTFRRLAGNLTDCWAAAPWGGEHTWGPADPHK------RIDALFVT 211

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                        +    E D+    +  +DH P+    
Sbjct: 212 GGVEVLGCGVPHGQPGVTEADL----RAATDHLPVLAAL 246


>gi|329934913|ref|ZP_08284954.1| putative membrane protein [Streptomyces griseoaurantiacus M045]
 gi|329305735|gb|EGG49591.1| putative membrane protein [Streptomyces griseoaurantiacus M045]
          Length = 346

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 85/317 (26%), Gaps = 85/317 (26%)

Query: 3   RKYVLALVFFLVP---------------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47
           R+   AL+  LVP                 A     + + + N+N  +     +      
Sbjct: 93  RRSATALIALLVPLVVWVNLFGGLLSDKTAAGGEDDLTVATHNVNASNADPSGT------ 146

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                      +      AD++ LQE+       K     T+          +       
Sbjct: 147 ----------AREIAVAGADVLALQEL-------KASAVPTYERLLEPTYKYHAVVGTVG 189

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                           L   +P+ G +    R G +RA+   V      + V   HL S 
Sbjct: 190 ----------------LWSKFPMSGVRTVDIRLGWKRAMRATVTTPDGPLAVYVAHLPSV 233

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                ++     +     + A  L   I  +K+S    V+  D N  +N         + 
Sbjct: 234 R----VKLRAGFTARERDRSADALGAAIAHEKQS--RVVLLADANGTMND--------RA 279

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           +    S +R  +                   ID  ++       +   S   +       
Sbjct: 280 LTAVTSQMRSTQGAVGSGFGFSWPASFPMARIDQIMVKG-----VKPVSSWTLP------ 328

Query: 286 KSRGKRLSDHCPISIDY 302
               K  SDH PI+   
Sbjct: 329 ----KTGSDHLPIAARL 341


>gi|325981921|ref|YP_004294323.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212]
 gi|325531440|gb|ADZ26161.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212]
          Length = 257

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 73/270 (27%), Gaps = 61/270 (22%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           Q+     AD+V +QE+                    +    +     +    ++ + +  
Sbjct: 21  QWLAAQSADVVCVQELK--------AQLPDLSPAIQSPDGYHGYFHCAGQRGYSGVGIYT 72

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +           +   D+  R          ++ +   + ++ I+L S    +  +    
Sbjct: 73  RKKPDQVIEGIGIADIDAEGRF---------LQADFGNLSIISIYLPSGSSGEHRQAAK- 122

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNND 222
                     +     +   K S    ++ GD+N                         +
Sbjct: 123 ------FYFMEKFFPVLQNLKISNREIILCGDWNIAHKEIDLKNWRSNQKNSGFLPEERE 176

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273
                ++ +  +  F +      +      N+           IDY +      +   + 
Sbjct: 177 WLSNVLENSGFIDVFRRLNAEP-DQYTWWSNRGQAWAKNVGWRIDYQIATPAIAQLAQRV 235

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           S             + +R SDH P+ IDYD
Sbjct: 236 SI-----------YKDERFSDHAPLIIDYD 254


>gi|227834005|ref|YP_002835712.1| putative extracellular nuclease [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183507|ref|ZP_06042928.1| putative extracellular nuclease [Corynebacterium aurimucosum ATCC
           700975]
 gi|227455021|gb|ACP33774.1| putative extracellular nuclease [Corynebacterium aurimucosum ATCC
           700975]
          Length = 942

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 104/347 (29%), Gaps = 62/347 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLS--------------------EQEGVSLWKNSVKRTTSDY 54
           P    V     + ++N+                          +  +      +   +D 
Sbjct: 467 PEAPQVDGDYTVAAFNVLNFFINLGEDNGAKSYKDRFGNGVGSDSGTFRGAWSESAFNDQ 526

Query: 55  T-LLRQYAKNLDADIVFLQEMGS---------YNAVAKVFPKNTWCIFYSTERLINHSKR 104
              +    + LDAD++ L E+ +          +AV  +  +            +     
Sbjct: 527 KGKILTALEGLDADVIGLSEIENAANTVGGSYDDAVKYLVGELNSRAGSEKWDYVKAPAN 586

Query: 105 DSNN--DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--------NG 154
            S +   I TAI  +K  V+ + ++  L   +D+  +   R  +    +           
Sbjct: 587 ASADTDVIRTAIIYKKDRVKPVGEATLL---EDARFKGTARTPLAAEFQPVSDRCAAEGP 643

Query: 155 KKIWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAG 209
               V+  H KS   + + +         + ++ +  AQ + D + ++ +       + G
Sbjct: 644 DSFVVVTNHFKSKGSVANGDADTGDGQGNNPNVRNAHAQAVLDGLAKQPQWQEKATFVMG 703

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-----Q 264
           D N           F              +E      + +       +D+ + +     Q
Sbjct: 704 DLNAYSKEDAI-SVFRNAGYTIPVEELNAQEDWQDVASYQFSGRLGSLDHILANEHVDAQ 762

Query: 265 NAYKFLIQES------FSEILYNEDDIKSRG--KRLSDHCPISIDYD 303
            A  + I  +      +S   Y   D+       R SDH P+ + ++
Sbjct: 763 AAQTWNINSNEPIAMEYSRRNYTGGDVFEADNPYRSSDHDPVKVGFN 809


>gi|224534803|ref|ZP_03675375.1| exodeoxyribonuclease III [Borrelia spielmanii A14S]
 gi|224514051|gb|EEF84373.1| exodeoxyribonuclease III [Borrelia spielmanii A14S]
          Length = 255

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 81/303 (26%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ +    DI+ +QE  +    +  
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVREYTPDILCVQETKALREQLPS 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +            
Sbjct: 46  DLILENYYSYFSKSKIKGYSGVCIYSK---------------VKPIAVNLLGKEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +            +++ +  +                       ++++ +       
Sbjct: 91  RGLIA-----YYSDFVLINGYFPN-------SQALRRRLVYKLDFLSYVENLVDSFVNGG 138

Query: 203 VPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              VI GDFN                    Y+       + ++           K+    
Sbjct: 139 KNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETTWLDRFLNKGYVDTFRIFNKEPGYY 198

Query: 247 ANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
              + R +         IDYF++++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWSYRTRAREKNMGWRIDYFIVNEFFKRNVKKSLILDKV-----------MGSDHCPVC 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEL 250


>gi|257870899|ref|ZP_05650552.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2]
 gi|257805063|gb|EEV33885.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2]
          Length = 270

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 97/308 (31%), Gaps = 66/308 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++ N +  L +               +   ++ Q     D D++ LQE+    A   
Sbjct: 1   MKVLTLNTHSWLEDD------------QEAKLKVIAQEIAAGDYDLIALQEVNQSIAATT 48

Query: 83  VFPKNTW----------------------CIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
           + P   +                       I                +  H   A+  KN
Sbjct: 49  IVPDGLYCPTEAILEIKEDNFALRLVEELQILDHDYYWSWTYSHVGYDVYHEGNALLSKN 108

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             + ++   L            R+ +  L E++GK I VL  H   +             
Sbjct: 109 PIIAKE--YLASETTDVWDHTTRKNLSGLTEVDGKMIQVLSCHFSWWNDG---------- 156

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
               + + Q  + ++T++  S    ++ GDFN + + LG       ++   DS +   K 
Sbjct: 157 --KFAYEWQQTEAFLTERAAS---LLLLGDFNNEADSLGYQLVKNSSLQLQDSFLAATKT 211

Query: 241 KDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     +  ++ +  + IDY    QN            + Y       R   +SDH
Sbjct: 212 IGEASVVKAIDGWQDNQTALRIDYVFASQN---------EQPVEYEVVFDGQRLPIVSDH 262

Query: 296 CPISIDYD 303
             I + ++
Sbjct: 263 FGICVVFE 270


>gi|308162466|gb|EFO64862.1| Endonuclease/Exonuclease/phosphatase [Giardia lamblia P15]
          Length = 322

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 70/275 (25%), Gaps = 39/275 (14%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI---FYSTERLINHSKRDSNNDIHTA 113
           L+ +    D DIV   E    ++    F +    +         +  +      +     
Sbjct: 57  LKDFIYRKDPDIVCFSETKLGSSAFAAFMEKEATVDPDTGVYTVIKGYKHVFCCSTAKQG 116

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            A     V+       L             R + + +  + + I V   +        + 
Sbjct: 117 YASTAMFVKESVPVLNLCMQMGEPEFDSEGRFLHVSL-PSFELIHVYVPNSGRGSNGKTF 175

Query: 174 ENTYSPS-CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------------- 217
            +   P+         + +  +I     +    V  GD N   N                
Sbjct: 176 TSKNKPANLPTRINYEKLISKYIGNLVAAGKDVVYCGDLNVAHNEIDLYNPKGNHFNPGF 235

Query: 218 -LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--------IPIDYFVMDQNAYK 268
                + F K +D +  +  F      R   +                IDYFV+    ++
Sbjct: 236 TDEERNAFSKLLDGHGLIDAFRAMHPHRVKYSWFSNFGRAREQKHGWRIDYFVVTHQIFR 295

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +             D+       SDH PI +   
Sbjct: 296 RVT----------TVDVLDDHNSYSDHVPIIMTLT 320


>gi|124006037|ref|ZP_01690874.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
           ATCC 23134]
 gi|123988444|gb|EAY28090.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
           ATCC 23134]
          Length = 584

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 76/302 (25%), Gaps = 51/302 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    + +VS+N+  L      +    + KR               + ++V  QE     
Sbjct: 181 ANPHTLNVVSYNLYGLFAGSICNRHAFAAKRLQ-------------NFEVVGFQEAFDNE 227

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++        + +T+        +          +  +   + Q             
Sbjct: 228 CRQQLKNNLQASGWSTTKVTDASGFPEDG-----GSFIASRYPIIAQDQVVFSSNNSCNF 282

Query: 139 RAGN----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              N    +      +  +G    V + HL +                +   Q   +K +
Sbjct: 283 TQANLFAAKGINYAKINKHGVMYHVFNTHLYAGSTNTCQ--------EVRRDQLTVMKAF 334

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +K       ++ GDFN   +   +   F +   P                      +K
Sbjct: 335 VLRKTGGKGRIIMLGDFNIGEDKQNDLRTFLQAFIPAREGPMPYTIGAENVYG----GDK 390

Query: 255 IPIDYFVM----DQNAYKFLIQESFSEILYNEDDIKSRGKR-------------LSDHCP 297
             +DY +     +    +     +  +  +                        LSDH P
Sbjct: 391 QKLDYALFWDYTNAADAQLYEPVTHFQRTFCPRATMVNNANQGENTEWRDVFADLSDHYP 450

Query: 298 IS 299
           + 
Sbjct: 451 VY 452


>gi|255071615|ref|XP_002499482.1| predicted protein [Micromonas sp. RCC299]
 gi|226514744|gb|ACO60740.1| predicted protein [Micromonas sp. RCC299]
          Length = 539

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 95/327 (29%), Gaps = 61/327 (18%)

Query: 7   LALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           L ++  L+     + + +   RL+++N+   +E   +                L      
Sbjct: 240 LGILDALLAGNEPIKEPLSQVRLLTYNV-WFAEHVALV----------DRIDGLTDIVMR 288

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            D  ++ LQE+            N   + ++     ++         +  I + K+++  
Sbjct: 289 EDPHVICLQEVTH----------NILMLLHAQPWFEDYKGSPPPQQQYYTIIMFKRSMNK 338

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
              S   +  +D  +    R AV        +GK++ V   HL+SF            S 
Sbjct: 339 PDGSTR-VSRRDFMTSDMGRYAVGFCGMNCGDGKELTVFTSHLESFIS------KERTSS 391

Query: 182 SLLSQQAQWLKDWITQKKE---------SLVPFVIAGDFNRKINYLG----NNDDFWKTI 228
               +Q +     I    E         +    +  GD N      G            +
Sbjct: 392 DERVRQMKDALRVIDAVTERRANEYPGTATRNGIFMGDTNWDETTDGDVPLPEGWRDAWL 451

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN----------AYKFLIQESFSEI 278
              D    F  +          L+    +D  +   +            + + ++  S +
Sbjct: 452 THGDGTEGFTYDLRKNPMMGGWLQK--RLDRVLYRLSDFEVTGIKMVGTEPIKRKDGSVV 509

Query: 279 LYNEDDIKSRGKR---LSDHCPISIDY 302
            Y  +    R  +    SDH  + +  
Sbjct: 510 TYVNEYRGRRETKPVLPSDHFGLMVTL 536


>gi|68487904|ref|XP_712169.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans
           SC5314]
 gi|46433540|gb|EAK92976.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans
           SC5314]
          Length = 438

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 89/325 (27%), Gaps = 63/325 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-----LDADIVF 70
            +    Q ++L+++N   L         K   K        +     N      D DIV 
Sbjct: 12  ASEPKKQYIKLLTFNTWGL---------KFISKHRKERLRAIADALANPKSPDEDYDIVA 62

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--QSY 128
           LQE+              +       R        +       +AV  K          +
Sbjct: 63  LQEIWCEEDWQ-------YLDLVCRPRYPYRRVFKAGIVSGPGLAVLSKIFIAETFLYRF 115

Query: 129 PLLGAKDSFSRAGNRRAVELLVE------INGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           P+ G   +F R        + V        +   I +L+ H+ +         +   +C 
Sbjct: 116 PINGRPSAFFRGDFYVGKSIAVTMFQPHHPDILPIALLNSHMHAPYGSGDASYSTHRAC- 174

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSL 234
               QA      +   K++    +  GD N K + L            D W  ++ ++ +
Sbjct: 175 ----QAWDFAKLVRMLKKAGYAVIQVGDLNSKPDSLPYKLFTVEGGLTDSWNVLNKDNVV 230

Query: 235 IRFPKEKDS------------RCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSE 277
                   S                N    ++       +DY ++D      +   S   
Sbjct: 231 PNDQIATLSLEDQISLAGVTCNSRLNTWRESRPLWEACRLDYALID---ASNITPVSAQV 287

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
             + +          SDH   S+D 
Sbjct: 288 K-FVDKLPPPLSCSYSDHFAYSVDL 311


>gi|332261099|ref|XP_003279613.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Nomascus
           leucogenys]
          Length = 557

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 91/351 (25%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADIV LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLIQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKESIEMPSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV-------PFVIAGDFNRKINY--------- 217
            +       +   + + + D  ++  +S V       P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRNLKSNVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKI 255
               N+ DF +              K+                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 489 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 539


>gi|145548597|ref|XP_001459979.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427806|emb|CAK92582.1| unnamed protein product [Paramecium tetraurelia]
          Length = 280

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 85/291 (29%), Gaps = 59/291 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +++  +++N+                         + +  +  + D V LQE+     + 
Sbjct: 39  KQISFLTYNVWF------------EKHNFNERVIEILKIIQQNNCDFVCLQEVTRDFQIM 86

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               K     ++                  T   ++   + +L +  P    +  F+   
Sbjct: 87  MSNDKFIQSTYF-----------------ITGNVIKGYGILILSKFKPTFIIELPFNSQF 129

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  + L  +ING  + V   HL+S  +          +      Q Q     + + K  
Sbjct: 130 GRTFLYLECQINGHSLVVGTSHLESMVY----------NEQARYDQLQTTYKELEKYKN- 178

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               +I GDFN +           ++I P  + +      D+          K   D  +
Sbjct: 179 ---VIIMGDFNLETQKDE------QSISPQYADLWKQLYPDNPGYTFIIDDFKRRFDRIL 229

Query: 262 MDQNAYKFLIQESFSEILYNE--------DDIKSRGKRLSDHCPISIDYDF 304
           + +         +   +   E          +K   K  SDH  + +   +
Sbjct: 230 LKKGGS--YQASNIEILGTKEIPLYKDNKPSMKGEVKTPSDHYALKLHLQY 278


>gi|84684867|ref|ZP_01012767.1| metal-dependent hydrolase [Maritimibacter alkaliphilus HTCC2654]
 gi|84667202|gb|EAQ13672.1| metal-dependent hydrolase [Rhodobacterales bacterium HTCC2654]
          Length = 242

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 78/279 (27%), Gaps = 60/279 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NAVAK 82
           ++L S+NI            K   +    D   + +   +L AD+V LQE          
Sbjct: 1   MKLASYNIR-----------KAVGRDRRRDPGRVIEVINSLAADVVVLQEADRRLGQRPT 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P+               +   S      A+ VR+       + + L            
Sbjct: 50  ALPRRMIEDHTDLIPAPLATNDVSLGWHGNAVLVRRGLAVTGVERFDLPSL-------EP 102

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV + +E    +  V   HL                     QQ + L   +  +  + 
Sbjct: 103 RGAVAVEIE---GRFRVTGAHLALM-------------RRYRHQQLRELHRVLGDQALAT 146

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              V+ GDFN            W   +  + L R          +   +R    +D F  
Sbjct: 147 ---VVMGDFNE-----------WSLRNGMEELSRGFHLHAPGA-SYPTMRPVAHLDRFAF 191

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +           E+  +        +  SDH P+  +
Sbjct: 192 SHDL----------ELTGSGVHATELARIASDHLPVWAE 220


>gi|319407882|emb|CBI81534.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 292

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 73/281 (25%), Gaps = 51/281 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + S+N++     + +                + +    L ADI+ LQE         
Sbjct: 47  DLVVASYNVHKCVGVDKIFNPT-----------RIVRVIAELQADILALQEADKRFGERI 95

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    +  +    +       A+  +  +V          + S      
Sbjct: 96  GLIDLKLLKAETNLIPVPLNTMSPHGHGWHGNALFVRQGKVHD------ILQISLPGIEP 149

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+   +E+    I ++  H                     +QQ + L   +   K S 
Sbjct: 150 RGAIMAELEMETGFIRIIAAHFGLLRHS-------------RNQQVKMLLALLQ--KRSF 194

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GDFN         +         +    +         +  +    + +D    
Sbjct: 195 MPTLLIGDFN---------EWRVGKKSSLNHFFPYFDITRGTVPSFPSRFPFLALDRIFA 245

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   I+                 +  SDH PI    +
Sbjct: 246 FPPHLVTKIES----------HYSPLARVASDHLPIKAHLN 276


>gi|294646775|ref|ZP_06724398.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
 gi|292637935|gb|EFF56330.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
          Length = 213

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 61/209 (29%), Gaps = 52/209 (24%)

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           +AV  +     +       +K+          +   +EING+ I + + HL++     + 
Sbjct: 32  LAVFSRYPIKEEHLIIYPDSKNCS--------LACDIEINGRTIRLFNNHLQTTEVSQNK 83

Query: 174 ENTYS----------------------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
                                       +    + QA  LK  I     S  P ++ GDF
Sbjct: 84  RKLEKGLRTDDSQRVEHATLGLIDGLHENFRKRAVQADLLKQLI---AASPYPTLVCGDF 140

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N   +    +     TI  +     F           K  ++ + IDY +          
Sbjct: 141 NSLPSSYVYH-----TIKGDKLQDGFQTSGHGYMYTFKYFKHLLRIDYILHSPEL----- 190

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISI 300
                    N  D  S     SDH P+ +
Sbjct: 191 ---------NSTDYFSPDLNYSDHNPVVM 210


>gi|167646152|ref|YP_001683815.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
 gi|167348582|gb|ABZ71317.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
          Length = 324

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/295 (9%), Positives = 65/295 (22%), Gaps = 62/295 (21%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           L+        +    ++LV +N+   +                 D      + +   AD+
Sbjct: 91  LLAAGRRPAGAPTPTLKLVQFNVWAENH----------------DPAATLDWIRAQKADV 134

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           V L+E              +W I         ++        +    +  +   V  + +
Sbjct: 135 VLLEEG----------GGASWRIVKGLRATYPYAISCDG-KRYCDTWIFSRFPIVQHRGF 183

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                   +            +   G    V   H                       Q+
Sbjct: 184 --------YQDHLPLAGAWATLRHPGGNFTVAATHFVWPIPAG-----------RQQAQS 224

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + L   +          ++ GDFN                    +               
Sbjct: 225 RLLVAELKPFPRDS--LIVTGDFNSTPWSWSLRRQDKALGLERRTRALASWPTGDFSRVA 282

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +     +PID+    +               +    ++      SDH P+ +   
Sbjct: 283 RAPFPILPIDHVYAGKA--------------WTTVSVERGPSLGSDHRPVVVTLS 323


>gi|149689206|gb|ABR27973.1| salivary inositol polyphosphate 5-phosphatase [Triatoma infestans]
          Length = 318

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 96/344 (27%), Gaps = 70/344 (20%)

Query: 1   MIRKYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M  K +L   F  +    S A     + V +V+WN+            K+          
Sbjct: 1   MNLKILLLFSFASLYAKYSKAAEDNPRSVYVVTWNV----------AEKDPPGSVKELLG 50

Query: 56  LLRQYAKNLDADI--VFLQEMGSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIH 111
            +      ++ DI  + LQE+      A V    K+ W   ++      ++     ++  
Sbjct: 51  QVSDS-SEVNPDIVIIGLQELTMNPVQAVVNNIFKDKWSDDFNEILKSRNNYHKVYSESL 109

Query: 112 TAIAVRKKNVR-----VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
             I ++          + +++            +GN+ AV L  ++N +   +++ HL +
Sbjct: 110 LGILLKGIVKIKYKDSINKKADATTVKTGLGGMSGNKGAVILKFQLNNRWFCIVNSHLAA 169

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----- 221
               D            ++         +    +        GD N ++     +     
Sbjct: 170 ---HDEKLQERIEDYKTIN------NKRVDFCNKPSDFIFWLGDLNFRLQEDVEDEKIRN 220

Query: 222 ----------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                                  + +   +  +       + +         R     D 
Sbjct: 221 WVQQRKYADLLKLDQLKINKQTKEIFTDFNEKEITFAPTFKLEKGTGTYSTKRRPAWTDR 280

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +   +  K +    +  I            + SDH P+   +D
Sbjct: 281 ILYKSDTKKNITPTLYKSI---------ESYKHSDHYPVQAQFD 315


>gi|28493652|ref|NP_787813.1| exodeoxyribonuclease [Tropheryma whipplei str. Twist]
 gi|28572845|ref|NP_789625.1| exodeoxyribonuclease [Tropheryma whipplei TW08/27]
 gi|28410978|emb|CAD67363.1| putative exodeoxyribonuclease [Tropheryma whipplei TW08/27]
 gi|28476694|gb|AAO44782.1| putative exodeoxyribonuclease [Tropheryma whipplei str. Twist]
          Length = 281

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 80/281 (28%), Gaps = 58/281 (20%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           + K  + DI+ +QE+ +  +  +      W I +    +   +     +     IAVR K
Sbjct: 23  WLKERNPDILTIQEVRAQESDLRGI-LPNWNISFDPCSIPGRAGVAIASK-FPPIAVRTK 80

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                 +      A +       R  +E   +I GK + V+  ++ +       +     
Sbjct: 81  L--RANKILNPETASEEPLNTSGRW-IEADYDIAGKLVTVVSCYVYAGEARTIKQEEKMA 137

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------------F 224
               + ++ + L              ++ GDFN     L   +                +
Sbjct: 138 FLQAVEKRMKSLVK--------EEFALVTGDFNVGHTTLDIKNWRGNLDKSGFLPEERAY 189

Query: 225 WKTIDPNDSLIRFPKEKDSRC------------NANKNLRNK---------IPIDYFVMD 263
              +  N+S   +                            +           IDY    
Sbjct: 190 LDALVGNESDKEYNAGAGQGWIDVVRKIKGGIDGPYTWWSMRGNAFDNDTGWRIDYQFAT 249

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Q      +           D  KS  +R +DH P+ + YDF
Sbjct: 250 QRLKALWVA---------IDRQKSYAQRWTDHAPVVVKYDF 281


>gi|148697886|gb|EDL29833.1| deoxyribonuclease 1-like 1, isoform CRA_a [Mus musculus]
          Length = 288

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 75/303 (24%), Gaps = 59/303 (19%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  V+A +  L+       +  R+ ++N + L+          +     S    L Q  
Sbjct: 19  MRGLVMAPLLILLVGGT---EAFRICAFNAHRLTL---------AKLTKESVMDTLVQIL 66

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI+ LQE+   +                                +T   + +K  
Sbjct: 67  ARC--DIMVLQEVVDSS-------------------------------QNTVPFLLQKLK 93

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPS 180
           R  +         +       R        +  K +  V+ + L +       E      
Sbjct: 94  RSDKTQVLNFYQYNDTDDIFAREPFVAHFTLPSKTLPSVVLVPLHTTPKDVEKELNALYD 153

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             L   Q                  ++ GDFN     L         +           +
Sbjct: 154 VFLDVYQRWQ-----------NENVILLGDFNADCASLTKKRLKSLLLRTKAGFHWVIPD 202

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +              I   V  Q     L   +  +        +    R+SDH P+ +
Sbjct: 203 GEDTTVRASTNCTYDRI--VVHGQGCQMLLKAAATFDFPKRFQLTEEEALRISDHYPVEV 260

Query: 301 DYD 303
           +  
Sbjct: 261 ELS 263


>gi|148556564|ref|YP_001264146.1| hypothetical protein Swit_3662 [Sphingomonas wittichii RW1]
 gi|148501754|gb|ABQ70008.1| hypothetical protein Swit_3662 [Sphingomonas wittichii RW1]
          Length = 351

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 96/301 (31%), Gaps = 31/301 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++++NI  L             +        LR+  + +  D+V  QEM S  A  +
Sbjct: 51  TLSVLTYNIEGLGWPARKGRVTQLREIGR-RLAGLRE--QGIAPDVVMFQEMFSGGA-KR 106

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNN------------------DIHTAIAVRKKNVRVL 124
               + +    +  + +  + R ++                       AIA R     V 
Sbjct: 107 AVAASGYPAIVAGPQRLTFAGRATDRPLPGHSRFRRGELGLKLLGSGLAIAARYPLDGVE 166

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
              Y L           N+  V  L+ + G  + +            S       + +  
Sbjct: 167 LHPYGLRSCAGI-DCLANKGIVRALLHMPGVPVPIELYDTHMNSQGASRAPK-PRALAAH 224

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            +Q++    +I    E   P +  GDFN +  +       +    P + + R+  E D  
Sbjct: 225 MRQSREASGFIAGVNEPAYPLIFGGDFNMR--WSEERFADFSLYVPLEIVHRWCIEPDHG 282

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDY 302
           C+   +     P   ++  Q+   F    + +      + +   G   +LSDH    + Y
Sbjct: 283 CDVRMSWDGDEP---WMDTQDLQLFRSSPTVAIRPIRVEAMFDGGALPQLSDHDGFLVTY 339

Query: 303 D 303
           +
Sbjct: 340 E 340


>gi|307111810|gb|EFN60044.1| hypothetical protein CHLNCDRAFT_133272 [Chlorella variabilis]
          Length = 482

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 79/306 (25%), Gaps = 44/306 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVK----RTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           ++R+++ N   L         + +      R  +   L+        AD++ LQE+    
Sbjct: 2   ELRVITLNAWGLWVVAKRRQERVAALAQFLRRQASVHLIDSCLAACTADVMLLQEVWVAA 61

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF- 137
            V  +          + E  + HS       I + + +  +         P     D F 
Sbjct: 62  DVELLRQA-------AAEGGLPHSFHFLCGAIGSGLLLLSRFRIAQVAFQPYTARGDPFA 114

Query: 138 ----SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY---------SPSCS-L 183
                    +      ++     I V + HL +                      S + +
Sbjct: 115 VLNGDYFAGKGVGWAALDTPAGTISVFNTHLSANYGQRWQTGARGLPPHCRLPRDSLAGV 174

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
              Q   L  ++          V+AGD N   + L             D+       +  
Sbjct: 175 RLLQVLELAAFVRSHGRGSAATVLAGDLNAAPDTLELALLKALLPHLRDAWAEAQPLRLG 234

Query: 244 RC-----NANKNLR---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                  N+            IDY +            S    L +     S     SDH
Sbjct: 235 ATANALENSFTTAGAGHTPSRIDYVLST------CAAVSAELALADTGLGFSY----SDH 284

Query: 296 CPISID 301
             ++  
Sbjct: 285 VGVAAT 290


>gi|301062581|ref|ZP_07203216.1| exodeoxyribonuclease III [delta proteobacterium NaphS2]
 gi|300443317|gb|EFK07447.1| exodeoxyribonuclease III [delta proteobacterium NaphS2]
          Length = 256

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/296 (10%), Positives = 73/296 (24%), Gaps = 73/296 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++  ++N N+L                 +   +L  + +  + D++ +QE    +     
Sbjct: 1   MKFATFNANSL----------------RARLPILLDWLEREEPDVLCIQETKVQD----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +         +  +A+  K+     +        +        
Sbjct: 40  -----KDFPVKPFEGAGYHAAFKGQKSYNGVAIVSKSPLEAPRLNLFDEGDEQARFISGI 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V +                ++       +          + L D I  + +   
Sbjct: 95  IGGIPIVNV----------------YVPQGFQVGTEKFQYKLGWLKSLYDHIAGRYDPDA 138

Query: 204 PFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCNANK 249
           P ++AGDFN  ++     D                   +     L+   ++  S      
Sbjct: 139 PLLVAGDFNVALDDRDVYDPDGFRDGVGFHPEEQALMKMFFQWGLVDIFRQHVSEPQQYT 198

Query: 250 NLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
               +            IDY +  +   +              D+     K+ SDH
Sbjct: 199 FWDYRIPNGFKRNMGWRIDYILGTKPLTEKSTAIWI-------DNQSRGLKKPSDH 247


>gi|165874707|gb|ABY68236.1| DNA lyase [Beauveria caledonica]
          Length = 559

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 70/298 (23%), Gaps = 69/298 (23%)

Query: 64  LDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKN 120
           L+ADIV +QE  +   +    +     W  ++S  ++   +S         T   +R + 
Sbjct: 1   LEADIVIMQETKIQRKDLQDDMVLVPGWDAYFSLPQQKKGYSGVAIYTRNATCAPIRAEE 60

Query: 121 -------VRVLQQSYPLLGAKDSFSRAGN----RRAVELLVEINGKKIWVLDIHLKSFCF 169
                         Y  L               R  V+  +  +     VL+        
Sbjct: 61  GILGILCPPKSNTPYRDLPGDQQIGGYPTLSQLRGNVDDALLDSEGSCVVLEFPSFVLLG 120

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------------- 212
           + S  N             + L   I     +    ++AGD N                 
Sbjct: 121 VYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVIVAGDLNIIRNEMDSSNIAESLQK 180

Query: 213 -----RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSRCNANK 249
                 +   +       + +     +                      +     C   K
Sbjct: 181 EGISMDEWQSMPTRRILNQLLFEGTVVGDRDDDRERAVLWDICRCFHPTRLGMHTCWDAK 240

Query: 250 NLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      IDY +       + ++ +              G   SDHCP+     
Sbjct: 241 RKTRPANVGSRIDYILCSDGLKSWFVESNIQ-----------EGLMGSDHCPVYATMS 287


>gi|326915191|ref|XP_003203903.1| PREDICTED: LOW QUALITY PROTEIN: protein angel homolog 2-like
           [Meleagris gallopavo]
          Length = 553

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 56/210 (26%), Gaps = 24/210 (11%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  +   T  +  + Q  K LDAD++ LQE+   +
Sbjct: 173 DFTVMSYNILSQNLLEDNSHLYKHCRQRLLIWTYRFPNILQEIKQLDADVLCLQEVQEDH 232

Query: 79  AVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              ++        +   Y                      +    V   ++  PLL   +
Sbjct: 233 YRKEIKSSLESLGYHCEYKMRTGSKPDGCAICFKTSKFRLISSNPVEFFRRDIPLLDRDN 292

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                     + L  +   K    + I      +             +   Q   L   I
Sbjct: 293 VG------LVLLLQPKFPCKTNAAICIANTHLLYNP-------RRGDIKLTQLAMLLAEI 339

Query: 196 TQKKESLV----PFVIAGDFNRKINYLGNN 221
                       P +I GDFN         
Sbjct: 340 ASVAPQKNGIFCPIIICGDFNSVPGSPLYR 369


>gi|162449652|ref|YP_001612019.1| putative nuclease [Sorangium cellulosum 'So ce 56']
 gi|161160234|emb|CAN91539.1| putative nuclease [Sorangium cellulosum 'So ce 56']
          Length = 257

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 77/302 (25%), Gaps = 70/302 (23%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++NI                      +  +         D++ LQE   +   A++   
Sbjct: 1   MTFNILFGG---------------EDRFEAILAIVAAARPDLLVLQECVGWEDGARLRAV 45

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                  + ER       +   +         +N   +    PL GA+     A     V
Sbjct: 46  AEAIGAPAGERHAVLGNANPRPNGR-------RNHVAVVSRAPLAGARVHAPEALAHCLV 98

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
           E+ + + G+ + VL  HL +                    +A+WL   +   + +   + 
Sbjct: 99  EVELSLGGEPLVVLGTHLNAGSED------------RRLTEARWLLSLVPPTRFAAGLWA 146

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI--------- 257
           +AGD N          D    +            +    ++ +       +         
Sbjct: 147 LAGDLNALSRRDPYPADLGARLAAAGIEKYGSPPRFDTMDSIEAFGWADALLLRPRTSRW 206

Query: 258 ----------------DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                           DY ++       L      ++              SDH  +  +
Sbjct: 207 FTALRGRDGAQVETRTDYVLLSPRLAGRLALADVIDVGA-----------ASDHHAVIAE 255

Query: 302 YD 303
             
Sbjct: 256 LS 257


>gi|84625324|ref|YP_452696.1| hypothetical protein XOO_3667 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84369264|dbj|BAE70422.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 245

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 78/286 (27%), Gaps = 60/286 (20%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++ NI   S     S +               +    +         DIV LQE    + 
Sbjct: 2   LTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAALVGER--DIVGLQEADPGSL 59

Query: 80  VAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +    +  +    +     +H   R       +A  +  K   +  Q + L G      
Sbjct: 60  RSGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPLEVQDHALPG------ 113

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R G R  +          + V   HL                 +    Q  ++ + ++  
Sbjct: 114 RIGGRGILLAKFGEGRDGLAVAVAHLSLG-------------ANSRMAQLAFIAELLSDH 160

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NANKNLRNKIP 256
             +    ++ GDFN   +                 L R  + +   C  +   + R    
Sbjct: 161 PNA----MLMGDFNCMADRPEMQS-----------LYRHTRLQPPSCEVHTFPSWRPDRA 205

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID+ ++  +                 +  ++     SDH  + +D 
Sbjct: 206 IDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDI 237


>gi|308504709|ref|XP_003114538.1| hypothetical protein CRE_27203 [Caenorhabditis remanei]
 gi|308261923|gb|EFP05876.1| hypothetical protein CRE_27203 [Caenorhabditis remanei]
          Length = 317

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 92/344 (26%), Gaps = 68/344 (19%)

Query: 1   MIRKYVLALVFFLVPCTASV--------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
           M+  ++L +   ++  T+S            +RL+++NI              S     +
Sbjct: 1   MM--FLLFIFLSILSFTSSSYSSYYTTSQNGIRLMTFNIW------------QSGANVEN 46

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
               + ++   ++ D+V LQE+ +                       +       N  + 
Sbjct: 47  GQQKIAKHILMVNPDVVALQEVYANVTRNLTLML------------GHPWVAVDRNHEYP 94

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
             A+  ++V V   +  L  +    ++   R    +              +  +   ++ 
Sbjct: 95  DTAILTRHVVVPNTN--LSTSGGVGAKIMLRTGYMIHFWSLHLDYTSYGPYAANNKLVNK 152

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFNRKINYL---------- 218
           L+   +        Q   + D    K    K   +P  IAGDFN   +            
Sbjct: 153 LDQIMAGENVGRGPQIYEVLDLPMMKKWIEKSDEIPIFIAGDFNGPSHLDWTEQTKKIHG 212

Query: 219 ------------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                                 + +  +  N  +      K +          +  ID+ 
Sbjct: 213 DWVVRWPATKELEERKFTDTFREIYPNVVTNPGITWSTVNKFNPEWNYTIPEPQDRIDFL 272

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   + I               +     SDH  +  DY F
Sbjct: 273 FYRGPVVPYQILTYSGCEKPQRIPFHAHNDYPSDHFSVFADYTF 316


>gi|308504898|ref|XP_003114632.1| hypothetical protein CRE_28560 [Caenorhabditis remanei]
 gi|308258814|gb|EFP02767.1| hypothetical protein CRE_28560 [Caenorhabditis remanei]
          Length = 351

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 87/284 (30%), Gaps = 44/284 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ ++SWNI+ L  +   +               + Q  K+++ DI+FLQE+   +    
Sbjct: 107 EINVMSWNIDGLDGRSLAT-----------RMKAVAQIVKSVNPDILFLQEVVDRDLGPI 155

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              ++ + I+YS                +TAI V  K   V +           +     
Sbjct: 156 DKLQSLYKIYYSNRGC----------QYYTAILV-SKMFEVEKHDVIHFQNSGMY----- 199

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    +   I G K+++L+ HL+S              C+  S      ++ + Q     
Sbjct: 200 RTLQIVEGSIGGIKVFLLNTHLESTREH------RGQRCAQFSFCMDKCEEILAQ--NPG 251

Query: 203 VPFVIAGDFN--RKINYLGNNDDFWKTIDPNDSLIR-FPKEKDSRCNANKNLRNKIPIDY 259
                 GD N   +      N      +         F  +     N       K+  D 
Sbjct: 252 CFLFFGGDLNLRDEEVSRIPNGILDAWVSAGSDTKTKFTWDTYRNDNKQGFYNAKMRFDR 311

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   K        +       I+S     SDH  IS  + 
Sbjct: 312 LYWHGPLNKVQFSLEGRQ------RIRSCLCFPSDHWAISATFS 349


>gi|238061236|ref|ZP_04605945.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
 gi|237883047|gb|EEP71875.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
          Length = 1091

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/387 (8%), Positives = 82/387 (21%), Gaps = 105/387 (27%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLW--------------------KNSVKRTTSDY 54
           P  A  ++++ + ++N+  L +                             S        
Sbjct: 598 PQPADRSREIAVATYNVENLYDHRDDPFDGCDFTGNAGCTGVSPPFDYVPASEADYREHL 657

Query: 55  TLLRQYAKN--LDADIVFLQEMGS----------------------YNAVAKVFPKNTWC 90
           T L    +      D++ +QE                          + + ++       
Sbjct: 658 TSLADQIRTDLHAPDLILVQEAEDQDICSVSGGALVCGETNDADGAPDTLQELTLAVAAA 717

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL------------------- 131
              +     + +       I      R   + + + +                       
Sbjct: 718 GGPAYAAAYDRTG-ADARGITAGFLYRTDRLSLAEATATDPLLGSAPVVPYRSEGLPSNA 776

Query: 132 ----------------------GAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFC 168
                                    + ++RA       +     G +   +  +      
Sbjct: 777 DVQNPKALNAVLPADTDTSTGKDGNNVYTRAPQLGRFWVRATPGGSEGYHLWALSNHFSS 836

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------NYLG 219
             DS     +      +     + +      +     V  GD N                
Sbjct: 837 GPDSRVGQRTEQARYGAALVTAIHN-----ADRNSRVVYGGDLNVFPRPDDPIATGADPT 891

Query: 220 NNDDFWKTIDP--NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
            +D      D   +        +  S   +         +D+  ++      L+Q   + 
Sbjct: 892 PSDQLAALYDAGLHSLWDDLVADVPSSAYSYSFQGQAQTLDHLFVNDALRDELVQVRAAH 951

Query: 278 ILYN--EDDIKSRGKRLSDHCPISIDY 302
           +  +   +      +  SDH P    +
Sbjct: 952 VNADWPAEFTGDGSRGSSDHDPQVARF 978


>gi|166215964|sp|A2BHJ4|CNO6L_DANRE RecName: Full=CCR4-NOT transcription complex subunit 6-like
 gi|123230008|emb|CAM16193.1| novel protein similar to vertebrate (CCR4-NOT transcription
           complex, subunit 6-like) (CNOT6L) (zgc:111987) [Danio
           rerio]
          Length = 559

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/350 (9%), Positives = 88/350 (25%), Gaps = 69/350 (19%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78
             ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +     
Sbjct: 184 FTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEITNCDADIISLQEVETEQYYT 243

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              +      +  F+  +                  +  + +   ++Q+           
Sbjct: 244 FFLETLKDRGYDGFFCPKSRAKLVSEQERKHVDGCGVFFKTEKFALVQKHTVEFNQVAMA 303

Query: 138 SRAGNRRAVELLVEINGKKIWV---------------------LDIHLKSFCFLDSLENT 176
           +  G+   +  ++  +   + V                     L +      +     + 
Sbjct: 304 NSEGSEVMLNRVMTKDNIGVAVLLEVKKDLFATGLKPPPEKQLLLVANAHMHWDPEYSDV 363

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLV--------PFVIAGDFNRKINY----------- 217
                 +   + + + +  +    S          P V+  D N   +            
Sbjct: 364 KLIQTMMFLSELKSIAERASGSINSSSPTSETSSIPIVLCADLNSLPDSGVVEYLSNGGV 423

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSR--------------------CNANKNLRNKIPI 257
             N+ DF +    +         K+ +                       N     K  I
Sbjct: 424 AENHKDFKELRYSDCLTNFSCNGKNGKPDGSITHSFQLKSAYEGNLMPYTNYTYDFKGVI 483

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK---SRGKRLSDHCPISIDYDF 304
           DY    +     L      E  + +D+           SDH  +    ++
Sbjct: 484 DYIFFSKTHMSVLGVLGPLETQWLKDNNITGCPHPHIPSDHFSLLAQLEY 533


>gi|330468104|ref|YP_004405847.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328811075|gb|AEB45247.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 260

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 82/309 (26%), Gaps = 80/309 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79
           +RL ++N+          +          D   L      LDAD++ LQE+    +    
Sbjct: 1   MRLATFNLLHGRSLTDGLV----------DPHRLAAAVTALDADVLALQEVDRDQSRSGN 50

Query: 80  ------VAKVFPKNTWCIFYSTERLINHSKR------DSNNDIHTAIAVRKKNVRVLQQS 127
                  A+    +      +       + R      D + +    + +  ++     Q 
Sbjct: 51  LDLTAIAAQALHADEHRFAAAVVGTPGEAFRPLTHDDDGHGEPCYGVGLISRHPVTTWQV 110

Query: 128 YPLLGAK--------------DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             L  A                   R   R  +  +++     + V   HL      +  
Sbjct: 111 TRLKPAPVRSPVYAPGAGGGGLILLRDEPRVVLAAVLDTPHGHLTVAATHLSFVPGWN-- 168

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                            L+  I   +    P ++ GD N               +    +
Sbjct: 169 --------------VLQLRQVIRALRTLPAPRILLGDLN---------------LPAWAT 199

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
            +        R         ++ +D+ + D+  +  L   +      +          +S
Sbjct: 200 RLTTGWHLLGRRPTYPAAAPRVQLDHAIADRRGFTQLPPVTAVRTPLST---------IS 250

Query: 294 DHCPISIDY 302
           DH P+ +D 
Sbjct: 251 DHRPLLVDL 259


>gi|261334720|emb|CBH17714.1| pantothenate kinase subunit, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 1467

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/330 (10%), Positives = 93/330 (28%), Gaps = 59/330 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQ 72
           +    +   ++R++S+N N L    G                 +  + + +D  D++ LQ
Sbjct: 25  IAVATATNAQLRVLSYNFNILPRGCGGF-----------QRERISSFLETVDQYDVIMLQ 73

Query: 73  EMGSYNAVAKVFPKNT--------------WCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           E+ + + +                      +  +  +++    +   +N      + +  
Sbjct: 74  EVYAASVLPYFLQNRMCFQKMLVDELVLRGFQHYAISKQPSYTTMLRNNVFSDNGLIIAS 133

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLEN 175
           +     + SY     + +      R  +   V++    G +  ++  ++           
Sbjct: 134 RFPIGQRGSYTFRSHERAVQSVR-RGCLFAEVKVPLTSGGEESIIFFNVHLRQEDSDDVT 192

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDF--------NRKINYLGNNDD--- 223
           +           A  +++  +  ++ + +PFV+AGDF        N         D    
Sbjct: 193 SEHVK-ETRQFAASVIRNMCSNPEDVAQIPFVLAGDFDVNGINLHNVGQPTKKYEDLLGE 251

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----------KIPIDYFVMDQNAYKFLIQ 272
                      +   + +       +                   DYF +          
Sbjct: 252 LQALGSGVREAVFDAQHRHPPTRPTELFFPTQSKLVRNSFSPQRQDYFFVSHTVAVK--- 308

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +     +  D  +     LSDH  +S   
Sbjct: 309 -NPDIHKFVSDSQQPYTY-LSDHFGVSAVL 336


>gi|254474796|ref|ZP_05088182.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp.
           R11]
 gi|214029039|gb|EEB69874.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp.
           R11]
          Length = 333

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 82/313 (26%), Gaps = 59/313 (18%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            S+   V +V+WN+      E                     + +     +V L E+   
Sbjct: 51  TSLPASVSVVTWNVERCLFPEDT-----------------AAHMERFAPQVVLLSEVDHG 93

Query: 78  NAVA----------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            A                   +F      +           K D N+      A+     
Sbjct: 94  MARTGQRHTTEAMAEAMGMTYLFGVEFHELDLGGPTEQAFCKDDFNSLGWHGNAILSAVK 153

Query: 122 RVLQQSYPLLGAKDSF-----------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
               +   L      +            R G R A+  ++  +   +  +  HL+S    
Sbjct: 154 PERVRLIRLDDHGHWYSSDEVPADPEQPRLGGRMAIAAVLPTDAGPVCFVSTHLES---- 209

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                  +   +    Q + L D +       +P VI GD N   +   + D   +T+  
Sbjct: 210 -------NADAAHRHAQFELLLDAVDDFAP-DMPVVIGGDLNTGNHLPPDFDWKRETLFD 261

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +           +        D  +       F I+   S        + S  +
Sbjct: 262 LARSRGYDWSATPDGMTTRASLITPHPDRVM---KLDWFCIRGLRSTDSALVPSLDSNDR 318

Query: 291 RLSDHCPISIDYD 303
            LSDH  +   +D
Sbjct: 319 PLSDHDAVWAQFD 331


>gi|71755785|ref|XP_828807.1| pantothenate kinase subunit [Trypanosoma brucei TREU927]
 gi|70834193|gb|EAN79695.1| pantothenate kinase subunit, putative [Trypanosoma brucei]
          Length = 1467

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/330 (10%), Positives = 93/330 (28%), Gaps = 59/330 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQ 72
           +    +   ++R++S+N N L    G                 +  + + +D  D++ LQ
Sbjct: 25  IAVATATNAQLRVLSYNFNILPRGCGGF-----------QRERISSFLETVDQYDVIMLQ 73

Query: 73  EMGSYNAVAKVFPKNT--------------WCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           E+ + + +                      +  +  +++    +   +N      + +  
Sbjct: 74  EVYAASVLPYFLQNRMCFQKMLVDELVLRGFQHYAISKQPSYTTMLRNNVFSDNGLIIAS 133

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLEN 175
           +     + SY     + +      R  +   V++    G +  ++  ++           
Sbjct: 134 RFPIGQRGSYTFRSHERAVQSVR-RGCLFAEVKVPLTSGGEESIIFFNVHLRQEDSDDVT 192

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDF--------NRKINYLGNNDD--- 223
           +           A  +++  +  ++ + +PFV+AGDF        N         D    
Sbjct: 193 SEHVK-ETRQFAASVIRNMCSNPEDVAQIPFVLAGDFDVNGINLHNVGQPTKKYEDLLGE 251

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----------KIPIDYFVMDQNAYKFLIQ 272
                      +   + +       +                   DYF +          
Sbjct: 252 LQALGSGVREAVFDAQHRHPPTRPTELFFPTQSKLVRNSFSPQRQDYFFVSHTVAVK--- 308

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +     +  D  +     LSDH  +S   
Sbjct: 309 -NPDIHKFVSDSQQPYTY-LSDHFGVSAVL 336


>gi|302695395|ref|XP_003037376.1| hypothetical protein SCHCODRAFT_48185 [Schizophyllum commune H4-8]
 gi|300111073|gb|EFJ02474.1| hypothetical protein SCHCODRAFT_48185 [Schizophyllum commune H4-8]
          Length = 429

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 81/318 (25%), Gaps = 55/318 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             +++R+ S N   L         K   K        +     N + D++ LQE+  ++ 
Sbjct: 4   SDRQLRVFSLNCWGL---------KFVSKDRRERVDAIAAALANAEYDVICLQEIWVFSD 54

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL------LGA 133
             +V       + +S                   +A+  +   V    +P       +  
Sbjct: 55  YERVRDAAAARLPHSKFYYSGALGA--------GLAILSRYPIVATAVHPYSLNGAPIDV 106

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                  G   A   L+      + V + HL +    D  E       +     A  +  
Sbjct: 107 GAGDWFVGKAAASATLLHPRLGLVQVFNTHLFAKGGEDGPEYNR----AHRLVNAWEIAK 162

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPN-------------- 231
              Q  E     + AGDFN     L            D W     N              
Sbjct: 163 LARQSAELGRYVIAAGDFNSIPTTLPMEVIRDHAALTDAWAITHANPGAGAASPLEALSR 222

Query: 232 ----DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE--SFSEILYNEDDI 285
                             +++        +DY +  Q           +    +   D +
Sbjct: 223 FGVTADSPLNTYSAGKPLDSHARAHWGKRLDYVLYRQPVRAGPHPRLKATQCRVVLTDLV 282

Query: 286 KSRGKRLSDHCPISIDYD 303
             R    SDH  +   ++
Sbjct: 283 PGRAFSYSDHFGVETTFE 300


>gi|170016857|ref|YP_001727776.1| exodeoxyribonuclease III [Leuconostoc citreum KM20]
 gi|169803714|gb|ACA82332.1| Exodeoxyribonuclease III [Leuconostoc citreum KM20]
          Length = 274

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 81/303 (26%), Gaps = 59/303 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++++        ++   R    + +L         DI  +QE         +  
Sbjct: 3   LISWNIDSINA-----AVEHKSARGEMTWDVL-NQIAARQPDIFAIQETKLKAV--GLTK 54

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           K    I         ++   +    ++   +  +   +    YP++ A         R  
Sbjct: 55  KQAQTITDLFPDYHIYTNSSTARSGYSGTMMLSRQEPLSV-DYPIINAP-GDMDLEGRI- 111

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               + +  +  +V  ++  +     +                Q L        ++  P 
Sbjct: 112 ----ITLEFENYYVSTVYTPNSGSGLARLEERGAWDDAYRAYIQAL--------DAQKPV 159

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD N                         + +  +           +   +      
Sbjct: 160 IFSGDMNVAHEEIDLKNPKTNHNSAGFTDQEREKFSALLRAGFTDTMRSQYPEQTGLYTW 219

Query: 251 L----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       +   IDY+++ +     +   +  +    +           DH PI++
Sbjct: 220 WAQISKTSKINNSGWRIDYYLVSERLAPKVKTTAVIDTGLRQ-----------DHAPITL 268

Query: 301 DYD 303
           +  
Sbjct: 269 EIT 271


>gi|166710372|ref|ZP_02241579.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 266

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 84/313 (26%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +                +    DAD++ +QE  +     ++
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------AWFAAQDADVLCVQETKAQE--HQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     +         +  S    ++ +A+  ++     ++       D   R    
Sbjct: 44  AGPD-----FLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E       V+  ++ S    +  +           Q  QWL+  + +   S  
Sbjct: 96  ------IEARFGNRSVVSFYIPSGSSGELRQGYK-------FQVMQWLRPILDEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN-----------------DSLIRFPKEKDSRCN 246
            +V+ GD+N     L   +      +                   +              
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADVPEDANAAEGRGWVDSY 202

Query: 247 A--------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       L   S             R 
Sbjct: 203 RVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLVTPCLRDTLKACSI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 ERFSDHAPYIVDY 264


>gi|149247002|ref|XP_001527926.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146447880|gb|EDK42268.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 299

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 84/291 (28%), Gaps = 24/291 (8%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQ 72
           VP   +   +V++ S+NI   +  +     K    R     +LL+Q   N     I+ LQ
Sbjct: 31  VPNAPTAPLQVQIYSFNIRN-ATSKLAEGEKPWSDRKHGVISLLKQGTSNASLPTIIGLQ 89

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+        +        ++   R    SK +    I+               S     
Sbjct: 90  EVLIEQLTDIIHGLGPGWTYFGVGRNDGSSKGEFAPVIYNTQDWEAVTSNTFWLSETPGK 149

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              S+  A NR    ++++    +   ++     +      +     S          L 
Sbjct: 150 PSKSWDAALNRIVTNVVLKNRKVEGKTINFFNTHY--DHKGKVAREKSS--------LLI 199

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + + ++  +     + GD N ++   G        +  +       +     C   K   
Sbjct: 200 EKLMKEAPAGNQV-LTGDLNSELKDPG-YKTLDAYLKESGKHATKIEGDRRTCTGFKGDG 257

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ID+    QN            + +        G   SDH P+    +
Sbjct: 258 E-SIIDFIWTSQN---------IPILQHCTISQDCCGCLCSDHRPVIAIIE 298


>gi|38234604|ref|NP_940371.1| putative exonuclease [Corynebacterium diphtheriae NCTC 13129]
 gi|38200868|emb|CAE50573.1| Putative exonuclease [Corynebacterium diphtheriae]
          Length = 235

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/295 (11%), Positives = 78/295 (26%), Gaps = 76/295 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+N                   +    ++ + +  D D++ +QE    +     
Sbjct: 1   MRIANWNVN----------------SARARVDRIQDFLERHDIDVLAMQETKCRDD---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            +       +    +A+  +      +       +  +     R
Sbjct: 41  ----------QFPEFKGYEAAHFGINQWNGVAILSRVGI---EDVLTSFGQPDYEEFEPR 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +        + V  +++ +   +      Y           +WL  +  Q      
Sbjct: 88  SIGAIC-----GGVRVWSLYVPNGREIAHPHYDYK---------LRWL--YALQHYGVTG 131

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             V  GDFN                           ++ +     +            A 
Sbjct: 132 DTVWCGDFNIAPTDNDVWDIDFFHGKTHVTEPERQAFEALTDIMPITSPEGYTYWDYTAG 191

Query: 249 KNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  +N  + ID+ +            + +      D  + +GK  SDH P+ +DY
Sbjct: 192 RFPKNQGMRIDFQL-----------SNMTPTGGFIDVEERKGKGASDHAPVVVDY 235


>gi|296110636|ref|YP_003621017.1| exodeoxyribonuclease A [Leuconostoc kimchii IMSNU 11154]
 gi|295832167|gb|ADG40048.1| exodeoxyribonuclease A [Leuconostoc kimchii IMSNU 11154]
          Length = 272

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 86/304 (28%), Gaps = 61/304 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKVF 84
           L+SWNI++++        ++   R    + +L +       DI  +QE       + K  
Sbjct: 3   LISWNIDSINA-----AIQHQSARGEMTWDVLNK-IAARKPDIFAIQETKLKPTGLTKKQ 56

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                 +F      +N S   +    ++      +N  +   ++P + A D+    G   
Sbjct: 57  AAALSDLFPDYHIYVNSS---TARPGYSGTMFLSRNEPLEV-TFPKISAPDTMDIEGR-- 110

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++ +  +  +V  ++  +     +  +             Q L        ++  P
Sbjct: 111 ----IITLEFEDFYVSTVYTPNSGSGLARLDDRGAWDDAYRSYLQGL--------DNKKP 158

Query: 205 FVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            + +GD N                         + +  +           +         
Sbjct: 159 VIFSGDMNVAHQEIDLKNFKTNHHSAGFTDPEREKFSALLEAGFTDTLRMKNPDTPGIYT 218

Query: 250 NL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                        +   IDY+++       +      +    +           DH PI+
Sbjct: 219 WWAQISKTSKINNSGWRIDYYLVSNRLAAKVSDSHVIDTGLRQ-----------DHAPIA 267

Query: 300 IDYD 303
           ++ +
Sbjct: 268 LEIN 271


>gi|164429579|ref|XP_964325.2| hypothetical protein NCU01961 [Neurospora crassa OR74A]
 gi|157073536|gb|EAA35089.2| hypothetical protein NCU01961 [Neurospora crassa OR74A]
          Length = 630

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/294 (9%), Positives = 59/294 (20%), Gaps = 71/294 (24%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTA 113
           ++     LDADIV +QE  +   +    +     W ++++       +S           
Sbjct: 27  VKAMFDTLDADIVVIQETKIQRKDLRDDMVLVPGWDVYFNLPTYKKGYSGVAIYTRSSKC 86

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             +R +         P    K                    ++I       +    +D  
Sbjct: 87  CPIRAEEGITGVLCPPNSSTKFRD-------------LPADQQIGGYPTPGQLSSDIDEA 133

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------------------- 212
           +                +   +           + GD N                     
Sbjct: 134 QLDSEGRIEFRQAFIDAMDARVRNLVSLGKEVFLCGDLNIIRNEMDTAGLPEQLKKEAMT 193

Query: 213 -RKINYLGNNDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNL------- 251
             +     +     + +                       +    R              
Sbjct: 194 LDQFISTPSRRFLNQIVFGGRVIGEPDEGREKPVLWDLCREFHPKRPGMYTCWETRKNAR 253

Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY +       + +  +              G   SDHCP+     
Sbjct: 254 PGNFGSRIDYVLCSSGIKDWFVDANIQ-----------EGLLGSDHCPVYATIS 296


>gi|156351269|ref|XP_001622436.1| hypothetical protein NEMVEDRAFT_v1g195293 [Nematostella vectensis]
 gi|156208975|gb|EDO30336.1| predicted protein [Nematostella vectensis]
          Length = 552

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/354 (12%), Positives = 95/354 (26%), Gaps = 70/354 (19%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +    ++ +N+  +     +                T + +   +  ADIV LQE+ + 
Sbjct: 180 SSGNFSVMCFNVLCDKYCTSQQYGYCPTWALNWDYRKTAIMKEILHYGADIVSLQEVETE 239

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL-- 131
                  P+     +       + ++  S +D       AI  R     ++++       
Sbjct: 240 QFHNFFLPQLKQDGYNGIFSPKSRARTMSEDDRKHVDGCAIFYRTTKFTMVKEFLTEFNQ 299

Query: 132 -------GAKDSFSRAGNR--RAVELLVEINGKKIWVLD------IHLKSFCFLDSLENT 176
                  G+ D  +R   +    + +L+E+        +      +      +     + 
Sbjct: 300 LAMANAQGSDDMLNRVMTKDNIGIAVLLELKDTGYIGYNGGQQVLVSNAHIHWDPEFRDV 359

Query: 177 YSPSCSLLSQQAQW-LKDWITQKKESL----------VPFVIAGDFNRKINY-------- 217
                 LL  + Q  LK +I                 +P V+ GD N   N         
Sbjct: 360 KLIQTVLLMHELQMILKQYIPGFHPHGGKNGTTPSKSIPIVLCGDLNSLPNSGVIEFLDN 419

Query: 218 -------------------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                                       N D    +     L +          +N    
Sbjct: 420 GRIPIDHCDFQEMQYQGFLSRLSNGSSKNGDTSGELTHGLRLKKAYDGDHQLPFSNLTYE 479

Query: 253 NKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            K  IDY            +  S +    +E+ I         SDH  + ++++
Sbjct: 480 FKGVIDYVYYSYDTLSPLGVLGSINPDYISENKIIGWPHPHFPSDHQALLVEFE 533


>gi|119574139|gb|EAW53754.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_b [Homo
           sapiens]
          Length = 382

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/351 (10%), Positives = 91/351 (25%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADIV LQE+ +    +
Sbjct: 14  FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYS 73

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 74  FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 133

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 134 NSEGSEAMLNRVMTKDNIGVAVLLELRKESIEMPSGKPHLGTEKQLILVANAHMHWDPEY 193

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINY--------- 217
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 194 SDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 253

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKI 255
               N+ DF +              K+                         N     K 
Sbjct: 254 GVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYTNYTFDFKG 313

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 314 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 364


>gi|118102266|ref|XP_001232552.1| PREDICTED: hypothetical protein isoform 2 [Gallus gallus]
          Length = 298

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 73/271 (26%), Gaps = 33/271 (12%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
            K+      L+         D+V LQE+ S    + +  K   C  +S            
Sbjct: 23  SKQRQERIRLIGDRLCQEGFDLVLLQEIWSERDYSDLKAKLGGCCPFS--------HYFR 74

Query: 107 NNDIHTAIAVRKKNVRVLQQSYP-----LLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           +  I + + V  K   +    Y                   +    ++V I      +  
Sbjct: 75  SGVIGSGLCVFSKFPILDTLLYQYSLNGYPYMLQHGDWFCGKSVGLVVVRIAEITFNIYV 134

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            HL +                    QA  L  +I    ++    ++ GD N     +G  
Sbjct: 135 THLHA-----EYSREKDAYLPHRVVQAWELAQFICHTAKAADVVLLGGDLNMHPGDVGVR 189

Query: 222 DDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PIDYFVMDQNAYKF 269
               W  +    +  +  +  +  C    N    +            IDY +  +    F
Sbjct: 190 LLRGWTGLHDAFTEAKHFEGCEDGCTLIPNNCFTVKSELQPFPLGIRIDYILY-KAVSSF 248

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            ++    E+      +       SDH  +  
Sbjct: 249 TVKC--EELRTTTGTVPGMDIPYSDHEAVMA 277


>gi|320334708|ref|YP_004171419.1| exodeoxyribonuclease III Xth [Deinococcus maricopensis DSM 21211]
 gi|319755997|gb|ADV67754.1| exodeoxyribonuclease III Xth [Deinococcus maricopensis DSM 21211]
          Length = 267

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 82/301 (27%), Gaps = 80/301 (26%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A +VR+ + N+N L                 +    LR++      D++ LQE+ +   +
Sbjct: 9   AARVRITTLNVNGLRS---------------ALRKGLREWVVTHAPDVLLLQEVRADP-M 52

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F    +   +       +          + +A+  +      +    L   D   R 
Sbjct: 53  PEAFEDLGYASAWHPAVKPGY----------SGVAILSRRGLEDVRVGMGLADVDVEGR- 101

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   ++      + V  ++L S    +  +        L     + L         
Sbjct: 102 --------VLSAVTDGVRVASVYLPSGSSGEVRQGFKDRVLPLYHAWVESLL-------- 145

Query: 201 SLVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIRFPKEKDSRCN 246
            L P VI GD+N     +   +                W T      L    + +     
Sbjct: 146 PLGPLVIGGDYNVAHQNVDIRNWRGNLKNSGFLPHERAWMTQHLAAGLTDAHRARLGERA 205

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 N+           IDY +                 +   +    R  RLSDH P
Sbjct: 206 EYTWWSNRGNAYANDVGWRIDYLLTSG--------------VALREVRVDRSVRLSDHAP 251

Query: 298 I 298
           +
Sbjct: 252 L 252


>gi|261315552|ref|ZP_05954749.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M163/99/10]
 gi|261317992|ref|ZP_05957189.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94]
 gi|261758554|ref|ZP_06002263.1| endonuclease/exonuclease/phosphatase family [Brucella sp. F5/99]
 gi|265989022|ref|ZP_06101579.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M292/94/1]
 gi|261297215|gb|EEY00712.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94]
 gi|261304578|gb|EEY08075.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M163/99/10]
 gi|261738538|gb|EEY26534.1| endonuclease/exonuclease/phosphatase family [Brucella sp. F5/99]
 gi|264661219|gb|EEZ31480.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M292/94/1]
          Length = 217

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 59/209 (28%), Gaps = 40/209 (19%)

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +   R   R  + + + I G+ + +   HLKS     + ++  + S  +   +A+ ++  
Sbjct: 7   EPHDRIFKRDCLNVDLRIGGEPLSLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRI 66

Query: 195 ITQKKE----SLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSL 234
           I +K      +   ++I GDFN                     +         +    ++
Sbjct: 67  IEEKFGIDRVTERRWLICGDFNDYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAV 126

Query: 235 IRFPKEKDSRCNA-NKNLRNKIP----IDYFVMDQNAY---------------KFLIQES 274
               +                      +DY +                      +     
Sbjct: 127 NLVERRPVMDRWTLYHTRGPLERHLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFP 186

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +           + SDHCP+S+  +
Sbjct: 187 PEQNVDRYPRTGWDRPKASDHCPVSVTLN 215


>gi|255971483|ref|ZP_05422069.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255962501|gb|EET94977.1| conserved hypothetical protein [Enterococcus faecalis T1]
          Length = 358

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 88/318 (27%), Gaps = 62/318 (19%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP 179
             +   L           N  R  +E    I G  K++ V ++HL+++   D        
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFSIKGTDKELVVFNLHLEAYDNGDGKIA---- 235

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDD 223
                  Q++ L D ++Q+       +  GDFN+                    +   D 
Sbjct: 236 -------QSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPNLGEAGWAPGEIDPADL 288

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   D      +  +     +        ID F++  N     ++    +  Y   
Sbjct: 289 PKHFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVVVHSVKTKDEQFKYT-- 346

Query: 284 DIKSRGKRLSDHCPISID 301
                     DH P+ ++
Sbjct: 347 ----------DHQPVKME 354


>gi|323452214|gb|EGB08089.1| hypothetical protein AURANDRAFT_71687 [Aureococcus anophagefferens]
          Length = 1302

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/345 (10%), Positives = 82/345 (23%), Gaps = 76/345 (22%)

Query: 15   PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73
                  A+ +++VS N+  L      +               L     +   D++ L E 
Sbjct: 974  AAPPDGAKTLKVVSVNVAGLRAVLDEAKGP-------EKRDALAALVASEAPDVLCLNEH 1026

Query: 74   -------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                     +   +A + P  +   F  +                   AV          
Sbjct: 1027 KLKDEDVDEAKEKLAALLPAYSRAEFTCSGPPGKKGYSGVAMLFRDGGAVPADAEVTRGM 1086

Query: 127  SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                  A D       R    L + + G  + ++  ++ +           + +      
Sbjct: 1087 PGVDAAADDDIVNHEGR---LLTLALPG-TLSLVATYVPNSGQDLKRLAYRTEAG----G 1138

Query: 187  QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------------------- 223
              + L  ++   K +  P  + GD N        ++                        
Sbjct: 1139 WDRSLAAYVASLKAAG-PVAVIGDLNCCHAAADMHNMHARPNFEELNSGDVAIEDQYAGL 1197

Query: 224  ----------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----------PI 257
                            F K +D    +  F ++  +          ++           +
Sbjct: 1198 SAIKKQAGLTVEERVSFTKLLDDAGLVDSFRRQHPAATGVFTYYSQRVVANRPANRGLRL 1257

Query: 258  DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            DY +   +  +     +  +     D    +     DH P+   +
Sbjct: 1258 DYVLATPDLLEDGAAPALVDSFVLSDADTPQLA---DHTPVGATF 1299


>gi|322386957|ref|ZP_08060581.1| RgfB protein [Streptococcus cristatus ATCC 51100]
 gi|321269239|gb|EFX52175.1| RgfB protein [Streptococcus cristatus ATCC 51100]
          Length = 271

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 76/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            S    L +       D++ LQE+       +V     +                     
Sbjct: 18  ESKLNQLAERILQEKYDVICLQEVNQLVESEQVVQAPFYYAVDGAIPIHQDHYALRLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +  S    R+ +  
Sbjct: 78  LAEAGLDYYWSWAYNHIGFDIYNEGVAILSRKPLKARE--LLVSDVNDPSDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E++G+ I V   HL  +                          + ++  +   P V+ 
Sbjct: 136 ETELDGRLITVASCHLSWWDKGFQG----------------EWAKFESELLQVETPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMD 263
           GDFN  ++Y G        +   DS     +   +             ++ + IDY    
Sbjct: 180 GDFNNPVDYEGYQHILQSPLALQDSHKVAVQTIGAATVEGDIAGWAGNKDALKIDYIFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ++         F+           RG  +SDH  +     F
Sbjct: 240 KD---------FNVERSAVVFDGQRGPVVSDHFGLEAQVHF 271


>gi|301090968|ref|XP_002895679.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262097089|gb|EEY55141.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 356

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 107/333 (32%), Gaps = 73/333 (21%)

Query: 21  AQKVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            + + L+++N+          G  L  +      S      +  K    D+V LQE    
Sbjct: 9   PRSLSLMTFNLLAPCYFRH--GGRLESDDQVSFLSRAQASIRAIKREQCDVVCLQEFWFK 66

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +   + F        +     ++ +KR  + +   A+ V K+   +       + + D  
Sbjct: 67  HEYQRAF-----RHAFQPTHYVHTAKRPGDKEDGLAVFVDKRKFEL-----HNVESVDLV 116

Query: 138 SRAGNRRAVELLV---------EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
             AG+R A+ + V          ++ +   V++ HL    F  +          +     
Sbjct: 117 EEAGDRVALLMHVATKWNREKAPLDQRSFLVVNSHLT---FPHNEMYASLRLSQIHRV-L 172

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-A 247
             ++ ++ ++    +P ++ GDFN        ND  ++ +  +     F +         
Sbjct: 173 SAVRKYVARQDLCDIPVLLCGDFN------DYNDPVYRLVTKHGYASLFAEMHGREARIT 226

Query: 248 NKNLRNKIP-IDYFV---------------------MDQNAYKFLIQESFS--------- 276
           + N  N+   +D+                       +D +     + +            
Sbjct: 227 HCNHNNREVGVDFIFGARLDSDQAQTLLDPRLQLKPVDCHLVPRRLPDVVRLKRPQFGHD 286

Query: 277 -------EILYNEDDIKSRGKRLSDHCPISIDY 302
                   +L +E+ +    + +SDH P+   +
Sbjct: 287 WRHVQSPVLLTDEEALVDYWRMVSDHRPLVAKF 319


>gi|242039787|ref|XP_002467288.1| hypothetical protein SORBIDRAFT_01g022760 [Sorghum bicolor]
 gi|241921142|gb|EER94286.1| hypothetical protein SORBIDRAFT_01g022760 [Sorghum bicolor]
          Length = 391

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/299 (10%), Positives = 69/299 (23%), Gaps = 49/299 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80
             +++++N+    E   V                L    K    D +  QE+    Y  +
Sbjct: 117 TFKIMTYNV-WFREDVEVI----------RRMDALGDLIKQHSPDFICFQEITPYIYMLL 165

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K      +    S E+ I                   K         P L +       
Sbjct: 166 QKSDWWQQYKCLLSHEKAIQMPYY---------CMQLSKLPVKASDCTPFLNSIMGRE-- 214

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +       G+   ++           +              QA+   + + +   
Sbjct: 215 -----LCFTSVSTGEMKKLMIGTTHLESPCPAPPKWDQMYSKERVDQAKQCLEILGRFPN 269

Query: 201 SLVPFVIAGDFNRKINYLGNND----DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +    ++ GD N      G            ++       +  +  +    + N + +  
Sbjct: 270 A----ILCGDMNWDDKGDGPFPLQDGWTDAWVELKPGEDGWTYDTKANGMLSGNRKLQKR 325

Query: 257 IDYF--------VMDQNAYKFLIQESF----SEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D F        ++                    +  E  +       SDH  + +   
Sbjct: 326 MDRFVCKLADFKIVSIEMIGKEAIPGVSYYKETKIRKESRMVELPVFPSDHFGLVLTIT 384


>gi|210621450|ref|ZP_03292642.1| hypothetical protein CLOHIR_00585 [Clostridium hiranonis DSM 13275]
 gi|210154765|gb|EEA85771.1| hypothetical protein CLOHIR_00585 [Clostridium hiranonis DSM 13275]
          Length = 358

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/323 (11%), Positives = 82/323 (25%), Gaps = 63/323 (19%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           A+   + ++NI               G        +    +          +D D  F+Q
Sbjct: 57  AKTHSITTYNIGFGAYSQDFDFFMDGGTESKAKDRETVMKNIKGSVNELNKIDPDFAFVQ 116

Query: 73  EMGSYNAVAK----------VFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRK 118
           E+   ++ ++                   F    ++       ++             + 
Sbjct: 117 EIDIDSSRSRKTDQRVLVAHGLDDEYTNCFAFNYKVPYIIYPFNDMHGKVSAGQGTYSKY 176

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTY 177
           K     + S P   +  +     +R  +   V+  N K++ ++++H+ ++          
Sbjct: 177 KFETAERISLPTDQSWLARLFGLDRCMIVNRVKTTNNKELVLINLHMSAYDKGGE----- 231

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                   +Q   L++ +  + +     +  GD+N  I     N        P+      
Sbjct: 232 -----FRQKQLNMLEEILEDEYKKGNYVIAGGDWNHVIPTTDINKFAKTEERPDWYDYIP 286

Query: 238 PKEKDSRCN---------------ANKNL-RNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                                              ID F++  N        S       
Sbjct: 287 ENFSPKGYRFEVDENVPTNRTAGIPYDKDVNFTAIIDGFIVSDNINVVAKNGS------- 339

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                    + SDH P     +F
Sbjct: 340 -----DLQFKYSDHNP--TTIEF 355


>gi|146343131|ref|YP_001208179.1| hypothetical protein BRADO6329 [Bradyrhizobium sp. ORS278]
 gi|146195937|emb|CAL79964.1| conserved hypothetical protein; putative signal peptide; Ricin-type
           beta-trefoil lectin domain [Bradyrhizobium sp. ORS278]
          Length = 570

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 94/317 (29%), Gaps = 45/317 (14%)

Query: 1   MIRKYVLALVFF-----LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M  +++ + + F     L     + +     +++N+                  + +   
Sbjct: 1   MKIRFLASALAFGCSALLGSPLQAASGTFNTLTYNV--------AETPTAYNGGSDAHSK 52

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           L+  Y +     IV +QE         ++    +            S       I   + 
Sbjct: 53  LISCYLRQFG--IVNVQE-------DFLWHAALYDTCDDHPYRTPTSGTA---GIGDGLN 100

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
              +               DS +      ++       G  +   ++H +S      L  
Sbjct: 101 TLSRYGFDDLDRVTWDKRADSDALTPKGFSLVRTRLAEGVYLDFYNLHAQSGTSSTDLAY 160

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-------KTI 228
           + +          Q L  +I     +    ++ GD N +    G N   +         I
Sbjct: 161 SEND--------VQQLLTYIEAN-SAGNTVMVMGDTNTRYTRAGQNMWEFLHHGFSDAWI 211

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +        P      C + +  R    I D  +   N +  L   S+ +    +D + +
Sbjct: 212 EAVRGGSVPPVGDALVCGSTQTARPDCEIVDKVLWRNNGFLNLQASSYVD---RQDALDA 268

Query: 288 RGKRLSDHCPISIDYDF 304
            G +LSDH PI +++ F
Sbjct: 269 SGAQLSDHHPIEVNWSF 285


>gi|66472474|ref|NP_001018474.1| CCR4-NOT transcription complex subunit 6-like [Danio rerio]
 gi|63100861|gb|AAH95634.1| CCR4-NOT transcription complex, subunit 6-like [Danio rerio]
 gi|182890998|gb|AAI64274.1| Cnot6l protein [Danio rerio]
          Length = 559

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/350 (9%), Positives = 88/350 (25%), Gaps = 69/350 (19%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78
             ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +     
Sbjct: 184 FTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEITNCDADIISLQEVETEQYYT 243

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              +      +  F+  +                  +  + +   ++Q+           
Sbjct: 244 FFLETLKDRGYDGFFCPKSRAKLVSEQERKHVDGCGVFFKTEKFALVQKHTVEFNQVAMA 303

Query: 138 SRAGNRRAVELLVEINGKKIWV---------------------LDIHLKSFCFLDSLENT 176
           +  G+   +  ++  +   + V                     L +      +     + 
Sbjct: 304 NSEGSEVMLNRVMTKDNIGVAVLLEVKEDLFAAGLKPPPEKQLLLVANAHMHWDPEYSDV 363

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLV--------PFVIAGDFNRKINY----------- 217
                 +   + + + +  +    S          P V+  D N   +            
Sbjct: 364 KLIQTMMFLSELKSIAERASGSINSSSPTSETSSIPIVLCADLNSLPDSGVVEYLSNGGV 423

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSR--------------------CNANKNLRNKIPI 257
             N+ DF +    +         K+ +                       N     K  I
Sbjct: 424 AENHKDFKELRYSDCLTNFSCNGKNGKPDGSITHSFQLKSAYEGNLMPYTNYTYDFKGVI 483

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIK---SRGKRLSDHCPISIDYDF 304
           DY    +     L      E  + +D+           SDH  +    ++
Sbjct: 484 DYIFFSKTHMSVLGVLGPLETQWLKDNNITGCPHPHIPSDHFSLLAQLEY 533


>gi|118361191|ref|XP_001013826.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89295593|gb|EAR93581.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 276

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 82/289 (28%), Gaps = 58/289 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           QK++ +S+N+                         LR+     D D + LQE+       
Sbjct: 36  QKLKFISYNVWF------------DQFNFVERNQELRKLFLKHDPDFICLQEVT------ 77

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +    +  S + L +     S+   +  + +  K                +++   
Sbjct: 78  ----QYFIQLLSSDKELCSKYYFSSSFVQNYDVLILSKYPI--------SFYCRNYNSNQ 125

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +  ++ +N   + +   HL+S             +      Q Q ++D +++  ES
Sbjct: 126 GRNLLVGVINVNEVNLAIGTTHLESLP----------QNKEFRKYQLQVIQDELSKYPES 175

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               +  GD N +     +                   E           + K  +D  +
Sbjct: 176 ----IFMGDLNLETENESSYLP--------SQYQDTWLELHPGDQGVTFPQIKKRLDRVL 223

Query: 262 MDQNAYKF------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           + Q+          + +E        +          SDH  +  +  F
Sbjct: 224 LKQSNLWKTTKIEVIGKEPIPLYNTKKPGNLYEVTTPSDHYGLYSEITF 272


>gi|21232830|ref|NP_638747.1| hypothetical protein XCC3401 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767099|ref|YP_241861.1| hypothetical protein XC_0763 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990191|ref|YP_001902201.1| putative nuclease / phosphatase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21114655|gb|AAM42671.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572431|gb|AAY47841.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167731951|emb|CAP50137.1| putative nuclease / phosphatase [Xanthomonas campestris pv.
           campestris]
          Length = 245

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 80/286 (27%), Gaps = 60/286 (20%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++ NI   S     S +               +    + + A     DIV LQE    + 
Sbjct: 2   LTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLAGER--DIVGLQESDPGSL 59

Query: 80  VAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +    +  +    +     +H   R       +A  +  K   +  Q + L G      
Sbjct: 60  RSGFTNQTHYLAERAGFNYWSHQPNRRMGGVASSANGLLSKLEPLEVQDHALPG------ 113

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R G R  +        + + V   HL                 +    Q  ++ + ++  
Sbjct: 114 RIGGRGILLAKFGQGREGLAVAVAHLSLG-------------ANSRMAQLAFIAELLSDH 160

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--NANKNLRNKIP 256
                  ++ GDFN   +                 L R  + +   C  +   + R    
Sbjct: 161 PN----VMLMGDFNCVADRPEMQA-----------LYRHTRLQPPSCVVHTFPSWRPDRA 205

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID+ ++  +                 +  ++     SDH  + +D 
Sbjct: 206 IDHILVSDSL--------------VIEHTEAIPAAFSDHLAVGMDL 237


>gi|42523889|ref|NP_969269.1| hypothetical protein Bd2451 [Bdellovibrio bacteriovorus HD100]
 gi|39576096|emb|CAE80262.1| hypothetical protein Bd2451 [Bdellovibrio bacteriovorus HD100]
          Length = 433

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/289 (10%), Positives = 73/289 (25%), Gaps = 48/289 (16%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAVAKVFPKNTW 89
           +   +    V                +    + +   D+V LQE+ + + + ++      
Sbjct: 109 LQNFNAYGPVYAKG-----IEERTGRMTALLQGIPKCDVVHLQEVWNDSQINQIENDLKR 163

Query: 90  CIFYSTERLINHSKRDSNNDIHT------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               S           S            A AV  +   +      L            R
Sbjct: 164 QYSISAPNKEERIGVMSLFMGDVKGTETHAFAVNNEGGVLDSVREAL----------NVR 213

Query: 144 RAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           +A  ++        +  + ++ HL               S ++   Q   L  W  + K 
Sbjct: 214 KAFHVVKSGFFGIDEDFYFINTHLHPT------------SEAVRLTQVMDLLRW--RMKH 259

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI--- 257
             +  +++GDFN  ++ +            +                         +   
Sbjct: 260 QDLKMLLSGDFNANVDSVERGFVMATLATRDAMEDAMGGYPKKGYCTYCARNPLGWLFSD 319

Query: 258 ---DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              DY              +   +    +   +  + LSDH  + +++ 
Sbjct: 320 QVFDYIFYSN---VGQSATTLQVLDGQVNMQGTPRRPLSDHYGVRVEFS 365


>gi|325180657|emb|CCA15062.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 515

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 80/291 (27%), Gaps = 46/291 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++++NI T    E      +  +        + Q   + + D   +QE          
Sbjct: 48  MKVMTFNIRTDQAPEDAGG--HCTQWDGIRKNTVVQQITSQNPDFFGVQETSDAQKGFLD 105

Query: 84  FPKNTWCIF---------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               T+             S E    + ++D    I + +     N  V           
Sbjct: 106 QQLGTYAAIGASSGSLNGISGEWNAIYHQKDIWAPIASGMFWLGPNPDVASVD------- 158

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             +     R  V    +     I V  ++ +     + L              A+ +   
Sbjct: 159 --WGMTHYRTCVWGRFKHIPTGITVCVLNTRWETLGNDLAQNNG---------AKLIVQR 207

Query: 195 ITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           +    ++S    V+ GD N K +         + +        F  +  S+  ++K    
Sbjct: 208 LGSLCQQSDKAVVLLGDMNAKSSSPAVQYLLTQDLKDESVDPTFCGDLVSKTCSDKF--- 264

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               D+ +         +      I  +    +      SDH  + +   F
Sbjct: 265 ----DFILHR-------LPAGVCAIESSVIRQQFNECYPSDHA-VLVT-SF 302


>gi|255524521|ref|ZP_05391476.1| Endonuclease/exonuclease/phosphatase [Clostridium carboxidivorans
           P7]
 gi|296186020|ref|ZP_06854425.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           carboxidivorans P7]
 gi|255511817|gb|EET88102.1| Endonuclease/exonuclease/phosphatase [Clostridium carboxidivorans
           P7]
 gi|296049288|gb|EFG88717.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           carboxidivorans P7]
          Length = 328

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 87/312 (27%), Gaps = 34/312 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTT---------------SDYTLLRQYAKNLDAD 67
           K+ +++WNI   +E   V    ++ +                      ++         D
Sbjct: 8   KLSVMTWNIYLGAELTPVFTACSAEQIPELATQVFRQFLATNFPERAKVIANQIDLKKPD 67

Query: 68  IVFLQEMGSYNAV---AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---NV 121
           I+ LQE   +  +   + +   +   I     R        +  + +   A+       +
Sbjct: 68  IIGLQEAVIWKLISPDSHMVSYDFVNILIHELRYRGLKYEVAAVNQNAQAALPSSTGNTI 127

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVE---LLVEINGKKIWVLDIHLKSFCFLDS---LEN 175
            +  +   L+  +D       + A       + I+ +    L                  
Sbjct: 128 SLSDRDVILIRDRDDMKVIKKQEANFKNNFQINISKQTFTTLRGWSALDVCFQENVFRIV 187

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                   L  QA    + +    ++ +P +  GDFN   N               DS I
Sbjct: 188 NTHLDTDSLEVQAAQANELLDGPGKTELPLIFIGDFNSNANENETTYANLIAAGFKDSWI 247

Query: 236 RFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              K K   C  + +           ID+ ++     K+        I  ++ D      
Sbjct: 248 EAGKNKGFTCCQDSDLLNAESSLNERIDFILLKN--KKYWGAVKAEAIGQSQLDRTKTRL 305

Query: 291 RLSDHCPISIDY 302
             SDH  + +  
Sbjct: 306 WPSDHAGVFVKL 317


>gi|297194844|ref|ZP_06912242.1| endonuclease/exonuclease/phosphatase [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197720692|gb|EDY64600.1| endonuclease/exonuclease/phosphatase [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 247

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 70/280 (25%), Gaps = 58/280 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++ +NI                     D   L +  +  + D+VF+QE   +    K 
Sbjct: 19  VRVLGYNIR----------------SMRDDEEALARVIRACEPDLVFVQEAPRFFRWRKH 62

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +               +           + +      V +    LL       R   R
Sbjct: 63  AARLAAKTDLVMLSGGATAAG--------PMLLCSLRATVERTEDVLLPRTPGLHR---R 111

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V   G ++ ++  HL             S +      QA  L D +        
Sbjct: 112 GFATAVVRFAGARVGLISCHL-------------SLAADERLAQAGLLLDRLKAMDVPHA 158

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++AGD N +                 +    +        + +        ID     
Sbjct: 159 --IVAGDINERPGGRAFGRL------AGELQDCWAVAPWGGEHTSTAAGPHQRIDAVFAT 210

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDY 302
           +             +     D+     R  SDH P+    
Sbjct: 211 E---------GVEVLGCGVPDLPPADLRAASDHLPVLAAL 241


>gi|330809858|ref|YP_004354320.1| endonuclease [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377966|gb|AEA69316.1| putative endonuclease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 266

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 80/291 (27%), Gaps = 52/291 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74
            +   ++R+++ N +                        LR+  ++  AD+VFLQE+   
Sbjct: 18  PAAVHRLRILTVNTHKGFTALNRRF----------ILPELREAVRSTGADLVFLQEVLGE 67

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
              + +    +P+ +   F +     +  + +     D H   A+  K      ++  + 
Sbjct: 68  HDRHASRYDNWPRTSQYEFLADSMWSDFAYGRNAVYPDGHHGNALLSKYPIRQFRNLDVS 127

Query: 132 GAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      R  +  ++++ G   +  + +HL        L+                
Sbjct: 128 ITG-----PERRGLLHCVLDVPGHAAVHAICVHLSLLESHRQLQLKLLCQLL-------- 174

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
                        P +IAGDFN                        F             
Sbjct: 175 ------DSLPEDAPVIIAGDFNDW-----QLRGNLALARRGYLHEAFELHHGRPARTYPA 223

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               + +D   +   +               +         LSDH P+S++
Sbjct: 224 RFPLLRLDRIYLRNASSH-----------APQILGNKPWTHLSDHLPLSVE 263


>gi|325118238|emb|CBZ53789.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Neospora caninum Liverpool]
          Length = 1097

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 10/196 (5%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + +VS+N   L  +        +   T    + +     + ++DI+ LQE+       
Sbjct: 293 DSINIVSFNAGLLEYRLCGIQVYQNPPFTRRRLSHIPISLLDTNSDIICLQEVYDDIHAD 352

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +               +          +H  + V  +      + +P     +     G
Sbjct: 353 FLVDSMR-----HVFPYVGRRTSGGRFALHNGLMVLSRFPIRHTRFHPFHDVTNIERLFG 407

Query: 142 NRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           ++  +E  ++I G  +  V +IHL S               +L S + Q +         
Sbjct: 408 SKGMLECGIDIPGVGVVAVFNIHLASGAVDPESPYV----EALRSAEIQQVLSACEDAGI 463

Query: 201 SLVPFVIAGDFNRKIN 216
                ++ GD N   +
Sbjct: 464 RGEVPLVVGDLNAAPD 479


>gi|183230660|ref|XP_001913468.1| phospholipase C precursor [Entamoeba histolytica HM-1:IMSS]
 gi|169802804|gb|EDS89753.1| phospholipase C precursor, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 295

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 73/222 (32%), Gaps = 13/222 (5%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV 80
           Q ++++++NI                +R  +      +       DIV  QE+   +++ 
Sbjct: 8   QTIKILTYNIYCRPPGITARGNDYKKERLMTFCD---EELNKY--DIVAFQELFGAFSSK 62

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++F +      +  E  +   K          + +  +   V Q          S   +
Sbjct: 63  RRIFIEKAKQQGFVYEAHLERPKWPIYPVDG-GVCILSRFPIVSQHQKIYTRGCYSDGAS 121

Query: 141 GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198
             +  +   ++I  GK+I +   HL++  +        + S    + Q      +I +  
Sbjct: 122 A-KGVIHTKIDIGFGKEIHLFSTHLQADYY--ESREDNAKSRRHRNTQINECLHFINECT 178

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                P +  GD N K       DDF  T+  N+  I     
Sbjct: 179 AYDNDPIIFEGDLNIKGG-TKEYDDFLTTLHSNEFDIEAHDF 219


>gi|322796562|gb|EFZ19036.1| hypothetical protein SINV_07758 [Solenopsis invicta]
          Length = 520

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 78/321 (24%), Gaps = 38/321 (11%)

Query: 22  QKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              R++ +NI          S+                   L+ +     + DI+ LQE+
Sbjct: 198 NSFRIICYNILADTYADSDFSKDVLFPYCPQYALDMDYRKQLILKEIIGFNGDIMCLQEV 257

Query: 75  GSYNAVAKVFP---KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-- 129
                   + P      +   + T+  I+       N         + +V      +P  
Sbjct: 258 DKSIYEYDLLPSLYMLNYDGVFITKNEISEGLATFFNQDRFEKLGFQCSVMAQNVDFPKF 317

Query: 130 --LLGAKDSFSRAGNRRAVELLVEI------NGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +    D+        +    +++        +   +L  +   +   D+         
Sbjct: 318 AAIWSKIDNDKMKERFLSRNTTIQVTTLRSKENRSEILLIGNTHLYFKPDADHIRLLQGY 377

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------NDDFWKTID 229
             ++      K    +  E  V  ++ GDFN                     D    T +
Sbjct: 378 YAVTYIHDVAKRIQEENSECNVSVILCGDFNSVPECGIYQLMTENYVPETCEDWKSNTEE 437

Query: 230 PNDSLIRFPK-----EKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNED 283
              ++             +    N        +DY            +    S+      
Sbjct: 438 AIKNISLTQDLCMSSACGTPEYTNYTPEFSACLDYIFYERDKFEVEQVVPMPSKEELTLH 497

Query: 284 DIKSRGKRLSDHCPISIDYDF 304
                    SDH  +  D  F
Sbjct: 498 TGLPSVVFPSDHISLCADLKF 518


>gi|290993412|ref|XP_002679327.1| predicted protein [Naegleria gruberi]
 gi|284092943|gb|EFC46583.1| predicted protein [Naegleria gruberi]
          Length = 332

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/329 (11%), Positives = 92/329 (27%), Gaps = 58/329 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +   +  ++++++N+N             +  +  S+   +       +AD++ LQE 
Sbjct: 15  SSSNVASSYLKILNYNVNF---------VYATKSKLESNALFVFHALFRSEADVICLQET 65

Query: 75  --------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKK 119
                            N    +              +  +      N      +A   K
Sbjct: 66  HAGYESAFKQIKWKDVRNLDQNLNGNLDEKFKEEQSLISLYPHYVFYNHGAAGGMAFLSK 125

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVE-----LLVEINGKK------IWVLDIHLKSFC 168
              +      L                      + V++  K       + ++++HL+   
Sbjct: 126 YEFLENSQITLATNAKDQYGKKVVDGSWFPMHLITVKVPEKTTGNVKQVLLVNVHLRPPL 185

Query: 169 FLDSLENTYSPSCS--LLSQQAQWLKDWIT-----QKKESLVPFVIAGDFNRKINYLGNN 221
             D   + ++   +      + ++L +++          +  P VI GD+N   N     
Sbjct: 186 NDDGSASLWTARMTNVYRLNEIKYLYNYLEGIGIISFGNTTCPIVILGDYNEHDNDPSCE 245

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKN----LRNKI--PIDYFVMDQNAYKFLIQESF 275
                 +  +      P+ +++     K             +D+ V  +  +K L  +  
Sbjct: 246 FLKLSNLFQDALNEFVPQNRETHRWPLKFVWGLYTYWWHKRLDHCVYSKQFFKCLDCKVI 305

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            SDH P+    +F
Sbjct: 306 D----------GYEMNASDHQPVLTTLEF 324


>gi|262202977|ref|YP_003274185.1| endonuclease/exonuclease/phosphatase [Gordonia bronchialis DSM
           43247]
 gi|262086324|gb|ACY22292.1| Endonuclease/exonuclease/phosphatase [Gordonia bronchialis DSM
           43247]
          Length = 314

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 81/300 (27%), Gaps = 66/300 (22%)

Query: 7   LALVFFLVPC----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           LALV+  +P     +    ++  +++ N+                    +D   L +   
Sbjct: 74  LALVWSQLPLWIGESPPAGERFTVITANLRL----------------GEADTEALAELVD 117

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           +  AD++ LQE+ +  A+A++                               A+      
Sbjct: 118 SSHADLLSLQEV-TPEALARIRAGRIVARL--------PHVYAIPVSQTGGTALLSAQPL 168

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           V     P    +   +      A        G ++  +        F+ S ++       
Sbjct: 169 VGAAPVPGTADRMLSAVTDLPGA-------PGTRVLAIHPRAPLGGFVTSWDSD------ 215

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                 + L D++          V AGDFN   +                  I       
Sbjct: 216 -----LRALGDYLR--STPQQRVVAAGDFNATWDSSRYRALLTDGFADAAEQIGA--GFS 266

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               AN++ R  I +D+ +                  +    + +     SDH  + +  
Sbjct: 267 PTFPANRSRRPFITLDHVITRG---------------FAAASLSTHDIPGSDHRAVVVTL 311


>gi|221488239|gb|EEE26453.1| endonuclease/exonuclease/phosphatase domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1236

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 10/196 (5%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + +VS+N   L  +        +   T    + +     + ++DI+ LQE+       
Sbjct: 453 DSINIVSFNAGLLEYRLCGIQIYQNPPFTRRRLSHIPISLLDTNSDIICLQEVYDDLHAD 512

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +               +          +H  + V  +      Q +P     +     G
Sbjct: 513 FLVDSMR-----HVFPYVGRRTSGGRFALHNGLMVLSRFPIRHTQFHPFHDVTNIERLFG 567

Query: 142 NRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           ++  +E  ++I G  +  + +IHL S               +L S + Q +         
Sbjct: 568 SKGMLECGIDIPGVGVVAIFNIHLASGAVDPESPYV----EALRSAEIQQVLSACEDAGR 623

Query: 201 SLVPFVIAGDFNRKIN 216
                V+ GD N   +
Sbjct: 624 RGEIPVVVGDLNAAPD 639


>gi|16082631|ref|NP_394956.1| exonuclease III [Thermoplasma acidophilum DSM 1728]
          Length = 250

 Score = 66.9 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 78/302 (25%), Gaps = 79/302 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +SWN+N L                           K  D   + LQE  + +      
Sbjct: 4   KFLSWNVNGLRAAVKNGA---------------VSVFKQDDYFGIALQETKADST---SV 45

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P+  + + Y         K  S                        +     F     R 
Sbjct: 46  PEEMYHLGYYLYNNPAKKKGYSGTMSLV--------------REKPIDVSYGFENEEGRI 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + +   K + ++++  +     +  +          + +  L+           P
Sbjct: 92  -----LNLEFDKFYFINVYFPNAQHGLTRLDMKLDFDEKFLEYSNELRK--------KKP 138

Query: 205 FVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            +I GDFN     +                   D   K +D           K+    + 
Sbjct: 139 LIICGDFNVAHEEIDIARPKDNENNAGFTKQERDWMTKFLDSGYVDTYRIFMKEGGHYSW 198

Query: 249 KNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            + R           IDYFV+  +    + +    E +             SDH P++++
Sbjct: 199 WSYRFNARAKNIGWRIDYFVVSDDIRDRVKKAEILETVT-----------GSDHAPVTLE 247

Query: 302 YD 303
            D
Sbjct: 248 VD 249


>gi|167860654|gb|ACA05109.1| exodeoxyribonuclease III [Flammeovirga yaeyamensis]
          Length = 208

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 64/235 (27%), Gaps = 53/235 (22%)

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
           +       H    +    ++ +A+  K   +  +    +   D   R          +  
Sbjct: 1   FKDLGFKYHYWHSAEKKGYSGVAILSKVEAISTKIGMEIDTYDCEGR---------TILC 51

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
             +   +++ +  S    +  +           Q      ++I + KE+    V+ GDFN
Sbjct: 52  EFENFTLINTYFPSGTSGEERQ-------KFKYQFLDDYFEYIAKLKENYKNLVVCGDFN 104

Query: 213 RKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254
                                    +   K I+    +  F K  +S          +  
Sbjct: 105 ICHKAIDIHNPERNKNTSGFQPAEREWVSKFINEGGFIDAFRKFDESPGK-YSWWTYRAG 163

Query: 255 -------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    IDYF++ +     LI         +           SDHCPI I  
Sbjct: 164 ARKKNLGWRIDYFMVQKEMENTLISSQLHNEAVH-----------SDHCPIEIVL 207


>gi|74001679|ref|XP_857234.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit
           6-like isoform 1 isoform 3 [Canis familiaris]
          Length = 551

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/346 (11%), Positives = 90/346 (26%), Gaps = 70/346 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 181 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 240

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 241 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 300

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEIN--------GKKIW-----VLDIHLKSFCFL 170
           +       ++        +   V +++E++        GK I      +L +      + 
Sbjct: 301 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTAEGKPIHAADKQLLIVANAHMHWD 360

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY------- 217
               +       +   + + + +  + +        + +P V+  D N   +        
Sbjct: 361 PEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLS 420

Query: 218 ----LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRN 253
                 N+ DF +       +      K+                         N     
Sbjct: 421 NGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDF 480

Query: 254 KIPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           K  IDY    +   N    L       ++ N           SDH 
Sbjct: 481 KGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 526


>gi|271964214|ref|YP_003338410.1| endonuclease/exonuclease/phosphatase [Streptosporangium roseum DSM
           43021]
 gi|270507389|gb|ACZ85667.1| endonuclease/exonuclease/phosphatase [Streptosporangium roseum DSM
           43021]
          Length = 232

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/279 (10%), Positives = 67/279 (24%), Gaps = 54/279 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  +N+                     D   L +    +  D++ +QE   +    + 
Sbjct: 3   LRVAGYNVR----------------SMKDDVAALGRVISAVRPDVLCVQEAPRFLCWRRR 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +       +                   +             +        F     R
Sbjct: 47  RGQLAASGGLTVAAGRRLGGVAVLVGPRVRLL------------HGEGHLLRCFLGLEQR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +VE  G+++ V  +HL                 + L    + L            
Sbjct: 95  AVAIAVVETEGRRVAVASVHL------------DLDRGARLCHATEALTLLRAVADRFGA 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V+AGD N +     +++  W+ +  +     +P             R    ID     
Sbjct: 143 LPVLAGDINEQ-----SHEPAWRHLAGH-LTDCYPVSPRGDGLTFPARRPGKRIDAIFAA 196

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     +        +   +     +DH P+  + 
Sbjct: 197 AELPVLSCGVA--------EADPADLVAATDHLPVVAEL 227


>gi|50287091|ref|XP_445975.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525281|emb|CAG58894.1| unnamed protein product [Candida glabrata]
          Length = 436

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 90/333 (27%), Gaps = 70/333 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR----QYAKNL---------- 64
           S  Q+++ +++N   L       + K+   R  +    L        K+L          
Sbjct: 4   SEPQRIKFLTFNTWGL-----KYVSKHRRARLRALAEKLAGHQNSNIKSLPNSEDLYADN 58

Query: 65  ---DADIVFLQEMGSYNAVAKVFPK-----NTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
              D DIV LQE+        +  +       +  FYS           S   I +    
Sbjct: 59  DFEDYDIVALQEIWCKEDWDYIVEQCGKIFPYYRWFYSGILSGPGLAILSKIPIESTFLY 118

Query: 117 RKKN---VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           R         + +    +G   + +   NR       E     I +++ H+ +   L   
Sbjct: 119 RYPINGRPSAIHRGDWYVGKSIAITTLRNR-------ENPTTPIVIMNSHMHAPYSLTG- 170

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------- 223
               +      S QA          +E+    VI GD N +   L +N            
Sbjct: 171 ---DAAYSCHRSCQAWDFAKLAKIYREAGYAVVIVGDLNSRPGSLPHNILTKEAGLIDSW 227

Query: 224 -------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
                            +D             +   AN+       +DY ++D      +
Sbjct: 228 EQLHGKQDLEKIRTMNAMDQLVYACTTCDSTLNTWRANRRPDEACRLDYALVDPRRLTTI 287

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        ++       SDH   S   +
Sbjct: 288 KTG------IKFTELIDGVGSFSDHFAYSCTLE 314


>gi|68488901|ref|XP_711695.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans
           SC5314]
 gi|46433016|gb|EAK92473.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans
           SC5314]
          Length = 438

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 88/323 (27%), Gaps = 59/323 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-----LDADIVF 70
            +    Q ++L+++N   L         K   K        +     N      D DIV 
Sbjct: 12  ASEPKKQYIKLLTFNTWGL---------KFISKHRKERLRAIADALANPKCPDEDYDIVA 62

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+        +                   K    +    A+  +          +P+
Sbjct: 63  LQEIWCEEDWQYLDLVCRPRY-----PYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPI 117

Query: 131 LGAKDSFSRAGNRRAVELLVE------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            G   +F R        + V        +   I +L+ H+ +         +   +C   
Sbjct: 118 NGRPSAFFRGDFYVGKSIAVTMFQPHHPDILPIALLNSHMHAPYGSGDASYSTHRAC--- 174

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIR 236
             QA      +   K++    +  GD N K + L            D W  ++ ++ +  
Sbjct: 175 --QAWDFAKLVRMLKKAGYAVIQVGDLNSKPDSLPYKLFTVEGGLTDSWNVLNKDNVVPN 232

Query: 237 FPKEKDS------------RCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEIL 279
                 S                N    ++       +DY ++D      +   S     
Sbjct: 233 DQIATLSLEDQISLAGVTCNSRLNTWRESRPLWEACRLDYALID---ASNITPVSAQVK- 288

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
           + +          SDH   S+D 
Sbjct: 289 FVDKLPPPLSCSYSDHFAYSVDL 311


>gi|284035454|ref|YP_003385384.1| exodeoxyribonuclease III Xth [Spirosoma linguale DSM 74]
 gi|283814747|gb|ADB36585.1| exodeoxyribonuclease III Xth [Spirosoma linguale DSM 74]
          Length = 254

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 75/303 (24%), Gaps = 77/303 (25%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV-- 83
           L+S+NIN +                 +    L  +      DI+  QE+ +   V  +  
Sbjct: 3   LISYNINGIRA---------------AIRNGLLDWLAQNQFDILCFQEVKATTDVVDLSV 47

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F +  +   +       +          + +A   K           L   D   R    
Sbjct: 48  FEQLGYQYHWHAAEKKGY----------SGVATFSKIAPTNVVLGCGLPVYDCEGRI--- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + +L+ +  S    +  +           Q  Q L+           
Sbjct: 95  ------LRTDFGDLTLLNCYFPSGTTGEVRQGVKMEFLRDFYQFVQELRK-------ERP 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTI-------DPNDSLIRFPKEKDSRCNA-------NK 249
             ++ GD+N   N +  +D             +       F                   
Sbjct: 142 KVIVVGDYNIAHNAIDIHDPVRNKNTTGFLPEERAWMDSWFGSGMTDGFRYKHPTDVAYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDY  +  N    +I  +                   DHCP+ +
Sbjct: 202 WWSYRAGARTNNKGWRIDYASLTDNLRDRIIDCAM----------LPDAVHA-DHCPVCL 250

Query: 301 DYD 303
           + D
Sbjct: 251 NLD 253


>gi|15594879|ref|NP_212668.1| exodeoxyribonuclease III (exoA) [Borrelia burgdorferi B31]
 gi|195941668|ref|ZP_03087050.1| exodeoxyribonuclease III (exoA) [Borrelia burgdorferi 80a]
 gi|216264267|ref|ZP_03436259.1| exodeoxyribonuclease III [Borrelia burgdorferi 156a]
 gi|223888847|ref|ZP_03623438.1| exodeoxyribonuclease III [Borrelia burgdorferi 64b]
 gi|224532684|ref|ZP_03673301.1| exodeoxyribonuclease III [Borrelia burgdorferi WI91-23]
 gi|225548581|ref|ZP_03769628.1| exodeoxyribonuclease III [Borrelia burgdorferi 94a]
 gi|226321012|ref|ZP_03796557.1| exodeoxyribonuclease III [Borrelia burgdorferi 29805]
 gi|226321840|ref|ZP_03797366.1| exodeoxyribonuclease III [Borrelia burgdorferi Bol26]
 gi|2688454|gb|AAC66902.1| exodeoxyribonuclease III (exoA) [Borrelia burgdorferi B31]
 gi|215980740|gb|EEC21547.1| exodeoxyribonuclease III [Borrelia burgdorferi 156a]
 gi|223885663|gb|EEF56762.1| exodeoxyribonuclease III [Borrelia burgdorferi 64b]
 gi|224512302|gb|EEF82686.1| exodeoxyribonuclease III [Borrelia burgdorferi WI91-23]
 gi|225370611|gb|EEH00047.1| exodeoxyribonuclease III [Borrelia burgdorferi 94a]
 gi|226233029|gb|EEH31782.1| exodeoxyribonuclease III [Borrelia burgdorferi Bol26]
 gi|226233613|gb|EEH32349.1| exodeoxyribonuclease III [Borrelia burgdorferi 29805]
          Length = 255

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 83/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ K    DI+ +QE  +    + K
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVKEYTPDILCIQETKALREQLPK 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +    +       
Sbjct: 46  DLILENYYSYFSNSKIKGYSGVCIYSK---------------VEPISVRLLGEEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  V            +++ +  +   L           S +   A  L           
Sbjct: 91  RGLVAC-----YDDFILVNGYFPNSQVLRRRLGYKLDFLSYVENLADSL-------VCDG 138

Query: 203 VPFVIAGDFNRKI------------NYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNAN 248
              VI GDFN               +  G   +    +D   N   +   +  +      
Sbjct: 139 KNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETTWLDDFLNKGYVDTFRIFNKDPGYY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLILDKV-----------MGSDHCPVF 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEL 250


>gi|308497438|ref|XP_003110906.1| hypothetical protein CRE_04843 [Caenorhabditis remanei]
 gi|308242786|gb|EFO86738.1| hypothetical protein CRE_04843 [Caenorhabditis remanei]
          Length = 626

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/328 (10%), Positives = 81/328 (24%), Gaps = 49/328 (14%)

Query: 22  QKVRLVSWNI------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             VR++ +NI            N L         +    RT      ++ +  +    I 
Sbjct: 299 DVVRIMCYNILADLYLNLNLEQNELFFNYCPKANQRVFYRTPIFLKQMKDFI-DSQVSIF 357

Query: 70  FLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDS------NNDIHTAIAVRKKN 120
           FLQE+      N +        +    S +                   I++   +    
Sbjct: 358 FLQEVDLRRHENYIDPFLKTLNYSSEISKKGGQISEGVAVVFDQTRYRTIYSDSFLLADL 417

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRR------AVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           V   + +  +    +S + +  R          +++E     + ++  +           
Sbjct: 418 VEKEEVNSDIRRILESSAESETRFKTRPTIIQIVMLEDVETGVILVCGNTHLHHNPKDEH 477

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                + + + +  +   +    + E     +  GDFN   +         + +  +  +
Sbjct: 478 IKVLQALTCVRKLMKMFNEMKESEPERKCRLIFGGDFNSTPDGAVFQMMSNRFLPNDHKV 537

Query: 235 I------------------RFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQES 274
                                    +       +        +DY     +     I  S
Sbjct: 538 WECDEKIDAEDILIEKKMSCLTGTPEYTNYTASSQKEGFVGCLDYIW-GIDVESIRICPS 596

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +          SDH P+  D 
Sbjct: 597 PDHKKVIKYTALPSRISPSDHLPVICDI 624


>gi|315168004|gb|EFU12021.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1341]
          Length = 351

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLRQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|294779283|ref|ZP_06744687.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis PC1.1]
 gi|307269655|ref|ZP_07550989.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4248]
 gi|294453650|gb|EFG22048.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis PC1.1]
 gi|306514017|gb|EFM82606.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4248]
 gi|315031685|gb|EFT43617.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0017]
 gi|315034258|gb|EFT46190.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0027]
 gi|323480268|gb|ADX79707.1| endonuclease/Exonuclease/phosphatase family protein [Enterococcus
           faecalis 62]
 gi|329577503|gb|EGG58944.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1467]
          Length = 351

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             Q   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAQRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L + ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLAEVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|257415648|ref|ZP_05592642.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis
           AR01/DG]
 gi|257418618|ref|ZP_05595612.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257157476|gb|EEU87436.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis
           ARO1/DG]
 gi|257160446|gb|EEU90406.1| conserved hypothetical protein [Enterococcus faecalis T11]
          Length = 358

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 232

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 233 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADLPK 290

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 291 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 346

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 347 --------DHQPVKME 354


>gi|256957121|ref|ZP_05561292.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis DS5]
 gi|257077917|ref|ZP_05572278.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis JH1]
 gi|256947617|gb|EEU64249.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis DS5]
 gi|256985947|gb|EEU73249.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis JH1]
          Length = 358

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             Q   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 180 EAQRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 232

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L + ++Q+       +  GDFN+                    +   D   
Sbjct: 233 --KIAQSKKLAEVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 290

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 291 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 346

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 347 --------DHQPVKME 354


>gi|227517952|ref|ZP_03948001.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0104]
 gi|227074606|gb|EEI12569.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0104]
          Length = 351

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|29375609|ref|NP_814763.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis V583]
 gi|227555138|ref|ZP_03985185.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis HH22]
 gi|29343070|gb|AAO80833.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis V583]
 gi|227175722|gb|EEI56694.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis HH22]
 gi|315147980|gb|EFT91996.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4244]
 gi|315574226|gb|EFU86417.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0309B]
 gi|315581618|gb|EFU93809.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0309A]
 gi|327534616|gb|AEA93450.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis OG1RF]
          Length = 351

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 83/316 (26%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T + +  K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|145590186|ref|YP_001156783.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048592|gb|ABP35219.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 260

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 80/309 (25%), Gaps = 80/309 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +R++S N+N +           +VK+                AD + +QE+     +   
Sbjct: 2   LRIISANLNGIRSAVKKGFLPWAVKQ---------------KADFICMQELKAQRDDLED 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +   +    F+       +S                           L G  +    A 
Sbjct: 47  AILNPDGLHGFFHHAEKKGYSGCGIYTPHKP--------------DEVLYGYGNEEFDAE 92

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      VE   K + V+ +++ S       +                L       K S
Sbjct: 93  GRY-----VEARFKGLSVISVYMPSGSSSPERQEAKYRYLDSFLPHLIAL-------KNS 140

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
               V+ GD N   +                            D    +  + + +    
Sbjct: 141 GREIVLCGDVNIAHHEIDLKNWKGNLKNSGFLPEERAWLTNLFDQVGYVDVYRELEPKAT 200

Query: 246 NA-NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                   N+           IDY +   +      + +             + ++ SDH
Sbjct: 201 ETCYTWWSNRGQAYAKNVGWRIDYHISTPSIAASAKKTAV-----------YKDEKFSDH 249

Query: 296 CPISIDYDF 304
            P+++DYD+
Sbjct: 250 APLTVDYDW 258


>gi|241895249|ref|ZP_04782545.1| exodeoxyribonuclease III [Weissella paramesenteroides ATCC 33313]
 gi|241871555|gb|EER75306.1| exodeoxyribonuclease III [Weissella paramesenteroides ATCC 33313]
          Length = 289

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/315 (11%), Positives = 87/315 (27%), Gaps = 77/315 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75
             K++ +SWNI++++        +  +         + Q       D++ +QE       
Sbjct: 11  GGKMKFISWNIDSINAAVEHKSVRGVMTW------EVLQQIALEKPDVLAIQETKLKATG 64

Query: 76  ----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                  A+ ++FP     +  S           +    ++   +  ++  +   + P +
Sbjct: 65  LTKKQETALDELFPNYYRYLRMS-----------TGRSGYSGTMMLTRHEPISV-TMPEI 112

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           GA       G    + L  E N    +V  ++  +     +                Q L
Sbjct: 113 GAPGEMDIEGR--IITLEFENN----YVSTVYTPNSGSGLARLEDRQAWDDAYRAYVQTL 166

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIR 236
                   ++  P + +GDFN     +   +                 +  +        
Sbjct: 167 --------DATKPVIFSGDFNVAHQEIDLKNPKSNHKKAGFTNEEREHFSQLLDAGFTDI 218

Query: 237 FPKEKDSRCNANKNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
           F      +                  +   IDY++        + + S  +    +    
Sbjct: 219 FRYLHPDQAGVYTWWAQISKTSKINNSGWRIDYYLTSNRLADQVSELSVIDTGARQ---- 274

Query: 287 SRGKRLSDHCPISID 301
                  DH PI ++
Sbjct: 275 -------DHAPIKLE 282


>gi|301780562|ref|XP_002925696.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Ailuropoda
           melanoleuca]
 gi|281346608|gb|EFB22192.1| hypothetical protein PANDA_015236 [Ailuropoda melanoleuca]
          Length = 423

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 71/286 (24%), Gaps = 34/286 (11%)

Query: 34  LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY 93
           L       +   S  R       L  +      D+  L+E+ S      +  K +     
Sbjct: 11  LFNLNCWGIPYLSKHRAD-RMKRLGDFLNMESFDLALLEEVWSEQDFQYLRQKLS----- 64

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVEL 148
                   +    +  I + + +  K+       +                   +    L
Sbjct: 65  ---PTYPAAHYFRSGVIGSGLCIFSKHPIQEFTQHVYTLNGYPYMIHHGDWFCGKAVGLL 121

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
           ++ + G ++     HL +               +    QA  L  +I    +     ++ 
Sbjct: 122 VLRLGGLELNAYVTHLHA-----EYSRQKDIYLTHRVAQAWELAQFIHHTSKKADVVLLC 176

Query: 209 GDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANK-----------NLRNKIP 256
           GD N     LG      W  +       R  K  +  C                    I 
Sbjct: 177 GDLNLHPKDLGCRLLKEWTGLHDAYLETRDFKGSEEGCTMVPENCYVNQRELEPFPFGIR 236

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           IDY +  +    F I      +          G  LSDH  +    
Sbjct: 237 IDYVLY-KAVSGFYISC--KTLRTTTGRDPHSGTPLSDHEALMATL 279


>gi|227876386|ref|ZP_03994498.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269975950|ref|ZP_06182954.1| exodeoxyribonuclease III Xth [Mobiluncus mulieris 28-1]
 gi|306817278|ref|ZP_07451024.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239]
 gi|227842927|gb|EEJ53124.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269935778|gb|EEZ92308.1| exodeoxyribonuclease III Xth [Mobiluncus mulieris 28-1]
 gi|304649958|gb|EFM47237.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239]
          Length = 288

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/329 (10%), Positives = 83/329 (25%), Gaps = 91/329 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   S    +  +    + D++ +QE+    +    
Sbjct: 1   MRISTWNIN----------------SIRSRLPRVLDFLCRSNVDVLAMQEIKCRVS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---NVRVLQQSYPLLGAKDSFSRA 140
                            +    +  +    +A+  +   + +VL   +     +  F + 
Sbjct: 41  ------QFPVEAFLASGYQVFVNGLNQWNGVAIAVRADLDAQVLGTEFSGKIPQPPFGKP 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                  L V + G  I    +++ +   +D+    Y  +        + L+        
Sbjct: 95  PVVEPRALGVRVAG--IECWSLYVPNGREIDNPHFAYKLA------WLEALRSHAHTLLA 146

Query: 201 SLVPFV--IAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKE-- 240
           +    +    GDFN                     +   + F + +  +        +  
Sbjct: 147 ANPTALGLFMGDFNIAPCDEDVWDIQEFVGATHVSVPEREAFARLLQSDTLAQAVSLDET 206

Query: 241 ------------------KDSRCNANKNLRN---KIP------IDYFVMDQNAYKFLIQE 273
                                             +        ID+ +   N    +   
Sbjct: 207 AISRIGTDSTNCGGLVEVTRQFAPGWTYWDYQKARWRRNQGMKIDFALATPNLADKITGA 266

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       +  G++ SDH P+ ++ 
Sbjct: 267 FIG-------REERDGEKPSDHVPVVLEL 288


>gi|119945249|ref|YP_942929.1| endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
 gi|119863853|gb|ABM03330.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
          Length = 307

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 69/278 (24%), Gaps = 43/278 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRT-------------TSDYTLLRQYAKNLD----ADI 68
              WN+  L E+   +     +++                    L      ++     D+
Sbjct: 7   FAWWNVENLFEENNSANRPEWLQKKLNAELKGWGKAELQIKLQQLATVINAMNDGKGPDL 66

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + + E+ S   +  +               + H+       I  A    +    +     
Sbjct: 67  LGVCEVESSRVLLDLVRTLNQP---KRNYAVVHADNSDMRGIDVAFIYDRNLFEIETTLD 123

Query: 129 PLLGAKDSFSRA------GNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSP-S 180
                K+             R  V++  +   G    V+  H  S    +     Y   +
Sbjct: 124 DAGIVKNRVFHHVIQKQNATRDLVQVNFKTKQGNNFIVIGNHWPSRLGGEIDSEPYRMMA 183

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----------NYLGNNDDFWKTIDP 230
              LS     +K          +P ++ GDFN +           +    +         
Sbjct: 184 GETLSYFLDRIKK-----IRGEIPVLVMGDFNDQPFNRSLTSYTLSSNQISKVKSNRNKN 238

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                      D     +        +D  ++++ A K
Sbjct: 239 PYLYNMMWPLMDGTQGTHSYGGEWAMLDQILVNRGALK 276


>gi|329767436|ref|ZP_08258961.1| hypothetical protein HMPREF0428_00658 [Gemella haemolysans M341]
 gi|328836125|gb|EGF85816.1| hypothetical protein HMPREF0428_00658 [Gemella haemolysans M341]
          Length = 264

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 81/297 (27%), Gaps = 54/297 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76
           ++L++ N++  L E                   +L +       D+V +QE+        
Sbjct: 1   MKLLTINVHSWLEEN------------QLEKLNILAKTIVEKKYDVVAMQEVNQLINSAD 48

Query: 77  ------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                  +   K+                        +     +A+  K   V  + +  
Sbjct: 49  VYQGIKEDNFGKLLLDKIREYGEEGYSYYWTYSHIGFDKFEEGLAILAKGEVVAVEDF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             A+ + +   +R+ +++ +++N + +     H+          +               
Sbjct: 108 CTAQQTVTSIESRKILKVDLKVNDEIVEFYSCHMNLPTCKGEDIDQN------------- 154

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY--LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           L + I       +     GDFN    +          K +     L        +     
Sbjct: 155 LSNLINYTDNKNLKVF-MGDFNTDYFHQVDDYKRILDKGLYDTYELAEKKDGGVTVYKNI 213

Query: 249 KNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +    +DY  +++          F++  Y           +SDH  + +  
Sbjct: 214 SGWEDSMCQKKLDYVFINRKLDVKESFVIFNDENYPI---------ISDHNGLEVTL 261


>gi|227875870|ref|ZP_03993996.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269977505|ref|ZP_06184477.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1]
 gi|306819151|ref|ZP_07452865.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239]
 gi|227843618|gb|EEJ53801.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269934421|gb|EEZ90983.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1]
 gi|304648127|gb|EFM45438.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239]
          Length = 289

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 70/277 (25%), Gaps = 43/277 (15%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            +  N D+++  LQE+ +          + + +     R+   +         +A ++  
Sbjct: 21  DWLANDDSELYCLQEVRATVEDTVTLFGSAFDVRVWPCRIKGRAGVALVARRDSAFSLGG 80

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
               +    Y   G  D  S    R     +    G  + ++  +L S       +    
Sbjct: 81  TREGLPAALYDESGEPDVDS---GRWLEAEVSLPGGGSLTLVSAYLHSGELGSEKQEQKL 137

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------- 223
                 +++   L              ++ GDFN         +                
Sbjct: 138 AYLERATKRLSELAATARAAGAGAAQALVCGDFNIVRTERDIKNWKPNHNKVSGVMDEEI 197

Query: 224 ------FWKTIDPND--SLIRFPKEKDSRC-NANKNLRNK---------IPIDYFVMDQN 265
                    +++       +   +               +           IDY +    
Sbjct: 198 AILDTWMSDSLEGTAKHPAVDVTRALLGEVQGPYTWWSQRGKAFDNDAGWRIDYQMATPG 257

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 + S            S  +R SDH P+SI Y
Sbjct: 258 LATHAAEVSVW-------RAPSYAERWSDHAPLSITY 287


>gi|242813026|ref|XP_002486082.1| DNA lyase Apn2 [Talaromyces stipitatus ATCC 10500]
 gi|218714421|gb|EED13844.1| DNA lyase Apn2 [Talaromyces stipitatus ATCC 10500]
          Length = 642

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/330 (10%), Positives = 70/330 (21%), Gaps = 72/330 (21%)

Query: 32  NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTW 89
           + L + +              D          L+ADIV  QE  +   +    +     W
Sbjct: 22  HGLPDNDMERNPFGYQPW--RDNRSFNAMFDILEADIVIFQETKIQRKDLRDDMVLVPGW 79

Query: 90  CIFYS-TERLINHSKRDSNNDIHTAIAVR----------KKNVRVLQQSYPLLGAKDSFS 138
             ++S       +S         T   +R            N     +  P       + 
Sbjct: 80  DCYFSLPRHKKGYSGVVIYTRNETCTPIRAEEGITGLLCSPNSTTPYRHLPDDQQIGGYP 139

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--AQWLKDWIT 196
                  +++   +   +   + +   +F  L               +Q     L   I 
Sbjct: 140 SMEQLSDLQVDPAVLDCEGRCVILEFPAFVLLGLYCPAARDETRDDFRQGFINLLDARIR 199

Query: 197 QKKESLVPFVIAGDFNRKIN----------------------YLGNNDDFWKTIDPND-- 232
                    ++ GD N  +                              F + ++     
Sbjct: 200 NLVSMGKRVIVTGDLNISVGEIDSAHLTEAIRKGTGSEDEFVSSPVRRVFNQLVEGAKVV 259

Query: 233 -----------SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFLIQ 272
                                 R                     IDY +   +   +  +
Sbjct: 260 GQRDPAREVPVLHDICRSFHPGRRGMYTCWETRVNARPGNYGARIDYILSSLDMKDWWSE 319

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +              G   SDHCP+   +
Sbjct: 320 ANIQ-----------EGLMGSDHCPVYATF 338


>gi|199597303|ref|ZP_03210734.1| Exonuclease III [Lactobacillus rhamnosus HN001]
 gi|199591819|gb|EDY99894.1| Exonuclease III [Lactobacillus rhamnosus HN001]
          Length = 253

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 71/300 (23%), Gaps = 77/300 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N L                             LDAD   LQE        ++
Sbjct: 2   LKMISWNVNGLRAVLKKDFMT---------------IFNELDADWFCLQETKMQAGQVEL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  F             +    ++  A+  K+  +       +   D+  R    
Sbjct: 47  DLPGYYQYF-----------NYAERKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRI--- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +++ ++  +        +               L            
Sbjct: 93  ------ITLEYTKFYLMTVYTPNSGGELKRLDYRQQWDRDFLAYTNELAA--------KK 138

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P V  GD N     +   +D     +               N   I   +          
Sbjct: 139 PLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQLNSGFIDTFRHFYPDTVTYS 198

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDYFV                  Y +D         SDHCP+ +
Sbjct: 199 WWSYHFHARANNAGWRIDYFVASSAFQ-----------PYIQDAKILTQIMGSDHCPVEL 247


>gi|327461997|gb|EGF08326.1| RgfB protein [Streptococcus sanguinis SK1057]
          Length = 271

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 67/277 (24%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHRDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +N    ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREV--LVSEANDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E++G+ + +   HL  +      E                      +  +   P V+ 
Sbjct: 136 ETEVDGQLLTIASCHLSWWDKGFQGEWAKLE----------------EELLKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSTVVFDGKETPV---------VSDHFGLEV 267


>gi|254382637|ref|ZP_04997995.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. Mg1]
 gi|194341540|gb|EDX22506.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. Mg1]
          Length = 253

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 64/279 (22%), Gaps = 52/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+NI +L                  D   L +  +    D+VF+QE   +    K 
Sbjct: 22  IRVLSYNIRSL----------------RDDEDALARVIRACAPDLVFVQEAPRFFRWRKH 65

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +               +           + +      V +    LL       R   R
Sbjct: 66  AARLASKSELVVLSGGATAAG--------PLLLCSLRAFVERTEDVLLPMTPGLHR---R 114

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V     ++ VL  HL                      QA  L +          
Sbjct: 115 GFATAVVRFGAVRVGVLSAHLSLDPG-------------ERLAQAGLLLERTEAM--DTP 159

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             + AGDFN             +                   +      +   ID     
Sbjct: 160 YKIAAGDFNEPPEGPAFARVAARL------QDCRTVAPWGGEHTFTGGPSARRIDAVFAS 213

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +                      +  +  +DH P+    
Sbjct: 214 RGVEVL----GCGVPEGLPGVTPADLRAATDHLPVLAAL 248


>gi|124010283|ref|ZP_01694936.1| exodeoxyribonuclease III [Microscilla marina ATCC 23134]
 gi|123983668|gb|EAY24108.1| exodeoxyribonuclease III [Microscilla marina ATCC 23134]
          Length = 259

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 90/307 (29%), Gaps = 75/307 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++++S+N+N +                 +    L ++ K  D D++ +QE+ +       
Sbjct: 1   MKIISYNVNGIRA---------------AIRKGLVEWLKAADCDVLCIQELKALEEQVDT 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--VLQQSYPLLGAKDSFSR 139
                  + +++   +             ++ +A+  +     V+            +  
Sbjct: 46  AELEALGYHLYWQPAQT---------RKGYSGVAIFSRIKPNNVVYGYGDYDWHDTRWID 96

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      +  +     V+ +++ S                   +     + +IT+ K
Sbjct: 97  DEGRI-----IRADYDNFSVMSVYMPSGTKP--------ERVVFKMEWNLAFQQYITELK 143

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF------------WKTIDP--NDSLIRFPKEKDSRC 245
           + +   +I GD+N     +  ++                 +            +  +   
Sbjct: 144 KVVPHLIICGDYNIAHQAIDIHNPKSNAKRSGFLPEERNWLTDFMELGFTDSFRYLNPEP 203

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           IDY ++ ++  + L +        +           SDHC
Sbjct: 204 HNYTWWNVRTNARAKNLGWRIDYQMISKSLNENLKRAVILSEAMH-----------SDHC 252

Query: 297 PISIDYD 303
           PI I+ D
Sbjct: 253 PILIEVD 259


>gi|228943377|ref|ZP_04105825.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228976169|ref|ZP_04136658.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228783535|gb|EEM31625.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228816279|gb|EEM62456.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 326

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 81/314 (25%), Gaps = 56/314 (17%)

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-TERLINHSKR 104
           S +   S    ++    N++ D++  QE+ S +A+ ++  +  +  F +      + +  
Sbjct: 11  SSEAWESKKKWIKDQLLNMNCDVIGFQEVFSVDALRELIKEAGFTYFSTVEMPTTDPANN 70

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD---SFSRAGNRRAVELLVEING-KKIWVL 160
                   AI  +     V     P     D   +     +R  ++  + I     I   
Sbjct: 71  KVYTSPVVAIGSKYPITSVDPVIVPPFTRDDLPITHDFKFSRTPIKAKINIQDIGDIIFY 130

Query: 161 DIHLKSFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQKK---------- 199
             HLKS   +                  +         A  L+  +              
Sbjct: 131 VAHLKSKRPVMKTPDFIPNEAWDKIVLDTLRSRSQGHIASLLQRGLETTILYHEVTNVLQ 190

Query: 200 -ESLVPFVIAGDFNRKINYLGNNDDFWKTID---PNDSLIRFPKEKDSRCNAN------- 248
             + +P VI GD N   + +       +                +      +        
Sbjct: 191 THNRIPIVILGDLNDDEHSIPLEALTNRERVYEINGIPYNNLTLQAKQSIYSYTIYDAFD 250

Query: 249 --------------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-- 292
                            +    +DY ++     +    +      Y   D   +   +  
Sbjct: 251 LAPNPSGQKRIPTHYYNKLSNVLDYILVSNAFNERNPYKVGRITNYKVLDDHLKADGIKD 310

Query: 293 ---SDHCPISIDYD 303
              SDH  + I  +
Sbjct: 311 DKQSDHAQVVITIE 324


>gi|325687143|gb|EGD29166.1| RgfB protein [Streptococcus sanguinis SK72]
          Length = 271

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 68/277 (24%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLVERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +N    ++   L+   +  +    R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREV--LVSEANDPTDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E     +                +  +   P V+ 
Sbjct: 136 ETEVEGQLLTIASCHLSWWDKGFQGEWAKLEA----------------ELLKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|26344421|dbj|BAC35861.1| unnamed protein product [Mus musculus]
          Length = 419

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 76/287 (26%), Gaps = 33/287 (11%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           +  L+  +   L K+   R       L  +    + D+  L+E+ S      +  +    
Sbjct: 11  VFNLNCWDIPYLSKHRADR----MKRLGDFLNLENFDLALLEEVWSEQDFQYLRQR---- 62

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---RAGNRRAVE 147
              S      H  R         +  +     + Q  Y L G    F        +    
Sbjct: 63  --LSLTYPDAHYFRSGMIGSGLCVFSKHPIQEIFQHVYSLNGYPYMFHHGDWFCGKSVGL 120

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           L++ ++G  +     HL +               +    QA  L  +I    ++    ++
Sbjct: 121 LVLRLSGLVLNAYVTHLHA-----EYSRQKDIYFAHRVAQAWELAQFIHHTSKNADVVLL 175

Query: 208 AGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----------- 255
            GD N     LG      W  +          K  D  C                     
Sbjct: 176 CGDLNMHPKDLGCCLLKEWTGLHDAFVETEDFKGSDDGCTMVPKNCYVSQQDLGPFPSGI 235

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            IDY +  +   +F +      +           K  SDH  +    
Sbjct: 236 RIDYVLY-KAVSEFHVCC--ETLKTTTGCDPHSDKPFSDHEALMATL 279


>gi|301598721|pdb|3NGN|A Chain A, Crystal Structure Of The Human Cnot6l Nuclease Domain In
           Complex With Amp
 gi|301598722|pdb|3NGO|A Chain A, Crystal Structure Of The Human Cnot6l Nuclease Domain In
           Complex With Poly(A) Dna
          Length = 398

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 29  SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 88

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 89  YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 148

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 149 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 208

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 209 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 268

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 269 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 328

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 329 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 373


>gi|296130335|ref|YP_003637585.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109]
 gi|296022150|gb|ADG75386.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109]
          Length = 276

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 73/300 (24%), Gaps = 52/300 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           + + S N+N +                 +    + ++      D++ LQE+  S   +A 
Sbjct: 8   LTVASVNVNGIRA---------------AFRRGMGEWLDVRKPDVLLLQEVRGSDEILAD 52

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-AKDSFSRAG 141
             P + W + +             N      +A+  +      +     G   D+     
Sbjct: 53  HLPPDGWHLAH----------EAGNAKGRAGVAIASRLPMSAVRVGLGTGVTGDAGRWVE 102

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               V          + V+  +L S        +      + ++ +   +     +   +
Sbjct: 103 ADLEVPAEDGRPATTLTVVSAYLHSGTVGTPSMDEKYAFLAHVTDRLAAIAAAGGRAVVA 162

Query: 202 LVPFV---------IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
               +           G+  +            +  D                       
Sbjct: 163 GDLNIAHREVDIKNWKGNLTKAGFLPEERAYLDRWFDELGWRDLGRDLAGPGPGPYTWWS 222

Query: 253 NK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +           IDY              +        D   +   R SDH P+ ++YD
Sbjct: 223 WRGKAFDNDAGWRIDY-------QLATPALAALARTATVDRAATYDARFSDHAPLVVEYD 275


>gi|227538904|ref|ZP_03968953.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241413|gb|EEI91428.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 343

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/356 (9%), Positives = 79/356 (22%), Gaps = 66/356 (18%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M + ++L   FF V      ++ +R++ +NI                      +  +   
Sbjct: 1   MRKIFLLLQFFFTVAVWGQESKNLRVLQFNIWQEGTVVPGG------------FEAIANE 48

Query: 61  AKNLDADIVFLQEM-------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
              L  D++   E+        +   V  +  +      + +      S+    +     
Sbjct: 49  IARLKPDLIAFSEVRNYHDTKFNERIVEALAQRGLTYYSFFSNDSGLLSRYPLASYGRVG 108

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
              + K         P  G   +F  A             G                D++
Sbjct: 109 DDSKFKGTIHKAVVSPSEGKTIAFYTAHLEYTKGANYLPRGYHADTWAKLEAPIVDADAI 168

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND----------- 222
               + S    + Q     D   ++       ++ GDFN                     
Sbjct: 169 LANNNSSSRDEAIQI--FMDDAAKEISVGHEVILGGDFNEPSYLDWTARTKDKYDHKGLI 226

Query: 223 --DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--------------------PIDYF 260
                  +          ++       +                            ID+ 
Sbjct: 227 IPWTITKMLAEGGFQDAFRKVYPNEVTHPGFTFPSYNKDVEISKLVWGASADERDRIDFI 286

Query: 261 VMDQNAYKFLIQESFS------------EILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     ++ +                +  +  I       +DH  + ID+ +
Sbjct: 287 FYKSGQRLKPVKAAVVGPKESILRGEKTTEVSKDKFILPLAVWPTDHKALLIDFQW 342


>gi|134097038|ref|YP_001102699.1| endonuclease/exonuclease/phosphatase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291007021|ref|ZP_06564994.1| endonuclease/exonuclease/phosphatase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133909661|emb|CAL99773.1| endonuclease/exonuclease/phosphatase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 335

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 75/288 (26%), Gaps = 60/288 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P T      + ++S N+                    +D   + +  ++ D D++ LQE+
Sbjct: 104 PPTPVQGTPLNVMSANLYF----------------GEADAARIVELVRSNDVDVLSLQEL 147

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               A+A    +             +           T IA R     +           
Sbjct: 148 --TPALAAALDRAGLAQVL-----PHRVFEAHPGAEGTGIASRYPLRSLALVP------- 193

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R+   L+     + +  + +H       D++ +               +   
Sbjct: 194 ----PTTMRQPSALVDLPGSRDVEFVAVHPVIPVGSDTVGDWRRE-----------ITVL 238

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                E   P V+AGDFN  +++        +       +            A   L   
Sbjct: 239 PHTPAEGRPPRVLAGDFNATLDHSPLRGLLGRGYADAAEVAGAGLAPTWP-RAGAWLPPP 297

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + ID+ ++ +               Y   ++        DH  +    
Sbjct: 298 VTIDHVLVSE---------GVVVQDYRTFEVAGA-----DHRAVVAHL 331


>gi|115623641|ref|XP_779942.2| PREDICTED: similar to GA16037-PA isoform 1 [Strongylocentrotus
           purpuratus]
 gi|115959141|ref|XP_001177272.1| PREDICTED: similar to GA16037-PA [Strongylocentrotus purpuratus]
          Length = 577

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/343 (12%), Positives = 89/343 (25%), Gaps = 63/343 (18%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++S+N+  +  + ++  +               +     +  +DI+ LQE+ +    +
Sbjct: 208 FSVMSYNVLCDKYATKQIYAYCPTWALEWEYRRKGIMDEILSASSDIICLQEVETEQYYS 267

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL------ 131
              P      + S     + +K  S  D       AI  R     ++++           
Sbjct: 268 FFSPTLKQQGYDSVFSPKSRAKTMSEEDRKYVDGCAIFFRTSKFALVKEHLVEFNLLAMA 327

Query: 132 ---GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHLKS--------FCFLDSLENTYS 178
              G++D  +R   +    +  L+E              +           +        
Sbjct: 328 NAEGSEDMLNRVMTKDNIGLAALLETREGCYEAFQHEAANARQQLLVANVHIHWDPEYSD 387

Query: 179 PSCSLLSQQAQWLKDWITQKK--------ESLVPFVIAGDFNRKINY------------- 217
                       LK  I ++            +P V+ GD N   +              
Sbjct: 388 VKLIQTMMLMNELKKIIEEESVSFRPGGDSGTIPLVMCGDLNSLPDSGVVEYLEMSKVSV 447

Query: 218 -LGNNDDFWKTIDPNDSLIRFPKEKDSRC-------------NANKNLRNKIPIDYFVMD 263
              +  D    +  N S         S                 N     K  IDY    
Sbjct: 448 RHPDFKDLNYKVLRNFSSNSETNGHISHSFQLKRVYQNNPMRFTNYTYDFKGTIDYIFYS 507

Query: 264 QNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + A      L    F  I  ++          SDH  +  +++
Sbjct: 508 RQAMSVLGHLGPMDFEWIDTSKVHGCPNASIPSDHFSLLTEFE 550


>gi|312147931|gb|ADQ30590.1| exodeoxyribonuclease III [Borrelia burgdorferi JD1]
          Length = 255

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 82/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ K    DI+ +QE  +    + K
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVKEYTPDILCIQETKALREQLPK 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +    +       
Sbjct: 46  DLIFENYYSYFSNSKIKGYSGVCIYSK---------------VEPISVRLLGEEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  V            +++ +  +                       ++++         
Sbjct: 91  RGLVAC-----YDDFILVNGYFPNSQV-------LRRRLGYKLNFLSYVENLADSLVCDG 138

Query: 203 VPFVIAGDFNRKI------------NYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNAN 248
              VI GDFN               +  G   +    +D   N   +   +  +      
Sbjct: 139 KNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETTWLDDFLNKGYVDTFRIFNKDPGYY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLILDKV-----------MGSDHCPVF 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEL 250


>gi|21654885|gb|AAK85707.1| CCR4 [Mus musculus]
          Length = 557

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 93/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+     + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 189 FSVMCYNVLGDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 489 IIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 539


>gi|74008844|ref|XP_549370.2| PREDICTED: similar to Deoxyribonuclease I-like 1 precursor (DNase
           I-like 1) (Muscle-specific DNase I-like) (DNase X) (XIB)
           isoform 1 [Canis familiaris]
          Length = 295

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 72/304 (23%), Gaps = 33/304 (10%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M    VL L+          A+  R+ ++N   L+          S         +  + 
Sbjct: 1   MHYPAVLLLLL------PGGAEAFRICAFNAQRLTL---------SKVAREHVMDIFVRI 45

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 DI+ LQE+   +  A          F ++     +S   S          +   
Sbjct: 46  LARC--DIMVLQEVVDSSGSAISLLLRELNRFDNS---GFYSFLSSPLLGRNTYMEKYVY 100

Query: 121 VRVLQQSYPLLGAKDSF-SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +    ++  L             R           K +  L +                 
Sbjct: 101 IYRSHKTQVLDSYVYEDKDDLFAREPFVAQFTFPSKVLPSLVLVPLHTTP--------KA 152

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
               L+       D   + +      ++ GDFN     L         +           
Sbjct: 153 VEKELNALYDVFLDVSQRWQSKD--MILLGDFNADCASLNKKRLAELALRTEAGFRWVIA 210

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           + +              I   +  +     L   +      +    +     +SDH P+ 
Sbjct: 211 DGEDTTVRASTHCAYDRI--VLHGERCQSLLSSAAAFNFPRSFRLNEEEALNISDHYPVE 268

Query: 300 IDYD 303
           ++  
Sbjct: 269 VELS 272


>gi|290958905|ref|YP_003490087.1| integral membrane protein [Streptomyces scabiei 87.22]
 gi|260648431|emb|CBG71542.1| putative integral membrane protein [Streptomyces scabiei 87.22]
          Length = 364

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 81/296 (27%), Gaps = 63/296 (21%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74
            T  V  +VR+++ N+      +                  L +  +    DIVF++E  
Sbjct: 117 PTGPVLAEVRVMTSNVEFGQGTD-----------------ALIKAVRRDHPDIVFVEECE 159

Query: 75  --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                    ++  +               + +    ++           +  +       
Sbjct: 160 LTCSATLRDTFGYLDDRNGGTGGTGGAKKKPVEYPYRQSIEGYGPAGSVILSRYPLTSAA 219

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             P                   + +I G+ + +   H       +              +
Sbjct: 220 PVPGSMGMPG-----------AIADIEGRPVRLQLAHPMPPLPGE---------LDTWRR 259

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           +   L+ W    K+S  P ++AGDFN   ++          +     L    +++     
Sbjct: 260 ELDALRAWAA--KDSKTPAILAGDFNASQDHAAFRAVLDTGLSDAARLTG--QDRRPTWP 315

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    R    ID+ ++    +      S   I + +           DH  +++D 
Sbjct: 316 SRTTPRFGAQIDHVLVSHEDF------SARGIRFLKLSGT-------DHEAVTVDL 358


>gi|164655745|ref|XP_001729001.1| hypothetical protein MGL_3789 [Malassezia globosa CBS 7966]
 gi|159102890|gb|EDP41787.1| hypothetical protein MGL_3789 [Malassezia globosa CBS 7966]
          Length = 473

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 79/297 (26%), Gaps = 30/297 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+++ N   L         +   K        +     +   D++ LQE+     V  
Sbjct: 66  ELRVLTLNCWGL---------RFFSKLRKERLAAISDRLADTHYDVIALQEI----WVRI 112

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    F +T+                AI  R   V +    + L G          
Sbjct: 113 AGLAAHARSFVATDIPYGKFFLTGAFGSGLAIMTRYPIVSMETHMFRLTGTPIYVQEGDW 172

Query: 143 RRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   + +   ++ ++D++   F                 + +A  L    T   ++
Sbjct: 173 IAGKACGRITMAHPQLGLVDVYTSHFTAHGGQSGPEIQRV-YRTTEAFELAQKCTASAQA 231

Query: 202 LVPFVIAGDFNRKINYL--------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA------ 247
               +  GD N   + L        G   D    +   DS      +      +      
Sbjct: 232 GRHVLCMGDLNSLPSSLCMALLQSVGGLQDALAHVHNGDSGADITCDSPKNTWSKNKKID 291

Query: 248 -NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     +DY +    A +       S  +   D I S     SDH  + + + 
Sbjct: 292 QYAQQHGGKCLDYVLYRGPANRMSRLSYSSHEVTFTDLIDSLQVSYSDHFGLEVVFS 348


>gi|255326905|ref|ZP_05367981.1| endonuclease/exonuclease/phosphatase family protein [Rothia
           mucilaginosa ATCC 25296]
 gi|255296122|gb|EET75463.1| endonuclease/exonuclease/phosphatase family protein [Rothia
           mucilaginosa ATCC 25296]
          Length = 292

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 72/278 (25%), Gaps = 46/278 (16%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY------------------ 93
           +    L ++      D++ LQE+    +   V     +                      
Sbjct: 18  AKIRTLAKFIIEQQVDVIALQEVNQLTSTPVVKEPLNYRGGAGVPVHEDNYALLLVQALN 77

Query: 94  ---STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150
              +T            +     +A+  +      +    +  +  + +   R A   L+
Sbjct: 78  EMGATYEWTLTEAHIGWDRYDECVAILSRLPIRGIKPI-DMSPEYGYHQVQRRAAQAALI 136

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
           E      W    H+  + F             L +Q+   L   + +      P ++ GD
Sbjct: 137 ETETGTFWCATTHMSWWDFDGEP---------LFAQEYTRLSQALAECAL-TAPVLLGGD 186

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQN 265
           FN   +          +    D+               +    +       ID+   D+ 
Sbjct: 187 FNSAAHLSDEGYALVTSSGMVDTRSLAEHTDGENTVHREIAGWEGNTDAKRIDFVFADRL 246

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    F +            + +SDH  + ++ D
Sbjct: 247 LTVNSHAVVFRDNSP---------EAISDHSGLLLEID 275


>gi|6678031|ref|NP_033239.1| sphingomyelin phosphodiesterase 2 [Mus musculus]
 gi|20138887|sp|O70572|NSMA_MOUSE RecName: Full=Sphingomyelin phosphodiesterase 2; AltName:
           Full=Lyso-platelet-activating factor-phospholipase C;
           Short=Lyso-PAF-PLC; AltName: Full=Neutral
           sphingomyelinase; Short=N-SMase; Short=nSMase
 gi|3021480|emb|CAA10994.1| neutral Sphingomyelinase [Mus musculus]
 gi|15012139|gb|AAH10978.1| Sphingomyelin phosphodiesterase 2, neutral [Mus musculus]
 gi|148673028|gb|EDL04975.1| sphingomyelin phosphodiesterase 2, neutral, isoform CRA_b [Mus
           musculus]
          Length = 419

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 76/287 (26%), Gaps = 33/287 (11%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           +  L+  +   L K+   R       L  +    + D+  L+E+ S      +  +    
Sbjct: 11  VFNLNCWDIPYLSKHRADR----MKRLGDFLNLENFDLALLEEVWSEQDFQYLRQR---- 62

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS---RAGNRRAVE 147
              S      H  R         +  +     + Q  Y L G    F        +    
Sbjct: 63  --LSLTYPDAHYFRSGMIGSGLCVFSKHPIQEIFQHVYSLNGYPYMFHHGDWFCGKSVGL 120

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           L++ ++G  +     HL +               +    QA  L  +I    ++    ++
Sbjct: 121 LVLRLSGLVLNAYVTHLHA-----EYSRQKDIYFAHRVAQAWELAQFIHHTSKNADVVLL 175

Query: 208 AGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----------- 255
            GD N     LG      W  +          K  D  C                     
Sbjct: 176 CGDLNMHPKDLGCCLLKEWTGLHDAFVETEDFKGSDDGCTMVPKNCYVSQQDLGPFPSGI 235

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            IDY +  +   +F +      +           K  SDH  +    
Sbjct: 236 RIDYVLY-KAVSEFHVCC--ETLKTTTGCDPHSDKPFSDHEALMATL 279


>gi|325529413|gb|EGD06334.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. TJI49]
          Length = 269

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 70/309 (22%), Gaps = 74/309 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S+N                       + L       L  D+  +QE    +A    
Sbjct: 3   ISVLSYNTLFAGMDGSD----------DRRFELQIGLIDALRPDVFLMQEAKGLDA---- 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   +     +            + AI +R     +  +        D+       
Sbjct: 49  NGHARLHEWERRLSMRGFLGVAPRTGQNVAIFIRAPLRALSFEV-------DNTHFHHAM 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +++ V      I  +  HL                     +QA+    ++T       
Sbjct: 102 AMLKVEVPGGAAPITFVSTHLCPNGP--------------QIRQAEA--AYLTALAAPDA 145

Query: 204 PFVIAGDFN-RKINYLGNNDD----------------------FWKTIDPNDSLIRFPKE 240
             +I GDFN    +     D                           +D    +    + 
Sbjct: 146 LTLIGGDFNSASPHDPEPADWGGLAPHHRARYLAEDLSGIDRSVIARLDAAGLVDLGRRL 205

Query: 241 KDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             S          +         DY    +   +   +                 +R SD
Sbjct: 206 HGSGIPTVPAAGYREAEFATMRCDYLFASKALVERARRYEVLRTP--------ETERASD 257

Query: 295 HCPISIDYD 303
           H P+ +  D
Sbjct: 258 HYPVLLQLD 266


>gi|251781115|ref|ZP_04824035.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243085430|gb|EES51320.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 262

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 77/268 (28%), Gaps = 40/268 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCI--------FYSTERLIN 100
                L +     D D + LQE+    + N +      + + +        + +      
Sbjct: 18  DKIKYLAKTIAENDYDAIALQEVSQSINSNVIKSNLKYDNFAVLLKSELDKYNTNYNFFW 77

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                        +A+  K+  V ++S+ +  A D       RR V+L  E N + I + 
Sbjct: 78  DFSHIGYEKYEEGLAIFTKHNIVDEKSFFISKANDIEYWK-TRRIVKLTFEYNNENIDIY 136

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             HL            +         Q + L +    +  S       GDFN        
Sbjct: 137 SCHLGW----------WEDQEEPFKCQVKKLLE----ENTSNNTTFFMGDFNNNAFIRNE 182

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275
             D+       D+     +  +      K            +D  + ++       +  F
Sbjct: 183 GYDYLLNKGLIDTFTISKEADNGITVRGKIDGWDENKEKLRLDLILSNKKLDVLTSKVIF 242

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + I  +          +SDH  + +  +
Sbjct: 243 NGINKDI---------ISDHYGVEVSLN 261


>gi|74316272|ref|YP_314012.1| DNA-(apurinic or apyrimidinic site) lyase [Thiobacillus
           denitrificans ATCC 25259]
 gi|74055767|gb|AAZ96207.1| DNA-(apurinic or apyrimidinic site) lyase [Thiobacillus
           denitrificans ATCC 25259]
          Length = 259

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 82/306 (26%), Gaps = 76/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +        +                +     AD+V +QE+ +      +
Sbjct: 1   MRIISANLNGIRSAATKGFF---------------DWLPTQGADVVCVQELKAQA--TDL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+   C   S        K  S   ++T  A ++    V     P   A+  +      
Sbjct: 44  KPEVRQCDGLSGAFHCAEKKGYSGVGVYTRQAPQR---IVEGLGLPEFDAEGRY------ 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E +   + V+ ++  S    +  +              + L        +   
Sbjct: 95  ------IEADYGDLAVISLYQPSGSSSEERQQAKFRFLDAFFPHLEKL-------VKCGR 141

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN- 246
             +I GD+N                             +  D    +  +     +    
Sbjct: 142 EIIICGDWNIAHQEIDLKNWKSNQKNSGFLPEERAWMTRLFDELGWVDVYRSLYPAHTGE 201

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A     N+           IDY +                          + +R SDH P
Sbjct: 202 AYTWWSNRGQAWAKNVGWRIDYQIATPGIAAKARSAFV-----------YKEQRFSDHAP 250

Query: 298 ISIDYD 303
           + +DYD
Sbjct: 251 LVVDYD 256


>gi|149370979|ref|ZP_01890574.1| exodeoxyribonuclease III [unidentified eubacterium SCB49]
 gi|149355765|gb|EDM44323.1| exodeoxyribonuclease III [unidentified eubacterium SCB49]
          Length = 276

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 91/308 (29%), Gaps = 81/308 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++S+N+N +                 +    +  +    DAD+V +QE  +      
Sbjct: 20  PMKILSYNVNGIRA---------------AMRKEMLTWLTQTDADVVCIQETKANQDQVD 64

Query: 83  ----VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               V     +  ++S +              ++ +A+  KN      ++   G      
Sbjct: 65  TDAIVAAGYPYHYWFSAQ-----------KKGYSGVAIFCKNEP----NHIEYGTGIESM 109

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R      + ++   + ++ ++L S           S       +     +D++ + 
Sbjct: 110 DFEGRN-----IRVDYDGVSIMSLYLPSGT--------NSARLDHKLEYMALFQDYVNEL 156

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSR 244
           K+ +   VI GD+N     +  ++                      +   I   +  +  
Sbjct: 157 KKEIPNLVICGDYNICHEAIDIHNPVSNKNSSGFLPVEREWLGNFIDSGFIDSFRFLNKE 216

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +       +           IDY ++     + + +        +           SDH
Sbjct: 217 PDNYTWWSYRANARANNKGWRIDYNMVATPLKEKIKRAVILPAAVH-----------SDH 265

Query: 296 CPISIDYD 303
           CP  ++ D
Sbjct: 266 CPHMVELD 273


>gi|325696374|gb|EGD38265.1| RgfB protein [Streptococcus sanguinis SK160]
          Length = 271

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 67/277 (24%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNELAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIAIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +N    ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREV--LVSEVNDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E     +                +  +   P V+ 
Sbjct: 136 ETEVEGQLLTIASCHLSWWDKGFQGEWAKLEA----------------ELLKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|301598724|pdb|3NGQ|A Chain A, Crystal Structure Of The Human Cnot6l Nuclease Domain
          Length = 398

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 29  SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 88

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 89  YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 148

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 149 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 208

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 209 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 268

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 269 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 328

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 329 GVIDYIFYSKTHMNVEGVLGPLDPQWLVENNITGCPHPHIPSDHF 373


>gi|327274248|ref|XP_003221890.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Anolis
           carolinensis]
          Length = 656

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/352 (11%), Positives = 97/352 (27%), Gaps = 69/352 (19%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 287 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ 346

Query: 79  AVAKVFPKNT---WCIFYSTERLIN-HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                 P      +  F+S +      S+++  +    AI  + +   ++Q+        
Sbjct: 347 YFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 406

Query: 135 DSFSRAGNRRAV-----------ELLVEINGKKI------------WVLDIHLKSFCFLD 171
              +  G+   +            +++E++ +               +L +      +  
Sbjct: 407 AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGLKPLHTLDNQLLIVANAHMHWDP 466

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLV------PFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +  S        P V+  D N   +         
Sbjct: 467 EYSDVKLVQTMMFVSELKSILEKASGRPGSPTADTNSIPLVLCADLNSLPDSGVVEYLSN 526

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +    +  +      K+                         N     K
Sbjct: 527 GIVADNHKDFKELRYNDCLVNFSGNGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFK 586

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             IDY        N    L       ++ N           SDH  +    +
Sbjct: 587 GVIDYIFYSNTHMNVLGVLGPLDPQWLVENSITGCPHPHIPSDHFSLLTQLE 638


>gi|261349310|gb|ACX71215.1| surface-anchored DNA nuclease [Streptococcus suis]
          Length = 183

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 48/173 (27%), Gaps = 15/173 (8%)

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS----PSCSLLSQQA 188
              + + A  R+ +       G+K+ VL  HL S    + L          S       A
Sbjct: 20  DPTNLAWAAVRKTLAAEFVFKGEKVVVLANHLNSKRGDNGLYGKIQPVSFKSEEKRHILA 79

Query: 189 QWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           Q + D+      +      V+ GDFN               ++         +   S   
Sbjct: 80  QTIADFTKAGLAQNPNANIVMLGDFNDYEFTKTIE-----ILETGGMANLVSRHDASDRF 134

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +     N   +D  ++  N       +                 R SDH P+ 
Sbjct: 135 SYFYNGNNQSLDNMLVSTNLLDRYAFDMVHVNSA----FMEEHGRASDHDPLL 183


>gi|258539213|ref|YP_003173712.1| exodeoxyribonuclease III [Lactobacillus rhamnosus Lc 705]
 gi|257150889|emb|CAR89861.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus Lc 705]
          Length = 252

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 72/300 (24%), Gaps = 77/300 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+N L                             LDAD   LQE        ++
Sbjct: 1   MKMISWNVNGLRAVLKKDFMT---------------IFNELDADWFCLQETKMQAGQVEL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  F             +    ++  A+  K+  +       +   D+  R    
Sbjct: 46  DLPGYYQYF-----------NYAERKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRI--- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +   K +++ ++  +        +               L            
Sbjct: 92  ------ITLEYPKFYLMTVYTPNSGGELKRLDYRQQWDRDFLAYTNELAA--------KK 137

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
           P V  GD N     +   +D     +               N   I   +          
Sbjct: 138 PLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQLNSGFIDTFRHFYPDTVTYS 197

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           IDYFV                  Y +D         SDHCP+ +
Sbjct: 198 WWSYRFHARANNAGWRIDYFVASSAFQ-----------PYIQDAKILTQIMGSDHCPVEL 246


>gi|77917626|ref|YP_355441.1| hypothetical protein Pcar_0008 [Pelobacter carbinolicus DSM 2380]
 gi|77543709|gb|ABA87271.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 244

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 69/284 (24%), Gaps = 72/284 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R++++NI+     +G            +D   + +       D+V LQE+        
Sbjct: 3   TIRIMTYNIHGCRGTDG-----------RTDPARILEVISRAGPDMVALQEVAGS----- 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               +          +  +             A          +   L G          
Sbjct: 47  -LDNDQAAWLGQRLAMNYYGPDSPG-----GNAFLSYYPMRAMRYLDLEGGS-------- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES- 201
              +   + I G+ + + +I L                     +Q   L D         
Sbjct: 93  --CLCADINIAGRCLHIFNIRLH-------------EHFRQRRRQWVRLFDPQDGVGSHS 137

Query: 202 -LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPI 257
              P ++ GDF      L            + S+    +   S   ++            
Sbjct: 138 TGCPVMLLGDFGDGPWSL-----------RHGSIAPALRLAKSPFWSSTFPSWLPLCSR- 185

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           D   +               I+ +     +  +R S H P+   
Sbjct: 186 DRAYLGGQLR----------IVDSRIYRYATARRASTHLPLLFT 219


>gi|83816161|ref|YP_446950.1| endonuclease/exonuclease/phosphatase family protein [Salinibacter
           ruber DSM 13855]
 gi|83757555|gb|ABC45668.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber DSM
           13855]
          Length = 270

 Score = 66.5 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 71/303 (23%), Gaps = 67/303 (22%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N+   +   G                   +  + +D D+V LQE+ S   +  +  +
Sbjct: 1   MTYNVLYATPDTGT-----------------VRAIEAVDPDVVALQEI-SEPRLRHIADE 42

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             +   +S E   N           T +  R        +                R A 
Sbjct: 43  LDYYFHHSDEHEANE--------EDTGLLSRYPI----SRPTRYGALLYLTVDDPIRIA- 89

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWITQKKESLV 203
                     + +     + +   D           +    S + + + D +++  +  V
Sbjct: 90  ---------NVHLSPYPYEPYALRDDEMTPREAVAQARKTRSPEIKPVLDALSKSVQEDV 140

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK--------------------DS 243
           P  + GDFN   +           +     +                             
Sbjct: 141 PTFLMGDFNEPSHLDWTPAAAEAGLHLGLEVPWPTSRAVTERGFRDAFRVAHPDEVKRPG 200

Query: 244 RCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           ID+  +   +       +      +  D    G   SDH  +  
Sbjct: 201 YTWTTLTGDPDEVHDRIDFIYVAGASVSVETAYTVGLRDASPTDRSVSGY-PSDHRSVVT 259

Query: 301 DYD 303
              
Sbjct: 260 TVS 262


>gi|325917542|ref|ZP_08179745.1| exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
 gi|325536258|gb|EGD08051.1| exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
          Length = 266

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 86/313 (27%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +                +    DAD++ +QE  +       
Sbjct: 1   MRIISFNANGLRSAASKGFF---------------DWFATQDADVLCIQETKAQE----- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +         +  S    ++ +A+  K      ++       D   R    
Sbjct: 41  --HQLAGPEFLPAGYKAWFRDASTKKGYSGVAIYAKQAPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  ++          Q  +WL+  + +   S  
Sbjct: 96  ------IEARFGNLSVVSFYIPSGSSGELRQDYK-------FQVMEWLRPILDEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN------DSLIRFPKEKDSRCNA---------- 247
            +V+ GD+N     L   +      +        D L     +  S  +           
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADTASDASPADGRGWVDSY 202

Query: 248 ---------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       L   +             R 
Sbjct: 203 RVLHPQGEDYTWWSNRGAARANNVGWRIDYQLVTPGLRDALQACTI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 QRFSDHAPYIVDY 264


>gi|72393161|ref|XP_847381.1| apurinic/apyrimidinic endonuclease [Trypanosoma brucei TREU927]
 gi|62175708|gb|AAX69838.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma brucei]
 gi|70803411|gb|AAZ13315.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
          Length = 396

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/321 (10%), Positives = 77/321 (23%), Gaps = 69/321 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ ++WN+  L                  D   +++  +    D + LQE  +   +   
Sbjct: 93  LKFITWNVAGLRGL------------LKKDSEAIKKLLEEEHPDALCLQETKLNVGDKGN 140

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +         F             +   I   +A +   V V     P     D      
Sbjct: 141 EALGVVQGYDFVDHPCHAKKGYSGTRTYIKKEVAEKWNAVFVKGFGGPNGVDDDKQENGD 200

Query: 142 NRRAVELLVEINGK------KIWVLDIHLKSFCFLDSL-ENTYSPSCSLLSQQAQWLKDW 194
           +   V        +      ++ +++ ++ +     +     +      +      L   
Sbjct: 201 DEGRVLTTYFGGDQGCENTFRLALVNTYVPNSGMDLARLPYRHKTFDVKMRNYLCKLDAA 260

Query: 195 IT---------QKKESLVPFVIAGDFNR-------------------KINYLGNNDDFWK 226
                      +  +     + AGD N                              F +
Sbjct: 261 AMKVNGTCNNVKDAQPPTGVIWAGDLNVAERDYDRYFAGTFAAMQKCSGFTPEERTSFRE 320

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSE 277
           T+   +++  F +              +           +DYFV+       ++      
Sbjct: 321 TLRAVNAVDTFRELYPRAAPVYTFWSARINGRARGLGWRLDYFVVSAALAGRVVDC---- 376

Query: 278 ILYNEDDIKSRGKRLSDHCPI 298
                          SDHCP+
Sbjct: 377 -------FTMPMIMGSDHCPV 390


>gi|58036733|emb|CAF21852.1| AP endonuclease 1 homologue [Trypanosoma brucei brucei]
 gi|261330625|emb|CBH13610.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 396

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/321 (10%), Positives = 77/321 (23%), Gaps = 69/321 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++ ++WN+  L                  D   +++  +    D + LQE  +   +   
Sbjct: 93  LKFITWNVAGLRGL------------LKKDSEAIKKLLEEEHPDALCLQETKLNVGDKGN 140

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +         F             +   I   +A +   V V     P     D      
Sbjct: 141 EALGVVQGYDFVDHPCHAKKGYSGTRTYIKKEVAEKWNAVFVKGFGGPNGVDDDKQENGD 200

Query: 142 NRRAVELLVEINGK------KIWVLDIHLKSFCFLDSL-ENTYSPSCSLLSQQAQWLKDW 194
           +   V        +      ++ +++ ++ +     +     +      +      L   
Sbjct: 201 DEGRVLTTYFGGDQGCENTFRLALVNTYVPNSGMDLARLPYRHKTFDVKMRNYLCKLDAA 260

Query: 195 IT---------QKKESLVPFVIAGDFNR-------------------KINYLGNNDDFWK 226
                      +  +     + AGD N                              F +
Sbjct: 261 AMKANGTCNNVKDAQPPTGVIWAGDLNVAERDYDRYFAGTFAAMQKCSGFTPEERTSFRE 320

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSE 277
           T+   +++  F +              +           +DYFV+       ++      
Sbjct: 321 TLRAVNAVDTFRELYPRAAPVYTFWSARINGRARGLGWRLDYFVVSAALAGRVVDC---- 376

Query: 278 ILYNEDDIKSRGKRLSDHCPI 298
                          SDHCP+
Sbjct: 377 -------FTMPMIMGSDHCPV 390


>gi|73970323|ref|XP_856050.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 6
           isoform 2 [Canis familiaris]
          Length = 382

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 14  FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 73

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 74  FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 133

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 134 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 193

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 194 SDVKLVQTMMFLSEVKNIIDKASRNLQSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 253

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 254 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFDFKG 313

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 314 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 364


>gi|307700400|ref|ZP_07637439.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16]
 gi|307614385|gb|EFN93615.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16]
          Length = 288

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/329 (10%), Positives = 84/329 (25%), Gaps = 91/329 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WNIN                   S    + ++    + D++ +QE+    +    
Sbjct: 1   MRISTWNIN----------------SIRSRLPRVLKFLCRSNVDVLAMQEIKCRVS---- 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---NVRVLQQSYPLLGAKDSFSRA 140
                            +    +  +    +A+  +   + +VL   +     +  F + 
Sbjct: 41  ------QFPVEAFLASGYQVFVNGLNQWNGVAIAVRADLDAQVLGTEFSGKIPQPPFGKP 94

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                  L V + G  I    +++ +   +D+    Y  +        + L+        
Sbjct: 95  PVVEPRALGVRVAG--IECWSLYVPNGREIDNPHFAYKLA------WLEALRSHAHTLLA 146

Query: 201 SLVPFV--IAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKE-- 240
           +    +    GDFN                     +   + F + +  +        +  
Sbjct: 147 ANPTALGLFMGDFNIAPCDEDVWDIQEFVGATHVSVPEREAFARLLQSDTLAQAVSLDET 206

Query: 241 ------------------KDSRCNANKNLRN---KIP------IDYFVMDQNAYKFLIQE 273
                                             +        ID+ +   N    +   
Sbjct: 207 AISRIRTDSTNCGGLVEVTRQFAPGWTYWDYQKARWRRNQGMKIDFALATPNLADKITGA 266

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       +  G++ SDH P+ ++ 
Sbjct: 267 FIG-------REERDGEKPSDHVPVVLEL 288


>gi|294852706|ref|ZP_06793379.1| endonuclease/exonuclease/phosphatase [Brucella sp. NVSL 07-0026]
 gi|294821295|gb|EFG38294.1| endonuclease/exonuclease/phosphatase [Brucella sp. NVSL 07-0026]
          Length = 275

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 59/209 (28%), Gaps = 40/209 (19%)

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +   R   R  + + + I G+ + +   HLKS     + ++  + S  +   +A+ ++  
Sbjct: 65  EPHDRIFKRDCLNVDLRIGGEPLSLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRI 124

Query: 195 ITQKKE----SLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSL 234
           I +K      +   ++I GDFN                     +         +    ++
Sbjct: 125 IEEKFGIDRVTERRWLICGDFNDYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAV 184

Query: 235 IRFPKEKDSRCNA-NKNLRNKIP----IDYFVMDQNAY---------------KFLIQES 274
               +                      +DY +                      +     
Sbjct: 185 NLVERRPVMDRWTLYHTRGPLERHLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFP 244

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +           + SDHCP+S+  +
Sbjct: 245 PEQNVDRYPRTGWDRPKASDHCPVSVTLN 273


>gi|261884462|ref|ZP_06008501.1| endonuclease/exonuclease/phosphatase, putative [Campylobacter fetus
           subsp. venerealis str. Azul-94]
          Length = 245

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 67/247 (27%), Gaps = 46/247 (18%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             K LDAD + + E+ + + + ++  K+ +  +                     + V  K
Sbjct: 1   MIKALDADFISVLEIENSSVLKQLAMKSGYKFYEFATNKNAP----------VGLGVMSK 50

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
              +  +   +            R  +   +   G+ I     H  +             
Sbjct: 51  YPILSSRKIVIP-------NLKTRPILVSEISFGGETIKFFSTHFPA----------AKN 93

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           S       A  +   +  +K S    +I GD N    Y    +D           +R   
Sbjct: 94  SLKDRKTAANTMIKAVENEKNS----IILGDLNSNYGYGFLLNDLNGEFKNLWEFVRNRD 149

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHC 296
                     + +    ID+ ++  + +         SF     +   I     + SDH 
Sbjct: 150 --------RSSYKKGGAIDHIMLQNSFFNGNIRYKDSSFGVFKPSFLSIG----KFSDHY 197

Query: 297 PISIDYD 303
            I     
Sbjct: 198 AIYAVLT 204


>gi|15838039|ref|NP_298727.1| hypothetical protein XF1438 [Xylella fastidiosa 9a5c]
 gi|9106456|gb|AAF84247.1|AE003974_2 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 245

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 79/286 (27%), Gaps = 60/286 (20%)

Query: 27  VSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++ NI   S     S +            R   +   + Q A     DIV LQE    + 
Sbjct: 2   LTANIQAASSTRRYSDYVTRSWSYALPIGRKRINLDAIAQLAGER--DIVGLQESDPGSL 59

Query: 80  VAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +    +  +      +       + +          +  R K  ++   + P       
Sbjct: 60  RSGFTNQTCYLAQRAGFHYWSHQPNRRMAGVASSANGLLSRLKPRQINNHALP------- 112

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R   R  +          + V   HL                      Q  ++ D + 
Sbjct: 113 -GRIRGRGVLLAKFGNGFDSLVVAVAHLSLG-------------VRSRMAQLVFIADLLA 158

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +   +    ++ GDFN + +       + +T      ++              + R +  
Sbjct: 159 EYPNT----ILMGDFNCRADCSEMQVLYRRTRLQPPGVVIPT---------FPSWRPERA 205

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ID+ ++ +              +   + + +     SDH  +S+D 
Sbjct: 206 IDHILVSEGL-----------HICKTEAVPAA---FSDHLAVSMDL 237


>gi|6330365|dbj|BAA86508.1| KIAA1194 protein [Homo sapiens]
          Length = 575

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/351 (10%), Positives = 91/351 (25%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADIV LQE+ +    +
Sbjct: 207 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYS 266

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 267 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 326

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 327 NSEGSEAMLNRVMTKDNIGVAVLLELRKESIEMPSGKPHLGTEKQLILVANAHMHWDPEY 386

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINY--------- 217
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 387 SDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 446

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKI 255
               N+ DF +              K+                         N     K 
Sbjct: 447 GVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYTNYTFDFKG 506

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 507 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 557


>gi|58259579|ref|XP_567202.1| phospholipase C [Cryptococcus neoformans var. neoformans JEC21]
 gi|134107017|ref|XP_777821.1| hypothetical protein CNBA5190 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260519|gb|EAL23174.1| hypothetical protein CNBA5190 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223339|gb|AAW41383.1| phospholipase C, putative [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 529

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 75/285 (26%), Gaps = 57/285 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++S+N+  L+                +    +  Y  +   DIV LQE+  Y     
Sbjct: 13  TLKVLSFNVWGLAIVSKDR---------RTRIHAIADYLASSSYDIVCLQELWIYKDYEV 63

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSF 137
           V       + +S                 + +A+  +   +   + P           + 
Sbjct: 64  VREAVQRNLPFSRFFHTGALG--------SGLAIFTRFPLIAAHALPYSLSGSPAQAFAG 115

Query: 138 SRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                + A  +++      ++ + + H+ +               +    Q+  L + + 
Sbjct: 116 DFFVKKAAANVVILHPVLGEVEIWNTHMHAAGEHPPDTRQ-----AHRIAQSWELANAVR 170

Query: 197 QKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEK------------- 241
                     + GDFN +   +      D  + +D    +      +             
Sbjct: 171 GGAAKGRYVFVMGDFNSQPWSIPIAMMRDHAQLMDSFGQVHPSTNSEISPPPSPAEALRV 230

Query: 242 -----DSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQ 272
                DS  N     +             +DY    Q A      
Sbjct: 231 YGMTCDSPLNTYSAGKPIPEHVLEKGGKRLDYIFFRQPAIARRRP 275


>gi|254496441|ref|ZP_05109319.1| putative endonuclease/exonuclease/phosphatase family protein
           [Legionella drancourtii LLAP12]
 gi|254354337|gb|EET12994.1| putative endonuclease/exonuclease/phosphatase family protein
           [Legionella drancourtii LLAP12]
          Length = 242

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 69/256 (26%), Gaps = 39/256 (15%)

Query: 57  LRQYAKNL-DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--- 112
           L ++  +  D DI  LQE+                +   ++         +         
Sbjct: 17  LLKFIHHHKDIDIFCLQEVYHNAHRKIAVDDKELSLNIFSDLQKLLPNHYAIFKPAVENV 76

Query: 113 ---AIAVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSF 167
              A+ ++K    + +    +   +       N  R    +  E N +   +L++H    
Sbjct: 77  YGIAMLLKKNIEILSEGEINIHQKQHHPGIGENHSRNLQWVECEFNNQIYSILNVHGLWN 136

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                           +      +            P ++ GDFN + +    +      
Sbjct: 137 GRGKKDTPDRINQSHRIRHFMDTI----------NTPQILCGDFNLRPDTKSMH------ 180

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           I          + K      +   + +   DY ++                  + +    
Sbjct: 181 IIEQGMDNLITRHKIRSTRTSYYKKEEKFADYILISPEI--------------SVNKFAV 226

Query: 288 RGKRLSDHCPISIDYD 303
               +SDH P+ +D++
Sbjct: 227 MNDEVSDHAPLYLDFN 242


>gi|74008846|ref|XP_867663.1| PREDICTED: similar to Deoxyribonuclease I-like 1 precursor (DNase
           I-like 1) (Muscle-specific DNase I-like) (DNase X) (XIB)
           isoform 2 [Canis familiaris]
          Length = 314

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 73/313 (23%), Gaps = 32/313 (10%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M    VL L+          A+  R+ ++N   L+          S         +  + 
Sbjct: 1   MHYPAVLLLLL------PGGAEAFRICAFNAQRLTL---------SKVAREHVMDIFVRI 45

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
                 DI+ LQE+   +  A          F ++     +S   S          +   
Sbjct: 46  LARC--DIMVLQEVVDSSGSAISLLLRELNRFDNS---GFYSFLSSPLLGRNTYMEKYVY 100

Query: 121 VRVLQQSYPLLGAKDSF-SRAGNRRAVELLVEINGK-------KIWVLDIHLKSFCFLDS 172
           +    ++  L             R           K          V             
Sbjct: 101 IYRSHKTQVLDSYVYEDKDDLFAREPFVAQFTFPSKGGLGGECPERVGASSWGLAVLPSL 160

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
           +      +   + ++   L D      +       ++ GDFN     L         +  
Sbjct: 161 VLVPLHTTPKAVEKELNALYDVFLDVSQRWQSKDMILLGDFNADCASLNKKRLAELALRT 220

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                    + +              I   +  +     L   +      +    +    
Sbjct: 221 EAGFRWVIADGEDTTVRASTHCAYDRI--VLHGERCQSLLSSAAAFNFPRSFRLNEEEAL 278

Query: 291 RLSDHCPISIDYD 303
            +SDH P+ ++  
Sbjct: 279 NISDHYPVEVELS 291


>gi|221218058|ref|ZP_03589524.1| exodeoxyribonuclease III [Borrelia burgdorferi 72a]
 gi|224533538|ref|ZP_03674127.1| exodeoxyribonuclease III [Borrelia burgdorferi CA-11.2a]
 gi|225549668|ref|ZP_03770634.1| exodeoxyribonuclease III [Borrelia burgdorferi 118a]
 gi|221192006|gb|EEE18227.1| exodeoxyribonuclease III [Borrelia burgdorferi 72a]
 gi|224513211|gb|EEF83573.1| exodeoxyribonuclease III [Borrelia burgdorferi CA-11.2a]
 gi|225369945|gb|EEG99392.1| exodeoxyribonuclease III [Borrelia burgdorferi 118a]
 gi|312149695|gb|ADQ29766.1| exodeoxyribonuclease III [Borrelia burgdorferi N40]
          Length = 255

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 83/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ K    DI+ +QE  +    + K
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVKEYTPDILCIQETKALREQLPK 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +    +       
Sbjct: 46  DLIFENYYSYFSNSKIKGYSGVCIYSK---------------VEPISVRLLGEEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  V            +++ +  +   L           S +   A  L           
Sbjct: 91  RGLVAC-----YDDFILVNGYFPNSQVLRRRLGYKLDFLSYVENLADSL-------VCDG 138

Query: 203 VPFVIAGDFNRKI------------NYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNAN 248
              VI GDFN               +  G   +    +D   N   +   +  +      
Sbjct: 139 KNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETTWLDDFLNKGYVDTFRIFNKDPGYY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLILDKV-----------MGSDHCPVF 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEL 250


>gi|301784837|ref|XP_002927833.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
           [Ailuropoda melanoleuca]
 gi|281337915|gb|EFB13499.1| hypothetical protein PANDA_017669 [Ailuropoda melanoleuca]
          Length = 557

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV-------PFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S V       P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRNLQSTVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 489 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 539


>gi|238880020|gb|EEQ43658.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 438

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 88/323 (27%), Gaps = 59/323 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-----LDADIVF 70
            +    Q ++L+++N   L         K   K        +     N      D DIV 
Sbjct: 12  ASEPKKQYIKLLTFNTWGL---------KFISKHRKERLRAIADALANPKSPDEDYDIVA 62

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+        +                   K    +    A+  +          +P+
Sbjct: 63  LQEIWCEEDWQYLDLVCRPRY-----PYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPI 117

Query: 131 LGAKDSFSRAGNRRAVELLVE------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            G   +F R        + V        +   I +L+ H+ +         +   +C   
Sbjct: 118 NGRPSAFFRGDFYVGKSIAVTMFQPHHPDILPIALLNSHMHAPYGSGDASYSTHRAC--- 174

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIR 236
             QA      +   K++    +  GD N K + L            D W  ++ ++ +  
Sbjct: 175 --QAWDFAKLVRMLKKAGYAVIQVGDLNSKPDSLPYKLFTVEGGLTDSWNVLNKDNVVPN 232

Query: 237 FPKEKDS------------RCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEIL 279
                 S                N    ++       +DY ++D      +   S     
Sbjct: 233 DQIATLSLEDQISLAGVTCNSRLNTWRESRPFWEACRLDYALID---ASNITPVSAQV-R 288

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
           + +          SDH   S+D 
Sbjct: 289 FVDKLPPPLSCSYSDHFAYSVDL 311


>gi|85111016|ref|XP_963735.1| hypothetical protein NCU03243 [Neurospora crassa OR74A]
 gi|28925458|gb|EAA34499.1| hypothetical protein NCU03243 [Neurospora crassa OR74A]
          Length = 534

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 78/346 (22%), Gaps = 75/346 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A +  ++ +V+ N   L       + K   +R T     L     +    IV LQE   +
Sbjct: 2   AELPTEISIVTLNCWGL-----KYISKLRRERLTEIGRQLA--IADPQPQIVALQECFCH 54

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKD 135
                +  +  + + Y                    +A+  K          YPL G   
Sbjct: 55  EDYLTIRRETRYILPYGKFYFAGAFGG--------GLAILSKWPIEESTMYRYPLNGRPT 106

Query: 136 SFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +F R      +      +        ++++               S  C   + Q+  + 
Sbjct: 107 AFWRGDWYVGKGVACAKIRYGPGPKHIIEVFNTHTHAPYESGPNDSYIC-HRTSQSWEIS 165

Query: 193 DWITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDPNDSL---------- 234
             +    E     +  GDFN                  D W+ + P+ S+          
Sbjct: 166 KLLRGAAERGHLVLGLGDFNMLPLSLEHQIVTSHAPVQDVWRVLHPDSSVGPAYHHAEKA 225

Query: 235 --------------IRFPKEKDSRCNAN-------------------KNLRNKI-PIDYF 260
                              +                                +   +DY 
Sbjct: 226 RGRAVPTAEFNILENCATSDGPFNTWRWLPKQQKRLGIGKPVVTVDPSTPDLRGKRLDYI 285

Query: 261 VMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDYDF 304
                           +             G  LSDH  +     F
Sbjct: 286 FAGAGDVAANGGGWVVKRAAVGMMMRHPELGCSLSDHFAVEATLKF 331


>gi|296422688|ref|XP_002840891.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637117|emb|CAZ85082.1| unnamed protein product [Tuber melanosporum]
          Length = 680

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 90/338 (26%), Gaps = 62/338 (18%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           S A K +++ +NI  +  + Q       +          L+        ADI+ LQE+  
Sbjct: 312 SEADKFQVLCYNILCDKYATQNMYGYSPSWALSWDYRKKLIHDQLIESKADIICLQEVDM 371

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLG 132
            N      P      +       + +K  +  +       A   +     +L++      
Sbjct: 372 ENFNEYFMPGLAREEYKGAFYPKSRAKTMNETEKKSVDGCATFFKSTKFSLLEKQIVDFS 431

Query: 133 -----------AKDSFSRAGNRR-AVELLV---EINGKKIWVLDIHLKS----------- 166
                        D ++R   +     +     +I G ++ V ++H+             
Sbjct: 432 SAALNREDMKKTADIYNRVMPKDNIAVITFLENKITGSRLIVANVHIYWDPQYRDVKLVQ 491

Query: 167 -FCFLDSLENTYSPSCSLLSQQAQW------LKDWITQKKESLVPFVIAGDFNRKINYLG 219
               ++ +             +A+       L+  +     S +P +I GDFN  I   G
Sbjct: 492 VGILMEDITKYADQWAKSFPNRARSPGDTSPLEPAVNYSSGSQIPLIICGDFN-SIADSG 550

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKIPID 258
             +   +    ND      +   +                         N        ID
Sbjct: 551 VYELLSRGSVANDHDDLLGRTYGNFTRDGMSHPFPLKSGYSNIGELDFTNYTPGFTGVID 610

Query: 259 YFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           Y      N     +  +  +               SDH
Sbjct: 611 YIWYTTSNLNVTGLMGNVDKEYLARVPGFPNMHFPSDH 648


>gi|325919691|ref|ZP_08181693.1| exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
 gi|325549799|gb|EGD20651.1| exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
          Length = 266

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 86/313 (27%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N N L        +               ++    DAD++ +QE  +     ++
Sbjct: 1   MRIISFNANGLRSATTKGFF---------------EWFATQDADVLCVQETKAQE--HQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +         +  S    ++ +A+  ++     ++       D   R    
Sbjct: 44  AGPK-----FLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +E     + V+  ++ S    +  +           Q  +WL+  + +   S  
Sbjct: 96  ------IEARFGNLSVVSFYIPSGSSGELRQGYK-------FQVMEWLRPILDEWLASGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN-----------------DSLIRFPKEKDSRCN 246
            +V+ GD+N     L   +      +                   +              
Sbjct: 143 QYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADAPEEANAANGRGWVDTY 202

Query: 247 A--------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY ++       L + +             R 
Sbjct: 203 RVLHPQGEDYTWWSNRGAARANNVGWRIDYQLVTPWMRDKLQRCAI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P  +DY
Sbjct: 252 QRFSDHAPYIVDY 264


>gi|300692854|ref|YP_003753849.1| exodeoxyribonuclease III/endonuclease/phosphatase [Ralstonia
           solanacearum PSI07]
 gi|299079914|emb|CBJ52591.1| putative exodeoxyribonuclease III/endonuclease/phosphatase
           [Ralstonia solanacearum PSI07]
          Length = 261

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 80/304 (26%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +        +                +    DAD V +QE+         
Sbjct: 2   LRIISANLNGVRSAASKGFF---------------DWMGKQDADFVCVQELKCAQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +        +         A    +           ++G       A  R
Sbjct: 43  ---DMTPEFLAPHGYHGVFQHAVKKGYSGAGLYARHKP-----DDVIVGFDGGEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ ++ +++ S    +  +        L  Q    L+       E   
Sbjct: 95  Y-----VEARYGKLSIISVYVPSGSSGEERQQAKYRFMDLFMQHLVDLRH------EKGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N     +   +                +   +      +   +  D R    
Sbjct: 144 EVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWLTRLFDEVGYVDVFRTLDPRPEQY 203

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          + S             +  + SDH P++
Sbjct: 204 TWWSNRGQAYAKNVGWRIDYQIATPGIATTARRTSV-----------FKDIKFSDHAPLT 252

Query: 300 IDYD 303
           +DYD
Sbjct: 253 VDYD 256


>gi|229094192|ref|ZP_04225271.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
 gi|228689184|gb|EEL43006.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
          Length = 291

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 85/242 (35%), Gaps = 36/242 (14%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             + ++ ++NI               G     +S ++T  +   +  + +N ++D   LQ
Sbjct: 52  GNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFALLQ 111

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKK 119
           E+   +   + F  N              S   + +                  ++   K
Sbjct: 112 EVDIKSM--RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPVTSPMGYAEAGLSTFSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
                 + + L G +    R  +  R  VE  + +N GK + ++++HL +          
Sbjct: 170 YTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---------- 219

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           Y     +  QQ ++LK ++ +  E     ++ GD+N+ ++ +  +D  +    P   +  
Sbjct: 220 YDEGGKIRKQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLVEL 279

Query: 237 FP 238
             
Sbjct: 280 PR 281


>gi|123487248|ref|XP_001324898.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3]
 gi|121907789|gb|EAY12675.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3]
          Length = 289

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 87/310 (28%), Gaps = 82/310 (26%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           ++ AQ +++ +WN+ +L              R   ++T    Y  +   DI+ +QE   +
Sbjct: 3   STTAQVIKIATWNVASLRA------------RWKDNFT---FYINSSKPDIICIQETKFH 47

Query: 78  NAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             +    K F  + +  ++   +   ++                     +++S+     +
Sbjct: 48  VDMKESLKNFKLDGYKGYFFHAKKAGYAGTCIYTKYK---------PVSVKRSFADPDGR 98

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIH-LKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                          + +  K  ++++ + + +   L  L+         +      L+ 
Sbjct: 99  C--------------ITMEFKNFYLINTYVVNAGEDLGRLDYKIKEWNPKIRNHIMELEK 144

Query: 194 WITQKKESLVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRF 237
                     P +  GD N                           F   ++     I  
Sbjct: 145 --------KKPVIWTGDLNVAHKPIDIWQAEGHEKIAGYTDEERKWFDDFLNEGHIDIYR 196

Query: 238 PKEKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
               +S      N R           IDYF+  +   + L            D +     
Sbjct: 197 ELHPESHEFTFFNYRGQAKSKNQGWRIDYFITGKGNIEKLGIS---------DCVIEGTI 247

Query: 291 RLSDHCPISI 300
             SDH P+ +
Sbjct: 248 DGSDHQPVIL 257


>gi|325578028|ref|ZP_08148222.1| endonuclease/exonuclease/phosphatase [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325160261|gb|EGC72389.1| endonuclease/exonuclease/phosphatase [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 263

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 84/297 (28%), Gaps = 54/297 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79
           ++L++ N++  L                     +L +       DI+ LQE+    S  A
Sbjct: 1   MKLLTLNVHAWLEAN------------QAEKIEILAETIVEKGYDIIALQEVNQLMSSPA 48

Query: 80  VAKVFPKNTW---------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           ++    ++ +                 L   +     +     IA   +       ++  
Sbjct: 49  ISPTLKQDNYGVILLNKINQRVAQKYSLFWSNSHIGYDKYDEGIAFLTRLPVYDVDAF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      +R+ + L VE  G+ I     H+         +                
Sbjct: 108 CSQHQRLDSILSRKIIGLTVEYQGQLIECYSCHINLPNCDGENQLDN------------- 154

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-----RC 245
              +I ++ +S    ++ GDFN             K++   D+     ++          
Sbjct: 155 -VRYIVERSQSANLKILMGDFNTDAISDQQAYHQIKSLGLFDTFEMAKQKDSGISVEKAI 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  K    +  +DY  ++Q       Q  F+               +SDH  + +  
Sbjct: 214 DGWKGHSEEKRLDYIFLNQAKRVLSSQVIFNGKNKPI---------VSDHFGVEVAL 261


>gi|319649900|ref|ZP_08004051.1| hypothetical protein HMPREF1013_00655 [Bacillus sp. 2_A_57_CT2]
 gi|317398480|gb|EFV79167.1| hypothetical protein HMPREF1013_00655 [Bacillus sp. 2_A_57_CT2]
          Length = 261

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 74/268 (27%), Gaps = 41/268 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLI 99
               +L +  K    D++ LQE+               +  A +  +    I        
Sbjct: 18  EKIKILAEAIKENLYDVIALQEVSQHIKAPLIDGHIREDNYALLLIEELRKIGVKDYVFK 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +A+  ++     QS+ +   +D       R+ V + +    K I  
Sbjct: 78  WDFSHIGYDIYEEGLAIITRHEIKEDQSFFITKNRDQKHWK-TRKIVGIKLLHQDKPISF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL            +         Q + L      K       ++ GDFN       
Sbjct: 137 YSCHLGW----------WHDQEESYRFQVESLL----SKVPKDESAILMGDFNSSAYVRN 182

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQES 274
              DF       D+     ++             +N ++ + ID  +  Q       +  
Sbjct: 183 EGYDFLTGNGLYDTYELASRKDSGVTVRGKIAGWENNKHDMRIDLILSAQPIQPKYSRVI 242

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
           F+ I             +SDH  + I+ 
Sbjct: 243 FNGIHKPI---------ISDHYGVEIEI 261


>gi|296193404|ref|XP_002744504.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Callithrix
           jacchus]
          Length = 557

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/351 (10%), Positives = 91/351 (25%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADIV LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINY--------- 217
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKI 255
               N+ DF +              K+                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 489 IIDYIFYSQPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 539


>gi|212659363|ref|NP_001129877.1| CCR (yeast CCR4/NOT complex component) homolog family member
           (ccr-4) [Caenorhabditis elegans]
 gi|189310653|emb|CAQ58128.1| C. elegans protein ZC518.3d, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 677

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 92/348 (26%), Gaps = 68/348 (19%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  +     S   +          L+ +  +  +AD++ LQE+ +    
Sbjct: 290 TFTVLCYNVLCDKYATVNQYSYCPSWALNWEYRKGLIIKEIRTYEADVITLQEVETEQFR 349

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLL------- 131
               P+     +       + +K     +       A+  K  +       L        
Sbjct: 350 TLFQPELKQLGYAGIFEAKSRAKTMGEEERKYVDGCAIFWKVDKFDMDKQYLFEFSSVAM 409

Query: 132 ----GAKDSFSRAGNR--RAVELLVEIN---------------------GKKIWVLDIHL 164
                +++  +R   R    +  +++I                      G  + V   H+
Sbjct: 410 KKASTSENMLNRVMPRDNIGLCAVLKIKESVYANKFLGRMQIPMNDNVVGNPLVVATAHI 469

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------ 218
                   ++   S   +    +         Q  +  VP +I GDFN   +        
Sbjct: 470 HWDPEFCDVKLVQSMMLTHEVSRVLEEVSKKYQITQQQVPVLICGDFNSLPDSGVFEYLS 529

Query: 219 ----GNNDDFWKTIDPNDSLIRFPKEKDSRC-----------------NANKNLRNKIPI 257
                      K+   +  L +F    D                      N  L  K  I
Sbjct: 530 KGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYTLDFKGMI 589

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDD---IKSRGKRLSDHCPISIDY 302
           DY      +   L      +  + + +           SDH PI   Y
Sbjct: 590 DYIFATPQSLARLGILGPFDPQWVQSNKILGFPHPHVASDHIPIMAQY 637


>gi|297295915|ref|XP_002804715.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Macaca
           mulatta]
          Length = 557

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/351 (10%), Positives = 91/351 (25%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADIV LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKESIEMPSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINY--------- 217
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKI 255
               N+ DF +              K+                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 489 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 539


>gi|297476018|ref|XP_002688421.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like [Bos
           taurus]
 gi|296486473|gb|DAA28586.1| CCR4-NOT transcription complex, subunit 6-like [Bos taurus]
          Length = 440

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 71  SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 130

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 131 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 190

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 191 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 250

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 251 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 310

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 311 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 370

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 371 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 415


>gi|296196223|ref|XP_002745726.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
           [Callithrix jacchus]
          Length = 555

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 186 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 245

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 246 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 305

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 306 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP 365

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 366 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 425

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 426 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 485

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 486 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 530


>gi|28872863|ref|NP_056270.2| CCR4-NOT transcription complex subunit 6 [Homo sapiens]
 gi|114603885|ref|XP_001155177.1| PREDICTED: CCR4-NOT transcription complex subunit 6 isoform 1 [Pan
           troglodytes]
 gi|46396033|sp|Q9ULM6|CNOT6_HUMAN RecName: Full=CCR4-NOT transcription complex subunit 6; AltName:
           Full=CCR4 carbon catabolite repression 4-like; AltName:
           Full=Carbon catabolite repressor protein 4 homolog;
           AltName: Full=Cytoplasmic deadenylase
 gi|119574137|gb|EAW53752.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_a [Homo
           sapiens]
 gi|119574138|gb|EAW53753.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_a [Homo
           sapiens]
 gi|156230979|gb|AAI52470.1| CNOT6 protein [Homo sapiens]
 gi|168269724|dbj|BAG09989.1| CCR4-NOT transcription complex subunit 6 [synthetic construct]
 gi|182887909|gb|AAI60174.1| CCR4-NOT transcription complex, subunit 6 [synthetic construct]
          Length = 557

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/351 (10%), Positives = 91/351 (25%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADIV LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKESIEMPSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINY--------- 217
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKI 255
               N+ DF +              K+                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 489 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 539


>gi|293399793|ref|ZP_06643939.1| endonuclease/exonuclease/phosphatase family protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306193|gb|EFE47436.1| endonuclease/exonuclease/phosphatase family protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 301

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/345 (12%), Positives = 96/345 (27%), Gaps = 90/345 (26%)

Query: 2   IRKYVLALVFFLVPCTAS--------------VAQKVRLVSWNINTLSEQEGVSLWKNSV 47
           ++K + AL    +  TA+                  + + S NI                
Sbjct: 1   MKKLLCALCAMTLLATATGCSNNNADKDKKETSGNTLVVASNNI---------------D 45

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK-----VFPKNTWCIFYSTERLINHS 102
            ++  D    R+  +    +I  LQE+ +            F  + +   + +  +    
Sbjct: 46  AKSQPDVDAQRKLLEENGVEIFGLQEVDNMTRRNHYDVVSKFKVDPYKDAFFSNAIAFSG 105

Query: 103 KRDS-------------NNDIHTAIAVRKKNVRVLQQSYPLLGAKD-----------SFS 138
                               +++ +   K+  + L  +Y      +           + +
Sbjct: 106 GEYGIATVSKYEFKSKDATKLYSDLFAGKEIAQELADAYKDYDPDNKESEAKMDAVSAKN 165

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R    +++E +GK+I   + HL                  L  QQ + L   +   
Sbjct: 166 PIEPRLYQRVVIEKDGKEIAFYNTHLSY------------EDQKLRKQQMETLMKAMD-- 211

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            ++    +  GDFN   +      +F    +          +     N   +      +D
Sbjct: 212 SDTCKYVIAVGDFNADQST----KEFDAFKEKYHIANGLDGKWLDTYNGVDDTMKVNSVD 267

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ++ +N     ++                  +LSDH P+    +
Sbjct: 268 NIIVSKNITIKEVKMIP--------------SKLSDHNPLVATLE 298


>gi|242216210|ref|XP_002473914.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726940|gb|EED80874.1| predicted protein [Postia placenta Mad-698-R]
          Length = 452

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 88/320 (27%), Gaps = 61/320 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N   L         K   K  T+    +       D D+V LQE+  Y    ++
Sbjct: 6   LRVLTLNCWGL---------KYVSKHRTARIAAIADVLAGSDYDLVVLQEVWVYGDYNRL 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL------LGAKDSF 137
                     +    + +SK   +  +   +A+  +   +    +P       +      
Sbjct: 57  RA--------AVSTRLPYSKFFYSGALGAGLAILSRFPIIGATIHPYSLNGSPIEVIQGD 108

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              G   A  L+      ++ V + HL +        +      +     A        Q
Sbjct: 109 WFVGKAAASILVAHPILGQVQVFNTHLFAPGGDSGPLHLQ----AHRLVNAWEFAKLARQ 164

Query: 198 KKESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIRFPKE----------- 240
             E     + AGDFN     L  +            +  + +    P             
Sbjct: 165 AAEVGRYVIAAGDFNSSPASLPMSVIQEHASLTDAWVVSHPNAPPLPNALPTPLDAVNIY 224

Query: 241 ---KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQES-----FSEILYNED 283
               DS  N+    +             +DY    Q +      ++      +  +   D
Sbjct: 225 GITADSPLNSFSAGKRLEPLARKFQGKRLDYIFFRQPSSPPASDKTPILKCVNTKVAFTD 284

Query: 284 DIKSRGKRLSDHCPISIDYD 303
            +       SDH  +   ++
Sbjct: 285 AVPGTDFSYSDHFGLEATFE 304


>gi|290961113|ref|YP_003492295.1| hypothetical protein SCAB_67561 [Streptomyces scabiei 87.22]
 gi|260650639|emb|CBG73755.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 251

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 72/279 (25%), Gaps = 52/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+NI                     D   L +       D+V +QE   +    K 
Sbjct: 19  IRVLSYNIR----------------SMRDDTDALARVITACAPDLVLIQEAPRFFRWRKK 62

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +       S    ++     S   +   +        V +    LL       R   R
Sbjct: 63  LARL---AAASGLVTLSGGATASGPALLCGL-----RATVERTEDVLLPLTPGLHR---R 111

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V     ++ VL  HL             S       +Q   L D +      + 
Sbjct: 112 GFATAVVRFGRARLGVLSCHL-------------SLQKDERYEQGGLLLDRLAGL--GVT 156

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V  GD N + +               +    +        +++        ID  +  
Sbjct: 157 HAVAGGDLNERPDGRTFRRL------AGELQDCWTTAPWGGEHSSTPTDPHQRIDAILAT 210

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                            +EDD+    +  +DH P+    
Sbjct: 211 SGIEVLGCGVPLDHPGVSEDDL----RTATDHLPVLAAL 245


>gi|157151235|ref|YP_001449822.1| RgfB [Streptococcus gordonii str. Challis substr. CH1]
 gi|157076029|gb|ABV10712.1| RgfB [Streptococcus gordonii str. Challis substr. CH1]
          Length = 271

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 67/278 (24%), Gaps = 54/278 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLAERILQEKYDVICLQEVNQLMESEQVVQAPFYQAVEGAIAIHQDHFALCLVKK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  + +  KN    ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVTILSKNPLTPKEV--LVSEVNDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E +                    +  +   P V+ 
Sbjct: 136 ETEVEGQLMTIASCHLSWWGKGFQGEWSKLE----------------EELLKVKTPLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN  ++Y G        +   DS     K                      IDY    
Sbjct: 180 GDFNNPVDYEGYQHILKSPLKLQDSHKVAQKISGQATVEGAIAGWDGNQDALKIDYIFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           Q          F                +SDH  + ++
Sbjct: 240 QGIQIESSAVVFDGKETPV---------VSDHFGLEVE 268


>gi|325695113|gb|EGD37015.1| RgfB protein [Streptococcus sanguinis SK150]
          Length = 271

 Score = 66.1 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 64/280 (22%), Gaps = 54/280 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS------------- 94
           +        L +       D++ LQE+       +V     +                  
Sbjct: 15  EGQEIKLNQLVERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIAIHQDNFALCL 74

Query: 95  ---------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 +  +  +A+  +    L     L+   +       R+ 
Sbjct: 75  VEKLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKP--LASREVLVSEANDPRDYHTRKV 132

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +    E+ G+ + +   HL  +      E                      +  +   P 
Sbjct: 133 LLAETEVEGQLLTIASCHLSWWDKGFQGEWAKLE----------------EELLKVKTPL 176

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYF 260
           V+ GDFN  +   G        +   DS     +                NK    IDY 
Sbjct: 177 VLMGDFNNPVGQQGCQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYV 236

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              Q          F                +SDH  + +
Sbjct: 237 FTSQGIDVERSAVVFDGKEIPV---------VSDHFGLEV 267


>gi|283457615|ref|YP_003362199.1| metal-dependent hydrolase [Rothia mucilaginosa DY-18]
 gi|283133614|dbj|BAI64379.1| metal-dependent hydrolase [Rothia mucilaginosa DY-18]
          Length = 292

 Score = 66.1 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/278 (11%), Positives = 78/278 (28%), Gaps = 46/278 (16%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY------------------ 93
           +    L ++      D++ LQE+    +   V     +                      
Sbjct: 18  AKIRTLAKFIIEQQVDVIALQEVNQLTSTPVVKEPLNYRGGAGVPVREDNYALLLVQALN 77

Query: 94  ---STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150
              +T            +     +A+  +      +    +    ++ +   R A   L+
Sbjct: 78  EMGATYEWTLTETHIGWDRYDECVAILSRMPIRGIRPI-DMSPDYTYFQVQRRAAQAALI 136

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
           E      W    H+  + F             L +Q+   L   + +      P ++ GD
Sbjct: 137 ETPSGPFWCATTHMSWWDFDGEP---------LFAQEFTRLSQALAECA-ETAPVLLGGD 186

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQN 265
           FN   +       F  +    D+       K       +    +       ID+      
Sbjct: 187 FNSAAHLPDEGYAFVTSTGLIDTRTIAKHTKGENTVHREIAGWEGSSDAKRIDFVF---- 242

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               L+  +   +++ ++      + +SDH  + ++ D
Sbjct: 243 -TDRLVDVASHTVVFRDNSP----EAISDHSGLLLEID 275


>gi|308805745|ref|XP_003080184.1| Predicted Mg2+-dependent phosphodiesterase TTRAP (ISS)
           [Ostreococcus tauri]
 gi|116058644|emb|CAL54351.1| Predicted Mg2+-dependent phosphodiesterase TTRAP (ISS)
           [Ostreococcus tauri]
          Length = 387

 Score = 66.1 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 75/297 (25%), Gaps = 48/297 (16%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +RL+++N+    +               +    L +     D  ++ LQE+   +  
Sbjct: 108 AGDLRLLTYNV-WFGDVAQA-----------ARLEALGKVIAECDPHVLCLQEVTPQSLF 155

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A     + W   Y         +  S       + + K+ +             +S    
Sbjct: 156 A--LRAHEWWSEYVVGPKPQLQEYFS-------VVLFKREIGSELVRRDQHPFANSKMGR 206

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                  +   ++G    V   HL+S+        +   S      Q +     + +   
Sbjct: 207 CLDIVSYVRCPLSGTNFAVGSSHLESYIS------SNRTSAQERRVQIEECFSRLNKHAN 260

Query: 201 SLVPFVIAGDFNRKINYLG---NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           +    +  GD N                  ++       F  +          L+    +
Sbjct: 261 A----IFMGDTNWDDKDGDVPLPEGWRDAWLELRPDEPGFTYDARKNDMLRGYLQK--RL 314

Query: 258 DYFVMDQNAYKFL------------IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D   +    +               +    +     + +I       SDH  + +  
Sbjct: 315 DRAFVKLKHFDVKNIEMVGTQPIPGVTYHKTVSNRGKSEIIELPVLPSDHFGLLLTL 371


>gi|226226101|ref|YP_002760207.1| hypothetical protein GAU_0695 [Gemmatimonas aurantiaca T-27]
 gi|226089292|dbj|BAH37737.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 322

 Score = 66.1 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 81/310 (26%), Gaps = 48/310 (15%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-G 75
            A  A  V + +WN+  L             +R   D+ L+ +       D+V +QE+  
Sbjct: 32  PAKTADTVLIATWNVANLGA----------QQRRDEDFALIAEMLSWF--DLVAVQEVND 79

Query: 76  SYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           ++  +A +       +    S     N       +     ++     V      Y  +  
Sbjct: 80  NFADLAYIVQLMGTKYRYVMSDASGNNERMAFVYDSRKVKLSEEIGEVAFPPSQYKSVSV 139

Query: 134 KDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--SPSCSLLSQQAQ 189
           + +       +R             + +L++HL      ++  +      +      + +
Sbjct: 140 EGASGAFAGFDRSPYLGTFVAEHFSLTLLNVHLYFGGEQEAHIHRRALETAAVARWSRLR 199

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
               +      +    +  GDFN      GN      T      L R             
Sbjct: 200 AASKY-----ATTRDVLALGDFNMPRGEPGNLVYSAAT---QAGLKRPAHSSQVPSAIAS 251

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----------------KRLS 293
           + +     D  +           ++     Y+     +                    +S
Sbjct: 252 DNQY----DQILYFPE-QTEPKLKTMGVFDYDTAIFSALWNGAVNQDRKKFCAYLRYYMS 306

Query: 294 DHCPISIDYD 303
           DH P+     
Sbjct: 307 DHRPVWCQMS 316


>gi|239940757|ref|ZP_04692694.1| hypothetical protein SrosN15_07158 [Streptomyces roseosporus NRRL
           15998]
 gi|239987235|ref|ZP_04707899.1| hypothetical protein SrosN1_08017 [Streptomyces roseosporus NRRL
           11379]
 gi|291444196|ref|ZP_06583586.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291347143|gb|EFE74047.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 341

 Score = 66.1 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 81/300 (27%), Gaps = 72/300 (24%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L +   L+   +     + + + N+N  +                 D     Q      A
Sbjct: 110 LNVFGGLLTDKSGGGGDLTVATHNVNAGNP----------------DPEGTAQQVAGSGA 153

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V LQE+                    +    + + R   + +   + +  K      +
Sbjct: 154 DVVALQELPGRQV---------------STYEKSLAGRYPYHSVQGTVGLWSKYPLADTK 198

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS 185
              +              A+   V+    ++ V   HL S    L +         S   
Sbjct: 199 PVDIKMGWTR--------AMRSTVKTPQGEVAVYVAHLPSVRVKLHAGFTANQRDDS--- 247

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             A  L + I    E +   V+ GD N  +N         ++++   + +R  +      
Sbjct: 248 --ADALGEAIAD--ERVERVVLLGDLNGTMND--------RSLNAVTAQMRSTQGAAGDG 295

Query: 246 NANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        ID  ++                      + + G   SDH PI+   +
Sbjct: 296 FGFSWPASFPMARIDQIMVKG------------VEPMASWTLAATG---SDHLPIAARVE 340


>gi|86742477|ref|YP_482877.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
 gi|86569339|gb|ABD13148.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
          Length = 263

 Score = 66.1 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 78/313 (24%), Gaps = 89/313 (28%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +RL S+NI + LS  +G                        L  D++ LQE+      + 
Sbjct: 1   MRLGSFNIMHGLSLTDGTVEP-----------ARFAAAVSALGVDVLGLQEVDLDQPRSG 49

Query: 83  VFP------------KNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQ 125
                           + W    +         R ++           IA+  +      
Sbjct: 50  GLDLAAEAAAMIGAGDDDWRFVPTVFGTPGVGWRPADGQRRDDEPAYGIALISRLPVREW 109

Query: 126 QSY----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           +                  P    +        R A+   VE  G  + V++ HL     
Sbjct: 110 RVIDLGRAPVRSPIAIPGGPDRRGRLIMLDDEPRAAIAARVESAGGPLTVVNTHLSFVPG 169

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            ++              Q + L   +        P V+ GD N               + 
Sbjct: 170 WNA-------------VQLRRLARRLADVPG---PLVLLGDLN---------------LP 198

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                      + +          ++ +D+ +        +I      +           
Sbjct: 199 GRLPAALTRWRRLAVTPTYPAHSPRVQLDHVLARGPVG-RIIAVQARRVP---------- 247

Query: 290 KRLSDHCPISIDY 302
             +SDH  +S+D 
Sbjct: 248 --ISDHLALSVDL 258


>gi|195978878|ref|YP_002124122.1| exodeoxyribonuclease III RgfB-like [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195975583|gb|ACG63109.1| exodeoxyribonuclease III RgfB-like [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 273

 Score = 66.1 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 75/280 (26%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY------------------ 93
                L ++    + D++ LQE+            + +                      
Sbjct: 19  KKLFDLAEHILAQNYDVICLQEINQLIDSEAAVSLSGYQPIAGTPAIHQDNFALLLVNYL 78

Query: 94  ----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                +            +  H  +A+  K     Q S  L+ A         RRA+   
Sbjct: 79  KKRGQSYYWSWAYNHIGYDIYHEGVAILSKQPI--QASDILVSAVADEYDYHTRRALLAK 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             I+G++  V+ +HL  F      E     +        Q L            P ++ G
Sbjct: 137 TTIDGREAAVVSLHLSWFDKGFVGEWQRLEAA------LQQLA----------CPVLLLG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        +D  DS                 +  ++ +    +D+    +
Sbjct: 181 DFNNPSGQEGYELILKSPLDLQDSHQAADYVFGDHSIVAAIDGWEDNKEAFKVDHVFTSK 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     F+               +SDH  + +D ++
Sbjct: 241 A---------FTINSSKVTFDGGEAPVVSDHYGLEVDLNW 271


>gi|302678459|ref|XP_003028912.1| hypothetical protein SCHCODRAFT_78560 [Schizophyllum commune H4-8]
 gi|300102601|gb|EFI94009.1| hypothetical protein SCHCODRAFT_78560 [Schizophyllum commune H4-8]
          Length = 322

 Score = 66.1 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/339 (11%), Positives = 86/339 (25%), Gaps = 78/339 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN-----------------SVKRTTSDYTLLRQYAKNLDA 66
           +R+ SWN+   S+ + +++  +                 S +  ++    + +   N   
Sbjct: 1   MRVGSWNLRYDSQPDNITVADSLAALGDPLQEPTYLQNTSERPWSTRRVRVAELLLNKGV 60

Query: 67  DIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           +++  QE  +   N + ++   + W            +   S      +           
Sbjct: 61  EVIGFQEALVRQVNDLQELLGSD-WSWVGVGRDDGVEAGEYSPIFWKNSTLQLLDWDYFW 119

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
             S P   +K   + +  R       +   G  + V + H+                   
Sbjct: 120 TSSTPFEPSKYEGAGS-YRICTVAHFQPATGPTLTVFNTHM-----------DDQSDDQR 167

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRK----------------------------- 214
               +  L     +   +  P ++ GDFNR+                             
Sbjct: 168 RLAASLVLYRARYEAVNAGGPVLVMGDFNRRVIIPISPPTGGDSGAYNISTGVLEPVAIN 227

Query: 215 ------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN----KIPIDYFVMDQ 264
                      +    +  +D      R     +          N       ID+     
Sbjct: 228 QTFADKYAVTDDQLPDFTLLDLRGQTPRRSVSSNFATFTGFTPPNNASDWGRIDFLFGGS 287

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           N              + +  +   G  +SDH P+ +D  
Sbjct: 288 NGGWTSTA------YHVDPSLTDDGLYMSDHRPVFVDVS 320


>gi|73970321|ref|XP_538584.2| PREDICTED: similar to CCR4-NOT transcription complex, subunit 6
           isoform 1 [Canis familiaris]
          Length = 557

 Score = 66.1 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRNLQSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 489 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 539


>gi|312878938|ref|ZP_07738738.1| exodeoxyribonuclease III Xth [Aminomonas paucivorans DSM 12260]
 gi|310782229|gb|EFQ22627.1| exodeoxyribonuclease III Xth [Aminomonas paucivorans DSM 12260]
          Length = 261

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 70/300 (23%), Gaps = 71/300 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++ S+N+N                   +   +L ++      D++ LQE    +     
Sbjct: 4   FKVASFNVN----------------SVKTRLPILERWLGEDPVDVLCLQETKVQD----- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S  R + +         +  +AV  +                     G R
Sbjct: 43  -----PDFPVSAFRDLGYHVAFRGMKSYNGVAVASR---EEPDEVAFGFGDGEEPDDGPR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A      +    + VL+ ++     L+  +  Y             +   + +      
Sbjct: 95  VA-----RVRFGDLTVLNTYVPQGKALEHPDFLYKLRFFER------VLALLERHCREAD 143

Query: 204 PFVIAGDFNRKINYLGN------------NDDFWKTIDP--NDSLIRFPKEKDSRCNANK 249
           P +  GD N                    + D  +      +  L    ++         
Sbjct: 144 PVLWTGDLNVAPTDRDVTHPENKRDHVCFHRDVQRAFRDVLSWGLEDVYRKHRPGDGEFS 203

Query: 250 NLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               +            ID+ +      +  +                  +R SDH  + 
Sbjct: 204 FWDYRVRDSLARNIGWRIDHLLASPPLAERSVDAYAV-------RELRAQERPSDHTAVV 256


>gi|242218663|ref|XP_002475120.1| predicted protein [Postia placenta Mad-698-R]
 gi|220725737|gb|EED79712.1| predicted protein [Postia placenta Mad-698-R]
          Length = 452

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 82/320 (25%), Gaps = 61/320 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N   L         K   K  T+    +       D D+V LQE+  Y    ++
Sbjct: 6   LRVLTLNCWGL---------KYVSKHRTARIAAIADVLAGSDYDLVVLQEVWVYGDYNRL 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL------LGAKDSF 137
                     +    + +SK   +  +   +A+  +   +    +P       +      
Sbjct: 57  RA--------AVSTRLPYSKFFYSGALGAGLAILSRFPIIGATIHPYSLNGSPIEVIQGD 108

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              G   A  L+      ++ V + HL +        +      +     A        Q
Sbjct: 109 WFVGKAAASILVAHPILGQVQVFNTHLFAPGGDSGPLHLQ----AHRLVNAWEFAKLARQ 164

Query: 198 KKESLVPFVIAGDFNRKINYLGNN-DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR---- 252
             E     + AGDFN     L  +      ++     +                      
Sbjct: 165 AAEVGRYVIAAGDFNSSPASLPMSVIQEHASLTDAWVVTHPNAPPLPNALPTPLDAVNIY 224

Query: 253 ------------------------NKIPIDYFVMDQNAYKFLIQES-----FSEILYNED 283
                                       +DY    Q +      ++      +  +   D
Sbjct: 225 GITADSPLNSFSAGKRLEPLARKFQGKRLDYIFFRQPSSPPASDKTPILKCVNTKVAFTD 284

Query: 284 DIKSRGKRLSDHCPISIDYD 303
            +       SDH  +   ++
Sbjct: 285 AVPGTDFSYSDHFGLEATFE 304


>gi|198282493|ref|YP_002218814.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|198247014|gb|ACH82607.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC
           53993]
          Length = 255

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/303 (9%), Positives = 70/303 (23%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL SWN+N                   +    LR++   + AD +  QE+         
Sbjct: 3   MRLYSWNVNG---------------WRAACRKGLREWVATVQADALCFQEIK-------- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +     +     +    ++ +A   +                      +R
Sbjct: 40  ADPDRLPATETALDGYDARWAVAERPGYSGVATFSRAPCR-------PLTTGLGIPRFDR 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +       + +++  +               +          + I  +  +  
Sbjct: 93  EGRVVVTDCGD--FDLYNVYFPNGKKDTER-------LAFKLDFYAAFLELINARVAAGR 143

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTI--------------DPNDSLIRFPKEKDSRCNANK 249
             V  GD N     +                              +   +          
Sbjct: 144 AVVFCGDVNTAHQAIDLARPKENARISGFLPEERACLDQWAAAGWVDSFRHLHPDAVEYS 203

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DYF + ++    L                +     SDHCP+ +
Sbjct: 204 WWSQRTDARARNIGWRLDYFWIHESLLPRLRGAGI-----------ATDVTGSDHCPVWL 252

Query: 301 DYD 303
           + D
Sbjct: 253 ELD 255


>gi|37676826|ref|NP_937222.1| putative phospholipase C precursor [Vibrio vulnificus YJ016]
 gi|37201370|dbj|BAC97192.1| putative phospholipase C precursor [Vibrio vulnificus YJ016]
          Length = 378

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 59/193 (30%), Gaps = 24/193 (12%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q ++++++NI  L                   + L+  Y K    D++ LQE+ +    A
Sbjct: 176 QHLKIMTYNIWALPA---------IASHIDERFELIPDYVKGY--DVLALQEVFANGRGA 224

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +        + +     +         I   I  R   V   Q  +P     D F+   
Sbjct: 225 FLRELAKEYPYQTKMLDKDGFNIYDGGVI---IVSRYPIVNQAQFVFPDCTGTDCFADK- 280

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   V   G+   V   H  S+    + +           +Q + L   +     +
Sbjct: 281 --GVNYAEVIKGGEAYHVFATHTASYDTDTARDYRQRQ-----FKQMRALAQSLK--IPA 331

Query: 202 LVPFVIAGDFNRK 214
               V +GDFN  
Sbjct: 332 NETVVYSGDFNVN 344


>gi|241954730|ref|XP_002420086.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Candida dubliniensis CD36]
 gi|223643427|emb|CAX42306.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Candida dubliniensis CD36]
          Length = 470

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 81/306 (26%), Gaps = 43/306 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K R+ S N+        V   ++   R       + ++    D  IV LQE+  +  +  
Sbjct: 179 KFRIYSHNVKNGGYHSLVPGEQSWSDRLIPLVASI-KFNTFADNSIVTLQEVYKFQMLDI 237

Query: 83  VFP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +        + W  +                    A      +  +         + + +
Sbjct: 238 LKELNRHEPDKWEYYGKGRIDGEEIGEFVPIIWQPAEWELMYSDTMWLNDKDPRTSFEGW 297

Query: 138 SRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                R    + +        I V + H     F    +     S  L+    + L  W 
Sbjct: 298 DAIYARIVSYVTLRHRATDNYINVFNTH-----FDHVGQEAQVGSAKLIIDTMKVLNSW- 351

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                   P  ++GD N + N              N + +  P  K     +        
Sbjct: 352 --------PSFLSGDLNIEPNSEPYK--VLNEHLQNTADLATPFNKFGHFKSTVTGFEGE 401

Query: 256 P-------IDYFVM------------DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   IDY               D+ + +   + +           K  GK +SDH 
Sbjct: 402 VLLDGGQNIDYIFAPKYTLKMGNDEQDEASGQTTTKINLKLYQLGMLHSKFNGKYISDHR 461

Query: 297 PISIDY 302
           P+  D+
Sbjct: 462 PLVADF 467


>gi|194382600|dbj|BAG64470.1| unnamed protein product [Homo sapiens]
          Length = 555

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 186 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 245

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 246 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 305

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 306 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 365

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 366 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 425

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 426 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFYFK 485

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 486 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 530


>gi|73970327|ref|XP_856129.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 6
           isoform 4 [Canis familiaris]
          Length = 461

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 93  FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 152

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 153 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 212

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 213 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 272

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 273 SDVKLVQTMMFLSEVKNIIDKASRNLQSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 332

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 333 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFDFKG 392

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 393 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 443


>gi|319946436|ref|ZP_08020673.1| RgfB protein [Streptococcus australis ATCC 700641]
 gi|319747404|gb|EFV99660.1| RgfB protein [Streptococcus australis ATCC 700641]
          Length = 271

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 85/295 (28%), Gaps = 43/295 (14%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLR--QYAKNLDADIVFLQEMGSYNAV 80
           ++ ++ N +  + E                 Y L+   +  + +++ +V + ++      
Sbjct: 1   MKFLTLNTHSWMEENPQQKFEDLLKDILEKQYDLICFQEINQAIESPVVPVNDLYHPTPS 60

Query: 81  AKVFPKNTWCIFYS--------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           A+   ++ +             +            +  H  +A+  +      +   L+ 
Sbjct: 61  AEPIHQDHYVRCLVEKLEEEGLSYHWTWAYNHIGYDRYHEGVAILSRTPIQASE--LLVS 118

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             +  +    RR      +++GK+I V  +HL    + D               Q Q   
Sbjct: 119 DANDPTDYHTRRIAIAETQVDGKEIAVASVHL---SWWDKGFQQEWARLEERFSQLQ--- 172

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNA 247
                      P ++AGDFN      G        +   DS I               + 
Sbjct: 173 ----------KPLILAGDFNNPAGQEGYEAILASPLALQDSFIEARQTKGTYTVGPGIDG 222

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + +  + IDY    +          +           S    +SDH  +S D 
Sbjct: 223 WDDNQVPLRIDYVFTSKE---------WVIERLEVVFDGSSQPLVSDHYGLSADL 268


>gi|228964133|ref|ZP_04125257.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228795567|gb|EEM43050.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 129

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 11/127 (8%)

Query: 179 PSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            S     Q AQ +  ++   QKK +  P V+ GD N             K ++  +    
Sbjct: 7   KSEDKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMNDFEFAKP-----LKALEGTNLKNM 61

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                        +  N   +D+ ++  N        +  + ++   +I     R+SDH 
Sbjct: 62  LNTVPKENRYTYIHEGNAQVLDHILVTNNIA----PHTIVDPVHLNSNIMKEHGRVSDHD 117

Query: 297 PISIDYD 303
           P+    D
Sbjct: 118 PVLAQID 124


>gi|145531803|ref|XP_001451668.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419323|emb|CAK84271.1| unnamed protein product [Paramecium tetraurelia]
          Length = 352

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/340 (10%), Positives = 88/340 (25%), Gaps = 65/340 (19%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77
                ++++++N          +      +R       L      ++ DIV LQE+  + 
Sbjct: 16  PEKDIIKILTYNTFLRPPVVNNNGDDYKNERCELIIKEL------MNFDIVCLQEVFGFL 69

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           N+   +     + + ++ + +       S+  +   +    +   +    +         
Sbjct: 70  NSRKSILKHKAFKLGFTYQAVSPSPSFFSSQMVDGGLVTLSRYPIL-SHEFKEFPYGILS 128

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-- 195
               N+  +   + +NG+ + + + HL++             + S    Q    K ++  
Sbjct: 129 DNLSNKGVLYTKILVNGQMLHLFNTHLQASYVGKESNV--RATVSTRIDQLYCFKKFVHS 186

Query: 196 ---TQKKESLVPFVIAGDFNRK------------------------INYLGNNDDFWKTI 228
               Q+ +     ++ GD+N                                 D     +
Sbjct: 187 TLEQQQAQENDLILLVGDYNIDSRYEQGYPNDVLKQFPILQQQLGNPQKYQEYDALISIM 246

Query: 229 DPNDSLIRFPKEKD-SRCNANKNLRN-----------------------KIPIDYFV--M 262
             N          +                                      +DY    +
Sbjct: 247 TNNGKDKFINLLLEQEGKFLITYADYVEDESGQKKPMEIQLTDKADLLTGQCLDYIFQMI 306

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +N       +     +        +  +LSDH  +S D 
Sbjct: 307 PENQGNPNQIKIKQVNVEKFFVEGQKFTQLSDHYGVSCDI 346


>gi|90577899|ref|ZP_01233710.1| Exodeoxyribonuclease III [Vibrio angustum S14]
 gi|90440985|gb|EAS66165.1| Exodeoxyribonuclease III [Vibrio angustum S14]
          Length = 268

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 72/274 (26%), Gaps = 47/274 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---------FPKNTWCIFY--------S 94
               ++ +     D D++ LQE+      + +            + +             
Sbjct: 18  EKLDVVAKAIIEQDCDVIALQEVNQRYDSSIINASTVSNFPVHSDNYAYLLQQRLLVLGH 77

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
              L       S +     +A   +   +  Q   L    D       R AV + +    
Sbjct: 78  QYYLTWDFVHQSYDVYQEGLAFLSREPVIEHQVIDLNDNYDEKHWKHRR-AVRITLGYKD 136

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           + + + + H   +  ++S    +                       S    +  GDFN  
Sbjct: 137 QTLDIYNCHCGWWNDIESPFQQHIERIKSCL---------------SGRLSLFLGDFNTP 181

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKF 269
            + +     +       D+      + D        +  +N    + IDY   +QN    
Sbjct: 182 SHLVDEGYSYLIQQGFIDTYTSAQMKDDGNTVVKCIDGWQNNHEALRIDYVFSNQN---- 237

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 S   +           +SDH  + +  D
Sbjct: 238 -----VSVSSHKVIFNGDYYPIVSDHFGLIVSLD 266


>gi|257125550|ref|YP_003163664.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
 gi|257049489|gb|ACV38673.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
          Length = 291

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 96/315 (30%), Gaps = 45/315 (14%)

Query: 1   MIRKYVLALVFFLVPCT-----------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           +  K +  L   +  CT               + + + S+N   L E+            
Sbjct: 4   LKMKILALLFCLIFACTKENIETDFSQIEKNDKTIIIASFNALRLGEK------------ 51

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NN 108
              DY    +     + D++ L+E+ +   V KV            + +I+     S N 
Sbjct: 52  -QKDYKAFSKILA--NFDLIGLEEVMNEKGVKKVQAHLQKLTKEKWDYIISEDSVGSENY 108

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
             + A   R+      +    L   K+       R       +        +        
Sbjct: 109 REYYAFIYRRDKFLEAKG---LGFYKEKDENEFMREPYGAYFKAGNFDFVYII---AHSV 162

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
           F D  +     + + ++     + ++ ++  +     +IAGDFN   +     +  +K +
Sbjct: 163 FGDKEKQRLLEAANYVN-----VYEYFSKLTDEDD-IIIAGDFNTAAD-----NMAFKNL 211

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
               ++     E +       + +     D F ++    K     S        ++    
Sbjct: 212 SDKYNVSYI-LEPNENLTTLSDNKLVSSYDNFFINSKKTKEFTGNSGVYNFIKNNNYAII 270

Query: 289 GKRLSDHCPISIDYD 303
            K +SDH PI  +Y 
Sbjct: 271 KKYVSDHLPIFSEYS 285


>gi|218249629|ref|YP_002375040.1| exodeoxyribonuclease III [Borrelia burgdorferi ZS7]
 gi|218164817|gb|ACK74878.1| exodeoxyribonuclease III [Borrelia burgdorferi ZS7]
          Length = 255

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 82/303 (27%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           ++L+SWN+N +                        ++ K    DI+ +QE  +    + K
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------LEFVKEYTPDILCIQETKALREQLPK 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++S  ++  +S     +                 +   +    +       
Sbjct: 46  DLILENYYSYFSNSKIKGYSGVCIYSK---------------VEPISVRLLGEEIFDNEG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  V            +++ +  +   L             +   A  L           
Sbjct: 91  RGLVAC-----YDDFILVNGYFPNSQVLRRRLGYKLDFLFYVENLADSL-------VCDG 138

Query: 203 VPFVIAGDFNRKI------------NYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNAN 248
              VI GDFN               +  G   +    +D   N   +   +  +      
Sbjct: 139 KNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETTWLDDFLNKGYVDTFRIFNKDPGYY 198

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDYF++++   + + +    + +             SDHCP+ 
Sbjct: 199 TWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLILDKV-----------MGSDHCPVF 247

Query: 300 IDY 302
           ++ 
Sbjct: 248 LEL 250


>gi|148237113|ref|NP_001088222.1| CCR4-NOT transcription complex subunit 6-like-B [Xenopus laevis]
 gi|82180429|sp|Q5XH73|CN6LB_XENLA RecName: Full=CCR4-NOT transcription complex subunit 6-like-B
 gi|54038197|gb|AAH84200.1| LOC495050 protein [Xenopus laevis]
          Length = 550

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 91/352 (25%), Gaps = 73/352 (20%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  + ++      +           + +   + DADI+ LQE+ +    
Sbjct: 183 PFTVMCFNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVSCDADIISLQEVETEQYY 242

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLGAKDS 136
               P      +       + +K  S+ +       AI  R +   ++Q+          
Sbjct: 243 TLFMPALKERGYDGFFSPKSRAKIMSDQEKKHVDGCAIFFRTEKFSLVQKHTVEFNQIAM 302

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            +  G+   +  ++  +   + VL        F  +    +  S   L   A     W  
Sbjct: 303 ANSEGSEAMLNRVMTKDNIGVSVLLEV--HTDFSGAGMKPHHSSEKQLLMVANAHMHWDP 360

Query: 197 QKKE-------------------------------SLVPFVIAGDFNRKINYLGNNDDF- 224
           +  +                               + +PFV+  D N   +         
Sbjct: 361 EYSDVKLIQTMMFVSELKSIIEKAASRPGSPTPDSNSIPFVLCADLNSLPDSGVVEYLTN 420

Query: 225 ---------WKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNK 254
                    +K +  N+ L  F     +                         N     K
Sbjct: 421 GGVADNHKDFKELRYNECLTNFSCNGKNGTPDGRITHGFQLRSAYENNLMPYTNYTFDFK 480

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIK---SRGKRLSDHCPISIDYD 303
             IDY    +     L      +  +  D+           SDH  +    +
Sbjct: 481 GVIDYIFYSKTHIDVLGVLGPLDPQWMMDNNIAGCPHPHIPSDHFSLLTQLE 532


>gi|291401570|ref|XP_002717141.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 1
           [Oryctolagus cuniculus]
          Length = 555

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 186 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 245

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 246 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 305

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 306 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 365

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 366 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTTDPNSIPLVLCADLNSLPDSGVVEYLSN 425

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 426 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 485

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 486 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 530


>gi|281346828|gb|EFB22412.1| hypothetical protein PANDA_000289 [Ailuropoda melanoleuca]
          Length = 554

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 185 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 244

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 245 YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFTLVQKHTVEFNQV 304

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 305 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP 364

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 365 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 424

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 425 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 484

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 485 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 529


>gi|289618020|emb|CBI55597.1| unnamed protein product [Sordaria macrospora]
          Length = 541

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 81/346 (23%), Gaps = 74/346 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A +  ++ +V+ N   L       + K   +R       L     +    IV LQE   +
Sbjct: 2   ADLPTEINIVTLNCWGL-----KYISKLRRERLLEIGRQLA--IADPQPQIVALQECFCH 54

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKD 135
                +  +  + + Y                    +A+  K          YPL G   
Sbjct: 55  EDYLTIRRETRYILPYGKFYFAGAFGG--------GLAILSKWPIEESTMFRYPLNGRPT 106

Query: 136 SFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +F R      +      +        ++++                      + Q+  + 
Sbjct: 107 AFWRGDWYVGKGIACAKIRYGSGPKHIIEVFNTHTHAPYESGTPKDSYVCHRTAQSWEMS 166

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPN---DSLIRFPKEK 241
             +    E     +  GDFN     L ++         D W+ + P+         P++ 
Sbjct: 167 KLLRGAAERGHLVLGLGDFNMLPMSLEHHIVTAHAPVHDVWRVLHPDSSVGPAHHPPEKA 226

Query: 242 -------------------DSRCNANKN---------------------LRNKI-PIDYF 260
                              D   N  +                         +   +DY 
Sbjct: 227 RNVPVPTAQENILKNCATSDGPFNTWRWLPKHQKKLGIGKPVVTVDPSTPDLRGKRLDYI 286

Query: 261 VMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDYDF 304
                           +             G  LSDH  +     F
Sbjct: 287 FAGTGDVAANGGGWVVKRAAVGMMMRHPELGCSLSDHFAVEATLKF 332


>gi|153871651|ref|ZP_02000768.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS]
 gi|152071885|gb|EDN69234.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS]
          Length = 257

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 76/306 (24%), Gaps = 78/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+++ N+N +        +                +     AD+V +QE     +    
Sbjct: 1   MRIITVNLNGIRAAAKKGFF---------------DWLVEQGADVVCIQETKAQEHQLTD 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    +  +Y       +S                   + + +               
Sbjct: 46  SQFHPAGYHCYYHDAEKKGYSGVALYARQE---------PQEVIKGIGWTDIDSEGRYLE 96

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R             + ++ ++L S       +              + L+        S
Sbjct: 97  ARFP----------HVNIVSLYLPSGTSGTHRQEIKVSFMERFMPYLRELQA-------S 139

Query: 202 LVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
              +++ GD+N                    L     +   +          +  +    
Sbjct: 140 PKEYILCGDWNIAHKQIDLKNWRSNQNHSGFLPEERAWMDELFGPVRFADAFRVINQESE 199

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 ++           IDY V+     + +   S             + KR SDH P
Sbjct: 200 QYTWWSHRGRAWDNNTGWRIDYQVITPGLTEKVKSASI-----------YKEKRFSDHAP 248

Query: 298 ISIDYD 303
           +++DY+
Sbjct: 249 LTVDYE 254


>gi|256852682|ref|ZP_05558053.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T8]
 gi|256712027|gb|EEU27064.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T8]
          Length = 358

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 82/316 (25%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFPIEGTDKELVVFNLHLEAYDNGEG------- 232

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 233 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 290

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 291 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 346

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 347 --------DHQPVKME 354


>gi|229546877|ref|ZP_04435602.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1322]
 gi|307290008|ref|ZP_07569932.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0411]
 gi|229308042|gb|EEN74029.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1322]
 gi|306498850|gb|EFM68344.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0411]
 gi|315029720|gb|EFT41652.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4000]
          Length = 351

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 82/316 (25%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFPIEGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|254391520|ref|ZP_05006721.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294812316|ref|ZP_06770959.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|326440850|ref|ZP_08215584.1| hypothetical protein SclaA2_07268 [Streptomyces clavuligerus ATCC
           27064]
 gi|197705208|gb|EDY51020.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294324915|gb|EFG06558.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
          Length = 341

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 87/315 (27%), Gaps = 83/315 (26%)

Query: 3   RKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           R+   AL+  ++P               +S    + + S N+N  +              
Sbjct: 93  RRSATALLALVLPFAVWLDLFGGLLFDKSSGGGDLTVASHNVNAQNP------------- 139

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
              D     +      AD++ LQE+            +    ++S +  +          
Sbjct: 140 ---DPVKTARDVAASGADVLALQEVAQGQGRVYAKALSATYKYHSVQGTVG--------- 187

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
                         L   YPL   +      G  RA+   V     ++ V   H+ S   
Sbjct: 188 --------------LWSKYPLRDTRPVNIGLGWTRAMRSTVLTPKGEVAVYVAHMPSVR- 232

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
              ++     +     Q A  L   I++  E +   V+ GD N  +N         + + 
Sbjct: 233 ---VKLRAGFTAGQRDQSADALGKAISR--EGVERVVLLGDLNGTMND--------RALG 279

Query: 230 PNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
              S +R  +                   ID  ++       +   S   +         
Sbjct: 280 AVTSQMRSTQGAAGDGFGFSWPASFPMARIDQIMVKG-----VEPVSSWTLP-------- 326

Query: 288 RGKRLSDHCPISIDY 302
             +  SDH PI+   
Sbjct: 327 --RTGSDHLPIAARI 339


>gi|89274964|gb|ABD65927.1| unknown [Streptomyces fungicidicus]
          Length = 305

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 74/302 (24%), Gaps = 60/302 (19%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +A+  + + + +WN+  + E           KR  +    L        A ++FLQE  +
Sbjct: 45  SATGDRTLTVATWNMCGVREWNCEGTGGEDAKRGRT--ERLA---AESGARVLFLQETCA 99

Query: 77  YNAVA-KVFPKNTWCIFYSTERLINHSKR------DSNNDIHTAIAVRKKNVRVLQQSYP 129
            +  A +     +W   +          R       +        A+         ++ P
Sbjct: 100 ADVEAVRASLGASWHAEFRAYTWRGRDGRRTAVRCGAPGRGSAGYALLSAYPLSSVRAVP 159

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                        R  +   V  +   + V   HL       +  +         + Q +
Sbjct: 160 APQPAVGV----QRGILCAFVAAHD--LTVCTAHLTPRGGDLAHPDR-----EFRAGQLK 208

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L D +          V  GD N      G  +   +           P      C+   
Sbjct: 209 ALVDAV-----PERRTVYGGDLNVDP--PGERNPLSRV------WPDQPYGTHRECDGTP 255

Query: 250 NLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                          +DY                          +     +SDH  + I 
Sbjct: 256 GPLRPARPTHVSHHKLDYLF----------------TGLPVLGCRVSDTGVSDHRALLIR 299

Query: 302 YD 303
            D
Sbjct: 300 VD 301


>gi|87118245|ref|ZP_01074144.1| hypothetical protein MED121_14499 [Marinomonas sp. MED121]
 gi|86165879|gb|EAQ67145.1| hypothetical protein MED121_14499 [Marinomonas sp. MED121]
          Length = 349

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 84/311 (27%), Gaps = 49/311 (15%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           ++ +    L+ +NI+   E  G +        + SD   L +  ++ + ++V +QEM S 
Sbjct: 60  SADSGSFDLLVYNIDGFPECIGGN--------SKSDLKELLKRLESENYNLVLMQEMFSE 111

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----- 132
           +    V  ++            +   R         +         +             
Sbjct: 112 SKHDLVKDEDRLSQ--QAYPYRSKHWRGGMTSYGDGLMRLSDFPFQMNSRDNDDYSLTSN 169

Query: 133 -------------AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                                    +V +        + V + H+ +             
Sbjct: 170 EFEEYSACHGNLFDNSPDCWTEKGFSVAVHEITEDFSVHVYNTHMNAG--------RDED 221

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---NNDDFWKTIDPNDSLIR 236
             +   +Q   L D+I     S    +I GDFN K +           W+       +  
Sbjct: 222 DYNARRKQFLQLADFINSY-SSNATVIIGGDFNNKWSDYPHAVEQQAVWEMFLATTGMRL 280

Query: 237 FPKEKDSRCN---ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
             ++     +   AN    +    D       A          +++  E         LS
Sbjct: 281 ACQDFIEGTDDSIANCAASSSESTDQVAYVNRASAPY------QLVLEEYGELDNFTELS 334

Query: 294 DHCPISIDYDF 304
           DH PI   + +
Sbjct: 335 DHEPIRAKFSW 345


>gi|115583679|ref|NP_653172.2| CCR4-NOT transcription complex subunit 6-like [Homo sapiens]
 gi|300796270|ref|NP_001178452.1| CCR4-NOT transcription complex, subunit 6-like [Bos taurus]
 gi|297292652|ref|XP_002804140.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like isoform 2
           [Macaca mulatta]
 gi|297292654|ref|XP_001092697.2| PREDICTED: CCR4-NOT transcription complex subunit 6-like isoform 1
           [Macaca mulatta]
 gi|332233294|ref|XP_003265839.1| PREDICTED: CCR4-NOT transcription complex subunit 6 isoform 1
           [Nomascus leucogenys]
 gi|332233296|ref|XP_003265840.1| PREDICTED: CCR4-NOT transcription complex subunit 6 isoform 2
           [Nomascus leucogenys]
 gi|332819466|ref|XP_003310375.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 1
           [Pan troglodytes]
 gi|332819468|ref|XP_523084.3| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 2
           [Pan troglodytes]
 gi|166216089|sp|Q96LI5|CNO6L_HUMAN RecName: Full=CCR4-NOT transcription complex subunit 6-like;
           AltName: Full=Carbon catabolite repressor protein 4
           homolog B
 gi|157170238|gb|AAI52817.1| CCR4-NOT transcription complex, subunit 6-like [synthetic
           construct]
          Length = 555

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 186 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 245

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 246 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 305

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 306 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 365

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 366 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 425

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 426 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 485

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 486 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 530


>gi|218665721|ref|YP_002424683.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218517934|gb|ACK78520.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 253

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/303 (9%), Positives = 70/303 (23%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL SWN+N                   +    LR++   + AD +  QE+         
Sbjct: 1   MRLYSWNVNG---------------WRAACRKGLREWVATVQADALCFQEIK-------- 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      +     +     +    ++ +A   +                      +R
Sbjct: 38  ADPDRLPATETALDGYDARWAVAERPGYSGVATFSRAPCR-------PLTTGLGIPRFDR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +       + +++  +               +          + I  +  +  
Sbjct: 91  EGRVVVTDCGD--FDLYNVYFPNGKKDTER-------LAFKLDFYAAFLELINARVAAGR 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTI--------------DPNDSLIRFPKEKDSRCNANK 249
             V  GD N     +                              +   +          
Sbjct: 142 AVVFCGDVNTAHQAIDLARPKENARISGFLPEERACLDQWAAAGWVDSFRHLHPDAVEYS 201

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +           +DYF + ++    L                +     SDHCP+ +
Sbjct: 202 WWSQRTDARARNIGWRLDYFWIHESLLPRLRGAGI-----------ATDVTGSDHCPVWL 250

Query: 301 DYD 303
           + D
Sbjct: 251 ELD 253


>gi|47086721|ref|NP_997825.1| CCR4-NOT transcription complex, subunit 6 [Danio rerio]
 gi|37194691|gb|AAH58309.1| CCR4-NOT transcription complex, subunit 6 [Danio rerio]
          Length = 557

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/352 (11%), Positives = 95/352 (26%), Gaps = 72/352 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   +  ADI+ LQE+ +     
Sbjct: 188 FSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKSIMQEILSCSADIISLQEVETEQYYN 247

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S +D       A+  +     ++Q+           
Sbjct: 248 YFLLELKEQGYEGFFSPKSRARTMSESDRKHVDGCAVFYKTDKFSLVQKHTVEFNQLAMA 307

Query: 138 SRAGNRRAVELLVEIN-------------------GKKIW-----VLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                   GK +      +L +      +    
Sbjct: 308 NSEGSEAMLNRVMTKDNIGVAVLLELRKEMMELSAGKPLHGMEKQLLLVANAHMHWDPEY 367

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQK--------KESLVPFVIAGDFNRKINY-------- 217
            +       +   + + + D  T+         + + +P V+  D N   +         
Sbjct: 368 SDVKLVQTMMFLSEVKNIVDKATRSLKLSSVSGETNAIPLVLCADLNSLPDSGVVEYLST 427

Query: 218 ---LGNNDDF--WKTIDPNDSLIRFPKEKDSRC------------------NANKNLRNK 254
               G + DF   + ID   +     K   S                      N     K
Sbjct: 428 GGVDGAHKDFKELRYIDSLTNFNCNGKNGTSSTRITHGFKLKSAYENGLMPYTNYTFDFK 487

Query: 255 IPIDYFVMDQNAYKFL-IQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
             IDY    Q     L +          E+++         SDH  +    +
Sbjct: 488 GIIDYIFYSQPLLNVLGVLGPLEHHWLLENNVTGCPHPHIPSDHFSLFAQLE 539


>gi|57109236|ref|XP_544939.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit
           6-like isoform 1 isoform 1 [Canis familiaris]
          Length = 550

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 181 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 240

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 241 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 300

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 301 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP 360

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 361 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 420

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 421 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 480

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 481 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 525


>gi|116627133|ref|YP_819752.1| hypothetical protein STER_0240 [Streptococcus thermophilus LMD-9]
 gi|116100410|gb|ABJ65556.1| Metal-dependent hydrolase [Streptococcus thermophilus LMD-9]
          Length = 259

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 74/280 (26%), Gaps = 54/280 (19%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +     +  L++       DI+  QE+      A V     + +  S             
Sbjct: 3   EDAEGKFQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHVLPSAISIHQDHFFHLL 62

Query: 96  ----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 + ++  +AV  +      +   L+   D  +    RR 
Sbjct: 63  VEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASE--ILVSDVDDPTDYHTRRV 120

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                 ++G+K+ V  IHL  +      E                      + +    P 
Sbjct: 121 AVAETTVDGRKVAVASIHLSWWDKGFQEEWARIE----------------ERFQSIGKPL 164

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYF 260
           ++AGDFN      G        +   DS     K   S       +  K     + IDY 
Sbjct: 165 ILAGDFNNPAGREGYQTILASPLKLQDSFQVDQKTNGSYTVGPGIDGWKGNEEPLRIDYV 224

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              Q          ++    +     +    +SDH  +  
Sbjct: 225 FASQE---------WAVNRLSVIFDGNNQSLVSDHYGLEA 255


>gi|313244086|emb|CBY14943.1| unnamed protein product [Oikopleura dioica]
          Length = 654

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 83/286 (29%), Gaps = 28/286 (9%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAK 82
           +  S+NI      +                  +         DI  +QE+      A   
Sbjct: 388 KFASFNIQVFGATKYGKT---------EVKDQIVTILNRY--DIATIQEIRDSTETAFPN 436

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +                      S+ +    I  R    +V    +        +     
Sbjct: 437 LVSDINAVNDIYDWWTGARQGTTSSKEQVGFIWNRNNFSKVDGYDFDDTTTS--WFERPP 494

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   + +N ++     + + S         +   +   ++       D + +    +
Sbjct: 495 TVIVLERISMNYEQFQTQKLAIISGHLKPVSGVSDMVTEDEINHMQDVYDDLLIKH-PDI 553

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +  +I GDFN   NY+ N +    ++  + +       +     ++ +       D+ V+
Sbjct: 554 IDVLIVGDFNADCNYVANPESL--SLYTSAANDWLIPFEADTTVSSTDCAY----DHIVL 607

Query: 263 DQNAYKFLIQESFSE--ILYNEDDIKSRGKRL----SDHCPISIDY 302
             N    ++     +    Y+ D+I   G  +    SDH P+  ++
Sbjct: 608 YGNIRNSVVSSGVFDYQTFYDTDNIFYNGDPITGLISDHYPVEFEF 653


>gi|224173118|ref|XP_002339729.1| predicted protein [Populus trichocarpa]
 gi|222832130|gb|EEE70607.1| predicted protein [Populus trichocarpa]
          Length = 316

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 81/262 (30%), Gaps = 42/262 (16%)

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVR-VLQQSYPLL 131
             + NA A       + +  +       +   +  D I  AI  R   V  V   + P +
Sbjct: 18  ADALNASADKPAGAVYAVVKAPFTEAAGTVPGAGTDAITVAIVYRSDRVTPVGSAAAPNV 77

Query: 132 GAKDSFSRA--GNRRAVELLVEING--KKIWVLDIHLKS------FCFLDSLENTYSPSC 181
              D+F+ +  G R  +     + G  ++  ++  H KS            + +    + 
Sbjct: 78  STYDAFNGSIGGARVPIAQTFAVGGSAEQFTLVVNHFKSKGSVLGGAGNADVLDGQGANN 137

Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +   + AQ L +W+  +    +    V+ GDFN              T++    +     
Sbjct: 138 AARVKTAQQLSNWLATRPTGATSPHVVLVGDFNAYAKEDPI-----TTLEAGGYVKVSQG 192

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG---------- 289
                  +         +D+ ++  +    + +     I   E ++              
Sbjct: 193 L------SYAFDGMWGSLDHVLVSTSLQPSVGRAVKWAINAEEPEVLDYNVEFKSLDQQA 246

Query: 290 -------KRLSDHCPISIDYDF 304
                   R SDH PI +  +F
Sbjct: 247 SFYAPTAYRSSDHNPILLGLNF 268


>gi|325182212|emb|CCA16666.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 394

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/343 (9%), Positives = 90/343 (26%), Gaps = 69/343 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGS 76
           +S  +++ ++S+NI     +          +        +    + L + D+  LQEM  
Sbjct: 2   SSKTERLAILSFNI---FARPEGIHNGEWFRTGDYKDQRISFLLRKLENYDVALLQEMFE 58

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                + F +  + + +                I   + +  +   + +          +
Sbjct: 59  IGFRQRDFIRRAYKLGFKYHCGSIWPTITDKLLIDGGLLIISRFPIIERDRITFERGLGA 118

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                 +  +   +++  +    + +        +S       S ++   Q   L  ++ 
Sbjct: 119 DG-VCAKGVLYAKIQLTTRASDYIHVFTTHTQAGES-----LDSWTVRQHQLMQLMSFVK 172

Query: 197 QKKESLV--PFVIAGDFN----------------------------------RKINYLGN 220
           +K +     P ++ GDFN                                    +++   
Sbjct: 173 RKADQDRSNPILLTGDFNLDARHNVTHQEKNEEKSVLCTESEVYKQLIHDLSTALDHRDV 232

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNA------NKNLRNKI--PIDYFVMDQN------- 265
            D        + S        +   +       +   R      IDY     +       
Sbjct: 233 LDLMKNYNTKSKSEKCVHPITNGNGHGQLLHSLSVKDRYTDGKCIDYMFFCPSKNQNQNQ 292

Query: 266 ------AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +   +      +       +      +SDH  +S+++
Sbjct: 293 NLEIVKSKTRIDFCGIHDTTSPNQTMPIT--HISDHYGLSVEF 333


>gi|316965299|gb|EFV50052.1| putative TRAF and TNF receptor-associated protein [Trichinella
           spiralis]
          Length = 420

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 83/286 (29%), Gaps = 46/286 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
             ++SWN++ L  +  V           S           L+  ++ LQE+   ++  + 
Sbjct: 161 FSILSWNLDGLDNRNIV-----------SRVNAACDEILELEPSVLLLQEVVPENFEVLK 209

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +  + +  + +R   H+    +         R                 D    + 
Sbjct: 210 RRLGE-KYQVLENNDRYYYHTSIFIH---------RTNLECTEHHVV------DFARTSM 253

Query: 142 NRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           NR     L+E +G  ++ +++ HL+S                +   Q + +   +     
Sbjct: 254 NRNMFIALIEFDGDVQLCLVNSHLESG----------RKESRIRKSQLEEIWSLMAA-SP 302

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI---RFPKEKDSRCNANKNLRNKIPI 257
             V     GD N     L         +  +           +  +  N N   R +   
Sbjct: 303 DDVTVFFGGDTNLGFGELKTVPANVTDLFQDCGSPVDACLTWDPATNANLNIPKRCRQRF 362

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +  +         FS +      I+S     SDH  I    +
Sbjct: 363 DRIFVKASKPARFKPIEFSLVGKK--LIRSSLCHPSDHYGIYCKME 406


>gi|88799861|ref|ZP_01115434.1| hypothetical protein MED297_03025 [Reinekea sp. MED297]
 gi|88777441|gb|EAR08643.1| hypothetical protein MED297_03025 [Reinekea sp. MED297]
          Length = 1679

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/365 (10%), Positives = 87/365 (23%), Gaps = 78/365 (21%)

Query: 17   TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG- 75
              S A  VR+ ++N   L+      +  ++     +    + +  + +   +V LQE   
Sbjct: 1314 VPSYAGDVRVATFN-AYLNRSSEGQILADAQSGDDAQIQNVAEIIQRVRPHVVLLQEFDY 1372

Query: 76   ----------SYNAVAKVFPKNTWCIFYSTE---------------------RLINHSKR 104
                        N + K +       +                         +  + +  
Sbjct: 1373 VADGSAVKALQENYLGKGWNGAERIEYPYVYLAESNTGIITPFDFNKDGQSGQYGDDAYG 1432

Query: 105  DSNNDIHTAIAVRKKNVR----------VLQQSYPL------LGAKDSFSRAGNRRAVE- 147
                     + +  +              L +  P           +S+           
Sbjct: 1433 FGMFYGQYGMVLLSQYPIDYANARTFQKFLWKDMPDAKLPVNPETGESWYTEEELDVFRL 1492

Query: 148  -------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--------- 191
                   + V++    + VL  H     F    +     +         ++         
Sbjct: 1493 SSKSHWDIPVKVGKHTLHVLASHPTPPVFDGDEDRNGLRNHDETRFWRDYVDPARSSYIY 1552

Query: 192  --KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR---------FPKE 240
                 I   K     FVI GD N         DD    +  +  +              +
Sbjct: 1553 DDNGNIGGMKGERHHFVIMGDLNASPVEGDATDDPIGLLMASPYVNGDVQPTSQGGVDND 1612

Query: 241  KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS-RGKRLSDHCPIS 299
              +          K+  DY +      K      +   + + +      G + SDH  + 
Sbjct: 1613 PANENAPAHTADWKMRADYVLPGTWGNKVEQSGVYWPGIADVNHRLVGPGVKSSDHRLVW 1672

Query: 300  IDYDF 304
            +D  F
Sbjct: 1673 MDLTF 1677


>gi|260061623|ref|YP_003194703.1| Endonuclease/exonuclease/phosphatase [Robiginitalea biformata
           HTCC2501]
 gi|88785755|gb|EAR16924.1| Endonuclease/exonuclease/phosphatase [Robiginitalea biformata
           HTCC2501]
          Length = 370

 Score = 66.1 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 82/294 (27%), Gaps = 64/294 (21%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++      A  +R+V+ N+   ++ + +                L    K  + D++ L 
Sbjct: 91  ILAAQTKSAPGIRMVTANVLQSNKTDSL----------------LAAQIKAYNPDLLLLT 134

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E  +      + P                 K +   +    + +  K   +  +   ++ 
Sbjct: 135 EA-NARWRDALAPVTGKRF---------SYKEEIPLENTYGMLLYSKFPLIEPEVRFMVD 184

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                     +         +G  + +  IH        +  +T   +          L 
Sbjct: 185 DSIPSIHTRIKLP-------SGDTLQLHCIHPTPPMPQHNPMSTDRDA---------ELM 228

Query: 193 DWITQKKESLVPFVIAGDFNR--KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
                 ++S  P ++ GDFN        G      + +DP      F           +N
Sbjct: 229 RTARLTRQSDYPAIVLGDFNDVAWSESTGLFQRVGRLLDPRKGRGFF------NTYHAQN 282

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              + P+D+                    +   D++      SDH P+ I  D+
Sbjct: 283 WILRWPLDHIFA--------------HREFRLRDLEVMPDIGSDHFPVYIHLDY 322


>gi|269127864|ref|YP_003301234.1| endonuclease/exonuclease/phosphatase family protein
           [Thermomonospora curvata DSM 43183]
 gi|268312822|gb|ACY99196.1| endonuclease/exonuclease/phosphatase family protein
           [Thermomonospora curvata DSM 43183]
          Length = 586

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/332 (9%), Positives = 80/332 (24%), Gaps = 67/332 (20%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                ++ + +                +  +R  +    +         D+V +  +   
Sbjct: 272 PQRPDELAVAT-------VALDGLDPGDPPQRFAAIADQIVTALAA--PDLVTVTGLQDN 322

Query: 78  NAVAK------------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           +                            +    S + L      +S  +I T    R  
Sbjct: 323 SGSDDDGTVAADQTVAQLLAAISAAGGPGYDW-RSIDPLDGADGGESGGNIRTGFLFRTD 381

Query: 120 NVRVLQQS-----------------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                                           P   A    +    R+ +       G++
Sbjct: 382 RGLRFVDRPGGTATAPVEAVPDGAREAALSISPGRVAPQHPAWRQARKPLAGEFRWRGRR 441

Query: 157 IWVLDIHLKSFCFLDSLENT----YSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGD 210
           +  +  H  +    DSL         PS +  ++QA+ L  ++   ++       ++ G 
Sbjct: 442 LIAIANHWTARGADDSLYARFQPPRRPSEASHAEQAKVLAGFVRKLRRAGPGTGVIVTGG 501

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
            N   +            D         +          +  N    D+ ++++   +  
Sbjct: 502 LNSYGHS----RALRTLTDRTGLRDLVAELPRKERYTVISAGNGHDPDHILVNRALAELP 557

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +     +            R+S+H P+ +  
Sbjct: 558 HEIEAVRLNA------EFADRVSEHDPLVLRL 583


>gi|301121666|ref|XP_002908560.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262103591|gb|EEY61643.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 434

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 38/299 (12%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           ++       ++S N+  + E         +        +         + D+V +QE  +
Sbjct: 3   SSLAENTFSVMSINVAGIPEFLSSGSPLENSVEIGRRIS---------NWDVVNVQEDFN 53

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLLGAKD 135
           Y+A         +       R          + ++T +         + +  + +    D
Sbjct: 54  YHA-------YVYSENSHLHRTSTSGGIPFGDGLNTLSNFSFNNITDLTRSKWSVCSTFD 106

Query: 136 SFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  +    L ++  +G  + + ++H  +           +            L  +
Sbjct: 107 GADCLTPKGFTFLEIQLADGVTLDLYNLHADAGVTDADEVARAAN--------LAQLSAY 158

Query: 195 ITQKKESLVPFVIAGDFNRKINYL-GNNDDFWKTIDPNDSLIRFPKEKDSRCNA------ 247
           IT         ++ GD N +         +F + ++  D  + + +  +           
Sbjct: 159 ITANSADNA-VIVMGDTNTRYTRAADTIREFAEGLNLTDGWVEYVRNGEYPTKGAEAIVC 217

Query: 248 --NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +        +D  +   N Y  L  E ++        +   G  LSDH PIS  + +
Sbjct: 218 DASIMTNACEVVDKILYRGNNYIKLTLEKWNNENAA--FLDDNGVMLSDHPPISSIFSW 274


>gi|71895533|ref|NP_001026218.1| protein angel homolog 2 [Gallus gallus]
 gi|53127786|emb|CAG31222.1| hypothetical protein RCJMB04_3g5 [Gallus gallus]
          Length = 558

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 59/206 (28%), Gaps = 16/206 (7%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  +   T  +  + Q  K LDAD++ LQE+   +
Sbjct: 178 DFTVMSYNILSQNLLEDNSHLYKHCRQRLLIWTYRFPNILQEIKQLDADVLCLQEVQEDH 237

Query: 79  AVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              ++        +   Y                      +    V   ++  PLL   +
Sbjct: 238 YRKEIKSSLESLGYHCEYKMRTGRKSDGCAICFKTSKFSLISSNPVEFFRRDIPLLDRDN 297

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                     + L  +   K    + I      +            + L+     +    
Sbjct: 298 VG------LVLLLQPKFPCKTNAAICIANTHLLYNP---RRGDIKLTQLAMLLAEIASVA 348

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN 221
            QK  S  P V+ GDFN         
Sbjct: 349 PQKNGSFCPIVMCGDFNSVPGSPLYR 374



 Score = 38.8 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 11/105 (10%), Positives = 25/105 (23%), Gaps = 17/105 (16%)

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
           I     +         +     +  E         + R+ + +DY          + Q  
Sbjct: 449 IASEKLSSKLQHHFKLSSVYSHYFPETGLPEVTTCHSRSAVTVDYIFYSAANDDSVAQPG 508

Query: 275 FSEILYN-----------------EDDIKSRGKRLSDHCPISIDY 302
             + L+                    +        SDH P+  ++
Sbjct: 509 MEDSLHGGLKLLGRLALLTEKDLWTVNGLPNENNPSDHLPLLAEF 553


>gi|84498593|ref|ZP_00997356.1| Phytase [Janibacter sp. HTCC2649]
 gi|84381126|gb|EAP97011.1| Phytase [Janibacter sp. HTCC2649]
          Length = 401

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/366 (8%), Positives = 88/366 (24%), Gaps = 85/366 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA- 79
            Q +R+ ++N+ +L+      +  +      +    + +  +  + D+V L E       
Sbjct: 36  GQDLRVATYNL-SLNRNTAGQIVTDLSTPDNAQAKAVAEVIQRANPDVVLLNEFDYVEGG 94

Query: 80  -VAKVFPKNTWCIFYSTERLINHSKRDSN-----------------------------ND 109
               +F  N   + ++    +++    +                                
Sbjct: 95  TAVDLFRDNYLGVAHNGAAAVDYPYAYTAPVNTGVPSGFDLNNDGTVGGGDDAYGFGLFP 154

Query: 110 IHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRAVE--------LLVE 151
               + V  K                +  P       +     +            + V 
Sbjct: 155 GQYGMVVLSKYPIQTDGIRTFQHFRWKDMPGNVLPTDWYSPEEQDIFRLSSKSHWDIPVT 214

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----------KDWITQKKES 201
           +  + + VL  H     F    +     +   +   A ++                    
Sbjct: 215 VGKRTVHVLAAHPTPPSFDGPEDRNGRRNHDEIRFWADYITPGKGGYIYDDQGARGGLNP 274

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-------------------PKEKD 242
              FV+ GD+N       +       +  +  +                        + D
Sbjct: 275 SSSFVVLGDYNADPLDGDSYGAAINQLLTSKRITDPQATSEGAVEASQLQGGANLTHKGD 334

Query: 243 SRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCP 297
            + +      +    + +DY ++ ++         F  +  +     +       SDH  
Sbjct: 335 PKFDTADFSDSAPGNLRVDYTLLSKSFAVR-DAGVFWPVQADPLSRLTGVFPFPTSDHRL 393

Query: 298 ISIDYD 303
           +  D  
Sbjct: 394 VWADVT 399


>gi|332530427|ref|ZP_08406371.1| hypothetical protein HGR_10877 [Hylemonella gracilis ATCC 19624]
 gi|332040139|gb|EGI76521.1| hypothetical protein HGR_10877 [Hylemonella gracilis ATCC 19624]
          Length = 475

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 72/233 (30%), Gaps = 25/233 (10%)

Query: 32  NTLSEQEGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
                         S   +  D        +         +++ LQE+   +AV ++ P 
Sbjct: 115 RYGPNHPCRVSLDLSGGWSQYDIKLQHLRKMAAELAKGKINVLVLQEVFDEDAVRQILP- 173

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD-SFSRAGNRRA 145
             W +  +     +            A+A  K N   ++  +           R   R  
Sbjct: 174 PNWEVSSTKGLTGSPE-----IPQQLAVAYPKDNPARVRNVHAYGELSSVGPGRHPVRPG 228

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDS-------------LENTYSPSCSLLSQQAQWLK 192
           ++   ++ GK +  L +HLK+ C                         C+ +  Q   L+
Sbjct: 229 LDFTADVAGKPVRFLGVHLKAGCRSADITNPLKRDYHSAEDFERQQAECNAMLAQVPVLE 288

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            W+ ++  +   FV+ GDFNR +    +        DP   L      +D + 
Sbjct: 289 RWVDERAAAKEEFVVLGDFNRNLQGEDSKTARSDNTDPKTPLKCSFNARDGKT 341



 Score = 42.2 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 8/55 (14%)

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------GKRLSDHCPISIDYD 303
           ID+ ++     + L + SF    YN   I               SDHCP  +  D
Sbjct: 420 IDHILVSAALAQRLKKTSFVMSRYNYRRIGENTPMVVTPQDAVPSDHCPHFVALD 474



 Score = 36.8 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 1  MIRKYVLAL-VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR--TTSDYTLL 57
          M R  V A+ +   +  +A  AQ V + +WN+  L  +     W ++ KR    SD + +
Sbjct: 9  MQRWKVYAIAIAIGMMSSAVSAQTV-VATWNVAWLMAKPTYETWTSTCKRFGWPSDVSKI 67

Query: 58 RQ 59
            
Sbjct: 68 SD 69


>gi|319745959|gb|EFV98242.1| RgfB protein [Streptococcus agalactiae ATCC 13813]
          Length = 276

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 74/280 (26%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST---------------- 95
                L ++      DI+ LQE+    +         +     T                
Sbjct: 24  KKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYL 83

Query: 96  ------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+       L+    L+ A D  +    RRA+   
Sbjct: 84  NLQGLHYHWTWAYNHIGYSKYHEGVAILSLKP--LKPDDILVSAVDDETDYHTRRALVAE 141

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             +N K + V+ +HL  F                    A+  K   T   E   P ++ G
Sbjct: 142 TTLNDKVVTVVSLHLSWFEKG----------------FAEEWKRLETTLLEVETPLLLMG 185

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        +   DS                 +  +  +  + +D+    +
Sbjct: 186 DFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSE 245

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +      Q  F                +SDH  + I  DF
Sbjct: 246 DLSISSSQVVFEGGEAPV---------VSDHYGLEITIDF 276


>gi|289678676|ref|ZP_06499566.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae FF5]
          Length = 222

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 68/229 (29%), Gaps = 30/229 (13%)

Query: 54  YTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFY----STERLINHSKRDSN 107
              LR+  + + ADIVFLQE+     +   KV    T   +     S      + +    
Sbjct: 12  LPELREAVRTVSADIVFLQEVHGEQQSHARKVKDWPTISQYEFLADSMWSDFAYGRNAVY 71

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            D     A+  K   +  ++  +     S      R  +  ++E+      V  + +   
Sbjct: 72  PDGDHGNALLSKYPIIQHENLDI-----SIHGTEQRGLLHCILEVPHAG-RVHAVCVHLG 125

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                         S   QQ + L + + +      P ++AGDFN              +
Sbjct: 126 LR-----------ESHRRQQLKLLNELMAR-IPEGEPVIVAGDFNDW------RRRADAS 167

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
           +  +     F +   +   +       + +D   +           S  
Sbjct: 168 LQGSGLHEVFVERFGAPAKSFPARWPLLCLDRIYVRNATSHRPKVLSSR 216


>gi|225871289|ref|YP_002747236.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           equi subsp. equi 4047]
 gi|225700693|emb|CAW95294.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           equi subsp. equi 4047]
          Length = 273

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 74/280 (26%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY------------------ 93
                L ++    + D++ LQE+            + +                      
Sbjct: 19  KKLFDLAEHILAQNYDVICLQEINQLIDSEAAVSLSGYQPIAGTPAIHQDNFALLLVNYL 78

Query: 94  ----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                +            +  H  +A+  K     Q S  L+ A         RRA+   
Sbjct: 79  KKRGQSYYWSWAYNHIGYDIYHEGVAILSKQPI--QASDILVSAVADEYDYHTRRALLAK 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             I+G++  V+ +HL  F      E     +        Q L            P ++ G
Sbjct: 137 TTIDGREAAVVSLHLSWFDQGFVGEWQRLEAA------LQQLA----------CPVLLLG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        +D  DS                 +  ++ +    +D+    +
Sbjct: 181 DFNNPSGQEGYEMILKSPLDLQDSHQAADYVFGDHSIVAAIDGWEDNKEAFKVDHVFTSK 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     F+               +SDH  + +D  +
Sbjct: 241 ---------VFTINSSKVTFDGGEAPVVSDHYGLEVDLSW 271


>gi|325184873|emb|CCA19365.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 328

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 94/336 (27%), Gaps = 76/336 (22%)

Query: 16  CTASVAQKVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
              S  +++ L+++NI          G  L  +  +   +    + Q+      D++ LQ
Sbjct: 14  AAQSSPRQISLMTFNILAPCYFRH--GGLLESDFEQVYVTRAQEIVQFIHKQCCDVICLQ 71

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E     +  ++F                H+ +         +A+     ++  Q    + 
Sbjct: 72  EYWFNQSYERIFHSAFQHS------HTIHTIKRPGIKQD-GLAILVNKQKLDIQFVNPIQ 124

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A D  +         L ++   +   +++ HL                  +   Q Q + 
Sbjct: 125 AGDRVAMMM-----HLTLKQPYQSFLLINSHLTFPHG--------QEYKEIRLSQIQLVL 171

Query: 193 DWITQKKESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-AN 248
           + +    E      P ++ GDFN       +ND   + +  N     F           +
Sbjct: 172 NSVQGYMEQHNLQVPVLLCGDFN------DHNDPVHQKVLDNGYRSVFEVVHGREARITH 225

Query: 249 KNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIK--------------------- 286
            N +N+   +D+      + +   + +F       D +                      
Sbjct: 226 CNHKNREVGVDFIFASGLSTENGKKSTFQLYPLCCDLLPRHLPDTARLKRPSFGHDWSTI 285

Query: 287 -------------------SRGKRLSDHCPISIDYD 303
                                   LSDH P+   +D
Sbjct: 286 ECPLEMPLEQCKETHEQLVDYWSLLSDHRPLLAIFD 321


>gi|329769127|ref|ZP_08260548.1| hypothetical protein HMPREF0433_00312 [Gemella sanguinis M325]
 gi|328839473|gb|EGF89050.1| hypothetical protein HMPREF0433_00312 [Gemella sanguinis M325]
          Length = 264

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 85/297 (28%), Gaps = 54/297 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76
           ++L++ N++  L                     +L +       D++ +QE+        
Sbjct: 1   MKLLTINVHSWLENN------------QLEKLDILAKTIVEKKYDVIAMQEVNQLINSEN 48

Query: 77  ------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                  +   K+          S             +     +A+  K      + +  
Sbjct: 49  VYSNIKKDNFGKMLLDKINSYGESDYSYYWTYSHIGFDKYEEGLAILAKGKVCDVEDFYC 108

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              +D      +R+ +++ +EIN + I     H+      D                   
Sbjct: 109 TSHQDI-HSISSRKILKVTLEINNQTIEFYSCHMNLPTCEDENIREN------------- 154

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
           L + +    +S +  +  GDFN        + +    +   D+     K+ D        
Sbjct: 155 LYNLVNHTDDSNLK-IFMGDFNTDYFNQKKDYNMIIEMGLFDTYEMAQKKDDGVTVYKNI 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  ++  NK  +DY   ++          F+   Y           +SDH  + +  
Sbjct: 214 SGWEDSMNKKKLDYIFSNRELNVTESSVIFNNTNYPI---------ISDHNGLEVTI 261


>gi|54308439|ref|YP_129459.1| hypothetical protein PBPRA1246 [Photobacterium profundum SS9]
 gi|46912868|emb|CAG19657.1| Hypothetical protein PBPRA1246 [Photobacterium profundum SS9]
          Length = 388

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/365 (10%), Positives = 91/365 (24%), Gaps = 84/365 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            Q +R+  +N++  SE     + K +       ++ L    +++  D++ L E       
Sbjct: 20  TQTLRVAMFNVSM-SEPVSGQILKQTANAENKRFSKLAAIIQSVRPDVLLLCEFDHPGGG 78

Query: 81  AKVFPKNTWCIFYSTERLINHSK----------------------------------RDS 106
                   +   Y       H                                       
Sbjct: 79  GDDGALANFRRHYLAVPQHEHVGIEYLYQYCPPSNTGLLSPFDLNSDGVISLPEDGLGFG 138

Query: 107 NNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFS--------RAGNRRAVEL 148
            +  H +  +  +             +L +  P     + F         R  ++  + +
Sbjct: 139 EHHGHFSFVILSRYPIQVDQIRSWQHLLWRDMPEHCIPEGFYSEQAQSVLRLSSKNHIVV 198

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQKKESL---- 202
            +++N + I +L  H     F    +     +   L      +   D++           
Sbjct: 199 PIDVNNQVIHLLCCHPTPPVFDGEEKRNARRNHDELRLVTDIINNADYLVDDNGKNGGLS 258

Query: 203 --VPFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
               FV+ GD N                 + + I+ + S      +              
Sbjct: 259 KADSFVVLGDLNADSADGDGIKAAIQGLIYHRRINRSVSAGTLTPKSLGGRFHRPWQPRS 318

Query: 255 IP-----------IDYFVMDQNAYKFLIQESFSE------ILYNEDDIKSRGKRLSDHCP 297
                        +DY +   +         + +       L   +  K R +  SDH  
Sbjct: 319 GRSNEWTHLSGLRLDYVLPSVDLSVKQTGVFWPDKKDPLRHLITNEKGKERAQDGSDHRL 378

Query: 298 ISIDY 302
           + +D 
Sbjct: 379 VWVDL 383


>gi|332669377|ref|YP_004452385.1| endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484]
 gi|332338415|gb|AEE44998.1| Endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484]
          Length = 220

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 76/280 (27%), Gaps = 66/280 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+++N+  L                  D   + Q  +    D++ +QE        + 
Sbjct: 1   MRLMTYNVKGL----------------QLDGRAVAQVVRQARPDVLAVQEPP------RG 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P     +     R       +      TA+ V          +  L   + +      R
Sbjct: 39  LPGRW-RVRRFARRAGLRVVVNGRGSRTTALLVAPGLHVSHAHALRLPWREGTVR----R 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A    VE     + V  +HL                    +Q  + L   +        
Sbjct: 94  GAAVARVE----GVVVAAVHLSLV-------------RDERAQHLELLLRHLA--AAPPA 134

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+ GD N   +    +      +D                     +   + ID  ++D
Sbjct: 135 PRVVLGDLNEPPDGPAWHRLLEGLVDAC----------PDGPPTYPAVDASLRIDAVLVD 184

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +           +++           R SDH P+ +D +
Sbjct: 185 PSLTVRSAAVHDDDLVL----------RASDHRPLVVDVE 214


>gi|307286889|ref|ZP_07566969.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0109]
 gi|306502014|gb|EFM71301.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0109]
 gi|315165105|gb|EFU09122.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1302]
          Length = 351

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 82/316 (25%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFSIKGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKNEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|229160214|ref|ZP_04288213.1| hypothetical protein bcere0009_10090 [Bacillus cereus R309803]
 gi|228623175|gb|EEK80002.1| hypothetical protein bcere0009_10090 [Bacillus cereus R309803]
          Length = 342

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/328 (11%), Positives = 89/328 (27%), Gaps = 43/328 (13%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKR--TTSDYTLLRQYA---- 61
           +    VP +      +  ++WNI    +     +     +    T      L        
Sbjct: 22  MFKHCVPFSPESNSNITFLTWNIYQGFNVTPLFAAPPKLIPEVVTQVFRQFLATNFPVRA 81

Query: 62  -------KNLDADIVFLQEMGSYNAVAKVFPKNTWCI--------------FYSTERLIN 100
                   +   D++ LQE      V   F   T+                +       N
Sbjct: 82  KAIAKAIASEKPDLLGLQEAVLIKLVIPTFGTVTYDFIDILLEALEEQGLKYEVAALNNN 141

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                 +++ +  +   +++  ++ +++ L    D   +        L + + G+   +L
Sbjct: 142 AKGELPDSNGNL-VQFLERDAILIHKNHKL----DIIGKQEANFQTNLTIPLAGQPFTIL 196

Query: 161 DIHLKSFCFLDS---LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
                    +D             S+ + +     + +     + +P +I GD N   N 
Sbjct: 197 RGWSSIDVKIDEQIFRMINTRLDPSVEAIRNAQALEILQGPANTPLPVIITGDLNSPPNS 256

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA---NKNLRNKIPIDYFVMDQNAYKFLIQES 274
             NN           + +       +  +    N        IDY +             
Sbjct: 257 STNNLFIIAGFKDAWNTVGKGLGLTAEQSPDLLNAVSLLNQRIDYILFKNG----WEPIE 312

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +  ++ +  + G   SDH  +    
Sbjct: 313 AELVGESQKNRTNTGLWPSDHAGVFASL 340


>gi|149033629|gb|EDL88427.1| apurinic/apyrimidinic endonuclease 1, isoform CRA_b [Rattus
           norvegicus]
          Length = 294

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 72/311 (23%), Gaps = 97/311 (31%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 52  TSASGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 96

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       + +     S ++  +     +  R+  ++V      +  A 
Sbjct: 97  KCSE--NKLPAELQELPGLTHQYWSAPSDKEGYSG--VGLLSRQCPLKVSYGIAYVPNAG 152

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R   R                                          +  + L   
Sbjct: 153 RGLVRLEYR----------------------------------QRWDEAFRKFLKDLA-- 176

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 177 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGEMLQAVPLADSFR 230

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 231 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 281

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 282 --GSDHCPITL 290


>gi|12247526|gb|AAG49922.1|AF311054_1 APEX [Rattus norvegicus]
          Length = 289

 Score = 66.1 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 72/311 (23%), Gaps = 97/311 (31%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 47  TSASGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 91

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+  +       + +     S ++  +     +  R+  ++V      +  A 
Sbjct: 92  KCSE--NKLPAELQELPGLTHQYWSAPSDKEGYSG--VGLLSRQCPLKVSYGIAYVPNAG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R   R                                          +  + L   
Sbjct: 148 RGLVRLEYR----------------------------------QRWDEAFRKFLKDLA-- 171

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 172 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGEMLQAVPLADSFR 225

Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               +   A                  +DYF++  +    L                   
Sbjct: 226 HLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 276

Query: 290 KRLSDHCPISI 300
              SDHCPI++
Sbjct: 277 --GSDHCPITL 285


>gi|327474509|gb|EGF19914.1| RgfB protein [Streptococcus sanguinis SK408]
 gi|327490066|gb|EGF21854.1| RgfB protein [Streptococcus sanguinis SK1058]
          Length = 271

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 67/277 (24%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNELAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +N    ++   L+   +       R+ +  
Sbjct: 78  LAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREV--LVSEANDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E++G+ + +   HL  +      E                      +  ++    V+ 
Sbjct: 136 ETEVDGQLLTIASCHLSWWDKGFQGEWAKLE----------------EELLKAESSLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHTVAKEAIGEATVEGTIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|293382574|ref|ZP_06628508.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis R712]
 gi|293387804|ref|ZP_06632346.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis S613]
 gi|312906818|ref|ZP_07765815.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 512]
 gi|312978927|ref|ZP_07790653.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 516]
 gi|291080122|gb|EFE17486.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis R712]
 gi|291082779|gb|EFE19742.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis S613]
 gi|310627072|gb|EFQ10355.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 512]
 gi|311288364|gb|EFQ66920.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 516]
          Length = 351

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 82/316 (25%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|256960214|ref|ZP_05564385.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Merz96]
 gi|256950710|gb|EEU67342.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Merz96]
          Length = 358

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 82/316 (25%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 61  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 120

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 121 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVE-SGLLTLSNEKIT 179

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 180 EAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEG------- 232

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 233 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 290

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 291 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 346

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 347 --------DHQPVKME 354


>gi|167579454|ref|ZP_02372328.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           thailandensis TXDOH]
 gi|167617551|ref|ZP_02386182.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           thailandensis Bt4]
 gi|257140578|ref|ZP_05588840.1| endonuclease/exonuclease/phosphatase [Burkholderia thailandensis
           E264]
          Length = 270

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 79/306 (25%), Gaps = 66/306 (21%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +     VA ++  VSWN++      G + W             +R + ++  ADI FLQE
Sbjct: 9   LAEPLPVANEITAVSWNLHKGRSPLGFTAWN-----------AMRNWVESTHADIYFLQE 57

Query: 74  MGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             +                      ++      I ++ +  I               A+ 
Sbjct: 58  AMARRMPRPVLASGFGTPMTEPADDIWHCQATEIAHALDWQIALGPNVFKPSWRHGNAIL 117

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENT 176
             +   L   + +        R   R  +     + G   + +L  HL            
Sbjct: 118 SPHPLDLGGRWDISA-----HRFERRGLLVARATLGGGAPVTLLCAHLALT--------- 163

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                +   +Q  W+  WI +   +  P V+AGDFN   N           +     L  
Sbjct: 164 ----RAARLRQMHWIAHWIERNAGAG-PLVLAGDFNDWRNDSIP-------LFGEIGLSE 211

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                             + +D   +                             LSDH 
Sbjct: 212 VATLLGESGRTFPAFSPALALDKMFVRGMTPLEWRAPG------------DETAWLSDHL 259

Query: 297 PISIDY 302
           P     
Sbjct: 260 PYVARL 265


>gi|218780428|ref|YP_002431746.1| endonuclease/exonuclease/phosphatase [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761812|gb|ACL04278.1| Endonuclease/exonuclease/phosphatase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 389

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/347 (9%), Positives = 86/347 (24%), Gaps = 80/347 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNA 79
           ++ + L +WNI    +        N   R    +  + +       DI+ +QE+  +   
Sbjct: 40  SESLILGTWNIRNFDDDR-----FNYGPRMEESFYYIAEIMSRF--DILAVQEICENLAP 92

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-------RVLQQSYPLLG 132
           + ++     +                  N         K  V        ++     L+ 
Sbjct: 93  LDRLMHHLGYQY--DYIVTDVTHSGLGGNRERLGFVYDKDKVKFKGVAGELVLPDKMLIS 150

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                 R   R       +    K     +H+             S + +   ++ + + 
Sbjct: 151 EAADKGRQFARTPFGCQFQSGWFKFLFSTVHIYYGSAST-----KSQAYARRVEEIKAVA 205

Query: 193 DWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            +++++ + S    ++ GDFN         D   K  +   ++         R      +
Sbjct: 206 KYLSKEAKMSDANQILVGDFNILEPGSKGFDALEK--NGFTAVRNRMGSNRDRTKYYDQI 263

Query: 252 RNKIPI-----------DYFV------MDQNAYKFLIQESFSEILYN------------- 281
             +              D            + ++         +                
Sbjct: 264 SFRSRKNEVKLLEPKREDRVFQFFDSVYRPDDFETYKPVIQERLKAKLNIAKADLAKATS 323

Query: 282 -------------------------EDDIKSRGKRLSDHCPISIDYD 303
                                    E   + R  ++SDH P+ ++ +
Sbjct: 324 KKKREKAENQIKAIEAARKSDASLEEYYGEWRTFQMSDHLPLWVELE 370


>gi|89076503|ref|ZP_01162817.1| Exodeoxyribonuclease III [Photobacterium sp. SKA34]
 gi|89047821|gb|EAR53417.1| Exodeoxyribonuclease III [Photobacterium sp. SKA34]
          Length = 268

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/274 (11%), Positives = 70/274 (25%), Gaps = 47/274 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---------FPKNTWCIFY--------S 94
               ++ +     D D++ LQE+      + +            + +             
Sbjct: 18  EKLDIVAKAIIEQDCDVIALQEVNQRYDSSIINASTVSNFPVHSDNYAYLLQQRLLVLGH 77

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
              L       S +     +A   +   +  Q   L    D       R    + + +  
Sbjct: 78  QYYLTWDFVHQSYDVYQEGLAFLSREPVIEHQVIDLNDNYDENHWKHRR---AVRITLGY 134

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           K+  +   +     + D           + S  +  L              +  GDFN  
Sbjct: 135 KEQTLDIYNCHCGWWNDVESPFQQHIERIQSCLSDRLS-------------LFLGDFNTP 181

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKF 269
            + +     +       D+      + D        +  +N    + IDY   +Q+    
Sbjct: 182 SHLVDEGYSYLIQQGFIDTYTSAQMKDDGNTVVKCIDGWQNNHEALRIDYVFSNQD---- 237

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 S   +           +SDH  + +  D
Sbjct: 238 -----VSVSSHKVIFNGDYYPIVSDHFGLIVSLD 266


>gi|314939914|ref|ZP_07847117.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0133a04]
 gi|314941542|ref|ZP_07848429.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0133C]
 gi|314953835|ref|ZP_07856698.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0133A]
 gi|314993573|ref|ZP_07858928.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0133B]
 gi|314997788|ref|ZP_07862701.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0133a01]
 gi|313588232|gb|EFR67077.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0133a01]
 gi|313591950|gb|EFR70795.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0133B]
 gi|313594170|gb|EFR73015.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0133A]
 gi|313599694|gb|EFR78537.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0133C]
 gi|313640828|gb|EFS05408.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0133a04]
          Length = 284

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 83/312 (26%), Gaps = 66/312 (21%)

Query: 22  QKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + ++ ++ N +  L  +                   L       D +++ LQE+      
Sbjct: 6   KPMKFMTLNTHSWLEPEP------------EKKLQELADKILLEDYEVIALQEINQLLES 53

Query: 81  AKVFPKNTWCI------------------------FYSTERLINHSKRDSNNDIHTAIAV 116
            +V P                                              +      A+
Sbjct: 54  EEVEPAKLMKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNAL 113

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K    L+     +           R+ +    +I+ + I+V   H   +    S    
Sbjct: 114 LAKK--TLESQVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFY- 170

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                     + + L+++     E+ VP    GDFN  ++  G        +   DS + 
Sbjct: 171 ---------FEWKNLENY---FLETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVV 218

Query: 237 FPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +E  +       +  +    K+ ID+  +          E      Y           
Sbjct: 219 ANEEGKAATVEKKIDGWEQNTEKLRIDFIFV---------PEGMQVKKYQRIFDGIDSPI 269

Query: 292 LSDHCPISIDYD 303
           +SDH  + I+ D
Sbjct: 270 ISDHYGVEIELD 281


>gi|314950241|ref|ZP_07853524.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0082]
 gi|313643380|gb|EFS07960.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0082]
          Length = 284

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 83/312 (26%), Gaps = 66/312 (21%)

Query: 22  QKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + ++ ++ N +  L  +                   L       D +++ LQE+      
Sbjct: 6   KPMKFMTLNTHSWLEPEP------------EKKLQELADKILLEDYEVIALQEINQLLES 53

Query: 81  AKVFPKNTWCI------------------------FYSTERLINHSKRDSNNDIHTAIAV 116
            +V P                                              +      A+
Sbjct: 54  EEVEPAKLMKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNAL 113

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K    L+     +           R+ +    +I+ + I+V   H   +    S    
Sbjct: 114 LTKK--TLESQVLTVSQFQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFY- 170

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                     + + L+++     E+ VP    GDFN  ++  G        +   DS + 
Sbjct: 171 ---------FEWKNLENY---FLETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVV 218

Query: 237 FPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             ++  +       +  +    K+ ID+  +          E      Y           
Sbjct: 219 ANEKGKAATVEKKIDGWEQNTEKLRIDFIFV---------PEGMQVKKYQRIFDGIDSPI 269

Query: 292 LSDHCPISIDYD 303
           +SDH  + I+ D
Sbjct: 270 ISDHYGVEIELD 281


>gi|242266576|gb|ACS91139.1| APN2 [Microsporum gypseum]
          Length = 596

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 63/305 (20%), Gaps = 71/305 (23%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV  QE  +   +    +     W  ++S   +   +S            A
Sbjct: 22  AMFDILEADIVVFQEAKIQRKDLQDDMVLVPGWDCYFSLPRQKKGYSGVVIYTRSSKCAA 81

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRA-----------GNRRAVELLVEINGKKIWVLDIHL 164
           +R +         P          A                 E+       +   L +  
Sbjct: 82  IRAEEGITGTLCPPNSSTPFRQLTASEQIGGYPSVEQMEELSEVDPTTLDSEGRCLIVEF 141

Query: 165 KSFCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------ 216
            +F  +                      L+  +    +     ++ GD N          
Sbjct: 142 PAFVLIGVYCPANRDESRDGFRLGFLSLLEARVRNLIKMGKRVILTGDLNISPAAIDSAP 201

Query: 217 ----------------YLGNNDDFWKTIDPNDSL-------------IRFPKEKDSRCNA 247
                                  F   +    S                  +   +R   
Sbjct: 202 ATERIKKNTETEEEYVSSPARRLFNGLVRRVGSTEETHDIEASPVLRDLCREFHPNRTGM 261

Query: 248 NKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDY +   +   + ++ +              G   SDHCP+
Sbjct: 262 YTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQ-----------EGLMGSDHCPV 310

Query: 299 SIDYD 303
                
Sbjct: 311 YASIS 315


>gi|242266571|gb|ACS91135.1| APN2 [Microsporum gypseum]
          Length = 596

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 63/305 (20%), Gaps = 71/305 (23%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV  QE  +   +    +     W  ++S   +   +S            A
Sbjct: 22  AMFDILEADIVVFQEAKIQRKDLQDDMVLVPGWDCYFSLPRQKKGYSGVVIYTRSSKCAA 81

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRA-----------GNRRAVELLVEINGKKIWVLDIHL 164
           +R +         P          A                 E+       +   L +  
Sbjct: 82  IRAEEGITGTLCPPNSSTPFRQLTASEQIGGYPSVEQMEELSEVDPTTLDSEGRCLIVEF 141

Query: 165 KSFCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------ 216
            +F  +                      L+  +    +     ++ GD N          
Sbjct: 142 PAFVLIGVYCPANRDESRDGFRLGFLSLLEARVRNLIKMGKRVILTGDLNISPAAIDSAP 201

Query: 217 ----------------YLGNNDDFWKTIDPNDSL-------------IRFPKEKDSRCNA 247
                                  F   +    S                  +   +R   
Sbjct: 202 ATERIKKNTETEEEYVSSPARRLFNGLVRRVGSTEETHDIEASPVLRDLCREFHPNRTGM 261

Query: 248 NKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             IDY +   +   + ++ +              G   SDHCP+
Sbjct: 262 YTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQ-----------EGLMGSDHCPV 310

Query: 299 SIDYD 303
                
Sbjct: 311 YASIS 315


>gi|146283435|ref|YP_001173588.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501]
 gi|145571640|gb|ABP80746.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501]
          Length = 232

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 64/258 (24%), Gaps = 54/258 (20%)

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V LQE+ + +A                 R   +            +A+  ++   L+  
Sbjct: 1   MVCLQELKAQDA----------DFPIDDIRGAGYGAIWHGQKSWNGVAILARDSEPLEIR 50

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             L G  D         AV  ++        V  ++L +       +  Y  +       
Sbjct: 51  RGLPGDPDDSHSRYLEAAVHGVI--------VASLYLPNGNPQPGPKFDYKLA------W 96

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPND 232
            + L +       S  P V+AGD+N                           ++ +    
Sbjct: 97  FERLIEHAAGLLASGHPVVLAGDYNVVPTDEDIYNPRSWRKDALLQPESRACYERLLAQG 156

Query: 233 SLIRFPKEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                  +             +          ID+ ++  +    L            D 
Sbjct: 157 WTDALRAQFPDEPVYTFWDYFRQHWQKNSGLRIDHLLLSPDLAPCLQTAGV-------DR 209

Query: 285 IKSRGKRLSDHCPISIDY 302
                +  SDH P  +  
Sbjct: 210 WVRGQEHASDHAPTWVSL 227


>gi|317032663|ref|XP_001394168.2| sphingomyelinase family protein [Aspergillus niger CBS 513.88]
          Length = 461

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 72/324 (22%), Gaps = 60/324 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ + N   L       + K+   R       L     +   +IV LQE  +      +
Sbjct: 18  IRIFTLNCWGL-----KYIAKHRHARLAEIGRQLA--IASPPPEIVGLQECWTQQDYESI 70

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFS 138
                      T  ++ + K          +A+  K        +         A     
Sbjct: 71  RQ--------QTRHILPYGKFYFGGIWGAGLAILSKWPIEESSMFAYPLNGRPTAFFRGD 122

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +      V        V ++           E   S  C   + QA  +   +   
Sbjct: 123 WYVGKGVACARVRFGPGVQDVAEVFCTHLHAPYEREPNDSYIC-HRTAQAWEIAKLMRGA 181

Query: 199 KESLVPFVIAGDFNRKINY-------------LGNNDDFWKTIDPNDSLIRFPKEKDSR- 244
            E     +  GDFN   +                      K I   +  I          
Sbjct: 182 AERGHLVIGLGDFNMLPSSFVLHPDSSVGAAIDPVEQKRGKPIPSAEYNITENGATCDGK 241

Query: 245 CNANKNLRNKI---------------------PIDYFVMDQNAYKFLIQESFSEILYN-- 281
            N  +  +                         +DY  +    Y  L       +     
Sbjct: 242 FNTWRWSKEDQKRLEKGQDIVVDKDAPCPKGKRLDYIFVGDGNYPPLYPAPRWSVESTRL 301

Query: 282 --EDDIKSRGKRLSDHCPISIDYD 303
              +   +    LSDH  +     
Sbjct: 302 SMTERHPTLRCSLSDHFAVEAVIT 325


>gi|114603887|ref|XP_518159.2| PREDICTED: CCR4-NOT transcription complex, subunit 6 isoform 2 [Pan
           troglodytes]
          Length = 526

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/351 (10%), Positives = 91/351 (25%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADIV LQE+ +    +
Sbjct: 158 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYS 217

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 218 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 277

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 278 NSEGSEAMLNRVMTKDNIGVAVLLELRKESIEMPSGKPHLGTEKQLILVANAHMHWDPEY 337

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINY--------- 217
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 338 SDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 397

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKI 255
               N+ DF +              K+                         N     K 
Sbjct: 398 GVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYTNYTFDFKG 457

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 458 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 508


>gi|312882581|ref|ZP_07742321.1| hypothetical protein VIBC2010_09472 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369741|gb|EFP97253.1| hypothetical protein VIBC2010_09472 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 270

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 84/293 (28%), Gaps = 31/293 (10%)

Query: 14  VPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           + C+        + + SWNI    E       K S   ++     + +    LD  I+  
Sbjct: 1   MSCSDPFQHTQLLNIASWNIRYAPELVTNDAPKESFPWSSRVL-GMGKMLAELDLTILAT 59

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE            +    +       +  +    +  ++T +     +  +   + P +
Sbjct: 60  QEGNKQQLSD--LDETLPNLEMIDTHRVWSTTFFPSFFVNTELVSVVASGDLWLSNQPEV 117

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                 S A  R     LVEI G     L I++                      Q + L
Sbjct: 118 VDSKLPSSAWPRMLTWALVEIEGHNGRWLLINVHLDGTDIE--------------QVEIL 163

Query: 192 KDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
              +    ++  P   ++ GDFN  +     +  +           ++ ++     +   
Sbjct: 164 HRLVFGLVKTHTPTYTILCGDFNASLASETTDPAYRSLFS---YFQKYKQQVTYNGHGKA 220

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  ID+ +   N             L   +    +   LSDH  + ++ 
Sbjct: 221 QSGKDWDIDWILTSSNLPLSYQ-------LRRSEHSALQDLYLSDHDLVRLEL 266


>gi|268556784|ref|XP_002636381.1| Hypothetical protein CBG08683 [Caenorhabditis briggsae]
          Length = 329

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 87/342 (25%), Gaps = 56/342 (16%)

Query: 5   YVLALVFFL-------VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           +++ L   L          +      +RL+++NI              S K   +    +
Sbjct: 1   FLVVLSILLQLVGSTYFTGSERSQNGIRLMTFNIW------------QSGKNVENGQQKI 48

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
            ++   ++ DIV LQE  +       +   + W          + +    +  +      
Sbjct: 49  AKHILMVNPDIVALQETYANVTKNLTMMLGHPWVAVERNHEYPDTAILTRHVIVPNTNLS 108

Query: 117 RK-----KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
                  K +               ++  G   A   LV    + +   +  + +     
Sbjct: 109 TSGGVGVKIMLRTGYMVHFWSLHLDYTSYGPYAANNKLVNRIDQILAGENTGMNNIGNHK 168

Query: 172 SLENTYSPSCSLLSQQ-AQWLKDWITQKKESLVPFVIAGDFNRKINYL------------ 218
           S+ + Y     +        +K W+   K   VP  IAGDFN   +              
Sbjct: 169 SIVSEYGRGPQIYEILTLPMMKKWME--KSDDVPIFIAGDFNGPSHLDWTEQTKKIHGDW 226

Query: 219 ----------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
                               + +  +  N  +      K +          +  ID+   
Sbjct: 227 VIRWPATKELEDRGFTDTYREIYPNVLTNPGITWSTVNKFNPEWNYTIPEPQDRIDFLFY 286

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   I                     SDH  +  DY F
Sbjct: 287 KGPVVADQIMAYSGCEKPKRIPFHEHNDYPSDHFAVFADYTF 328


>gi|146329467|ref|YP_001209345.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A]
 gi|146232937|gb|ABQ13915.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A]
          Length = 260

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 76/302 (25%), Gaps = 74/302 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ SWN+N+L+                     +  Y KN D DI+ LQE+   +A     
Sbjct: 3   KIGSWNVNSLN----------------VRKNQVIDYFKNNDLDILGLQELKQEDAAIDKK 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                  +                  +  +A+  K                 +     R 
Sbjct: 47  AFLDAGWYL----------ETFGQKTYNGVALLSKTPPENVVR-----GIPDYHDPAARA 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +  +   + VL++++ +   +   +  Y        +  Q ++ +I         
Sbjct: 92  -----IAASYGAMRVLNLYVPNGKAVFDEKFHYK------LEWLQHVQRYIAHLCAHYPH 140

Query: 205 FVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            V+ GDFN                                             +    + 
Sbjct: 141 LVVIGDFNIAPTDRDVFDPRQFQEKLLCSDAERRALHALFALGLRDSFREMHPEKTQFSW 200

Query: 249 KNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            + R           ID  ++               I  + D    + +R SDH  +   
Sbjct: 201 WDYRYNAWQRNLGLRIDLVLISSKL---------RLIAADIDTQTRQNERPSDHSVVWAQ 251

Query: 302 YD 303
            +
Sbjct: 252 VE 253


>gi|29653648|ref|NP_819340.1| exodeoxyribonuclease III [Coxiella burnetii RSA 493]
 gi|29540910|gb|AAO89854.1| exodeoxyribonuclease III [Coxiella burnetii RSA 493]
          Length = 259

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 83/307 (27%), Gaps = 80/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +R+++ N+N +        +                + K   ADIV LQE  +   +   
Sbjct: 1   MRIITLNLNGIRAAARRGFF---------------DWLKRQKADIVCLQETKACLEITNG 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    +  +Y       +S           I  R+K  RV  +           +   
Sbjct: 46  DQFHPKGYHCYYHDAEKSGYSG--------VGIYCREKPDRVTTR------LGWEHADKE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      ++ +   + V  +++ S    +  +        +           +     S
Sbjct: 92  GRY-----IQADFGSLSVASLYMPSGTTGEHRQ-------KIKFDFMDRYMKRLKNIVHS 139

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              F+I GD+N                             +       +  F        
Sbjct: 140 KRSFIICGDWNIVHKEIDIKNFKSNQKYSGCLPEERAWLDEVFTKVGLVDAFRVVNQKP- 198

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +      ++           IDY V+  +    +  E              + KR SDH 
Sbjct: 199 DQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSERI-----------YKDKRFSDHA 247

Query: 297 PISIDYD 303
           P+ IDY+
Sbjct: 248 PLIIDYE 254


>gi|14389301|ref|NP_112650.1| sphingomyelin phosphodiesterase 2 [Rattus norvegicus]
 gi|20138814|sp|Q9ET64|NSMA_RAT RecName: Full=Sphingomyelin phosphodiesterase 2; AltName:
           Full=Lyso-platelet-activating factor-phospholipase C;
           Short=Lyso-PAF-PLC; AltName: Full=Neutral
           sphingomyelinase; Short=N-SMase; Short=nSMase
 gi|9757704|dbj|BAB08219.1| neutral sphingomyelinase [Rattus norvegicus]
 gi|60552699|gb|AAH91139.1| Sphingomyelin phosphodiesterase 2, neutral [Rattus norvegicus]
 gi|149046987|gb|EDL99735.1| sphingomyelin phosphodiesterase 2, neutral, isoform CRA_b [Rattus
           norvegicus]
          Length = 422

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 73/287 (25%), Gaps = 33/287 (11%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           +  L+  +   L K+   R       L  +      D+  L+E+ S      +       
Sbjct: 11  VFNLNCWDIPYLSKHRADR----MKRLGDFLNLESFDLALLEEVWSEQDFQYL------K 60

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF---SRAGNRRAVE 147
              S      H  R         +  R     ++Q  Y L G    F        +    
Sbjct: 61  QKLSLTYPDAHYFRSGIIGSGLCVFSRHPIQEIVQHVYTLNGYPYKFYHGDWFCGKAVGL 120

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           L++ ++G  +     HL +               +    QA  L  +I    +     ++
Sbjct: 121 LVLHLSGLVLNAYVTHLHA-----EYSRQKDIYFAHRVAQAWELAQFIHHTSKKANVVLL 175

Query: 208 AGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----------- 255
            GD N     LG      W  +          K  +  C                     
Sbjct: 176 CGDLNMHPKDLGCCLLKEWTGLRDAFVETEDFKGSEDGCTMVPKNCYVSQQDLGPFPFGV 235

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            IDY +  +    F I      +          G   SDH  +    
Sbjct: 236 RIDYVLY-KAVSGFHICC--KTLKTTTGCDPHNGTPFSDHEALMATL 279


>gi|116182486|ref|XP_001221092.1| hypothetical protein CHGG_01871 [Chaetomium globosum CBS 148.51]
 gi|88186168|gb|EAQ93636.1| hypothetical protein CHGG_01871 [Chaetomium globosum CBS 148.51]
          Length = 574

 Score = 65.7 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/341 (13%), Positives = 73/341 (21%), Gaps = 74/341 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAV 80
           ++ LV+ N   L         K   K      T + +          IV LQE  +    
Sbjct: 7   EINLVTLNCWGL---------KYISKLRRERLTEIGRQLATASPQPHIVALQECFTQEDY 57

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +  +  +                +      AI  R          YPL G   +F R 
Sbjct: 58  QSIRHEVRF------ILPYGKFYHSAAFGGGLAILSRWPIEESTMYRYPLNGRPTAFWRG 111

Query: 141 GN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                +      +        V+++                      + Q+  +   +  
Sbjct: 112 DWYVGKGIACAKIRYGPAAKQVVEVFNTHTHAPYEGGKPNDSYLCHRTAQSWEMAKLLRG 171

Query: 198 KKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCN--- 246
             E     +  GDFN                  D W+T+ P+ SL       +   +   
Sbjct: 172 AAERGHLVLAMGDFNMIPMSREYQLITGLAPVSDVWRTLHPDSSLGPSHHPAEEARHRPV 231

Query: 247 ----------------ANKNLRN-------------------------KIPIDYFVMD-- 263
                                R                             +DY      
Sbjct: 232 PTAEFNIQENGAASDGPYNTWRWTKAQQKLLGPGKPPVTVSPDTPDPLGKRLDYIFASSG 291

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    E     +         G  LSDH  I     F
Sbjct: 292 DAMALGGTWEVEQANVGMMMRHPELGCSLSDHFSIEATLSF 332


>gi|153009983|ref|YP_001371198.1| endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC
           49188]
 gi|151561871|gb|ABS15369.1| Endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC
           49188]
          Length = 337

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 77/316 (24%), Gaps = 72/316 (22%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT--------- 51
           M R+  + L+F ++  + +V    R      + LS   G    +    R           
Sbjct: 61  MRREAAMLLLFAVMALSTTVGAA-R------DFLSGSTGAHAQEQGGARYRLVQINLRED 113

Query: 52  -SDYTLLRQYAKNLDADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
             +   + Q       D++  +E        +  +     + +  + +            
Sbjct: 114 NPEPKRILQMIAREKPDVITYEEASDQWTKWLTILQGSYPYHLNCADDPNTW-------- 165

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
                + +  K           +G                 +   G  + V  +H     
Sbjct: 166 ----GVGILSKRPFSEDAQTACVGDG---------LLAIAPINFGGTTVHVAALHFSWPW 212

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                             Q   L+    + ++   P V+AGDFN              + 
Sbjct: 213 P---------------RWQPYQLRYIEPELQKLKGPLVVAGDFNAAPWSNAVRRVERASG 257

Query: 229 DPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             + + I                +     ID  ++        +                
Sbjct: 258 TRHMTGIGGTWMTHLLPVKLAPYIGLP--IDQILVSPEIGGAEVSA-------------- 301

Query: 288 RGKRLSDHCPISIDYD 303
           R    SDH P+ +D+ 
Sbjct: 302 REDAGSDHLPVRLDFS 317


>gi|149052413|gb|EDM04230.1| similar to CCR4, isoform CRA_a [Rattus norvegicus]
          Length = 382

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 14  FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 73

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 74  FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 133

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 134 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 193

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 194 SDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTG 253

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 254 GVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 313

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 314 IIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 364


>gi|148701791|gb|EDL33738.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_b [Mus
           musculus]
 gi|149052416|gb|EDM04233.1| similar to CCR4, isoform CRA_d [Rattus norvegicus]
          Length = 457

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 89  FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 148

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 149 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 208

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 209 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 268

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 269 SDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTG 328

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 329 GVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 388

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 389 IIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 439


>gi|148701793|gb|EDL33740.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_d [Mus
           musculus]
          Length = 524

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 156 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 215

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 216 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 275

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 276 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 335

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 336 SDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTG 395

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 396 GVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 455

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 456 IIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 506


>gi|34980912|gb|AAH57190.1| Cnot6 protein [Mus musculus]
          Length = 374

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 6   FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 65

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 66  FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 125

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 126 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 185

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 186 SDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTG 245

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 246 GVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 305

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 306 IIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 356


>gi|37360278|dbj|BAC98117.1| mKIAA1194 protein [Mus musculus]
          Length = 376

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 8   FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 67

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 68  FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 127

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 128 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 187

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 188 SDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTG 247

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 248 GVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 307

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 308 IIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 358


>gi|13471433|ref|NP_102999.1| hypothetical protein mll1402 [Mesorhizobium loti MAFF303099]
 gi|14022175|dbj|BAB48785.1| mll1402 [Mesorhizobium loti MAFF303099]
          Length = 280

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 83/245 (33%), Gaps = 51/245 (20%)

Query: 7   LALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVK----------RTT 51
           +      + C+ ++A       +RL ++N+  L  +   S ++N +           R+ 
Sbjct: 30  ILACGLAILCSGALAGKGQGMSLRLATFNVENLMNRFDFSGYRNQLNEDRTLALFDIRSE 89

Query: 52  SDYTLL--RQYAKNLD--------------ADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95
           ++Y +L   +     D              ADI+ +QE+ +  A+        + +    
Sbjct: 90  AEYKMLEQARAIAQSDDTRQLTALAIAATRADIICMQEVDNIEALKAFEYGYLFKMVGQG 149

Query: 96  ERLINHSKRDSNNDIHTAIAVR------KKNVRVLQQSYPLLG--------------AKD 135
            R    +  + +  I  A+ +R      +    V   S+  +                  
Sbjct: 150 YRQKYTTAGNDSRGIDVAVMMRNETAQGQPIEFVRMTSHAYVTYEQFGLHTPELATLGSQ 209

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +  R   R  +E+ + + G  + +  +H KS     +  +    +  +   +AQ ++  +
Sbjct: 210 ANERIFRRDCLEVDITVGGVPLTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIM 269

Query: 196 TQKKE 200
               +
Sbjct: 270 PPTSD 274


>gi|62078445|ref|NP_001013878.1| CCR4-NOT transcription complex subunit 6 [Rattus norvegicus]
 gi|46395892|sp|Q8K3P5|CNOT6_MOUSE RecName: Full=CCR4-NOT transcription complex subunit 6; AltName:
           Full=CCR4 carbon catabolite repression 4-like; AltName:
           Full=Carbon catabolite repressor protein 4 homolog;
           AltName: Full=Cytoplasmic deadenylase
 gi|81884475|sp|Q6AXU9|CNOT6_RAT RecName: Full=CCR4-NOT transcription complex subunit 6; AltName:
           Full=CCR4 carbon catabolite repression 4-like; AltName:
           Full=Carbon catabolite repressor protein 4 homolog;
           AltName: Full=Cytoplasmic deadenylase
 gi|50927394|gb|AAH79308.1| CCR4-NOT transcription complex, subunit 6 [Rattus norvegicus]
 gi|56205896|emb|CAI23937.1| CCR4-NOT transcription complex, subunit 6 [Mus musculus]
 gi|148701792|gb|EDL33739.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_c [Mus
           musculus]
          Length = 557

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 489 IIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 539


>gi|159899198|ref|YP_001545445.1| endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159892237|gb|ABX05317.1| Endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 304

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 83/314 (26%), Gaps = 74/314 (23%)

Query: 2   IRKYVLALVFFLVPC----TASVAQK---VRLVSWNI--NTLSEQEGVSLWKNSVKRTTS 52
           +    + L++  +                +RL+SWN+    L+  +              
Sbjct: 54  VMAIFIGLIWLWLYAERWLPQPRPDTTPALRLLSWNVAGWNLNSVD-------------- 99

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
               + +   +   D++ LQE+        V          +++      +  S      
Sbjct: 100 ----ILRVIDDEQPDLIALQEVD-------VGLGKPLQTALASKYPYVEFRPASGAAQPA 148

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +A+  K    L                  RRA    V+   + + ++++H++       
Sbjct: 149 DLALWSKWPFALIHP--------CAYWQCYRRAY--RVQHPQQPLILVNVHIEHSPIRWL 198

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                             +   I    ++  P ++AGDFN            +  ++   
Sbjct: 199 RFEREREE--------AAIGQMIADFGQTTEPVLLAGDFN-----TVEQQAGYAALNTVW 245

Query: 233 SLIRFPKEKDSRCNA--NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +      +          + IDY   +                         G 
Sbjct: 246 GDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIR---------------PIQLETGA 290

Query: 291 RLSDHCPISIDYDF 304
            +SDH  +   +DF
Sbjct: 291 GVSDHRYLIGAFDF 304


>gi|289580690|ref|YP_003479156.1| endonuclease/exonuclease/phosphatase [Natrialba magadii ATCC 43099]
 gi|289530243|gb|ADD04594.1| Endonuclease/exonuclease/phosphatase [Natrialba magadii ATCC 43099]
          Length = 261

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 70/281 (24%), Gaps = 43/281 (15%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA------KV 83
           N+        +             +  L    +    D+V L E+   +         + 
Sbjct: 16  NVLGGYVPPPIGATLGDTITERQAFRRLVSLIERERPDVVSLLEVDRGSHRTITDGQFQT 75

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +      + +  + +   DS          +  N  + + +          S    R
Sbjct: 76  LRDSLQRRGLAYDGDVANKYGDSGLVQSLPFFGQLGNAVLSRANRNRTIVPHYLSAGRKR 135

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E+ +  +   + +  +HL                     +Q   L   I  +     
Sbjct: 136 LVLEVELAAD---VVLFMVHLSLGT-------------RSRGRQLAELATLIRDRAG-GR 178

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-IDYFVM 262
             V+ GDFN        ++          +L      +        +       +D F  
Sbjct: 179 EVVVTGDFNTFAATDELHE-----FTDQAALELQVPGETVPARPFDDWLVGSRSLDLFCC 233

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +               +         +LSDH PI ++ D
Sbjct: 234 SPSL--------------DVGRCDVLDVQLSDHRPIVLELD 260


>gi|221508748|gb|EEE34317.1| endonuclease/exonuclease/phosphatase domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1245

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 10/196 (5%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + +VS+N   L  +        +   T    + +     + ++DI+ LQE+       
Sbjct: 453 DSINIVSFNAGLLEYRLCGIQIYQNPPFTRRRLSHIPISLLDTNSDIICLQEVYDDLHAD 512

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +               +          +H  + V  +      Q +P     +     G
Sbjct: 513 FLVDSMR-----HVFPYVGRRTSGGRFALHNGLMVLSRFPIRHTQFHPFHDVTNIERLFG 567

Query: 142 NRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           ++  +E  ++I G  +  + +IHL S               +L S + Q +         
Sbjct: 568 SKGMLECGIDIPGVGVVAIFNIHLASGAVDPESPYV----EALRSAEIQQVLSACEDAGL 623

Query: 201 SLVPFVIAGDFNRKIN 216
                V+ GD N   +
Sbjct: 624 RGEIPVVVGDLNAAPD 639


>gi|237832961|ref|XP_002365778.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211963442|gb|EEA98637.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Toxoplasma gondii ME49]
          Length = 1241

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 10/196 (5%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + +VS+N   L  +        +   T    + +     + ++DI+ LQE+       
Sbjct: 453 DSINIVSFNAGLLEYRLCGIQIYQNPPFTRRRLSHIPISLLDTNSDIICLQEVYDDLHAD 512

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +               +          +H  + V  +      Q +P     +     G
Sbjct: 513 FLVDSMR-----HVFPYVGRRTSGGRFALHNGLMVLSRFPIRHTQFHPFHDVTNIERLFG 567

Query: 142 NRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           ++  +E  ++I G  +  + +IHL S               +L S + Q +         
Sbjct: 568 SKGMLECGIDIPGVGVVAIFNIHLASGAVDPESPYV----EALRSAEIQQVLSACEDAGL 623

Query: 201 SLVPFVIAGDFNRKIN 216
                V+ GD N   +
Sbjct: 624 RGEIPVVVGDLNAAPD 639


>gi|195996619|ref|XP_002108178.1| hypothetical protein TRIADDRAFT_19413 [Trichoplax adhaerens]
 gi|190588954|gb|EDV28976.1| hypothetical protein TRIADDRAFT_19413 [Trichoplax adhaerens]
          Length = 527

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 86/332 (25%), Gaps = 80/332 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---MGSYNAV 80
           ++++ WN+N +                      ++   + L+ADI+  QE   +      
Sbjct: 1   MKILCWNVNGIRTTAYGKG-------------SIKDLLEFLNADILCFQETKLLRDQLDE 47

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +  F +     F  +   + +S   +      A I V +    V                
Sbjct: 48  SIAFVEGYNSYFSFSRGKVAYSGVATYCKTDCAPIRVEEGLSNVWAAKNADRIGHYGNIS 107

Query: 140 AGN-----------RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
             N           R  +       G+ + V++++          +       +   +  
Sbjct: 108 KFNSEELSLLDAEGRAILTEHKTDFGRNVVVINVYCP------RADPEKPERLNFKLKFY 161

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKIN-------------YLGNNDDFWKTIDPND--- 232
           + L++       +    VI GD N                    +       + P D   
Sbjct: 162 ELLQERAEALLIAGKHVVIVGDVNTSHKPIDHCEPDIKAMQNSPSCHWLDNLLIPLDSEG 221

Query: 233 ----------------SLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQ 272
                                 +++   C +             IDY + D++       
Sbjct: 222 KVDSSISAGKKFIDSFRYFYPRRKEAFTCWSTVTSARKTNYGTRIDYIIADKDL------ 275

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                + Y  +         SDHCPI  D  F
Sbjct: 276 ----VVSYFAESQIQPEIEGSDHCPIYADLKF 303


>gi|161831527|ref|YP_001596246.1| exodeoxyribonuclease III [Coxiella burnetii RSA 331]
 gi|161763394|gb|ABX79036.1| exodeoxyribonuclease III [Coxiella burnetii RSA 331]
          Length = 259

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 83/307 (27%), Gaps = 80/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +R+++ N+N +        +                + K   ADIV LQE  +   +   
Sbjct: 1   MRIITLNLNGIRAAARRGFF---------------DWLKRQKADIVCLQETKACLEITNG 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    +  +Y       +S           I  R+K  RV  +           +   
Sbjct: 46  DQFHPKGYHCYYHDAEKSGYSG--------VGIYCREKPDRVTTR------LGWEHADKE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      ++ +   + V  +++ S    +  +        +           +     S
Sbjct: 92  GRY-----IQADFGSLSVASLYMPSGTTGEHRQ-------KIKFDFMDRYMKRLKNIVHS 139

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              F+I GD+N                             +       +  F        
Sbjct: 140 KRSFIICGDWNIVHKEIDIKNFKSNQKHSGCLPEERAWLDEVFTKVGLVDAFRVVNQKP- 198

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +      ++           IDY V+  +    +  E              + KR SDH 
Sbjct: 199 DQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSERI-----------YKDKRFSDHA 247

Query: 297 PISIDYD 303
           P+ IDY+
Sbjct: 248 PLIIDYE 254


>gi|148238052|ref|NP_001085037.1| CCR4-NOT transcription complex subunit 6-like-A [Xenopus laevis]
 gi|82185098|sp|Q6IR85|CN6LA_XENLA RecName: Full=CCR4-NOT transcription complex subunit 6-like-A
 gi|47506928|gb|AAH71015.1| MGC81488 protein [Xenopus laevis]
          Length = 550

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 90/352 (25%), Gaps = 73/352 (20%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  + ++      +           +     + DADI+ LQE+ +    
Sbjct: 183 SFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMDEIISCDADIISLQEVETEQYF 242

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLGAKDS 136
               P      +       + +K  S+ +       AI  R +   ++Q+          
Sbjct: 243 TLFMPALEERGYDGFFSPKSRAKIMSDQEKKHVDGCAIFFRTEKFSLVQKHTVEFNQIAM 302

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            +  G+   +  ++  +   + VL        F  +    +  S   L   A     W  
Sbjct: 303 ANSEGSEAMLNRVMTKDNIGVSVLLEV--HKDFSGAGMKPHHSSEKQLLMVANAHMHWDP 360

Query: 197 QKK-------------------------------ESLVPFVIAGDFNRKINYLGNNDDF- 224
           +                                  + +PFV+  D N  ++         
Sbjct: 361 EYSDVKLIQTMMFVSELKSIIEKAACRPGSPTPDPNSIPFVLCADLNSLLDSGVVEYLTN 420

Query: 225 ---------WKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNK 254
                    +K +  N+ L  F     +                         N     K
Sbjct: 421 GGVADNHKDFKELRYNECLTNFNCNGKNGTPDGRITHGFQLRSAYENNLMPYTNYTFDFK 480

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIK---SRGKRLSDHCPISIDYD 303
             IDY    +     L      +  +  D+           SDH  +    +
Sbjct: 481 GVIDYIFYSKTHMDVLGILGPLDPQWMMDNNITGCPHPHIPSDHFSLLTQLE 532


>gi|47059015|ref|NP_997649.1| CCR4-NOT transcription complex subunit 6 [Mus musculus]
 gi|82178513|sp|Q5BJ41|CNOT6_XENLA RecName: Full=CCR4-NOT transcription complex subunit 6; AltName:
           Full=Cytoplasmic deadenylase
 gi|38566259|gb|AAH62950.1| CCR4-NOT transcription complex, subunit 6 [Mus musculus]
 gi|60552311|gb|AAH91632.1| Unknown (protein for MGC:98472) [Xenopus laevis]
 gi|148701790|gb|EDL33737.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_a [Mus
           musculus]
 gi|149052415|gb|EDM04232.1| similar to CCR4, isoform CRA_c [Rattus norvegicus]
          Length = 552

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 184 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 243

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 244 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 303

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 304 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 363

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 364 SDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTG 423

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 424 GVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 483

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 484 IIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 534


>gi|310831095|ref|YP_003969738.1| putative apurinic-apyrimidinic endonuclease 1 [Cafeteria
           roenbergensis virus BV-PW1]
 gi|309386279|gb|ADO67139.1| putative apurinic-apyrimidinic endonuclease 1 [Cafeteria
           roenbergensis virus BV-PW1]
          Length = 262

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/311 (10%), Positives = 80/311 (25%), Gaps = 84/311 (27%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-------MGSY 77
           ++++WNIN                +       L    +     I+ + E       +   
Sbjct: 4   KIIAWNING--------------IKAHLKKDNLFDLIETEKPHIICMGETKISCPFIDVQ 49

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           N + +      +  ++S   +            ++  A+  K   +          +D  
Sbjct: 50  NQLKEKIKGYKYR-YWSPCLVK---------KGYSGTAIFSKRKPISTYLGMNQPGEDDE 99

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            R          + +  K+ +++ ++  +    L  L+           +    L+    
Sbjct: 100 GRM---------ITLEFKEYYLIHVYTPNSGQGLVRLQYRTEEWDKNFRKYCANLQKI-- 148

Query: 197 QKKESLVPFVIAGDFNRKIN-------------------YLGNNDDFWKTIDPNDSL-IR 236
                  P +I GD N                          +       ++  D+    
Sbjct: 149 ------KPIIICGDLNVANENIDLANPSSNKKNAGFTDVERKSFKLTLTKLNLIDTFRYL 202

Query: 237 FPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +P +         +          IDYF++ +     +   +    +             
Sbjct: 203 YPTDIKYSFWTYYHNARPKNIGWRIDYFLVSEKLLPKVKDSNILTHI-----------MG 251

Query: 293 SDHCPISIDYD 303
           SDH P+ +   
Sbjct: 252 SDHAPVILKLT 262


>gi|241626053|ref|XP_002409605.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215503194|gb|EEC12688.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 383

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 85/290 (29%), Gaps = 50/290 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P        ++ ++WNI            KN + RT +    +    ++   D+VFLQE+
Sbjct: 125 PSVEQDPGTLKFITWNI-------DGIDDKNLLLRTKA----VCSIIESSGIDVVFLQEV 173

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +          + +              +  +  TA  +RK  V+            
Sbjct: 174 VPTSVKVMEQSLPGYKLL-----------VGNTVEYFTATLLRKSRVKYESHEVYPFSNT 222

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW-LKD 193
                A  R    +    N   + +L+ HL+S           +        Q +  L+ 
Sbjct: 223 -----AMGRNVTYVKASFNKWPLTLLNTHLEST----------AEFAEPRKVQLRRCLRK 267

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN-------NDDFWKTIDPNDSLIRFPKEKDSRCN 246
            I   + +    + AGD N + + L +        +D W++               +   
Sbjct: 268 CIK--EPAERSVIFAGDLNLRDSELDDLGGLPHGFEDVWESCGQRKEARYTWDMTRNDNV 325

Query: 247 ANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                 + +   D      +    L    F  I    + +K      SDH
Sbjct: 326 TWNGRFKPRCRFDRVYFKHSKPTSLKPVFFGLIGL--ERLKPHRCFPSDH 373


>gi|205373614|ref|ZP_03226417.1| exodeoxyribonuclease [Bacillus coahuilensis m4-4]
          Length = 195

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/220 (11%), Positives = 53/220 (24%), Gaps = 53/220 (24%)

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
              ++  A+  K      +   +    D    +  R      + +     +V+ ++  + 
Sbjct: 4   KKDYSGTAIFTK-----SKPLKVTYGMDEERNSEGRM-----ITLEFSDFYVVTMYTPNS 53

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------ 221
               S          L+      L            P +  GD N     L         
Sbjct: 54  KRDLSRLEERLEWEDLVQGYLDKLNQ--------KKPVIFCGDLNVAHTELDVKNDRANQ 105

Query: 222 ---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMD 263
                     +    +        +     +R +                   IDYF++ 
Sbjct: 106 GNSGFTQVEREKMNGLLDLGFTDTYRYFNPARDDQFTWWSYMKGVRERNIGWRIDYFIVS 165

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +    +      + +Y            SDHCPI ++  
Sbjct: 166 TSFMNTISNSDIHDHVY-----------GSDHCPIVLELS 194


>gi|119626223|gb|EAX05818.1| CCR4-NOT transcription complex, subunit 6-like, isoform CRA_a [Homo
           sapiens]
          Length = 528

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 88/345 (25%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 159 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 218

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 219 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 278

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 279 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 338

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 339 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 398

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 399 GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 458

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 459 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 503


>gi|172058914|ref|YP_001815374.1| endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum
           255-15]
 gi|171991435|gb|ACB62357.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum
           255-15]
          Length = 267

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 73/268 (27%), Gaps = 40/268 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS-----------TERLIN 100
                +       D D++ LQE+        ++       F                 + 
Sbjct: 18  EKLDQIVTQIIQQDYDVIALQEVSQLMDTPVLYNNIREDNFVYLIQQALAKQGFDYSFVW 77

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                  +     +A+  K+  +   SY +  ++D+     +R+ V   ++++G  I   
Sbjct: 78  DFSHIGYDAYEEGLALLTKHPILKSDSYYISRSQDTMDWK-SRKIVRATIDLDGTPITFN 136

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             HL  +   D   +    +        +W               +  GDFN        
Sbjct: 137 SCHLGWWEDADEPFSEQFNNLIARMDPLEW--------------TMFMGDFNNDALERET 182

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275
             D+      +D  +   +         K    +       +D  + ++      +   F
Sbjct: 183 GYDYMMQRGLHDVFLLAQETVGIETVEGKIDGWEENQKGLRLDLVLSNRKIDVDRVGVVF 242

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +             +SDH  + +D  
Sbjct: 243 DGVFAPV---------VSDHFGVEVDIS 261


>gi|67526939|ref|XP_661531.1| hypothetical protein AN3927.2 [Aspergillus nidulans FGSC A4]
 gi|40740046|gb|EAA59236.1| hypothetical protein AN3927.2 [Aspergillus nidulans FGSC A4]
 gi|259481499|tpe|CBF75076.1| TPA: inositol phosphosphingolipid phospholipase C (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 451

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/338 (11%), Positives = 78/338 (23%), Gaps = 78/338 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  + +R+++ N   L       L K   +R +     L     N   DI+ LQE  +  
Sbjct: 2   ADPESIRILTLNCWGL-----KYLAKYRHERLSEIGRQLA--LANPPPDIIGLQECWTQQ 54

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GA 133
                   +   I      ++ + K          +A+  K        +         A
Sbjct: 55  --------DYESIRTQIAHILPYGKFYFGGIWGAGLAIFSKWPIEQTSMHAYPLNGRPTA 106

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    +      +     K  V ++           +  +    +  + QA  +  
Sbjct: 107 FFRGDWFVGKGVACARIRYGQGKHDVAEVFCTHLHAP-YEQEPHDSYLAHRTAQAWEIAK 165

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNND--------DFWKTIDP--------------- 230
            +    E     +  GDFN   +   +          D W+ I P               
Sbjct: 166 LMRGAAERGHLVIGLGDFNMLPSSFAHRLICAHSPVVDAWQVIYPDSSVGAAKDAVEQAR 225

Query: 231 ---------NDSLIRFPKEKDSRCNANK--------------------NLRNKI-PIDYF 260
                    N        +                             +   K   +DY 
Sbjct: 226 GKPVPSAEFNLHHNGATCDGPYNTWRWSKKDQKRLDKGHDIAVEAFKDSPDYKGKRLDYI 285

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +       +   +            +    LSDH  +
Sbjct: 286 FVGGEVGWSVRDVNI----AMTQRHPTLKCSLSDHFAV 319


>gi|258647674|ref|ZP_05735143.1| AP endonuclease domain protein [Prevotella tannerae ATCC 51259]
 gi|260852503|gb|EEX72372.1| AP endonuclease domain protein [Prevotella tannerae ATCC 51259]
          Length = 359

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 75/310 (24%), Gaps = 70/310 (22%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +      ++++S+N   L          ++          +  Y +   ADI  LQE+ S
Sbjct: 93  STPPKTAIKVISYNTLFLGGPCEDPTTGDN---------NVALYLELQKADIACLQEVPS 143

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +         + +   +    + +    D        IA+      V  +         S
Sbjct: 144 F---------DGYYEQHVFPVMKHAKYHDGILFNGVFIAMFSHYPIVRHELICQDEGNGS 194

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL------------- 183
            +           V   G  I V++ HLKS          +                   
Sbjct: 195 VAFW--------TVRAPGDTILVINNHLKSIGLSRQDREEFKEMVHAPESKISRQGSKTI 246

Query: 184 ----------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                      +  A  +  +I +      P ++ GDFN                   D 
Sbjct: 247 LSKITHAAAARAAMADKVAAFIDRH--RGTPMIVCGDFNDTSISYAYRRV------GKDL 298

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +         +       + ID     +    +                       S
Sbjct: 299 TDAYVSTGRGFGRSFNRDAIFVRIDQMFCSEEFTPYAAYVDSRIKC-------------S 345

Query: 294 DHCPISIDYD 303
           DH PI   ++
Sbjct: 346 DHYPIVAYFE 355


>gi|254581384|ref|XP_002496677.1| ZYRO0D05588p [Zygosaccharomyces rouxii]
 gi|238939569|emb|CAR27744.1| ZYRO0D05588p [Zygosaccharomyces rouxii]
          Length = 356

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/353 (11%), Positives = 96/353 (27%), Gaps = 61/353 (17%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           +L  V   +P +     K+ ++++N+     +  Q    +     K       L ++   
Sbjct: 6   LLIPVRSSIPGSNPA--KLSVLTYNMLSPYYMWPQVYTYVPDEYKKWNYRHKLLQKEILG 63

Query: 63  NLDADIVFLQEMGSYNAVAK----VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              ADI+ LQE+ S +        +  K  +   Y  +    + +R  +      +    
Sbjct: 64  LYRADIMCLQELTSLDYQQYWNKVLMEKYNYGSKYIAKPPPKYWERSLSEMDGVGVFYDL 123

Query: 119 KNVRVLQQSYPLLGAKDSFSR--------------------------------AGNRRAV 146
                +  +   L                                          N+  +
Sbjct: 124 NKFDYISSTGIYLNDLFGTFDLKEQNYLEHKMLQLTDGQGNPMEKMTLSDVLKGRNQVCM 183

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTY-SPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + +       +++ I+   +   D ++          LS+  + L   +     + V  
Sbjct: 184 FVSLRHKATNTFLIVINTHLYWKYDEVKLAQCMIIMRRLSKIIKDLLIGVQDTTYNKVKI 243

Query: 206 VIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + AGD N   + L                  +     ++               C +   
Sbjct: 244 IFAGDMNSSRDSLVVKFLKGDPVSHENLKLINPMRPYLNRVLYDNIPEDLFVHTCFSG-- 301

Query: 251 LRNKIPIDYF-VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + K   DY      +     +     ++  + +         SDH PI +++
Sbjct: 302 -KLKGIFDYICYHSDDLAPRKVLGVSDDLKIDPEMGLPNASHPSDHIPIMMEF 353


>gi|326779823|ref|ZP_08239088.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326660156|gb|EGE45002.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 260

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 73/298 (24%), Gaps = 57/298 (19%)

Query: 9   LVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +V   +P + +       +R++S+N+ +L                  D   L +      
Sbjct: 1   MVLTPLPVSRTEPDGSAVIRVLSYNVRSL----------------RDDTAALARVIHACA 44

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVL 124
            D++ +QE               W    +     +     S        + +    V V 
Sbjct: 45  PDLILVQEAP---------RFFRWRKAAARLAKASGLVVLSGGATAAGPLLLCSLRVTVE 95

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +    LL       R   R     +V I G ++ VL  HL             S      
Sbjct: 96  RTEDVLLPLTPGLHR---RGFATAVVRIAGARLGVLSCHL-------------SLQRDER 139

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             QA  L + +          V  GD N                D              +
Sbjct: 140 LAQAGLLLERLASMGVEHA--VAGGDLNDVPTGKAFRHLAGPLQDCRAVAPWGGDLTFPQ 197

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    +  ID                       EDD+    +  +DH P+    
Sbjct: 198 ------DGPRKRIDAVFATPGIEVLGCGVPSGLDGVGEDDL----RAATDHLPVLAAL 245


>gi|167561163|ref|ZP_02354079.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           oklahomensis EO147]
 gi|167568380|ref|ZP_02361254.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           oklahomensis C6786]
          Length = 268

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 77/308 (25%), Gaps = 66/308 (21%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
             +        ++  VSWN++      G + W             +R + ++  AD+ FL
Sbjct: 7   LPLAEPQPAENEITAVSWNLHKGRSPLGFTAWD-----------AMRSWVESTHADVYFL 55

Query: 72  QEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           QE  +                   V  V+      I  + +  I               A
Sbjct: 56  QEAMARRMPRPMLASGFGRPMAEPVDDVWHCQATEIARALDWQIALGPNVFKPSWRHGNA 115

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174
           +   +   L   + +        R   R  +        G  + +L  HL          
Sbjct: 116 ILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGGAPVTLLCAHLALT------- 163

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                  +   +Q  W+  WI +   +  P V+AGDFN   N           +     L
Sbjct: 164 ------RAARLRQMSWIAHWIERHASTG-PLVLAGDFNDWRNDSIP-------LFGEIGL 209

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                   +           + +D   +                             LSD
Sbjct: 210 SEVATLLGASGRTFPAFSPALALDKMFVRGMTPIEWRAPG------------DETAWLSD 257

Query: 295 HCPISIDY 302
           H P     
Sbjct: 258 HLPYVARL 265


>gi|155372049|ref|NP_001094631.1| CCR4-NOT transcription complex subunit 6 [Bos taurus]
 gi|151556290|gb|AAI50117.1| CNOT6 protein [Bos taurus]
 gi|296486237|gb|DAA28350.1| CCR4-NOT transcription complex, subunit 6 [Bos taurus]
          Length = 557

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEISSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRSLQSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 489 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 539


>gi|291523682|emb|CBK81975.1| Endonuclease/Exonuclease/phosphatase family [Coprococcus catus
           GD/7]
          Length = 365

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 101/325 (31%), Gaps = 63/325 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +  ++   +++NI               G S W  S              A +L+ D   
Sbjct: 60  TTGEQYSALTYNIGFGAYTPDFSFFMDGGKSSWAKSKDSVLDTVQGAGDLAASLNPDFAM 119

Query: 71  LQEMG----------SYNAVAKVFPKNTWCI---FYSTERLINHSKRDSNNDIHTAIAVR 117
           ++E+            Y+ +   FP + +     + S       ++   ++     +  +
Sbjct: 120 IEEIDLDSTRSYHVNEYDILRNCFPNDYYVFAQNYDSAFLFYPFTQPHGSSKSGIGLFSK 179

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                 L++S P+  +   F       ++  +   NGK++ +  +H+ ++   D+     
Sbjct: 180 YPVTSALRRSLPISTSFSKFLDLDRCYSISRVPVDNGKELVIFALHMSAYGNSDA----- 234

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-----NYLGNNDDFW------- 225
                +   Q   L   + ++ E     +  GDFN  +     +   +    +       
Sbjct: 235 -----IREGQIAMLSADMQKEYEVGNYVLCGGDFNHDLKASDGDEEEHESWAYPFPREAL 289

Query: 226 --------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                     +   +    +   +++      ++   + +D F++  N            
Sbjct: 290 PEHFSFCIDALSEEERNAMWNSARNADMAYVPDVTYTVTLDGFIVSDNIECL-------- 341

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
                 +    G   SDH P+ +++
Sbjct: 342 ----TYENVDTGYSYSDHDPVYMEF 362


>gi|118345658|ref|XP_976659.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89288076|gb|EAR86064.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 480

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 62/200 (31%), Gaps = 19/200 (9%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79
            VR++++NI         +      +RT      +  +      DIV LQE+    +   
Sbjct: 76  SVRVLTYNIFLRPPPIKNNKDDYKNERTKLFLNSISDF------DIVCLQELFGFLNQRK 129

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +F       FY               D    +    +   + +   P          
Sbjct: 130 HKIIFNAMKQGFFYHATSPSPSFFSSYLVDG--GLVTISRFPIIEKSYRPFKYGV-LSDN 186

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198
              +  +   ++ N   I + + HL++        N    +      Q   +KD+I ++ 
Sbjct: 187 LSQKGVLYTKIQANDSYIHLFNTHLQASYVGAE--NNVKATVITRVDQLILIKDFIKEQV 244

Query: 199 ----KESLVPFVIAGDFNRK 214
               ++     +I GDFN  
Sbjct: 245 KKHREKESDIIMICGDFNVN 264


>gi|149052414|gb|EDM04231.1| similar to CCR4, isoform CRA_b [Rattus norvegicus]
          Length = 521

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 153 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 212

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 213 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 272

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 273 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 332

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 333 SDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTG 392

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 393 GVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 452

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 453 IIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 503


>gi|222109447|ref|YP_002551711.1| exodeoxyribonuclease iii xth [Acidovorax ebreus TPSY]
 gi|221728891|gb|ACM31711.1| exodeoxyribonuclease III Xth [Acidovorax ebreus TPSY]
          Length = 267

 Score = 65.7 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/277 (9%), Positives = 72/277 (25%), Gaps = 62/277 (22%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +  +      D + +QE+ + +A             +     +      +    ++ + +
Sbjct: 20  VEAWIAQSRPDCICVQEIKAQSA--------DMQGRFEELAGLKGYFHFAVKKGYSGVGI 71

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             ++              D+  R      VEL  +   +++ ++  +  S    +  +  
Sbjct: 72  YARHEPSDVVIGYGSSEFDTEGRY-----VELRFDTPARRLSIISAYFPSGSSGEERQLA 126

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                         L        ++   F++ GD N                        
Sbjct: 127 KFRFLEEFHPHLMRL--------KAEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPEE 178

Query: 221 NDDFWKTID----PNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNA 266
                K +         +  + + +    +A      N+           +DY +     
Sbjct: 179 RAWMTKLLHISDPTGGLVDVYRQLQPEATDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 E              + ++ SDH PI++ Y+
Sbjct: 239 AALARTEEI-----------YKAQKFSDHAPITVGYE 264


>gi|332291583|ref|YP_004430192.1| exodeoxyribonuclease III Xth [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169669|gb|AEE18924.1| exodeoxyribonuclease III Xth [Krokinobacter diaphorus 4H-3-7-5]
          Length = 254

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 78/304 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           ++++S+N+N +                         + ++ D D+V LQE  +       
Sbjct: 1   MKIISYNVNGIRAALRKDF---------------ATWLQHTDPDVVLLQETKATPDQVDT 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            VF    +  ++ + +   +          + +A+  K          + G         
Sbjct: 46  AVFESLGYEHYWFSAQKKGY----------SGVAILTKKTPKNV----VYGTGIESMDFE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      + ++   + V+ ++L S                   +    L+D++ + K+ 
Sbjct: 92  GRN-----IRVDFDDVSVMSMYLPSGT--------NIARLEHKLEYMSLLQDYVNKIKQD 138

Query: 202 LVPFVIAGDFNRKINYLGNNDDF--------------WKTIDPNDSLIRFPKEKDSRCNA 247
           +   VI GD+N     +  +D                W +   +   I   +  +   + 
Sbjct: 139 VPNLVIGGDYNICHEAIDIHDPVRNKNVSGFLPVEREWISNFMDSGFIDSFRHLNKEPDN 198

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           IDY ++ +     + +        +           SDHCP 
Sbjct: 199 YTWWSYRANARANNKGWRIDYNMVSEPLKNNIERAVILSDAVH-----------SDHCPH 247

Query: 299 SIDY 302
            ++ 
Sbjct: 248 MVEL 251


>gi|312214267|emb|CBX94260.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1190

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 80/350 (22%), Gaps = 83/350 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGS 76
           S    +R+++ N   L         K   K      T +           DIV LQE  +
Sbjct: 7   SPPSSLRILTLNCWGL---------KFISKLRHERLTEIGVQIAAAKPTPDIVGLQECWT 57

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAK 134
                 +  K    + Y                    +A+  K          YPL G  
Sbjct: 58  QEDYNAIREKTHHILPYGKFYWSGIFGG--------GLAILSKWPIEESNMVRYPLNGRP 109

Query: 135 DSFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +F R      +      + +   +  V ++              +       + QA  +
Sbjct: 110 AAFYRGDWFVGKGVACARIRMGPSRRDVAEVFCTHLHAPYER-EPHDSYICHRTAQAWEI 168

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPN----DSLIRFPK 239
              +    E     +  GDFN     L +          D W+ + P+     +     +
Sbjct: 169 TKLMRAAAERGHLVIGLGDFNMVPLSLAHRIIETHSPVKDVWRILHPDSSIGAAKDAVEQ 228

Query: 240 EKDSRCNANKN-------------LRNKI--------------------------PIDYF 260
            ++      +                 +                            +DY 
Sbjct: 229 ARERPMPTAEYNMTINGATCDSALNSWRWNQAHKRRLARGENVQIEPTVPDPDAKRLDYI 288

Query: 261 VM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL------SDHCPISIDYD 303
                           ++    E ++    +        SDH  +     
Sbjct: 289 FFSSPRYRDGGTGNEAADWELKEANVGMEMRHPTLHCSLSDHFSVEATLT 338


>gi|229489432|ref|ZP_04383295.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121]
 gi|229323529|gb|EEN89287.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121]
          Length = 281

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 77/279 (27%), Gaps = 55/279 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           +    +  + +   AD + LQE           + P      F  +           +  
Sbjct: 29  AARKGMLDWLEKTSADFICLQETRASDDQLRETLEPALGKGWFLVSAE--------PSAK 80

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +AV  +      +    +G  D       R      +E +   + V  ++L S   
Sbjct: 81  GRNGVAVLSRTEPDAVR----IGHGDDEFLDAGRY-----IEADFADLTVASLYLPSG-- 129

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------ 223
            ++L          ++  A  L       + +    V++GD+N     L   +       
Sbjct: 130 -EALTPKQEEKERFMASFAVHLASTAAAAEAADRHVVVSGDWNIAHTELDLKNWKTNKKS 188

Query: 224 --------FWKTI---DPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMD 263
                    W  +   + +  +  F                +           IDY V  
Sbjct: 189 SGFLPEERAWMDLLFAEDSAWVDVFRTLHPGVDGPYSWWSYRGKAFDNDSGWRIDYQVAT 248

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   +          +   +  ++   R SDH P+++ Y
Sbjct: 249 RGYAERAK-------VALVERAEAYDLRWSDHAPVTVSY 280


>gi|325109514|ref|YP_004270582.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
 gi|324969782|gb|ADY60560.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
          Length = 329

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 94/329 (28%), Gaps = 74/329 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADIV 69
             ++  A+ +++++WN+             N   RTT++  ++ +  K L       D++
Sbjct: 13  AVSSVHAEDIKVLTWNVE-----------SNRDNRTTNNPAVIARKLKLLQSTSGPYDLI 61

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL---QQ 126
            L E+ + +A            F +           S N     I VR     +     +
Sbjct: 62  GLTEVAASSA------GTYTDAFAADGLEYRAFLSASGNTDRMLILVRDDRFTIEGNRAE 115

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                G    F     R+   + V  +          +      +S         +   Q
Sbjct: 116 ELQNDGGSILFPGGSARQPFVVTVTDSKNDDLTFRFMVNHLNRGNS---------NSRQQ 166

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNR-------------------KINYLGNNDDFWKT 227
           QA+ L++W  ++    +P V  GD+N                         G     W  
Sbjct: 167 QAKGLREWARRQ---TLPVVAVGDYNFDFDFRNLTGNPSMSMFMRLDPAERGLFVWNWII 223

Query: 228 IDPNDSLIRFPKEKD----SRCNANKNLRNKIP----------IDYFVMDQNAYKFLIQE 273
            +   ++                 + N  +             +D+  +   A  +  + 
Sbjct: 224 PNATFTVDGATDVTRKIKLDVTFTDSNWYDPQRDGFDDFRDSLLDFIFVAGPARNWAARS 283

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  ++  +           SDH P+   +
Sbjct: 284 NVIQLPGD----FPDNDHTSDHRPVDATF 308


>gi|241958790|ref|XP_002422114.1| inositol phosphosphingolipids phospholipase C, putative;
           phospholipase C, putative [Candida dubliniensis CD36]
 gi|223645459|emb|CAX40116.1| inositol phosphosphingolipids phospholipase C, putative [Candida
           dubliniensis CD36]
          Length = 438

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/323 (13%), Positives = 90/323 (27%), Gaps = 59/323 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-----LDADIVF 70
            +    Q ++L+++N   L         K   K        +     N      D DIV 
Sbjct: 12  VSEPKKQFIKLLTFNTWGL---------KFISKHRKERLRAIADALANPKSPDEDYDIVA 62

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+        +                   K    +    A+  +          +P+
Sbjct: 63  LQEIWCEEDWQYLDLVCRPRY-----PYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPI 117

Query: 131 LGAKDSFSRAGNRRAVELLVE------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            G   +F R        + V        +   I +L+ H+ +         +   +C   
Sbjct: 118 NGRPSAFFRGDFYVGKSIAVTMFQPHHPDILPIALLNSHMHAPYGSGDASYSTHRAC--- 174

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIR 236
             QA      +   K++    +  GD N K + L            D W  ++ ++ +  
Sbjct: 175 --QAWDFAKLVRMLKKAGYAVIQVGDLNSKPDSLPYKLFTVEGGLTDSWNVLNADNVVPN 232

Query: 237 FPKEKDS------------RCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEIL 279
                 S                N    ++       +DY ++D +    +      ++ 
Sbjct: 233 DQIATLSLEDQISLAGVTCNSRLNTWRESRPLWEACRLDYALIDASNITPVAA----QVK 288

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
           + +          SDH   S+D 
Sbjct: 289 FVDKLPPPLSCSYSDHFAYSVDL 311


>gi|188589668|ref|YP_001919752.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188499949|gb|ACD53085.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 262

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 77/268 (28%), Gaps = 40/268 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCI--------FYSTERLIN 100
                L +     D D + LQE+    + N +      + + +        + +      
Sbjct: 18  DKIKYLAKTIAEKDYDAIALQEVSQSINSNVIKSNLKYDNFAVLLKSELDKYNTNYNFFW 77

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                        +A+  K+  V ++S+ +  A D       RR V+L  E N + I + 
Sbjct: 78  DFSHIGYEKYEEGLAIFTKHNIVDEKSFFISKATDVEYWK-TRRIVKLTFEYNNENIDIY 136

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             HL            +         Q + L +    +  S       GDFN        
Sbjct: 137 SCHLGW----------WEDQEEPFKYQVKKLLE----ENTSNNTTFFMGDFNNNAFIRNE 182

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESF 275
             D+       D+     +  +      K            +D  + ++       +  F
Sbjct: 183 GYDYLLNKGLIDTFTISKEADNGITVRGKIDGWDENKEKLRLDLILSNKKLDVLTSKVIF 242

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + I  +          +SDH  + +  +
Sbjct: 243 NGINKDI---------ISDHYGVEVSLN 261


>gi|85089978|ref|XP_958199.1| hypothetical protein NCU09759 [Neurospora crassa OR74A]
 gi|28919535|gb|EAA28963.1| hypothetical protein NCU09759 [Neurospora crassa OR74A]
          Length = 459

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/299 (9%), Positives = 76/299 (25%), Gaps = 30/299 (10%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +    +++ N+  L E   V           +    +         D+V +QE  +Y+A 
Sbjct: 20  SGDFTILTMNVAGLPE---VLNPNGVPGGKEASSKTIGSRFAQYGFDVVHVQEDFNYHAA 76

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                 + +    S           S  +  +       + +  + +     ++      
Sbjct: 77  LYSTDTHPYRTPTSGGVPFG-----SGLNTLSNFPWLSGSFQRQKWAKSSCASEFDCLTP 131

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                + + +  +     V+ +   +       E     +    +   + + +WI     
Sbjct: 132 KGFTFMRVALSSSSDATDVVYVDFYNMHTDAGTETADLEA---RNDNLRQVGEWIQTH-S 187

Query: 201 SLVPFVIAGDFNRKINYL-------------GNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                ++ GD N + +                      + I                C  
Sbjct: 188 QGNAVLVFGDTNSRYSRSGDTGIRSLLKSENPTGAAGLQDIWVGLHRNGVVPNDAGVCGN 247

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--KRLSDHCPISIDYDF 304
                    +D  +   +    L   +     Y      +      LSDH P+ ++  +
Sbjct: 248 PAEDAACEIVDKVLYRSSPLVQLTPTALE---YAGPRFLADDGVSVLSDHNPVLVNLTW 303


>gi|70991755|ref|XP_750726.1| sphingomyelinase family protein [Aspergillus fumigatus Af293]
 gi|66848359|gb|EAL88688.1| sphingomyelinase family protein, putative [Aspergillus fumigatus
           Af293]
 gi|159124288|gb|EDP49406.1| sphingomyelinase family protein, putative [Aspergillus fumigatus
           A1163]
          Length = 481

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 73/343 (21%), Gaps = 80/343 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYNAV 80
           ++R+++ N   L         K   K      + + +     D    IV LQE  +    
Sbjct: 17  EIRILTLNCWGL---------KYLAKYRHERLSEIGRQLALADPPPQIVGLQECWTQQDY 67

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKD 135
             +  +    + Y                    +A+  K        Y         A  
Sbjct: 68  ESIRQQTNHILPYGKFYFGGIFGA--------GLAILSKWPIEESTMYAYPLNGRPTAFF 119

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  +      +    +   V ++           E   S  C   + QA  +   +
Sbjct: 120 RGDWFVGKGVACARIRFGPEVGDVAEVFCTHLHAPYEREPNDSYIC-HRTAQAWEIAKLM 178

Query: 196 TQKKESLVPFVIAGDFNRKINY--------LGNNDDFWKTIDPNDSL------------- 234
               E     +  GDFN   +              D W+ + P+ S+             
Sbjct: 179 RGAAERGHLVIGLGDFNMIPSSFAHQLIHAHAPVRDVWQVLHPDSSVGATIDLPEQKRNR 238

Query: 235 -----------IRFPKEKDSRCNANKNLRNKI-------------------PIDYFVMDQ 264
                           +             K                     +DY  +  
Sbjct: 239 PVPTAEFNLLENGATCDGRFNTWRWSKEDRKRLEKGEDVVVDKDSPCPRGKRLDYIFVGD 298

Query: 265 NAYKFLIQESFS----EILYNEDDIKSRGKRLSDHCPISIDYD 303
             Y               +       +    LSDH  +     
Sbjct: 299 GGYPPAYPAPRWSVQSVGVGMTQRHPTLRCSLSDHFAVEAVIS 341


>gi|242095430|ref|XP_002438205.1| hypothetical protein SORBIDRAFT_10g009570 [Sorghum bicolor]
 gi|241916428|gb|EER89572.1| hypothetical protein SORBIDRAFT_10g009570 [Sorghum bicolor]
          Length = 468

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/347 (11%), Positives = 91/347 (26%), Gaps = 71/347 (20%)

Query: 15  PCTASVAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
             T+       ++S+NI    N  +  +          R  S   L+ +  ++ D D+V 
Sbjct: 96  ASTSPSGDACTIMSYNILADYNAQNHPDLYLDVPWDALRWDSRRRLIIREIRHWDPDLVC 155

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+  +  +A       +           + +R  +     A+  + K + +L++    
Sbjct: 156 LQEVDRFQDIATGMKSRGYEGI--------YQRRTGDTRDGCAMFWKSKRLHLLEEDSID 207

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      N  A   + E+NG       +      F     +       +L ++A  
Sbjct: 208 FSE----FNLRNNVAQICVFELNGT--HKFVLGNIHVLFNPKRGDIKLGQIRMLLEKANA 261

Query: 191 LK------------DWITQKKESLVPFVIAGDFNRKINYLGN------------------ 220
           L             D+ +    ++  F+     N  ++                      
Sbjct: 262 LAEKWDKIPIVLAGDFNSTPDSAIYKFLSTMKLNISLHDRRQLSGLDSSDFGLYELCSLL 321

Query: 221 -NDDFWKTIDPNDS----------------------LIRFPKEKDSRCNANKNLRNKIPI 257
                 + +                                         + + +    +
Sbjct: 322 KYQWTDEEVRNATGCSNVVVAEHPLKLSSSYAMLKGNSDNRGLHGEPSATSYHKKFLGTV 381

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           DY    +      + ++    +          +  SDH PI  ++ F
Sbjct: 382 DYLWHTRGIECSRVLDTLPIGVLRRTRGLPTREIGSDHLPIVAEFSF 428


>gi|38154560|gb|AAR12207.1| cytolethal distending toxin B [Escherichia coli]
          Length = 269

 Score = 65.7 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 100/304 (32%), Gaps = 43/304 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++KY+++L+ FL     +     R+ +WN+   S         N           +RQ  
Sbjct: 1   MKKYIISLIVFLSFYAQADLTDFRVATWNLQGASATTESKWNIN-----------VRQLI 49

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              +A DI+ +QE                    +   + +          + +   R + 
Sbjct: 50  SGENAVDILAVQE----------AGSPPSTAVDTGRVIPSPGIPVRELIWNLSTNSRPQQ 99

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVEL----LVEINGKKIWVLDIHLKSFCFLDSLENT 176
           V +   +    G + + +   NR+A E+     V   G+ +  + I   +F    ++   
Sbjct: 100 VYIYFSAVDAFGGRVNLALVSNRQADEVFVLRPVRQGGRPLLGIRIGNDAFFTAHAIATR 159

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + + +L+ +   + +D         + ++I GDFNR+ + L  N             + 
Sbjct: 160 NNDAPALVEEVYSFFRDS-RDPVHQAINWMILGDFNREPDDLEVN-----------LTVP 207

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                +          ++  +DY V                +         R +  SDH 
Sbjct: 208 VRNASEIIFPTAPTQTSQRTLDYAVAGNAVAFRPFP-----LQAGIVYGARRTQMSSDHY 262

Query: 297 PISI 300
           P+ +
Sbjct: 263 PVGV 266


>gi|294899286|ref|XP_002776572.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
 gi|239883614|gb|EER08388.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
          Length = 2563

 Score = 65.3 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 84/315 (26%), Gaps = 66/315 (20%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL------QEMGSYNAV 80
           +SWNIN L              ++ ++ + L +  +N    I+ L      QE       
Sbjct: 560 LSWNINGLRGF----------LKSEANVSCLNRLVRNELPAIMVLTETKLTQEKKDRAFT 609

Query: 81  AKVFPKNTWCIFYSTERLINHSK--------RDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             +         +S E               R  +      + +  + +  +   +    
Sbjct: 610 KLLDSLPVRYDVFSAESAGRKGYAGVAVLLKRAVDVGYDDGLCLIHEPITGIPSRFFDGE 669

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             +       R     ++ I  ++  ++ +++ +           S       +  +WL+
Sbjct: 670 QDEEEDTTSGR-----VLTIELRQCTLVAVYVPNSGGDLRFLEYRSKWDVAFRRYMKWLR 724

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------------FWKTIDPND 232
                      P +IAGD N   + L   D                       + +   D
Sbjct: 725 SR-----AGEKPLIIAGDLNACGSDLDIGDTRREAPHSPSIQPCEVEAFERLQREVSLCD 779

Query: 233 SLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +      E     +   N           IDY ++       ++  +     +       
Sbjct: 780 TFRIVHPEVAGVYSFYCNAYEKKLNFGRRIDYILVSSEQSDCVVDSTVFYAEFGLGYRP- 838

Query: 288 RGKRLSDHCPISIDY 302
                 DHCPI  + 
Sbjct: 839 ------DHCPILAEL 847


>gi|226501848|ref|NP_001146148.1| hypothetical protein LOC100279717 [Zea mays]
 gi|219885971|gb|ACL53360.1| unknown [Zea mays]
          Length = 572

 Score = 65.3 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 84/314 (26%), Gaps = 64/314 (20%)

Query: 16  CTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
              S      ++S+NI  +T +  +  S         T     L +      ADI+ LQE
Sbjct: 244 SQTSSLGTFTVLSYNILADTYATSDAYSYCPTWALTWTYRRQNLLREIIGYHADIICLQE 303

Query: 74  MGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +      +  +    ++ +   Y       +S      D       R K   V +     
Sbjct: 304 VQVNHFEDFFSPELDRHGYQALYKKRTTEVYSGNPMAIDGCATFFRRDKFSHVKKYEVEF 363

Query: 131 LGAKDSFSR-----AGNRRAVELLVEINGKKIWVLDIHLKS-----------FCFLDSLE 174
             A  S +      A  R A+  L++ N   I VL+    +            C  ++  
Sbjct: 364 NKAAQSLTDAIIPSAQKRLALNRLIKDNIALIAVLEAKFANHGAENPGKRQLLCVANTHI 423

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGN------------- 220
           N +     +   +   L   + +    + +P ++ GDFN       +             
Sbjct: 424 NVHQDLKDVKLWEVHTLLKGLEKIAVSADIPMLVCGDFNSPPGSSPHALLAMGKVDQHHP 483

Query: 221 -------------------------NDDFWKTIDPNDSLIRFPKEKDSRCN----ANKNL 251
                                       F + +     L    +  D   N     N   
Sbjct: 484 DLAIDPLGILRPPSKLNHQLPLVSAYSAFARMVGVGYDLEHQRRRTDPATNEPLFTNCTR 543

Query: 252 RNKIPIDYFVMDQN 265
                +DY     +
Sbjct: 544 DFTGTVDYIFYTAD 557


>gi|194383744|dbj|BAG59230.1| unnamed protein product [Homo sapiens]
          Length = 231

 Score = 65.3 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 74/256 (28%), Gaps = 37/256 (14%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             L  Y      D++FLQE+              +  +                   TAI
Sbjct: 3   RALNSYLALYSPDVIFLQEV-----------IPPYYSYLKKRSSNYEIITGHEEGYFTAI 51

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            ++K  V++  Q      +         R  + + V ++G ++ ++  HL+S        
Sbjct: 52  MLKKSRVKLKSQEIIPFPST-----KMMRNLLCVHVNVSGNELCLMTSHLEST------- 99

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                  +    Q + +   + +        + AGD N +   +         I      
Sbjct: 100 ---RGHAAERMNQLKMVLKKMQE-APESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEF 155

Query: 235 IR------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-FLIQESFSEILYNEDDIKS 287
           +       +  +     N       K+  D       A +  +I  S   +     +   
Sbjct: 156 LGKPKHCQYTWDTQMNSNLGITAACKLRFDRIFFRAAAEEGHIIPRSLDLLGL---EKLD 212

Query: 288 RGKRLSDHCPISIDYD 303
            G+  SDH  +  + D
Sbjct: 213 CGRFPSDHWGLLCNLD 228


>gi|182439171|ref|YP_001826890.1| hypothetical protein SGR_5378 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467687|dbj|BAG22207.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 263

 Score = 65.3 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 73/298 (24%), Gaps = 57/298 (19%)

Query: 9   LVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +V   +P + +       +R++S+N+ +L                  D   L +      
Sbjct: 4   MVLTPLPVSRTEPDGSAVIRVLSYNVRSL----------------RDDTAALARVIHACA 47

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVL 124
            D+V +QE               W    +     +     S        + +    V V 
Sbjct: 48  PDLVLVQEAP---------RFFRWRKAAARLAKASGLVVLSGGATAAGPLLLCSLRVTVE 98

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +    LL       R   R     +V I G ++ VL  HL             S      
Sbjct: 99  RTEDVLLPLTPGLHR---RGFATAVVRIAGARLGVLSCHL-------------SLQRDER 142

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             QA  L + +          V  GD N                D              +
Sbjct: 143 LAQAGLLLERLASMGVEHA--VAGGDLNDVPTGKAFRHLAGPLQDCRAVAPWGGDLTFPQ 200

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    +  ID                       EDD+    +  +DH P+    
Sbjct: 201 ------DGPRKRIDAVFATPGIEVLGCGVPSGLDGVGEDDL----RAATDHLPVLAAL 248


>gi|149020402|ref|ZP_01835294.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|303260024|ref|ZP_07345998.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303261430|ref|ZP_07347378.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264097|ref|ZP_07350018.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS397]
 gi|303269531|ref|ZP_07355295.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS458]
 gi|147930704|gb|EDK81686.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|302637564|gb|EFL68051.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638943|gb|EFL69404.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302640916|gb|EFL71299.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS458]
 gi|302646502|gb|EFL76728.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS397]
 gi|332202623|gb|EGJ16692.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA41317]
          Length = 271

 Score = 65.3 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAVLNW 270


>gi|209549109|ref|YP_002281026.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534865|gb|ACI54800.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 267

 Score = 65.3 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 74/308 (24%), Gaps = 71/308 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +R++S N                          L  Y +  +AD++ LQE+         
Sbjct: 1   MRIISLNAWGGRLH-----------------EALIDYVRQAEADVLCLQEVLRAPGADWG 43

Query: 75  -------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RK 118
                         +               F+           DS       +A    + 
Sbjct: 44  WSIYRDAGLELPQRANLFAEISAALPGHDGFFCPTSRGELFNGDSAIAAEFGLATFVRKS 103

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRR----AVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +V      +   G   +      R      + ++   N   + +  +H          +
Sbjct: 104 HSVIAQGLDFVHGGFSANGWGEHPRPRNAHCIRVVSRENASSLTIAHMH-------GLRD 156

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                  +   +QA  L   + +        V+ GDFN   +      + +  +      
Sbjct: 157 PAGKSDTAARKKQAAALVALVERVWPGGEGLVVCGDFNVLPDS-----ETFAILARLGLS 211

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                        +  L+     DY ++                 +   +       +SD
Sbjct: 212 ELVTGNGLVDTRTSYYLKQGRFADYMLVTPE---------VKIARFEVVEAPE----VSD 258

Query: 295 HCPISIDY 302
           H  + +D 
Sbjct: 259 HRALLLDI 266


>gi|169625216|ref|XP_001806012.1| hypothetical protein SNOG_15875 [Phaeosphaeria nodorum SN15]
 gi|111055593|gb|EAT76713.1| hypothetical protein SNOG_15875 [Phaeosphaeria nodorum SN15]
          Length = 464

 Score = 65.3 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/347 (12%), Positives = 76/347 (21%), Gaps = 75/347 (21%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQE 73
            +      +R++S N   L         K          T +       D   DIV LQE
Sbjct: 2   VSEQPPSSIRILSLNCWGL---------KYIATLRNERLTEIANQIAAADPRPDIVGLQE 52

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             +          N      ++                 AI  +          YPL G 
Sbjct: 53  CWTQQ------DYNVIREKTNSFLPYGKFYHSGIFGGGLAILSKWPLEESNMVRYPLNGR 106

Query: 134 KDSFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             +F R      +      + I   +  + ++              +       + QA  
Sbjct: 107 PAAFYRGDWFVGKGVACARIRIGPGRRDIAEVFCTHLHAP-YETEPHDSYICHRTAQAWE 165

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDP------------ 230
           +   +    E     +  GDFN     L +          D W+ + P            
Sbjct: 166 ITKLMRGAAERGHLVIGLGDFNMVPLSLAHRIIETHSPVRDVWRILHPDSSLGAAKDKVE 225

Query: 231 ------------NDSLIRFPKEKDSRCN-------------------ANKNLRNKIPIDY 259
                       N ++     + +                             N   +DY
Sbjct: 226 KARGNPIPTANFNLTVNGATCDSELNTWRWNKAHKKRLAKGENVQIDPTVADPNAKRLDY 285

Query: 260 FVMDQNAYKFLIQESFSEILYN---EDDIKSRGKRLSDHCPISIDYD 303
                  Y       +     N        +    LSDH  +     
Sbjct: 286 IFFSSARYHGADTPEWQLSAANVGMTMRHPTLHCSLSDHFSVEATLT 332


>gi|258653090|ref|YP_003202246.1| endonuclease/exonuclease/phosphatase [Nakamurella multipartita DSM
           44233]
 gi|258556315|gb|ACV79257.1| Endonuclease/exonuclease/phosphatase [Nakamurella multipartita DSM
           44233]
          Length = 312

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/289 (10%), Positives = 76/289 (26%), Gaps = 63/289 (21%)

Query: 9   LVFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           L+   VP + S +  +  +++ N                     +D   L         D
Sbjct: 62  LIVTAVPGSQSASAPIVTVMTANTEH----------------GQADPNALVATVTTRGVD 105

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ LQE         +   +   +  +    +   +  +     T + +  +        
Sbjct: 106 VLALQE---------LTAGSIDALSSAGLDRVLPYRSIAVQPGGTDVGLWSRYPLTDTH- 155

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                             V+  + + G ++ V+  H ++             S       
Sbjct: 156 ---------MPTGFTVNPVQARITVGGHQVSVIAFHSQAPV-----------SERTTQAW 195

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L+      + +    ++AGDFN   ++L   D        + S       +    + 
Sbjct: 196 QSDLRRLADIMRTAGASTIVAGDFNATRDHLQFRDLLAAGYTDSGSDAGAGLLRTYPTD- 254

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            +     + ID+ ++  +     +                     SDH 
Sbjct: 255 -RFWGPLVGIDHVLVGADLVGVAVGTVAQP--------------GSDHR 288


>gi|198413380|ref|XP_002125127.1| PREDICTED: similar to Deoxyribonuclease gamma precursor (DNase
           gamma) (Deoxyribonuclease I-like 3) (DNase I homolog
           protein DHP2) (Liver and spleen DNase) (LS-DNase) (LSD),
           partial [Ciona intestinalis]
          Length = 480

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 84/308 (27%), Gaps = 45/308 (14%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M    +L L F  V        ++ + ++NI              S         ++ + 
Sbjct: 1   MRLILLLTLCFMKVESL----DQLLISAFNIKVFG---------QSKISKPEVVDVIIKV 47

Query: 61  AKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                 D+V +QE+      +   +  +        T        R S+ + +     R 
Sbjct: 48  LSRY--DLVIVQEIRDIQETSFPTLVEQLNEGGINYTWFTGPRVGRTSSKEQY-GFVYRP 104

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLEN 175
             + +L +        +       R  +          G++  ++ +H K    +  +  
Sbjct: 105 DKLELLGKFQY-----NDTDDVFEREPIITRFRWLGGGGREFTLIPMHAKPTDAVAEMNG 159

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                          L+ ++          +I GD N   +Y+  +      +  + +  
Sbjct: 160 --------------LLQVYMDAVGVYGNNTIILGDLNADCSYVCQSCWDSVVLRTDPTFH 205

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
               +      +N +       D  ++   +                 +  + +   +SD
Sbjct: 206 WLIGDDVDTTVSNTDCAY----DRIIVAGSDLIDLACDGDTYRFDVALNLTQDQALDVSD 261

Query: 295 HCPISIDY 302
           H P+    
Sbjct: 262 HYPVEFRL 269


>gi|62085792|gb|AAX63287.1| DNA lyase [Cordyceps brongniartii]
          Length = 579

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 72/303 (23%), Gaps = 69/303 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV +QE  +   +    +     W +++S  +    +S         T   
Sbjct: 4   AMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATCAP 63

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR-----------AGNRRAVELLVEINGKKIWVLDIHL 164
           +R +   +     P                     +  R  V+  +  +  +  VL+   
Sbjct: 64  IRAEEGVLGVLCPPKSNMPYRDLPVDKQIGGYPTLSQLRGNVDEALLDSEGRCVVLEFPS 123

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
                + S  N             + L   I     +    V+AGD N            
Sbjct: 124 FVLFGVYSPANRDETRIEFRQSFVEALDVRIRNLIAAGKQVVLAGDLNIIRSEMDSSNIA 183

Query: 213 ----------RKINYLGNNDDFWKTIDPNDSL------------------IRFPKEKDSR 244
                      +   +       + +     +                      +     
Sbjct: 184 ESLRKEGISMNEWQSMPTRRILNQLLFEATVIGDRDDDRECAVLWDICRCFHPTRLGMHT 243

Query: 245 CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C   K          PIDY +       + +  +              G   SDHCP+  
Sbjct: 244 CWDTKRNTRPANVGSPIDYILCSDGLKSWFVDSNIQ-----------EGLMGSDHCPVYA 292

Query: 301 DYD 303
              
Sbjct: 293 TMS 295


>gi|169834285|ref|YP_001694221.1| metal-dependent hydrolase [Streptococcus pneumoniae Hungary19A-6]
 gi|168996787|gb|ACA37399.1| metal-dependent hydrolase [Streptococcus pneumoniae Hungary19A-6]
          Length = 271

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 88/308 (28%), Gaps = 65/308 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ ++ N ++L E+E               + +L +     D D++  QE+      ++V
Sbjct: 1   MKFLTLNTHSLMEKE-----------AEEKFQILLEDILEKDYDLICFQEINQEMTSSEV 49

Query: 84  FPKNTWCIFYST----------------------ERLINHSKRDSNNDIHTAIAVRKKNV 121
              + +    +                                   +  H  +A+  K  
Sbjct: 50  EVNDLYQALPAAEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTP 109

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
              ++   L+   D  +    RR       ++GK++ V  +HL  +      E     + 
Sbjct: 110 IEARE--ILVSDVDDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAV 167

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                                 P ++AGDFN      G        +   D+     ++ 
Sbjct: 168 LKKLN----------------KPLLLAGDFNNPAGQEGYQAILASPLGLQDAFEVTQEKS 211

Query: 242 DSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            S     +    K       IDY    +                +     ++  ++SDH 
Sbjct: 212 GSYTVPPEIDGWKGNTEPLRIDYVFTTKELA---------VENLHVVFDGNKSPQVSDHY 262

Query: 297 PISIDYDF 304
            ++   ++
Sbjct: 263 GLNAMLNW 270


>gi|77458763|ref|YP_348269.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens
           Pf0-1]
 gi|77382766|gb|ABA74279.1| putative endonuclease/exonuclease/phosphatase family protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 260

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 86/291 (29%), Gaps = 52/291 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74
           A V  ++R+++ N +                        LR+  ++  AD+VFLQE+   
Sbjct: 12  APVIHRLRVLTVNTHKGFTALNRRF----------ILPELREAVRSTSADLVFLQEVVGE 61

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
              +++    +P+ +   F +     +  + +     D H   A+  K      ++  + 
Sbjct: 62  HERHSSRYHEWPQTSQYEFLADSMWSDFAYGRNAVYPDGHHGNALLSKYPIREYRNLDVS 121

Query: 132 GAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                      R  +  ++++ G  ++  + +HL        L+                
Sbjct: 122 ITG-----PERRGLLHCVLDVPGHAEVHAICVHLSLLESHRQLQLQLLCQLL-------- 168

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
                 +      P +IAGDFN                  +     F +           
Sbjct: 169 ------ESLPDNAPVIIAGDFNDWQLQGNV-----ALARRDYLHEAFERHHGRPAKTYPA 217

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               + +D   +   +               +         LSDH P++++
Sbjct: 218 RFPLLRLDRVYLRNASSHN-----------PQILGNKPWTHLSDHLPLAVE 257


>gi|293568433|ref|ZP_06679753.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1071]
 gi|291588769|gb|EFF20597.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1071]
          Length = 277

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 82/310 (26%), Gaps = 66/310 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ ++ N +  L  +                   L       D +++ LQE+       +
Sbjct: 1   MKFMTLNTHSWLEPEP------------EKKLQELADKILLEDYEVIALQEINQLLESEE 48

Query: 83  VFPKNTWCI------------------------FYSTERLINHSKRDSNNDIHTAIAVRK 118
           V P                                              +      A+  
Sbjct: 49  VEPAKLMKFCQVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLT 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K    L+     +           R+ +    +I+ + I+V   H   +    S      
Sbjct: 109 KK--TLESQVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFY--- 163

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   + + L+++     E+ VP    GDFN  ++  G        +   DS +   
Sbjct: 164 -------FEWKNLENY---FLETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVAN 213

Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           ++  +       +  +    K+ ID+  +          E      Y           +S
Sbjct: 214 EKGKAATVEKKIDGWEQNTEKLRIDFIFV---------PEGMQVKKYQRIFDGIDSPIIS 264

Query: 294 DHCPISIDYD 303
           DH  + I+ D
Sbjct: 265 DHYGVEIELD 274


>gi|300770432|ref|ZP_07080311.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762908|gb|EFK59725.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 343

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/356 (9%), Positives = 79/356 (22%), Gaps = 66/356 (18%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M + ++L   FF V      ++ +R++ +NI                      +  +   
Sbjct: 1   MRKIFLLLQFFFTVAVWGQESKNLRVLQFNIWQEGTVVPGG------------FEAIANE 48

Query: 61  AKNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSN----NDIHTA 113
              L  D++   E+ +Y+      ++                N S   S     +     
Sbjct: 49  IARLKPDLIAFSEVRNYHDTKFNERIVEALAQRGLTYYSFFSNDSGLLSRYPLISYGRVG 108

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
              + K         P  G   +F  A             G                D++
Sbjct: 109 DDSKFKGTIHKAVVSPSEGKTIAFYTAHLEYTKGANYLPRGYHADTWAKLEAPIVDADAV 168

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND----------- 222
               + S    + Q     +   ++       ++ GDFN                     
Sbjct: 169 LANNNSSSRDEAIQI--FMEDAAKEISVGHEVILGGDFNEPSYLDWTARTKDKYDHKGLI 226

Query: 223 --DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--------------------PIDYF 260
                  +          ++       +                            ID+ 
Sbjct: 227 ITWTITKMLAEGGFQDAFRKVYPDEVTHPGFTFPSYNKDVEISKLVWGASADERDRIDFI 286

Query: 261 VMDQNAYKFLIQESFS------------EILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     ++ +                +  +  I       +DH  + ID+ +
Sbjct: 287 FYKSGQRLKPVKAAVVGPKESILRGEKTTEISKDKFILPLAVWPTDHKALLIDFQW 342


>gi|326779700|ref|ZP_08238965.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326660033|gb|EGE44879.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 341

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 82/300 (27%), Gaps = 72/300 (24%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L +   L+   +     + + + N+N  +     +                 Q      A
Sbjct: 110 LNVFGGLLTDKSGGGGDLTVATHNVNAGNPDPDGT----------------AQQVAGSGA 153

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V LQE+                 ++S +  +                        L  
Sbjct: 154 DVVALQELPGRQVSTYEKSLADRYPYHSVQGTVG-----------------------LWS 190

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS 185
            YPL   K    + G  RA+   VE    ++ V   HL S    L +         S   
Sbjct: 191 KYPLADTKPVDIKMGWTRAMRSTVETPQGEVAVYVAHLPSVRVKLHAGFTANQRDAS--- 247

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             A  L + I    E +   V+ GD N  +N         ++++   + +R  +      
Sbjct: 248 --ADALGEAIAD--ERVERVVLLGDLNGTMND--------RSLNAVTAQMRSTQGAAGDG 295

Query: 246 NANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        ID  ++                      + +     SDH PI+   +
Sbjct: 296 FGFSWPASFPMARIDQIMVKG------------VEPLASWTLAATD---SDHLPIAARVE 340


>gi|182439049|ref|YP_001826768.1| hypothetical protein SGR_5256 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467565|dbj|BAG22085.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 341

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 82/300 (27%), Gaps = 72/300 (24%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L +   L+   +     + + + N+N  +     +                 Q      A
Sbjct: 110 LNVFGGLLTDKSGGGGDLTVATHNVNAGNPDPDGT----------------AQQVAGSGA 153

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V LQE+                 ++S +  +                        L  
Sbjct: 154 DVVALQELPGRQVSTYEKSLADRYPYHSVQGTVG-----------------------LWS 190

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS 185
            YPL   K    + G  RA+   VE    ++ V   HL S    L +         S   
Sbjct: 191 KYPLADTKPVDIKMGWTRAMRSTVETPQGEVAVYVAHLPSVRVKLHAGFTANQRDAS--- 247

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             A  L + I    E +   V+ GD N  +N         ++++   + +R  +      
Sbjct: 248 --ADALGEAIAD--ERVERVVLLGDLNGTMND--------RSLNAVTAQMRSTQGAAGDG 295

Query: 246 NANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        ID  ++                      + +     SDH PI+   +
Sbjct: 296 FGFSWPASFPMARIDQIMVKG------------VEPLASWTLAATD---SDHLPIAARVE 340


>gi|126738186|ref|ZP_01753907.1| hypothetical protein RSK20926_06617 [Roseobacter sp. SK209-2-6]
 gi|126720683|gb|EBA17388.1| hypothetical protein RSK20926_06617 [Roseobacter sp. SK209-2-6]
          Length = 342

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/344 (11%), Positives = 79/344 (22%), Gaps = 75/344 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNS-VKRTTSDYT------------LLRQYAKNLD----ADI 68
           +  WN+  L   E          +R   D               L      ++     DI
Sbjct: 6   VAFWNVENLFGPEDHPQRIPWVAERMARDLEGWSEALYARKQDRLAHVITRMNEGAGPDI 65

Query: 69  VFLQEMGSYNAVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           + L E+     +  +     +     +        H KR  +       A      R   
Sbjct: 66  LGLCEVEDRFVLEDLKHRVGEELGRNYGIVHADNQHDKRGIDT------AFLFDQGRYSV 119

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE-NTYSPSCSL 183
               +        R G R  ++      + +++ +L  H  S            + +   
Sbjct: 120 DPAHIFSH-FVIRRTGTRDILQATFRTADDREVILLANHWPSRSGGAEKSAGFRATAGET 178

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           L+   Q +++    + +     +  GDFN          +   T +  D       +  +
Sbjct: 179 LAYWHQRIRE--EARDKERACILALGDFNDDPFDPSLRFNANATRERGDVERAESPKFYN 236

Query: 244 RCNAN-------------------KNLRNKIPIDYFVMDQNAYKF------LIQESFSEI 278
                                       +    D  +  +            +  S    
Sbjct: 237 FTWEYLSTEAVDSQGNPRLLDGSLYYKNDGNLFDQILAARPLLDRGAAGFKAVAGSAGIF 296

Query: 279 LYNEDDIKSRGKRL-------------------SDHCPISIDYD 303
              E      G+                     SDH P+ I  +
Sbjct: 297 ALPEMVSHRTGQGPIRFGLPKGDPARNINEEGFSDHFPVKILLE 340


>gi|207742014|ref|YP_002258406.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609]
 gi|206593400|emb|CAQ60327.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609]
          Length = 261

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 81/304 (26%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +        +                +    +AD V +QE+         
Sbjct: 2   LRIISANLNGVRSAASKGFF---------------DWMGKQNADFVCVQELKCAQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +        +         A    +           ++G       A  R
Sbjct: 43  ---DMTPEFLAPHGYHGVFQHAVKKGYSGAGLYARHQP-----DDVIVGFDGGEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ ++ +++ S    +  +        L  Q    L+       E   
Sbjct: 95  Y-----VEARYGKLSIISVYVPSGSSGEERQQAKYRFMDLFMQHLVDLRH------EKGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N     +   +                +   +      +   +  D+R    
Sbjct: 144 EVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWLTRLFDEVGYVDVFRTLDTRPEQY 203

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          + S             R  + SDH P++
Sbjct: 204 TWWSNRGQAYAKNVGWRIDYQIATPGIAATARRTSI-----------FRDIKFSDHAPLT 252

Query: 300 IDYD 303
           +DYD
Sbjct: 253 VDYD 256


>gi|307700018|ref|ZP_07637067.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16]
 gi|307614779|gb|EFN93999.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16]
          Length = 289

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 68/277 (24%), Gaps = 43/277 (15%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            +  N D+++  LQE+ +          + + +     R+   +         +A ++  
Sbjct: 21  DWLANDDSELYCLQEVRATVEDTVTLFGSAFDVRVWPCRIKGRAGVALVARRDSAFSLGD 80

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
               +    Y   G  D  S    R     +    G  + ++  +L S       +    
Sbjct: 81  TREGLPAALYDESGEPDVDS---GRWLEAEVSLPGGGSLTLVSAYLHSGELESEKQEQKL 137

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------- 223
                 +++   L              ++ GDFN         +                
Sbjct: 138 AYLERATKRLSELAATARAAGAGAAQALVCGDFNIVRTERDIKNWKPNHNKVSGVMDEEI 197

Query: 224 --FWKTIDPNDSLIRFPKEKDSRC-------NANKNLRNK---------IPIDYFVMDQN 265
                 +  +          D                  +           IDY +    
Sbjct: 198 AILDAWMSDSLEGTAKHPAVDVTRALLGEVQGPYTWWSQRGKAFDNDAGWRIDYQMATPG 257

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 + S            S  +R SDH P+SI Y
Sbjct: 258 LATHAAEVSVW-------RAPSYAERWSDHAPLSITY 287


>gi|300860043|ref|ZP_07106131.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TUSoD Ef11]
 gi|300850861|gb|EFK78610.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TUSoD Ef11]
 gi|315144321|gb|EFT88337.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2141]
 gi|315162905|gb|EFU06922.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0645]
          Length = 351

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 82/316 (25%), Gaps = 58/316 (18%)

Query: 22  QKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           Q + LV++NI               G ++   +      + T +    K L A I   QE
Sbjct: 54  QSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEGTLKELPAMIYLFQE 113

Query: 74  MGSYNA----------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           +   +           + K    N+   +      +            + +         
Sbjct: 114 VDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPLPPIGRVE-SGLLTLSNEKIT 172

Query: 124 LQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +   L           N  R  +E    I G    ++  +L    + +          
Sbjct: 173 EAKRIALPNPFRWPVSISNLKRALLETRFPIEGTDKELVVFNLHLEAYDNGEG------- 225

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNR----------------KINYLGNNDDFW 225
                Q++ L D ++Q+       +  GDFN+                    +   D   
Sbjct: 226 --KIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWAPGEIDPADLPK 283

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 D      +  +     +        ID F++  N     ++    +  Y     
Sbjct: 284 HFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYT---- 339

Query: 286 KSRGKRLSDHCPISID 301
                   DH P+ ++
Sbjct: 340 --------DHQPVKME 347


>gi|194219488|ref|XP_001500898.2| PREDICTED: CCR4-NOT transcription complex, subunit 6 [Equus
           caballus]
          Length = 557

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/351 (11%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADIV LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV-------PFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S V       P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRSLQSSVLGEFGAIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 489 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 539


>gi|325119989|emb|CBZ55542.1| hypothetical protein NCLIV_059670 [Neospora caninum Liverpool]
          Length = 455

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 77/291 (26%), Gaps = 36/291 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYN 78
            + +V+WN+N+++          S  R T  +     + + ++ DI+ LQE+        
Sbjct: 98  PLSIVTWNVNSIA----------SRIRDTRQWFYFSSFLQKVNPDILCLQEVKLAAHGPP 147

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              +                ++  +     +    +    K +  L             +
Sbjct: 148 GAKRGDGMPRDRSRIKESDKVSSVEAREIREALNTLLPDHKLLISLADWRYSGQMMFIRN 207

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                R +            VL  +  +                 + +    LK      
Sbjct: 208 DLPEGRIILAEFS----PFCVLTTYSPNNGGTPKSFERRRLWDERMLEFVTQLKK----- 258

Query: 199 KESLVPFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                P V  GD N      +            +  D  I       + C   +  R + 
Sbjct: 259 -----PLVWVGDLNCAPEDIDLSDPEQFRSVIHESADGTIDPDNIGQAGCTDAERRRFRA 313

Query: 256 PI----DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +    D  +  ++ +           L    D  +     SDHCP+ + +
Sbjct: 314 ILERGWDQCMCLKDCFGGSGPRGMLRGLGMRLDHIA-NFFGSDHCPVLVRF 363


>gi|169595532|ref|XP_001791190.1| hypothetical protein SNOG_00506 [Phaeosphaeria nodorum SN15]
 gi|111070881|gb|EAT92001.1| hypothetical protein SNOG_00506 [Phaeosphaeria nodorum SN15]
          Length = 377

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 97/334 (29%), Gaps = 65/334 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT------LLRQYAKNLD-ADIVFLQE 73
              +R+ SWN+N ++     S+          D         LR   +      I+FLQE
Sbjct: 39  TNSIRIFSWNVNGIAPFLQKSIKSFFAASDPQDKEDNIPPPSLRGILQRHKWPSILFLQE 98

Query: 74  MG-------SYNAVAKVFP----------KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +        + +AV                 T+   ++     ++++    +     +  
Sbjct: 99  VKIATKDTKTQDAVKAAVNTKFPSETDDEGPTYEAHFTLPNDPHNARGLRGSGKLYGV-- 156

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
               +R   Q+   +  +        R ++ + +     K+ + +I+  +       + T
Sbjct: 157 -CSILRTDLQNPYQINIRTVDWDKEGRISI-VQLTGKSAKLAIFNIYAVNGTSNPYRDPT 214

Query: 177 YSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFNRKIN---------------- 216
                     +       + Q+    + +    ++AGD N   +                
Sbjct: 215 TGVVTGTRHDRKLQFHRLLMQECLDLEAAGWRVLLAGDMNVAPDARDGHPKLRTFPKQHA 274

Query: 217 --YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-----NLRNKIPIDYFVMDQNAYKF 269
                 ++ F +        +      + R             +   +DY V  + A+  
Sbjct: 275 LNRADFHERFLEGTGLGGVDVWREMHGNERRYTYYPRGREWGSSCDRVDYVVAGRGAWDA 334

Query: 270 --LIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +      +            + +SDHCP+ +D
Sbjct: 335 GMVKASGILDT--------EGERGMSDHCPVWVD 360


>gi|154507757|ref|ZP_02043399.1| hypothetical protein ACTODO_00239 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797391|gb|EDN79811.1| hypothetical protein ACTODO_00239 [Actinomyces odontolyticus ATCC
           17982]
          Length = 474

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/376 (11%), Positives = 97/376 (25%), Gaps = 92/376 (24%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-- 75
           ++    + + ++N  +L+      L  +      +  + + +  + +D DI+ + E    
Sbjct: 37  SATTDALTVATFN-ASLNRDSPGQLLDDLATSGNTQASNVAETIQRVDPDIILINEFDYD 95

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSN---------------------------- 107
           + +A   +F  N   + ++    +++    S                             
Sbjct: 96  ANSAAVDLFRTNYLEVPHNGAAPVSYPYAWSGPVNTGVPSGFDLDKDGTNNGPSDAWGFG 155

Query: 108 -NDIHTAIAVRKKNVRVLQQ-----------------SYPLLGAKDSFSRAGNRRAV--- 146
                    V  K      Q                      G+         R  +   
Sbjct: 156 KFPGQYGFVVYSKYPIKTDQIRTFQNFLWKDMPGALLPTNADGSGWYSDEILQRFPLSSK 215

Query: 147 ---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-- 201
              +L V+++G  + VL  H     F    +     +   +   + ++ +      +   
Sbjct: 216 THADLPVDVDGTTVHVLAAHPTPPSFDGPEQRNKKRNFDEIRVWSDYVANRADYLYDDNG 275

Query: 202 -------LVPFVIAGDFNRKINYLGNNDDFW----------------------KTIDPND 232
                     FVI GD+N       +                             +    
Sbjct: 276 VKGGLSTDANFVILGDYNSDPLDGDSYPGAIDQLLTSPRIVDTMPTSQGGPSEAKLQGGA 335

Query: 233 SLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +L      K    + N + R     IDY +   N    + +        +++  +  G  
Sbjct: 336 NLKHKTDPKYDTGDFNDDPRPGNLRIDYVL--PNTGTQVDEAQVFWPTRDDELFRLTGLH 393

Query: 292 L---SDHCPISIDYDF 304
               SDH  +     F
Sbjct: 394 PFPTSDHRMVWTKLRF 409


>gi|289566966|ref|ZP_06447369.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium D344SRF]
 gi|294613977|ref|ZP_06693909.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1636]
 gi|289161234|gb|EFD09131.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium D344SRF]
 gi|291593171|gb|EFF24748.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1636]
          Length = 277

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 82/310 (26%), Gaps = 66/310 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ ++ N +  L  +                   L       D +++ LQE+       +
Sbjct: 1   MKFMTLNTHSWLEPEP------------EKKLQELADKILLEDYEVIALQEINQLLESEE 48

Query: 83  VFPKNTWCI------------------------FYSTERLINHSKRDSNNDIHTAIAVRK 118
           V P                                              +      A+  
Sbjct: 49  VEPAKLMKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLT 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K    L+     +           R+ +    +I+ + I+V   H   +    S      
Sbjct: 109 KK--TLESQVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFY--- 163

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   + + L+++     E+ VP    GDFN  ++  G        +   DS +   
Sbjct: 164 -------FEWKNLENY---FLETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVAN 213

Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           ++  +       +  +    K+ ID+  +          E      Y           +S
Sbjct: 214 EKGKAATVEKKIDGWEQNTEKLRIDFIFV---------PEGMQVKKYQRIFDGIDSPIIS 264

Query: 294 DHCPISIDYD 303
           DH  + I+ D
Sbjct: 265 DHYGVEIELD 274


>gi|111018178|ref|YP_701150.1| transmembrane protein [Rhodococcus jostii RHA1]
 gi|110817708|gb|ABG92992.1| possible transmembrane protein [Rhodococcus jostii RHA1]
          Length = 321

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/293 (8%), Positives = 71/293 (24%), Gaps = 59/293 (20%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           ++       +   ++ ++  NI   +                +D   L +  ++   D++
Sbjct: 84  LYVANGAVTASGPELTVMQANIWLGN----------------ADADSLVRQIRDRGVDVL 127

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            + E+ +  AV ++           +  +       +         +  +     +  + 
Sbjct: 128 TVNEL-TPEAVDRLVAAGIESTLPFSFLMPGSGGEGTG--------IWSRYPLTDKVHHS 178

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                          A+   VE+       L        +                    
Sbjct: 179 EFVLS----------ALSARVELPDGASTALYAFHPVPPWPSDPSLWSRE--------MD 220

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            +K  +        P +++GDFN   +++   +            +    +     +   
Sbjct: 221 RIKAILDAVPADSGPVIVSGDFNSTRDHVKYRNLVTGRYRDAADQVGAGIQNTYPADRQP 280

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                I ID+ V      + +     +                SDH  +    
Sbjct: 281 LP-PMIAIDHIVTSGAQAQSVESVVLT---------------GSDHRGLIAKI 317


>gi|29612526|gb|AAH49984.1| Cnot6 protein [Mus musculus]
          Length = 399

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 31  FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 90

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 91  FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 150

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 151 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 210

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 211 SDVKLVQTMMFLSEVKNIIDKASRSLKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTG 270

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 271 GVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 330

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 331 IIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 381


>gi|111658349|ref|ZP_01409037.1| hypothetical protein SpneT_02000489 [Streptococcus pneumoniae
           TIGR4]
          Length = 260

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 6   EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 65

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              N  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 66  LSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 123

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 124 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 167

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 168 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 227

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 228 KELA---------VENLHVVFDGNKSPQVSDHYGLNAILNW 259


>gi|332076038|gb|EGI86504.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA41301]
          Length = 260

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 6   EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 65

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              N  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 66  LSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIETRE--ILVSDVDDPTDYHTRRVALA 123

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 124 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 167

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 168 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 227

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 228 KELA---------VENLHVVFDGNKSPQVSDHYGLNAMLNW 259


>gi|297671005|ref|XP_002813639.1| PREDICTED: deoxyribonuclease gamma-like isoform 1 [Pongo abelii]
          Length = 275

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 82/285 (28%), Gaps = 52/285 (18%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A  +R+ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N 
Sbjct: 17  SALALRICSFNVRSFGE---------SKQEDQNAMDVIVKIIKRC--DIILVMEIKDSN- 64

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             ++ P                              + ++ +  +++SY     +D    
Sbjct: 65  -NRICPILMEK-------------------------LNREKLVSVKRSYHYHDYQDGDED 98

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +R    +  +     +    I         S+         L+         W     
Sbjct: 99  VFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSV----REIDELVEVYMDVKHRW----- 149

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                F+  GDFN   +Y+         +  +   +    +++              I  
Sbjct: 150 -KAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRI-- 206

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
            +  Q     ++ +S S   + +    +  + L  SDH P+    
Sbjct: 207 VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 251


>gi|119474910|ref|ZP_01615263.1| hypothetical protein GP2143_13861 [marine gamma proteobacterium
           HTCC2143]
 gi|119451113|gb|EAW32346.1| hypothetical protein GP2143_13861 [marine gamma proteobacterium
           HTCC2143]
          Length = 296

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 98/310 (31%), Gaps = 44/310 (14%)

Query: 6   VLALVFFLVPCTASVAQ-------KVRLVSWNINTLSEQEGVSLWKNSVKRTTS-----D 53
           ++ L+  ++  + + +Q       ++ L+ +N + L              +        D
Sbjct: 10  LMLLLASVISWSTTASQNDASRSTELNLLVYNTHGLPAIFAADEPVKRFPQIGKLTEGYD 69

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            +LL++   + D   + LQ + +  A A+                        +N    A
Sbjct: 70  LSLLQEDFAHHD---LLLQHLKNPTAAARGSDALVPEC----WLCSGSGLTLVSNLQTPA 122

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             +R       Q S  L    D F++ G    + ++   +G +I++++ HL +       
Sbjct: 123 WQIRTTFEPFKQCSGWLNRLNDCFAQKG--FQLIIMEHTSGHRIYIVNTHLDAG------ 174

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                P     + Q + +   I + + +    + AGD N   +   +N      +   + 
Sbjct: 175 --RSEPDREARASQLEQIA-LILEAEATNEAILFAGDLNLDWDTQADNQLLKNFVGRLNL 231

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +        S             +DY            +  S  +I +  +        L
Sbjct: 232 VAAQKGGDVSNGW--------ATLDYIYYRSGEKTSLTLIGSGEDIAFTNESKP-----L 278

Query: 293 SDHCPISIDY 302
           SDH  +   +
Sbjct: 279 SDHPALFARF 288


>gi|108757091|ref|YP_631342.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108460971|gb|ABF86156.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 427

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/235 (11%), Positives = 56/235 (23%), Gaps = 44/235 (18%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +     + ++++NI     +    L                        D++ LQE    
Sbjct: 67  SPRGPGLTVMTYNILLGGHRRQALLDYFDNLEARGRL-----------PDVLGLQEANVP 115

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA---- 133
            A   V     +    + +             +    A   ++  V    +         
Sbjct: 116 IA---VLLAERYGFHLAYQGHDG----GPGARLMNGKAFLTRHPLVDAAHFTYATPDAER 168

Query: 134 --------KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                    D      +R A+ + +E+ G  + + ++H        +  N          
Sbjct: 169 DAAIMRRGGDPCEIPEDRGALYVRLEVEGHPVVLYNVHHTLGDSGINARNLR-------- 220

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            Q   L          ++  V  GDFN               +   D      + 
Sbjct: 221 -QLNALLQH-----REVMHAVALGDFNANTAIKSGGSWLMAHLRTYDDTDTVEEY 269


>gi|153808285|ref|ZP_01960953.1| hypothetical protein BACCAC_02573 [Bacteroides caccae ATCC 43185]
 gi|149129188|gb|EDM20404.1| hypothetical protein BACCAC_02573 [Bacteroides caccae ATCC 43185]
          Length = 673

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 70/301 (23%), Gaps = 55/301 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MGSYNAVAK 82
           ++++ WNI    +  G                 +    K   AD+V +QE  GS   +AK
Sbjct: 405 LKVLQWNIWHGGKHLGKDG-----------RERIIDLIKQSGADVVTMQEGYGSQEMIAK 453

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               N           +                     + +       L A         
Sbjct: 454 AIGFNLQTPSPGDNLCLFSRYPIQKIKTKNTFYSNPAIITLPSGKKVYLNACWLRYAYRP 513

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                                  +   +D+       S   L    + L++ +    +S 
Sbjct: 514 EY-----------------TCYYANYGMDTHRWAAEDSILALVDMKRLLENDLIPYVDSS 556

Query: 203 VPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDSLIRFPKEKDSRC 245
           +P +I GDFN   +    +                          +      P E +   
Sbjct: 557 MPVIIGGDFNSCSHLDWTHKAAPIHFGYIAEELPVSRYMLDKGFRDTFREINPDELERGE 616

Query: 246 NAN---KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         ID+    +      +       +   DD+        DH  +   +
Sbjct: 617 GTYAVIYGQSQTSRIDFI-YSKGNGIKTVASKIVRTMPEIDDVWPG-----DHAAVLTVF 670

Query: 303 D 303
           +
Sbjct: 671 E 671


>gi|322826414|gb|EFZ31039.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi]
          Length = 419

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 80/318 (25%), Gaps = 67/318 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80
           ++ ++WN+  L                  D   +++  +    D + LQE          
Sbjct: 120 LKFITWNVAGLRGL------------LRKDGQAIQRLLEEERPDALCLQETKLNPDDPQN 167

Query: 81  AKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            K+     +C      R    +S   +      A   +   V+             S   
Sbjct: 168 VKLGEVPGYCFVDHVCRAKKGYSGTRTYIKNTAATEWKTVTVKGFDTLKSPQDVGHSDGD 227

Query: 140 AGNRRAVELLVEINGK-----KIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
              R  +       GK      + +++ ++ +    L+ L          + Q    L  
Sbjct: 228 EEGR-VLTTYFGTQGKGNETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCALGR 286

Query: 194 WITQKKESLVP-----FVIAGDFNR-------------------KINYLGNNDDFWKTID 229
                KE         F+ AGD N                              F +T+ 
Sbjct: 287 SYNHGKEEGDAPSLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLR 346

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
             +++  F                +           +DYFV+     + ++         
Sbjct: 347 VANAVDTFRALYPKAAPVYTFWSARINGRDRGLGWRLDYFVVSAALARHVVDC------- 399

Query: 281 NEDDIKSRGKRLSDHCPI 298
                       SDHCP+
Sbjct: 400 ----FTMPHVMGSDHCPL 413


>gi|291299746|ref|YP_003511024.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568966|gb|ADD41931.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 315

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 84/328 (25%), Gaps = 74/328 (22%)

Query: 13  LVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           L   + + AQ    +++++S+N+     Q      K              ++ K+  AD+
Sbjct: 22  LATASTAHAQDEAAELKVMSFNLWHGGSQVNDYRAKQ------------VEFIKSTGADV 69

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + LQE  S  +  ++     W    +                   I  R + V   QQ  
Sbjct: 70  ITLQE-SSVTSARELAKALDWDYLQADADR--------------GIISRYEIVDDTQQPS 114

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                      +G R AV     +        D    +    + L      + S  + Q 
Sbjct: 115 NAGFGVHIELDSGQRVAVW-NAHLGYDPYGPYDACFDNMSVDEIL---EREAESGRTGQI 170

Query: 189 QWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----- 241
             +   +     +    P ++ GDFN   +     D    T D +      P        
Sbjct: 171 TDILADMRDDLANADQTPVLLTGDFNAPSHL----DWTAATADSHCGYSDIPWPTSVKPA 226

Query: 242 ------------------DSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQES 274
                                  +    +          +  IDY +          Q  
Sbjct: 227 EAGLTDSFREANPDPAAVPGNTWSPVYPKHDGSTGADEPQDRIDYILYKGGLTVTDSQAL 286

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    D     +  SDH  +   +
Sbjct: 287 VVGEPQPVPDHAD-NEWTSDHAAVLTTF 313


>gi|288922333|ref|ZP_06416526.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
 gi|288346325|gb|EFC80661.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
          Length = 321

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/289 (10%), Positives = 73/289 (25%), Gaps = 64/289 (22%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                + ++R+++ N+   + + G                 L    ++   D++ L E+ 
Sbjct: 92  NAPQGSARLRVMAANLLYHNAEAG----------------RLGDQIRHASPDVLVLVEL- 134

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           S   + K+          S              +     AV  +       +  + G   
Sbjct: 135 SPLTLTKLRD--------SGALADYRYSEVHPQEGAFGAAVFSRFPLSDAATPEVAGYSS 186

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                     +   V ++ ++ +V+                +      L  + +      
Sbjct: 187 ----------LRATVRVDERRSFVVHAVHTIAPTSGEYARAWRDQLDHLRTEVEA----- 231

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK- 254
                S +P V+AGDFN   +     +     +              +            
Sbjct: 232 -----SRLPVVLAGDFNATRDNRPLRELISAGVRD---AHDVVGAGWTPTWNASMFAVPP 283

Query: 255 -IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              ID+ +                  +     +   +  SDH P+  D 
Sbjct: 284 IARIDHILASPA--------------FAITGYQIGSEFGSDHKPVLADL 318


>gi|188493408|ref|ZP_03000678.1| cytolethal distending toxin B [Escherichia coli 53638]
 gi|253801079|ref|YP_003034080.1| type III cytolethal distending toxin protein CdtB [Escherichia coli
           Vir68]
 gi|331668153|ref|ZP_08369005.1| cytolethal distending toxin subunit B (CDT B) [Escherichia coli
           TA271]
 gi|2218090|gb|AAC45443.1| cytolethal distending toxin-IIIB [Escherichia coli]
 gi|23574039|emb|CAD48850.1| cytolethal distending toxin B [Escherichia coli]
 gi|38154548|gb|AAR12198.1| cytolethal distending toxin B [Escherichia coli]
 gi|38154552|gb|AAR12201.1| cytolethal distending toxin B [Escherichia coli]
 gi|38154556|gb|AAR12204.1| cytolethal distending toxin B [Escherichia coli]
 gi|119951946|gb|ABM10847.1| cytolethal distending toxin B [Escherichia coli]
 gi|188488607|gb|EDU63710.1| cytolethal distending toxin B [Escherichia coli 53638]
 gi|239793082|dbj|BAH72968.1| cytolethal distending toxin B [Escherichia coli]
 gi|239793098|dbj|BAH72980.1| cytolethal distending toxin B [Escherichia coli]
 gi|239793102|dbj|BAH72983.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835430|dbj|BAH78128.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835442|dbj|BAH78137.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835446|dbj|BAH78140.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835482|dbj|BAH78167.1| cytolethal distending toxin B [Escherichia coli]
 gi|253721254|gb|ACT33563.1| type III cytolethal distending toxin protein CdtB [Escherichia coli
           Vir68]
 gi|331064667|gb|EGI36574.1| cytolethal distending toxin subunit B (CDT B) [Escherichia coli
           TA271]
          Length = 269

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 99/304 (32%), Gaps = 43/304 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++KY+++L+ FL     +     R+ +WN+   S         N           +RQ  
Sbjct: 1   MKKYIISLIVFLSFYAQADLTDFRVATWNLQGASATTESKWNIN-----------VRQLI 49

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              +A DI+ +QE                    +   + +          + +   R + 
Sbjct: 50  SGENAVDILAVQE----------AGSPPSTAVDTGRVIPSPGIPVRELIWNLSTNSRPQQ 99

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVEL----LVEINGKKIWVLDIHLKSFCFLDSLENT 176
           V +   +    G + + +   NR+A E+     V   G+ +  + I   +F    ++   
Sbjct: 100 VYIYFSAVDAFGGRVNLALVSNRQADEVFVLRPVRQGGRPLLGIRIGNDAFFTAHAIATR 159

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + + +L+ +   + +D         + ++I GDFNR+ + L  N               
Sbjct: 160 NNDAPALVEEVYSFFRDS-RDPVHQAINWMILGDFNREPDDLEVNLTVPVRNASEIIFPA 218

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            P +   R            +DY V                +         R +  SDH 
Sbjct: 219 APTQTSQRT-----------LDYAVAGNAVAFRPFP-----LQAGIVYGARRTQMSSDHY 262

Query: 297 PISI 300
           P+ +
Sbjct: 263 PVGV 266


>gi|84496163|ref|ZP_00995017.1| hypothetical protein JNB_01550 [Janibacter sp. HTCC2649]
 gi|84382931|gb|EAP98812.1| hypothetical protein JNB_01550 [Janibacter sp. HTCC2649]
          Length = 225

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 68/282 (24%), Gaps = 66/282 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81
            +R+ S+N     E    +                 +  + +D D++ LQE+        
Sbjct: 3   TIRIASYNTRDFLEDPYAA----------------ARVVRAIDPDVLCLQEVPRRLFSTR 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V      C    + R                +     +   + +               
Sbjct: 47  RVANFARHCGMSWSGRHRGSGGTTIFTSQRVDVVESIHHRLRVAR------------LQR 94

Query: 142 NRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R      V   G + + V  +HL                    + +       I Q   
Sbjct: 95  TRGFAVARVAAPGCEPVAVASVHLSLD-----------------AHERAAHAQVILQTIN 137

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++AGD N   +            D   +     +            R +  +D  
Sbjct: 138 VGGEVILAGDLNEGDSG-----------DAWKAFAGVMRLVSPTTPTYPATRPRKVLDVI 186

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       E   ++   E D+ +     SDH P  +D 
Sbjct: 187 FASAGLQ----AEPHVDLPIAEADLIAG----SDHRPTWVDI 220


>gi|242266565|gb|ACS91130.1| APN2 [Microsporum gypseum]
          Length = 596

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/308 (10%), Positives = 63/308 (20%), Gaps = 77/308 (25%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA 115
                L+ADIV  QE  +   +    +     W  ++S   +   +S            A
Sbjct: 22  AMFDILEADIVVFQEAKIQRKDLQDDMVLVPGWDCYFSLPRQKKGYSGVVIYTRSSKCAA 81

Query: 116 VRKKNVRVLQQSYPLLGAKDSF--------------SRAGNRRAVELLVEINGKKIWVLD 161
           +R +         P                                  ++  G+ + V  
Sbjct: 82  IRAEEGITGTLCPPNSSTPFRQLTASEQIGGYPSVEQMEELSEVDPATLDSEGRCLIV-- 139

Query: 162 IHLKSFCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--- 216
               +F  +                      L+  +    +     ++ GD N       
Sbjct: 140 -EFPAFVLIGVYCPANRDESRDGFRLGFLSLLEARVRNLIKMGKRVILTGDLNISPAAID 198

Query: 217 -------------------YLGNNDDFWKTIDPNDSL-------------IRFPKEKDSR 244
                                     F   +    S                  +   +R
Sbjct: 199 SAPATERIKKNTETEEEYVSSPARRLFNGLVRRVGSTEETHDIEASPVLRDLCREFHPNR 258

Query: 245 CNANKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                IDY +   +   + ++ +              G   SDH
Sbjct: 259 TGMYTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQ-----------EGLMGSDH 307

Query: 296 CPISIDYD 303
           CP+     
Sbjct: 308 CPVYASIS 315


>gi|239613861|gb|EEQ90848.1| DNA lyase Apn2 [Ajellomyces dermatitidis ER-3]
          Length = 633

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 68/308 (22%), Gaps = 66/308 (21%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLI---NH 101
             R    +  +      LDADIV  QE  +   +    +   N W  F+S  +       
Sbjct: 24  PWREKRSFEAM---FDALDADIVIFQETKIQKKDLQDDMVLVNGWDCFFSLPKNSKCCPI 80

Query: 102 SKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
              +    I    A           +  P       +  A      ++       +   +
Sbjct: 81  RAEEGITGILCLPASVSPFPSPTSFRDLPEEAQIGGYPTAEQLALSDVDASTLDSEGRCM 140

Query: 161 DIHLKSFCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +   +F  +                +     L   +          ++ GD N   + +
Sbjct: 141 ILEFPAFVLIGVYCPANRDETRDGFRTGFVNILDARVRNLVAMGKRVIVMGDLNICGSEI 200

Query: 219 GNNDDFWKTIDPNDS-----------------------------------LIRFPKEKDS 243
            +     +    N +                                   +    K    
Sbjct: 201 DSARALEEIRKGNLTDSEFVSAPVRRVFNQLVYGGKVIGDRDQGRETPILVDLCRKYHPD 260

Query: 244 RCNANKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           R                     IDY + D+    +    +              G   SD
Sbjct: 261 RPGMYTCWEQRVNARPGNYGSRIDYVLCDKRMEDWFSASNIQ-----------EGLMGSD 309

Query: 295 HCPISIDY 302
           HCP+  D 
Sbjct: 310 HCPVFADL 317


>gi|167835069|ref|ZP_02461952.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           thailandensis MSMB43]
          Length = 270

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 78/308 (25%), Gaps = 66/308 (21%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L+      A ++  VSWN++      G + W             +R + ++  ADI FL
Sbjct: 7   VLLAEPLPAANEITAVSWNLHKGRSPLGFTAWD-----------AMRSWVESTHADIYFL 55

Query: 72  QEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           QE  +                   V  ++      I  + +  I               A
Sbjct: 56  QEAMARRMPRPVLASRFGTPMAEPVDDIWHCQATEIARALDWQIALGPNVFKPSWRHGNA 115

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174
           +   +   L   + +        R   R  +        G  + +L  HL          
Sbjct: 116 ILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGGAPVTLLCAHLALT------- 163

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                  +   +Q  W+  WI +   +  P V+AGDFN   N           +     L
Sbjct: 164 ------RAARLRQMHWIAHWIVRNASTG-PLVLAGDFNDWRNDSIP-------LFGEIGL 209

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                               + +D   +                             LSD
Sbjct: 210 SEVATLLGEPGRTFPAFSPALALDKMFVRGMTPLEWRAPG------------DETAWLSD 257

Query: 295 HCPISIDY 302
           H P     
Sbjct: 258 HLPYIARL 265


>gi|306829190|ref|ZP_07462380.1| RgfB protein [Streptococcus mitis ATCC 6249]
 gi|304428276|gb|EFM31366.1| RgfB protein [Streptococcus mitis ATCC 6249]
          Length = 271

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 78/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + LL Q   + D D++  QE+       +V   + +    +                
Sbjct: 17  EEKFQLLLQDILDKDYDLICFQEINQEITSPEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR   +
Sbjct: 77  LAEKGRSYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALV 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ GK++ +  +HL  +      E     +     +                 P ++A
Sbjct: 135 ETEVEGKELALASVHLSWWDKGFQEEWARFEAVLKDLK----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        ++  D+     +   S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLELQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +       G ++SDH  ++   ++
Sbjct: 239 KEL---------EVESLHVVFDGQNGPQVSDHYGLNAILNW 270


>gi|212213194|ref|YP_002304130.1| exodeoxyribonuclease III [Coxiella burnetii CbuG_Q212]
 gi|212011604|gb|ACJ18985.1| exodeoxyribonuclease III [Coxiella burnetii CbuG_Q212]
          Length = 259

 Score = 65.3 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 83/307 (27%), Gaps = 80/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +R+++ N+N +        +                + K   ADIV LQE  +   +   
Sbjct: 1   MRIITLNLNGIRAAARRGFF---------------DWLKRQKADIVCLQETKACLEITNG 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    +  +Y       +S           I  R+K  RV  +           +   
Sbjct: 46  DQFHPKGYHCYYHDAEKSGYSG--------VGIYCREKPDRVTTR------LGWEHADKE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      ++ +   + V  +++ S    +  +        +           +     S
Sbjct: 92  GRY-----IQADFGSLSVASLYMPSGTTGEHRQ-------KIKFDFMDRYMKRLKNIVHS 139

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              F+I GD+N                             +       +  F        
Sbjct: 140 KRSFIICGDWNIVHKDIDIKNFKSNQKHSGCLPEERAWLDEVFTKVGLVDAFRVVNQKP- 198

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +      ++           IDY V+  +    +  E              + KR SDH 
Sbjct: 199 DQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSERI-----------YKDKRFSDHA 247

Query: 297 PISIDYD 303
           P+ IDY+
Sbjct: 248 PLIIDYE 254


>gi|322708644|gb|EFZ00221.1| sphingomyelinase family protein, putative [Metarhizium anisopliae
           ARSEF 23]
          Length = 480

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/346 (11%), Positives = 78/346 (22%), Gaps = 82/346 (23%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMG 75
            ++  ++ L++ N   L     +                + ++   L+    IV LQE  
Sbjct: 21  PTLPSELTLLTLNCWGLLHISALRTP---------RLAEIGRHIAALEPTPHIVCLQECW 71

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----- 130
             +    +       + +                    +A+  +        +P      
Sbjct: 72  VQDDYRAIRDATRAILPHGKFYHSGAFGG--------GLAILSRWPIEESSMFPYKLNGR 123

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             A         +      V     +  ++++           E   S  C   + QA  
Sbjct: 124 PTAFWRGDWYVGKGVATAKVRYGPGRKDIIEVFNTHTHAPYESEPNDSYLC-HRTAQAWD 182

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPN----------- 231
           +   +    +     V  GDFN     L            D W+ + P+           
Sbjct: 183 IAKLVRGATDRGHLVVALGDFNMIPLSLAYRIITSGAPIRDTWRILHPDSSIGASDQAEE 242

Query: 232 ---------DSLIRFPKEKDSRCNANKNLRNKI----------------------PIDYF 260
                               S    N    +K                        IDY 
Sbjct: 243 KARGLPVPTAEHNLLVNGAASDTVYNTWRWSKQEQKKLKHDPCPVDPHTKDPQGKRIDYV 302

Query: 261 VMD----QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       ++++ +  EI             LSDH  +    
Sbjct: 303 FASTGDVSGGTGWIVKSAAVEI---TGRHPELNCSLSDHFGVRTTL 345


>gi|301793919|emb|CBW36315.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae INV104]
          Length = 271

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETLVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAMLNW 270


>gi|298345652|ref|YP_003718339.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063]
 gi|298235713|gb|ADI66845.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063]
          Length = 269

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/279 (10%), Positives = 74/279 (26%), Gaps = 42/279 (15%)

Query: 57  LRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           +  + +  + D++ +QE+   +       F    + +F +     N     +   I   +
Sbjct: 1   MTAFLERENIDVLAMQEIKCRNDQFPTLAFETAGYQVFVNGLNQWNGVAVAARQGISAHL 60

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI----HLKSFCFL 170
              +    + Q   P         +   R     +  +    ++V +     HL     L
Sbjct: 61  LGTEFYGAIDQ---PYFSVPPKPPQLEPRVLGVRVAGVECWSLYVPNGREVGHLHYQYKL 117

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
             L++  S     L    + L  ++                DF    +        +  +
Sbjct: 118 KWLDSLRSHVIRTLDTDPESLGLYLGDFNVAPRDEDVWDLADFAAATHVSEPERQVFAKL 177

Query: 229 DPNDSLIRF---------------PKEKDSRCNANKNLRN---KIP------IDYFVMDQ 264
              D++                   +                 +        ID+ +   
Sbjct: 178 LDPDTVADAVTLHDDLIGGLPGNLTEITRKFAPGWTYWDYQRARWRRNQGMKIDFALATP 237

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +            D  +  G++ SDH P+ +D++
Sbjct: 238 RLVSRVTGAYI-------DTAERDGEQPSDHAPVIVDFE 269


>gi|294628219|ref|ZP_06706779.1| FG-GAP repeat domain-containing protein [Streptomyces sp. e14]
 gi|292831552|gb|EFF89901.1| FG-GAP repeat domain-containing protein [Streptomyces sp. e14]
          Length = 569

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 88/313 (28%), Gaps = 53/313 (16%)

Query: 6   VLALVFFL-VPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           VLAL   + +    + A          +  VS+N+      +           +      
Sbjct: 34  VLALFGLVGLFPFTAHADSVAGADAPPLHFVSYNLCGNVCSDARGYDNQRRVDSVVAEAT 93

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
              +    +AD ++LQE+        +  +     F          + D+ +     +A+
Sbjct: 94  GATW----NADQLYLQEVCRPQY-DALLDRLQPHGFSGLYAATISGRADTCDGSDYGLAL 148

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K   +      L    +S               +N               +  S+   
Sbjct: 149 FTKGSVIASTVLDLRVGGESEPIKAPCVKTRTQYRVN---------------WGCSVHLD 193

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------------ 224
           +S   SL  Q+A  L     Q +++ +P V+ GDFN           +            
Sbjct: 194 WSKDNSLRIQEAAKLAQLTRQWQDAGIPVVLGGDFNDTPRTAVATPFYEPANGHGTGTFV 253

Query: 225 -WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                D +  L     +  +RC + +   N   +DY      ++                
Sbjct: 254 EADETDQDHFLADDCSDGRTRCRSGEPTFNNSKLDYLFFSAGSFTGAKA----------- 302

Query: 284 DIKSRGKRLSDHC 296
           D+      +SDH 
Sbjct: 303 DVLPLDTAVSDHR 315


>gi|153208660|ref|ZP_01946912.1| exodeoxyribonuclease III [Coxiella burnetii 'MSU Goat Q177']
 gi|165919791|ref|ZP_02219534.1| exodeoxyribonuclease III [Coxiella burnetii RSA 334]
 gi|212218132|ref|YP_002304919.1| exodeoxyribonuclease III [Coxiella burnetii CbuK_Q154]
 gi|120575846|gb|EAX32470.1| exodeoxyribonuclease III [Coxiella burnetii 'MSU Goat Q177']
 gi|165916874|gb|EDR35478.1| exodeoxyribonuclease III [Coxiella burnetii RSA 334]
 gi|212012394|gb|ACJ19774.1| exodeoxyribonuclease III [Coxiella burnetii CbuK_Q154]
          Length = 259

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 83/307 (27%), Gaps = 80/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +R+++ N+N +        +                + K   ADIV LQE  +   +   
Sbjct: 1   MRIITLNLNGIRAAARRGFF---------------DWLKRQKADIVCLQETKACLEITNG 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    +  +Y       +S           I  R+K  RV  +           +   
Sbjct: 46  DQFHPKGYHCYYHDAEKSGYSG--------VGIYCREKPDRVTTR------LGWEHADKE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      ++ +   + V  +++ S    +  +        +           +     S
Sbjct: 92  GRY-----IQADFGSLSVASLYMPSGTTGEHRQ-------KIKFDFMDHYMKRLKNIVHS 139

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              F+I GD+N                             +       +  F        
Sbjct: 140 KRSFIICGDWNIVHKEIDIKNFKSNQKHSGCLPEERAWLDEVFTKVGLVDAFRVVNQKP- 198

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +      ++           IDY V+  +    +  E              + KR SDH 
Sbjct: 199 DQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSERI-----------YKDKRFSDHA 247

Query: 297 PISIDYD 303
           P+ IDY+
Sbjct: 248 PLIIDYE 254


>gi|84997700|ref|XP_953571.1| sphingomyelinase, [Theileria annulata]
 gi|65304568|emb|CAI72893.1| sphingomyelinase,, putative [Theileria annulata]
          Length = 574

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 78/238 (32%), Gaps = 21/238 (8%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++S+N+  +     +    N   R+      L +       D++ LQE    N       
Sbjct: 209 IMSYNVQCIPW--YLVPGYNIGIRSRILPKYLVEIVNKYSIDVLILQECFDKNIFNSFKN 266

Query: 86  KNTWCIFYSTERLINHSKRDSNND--------IHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                + +ST  +   ++ DS  +        I+  + +  +   + +        +++ 
Sbjct: 267 SLYHLLPFSTNLIGCKNEWDSTMNNSNRWLILINGGVCILSRYPIINRHQLIFKNCRNTC 326

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           S A ++ A   ++    K+I ++  HL+++            S  +  QQ   +  W+  
Sbjct: 327 SLA-SKGACLAVINKGNKRINIIGTHLQAYDGP---------SKFIRQQQFNEIIQWLMT 376

Query: 198 -KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                  P+++AGD N       +  +   + +           K      +      
Sbjct: 377 LDVNINDPYILAGDLNTCCLTDTSEFNTMLSNENFIKFTHTFDFKKDPTYCSITNDYC 434


>gi|30047751|gb|AAH50504.1| Cnot6 protein [Danio rerio]
          Length = 566

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/352 (11%), Positives = 95/352 (26%), Gaps = 72/352 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   +  ADI+ LQE+ +     
Sbjct: 197 FSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKSIMQEILSCSADIISLQEVETEQYYN 256

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S +D       A+  +     ++Q+           
Sbjct: 257 YFLLELKEQGYEGFFSPKSRARTMSESDRKHVDGCAVFYKTDKFSLVQKHTVEFNQLAMA 316

Query: 138 SRAGNRRAVELLVEIN-------------------GKKIW-----VLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                   GK +      +L +      +    
Sbjct: 317 NSEGSEAMLNRVMAKDNIGVAVLLELRKEMMELSAGKPLHGMEKQLLLVANAHMHWDPEY 376

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQK--------KESLVPFVIAGDFNRKINY-------- 217
            +       +   + + + D  T+         + + +P V+  D N   +         
Sbjct: 377 SDVKLVQTMMFLSEVKNIVDKATRSLKLSSVSGETNAIPLVLCADLNSLPDSGVVEYLST 436

Query: 218 ---LGNNDDF--WKTIDPNDSLIRFPKEKDSRC------------------NANKNLRNK 254
               G + DF   + ID   +     K   S                      N     K
Sbjct: 437 GGVDGAHKDFKELRYIDSLTNFNCNGKNGTSSTRITHGFKLKSAYENGLMPYTNYTFDFK 496

Query: 255 IPIDYFVMDQNAYKFL-IQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
             IDY    Q     L +          E+++         SDH  +    +
Sbjct: 497 GIIDYIFYSQPLLNVLGVLGPLEHHWLLENNVTGCPHPHIPSDHFSLFAQLE 548


>gi|269218137|ref|ZP_06161991.1| endonuclease/exonuclease/phosphatase [Actinomyces sp. oral taxon
           848 str. F0332]
 gi|269212265|gb|EEZ78605.1| endonuclease/exonuclease/phosphatase [Actinomyces sp. oral taxon
           848 str. F0332]
          Length = 261

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 84/295 (28%), Gaps = 49/295 (16%)

Query: 24  VRLVSWNINTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77
           +RLVS+N+ +    +              +           L  D++ LQE+        
Sbjct: 1   MRLVSFNVQSGRANQSWGGAVLGDDAMNDAAVREAAAEIAQLKPDVLALQEVREDRGRSI 60

Query: 78  -NAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            +A A+                 N   R    +     IA          ++  L   ++
Sbjct: 61  LSAFAESAGMEHRRFAACRRAPSNFIARMFRRSRRGYGIAFATTYPIDYIRALRLPSWRN 120

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              RA +RR       +  +++ ++ + L     +    +  +        Q + L+D++
Sbjct: 121 PMRRASDRRLGW-RFRLEEQRMAIVAVLLTPKPVVVGATHLTTKQPDNRK-QLRRLEDFM 178

Query: 196 TQKKE----SLVPFVIAGDFNRKINY---LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            +          P ++ GD N  +         +   + +                    
Sbjct: 179 ARVARRRGIPDAPRIVLGDLNTHLEDIQKQTEYEVLAQAL------------------TY 220

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +      ID+ +                      +  +R   +SDH  +++D D
Sbjct: 221 PDDEPSSQIDHIL--------------GVGFRAAGEATTRRLAVSDHRMLAVDVD 261


>gi|320170151|gb|EFW47050.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 684

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 68/226 (30%), Gaps = 28/226 (12%)

Query: 16  CTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVKR-TTSDYTLLRQYAKNLDADIVFL 71
            ++    K +++S+NI           +  W  S  R  +     L      L  DI+ L
Sbjct: 249 ASSHAHNKFKVMSYNILANQHFRNNSYLYRWTPSAARAWSYRRANLVAEITALQPDILCL 308

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ SY+ + +      +    S           ++     AI V+     + +      
Sbjct: 309 QELDSYHDLPETLRHLGY----SGRYFKKTGGEATDA---CAIFVKSDRFAINRVHNVQN 361

Query: 132 GAKDSFSRAGNRRAVELLVE------INGKKIWVLDIHLKSFCFLDSLE----------N 175
             + S     +   +  +V          +K+ V   HL        ++           
Sbjct: 362 FIEGSRVLTSHNIGMLAVVTMQLPTAPWIRKMIVATTHLHFNPKRGEIKLLQLMKLFAEI 421

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
               +      QA +    I       +P V+AGDFN   +     
Sbjct: 422 RRVRAELTAQLQASYQSRRIHHPVSP-IPVVLAGDFNLTPDSDLYR 466


>gi|116198337|ref|XP_001224980.1| hypothetical protein CHGG_07324 [Chaetomium globosum CBS 148.51]
 gi|88178603|gb|EAQ86071.1| hypothetical protein CHGG_07324 [Chaetomium globosum CBS 148.51]
          Length = 261

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 55/252 (21%), Gaps = 30/252 (11%)

Query: 65  DADIVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           D+  V LQE+              +W            +   S+           ++   
Sbjct: 20  DSPFVCLQEVLHSQLTDIQARLGPSWGRIGQGREDGKEAGEYSSIFFRADHWECDRSRTY 79

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                P + +K  +  A  R               V+ +                     
Sbjct: 80  WLSPTPEVSSK-GWDAAFERVVTIGSFRHKRTGAVVVVMSTHF----------DHEGEVA 128

Query: 184 LSQQAQWLKDWITQKKESLV-----PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
             Q A  L                 P    GDFN               I   D     P
Sbjct: 129 REQSAHLLLKLARTWCGEGAFDLSAPVFFGGDFNSTPTGRAYKVLTEPGIGMKDIFNILP 188

Query: 239 KEKDSR----CNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
            +           +           ID+  +        +  S     ++E      G  
Sbjct: 189 ADAKYGNEEITFTSFGDDPNQHPARIDFLFVRDLGSLRFLSFSILPNRFDE------GVY 242

Query: 292 LSDHCPISIDYD 303
           LSDH P+  D +
Sbjct: 243 LSDHRPVVADVE 254


>gi|302559570|ref|ZP_07311912.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
 gi|302477188|gb|EFL40281.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
          Length = 333

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 72/289 (24%), Gaps = 66/289 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P    VA+ +R+++ N+      +                  L    +  + D+VF+QE 
Sbjct: 106 PAGPPVAE-LRVLTSNVQFGRAAD-----------------ALVDVVRREEPDLVFVQEC 147

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                            +  +                           V+   +PL G  
Sbjct: 148 EYTCDATLKRELTDAYPYRQSVEGGGSEG------------------SVILSRFPLRGTA 189

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                 G   AV    +++G  + +   H                   +   Q +  +  
Sbjct: 190 GVPGTMGMPGAVA---DVDGHTVRLQLAHPMPPLP-----------EQVRLWQRELGRLR 235

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                +   P V+AGDFN   ++          +     L    +           L   
Sbjct: 236 DAAAADRGTPTVLAGDFNATQDHAAFRRILDTGLRDAARLAGADRTPTWPSRTLPTLG-- 293

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ID+ ++ ++            +   +           DH  +  D  
Sbjct: 294 AQIDHVLVSEHFA----AHRTHVLPLPDT----------DHRALLTDLT 328


>gi|145529087|ref|XP_001450332.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417943|emb|CAK82935.1| unnamed protein product [Paramecium tetraurelia]
          Length = 348

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 87/309 (28%), Gaps = 70/309 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                V++ SWNIN                R  + +    QY  +   DI+ L E+    
Sbjct: 82  FSTPTVKISSWNING--------------IRAVTKHESAVQYLNDSKFDIICLNEL---K 124

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A   VF K      +     + +     +   ++ +A+  K   +  +    +   D   
Sbjct: 125 ADQDVFDKENLGAKFGKHYFL-YLNFCKSKAGYSGVAIASKVKPLSVKCDIGVDKHDQEG 183

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           R          +    ++ +++  ++ +    L+ L+              + L+     
Sbjct: 184 R---------TLTAEFEQFYLVSCYVPNSGQKLERLDYRTKEWDIDFQNYLEGLRK---- 230

Query: 198 KKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEK 241
                 P ++ GD N   + +                   D F   +             
Sbjct: 231 ----KKPTILCGDLNVAHHEIDLSNPAGNKKTAGFTLQERDQFSNYLQKGWVDSFRHLHP 286

Query: 242 DSRCNANK-------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                +         +      +DYF++++ A   +     +  +             SD
Sbjct: 287 KEVKYSFFSARSNSRSQNKGWRLDYFIINKEASDAITVSDINLTV-----------EGSD 335

Query: 295 HCPISIDYD 303
           H PI  + D
Sbjct: 336 HVPIECEVD 344


>gi|242034473|ref|XP_002464631.1| hypothetical protein SORBIDRAFT_01g022180 [Sorghum bicolor]
 gi|241918485|gb|EER91629.1| hypothetical protein SORBIDRAFT_01g022180 [Sorghum bicolor]
          Length = 553

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 75/246 (30%), Gaps = 22/246 (8%)

Query: 16  CTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
              S      ++S+NI  +  +  +  S         T     L +      ADI+ LQE
Sbjct: 247 SQTSSLGTFTVLSYNILADAYATSDAYSYCPTWALTWTYRRQNLLREIIGYHADIICLQE 306

Query: 74  MGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +      +  +    K+ +   Y       +S      D       R K   V +     
Sbjct: 307 VQVNHFEDFFSPELDKHGYQALYKKRTTEVYSGNPMAIDGCATFFRRDKFSHVKKYEVEF 366

Query: 131 LGAKDSFSR-----AGNRRAVELLVEINGKKIWVLDIHLKS-----------FCFLDSLE 174
             A  S +      A  R A+  L++ N   I VL+    +            C  ++  
Sbjct: 367 NKAAQSLTDAIIPAAQKRVALSRLIKDNIALIAVLEAKFGNHGAENPGKRQLLCVANTHI 426

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           N +     +   +   L   + +    + +P ++ GDFN       +       +D +  
Sbjct: 427 NVHQDLKDVKLWEVHTLLKGLEKIAVSADIPMLVCGDFNSTPGSSPHALLAMGKVDQHHP 486

Query: 234 LIRFPK 239
            +    
Sbjct: 487 DLAIDP 492


>gi|149007639|ref|ZP_01831256.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|307127690|ref|YP_003879721.1| metal-dependent hydrolase [Streptococcus pneumoniae 670-6B]
 gi|147760794|gb|EDK67765.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|306484752|gb|ADM91621.1| metal-dependent hydrolase [Streptococcus pneumoniae 670-6B]
 gi|332077175|gb|EGI87637.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA17545]
          Length = 271

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 78/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +D  D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLDLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAMLNW 270


>gi|83816510|ref|YP_444587.1| dioxygenase, putative [Salinibacter ruber DSM 13855]
 gi|83757904|gb|ABC46017.1| dioxygenase, putative [Salinibacter ruber DSM 13855]
          Length = 261

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 64/292 (21%), Gaps = 51/292 (17%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N+              +  R       L +  +     ++ +QE       A     
Sbjct: 1   MTFNL------------SPAFARGPDRERTLAELVQREAPAVLSVQETWMKTRSASDGGG 48

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                        +                R    +V   S  +     S       R  
Sbjct: 49  LFVSWPLRVLLEDSVGYALPRARPPETTIYRPVLGQVRLDSMRVHPLPPSGGSDPRSRYT 108

Query: 147 ELLVEINGKKIWVLDIHLK--------------SFCFLDSLENTYSPSCSLLSQQAQWLK 192
                  G+   + ++HL               S     +   TY       + QA+ + 
Sbjct: 109 RTFFTWQGRPAVLYNVHLHTVGTRPWDLPGTAASLARWRTFLRTYRAGALHRADQARRIH 168

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             I Q      P ++ GDFN   +                           +        
Sbjct: 169 RHIEQ---ETRPVLVTGDFNSTPHQWAYRHLLQGLRAAGGGATFPAGWPLVQ-------- 217

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               ID+ ++               +             +SDH P+     +
Sbjct: 218 ----IDHVLVGPE----------WRVGSATVPGLEATDFVSDHRPVVARVRW 255


>gi|254251164|ref|ZP_04944482.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
 gi|124893773|gb|EAY67653.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
          Length = 271

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 82/310 (26%), Gaps = 68/310 (21%)

Query: 12  FLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +P     A   ++  VSWN++      G + W             +R + ++  AD+ 
Sbjct: 6   LSLPFAEPQAAPDEITAVSWNLHKGRSPLGFTAWN-----------AMRNWMQSTHADVY 54

Query: 70  FLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           FLQE  +                 +A   V+      I  + +  I              
Sbjct: 55  FLQEAMARRMPRPVLAPGFGAPMDDAYDDVWHCQATEIARALDWQIALGPNVFKPSWRHG 114

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+   +   L   + +        R   R  +     + G + + +L  HL        
Sbjct: 115 NAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGARPVTLLCAHLALT----- 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                    +   +Q  W+  WI +      P V+AGDFN   N        +  I  ++
Sbjct: 165 --------RAARLRQMNWIAHWIERNASDG-PLVLAGDFNDWRNDSV---ALFAEIGLSE 212

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                                 + +D   +                             L
Sbjct: 213 VATLL----GESGRTFPAFSPALALDKMFVRG------------LTPLEWQAPSGETAWL 256

Query: 293 SDHCPISIDY 302
           SDH P     
Sbjct: 257 SDHLPYIARL 266


>gi|288919669|ref|ZP_06413997.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
 gi|288348958|gb|EFC83207.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
          Length = 368

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 89/336 (26%), Gaps = 56/336 (16%)

Query: 14  VPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVK---------------RTTSD 53
           +P  A++A       +R+++ N    S+ + +   K   +                  + 
Sbjct: 33  LPNAAALADGPGRANIRVMTQNTYVGSDYQAIVDAKTPAEFVAAVTLTYQQILASDPKAR 92

Query: 54  YTLLRQYAKNLDADIVFLQE-------------MGSYNAVAKVFPKNTWCIFYSTERLIN 100
              + +       D+V LQE             + S    A +         Y    ++ 
Sbjct: 93  AAAVAREIVRNQPDLVALQEADIVRTGAAPATNVQSDQLKALLAALRAQGQPYQPVAIVP 152

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQ----QSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
               +  + +   + +  +NV + +    +   L     + ++        +        
Sbjct: 153 ELDAEYPSTLGFDVRISARNVILARVGRIRVSNLQSQTFAVNQVFQSAVGSITFRNGWTS 212

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           +  +               T+  +    + Q    +D +     + +P V AGDFN   N
Sbjct: 213 VDAVV-----GGRAFRFVTTHLEAAPPFTTQLAQAQDLVASAANTRLPVVFAGDFNTTAN 267

Query: 217 YL-GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNA 266
                    ++ +  +  +  + K+                         ID  +     
Sbjct: 268 DPQNPTFPTYQFLLNSGFVDAWTKKNPGNPGFTCCQAPDLRNPVSALIARIDLVLFRGGF 327

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      +   + D    G   SDH  I    
Sbjct: 328 DV----ADIHRVGDRQSDRTPSGLWPSDHAGIVATL 359


>gi|149003378|ref|ZP_01828267.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147758561|gb|EDK65559.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP14-BS69]
          Length = 271

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              N  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIETRE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|225454561|ref|XP_002267349.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1212

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/287 (10%), Positives = 73/287 (25%), Gaps = 65/287 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++WN+   ++               S   +++ Y +N   D++ +QE         +
Sbjct: 3   MKIITWNVRGANDS--------------SKRKIIKNYIRNQRVDLMCIQETKIQEMSEGI 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   F                     I +      +    +       S       
Sbjct: 49  VRSLGLGRFSDWRARNAEGAAG-------GILICWDKRVLEILDWEEGQFSLSC------ 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  NG       ++                +   L                   
Sbjct: 96  ---RFKITENGAIWVFTGVYGPFTKVEREGMWEELGAIRGLW----------------GD 136

Query: 204 PFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           P+ + GDFN  +     +           F + +D  + +    +  +   +   N +  
Sbjct: 137 PWCLGGDFNITLFQHERSSQRRISSAMRRFAQIVDDLELVDLPLQGGEFTWSGGLNNQAW 196

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +D F++  +              ++        +  SDH PI ++
Sbjct: 197 ARLDRFLVSPS----------WLDQFSGVTQGRLSRPTSDHFPIVLE 233


>gi|293190065|ref|ZP_06608642.1| endonuclease/exonuclease/phosphatase family protein [Actinomyces
           odontolyticus F0309]
 gi|292821124|gb|EFF80075.1| endonuclease/exonuclease/phosphatase family protein [Actinomyces
           odontolyticus F0309]
          Length = 466

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/379 (11%), Positives = 96/379 (25%), Gaps = 92/379 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +S    + + ++N  +L+      L  +      +  + + +  + ++ DI+ + E 
Sbjct: 34  PPRSSTTDVLTVATFN-ASLNRDAPGQLLDDLATADNAQASNVAETIQRVNPDIILINEF 92

Query: 75  G--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN------------------------ 108
              +  A   +F  N   I ++  R +++    S +                        
Sbjct: 93  DYDATAAAVDLFRTNYLEIPHNGSRPVSYPYSWSGSVNTGIPSGFDLDGDGSTSGPSDAW 152

Query: 109 -----DIHTAIAVRKKNVRVLQQ-----------------------SYPLLGAKDSFSRA 140
                       V  K     +Q                       +             
Sbjct: 153 GFGKFPGQYGFVVYSKYPIKDEQVRTFQHFLWKDMPGALLPTNSDGTGWYSDEVLDSFPL 212

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            ++   +L V+++G  I VL  H     F  + +     +   +   A ++ +      +
Sbjct: 213 SSKTHADLPVDVDGTTIHVLAAHTTPPSFDGAEQRNKKRNFDEIRLWADYVSNRADYLYD 272

Query: 201 S---------LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--------------- 236
                        FVI GD+N       +       +  N  +                 
Sbjct: 273 DNGVRGGLSADANFVILGDYNSDPLDGDSYPGAIDQLLTNSRVADTAPTSLGGQREAELQ 332

Query: 237 ----FPKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                    + + +              IDY +   N    +           ++  +  
Sbjct: 333 GGANLTHRTEPKYDTGDFNDTPRPGNLRIDYVL--PNTGTQVEDAGVFWPTREDEAFRLT 390

Query: 289 GKRL---SDHCPISIDYDF 304
           G      SDH  +     F
Sbjct: 391 GLYPFPTSDHRLVWSKLRF 409


>gi|125718607|ref|YP_001035740.1| hypothetical protein SSA_1808 [Streptococcus sanguinis SK36]
 gi|125498524|gb|ABN45190.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
          Length = 271

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 65/277 (23%), Gaps = 54/277 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS---------------- 94
            +    L +       D++ LQE+       +V     +                     
Sbjct: 18  ETKLNQLAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEK 77

Query: 95  ------TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  +  +A+  +     ++   L+   +       R+ +  
Sbjct: 78  LADAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREV--LVSEVNDPRDYHTRKVLLA 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             E+ G+ + +   HL  +      E                      +  ++    V+ 
Sbjct: 136 ETEVEGQLLTIASCHLSWWDKGFQGEWAKLE----------------EKLLKAESSLVLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK---NLRNKIP--IDYFVMD 263
           GDFN  +   G        +   DS     +                NK    IDY    
Sbjct: 180 GDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGIIAGWDDNKHALKIDYVFTS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Q          F                +SDH  + +
Sbjct: 240 QGMDVERSAVVFDGKETPV---------VSDHFGLEV 267


>gi|332141194|ref|YP_004426932.1| predicted extracellular nuclease [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551216|gb|AEA97934.1| predicted extracellular nuclease [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 863

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/361 (11%), Positives = 98/361 (27%), Gaps = 78/361 (21%)

Query: 20  VAQKVRLVSWNINTLS-----EQEGVSLWKNSVKRTTSDYT------LLRQYAKNLDADI 68
               + + ++N+         E   V+   ++ +  + D         + +   NL+AD+
Sbjct: 459 AEGNLSIATFNVLNYFNGEVDENGDVTFDYDNNRGASDDVAFALQQGRIVEAIINLNADV 518

Query: 69  VFLQEMGS-----YNAVAKVFPKNTWCIFYSTER---LINHSKRDSNNDIHTAIAVRKKN 120
           V L E+ +      +A+  +       +  + +      +       + I   +  +   
Sbjct: 519 VGLMEIENDGFGDDSAIQSLVNAINAELGETEQYAFVATSDGSEIGTDAITVGLLYKASV 578

Query: 121 VRVLQQSYPLLGA-----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           V     +  +        +DS +R         +   + K   V   H KS     + + 
Sbjct: 579 VTPESDAMIVDMPVQQIDEDSLARMRPSLLQSFVHNESSKSFLVAVNHFKSKGSQCAEDV 638

Query: 176 TYSPSC---------SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------- 219
             +PS          +L    A  L + ++ +       ++ GD N              
Sbjct: 639 AEAPSEITTIQGSCNALRVSAAITLGNALSDESLPERKVIL-GDLNAYSAEDPVAVLTDY 697

Query: 220 ----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFV 261
                            ++     ++ +       +E D+   +      +    +D+ +
Sbjct: 698 TPESRGYTIATAINTGMDEGASVDVESSFGYHNLAEEFDAEGFSYWFYGTEQVGSLDHVL 757

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRG-------------------KRLSDHCPISIDY 302
                    I  +   I   E                           R SDH P    +
Sbjct: 758 ASDAMLADAIDGAHWNINSVEAYQLQYDQALRFYPEEEGYAFTDVGPFRSSDHDPFIATF 817

Query: 303 D 303
           D
Sbjct: 818 D 818


>gi|327265432|ref|XP_003217512.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Anolis
           carolinensis]
          Length = 557

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/351 (10%), Positives = 92/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q     +ADI+ LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEIMTWNADIISLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLAELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFSLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEINGKKIWV------------------------LDIHLKSFCFLDSL 173
           +  G+   +  ++  +   + V                        + +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEISSVKSHPTMDKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV-------PFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  ++         P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRTLKAGTSGEHAAIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            IDY    +   N    L       ++ N           SDH  +    +
Sbjct: 489 IIDYIFYSKPQLNIIGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLE 539


>gi|303282777|ref|XP_003060680.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458151|gb|EEH55449.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 323

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/334 (8%), Positives = 74/334 (22%), Gaps = 74/334 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKR-----TTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++S+N+   S             R            + +  K L  D++ +QE   ++ V
Sbjct: 1   VMSYNLLADSHVWKHRAELYRGTRDDLLAWAPRLRGIAREVKLLRPDVLGVQECEDFDGV 60

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           ++    + +   ++                   +         +               A
Sbjct: 61  SRALASDGYEGLHAPRSGEKLDGSS--------VFYDSTKFECVGFEAIDFSTSGLMHNA 112

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               A    +  +G  I V  +HL    F     +       +   + +  +  + +  +
Sbjct: 113 AA-IARLRPIRGDGPPIVVGCVHL---LFNPQRGDKKLGQLRVFIDRVEANRAAMAETSD 168

Query: 201 SLVPFVIAGDFNRKINYLGNN--------------------------------------- 221
                ++ GDFN +                                              
Sbjct: 169 RTPRAMLLGDFNAEPGSDLYRFVSRGVLDVTRVNRREMSGVLDAGARAYDDVGMDRHDAR 228

Query: 222 --DDFWKTIDPNDS------------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
              D    ++ N                            + + +    +DY  +    +
Sbjct: 229 QVRDMMTALEGNRGRVAHSMRGKLVSAYASVNGGTEPRATSCHGKFTGTVDYVFLGDGVH 288

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +                  +  SDH  +  D
Sbjct: 289 ARRVLMP----PSAPTRGIPNEEYPSDHFSVVAD 318


>gi|326918484|ref|XP_003205518.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Meleagris
           gallopavo]
          Length = 549

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/344 (12%), Positives = 87/344 (25%), Gaps = 68/344 (19%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 181 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 240

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 241 YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFSLVQKHTVEFNQV 300

Query: 127 SYPLLGAKDSF-------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +       ++           G    +E+  E+ G  I  L +  +     ++  +    
Sbjct: 301 AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASIKSLHVDKQLLIVANAHMHWDPE 360

Query: 180 SCSLLSQQ----AQWLKDWITQKK---------ESLVPFVIAGDFNRKINY--------- 217
              +   Q       LK+ + +            + +P V+  D N   +          
Sbjct: 361 YSDVKLIQTMMFVSELKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNG 420

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKI 255
               N+ DF +       +      K+                         N     K 
Sbjct: 421 IVADNHKDFKELRYNECLMNFSGSGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFKG 480

Query: 256 PIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            IDY        N    L       ++ N           SDH 
Sbjct: 481 VIDYIFYSNTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 524


>gi|312194645|ref|YP_004014706.1| endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
 gi|311225981|gb|ADP78836.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
          Length = 258

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 72/311 (23%), Gaps = 86/311 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL ++N+         ++          D   LR    +LD D++ LQE+      +  
Sbjct: 1   MRLGTFNLMHGRSMTDATV----------DPARLRSAVASLDCDVLALQEVDVDQPRSGG 50

Query: 84  FPKNTWCIFYSTERLINHSKRDS-----------------NNDIHTAIAVRKKNVRVLQQ 126
                                 +                 + +    +A+  +   +  +
Sbjct: 51  ADLCALAAEALGVEPGGRRFAATVYGTPGESWRPAAGPRRDGEGAYGVALVSRLPVLGWR 110

Query: 127 SY---------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
                            P    +        R A+   +      + V   HL      +
Sbjct: 111 VVELGRAPVRAPVAVPGPDGRPRLILLDDEPRAAIIAELATPAGPLTVAATHLSFVPGWN 170

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                           A+ L+  +        P VI GD N             + +   
Sbjct: 171 ----------------ARQLRRLVRVLGRHGSPAVILGDLNLPGPLP-------RALTGW 207

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L   P               +I  D+ +        ++                    
Sbjct: 208 RRLAAAP--------TYPAHAPRIQFDHVLAHGPVPP-VVAAGVRHTP------------ 246

Query: 292 LSDHCPISIDY 302
           +SDH  + +D 
Sbjct: 247 VSDHRALLVDL 257


>gi|290956453|ref|YP_003487635.1| hypothetical protein SCAB_19491 [Streptomyces scabiei 87.22]
 gi|260645979|emb|CBG69070.1| putative PROBABLE EXPORTED PROTEIN [Streptomyces scabiei 87.22]
          Length = 448

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/292 (11%), Positives = 80/292 (27%), Gaps = 44/292 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             ++++N+  L E         +    +               DIV +QE  +Y+A    
Sbjct: 43  FNVLTYNVAGLPEGLSSGKPATNTPLISPRLGA---------YDIVNVQEDFNYHAALYA 93

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +    S                   +           +         +       
Sbjct: 94  GDNHPYRTATSG-----------GVPFGDGLNTLSDYAFDDFERVKWNTCTGTNCLTPKG 142

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            ++  +   +G  + + ++H  +     +L    +            L D+I     +  
Sbjct: 143 FSLARVRLDDGVYVDLYNVHTNADDDAAALAARRAN--------ITQLSDFIKAN-SAGN 193

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----------CNANKNLR 252
             ++ GD N +    G  D+    +  N     + +                C       
Sbjct: 194 AVIVMGDTNTRYTRTG--DNIRSIVGDNGLTDPWVQLVKGGVAPALGAEPLVCPKTAPAN 251

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +   +D  +   +    L    ++        + S G  LSDH P ++D+ +
Sbjct: 252 DCEVVDKVLYRDSNVVDLTANRYNNEWAK--FLDSAGGNLSDHFPHTVDFSW 301


>gi|294901077|ref|XP_002777223.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
 gi|239884754|gb|EER09039.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
          Length = 2861

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 84/315 (26%), Gaps = 66/315 (20%)

Query: 27   VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL------QEMGSYNAV 80
            +SWNIN L              ++ ++ + L +  +N    I+ L      QE       
Sbjct: 836  LSWNINGLRGF----------LKSEANVSCLNRLVRNELPAIMVLTETKLTQEKKDRAFT 885

Query: 81   AKVFPKNTWCIFYSTERLINHSK--------RDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              +         +S E               R  +      + +  + +  +   +    
Sbjct: 886  KLLDSLPVRYDVFSAESAGRKGYAGVAVLLKRAVDVGYDDGLCLIHEPITGIPSRFFDGE 945

Query: 133  AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              +       R     ++ I  ++  ++ +++ +           S       +  +WL+
Sbjct: 946  QDEEEDTTSGR-----VLTIELRQCTLVAVYVPNSGGDLRFLEYRSKWDVAFRRYMKWLR 1000

Query: 193  DWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------------FWKTIDPND 232
                       P +IAGD N   + L   D                       + +   D
Sbjct: 1001 SR-----AGEKPLIIAGDLNACGSDLDIGDTRREAPHSPSIQPCEVEAFERLQREVSLCD 1055

Query: 233  SLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +      E     +   N           IDY ++       ++  +     +       
Sbjct: 1056 TFRIVHPEVAGVYSFYCNAYEKKLNFGRRIDYILVSSEQSDCVVDSTVFYAEFGLGYRP- 1114

Query: 288  RGKRLSDHCPISIDY 302
                  DHCPI  + 
Sbjct: 1115 ------DHCPILAEL 1123


>gi|226305494|ref|YP_002765454.1| exodeoxyribonuclease [Rhodococcus erythropolis PR4]
 gi|226184611|dbj|BAH32715.1| putative exodeoxyribonuclease [Rhodococcus erythropolis PR4]
          Length = 278

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 77/279 (27%), Gaps = 55/279 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           +    +  + +   AD + LQE           + P      F  +           +  
Sbjct: 26  AARKGMLDWLEKTSADFICLQETRASDDQLRETLEPALGNGWFLVSAE--------PSAK 77

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +AV  +      +    +G  D       R      +E +   + V  ++L S   
Sbjct: 78  GRNGVAVLSRTEPDAVR----IGHGDDEFLDAGRY-----IEADFADLTVASLYLPSG-- 126

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------ 223
            ++L          ++  A  L       + +    V++GD+N     L   +       
Sbjct: 127 -EALTPKQEEKERFMASFAVHLATTAAAAEAADRHVVVSGDWNIAHTELDLKNWKTNKKS 185

Query: 224 --------FWKTI---DPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMD 263
                    W  +   + +  +  F                +           IDY V  
Sbjct: 186 SGFLSEERAWMDLLFAEDSAWVDVFRTLHPGVDGPYSWWSYRGKAFDNDSGWRIDYQVAT 245

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   +          +   +  +S   R SDH P+++ Y
Sbjct: 246 RGYAERAK-------VALVERAESYDLRWSDHAPVTVSY 277


>gi|171676121|ref|XP_001903014.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936126|emb|CAP60786.1| unnamed protein product [Podospora anserina S mat+]
          Length = 645

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 70/318 (22%), Gaps = 72/318 (22%)

Query: 44  KNSVKRTTSDYTL-LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLI 99
                R +      +R     L+ADIV +QE  +   +    +     W +++S  +   
Sbjct: 15  PACGDRLSDQLQKSIRAMFDTLEADIVVVQEAKIQRKDLQDDMVLIPGWDVYFSLPKHKK 74

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG------AKDSFSRAGNRRAV------E 147
            +S             +R +         P          +D       R         E
Sbjct: 75  GYSGVAIYTRSSKCAPIRAEEGITGILCPPNSSTTFRDLPEDQQIGGYPRPGQLSGEVDE 134

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
             ++  G+ + +L+        + S                + +   +          V+
Sbjct: 135 ATLDSEGRCV-ILEFPAFVLVGVYSPATRDESRDEFRHAFTEAMDVRVRNLVAMGKEVVL 193

Query: 208 AGDFN----------------------RKINYLGNNDDFWKTIDPND------------- 232
            GD N                             +     + +                 
Sbjct: 194 TGDLNIIRSELDTAGLVEQLRKEEVSLDDFFSSPSRRFLNQIVFGGRVVGTRDEGREEAV 253

Query: 233 SLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                 +   +R                     IDY +       + I  +         
Sbjct: 254 LWDLCREFHPTRTGMYTCWDTRKNCRPGNFGSRIDYVLCSSGIKDWFIDANIQ------- 306

Query: 284 DIKSRGKRLSDHCPISID 301
                G   SDHCP+   
Sbjct: 307 ----EGLLGSDHCPVYAT 320


>gi|193216274|ref|YP_001997473.1| endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium
           ATCC 35110]
 gi|193089751|gb|ACF15026.1| Endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium
           ATCC 35110]
          Length = 290

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 86/312 (27%), Gaps = 61/312 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----------LRQYAK--NLDADIV 69
           + +R ++ N +     +   L   S         L          +  +      + D+V
Sbjct: 5   KTIRCLTINTHRGRGPKLPYLLAQSPMDEAERIALLHEMRVYTFYIADWLHKHRHEYDVV 64

Query: 70  FLQEMGS------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            LQE+ +           K   ++ + +       I+H    +       +  +   ++V
Sbjct: 65  GLQEVFNGILGLGDKLFRKFRQRDHYRLIGGFRSTISHGVGFAGFRYENLMLSQ---LQV 121

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L             +              N + +W+ + HL  +   D            
Sbjct: 122 LAHRQINYLLPGKIAFLAASGFTLAPFVFNDEVVWIGNTHLHPYNPSD------------ 169

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------------NYLGNNDDFWKTIDP 230
            ++Q + + + + +   +  P +  GD N                +     +D    I  
Sbjct: 170 RARQVRSIAEEVRKL--NGAPVLFMGDLNTVPPGCRVNGFPAGARDEFSYKNDKTFEIFS 227

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              L   P                  +DY +   +         +  + Y+      +  
Sbjct: 228 EVGLSMVPHADADEFYTYPTGLPNRTLDYVLFSDH---------WEVVNYHV----VKEF 274

Query: 291 RLSDHCPISIDY 302
           + SDH P+  ++
Sbjct: 275 KFSDHYPVFGEF 286


>gi|119493288|ref|XP_001263834.1| DNA lyase, putative [Neosartorya fischeri NRRL 181]
 gi|119411994|gb|EAW21937.1| DNA lyase, putative [Neosartorya fischeri NRRL 181]
          Length = 622

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/315 (10%), Positives = 66/315 (20%), Gaps = 73/315 (23%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSK 103
             R    +  +    +   ADIV  QE  +   +    +     W  ++S  +    +S 
Sbjct: 13  PWRGNRTFESMFDILE---ADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPKTKKGYSG 69

Query: 104 RDSNNDIHTAIAVR----------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
                   T   +R            N  V  +  P       +        +E+     
Sbjct: 70  VVIYTRNATCCPIRAEEGLAGVLCPPNSSVSFRDLPEEQQVGGYPTIEQLSELEVDAATL 129

Query: 154 GKKIWVLDIHLKSFC--FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
             +   + +   +F    + S  N      +        +   I           + GD 
Sbjct: 130 DSEGRCVILEFPAFVLLGIYSPANRDESRDNFRHSFIDLMDARIRNLVAMGKRVFVTGDL 189

Query: 212 NRKIN----------------------YLGNNDDFWKTIDPND-------------SLIR 236
           N                           +     F + +                     
Sbjct: 190 NIAKGEIDAAHATEAIRKGTVTEDEFISVPARRVFNQLLSDGRVIGQRDEGREIPVLFDI 249

Query: 237 FPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                  R                     IDY +   +   +    +             
Sbjct: 250 CRSFHPGRRGMYTCWEQRIIARPGNYGSRIDYVLCSLDMQDWFSDSNIQ----------- 298

Query: 288 RGKRLSDHCPISIDY 302
            G   SDHCP+   +
Sbjct: 299 EGLMGSDHCPVYAVF 313


>gi|302840074|ref|XP_002951593.1| hypothetical protein VOLCADRAFT_92068 [Volvox carteri f.
           nagariensis]
 gi|300263202|gb|EFJ47404.1| hypothetical protein VOLCADRAFT_92068 [Volvox carteri f.
           nagariensis]
          Length = 392

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/311 (9%), Positives = 62/311 (19%), Gaps = 64/311 (20%)

Query: 18  ASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           +S   ++ L+ +NI   +  + +    +    +      +  L++  ++  +D++ LQE+
Sbjct: 43  SSEPDEISLIVYNILADHYCTPKRYPYVRPEWLH-WPHRWEALQEQIRSFGSDLICLQEV 101

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   +                                               L   
Sbjct: 102 EPSRWNQMLASPALTDYAG------------------------------------FLQLG 125

Query: 135 DSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             +  +  R  +          +  +L +            N          Q+ +    
Sbjct: 126 LVWHESRTRALLAAFTFWDGLGQQQLLYVANMHLEGSPYRPNDRISQTRSALQRLEA-HQ 184

Query: 194 WITQKKESLVPFVIAGDFNR--------------------KINYLGNNDDFWKTIDPNDS 233
                       V+ GDFN                     + +             P   
Sbjct: 185 RQYGIAPEDAAVVVCGDFNSGRHETVCHFLHRGRLEGGTTEPHMPKVEVTKASISHPYAL 244

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA--YKFLIQESFSEILYNEDDIKSRGKR 291
              +           K       +D+                        E         
Sbjct: 245 HEAYSSGGHELPFTRKVPPLASTLDFIWASCQLEVAALYWPVECRHEGLIEHQALPNQHY 304

Query: 292 LSDHCPISIDY 302
            SDH PI    
Sbjct: 305 PSDHLPIGAVL 315


>gi|225858569|ref|YP_002740079.1| metal-dependent hydrolase [Streptococcus pneumoniae 70585]
 gi|225721773|gb|ACO17627.1| metal-dependent hydrolase [Streptococcus pneumoniae 70585]
          Length = 271

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              N  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|323126442|gb|ADX23739.1| hypothetical protein SDE12394_00955 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 274

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 78/280 (27%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF------------------- 92
                L ++      DI+ LQE+             ++                      
Sbjct: 19  KKLVDLAEHILAEKYDIICLQEINQLIESELAMELPSYQPIPGTPTIHKDHFALLLIHYL 78

Query: 93  ---YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+  K       S  L+ A D  +    RR++   
Sbjct: 79  KKRGQHYYWSWAYNHIGYDIYHEGVAILSKQPI--HVSDILVSAMDDETDYHTRRSLVAK 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            +++GK++ V+++HL  F                        +    +      P ++ G
Sbjct: 137 TKLDGKEVAVVNVHLSWFDKG----------------FLGEWEKLEKELLTLNCPLLLMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN   N  G        ++  DS                 +  ++ +    +D+    +
Sbjct: 181 DFNNPTNQEGYQVIMGSPLNLQDSHKVADHVFGDHSIVADIDGWEDNKEAFKVDHVFTSK 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +          S I +   D       +SDH  + +  D+
Sbjct: 241 DFDIK-----ASHITFEGGDAPV----VSDHYGLEVTLDW 271


>gi|320587729|gb|EFX00204.1| transcriptional effector [Grosmannia clavigera kw1407]
          Length = 693

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/360 (11%), Positives = 87/360 (24%), Gaps = 74/360 (20%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +   + +++ SWNI     +  +  S   +           +    +  +AD V LQE+
Sbjct: 320 VSPALEHIKVFSWNILGERYATPQVFSYTPSGALAWDYRKEKIMDEIRYRNADFVCLQEI 379

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSK----RDSNNDIHTAIAVRKKNVRVLQQSYPL 130
            +        P+     + S     + ++    +D+      AI  +     +L +    
Sbjct: 380 TTDALRETFGPELAQADYRSIHYPRSKARTMTEKDAATVDGCAIFYKGSKFVLLDKQLID 439

Query: 131 L-----------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKS-FCFLDSLE 174
                          D F+R   +  + ++        G ++ V+  HL       D   
Sbjct: 440 FQAIAINRPDMKTQHDIFNRVMPKDNIAIVGFFESRRTGARMIVVSAHLCWEGTLADVKI 499

Query: 175 NTYSPSCSLLSQQAQWLKDWI---------------------------TQKKESLVPFVI 207
              +     +++QA+    W                              +  + +P  +
Sbjct: 500 VQTALIMEFVTKQAEKYARWPALKDKKAIEIPGTAGADPVQVECAPSQEYRSNTDLPLFL 559

Query: 208 AGDFNRKINYLGN------------------------NDDFWKTIDPNDSLIRFPKEKDS 243
            GD+N   +                             D          +        D 
Sbjct: 560 CGDYNSTADSGVIELLREGRLPRDHHELGKYQYGNFTRDGIEHPFSLKSAYQHLASTPDE 619

Query: 244 RCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N        IDY            +                     +DH  I  D 
Sbjct: 620 LPFTNYTPGFANVIDYIWYTTNTLEVVEVLGRPDAEYLKRVPGFPNYHFPADHIQIMADI 679


>gi|301164489|emb|CBW24047.1| putative exported phosphatase [Bacteroides fragilis 638R]
          Length = 312

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/340 (9%), Positives = 88/340 (25%), Gaps = 74/340 (21%)

Query: 2   IRKYVLALVFFLVPCTA------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           + K++   V  +    A      +  ++++++SWN+      +                 
Sbjct: 1   MNKFIYIFVAIVAISFASCTQERAKEKELKVLSWNVWHAGHAKNYP---------EKGCE 51

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
                 +   AD++ + E  +Y A   V     +     ++                 + 
Sbjct: 52  GTIGILRKSQADVILMIE--TYGAAPMVADSLGYDYVLLSDN----------------LC 93

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  +        +P   +  +F          + ++++G  + + D  L     +  +  
Sbjct: 94  IYSRYPIKKTYLFPDSISTFNFGG--------VEIDMDGTPVRLFDTWLHYLPDMRLVPT 145

Query: 176 TYSP-------SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWK 226
             S               + + +   +          P ++ GDFN   +          
Sbjct: 146 EQSETDILAWDDAGTRDNEIRRILSVLQPMIRQTDSIPMIMGGDFNVHSHLDWTEATKDM 205

Query: 227 TIDPNDSLIRF--------------------PKEKDSRCNANKNLRNK---IPIDYFVMD 263
                  +                       P++         N         ID+    
Sbjct: 206 YHHGGAVVEWTVSKEMQNAGFKDSFREIHPEPEKNIGTTWIYDNEDKPLRSDRIDFIYYQ 265

Query: 264 QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDY 302
               + +  ES+++ L      +       SDH  +   +
Sbjct: 266 GKTIRAITSESYNQELTKPLKFMGEEFFYPSDHGFVMTTF 305


>gi|229366136|gb|ACQ58048.1| DNA-apurinic or apyrimidinic site lyase [Anoplopoma fimbria]
          Length = 310

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 73/303 (24%), Gaps = 73/303 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ SWN++ L      +                  + +    D++ LQE          
Sbjct: 55  MKITSWNVDGLRAWVKKNG---------------LDWVREEAPDVLCLQETKCSE----- 94

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  I    E    +         ++ +A+  K   +        G          R
Sbjct: 95  -KALPAEITSMPEYPHKYWAASDEKQGYSGVAMLCKTEPLKVT----YGIGKEEHDKEGR 149

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       +++  ++ +        +               L        +   
Sbjct: 150 -----VITAEFPNFYLVTTYVPNSSKGLVRLDYRKTWDEDFRAYLSEL--------DMQK 196

Query: 204 PFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N     +                   + +  +  +     F +    + NA 
Sbjct: 197 PLVLCGDLNVAHQEIDLKNPKGNKKNAGFTVEEREGFGQLLGSGFADSFRELYPEQANAY 256

Query: 249 KNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            +DYF             S S +    D         SDHCPI+
Sbjct: 257 TFWTYMMNSRGKNVGWRLDYF-----------LLSSSLLPGLCDSKIRSKALGSDHCPIT 305

Query: 300 IDY 302
           +  
Sbjct: 306 LHI 308


>gi|86131132|ref|ZP_01049731.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
 gi|85818543|gb|EAQ39703.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
          Length = 312

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 83/305 (27%), Gaps = 41/305 (13%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG- 75
            A    K+ + SWNI  L             KR T    L+ +       D++ +QE+  
Sbjct: 32  PAKSKTKLLIASWNIANLGLH----------KRWTIHAALIAEIIDWF--DLIAIQEVNV 79

Query: 76  SYNAVAKVFPKN--TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +   + ++       + + +S +   N       +            V +  + +  +  
Sbjct: 80  NLEGLRQIEAALPSHYNLLFSDKAGNNERFAYIFDSRVVKQLEMVGEVAIPPKDHKYIKL 139

Query: 134 KD--SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               S     +R       +       +L++H           +  +     +++    +
Sbjct: 140 PGVTSSFTGFDRNPYLGSFQWRNTNFVLLNVHSYFGSNSKKNIHRRALETYAIARHTDLM 199

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            +      +     +  GDFN  +  +   D  +K +          +          N+
Sbjct: 200 GNSKYAFSDK---IIALGDFNLPL--VEPGDLIYKALVKRGL-----ELPKHSTKVYSNI 249

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG------------KRLSDHCPIS 299
            +    D      +    +         ++                      LSDH PI 
Sbjct: 250 ADDKMYDQIAFLPSLKNTIQANG--TFDFDNAVFPDLWQESHSRFKSYVKYYLSDHRPIW 307

Query: 300 IDYDF 304
           +   F
Sbjct: 308 MQIAF 312


>gi|322496795|emb|CBZ31865.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 653

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 76/302 (25%), Gaps = 63/302 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A+    +R++++N+  +             +   +   +     ++   D++ LQE 
Sbjct: 5   STFAAGELPIRVLTFNLWGIFN----------SRMREARMKVFATKIEHY--DVILLQEQ 52

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S      +F                     S      A+  R    +    ++PL G  
Sbjct: 53  FSVEDFDLIF---QHASPAVQRTYTFRRFCSSFYGSGCAVISRYPISQAFFHTFPLQGYP 109

Query: 135 D---------SFSRAGNRRAVELLVEING----KKIWVLDIHLKSFCFLDSL--ENTYSP 179
           +         +   A  R  V + +E       +++ +   HL +     S         
Sbjct: 110 EMVLHGDFFANKGAAMVRVMVPVTMEDGSAANAQEVTLYTTHLVAVYEKVSQLSSWKRER 169

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------------- 220
                  QA    D+I          +I GDFN     L                     
Sbjct: 170 YLPFRISQAISFADFIVSTSRPTDRIIIGGDFNCSQRSLEVQMMLILLKRYGYDMHSVLP 229

Query: 221 -----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNA 266
                 D      +       F     +  N+ K                ID+    + A
Sbjct: 230 PPRALRDAATAEQEREGGQRFFTYSDSNTFNSMKTSYFKLLKLEADIPSQIDHIFFSRPA 289

Query: 267 YK 268
           + 
Sbjct: 290 FA 291


>gi|225856435|ref|YP_002737946.1| metal-dependent hydrolase [Streptococcus pneumoniae P1031]
 gi|225725346|gb|ACO21198.1| metal-dependent hydrolase [Streptococcus pneumoniae P1031]
          Length = 271

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|207727621|ref|YP_002256015.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2]
 gi|206590860|emb|CAQ56472.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2]
          Length = 261

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 81/304 (26%), Gaps = 73/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S N+N +        +                +    DAD V +QE+         
Sbjct: 2   LRIISANLNGVRSAASKGFF---------------DWMGKQDADFVCVQELKCAQD---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +    F +        +         A    +           ++G       A  R
Sbjct: 43  ---DMTPEFLAPHGYHGVFQHAVKKGYSGAGLYARHQP-----DDVIVGFDGGEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE    K+ ++ +++ S    +  +        L  Q    L+       E   
Sbjct: 95  Y-----VEARYGKLSIISVYVPSGSSGEERQQAKYRFMDLFMQHLVDLRH------EKGR 143

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             V+ GD N     +   +                +   +      +   +  D+R    
Sbjct: 144 EIVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWLTRLFDEVGYVDVFRTLDTRPEQY 203

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          + S             R  + SDH P++
Sbjct: 204 TWWSNRGQAYAKNVGWRIDYQIATPGIAATARRTSI-----------FRDIKFSDHAPLT 252

Query: 300 IDYD 303
           +DYD
Sbjct: 253 VDYD 256


>gi|193216945|ref|YP_002000187.1| membrane nuclease [Mycoplasma arthritidis 158L3-1]
 gi|193002268|gb|ACF07483.1| membrane nuclease [Mycoplasma arthritidis 158L3-1]
          Length = 346

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 87/318 (27%), Gaps = 46/318 (14%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   A +A  +R   WNI              +  +       +    K LD D++ L E
Sbjct: 44  LSPRAKMANDLRWGHWNIL------------KASNKKDDKLKSIAAVIKKLDYDLIGLTE 91

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAIAVRKKNVRVLQ--- 125
           +   +A+  +           +   I+  K            H  I  +   ++ L    
Sbjct: 92  VLDSSAIQSIVDHLNSIHGTKSYEYISSQKLKGKQASPGQAEHVGIIYKNDKLKPLPFVN 151

Query: 126 -----QSYPLLGAKDSFSRAGNRRAVELLVEINGK----KIWVLDIHLKSFCFLDSLENT 176
                            +    R       E   +    K+  +  H  S    +  +  
Sbjct: 152 NTIGYSYTSSFSHHPLTNAEYVRPPFGAQFEWKTRLKKDKLTFVFDHFDSPGAKNGEQTI 211

Query: 177 YSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
           +         +AQ L + +   +          AGD N K+N        +  ++     
Sbjct: 212 HGMGAQE-YVEAQQLPNVLLTFETMSQSKNIFFAGDTNIKVNKESI---AFSNLNNYTKA 267

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------FLIQESFSEILYNEDDIK 286
                  +S   ++   +   P D      N           + ++       Y      
Sbjct: 268 -FDDNLSNSTSLSDTPNQYSQPYDKIFYKTNLLLNQAFIYDLWNVKNDSQVNSYLSILKS 326

Query: 287 SRGK--RLSDHCPISIDY 302
           +  +  ++SDH PI +D 
Sbjct: 327 AYLEPKKISDHAPIGVDI 344


>gi|307095030|gb|ADN29821.1| salivary inositol polyphosphate 5-phosphatase [Triatoma
           matogrossensis]
          Length = 315

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/341 (12%), Positives = 93/341 (27%), Gaps = 70/341 (20%)

Query: 1   MIRKYVLALVFFLVPC------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M  K +L   F  +         +++ + V   +WN+             +  K  T   
Sbjct: 1   MNLKILLLFSFVCLVSIHAKDANSALPRTVYAATWNV----------GEGDPPKSVTQLL 50

Query: 55  TLLRQYAKNLDADI--VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
             +  Y    + DI  + LQE+    A A +  +N W          +++     ++   
Sbjct: 51  GQISNY--ETNPDIVIIGLQEVSMNPATATI-QQNKWTKEIDGVLKSSNNYVKVKSEALL 107

Query: 113 AIA----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
            +     V+ K  + L              + GN+  V +   +N +   +++ HL +  
Sbjct: 108 GMLLKVYVKVKFEQSLDSPNATTVMTGQGGKFGNKGGVIIKFHLNNQWYCIVNSHLPA-- 165

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWK 226
                 +       +   Q    +       +        GD N ++    N D      
Sbjct: 166 ------HDGKLQDRIRDYQLIN-EKRKGFCNKQSDYIFWLGDLNFRLTDEKNLDANKILG 218

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRN-------------------------KIPIDYFV 261
            I+ N       K++ +    +                                  D  +
Sbjct: 219 LINQNKLTDLLQKDELTNNKGSVFTDFTEQPITFAPTFKLKKGKGEYKLERRPAWTDRVL 278

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +  K +                 +  R SDH P+   +
Sbjct: 279 YKSDTNKKIT---------TTLYSSVKSYRESDHYPVQAQF 310


>gi|167585165|ref|ZP_02377553.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu]
          Length = 274

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 83/310 (26%), Gaps = 68/310 (21%)

Query: 12  FLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             VP     A   ++  VSWN++      G + W             +R + ++  AD+ 
Sbjct: 7   LSVPFAEPHAAPDELTAVSWNLHKGRTPLGFTAWN-----------AMRDWMRSTHADVY 55

Query: 70  FLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           FLQE  +                 +A   V+      I ++ +  I              
Sbjct: 56  FLQEAMARRLPRPMLAPGFGAPMNDAYDDVWHCQATEIAHALDWQIALGPNVFKPSWRHG 115

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+   +   L   + +        R   R  +     + G + + +L  HL        
Sbjct: 116 NAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGARPVTLLCAHLALT----- 165

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                    +   +Q  W+  WI +  +   P V+AGDFN   N           +    
Sbjct: 166 --------RAARLRQMHWIAHWIVRHAKDG-PLVLAGDFNDWRNDSIP-------LFGEI 209

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                    + +D   +                    +        L
Sbjct: 210 GLTEVATLLGESGRTFPAFSPALALDKMFVRGM------------TPLEWNAPSGETAWL 257

Query: 293 SDHCPISIDY 302
           SDH P     
Sbjct: 258 SDHLPYIARL 267


>gi|330446349|ref|ZP_08310001.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328490540|dbj|GAA04498.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 379

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/368 (11%), Positives = 95/368 (25%), Gaps = 92/368 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNA 79
           + +R+  +N++  SE E   +   + K     +  L    ++++AD++ L E        
Sbjct: 13  KSIRVAMFNVSM-SEPESGRILHQTEKADNKRFQRLAAIIQHVNADVLLLCEFDHLGQGG 71

Query: 80  VAKVFPKNTWCIFYSTERLINH--------------------------------SKRDSN 107
                          ++   N                                       
Sbjct: 72  DDGSLNNFCQHYLAQSQYQQNAISYPYRYCPPSNTGLLSPVDLNGDGMCTLPEDGLGFGE 131

Query: 108 NDIHTAIAVRKKNVRVLQQ------------------SYPLLGAKDSFSRAGNRRAVELL 149
              H +  +  K      +                        A     R  ++  V + 
Sbjct: 132 FHGHFSFVILSKYPLNEDKIRTWQTLLWKTMPNALLPKDYYSEAAQEVLRLSSKNHVVVP 191

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---------- 199
           V ++GK+I +L  H     F  +       +      + Q L D I              
Sbjct: 192 VLVDGKEINLLCCHPTPPVFDGNE----RRNAKRNHDEIQLLIDIIENAPYLIDDKKQAG 247

Query: 200 --ESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNL 251
             E    F++ GD N  + +  G      + +  +             + +   +     
Sbjct: 248 GLEPEDAFIVMGDLNADMVDGDGIKSAIQRLLKHHKINRTVSCGVNTPKSEGGQHYYPWQ 307

Query: 252 RNKIP-----------IDYFV------MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           + K             +DY +      +  ++  +  +      L  +   K +    SD
Sbjct: 308 KRKGRKNEWTHLAGLRLDYVLPSTHLVVSNSSVFWPDKHDPLRHLILDCKGKEKPTAGSD 367

Query: 295 HCPISIDY 302
           H  + +D 
Sbjct: 368 HRMVWVDI 375


>gi|325186514|emb|CCA21054.1| 2' putative [Albugo laibachii Nc14]
          Length = 580

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/353 (10%), Positives = 89/353 (25%), Gaps = 64/353 (18%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEG-------VSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           +   +     +R++S+NI                     S         L+    + +  
Sbjct: 226 LTSESKPTSSIRVMSYNILYNGYTTKEPGHVSVFPYTTPSFLNEHYRLQLVLLEIQEMFP 285

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI---NHSKRDSNNDIHTAIAVRKKNVRV 123
           DIV LQE+G       + P      ++ T                       +    + +
Sbjct: 286 DIVCLQEVGMDVYHTILLPVLQLKGYFGTIAEKTGTTREGCAIFYKQARFQVIESHVLDI 345

Query: 124 LQ--------------QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSF 167
                           Q YP +      + +  +  +    +   + +  +++  +   F
Sbjct: 346 SALLTAPTQSSIQSVLQVYPEIAKCVQSAPSIAQVLLLQYFDESASQEPKYLVVSNTHLF 405

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
              D+       +  ++ +    ++      K  L+  +++GD+N        +     +
Sbjct: 406 YRDDAHMCRLLQTLPIVYKIQDIMQS--EAYKNELIGVIMSGDYNSLPATAPVSFLLSGS 463

Query: 228 IDPNDSLIRFPKEKDS-----------------------------------RCNANKNLR 252
           ID +       K                                           N    
Sbjct: 464 IDQSHRDWGSAKYFKWKQKKWKKKNERNLNEMNGFKRSFKNILELMSACGCPEFTNYVEN 523

Query: 253 NKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               +DY  + +           F++    E+         SDH  + +D  F
Sbjct: 524 FNGTLDYIFISKETLEVVQTFPMFTKEQVTEEVALPSSIFPSDHISLLVDVAF 576


>gi|218667695|ref|YP_002425139.1| endonuclease/exonuclease/phosphatase family protein
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218519908|gb|ACK80494.1| endonuclease/exonuclease/phosphatase family protein
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 250

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/287 (10%), Positives = 78/287 (27%), Gaps = 60/287 (20%)

Query: 28  SWNI---------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S+NI           +       +  +   ++  +   +    +    D+  L E+ + +
Sbjct: 3   SFNIQVGIGSHRARHMFLHGWKYVMPH--GQSLRNLERIAAVLEGT--DVAGLNEVDAGS 58

Query: 79  AVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             ++   +  +    +        + RD  +    +  +  +       ++ L    +  
Sbjct: 59  FRSQYVNQAGFLADRAHFPYWAQQRTRDFGDFAQHSNGILSRWPIEETIAHSLPSFMNG- 117

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  +E  +   G+ + V+  HL               S      Q + L   +  
Sbjct: 118 -----RGMLENRLNAGGRSLTVIITHLGL-------------SRHARLSQIRDLAQRLRG 159

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           +       ++ GD N             + +     L   P           +   +   
Sbjct: 160 RPN----LILMGDLNCTARSPE-----MRLLLNESGLQAPPWSPP----TFPSWSPRFSF 206

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           D+ +   +    +I              ++  + LSDH  +     +
Sbjct: 207 DHILCSPDLEFTMI--------------ETVTEPLSDHLALKAKLRW 239


>gi|160895788|ref|YP_001561370.1| exodeoxyribonuclease III Xth [Delftia acidovorans SPH-1]
 gi|160361372|gb|ABX32985.1| exodeoxyribonuclease III Xth [Delftia acidovorans SPH-1]
          Length = 267

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 76/277 (27%), Gaps = 62/277 (22%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           +  + +    D + +QE+ +  A             +     +      +    ++ + V
Sbjct: 20  VEAWIEATAPDCICVQEIKAQAA--------DMTGRFELLAGLRGHFHYAEKKGYSGVGV 71

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             ++         ++G       A  R  VE   +   +K+ ++  +  S    +  +  
Sbjct: 72  YSRHEPSDV----VVGFGSHEFDAEGRY-VEARFDTPARKLSIISAYFPSGSSGELRQTA 126

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                    +    + + + + K     F++ GD N                        
Sbjct: 127 K-------FRFLAEMHEHLMRMKGERE-FILCGDINIAHQQIDLKNWRSNQKNSGFTPEE 178

Query: 221 NDDFWKTIDPNDS----LIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNA 266
            +   K +   D     +  +   +    +A      N+           +DY +     
Sbjct: 179 REWMTKLLHKTDPTGGLVDVYRLLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 E              +  + SDH P++I YD
Sbjct: 239 AALARTEHI-----------YKDVKFSDHAPVTIGYD 264


>gi|119469597|ref|XP_001257953.1| sphingomyelinase family protein, putative [Neosartorya fischeri
           NRRL 181]
 gi|119406105|gb|EAW16056.1| sphingomyelinase family protein, putative [Neosartorya fischeri
           NRRL 181]
          Length = 481

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/341 (11%), Positives = 76/341 (22%), Gaps = 76/341 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+++ N   L       L K   +R +     L     +   +IV LQE  +      
Sbjct: 17  EIRILTLNCWGL-----KYLAKYRHERLSEIGRQL--VLADPPPEIVGLQECWTQQDYES 69

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSF 137
           +  + +  + Y                    +A+  K        Y         A    
Sbjct: 70  IRQQTSHILPYGKFYFGGIFGA--------GLAILSKWPIEESTMYAYPLNGRPTAFFRG 121

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                +      +    +   V ++           E   S  C   + QA  +   +  
Sbjct: 122 DWFVGKGVACARIRFGPEVGDVAEVFCTHLHAPYEREPNDSYIC-HRTAQAWEIAKLMRG 180

Query: 198 KKESLVPFVIAGDFNRKINY--------LGNNDDFWKTIDPNDSL--------------- 234
             E     +  GDFN   +              D W+ + P+ S+               
Sbjct: 181 AAERGHLVIGLGDFNMIPSSFAHQLIHAHAPVRDVWQVLHPDSSVGAAIDLPEQKRNRPV 240

Query: 235 ---------IRFPKEKDSRCNANKNLRNKI-------------------PIDYFVMDQNA 266
                         +             K                     +DY  +    
Sbjct: 241 PTAEFNLLENGATCDGMFNTWRWSKEDRKRLEKGEDVVVDKDAPCPRGKRLDYIFVGDGG 300

Query: 267 YKFLIQESFS----EILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y               +       +    LSDH  +     
Sbjct: 301 YPPAYPAPRWSVQSVGVGMTQRHPTLRCSLSDHFAVEAVIS 341


>gi|148989840|ref|ZP_01821134.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|148992423|ref|ZP_01822118.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|168488429|ref|ZP_02712628.1| metal-dependent hydrolase [Streptococcus pneumoniae SP195]
 gi|168492909|ref|ZP_02717052.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC3059-06]
 gi|221231555|ref|YP_002510707.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854267|ref|YP_002735779.1| metal-dependent hydrolase [Streptococcus pneumoniae JJA]
 gi|237650468|ref|ZP_04524720.1| metal-dependent hydrolase [Streptococcus pneumoniae CCRI 1974]
 gi|237821902|ref|ZP_04597747.1| metal-dependent hydrolase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147924782|gb|EDK75866.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147928740|gb|EDK79753.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|183572906|gb|EDT93434.1| metal-dependent hydrolase [Streptococcus pneumoniae SP195]
 gi|183576858|gb|EDT97386.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC3059-06]
 gi|220674015|emb|CAR68528.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225723039|gb|ACO18892.1| metal-dependent hydrolase [Streptococcus pneumoniae JJA]
 gi|332073115|gb|EGI83594.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA17570]
          Length = 271

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|317016979|gb|ADU86111.1| beta-hemolysin [Staphylococcus aureus]
          Length = 164

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 56/168 (33%), Gaps = 17/168 (10%)

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKES 201
           +  V   +E NGK I V+  H +S    DS          + ++Q + + D++ +     
Sbjct: 1   KGFVYTKIEKNGKNIHVIGTHTQS---EDSRCGAGH-DRKIRAEQMKEISDFVKKKNIPK 56

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-----CNANKNLRNKIP 256
                I GD N          D  K ++ ND L                  N        
Sbjct: 57  DETVYIGGDLNVN-KGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEH 115

Query: 257 IDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRL----SDHCPI 298
           +DY   D++  +   L+ E  +E     D        +    SDH PI
Sbjct: 116 LDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPI 163


>gi|308067067|ref|YP_003868672.1| hypothetical protein PPE_00252 [Paenibacillus polymyxa E681]
 gi|305856346|gb|ADM68134.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 273

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 79/281 (28%), Gaps = 49/281 (17%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST------------ 95
           +        L  +      D++ LQE+        + P +    + +             
Sbjct: 14  ENQHDKLKQLAAFIDEQQFDVIALQEVNQSMEETPLSPDDLGAYYSADPEVGIKRDNYAY 73

Query: 96  ---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                                      +A+  K       +  +   +D +    +R+ V
Sbjct: 74  VLNGLLSDSYHWTWAPAHIGFAKYDEGLAILSKTPITATVNEYVSSLQD-YDNYRSRKIV 132

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
            +   + G + W +  H   +   +S    +  +  +L   A               P  
Sbjct: 133 GIQTVVGGVQAWFVSGHYNWWNDEESFRGLWDRTTKVLHSFA-------------PTPVF 179

Query: 207 IAGDFNRKINYLGN-NDDFWKTIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFV 261
           + GDFN      G   D   ++   +       +++           ++    + ID+  
Sbjct: 180 MMGDFNNAAEVRGEGYDYVLQSGWSDTYPNAAVRDEGHTVIKAIAGWESNAEPLRIDFIF 239

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++      +Q S   +          G+ +SDH  ++++ 
Sbjct: 240 SNKAVQ---VQSSTVVLNGKT------GRVVSDHFGVAVEL 271


>gi|146077870|ref|XP_001463362.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134067447|emb|CAM65720.1| inositol phosphosphingolipid phospholipase C-Like [Leishmania
           infantum JPCM5]
          Length = 653

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 76/302 (25%), Gaps = 63/302 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A+    +R++++N+  +             +   +   +     ++   D++ LQE 
Sbjct: 5   STFAAGELPIRVLTFNLWGIFN----------SRMREARMKVFATKIEHY--DVILLQEQ 52

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S      +F                     S      A+  R    +    ++PL G  
Sbjct: 53  FSVEDFDLIF---QHASPAVQRTYTFRRFCSSFYGSGCAVISRYPISQAFFHTFPLQGYP 109

Query: 135 D---------SFSRAGNRRAVELLVEING----KKIWVLDIHLKSFCFLDSL--ENTYSP 179
           +         +   A  R  V + +E       +++ +   HL +     S         
Sbjct: 110 EMVLHGDFFANKGAAMVRVMVPVTMEDGSAAKAQEVTLYTTHLVAVYEKVSQLSSWKRER 169

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------------- 220
                  QA    D+I          +I GDFN     L                     
Sbjct: 170 YLPFRISQAISFADFIVSTSRPTDRIIIGGDFNCSQRSLEVQMMLILLKRYGYDMHSVLP 229

Query: 221 -----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNA 266
                 D      +       F     +  N+ K                ID+    + A
Sbjct: 230 PPRALRDAATAEQEREGGQRFFTYSDSNTFNSMKTSYFKLLKLEADIPSQIDHIFFSRPA 289

Query: 267 YK 268
           + 
Sbjct: 290 FA 291


>gi|145592926|ref|YP_001157223.1| endonuclease/exonuclease/phosphatase [Salinispora tropica CNB-440]
 gi|145302263|gb|ABP52845.1| Endonuclease/exonuclease/phosphatase [Salinispora tropica CNB-440]
          Length = 1091

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/375 (8%), Positives = 75/375 (20%), Gaps = 103/375 (27%)

Query: 26  LVSWNINTLSEQEGVSLW--------------------KNSVKRTTSDYTLLRQYAKN-- 63
           + ++N+  L +                             S +        L     N  
Sbjct: 609 VAAYNVENLYDFRDDPFDGCDFAGNDGCTGVRPPFDYVPGSEQEYRDQLAALADQIINDL 668

Query: 64  LDADIVFLQEMGSYNAV--------------AKVFPKNTWCIFYSTERLINHSKRDSN-- 107
              D++ +QE    +                A   P +   +  +       +   +   
Sbjct: 669 HSPDLILIQETEDQDICTVDGTTLVCGSTNDADGAPDSLQELALTIADNGGPAYAAAYDR 728

Query: 108 -----NDIHTAIAVRKKNVRVLQQSYPLL------------------------------- 131
                  I +A   R   V + + +                                   
Sbjct: 729 SGADDRGISSAFLYRTDRVAMAEATADDPLLGSAPTIQYRAPGLPSNADVQNPKALNAVL 788

Query: 132 ------GAKDSFSRAGNRRAVELLVEI-----NGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                            R        I     +G++  +           D         
Sbjct: 789 PPDVDTSTGKDGDNVFTRAPQLGRFTIAAAPGSGERFTLWAASNHYSSGPDRRVGQRREQ 848

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWKTID-- 229
            +  +              +     V  GD N                 +D      +  
Sbjct: 849 AAYGAA-----IVSAIAASDPDARVVFGGDLNVFPRPDDPIATAADPTPSDQLGPLYEVG 903

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN--EDDIKS 287
            ++       +  S   +         +D+  + +  +  L+Q   + +  +   +    
Sbjct: 904 LHNLWDDLLADAPSSAYSYSFAGQAQTLDHLFVTEALHDDLVQMRAAHVNADWPAEYAGD 963

Query: 288 RGKRLSDHCPISIDY 302
             +  SDH P    +
Sbjct: 964 GSRGASDHDPQVARF 978


>gi|312797575|ref|YP_004030497.1| Exodeoxyribonuclease III [Burkholderia rhizoxinica HKI 454]
 gi|312169350|emb|CBW76353.1| Exodeoxyribonuclease III (EC 3.1.11.2) [Burkholderia rhizoxinica
           HKI 454]
          Length = 262

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 75/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +        +                +    +ADIV +QE+        +
Sbjct: 2   LRVITANLNGIRSATKKGFF---------------DWFGEQNADIVCVQEIKCSQ--DDM 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+      ++        K  S   I+T             +  P        S+A + 
Sbjct: 45  TPEFLAPHGFTGYFQHAQKKGYSGAGIYT-------------RHEPDEFIAGFGSKAFDH 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +      + ++ +++ S    +  +                L+           
Sbjct: 92  EGRYVELRYGD--LSLVSVYVPSGSSGEERQAVKYRFMDDFYAHLDALRR--------ER 141

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  GD N     +   +                +   +      +   +  D R    
Sbjct: 142 EVIFCGDINIVHKEIDIKNWKSNQKNSGCLPEERAWLSKVFDKLGYVDVFRALDPRPEQY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +          + S             R  + SDH P++
Sbjct: 202 TWWSNRGQAYAKNVGWRIDYQIATAGIASTARRTSI-----------FRDIKFSDHAPLT 250

Query: 300 IDYDF 304
           IDYD+
Sbjct: 251 IDYDY 255


>gi|254477651|ref|ZP_05091037.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11]
 gi|214031894|gb|EEB72729.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11]
          Length = 361

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/340 (12%), Positives = 96/340 (28%), Gaps = 56/340 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             T     +VR+ ++N   LS +    L ++ +++       + +     D DI+ LQ M
Sbjct: 21  TATIPQTDRVRIATFNTE-LSRKGPGLLLRDLLRQKDPQIAAVAETITAADPDILLLQGM 79

Query: 75  G------SYNAVAKVFPKNTWCIFYSTERLINHS-------------------KRDSNND 109
                  + NA A +  +      +      N+                    +      
Sbjct: 80  DWDLNSATLNAFADLLAETIAPYPHRFAPRPNNGLATGLDMDGNGRLGDARDAQGYGRFT 139

Query: 110 IHTAIAVRKKNVRVLQQ---------------SYPLLGAKDSFSRAGNRRAV-------- 146
               +A+  ++     Q                 P+      F  A  + A         
Sbjct: 140 GQGGMALLSRHPIHSSQIRDLSALLWKDLPGAVLPVHPDGSPFPSAEAQGAQRLSSKGHW 199

Query: 147 ELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            + +++ +   + ++     +  F    +     +   +      L   +        PF
Sbjct: 200 VVPIQLRDDVTLTLMAFQATTPLFDGEEDRNGLRNRDEIRLWQVLLDGDLGPM--PTPPF 257

Query: 206 VIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-LRNKIPIDYFVMD 263
           VIAG  +       G+ D  ++ +         P + D            ++ +DY ++ 
Sbjct: 258 VIAGGASLDPRRGAGHRDTIFRLLQDPRLQDPRPTDADGHVATVNWGRSGRMRVDY-LVP 316

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             A   L             D     +  S H  + ID +
Sbjct: 317 SRAMNVLDAGLIWPAEIPAPDG-DGDRLASRHALVWIDLE 355


>gi|268561416|ref|XP_002646438.1| Hypothetical protein CBG18823 [Caenorhabditis briggsae]
          Length = 382

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 87/299 (29%), Gaps = 49/299 (16%)

Query: 23  KVRLVSWNINTLSEQ---------------EGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           ++ L+SWNI+ L  +                  +       R    +  + +    ++ D
Sbjct: 113 ELSLMSWNIDGLDGRSLATRMKAVATIVKKTPQNPIFRPKNRVLEIFQKIAR-MAQVNPD 171

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           I+FLQE+   +       ++ + I+YS +              +TAI V  K   V +  
Sbjct: 172 ILFLQEVVDRDLEPIDKLQSLYKIYYSNKGC----------QYYTAILV-SKMFEVEKHD 220

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                     +    R    +   I G K+++++ HL+S     +        C     +
Sbjct: 221 V-----VHFQNSGMYRTLQIVEGSIGGMKVFLVNTHLESMRDHRAQRMAQFSFCMDRCAE 275

Query: 188 AQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFWKTIDPN-DSLIRFPKEKDSR 244
                                GD N   +      +      +    D+  ++  +    
Sbjct: 276 IIA--------NNPGCFLFFGGDLNLRDEEISSIPDGVLDAWVSAGCDTKTKWTWDTYKN 327

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            N       K+  D         +        +       I+S     SDH  I+  + 
Sbjct: 328 DNKQGFNGAKMRFDRIYWHGPFNQVHFSLEGRQ------RIRSCLCFPSDHWAINATFS 380


>gi|168484835|ref|ZP_02709780.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1873-00]
 gi|172042000|gb|EDT50046.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1873-00]
 gi|332203913|gb|EGJ17980.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA47368]
          Length = 271

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              N  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAMLNW 270


>gi|26326093|dbj|BAC26790.1| unnamed protein product [Mus musculus]
          Length = 492

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/345 (11%), Positives = 90/345 (26%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 123 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ 182

Query: 79  AVAKVFPKNT---WCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +  F+S          +   +               V+K  V   Q 
Sbjct: 183 YFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 242

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 243 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP 302

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 303 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 362

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 363 GGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 422

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 423 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 467


>gi|307131722|ref|YP_003883738.1| putative deoxyribonuclease [Dickeya dadantii 3937]
 gi|306529251|gb|ADM99181.1| putative deoxyribonuclease [Dickeya dadantii 3937]
          Length = 292

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 100/311 (32%), Gaps = 29/311 (9%)

Query: 1   MIRKY--VLALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M+RKY  V+A     +  +ASV +    + S N   L           S   TT+  T +
Sbjct: 3   MLRKYSVVIATFLLAMTISASVRSADFVVGSLNTLHLGW--------GSATNTTNKCTEI 54

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                ++  DI+ LQE+     +    P         T+  +    + S  + +  +  +
Sbjct: 55  ANLMGSV--DILLLQEV-----MQLAVPCTNLGTGLGTDCSLTMLGKTSYKEAYCFVYKK 107

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            K                + S +    A+ + V++     +V   ++ S           
Sbjct: 108 SKMTFAN-----CYYNAPTASFSRPPYAILMAVKVGTTNKYVWFANIHSIFGKTVGPRQA 162

Query: 178 SPSCSLLSQQ-AQWLKDWITQKKESLVPFVIAGDFNRKINYL-GNNDDFWKTIDPNDSLI 235
             S + +  Q  Q +         +  P +I GD+N  +    G+    +   DP  +  
Sbjct: 163 EASAAGIFFQTLQNITCSPIAIPTNGFPVIIGGDWNLSVTSSNGSYTTGFSWADPTGNPA 222

Query: 236 RFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
             P    +    +         P D+ ++   +       S            +  K +S
Sbjct: 223 TVPAACPANAATSLTPAGAPSSPYDHIIITGISLTGANTCSI--YPTTSAARTTWRKTVS 280

Query: 294 DHCPISIDYDF 304
           DH  +  + DF
Sbjct: 281 DHMAVYWEVDF 291


>gi|221043532|dbj|BAH13443.1| unnamed protein product [Homo sapiens]
          Length = 275

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 85/285 (29%), Gaps = 52/285 (18%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A  +R+ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N 
Sbjct: 17  SALAMRICSFNVRSFGE---------SKQEDKNAMDVIVKVIKRC--DIILVMEIKDSN- 64

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             ++ P                              + ++ +  +++SY     +D  + 
Sbjct: 65  -NRICPILMEK-------------------------LNREKLVSVKRSYHYHDYQDGDAD 98

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +R    +  +     +    I                 S   + +  +   D   + K
Sbjct: 99  VFSREPFVVWFQSPHTAVKDFVITPLHTTPET--------SVKEIDELVEVYTDVKHRWK 150

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                F+  GDFN   +Y+         +  +   +    +++              I  
Sbjct: 151 AEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRI-- 206

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
            +  Q     ++ +S S   + +    +  + L  SDH P+    
Sbjct: 207 VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 251


>gi|307329480|ref|ZP_07608641.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
 gi|306884889|gb|EFN15914.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
          Length = 368

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 76/282 (26%), Gaps = 67/282 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           +R+++ N+     ++G                 L    +    D+V +QE  +    A+ 
Sbjct: 146 LRVMTANLEFGQARDG-----------------LLTALRRERPDLVAVQECDTECAEALE 188

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +           +      +      A+  ++             ++   R  
Sbjct: 189 TAAVRTAY----------PYRSIALGDSPAAGSAILSRHPL----------TREEGVRGT 228

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +V I G+++ +   H                   +   +   L+ +       
Sbjct: 229 LRMP-GAVVRIAGQRLRLQVAHPMPPMPGQ---------LDVWRTELGRLRSYAAG--RG 276

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P +IAGDFN   ++          +  +       +       +         ID+ +
Sbjct: 277 EEPTLIAGDFNATQDHAAFRAVLDTGLRDSARATGVSRTPSWP--SATAPVLGAQIDHVL 334

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +          F E+ +             DH  + ++ D
Sbjct: 335 ASRALRPR--TARFLELPHT------------DHRALLVELD 362


>gi|296225531|ref|XP_002758535.1| PREDICTED: deoxyribonuclease gamma-like isoform 2 [Callithrix
           jacchus]
          Length = 275

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 81/285 (28%), Gaps = 52/285 (18%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A  +++ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N 
Sbjct: 17  SALALKICSFNVRSFGE---------SKQEDQNAMDVIVKVIKRC--DIILVMEIKDSN- 64

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             ++ P                              +  + +  +++SY     +D  + 
Sbjct: 65  -NRICPMLMEK-------------------------LNGEKLVSVKRSYQYHDYQDGDAD 98

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +R    +  +     +    I         S+         L          W     
Sbjct: 99  VFSREPFVVWFQSPYTVVKDFVIVPLHTTPETSV----KEIDELFDVYMDMKHRW----- 149

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                F+  GDFN   +Y+         +  +   +    +++              I  
Sbjct: 150 -KAENFIFMGDFNAGCSYVPKKAWKNIRLRIDPRFVWLIGDQEDTTVKKSTNCAYDRI-- 206

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
            +  Q     ++ +S S   + +    S  K L  SDH P+    
Sbjct: 207 VLRGQEIVSSIVPKSTSVFDFQKAYKLSEEKALDVSDHFPVEFKL 251


>gi|294812176|ref|ZP_06770819.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
           ATCC 27064]
 gi|326440668|ref|ZP_08215402.1| hypothetical protein SclaA2_06358 [Streptomyces clavuligerus ATCC
           27064]
 gi|294324775|gb|EFG06418.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 251

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 65/280 (23%), Gaps = 54/280 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++S+N+ +L                  D   L +  +    D+V +QE          
Sbjct: 19  VRVLSYNVRSL----------------RDDEDALIRVVRAAAPDLVLVQEAP-------- 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                W    +                 T  + +      V +    LL       R   
Sbjct: 55  -RFLGWRKHAARLAAGAGLVVLGGGAGATGSLLLCSLRAAVERTEDVLLPRTPGLHR--- 110

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     +V     ++ V+  HL             S        QA  + + +T      
Sbjct: 111 RGLATAVVRFGAARLGVVGFHL-------------SLQARERHTQAGLVLERLTALGAPH 157

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              + AGD N             +                   +   +   +  ID    
Sbjct: 158 T--LAAGDVNEPPPGRAFRRLAGRL------QDCRALAPRGGEHTFPSTAPRRRIDAVFA 209

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                D+    +  SDH P+    
Sbjct: 210 SAEVEVLGCGVPLDLPGVTAADL----RAASDHLPVLAAL 245


>gi|149010614|ref|ZP_01831985.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147765095|gb|EDK72024.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP19-BS75]
          Length = 271

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              N  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LLEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAMLNW 270


>gi|330466603|ref|YP_004404346.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328809574|gb|AEB43746.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 257

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/282 (10%), Positives = 71/282 (25%), Gaps = 48/282 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WN+       G                 L +       D++ LQE+   +  A  
Sbjct: 2   LRVLTWNVRNGGRDSGGP----------DRRDALLRVIAQTRPDVLALQELRGLDVTA-- 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++    +      S      A+ VR     +               R  + 
Sbjct: 50  ---------FAARLGLRPYVAGSWFGQPVAVLVRPTWPVLAAAPVR---------RPFHH 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ---------AQWLKDW 194
            A  + +  +   + VL  H   +     L      + +L   +            L  +
Sbjct: 92  GAQRVTIGTDAGPLTVLSTHFYPYSGRRRLIEAGWAAAALRRARGGLALLAGDLNTLDPY 151

Query: 195 ITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
               ++ + +P        R+     +     + +      +                 +
Sbjct: 152 AEHAEQIARLPETYRRRHLRRDGRTPDTRAVARLLAAGLVDLGAAAGPTVPTGYAGAEFS 211

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            + +DY +        L+                +  + SDH
Sbjct: 212 DMRLDYLLATPALATHLLTVDVLRTP--------QTHQASDH 245


>gi|118089945|ref|XP_420472.2| PREDICTED: similar to CCR4-NOT transcription complex, subunit
           6-like isoform 2 [Gallus gallus]
          Length = 549

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 87/344 (25%), Gaps = 68/344 (19%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   + DADI+ LQE+ +  
Sbjct: 181 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVSCDADIISLQEVETEQ 240

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 241 YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFSLVQKHTVEFNQV 300

Query: 127 SYPLLGAKDSF-------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +       ++           G    +E+  E+ G  I  L +  +     ++  +    
Sbjct: 301 AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASIKSLHVDKQLLIVANAHMHWDPE 360

Query: 180 SCSLLSQQ----AQWLKDWITQKK---------ESLVPFVIAGDFNRKINY--------- 217
              +   Q       LK+ + +            + +P V+  D N   +          
Sbjct: 361 YSDVKLIQTMMFVSELKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNG 420

Query: 218 --LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKI 255
               N+ DF +       +      K+                         N     K 
Sbjct: 421 IVADNHKDFKELRYNECLMNFSGSGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFKG 480

Query: 256 PIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            IDY        N    L       ++ N           SDH 
Sbjct: 481 VIDYIFYSNTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 524


>gi|187924331|ref|YP_001895973.1| hypothetical protein Bphyt_2351 [Burkholderia phytofirmans PsJN]
 gi|187715525|gb|ACD16749.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
          Length = 226

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 30/212 (14%)

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
           +      A+  +        + L    D    +  R A+E +++ +   I V+  HL+ +
Sbjct: 27  SMRQFGNAIVTRLPVRQVLRHSLPWPADPAKPSMMRVALEAVIDTDIGAIRVISTHLEFY 86

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYL 218
              +            L ++A        + ++   PF         V+ GDFN      
Sbjct: 87  S--EKQRFAQLARLRELHREACNHARAPAKAEKIDSPFSDTARPMSAVVCGDFNSAFESS 144

Query: 219 GNNDDFWKTIDP----NDSLIRFPKEKDSRCNANK----NLRNKIPIDYFVMDQNAYKFL 270
                     D     +      P+   +                  D+  + ++    +
Sbjct: 145 AYCRMLEPIADAPRFIDAWASAHPRAPRAPTAGLYDHEQWPEGPFACDFIFVTEDLTSRI 204

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                 SDH P+ ++ 
Sbjct: 205 AACEV-----------DAVSEASDHQPMWLEL 225


>gi|312379227|gb|EFR25571.1| hypothetical protein AND_08990 [Anopheles darlingi]
          Length = 533

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/221 (9%), Positives = 56/221 (25%), Gaps = 12/221 (5%)

Query: 23  KVRLVSWNINTLSEQEGVSLW-----KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +  L+S+NI      +G  +                   L    +++  D++ +QE+   
Sbjct: 100 EFTLMSYNILAQDLLDGHLMELYRNHDPRSLPWQQRLKRLLAEIRHIRPDVLCVQELQQN 159

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +          +      ++     K D       A+  R     ++             
Sbjct: 160 HIKRFANGLADFQYEMLYKKRTGGVKTD-----GCAVFFRSDLFELIDHHEVEFFQPKVN 214

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWI 195
               +  A+   + +       L +      F    ++       +L  +          
Sbjct: 215 KLNRDNVAIIAKLALKQNPQTRLVVSTTHLLFNPFRQDVRLAQIQILLAELDRFSYSGQT 274

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                   P ++ GDFN +            ++  +     
Sbjct: 275 ANGVPQYDPVLLCGDFNLQPFTAPYRLVMKGSLRYDQLATC 315


>gi|302534003|ref|ZP_07286345.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. C]
 gi|302442898|gb|EFL14714.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. C]
          Length = 252

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 63/279 (22%), Gaps = 52/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +S+NI +L                  D   L +  +    D+VF+QE   +    K 
Sbjct: 21  IRALSYNIRSL----------------RDDEEALARVIRACAPDLVFVQEAPRFFRWRKH 64

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +               +           + +      V +    LL       R   R
Sbjct: 65  AARLAAKTDLVVLGGGATAAG--------PLLLCSLRAFVERTEDVLLPRTPGLHR---R 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V     ++ V+  HL             S        QAQ L D          
Sbjct: 114 GFATAVVRFGAARVGVVSAHL-------------SLDARERQAQAQLLLDRAAALGAPH- 159

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             + A D N                        +        +   +      ID     
Sbjct: 160 -VIAAADVNEAAGGPAFGRL------SGALQDCWTVSPWGDGDTFPSTAPTRRIDAVFAS 212

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                               D+    +  +DH P+    
Sbjct: 213 PGVEVLACGVPAGLPGVTTPDL----RAATDHLPVLAAL 247


>gi|242777536|ref|XP_002479054.1| sphingomyelinase family protein, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218722673|gb|EED22091.1| sphingomyelinase family protein, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 485

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/345 (11%), Positives = 77/345 (22%), Gaps = 76/345 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S   ++R+++ N   L       L K   +R +     +          IV LQE  +  
Sbjct: 8   SSPTRIRVLTLNCWGL-----KYLSKFRHERMSEIGRQIA--IAEDPPQIVGLQECWTQQ 60

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GA 133
               +  +    + Y                    +A+  K        +         A
Sbjct: 61  DYKSIRRQTKHLLPYGKFYYSGVFGG--------GLAILSKWPIEESSMFAYPLNGRPTA 112

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    +      + +  +   + ++           +  +       + QA  +  
Sbjct: 113 FFRGDWYVGKGVACARIRMGPRADDIAEVFCTHLHAP-YEKEPHDSYLCHRTAQAWEIAK 171

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEK---- 241
            + +  E     +  GDFN       +          D W+ + P+ S+           
Sbjct: 172 LMRRAAERGHLVIGLGDFNMVPMSFAHRLITAHAPVKDVWRHLHPDSSVGSADSAAEKKR 231

Query: 242 ------------------DSRCNANKNLR---------------------NKIPIDYFVM 262
                             D   N  +  +                         +DY  +
Sbjct: 232 GKPIPSADFNIAENGAASDGPFNTWRWPKEQQKRLFKGEDTFIDGSQPDPKGRRLDYIFV 291

Query: 263 DQNAYKFLIQESFSEILYN----EDDIKSRGKRLSDHCPISIDYD 303
               Y          I            +    LSDH  I     
Sbjct: 292 GDGGYPPSFPAPRWNIEAAWVTMMQRHPTLKVSLSDHFGIETVIT 336


>gi|156403682|ref|XP_001640037.1| predicted protein [Nematostella vectensis]
 gi|156227169|gb|EDO47974.1| predicted protein [Nematostella vectensis]
          Length = 350

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 73/283 (25%), Gaps = 30/283 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
                +++S N+            K    R       +     N + D+VFLQE      
Sbjct: 95  QGTVFKVMSMNVGY-----NKKGDKTEKARAEERIKEVVVLLNNENPDLVFLQECPRPKM 149

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +A+   K         +          N D ++ I   K  + V    +  +        
Sbjct: 150 LAEKLAKE-----LPPKPWEVWEGVKDNWDSYSCIISNKDKIEVEGHDFYKIYLNLGKKE 204

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                     + +   K     +            N         +     LK      K
Sbjct: 205 ISGEGQFLQRLFVRQVKGDGSLVASYHGRQNAIGGNGSLTDEKKKTIFRDLLKLLDEVCK 264

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           ++    +I GDFN K                 + +     + +   N  +N   K  +DY
Sbjct: 265 KAKCHVLIGGDFNLKYAIAET--------VVTEVVQERSNQYNLHTNGYQNKPRKKMVDY 316

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           F+ +          +       +           DH P+  D+
Sbjct: 317 FMYNGPQED---VRNVRVGNATDLF---------DHKPLYADF 347


>gi|148985891|ref|ZP_01818985.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147922037|gb|EDK73161.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|301799776|emb|CBW32345.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae OXC141]
          Length = 271

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAMLNW 270


>gi|15675775|ref|NP_269949.1| hypothetical protein SPy_1985 [Streptococcus pyogenes M1 GAS]
 gi|71911504|ref|YP_283054.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005]
 gi|13622999|gb|AAK34670.1| hypothetical protein SPy_1985 [Streptococcus pyogenes M1 GAS]
 gi|71854286|gb|AAZ52309.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005]
          Length = 272

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 80/307 (26%), Gaps = 65/307 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++++ N +                 T      L ++      DI+ LQE+          
Sbjct: 3   KVLTLNTH-----------SWMQANTLKKLVALAEHILAEKYDIICLQEINQLIESELAT 51

Query: 85  PKNTWCIF----------------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +                                        +     +A+  K   
Sbjct: 52  DLPRYQALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPI 111

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L+ A D  +    RR++     ++GK++ V+++HL  F               
Sbjct: 112 --HVSDILVSAMDDETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKG------------ 157

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    +    +      P ++ GDFN   +  G        +D  DS         
Sbjct: 158 ----FLGEWEKLEKELLTLNCPLLLMGDFNNPTDQDGYQVMMGSPLDLQDSHKGADHVFG 213

Query: 243 SR---CNANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 + +    NK  +  D+    ++      + +F                +SDH  
Sbjct: 214 DHSIVADIDGWQGNKEALKVDHVFTSKDFIIRSSKITFE---------GGDAPVVSDHYG 264

Query: 298 ISIDYDF 304
           + +   +
Sbjct: 265 LEVTLGW 271


>gi|209546251|ref|YP_002278141.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209539108|gb|ACI59041.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 271

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 75/280 (26%), Gaps = 55/280 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + S+N++     +              D     +    + AD++ LQE  +         
Sbjct: 39  IASYNVHKCVGTDRRF-----------DPERTSRVIHEIGADVIALQEADTRFGERTGIL 87

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   +    +  +     +  H  + + KK +        L G          R A
Sbjct: 88  DLGRLERETGLIPVPVAGMAKAHGWHGNVVLFKKGLVHDVHQVKLPGL-------EPRGA 140

Query: 146 VELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           +   +E+  G  + ++  H                     +QQA+ L + I       + 
Sbjct: 141 LVAEIELEQGGVLRIIAAHFGLLRHN-------------RAQQARMLVELIND--RREMS 185

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GD N         +         ++             +       + +D  + ++
Sbjct: 186 TILLGDLN---------EWRLGDRSSLNTFQSAFGPLPPAVPSFPAGLPLLALDRIIANR 236

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI--SIDY 302
                        I   E       +  SDH PI   +D 
Sbjct: 237 KG----------IISEVEAHDTPLARVASDHLPIKALVDL 266


>gi|268567764|ref|XP_002647867.1| Hypothetical protein CBG23668 [Caenorhabditis briggsae]
          Length = 526

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 62/215 (28%), Gaps = 20/215 (9%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F  +       +++R+V+ N   L +      W             + +Y +N   DIV 
Sbjct: 30  FAALRRNNVAPRQLRIVTLNAWCLPQP-----WPIGSTDRVHRLQKIGEYMRNETYDIVG 84

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ SYN   ++  +              H            +  R   V  L   Y L
Sbjct: 85  LQELWSYNDFVRLSEQ------VKDAYPYFHYFHSGFTGSGVCVFSRHPIVSTLTSRYSL 138

Query: 131 LGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            G      R        + +         ++     HL +       +          + 
Sbjct: 139 NGFAHHIHRGDWFGGKVVGLTEVEIDGDLRVNFYTTHLHA-----EYDRENDLYLPHRTA 193

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           Q+  L  ++          ++ GD N +   LG  
Sbjct: 194 QSFELAQFVRHTARGADVVIVTGDLNMEPCDLGFR 228


>gi|311249535|ref|XP_003123675.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Sus
           scrofa]
          Length = 552

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 184 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYS 243

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 244 FFLVELKDRGYSGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 303

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 304 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEISSGKPHLGTEKQLILVANAHMHWDPEY 363

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S        +P V+  D N   +          
Sbjct: 364 SDVKLVQTMMFLSEVKNIIDKASRSLQSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 423

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 424 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFDFKG 483

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            IDY            I          E++I         SDH  +    +
Sbjct: 484 IIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLE 534


>gi|240278178|gb|EER41685.1| inositol phosphosphingolipids phospholipase C [Ajellomyces
           capsulatus H143]
          Length = 500

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/333 (12%), Positives = 76/333 (22%), Gaps = 71/333 (21%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           N+ TL+      + +   +R       +          IV LQE  S          +  
Sbjct: 14  NVLTLNCWGLKYISEYRRERLIEIGKRIA--LSENTPHIVGLQECWSRE--------DYH 63

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144
            I   T  ++ + K   +      +A+  K        +         A         + 
Sbjct: 64  NIRRETREILPYGKFYFSGIFGGGLAILSKWPIEESTMHAYPLNGRPSAIFRGDWYVGKG 123

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + I      ++D+           E   S  C   + QA  +   +    E    
Sbjct: 124 VACARIRIGPAAADIVDVFCTHLHAPYEREPRDSYIC-HRTAQAWEIAKLMKAAAEKGHL 182

Query: 205 FVIAGDFNRKI--------NYLGNNDDFWKTIDPNDSL---------------------- 234
            V  GDFN                  D W  + P+ S+                      
Sbjct: 183 VVGLGDFNMLPQSFAHRLITSHAPVKDVWGHLHPDSSIGAAIDSAEMSRKKPVPSADFNI 242

Query: 235 --IRFPKEKDSRCNANKNLRNKI-------------------PIDYFVMDQNAYKFLIQE 273
                  +           + K                     +DY  +   ++      
Sbjct: 243 SENGATCDSILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNFSSL 302

Query: 274 SFSEILYNEDDIKSRGKR----LSDHCPISIDY 302
              +I      +  R       LSDH  +    
Sbjct: 303 RKWDIESARVCMLERHPHLHCSLSDHFGVEATI 335


>gi|269125513|ref|YP_003298883.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
 gi|268310471|gb|ACY96845.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
          Length = 305

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 79/302 (26%), Gaps = 72/302 (23%)

Query: 8   ALVFFLVPCTASVAQK------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
            L   ++P   + +Q       +R+++ N+                    +D   + +  
Sbjct: 64  VLAALVLPRAVAASQPPAHGPRLRVLTANLRF----------------GLADPDRIVELV 107

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           ++   D++ LQE+ +  AV ++       +              S               
Sbjct: 108 RHHAVDVLSLQEL-TPKAVERLNAAGLGRLLPHAVLHPRGGAAGSGLYAR---------- 156

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                    L A      A  R  + L     G K+ V  +H                  
Sbjct: 157 ----HPLRELPALPGSVFAMPRAELTL---PAGHKVEVAAVHPPPPISG----------- 198

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
             +    + L+      +      ++AGD+N  +++        +            +  
Sbjct: 199 RAVGNWMRDLRALPAAGRRGQPVRILAGDYNATLDHAHFRRVLSR-----GYADAADRAG 253

Query: 242 DSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                   +   +I   ID+ ++              +       ++      SDH  + 
Sbjct: 254 MGLTPTWSSPGGRIRLTIDHVLV--------------DRRCAVHRVRVHDLPGSDHRAVF 299

Query: 300 ID 301
            D
Sbjct: 300 AD 301


>gi|167917123|ref|ZP_02504214.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei BCC215]
          Length = 270

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 78/306 (25%), Gaps = 66/306 (21%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +     VA ++  VSWN++      G + W             +R +  +  AD+ FLQE
Sbjct: 9   LAEPLPVADEITAVSWNLHKGRSPLGFTAW-----------EAMRSWVASTHADVYFLQE 57

Query: 74  MGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             +                   V  ++      I  + +  I               A+ 
Sbjct: 58  AMARRMPRPVLAAGFGAPMAEPVDDIWHCQATEIARALDWQIALGPNVFKPSWRHGNAIL 117

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENT 176
             +   L   + +        R   R  +     +  G  + +L  HL            
Sbjct: 118 SPHPLDLGGRWDISA-----HRFERRGLLVARATLTGGAPVTLLCAHLALT--------- 163

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                +   +Q  W+  WI +   +  P V+AGDFN   N           +     L  
Sbjct: 164 ----RAARLRQMHWIAHWIERNARTG-PLVLAGDFNDWRNDSIP-------LFGEIGLSE 211

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                             + +D   +                             LSDH 
Sbjct: 212 VATLLGESGRTFPAFSPALALDKMFVRGMTPLEWRAPG------------DETAWLSDHL 259

Query: 297 PISIDY 302
           P     
Sbjct: 260 PYVARL 265


>gi|15836769|ref|NP_297457.1| exodeoxyribonuclease [Xylella fastidiosa 9a5c]
 gi|9104958|gb|AAF82977.1|AE003870_3 exodeoxyribonuclease [Xylella fastidiosa 9a5c]
          Length = 266

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 85/313 (27%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+N N L        +                +    D D++ +QE  +     ++
Sbjct: 1   MRISSFNANGLRSALSKGFF---------------DWFSTQDIDVLCVQE--TKAQRQQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +   Y        +        ++ +A+  +      ++       D   R    
Sbjct: 44  VGPDFFPAGYHVCFRDATT-----KKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE     + V+  ++ S    +  ++             +WL+  + +   S  
Sbjct: 96  ------VEARFGNLSVVSFYIPSGSSGEQRQHYKFEV-------MRWLRPILCEWLLSGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDS-----------------LIRFPKEKDSRCN 246
            +V+ GD+N   + L   +      +                     +            
Sbjct: 143 DYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDWLNGLCADSLHEVNAAQGRGWVDTY 202

Query: 247 A--------NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                         N+           IDY  +     + + + +             R 
Sbjct: 203 RVLYPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPGLRERVSRCAI-----------YRE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P +++Y
Sbjct: 252 QRFSDHAPYTVEY 264


>gi|71655513|ref|XP_816327.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL
           Brener]
 gi|70881447|gb|EAN94476.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi]
          Length = 522

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 79/318 (24%), Gaps = 67/318 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80
           ++ ++WN+  L                  D   +++  +    D + LQE          
Sbjct: 223 LKFITWNVAGLRGL------------LRKDDQAIQRLLEEEGPDALCLQETKLNPDDPQN 270

Query: 81  AKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            K+     +       R    +S   +      A   +   V+             S   
Sbjct: 271 EKLGEVPGYRFVDHVCRAKKGYSGTRTYIKNTAAAEWKTVTVKGFDTLKSPQDVGHSEGD 330

Query: 140 AGNRRAVELLVEINGK-----KIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
              R  +       GK      + +++ ++ +    L+ L          + Q    L  
Sbjct: 331 EEGR-VLTTYFGTQGKGSETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCTLGR 389

Query: 194 WITQKKESLVP-----FVIAGDFNR-------------------KINYLGNNDDFWKTID 229
                KE         F+ AGD N                              F +T+ 
Sbjct: 390 SCNHDKEEGDAPSLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLR 449

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
             +++  F                +           +DYFV+     + ++         
Sbjct: 450 VANAVDTFRALYPKAAPVYTFWSARINGRARGLGWRLDYFVVSAALARHVVDC------- 502

Query: 281 NEDDIKSRGKRLSDHCPI 298
                       SDHCP+
Sbjct: 503 ----FTMPHVMGSDHCPL 516


>gi|265754227|ref|ZP_06089416.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263234936|gb|EEZ20491.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 312

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 88/339 (25%), Gaps = 81/339 (23%)

Query: 1   MIRKY----VLALVFFLVPCTASV---AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           M++      ++A   F +          + + ++SWN+              S       
Sbjct: 1   MMKTRNLIGMIAFCLFALAACTPSKESGKTLTVLSWNVWHGGH---------SKTYPEKG 51

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
                   K  +AD++ + E                   Y    ++  S   S N I   
Sbjct: 52  CKGTIDILKKSEADVILMVET------------------YGAAPMVADSLGYSYNLISDN 93

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + +  +   + + ++    +  +F          +++++NGK + V D  L     +   
Sbjct: 94  LCIYSRYPIIRKYAFADSISTFNFGG--------VMIDVNGKPVRVFDTWLHYLPDMRLA 145

Query: 174 ENTYSPSCS-------LLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDF 224
               S              ++   +   I          P ++ GDFN   +        
Sbjct: 146 PTDKSEEEILAWEMEGTRDEEIHRILTVIRPLLAETDSIPIIMGGDFNVHSHLDWTEAT- 204

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------------------------PI 257
            + +  +   +       +   A      +                             I
Sbjct: 205 -RNLYHHGGAVVNWPVSIAMEEAGFKDSFREMNSDPVASPGVTWLADADSLETECRMDRI 263

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-KRLSDH 295
           D+        + +  E +   L      K  G    SDH
Sbjct: 264 DFIYYQGKTIQAIASECYDNSLGKTFTFKGEGFFYPSDH 302


>gi|251781652|ref|YP_002995954.1| putative RgfB protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390281|dbj|BAH80740.1| putative RgfB protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 274

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 77/280 (27%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF------------------- 92
                L ++      DI+ LQE+             ++                      
Sbjct: 19  KKLVDLAEHILAEKYDIICLQEINQLIESELAMELPSYQPIPGTPTIHKDHFALLLIHYL 78

Query: 93  ---YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+  K       S  L+ A D  +    RR++   
Sbjct: 79  KKRGQHYYWSWAYNHIGYDIYHEGVAILSKQPI--HVSDILVSAMDDETDYHTRRSLVAK 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             ++GK++ V+++HL  F                        +    +      P ++ G
Sbjct: 137 TTLDGKEVAVVNVHLSWFDKG----------------FLGEWEKLEKELLTLNCPLLLMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN   N  G        ++  DS                 +  ++ +    +D+    +
Sbjct: 181 DFNNPTNQEGYQVIMGSPLNLQDSHKVADHVFGDHSIVADIDGWEDNKEAFKVDHVFTSK 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +          S I +   D       +SDH  + +  D+
Sbjct: 241 DFDIK-----ASHITFEGGDAPV----VSDHYGLEVTLDW 271


>gi|148997164|ref|ZP_01824818.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|168575419|ref|ZP_02721355.1| metal-dependent hydrolase [Streptococcus pneumoniae MLV-016]
 gi|225860733|ref|YP_002742242.1| metal-dependent hydrolase [Streptococcus pneumoniae Taiwan19F-14]
 gi|307067363|ref|YP_003876329.1| metal-dependent hydrolase [Streptococcus pneumoniae AP200]
 gi|147756864|gb|EDK63904.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|183578405|gb|EDT98933.1| metal-dependent hydrolase [Streptococcus pneumoniae MLV-016]
 gi|225726547|gb|ACO22398.1| metal-dependent hydrolase [Streptococcus pneumoniae Taiwan19F-14]
 gi|306408900|gb|ADM84327.1| Metal-dependent hydrolase [Streptococcus pneumoniae AP200]
 gi|327390116|gb|EGE88459.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA04375]
 gi|332204768|gb|EGJ18833.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA47901]
          Length = 271

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAMLNW 270


>gi|332293566|ref|YP_004432175.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332171652|gb|AEE20907.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 364

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 73/292 (25%), Gaps = 64/292 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                 +  +++ + N+                 +   +Y LL       + DIV L E 
Sbjct: 94  STITDASNTLKIYTANV----------------LQKNEEYQLLLDQIAEKNPDIVLLMET 137

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                      K     +  +             D    + +  +      +   L+  +
Sbjct: 138 D--QLWKNAVHKTLSATYPYSMLEP--------LDNTYGMLLYSRLPMSQNKINHLVDKE 187

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                        ++   +G +  +  IH        +  ++              +   
Sbjct: 188 IPSME-------AIVTLESGNQFQLFAIHPTPPMPQHNPMSSDRD---------TEMMTT 231

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252
             +  +  +P ++ GDFN              ++    S +  P+      N        
Sbjct: 232 ALRVYKRKMPVIVMGDFNDVAWSET------TSLFRKTSTLLDPRIGRGFYNTFNAKNVL 285

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            + P+D+    +      +  +                  SDH P+  +  F
Sbjct: 286 MRWPLDHLFTSEEFRVKTLVRTKDIK--------------SDHFPMYTELTF 323


>gi|325096241|gb|EGC49551.1| inositol phosphosphingolipids phospholipase C [Ajellomyces
           capsulatus H88]
          Length = 500

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/333 (12%), Positives = 76/333 (22%), Gaps = 71/333 (21%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           N+ TL+      + +   +R       +          IV LQE  S          +  
Sbjct: 14  NVLTLNCWGLKYISEYRRERLIEIGKRIA--LSENTPHIVGLQECWSRE--------DYH 63

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144
            I   T  ++ + K   +      +A+  K        +         A         + 
Sbjct: 64  NIRRETREILPYGKFYFSGIFGGGLAILSKWPIEESTMHAYPLNGRPSAIFRGDWYVGKG 123

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + I      ++D+           E   S  C   + QA  +   +    E    
Sbjct: 124 VACARIRIGPAAADIVDVFCTHLHAPYEREPRDSYIC-HRTAQAWEIAKLMKAAAEKGHL 182

Query: 205 FVIAGDFNRKI--------NYLGNNDDFWKTIDPNDSL---------------------- 234
            V  GDFN                  D W  + P+ S+                      
Sbjct: 183 VVGLGDFNMLPQSFAHRLITSHAPVKDVWGHLHPDSSIGAAIDSAEMSRKKPVPSADFNI 242

Query: 235 --IRFPKEKDSRCNANKNLRNKI-------------------PIDYFVMDQNAYKFLIQE 273
                  +           + K                     +DY  +   ++      
Sbjct: 243 SENGATCDSILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNFSSL 302

Query: 274 SFSEILYNEDDIKSRGKR----LSDHCPISIDY 302
              +I      +  R       LSDH  +    
Sbjct: 303 RKWDIESARVCMLERHPHLHCSLSDHFGVEATI 335


>gi|253746967|gb|EET01931.1| Endonuclease/Exonuclease/phosphatase [Giardia intestinalis ATCC
           50581]
          Length = 322

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 73/283 (25%), Gaps = 55/283 (19%)

Query: 57  LRQYAKNLDADIVFLQEMG-SYNAVAKVF-------PKNTWCIFYSTERLINHSKRDSNN 108
           L+ +  + D DI+   E     +A A+         P+          R           
Sbjct: 57  LKSFIHSKDPDIICFSETKLGSSAFAEFMEKEAVINPETGVHTVIKGYRHAFCCSTARQG 116

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
              TAI V++    +   +       DS  R          + I+     ++ +++ +  
Sbjct: 117 YASTAIFVKESIPVLSLCTQMGEPEFDSEGRF---------LHISLPTFELIHVYVPNSG 167

Query: 169 FLDSLE----NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------- 217
              +           +     +  + +  +I     +    V  GD N   N        
Sbjct: 168 RGSTGRPFTSENKPANLPTRIKYEELIFKYIGDLIAAGKDVVYCGDLNVAHNEIDLYNPR 227

Query: 218 ---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--------IPIDYF 260
                          F K +D +  +  F          +                IDYF
Sbjct: 228 NNHFSPGFTDEERSAFSKLLDDHGLIDVFRTMHPQLVKFSWFSNFGRARQHKHGWRIDYF 287

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           V+    +K +   +                  SDH PI +   
Sbjct: 288 VVTYEIFKRVTMVNI----------LDDHNTYSDHVPIIMRLT 320


>gi|145259030|ref|XP_001402248.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           niger CBS 513.88]
 gi|134074865|emb|CAK38977.1| unnamed protein product [Aspergillus niger]
          Length = 298

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 81/294 (27%), Gaps = 23/294 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        +    R       L QY        + LQE+        
Sbjct: 8   PLRILTHNIRY-ATSSPFKGERPWADRVQLLLNEL-QYNTRHAEGFICLQEVLHNQLGDI 65

Query: 83  VFPKN------TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +   N       W            +   S      +I   +    V     P   +K S
Sbjct: 66  LTGLNASKQNKAWDYIGVGRDDGCKAGEYSPILYQPSIWQLRHCETVWLSETPGTPSK-S 124

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  A  R     +      +  +L ++       D    +   +  ++ ++ Q  +    
Sbjct: 125 WDAASIRIVTIGVFTHRASRKTILAMNTHL---DDQGSRSRLEAAHIILRKLQEYRTG-K 180

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLR--- 252
                +    + GDFN + +               D+     P+E               
Sbjct: 181 AFGPIISGMFLTGDFNSQEDQEAYTVLTAPESPLADAAKLVNPQEHYGNQKTWTGFGHEG 240

Query: 253 -NKIPIDYFVMDQNAYKFLIQES----FSEILYNEDDIKSRGKRLSDHCPISID 301
            +   IDY ++ ++    ++         E      +    G   SDH  + ID
Sbjct: 241 QDPTRIDYVLL-ESTADKVLSHGRQPWAVEGYAVLANRFDDGVFNSDHRAVVID 293


>gi|53717884|ref|YP_106870.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|67641509|ref|ZP_00440286.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|76810950|ref|YP_331843.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710b]
 gi|121598216|ref|YP_994254.1| hypothetical protein BMASAVP1_A2960 [Burkholderia mallei SAVP1]
 gi|124384970|ref|YP_001028092.1| hypothetical protein BMA10229_A2128 [Burkholderia mallei NCTC
           10229]
 gi|126442096|ref|YP_001057288.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 668]
 gi|126450081|ref|YP_001082902.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei NCTC 10247]
 gi|126454198|ref|YP_001064530.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134283629|ref|ZP_01770328.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 305]
 gi|167001495|ref|ZP_02267290.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei PRL-20]
 gi|167736660|ref|ZP_02409434.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 14]
 gi|167813758|ref|ZP_02445438.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 91]
 gi|167843867|ref|ZP_02469375.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei B7210]
 gi|167892369|ref|ZP_02479771.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 7894]
 gi|167900865|ref|ZP_02488070.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|217424902|ref|ZP_03456398.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 576]
 gi|226199751|ref|ZP_03795302.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237810425|ref|YP_002894876.1| endonuclease/exonuclease/phosphatase [Burkholderia pseudomallei
           MSHR346]
 gi|242317588|ref|ZP_04816604.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106b]
 gi|254174690|ref|ZP_04881351.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei ATCC 10399]
 gi|254182171|ref|ZP_04888768.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1655]
 gi|254188101|ref|ZP_04894613.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254196318|ref|ZP_04902742.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei S13]
 gi|254201867|ref|ZP_04908231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei FMH]
 gi|254207198|ref|ZP_04913549.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei JHU]
 gi|254260281|ref|ZP_04951335.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710a]
 gi|254295783|ref|ZP_04963240.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 406e]
 gi|254359702|ref|ZP_04975973.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei 2002721280]
 gi|52208298|emb|CAH34231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|76580403|gb|ABA49878.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710b]
 gi|121227026|gb|ABM49544.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
 gi|124292990|gb|ABN02259.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
 gi|126221589|gb|ABN85095.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 668]
 gi|126227840|gb|ABN91380.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106a]
 gi|126242951|gb|ABO06044.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei NCTC 10247]
 gi|134245038|gb|EBA45133.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 305]
 gi|147747761|gb|EDK54837.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei FMH]
 gi|147752740|gb|EDK59806.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei JHU]
 gi|148028916|gb|EDK86848.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei 2002721280]
 gi|157806316|gb|EDO83486.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 406e]
 gi|157935781|gb|EDO91451.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160695735|gb|EDP85705.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei ATCC 10399]
 gi|169653061|gb|EDS85754.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei S13]
 gi|184212709|gb|EDU09752.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1655]
 gi|217391922|gb|EEC31948.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 576]
 gi|225928102|gb|EEH24138.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506100|gb|ACQ98418.1| endonuclease/exonuclease/phosphatase [Burkholderia pseudomallei
           MSHR346]
 gi|238522453|gb|EEP85897.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|242140827|gb|EES27229.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106b]
 gi|243062702|gb|EES44888.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei PRL-20]
 gi|254218970|gb|EET08354.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 270

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 77/306 (25%), Gaps = 66/306 (21%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +     VA ++  VSWN++      G + W             +R +  +  AD+ FLQE
Sbjct: 9   LAEPLPVADEITAVSWNLHKGRSPLGFTAW-----------EAMRSWVASTHADVYFLQE 57

Query: 74  MGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             +                   V  ++      I  + +  I               A+ 
Sbjct: 58  AMARRMPRPVLAAGFGAPMAEPVDDIWHCQATEIARALDWQIALGPNVFKPSWRHGNAIL 117

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENT 176
             +   L   + +        R   R  +        G  + +L  HL            
Sbjct: 118 SPHPLDLGGRWDISA-----HRFERRGLLVARATLAGGAPVTLLCAHLALT--------- 163

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                +   +Q  W+  WI +   +  P V+AGDFN   N           +     L  
Sbjct: 164 ----RAARLRQMHWIAHWIERNARTG-PLVLAGDFNDWRNDSIP-------LFGEIGLSE 211

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                             + +D   +                             LSDH 
Sbjct: 212 VATLLGESGRTFPAFSPALALDKMFVRGMTPLEWRAPG------------DETAWLSDHL 259

Query: 297 PISIDY 302
           P     
Sbjct: 260 PYVARL 265


>gi|328867739|gb|EGG16121.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 558

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/331 (12%), Positives = 91/331 (27%), Gaps = 52/331 (15%)

Query: 22  QKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-N 78
             +R++ +NI     +  +      +          ++ +Y    + DIV LQE+    +
Sbjct: 227 DALRIIQFNIQADIYTHPQRYHYCPSYALYRPYRQYIIPEYILEHNGDIVCLQEVEVEFD 286

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-----------VRKKNVRVLQQS 127
            + KV  ++ +       +  +           T+               +K+  ++ + 
Sbjct: 287 RLRKVLIESGYNHTAVLAKETDRQHEQCITFYQTSRIQVIEEHLVNYNTIEKHPELISKE 346

Query: 128 YPLLGAKDSFSRAG------------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
                  ++                     + L  +   +K  V+++HL      +    
Sbjct: 347 QIASLTNNNVHNTNMYNQLLHTLHHNRHNILLLECKKTNQKFIVVNVHLYWGASSNDTNY 406

Query: 176 TYSPSCSLLSQQAQW-------LKDW--ITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
                   +             L  W  I    E+  P +I+GDFN              
Sbjct: 407 YLQILQMNMLLIMVQNILTRHKLGSWTTIDDNFETNTPIIISGDFNNGPANYTYRYLAKG 466

Query: 227 TIDPNDSLIRFPKEKDSRCNANK-------------NLRNKIPIDYFVMDQNAYKFLIQE 273
            ++ N +      +   +  +                   K  +D   ++      +  E
Sbjct: 467 NLNVNTNQGLVNYQHPFKFKSAYNLHPNGELKYTCITRDFKGCVDQIFVN----DKIKVE 522

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           S  E+     +        SDH  I+    F
Sbjct: 523 SLLEVEKYYGECLPTITEASDHILIASTITF 553


>gi|226942126|ref|YP_002797200.1| ExoA [Laribacter hongkongensis HLHK9]
 gi|226717053|gb|ACO76191.1| ExoA [Laribacter hongkongensis HLHK9]
          Length = 257

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 74/301 (24%), Gaps = 72/301 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+VS N+N +        +                +     AD+V +QE+ +  A     
Sbjct: 3   RIVSANLNGIRSATQKGFF---------------DWLATTGADVVCVQELKAQLA----- 42

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
             +      +       +   +    ++ + +  +           +   DS  R     
Sbjct: 43  --DLKPEHRTPAGFPFAAFHCAEKKGYSGVGLYARREPDRVVEGLGIDWIDSEGRY---- 96

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +  +   + V+ ++L S    +  +                L+            
Sbjct: 97  -----LRADFGTLSVISLYLPSGSSSEERQAVKFRFMDAFLPHLDALR-------TEGRD 144

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANKN 250
            V+ GD+N   N +   +      +                +      ++          
Sbjct: 145 IVLCGDWNIAHNEIDLKNWKGNLKNSGFLPEERAWIGARFAEGWADVWRQLYPEAPGYTW 204

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           IDY +                          +  R SDH P+ +D
Sbjct: 205 WSQRGQAYAKDVGWRIDYQIATAGLAARAQSAFV-----------YKDTRFSDHAPLVVD 253

Query: 302 Y 302
           Y
Sbjct: 254 Y 254


>gi|157864681|ref|XP_001681049.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68124343|emb|CAJ02199.1| inositol phosphosphingolipid phospholipase C-Like [Leishmania major
           strain Friedlin]
          Length = 653

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 79/307 (25%), Gaps = 63/307 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A+    +R++++N+  +             +   +   +     ++   D++ LQE 
Sbjct: 5   STFAAGELPIRVLTFNLWGIFN----------SRMREARMKVFATKIEHY--DVILLQEQ 52

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S      +F   +                 S      A+  R    +    ++PL G  
Sbjct: 53  FSVEDFDLIFQNASP---VVQRTYTFRRFCSSFYGSGCAVISRYPISQAFFHTFPLQGYP 109

Query: 135 D---------SFSRAGNRRAVELLVEING----KKIWVLDIHLKSFCFLDSL--ENTYSP 179
           +         +   A  R  V + +   G    +++ +   HL +     S         
Sbjct: 110 EMVLHGDFFANKGAAMVRVMVPVTMADGGAAKAQEVTLYTTHLVAVYEKVSQLSSWRRER 169

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------------- 220
                  QA    D+I        P +I GDFN     L                     
Sbjct: 170 YLPFRISQAISFADFIVSTSRPTDPIIIGGDFNCSQRSLEVQMMLILLKRYGYDMHSVLP 229

Query: 221 -----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNA 266
                 D      +       F     +  N+ K                ID+    + A
Sbjct: 230 PPRALRDAAAAEQEREVGQRFFTYSDRNTFNSMKTSYFKLLKLEADIPSQIDHMFFSRPA 289

Query: 267 YKFLIQE 273
           +  L   
Sbjct: 290 FALLQFA 296


>gi|255020174|ref|ZP_05292243.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756]
 gi|254970316|gb|EET27809.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756]
          Length = 253

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 74/305 (24%), Gaps = 77/305 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL SWN+N                        LR++      D++ +QE      +A++
Sbjct: 1   MRLYSWNVNG---------------WRAVTRHGLREWVAATPMDVLCVQETKVQ--LAQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P       + +               ++ +A   ++     ++       D+  R    
Sbjct: 44  DPDEAQLPGFHSLWAEAE------RPGYSGVATFFRDPCTAVRAQLGRADFDAEGR---- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V  +     + +++  +               +   +Q   L            
Sbjct: 94  -----VVVTDCGDFDLYNVYFPNGKKDAQRLAFKLDFYAFFLEQVTALVRR-------GR 141

Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             +  GD N                             +        I   +        
Sbjct: 142 SVIFCGDVNTAHTPLDLARPEANRRVSGFLPEERAWLDRW--REAGFIDSFRHFHPEERR 199

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +           +DYF + ++    L     +  +              DHCP+
Sbjct: 200 YSWWSLRSGARERDVGWRLDYFWVHESLLPRLKGAGIATEVRGA-----------DHCPV 248

Query: 299 SIDYD 303
            ++ D
Sbjct: 249 WLELD 253


>gi|321262100|ref|XP_003195769.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus gattii
           WM276]
 gi|317462243|gb|ADV23982.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus
           gattii WM276]
          Length = 651

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/298 (10%), Positives = 67/298 (22%), Gaps = 59/298 (19%)

Query: 53  DYTLLRQYAKNLDADIVFLQE---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
               +      LDA I+  QE   + +    +   P      +        +S   +  D
Sbjct: 2   KKKNIEGLLDELDAQIICFQEHKTVRTRLEKSMACPGPYDGFWTFPRSKTGYSGVCTYVD 61

Query: 110 IHTAIAVR----------------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
               + ++                 K      +        D           +  V+  
Sbjct: 62  SRYCVPLKAEEGITGLLLGDRLSTMKPPWTDVERIGSYPVVDDMDWMDELDGTKFDVKKL 121

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSL--LSQQAQWLKDWITQKKESLVPFVIAGDF 211
             +   +      F   +      +              L++ +   + +    +I GD 
Sbjct: 122 DMEGRAVVCDFGLFVLFNLYCPNETNDARRPYKMNYLHALQERVHLLQAAGREVIIVGDI 181

Query: 212 NR-----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDS------RCNA- 247
           N                  +               P   ++   +E          C   
Sbjct: 182 NIVRQPMDSGEGPVRSSAEQHYSHPARRILDNWCAPKGPMVDVIRESWPQRDDMFTCWNQ 241

Query: 248 ---NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ++      IDY +       ++        +Y            SDHCP+ +D 
Sbjct: 242 KLDARSANYGSRIDYVLCTHGLRPWIKGGDILSKVY-----------GSDHCPVYVDL 288


>gi|115440517|ref|NP_001044538.1| Os01g0801100 [Oryza sativa Japonica Group]
 gi|113534069|dbj|BAF06452.1| Os01g0801100 [Oryza sativa Japonica Group]
          Length = 310

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 92/302 (30%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWNIN L   + V+    S           R  A+  + D++ LQE         +
Sbjct: 54  MKILSWNINGL--HDVVTTKGFSA----------RDLAQRENFDVLCLQE-------THL 94

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K+            ++     +   ++  AV  +   +  Q    +   D   R    
Sbjct: 95  EEKDVEKFKNLIADYDSYWSCSVSRLGYSGTAVISRVKPISVQYGIGIREHDHEGR---- 150

Query: 144 RAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                ++ +     ++++ ++ +   FL  L    +      S   + L+          
Sbjct: 151 -----VITLEFDGFYLVNAYVPNSGRFLRRLNYRVNNWDPCFSNYVKILEK--------S 197

Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++AGD N     +  +                + ++T   +  L+   +++      
Sbjct: 198 KPVIVAGDLNCARQSIDIHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRKQHPNAVG 257

Query: 248 NKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +DYF+  ++    +            D         SDH PI +
Sbjct: 258 YTFWGENQRITNKGWRLDYFLASESITDKVH-----------DSYILPDVSFSDHSPIGL 306

Query: 301 DY 302
             
Sbjct: 307 VL 308


>gi|146329616|ref|YP_001209809.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A]
 gi|146233086|gb|ABQ14064.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A]
          Length = 258

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/303 (9%), Positives = 71/303 (23%), Gaps = 73/303 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             +++++N N +   +    +                +    + D V +QE  +     +
Sbjct: 2   SFKMITFNANGIRAAQRKGFF---------------DWLATQNPDAVCIQE--TKAQRHQ 44

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     +                     ++ +A+  K      +        D   R   
Sbjct: 45  LEDNPVFFPLAHNYYHDAQ------RKGYSGVALYLKKEPDQVRYGIGWADIDEEGRY-- 96

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +E     + ++ +++ S       +         L    + L         S 
Sbjct: 97  -------LEARYGDLSLISLYMHSGTSGAHRQEKKESFMVRLLPYLEELAQ-------SG 142

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPN-------DSLIRFPKEKDSRC-------NAN 248
              ++ GD N         +      +              F               +  
Sbjct: 143 RRVIVCGDINIAHCERDIKNWRGNIHNSGFLPHERQWLTDLFAGAYKDGFRLKNQNDHEY 202

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +           IDY ++  N    ++                R +  SDH P+ 
Sbjct: 203 TWWSQRGKARANNAGWRIDYQIVSNNLAADVLSAEI-----------YRAQNFSDHAPLI 251

Query: 300 IDY 302
           + Y
Sbjct: 252 LTY 254


>gi|322708233|gb|EFY99810.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           [Metarhizium anisopliae ARSEF 23]
          Length = 704

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/357 (12%), Positives = 96/357 (26%), Gaps = 76/357 (21%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +++++ SWN+  +  +  +       +        + +    +  DAD + LQE+ +   
Sbjct: 321 ERIKVFSWNVLCDKYATPQTYGYTPTNALNWEYRKSCILDELRLRDADFLSLQEVSTDAF 380

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGA-- 133
              + P+     +       + +K  S  D  T    A+  ++    +L +         
Sbjct: 381 KEDLSPELAQMDYKGVHWPKSRAKTMSEKDAQTVDGCAVFYKQSKFILLDKQLIEFATIA 440

Query: 134 ---------KDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDS-------- 172
                     D F+R   +  + ++      + G +I ++++HL     L          
Sbjct: 441 INRPDMKNQHDVFNRVMPKDNIAVICFFESRLTGARIILVNVHLTWDSALADVKVIQTGI 500

Query: 173 ---------LENTYSPSCSLLSQQAQWLKDWITQKKE-------------SLVPFVIAGD 210
                     +    P+          L D     +              + +P ++ GD
Sbjct: 501 LMEHVTKLAEKYARWPAVRDKKMITVPLPDDAEAPEPQAEPGPSQEYRTNTDIPLLVCGD 560

Query: 211 FNRKINYLGN------------------------NDDFWKTIDPNDSLIRFPKEKDSRCN 246
           FN                                 D         D+     K  D    
Sbjct: 561 FNSTEGSSVYDLMSMGRVPPDHLELTSYQYGSFTRDGIEHPFSLRDAYAHTKKTADEMPF 620

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDY 302
            N        IDY     N  + +      +  Y             +DH  I  D+
Sbjct: 621 TNYTPGFADVIDYIWYSTNTLEVVELLGPPDAEYLKRMPAFPNWHFPADHIQIMADF 677


>gi|255011204|ref|ZP_05283330.1| putative exported phosphatase [Bacteroides fragilis 3_1_12]
 gi|313149015|ref|ZP_07811208.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137782|gb|EFR55142.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 313

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/341 (10%), Positives = 95/341 (27%), Gaps = 75/341 (21%)

Query: 2   IRKYVLALV----FFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           +++++  L+       V CT    +  ++++++SWN+      +                
Sbjct: 1   MKRFIYMLIASLAISFVSCTPVERAKEKELKVLSWNVWHAGHAKNYP---------EKGC 51

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                  K   AD++ + E  +Y A   V     +     ++                 +
Sbjct: 52  EGTIGILKKSQADVILMIE--TYGAAPMVADSLGYDYVLLSDN----------------L 93

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  +        +P   +  +F          + ++++G  + + D  L     +  + 
Sbjct: 94  CIYSRYPIKKTYLFPDSISTFNFGG--------VEIDMDGTPVRLFDTWLHYLPDMRLVP 145

Query: 175 NTYSPSCS-------LLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFW 225
              S +             + + +   +          P ++ GDFN   +    +    
Sbjct: 146 TEQSEADILAWDDAGTRDDEIRRILSVLQPMIRQTDSIPMIMGGDFNVHSHLDWTDTTKD 205

Query: 226 KTIDPNDSLIRF--------------------PKEKDSRCNANKNLRNK---IPIDYFVM 262
                   +                       P++         N         ID+   
Sbjct: 206 MYSHGGAVVEWTVSKEMQNAGFKDSFREIHPQPEKNIGATWIYDNEDKPVRSDRIDFIYY 265

Query: 263 DQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDY 302
                + +  ES+++ L    + +  +    SDH  +   +
Sbjct: 266 QGKTIRAVTSESYNQELTKPLEFMGEKFFYPSDHGFVLTTF 306


>gi|2393783|gb|AAD11456.1| AP-endonuclease [Trypanosoma cruzi]
          Length = 405

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 79/318 (24%), Gaps = 67/318 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80
           ++ ++WN+  L                  D   +++  +    D + LQE          
Sbjct: 106 LKFITWNVAGLRGL------------LRKDDQAIQRLLEEEGPDALCLQETKLNPDDPQN 153

Query: 81  AKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            K+     +       R    +S   +      A   +   V+             S   
Sbjct: 154 EKLGEVPGYRFVDHVCRAKKGYSGTRTYIKNTAAAEWKTVTVKGFDTLKSPQDVGHSEGD 213

Query: 140 AGNRRAVELLVEINGK-----KIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
              R  +       GK      + +++ ++ +    L+ L          + Q    L  
Sbjct: 214 EEGR-VLTTYFGTQGKGSETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCTLGR 272

Query: 194 WITQKKESLVP-----FVIAGDFNR-------------------KINYLGNNDDFWKTID 229
                KE         F+ AGD N                              F +T+ 
Sbjct: 273 SCNHDKEEGDAPSLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLR 332

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
             +++  F                +           +DYFV+     + ++         
Sbjct: 333 VANAVDTFRALYPKAAPVYTFWSARINGRARGLGWRLDYFVVSAALARHVVDC------- 385

Query: 281 NEDDIKSRGKRLSDHCPI 298
                       SDHCP+
Sbjct: 386 ----FTMPHVMGSDHCPL 399


>gi|121674807|ref|NP_849185.2| CCR4-NOT transcription complex subunit 6-like isoform 2 [Mus
           musculus]
 gi|166216090|sp|Q8VEG6|CNO6L_MOUSE RecName: Full=CCR4-NOT transcription complex subunit 6-like
          Length = 555

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/345 (11%), Positives = 90/345 (26%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 186 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ 245

Query: 79  AVAKVFPKNT---WCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +  F+S          +   +               V+K  V   Q 
Sbjct: 246 YFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 305

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 306 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP 365

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 366 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 425

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 426 GGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 485

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 486 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 530


>gi|294566523|gb|ADF18552.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 977

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 76/295 (25%), Gaps = 61/295 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R+ +WN+ +L              +       + +  K L  DI+ + +        
Sbjct: 28  KTLRIGTWNVRSL--------------KQDGKLPNVIKEIKRLHVDILGISDTK------ 67

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             +P            L               I + K+  + +    PL           
Sbjct: 68  --WPDQGTNFVSDDYVLYYSGGDQRLERYGVGILLTKEISKSVINFVPLSN--------- 116

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             RA+ + +E     I ++ ++  +             +   L            +  ++
Sbjct: 117 --RAMLITLEAKPFNINIVQVYAPTGDKPVGQIEDLYRAIDTLL-----------KSTKN 163

Query: 202 LVPFVIAGDFNRKINYL---------------GNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               ++ GD N K+                     D   +    N+ +I     K     
Sbjct: 164 HELVIVMGDMNAKVGSTITPGVTGAYGLGNRNDRGDTLIEFCQDNNLIIANTFFKLPPRR 223

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     +D   +       +I   +   +             SDH P+ +D
Sbjct: 224 LYTWTSPMHTVDRV-VRNQIDYVMINRRYRNCIKKAQTYPGADIG-SDHNPVVVD 276


>gi|290990087|ref|XP_002677668.1| predicted protein [Naegleria gruberi]
 gi|284091277|gb|EFC44924.1| predicted protein [Naegleria gruberi]
          Length = 447

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 64/230 (27%), Gaps = 30/230 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           AL+   +     V  ++ +++++I   S  +G+  W+N           +       +AD
Sbjct: 91  ALIDESLESQTEVPNEITVMNFSIRRDSVFDGMDQWRNRK-------DAVANIILESNAD 143

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-----NNDIHTAIAVRKKNVR 122
           I+ +Q+   +  +  +F         S        +  +      +  +  I      + 
Sbjct: 144 IICIQDALQHQILD-LFTMLNEKQERSQYLWFGLGQSFNQNTNEYSGEYVTIFYNTDKIE 202

Query: 123 VLQ------QSYPLLGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDS 172
           +L          P       +     R              G    V + H       D 
Sbjct: 203 LLDQGCFWYSYTPSTKGSRGWDSVAPRLCTWCKFRNVKVKKGNSFHVFNTHW------DI 256

Query: 173 LENTYSPSCSLLSQQAQWL-KDWITQKKESLVPFVIAGDFNRKINYLGNN 221
                  S  L+ +  + L             P ++ G+ N   +    +
Sbjct: 257 GVEARRNSAYLIREYIENLCCQREEDNTIHTRPCIVMGNLNALPDSNAIH 306



 Score = 35.7 bits (80), Expect = 8.9,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 15/45 (33%), Gaps = 6/45 (13%)

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           DY  +  N         F  I   +   ++  +  SDH PI    
Sbjct: 407 DYIFVSPNVKVL----DFKVIT--DIKCQTTQRNASDHLPIMAAL 445


>gi|187933196|ref|YP_001884567.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B str. Eklund 17B]
 gi|187721349|gb|ACD22570.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B str. Eklund 17B]
          Length = 262

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 72/268 (26%), Gaps = 40/268 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVA-----------KVFPKNTWCIFYSTERLIN 100
                L +     + D + LQE+                   V  K     + +      
Sbjct: 18  DKIKYLAKIISEKNYDAIALQEISQSIEAKVINNNLKVDNFAVLLKAELDKYNTNYNFFW 77

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
                        +AV  K+  V ++S+ +    D       R+ V++  E N + I + 
Sbjct: 78  DFSHIGYGKYEEGLAVFTKHNIVNEKSFFISKGTDREYWK-TRKIVQVTFEYNNENIDLY 136

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
             HL            +         Q + L +    +  S       GDFN        
Sbjct: 137 SCHLGW----------WEDEEEPFKYQVKRLLE----ENTSNNITFFMGDFNNNAFVRNE 182

Query: 221 NDDFWKTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
             D+       D+     +           +     ++K+ +D  + ++           
Sbjct: 183 GYDYLVNKGLVDTFNISKEADNGITVKGNIDGWDENKDKLRLDLILSNKKL--------- 233

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
             I        +    +SDH  + I  +
Sbjct: 234 DVITSKVIFNGTNKDVISDHYGVEISLN 261


>gi|110677885|ref|YP_680892.1| hypothetical protein RD1_0499 [Roseobacter denitrificans OCh 114]
 gi|109454001|gb|ABG30206.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 253

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 74/307 (24%), Gaps = 76/307 (24%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T S  + +R++SWN+   +                 D   + +    L+ DI  LQE   
Sbjct: 2   TGSEKKPLRVLSWNVFNENP----------------DPARIAEALATLNPDIALLQEAL- 44

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                            ++   ++ ++  +       + +  +     + +         
Sbjct: 45  ---------PAHIDEIKASFPHVSVARDYALKGELCHLVIASRFPTRRETTLFHADTSKP 95

Query: 137 FSRAGNRRAVELLVE---------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 R A  +               +   V+++H  +       +   + +       
Sbjct: 96  APTRWARHAGWVEFLDSLSVDVVVPGTRPFRVVNLHTSAGVSPSVRQAELAETQRHF--- 152

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRK-----------INYLGNNDDFWKTIDPNDSLIR 236
                       +   P ++AGDFN               +    D          +   
Sbjct: 153 ------------DHEGPCLVAGDFNSYAVPWLAPLLAIPLHYRPKDWLI-FERRALNAWF 199

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             +      +     + ++ +D                        +         SDH 
Sbjct: 200 RRRGFAPALHGVTFPKFRLQMDQVFTRD----------IMVETAAIERRL----WGSDHR 245

Query: 297 PISIDYD 303
           PI +D  
Sbjct: 246 PILLDIS 252


>gi|154707400|ref|YP_001425116.1| exodeoxyribonuclease III [Coxiella burnetii Dugway 5J108-111]
 gi|154356686|gb|ABS78148.1| exodeoxyribonuclease III [Coxiella burnetii Dugway 5J108-111]
          Length = 259

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 83/307 (27%), Gaps = 80/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +R+++ N+N +        +                + K   ADIV LQE  +   +   
Sbjct: 1   MRIITLNLNGIRAAARRWFF---------------DWLKRQKADIVCLQETKACLEITNG 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    +  +Y       +S           I  R+K  RV  +           +   
Sbjct: 46  DQFHPKGYHCYYHDAEKSGYSG--------VGIYCREKPDRVTTR------LGWEHADKE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      ++ +   + V  +++ S    +  +        +           +     S
Sbjct: 92  GRY-----IQADFGSLSVASLYMPSGTTGEHRQ-------KIKFDFMDRYMKRLKNIVHS 139

Query: 202 LVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              F+I GD+N                             +       +  F        
Sbjct: 140 KRSFIICGDWNIVHKEIDIKNFKSNQKHSGCLPEERAWLDEVFTKVGLVDAFRVVNQKP- 198

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +      ++           IDY V+  +    +  E              + KR SDH 
Sbjct: 199 DQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSERI-----------YKDKRFSDHA 247

Query: 297 PISIDYD 303
           P+ IDY+
Sbjct: 248 PLIIDYE 254


>gi|241766798|ref|ZP_04764623.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN]
 gi|241362815|gb|EER58576.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN]
          Length = 271

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/278 (9%), Positives = 74/278 (26%), Gaps = 62/278 (22%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           + ++      D + +QE+ +  A   +  +                   +    ++ + +
Sbjct: 24  VERWIAATRPDCICVQEVKAQAA--DIATRFEQLAGLQGH------FHFAQKKGYSGVGI 75

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             ++      +       D+  R      +EL  +   +K+ ++  +  S    +  +  
Sbjct: 76  YTRHEPSDVIAGYGSPEFDAEGRY-----IELRFDTPARKLSIISAYFPSGSSGEERQLA 130

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                                  +    F++ GD N                        
Sbjct: 131 KYRFLEAFHPHLMA--------TKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPEE 182

Query: 221 NDDFWKTID----PNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVMDQNA 266
                K +         +  + + + +  +       N+           +DY       
Sbjct: 183 RAWMTKLLHTTDPGGGLVDVYRQLQPTATDTAYTWWSNRGQAYANNVGWRLDY------- 235

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  + +       +   + ++ SDH PI++DY+F
Sbjct: 236 ----HLATPALAALARAEHIYKDEKFSDHAPITVDYEF 269


>gi|77361319|ref|YP_340894.1| hypothetical protein PSHAa2403 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876230|emb|CAI87452.1| putative membrane protein [Pseudoalteromonas haloplanktis TAC125]
          Length = 358

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 70/290 (24%), Gaps = 61/290 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +  +A  VR++S N+   +                     L         D++   E 
Sbjct: 91  SASKHIAHSVRIMSANVLMSNHNS----------------EQLISLVDQHQPDLLITLES 134

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S+        K  +  +                D    + +  K      Q   L+   
Sbjct: 135 DSWWQNKLSVLKKDYPYYIE-----------CPKDNRYGMHLYSKFKIFDAQICQLIEDD 183

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                     A  + ++ +          +       + E++  P  S L   A+ L   
Sbjct: 184 IPSIHILFASAQGVKMQAH---------FIHPAPPSPTEEDSSRPRDSELIMVAKAL--- 231

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
               K    P ++AGD N              +      L                   +
Sbjct: 232 ----KNPTRPTIVAGDLNDVAWSRSTRLFMQIS----GLLDPRKGRGFYNTFHASYFFMR 283

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            P+D+    +               +    IK   K  SDH  +  +  F
Sbjct: 284 WPLDHLFHSEG--------------FKVKRIKRLAKYGSDHFALLTELTF 319


>gi|154484494|ref|ZP_02026942.1| hypothetical protein EUBVEN_02208 [Eubacterium ventriosum ATCC
           27560]
 gi|149734342|gb|EDM50259.1| hypothetical protein EUBVEN_02208 [Eubacterium ventriosum ATCC
           27560]
          Length = 364

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 102/325 (31%), Gaps = 63/325 (19%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           S  ++   +++NI               G S W  S K   S      +  K+ + D   
Sbjct: 59  STGKEYSALTYNIGFGAYTPDFSFFMDGGKSSWAKSKKSVISTVNGAGELVKSYNPDFAL 118

Query: 71  LQEMGSYNAVAKVFPKN--------TWCIFYSTERLIN---HSKRDSNNDIHTAIAVRKK 119
           ++E+   +  +    +          +   ++         +     +    + +A+  K
Sbjct: 119 IEEVDLNSTRSYHVNEYSLLKNVMKDYDCVFAQNYDSAFLFYPFTQPHGSSKSGLALFSK 178

Query: 120 NVRVLQ--QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                   +S+P+  +   F       ++  +   NGK++ + ++H+ ++   D      
Sbjct: 179 YSITDSLRRSFPVSTSFSKFFDLDRCYSISRVPVDNGKELVIFELHMSAYGNSDE----- 233

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN---YLGNNDDFWK-------- 226
                +   Q   L   + ++ ++    +  GDFN  +        N + W         
Sbjct: 234 -----IREGQINMLVSDLEKEYKAGNYVLCGGDFNHDLKASEDDSENRESWAYPFPRKKL 288

Query: 227 ---------TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                     +   +    +   +++       +   + +D F++  N            
Sbjct: 289 PSNFSFCIDQLSDEEKDNLWNSARNADMEYKPGVTYTVTLDGFIISDN------------ 336

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
           I   + D  + G   SDH P+ + +
Sbjct: 337 IECVKYDNINTGYTYSDHDPVYVKF 361


>gi|331241043|ref|XP_003333171.1| hypothetical protein PGTG_14718 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309312161|gb|EFP88752.1| hypothetical protein PGTG_14718 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 358

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 87/294 (29%), Gaps = 56/294 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R+ +WN+  ++  E                  L+ Y    D D++ L E        
Sbjct: 104 DTLRISAWNVCGINACEKKG---------------LKTYLAAEDPDVIILSETK------ 142

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +    I +   +             +  +A+  K+  +    Y L  A D  S  G
Sbjct: 143 ---MQAEPDIMHIKHQFRYRYWGGDETKGYAGVAILSKHKPIEVV-YGLPTATDQSSTKG 198

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                  +V +   K +++  +  +        +      +   +  + L     +    
Sbjct: 199 R------IVTLEFSKFFLIGTYTPNAGDNLKFMDRKKEWNAAFEKYLRELDA--KKPVVW 250

Query: 202 LVPFVIAGDFNRKINYLGNN-DDFWKTIDP-----NDSLIRFPKEKDSRCNANKNLRNK- 254
                 A ++N+   Y     D     + P     ++ L+   +E +     +   R   
Sbjct: 251 GDIRNAASNWNKTAGYTQEECDGLNSQLSPPQDSGHEKLVDVWRELNPDLEGHYTYRFGC 310

Query: 255 ------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   ID F++ Q  ++ +      +  Y            SDH PI I+ 
Sbjct: 311 REKGIGWRIDAFIVSQRVFESVKTCEIRQECY----------GASDHVPIVIEI 354


>gi|124806639|ref|XP_001350780.1| sphingomyelin phosphodiesterase, putative [Plasmodium falciparum
           3D7]
 gi|18157556|gb|AAL62029.1|AF323591_1 sphingomyelin/lysocholinephospholipid-phospholipase C [Plasmodium
           falciparum]
 gi|23496908|gb|AAN36460.1| sphingomyelin phosphodiesterase, putative [Plasmodium falciparum
           3D7]
 gi|26986098|emb|CAC81929.1| putative sphingomyelinase [Plasmodium falciparum]
          Length = 393

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 66/230 (28%), Gaps = 40/230 (17%)

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
            KR   + ++  + V  K+  + + +      K       ++ A+ L  ++  KK+ V+ 
Sbjct: 171 GKRKFFHFVNGGVIVLSKHKILHKHALIYSSGKFPDV-FCSKGAIYLKCDVMNKKVNVVA 229

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-----VPFVIAGDFNRKIN 216
            HL++                   +Q   L  W+ +   S            GDFN + N
Sbjct: 230 THLQAG--------DNKEQQKCRWKQIDELSKWVYEGIPSTFIKKFESLFFVGDFNIRYN 281

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI------------DYFVMDQ 264
                    K +  N       K+       +        I            DY ++  
Sbjct: 282 AD--RLFLDKVLSDNYLNSYVTKKSLDTTYDSFLNDYCRYIERDYNYKHKYTLDYILVAN 339

Query: 265 NAYKFLIQESFSEILY------------NEDDIKSRGKRLSDHCPISIDY 302
           N+   +I    S   Y                  +     SDH PI   +
Sbjct: 340 NSNVEIIVPQTSIQNYYKSLYFIKFFLGIIPYKTTYIHHPSDHFPIYATF 389



 Score = 39.9 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 10/129 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79
           K+ ++S+NI  LS    V L   +  R  +    +       D DI+ L E+ +      
Sbjct: 11  KLTIMSYNIQMLSIPFSVHLNSWT--RRNAIIDYICSLDDIYDIDILVLNEVFTKKCYKL 68

Query: 80  -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + + FP +T  I  + +R  N++   S+      ++    +  +  +S   +   
Sbjct: 69  LTSGKIKEKFPYHTNVIGRNYKRHDNYNDSSSSTGQKDGLSFHSSDTNINIESSRGISNY 128

Query: 135 DSFSRAGNR 143
            S      R
Sbjct: 129 VSEQMEYIR 137


>gi|315606008|ref|ZP_07881039.1| endonuclease/exonuclease/phosphatase [Actinomyces sp. oral taxon
           180 str. F0310]
 gi|315312290|gb|EFU60376.1| endonuclease/exonuclease/phosphatase [Actinomyces sp. oral taxon
           180 str. F0310]
          Length = 475

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/376 (10%), Positives = 96/376 (25%), Gaps = 92/376 (24%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--G 75
           ++    + + ++N  +L+      L  +      +  + + +  + ++ DI+ + E    
Sbjct: 38  SATTDALTVATFN-ASLNRDSPGQLLDDLATSGNTQASNVAETIQRVNPDIILINEFDYD 96

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSK-----------------------------RDS 106
           + +A   +F  N   + ++  + + +                                  
Sbjct: 97  ANSAAVDLFRTNYLEVPHNGAQPVTYPYSWAGSVNTGVPSGFDLDGDGSTSGPSDAWGFG 156

Query: 107 NNDIHTAIAVRKKNVRVLQQ-----------------SYPLLGAKDSFSRAGNRRAV--- 146
                    V  K      Q                      G+         R  +   
Sbjct: 157 KFPGQYGFVVYSKYPIKTDQIRTFQNFLWKDMPGALLPTNADGSGWYSDEILQRFPLSSK 216

Query: 147 ---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-- 201
              +L V+++G  + VL  H     F    +     +   +   + ++ +      +   
Sbjct: 217 THADLPVDVDGTTVHVLAAHPTPPSFDGPEQRNKKRNFDEIRVWSDYVANRADYLYDDKG 276

Query: 202 -------LVPFVIAGDFNRKINYLGNNDDFW----------------------KTIDPND 232
                     FVI GD+N       +                             +    
Sbjct: 277 VKGGLSTDANFVILGDYNSDPLDGDSYPGAIDQLLTSPRIVDTMPTSQGGPSEAKLQGGA 336

Query: 233 SLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +L      K    + N + R     IDY +   N    + +        +++  +  G  
Sbjct: 337 NLKHKTDPKYDTGDFNDDPRPGNLRIDYVL--PNTGTQVDEAQVFWPTRDDELFRLTGLH 394

Query: 292 L---SDHCPISIDYDF 304
               SDH  +     F
Sbjct: 395 PFPTSDHRMVWTKLRF 410


>gi|294620081|ref|ZP_06699434.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1679]
 gi|291593678|gb|EFF25199.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1679]
          Length = 277

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 82/310 (26%), Gaps = 66/310 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ ++ N +  L  +                   L       D +++ LQE+       +
Sbjct: 1   MKFMTLNTHSWLEPEP------------EKKLQELADKILLEDYEVIALQEINQLLESEE 48

Query: 83  VFPKNTWCI------------------------FYSTERLINHSKRDSNNDIHTAIAVRK 118
           V P                                              +      A+  
Sbjct: 49  VEPAKLMKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLA 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K    L+     +           R+ +    +I+ + I+V   H   +    S      
Sbjct: 109 KK--TLESQVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFY--- 163

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   + + L+++     E+ VP    GDFN  ++  G        +   DS +   
Sbjct: 164 -------FEWKNLENY---FLETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVAN 213

Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +E  +       +  +    K+ ID+  +          E      Y           +S
Sbjct: 214 EEGKAATVEKKIDGWEQNTEKLRIDFIFV---------PEGMQVKKYQRIFDGIDSPIIS 264

Query: 294 DHCPISIDYD 303
           DH  + I+ D
Sbjct: 265 DHYGVEIELD 274


>gi|254387858|ref|ZP_05003096.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|294818102|ref|ZP_06776744.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
           ATCC 27064]
 gi|326446788|ref|ZP_08221522.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197701583|gb|EDY47395.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|294322917|gb|EFG05052.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 581

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 92/320 (28%), Gaps = 68/320 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               + A  +R +S+NI             ++    T+    +         D+V LQE+
Sbjct: 29  TVNPASAPVLRFLSYNI-----CGNWEACSSTADEVTNRVQKVYDETMAWKTDVVLLQEV 83

Query: 75  GSYNA--VAKVFPKNTWCIFYSTERLINHSKRD---------SNNDIHTAIAVRKKNVRV 123
                  + +      +   ++  +                 +  +    +AV  K    
Sbjct: 84  CRTQFTRLEQKLGSQGYTGSFTVTQTPAGDTSQDLCKDDAVPNAVEGDYGLAVFTKGAIT 143

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
             Q   L    +  +       V+  ++  G+      +HL            YS + S+
Sbjct: 144 NHQVIDLATGLEKGTERWTTLCVDAPLQ--GRTTRSCSVHL------------YSDNTSV 189

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID-------------- 229
             QQA+ L        +  +P V+ GDFN + +    N      +D              
Sbjct: 190 AKQQAETLAVAANSWIDKGIPVVLGGDFNPRYSGGQANAPLSPVLDSFYSHSGGTGRFTE 249

Query: 230 -PNDSLIRFPKE------------KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                  RF                 +     K    +  +DY  + +N +K +  ++  
Sbjct: 250 ADETDTSRFTAACSSLNRPAGHCRSGAPTLMTKAPDPEAKLDYIFLSRNHFKNVAGDALP 309

Query: 277 EILYNEDDIKSRGKRLSDHC 296
           +I             +SDH 
Sbjct: 310 QISS-----------VSDHY 318


>gi|321469761|gb|EFX80740.1| hypothetical protein DAPPUDRAFT_318357 [Daphnia pulex]
          Length = 391

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 74/272 (27%), Gaps = 27/272 (9%)

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
              K   +    +  + +    D VFLQE+   +    +  +      YS          
Sbjct: 15  GVSKDRRTRIDAIGSHLQLGHYDFVFLQEVWVEDDFQAIVKQVGNIFPYSHYFHSGVIGG 74

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD---SFSRAGNRRAVELLVEINGKKIWVLD 161
                    I  + K + VL  ++ L G           G +      V  +G KI +  
Sbjct: 75  GI------CILSKAKIIDVLFHAWSLNGYIHKIQHGDWFGGKGVGLCTVVYHGMKINLYV 128

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            HL +              C+    QA     +I   +      ++ GD N +   L   
Sbjct: 129 THLHA-----EYNPASDEYCAHRVVQAFETSQFIRYTRNKADFCILGGDLNTEPENLAYR 183

Query: 222 DDFWKTIDPNDSLIR-------FPKEKDSRCNANK----NLRNKIPIDYFVMDQNAYKFL 270
                T   +  L            E  +             N   ID+ +      K L
Sbjct: 184 LICDHTSLKDLYLSTGKPEIEGMTSETPANSYTASESLRACPNGKRIDFVMCSS--RKGL 241

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             E+    +     I +     SDH  +   +
Sbjct: 242 QIETIDVNIPLPPRIPNYPFSYSDHEAVCAKF 273


>gi|50915043|ref|YP_061015.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394]
 gi|50904117|gb|AAT87832.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394]
          Length = 294

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 79/307 (25%), Gaps = 65/307 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++++ N +                 T      L ++      DI+ LQE+          
Sbjct: 25  KVLTLNTH-----------SWMQANTLKKLVALAEHILAEKYDIICLQEINQLIESELAT 73

Query: 85  PKNTWCIF----------------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +                                        +     +A+  K   
Sbjct: 74  DLPRYQALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPI 133

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L+ A    +    RR++     ++GK++ V+++HL  F               
Sbjct: 134 --HVSDILVSAMADETNYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKG------------ 179

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    +    +      P ++ GDFN   +  G        +D  DS         
Sbjct: 180 ----FLGEWEKLEKELLTLNCPLLLMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFG 235

Query: 243 SR---CNANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 + +    NK  +  D+    ++      + +F                +SDH  
Sbjct: 236 DHSIVADIDGWQGNKEALKVDHVFTSKDFIIRSSKTTFE---------GGDAPVVSDHYG 286

Query: 298 ISIDYDF 304
           + +   +
Sbjct: 287 LEVTLGW 293


>gi|126291655|ref|XP_001381153.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 6
           [Monodelphis domestica]
          Length = 557

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/344 (11%), Positives = 92/344 (26%), Gaps = 71/344 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 189 FSVMCYNVLCDKYATRQLYGYCPSWALTWEYRKKAIMQEILSCNADIISLQEVETEQYYS 248

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 249 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 308

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 309 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEY 368

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV-------PFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S V       P V+  D N   +          
Sbjct: 369 SDVKLVQTMMFLSEVKNIIDKASRSLKSNVLGEFGTIPLVLCADLNSLPDSGVVEYLSTG 428

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 429 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 488

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHC 296
            IDY            I          E++I         SDH 
Sbjct: 489 IIDYIFYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHF 532


>gi|227826512|ref|YP_002828291.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.14.25]
 gi|229583674|ref|YP_002842175.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.27]
 gi|227458307|gb|ACP36993.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.14.25]
 gi|228018723|gb|ACP54130.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.27]
          Length = 247

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 73/303 (24%), Gaps = 79/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VSWN+N +                 +    L  + +N   +++  QE         +
Sbjct: 1   MKIVSWNVNGIRA---------------ALKKNLIDFIENNMFEVIMFQETKG-----DI 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +   + Y                 ++ +    K   +       +   D   R    
Sbjct: 41  VPLDFIMMGYEVISFPAR------RKGYSGVMTLTKIKPINVIKGLQIKEFDDEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V +  K  +V++ +           +      + +      L+           
Sbjct: 91  -----TVTLELKDFYVINAYFPRAGDNLERLDFKLKFNNEIENFVLKLRK--------AK 137

Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           P ++ GDFN     +                   F   +      I   +          
Sbjct: 138 PVILCGDFNIAHQNIDGAFSDPTIPGLTPQERSWFSHFLSLG--FIDTFRYLHPNVRKYS 195

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +DY ++ +     +                    + SDH PI +
Sbjct: 196 WWSYMGKAREKNLGLRLDYCIVSEELKDRIKMADILI-----------DIQGSDHAPIIL 244

Query: 301 DYD 303
           +  
Sbjct: 245 ELT 247


>gi|21450299|ref|NP_659159.1| CCR4-NOT transcription complex subunit 6-like isoform 1 [Mus
           musculus]
 gi|157823321|ref|NP_001101825.1| CCR4-NOT transcription complex subunit 6-like [Rattus norvegicus]
 gi|17391192|gb|AAH18506.1| CCR4-NOT transcription complex, subunit 6-like [Mus musculus]
 gi|148688417|gb|EDL20364.1| CCR4-NOT transcription complex, subunit 6-like, isoform CRA_c [Mus
           musculus]
 gi|149046868|gb|EDL99642.1| CCR4-NOT transcription complex, subunit 6-like (predicted) [Rattus
           norvegicus]
          Length = 550

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/345 (11%), Positives = 90/345 (26%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 181 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ 240

Query: 79  AVAKVFPKNT---WCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +  F+S          +   +               V+K  V   Q 
Sbjct: 241 YFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 300

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 301 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP 360

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 361 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 420

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 421 GGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 480

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 481 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 525


>gi|55296320|dbj|BAD68138.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
           sativa Japonica Group]
 gi|55297697|dbj|BAD68287.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
           sativa Japonica Group]
          Length = 307

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 92/302 (30%), Gaps = 70/302 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWNIN L   + V+    S           R  A+  + D++ LQE         +
Sbjct: 51  MKILSWNINGL--HDVVTTKGFSA----------RDLAQRENFDVLCLQE-------THL 91

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K+            ++     +   ++  AV  +   +  Q    +   D   R    
Sbjct: 92  EEKDVEKFKNLIADYDSYWSCSVSRLGYSGTAVISRVKPISVQYGIGIREHDHEGR---- 147

Query: 144 RAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                ++ +     ++++ ++ +   FL  L    +      S   + L+          
Sbjct: 148 -----VITLEFDGFYLVNAYVPNSGRFLRRLNYRVNNWDPCFSNYVKILEK--------S 194

Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P ++AGD N     +  +                + ++T   +  L+   +++      
Sbjct: 195 KPVIVAGDLNCARQSIDIHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRKQHPNAVG 254

Query: 248 NKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +DYF+  ++    +            D         SDH PI +
Sbjct: 255 YTFWGENQRITNKGWRLDYFLASESITDKVH-----------DSYILPDVSFSDHSPIGL 303

Query: 301 DY 302
             
Sbjct: 304 VL 305


>gi|302535010|ref|ZP_07287352.1| predicted protein [Streptomyces sp. C]
 gi|302443905|gb|EFL15721.1| predicted protein [Streptomyces sp. C]
          Length = 342

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/283 (10%), Positives = 65/283 (22%), Gaps = 69/283 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + +V+ N++  +     +                 +      A ++ LQE+        
Sbjct: 128 DLTVVTHNVDDANPDPAGT----------------ARAVAASGAQLIALQELTPPA---- 167

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      + ER +  S           +                L   D       
Sbjct: 168 ---------LGAYERELAASHPHHVVRGTVGLWSTFP-----------LRDADGTPIVPW 207

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +    +     + V   HL S         T +   +  +  A+        ++   
Sbjct: 208 RLLLRATADTPKGPVTVYVAHLPSVRLGSGGFATGNRDEAARNLAARL-------REGPD 260

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYFV 261
              ++ GDFN                          +E  +    +   R     ID  +
Sbjct: 261 GRTLLVGDFNATTADSVLAPVT-------RDFTAAQEEAGAGFGLSWPARFPVARIDQIL 313

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +           S   +              SDH P++    +
Sbjct: 314 LRGGLA----PVSAWTLPAT----------ASDHLPVAASLRY 342


>gi|167766583|ref|ZP_02438636.1| hypothetical protein CLOSS21_01089 [Clostridium sp. SS2/1]
 gi|167711706|gb|EDS22285.1| hypothetical protein CLOSS21_01089 [Clostridium sp. SS2/1]
          Length = 371

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/318 (11%), Positives = 86/318 (27%), Gaps = 44/318 (13%)

Query: 17  TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           T +  ++   +++NI               G S W  S K             K+ D D 
Sbjct: 53  TLTTGKQYSAITYNIGFGAYTPDFSFFMDGGKSSWAKSKKSVLKTVKNAGNLTKSYDPDF 112

Query: 69  VFLQEMGSYNAVAKVFPKN--------TWCIFYSTERLIN---HSKRDSNNDIHTAIAVR 117
             ++E+   +  +    +          +   ++         +     +      +A+ 
Sbjct: 113 ALIEEVDLNSTRSYHVNEYSILKKCLKNYDTVFAQNYDSAFLFYPFTQPHGSSKAGLALF 172

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENT 176
            +          L  +          R   +  + ++  K  V+              + 
Sbjct: 173 SRYPIKDSLRRSLPISTSYNKFFDLDRCYSVSRIPVDNGKYLVIF---------QLHMSA 223

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI------NYLGNNDDFWKTIDP 230
           Y  S  +   Q + L   + ++ E+    +  GDFN  +      +        +     
Sbjct: 224 YGNSDKIRKGQIRMLSADMKKEYEAGNYVLCGGDFNHDLKAAEDDDSTDRESWAYPFPRK 283

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPID--YF---VMDQNAYKFLIQESFSEILYNEDDI 285
                            N    ++   D  Y            F+I ++    +Y   + 
Sbjct: 284 MLPEHFSFCMDQLPKKENLWNSSRNA-DMKYIPGKTYTVTLDGFIISDNVKCDMYKNINT 342

Query: 286 KSRGKRLSDHCPISIDYD 303
              G   SDH P+ + ++
Sbjct: 343 ---GYSYSDHDPVYVKFE 357


>gi|149412126|ref|XP_001505680.1| PREDICTED: similar to Chain A, Crystal Structure Of Human
           Rangap1-Ubc9 [Ornithorhynchus anatinus]
          Length = 565

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 94/351 (26%), Gaps = 71/351 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 197 FSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIMQEILSWNADIISLQEVETEQYYS 256

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 257 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKIEKFTLVQKHTVEFNQLAMA 316

Query: 138 SRAGNRRAVELLVEIN------------------------GKKIWVLDIHLKSFCFLDSL 173
           +  G+   +  ++  +                        G +  ++ +      +    
Sbjct: 317 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPQLGTEKQLILVANAHMHWDPEY 376

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV-------PFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +S         P V+  D N   +          
Sbjct: 377 SDVKLVQTMMFLSEVKNIIDKASRGLKSGSLGELGTIPLVLCADLNSLPDSGVVEYLSTG 436

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 437 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 496

Query: 256 PIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            IDY    +   N    L       ++ N           SDH  +    +
Sbjct: 497 IIDYIFYSKPQLNILGILGPLDPHWLMENNVSGCPHPLIPSDHFSLFAQLE 547


>gi|148688415|gb|EDL20362.1| CCR4-NOT transcription complex, subunit 6-like, isoform CRA_a [Mus
           musculus]
          Length = 568

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/345 (11%), Positives = 90/345 (26%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 199 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ 258

Query: 79  AVAKVFPKNT---WCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +  F+S          +   +               V+K  V   Q 
Sbjct: 259 YFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 318

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 319 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP 378

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 379 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 438

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 439 GGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 498

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 499 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 543


>gi|260584055|ref|ZP_05851803.1| endonuclease/exonuclease/phosphatase [Granulicatella elegans ATCC
           700633]
 gi|260158681|gb|EEW93749.1| endonuclease/exonuclease/phosphatase [Granulicatella elegans ATCC
           700633]
          Length = 362

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 93/317 (29%), Gaps = 48/317 (15%)

Query: 21  AQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            ++  + S+NI               G      + +    +   ++   + +  DI   Q
Sbjct: 58  GKEYTISSFNIGYGAYPQDYSFFMDGGKYSRAYNRETVLDNMQGIQNAIQMIQPDIALFQ 117

Query: 73  EMGSYNAVAKVFPK--------NTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNV 121
           E+ +    ++   +              +       +      + I    + +    K  
Sbjct: 118 EIDTDGDRSQHVDEVEFITQAFEKQNWVFGQNYDSPYLFYPILDPIGKATSGLLTMSKYT 177

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP 179
               Q Y L    +        RA  +      N K++ +++IHL ++    ++  +   
Sbjct: 178 IQSSQRYSLPIETNFNKFFDLDRAFTVSYLPVSNQKQLALINIHLSAYTKDPTIGKS--- 234

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                  Q + L  ++  + E     ++ GDFN  I    + + F  + +P      FP 
Sbjct: 235 -------QLEKLFHYMESEYEKGNYVIVGGDFNHDILLGKSPEVFQTSDEPQTWTHPFPV 287

Query: 240 EKDSRCNANKNLRNKI-------PID------YFVMDQNAYKFLIQESFSEILYNEDDIK 286
           E  S+                   +D         +        I     +  + +    
Sbjct: 288 ENLSKHFTLATQGLAQQKIPSARALDEGYQKGRTFVT--LVDGFIISDNVQFNHVQAHDL 345

Query: 287 SRGKRLSDHCPISIDYD 303
                 SDH P+S+ + 
Sbjct: 346 EFQH--SDHNPVSMSFT 360


>gi|332322171|emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 82/288 (28%), Gaps = 65/288 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI  L+ +                 + LR+     D   VF+QE    +   K   
Sbjct: 3   LISWNIRGLTARP--------------KRSSLRKMIFQHDPTFVFIQETKMDDITKKSV- 47

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                          + K D    I +  A     +  L        A    +R+    A
Sbjct: 48  -------------KTYWKADDVEWIFSPAAGNSGGIISLWNKSSFTMASTKIARSWM--A 92

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   +     +  +++++                       +A+  ++ +  +K +  P 
Sbjct: 93  ISGCLHEVNYECTLINVYNPCDVGE----------------RAEVWRELLEFQKNNPRPC 136

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----DSRCNANKNLRNKIP--IDY 259
           ++ GDFN  +N       ++      +                C      R      +D 
Sbjct: 137 LVIGDFNEVLNENERGSHYFSQTGSTNFKDFVQDSHLLEIPPACGGFTWFRGNSRSILDR 196

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI---DYDF 304
             ++                     +    + LSDHCP+ +   + D+
Sbjct: 197 LFVNPE----------WITNLPNLRVSLLQRGLSDHCPLLVHNKELDW 234


>gi|316977461|gb|EFV60557.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Trichinella spiralis]
          Length = 462

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/320 (10%), Positives = 84/320 (26%), Gaps = 72/320 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++ +WN+N L                      +++   +L  DI+ LQE  +      +
Sbjct: 1   MKITTWNVNGLRSIVD-----------------IQKTLLSLGCDIICLQETKLTYDTLDS 43

Query: 82  KVFPKNTWCIFYSTER-LINHSKRDSN----------NDIHTAIAVRKKNVRVLQQSYPL 130
            +   + +  +++  +    +S   +            +    +  + +     +Q   +
Sbjct: 44  SLALIDGFDSYFAFCQTRRGYSGVATYCKSDFSPDLVFNNFHDLYRQFQFAHPNRQHLGI 103

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               D+    G   A    +       ++  +++          +  +          + 
Sbjct: 104 FDNFDTLDNEGRMLATRHKLTNCNNAEYLFILNIYCPRVDPEQMDRQN----FRLAFLKL 159

Query: 191 LKDWITQKKESLVPFVIAGDFNRKI------------NYLGNNDDFWKTIDPND------ 232
           L+        S    +I GD N               +         + +   D      
Sbjct: 160 LQHCTECLLNSGNYVLILGDMNLCHKRIDHCDPDQEFDTDEARIWLCEFLYDTDKNADGK 219

Query: 233 -----SLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                 +    K +   C  ++           IDY + + +                  
Sbjct: 220 MVDLYRIHYPNKGRMFTCWNSQKRARILNFGTRIDYILANVDLIDRCSCCEIL------- 272

Query: 284 DIKSRGKRLSDHCPISIDYD 303
                  + SDHCP+  +  
Sbjct: 273 ----SSIQGSDHCPVMAELS 288


>gi|163867313|ref|YP_001608507.1| hypothetical protein Btr_0008 [Bartonella tribocorum CIP 105476]
 gi|161016954|emb|CAK00512.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 318

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 75/281 (26%), Gaps = 51/281 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + S+N++     + +                + +    L  DI+ LQE         
Sbjct: 78  DLTIASYNVHKCVGVDKIFNPT-----------RIVRVITELQVDILALQEADKRFGERI 126

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    +  +    +       A+  +   V          + +      
Sbjct: 127 GLINLQLLKAETGLIPVPLNTMSPHGHGWHGNALFLRKGYVRD------ILQVTLPSIEP 180

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A+ + +E+    I ++  H     +                +Q + L   +   K SL
Sbjct: 181 RGAIIVELEMEAGPIRIIAAHFGLLRYS-------------RKKQTKMLLTILQ--KRSL 225

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GDFN         +         +    +         +  +    + +D    
Sbjct: 226 MPTLLIGDFN---------EWRMGKGSSLNHFYPYFDSTLKVVPSFPSRFPFLALDRVFA 276

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +            +   E+      +  SDH PI    +
Sbjct: 277 FPH----------QLVTNLENHYSPLARIASDHLPIKAYLN 307


>gi|170769735|ref|ZP_02904188.1| cytolethal distending toxin B [Escherichia albertii TW07627]
 gi|52854784|gb|AAU88264.1| cytolethal distending toxin B [Shigella boydii]
 gi|52854791|gb|AAU88269.1| cytolethal distending toxin B [Escherichia albertii]
 gi|170121349|gb|EDS90280.1| cytolethal distending toxin B [Escherichia albertii TW07627]
          Length = 269

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 104/304 (34%), Gaps = 43/304 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++KY+++L+ FL     +     R+ +WN+   S         N           +RQ  
Sbjct: 1   MKKYIISLIVFLSFYAQADLTDFRVATWNLQGASATTESKWNIN-----------VRQLV 49

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              +A DI+ +QE GS  + A            +   + +          + +   R + 
Sbjct: 50  SGENAVDILAVQEAGSPPSTA----------VDTGRVIPSPGIPVRELIWNLSTNSRPQQ 99

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVEL----LVEINGKKIWVLDIHLKSFCFLDSLENT 176
           V +   +   LG + + +   NR+A E+     V   G+ +  + I   +F    ++   
Sbjct: 100 VYIYFSAVDALGGRVNLALVSNRQADEVFVLSPVRQGGRPLLGIRIGNDAFFTAHAIAAR 159

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + +  L+ +   + +D         + ++I GDFNR+   L  N             + 
Sbjct: 160 NNDAPELVEEVYSFFRDS-RDPVHQALNWMILGDFNREPADLEMN-----------LTVP 207

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                +    A     ++  +DY V                +         R +  SDH 
Sbjct: 208 VRNASEIIFPAAATQTSRRTLDYAVAGNAVAFRPFP-----LQAGIVYGARRTQISSDHY 262

Query: 297 PISI 300
           P+ +
Sbjct: 263 PVGV 266


>gi|308190072|ref|YP_003923003.1| hypothetical protein MFE_05240 [Mycoplasma fermentans JER]
 gi|307624814|gb|ADN69119.1| conserved hypothetical protein [Mycoplasma fermentans JER]
          Length = 647

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 89/338 (26%), Gaps = 69/338 (20%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77
              K+R+  WNI  L E                    L    ++L+ D++ L E  +   
Sbjct: 316 AKSKIRIGMWNILNLYETSEEYKKYG-----------LASVIEHLNLDVIGLIENKTKAS 364

Query: 78  -----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                  + K    N W +  S   + N  K    +  H   A   K  ++  + +    
Sbjct: 365 AQKFCEYLKKFTGNNNWELIASDNTIHNP-KLAPTSKQHECPAFIYKKDKIAIEKFINGK 423

Query: 133 AKDSFSRA------------GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTY 177
               +  +              R  + +  +  G        +  HL S     S E+  
Sbjct: 424 EWLGYDNSTFVVNEENNNLGYVRPPMGVKFKTLGPIQNNFTFVIDHLDSPGAAKSGESKS 483

Query: 178 SPSCSLLSQQAQW------LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           S      +Q+A        L DW  Q+       +  GD N K+        F + +   
Sbjct: 484 SLLSKQGAQEADEAYNLKNLMDWFDQQDGDNDDLIFMGDTNIKLGNQST--AFNEILKDQ 541

Query: 232 DSLIRFPK--EKDSRCNANKNLRNKIPIDYFVMD------------------QNAYKFLI 271
                     +  S  +     +   P D                        N  K   
Sbjct: 542 YYKALLTDSEQHKSSLSNQTWGKYSEPYDKIFTRTNLKYENANFFPLYDIFKDNILKDYQ 601

Query: 272 QESFSEILYNEDDIKSRG-------KRLSDHCPISIDY 302
                +   +    K+           +SDH PI  D 
Sbjct: 602 TIEEWKTYVDTIRKKTYNADFKYIFHAISDHSPIYFDL 639


>gi|317498993|ref|ZP_07957275.1| endonuclease/Exonuclease/phosphatase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316893742|gb|EFV15942.1| endonuclease/Exonuclease/phosphatase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 371

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 85/316 (26%), Gaps = 44/316 (13%)

Query: 19  SVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +  ++   +++NI               G S W  S K             K+ D D   
Sbjct: 55  TTGKQYSAITYNIGFGAYTPDFSFFMDGGKSSWAKSKKSVLKTVKNAGNLTKSYDPDFAL 114

Query: 71  LQEMGSYNAVAKVFPKN--------TWCIFYSTERLIN---HSKRDSNNDIHTAIAVRKK 119
           ++E+   +  +    +          +   ++         +     +      +A+  +
Sbjct: 115 IEEVDLNSTRSYHVNEYSILKKCLKNYDTVFAQNYDSAFLFYPFTQPHGSSKAGLALFSR 174

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                     L  +          R   +  + ++  K  V+              + Y 
Sbjct: 175 YPIKDSLRRSLPISTSYNKFFDLDRCYSVSRIPVDNGKYLVIF---------QLHMSAYG 225

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI------NYLGNNDDFWKTIDPND 232
            S  +   Q + L   + ++ E+    +  GDFN  +      +        +       
Sbjct: 226 NSDKIRKGQIRMLSADMKKEYEAGNYVLCGGDFNHDLKAAEDDDSTDRESWAYPFPRNML 285

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPID--YF---VMDQNAYKFLIQESFSEILYNEDDIKS 287
                          N    ++   D  Y            F+I ++    +Y   +   
Sbjct: 286 PEHFSFCMDQLPKKENLWNSSRNA-DMKYIPGKTYTVTLDGFIISDNVKCDMYKNINT-- 342

Query: 288 RGKRLSDHCPISIDYD 303
            G   SDH P+ + ++
Sbjct: 343 -GYSYSDHDPVYVKFE 357


>gi|255533657|ref|YP_003094029.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255346641|gb|ACU05967.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 635

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 62/287 (21%), Gaps = 57/287 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            + +++S+N+                +        +R        D+V LQE        
Sbjct: 72  NEFKVMSFNVRH--------TETGDPETLDQRKVKIRDLILAKSPDLVGLQETSDPVITQ 123

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +       +T       K          +                  A +  +   
Sbjct: 124 WFTDQLAATYGVATTTSTVTPKLIFYKKTRFTLMS------------SGFSAMEPGTAQS 171

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV   +  N +          +                     A+ +   I  K  S
Sbjct: 172 MIWAVFKDIVTNNQYFVTNSHWSPAGSTN-------------RMSDAKAIVAVIQAKNTS 218

Query: 202 LVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
             P +  GDFN +             D      D    L     +               
Sbjct: 219 NFPLITFGDFNAQPGTAEIEYYKTSLDVIDALGDSLGDLTFHGWDAIGNTK--------- 269

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+ +       FL  E         D     G   SDH  +   Y
Sbjct: 270 -IDWMM-SNRKMGFLSWE-------VMDQPGPGGLWPSDHWAVMATY 307


>gi|69244470|ref|ZP_00602886.1| Endonuclease/exonuclease/phosphatase [Enterococcus faecium DO]
 gi|257881648|ref|ZP_05661301.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,231,502]
 gi|258615343|ref|ZP_05713113.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium DO]
 gi|293562857|ref|ZP_06677329.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1162]
 gi|294623334|ref|ZP_06702194.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium U0317]
 gi|68196411|gb|EAN10839.1| Endonuclease/exonuclease/phosphatase [Enterococcus faecium DO]
 gi|257817306|gb|EEV44634.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,231,502]
 gi|291597228|gb|EFF28419.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium U0317]
 gi|291605181|gb|EFF34643.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1162]
          Length = 277

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 82/310 (26%), Gaps = 66/310 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ ++ N +  L  +                   L       D +++ LQE+       +
Sbjct: 1   MKFMTLNTHSWLEPEP------------EKKLQELADKILLEDYEVIALQEINQLLESEE 48

Query: 83  VFPKNTWCI------------------------FYSTERLINHSKRDSNNDIHTAIAVRK 118
           V P                                              +      A+  
Sbjct: 49  VEPAKLMKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLT 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K    L+     +           R+ +    +I+ + I+V   H   +    S      
Sbjct: 109 KK--TLESQVLTVSQFQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFY--- 163

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   + + L+++     E+ VP    GDFN  ++  G        +   DS +   
Sbjct: 164 -------FEWKNLENY---FLETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVAN 213

Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           ++  +       +  +    K+ ID+  +          E      Y           +S
Sbjct: 214 EKGKAATVEKKIDGWEQNTEKLRIDFIFV---------PEGMQVKKYQRIFDGIDSPIIS 264

Query: 294 DHCPISIDYD 303
           DH  + I+ D
Sbjct: 265 DHYGVEIELD 274


>gi|327192091|gb|EGE59069.1| hypothetical protein RHECNPAF_248003 [Rhizobium etli CNPAF512]
          Length = 267

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 69/306 (22%), Gaps = 67/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +R++S N    S                     L  Y +  DAD++ LQE+         
Sbjct: 1   MRIISLNAWGGSLH-----------------EALIDYVRQADADVLCLQEVLRAPDCGSG 43

Query: 75  -------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-----V 116
                         +               F+           D+       +A      
Sbjct: 44  WSIYRDAGLELPQRANLFAEIGAALPGHDGFFCPTSRGMLFDGDAAIAAEFGLATFVRKS 103

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                + +   +    A         R A  + V  +     +   H+         +  
Sbjct: 104 HSVIAQAIDFVHGSFSAAGWGEHPRPRNAHCIRVFSHANASAITIAHMH-----GLRDPA 158

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                    +QA  L   + +        V+ GDFN   +        +  +        
Sbjct: 159 GKGDTPAREEQALALAGLVERVWPGDEGLVVCGDFNVLSDS-----ATFNILARLGLSDL 213

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                      +  L+     DY ++                 +           +SDH 
Sbjct: 214 VTGNGLVDTRTSYYLKQGRFADYMLVTPE---------VKVARFEVVATPE----VSDHR 260

Query: 297 PISIDY 302
            + +D 
Sbjct: 261 ALLLDI 266


>gi|221055445|ref|XP_002258861.1| endonuclease/exonuclease/phosphatase family protein [Plasmodium
           knowlesi strain H]
 gi|193808931|emb|CAQ39634.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Plasmodium knowlesi strain H]
          Length = 847

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 87/346 (25%), Gaps = 67/346 (19%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG- 75
           +R++++NI          + +           +T     LL       D DI+ LQE+  
Sbjct: 502 LRILTYNILAPIYTNTKYALEYMFKNIDPCYLKTNYRSHLLIHDIS-YDYDIICLQEVSE 560

Query: 76  --SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               N  +     + +  +       N       N    ++   K          P L  
Sbjct: 561 HLHSNLFSVYLHNDFYSSYKPKSSHGNDGCSLFVNKKKFSLIEYKNYEFNQVVKIPELKD 620

Query: 134 KDSFSR----------AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                              +   ++ +  +     V  +    F F     +  +     
Sbjct: 621 VYDAFINLSNDLEEIIREIKTVFQVGIYTHRSSRNVFLVANTHFYFHSLASHIRALQSYS 680

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------------------G 219
           L    + LK    QK  + V  V++GDFN                               
Sbjct: 681 LLHILETLKKVYEQKYGTAVYVVLSGDFNTNFESEVFSFLEGKDIDSNSHLWINSKLFKK 740

Query: 220 NNDDFWKT---------------------IDPNDSLIRFPKEKDSR-CNANKNLRNKIPI 257
             DD  K                      +D    L  +   K       N N      +
Sbjct: 741 EYDDLNKYPTLFDFAKSEHNNNNQIIGPHLDRKKFLPLYSAYKKGDIAYTNWNNNFIDVL 800

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           DY  +        + +  S+  + +          SDH  I+ + +
Sbjct: 801 DYIFLSPGLKVRRVLKGISKEKFEKYGGVLSPINPSDHISIATEVE 846


>gi|297161108|gb|ADI10820.1| hypothetical protein SBI_07700 [Streptomyces bingchenggensis BCW-1]
          Length = 340

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 79/292 (27%), Gaps = 72/292 (24%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            +    +     + +V+ N+N  +                 D     +      AD+V L
Sbjct: 114 LMFADKSGGEGDLTVVTHNVNADNP----------------DPAKTAKDVAASGADVVAL 157

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +E+       K     T+          +  +                    L   YPL 
Sbjct: 158 EEL-------KGAAVPTYERALKGTYPYHTVQGTVG----------------LWSKYPLS 194

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQW 190
           G K    + G  RA+   V     ++     HL S     ++         S     A  
Sbjct: 195 GTKPVDIKLGWTRAMRTTVAAPDGRVAFYVAHLPSVRVKFNAGFTAGQRDDS-----ADA 249

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L   I+ +       ++ GD N  +N         +++ P  S +R  +           
Sbjct: 250 LGAAISNEPLDK--VILLGDLNGTMND--------RSLAPVTSQMRSAQGAAGDGFGFSW 299

Query: 251 LR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                   ID  ++       +   S   +           +  SDH P++ 
Sbjct: 300 PASFPMARIDQIMVRG-----VSPVSAWTLP----------RTGSDHLPVAA 336


>gi|291221838|ref|XP_002730926.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like
           [Saccoglossus kowalevskii]
          Length = 545

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/348 (8%), Positives = 75/348 (21%), Gaps = 68/348 (19%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q      ADI+ LQE+ +     
Sbjct: 184 FSVMCYNVLCDKYATRQIYGYCPSWALDWDYRRKGIMQEILQYGADIISLQEVETEQYYN 243

Query: 82  KVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
              P+     +             +               ++    V++  V   Q +  
Sbjct: 244 FFLPELKQLGYDGVFTAKSRAKTMTEHERRFVDGCAIFFKVNKFSLVKEHIVEFNQVAMA 303

Query: 130 LLGAKDSFSRA---GNRRAVELLVEINGKKI-------------WVLDIHLKSFCFLDSL 173
                +         +   +  ++E                    ++ +      +    
Sbjct: 304 NAEGSEVMLNRVMTKDNIGIAAMLETKDGIFENSGPHCELPSARQLILVANVHIHWDPEY 363

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV--------PFVIAGDFNRKINYLGNN---- 221
            +       +   + +   +  +               P V  GD N   +         
Sbjct: 364 SDVKLIQTMMFMSELKTFIEESSHSFRPGAMTPDSNSIPLVFCGDLNSLPDSGVIEFLSQ 423

Query: 222 ---DDFWKTIDPNDSLIRFPKEKDSR--------------------CNANKNLRNKIPID 258
              D                    +                        N     K  ID
Sbjct: 424 GAVDVNHADFKDIKYHSCLTNFSSNDHPSEFCHSFKLRRAYEGNIMSFTNYTYDFKGVID 483

Query: 259 YFVMDQNAYKFL-IQESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
           Y          L +        + E  +        +SDH  +  +++
Sbjct: 484 YIFYSHQFMHPLGVLGPIDPRWFEETKLLGCPHIHVMSDHLALLTEFE 531


>gi|293557058|ref|ZP_06675618.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1039]
 gi|291600878|gb|EFF31170.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1039]
          Length = 277

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 82/310 (26%), Gaps = 66/310 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ ++ N +  L  +                   L       D +++ LQE+       +
Sbjct: 1   MKFMTLNTHSWLEPEP------------EKKLQELADKILLEDYEVIALQEINQLLESEE 48

Query: 83  VFPKNTWCI------------------------FYSTERLINHSKRDSNNDIHTAIAVRK 118
           V P                                              +      A+  
Sbjct: 49  VEPAKLMKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLA 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K    L+     +           R+ +    +I+ + I+V   H   +    S      
Sbjct: 109 KK--TLESQVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFY--- 163

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   + + L+++     E+ VP    GDFN  ++  G        +   DS +   
Sbjct: 164 -------FEWKNLENY---FLETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVAN 213

Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           ++  +       +  +    K+ ID+  +          E      Y           +S
Sbjct: 214 EKGKAATVEKKIDGWEQNTEKLRIDFIFV---------PEGMQVKKYQRIFDGIDSPIIS 264

Query: 294 DHCPISIDYD 303
           DH  + I+ D
Sbjct: 265 DHYGVEIELD 274


>gi|301121664|ref|XP_002908559.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262103590|gb|EEY61642.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 444

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 89/296 (30%), Gaps = 37/296 (12%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + A    ++ +N+  L          ++        +         D DIV +QE  +Y+
Sbjct: 4   AGANTFSVLCYNVAGLPALLSSGDPADNSVEMGKRIS---------DWDIVNVQEDFNYH 54

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI-AVRKKNVRVLQQSYPLLGAKDSF 137
           A         +    S            +N   + +   R K                 F
Sbjct: 55  AYLYKENTQKYRTATSGGVPFGSGLNTLSNLPFSTLGLERTKWSECSNDESADCMTPKGF 114

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           +    + A       +G  I V ++H  +   ++             +   + L D+I++
Sbjct: 115 TMQAVKLA-------SGVFIDVYNLHADAGVSMNDQ--------KARASNLKQLGDYISE 159

Query: 198 KKESLVPFVIAGDFNRKINYL--------GNNDDFWKTIDPNDSLIRFPKEKDS-RCNAN 248
              +    ++ GD N +               +     I+         K  ++ +C   
Sbjct: 160 N-SAGNAVIVMGDTNTRYTRKLDTIAEFVAEQNMTDGWIEYVRKGKLPKKGAEAIKCETA 218

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   +D  +     Y  L  ++++     +  +   GK LSDH PIS  + +
Sbjct: 219 NMANKCEVVDKILYRSGKYVTLKLDTWNNEN--KAFLDKSGKALSDHPPISSTFSW 272


>gi|227829121|ref|YP_002830900.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.S.2.15]
 gi|229577921|ref|YP_002836319.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.G.57.14]
 gi|238618580|ref|YP_002913405.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.4]
 gi|284996506|ref|YP_003418273.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.D.8.5]
 gi|227455568|gb|ACP34255.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.S.2.15]
 gi|228008635|gb|ACP44397.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.G.57.14]
 gi|238379649|gb|ACR40737.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.4]
 gi|284444401|gb|ADB85903.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.D.8.5]
          Length = 247

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 73/303 (24%), Gaps = 79/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VSWN+N +                 +    L  + +N   +++  QE         +
Sbjct: 1   MKIVSWNVNGIRA---------------ALKKNLIDFIENNMFEVIMFQETKG-----DI 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +   + Y                 ++ +    K   +       +   D   R    
Sbjct: 41  VPLDFIMMGYEVISFPAK------RKGYSGVMTLTKIKPINVIKGLQIKEFDDEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V +  K  +V++ +           +      + +      L+           
Sbjct: 91  -----TVTLELKDFYVINAYFPRAGDNLERLDFKLKFNNEIENFVLKLRK--------AK 137

Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           P ++ GDFN     +                   F   +      I   +          
Sbjct: 138 PVILCGDFNIAHQNIDGAFSDPTIPGLTPQERSWFSHFLSLG--FIDTFRYLHPNVRKYS 195

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +DY ++ +     +                    + SDH PI +
Sbjct: 196 WWSYMGKAREKNLGLRLDYCIVSEELKDRIKMADILI-----------DIQGSDHAPIIL 244

Query: 301 DYD 303
           +  
Sbjct: 245 ELT 247


>gi|315126420|ref|YP_004068423.1| hypothetical protein PSM_A1337 [Pseudoalteromonas sp. SM9913]
 gi|315014934|gb|ADT68272.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 337

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/332 (11%), Positives = 88/332 (26%), Gaps = 62/332 (18%)

Query: 32  NTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           N L        ++   + ++       L  Y      D++  QE+ S  ++ ++     +
Sbjct: 3   NYLEPPNAYYEFERIYTAEQWAKKQRWLINYLTEYQPDVIGFQEVFSIESLKELVKDQGY 62

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL---LGAKDSFSRAGNRRAV 146
             ++                   A+A +   V V               +     +R+ +
Sbjct: 63  -TYFGVVDEPQVIDDFIYKRPVVALAAKYPIVEVATVELDHELADTLGLTEDFTFSRKVL 121

Query: 147 ELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW------------- 190
              +    I     +V+    K        +N        + +  +              
Sbjct: 122 RATITLPHIGNTDCYVVHFKSKRSMIELDEQNKNLTPEKNIIELLKADIAGSWGSTIQRG 181

Query: 191 ------LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID--------------- 229
                 + D I +++ +  P V+ GDFN  +     +     T+                
Sbjct: 182 SEATLLMIDIIARRESTQNPMVLMGDFNNDLADGVLSHLLTNTLRFAPTFDSNTYLAKYC 241

Query: 230 PNDSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
            ND+   F + + +  N              +    +   +DY ++            F 
Sbjct: 242 LNDAWQLFTRSQLNLANQNNENTVDLKRKPTHYFGASSSVLDYILLSCEFDSSYDDSFFE 301

Query: 277 EILYNEDDI------KSRGKRLSDHCPISIDY 302
              Y+  D         R    +DH  + I  
Sbjct: 302 VSQYHTYDRHLINPEFERDDLSTDHGVVLISL 333


>gi|257886279|ref|ZP_05665932.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,231,501]
 gi|257822135|gb|EEV49265.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,231,501]
          Length = 274

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 76/282 (26%), Gaps = 53/282 (18%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI------------------- 91
                 L       D +++ LQE+       +V P                         
Sbjct: 14  EKKLQELADKILLEDYEVIALQEINQLLESEEVEPAKLMKFCPVKNQVPIRKDNFAYRLV 73

Query: 92  -----FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                                +      A+  K    L+     +           R+ +
Sbjct: 74  QLLKEHGKEYFWSWEMSHIGYDKYEEGNALLAKK--TLESQVLTVSQSQKKEDYQTRKIL 131

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
               +I+ + I+V   H   +    S              + + L+++     E+ VP  
Sbjct: 132 IGKTKIDDQDIFVSSCHFSWWTDKKSGFY----------FEWKNLENY---FLETRVPLF 178

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFV 261
             GDFN  ++  G        +   DS +   ++  +       +  +    K+ ID+  
Sbjct: 179 FLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEKLRIDFIF 238

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +       Q  F  I             +SDH  + I+ D
Sbjct: 239 VSEGMQVKKYQRIFDGIDSPI---------ISDHYGVEIELD 271


>gi|330818610|ref|YP_004362315.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
           gladioli BSR3]
 gi|327371003|gb|AEA62359.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
           gladioli BSR3]
          Length = 268

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 78/308 (25%), Gaps = 66/308 (21%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
                  +   ++  VSWN++      G + W             +R++ ++  ADI FL
Sbjct: 7   LPFAAPQAAPNEITAVSWNLHKGRSPLGFTAWN-----------AMRRWVESTHADIYFL 55

Query: 72  QEMGS----------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           QE  +                 + V  ++      I  + +  I               A
Sbjct: 56  QEAMAKRMPRPMLASGFGAPMEDPVDDIWHCQATEIARALDWQIALGPNVFKPSWRHGNA 115

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLE 174
           +   +   L   + +        R   R  +     + G   I +L  HL          
Sbjct: 116 ILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGAAPITLLCAHLALT------- 163

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                  +   +Q  W+  WI    +   P V+AGDFN   N           +     L
Sbjct: 164 ------RAARLRQMTWIAHWIEHHAQDG-PLVLAGDFNDWRNDSVP-------LFGEIGL 209

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                               + +D   +                             LSD
Sbjct: 210 SEVATLLGESGRTFPAFSPALALDKMFVRG------------LTPLEWQAPTDDTAWLSD 257

Query: 295 HCPISIDY 302
           H P     
Sbjct: 258 HLPYIARL 265


>gi|291401572|ref|XP_002717142.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 2
           [Oryctolagus cuniculus]
          Length = 556

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/351 (10%), Positives = 88/351 (25%), Gaps = 75/351 (21%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 181 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 240

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 241 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 300

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------------WVLDIHLK 165
           +       ++        +   V +++E++ +                     +L +   
Sbjct: 301 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGEYKLTCMKPIHAADKQLLIVANA 360

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-- 217
              +     +       +   + + + +  + +        + +P V+  D N   +   
Sbjct: 361 HMHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTTDPNSIPLVLCADLNSLPDSGV 420

Query: 218 ---------LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NAN 248
                      N+ DF +       +      K+                         N
Sbjct: 421 VEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTN 480

Query: 249 KNLRNKIPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                K  IDY    +   N    L       ++ N           SDH 
Sbjct: 481 YTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 531


>gi|148688416|gb|EDL20363.1| CCR4-NOT transcription complex, subunit 6-like, isoform CRA_b [Mus
           musculus]
          Length = 542

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/345 (11%), Positives = 90/345 (26%), Gaps = 69/345 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 173 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ 232

Query: 79  AVAKVFPKNT---WCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +  F+S          +   +               V+K  V   Q 
Sbjct: 233 YFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 292

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 293 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP 352

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY-------- 217
              +       +   + + + +  + +        + +P V+  D N   +         
Sbjct: 353 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN 412

Query: 218 ---LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNK 254
                N+ DF +       +      K+                         N     K
Sbjct: 413 GGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK 472

Query: 255 IPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             IDY    +   N    L       ++ N           SDH 
Sbjct: 473 GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 517


>gi|328887220|emb|CCA60459.1| putative membrane protein [Streptomyces venezuelae ATCC 10712]
          Length = 361

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 73/297 (24%), Gaps = 68/297 (22%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L +    +   ++    + +VS N+N  +                 D     +      A
Sbjct: 118 LTVFAGTLADKSAPGGDLTVVSHNVNQDNP----------------DPQATVRSLIASGA 161

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           DIV LQE+    A         +    +     +  +            +         +
Sbjct: 162 DIVALQELSPDTA-------PAYERALAATYPHHFYEGTVG--------LWSTRPLRNAR 206

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           + P++             A+    +     + V   HL S     +   +         +
Sbjct: 207 ALPIMPWTR---------ALRATADTPAGPVAVYVAHLPSVRVGATGFTSG-----TRDE 252

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            A  L  ++  ++      ++ GDFN   +                S      E      
Sbjct: 253 AAGLLAGFLRAERSP--RVLVMGDFNGSTDD----RGLRPLTAGMASAQSTSGEGFGLTW 306

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   + ID  ++               +              SDH P++   D
Sbjct: 307 PASFP--LVRIDQILLKGA-----RATGSWTLPAT----------ASDHLPVAARVD 346


>gi|331230830|ref|XP_003328079.1| hypothetical protein PGTG_09373 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309307069|gb|EFP83660.1| hypothetical protein PGTG_09373 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 532

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 75/289 (25%), Gaps = 63/289 (21%)

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           DIV LQE+  Y+    +  +     F        +SK   +  + + +A+  +   +   
Sbjct: 102 DIVALQELWVYHDFLVIRDRAKEGGF-------KYSKWFHSAALGSGLAILSRFPIISSH 154

Query: 127 SYPLLGAKDSFSRAGNRRAV-----ELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPS 180
            +P L              V       L+++    ++ V   HL +   + + E      
Sbjct: 155 FHPYLLNGHPLHFIQGDFFVGKSVGSCLLDVPTVGEVEVFTTHLYAPHDVPAPEWKR--- 211

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPND 232
            +  + QA  L   +    E      + GD N   + L            D W    PN 
Sbjct: 212 -AHRTAQAWELAKLVRASAERGRTVFVCGDLNSVPSSLPITLLQSYGQLRDSWIASHPNG 270

Query: 233 SLIRFPK---------------EKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFL 270
                                 +                       +DY +    A +  
Sbjct: 271 LSTISTNEMTYRTAIQEEGITCDSLINTFTASKNAANRGAKGYGKRLDYILYRPAAKRLT 330

Query: 271 IQESF----------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++                     +   D I   G   SDH  +   + 
Sbjct: 331 RRDRLGRCQTEFIDDQNITCDHCAVILTDPIPVFGYSYSDHFAVEASFT 379


>gi|170033460|ref|XP_001844595.1| carbon catabolite repressor protein [Culex quinquefasciatus]
 gi|167874443|gb|EDS37826.1| carbon catabolite repressor protein [Culex quinquefasciatus]
          Length = 479

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 55/204 (26%), Gaps = 12/204 (5%)

Query: 23  KVRLVSWNI---NTLSEQEGVSLWKNS-VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+ +NI     L     +    +S        Y  L      +  DI+ LQE+   +
Sbjct: 86  QFTLMCYNILAQELLEMHADLYDRHDSVALSWPHRYDRLMAEINLVRPDILCLQELQDDH 145

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                     +           + KR  +     AI  R+    ++              
Sbjct: 146 REQFSNGLANFNYGML------YKKRTGDKPDGCAIFFRRDLFELVDHQDVEYYQPSVKL 199

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWIT 196
                 A+   +++ G     L +      +    ++       +L  +   L       
Sbjct: 200 LDRENVALIAKLQVKGNPTQRLVVATTHLLYNPRRQDVRLAQVQVLLAELDRLAFSGRFA 259

Query: 197 QKKESLVPFVIAGDFNRKINYLGN 220
                  P ++ GDFN +      
Sbjct: 260 NGTPKYTPSIVCGDFNLQPYSAPY 283


>gi|157737125|ref|YP_001489808.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri RM4018]
 gi|157698979|gb|ABV67139.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri RM4018]
          Length = 526

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 99/342 (28%), Gaps = 84/342 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDYTLLRQYAKNLDADIVF 70
              +++ S+N+    +        N          + K        L +   ++DADI+ 
Sbjct: 20  GSNLKIASYNVENFFDLSYDKSEYNEFIPNNNSLWNQKNFNVKLNNLIKVIDDIDADIIG 79

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ + + +  +  K     ++S  +  + +           +    K       S  +
Sbjct: 80  LQEIENKDLMQLLQKKLPKYKYFSFIKYPDSA---------VGLGFLSKVEIKNSSSIDV 130

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                 F     R  +E        +  + + H  S           + + +   + A+ 
Sbjct: 131 -----KFIDKLFRPILETTFIYENVEFKIFNNHWPS----------KAAAENYRIKYAKT 175

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND-- 232
           L+D +  K      +++ GDFN   N                  G N     TID +   
Sbjct: 176 LQDRL-LKLPKDYDYILLGDFNSNYNEFETFKKDLKLNLTSGVTGINHVLNTTIDDHFIT 234

Query: 233 -----------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----LIQESFSE 277
                          +   K S   + K        D  ++  + +       I++SF  
Sbjct: 235 YDDILKEEKKVHYNLWLDIKTSERFSTKFKNQNNTPDNIILSSSLFDNKNLTYIKKSFEV 294

Query: 278 I----------------LYNEDDIKSRGKRLSDHCPISIDYD 303
                              + +    +G+  SDH PI   + 
Sbjct: 295 FKPNYLYENGEVKRWKMTQDRNIKIHKGEGFSDHLPIFAKFS 336


>gi|53715061|ref|YP_101053.1| hypothetical protein BF3777 [Bacteroides fragilis YCH46]
 gi|60683023|ref|YP_213167.1| putative exported phosphatase [Bacteroides fragilis NCTC 9343]
 gi|52217926|dbj|BAD50519.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60494457|emb|CAH09253.1| putative exported phosphatase [Bacteroides fragilis NCTC 9343]
          Length = 312

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/340 (9%), Positives = 89/340 (26%), Gaps = 74/340 (21%)

Query: 2   IRKYVLALVFFLVPCTA------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           + K++   V  +    A      +  ++++++SWN+      +                 
Sbjct: 1   MNKFIYIFVAIVAISFASCTQERAKEKELKVLSWNVWHAGHAKNYP---------EKGCE 51

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
                 +   AD++ + E  +Y A   V     +     ++                 + 
Sbjct: 52  GTIGILRKSQADVILMIE--TYGAAPMVADSLGYDYVLLSDN----------------LC 93

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  +        +P   +  +F          + ++++G  + + D  L     +  +  
Sbjct: 94  IYSRYPIKKTYLFPDSISTFNFGG--------VEIDMDGTPVRLFDTWLHYLPDMRLVPT 145

Query: 176 TYSP-------SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWK 226
             S               + + +   +          P ++ GDFN   +    +     
Sbjct: 146 EQSETDILAWDDAGTRDNEIRRILSVLQPMIRQTDSIPMIMGGDFNVHSHLDWTDATKDM 205

Query: 227 TIDPNDSLIRF--------------------PKEKDSRCNANKNLRNK---IPIDYFVMD 263
                  +                       P++         N         ID+    
Sbjct: 206 YHHGGAVVEWTVSKEMQNAGFKDSFREIHPEPEKNIGTTWIYDNEDKPLRSDRIDFIYYQ 265

Query: 264 QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDY 302
               + +  ES+++ L      +       SDH  +   +
Sbjct: 266 GKTIRAITSESYNQELTKPLKFMGEEFFYPSDHGFVMTTF 305


>gi|332992087|gb|AEF02142.1| hypothetical protein ambt_02940 [Alteromonas sp. SN2]
          Length = 412

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/370 (9%), Positives = 88/370 (23%), Gaps = 89/370 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY--------TLLRQYAKNLDADIVFLQE 73
           Q +++ ++N++  S          S K                + +  + ++ DI+ L E
Sbjct: 40  QTIKVATFNVSMESTNYKALGLAPSAKVLQKVLSNGENSQVKNIAEIIQRVNPDILLLNE 99

Query: 74  MGSYNAVAKVFPKNTWCIFYSTE---------------------------------RLIN 100
                  +             ++                                 +   
Sbjct: 100 FDYIADQSVGIDYFIKHYLNVSQGGQKAVDYGYVYTNTVNTGEPTNFDLDNNGKKEQFGG 159

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV-------------- 146
            +           + V  K       +      K        +  +              
Sbjct: 160 DAYGYGLYPGQYGMVVLSKYPIEQANARTFQTFKWQDMPNAQQPILPAASTDEKGTPWYS 219

Query: 147 ---------------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                          ++ V +NGK + +L +H     F  + +   + +   +   A +L
Sbjct: 220 KEEWQAFRLSSKSHWDIPVNVNGKIVHILAMHPTPPNFDGAEDRNGTRNHDEIRLMADYL 279

Query: 192 K----DWITQKK------ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI------ 235
                 +I          +    FV+ GDFN       +  D  + +  +  +       
Sbjct: 280 TPERGGYIYDDAGEQVSLKENDRFVLVGDFNAADIGDKHRPDVIEQLTESPLVNNRLIPT 339

Query: 236 --RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL- 292
                       ++          DY +  Q  +       F     ++       ++  
Sbjct: 340 SAGGAAASSEAFSSRFTAYWGARADYVLPSQYGFDVKDAGVFWPTKDSDLYRLVNDRQAS 399

Query: 293 SDHCPISIDY 302
           SDH  + +  
Sbjct: 400 SDHRMVWVTL 409


>gi|322832105|ref|YP_004212132.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602]
 gi|321167306|gb|ADW73005.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602]
          Length = 370

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/268 (10%), Positives = 64/268 (23%), Gaps = 45/268 (16%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
           +    + +  ++V  T  +   L    ++   DI+ L E            +      +S
Sbjct: 98  NGHSRIKIMNSNVLTTNREPEKLLAQVRHYQPDILVLLETD--QWWEDQMAELDADYPHS 155

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                         +    + V  +      +   L+              +    E+  
Sbjct: 156 LRC---------PLENLYGMHVYSRLPMQAAKIQYLVADDIPS--------MHFRAELPS 198

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
            +  +L             + + S            L        ++  P ++ GD N  
Sbjct: 199 GEQVILHCLHPMPPSPTEADESTSRDG--------ELVAVGHTAAKARYPTIVTGDLNDV 250

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                           +  L                   + P+D+    ++         
Sbjct: 251 AWSRTTRLFM----KISGLLDPRRGRGMYNTFHASYPFLRWPLDHVFHSKD--------- 297

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +   D+K      SDH PI ++ 
Sbjct: 298 -----FTLIDLKRLDFMGSDHFPILVEL 320


>gi|304382431|ref|ZP_07364930.1| AP endonuclease domain protein [Prevotella marshii DSM 16973]
 gi|304336439|gb|EFM02676.1| AP endonuclease domain protein [Prevotella marshii DSM 16973]
          Length = 362

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 75/300 (25%), Gaps = 72/300 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKVF 84
           ++S+N+      E      N           +       + DI+ LQE    +   + V 
Sbjct: 102 VMSYNVCMFLPWEVPEGQSNP----------IADDIIKANPDILCLQEASLKFPIPSDVM 151

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +      Y                  + +A+  K   + ++        +         
Sbjct: 152 HRLKKQYAYCDTTYKGRDG--------SCLALFSKFPILSRKQIRYKSIYNMSMAYM--- 200

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS---------------------- 182
                + I+G  + V++ H +      +    +                           
Sbjct: 201 -----LNIHGDTVIVINNHFEGTGLTLNERREFKRMLKGELKAYMARKESQRLIDRLATS 255

Query: 183 --LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
               + QA  +  ++   K      ++ GDFN             +T   +     +   
Sbjct: 256 TATRAPQADSVAAFVKANKRHS--IILCGDFNDNPLSYT------RTTLGDVLTDCYIAT 307

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +    +  + R  + ID  +       +  +                  + SDH PI  
Sbjct: 308 GNGPGISYHDNRMYVRIDNIMCSDEWIPYACKV-------------DNKMKHSDHYPIYC 354


>gi|290992793|ref|XP_002679018.1| predicted protein [Naegleria gruberi]
 gi|284092633|gb|EFC46274.1| predicted protein [Naegleria gruberi]
          Length = 348

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 92/311 (29%), Gaps = 55/311 (17%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           + +   ++   +V++ S+NI             +S     +   ++ +       D+V +
Sbjct: 37  YALAHASASKNEVKIASFNIQIFG---------SSKMEKKNVLAVILKILSRY--DLVLI 85

Query: 72  QEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           QE+           V   + +         I+     SN+            V++++   
Sbjct: 86  QEVRDSSDTAFANLVKELSNYNKNVKYGSAISERLGRSNSKEQYGFIYNTDKVKMIKT-- 143

Query: 129 PLLGAKDSFSRAGNRRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
             +  KD+      R     + E+N     G++  +L  H+K    ++            
Sbjct: 144 --VQFKDTKGWFE-RPPFAFVFELNAAKLKGQQFAILGCHIKPGDVVNE----------- 189

Query: 184 LSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                  L +     K        ++ GDFN   +YL + +     +  +          
Sbjct: 190 ----LNHLVEVYDSFKSEPFYKNIILTGDFNADCSYLSDTEMKKLKLSTDARFKWLIDMD 245

Query: 242 DSRCNANKNLRNKIPIDYF---------VMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +  ++  +        Y          +     Y+      +      +   +   + +
Sbjct: 246 STVADSECSYDR-----YIVPVELSAKKLSSGALYELGQATVYRYDKDMKITDEELVEDV 300

Query: 293 SDHCPISIDYD 303
           SDH PI +   
Sbjct: 301 SDHYPIEMTIT 311


>gi|289620712|emb|CBI52722.1| unnamed protein product [Sordaria macrospora]
          Length = 478

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 84/309 (27%), Gaps = 38/309 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + ++S N+  L     +    +      +    +         D++ +QE  +Y+A 
Sbjct: 28  SGDLTILSMNVAGLPA---ILNPNDVAGGKKAAAKTIGSKFAEYGYDVIHVQEDFNYHA- 83

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                 + +       R          + ++T   +   +   L+Q +        F   
Sbjct: 84  ------HLYSTDTHPFRTPTSGGVPFGSGLNTLSTLPWLSGSFLRQKWDKSSCASEFDCL 137

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFL------------DSLENTYSPSCSLLSQQA 188
             +    + + ++                              +   T        +   
Sbjct: 138 TPKGFTFMRIALSPSSSSSPSSDASDAPDGKESEVYVDFYNLHTDAGTQPLDLKARNDNL 197

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCN 246
           + + +WI   K      ++ GD N + +  G+        + +P           +   N
Sbjct: 198 RQITEWIN-HKSKGNAVLVYGDVNSRYSRAGDTGIRSLLASENPTGPAGLTDVWIEIHRN 256

Query: 247 ANKNLR-----------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +                    +D  +   +    L   +F         + + G  LSDH
Sbjct: 257 SILPSDATVCGNPAETATCEIVDKVLYRSSPLVKLQPTAFE--YAAPKFLSAEGGVLSDH 314

Query: 296 CPISIDYDF 304
            P+ ++  +
Sbjct: 315 NPVLVNLTW 323


>gi|88703392|ref|ZP_01101108.1| Exodeoxyribonuclease III [Congregibacter litoralis KT71]
 gi|88702106|gb|EAQ99209.1| Exodeoxyribonuclease III [Congregibacter litoralis KT71]
          Length = 266

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 83/304 (27%), Gaps = 78/304 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82
           R+VS+N N +        +                +    + D+V +QE    ++    +
Sbjct: 9   RIVSFNANGIRAASRKGFF---------------DWMARFNPDVVCVQETKAQAHQLTDE 53

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           VF    +   Y+      +          +  AV  +       +       DS  R   
Sbjct: 54  VFHPRGYHCIYNDAVKKGY----------SGTAVYSRVKPRAVTTQLGWEPVDSEGRY-- 101

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  ++ +   + V+ +++ S    D+       +        +   + +   K   
Sbjct: 102 -------LQCDFDGLSVISLYVPSGSSSDA-------ALEKKFTFMELFYEHLRALKRKR 147

Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247
             F+I  D+N     +   +                +   I      +   +  D   + 
Sbjct: 148 RDFIICADWNTCHQNIDLRNWKPNQKNSGFLPEERAWLDRIYDEIGFVDSFRVIDKEPDR 207

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           +DY ++       +   S               +R SDH P 
Sbjct: 208 YTWWSNRGQAWANNVGWRLDYQMITPKLVPAVRAASI-----------YTDERFSDHAPQ 256

Query: 299 SIDY 302
            ++Y
Sbjct: 257 VMEY 260


>gi|253566160|ref|ZP_04843614.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265766910|ref|ZP_06094739.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|251945264|gb|EES85702.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263253287|gb|EEZ24763.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 312

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/340 (9%), Positives = 89/340 (26%), Gaps = 74/340 (21%)

Query: 2   IRKYVLALVFFLVPCTA------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           + K++   V  +    A      +  ++++++SWN+      +                 
Sbjct: 1   MNKFIYIFVAIVAISFASCTQERAKEKELKVLSWNVWHAGHAKNYP---------EKGCE 51

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
                 +   AD++ + E  +Y A   V     +     ++                 + 
Sbjct: 52  GTIGILRKSQADVILMIE--TYGAAPMVADSLGYDYVLLSDN----------------LC 93

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  +        +P   +  +F          + ++++G  + + D  L     +  +  
Sbjct: 94  IYSRYPIKKTYLFPDSISTFNFGG--------VEIDMDGTPVRLFDTWLHYLPDMRLVPT 145

Query: 176 TYSP-------SCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWK 226
             S               + + +   +          P ++ GDFN   +    +     
Sbjct: 146 EQSETDILAWDDAGTRDNEIRRILSVLQPMIRQTDSIPMIMGGDFNVHSHLDWTDATKDM 205

Query: 227 TIDPNDSLIRF--------------------PKEKDSRCNANKNLRNK---IPIDYFVMD 263
                  +                       P++         N         ID+    
Sbjct: 206 YHHGGAVVEWTVSKEMQNAGFKDSFREIHPEPEKNIGTTWIYDNEDKPLRSDRIDFIYYQ 265

Query: 264 QNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDY 302
               + +  ES+++ L      +       SDH  +   +
Sbjct: 266 GKTIRAITSESYNQELIKPLKFMGEEFFYPSDHGFVMTTF 305


>gi|145351399|ref|XP_001420068.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580301|gb|ABO98361.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 371

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/343 (10%), Positives = 87/343 (25%), Gaps = 71/343 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                 ++ +   SWN N L     +    +   R T     L +       D++ LQE+
Sbjct: 5   FTVEDASEPLSFASWNANGL--LNRIRDKSDPNGRRTRALLALSENVMRKRPDVIALQEV 62

Query: 75  ---------------------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                                           +  +  +  +  + +   L N  +    
Sbjct: 63  WLKCEEMGKGTGKWDHAKMGAEDKKLRDEKAFIEALMGRRPFKNYDAYYCLANARRAGVI 122

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
             +   +A   +  R L      +   +  +  G       ++ +  +K+ VL+ ++   
Sbjct: 123 TMVKKCLAKPIRVARTLALDGRDVTPDEIDTNEGR------VLMLEYEKMIVLNTYVPHN 176

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-------- 219
                     +     + +  +                V  GD N               
Sbjct: 177 GSNAERYEKRALWDFRVQRFLE--------NYRGKKDVVWMGDLNVAHQDHDVGPSPRLF 228

Query: 220 --------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                        +  I     ++   +  +           +         + +DYFV+
Sbjct: 229 EGVGGFTLPERRRFTDILAATDMVDTYRAFNGDRLTYTWRSTRGQGLDGWQGMRLDYFVV 288

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRG---KRLSDHCPISIDY 302
            +     +     S   +++   +S        SDHC I +  
Sbjct: 289 PRKLVARIKSCETSTDRFDDTTAQSMPMSCFMDSDHCMIHLSL 331


>gi|108762299|ref|YP_631376.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108466179|gb|ABF91364.1| endonuclease/exonuclease/phosphatase family [Myxococcus xanthus DK
           1622]
          Length = 307

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 82/290 (28%), Gaps = 57/290 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             ++     + +V++N++   +        +                    AD++ +QEM
Sbjct: 73  TVSSEAPASITVVTFNLSFAEKVTEAITALSRPPLA--------------GADVIAMQEM 118

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
               +V ++  +      Y       +      +D     A+  +   V  +   L    
Sbjct: 119 -DAASVDRIASELGLAYVY-------YPASVQVDDDDFGNALLSRWPIVADRKVHLP--H 168

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       R AV   ++I G  +    +H  +                    QA+ +   
Sbjct: 169 DDPYHQRRRIAVLATLDIGGTLVQTASVHNATPIVGLGG----------RLDQAETI--- 215

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I   + +    VIAGDFN        +      +          +      ++       
Sbjct: 216 IDAMEGTGPVQVIAGDFN---TSDPGSLRQMVKLFSERDFQWASEGVGDTVDSVI---GG 269

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +P+D+                   L   +    R    SDH P+ + + +
Sbjct: 270 LPLDFVFAQG--------------LAPLERGVDRRPAGSDHHPVWVRFAW 305


>gi|327262432|ref|XP_003216028.1| PREDICTED: protein angel homolog 2-like [Anolis carolinensis]
          Length = 562

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 62/219 (28%), Gaps = 16/219 (7%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         ++ +      +  +    K L+AD++ LQE+    
Sbjct: 182 DFTVMSYNILSQDLLEDNSHLYKHCQHHLLTWNYRFPNILAEIKKLNADVLCLQEVQEDQ 241

Query: 79  AVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              ++        +   Y            +         V    V   +++ PLL   +
Sbjct: 242 YGTQIKPSLEALGYHCEYKMRTGRKPDGCATCFKTSKFSLVSSSPVEFFRRNIPLLDRDN 301

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  +          G  I V + HL                 + L+     + +  
Sbjct: 302 VGLVLLLQPRFYCK---TGATICVANTHLLYNP------RRGDIKLTQLAMILAEIANLA 352

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
            Q+     P V  GDFN   +    N      ++     
Sbjct: 353 IQEDGRFCPLVFCGDFNSVPHSPLYNFLTEGKLNYEGLA 391


>gi|319777367|ref|YP_004137018.1| putative membrane nuclease a [Mycoplasma fermentans M64]
 gi|238809543|dbj|BAH69333.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|318038442|gb|ADV34641.1| Putative membrane nuclease A [Mycoplasma fermentans M64]
          Length = 647

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 90/338 (26%), Gaps = 69/338 (20%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77
              K+R+  WNI  L E                    L    ++L+ D++ L E  +   
Sbjct: 316 AKSKIRIGMWNILNLYETSEEYKKYG-----------LASVIEHLNLDVIGLIENKTKAS 364

Query: 78  -----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                  + K    N W +  S   + N  K    +  H   A   K  ++  + +    
Sbjct: 365 AQKFCEYLKKFTGNNNWELIASDNTIHNP-KLAPTSKQHECPAFIYKKDKIAIEKFINGK 423

Query: 133 AKDSFSRA------------GNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTY 177
               +  +              R  + +  +  G        +  HL S     S E+  
Sbjct: 424 EWLGYDNSTFVVNEENNNLGYVRPPMGVKFKTLGPIQNNFTFVIDHLDSPGAAKSGESKS 483

Query: 178 SPSCSLLSQQAQW------LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           S      +Q+A        L DW  Q+       +  GD N K+        F + +   
Sbjct: 484 SLLSKQGAQEADEAYNLKNLMDWFDQQDGDNDDLIFVGDTNIKLGNQAT--AFSEILKDQ 541

Query: 232 DSLIRFPK--EKDSRCNANKNLRNKIPIDYFVMD------------------QNAYKFLI 271
                     +  S  + +   +   P D                        N  K   
Sbjct: 542 YYKALLTDSKQHKSSLSNSTWGKYSEPYDKIFTRTNLKYENANFFPLYDIFKDNILKDYQ 601

Query: 272 QESFSEILYNEDDIKSRG-------KRLSDHCPISIDY 302
                +   +    K+           +SDH PI  D 
Sbjct: 602 TIEEWKTYVDTIRKKTYDKDLKYIFHAISDHSPIYFDL 639


>gi|125531889|gb|EAY78454.1| hypothetical protein OsI_33543 [Oryza sativa Indica Group]
          Length = 563

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 22/226 (9%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           + +      ++S+NI  +  +  +  S         T     L +      ADI+ LQE+
Sbjct: 247 SQTSFGTFSVLSYNILADAYATSDAYSYCPTWALSWTYRRQNLMREIIGYHADIICLQEV 306

Query: 75  GSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                 +  +    K+ +   Y       ++      D       R K   V +      
Sbjct: 307 QLNHFEDFFSPELDKHGYQALYKKRTTEVYTGAPHAIDGCATFFRRDKFSHVKKYEVEFN 366

Query: 132 GAKDSFSRA-----GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT---------- 176
            A  S + A       R A+  L++ N   I VL+    +    +  +            
Sbjct: 367 KAAQSLTDAIIPSTQRRVALSRLIKDNVALIAVLEAKFGNHGTDNPGKRQLLCVANTHVN 426

Query: 177 -YSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGN 220
                  +   + Q L   + +    + +P ++ GDFN       +
Sbjct: 427 VLQDLKDVKLWEVQTLLKGLEKIAVSADIPMLVCGDFNSVPGSSPH 472


>gi|121602196|ref|YP_988341.1| endonuclease/exonuclease/phosphatase family protein [Bartonella
           bacilliformis KC583]
 gi|120614373|gb|ABM44974.1| endonuclease/exonuclease/phosphatase family protein [Bartonella
           bacilliformis KC583]
          Length = 299

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 75/277 (27%), Gaps = 51/277 (18%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
            S+N++     + V                + +    L ADI+ LQE+         F  
Sbjct: 51  ASYNVHKCVGVDKVFNPT-----------RIVRVIAELQADILALQEVDKRFEERIGFID 99

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             +    +   L+  + +  +       A+  +   V          + +      R AV
Sbjct: 100 LEFLKSETDLTLVPLNTKSPHGHGWHGNALFLRQGHVRD------ILQINLPGIEPRGAV 153

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
              +E+N   I V+  H                     ++Q + L   +   K   +P +
Sbjct: 154 IAELEMNMGAIRVIAAHFSLLRHS-------------RNKQVKMLLALLQ--KRPFMPTL 198

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           I GD N         +              +         +  +    + +D      + 
Sbjct: 199 IIGDLN---------EWRVGKRSSLHHFSLYFDTTLGVVPSFPSRFPFLALDRVFAFPH- 248

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      I   E  +    +  SDH PI    D
Sbjct: 249 ---------QLITGVESHLSPLARIASDHLPIKAYLD 276


>gi|237725259|ref|ZP_04555740.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229436525|gb|EEO46602.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 312

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 87/339 (25%), Gaps = 81/339 (23%)

Query: 1   MIRKY----VLALVFFLVPCTASV---AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           M++      ++A   F +          + + ++SWN+              S       
Sbjct: 1   MMKTRNLIGMIAFCLFALAACTPSKESGKTLTVLSWNVWHGGH---------SKTYPEKG 51

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
                   K  +AD++ + E                   Y    ++  S   S N I   
Sbjct: 52  CKGTIDILKKSEADVILMVET------------------YGAAPMVADSLGYSYNLISDN 93

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + +  +   + + ++    +  +F          +++++NGK + V D  L     +   
Sbjct: 94  LCIYSRYPIIRKYAFADSISTFNFGG--------VMIDVNGKPVRVFDTWLHYLPDMRLA 145

Query: 174 ENTYSPSCS-------LLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDF 224
               S              ++   +   I          P ++ GDFN   +        
Sbjct: 146 PTDKSEEEILAWEMEGTRDEEIHRILTVIRPLLAETDSIPIIMGGDFNVHSHLDWTEAT- 204

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------------------------PI 257
            + +  +   +       +   A      +                             I
Sbjct: 205 -RNLYHHGGAVVNWPVSIAMEEAGFKDSFREMNSDPVASPGVTWLADADSLETECRMDRI 263

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-KRLSDH 295
           D+        + +  E +   L      K       SDH
Sbjct: 264 DFIYYQGKTIQAIASECYDNSLGKTFTFKGEDFFYPSDH 302


>gi|323339285|ref|ZP_08079576.1| RgfB protein [Lactobacillus ruminis ATCC 25644]
 gi|323093286|gb|EFZ35867.1| RgfB protein [Lactobacillus ruminis ATCC 25644]
          Length = 272

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 78/304 (25%), Gaps = 65/304 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + ++ N ++L             +       +L     + D D+V LQE+          
Sbjct: 3   KFLTLNTHSL-----------LGENVEEKLKILGDEIFSGDYDVVCLQEVNQLMTSDTTQ 51

Query: 85  PKNTWCIFY----------------------STERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +C                         +T            +  +  +A+  K   
Sbjct: 52  DLPGYCPVAGEIAIHEDNYGLQLARYLAQKGTTYYWSYAYNHVGYDRFNEGVAIFSKEPL 111

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                  L+   D  S    R+ +     ++GKK  V   H                   
Sbjct: 112 EASSV--LVSKSDDPSDYHTRKMLFCQTVVDGKKTCVASAHFSWLKDG------------ 157

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    ++ +          VI GDFN   N  G        +   D+      ++ 
Sbjct: 158 ----FLDEWENAVEALAAQGESLVIMGDFNNPANTKGYQAILDSKLLLRDTYAEADVKEG 213

Query: 243 SRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                   +  +  ++ + ID+    +N         F            +   +SDH  
Sbjct: 214 ENTIEADIDGWEGNKDALRIDFIFATKN---------FVPQTSKVVFDGKKTPAISDHFG 264

Query: 298 ISID 301
           +S +
Sbjct: 265 VSCE 268


>gi|255075203|ref|XP_002501276.1| predicted protein [Micromonas sp. RCC299]
 gi|226516540|gb|ACO62534.1| predicted protein [Micromonas sp. RCC299]
          Length = 353

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/314 (8%), Positives = 71/314 (22%), Gaps = 61/314 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            T   A++ + +SWN+  L              + +     +         D++ +QE  
Sbjct: 71  STPPGAKRFKAISWNVAGLRALLD---------KNSHTLRRIADV---ESPDVICVQEHK 118

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             +    V            E         +    ++ +                +G   
Sbjct: 119 LQDVH--VNDAVRRLGEILPEYRTVKFAVSTAKKGYSGLL----------SVVEGMGDFR 166

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R     ++ +      ++  ++ +                +  +      D  
Sbjct: 167 CGYTDEGR-----VLTLEFDAFTMVFTYVPNSGQKLERLEYRLKKWDVDFRAYLAHLD-- 219

Query: 196 TQKKESLVPFVIAGDFNRKINY------------------LGNNDDFWKTIDPNDSLIRF 237
              +    P ++ GD N                             + +T++    +  F
Sbjct: 220 --GETRGKPVIVGGDLNVGHLDEDIYNVDAPHTKKQCGLTPEERSSWTRTLESVKLVDTF 277

Query: 238 PKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                +          +           +DYF   +              + +   +   
Sbjct: 278 RAFHPNARGWYSYWSGRAGNKPRNRGLRLDYFAASERIMSSGRDGG-GVRVVDSFVLDKL 336

Query: 289 GKRLSDHCPISIDY 302
               SDH P+ I  
Sbjct: 337 VAEASDHAPVGITL 350


>gi|164423882|ref|XP_958700.2| hypothetical protein NCU07779 [Neurospora crassa OR74A]
 gi|157070271|gb|EAA29464.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 786

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/365 (9%), Positives = 85/365 (23%), Gaps = 79/365 (21%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +   +++++++WNI  +  +                     + Q  ++ D D++ LQE+
Sbjct: 381 VSPSLERIKVMTWNILCDKFATTNMYGYTPTGALSWEYRKERILQEIRDRDVDMLCLQEI 440

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPL 130
            +        P+     +         +K  +  D       AI  +     +L +    
Sbjct: 441 ATDVFRDFFSPELAQNDYKGVHWPRPKAKTMNEKDAAAVDGCAIFYKGSKWILLDKQLID 500

Query: 131 L-----------GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                          D F+R   +    +    E       V+  +          +   
Sbjct: 501 YANIAINRPDMKNQHDIFNRVMPKDNIGIICFFESRRTGARVIVANTHLAWEPTLADVKL 560

Query: 178 SPSCSLLSQQAQWLKDWITQKK-----------------------------------ESL 202
             +  L+    ++ + ++  +                                     + 
Sbjct: 561 VQTAILMENITKYAEKYVRWQPLKDKRGIQIPQSVSVESDIPKPEMPEPGPSQEYRSNTD 620

Query: 203 VPFVIAGDFNRKINYLGN------------------------NDDFWKTIDPNDSLIRFP 238
           +P ++ GD+N                                 D          + +   
Sbjct: 621 IPLIVCGDYNSTQESSVYELLSMGRVTPEQSDFGGHQYGNFTRDGVAHPFSMRSAYVHLN 680

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              D     N     +  IDY            +     +               +DH  
Sbjct: 681 GTPDELSFTNYVPGFQEVIDYIWYSTNTLEVVELLGPPDQNHLKRVPGFPNYHFPADHIQ 740

Query: 298 ISIDY 302
           I  ++
Sbjct: 741 IMAEF 745


>gi|189035875|sp|Q9C2R2|CCR4_NEUCR RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
          Length = 793

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/365 (9%), Positives = 85/365 (23%), Gaps = 79/365 (21%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +   +++++++WNI  +  +                     + Q  ++ D D++ LQE+
Sbjct: 388 VSPSLERIKVMTWNILCDKFATTNMYGYTPTGALSWEYRKERILQEIRDRDVDMLCLQEI 447

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPL 130
            +        P+     +         +K  +  D       AI  +     +L +    
Sbjct: 448 ATDVFRDFFSPELAQNDYKGVHWPRPKAKTMNEKDAAAVDGCAIFYKGSKWILLDKQLID 507

Query: 131 L-----------GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                          D F+R   +    +    E       V+  +          +   
Sbjct: 508 YANIAINRPDMKNQHDIFNRVMPKDNIGIICFFESRRTGARVIVANTHLAWEPTLADVKL 567

Query: 178 SPSCSLLSQQAQWLKDWITQKK-----------------------------------ESL 202
             +  L+    ++ + ++  +                                     + 
Sbjct: 568 VQTAILMENITKYAEKYVRWQPLKDKRGIQIPQSVSVESDIPKPEMPEPGPSQEYRSNTD 627

Query: 203 VPFVIAGDFNRKINYLGN------------------------NDDFWKTIDPNDSLIRFP 238
           +P ++ GD+N                                 D          + +   
Sbjct: 628 IPLIVCGDYNSTQESSVYELLSMGRVTPEQSDFGGHQYGNFTRDGVAHPFSMRSAYVHLN 687

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              D     N     +  IDY            +     +               +DH  
Sbjct: 688 GTPDELSFTNYVPGFQEVIDYIWYSTNTLEVVELLGPPDQNHLKRVPGFPNYHFPADHIQ 747

Query: 298 ISIDY 302
           I  ++
Sbjct: 748 IMAEF 752


>gi|193216492|ref|YP_001999734.1| membrane nuclease A [Mycoplasma arthritidis 158L3-1]
 gi|193001815|gb|ACF07030.1| membrane nuclease A [Mycoplasma arthritidis 158L3-1]
          Length = 466

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 90/326 (27%), Gaps = 60/326 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-- 79
           QK++   WN+  LS++                   +    K +D D+V L E+ S  A  
Sbjct: 157 QKMKWGHWNVLKLSDKND------------KKIAAIAALIKKIDYDVVGLTEVFSEEAVK 204

Query: 80  -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--------- 125
                + K+    T+    S +   +++   +    H  +    + ++ +          
Sbjct: 205 EVVAQLNKLAGSGTYSYVASKKLKGSYAG--NLQAEHVGVIYNSQKIKTIPFEKTKNNKK 262

Query: 126 -------QSYPLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLEN 175
                  + +     K        R    +  +      +    +  H  S         
Sbjct: 263 EIGYSYIEKFNSEFIKKHNKAEYVRPPYGVKFQWLKGKKEDFTFVFDHFDSPGGSKGEGT 322

Query: 176 TYSPSCSLL--SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           T       L  ++Q   + D   +          +GD N  I        F + +     
Sbjct: 323 TSGVGNQELAEARQLANVLDHFDEIDGENEDIFFSGDTN--IKAGKEKFAFGEELFKKYQ 380

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291
                  + +     K      P D     +  +K      +     ++DD  +   +  
Sbjct: 381 SAFKDNLEFATSLGIKAGNYSQPYDKMF-TKTKFKTSNHGIYKLWDLSKDDEFTNLFKEL 439

Query: 292 -------------LSDHCPISIDYDF 304
                        +SDH PI  + +F
Sbjct: 440 HNGKIETSEIRKLVSDHAPIYSEVEF 465


>gi|1173836|gb|AAA86615.1| membrane nuclease A [Mycoplasma pulmonis]
          Length = 470

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 90/326 (27%), Gaps = 60/326 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-- 79
           QK++   WN+  LS++                   +    K +D D+V L E+ S  A  
Sbjct: 161 QKMKWGHWNVLKLSDKND------------KKIAAIAALIKKIDYDVVGLTEVFSEEAVK 208

Query: 80  -----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--------- 125
                + K+    T+    S +   +++   +    H  +    + ++ +          
Sbjct: 209 EVVAQLNKLAGSGTYSYVASKKLKGSYAG--NLQAEHVGVIYNSQKIKTIPFEKTKNNKK 266

Query: 126 -------QSYPLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLEN 175
                  + +     K        R    +  +      +    +  H  S         
Sbjct: 267 EIGYSYIEKFNSEFIKKHNKAEYVRPPYGVKFQWLKGKKEDFTFVFDHFDSPGGSKGEGT 326

Query: 176 TYSPSCSLL--SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           T       L  ++Q   + D   +          +GD N  I        F + +     
Sbjct: 327 TSGVGNQELAEARQLANVLDHFDEIDGENEDIFFSGDTN--IKAGKEKFAFGEELFKKYQ 384

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291
                  + +     K      P D     +  +K      +     ++DD  +   +  
Sbjct: 385 SAFKDNLEFATSLGIKAGNYSQPYDKMF-TKTKFKTSNHGIYKLWDLSKDDEFTNLFKEL 443

Query: 292 -------------LSDHCPISIDYDF 304
                        +SDH PI  + +F
Sbjct: 444 HNGKIETSEIRKLVSDHAPIYSEVEF 469


>gi|224014594|ref|XP_002296959.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968339|gb|EED86687.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1013

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/366 (10%), Positives = 88/366 (24%), Gaps = 88/366 (24%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL-----------LRQYAKNLDADIV 69
               +R+V++NI            +++  R  S               +        ADI+
Sbjct: 654  PSSLRVVTYNILADQNASRDVEKQDASDRMYSHCKNEHIVKWRRHPLIVHELLEYSADII 713

Query: 70   FLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHS-----------------------K 103
             LQE+ +    N +        +  +YS + +   S                       +
Sbjct: 714  CLQEVDTDVFYNLLQPALKAKGYQGYYSQKGVGATSSVQEGCAILWSLNTFESVRIPDMR 773

Query: 104  RDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--------KDSFSRAGNRRAVELLVEINGK 155
              +  D+    +  ++  +   +S   +          K             +++   G 
Sbjct: 774  THTFRDMFVQFSCDERMHKSQWKSLRDMSDLLDRHDHLKHVLFNKLGHVLQTVVLTQRGS 833

Query: 156  KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
               V+  +   F    +              Q +     I   +  + P V  GDFN   
Sbjct: 834  GEQVVVGNTHLFFHPLASHIRCLKMLIACR-QLE-----IESHEHQMSPIVFCGDFNSHP 887

Query: 216  NYLGNNDDFWKTIDPNDSLIRFP------------------------------------K 239
            N         + +D N+                                           
Sbjct: 888  NSGVMKLLLNRHVDSNNGSTWKHLCTYQWKEGGATGKLRRDVEAIHLELPPSFPKLLSGY 947

Query: 240  EKDSRCNANKNLRNKIPIDYFVMDQNAY-KFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +       +        +DY ++ +N      +  +                  SDH  +
Sbjct: 948  QNALPEFTHFIEAFVCTLDYILVTENFACDMKVAPTMLMDDVKRYVAMPNEVMPSDHISL 1007

Query: 299  SIDYDF 304
            + D  +
Sbjct: 1008 ACDLVW 1013


>gi|329851089|ref|ZP_08265846.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis
           biprosthecum C19]
 gi|328839935|gb|EGF89507.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis
           biprosthecum C19]
          Length = 310

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 59/253 (23%), Gaps = 66/253 (26%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             L  + +  + DIV L E  +  A  ++                              +
Sbjct: 113 EKLLPWVEKQNPDIVALIEA-NPAARDELIKGLKATR--------------PYVATRYDM 157

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            V  +              K    R      + + VE  G+   +   HL         +
Sbjct: 158 VVVSRYPL-----------KRPSPRQAGLALMTVEVESPGQPFTLAVTHLTRPWPFSDPQ 206

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
           +           Q   L   + +  +     V+ GDFN      G  D   +        
Sbjct: 207 DQRR--------QFSRLARSLERIADED--LVLVGDFNTPPCASGMGDFMDE-------- 248

Query: 235 IRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                   +               +I ID  +   +                    +  G
Sbjct: 249 ---TGLHAAPMWRGTWPSFLPSVLRIGIDNLLASPD--------------RVLSRRQVGG 291

Query: 290 KRLSDHCPISIDY 302
              SDH P+ +D 
Sbjct: 292 FTGSDHRPVVVDI 304


>gi|134078839|emb|CAK45898.1| unnamed protein product [Aspergillus niger]
          Length = 477

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/340 (12%), Positives = 75/340 (22%), Gaps = 76/340 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ + N   L       + K+   R       L     +   +IV LQE  +      +
Sbjct: 18  IRIFTLNCWGL-----KYIAKHRHARLAEIGRQLA--IASPPPEIVGLQECWTQQDYESI 70

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFS 138
                      T  ++ + K          +A+  K        +         A     
Sbjct: 71  RQ--------QTRHILPYGKFYFGGIWGAGLAILSKWPIEESSMFAYPLNGRPTAFFRGD 122

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +      V        V ++           E   S  C   + QA  +   +   
Sbjct: 123 WYVGKGVACARVRFGPGVQDVAEVFCTHLHAPYEREPNDSYIC-HRTAQAWEIAKLMRGA 181

Query: 199 KESLVPFVIAGDFNRKINY--------LGNNDDFWKTIDPNDSL---------------- 234
            E     +  GDFN   +              D W+ + P+ S+                
Sbjct: 182 AERGHLVIGLGDFNMLPSSFAHQLIQAHSPVRDAWQVLHPDSSVGAAIDPVEQKRGKPIP 241

Query: 235 --------IRFPKEKDSRCNANKNLRNKI-------------------PIDYFVMDQNAY 267
                        +             K                     +DY  +    Y
Sbjct: 242 SAEYNITENGATCDGKFNTWRWSKEDQKRLEKGQDIVVDKDAPCPKGKRLDYIFVGDGNY 301

Query: 268 KFLIQESFSEILYN----EDDIKSRGKRLSDHCPISIDYD 303
             L       +        +   +    LSDH  +     
Sbjct: 302 PPLYPAPRWSVESTRLSMTERHPTLRCSLSDHFAVEAVIT 341


>gi|331011356|gb|EGH91412.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 262

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 58/171 (33%), Gaps = 27/171 (15%)

Query: 21  AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            Q +++++WNI  L+                  + + +    +   + +  ++   DIV 
Sbjct: 69  GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128

Query: 71  LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LQ +                   VA ++P +T   ++ +E + N     S      A   
Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGS-VGRKLATLS 187

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLK 165
           R       +   P+  A     +   + A+ +      +G K+ V++  L 
Sbjct: 188 RFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLT 238


>gi|77412876|ref|ZP_00789080.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae 515]
 gi|77161016|gb|EAO72123.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae 515]
          Length = 276

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 74/280 (26%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST---------------- 95
                L ++      DI+ LQE+    +         +     T                
Sbjct: 24  KKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYL 83

Query: 96  ------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+       L+    L+ A D  +    RRA+   
Sbjct: 84  NLQGLHYHWTWAYNHIGYSKYHEGVAILSLKP--LKPEDILVSAVDDETDYHTRRALVAE 141

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             +N K + V+ +HL  F                    A+  K   T   E   P ++ G
Sbjct: 142 TTLNDKVVTVVSLHLSWFEKG----------------FAEEWKRLETTLLEVETPLLLMG 185

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        +   DS                 +  +  +  + +D+    +
Sbjct: 186 DFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSE 245

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +      Q  F                +SDH  + I  DF
Sbjct: 246 DLSISSSQVVFEGGEAPV---------VSDHYGLEITMDF 276


>gi|229580822|ref|YP_002839221.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.N.15.51]
 gi|228011538|gb|ACP47299.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.N.15.51]
          Length = 247

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 73/303 (24%), Gaps = 79/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VSWN+N +                 +    L  + +N   +++  QE         +
Sbjct: 1   MKIVSWNVNGIRA---------------ALKKNLIDFIENNMFEVIMFQETKG-----DI 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +   + Y                 ++ +    K   +       +   D   R    
Sbjct: 41  VPLDFIMMGYEVISFPAK------RKGYSGVMTLTKIKPINVIKGLQIKEFDDEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V +  K  +V++ +           +      + +      L+           
Sbjct: 91  -----TVTLELKDFYVINAYFPRAGDNLERLDFKLKFNNEIENFVLKLRK--------AK 137

Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           P ++ GDFN     +                   F   +      I   +          
Sbjct: 138 PVILCGDFNIAHQNIDGAFSNPTIPGLTPQERSWFSHFLSLG--FIDTFRYLHPNVRKYS 195

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +DY ++ +     +                    + SDH PI +
Sbjct: 196 WWSYMGKARDKNLGLRLDYCIVSEELKDRIKMADILI-----------DIQGSDHAPIIL 244

Query: 301 DYD 303
           +  
Sbjct: 245 ELT 247


>gi|89074806|ref|ZP_01161260.1| putative exported phosphatase [Photobacterium sp. SKA34]
 gi|89049381|gb|EAR54943.1| putative exported phosphatase [Photobacterium sp. SKA34]
          Length = 436

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 76/326 (23%), Gaps = 59/326 (18%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           + C  +     + +SWN+ T   +    L  +           + +    ++ D+    E
Sbjct: 109 LICQQAQNTAFKALSWNLWTGPGEGTPELKDH--------IKRVVEDIAAINPDVFLSIE 160

Query: 74  MGSYNAV-------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                A        A   P      +  T                  +AV  K   +   
Sbjct: 161 TYGKGAAIQEAMAKANHVPVEDIHYYTITCNNPADQSSCQRGKGIDNLAVFSKYEIID-S 219

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--------- 177
                    +F+  G +  VE       + +WV+D  L     ++   + Y         
Sbjct: 220 FIYNGKTVGNFNVGGVKINVENKKTGIKQPVWVIDTWLHYKDDIEKPLDDYYLAKRDGTP 279

Query: 178 ------SPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTID 229
                     +    QA+ + + I     +    P ++ GD N   +             
Sbjct: 280 LPESPVKTDENYRLPQAKEIIEVIEPLLSNADDTPIILGGDHNTVSHLDFAKKWKKAHYG 339

Query: 230 PNDSLIRFPKEKDSRC-------------NANKNLRN-------KIPIDYFVMDQNAYKF 269
                       D+                   +             IDY    + A   
Sbjct: 340 VVLPFKVSKVFTDAGFKDSYREIHPNPILYPGSSWSPMNRTSDAPQRIDYIYY-KGAKLQ 398

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDH 295
                  +         +     SDH
Sbjct: 399 ATDSVMVDSPRAGFSHLT-----SDH 419


>gi|323473589|gb|ADX84195.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus REY15A]
          Length = 247

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 73/303 (24%), Gaps = 79/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VSWN+N +                 +    L  + +N   +++  QE         +
Sbjct: 1   MKIVSWNVNGIRA---------------ALKKNLIDFIENNMFEVIMFQETKG-----DI 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +   + Y                 ++ +    K   +       +   D   R    
Sbjct: 41  VPLDFIMMGYEVISFPAK------RKGYSGVMTLTKIKPINVIKGLQIKEFDDEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V +  K  +V++ +           +      + +      L+           
Sbjct: 91  -----TVTLELKDFYVINAYFPRAGDNLERLDFKLKFNNEIENFVLKLRR--------AK 137

Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           P ++ GDFN     +                   F   +      I   +          
Sbjct: 138 PVILCGDFNIAHQNIDGAFSDPTIPGLTPQERSWFSHFLSLG--FIDTFRYLHPNVRKYS 195

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +DY ++ +     +                    + SDH PI +
Sbjct: 196 WWSYMGKAREKNLGLRLDYCIVSEELKDRIKMADILI-----------DIQGSDHAPIIL 244

Query: 301 DYD 303
           +  
Sbjct: 245 ELT 247


>gi|313127359|ref|YP_004037629.1| endonuclease/exonuclease/phosphatase family protein
           [Halogeometricum borinquense DSM 11551]
 gi|312293724|gb|ADQ68184.1| endonuclease/exonuclease/phosphatase family protein
           [Halogeometricum borinquense DSM 11551]
          Length = 471

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/359 (10%), Positives = 90/359 (25%), Gaps = 80/359 (22%)

Query: 10  VFFLVPCTASVAQ----KVRLVSWNI---------------NTLSEQEGVSLWKNSVKRT 50
           +   VP   +  Q    ++ + + N+               + L+   G           
Sbjct: 23  LGLTVPSVGAADQSRSTELTVATRNLGLGANLFALFLVESSDELARTIGDLYMDIERSAP 82

Query: 51  TSDYTLLRQYAKNLDADIVFLQE----------------MGSYNAVAKVFPKNTWCIFYS 94
           ++    +         D+V +QE                + +         + T  +  +
Sbjct: 83  SARMRAIADELARTRPDVVGVQEAALIRTETPGDGGEDGLDAEAVSFDFLDELTAALDET 142

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----------------------L 131
                    + + +     +   ++    L                             +
Sbjct: 143 GTPYEVAQVKTTADAEFPGLVDDERIDVRLTDRDVFLVRSDADVTVSDSSAGTFDEALEI 202

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              D  +    R    +    +G++   ++ HL++             S S+   QA  L
Sbjct: 203 PVGDDRTFRVERGYGVISATADGREFTAVNTHLEA------------SSESVRGSQADEL 250

Query: 192 KDWITQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
              +          V+ GD N    Y  G  +     +       R   +  + C +   
Sbjct: 251 ASVLDDIDGRT---VLLGDLNDGPAYKNGAYETLTSNLADAWKQARSDADGFTCCRSATL 307

Query: 251 LR---NKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    +D+ ++          LI       L+   +  SR    SDH  +    +
Sbjct: 308 DGEESMPKRVDHVLVRSGVAATDAKLIGAGAESRLHTTVNGSSRTLWPSDHAGVVATLE 366


>gi|198425288|ref|XP_002119497.1| PREDICTED: similar to Phosphodiesterase 12 [Ciona intestinalis]
          Length = 627

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/329 (10%), Positives = 90/329 (27%), Gaps = 45/329 (13%)

Query: 20  VAQKVRLVSWNI-------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
                R+V +NI          + +E      + + +      L+++  +    D++ LQ
Sbjct: 299 SGDTFRMVCFNILADCYATQDFARKELFPYCPDDIIKMDYRIQLIQKELEGYHGDLICLQ 358

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+  +     +    +   F                  +      +  +N  + +     
Sbjct: 359 EVDRFVFENHLVSSMSLQNFAGALATKKQCKEGVAVFYNRDRFKLISVENKILQESLTTD 418

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWV-----LDIHLKSFCFLDSLENTYSPSCSLLS 185
              KD   +    ++++  V   G  + +     +D   +     ++    +  + ++  
Sbjct: 419 EVNKDLLEKVSRNQSLKSSVLQRGSCVLLAVLQSVDAPHRHLVLANTHLFWHPRALNIRL 478

Query: 186 QQAQWLKDWITQKKESLVPF---------VIAGDFNRKINY------------LGNNDDF 224
            Q   + + + +K ++             +I GD N K                 + D +
Sbjct: 479 IQMGIILNLVKEKMKTTSASLPEGGVVTPIICGDLNSKPASGLCDLMQDGNIPTNHADWY 538

Query: 225 WKTIDPNDSLIR-------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLIQESF 275
              I               F          N        +DY  +D      K ++    
Sbjct: 539 SGGITNYHGGDWSLSHDMKFVSACGKPTYTNYVTGFSDCLDYIYIDPRMLGIKQVVPHPP 598

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             ++             SDH    +D  +
Sbjct: 599 HHLV-TMHTAIPCVTSPSDHIAQVVDLGW 626


>gi|308811921|ref|XP_003083268.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
 gi|116055147|emb|CAL57543.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
          Length = 666

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 74/260 (28%), Gaps = 34/260 (13%)

Query: 22  QKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +R++++NI   +           + + + +      L+ Q     +AD+V LQE+   
Sbjct: 199 GDLRVMTYNILADAYSHTWQTMFPYFADDLAKAERRLQLVLQDILEAEADVVALQEVDKK 258

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                  P      + ST+      +    + I        K   + +Q   L    D+ 
Sbjct: 259 WHELLFEPVLASRGYVSTDWCGKSGQTMEGSAI---FFRSSKFTILEEQVIKLNETSDTQ 315

Query: 138 SRAG----------------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            +                     A  + V+    +  +   +   F    ++      + 
Sbjct: 316 MKRFILDDENYELANALAKITTVAQLVKVKDKSTQREMCVGNCHLFFHPGAMHIRIIQAH 375

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            LL  QA    D          P ++ GDFN +             I   DS     +  
Sbjct: 376 ELL-TQATAFAD--------GGPLMLCGDFNGEPEDGVIRYISKGKISAADSDWI--RGS 424

Query: 242 DSRCNANKNLRNKIPIDYFV 261
             R     +      + Y +
Sbjct: 425 LFRWGGTSSREAARSLYYIL 444



 Score = 45.3 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 17/61 (27%), Gaps = 1/61 (1%)

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN-EDDIKSRGKRLSDHCPISIDY 302
               N        +DY      A++         +    +          SDH P+ +D 
Sbjct: 604 PEWTNYVGGFVGALDYVWCSSEAFRPRNFAPLPPMSAVLQSTALPNAVFPSDHIPVVVDV 663

Query: 303 D 303
           D
Sbjct: 664 D 664


>gi|282897120|ref|ZP_06305122.1| Exodeoxyribonuclease III xth [Raphidiopsis brookii D9]
 gi|281197772|gb|EFA72666.1| Exodeoxyribonuclease III xth [Raphidiopsis brookii D9]
          Length = 221

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/205 (10%), Positives = 64/205 (31%), Gaps = 39/205 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN+N                   +    +  +    + D++ LQE      + + 
Sbjct: 1   MKIATWNVN----------------SIRTRLEQVISWLGENNVDVLCLQE---TKVIDRD 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAKDSFSRAG 141
           FP   +           +         +  +A+  +       +    +L   +      
Sbjct: 42  FPLTVFHDV-------GYHTYIYGQKAYNGVALISRQPMKSVSTGFCQVLENLEPEWDDQ 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R    ++      ++ ++++++ +   + S +  Y        Q    LK ++    +S
Sbjct: 95  KRVITGIV-----DEVRIINLYVPNGSAVGSEKYQYK------LQWLAVLKTYLEVLLKS 143

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWK 226
               ++ GDFN  +  +        
Sbjct: 144 NSHIIMCGDFNIALEDIDIYKQVDT 168


>gi|146185259|ref|XP_001031429.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|146142871|gb|EAR83766.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 279

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 86/287 (29%), Gaps = 50/287 (17%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFP 85
           ++NI              +  R       LR+  +   +DI+ LQE+     N V  +  
Sbjct: 12  TFNIRN------------TQDRYNERKEFLRKTIQGEQSDIMCLQEVSFLGDNQVDHLVE 59

Query: 86  KNT----WCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +     +  F++  +L  H +  ++ +       +        Q    L   K     +
Sbjct: 60  DDKNRSLYHQFHAESQLKFHIRPGADPESKLDGNTILANKDFFDQNLTILEDKK--MHLS 117

Query: 141 GNRRAVELLVEINGKK---IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           G R A  +   +NG      WV++ HL                  +   Q Q +  W+  
Sbjct: 118 GFRVAHAIKFALNGDPSNYFWVVNTHLHHIVPD----------WQIRYHQLQNIHLWLYN 167

Query: 198 KKE-SLVPFVIAGDFNRKINYLGNNDDF--------WKTIDPNDSLIRFPKEKDSRCNAN 248
             +       + GDFN       N            ++ I   + +I FP    +    N
Sbjct: 168 ITKFQSDNIFLCGDFNLTPKEEQNYKYLSEMGFKSTYQVIHGQEPVITFPTGLQA---PN 224

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +   +   DY     N  K      F +     D         SDH
Sbjct: 225 MDTDPEGCFDYIWFKGNQIKPQNIHIFGDKHLETDKTI----YPSDH 267


>gi|332529941|ref|ZP_08405892.1| exodeoxyribonuclease III Xth [Hylemonella gracilis ATCC 19624]
 gi|332040638|gb|EGI77013.1| exodeoxyribonuclease III Xth [Hylemonella gracilis ATCC 19624]
          Length = 265

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 74/265 (27%), Gaps = 40/265 (15%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  + +    D + +QE+ +      V  K                   +    ++ +AV
Sbjct: 20  LEAWLEKTRPDCICVQEVKAQA--PDVAGKFEQLAGLQGH------FHYAEKKGYSGVAV 71

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             K+         L+G       A  R  VEL  +   +K+ ++  +  S    +  +  
Sbjct: 72  YTKHAPSDV----LIGYGSPEFDAEGRW-VELRYDTPKRKLSLISCYFPSGSSGEDRQQA 126

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN----- 231
                  +    Q L+            F++ GD N     +   +      +       
Sbjct: 127 KFRFLDEMWAHLQSLR--------GQREFILCGDVNIAHKEMDLKNWKGNLKNSGFLPEE 178

Query: 232 --DSLIRFPKEKDSRCNANKNLRNKIPID--YFVMDQNAYKFLIQESFSEILYNE----- 282
                     ++    +  + L     ID  Y         +     +    +       
Sbjct: 179 RAWMTKLLDPQQGGLVDVYRTLE-PEAIDTAYTWWSNRGQAYAKNVGWRIDYHLATPALA 237

Query: 283 ----DDIKSRGKRLSDHCPISIDYD 303
                    + ++ SDH P+S+ YD
Sbjct: 238 ALARQTGVYKDEKFSDHAPLSVRYD 262


>gi|315636836|ref|ZP_07892061.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22]
 gi|315478890|gb|EFU69598.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22]
          Length = 526

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/342 (13%), Positives = 99/342 (28%), Gaps = 84/342 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKN----------SVKRTTSDYTLLRQYAKNLDADIVF 70
              +++ S+N+    +        N          + K        L +   ++DADI+ 
Sbjct: 20  GSNLKIASYNVENFFDLSYDKSEYNEFIPNNNSLWNQKNFNVKLNNLIKVIDDIDADIIG 79

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ + + +  +  K     ++S  +  + +           +    K       S  +
Sbjct: 80  LQEIENKDLMQLLQKKLPKYKYFSFIKYPDSA---------VGLGFLSKVEIKNSSSIDV 130

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                 F+    R  +E        +  + + H  S           + + +   + A+ 
Sbjct: 131 -----KFTDKLFRPILETTFIYENIEFKIFNNHWPS----------KAAAENYRIKYAKT 175

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND-- 232
           L+D +  K      +++ GDFN   N                  G N      ID +   
Sbjct: 176 LQDRL-LKLPKDYDYILLGDFNSNYNEFETFKKDLKLNLTSGVTGINHVLNTIIDDHFIT 234

Query: 233 -----------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF----LIQESFSE 277
                          +   K S   + K        D  ++  + +       I++SF  
Sbjct: 235 YDDILKEEKKVHYNLWLDIKTSERFSTKFKNQNNTPDNIILSSSLFDNKNLTYIKKSFEV 294

Query: 278 I----------------LYNEDDIKSRGKRLSDHCPISIDYD 303
                              + +    +G+  SDH PI   + 
Sbjct: 295 FKPNYLYENGEVKRWKMTQDRNIKIHKGEGFSDHLPIFAKFS 336


>gi|167909082|ref|ZP_02496173.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 112]
          Length = 270

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 77/306 (25%), Gaps = 66/306 (21%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +     VA ++  VSWN++      G + W             +R +  +  AD+ FLQE
Sbjct: 9   LAEPLPVADEITAVSWNLHKGRSPLGFTAW-----------EAMRSWVVSTHADVYFLQE 57

Query: 74  MGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
             +                   V  ++      I  + +  I               A+ 
Sbjct: 58  AMARRMPRPVLAAGFGAPMAEPVDDIWHCQATEIARALDWQIALGPNVFKPSWRHGNAIL 117

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENT 176
             +   L   + +        R   R  +        G  + +L  HL            
Sbjct: 118 SPHPLDLGGRWDISA-----HRFERRGLLVARATLAGGAPVTLLCAHLALT--------- 163

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                +   +Q  W+  WI +   +  P V+AGDFN   N           +     L  
Sbjct: 164 ----RAARLRQMHWIAHWIERNARTG-PLVLAGDFNDWRNDSIP-------LFGEIGLSE 211

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                             + +D   +                             LSDH 
Sbjct: 212 VATLLGESGRTFPAFSPALALDKMFVRGMTPLEWRAPG------------DETAWLSDHL 259

Query: 297 PISIDY 302
           P     
Sbjct: 260 PYVARL 265


>gi|57012651|sp|Q46669|CDTB_ECOLX RecName: Full=Cytolethal distending toxin subunit B; Short=CDT B;
           AltName: Full=Deoxyribonuclease CdtB; Flags: Precursor
 gi|436946|gb|AAA18786.1| CdtB [Escherichia coli]
          Length = 269

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 107/304 (35%), Gaps = 43/304 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++KY+++L+ FL     +     R+ +WN+   S         N           +RQ  
Sbjct: 1   MKKYIISLIVFLSFYAQADLTDFRVATWNLQGASATTESKWNIN-----------VRQLI 49

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              +A DI+ +QE GS  + A            +   + +          + +   R + 
Sbjct: 50  SGENAVDILAVQEAGSPPSTA----------VDTGTLIPSPGIPVRELIWNLSTNSRPQQ 99

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVEL----LVEINGKKIWVLDIHLKSFCFLDSLENT 176
           V +   +   LG + + +   NRRA E+     V   G+ +  + I   +F    ++   
Sbjct: 100 VYIYFSAVDALGGRVNLALVSNRRADEVFVLSPVRQGGRPLLGIRIGNDAFFTAHAIAMR 159

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + + +L+ +   + +D         + ++I GDFNR+   L  N             + 
Sbjct: 160 NNDAPALVEEVYNFFRDS-RDPVHQALNWMILGDFNREPADLEMN-----------LTVP 207

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             +  +    A     ++  +DY V   +            +         R +  SDH 
Sbjct: 208 VRRASEIISPAAATQTSQRTLDYAVAGNSVAFRPSP-----LQAGIVYGARRTQISSDHF 262

Query: 297 PISI 300
           P+ +
Sbjct: 263 PVGV 266


>gi|55620521|ref|XP_516558.1| PREDICTED: similar to DNase1-Like III protein isoform 5 [Pan
           troglodytes]
          Length = 275

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 84/281 (29%), Gaps = 52/281 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N   ++
Sbjct: 21  LRICSFNVRSFGE---------SKQEDQNAMDVIVKVIKRC--DIILVMEIKDSN--NRI 67

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P                              + ++ +  +++SY     +D  +   +R
Sbjct: 68  CPILMEK-------------------------LNREKLVSVKRSYHYHDYQDGDADVFSR 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +     +    I                 S   + +  +   D   + K    
Sbjct: 103 EPFVVWFQSPHTAVKDFVIIPLHTTPET--------SVKEIDELVEVYTDVKHRWKAEN- 153

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
            F+  GDFN   +Y+         +  +   +    +++              I   +  
Sbjct: 154 -FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRI--VLRG 210

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
           Q     ++ +S S   + +    +  + L  SDH P+    
Sbjct: 211 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 251


>gi|71904339|ref|YP_281142.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180]
 gi|71803434|gb|AAX72787.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180]
          Length = 279

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 79/307 (25%), Gaps = 65/307 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++++ N +                 T      L ++      DI+ LQE+          
Sbjct: 10  KVLTLNTH-----------SWMQANTLKKLVALAEHILAEKYDIICLQEINQLIESELAT 58

Query: 85  PKNTWCIF----------------------YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
               +                                        +     +A+  K   
Sbjct: 59  DLPRYQALSGTPNIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPI 118

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L+ A    +    RR++     ++GK++ V+++HL  F               
Sbjct: 119 --HVSDILVSAMADETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKG------------ 164

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                    +    +      P ++ GDFN   +  G        +D  DS         
Sbjct: 165 ----FLGEWEKLEKELLTLNCPLLLMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFG 220

Query: 243 SR---CNANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 + +    NK  +  D+    ++      + +F                +SDH  
Sbjct: 221 DHSIVADIDGWQGNKEALKVDHVFTSKDFIIRSSKITFE---------GGDAPVVSDHYG 271

Query: 298 ISIDYDF 304
           + +   +
Sbjct: 272 LEVTLGW 278


>gi|45199199|ref|NP_986228.1| AFR680Wp [Ashbya gossypii ATCC 10895]
 gi|44985339|gb|AAS54052.1| AFR680Wp [Ashbya gossypii ATCC 10895]
          Length = 461

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 98/336 (29%), Gaps = 73/336 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QY 60
           +S+   VR ++ N   L       + K   +R  +    L                   Y
Sbjct: 20  SSIQSTVRFLTLNTWGL-----KYVSKFRQERLCAIADKLAGYDNFLQLVDYRDVSDSNY 74

Query: 61  AKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               DAD   +V LQE+        +  +          R   H    S       +A+ 
Sbjct: 75  TPEEDADEYDVVALQEVWCKKDWDYIVDR-------CKGRYPYHRWFLSGIVAGPGLAIL 127

Query: 118 KKNVRVLQ--QSYPLLGAKDSFSRAGNRRAVELLVE------INGKKIWVLDIHLKSFCF 169
            K          +P+ G   +F R        + +        N   + +++ H+ +   
Sbjct: 128 SKIPIESTFLYRFPINGRPSAFWRGDWYVGKSVSITLLRPTGPNAAPLCIMNSHMHAPYG 187

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------- 221
           LD             + QA       +  ++S    VI GD N +   L           
Sbjct: 188 LDG----DEAYECHRACQAWDFSRLASVYRKSGYAVVIVGDLNSRPGSLPYKLLTHETGL 243

Query: 222 DDFWKTIDPNDSLIRFPKEKD------------SRCNANKNLRNKI---PIDYFVMDQNA 266
           +D W+ ++    L    +               S  N  +  R       +DY ++D + 
Sbjct: 244 EDSWEQLNGEQDLQYIARLLPMDQIKYGGVTCNSTLNTWRADRGPQEACRLDYALVDPDR 303

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +        +   + I + G   SDH   S  +
Sbjct: 304 LETIKAS-----VRFTERIPNVGS-FSDHFGYSCTF 333


>gi|118097495|ref|XP_414612.2| PREDICTED: similar to CCR4-NOT transcription complex, subunit 6
           [Gallus gallus]
          Length = 563

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/344 (10%), Positives = 90/344 (26%), Gaps = 71/344 (20%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   + +ADI+ LQE+ +    +
Sbjct: 195 FSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEILSCNADIISLQEVETEQYYS 254

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
               +     +       + ++  S  +       AI  + +   ++Q+           
Sbjct: 255 FFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMA 314

Query: 138 SRAGNRRAVELLVEINGKKIWV------------------------LDIHLKSFCFLDSL 173
           +  G+   +  ++  +   + V                        + +      +    
Sbjct: 315 NSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGMEKQLVLVANAHMHWDPDY 374

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV-------PFVIAGDFNRKINYL-------- 218
            +       +   + + + D  ++  +  V       P V+  D N   +          
Sbjct: 375 SDVKLVQTMMFLSEVKNIIDKASRSLKPGVAGELGTIPLVLCADLNSLPDSGVVEYLSTG 434

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKI 255
               N   +K +  N+SL  F     +                         N     K 
Sbjct: 435 GVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKG 494

Query: 256 PIDYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHC 296
            IDY            I          E++I         SDH 
Sbjct: 495 IIDYIFYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHF 538


>gi|302663524|ref|XP_003023404.1| hypothetical protein TRV_02506 [Trichophyton verrucosum HKI 0517]
 gi|291187398|gb|EFE42786.1| hypothetical protein TRV_02506 [Trichophyton verrucosum HKI 0517]
          Length = 304

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 73/266 (27%), Gaps = 23/266 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVAK 82
            R+++ NI   +             R       L  Y   L+ +  V LQE         
Sbjct: 8   FRILTHNIRYATTSPSAGEQP-WSVRAPHIVNEL-DYHSRLNPESFVCLQEALHNQVNDV 65

Query: 83  VFP--------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           +           + W  +         +   S      A+   ++   V     P + +K
Sbjct: 66  LAGLNARPHAQADEWAFYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPSVPSK 125

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             +  A  R     +         VL ++       D    +   S  L+      ++ +
Sbjct: 126 -GWDAASIRIVTIGVFNHRASNTTVLAMNTHL---DDQGSKSRLESAKLI---LSLIQKY 178

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANKN 250
           + +    +    +AGDFN   +     +         D+  + P       +        
Sbjct: 179 LARH-PEVKGNFLAGDFNSAESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFDG 237

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFS 276
                 IDY ++   +    I  + +
Sbjct: 238 KTKGSRIDYVMVGPQSSSASIPFTVN 263


>gi|163734486|ref|ZP_02141926.1| hypothetical protein RLO149_09579 [Roseobacter litoralis Och 149]
 gi|161392494|gb|EDQ16823.1| hypothetical protein RLO149_09579 [Roseobacter litoralis Och 149]
          Length = 280

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/307 (9%), Positives = 77/307 (25%), Gaps = 76/307 (24%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T    + +R++SWN+   +                 D   +      L+ DI   QE+  
Sbjct: 29  TGPEKKPLRVLSWNVFNENP----------------DAARIADALTALNPDIALFQEVL- 71

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                         +  ++   ++ ++  +       + +  +     +           
Sbjct: 72  ---------PAHIAVIKASFPYVSVARDYALKGELCHLVIASRFPTRRETILFHSDTSKP 122

Query: 137 FSRAGNRRAVELLVE---------INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 R A  +               +   V+++H  +     + +   + + S    +
Sbjct: 123 APTRWARHAGWVEFLDSLSVDVVVPGARPFRVVNLHTSAGVSPSARQAELAETQSHFDCE 182

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRK-----------INYLGNNDDFWKTIDPNDSLIR 236
                           P ++AGDFN               +    D          +   
Sbjct: 183 ---------------GPCLVAGDFNSYAVPWLAPLLAIPLHYRPKDWLI-FERRALNSWF 226

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             +      +     + ++ +D                 +      +         SDH 
Sbjct: 227 QRQGFAPAVHGVTFPKFRLQMDQLFTRD----------ITVETAVIERRL----WGSDHR 272

Query: 297 PISIDYD 303
           P+S++ +
Sbjct: 273 PLSLEIN 279


>gi|154274920|ref|XP_001538311.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150414751|gb|EDN10113.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 492

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 76/333 (22%), Gaps = 71/333 (21%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           NI TL+      + +   +R       +          IV LQE  S          +  
Sbjct: 14  NILTLNCWGLKYISEYRRERLIEIGKRIA--LSENTPHIVGLQECWSRE--------DYH 63

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144
            I   T  ++ + K   +      +A+  K        +         A         + 
Sbjct: 64  NIRRETREILPYGKFYFSGIFGGGLAILSKWPIEESTMHTYPLNGRPSAIFRGDWYVGKG 123

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + I      ++D+           E   S  C   + QA  +   +    E    
Sbjct: 124 VACARIRIGPAAADIVDVFCTHLHAPYEREPRDSYIC-HRTAQAWEIAKLMKAAAEKGHL 182

Query: 205 FVIAGDFNRKI--------NYLGNNDDFWKTIDPNDSL---------------------- 234
            V  GDFN                  D W  + P+ S+                      
Sbjct: 183 VVGLGDFNMLPQSFAHRLITSHAPVKDVWGYLHPDSSIGAAIDSAEMNRKKPVPSADFNI 242

Query: 235 --IRFPKEKDSRCNANKNLRNKI-------------------PIDYFVMDQNAYKFLIQE 273
                  +           + K                     +DY  +   ++      
Sbjct: 243 SENGATCDSILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNPPPL 302

Query: 274 SFSEILYNEDDIKSRGKR----LSDHCPISIDY 302
              +I      +  R       LSDH  +    
Sbjct: 303 RKWDIESARVCMLERHPHLHCSLSDHFGVEATI 335


>gi|209519157|ref|ZP_03267961.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160]
 gi|209500383|gb|EEA00435.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160]
          Length = 265

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 77/292 (26%), Gaps = 65/292 (22%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--------- 77
           VSWN++      G   W             ++++ ++  AD  FLQE  +          
Sbjct: 20  VSWNLHKGRTPLGFQAW-----------QAMQRWVQSTHADAYFLQEAMARRMPSPVLAS 68

Query: 78  -------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                  + +A V+      I  + E  +               A+   +   L   + +
Sbjct: 69  SFGAPMGDTLADVWHCQATEIARALELEVALGPNVFKPSWRHGNAILSPHPLDLGGRWDI 128

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   R   R  +       G+ + +L  HL                     +Q  W
Sbjct: 129 SA-----HRFEKRGLLVARATFGGRLVTLLCAHLALTRP-------------ARLRQMNW 170

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +  WI ++     P V+AGDFN   N           +     L                
Sbjct: 171 IAHWIAKEAPDG-PLVLAGDFNDWRNDSVP-------LFREHGLQEVATLLGEPARTFPA 222

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +D   +        IQ +                 LSDH P     
Sbjct: 223 FSPALSLDKMFVRGMQPVQWIQPT------------QETAWLSDHLPYVAKL 262


>gi|225455870|ref|XP_002275530.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 429

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 22/233 (9%)

Query: 19  SVAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +   +VS+NI    N    ++  S    S  +      ++       + DIV LQE+
Sbjct: 72  PSQETFTVVSYNILGDRNAFKHRDLYSNVPFSYMKWDHRRRVICNEIIGRNPDIVCLQEV 131

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             Y  +  +  K  +          ++ +R  +     A+  + +  R+L+         
Sbjct: 132 DKYFDLVSIMEKEGYA--------GSYKRRTGDTVDGCAMFWKAEKFRLLEGECIEFKQY 183

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E+  E   +K+ V +IH+        ++       S            
Sbjct: 184 GLRDNVAQLSLFEMC-EDESRKLLVGNIHVLYNPSRGDVKLGQIRFLSSR--------AH 234

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           I  +K   VP V+AGDFN              +        R        C+ 
Sbjct: 235 ILSEKWGNVPVVLAGDFNSTPQSA-MYQFLSSSELNIMLYDRRELSGQRNCHP 286


>gi|257058172|ref|YP_003136060.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8802]
 gi|256588338|gb|ACU99224.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8802]
          Length = 340

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 75/305 (24%), Gaps = 64/305 (20%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            L ++L          +R++++NIN                    ++  +    + ++ D
Sbjct: 92  ILPWYLPHTQQGWGYSMRVMTFNIN----------------INNQEWDAIADAVRRVNPD 135

Query: 68  IVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           +  + E  + +  A+                                 + +  +   VL 
Sbjct: 136 VATIMESSVEAKEALRSRLANQL---------------PFVYRASGGGLTILSRFPLVLP 180

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           QS           +      V +        +  L           SL    +   + L+
Sbjct: 181 QS-----------KTFKNGTVLMTFLRVNHHLVHLIAAYPIVPIKPSLFQRRNGFLAELT 229

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              Q          E     +  GDFN              T   N  L    +      
Sbjct: 230 GYVQQQLAQDPIATELKKSLIFLGDFNLTPWSPYYGRLIRATGLHNTRLGFGIEPSWIEA 289

Query: 246 NANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             + +    +      PID+ ++  +                  D K+     SDH  + 
Sbjct: 290 ATHVHYPGWMTAIMKIPIDHILVSSDM--------------KVADCKTAQAANSDHRILW 335

Query: 300 IDYDF 304
            D  F
Sbjct: 336 SDLVF 340


>gi|326385544|ref|ZP_08207178.1| hypothetical protein Y88_1742 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209878|gb|EGD60661.1| hypothetical protein Y88_1742 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 240

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 71/285 (24%), Gaps = 53/285 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKR----TTSDYTLLRQYAKNLDA-DIVFLQEMGSYN 78
           + L++WNI           +     R    T++    L   A+ +   D+V LQE+    
Sbjct: 1   MDLLTWNIQAAIGTRRYRDYLFHAHRQVVHTSAKVVTLGHIAREITPYDVVCLQEIDLGG 60

Query: 79  AVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             A    +       S     +    R          AV  +    L +   L G     
Sbjct: 61  RRAGYRSQVETIAALSGHAHVMVQENRVVPGISRHGNAVLSRWPLHLVRDMKLPG----- 115

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R   R  + + VE     + V  +HL                      Q Q L   +  
Sbjct: 116 -RIPGRGCLIVDVEGPI-SLRVACLHLSLGASA----------------QMQQLHA-VAD 156

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                  +V  GDFN             +                         R +   
Sbjct: 157 MLRKNPAWVAMGDFNCAAASAPMQAFRDRAHGKLPPTSPPTYPS---------WRPRRDF 207

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+ +   +          +               +SDH P+S   
Sbjct: 208 DHIICSADLSLTRYAAGTAI--------------VSDHRPVSAHL 238


>gi|297734177|emb|CBI15424.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 22/233 (9%)

Query: 19  SVAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +   +VS+NI    N    ++  S    S  +      ++       + DIV LQE+
Sbjct: 84  PSQETFTVVSYNILGDRNAFKHRDLYSNVPFSYMKWDHRRRVICNEIIGRNPDIVCLQEV 143

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             Y  +  +  K  +          ++ +R  +     A+  + +  R+L+         
Sbjct: 144 DKYFDLVSIMEKEGYA--------GSYKRRTGDTVDGCAMFWKAEKFRLLEGECIEFKQY 195

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E+  E   +K+ V +IH+        ++       S            
Sbjct: 196 GLRDNVAQLSLFEMC-EDESRKLLVGNIHVLYNPSRGDVKLGQIRFLSSR--------AH 246

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           I  +K   VP V+AGDFN              +        R        C+ 
Sbjct: 247 ILSEKWGNVPVVLAGDFNSTPQSA-MYQFLSSSELNIMLYDRRELSGQRNCHP 298


>gi|238060147|ref|ZP_04604856.1| hypothetical protein MCAG_01113 [Micromonospora sp. ATCC 39149]
 gi|237881958|gb|EEP70786.1| hypothetical protein MCAG_01113 [Micromonospora sp. ATCC 39149]
          Length = 446

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 82/294 (27%), Gaps = 42/294 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +    ++++NI  L E        N    T      +  Y      DIV +QE  +Y+A 
Sbjct: 38  SGGFSVLTYNIAGLPELLSSG---NPATNTRPIGERVNAY------DIVHVQEDFNYHA- 87

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                 + +       R          + ++T           ++  +      D  +  
Sbjct: 88  ------DLYATDRHPYRTPTSGGVPFGDGLNT--MSTYPVSDFVRVRWQDCNGTDCLTPK 139

Query: 141 -GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R  + L     G  +   ++H  +            P+ +        L  +I    
Sbjct: 140 GFTRSRIRL---AEGVYVDFYNVHTNAGS--------DEPNLAARRSNISQLSAYIQAN- 187

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR---------FPKEKDSRCNANKN 250
            +    ++AGD N +    G+N       +    +                   C+    
Sbjct: 188 SAGSAVIVAGDLNVRYTRTGDNIRDLVAANGLTDVWVQQERGGMPPAAGSPALTCDPANV 247

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +D  +   N    L    +     +   +   G  LSDH P +  + +
Sbjct: 248 TNACEVVDKILYRGNRLIDLDFTRYHNEHAS--FLDPAGAPLSDHYPHAAWFSW 299


>gi|219117343|ref|XP_002179466.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409357|gb|EEC49289.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 509

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/333 (12%), Positives = 92/333 (27%), Gaps = 53/333 (15%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD---- 67
            +    +S  +   + ++NI    +++       +  +   D     +  +    D    
Sbjct: 188 VVSSTGSSTPRHFSVATYNIWFGLDRDNGHPHGAARMQAMVD-----ELLRCESPDNPLW 242

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            + LQE+ +      +FP      +    +               A A       VL   
Sbjct: 243 FIGLQEV-TPGLARTLFPALERVGYVVIHQEDAPYGVALAVKQQDA-ADGSPCPVVL--- 297

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKK-------IWVLDIHLKSFCFLDSLENTYSPS 180
               G KD       R  + + V + G +         V   HL+S+      +  Y+ S
Sbjct: 298 --DFGWKDFSRTVMQRGFLFVRVRLPGSENSTTAAQCIVTTTHLESYMPATERDPVYTGS 355

Query: 181 CSLLSQQAQWLKDWITQKKESL---VPFVIAGDFNRKINYLGNND----DFWKTIDPNDS 233
                 Q + ++++  ++          ++ GD N         D     +  +      
Sbjct: 356 EQ-RHLQLEQMQEFCHKEMARHRAVQTVILTGDMNWDDERKTPFDKPLLGYLPSTQNWKD 414

Query: 234 LIRFPKEKDSRCNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                +    +        N +         D  ++  NA +    E  S ++  +  I 
Sbjct: 415 AWLTSQLAKDKGYTYDGKLNPMLGSNLRRRFDRCLVHTNAVEDAATEIISTLMIGKLAIP 474

Query: 287 SRGKR---------------LSDHCPISIDYDF 304
           +   +                SDH  +     +
Sbjct: 475 NLTWQKYNSWKQTYKETPTAPSDHFGLVTQLRY 507


>gi|28198568|ref|NP_778882.1| hypothetical protein PD0660 [Xylella fastidiosa Temecula1]
 gi|28056652|gb|AAO28531.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
 gi|307579699|gb|ADN63668.1| endonuclease/exonuclease/phosphatase [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 246

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 81/287 (28%), Gaps = 61/287 (21%)

Query: 27  VSWNINTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++ NI   S     S +            R   +   + Q A     DIV LQE    + 
Sbjct: 2   LTANIQAASSTRRYSDYVTRSWSHALPIGRKRINLDAIAQLAGER--DIVGLQESDPGSL 59

Query: 80  VAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +    +  +      +       + +          +  R K  ++   + P       
Sbjct: 60  RSGFTNQTCYLAQRAGFHYWSHQPNRRMAGVASSANGLLSRLKPRQIHNHALP------- 112

Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             R   R  +       G   + V  +HL                      Q  ++ D +
Sbjct: 113 -GRIPGRGVLLAKFGNGGFDSLVVAVVHLSLG-------------VRSRMAQLVFIADLL 158

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            +   +    ++ GDFN + +       + +T      ++              + R + 
Sbjct: 159 AEYPNT----ILMGDFNCRADCSEMQVLYRRTRLQPPGVVIPT---------FPSWRPER 205

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID+ ++ +              +   + + +     SDH  +S+D 
Sbjct: 206 AIDHILVSEGF-----------YICKTEAVPAA---FSDHLAVSMDL 238


>gi|167628004|ref|YP_001678504.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167598005|gb|ABZ88003.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 258

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 91/303 (30%), Gaps = 72/303 (23%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N N +        W               ++    D D + +QE  +     +   +
Sbjct: 1   MTFNANGIRAAARKGFW---------------EWFTTQDVDFLCIQETKAQFHQLEKDEQ 45

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
           +    +Y       +  +D+    ++  A+  K   +       L   D   R       
Sbjct: 46  HFPDGYY-------YDFKDAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRY------ 92

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
              ++ + +   +  ++L S    D  +           Q  +  K+ + ++ ES   F+
Sbjct: 93  ---IQFDYENFSIASLYLPSGSSGDVRQ-------EYKMQFLEKYKEILKEQTESGRDFI 142

Query: 207 IAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + GDFN     +   +                 +   I  +   +   +  +        
Sbjct: 143 VCGDFNIVHKEIDIKNWKSNYDKTSGVLPEEQAWLDHIFDDLGWVDTFRVINHEPLQYTW 202

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             N+           IDY +        ++ ES         D   +    SDH P++I 
Sbjct: 203 WSNRGQARANNVGWRIDYHISTPALKDKVVPES---------DYVYKENWFSDHAPLTIS 253

Query: 302 YDF 304
           YD+
Sbjct: 254 YDY 256


>gi|25011983|ref|NP_736378.1| hypothetical protein gbs1945 [Streptococcus agalactiae NEM316]
 gi|24413526|emb|CAD47604.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 271

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 74/280 (26%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST---------------- 95
                L ++      DI+ LQE+    +         +     T                
Sbjct: 19  KKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYL 78

Query: 96  ------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+       L+    L+ A D  +    RRA+   
Sbjct: 79  NLQGLHYHWTWAYNHIGYSKYHEGVAILSLKP--LKPEDILVSAVDDETDYHTRRALVAE 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             +N K + V+ +HL  F                    A+  K   T   E   P ++ G
Sbjct: 137 TTLNDKVVTVVSLHLSWFEKG----------------FAEEWKRLETTLLEVETPLLLMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        +   DS                 +  +  +  + +D+    +
Sbjct: 181 DFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSE 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +      Q  F                +SDH  + I  DF
Sbjct: 241 DLSISSSQVVFEGGEAPV---------VSDHYGLEITMDF 271


>gi|260425583|ref|ZP_05779563.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45]
 gi|260423523|gb|EEX16773.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45]
          Length = 225

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 76/281 (27%), Gaps = 61/281 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NI            K        D   + +    + AD+V LQE          
Sbjct: 3   LKVASYNIR-----------KAMGLDRRRDPARILKVLNRIGADVVMLQEADLRLGPRPT 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                     +   + + S  D +   H  A+ VRK   R   +   L G          
Sbjct: 52  AIPRFLIEQETDYEVADVSVNDVSIGWHGNAMLVRKGLQRGGVRRLELPGL-------EP 104

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV + VE  G       + L                      Q   +++ ++  + + 
Sbjct: 105 RGAVLVEVE--GISFVGAHLGLM---------------RRFRLLQMTAIREHLSGIETTA 147

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
               IAGDFN   +  G                    +      +    R    +D F  
Sbjct: 148 ---FIAGDFNEWSDVRGYEPWENDF------------KLVLPGRSYHAARPVAALDGFAY 192

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          I       +   +  SDH PI  + D
Sbjct: 193 GNALR----------IERMGVMREGPARVASDHLPIWAELD 223


>gi|148977616|ref|ZP_01814192.1| Sphingomyelinase C precursor [Vibrionales bacterium SWAT-3]
 gi|145963131|gb|EDK28399.1| Sphingomyelinase C precursor [Vibrionales bacterium SWAT-3]
          Length = 461

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/273 (10%), Positives = 78/273 (28%), Gaps = 28/273 (10%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY-------STERLINHSKR 104
               LL   +   D D+V   E+    A   +         Y       +     +    
Sbjct: 17  KRAELLANSSVFDDIDVVVFNEVFDNRASQILIDALAQKFGYLTPVLGRTKNGWDHTEGW 76

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
            S +     + V  K     +          +   +  +  +  ++   G++  ++  H+
Sbjct: 77  RSTSLDDGGVIVFSKYPIEYKSQVIFRDGCGADWAS-QKGFIHTVINKGGERYNIIGTHV 135

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNNDD 223
           ++       +        +   Q   ++ +I    + +   F IAGD N   +    +  
Sbjct: 136 QA-----DDDTCNIAPSVVRQDQFAQIESYIFGANRSADEMFFIAGDLNVAKDSQEFSSM 190

Query: 224 FWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                    +                 +AN        +DY +++++  +     +   +
Sbjct: 191 LATLNASAPTNYAGAPYSWDPAVNGLAHANYPDLKGQLLDYVLVERSHKQPKNWHN-QVL 249

Query: 279 LYNEDDI-------KSRGKRLSDHCPISIDYDF 304
               D +              SDH P++  +++
Sbjct: 250 DIVSDRVELPGTQEPYYFYEYSDHFPVTA-FEY 281


>gi|311977773|ref|YP_003986893.1| hypothetical protein MIMI_gp0419 [Acanthamoeba polyphaga mimivirus]
 gi|82000306|sp|Q5UQW5|YL388_MIMIV RecName: Full=Uncharacterized protein L388
 gi|55417007|gb|AAV50657.1| unknown [Acanthamoeba polyphaga mimivirus]
 gi|308204374|gb|ADO18175.1| putative endonuclease/exonuclease/phosphatase [Acanthamoeba
           polyphaga mimivirus]
          Length = 268

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 84/286 (29%), Gaps = 33/286 (11%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK----VFPK 86
           +  L+   G     +SV +  +   L+    +  + DI+  QE             +   
Sbjct: 3   VLNLNVFRGFHTQFHSVYKWENRRDLIINLIEAENPDIILFQECNKLQNTEDMEKFMEDL 62

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG--AKDSFSRAGNRR 144
             +              R      +    ++   +       P +      +      R 
Sbjct: 63  PNYDYVIKYSLPGVFRSRALIIAYNPNKLIKNSEIVKWFSDTPDVPSIGWGNPDDDFGRI 122

Query: 145 AVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            +      + + KK W+ ++H                    + +    L + I ++  S 
Sbjct: 123 ILGCEFLEKNSDKKFWIFNVHF-------------DIDVESIRKSILLLPELIDKQCLSD 169

Query: 203 VPFVIAGDFN--RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPI 257
              ++AGDFN   K+ +    ++ +  +    +     K   S      N       + +
Sbjct: 170 SKIILAGDFNTDDKLLFDTLKNNNFDRLSQTFNTTDKVKLNVSFVGKRDNFGKLTEDLYL 229

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+    +         +++     E D       +SDH P+ I ++
Sbjct: 230 DHVFGRE-------VYNYNIYCPFEYDFIINKYIVSDHLPVVIIFE 268


>gi|326432132|gb|EGD77702.1| hypothetical protein PTSG_08794 [Salpingoeca sp. ATCC 50818]
          Length = 417

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 82/318 (25%), Gaps = 40/318 (12%)

Query: 18  ASVAQKVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQE 73
            + + ++R+ ++N+                +           + +  +   D D++ LQE
Sbjct: 91  PATSCELRIATFNVLAPCYKRLPSTQLRESDFPSLYRPRNAAILRMLREQRDLDVIALQE 150

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
              ++ V  ++       ++               D    + VR     V  +      +
Sbjct: 151 FWFHHDVQSMYMAALGSGYHVHCLQRPK-----GRDDGVVVFVRNHIQVVGTRRLHFDDS 205

Query: 134 KDSFS---RAGNRR------------AVELLVEINGKKIWVLDIHLKSFCFLDSLEN--- 175
               +       R                     N     +  +  +     D   +   
Sbjct: 206 GMRVALLLHLRVRGSTPTPIAPYLIRGTHAEALDNTNDADIAAVPHQPCPAGDGSVDLIL 265

Query: 176 --------TYSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFW 225
                             QQA+ L   +            V+ GDFN  +N         
Sbjct: 266 ANTHFSFPHTQQEHEARLQQARVLATSVQDFAREQGVGTSVLTGDFNGNVNSRSCAHLIS 325

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                 +SL     +++       +    + +D+  M  +   F    +++      D  
Sbjct: 326 ---CGYESLFHAVHDRELSVTHRTHKGEDVGVDFVFMRSDDGAFTSDAAYALPQLYPDQA 382

Query: 286 KSRGKRLSDHCPISIDYD 303
                 LSDH P+ +   
Sbjct: 383 WPEDFDLSDHRPVVVSLT 400


>gi|224159467|ref|XP_002199909.1| PREDICTED: similar to APEX nuclease, partial [Taeniopygia guttata]
          Length = 235

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 70/269 (26%), Gaps = 66/269 (24%)

Query: 60  YAKNLDADIVFLQEMGSYNAVA----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
           + +    D++ LQE     A      +  P      + S +    +S             
Sbjct: 1   WVQEEAPDVLCLQETKCAAAAVPAEVRALPGLPHQFWCSAKDRPGYSGVG---------- 50

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
                  +L +S PL           ++ A  +  EI    ++V+  ++ +         
Sbjct: 51  -------LLARSEPLDVTYGIGEGRMDQTAGVMTTEIP--SLFVVCAYVPNAGRGMVALE 101

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLGN 220
                 +   Q  + L        ++  P ++ GD N                   +   
Sbjct: 102 PRLRLDAAFLQFLRRL--------DARKPVLLCGDLNVAHADIDLCHPRANRASPGFTPQ 153

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLI 271
             D +  +     +  F     +   A                  +DY V+ Q     L 
Sbjct: 154 ERDGFSRLLAAGFVDSFRHLYPAARGAFTFWTYLGGARARNVGWRLDYAVVSQRLLGALC 213

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISI 300
                  +             SDHCPI+ 
Sbjct: 214 DSKIRNTVP-----------GSDHCPITA 231


>gi|224371443|ref|YP_002605607.1| hypothetical protein HRM2_43870 [Desulfobacterium autotrophicum
           HRM2]
 gi|223694160|gb|ACN17443.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 369

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/356 (12%), Positives = 91/356 (25%), Gaps = 78/356 (21%)

Query: 23  KVRLVSWNINTL--------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +   ++N+  L        S +      +   K             + LDA+++  QE+
Sbjct: 8   DLSFATFNLLNLQIPGGLTYSNRPPYPDDEEGKKNYYKKVMWTAMQIRRLDAEVIAFQEL 67

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPLL 131
            +  A+  VF K      Y         +         A+AVRK   +   +L     + 
Sbjct: 68  WAKQALIDVFEKAQLQNDYDIVARDAPGRG----KPQVALAVRKDRNKNSQLLDGWEWIE 123

Query: 132 GAKDSFS------------------RAGNRRAVELLVEINGK-----KIWVLDIHLKSFC 168
              D+F                      +R  +  +++  G+     +I +   HLKS  
Sbjct: 124 TFPDNFKFDKLRESYGAEEEITVTIDKFSRPILHAVIQPEGRSPKPPEISIYVAHLKSKG 183

Query: 169 FLDSLENTYSPSCS--------------LLSQQAQWLKDWITQKKESLV-----PFVIAG 209
                     P                     +A  ++  +    +        P V+ G
Sbjct: 184 PARLSFAEPQPDALIHYAKITKSAVSHIRRIMEAGAMRAMLDAVMKCEDEDAISPVVLLG 243

Query: 210 DFNRK------------INYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANKNLRN 253
           D N                Y                         +        +     
Sbjct: 244 DLNDDTLSVTNELLSDQPTYRVVEKSSAGRSSDKGLYSAERLQQYRSSRHVYYTHIYKHK 303

Query: 254 KIPIDYFVMDQNAYKFLIQ-----ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +  +D+ ++ +  Y    +             + +      +  SDH  +   +D+
Sbjct: 304 RESLDHILVSEEFYDHSRKRLWSFRELEVYNDHLNREAFEEEGASDHGQVRAYFDW 359


>gi|86740505|ref|YP_480905.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
 gi|86567367|gb|ABD11176.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
          Length = 276

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 76/292 (26%), Gaps = 54/292 (18%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            P   +   ++RLV++N    +             R       L Q     DAD+V L E
Sbjct: 13  TPVAPTSTTELRLVTFNAQHAAPD-----------RARRQAAWLGQ---QPDADLVVLTE 58

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +G       +        +             S                +  +  PL   
Sbjct: 59  VGHGPGRHALLDALAQHGYTHLHAPRPDQPDYS--------------TVIASRHTPLEPV 104

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                   +R    + + + G+++ ++ +++ S             + +  + Q    + 
Sbjct: 105 PAGIDVLAHRAP-AVDLWVGGQRLRLVGLYVPSRGP------AARRNENKRAFQHAVTRA 157

Query: 194 WITQKKESLVPFVIAGDFN-----RKINYLGNNDD---FWKTIDPNDSLIRFPKEKDSRC 245
                     P V+ GD N        +Y         F+++         +        
Sbjct: 158 LPGVLAGFDGPVVVTGDLNVVEPGHVPHYPVFGRWEHDFYRSFTDAGLTDAYRTLHPDAP 217

Query: 246 NANKN--LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             +      N    D+  +  +            +   +     R   LSDH
Sbjct: 218 GHSWYGRGGNGYRFDHTFLTTDRLD---------LTRCDYVHAPRHHGLSDH 260


>gi|297180781|gb|ADI16988.1| hypothetical protein [uncultured Sphingobacteriales bacterium
           HF0010_19H17]
          Length = 357

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 85/320 (26%), Gaps = 54/320 (16%)

Query: 16  CTASVAQKVRLVSWNI-------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-D 67
             A        +SWNI        +    +G             +   +  + +     D
Sbjct: 50  VQAISDTTFEFISWNIGYVGLGEESDFFYDGGEDVFTCKDLIQKNMDGVIDFIQKHSYVD 109

Query: 68  IVFLQEMGS-------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKK 119
              LQE+ S        N   ++     +    +           +        +     
Sbjct: 110 FFLLQEVDSMSWRSNKLNFFQRIENSWQYNYTLNYASSFVPIPIFNPLGPVYGGLCSMTH 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
              +    Y L        R     R  +   + +  K++ V++IH  +          Y
Sbjct: 170 FPVIDAYRYDLRTESAWPKRLFFLKRCFLTQRIPLLEKELIVINIHNSA----------Y 219

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDS 233
             S    +++ Q + ++  ++       VI GD+N+                 +   +D 
Sbjct: 220 DKSGIKKNKEMQHILNFAEREFYKGNYVVIGGDWNQSPPNYSNNTIPELYKDSSFTNDDV 279

Query: 234 LIRFPKEKDSRCNANKNL--------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
              +    D     N+ L             ID++++  N     I              
Sbjct: 280 PQDWKWVADVNTPTNRKLNMPYIKGLSYTSVIDHYLISPNVSVDSIAVV----------- 328

Query: 286 KSRGKRLSDHCPIS--IDYD 303
                + SDH P+   +  D
Sbjct: 329 -DMQFKYSDHQPVYLKVTLD 347


>gi|284033836|ref|YP_003383767.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813129|gb|ADB34968.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 271

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 83/292 (28%), Gaps = 41/292 (14%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
                L P  A  A  VR+ S+N+      EG       V R     T      +     
Sbjct: 14  LFAALLTPEVAVAAPDVRVASYNVKGWHLTEGAGQIDGRV-RMRESLTR----IEAKQLG 68

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           IV LQE+ S  A  +V   +     +  +     +  +     +T  A+  K+    + +
Sbjct: 69  IVGLQELESPQA--EVIRNDGGWELFRADPNTQLAGSN-----YTGNAIMWKDQAWNKVA 121

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
              L A     R  +   V L   +NG+++ V+ +H  +                     
Sbjct: 122 AWQLHATVGNRRTLHLPIVLLQHTLNGERVVVMSVHNPAGPENAEWREAMRRIEREK--- 178

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                  I   K+     ++ GD N        N+        N  +        +   +
Sbjct: 179 -------IRDLKQHYQHVLLVGDMN-------ENEAAACFFTTNGLMKAATGYHPNPNGS 224

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                     D+          +    +        D     +R SDH P+ 
Sbjct: 225 CPTAGYPGV-DWIF----GAGDIGFAGWEV------DRTFEERRWSDH-PLV 264


>gi|291558619|emb|CBL37419.1| Endonuclease/Exonuclease/phosphatase family [butyrate-producing
           bacterium SSC/2]
          Length = 371

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 94/319 (29%), Gaps = 46/319 (14%)

Query: 17  TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           T +  ++   +++NI               G S W  S K             K+ D D 
Sbjct: 53  TLTTGKQYSAITYNIGFGAYTPDFSFFMDGGKSSWAKSKKSVLKTVKNAGNLTKSYDPDF 112

Query: 69  VFLQEMGSYNAVAKVFPKN--------TWCIFYSTERLIN---HSKRDSNNDIHTAIAVR 117
             ++E+   +  +    +          +   ++         +     +      +A+ 
Sbjct: 113 ALIEEIDLNSTRSYHVNEYSILKKCLKNYDTVFAQNYDSAFLFYPFTQPHGSSKAGLALF 172

Query: 118 KKNVRVLQ--QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
            +        +S P+  + + F       ++  +   NGK + +  +H+ ++   D    
Sbjct: 173 SRYPIKDSLRRSLPISTSYNKFFDLDRCYSISRIPVDNGKYLVIFQLHMSAYGNSD---- 228

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI------NYLGNNDDFWKTID 229
                  +   Q + L   + ++ E+    +  GDFN  +      +        +    
Sbjct: 229 ------KIRKGQIRMLSADMKKEYEAGNYVLCGGDFNHDLKAAEDDDSTDRESWAYPFPR 282

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPID--YF---VMDQNAYKFLIQESFSEILYNEDD 284
                             N    ++   D  Y            F+I ++    +Y   +
Sbjct: 283 NMLPEHFSFCMDQLPKKENLWNSSRNA-DMKYIPGKTYTVTLDGFIISDNVKCDMYKNIN 341

Query: 285 IKSRGKRLSDHCPISIDYD 303
               G   SDH P+ + ++
Sbjct: 342 T---GYSYSDHDPVYVKFE 357


>gi|167521904|ref|XP_001745290.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776248|gb|EDQ89868.1| predicted protein [Monosiga brevicollis MX1]
          Length = 263

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 80/303 (26%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +VSWN+N L                 +    L    +  + D++FLQE        K+
Sbjct: 1   LHVVSWNVNGLRAV------------LKNHPKALPDLVQAENPDLLFLQE-------TKL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +                       ++  A           S    G K +      R
Sbjct: 42  QASHVADYANLLPGYTGLWSCSRAKKGYSGTAGATPTSDFRALSVQY-GIKSAHHDQEGR 100

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +    ++V+ +++ +     S ++       L      +L  +I + + S  
Sbjct: 101 -----TITVELPDLFVIGVYVPN-----SGQDLKRLDYRLNEWNVDFLA-YIRELEASK- 148

Query: 204 PFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     L   +                 +           F K       A 
Sbjct: 149 PVLVVGDLNVAHLDLDIYNAGHLVKSAGCTPQERTAFTEFLDQGFTDTFRKLYPEHTGAF 208

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                +         + +DY V                +  N           SDHCPI+
Sbjct: 209 TYWSARTGGRQDSKGLRLDYAVCSNAL-----------LEANSPLRCLDSVMGSDHCPIA 257

Query: 300 IDY 302
           I  
Sbjct: 258 IVL 260


>gi|154506602|ref|ZP_02043059.1| hypothetical protein RUMGNA_03869 [Ruminococcus gnavus ATCC 29149]
 gi|153793355|gb|EDN75777.1| hypothetical protein RUMGNA_03869 [Ruminococcus gnavus ATCC 29149]
          Length = 363

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 90/306 (29%), Gaps = 59/306 (19%)

Query: 34  LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW---C 90
                G      S      + +   +    L+ D +  QE+      +    +       
Sbjct: 77  FFMDGGKESRARSKDAVIENVSSYAEAVAQLNPDFMLFQEVDIDGTRSYHVDERKLLLSQ 136

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRK---------------KNVRVLQQSYPLLGAKD 135
              +     N++   + +  +    + +               K    +++S P+     
Sbjct: 137 TLSTDNTSRNYTFAQNYDSPYLFYPILEPHGKNKSGMLTVSNMKITESIRRSLPIEDGFM 196

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                    +V  +   NGK++ + ++HL ++    S  +           Q + L + +
Sbjct: 197 KLLDLDRCYSVNRIPTENGKELVLYNLHLSAYTSDPSTADN----------QLRMLFEDM 246

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS---------------LIRFPKE 240
            ++ ++    V  GDFN+ +          K ++ N +                    K 
Sbjct: 247 KEEYDAGNYIVAGGDFNKDLLGNSAEIFGHKELEDNWAKPISEELIPDFMQLIAPFDEKN 306

Query: 241 KDSRCN----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
               C             + +D F++  N            +   +  +   G + SDH 
Sbjct: 307 PVPSCRNADQPYSESDFVVTVDGFLVSDN------------VTVEDALVLDTGFKWSDHN 354

Query: 297 PISIDY 302
           P+ +D+
Sbjct: 355 PVYMDF 360


>gi|254506509|ref|ZP_05118651.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16]
 gi|219550683|gb|EED27666.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16]
          Length = 980

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/349 (11%), Positives = 89/349 (25%), Gaps = 70/349 (20%)

Query: 21  AQKVRLVSWNI-----------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +  ++L ++N              L+    +        +     + L      LDAD+V
Sbjct: 472 SGDIKLATFNTGGYLNSPFGGEANLANDGMLIETTVDTAQFEVQTSKLVSALIALDADVV 531

Query: 70  FLQEMGSY-----NAVAKVFPKNTWCIFYSTERLINHS------KRDSNNDIHTAIAVRK 118
            L E+ +      +A+ ++  +    +  +    I  +         ++ +     A + 
Sbjct: 532 GLMEVENNGLSTSSAIGQLVSELNKNLDEANHYHIASAQGLEQFGELTSANYLIFKASKV 591

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL---KSFCFLDSLEN 175
               +     P   + +  +            +   + + V        +  C  +S   
Sbjct: 592 GLESLKVVEMPKQVSSEKLAAQAASLIATFNFKDRDETLTVAVSDFVDRQQSCLENSSNA 651

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226
                  L    A +L   +          VI G FN  +N    +    +         
Sbjct: 652 KQGQCAELRVSAADYLGQQLQDVSGEK---VILGSFNAYLNEDPISVLTNRDDVPETHEI 708

Query: 227 -----TIDPNDSLIRFPKEKDSRCNAN--------------KNLRNKIPIDYFVMDQNAY 267
                T+  +D L     +                       N   +   DY +      
Sbjct: 709 KAASFTLIDDDPLHGENGKVIDTFYGYENVLAILDSKGYNTVNRDGQGSFDYILTSPGLK 768

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLS------D------HCPISIDYDF 304
             ++      I   E  + +     S      D      H P+ I   F
Sbjct: 769 SLVVDAKQWNINAGEASVLAYDH--SLGQQYQDVYRAAVHDPVVISIAF 815


>gi|78067868|ref|YP_370637.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
 gi|77968613|gb|ABB09993.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
          Length = 271

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 82/310 (26%), Gaps = 68/310 (21%)

Query: 12  FLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +P     A   ++  VSWN++      G + W             +R + ++  AD+ 
Sbjct: 6   LSLPFAEPHAAPDELTAVSWNLHKGRSPLGFTAWN-----------AMRNWMQSTHADVY 54

Query: 70  FLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           FLQE  +                 +AV  V+      I ++ +  I              
Sbjct: 55  FLQEAMARRMPRPVLAPGFGAPMDDAVDDVWHCQATEIAHALDWQIALGPNVFKPSWRHG 114

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+   +   L   + +        R   R  +     + G + + +L  HL        
Sbjct: 115 NAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGARPVTLLCAHLALT----- 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                    +   +Q  W+  WI +      P ++AGDFN   N           +    
Sbjct: 165 --------RAARLRQMHWIAHWIVRNAGDG-PLMLAGDFNDWRNDSV-------ALFGEI 208

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                    + +D   +                             L
Sbjct: 209 GLSEVATLLGESGRTFPAFSPALALDKMFVRG------------LTPLEWRAPSGEAAWL 256

Query: 293 SDHCPISIDY 302
           SDH P     
Sbjct: 257 SDHLPYIARL 266


>gi|222150529|ref|YP_002559682.1| hypothetical protein MCCL_0279 [Macrococcus caseolyticus JCSC5402]
 gi|222119651|dbj|BAH16986.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 273

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 78/293 (26%), Gaps = 34/293 (11%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
           +++++ N +  L +                   ++       D DI+ LQE+   S N V
Sbjct: 1   MKVLTLNTHSWLEDN------------QEEKLNVIVARILKADYDIIALQEVNQLSENDV 48

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDSFSR 139
                     +  +  +  N +           +          +       G+      
Sbjct: 49  IDAPNNLCPLLDQTPIKEGNFAYEIVEKLRALGVTYYWSFAMSHIGYDIYDEGSALLSKT 108

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ----WLKDWI 195
             +  AV + +E +        I        ++     S   S     A+       + I
Sbjct: 109 PIDPYAVFVSIEESPDDYKSRKILFGKTNVGENEMLAVSCHYSWWMTFAEGFSYEWNNTI 168

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKN 250
                  +P ++ GDFN      G         +  D+     K   S          ++
Sbjct: 169 NALSHYELPKLLMGDFNNPEGTEGYAYVLKSDANIQDTYTVAKKRTGSHTIEKNIAGWED 228

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              K+ ID+               F  + +           +SDH  +  + +
Sbjct: 229 NDGKLRIDFIFSTPE---------FKVLHHGTVFDGRTEAIVSDHFGVEAEIE 272


>gi|326432699|gb|EGD78269.1| hypothetical protein PTSG_09334 [Salpingoeca sp. ATCC 50818]
          Length = 514

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 83/312 (26%), Gaps = 48/312 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    +R+VSWNIN L          +   R    Y  +    ++++ D+V LQE+    
Sbjct: 220 AGPGVLRVVSWNINGL---------TDRPSRLPRTYIHMCDELRSVEPDVVLLQEVEPTY 270

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +       + +            +N  +    A     V +         A   F+
Sbjct: 271 YDHLLL--VMQSLGFIACHDQPRMAAAANPMLAFMFAAAGGGVGMYDMDTNPTRAPPYFT 328

Query: 139 RAGNRRAVELLVEINGKKIW---------VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            +  RR    L+                  LD+          + N +  SC   SQQ  
Sbjct: 329 MSFIRRGRLSLMSHRRTPFHNTNMMRDLNTLDVRCDRTMRRLWIGNVHLESCKEYSQQRC 388

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-----DSLIRFPKEKDSR 244
                  Q  +     ++ GD N +             +  +     D          + 
Sbjct: 389 QQFTECLQALDRHAVGIVIGDTNLR--DPEARRTLDAYLTSHPQSGIDDAWLMAGSPPAA 446

Query: 245 CNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                              R     D   +       L    F  +       +     +
Sbjct: 447 RWTWDTRVNDTLDTSRWQSRPHARYDRCFVKG-----LKTLEFQLLG----TQRKPNGFI 497

Query: 293 SDHCPISIDYDF 304
           SDH  + ID+++
Sbjct: 498 SDHFGVCIDFEW 509


>gi|298229615|ref|ZP_06963296.1| metal-dependent hydrolase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255811|ref|ZP_06979397.1| metal-dependent hydrolase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502544|ref|YP_003724484.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae TCH8431/19A]
 gi|298238139|gb|ADI69270.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae TCH8431/19A]
          Length = 271

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 76/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+       +V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEITSPEVEVNDLYQALPAAELIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAMLNW 270


>gi|89052616|ref|YP_508067.1| endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1]
 gi|88862165|gb|ABD53042.1| Endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1]
          Length = 279

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/289 (10%), Positives = 78/289 (26%), Gaps = 46/289 (15%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINH------ 101
             +        +  + DI+ LQ+M    +  A+A +     +  + +             
Sbjct: 2   EDEVAATVAVIEAANPDILALQDMDYDGNQVALAALAEALGYAHYTTLRPNTGRLTGVDL 61

Query: 102 -----------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS------------ 138
                      +      +    +A+  +      Q +  +  +D               
Sbjct: 62  DGDGRTDGPRDAHGYGRFNGEGGMALLSRFPLGDVQDFSDMLWRDLPGTAAAGVTPEAAL 121

Query: 139 ---RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              R     A ++ V      + +L  H  +  F    +     +   +   + +L D  
Sbjct: 122 PVLRLHTVGAWDVEVVTPDGSLHILMSHATTPVFDGPEDRNGLRNADEVRFWSLYLDD-- 179

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                    F   G  N          D    +  + +L        +    +      +
Sbjct: 180 ----TPPAHFAYMGTLNVDPQRGEGLRDPLVELLSHPTLQDPVPGGPTADWDDPTPG-DL 234

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +DY +  ++            +   E ++    ++ SDH  + +D +F
Sbjct: 235 RVDYLLPSRSLTVR----DAGVLWPTEGELAEAVEQASDHRLVWVDVNF 279


>gi|58337957|ref|YP_194542.1| exodeoxyribonuclease [Lactobacillus acidophilus NCFM]
 gi|227902875|ref|ZP_04020680.1| exodeoxyribonuclease [Lactobacillus acidophilus ATCC 4796]
 gi|58255274|gb|AAV43511.1| exodeoxyribonuclease [Lactobacillus acidophilus NCFM]
 gi|227869391|gb|EEJ76812.1| exodeoxyribonuclease [Lactobacillus acidophilus ATCC 4796]
          Length = 253

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 71/303 (23%), Gaps = 77/303 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VSWN+N                              +LD DI  +Q+        K+
Sbjct: 1   MKFVSWNVNGFRRCLRHGF---------------LDTFLDLDPDIFGMQDTRLSPKEVKI 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +             S    +   AV  K   +   +   +            
Sbjct: 46  DLTEYYQYW-----------NFSEEKRYDGAAVFTKIKPLAVYNGIGIP----------- 83

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  +  G+ I +                            AQ  ++++  K  +  
Sbjct: 84  -----EFDREGRTITLEFPKFYYVNTFAPYAGEQLQRLDFRVMWAQAFRNYV-TKLANNK 137

Query: 204 PFVIAGDF----------------NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P +I GD                 N          +F + ++                  
Sbjct: 138 PVIIGGDMSVAHDEIDLAEPEKNKNHAGFTGDERKEFTELLNAGFEDTFRTLHPKDEAYT 197

Query: 248 NKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +  +          +DYF++       +        +             SDHCPI +
Sbjct: 198 YWSRHDNARDKNIGERLDYFLVSHALTDKVEGSDILNNIDE-----------SDHCPIEL 246

Query: 301 DYD 303
           + D
Sbjct: 247 NMD 249


>gi|15902713|ref|NP_358263.1| hypothetical protein spr0669 [Streptococcus pneumoniae R6]
 gi|116516071|ref|YP_816156.1| hypothetical protein SPD_0662 [Streptococcus pneumoniae D39]
 gi|303255826|ref|ZP_07341867.1| hypothetical protein CGSSpBS455_10054 [Streptococcus pneumoniae
           BS455]
 gi|303266291|ref|ZP_07352182.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS457]
 gi|15458256|gb|AAK99473.1| Hypothetical protein spr0669 [Streptococcus pneumoniae R6]
 gi|116076647|gb|ABJ54367.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae D39]
 gi|301801606|emb|CBW34304.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae INV200]
 gi|302597210|gb|EFL64315.1| hypothetical protein CGSSpBS455_10054 [Streptococcus pneumoniae
           BS455]
 gi|302644221|gb|EFL74477.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS457]
          Length = 271

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 79/281 (28%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D D++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +                     +    +    K+   P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKG----------------FQEEWARFEVVLKKLNKPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAMLNW 270


>gi|326423820|ref|NP_760237.2| putative extracellular nuclease [Vibrio vulnificus CMCP6]
 gi|319999188|gb|AAO09764.2| Predicted extracellular nuclease [Vibrio vulnificus CMCP6]
          Length = 1046

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/386 (11%), Positives = 88/386 (22%), Gaps = 112/386 (29%)

Query: 23  KVRLVSWNINTLSEQEGVSLWK--------NSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +++ + N+                      S +        + +    LDADIV L E+
Sbjct: 508 TIKVATQNVLNYFNSPYGGHDNQFGDNRGAESQQEFERQQAKIVEAIYGLDADIVGLMEV 567

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----------------------- 111
            +         +       +     N+  R +   IH                       
Sbjct: 568 ENNGFGDFSAIRELLEAINAKYYKENYKDRFARESIHNRYVFVGFDKNGDQVLDQFDTIG 627

Query: 112 -----TAIAVRKKNVRVLQQSYPLLGAKD--------------------SFSRAGNRRAV 146
                T I  R   V V+      +  +D                       +   R  V
Sbjct: 628 SDAITTGIIYRPSKVSVIAGKVIPMPWQDAPMIVDADGKPVVDGKGELAESGKNYQRNTV 687

Query: 147 ELLVEI--NGKKIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQ---AQWLKDWITQK 198
                +   GK++ V   HLKS    C+ D +        +  S +            + 
Sbjct: 688 AATFRVLNTGKQLTVSVNHLKSKGSTCWDDYVGTKAVDDDAQGSCENFRVASTYHLGQEM 747

Query: 199 KESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS--------------------- 233
            +     ++ GD N   +        ++   K +   D                      
Sbjct: 748 AKIGGDQIVLGDMNSYAHEDPMLVLTSNPTKKALKAADYIKVGNKWQFNGEQGPVITQTF 807

Query: 234 ----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR- 288
                + +         +         +D+ ++  +    L+      I   E  +    
Sbjct: 808 GFINAVDYKTPAGETSWSYSYNDEVGSLDHLLITSSLKSRLVDAVDWHINAPESTLFDYS 867

Query: 289 ------------------GKRLSDHC 296
                               R SDH 
Sbjct: 868 NKYKGGDLNEANPFYKADAFRSSDHD 893


>gi|254564277|ref|YP_003071371.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           DM4]
 gi|254265791|emb|CAX17154.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           DM4]
          Length = 352

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 66/254 (25%), Gaps = 47/254 (18%)

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
           ++  DY        +   D+V L E              +W    +  R     + +   
Sbjct: 115 QSNRDYGAALNLVASRSPDLVLLLETD-----------ESWREAMAPMRDRYPERVEQPQ 163

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
           D    +    +          LL       R         +V  +G+ +    +H +   
Sbjct: 164 DNTYGLLFYSRFPLRDATVRHLLQEDVPSLRT-------AIVLPDGEHVTFHGLHPRPPH 216

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
              S                  L     +  E+  P ++AGD N         +  ++ I
Sbjct: 217 PGHSSAPRD-----------AELVMVAREVAETRGPTIVAGDLNDVAWSRT--NALFQNI 263

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                L              +    + P+D+    ++                   ++  
Sbjct: 264 S--GLLDPRQGRGLFSTFHARYPFARWPLDHVFYSEHFL--------------LSGMERL 307

Query: 289 GKRLSDHCPISIDY 302
           G   SDH PI ++ 
Sbjct: 308 GDVGSDHFPIWVEL 321


>gi|119715685|ref|YP_922650.1| endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614]
 gi|119536346|gb|ABL80963.1| Endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614]
          Length = 364

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 76/282 (26%), Gaps = 36/282 (12%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
                R+ ++N+   S        +      T          ++  AD+V LQE      
Sbjct: 106 APTTFRVSTFNVLGASHTNAGGNKRGWASAGT-RMGWAVSVLRSSGADVVGLQEFEESQF 164

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    +    +    +          +  +IA R     ++  +   +        
Sbjct: 165 RT-------FTNLTAGSWGVYPGTSGDPRAVRNSIAWRTDTWELVAGATTPIPYFRGQKI 217

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                 V L    +G+ ++ +++H  +          +  +   L          I Q  
Sbjct: 218 PMPY--VRLRNIASGQDVYFINVHNPATTGRWGNNERWRDAAIALEI------GLINQLH 269

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            +  P V+ GDFN         D+ +  +  + ++             +      + +D+
Sbjct: 270 TAGFPVVLTGDFN-------ERDEVFCKVTGSGAMRAANGGSAGG---SCVPPPDMNVDW 319

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                         S  E            +R +DH  +  D
Sbjct: 320 IFGS----------SVIEFSNFLATKGGLVQRATDHPFVVAD 351


>gi|323476236|gb|ADX81474.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus HVE10/4]
          Length = 247

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 73/303 (24%), Gaps = 79/303 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VSWN+N +                 +    L  + +N   +++  QE         +
Sbjct: 1   MKIVSWNVNGIRA---------------ALKKNLIDFIENNMFEVIMFQETKG-----DI 40

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P +   + Y                 ++ +    K   +       +   D   R    
Sbjct: 41  VPLDFIMMGYEVISFPAK------RKGYSGVMTLTKLKPINVIKGLQIKEFDDEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V +  K  +V++ +           +      + +      L+           
Sbjct: 91  -----TVTLELKDFYVINAYFPRAGDNLERLDFKLKFNNEIENFVLKLRK--------AK 137

Query: 204 PFVIAGDFNRKINYLG--------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           P ++ GDFN     +                   F   +      I   +          
Sbjct: 138 PVILCGDFNIAHQNIDGAFSDPTIPGLTPQERSWFSHFLSLG--FIDTFRYLHPNVRKYS 195

Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +DY ++ +     +                    + SDH PI +
Sbjct: 196 WWSYMGKAREKNLGLRLDYCIVSEELKDRIKMADILI-----------DIQGSDHAPIIL 244

Query: 301 DYD 303
           +  
Sbjct: 245 ELT 247


>gi|311111888|ref|YP_003983110.1| RgfB protein [Rothia dentocariosa ATCC 17931]
 gi|310943382|gb|ADP39676.1| RgfB protein [Rothia dentocariosa ATCC 17931]
          Length = 297

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 81/306 (26%), Gaps = 57/306 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R ++ N +                        L ++  +   D++ LQE+  Y     V
Sbjct: 1   MRFLTLNTH-----------SWCEPHQIVKIHELARFIAHHRVDVIALQEVNQYLHSPIV 49

Query: 84  FPKNTWCIFYS---------------------TERLINHSKRDSNNDIHTAIAVRKKNVR 122
                +    S                                        +AV  +   
Sbjct: 50  DMPLGYQGGASIPIREDNYALLLVRFLADLGVQYEWALTETHIGWERYDECVAVLSRMPI 109

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
              +   ++  +  + R   R ++ + V  +   +W    H+  + F             
Sbjct: 110 ERIEPI-VMSPQYDYDRVERRSSLAVRVGTDAGSVWCASTHMSWWDFQGEP--------- 159

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           L +Q+   L   +T+      P ++ GDFN      G   D   +    D+     +   
Sbjct: 160 LFAQEFARLSQALTEC-GQDAPVLMGGDFNTAAQVRGEGYDLALSSGLVDTREIAERTDG 218

Query: 243 SRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +    +       ID+   D+          F +              +SDH  
Sbjct: 219 EFTVHREIAGWEGQEDAKRIDFVFADRAVKVLSHAVVFRDNSPK---------AISDHSG 269

Query: 298 ISIDYD 303
           + ++ D
Sbjct: 270 VLVELD 275


>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 1168

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 95/302 (31%), Gaps = 33/302 (10%)

Query: 11  FFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +  VP ++           +R+ S+N+         S +    +R       LR   +  
Sbjct: 251 WIAVPESSPSTGKCTHVGSLRVASYNV------LIDSHYPPPTERYPILLQNLRA--EAA 302

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            ADI+ LQE+   + ++ +       +     R    +    +    + +   +  V + 
Sbjct: 303 TADILVLQEVSD-DFLSFLLRDPEIRL-----RYPFTTHGPPDQADISPLTSLRNIVVLS 356

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           Q S+        +     R    ++++++   I  L        ++ + +   + S   L
Sbjct: 357 QWSFHW-----EWLPFETRHKGAVVLKLDNLIINHLSSKYAHNHWIVAGDFNITTSSYTL 411

Query: 185 SQQAQWLKDWITQKKESLVPFV--IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK- 241
               +  +  I+ +  S +  +  +  +         +  DF    +  +     P E  
Sbjct: 412 DLAVK--RKSISPQAASTLSSLGGMLAEAGDPPGNPWDGLDFGALYEGEEGATFDPTENY 469

Query: 242 -DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +R       +     D  ++   A++ L    F       D +    +  SDH  I  
Sbjct: 470 LAARIPGQSFHKRPQRYDRILVRGEAFEVLGLNRFGVPDIASDGV--DAQLGSDHWGIRA 527

Query: 301 DY 302
             
Sbjct: 528 VL 529


>gi|22538094|ref|NP_688945.1| hypothetical protein SAG1958 [Streptococcus agalactiae 2603V/R]
 gi|76797931|ref|ZP_00780192.1| RgfB [Streptococcus agalactiae 18RS21]
 gi|22535000|gb|AAN00818.1|AE014280_10 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
 gi|76586705|gb|EAO63202.1| RgfB [Streptococcus agalactiae 18RS21]
          Length = 276

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 73/280 (26%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST---------------- 95
                L ++      DI+ LQE+    +         +     T                
Sbjct: 24  KKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYL 83

Query: 96  ------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+       L+    L+ A D  +    RRA+   
Sbjct: 84  NLQGLHYHWTWAYNHIGYSKYHEGVAILSLKP--LKPEDILVSAVDDETDYHTRRALVAE 141

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             +N K + V+ +H   F                    A+  K   T   E   P ++ G
Sbjct: 142 TTLNDKVVTVVSLHFSWFEKG----------------FAEEWKRLETTLLEVETPLLLMG 185

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        +   DS                 +  +  +  + +D+    +
Sbjct: 186 DFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSE 245

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +      Q  F                +SDH  + I  DF
Sbjct: 246 DLSISSSQVVFEGGEAPV---------VSDHYGLEITMDF 276


>gi|332288793|ref|YP_004419645.1| conserved hypothetical protein,
           endonuclease/exonuclease/phosphatase family
           [Gallibacterium anatis UMN179]
 gi|330431689|gb|AEC16748.1| conserved hypothetical protein,
           endonuclease/exonuclease/phosphatase family
           [Gallibacterium anatis UMN179]
          Length = 291

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 95/287 (33%), Gaps = 66/287 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  Q ++L+ WN++   +Q   SL  N  ++T                D + LQE  S  
Sbjct: 69  STTQPLKLLVWNVHKGEDQGWQSLLLNYEEKT----------------DFMLLQEATSLQ 112

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + ++       +F S           +  D+ + +A            Y    A D   
Sbjct: 113 KLPQLLQHMPNQLFAS---------GFAYRDMQSGVATLSPFSP----QYYCSAAVDEPW 159

Query: 139 RAGNRRAVELLVEINGKKIWV-LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            A  + +V  +  ++  K  + +++H+ +F +  S                Q L+  + Q
Sbjct: 160 LAIPKTSVSSVYPLDNGKFLLMINVHMVNFEWGTSAYR-------------QQLEQIMQQ 206

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            ++ +   +IAGDFN        N D    +    +     +   S  N  +       +
Sbjct: 207 LQQRVDAVIIAGDFNAW------NQDRVAILQQKMAQFGLHEISFSPDNRLRFNGFP--L 258

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           D+  +                        ++  + SDH P+ ++  F
Sbjct: 259 DHIFVKG---------------LKAVSATTKKTKASDHNPMWVELTF 290


>gi|119476762|ref|ZP_01617072.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2143]
 gi|119450018|gb|EAW31254.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2143]
          Length = 257

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 73/271 (26%), Gaps = 63/271 (23%)

Query: 59  QYAKNLDADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
            +     AD+V +QE  +        VF    +  +Y       +S         TA+  
Sbjct: 21  DWLALQSADVVCIQETKAQIDQLADPVFHPEGYHCYYFDAEKKGYSG--------TALYC 72

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +KK  ++                          ++ +   + V  I++ S    D     
Sbjct: 73  KKKPKKITSGLGWDPADSQGRY-----------IQADFDGVSVASIYVPSGSSGD----- 116

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------- 223
              + +        + D     +     F+   D+N     +   +              
Sbjct: 117 --EAQARKEVFMTNIMDHFKAMRRKRREFIFCADWNICHREVDIKNWRGNRKNSGFLPHE 174

Query: 224 --FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
             +  ++  +       +  +   +      N+           +DY V+       +  
Sbjct: 175 RAWLDSLFDDVGYADAFRVINQEEDQYTWWSNRGQAWAKNVGWRLDYQVVTPGLVDKIQS 234

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            S             + +R SDH P  +DYD
Sbjct: 235 ASI-----------YKDERFSDHAPFIMDYD 254


>gi|326538608|gb|ADZ86823.1| exodeoxyribonuclease III Xth [Brucella melitensis M5-90]
          Length = 198

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 53/175 (30%), Gaps = 36/175 (20%)

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
             +   + V+ ++L +   +D+ +  Y  S        Q L++W  ++     P V+AGD
Sbjct: 35  STDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEEPLVLAGD 88

Query: 211 FNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANKNLRNKI- 255
           +N      +           +             N       +              +  
Sbjct: 89  YNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYSFWDYQAG 148

Query: 256 --------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    ID+ ++   A    I  +  + +          ++ SDH P+++  
Sbjct: 149 AWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTVTL 196


>gi|83593356|ref|YP_427108.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
           11170]
 gi|83576270|gb|ABC22821.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
           11170]
          Length = 246

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 69/287 (24%), Gaps = 65/287 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+V WNI                         +         D++ L E  +  +  ++
Sbjct: 12  IRVVCWNILHGGG---------------RRVDAILTRIVRHRPDVLILTEFRNDASGQRL 56

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +    +  H                   V +  + Y         +     
Sbjct: 57  RAGLRDIGLWYEHFVPTHK--------------TSNGVLIAARDYVDAVQPLDTTVRKPH 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +E LV      + V+ +++               +                       
Sbjct: 103 LLLEGLV----AGLSVIGVYMPMGEAKTPYWEAVVAAARRR----------------EAS 142

Query: 204 PFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIRFPKEKDSR--CNANKNLRNKI 255
           P ++ GDFN   +++           F   ++    +  +              +  N  
Sbjct: 143 PTLVIGDFNTGKHFIDEKGTSLVSAPFMNRMEEAGFVDLWRARNPEGREFTWFSHKGNGF 202

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D+     +    +    +S           R  R+SDH  + +D 
Sbjct: 203 RLDHAFASPSLAARVTDVFYSH--------AERLDRISDHSALILDI 241


>gi|21244850|ref|NP_644432.1| hypothetical protein XAC4133 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110556|gb|AAM38968.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 455

 Score = 63.4 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 72/305 (23%), Gaps = 40/305 (13%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            L    V    S    + ++++N+  L E    S    +                     
Sbjct: 37  TLACAGVAHAQSSVGVLDVLTYNVAGLPEGISSSNPATNTPLLAPKLAPYA--------- 87

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V +QE  +Y+A       + +    S               I   +             
Sbjct: 88  LVHVQEDFNYHAALYAGDNHPYRTPTSG-----------GAAIGDGLNTLSNYPFNDFTR 136

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                   +        +   +   NG  + V + H  +           +   +     
Sbjct: 137 VKWDKCNGTDCLTPKGFSYMQVRLDNGVLLDVYNAHPNAGT--------ETADLAARRAN 188

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTIDPNDSLIRFPK 239
              L  +I     +    ++  D N +             +ND     ++          
Sbjct: 189 ISQLSQFIGTW-SAGNAVLVMMDSNTRYTRSEDNIRELIASNDLIDPWVELIKGTAPAAG 247

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                C           +D  +        L    +       +   S GK LSDH P+ 
Sbjct: 248 AAPLLCGTPPTNS-CEVVDKILYRAAPQLTLAANRYQLDP--GNFYDSAGKPLSDHYPLY 304

Query: 300 IDYDF 304
             + +
Sbjct: 305 TQFGW 309


>gi|170693952|ref|ZP_02885108.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M]
 gi|170141024|gb|EDT09196.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M]
          Length = 265

 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 74/301 (24%), Gaps = 65/301 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           ++  +    VSWN++      G   W             ++++ ++  AD  FLQE  + 
Sbjct: 11  STAPKDFVAVSWNLHKGRTPLGFQAW-----------QAMQRWVQSTHADAYFLQEAMAR 59

Query: 78  NAVAKVFPKNTWCIFYSTERLINH----------------SKRDSNNDIHTAIAVRKKNV 121
              + V   +           + H                             A+   + 
Sbjct: 60  RMPSPVLASSFGAPVADPLNDVWHCQATEIAQALQLEIALGPNVFKPSWRHGNAILSPHP 119

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             L   + +        R   R  +       G  + +L  HL                 
Sbjct: 120 LDLGGRWDISA-----HRFEKRGLLVARATFGGHSVTLLCAHLALTRS------------ 162

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
               +Q  W+  WI ++     P V+AGDFN   N           +     L       
Sbjct: 163 -ARLRQMNWIAHWIAKEAPDG-PLVLAGDFNDWRNDSVP-------LFGEHGLHEVATLL 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                        + +D   +        I  +                 LSDH P    
Sbjct: 214 GEAGRTFPAFSPALALDKMFVRGMKPIEWIPPT------------QETAWLSDHLPYMAR 261

Query: 302 Y 302
            
Sbjct: 262 L 262


>gi|163915217|ref|NP_001106580.1| hypothetical protein LOC100127792 [Xenopus (Silurana) tropicalis]
 gi|160773551|gb|AAI55401.1| LOC100127792 protein [Xenopus (Silurana) tropicalis]
          Length = 519

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/283 (10%), Positives = 78/283 (27%), Gaps = 50/283 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+   S  +  +              ++          ++ +QE+   +A+ K 
Sbjct: 254 LRVATWNLQNCSLDKASNPGV---------REVVCMTLLENSVKLLAVQELSDKDALEK- 303

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                              +         +  +  KNV + +         +   +    
Sbjct: 304 ------------------KEEYFGFMWDVSAGIELKNVILAEN-----MQTNGNGKHMYL 340

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           +      ++    + +++IHL             +   +            + +  +S  
Sbjct: 341 QPYIAHFKVGTCDVALVNIHLFPPTVETVKHQNDTYKSATFG-------QTLQETLKSER 393

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             +I G F+   +        + ++         P    +  +      NK  +D   + 
Sbjct: 394 DVIIMGCFSLPADASE-----FDSLRKEKFQNLLPPNTFTNISTKNPQGNKS-LDNIWIS 447

Query: 264 QNAYKFLIQESFSEIL-YNEDDIKSRGKR---LSDHCPISIDY 302
           ++  K     S           I          S+HCP+  ++
Sbjct: 448 KSLKKIFTGYSLVVREGLTNPWIPDNWSWGGVASEHCPVLAEF 490


>gi|86132950|ref|ZP_01051540.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
 gi|85816468|gb|EAQ37656.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
          Length = 361

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 67/252 (26%), Gaps = 44/252 (17%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
            Y LL     + D DIV L E  +                +S+                 
Sbjct: 118 QYDLLLSQVADYDPDIVLLMETDTVW----------KKAVHSSLASTYSHHLLEPRGNTY 167

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + +  K     ++   L+                ++   +G +I +  IH        +
Sbjct: 168 GMLLYSKLPLTQKKVRHLV-------DKEVPSMEAIVTLESGDQIQLYAIHPTPPMPQHN 220

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
             ++              +        +  +P ++ GDFN        +   ++ +    
Sbjct: 221 PMSSDRD---------TEMMKTAFTVNKRTLPVIVMGDFNDVAWSRTTS--LFRKVS--K 267

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L              KN+  + P+D+    Q      ++ +                  
Sbjct: 268 LLDPRIGRGFYNTFNAKNILMRWPLDHLFTSQEFRVKKLERTGHIK-------------- 313

Query: 293 SDHCPISIDYDF 304
           SDH P+  +  +
Sbjct: 314 SDHFPVYSELTY 325


>gi|118359034|ref|XP_001012758.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89294525|gb|EAR92513.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 421

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 77/219 (35%), Gaps = 26/219 (11%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A +V+++++N+         +      +R       ++   +    DI+  QE+     
Sbjct: 39  QADEVKILTYNVFMRPPLIKNNEDDFKNERCDLI---IKNEIEKF--DILCFQELF---- 89

Query: 80  VAKVFPKNTWCIFYSTERLINHSKR-------DSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             ++F    + + YST +                +  +   + +  +   V     P + 
Sbjct: 90  --RLFSYRRYKMAYSTVKQGFLHHVSSPQPKLFGDYLVDGGLTILSRYPIVQSCFKPFVY 147

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +  + S    +  +   +++N K + V + H ++    +  E  ++    +  +Q    +
Sbjct: 148 SILADSFQE-KGVLYAKIKVNDKHMHVFNTHTQATYNTNEKEIKWT--VVVRLEQIVESR 204

Query: 193 DWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFWK 226
             + +  +          + AGDFN   N+  +  DF  
Sbjct: 205 RILEECLKQYGFERGDICIFAGDFNVDSNHPVHPIDFLD 243


>gi|225557534|gb|EEH05820.1| inositol phosphosphingolipids phospholipase C [Ajellomyces
           capsulatus G186AR]
          Length = 473

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/333 (12%), Positives = 76/333 (22%), Gaps = 71/333 (21%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           N+ TL+      + +   +R       +          IV LQE  S          +  
Sbjct: 14  NVLTLNCWGLKYISEYRRERLIEIGKRIA--LSENTPHIVGLQECWSRE--------DYH 63

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144
            I   T  ++ + K   +      +A+  K        +         A         + 
Sbjct: 64  NIRRETREILPYGKFYFSGIFGGGLAILSKWPIEESTMHAYPLNGRPSAIFRGDWYVGKG 123

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + I      ++D+           E   S  C   + QA  +   +    E    
Sbjct: 124 VACARIRIGPAAADIVDVFCTHLHAPYEREPRDSYIC-HRTAQAWEIAKLMKAAAEKGHL 182

Query: 205 FVIAGDFNRKI--------NYLGNNDDFWKTIDPNDSL---------------------- 234
            V  GDFN                  D W  + P+ S+                      
Sbjct: 183 VVGLGDFNMLPQSFAHRLITSHAPVKDVWGHLHPDSSIGAAIDSAEMSRKKPVPSADFNI 242

Query: 235 --IRFPKEKDSRCNANKNLRNKI-------------------PIDYFVMDQNAYKFLIQE 273
                  +           + K                     +DY  +   ++      
Sbjct: 243 SENGATCDSILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNFSSL 302

Query: 274 SFSEILYNEDDIKSRGKR----LSDHCPISIDY 302
              +I      +  R       LSDH  +    
Sbjct: 303 RKWDIESARVCMLERHPHLHCSLSDHFGVEATI 335


>gi|225445865|ref|XP_002278804.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 310

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 74/318 (23%), Gaps = 66/318 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++++N++            +S         L      +    I+  Q       V  
Sbjct: 4   SLTVMTFNLH-------EDQPDDSPNSWEKRRDLCISVITSYSPMILCTQ-----QGVKT 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDS 136
                   +    +  I+       +D H  I   K+ V +L+         P +    S
Sbjct: 52  QLEFLQQGLPGYDQVGISRKGSQDTSDEHCTIFYDKEKVELLESGTFWLSESPSVPGSTS 111

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +       A     ++ G +       + +    +        S  L  Q    L     
Sbjct: 112 WGSVVPCIATWATFQLKGVEPPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASL----- 166

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNL 251
                 +P V  G FN             +      +          + + +        
Sbjct: 167 ---PPSLPVVYCGGFNTPKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNGSLIRTYH 223

Query: 252 RNKI---------------------------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
             K                             ID+ +        LI      +  N D 
Sbjct: 224 GFKGDKQGAVEFLKLIFRALCLCWDRQTQDLHIDWVLFRGR---SLIPVLCEVVNDNID- 279

Query: 285 IKSRGKRLSDHCPISIDY 302
               G   S H PI  ++
Sbjct: 280 ----GYYPSSHYPIFAEF 293


>gi|302545957|ref|ZP_07298299.1| putative membrane protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302463575|gb|EFL26668.1| putative membrane protein [Streptomyces himastatinicus ATCC 53653]
          Length = 341

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 86/318 (27%)

Query: 3   RKYVLALVFFLVPCT--------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48
           R+  +AL+  ++P T              +     + +V+ N+N  +     +       
Sbjct: 92  RRSAIALLALVLPVTVWLNLFGGLMFSDKSGGDGDLTVVTHNVNADNSDPVTT------- 144

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                     +      A +V L+E+ +                 +  + +  + R    
Sbjct: 145 ---------AKDVAASGAQVVALEELTT-------------KAVPTYTKALGSTYRYHAV 182

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-F 167
                +  +          YPL G K    + G  RA+   V   G ++ V   HL S  
Sbjct: 183 QGTVGVWSK----------YPLSGTKPVDIKMGWTRALRTTVTAPGGEVAVYVAHLPSVR 232

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
              ++         S     A  L + I  +       V+ GD N  +N         ++
Sbjct: 233 VKFNAGFTAGQRDAS-----ADALGEAIRDEPLDK--VVLLGDLNGTMND--------RS 277

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           + P  S +R  +                   ID  ++       +   S   +       
Sbjct: 278 LAPVTSQMRSAQGAAGDGFGFSWPASFPMARIDQIMVRG-----VNPVSAWTL------- 325

Query: 286 KSRGKRLSDHCPISIDYD 303
               +  SDH P++    
Sbjct: 326 ---QQTGSDHLPVAASVT 340


>gi|312794993|ref|YP_004027915.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia
           rhizoxinica HKI 454]
 gi|312166768|emb|CBW73771.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 301

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 79/307 (25%), Gaps = 66/307 (21%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           L     +  ++   VSWN++      G+  W             ++++ +   AD+ FLQ
Sbjct: 35  LPSVPCTGDKEFIAVSWNLHKGRSPLGLQAW-----------QSMQRWMQATPADVYFLQ 83

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-----------------HTAIA 115
           E  +    A V   N +              + +                         A
Sbjct: 84  EAMARRMPAPVLASNGFGEPLQGALTDVWQCQATEIAQALRLQLTLGPNVFKPSWRHGNA 143

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +   +   L   + +        R   R  +     +    + +L +HL           
Sbjct: 144 ILSPHPLDLGGRWDISA-----HRFEKRGLLVARATLYNTPVTLLCVHLALT-------- 190

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                     +Q  W+  WI ++  +  P V+AGDFN   N           +     L 
Sbjct: 191 -----RQSRLRQMHWIAHWIAREAATG-PLVLAGDFNDWKNDSEP-------LFAEIGLR 237

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                              + +D   +                     +   R   LSDH
Sbjct: 238 EVASTLGEAGKTFPAFSPALALDKMFVRG------------VTPVQWLEPAPRTAWLSDH 285

Query: 296 CPISIDY 302
            P     
Sbjct: 286 LPYMARL 292


>gi|194209043|ref|XP_001491851.2| PREDICTED: CCR4-NOT transcription complex, subunit 6-like [Equus
           caballus]
          Length = 563

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/353 (10%), Positives = 88/353 (24%), Gaps = 77/353 (21%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 186 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 245

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 246 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 305

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI--------------------WVLDIH 163
           +       ++        +   V +++E++ +                       +L + 
Sbjct: 306 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGECSLKYPSFKPIHAADKQLLIVA 365

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY 217
                +     +       +   + + + +  + +        + +P V+  D N   + 
Sbjct: 366 NAHMHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDS 425

Query: 218 -----------LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------N 246
                        N+ DF +       +      K+                        
Sbjct: 426 GVVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPY 485

Query: 247 ANKNLRNKIPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            N     K  IDY    +   N    L       ++ N           SDH 
Sbjct: 486 TNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 538


>gi|239931661|ref|ZP_04688614.1| hypothetical protein SghaA1_25802 [Streptomyces ghanaensis ATCC
           14672]
 gi|291440028|ref|ZP_06579418.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342923|gb|EFE69879.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 350

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 79/296 (26%), Gaps = 70/296 (23%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L   L+    +    + + + N+N  +     +                 +      A
Sbjct: 114 LNLFGGLLTDKTAPGGDLTVATHNVNAQNPDPAGT----------------ARDVAAAGA 157

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ L+E+       +     T+    +     +                       L  
Sbjct: 158 DVLALEEL-------RASEVPTYEKALAATYPHHAVVGTVG----------------LWS 194

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            YPL   +    R G +RA+   V     ++ V   HL S     +   T         +
Sbjct: 195 KYPLSDVQAVDIRLGWKRAMRATVTAPAGQVAVYVAHLPSVRVKLAAGFT----ARQRDK 250

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            A  L + I  +       V+ GD N  +N         + +    S +R  +       
Sbjct: 251 SANALGEAIAAEPLKN--IVLLGDLNGTMND--------RALHAVTSQMRSTQGAVGSGF 300

Query: 247 ANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       ID  ++          ES   +              SDH PI+ 
Sbjct: 301 GFSWPASFPMARIDQIMVKGA-----EPESSWTLPAT----------ASDHLPIAA 341


>gi|157871081|ref|XP_001684090.1| RNA-editing complex protein MP100 [Leishmania major strain
           Friedlin]
 gi|38073421|gb|AAR10832.1| MP100 [Leishmania major]
 gi|68127158|emb|CAJ04957.1| putative RNA-editing complex protein MP100 [Leishmania major strain
           Friedlin]
          Length = 993

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 79/313 (25%), Gaps = 35/313 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLW--KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +R+++WN+         +          +   Y +L +     DAD+V +QE+    A 
Sbjct: 680 TLRVLTWNVMFDRYSNQPTPLGMPGIDWCSPKRYPVLAKLIDAEDADVVGMQEVERPFAE 739

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                      +  +    +         +      R    ++   + P      S    
Sbjct: 740 YLAAQPWCRERYIMSCSPQSPILDPWGVLLLVRRGGRWPLQQLKHLNVPAWSGHVSLMPV 799

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSF-------------CFLDSLENTYSPSCSLLSQQ 187
                       +           KS              C +  L      +    + Q
Sbjct: 800 ATLDLSAAAAHSDNSGTGCGSSAGKSGIRKLAASPRVVNVCSMHLLAPFVKVNEVARTGQ 859

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE-KDSRCN 246
            Q L+  +T++ +     ++ GDFN   +         + ++    +            N
Sbjct: 860 DQALRHALTRQLQGDT--LVMGDFNDWPSNEFLMPPESRYVECWPIIHPGDYGKTMDESN 917

Query: 247 ANKNLR----NKIPIDYFV-------MDQNAYKFLIQESFSEILYNEDDIKSRGK----- 290
               L+         D                  L       +     + ++  +     
Sbjct: 918 TFCKLKIEEIFFGRSDKVFLRTGTATASSPTRGVLKPVEAHLVGTRSVNDENGNQEAPAY 977

Query: 291 -RLSDHCPISIDY 302
              SDH  +S+ +
Sbjct: 978 LFPSDHYGVSMQF 990


>gi|126342732|ref|XP_001367276.1| PREDICTED: similar to APEX nuclease (apurinic/apyrimidinic
           endonuclease) 2 [Monodelphis domestica]
          Length = 482

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 82/326 (25%), Gaps = 80/326 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           +RLVSWNIN +                      LR    +L AD+  LQE      +   
Sbjct: 1   MRLVSWNINGIRRSP----------------EALRHLLDSLGADVTCLQETRVTRDLLEE 44

Query: 82  KVFPKNTWCIFYSTERLI-NHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R    +S   +          A       +   Q +    G  + 
Sbjct: 45  PLAIVEGYSSYFSFSRCRSGYSGVATFCKNNATPGAAEEGLTSLLTTHQGAVGSYGNTEE 104

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLL 184
           F+    R                  +   K + +++++            TY      LL
Sbjct: 105 FTEDELRSLDSEGRAVLTQHQIRTSDGQEKTLTIMNVYCPHADPEKPERLTYKLRFYRLL 164

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNR------------------KINYLGNNDDFWK 226
             +A+ L         +    +I GD N                           +  W+
Sbjct: 165 QLRAEALLQ-------AGSHVIILGDVNTSHRPLDHCDPADLECFEENPGRQWLTEFLWQ 217

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNL----------RNKIPIDYFVMDQNAYKFLIQESFS 276
               +   +   +                           +DY + D+            
Sbjct: 218 PDRDSGLFVDSFRHFHPTTVGAFTCWSTATGARLTNYGTRLDYILGDRAL---------- 267

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
            +   ED         SDHCPI    
Sbjct: 268 VLEEFEDSFLMPEVEGSDHCPIGATL 293


>gi|295134450|ref|YP_003585126.1| Endonuclease/exonuclease/phosphatase [Zunongwangia profunda SM-A87]
 gi|294982465|gb|ADF52930.1| Endonuclease/exonuclease/phosphatase [Zunongwangia profunda SM-A87]
          Length = 284

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/283 (11%), Positives = 82/283 (28%), Gaps = 61/283 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + ++L++ N+                 +   D+  + +    LD D++ L E  +   V 
Sbjct: 23  KSIKLLTANV----------------LQKNKDHQSILKEVDRLDPDLLILDEA-NLKWVK 65

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            + P  +        ++  + K    ++ +  +             + LL  K  F    
Sbjct: 66  DISPYLS--------KVYPYKKEVPLDNTYGKLFY---------SKFKLLDPKVHFMVED 108

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +  +++  +   G  +    IH        +  ++   +          +     +  ++
Sbjct: 109 SIPSIDTKLLFGGDTLQFYSIHPTPPMPQHNPSSSDRDA---------EMMKIALRTYDA 159

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++ GDFN            ++ +     L            +  N   + P+D+  
Sbjct: 160 HYPVIVMGDFNDVAWSQTTR--IFRKV--GGLLDLRIGRGFFNTFSANNFIMRWPLDHVF 215

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +      I+                    SDH P   +  +
Sbjct: 216 TTEEFRVKRIEVGHDI--------------GSDHFPAFAEITY 244


>gi|71901538|ref|ZP_00683622.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|71728693|gb|EAO30840.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
          Length = 266

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 88/313 (28%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+N N L        +                +    D D++ +QE  +     ++
Sbjct: 1   MRISSFNANGLRSALSKGFF---------------DWFSTQDIDVLCVQE--TKAQRHQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + + + Y         +  +    ++ +A+  +      ++       D   R    
Sbjct: 44  VGPDFFPVGYHVCF-----RDATIKKGYSGVAIYSRCEPDELRTTLGWTEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE     + V+  ++ S    +  +N             +WL+  + +   S  
Sbjct: 96  ------VEARFGNLSVVSFYIPSGSSGEKRQNYKFEV-------MRWLRPILCEWLLSGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID-------------------------PNDSLIRFP 238
            +V+ GD+N   + L   +      +                              +   
Sbjct: 143 DYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDWLNGLCADSLHDVNSAQGRGWVDTY 202

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +    +        N+           IDY  +     + + + +               
Sbjct: 203 RVLHPQGEDYTWWSNRGAARINNVGWRIDYQFVSPGLRERVSRCAI-----------YCE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P +++Y
Sbjct: 252 QRFSDHAPYTVEY 264


>gi|260558547|ref|ZP_05830743.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium C68]
 gi|261206796|ref|ZP_05921487.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium TC 6]
 gi|260075721|gb|EEW64027.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium C68]
 gi|260078926|gb|EEW66626.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium TC 6]
          Length = 274

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 74/282 (26%), Gaps = 53/282 (18%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI------------------- 91
                 L       D +++ LQE+       +V P                         
Sbjct: 14  EKKLQELADKILLEDYEVIALQEINQLLESEEVEPAKLMKFCPVKNQVPIRKDNFAYRLV 73

Query: 92  -----FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                                +      A+  K    L+     +           R+ +
Sbjct: 74  QLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKK--TLESQVLTVSQSQKKEDYQTRKIL 131

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
               +I+ + I+V   H   +    S              + + L+++     E+ VP  
Sbjct: 132 IGKTKIDDQDIFVSSCHFSWWTDKKSGFY----------FEWKNLENY---FLETRVPLF 178

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFV 261
             GDFN  ++  G        +   DS +   ++  +       +  +    K+ ID+  
Sbjct: 179 FLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEKLRIDFIF 238

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +          E      Y           +SDH  + I+ D
Sbjct: 239 V---------PEGMQVKKYQRIFDGIDSPIISDHYGVEIELD 271


>gi|254716967|ref|ZP_05178778.1| Exodeoxyribonuclease III [Brucella ceti M13/05/1]
          Length = 191

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 53/175 (30%), Gaps = 36/175 (20%)

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
             +   + V+ ++L +   +D+ +  Y  S        Q L++W  ++     P V+AGD
Sbjct: 28  STDTGVVRVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEEPLVLAGD 81

Query: 211 FNRKI---NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANKNLRNKI- 255
           +N      +           +             N       +              +  
Sbjct: 82  YNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYSFWDYQAG 141

Query: 256 --------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    ID+ ++   A    I  +  + +          ++ SDH P+++  
Sbjct: 142 AWQKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTVTL 189


>gi|149369902|ref|ZP_01889753.1| hypothetical protein SCB49_02474 [unidentified eubacterium SCB49]
 gi|149356393|gb|EDM44949.1| hypothetical protein SCB49_02474 [unidentified eubacterium SCB49]
          Length = 308

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 86/289 (29%), Gaps = 51/289 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-----NA 79
            ++SWNI                 +  ++   +    K  D DIV +QE+ +       A
Sbjct: 59  SIISWNIRDFG-----------QSKNDTEIKAIATIVK--DFDIVLIQEVVAKHPGGAQA 105

Query: 80  VAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           VAK+  + N     +            +      A   +   V +  + +          
Sbjct: 106 VAKLADQLNRMGSKWDYSISDPTKSPSAYMSERYAYLWKTARVSLKGKPFLDKELSSLVY 165

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R          G    +  I+  S    D  EN               ++ ++   
Sbjct: 166 ----REPYIAHFLFKGTSKPIAVINYHSRKHDDHPEN--------------EIQHFLDYN 207

Query: 199 KE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNK 254
           K       ++ GDFN    +   N  +         N       K KD     +      
Sbjct: 208 KRLKTDNILLCGDFNLNEAHPVWNSFYDNGYKNAISNTPTTLKMKCKDGNYLNHSIDNMY 267

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              D+ +    +  F+ +           +  ++ ++LSDH P+SI+++
Sbjct: 268 WQGDFTITSAGSLDFIQKC----------ENLTKARQLSDHLPVSINFN 306


>gi|212690557|ref|ZP_03298685.1| hypothetical protein BACDOR_00042 [Bacteroides dorei DSM 17855]
 gi|212666906|gb|EEB27478.1| hypothetical protein BACDOR_00042 [Bacteroides dorei DSM 17855]
          Length = 312

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 89/339 (26%), Gaps = 81/339 (23%)

Query: 1   MIRK-----YVLALVFFLVPCTAS--VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           M++       +   +F L  CT S    + + ++SWN+              S       
Sbjct: 1   MMKTRNLIGMIAFYLFALAACTPSKESEKTLTVLSWNVWHGGH---------SKTYPEKG 51

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
                   K  +AD++ + E                   Y    ++  S   S N I   
Sbjct: 52  CKGTIDILKKSEADVILMVET------------------YGAAPMVADSLGYSYNLISDN 93

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + +  +   + + ++    +  +F          +++++NGK + V D  L     +   
Sbjct: 94  LCIYSRYPIIRKYAFADSISTFNFGG--------VMIDVNGKPVRVFDTWLHYLPDMRLA 145

Query: 174 ENTYSPSCS-------LLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDF 224
               S              ++   +   +          P ++ GDFN   +        
Sbjct: 146 PTDKSEEEILAWEMEGTRDEEIHRILAVLRPLLAETDSIPIIMGGDFNVHSHLDWTEAT- 204

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------------------------PI 257
            + +  +   +       +   A      +                             I
Sbjct: 205 -RNLYHHGGAVVDWPVSIAMEKAGFKDSFREMNPDPVASPGVTWLADADSLETECRMDRI 263

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-KRLSDH 295
           D+        + +  E +   L      K       SDH
Sbjct: 264 DFIYYQGKTIQAIASECYDNSLGKTFTFKGEDFFYPSDH 302


>gi|71423692|ref|XP_812538.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL
           Brener]
 gi|70877328|gb|EAN90687.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi]
          Length = 401

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 80/318 (25%), Gaps = 67/318 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80
           ++ ++WN+  L                  D   +++  +    D + LQE          
Sbjct: 102 LKFITWNVAGLRGL------------LRKDGQAIQRLLEEERPDALCLQETKLNPDDPQN 149

Query: 81  AKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
            K+     +C      R    +S   +      A   +   V+             S   
Sbjct: 150 GKLGEVPGYCFVDHVCRAKKGYSGTRTYIKNTAAAEWKTVTVKGFGTLKSPQDVGHSDGD 209

Query: 140 AGNRRAVELLVEINGK-----KIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKD 193
              R  +       GK      + +++ ++ +    L+ L          + Q    L  
Sbjct: 210 EEGR-VLTTYFGTQGKGSETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCALGR 268

Query: 194 WITQKKESLVP-----FVIAGDFNR-------------------KINYLGNNDDFWKTID 229
                KE         F+ AGD N                              F +T+ 
Sbjct: 269 SYNHGKEEGDAPSLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLR 328

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILY 280
             +++  F                +           +DYFV+     + ++         
Sbjct: 329 VANAVDTFRALYPKAAPVYTFWSARINGRARGLGWRLDYFVVSAALARHVVDC------- 381

Query: 281 NEDDIKSRGKRLSDHCPI 298
                       SDHCP+
Sbjct: 382 ----FTMPHVMGSDHCPL 395


>gi|322698029|gb|EFY89803.1| sphingomyelinase family protein, putative [Metarhizium acridum CQMa
           102]
          Length = 480

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/346 (11%), Positives = 80/346 (23%), Gaps = 82/346 (23%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMG 75
            ++  ++ L++ N   L     +                + +    L+    IV LQE  
Sbjct: 21  PTLPSELTLLTLNCWGLLHVSALRTP---------RLAEIGRQIATLEPTPHIVCLQECW 71

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----- 130
                      +   I  +T  ++ H K   +      +A+  +        +P      
Sbjct: 72  --------VQDDYHGIRDATRAILPHGKFYHSGAFGGGLAILSRWPIEESSMFPYKLNGR 123

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             A         +      V     +  ++++               S  C   + QA  
Sbjct: 124 PTAFWRGDWYVGKGVATAKVRYGPGRKDIIEVFNTHTHAPYESGPNDSYLC-HRTAQAWD 182

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPND---------- 232
           +   +    +     V  GDFN     L            D W+ + P+           
Sbjct: 183 IAKLVRGATDRGHLVVALGDFNMIPLSLAYRIITSGAPIRDTWRILHPDSSIGASDQAEE 242

Query: 233 --------------SLIRFPKEKDSRCNANKNLRNK------------------IPIDYF 260
                          +     +             K                    IDY 
Sbjct: 243 KARGLPVPTAEHNIRVNGAASDTVYNTWRWSKRDQKKLKHDPCSVDPDTKDPQGKRIDYV 302

Query: 261 VMD----QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       ++++ +  EI             LSDH  +    
Sbjct: 303 FASTGDVSGGTGWIVKSAAVEI---TGRHPELNCSLSDHFGVRTTL 345


>gi|170031984|ref|XP_001843863.1| synaptojanin [Culex quinquefasciatus]
 gi|167871443|gb|EDS34826.1| synaptojanin [Culex quinquefasciatus]
          Length = 1236

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 79/334 (23%), Gaps = 57/334 (17%)

Query: 21  AQKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ---YAKNLDA--------D 67
             ++R+   ++N+N       V+    S+     D   L +                  D
Sbjct: 535 PSEIRVACGTYNVNGGKHFRSVAYKDVSLADWLLDCHRLARSRSLVDVSHPEDTNEPPID 594

Query: 68  I--VFLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVR 117
           I  V  QE+   NA   V         W          +             +     +R
Sbjct: 595 IFAVGFQEIVDLNASNIVAASSDNAKAWAEELQKVISRDEEYVLLTYQQLVGVCLYIYIR 654

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            ++   ++               GN+ A  +   ING  I  +  H  +        N  
Sbjct: 655 PRHAAYIRDVAIDCVKTGLGGATGNKGAAAIRFVINGTSICFVCAHFAAGQSQVVERNAD 714

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------N 221
               +        +   + +  +S       GDFN +I+                     
Sbjct: 715 YAEITRK------IAFPMGRSLKSHDYIFWCGDFNYRIDMDKEELKESLKQGDIESVLQY 768

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKF 269
           D      +       F + + S     K                    D  +  +     
Sbjct: 769 DQLRIQQNTGSVFNDFFEGEISFPPTYKYDLFSDDYDTSEKARAPAWTDRVLWRRRKQSP 828

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +  +              + SDH P+    D
Sbjct: 829 DADKQPNWNPGRLVHYGRAELKQSDHRPVIAIID 862


>gi|239793078|dbj|BAH72965.1| cytolethal distending toxin B [Escherichia coli]
          Length = 269

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 103/304 (33%), Gaps = 43/304 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++KY+++L+ FL     +     R+ +WN+   S         N           +RQ  
Sbjct: 1   MKKYIISLIVFLSFYAQADLTDFRVATWNLQGASATTESKWNIN-----------VRQLI 49

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              +A DI+ +QE GS  + A            +   + +          + +   R + 
Sbjct: 50  SGENAVDILAVQEAGSPPSTA----------VDTGRVIPSPGIPVRELIWNLSTNSRPQQ 99

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVEL----LVEINGKKIWVLDIHLKSFCFLDSLENT 176
           V +   +   LG + + +   NRRA E+     V   G+ +  + I   +F    ++   
Sbjct: 100 VYIYFSAVDALGGRVNLALVSNRRADEVFVLSPVRQGGRPLLGIRIGNDAFFTAHAIAMR 159

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + + +L+ +   + +D         + ++I GDFNR+   L  N               
Sbjct: 160 NNDAPALVEEVYTFFRDS-RDPVHQALNWMILGDFNREPADLEMNLTVPVRRASEIISPA 218

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              +   R            +DY V   +            +         R +  SDH 
Sbjct: 219 VATQTSQRT-----------LDYAVAGNSVAFRPSP-----LQAGIVYGARRTQISSDHF 262

Query: 297 PISI 300
           P+ +
Sbjct: 263 PVGV 266


>gi|257092320|ref|YP_003165961.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044844|gb|ACV34032.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 266

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 85/307 (27%), Gaps = 76/307 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +                 +    L  ++   +A I+ LQE+ + +A    
Sbjct: 2   LRIITLNLNGIRS---------------AWRKGLYSWSVAQNAHIICLQELKAQHA---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                          ++   R + N  ++ + +  +               D   R    
Sbjct: 43  ----DLGDEMHKPDGLHTYYRYAENKGYSGVGLWCRKKPDRVVDVLGSPEFDREGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 +  +   + V+ ++  S    +  +       +L+      L         S  
Sbjct: 96  ------LRADFGALSVVCLYQPSGSSSEQRQEAKFRFMALIYPHLLELAA-------SGR 142

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKD-SRCN 246
             V+ GD+N                             + ++       + +    S   
Sbjct: 143 DVVVCGDWNIAHQEIDLKNWRSNRRNSGFLPEERAWVSRLLNEGGWCDVYRRLHPESTEE 202

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           +     N+           +DY +            +             + +R SDH P
Sbjct: 203 SYTWWSNRGQAWAKNVGWRLDYQLATPAIAATARHAAV-----------YKEQRFSDHAP 251

Query: 298 ISIDYDF 304
           ++IDY++
Sbjct: 252 LTIDYEY 258


>gi|237707987|ref|ZP_04538468.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229457973|gb|EEO63694.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 312

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/337 (11%), Positives = 83/337 (24%), Gaps = 77/337 (22%)

Query: 1   MIRKY----VLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           M++      ++A   F +       +    + ++SWN+              S       
Sbjct: 1   MMKTRNLIGMIAFCLFALAACTPSKESEKTLTVLSWNVWHGGH---------SKTYPEKG 51

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
                   K  +AD++ + E                   Y    ++  S   S N I   
Sbjct: 52  CKGTIDILKKSEADVILMVET------------------YGAAPMVADSLGYSYNLISDN 93

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + +  +   + + ++    +  +F          +++++NGK + V D  L     +   
Sbjct: 94  LCIYSRYPIIRKYAFADSISTFNFGG--------VMIDVNGKPVRVFDTWLHYLPDMRLA 145

Query: 174 ENTYSPSCS-------LLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDF 224
               S              ++   +   +          P ++ GDFN   +        
Sbjct: 146 PTDKSEEEILAWEMEGTRDEEIHRILTVLRPLLAETDSIPIIMGGDFNVHSHLDWTEATR 205

Query: 225 WKTIDPNDSLIRF---------------PKEKDSRCNANKNLRNKI----------PIDY 259
                    +                      D   +                    ID+
Sbjct: 206 NLYHHGGAVVDWPVSIAMEKAEFKDSFREMNPDPVASPGVTWLADADSLETECRMDRIDF 265

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRG-KRLSDH 295
                   + +  E +   L      K       SDH
Sbjct: 266 IYYQGKTIQAIASECYDNSLGKTFTFKGEDFFYPSDH 302


>gi|331702659|ref|YP_004399618.1| endonuclease/exonuclease/phosphatase [Lactobacillus buchneri NRRL
           B-30929]
 gi|329130002|gb|AEB74555.1| Endonuclease/exonuclease/phosphatase [Lactobacillus buchneri NRRL
           B-30929]
          Length = 355

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 63/322 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--------DYTLLRQYAKNLDADIVFLQE 73
              + +++NI   +  +  S + +  K + +        D   + Q  K  D  ++F QE
Sbjct: 53  HPYKAMTFNIGYAAYPDNYSFFMDGGKYSRAFSKFSVLNDLNGIYQAVKQEDPALMFFQE 112

Query: 74  MGSYNAVAKVFPKNTW-----CIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVR 122
           + +    +    +  W       + S      +S               + +    +   
Sbjct: 113 VDTDGDRSFHVNEVQWLRDRMNGYSSVYAQNYNSAYLFYPLTRPIGKAKSGLLTLAQAKI 172

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                Y L    D        RA+ +      NG ++ V+++HL +F            +
Sbjct: 173 ADSTRYQLPIDTDFNKFMDLDRAISVTHIPVANGHQLAVINLHLSAFT----------KN 222

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK-----------------INYLGNNDD 223
             +   Q   L   +T ++++    ++AGD+N                     +    D 
Sbjct: 223 AKVRKAQINKLFAKMTTEQQAGNYVIVAGDYNHDMLGNSPAVFETTSKPMNWTHPFPADQ 282

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLR---NKIPIDYFVMDQNAYKFLIQESFSEILY 280
             K        +   K    R N             ID F++  N     +         
Sbjct: 283 LPKGFRIAKQGLAQAKVPSVRANGTPYHPGKTFTSIIDGFIVSDNVQVNRV--------- 333

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
               +KS G + SDH P  +D+
Sbjct: 334 ---HVKSLGFKNSDHNPEVMDF 352


>gi|285017195|ref|YP_003374906.1| exodeoxyribonuclease III protein [Xanthomonas albilineans GPE PC73]
 gi|283472413|emb|CBA14918.1| probable exodeoxyribonuclease III protein [Xanthomonas albilineans]
          Length = 266

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 88/315 (27%), Gaps = 87/315 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VS+N N L        +               ++      D++ +QE    +     
Sbjct: 1   MRIVSFNANGLRSAATKGFF---------------EWFAGQQTDVLCVQETKAQAPQLAG 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             F    + +++         +  S    ++ +A+  K      ++       D   R  
Sbjct: 46  PAFLPEGYRVWF---------RDASTKKGYSGVAIYSKREPDEVRTALGWPEFDEEGRY- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +E+   ++ V+  ++ S    +  +           Q   WL+  + Q   +
Sbjct: 96  --------LEVRFGQLSVVSFYIPSGSSGEVRQGYK-------FQVMDWLRPILVQWLHN 140

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTID-------------------------PNDSLIR 236
              +V+ GD+N   + L   +      +                              + 
Sbjct: 141 GRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPAERDWLNGLCADRAEDADAASGRGWVD 200

Query: 237 FPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +             N+           IDY  +  +  + L   +             
Sbjct: 201 AYRALHPDGQDYTWWSNRGAARANDVGWRIDYQFVTPSLRERLHGCAI-----------Y 249

Query: 288 RGKRLSDHCPISIDY 302
             +R SDH P ++DY
Sbjct: 250 TEQRFSDHAPFTVDY 264


>gi|242023630|ref|XP_002432235.1| Nocturnin, putative [Pediculus humanus corporis]
 gi|212517632|gb|EEB19497.1| Nocturnin, putative [Pediculus humanus corporis]
          Length = 525

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 90/351 (25%), Gaps = 78/351 (22%)

Query: 24  VRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76
           + +VS+N+ + S     +           +      LL +  K  DADI+ LQE+ S   
Sbjct: 174 ITVVSYNVLSQSLLEKHRYLYKRNDEKSLKWEVRSKLLIEEIKEFDADILCLQEIDSSLV 233

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +          +   Y                      V+   V + ++S  LL   + 
Sbjct: 234 NSFYNYNLNLLGYQGIYKQRTNEKVDGCAIYYKRDKFNLVKYMTVELFKRSVHLLDRDNI 293

Query: 137 FSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                    ++L ++ N K +  V   HL        ++   +       ++  + K   
Sbjct: 294 G------IILKLTMKSNPKSEFVVATTHLLYNPKRGDIKLAQTQLMLAEIEKMAYAKHNA 347

Query: 196 TQKKESLVPFVIAGDFNRKI---------NYLGNNDDFW--------------------- 225
             ++   +P +  GD N                  +                        
Sbjct: 348 LARQPEYLPIIFTGDMNYSPENGVYQLVTKSYLEYEGMSSEKILPSLRGHILNKTLLPPR 407

Query: 226 -------KTIDPNDSLIRFPKEKDSRCN--------------ANKNLRNKIPIDYFVMDQ 264
                  + ++    +       D   N              A  N  + + +DY    Q
Sbjct: 408 IGITDSCQYVENAGEVSFSTGALDHHLNLESVYEHVKGNLPEATTNQNHWVTVDYIFYSQ 467

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKR-------------LSDHCPISIDY 302
                L  +S   +           +               SDH P+   +
Sbjct: 468 LWNDNLKLKSEGNLKLISRLTLPNSREAEVYLRYLPNLACASDHLPLRATF 518


>gi|269954850|ref|YP_003324639.1| endonuclease/exonuclease/phosphatase [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269303531|gb|ACZ29081.1| Endonuclease/exonuclease/phosphatase [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 329

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 64/210 (30%), Gaps = 42/210 (20%)

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEINGKK 156
             + ++     IA+  +      +        P L  +        R AV  +VE     
Sbjct: 143 GDEPDDVPAYGIALISRYPVRQWRQVRLPLGSPWLFGRLQLGTDQPRVAVCAVVETPDGP 202

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           + V+  HL S    +               Q +WL + +     +  P V+ GD N +  
Sbjct: 203 LTVVTTHLSSGSTWN-------------QTQLRWLAERLR---GAPRPLVLMGDLNLR-G 245

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD---QNAYKFLIQE 273
            +      W+ +   D                   R  I ID+ ++D       + +   
Sbjct: 246 SVPTELTGWRDLVEID--------------TYPRHRPWIGIDHVLVDDVAPAVGEPIDPG 291

Query: 274 SFSEILYNEDDIKSR--GKRLSDHCPISID 301
           +            +R     +SDHC + +D
Sbjct: 292 APHPGGRVHSLAPARAVDLGISDHCAVVVD 321



 Score = 42.6 bits (98), Expect = 0.073,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 11/65 (16%)

Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
          A  +RL ++N+      +G             D   L      L AD+V LQE+      
Sbjct: 3  AMSLRLATFNVQHGRMPDG-----------RVDPPFLAAAVSTLRADVVALQEVDRGQVR 51

Query: 81 AKVFP 85
          +    
Sbjct: 52 SAGAD 56


>gi|47215581|emb|CAG10752.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 498

 Score = 63.0 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 90/356 (25%), Gaps = 82/356 (23%)

Query: 23  KVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            VR+VS+N+         LS+            +      L+++     +ADIV LQE+ 
Sbjct: 151 TVRVVSYNVLADVYAQTELSKTVLYPYCAPYALQLDYRQNLIKKELSGYNADIVCLQEVD 210

Query: 76  SYNAVA----KVFPK------------------------------------NTWCIFYST 95
              ++     ++F                                      +      +T
Sbjct: 211 KGRSIRTFSLRLFGPIARTHAGLGCPSSGVFADSLTPALDAFGLDGVFRIKDKQHEGLAT 270

Query: 96  ERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL-- 148
                 +        H      A+     +  +L+        K+   +      V +  
Sbjct: 271 FYRSQAAGGFRLLSQHDVVLSVALTSHHIHSELLESISANGALKEKMLKRSTSLQVSVLE 330

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
            + + G+K+ V + HL       ++          +    + L   I++      P V  
Sbjct: 331 DLTVPGRKVCVANTHLYWHPKGGNIR------LFQMGVALKHLSHVISE-AAPGAPLVFC 383

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-------------------NANK 249
           GDFN   +  G      +   P           D  C                     N 
Sbjct: 384 GDFNSSPDS-GVFRLMTEAAVPQQHADWSSSGPDESCSTELLSAFPPFLSACAQPAYTNY 442

Query: 250 NLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  +DY  +  +      +    +                SDH  +  D  +
Sbjct: 443 VGGFHGCLDYIFIQPHKMQVEQVIPLPTHQEVTTYAALPSVAHPSDHIALVCDLRW 498


>gi|325283015|ref|YP_004255556.1| exodeoxyribonuclease III Xth [Deinococcus proteolyticus MRP]
 gi|324314824|gb|ADY25939.1| exodeoxyribonuclease III Xth [Deinococcus proteolyticus MRP]
          Length = 264

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 77/300 (25%), Gaps = 80/300 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + + N+N L                 +    L  +      D++ LQE+ +  A+ +V
Sbjct: 15  LTVTTLNLNGLRS---------------ARRKGLEDWLTRHAPDVLLLQEVRAP-AMPEV 58

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +   +   +   +          + +A+  +      +    LG       A  R
Sbjct: 59  LEALGYHSAWHPAQKAGY----------SGVAIASRLPLQDVR----LGMGHEAMDAEGR 104

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +       +    ++L S    +  ++                       + +  
Sbjct: 105 LISAQV-----AGVRFASVYLPSGSSGEVRQSFKDRLLLDYQIWTDR--------QRTQG 151

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN--------------DSLIRFPKEKDSRCNANK 249
           P VI GD+N     +   +      +                  L    +          
Sbjct: 152 PLVIGGDYNIAHQPIDLKNWRSNQNNSGFLPHEREWMTAHLASGLSDSHRLHLGERAEYT 211

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              N+           IDY +  Q              +   D    R  RLSDH P++ 
Sbjct: 212 WWSNRGQAYTNDTGWRIDYLLTSQ--------------VQTADVWVDRPARLSDHAPLTA 257


>gi|58271540|ref|XP_572926.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134115276|ref|XP_773936.1| hypothetical protein CNBH3880 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256564|gb|EAL19289.1| hypothetical protein CNBH3880 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229185|gb|AAW45619.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 654

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 70/298 (23%), Gaps = 59/298 (19%)

Query: 53  DYTLLRQYAKNLDADIVFLQE---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
               +      LDA I   QE   + +    +   P      +        +S   +  D
Sbjct: 30  KKKNIEGLLDELDAQIFCFQEHKTVRTRLEKSMACPGPYDGFWTFPRSKTGYSGVCTYVD 89

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV-------EINGKKIWV--- 159
               + ++ +           L           R      V       E++G K  V   
Sbjct: 90  SRYCVPLKAEEGITGLLLGDRLSTMKPPWTDAERIGSYPDVNDMEWMDELDGTKFDVKKL 149

Query: 160 ------LDIHLKSFCFLDSLENTYSPSCSL--LSQQAQWLKDWITQKKESLVPFVIAGDF 211
                 +      F   +      + S            L++ +   + +    ++ GD 
Sbjct: 150 DMEGRAVVCDFGLFVLFNLYCPNETNSARRPYKMNYLHALQERVQLLQAAGREVMLVGDI 209

Query: 212 NR-----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDS------RCNA- 247
           N                  +               P   +I   +E          C   
Sbjct: 210 NIVRQPMDSGEGPVRSSAEQHYSHPARRILDDWCAPKGPMIDVVRESWPQRDDMFTCWNQ 269

Query: 248 ---NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ++      IDY +       ++        +Y            SDHCP+ +D 
Sbjct: 270 KLDARSANYGSRIDYVLCTPGLRPWIKGGDILPKVY-----------GSDHCPVYVDL 316


>gi|28198064|ref|NP_778378.1| exodeoxyribonuclease [Xylella fastidiosa Temecula1]
 gi|182680692|ref|YP_001828852.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23]
 gi|28056124|gb|AAO28027.1| exodeoxyribonuclease [Xylella fastidiosa Temecula1]
 gi|182630802|gb|ACB91578.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23]
          Length = 266

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 87/313 (27%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+N N L        +                +    D D++ +QE+       ++
Sbjct: 1   MRISSFNANGLRSALSKGFF---------------DWFSTQDIDVLCVQEI--KAQRHQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +   Y         +  +    ++ +A+  +      ++       D   R    
Sbjct: 44  VGPDFFPAGYHVCF-----RDATIKKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE     + V+  ++ S    +  ++             +WL+  + +   S  
Sbjct: 96  ------VEARFGNLSVVSFYIPSGSSGEKRQHYKFEV-------MRWLRPILCEWLLSGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID-------------------------PNDSLIRFP 238
            +V+ GD+N   + L   +      +                              +   
Sbjct: 143 DYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDWLNGLCADSLHDVNSAQGRGWVDTY 202

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +    +        N+           IDY  +     + + + +               
Sbjct: 203 RVLHPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPGLRERVSRCAI-----------YCE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P +++Y
Sbjct: 252 QRFSDHAPYTVEY 264


>gi|83942178|ref|ZP_00954640.1| hypothetical protein EE36_08078 [Sulfitobacter sp. EE-36]
 gi|83847998|gb|EAP85873.1| hypothetical protein EE36_08078 [Sulfitobacter sp. EE-36]
          Length = 314

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 93/331 (28%), Gaps = 67/331 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75
           A+ +R+ ++N   LS      L ++  K +    T + +   ++ ADI+ LQ +      
Sbjct: 2   AEPLRIATFNTE-LSRAGPGLLLRDIAKGSDPQITAVTRLLADVAADIIVLQGVDYDLSG 60

Query: 76  -SYNAVAKVFP--KNTWCIFYSTERLINH-----------------SKRDSNNDIHTAIA 115
            +  A+A        ++   ++                         +         A+A
Sbjct: 61  TTLGALADRLGEAGPSYPYRFALPPNAGRPTGLDMDGDGKTGGARDGQGYGRFFGAGALA 120

Query: 116 VRKKNVRV----------LQQSYPLLGAKDSFSRAGN------------RRAVELLVEIN 153
           +  +   +          L +  P      +                    A  + ++I 
Sbjct: 121 ILSRYPVLRTDVQDYSDFLWRDLPDALLPQTDGAPFPSAAAQEVQRLASHGAWVVPLDIP 180

Query: 154 GK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
            +  + +L  +     F    +     +   +     +L    +        F++ GD N
Sbjct: 181 DQAPLTLLTFYATPPVFDGPEDRNGKRNHDEILFWDHYLAG--SFGPPPTDRFILLGDAN 238

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                        +T+  + +L      + +           + +DY +   +    ++ 
Sbjct: 239 LDPAKGEGLRAAIQTLLDHPALHDPLAGQPTVTFDGLGD---MRVDYLL--PSTDWRVVA 293

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                         +R    S H  + +D D
Sbjct: 294 AGV-----------ARDPAASRHGVVWVDLD 313


>gi|169350875|ref|ZP_02867813.1| hypothetical protein CLOSPI_01649 [Clostridium spiroforme DSM 1552]
 gi|169292461|gb|EDS74594.1| hypothetical protein CLOSPI_01649 [Clostridium spiroforme DSM 1552]
          Length = 1524

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 73/282 (25%), Gaps = 57/282 (20%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + ++ + S+NI                     +   +    +     +  +QE+  + + 
Sbjct: 819  SNEINIASFNI---------------AANRHPNIAAISDLMEEKQITVAGVQEVDVFTSR 863

Query: 81   AKVFPKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                  +    F +         +           + +  +N    Q    L        
Sbjct: 864  N---NYDMMQEFVNQGYFGYSHFQKAIDYGGGEYGVGIVSQNELSGQSGASLPSLPGIEG 920

Query: 139  RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            RA  R       E +GK I +   HL                  +  QQ + + + +   
Sbjct: 921  RAYAR----AEFEKDGKTIAIYSTHLSY------------EDSDIRRQQIETIINAMD-- 962

Query: 199  KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +     ++ GDFN   +              N     + +              +  ID
Sbjct: 963  ADPTPYKILTGDFNTGDSNSEFYPFLRNYNIANGKDDVWLETIGDTAEGA-----RREID 1017

Query: 259  YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +  +N                 + +++  + LSDH  +  
Sbjct: 1018 NIITTRNI--------------KINTVETVNEGLSDHYMLYA 1045


>gi|86740550|ref|YP_480950.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
 gi|86567412|gb|ABD11221.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
          Length = 309

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 89/325 (27%), Gaps = 79/325 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80
           +VR  ++N   L   +               Y  + +  + LDAD+V +QE+        
Sbjct: 3   QVRFATYNTLDLFASDS--------PDERERYRRVVEVIRGLDADVVAVQEIIAPDVEVA 54

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A                  N     +         + +  + V+  S+   GA D +   
Sbjct: 55  AGRLRTLADDAGMECTYEPNRPAIAAGRQRFHVGLLWRPGLSVVPGSFRTYGAADFWH-- 112

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                 ++ +EI G++I     H   F               + + Q + +   +T+ + 
Sbjct: 113 ---ALAKITIEIAGRQIQHASHHATPFGRH------------MRADQMERVVAVMTRPEG 157

Query: 201 SLVPFVIAGDFN------------RKINYLGNNDDFWKT--------------------- 227
           S  P +I  D+N               +   ++D +                        
Sbjct: 158 SP-PGLIGADWNCVGADRRPDGSYYDPDPYADSDWYADLIYQTVWGYDERGRRRHRADRE 216

Query: 228 ---------IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                    +     ++  P E            ++  ID   +       L        
Sbjct: 217 PGEVLYAGGLADAAVVLDRPWEATVGHWPGNTFGDR-RIDAIRVTAEIAPALRAVEV--- 272

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
                      +  SDH P+++ Y+
Sbjct: 273 -----TRTELARSASDHLPVTVTYE 292


>gi|71894913|ref|NP_001026376.1| protein angel homolog 1 [Gallus gallus]
 gi|53133676|emb|CAG32167.1| hypothetical protein RCJMB04_19e20 [Gallus gallus]
          Length = 662

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/203 (10%), Positives = 56/203 (27%), Gaps = 6/203 (2%)

Query: 23  KVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + R++S+NI          +        +         + Q  ++ D D++ LQE+   +
Sbjct: 249 EFRVMSYNILAQDLMEQGHDLYLHCHPDILNWDYRLPNILQEIQHWDPDVLCLQEVQENH 308

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      F         + R ++         R + + V    Y   G      
Sbjct: 309 YREQLEPTFVKMGF--ACFYKRRTGRKTDGCAVCYKQSRFQLITVSPIEYFRPGLDVLNR 366

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  +   +   G  +  +     +   +           + ++     +       
Sbjct: 367 DNVGLVLLLQPLLPEGLDLKAVSPLCVANTHVLFNPRRGDIKLAQMALLLAEIDKIAKTA 426

Query: 199 KESLVPFVIAGDFNRKINYLGNN 221
           +    P ++ GD N   +     
Sbjct: 427 EGQYYPVILCGDLNSVPDSPLYK 449


>gi|82793510|ref|XP_728069.1| endonuclease/exonuclease/phosphatase [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23484232|gb|EAA19634.1| Endonuclease/Exonuclease/phosphatase family, putative [Plasmodium
           yoelii yoelii]
          Length = 827

 Score = 63.0 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/355 (11%), Positives = 96/355 (27%), Gaps = 78/355 (21%)

Query: 20  VAQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
               +R++S+NI          + +           +T     LL       D DI+ LQ
Sbjct: 479 AKNTIRILSYNILAPIYTNTKYATEYMFRNINPCYLKTNYRSHLLISEIN-HDFDIISLQ 537

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+      ++    N +C++       ++  +  + +   ++ V KK   +++       
Sbjct: 538 EV------SEYLHTNLFCVYLYENYYSSYKPKSPHGNDGCSLFVNKKKFSLIEYENCEFN 591

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIW------------VLDIHLKSFCFLDSLENTYSPS 180
                    N     + +  +  +I             + +     F   ++    +S +
Sbjct: 592 TVIRNPELKNIYDTFIKISDDLDEIINEIKTVYQIGIFMHNNSQNIFIIANTHLYFHSLA 651

Query: 181 CSLLSQQAQWLKDWITQKKESLV--------PFVIAGDFNRKINYL-------------- 218
             +   Q   +   + + K              ++ GDFN                    
Sbjct: 652 QHIRVIQVYCMLHILEKIKNKYKDKYKNKEIYVILNGDFNTNFESEVFSFLQGNDVMENS 711

Query: 219 ----------GNNDDFWK-------------------TIDPNDSLIRFPKEKDSR-CNAN 248
                        DD  K                    ++    L  +   K       N
Sbjct: 712 KLWENGKLFKKEYDDLNKYPTLFNIDNNSNDQKINGPYLNRKKFLPLYSAYKKVDIPYTN 771

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            N      +DY  +        + +   + ++++          SDH  I+ + +
Sbjct: 772 WNNNFIDVLDYIFLSPELKVKRVLKGVDKDIFDQYKGIVSPFNPSDHLSIAAEIE 826


>gi|322492628|emb|CBZ27905.1| putative RNA-editing complex protein MP100 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 986

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/330 (11%), Positives = 82/330 (24%), Gaps = 40/330 (12%)

Query: 12  FLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLW--KNSVKRTTSDYTLLRQYAKNL 64
           F+   T + A       +R+++WN+         +          +   Y +L +     
Sbjct: 657 FMAATTVTSADAAEVPTLRVLTWNVMFDRYSNQPTPLGMPGIDWCSPKRYPVLAKLIDAE 716

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DAD+V +QE+    A            +  +    +         +      R    ++ 
Sbjct: 717 DADVVGMQEVERPFAEYLAAQPWCRERYIMSCSPQSPILDPWGVLLLVRRGGRWPLQQLK 776

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK-------------SFCFLD 171
             + P      S                +           K             + C + 
Sbjct: 777 HLNVPAWPGHVSLMPVATLDLSAAAAHSDDSGTGGGGSAGKSGSRKLAALPRVVNVCSMH 836

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
            L      +    + Q Q L+  +T++       ++ GDFN   +         + ++  
Sbjct: 837 LLAPFVKVNEVARTGQDQALRHALTRQLHGDT--LVMGDFNDWPSNEFLMPPESRYVECW 894

Query: 232 DSLIRFPKE-KDSRCNANKNLR----NKIPIDYFV-----MDQNAYKFLIQESFSEILYN 281
             +            N    L+         D                 +       L  
Sbjct: 895 PIIHPGDYGKTMDESNTFCKLKIEEIFFGRSDKVFLRTGTATAAGLTRGVLRPVEAHLVG 954

Query: 282 EDDIKSRG--------KRLSDHCPISIDYD 303
              + +             SDH  +S+ ++
Sbjct: 955 TRSVNAENGNQEAPAYLFPSDHYGVSMQFE 984


>gi|240849689|ref|YP_002971077.1| endonuclease/exonuclease/phosphatase family protein [Bartonella
           grahamii as4aup]
 gi|240266812|gb|ACS50400.1| endonuclease/exonuclease/phosphatase family protein [Bartonella
           grahamii as4aup]
          Length = 287

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 75/281 (26%), Gaps = 51/281 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + S+N++     + +                + +    L  DI+ LQE         
Sbjct: 47  DLTVASYNVHKCVGVDKIFNPT-----------RIVRVITELQVDILALQEADRRFGERV 95

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +    +  +    +       A+  +   V          + +      
Sbjct: 96  GLINLQLLKAETGLIPVPLNTMSPHGHGWHGNALFLRKGYVRD------TLQVTLPSIEP 149

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV + +E+    I ++  H     +                QQ + L +     K SL
Sbjct: 150 RGAVIVELEMAAGPIRIIAAHFGLLRYS-------------RKQQTKMLLEIFQ--KRSL 194

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P ++ GDFN         +         +    +         +  +    + +D    
Sbjct: 195 MPTLLIGDFN---------EWRMGKGSSLNHFSPYFDSTFEVVPSFPSRFPFLALDRVF- 244

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +    L+    +             +  SDH PI    +
Sbjct: 245 --SFPHQLVTSIENHH-------SPLARIASDHLPIKAYLN 276


>gi|82408358|gb|ABB73028.1| mannose-6-phosphatase [Phanerochaete chrysosporium]
          Length = 354

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/357 (9%), Positives = 77/357 (21%), Gaps = 72/357 (20%)

Query: 5   YVLALVFFLVPCTA-------SVAQKVRLVSWNINTLSEQEGVS---------------- 41
           ++L         +             VR+ ++N+   S  + ++                
Sbjct: 10  FLLGFFCLKAASSVVWKRAVMPANGSVRVATYNLRFDSMPDNITVQQTLAALPDPLTAPP 69

Query: 42  -LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERL 98
            L K   +  ++    + Q   +    +  +QE  +   N +A +     W         
Sbjct: 70  FLGKTGEQPWSTRRIKVWQDLMSEGVVLFGIQEGLVRQVNDLATLLGS-EWAWIGVGRDD 128

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
              +   S    +      ++       + P             R      + +      
Sbjct: 129 GKQAGEFSAIFYNKNFIELREWDTFWLSNTPF-DVSRFPGAGSLRICTAARMTLKTTSGP 187

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           +   +L +     S       +  +L       +           P ++ GDFN      
Sbjct: 188 INFSYLNTHLDDQSDGQRRLGASLILQ------RARFEAFHSQGGPVIVTGDFNSPSTGT 241

Query: 219 GNNDDFW--------------------------KTIDPNDSLIRFPKEKDSRCNANKNLR 252
            +                                 +  +                     
Sbjct: 242 DSGAYMIATGALPPEPINATFAQTFAVPNGTLTNFVLDDLKAKAPRANVGGNFATFTGFN 301

Query: 253 NKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +         ID+      +        +       DD    G   SDH P+  D  
Sbjct: 302 SPGDTASFTRIDFVF--GGSNGKWTATQYKVGTSLTDD----GVLASDHRPVFADIT 352


>gi|317495660|ref|ZP_07954026.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424]
 gi|316914215|gb|EFV35695.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424]
          Length = 264

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/297 (9%), Positives = 80/297 (26%), Gaps = 54/297 (18%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76
           ++L++ N++  L E                   +L +       D++ +QE+        
Sbjct: 1   MKLLTINVHSWLEEN------------QLEKLNILAKTIVEKKYDVIAMQEVNQLISSEL 48

Query: 77  ------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                  +   K+             +          +     +A+  K   V  + +  
Sbjct: 49  IELGIREDNFGKLLLDKINEYGEQGYKYYWTYSHIGFDKFEEGLAILAKGDVVAVEDF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             A+ + +   +R+ +++ ++IN + +     H+               +          
Sbjct: 108 CTAQQTVTSIESRKILKVDLKINDEIVEFYSCHMNLPTCKGEDIEQNLYN---------- 157

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY--LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
               +    ++    +  GDFN               + +     +     +  +     
Sbjct: 158 ----LVNYTDNTNLKIFMGDFNTDYFNQVDEYKAILEQGLFDTYEMALKKDKGVTVYKNI 213

Query: 249 KNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +    +DY   ++          F+   Y           +SDH  + +  
Sbjct: 214 SGWEDSMCQKKLDYIFSNKKLNVEESYVIFNNENYPI---------ISDHNGLEVTL 261


>gi|302561082|ref|ZP_07313424.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus
           Tu4000]
 gi|302478700|gb|EFL41793.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus
           Tu4000]
          Length = 251

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 71/277 (25%), Gaps = 52/277 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+NI ++ +  G                 L +       D+V LQE   +    K 
Sbjct: 20  IRVLSYNIRSMRDDTG----------------ALARVIGACAPDLVLLQEAPRFFRWRKK 63

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +       S   L+  +   +        ++R    R      PL   +        R
Sbjct: 64  LAR-----LASETGLVVLTGGATAAGPAILCSLRATVERTEDVLLPLTPGQHR------R 112

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V   G ++ VL  HL                     +Q   L D +        
Sbjct: 113 GFATAVVRFGGARLGVLSCHLSLRQ-------------DERYEQGGMLLDRLAAM--GTE 157

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V  GD N + +                    +        +          ID  +  
Sbjct: 158 HAVAGGDLNERPDGRTFRRLT------ESLTDCWAAAPWGGEHTWVRDAPHRRIDALLAT 211

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +            +   +  D+ +      DH P+  
Sbjct: 212 KGVRVLGCGVPLGQPGVSGSDLAAAT----DHLPVLA 244


>gi|218189227|gb|EEC71654.1| hypothetical protein OsI_04097 [Oryza sativa Indica Group]
          Length = 321

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 96/309 (31%), Gaps = 70/309 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           ++++SWNIN L   + V+    S           R  A+  + D++ LQE     ++   
Sbjct: 51  MKILSWNINGL--HDVVTTKGFSA----------RDLAQRENFDVLCLQETHLEASLGVS 98

Query: 82  --KVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             ++       +      + ++    S   +   ++  AV  +   +  Q    +   D 
Sbjct: 99  AIRLLIYTEKDVEKFKNLIADYDSYWSCSVSRLGYSGTAVISRVKPISVQYGIGIREHDH 158

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             R         ++ +     ++++ ++ +   FL  L    +      S   + L+   
Sbjct: 159 EGR---------VITLEFDGFYLVNAYVPNSGRFLRRLNYRVNNWDPCFSNYVKILEK-- 207

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKE 240
                   P ++AGD N     +  +                + ++T   +  L+   ++
Sbjct: 208 ------SKPVIVAGDLNCARQSIDIHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRK 261

Query: 241 KDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +                      +DYF+  ++    +            D         S
Sbjct: 262 QHPNAVGYTFWGENQRITNKGWRLDYFLASESITDKVH-----------DSYILPDVSFS 310

Query: 294 DHCPISIDY 302
           DH PI +  
Sbjct: 311 DHSPIGLVL 319


>gi|224066090|ref|XP_002193790.1| PREDICTED: deoxyribonuclease I-like 3 [Taeniopygia guttata]
          Length = 491

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 60/200 (30%), Gaps = 17/200 (8%)

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           +N     A   R+  V V +Q+Y     +       +R    +  +     +        
Sbjct: 255 NNYKEQYAFIYRQDQVLV-KQTYQYPDTQPGDEDVFSREPFIIWFQSPKTAV----SEFA 309

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                 + +        L        + W       +  F+  GDFN   +Y+       
Sbjct: 310 FIPLHTTPDTAVREIDELYDVYLDVKQRW------KIENFIFMGDFNAGCSYVPKKQWKN 363

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDD 284
             +      +    +K+     N     + P D  V+      + ++  S +   + E+ 
Sbjct: 364 IRLRTYSEFLWLIGDKNDTTVKNTT---RCPYDRIVVRGQKLIQAVVPHSVNIFDFQEEF 420

Query: 285 IKSRGKRL--SDHCPISIDY 302
             +  + L  SDH P+  + 
Sbjct: 421 QMTEEQALGVSDHFPVEFEL 440



 Score = 48.8 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/235 (11%), Positives = 62/235 (26%), Gaps = 29/235 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78
            +++ S+N+ +  E                    + +       DI+ L E+        
Sbjct: 19  SLKICSFNVRSFGET---------KIARPEVIDAVVKIVSRC--DIMLLMEIKDSKNRVC 67

Query: 79  --AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              V K+  +                 R++  + + A   R+  V V +Q+Y     +  
Sbjct: 68  PLLVEKLTSQLKGPKEEYRCVASKRLGRNNYKEQY-AFIYRQDQVLV-KQTYQYPDTQPG 125

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                +R    +  +     +              + +        L        + W  
Sbjct: 126 DEDVFSREPFIIWFQSPKTAV----SEFAFIPLHTTPDTAVREIDELYDVYLDVKQRW-- 179

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                +  F+  GDFN   +Y+         +      +    +K+     N   
Sbjct: 180 ----KIENFIFMGDFNAGCSYVPKKQWKNIRLRTYSEFLWLIGDKNDTTVKNTTR 230


>gi|145332625|ref|NP_001078178.1| unknown protein [Arabidopsis thaliana]
 gi|215275270|sp|Q9LS39|CCR4C_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 3;
           Short=CCR4 homolog 3
 gi|332642585|gb|AEE76106.1| carbon catabolite repressor protein 4-like 3 [Arabidopsis thaliana]
          Length = 448

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 24/222 (10%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN----SVKRTTSDYTLLRQYAKNLDADIV 69
               +   ++  +VS+NI             +       +      L+ +    L+ DI+
Sbjct: 99  TTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELIRLNPDII 158

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            +QE+  Y  +  +  K  +          ++ +R  +N    A+  +     VL++   
Sbjct: 159 SMQEVDKYFDLFSMMEKAGYA--------GSYKRRTGDNVDGCAMFWKADRFGVLERENI 210

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                           +EL      +KI + +IH+                  +   Q +
Sbjct: 211 EFSQFGMRDNVAQLAVLELRKSNKSRKILLGNIHVLYNPNQGD----------VKLGQVR 260

Query: 190 WL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            L  K  +  KK   +P V+ GDFN        N      ++
Sbjct: 261 SLCSKAHLLSKKWGDIPIVLCGDFNSTPKSPLYNFLASSELN 302



 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 6/58 (10%), Positives = 19/58 (32%)

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            + + +    +DY           + ++    +  +       +  SDH  +  ++ F
Sbjct: 387 TSYHSKFLGTVDYLWYSDGLLPARVLDTLPIDVLCKTKGLPCQELGSDHLALVSEFVF 444


>gi|67900622|ref|XP_680567.1| hypothetical protein AN7298.2 [Aspergillus nidulans FGSC A4]
 gi|40742159|gb|EAA61349.1| hypothetical protein AN7298.2 [Aspergillus nidulans FGSC A4]
 gi|259483352|tpe|CBF78671.1| TPA: endonuclease/exonuclease/phosphatase family protein
           (AFU_orthologue; AFUA_2G16830) [Aspergillus nidulans
           FGSC A4]
          Length = 300

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 66/262 (25%), Gaps = 21/262 (8%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ NI   +        +   +R       LR   +N DA  + LQE+     +  
Sbjct: 9   PLRILTHNIRY-ATTSPFRGERFWEERAPRLLNELRYNTRNQDA-FICLQEVLDNQLIDI 66

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNN----------DIHTAIAVRKKNVRVLQQSYPLLG 132
           +   N+     S     +     +              ++ I  R     +       L 
Sbjct: 67  LSGLNSNDHVDSGAAAESSDHTWAYIGVGRDDGYKAGEYSPILYRPSVWELRHWETVWLS 126

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWV--LDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                       A   +V I      V    +   +    D    +   +  ++  +   
Sbjct: 127 ETPDVPSKSWDAASIRIVTIGLFTHHVSRHTVLAMNTHLDDQGSRSRFEAAHIILHKIDE 186

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRCNA 247
            ++       S     +AGD N +                +D    +       +     
Sbjct: 187 YRNGRFGNIISG--IFLAGDLNSEDTQEAYAVLTALESPMVDSATLVDTADYYGNQTTWT 244

Query: 248 NKNLRN--KIPIDYFVMDQNAY 267
                      IDY ++     
Sbjct: 245 GFGYEGEDPKRIDYILLGPAVR 266


>gi|322700279|gb|EFY92035.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           [Metarhizium acridum CQMa 102]
          Length = 706

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/357 (12%), Positives = 97/357 (27%), Gaps = 76/357 (21%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +++++ SWN+  +  +  +       +        + +    +  DAD + LQE+ +   
Sbjct: 323 ERIKVFSWNVLCDKYATPQTYGYTPTNALNWEYRKSCILDELRLRDADFLSLQEVSTDAF 382

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGA-- 133
              + P+     +       + +K  S  D  T    A+  ++    +L +      +  
Sbjct: 383 KEDLSPELAQMDYKGVHWPKSRAKTMSEKDAQTVDGCAVFYKQSKYILLDKQLIEFASIA 442

Query: 134 ---------KDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDS-------- 172
                     D F+R   +  + ++      + G +I ++++HL     L          
Sbjct: 443 INRPDMKNQHDVFNRVMPKDNIAVICFFESRLTGARIILVNVHLTWDSALADVKVIQTGI 502

Query: 173 ---------LENTYSPSCSLLSQQAQWLKDWITQKKE-------------SLVPFVIAGD 210
                     +    P+          L D     +              + +P ++ GD
Sbjct: 503 LMEHVTKLAEKYARWPAVKDKKMITVPLPDDAEAPEPQAEPGPSQEYRTNTDIPLLVCGD 562

Query: 211 FNRKINYLGN------------------------NDDFWKTIDPNDSLIRFPKEKDSRCN 246
           FN                                 D         D+     K  D    
Sbjct: 563 FNSTEGSSVYDLMSMGRVPPDHLELTSYQYGSFTRDGIEHPFSLRDAYAHTKKTADEMPF 622

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDY 302
            N        IDY     N  + +      +  Y             +DH  I  D+
Sbjct: 623 TNYTPGFADVIDYIWYSTNTLEVVELLGPPDAEYLKRMPAFPNWHFPADHIQIMADF 679


>gi|295675193|ref|YP_003603717.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
 gi|295435036|gb|ADG14206.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
          Length = 265

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 76/292 (26%), Gaps = 65/292 (22%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA------- 79
           VSWN++      G   W             ++++ ++  AD  FLQE  +          
Sbjct: 20  VSWNLHKGRTPLGFQAW-----------QAMQRWVQSTHADAYFLQEAMARRMPSPVLAS 68

Query: 80  ---------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                    ++ V+      I  + E  +               A+   +   L   + +
Sbjct: 69  SFGAPMGDPLSDVWHCQATEIARALELEVALGPNVFKPSWRHGNAILSPHPLDLGGRWDI 128

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   R   R  +       G+ + +L  HL                     +Q  W
Sbjct: 129 SA-----HRFEKRGLLVARATFGGRLVTLLCAHLALTRP-------------ARLRQMNW 170

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +  WI ++     P V+AGDFN   N           +     L                
Sbjct: 171 IAHWIAKEAPDG-PLVLAGDFNDWRNDSVP-------LFREHGLQEVATLLGEPARTFPA 222

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +D   +        IQ +                 LSDH P     
Sbjct: 223 FSPALSLDKMFVRGMQPVEWIQPT------------QETAWLSDHLPYMAKL 262


>gi|307728210|ref|YP_003905434.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
 gi|307582745|gb|ADN56143.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
          Length = 265

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 80/301 (26%), Gaps = 65/301 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           ++  +    VSWN++      G   W             ++++ ++  AD  FLQE  + 
Sbjct: 11  SAAPKDFVAVSWNLHKGRTPLGFQAW-----------QAMQRWVQSTHADAYFLQEAMAR 59

Query: 78  ----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                           + ++ V+      I  + +  I               A+   + 
Sbjct: 60  RMPSPVLASSFGAPVTDPLSDVWHCQATEIARALQLEIALGPNVFKPSWRHGNAILSPHP 119

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             L   + +        R   R  +       G  + +L  HL                 
Sbjct: 120 LDLGGRWDISA-----HRFEKRGLLVARATFGGHSVTLLCAHLALTRS------------ 162

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
               +Q  W+  WI+++     P V+AGDFN   N           +     L       
Sbjct: 163 -ARLRQMNWIAHWISKEAPDG-PLVLAGDFNDWRNDSVP-------LFGEHGLHEVATLL 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                        + +D   +        IQ +                 LSDH P    
Sbjct: 214 GESGRTFPAFSPALALDKMFVRGMKPIEWIQPT------------QETAWLSDHLPYMAR 261

Query: 302 Y 302
            
Sbjct: 262 L 262


>gi|260834073|ref|XP_002612036.1| hypothetical protein BRAFLDRAFT_127247 [Branchiostoma floridae]
 gi|229297409|gb|EEN68045.1| hypothetical protein BRAFLDRAFT_127247 [Branchiostoma floridae]
          Length = 333

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 57/212 (26%), Gaps = 25/212 (11%)

Query: 108 NDIHTAIAVRKKNVRVLQQSY-------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
               + + V  K+       +       P  G K      G +      ++ +GK+I   
Sbjct: 14  GYTGSGVCVLSKHPITAVCQHQYTLNGHPQDGLKLELDWFGGKLLGLCRIQYSGKEINFY 73

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----- 215
             H  +        + Y    +    QA  +  +I     +    ++ GD N +      
Sbjct: 74  ATHTHAAHKSPPELSPYK---AHRVSQAFEISQFIRSTGGTADLNILTGDLNFRPGELGL 130

Query: 216 ----NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
               +  G  D +      N               A     N+  IDY +   +    + 
Sbjct: 131 KIIQSDTGMEDAWLTAEHKNADDSGVTGNHPENNFAT---GNQQRIDYILYKGSTECKVK 187

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  ++            SDH  +   ++
Sbjct: 188 CVHCETTMHKVPGKP---FNYSDHEAVLAHFE 216


>gi|87307062|ref|ZP_01089208.1| deoxyribonuclease gamma (precursor) [Blastopirellula marina DSM
           3645]
 gi|87290435|gb|EAQ82323.1| deoxyribonuclease gamma (precursor) [Blastopirellula marina DSM
           3645]
          Length = 328

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/286 (9%), Positives = 69/286 (24%), Gaps = 39/286 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNA 79
            K+R+ S+NI              S         +L +  +    D+V +QE+ S   + 
Sbjct: 60  DKIRIASFNIQVFG---------QSKMNKPEVMQVLTEIVRKF--DVVAIQELRSSEQDV 108

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + +               +     R S+ + +  +  + +        + +    D    
Sbjct: 109 IPRFLQMINSTGRNYDSIVGPRLGRSSSKEQYVFLYDKNRIAVEPDSVFTINDPSDLLH- 167

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQ 197
              R  +       G     +             + T              L +   + +
Sbjct: 168 ---REPLVASFHAIGADRSRVPFRFTLINIHTDPDETDEE--------LDALGEVYQLVR 216

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                   ++ GD N                           E  +    +         
Sbjct: 217 YSGPEDDVILLGDLNVS------YKKLGALGKVPGITWTVSDEATNTLRKSSYDNL---- 266

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +  +  +F       +        + +   +SDH P+  ++ 
Sbjct: 267 --VFIAADTREFTGVAEVYDTEKEFRLTRDQAMDVSDHLPVWGEFS 310


>gi|34809536|gb|AAQ82689.1| Isc1p [Candida glabrata]
          Length = 436

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 88/333 (26%), Gaps = 70/333 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR----QYAKNL---------- 64
           S  Q+++ +++N   L       + K+   R  +    L        K+L          
Sbjct: 4   SEPQRIKFLTFNTWGL-----KYVSKHRRARLRALAEKLAGHQNSNIKSLPNSEDLYADD 58

Query: 65  ---DADIVFLQEMGSYNAVAKVFPK-----NTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
              D DIV LQE+        +  +       +  FY         +      ++     
Sbjct: 59  DFEDYDIVALQEIWCKEDWDYIVEQCGKIFPYYRWFYLEYCQALDWQYFQKFRLNQRFLY 118

Query: 117 RKKN---VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           R         + +    +G   + +   NR       E     I +++ H+ +   L   
Sbjct: 119 RYPINGRPSAIHRGDWYVGKSIAITTLRNR-------ENPTTPIVIMNSHMHAPYSLTG- 170

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------- 223
               +      S QA          +E+    VI GD N +   L +N            
Sbjct: 171 ---DAAYSCHRSCQAWDFAKLAKIYREAGYAVVIVGDLNSRPGSLPHNILTKEAGLIDSW 227

Query: 224 -------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
                            +D             +   A +       +DY ++D      +
Sbjct: 228 EQLHGKQDLEKIRTMNAMDQLVYACTTCDSTLNTWRATRRPDEACRLDYALVDPRRLTTI 287

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        ++       SDH   S   +
Sbjct: 288 KTG------IKFTELIDGVGSFSDHFAYSCTLE 314


>gi|224049123|ref|XP_002195833.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like
           [Taeniopygia guttata]
          Length = 561

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/349 (9%), Positives = 82/349 (23%), Gaps = 73/349 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 188 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 247

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 248 YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFTLVQKHTVEFNQV 307

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI----------------WVLDIHLKSF 167
           +       ++        +   V +++E++ +                   +L +     
Sbjct: 308 AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASEYDCGMKSLHVDKQLLIVANAHM 367

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY---- 217
            +     +       +   + + + +  + +        + +P V+  D N   +     
Sbjct: 368 HWDPEYSDVKLIQTMMFVSELKNILEKASSRPSSPTADPNSIPLVLCADLNSLPDSGVVE 427

Query: 218 ---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC------------NANKN 250
                              ++       N                            N  
Sbjct: 428 YLSNGIVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYENNLMPYTNYT 487

Query: 251 LRNKIPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              K  IDY        N    L       ++ N           SDH 
Sbjct: 488 FDFKGVIDYIFYSNTHMNVLGVLGPLDPQWLVDNNITGCPHPHIPSDHF 536


>gi|223985092|ref|ZP_03635188.1| hypothetical protein HOLDEFILI_02493 [Holdemania filiformis DSM
           12042]
 gi|223962914|gb|EEF67330.1| hypothetical protein HOLDEFILI_02493 [Holdemania filiformis DSM
           12042]
          Length = 662

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 76/291 (26%), Gaps = 53/291 (18%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             P  +S    +R+ +WNI                 +   D   +         +I+  Q
Sbjct: 47  ATPTPSSDVTTMRVATWNI---------------DSKAHPDIKEMSNIIHERGIEIMGFQ 91

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+   N                    ++ +K     D +  +            S P+  
Sbjct: 92  EIDILNTRND--YDMAQDFVNDNYPYVHFAKGRDFADGYFGVGTTSSLEFQEISSVPIES 149

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                ++   R    ++VE  GK+I     H                +  L  +Q   + 
Sbjct: 150 TGSKATKTLER----VVVEKEGKQIAFYVTHTSW------------ENNDLRRRQFTEII 193

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + +    + +   ++  DFN   +    +         N     +        N   +  
Sbjct: 194 ERLA--ADPIPYKILVADFNADQSLYEYDIFKDNYNVSNGKDGVWFDS----FNGTDDSM 247

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +D  +  +N              Y+ D          DH  +  D +
Sbjct: 248 KVMTVDNIITTKNI------NITHVETYHSDMA--------DHDLMFADIE 284


>gi|13476402|ref|NP_107972.1| hypothetical protein mll7713 [Mesorhizobium loti MAFF303099]
 gi|14027163|dbj|BAB54117.1| mll7713 [Mesorhizobium loti MAFF303099]
          Length = 358

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 58/251 (23%), Gaps = 53/251 (21%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             +       + D++ L E+         F  + +           +       +    +
Sbjct: 132 KKVLSLIGRTNPDVITLDEVSQMWTTELGFIASAY----------PYRILCPYPNGMFGV 181

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSL 173
           A+  +   V   +           R   R A+    ++  G ++ V  IHL         
Sbjct: 182 ALLSRRPFVAGTA----------PRCEPRGAMATATIDFGGIEVDVAAIHLSWPWP---- 227

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                        Q   L   +          ++AGD N               +     
Sbjct: 228 --------KEQYWQIGELAQTLAGL---GQTAIMAGDCNAVPWSAAVRRV--AALGGLTL 274

Query: 234 LIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +         R   +   R    PID                           +      
Sbjct: 275 MPSAGPTWIHRTLPDVLRRYAGLPIDQVFSKGGL--------------TILSSQRLEDTG 320

Query: 293 SDHCPISIDYD 303
           SDH P+ +++ 
Sbjct: 321 SDHLPVLVEFT 331


>gi|260820543|ref|XP_002605594.1| hypothetical protein BRAFLDRAFT_127308 [Branchiostoma floridae]
 gi|229290928|gb|EEN61604.1| hypothetical protein BRAFLDRAFT_127308 [Branchiostoma floridae]
          Length = 287

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 83/292 (28%), Gaps = 33/292 (11%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            K+ LA +   +   +     +++ ++N+ T          K S          + +   
Sbjct: 1   MKFGLAFLALGIFALSGACSALKIGAFNVQTFGRS------KMSKPEVVDILLQIAE--- 51

Query: 63  NLDADIVFLQEMGSYNAVAK---VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               DI+ +QE+      A    +   N       +  L     R S      AI  R  
Sbjct: 52  --RYDILLIQEIRDNTFTAIYSFLDQLNARSGNDYSMLLSERLGRSSYYMEQYAILYRND 109

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                   Y      D F     R    +        +    +        D++      
Sbjct: 110 RALTPVGDYHYSDPGDIFH----REPYVIRFLSGTTSVQDFVLVPLHADPEDAVVENNQ- 164

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              L +     L  W           +I GD N   +Y+G++D     I  ++       
Sbjct: 165 ---LYNVYQDALDRW------GDEDILIFGDLNADCSYVGSSDWPGIRIWTDNRFQWLIG 215

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
            +      + +       D  V+  +  +  +  S+S   Y  +   ++ +R
Sbjct: 216 NEADTTVKSTHCAY----DRLVVAGSQLQASV-RSYSVFDYKSEYGLTQSER 262


>gi|145348823|ref|XP_001418843.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579073|gb|ABO97136.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 325

 Score = 62.6 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 79/296 (26%), Gaps = 48/296 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +RL+++N+    +                    L +  +  DA +V LQE+ +  A+ 
Sbjct: 42  GDLRLLTYNV-WFGDVAQA-----------ERLEALGKVIETCDAHVVCLQEV-TPQALF 88

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  +  W  +    +             + ++ + K+ VR           ++S     
Sbjct: 89  VLRAQPWWDAYVVGPKPP--------LQEYFSMMLFKRVVRSEVLKRDQYAFRNSQMGRY 140

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 +    +     +   HL+S+            S    + Q      W+ Q + +
Sbjct: 141 LDVVSHMRCPSSRATFALGTSHLESYIS------ASRTSARERAVQMSECFSWLNQHENA 194

Query: 202 LVPFVIAGDFNRKINY---LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
               +  GD N           +      ++       F  +          L+    +D
Sbjct: 195 ----IFMGDTNWDDKDGAVPLPDGWRDAWLEARPGDPGFTYDARKNAMLRGYLQK--RLD 248

Query: 259 YFVMDQNAYKFLIQESF------------SEILYNEDDIKSRGKRLSDHCPISIDY 302
              +    +     E              +     +  I       SDH  + +  
Sbjct: 249 RAFVKLKHFDVKRVEMVGTDPIPGVTYHKTVSNRGKAQILELPVVPSDHFGLLLTL 304


>gi|332642586|gb|AEE76107.1| carbon catabolite repressor protein 4-like 3 [Arabidopsis thaliana]
          Length = 449

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 24/222 (10%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN----SVKRTTSDYTLLRQYAKNLDADIV 69
               +   ++  +VS+NI             +       +      L+ +    L+ DI+
Sbjct: 99  TTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELIRLNPDII 158

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            +QE+  Y  +  +  K  +          ++ +R  +N    A+  +     VL++   
Sbjct: 159 SMQEVDKYFDLFSMMEKAGYA--------GSYKRRTGDNVDGCAMFWKADRFGVLERENI 210

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                           +EL      +KI + +IH+                  +   Q +
Sbjct: 211 EFSQFGMRDNVAQLAVLELRKSNKSRKILLGNIHVLYNPNQGD----------VKLGQVR 260

Query: 190 WL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            L  K  +  KK   +P V+ GDFN        N      ++
Sbjct: 261 SLCSKAHLLSKKWGDIPIVLCGDFNSTPKSPLYNFLASSELN 302



 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 6/58 (10%), Positives = 19/58 (32%)

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            + + +    +DY           + ++    +  +       +  SDH  +  ++ F
Sbjct: 388 TSYHSKFLGTVDYLWYSDGLLPARVLDTLPIDVLCKTKGLPCQELGSDHLALVSEFVF 445


>gi|291533503|emb|CBL06616.1| exodeoxyribonuclease III (xth) [Megamonas hypermegale ART12/1]
          Length = 151

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 36/152 (23%)

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGN 220
                     Q     ++++ +      P V+ GD N                       
Sbjct: 11  RELERLDYRMQWEDAFRNYLVE-LNKQKPVVMCGDLNVAHKEIDLKNPKTNRRSAGFTDE 69

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLI 271
                  +     +  F      + +                   IDYF++ ++    + 
Sbjct: 70  ERSKMTELLQAGFVDTFRYLYPDKTSIYSWWSYMRKARENNAGWRIDYFIVSKDIETNIK 129

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +       +            SDHCP+S++ D
Sbjct: 130 EAGIHNEFF-----------GSDHCPVSLELD 150


>gi|11994114|dbj|BAB01117.1| unnamed protein product [Arabidopsis thaliana]
          Length = 445

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 24/222 (10%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKN----SVKRTTSDYTLLRQYAKNLDADIV 69
               +   ++  +VS+NI             +       +      L+ +    L+ DI+
Sbjct: 99  TTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELIRLNPDII 158

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            +QE+  Y  +  +  K  +          ++ +R  +N    A+  +     VL++   
Sbjct: 159 SMQEVDKYFDLFSMMEKAGYA--------GSYKRRTGDNVDGCAMFWKADRFGVLERENI 210

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                           +EL      +KI + +IH+                  +   Q +
Sbjct: 211 EFSQFGMRDNVAQLAVLELRKSNKSRKILLGNIHVLYNPNQGD----------VKLGQVR 260

Query: 190 WL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            L  K  +  KK   +P V+ GDFN        N      ++
Sbjct: 261 SLCSKAHLLSKKWGDIPIVLCGDFNSTPKSPLYNFLASSELN 302



 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 6/58 (10%), Positives = 19/58 (32%)

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            + + +    +DY           + ++    +  +       +  SDH  +  ++ F
Sbjct: 384 TSYHSKFLGTVDYLWYSDGLLPARVLDTLPIDVLCKTKGLPCQELGSDHLALVSEFVF 441


>gi|312218131|emb|CBX98077.1| similar to glucose-repressible alcohol dehydrogenase
           transcriptional effector [Leptosphaeria maculans]
          Length = 760

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 45/358 (12%), Positives = 96/358 (26%), Gaps = 74/358 (20%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG- 75
           S  + V  +S+NI  +    Q       ++     S   L+    +  +ADIV LQE+  
Sbjct: 377 SQQETVTALSYNILCDKYCTQSQYGYTPSTALSWESRRELILAELRERNADIVCLQEIDQ 436

Query: 76  ---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL- 131
              +      +   +   +F+   R    ++R++      AI  +     +L +      
Sbjct: 437 DSFNEFFREALAHNDYKGVFWPKSRARTMAEREAKLVDGCAIFFKNSKYILLDKQLIDFA 496

Query: 132 ----------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTY 177
                     G  D F+R   R  + ++      + G +  V ++H+        ++   
Sbjct: 497 NTAINRPDMKGEHDIFNRVMPRDDIGVVAFLENRVTGSRFIVGNVHVYWNPAFTDVKLVQ 556

Query: 178 ------------SPSCSLLSQQAQWLKDWITQKKESLV--------------------PF 205
                       +        + + +  +     E                       P 
Sbjct: 557 VAILMEGISKLANKWAKFPPCKDKVVYRFTNGDNEEGKELDPSQEPGPSMEYSDGSQIPV 616

Query: 206 VIAGDFNRKINYLGNN-------DDFWKTIDPNDSLIRFPKEKDSRC------------- 245
           ++ GDFN   +    +        +    +                              
Sbjct: 617 ILCGDFNSLPDSGVYDLITQGTISNTHSDLGSRKYGNFTRDGISHPFSLKSSYAAIGELA 676

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDY 302
             N   + K  +DY     N  + +      +  Y +           SDH  +   Y
Sbjct: 677 FTNYVPQFKGVLDYIWYSTNTLQVVGLLGDIDKGYLQRVPGFPNYHFPSDHVALYAQY 734


>gi|154332531|ref|XP_001562082.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134059530|emb|CAM37109.1| inositol phosphosphingolipid phospholipase C-Like [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 657

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 85/327 (25%), Gaps = 69/327 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A+    +R++S+N+  +         K   +R     T +  Y      D++ LQE 
Sbjct: 5   SALAAGELPIRVLSFNLWGIFNS------KGREERMKVFATKIEHY------DVILLQEQ 52

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--QSYPLLG 132
            S    A +          S  +     +R  ++   +  AV  +   +      +PL G
Sbjct: 53  FSAEDFALIM-----QHASSEVQRTYKFRRFPSSFYGSGCAVISRYPIIQAFFHVFPLQG 107

Query: 133 AKDSFSR---------AGNRRAVELLVEING----KKIWVLDIHLKSFCFLDSLENTYSP 179
             +             A  R  V + +E       + + +   HL +     S   +   
Sbjct: 108 YPEMVFHGDFFANKGVAMVRVMVPVTMEGGKAISEQVVTLYTTHLIAVYQKVSQLPSRKQ 167

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------------- 224
             +      QA  L ++I          ++ GDFN     L                   
Sbjct: 168 EGNLPFRISQAVSLANFIASTSRPTDHIIVGGDFNCSQRSLEVQMMLILLKRHGYNMRSV 227

Query: 225 ----WKTIDPNDSLIRFPKEKDSRCNANKNL------------------RNKIPIDYFVM 262
                  +D         +E + +     +                        ID+   
Sbjct: 228 LPSPRALVDAATPEQAREREHEEQLFTYSHRNAFNSMDTSYFKLLNLESDLPAQIDHVFF 287

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRG 289
              A+         ++  +        
Sbjct: 288 STPAFALRNFADCPDVAADYPCALRSA 314


>gi|126734552|ref|ZP_01750298.1| hypothetical protein RCCS2_11784 [Roseobacter sp. CCS2]
 gi|126715107|gb|EBA11972.1| hypothetical protein RCCS2_11784 [Roseobacter sp. CCS2]
          Length = 260

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 78/284 (27%), Gaps = 47/284 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q+   +SWNI+     +G                 LR        D + LQE        
Sbjct: 19  QEFTCLSWNIHRCRGNDGRIDP-------ARTLATLRDDMPVGAIDALILQEADEEVPPH 71

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFSR 139
                       +  R ++       +D        +      +  +S  LL        
Sbjct: 72  SGLLDIAAVEAATGLRYLHTDPAHRWSDGSHGFLGTIMFTRPEIAVESITLLDLPGRCH- 130

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R AV   +  NG++  ++ +HL                 +L   Q + +  ++   +
Sbjct: 131 ---RGAVIADLTRNGQEFRLVGMHLSLMQ-------------TLRWAQLRTICQFM--FR 172

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +   P ++ GD N            W  +  +   +       ++       R  +P+D 
Sbjct: 173 KPRQPAILMGDLNEWRP--------WGGLALSKRFLGAELRGPAKA-TFPINRPMLPLDR 223

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +    A           +   +       +  SDH P+     
Sbjct: 224 VLTTAPA----------HVSATQVLDGPGIRMTSDHRPLLAHIS 257


>gi|302898293|ref|XP_003047818.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256728749|gb|EEU42105.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 700

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 44/355 (12%), Positives = 94/355 (26%), Gaps = 74/355 (20%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +K+++ SWNI  +  +  +                  + +  +  DAD + LQE+ +   
Sbjct: 319 EKIKVFSWNILCDKYATPQTYGYTPTGALNWEYRKDCILEELRIRDADFLALQEVSTDAF 378

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLGA-- 133
              + P      +       + +K  S  D       A+  ++    +L +         
Sbjct: 379 KEDLSPDLAQMDYKGVHWPKSRAKTMSEKDAQSVDGCAVFYKQSKFILLDKQLIEFATIA 438

Query: 134 ---------KDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCF-LDSLENTYSP 179
                     D F+R   +  + ++      + G +I ++++HL       D        
Sbjct: 439 INRPDMKNQHDVFNRVMPKDNIAVICFFESRLTGARIILVNVHLTWDSALADVKVIQTGI 498

Query: 180 SCSLLSQQAQWLKDWI---------------------------TQKKESLVPFVIAGDFN 212
               +++ A+    W                              +  + +P ++ GDFN
Sbjct: 499 LMEHVTKLAEKYARWPAVKDKKMIVLPTDDEVPTPQIEPGPSQEYRVNTEIPLLVCGDFN 558

Query: 213 RKINYLGN------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              +                             D         D+        D     N
Sbjct: 559 STEDSSVYELMSMGRVPPDHLELSNFQYGSFTRDGIEHPFSLRDAYAHTKHTADEMPFTN 618

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDY 302
                   IDY     N  + +      +  Y             +DH  I  ++
Sbjct: 619 YTPGFADVIDYIWYSTNTLEVVDLLGPPDPEYLKRVPAFPNWHFPADHIQIMSEF 673


>gi|77407890|ref|ZP_00784642.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae COH1]
 gi|77173535|gb|EAO76652.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae COH1]
          Length = 271

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 73/279 (26%), Gaps = 54/279 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST---------------- 95
                L ++      DI+ LQE+    +         +     T                
Sbjct: 19  KKLFDLAEHIFREKYDIICLQEVNQSISSPLATSSPNYHPIEGTPALHQDNFALQLVHYL 78

Query: 96  ------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+       L+    L+ A D  +    RRA+   
Sbjct: 79  NLQGLHYHWTWAYNHIGYSKYHEGVAILSLKP--LKPDDILVSAVDDETDYHTRRALVAE 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             +N K + V+ +HL  F                    A+  K   T   E   P ++ G
Sbjct: 137 TTLNDKVVTVVSLHLSWFEKG----------------FAEEWKRLETTLLEVETPLLLMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        +   DS                 +  +  +  + +D+    +
Sbjct: 181 DFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSE 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +      Q  F                +SDH  + I  +
Sbjct: 241 DLSISSSQVVFEGGEAPV---------VSDHYGLEITLN 270


>gi|225465549|ref|XP_002274515.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 944

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 76/288 (26%), Gaps = 67/288 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++SWN+  +++                   +++   ++   D+  LQE        ++
Sbjct: 3   LRILSWNVRGVND--------------RLKRKIIKSVIRSQKVDLFCLQETKVQVMSDEM 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   +          K  +       + +      +                   +
Sbjct: 49  VRSLGSGRYIDW-------KVLNAKGTAGGVIICWDKRSLE-----------ILGVEEGQ 90

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            ++       G   IWV       F                L ++   ++          
Sbjct: 91  FSISCRFRNEGDGAIWVFTGVYGPFS---------REDREGLWEELGAIRGLWE------ 135

Query: 203 VPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            P+ + GDFN  +     N           F + ID    +    +      +   N + 
Sbjct: 136 EPWCLGGDFNITLYIDDRNRTGRITSAMRRFAQIIDELGLVDIPLQGGSFTWSGGLNNQT 195

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +  +D F+                  ++    +   +  SDH PI ++
Sbjct: 196 RARLDRFLATP----------CWLDQFSRVLNRRLPRPTSDHYPILLE 233


>gi|198424184|ref|XP_002124912.1| PREDICTED: similar to Deoxyribonuclease-1 precursor
           (Deoxyribonuclease I) (DNase I) (Dornase alfa) [Ciona
           intestinalis]
          Length = 271

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 87/302 (28%), Gaps = 42/302 (13%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            K VL L F L    ++ A  + + ++N+              S          L +  +
Sbjct: 1   MKCVLLLCFLL---GSASATPLLIGAFNVQIFG---------QSKMDKPDVVATLVKIVQ 48

Query: 63  NLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               D++ +QE+      A+ ++  +           +++     +++        R   
Sbjct: 49  RY--DVIMIQEIRDSAGTALPELVTEVNGVSSVPYSYVVSPRTGRTSSKEQYGYIYRADK 106

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYS 178
           V V+ +           S    R    +      +GK+     I + +            
Sbjct: 107 VTVMSE-----YQYPDNSDVFEREPYSVKFGRSSSGKQQTFSYISIHAKPDDA------- 154

Query: 179 PSCSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                   +   L D      +      +IAGDFN   +Y+ ++      +  +      
Sbjct: 155 ------VAEIDALDDVYDVVAKQYGEDALIAGDFNADCSYVCSSCWQTIDMWTDPRFTWL 208

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                    ++ +       D  V+  +   +     S        +      K +SDH 
Sbjct: 209 IGSDVDTTVSSTDCAY----DRIVVAGKAMTENSGMGSVFRFDLAYNLSYEETKDVSDHY 264

Query: 297 PI 298
           P+
Sbjct: 265 PV 266


>gi|121699269|ref|XP_001267965.1| sphingomyelinase family protein, putative [Aspergillus clavatus
           NRRL 1]
 gi|119396107|gb|EAW06539.1| sphingomyelinase family protein, putative [Aspergillus clavatus
           NRRL 1]
          Length = 482

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/340 (10%), Positives = 74/340 (21%), Gaps = 76/340 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+++ N   L       + K   +R +     L     +    IV LQE  +      
Sbjct: 17  QIRILTLNCWGL-----KYISKFRHERMSEIGRQLA--IADPPPQIVGLQECWTQQDYES 69

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSF 137
           +           T  ++ + K          +A+  K        +         A    
Sbjct: 70  IRQ--------QTRDILPYGKFYFGGIFGAGLAILSKWPIEESSMFAYPLNGRPTAFFRG 121

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                +      +        V ++              +       + QA  +   +  
Sbjct: 122 DWFVGKGVACARIRFGPAAQDVAEVFCTHLHAPYER-EPHDSYLCHRTAQAWEIAKLMRG 180

Query: 198 KKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSL--------------- 234
             E     +  GDFN   +   +          D W+ + P+ S+               
Sbjct: 181 AAERGHLVIGLGDFNMIPSSFAHRLIHAHAPVRDVWQVLHPDSSVGATIDPPEQQRNKPM 240

Query: 235 ---------IRFPKEKDSRCNANKNLR-------------------NKIPIDYFVMDQNA 266
                         +                                   +DY  +    
Sbjct: 241 PSAAFNLSENGATCDGKFNTWRWSKEDRKRLEKGHDVVVDPDAPCPYGKRLDYIFVGDGG 300

Query: 267 YKFLIQESFS----EILYNEDDIKSRGKRLSDHCPISIDY 302
           +      +        +       +    LSDH  +    
Sbjct: 301 FPPDYPAARWSVESVAIGMTQRHPTLRCSLSDHFAVEAVI 340


>gi|320155102|ref|YP_004187481.1| extracellular deoxyribonuclease Xds [Vibrio vulnificus MO6-24/O]
 gi|319930414|gb|ADV85278.1| extracellular deoxyribonuclease Xds [Vibrio vulnificus MO6-24/O]
          Length = 1043

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 45/386 (11%), Positives = 88/386 (22%), Gaps = 112/386 (29%)

Query: 23  KVRLVSWNINTLSEQEGVSLWK--------NSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +++ + N+                      S +        + +    LDADIV L E+
Sbjct: 505 TIKVATQNVLNYFNSPYGGHDNQFGDNRGAESQQEFERQQAKIVEAIYGLDADIVGLMEV 564

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----------------------- 111
            +         +       +     N+  R +   IH                       
Sbjct: 565 ENNGFGDFSAIRELLEAINAKYYKENYKDRFARESIHNRYVFVGFDKNGDQVLDQFDTIG 624

Query: 112 -----TAIAVRKKNVRVLQQSYPLLGAKD--------------------SFSRAGNRRAV 146
                T I  R   V V+      +  +D                       +   R  V
Sbjct: 625 SDAITTGIIYRPSKVSVIAGKVIPMPWQDAPMIVDADGKPVVDGKGELAESGKNYQRNTV 684

Query: 147 ELLVEI--NGKKIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQ---AQWLKDWITQK 198
                +   GK++ V   HLKS    C+ D +        +  S +            + 
Sbjct: 685 AATFRVLNTGKQLTVSVNHLKSKGSTCWDDYVGTKAVDDDAQGSCENFRVASTYHLGQEM 744

Query: 199 KESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS--------------------- 233
            +     ++ GD N   +        ++   K +   D                      
Sbjct: 745 AKIGGDQIVLGDMNSYAHEDPMLVLTSNPTKKALKAADYIKVGNKWQFNGEQGPVITQTF 804

Query: 234 ----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR- 288
                + +         +         +D+ ++  +    L+      I   E  +    
Sbjct: 805 GFINAVDYKTPAGETSWSYSYNDEVGSLDHLLITSSLKSRLVDAVDWHINAPESTLFDYS 864

Query: 289 ------------------GKRLSDHC 296
                               R SDH 
Sbjct: 865 NKYKGGDSNEANPFYKADAFRSSDHD 890


>gi|77411870|ref|ZP_00788203.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae CJB111]
 gi|77162091|gb|EAO73069.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae CJB111]
          Length = 271

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 73/279 (26%), Gaps = 54/279 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST---------------- 95
                L ++      DI+ LQE+    +         +     T                
Sbjct: 19  KKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYL 78

Query: 96  ------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+       L+    L+ A D  +    RRA+   
Sbjct: 79  NLQGLHYHWTWAYNHIGYSKYHEGVAILSLKP--LKPDDILVSAVDDETDYHTRRALVAE 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             +N K + V+ +HL  F                    A+  K   T   E   P ++ G
Sbjct: 137 TTLNDKVVTVVSLHLSWFEKG----------------FAEEWKRLETTLLEVETPLLLMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        +   DS                 +  +  +  + +D+    +
Sbjct: 181 DFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSE 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +      Q  F                +SDH  + I  +
Sbjct: 241 DLSISSSQVVFEGGEAPV---------VSDHYGLEITLN 270


>gi|332992830|gb|AEF02885.1| putative extracellular nuclease [Alteromonas sp. SN2]
          Length = 855

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/358 (12%), Positives = 87/358 (24%), Gaps = 76/358 (21%)

Query: 22  QKVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVF 70
             + + ++N+        +  G   +     R   D          + +    L+AD+V 
Sbjct: 457 GNLSIATFNVLNYFNGEVDANGDVTFDFDANRGAEDETEFALQEARIVEAIVGLNADVVG 516

Query: 71  LQEMGSYNA--------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           L E+ +           +              +      S     + I   +  R   V 
Sbjct: 517 LMEIENDGFGDDSAIVSLVAAVNAELADTEQYSFISTADSTEIGTDAITVGLLYRASIVT 576

Query: 123 VL---QQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL------- 170
                Q     +   D  S A  R ++        +GK   V   H KS           
Sbjct: 577 PEGDAQVVDMPIQQIDEDSVAQMRPSLIQSFAHIESGKTFAVAVNHFKSKGSECGEDLAE 636

Query: 171 -DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------- 219
             S  +T   SC+ L   A          +      ++ GD N                 
Sbjct: 637 AVSETDTIQGSCNALRVSAAITLGEALSDESLPERILVLGDLNSYSAEDPVAVLTDYTAE 696

Query: 220 -------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQ 264
                         +D     +  N   +   +E D+   +      +    +D+ +  +
Sbjct: 697 TQGYTVMTAANTGMDDGASVEVTANYGYVNLAEEFDAEGYSYWFYGTEQVGSLDHVLASE 756

Query: 265 NAYKFLIQESFSEILYNEDDIKSRG-------------------KRLSDHCPISIDYD 303
                 +  +   I   E                           R SDH P    ++
Sbjct: 757 TMLADAVDGAHWSINSPEVYQFQYDQALSYYPDEDGYAFTDVGPFRSSDHDPFIATFN 814


>gi|257093472|ref|YP_003167113.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045996|gb|ACV35184.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 501

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 79/257 (30%), Gaps = 32/257 (12%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEM-----GSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
               + + +   +LD DIV LQE+                +       +   L+      
Sbjct: 255 DYKLSQIAKAIGDLDVDIVCLQEVAELWNEGRGDWQTNTARIINERLGTPYHLVTDWSHL 314

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
                   +A+  ++    + +   + A        +R+ V   VE+    + +L++   
Sbjct: 315 GFGRYREGVALLSRHPIR-KHAARYVSASHDPYSIHSRKVVMAQVEVP--SVGLLNVFSS 371

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKKESLVPFVIAGDFNRKINYLGN---- 220
              + D               Q + L+ W   +    +   ++ GDFN K    G     
Sbjct: 372 HLSWWDDGFPE----------QFENLRRWAGEEHTSQVTATMLGGDFNIKAGSNGYQLVV 421

Query: 221 --NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
             N+   + +            +      + +L +   IDY  + + +   +       +
Sbjct: 422 ASNEFDDQFLSARSPQTFHKIFEVRDLPWSHDLDDDHRIDYVFLRKGSALRVTSG--RVV 479

Query: 279 LYNEDDIKSRGKRLSDH 295
             ++D        +SDH
Sbjct: 480 FTDQDYG-----TVSDH 491


>gi|326471548|gb|EGD95557.1| DNA lyase [Trichophyton tonsurans CBS 112818]
          Length = 592

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 78/320 (24%), Gaps = 80/320 (25%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSK 103
             R    +  +    +   ADIV  QE  +   +    +   + W  ++S  ++   +S 
Sbjct: 10  PWRGNQTFGAMFDILE---ADIVVFQEAKIQRKDLQDDMVLVSGWDCYFSLPKQKKGYSG 66

Query: 104 RDSNNDIHTAIAVR-------------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LL 149
                      A+R              K       +   +G   S  +      V+ + 
Sbjct: 67  VVIYTRSSKCAAIRAEEGVTGALCPPSSKTPFRQLSASEQIGGYPSIEQMEELSEVDPIT 126

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVI 207
           V+  G+ + +      +F  +                      L+  +    +     ++
Sbjct: 127 VDSEGRCLIL---EFPAFVLIGVYCPADRDETRDDFRLGFFNLLEVRVRNLVKMGKRVIL 183

Query: 208 AGDFNR----------------------KINYLGNNDDFWKTIDPNDSL----------- 234
           AGD N                       +     +   F + + P  S            
Sbjct: 184 AGDLNTCAGAIDSAPALERIRKGTETEEEYLSYPSRRIFNRLVRPVGSTGDTHDTETPPV 243

Query: 235 --IRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                 +    R                     IDY +   N   + ++ +         
Sbjct: 244 LRDLCREFHPGRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQ------- 296

Query: 284 DIKSRGKRLSDHCPISIDYD 303
                G   SDHCP+     
Sbjct: 297 ----EGLIGSDHCPVYASIS 312


>gi|158340881|ref|YP_001522049.1| hypothetical protein AM1_D0244 [Acaryochloris marina MBIC11017]
 gi|158311122|gb|ABW32735.1| endonuclease/exonuclease/phosphatase [Acaryochloris marina
           MBIC11017]
          Length = 258

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 50/280 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++WNI             N       D++ L ++      D++FLQE    + + K
Sbjct: 26  SLRILNWNI----------AKNNHRHEWLQDFSKLVEW---YPPDLIFLQEFRFDSTLKK 72

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F  +     ++      +       D H  +    K      +S+     +   +    
Sbjct: 73  PFYCDAMSWQFAPNMSNPY------TDQHFGVLTASKVKHQSGKSFLTQACEPFLNTPKV 126

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
               E  +  + + +  ++IH  +F            S      Q Q L+  +T      
Sbjct: 127 SLITEYSLAGSKQTLLAVNIHGINFV-----------STRKFQSQLQQLEAQLTIHPG-- 173

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P +++GDFN    +        +T+     L +         N  +       +D+   
Sbjct: 174 -PIILSGDFN---TWNEYRMKVLQTMVRRLDLRQVTFSSAHYKNLKQFFDYP--LDHIFY 227

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               +   +         +           SDH P+ ++ 
Sbjct: 228 RG--FTQCLGSEIVLGELSS----------SDHSPLVVEL 255


>gi|66734174|gb|AAY53484.1| endonuclease reverse transcriptase [Bos taurus]
          Length = 1272

 Score = 62.6 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 79/293 (26%), Gaps = 73/293 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ N+N L+                     L ++ +  D  I  LQE          
Sbjct: 7   LSVITLNVNGLNAPT--------------KRQRLAEWIQKQDPYICCLQETHLKTGDTYR 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +   R    +              + K V+  ++ +               
Sbjct: 53  LKVKGWKKIFHANRDQKKAGVAILISDKIDF--KTKAVKRDKEGHY-------------- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  ++I +++I+  +                      + +   +  +  +  
Sbjct: 97  --IMIKGSIQEEEITIINIYAPNTGAPQ---------------YVRQMLTSMKGEINNNT 139

Query: 204 PFVIAGDFNRKIN------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             +I GDFN  +                  +D    +D  D    F  +  +    +   
Sbjct: 140 --IIVGDFNTPLTPMDRSTKQKINKETQTLNDTIDQLDLIDIYRSFHPKTMNFTFFSSAH 197

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                ID+ +  + +     +      ++            SDH  + +D ++
Sbjct: 198 GTFSRIDHILGHKASLGKFKKIEIIPSIF------------SDHNAVRLDLNY 238


>gi|326481851|gb|EGE05861.1| DNA lyase [Trichophyton equinum CBS 127.97]
          Length = 592

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 78/320 (24%), Gaps = 80/320 (25%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSK 103
             R    +  +    +   ADIV  QE  +   +    +   + W  ++S  ++   +S 
Sbjct: 10  PWRGNRTFGAMFDILE---ADIVVFQEAKIQRKDLQDDMVLVSGWDCYFSLPKQKKGYSG 66

Query: 104 RDSNNDIHTAIAVR-------------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LL 149
                      A+R              K       +   +G   S  +      V+ + 
Sbjct: 67  VVIYTRSSKCAAIRAEEGVTGALCPPSSKTPFRQLSASEQIGGYPSIEQMEELSEVDPIT 126

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVI 207
           V+  G+ + +      +F  +                      L+  +    +     ++
Sbjct: 127 VDSEGRCLIL---EFPAFVLIGVYCPADRDETRDDFRLGFFNLLEVRVRNLVKMGKRVIL 183

Query: 208 AGDFNR----------------------KINYLGNNDDFWKTIDPNDSL----------- 234
           AGD N                       +     +   F + + P  S            
Sbjct: 184 AGDLNTCAGAIDSAPALERIRKGTETEEEYLSYPSRRIFNRLVRPVGSTGDTHDTETPPV 243

Query: 235 --IRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                 +    R                     IDY +   N   + ++ +         
Sbjct: 244 LRDLCREFHPGRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQ------- 296

Query: 284 DIKSRGKRLSDHCPISIDYD 303
                G   SDHCP+     
Sbjct: 297 ----EGLIGSDHCPVYASIS 312


>gi|282159248|gb|ADA78639.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 258

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 87/303 (28%), Gaps = 72/303 (23%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++N N +        W               ++ K  D D + +QE  +       F +
Sbjct: 1   MTFNANGIRAAARKGFW---------------EWFKTQDVDFLCMQETKAQ------FHQ 39

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
               I +         K              KK    + +   L  A D           
Sbjct: 40  LEKDIEHFPTGYYYEFKDAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRY------- 92

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
              ++ + +   +  ++L S    D  +           Q  +  K+ + ++ ES   F+
Sbjct: 93  ---IQFDYENFSIASLYLPSGSSGDVRQ-------EYKMQFLEKYKEILKEQVESGRDFI 142

Query: 207 IAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + GDFN     +   +                 +   I  +   +   +  +        
Sbjct: 143 VCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQAWLDHIFDDLGWVDTFRVINHEPLQYTW 202

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             N+           IDY +        ++ ES         D   +    SDH P++I+
Sbjct: 203 WSNRGQARANNVGWRIDYHISTSALKDKVVPES---------DYVYKENWFSDHAPLTIN 253

Query: 302 YDF 304
           YD+
Sbjct: 254 YDY 256


>gi|281348003|gb|EFB23587.1| hypothetical protein PANDA_001388 [Ailuropoda melanoleuca]
          Length = 259

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 23/251 (9%)

Query: 59  QYAKNLDADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           Q  K    DI+ L E+   N      + +    N+         + +   R++  + + A
Sbjct: 2   QVIKRC--DIILLMEIKDSNNMICPTLMERLNGNSRRGIMYNYVISSRLGRNTYKEQY-A 58

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
              ++K V V ++SY     +   +   +R    +  +     +    I         S+
Sbjct: 59  FLYKEKLVSV-KKSYLYHDYQAGDADVFSREPFVVWFQSPYTVVKDFVIVPLHTTPETSM 117

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +     +      + +W              F+  GDFN   +Y+         +  +  
Sbjct: 118 KEIDELADVYWDVKRRW----------KTENFIFMGDFNAGCSYVPKKAWKNIRLRTDPE 167

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL- 292
            +    +++              I   +  Q     ++ +S S   + +    +  + L 
Sbjct: 168 FVWLIGDQEDTTVKRSTSCAYDRI--VLRGQEIISSIVPKSNSTFNFQKAYELTEEEALD 225

Query: 293 -SDHCPISIDY 302
            SDH P+    
Sbjct: 226 VSDHFPVEFKL 236


>gi|302543866|ref|ZP_07296208.1| putative integral membrane protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302461484|gb|EFL24577.1| putative integral membrane protein [Streptomyces himastatinicus
           ATCC 53653]
          Length = 345

 Score = 62.6 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/280 (11%), Positives = 70/280 (25%), Gaps = 64/280 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+      +G                 L    +    D+V +QE  +  A A  
Sbjct: 126 LRVLTANLEFGQATDG-----------------LLTALRRERPDVVSVQECDAGCADA-- 166

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  +  +  R     +           A+        ++  P   +          
Sbjct: 167 -------LGSAAVRRAYPYRIIVTGSPAEGSAILSNRPLTRERDVPGELSMPG------- 212

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +  I G  + +   H                   +   +   L+ +         
Sbjct: 213 ----AVARIAGVTLRLQVAHPMPPMPGQ---------LDVWRTELGRLRTYAAG--RGDQ 257

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P +IAGDFN   ++    D     +  +       +       +         ID+ ++ 
Sbjct: 258 PTLIAGDFNATQDHAAFRDLLDTGMRDSARATGVSRTPSWP--STTTPVLGAQIDHVLVS 315

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                 +    R +DH  + +D D
Sbjct: 316 DALRPR--------------TARFLDLRNTDHRALLVDLD 341


>gi|254473115|ref|ZP_05086513.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio
           sp. JE062]
 gi|211957836|gb|EEA93038.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio
           sp. JE062]
          Length = 282

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 75/248 (30%), Gaps = 26/248 (10%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            +    D D V  Q    +  V +  P++      + + ++   ++   +    A  V +
Sbjct: 40  DWLAYRDGDHVLPQRANFFRDVCEALPEHVAVFCPAAQGVLWDDEKSVPSQWGLATFVHR 99

Query: 119 KNVRVLQQS---YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
               + Q     +    A        +R A  + V  +     V+ I         + + 
Sbjct: 100 SFPIIGQVQGFVHKGYSADGYGEHPRSRSAHGVRV-YDYASDRVVSITQMHGLRDLNGKM 158

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                      QA+ L        E     VI GDFN + +         + ++ +  + 
Sbjct: 159 DTPD----RLAQAKRLLKISQAVSEPEDLRVICGDFNVEPDSETI-----RLLEADGLVE 209

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                       +   +     DY ++D    +     +F  +   E         +SDH
Sbjct: 210 LVKHYGFETTRNSYYKKPGKFADYMLID----QIEQISTFQVLQKPE---------VSDH 256

Query: 296 CPISIDYD 303
           CP+ +  +
Sbjct: 257 CPLVLTLN 264


>gi|254443016|ref|ZP_05056492.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
 gi|198257324|gb|EDY81632.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
          Length = 370

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 82/328 (25%), Gaps = 54/328 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               + L ++NI  L ++      +   KR    +  + +       D V +QE+   + 
Sbjct: 39  AEDNLLLSTFNIRDLGKRNR----RGWGKRLPESWFYIAETISRF--DFVAVQEVNELDE 92

Query: 80  VAKVFP--KNTWCIFYSTERLINHSK-----RDSNNDIHTAI------AVRKKNVRVLQQ 126
             K+       W    + E                ++            V   N+ +   
Sbjct: 93  WQKIMSILGPDWSYIATDETDPMLGGNGERMTFVYDNRKVRFQSIAGEIVLPPNMLISSA 152

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
              + G K        R       +    K  +  +HL    F  +           +  
Sbjct: 153 QIEIDGKKVKAGNQFKRTPFIASFQSGWLKFDICTVHL---YFGANYGEKLDQRVEEIGT 209

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN-RKINYLGNNDDFWKTID-PNDSLIRFPKEKDSR 244
            A++L     +         + GDFN     +        +    P     +     +  
Sbjct: 210 IAKYLATRADRALGDDRALFLLGDFNIVSPEHRTMKALTAEGFKVPQALRDKPTTGTEKY 269

Query: 245 CNANKNLRNKIPIDYF-------VMDQNAYKFLIQESFSEILYNED-------------- 283
            +          ++Y        +        L ++ F++  ++                
Sbjct: 270 YDQIAFKTKPEVLEYVESRSADPLKRNAGVVKLFEKVFTDNEFDAYKSIVKTKTTAGKKA 329

Query: 284 ---------DIKSRGKRLSDHCPISIDY 302
                        R  + SDH P+ +  
Sbjct: 330 TTQAQLKKAYQNWRTYQFSDHYPMWVRL 357


>gi|260906096|ref|ZP_05914418.1| 5'-nucleotidase domain-containing protein [Brevibacterium linens
           BL2]
          Length = 965

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/360 (11%), Positives = 84/360 (23%), Gaps = 81/360 (22%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGV----------------SLWKNSVKRTTSDYT---- 55
              +V  +V + S+N+       G                 ++      R  ++      
Sbjct: 464 APEAVGGQVSMASFNVLNYFTTTGDQLSGCDYYEDRGGNPITVRGGCDARGAANAESLKR 523

Query: 56  ---LLRQYAKNLDADIVFLQEMGSYNAVAK--------VFPKNTWCIFYSTERLINHSKR 104
               +      LD  +V L E+ +  A  K        +  +            +     
Sbjct: 524 QETKIVSAINKLDTSVVSLMEIENSAAFDKDRDDALETLVERLNEAAGTDKWDFVPSPAD 583

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--------KK 156
              ++     A+  +   V  Q    +   D  + +  R  +                K 
Sbjct: 584 VPADEDVIRTALIYQPAEVAPQKDSTI-LDDEAAFSNAREPLSQAFAPKDEFGEADTDKT 642

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCS-----LLSQQAQWLKDWI--TQKKESLVPFVIAG 209
              +  H KS        N  S            +QA  L D+    ++        + G
Sbjct: 643 FVTISNHFKSKGSGSDPGNEDSGDGQGASNADRVKQATSLVDFAGEQKEAADSDFVYLLG 702

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM------- 262
           DFN             +            ++ D              +D+ +        
Sbjct: 703 DFNAYTQEDP-----MQVFYEAGFKDVASEKTDKST--YVFKSRTGSLDHVLALDSSGGS 755

Query: 263 ------DQNAYKFLIQESFSEILYNEDDIKSRGK--------------RLSDHCPISIDY 302
                   +++  +       I   E       +              R SDH P+ +  
Sbjct: 756 GAQAELPSSSFDAITGADVWNINSVEALALEYSRFNYNAGDFYAPDQFRASDHDPVVVGL 815


>gi|290960999|ref|YP_003492181.1| hypothetical protein SCAB_66421 [Streptomyces scabiei 87.22]
 gi|260650525|emb|CBG73641.1| putative membrane protein [Streptomyces scabiei 87.22]
          Length = 349

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 85/319 (26%), Gaps = 85/319 (26%)

Query: 2   IRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48
           +R+   ALV  LVP                     + +V+ N+N  +     +       
Sbjct: 95  VRRSATALVALLVPTVVWLNTFGGLVTSKTVGGGDLTVVTHNVNADNADPSGT------- 147

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                     +   +  AD+V L+E+              +    +     +        
Sbjct: 148 ---------AREVASSGADVVALEELTENAV-------PVYEKALAATYPYHEVVGTVG- 190

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
                          L   Y + G +    + G  RA+   V      + V   HL S  
Sbjct: 191 ---------------LWSKYRMSGTEPVDIKLGWERAMRSTVATPDGPVAVYVAHLPSVR 235

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                  T         + A  L + I    E +   V+ GD N  +N         + +
Sbjct: 236 VKLEAGFT----ARQRDKSANALGEAIAD--EPIRQVVLLGDLNGTMND--------RAL 281

Query: 229 DPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
           +   + +R  +                   ID  ++       +   +   +        
Sbjct: 282 NAVTAQMRSTQGAAGDGFGFSWPASFPMARIDQIMVRG-----MEPRASWALP------- 329

Query: 287 SRGKRLSDHCPIS--IDYD 303
              +  SDH P++  +  D
Sbjct: 330 ---ETGSDHLPVAARVTID 345


>gi|300712153|ref|YP_003737967.1| endonuclease/exonuclease/phosphatase family protein
           [Halalkalicoccus jeotgali B3]
 gi|299125836|gb|ADJ16175.1| endonuclease/exonuclease/phosphatase family protein
           [Halalkalicoccus jeotgali B3]
          Length = 364

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 65/238 (27%), Gaps = 22/238 (9%)

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR----VLQQSYPLLGAKDSFSRAGNR 143
            +    ++   I+     S  +   A             V +    L   +    R  ++
Sbjct: 126 HYAFAVASRHPIDEDGIRSFREFRWADMPDNLLPVEGDGVDEDGLYLTEEETEVYRLSSK 185

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQK--- 198
             +++ + + G+ +  L  H     F          +   +   A ++    +I      
Sbjct: 186 THIDMPICVAGETVHGLFAHPTPPTFDGENNFNGRWNHDEVRFFADYVAGEGYIYDDGGT 245

Query: 199 ---KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI---RFPKEKDSRCNANKNLR 252
                    +V+ GD N   +     D   K +  N+             ++       R
Sbjct: 246 AGGLADDASYVLLGDMNAAPDGDRPLDPAGKFLFENEDFTTDRLPTSPGGAQRGNRYATR 305

Query: 253 NK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      IDY +   +         +     +E  + S  +  SDH  +  D +
Sbjct: 306 FGGDIEGVVEQIDYVLPSPDLSVRDSAAVWPSEDSDERGLLSDVRTASDHRLVWADIE 363


>gi|256960084|ref|ZP_05564255.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Merz96]
 gi|256950580|gb|EEU67212.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Merz96]
          Length = 264

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 75/285 (26%), Gaps = 53/285 (18%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWC 90
            +RT      + +   + +++I+ LQE+    A  KV                  ++ + 
Sbjct: 3   RRRTIKKLEEIAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPIATQTPIHEDNFA 62

Query: 91  IFYST--------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                                           A+  K    L     L+      +    
Sbjct: 63  YLIVQYLAEKGQNYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRT 120

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R+ +    E +   + V+  H   +             C+  + +   L+ ++   +   
Sbjct: 121 RKILVAETESSKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLATGQ--- 167

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PI 257
            P VI GD N      G        +   D+ +   +         K    +       I
Sbjct: 168 QPLVILGDLNNPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRI 227

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           DY  +          + +    Y       +   +SDH  + I  
Sbjct: 228 DYAFV---------PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 263


>gi|160937934|ref|ZP_02085292.1| hypothetical protein CLOBOL_02828 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439160|gb|EDP16914.1| hypothetical protein CLOBOL_02828 [Clostridium bolteae ATCC
           BAA-613]
          Length = 290

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 78/323 (24%), Gaps = 77/323 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N ++L+E E             S           +  DI+ LQE+    +    
Sbjct: 1   MKIMTLNTHSLAEPE-----------YESKLAAFAGSLVQIKPDIIALQEVNQSRSAPPA 49

Query: 84  FPKNTWCIFYSTER-------------------------------------LINHSKRDS 106
                    Y                                               +  
Sbjct: 50  ASGWLRESGYVPCCAKDLNTVSPCASRAVIRADNHALNLALLLARAGVSYQWTWTPAKVG 109

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  +AV  ++  +    + + G +D  +    R+ + +         +   +H+  
Sbjct: 110 YGIYDEGLAVLSRSPILGTSQFYITGIRDYENWK-TRKILGINTRTEYGNEYFYSVHMGW 168

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
                     ++ S      Q   +   ++   E      + GDFN   +  G   D   
Sbjct: 169 ----------WNDSEEPFEGQWNRISSGLSPLAEE--RLWLMGDFNSPAHITGQGRDLIL 216

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEIL 279
                D+             AN     +         IDY    +             I 
Sbjct: 217 ASGWFDAYDLAASRDSGVTVANAIDGWREQGEIPGMRIDYIWTSRR---------VPVIS 267

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
                  +    +SDH  I  +Y
Sbjct: 268 SRTIYDGTSFPVVSDHFGIITEY 290


>gi|325920808|ref|ZP_08182709.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325548705|gb|EGD19658.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           gardneri ATCC 19865]
          Length = 410

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 48/412 (11%), Positives = 98/412 (23%), Gaps = 118/412 (28%)

Query: 1   MIRKYVL-ALVFFLVPCT--ASVAQK-------------VRLVSWNINTLSEQEGVSLWK 44
           MI+  +L AL      C   A  +               +R+ ++N +  S++ G  + +
Sbjct: 1   MIKPILLLALTMLCAACAHRAPSSDTAPGASAAAPEPAHLRIATYNTSLYSDEAGGLVRE 60

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
                  +    +    + +  D+V L E   ++   +             +     + R
Sbjct: 61  LQGDSAHAR--KIAAVLQRVRPDLVLLNEF-DFDPEHRAADLFQQRYLQVAQPGGGEALR 117

Query: 105 DSNND--------------------------------------IHTAIAVRKKNVR---- 122
                                                          + V  +       
Sbjct: 118 YPYRYLAPVNTGVPSGLDLDNNGTVGGDGRSRGNDAWGYGLHPGQYGMLVLSRYPIDAQA 177

Query: 123 --------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK------------IWVLDI 162
                          L     S  ++  R A+   + ++ K             +  L  
Sbjct: 178 VRSFQLLKWSALPGALRPTDPSSKKSFYRDAIWAQLRLSSKSHWDVPVRTPLGVVHALVS 237

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWL-----KDWITQKK------ESLVPFVIAGDF 211
           H     F  + +   + +   L    ++L       W+   +       +   FVI GD 
Sbjct: 238 HPTPPVFDGAEKRNAARNHDELRLWREYLDNPNDAAWLCDDQGRCGGLPADARFVILGDL 297

Query: 212 NRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDSR---------------------CNANK 249
           N    +  G +D     I     L       D                            
Sbjct: 298 NNDPVDGAGRHDAIRTLITHPRVLQYPTPHSDGGTEKTAEYAALGIAHTGDPQQVTGDFG 357

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                + +DY +  +     +    F       D   + G   SDH  + +D
Sbjct: 358 PQAGTMRLDYVLPSRQFT-LIGSGIFWPASSAPDAAIADG---SDHHAVWVD 405


>gi|260430894|ref|ZP_05784866.1| endonuclease/exonuclease/phosphatase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260418335|gb|EEX11593.1| endonuclease/exonuclease/phosphatase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 333

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 80/309 (25%), Gaps = 61/309 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76
            + + +WN+                            +   +  DIV L E+        
Sbjct: 57  TLSVAAWNVERCLFP-----------------AETAAHLAPVAPDIVLLSEVDHGMARTA 99

Query: 77  -----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----IHTAIAVRKKNVRVLQQ 126
                    A +     + + +    L   ++R    D          A+          
Sbjct: 100 QRHTTEEMAAHLNMAYAFGVEFHELDLGGPTERAFCRDDFNTLGWHGNAILSAVPFSRTA 159

Query: 127 SYPLLGAKDSF-----------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
              L      F            R G R A+   V      + V+  HL+S         
Sbjct: 160 LLRLDDHGHWFAADSGAADPDQPRLGGRMAILAEVPTKAGPLCVVSTHLES--------- 210

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
             + +      Q + L D +       +P +I GD N   +   + D   +T+       
Sbjct: 211 --NAAADHRHAQFEKLLDAVDAFAP-DMPVLIGGDLNTGNHLPPDFDWRRETLFSMAEAR 267

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN-EDDIKSRGKRLSD 294
            +     +  +  +        D  +       +      + +       + + GK LSD
Sbjct: 268 GYSWAFTAEGHTTRPSLITPHPDRVM----KLDWFAGRGLTCLDRGLLPSLTAEGKPLSD 323

Query: 295 HCPISIDYD 303
           H  +    +
Sbjct: 324 HDCVWCRVE 332


>gi|222618840|gb|EEE54972.1| hypothetical protein OsJ_02572 [Oryza sativa Japonica Group]
          Length = 1194

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 30/206 (14%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSV--KRTTSDYTLLRQYAKNLDADIVFLQ 72
               A++ +++S+NI  + L+++      +              L         DI+ LQ
Sbjct: 474 PPRQAERFKVLSYNILADYLAQEHQFLYERIPSFIMDWNWRKEKLVFEFGLWSPDILCLQ 533

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+  +  + +      +   +                   AI  R    ++  Q      
Sbjct: 534 EVDKFTDLEQEMATRGYNGIWKMRTGNATDG--------CAIFWRTARFQLRYQEDIEFN 585

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D          +E       K+I V + H+                  +   Q + L 
Sbjct: 586 KIDLRDNVAQICVLEA------KQIMVCNTHVLYNPKRGD----------IKLGQVRTLL 629

Query: 193 DWITQKKE--SLVPFVIAGDFNRKIN 216
           D +    +  +  P +I GDFN    
Sbjct: 630 DRVYALSKTWNDAPVIICGDFNSTPK 655



 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 28/93 (30%)

Query: 212  NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
            N    ++ +N          +               + N +    +DY    ++     +
Sbjct: 1100 NEDCTFVEHNLKVRSVYTDVEDFEGTKDANKEPLVTSYNRKFMGTVDYIWASEDLQTVQV 1159

Query: 272  QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             ++F + +  +       K  SDH  +  +  F
Sbjct: 1160 LDTFPKEILKQTIGFPTKKWGSDHIALVCELAF 1192


>gi|257453990|ref|ZP_05619266.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus
           SK60]
 gi|257448655|gb|EEV23622.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus
           SK60]
          Length = 376

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 59/255 (23%), Gaps = 45/255 (17%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           T  +   L         DIV   E               W    S              D
Sbjct: 111 TNPNKQALIDLIHTHQPDIVLTLETD-----------QVWQDALSPIEADYPFNVKVPLD 159

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               + +  K   +  Q   L+           R A+       GK +W+  +H      
Sbjct: 160 NLYGMHLYSKLELINPQVKYLVVDDIPSIHTQVRLAM-------GKVVWLYCLHPMPPSP 212

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            ++ ++    +          L         + +  ++AGD N            ++ I 
Sbjct: 213 TEADKSVTRDA---------ELLMVGKHINANDLTVIVAGDLNDVAWSHTTR--MFQRIS 261

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               L      K            +  +D+     +              +    +    
Sbjct: 262 --GLLDPRIGRKFINTFHASYPFLRWALDHVFHSNH--------------FTLVSMARMP 305

Query: 290 KRLSDHCPISIDYDF 304
              SDH P+     +
Sbjct: 306 NIGSDHFPVLTTLQY 320


>gi|254388845|ref|ZP_05004077.1| exodeoxyribonuclease [Streptomyces clavuligerus ATCC 27064]
 gi|294813139|ref|ZP_06771782.1| Putative exodeoxyribonuclease [Streptomyces clavuligerus ATCC
           27064]
 gi|326441562|ref|ZP_08216296.1| exodeoxyribonuclease III [Streptomyces clavuligerus ATCC 27064]
 gi|197702564|gb|EDY48376.1| exodeoxyribonuclease [Streptomyces clavuligerus ATCC 27064]
 gi|294325738|gb|EFG07381.1| Putative exodeoxyribonuclease [Streptomyces clavuligerus ATCC
           27064]
          Length = 283

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/325 (9%), Positives = 70/325 (21%), Gaps = 89/325 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           + + S N+N L                        ++     AD++ LQE+         
Sbjct: 2   LTVTSVNVNGLRAAAKKGF---------------VEWLAGAAADVICLQEVRAEPEQLPE 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V     W   ++       +                  V +  +  P            
Sbjct: 47  GVRRPEGWFTAHAPAGAKGRAG-----------------VSLYTRREPDEVRVGFGVPEF 89

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 +  ++ G  + V  ++L S       ++               L+        +
Sbjct: 90  AHSGRYIEADLPG--VTVASLYLPSGEVGTERQDEKYRFMDAFLPYLSELRAR---SAAA 144

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPN------------------------------ 231
               V+ GD+N   +     +      +                                
Sbjct: 145 GREVVVCGDWNIAHHEADLKNWRGNKKNAGFLPEERAWLSRVLDGGDGGEGDQGGEGGDS 204

Query: 232 ----DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEI 278
                 +         +         +           ID      +     ++      
Sbjct: 205 AGYAGYVDVVRALHPDQEGPYTWWSYRGRAFDNDSGWRIDLQAATPSLAARAVKGYVE-- 262

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
                   +  +R SDH P+++ Y+
Sbjct: 263 -----RAATHEERWSDHAPVTVVYE 282


>gi|218531799|ref|YP_002422615.1| endonuclease/exonuclease/phosphatase [Methylobacterium
           chloromethanicum CM4]
 gi|218524102|gb|ACK84687.1| Endonuclease/exonuclease/phosphatase [Methylobacterium
           chloromethanicum CM4]
          Length = 353

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 63/254 (24%), Gaps = 47/254 (18%)

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
           ++   Y            D+V L E  +            W    +  R     + +   
Sbjct: 116 QSNRHYGAALDLIAAKAPDLVLLLETDA-----------GWHAAMAPLRAHYPHRVEHPQ 164

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
           D    +    +          LL       R         +V  +G+ +    +H +   
Sbjct: 165 DNTYGLLFYSRLPLRDPTIRFLLQEDVPSLRT-------AVVLPSGEPVTFYGLHPRPPH 217

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
              S                  L     +  ++    ++AGD N       N    ++ I
Sbjct: 218 PGHSSAPRD-----------AELVVVAREVAKTKDSTIVAGDLNDVAWSHTNR--LFQNI 264

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                L              +    + P+D+    ++                  D++  
Sbjct: 265 S--GLLDPRQGRGLFSTFHAQYPFARWPLDHIFFSEHFLLS--------------DMQRL 308

Query: 289 GKRLSDHCPISIDY 302
               SDH PI +D 
Sbjct: 309 NDVGSDHFPIWVDL 322


>gi|332525705|ref|ZP_08401854.1| exodeoxyribonuclease III Xth [Rubrivivax benzoatilyticus JA2]
 gi|332109264|gb|EGJ10187.1| exodeoxyribonuclease III Xth [Rubrivivax benzoatilyticus JA2]
          Length = 227

 Score = 62.3 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 65/227 (28%), Gaps = 49/227 (21%)

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
               +    ++ + +  ++           G  D+  R      +EL  +  G+K+ ++ 
Sbjct: 24  HFHFAQKKGYSGVGLYTRHEPSDVVVGFDGGEFDAEGRW-----IELRFDKPGRKLSIIS 78

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---- 217
            +  S    +  +        LL      L        ++   F++ GD N         
Sbjct: 79  CYFPSGSSGEERQAAKYRFLDLLQPHLMAL--------KAEREFILVGDVNIAHKEIDLK 130

Query: 218 -----------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPI 257
                      L     +   +  +  +  F +             N+           +
Sbjct: 131 NWRGNQKNSGFLPEERAWMTRLLDSGVVDVFRRLNPQPE-QYTWWSNRGQAWAKNVGWRL 189

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           DY +      +   +E                +R SDH P++IDYDF
Sbjct: 190 DYHLATPALAETARREQI-----------FLAQRFSDHAPLTIDYDF 225


>gi|311893559|dbj|BAJ25967.1| hypothetical protein KSE_01160 [Kitasatospora setae KM-6054]
          Length = 312

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 70/298 (23%), Gaps = 69/298 (23%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           A+    +P  +     +R+VS N+                     D     +      AD
Sbjct: 83  AVFGGTLPDRSGSGGDLRVVSHNV----------------DEANRDPRGTARALAASGAD 126

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V LQE+ +  A                            + +   + +  +        
Sbjct: 127 VVALQELPARGA---------------QSYGEVLDGVFPYHRVLGGVGMWSRYPLRDVLP 171

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQ 186
             ++             A+   V+     + +   HL S      S   T     +    
Sbjct: 172 VEIMPWVR---------AMRATVDTPRGPLALYAAHLASVRVSALSGFGTGQRDEAARRL 222

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                      + E     V+ GDFN        +      ++   S      +      
Sbjct: 223 -------AAAVRAEPSERVVVVGDFN----GSTRDRTLAGALEGLRSAQDAAGDGFGLSW 271

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   + ID  ++       +       +           +  SDH P+     +
Sbjct: 272 PAAFPL--VRIDQILVRG-----VTPVWARTLP----------RTGSDHLPVEASVRW 312


>gi|294626812|ref|ZP_06705405.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666320|ref|ZP_06731569.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292598928|gb|EFF43072.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603922|gb|EFF47324.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 434

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 76/306 (24%), Gaps = 40/306 (13%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           + L    V    S    + ++++N+  L E    S          ++  LL         
Sbjct: 15  VTLACAGVAHAQSSVGVLDVLTYNVAGLPEGISSSNP-------ATNTPLLAPKLAPYG- 66

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
            +V +QE  +Y+A       + +    S               I   +            
Sbjct: 67  -LVHVQEDFNYHAALYAGDNHPYRTPTSG-----------GAAIGDGLNTLSNYPFNDFT 114

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                    +        +   +   NG  + V + H  +           +   +    
Sbjct: 115 RVKWDKCNGTDCLTPKGFSYMQVRLDNGVLLDVYNAHPNAGT--------ETADLAARRA 166

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTIDPNDSLIRFP 238
               L  +I     +    ++  D N +             +N+     ++         
Sbjct: 167 NISQLSQFIGTW-SAGNAVLVMMDSNTRYTRSEDNIRELIASNNLIDAWVELIKGTAPAA 225

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 C           +D  +        L    +       +   S GK LSDH P+
Sbjct: 226 GAAPLLCGTPPT-NTCEVVDKILYRAAPQLTLAANRYQLDP--GNFYDSAGKPLSDHYPL 282

Query: 299 SIDYDF 304
              + +
Sbjct: 283 YTQFGW 288


>gi|169617934|ref|XP_001802381.1| hypothetical protein SNOG_12150 [Phaeosphaeria nodorum SN15]
 gi|182676428|sp|Q0U7W4|CCR4_PHANO RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|160703518|gb|EAT80562.2| hypothetical protein SNOG_12150 [Phaeosphaeria nodorum SN15]
          Length = 597

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 44/358 (12%), Positives = 93/358 (25%), Gaps = 74/358 (20%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG- 75
              + V  +S+NI  +    Q       +S     +   L+    K  +ADIV LQE+  
Sbjct: 216 PAQETVTALSYNILCDKYCTQSQYGYTPSSALAWETRRELILGELKQRNADIVCLQEIDQ 275

Query: 76  ---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL- 131
              +     K+   +   +F+   R    ++R++      AI  +     +L +      
Sbjct: 276 DSFNEYFREKLAHYDYKGVFWPKSRARTMAEREAKLVDGCAIFYKNSKYVLLDKQLIDFA 335

Query: 132 ----------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKS----------- 166
                     G  D F+R   R  + ++        G +  V ++H+             
Sbjct: 336 NTAINRPDMKGEHDIFNRVMPRDDIGVVAFLENRATGSRFIVGNVHVFWNPAFTDVKLVQ 395

Query: 167 ------------------FCFLDSLENTYSPSCSLLSQQAQWLKD---WITQKKESLVPF 205
                                 D +   ++       ++A   ++          + +P 
Sbjct: 396 VAILMEGISKFATKWSKFPPCKDKVVYRFTNGDDEDGKEADTTQEPGPSKEYGAGADIPV 455

Query: 206 VIAGDFNRKINYLGNNDDFW-------KTIDPNDSLIRFPKEKDSR-------------C 245
           ++ GDFN   +    +           + +                              
Sbjct: 456 ILCGDFNSMPSSGVYDLITQGTIAHSHQDLGSRKYGNFTRDGISHPFSLKSSYSAIGEMT 515

Query: 246 NANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             N     +  +DY            +     +               SDH  +   Y
Sbjct: 516 FTNYVPHFQGVLDYIWYSTNTLQVVGLLGDIDKEYLRRVPGFPNYHFPSDHVALYAQY 573


>gi|225711094|gb|ACO11393.1| neutral sphingomyelinase [Caligus rogercresseyi]
          Length = 351

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 91/307 (29%), Gaps = 29/307 (9%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +     +   +R++S N+  L E+ G    K  ++R T          +N + D+VFLQE
Sbjct: 49  LAHGPPLHGSIRILSLNVWGLPEELGSQDKKERIQRLTDRLY------ENPEFDLVFLQE 102

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +        +          +    +N   R       + +AV  K      + +    +
Sbjct: 103 LWMPLDHDTISRGLQGIYIMTEFEDLNQCPRVMAPWKCSGLAVLSKFPFQEIEFHSFNVS 162

Query: 134 KDSFSRA------GNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                         N+    + +   +   +     H  +    D+       +      
Sbjct: 163 GRPSKDFIDGENLVNKGMGRVRISLAHNVSVDFFLTHTIA----DAPVGQNYTNDDARLD 218

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-------NNDDFWKTIDPNDSLIRFPK 239
           Q   L  +           +++GD N               ++         D+L+    
Sbjct: 219 QIGELM-FNGVNPSEADLVILSGDLNTGPGSKPFDLIQRFMSNTALDIYKSLDALLDPRL 277

Query: 240 EKDSRCNANKNLRNKIPI--DYFVM-DQNAYKFLIQ-ESFSEILYNEDDIKSRGKRLSDH 295
              +  + + +   + PI  DY     +    F    E F   +++  +  ++    SDH
Sbjct: 278 STYANPHNSWSWNEEKPIMFDYVFYRTKELGSFNAWTEVFYVPIFSFINEFAKKLSFSDH 337

Query: 296 CPISIDY 302
             I    
Sbjct: 338 EGIITTI 344


>gi|221640330|ref|YP_002526592.1| hypothetical protein RSKD131_2231 [Rhodobacter sphaeroides KD131]
 gi|221161111|gb|ACM02091.1| Hypothetical Protein RSKD131_2231 [Rhodobacter sphaeroides KD131]
          Length = 309

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 77/309 (24%), Gaps = 43/309 (13%)

Query: 34  LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCI 91
           L       L ++           +R   + L AD++FL  +   +    A+    + +  
Sbjct: 3   LERAGPGLLLRDIRAGKDPQILAVRCMIEALRADVLFLTGVDYDADLLAARALAGDLYPH 62

Query: 92  FYSTERLINHS-----------------KRDSNNDIHTAIAVRKKNVRVLQQSYPLL--- 131
             +                         +     D    + +  +      + +  L   
Sbjct: 63  LLALRPNAGRPTGIDLDGDGRLGGPGDAQGWGRFDGQGGMVLLSRLPLGPPRDFSDLLWA 122

Query: 132 -------GAKDSFSRAGNRRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSP 179
                        +RA  R A     E+      G  + +L        F    +     
Sbjct: 123 DLPEANLPPMPPEARAVQRLASVGAWEVPLPRTGGTALKLLLWSATPPVFDGPEDRNGRR 182

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +       A+ L   +        P ++ G  N               +  + +L     
Sbjct: 183 AGDEALFWARLLDGRLPFPAPEG-PVLLMGKANIDPLAGDGPRAAIAALLAHPALQDPAP 241

Query: 240 EKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
            +     A  + R +        DY +    A    +  S        D +     + S 
Sbjct: 242 RRPDGSRATADFRAEGGPALLRTDYIL---PARGLHVTASGVLWPPPGDPLADVAAQASR 298

Query: 295 HCPISIDYD 303
           H P+ ++ D
Sbjct: 299 HRPVWVELD 307


>gi|149237406|ref|XP_001524580.1| hypothetical protein LELG_04552 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452115|gb|EDK46371.1| hypothetical protein LELG_04552 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 527

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 39/334 (11%), Positives = 76/334 (22%), Gaps = 61/334 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            R+ S NI     +           R       ++ +       I+ LQE+  Y  +  +
Sbjct: 193 FRIYSHNIKNGGNRPLTPGESLWNDRVHDLAMSMKFHITAN--TIITLQELYKYQVLDIM 250

Query: 84  F------------------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
                                 TW  +             +    +T       +  +  
Sbjct: 251 NYLNLDGDAGVAGGSNSDGDVPTWDFYGVGRIDGAEYGEFAPIIYNTKEWELVYSDTIWL 310

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                  + + +     R    + +    +   V+++      F    +     S  L+ 
Sbjct: 311 NEIDTRISYEGWDALYPRICSYITLRHR-ELQNVINVFNTH--FDHIGKLARKGSAKLIM 367

Query: 186 QQAQWLK-DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-----RFPK 239
              Q L+       + +  P  I GD N +             +D              K
Sbjct: 368 DTVQDLQKQQCKNIQGNHWPAFIMGDLNAEPKEESIKILKDGFVDSVTLATSNNKYGHTK 427

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL-------------------- 279
              +       L     IDY        + +                             
Sbjct: 428 STVTGFEGEVLLNGGQNIDYIFA-PKYAQLIDDVKDKVDNKAKSNKEKKEKCDELKKSNA 486

Query: 280 -----------YNEDDIKSRGKRLSDHCPISIDY 302
                      Y     +  G+ +SDH P+  DY
Sbjct: 487 FAERADLTLLLYGMLHSRFNGRYMSDHRPLLADY 520


>gi|297830504|ref|XP_002883134.1| hypothetical protein ARALYDRAFT_898218 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328974|gb|EFH59393.1| hypothetical protein ARALYDRAFT_898218 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 435

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 20/220 (9%)

Query: 14  VPCTASVAQKVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
               +  +++  +VS+NI         ++  S       +      L+ +    L+ DI+
Sbjct: 89  TTPVSQASERFTVVSYNILGDRNSSYHRDLYSNVSFPYLKWGYRKRLICEELIRLNPDII 148

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            +QE+  Y  +     K  +          ++ +R  +N    A+  +    RVL++   
Sbjct: 149 CMQEVDKYFDLFSTTEKAGYA--------GSYKRRTGDNIDGCAMFWKADRFRVLERENI 200

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                           +EL      +KI + +IH+        ++     S         
Sbjct: 201 EFSQFGMRDNVAQLAVLELRKSNKSRKILLGNIHVLYNPNKGDVKLGQIRSLCS------ 254

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
             K  +  KK   +P V+ GDFN        N      ++
Sbjct: 255 --KAHLLSKKWGDIPIVLCGDFNSTPQSPLYNFLASSELN 292


>gi|226225952|ref|YP_002760058.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
 gi|226089143|dbj|BAH37588.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
          Length = 465

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 73/301 (24%), Gaps = 51/301 (16%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            P        +R++S N       +                  L +        ++  QE
Sbjct: 202 TPPLQVAPNGLRILSLNAQGGGVVQ----------------QHLDEMMAAYTPSVMAFQE 245

Query: 74  MGSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNV-----RVLQQ 126
                    +  +  W    F++   L        ++    A A            V++ 
Sbjct: 246 C-GRELGQNLAKRAEWHFEQFHNLCLLSRWPVTQRDSMPRAAFARISDLGYGGAAIVIRY 304

Query: 127 SYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           +                 A + L   +  + +   D  L +       +     +   L 
Sbjct: 305 TIAHPAGPFELVNLHLETARKGLEGILGDQGLLRDDTGLPNVPASLETDRFAINADIRLR 364

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +  +    + + +  +  P V+ GDFN           +W  +           +   R 
Sbjct: 365 ESERA--SYWSARHANTTPIVVVGDFNM-PVESSIFRAYWSALSSA-------FDAGGRG 414

Query: 246 NANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   +     ID+ +    A ++                       SDH P+  D 
Sbjct: 415 FGFTKHEGRWLRIRIDHVLF---APQWFETSGAWV----------GNDVGSDHRPVIADL 461

Query: 303 D 303
            
Sbjct: 462 T 462


>gi|161869112|ref|YP_001598278.1| exodeoxyribonuclease [Neisseria meningitidis 053442]
 gi|161594665|gb|ABX72325.1| exodeoxyribonuclease [Neisseria meningitidis 053442]
          Length = 206

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/227 (10%), Positives = 57/227 (25%), Gaps = 51/227 (22%)

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
               +    ++ +AV  K           +G          R      V  +  ++ V+ 
Sbjct: 4   HWHCAEKRGYSGVAVYSKRKP----DNVQIGMGIEEFDREGRF-----VRCDFDRLSVIS 54

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           ++L S    +  +        +  +        +   K      V+ GD+N     +   
Sbjct: 55  LYLPSGSSAEERQ-------QVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK 107

Query: 222 DDFWKTIDPN---------------DSLIRFPKEKDSRCNANKNLRNK---------IPI 257
           +      +                        +             N+           I
Sbjct: 108 NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRI 167

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           DY ++        +                + ++ SDH P+ ++YD+
Sbjct: 168 DYQMVTPELAAKAVSAHV-----------YKDEKFSDHAPLVMEYDY 203


>gi|83767183|dbj|BAE57322.1| unnamed protein product [Aspergillus oryzae]
          Length = 476

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 77/348 (22%), Gaps = 76/348 (21%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             +    ++R+ + N   L       L K   +R +     L     +   +IV LQE  
Sbjct: 8   YPSEAPSQIRIFTLNCWGL-----KYLAKYRHERLSEIGRQLA--LADPAPEIVGLQECW 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL---- 131
           +      +  +    +         + K      +   +A+  K        Y       
Sbjct: 61  TQQDYESIREQTRHLL--------PYGKFYFGGVMGAGLAILSKWPIEESSMYGYPLNGR 112

Query: 132 -GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             A         +      V        V ++           E   S  C   + QA  
Sbjct: 113 PTAFFRGDWYVGKGVACARVRFGPGASDVAEVFCTHLHAPYEKEPNDSYIC-HRTAQAWE 171

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY--------LGNNDDFWKTIDP------------ 230
           +   +    E     +  GDFN   +              D W+ I P            
Sbjct: 172 IAKLMRGAAERGHLAIGLGDFNMVPSSFAHQLIRAHSPVQDVWQAIYPDSSVAAPIDPIE 231

Query: 231 ------------NDSLIRFPKEKDSRCNANKNLRNKI-------------------PIDY 259
                       N  +     +             K                     +DY
Sbjct: 232 QKRGKPTPSAEFNLHVNGATCDGKFNTWRWTKEERKRLEKGEEIAVDKDAPCPRGKRLDY 291

Query: 260 FVMD----QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +       A+        S  +       +    LSDH  +     
Sbjct: 292 IFVGDGGYPPAFPAPQWSVESVNIGMTQRHPTLRCSLSDHFAVEATIT 339


>gi|323524486|ref|YP_004226639.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
 gi|323381488|gb|ADX53579.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
          Length = 265

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 78/301 (25%), Gaps = 65/301 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           ++  +    VSWN++      G   W             ++++ ++  AD  FLQE  + 
Sbjct: 11  SAAPKDFVAVSWNLHKGRTPLGFQAW-----------QAMQRWVQSTHADAYFLQEAMAR 59

Query: 78  NA----------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                             +  V+      I  + +  I               A+   + 
Sbjct: 60  RMPSPVLASSFGAPVTDPLNDVWHCQATEIARALQLEIALGPNVFKPSWRHGNAILSPHP 119

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             L   + +        R   R  +       G  + +L  HL                 
Sbjct: 120 LDLGGRWDISA-----HRFEKRGLLVARATFGGHSVTLLCAHLALTRS------------ 162

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
               +Q  W+  WIT++     P V+AGDFN   N           +     L       
Sbjct: 163 -ARLRQMNWIAHWITKEAPDG-PLVLAGDFNDWRNDSVP-------LFAEHGLQEVATLL 213

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                        + +D   +        IQ +                 LSDH P    
Sbjct: 214 GESGRTFPAFSPALALDKMFVRGMKPVEWIQPT------------QETAWLSDHLPYMAR 261

Query: 302 Y 302
            
Sbjct: 262 L 262


>gi|134297228|ref|YP_001120963.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
 gi|134140385|gb|ABO56128.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
          Length = 271

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 79/310 (25%), Gaps = 68/310 (21%)

Query: 12  FLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +P     A   ++  VSWN++      G + W             +R + ++  AD+ 
Sbjct: 6   LSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWN-----------AMRNWMQSTHADVY 54

Query: 70  FLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           FLQE  +                  A   V+      I  + +  I              
Sbjct: 55  FLQEAMARRMPRPMLAPGFGAPMEEAGDDVWHCQATEIAQALDWQIALGPNVFKPSWRHG 114

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+   +   L   + +        R   R  +     + G + + +L  HL        
Sbjct: 115 NAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGARPVTLLCAHLALT----- 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                    +   +Q  W+  WI +      P V+AGDFN   N           +    
Sbjct: 165 --------RAARLRQMHWIAHWIVRNAGDD-PLVLAGDFNDWRNDSV-------ALFGEI 208

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                    + +D   +                             L
Sbjct: 209 GLSEVATLLGESGRTFPAFSPALALDKMFVRG------------LTPLEWQAPSGETAWL 256

Query: 293 SDHCPISIDY 302
           SDH P     
Sbjct: 257 SDHLPYIARL 266


>gi|227551056|ref|ZP_03981105.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX1330]
 gi|227179814|gb|EEI60786.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX1330]
          Length = 276

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 76/310 (24%), Gaps = 66/310 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------- 75
           ++ ++ N +  L  +                   L +     D +++ LQE+        
Sbjct: 1   MKFMTLNTHSWLEPEP------------EKKLQELAEKILLEDYEVIALQEINQLLESEE 48

Query: 76  -SYNAVAKVFPKNTWCIFYST----------------ERLINHSKRDSNNDIHTAIAVRK 118
                + K  P                                      +      A+  
Sbjct: 49  ADPPKLTKFCPVENQVPIRKDNFAYCLVQLLKEQGKEYFWSWEMSHIGYDKYEEGNALLT 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K    L+     +           R+ +    +I+ + I+V   H   +    S      
Sbjct: 109 KRP--LESQVLTVSESQKKEDYRTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEW 166

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            +      + +              P    GDFN   +  G +      +   DS +   
Sbjct: 167 KNLENYFFETRA-------------PLFFLGDFNNPADSEGYHIVKKSGLLLQDSYVIAN 213

Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           ++  +       +  +    K+ ID+  +          E      Y           +S
Sbjct: 214 EKGKAATVEKKIDGWEQNTEKLRIDFIFV---------PEGVQVKKYQRIFDGIDSPIIS 264

Query: 294 DHCPISIDYD 303
           DH    I+ D
Sbjct: 265 DHYGAEIEID 274


>gi|307330479|ref|ZP_07609622.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
 gi|306883904|gb|EFN14947.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
          Length = 279

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 63/302 (20%), Gaps = 53/302 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             T   A  VR++S+NI                     D   L +  +    D+V +QE 
Sbjct: 9   STTGPDAAVVRVLSYNIR----------------SMRDDREALARVIRACTPDVVCVQEA 52

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             +    K                       +         +           +      
Sbjct: 53  PRFFRWRKAAAWLARETGLVYT---------TGGATAAGPMILTSL--RAHVEHAEDILL 101

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------------S 180
                   R     ++   G                     T S               +
Sbjct: 102 PRVPGLHRRGFATAVLRFGGGHRDPGARESDPGARESGDGATESADGVRLGVVSCHLSLA 161

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            +   +QA             +   + AGD N + + L       K  D   +     + 
Sbjct: 162 EAERYEQAG--LLLDHLAALDVPYAIAAGDINDRPDGLAFRRIAGKLRDGWTTEPWGSEA 219

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +  + +        ID     +                 + D+ +      DH P+  
Sbjct: 220 TSNPKDPH------QRIDAVFASEGVEIIGCGVPAGLPGVTDADLLAAT----DHLPVLA 269

Query: 301 DY 302
             
Sbjct: 270 AL 271


>gi|302926007|ref|XP_003054208.1| hypothetical protein NECHADRAFT_74696 [Nectria haematococca mpVI
           77-13-4]
 gi|256735149|gb|EEU48495.1| hypothetical protein NECHADRAFT_74696 [Nectria haematococca mpVI
           77-13-4]
          Length = 541

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 39/335 (11%), Positives = 68/335 (20%), Gaps = 72/335 (21%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           N+ TL+    + +      R       L          IV LQE  +      +      
Sbjct: 32  NLLTLNCWGLLHISTLRAPRLDEIGRQLA--ILAPAPHIVALQECWTQEDYQAIRRHTRQ 89

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144
            + Y                    +A+  +        +         A         + 
Sbjct: 90  ILPYGKFYHSGAFGG--------GLAILSRWPIEESTMFKYPLNGRPTAFWRGDWYVGKG 141

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +    ++  V+++           E   +  C   + QA  L   +    E    
Sbjct: 142 VACAKIRYGPRRKDVIEVFNTHTHAPYEPEPKSTYIC-HRTAQAWELSKLLRGAAERGHL 200

Query: 205 FVIAGDFNRKI--------NYLGNNDDFWKTIDPN--------------------DSLIR 236
            V  GDFN                  D W+ + P+                         
Sbjct: 201 VVAMGDFNMLPLSLAHRLITSHAPVRDVWRVLHPDSALGPASHPAEKARRRPIPTADFNL 260

Query: 237 FPKEKDSRCNANKNLRNKI-----------------------PIDYFVMDQNAYKFLIQE 273
                 S    N     K                         +DY              
Sbjct: 261 LENGATSDSVYNTWRWTKNQQNRLRSGQSYDVSPDAIDPRGKRLDYIFTSTGVEPDAPAT 320

Query: 274 SF-----SEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +      S I+   +        LSDH  +     
Sbjct: 321 TPGWIIKSAIVSMTERHPELNCSLSDHFAVQATLT 355


>gi|190345694|gb|EDK37621.2| hypothetical protein PGUG_01719 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 310

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 76/279 (27%), Gaps = 33/279 (11%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           +   NI   +    +       +R       + + + NL   +V LQE+   N +  V  
Sbjct: 57  VYCHNIRQEN-NNMMDGETPWSQRKAGVIQSIVENSSNL-PTLVGLQEVK-QNMLNDVMD 113

Query: 86  KN--TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +       I   K+         P   +K  +  A  R
Sbjct: 114 GLGKHWTHFGVGRSDGKSKGEFAPIIYQPEIWNLKQGKTYWLGQTPDRPSK-GWDAALER 172

Query: 144 RAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                + E   +GK +  L+ H      L    ++                  I   K  
Sbjct: 173 IVTVCIFEHRQSGKVVTFLNTHYDHKGKLARENSSKQ---------------IIDIMKSY 217

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               ++ GDFN + +           +       +  +  +      K    +  ID+  
Sbjct: 218 PGASILVGDFNSQPHQ-EAYKTLSTQLKDTSCNCQQRRGPEHTITGFKRGEQETSIDFIW 276

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + + +   + +  G   SDH P++ 
Sbjct: 277 TTP---------GINILHHEVKNHEFNGHYCSDHRPVTA 306


>gi|114612838|ref|XP_001169508.1| PREDICTED: similar to KIAA1706 protein isoform 1 [Pan troglodytes]
          Length = 518

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/271 (11%), Positives = 73/271 (26%), Gaps = 31/271 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL +WN+   S    V    N   R     TLL    K     ++ +QE+    A+ K 
Sbjct: 261 LRLATWNLQGCS----VEKANNPGVREVVCMTLLENSIK-----LLAVQELLDREALEKF 311

Query: 84  FPKNTWCIFYSTERLINHSKRDSN------------NDIHTAIAVRKKNV-RVLQQSYPL 130
             +       +  +                         +            +       
Sbjct: 312 CTELNQPTLPNIRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQE 371

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
               +   +           ++    + ++++HL +   L S   + + S          
Sbjct: 372 SSPGNGHGKPAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHR---LAS 428

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + +  +     +I GDF +  +    +      I   +              + KN
Sbjct: 429 FAQTLQETLKGEKDVIILGDFGQGPDSNDYD------ILRKEKFHHLIPAHTFTNISTKN 482

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
            +    +D   + ++  K    E+     ++
Sbjct: 483 PQGSKSLDNIWISKSLKKVFTGEAELTCPFS 513


>gi|297191498|ref|ZP_06908896.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197722060|gb|EDY65968.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 356

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 76/298 (25%), Gaps = 51/298 (17%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L   L+   +     + +   N+   +     +                 +      A
Sbjct: 110 LNLFGGLLGDRSHPGGDLTVAQHNVGEGNPDPVGT----------------ARDLAASGA 153

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ L E+                 +++ +  +    +              + V     
Sbjct: 154 DVLALVELTHQVRGTYEKELAEAYPYHTVQGTVGLWSKLP--------LSDTRPVDTRMD 205

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             PL   K +  +    RA+   V  +   + V   HL S      L            +
Sbjct: 206 YGPLGDTKPAEVKMAYNRALRTTVATDQGPLAVYAAHLGSVR----LMPRGGFWTDSRDR 261

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            AQ L + +    E     V+ GD N   +       F        S      +      
Sbjct: 262 NAQALGEALA--AERNERVVLLGDLNGTTDD----RAFAGITSLMRSAQDEAGDGFGFTW 315

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             K     + ID  ++       +  +S   +              SDH P++    +
Sbjct: 316 PAKFP--VVRIDQILVRG-----VEPQSSWVLPAT----------GSDHLPVAARISW 356


>gi|71282220|ref|YP_271635.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
           psychrerythraea 34H]
 gi|71147960|gb|AAZ28433.1| endonuclease/exonuclease/phosphatase family family [Colwellia
           psychrerythraea 34H]
          Length = 334

 Score = 62.3 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 82/293 (27%), Gaps = 59/293 (20%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +  L       A +++++++NI   S+                +  LL +Y K    DI+
Sbjct: 94  LATLFANNNDKASQIKVITFNIGGGSKD---------------ELQLLVKYMK---PDIL 135

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE    N +  +F +  +    S                   + +  K          
Sbjct: 136 LLQEALKVN-LEVLFDQRYYSECIS------------------GLCILSKFPFQQTNRLN 176

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                   + A     +    E++   I +          +    +      +  +++ +
Sbjct: 177 RKMFGGWGTFATFYNVITPYGELSLANIHLETPRSVLMGAIYRHPDQQLAESTESNRELE 236

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
              + +     +    +IAGDFN       + + + +     +++I       +R     
Sbjct: 237 --VNLLNLWATNRPYTIIAGDFN----MPADENLYQQNFSLLNNVIEVKGFAFNRTKYTS 290

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  ID+ +   +     ++                     DH P+    
Sbjct: 291 WHG--ARIDHILYSDDISLSSVEVVERVKG--------------DHRPVMATL 327


>gi|302143617|emb|CBI22370.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/287 (10%), Positives = 70/287 (24%), Gaps = 65/287 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+   ++     +              ++   +    D+  +QE        ++
Sbjct: 3   LKMLSWNVRGANDVNKRRI--------------IKSVIRKQKVDLFCIQETKIQLMTDRM 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   F     +               I +      +    +       S       
Sbjct: 49  VKSLGVGRFLDWRTIEAAGAAG-------GILICWDKRSLELLEWEEGQFSISCKFR--- 98

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   +    IWV       F   D                                
Sbjct: 99  -------TVENGAIWVFTGVYGPFTKEDRECLWEEFGAIRGLW---------------GE 136

Query: 204 PFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           P+ + GDFN  ++    +           F + ++  + +    +      +     +  
Sbjct: 137 PWCVGGDFNVILSQGERSRQGRISPAMRRFAQVMNDLELVDLPLQGGTFTWSGGFQNQAW 196

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +D F++  +              +     K   + +SDH PI I+
Sbjct: 197 ARLDRFMVSPS----------WLDQFRNVTQKRLSRPISDHFPIIIE 233


>gi|237747055|ref|ZP_04577535.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS]
 gi|229378406|gb|EEO28497.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS]
          Length = 260

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 68/270 (25%), Gaps = 65/270 (24%)

Query: 59  QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++     +  V +QE+     + V  +   + +   +       +S     +       +
Sbjct: 22  EWMHQSGSHFVCVQEIKAQPDDIVPAIASPDLFHGHFGCAEKKGYSGVGIYSKTKPDKVI 81

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           R              G       A  R      ++ + K   ++ ++  S       +  
Sbjct: 82  R--------------GFGCPEFDAEGRY-----LQCDYKDFSLVSLYAPSGSSSPERQEA 122

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
                       + LK+       S   F+I GD+N                        
Sbjct: 123 KFRFMDHFFPFLEKLKE-------SEREFIICGDWNIAHKEIDLKNWKSNQKNSGFLPEE 175

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNK---------IPIDYFVMDQNAYKFL 270
                + +D    +  +        + +     N+           IDY +         
Sbjct: 176 RAWLSRILDELGLIDVYRCLHPDTTDASYTWWSNRGQAWQKNVGWRIDYQIATPGIAGKA 235

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  S             +  R SDH P++I
Sbjct: 236 VSASI-----------YKETRFSDHAPLTI 254


>gi|118089947|ref|XP_001233492.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit
           6-like isoform 1 [Gallus gallus]
          Length = 559

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/349 (10%), Positives = 87/349 (24%), Gaps = 73/349 (20%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   + DADI+ LQE+ +  
Sbjct: 186 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVSCDADIISLQEVETEQ 245

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 246 YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFSLVQKHTVEFNQV 305

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI----------------WVLDIHLKSF 167
           +       ++        +   V +++E++ +                   +L +     
Sbjct: 306 AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASKYEHGIKSLHVDKQLLIVANAHM 365

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY---- 217
            +     +       +   + + + +  + +        + +P V+  D N   +     
Sbjct: 366 HWDPEYSDVKLIQTMMFVSELKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVE 425

Query: 218 -------LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKN 250
                    N+ DF +       +      K+                         N  
Sbjct: 426 YLSNGIVADNHKDFKELRYNECLMNFSGSGKNGASEGRITHGFQLKSAYENNLMPYTNYT 485

Query: 251 LRNKIPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              K  IDY        N    L       ++ N           SDH 
Sbjct: 486 FDFKGVIDYIFYSNTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 534


>gi|326506106|dbj|BAJ91292.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 345

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 70/212 (33%), Gaps = 27/212 (12%)

Query: 16  CTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFL 71
            + S +    ++S+NI   N       + L       R  S   L+    ++ D+D+V L
Sbjct: 83  ASTSGSDACTIMSYNILADNNARNHPDLYLDVPWDALRWDSRRRLIIHEIRHWDSDLVCL 142

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+  +  +A       +   +          R  +     A   + + +R+L++     
Sbjct: 143 QEVDRFREIAAEMKSKGYECSF--------KGRTGDAKDGCATFWKSERLRLLEEDSIDF 194

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                     N  A  L+ E+NG + +VL          +           +   Q + L
Sbjct: 195 SE----FNLRNNVAQVLVFELNGTQKFVL---------GNIHVLFNPKRGDVKMGQIRML 241

Query: 192 KDWITQKKES--LVPFVIAGDFNRKINYLGNN 221
            +           +P V+AGDFN         
Sbjct: 242 LERANALAGKWDGIPIVLAGDFNSTPESAIYK 273


>gi|225430157|ref|XP_002282223.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 836

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 67/229 (29%), Gaps = 12/229 (5%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIV 69
              +S  ++  ++S+NI  + L+  +   L+ +  +           +        AD++
Sbjct: 205 AGPSSHCERFTVLSYNILADYLAVNQRSRLYFHIPRHMLDWEWRKRNIIFELGLWSADVM 264

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             QE+  +  + +      +   +                     A R K +      + 
Sbjct: 265 CFQEVDRFGDLEEELKLRGYTGIWKMRTGDPVDGCAIFWR-----ASRFKLLHEECIEFN 319

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            LG +D+ ++     ++      +   +             +           +   Q +
Sbjct: 320 KLGLRDNVAQICVLESINQNYSWSTSALPASSTGSNKVVICNIHVLYNPRRGEIKLGQVR 379

Query: 190 WLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            L D      +  +  P VI GDFN        N    + +D +     
Sbjct: 380 ALLDKAHAVSKIWNDAPIVICGDFNCTPKSPLYNFISEQKLDLSGLDRD 428


>gi|225351648|ref|ZP_03742671.1| hypothetical protein BIFPSEUDO_03245 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157992|gb|EEG71275.1| hypothetical protein BIFPSEUDO_03245 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 338

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/317 (11%), Positives = 95/317 (29%), Gaps = 75/317 (23%)

Query: 2   IRKYVLALVFFLVPC---------------TASVAQKVRLVSWNINTLSEQEGVSLWKNS 46
            RK ++AL    V                     +  VR++++N                
Sbjct: 80  KRKLLVALSVLCVIIQIIWHWGYVVPTNDRAIQPSATVRVMTFNT--------------- 124

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
            K+  +D   + +  ++   +I+ +QE+ S      +  +               ++   
Sbjct: 125 -KQGCADAQQIVRTIQSEHVEILAMQEVSSG-----LLDRLHDAGIEDHLPYSVSAQLTW 178

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
           +++    +            ++PL           +       V+ NG+K+    +H  S
Sbjct: 179 HDNGGVNVLY---------SAHPLQETTQDLIPIESSSIPAATVDFNGRKVRFGSVHPFS 229

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
               +      S            L+ +     ++   +V+ GDFN   ++       ++
Sbjct: 230 PRPSNQGLWNKSLDS------IAQLQHY-----DNGESYVLMGDFNSTWDHAS-----FR 273

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +  +          +       ++     ID+ + D+  Y                +++
Sbjct: 274 YLLGDRFTDAGESAGEGLHMTYPSVFPIAEIDHIIYDKGVYAR--------------NLE 319

Query: 287 SRGKRLSDHCPISIDYD 303
           ++  + SDH  +    +
Sbjct: 320 TKRIQGSDHKALLATLE 336


>gi|319956878|ref|YP_004168141.1| exodeoxyribonuclease iii [Nitratifractor salsuginis DSM 16511]
 gi|319419282|gb|ADV46392.1| exodeoxyribonuclease III [Nitratifractor salsuginis DSM 16511]
          Length = 258

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 74/301 (24%), Gaps = 75/301 (24%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
            VSWN+N                R+ +    L ++       I+ LQE+           
Sbjct: 7   FVSWNVNG--------------IRSVAKKGAL-KWVDKEPPHILGLQEVK--------AE 43

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           ++ +       R  +     S+    + +A+              +              
Sbjct: 44  EDQFPEDLFEHRYAHRYVSSSHKKGQSGVALFTDLEPEYYSPCYEVDILKEGRIN----- 98

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
                EI+  KI   +++  +    +              +  + L+          +  
Sbjct: 99  -----EIHFDKIAFFNVYFPNGKRNEERLAYKLEFYDRFFEHIEGLRK-------KGMSI 146

Query: 206 VIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +  GD N                   +L     +   +  +  +  F             
Sbjct: 147 IFCGDVNTAHRPIDLARPKENEGISGFLPVERAWIDKLIEHGYIDTFRYIHGDEPERYSW 206

Query: 251 LRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +           IDYF + ++  + ++                     SDH P+S+ 
Sbjct: 207 WSMRTKARERNVGWRIDYFFVSKDLKERILDADIL-----------AEIEGSDHAPVSLR 255

Query: 302 Y 302
            
Sbjct: 256 L 256


>gi|296420844|ref|XP_002839978.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636186|emb|CAZ84169.1| unnamed protein product [Tuber melanosporum]
          Length = 493

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 76/326 (23%), Gaps = 68/326 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYNAV 80
            +R+ + N   L         K   K   +    +           DIV LQE       
Sbjct: 15  SIRVFTMNCWGL---------KYIAKHREARLNEVSLRIARASPSFDIVALQEFW----- 60

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFS 138
                 +   +   T  ++ + K   +  I   + +  K          YPL G   +F 
Sbjct: 61  ---VYADYGNLRTKTSSILPYGKFYFSGAIGGGLVILSKWPIEQSSMFGYPLNGRPTAFW 117

Query: 139 RAGNRR----AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           R         A   +   +GK I + + HL +    +             + QA  +   
Sbjct: 118 RGDWYVGKGVACAAVRHPSGKTIDIFNTHLHAPYEKNDSY------LCHRTAQAWEIAKL 171

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------------------ 236
           +    +     +  GDFN   + L +       +  +  L                    
Sbjct: 172 LRGAVQKGHIAIGLGDFNMIPSSLAHRIISTHGLVSDSWLSANPTTPSITPPKTNAKTNI 231

Query: 237 ----FPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
                  +                         +DY                     +  
Sbjct: 232 EVLGATCDSVLNTWRMSTPTLPPPETEDPKGKRLDYIFHAPRYSSVQDIRIGMTEPMSMP 291

Query: 284 DIKSRGKR------LSDHCPISIDYD 303
             K           LSDH  + +   
Sbjct: 292 SQKGGKGGAGGYCSLSDHFSVEVTLS 317


>gi|125381322|gb|ABN41561.1| deoxyribonuclease I-like 2 [Gallus gallus]
          Length = 237

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 69/252 (27%), Gaps = 24/252 (9%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            ++    +    DIV +QE+   +  A            S+      S     ++     
Sbjct: 4   DVIINILRRY--DIVLVQEVRDSDLSAVTELLEQLNSVSSSPYDYEISGPLGRDNYKEMY 61

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSL 173
               +       S       +      +R    L V     K    + + L S     + 
Sbjct: 62  LFIYR---TDAVSVADTYQYEDPQDIFSREPFVLRVSAPHSKAEEFVMVPLHS-----AP 113

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
            +  +   +L       +  W           V  GDFN   +Y+  +D     +  +D 
Sbjct: 114 HDAVAEIDALYDVYLAVVNKW------GTDNIVFLGDFNADCSYVKQSDWASIRLRSSDV 167

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL 292
                 +         +       D  V+      + ++  S +   +       + + L
Sbjct: 168 FKWLIPDSADTTVGKSDCAY----DRIVVCGAKLKRSIVPNSATVYNFQRAFQLEQEEAL 223

Query: 293 --SDHCPISIDY 302
             SDH P+ +  
Sbjct: 224 AVSDHYPVEVKL 235


>gi|218245146|ref|YP_002370517.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8801]
 gi|218165624|gb|ACK64361.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8801]
          Length = 340

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 74/305 (24%), Gaps = 64/305 (20%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            L ++L          +R++++NIN                    ++  +    + +  D
Sbjct: 92  ILPWYLPHTQQGWGYSMRVMTFNIN----------------INNQEWDAIADAVRRVKPD 135

Query: 68  IVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           +  + E  + +  A+                                 + +  +   VL 
Sbjct: 136 VATIMESSVEAKEALRSRLANQL---------------PFVYRASGGGLTILSRFPLVLP 180

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           QS           +      V +        +  L           SL    +   + L+
Sbjct: 181 QS-----------KTFKNGTVLMTFLRVNHHLVHLIAAHPIVPIKPSLFQRRNGFLAELT 229

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              Q          E     +  GDFN              T   N  L    +      
Sbjct: 230 GYVQQQLAQDPIATELKKSLIFLGDFNLTPWSPYYGRLIRATGLHNTRLGFGIEPSWIEA 289

Query: 246 NANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             + +    +      PID+ ++  +                  D K+     SDH  + 
Sbjct: 290 ATHVHYPGWMTAIMKIPIDHILVSSDM--------------KVADCKTAQAANSDHRILW 335

Query: 300 IDYDF 304
            D  F
Sbjct: 336 SDLVF 340


>gi|322699854|gb|EFY91612.1| exonuclease III [Metarhizium acridum CQMa 102]
          Length = 603

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 77/325 (23%), Gaps = 77/325 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +S+ + +R++S+N+     Q                     ++  + + DIV  QE 
Sbjct: 317 PAGSSLVENLRVLSFNLWHGGTQVSNYH------------EKQVRFLADKNVDIVGFQES 364

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +   ++     W                  +     +++  +       S   +   
Sbjct: 365 TGGHG-TRLAHAFGW-----------------YSWQGPDVSIISRYPITQVYSATSVSGS 406

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY---------SPSCSLLS 185
                      V + ++     I V + HL    +                   S S  +
Sbjct: 407 -----------VRISLDGADGDIIVWNAHLGYDPYGPYDFCFDKMSVGRVMERESQSGRT 455

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWK----------------- 226
            Q Q +   +         VP ++ GDFN   +         +                 
Sbjct: 456 PQIQEITKKMGDHLSNAENVPVLLLGDFNAPSHLDWTEASKNQHCGIGQVAWPTSKYPTD 515

Query: 227 --TIDPNDSLIRFPKEKDSRCNANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEI 278
              ID        P        +               ID+             E+    
Sbjct: 516 AGLIDSFRVAHSDPVATPGITWSPIYLDNNGRPEPLDRIDFVYHKGRKLTVRDSEAVVVG 575

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
               +      +  SDH  +   Y 
Sbjct: 576 NPTAEPNHGNNEWTSDHKAVLTTYS 600


>gi|256786710|ref|ZP_05525141.1| integral membrane protein [Streptomyces lividans TK24]
 gi|289770605|ref|ZP_06529983.1| integral membrane protein [Streptomyces lividans TK24]
 gi|289700804|gb|EFD68233.1| integral membrane protein [Streptomyces lividans TK24]
          Length = 338

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 71/291 (24%), Gaps = 70/291 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P    VA+ VR+++ N+      +                  L    +    D+VF+QE 
Sbjct: 110 PTGPPVAE-VRVLTSNVEFGQGTD-----------------ALIAAVRREKPDLVFVQEC 151

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                 A+ +                    +R    D      +          + P   
Sbjct: 152 ERTCGAALRRDLAA------------GYPHRRAVEGDGSKGSVILSAFPLRAAPAVP--- 196

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                   G       + ++ G  + +   H                      ++   L+
Sbjct: 197 --------GTLGMPAAVADVRGHPVRLRLAHPMPPLAD---------RVDRWREELAALR 239

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           D      +   P V+AGDFN   ++          +     L    +             
Sbjct: 240 D--AAAGDRGTPTVLAGDFNASQDHAAFRRILDTGLRDAARLAGQDRTPSWPARTL--PV 295

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ID+ ++  +                  D +      +DH  + +D  
Sbjct: 296 FGTQIDHVLVSGDFAAR--------------DARFLDLAGTDHRALVVDLT 332


>gi|147826870|emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]
          Length = 2009

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 77/286 (26%), Gaps = 65/286 (22%)

Query: 24   VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++LVSWN+   ++               S   +++   ++  AD+V +QE    N    V
Sbjct: 923  LKLVSWNVRGANDS--------------SKRKVIKAMIRSQXADLVCIQETKIQNMTEGV 968

Query: 84   FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    F     +               I V      +      +             
Sbjct: 969  VRSIGSGRFLDWGAMGAQGSAG-------GILVCWDKRSLELLELEVGIYS--------- 1012

Query: 144  RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              +   ++     +  +   +   C              LL ++   ++           
Sbjct: 1013 --ISCKLKTVENDVVWVFTGVYGPC--------NRKERELLWEELGAIRGIW------DE 1056

Query: 204  PFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
            P+ I GDFN  ++    +           F + +D    +    +      +  +N +  
Sbjct: 1057 PWCIGGDFNVTLSQRDRSRQGSXSGAMRRFAQVVDDLALIDLPLQGGVYSWSGGRNNQXW 1116

Query: 255  IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +D F++ Q             +              SDH PI +
Sbjct: 1117 ARLDRFLVSQGWLDIFRGAVQCRLPRPT----------SDHFPILL 1152


>gi|76787484|ref|YP_330513.1| hypothetical protein SAK_1919 [Streptococcus agalactiae A909]
 gi|77405063|ref|ZP_00782163.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae H36B]
 gi|76562541|gb|ABA45125.1| RgfB protein [Streptococcus agalactiae A909]
 gi|77176357|gb|EAO79126.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae H36B]
          Length = 276

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 74/279 (26%), Gaps = 54/279 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST---------------- 95
                L ++      DI+ LQE+    +         +     T                
Sbjct: 24  KKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYL 83

Query: 96  ------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+       L+ +  L+ A D  +    RRA+   
Sbjct: 84  NLQGLHYHWTWAYNHIGYSKYHEGVAILSLKP--LKPNDILVSAVDDETDYHTRRALVAE 141

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             +N K + V+ +HL  F                    A+  K   T   E   P ++ G
Sbjct: 142 TTLNDKVVTVVSLHLSWFEKG----------------FAEEWKRLETTLLEVETPLLLMG 185

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        +   DS                 +  +  +  + +D+    +
Sbjct: 186 DFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSE 245

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +      Q  F                +SDH  + I  +
Sbjct: 246 DLSISSSQVVFEGGEAPV---------VSDHYGLEITLN 275


>gi|121704746|ref|XP_001270636.1| ap endonuclease [Aspergillus clavatus NRRL 1]
 gi|119398782|gb|EAW09210.1| ap endonuclease [Aspergillus clavatus NRRL 1]
          Length = 620

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/315 (11%), Positives = 69/315 (21%), Gaps = 73/315 (23%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSK 103
             R    +  +    +   ADIV  QE  +   +    +     W  ++S  +    +S 
Sbjct: 10  PWRGNRTFEYMFDILE---ADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPKAKKGYSG 66

Query: 104 RDSNNDIHTAIAVR----------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL--LVE 151
                   T   +R            N  V  +  P       +        +E   ++ 
Sbjct: 67  VAIYTRNATCCPIRAEEGLTGLLCPPNSSVSFRELPEDQQIGGYPTLEQLSELETDPVIL 126

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
            +  +  +L+        + S  N      S        +   I           + GD 
Sbjct: 127 DSEGRCVILEFPAFVLLGIYSPANRDESRDSFRHNFIDLMDTRIRNLVAMGKRVFVTGDI 186

Query: 212 NRKIN----------------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC---- 245
           N                                 F + +     L    + ++       
Sbjct: 187 NIARGEIDAAHATEAIRKGTATEDEFVSTPARRVFNQLLSDGKVLGARDEGREEPALFDI 246

Query: 246 ---------NANKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                                        IDY +   N   +    +             
Sbjct: 247 CRSFHPERRGMYTCWEQRINARPGNYGSRIDYVLCSLNTQDWFCDSNIQ----------- 295

Query: 288 RGKRLSDHCPISIDY 302
            G   SDHCP+   +
Sbjct: 296 EGLMGSDHCPVYAVF 310


>gi|257879024|ref|ZP_05658677.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,230,933]
 gi|257890876|ref|ZP_05670529.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,231,410]
 gi|257813252|gb|EEV42010.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,230,933]
 gi|257827236|gb|EEV53862.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,231,410]
          Length = 274

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 74/282 (26%), Gaps = 53/282 (18%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI------------------- 91
                 L       D +++ LQE+       +V P                         
Sbjct: 14  EKKLQELADKILLEDYEVIALQEINQLLESEEVEPAKLMKFCPVKNQVPIRKDNFAYRLV 73

Query: 92  -----FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                                +      A+  K    L+     +           R+ +
Sbjct: 74  QLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKK--TLESQVLTVSQFQKKEDYQTRKIL 131

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
               +I+ + I+V   H   +    S              + + L+++     E+ VP  
Sbjct: 132 IGKTKIDDQDIFVSSCHFSWWTDKKSGFY----------FEWKNLENY---FLETRVPLF 178

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFV 261
             GDFN  ++  G        +   DS +   ++  +       +  +    K+ ID+  
Sbjct: 179 FLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEKLRIDFIF 238

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +          E      Y           +SDH  + I+ D
Sbjct: 239 V---------PEGMQVKKYQRIFDGIDSPIISDHYGVEIELD 271


>gi|271969028|ref|YP_003343224.1| metal-dependent hydrolase-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270512203|gb|ACZ90481.1| Metal-dependent hydrolase-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 313

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/291 (12%), Positives = 63/291 (21%), Gaps = 72/291 (24%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
                 +R++S N+                       T L    + L  D++ LQE+   
Sbjct: 84  TPSGPALRILSSNLEVGGVPP----------------TALVDLVRRLRPDVLALQELTPS 127

Query: 78  NA---VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            A                       + S   + + I    A+                  
Sbjct: 128 AAEGLRKAGLATLLPYKAELALEGPSGSGVYARHAITPGQAIEYGF-------------- 173

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                      +   VE+ G     +          +S           L   A  L   
Sbjct: 174 ---------GQMVATVEVPGAGPVGIVSVHPCAPSDESG----------LPCWADGLAAL 214

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                      V+AGDFN  +++    D                          +     
Sbjct: 215 PR---PGGAVQVLAGDFNATLDHARIRDLLDAGYRDAADATGDGLTTTWPFRPRRFNGFG 271

Query: 255 IP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           IP   ID+ + D+               +    +        DH  +  + 
Sbjct: 272 IPTVTIDHILADRR---------VGVRSFGVHRLPDT-----DHRAVFAEL 308


>gi|285017908|ref|YP_003375619.1| hypothetical protein XALc_1117 [Xanthomonas albilineans GPE PC73]
 gi|283473126|emb|CBA15632.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 971

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 76/281 (27%), Gaps = 39/281 (13%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +P TA+    + +V+ N+                +        +    + L  D + L++
Sbjct: 1   MPATATDTPTLSVVTLNL------------SQHRQDWPQRRDQIADTLRALRPDAIVLED 48

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           M   +A+        W      E     S    + +     A+  ++  + ++   L   
Sbjct: 49  MPQDDALPDQA---QWLAAQLGEPWDVASIDSPSANRRHDNALLTRHPVLSREQIHLNPR 105

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
               +    R  V   V      + +    L                 +    + Q L  
Sbjct: 106 DSDSNATRLRLEVSARV------VNLYTAPLHL----------NRADGTRNQHELQDLLA 149

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           WI        P ++A DF    +  G      +  D N++ +     +      N     
Sbjct: 150 WIA-HSADGAPSLLASDFKAGTDAAGL-AALRRDFDDNNANLDGHGNRRPGNALNSKRSR 207

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             P+      +  +  +   S  +           G   SD
Sbjct: 208 PEPVSRLFFQRERFVPVASRSLLQTT------NRHGASASD 242


>gi|19074386|ref|NP_585892.1| CLASS II (DNA LYASE) APURINIC APYRIMIDIC ENDONUCLEASE
           [Encephalitozoon cuniculi GB-M1]
 gi|19069028|emb|CAD25496.1| CLASS II (DNA LYASE) APURINIC APYRIMIDIC ENDONUCLEASE
           [Encephalitozoon cuniculi GB-M1]
          Length = 338

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/339 (12%), Positives = 84/339 (24%), Gaps = 59/339 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           MI+  +      L  C      ++R+ S+N+N +       + K+   R       +   
Sbjct: 1   MIKSMIFICPLILCSC------RMRITSFNVNGIR-SFSKYVMKSCRLRFNEYVKNI--- 50

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117
              L ADI+ +QE          F      I ++     N S+   +  +   +  R   
Sbjct: 51  ---LRADILCVQETRGREGALGEFHSLRDYITFTNTNKTNSSRSGVSTMVSKKLYCRGVL 107

Query: 118 --------------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL--LVEINGKKIWVLD 161
                             +VL   +P         ++      +           I +  
Sbjct: 108 DSPFAEDGRSLLTDHGEFKVLNLYFPFFDESSERDKSEVIGFYDAIGEFIRGHDNIIMCG 167

Query: 162 IHLK------SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD--FNR 213
                      + F   L          L + A+  +          +P+    +     
Sbjct: 168 DFNAVYSIIDHYQFYSELLRIQRKDRPGLEEGAKERRRARKSPTRLELPYEFYAEDALES 227

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN--------LRNKIPIDYFVMDQN 265
            +            ID  + +  +        +                  IDY ++   
Sbjct: 228 YLLETEQRKWLRSLIDGGEYIDAYRALCKRPESYTCWNTMLNLRPRNLGTRIDYILIPAR 287

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               L                      SDHCP+  + DF
Sbjct: 288 FLNRLKDCDIQ-----------PEIHGSDHCPVYAEIDF 315


>gi|296081966|emb|CBI20971.3| unnamed protein product [Vitis vinifera]
          Length = 786

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 67/229 (29%), Gaps = 12/229 (5%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIV 69
              +S  ++  ++S+NI  + L+  +   L+ +  +           +        AD++
Sbjct: 155 AGPSSHCERFTVLSYNILADYLAVNQRSRLYFHIPRHMLDWEWRKRNIIFELGLWSADVM 214

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             QE+  +  + +      +   +                     A R K +      + 
Sbjct: 215 CFQEVDRFGDLEEELKLRGYTGIWKMRTGDPVDGCAIFWR-----ASRFKLLHEECIEFN 269

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            LG +D+ ++     ++      +   +             +           +   Q +
Sbjct: 270 KLGLRDNVAQICVLESINQNYSWSTSALPASSTGSNKVVICNIHVLYNPRRGEIKLGQVR 329

Query: 190 WLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            L D      +  +  P VI GDFN        N    + +D +     
Sbjct: 330 ALLDKAHAVSKIWNDAPIVICGDFNCTPKSPLYNFISEQKLDLSGLDRD 378


>gi|10640846|emb|CAC12624.1| probable apurinic/apyrimidinic endonuclease [Thermoplasma
           acidophilum]
          Length = 241

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 70/269 (26%), Gaps = 64/269 (23%)

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               K  D   + LQE  + +      P+  + + Y         K  S           
Sbjct: 13  VSVFKQDDYFGIALQETKADST---SVPEEMYHLGYYLYNNPAKKKGYSGTMSLV----- 64

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                        +     F     R      + +   K + ++++  +     +  +  
Sbjct: 65  ---------REKPIDVSYGFENEEGRI-----LNLEFDKFYFINVYFPNAQHGLTRLDMK 110

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NN 221
                   + +  L+           P +I GDFN     +                   
Sbjct: 111 LDFDEKFLEYSNELRK--------KKPLIICGDFNVAHEEIDIARPKDNENNAGFTKQER 162

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQES 274
           D   K +D           K+    +  + R           IDYFV+  +    + +  
Sbjct: 163 DWMTKFLDSGYVDTYRIFMKEGGHYSWWSYRFNARAKNIGWRIDYFVVSDDIRDRVKKAE 222

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             E +             SDH P++++ D
Sbjct: 223 ILETVT-----------GSDHAPVTLEVD 240


>gi|257464350|ref|ZP_05628728.1| hypothetical protein FuD12_10992 [Fusobacterium sp. D12]
          Length = 217

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 52/206 (25%), Gaps = 25/206 (12%)

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
           H+  ++  +       +K  V++++Q                R       +I       +
Sbjct: 28  HAVGENGYNEFYGYVWKKDKVKLIKQEGFYPDP----DNKFVREPYGATFKIGNFDFTFV 83

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL---VPFVIAGDFNRKINY 217
             H                       +A  L       ++        +IAGDFN     
Sbjct: 84  LQHAVYG-----------KKVLERKLEAAELVKVYDYFQDRDIKENDILIAGDFNLS-AS 131

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
               D  +   D     +    +                 D   + +        +S   
Sbjct: 132 DKAFDSLYNHRDNITCTLDPKTKTTVGTKGLS-----SAYDNIFISKKYTTEYTGKSGIV 186

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
             +         K++SDH PI I+ +
Sbjct: 187 D-FTNKKYGEARKKISDHLPIYIEVN 211


>gi|145349696|ref|XP_001419264.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579495|gb|ABO97557.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 249

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 58/170 (34%), Gaps = 28/170 (16%)

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               + ++G+ + V+  HLK+     S       SC+    Q + L+     + ++    
Sbjct: 55  FWTRISVSGRYVSVIGAHLKANPTQPS-------SCAQREAQVEVLRAIAQARYDAGDAV 107

Query: 206 VIAGDFNRKIN---YLGNNDDFWKTIDPNDSLIRF---------PKEKDSRCNANKNLRN 253
           ++AGD N   +     GNN    K +                   +         ++  +
Sbjct: 108 IVAGDLNDYSDRHVDAGNNSPTSKVLKRLRDFNDDGVDELEEVGGRIAQVSRYTWQSGSS 167

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           K  +DY +  +   + +      +++ +          +SDH P+    D
Sbjct: 168 KAKLDYILTSRADIEVVSAAIRHDLVTSS---------VSDHFPLVATLD 208


>gi|293339922|ref|XP_002724702.1| PREDICTED: rCG35247-like isoform 1 [Rattus norvegicus]
 gi|293351342|ref|XP_002727797.1| PREDICTED: rCG35247-like isoform 2 [Rattus norvegicus]
 gi|149052010|gb|EDM03827.1| rCG35247, isoform CRA_b [Rattus norvegicus]
          Length = 332

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 76/270 (28%), Gaps = 33/270 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A  +R+ ++N+ +  + +       SV         + Q       DI  +QE+   +  
Sbjct: 81  ATALRIGAFNVQSFGDHKASDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 129

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           AV+ +  +      +    + +                RK  V V   +Y     +D   
Sbjct: 130 AVSLLMEQINSVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVVSV-VSTYQYPDPED--- 185

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A +R    +     G         L       +     +   +L       +  W    
Sbjct: 186 -AFSREPFVVKFSAPG----CAAKELVLIPLHAAPNQAVAEIDALYDVYLDVIDKW---- 236

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    +  GDFN    Y+  +D     +  +        +       N +       D
Sbjct: 237 --NTDDMLFLGDFNADCKYVKAHDWPSIRLRSSQVFKWLIPDSADTTVGNSDCAY----D 290

Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKS 287
             V+      K +  +S S   + E+    
Sbjct: 291 RIVVSGAHMRKSVKPQSASVHNFQEEFDLD 320


>gi|330939748|ref|XP_003305882.1| hypothetical protein PTT_18837 [Pyrenophora teres f. teres 0-1]
 gi|311316921|gb|EFQ86022.1| hypothetical protein PTT_18837 [Pyrenophora teres f. teres 0-1]
          Length = 756

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 98/359 (27%), Gaps = 76/359 (21%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG- 75
           S  + V  +S+NI  +    Q       +S     S   L+    +  DADIV LQE+  
Sbjct: 375 SAQETVSALSYNILCDKYCTQSQYGYTPSSALAWESRRELILAELRERDADIVCLQEIDQ 434

Query: 76  ---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL- 131
              +    A +   +   +F+   R    ++R++      AI  +     +L +      
Sbjct: 435 DSFNEFFRAALAHNDYKGVFWPKSRARTMAEREAKLVDGCAIFYKNSKYILLDKQLIDFA 494

Query: 132 ----------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTY 177
                     G  D F+R   R  + ++        G +  V ++H+        ++   
Sbjct: 495 NTAINRPDMKGEHDIFNRVMPRDDIGVVAFLENRATGSRFIVGNVHVFWNPAFTDVKLVQ 554

Query: 178 ----SPSCSLLSQQA--------QWLKDWITQKKESLV--------------------PF 205
                   + L+ Q         + +  +     E                       P 
Sbjct: 555 VAILMEGITKLATQWTKTAPCTNKVVYQFTNGDSEEGTELDPTQEPGPSKQYSDPADFPV 614

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-------------------- 245
           ++ GDFN      G  D        N       ++  +                      
Sbjct: 615 ILCGDFNSLPTS-GVYDLITHGNVSNVHADLGTRKYGNFTRDGISHPFSLKSSYASIGEL 673

Query: 246 -NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDY 302
              N     +  +DY     N  + +      +  Y             SDH  +   Y
Sbjct: 674 AFTNYVPHFQGVLDYIWYSTNTLQVVGLLGDIDKGYLKRVPGFPNYHFPSDHVALYAQY 732


>gi|225431035|ref|XP_002273445.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 701

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 72/287 (25%), Gaps = 65/287 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++LVSWN+   ++               S   +++   ++  AD+V +QE         
Sbjct: 74  KIKLVSWNVRGANDS--------------SKRKVIKAMIRSQRADLVCIQETKIQTMTEG 119

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V        F     +               I V      +      +     S      
Sbjct: 120 VVRSLGSGRFLDWGAMGAQGSAG-------GILVCWDKRSLELLEMEVGNYSISCRLKNV 172

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V                                    +L ++   ++          
Sbjct: 173 ENEVVWTFTGVYGPC-------------------NRKEREMLWEELGAIRGIW------D 207

Query: 203 VPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            P+ I GDFN  ++    +           F + +D    +    +      +  +N + 
Sbjct: 208 EPWCIGGDFNVTLSQRDRSRQGSLNGAMRRFAQVVDDLALIDLPLQGGVYSWSGGRNNQT 267

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +D F++ Q             +              SDH PI +
Sbjct: 268 WARLDRFLVSQGWLDIFRGAVQCRLPRPT----------SDHFPILL 304


>gi|114566736|ref|YP_753890.1| DNA-(apurinic or apyrimidinic site) lyase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114337671|gb|ABI68519.1| DNA-(apurinic or apyrimidinic site) lyase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 237

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 69/268 (25%), Gaps = 64/268 (23%)

Query: 59  QYAKNLDADIVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           Q+ K    D++ LQE  +        +     +   +++     +          + +A 
Sbjct: 5   QWLKEEQPDVLCLQETKAHPEQLEESLVNIKGYQSCWNSGERRGY----------SGVAC 54

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +   +  +    +   D   R         ++    + + +L+++  +    +     
Sbjct: 55  YFQKEPLQVEKNLGVEEFDREGR---------VLISFHENLVLLNVYFPNGQMGEERLAY 105

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNN 221
                  L    + LK             VI GDFN                    L   
Sbjct: 106 KLRFYEYLINFCEELKKRY-------PRLVICGDFNTAHREIDLKNPKANEGRSGFLPIE 158

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
            +          +  F      +         +           ID F + +     +I 
Sbjct: 159 REMLDRFLSYGYVDAFRYLYPEKV-QYSWWSYRTRARERNAGWRIDCFYVSEKLLDDIID 217

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISI 300
               + +             SDHCPI++
Sbjct: 218 CEVLDHIP-----------GSDHCPIAL 234


>gi|78049782|ref|YP_365957.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038212|emb|CAJ25957.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 434

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 72/306 (23%), Gaps = 40/306 (13%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L    V    S    + ++++N+  L E         +                    
Sbjct: 15  LTLACAGVAHAQSSVGVLDVLTYNVAGLPEGISSGNPATNTPLLAPKLAPYA-------- 66

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
            +V +QE  +Y+A       + +    S               I   +            
Sbjct: 67  -LVHVQEDFNYHAALYAGDNHPYRTPTSG-----------GAAIGDGLNTLSNYPFNDFT 114

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                    +        +   L   NG  + V + H  +           +   +    
Sbjct: 115 RVTWDKCNGTDCLTPKGFSYMQLRLDNGVLLDVYNAHPNAGT--------ETADLAARRA 166

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTIDPNDSLIRFP 238
               L  +I     +    ++  D N +             +N+     ++         
Sbjct: 167 NISQLSQFIGTW-SAGNAVLVMMDSNTRYTRSDDNIRELIASNNLIDPWVELIKGTAPAA 225

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 C           +D  +        L    +        D  S GK LSDH P+
Sbjct: 226 GAAPLLCGTPPT-NTCEVVDKILYRAAPQLTLAANRYQLDPGGFYD--SAGKPLSDHYPL 282

Query: 299 SIDYDF 304
              + +
Sbjct: 283 YTQFGW 288


>gi|297570818|ref|YP_003696592.1| endonuclease/exonuclease/phosphatase [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296931165|gb|ADH91973.1| Endonuclease/exonuclease/phosphatase [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 256

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 78/292 (26%), Gaps = 53/292 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            VR V++N+              S          L Q  +++DA +V +QE     A   
Sbjct: 3   TVRCVTFNLEHGRPAREGIDDYFS--------RALAQ-LRDVDAGVVLVQEAD--GAARD 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG---------- 132
               +     +     +  +   + +     + V  +   V  +   L            
Sbjct: 52  WVTHSGGGHVHDIASFLGMNWVYAPSAFGYGVGVLSRFPIVAARYLRLPPVVRPVYRKPN 111

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            K        R A+  L++     + V   HL         +     +   L   A    
Sbjct: 112 GKIHVRWPEPRVALYALLDSGSHPLIVGTTHL---------DIDQQAAPHQLRITATGFS 162

Query: 193 DWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
                     S   F++ GD N +       D     +      I  P+   +      +
Sbjct: 163 RVADHWGIDSSSSSFLLTGDLNMRP------DAVESALAEVPVGIAAPRNVLATGLTYPH 216

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +  ID+ +             +       + + +    +SDH  +  D 
Sbjct: 217 NEPRWQIDHVL------------GYRINAIYSEVLSTS---ISDHAGLVADI 253


>gi|168486747|ref|ZP_02711255.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1087-00]
 gi|168490847|ref|ZP_02714990.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC0288-04]
 gi|183570235|gb|EDT90763.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1087-00]
 gi|183574548|gb|EDT95076.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC0288-04]
          Length = 271

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 77/281 (27%), Gaps = 54/281 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
              + +L +     D +++  QE+      ++V   + +    +                
Sbjct: 17  EEKFQILLEDILEKDYNLICFQEINQEMTSSEVEVNDLYQALPAAESIHQDHYVRLLVEK 76

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +  H  +A+  K     ++   L+   D  +    RR    
Sbjct: 77  LLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALA 134

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              ++GK++ V  +HL  +      E     +                       P ++A
Sbjct: 135 ETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLA 178

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMD 263
           GDFN      G        +   D+     ++  S     +    K       IDY    
Sbjct: 179 GDFNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTT 238

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                +     ++  ++SDH  ++   ++
Sbjct: 239 KELA---------VENLHVVFDGNKSPQVSDHYGLNAMLNW 270


>gi|153812188|ref|ZP_01964856.1| hypothetical protein RUMOBE_02585 [Ruminococcus obeum ATCC 29174]
 gi|149831843|gb|EDM86929.1| hypothetical protein RUMOBE_02585 [Ruminococcus obeum ATCC 29174]
          Length = 281

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/299 (10%), Positives = 89/299 (29%), Gaps = 55/299 (18%)

Query: 37  QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN--------T 88
             G   W  S            +   + D D   ++E+   +  +    +          
Sbjct: 2   DGGKFSWAKSKDSVLKTVQGAGELVASYDPDFALIEEVDLNSTRSYHVNEYTILKECLAD 61

Query: 89  WCIFYSTERLIN---HSKRDSNNDIHTAIAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNR 143
           +   ++         +     +    + +A+  +        + +P+  +   F      
Sbjct: 62  YDTVFAQNYDSAFLFYPFTQPHGKSRSGLALFSRYPVTDSLRRRFPVSTSFSKFFDLDRC 121

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            ++  +   NGK+  + ++H+ ++   D+          +   Q + L + + ++ E+  
Sbjct: 122 YSISRVPVDNGKEFVIFELHMSAYGNSDA----------IREGQIRMLAEDMQKEYEAGN 171

Query: 204 PFVIAGDFNRKI-----NYLGNNDDFW---------------KTIDPNDSLIRFPKEKDS 243
             +  GDFN  +     +        +                 +   +    +   +++
Sbjct: 172 YVLCGGDFNHDLKAAEDDSADKESWAYPFPREELQEHFAFCIDQLTAQEKNDLWDSARNA 231

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +   + +D F++  N            I     +  + G   SDH P+ + +
Sbjct: 232 DMEYVPGVTYTVTLDGFIISDN------------IECVSYEDINTGYSYSDHDPVYLKF 278


>gi|149917739|ref|ZP_01906235.1| hypothetical protein PPSIR1_28463 [Plesiocystis pacifica SIR-1]
 gi|149821521|gb|EDM80921.1| hypothetical protein PPSIR1_28463 [Plesiocystis pacifica SIR-1]
          Length = 250

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 84/293 (28%), Gaps = 56/293 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A     +RLV+WN+                 R       L +    L  D+V LQEM   
Sbjct: 3   AMSPAALRLVTWNVWFG------------DWRHADRQGALWRTLDGLTPDLVCLQEMT-- 48

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                          +        S+        +  ++   +V +  +  PL   + + 
Sbjct: 49  ---------------FDHLFGPGVSRWRERGGWISDESIAHYDVIMGARRRPLEHWRVAL 93

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  +   +++    + +  +HL+S                   +Q + +   +  
Sbjct: 94  PTQMGRSLLVARLDV-DPPLTLATVHLESTS----------AMEKARMRQLERIHAALAD 142

Query: 198 KKESLVPFVIAGDFNRKINYL--------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +       V  GD N   +              D W  + P++       E+++      
Sbjct: 143 EPN----VVFVGDMNFSPDGPAQALFESWEGWTDAWAQLRPDEPGYSVDAERNAMRGLKD 198

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               +  ID   +   A  + +     E+L  +         +SDH  +  + 
Sbjct: 199 AKGKRARIDRVFVR--ARDWEVSSI--ELLGTQALPDDPLTFISDHFGLLAEL 247


>gi|114800068|ref|YP_759642.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
           neptunium ATCC 15444]
 gi|114740242|gb|ABI78367.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
           neptunium ATCC 15444]
          Length = 455

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 78/313 (24%), Gaps = 51/313 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKV- 83
           + +WNI                 R       + +       D+  LQE+      +  V 
Sbjct: 51  IGTWNIRDFDNN-----KFRHGPRRRESLHYIAEVLSAF--DVCALQEVNEDLGPLKDVI 103

Query: 84  -FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD---SFSR 139
                 W    +           S N          + VR       ++  K       +
Sbjct: 104 RLMGPGWDFIATDVTTG-----ASGNRERMCFVYDSRKVRFRNIVGEIVLPKHALLPGEQ 158

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-KDWITQK 198
              R    +  +    K  +  +H+          +  S   +    +  ++ ++   + 
Sbjct: 159 QFARTPFMVSFQAGWFKFSLCTVHIYFG-----ETSKGSDGYARRVSEIDYIAREMADRA 213

Query: 199 KESLVPFVIAGDFNR------------------KINYLGNNDDFWKTIDPNDSLIRFPKE 240
           +     +++ GDFN                         +N       D         + 
Sbjct: 214 ERENENYILLGDFNIKNPVDETMSALTKAGFQLPPEQYPSNLLGTHYYDQIAFRTLKDEL 273

Query: 241 KDSRCNANKNLRNKIPIDYF-----VMDQNAYKFLIQESFSEILYNEDDIKSRG--KRLS 293
                      +     D++     V+              +   +++    R    ++S
Sbjct: 274 TFLSSGVFDWSQTVFHADHYEHYAPVLPARHRDLKPDGRPRDTGKDKEYYSKRWLTWQMS 333

Query: 294 DHCPISIDY--DF 304
           DH P+ ++   DF
Sbjct: 334 DHLPLWVELAIDF 346


>gi|293378601|ref|ZP_06624761.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium PC4.1]
 gi|292642732|gb|EFF60882.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium PC4.1]
          Length = 276

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/310 (11%), Positives = 76/310 (24%), Gaps = 66/310 (21%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------- 75
           ++ ++ N +  L  +                   L +     D +++ LQE+        
Sbjct: 1   MKFMTLNTHSWLEPEP------------EKKLQELAEKILLEDYEVIALQEINQLLESEE 48

Query: 76  -SYNAVAKVFPKNTWCIFYST----------------ERLINHSKRDSNNDIHTAIAVRK 118
                + K  P                                      +      A+  
Sbjct: 49  ADPPKLTKFCPVENQVPIRKDNFAYCLVQLLKEQGKEYFWSWEMSHIGYDKYEEGNALLT 108

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K    L+     +           R+ +    +I+ + I+V   H   +    S      
Sbjct: 109 KRP--LESQVLTVSESQKKEDYRTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEW 166

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            +      + +              P    GDFN   +  G +      +   DS +   
Sbjct: 167 KNLENYFFETRA-------------PLFFLGDFNNPADSEGYHIVKESGLLLQDSYVIAN 213

Query: 239 KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           ++  +       +  +    K+ ID+  +          E      Y           +S
Sbjct: 214 EKGKAATVEKKIDGWEQNTEKLRIDFIFV---------PEGVQVKKYQRIFDGIDSPIIS 264

Query: 294 DHCPISIDYD 303
           DH    I+ D
Sbjct: 265 DHYGAEIEID 274


>gi|47205662|emb|CAF99515.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 481

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 66/257 (25%), Gaps = 19/257 (7%)

Query: 15  PCTASVAQKVRLVSWNI---NTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           P  +S A    ++S+NI     L +           V         L    +  DADI+ 
Sbjct: 148 PPWSSAAFDFSVMSYNILSQELLQDNAYLYRHCDPGVLPWDHRLPNLLAEIRQHDADILC 207

Query: 71  LQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           LQE+      N +        +   Y                      +         + 
Sbjct: 208 LQEVQEDHYENQIKPALLTLGYQCEYKKRTGSKPDGCAIVFKSSRLSLLSSN-PVEFLRP 266

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
              L  +D+       +  +    +    I V + HL                 + L+  
Sbjct: 267 GDALLDRDNVGLVLLLQPSDAASPLGASSICVANTHLLYNP------RRGDVKLAQLAIL 320

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              +         S  P V+ GDFN        +      ++ +   +     ++S    
Sbjct: 321 LAEISRLSRLPGGSTGPVVLCGDFNSTPLSPLYSFLTTGCLNYSGLKMGSVSGQESSPRG 380

Query: 248 N-----KNLRNKIPIDY 259
                       + ID+
Sbjct: 381 QRLLPCPIWSPSLGIDH 397


>gi|291235993|ref|XP_002737925.1| PREDICTED: GK17015-like [Saccoglossus kowalevskii]
          Length = 660

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 83/292 (28%), Gaps = 32/292 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYNA 79
           + ++S+N+  +    G    +  V R  +         ++ + D++  QE+      Y  
Sbjct: 200 LSVISYNVYEIPYPVGQFGQRERVCRIPNRLFE-----EHPEVDVIIFQEVFLGGCGYEF 254

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +        F  T   +           +  I +  K   + + S        S   
Sbjct: 255 GVSLRDLLAANGFLYTTATVGDPPELYLRPYNGGIFIASKWQILSENSTVFSPVGPSDDI 314

Query: 140 AGNRRAVELLVEINGKK----IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              +      +E + +       +   HL+     ++          +   Q Q +  +I
Sbjct: 315 YLAKGVAYATIEKSFQGRSKVYHIFGTHLQYTPLGEAHTMFD----VMRVLQVQEMAQFI 370

Query: 196 -TQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSL---IRFPKEKDSRCNAN 248
             Q      P ++ GDFN       Y  + D+ ++ +           +           
Sbjct: 371 VEQNIPKSEPVIVGGDFNADTYNNMYHEHRDEIFEILGARMPNIIGNWYTTYDSDLIPGI 430

Query: 249 KNLRNKIPIDYFVM--------DQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                +  IDY +           N   F +  +   I  ++     +  ++
Sbjct: 431 FVGAEREWIDYVLTLKDHQQPSSSNLRSFRLPGTGVFIDDDDHSELYKDSKI 482


>gi|294629015|ref|ZP_06707575.1| membrane protein [Streptomyces sp. e14]
 gi|292832348|gb|EFF90697.1| membrane protein [Streptomyces sp. e14]
          Length = 346

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 86/296 (29%), Gaps = 70/296 (23%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L   L+   ++    + + + N+N  +     +                 +      A
Sbjct: 108 LNLFGGLLFDKSAGGGDLMVATHNVNADNPDPSGT----------------AREVAASGA 151

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ L+E+ +                   E+ +  + R         +  +         
Sbjct: 152 DVLALEELKAS-------------AVPVYEKALAPTYRYHAVQGTVGLWSK--------- 189

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            YPL   K    R G  RA+   V      + V   H+ S      ++     + S   Q
Sbjct: 190 -YPLSSVKPVNIRLGWTRAMRATVATPEGAVAVYVAHMPSVR----VKMNAGFTASQRDQ 244

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            A  L + I  +       V+ GD N  +N         ++++   + +R  +       
Sbjct: 245 SADALGEAIADEALP--RVVLLGDLNGTMND--------RSLNAVTAQMRSTQGAVGNGF 294

Query: 247 ANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       ID  ++       +  ES   +   +          SDH P++ 
Sbjct: 295 GFSWPASFPMARIDQIMVRG-----VEPESSWTLPRTD----------SDHLPVAA 335


>gi|333025252|ref|ZP_08453316.1| putative ATP/GTP-binding protein [Streptomyces sp. Tu6071]
 gi|332745104|gb|EGJ75545.1| putative ATP/GTP-binding protein [Streptomyces sp. Tu6071]
          Length = 627

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 78/298 (26%), Gaps = 25/298 (8%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNS-VKRTTSDYTLLRQYAKNLDADIVFLQEM-- 74
            +    + +VSWNI   +     +                L +     +AD V LQE   
Sbjct: 71  EAAPPDLTVVSWNICGEAGGGRGAAGYCPYRNEPERKTEELARLVVAENADAVVLQETCG 130

Query: 75  ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQS 127
                   ++ +         F   +R  + +   +      A A R      +     +
Sbjct: 131 GPDGAHEKSLREKLGAGWSFAFAPAKRPDDKNADGTPQGDPEASACRGSLAGGILGNLIA 190

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                  ++   A       + V+    +   +     S C    +     P       Q
Sbjct: 191 VRGTITAEAHENALPADPTGVSVQRLPVQCVAVAEWSTSVCDTHIIPGASDPRVPA---Q 247

Query: 188 AQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            Q ++ ++ +          V+ GDFNR        D   K +                 
Sbjct: 248 IQAVRAFVAEFGTAHGTARTVLGGDFNRAAA-----DATMKPLTS-AYENCVSGATHHGW 301

Query: 246 NANKNLRNKIPIDYFVMD----QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +       +   D+  +      +A+     ES        +         SDH P+ 
Sbjct: 302 DNAAKAHRRHEFDHLFVTRPAEGSAFSSCSVESALMDTTENEADSGDPNGFSDHAPVV 359


>gi|171317293|ref|ZP_02906490.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
 gi|171097554|gb|EDT42391.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
          Length = 271

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 81/310 (26%), Gaps = 68/310 (21%)

Query: 12  FLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +P     A   ++  VSWN++      G + W             +R + ++  AD+ 
Sbjct: 6   LSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWN-----------AMRDWMQSTHADVY 54

Query: 70  FLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           FLQE  +                 +AV  V+      I  + +  I              
Sbjct: 55  FLQEAMARRMPRPMLATGFGAPIDDAVDDVWHCQATEIAQALDWQIALGPNVFKPSWRHG 114

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+   +   L   + +        R   R  +     + G + + +L  HL        
Sbjct: 115 NAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGTRPVTLLCAHLALT----- 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                    +   +Q  W+  WI +      P V+AGDFN   N           +    
Sbjct: 165 --------RAARLRQMHWIAHWIVRNAGDD-PLVLAGDFNDWRNDSV-------ALFGEI 208

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                    + +D   +                             L
Sbjct: 209 GLSEVATLLGESGRTFPAFSPALALDKMFVRG------------LTPLEWQAPSGETAWL 256

Query: 293 SDHCPISIDY 302
           SDH P     
Sbjct: 257 SDHLPYIARL 266


>gi|301168095|emb|CBW27681.1| putative exported protein [Bacteriovorax marinus SJ]
          Length = 267

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 86/286 (30%), Gaps = 48/286 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
            V     + + N+   +                +    L     +  ADI+  QE     
Sbjct: 23  PVNASFTVSTQNLWHYTND------------YENRLKNLNDEYFSESADIMNFQEAWQSF 70

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +F        ++T     + + ++   I   +A   +   + + ++ L  +K    
Sbjct: 71  TGKSLFNTIVKKEEFNTH----YYRTNNTLIIKEGLATLSRFEILEKTAFELPHSKLFRK 126

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R      +  ++    K++++++IHL  F                   Q  ++   I   
Sbjct: 127 RTM---IITKILSPTKKELYMINIHLSPFTQGKVE----------RVDQLDYILKKIESD 173

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE--KDSRCNANKNLRNKIP 256
                P ++ GDFN+       +++F+  +         P      +  N   +      
Sbjct: 174 FS-DAPVILTGDFNQ-----EEDENFFTKLVDAGYSSTLPGICTYCANENEYVDSEYISK 227

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +DY    +  ++                     K +SDH  I  ++
Sbjct: 228 LDYIFYPKEVFQLQKARRTFV-----------EKPISDHFGIKAEF 262


>gi|114765835|ref|ZP_01444928.1| metal-dependent hydrolase [Pelagibaca bermudensis HTCC2601]
 gi|114541834|gb|EAU44871.1| metal-dependent hydrolase [Roseovarius sp. HTCC2601]
          Length = 223

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 76/281 (27%), Gaps = 61/281 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+NI            K        D   + +    +DAD V LQE          
Sbjct: 1   MKIASYNIR-----------KALGTDRRRDPARILKVLNQIDADAVLLQEADLRLGPRPT 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                     +   + + +  D +   H  AI +R+       +   L G          
Sbjct: 50  ALPRFLISQETDYEVADLAINDVSIGWHGNAILLRRGLEPARLERIDLPGL-------EP 102

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV   V   G  +    + L                     QQ   +++ +  ++   
Sbjct: 103 RGAVLAEV--GGVTLVGAHLGL---------------MRRYRLQQMTTIREHLKGRE--- 142

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +  +IAGDFN   +  G                    E      +    R  + +D    
Sbjct: 143 IRALIAGDFNEWSDVRGYEPWEKNF------------ELLLPGRSYHARRPFVALDGIAH 190

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +             I     +     +  SDH PI    +
Sbjct: 191 GRGLR----------IAEMGVESGGAARLASDHLPIWARIE 221


>gi|281207492|gb|EFA81675.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 526

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 79/322 (24%), Gaps = 47/322 (14%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEM 74
           TA      R++ +NI         +     V     +Y    L +Y      D+V LQE 
Sbjct: 198 TAMTNSSFRVMQFNILADCYTSPANYVGCPVYSLYRNYRQWVLPEYILEHSPDVVCLQEA 257

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + ++  K     +  T             +         +   +  Q       K
Sbjct: 258 EVR--MERLTKKLVEAGYLHTPLCDLARYE---EEQSITYFKTSRYQPIELQMVHYKNLK 312

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS--------- 185
           +  + A     ++  +    K + +L   +    F  +L      S S+L          
Sbjct: 313 NLLTPAQLDPLLKSSITA--KYLDLLSSSMHHNKFSLALLQDKQTSSSILFGSVHLHWGS 370

Query: 186 --------QQAQWLKDWI--------TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                    Q   L  ++                P VI GD+N            +   +
Sbjct: 371 PDFDINYIAQVIQLHIFMMVVGNLLDKHSLPRDTPLVICGDYNNGPTQKAYTLMDYGQYE 430

Query: 230 PNDSLI---------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
            N   +            +         +       ID   M +      + E       
Sbjct: 431 LNGYTLSHSFKMSSAYSHRPDGEPKYTIRTNHFTGSIDQIWMSEKLRVSKLLEIGDHYPR 490

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
               +       SDH  +  D 
Sbjct: 491 QLPSLTD----PSDHIMMLADL 508


>gi|167522982|ref|XP_001745828.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775629|gb|EDQ89252.1| predicted protein [Monosiga brevicollis MX1]
          Length = 384

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 82/291 (28%), Gaps = 51/291 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVF 84
           +V+WNIN L+E+ G+               ++      L   D++ LQEM +      + 
Sbjct: 120 VVTWNINGLTEEPGLLKP---------RLRMVAHELLQLRGLDVILLQEMTTTTVA--LL 168

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                  F               +      A+  +   +  Q    L      + A  R 
Sbjct: 169 QPLLQARFPHMR---------VGSTQPYFTAMYSRLPLLETQR---LAFDREATSAMCRN 216

Query: 145 AVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            +   +E   G ++ +L  HL+S               +    QAQ +++ + +     +
Sbjct: 217 LLMAEIEPQPGTRVRLLTSHLESL----------RQGATARVAQAQRVQEELAR--PDCL 264

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--------FPKEKDSRCNANKNLRNKI 255
             +  GD N ++          K     D            +  +       + +   ++
Sbjct: 265 WAIFGGDTNLRVAETKQLSTTAKQHGIKDLFDLAGCPKEARYTWDMQVNDTLHMDRGPRM 324

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDYDF 304
            +D                F    Y     +        SDH  I     +
Sbjct: 325 RLDQLWARPPPDD----AGFDVAHYALIGTRRSESFGFASDHFGIWTIIRY 371


>gi|170699632|ref|ZP_02890670.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
 gi|170135448|gb|EDT03738.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
          Length = 271

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 81/310 (26%), Gaps = 68/310 (21%)

Query: 12  FLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +P     A   ++  VSWN++      G + W             +R + ++  AD+ 
Sbjct: 6   LSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWN-----------AMRNWMQSTHADVY 54

Query: 70  FLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           FLQE  +                 +AV  V+      I  + +  I              
Sbjct: 55  FLQEAMARRMPRPMLATGFGAPIDDAVDDVWHCQATEIAQALDWQIALGPNVFKPSWRHG 114

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+   +   L   + +        R   R  +     + G + + +L  HL        
Sbjct: 115 NAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGARPVTLLCAHLALT----- 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                    +   +Q  W+  WI +      P V+AGDFN   N           +    
Sbjct: 165 --------RAARLRQMHWIAHWIVRNAGDG-PLVLAGDFNDWRNDSV-------ALFGEI 208

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +                    + +D   +                             L
Sbjct: 209 GMSEVATLLGQSGRTFPAFSPALALDKMFVRG------------LTPLEWQAPSGETAWL 256

Query: 293 SDHCPISIDY 302
           SDH P     
Sbjct: 257 SDHLPYIARL 266


>gi|305666477|ref|YP_003862764.1| putative exported phosphatase [Maribacter sp. HTCC2170]
 gi|88708744|gb|EAR00979.1| putative exported phosphatase [Maribacter sp. HTCC2170]
          Length = 545

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 77/315 (24%), Gaps = 82/315 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R + WNI     + G  +              + Q  K    D+V L E      +  
Sbjct: 277 PLRTMVWNIWHGGRRYGKHVG----------VERVVQTIKQAQPDVVALIETYGSGEI-- 324

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     +  +                 I + +++  +                   R  N
Sbjct: 325 IADALGYHFYL----------------ISSNLSIMSRFPI---------NKTIKAFRPFN 359

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--------LLSQQAQWLKDW 194
               E+ +   G+++  L+  L             + S              + + +   
Sbjct: 360 FGGAEINL-GGGRRLTFLNTWLHYLPDYSKNVIEGAISAEDLINAEKETRQSEVESILKE 418

Query: 195 IT--QKKESLVPFVIAGDFNRKINYLGNN------------------------DDFWKTI 228
           I     K    P ++ GDFN   +                              D ++ +
Sbjct: 419 IKPLHSKSGSNPVIMLGDFNSGSHLDWIESTKGIHNGYTIDWPVSLAMINAGFKDSFREL 478

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
           + N  L            ++     +  IDY           I      I Y+       
Sbjct: 479 NINPLLDPGLTWTPRAATSSNEYGLRDRIDYIYYKGGL----IPIESKVIDYH------P 528

Query: 289 GKRLSDHCPISIDYD 303
               SDH  +   +D
Sbjct: 529 LMFPSDHAAVITVFD 543


>gi|332532029|ref|ZP_08407913.1| hypothetical protein PH505_ab01530 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038656|gb|EGI75099.1| hypothetical protein PH505_ab01530 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 360

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 72/283 (25%), Gaps = 61/283 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             VR++S N+   + +                   L         D++   E  S+    
Sbjct: 99  HSVRIMSANVLMSNHKS----------------EQLISLVDEHQPDLLITLESDSWWENK 142

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               K  +  +                D    + +  K   +  Q   L+          
Sbjct: 143 LSVIKKNYPYYIE-----------CPKDNRYGMHLYSKFKILDAQICELIEEDIPS---- 187

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               + +L E N + + +    +       + E++  P  S L   A+ L       K  
Sbjct: 188 ----IHILFE-NDEGLQMQGHFIHPAPPSPTEEDSSRPRDSELIMVAKAL-------KNP 235

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++AGD N              +      L                   + P+D+  
Sbjct: 236 TRPTIVAGDLNDVAWSRSTRLFMQIS----GFLDPRKGRGFYNTFHASYFFMRWPLDHLF 291

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +               +    IK   K  SDH  +  +  +
Sbjct: 292 HSEG--------------FKVKRIKRLAKYGSDHFALLTELSY 320


>gi|152967181|ref|YP_001362965.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
 gi|151361698|gb|ABS04701.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
          Length = 251

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 73/295 (24%), Gaps = 54/295 (18%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           + P  A    ++R+ + N+  L                  D   L    +   AD+V +Q
Sbjct: 1   MAPPGARAVTRLRVATVNVREL----------------LDDTAALGALLRTAAADVVCVQ 44

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E  +++                                    A R        ++ P   
Sbjct: 45  EAPTHSLAVHRLGVLAADAGLWVAAAGR-----DGAGTAVLTAARVDVRAASVRALP-TP 98

Query: 133 AKDSFSRAGNRRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            +  +     R   E++V +       +++ V  +HL       S +       + L   
Sbjct: 99  RRRGWKPVRRRGTAEVVVRVPLAGGWSREVLVRSVHLGLDPAERSGQVARVLPGTPLPG- 157

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                           P V+AGD N +     +          +  L+       S    
Sbjct: 158 --------PCGPWFDAPAVLAGDLNEEPGGPVHGRL-------STVLVDAADAAGSPFPT 202

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +  +D  ++D       +                     SDH  +  D 
Sbjct: 203 FPARAPRRRLDLVLVDHRLSVTAVSTPAG-----------EAAAASDHLAVVADL 246


>gi|83314890|ref|XP_730557.1| AP endonuclease-related [Plasmodium yoelii yoelii str. 17XNL]
 gi|23490314|gb|EAA22122.1| putative AP endonuclease-related [Plasmodium yoelii yoelii]
          Length = 554

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/367 (8%), Positives = 86/367 (23%), Gaps = 119/367 (32%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------- 74
           +V+WN+N+++ +           +    +    ++   ++AD++  QE+           
Sbjct: 211 IVTWNMNSITVRY----------KNREKWKRFIKFVNEINADVLCFQEVRLPALNVPKNG 260

Query: 75  -------------------GSYNAVAKVFPKNTWCIFYST--------ERLINHSKRDSN 107
                                      +                         ++   S 
Sbjct: 261 VKNGVKNGVKNGVKNEVKNEDEERERGLVKNTDQKSMIDYKIVEDILKNDFKEYNSYFSL 320

Query: 108 NDIHTA---IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
            +I  +   + V+K       +   L     +      R  +     +     ++L  + 
Sbjct: 321 ANIKYSGQLVLVKKDIKVKSVRYNLLFETDPNIHNDEGRIIL-----LEFSNFYLLSTYS 375

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------- 217
            +  F     N             + +K+++   K      +  GD N            
Sbjct: 376 PNNGFDQIKFNRRKLYD-------EQMKNFVLFMKNENKNLIWTGDLNIAPEDIDLSHPI 428

Query: 218 ---------------------LGNNDDFWKTIDPNDSLIRFPKE--------------KD 242
                                    ++F   +   + +  +                  +
Sbjct: 429 EFRKMKKGNVPKEYIGQPGCTDAERENFKTILKNGNLVDSYRYFENYKIKNDPTYKKKTN 488

Query: 243 SRCNANKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              N                 + ID+F++ +N    +              +       S
Sbjct: 489 INDNIYTWRCPFLIGKSCNRAMRIDHFIVSKNLLNQIENVEIH-----GYSVSHTNFYGS 543

Query: 294 DHCPISI 300
           DHCP+ +
Sbjct: 544 DHCPVIL 550


>gi|313145565|ref|ZP_07807758.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134332|gb|EFR51692.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 343

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/367 (11%), Positives = 88/367 (23%), Gaps = 92/367 (25%)

Query: 1   MIRKYVLALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           M+ +Y L  +   +    +     +V+++  NI                      +  + 
Sbjct: 1   MMLRYSLLSIVLWLSTVMAYGKGNEVKVLQMNIWQEGTMVKGG------------FEAIA 48

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                L+ DIV   E+ +Y+    +                       N+ +   I  + 
Sbjct: 49  DEVARLEPDIVMFSEVRNYHGKQFI------SRILQALEERGKRYYGENSKLDVGILSKY 102

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF------CFLDS 172
           K      +  P    +D          ++  + ING+ + V   HL             S
Sbjct: 103 KIE----EQAPNCPLEDDAG-----SVLKARIRINGRDVVVYSAHLDYTHYACYLPRGYS 153

Query: 173 LENTYSPSCSLLSQQA-----------QWLKDWI-TQKKESLVPFVIAGDFNRKINYLGN 220
                     +L               + ++  I   +KE     ++ GDFN   +   N
Sbjct: 154 GVTWKKLDAPVLDVAVIEKANNESLRDEAIRHVIEDARKEKGNIVLLGGDFNEPSHLDWN 213

Query: 221 N-------------DDFWKTIDPNDSLIRF--PKEKDSRCNANKNL-------------- 251
                               +  N         K  +   +                   
Sbjct: 214 ENTKKLWDHNGTVVRWDCSVLLENAGFKDAYRTKYPNPITHPGFTFPSDNEGIAVEKLSW 273

Query: 252 ----RNKIPIDYFVMDQNAYKFLIQESFS------------EILYNEDDIKSRGKRLSDH 295
                 +  ID+     +    L   S              E    +  I   G   +DH
Sbjct: 274 APDADERDRIDFIYFRPDKKLKLKDVSVVGPSKSIVRSKRIEERSKDLFITPLGVWPTDH 333

Query: 296 CPISIDY 302
             +   +
Sbjct: 334 KAVMATF 340


>gi|163739556|ref|ZP_02146966.1| hypothetical protein RGBS107_08350 [Phaeobacter gallaeciensis
           BS107]
 gi|161387309|gb|EDQ11668.1| hypothetical protein RGBS107_08350 [Phaeobacter gallaeciensis
           BS107]
          Length = 333

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 78/315 (24%), Gaps = 71/315 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76
           ++   V +V+WN+      E                     + + L   +V L E+    
Sbjct: 52  ALTASVSVVAWNVERCLFPEDT-----------------ASHIQPLAPQVVLLSEVDHGM 94

Query: 77  ---------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----IHTAIAVRKKNVR 122
                          +     + + +    L   +++    D          A+      
Sbjct: 95  ARTGQRHTTEAMAKALEMAYVFGVEFHELDLGGPTEQAFCTDDFNLFGWHGNAILSAVPP 154

Query: 123 VLQQSYPLLGAKDSF-----------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
                  L      F            R G R A+  ++      I V+  HL+S     
Sbjct: 155 ERVTLIRLDDHGHWFSSDEVPADPDQPRLGGRMAIAAVLPTEAGPICVVSTHLES----- 209

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 +        Q   L   I       +P +I GD N   +   + D   +T+   
Sbjct: 210 ------NADADHRHAQFDRLLRAIDAFAP-DMPVLIGGDLNTGNHLPPDFDWQRETLFEL 262

Query: 232 DSLIRFPKEKDSRCNA------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                +                  +   ++ +D+    +                    +
Sbjct: 263 ARAQGYDWSATPGGVTTRPSLITPHPDRQMKLDW-FCTRGMRS--------TENRLVSSV 313

Query: 286 KSRGKRLSDHCPISI 300
              G+ LSDH  +  
Sbjct: 314 DENGRPLSDHDAVWC 328


>gi|213691505|ref|YP_002322091.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213522966|gb|ACJ51713.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457581|dbj|BAJ68202.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 370

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 76/277 (27%), Gaps = 60/277 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   + +  ++   +++ LQE  +     K  
Sbjct: 150 RVMTFNVY----------------KGQADPQAIVELVRDQRVEVLALQE--TTEDFVKKL 191

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 192 NEAGIEHYLPYAQVSSSDGVFGNG---------------LWSATPLADPADDDVNSSASF 236

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V++ G++I  + +H  +                   Q  + L +    ++ +   
Sbjct: 237 MPGGTVDMGGQQIRFISVHTTAPVPG------------YWRQWKRSLDELGLMRRHTDTR 284

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       N          ID+ V+DQ
Sbjct: 285 YIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSWPTNRATVPMFAG-IDHVVLDQ 343

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  +    E               SDH  + + 
Sbjct: 344 GMKAGQCKVVKVE--------------GSDHAALLVT 366


>gi|240140331|ref|YP_002964810.1| hypothetical protein MexAM1_META1p3842 [Methylobacterium extorquens
           AM1]
 gi|240010307|gb|ACS41533.1| conserved hypothetical protein; putative membrane protein
           [Methylobacterium extorquens AM1]
          Length = 348

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 70/268 (26%), Gaps = 47/268 (17%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
              + +SL   +V ++  +Y            D+V L E  +            W    +
Sbjct: 97  RPDDRISLLVLNVLQSNRNYGAALDLIATKAPDLVLLLETDA-----------GWHAAMA 145

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
             R     + +   D    +    +          LL       R         +V  +G
Sbjct: 146 PLRAHYPHRVEHPQDNTYGLLFYSRLPLRDPTIRFLLQEDVPSLRT-------TVVLPSG 198

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           + +    +H +      S                  L     +  ++    ++AGD N  
Sbjct: 199 EPVTFYGLHPRPPHPGHSSAPRD-----------AELVVVAREVAKTKDSTIVAGDLNDV 247

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                N    ++ I     L              +    + P+D+    ++         
Sbjct: 248 AWSHTNR--LFQNIS--GLLDPRQGRGLFSTFHAQYPFARWPLDHIFFSEHFLLS----- 298

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    D++      SDH PI +D 
Sbjct: 299 ---------DMQRLNDVGSDHFPIWVDL 317


>gi|322822521|gb|EFZ28546.1| hypothetical protein TCSYLVIO_5220 [Trypanosoma cruzi]
          Length = 622

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 66/221 (29%), Gaps = 15/221 (6%)

Query: 15  PCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
               + A   R+V++N+          +++       + +         + Q      AD
Sbjct: 245 TMAPAEAPAFRVVTYNVLHDEFCSTSAAKRRIYPFATDDILSLEYRQVRILQELLAYRAD 304

Query: 68  IVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           ++ LQE G         ++   + +   Y+ +               T   + +  V  L
Sbjct: 305 VICLQECGEKVYRQFFERILHHSGYDGRYTNKNGGVKEGCACFWK-RTRFIMNETLVFPL 363

Query: 125 QQSYPLLGAKDSFSR----AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             +       D  +R       R A+E +  I    +       +     ++    ++ +
Sbjct: 364 NWTTLQEDHPDLVARVSLYPEFREALEKVTSIGALVLLKDLHTKEELIVGNTHLFYHANA 423

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           C +   Q   L   +     S    V+ GDFN      G  
Sbjct: 424 CHIRLLQVYMLLHKLKIFAVSQPSVVLCGDFNFTPTTGGYR 464



 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 23/89 (25%), Gaps = 2/89 (2%)

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                   F +T+     L     E        N  +  +  IDY          L    
Sbjct: 521 KRQPPFGAFRETLSAPLQLRDAYSETGQELPWTNYAMTFREVIDYIFFSPTRLSVLRTVP 580

Query: 275 F-SEILYNEDDIKSRGKRLSDHCPISIDY 302
              E   +E+      +  SDH  +  D 
Sbjct: 581 IPPESELSENVALPNKQYPSDHLALIADL 609


>gi|322704606|gb|EFY96199.1| exonuclease III [Metarhizium anisopliae ARSEF 23]
          Length = 603

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/327 (10%), Positives = 77/327 (23%), Gaps = 81/327 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  +S+   +R++S+N+     Q                     ++  + + DIV LQE 
Sbjct: 317 PAGSSLVDNLRVLSFNLWHGGTQVSNYH------------EKQVRFLADKNVDIVGLQES 364

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +   ++     W                  +     +++  +           +   
Sbjct: 365 TGGHG-TRLAHALGW-----------------YSWQGPDVSIISRYPITQVYPATSVSGS 406

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT-----------YSPSCSL 183
                        + + ++G    ++  +           +               + S 
Sbjct: 407 -------------VRISLDGADSDIIIWNAHLGYDPYGPYDFCFDKMSVSRVMEREAQSG 453

Query: 184 LSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWK--------------- 226
            + Q Q +   +     +   VP ++ GDFN   +         +               
Sbjct: 454 RTPQIQEMTGKMGDHLANADNVPVLLVGDFNAPSHLDWIEASKSQHCGIGQVAWPTSKYP 513

Query: 227 ----TIDPNDSLIRFPKEKDSRCNANKNLRNKIP------IDYFVMDQNAYKFLIQESFS 276
                ID        P        +   L N         ID+             E+  
Sbjct: 514 TDAGLIDSFRVAHSDPVATPGITWSPIYLDNNGRPEPLDRIDFVYHKGRKLAVRDSEAVV 573

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
                        +  SDH  +   Y 
Sbjct: 574 VGNPTAQPNHGNNEWTSDHKAVLTTYS 600


>gi|221055699|ref|XP_002258988.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase)
           [Plasmodium knowlesi strain H]
 gi|193809058|emb|CAQ39761.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase),
           putative [Plasmodium knowlesi strain H]
          Length = 516

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/358 (8%), Positives = 85/358 (23%), Gaps = 107/358 (29%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--------- 75
            +V+WN+N+++ +           +    +     +   ++AD++  QE+          
Sbjct: 183 TIVTWNMNSITVRY----------KNKEKWNAFMSFFNRINADVLCFQEVRLPALNLYDA 232

Query: 76  -------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--IAVRKKN 120
                                   +        +    ++     N  ++   + V++  
Sbjct: 233 KEAKDGERDRGKVKNTDQKSQVDFDIMEKILKEDFHNYNAYFSLANIKYSGQLVLVKRSI 292

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                +                R     ++ +   K ++L  +  +  F           
Sbjct: 293 PIKSIRYNLSFDLDPREHHHEGR-----VIIVEFSKFYLLSTYTPNNGFEPVKFERRRLF 347

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------------------- 219
                   + LK++++  +      V  GD N                            
Sbjct: 348 D-------EKLKEFVSVLRNKKKNLVWTGDLNIAPEDTDLSHPAEFRRMKKGNVPKEFVG 400

Query: 220 -------NNDDFWKTIDPNDSLIRFPKEKDSRCN-------------------ANKNL-- 251
                     +F   +   D +  +    + R N                          
Sbjct: 401 QPGCTDFERKNFRGILSAGDLIDSYRHLANLRANKGEPGKATHNRAVSDINDNIYTWRCP 460

Query: 252 -------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     + ID+F++ ++    +              +       SDHCP+ +  
Sbjct: 461 FLMGKSCNKAMRIDHFIVSRDFMPNVENVEIH-----GYSVFHNNFYGSDHCPVILHL 513


>gi|78186003|ref|YP_374046.1| AP endonuclease [Chlorobium luteolum DSM 273]
 gi|78165905|gb|ABB23003.1| AP endonuclease, family 1 [Chlorobium luteolum DSM 273]
          Length = 267

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 83/303 (27%), Gaps = 79/303 (26%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAKV 83
           + SWN+N +  +EG                 L  + +    D++ LQE+ +        +
Sbjct: 3   VASWNVNGIRAREG----------------ALESWVRQSSPDVLILQEVKASVEEIPLSI 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  F++           S    ++   +  K    L+ +   +   D  +R    
Sbjct: 47  MSLDGYRSFWND---------SSIRKGYSGTGILMKETPALEGATFEIPPFDIENR---- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V ++  ++ ++  ++             +    L     + + +++ +      
Sbjct: 94  -----TVVLHTGELSIIGTYVPRG--------DSAQHYVLKLGYLEAMHEYVRELLACGR 140

Query: 204 PFVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             ++ GD N                              +          +    R +  
Sbjct: 141 QILVTGDMNVAHRQVDLHRSENRPGATGIRPEERSAIDRLIALGLSDVMRELNPERDDLF 200

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID F +       +++ +               ++ SDH PI 
Sbjct: 201 TWWPYWRMARERNIGWRIDCFYLSGYRKDRILRAAV-----------DMPEKSSDHAPII 249

Query: 300 IDY 302
           +++
Sbjct: 250 LEF 252


>gi|254584744|ref|XP_002497940.1| ZYRO0F16984p [Zygosaccharomyces rouxii]
 gi|186929042|emb|CAQ43367.1| Inositol phosphosphingolipids phospholipase C [Zygosaccharomyces
           rouxii]
 gi|238940833|emb|CAR29007.1| ZYRO0F16984p [Zygosaccharomyces rouxii]
          Length = 462

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/318 (11%), Positives = 88/318 (27%), Gaps = 61/318 (19%)

Query: 23  KVRLVSWNIN---TLSEQEG----------VSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +L+++N      LS                 + +     + +  L +++++    D+V
Sbjct: 24  SFKLLTFNTWGLKWLSTNRKERLRAIGDELSGRFTSVPIPGSDNIELGKRHSQFEQYDVV 83

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+              + +   +E    H    S       +A+  +        Y 
Sbjct: 84  ALQEVWCQEDWD-------YIVMRCSENYPYHRIFYSGIITGPGLAILSRIPIESTFLYR 136

Query: 130 LL--------GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                        D +        +   ++ N   + +++ H+ +   L       +   
Sbjct: 137 FPLNGRPTAVHRGDWYVGKSVAITLLQQIDNNTPPLAIMNSHMHAPYALQG----DAAYA 192

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------------- 221
              + QA          K++    ++ GD N +   L +                     
Sbjct: 193 CHRACQAWDFAKLANLYKKAGYAVIVTGDLNSRPGSLHHRLLTDETDLVDSWEQLYGQQD 252

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEI 278
            +    + P++ +I      DS  N  +  +       +DY ++D +             
Sbjct: 253 PETLAKLKPSEQIIYGCTTCDSNLNTYRLDKRLDEACRLDYALVDPDRLLPTAAG----- 307

Query: 279 LYNEDDIKSRGKRLSDHC 296
                +        SDH 
Sbjct: 308 -ARFTERIPGVGSFSDHF 324


>gi|167533155|ref|XP_001748258.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773378|gb|EDQ87019.1| predicted protein [Monosiga brevicollis MX1]
          Length = 372

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 74/299 (24%), Gaps = 55/299 (18%)

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------GSYNAVAKVFPKNT-------- 88
           +           +       DAD+  LQE            +  +++ P           
Sbjct: 88  HCDDDGQPRLDEMLVQLVAYDADVYLLQEFSNFRLFTKDDASYTSRLVPDLNPLGKMVLE 147

Query: 89  -WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
            +C   +                    A+  ++  V   S P        S    R A  
Sbjct: 148 WYCEVLTRCAPGPRPAAKWAFVTFAGNAILSRHPMV---SLPAAVRPKDGSPEQPRGA-- 202

Query: 148 LLVEINGKKIWVLDIHL----KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                  +++ +  + L         L ++   +    +  ++  + ++           
Sbjct: 203 --GPSGRQQLRIKCVQLDIEGHPSLLLHNVHLDHRREPTRHTEWQEVMRIHSEPAPRKAR 260

Query: 204 PFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247
           P + AGDFN       +                        +                 +
Sbjct: 261 PQLFAGDFNALTKSDYSETRWAEIAHIRARTNWEAPVSSLCETIADAGWVDVYARCNRRS 320

Query: 248 NK--NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +     R    IDY              ++ + L   + I  RG   SDH P+  D+ +
Sbjct: 321 DSVLTCRFNTRIDYI---------YTNRAWEDHLRCTNCIIDRGNVSSDHKPVIADFAW 370


>gi|17231714|ref|NP_488262.1| hypothetical protein alr4222 [Nostoc sp. PCC 7120]
 gi|17133357|dbj|BAB75921.1| alr4222 [Nostoc sp. PCC 7120]
          Length = 281

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 87/284 (30%), Gaps = 49/284 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +++++WNI             N  K    D+  +    +    DI+FLQE+     V
Sbjct: 44  SNSIKVLNWNI----------AKNNFEKFWFQDFFKI---LRLYQPDIIFLQEVRMGVNV 90

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++         Y+   +  H +  S       I+   K V V +   P+          
Sbjct: 91  EQIMGFTNMSWAYAPNFIDAHHQTYSGILTAAKISAIAKKVIVTKHHEPVFKT------- 143

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             + ++     ++ ++  +L I+     F+D               Q   L+  I+  + 
Sbjct: 144 -PKVSLITEYSLSHQQQTLLTINSHLINFVD---------LDKFKAQLHELELAISTHRG 193

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           S    + AGDFN                      ++            K      P+DY 
Sbjct: 194 S---ILFAGDFNTW----SRKRAVLLEKTVIRLGLKEAHFTPEENKKIKRFLLSPPLDYI 246

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                + K    +   EI              SDH P+  ++ +
Sbjct: 247 FYRGLSEKPATAKVLDEIC------------SSDHKPLLAEFTY 278


>gi|288924023|ref|ZP_06418089.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
 gi|288344634|gb|EFC79097.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
          Length = 259

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 80/312 (25%), Gaps = 88/312 (28%)

Query: 24  VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------- 75
           +R+ S+N ++ LS  +G             +         +LD D++ LQEM        
Sbjct: 1   MRVGSFNAMHGLSLADG-----------RVEAERFTTAVADLDCDVLGLQEMDLAQPRSG 49

Query: 76  ---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-------TAIAVRKKNVRVLQ 125
                   A     +     ++         R    D           IA+  +      
Sbjct: 50  GGDQAATAATALGASDGGWRFAPTVYGTPGHRWRPADGRRAENEPAYGIALVSRLPVRRW 109

Query: 126 QSYPLLGAKDSFS---------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              PL  +                        R A+  +VE     + V+  HL      
Sbjct: 110 WVVPLGRSPVRSPVLVPGTSRRVRMILLDDEPRVALAAVVETASGPLTVVTTHLSFAPGW 169

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
           ++              Q + L   + +      P ++ GD N               +  
Sbjct: 170 NA-------------WQLRRLVGRLREV---DGPVLLLGDLN---------------LPG 198

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                     + +          ++ +D+ +                 +      ++R  
Sbjct: 199 RLPTWFTGWRRLAAHRTYPAHAPRVQLDHILARGP-------------VGTVAASEARRT 245

Query: 291 RLSDHCPISIDY 302
            +SDH  + +D 
Sbjct: 246 AVSDHLALLVDI 257


>gi|260911022|ref|ZP_05917658.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634826|gb|EEX52880.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 350

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/368 (10%), Positives = 75/368 (20%), Gaps = 88/368 (23%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----------VRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           ++K V+AL+     CTA+  +             ++ WNI                    
Sbjct: 1   MKKLVIALLLAAFACTATAQKTAQSATKRAVQFTVLQWNIWQEGTLIPGG---------- 50

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             +  +     +L  D V L E+ +YN V        +                S     
Sbjct: 51  --FEAIVNELAHLQPDFVTLSEVRNYNDVD-------FTHMLCQALKEKGLTYYSFRSKD 101

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
           + +    K+  +                    +   + V +    +  LD    +    D
Sbjct: 102 SGLL--SKHPIIDWTPVFPENRDHGSIYKLVSKVQGVEVAVYTGHLDYLDCAYYNVRGYD 159

Query: 172 SLENT------------YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
                                 S      Q   +       +    V  GDFN   +   
Sbjct: 160 GNTFKETKKPETIEEVLRLNDLSWRDNAVQIFLNEARHDIAAGRCVVFGGDFNEPSHLDW 219

Query: 220 NNDD--FWKTIDPNDSLIRFPKEKDSRCN--------------ANKNLRN---------- 253
            +     +                                                    
Sbjct: 220 IHATANLYDHNGMAIPWTVSTMLHREGFKDSYRELYPNPVTHPGFTYPCFNIAADISKLT 279

Query: 254 -------KIPIDYFVMDQNAYK------------FLIQESFSEILYNEDDIKSRGKRLSD 294
                  +  ID      N  +                +   +   +   +   G   +D
Sbjct: 280 WAPKADERERIDLIYFKGNGMQVDQAQVFGPNVCVCRSQPVQDKWDDPILLPKGGTWPTD 339

Query: 295 HCPISIDY 302
           H  + + +
Sbjct: 340 HRGLLVKF 347


>gi|146089611|ref|XP_001470427.1| RNA-editing complex protein MP100 [Leishmania infantum JPCM5]
 gi|134070460|emb|CAM68802.1| putative RNA-editing complex protein MP100 [Leishmania infantum
           JPCM5]
 gi|322499896|emb|CBZ34970.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 993

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/321 (9%), Positives = 77/321 (23%), Gaps = 51/321 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLW--KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +R+++WN+         +          +   Y +L +     DAD+V +QE+    A 
Sbjct: 680 TLRVLTWNVMFDRYSNQPTPLGMPGIDWCSPKRYPVLAKLIDAEDADVVGMQEVERPFAE 739

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                      +  +    +         +      R    ++   + P      S    
Sbjct: 740 YLAAQPWCRERYIMSCSPQSPILDPWGVLLLVRRGGRWPLQQLKHLNVPAWSGHVSLMPV 799

Query: 141 GNRRAVEL---------------------LVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                                         +  + + + V  +HL +     +       
Sbjct: 800 ATLDLSAAAAHSDNSGTGGGSSAGKSGSRKLAASPRVVNVCSMHLLAPFVKVNEVARTGQ 859

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
             +L     + L+             ++ GDFN   +         + ++    +     
Sbjct: 860 DQALRHALTRQLQG----------DTLVMGDFNDWPSNEFLMPPESRYVECWPIIHPGDY 909

Query: 240 E-KDSRCNANKNLR----NKIPIDYFV-------MDQNAYKFLIQESFSEILYNEDDIKS 287
                  N    L+         D                  L       +     + ++
Sbjct: 910 GKTMDESNTFCKLKIEEIFFGRSDKVFLRTGTATASSPTRGVLKPVEAHLVGTRSVNDEN 969

Query: 288 RGK------RLSDHCPISIDY 302
             +        SDH  +S+ +
Sbjct: 970 GNQEAPAYLFPSDHYGVSMQF 990


>gi|187922391|ref|YP_001894033.1| endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans
           PsJN]
 gi|187713585|gb|ACD14809.1| Endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans
           PsJN]
          Length = 265

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 72/292 (24%), Gaps = 65/292 (22%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           VSWN++      G   W             ++++ ++  AD  FLQE  +    + V   
Sbjct: 20  VSWNLHKGRTPLGFQAW-----------QAMQRWVQSTHADAYFLQEAMARRMPSPVLAS 68

Query: 87  NTWCIFYSTERLINH----------------SKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +           + H                             A+   +   L   + +
Sbjct: 69  SFGSPLADPLSDVWHCQATEIARALELEIALGPNVFKPSWRHGNAILSPHPLDLGGRWDI 128

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   R   R  +       G  + +L  HL                     +Q  W
Sbjct: 129 SA-----HRFEKRGLLVARATFGGHSVTLLCAHLALTRS-------------ARLRQMNW 170

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +  WI ++     P V+AGDFN   N           +     L                
Sbjct: 171 IAHWIAKEAPEG-PLVLAGDFNDWRNDSVP-------LFGEHGLQEVATLLGESGRTFPA 222

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +D   +        IQ +                 LSDH P     
Sbjct: 223 FSPALALDKMFVRGMKPIEWIQPT------------QETAWLSDHLPYMARL 262


>gi|29832489|ref|NP_827123.1| hypothetical protein SAV_5946 [Streptomyces avermitilis MA-4680]
 gi|29609608|dbj|BAC73658.1| putative membrane protein [Streptomyces avermitilis MA-4680]
          Length = 345

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 75/296 (25%), Gaps = 70/296 (23%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L   L+   A     + + + N+N  +     +                 +      A
Sbjct: 109 LNLFGGLLTDRAGSGGDLTVATHNVNADNTDPSGT----------------ARDVAASGA 152

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V L+E+ +            +    +       + +  +      +  +     V   
Sbjct: 153 DVVALEELTATAV-------PVYEKALAA------TYKYHSVQGTVGLWSKYPLKDVRPV 199

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
              L   +          A+   +     +I     HL S     +   T         +
Sbjct: 200 DIKLGWTR----------AMRATIVTPFGEIAGYVAHLPSVRVKLAAGFTAHQ----RDK 245

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            A  L + I  +       V+ GD N  +N         +++    S +R  +       
Sbjct: 246 SADALGEAIADETLRD--VVLLGDLNGTMND--------RSLSNITSQLRSTQGAAGSGF 295

Query: 247 ANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       ID  ++                      +   G   SDH PI+ 
Sbjct: 296 GFSWPASFPMARIDQIMVKG------------VDPVTSWTLPRTG---SDHLPIAA 336


>gi|118376248|ref|XP_001021306.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89303073|gb|EAS01061.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 336

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/280 (11%), Positives = 72/280 (25%), Gaps = 39/280 (13%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +++NI      +G          +      + ++   ++ DIV  QE+   + + K   +
Sbjct: 76  MTFNIANHDSHKGF---------SQYRAKNIAKHIAEVNPDIVGFQEIRENSCIKKNQLE 126

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHT---------AIAVRKKNVRVLQQSYPLLGAKDSF 137
                  + +           + I+           + +  +      +    +  + + 
Sbjct: 127 RILIELQNIQPDFKWYSVWVPSMIYKKAGISTCAEGLGLISRFPIKSFKQ-EFIPLEKNA 185

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  + + +E    +  V           D               Q + + D    
Sbjct: 186 KDKNQRSVLFVELEDINLQYCV----THLSYLDDDQIEQTK--------QLRIIIDNQYA 233

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           K E+ +  +I GDFN               ++  D         +     N         
Sbjct: 234 KSETNLKQIILGDFNYHDEEKTKY-----LLEDEDIRGFKDTAVELNNLQNTWKLY--RY 286

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHC 296
           D           +   S      N++      K   SDH 
Sbjct: 287 DRIYYRGTGLIPVKIYSQEGCSCNDNQNSHCTKHYCSDHF 326


>gi|300741984|ref|ZP_07072005.1| RgfB protein [Rothia dentocariosa M567]
 gi|300381169|gb|EFJ77731.1| RgfB protein [Rothia dentocariosa M567]
          Length = 297

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/306 (10%), Positives = 75/306 (24%), Gaps = 57/306 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------- 76
           +R ++ N +                        L ++  +   D++ LQE+         
Sbjct: 1   MRFLTLNTH-----------SWCEPHQIVKIHELARFIAHHRVDVIALQEVNQYLHSPIV 49

Query: 77  --------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                               +                              +AV  +   
Sbjct: 50  DTPLGYQGGAGIPIREDNYALLLVRFLADLGVQYEWALTETHIGWERYDECVAVLSRMPI 109

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
              +   ++  +  + R   R ++ + V  +   +W    H+  + F       +  +  
Sbjct: 110 ERIEPI-VMSPQYDYDRVERRSSLAVRVGTDAGSVWCASTHMSWWDFQGEPLFAHEFA-- 166

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIRFPKE 240
               QA         ++    P ++ GDFN      G   D      +     +      
Sbjct: 167 -RLSQAL-------TERGQDAPVLMGGDFNTAAQVRGEGYDLVLSSGLVDTREIADRTDG 218

Query: 241 KDSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           + +          +     ID+   D+          F +              +SDH  
Sbjct: 219 EFTVHRGIAGWEGQEEAKRIDFVFADRAVKVLSHAVVFRDNSPK---------AISDHSG 269

Query: 298 ISIDYD 303
           + ++ +
Sbjct: 270 VLVELN 275


>gi|146420181|ref|XP_001486048.1| hypothetical protein PGUG_01719 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 310

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 75/279 (26%), Gaps = 33/279 (11%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           +   NI   +    +       +R       + + + NL   +V LQE+   N +  V  
Sbjct: 57  VYCHNIRQEN-NNMMDGETPWSQRKAGVIQSIVENSSNL-PTLVGLQEVK-QNMLNDVMD 113

Query: 86  KN--TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +       I   K+         P   +K  +  A  R
Sbjct: 114 GLGKHWTHFGVGRLDGKSKGEFAPIIYQPEIWNLKQGKTYWLGQTPDRPSK-GWDAALER 172

Query: 144 RAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                + E    GK +  L+ H      L    ++                  I   K  
Sbjct: 173 IVTVCIFEHRQLGKVVTFLNTHYDHKGKLARENSSKQ---------------IIDIMKSY 217

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               ++ GDFN + +           +       +  +  +      K    +  ID+  
Sbjct: 218 PGASILVGDFNSQPHQ-EAYKTLSTQLKDTSCNCQQRRGPEHTITGFKRGEQETSIDFIW 276

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + + +   + +  G   SDH P++ 
Sbjct: 277 TTP---------GINILHHEVKNHEFNGHYCSDHRPVTA 306


>gi|21222200|ref|NP_627979.1| integral membrane protein [Streptomyces coelicolor A3(2)]
 gi|10432493|emb|CAC10327.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
          Length = 338

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 72/291 (24%), Gaps = 70/291 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P    VA+ VR+++ N+      +                  L    +    D+VF+QE 
Sbjct: 110 PTGPPVAE-VRVLTSNVEFGQGTD-----------------ALIAAVRREKPDLVFVQEC 151

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                 A+ +                    +R    D      +          + P   
Sbjct: 152 ERTCGAALRRDLAA------------GYPHRRAVEGDGAKGSVILSAFPLRAAPAVP--- 196

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                   G       + ++ G  + +   H                   L  ++   L+
Sbjct: 197 --------GTLGMPAAVADVRGHPVRLRLAHPMPPLAD---------RVDLWREELAALR 239

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           D      +   P V+AGDFN   ++          +     L    +             
Sbjct: 240 D--AAAGDRGTPTVLAGDFNASQDHAAFRRILDTGLRDAARLAGQDRTPSWPARTL--PV 295

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ID+ ++  +                  D +      +DH  + +D  
Sbjct: 296 FGTQIDHVLVSGDFAAR--------------DARFLDLAGTDHRALVVDLT 332


>gi|310819623|ref|YP_003951981.1| endonuclease/exonuclease/phosphatase family protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392695|gb|ADO70154.1| Endonuclease/exonuclease/phosphatase family protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 569

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 67/230 (29%), Gaps = 31/230 (13%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +  +  D D+V +QE    +  A    +     F S+            N       +  
Sbjct: 76  RLFQGTDPDVVMIQEFNYGDNSASAIRQFVNTAFGSSFYYYREGGAQIPNG------IIS 129

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTY 177
           +   +    +      +       R      +++ G K +WV+ +HL             
Sbjct: 130 RWPIIASGEWDDPSVDN-------RDFAYARIDVPGPKDLWVVSVHL------------L 170

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           + + S  + +A  L   I     +     I GDFN           F + +     +   
Sbjct: 171 TANASTRNTEAASLVSRIKANIPTGDYLAIGGDFNTDSRSESCFSTFSQVV-----VTSS 225

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           P   D   N N N     P D+ ++D +   +          +    +  
Sbjct: 226 PYPADRNGNTNTNAARAKPYDHVLVDSDLRAYQTATVIGSSSFANGLVLD 275


>gi|115378006|ref|ZP_01465187.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364983|gb|EAU64037.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
          Length = 587

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 67/230 (29%), Gaps = 31/230 (13%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +  +  D D+V +QE    +  A    +     F S+            N       +  
Sbjct: 94  RLFQGTDPDVVMIQEFNYGDNSASAIRQFVNTAFGSSFYYYREGGAQIPNG------IIS 147

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTY 177
           +   +    +      +       R      +++ G K +WV+ +HL             
Sbjct: 148 RWPIIASGEWDDPSVDN-------RDFAYARIDVPGPKDLWVVSVHL------------L 188

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           + + S  + +A  L   I     +     I GDFN           F + +     +   
Sbjct: 189 TANASTRNTEAASLVSRIKANIPTGDYLAIGGDFNTDSRSESCFSTFSQVV-----VTSS 243

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           P   D   N N N     P D+ ++D +   +          +    +  
Sbjct: 244 PYPADRNGNTNTNAARAKPYDHVLVDSDLRAYQTATVIGSSSFANGLVLD 293


>gi|326920839|ref|XP_003206674.1| PREDICTED: protein angel homolog 1-like [Meleagris gallopavo]
          Length = 659

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/203 (10%), Positives = 55/203 (27%), Gaps = 6/203 (2%)

Query: 23  KVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + R++S+NI                   +         + Q  ++ D D++ LQE+   +
Sbjct: 230 EFRVMSYNILAQDLVEQGHALYLHCHPDILNWDYRLPNILQEIQHWDPDVLCLQEVQENH 289

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      F         + R ++         R + + V    Y   G      
Sbjct: 290 YREQLEPTFMKMGF--ACFYKRRTGRKTDGCAVCYKQSRFQLITVSPIEYFRPGLDVLNR 347

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  +   +   G  +  +     +   +           + ++     +       
Sbjct: 348 DNVGLVLLLQPLLPEGLDLKAVSPLCVANTHVLFNPRRGDIKLAQMALLLAEIDKIAKTA 407

Query: 199 KESLVPFVIAGDFNRKINYLGNN 221
           +    P ++ GD N   +     
Sbjct: 408 EGQYYPVILCGDLNSVPDSPLYK 430


>gi|189467306|ref|ZP_03016091.1| hypothetical protein BACINT_03694 [Bacteroides intestinalis DSM
           17393]
 gi|189435570|gb|EDV04555.1| hypothetical protein BACINT_03694 [Bacteroides intestinalis DSM
           17393]
          Length = 293

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 80/306 (26%), Gaps = 51/306 (16%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             +   Q+ ++ S+NI    +++ +             Y    ++AK  +ADI+ L E+ 
Sbjct: 19  SLSVSGQETKITSYNIWDGFDKDSL------------RYERFVEWAKENEADILVLTELV 66

Query: 76  SYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            + A   ++       +  + ++   +            +  +     V  +        
Sbjct: 67  GFKAHDLEILGNLCGYMHTALQKEDGYP---------LGVMSKTPIEVVC-RRMEGFWHG 116

Query: 135 DSFSRAGNRRAVELLVEINGKKIW------VLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               R      +   +     K        ++            +   ++    L + + 
Sbjct: 117 MLHVRTAGIDVIATHLSPFDWKFRQKEAKMIISYVDSLKLEDYFVAGDFNAISPLDADEI 176

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              K WI   K          + N     L     F      +         +    + +
Sbjct: 177 ITHKTWIRNIKRGDASRPAYNNLNDGKFDLSVISSFLAAGMDDPIGRLVRPAEKRMTHPS 236

Query: 249 KNLRNK-----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              +DY ++  +     I      +           + +SDH P
Sbjct: 237 AFRYRWKVEDERLPDLRSRLDYILVSPSLMHRCILGVVERL-----------EGISDHYP 285

Query: 298 ISIDYD 303
           +SI   
Sbjct: 286 VSIVLT 291


>gi|71650128|ref|XP_813768.1| pantothenate kinase subunit [Trypanosoma cruzi strain CL Brener]
 gi|70878684|gb|EAN91917.1| pantothenate kinase subunit, putative [Trypanosoma cruzi]
          Length = 1480

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/329 (11%), Positives = 84/329 (25%), Gaps = 57/329 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQ 72
            P   + + +VR +S+N N L    G                 +  + K ++  D++  Q
Sbjct: 28  TPNMEAGSTQVRALSYNFNILPRGCGGFQN-----------ERIDNFLKCVNEYDVLLFQ 76

Query: 73  EMGSYNAV-----------AKVFPKNTWCIFYSTERLINHSKRDSNND---IHTAIAVRK 118
           E+ + + +            ++  +     F         S              + +  
Sbjct: 77  EVYAASVLPYFVQKHICFQKRLVDELKERGFTHYVISKQPSYPTIFRHNVHSDNGLIIAS 136

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLEN 175
           +       SY     K        R  +   V +    G  + +L  ++       ++  
Sbjct: 137 RFPIEQCGSYTFGCNKRGSQSVR-RGCLFAEVMVPLREGGSVPILFFNVHLRQDESAVAT 195

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-------GNNDDFWKTI 228
                 +     +     +    + S +P V+AGDFN                 +  + +
Sbjct: 196 FSQVMETRRFIDSVIGNLYAENNEASKIPLVVAGDFNINGIDPHNGGKPTKIFMELMQEL 255

Query: 229 DPNDS----LIRFPKEKDSRCNANKNLRN-----------KIPIDYFVMDQNAYKFLIQE 273
            P       +I            +K                   D+F +       +   
Sbjct: 256 QPLGGGLSEVILDTHGYHPSTRPSKLFFPSQSKLNRESLTPQRQDFFFVTPAVDVRM--- 312

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +           LSDH  +S   
Sbjct: 313 -ACIKKFIASSRSPY-VYLSDHFGVSATL 339


>gi|46116288|ref|XP_384162.1| hypothetical protein FG03986.1 [Gibberella zeae PH-1]
          Length = 510

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 78/319 (24%), Gaps = 74/319 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++S N+            K               +  +  AD+V +QE      V +
Sbjct: 227 QLKVLSLNMWNGGTGVTNYHDKQIK------------FLASCGADVVGIQEDQQGRHVPR 274

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     W  + S   +                 +  K             A+        
Sbjct: 275 LADALGWYHWSSGGDVG----------------ILSKYPITADYGVISGPARS------- 311

Query: 143 RRAVELLVEINGKKIWVLDIHLKSF-------CFLDSLENT--YSPSCSLLSQQAQWLKD 193
              V++ ++   K+I     HL          CF     +      + S  + Q +    
Sbjct: 312 -GGVKIALDGTNKEINFFVAHLGYTPYGPYDTCFDHYPVDKIIEREAQSGRTPQMKATLA 370

Query: 194 WITQKKESLV--PFVIAGDFNRKINYLGNN------------DDFWKTIDPNDSLIRFPK 239
            +  + ++    P  + GDFN   +                       +     LI   +
Sbjct: 371 GMKSQLDNADEIPTFLVGDFNAPSHLDYTEGLKDKNCGYSDIKWPTSVLPEEAGLIDSFR 430

Query: 240 EKDSR-------CNA--NKNLRNKIP------IDYFVMDQNAYKFLIQESFSEILYNEDD 284
                         +        +        ID+ +      K    ++          
Sbjct: 431 VAHPDPVKEQGITWSPIYIWNGGRRRPEPLDRIDFVLHKGKGLKVTDSQTVVVGEPKPQP 490

Query: 285 IKSRGKRLSDHCPISIDYD 303
                +  SDH  +   Y+
Sbjct: 491 NHKENEWFSDHRAVLTTYE 509


>gi|291449620|ref|ZP_06589010.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291352567|gb|EFE79471.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 335

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 79/311 (25%), Gaps = 52/311 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           ++R+   A++  L+P  A               L    G+   K+       D T++   
Sbjct: 70  LLRRSATAVIALLLPFVA--------------WLDLFGGLLSDKSRPGG---DLTVVSHN 112

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               + D V      + +  A V                  +K   ++ +   + +  + 
Sbjct: 113 VGAENPDPVGTARALAGSG-ADVLALEELAAEARGTYEKELAKAYPHHTVQGTVGLWSRF 171

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
                +   +         A          R +   V  +   + V   HL S       
Sbjct: 172 PLSDTRPVDVQMDAGPLGDAKPAEVKMAYNRGMRTTVATDHGPLAVYVAHLGSVRVNP-- 229

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 S       AQ L   +    E     V+ GD N  ++         +     ++
Sbjct: 230 --RAGLSSGQRDGGAQSLGQAVA--AEKNERVVLLGDLNGTLDDRAYEGLTSRMESAQET 285

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                                + ID  ++       +  ES   +              S
Sbjct: 286 AGAGFGFSWPATFP------VVRIDQILVRG-----VEPESAWVLP----------DTGS 324

Query: 294 DHCPISIDYDF 304
           DH P++    +
Sbjct: 325 DHLPVAARISW 335


>gi|71404831|ref|XP_805088.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70868359|gb|EAN83237.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 619

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 66/221 (29%), Gaps = 15/221 (6%)

Query: 15  PCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
               + A   R+V++N+          +++       + +         + Q      AD
Sbjct: 242 TMAPAEAPVFRVVTYNVLHDEFCSTSAAKRRIYPFATDDILSLEYRQVRILQELLAYRAD 301

Query: 68  IVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           ++ LQE G         ++   + +   Y+ +               T   + +  V  L
Sbjct: 302 VICLQECGEKVYRQFFERILHHSGYDGRYTNKNGGVKEGCACFWK-RTRFCMNETLVFPL 360

Query: 125 QQSYPLLGAKDSFSR----AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             +       D  +R       R A+E +  I    +       +     ++    ++ +
Sbjct: 361 NWTTLQEDHPDLVARLSLYPEFREALEKVTSIGALVLLKDLHTREELIVGNTHLFYHANA 420

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           C +   Q   L   +     S    V+ GDFN      G  
Sbjct: 421 CHIRLLQVYMLLHKLKIFAASQPSVVLCGDFNFTPTTGGYR 461



 Score = 44.5 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 24/89 (26%), Gaps = 2/89 (2%)

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                 + F +T+     L     E        N  +  +  IDY          L    
Sbjct: 518 KRQPPFEAFRETLSAPLQLRDAYSETGQELPWTNYAMTFREVIDYIFFAPTRLSVLRTVP 577

Query: 275 FS-EILYNEDDIKSRGKRLSDHCPISIDY 302
              E   +E+      +  SDH  +  D 
Sbjct: 578 IPPESELSENVALPNKQYPSDHLALIADL 606


>gi|239946171|ref|ZP_04698108.1| hypothetical protein SrosN15_34623 [Streptomyces roseosporus NRRL
           15998]
          Length = 347

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 79/311 (25%), Gaps = 52/311 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           ++R+   A++  L+P  A               L    G+   K+       D T++   
Sbjct: 82  LLRRSATAVIALLLPFVA--------------WLDLFGGLLSDKSRPGG---DLTVVSHN 124

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               + D V      + +  A V                  +K   ++ +   + +  + 
Sbjct: 125 VGAENPDPVGTARALAGSG-ADVLALEELAAEARGTYEKELAKAYPHHTVQGTVGLWSRF 183

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
                +   +         A          R +   V  +   + V   HL S       
Sbjct: 184 PLSDTRPVDVQMDAGPLGDAKPAEVKMAYNRGMRTTVATDHGPLAVYVAHLGSVRVNP-- 241

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 S       AQ L   +    E     V+ GD N  ++         +     ++
Sbjct: 242 --RAGLSSGQRDGGAQSLGQAVA--AEKNERVVLLGDLNGTLDDRAYEGLTSRMESAQET 297

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                                + ID  ++       +  ES   +              S
Sbjct: 298 AGAGFGFSWPATFP------VVRIDQILVRG-----VEPESAWVLP----------DTGS 336

Query: 294 DHCPISIDYDF 304
           DH P++    +
Sbjct: 337 DHLPVAARISW 347


>gi|22326729|ref|NP_196696.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|215275264|sp|Q8VYU4|CCR4F_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 6;
           Short=CCR4 homolog 6
 gi|332004281|gb|AED91664.1| carbon catabolite repressor protein 4-like 6 [Arabidopsis thaliana]
          Length = 754

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 71/255 (27%), Gaps = 20/255 (7%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIV 69
              +  ++K  ++S+NI  + L+     SL+ +  +         + L        ADI+
Sbjct: 174 TPPSPGSEKFVVLSYNILADYLANDHWRSLYFHIPRNMLSWGWRKSKLVFELSLWSADIM 233

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+  +  + +      +   +                   AI  R    +++ +   
Sbjct: 234 CLQEVDKFQDLEEEMKHRGYSAIWKMRTGNAVDG--------CAIFWRSNRFKLVHEESI 285

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--- 186
                           +E L+  + K+         +      + N +            
Sbjct: 286 QFNQLGLRDNVAQICVLETLLTSHTKENETPPPESSAGSHRVVICNIHVLFNPKRGDFKL 345

Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-FPKEKD 242
            Q + L D      +     P V+ GDFN        N    + +D +         +  
Sbjct: 346 GQVRTLLDKAHAVSKLWDDAPIVLCGDFNCTPKSPLYNFISDRKLDLSGLARDKVSGQVS 405

Query: 243 SRCNANKNLRNKIPI 257
           +     +        
Sbjct: 406 AEFRPPRPENYTTRY 420



 Score = 35.7 bits (80), Expect = 8.3,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 16/67 (23%)

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             E       + +      +DY    +      +     +            K  SDH  
Sbjct: 679 RDENGEPVVTSYHRCFMGTVDYIWRSEGLQTVRVLAPIPKQAMQWTPGFPTPKWGSDHIA 738

Query: 298 ISIDYDF 304
           +  +  F
Sbjct: 739 LVSELAF 745


>gi|83953234|ref|ZP_00961956.1| hypothetical protein NAS141_13036 [Sulfitobacter sp. NAS-14.1]
 gi|83842202|gb|EAP81370.1| hypothetical protein NAS141_13036 [Sulfitobacter sp. NAS-14.1]
          Length = 314

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 93/331 (28%), Gaps = 67/331 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75
           A+ +R+ ++N   LS      L ++  K +    T + +   ++ ADI+ LQ +      
Sbjct: 2   AEPLRIATFNTE-LSRAGPGLLLRDIAKGSDPQITAVTRLLADVAADIIVLQGVDYDLGG 60

Query: 76  -SYNAVAKVFP--KNTWCIFYSTERLINH-----------------SKRDSNNDIHTAIA 115
            +  A+A        ++   ++                         +         A+A
Sbjct: 61  TTLGALADRVGEAGPSYPYRFALPPNAGRPTGLDMDGDGKTGGARDGQGYGRFFGAGAMA 120

Query: 116 VRKKNVRV----------LQQSYPLLGAKDSFSRAGN------------RRAVELLVEIN 153
           +  +   +          L +  P      +                    A  + ++I 
Sbjct: 121 ILSRYPVLRTDVQDYSDFLWRDLPDALLPQTDGAPFPSAAAQEVQRLASHGAWVVPLDIP 180

Query: 154 GK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
            +  + +L  +     F    +     +   +     +L             F++ GD N
Sbjct: 181 DQAPLTLLTFYATPPVFDGPEDRNGKRNHDEVLFWDHYLAGSFD--PPPTDRFILLGDAN 238

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                        +T+  + +L    K + +           + +DY +   +    ++ 
Sbjct: 239 LDPAKGEGLRVAIQTLLDHPALQDPLKGQPTVTFDGLGD---MRVDYLL--PSTDWRVVA 293

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                         +R    S H  + +D D
Sbjct: 294 AGV-----------ARDPAASRHGVVWVDLD 313


>gi|257067847|ref|YP_003154102.1| endonuclease/exonuclease/phosphatase family protein
           [Brachybacterium faecium DSM 4810]
 gi|256558665|gb|ACU84512.1| endonuclease/exonuclease/phosphatase family protein
           [Brachybacterium faecium DSM 4810]
          Length = 411

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/367 (9%), Positives = 89/367 (24%), Gaps = 89/367 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-- 79
           Q +R+ ++N+ +L   E  +L ++           + +  +  + D++ L E        
Sbjct: 44  QNLRVATYNV-SLHRAEQGALLEDLATGEDPQIRAVAEVIQLNNPDVILLNEFDHDEDGA 102

Query: 80  ------------VAKVFPKNTWCIFYSTE-----------------RLINHSKRDSNNDI 110
                                +   ++                        +        
Sbjct: 103 GIDLFRTKYLEVAQNGKSPVFYPYAFTAPVNTGVPSGHDLDQDGATDGPGDAWGFGEFPG 162

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFS------------------RAGNRRAVELLVEI 152
              + +  ++  + QQ+      + +                    R  ++   ++ V +
Sbjct: 163 QYGMVILSRHPILAQQARTFQNLRWADMPSNLLPTEFYGSEIAGELRLSSKSHWDVPVRV 222

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-----KDWITQKKESL----- 202
               + +L  H     F    +     +   +   A +L       WI            
Sbjct: 223 GSSTVHILASHPTPPSFDGPEKRNQRRNSDEIRLWADYLSPGERSRWIVDDAGEKGGLAS 282

Query: 203 -VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-------------------FPKEKD 242
              FV+ GD N       +       +  +  +                          D
Sbjct: 283 REQFVVLGDLNADPFDGDSWPGAIDQLLNHPRVQDTAPRSEGAAEAAEQQGGANADHRGD 342

Query: 243 SRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL---SDH 295
            RC+      +       +DY +        ++  +       +   +  G      SDH
Sbjct: 343 PRCDTADFSDDPGPGNLRVDYVL--PARTFQVVSSAVYWPREGQPGSELTGVDPFPTSDH 400

Query: 296 CPISIDY 302
             + +D 
Sbjct: 401 RLVRVDL 407


>gi|145593299|ref|YP_001157596.1| endonuclease/exonuclease/phosphatase [Salinispora tropica CNB-440]
 gi|145302636|gb|ABP53218.1| Endonuclease/exonuclease/phosphatase [Salinispora tropica CNB-440]
          Length = 315

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 73/289 (25%), Gaps = 44/289 (15%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA--KVFPK 86
           WN+   +     +             T +    +N  AD   L E+     VA  +    
Sbjct: 44  WNVAGWTMNGASTTNGL--------ITAITDSIRNRSADFAALNEVCRGQYVAVIEKLRD 95

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             W    S       S   + +      A+  K        Y L     S  R      +
Sbjct: 96  LGWPEDDSNFARFETSHSTACDGEPFGNAIFSKAPLGTASHYTLSSDGSSEDRTLLCAPL 155

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
               +        +          D++ +  + +      Q   +   +       +  +
Sbjct: 156 SATPK--------VVFCAAHITPSDAIIDGKNINER----QLDEVHSLMETFNALGLTVI 203

Query: 207 IAGDFNRKINYLGNNDDFWKTID--------------PNDSLIRFPKE--KDSRCNANKN 250
           +AGD N + N    N  +  +++               +                +    
Sbjct: 204 LAGDLNNEPNLDPLNKWYSSSLNTQYNSANYGSYRELDDTDTRCAGYGEITVDNGDTGGP 263

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 ID+  + +N        S++    +   +   G   SDH  + 
Sbjct: 264 CGLGRKIDFIFVRENRL----AGSYTGDSLSISTV--CGGYCSDHRIVI 306


>gi|320163021|gb|EFW39920.1| apurinic/apyrimidinic endonuclease 2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 734

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 71/314 (22%), Gaps = 54/314 (17%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNT 88
           +  L      +         +   +LL Q    L ADIV  QE  + +     ++   + 
Sbjct: 181 LLGLGRSLDGAQASGFGPVRSQRSSLLFQLLDALQADIVCFQETKLTAAQVTEEMALVDG 240

Query: 89  WCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
           +  F+S +     +S   +       +  R+        S  +               + 
Sbjct: 241 YDAFFSFSIAKDGYSGIATPIAAQDGLTGRRVVKPPEPSSASVTSVPLQTGDVIKPDGLL 300

Query: 148 --------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ----AQWLKDWI 195
                    +++    +   +      F   +        +            + L+  +
Sbjct: 301 PDYSDMDPTVLDALDSEGRCVVTDHDRFVLFNLYCPRADSAEGERMTFKQEFYRVLQLRV 360

Query: 196 TQKKESLVPFVIAGDFNRKINY--------------------LGNNDDFWKTIDPNDSLI 235
              + +    ++AGDFN                           +       +       
Sbjct: 361 NALRTAGRCVIVAGDFNLTHRRIDHCDPENYTTDDGSVDFEAHPSRRWMESFLAEGRVDC 420

Query: 236 RFPKEKDSRCNANKNL--------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                                        IDY V DQ     +                 
Sbjct: 421 FRHFHPLLSSRYTCWRVDTRARETNYGTRIDYIVTDQALLPDISGC-----------YHL 469

Query: 288 RGKRLSDHCPISID 301
                SDHCP+ I 
Sbjct: 470 TRFPGSDHCPVVIT 483


>gi|239985748|ref|ZP_04706412.1| hypothetical protein SrosN1_00425 [Streptomyces roseosporus NRRL
           11379]
 gi|239992644|ref|ZP_04713308.1| hypothetical protein SrosN1_35450 [Streptomyces roseosporus NRRL
           11379]
          Length = 355

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 79/311 (25%), Gaps = 52/311 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           ++R+   A++  L+P  A               L    G+   K+       D T++   
Sbjct: 90  LLRRSATAVIALLLPFVA--------------WLDLFGGLLSDKSRPGG---DLTVVSHN 132

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               + D V      + +  A V                  +K   ++ +   + +  + 
Sbjct: 133 VGAENPDPVGTARALAGSG-ADVLALEELAAEARGTYEKELAKAYPHHTVQGTVGLWSRF 191

Query: 121 VRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
                +   +         A          R +   V  +   + V   HL S       
Sbjct: 192 PLSDTRPVDVQMDAGPLGDAKPAEVKMAYNRGMRTTVATDHGPLAVYVAHLGSVRVNP-- 249

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 S       AQ L   +    E     V+ GD N  ++         +     ++
Sbjct: 250 --RAGLSSGQRDGGAQSLGQAVA--AEKNERVVLLGDLNGTLDDRAYEGLTSRMESAQET 305

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                                + ID  ++       +  ES   +              S
Sbjct: 306 AGAGFGFSWPATFP------VVRIDQILVRG-----VEPESAWVLP----------DTGS 344

Query: 294 DHCPISIDYDF 304
           DH P++    +
Sbjct: 345 DHLPVAARISW 355


>gi|119471244|ref|ZP_01613747.1| hypothetical protein ATW7_11270 [Alteromonadales bacterium TW-7]
 gi|119445710|gb|EAW26993.1| hypothetical protein ATW7_11270 [Alteromonadales bacterium TW-7]
          Length = 358

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 78/305 (25%), Gaps = 65/305 (21%)

Query: 4   KYVLALVFFLV----PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           K++    +         + +    +R++S N+   +                     L  
Sbjct: 77  KWIFPYTWLAKKEVQSASKNSEHSIRIMSANVLMSNHNS----------------EQLIA 120

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                  D++   E  S+           W    S  +       +   D    + +  K
Sbjct: 121 LVNQHKPDLLITLESDSW-----------WEEKLSVLKKNYPHYIECPKDNRYGMHLYSK 169

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
              +  Q   L+              + +L E N + + +    +       + E++  P
Sbjct: 170 FKLLDAQICELIEDDIPS--------IHILFE-NDEGLEMQGHFIHPAPPSPTEEDSSRP 220

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
             S L   A+ +       K    P ++AGD N              +      L     
Sbjct: 221 RDSELIMVAKAV-------KNPTRPTIVAGDLNDVAWSRSTRLFMQIS----GFLDPRKG 269

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                         + P+D+    Q               +    I+   K  SDH  + 
Sbjct: 270 RGFYNTFHAGYFFMRWPLDHLFHSQG--------------FKVKRIERLAKYGSDHFALL 315

Query: 300 IDYDF 304
            +  +
Sbjct: 316 TELSY 320


>gi|238022209|ref|ZP_04602635.1| hypothetical protein GCWU000324_02116 [Kingella oralis ATCC 51147]
 gi|237866823|gb|EEP67865.1| hypothetical protein GCWU000324_02116 [Kingella oralis ATCC 51147]
          Length = 257

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 81/305 (26%), Gaps = 74/305 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++ N+N +                         Y     ADI+ +QE+ +  A   +
Sbjct: 1   MRIITANVNGIRSAYKKGF---------------LDYIAQSQADIICVQELKAQEA--DL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P+                   +    ++ +A+  K      Q    +G       +  R
Sbjct: 44  SPEMQAPHGMHGVW------HCAQKRGYSGVALYSKRQPDAVQ----IGLGQPEFDSEGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V  +   + V+ ++L S    +  +                L         +  
Sbjct: 94  Y-----VRADFGNLSVISLYLPSGTSAEERQAYKYQFLDAFYPILAEL-------IATGR 141

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID---------------PNDSLIRFPKEKDSRCNAN 248
             V+ GD+N     +   +      +                +   +   +         
Sbjct: 142 DIVVCGDWNIAHQNIDIKNWKGNQKNSGFLPEERAWIGRVIADLGWVDTWRTLYPDVAGY 201

Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
               N+           IDY +            + +     +     +  + SDH P+ 
Sbjct: 202 TWWSNRGQAYAKDVGWRIDYQM-----------TTPALAATAQAAHVYKETKFSDHAPLV 250

Query: 300 IDYDF 304
           IDYD+
Sbjct: 251 IDYDY 255


>gi|329850732|ref|ZP_08265577.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis
           biprosthecum C19]
 gi|328841047|gb|EGF90618.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis
           biprosthecum C19]
          Length = 299

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 67/288 (23%), Gaps = 72/288 (25%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A     + ++S N+                    SDY  +    +   AD+V   E  S
Sbjct: 84  PAPDTANLTILSLNVLY----------------RNSDYDRVEDVIRRESADVVVASETDS 127

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              +      + +              +         ++V  K+              + 
Sbjct: 128 EWILQLQSLNDLY-----------PYSQTIPGRGAFGLSVHAKSP----------MKAEV 166

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               G R  +   +        V  +H       D           +  QQ   +     
Sbjct: 167 LELGGERLPL---IRAEFDTYVVYAVHPMPPGSSDKATENG-----VYLQQLAEVARL-- 216

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                  P V+AGDFN  +                D          +           I 
Sbjct: 217 ----ETKPVVLAGDFNTTLWSSNIRPLV------KDRWQWPSGSGAAYTWPVGAAFLGIQ 266

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ID+ +      + +    F  +              SDH P+  D  +
Sbjct: 267 IDHIL-----TQKMRAGRFRVL----------EPIGSDHRPVRADLQY 299


>gi|255038716|ref|YP_003089337.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
 gi|254951472|gb|ACT96172.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
          Length = 398

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/379 (10%), Positives = 92/379 (24%), Gaps = 85/379 (22%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR---------TTSDYTLL 57
           LA+       T + A+ +   ++N++  +E         + ++                +
Sbjct: 15  LAIPELATAQTGTDARMITFATYNVSMEAENYVPRGTPGNSEQVLIKELASGANQQIKNI 74

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPK----------------NTWCIFYSTERLINH 101
            Q  K +  D++ L E       A+   +                +    +YST      
Sbjct: 75  AQIIKTVRPDVILLNEFDYIKNPAEGVGQFIKGYLNEDSNGAKGIDYPYYYYSTVNTGQP 134

Query: 102 S-----------------KRDSNNDIHTAIAVRKKNVR---------------------- 122
           S                     N      + +  +                         
Sbjct: 135 SPYDLDQNGKMEQLGADAWGFGNYPGQYGMVLLSRFPIDTAAVRTFQHFKWKDMPDAFKT 194

Query: 123 -VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                S        +     ++   ++ V++  K I +L  H     F    +     + 
Sbjct: 195 TKEDGSDWYSPEAWAQFPLSSKSHWDIPVKVGDKTIHILASHPTPPTFDGKEDRNGKRNH 254

Query: 182 SLLSQQAQWLKDWITQKK----------ESLVPFVIAGDFNRKINYL-----GNNDDFWK 226
             +     ++     +             +   FVI GD N   +       G       
Sbjct: 255 DEIRFWNDYITQEKGRYIYDDKGQKGGLPANASFVILGDQNASPDEGNAITGGIRQLISN 314

Query: 227 TIDPNDSLIR----FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE-ILYN 281
                 +             +    N     ++  DY +  +  ++ L    F       
Sbjct: 315 PAVNGGTAPASKGGAEHSPGNAFAKNHTAFWRMRADYVLPSRQGFQILDSGVFWPAKGEP 374

Query: 282 EDDIKSRGKRLSDHCPISI 300
             ++  + +  SDH  + +
Sbjct: 375 MAELVEKRESSSDHRLVWV 393


>gi|91781509|ref|YP_556715.1| putative metal-dependent hydrolase [Burkholderia xenovorans LB400]
 gi|91685463|gb|ABE28663.1| Putative metal-dependent hydrolase [Burkholderia xenovorans LB400]
          Length = 265

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 72/292 (24%), Gaps = 65/292 (22%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           VSWN++      G   W             ++++ ++  AD  FLQE  +    A V   
Sbjct: 20  VSWNLHKGRTPLGFQAW-----------QAMQRWVQSTHADAYFLQEAMARRMPAPVLAS 68

Query: 87  NTWCIFYSTERLINH----------------SKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +           + H                             A+   +   L   + +
Sbjct: 69  SFGAPLADPLSDVWHCQATEIARALELEIALGPNVFKPSWRHGNAILSPHPLDLGGRWDI 128

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   R   R  +       G  + +L  HL                     +Q  W
Sbjct: 129 SA-----HRFEKRGLLVARATFGGHSVTLLCAHLALTRS-------------ARLRQMNW 170

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +  WI ++     P V+AGDFN   N           +     L                
Sbjct: 171 IAHWIAKEAPQG-PLVLAGDFNDWRNDSVP-------LFREHGLQEVATLLGESGRTFPA 222

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +D   +        IQ +                 LSDH P     
Sbjct: 223 FSPALALDKMFVRGMKPVEWIQPT------------QETAWLSDHLPYMARL 262


>gi|317125097|ref|YP_004099209.1| endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
 gi|315589185|gb|ADU48482.1| Endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
          Length = 232

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 74/281 (26%), Gaps = 63/281 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R++S+N+  L+     +       R                 D++ LQE+       
Sbjct: 8   DALRVMSYNVQDLTADRAAAARVVRAVR----------------PDVLCLQEVP-----R 46

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++  +     F     L     R          A++ +      +  P+           
Sbjct: 47  RLTTELRLPSFARECGLYWSGGRLGTGGTAILTALKARVHATGARRLPVRLPD------R 100

Query: 142 NRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           +R      V + G+  + V+ +HL                     + A  +        E
Sbjct: 101 SRGLASARVSLPGQPPVTVISVHLSLR-------------AEERVRHADLIL------SE 141

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            L   V+AGD N  ++              +                  + R +  +D  
Sbjct: 142 PLPRTVLAGDLNEGVDG-----------RAHTRFAAHFSLASGGWPTFPSDRPRAALDVI 190

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +                ++   +     SDH P+ +D
Sbjct: 191 FASADL-----ATVEPAAAELDELDAADLAAASDHRPVWVD 226


>gi|17979010|gb|AAL47464.1| At5g11350/F2I11_240 [Arabidopsis thaliana]
 gi|23506113|gb|AAN28916.1| At5g11350/F2I11_240 [Arabidopsis thaliana]
          Length = 754

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 71/255 (27%), Gaps = 20/255 (7%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIV 69
              +  ++K  ++S+NI  + L+     SL+ +  +         + L        ADI+
Sbjct: 174 TPPSPGSEKFVVLSYNILADYLANDHWRSLYFHIPRNMLSWGWRKSKLVFELSLWSADIM 233

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+  +  + +      +   +                   AI  R    +++ +   
Sbjct: 234 CLQEVDKFQDLEEEMKHRGYSAIWKMRTGNAVDG--------CAIFWRSNRFKLVHEESI 285

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--- 186
                           +E L+  + K+         +      + N +            
Sbjct: 286 QFNQLRLRDNVAQICVLETLLTSHTKENETPPPESSAGSHRVVICNIHVLFNPKRGDFKL 345

Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-FPKEKD 242
            Q + L D      +     P V+ GDFN        N    + +D +         +  
Sbjct: 346 GQVRTLLDKAHAVSKLWDDAPIVLCGDFNCTPKSPLYNFISDRKLDLSGLARDKVSGQVS 405

Query: 243 SRCNANKNLRNKIPI 257
           +     +        
Sbjct: 406 AEFRPPRPENYTTRY 420



 Score = 35.7 bits (80), Expect = 8.3,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 16/67 (23%)

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             E       + +      +DY    +      +     +            K  SDH  
Sbjct: 679 RDENGEPVVTSYHRCFMGTVDYIWRSEGLQTVRVLAPIPKQAMQWTPGFPTPKWGSDHIA 738

Query: 298 ISIDYDF 304
           +  +  F
Sbjct: 739 LVSELAF 745


>gi|156848167|ref|XP_001646966.1| hypothetical protein Kpol_2000p76 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117648|gb|EDO19108.1| hypothetical protein Kpol_2000p76 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 464

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 102/343 (29%), Gaps = 72/343 (20%)

Query: 14  VPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--- 68
           +P TA  +   +++ +++N   L         K   K        + +     +  +   
Sbjct: 10  LPATAGDSGNPRIKFLTFNTWGL---------KWVSKHRKKRLEAIAKTLAGENVAVPLE 60

Query: 69  ---VFLQEMG------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
              + L E                 A+ +V+ K  W    S    I    R   + I T 
Sbjct: 61  GSEILLPEDQAAGGPQTMIDNYDVVALQEVWCKEDWEYILSKCSHIFPYTRIFYSGILTG 120

Query: 114 --IAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNRRAVELLVE------INGKKIWVLDIH 163
             +A+  K          +P+ G   +F R        + V        +   + +L+ H
Sbjct: 121 PGLAILSKIPIESTFLYRFPINGRPSAFFRGDWYVGKSISVTLLKPLTPDTSPLAILNSH 180

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-- 221
           + +        N +       + QA          K++    V+ GD N K   L +   
Sbjct: 181 MHAPYAPSGDANYH----CYRACQAWDFSKMANLYKKAGYAVVVVGDLNSKPGSLQHKLL 236

Query: 222 ------DDFWKTIDPNDSLIRFPKEKD--------SRCNA--NKNLRNKI-----PIDYF 260
                  D W+ +     L    +           + C++  N   +         +DY 
Sbjct: 237 TVETGLTDSWEQLKGKQDLSILTRVSPIEQLKIGCTTCDSTLNTWRQKCQPTDAKRLDYA 296

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ++D    K +        +   ++I   G   SDH   +   +
Sbjct: 297 LIDATRLKTVNAG-----VRFTENIPDIGS-FSDHFAYTCTLE 333


>gi|148690371|gb|EDL22318.1| deoxyribonuclease 1-like 2, isoform CRA_a [Mus musculus]
 gi|148690374|gb|EDL22321.1| deoxyribonuclease 1-like 2, isoform CRA_a [Mus musculus]
          Length = 289

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 33/275 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A  +R+ ++N+ +  + +       SV         + Q       DI  +QE+   +  
Sbjct: 19  ATALRIGAFNVQSFGDNKVSDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 67

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           AV+ +  +      +    + +                RK    V   +Y     +D   
Sbjct: 68  AVSLLMEQINRVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVASV-VSTYQYPDPED--- 123

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A +R    +   +           L       +     +   +L       +  W    
Sbjct: 124 -AFSREPFVVKFSVPS----CATKELVLIPLHAAPHQAVAEIDALYDVYLDVIDKW---- 174

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    +  GDFN    Y+  +D     +  ++       +       N +       D
Sbjct: 175 --NTDDMLFLGDFNADCKYVKAHDWPSIRLRSSEVFKWLIPDSADTTVGNSDCAY----D 228

Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRL 292
             V+      + L   S S   + E+    + + L
Sbjct: 229 RIVVSGAHLRRSLKPHSASVHNFQEEFDLDQTQGL 263


>gi|300864082|ref|ZP_07108981.1| hypothetical protein OSCI_590002 [Oscillatoria sp. PCC 6506]
 gi|300337898|emb|CBN54127.1| hypothetical protein OSCI_590002 [Oscillatoria sp. PCC 6506]
          Length = 1252

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 92/331 (27%), Gaps = 61/331 (18%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSY 77
              ++ + ++N + L               +    + L     N     DI+ LQ++   
Sbjct: 459 SDSQLTVATFNASNL------------DPSSEKLVSRLATIIANNLQAPDIIALQDVSDN 506

Query: 78  ---------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           A+           +   +   N+++     +  +A       V 
Sbjct: 507 SGQQDDGIVDAKETYQALIDAIAAAGGGTYEYQQINPNNNQDGGPLNNRSAFLFNPNRVT 566

Query: 123 VLQQS------------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
            +  +                   P      + +     +++  L E N +KI++++   
Sbjct: 567 FVAGTAGSADNAIEVNSGTTVSLNPGRIDPTNSAFNNQSKSLAGLFEFNSQKIFLVNNDF 626

Query: 165 KSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYL 218
            S    + L +   P    S +   +QA  + +++     K++    ++ G FN      
Sbjct: 627 ISQAEDEPLFSPNQPPARLSGAKRIEQAATVNNFVDSILAKDANANIIVLGSFNDFPTSE 686

Query: 219 GNNDDFWKTIDPNDSLI---RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
             N    +      +++          +         N  P+D  ++ QN       E  
Sbjct: 687 ALNVLKGQPEGEGTAVLTNLVQNINLPAARYTAIIDGNSQPLDQILISQNLRDKTAPEID 746

Query: 276 SEILYNEDDIKSRGKRLSDHC--PISIDYDF 304
                 E         L      P+   + F
Sbjct: 747 IVHANAEFTEPEIDNFL---LREPVLSRFSF 774


>gi|163852991|ref|YP_001641034.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           PA1]
 gi|163664596|gb|ABY31963.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           PA1]
          Length = 353

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 69/268 (25%), Gaps = 47/268 (17%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
              + +SL   +V ++  +Y            D+V L E               W    +
Sbjct: 102 RPDDRISLLVLNVLQSNRNYGAALDLIAAKAPDLVLLLETDV-----------GWHAAMA 150

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
             R     + +   D    +    +          LL       R         +V  +G
Sbjct: 151 PLRAHYPHRVEHPQDNTYGLLFYSRLPLRDPTIRFLLQEDVPSLRT-------TVVLPSG 203

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           + +    +H +      S                  L     +  ++    ++AGD N  
Sbjct: 204 EPVTFYGLHPRPPHPGHSSAPRD-----------AELVVVAREVAKTKDSTIVAGDLNDV 252

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                N    ++ I     L              +    + P+D+    ++         
Sbjct: 253 AWSHTNR--LFQNIS--GLLDPRQGRGLFSTFHAQYPFARWPLDHIFFSEHFLLS----- 303

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    D++      SDH PI +D 
Sbjct: 304 ---------DMQRLNDVGSDHFPIWVDL 322


>gi|85704270|ref|ZP_01035373.1| extracellular nuclease [Roseovarius sp. 217]
 gi|85671590|gb|EAQ26448.1| extracellular nuclease [Roseovarius sp. 217]
          Length = 1682

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/375 (9%), Positives = 78/375 (20%), Gaps = 96/375 (25%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRT---------TSDYTLLRQYAKNLDADIVFL 71
               +++ ++N+             N   +              T L +      A++  +
Sbjct: 1304 GGDIQVAAFNVLNYFTSLSDGAATNPAGQARGASTASDLERQTTKLVEAFFETGAEVFAI 1363

Query: 72   QEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            QE+ +              A+            Y+             + I T +     
Sbjct: 1364 QEIENNGFGEGSAIAAFVEALNAEAALRGSSAVYAFVDPTVDGGPIGTDAITTGLIYDSN 1423

Query: 120  NVRVLQQSYPLL--------------------GAKDSFSRAGNRRAVELLVEINGKKIWV 159
             + ++   + +                               NR  V    E     +  
Sbjct: 1424 ALDLVSSDFNVFTEASAAETFALAEVLNPVVASGNQLEDFQRNRPVVAAEFEDKLSGVTF 1483

Query: 160  LDIHLKSFCFLDSLENTYSPSCSL-----------------------------------L 184
                       DS     + +                                       
Sbjct: 1484 TVASNHFKSKGDSGLVGLAEAAQAYLDGGGTGITQADIDALRADPNFDQGDGQGFWNAVR 1543

Query: 185  SQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
            +  A  L  W+            ++ GDFN         D      D  D +        
Sbjct: 1544 ADAAGELTTWLETGYNGTGTDNALLLGDFNAYAKE----DPVQTIADDPDYVDLIDSFIG 1599

Query: 243  -SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--------- 292
                 +      +  +D  +   +    +   +   I   E D+ +   +          
Sbjct: 1600 QEEAFSFIFDGQQGTLDQALASSDIAGLVTGVTEWHINAQEPDLLNYNSQFNNPGFFSPD 1659

Query: 293  ----SDHCPISIDYD 303
                SDH P+ +  D
Sbjct: 1660 VFASSDHDPLIVGLD 1674


>gi|227891722|ref|ZP_04009527.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           salivarius ATCC 11741]
 gi|227866525|gb|EEJ73946.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           salivarius ATCC 11741]
          Length = 375

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/327 (10%), Positives = 87/327 (26%), Gaps = 74/327 (22%)

Query: 27  VSWNINTLSEQEGVSLWKNSVK------------RTTSDYTLL------RQYAKNLDADI 68
            ++N+   +  +  S + ++ K            +  ++  +L          K ++AD 
Sbjct: 67  ATYNVGFGAYNQKFSFFMDTGKMKDGTKTQGKYGKAENEAAVLQNTNGEINTMKKINADF 126

Query: 69  VFLQEMGSYNAVAKVFPK--------NTWCIFYSTERLINHSKR---DSNNDIHTAIAVR 117
           +  QE+   ++ +    +          +   ++      +      D +  + + +   
Sbjct: 127 MLFQEIDVDSSRSYHVNQVKKMSQNFANYEEIFANNFHSPYLLYPLNDPHGAVQSGLLSL 186

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC---FLDSLE 174
            K             +                     +   V+ I + +      ++S  
Sbjct: 187 SKYPVEQATRRKYPVSTS----------FITKFTDLDRCFTVMKIPVTNGHKLILINSHM 236

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK--------INYLGNNDDFWK 226
           + Y     +  +Q + L   +  + +     ++ GDFN                  D+  
Sbjct: 237 SAYDKGGKMRVKQLKLLNSVMESEYKKGNYVIVGGDFNHTFGRKMLTHFKSQQETPDWVS 296

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLR-----------NKIPIDYFVMDQNAYKFLIQESF 275
            +   D             N     R               ID F++ +N          
Sbjct: 297 VLSSKDLAPDIRMVHAKNENTVPTCRGTDIPYQKGKTYTTVIDGFLVSKN---------V 347

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
                N +   +      DH P+ + +
Sbjct: 348 QATSENINTEFAYA----DHNPVKLSF 370


>gi|218460834|ref|ZP_03500925.1| exodeoxyribonuclease III protein [Rhizobium etli Kim 5]
          Length = 164

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 37/146 (25%), Gaps = 30/146 (20%)

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---LGNNDDFWKTIDPND----- 232
                +  + L  +  +  E  VP ++AGDFN                  +   +     
Sbjct: 19  FDYKLRWFRRLHAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWLNDALFRPEVRKAY 78

Query: 233 ------SLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSE 277
                       +            +             ID+F++      +L   S   
Sbjct: 79  AQLVAQGWTDAVRHLHPDERIYTFWKYWRNSFERDAGLRIDHFLLSPTVAPWLRSASVR- 137

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +  SDH P+ I+ D
Sbjct: 138 ------RKPRGWEHTSDHAPVMIELD 157


>gi|320581870|gb|EFW96089.1| hypothetical protein HPODL_2372 [Pichia angusta DL-1]
          Length = 419

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 65/227 (28%), Gaps = 13/227 (5%)

Query: 14  VPCTASVAQKVRLVSWNINTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +P T  V     ++S+N+   +  +  +     ++ +       L    +   ADI+ LQ
Sbjct: 41  LPRTQPVQNTFTIMSYNLLAQALIRRSLFPDNGAILKWNKRSEALLAELEYYAADIMCLQ 100

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           EM            + W    +     N   R    +   A+  +     ++  S+    
Sbjct: 101 EMDYIQY------NSYWSPKLARLGYENKYYRSGTKNHGVAVFYKASKFTLVDSSFMDYD 154

Query: 133 ----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                      A     + + ++   +   VL +      +        +    ++ Q  
Sbjct: 155 KVATNGIVPRTATQNVGLLVALQPKNRPESVLVVGTTHLFWHPYGTYERTRQTYVVLQSM 214

Query: 189 QWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
              +  +     +        AGDFN +           K I  N  
Sbjct: 215 LEFEKRVKLLHPNLAKTYKFFAGDFNSQPYDSPYLSIVQKPITYNAR 261


>gi|302831544|ref|XP_002947337.1| hypothetical protein VOLCADRAFT_120457 [Volvox carteri f.
           nagariensis]
 gi|300267201|gb|EFJ51385.1| hypothetical protein VOLCADRAFT_120457 [Volvox carteri f.
           nagariensis]
          Length = 637

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 84/309 (27%), Gaps = 58/309 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAVAKVF 84
           ++++N+   +E   +                +    +     D++  QE+     +  +F
Sbjct: 196 VLTYNL-WFNEDVALL----------QRMRAIGDLIEREGHPDLLLFQEVTQNMLL--IF 242

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            + +W   Y                 +  + + +++   L    P L  + + S    R 
Sbjct: 243 RQCSWFRLYHCSP-------APEGKSYFTLLLARRDTVTLPAMQPWLEKEFANSC-MGRS 294

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +   V + G+ + V   HL+S               S   +Q +     +     +   
Sbjct: 295 ILFTRVSVGGRPLVVGTTHLESPVGPGP-----QQMVSQRQEQLEVAVRELEAAAGARGD 349

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN---KNLRNKIPIDYFV 261
            ++AGD N      G      +  D   +L+           +N    +      +D  +
Sbjct: 350 VLLAGDLNWSDTRDGPVQTPPRWCDAWQTLMANRDGNTWDPVSNPMLTSRFKGSRLDRVL 409

Query: 262 MDQNAYK----------------------------FLIQESFSEILYNEDDIKSRGKRLS 293
              +A                               ++       +  E   K      S
Sbjct: 410 CRLSASATGTGPSTSLGPRGSTGGAAGGGWQLGAIKMVGTQALPGVTYEYKGKRLPVLPS 469

Query: 294 DHCPISIDY 302
           DH  + +  
Sbjct: 470 DHFGLLVKL 478


>gi|296160793|ref|ZP_06843606.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. Ch1-1]
 gi|295888885|gb|EFG68690.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. Ch1-1]
          Length = 265

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 72/292 (24%), Gaps = 65/292 (22%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           VSWN++      G   W             ++Q+ ++  AD  FLQE  +    A V   
Sbjct: 20  VSWNLHKGRTPLGFQAW-----------QAMQQWVQSTHADAYFLQEAMARRMPAPVLAS 68

Query: 87  NTWCIFYSTERLINH----------------SKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +           + H                             A+   +   L   + +
Sbjct: 69  SFGAPLADPLNDVWHCQATEIARALELEIALGPNVFKPSWRHGNAILSPHPLDLGGRWDI 128

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   R   R  +       G  + +L  HL                     +Q  W
Sbjct: 129 SA-----HRFEKRGLLVARATFGGHSVTLLCAHLALTRS-------------ARLRQMNW 170

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +  WI ++     P V+AGDFN   N           +     L                
Sbjct: 171 IAHWIAKEAPQG-PLVLAGDFNDWRNDSVP-------LFREHGLQEVATLLGESGRTFPA 222

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +D   +        IQ +                 LSDH P     
Sbjct: 223 FSPALALDKMFVRGMQPVEWIQPT------------QETAWLSDHLPYMARL 262


>gi|255018766|ref|ZP_05290892.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL F2-515]
          Length = 136

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 36/147 (24%), Gaps = 36/147 (24%)

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFW 225
                     + +++    +   P V+ GD N                           +
Sbjct: 1   LDYRMTFEDAILEYVK-NLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKF 59

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFS 276
                   +  F        +A      +           IDYFV+ +     L+     
Sbjct: 60  SAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIH 119

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
             +             SDHCP+ ++ +
Sbjct: 120 ADVL-----------GSDHCPVELELN 135


>gi|68077019|ref|XP_680429.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56501361|emb|CAH96637.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 633

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/352 (11%), Positives = 98/352 (27%), Gaps = 78/352 (22%)

Query: 23  KVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +R++S+NI          + +           +T+    LL       D DI+ LQE+ 
Sbjct: 288 TLRILSYNILAPIYTNTKYATEYMFKNINPCYLKTSYRSHLLIGEIN-HDFDIISLQEV- 345

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                ++   KN + ++       ++  +    +   ++ V KK   +++          
Sbjct: 346 -----SEYLHKNLFYVYLYENYYSSYKPKSPYGNDGCSLFVSKKKFNLIEYENCEFNTIV 400

Query: 136 SFSRAGNRRAVELLVEINGKKIW------------VLDIHLKSFCFLDSLENTYSPSCSL 183
                 N   + + +  +  +I             + +     F   ++    +S +  +
Sbjct: 401 RNLELKNIYDIFIKLSDDLDEIIKEIKTVYQIGIFMHNTSQNIFIIANTHLYFHSLAQHI 460

Query: 184 LSQQAQWLKDWITQKKESLV--------PFVIAGDFNRKINYL----------------- 218
              Q   +   + + K              ++ GDFN                       
Sbjct: 461 RVIQVYCILHILEKIKNKYKNKYKNKEIYVILNGDFNTNFESEVFSFVQGDDIMENSKLW 520

Query: 219 -------GNNDDFWK-------------------TIDPNDSLIRFPKEKDSR-CNANKNL 251
                     DD  K                    ++  + L  +   K       N N 
Sbjct: 521 ENSKLFKKEYDDLNKYPTLFNIENNSNDQKINGLYLNRKNFLPLYSAYKKVDIPYTNWNN 580

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                +DY  +        + +   + L+++          SDH  I+ + +
Sbjct: 581 NFIDVLDYIFLSPELKVKRVLKGMDKHLFDQYKGVVSPFNPSDHLSIAAEIE 632


>gi|222619409|gb|EEE55541.1| hypothetical protein OsJ_03775 [Oryza sativa Japonica Group]
          Length = 360

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 94/309 (30%), Gaps = 70/309 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           ++++SWNIN L +      +                 A+  + D++ LQE     ++   
Sbjct: 51  MKILSWNINGLHDVVTTKGFSAR------------DLAQRENFDVLCLQETHLEASLGVS 98

Query: 82  --KVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             ++       +      + ++    S   +   ++  AV  +   +  Q    +   D 
Sbjct: 99  AIRLLIYTEKDVEKFKNLIADYDSYWSCSVSRLGYSGTAVISRVKPISVQYGIGIREHDH 158

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             R         ++ +     ++++ ++ +   FL  L    +      S   + L+   
Sbjct: 159 EGR---------VITLEFDGFYLVNAYVPNSGRFLRRLNYRVNNWDPCFSNYVKILEK-- 207

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKE 240
                   P ++AGD N     +  +                + ++T   +  L+   ++
Sbjct: 208 ------SKPVIVAGDLNCARQSIDIHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRK 261

Query: 241 KDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +                      +DYF+  ++    +            D         S
Sbjct: 262 QHPNAVGYTFWGENQRITNKGWRLDYFLASESITDKVH-----------DSYILPDVSFS 310

Query: 294 DHCPISIDY 302
           DH PI + +
Sbjct: 311 DHSPIGLVF 319


>gi|182683680|ref|YP_001835427.1| hypothetical protein SPCG_0710 [Streptococcus pneumoniae CGSP14]
 gi|182629014|gb|ACB89962.1| hypothetical protein SPCG_0710 [Streptococcus pneumoniae CGSP14]
          Length = 249

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 75/275 (27%), Gaps = 54/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------------- 95
           + +     D D++  QE+      ++V   + +    +                      
Sbjct: 1   MLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEKLLEQGK 60

Query: 96  -ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                        +  H  +A+  K     ++   L+   D  +    RR       ++G
Sbjct: 61  NYYWTWAYNHIGYDRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALAETVVDG 118

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           K++ V  +HL  +      E     +                       P ++AGDFN  
Sbjct: 119 KELAVASVHLSWWDKGFQEEWARFEAVLKKLN----------------KPLLLAGDFNNP 162

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKF 269
               G        +   D+     ++  S     +    K       IDY    +     
Sbjct: 163 AGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKELA-- 220

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      +     ++  ++SDH  ++   ++
Sbjct: 221 -------VENLHVVFDGNKSPQVSDHYGLNAILNW 248


>gi|168209037|ref|ZP_02634662.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|170712739|gb|EDT24921.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens B str. ATCC 3626]
          Length = 263

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 73/267 (27%), Gaps = 40/267 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKNTWCIFY---------STERLI 99
                L +       D++ LQE       +       ++ + +               L+
Sbjct: 18  YKIKYLAKTIVEEKYDVIALQEASQSIKASIKEGNLKEDNYGLILIEEIKKLGGEEYHLV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     + +  K+  V  +S+  +    S +   +R+ V+  ++IN + I  
Sbjct: 78  WDYSHIGYDIYEEGLCILTKHKVVNSESF-YISKSHSKTFWRSRKIVKATIDINNENIDF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              H+            +       + Q + L   I   KES       GDFN       
Sbjct: 137 YSCHMGW----------WHDKEESFTFQVKNL---IAHAKESKNRAFFMGDFNNNAFLKN 183

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKI--PIDYFVMDQNAYKFLIQES 274
              DF K+    D+      +        N      N     ID               +
Sbjct: 184 EGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIF---------TNRN 234

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISID 301
                          + +SDH  + I+
Sbjct: 235 IKVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|320582102|gb|EFW96320.1| endonuclease/exonuclease/phosphatase family protein [Pichia angusta
           DL-1]
          Length = 525

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/349 (9%), Positives = 86/349 (24%), Gaps = 70/349 (20%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLW--------------------K 44
           +++A++  + P +      +R+ SWN+   S    +++                      
Sbjct: 18  FLIAVLIMVYPRSTQAGWTIRIQSWNLRYDSMPNDITVDETIAALNKTVPIDTQTKYYSD 77

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHS 102
           ++ +  ++    ++      + D+  + E        + ++       +           
Sbjct: 78  DTEQPWSTRRIGIKNEVLFNEVDLFTVNEGLHRQVEDLKELLDMPYIGVGRDDGAQAGEY 137

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
           +    N     +          +   P         R+             G K  V++ 
Sbjct: 138 QAIFYNPESIKLLSNDTFWLSDEPFEPSKYPGAGSYRSCTVG--YFQTNKGGTKFVVINA 195

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           HL                       A        +++    P  + GDFN +++   N  
Sbjct: 196 HL-----------DDQSDDQRRLGAALIKYRAAYEQETKKAPVFLVGDFNSQVSGETNGA 244

Query: 223 DF---------------------------WKTIDPNDSLIRFPKEKDSRCNANKNL--RN 253
                                        ++ +D  ++     +  +            +
Sbjct: 245 YKITTGRLEFPIDRLNSTFVSKYNHSGSGFEFLDLIEATPVENRLGNLATFTGFKNDVDS 304

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              ID+                +      ++       LSDH P+  D 
Sbjct: 305 FSRIDFQFGSN------TSNWEAIRYKVGENWYDDSYYLSDHRPVISDI 347


>gi|193785979|dbj|BAG54766.1| unnamed protein product [Homo sapiens]
          Length = 288

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 89/276 (32%), Gaps = 30/276 (10%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
            A  +R+ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N 
Sbjct: 17  SALAMRICSFNVRSFGE---------SKQEDKNAMDVIVKVIKRC--DIILVMEIKDSNN 65

Query: 79  ----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + +   +N+         + +   R++  + + A   ++K V V ++SY     +
Sbjct: 66  RICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQ 123

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D  +   +R    +  +     +    I                 S   + +  +   D 
Sbjct: 124 DGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPET--------SVKEIDELVEVYTDV 175

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             + K     F+  GDFN   +Y+         +  +   +    +++            
Sbjct: 176 KHRWKAEN--FIFMGDFNAGCSYVPKKAWKNVRLRTDPRFVWLIGDQEDTTVKKSTNCAY 233

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             I   +  Q     ++ +S S   + +    +  +
Sbjct: 234 DRI--VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEE 267


>gi|90408567|ref|ZP_01216723.1| putative endonuclease/exonuclease/phosphatase family protein
           [Psychromonas sp. CNPT3]
 gi|90310321|gb|EAS38450.1| putative endonuclease/exonuclease/phosphatase family protein
           [Psychromonas sp. CNPT3]
          Length = 514

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/364 (12%), Positives = 96/364 (26%), Gaps = 92/364 (25%)

Query: 2   IRKYVLALVFFLV--------------PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47
           ++K +LA +   +              P       ++ +++ N+      +     +N  
Sbjct: 1   MKKTLLATIIISLLTTGCDSSNDTEPMPTPTIKTTELTVLTANVWNELSHDYNDAIENPE 60

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDS 106
            +            KN  ADI+ LQE G  +A +A+      W                 
Sbjct: 61  GKIAYLLA--VDEMKNAKADIILLQESGGTSARLAEDLNMYLWQ---------------- 102

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
            +D+    A+  K   +              S    R  V + +++NG+ + V   HL  
Sbjct: 103 GSDVIADTAILSKYPIMEVFDNTSSLNSKDESDTARRANVGVKLDVNGRDVVVWSNHLDY 162

Query: 167 FCFL----------------------DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
             ++                      D+ E       S    Q Q++ D +     S   
Sbjct: 163 THYINYDARGGDGVTWSARFGCVQVTDTDELYRKNMASKRPAQIQYVIDNVKPLIHSDTL 222

Query: 205 FVIAGDFNRKINYLGN---------------NDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            ++ GDFN                        +   + ++   +        D   +   
Sbjct: 223 IIVGGDFNEPSGLDWTDATESMFDHKGVSFNYESNKRLLNAGLTDTYREIYPDPVTHPGI 282

Query: 250 NLRN----------------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                                     +  ID+   +  A    +  S     Y+++  K 
Sbjct: 283 TWPYNNEDSWMDTKSYLRQCGRYLDDRDRIDFIYYNAQATGVKLSASTVVGPYSKEFFKP 342

Query: 288 RGKR 291
               
Sbjct: 343 VDDN 346


>gi|312881993|ref|ZP_07741747.1| endonuclease/exonuclease/phosphatase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370288|gb|EFP97786.1| endonuclease/exonuclease/phosphatase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 301

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 49/310 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++   WN+   S     +  K S +   S   +L +     D  ++ + E+ S +     
Sbjct: 6   LKFGWWNV---SLSPPRAKTKGSPENYQSISRILVEILIKHDLSLIGVCEVSSND----- 57

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +       +  +++    +       TA+    + V V      L   +        +
Sbjct: 58  MDQIQIHFQGTPYQVLPLDHKVGRTKFDTAVIYDPRRVCV-SHEVDLKRTERGQVIKLGQ 116

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + ++   K   ++  H  S               S     AQ L D +     +  
Sbjct: 117 ALQVIDLKEADK-FNLILCHWASRITSSGE--------SKRKLAAQGLYDAVRDMMRNDE 167

Query: 204 PFVIAGDFNRKINYLGN---------------------NDDFWKTIDPNDSLIRFPKEK- 241
             +I GDFN                              + FW+ +   +      ++  
Sbjct: 168 HIIIMGDFNASPYDSVMLEELNATRCHEAVRRHPTELFYNPFWRALPSKEVYNYTMRDTP 227

Query: 242 --DSRCNANKNL--RNKIPIDYFVMDQNAY---KFLIQESFSEILYNEDDIKSRGKRLS- 293
              S  +  ++   +     D  V   N     ++ + ES +  L++E    S     S 
Sbjct: 228 HFPSGSHRYQDPCGQYWHTFDQMVFSGNFLGPSEWHLNESTTRTLFDEPLESSILDNKSI 287

Query: 294 -DHCPISIDY 302
            DH P+  + 
Sbjct: 288 IDHLPVVCEI 297


>gi|254562926|ref|YP_003070021.1| hypothetical protein METDI4575 [Methylobacterium extorquens DM4]
 gi|254270204|emb|CAX26198.1| conserved hypothetical protein; putative membrane protein
           [Methylobacterium extorquens DM4]
          Length = 348

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 60/244 (24%), Gaps = 47/244 (19%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                   D+V L E  +            W    +  R     + +   D    +    
Sbjct: 121 DLIAAKAPDLVLLLETDA-----------GWHAAMAPLRAHYPHRVEHPQDNTYGLLFYS 169

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +          LL       R         +V  +G+ +    +H +      S      
Sbjct: 170 RLPLRDPTIRFLLQEDVPSLRT-------TVVLPSGEPVTFYGLHPRPPHPGHSSAPRD- 221

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                       L     +  ++    ++AGD N       N    ++ I     L    
Sbjct: 222 ----------AELVVVAREVAKTKDSTIVAGDLNDVAWSHTNR--LFQNIS--GLLDPRQ 267

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                     +    + P+D+    ++                  D++      SDH PI
Sbjct: 268 GRGLFSTFHAQYPFARWPLDHIFFSEHFLLS--------------DMQRLNDVGSDHFPI 313

Query: 299 SIDY 302
            +D 
Sbjct: 314 WVDL 317


>gi|77164511|ref|YP_343036.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|254433656|ref|ZP_05047164.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
 gi|76882825|gb|ABA57506.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|207089989|gb|EDZ67260.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
          Length = 248

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 73/284 (25%), Gaps = 40/284 (14%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S + +  + ++N+                +R       LRQ+      DI+  QE  S +
Sbjct: 2   SSSLRFVVCTYNLW-------------QDERWPERQEPLRQFITLHRPDILCAQEFCSQS 48

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                    T                       + I   +    +L       GA+D   
Sbjct: 49  QCLLDQALPTHQRV---------DDSFEGWKGESNIYWNESLFNLL-----EYGAEDIGI 94

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               RR   + ++        L +    + +  + +       ++   QA      + + 
Sbjct: 95  LEQWRRLFWVRLQPKITGGPPLLVATAHYTWPGNRQERSDR-VNVRVAQALNTIKMLRRL 153

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P +  GD N   +Y          +    + +    +                +D
Sbjct: 154 ATQSSPLLFMGDLND--HYSPLKILQEGGLTDCFTALGRIPQITRPAYPTYVHT-PQVVD 210

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +                +  +  D        SDH P+ + Y
Sbjct: 211 WVLH---------WGPLQPMTCDVVDFFVGDIAPSDHKPLLVTY 245


>gi|322693718|gb|EFY85569.1| exonuclease III [Metarhizium acridum CQMa 102]
          Length = 705

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 79/318 (24%), Gaps = 82/318 (25%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             + +++ ++S+N+            K              ++  N  ADIV LQE    
Sbjct: 366 EPLVKELTILSFNLWFGGTPVKDYHAKQ------------VRFITNARADIVGLQESTGG 413

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +A+ ++     W  +                     + +  +   V Q           +
Sbjct: 414 HAI-RLAKALGWDYW-----------------QGDDVGIISRYPMVEQ-----------Y 444

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS---------LLSQQA 188
           +      AV + ++  G++I   + HL    +          S             + Q 
Sbjct: 445 APVERCGAVRIALD-RGQEINFWNCHLGYTPYGPYDFCFDHLSPEEVHKNEIKSRRTPQI 503

Query: 189 QWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-- 244
             +   +     + S  P +  GDFN   ++L   +   K             +      
Sbjct: 504 INIMKHMQDHLSQSSKTPVIFTGDFNA-PSHLDWTNATKKLHCGQGYFPWPTSKHPVDAG 562

Query: 245 -------------CNANKNLRN-----------KIPIDYFVMDQNAYKFLIQESFSEILY 280
                                            K  ID+        K    E+      
Sbjct: 563 LIDSFREVHSDPLTKPGITWSPIYLDNEGRVEPKDRIDFIYHKG--LKTRSSEAVVVGQP 620

Query: 281 NEDDIKSRGKRLSDHCPI 298
                    +  SDH  +
Sbjct: 621 TAQPDHYYNEWPSDHAAV 638


>gi|187607282|ref|NP_001120421.1| CCR4-NOT transcription complex, subunit 6-like [Xenopus (Silurana)
           tropicalis]
 gi|170285250|gb|AAI61170.1| LOC100145505 protein [Xenopus (Silurana) tropicalis]
          Length = 523

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 87/343 (25%), Gaps = 72/343 (20%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  + ++      +           + +   + DADI+ LQE+ +    
Sbjct: 183 SFTVMCFNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVSCDADIISLQEVETEQYY 242

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLGAKDS 136
               P      +       + +K  S+ +       AI  R +   ++Q+          
Sbjct: 243 TLFMPALKERGYDGFFSPKSRAKIMSDQEKKHVDGCAIFFRTEKFSLVQKHTVEFNQIAM 302

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            +  G+   +  ++  +   + VL           +    +  S   L   A     W  
Sbjct: 303 ANSEGSEAMLNRVMTKDNIGVTVLLEL--HKDLSGAGMKPHHSSEKQLLMVANAHMHWDP 360

Query: 197 QKK-------------------------------ESLVPFVIAGDFNRKINYLGNNDDF- 224
           +                                  + +PFV+  D N   +         
Sbjct: 361 EYSDVKLIQTMMFVSELKSIIEKAASRPGSPTPDPNSIPFVLCADLNSLPDSGVVEYLTN 420

Query: 225 ---------WKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNK 254
                    +K +  N+ L  F     +                         N     K
Sbjct: 421 GGVADNHKDFKELRYNECLTNFSCNGKNGTPDGRITHGFQLRSAYENNLMPYTNYTFDFK 480

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             IDY    +     L      +  +  ++  +       H P
Sbjct: 481 GVIDYIFYSKTHMDVLGVLGPLDPQWMVENNITGCPHP--HLP 521


>gi|89954531|gb|ABD83664.1| sphingomyelin phosphodiesterase 3 [Homo sapiens]
          Length = 638

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 76/284 (26%), Gaps = 56/284 (19%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +   Q   L+DW+   ++S  P             V+ GDFN                  
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSPSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHTLFT 530

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---------LRNKIPID 258
                              T+   + L               +           N   ID
Sbjct: 531 HYRDPCRLGPGEEKPWAIGTLLDTNGLYDEDVCTPDNLQNKSSGQKGRKELLKGNGRRID 590

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y +  +       +    E  +           L+DH P+++  
Sbjct: 591 YMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVAMRL 629


>gi|220929233|ref|YP_002506142.1| endonuclease/exonuclease/phosphatase [Clostridium cellulolyticum
           H10]
 gi|219999561|gb|ACL76162.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulolyticum
           H10]
          Length = 366

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 85/288 (29%), Gaps = 43/288 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++ WN N              +     D      + K  DAD+  LQE   Y     
Sbjct: 102 PIKVICWNTN--------------LWDQDKDKDEFYSFIKKQDADVYLLQEYLHYQTEKD 147

Query: 83  VFPKNTWCIFYSTERLINHSKRDSN----NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                 + +         H     +                N  V+   +P+  +   +S
Sbjct: 148 --SGQPYRLCNIVPGFPLHYMHFDDSERIRKEFPGYYFSTNNQFVIISRFPIKKSYTDYS 205

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWIT 196
                      V ING+ +   ++H+       +    Y          A+ +  K+   
Sbjct: 206 EQYT----VSDVNINGRNVRFYNVHMLLHIETTNPLKPYFYDALHRRFLAREIGFKNLKR 261

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-I 255
             +     + +AGDFN        +D     ID                 + +    K  
Sbjct: 262 DLRNEKSDYFVAGDFNSTKAMGVMDDLLKDHIDGVRYSNDILPL------SYQLYGFKLW 315

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ID+ ++   A   +  +++  I  +         +LSDH PI +  D
Sbjct: 316 RIDFAIL-PKANDNIRFKTYKTISPD---------KLSDHDPIVLSLD 353


>gi|157132334|ref|XP_001656004.1| carbon catabolite repressor protein [Aedes aegypti]
 gi|108881699|gb|EAT45924.1| carbon catabolite repressor protein [Aedes aegypti]
          Length = 492

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/206 (10%), Positives = 49/206 (23%), Gaps = 16/206 (7%)

Query: 23  KVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77
           +  L+S+N+         ++               Y  L      +  DI+ LQEM    
Sbjct: 108 QFTLMSYNMLAQDLLEMHEDLYDQHDQVTLSWPHRYDRLLAEINLVRPDILCLQEMQDNH 167

Query: 78  -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +  +       + + +                       R+    ++            
Sbjct: 168 KDQFSSGLANFRYEMIFKKRTGEKTDGCAIY--------YRRDMFELVDYHDVEYYQPSV 219

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DW 194
                   A+     +       L +      +    ++       +L  +   L     
Sbjct: 220 KRLDRENVAIIAKFRVKSNPSQCLVVATTHLLYNPRRQDIRLAQVQVLLAELDRLAFLSR 279

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGN 220
           +        P ++ GDFN +      
Sbjct: 280 MENGTPRYAPTILCGDFNLQPYTAPY 305


>gi|114587566|ref|XP_001174027.1| PREDICTED: deoxyribonuclease I-like 3 isoform 1 [Pan troglodytes]
          Length = 288

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 88/272 (32%), Gaps = 30/272 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----- 78
           +R+ S+N+ +  E         S +   +   ++ +  K    DI+ + E+   N     
Sbjct: 21  LRICSFNVRSFGE---------SKQEDQNAMDVIVKVIKRC--DIILVMEIKDSNNRICP 69

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +   +N+         + +   R++  + + A   ++K V V ++SY     +D  +
Sbjct: 70  ILMEKLNRNSRRGITYNYVISSRLGRNTYKEQY-AFLYKEKLVSV-KRSYHYHDYQDGDA 127

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +R    +  +     +    I                 S   + +  +   D   + 
Sbjct: 128 DVFSREPFVVWFQSPHTAVKDFVIIPLHTTPET--------SVKEIDELVEVYTDVKHRW 179

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           K     F+  GDFN   +Y+         +  +   +    +++              I 
Sbjct: 180 KAEN--FIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRI- 236

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             +  Q     ++ +S S   + +    +  +
Sbjct: 237 -VLRGQEIVSSVVPKSNSVFDFQKAYKLTEEE 267


>gi|256377724|ref|YP_003101384.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
           43827]
 gi|255922027|gb|ACU37538.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
           43827]
          Length = 276

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 85/303 (28%), Gaps = 63/303 (20%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---G 75
           +   ++R+++WN+            + S  RT +    L +     +AD++ L E+    
Sbjct: 2   TEQDQLRVLTWNVQ-----------RASAARTRAQVEWLVRQ----EADVLVLTEVSAGE 46

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           S   +A+   +  + +        +  +          +                   + 
Sbjct: 47  SGGLLARWLRERGYQVLLPDPAPEDRYRVLLACPADVGL------------------EEA 88

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                   R V   V+ +  ++ V+ +++ S           + +     ++       +
Sbjct: 89  DSGVPMPHRCVAAKVKSSAMEVGVVGLYVPSRGP----RERRNVAKRAFQEEVSAALPGL 144

Query: 196 TQKKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDP------NDSLIRFPKEKDSRCNAN 248
           T +  +  P V+AGD N  +  ++  +  F                    + +      +
Sbjct: 145 TARLGAAGPVVVAGDQNVVEPGHIPAHPVFGAWEYDFYRSFAEAGFTDAFRLRHPEAVEH 204

Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       N    D+  +            +      +         LSDH  + +
Sbjct: 205 SWFGRDTGAGKRNGYRFDHVFLTTTHAALARDCRYLHTPRED--------GLSDHSAMEV 256

Query: 301 DYD 303
             D
Sbjct: 257 VLD 259


>gi|307327843|ref|ZP_07607026.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
 gi|306886555|gb|EFN17558.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
          Length = 341

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 85/296 (28%), Gaps = 72/296 (24%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            +    +    ++ +V+ N+N                   +D     +      AD+V L
Sbjct: 115 LMFSDKSGSGGELTVVTHNVN----------------AENADPAGTAEDVAGSGADVVAL 158

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +E+             T+    +     +  +                    L   YPL 
Sbjct: 159 EELTG-------AAVPTYERALAGTYRYHTVQGTVG----------------LWSKYPLS 195

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQW 190
           G K    + G  RA+   V     ++ V   HL S     ++         S     A+ 
Sbjct: 196 GTKPVDIKLGWTRALRTTVATPRGEVGVYVAHLPSVRVKFNAGFTAGQRDAS-----AEA 250

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L   I++++      ++ GD N  +N         + + P  + +R  +           
Sbjct: 251 LGQAISRERLRK--VILLGDLNGTMND--------RALAPVTAQMRSAQGAAGDGFGFSW 300

Query: 251 LR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   ID  ++       +   +   +           K  SDH P++   D+
Sbjct: 301 PASFPMARIDQIMVRG-----VDPVAAWALP----------KTGSDHLPLAASVDY 341


>gi|262380105|ref|ZP_06073260.1| endonuclease/exonuclease/phosphatase [Acinetobacter radioresistens
           SH164]
 gi|262298299|gb|EEY86213.1| endonuclease/exonuclease/phosphatase [Acinetobacter radioresistens
           SH164]
          Length = 373

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 63/250 (25%), Gaps = 45/250 (18%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
            Y LL +  +    DIV   E              TW    S        +     D   
Sbjct: 109 QYHLLIEQIQKYQPDIVLTLETD-----------ETWQNELSGIEKDYPFRVAVPLDNLY 157

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + +  +      +   +L  +        R         +G+ + +  +H K     ++
Sbjct: 158 GMHLYSRLKLEDTEVKFILSDEIPSIHTTVRL-------RSGQPVQLFCLHPKPPSPTEA 210

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            ++T   +          L     Q K+     ++ GD N            ++ I    
Sbjct: 211 KDSTLRDA---------ELLIVGDQIKDMDKSCIVMGDLNDVAWSRTTR--LFQRIS--G 257

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                   +  +D+                    +   D++      
Sbjct: 258 LLDPRVGRHFVNTFHANYPLFRWSLDHVFHS--------------TDFALVDMQRLSHVG 303

Query: 293 SDHCPISIDY 302
           SDH P+ I  
Sbjct: 304 SDHFPVYIVL 313


>gi|299755652|ref|XP_001828796.2| hypothetical protein CC1G_06782 [Coprinopsis cinerea okayama7#130]
 gi|298411320|gb|EAU93062.2| hypothetical protein CC1G_06782 [Coprinopsis cinerea okayama7#130]
          Length = 443

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 67/215 (31%), Gaps = 17/215 (7%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           +            +++++WNI             ++  +      ++ Q  + LDAD++ 
Sbjct: 52  WIPFTVEGESNLDLKILTWNILAQCLVRRELFPTSNCLKVGQREPMIHQEIQRLDADVLC 111

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+   + +  +     +   Y+T     H            IA +       ++    
Sbjct: 112 LQEVDRMDKLGPMLEAAGYSYRYATGPKKLHG---------CLIAFKASKFVFDEEKVVY 162

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              +D  S  G         +     + V     ++      +  T+         QA  
Sbjct: 163 YDDEDVRSEGGEAHRRGKSFQTRNIGLIVAVKRKENPVHGVIVSTTHLFWHPR---QAGI 219

Query: 191 LKDWITQKK-----ESLVPFVIAGDFNRKINYLGN 220
           L   + + K         P ++AGDFN   +  G 
Sbjct: 220 LVREVARFKAIDLGRQNWPCIMAGDFNFPPDDPGY 254



 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 34/117 (29%), Gaps = 2/117 (1%)

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             L  +  Q   +   + I G  N        +         ++++             +
Sbjct: 326 DELVSFHGQNLRARSAYAI-GSRNHLATLSDPSKSDNPIYGSHNTVPEDRPGYYEPKYTS 384

Query: 249 KNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +  +DY  +   + ++     +  E    E  +  +G   SDH P+     F
Sbjct: 385 YTHYWQSVLDYIFVLGDSQFQVAGFLAALEKEALEPGLPQKGVCGSDHLPLVTQLKF 441


>gi|254885217|ref|ZP_05257927.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294777877|ref|ZP_06743321.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|319640383|ref|ZP_07995107.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A]
 gi|254838010|gb|EET18319.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294448331|gb|EFG16887.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|317387986|gb|EFV68841.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A]
          Length = 472

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 83/302 (27%), Gaps = 60/302 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +++++++NI     + G                 + +  K  + D++ + E     A+  
Sbjct: 208 QLKVMAFNIFHGGHELG----------QEVGVNRVVEVIKAENPDVIGMVETYGSGAI-- 255

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     +  +                  + +I  R               +  +   + +
Sbjct: 256 IADALGYYFYL--------------RSSNLSIMSRYPITDTYDLYDSFNCSAATLQISPS 301

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           ++   + + ++ + I    I+                +  L S     LK + +Q     
Sbjct: 302 QQINYINLWLDYRPITNDQINACESIENIIAGEWSRRAAQLQSI----LKAFPSQWNTME 357

Query: 203 VPFVIAGDFNRKINYLGNNDDF-----------WKTIDPNDSLIRFPKEKDSRCNANKNL 251
            P +++GDFN   +    +D             W T    +        ++   +  K  
Sbjct: 358 TPLIVSGDFNSDSHLDWKDDTKNMNGHNGYVIEWPTSKLMEKAHFIDSYREIHPDVKKYP 417

Query: 252 RNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                          ID+        K +  E   +            +  SDH  +   
Sbjct: 418 CLTWSTMAKNELQYRIDFIYYKGKDIKAIQSEMIDKHPV---------RYPSDHAAVVTT 468

Query: 302 YD 303
           ++
Sbjct: 469 FN 470


>gi|150866100|ref|XP_001385585.2| phospholipase C type enzyme [Scheffersomyces stipitis CBS 6054]
 gi|149387356|gb|ABN67556.2| phospholipase C type enzyme [Scheffersomyces stipitis CBS 6054]
          Length = 442

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 87/319 (27%), Gaps = 47/319 (14%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQE 73
             + + +  VRL++ N   L       + K   +R  +    L   A   D  DIV LQE
Sbjct: 16  SNSTTPSVPVRLLTLNCWGL-----KYISKFRRQRLRAIANKLAYPATKDDEYDIVALQE 70

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +   +    +       ++             S       + +  K        Y     
Sbjct: 71  VWCEDDWKYL-DGTCKKVYPYRRVFK------SGIVTGPGLVLLSKIPIDESFLYRFPIN 123

Query: 134 KDSFSRAGNRRAV----ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
             + +       V     + +    +   +    L S       ++  +   +  + QA 
Sbjct: 124 GRASAFFRGDWLVGKSIAITLLKPHQPGAMPIALLNSHMHAPYAQSGENSYSTHRACQAW 183

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------------------------DD 223
                +   + S    +  GD N K   L                               
Sbjct: 184 DFAKLVKMLRRSGYAVIQVGDLNSKPGSLPYKLFTVEGGLSDSWDLCYDKESQLTIEDLA 243

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
             + ++           + +   A+ ++R+   +DY ++D +  K +       + + E 
Sbjct: 244 AMQPLEQIHKAGTTVNNQLNTWRAHSDIRDACRLDYALIDAHNIKPISAA----VKFTEK 299

Query: 284 DIKSRGKRLSDHCPISIDY 302
                    SDH   + + 
Sbjct: 300 LPPPYNCSFSDHFGYTAEL 318


>gi|260773419|ref|ZP_05882335.1| predicted extracellular nuclease [Vibrio metschnikovii CIP 69.14]
 gi|260612558|gb|EEX37761.1| predicted extracellular nuclease [Vibrio metschnikovii CIP 69.14]
          Length = 1089

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/408 (11%), Positives = 96/408 (23%), Gaps = 129/408 (31%)

Query: 24  VRLVSWNINTLSEQE--------GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           +R+ S N+               G++    S          L +    ++AD++ L E+ 
Sbjct: 524 LRVASKNVLNFFNSPFKGDYNPHGLNRGAESQVEFELQKAKLVKALYGMNADVIGLMEIE 583

Query: 76  SYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNND--------------------- 109
           +       A+ ++        +           R   N                      
Sbjct: 584 NNGFGHYGAIKELVDTLNQE-YTEDRYSRRTDARYVGNRYTFVAYDANGDKLITSEDTIG 642

Query: 110 ---IHTAIAVRKKNVRVLQQSYPLLGAKD--------------------SFSRAGNRRAV 146
              I T +  R   V + +     +  ++                       RA  R A+
Sbjct: 643 SDAITTGLIYRPSKVTLEEVDIIPMPRQEAPAITDENGNVLTNSKGELIGSGRAYQRDAL 702

Query: 147 ELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPS-------------CSLLSQQAQWL 191
                ++  GKK+ +   HLKS       +     S              +     A  L
Sbjct: 703 TGTFLVHNTGKKLTISVNHLKSKGSACWEDFQNRDSSNNPIDEDQQGNCENFRVAGAVQL 762

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDSLI------------ 235
            + + ++       +I GD N            ++   K +                   
Sbjct: 763 GEQLAKRYPDNDR-IIMGDLNSYAKEDPMLVLTSNPTNKVLTAARDTWIGNQPQFGSNGA 821

Query: 236 --------------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                            K+      +         +D+ ++       ++      I  +
Sbjct: 822 VITRSFGYTNAVHMMDEKKGRQPSWSYSYNDEIGSLDHMLVSSGLKGRVVDAVDWHINSS 881

Query: 282 EDDIKSR-------------------------GKRLSDHCPISIDYDF 304
           E  +                              R SDH P+ ++  +
Sbjct: 882 ETPLFDYAKRNAGTNPGKFHSTDKDYSNPVVTAFRSSDHDPVLMNLAY 929


>gi|115353147|ref|YP_774986.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
 gi|172062002|ref|YP_001809654.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
 gi|115283135|gb|ABI88652.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
 gi|171994519|gb|ACB65438.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
          Length = 271

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 81/310 (26%), Gaps = 68/310 (21%)

Query: 12  FLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +P     A   ++  VSWN++      G + W             +R + ++  AD+ 
Sbjct: 6   LSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWN-----------AMRNWMQSTHADVY 54

Query: 70  FLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           FLQE  +                 +AV  V+      I  + +  I              
Sbjct: 55  FLQEAMARRMPRPMLATGFGAPIDDAVDDVWHCQATEIAQALDWQIALGPNVFKPSWRHG 114

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+   +   L   + +        R   R  +     + G + + +L  HL        
Sbjct: 115 NAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGARPVTLLCAHLALT----- 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                    +   +Q  W+  WI +      P V+AGDFN   N           +    
Sbjct: 165 --------RAARLRQMHWIAHWIVRNAGDD-PLVLAGDFNDWRNDSV-------ALFGEI 208

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +                    + +D   +                             L
Sbjct: 209 GMSEVATLLGQSGRTFPAFSPALALDKMFVRG------------LTPLEWQAPSGETAWL 256

Query: 293 SDHCPISIDY 302
           SDH P     
Sbjct: 257 SDHLPYIARL 266


>gi|256786907|ref|ZP_05525338.1| hypothetical protein SlivT_20669 [Streptomyces lividans TK24]
 gi|289770800|ref|ZP_06530178.1| StaP [Streptomyces lividans TK24]
 gi|289700999|gb|EFD68428.1| StaP [Streptomyces lividans TK24]
          Length = 330

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 74/300 (24%), Gaps = 55/300 (18%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L+L   L+   +    +  + S N+   +     +                 +       
Sbjct: 84  LSLFGGLLGDKSGAGGEFTMASHNVGAENPDPAGT----------------ARDLAASGV 127

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ L+E+ + +             +++ +  +    +              + V +   
Sbjct: 128 DVLALEEITAQDREVYEKGLAREYPYHTVQGTVGLWSKLP--------LSGTRPVDIATD 179

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             PL   K +       RA+   V      + V   HL S                    
Sbjct: 180 YGPLADTKPADVTMAGNRALRTTVATEKGPLVVYVTHLGSVRLNPRAGFWTDSRDRNAWA 239

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             + L        +      + GD N  ++         + +    S +   +E      
Sbjct: 240 LGEALA------ADRSERIALLGDLNGTVDD--------RALAGITSQLHSVQEAAGNGF 285

Query: 247 ANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       ID  ++                      + + G   SDH P++    +
Sbjct: 286 GFTWPAKFPVARIDQILVRG------------VEPTGSWTLPATG---SDHLPVAAGVSW 330


>gi|46110322|ref|XP_382219.1| hypothetical protein FG02043.1 [Gibberella zeae PH-1]
          Length = 698

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/361 (12%), Positives = 94/361 (26%), Gaps = 75/361 (20%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +   +++++ SWNI  +  +  +       +        + + +  +  DAD + LQE+
Sbjct: 314 VSPSLERIKVFSWNILCDKYATPQTYGYTPTNALNWDYRRSCILEELEIRDADFLALQEV 373

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPL 130
            +      + P      +       + +K  S  D       A+  ++    +L +    
Sbjct: 374 STDAFKEDLSPDLAQLDYKGVHWPKSRAKTMSEKDAQSVDGCAVFYKQSKFILLDKQLIE 433

Query: 131 LGA-----------KDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDS--- 172
                          D F+R   +  + ++      + G +I +++ HL     L     
Sbjct: 434 FATIAINRPDMKNQHDVFNRVMPKDNIAVICFFESRLTGARIILVNAHLTWDSALADVKV 493

Query: 173 ------LENTYSPSCSLLSQQAQWLKDWITQKKESLV--------------------PFV 206
                 +E+    +       A   K  I                            P +
Sbjct: 494 IQTGILMEHVTKLAEKYARWPAVKDKKMIVLPVGEDEVPVPQAEPGPSQEYRTNTEIPLL 553

Query: 207 IAGDFNRKINYLGN------------------------NDDFWKTIDPNDSLIRFPKEKD 242
           + GDFN   +                             D         D+        D
Sbjct: 554 VCGDFNSTEDSSVYELMSMGRVPPDHLDLSSFQYGSFTRDGIEHPFSLRDAYAHIKHTAD 613

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISID 301
                N        IDY     N  + +      +  Y             +DH  I  +
Sbjct: 614 DMPFTNYTPGFADVIDYIWYSTNTLEVVDLLGPPDPEYLKRVPAFPNWHFPADHIQIMSE 673

Query: 302 Y 302
           +
Sbjct: 674 F 674


>gi|77464439|ref|YP_353943.1| hypothetical protein RSP_0860 [Rhodobacter sphaeroides 2.4.1]
 gi|77388857|gb|ABA80042.1| hypothetical protein RSP_0860 [Rhodobacter sphaeroides 2.4.1]
          Length = 309

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 81/309 (26%), Gaps = 43/309 (13%)

Query: 34  LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCI 91
           L       L ++           +R+  + L AD++FL  +   +    A+    + +  
Sbjct: 3   LERAGPGLLLRDIRAGKDPQILAVRRMIEALRADVLFLTGVDYDADLLAARALAGDLYPH 62

Query: 92  FYSTERLIN-HSKRDSNNDIHTA----------------IAVRKKNVRVLQQSYPLL--- 131
             +    +   +  D + D                    + +  +    L + +  L   
Sbjct: 63  LLALRPNVGRPTGIDLDGDGRLGGPGDAQGWGRFGGQGGMVLLSRLPLGLPRDFSDLLWA 122

Query: 132 -------GAKDSFSRAGNRRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSP 179
                        +RA  R A     E+      G  + +L        F    +     
Sbjct: 123 DLPEANLPPMPPEARAVQRLASVGAWEVPLPRTGGPALKLLLWSATPPVFDGPEDRNGRR 182

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +       A+ L   +        P ++ G  N               +  + +L     
Sbjct: 183 AGDEALFWARLLDGRLPFPAPEG-PVLLMGKANIDPLAGDGPRAAIAALLAHPALQDPAP 241

Query: 240 EKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                  A  + R          DY +    A    +  S        D + +   + S 
Sbjct: 242 RGPDGSRATADFRADDGPGLLRTDYIL---PARGLPVTASGVLWPPPGDPLAAVAAQASR 298

Query: 295 HCPISIDYD 303
           H P+ ++ D
Sbjct: 299 HRPVWVELD 307


>gi|87308119|ref|ZP_01090261.1| putative endonuclease/exonuclease/phosphatase family protein
           [Blastopirellula marina DSM 3645]
 gi|87289201|gb|EAQ81093.1| putative endonuclease/exonuclease/phosphatase family protein
           [Blastopirellula marina DSM 3645]
          Length = 306

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/318 (10%), Positives = 75/318 (23%), Gaps = 59/318 (18%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +S+NI      +  +   ++ +   S +  L    K   AD++ +QE  S + +      
Sbjct: 2   LSFNILQ-GGNDANNTGFSNKRFGGSRHDELAAVIKQTQADVIGVQEDTSSDRLLTALGD 60

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
           N         +                + +   +  V+  ++   G    +         
Sbjct: 61  NWRRAGSIYSKYPLTPISVDRLPTVCRVHLPSGDSIVIVNTHWRPGPYGPYDIQK----- 115

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
              +  NG          +     D                 Q   D I     +    +
Sbjct: 116 --DIRQNGAPQNFDLWEQQILDGCDKNHGARG---------YQETVDTIQSYVAAGETVI 164

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPN---------------------------DSLIRFPK 239
           + GDFN   +         + +D                             D+      
Sbjct: 165 LTGDFNEPSHLDWTKRAAEQGLDRWVENPTHVPLRFAIAWRGSQMLEQAGMRDAYRTAFP 224

Query: 240 EKDSRCNANKNLRNKI--------------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           ++  +                          ID           +   +         +I
Sbjct: 225 DEVEKPGLTWTPTYPAGTPGRHPNADRVLDRIDMVYFTGANL-RVNDAAVVGESAAFSEI 283

Query: 286 KSRGKRLSDHCPISIDYD 303
              G+  SDH  + ++++
Sbjct: 284 VFPGEWPSDHRAVLVEFE 301


>gi|238854506|ref|ZP_04644844.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           jensenii 269-3]
 gi|282934100|ref|ZP_06339379.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           jensenii 208-1]
 gi|238832859|gb|EEQ25158.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           jensenii 269-3]
 gi|281301847|gb|EFA94112.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           jensenii 208-1]
          Length = 369

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/332 (11%), Positives = 88/332 (26%), Gaps = 61/332 (18%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKN------------------SVKRTTSDYTLLR 58
           T +  +   L ++N+   +     S + +                  S     +D     
Sbjct: 52  TLATNKTYTLTTYNVGFGAYNPKYSFFMDTGEMKNGAKTRGKYGTAVSKASELADTKGTI 111

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              K  + D  F QE+ + +   + F  N   +  +    +  S   + +  + A  +  
Sbjct: 112 ATIKKQNPDFAFFQEIDTNS--TRSFGVNQVKMAENAFDDMGSSFAQNFHSAYIAFPLNN 169

Query: 119 KNVRVLQQSY---PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF---CFLDS 172
            +                     +     ++        +   V+ + +K+      ++S
Sbjct: 170 PHGFARSGILALSKYHIDSSERRKYFVSSSLIEKFVDLDRCFNVMRLPVKNDKELVLINS 229

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------NYLGNNDD 223
             + Y        +Q   L   +  + +     +  GDFN            +    +D 
Sbjct: 230 HMSAYDKGGLSKKKQLALLNHVMKAEIQKGNYVICGGDFNHAFGTKYVAHFKSEQKQHDW 289

Query: 224 FWKTIDPNDSL-------IRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLI 271
               +   D              +    C  +             +D F++  N      
Sbjct: 290 L-AVLSQKDLASSGMRMITAQNADDVPTCRGSDIPYKKGVTYTTIVDGFLVSPN------ 342

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 + YN D   +      DH P+ + + 
Sbjct: 343 ---VQAVSYNIDTQFAYA----DHNPVKLSFS 367


>gi|218670459|ref|ZP_03520130.1| hypothetical protein RetlG_01772 [Rhizobium etli GR56]
          Length = 230

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 67/214 (31%), Gaps = 50/214 (23%)

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFC--FLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R  V L ++   + + VL +HLK+ C       E   +  C+ L +Q   L +WI 
Sbjct: 16  PRPVRGGVGLQIQRGNETVVVLSVHLKASCKRNDSEAERDQADDCATLMKQTDILSEWIR 75

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDF-------------------------WKTIDPN 231
            ++ +    ++AGDFNR++   G+                                I   
Sbjct: 76  TERAAGKKVIVAGDFNRQLLDTGDRVAAKLRAVDPGVQFYPTSRQCWASFPNRGAVIIAA 135

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE-------SFSEILYNEDD 284
            +                + ++   IDYFV+     +  I                  D 
Sbjct: 136 ANQKFPEIGAAGGRPLPYSPKSNSKIDYFVVSGPVSQTPISSEQYAMGREAKTTELATDY 195

Query: 285 IKSRGKR----------------LSDHCPISIDY 302
           +K+   +                 SDHCPIS+  
Sbjct: 196 LKTCEGKPNKFEDGSVLTFSEVEPSDHCPISMTL 229


>gi|326796392|ref|YP_004314212.1| endonuclease/exonuclease/phosphatase [Marinomonas mediterranea
           MMB-1]
 gi|326547156|gb|ADZ92376.1| Endonuclease/exonuclease/phosphatase [Marinomonas mediterranea
           MMB-1]
          Length = 344

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/341 (9%), Positives = 88/341 (25%), Gaps = 65/341 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------Y 77
            R+ ++N+   S      L     + T    + +R+  +    D++ L E+         
Sbjct: 4   FRVATFNV-AFSRTYSGELEAAIDRGTDKQVSAVRRIVERYSPDVLLLNEVDYSPNSLLK 62

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSK---------------------RDSNNDIHTAIAV 116
           + + ++   +    F        ++                         +      + +
Sbjct: 63  DKLMRLLSGSKKPPFRYVFFEPVNTGIPSGFDLDRDGIVGCEASDAWGFGSYPGQYGMML 122

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV-----------------------ELLVEIN 153
             +    +++S                  +                       ++ VE++
Sbjct: 123 LSRYPINIERSRTFRRFLWKDLPKAQLPTLGDGCDYYTPEELELFPLSSKSHWDVCVEVD 182

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-------QWLKDWITQKKESLVPFV 206
           G  I  L  H     F  +    +  +   ++            + D   +       FV
Sbjct: 183 GIPISFLCSHPTPPVFDGAERRNFHRNQDEINFWRYYLDGSSALVDDSGHKGGIENEHFV 242

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-----NKNLRNKIPIDYFV 261
           + GD N        +    + +  +  +      K    N             + +DY +
Sbjct: 243 VLGDLNASPYEGEASKTSIQALLSHSKIQMTELPKRLGWNPISNAAYHTASWGLGVDYVL 302

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +      +++       + + + +     SDH  +  D 
Sbjct: 303 PCKRLSP--VKQEVVWPDRHSETLFNDCLIASDHRMVYADL 341


>gi|262165968|ref|ZP_06033705.1| exodeoxyribonuclease III [Vibrio mimicus VM223]
 gi|262025684|gb|EEY44352.1| exodeoxyribonuclease III [Vibrio mimicus VM223]
          Length = 195

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 49/190 (25%), Gaps = 42/190 (22%)

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +    + +G K  +L+       F       +        Q  + L  ++ + + + 
Sbjct: 17  RMIMATFADEDGNKTTILN-----GYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSNT 71

Query: 203 VPFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
              V+ GD N                        ++     ++ +T+     +  F +  
Sbjct: 72  ESLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLMDWGLVDTFRQLH 131

Query: 242 DSRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               +       +           ID  +      +   +          D       + 
Sbjct: 132 PEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAETCQEAGI-------DYELRGIDKP 184

Query: 293 SDHCPISIDY 302
           SDH PI   +
Sbjct: 185 SDHAPIWATF 194


>gi|255554853|ref|XP_002518464.1| hydrolase, putative [Ricinus communis]
 gi|223542309|gb|EEF43851.1| hydrolase, putative [Ricinus communis]
          Length = 429

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/305 (9%), Positives = 69/305 (22%), Gaps = 53/305 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                +   +++S+N+           W             L    +    D++  Q   
Sbjct: 159 NPPIASSSFKILSYNV-----------WFREALEVHKRMKALGDIIQLHSPDVICFQ--- 204

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                            +   ++  H     +               + +        + 
Sbjct: 205 ----------------VFLCPQIPFHKHSIISIIDFPLTYCHFAFQELSKLQVRSFSCRP 248

Query: 136 SFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             +    R      +E+   K + V   HL+S C                  QA+   + 
Sbjct: 249 FNNSVMGRELCIAELEVPHSKPLVVATSHLESPCPAPPTW--DQMFSKERVDQAKEATNA 306

Query: 195 ITQKKESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +          +  GD N      G             +       +  +       + N
Sbjct: 307 L----SKNPNVIFGGDMNWDDKLDGQFPLPGGWVDAWAELRPGENGWTYDTKCNKMLSGN 362

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESF------------SEILYNEDDIKSRGKRLSDHCPI 298
              +  +D FV     +K    ++              + +  E  +       SDH  +
Sbjct: 363 RTLQKRLDRFVCSLRDFKISKIDTIGKEAIPGLSHIKEKKVRKEVKMLELPVLPSDHYGL 422

Query: 299 SIDYD 303
            +   
Sbjct: 423 LLTIS 427


>gi|134079677|emb|CAK97103.1| unnamed protein product [Aspergillus niger]
          Length = 572

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/315 (10%), Positives = 66/315 (20%), Gaps = 73/315 (23%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSK 103
             R    +  +    +   ADIV  QE  +   +    +     W  ++S       +S 
Sbjct: 10  PWRGKRTFDAMFDILE---ADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPRVKKGYSG 66

Query: 104 RDSNNDIHTAIAVR----------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
                   T   +R            N  V  +  P       +        +E+     
Sbjct: 67  VVIYTRNATCAPIRAEEGLSGMLCPPNSSVSFRELPENQQIGGYPTIEQLSQLEVDAATL 126

Query: 154 GKKIWVLDIHLKSFC--FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
             +   + +   +F    + S  N      S        +   I           + GD 
Sbjct: 127 DSEGRCVILEFPAFVLLGIYSPANRDESRDSFRRSFIDLMDARIRNLVAMGKRVFVTGDL 186

Query: 212 NRKINYLGN----------------------NDDFWKTIDPNDS------------LIRF 237
           N     +                             + +                 L   
Sbjct: 187 NISRGEIDAAHAGEAIRKGTLTEDEFVSTHARRVLNQLLSDGKVIGEREEGREQPVLHDI 246

Query: 238 PKEKDSRCNANKNL----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +                           IDY +   +  ++    +             
Sbjct: 247 CRSFHPGRKGMYTCWEQRINARPGNYGSRIDYVLCSLDMQEWFCDSNIQ----------- 295

Query: 288 RGKRLSDHCPISIDY 302
            G   SDHCP+   +
Sbjct: 296 EGLMGSDHCPVYAMF 310


>gi|72006271|ref|XP_782801.1| PREDICTED: similar to
           sphingomyelin/lysocholinephospholipid-phospholipase
           C-related [Strongylocentrotus purpuratus]
 gi|115956141|ref|XP_001187934.1| PREDICTED: similar to
           sphingomyelin/lysocholinephospholipid-phospholipase
           C-related [Strongylocentrotus purpuratus]
          Length = 438

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 93/342 (27%), Gaps = 53/342 (15%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           K + A    +     +    +R++++NI           +             +      
Sbjct: 80  KLLCASPPAVPLTNPTSVSTLRVLAYNIL-------EVPYPTWQCGQRERTCRIPHEVFR 132

Query: 64  LDAD--IVFLQEMGSYNAVAKV----------FPKNTWCIFYSTERLINHSKRDSNNDIH 111
           L  D  ++   E+      +            F      + +S             +  +
Sbjct: 133 LHPDLDVIVFNELFQGGCFSMFDPAIDSSVLNFRDILTQLGFSHFTENVGQPVQPPHLFN 192

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDS-FSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCF 169
               +  +   V   S+    A +S +     + AV   + +  GK +    I       
Sbjct: 193 GGTFIASRWPIVRNDSHVYTAADNSTWEYLAAKGAVYAEIIKTVGKSMMTYHIVGTHMQS 252

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFW--- 225
            D+       S  +  +QA+ ++  +  Q      P + AGD N         D      
Sbjct: 253 TDTP-----LSEKVRVKQAEEMRILMEMQNISPNAPVIYAGDLNVINGTSHGTDVIDMLN 307

Query: 226 --KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE------ 277
             +  +  + +  +   ++   N  + L +   IDY +   N  +               
Sbjct: 308 ATQPSNIGEYMYTYHGPENDLVNHTEYLNDTGWIDYVLYSNNHLQPTNASVEVVRPQLAE 367

Query: 278 -------------ILYNEDDIKSR--GKRLSDHCPISIDYDF 304
                        I    +    R   + LSDH  +   + F
Sbjct: 368 PIDICVSANELIPIYATSNRCLRRIQTRDLSDHFGVLGVFKF 409


>gi|107023983|ref|YP_622310.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|116691070|ref|YP_836693.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
 gi|170734404|ref|YP_001766351.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
 gi|254246936|ref|ZP_04940257.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           PC184]
 gi|105894172|gb|ABF77337.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|116649159|gb|ABK09800.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
 gi|124871712|gb|EAY63428.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           PC184]
 gi|169817646|gb|ACA92229.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
          Length = 271

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 80/310 (25%), Gaps = 68/310 (21%)

Query: 12  FLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +P     A   ++  VSWN++      G + W             +R + ++  AD+ 
Sbjct: 6   LSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWN-----------AMRDWMQSTHADVY 54

Query: 70  FLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           FLQE  +                 + V  V+      I  + +  I              
Sbjct: 55  FLQEAMARRMPRPMLAPGFGAPMDDTVDDVWHCQATEIAQALDWQIALGPNVFKPSWRHG 114

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+   +   L   + +        R   R  +     + G + + +L  HL        
Sbjct: 115 NAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGARPVTLLCAHLALT----- 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                    +   +Q  W+  WI +      P ++AGDFN   N           +    
Sbjct: 165 --------RAARLRQMHWIAHWIVRNAGDG-PLMLAGDFNDWRNDSV-------ALFGEI 208

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                    + +D   +                             L
Sbjct: 209 GLSEVATLLGESGRTFPAFSPALALDKMFVRG------------LTPLEWRAPSGEAAWL 256

Query: 293 SDHCPISIDY 302
           SDH P     
Sbjct: 257 SDHLPYIARL 266


>gi|256827653|ref|YP_003151612.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptobacterium curtum DSM 15641]
 gi|256583796|gb|ACU94930.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptobacterium curtum DSM 15641]
          Length = 373

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/330 (11%), Positives = 93/330 (28%), Gaps = 57/330 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKN------------------SVKRTTSDYTLL 57
            +         V++NI   +     + + +                  S +         
Sbjct: 53  TSLETDHTYTAVTYNIGFGAYTPDYTFFMDEGIMDDGTQTTGTQSRAVSKQSVEDCTAGS 112

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               K L+ D   +QE+ + +   + F  N    F         S     +    A  + 
Sbjct: 113 IAILKRLNPDFALIQEVDTDS--DRSFHVNQKQSFIEAFPSDGSSFVSDFHSAFLAYPLT 170

Query: 118 KKNVRVLQ------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
           + +  V        +++     + S+   G+  A    ++   + + +   +      ++
Sbjct: 171 EPHGAVESGLLTLSRAHISSAVRRSYPVDGSFPAKYFDLDRCFEVMRIPVQNGHDLVLIN 230

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT---- 227
           S  + Y     + +QQ   + + +  + ++    +  GD+N  +    +     +     
Sbjct: 231 SHMSAYDKGGKIRAQQLALIGNIMKAEYDTGNYVICGGDWNHALAGSEDIYPSKQQVPPW 290

Query: 228 ---IDPNDSLIRFPKEKDSR------CNANKNLR-----NKIPIDYFVMDQNAYKFLIQE 273
              +D  D    F   K         C                +D F++  N   +    
Sbjct: 291 VSILDDADLPTGFSIVKADNLSEVASCRGCDIPYEKGVTYTTTVDGFIISDNVQAYAEN- 349

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          G   SDH P+ + ++
Sbjct: 350 ------------IDCGFTYSDHNPVKLTFE 367


>gi|114775670|ref|ZP_01451238.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Mariprofundus ferrooxydans PV-1]
 gi|114553781|gb|EAU56162.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Mariprofundus ferrooxydans PV-1]
          Length = 263

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 79/303 (26%), Gaps = 67/303 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++ N+N +        W               ++    DADI+ LQE         +
Sbjct: 1   MKIITANLNGIRSATRKGFW---------------EWFAAQDADILCLQE---------L 36

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S  +  +     +    ++ +A+  +                +     + 
Sbjct: 37  KAHIHQLPPESLLKDYHRHYHFAQKPGYSGVALYSRKQPDTVHVGLGSIDPATDWSRFDA 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++   +   + V+  +  S       +       +      +     IT+ K+   
Sbjct: 97  EGRFVM--TDFGTLSVISAYFPSGSGTPERQ-------AGKMVFLEQFLPLITRLKDQGR 147

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSRCNANK 249
             +I GD N     +   +      +               N   +   ++         
Sbjct: 148 ELIICGDINIAHRNIDLKNWRGNRKNSGFLPEERAWFDQCLNAGFVDLFRQLYPEREQYS 207

Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              N+           IDY +  Q       + S                  SDH P++ 
Sbjct: 208 WWSNRGQARANNVGWRIDYHLCTQKTAATACEVSV-----------FTDAWFSDHAPVTA 256

Query: 301 DYD 303
           +++
Sbjct: 257 NFN 259


>gi|328779825|ref|XP_395873.4| PREDICTED: protein angel-like [Apis mellifera]
          Length = 558

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 62/203 (30%), Gaps = 11/203 (5%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKR--TTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +R++S+NI    L E       ++  +         LL +      A+++ LQEM   + 
Sbjct: 175 LRVLSFNILAQYLLETYRFLYKEHDKQALCWEIRRQLLLEEILAAQANVICLQEMQEEHL 234

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              + P      F        + +R ++             + ++  S   L        
Sbjct: 235 EEFLIP------FKELGYNYLYKRRTNDKKDGLLFLYHSDQLTLIDYSKVELYQSGIELL 288

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           + +   +   + +       L I      +     +       LL  + + +        
Sbjct: 289 SRDNVGIIAKLAVKKNPQIQLVIATTHLLYNPRRNDVRLGQTQLLLAEIERVAFLENTMT 348

Query: 200 ESLV-PFVIAGDFNRKINYLGNN 221
            S   P ++ GDFN + +     
Sbjct: 349 GSKYLPIILMGDFNLEPHSGVYK 371


>gi|71480111|ref|NP_001025131.1| protein angel homolog 2 [Danio rerio]
 gi|82077818|sp|Q5RGT6|ANGE2_DANRE RecName: Full=Protein angel homolog 2
 gi|55962530|emb|CAI11673.1| novel protein similar to human KIAA0759 [Danio rerio]
          Length = 569

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 61/217 (28%), Gaps = 16/217 (7%)

Query: 23  KVRLVSWNINT----LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI +                 V    + +  + +  +   ADI+ LQE+   +
Sbjct: 198 DFSVMSYNILSQDLLCDNTYLYRHCNPPVLDWRNRFPNIIKELEQYSADIMCLQEVQEDH 257

Query: 79  AVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              ++        +   +     +                V    V   ++  PL+   +
Sbjct: 258 YKQQIKPSLESLGYHCEFKRRTGLKPDGCAVIFKRERFSLVSCHPVEYFRRGVPLMDRDN 317

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R    +   ++   I V + HL                 + L+     +    
Sbjct: 318 VGLIVLLRP---IDPHVSLSNICVANTHLLYNP------RRGDIKLAQLAMLLAEISRVS 368

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                S+ P ++ GDFN             + +D + 
Sbjct: 369 QLPDSSVCPVLLCGDFNSVPWSPLYRFIKDRRLDYDG 405


>gi|255014286|ref|ZP_05286412.1| hypothetical protein B2_10271 [Bacteroides sp. 2_1_7]
          Length = 268

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 72/272 (26%), Gaps = 38/272 (13%)

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
              +  +    DIV +QE         ++ ++     +  E   +      N      I 
Sbjct: 12  QTAKVIEASQTDIVGIQE-------GHIYEEDGIKHDHVPEIAESLGFHLFNQGEGHYIL 64

Query: 116 VRKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            R   V      Y   +   KD F    N     +      +   +  I    + F+D+ 
Sbjct: 65  SRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYI----PYQPYQLNGIPYGDYPFIDTE 120

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------- 223
           E     +     ++    +  I Q  +   P  + GDFN                     
Sbjct: 121 EEAVWFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEPSFLDWTQRAADAGIHKIKV 180

Query: 224 ------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQ 272
                  +  I  NDS      ++ S                  +D+ +         + 
Sbjct: 181 EWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILDRLDFVLYSG----CKVT 236

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +SF                 SDH  ++  ++F
Sbjct: 237 DSFITGESEATSDVVVSPYPSDHRMVTSCFNF 268


>gi|66910408|gb|AAH97053.1| Apex1 protein [Danio rerio]
 gi|197246969|gb|AAI64240.1| Apex1 protein [Danio rerio]
          Length = 296

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 73/304 (24%), Gaps = 87/304 (28%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  +++ SWN++ L      +               +R+  K L ADI  + E       
Sbjct: 52  AANMKITSWNVDGLRAWVKKNG-----------LDWVRKE-KALPADITGMPE------- 92

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                               +     + + ++ +A+  K   +        G        
Sbjct: 93  ----------------YPHKYWAGSEDKEGYSGVAMLCKTEPLNVT----YGIGKEEHDK 132

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     ++       +++  ++ +        +               L        +
Sbjct: 133 EGR-----VITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGL--------D 179

Query: 201 SLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +  P V+ GD N                         + +  +        F +    + 
Sbjct: 180 ARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQA 239

Query: 246 NANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            A                  +DYFV+       L                      SDHC
Sbjct: 240 YAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNT-----------AMGSDHC 288

Query: 297 PISI 300
           PI++
Sbjct: 289 PITL 292


>gi|325926386|ref|ZP_08187712.1| putative secreted protein [Xanthomonas perforans 91-118]
 gi|325543219|gb|EGD14656.1| putative secreted protein [Xanthomonas perforans 91-118]
          Length = 434

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 73/306 (23%), Gaps = 40/306 (13%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           + L    V    S    + ++++N+  L E    S    +                    
Sbjct: 15  VTLACAGVAHAQSSVGVLDVLTYNVAGLPEGISSSNPATNTPLLAPKLAPYA-------- 66

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
            +V +QE  +Y+A       + +    S               I   +            
Sbjct: 67  -LVHVQEDFNYHAALYAGDNHPYRTPTSG-----------GAAIGDGLNTLSNYPFNDFT 114

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                    +        +   L   NG  + V + H  +           +   +    
Sbjct: 115 RVTWDKCNGTDCLTPKGFSYMQLRLDNGVLLDVYNAHPNAGT--------ETADLAARRA 166

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTIDPNDSLIRFP 238
               L  +I     +    ++  D N +             +N+     ++         
Sbjct: 167 NISQLSQFIGTW-SAGNAVLVMMDSNTRYTRSEDNIRELIASNNLIDPWVELIKGTAPAA 225

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 C           +D  +        L    +       +   S GK LSDH P+
Sbjct: 226 GAAPLLCGTPPT-NTCEVVDKILYRAAPQLTLAANRYQLDP--GNFYDSAGKPLSDHYPL 282

Query: 299 SIDYDF 304
              + +
Sbjct: 283 YTQFGW 288


>gi|290990271|ref|XP_002677760.1| mRNA deadenylase [Naegleria gruberi]
 gi|284091369|gb|EFC45016.1| mRNA deadenylase [Naegleria gruberi]
          Length = 379

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 86/355 (24%), Gaps = 76/355 (21%)

Query: 24  VRLVSWNI-----------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD------- 65
             ++++NI              S  E   +  +   R    +  ++ Y    D       
Sbjct: 27  FTILTYNILAQMYAKRLDMEPFSNIENYEMITSWSYRRKRLFREIKSYGMANDKQQHQEM 86

Query: 66  ADIVFLQEMGSYN-AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            +I+  QE  +Y     K            TE+    +   +       + +   ++ + 
Sbjct: 87  PEIICFQECDNYQKYWRKKMNNKLNMYSTYTEKRGKRNGCATFWRTDRFVEIAHLDLDLA 146

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             S  +   K++    G R    L +         L I      +              +
Sbjct: 147 NLSDLIDKGKETNYMYGRRDTANLTLLQCKLSSKYLLIINNHLAWDPEYPQVKLSQMFYI 206

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--------DFWKTIDPNDSLIR 236
            QQA  +         S V  V+AGDFN   N    N            K +  N     
Sbjct: 207 LQQAYNMIQ--PYNSSSTVSVVLAGDFNSLPNSEVYNLIVEGQAVVPTAKPLSFNSDCNI 264

Query: 237 FPKEK--------------------------------------DSRCNANKNLRNKIPID 258
           F +                                        +     N N      +D
Sbjct: 265 FTEASVVTSGKTSQQHGNSKKGVEQVMFNPFGKFKSCYREVRGNEPSFTNYNNGFSGTLD 324

Query: 259 YFVM---------DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Y                    + ++ +E   +E          SDH P+     +
Sbjct: 325 YIFTVDLGQQQDKSGQLVCTRVLDTITEEQASEHKCLPSLTFPSDHIPLVASLTW 379


>gi|301102598|ref|XP_002900386.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262102127|gb|EEY60179.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 453

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 16/206 (7%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +++ ++S NI    E      W  +         LL +       D+V LQEM       
Sbjct: 6   ERLAVLSLNIFCRPEGIHSGQWFKTGDYKDLRVALLLRKMTKF--DVVILQEMFEAGPRQ 63

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K F +  + + +         +   +  I   + +  +   V +          S     
Sbjct: 64  KRFVREAYAMGFRYHCGSVWPRLLDSRLIDGGLLILSRYPIVERDQLAYSQGAGSDG-IC 122

Query: 142 NRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            +  +   ++++      + V   H ++               S+   Q Q +  ++ + 
Sbjct: 123 AKGVLYARIQLSPDLSDSLHVFTTHTQAG--------DNYKDYSIRLAQIQEMHRFVART 174

Query: 199 K--ESLVPFVIAGDFNRKINYLGNND 222
              +  VP +I GDFN    +   +D
Sbjct: 175 IRDDPGVPVLITGDFNLDARHDLVHD 200


>gi|90408568|ref|ZP_01216724.1| putative endonuclease/exonuclease/phosphatase family protein
           [Psychromonas sp. CNPT3]
 gi|90310322|gb|EAS38451.1| putative endonuclease/exonuclease/phosphatase family protein
           [Psychromonas sp. CNPT3]
          Length = 517

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/365 (11%), Positives = 91/365 (24%), Gaps = 94/365 (25%)

Query: 1   MIRKYVLALVFFLVPCTASVA----------------QKVRLVSWNINTLSEQEGVSLWK 44
           M +  V  ++  L+      +                +   +++ N+      +     +
Sbjct: 1   MKKTLVATIIISLLMTGCDSSSETNGSHKDEPPTLEHKTFTVLTANVWNELSHDAKDAVE 60

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIFYSTERLINHSK 103
           N   +            KN  AD++ LQE G  +A +A+      W              
Sbjct: 61  NPDGKIAYLLA--VDEMKNSKADVILLQESGGTSARLAEDLNMYLWQ------------- 105

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
               +D     A+  K                     GNR  V + + ++G+ + V   H
Sbjct: 106 ---GSDFIPDTAILSKYPITEVFDNENKSISRDDLSRGNRENVGVKLSVDGRDVIVWANH 162

Query: 164 LKSFCFL----------------------DSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           L    ++                      D+ E       S    Q   + + +    +S
Sbjct: 163 LDYTHYVNYEARGGNGMTWKARKNCLAITDTDELDRKEMASERPAQISRVIENVKPFIDS 222

Query: 202 LVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCN 246
               +I GDFN                      + +   + ++   +        D   +
Sbjct: 223 DTLVIIGGDFNESSGVDWTAETTDMFDHKGVIYDYETHKRLLNAGLTDSYREIYGDPVSH 282

Query: 247 ANKNLRN----------------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                                        +  ID+   +       +        Y+++ 
Sbjct: 283 PGITWPYNNEDSYTDARSYILECGRALDDRDRIDFIYYNAQVAGVTLSHVAVVGPYSKEF 342

Query: 285 IKSRG 289
            KS  
Sbjct: 343 FKSVD 347


>gi|152965142|ref|YP_001360926.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
 gi|151359659|gb|ABS02662.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
          Length = 257

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 82/307 (26%), Gaps = 79/307 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-------- 75
           +R+ S N          +     +     D  +L      LDAD+V +QE+         
Sbjct: 3   LRIASVN----------AASGRDLASGAVDTFVLTTAVAALDADVVAVQEVDHLLPRSAR 52

Query: 76  -SYNAVAKVFPKNTWCIFYSTERLIN------HSKRDSNNDIHTAIAVRKKNVRVLQQ-- 126
               A+      ++     +             ++R   ++    +A+  +   +  +  
Sbjct: 53  ADQTALLAAATGSSGRFVATVHGTPGVVDGFTPAERTVPDEPSYGVALLSRLPVLEWREE 112

Query: 127 ---------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                      P+ G    +     R  V  +V      + VL  HL             
Sbjct: 113 RMAPGRARLPLPVPGQGLRWIPDEPRAVVAAVVATAAGPVSVLGTHLSF----------- 161

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             S +    Q + ++ +  +      P V+ GD N     +                   
Sbjct: 162 --SPARSVAQLRAVRRFAAELP---RPLVLLGDLNLPPGVVRR---------------VL 201

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           P               ++ +D+ + D    +  +      +              SDH  
Sbjct: 202 PWRALVTGPTFPAPAPRVQLDHALADGLPAEARVSARIERV------------GGSDHRG 249

Query: 298 ISIDYDF 304
           + +D  F
Sbjct: 250 VVVDLTF 256


>gi|134108925|ref|XP_776577.1| hypothetical protein CNBC0700 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259257|gb|EAL21930.1| hypothetical protein CNBC0700 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 1319

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 85/304 (27%), Gaps = 35/304 (11%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +WN+N  +  E +  W         D  ++  Q    L A     Q + +  A  +++ K
Sbjct: 629 TWNLNGKAPNEALDSWLFPPDTPEPDIYMIAFQEIVELTA----GQILQTDPAKKRMWEK 684

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                F   +   +        D     A    V+K  V  ++              +GN
Sbjct: 685 FIMDTFAMRKGGKDSDYVLFRGDQLVGTALIIVVKKHLVPHIRNVESATKKTGLQGLSGN 744

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC----SLLSQQAQWLKDWITQK 198
           +  V + + +    +  +  HL +        N    +       L  +     DW    
Sbjct: 745 KGGVAIRLNLYDSTVCFVTCHLAAGHSNVGDRNADWRTVVGGTRFLRGKVIEDHDWWEAD 804

Query: 199 KESLVPFVI-AGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEK 241
           +      +I A DFN +++                     D   K +D  +  + + +  
Sbjct: 805 EHLGHRIIIWAADFNYRVSLPNLEVRDLVKANSLDALLGADQLLKAMDAGEVFMGYDEGP 864

Query: 242 DSRCNANKNLRNKIPIDYFVMD--QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  K        D       Q    +  +  F        +        SDH P+ 
Sbjct: 865 IRFPPTYKYDNGTDSYD---TSEKQRIPAWTDRVLFKGSALRLHEYTRAELMTSDHRPVY 921

Query: 300 IDYD 303
             ++
Sbjct: 922 AVFE 925


>gi|242057995|ref|XP_002458143.1| hypothetical protein SORBIDRAFT_03g027610 [Sorghum bicolor]
 gi|241930118|gb|EES03263.1| hypothetical protein SORBIDRAFT_03g027610 [Sorghum bicolor]
          Length = 872

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 62/231 (26%), Gaps = 21/231 (9%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSV--KRTTSDYTLLRQYAKNLDADIVFLQ 72
               A++ +++S+NI  + L+++      +              L         DI+ LQ
Sbjct: 178 PPHQAERFKVLSYNILADYLAQEHQFLYERIPSFILDWNWRKDKLLFEFGLWSPDILCLQ 237

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+  +  + +      +              R  +     AI  R    ++  +      
Sbjct: 238 EVDKFTDLEQEMASRGYN--------GTWKIRTGDAADGCAIFWRTTRFQLRYEEDIEFN 289

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF-------LDSLENTYSPSCSLLS 185
                        +E +V  N +          +           +           +  
Sbjct: 290 KLGLRDNVAQLCVLESVVPQNVQTDSTSLSTSSNDPQQAKQVVICNIHVLYNPKRGDIKL 349

Query: 186 QQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
            Q + L D      +  +  P ++ GDFN             + ++ +   
Sbjct: 350 GQVRTLLDKAYTLSKMWNNAPVILCGDFNSTPKSPLYKFMLEQKLNLSGLA 400



 Score = 45.3 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/81 (11%), Positives = 24/81 (29%)

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   +               + N +    +DY    +  +   + ++F + +  + 
Sbjct: 790 LRSVYTDVEDFDGTKDASKEPLVTSYNRKFMGTVDYIWASEGLHTVQVLDTFPKEILKQT 849

Query: 284 DIKSRGKRLSDHCPISIDYDF 304
                 K  SDH  ++ +  F
Sbjct: 850 IGFPTKKWGSDHIALACELAF 870


>gi|296804272|ref|XP_002842988.1| ap endonuclease [Arthroderma otae CBS 113480]
 gi|238845590|gb|EEQ35252.1| ap endonuclease [Arthroderma otae CBS 113480]
          Length = 574

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 63/299 (21%), Gaps = 71/299 (23%)

Query: 64  LDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKN 120
           L+AD+V  QE  +   +    +     W  ++S   +   +S            A+R + 
Sbjct: 5   LEADVVIFQEAKIQRKDLQDDMVLVPGWDCYFSLPRQKKGYSGVVIYTRSSKCAAIRAEE 64

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-----------INGKKIWVLDIHLKSFCF 169
                   P    +     A  +      +E               +   L +   +F  
Sbjct: 65  GITGTLCPPNSSTQFRHLPASEQIGGYPTIEQMEELSEIDPVALDSEGRCLILEFPAFVL 124

Query: 170 LDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------- 216
           +                      L   +    +     V+ GD N               
Sbjct: 125 IGVYCPANRDESRDGFRLGFLNILDARVRNLIKMGKRVVLTGDLNISPAPIDSAPATERI 184

Query: 217 -----------YLGNNDDFWKTIDPNDSLIRFP-------------KEKDSRCNANKNL- 251
                             F   +    S                  +    R        
Sbjct: 185 RKSAETEEEYISSPARCLFNTLVRRVGSTGDADNVETPPVLRDLCREFHPHRTGMYTCWE 244

Query: 252 --------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                        IDY +   +   + ++ +              G   SDHCP+    
Sbjct: 245 QRVNARPGNYGSRIDYILCSDDIRHWFVESNIQ-----------EGLMGSDHCPVYASI 292


>gi|45198534|ref|NP_985563.1| AFR016Wp [Ashbya gossypii ATCC 10895]
 gi|44984485|gb|AAS53387.1| AFR016Wp [Ashbya gossypii ATCC 10895]
          Length = 558

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/362 (10%), Positives = 81/362 (22%), Gaps = 102/362 (28%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R V++N+N L    G   +             L Q  +   +D++  QE+ +       
Sbjct: 42  LRFVTFNVNGLRTLFGHYPFSRMSNS-------LAQVFEYFKSDVITFQELKTDKLAIPR 94

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----------------------VRKKNV 121
           +        + T              I    A                      ++K   
Sbjct: 95  WGMVDGYYSFITIPSKKKGYSGVGCWIRIPEAADPLRLSLQVLKAEEGITGRLKIKKDGA 154

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV---LDIHLKSFCFLDSLENTYS 178
            V     P +G            A    ++  G+ + V     + + S     +  N   
Sbjct: 155 LVAYCEDPTIGIGGYDGLPYGSDANAQELDSEGRCLLVELACKVVVISVYCPANSMN-TE 213

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------------ 220
                  +  + L   +   +      V+ GD N   + + +                  
Sbjct: 214 EGEVFRLRFLKTLFKRVRNIENLGKRVVLMGDLNVCRDLIDHASCITRNNIKINPDCDGA 273

Query: 221 ---------------------NDDFWKTIDPNDSLIRFPKE------------------K 241
                                     + +  +       K                    
Sbjct: 274 VLERIYQEEAREFIYEPLRIGRRLLNEMLIDSIIPDLAEKGVLIDSTRYAQGRKRLKMYT 333

Query: 242 DSRCNANKNL-RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 N         +DY ++ +   + + +      +             SDHCP+  
Sbjct: 334 VWDTYRNSRPANYGSRVDYILVSKALKEGVKKADIWAKV-----------MGSDHCPVFT 382

Query: 301 DY 302
           D 
Sbjct: 383 DL 384


>gi|332522369|ref|ZP_08398621.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           porcinus str. Jelinkova 176]
 gi|332313633|gb|EGJ26618.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           porcinus str. Jelinkova 176]
          Length = 275

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 76/280 (27%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF------------------- 92
                L ++      D++ LQE+            + +                      
Sbjct: 19  KKLFDLAEHILAEKYDVICLQEVNQLIESDLATEDSFYQKIPGTPSLHKDNFALLLTNYL 78

Query: 93  ---YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +     + +  K    +     L+ A D       RR +   
Sbjct: 79  AKRGQPYYWSWAYNHIGYDIYKEGVVILSKKPMRV--RGILVTAIDDEYDYHTRRVLLAK 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            E++G+++ +  +HL  F                  ++   L+  +       +P V+ G
Sbjct: 137 TEVDGREVALASVHLSWFGKG-------------FEEEWSMLEQSLQNL---NLPLVVMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           DFN   +  G N     ++   DS              S  +  +  R    +D+  M Q
Sbjct: 181 DFNNPTDSKGYNMILRSSLGLRDSHKEAEIVFGDHSIVSDIDGWEGNRYSFKVDHAFMSQ 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     F+               +SDH  +S++  +
Sbjct: 241 E---------FNISRSEITFEGGDAPVVSDHYGLSVEASW 271


>gi|298377937|ref|ZP_06987886.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_19]
 gi|301311408|ref|ZP_07217335.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 20_3]
 gi|298265181|gb|EFI06845.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_19]
 gi|300830494|gb|EFK61137.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 20_3]
          Length = 343

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/354 (10%), Positives = 88/354 (24%), Gaps = 67/354 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R   + LV  ++    S  ++++++ +NI           W             +    
Sbjct: 1   MRSVFILLVAVVMTACQSSRKELKVLQFNIWQEGTSVENGYWG------------IVDNI 48

Query: 62  KNLDADIVFLQEMGSYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
             L  D++   E+ +YN ++ +        K     +           +           
Sbjct: 49  VELSPDLITFSEVRNYNGISFISRLVTDLEKRGMRYYGKESVSTGILSKYEIQSQEVVFP 108

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           ++     V++  + + G +     A             G          +    +DS+  
Sbjct: 109 LKNDRGSVIKAMFQIEGEEIVLYSAHLDWMNCSYYLPRGYDGCTWKKMKQPVVDVDSILA 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------GNNDDFWKTID 229
               S      + + + +   +++E     +I GDFN   +           +     ++
Sbjct: 169 DNKASF--RDDEVRAIVEDARKEREHGRIVMIGGDFNEPSHLDWQADTKDIREHRGMVVN 226

Query: 230 PNDSLIRFPKEKDSRC-----NANKNLRN----------------------KIPIDYFVM 262
            + S I               N                             +  ID+   
Sbjct: 227 WDCSKILIEDGYKDTFREIYPNPVIYPGFTFPTNNIEVDLKKLTWAPEADDRERIDFIYY 286

Query: 263 DQNAYKFLIQESF--------------SEILYNEDDIKSRGKRLSDHCPISIDY 302
             N    L                    +    +  I   G   SDH  +   +
Sbjct: 287 YPNKAVALKDVRIVGAEGAVLYGERIERDKDSQDSFIAPAGTWPSDHKALLATF 340


>gi|293572282|ref|ZP_06683281.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E980]
 gi|291607741|gb|EFF37064.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E980]
          Length = 276

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 83/298 (27%), Gaps = 42/298 (14%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLR-----QYAKNLDAD---IVFLQEM 74
           ++ ++ N +  L  +    L + + K    DY ++      Q  ++ +AD   ++    +
Sbjct: 1   MKFMTLNTHSWLEPEPDKKLQELADKILLEDYEVIALQEINQLLESEEADPAKLMKFCPV 60

Query: 75  GSYNAVAKVFPKNTWCIFYST----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
            +   + K                             +      A+  K    L+     
Sbjct: 61  ENQVPIRKDNFAYCLVQLLKEQGKEYFWSWEMSHIGYDKYEEGNALLAKRP--LESQVLT 118

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           +           R+ +    +I+ + I+V   H   +    S       +      + + 
Sbjct: 119 VSESQKKEDYRTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFFETRA 178

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
                        P    GDFN   +  G +      +   DS +   ++  +       
Sbjct: 179 -------------PLFFLGDFNNPADSEGYHIVKESGLLLQDSYVIANEKGKAATVEKKI 225

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +    K+ ID+  +          E      Y           +SDH    I+ D
Sbjct: 226 DGWEQNTEKLRIDFIFV---------PEGVRVKKYQRIFDGIDSPIISDHYGAEIEID 274


>gi|312888614|ref|ZP_07748183.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM
           18603]
 gi|311298928|gb|EFQ76028.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM
           18603]
          Length = 390

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 84/315 (26%), Gaps = 52/315 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKVF 84
           L +WNI      +          R    Y  + +       D++ +QE+  +  A+ KV 
Sbjct: 43  LATWNIREFGGTKYGG-------RLDESYYYIAEIISKF--DLIAIQEVRDNLAALDKVM 93

Query: 85  PKN-TWCIFYSTERLINHSKR--------DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               ++  +  T+                D+       +A +     + ++         
Sbjct: 94  EILGSYWSYMFTDVTEGREGNSERTAFLFDTRKVRFGGLAGQLVLPPLEEKDPESGQTIY 153

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              +   R       +       +  +H+     + +          L    AQ + +  
Sbjct: 154 KPVKQLARTPFLCGFKAGWTNFTLTTVHILYGDSVGNNPARIKEIEDL----AQMIANKA 209

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRFPKEKDSRCN------- 246
            +K       ++ GDFN         +   K     P +          ++         
Sbjct: 210 AEKTAWSHNMILLGDFNIFKREDHTYEAITKAGFTTPEELQKLPSNALKNKFYDQIAFKV 269

Query: 247 ---ANKNLRNKIPIDYF--VMDQNAYKFLI-------------QESFSEILYNEDDIKSR 288
                +        DYF  +   +                   +    +    +   K+ 
Sbjct: 270 RPGRFETTDKAGVFDYFESIFKDDLQDETEYAEAMGKAYLQNSEGIARDEKGKKAYYKTY 329

Query: 289 GK--RLSDHCPISID 301
            +  ++SDH P+ ++
Sbjct: 330 WRTFQMSDHLPMWVE 344


>gi|260782463|ref|XP_002586306.1| hypothetical protein BRAFLDRAFT_109077 [Branchiostoma floridae]
 gi|229271408|gb|EEN42317.1| hypothetical protein BRAFLDRAFT_109077 [Branchiostoma floridae]
          Length = 370

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/330 (10%), Positives = 84/330 (25%), Gaps = 53/330 (16%)

Query: 20  VAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +Q   +VS+NI        +            ++    L    + L+ DIV LQE+G+ 
Sbjct: 31  QSQNFSVVSYNILADCHVTPQTYPYCPEEYLPMSARQRQLEAELRYLNGDIVCLQEVGTT 90

Query: 78  NAVAKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAV--------RKKNVRVLQQ 126
                + P      +  F   E+++   +  +     +  +V          K   +++ 
Sbjct: 91  YYNESLLPMMQKQGYDGFRFKEKVLGTPEGVATFFRTSRFSVVDFASFDFNSKFKELIKS 150

Query: 127 SYPLLGAKDSFSRAGNRRAVE---LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                     +        +    L  +  G+++ V  +H+  +  L      +      
Sbjct: 151 HVGESERGYVYKYLEKSSVMMMCKLRCKETGREVSVGMLHVIWWMGLIPSAPQHVEVDVQ 210

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------- 236
             Q +  + + +        P ++ GDFN               +      +        
Sbjct: 211 SLQISVAMNELVKFAGGVDQPHILCGDFNSSPFSPAYGILTRGYLGGGGYEMFRALRPFK 270

Query: 237 -----------------------------FPKEKDSRCNANKNLRNKIPIDYFVM-DQNA 266
                                           +       + +      +DY      + 
Sbjct: 271 VSDDESKCLIELLPTSVFSHPSKSLKSAYAEVKGKEPDFTDYDGAFVECLDYIWYSSDSV 330

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
               + ++  E               SDH 
Sbjct: 331 RVTEVLDTVPESAITPLTGCPNRVFPSDHL 360


>gi|291239611|ref|XP_002739716.1| PREDICTED: apurinic/apyrimidinic endonuclease 2-like [Saccoglossus
           kowalevskii]
          Length = 541

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/353 (10%), Positives = 80/353 (22%), Gaps = 107/353 (30%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79
           +R+++WNIN                   +    L+    +L+ADI+ LQE        + 
Sbjct: 1   MRILTWNING----------------IRAAKKPLKSLLDSLEADIICLQETKVTRDQLDE 44

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------------ 127
              V         +S  R          ++  T +A  +    +L  S            
Sbjct: 45  ANAVVEGYNSYFSFSKGRQGYSGVATFCHNDFTPLAAEEGLSGILSSSAGNEVVGNYGNQ 104

Query: 128 YPLLGAKDSFSRAGNRRAVEL-LVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                 +        R  + L  ++ +    + + +++++       D          + 
Sbjct: 105 TDFTDEELRSLDNEGRALLSLHKIKSSAGKNEDVVIINVYCPRCEPDD------QERLNF 158

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------LGNNDDFWKTI----- 228
             +    L+        +    ++ GD N                       + +     
Sbjct: 159 KLRFYSLLQTRCEALLSAGRHVIVVGDMNVSHKAIDHCDAAVNPTKPRQWMDQFLCKLSD 218

Query: 229 ------------------------------DPNDSLIRFPKEKDS-----RCNANKNL-- 251
                                              +  F            C        
Sbjct: 219 MGEIIDKTSEVNHLIGAVGISPEKVSNYSQSTGSFVDTFRHFHPQQQEAFTCWRTTTGAR 278

Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  IDY +   +    L+                     SDHCP+ +  
Sbjct: 279 QLNYGTRIDYILASMSLQVELLDSIIM-----------PNVEGSDHCPVKVTL 320


>gi|148664807|gb|EDK97223.1| deoxyribonuclease I, isoform CRA_c [Mus musculus]
          Length = 245

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 67/239 (28%), Gaps = 22/239 (9%)

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           +  QE  S       FP +          +     R S  + +     R   V +L    
Sbjct: 21  IRCQEAPSMVKKYLWFPLSRDKPDTYRYVVSEPLGRKSYKEQYL-FVYRPDQVSILDSYQ 79

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
              G +   +   +R    +       ++    I                 + +    + 
Sbjct: 80  YDDGCEPCGNDTFSREPAIVKFFSPYTEVQEFAIVPLH------------AAPTEAVSEI 127

Query: 189 QWLKD-WITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             L D ++   ++      +  GDFN   +Y+ ++      +  +        +      
Sbjct: 128 DALYDVYLDVWQKWGLEDIMFMGDFNAGCSYVTSSQWSSIRLRTSPIFQWLIPDSADTTV 187

Query: 247 ANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302
            + +       D  V+     +  ++  S     +  +   S    + +SDH P+ +  
Sbjct: 188 TSTHCAY----DRIVVAGALLQAAVVPNSAVPFDFQAEYGLSNQLAEAISDHYPVEVTL 242


>gi|20502719|gb|AAM22579.1|AF390107_1 RgfB [Streptococcus agalactiae]
          Length = 271

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 74/279 (26%), Gaps = 54/279 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST---------------- 95
                L ++      DI+ LQE+    +         +     T                
Sbjct: 19  KKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYL 78

Query: 96  ------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+       L+ +  L+ A D  +    RRA+   
Sbjct: 79  NLQGLHYHWTWAYNHIGYSKYHEGVAILSLKP--LKPNDILVSAVDDETDYHTRRALVAE 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
             +N K + V+ +HL  F                    A+  K   T   E   P ++ G
Sbjct: 137 TTLNDKVVTVVSLHLSWFEKG----------------FAEEWKRLETTLLEVETPLLLMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN      G        +   DS                 +  +  +  + +D+    +
Sbjct: 181 DFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSE 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +      Q  F                +SDH  + I  +
Sbjct: 241 DLSISSSQLVFEGGEAPV---------VSDHYGLEITLN 270


>gi|261755331|ref|ZP_05999040.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 3 str. 686]
 gi|261745084|gb|EEY33010.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 3 str. 686]
          Length = 212

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 66/193 (34%), Gaps = 24/193 (12%)

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117
                ADI+ LQE+ +  A+        + +     R       + +  I  A+ +R   
Sbjct: 6   IAETRADILCLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSCGIDVAVMMRDTT 65

Query: 118 ---KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKIWVL 160
              +        S+  L   D                 R   R  + + + I G+ + + 
Sbjct: 66  RDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLSLF 125

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNRKIN 216
             HLKS     + ++  + S  +   +A+ ++  I +K      +   ++I GDFN    
Sbjct: 126 VAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDYRE 185

Query: 217 YLGNNDDFWKTID 229
            +    D W   +
Sbjct: 186 RILIGGDEWNGYE 198


>gi|168021087|ref|XP_001763073.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685556|gb|EDQ71950.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 347

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/340 (11%), Positives = 76/340 (22%), Gaps = 87/340 (25%)

Query: 26  LVSWNIN---TLSEQEGVSLWKNSV--KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +VS+NI              W          +    L +       DI+ LQE+  Y  +
Sbjct: 5   IVSYNILADVNARAHWDELYWHIPPFIMDWDARKKKLLRELALWSPDIMCLQEVDHYEDL 64

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +      +   Y++    +            A+  RK    +L++              
Sbjct: 65  NEELESKGYVGVYTSRTGASTDG--------CAMFWRKNRFELLEEECIKFN-------- 108

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                      +      +  +        ++          +   QA+ L +      E
Sbjct: 109 --------EFNLRDNVAQLCVLWNNCVVVGNTHLLFNPKRGDVKLGQARVLLEKAHAISE 160

Query: 201 S--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR------CNANKNLR 252
                P  IAGDFN               +D      R    ++         NA     
Sbjct: 161 KWGNAPVAIAGDFNSTPWSALYRFMSCSQLDLAGHDRRNISGQEEGAKERFKTNAYSRWD 220

Query: 253 --------------------------------------------------NKIPIDYFVM 262
                                                              +  +DY   
Sbjct: 221 QSELMAATGASDLSVVQHKLDLRSAYSEIEGKPGSRDERGEPFVTTFHKKFRGTVDYIWH 280

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +     + ++    +          K  SDH  ++ ++
Sbjct: 281 TDDLVTVRVLDTLPTSVLQHCKGLPSKKWGSDHLALACEF 320


>gi|301088330|ref|XP_002996873.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262111466|gb|EEY69518.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 320

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 16/206 (7%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +++ ++S NI    E      W  +         LL +       D+V LQEM       
Sbjct: 6   ERLAVLSLNIFCRPEGIHSGQWFKTGDYKDLRVALLLRKMTKF--DVVILQEMFEAGPRQ 63

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K F +  + + +         +   +  I   + +  +   V +          S     
Sbjct: 64  KRFVREAYAMGFRYHCGSVWPRLLDSRLIDGGLLILSRYPIVERDQLAYSQGAGSDG-IC 122

Query: 142 NRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            +  +   ++++      + V   H ++               S+   Q Q +  ++ + 
Sbjct: 123 AKGVLYARIQLSPDLSDSLHVFTTHTQAG--------DNYKDYSIRLAQIQEMHRFVART 174

Query: 199 K--ESLVPFVIAGDFNRKINYLGNND 222
              +  VP +I GDFN    +   +D
Sbjct: 175 IRDDPGVPVLITGDFNLDARHDLVHD 200


>gi|239621676|ref|ZP_04664707.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|317482419|ref|ZP_07941436.1| endonuclease/Exonuclease/phosphatase [Bifidobacterium sp.
           12_1_47BFAA]
 gi|239515551|gb|EEQ55418.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|316916079|gb|EFV37484.1| endonuclease/Exonuclease/phosphatase [Bifidobacterium sp.
           12_1_47BFAA]
          Length = 370

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 75/277 (27%), Gaps = 60/277 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   + +  ++   +++ LQE  +     K  
Sbjct: 150 RVMTFNVY----------------KGQADPQAIVELVRDQRVEVLALQE--TTEDFVKKL 191

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 192 NEAGIEHYLPYAQVSSSDGVFGNG---------------LWSATPLADPTDDDVNSSASF 236

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V++ G++I  + +H  +                   Q  + L +    ++ +   
Sbjct: 237 MPGGTVDMGGQQIRFVSVHTTAPVPG------------YWRQWKRSLDELGLMREHTDTR 284

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       N          ID+ V+DQ
Sbjct: 285 YIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSWPTNRAAVPMFAG-IDHVVLDQ 343

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  +    E               SDH  +   
Sbjct: 344 GMKAGQCKVVKVE--------------GSDHAALLAT 366


>gi|23466288|ref|NP_696891.1| hypothetical protein BL1743 [Bifidobacterium longum NCC2705]
 gi|23327039|gb|AAN25527.1| hypothetical transmembrane protein with unknown function
           [Bifidobacterium longum NCC2705]
          Length = 370

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 75/277 (27%), Gaps = 60/277 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   + +  ++   +++ LQE  +     K  
Sbjct: 150 RVMTFNVY----------------KGQADPQAIVELVRDQRVEVLALQE--TTEDFVKKL 191

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 192 NEAGIEHYLPYAQVSSSDGVFGNG---------------LWSATPLADPTDDDVNSSASF 236

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V++ G++I  + +H  +                   Q  + L +    ++ +   
Sbjct: 237 MPGGTVDMGGQQIRFVSVHTTAPVPG------------YWRQWKRSLDELGLMREHTDTR 284

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       N          ID+ V+DQ
Sbjct: 285 YIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSWPTNRAAVPMFAG-IDHVVLDQ 343

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  +    E               SDH  +   
Sbjct: 344 GMKAGQCKVVKVE--------------GSDHAALLAT 366


>gi|117167885|gb|AAI24748.1| Si:ch211-181h6.2 protein [Danio rerio]
          Length = 569

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 61/217 (28%), Gaps = 16/217 (7%)

Query: 23  KVRLVSWNINT----LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI +                 V    + +  + +  +   ADI+ LQE+   +
Sbjct: 198 DFSVMSYNILSQDLLCDNTYLYRHCNPPVLDWRNRFPNIIKELEQYSADIMCLQEVQEDH 257

Query: 79  AVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              ++        +   +     +                V    V   ++  PL+   +
Sbjct: 258 YKQQIKPSLESLGYHCEFKRRTGLKPDGCAVIFKRERFSLVSCHPVEYFRRGVPLMDRDN 317

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  R    +   ++   I V + HL                 + L+     +    
Sbjct: 318 VGLIVLLRP---IDPHVSLSNICVANTHLLYNP------RRGDIKLAQLAMLLAEISRVS 368

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                S+ P ++ GDFN             + +D + 
Sbjct: 369 QLPDSSVCPVLLCGDFNSVPWSPLYRFIKDRRLDYDG 405


>gi|260906117|ref|ZP_05914439.1| Endonuclease/exonuclease/phosphatase [Brevibacterium linens BL2]
          Length = 313

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/317 (13%), Positives = 86/317 (27%), Gaps = 85/317 (26%)

Query: 1   MIRKYVLALVFFLVPCTA--------------SVAQKVRLVSWNINTLSEQEGVSLWKNS 46
           +IR  VL+ + FLVP                 S    + + + N+       G  L + +
Sbjct: 66  LIRFSVLSAIGFLVPTVVWASMFGSAVIPAGDSGGADLTVATHNV-------GARLPEPT 118

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                       Q   + D DIV +QE+ S +                  + ++ S   S
Sbjct: 119 AA---------AQSLVDADPDIVTIQELESLSG-------------KIIHKELDSSFEHS 156

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  +  +          +P+   ++        RA    V  +   I    +H+ S
Sbjct: 157 RVVDTIGVWSK----------WPMSEPEEVDLGLQWPRAFATTVSTDHGDIRFYSVHMPS 206

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
                      + +   L+ + +          +     ++AGDFN            + 
Sbjct: 207 VRPGHEAM--RNAAIRRLATEVET---------DEAEHVIVAGDFNTATTDTN-----FS 250

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
           T+ P     R                    +D+ +                  ++    +
Sbjct: 251 TLSPPLEDTRVEAGGGFGF-TWPARFPVTRLDHVLYRG---------------FDATSDE 294

Query: 287 SRGKRLSDHCPISIDYD 303
              +  SDH  +    D
Sbjct: 295 VLDRGSSDHRAVVAGLD 311


>gi|311063871|ref|YP_003970596.1| hypothetical protein BBPR_0452 [Bifidobacterium bifidum PRL2010]
 gi|310866190|gb|ADP35559.1| Conserved hypothetical membrane spanning protein with
           Endonuclease/Exonuclease/phosphatase family domain
           [Bifidobacterium bifidum PRL2010]
          Length = 371

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 73/278 (26%), Gaps = 58/278 (20%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   +    ++   +++ LQE  + N   K  
Sbjct: 149 RVMTFNVY----------------KGHADAKAIVDIVRDQRVEVLALQE--TTNDFVKKL 190

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N         R  +  V   +  + G            
Sbjct: 191 DEAGIHSYLPYSQVSSSDGVYGNGIWSATELGRPVDDEVGSSASFMPGGT---------- 240

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              +       ++  + +H  +                  S+  + L +  + +      
Sbjct: 241 ---VTFGGGKAQLRFVSVHTTAPIPG------------YWSRWKRSLDELASMRSHEGSR 285

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           +V  GDFN   ++    +                       N     R    ID+ V+D+
Sbjct: 286 YVFMGDFNATTDHTPFRNILGNRFSDAARQSGHGFTFTWPSNKLPLPRFAG-IDHIVLDK 344

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    +I                     SDH  +    
Sbjct: 345 D----IIAGQMQVKSV----------AGSDHAALLATI 368


>gi|255321210|ref|ZP_05362376.1| endonuclease/exonuclease/phosphatase [Acinetobacter radioresistens
           SK82]
 gi|255301764|gb|EET81015.1| endonuclease/exonuclease/phosphatase [Acinetobacter radioresistens
           SK82]
          Length = 379

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 63/250 (25%), Gaps = 45/250 (18%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
            Y LL +  +    DIV   E              TW    S        +     D   
Sbjct: 115 QYHLLIEQIQKYQPDIVLTLETD-----------ETWQNELSGIEKDYPFRVAVPLDNLY 163

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + +  +      +   +L  +        R         +G+ + +  +H K     ++
Sbjct: 164 GMHLYSRLKLEDTEVKFILSDEIPSIHTTVRL-------RSGQPVQLFCLHPKPPSPTEA 216

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            ++T   +          L     Q K+     ++ GD N            ++ I    
Sbjct: 217 KDSTLRDA---------ELLIVGDQIKDMDKSCIVMGDLNDVAWSRTTR--LFQRIS--G 263

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                   +  +D+                    +   D++      
Sbjct: 264 LLDPRVGRHFVNTFHANYPLFRWSLDHVFHS--------------TDFALVDMQRLSHVG 309

Query: 293 SDHCPISIDY 302
           SDH P+ I  
Sbjct: 310 SDHFPVYIVL 319


>gi|239979011|ref|ZP_04701535.1| hypothetical protein SalbJ_06232 [Streptomyces albus J1074]
          Length = 246

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 68/281 (24%), Gaps = 50/281 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++S+N+ +L                  D   + +  +    D+V +QE   +    K 
Sbjct: 7   VRVLSYNVRSL----------------RDDPVAVARVVRACAPDLVLVQEAPRFFRWRKP 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +               +   +        ++R     V  +  PL            R
Sbjct: 51  LGRLAAASGLVVLGGGAPAAGPALL-----CSLRAGVESVHDELLPLTPGLHR------R 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                +V     ++ VL  HL             S        Q   + + +        
Sbjct: 100 GFSTAVVRFGTVRLGVLSCHL-------------SLQKDERYAQGGMVLERLAALGVEHA 146

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V  GD N +           +  D         +   +  + +        ID     
Sbjct: 147 --VAGGDINERPKGRTFRRLAAELQDGWAVRPWGGEYTSTPADPH------QRIDAVFAT 198

Query: 264 QNAYKF--LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    +    +         +    R +DH P+    
Sbjct: 199 PGIEVLGCGVPAPGTAAPGVPPFTEDDLLRATDHLPVLAAL 239


>gi|218291327|ref|ZP_03495287.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius LAA1]
 gi|218238773|gb|EED05987.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius LAA1]
          Length = 174

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/178 (10%), Positives = 43/178 (24%), Gaps = 43/178 (24%)

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
           + +     +V+ ++  +     S                  L        +   P +  G
Sbjct: 15  ITLEFPSFYVVTVYTPNAKRDLSRLPYRLEWEDAFRAYLCAL--------DREKPVIACG 66

Query: 210 DFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN- 253
           D N                              +     +  F     +  +      N 
Sbjct: 67  DLNVAHEEIDIKNAKSNRGNSGFTDEERAKMTELLDAGFVDTFRALYPNVTDKYTWWSNM 126

Query: 254 --------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      IDYF++ +     +++    + +             SDHCP+ ++ D
Sbjct: 127 PGVRERNIGWRIDYFLVSERLRDRILEARIDDHVL-----------GSDHCPVVLEVD 173


>gi|329116405|ref|ZP_08245122.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           parauberis NCFD 2020]
 gi|326906810|gb|EGE53724.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           parauberis NCFD 2020]
          Length = 271

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 74/278 (26%), Gaps = 53/278 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGS----------------------YNAVAKVFPKNTW 89
                L ++      DI+ LQE+                        +     +   N  
Sbjct: 19  KKLVDLAEHIMAEKYDIICLQEINQLIESEVASELFNYQQVPGTPSIHKDNFALLLVNYL 78

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                                +  +A+  K    L+ S  L+   D  +    RRA+   
Sbjct: 79  RKHGHDYFWSWAYNHIGYGIYNEGVAILSKEP--LKVSDVLISKADDETDFHTRRALVGK 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            +++G+++ V+ +H+  +      E     S  L S                  P ++ G
Sbjct: 137 TKLDGREVTVVSLHMSWYGKGFEREWKTLESHLLKSV---------------DGPLMLMG 181

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           DFN   +  G        +   DS                 +  +  ++   +D+    Q
Sbjct: 182 DFNNPTDLEGYQIIASSPLGLQDSHKVAQFVFGDHSIMQDIDGWEGNQHAYKVDHIFTSQ 241

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +         F                +SDH  + I  
Sbjct: 242 D---------FEISSSEITFEGGYAPIVSDHFGLEITI 270


>gi|239930089|ref|ZP_04687042.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
 gi|291438427|ref|ZP_06577817.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
 gi|291341322|gb|EFE68278.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
          Length = 332

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/291 (10%), Positives = 67/291 (23%), Gaps = 70/291 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P    VA  +R+++ N+                         L    +    D+VF+QE 
Sbjct: 105 PTGPPVAG-LRVLTSNVEFGRGTGS-----------------LIDAVRREKPDLVFVQEC 146

Query: 75  G--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                 A+ +                    +R           +  +      +  P   
Sbjct: 147 EYTCDAALKRELADAY------------PHRRAVAGGGSEGSVLLSRFPLEAAEGVPGTM 194

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                           + +++G  + +  +           +        L +       
Sbjct: 195 GMPG-----------AVADVDGHAVRL-QLAHPMPPLPGQEDLWRRELGRLRAA------ 236

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                  +   P V+AGDFN   ++          +     L    +             
Sbjct: 237 ----AAADPDTPTVLAGDFNASQDHAAFRRILDTGLRDATRLDGADRTPTWPARTA--PA 290

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + ID+ ++ +                +  D         DH  + +D  
Sbjct: 291 FGVQIDHVLVSEEFTAR------RARFLDLADT--------DHRALVVDLT 327


>gi|221481831|gb|EEE20201.1| ap endonuclease, putative [Toxoplasma gondii GT1]
          Length = 630

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/359 (10%), Positives = 85/359 (23%), Gaps = 99/359 (27%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------- 75
            + +V+WN+N+++ +           R +  +    ++ + +D DI+ LQE+        
Sbjct: 200 PLSIVTWNVNSIAAR----------IRDSRQWFYFSRFLQKIDPDILCLQEVKLAAHGPP 249

Query: 76  ----------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                             + V+ V  +      ++     +     ++      +   +K
Sbjct: 250 GAKRGDGMPRDHGRIKDSDKVSSVEARELREALHTLLPNHSLLISLADWRYSGQMMFIRK 309

Query: 120 NVRVLQQSYPLL--GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +V+V    Y L   G          R  +        +   VL  +  +           
Sbjct: 310 DVQVCSLRYNLSLDGCPAHEHDFEGRVILA-----EFEAFCVLTTYSPNNGATPKSFERR 364

Query: 178 SPSCSLLSQQAQWLKDWITQKKES----LVPFVIAGDFNRKINY---------------- 217
                 + Q           +         P V  GD N                     
Sbjct: 365 RLWDERMLQFVTQCSSSPHCEGLPVQLLKKPLVWVGDLNCAPEDIDLSDPDQFRSVIHET 424

Query: 218 ----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA------NKN----- 250
                                 F   ++  + +  F +                      
Sbjct: 425 ADGTIDPDNIGQAGCTDAERRRFRAILERGNLVDAFRELHPRTEPPPLESAEYSWRGFGG 484

Query: 251 -------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      + +D+ V+ +     +                      SDHCP+ + +
Sbjct: 485 SGSRGLLRGLGMRLDHIVLTETLMPAVELVRIC-----GAGKSKANFFGSDHCPVLVRF 538


>gi|206558938|ref|YP_002229698.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
 gi|198034975|emb|CAR50847.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
          Length = 271

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 80/310 (25%), Gaps = 68/310 (21%)

Query: 12  FLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +P     A   ++  VSWN++      G + W             +R + ++  AD+ 
Sbjct: 6   LSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWN-----------AMRDWMQSTHADVY 54

Query: 70  FLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           FLQE  +                 + V  V+      I  + +  I              
Sbjct: 55  FLQEAMARRMPRPMLAPGFGAPMDDTVDDVWHCQATEIAQALDWQIALGPNVFKPSWRHG 114

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+   +   L   + +        R   R  +     + G + + +L  HL        
Sbjct: 115 NAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGARPVTLLCAHLALT----- 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                    +   +Q  W+  WI +      P V+AGDFN   N           +    
Sbjct: 165 --------RAARLRQMHWIAHWIVRNAGDD-PLVLAGDFNDWRNDSV-------ALFGEI 208

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                    + +D   +                             L
Sbjct: 209 GLSEVATLLGESGRTFPAFSPALALDKMFVRG------------LTPLEWRAPSGEAAWL 256

Query: 293 SDHCPISIDY 302
           SDH P     
Sbjct: 257 SDHLPYIARL 266


>gi|126736303|ref|ZP_01752045.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Roseobacter sp. CCS2]
 gi|126714124|gb|EBA10993.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Roseobacter sp. CCS2]
          Length = 266

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 42/287 (14%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+  WN+      +                    +    LDA++V L E+   + +  + 
Sbjct: 10  RVAVWNLAGFGGIDFD------------RMKRQAEGLALLDAELVTLVEVNPVSYIDALA 57

Query: 85  PK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            +  T+ + Y T  L               + V+             L      +    R
Sbjct: 58  AEIGTYGLHYDTTILPQPGGLHIGFLHKKGVEVK----------NVTLVPGSEGAYLNGR 107

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI----TQKK 199
           RAV + V++      VL +HLKS            P   L   Q   + +++        
Sbjct: 108 RAVSVDVKMGKFSAHVLGVHLKSG--------RDKPEQKLRDTQCIAIGNYLTNLRNTPG 159

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PID 258
                 ++ GDFN       +N   +  +  +D +            ++   + +   +D
Sbjct: 160 FKRKTLLLMGDFNMIPGQDVSN---FHHLGGDDLMDFVSSWDLQDRFSHILDKGRANLLD 216

Query: 259 YFVMDQNAYKFLIQESFSEIL---YNEDDIKSRGKRLSDHCPISIDY 302
            F + +      ++ S          +   +     +SDH P    +
Sbjct: 217 GFAVSRTFATDYVRGSLRLFPMHWTMDMGRERFRDEVSDHLPFVASF 263


>gi|108761532|ref|YP_629832.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108465412|gb|ABF90597.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 596

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 63/254 (24%), Gaps = 31/254 (12%)

Query: 43  WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102
             +S      D     +  +  DAD+V +QE    +  A          F +        
Sbjct: 84  NTSSGNGQDYDPGHGIRIFQGTDADVVMIQEFNYKSNSAADIRGFVDTTFGTQFHYYREG 143

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
                N       +  +   +    +      +       R      +++ G    +  +
Sbjct: 144 GAQIPNG------IISRYPIIASGEWDDPYVSN-------RDFAWARIDVPG-PKDLWAV 189

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
            +       S            + +A  L   I     +    VI GD N          
Sbjct: 190 SVHFLTTGSS----------NRNSEASNLVSRIKANIPAGDYLVIGGDLNTGSRNESAFS 239

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
              + +             D   N N N     P D+ ++D + + +          +  
Sbjct: 240 TLSQVVRTAGPHP-----ADKNGNTNTNAGRNAPYDHVLVDSDLFAYQTPVVIGGSTFTN 294

Query: 283 DDIKSRGKR--LSD 294
             +        LSD
Sbjct: 295 GLVVDTRVYSPLSD 308


>gi|88607806|ref|YP_505072.1| exodeoxyribonuclease III, N-terminal truncation [Anaplasma
           phagocytophilum HZ]
 gi|88598869|gb|ABD44339.1| exodeoxyribonuclease III, N-terminal truncated [Anaplasma
           phagocytophilum HZ]
          Length = 185

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 37/195 (18%)

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +  S+S   +R     L     KKI V+ +++ +   ++S    Y        +  + LK
Sbjct: 3   SAGSYSSEESRYIECTLECTGNKKIRVVSVYVPNGQEVESETFFYK------LKFLEHLK 56

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRF 237
           D +    ++    +  GDFN     +  +D                 ++ I  N  +  F
Sbjct: 57  DRLLNIMKTEDFLIAGGDFNVAPEEIDVHDPKALDGRLCFHILERAKFREILNNGIVDIF 116

Query: 238 PKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                           +           ID  +        ++  S    +         
Sbjct: 117 RTFVGIDRKEFSWWNYREGGWQNNRGLRIDALLSSPQIADKVLDCSILSKV-------RG 169

Query: 289 GKRLSDHCPISIDYD 303
               SDH P+  D D
Sbjct: 170 WDTPSDHAPVMGDID 184


>gi|72080908|ref|YP_287966.1| membrane nuclease, lipoprotein [Mycoplasma hyopneumoniae 7448]
 gi|71914032|gb|AAZ53943.1| membrane nuclease, lipoprotein [Mycoplasma hyopneumoniae 7448]
          Length = 377

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 85/319 (26%), Gaps = 50/319 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R+  WN+   S          S K  T+    + Q   +   D+V L E+      +
Sbjct: 65  NSIRIGFWNVLNYS--------NKSSKTNTAKTYAISQVINSTKLDLVGLAEITQTGDGS 116

Query: 82  KVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  +       +  + I  ++    N         +   + +   + P           
Sbjct: 117 DIVKELNTVNPNAAWKEITTAEEGKVNQKEKYTFLYKSSLLEIANFASPSNPYLIQKGVK 176

Query: 141 --GNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW- 194
               R    +         +    +  H  +     +         S  SQ+A+ ++D  
Sbjct: 177 LEWARPLAAVKFNTKTERKEDFTFVIGHFDAPGVQKNRGEVQDKETSQGSQEAREVRDLI 236

Query: 195 -----ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                I +K       +   D N +         F  T++   SL+   ++      +N 
Sbjct: 237 NLLVEIDKKDGENKEIIFMADTNIRAENSE--KLFKSTLNSYRSLLDKEEKTSL---SNT 291

Query: 250 NLRNKIPIDYFVMDQNA----------YKFLIQESFSEILYNEDDIKSRGKR-------- 291
             +     D      N           +    +   +   Y+E   K             
Sbjct: 292 FGKYSNSYDKIFYKGNLVANKGQKFDIFSIFKKNIANVEKYDELRKKDGRSMNYKINQLG 351

Query: 292 -------LSDHCPISIDYD 303
                  +SDH  +  D +
Sbjct: 352 EINRIKGISDHTMVYFDLE 370


>gi|327537861|gb|EGF24563.1| endonuclease/exonuclease/phosphatase [Rhodopirellula baltica WH47]
          Length = 383

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 69/253 (27%), Gaps = 49/253 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             +    Q  ++ D D+V   E+              W       + I   +     D  
Sbjct: 127 DRFEQWSQVIRDTDVDMVIAAEIDDR-----------WKPILEELKPIFPHQIIYPQDNW 175

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             +A+  +      +    +        A            +G++I V+ +H +    + 
Sbjct: 176 YGMAMLSRLPIRESEIRFRIQDDIPSIDAMVELP-------SGEEIRVIGVHPRPPEPIR 228

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
             + T   +          L  W  +  E   P VI GD N               +   
Sbjct: 229 DNDATARDA---------ELVIWGKELAEDDRPIVIGGDLNDVAWSPSTR------LFLR 273

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            S +  P+      N+       +   +D+                    +   D++  G
Sbjct: 274 LSQLLDPRRGRGFFNSFHADHIWMRFPLDHVFHS--------------THFGVRDLQRLG 319

Query: 290 KRLSDHCPISIDY 302
              SDH PI ID 
Sbjct: 320 HVGSDHFPILIDL 332


>gi|32473147|ref|NP_866141.1| hypothetical protein RB4505 [Rhodopirellula baltica SH 1]
 gi|32397826|emb|CAD73827.1| conserved hypothetical protein-putative integral membrane protein
           [Rhodopirellula baltica SH 1]
          Length = 383

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 69/253 (27%), Gaps = 49/253 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             +    Q  ++ D D+V   E+              W       + I   +     D  
Sbjct: 127 DRFEQWSQVIRDTDVDMVIAAEIDDR-----------WKPILEELKPIFPHQIIYPQDNW 175

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             +A+  +      +    +        A            +G++I V+ +H +    + 
Sbjct: 176 YGMAMLSRLPIRESEIRFRIQDDIPSIDAMVELP-------SGEEIRVIGVHPRPPEPIR 228

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
             + T   +          L  W  +  E   P VI GD N               +   
Sbjct: 229 DNDATARDA---------ELVIWGKELAEDDRPIVIGGDLNDVAWSPSTR------LFLR 273

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            S +  P+      N+       +   +D+                    +   D++  G
Sbjct: 274 LSQLLDPRRGRGFFNSFHADHIWMRFPLDHVFHS--------------THFGVRDLQRLG 319

Query: 290 KRLSDHCPISIDY 302
              SDH PI ID 
Sbjct: 320 HVGSDHFPILIDL 332


>gi|313139689|ref|ZP_07801882.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313132199|gb|EFR49816.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 371

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 73/278 (26%), Gaps = 58/278 (20%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   +    ++   +++ LQE  + N   K  
Sbjct: 149 RVMTFNVY----------------KGHADAKAIVDIVRDQRVEVLALQE--TTNDFIKKL 190

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N         R  +  V   +  + G            
Sbjct: 191 DEAGIHSYLPYSQVSSSDGVYGNGIWSATELGRPVDDEVGSSASFMPGGT---------- 240

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              +       ++  + +H  +                  S+  + L +  + +      
Sbjct: 241 ---VTFGGGKAQLRFVSVHTTAPIPG------------YWSRWKRSLDELASMRSREGSR 285

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           +V  GDFN   ++    +                       N     R    ID+ V+D+
Sbjct: 286 YVFMGDFNATTDHTPFRNILGNRFSDAARQSGHGFTFTWPSNKLPLPRFAG-IDHIVLDK 344

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    +I                     SDH  +    
Sbjct: 345 D----IIAGQMQVKSV----------AGSDHAALLATI 368


>gi|163788842|ref|ZP_02183287.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
 gi|159876079|gb|EDP70138.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
          Length = 575

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/319 (10%), Positives = 76/319 (23%), Gaps = 73/319 (22%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + S    +RL+++N       +                       +++  DI+ L E  +
Sbjct: 209 SKSNPSDIRLMTYNTLFNGFND------------VDRVDNFENIIRSIAPDIIGLNECWN 256

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
            +         T+        L   ++     +         +   +             
Sbjct: 257 TS--------ETYVKSLLDTWLPTGTQNGWYVEKIGGQITLSRWEIIQ-----------E 297

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI- 195
           +     +  V + +  +     +L  +    C           +      QA     +I 
Sbjct: 298 WQNLSRQFPVLIDL-PSSYPTDLLFTNAHLNCCG---------ADQQRQDQADEYAAFIL 347

Query: 196 -------TQKKESLVPFVIAGDFN--------RKINYLGNNDD----FWKTIDPNDSLIR 236
                          PF+ +GD N          +      D         +D +D+ ++
Sbjct: 348 DAKSPGGNITLPENTPFIYSGDLNLVGYAQQLTTLKTGDIQDTATYGVGAPLDWDDTALK 407

Query: 237 FPKEKDSRCNANKNLR------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                 +        R          +D+ +   +             +   D +     
Sbjct: 408 EENSIQTDLRMGYTWRSDGEGFPPGKLDFIIFSDHTLTAEKSFVLQTEVMPTDRLNLYNL 467

Query: 291 R------LSDHCPISIDYD 303
                   SDH P+  D+ 
Sbjct: 468 NLLDTSSASDHFPVVADFS 486


>gi|255713110|ref|XP_002552837.1| KLTH0D02574p [Lachancea thermotolerans]
 gi|238934217|emb|CAR22399.1| KLTH0D02574p [Lachancea thermotolerans]
          Length = 368

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/337 (11%), Positives = 87/337 (25%), Gaps = 56/337 (16%)

Query: 23  KVRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78
              L+++N+     +  Q    + +     +     L R+      ADI+ +QE+   + 
Sbjct: 29  TFTLMTYNMLSPYYMWPQVYTYVPEKYKDWSYRHRLLEREILNLYRADIMCVQELTCKDY 88

Query: 79  ---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAK 134
                     K  +   Y  +    + KR  +      I     K   +   S  L    
Sbjct: 89  EGFWKNHFKTKMNYGSSYIAKTPPKYWKRPEDEMDGVGIFYNLNKFEHISTSSIYLNDLI 148

Query: 135 DSFSRAGNRRA--------------------------------VELLVEINGKKIWVLDI 162
             F+ +                                        L+    + ++V+  
Sbjct: 149 GLFNISELNYLKSTIITLTNGAGEPIDKDSLLNVLHGRNQVSLFVSLLHKETRTLFVVVN 208

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
               + + +            L +  + L   +     S V  + AGD N   +      
Sbjct: 209 THLYWKYDEVKLCQCLTIMRKLHRVIKSLLMGMEGVTYSKVKILFAGDLNSAPDSPVIKF 268

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNAN------------KNLRNKIPIDYFVM-DQNAYKF 269
              +++   D  +  P                       + + K   DY    D++    
Sbjct: 269 LKGESVHRADLSLINPLRPYLNRYIYQDTSADLFEHTCYSGKLKGIFDYIWYHDKDFRLK 328

Query: 270 LIQESFSE---ILYNEDDIKSRGKRLSDHCPISIDYD 303
            I         +   ++         SDH P+  + +
Sbjct: 329 RILSGAEVSQELRELQEFGLPNKDHPSDHIPVLAELE 365


>gi|70605975|ref|YP_254845.1| exonuclease [Sulfolobus acidocaldarius DSM 639]
 gi|68566623|gb|AAY79552.1| exonuclease [Sulfolobus acidocaldarius DSM 639]
          Length = 241

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/297 (10%), Positives = 77/297 (25%), Gaps = 75/297 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
           ++++SWN+N                +       L+      D D++ LQE+ +    +  
Sbjct: 1   MKILSWNVNG--------------IKAILRKGALQPVIN--DYDVIMLQEIRTNEIPLDI 44

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               +    F S                ++ +    K   +       +   D   R   
Sbjct: 45  ALSGSNLFPFPSK------------KKGYSGVLTISKIKPLSVIKGLGINEFDEEGR--- 89

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 ++ I     ++++ +        +  +        + +    L+          
Sbjct: 90  ------VLTIELDDYFIINAYFPRAGDDLNRLDYKIKFDLEIEKFMLELRKR-------- 135

Query: 203 VPFVIAGDFNRKIN--------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            P ++ GD N   +                       K +  +          +    + 
Sbjct: 136 KPVILCGDLNVARDKIDSTFWDEKEPGLTSEERGWINKILSTDFVDTYRFINGNKIEYSW 195

Query: 249 KNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++   K     IDY ++       +      +I              SDH P+ ++ 
Sbjct: 196 RSYLEKWKAMRIDYCIVSSEIKDRIKDSKIIKIE------------GSDHYPVYLEI 240


>gi|302505072|ref|XP_003014757.1| DNA lyase Apn2 [Arthroderma benhamiae CBS 112371]
 gi|291178063|gb|EFE33854.1| DNA lyase Apn2 [Arthroderma benhamiae CBS 112371]
          Length = 601

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 75/308 (24%), Gaps = 72/308 (23%)

Query: 64  LDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN----------NDIH 111
           L+ADIV  QE  +   +    +   + W  ++S  R        S               
Sbjct: 5   LEADIVVFQEAKIQRKDLQDDMVLVSGWDCYFSLPRQKKGIYVFSKCAAIRAEEGVTGAL 64

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
              + R    ++      + G               + V+  G+ + +      +F  + 
Sbjct: 65  CPPSSRTPFRQLSASE-QIGGYPSIEQMEELSEVDPITVDSEGRCLIL---EFPAFVLIG 120

Query: 172 SLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNR---------------- 213
                                L+  +    +     ++AGD N                 
Sbjct: 121 VYCPADRDETRDDFRLGFFNLLEVRVRNLVKMGKRVILAGDLNTCAGPIDSAPALERIRK 180

Query: 214 ------KINYLGNNDDFWKTIDPNDSL-------------IRFPKEKDSRCNANKNLR-- 252
                 +         F + + P  S                  +   SR          
Sbjct: 181 GTETEEEYLSYPARRIFNRLVRPVGSTGDTHDTETLPVLRDLCREFHPSRTGMYTCWNQK 240

Query: 253 -------NKIPIDYFVMDQNAYKFLIQESFSE----------ILYNEDDIKSRGKRLSDH 295
                      IDY +   N   + ++ +  E          I  +  ++    ++ SDH
Sbjct: 241 VNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIVCVKLELIYRSFKNLLISNEQGSDH 300

Query: 296 CPISIDYD 303
           CP+     
Sbjct: 301 CPVYASIS 308


>gi|126463279|ref|YP_001044393.1| hypothetical protein Rsph17029_2519 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104943|gb|ABN77621.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 309

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 80/309 (25%), Gaps = 43/309 (13%)

Query: 34  LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCI 91
           L       L ++           +R+  + L AD++FL  +   +    A+    + +  
Sbjct: 3   LERAGPGLLLRDIRAGKDPQILAVRRMIEALRADVLFLTGVDYDADLLAARALAGDLYPH 62

Query: 92  FYSTERLIN-HSKRDSNNDIHTA----------------IAVRKKNVRVLQQSYPLL--- 131
             +        +  D + D                    + +  +      + +  L   
Sbjct: 63  LLALRPNAGRPTGIDLDGDGRLGGPGDAQGWGRFGGQGGMVLLSRLPLGPPRDFSDLLWA 122

Query: 132 -------GAKDSFSRAGNRRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSP 179
                        +RA  R A     E+      G  + +L        F    +     
Sbjct: 123 DLPEANLPPMPPEARAVQRLASVGAWEVPLPRTGGPALKLLLWSATPPVFDGPEDRNGRR 182

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +       A+ L+  +        P ++ G  N               +  + +L     
Sbjct: 183 AGDEALFWARLLEGRLPFPAPEG-PVLLMGKANIDPLAGDGPRAAIAALLAHPALQDPAP 241

Query: 240 EKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                  A  + R          DY +    A    +  S        D + +   + S 
Sbjct: 242 RGPDGSRATADFRADDGPGLLRTDYIL---PARGLPVTASGVLWPPPGDPLAAVAAQASR 298

Query: 295 HCPISIDYD 303
           H P+ ++ D
Sbjct: 299 HRPVWVELD 307


>gi|290999631|ref|XP_002682383.1| predicted protein [Naegleria gruberi]
 gi|284096010|gb|EFC49639.1| predicted protein [Naegleria gruberi]
          Length = 314

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 95/307 (30%), Gaps = 32/307 (10%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
             L L           +  +   S+N+                 +      +L +     
Sbjct: 26  LTLNLSIINKSTAKQSSTDLTYCSFNVQVFG---------QKKMQNNQVVDVLLKILSQC 76

Query: 65  DADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             D+  + E+   +      + ++  ++        +  ++     +++           
Sbjct: 77  --DLTLIMEIRDASGEAIKELLQLLNESKNSAGRKFQISLSLRLGRTSSKEQYGYIYDSD 134

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            V +          +D         +V +L   + + I + ++  K+  F+  +  +   
Sbjct: 135 KVHINST---YQYPEDFDQFERPPYSVLVLPSNSTRSISLPNVASKNALFVSGIHTSPKA 191

Query: 180 SCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           +   +       + +  +     S +P++++GDFN   +Y+  +D     +  + +    
Sbjct: 192 AVQEIDALYDVYEYYYRKNRIINSNIPWLLSGDFNAGCSYVKESDWKGIRLRTDSTFKWL 251

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDH 295
            K+        K   ++  I            +  E    + + E+   ++   + +SDH
Sbjct: 252 IKDDQGTMVKTKCPYDRFVI---------AGSIDYEKVQVVNFKEEYGLTQALAEAVSDH 302

Query: 296 CPISIDY 302
            PI +  
Sbjct: 303 FPIRMTI 309


>gi|147819341|emb|CAN77883.1| hypothetical protein VITISV_024433 [Vitis vinifera]
          Length = 839

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 80/288 (27%), Gaps = 67/288 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++++SWN+   ++               S   +++ + +N   D++ +QE    +    
Sbjct: 2   KLKILSWNVRGANDS--------------SKRKVIKTFIRNQRVDLICIQETKIQSMSEG 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +        F   + +               I +      +           D       
Sbjct: 48  IVRSLGSGRFLDWKAMNAEGASG-------GILICWDRRSL-----------DILEWEEG 89

Query: 143 RRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              +     ++    +WV       F                L ++   ++         
Sbjct: 90  HFTLSCRFWDVENGAVWVFTGVYDPFS---------KVERDELWEEFGAIRGLWE----- 135

Query: 202 LVPFVIAGDFNRKI---------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  +                 F + +D    +    +  +   N   N +
Sbjct: 136 -DPWCLGGDFNITLLQRERSSQRRISSTMRKFAEIVDDLGLVDLLLQGGEFTWNGGHNNQ 194

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +D F++  +              ++        + +SDH PI++
Sbjct: 195 AWARLDRFLVSPS----------WVDQFSGITQSRLPQPVSDHFPITL 232


>gi|238028875|ref|YP_002913106.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           glumae BGR1]
 gi|237878069|gb|ACR30402.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
           glumae BGR1]
          Length = 268

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 78/301 (25%), Gaps = 66/301 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY- 77
           +   ++  VSWN++      G + W             +R++ ++  ADI FLQE  +  
Sbjct: 14  TAPNEITAVSWNLHKGRSPLGFTAWN-----------AMRRWVESTHADIYFLQEAMARR 62

Query: 78  ---------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                          + V  V+      I  + +  I               A+   +  
Sbjct: 63  MPRPVLAAGFGAPMDDPVDDVWHCQATEIARALDWQIALGPNVFKPSWRHGNAILSPHPL 122

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSC 181
            L   + +        R   R  +     + G   I +L  HL                 
Sbjct: 123 DLGGRWDISA-----HRFERRGLLVARATLAGSAPITLLCAHLALT-------------R 164

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           +   +Q  W+  WI    +   P V+AGDFN   N                         
Sbjct: 165 AARLRQMTWIAHWIEHHAQEG-PLVLAGDFNDWRNDSVP------LFGEIGLAEVATLLG 217

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +S           + +D   +                             LSDH P    
Sbjct: 218 ESG-RTFPAFSPALALDKMFVRG------------FTPLEWRAPGEDTAWLSDHLPYIAR 264

Query: 302 Y 302
            
Sbjct: 265 L 265


>gi|307095034|gb|ADN29823.1| salivary inositol polyphosphate 5-phosphatase [Triatoma
           matogrossensis]
          Length = 316

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/341 (11%), Positives = 86/341 (25%), Gaps = 69/341 (20%)

Query: 1   MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M  K +L   F  +         S  + V  V+WN+             +          
Sbjct: 1   MNLKILLLFSFVCLVSIHAKDANSAPRTVYAVTWNV----------GEGDPPGTVKELLG 50

Query: 56  LLRQYAKNLDADIV--FLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +  Y  +++ DIV   LQE+    +  A+ +                    K +S   +
Sbjct: 51  QISSY--DVNPDIVIVGLQEVSMNPATAAIKRNTWTKKIDDVLKMTSNYEKVKSESLLGM 108

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              + V+ K  ++ QQ    +         GN+  V +   +N +   +++ HL +    
Sbjct: 109 LLKVYVKVKYGQLFQQEEATIVMTGKGGTFGNKGGVIIKFHLNNQWYCIVNSHLPAHDGK 168

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------- 223
                          ++            ++       GD N ++      D        
Sbjct: 169 LQDRIRDYKLIEAKRKEF---------CNKASDYIFWLGDLNFRLMDEKTYDVNKIIGLI 219

Query: 224 ----------------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
                                  +              +         + R     D  +
Sbjct: 220 KQNKLSDLLQKDELIKAKSNGTIFNGFTEKLIEFAPTFKLKKGQGQYNSERRPAWTDRVL 279

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +  K +    +  +    +         SDH P+   +
Sbjct: 280 CKSDTSKKITPTLYKSVTSYLE---------SDHYPVQAQF 311


>gi|163741919|ref|ZP_02149308.1| hypothetical protein RG210_05097 [Phaeobacter gallaeciensis 2.10]
 gi|161384640|gb|EDQ09020.1| hypothetical protein RG210_05097 [Phaeobacter gallaeciensis 2.10]
          Length = 333

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 78/315 (24%), Gaps = 71/315 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76
           ++   V +V+WN+      E                     + + L   +V L E+    
Sbjct: 52  ALTASVSVVAWNVERCLFPEDT-----------------ASHIQPLAPQVVLLSEVDHGM 94

Query: 77  ---------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-----IHTAIAVRKKNVR 122
                          +     + + +    L   +++    D          A+      
Sbjct: 95  ARTGQRHTTEAMAKALEMAYVFGVEFHELDLGGPTEQAFCTDDFNLFGWHGNAILSAVPP 154

Query: 123 VLQQSYPLLGAKDSF-----------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
                  L      F            R G R A+  ++      I V+  HL+S     
Sbjct: 155 ERVTLIRLDDHGHWFSSDEVPADPDQPRLGGRMAIAAVLPTEAGPICVVSTHLES----- 209

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                 +        Q   L   I       +P +I GD N   +   + D   +T+   
Sbjct: 210 ------NADADHRHAQFDRLLRAIDAFAP-DMPVLIGGDLNTGNHLPPDFDWQRETLFEL 262

Query: 232 DSLIRFPKEKDSRCNA------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                +                  +   ++ +D+    +                    +
Sbjct: 263 ARARGYDWSATPDGVTTRPSLITPHPDRQMKLDW-FCTRGMRS--------TENRLVSSV 313

Query: 286 KSRGKRLSDHCPISI 300
              G+ LSDH  +  
Sbjct: 314 DENGRPLSDHDAVWC 328


>gi|149052011|gb|EDM03828.1| rCG35247, isoform CRA_c [Rattus norvegicus]
          Length = 270

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 76/270 (28%), Gaps = 33/270 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           A  +R+ ++N+ +  + +       SV         + Q       DI  +QE+   +  
Sbjct: 19  ATALRIGAFNVQSFGDHKASDPDCGSV---------IAQILAGY--DIALVQEVRDPDLS 67

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           AV+ +  +      +    + +                RK  V V   +Y     +D   
Sbjct: 68  AVSLLMEQINSVSKHEYGFVSSKPLGRDQYKEMYLFVYRKDVVSV-VSTYQYPDPED--- 123

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A +R    +     G         L       +     +   +L       +  W    
Sbjct: 124 -AFSREPFVVKFSAPG----CAAKELVLIPLHAAPNQAVAEIDALYDVYLDVIDKW---- 174

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             +    +  GDFN    Y+  +D     +  +        +       N +       D
Sbjct: 175 --NTDDMLFLGDFNADCKYVKAHDWPSIRLRSSQVFKWLIPDSADTTVGNSDCAY----D 228

Query: 259 YFVMDQN-AYKFLIQESFSEILYNEDDIKS 287
             V+      K +  +S S   + E+    
Sbjct: 229 RIVVSGAHMRKSVKPQSASVHNFQEEFDLD 258


>gi|260223197|emb|CBA33518.1| hypothetical protein Csp_B19460 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 252

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/293 (11%), Positives = 75/293 (25%), Gaps = 57/293 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++V+WN N                          +    LDAD+  +QE         V
Sbjct: 1   MKIVTWNCNG-------------------ALRKKTEQLDTLDADVYVIQECEDPAQSTDV 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F +      +       +            + + +      Q       +  S+S A  +
Sbjct: 42  FREWAGSYLWVG--TSKNKGLGVFPKKGNTVKLTEWFGTFKQAGVINSNSSTSWSTADLK 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +  + K + +      +  F  S          +   Q +              
Sbjct: 100 LFLPFTLNEDFKFLGIWTKAEGADVF--SYIGQLWKYLQIHRAQLRQ------------E 145

Query: 204 PFVIAGDFNRKINYLGNNDDF--------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
             ++ GD N    +   +  +         + I    +  R   E   + +      ++ 
Sbjct: 146 RTILLGDLNSNSIWDKPDRWWNHSDVVEELRAIGLQSAYHRQTGEAQGQESTPTFFLHRN 205

Query: 256 -----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 IDY  +  +       +             S     SDH P+S+   
Sbjct: 206 VEKAYHIDYVFVSDDLLDQARLDV---------GDSSAWLNSSDHMPVSLTIS 249


>gi|271966389|ref|YP_003340585.1| hypothetical protein Sros_5052 [Streptosporangium roseum DSM 43021]
 gi|270509564|gb|ACZ87842.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 511

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/332 (10%), Positives = 78/332 (23%), Gaps = 83/332 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P    +  ++R +SWN+     Q                     ++  + D D+V +QE 
Sbjct: 216 PPGGPLVPELRTMSWNLWHGGSQVKGG------------REKQLKFLLDRDVDVVGMQET 263

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S +A  ++     W  + +   L                 +  +   V +   P     
Sbjct: 264 SSTSA-KELAEALGWDHYQAGADLG----------------IVSRYPIVSRGPLPSESGL 306

Query: 135 DSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDS---------LENTYSPSCSLL 184
                      +   + ++ + ++ V ++HL    +                   + S  
Sbjct: 307 ---------AGINAKIRLDDRHEVAVWNVHLGYTPYGPYDACFGKWGVERLMAREAESKR 357

Query: 185 SQQAQWLKDWITQKKES--LVPFVIAGDFNR--------------------KINYLGNND 222
           ++Q Q +   ++         P ++ GDFN                       +      
Sbjct: 358 TRQIQEIMSAMSGDLADASRTPVLLTGDFNAPSHLDWTAETRKCGYDSVSWPTSVAPEQS 417

Query: 223 DFWKTIDPNDSLIRFPKE-KDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFL 270
               +                S                        ID+     +     
Sbjct: 418 GMKDSYRVAHPDPVADPGITWSPIYTTFTGGYDHDGHKGEPEPQDRIDFVHYKGDLKVKS 477

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                        + K      SDH  +   +
Sbjct: 478 SDAVVEGTPAPIPNHKDNAWT-SDHAAVLTTF 508


>gi|154336437|ref|XP_001564454.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061489|emb|CAM38518.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 845

 Score = 60.7 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 69/260 (26%), Gaps = 43/260 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLW-------KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            R+V++NI         +          + V    +    + Q      AD+V LQE G 
Sbjct: 426 FRVVTYNILYDDFCTSKNSKAKIYPFASDEVLDLENRKVRIAQELLAYHADLVCLQECG- 484

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--- 133
                 VF      +  +      +  +  +         R+    +++ +   L     
Sbjct: 485 ----RDVFQGYFLPVMRACGYDGVYCNKSGSVKEGCGFLFRESRFHLVESASVPLNFQTL 540

Query: 134 --------KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                       +    + A+  +  I  + +       K     ++    ++ +C +  
Sbjct: 541 SSMFPDLAGRVGACPELKEALSTVTTIGARVVLRETTSDKEVVVGNTHLFYHANACHIRI 600

Query: 186 QQAQWLKDWITQ--------------------KKESLVPFVIAGDFNRKINYLGNNDDFW 225
            QA  L  W+ +                          P V+ GDFN             
Sbjct: 601 LQAYMLLHWLHEASLIPPGGDAVASPSSSFADHAPPHRPVVMCGDFNCTHPTGAYRLLTT 660

Query: 226 KTIDPNDSLIRFPKEKDSRC 245
             ++ N       K     C
Sbjct: 661 GQVEANHPSWDKGKLFWWGC 680



 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             N  L  +  IDY    +++ + L       E    E+      K  SDH  +  D  F
Sbjct: 784 WTNFTLTFREVIDYIFFSEDSLEVLRTVPIPPEAELAENFALPNKKYPSDHIALVADLAF 843


>gi|261886262|ref|ZP_06010301.1| exodeoxyribonuclease III [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 181

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 46/179 (25%), Gaps = 42/179 (23%)

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
           ++E     I + +I+  +    D          +           +I          +  
Sbjct: 20  VLEHKFDNIHLFNIYFPNGQSGDER-------LAYKMDFYDKFLSYINALVSEGKGVIFC 72

Query: 209 GDFNRKI---------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           GD N                   +L     +   +  +  +  F      + NA      
Sbjct: 73  GDVNTAHRKIDLKNPKANSKTSGFLPIERAWIDRVIDSGFIDTFRFINGDKENAYSWWSY 132

Query: 254 K---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +           IDYF +  N    L      + +             SDHCP+ I+ D
Sbjct: 133 RFNARAKNVGWRIDYFFISSNLKDKLKDAFILDSI-----------EGSDHCPVGIEID 180


>gi|147801137|emb|CAN71042.1| hypothetical protein VITISV_019062 [Vitis vinifera]
          Length = 568

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 75/291 (25%), Gaps = 65/291 (22%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              K+RL+SWN+   ++               S   +++   ++   D+  LQE      
Sbjct: 108 SPMKLRLLSWNVRGANDS--------------SKRKVIKALIRSQRVDVFCLQETKIQAM 153

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              V        F     L               I V      +      +         
Sbjct: 154 SEGVVRSLGTGRFLGWGALEASGSAG-------GILVCWDRRTLDVLDVEVGQFS----- 201

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                 +   V         +   +      D  E  +    ++                
Sbjct: 202 ------ISCRVRNVEDGFCWMFTGVYXPFSRDERECLWEELGAIRGLW------------ 243

Query: 200 ESLVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKN 250
              VP+ + GDFN  +     +           F + +D  +      +      N  + 
Sbjct: 244 --DVPWCLGGDFNITLLQGERSRQGRITGAMRRFAQMVDELELTDLPLQGGRCTWNGGRG 301

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            ++   +D F++ QN              ++        +  SDH PI ++
Sbjct: 302 SQSWARLDRFLVTQN----------WLDHFSGVVQSRLPRPTSDHFPILLE 342


>gi|294506837|ref|YP_003570895.1| hypothetical protein SRM_01022 [Salinibacter ruber M8]
 gi|294343165|emb|CBH23943.1| conserved hypothetical protein [Salinibacter ruber M8]
          Length = 445

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 47/166 (28%), Gaps = 22/166 (13%)

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV-------- 203
            NG+ + VL  H     F          +   +   + +L      + +S          
Sbjct: 281 PNGEVLHVLASHPTPPGFDGVARRNNHRNHDEVQFWSDYLNQAAYVEDDSGRGGGLHDDA 340

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--------NKI 255
           PF++ GD N   +      +  + +  ++ +      + S                    
Sbjct: 341 PFLVMGDLNADPDDASIFRNAIRHLIGHERVDGGVVPEASPARQADYPDLDPDDTSRWGA 400

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            IDY +    A   +               +     +SDH P+ +D
Sbjct: 401 RIDYVL--PAATVAVDDAGVW----RPAPARVPDVPVSDHFPVWVD 440


>gi|260427768|ref|ZP_05781747.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45]
 gi|260422260|gb|EEX15511.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45]
          Length = 297

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 76/283 (26%), Gaps = 35/283 (12%)

Query: 40  VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
                   +    D  L         AD++ LQE+    ++   F  +         R  
Sbjct: 27  DRDEPAMPEHDEPDRRLTAGLLAATGADVLALQEVFDAESLD-FFHDHYLAPVAGPYRNR 85

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA--------GNRRAVELLVE 151
                +    +  A+  R+        +  L G       A          R  +EL   
Sbjct: 86  LCLPGNDGRGLDVAVMARRDWDDATSHAALLPGDLGFAPPAGIAHDLPIFRRDCLELCF- 144

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
               ++ V  +H K+     +L      S  +   +A+ ++  +    E    +++ GD 
Sbjct: 145 ---GRLTVFVVHFKAPPPDPAL------SWKVRRLEAEAVRRLL--PSEPGALWLVIGDL 193

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N             + +  +  L    +++ +    +         D  +      +   
Sbjct: 194 NEPREEGPRAVAPLEAVGVDLGLRMPERDRWTYFEPHV--GEHHRPDALIASPALAQRYP 251

Query: 272 QESFSEILYNEDDIKSRGK------------RLSDHCPISIDY 302
                 +          G+              SDH  + +++
Sbjct: 252 DVVPRVLHRGLGHEAGPGRGARLSGVGEHRPHASDHAALVVEF 294


>gi|146399949|gb|ABQ28691.1| apn1 [Neosartorya fischeri]
          Length = 581

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/287 (10%), Positives = 60/287 (20%), Gaps = 67/287 (23%)

Query: 64  LDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           L+ADIV  QE  +   +    +     W  ++S  +                  +   N 
Sbjct: 5   LEADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPKTKKEEGLAG--------VLCPPNS 56

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--FLDSLENTYSP 179
            V  +  P       +        +E+       +   + +   +F    + S  N    
Sbjct: 57  SVSFRDLPEEQQVGGYPTIEQLSELEVDAATLDSEGRCVILEFPAFVLLGIYSPANRDES 116

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------Y 217
             +        +   I           + GD N                           
Sbjct: 117 RDNFRHSFIDLMDARIRNLVAMGKRVFVTGDLNIAKGEIDAAHATEAIRKGTVTEDEFIS 176

Query: 218 LGNNDDFWKTIDPND-------------SLIRFPKEKDSRCNANKNL---------RNKI 255
           +     F + +                            R                    
Sbjct: 177 VPARRVFNQLLSDGRVIGQRDEGREIPVLFDICRSFHPGRRGMYTCWEQRIIARPGNYGS 236

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            IDY +   +   +    +              G   SDHCP+   +
Sbjct: 237 RIDYVLCSLDMQDWFSDSNIQ-----------EGLMGSDHCPVYAVF 272


>gi|315037288|ref|YP_004030856.1| hypothetical protein LA2_00290 [Lactobacillus amylovorus GRL 1112]
 gi|312275421|gb|ADQ58061.1| hypothetical protein LA2_00290 [Lactobacillus amylovorus GRL 1112]
          Length = 367

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/325 (12%), Positives = 97/325 (29%), Gaps = 64/325 (19%)

Query: 25  RLVSWNI------------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
            ++++N+                     ++ +G      S +   +    + +  K  + 
Sbjct: 59  SIITYNVGFGAYNHNFDFFMDKGELKNGTKTQGTRGTAFSKQSVLASTDGVIKTMKKQNP 118

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D +  QE+ +++  +         +        N+    +NN     +A    +     Q
Sbjct: 119 DFMLFQEIDTHSTRSHYVN----QVNLVEHAFKNYDHVFANNFHSAYLAWPLYDPHGSVQ 174

Query: 127 SYPLLGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYS 178
           S  L  +K     A  R      A         +   V+   +K       ++S  + Y 
Sbjct: 175 SGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGGKELIVINSHMSAYD 234

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
               +   Q + L   I  + ++    ++ GDFN  +                D L  F 
Sbjct: 235 KGGKMRKAQMKILSKVIEAEYKAGNYVIVGGDFNHALGR--------------DMLTHFD 280

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN----------------- 281
            ++      +   +  +P D+ ++     + +     +++ Y                  
Sbjct: 281 HQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISKN 340

Query: 282 ---EDDIKSRGKRLSDHCPISIDYD 303
              +    +   R +DH P+ + + 
Sbjct: 341 IKAKATDINTDYRYADHNPVRLGFS 365


>gi|303272729|ref|XP_003055726.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463700|gb|EEH60978.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 566

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 86/326 (26%), Gaps = 57/326 (17%)

Query: 7   LALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           L ++  L+   A +   +   RL+++N+   +E   +                L      
Sbjct: 264 LGILDALLSGVAPLRDPLKEIRLLTYNV-WFAEHVALV----------DRMQGLSDVVSA 312

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           LD  ++ LQE+                +    +      K            V  K    
Sbjct: 313 LDPHVLCLQEV-----------TPNILMLLHAQPWFEEYKGTPPPPQQYFTLVLFKRSLD 361

Query: 124 LQQSYPLLGAKDSFSRAGNRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                  +  ++  +    R A  V  +     K+I V   HL+SF       +      
Sbjct: 362 NVDKSTKIVRREFITSKMGRYADGVAGMYVGGDKEITVFSSHLESFISKQQTSSDER--V 419

Query: 182 SLLSQQAQWL-----KDWITQKKESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPND 232
             +    + L     +    ++  +    V  GD N      G                D
Sbjct: 420 RQMKDALRALDGLTTRRGEERRNRACANAVFMGDTNWDEATDGPVPLPEGWADAWETHGD 479

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI---------QESFSEILYNED 283
               F  +       +  L+    +D  +       F +           +  +      
Sbjct: 480 GGPGFTYDLKKNAMMSGYLQK--RLDRVLY--KLADFRVAKIEMVGTTPVTRKDGSVVTH 535

Query: 284 DIKSRGKR------LSDHCPISIDYD 303
             + RG+R       SDH  + +  +
Sbjct: 536 VNEFRGRRETKPVLPSDHFGLFVALE 561


>gi|126734997|ref|ZP_01750743.1| possible endonuclease/exonuclease/phosphatase family protein
           [Roseobacter sp. CCS2]
 gi|126715552|gb|EBA12417.1| possible endonuclease/exonuclease/phosphatase family protein
           [Roseobacter sp. CCS2]
          Length = 399

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/382 (12%), Positives = 97/382 (25%), Gaps = 110/382 (28%)

Query: 24  VRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + S+N+  L  +E+E     + + +        L      ++AD+V  QE+ S  A+ 
Sbjct: 4   FTIASFNVKNLIEAEEEYYRFEEYTPEEYAWKRAWLADQLLTMNADVVCFQEIFSEAALR 63

Query: 82  KV----------------------------FPKNTWCIF-YSTERLINHSKRDSNNDIHT 112
            V                            F K  +  +  +      +S          
Sbjct: 64  DVVIETDGLGQAANEAVIPHRSKGYARKAIFRKLAYEPYTEAGLAFAPNSFDGGPGQRRP 123

Query: 113 AIAVRKKN------------VRVLQQSYPLLGAKDSFS---RAGNRRAVELLVEINGKKI 157
            IAV  +              + L   +  L   D      +  +R  +++ + +    I
Sbjct: 124 GIAVLSRFGFVGEPEIIQDLPKPLTVPFSDLDGSDGGQYQIKRLSRPILKVRIPVGDAVI 183

Query: 158 WVLDIHLKSF--------------------CFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            V + HLKS                         +       S      +A  L+  + +
Sbjct: 184 TVFNCHLKSKLGELPRPEGAAFPPAANLVNYDPATRAMGSLRSALRRMAEAWVLRKAVLE 243

Query: 198 KKESLVPFVIAGDFNRKIN-------------------------------YLGNNDDFWK 226
           + E+  P ++ GDFN   +                                   N+   +
Sbjct: 244 ELEAGNPVMVLGDFNDNEHAVSSEIISGETPFKNYAWMRRHDAQTRRDRYSDAENEIIQE 303

Query: 227 TIDPNDSLI----RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
            I              K        +        ID  +M ++       +      ++ 
Sbjct: 304 KISKVRLYSAEKLFVKKSLRDMVYTSAFGGVFESIDQILMSRHFLPEFAGKIGEMEYFSV 363

Query: 283 DDIK---------SRGKRLSDH 295
            +              K  SDH
Sbjct: 364 LNDHLTDGSHPEAPYNKLASDH 385


>gi|75906907|ref|YP_321203.1| hypothetical protein Ava_0684 [Anabaena variabilis ATCC 29413]
 gi|75700632|gb|ABA20308.1| Endonuclease/exonuclease/phosphatase [Anabaena variabilis ATCC
           29413]
          Length = 278

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 84/284 (29%), Gaps = 49/284 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +++++WNI             N  K    D+  +    +    D++FLQE+     V
Sbjct: 41  SNSIKVLNWNI----------AKNNFEKFWFQDFFKI---LRLYQPDLIFLQEVRMGVNV 87

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++         Y+   +  H +  S       I+   K V + +   P+         +
Sbjct: 88  EQIMGFTNMNWAYAPNFIDAHHQTYSGILTAAKISAIDKKVIMTKHHEPVFKTPKVSLIS 147

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                    +  N + +  ++ HL +F                   Q   L+  I+  + 
Sbjct: 148 EY------SLSHNQQTLLTINSHLINFV-----------DLDKFKAQLHELELAISTHRG 190

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P + AGDFN                      +R            K      P+DY 
Sbjct: 191 ---PIIFAGDFNTW----SRKRVVLVEKTVIRLGLREAHFAPEENKKIKRFLLSPPLDYI 243

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                + K    +   EI              SDH P+  ++ +
Sbjct: 244 FYRGLSEKPASAKVLDEIC------------SSDHKPLLAEFTY 275


>gi|291446358|ref|ZP_06585748.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291349305|gb|EFE76209.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 395

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 74/296 (25%), Gaps = 67/296 (22%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            L    +    S    + +VS N++  +     +                 +      AD
Sbjct: 166 TLFGGALTDKRSGGGDLTVVSHNVDEGNTDPAGT----------------ARVLAAAGAD 209

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ L+E+   +A             YS E    +            + +  ++     ++
Sbjct: 210 VLALEELSDASA-----------AVYSRELAAAYPHHAVIG----GVGIWSRHPLADVKA 254

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            P++           R     +    G  + V  +HL S     +   T   + +     
Sbjct: 255 VPIMP--------WTRAMRATVRAPEGPPVAVYAVHLASVRVSAAGFTTGRRNDAAREL- 305

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                     + E+    V+ GDFN        +           S              
Sbjct: 306 ------AAALRSETAPRVVVLGDFNGAY----RDRALAPVTSRLRSAQGEAGAGLGFTWP 355

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  + ID  ++       +   +   +              SDH P++    
Sbjct: 356 AAFP--VVRIDDVLVRG-----MTPRAAWTLPAT----------GSDHLPVAARLS 394


>gi|166363682|ref|YP_001655955.1| hypothetical protein MAE_09410 [Microcystis aeruginosa NIES-843]
 gi|166086055|dbj|BAG00763.1| unknown protein [Microcystis aeruginosa NIES-843]
          Length = 313

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 78/288 (27%), Gaps = 71/288 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++++N+N                    + + +    +    D+  L E     A   
Sbjct: 86  PLTVMTYNVNY----------------QLWETSAVTDLVRANPVDVFGLVEPFKEQAAEL 129

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +        +Y                    +++  +       +  L     S      
Sbjct: 130 LDNVQDLYPYY-------------YRATGGGLSLFSRYPITEATTDNLGTRHHS------ 170

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +   V + G  I V+  H  +   + +  N      +L +  AQ             
Sbjct: 171 ---LFASVNVTGHPIRVVVAHPLAPISMPNFINRNQAMVALAAYAAQQ-----------S 216

Query: 203 VPFVIAGDFNRKINYLGNNDDFWK-------TIDPNDSLIRFPKEKDSRCNANKNLR-NK 254
           +  VI GDFN     +   +                +    +  E  S  + +   +  K
Sbjct: 217 ITTVIMGDFNLTSWSIYFRNFIINSGLRSVNLGHGLNPTWFYTDEARSLSHLDHWKQALK 276

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           IPID+  + QN                 D + +    +SDH P+    
Sbjct: 277 IPIDHIFVSQNVR--------------VDQVITLPSGVSDHRPVIAKL 310


>gi|296230136|ref|XP_002760576.1| PREDICTED: protein angel homolog 2 isoform 2 [Callithrix jacchus]
 gi|296230138|ref|XP_002760577.1| PREDICTED: protein angel homolog 2 isoform 3 [Callithrix jacchus]
          Length = 418

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 40  DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 99

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +       D   
Sbjct: 100 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFYRPDISL 154

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      S C  ++          +   Q   L   I+  
Sbjct: 155 LDRDNVGLVLLLQPK-----IPCAASPSICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 209

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 210 AHQKDGSFCPIVMCGDFNSVPGSPLY 235


>gi|295425006|ref|ZP_06817715.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
 gi|295065324|gb|EFG56223.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
          Length = 367

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/325 (12%), Positives = 97/325 (29%), Gaps = 64/325 (19%)

Query: 25  RLVSWNI------------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
            ++++N+                     ++ +G      S +   +    + +  K  + 
Sbjct: 59  SIITYNVGFGAYNHNFDFFMDKGELKNGTKTQGTRGTAFSKQSVLASTDGVIKTMKKQNP 118

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D +  QE+ +++  +         +        N+    +NN     +A    +     Q
Sbjct: 119 DFMLFQEIDTHSTRSHYVN----QVNLVEHAFKNYDHVFANNFHSAYLAWPLYDPHGSVQ 174

Query: 127 SYPLLGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYS 178
           S  L  +K     A  R      A         +   V+   +K       ++S  + Y 
Sbjct: 175 SGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGGKELIVINSHMSAYD 234

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
               +   Q + L   I  + ++    ++ GDFN  +                D L  F 
Sbjct: 235 KGGKMRKAQMKILSKVIEAEYKAGNYVIVGGDFNHALGR--------------DMLTHFD 280

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN----------------- 281
            ++      +   +  +P D+ ++     + +     +++ Y                  
Sbjct: 281 HQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISKN 340

Query: 282 ---EDDIKSRGKRLSDHCPISIDYD 303
              +    +   R +DH P+ + + 
Sbjct: 341 IKAKATDINTDYRYADHNPVRLGFS 365


>gi|71275880|ref|ZP_00652163.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Dixon]
 gi|71901393|ref|ZP_00683486.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|170729372|ref|YP_001774805.1| DNA-(apurinic or apyrimidinic site) lyase [Xylella fastidiosa M12]
 gi|71163257|gb|EAO12976.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Dixon]
 gi|71728852|gb|EAO30990.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|167964165|gb|ACA11175.1| DNA-(apurinic or apyrimidinic site) lyase [Xylella fastidiosa M12]
          Length = 266

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 87/313 (27%), Gaps = 83/313 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+N N L        +                +    D D++ +QE  +     ++
Sbjct: 1   MRISSFNANGLRSALSKGFFG---------------WFSTQDIDVLCVQE--TKAQRHQL 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +   Y         +  +    ++ +A+  +      ++       D   R    
Sbjct: 44  VGPDFFPAGYHVCF-----RDATIKKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRY--- 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 VE     + V+  ++ S    +  ++             +WL+  + +   S  
Sbjct: 96  ------VEARFGNLSVVSFYIPSGSSGEKRQHYKFEV-------MRWLRPILCEWLLSGR 142

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTID-------------------------PNDSLIRFP 238
            +V+ GD+N   + L   +      +                              +   
Sbjct: 143 DYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDWLNGLCADSLHDVNSAQGRGWVDTY 202

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +    +        N+           IDY  +     + + + +               
Sbjct: 203 RVLHPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPGLRERVSRCAI-----------YCE 251

Query: 290 KRLSDHCPISIDY 302
           +R SDH P +++Y
Sbjct: 252 QRFSDHSPYTVEY 264


>gi|333022576|ref|ZP_08450640.1| putative FG-GAP repeat domain-containing protein [Streptomyces sp.
           Tu6071]
 gi|332742428|gb|EGJ72869.1| putative FG-GAP repeat domain-containing protein [Streptomyces sp.
           Tu6071]
          Length = 602

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 86/316 (27%), Gaps = 62/316 (19%)

Query: 5   YVLALVFFLVPCTASVAQK--------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
            +L L   ++  T + A          +R +S+N+             ++  R+  D   
Sbjct: 47  LLLCLSAHVLSATVAAADTVEPGSAPPLRSISYNV----------CGASAACRSELDLPS 96

Query: 57  LRQYA----KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIH 111
                    ++ +AD V LQE+      +       +   ++        +K   +    
Sbjct: 97  WTAIVAGQARDWNADSVMLQELCHGQWESLRDALPGYQGVWTKTLDAPGCAKWSGDTGFG 156

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + V+   V     +  +   +        R  +     + G+       HL  +   D
Sbjct: 157 LGLFVKSPAVDRFSANLTVPTGQ------EPRAVLCARGPVQGRTTLTCTTHLAQYITPD 210

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------ 225
           +               AQ L   I       +P  + GDFN    Y   +          
Sbjct: 211 NGS-------------AQALA-HIDSWAA-GLPVTLGGDFNAGPQYAALDPLRAGTPGTG 255

Query: 226 ----KTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
                  +  D       E  +  C + +        D+  +    ++ +  ++      
Sbjct: 256 PFAEADENDRDYFTAACLEAGATTCRSGEPTAGGQKFDHVFLSARDFRTVRADAVQPDT- 314

Query: 281 NEDDIKSRGKRLSDHC 296
                      LSDH 
Sbjct: 315 ------GGAGPLSDHL 324


>gi|238487972|ref|XP_002375224.1| sphingomyelinase family protein, putative [Aspergillus flavus
           NRRL3357]
 gi|220700103|gb|EED56442.1| sphingomyelinase family protein, putative [Aspergillus flavus
           NRRL3357]
          Length = 424

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 77/348 (22%), Gaps = 76/348 (21%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             +    ++R+ + N   L       L K   +R +     L     +   +IV LQE  
Sbjct: 8   YPSEAPSQIRIFTLNCWGL-----KYLAKYRHERLSEIGRQLA--LADPAPEIVGLQECW 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL---- 131
           +      +  +    +         + K      +   +A+  K        Y       
Sbjct: 61  TQQDYESIREQTRHLL--------PYGKFYFGGVMGAGLAILSKWPIEESSMYGYPLNGR 112

Query: 132 -GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             A         +      V        V ++           E   S  C   + QA  
Sbjct: 113 PTAFFRGDWYVGKGVACARVRFGPGASDVAEVFCTHLHAPYEKEPNDSYIC-HRTAQAWE 171

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY--------LGNNDDFWKTIDP------------ 230
           +   +    E     +  GDFN   +              D W+ I P            
Sbjct: 172 IAKLMRGAAERGHLAIGLGDFNMVPSSFAHQLIRAHSPVQDVWQAIYPDSSVAAPIDPIE 231

Query: 231 ------------NDSLIRFPKEKDSRCNANKNLRNKI-------------------PIDY 259
                       N  +     +             K                     +DY
Sbjct: 232 QKRGKPTPSAEFNLHVNGATCDGKFNTWRWTKEERKRLEKGEEIAVDKDAPCPRGKRLDY 291

Query: 260 FVMD----QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +       A+        S  +       +    LSDH  +     
Sbjct: 292 IFVGDGGYPPAFPAPQWSVESVNIGMTQRHPTLRCSLSDHFAVEATIT 339


>gi|261218771|ref|ZP_05933052.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1]
 gi|260923860|gb|EEX90428.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1]
          Length = 158

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 36/168 (21%)

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-- 215
            V+ ++L +   +D+ +  Y  S        Q L++W  ++     P V+AGD+N     
Sbjct: 2   RVVSLYLPNGNPIDTEKFPYKLS------WMQRLENWAKKRLTLEEPLVLAGDYNVIPEP 55

Query: 216 -NYLGNNDDFWKTID-----------PNDSLIRFPKEKDSRCNANKNLRNKI-------- 255
            +           +             N       +              +         
Sbjct: 56  VDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNG 115

Query: 256 -PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ID+ ++   A    I  +  + +          ++ SDH P+++  
Sbjct: 116 IRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSDHVPVTVTL 156


>gi|284031870|ref|YP_003381801.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283811163|gb|ADB33002.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 264

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/286 (10%), Positives = 68/286 (23%), Gaps = 58/286 (20%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA----------------------KVF 84
                + +     + + + AD++ LQE+      A                      +  
Sbjct: 7   NAWGGAMFDEFVPWLETVGADVLCLQEVTRTPGAAGWTRFEDGERSLPQRANLFQDVRDL 66

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP------LLGAKDSFS 138
                 +   ++         +       +A        +  ++        +   D   
Sbjct: 67  RPTDQALMVVSDTGPVTVDSGARLRQDFGVATFVGETFPVVGTHTSFVHGEYVDHVDWTI 126

Query: 139 RAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               R A+   V     G+ + V+ +H          +            QA+ L D + 
Sbjct: 127 EDRPRAALATRVVDRTEGRAVTVIQLH-------GLRDPAGKHDTPARKTQAERLADLVE 179

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                    V+ GD N          + +  +D             +    +   +    
Sbjct: 180 HAASPGDLIVVCGDLNLLPGS-----ETFAVLDKLGLTDLV---GTADTRTSIYPKPTRH 231

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             Y ++         +                   +SDH P+ +D 
Sbjct: 232 ASYLLVSDPGAVKTFEAPPHPE-------------VSDHRPLILDL 264


>gi|255024226|ref|ZP_05296212.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J1-208]
          Length = 216

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 67/259 (25%), Gaps = 67/259 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y + +DADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +++ ++  +                        + +++    +   
Sbjct: 91  -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V+ GD N                           +        +  F        +A 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAY 197

Query: 249 KNLRNK---------IPID 258
                +           ID
Sbjct: 198 SWWSYRMNARARNTGWRID 216


>gi|225548210|ref|ZP_03769495.1| hypothetical protein RUMHYD_00189 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040649|gb|EEG50895.1| hypothetical protein RUMHYD_00189 [Blautia hydrogenotrophica DSM
           10507]
          Length = 368

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 93/335 (27%), Gaps = 75/335 (22%)

Query: 20  VAQKVRLVSWNINTLSEQE------------GVSLWKNSVKRTTSDYTLLR------QYA 61
             Q   L ++NI   + +                  +    R  S    L       +  
Sbjct: 55  AGQSYTLTTYNIGFGAYEPTYSFFMDTGKMKDGDKTRGKYSRAYSRERELANTKGSIRTL 114

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPK-----NTWCIFYSTERLINHSKRDSN------NDI 110
            NLD D  F+QE       +    +     N+   + S      HS              
Sbjct: 115 MNLDCDFYFVQEADVKATRSYEVNQVQMLQNSLKDYGSIYTSAFHSAYLFYPLTEPHGKT 174

Query: 111 HTAIAVRKKNVRV--LQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSF 167
            + +    +      ++  +P+           +R      ++++  + + ++++H+ ++
Sbjct: 175 ESGLVTFSRYPVTKNIRYQFPVTKNPIVKFTDLDRCFTASYLKVDTKRDLVLVNLHMSAY 234

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL--------G 219
                          +  +Q + L +++  + E     +  GDFN  I            
Sbjct: 235 DKGGV----------IRQKQLKRLNEFLKSEAEEGNYVIAGGDFNHDIAGSKDLYESGQE 284

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSR------CNANKNLR-----NKIPIDYFVMDQNAYK 268
             +  ++ +  +D    +             C                +D F++  N   
Sbjct: 285 IPEWIYQ-LSDSDLAEGYSFVIPENLGEVASCRGADIPYQKNVTYTAVVDGFLVSDNVKA 343

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                           + S G   SDH P+ + + 
Sbjct: 344 -------------TSTVISTGFAYSDHQPVKLTFS 365


>gi|289524110|ref|ZP_06440964.1| exodeoxyribonuclease III [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502766|gb|EFD23930.1| exodeoxyribonuclease III [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 261

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/272 (10%), Positives = 70/272 (25%), Gaps = 61/272 (22%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
            S   +L ++      D++ LQE  +      A  F    + +F                
Sbjct: 15  RSRLQILERWLIKNPVDVLCLQETKVSDDQFPASAFDSWGYHVF------------FRGR 62

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
             +  +A+  +          + G  D      + R +    +     +WV++ ++    
Sbjct: 63  KAYAGVAIACQGEPNE----IIYGFPDGKDGKDDDRLMMARFD----DLWVINTYVPQGK 114

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------- 219
            +D  +  Y               D +  + ++    +  GD N                
Sbjct: 115 SIDHPDYRYKKDFFRRF------LDLLESEFKADDKIIWVGDMNVAPEEKDVTKPETKRN 168

Query: 220 ------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----------IPIDYFVMD 263
                    D + T+     +  F ++             +            +D+ +  
Sbjct: 169 HVCFHEEIRDIFDTVKSWGFVDVF-RKHHPEEGQYTFWDYRVKNALERNIGWRVDHILAT 227

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +     +           D      ++ SDH
Sbjct: 228 PSVADRSVDCYI-------DREPRSWEKPSDH 252


>gi|256088084|ref|XP_002580189.1| carbon catabolite repressor protein [Schistosoma mansoni]
 gi|238665702|emb|CAZ36428.1| carbon catabolite repressor protein, putative [Schistosoma mansoni]
          Length = 658

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/401 (12%), Positives = 106/401 (26%), Gaps = 98/401 (24%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ------------KVRLVSWNIN--TLSEQEGVSLWKNS 46
           MIR Y+     + V  +    Q               L+ +N+     +         + 
Sbjct: 180 MIRYYMDYFYLYNVHSSPPPRQWRRLAEPSKDGFAFTLMCYNLLSPNYATPFMYPYCPSW 239

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK--- 103
                     +    +   A+I+ LQE+ + +      P+     + +     +  +   
Sbjct: 240 ALNWDYRRRAILDEIRIYHANIICLQELRTDHFEEVFKPELQKLNYDAVFLPKSRRRTME 299

Query: 104 -RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN------------RRAVELLV 150
            ++S      AI  +      L + +       +                    AV ++ 
Sbjct: 300 LKESKKVDGCAIFWQTNKFEKLHEFHHEFMLSCTSMCENPTPIMLNRVMARDNVAVGVIF 359

Query: 151 EI-------NGKKIWVLDIHLKSFC------------FLDSLENTYSPSCSLLSQQAQWL 191
           E         G++  V   H+                +   L              A+ L
Sbjct: 360 ETKSSSDGTGGRQFCVTTGHIHWDPEHSDVKVIQTILWTAELWAYIDQFLKTSRSAAKQL 419

Query: 192 KDWITQKKE--------------SLVPFVIAGDFNRKINY-----------LGNNDDF-- 224
              +++                 + +P ++ GD N                   + DF  
Sbjct: 420 SPTLSRSVPLSSKIPVPGPFSPAANMPVILCGDLNSLPESGVVEFLTNGSLSLTHSDFLN 479

Query: 225 ---------WKTIDPND----------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
                    WK ++             +  R  +E +  C  N     K  IDY +  + 
Sbjct: 480 YGHKYMFKDWKLLEKWATNGNTLRHRFTFNRAYRESEGMCLTNFTYDFKGMIDYVLYTRQ 539

Query: 266 AYKFLIQ-ESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
            ++ L   +   E  + E  I         SDH  + ++ +
Sbjct: 540 HFRLLGSLDQIYEPWFQEKKILGCPHVHIPSDHFALLVELE 580


>gi|148272370|ref|YP_001221931.1| putative membrane protein with hydrolase activity [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147830300|emb|CAN01234.1| putative membrane protein with hydrolase activity [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 345

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 70/300 (23%), Gaps = 66/300 (22%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
                +    V +++WN    +                     +   A    AD++ L E
Sbjct: 99  TAFQEAQDDDVTVLTWNTLGGATG----------------ARAVADLAIESGADVITLPE 142

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                                         RD+   +    A           +  +  A
Sbjct: 143 TREETGAEIAVLM-----------------RDAGRPMWVRTAAFDDVAAARSTTILISAA 185

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWV---LDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              +    +R    +L  +  + +     + + +     +    + +             
Sbjct: 186 YGDYRMDESRGTTSVLPTVIMEPVDGNGPVIMAVHPVSPIPEQMDNWRADL--------- 236

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244
              W+ Q+ +     +IAGDFN  +++           D    +       R        
Sbjct: 237 --AWLGQRCDEGN-VIIAGDFNATLDHMSRYGGAPTERDQVTDLGKCVDAGRASGNGAVG 293

Query: 245 CNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       PID+ +             F         ++ R    SDH P+     
Sbjct: 294 TWPTGLPALLGTPIDHIMATPGWAV----TGFRV-------VEDRDGAGSDHRPVIAQLT 342


>gi|325955766|ref|YP_004286376.1| hypothetical protein LAC30SC_00225 [Lactobacillus acidophilus 30SC]
 gi|325332331|gb|ADZ06239.1| hypothetical protein LAC30SC_00225 [Lactobacillus acidophilus 30SC]
          Length = 367

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/325 (12%), Positives = 97/325 (29%), Gaps = 64/325 (19%)

Query: 25  RLVSWNI------------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
            ++++N+                     ++ +G      S +   +    + +  K  + 
Sbjct: 59  SIITYNVGFGAYDHNFDFFMDKGELKNGTKTQGTRGTAFSKQSVLASTDGVIKTMKKQNP 118

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D +  QE+ +++  +         +        N+    +NN     +A    +     Q
Sbjct: 119 DFMLFQEIDTHSTRSHYVN----QVNLVEHAFKNYDHVFANNFHSAYLAWPLYDPHGSVQ 174

Query: 127 SYPLLGAKDSFSRAGNR-----RAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYS 178
           S  L  +K     A  R      A         +   V+   +K       ++S  + Y 
Sbjct: 175 SGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGGKELIVINSHMSAYD 234

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
               +   Q + L   I  + ++    ++ GDFN  +                D L  F 
Sbjct: 235 KGGKMRKAQMKILSKVIEAEYKAGNYVIVGGDFNHALGR--------------DMLTHFD 280

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN----------------- 281
            ++      +   +  +P D+ ++     + +     +++ Y                  
Sbjct: 281 HQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISKN 340

Query: 282 ---EDDIKSRGKRLSDHCPISIDYD 303
              +    +   R +DH P+ + + 
Sbjct: 341 IKAKATDINTDYRYADHNPVRLGFS 365


>gi|315499225|ref|YP_004088029.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
 gi|315417237|gb|ADU13878.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
          Length = 303

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 74/281 (26%), Gaps = 73/281 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++S+N   L               ++SD +    +    D DI+ +QE  +   +  + 
Sbjct: 93  KVISYN--WLF--------------SSSDRSAFYAWLAVEDPDILSIQEF-NKKDLGPLL 135

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                  F S                   + +  +             ++D   + G+RR
Sbjct: 136 ASQPRAYFVSE--------------TRDDVVILSRFPL----------SEDKLDKVGSRR 171

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            V     +    + V            +         +  +     L + I     S  P
Sbjct: 172 LVSATANLPSGAVRVF--------GAHAPTLRDIDLLTQRNSYLARLPELI---ARSDKP 220

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPIDYFVM 262
            ++ GDFN               +     L   P+            +     PID+ + 
Sbjct: 221 QLVMGDFNATPWEP-----LVARLKSKAGLHEAPRLVPLSTRMAVRRQLDVGSPIDHIMA 275

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +                  ++     SDH P+  ++ 
Sbjct: 276 SHTVHLR--------------HCRTGPVMASDHRPLICEFS 302


>gi|39971027|ref|XP_366904.1| hypothetical protein MGG_02980 [Magnaporthe oryzae 70-15]
 gi|149210567|ref|XP_001522658.1| hypothetical protein MGCH7_ch7g758 [Magnaporthe oryzae 70-15]
 gi|86196713|gb|EAQ71351.1| hypothetical protein MGCH7_ch7g758 [Magnaporthe oryzae 70-15]
 gi|145017186|gb|EDK01549.1| hypothetical protein MGG_02980 [Magnaporthe oryzae 70-15]
          Length = 626

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/298 (10%), Positives = 63/298 (21%), Gaps = 69/298 (23%)

Query: 64  LDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKN 120
           L+ADIV +QE  +   +    +     W +++S  +    +S             +R + 
Sbjct: 5   LEADIVVIQEAKIQRKDLQDDMVLVPGWDVYFSLPKFKKGYSGVAIYTRSSKCSPIRAEE 64

Query: 121 VRVLQQSYPLLGA------KDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171
                   P           D       R      +        +   + +   +F  + 
Sbjct: 65  GITGILCPPNSTTKFRELSPDQQIGGYPRPDQLSDIIDEATLDSEGRCMILEFPAFVLIG 124

Query: 172 SLENTYSPSCSLLSQQA--QWLKDWITQKKESLVPFVIAGDFN----------------- 212
                         +QA  + +   +          V+ GD N                 
Sbjct: 125 VYSPATRDETRTDFRQAFHKAMDARVRNLVAMGKQVVLTGDLNIIRNELDTAGILERLRK 184

Query: 213 -----RKINYLGNNDDFWKTIDPNDS-------------LIRFPKEKDSRCNANKNL--- 251
                 +     +       +                       +    R          
Sbjct: 185 EEMTIDEFFSTPSRRFLNHMVFGGTVVGGRDEGREEPVMYDLGREFHPDRIGMYTCWETR 244

Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      IDY +       + I  +              G   SDHCP+     
Sbjct: 245 KNARPGNFGSRIDYVLCSAGMKDWFIDANIQ-----------EGLLGSDHCPVYATLS 291


>gi|182436079|ref|YP_001823798.1| hypothetical protein SGR_2286 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178464595|dbj|BAG19115.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 399

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 79/286 (27%), Gaps = 42/286 (14%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A  A  +++VSWN                     SD      Y ++  AD+  LQE  +
Sbjct: 131 PAVPAGALKVVSWNTFF--------------WDQDSDTDAFYAYLRSRSADVYLLQEYQN 176

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGA 133
                    +       +  R        +            +      ++     L   
Sbjct: 177 ARG-----DEPAPIDDLARIRKEFPGFHIATEGE---FLTLSRFPITSARALRPDGLAPP 228

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD------SLENTYSPSCSLLSQQ 187
             S++   N R +   ++++G+ + + + HL     +D      +   +         + 
Sbjct: 229 DTSWADYWNVRVLRTDIDVDGRTLSLYNTHLPDLLNVDRNPLTPAYHRSVRQLSERRDRH 288

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + L++ +     +  P V+AGD N             +  D                  
Sbjct: 289 FEALREDLD---GNGHPVVLAGDLNVLPGTGD-----LRWFDGLRDAADAGDSVYPATFP 340

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                    +D+  +       L ++S  +        +    RLS
Sbjct: 341 VSGPALW-RLDWAFVSPRI--DLHRQSVQDPPAALSTHRLIDLRLS 383


>gi|168204400|ref|ZP_02630405.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|170663976|gb|EDT16659.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens E str. JGS1987]
          Length = 263

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 75/267 (28%), Gaps = 40/267 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKNTWCIFY---------STERLI 99
                L +       D++ LQE       +       ++ + +               L+
Sbjct: 18  YKIKYLAKIIVEEKYDVIALQEASQSIKASIKEGNLKEDNYGLILIEEIKKLGGEEYHLV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     + +  K+  V  +S+  +    S +   +R+ V+  ++IN + I  
Sbjct: 78  WDYSHIGYDIYEEGLCILTKHKIVNSESF-YISKSHSKTFWRSRKIVKATIDINNENIDF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              H+  +   D                   +++ +   KES       GDFN       
Sbjct: 137 YSCHMGWWHDKDESFTF-------------QVENLLAHAKESKNRAFFMGDFNNNAFLKN 183

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKI--PIDYFVMDQNAYKFLIQES 274
              DF K+    D+      +        N      N     ID    ++N         
Sbjct: 184 EGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRNT-------- 235

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISID 301
                          + +SDH  + I+
Sbjct: 236 -KVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|297807175|ref|XP_002871471.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297317308|gb|EFH47730.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 753

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 71/255 (27%), Gaps = 20/255 (7%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIV 69
              +  ++K  ++S+NI  + L+     SL+ +  +         + L        ADI+
Sbjct: 173 TPPSPGSEKFVVLSYNILADYLANDHWRSLYFHIPRNMLSWGWRKSKLVFELGLWSADIM 232

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            LQE+  +  + +      +   +                   AI  R    +++ +   
Sbjct: 233 CLQEVDKFQDLEEEMKHRGYSAIWKMRTGNAVDG--------CAIFWRSNRFKLVHEESI 284

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--- 186
                           +E L+  + K+         +      + N +            
Sbjct: 285 QFNQLGLRDNVAQICVLETLLTSHTKENETPPPESSAGSHQVVICNIHVLFNPKRGDFKL 344

Query: 187 -QAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-FPKEKD 242
            Q + L D      +     P V+ GDFN        N    + +D +         +  
Sbjct: 345 GQVRTLLDKAHAVSKLWDDAPIVLCGDFNCTPKSHLYNFISDRKLDLSGLARDKVSGQVS 404

Query: 243 SRCNANKNLRNKIPI 257
           +     +        
Sbjct: 405 AEFRPPRPENYTTRF 419



 Score = 35.7 bits (80), Expect = 8.4,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 16/67 (23%)

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             E       + +      +DY    +      +     +            K  SDH  
Sbjct: 678 RDENGEPVVTSYHRCFMGTVDYIWRSEGLQTVRVLAPIPKQAMQWTPGFPTPKWGSDHIA 737

Query: 298 ISIDYDF 304
           +  +  F
Sbjct: 738 LVSELAF 744


>gi|254524300|ref|ZP_05136355.1| phytase [Stenotrophomonas sp. SKA14]
 gi|219721891|gb|EED40416.1| phytase [Stenotrophomonas sp. SKA14]
          Length = 402

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/403 (10%), Positives = 94/403 (23%), Gaps = 111/403 (27%)

Query: 3   RKYVLALVFFLVPCTASVAQK----------VRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
           +  +LAL         + A            +RL ++N +  S+  G  + +       +
Sbjct: 4   KPLILALALLCGATAPAFATSPAMTEKPSAALRLATYNTSLYSDDAGGLIKELEGDSEHA 63

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--- 109
               +    + +  D+V L E   ++   +             +         +      
Sbjct: 64  R--KIAAVLQQVRPDLVLLNEF-DFDDAHRAADLFQKRYLEVAQPGGGKPLHFAYRYLAP 120

Query: 110 -----------------------------------IHTAIAVRKKNVRVLQQSYPLLGAK 134
                                                  + V  +      +       K
Sbjct: 121 VNTGVPSGLDLDNNGVVGGEGRSRGNDAWGYGLHPGQYGMLVLSRYPIDEAKVRSFQLLK 180

Query: 135 DSFSRAGNRRA------------------------VELLVEINGKKIWVLDIHLKSFCFL 170
            S      R                           ++ V+     +  L  H     F 
Sbjct: 181 WSAMPGAIRPVDPRTGKSFYNDHVWSQLRLSSKSHWDVPVKTPAGVVHALVSHPTPPVFD 240

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK----------KESLVPFVIAGDFNRKINYLGN 220
              +   + +   L    ++L                       FVI GD N        
Sbjct: 241 GPEKRNAARNHDELRLWQEYLSKGDKPWLCDDKGQCGGLAQDARFVILGDLNNDPVDGDG 300

Query: 221 NDDFWKTIDPNDSLIRFP-------------------KEKDSRCNANKNLRNKI---PID 258
             +    +  N  ++R+P                   + + +  +A  +   K     +D
Sbjct: 301 RHEAIVELIENARVLRYPTPRSVGGEQTSLAYAAKGIERRGAPFHATGDFGPKSGTMRLD 360

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           Y +      +++    F     + +   + G   SDH  + +D
Sbjct: 361 YVLPSTGF-EYIGSGIFWPANESPEAKIADG---SDHHLVWVD 399


>gi|298682280|gb|ADI95343.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida]
          Length = 170

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 52/208 (25%), Gaps = 40/208 (19%)

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
                + +           A+  K       +  +    +       R  +   +E+ G 
Sbjct: 2   WPQFAYGRNAVYPHGDHGNALLSKFPISRFNNLDVSVQGN-----EQRGLLHCQLEVPGH 56

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
              V  + +                 +   +Q + + D +        P +IAGDFN   
Sbjct: 57  D-EVHAVCVHLGLR-----------EAHRQRQVKLMLDLLAS-LPPNAPVIIAGDFND-- 101

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                    W+            +   +   +       + +D   +           S 
Sbjct: 102 ---------WRLKADAVLSEHLTEAFGTPARSFPARLPLLRLDRIYLRNAMPGAAQVLS- 151

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     K     LSDH P++ + +
Sbjct: 152 ----------KYPWSHLSDHVPLAAEIN 169


>gi|296454683|ref|YP_003661826.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184114|gb|ADH00996.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 370

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 74/277 (26%), Gaps = 60/277 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   + +  ++   +++ LQE  +     K  
Sbjct: 150 RVMTFNVY----------------KGQADPQAIVELVRDQRVEVLALQE--TTEDFVKKL 191

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 192 NEAGIEHYLPYAQVSSSDGVFGNG---------------LWSATPLADPADDDVNSSASF 236

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V++ G++I  + +H  +                   Q  + L +    +  +   
Sbjct: 237 MPGGTVDMGGQQIRFVSVHTTAPVPG------------YWRQWKRSLDELGPMRGHTDTR 284

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       N          ID+ V+DQ
Sbjct: 285 YIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSWPTNRVYMPMFAG-IDHVVLDQ 343

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  +    E               SDH  +   
Sbjct: 344 GMKAGQCKVVKVE--------------GSDHAALLAT 366


>gi|254480722|ref|ZP_05093969.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2148]
 gi|214039305|gb|EEB79965.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2148]
          Length = 260

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/271 (11%), Positives = 73/271 (26%), Gaps = 63/271 (23%)

Query: 59  QYAKNLDADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
            +    +AD++ +QE  +        VF    +  +++      +S     +       V
Sbjct: 22  DWLPKQNADVICIQETKAQLDQLGDPVFQPEGYHRYFNDAVKKGYSGTAIYSK------V 75

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           + + V       P                    V+ +   I V+ +++ S    + +   
Sbjct: 76  KPRKVITSLGWDPADSEGRY-------------VQADYDGISVISLYMPSGSSSEEV--- 119

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------- 223
                    +      + +   +     F+I  D+N     +   +              
Sbjct: 120 ----LQKKYRFMDLFMEHLKGLRRKRREFIICADWNICHKEIDLRNWRSNRKNSGFLPEE 175

Query: 224 --FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272
             +   +      I   +  +   +      N+           +DY V+       ++ 
Sbjct: 176 RAWLDQLYDEVGYIDSFRLVNEEPDQYTWWSNRGQAWAKNVGWRLDYQVITPRLADKVLA 235

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                            +R SDH P  +DYD
Sbjct: 236 ADI-----------YTDERFSDHAPQIMDYD 255


>gi|332559328|ref|ZP_08413650.1| hypothetical protein RSWS8N_09735 [Rhodobacter sphaeroides WS8N]
 gi|332277040|gb|EGJ22355.1| hypothetical protein RSWS8N_09735 [Rhodobacter sphaeroides WS8N]
          Length = 309

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 75/309 (24%), Gaps = 43/309 (13%)

Query: 34  LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCI 91
           L       L ++           +R+  + L AD++FL  +   +    A+    + +  
Sbjct: 3   LERAGPGLLLRDIRAGKDPQILAVRRMIEALRADVLFLTGVDYDADLLAARALAGDLYPH 62

Query: 92  FYSTERLINHS-----------------KRDSNNDIHTAIAVRKKNVRVLQQSYPLL--- 131
             +                         +         A+ +  +      + +  L   
Sbjct: 63  LLALRPNAGRPTGIDLDGDGRLGGPGDAQGWGRFGGQGAMVLLSRLPLGPPRDFSDLLWA 122

Query: 132 -------GAKDSFSRAGNRRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSP 179
                        +RA  R A     E+      G  + +L        F    +     
Sbjct: 123 DLPEANLPPMPPEARAVQRLASVGAWEVPLPRTEGPALKLLLWSATPPVFDGPEDRNGRR 182

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +       A+ L   +          ++ G  N               +  + +L     
Sbjct: 183 AGDEALFWARLLDGRLPFPAPEGS-VLLMGKANIDPLAGDGPRAAIAALLAHPALQDPAP 241

Query: 240 EKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                  A  + R          DY +    A    +  S        D +     + S 
Sbjct: 242 RGPDGSRATADFRADGGPGLLRTDYIL---PARSLHVTASGVLWPPPGDPLAVVAAQASR 298

Query: 295 HCPISIDYD 303
           H P+ ++ D
Sbjct: 299 HRPVWVELD 307


>gi|325969943|ref|YP_004246134.1| endonuclease/exonuclease/phosphatase [Spirochaeta sp. Buddy]
 gi|324025181|gb|ADY11940.1| Endonuclease/exonuclease/phosphatase [Spirochaeta sp. Buddy]
          Length = 246

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 78/284 (27%), Gaps = 44/284 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++ L++ N+                +      T +  + +   ADI   QE+       
Sbjct: 2   QRISLITLNLWN-------------TEYWEQRRTCVVSFVQTFHADIYCFQEVREQTLCV 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                + +      E                +I V+K    VL       G  D      
Sbjct: 49  LDSALSEYQRIEGPEE---------GWRCENSIYVKKSLFTVL-----DYGRVDLQMPEI 94

Query: 142 NRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           +R      +   + + ++V  +HL      D L            + A+ L   I     
Sbjct: 95  HRGVFWARLRTTDNRPLFVATMHLTHQLNADELRTGIGYRHGEAHRAAKALNSLI----- 149

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-KIPIDY 259
                +I GDFN  ++                + +         C    N       ID 
Sbjct: 150 GDDDAIICGDFNDPVHPARIFSQ-EAGFTEVFTALGLCAPVTFPCPYLSNEGFLVEAIDK 208

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++  N    L       I+         G  LSDH P++   D
Sbjct: 209 IMLRGNIKPVLATSPQYTIV---------GGVLSDHWPVAAVLD 243


>gi|307109978|gb|EFN58215.1| hypothetical protein CHLNCDRAFT_142087 [Chlorella variabilis]
          Length = 483

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/279 (10%), Positives = 76/279 (27%), Gaps = 53/279 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           ++L+ WNIN+L+     ++ K+              + +    DI  LQE  +       
Sbjct: 1   MKLLCWNINSLAPTVRNAVLKHGSWLG---------FFQEHGLDIACLQESKVPEDKLTK 51

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++   + +  F++  R       D       A   R+K       +Y             
Sbjct: 52  ELCCVDGYQSFWAHSRQGRGHAPDIPPGPAAAQRCREKKGYSGVTTYASDAYAP------ 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 L++  +     ++++++ +     + +    P      +    L+    +   +
Sbjct: 106 ------LVLITDHGAFVLVNVYVPN-----AGDRPDRPRLHYKLRFLAALRRKCEELAVA 154

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL----------------IRFPKEKDSRC 245
               ++ GDFN        + D       ++                    + +      
Sbjct: 155 GRELLLVGDFNVPAEARDVHPDLLPGGSLDELYGQEERAALHALTAAYPDVWRRLHPQEA 214

Query: 246 NANKNL---------RNKIPIDYFVMDQNAYKFLIQESF 275
                             + IDY +        ++    
Sbjct: 215 ATYSVWNEKTSARAFNRGLRIDYVLCTPGLLGRVVSCEI 253


>gi|300114617|ref|YP_003761192.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
 gi|299540554|gb|ADJ28871.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
          Length = 248

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 70/286 (24%), Gaps = 54/286 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + ++N+                +R       LRQ+      DI+ +QE+   +    +  
Sbjct: 9   VCTYNLW-------------QDERWPERQEPLRQFITLHRPDILCVQELCPQS--QSLLD 53

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           +         +      +  +     +   + +             GA++       RR 
Sbjct: 54  QTLPTHQRVDDPFEGWKRESNIYWNESLFYLLE------------YGAENIGILEQWRRL 101

Query: 146 VELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             + ++     G  + V   H           +      ++   QA      + +     
Sbjct: 102 FWVRLQPQITGGPPLLVATAHYTWPGNHQERNDR----VNVRVAQALNTVKMLRRLATQS 157

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-NLRN---KIPID 258
            P +  GD N        +    K +        F                       +D
Sbjct: 158 SPLLFMGDLND-------HYLPLKVLQEGGLTDCFTALGRIPQITRPAYPTYVHTPQVVD 210

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           + +                +  +  D        SDH P+   Y +
Sbjct: 211 WVLH---------WGPLQPMTSDVVDFFVGDVAPSDHKPLLATYRW 247


>gi|190348504|gb|EDK40965.2| hypothetical protein PGUG_05063 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 468

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 90/343 (26%), Gaps = 77/343 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMGS 76
           + +  +RL+++N   L       + K    R  +    L         D DIV LQE+  
Sbjct: 21  TNSANIRLLTYNTWGL-----KYVSKYRRFRLCAIADRLANAVPGSQDDYDIVALQEVWC 75

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLG 132
                       W    S    +   +R+ N+ I T     I  +          +P+ G
Sbjct: 76  SED---------WEYLSSRCENLYPYRRNFNSGIITGPGLCILSKVPIKETFLYRFPING 126

Query: 133 AKDSFSRAGNRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              +F R        + + +     K  +    L S           +      + QA  
Sbjct: 127 RPSAFFRGDWMVGKSISVTLLQPHTKGALPIALLNSHMHAPYALTGDAAYSCHRACQAWD 186

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTI--------DPNDSL 234
               +   K +    V  GD N +   L           +D W  +        +     
Sbjct: 187 FTKLVRMLKRAGYAVVQVGDLNSRPGSLPYKLFTVEGGLEDSWDVLGSVSGKKAEDVAPP 246

Query: 235 IRFPKEKDSRCNA------------------------------NKNLRNKI-----PIDY 259
           +       +                                  N    N+       +DY
Sbjct: 247 VDVNVGPMASATPAIGPAGITPIAEMSPEDQILIGGVTCNSTLNTWRANRRLSEACRLDY 306

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++D+     +       + + E         LSDH   S++ 
Sbjct: 307 ALIDKATVLPINAA----VRFTEVSESPYNCSLSDHFAYSVEL 345


>gi|315223415|ref|ZP_07865272.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea
           F0287]
 gi|314946588|gb|EFS98579.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea
           F0287]
          Length = 266

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 83/290 (28%), Gaps = 51/290 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           ++ +WN+                K T      + +  K ++ADI+ L E  +  ++ +++
Sbjct: 16  KIATWNVE------------RPKKGTEKTSLAITK-IKEVNADILVLTENATSISLTELY 62

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
             +   + Y                       R      +         +   +    R 
Sbjct: 63  SFSVHSLAYE----------------------RTPEEHWVSIFSKWQITQQIKTFDNYRT 100

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD----WITQKKE 200
           A   +++     I V    +       S     +          + L      W    +E
Sbjct: 101 A-CAVIKAPFGDIAVFGTIIPYHQAGVSGVRYGNLGYKQWEYHEKDLHQQAKNWEDIIEE 159

Query: 201 SLVPFVIAGDFNRK------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-NLRN 253
           + +P  + GDFN+                    ++  D       +     + +    + 
Sbjct: 160 TQIPLWVMGDFNQSRYNLQGYGTEKVRQILTNYLEKLDLSCVTEGDLSPFLHPDPIKHKI 219

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  ID+  +  N  K + Q          D     GK +SDH  + I +D
Sbjct: 220 RNNIDHICIANNFIKQMKQYQVGAW----DHFSEEGKYMSDHNGVFISFD 265


>gi|307752095|gb|ADN93066.1| putative DNA lyase [Arthroderma benhamiae]
          Length = 588

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 74/308 (24%), Gaps = 72/308 (23%)

Query: 64  LDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN----------NDIH 111
           L+ADIV  QE  +   +    +   + W  ++S  R        S               
Sbjct: 5   LEADIVVFQEAKIQRKDLQDDMVLVSGWDCYFSLPRQKKGIYVFSKCAAIRAEEGVTGAL 64

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
              + R    ++      + G               + V+  G+ + +      +F  + 
Sbjct: 65  CPPSSRTPFRQLSASE-QIGGYPSIEQMEELSEVDPITVDSEGRCLIL---EFPAFVLIG 120

Query: 172 SLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNR---------------- 213
                                L+  +    +     ++AGD N                 
Sbjct: 121 VYCPADRDETRDDFRLGFFNLLEVRVRNLVKMGKRVILAGDLNTCAGPIDSAPALERIRK 180

Query: 214 ------KINYLGNNDDFWKTIDPNDSL-------------IRFPKEKDSRCNANKNLR-- 252
                 +         F + + P  S                  +   SR          
Sbjct: 181 GTETEEEYLSYPARRIFNRLVRPVGSTGDTHDTETPPVLRDLCREFHPSRTGMYTCWNQK 240

Query: 253 -------NKIPIDYFVMDQNAYKFLIQESFSE----------ILYNEDDIKSRGKRLSDH 295
                      IDY +   N   + ++ +  E             +  ++    ++ SDH
Sbjct: 241 VNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIVCVKLELTYRSFKNLLISNEQGSDH 300

Query: 296 CPISIDYD 303
           CP+     
Sbjct: 301 CPVYASIS 308


>gi|145341355|ref|XP_001415778.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576001|gb|ABO94070.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 335

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 86/270 (31%), Gaps = 25/270 (9%)

Query: 23  KVRLVSWNI------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            VR++++N+         +++   +    +V+        +     +   D++ +QE   
Sbjct: 3   SVRVMTFNVLCPEYKRAGTKENDDARESANVEDALRRNEKILDLIFDASPDVLCVQEFWH 62

Query: 77  -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              A+ +++ +      Y        S R            R +      +        D
Sbjct: 63  ANEAMRELWTRRLREASYDAAVTPRTSGRCDGLLTAVK---RDRLEVKDARDVLFNDCGD 119

Query: 136 SFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                  R A    V  + NG++  V++ HL      +S          +L    + L  
Sbjct: 120 -------RVAHVARVASKANGRETLVVNTHLLFPHNENSSLIRLREVFKILEF-LREL-Q 170

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--NL 251
                    +P VI GDFN   +              N   +   +E  +    +   + 
Sbjct: 171 REPAIGGKKLPIVITGDFNGS-SSGRVYRFLTSQGFTNALDVCQGREGCATSWVSHLNHH 229

Query: 252 RNKIPIDY-FVMDQNAYKFLIQESFSEILY 280
              + +D+ F+++ +     I  S+ E ++
Sbjct: 230 GECVGVDHMFLLNPSKQVLEIGASWKEAVF 259


>gi|310793816|gb|EFQ29277.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 499

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/349 (10%), Positives = 73/349 (20%), Gaps = 69/349 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   + L++ N   L       + K   +R       +          +V LQE    
Sbjct: 4   PPLPADLHLLTLNCWGL-----KYISKLRPERLAEIGRRIAS--SPDPPHVVALQECWVT 56

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKN---VRVLQQSYPL 130
                +  +    + Y                    +     +R           +    
Sbjct: 57  ADYEAIRAETRRVLPYGKFYYSGPFGGGLAILSRWPLEESSMIRYPLNGRPTAFWRGDWY 116

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           +G   + +R   R A              L +         +         +    Q+  
Sbjct: 117 VGKGVACARIRVRLADPSSPRPGAATEHTLSVFNTHTHAPYTENRPGDTYLAHRLAQSWE 176

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSL-------- 234
           +   +    E     +  GDFN +   L            D W+ + P+ SL        
Sbjct: 177 MAKLLRGAAERGHLALAMGDFNMRPLSLPYRIVTAHAPVRDAWRALHPDSSLGAVDDPLE 236

Query: 235 ----------------IRFPKEKDSRCNANKNLRNKI--------------------PID 258
                                +           + K                      +D
Sbjct: 237 TARGRPVPTADFNLEENGATSDHAYNTWRWPKEQQKNLGKGREKVAVSPDAPDRKGKRLD 296

Query: 259 YFVMDQNAYKFLIQESFSEILYN---EDDIKSRGKRLSDHCPISIDYDF 304
           Y        +      +          D   + G  LSDH  +     +
Sbjct: 297 YIFFSSAPSRDGEGGEWVVRSARVGMVDPHSTLGCSLSDHYSVEATLSY 345


>gi|296803815|ref|XP_002842760.1| inositol phosphosphingolipids phospholipase C [Arthroderma otae CBS
           113480]
 gi|238846110|gb|EEQ35772.1| inositol phosphosphingolipids phospholipase C [Arthroderma otae CBS
           113480]
          Length = 524

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/349 (11%), Positives = 73/349 (20%), Gaps = 83/349 (23%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              K+ ++S+N   L       + K   +R       L     +   +IV LQE  +   
Sbjct: 10  SPHKINIISFNCWGL-----KFISKYRRERLLEIGKRLAN--ADFPPEIVGLQECWTQED 62

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAK 134
              +  +    + Y                    +A+  K        +         A 
Sbjct: 63  YNAIRNETRHILPYGKFYHSGIFGG--------GLAILSKWPIEESSMFQYPLNGRPTAF 114

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   +      + I      V  +           E   S  C   + QA  +   
Sbjct: 115 FRGDWFVGKGVAYARIRIGPGSKDVAAVFCTHLHAPYEREPNDSYIC-HRTAQAWEIAKL 173

Query: 195 ITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDPN--------------- 231
           +    E     +  GDFN                  D W+ + P                
Sbjct: 174 MRGAAERGHLVIGLGDFNMLPLSFAHRLITAHAPVRDVWRYLRPESSIGAAIDDVEIARN 233

Query: 232 ------DSLIRFPKEKDSRCNANKNLR----------------------NKIPIDYFVMD 263
                 D  I                                           +DY  + 
Sbjct: 234 RPIPSADFNILENGATCDGAFNTWRWSKEDQKRIAREGHISVDGSLPDPYAKRLDYIFVG 293

Query: 264 QNAY-----KFLIQESFSEILYNEDDIKSRGKRL------SDHCPISID 301
             +Y       +   S  +   +   +    +        SDH  +   
Sbjct: 294 NGSYLNHDDDGVHSSSSWKWNIHSARVGMMERHPTLHCSLSDHFSVEAT 342


>gi|21911243|ref|NP_665511.1| putative RgfB protein [Streptococcus pyogenes MGAS315]
 gi|28896619|ref|NP_802969.1| hypothetical protein SPs1707 [Streptococcus pyogenes SSI-1]
 gi|21905456|gb|AAM80314.1| putative RgfB protein [Streptococcus pyogenes MGAS315]
 gi|28811873|dbj|BAC64802.1| hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 272

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 74/280 (26%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF------------------- 92
                L ++      DI+ LQE+             ++                      
Sbjct: 19  KKLFDLAEHILAEKYDIICLQEINQLIESELAMELPSYQPIPGTPTIHKDHFALLLIHYL 78

Query: 93  ---YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+  K       S  L+ A D  +    RR++   
Sbjct: 79  KKRGQHYYWSWAYNHIGYDIYHEGVAILSKQPI--HVSDILVSAMDDETDYHTRRSLVAK 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            +++GK++ V+++HL  F                        +    +      P ++ G
Sbjct: 137 TKLDGKEVAVVNVHLSWFDKG----------------FLGEWEKLEKELLTLNCPLLLMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQ 264
           DFN   N  G        ++  DS                 +  ++ +    +D+    +
Sbjct: 181 DFNNPTNQEGYQVIMGSPLNLQDSHKVADHVFGDHSIVADIDGWEDNKEAFKVDHVFTSK 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +         F                +SDH  + +   +
Sbjct: 241 D---------FIIRSSKIIFEGGDAPVVSDHYGLEVTLGW 271


>gi|37681240|ref|NP_935849.1| extracellular nuclease [Vibrio vulnificus YJ016]
 gi|37199991|dbj|BAC95820.1| predicted extracellular nuclease [Vibrio vulnificus YJ016]
          Length = 1102

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/386 (11%), Positives = 90/386 (23%), Gaps = 112/386 (29%)

Query: 23  KVRLVSWNI-NTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEM 74
            +++ + N+ N  +   G    +    R              + +    LDADIV L E+
Sbjct: 554 TIKVATQNVLNYFNSPYGGHGNQFGDNRGAKSQQEFERQQAKIVEAIYGLDADIVGLMEV 613

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT---------------------- 112
            +         +       +     N+  R ++  IH                       
Sbjct: 614 ENNGFGDFSAIRELLEALNAKYDQENYGDRFNSQSIHNRYVFVGFDKNGDQVLDQFDTIG 673

Query: 113 ------AIAVRKKNVRVLQQSYPLLGAKD--------------------SFSRAGNRRAV 146
                  +  R   V +       +  +D                       +   R  +
Sbjct: 674 SDVITSGVIYRPSKVALYAGKVIEMPWQDAPMVIDEDGEPVLDSKGEVAESGKNYQRNTI 733

Query: 147 ELLVEI--NGKKIWVLDIHLKSF---CFLD---SLENTYSPSCSLLSQQAQWLKDWITQK 198
                +    K + V   HLKS    C+ D   +         S  + +         + 
Sbjct: 734 AATFRVLNTDKLLTVAINHLKSKGSTCWDDYVGTKAVDNDAQGSCENFRVASTYHLGEEL 793

Query: 199 KESLVPFVIAGDFNRKINYLGN----NDDFWKTIDPNDS--------------------- 233
            +     V+ GD N   +        ++   K +   D                      
Sbjct: 794 AKIGGDQVVLGDMNSYAHEDPMLVLTSNPTGKELKAADYVKVGNKWLFNAEQGPVISKTF 853

Query: 234 ----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR- 288
                + +   +     +         +D+ ++  +  K L+      I   E  +    
Sbjct: 854 GYINAVDYKTPEGETSWSYSYNDEVGSLDHLLISSSLEKRLVDAVDWHINAPESALFDYS 913

Query: 289 ------------------GKRLSDHC 296
                               R SDH 
Sbjct: 914 NKYKGGNANEANPFYAETAYRSSDHD 939


>gi|118484521|gb|ABK94135.1| unknown [Populus trichocarpa]
          Length = 315

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 77/318 (24%), Gaps = 66/318 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++++N++           ++S         L      N    I+  Q       V  
Sbjct: 4   SLTVMTFNLH-------EDQAEDSPNSWEKRKDLCISVITNYSPMILCTQ-----QGVKT 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDS 136
                  C+    +  I+       +D H  I   K+ V +L+         P +    S
Sbjct: 52  QLDYLQQCLPGYGQFGISRKGSQDASDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSLS 111

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  A    A     ++ G +       + +    +        S  L  Q    L     
Sbjct: 112 WGAAAPCIATWATFQLKGIEPPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASL----- 166

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNL 251
                 +P V  G FN +           +      +          + +++    +   
Sbjct: 167 ---PPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDMRDTWPNARVRENHSLIHTYH 223

Query: 252 RNKI---------------------------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
             K                             +D+ +                +    +D
Sbjct: 224 GFKGDKQGALEFFKLILRALCLCWDRQTQDLHVDWILFRGR-------SLIPVLCEVVND 276

Query: 285 IKSRGKRLSDHCPISIDY 302
                   S H PI  ++
Sbjct: 277 NIDGNYPSS-HYPIFAEF 293


>gi|146414275|ref|XP_001483108.1| hypothetical protein PGUG_05063 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 468

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 90/343 (26%), Gaps = 77/343 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMGS 76
           + +  +RL+++N   L       + K    R  +    L         D DIV LQE+  
Sbjct: 21  TNSANIRLLTYNTWGL-----KYVSKYRRFRLCAIADRLANAVPGSQDDYDIVALQEVWC 75

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLG 132
                       W    S    +   +R+ N+ I T     I  +          +P+ G
Sbjct: 76  SED---------WEYLSSRCENLYPYRRNFNSGIITGPGLCILSKVPIKETFLYRFPING 126

Query: 133 AKDSFSRAGNRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              +F R        + + +     K  +    L S           +      + QA  
Sbjct: 127 RPSAFFRGDWMVGKSISVTLLQPHTKGALPIALLNSHMHAPYALTGDAAYSCHRACQAWD 186

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTI--------DPNDSL 234
               +   K +    V  GD N +   L           +D W  +        +     
Sbjct: 187 FTKLVRMLKRAGYAVVQVGDLNSRPGSLPYKLFTVEGGLEDSWDVLGSVSGKKAEDVAPP 246

Query: 235 IRFPKEKDSRCNA------------------------------NKNLRNKI-----PIDY 259
           +       +                                  N    N+       +DY
Sbjct: 247 VDVNVGPMASATPAIGPAGITPIAEMSPEDQILIGGVTCNSTLNTWRANRRLSEACRLDY 306

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++D+     +       + + E         LSDH   S++ 
Sbjct: 307 ALIDKATVLPINAA----VRFTEVSESPYNCSLSDHFAYSVEL 345


>gi|302307117|ref|NP_983679.2| ACR277Cp [Ashbya gossypii ATCC 10895]
 gi|299788845|gb|AAS51503.2| ACR277Cp [Ashbya gossypii ATCC 10895]
          Length = 378

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/361 (11%), Positives = 96/361 (26%), Gaps = 61/361 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLR 58
           MI + +L +            ++  L+++N+        +  +      K+    + LL 
Sbjct: 19  MINRQLLPVYSGSASAGCRSERRFNLLTYNMLSPYYMWPQVYTYVPEPFKKWEYRHKLLE 78

Query: 59  -QYAKNLDADIVFLQEMGSYN----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            +      ADI+ LQE+   +       ++  +  +   Y+ +    + KR         
Sbjct: 79  YELFHKYHADILCLQELTGKDYEKFWRKQMKRRMNFESQYAQKPPPAYWKRSQEEMDGVG 138

Query: 114 IAVRKKNVRVLQQSYPLLGA--------------------KDSFSRAGNRRAVELLVEIN 153
                     +      L                       D+      +++++ ++   
Sbjct: 139 TFYNADKFEHVATDLEYLSDTLGVLTPTEKEWMAQTQVEVTDATGHVVEKQSLKTVLTQR 198

Query: 154 GKKIWVLDIHLKSFCF------LDSLENTYSPSCSLLSQQAQWLKDWITQ------KKES 201
            +    + +  K                      +      + LK  + +         S
Sbjct: 199 NQVCLFVTLLHKPTGSLFVVVNTHLYWKYDEVKLAQCFIIMRRLKAIVKRLLTRKDTSYS 258

Query: 202 LVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
            +  +++GD N   + L                  +     ++ +          D+ C 
Sbjct: 259 NIKVLLSGDLNSSQDALSVRFLRGQVVKVAGLEFQNPMRSFLNGSLYDYIPKDSFDNTCY 318

Query: 247 ANKNLRNKIPIDYFVMDQN----AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + K    K   DY                +E   E+              SDH PI  ++
Sbjct: 319 SGKI---KGIFDYVWFHGRDFRLLQVLSGKEVSEELSSTAQTGLPNELHPSDHIPIYAEF 375

Query: 303 D 303
           +
Sbjct: 376 E 376


>gi|149579978|ref|XP_001508122.1| PREDICTED: similar to Angel homolog 1 (Drosophila) [Ornithorhynchus
           anatinus]
          Length = 689

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 68/216 (31%), Gaps = 24/216 (11%)

Query: 19  SVAQKVRLVSWNINTLSE----QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           S A +  ++S+NI          E        +      +  L Q  ++ D DI+ LQE+
Sbjct: 259 SSAFQFTVMSYNILAQDLVHQCPELYLHCHPDILSWDYRFANLLQEFQHWDPDILCLQEV 318

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +   ++ P      F S      + +R        AI  +    R+L  S       
Sbjct: 319 QEDHYWEQLEPALRMMGFTSF-----YKRRTGRKTDGCAICYKHTRFRLLSSSPVEYYRP 373

Query: 135 DSFSRAGNRRAVELLVEING---------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                  +   + LL++  G           + V + HL        ++           
Sbjct: 374 GLELLNRDNVGLVLLLQPLGPESLGPGAAGPLCVANTHLLYNPRRGDIKLAQIAILLAEV 433

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            +   L+D      +S  P ++ GD N   N    +
Sbjct: 434 DKMARLED------DSYCPIILCGDLNSVPNSPLYD 463


>gi|150377262|ref|YP_001313857.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
 gi|150031809|gb|ABR63924.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
          Length = 268

 Score = 60.3 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/290 (11%), Positives = 77/290 (26%), Gaps = 34/290 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-------YAKNLDADIVFLQEMGS 76
           +R++S N         +  +  S K        + +       +    D D+   Q    
Sbjct: 1   MRILSLNAWGGRIHNPLLKYLGSTKADILCLQEVVRTSGQPHGWLTYRDGDLRLPQRSNL 60

Query: 77  YNAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRV---LQQSYPLLG 132
           ++ +  + P +    F     L  +   R+  ++   A  VR+    +   L   +    
Sbjct: 61  FDEIRALLPAHRAQFFPVARGLLHDDYGREIWSEFGLATFVRESYATIGEALGFVHGAFT 120

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                     R A  + V      ++     +         +          ++Q+  L 
Sbjct: 121 PDSWGEHPRARNAHCVRVFDPDSGLYATIAQMH-----GLRDPAGKGDTPARAEQSMRLV 175

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             I          V+ GDFN            +  +              +    +   +
Sbjct: 176 KLIESVWPGDERLVVCGDFNLLPQSS-----TFARLATLGLSDLVTGRGYTDTRTSFYEK 230

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                DY +++      +    F  +             +SDH P+ +  
Sbjct: 231 EGRFADYMLVN----DRVDVVGFEVV---------ADPEVSDHRPLLLKL 267


>gi|270262471|ref|ZP_06190742.1| endonuclease/exonuclease/phosphatase [Serratia odorifera 4Rx13]
 gi|270043155|gb|EFA16248.1| endonuclease/exonuclease/phosphatase [Serratia odorifera 4Rx13]
          Length = 360

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/251 (9%), Positives = 59/251 (23%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L         D++ + E  S+    ++ P              N           
Sbjct: 113 RQADKLLALVATERPDVLVVVETDSW-WEQRLAPLEQDYPHSLKCPQDNL---------- 161

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + V  +      +   L+  +                   G+++ +  +H       +
Sbjct: 162 YGMHVYSRLKLSDAEIQYLVDKEIPSMHMMVHLPQ-------GQQVRLHCVHPMPPSPTE 214

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + E+    +          L        +S  P ++ GD N               +  +
Sbjct: 215 NDESEDRDA---------ELVMVGKSVAKSAFPVIVTGDLNDVAWSTTTRL----FLKVS 261

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   + P+D+     +              +    ++     
Sbjct: 262 GLLDPRRGRGMFSTFHAGYPFLRWPLDHVFHSDD--------------FVLGSLRRLTHV 307

Query: 292 LSDHCPISIDY 302
            SDH PI ++ 
Sbjct: 308 GSDHFPILVEL 318


>gi|255263333|ref|ZP_05342675.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62]
 gi|255105668|gb|EET48342.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62]
          Length = 399

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/349 (12%), Positives = 94/349 (26%), Gaps = 76/349 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKN--SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + S+N+  L   +         + +        L      +DADIV  QE+   +A+ 
Sbjct: 4   FTIASFNVKNLIGADQEYYKFEKYTPEEHAWKEDWLADQLLTMDADIVGFQEIFDEDALR 63

Query: 82  KVFPKNTWCIFYS-----TERLINHSKRDSNND------------------------IHT 112
            +  +       S      +R   ++++                                
Sbjct: 64  MLIDETDRLGILSNEASIPDRSKRYARKAIFRKLAFTPYADAALVFAPNANDGKPGHRRP 123

Query: 113 AIAVRKKNVR---------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI 157
            +A+  +                  +  Q            +  +R  ++  V +    I
Sbjct: 124 GVAILSRYGFKGQPEVLQELDEPLHIPFQDLDGSDGGHYTIKRISRPILKARVPVGDAVI 183

Query: 158 WVLDIHLKSFCFLDSLENTY--------------------SPSCSLLSQQAQWLKDWITQ 197
            V + HLKS                                 +      +A  L+D I  
Sbjct: 184 TVFNCHLKSKLGEFPRPAGQPHAPEADLTQYDAVGRSMGALRAGLRRMAEAWVLRDAIVS 243

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           + E+  P ++ GDFN   + + +     ++   N + +R    + S          +I  
Sbjct: 244 EIEAGNPVMVLGDFNDSEHAVSSEIINGESPFKNYAWMRRHDAQRSNERYTDAENLQIRE 303

Query: 258 D----------YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           D             + ++    +   +F  +  + D I        DH 
Sbjct: 304 DIESRRLHSAEKLFVRKSLRDMVYTSAFGGVFESIDQIMMSRHFHPDHD 352


>gi|157129237|ref|XP_001655326.1| synaptojanin [Aedes aegypti]
 gi|108872261|gb|EAT36486.1| synaptojanin [Aedes aegypti]
          Length = 1186

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/332 (12%), Positives = 82/332 (24%), Gaps = 57/332 (17%)

Query: 23  KVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ---YAKNLDA--------DI- 68
            +R+   ++N+N       V+    S+     D   L +                  DI 
Sbjct: 501 DLRIACGTYNVNGGKHFRSVAYKDVSLADWLLDCHRLARSKSLVDVSHPEDSNEPPIDIF 560

Query: 69  -VFLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKK 119
            +  QE+   NA   V         W          +             +     +R +
Sbjct: 561 AIGFQEIVDLNASNIVAASSDNAKAWAEELQKVISRDEEYVLLTYQQLVGVCLYIYIRPQ 620

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           + + ++               GN+ A  +   I+G  I  +  H  +     +  N    
Sbjct: 621 HAQYIRDVAIDCVKTGLGGATGNKGAAAIRFVIHGTSICFVCAHFAAGQSQVAERNADYA 680

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDD 223
             +        +   + +  +S       GDFN +I+   +                 D 
Sbjct: 681 EITRK------IAFPMGRSLKSHDYIFWCGDFNYRIDMEKDELKDLLKQGDIGAVLQYDQ 734

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLI 271
                +       F + + S     K                    D  +  +       
Sbjct: 735 LRIQQNTGSVFNDFLEGEISFPPTYKYDLFSEDYDTSEKCRAPAWTDRVLWRRRKQSPDA 794

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +  +    N         + SDH P+    D
Sbjct: 795 DKHPNWNPGNLVHYGRAELKQSDHRPVIAIID 826


>gi|160879679|ref|YP_001558647.1| endonuclease/exonuclease/phosphatase [Clostridium phytofermentans
           ISDg]
 gi|160428345|gb|ABX41908.1| Endonuclease/exonuclease/phosphatase [Clostridium phytofermentans
           ISDg]
          Length = 367

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 91/323 (28%), Gaps = 63/323 (19%)

Query: 23  KVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           +  ++++NI               G      + +    +     +  K+ D D VF+QE+
Sbjct: 59  EYSILTYNIGFGAYSSDYSFFMDGGKFSRAYNKQAAIDNINGSIKVVKSKDTDFVFIQEV 118

Query: 75  G-----------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
                       +   +      ++          + +   + +      I+   K   +
Sbjct: 119 DLKATRSYGVNENEMILDAFQDISSAFAVNYDSPYLMYPILEPHGKSKAGISTISKFRII 178

Query: 124 LQQSYPLLGAKDSFSRAGN-RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                 L      +      R      +++ NGK + + ++HL +          Y+   
Sbjct: 179 DSVRRSLPIDTSVYKLIDLDRCYTISRIKVENGKYLCLYNVHLSA----------YTKDE 228

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
           S++  Q + L + +    E     +  GDFN+ +     +     T++ N +        
Sbjct: 229 SIVKNQIKMLSEDMKSDFEEGNYIICGGDFNQDLLGDSPSIFHTPTLEENWAKPFPSLLL 288

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE----------------------SFSEIL 279
            S      +          ++       L                           + + 
Sbjct: 289 PSGITVAYD----------LLSDELRGKLTPSCRNADSPYIKETSFVTMVDGFLISTNVQ 338

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
            N  +    G   SDH P+ + +
Sbjct: 339 LNSIETIDNGFLYSDHNPVIMKF 361


>gi|303278017|ref|XP_003058302.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460959|gb|EEH58253.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 374

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 62/213 (29%), Gaps = 16/213 (7%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            ++ +++WN+  L     +     + K        + +    L  D D++ LQE     +
Sbjct: 45  GQLSVLTWNVQLLP--GKLPGQAGTAKHLLIRAASIARQINALASDVDVIALQEAWHAPS 102

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +         ++                   +   ++         P          
Sbjct: 103 REVILETTRRFFPHAHAPDDARCGLV--------LLSAREFPHARATFAPFKAKSGIEGW 154

Query: 140 AGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             ++      +E   GK++ VL+ HL+S  +    E        ++   A  ++      
Sbjct: 155 WFDKGVTATTLETRGGKRVVVLNAHLQSDFWQPRAETRAKQFPEIVDALADAVRA--GGG 212

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           ++ +   ++ GD N             K +   
Sbjct: 213 EDGVDAALLCGDLNVAAGS-EEYRAMMKALSGG 244


>gi|226360305|ref|YP_002778083.1| hypothetical protein ROP_08910 [Rhodococcus opacus B4]
 gi|226238790|dbj|BAH49138.1| hypothetical membrane protein [Rhodococcus opacus B4]
          Length = 320

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/293 (8%), Positives = 68/293 (23%), Gaps = 59/293 (20%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            ++    ++   ++ ++  NI   +                +D   L +  ++ D D++ 
Sbjct: 84  LYVANSASASGPELTVMQANIWLGN----------------ADADSLVRQIRDRDVDVLT 127

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           + E+                + +S        +            +  +     +  +  
Sbjct: 128 VNELTPEAVDRLGAAGLDATLPFSFLMPGGGGEGTG---------IWSRYPLADKVHHSE 178

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                         A+   VE+       L        +                     
Sbjct: 179 FVLS----------ALSARVELPDGASTALYAFHPVPPWPSDPSLWSRE--------MDR 220

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +   +        P +++GDFN   +++   +            +    +     +    
Sbjct: 221 IAAILDTIPADSGPVIVSGDFNSTRDHVKYRNLVTGRYRDAADQVGAGIQNTYPADRQPF 280

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               I ID+ V      + +     +                SDH  +     
Sbjct: 281 P-PMIAIDHIVTSDAQAQSVESVVLT---------------GSDHRGLVARIT 317


>gi|255551567|ref|XP_002516829.1| hydrolase, putative [Ricinus communis]
 gi|223543917|gb|EEF45443.1| hydrolase, putative [Ricinus communis]
          Length = 490

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/282 (9%), Positives = 73/282 (25%), Gaps = 77/282 (27%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNND 109
             + +  + +DAD++ LQ++ +        ++ +         ++     ++        
Sbjct: 218 RSILEVLREVDADVLALQDVKAQEEKGMRPLSDLAASLGMKYAFAESWAPDY-------- 269

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFC 168
                A+  K      +   +   +D       R  ++  + + G  ++      L    
Sbjct: 270 ---GNAILSKWPIKRWKVQKIANDEDF------RNVLKATISVPGAGELDFYCTQLDHL- 319

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-GNNDDFW-- 225
                      + +   +Q   +         +  P V+AG  N                
Sbjct: 320 -----------NENWRMKQINAIIQ------STNSPHVLAGGLNSLTGSDYSPERWMDIV 362

Query: 226 ----------------KTIDPNDSLIRFPKEKD--------SRCNANKNLRNKIPIDYFV 261
                             +   + +       +           N     +    +DY +
Sbjct: 363 KYYEEIGKPRPKIEVTNFLKGKEYIDAKDFAGECEPVVIIAKGQNVQGTCKYGTRVDYVL 422

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             Q++    +  S++ I              SDH  + +D  
Sbjct: 423 ASQDSPYKFVPGSYTVISSKGT---------SDHHIVKVDIT 455


>gi|111225389|ref|YP_716183.1| hypothetical protein FRAAL6045 [Frankia alni ACN14a]
 gi|111152921|emb|CAJ64669.1| conserved hypothetical protein [Frankia alni ACN14a]
          Length = 263

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 75/313 (23%), Gaps = 89/313 (28%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +RL S+N+ + LS  +G             +          L AD++ LQE+      + 
Sbjct: 1   MRLGSFNVMHGLSLADG-----------RVEPHRFAAAVAGLGADVLGLQEVDLDQPRSG 49

Query: 83  VFPKN------------TWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQ 125
                             W    +         R +            IA+         
Sbjct: 50  GVDLAAESAAALGAADGNWRFVPTVFGTPGAGWRPAEGARRPGEPAYGIALISLLPVREW 109

Query: 126 QSY----------------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           +                  P    +        R AV   ++  G  + V+  HL     
Sbjct: 110 RVIDLGRAPVRSPIAIPGGPNGPGRLILLDDEPRVAVAARIDTPGGPLTVVTTHLSFVPG 169

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            ++L+                         +   P ++ GD N               + 
Sbjct: 170 WNALQLLRLSRR----------------LADVDGPLIVLGDLN---------------LP 198

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                      + +          ++ +D+ +                 + +   +  + 
Sbjct: 199 GRLPAALTRWRRLAVTPTYPAHAPRVQLDHVLARGP-------------VGDVTAVLCQR 245

Query: 290 KRLSDHCPISIDY 302
             +SDH  + +D 
Sbjct: 246 SEISDHRALLVDL 258


>gi|115786070|ref|XP_794902.2| PREDICTED: similar to LD24865p [Strongylocentrotus purpuratus]
 gi|115970471|ref|XP_001197586.1| PREDICTED: similar to LD24865p [Strongylocentrotus purpuratus]
          Length = 212

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 65/200 (32%), Gaps = 22/200 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ +V+ N   L             K  +     + +   +   DIV LQE+        
Sbjct: 2   ELNVVTLNCWGL--------PFGVSKHRSERMQHIAKELASGAYDIVSLQEIW------- 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF----- 137
              ++   I  + E+++ HS       +H  + +  K   +    +P      +      
Sbjct: 47  -VMEDYQLIKSTVEKVLPHSFYFRMGMLHGGLCIFSKWPIIDTFYHPYSLNGYAHKVTMA 105

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
               ++      +++ G  + V + H  +     ++        +    Q   L +++  
Sbjct: 106 DWYISKMVALCKLDVEGMTVNVYNTHAHALYAPSNIPEKD-EFLTHRLTQLYELSEFVRL 164

Query: 198 KKESLVPFVIAGDFNRKINY 217
              +    ++ GDFN +   
Sbjct: 165 TSGAADLVLVTGDFNSEPFS 184


>gi|322703506|gb|EFY95114.1| exonuclease III [Metarhizium anisopliae ARSEF 23]
          Length = 654

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 88/329 (26%), Gaps = 82/329 (24%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           + ++  +VP    + +++ ++S+N+            K              ++  N  A
Sbjct: 304 ITVIIPVVPQGEPLVKELTILSFNLWFGGTPVKDYHAKQ------------VRFITNARA 351

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           DIV LQE    +A+ ++     W  +                     + +  +   V Q 
Sbjct: 352 DIVGLQESTGGHAI-RLAKAMGWDYW-----------------QGDDVGIISRYPMVEQ- 392

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS---- 182
                     ++      AV + ++  G++I   + HL    +          S      
Sbjct: 393 ----------YAPIERCGAVRIALD-RGQEINFWNCHLGYTPYGPYDFCFDHLSPEEVLK 441

Query: 183 -----LLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                  + Q   +   +     + S  P +  GDFN   ++L   +   K         
Sbjct: 442 NEIKSRRTPQIINIMKHMQDHLSQSSKTPVIFTGDFNA-PSHLDWTNATKKLHCGQGYFP 500

Query: 236 RFPKEKDSR--------------------CNANKNLRN------KIPIDYFVMDQNAYKF 269
               +                          +   L N      K  ID+        K 
Sbjct: 501 WPTSKHPIDAGLIDSFREVHSDPLVQPGLTWSPIYLDNGGRTEPKDRIDFIYHKG--LKT 558

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              E+               +  SDH  +
Sbjct: 559 HSSEAVVVGQPKAQPDHYHNEWPSDHAAV 587


>gi|322488807|emb|CBZ24054.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 645

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 76/302 (25%), Gaps = 62/302 (20%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           V   A+    +R++S+N+  +             K   +         ++   D++ LQE
Sbjct: 4   VSTFAAGELPIRVLSFNLWGIFN----------SKMREARMKAFATKIEHY--DVILLQE 51

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             S      +F                     S      A+  R    +    ++PL G 
Sbjct: 52  QFSAEDFDLIF---QHASPVVQRTYTFRRFCSSFYGSGCAVISRYPICQAFFHTFPLQGC 108

Query: 134 KD---SFSRAGNRRAVELLVEIN---------GKKIWVLDIHLKSFCFLDSL--ENTYSP 179
            +         N+ A  + V +            ++ +   HL +     S         
Sbjct: 109 PEMVLHGDFFANKGAAMVRVMVPVTMEDGSAAKAQVTLYTTHLVAVYEKVSQLSSWKRER 168

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-------------- 225
                  QA    D+I          +I GDFN     L                     
Sbjct: 169 YLPFRISQAISFADFIVSTSRPTDRIIIGGDFNCSQRSLEVQMMLILLKRCGYNMHSVLP 228

Query: 226 --KTIDPNDSL--------IRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNA 266
             + +    ++          F     +  N+ K                ID+    + A
Sbjct: 229 PPRALRDAATVGQECDDVQRFFTYSDRNAFNSMKTSYFKLLKLEADIPSQIDHIFFSRPA 288

Query: 267 YK 268
           + 
Sbjct: 289 FA 290


>gi|257896680|ref|ZP_05676333.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium Com12]
 gi|257833245|gb|EEV59666.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium Com12]
          Length = 273

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 68/282 (24%), Gaps = 53/282 (18%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMG--------SYNAVAKVFPKNTWCIFYST------- 95
                 L +     D +++ LQE+             + K  P                 
Sbjct: 14  EKKLQELAEKILLEDYEVIALQEINQLLESEEADPPKLTKFCPVENQVPIRKDNFAYCLV 73

Query: 96  ---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                                +      A+  K    L+     +           R+ +
Sbjct: 74  QLLKEQGKEYFWSWEMSHIGYDKYEEGNALLTKRP--LESQVLTVSESQKKEDYRTRKIL 131

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
               +I+ + I+V   H   +    S       +      + +              P  
Sbjct: 132 IGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFFETRA-------------PLF 178

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFV 261
             GDFN   +  G +      +   DS +   ++  +       +  +    K+ ID+  
Sbjct: 179 FLGDFNNPADSEGYHIVKKSGLLLQDSYVIANEKGKAATVEKKIDGWEQNTEKLRIDFIF 238

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +          E      Y           +SDH    I+ D
Sbjct: 239 V---------PEGVQVKKYQRIFDGIDSPIISDHYGAEIEID 271


>gi|238060298|ref|ZP_04605007.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
 gi|237882109|gb|EEP70937.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
          Length = 238

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 78/280 (27%), Gaps = 59/280 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+VS+N+++  +   V                              +QE     A  +
Sbjct: 12  PLRVVSYNVHSQRDDTAVLAAVVRAVAPDVVI----------------VQE-----APRR 50

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +        +  L+  +    +       ++R + +    Q YPL   +        
Sbjct: 51  FRWRQKCASLAESFGLVVAAGGLPSLGNLLLTSLRVRVLDTRCQRYPLTPGRHM------ 104

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R A      + G +  +   HL             S   +    QA   K  +     + 
Sbjct: 105 RGAAYADCRVGGARFLLAGSHL-------------STDPAERPAQAAAFKREL---AAAD 148

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P V   D N   +        W T+              +          +  ID   +
Sbjct: 149 LPVVAGADLNEGPDG-----AAWATV-GQGLTDAAVAADRADRLTYSCADPRRRIDAVFV 202

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D            + + Y+  D   + +R SDH PI +D 
Sbjct: 203 DPR---------ITVVDYDVVDTP-QARRASDHFPIVVDL 232


>gi|302846967|ref|XP_002955019.1| hypothetical protein VOLCADRAFT_106614 [Volvox carteri f.
           nagariensis]
 gi|300259782|gb|EFJ44007.1| hypothetical protein VOLCADRAFT_106614 [Volvox carteri f.
           nagariensis]
          Length = 831

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/355 (9%), Positives = 88/355 (24%), Gaps = 74/355 (20%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           V ++V  + P   S   +  ++++N+  +  ++ +  +               L +   +
Sbjct: 202 VRSMVQMVPPSQQSNVGRFTILTYNLLADLYAKADCSNTCPAWCLHWHYRKRNLLRELLS 261

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
             ADI+ LQE+ S + +    P+     + +  +         N       A   +  R+
Sbjct: 262 HKADILCLQEVQSDHYLDFWAPELQRAGYVAIYKKKTTEIYTDNKYAIDGCATFFRRDRI 321

Query: 124 LQQSYP------------------LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
                                    L   +  +    ++A    +  +   +  +   ++
Sbjct: 322 DPSIGKGLLRFSLVKKYEVEFNKAALSLAEGMTNPQQKKAALNRLLKDNVALIAVLEAIE 381

Query: 166 SFCFL-----------DSLENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNR 213
                           ++  +       +   Q   L   + +    + +P ++AGDFN 
Sbjct: 382 PGTPDAGTRRTLICVANTHIHANPELNDVKIWQVHTLLKGLEKIAASADIPMLVAGDFNS 441

Query: 214 KINYLG------------------------------------------NNDDFWKTIDPN 231
                                                            +          
Sbjct: 442 IPGSPAHCLLVNGKIDASMMDAANDPLHLLKDQKMSHSLPLSSAVAHMYDAPLSADGKLY 501

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
               R   +             K  +DY     ++ +  +  S     ++ +   
Sbjct: 502 KQRQRLDAKHHEPLFTILTKEFKGTLDYIFYTTSSLQGRVSCSGDSGTFSVNRAL 556


>gi|149924964|ref|ZP_01913291.1| hypothetical protein PPSIR1_13800 [Plesiocystis pacifica SIR-1]
 gi|149814166|gb|EDM73782.1| hypothetical protein PPSIR1_13800 [Plesiocystis pacifica SIR-1]
          Length = 269

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/290 (10%), Positives = 80/290 (27%), Gaps = 49/290 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADIVFLQEMGSYN 78
              +++WN+                KR+      + ++  + D     D+  L E+    
Sbjct: 2   SFSVLAWNVRKFGG-----------KRSKVRVERVAEFIHSFDEGRGPDVFGLFEIEQGR 50

Query: 79  AVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            V  ++     +  + +           +       +  +   V            ++  
Sbjct: 51  VVNALYNDFPDYDFYMTDGPQSLEMVVAA----RHGVFGQASFVV----------KREFR 96

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R    L V+    +  +L +H+ S        N  +    + S + + L      
Sbjct: 97  GAPHLRPGAMLTVKYGNYRYPLLFLHIDSGRTPADFGNRTATIAKVYSLE-RALTK---- 151

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-----------RFPKEKDSRCN 246
             +     +  GDFN        ++   + +   + +                +  +R  
Sbjct: 152 --QGNPRLIALGDFNTMGMAYPRDNLDNERVSEEEEIAIMAKQARSAKMMLADKTHARTW 209

Query: 247 ANKNLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            + +      +D+ +  ++      +       +      +   +R SDH
Sbjct: 210 HSSSRSQSADLDHVLHSKHVELVEPVLVRGWVDMPTVAKRRQWIERYSDH 259


>gi|255513505|gb|EET89771.1| Endonuclease/exonuclease/phosphatase [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 256

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/303 (9%), Positives = 81/303 (26%), Gaps = 70/303 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMGSYNAV- 80
           +R+VS N+                      Y+ L ++   K    DI   QE+   N+  
Sbjct: 1   MRIVSLNVWGG-----------------RVYSKLAEFLEGKKTGVDIFCFQEVLDANSKT 43

Query: 81  --AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-----KNVRVLQQSYPLLGA 133
                  K ++      E    + + ++                 + + +  ++      
Sbjct: 44  GNEAKATKQSYQGTEFEEVQDLYGRLENVLTGFRGFLSASYSEGSEKLAMFVRNGIEADV 103

Query: 134 KDSFSRAGNR------------RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           + +++    R                  +  +    ++ ++H                  
Sbjct: 104 RTAWAHKQIRVLYGGKPFEVGSIMQYAKISNDNGTCFIANVHGLWQGGGKEDTPER---- 159

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                  +  ++ +          ++ GDFN  I+    +      +   +++    + K
Sbjct: 160 ------IEQSRNILRIMSSFGERKILCGDFNLDISTESVH------MLEQETVNLVKEFK 207

Query: 242 DSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +   +     +K    DY                       +        +SDH P+ +
Sbjct: 208 INSTRSALAPSSKGRFADYIFASDKI--------------KINKFNVLNDVVSDHLPLYV 253

Query: 301 DYD 303
           D++
Sbjct: 254 DFE 256


>gi|330469006|ref|YP_004406749.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328811977|gb|AEB46149.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 321

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 87/319 (27%), Gaps = 56/319 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R V++N+  L+             R  +    +    ++L+ D+V +QE+ S  A A  
Sbjct: 1   MRFVTYNLLDLTLTAD-------NLREANRQQRVIDTIRSLEPDVVAVQELKSPPASAAR 53

Query: 84  FPKNTWC-------IFYSTERLINHSKRDSNNDIHTAIAVR---KKNVRVLQQSYPLLGA 133
                         +  +      H+    ++ +HTA+  R          +   P +  
Sbjct: 54  LAAELADRTGLTSTVATNGSARAIHAVAVGDHTVHTALLWRPGLTPLPHTFRTYSPAVHY 113

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
              +   G    V L  +I+G+ I     H  ++          + +      +   L  
Sbjct: 114 DGGWRGIGYGSMVRLAFQIDGQPITFASYHAPAY--GRHRRIDQAEAVLAALTRPHELAL 171

Query: 194 WITQKKESLVPFVIAGDFNRKI--------------------------NYLGNNDDFWKT 227
             +             D++                             +           
Sbjct: 172 IGSDFNSIGAARTNGADYDPDPYTGRPWWPDLVHQCHEPTHPSQRHRADRRPAQVWEAGG 231

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
           +    +  R P +  +          +     +D     Q   + +   +  +       
Sbjct: 232 LHDVAAATRSPWKATTGHWPTCPYGVRGIARRVDTIHATQPVLRAVRSLTVVDNPTT--- 288

Query: 285 IKSRGKRLSDHCPISIDYD 303
                +  SDH P+++D D
Sbjct: 289 -----RAASDHLPVTVDLD 302


>gi|309363312|emb|CAP26914.2| hypothetical protein CBG_06636 [Caenorhabditis briggsae AF16]
          Length = 662

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 72/216 (33%), Gaps = 17/216 (7%)

Query: 13  LVPCTASVAQKVRLVSWNI---------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           ++  + + + +  + S+N+           L                T+ +  L++    
Sbjct: 297 ILSSSPTPSSEFTVCSYNVLCQKTIARTAYLYRHLDQCQGF---LEWTNRWKGLQEEIPT 353

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            +ADI+ LQE+ + + +    P      +    +    ++     D   A+  R      
Sbjct: 354 FNADILGLQEVQADHYLLHFAPFMKQHGYEGIYKQKFGTEV---KDDGCALFYRPGKFEF 410

Query: 124 L--QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           +  Q+    +      +R    + + L   +  + + V + HL        ++       
Sbjct: 411 VKYQEVNYFVSKSAISNRENIAQILALRCRVTKEVVLVANTHLLFNEERGDVKLAQLAIL 470

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
               QQ +      +    S+ P +I GDFN + + 
Sbjct: 471 FASIQQMRDNLGKQSDFNCSIPPVIIMGDFNMEAHS 506


>gi|268566421|ref|XP_002647550.1| Hypothetical protein CBG06636 [Caenorhabditis briggsae]
          Length = 655

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 72/216 (33%), Gaps = 17/216 (7%)

Query: 13  LVPCTASVAQKVRLVSWNI---------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           ++  + + + +  + S+N+           L                T+ +  L++    
Sbjct: 297 ILSSSPTPSSEFTVCSYNVLCQKTIARTAYLYRHLDQCQGF---LEWTNRWKGLQEEIPT 353

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            +ADI+ LQE+ + + +    P      +    +    ++     D   A+  R      
Sbjct: 354 FNADILGLQEVQADHYLLHFAPFMKQHGYEGIYKQKFGTEV---KDDGCALFYRPGKFEF 410

Query: 124 L--QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           +  Q+    +      +R    + + L   +  + + V + HL        ++       
Sbjct: 411 VKYQEVNYFVSKSAISNRENIAQILALRCRVTKEVVLVANTHLLFNEERGDVKLAQLAIL 470

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
               QQ +      +    S+ P +I GDFN + + 
Sbjct: 471 FASIQQMRDNLGKQSDFNCSIPPVIIMGDFNMEAHS 506


>gi|18309402|ref|NP_561336.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens str. 13]
 gi|18144078|dbj|BAB80126.1| hypothetical protein [Clostridium perfringens str. 13]
          Length = 263

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 74/267 (27%), Gaps = 40/267 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKNTWCIFY---------STERLI 99
                L +       D++ LQE       +       ++ + +               L+
Sbjct: 18  YKIKYLAKTIVEEKYDVIALQEASQSIKASIKEGNLKEDNYGLVLIEEINKLGGEKYHLV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     + +  K+  V  +S+  +      +   +R+ V+  ++IN + I  
Sbjct: 78  WDYSHIGYDIYEEGLCILTKHKIVNSESF-YISKSHCKTFWRSRKIVKATIDINNENIDF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              H+            +       + Q + L   +   KES       GDFN       
Sbjct: 137 YSCHMGW----------WHDKEESFTFQVENL---LAHAKESKNRAFFMGDFNNNAFLKN 183

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKI--PIDYFVMDQNAYKFLIQES 274
              DF K+    D+      +        N      N     ID    ++N         
Sbjct: 184 EGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRNT-------- 235

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISID 301
                          + +SDH  + I+
Sbjct: 236 -KVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|300175117|emb|CBK20428.2| unnamed protein product [Blastocystis hominis]
          Length = 404

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 85/339 (25%), Gaps = 57/339 (16%)

Query: 21  AQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76
              V + S+N+      + +  +               L     + ++D   LQE+    
Sbjct: 37  GTAVTITSYNMLADVYCQPDLYTNCPLWALEWGYRRDRLMHQLSSRNSDFFCLQEVEKSE 96

Query: 77  -YNAVAKVFPKNTW---------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
             N       K  +             S + +   +   +         ++ + V +   
Sbjct: 97  YENFWKVEMEKRGYAGEYTVKTRYFMGSDDHVDGCATFYNTKKSRFLEFLKCRFVLLSAS 156

Query: 127 SYPLLGA-----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                 +     ++ F     R +V L      + +    I   S    +     Y  +C
Sbjct: 157 HLHFNDSLVSQLQEKFLTQVPRGSVRLKRGTVAQILLFSSIPSNSAMPNEPQTQFYLANC 216

Query: 182 SLLS----------QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDP 230
            L            Q  + ++    ++ +  +P VI GDFN +            +    
Sbjct: 217 HLFWDPRFPDVKLQQSLELMRQLEKEEFKMELPAVICGDFNSEPTSAVYEFMSMGRVRGD 276

Query: 231 NDSLIRFPKE------------------------KDSRCNANKNLRNKIPIDYFVMDQNA 266
           +  L   P+                                N        +DY  +  + 
Sbjct: 277 HPDLQNDPENIIRSIGVQNINHKIKLASVYKEVMGSEPKFTNYTDHYAGCLDYIWVSSSM 336

Query: 267 YKFLIQE---SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +      S  EI    D      +  SDH  +    
Sbjct: 337 IIPIKVSVLPSEREIESCGDMRLPNPRYPSDHLALDCTL 375


>gi|168212665|ref|ZP_02638290.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|168216494|ref|ZP_02642119.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens NCTC 8239]
 gi|170715660|gb|EDT27842.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|182381400|gb|EDT78879.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens NCTC 8239]
          Length = 263

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 74/267 (27%), Gaps = 40/267 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKNTWCIFY---------STERLI 99
                L +       D++ LQE       +       ++ + +               L+
Sbjct: 18  YKIKYLAKTIVEEKYDVIALQEASQSVKASIKEGNLKEDNYGLVLIEEINKLGGEKYHLV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     + +  K+  V  +S+  +      +   +R+ V+  ++IN + I  
Sbjct: 78  WDYSHIGYDIYEEGLCILTKHKIVNSESF-YISKSHCKTFWRSRKIVKATIDINNENIDF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              H+            +       + Q + L   +   KES       GDFN       
Sbjct: 137 YSCHMGW----------WHDKEESFTFQVENL---LAHAKESKNRAFFMGDFNNNAFLKN 183

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKI--PIDYFVMDQNAYKFLIQES 274
              DF K+    D+      +        N      N     ID    ++N         
Sbjct: 184 EGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRNT-------- 235

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISID 301
                          + +SDH  + I+
Sbjct: 236 -KVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|302534134|ref|ZP_07286476.1| StaP [Streptomyces sp. C]
 gi|302443029|gb|EFL14845.1| StaP [Streptomyces sp. C]
          Length = 344

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 78/318 (24%), Gaps = 85/318 (26%)

Query: 2   IRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48
           IRK   AL+  L+                +     + + + N++  +     +       
Sbjct: 93  IRKSATALIAILLTAAVWVNLFGGLVTDKSGSGGNLTVAAHNVDADNPDPKGT------- 145

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                     +      AD++ L E+                                 +
Sbjct: 146 ---------AEAVAKSKADVLALTEL---------------KAGAVPVYEKALEGTYKYH 181

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-F 167
            +   + V  K      +   +        R G  RA+   V     +I V   HL S  
Sbjct: 182 AVEGTVGVWSKYPLTSSRPVDI--------RLGWTRAMRTTVASPFGEIGVYVAHLPSVR 233

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
             L++         S  +  A    + +          ++ GD N  +N         + 
Sbjct: 234 VKLNAGFTANQRDNSADALGAALAAEPLKN-------VILLGDLNGTMND--------RA 278

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           +    S +R  +                   ID  ++           +   +       
Sbjct: 279 LSEVTSQMRSTQGAAGNGFGFSWPAQFPMARIDQIMVRGA-----KPVASWTLP------ 327

Query: 286 KSRGKRLSDHCPISIDYD 303
               +  SDH P++    
Sbjct: 328 ----RTGSDHLPVAARLT 341


>gi|307275377|ref|ZP_07556520.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2134]
 gi|306508011|gb|EFM77138.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2134]
 gi|315149596|gb|EFT93612.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0012]
          Length = 274

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFY------- 93
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPIATQTPIHEDNFAYLIVQYLAEK 82

Query: 94  -STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQHYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLAMGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  + +   
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFVSKQ-- 245

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +    Y       +   +SDH  + I  
Sbjct: 246 -------WHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|332322082|emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1379

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 85/284 (29%), Gaps = 60/284 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++SWNI  L+                   + +R+  +    D VF+QE        ++
Sbjct: 1   MSVLSWNIRGLTA--------------RVKRSAIRKLIQKHTPDFVFVQETKMEGISLEI 46

Query: 84  FP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                 +  + ++    + +S    +    +A +++  +V                    
Sbjct: 47  VKTMWKSQDVEWTWYPSVGNSGGLISMWNKSAFSMKSSSVNQHW---------------- 90

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A+         +  + +++  +                    +A   ++ +T  K +
Sbjct: 91  --IAISGSFSRINFECILFNVYNPNTVGA----------------RASVWEEIVTFHKTN 132

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF---PKEKDSRCNANKNLRNKIPID 258
            +P ++ GDFN  +         +  I  ++           + S  N       +    
Sbjct: 133 PLPSLLIGDFNETLEPDDRGSLLFSNIGTDNFKNFLQVMELLEVSPSNKGFTW-FRGR-- 189

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ++    L+        +    +    + LSDHCP+  + 
Sbjct: 190 ----SKSVLDRLLLNPEWINEFPSMRLSLLQRGLSDHCPLLTNI 229


>gi|169343045|ref|ZP_02864073.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|169298955|gb|EDS81029.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens C str. JGS1495]
          Length = 263

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 73/267 (27%), Gaps = 40/267 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKNTWCIFY---------STERLI 99
                L +       D++ LQE       +       ++ + +               L+
Sbjct: 18  YKIKYLAKTIVEEKYDVIALQEASQSIKASIKEGNLKEDNYGLVLIEEIKKLGGEEYHLV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     + +  K+  V  +S+  +    S +    R+ V+  ++IN + I  
Sbjct: 78  WDYSHIGYDIYEEGLCILTKHKIVNSESF-YISKSHSKTFWRLRKIVKATIDINNENIDF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              H+            +     + + Q + L   +   KES       GDFN       
Sbjct: 137 YSCHMGW----------WHDKEEIFTFQVENL---LAHAKESKNRAFFMGDFNNNAFLKN 183

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKI--PIDYFVMDQNAYKFLIQES 274
              DF K+    D+      +        N      N     ID               +
Sbjct: 184 EGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIF---------TNRN 234

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISID 301
                          + +SDH  + I+
Sbjct: 235 TKVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|126643348|ref|YP_001086332.1| catabolite repression control protein [Acinetobacter baumannii ATCC
           17978]
          Length = 229

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 55/220 (25%), Gaps = 48/220 (21%)

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS 166
              +   A+  +   V  +        DS  R      +    ++     + +  ++L S
Sbjct: 29  RAGYAGTAIYSRLPFVSIKDGLGFELADSQGRF-----ISAEFDLGLSHPVHIASLYLPS 83

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--- 223
               +        + +            + Q ++     +I GD+N     +   +    
Sbjct: 84  GSSGE-------EAQARKDLFLGEYAKILKQWRDENKSIIICGDYNIVHKRIDIKNWSGN 136

Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                       +   I      +   +   +         N+           IDY   
Sbjct: 137 QKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYHAC 196

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +     +                + +  SDH P+ IDY
Sbjct: 197 SPDWKARTVNAWV-----------YKDQWFSDHAPVIIDY 225


>gi|239997150|ref|ZP_04717674.1| predicted extracellular nuclease [Alteromonas macleodii ATCC 27126]
          Length = 860

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/359 (11%), Positives = 96/359 (26%), Gaps = 78/359 (21%)

Query: 22  QKVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVF 70
             + + ++N+        +  G   +     R   D          + +   NL+AD+V 
Sbjct: 461 GNLSIATFNVLNYFNGEVDANGDVTFDYDENRGADDEVAFELQEGRIVEAIVNLNADVVG 520

Query: 71  LQEMGS-----YNAVAKVFPKNTWCIFYSTERL---INHSKRDSNNDIHTAIAVRKKNVR 122
           L E+ +      +A+  +       +  + +      +       + I   +  +   V 
Sbjct: 521 LMEIENDGFGEDSAIQSLVNAINAELGETEQYSFIATSDGSEIGTDAITVGLLYKATVVT 580

Query: 123 VLQQSYPLLGA-----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
               +  +        +DS +R         +   + K   V   H KS     + +   
Sbjct: 581 PENDAMVVAMPEQKIDEDSLARMRPSLLQSFVHTESSKSFLVAVNHFKSKGSQCAEDVAE 640

Query: 178 SPSC---------SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------- 219
           +PS          +L    A  L + ++ +       ++ GD N                
Sbjct: 641 APSEITTIQGSCNALRVSAAITLGNALSDESLPERKVIL-GDLNAYSAEDPVAVLTDYTP 699

Query: 220 --------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMD 263
                          ++     ++ +       +E D+   +      +    +D+ +  
Sbjct: 700 ESRGYTITTAVNTGMDEGSSVDVESSFGYHNLAEEFDAEGFSYWFYGTEQVGSLDHVLAS 759

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRG-------------------KRLSDHCPISIDYD 303
           +      I  +   I   E                           R SDH P    +D
Sbjct: 760 EAMLADAIDGAHWNINSVEAYQLQYDQALRYYPDEDGYAFTDVGPFRSSDHDPFIATFD 818


>gi|154340187|ref|XP_001566050.1| pantothenate kinase subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063369|emb|CAM39545.1| putative pantothenate kinase subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1459

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 96/327 (29%), Gaps = 64/327 (19%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKV 83
           R++S+N N L    G              +  +  +  ++DA D+V LQE+ + +    V
Sbjct: 12  RVLSYNFNILPRGSGGY-----------QHERIETFLASIDAYDVVLLQEVYATSYFPYV 60

Query: 84  FPKN--TWCIFYSTERLINHSKRDSNNDIHTAIAVR----KKNVRVLQQSYPLLGAKDSF 137
             K      +     +         +        +R      N  ++   +P+       
Sbjct: 61  LQKQLCYQKMLLDGLKAKGLHYYVISRQPSYLTMLRYNVCSDNGLIIASRFPIWHRGSYT 120

Query: 138 SRAGNRR-------AVELLVEIN------GKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            R   R         +   VE+        ++I   ++HL+    L S  +        +
Sbjct: 121 FRNHERGEATVSKGCLFAEVEVPAAHGEGSQRIVFFNVHLRPQDNLPSESSQMQQVHRFV 180

Query: 185 SQQAQWLKDW--------ITQKKESLVPFVIAGDFN------RKINYLGNNDDFWKTIDP 230
                 +++         + Q+K + VPF+IAGDFN         +      +       
Sbjct: 181 EAALTQVREQHNGNNAPGVRQRKGAEVPFIIAGDFNIYGIDPVTGHSSKRFQEMLNQFQD 240

Query: 231 NDSLIRFPKEKDSRCNAN--------------KNLRNKIPIDYFVMDQNAYKFLIQESFS 276
             S+     E+  +                  +        DYF+        +  E   
Sbjct: 241 IGSVRDVIYEETGQNPPTRPPILFFPELSKLERYESTPQRQDYFLA----EARIQVEKPH 296

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
              Y     +     LSDH  I+    
Sbjct: 297 LEKYVVSRRRPYTY-LSDHFGITCRVT 322


>gi|71660176|ref|XP_821806.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70887194|gb|EAN99955.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 619

 Score = 60.0 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 66/221 (29%), Gaps = 15/221 (6%)

Query: 15  PCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
               + A   R+V++N+          +++       + +         + Q      AD
Sbjct: 242 TMAPAEAPAFRVVTYNVLHDEFCSTSAAKRRIYPFATDDILSLEYRQVRILQELLAYRAD 301

Query: 68  IVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           ++ LQE G         ++   + +   Y+ +               T   + +  V  L
Sbjct: 302 VICLQECGEKVYRQFFERILHHSGYDGRYTNKNGGVKEGCACFWK-RTRFCMNETLVFPL 360

Query: 125 QQSYPLLGAKDSFSR----AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             +       D  +R       R A+E +  I    +       +     ++    ++ +
Sbjct: 361 NWTTLQEDHPDLVARVSLYPEFREALEKVTSIGALVLLKDLQTKEELIVGNTHLFYHANA 420

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           C +   Q   L   +     S    V+ GDFN      G  
Sbjct: 421 CHIRLLQVYMLLYKLKIFAVSQPSVVLCGDFNFTPTTGGYR 461



 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 23/89 (25%), Gaps = 2/89 (2%)

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                   F +T+     L     E        N  +  +  IDY          L    
Sbjct: 518 KRQPPFGAFRETLSAPLQLRDAYSETGQELPWTNYAMTFREVIDYIFFSPTRLSVLRTVP 577

Query: 275 F-SEILYNEDDIKSRGKRLSDHCPISIDY 302
              E   +E+      +  SDH  +  D 
Sbjct: 578 IPPESELSENVALPNKQYPSDHLALIADL 606


>gi|296165729|ref|ZP_06848244.1| endonuclease/exonuclease/phosphatase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295898902|gb|EFG78393.1| endonuclease/exonuclease/phosphatase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 356

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 91/316 (28%), Gaps = 43/316 (13%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + S    + L +WNI      +          R    Y  + +   +   D++ +QE+ 
Sbjct: 35  PSRSATDSLLLATWNIREFDSPKYG-------WRGPEPYFYIVEILSHF--DLIAVQEVR 85

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               +  +         +    + + +   S N    A    ++ V     +  L+  KD
Sbjct: 86  D--GLYPLQRLKKNLGPWWDFLVTDVTLGTSGNAERMAFVYDRRKVDFTGLAAELVIPKD 143

Query: 136 SFSRAGN----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             + A      R             + ++ +H+             +    + +  A   
Sbjct: 144 QGAEAEPQQFARSPYVASFRAGWAYLSLITVHIYYGTATPDDPRRVAEISRVANLIASNA 203

Query: 192 K------DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +       +   K       +I GDFN         D   + +     ++          
Sbjct: 204 EKLSGAPQYDAGKPPRAGNAIILGDFNIFQTQ----DKTMQALTDAGFVVPPDLTDVPGS 259

Query: 246 NANKNLRNKI-----------------PIDYF-VMDQNAYKFLIQESFSEILYNEDDIKS 287
           N +KN                        DY+  +  +A + L  +  +     +   + 
Sbjct: 260 NVDKNKHYDQIAYYKELVGMKPTGKAGVFDYYNYVYTDAQEDLYAQERNAGTPGKSFREW 319

Query: 288 RGKRLSDHCPISIDYD 303
           R  ++SDH P+ ++  
Sbjct: 320 RTYQMSDHLPMWLELS 335


>gi|145615065|ref|XP_001414248.1| hypothetical protein MGG_13020 [Magnaporthe oryzae 70-15]
 gi|145021989|gb|EDK06009.1| hypothetical protein MGG_13020 [Magnaporthe oryzae 70-15]
          Length = 697

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/363 (11%), Positives = 93/363 (25%), Gaps = 77/363 (21%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +S  +++++ SWNI     + +       +   +       + Q  +  DAD + LQE+
Sbjct: 315 VSSALERIKVFSWNILCERYATENMYGYTPSGALQWEYRRRKIYQEIEERDADFLCLQEV 374

Query: 75  GSYNAVAK----VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
            +          +   +   I +   +    S R S      AI  +     +L +    
Sbjct: 375 TTEAFREDFSPELAKLDYKGIHFPRTKAKLMSDRQSLQVDGCAIFYKNSKFILLDKQVIE 434

Query: 131 L-----------GAKDSFSRAGNRRAVEL----LVEINGKKIWVLDIHLKS-FCFLDSLE 174
                          D F+R   +  + +         G ++ V + HL       D   
Sbjct: 435 PQSIAINRADMKSQTDIFNRVMPKDNIAVLGFFESRRTGARMIVANAHLAWEGTLADVKI 494

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKES------------------------------LVP 204
              +     +++ A    +W     +                                +P
Sbjct: 495 VQTAIIMEQITKYAAKYTNWPACADKKMIRLPSSDEADTKDEVLVEPAPSQEYRNNTDIP 554

Query: 205 FVIAGDFNRK---------------INYLGN---------NDDFWKTIDPNDSLIRFPKE 240
             + GD+N                  ++             D          + +     
Sbjct: 555 LFVCGDYNSTSESGVVELLSKGRLAPDHPELAGHEYGIFTRDGIEHPFSLRSAYVHLANT 614

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPIS 299
            D     N        IDY     N  + +      ++ +             +DH  I 
Sbjct: 615 PDDLPFTNYVPDFANVIDYIWYSSNNLEVVELLGPPDLQHLKRVPGFPNYHFPADHIQIM 674

Query: 300 IDY 302
            ++
Sbjct: 675 AEF 677


>gi|126307063|ref|XP_001374687.1| PREDICTED: similar to LOC90806 protein [Monodelphis domestica]
          Length = 544

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 19/206 (9%)

Query: 23  KVRLVSWNI--NTLSEQEGV--SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  ++S+NI    L E         + SV      +  + +  K++DADI+ LQE+   +
Sbjct: 167 EFSVMSYNILSQDLLEDNSYLYRHCRKSVLIWGFRFPNILREIKHMDADILCLQEVQEDH 226

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++       +  R        AI  +     +L  +      +D   
Sbjct: 227 YRKEIKPNLESLGYHCE-----YKMRTGRKPDGCAICFKCSKFTLLSANPVEFYRRDIPL 281

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++                C  ++          +   Q   L   I+  
Sbjct: 282 LDRDNVGLVLLLQPK------FHCTASPICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 335

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P +I GDFN        
Sbjct: 336 AHQKDGTVCPIIICGDFNSVPGSPLY 361


>gi|71653816|ref|XP_815539.1| pantothenate kinase subunit [Trypanosoma cruzi strain CL Brener]
 gi|70880601|gb|EAN93688.1| pantothenate kinase subunit, putative [Trypanosoma cruzi]
          Length = 1480

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/329 (11%), Positives = 84/329 (25%), Gaps = 57/329 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQ 72
            P   + + +VR +S+N N L    G                 +  + K ++  D++  Q
Sbjct: 28  TPNMEAGSMQVRALSYNFNILPRGCGGFQN-----------ERIDNFLKCVNEYDVLLFQ 76

Query: 73  EMGSYNAV-----------AKVFPKNTWCIFYSTERLINHSKRDSNND---IHTAIAVRK 118
           E+ + + +            ++  +     F         S              + +  
Sbjct: 77  EVYAASVLPYFVQKHICFQKRLVDELKERGFTHYVISKQPSYPTIFRHNVHSDNGLIIAS 136

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLEN 175
           +       SY     K        R  +   V +    G  + +L  ++       ++  
Sbjct: 137 RFPIEQCGSYTFGCNKRGSQSVR-RGCLFAEVMVPLREGGSVPILFFNVHLRQDESTVAT 195

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-------GNNDDFWKTI 228
                 +     +     +    + S +P V+AGDFN                 +  + +
Sbjct: 196 FSQVMETRRFIDSVISNLYGENNEASKIPLVVAGDFNINGIDPHNGGKPTKIFMELMQEL 255

Query: 229 DPNDS----LIRFPKEKDSRCNANKNLRN-----------KIPIDYFVMDQNAYKFLIQE 273
            P       +I            +K                   D+F +       +   
Sbjct: 256 QPLGGGLSEVILDTHGYHPSTRPSKLFFPSQSKLNRDSLTPQRQDFFFVTPAVDVRM--- 312

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +           LSDH  +S   
Sbjct: 313 -ACIKKFIASSRSPY-VYLSDHFGVSATL 339


>gi|224088280|ref|XP_002308403.1| predicted protein [Populus trichocarpa]
 gi|222854379|gb|EEE91926.1| predicted protein [Populus trichocarpa]
          Length = 307

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 76/318 (23%), Gaps = 66/318 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++++N++           ++S         L      N    I+  Q       V  
Sbjct: 4   SLTVMTFNLH-------EDQAEDSPNSWEKRKDLCISVITNYSPMILCTQ-----QGVKT 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDS 136
                  C+    +  I+       +D H  I   K+ V +L+         P +    S
Sbjct: 52  QLDYLQQCLPGYGQFGISRKGSQDASDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSLS 111

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  A    A     ++ G +       + +    +        S  L  Q    L     
Sbjct: 112 WGAAAPCIATWATFQLKGIEPPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASL----- 166

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNL 251
                 +P V  G FN +           +      +          + + +    +   
Sbjct: 167 ---PPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDMRDTWPNARVRKNHSLIHTYH 223

Query: 252 RNKI---------------------------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
             K                             +D+ +                +    +D
Sbjct: 224 GFKGDKQGALEFFKLILRALCLCWDRQTQDLHVDWILFRGR-------SLIPVLCEVVND 276

Query: 285 IKSRGKRLSDHCPISIDY 302
                   S H PI  ++
Sbjct: 277 NIDGNYPSS-HYPIFAEF 293


>gi|167945764|ref|ZP_02532838.1| Endonuclease/exonuclease/phosphatase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 208

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 63/206 (30%), Gaps = 34/206 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVFLQEM 74
            ++RL+S+NI    +      +     +         ++   +    K  D D+V LQE+
Sbjct: 16  DRLRLLSYNIQAGVDTSSYREYVTKSWKHILPHQERQNNLDCIAGIIK--DFDLVGLQEV 73

Query: 75  GSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
            S +  +    +  +    +          R        +  V  + +      + L G 
Sbjct: 74  DSGSLRSGFIDQTEYLASQADFPYWHKQVNRRIGKLAQHSNGVLSRLMPSAIAEHQLPGL 133

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    R A+ +  + + + + +  +HL                     +Q  ++ +
Sbjct: 134 PG-------RGALLIEFQTSEQPLAICILHLALGK-------------RARMRQLAYVSE 173

Query: 194 WITQKKESLVPFVIAGDFNRKINYLG 219
            I+         V+ GDFN       
Sbjct: 174 VISHYS----HLVLMGDFNCGCGSRE 195


>gi|260940647|ref|XP_002614623.1| hypothetical protein CLUG_05401 [Clavispora lusitaniae ATCC 42720]
 gi|238851809|gb|EEQ41273.1| hypothetical protein CLUG_05401 [Clavispora lusitaniae ATCC 42720]
          Length = 452

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 77/323 (23%), Gaps = 66/323 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + V L++ N   L         K   KR       + +     + D+V LQE+      A
Sbjct: 5   KSVSLLTLNTWGL---------KYVSKRRKERLRAIAERLSRGEYDVVALQEIWVEEDWA 55

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL----GAKDSF 137
                  +             +  S       +A+  K        Y        +    
Sbjct: 56  -------YLEEACRSVYPYRRRFSSGILTGPGLALLSKLPVERTFLYRFPINGRPSAFFR 108

Query: 138 SRAGNRRAVELLVEINGK---------------KIWVLDIHLKSFCFLDSLENTYSPSCS 182
                 ++V + +                     + VL+ H+ +           +   +
Sbjct: 109 GDWFVGKSVAITLLHPRTGAASADGAAKTPAAAPLAVLNSHMHAPYAQTG----DAAYAA 164

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN----------- 231
             + QA  L   +   K +    V  GD N K   L +     +    +           
Sbjct: 165 HRACQAWDLAQLVRTLKRAGYAVVQVGDLNSKPGSLPHKLFTAEAGLMDSWEAVHGVVPP 224

Query: 232 -------DSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEIL 279
                                  N     +       +DY ++        +  +     
Sbjct: 225 DELAALPAPEQIVRGGVTCDSRLNTWRSMRAPWEACRLDYALV-DAHRVRPVSAAVR--- 280

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
           + E          SDH   S ++
Sbjct: 281 FTEPLPPPLSCSCSDHFGYSFEF 303


>gi|262197346|ref|YP_003268555.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
 gi|262080693|gb|ACY16662.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
          Length = 335

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 73/281 (25%), Gaps = 44/281 (15%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSYNAVA 81
           +SWN+  L+     +   ++     +   +        + D     E       + + + 
Sbjct: 89  LSWNLVALAPLYLGAERPHADAGAGAKLEITLFNVYIGNGDYTGAIEYLRAQSPAPDLLV 148

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            + P   W    +      +           A+AV  +   V  +   L  A        
Sbjct: 149 ILEPSPRWLEPLAA-AFPEYRMLAEERRDPYAMAVLAREPVVEARLRQLTAAPI------ 201

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A E+++     ++ VL +H  +           +   +    Q     +W+      
Sbjct: 202 --PAAEVVLRRGDSEVAVLAVHPPAPLG--------AELAAERDAQLAAAAEWV---AGQ 248

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P V+ GD N             + +  +                      +IPID  +
Sbjct: 249 TRPSVVVGDMNATYWSHPLRGLLARGLRSSQR-----GFGLQPTWPRSLWPLRIPIDQLL 303

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +                      +     SDH P+ +  
Sbjct: 304 HSRELR--------------TMGRSTGPFLGSDHRPLHVTL 330


>gi|163733281|ref|ZP_02140725.1| hypothetical protein RLO149_11485 [Roseobacter litoralis Och 149]
 gi|161393816|gb|EDQ18141.1| hypothetical protein RLO149_11485 [Roseobacter litoralis Och 149]
          Length = 414

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/356 (9%), Positives = 88/356 (24%), Gaps = 68/356 (19%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +L      +    + ++ +R+ ++  +  L  +    L ++ ++   +    +      +
Sbjct: 66  LLLAGVLTLNAACAWSETLRIATF--HTGLERKGPGLLLRDILRGEDAQIKAVASVLTTV 123

Query: 65  DADIVFLQEMG------SYNAVAKVF--PKNTWCIFYSTERLINH--------------- 101
             DIV LQ         + +A   +       +   ++T                     
Sbjct: 124 APDIVALQSFDYDLTGAALSAFTDILRTGGLDYPYQFATLPNTGMRTNLDMDGNRRRAEA 183

Query: 102 ----SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV----------- 146
                    +     AI  +   V    Q +  +  +D         A            
Sbjct: 184 RDAQGYGFFSGQGGMAILSKYPIVIDEVQDFSAVLWRDFPGALLPETAAGPFPSEQAQAI 243

Query: 147 ---------ELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                     + V++ G  ++ ++ +H     F    +     +   +     +L     
Sbjct: 244 QRLSTTGHWVVPVDVPGPGRVTLMTLHASPPVFDGPEDRNGKRNHDEIVFWQSYLDGV-- 301

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP-------KEKDSRCNANK 249
                   FV+ G FN+            + +  +  L           +      +   
Sbjct: 302 FGPAPDSQFVVLGAFNQDPVAGEGLKKAMRGLISDPRLQDVEPTSPGSVEATGDPFDTAD 361

Query: 250 NLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   + +DY     +              +         +  S H  + +D 
Sbjct: 362 WDDPVPGNMRVDYVFPSSDWRVQAAGV-----YWPSGPEGVVAQTASSHRLVWVDL 412


>gi|124010467|ref|ZP_01695106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
           ATCC 23134]
 gi|123983445|gb|EAY23933.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
           ATCC 23134]
          Length = 314

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 74/268 (27%), Gaps = 58/268 (21%)

Query: 6   VLALVFFLVPCTASV-------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           VL  V+FL P   +        A   +++  N++  +                  +  L 
Sbjct: 73  VLGSVWFLQPYVQTQPQKPAKLADTFKVLHLNVHGRNT----------------QHAQLV 116

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +     +AD++ L E+    A  KV  K     +        ++     +++ + IA+  
Sbjct: 117 EQLLRQEADLLALIEVNHRWA--KVLKKGLHKQY-------PYAFVYPVDNLFSGIAIFA 167

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K      Q                   V   V +   K+  +  H+ +            
Sbjct: 168 KYPLKNVQYIFNDEPPT----------VVGDVLLPQGKVHFISTHISAPIL--------Q 209

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                   Q   +   I Q +E   P V+ GDFN         D    T   +       
Sbjct: 210 GRIPRRYSQMDKIAQQIKQDQEK--PLVLLGDFNAVPWERLIRDFKQSTHMQDTRASWL- 266

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNA 266
                       L   IPIDY       
Sbjct: 267 -----PTFPTWALWMGIPIDYIFYSPPL 289


>gi|323213902|gb|EFZ98672.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
          Length = 191

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 60/206 (29%), Gaps = 37/206 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++ N +                        LR   + + ADIV LQE+   + V  
Sbjct: 9   SFKVLTINTHKGFTAFNKRF----------ILPELRDAVRTVGADIVCLQEVMGAHEVHP 58

Query: 83  V----FPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    +P  T   F +     +  + +     + H   AV  +                S
Sbjct: 59  LHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIE-----HYENRDVS 113

Query: 137 FSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              +  R  +   +      + I V+ +HL                 S    Q   L  W
Sbjct: 114 VGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLR-------------ESHRQAQLTMLAGW 160

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGN 220
           +        P ++AGDFN      G 
Sbjct: 161 VNA-LPESEPVLVAGDFNDWRQKAGP 185


>gi|224131300|ref|XP_002321050.1| predicted protein [Populus trichocarpa]
 gi|222861823|gb|EEE99365.1| predicted protein [Populus trichocarpa]
          Length = 449

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/279 (11%), Positives = 74/279 (26%), Gaps = 77/279 (27%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
           + Q  K LDADI+ LQ++ +        ++ +         ++      +          
Sbjct: 176 VLQVLKELDADILALQDVKAEEEKAMKPLSDLAAALGMNYVFAESWAPEY---------- 225

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFL 170
              A+  K      +   +    D       R  ++  +++    ++     HL      
Sbjct: 226 -GNAILSKWPIKRWKVQKIFDDTDF------RNVLKATIDVPQAGEVNFHCTHLDHL--- 275

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------RKINYLGN 220
                      +   +Q   +         S  P ++AG  N          R  + +  
Sbjct: 276 ---------DENWRMKQIDAIIQ------SSDAPHILAGGLNSLDETDYSEERWTDIVKY 320

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANK-----------------NLRNKIPIDYFVMD 263
            ++  K     + +     +  +                         +    +DY +  
Sbjct: 321 YEEMGKPTPKVEVMSFMKSKHYTDAKDYAGECEAVVILAKGQNVQGTCKYGTRVDYILAS 380

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            N+    +  S+S                SDH  + +D 
Sbjct: 381 PNSPYKFVPGSYSVFSSKGT---------SDHHIVKVDI 410


>gi|125842765|ref|XP_698034.2| PREDICTED: protein angel homolog 1-like [Danio rerio]
          Length = 667

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 60/220 (27%), Gaps = 16/220 (7%)

Query: 23  KVRLVSWNI---NTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI   + L       +       R  +    + +  +    DIV LQE+    
Sbjct: 259 DFSVMSYNILAQDLLEANPHLYTHCAEDALRWENRLQAVLKELQIWQPDIVCLQEVQ--- 315

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                F +    +  +      + +R  +     A+  R +    L  S       +   
Sbjct: 316 --EDHFQEQMHPVLINMGYTCIYKRRTGSKTDGCAVLYRGERFTQLSVSLLEFRRSECEL 373

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++              +   L           + L+     +   + + 
Sbjct: 374 LDRDNVGIVLLLQPTAGPHHQFTPVCVANTHLLFNPRRGDVKLAQLAIMFAEIHSVMQKC 433

Query: 199 KESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
           +        ++ GDFN            W  I   +    
Sbjct: 434 RSEGKSCELILCGDFNAVP-----RSPLWTLITTGELYYH 468


>gi|330836714|ref|YP_004411355.1| exodeoxyribonuclease III Xth [Spirochaeta coccoides DSM 17374]
 gi|329748617|gb|AEC01973.1| exodeoxyribonuclease III Xth [Spirochaeta coccoides DSM 17374]
          Length = 252

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 75/303 (24%), Gaps = 78/303 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + VSWN+N +    G                    Y  + DADI  LQE         + 
Sbjct: 3   KFVSWNVNGIRSCLGKGF---------------LDYFFSTDADIFCLQETKLQEGQHDI- 46

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +  +++  +   +S         TA+  ++K VRV     P +   +         
Sbjct: 47  ELPDYHQYWNYAQKKGYSG--------TALFSKEKPVRVTFGIAPFIEDAEGR------- 91

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               ++       +++ ++  +        +               L+           P
Sbjct: 92  ----VITAEYPAYFLVCVYTPNSQRELLRLDYRMKWDDAFRAYILSLEAM--------KP 139

Query: 205 FVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             + GD N     +                   D +           F        +   
Sbjct: 140 VFVCGDLNVAHKEIDLKNPKSNVRNAGFTQEERDKFSLFLDAGFTDSFRHLYPHVIDRYS 199

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           IDY++        +      + +             SDH P+++
Sbjct: 200 WWSYMANARAKNIGWRIDYWLTSNRYADKIHDSLIDDHIP-----------GSDHAPVAL 248

Query: 301 DYD 303
             D
Sbjct: 249 LLD 251


>gi|300772873|ref|ZP_07082742.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300759044|gb|EFK55871.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 347

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 85/300 (28%), Gaps = 51/300 (17%)

Query: 6   VLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +L L+  ++P T   A++ +++          ++ + +  ++V    ++Y    +   + 
Sbjct: 70  ILYLLKQILPFTPFSAKQVLKV-----KDNRPEQDLKIMISNVYEDNNNYEGCIRVINDT 124

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DAD+V L E               W     +             D    + +  K     
Sbjct: 125 DADMVLLLETSH-----------AWEKALRSIDKKYPYSVKEPIDNTYGMLLFSKFELRD 173

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            +   L+                 +V  NG+++ +  +H       ++  +T        
Sbjct: 174 AEVKYLVEDDIPSIHTK-------IVLQNGQEVQIYALHPTPPVPNENPRSTERD----- 221

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
               + L       ++S +P ++ GD N               +  +  L          
Sbjct: 222 ----KELLLVADMARKSRLPVIVCGDLNDVAWSYTTEL----FLKMSQLLDPRRGRFFMN 273

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    + P+D+                    +    +K      SDH PI     F
Sbjct: 274 TFHAHYPILRFPLDHIFCS--------------TDFKLVCMKRLHNYDSDHFPIFTHLQF 319


>gi|326693809|ref|ZP_08230814.1| exodeoxyribonuclease III [Leuconostoc argentinum KCTC 3773]
          Length = 272

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/304 (8%), Positives = 74/304 (24%), Gaps = 59/304 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
            +SWNI++++        ++   R    + +L++       D+  +QE  +      +  
Sbjct: 3   FISWNIDSINA-----AIEHKSARGEMTWDVLQK-IAAQQPDVFAIQE--TKLKATGLTK 54

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           K    +         +         ++   +  +   +                   R  
Sbjct: 55  KQATVLAELFPDYQIYVNASDARSGYSGTMILTRLTPLAV--TYPTIGAPGEMDLEGRI- 111

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               + +  +  +V  ++  +     +                  L        ++  P 
Sbjct: 112 ----ITLEFEDFFVSTVYTPNSGSALARLADRGAWDDAYRAYISSL--------DAQKPV 159

Query: 206 VIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD N                         + +  +           +          
Sbjct: 160 IFSGDMNVAHQEIDLKNPKTNHKSAGFTDQEREKFTALLSTGFTDTMRAQNPDTPGIYTW 219

Query: 251 L----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       +   IDY+++       + + +  +    +           DH PIS+
Sbjct: 220 WAQISKTSKINNSGWRIDYYLVSDRIADKVTETAVIDTGLRQ-----------DHAPISL 268

Query: 301 DYDF 304
              F
Sbjct: 269 KMAF 272


>gi|159469514|ref|XP_001692908.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277710|gb|EDP03477.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 264

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 77/278 (27%), Gaps = 74/278 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWN+N L              R  + +  L ++   L+AD++ +QE  +   +   
Sbjct: 3   LRIVSWNVNGLR-------------RVIAHFGSLDKFLSALEADVLCIQEHKLTRADLKR 49

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++   + W  F++  R      R  + +    I      V V         A  S  RA 
Sbjct: 50  ELALADGWESFFAFTR--GRELRALDGEGRVVITEHGALVLVNV----YGPAITSEERAE 103

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R A ++                                        + L+  +     +
Sbjct: 104 ERGAFKMTF-------------------------------------FRALQHRLDGFLAA 126

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-LRNKIPIDYF 260
               V+ GDFN             +T +P+              ++          ID  
Sbjct: 127 GRRLVVLGDFNISPAAADRAGATPRTFEPHRPDRLRDAYTCWNTSSGARVNNFGSRIDLI 186

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +         I                   + SDH P+
Sbjct: 187 LAADGTPGADIMV---------------DFQGSDHAPL 209


>gi|325104253|ref|YP_004273907.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
 gi|324973101|gb|ADY52085.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
          Length = 276

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/294 (10%), Positives = 76/294 (25%), Gaps = 44/294 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YN 78
           ++ ++++S+NI                 +      L  +   +L AD++ LQE     + 
Sbjct: 13  SRSLKILSYNIL-------------EGLKDKEKRALFVRLVDSLQADVLTLQECNHFTHE 59

Query: 79  AVAKVFPKNTWCIFYSTERLINHSK----RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              K   + ++      +               N            +      Y  +   
Sbjct: 60  TFLKFAQELSYPYAVLLKEKGYPPGIISKYPIENVQRITEGFLHGYISAEIAGYQFVNLH 119

Query: 135 DSFSRAGNRRA-VELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            +      R A +E ++    ++      ++     S    DS     +          +
Sbjct: 120 LNPFMYVKRNAEMEAVIRHLDQLPKNSKTIIMGDFNSLSPQDSSYYNPNKQKLDKLIAHE 179

Query: 190 WLKDWITQKKESLVPFVIAGDF-NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +  I         + +     N+         +  +  + +        +        
Sbjct: 180 ATRAHIQNVNNGGFDYSVISQLINKGYTDAWKYKNKSR-FEKSAPSPVVKHD-------- 230

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N + IDY  +       +    F     + D        +SDH P+ +  
Sbjct: 231 --PDNDVRIDYIWVSTPLKSKIKSV-FMIKNKHTDI-------ISDHYPLVLVL 274


>gi|254494931|ref|ZP_01052602.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
 gi|213690513|gb|EAQ42030.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
          Length = 425

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/361 (11%), Positives = 94/361 (26%), Gaps = 80/361 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K++L L              ++ + +N    +             ++      L+   
Sbjct: 3   LKKHLLVLFVCFASLLNGQTN-IKAMFYNTLNYNSDT----------QSQERTPYLKTIL 51

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            +L  DI  + E+ +  A   +F         + ++            +   I      +
Sbjct: 52  DDLQPDIFMICELKNEIASNYMFDNAILPFNANFKKAEFKPSESPATGLLQMIYYNSNKL 111

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            +        G +D                    +I V   HLK+    D+       S 
Sbjct: 112 ELEFNEVIPTGIRDINHYTF--IVKSEDDNNENVRIEVFVTHLKASRGFDN-MEKRLNSV 168

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------------KTID 229
              +++   L              + AGDFN   +                       + 
Sbjct: 169 ENFTRELDRL--------PKDSFVLFAGDFNFYTSNEPGFQKIIDENNSIQLIDPINRLC 220

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKI-------------------------PIDYFVMDQ 264
           P+          ++  ++     N+                            D+ +M +
Sbjct: 221 PSFPNDGVDYFNENNFDSTYFWNNESFADVHSQSTRNGQVNGDGSGGGMDDRFDFIMMSK 280

Query: 265 NAYKF----LIQESFSEILYNED-----------------DIKSRGKRLSDHCPISIDYD 303
           N           +S+  +  N +                 ++++     SDH PI+++ +
Sbjct: 281 NFTTSSTLSYKPDSYKTVGNNSNCYNSFVSNSTCTGEFSQNLRNALYFFSDHLPITLEME 340

Query: 304 F 304
           F
Sbjct: 341 F 341


>gi|86358845|ref|YP_470737.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CFN 42]
 gi|86282947|gb|ABC92010.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CFN 42]
          Length = 318

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 63/244 (25%), Gaps = 56/244 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
            RL+++N+             N    T      +       +AD+V L E       + +
Sbjct: 95  FRLMTFNV----------AIDNWKNST-----AIADTVIASNADVVNLLEAKPLTFHLQR 139

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F    + I               N        V  K   V +Q   +   +        
Sbjct: 140 LFKVYPYHI------------GCDNGKDSCDTLVLSKRPFVTRQVTSIGSLRKDR----- 182

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   V+  G+ + ++  HL    F D               Q + L D       S 
Sbjct: 183 --LVAASVDFGGQTVNLVSAHLTKPYFDD--------------YQMKELDDLSKALDASS 226

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V++GDFN             +               +         R  I ID+   
Sbjct: 227 GPLVLSGDFNSSSIAPSIQALLREQ-------KLKTMAPEPATWPIAAGRFGIAIDHIFA 279

Query: 263 DQNA 266
               
Sbjct: 280 RAPL 283


>gi|239983100|ref|ZP_04705624.1| hypothetical protein SalbJ_26953 [Streptomyces albus J1074]
 gi|291454932|ref|ZP_06594322.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291357881|gb|EFE84783.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 299

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/299 (10%), Positives = 75/299 (25%), Gaps = 66/299 (22%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           ++L          +    ++ +V  N+                     D     Q     
Sbjct: 63  WLLLFAPLAAGGVSGDGARLSVVQHNV----------------SDENPDPVGTAQSLAAP 106

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
             D++ ++E+    A                       +   ++  +  +A+  ++  + 
Sbjct: 107 GPDLIAVEELTEEAA---------------PSYRRALREAYPHHVAYGTVALWSRHPLLS 151

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            +   L  +    +    RR +   V      + V  +HL S         T     S  
Sbjct: 152 DEPVDLRPSGVDENW---RRGLRTTVRTPHGDVAVYVVHLPSLRITSQGMRTQRRDESAR 208

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
              A+  ++   +        ++ GD N  ++  G      +   P              
Sbjct: 209 LLGARLERERAGR-------VLVVGDLNGTLDDRGLAPVTGRMGTPQGGF---------- 251

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +         ID+ +      + +       +              SDH P+    D
Sbjct: 252 AFSWPERFPLARIDHVL-----GRSVSVVGVHTLPAT----------GSDHLPVLARVD 295


>gi|121727142|ref|ZP_01680316.1| exodeoxyribonuclease III [Vibrio cholerae V52]
 gi|153818870|ref|ZP_01971537.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457]
 gi|121630520|gb|EAX62912.1| exodeoxyribonuclease III [Vibrio cholerae V52]
 gi|126510598|gb|EAZ73192.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457]
          Length = 171

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/167 (10%), Positives = 41/167 (24%), Gaps = 37/167 (22%)

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------- 215
           +  F       +        Q  + L  ++ + + +    V+ GD N             
Sbjct: 11  NGYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEA 70

Query: 216 -----------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-------- 256
                      ++     ++ +T+     +  F +      +       +          
Sbjct: 71  NRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGL 130

Query: 257 -IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ID  +      +   +          D       + SDH PI   +
Sbjct: 131 RIDVILATPTLAETCQEAGI-------DYELRAIDKPSDHAPIWTTF 170


>gi|330466211|ref|YP_004403954.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328809182|gb|AEB43354.1| Endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 413

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/401 (9%), Positives = 93/401 (23%), Gaps = 107/401 (26%)

Query: 6   VLALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           ++A+   L     + A       VR+ ++N  +L+      L  +  +R  +    + + 
Sbjct: 15  LIAVTATLTVPAPAGAGGRHPAPVRVATFN-ASLNRDTAGGLVADLSRRDNAQAANVAEV 73

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----------- 109
            + +  D++ + E     A   +        + S  R  + + R                
Sbjct: 74  IQRVRPDVLLINEFDHDPAGRALA--LFQDNYLSVPRNGSRAIRYPYRYAAPSNTGVPSG 131

Query: 110 ----------------------IHTAIAVRKKNVRVLQQSY----------------PLL 131
                                     +AV       + +                     
Sbjct: 132 HDLNNDGTVGGPDDAYGFGLFPGQYGMAVYSAYPIDVAKVRTFQTFRWRDMPGALLPDDP 191

Query: 132 GAKDSFSRAGNRRAVELL----------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
              +           +L           + + G+ + VL  H     F    +     + 
Sbjct: 192 STPEPADWYSPAELADLRLSSKSHWDLPIRLPGRTLHVLASHPTPPVFDGPEDRNGRRNH 251

Query: 182 SLLSQQAQWL----------KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
             +   A ++                       FVIAGD N       +     + +  +
Sbjct: 252 DEIRFWADYVSPGRGGYIYDDAGRRGGLRPGAAFVIAGDLNADPYDGDSVPGAAQQLLDH 311

Query: 232 DSLIR--------------------FPKEKDSRCNANKNLRNK---IPIDYFVMDQNAYK 268
             +                           D R +           + +DY +  +    
Sbjct: 312 PRVDDRVVPASAGGPAAAQRQGGANLDHRGDPRFDTGDFADTSPGNLRVDYLLPSRGLPV 371

Query: 269 FLIQESFSE-------ILYNEDDIKSRGKRLSDHCPISIDY 302
                 +         ++ +       G   SDH  + +D 
Sbjct: 372 RAAGVFWPVPGDPLFRLVGDYSPALPGGFPTSDHRLVWLDL 412


>gi|194695010|gb|ACF81589.1| unknown [Zea mays]
          Length = 161

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 15/104 (14%)

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK----------DSRCNANKNLRNKIPIDY 259
           D  +          F   +     +  +               S     K    ++ IDY
Sbjct: 48  DCGQPGFTPAERRRFGNILFQGKLVDAYRHLHKEKDIDGGFSWSGHPIGKYRGKRMRIDY 107

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F++ +     ++           D     G   SDHCP+S++  
Sbjct: 108 FLVSEQLKDRIVSCEMHGRGIELD-----GFYGSDHCPVSLELS 146


>gi|110802553|ref|YP_697748.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens SM101]
 gi|110683054|gb|ABG86424.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens SM101]
          Length = 263

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 74/267 (27%), Gaps = 40/267 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKNTWCIFY---------STERLI 99
                L +       D++ LQE       +       ++ + +               L+
Sbjct: 18  YKIKYLAKTIVEEKYDVIALQEASQSIKASIKEGNLKEDNYGLILIEEINKLGGEKYHLV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     + +  K+  V  +S+  +      +   +R+ V+  ++IN + I  
Sbjct: 78  WDYSHIGYDIYEEGLCILTKHKIVNSESF-YISKSHCKTFWRSRKIVKATIDINNENIDF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              H+            +       + Q + L   +   KES       GDFN       
Sbjct: 137 YSCHMGW----------WHDKEESFTFQVENL---LAHAKESKNRAFFMGDFNNNAFLKN 183

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKI--PIDYFVMDQNAYKFLIQES 274
              DF K+    D+      +        N      N     ID    ++N         
Sbjct: 184 EGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRNT-------- 235

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISID 301
                          + +SDH  + I+
Sbjct: 236 -KVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|257888933|ref|ZP_05668586.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,141,733]
 gi|257824989|gb|EEV51919.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,141,733]
          Length = 273

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 68/282 (24%), Gaps = 53/282 (18%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMG--------SYNAVAKVFPKNTWCIFYST------- 95
                 L +     D +++ LQE+             + K  P                 
Sbjct: 14  EKKLQELAEKILLEDYEVIALQEINQLLESEEADPPKLTKFCPVENQVPIRKDNFAYCLV 73

Query: 96  ---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                                +      A+  K    L+     +           R+ +
Sbjct: 74  QLLKEQGKEYFWSWEMSHIGYDKYEEGNALLTKRP--LESQVLTVSESQKKEDYRTRKIL 131

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
               +I+ + I+V   H   +    S       +      + +              P  
Sbjct: 132 IGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFFETRA-------------PLF 178

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFV 261
             GDFN   +  G +      +   DS +   ++  +       +  +    K+ ID+  
Sbjct: 179 FLGDFNNPADSEGYHIVKESGLLLQDSYVIANEKGKAATVEKKIDGWEQNTEKLRIDFIF 238

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +          E      Y           +SDH    I+ D
Sbjct: 239 V---------PEGVQVKKYQRIFDGIDSPIISDHYGAEIEID 271


>gi|149689170|gb|ABR27940.1| salivary inositol polyphosphate 5-phosphatase [Triatoma infestans]
          Length = 316

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 91/334 (27%), Gaps = 53/334 (15%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RL--VSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           M  K +L+  F  V    +    +    +  V+WN          +  +      T    
Sbjct: 1   MNLKILLSFSFVSVVSIHAKDANLEPRTVYAVTWN----------AGEEEPPPSLTELLG 50

Query: 56  LLRQYAKNLDADI--VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            +  Y  +++ DI  + LQEM + N  + +  KN W          N++     ++    
Sbjct: 51  QISSY--DVNPDIVIIGLQEM-TMNPTSALLKKNKWTKEIDKVLESNNNYVKVKSESLLG 107

Query: 114 IA----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           +     V+    +   +   +        + GN+ AV +  ++N +   +++ HL +   
Sbjct: 108 MLLNVYVKVSINKNWNKKKTMTIMTGKGGKFGNKGAVIVTFQLNNQWFCIVNSHLPAHDG 167

Query: 170 LDSLENTYSPSCSLLS-----------QQAQWLKDWITQKKESLVPFVIA-------GDF 211
                                           L   +  +       ++        GD 
Sbjct: 168 KQPERIKDYKLIDAKREKFCKKPSDYIFWLGDLNFRLMDETNYNADKILGLINQNKFGDL 227

Query: 212 --NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
               ++    N    +              +        K  R     D  +      K 
Sbjct: 228 LQKDELTDSKNKGSVFTGFTEESIKFAPTFKLKKGKGEYKLERRPAWTDRVLYKSETSKK 287

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +    +  +            + SDH P+   + 
Sbjct: 288 ITPTLYKSVT---------SYKGSDHYPVQAQFS 312


>gi|313243086|emb|CBY39780.1| unnamed protein product [Oikopleura dioica]
          Length = 358

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 55/286 (19%), Positives = 91/286 (31%), Gaps = 21/286 (7%)

Query: 17  TASVAQKVRLVSWNI------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           TA  + K RL SWNI      +  S   G    K  +      +T +    K LD+D++ 
Sbjct: 39  TADDSSKFRLSSWNILAQDYADRCSHLYGHLASKKQLLNWPVRWTKISDEIKELDSDVLC 98

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ S    ++V P      F    R      +  N    + IA ++   + +      
Sbjct: 99  LQEVQSSCYESEVRP------FLERLRYKCRYLQKRNLPDGSLIAFKEGIFKKVLTKEIH 152

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           +   D          V L    +GK I V   HL                   + +    
Sbjct: 153 MWHPDKCPTGQIGLLVLLEHVKSGKMILVSTTHLVFNP------YRGDWKLKQIMEILAE 206

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + + +          V+ GD N + +         K  D +    R   ++D   ++  N
Sbjct: 207 IHEILR-NSRQKPAVVLCGDLNSQPHSSLVQFLLNKKFDLSGIRARDIAQQDYDFSSQYN 265

Query: 251 LRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              +    I    +D    +    +  S I       KSR    SD
Sbjct: 266 YYGRRHSHIGRVEVDNEFLQSTGLDKNSTIDPEVKTTKSRLPESSD 311


>gi|72389492|ref|XP_845041.1| Sphingomyelin phosphodiesterase [Trypanosoma brucei TREU927]
 gi|62176724|gb|AAX70824.1| Sphingomyelin phosphodiesterase, putative [Trypanosoma brucei]
 gi|70801575|gb|AAZ11482.1| Sphingomyelin phosphodiesterase, putative [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
          Length = 580

 Score = 59.6 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 39/225 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-LDADIVFLQEMGSYNA 79
           A ++ ++++N+  +               +      +  +A    D DI+ LQE  S + 
Sbjct: 2   AAEITVLTFNLWGIFN-------------SKHRPERMAHFASKVEDYDIILLQEQFSESD 48

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-------QQSYPLLG 132
              +       +     R   + KR       + IAV  +             Q +P   
Sbjct: 49  FDIIIQNMPEEV-----RRTRYFKRYPTAFYGSGIAVISRFPVKSGVFFTFPLQGFPEQV 103

Query: 133 AKDSFSRAGNRRAVELLVEING-----------KKIWVLDIHLKSFCFLDSLENTYSPS- 180
               +        + + V  N            + + V   HL +   + S    +    
Sbjct: 104 LHGDYYANKGAAMLCVSVPCNNDVEVSGGSVMHRDVLVYSTHLVAVYQVPSQLRDWRDEV 163

Query: 181 -CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
             ++   QA    ++I          +I GDFN ++  +      
Sbjct: 164 YLAVRLSQAISFANFIIATSNPTDHIIIGGDFNSELTSMEIRTML 208


>gi|291519280|emb|CBK74501.1| Endonuclease/Exonuclease/phosphatase family [Butyrivibrio
           fibrisolvens 16/4]
          Length = 361

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 100/323 (30%), Gaps = 49/323 (15%)

Query: 16  CTASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            TA   +K R++S N+               G   W  S     ++          L  D
Sbjct: 49  TTAQANKKYRIISANLGFGAYSDDYSFFMDGGTESWAYSKDAVKTNLNGSMDAILGLSPD 108

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            + LQE+   +  +    ++       +     +S R    +  +   +        +  
Sbjct: 109 FIALQEVDLKSTRSYKVDESKLIYDRISSSSFGNSSRTFAINYDSPFLLYPITQPHGKSY 168

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN---------TYS 178
             +         +  RR++ +  E   K I +   + K++  +D+ +           Y+
Sbjct: 169 AGIYTISSVQINSATRRSLPIE-EGMSKLIDLDRCYCKNYIDVDNGKKLVLYNVHLSAYT 227

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------RKINYLGNNDDFWK----- 226
              +    Q   L + +  +  +    + AGD N        K       D  W      
Sbjct: 228 TDPATAQNQVVMLNEDMRNEFAAGNYIIAAGDMNKDVLGDSTKYFNTSAQDQLWAKPFPV 287

Query: 227 TIDPNDSLIRFPKEKDSRCNA-------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
            +  +D  +  P +++    +              I ID F++  N              
Sbjct: 288 ELLDDDFSVVKPVDENDPVPSARNADTAYTKDSFVITIDGFIVSSNVEV----------- 336

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
             E ++ + G + SDH P+ +D+
Sbjct: 337 -TESNVVNTGFKYSDHNPVFMDF 358


>gi|302664446|ref|XP_003023853.1| DNA lyase Apn2 [Trichophyton verrucosum HKI 0517]
 gi|291187871|gb|EFE43235.1| DNA lyase Apn2 [Trichophyton verrucosum HKI 0517]
          Length = 588

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 76/307 (24%), Gaps = 72/307 (23%)

Query: 64  LDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN----------NDIH 111
           L+ADIV  QE  +   +    +   + W  ++S  R        S               
Sbjct: 5   LEADIVVFQEAKIQRKDLQDDMVLVSGWDCYFSLPRQKKGIYVFSKCAAIRAEEGVTGAL 64

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
              + R    ++      + G               + V+  G+ + +      +F  + 
Sbjct: 65  CPPSSRTPFRQLSASE-QIGGYPSIEQMEELSEVDPITVDSEGRCLIL---EFPAFVLIG 120

Query: 172 SLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNR---------------- 213
                                L+  +    +     ++AGD N                 
Sbjct: 121 VYCPADRDETRDDFRLGFFNLLEVRVRNLVKMGKRVILAGDLNTCAGPIDSAPALERIRK 180

Query: 214 ------KINYLGNNDDFWKTIDPNDSL-------------IRFPKEKDSRCNANKNLR-- 252
                 +         F + + P  S                  +   SR          
Sbjct: 181 GTETEEEYLSYPARRIFNRLVRPVGSTGDTHDTESPPVLRDLCREFHPSRTGMYTCWNQK 240

Query: 253 -------NKIPIDYFVMDQNAYKFLIQESFSE----------ILYNEDDIKSRGKRLSDH 295
                      IDY +   N   + ++ +  E          I  + +++    ++ SDH
Sbjct: 241 VNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIVCVKFGLISPSFNNLLIPNEQGSDH 300

Query: 296 CPISIDY 302
           CP+    
Sbjct: 301 CPVYASI 307


>gi|326474423|gb|EGD98432.1| sphingomyelinase [Trichophyton tonsurans CBS 112818]
 gi|326481489|gb|EGE05499.1| sphingomyelinase [Trichophyton equinum CBS 127.97]
          Length = 527

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 76/350 (21%), Gaps = 84/350 (24%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              K+ ++S+N   L       + K   +R       L     +   +IV LQE  +   
Sbjct: 10  SPHKINIISFNCWGL-----KYISKFRRERLLEIGKRLAN--ADFPPEIVGLQECWTQED 62

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAK 134
              +  +    + Y                    +A+  K        +         A 
Sbjct: 63  YNAIRNETRHILPYGKFYHSGIFGG--------GLAILSKWPIEESSMFQYPLNGRPTAF 114

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   +      + I      V  +           E   S  C   + QA  +   
Sbjct: 115 FRGDWFVGKGVAYARIRIGPGSKDVAAVFCTHLHAPYEREPNDSYIC-HRTAQAWEIAKL 173

Query: 195 ITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDPNDSLIRFPKEK----- 241
           +    E     +  GDFN                  D W+ + P  S+     +      
Sbjct: 174 MRGAAERGHLVIGLGDFNMLPLSFAHRLITAHAPVTDVWRYLRPESSIGAAIDDAEIARN 233

Query: 242 -----------------DSRCNANKN---------------------LRNKIPIDYFVMD 263
                            D   N  +                            +DY  + 
Sbjct: 234 KPIPSADFNILENGATCDGAFNTWRWSKEDQKRLAREGHISVDGSLPDPYAKRLDYIFVG 293

Query: 264 ------------QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                        ++         S  +   +   +    LSDH  +   
Sbjct: 294 NGSYLNHTDDAAPSSLSSWKWNIHSARVGMMERHPTLHCSLSDHFSVEAT 343


>gi|83773202|dbj|BAE63329.1| unnamed protein product [Aspergillus oryzae]
          Length = 636

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/315 (11%), Positives = 65/315 (20%), Gaps = 73/315 (23%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSK 103
             R    +  + +  +   ADIV LQE  +   +    +     W   +S       +S 
Sbjct: 30  PWRGKRTFEAMFEILE---ADIVVLQETKIQRKDLRDDMVLVPGWDCHFSLPRSKKGYSG 86

Query: 104 RDSNNDIHTAIAVR----------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
                   T   +R            N  V  +  PL      +        +EL     
Sbjct: 87  VVIYTRNATCAPLRAEEGLTGVLCPPNSSVPFRDLPLDRQIGGYPTTEQLSTLELDAATL 146

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDF 211
             +   + +   +F  L                      +   I           + GD 
Sbjct: 147 DSEGRCVILEFPAFVLLGLYCPANRDESRDSFRQGFLDLMDARIRNLVAMGKRVFVTGDL 206

Query: 212 NRKIN----------------------YLGNNDDFWKTI-------------DPNDSLIR 236
           N                                 F + +             +       
Sbjct: 207 NISRGEIDAAHASEAIRKGTTTEDEFISAPARRLFNQLVYSGKVIGERDEGREQPALFDI 266

Query: 237 FPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                 +R                     IDY +   N   +  +               
Sbjct: 267 CRSFHPNRRGMYTCWEQKINARPGNYGSRIDYVLCSLNMQDWFCESDIQ----------- 315

Query: 288 RGKRLSDHCPISIDY 302
            G   SDHCP+   +
Sbjct: 316 EGLMGSDHCPVYAIF 330


>gi|113971778|ref|YP_735571.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4]
 gi|113886462|gb|ABI40514.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4]
          Length = 301

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 89/310 (28%), Gaps = 46/310 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R   WN+  LS     +  K +        T +    ++   D + L E+ S +   + 
Sbjct: 6   LRFGWWNV-ALSPSAPQAKSKANATTYPIICTHIETLLQDNSCDFLALCEVSSEDI--RY 62

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F +N      S   L +             +AV  K  ++       L    + +     
Sbjct: 63  FSENIKLEHISILNLTDKIG-----KTRFDLAVIYKTSKIKVNHINSLSKILTDNTVKAS 117

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           + VE+    + +KI++   H  S    +S               A  + +  +   ES  
Sbjct: 118 QLVEVENIDDSRKIYIYLCHWPSRLNGNSE--------EKRIAAANIVYNSASTLIESGK 169

Query: 204 PFVIAGDFNRKI---------------------NYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             +I GDFN                              + FW++I   +          
Sbjct: 170 DVIIMGDFNDNPYDISLYKCLKASRCHDAVKKYPSEYFYNPFWRSIVSENKYSHSGITNT 229

Query: 243 SRCNANKNLRN----KIPIDYFVMDQNAYKFLIQE--SFSEILYNEDDIKSRGKRLS--- 293
            R  + K  +         D  ++  +           F   +   + I    +  S   
Sbjct: 230 YRSGSYKYKQFMGEIWHSYDQIIVSGSFINNTYWHLNEFRTQVITPEVILKNYEDNSHFI 289

Query: 294 DHCPISIDYD 303
           DH PI  +  
Sbjct: 290 DHLPIVCEIT 299


>gi|290998866|ref|XP_002682001.1| predicted protein [Naegleria gruberi]
 gi|284095627|gb|EFC49257.1| predicted protein [Naegleria gruberi]
          Length = 450

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 81/283 (28%), Gaps = 35/283 (12%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
            ++S+N+   S       +             +     ++ ADI   QEM   + + ++ 
Sbjct: 195 TVMSYNVLAQSYTSTHYNYCKPYIGFGVRTPKIVSLVDSIQADIQMYQEME-KDMLQQLT 253

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
             +   +F   E                AI + K+   + ++    L             
Sbjct: 254 KPHHHVLFKPKE----------GRKEGLAIIIDKRVWDITKEGSNKLALNHPQDMIF--- 300

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES--L 202
            V    +   K + V+  HL                  + ++QA+ L +     K     
Sbjct: 301 -VACRHKFTKKTLLVVCTHLLGDP----------KQLDIQTEQAKVLANRSDMTKLECAC 349

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-IDYFV 261
              +I GDFN            ++ ++         +          N       IDY  
Sbjct: 350 ENVIIGGDFN-----ASQESQAYQVVEQAGFKSAIKEIHGKEPTITFNTDAIHRSIDYLW 404

Query: 262 MDQN--AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +          +  +I   +++     +  SDH PI   +
Sbjct: 405 YNCSTIMPSTCTIFNQKQIEIKKEEALPNHQYGSDHIPIFAKF 447


>gi|50304665|ref|XP_452288.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641421|emb|CAH01139.1| KLLA0C02057p [Kluyveromyces lactis]
          Length = 450

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 90/319 (28%), Gaps = 65/319 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA------------KNLDADI 68
             ++R +++N   L       + +   +R T+    L                     D+
Sbjct: 12  PGRIRFLTFNTWGL-----KYIARFRKQRLTALAERLAGNLDAGNFWDQNPNDTKEQYDV 66

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--Q 126
           V LQE+              + +     R   + +  S       +A+  K         
Sbjct: 67  VALQEVWCDEDWN-------YIVERCKHRYPYYRRFKSGMISGPGLAILSKIPIESTFLY 119

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGK------KIWVLDIHLKSFCFLDSLENTYSPS 180
            +P+ G   +F R        + V +  +       + +L+ H+ +   L       +  
Sbjct: 120 RFPINGRPSAFWRGDWYVGKSISVTLLKRTSPEYPPLAILNSHMHAPYALTG----DAAY 175

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW--------------K 226
               + Q+      +   K++    V+ GD N +   L +                   +
Sbjct: 176 ECHRACQSWDFSKLVKLYKKAGYSVVVVGDLNSRPGSLPHKFLTIEAGQVDSWEQKFGVQ 235

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSE 277
            +    +L    +        +  L              +DY ++D N        +   
Sbjct: 236 DLKDIAALSPANQITYGGTTCDSTLNTWRASRGAHEACRLDYALIDSN-----TLHTLDA 290

Query: 278 ILYNEDDIKSRGKRLSDHC 296
            +   + I + G   SDH 
Sbjct: 291 KVTFTETIPNIGS-FSDHF 308


>gi|313891165|ref|ZP_07824784.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120528|gb|EFR43648.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 275

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 78/280 (27%), Gaps = 54/280 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF------------------- 92
                L ++      D++ LQE+            + +                      
Sbjct: 19  KKLFDLAEHILAEKYDVICLQEVNQLIESDLATEDSFYQKIPGTPPLHKDNFALLLTNYL 78

Query: 93  ---YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +     +A+  K   ++     L+ A D       RR +   
Sbjct: 79  AKRGQPYYWSWAYNHIGYDIYKEGVAILSKQPMLV--EGILVTAIDDEYDFHTRRVLLAK 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            EI+G+++ +  +HL  F      E +                      + S +P V+ G
Sbjct: 137 TEIDGREVALASVHLSWFGKGFEEEWSLLE----------------QSLQNSDLPLVVMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFP-----KEKDSRCNANKNLRNKIPIDYFVMDQ 264
           DFN   +  G N     ++   DS              S  +  +  ++   +D+  M Q
Sbjct: 181 DFNNPTDSKGYNLILRSSLGLRDSHKVAEIVFGNHSIVSDIDGWEGNKDSFKVDHAFMTQ 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     F+               +SDH  +S++  +
Sbjct: 241 E---------FNISRSEITFEGGDAPVVSDHYGLSVETSW 271


>gi|294630427|ref|ZP_06708987.1| integral membrane protein [Streptomyces sp. e14]
 gi|292833760|gb|EFF92109.1| integral membrane protein [Streptomyces sp. e14]
          Length = 331

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 73/281 (25%), Gaps = 65/281 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +VR+++ N+                         L +  +     +VF+QE         
Sbjct: 110 EVRVLTANVEFGRGAP-----------------ALVEVIRRERPGLVFVQECDG------ 146

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                         R     +          +A       V+  +Y L G        G 
Sbjct: 147 ------------GCRARLRREVGDAYPYRREVAAAGSKGSVILSAYALKGTPGVAGTMGM 194

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             AV    ++ G  + +  +          +   +     L +  A           +  
Sbjct: 195 PGAVA---DVRGHTVRL-QLAHPMPPLPRQVALWHRELGRLRTFAAA----------DPA 240

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+AGDFN   ++ G        +     L    +           L     ID+ ++
Sbjct: 241 TPTVLAGDFNASQDHAGFRRILDTGLYDAARLAGADRTPIWPARTAPTLG--AQIDHVLV 298

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++              +  D  +      SDH  + ++  
Sbjct: 299 TRH--------------FTADHARFLKVPGSDHRALLVELT 325


>gi|297621732|ref|YP_003709869.1| hypothetical protein wcw_1514 [Waddlia chondrophila WSU 86-1044]
 gi|297377033|gb|ADI38863.1| hypothetical protein wcw_1514 [Waddlia chondrophila WSU 86-1044]
          Length = 272

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 84/283 (29%), Gaps = 35/283 (12%)

Query: 27  VSWNIN------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL----DADIVFLQEMGS 76
           VSWNI        L  +     W+N           L++  K +      DI FLQE+G 
Sbjct: 9   VSWNIGCVADFIGLYRRAKQQPWENLSSVPGLRMEKLKEVFKRIADDKKPDIFFLQEVGE 68

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                       + I +  +  +      + N       +  +    L + + ++   D 
Sbjct: 69  EVHAGLKKWLENYAIHFDGDDTL-----VAWNKERFTEILGSRQSEQLCKRFSIVDLMDK 123

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            ++   R A           I +    L                   L +  + L   + 
Sbjct: 124 TAKKVVRIA----------SIHLHGYDLSQPERERCGRRVTESGDEELREIVKLL---LD 170

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             +      ++  D N   +         + ++    +  F   + +  N   + R K  
Sbjct: 171 CSERIPELIMLGMDANSTPDIHPER---LEILESERFVRDFDDNQPTAFNPTLDHR-KAK 226

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           ID+      + K  + ES + +    +   S     SDH P+ 
Sbjct: 227 IDFIYAKCISGKCNVLESSANLDLKIE---SPDTNPSDHRPLY 266


>gi|222350157|emb|CAX32461.1| neutral sphingomyelinase [Trypanosoma brucei brucei]
          Length = 580

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 39/225 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-LDADIVFLQEMGSYNA 79
           A ++ ++++N+  +               +      +  +A    D DI+ LQE  S + 
Sbjct: 2   AAEITVLTFNLWGIFN-------------SKHRAERMAHFASKVEDYDIILLQEQFSESD 48

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-------QQSYPLLG 132
              +       +     R   + KR       + IAV  +             Q +P   
Sbjct: 49  FDIIIQNMPEEV-----RRTRYFKRYPTAFYGSGIAVISRFPVKSGVFFTFPLQGFPEQV 103

Query: 133 AKDSFSRAGNRRAVELLVEING-----------KKIWVLDIHLKSFCFLDSLENTYSPS- 180
               +        + + V  N            + + V   HL +   + S    +    
Sbjct: 104 LHGDYYANKGAAMLCVSVPCNNDVEASGGSVMRRDVLVYSTHLVAVYQVPSQLRDWRDEV 163

Query: 181 -CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
             ++   QA    ++I          +I GDFN ++  +      
Sbjct: 164 YLAVRLSQAISFANFIIATSNPTDHIIIGGDFNSELTSMEIRTML 208


>gi|73975969|ref|XP_537276.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform
           1 [Canis familiaris]
          Length = 1273

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/290 (11%), Positives = 73/290 (25%), Gaps = 71/290 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRN 253
             +I GDFN          K N          T+D  D    +     +S      +   
Sbjct: 141 --LILGDFNLALSILDRSSKHNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSHGT 198

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 FSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 236


>gi|42570103|ref|NP_683491.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|215275263|sp|Q0WKY2|CCR4E_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 5;
           Short=CCR4 homolog 5
 gi|332197398|gb|AEE35519.1| carbon catabolite repressor protein 4-like 5 [Arabidopsis thaliana]
          Length = 454

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 68/226 (30%), Gaps = 15/226 (6%)

Query: 11  FFLVPCTASVAQKVRLVSWN---INTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDA 66
            F      ++A K+ LVS+N   ++  S    +           +    L+ +     +A
Sbjct: 87  VFSANNFENLADKLVLVSYNLLGVDNASNHMDLYYNVPRKHLEWSRRKHLICKEISRYNA 146

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
            I+ LQE+  ++ +  +     +   + +                 AI  ++    +L  
Sbjct: 147 SILCLQEVDRFDDLDVLLKNRGFRGVHKSRTGEASDG--------CAIFWKENLFELLDH 198

Query: 127 SYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
            +         +       +E+   E    K+ V     +     +           +  
Sbjct: 199 QHIEFDKFGMRNNVAQLCVLEMNCEEDPKSKLRVRSSDPRRLVVGNIHVLFNPKRGDIKL 258

Query: 186 QQAQWLKD--WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            Q +   +  +   ++   +P  IAGD N        +      +D
Sbjct: 259 GQVRLFLEKAYKLSQEWGNIPVAIAGDLNSTPQSAIYDFIASADLD 304



 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 20/81 (24%)

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                       R   ++        + R    +DY    +      + E+    +    
Sbjct: 369 LNSAYSGVPGTYRTRDQRGEPLATTYHSRFLGTVDYIWHTKELVPVRVLETLPADVLRRT 428

Query: 284 DIKSRGKRLSDHCPISIDYDF 304
                    SDH  I+ +  F
Sbjct: 429 GGLPSENWGSDHLAIACELGF 449


>gi|218186665|gb|EEC69092.1| hypothetical protein OsI_37986 [Oryza sativa Indica Group]
          Length = 470

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 32/113 (28%), Gaps = 5/113 (4%)

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L        +   P     +  R  N L            +           S     K 
Sbjct: 351 LYQCHNIIVDCGQPGFTLSERRRFGNILSQGKLVDAYRYLHKEKDMDCGFSWSGHPIGKY 410

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++ IDYF++ +     ++           +     G   SDHCP+S++  
Sbjct: 411 RGKRMRIDYFLVSEKLKDQIVSCDIHGRGIELE-----GFYGSDHCPVSLELS 458



 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 67/222 (30%), Gaps = 42/222 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P      +  R V+WN N+L            + R  SD+    Q+   +D D++ +QE+
Sbjct: 51  PPAPREEEPRRFVTWNANSL------------LLRMKSDWPAFCQFVSRVDPDVICVQEV 98

Query: 75  GSYNAVAKVFPKNT-----------------WCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               A +K  PKN                       S            ++  +   A+ 
Sbjct: 99  RMPAAGSKGAPKNPGQLKDDTSSSRDEKQVVLRALSSPPFKDYRVWWSLSDSKYAGTAMI 158

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            K     ++    L    S      R     ++    +   +L+ +  +     +     
Sbjct: 159 IKKKFEPKKVSFNLDRTSSKHEPDGR-----VIIAEFESFLLLNTYAPN-----NGWKEE 208

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
             S     +  + + +++ Q      P +  GD N     + 
Sbjct: 209 ENSFQRRRKWDKRMLEFVQQV---DKPLIWCGDLNVSHEEID 247


>gi|297198562|ref|ZP_06915959.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297147127|gb|EDY59508.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 355

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 73/305 (23%), Gaps = 67/305 (21%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L   L+   +     + LVS N+   +                 D            A
Sbjct: 111 LNLFGGLLGDRSHAGGDLTLVSHNVGADNP----------------DPAATAGDLVASGA 154

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ L+E+                   +       +     + +   + +  +      +
Sbjct: 155 DVLALEEITPEA---------------TGTYEKELAGTYRFHAVRGTVGLWSRLPLSDTR 199

Query: 127 SYPLLGAKDSFSRAGN-----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
              +       +          RA+   V  +   + V   HL S           +   
Sbjct: 200 RVDIAMDYGPLADTKPVDTTATRALRTTVTTDRGPLVVYVAHLASVRVTPRDGFGTAQRD 259

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
             +    + +        E     V+ GD N  ++         +      + +   ++ 
Sbjct: 260 RGVQAIGRAVA------AERNARVVLLGDLNGTLDD--------RAFSGVGAWMTSAQDA 305

Query: 242 DSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            ID  ++       +  ES   +              SDH P++
Sbjct: 306 AGDGFGFTWPAGFPLARIDQILVRG-----VRPESSWVLPAT----------GSDHLPVA 350

Query: 300 IDYDF 304
               +
Sbjct: 351 ARISW 355


>gi|302552808|ref|ZP_07305150.1| integral membrane protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302470426|gb|EFL33519.1| integral membrane protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 334

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/281 (8%), Positives = 69/281 (24%), Gaps = 65/281 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+++ N+                         L    +  + D+VF++E         
Sbjct: 114 ELRVLTSNVEFGQGTGS-----------------LVATVRREEPDVVFVEECDYACDARL 156

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               +               +R           +  +         P             
Sbjct: 157 KADLSQ----------DYPHRRAVEGGGSEGSVILSRFPLRPTAGVPGTMGMPG------ 200

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                 + +++G  + +   H        +         +L   +   L+       +  
Sbjct: 201 -----AVADVDGHPVRLQLAHPMPPLPGQT---------NLWKHELGALRH--AATTDRD 244

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +P V+AGDFN   ++          +     L    +      +          ID+ ++
Sbjct: 245 LPLVLAGDFNASQDHAVFRRILDTGLYDASRLDGADRTATWPASTAATFG--AQIDHVLV 302

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++              +  +  +      +DH  +  +  
Sbjct: 303 SED--------------FGANRTRVLDVAGTDHRAVVTNLT 329


>gi|147805879|emb|CAN78259.1| hypothetical protein VITISV_026646 [Vitis vinifera]
          Length = 433

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 80/302 (26%), Gaps = 34/302 (11%)

Query: 19  SVAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +   +VS+NI    N    ++  S    S  +      ++       + DIV LQE+
Sbjct: 84  PSQETFTVVSYNILGDRNAFKHRDLYSNVPFSYMKWDHRRRVICNEIIGWNPDIVCLQEV 143

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
             Y  +  +  K  +          ++ +R  +     A   + +  R+L+         
Sbjct: 144 DKYFDLVSIMEKEGYA--------GSYKRRTGDTVDGCATFWKAEKFRLLEGECIEFKQY 195

Query: 135 DSFSRAGNRRAVELLVEINGKKI---------WVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                       E+    +   I          VL     S   L+ +           +
Sbjct: 196 GLRDNVAQLSLFEIRFLSSRAHILSEKWGNVPVVLAGDFNSTPQLNIMLYDRRELSGQRN 255

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                + D   +   S     I  D   K  +                ++   K K S  
Sbjct: 256 CHPAQVFDVERELSSS----FILMDRFLKGCWTDEEVKVATGNADCHVVVHPLKLKSSYA 311

Query: 246 N---ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +        D  V         + ++    +          +  SDH  +  ++
Sbjct: 312 TVKSSTRTRGFNGTADGVV------PTRVLDTLPVDILRGLGGLPCREVGSDHLALVSEF 365

Query: 303 DF 304
            F
Sbjct: 366 AF 367


>gi|152977829|ref|YP_001343458.1| hypothetical protein Asuc_0143 [Actinobacillus succinogenes 130Z]
 gi|150839552|gb|ABR73523.1| Endonuclease/exonuclease/phosphatase [Actinobacillus succinogenes
           130Z]
          Length = 296

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 86/286 (30%), Gaps = 65/286 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               ++ RL+SWNI+  ++                D   L Q     D   VFLQE  + 
Sbjct: 74  PVAKREFRLLSWNIHKGADNG-----------WRRDLLNLVQ-----DKQFVFLQEATTL 117

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             + +  P+          + + H+         + +         L      + A+   
Sbjct: 118 QHIPQTLPR---------FKTMLHTLAFQFRHQQSGVLNLSD----LSAERYCINAQPEP 164

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                +    +   +  + + ++++HL +F +  +              Q + LK  + Q
Sbjct: 165 WLRLPKVMAAMQFAVENRSLLIVNVHLVNFEWKTTAY----------QYQLETLKQLVAQ 214

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
              +    V+ GDFN       N +   + +  +  L       D R  A         +
Sbjct: 215 HHGA---VVLTGDFNAW---SKNRNAQLQALIRSLGLTAVHFSPDERIKAFGYP-----L 263

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D   +                       +S   R SDH P+ + + 
Sbjct: 264 DNIFIRG---------------VTVHSAQSTALRSSDHNPVELHFS 294


>gi|323454103|gb|EGB09973.1| hypothetical protein AURANDRAFT_62465 [Aureococcus anophagefferens]
          Length = 555

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 83/351 (23%), Gaps = 79/351 (22%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F   P  A     VR+VS N+           W+ +     +    L    K    D+V 
Sbjct: 222 FCDAPPAARPKNGVRVVSLNV-----------WQPAADTWATRRAALAALLKGAAPDVVA 270

Query: 71  LQEMGSY------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           LQE+                 +           +           R  +      +AV  
Sbjct: 271 LQEVRGQGRSGGTWAAELAAELESAGYAMPHAAYVPGTGDHGIGGRAPDGWTEEGVAVLS 330

Query: 119 KNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176
           +            +      S    R A+ ++ E   G  + V+  HL            
Sbjct: 331 RLPLNDFYAETCAMPPLARSSDRNPRTALGVVAETPLGAPLRVVATHLSY-----DRLQQ 385

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW----------- 225
            S     L      L       KE+ +  V+ GD N   +Y    D              
Sbjct: 386 CSSVQERLRPWLDDLWAGYDDDKENTLGQVVVGDLNTYPDYEWPTDALTLSAPVAAAVGG 445

Query: 226 ----------------------------KTIDPNDSLIRFPKEKDSRCNANKNLRN---- 253
                                       K     D    +   + +              
Sbjct: 446 PCDEDHATREKNVAALAADVGRRAEPAPKPRAEPDFFDAWEAARGAHEAGFTFPNPETMD 505

Query: 254 --KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 D  ++       L  +    +  + +   ++G R SDH  + +D 
Sbjct: 506 LDPARPDRVLVRST---KLRADRAWVLGCD-EVPGAKGHRPSDHRVLVVDL 552


>gi|291301656|ref|YP_003512934.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290570876|gb|ADD43841.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 304

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 75/292 (25%), Gaps = 71/292 (24%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           L+P  +     +R+V+ N+   +     +                        AD+V LQ
Sbjct: 80  LLPDKSDGEGNLRVVTHNVGVSNPDPKDT----------------VATLVGSGADVVALQ 123

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+                     +     S    +N     +++  K+         +  
Sbjct: 124 EVSEEA---------------QGQYEKAMSATYPHNMQQGTVSLWSKHPITDSGPVDIGI 168

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                       A+   ++    ++     HL S     +   +     +     A+ L 
Sbjct: 169 GWTR--------AIWAKIDTGKTQVAFYVAHLASVRVSSNGFASSQRDDT-----AEALG 215

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             I Q  E L   V+ GD N  +          +++ P  + +   +             
Sbjct: 216 SAIAQ--EELDAVVLLGDLNGTMQD--------RSLAPLAAQLDSTQAAAGEGFGFTWPA 265

Query: 253 --NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID  +        +   S   +              SDH P + D 
Sbjct: 266 EFPMARIDQILTRG-----VTPVSSWTLRAT----------GSDHLPAAADL 302


>gi|294932897|ref|XP_002780496.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983]
 gi|239890430|gb|EER12291.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983]
          Length = 395

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/377 (11%), Positives = 104/377 (27%), Gaps = 100/377 (26%)

Query: 1   MIRKYVLALVFFLV-----------PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           M R  +L   F  V              + V + +RL++WN ++L           +  +
Sbjct: 1   MKRNVLLTDFFKKVENPKATKIPKVTVVSRVPETIRLMAWNADSL----------LNRIK 50

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEM-------GSYNAVAKVFPKNTWC----IFYSTERL 98
                  + +  K+ D +++ + E+        S  A+ +V           + + T + 
Sbjct: 51  NKETAKEIAKVVKDHDVNVLCVCEVRMACESCSSTGAIDRVNSNQGAERDLVVNFLTRQC 110

Query: 99  INHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVEIN 153
                  S  +I  A       +      +    P      D F     R  +    +  
Sbjct: 111 GFDQLYFSLRNIKQAGVGMFMRKMPKPDRVHFKIPGTEVGGDGFHHPEGRIILA---DFA 167

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
            + + +L  ++ +  + +                   +K ++   K      +  GD N 
Sbjct: 168 SENLQLLLTYVPNNGWTEDSFAKRRRFDC-------EVKSFLANAKSQGERIIWLGDLNV 220

Query: 214 KINYLG------------------------------NNDDFWKTIDPND----------- 232
             ++                                  + F + ++              
Sbjct: 221 AASWNDVGPNPAWFRRQKQSPGLCDDDVGQPGFTQAEQNRFAELLEAGGLIDSYRQCHHE 280

Query: 233 -------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                  +    P +  +     +     + IDY ++ ++    ++  S   +   ++  
Sbjct: 281 EDWEKDATWRGAPGKPPNPPEFGRFYGKGMRIDYVLVPESMKDDIL--SVENLGIGKE-- 336

Query: 286 KSRGKRLSDHCPISIDY 302
             +G   SDH P+    
Sbjct: 337 -RKGFMGSDHAPLLAAI 352


>gi|109692744|gb|ABG38182.1| putative sphingomylinase [Chlamydomonas reinhardtii]
          Length = 530

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 78/310 (25%), Gaps = 56/310 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAV 80
           +++L+++N   L           + K          +Y +N   D DIVFLQE+ +   V
Sbjct: 3   QLKLLTFNTWGLPM---------ASKDHPLRLGRQAEYFRNEGRDLDIVFLQEVWTPEYV 53

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKD 135
             +            +  + H            + +  +                 GA +
Sbjct: 54  KLLSDA-------GADAGLTHITTFDGGVFGAGLMLMSRYPITDLAFRTFSVRGEPGALE 106

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS------------L 183
             + AG       +V  +G  + + + H  +        +   P                
Sbjct: 107 GEAMAGKGIGYARVVLPSGSAMHLFNTHTHANWVHSVKADEQLPDVKVPTDSFAPFRTAH 166

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--NNDDFWKTIDP----NDSLIRF 237
           +     ++K  +     +      AGD+N   + L           +             
Sbjct: 167 MLDAVAFMKPIVEAAAAAGELVFAAGDWNVPYDNLEACLLQSLLPCLKDSWQAAGHAPLD 226

Query: 238 PKEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           P+     C  N    +         ID+                         +      
Sbjct: 227 PEGNTCGCPTNVYTGSIIGGYVPERIDFIW---------TNAHVLSCEAVLRRMPGTELN 277

Query: 292 LSDHCPISID 301
            SDH  + + 
Sbjct: 278 YSDHHAVQVT 287


>gi|302023403|ref|ZP_07248614.1| metal-dependent hydrolase [Streptococcus suis 05HAS68]
          Length = 252

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/277 (10%), Positives = 73/277 (26%), Gaps = 45/277 (16%)

Query: 24  VRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79
           ++L++ N++  L             +R      +L +       D++ LQE+    + + 
Sbjct: 1   MKLLTINVHAWL------------EERQDEKLDVLAKTIAEKAYDVIALQEVNQLITADL 48

Query: 80  VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           V K    + + +                   +     +     IA   K        +  
Sbjct: 49  VTKDLKADNYGLILLEKLRALGQFDYSYYWSNSHIGYDKYEEGIAFLTKLPVYEVDPF-Y 107

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                S     +R+ + L V    + I +   H+      +  +     +    +     
Sbjct: 108 CSQNKSVDSILSRKIMGLTVFYQDQLIDLYSCHINLPGSEEEDQLDNVRTIVERT----- 162

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----- 245
                     +    ++ GDFN          +    +   DS     ++          
Sbjct: 163 ---------GNRRFKILMGDFNTDAFSDREAYEAITELGLYDSYNLAMEKDQGITVEKAI 213

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
           +       +  +DY  ++Q          F+      
Sbjct: 214 DGWAGHSQEKRLDYIFLNQKKEVLSSLVIFNGENRPI 250


>gi|302851688|ref|XP_002957367.1| hypothetical protein VOLCADRAFT_107631 [Volvox carteri f.
           nagariensis]
 gi|300257326|gb|EFJ41576.1| hypothetical protein VOLCADRAFT_107631 [Volvox carteri f.
           nagariensis]
          Length = 515

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/317 (10%), Positives = 77/317 (24%), Gaps = 58/317 (18%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGS 76
           ++  +++++++N   L           + K           Y +    D D+V LQE+ S
Sbjct: 2   ALTGQIKVLTFNTWGLPL---------ASKDDKLRLRNQADYFRQTGKDLDVVLLQEVWS 52

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL----G 132
              VA            +    + H        +   + V  +   +    +P       
Sbjct: 53  EEYVAL-------LADAAAAAGLAHVTTFDGGMLGAGLMVMSRFPIIDVVFHPYSVRGEP 105

Query: 133 AKDSFSRAGNRRAVELLVEINGKK----IWVLDIHLKSF---------CFLDSLENTYSP 179
                     +      V++          + + H  +          C  D    T S 
Sbjct: 106 GALQGEAMAGKGIGYARVQLPHGSGSTAAHIFNTHTHANWVHSVAIDTCLSDVKVPTDSF 165

Query: 180 SCSLLSQQAQWLKDW---ITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSL 234
           +   ++     +      +     +    +  GD+N   + L      +    +     L
Sbjct: 166 APYRVANIVDAISFMRPVVEAAMAAGELVLAGGDWNVPADSLEATLIQELLPGLRDAWQL 225

Query: 235 I-RFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                 +       + +               ID    + +                   
Sbjct: 226 AGHATLDPRGNTCGDPSNVYTGSIIGGYVPERIDLVWTNSSKVSSCETV--------LKV 277

Query: 285 IKSRGKRLSDHCPISID 301
           +       SDH  + + 
Sbjct: 278 MPGTNLNYSDHYGVLVT 294


>gi|298290711|ref|YP_003692650.1| endonuclease/exonuclease/phosphatase family protein [Starkeya
           novella DSM 506]
 gi|296927222|gb|ADH88031.1| endonuclease/exonuclease/phosphatase family protein [Starkeya
           novella DSM 506]
          Length = 380

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/333 (10%), Positives = 78/333 (23%), Gaps = 59/333 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYN 78
               + L +WNI                 R    +  L +       D+V +QE+     
Sbjct: 41  SDGSLLLATWNIRDFDSN-----KFGWGPRLPETFYYLAELISAF--DLVAIQEVNEDLE 93

Query: 79  AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV--------------- 121
              ++       W    +          +    ++    V  + V               
Sbjct: 94  PFRRLMRILGREWDYIATDVTEGASGNGERMAFVYNTEKVWFRKVAGEIVLPDGQLVVAR 153

Query: 122 -RVLQQSYPLLGAKDSFSR-AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            +V  +  P +      +R    R    +  +    +  +  +H+               
Sbjct: 154 KKVKPKDQPDIAPTIVETRQQFARSPFMVAFQSGWFRFSLCTVHIYYGDDSGDQLQRRID 213

Query: 180 SCSLLSQQAQWLKDWITQKKE---SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
               L       +D      +   +   +++ GDFN        ++      +    +  
Sbjct: 214 EIRKLVGFFAKRQDAAKPDSDQLGAPENYILLGDFNV---VSPEHETMKALKEKGFKVPA 270

Query: 237 FPKEKDSRCNANKNLR------NKIPI------------------DYFVMDQN--AYKFL 270
                  R                                     D  +   +  A    
Sbjct: 271 EIDGDKVRQKGAYFYDQIAVRVKDRRFKVAGGGMLSLFEDVFRDEDMVLYASHVPAQDPE 330

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + +F          K R  ++SDH P+ I+ +
Sbjct: 331 KKAAFRATTPEARYAKWRTWQMSDHAPLWIEIE 363


>gi|227540021|ref|ZP_03970070.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227240299|gb|EEI90314.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 347

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 84/300 (28%), Gaps = 51/300 (17%)

Query: 6   VLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +L L+  ++P T   A++ +++          ++ + +  ++V    ++Y        + 
Sbjct: 70  ILYLLKQILPFTPFSAKQVLKV-----KDNRPEQDLKIMISNVYEDNNNYDGCIGVINDT 124

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DADIV L E               W     +             D    + +  K     
Sbjct: 125 DADIVLLLETSH-----------AWEKALRSIDKKYPYSVKEPIDNTYGMLLFSKFELRD 173

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            +   L+                 +V  NG+++ +  +H       ++  +T        
Sbjct: 174 AEVKYLVEDDIPSIHTK-------IVLQNGQEVQIYALHPTPPVPNENPRSTERD----- 221

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
               + L       ++S +P ++ GD N               +  +  L          
Sbjct: 222 ----KELLLVADMARKSRLPVIVCGDLNDVAWSYTTEL----FLKMSQLLDPRRGRFFMN 273

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    + P+D+                    +    +K      SDH PI     F
Sbjct: 274 TFHAHYPILRFPLDHIFCS--------------TDFKLVCMKRLHNYDSDHFPIFTHLQF 319


>gi|295673442|ref|XP_002797267.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides
           brasiliensis Pb01]
 gi|226282639|gb|EEH38205.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides
           brasiliensis Pb01]
          Length = 521

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/344 (11%), Positives = 72/344 (20%), Gaps = 80/344 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN 78
            +K+ +++ N   L         K   K        + +     +    IV LQE  +  
Sbjct: 10  PEKISILTLNCWGL---------KFLSKYRHERLLEIGKRIAGSNNPPHIVGLQECWTQE 60

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GA 133
               +  +    + Y                    +A+  K        +         A
Sbjct: 61  DYNNIRRETQEILPYGKFYYSGIFGG--------GLAILSKWPIEESTMFAYPLNGRPTA 112

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    +      + I      + D+           E   S  C   + QA  +  
Sbjct: 113 FFRGDWFVGKGVACARIRIGPASTDIADVFCTHLHAPYEREPHDSYIC-HRTAQAWEIVK 171

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPN-------------- 231
            +    E     +  GDFN     L +          D W  + P+              
Sbjct: 172 MMRAAAEKGHLVIGLGDFNMLPQSLAHRLITSHAPVKDVWSHLHPDSSIGAAIDAAEMAR 231

Query: 232 -------DSLIRFPKEKDSRCNANKNLRNKI----------------------PIDYFVM 262
                  D  +                                           +DY  +
Sbjct: 232 KKPIPSADFNVLENGATCDGIFNTWRWNKTQQNRLKREGNIVVDGELADPLAKRLDYIFV 291

Query: 263 DQNAYKFLIQESFSEILYNE----DDIKSRGKRLSDHCPISIDY 302
              A+          I        +   +    LSDH  +    
Sbjct: 292 GDGAFGHFSSPKKWTISSARVGMMERHPTLHCSLSDHFSVEATI 335


>gi|89072797|ref|ZP_01159354.1| hypothetical protein SKA34_04820 [Photobacterium sp. SKA34]
 gi|89051319|gb|EAR56774.1| hypothetical protein SKA34_04820 [Photobacterium sp. SKA34]
          Length = 647

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 78/307 (25%), Gaps = 47/307 (15%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               + L+ +NI  + ++   +  K            + +  +N  AD+  L E      
Sbjct: 358 QKNSLTLMEFNIWGIDDRGTNAAPKYGS-------KYVAEVIENAGADVAVLTE--GRLN 408

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              V  +  W      +           +     +  R K   +   +   L  K     
Sbjct: 409 AKAVAEELGWYYVEHDD----------FSKYAPGVVSRFKIESIDTTNSRTLSLKLHDKN 458

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                ++ ++   +       D  +      +   N  +       +    + D +   K
Sbjct: 459 FNRHYSLGVIHPSSSANYNSWDAAVTQAFNNELWTNIQNEEKESKLKVLNVVVDKLFINK 518

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-------------------PKE 240
           +     +I GDFN  ++     D  ++TI                            P  
Sbjct: 519 DDKTSDLIVGDFNTVMSGEFIKDSEFETIRTYAGQKFLMSSKLMDDMDFKDSYREVHPNV 578

Query: 241 KDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           K+                   ID+ +   N       +  +   Y           +SDH
Sbjct: 579 KEIPGYTYSWFYQQDKQKGGRIDHIMYRNNKNLKYKLKPIN--SYVTHYHPVTW--VSDH 634

Query: 296 CPISIDY 302
             +   +
Sbjct: 635 SAVVTKF 641


>gi|284166543|ref|YP_003404822.1| endonuclease/exonuclease/phosphatase [Haloterrigena turkmenica DSM
           5511]
 gi|284016198|gb|ADB62149.1| Endonuclease/exonuclease/phosphatase [Haloterrigena turkmenica DSM
           5511]
          Length = 363

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 76/299 (25%), Gaps = 37/299 (12%)

Query: 39  GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           G+     +  +     + L +       DIV L E+ +                 +    
Sbjct: 62  GLPFTVAAKPQYQERASELGRRLVEEGYDIVGLCEVFNDEQETVETEYVDGAGTGTAIAG 121

Query: 99  INHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
                    +      A      +  +   + P        +  G + A  + +++   K
Sbjct: 122 PGPDGGEKGAGLLDLVAGVTVTDHATLEYDAEPSDHLTYVDAHVG-KGANYVELDLGPGK 180

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           + +   HL S   L   +       +L  QQ + L  ++ ++       ++AGDFN   +
Sbjct: 181 VDLFTTHLVSGSLLPWTDGGDEDIPALRGQQLEELGAFVAEQTSPENVTLVAGDFNIAPD 240

Query: 217 YLG-------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK------IPI 257
                            +        P  +      +  +   +               I
Sbjct: 241 GAAADALESFASTAGLYDAWLDHGSGPGGTNDDAIIDGCAFDPSGAPPAYCPGDDAGEQI 300

Query: 258 DYFV-----MDQNAYKFLIQESFSEIL--------YNEDDIKSRGKRLSDHCPISIDYD 303
           DY        D      +                 +  DD       L+DH  + +D  
Sbjct: 301 DYVFLEEPTADHEMELHVDALERRVFWRELAPPDQFYADDGGEVPNYLADH--VGLDLS 357


>gi|317143220|ref|XP_001819324.2| sphingomyelinase family protein [Aspergillus oryzae RIB40]
          Length = 431

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 77/348 (22%), Gaps = 76/348 (21%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             +    ++R+ + N   L       L K   +R +     L     +   +IV LQE  
Sbjct: 8   YPSEAPSQIRIFTLNCWGL-----KYLAKYRHERLSEIGRQLA--LADPAPEIVGLQECW 60

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL---- 131
           +      +  +    +         + K      +   +A+  K        Y       
Sbjct: 61  TQQDYESIREQTRHLL--------PYGKFYFGGVMGAGLAILSKWPIEESSMYGYPLNGR 112

Query: 132 -GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             A         +      V        V ++           E   S  C   + QA  
Sbjct: 113 PTAFFRGDWYVGKGVACARVRFGPGASDVAEVFCTHLHAPYEKEPNDSYIC-HRTAQAWE 171

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY--------LGNNDDFWKTIDP------------ 230
           +   +    E     +  GDFN   +              D W+ I P            
Sbjct: 172 IAKLMRGAAERGHLAIGLGDFNMVPSSFAHQLIRAHSPVQDVWQAIYPDSSVAAPIDPIE 231

Query: 231 ------------NDSLIRFPKEKDSRCNANKNLRNKI-------------------PIDY 259
                       N  +     +             K                     +DY
Sbjct: 232 QKRGKPTPSAEFNLHVNGATCDGKFNTWRWTKEERKRLEKGEEIAVDKDAPCPRGKRLDY 291

Query: 260 FVMD----QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +       A+        S  +       +    LSDH  +     
Sbjct: 292 IFVGDGGYPPAFPAPQWSVESVNIGMTQRHPTLRCSLSDHFAVEATIT 339


>gi|83815332|ref|YP_444975.1| endonuclease/exonuclease/phosphatase family protein [Salinibacter
           ruber DSM 13855]
 gi|83756726|gb|ABC44839.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber DSM
           13855]
          Length = 386

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 47/166 (28%), Gaps = 22/166 (13%)

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV-------- 203
            NG+ + VL  H     F          +   +   + +L      + +S          
Sbjct: 222 PNGEVLHVLASHPTPPGFDGVARRNNHRNHDEVQFWSDYLNQAAYVEDDSGRGGGLHDDA 281

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--------NKI 255
           PF++ GD N   +      +  + +  ++ +      + S                    
Sbjct: 282 PFLVMGDLNADPDDASIFRNAIRHLIGHERVDGGVVPEASPARQADYPDLDPDDTSRWGA 341

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            IDY +    A   +               +     +SDH P+ +D
Sbjct: 342 RIDYVL--PAATVAVDDAGVW----RPAPARVPDVPVSDHFPVWVD 381


>gi|149237150|ref|XP_001524452.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451987|gb|EDK46243.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 440

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/361 (10%), Positives = 81/361 (22%), Gaps = 93/361 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +RL + NI   + +      K  +KR       +        A+++ LQE+     +  
Sbjct: 86  TLRLYTNNIRFDNFRHPDPHEKPWLKRRVESIDSMHFNTGLGHANVICLQEVLHNQLLDI 145

Query: 83  VFPKNT-----------------------------------------WCIFYSTERLINH 101
           +   N                                          W  +         
Sbjct: 146 INGLNDRTGVRTESVFESDYKRESHELVEMEEEGNVKDKVKEKEKGEWTYYGVGRTDGVA 205

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           +   +     +   +  +N        P + +K  +  A  R    +  +     +   +
Sbjct: 206 AGEFAPIIFKSRDFIILENTTFWLSETPHVPSK-GWDAALERIVTLVTFQSKINPLIKFN 264

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           +    +            S  L+  + +    +         P  + GDFN +      +
Sbjct: 265 VFNTHY--DHRGHEARRKSSQLIVDKMKNYNAY---------PSFLCGDFNTEPRDEPYH 313

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQE----- 273
                    +   I                +N  P   IDY        K ++       
Sbjct: 314 ILTNAGFKDSRVTIDKQFAYGHETTFTAFDKNNEPYSIIDYIW-SPYFTKLVVSNAKEQE 372

Query: 274 -------------------------------SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                          S     +       +G   SDH P+   Y
Sbjct: 373 YSDLNPGLNNNSDKDEFFGNNFFNLDHHQYYSIVIKQFGILGNFFKGFYFSDHRPVVATY 432

Query: 303 D 303
           +
Sbjct: 433 E 433


>gi|110633268|ref|YP_673476.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1]
 gi|110284252|gb|ABG62311.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1]
          Length = 335

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 64/254 (25%), Gaps = 59/254 (23%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             +       +AD+V L+E+              W    S        ++         +
Sbjct: 121 KEVLSLIGRSNADVVTLEEVSG-----------MWRRELSFIEKAYPYRQFCPRPGVGGV 169

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSL 173
           A+  +   +   +   L          NR A+    +   G  + V+ +HL      +  
Sbjct: 170 AILSRRPFLHPSTAKCL----------NRHALAIATINFGGAAVDVVALHLGWPWPFEQ- 218

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF----WKTID 229
                      SQQ   +   +  K  S    ++AGD N                +  + 
Sbjct: 219 -----------SQQIGPVAKTLETKLGSSA--ILAGDLNAAPWSATAERLAKAGGFTRLR 265

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                       D            +PID   +                       K   
Sbjct: 266 HIGPTWLARNLPDWLRRTA-----GLPIDNIFVKGRVAVLQT--------------KRLE 306

Query: 290 KRLSDHCPISIDYD 303
              SDH P+ +++ 
Sbjct: 307 SVGSDHLPLLVEFS 320


>gi|302660169|ref|XP_003021766.1| hypothetical protein TRV_04097 [Trichophyton verrucosum HKI 0517]
 gi|291185681|gb|EFE41148.1| hypothetical protein TRV_04097 [Trichophyton verrucosum HKI 0517]
          Length = 527

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 75/350 (21%), Gaps = 84/350 (24%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              K+ ++S+N   L       + K   +R       L     +   +IV LQE  +   
Sbjct: 10  SPHKINIISFNCWGL-----KYISKFRRERLLEIGKRLAN--ADFPPEIVGLQECWTQED 62

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAK 134
              +  +    + Y                    +A+  K        +         A 
Sbjct: 63  YNAIRNETRHILPYGKFYHSGIFGG--------GLAILSKWPIEESSMFQYPLNGRPTAF 114

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   +      + I      V  +           E   S  C   + QA  +   
Sbjct: 115 FRGDWFVGKGVAYARIRIGPGSKDVAAVFCTHLHAPYEREPNDSYIC-HRTAQAWEIAKL 173

Query: 195 ITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDPNDSLIRFPKEK----- 241
           +    E     +  GDFN                  D W+ + P  S+     +      
Sbjct: 174 MRGAAERGHLVIGLGDFNMLPLSFAHRLITAHAPVTDVWRYLRPESSIGAAIDDAEIARN 233

Query: 242 -----------------DSRCNANKN---------------------LRNKIPIDYFVMD 263
                            D   N  +                            +DY  + 
Sbjct: 234 KPIPSADFNILENGATCDGAFNTWRWSKEDQKRLAREGHISVDGSLPDPYAKRLDYIFVG 293

Query: 264 QNAYKFLIQESFSEILYN------------EDDIKSRGKRLSDHCPISID 301
              Y     +       +             +   +    LSDH  +   
Sbjct: 294 NGLYLNHTDDVVPSSSSSWKWNIHSARVGMMERHPTLHCSLSDHFSVEAT 343


>gi|119175054|ref|XP_001239821.1| hypothetical protein CIMG_09442 [Coccidioides immitis RS]
          Length = 292

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 71/244 (29%), Gaps = 20/244 (8%)

Query: 68  IVFLQEMGSYNAVAKVFP----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           IV  +E+        +       + W            +   S       I   +    V
Sbjct: 54  IVCCKEVLHVQLEDVLSGLNSHGDAWAYIGVGRDDGKQAGEYSPIFYRPDIWKLETWETV 113

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                P + +K  +  A  R     +      +  VL +        D    +   S  L
Sbjct: 114 WLSETPEVPSK-GWDAASIRIVTVGVFRHRASRKTVLAMSTHL---DDQGSKSRYESAKL 169

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKE 240
           +    + +  ++ + K+ +    +AGDFN ++N        D     +D  D +    + 
Sbjct: 170 I---LRTIDGYLHKFKDRISGLFLAGDFNSEVNQEAYQVFIDQTSPLVDARDQIKPDERY 226

Query: 241 KDSRCNANK-NLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCP 297
            +            +   IDY ++     +      ++   Y    +    G   SDH  
Sbjct: 227 GNEITYTGFGYEGERETRIDYILVGPKNEQGF---PWTVKQYGVLPNKFDDGVFSSDHRA 283

Query: 298 ISID 301
           +  D
Sbjct: 284 VVAD 287


>gi|303236641|ref|ZP_07323222.1| AP endonuclease domain family protein [Prevotella disiens
           FB035-09AN]
 gi|302483145|gb|EFL46159.1| AP endonuclease domain family protein [Prevotella disiens
           FB035-09AN]
          Length = 168

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 33/121 (27%), Gaps = 19/121 (15%)

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           +  + +QQ + +  ++    +  +P ++ GDFN                        +  
Sbjct: 59  AAKIRAQQVEIVAKYVKTYLDKKIPVILCGDFNDSPISYARRTI------SEGLTDCYVA 112

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             +    +       + ID      +     +           +         SDH PI 
Sbjct: 113 SGNGPGISYHQSGMYVRIDNIFCSDDF----VPYGAKVDDKITN---------SDHYPIY 159

Query: 300 I 300
           +
Sbjct: 160 V 160


>gi|260566115|ref|ZP_05836585.1| endonuclease/exonuclease/phosphatase family protein [Brucella suis
           bv. 4 str. 40]
 gi|260155633|gb|EEW90713.1| endonuclease/exonuclease/phosphatase family protein [Brucella suis
           bv. 4 str. 40]
          Length = 212

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 67/193 (34%), Gaps = 24/193 (12%)

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117
                ADI++LQE+ +  A+        + +     R       + +  I  A+ +R   
Sbjct: 6   IAETRADILYLQEVDNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRDIT 65

Query: 118 ---KKNVRVLQQSYPLLGAKD--------------SFSRAGNRRAVELLVEINGKKIWVL 160
              +        S+  L   D                 R   R  + + + I G+ + + 
Sbjct: 66  RDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLSLF 125

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNRKIN 216
             HLKS     + ++  + S  +   +A+ ++  I +K      +   ++I GDFN    
Sbjct: 126 VAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDYRE 185

Query: 217 YLGNNDDFWKTID 229
            +    D W   +
Sbjct: 186 RILIGGDEWNGYE 198


>gi|222612819|gb|EEE50951.1| hypothetical protein OsJ_31500 [Oryza sativa Japonica Group]
          Length = 520

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 79/317 (24%), Gaps = 63/317 (19%)

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRD 105
           R       L +      ADI+ LQE+      +  +    K+ +   Y       ++   
Sbjct: 196 RFECVRQNLMREIIGYHADIICLQEVQLNHFEDFFSPELDKHGYQALYKKRTTEVYTGAP 255

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA-----GNRRAVELLVEINGKKIWVL 160
              D       R K   V +       A  S + A       R A+  L++ N   I VL
Sbjct: 256 HAIDGCATFFRRDKFSHVKKYEVEFNKAAQSLTDAIIPSTQRRVALSRLIKDNVALIAVL 315

Query: 161 DIHLKSFCFLDSLENT-----------YSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIA 208
           +    +    +  +             +     +   + Q L   + +    + +P ++ 
Sbjct: 316 EAKFGNHGTDNPGKRQLLCVANTHVNVHQDLKDVKLWEVQTLLKGLEKIAVSADIPMLVC 375

Query: 209 GDFNRKINYLGNN------------------------------------------DDFWK 226
           GDFN       +                                                
Sbjct: 376 GDFNSVPGSSPHGLLAMGKVDQLHPDLAIDPLGILRPASKLTHQLPLVSAYSSFARMVGV 435

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDI 285
             D      R     +     N        +DY     +      + E   E    +D  
Sbjct: 436 GYDLEHQRRRMDPATNEPLFTNCTRDFTGTVDYIFYTADSLSVESLLELLDEESLRKDTA 495

Query: 286 KSRGKRLSDHCPISIDY 302
               +  SDH  +  ++
Sbjct: 496 LPSPEWSSDHIALLAEF 512


>gi|332239853|ref|XP_003269109.1| PREDICTED: deoxyribonuclease-1-like 2-like [Nomascus leucogenys]
          Length = 228

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 50/182 (27%), Gaps = 18/182 (9%)

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            + S              +R    +          ++ I L +     +     +   +L
Sbjct: 58  DEVSVVDTYLYPDPEDVFSREPFVVKFSAPSSAQKLVLIPLHA-----APHQAVAEIDAL 112

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  +  W           +  GDFN   +Y+   D     +  ++       +   
Sbjct: 113 YDVYLDVIDKW------GTDDMLFLGDFNADCSYVRAQDWAAIRLRSSEVFKWLIPDSAD 166

Query: 244 RCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISI 300
               N +       D  V       + L  +S +   + E+    + + L  SDH P+ +
Sbjct: 167 TTVGNSDCAY----DRIVACGARLRRSLKPQSATVHNFQEEFGLDQTQALAISDHFPVEV 222

Query: 301 DY 302
             
Sbjct: 223 TL 224


>gi|296231420|ref|XP_002761143.1| PREDICTED: sphingomyelin phosphodiesterase 3 isoform 3 [Callithrix
           jacchus]
          Length = 638

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 75/284 (26%), Gaps = 56/284 (19%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKDQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +   Q   L+DW+   ++S                V+ GDFN                  
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFT 530

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---------LRNKIPID 258
                              T+   + L               +           N   ID
Sbjct: 531 HYRDPCRLGPGEEKPWAIGTLLDTNGLYDEDVCTPDNLQNKSSGQKGRKELLKGNGRRID 590

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y +  +       +    E  +           L+DH P+++  
Sbjct: 591 YMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVAMRL 629


>gi|227546644|ref|ZP_03976693.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|322691706|ref|YP_004221276.1| hypothetical protein BLLJ_1517 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|227212961|gb|EEI80840.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|320456562|dbj|BAJ67184.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 335

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 75/277 (27%), Gaps = 60/277 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   + +  ++   +++ LQE  +     K  
Sbjct: 115 RVMTFNVY----------------KGQADPQAIVELVRDQRVEVLALQE--TTEDFVKKL 156

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 157 NEAGIEHYLPYAQVSSSDGVFGNG---------------LWSATPLADPTDDDVNSSASF 201

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V++ G++I  + +H  +                   Q  + L +    ++ +   
Sbjct: 202 MPGGTVDMGGQQIRFVSVHTTAPVPG------------YWRQWKRSLDELGLMREHTDTR 249

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       N          ID+ V+DQ
Sbjct: 250 YIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSWPTNRAAVPMFAG-IDHVVLDQ 308

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  +    E               SDH  +   
Sbjct: 309 GMKAGQCKVVKVE--------------GSDHAALLAT 331


>gi|167562541|ref|ZP_02355457.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia oklahomensis EO147]
          Length = 171

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 46/182 (25%), Gaps = 30/182 (16%)

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            +  R A+E+ +      + V+  HL+ +            +   L ++A          
Sbjct: 1   PSMPRCALEVTLRAPLGALRVVVTHLEYYSA--EQRLAQVDALRRLHREAAAHTRASAPP 58

Query: 199 KESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
           +    PF         ++ GDFN                D    +  +            
Sbjct: 59  ETPTGPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHPDETPPMT 118

Query: 250 --------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                        +  D+  +       L +                  R SDH PI+++
Sbjct: 119 AGVYDTEQWKEGPLTCDFAFVTDTLIGRLSRCEI-----------DGAVRASDHQPIALE 167

Query: 302 YD 303
             
Sbjct: 168 LS 169


>gi|54020610|ref|YP_116105.1| membrane nuclease, lipoprotein [Mycoplasma hyopneumoniae 232]
 gi|53987783|gb|AAV27984.1| membrane nuclease A [Mycoplasma hyopneumoniae 232]
          Length = 377

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 85/319 (26%), Gaps = 50/319 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R+  WN+   S          S K  T+    + Q   +   D+V L E+      +
Sbjct: 65  NSIRIGFWNVLNYS--------NKSSKTNTAKTYAISQVINSTKLDLVGLAEITQTGDGS 116

Query: 82  KVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  +       +  + I  ++    N         +   +++   + P           
Sbjct: 117 DIVKELNTINPNAAWKEITTAEEGKVNQKEKYTFLYKSSLLKIANFASPSNPYLIQKGVK 176

Query: 141 --GNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW- 194
               R    +         +    +  H  +     +         S  SQ+A+  +D  
Sbjct: 177 LEWARPLAAVKFNTKTERKEDFTFVIGHFDAPGVQKNRGEVQDKETSQGSQEAREARDLI 236

Query: 195 -----ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                I +K       +   D N +         F  T++   SL+   ++      +N 
Sbjct: 237 NLLVEIDKKDGENKEIIFMADTNIRAENSE--KLFKSTLNSYRSLLDKEEKTSL---SNT 291

Query: 250 NLRNKIPIDYFVMDQNA----------YKFLIQESFSEILYNEDDIKSRGKR-------- 291
             +     D      +           +    +   +   Y+E   K             
Sbjct: 292 FGKYSNSYDKIFYKGDLVANKGQKFDIFSIFKKNIANVEKYDELRKKDGRSMNYKINQLG 351

Query: 292 -------LSDHCPISIDYD 303
                  +SDH  +  D +
Sbjct: 352 EINRIKGISDHTMVYFDLE 370


>gi|330912548|ref|XP_003295981.1| hypothetical protein PTT_04319 [Pyrenophora teres f. teres 0-1]
 gi|311332219|gb|EFQ95918.1| hypothetical protein PTT_04319 [Pyrenophora teres f. teres 0-1]
          Length = 468

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/354 (11%), Positives = 84/354 (23%), Gaps = 79/354 (22%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +   T+     +R++S N   L       +     +R T     +     +   DIV LQ
Sbjct: 1   MASETSQSPSSLRILSLNCWGL-----KFISTLRNERLTEIGVQIAA--ASPRPDIVGLQ 53

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPL 130
           E  +      +  K    + Y                    + +  +   +      YPL
Sbjct: 54  ECWTQQDYNVIREKTQHILPYGKFYHSGIFGG--------GLVILSRWPIIESNMVRYPL 105

Query: 131 LGAKDSFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            G   +F R      +      +++      + ++              +       + Q
Sbjct: 106 NGRPAAFYRGDWFVGKGVACARIQMGPSPRDIAEVFCTHLHAP-YEAEPHDSYICHRTAQ 164

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDP--------- 230
           A  +   +    E     +  GDFN     L +          D W+ + P         
Sbjct: 165 AWEITKLMRGAAERGHLVIGMGDFNMVPLSLAHRIIETHSPVRDVWRILHPESSIGAAKD 224

Query: 231 ---------------NDSLIRFPKEKDSRCNANKNLRNKI-------------------P 256
                          N ++     + +         + K                     
Sbjct: 225 RVEQARGVPMPSAQFNMTINGATCDSELNSWRWNKQQQKCLTKGENVQIDPAVPDPNAKR 284

Query: 257 IDYFVMDQNA-------YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +DY               +    E     +  E    +    LSDH  +     
Sbjct: 285 LDYVFFSSGRYHNPETKEETAEWELKEANVGMEMRHPTLHCSLSDHFSVEATLT 338


>gi|229184417|ref|ZP_04311624.1| hypothetical protein bcere0004_19800 [Bacillus cereus BGSC 6E1]
 gi|228599213|gb|EEK56826.1| hypothetical protein bcere0004_19800 [Bacillus cereus BGSC 6E1]
          Length = 213

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 64/200 (32%), Gaps = 28/200 (14%)

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +A   K   + +++      ++S        A+ +     G K  V ++HL        
Sbjct: 32  GLAFLSKIPIIAEEAIWETDIEESNYC-----AIRITFTYKGCKFGVTNVHLNW------ 80

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                  S  +  +Q   + +WI  +       ++ GDFN     + +     K      
Sbjct: 81  ------KSSRIRQEQMNTVNNWIENRASDYE--LLCGDFNDDPFSMVHQYLIRKHWIDVA 132

Query: 233 SLIRFPKE--KDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                 +        +  KN   K         D+ ++ +NA         +  ++ E  
Sbjct: 133 QFKEIEENMIAQPTLDYRKNPNLKDDVKQEKRYDWIMIQENAAFEF-PTIENVSIFGESA 191

Query: 285 IKSRGKRLSDHCPISIDYDF 304
           + S G   SDH  + +D  F
Sbjct: 192 LTSTGMFPSDHYGVFVDLKF 211


>gi|257900026|ref|ZP_05679679.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium Com15]
 gi|257837938|gb|EEV63012.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium Com15]
          Length = 273

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 66/282 (23%), Gaps = 53/282 (18%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
                 L +     D +++ LQE+       +  P                         
Sbjct: 14  EKKLQELAEKILLEDYEVIALQEINQLLESEEADPAKLMKFCPVENQVPIRKDNFAYCLV 73

Query: 96  ---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                                +      A+  K    L+     +           R+ +
Sbjct: 74  QLLKEQGKEYFWSWEMSHIGYDKYEEGNALLAKRP--LESQVLTVSESQKKEDYRTRKIL 131

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
               +I+ + I+V   H   +    S       +      + +              P  
Sbjct: 132 IGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFFETRA-------------PLF 178

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFV 261
             GDFN   +  G +      +   DS +    +  +       +  +    K+ ID+  
Sbjct: 179 FLGDFNNPADSEGYHIVKESGLLLQDSYVIANDKGKAATVEKKIDGWEQNTEKLRIDFIF 238

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +          E      Y           +SDH    I+ D
Sbjct: 239 V---------PEGVQVKKYQRIFDGIDSPIISDHYGAEIEID 271


>gi|332860859|ref|XP_003317535.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Pan
           troglodytes]
          Length = 466

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 86/286 (30%), Gaps = 33/286 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +         +            + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGVANQEPSNCAAV---AVGRILDELDADIVCLQETKVTRDALTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---NVRVLQQSYPLLGAKDSFS 138
            +     +  ++S  R             ++ +A   K        ++    L A  +  
Sbjct: 59  PLAIVEGYNSYFSFSRN---------RSGYSGVATFCKDNATPVAAEEGLTGLFATQNGC 109

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQ 197
            +      + ++   G  ++   +   +      +    + +   +    A  L+ +   
Sbjct: 110 HSATHMPTDRVLNHQG--LYSEHLSGSALLIHVIILGDLNTAHRPIDHWDAVNLECFEED 167

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                +  +++    +  +++G   D ++   P            +      +L     +
Sbjct: 168 PGRKWMDSLLSNLGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGAR---HLNYGSRL 224

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           DY + D+             I   +          SDHCP+     
Sbjct: 225 DYVLGDRTL----------VIDTFQASFLLPEVMGSDHCPVGAVLS 260


>gi|313236250|emb|CBY11572.1| unnamed protein product [Oikopleura dioica]
          Length = 377

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 90/302 (29%), Gaps = 49/302 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77
            AQ +   S+NI    ++           +      +L +       D+  +QE+     
Sbjct: 107 AAQTL-FGSFNIQVFGKE---------KMKKEPVKEILVKILTRY--DVFTIQEIRDASG 154

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A  ++              +        + +       R+K   +    +      +  
Sbjct: 155 EAFPELIAALNEEKDRFDFHVGERQGTTISKEQFGFGWDREKLKLIDSFDF------EDE 208

Query: 138 SRAGNRRAVELLVEINGKK--------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +    R    ++++  GK           V+  H+K    +  +      +        +
Sbjct: 209 NNLFERPPGVVVLQRTGKDAKAYPTQRFIVVSCHIKPETGVKDMTTEEEINN------LK 262

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            + +    +   +   +IAGD N  ++Y+ + +   +      S      + D+      
Sbjct: 263 LVFEMARDRHPEVKDCIIAGDMNADLHYVKDPEAL-QLYKDPKSKFLIDFDADTTAK--- 318

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFS---EILYNEDDIKSRG----KRLSDHCPISIDY 302
                   D+ V+     +  I  +     E  +   DI         ++SDH P+  ++
Sbjct: 319 --DTDAAYDHIVLYGETIQANIGCAQVFDFEEAFKTKDILYEEQSLTFQISDHYPV--EF 374

Query: 303 DF 304
            F
Sbjct: 375 SF 376


>gi|299821003|ref|ZP_07052892.1| conserved hypothetical protein [Listeria grayi DSM 20601]
 gi|299818024|gb|EFI85259.1| conserved hypothetical protein [Listeria grayi DSM 20601]
          Length = 238

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 75/247 (30%), Gaps = 36/247 (14%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           + ++       I+ LQE G  +    +       +       +    +D    I+T I  
Sbjct: 27  IFEFIVKHTPTIITLQEFGKKSFTGDIDGLELLNMLSCYGYSVVEPLKDGIKPINTRILY 86

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            K+ V      +        + R+   R    + E+NGK I +  +H   +   +     
Sbjct: 87  LKEKV------HYKKMMPPYYERSFVNRQTGGIFELNGKTICIYSLHFPLYQSQNQDNRE 140

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
              +    +         I Q        ++AGDFN                  +++L  
Sbjct: 141 DKMNMWEYTI-------RIGQNFRKYDYLILAGDFN--------ESLIGNQTALSNNLNI 185

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             K  DS  N     +N   +D+  + +           + I              SDH 
Sbjct: 186 LEKYLDSATNNIPTWKN-QKLDHIFVSKTLKHKKSDPLVNNI--------------SDHK 230

Query: 297 PISIDYD 303
            + ++++
Sbjct: 231 ALLLEFE 237


>gi|46190974|ref|ZP_00120778.2| hypothetical protein Blon03000651 [Bifidobacterium longum DJO10A]
 gi|189440783|ref|YP_001955864.1| metal-dependent hydrolase [Bifidobacterium longum DJO10A]
 gi|312134036|ref|YP_004001375.1| elsh2 [Bifidobacterium longum subsp. longum BBMN68]
 gi|189429218|gb|ACD99366.1| Metal-dependent hydrolase [Bifidobacterium longum DJO10A]
 gi|311773343|gb|ADQ02831.1| ElsH2 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 320

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 75/277 (27%), Gaps = 60/277 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   + +  ++   +++ LQE  +     K  
Sbjct: 100 RVMTFNVY----------------KGQADPQAIVELVRDQRVEVLALQE--TTEDFVKKL 141

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 142 NEAGIEHYLPYAQVSSSDGVFGNG---------------LWSATPLADPTDDDVNSSASF 186

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V++ G++I  + +H  +                   Q  + L +    ++ +   
Sbjct: 187 MPGGTVDMGGQQIRFVSVHTTAPVPG------------YWRQWKRSLDELGLMREHTDTR 234

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       N          ID+ V+DQ
Sbjct: 235 YIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSWPTNRAAVPMFAG-IDHVVLDQ 293

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  +    E               SDH  +   
Sbjct: 294 GMKAGQCKVVKVE--------------GSDHAALLAT 316


>gi|222086608|ref|YP_002545142.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium
           radiobacter K84]
 gi|221724056|gb|ACM27212.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium
           radiobacter K84]
          Length = 310

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 86/304 (28%), Gaps = 75/304 (24%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M+R+Y         P      +  +L+S+NI   + + G               T +   
Sbjct: 78  MLREYA------ASPLAPGTGKSFKLLSFNIENSNFENG---------------TRIADL 116

Query: 61  AKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               +AD+V + E     A + ++     + I  S                     V   
Sbjct: 117 IVGSNADVVEIFEAEPIKAELQRIGGAYPYRIGCSDMS------------------VECD 158

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           ++ + ++ +     +   S   NR  +   ++++G+ +  +  HL    F +        
Sbjct: 159 SLLLSKRPFQAQDMRSLGSLWRNRFIL-ATIDMDGQPVNFVSAHLSKPYFDE-------- 209

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                   A  L       K    P ++AGDFN  +      D     ++       FP+
Sbjct: 210 ------FHADELSILGPILKGIQGPLILAGDFNASVIAPDMRD----FLNDTGLSHTFPE 259

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                          I ID+                          +      S+H  + 
Sbjct: 260 PA---TWPIVAGAYGIAIDHVFAHAPLQL-------------ISVRQIPDAMGSNHFGLM 303

Query: 300 IDYD 303
            ++ 
Sbjct: 304 TEFS 307


>gi|148539973|ref|NP_001014020.2| 2',5'-phosphodiesterase 12 [Rattus norvegicus]
 gi|37361834|gb|AAQ91030.1| LRRGT00074 [Rattus norvegicus]
          Length = 705

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 81/301 (26%), Gaps = 34/301 (11%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 261 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDR 320

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 + P           R+  H    +        +  +             L  + 
Sbjct: 321 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKEL 380

Query: 136 SFSRAGNRRAVELLVEINGK-KIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQW- 190
               A N  A E +++ +   +I VL     S    C  ++    +     +   Q    
Sbjct: 381 LEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMAAA 440

Query: 191 --LKDWITQKKESLVPFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIR 236
                 ++      +P +  GDFN   +               + D      +    +  
Sbjct: 441 LVHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSVPEDHEDWASNGEEERCGMSL 500

Query: 237 FPKEK-----DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               K           N        +DY  +  +     ++++F +I   +    +   R
Sbjct: 501 THCFKLKSACGEPAYTNYVGGFHGCLDYIFI--DLNALEVEQTFQDIQITKCKDLTPAYR 558

Query: 292 L 292
            
Sbjct: 559 Y 559


>gi|294875575|ref|XP_002767386.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239868949|gb|EER00104.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 437

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 79/297 (26%), Gaps = 44/297 (14%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80
            ++++SWN++ L                      +  +  +    IV LQE+   +    
Sbjct: 150 TLKILSWNVDGLDSHSDEIDMTARTMS-------VASHIIDHRPHIVLLQELIDFNTTWF 202

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++     +  +  +   + +          +A+AV    V             +  +  
Sbjct: 203 RRLL-SKFYDFYIQSSPPLPYFVGI--LIDRSAVAVHGPLV-----------TDNFPNTK 248

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  V L       ++ +L           +   +          Q +     + +   
Sbjct: 249 MGRALVSL-----DGEVRLLSGAPVKVHIATAHLESTKSFGRARVDQLKESFSDMRRSVG 303

Query: 201 SLVP--FVIAGDFNRK----------INYLGNNDDFWKTIDPNDSLIR-FPKEKDSRCNA 247
                  +  GD N +           N     D               F  +     N 
Sbjct: 304 HSKSHLAIFGGDLNIRDDEVRQALLLPNGSKKVDIIDAWEASGRPKDSEFTWDMRINDNL 363

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFS---EILYNEDDIKSRGKRLSDHCPISID 301
               + K   D   +  +    +  + F        + D++K + +  SDH  I ++
Sbjct: 364 GIKGKPKARFDRLYLANSDTMKVSPQGFRLTGTTRCDMDEVKGKKRFPSDHFGIQLE 420


>gi|316997313|dbj|BAJ52762.1| cytolethal distending toxin B [Campylobacter lari]
 gi|316997327|dbj|BAJ52774.1| cytolethal distending toxin B [Campylobacter lari]
          Length = 268

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 83/307 (27%), Gaps = 54/307 (17%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +L +  +     A   +   + +WN+   S         +           +RQ  
Sbjct: 1   MKKILLFIFIYSFSFGAL--EDYNVGTWNLQGSSAATESKWNVS-----------IRQLI 47

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              +  D++ +QE G+  + A + P+    +              S++  ++      + 
Sbjct: 48  SGENPLDVLAVQEAGTLPSTAVMTPRQVQPVGVGIPIHEYEWNLGSSSRPNSVFIYYSRV 107

Query: 121 VR--------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
                     ++ +               +R  + + +   G  ++     L +      
Sbjct: 108 DVGANRVNMAIVSRVQADEVIVLPPPTVASRPIIGIRI---GNDVFFSIHALATGGNDAG 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
              +          Q  W+               I GDFNR              + P  
Sbjct: 165 AIVSAVDMHFRNMPQVNWM---------------IMGDFNRAPGD----------LVPLL 199

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                 +       ++     +  IDY V    N        S   IL        R   
Sbjct: 200 DADLRSRINIVAPYSSTQTSGRRVIDYAVTGSSNQSTLYTPPSILAILAA---AGLRSFL 256

Query: 292 LSDHCPI 298
            SDH P+
Sbjct: 257 ASDHFPV 263


>gi|289675836|ref|ZP_06496726.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae FF5]
          Length = 232

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 52/169 (30%), Gaps = 32/169 (18%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C  +V        Q +++++WNI  L+                  + + +    +
Sbjct: 52  LLTASCNPAVEAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYN 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99
              + +  ++   DIV LQ +                   VA ++P +T   ++  E + 
Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQLALIKERVADLYPCSTQAFYWKAEFVP 171

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
           N     S      A   R       +   P+  A     +   + A+ +
Sbjct: 172 NPHIWGS-VGRKLATLSRFHIDSAERIQLPVPDANIISRQFQPKDALLV 219


>gi|261328400|emb|CBH11377.1| sphingomyelin phosphodiesterase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 580

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 39/225 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-LDADIVFLQEMGSYNA 79
           A ++ ++++N+  +               +      +  +A    D DI+ LQE  S + 
Sbjct: 2   AAEITVLTFNLWGIFN-------------SKHRAERMAHFASKVEDYDIILLQEQFSESD 48

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-------QQSYPLLG 132
              +       +     R   + KR       + IAV  +             Q +P   
Sbjct: 49  FDIIIQNMPEEV-----RRTRYFKRYPTAFYGSGIAVISRFPVKSGVLFTFPLQGFPEQV 103

Query: 133 AKDSFSRAGNRRAVELLVEING-----------KKIWVLDIHLKSFCFLDSLENTYSPS- 180
               +        + + V  N            + + V   HL +   + S    +    
Sbjct: 104 LHGDYYANKGAAMLCISVPCNNDVEASGGSVMRRDVLVYSTHLVAVYQVPSQLRDWRDEV 163

Query: 181 -CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
             ++   QA    ++I          +I GDFN ++  +      
Sbjct: 164 YLAVRLSQAISFANFIIATSNPTDHIIIGGDFNSELTSMEIRTML 208


>gi|190891534|ref|YP_001978076.1| hypothetical protein RHECIAT_CH0001932 [Rhizobium etli CIAT 652]
 gi|190696813|gb|ACE90898.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 253

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 60/265 (22%), Gaps = 54/265 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74
           +R++S N    S                     L  Y +  DAD++ LQE+         
Sbjct: 1   MRIISLNAWGGSLH-----------------EALIDYVRQADADVLCLQEVLRAPDCGSG 43

Query: 75  -------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-----V 116
                         +               F+           D+       +A      
Sbjct: 44  WSIYRDAGLELPQRANLFAEIGAALPGHDGFFCPTSRGMLFDGDAAIAAEFGLATFVRKS 103

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                +     +    A         R A  + V  +G    +   H+         +  
Sbjct: 104 HSVIAQATDFVHGSFSAAGWGEHPRPRNAHCIRVFSHGNASAITIAHMH-----GLRDPA 158

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                    +QA  L   + +        V+ GDFN   +        +  +        
Sbjct: 159 GKDDTPAREEQALALAGLVERVWPGNEGLVVCGDFNVLPDSS-----TFNILARLGLSDL 213

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFV 261
                      +  L+     DY +
Sbjct: 214 VTGNGLVDTRTSYYLKQGRFADYML 238


>gi|303241208|ref|ZP_07327715.1| Endonuclease/exonuclease/phosphatase [Acetivibrio cellulolyticus
           CD2]
 gi|302591219|gb|EFL60960.1| Endonuclease/exonuclease/phosphatase [Acetivibrio cellulolyticus
           CD2]
          Length = 648

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 90/306 (29%), Gaps = 39/306 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD---IVFLQEMGSYNA 79
           K+ +VS+N+      E  +    S +     +          D +   ++ ++E+   + 
Sbjct: 2   KIHIVSYNMAMGKNGEDRNKIIKSKEAALEVFENGFSNLYKQDPEGVWLICVEEINKNDG 61

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +V          ++ +   H  ++  +    +IAV      + ++    L        
Sbjct: 62  GNQVEQVKDSLEQTTSVKWYTHRNKNGVSLDGESIAVFSNYQNIGEKEKISLPGGK---W 118

Query: 140 AGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              R A+ L  EI  GKK+ ++  H          E         L      L+      
Sbjct: 119 GSYRVAMLLEFEIAAGKKLGLVSTHFIQPSEDQDPEGEKRKDSMSLI-----LERIREHF 173

Query: 199 KESLVPFVIAGDFNRKINYLG--------------NNDDFWKTIDPN------DSLIRFP 238
            ++  P +I GD N                      N+   + ++         +     
Sbjct: 174 NDANEPVIICGDLNVFDTSSSDIYNIPKDDDAIAVYNNTIGQALEAGFKKGYQPTRDDIT 233

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +   + ++    DY ++   +  F        I +   D        SDH  +
Sbjct: 234 YHAWDDPSNLPSDKSWGIFDYILVRNGSSTF---GDHEIINFKNADSIP----ASDHKGV 286

Query: 299 SIDYDF 304
            +  D+
Sbjct: 287 HLQLDY 292


>gi|269217062|ref|ZP_06160916.1| endonuclease/exonuclease/phosphatase family protein [Slackia exigua
           ATCC 700122]
 gi|269129199|gb|EEZ60284.1| endonuclease/exonuclease/phosphatase family protein [Slackia exigua
           ATCC 700122]
          Length = 372

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/332 (12%), Positives = 86/332 (25%), Gaps = 63/332 (18%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKN------------------SVKRTTSDYTLLR 58
           T S   +    ++NI   +     + + +                  S +   +      
Sbjct: 56  TLSAGTEYTATTYNIGFGAYTPDYTFFMDEGVMADGTPKKGTHGTAVSKESVEACTQGAI 115

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              + LD D    QE    +   + +  N              +   + +    A  +  
Sbjct: 116 ATTQALDPDFALFQEADVDS--TRSYHVNQVDAIKGVMPGYGSTYAANFHSAFLAYPLTD 173

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRR------AVELLVEINGKKIWVLDIHLKSF---CF 169
            +  V      LL   D+   +  RR      A         +   VL I + +      
Sbjct: 174 PHGIVNAG---LLTMTDAHVASAVRRSYPVSDAFPAKFFDLDRCFEVLRIPVDNGKELVL 230

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK--------INYLGNN 221
           ++S  + Y    ++ +QQ   L   + ++ E+    +  GD+N           +     
Sbjct: 231 INSHMSAYDEGGTVRAQQLAMLNQVLKEEYEAGNYVIAGGDWNHALCGSLEMYPSEQQVP 290

Query: 222 DDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQNAYKFLI 271
                    + +     +          C  +             ID F++  N      
Sbjct: 291 SWVATLSSEDLAEGYSVVEASNLADVPTCRGDDIPYQKGVTYTTTIDGFIVSDNVTAAAE 350

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                            G   SDH P+ + + 
Sbjct: 351 N-------------IDTGFEFSDHNPVKLTFS 369


>gi|149059820|gb|EDM10703.1| synaptojanin 1, isoform CRA_d [Rattus norvegicus]
          Length = 1274

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 90/318 (28%), Gaps = 42/318 (13%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 257 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 316

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 317 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 376

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 377 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 430

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 431 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 490

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
              +       F + K +     K        D     +        +            
Sbjct: 491 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYD---TSEKCRTPAWTDRVLWRRRKWPFD 547

Query: 286 KSRGKRLSDHCPISIDYD 303
           +S   + SDH P+    D
Sbjct: 548 RSAELKTSDHRPVVALID 565


>gi|303313137|ref|XP_003066580.1| DNA lyase Apn2, putative [Coccidioides posadasii C735 delta SOWgp]
 gi|240106242|gb|EER24435.1| DNA lyase Apn2, putative [Coccidioides posadasii C735 delta SOWgp]
          Length = 588

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 66/303 (21%), Gaps = 70/303 (23%)

Query: 67  DIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---- 120
           DI+ LQE  +   +    +     W  F+S   L  + K  S   I+T  A         
Sbjct: 10  DIIVLQELKIQRKDLRDDMVLVPGWDCFFS---LPKYKKGYSGVAIYTRNATCSPIYAEE 66

Query: 121 ----------VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
                          +  P       +         E+  E    +   + +   +F  L
Sbjct: 67  GVTGILCPPNSTSSYRELPESQQIGGYPTDEQLSTSEVSAETLDSEGRCVILEFPAFVLL 126

Query: 171 DSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------ 216
                                 L   I          V+AGD N   +            
Sbjct: 127 GVYCPANRDETRDGFRLGFLNALDHRIRNLIFLGKRVVVAGDLNISRDAIDSAHALEQIR 186

Query: 217 ---------YLGNNDDFWKTIDPNDSLIRFPK--------------EKDSRCNANKNL-- 251
                            +  +     +                      +R         
Sbjct: 187 KSRLTTDEFLSSPARIIFNRLVEGGRVSHIEGVDKKDAVLWDMCRSFFPARSGMYTCWEQ 246

Query: 252 -------RNKIPIDYFVMDQNAYKFLIQESFSE-----ILYNEDDIKSRGKRLSDHCPIS 299
                       IDY +   +   ++      E       +     ++   + SDHCP+ 
Sbjct: 247 RINARPGNFGARIDYILCSLDMKDWMSIADIQEGLMVGNNFQYALYQADSSQGSDHCPVY 306

Query: 300 IDY 302
             +
Sbjct: 307 AIF 309


>gi|269120882|ref|YP_003309059.1| deoxyribonuclease I-like protein [Sebaldella termitidis ATCC 33386]
 gi|268614760|gb|ACZ09128.1| Deoxyribonuclease I-like protein [Sebaldella termitidis ATCC 33386]
          Length = 252

 Score = 59.2 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 74/266 (27%), Gaps = 30/266 (11%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            ++FF++  +      V + S+N   L +                DY  + +       D
Sbjct: 4   IILFFILFSSLFPENTVLIASFNTLRLGKN-------------KKDYYQVSKVLSKF--D 48

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V LQE+ + N + K+   N   I           K   + +     A   +  +V  + 
Sbjct: 49  LVGLQEVMNENGL-KILKGNLEKITGKKWEYHISEKPAGSGEYKEYFAYIWQKEKVSLKE 107

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            P    ++       R    +  +        +  H              S         
Sbjct: 108 -PAGYYQEEKPSDFEREPYGVWFKAGEFDFVYVLAHSVYGKKERERILEASRYI------ 160

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              + ++  +        +IAGDFN   N  G     ++ +  +   I +    D     
Sbjct: 161 --LVYNFFRKMVPLEKDVIIAGDFNLPANNRG-----FRKLTVHPEQIEYVLNPDEDLTT 213

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQE 273
                     D F + +   K     
Sbjct: 214 LGKKSLVNSYDNFFISRKHTKEFTGR 239


>gi|332970838|gb|EGK09817.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. 1501(2011)]
          Length = 377

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 60/252 (23%), Gaps = 45/252 (17%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           +   L    +    DI+   E               W    S              D   
Sbjct: 118 NTQALVNLVQQKQPDILITLESDQK-----------WEDALSVIEPDYPYSVKVPLDNLY 166

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + +  K   +  +   LL           R         NG+ IW+  +H       ++
Sbjct: 167 GMHLYSKLELIDPEIKYLLIDDIPSIHTQVRL-------TNGEVIWLYCLHPMPPSPTEA 219

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            ++T   +          L        E+    ++AGD N            ++ I    
Sbjct: 220 DKSTTRDA---------ELLMVGRHINENNQTAILAGDLNDVAWSKTT--LMFQRIS--G 266

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L              K    +  +D+                    +   DI+      
Sbjct: 267 LLDPRIGRFFINTFHVKYPILRWALDHIFHSP--------------CFTLVDIERLPSIG 312

Query: 293 SDHCPISIDYDF 304
           SDH P+     +
Sbjct: 313 SDHFPVMTTLQY 324


>gi|322689757|ref|YP_004209491.1| hypothetical protein BLIF_1575 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320461093|dbj|BAJ71713.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 335

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 75/277 (27%), Gaps = 60/277 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   + +  ++   +++ LQE  +     K  
Sbjct: 115 RVMTFNVY----------------KGQADPQAIVELVRDQRVEVLALQE--TTEDFVKKL 156

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 157 NEAGIEHYLPYAQVSSSDGVFGNG---------------LWSATPLADPTDDDVNSSASF 201

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V++ G++I  + +H  +                   Q  + L +    ++ +   
Sbjct: 202 MPGGTVDMGGQQIRFVSVHTTAPVPG------------YWRQWKRSLDELGLMREHTDTR 249

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       N          ID+ V+DQ
Sbjct: 250 YIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSWPTNRAAVPMFAG-IDHVVLDQ 308

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  +    E               SDH  +   
Sbjct: 309 GMKAGQCKVVKVE--------------GSDHAALLAT 331


>gi|289614658|emb|CBI58561.1| unnamed protein product [Sordaria macrospora]
          Length = 789

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/365 (10%), Positives = 85/365 (23%), Gaps = 79/365 (21%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +   +++++++WNI  +  +                     + Q  ++ D D++ LQE+
Sbjct: 388 VSPSLERIKVMTWNILCDKFATTTMYGYTPTGALSWEYRKERILQEIRDRDVDMLCLQEI 447

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPL 130
            +        P+     +         +K  +  D       AI  +     +L +    
Sbjct: 448 ATDVFRDFFSPELAQNDYKGVHWPRPKAKTMNEKDAAAVDGCAIFYKGSKWILLDKQLID 507

Query: 131 L-----------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDS--- 172
                          D F+R   +  + ++        G +I V + HL     L     
Sbjct: 508 YANIAINRPDMKNQHDIFNRVMPKDNIGIVCFFESRRTGARIIVANTHLAWEPTLADVKL 567

Query: 173 ---------------LENTYSPSCSLLSQQAQWLKDWITQKKES---------------L 202
                              + P       Q        +   +                 
Sbjct: 568 VQTAILMENITKYAEKYVRWQPLKDKRGIQIPQSVSVESDIPKPEMPEPGPSQEYRSNTD 627

Query: 203 VPFVIAGDFNRKINYLGN------------------------NDDFWKTIDPNDSLIRFP 238
           +P ++ GD+N                                 D          + +   
Sbjct: 628 IPLLVCGDYNSTQESSVYELLSMGRVTPEHSDFGNHQYGNFTRDGVAHPFSMRSAYVHLN 687

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              D     N     +  IDY            +     +               +DH  
Sbjct: 688 GTPDELSFTNYVPGFQEVIDYIWYSTNTLEVVELLGPPDQNHLKRVPGFPNYHFPADHIQ 747

Query: 298 ISIDY 302
           I  ++
Sbjct: 748 IMSEF 752


>gi|149641541|ref|XP_001509976.1| PREDICTED: similar to angel homolog 2 (Drosophila) [Ornithorhynchus
           anatinus]
          Length = 523

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 23  KVRLVSWNI---NTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI   + L E     +  + S+   +  +  + +  K+L+AD++ LQE+   +
Sbjct: 144 DFSVMSYNILSQDLLEENSHLYTHCRQSLLNWSYRFPNILKEIKHLNADVLCLQEVQENH 203

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++   ++     R        AI  +     ++  +       +   
Sbjct: 204 YKKEIRPSLESLGYHCEFKM-----RTGRKPDGCAICFKFSKFALVSANPVEFYRHNIPL 258

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++   +          + C  ++          +   Q   L   I   
Sbjct: 259 LDRDNVGLVLLLQPKFQ----YTATPAALCVANTHLLYNPRRGDIKLTQLAMLLAEIASV 314

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P +I GDFN        
Sbjct: 315 AHQKDGRFCPIIICGDFNSVPGSPLY 340


>gi|291516299|emb|CBK69915.1| Metal-dependent hydrolase [Bifidobacterium longum subsp. longum F8]
          Length = 320

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 75/277 (27%), Gaps = 60/277 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   + +  ++   +++ LQE  +     K  
Sbjct: 100 RVMTFNVY----------------KGQADPQAIVELVRDQRVEVLALQE--TTEDFVKKL 141

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 142 NEAGIEHYLPYAQVSSSDGVFGNG---------------LWSATPLADPTDDDVNSSASF 186

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V++ G++I  + +H  +                   Q  + L +    ++ +   
Sbjct: 187 MPGGTVDMGGQQIRFVSVHTTAPVPG------------YWRQWKRSLDELGLMREHTDTR 234

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       N          ID+ V+DQ
Sbjct: 235 YIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSWPTNRAAVPMFAG-IDHVVLDQ 293

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  +    E               SDH  +   
Sbjct: 294 GMKAGQCKVVKVE--------------GSDHAALLAT 316


>gi|285017702|ref|YP_003375413.1| hypothetical protein XALc_0907 [Xanthomonas albilineans GPE PC73]
 gi|283472920|emb|CBA15425.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 420

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 51/407 (12%), Positives = 101/407 (24%), Gaps = 115/407 (28%)

Query: 3   RKYVLALVFFLVPCT-----------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           R +++AL+     CT           AS +  +RL ++N +  S+  G  +   S++  +
Sbjct: 16  RLFLIALILLCGACTHTTSTAMSDPAASASAHLRLATYNTSLNSDVSGGLI--ASLQGDS 73

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-- 109
           +    +    + +  D+V L E   Y+   +           + +     +   +     
Sbjct: 74  AQARKIAAVLQQVRPDLVLLNEF-DYDDAHRAADLFEQRYLAAPQPHGGSALHYAYRYLA 132

Query: 110 ------------------------------------IHTAIAVRKKNVR----------- 122
                                                   + +  +              
Sbjct: 133 PVNTGVPSGLDLDNDGHVGGEGRARGNDAWGYGLHPGQYGMLLLSRYPIDTAAVRSFRLL 192

Query: 123 -VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK------------IWVLDIHLKSFCF 169
                   L     +     +R AV   + ++ K             I  L  H     F
Sbjct: 193 KWSAMPGALRPVDPASGHFFHRDAVWTQLRLSSKSHWDVPVRTPLGVIHALVAHPTPPVF 252

Query: 170 LDSLENTYSPSCSLLSQQAQWLKD-------WITQKK------ESLVPFVIAGDFNRKI- 215
             + +   + +   L    ++L D       W+           +   FVI GD N    
Sbjct: 253 DGAEKRNAARNHDELRLWREYLDDAGTGKANWLCDDAGRCGGLATDADFVILGDLNNDPI 312

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-------------------- 255
           +  G +D     I     L   P          +    K                     
Sbjct: 313 DGDGRHDAIVALIAHPRVLQYPPPHSAGGEETTRTYAAKGIAHRGPPQQVTGDFGPKAGT 372

Query: 256 -PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +DY +  +N                 D   +     SDH  + +D
Sbjct: 373 LHLDYVLPSRNFRYLDSG----VFWPTSDQPSAAIAGGSDHHLVWVD 415


>gi|241392429|ref|XP_002409449.1| synaptojanin, putative [Ixodes scapularis]
 gi|215497492|gb|EEC06986.1| synaptojanin, putative [Ixodes scapularis]
          Length = 921

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/344 (11%), Positives = 89/344 (25%), Gaps = 50/344 (14%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
             + A+    +  T  +  +V + +WN+N       V    + +     D + +     +
Sbjct: 427 SLLRAMCVRQLEYTIPLKARVTVATWNVNGGKHFNSVVFRNHPMSDWLVDNSAVGGGCGH 486

Query: 64  LDAD-------IVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHT 112
              D        +  +E+   NA   V      +  W +        +H      +    
Sbjct: 487 HQVDKTATDIFAIGFEEIVDLNASNIVNASSANQKEWLVELQKTISRDHKYVLLTSAQLV 546

Query: 113 AI----AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
            +     +R ++   ++              AGN+  V +    +   +  +  H  +  
Sbjct: 547 GVCLFVFIRPEHAPFIRDVAVDSVKTGLGGAAGNKGGVAIRFLYHSTSLCFVCAHFAAGQ 606

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN-------- 220
              +  N      +  +         + +   S       GDFN +++   +        
Sbjct: 607 SKVAERNADYAEIARKASF------PMGRTLNSHDYVFWCGDFNYRVDLENDDVKDLVRQ 660

Query: 221 --------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID-----YF--VMDQN 265
                    D              F + + +     K        D           D+ 
Sbjct: 661 GNWAELLKYDQLRVQQQQGQVFKNFLEGEINFAPTYKYDLFSDDYDTSDKCRIPAWTDRI 720

Query: 266 AYKFLIQESFSEILY------NEDDIKSRGKRLSDHCPISIDYD 303
            ++     S +                    + SDH P+  D D
Sbjct: 721 LFRRRRLFSEAGENDPFWSPGRIAHYGRAELKTSDHRPVVADID 764


>gi|71893930|ref|YP_279376.1| membrane nuclease, lipoprotein [Mycoplasma hyopneumoniae J]
 gi|71852057|gb|AAZ44665.1| membrane nuclease, lipoprotein [Mycoplasma hyopneumoniae J]
          Length = 377

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 83/319 (26%), Gaps = 50/319 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R+  WN+   S          S K  T+    + Q   +   D+V L E+      +
Sbjct: 65  NSIRIGFWNVLNYS--------NKSSKTNTAKTYAISQVINSTKLDLVGLAEITQTGDGS 116

Query: 82  KVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  +       +  + I  ++    N         +   + +   + P           
Sbjct: 117 DIVKELNTLNPNAAWKEITTAEEGKVNQKEKYTFLYKSSLLEIANFASPSNPYLIQKGVK 176

Query: 141 --GNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW- 194
               R    +         +    +  H  +     +         S  SQ+A   +D  
Sbjct: 177 LEWARPLAAVKFNTKTERKEDFTFVIGHFDAPGVQKNRGEIQDKETSQGSQEAAEARDLI 236

Query: 195 -----ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                I +K       +   D N +         F  T++   SL+   ++      +N 
Sbjct: 237 NLLVEIDKKDGENKEIIFMADTNIRAENSE--KLFKSTLNSYRSLLDKEEKTSL---SNT 291

Query: 250 NLRNKIPIDYFVMDQNA----------YKFLIQESFSEILYNEDDIKSRGKR-------- 291
             +     D      N           +    +   +   Y+E   K             
Sbjct: 292 FGKYSNSYDKIFYKGNLVANNGQKFDIFSIFKKNIANVEKYDELRKKDGRSMNYKINQLG 351

Query: 292 -------LSDHCPISIDYD 303
                  +SDH  +  D +
Sbjct: 352 EINRIKGISDHTMVYFDLE 370


>gi|299749947|ref|XP_001836439.2| hypothetical protein CC1G_07086 [Coprinopsis cinerea okayama7#130]
 gi|298408670|gb|EAU85392.2| hypothetical protein CC1G_07086 [Coprinopsis cinerea okayama7#130]
          Length = 366

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/280 (11%), Positives = 76/280 (27%), Gaps = 25/280 (8%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              +R+++WN++  +  +  +  K +++    +    ++     D   + LQE+      
Sbjct: 93  PTTLRIITWNVD-FTTPDAKTRLKTALRHIEREVLSCKEGDLPFDPCCILLQEVHRDVFC 151

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +  +     F       +                    V  + +S  L   K    R 
Sbjct: 152 VLLEDEWVRRHFIIAPGSPDKW----PEGTAYGNVTLVSRVLTVVRSEILHYGKTYMGRT 207

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                + L       +I  + +       L           +  S Q +    ++ Q + 
Sbjct: 208 ALAVYILLSEPEPSAEIVTICVVNTHLESLSDG-------FAYRSAQMELAGMFLQQAEV 260

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN----KNLRNKIP 256
                V+AGD N        +          D+  +  +++                   
Sbjct: 261 RGG--VVAGDMNA---ISPEDHTLHMGAGLKDAWRKGNEDEGGFTWGYQEHNPTQYPPGR 315

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +D  +        +       +    ++    G  +SDH 
Sbjct: 316 LDKILYLPRRGYKMDPPERVGVGVKTEE----GTWVSDHY 351


>gi|124265282|ref|YP_001019286.1| DNA-(apurinic or apyrimidinic site) lyase [Methylibium
           petroleiphilum PM1]
 gi|124258057|gb|ABM93051.1| DNA-(apurinic or apyrimidinic site) lyase [Methylibium
           petroleiphilum PM1]
          Length = 263

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 85/306 (27%), Gaps = 73/306 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RLVS N+N +                        ++A+    D + +QE+ +  A    
Sbjct: 2   LRLVSLNLNGIRSAANKGW---------------VEWAEKSAIDCMGVQELKAQAA---- 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +     +      ++   ++ + +  +          + G  +    A  R
Sbjct: 43  ----DLGGRFDQVAGLKGHFHYADKKGYSGVGLYTRGTPSDV----ITGIGEPEFDAEGR 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             VE   +   +K+ ++  +  S    D  +       +L     + L        ++  
Sbjct: 95  Y-VEARFDTPQRKLSIISCYFPSGSSSDERQQAKFRFLALFYPYLELL--------KATR 145

Query: 204 PFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN- 246
            F++ GD N                             + +D    +      +      
Sbjct: 146 EFILVGDVNIAHREIDLKNWKSNQKNSGFLPEERAWMSRALDELGLVDVHRTLRPDDTGE 205

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           A     N+           IDY              + +           + +R SDH P
Sbjct: 206 AYTWWSNRGQAWANNVGWRIDY-----------HLATPALAALARSASVYKAQRFSDHAP 254

Query: 298 ISIDYD 303
           +++DY+
Sbjct: 255 LTVDYE 260


>gi|186474872|ref|YP_001856342.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815]
 gi|184191331|gb|ACC69296.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815]
          Length = 265

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 75/292 (25%), Gaps = 65/292 (22%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN----AVAK 82
           VSWN++      G   W             ++++ +++ AD  FLQE  +       +A 
Sbjct: 20  VSWNLHKGRSPLGFQAW-----------EAMQRWVESVHADAYFLQEAMARRMPGPVLAS 68

Query: 83  VFPKNTWCIFYSTERLINHSKRDS------------NNDIHTAIAVRKKNVRVLQQSYPL 130
            F                    DS                    A+   +   L   + +
Sbjct: 69  SFGARMGDYDNDVWHCQATEIADSLQLQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDI 128

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   R   R  +       G  + +L  HL                     +Q  W
Sbjct: 129 SA-----HRFERRGLLVARATFGGHSVSLLCAHLALT-------------RQARLRQMHW 170

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           +  WI+++  +  P V+AGDFN   N           +     L                
Sbjct: 171 IAHWISKEAPAG-PLVLAGDFNDWRNDSVP-------LFREHGLEEVATLLGEPGRTFPA 222

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +D   +        IQ +                 LSDH P     
Sbjct: 223 FSPALALDKMFVRGMKPIEWIQPA------------QETAWLSDHLPYMARL 262


>gi|89891525|ref|ZP_01203030.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteria
           bacterium BBFL7]
 gi|89516299|gb|EAS18961.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteria
           bacterium BBFL7]
          Length = 372

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/250 (11%), Positives = 57/250 (22%), Gaps = 44/250 (17%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             L    +    D++   E     +            +   +   N       + +    
Sbjct: 118 QELYNEIREQQPDLIVFTETNERWSNEIKNKIGKEYPYKIEQPQDNTYGMLVYSKLR--- 174

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
               +    +  + P + +K              ++  NGK+  +  IH        +  
Sbjct: 175 LSDSEIKFKVDPNIPSIESK--------------VMMENGKQFQLYAIHPTPPMPQHNPM 220

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
           +T            Q L        +S +P +I GDFN                     L
Sbjct: 221 STDRD---------QELILTAMSSYDSNIPVIILGDFNDVAWSDSTQLTK----TIGKLL 267

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                         +    + P+D+ ++                              SD
Sbjct: 268 DLRIGRGFFNTYHAQYPLMRWPLDHILISPEFRLKDAGTGVDFE--------------SD 313

Query: 295 HCPISIDYDF 304
           H P      F
Sbjct: 314 HFPSWAVLTF 323


>gi|78355714|ref|YP_387163.1| hypothetical protein Dde_0667 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218119|gb|ABB37468.1| hypothetical protein Dde_0667 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 338

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 82/294 (27%), Gaps = 69/294 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
               ++R++S N+                     D+  L +  +  D D+V +QE     
Sbjct: 96  PSGARIRVLSCNLR----------------VGEVDFEALSRVVREYDVDVVAVQE----- 134

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                        +    RL          D    IAV  +    + ++  L  A   + 
Sbjct: 135 -------------YIGDRRLTLPEGWQGKRDGQ--IAVYSRFPLQVGEALKLHRAGHKWK 179

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----------PSCSLLSQQ 187
           R      +  ++      +    +HL S  +                     + +   ++
Sbjct: 180 RQ---TVLPAVIRTPAGPVAFFAVHLPSPRYGLQHLLDRRKLINPEKAGMLEAQTGAREE 236

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
           A  L   +     +++P ++AGDFN           +W  +      +       +   +
Sbjct: 237 ASMLARAM--VDRAVLPVIVAGDFNL-PRESYIFRRYWSDMSDA--SVLLTGYGWTFFES 291

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            + L   + +D  +    A     +                    SDH P+  D
Sbjct: 292 LRGLPVMLAVDRVLAGNGAEARWFRVGPDVD--------------SDHRPVIAD 331


>gi|83949590|ref|ZP_00958323.1| possible endonuclease/exonuclease/phosphatase family protein
           [Roseovarius nubinhibens ISM]
 gi|83837489|gb|EAP76785.1| possible endonuclease/exonuclease/phosphatase family protein
           [Roseovarius nubinhibens ISM]
          Length = 401

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/387 (11%), Positives = 80/387 (20%), Gaps = 115/387 (29%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + S+N+  L   +       S   +        +      +DADIV  QE+    A+ 
Sbjct: 4   FTIASFNVKNLIGPDKEYYEFQSYTPEEYAWKEDWMADQLVTMDADIVGFQEIFEEEALR 63

Query: 82  KVFPKNTWCIFY------------------------------STERLINHSKRDSNNDIH 111
            V  +                                           N +         
Sbjct: 64  AVLREADARAEMLNEAVIPDRTKSYRRKVIFRKLRVDPYTGAELAFAANSADDGVAGKRR 123

Query: 112 TAIAVRKKN------VRVLQQSYP-------------LLGAKDSFSRAGNRRAVELLVEI 152
             +A+  +         +   + P                A     R  +R  ++  + +
Sbjct: 124 PGLAILSRFGFAGTPEVIQDLATPIEIPFQALRGLEGDTDAGFYRIRRLSRPILKARIPV 183

Query: 153 NGKKIWVLDIHLKSF--------------------CFLDSLENTYSPSCSLLSQQAQWLK 192
             + I V + HLKS                                 +      +A  L+
Sbjct: 184 GDRTITVFNCHLKSKLGEYLTPEGADYAPEEDLTNYDPVGRALGSLRAALRRMAEAWVLR 243

Query: 193 DWITQKKESLVPFVIAGDFNRK---------INYLGNNDDFWKTIDPNDSLI-------- 235
             I ++ E+  P ++ GDFN                  +  W                  
Sbjct: 244 AEIVREIEAGHPVMVLGDFNDGENAVSTEIITGEAPFRNYAWMLRHDAKDRNDRYSEEEH 303

Query: 236 ------------------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                                K                 ID   + ++            
Sbjct: 304 RQISEDVQRLRLRSAEKLFVRKSLRDMVYTTAFGGVYESIDQIFLSRHFDPDHEGRIGEM 363

Query: 278 ILYNEDDIK---------SRGKRLSDH 295
             Y+  +              K  SDH
Sbjct: 364 TYYSVFNDHITDGSHPEAPYNKLASDH 390


>gi|300253219|gb|ADJ96599.1| APEX-like DNA repair enzyme [Camelus dromedarius]
          Length = 283

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/269 (10%), Positives = 63/269 (23%), Gaps = 63/269 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +  +  +++ SWN++ L                         + K    DI+ LQE 
Sbjct: 53  TSPSGKSATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                  K+ P+         +         S+ + ++ + +  +   +        G  
Sbjct: 98  KCSE--NKLPPELQELSGLPHQYWSAP----SDKEGYSGVGLLSRQCPIKVS----YGIG 147

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +       R  V            ++ +++ +                   +  + L   
Sbjct: 148 EEEHDQEGRVIVA-----EFDAFVLVTVYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
                 S  P V+ GD N     +   +                 F + +        F 
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254

Query: 239 KEKDSRCNANKNLRN---------KIPID 258
               +   A                  +D
Sbjct: 255 HLYPNTAYAYTFWTYMMNARSKNVGWRLD 283


>gi|156538689|ref|XP_001607775.1| PREDICTED: similar to ENSANGP00000013951 [Nasonia vitripennis]
          Length = 1114

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/328 (10%), Positives = 77/328 (23%), Gaps = 51/328 (15%)

Query: 21  AQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD------IVFLQ 72
            + +R  + ++N+N       V     ++     D   +     +   D       +  +
Sbjct: 530 TKPLRIGVATYNVNGGKHFRSVVYKDVTLSDWLLDAPKINSTVVDDSDDTPVDIFAIGFE 589

Query: 73  EMGSYNAVAKVFPKNT----WCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVRVL 124
           E+   NA   +   +     W          +H            +     +R ++V  L
Sbjct: 590 EIVDLNASNIMAASHENARAWAEELQKVLSRDHEYVLITYQQLVGVCLYVFIRPEHVGFL 649

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +               GN+ AV +   +       +  H  +     +  N      +  
Sbjct: 650 RDVAVDCVKTGLGGATGNKGAVAIRFVLFSTSFCFVCAHFAAGQSQVNERNADYAEIT-- 707

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTI 228
               + +   + +   +       GDFN +++                     D      
Sbjct: 708 ----RKVAFPMGRTLNAHDYVFWCGDFNYRVDMDKEDMKELIRRNELDEILQYDQLRVQQ 763

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVM-DQNAYKFLIQESF 275
           D  +    F +   +     K                    D  +   +           
Sbjct: 764 DQGNVFKNFSEGPITFPPTYKYDLFSDDYDTSEKCRQPAWTDRVLWKRRKLIHDXXXXXX 823

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                          + SDH P+    D
Sbjct: 824 XWNPGKLVFYGRAELKQSDHRPVIAVID 851


>gi|242072524|ref|XP_002446198.1| hypothetical protein SORBIDRAFT_06g003360 [Sorghum bicolor]
 gi|241937381|gb|EES10526.1| hypothetical protein SORBIDRAFT_06g003360 [Sorghum bicolor]
          Length = 308

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/318 (10%), Positives = 73/318 (22%), Gaps = 65/318 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + +++ N++             S         +      +    I+  Q       +  
Sbjct: 5   SITVMTLNLH------EGEQPSESPNSWEKRRDICVSVITSYSPTILCTQ-----QGLRW 53

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------LQQSYPLLGAKDS 136
                  C+    +  I+      N D +  I   K+ V +           P +    S
Sbjct: 54  QLDYLQQCLPGYEQFGISRKGSQDNTDEYCTIFYEKEKVELTEGGTFWLSESPSVPGSIS 113

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +       A     ++   +       + +    +        S  L  Q    L     
Sbjct: 114 WGANAPCIATWATFQLKRLEPPGFSFQIVNTNLDEVSPRARRRSALLTWQHIASL----- 168

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNL 251
                 +P +  G FN +   +       +      +          + + +    +   
Sbjct: 169 ---PPNLPVIYCGGFNTQKESMTGRFLLGRSREHGVVGDMRDAWPNARVRKNVSLIHTYH 225

Query: 252 RNKI---------------------------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
             K                             ID+ +        L+      I  N D 
Sbjct: 226 GFKGEKQGALEFLKLIFRALCLCWDRQTQDLHIDWILFRGR---PLVPALCEVINDNID- 281

Query: 285 IKSRGKRLSDHCPISIDY 302
               G   S H PI  ++
Sbjct: 282 ----GVYPSSHFPIFAEF 295


>gi|317032475|ref|XP_001394977.2| DNA lyase [Aspergillus niger CBS 513.88]
          Length = 555

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 69/294 (23%), Gaps = 61/294 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+ +WN+N +        W     R    +  +    +   ADIV  QE  +   +   
Sbjct: 3   LRITTWNVNGIRNPFSYEPW-----RGKRTFDAMFDILE---ADIVVFQETKIQRKDLRD 54

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR----------KKNVRVLQQSYPL 130
            +     W  ++S       +S         T   +R            N  V  +  P 
Sbjct: 55  DMVLVPGWDCYFSLPRVKKGYSGVVIYTRNATCAPIRAEEGLSGMLCPPNSSVSFRELPE 114

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--FLDSLENTYSPSCSLLSQQA 188
                 +        +E+       +   + +   +F    + S  N      S      
Sbjct: 115 NQQIGGYPTIEQLSQLEVDAATLDSEGRCVILEFPAFVLLGIYSPANRDESRDSFRRSFI 174

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +   I           + GD N     +              +               
Sbjct: 175 DLMDARIRNLVAMGKRVFVTGDLNISRGEIDAAHAGEAIRKGTLTEDDL----------- 223

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                           +  ++    +              G   SDHCP+   +
Sbjct: 224 ----------------DMQEWFCDSNIQ-----------EGLMGSDHCPVYAMF 250


>gi|302759140|ref|XP_002962993.1| hypothetical protein SELMODRAFT_78670 [Selaginella moellendorffii]
 gi|300169854|gb|EFJ36456.1| hypothetical protein SELMODRAFT_78670 [Selaginella moellendorffii]
          Length = 265

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 70/293 (23%), Gaps = 44/293 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +  +++N+    E   +                + +  +     ++  QE+    ++  
Sbjct: 1   SIVFMTYNV-WFREDLEL----------ERRMEAIGELIRQHQPHVICFQEV--TTSIYA 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F ++ W   +S  R    S+  +            K         P             
Sbjct: 48  IFQRSNW---WSGYRCSVSSELAA--KRAYFCLQLSKLPIDKFYRNPFHNT------IMG 96

Query: 143 RRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R      ++     ++ V   HL+S C   +         +    Q +     +      
Sbjct: 97  RELCLADIDCGNSTQLVVATTHLESPCP--APPKFDQMFSAERVAQMKEALATLKPLPN- 153

Query: 202 LVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
               V  GD N      G     N                  +  +      +   K  +
Sbjct: 154 ---VVFGGDMNWDDKLDGQPPLENGWMDAWTQLRAKEPGLTYDAKANPMLTGSRLQK-RL 209

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------LSDHCPISIDY 302
           D        ++    E            +   K+         SDH  + +  
Sbjct: 210 DRVFYHFRDFEVESIEMIGTKPIPGLTFEKETKKSLLKLPVLPSDHFGLVLKI 262


>gi|119605749|gb|EAW85343.1| deoxyribonuclease I, isoform CRA_a [Homo sapiens]
          Length = 212

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 61/215 (28%), Gaps = 17/215 (7%)

Query: 89  WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
           W    +   +++     ++         R   V  +   Y   G +   +   NR    +
Sbjct: 9   WDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDTFNREPAIV 68

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
                  ++    I        D++    +     L  Q +W           L   ++ 
Sbjct: 69  RFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW----------GLEDVMLM 118

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-AY 267
           GDFN   +Y+  +      +  + +      +         +       D  V+      
Sbjct: 119 GDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAY----DRIVVAGMLLR 174

Query: 268 KFLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300
             ++ +S     +      S    + +SDH P+ +
Sbjct: 175 GAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEV 209


>gi|301122963|ref|XP_002909208.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099970|gb|EEY58022.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 542

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 79/278 (28%), Gaps = 32/278 (11%)

Query: 27  VSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKV 83
           +S+NI T L+  +  S   +           +    + + AD V  QE        +   
Sbjct: 1   MSFNIRTSLASTDAGSTCSSWDG---IRKDNVISNIETVAADFVGTQETSDAQKAYLDAQ 57

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                  I  ST  L  ++   +     +      KN        P   +  ++     R
Sbjct: 58  LAGTYSVIGESTGSLNGNANEWNALYYRSDTWSLLKNGMFWLGPDPATMSA-AWGMTYYR 116

Query: 144 RAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
             V    +    G  I VL+ H ++                ++ +Q + + D        
Sbjct: 117 TCVWGRFQHIKTGASICVLNTHYETPGND----EAQENGSKIILEQIKTICD------AD 166

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               V+ GDFN   +Y      F   ++       F  +  S   + K        D+ +
Sbjct: 167 DNLIVLVGDFNALKSYSAMQILFENNMEDPSDETTFCGDMLSATCSVKY-------DFTL 219

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                      +    +      I   G   SDH  + 
Sbjct: 220 F------RAQSDDACHLKSEISRIDYDGCYSSDHAGLI 251


>gi|163735713|ref|ZP_02143143.1| putative endonuclease/exonuclease/phosphatase protein [Roseobacter
           litoralis Och 149]
 gi|161390966|gb|EDQ15305.1| putative endonuclease/exonuclease/phosphatase protein [Roseobacter
           litoralis Och 149]
          Length = 244

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/276 (11%), Positives = 66/276 (23%), Gaps = 43/276 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++ ++WNI+     +G                 + Q       DI+ LQE         
Sbjct: 5   KLKCMTWNIHRAKGSDGQVDPGRIES-------AISQILAPAAPDILALQEADEECPPHG 57

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      +     +                    + +  +               +
Sbjct: 58  GILNIAQISKATGLAYAHQDAALRWGSNSYGFL--GTILFLHNRFDQTHADVIDLPGHCH 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R AV +   I+ + + V+  HL             S S  L   Q + +  ++   +   
Sbjct: 116 RGAVAVETLIDRRAVRVISTHL-------------SLSQPLRIVQMRIIGQYL--MRRPK 160

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
           +  ++ GD N           +         +    K         +       +D  + 
Sbjct: 161 MQTILLGDLN-------EWRPWGGAAFCKAIVGTSLKGPAKCTFPARWPILP--LDRILT 211

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           D       +                     SDH P+
Sbjct: 212 DAPGRVESVGV----------LDHPGIHAASDHRPL 237


>gi|146420343|ref|XP_001486128.1| hypothetical protein PGUG_01799 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1022

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 82/309 (26%), Gaps = 52/309 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--------SYNA 79
           ++N+N   E +           ++ DY L+           + LQE+           ++
Sbjct: 622 TFNVNASCEDQDKFKSWLFPPGSSGDYDLV----------FIGLQEIVELTASQMVDTDS 671

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + +   +    +                +     IA+     ++  +    +      + 
Sbjct: 672 LRRQMWEMHLRVCLEANNTTQSRYILLWSGQLGGIALFLFVKQLELKEIHDVEGSFKKTG 731

Query: 140 AG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            G    N+ AV +    +   + ++  H  +                      + +K   
Sbjct: 732 FGGVSANKGAVAVRFNYSNTGLCLVASHFAAG------HGNTIERHQNFKTIGKGIKFSK 785

Query: 196 TQKKESLVPFVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPK 239
            ++ +     +  GDFN +IN                     D   + +   +S   F +
Sbjct: 786 NRRIKDHDAVIWLGDFNYRINLPLEQVHALVEKKDFPRLFEYDQLNQQMASGESFPYFDE 845

Query: 240 EKDSRCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
            +       K        D                ++  S  +I+       S   + SD
Sbjct: 846 MELRFKPTYKFDNGTSTYDTSEKQRI---PAWTDRILSLSRKKIIKQHLYDCSDEIKFSD 902

Query: 295 HCPISIDYD 303
           H P+     
Sbjct: 903 HRPVYATLT 911


>gi|119492566|ref|ZP_01623784.1| alkaline phosphatase [Lyngbya sp. PCC 8106]
 gi|119453035|gb|EAW34205.1| alkaline phosphatase [Lyngbya sp. PCC 8106]
          Length = 2080

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/390 (11%), Positives = 94/390 (24%), Gaps = 114/390 (29%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYNA 79
           ++  ++N  +L+      L  +           + +  + ++ D++ + E      + N 
Sbjct: 1   MKFATFN-ASLNRDTAGQLITDLTIPDNPQAQNIAEIIQQVNPDVLLINEFDYNSENPNQ 59

Query: 80  VAKVFPKNT---------------WCIFYSTER------------------------LIN 100
              +F +N                +   Y                              N
Sbjct: 60  AIDLFQQNYLGVDQNIADSAGTVNYPFVYVAPSNTGVASGFDLDNNGEIVNTPGADGYGN 119

Query: 101 HSKRDSNNDIHTAIAVRKKNVR----------VLQQSYPL------LGAKDSFSRAGNRR 144
            +    N      + +  K              L +  P          ++ +       
Sbjct: 120 DALGFGNFPGQFGMVLLSKYPIDTENIRTFQDFLWKDMPDALLPDATPEENDWYSTEELA 179

Query: 145 AV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK---- 192
            +        ++ +E++G+ I VL  H     F    +     +   +   A ++     
Sbjct: 180 VLPLSSKSHWDIPLEVDGEIIHVLASHPTPPTFDGEEDRNGRRNHDEIRFWADYVTPGEG 239

Query: 193 DWITQKK----------ESLVPFVIAGDFNRKINYLGNNDDFWKTI-------------- 228
           D+I               +   FVI GD N       + DD    +              
Sbjct: 240 DYIYDDNGNSEAPTGGLPADAAFVIMGDQNADPFDGDSTDDAILQLIENPNILASATDVN 299

Query: 229 ---DPNDSLIRFPKEKDSRCNANKNLRNK-----------IPIDYFVMDQNAYKFLIQES 274
              D N        +  +      N R             + +DY +   N         
Sbjct: 300 ITPDSNGGEFAATTQAGANVGQQGNPRFDTADFNDNAPGNLRVDYVLPSPNLQIDETG-- 357

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     + S     SDH  +  D  F
Sbjct: 358 --VFWPAPGTLGSDLIDASDHRLVFADLSF 385


>gi|182624597|ref|ZP_02952379.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens D str. JGS1721]
 gi|177910201|gb|EDT72589.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens D str. JGS1721]
          Length = 263

 Score = 58.8 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 74/267 (27%), Gaps = 40/267 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKNTWCIFY---------STERLI 99
                L +       D++ LQE       +       ++ + +               L+
Sbjct: 18  YKIKYLAKTIVEEKYDVIALQEASQSIKASVKEGNLKEDNYGLVLIEEINKLGGEEYHLV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     + +  K+  V  +S+  +    S +   +R+ V+  ++I  + I  
Sbjct: 78  WDYSHIGYDIYEEGLCILTKHKIVNSESF-YISKSHSKTFWRSRKIVKATIDIKNENIDF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              H+            +       + Q + L   +   KES       GDFN       
Sbjct: 137 YSCHMGW----------WHDKEESFTFQVENL---LAHAKESKNRAFFMGDFNNNAFLKN 183

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKI--PIDYFVMDQNAYKFLIQES 274
              DF K+    D+      +        N      N     ID    ++N         
Sbjct: 184 EGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRNT-------- 235

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISID 301
                          + +SDH  + I+
Sbjct: 236 -KVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|237843341|ref|XP_002370968.1| DNA-(apurinic or apyrimidinic site) lyase,  putative [Toxoplasma
           gondii ME49]
 gi|211968632|gb|EEB03828.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Toxoplasma
           gondii ME49]
 gi|221502330|gb|EEE28063.1| ap endonuclease, putative [Toxoplasma gondii VEG]
          Length = 630

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/357 (10%), Positives = 84/357 (23%), Gaps = 99/357 (27%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------- 75
            + +V+WN+N+++ +           R +  +    ++ + +D DI+ LQE+        
Sbjct: 200 PLSIVTWNVNSIAAR----------IRDSRQWFYFSRFLQKIDPDILCLQEVKLAAHGPP 249

Query: 76  ----------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                             + V+ V  +      ++     +     ++      +   +K
Sbjct: 250 GAKRGDGMPRDHGRIKDSDKVSSVEARELREALHTLLPNHSLLISLADWRYSGQMMFIRK 309

Query: 120 NVRVLQQSYPLL--GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           +V+V    Y L   G          R  +        +   VL  +  +           
Sbjct: 310 DVQVCSLRYNLSLDGCPAHEHDFEGRVILA-----EFEAFCVLTTYSPNNGATPKSFERR 364

Query: 178 SPSCSLLSQQAQWLKDWITQKKES----LVPFVIAGDFNRKINY---------------- 217
                 + Q           +         P V  GD N                     
Sbjct: 365 RLWDERMLQFVTQCSSSPHCEGLPVQLLKKPLVWVGDLNCAPEDIDLSDPDQFRSVIHET 424

Query: 218 ----------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA------NKN----- 250
                                 F   ++  + +  F +                      
Sbjct: 425 ADGTIDPDNIGQAGCTDAERRRFRAILERGNLVDAFRELHPRTEPPPLESAEYSWRGFGG 484

Query: 251 -------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                      + +D+ V+ +     +                      SDHCP+ +
Sbjct: 485 SGSRGLLRGLGMRLDHIVLTETLMPAVELVRIC-----GAGKSKANFFGSDHCPVLV 536


>gi|126660415|ref|ZP_01731525.1| hypothetical protein CY0110_01315 [Cyanothece sp. CCY0110]
 gi|126618281|gb|EAZ89040.1| hypothetical protein CY0110_01315 [Cyanothece sp. CCY0110]
          Length = 92

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++WN+  L +       ++           L Q  KNL AD++ +QE+GS  +   
Sbjct: 3  TFKVMTWNLENLFQPNLNDAEQSRK--YQEKLQSLSQLIKNLAADVIGVQEVGSPESFED 60

Query: 83 VFPKNTWCIFYS 94
          +  +      YS
Sbjct: 61 LINQLNGQYPYS 72


>gi|332140686|ref|YP_004426424.1| hypothetical protein MADE_1006420 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550708|gb|AEA97426.1| hypothetical protein MADE_1006420 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 404

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/397 (10%), Positives = 98/397 (24%), Gaps = 95/397 (23%)

Query: 2   IRKYVLALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDY-- 54
           IR    A         +++A       +++ ++N++  +        K S K        
Sbjct: 3   IRALFFATPLIPALWVSTLAYSKEEQMLKVATFNVSMEATNYKALGMKPSDKVLQHVLST 62

Query: 55  ------TLLRQYAKNLDADIVFLQEMG-------------------SYNAVAKVFPKNTW 89
                   + +  + ++ DI+ L E                     S   +  V    T+
Sbjct: 63  GEYPQVKNIAEIIQRVNPDILLLNEFDYIADKRIGIEAFMENYLNVSQQGLEPVDYPYTY 122

Query: 90  CIFYSTER--------------LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               +T                    +           +A+  K    +         K 
Sbjct: 123 VAPVNTGEPTTFDLDNNGKAEGFGGDAYGFGLYPGQYGMALLSKYPIDVDGIRTFQTFKW 182

Query: 136 SFSRAGNRRAV------------------------------ELLVEINGKKIWVLDIHLK 165
                     +                              ++ V++ GK + +L +H  
Sbjct: 183 HHMPHPQVPIIPDESGSTDKGKPWYDVEEWAALRLSSKSHWDVPVKVAGKTVHILAMHPT 242

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLK----DWITQKKES------LVPFVIAGDFNRKI 215
              F  + +     +   +   A +L      +I   +           FV+ GDFN   
Sbjct: 243 PPNFDGNEDRNGKRNFDEIRLMADYLSPDKGAYIYDDRGEKVSLETNTRFVLLGDFNAAD 302

Query: 216 NYLGNNDDFWKTIDPNDSLI--------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
               + +   + +  +  +                ++ +           DY +  +  +
Sbjct: 303 IGNKHREGVIEQLTEHPLVNNDIIPTSAGGAGASGAKFSNRFTAYWGARADYVLPSRFGF 362

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLS-DHCPISIDYD 303
                  F     ++     R +  S DH  + I   
Sbjct: 363 DVNDAGVFWPAKTSDLYRLVRDRAASSDHRLVWISLS 399


>gi|271966339|ref|YP_003340535.1| hypothetical protein Sros_4992 [Streptosporangium roseum DSM 43021]
 gi|270509514|gb|ACZ87792.1| hypothetical protein Sros_4992 [Streptosporangium roseum DSM 43021]
          Length = 597

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 86/320 (26%), Gaps = 45/320 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--- 77
              +RL++WN+        V    +  + T  + T +  Y   ++ DI+F+ E       
Sbjct: 115 GTPLRLMAWNLF-------VGGTFDRKETTGENLTQMIDYMNEVNPDILFVVEGYGSGQK 167

Query: 78  --NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS---YPLLG 132
             + +     +             ++S    N  ++T + V K   R        + + G
Sbjct: 168 ILDGLNAGRAEGDRFTGVQLTTPEDYSHNGDNLWLYTKLKVEKVYPRYADADIDSFNIGG 227

Query: 133 AKDSFSRAGNRRAVELLVEINGKKI---WVLDIHLKSFCFLDSLENTYSPSCSLLSQQA- 188
           A+       +  A  L    +G          +           +       +L      
Sbjct: 228 ARLGLPNGKHVHAFSLWTWHDGWAYGDTHDAAVQNTHGLPRTKTDEQILEGDNLRRVAMG 287

Query: 189 -QWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNND--------------DFWKTIDPND 232
              L+  I     +   P ++ GD N + +   +                 + K      
Sbjct: 288 KAILEKAIPSFIGDDDAPVLMGGDLNAQSHLDWSEQFADAPGHGGVVLPWPYTKLYTDAG 347

Query: 233 SLIRFPK-EKDSRCNANKNLRN-------KIPIDYFVMD-QNAYKFLIQESFSEILYNED 283
            +  F     D+     +              IDY     ++      +     +  ++ 
Sbjct: 348 FMDTFRYANADAGMYPGRTWSPFHGMGAIPGRIDYVFARGKDVRILGSRADIRRLPRHQQ 407

Query: 284 DIKSRGK-RLSDHCPISIDY 302
                     SDH  +  D 
Sbjct: 408 TPLDPQYPFYSDHGSVITDI 427


>gi|86142990|ref|ZP_01061412.1| Endonuclease/exonuclease/phosphatase [Leeuwenhoekiella blandensis
           MED217]
 gi|85830435|gb|EAQ48894.1| Endonuclease/exonuclease/phosphatase [Leeuwenhoekiella blandensis
           MED217]
          Length = 362

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/269 (10%), Positives = 71/269 (26%), Gaps = 44/269 (16%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
           +      +   +V +   D+  L Q  ++ + DI+ L E                    S
Sbjct: 98  NSDNSFKVMVANVLQKNKDHNKLLQEVESKNPDILLLLETDRVWL----------NAVNS 147

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
           T        + +  D    + +  K      + +  +           +         +G
Sbjct: 148 TLSEKYTYYKGAPLDNTYGMLLYSKLPMQNAEIHYQIDDSIPSIETKVKLP-------SG 200

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
               +  IH        +  +T   +          +     + +   +P ++ GDFN  
Sbjct: 201 AYFQLYAIHPTPPMPQHNPMSTDRDA---------EMMKTAFKSRNKQIPVLVIGDFNDV 251

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                     +K +   + L            +  +   + P+D+  + ++         
Sbjct: 252 AWSESTQ--LYKEVS--ELLDLRIGRGLFNTFSANSKIMRWPLDHIFVSEHFRAK----- 302

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    ++       SDH P   +  
Sbjct: 303 ---------EVLRGNDVGSDHFPAYAELT 322


>gi|310286996|ref|YP_003938254.1| Conserved hypothetical membrane spanning protein with
           endonuclease/exonuclease/phosphatase family domain
           [Bifidobacterium bifidum S17]
 gi|309250932|gb|ADO52680.1| Conserved hypothetical membrane spanning protein with
           endonuclease/exonuclease/phosphatase family domain
           [Bifidobacterium bifidum S17]
          Length = 309

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 71/278 (25%), Gaps = 58/278 (20%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   +    ++   +++ LQE  + N   K  
Sbjct: 87  RVMTFNVY----------------KGHADAKAIVDIVRDQRVEVLALQE--TTNDFVKKL 128

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +           + S++D      +             +  +           
Sbjct: 129 DEAGIHSYL-------PYSQVSSSDGVCGNGIWSATELGRPVDDEVGSSASFMPGG---- 177

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              +       ++  + +H  +                  S+  + L +  + +      
Sbjct: 178 --TVTFGGGKAQLRFVSVHTTAPIPG------------YWSRWKRSLDELASMRSREGSR 223

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           +V  GDFN   ++    +                       N     R    ID+ V+D+
Sbjct: 224 YVFMGDFNATTDHTPFRNILGNRFSDAARQSGHGFTFTWPSNKLPLPRFAG-IDHIVLDK 282

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    +I                     SDH  +    
Sbjct: 283 D----IIAGQMQVKSVAS----------SDHAALLATI 306


>gi|312215074|emb|CBX95027.1| similar to DNA lyase [Leptosphaeria maculans]
          Length = 650

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 43/359 (11%), Positives = 82/359 (22%), Gaps = 102/359 (28%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           VR+ +WN+N +    G   W      T   +  +        ADIV +QE  +   +   
Sbjct: 2   VRITTWNVNGIRNPFGYKPW-----STNRTFNAMFDIL---QADIVIMQELKIQRKDLTD 53

Query: 82  KVFPKNTWCIFYSTERLI----------------------NHSKRDSNNDIHTAIAVRKK 119
            +     +  ++S  +                         +S             +R +
Sbjct: 54  DMVLVPGFDCYFSLPKHKKGRYYSLGQSWTAHRHHVLIGVGYSGVGIYTRQSVCAPIRAE 113

Query: 120 N-------VRVLQQSYPLLGAKDSFSRAGNRRAVE-------LLVEINGKKIWVLDIHLK 165
                          Y  L    S         V          ++  G+ + VL+    
Sbjct: 114 EGLMGVLCPPNSSTPYRELPESTSIGGYPTPSQVADIGDVDPAALDAEGRCL-VLEFPAF 172

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------- 216
               + S  N+              L   I   K+     ++ GD N   +         
Sbjct: 173 VLFGVYSPANSNGLRDDFRLGFLMMLDARIRNLKKMGKNLILTGDLNVSRDLIDTAKADD 232

Query: 217 -------------YLGNNDDFWKTIDPND-------------SLIRFPKEKDSRCNANKN 250
                           N   F + +                       +    R     +
Sbjct: 233 HMRAEGMTHEEYLSTPNRRIFNQLLFNGKVPGKRDKGREEPVLYDLCREYHPDREGMFTH 292

Query: 251 L---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                          ID+ +       + ++ +              G   SDHCP+  
Sbjct: 293 WEQKINARPGNFGSRIDFILCSIEIKDWFMEANIQ-----------EGLMGSDHCPVYA 340


>gi|327182593|gb|AEA31040.1| hypothetical protein LAB52_00220 [Lactobacillus amylovorus GRL
           1118]
          Length = 367

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/323 (9%), Positives = 94/323 (29%), Gaps = 60/323 (18%)

Query: 25  RLVSWNI------------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
            ++++N+                     ++ +G      S +   +    + +  K  + 
Sbjct: 59  SIITYNVGFGAYNHNFDFFMDKGELKNGTKTQGTRGTAFSKQSVLASTDGVIKTMKKQNP 118

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ- 125
           D +  QE+ +++  +    +    +     +  +H   ++ +  +    +   +  V   
Sbjct: 119 DFMLFQEIDTHSTRSHYVNQV--NLVEHAFKNYDHVFANNFHSAYLDWPLYDPHGSVQSG 176

Query: 126 --QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPS 180
                          +     A         +   V+   +K       ++S  + Y   
Sbjct: 177 LLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGGKELIVINSHMSAYDKG 236

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             +   Q + L   I  + ++    ++ GDFN  +                D L  F  +
Sbjct: 237 GKMRKAQMKILSKVIEAEYKAGNYVIVGGDFNHALGR--------------DMLTHFDHQ 282

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN------------------- 281
           +      +   +  +P D+ ++     + +     +++ Y                    
Sbjct: 283 EKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISKNIK 342

Query: 282 -EDDIKSRGKRLSDHCPISIDYD 303
            +    +   R +DH P+ + + 
Sbjct: 343 AKATDINTDYRYADHNPVRLGFS 365


>gi|229495004|ref|ZP_04388753.1| endonuclease/exonuclease/phosphatase [Rhodococcus erythropolis
           SK121]
 gi|229318098|gb|EEN83970.1| endonuclease/exonuclease/phosphatase [Rhodococcus erythropolis
           SK121]
          Length = 295

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 71/292 (24%), Gaps = 63/292 (21%)

Query: 12  FLVPCTAS-VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
             VP T     + +R++S N+   +      +    +                 + D V 
Sbjct: 63  VAVPVTPPRTGEAMRIMSINVAKGAADVDAVVDAARL----------------HNVDAVA 106

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +QE         + P     +  +    I        ++      +  +      +    
Sbjct: 107 VQE---------LTPAFAAALEVAGMPGIFPFSVIRPDNDARGTGLWSRFPISEPRQMEG 157

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G             V   +E  G K  ++  H+ +        N               
Sbjct: 158 FGF----------ACVAGTIEFKGGKYDLVATHITAPIQDQDSTN-----------WITE 196

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L         +L P VIAGDFN  +++                     +   +   AN +
Sbjct: 197 LAQIRALLDTNLNPLVIAGDFNATVDHRQFRGLLHGGTQDAARQ--AGRFYVNTFPANWS 254

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +D+ ++                        +     SDH  I    
Sbjct: 255 WPPFAALDHILVPPELTA--------------TTFDTVEIAGSDHLAIVSTL 292


>gi|110800029|ref|YP_694880.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens ATCC 13124]
 gi|110674676|gb|ABG83663.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens ATCC 13124]
          Length = 263

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 73/267 (27%), Gaps = 40/267 (14%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKNTWCIFY---------STERLI 99
                L +       D++ LQE       +       ++ + +               L+
Sbjct: 18  YKIKYLAKTIVEEKYDVIALQEASQSIKASIKEGNLKEDNYGLVLIEEINKLGGEKYHLV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     + +  K+  V  +S+  +      +   +R+ V+  ++I  + I  
Sbjct: 78  WDYSHIGYDIYEEGLCILTKHKIVNSESF-YISKSHCKTFWRSRKIVKATIDIKNENIDF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              H+            +       + Q + L   +   KES       GDFN       
Sbjct: 137 YSCHMGW----------WHDKEESFTFQVENL---LAHAKESKNRAFFMGDFNNNAFLKN 183

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKI--PIDYFVMDQNAYKFLIQES 274
              DF K+    D+      +        N      N     ID    ++N         
Sbjct: 184 EGYDFLKSNGLIDTYNLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRNT-------- 235

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISID 301
                          + +SDH  + I+
Sbjct: 236 -KVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|326776703|ref|ZP_08235968.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657036|gb|EGE41882.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 399

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 42/281 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++VSWN                     SD      Y ++  AD+  LQE  +     
Sbjct: 136 GALKVVSWNTFF--------------WDQDSDTDAFYAYLRSRSADVYLLQEYQNARG-- 179

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDSFS 138
               +       +  R        +            +      ++     L     S++
Sbjct: 180 ---DEPAPIDDLARIRKEFPGFHIATEGE---FLTLSRFPITSARALRPDGLAPPDTSWA 233

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD------SLENTYSPSCSLLSQQAQWLK 192
              N R +   ++++G+ + + + HL     +D      +   +         +  + L+
Sbjct: 234 DYWNVRVLRTDIDVDGRTLSLYNTHLPDLLNVDRNPLTPAYHRSVRQLSERRDRHFEALR 293

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + +     +  P V+AGD N             +  D                       
Sbjct: 294 EDLD---ANGHPVVLAGDLNVLPGTGD-----LRWFDGLRDAADAGDSVYPATFPVSGPA 345

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
               +D+  +       L ++S  +        +    RLS
Sbjct: 346 LW-RLDWAFVSPRI--DLHRQSVQDPPAALSTHRLIDLRLS 383


>gi|320170231|gb|EFW47130.1| synaptojanin-PB [Capsaspora owczarzaki ATCC 30864]
          Length = 1161

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 77/313 (24%), Gaps = 55/313 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYNAVAKV 83
           L +WN+N                   + ++ L      +  D+  V  QE+    A   +
Sbjct: 530 LGTWNVNG-----------GKRAGEEALHSWLIVPPGEMPPDVYAVGFQEIVDLTAGNIM 578

Query: 84  FPKNTWCIFY----------STERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSY 128
              ++    +          S       +                I VR  ++  ++   
Sbjct: 579 NADDSHRTAWEKAIKDTINSSVFPNGQPASYALVVSQQLVGVCLCIFVRSDSISHVRDVV 638

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                      AGN+ AV +   +    I  +  HL +     +  N+            
Sbjct: 639 IGKHKTGFGGYAGNKGAVAIRFRMYSTSICFVCAHLAAGQSNVTERNSDYADIMSRMSFG 698

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPND 232
           +       +   +       GDFN +I+                     D      +   
Sbjct: 699 K------GRVINNHDIVFWIGDFNYRIDLPKEEVEGCVKNGDLATLYEADQLRIQRENGA 752

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGK 290
               F +         K        D     + A    +  +  +     +         
Sbjct: 753 VFAGFVEAPIIFVPTYKYDLYSDVFD---TSEKARAPAWCDRVLWRGENVDVLTYNRAEL 809

Query: 291 RLSDHCPISIDYD 303
           + SDH P+   +D
Sbjct: 810 KSSDHRPVYATFD 822


>gi|261868267|ref|YP_003256189.1| hypothetical protein D11S_1606 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413599|gb|ACX82970.1| endoribonuclease L-PSP [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 296

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 65/281 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            + RL+ WN++           K          +   +       D V LQE+ +   +A
Sbjct: 73  NRFRLLVWNLH-----------KGQDAGWQQALSRFAK-----GRDFVLLQEVLNTQHLA 116

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                     + +      ++   +     + + +  K        Y      + + R  
Sbjct: 117 --------TQYSAQFPTALYASAFAYLQQQSGVEILSKFPL---HFYCAGSKPEPWIRIP 165

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A   L    GK + ++++HL +F    +              Q + L   I+  +  
Sbjct: 166 KVGAAMSLPLAGGKNLLLVNVHLINFELNPTAYGE----------QLRTLMQLISHHQG- 214

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-FPKEKDSRCNANKNLRNKIPIDYF 260
             P + AGDFN   +Y  +     + I         FP++   R   N        +D+ 
Sbjct: 215 --PLIFAGDFNSWSSYRMSR--IHELITEYGLQEVTFPQDHRLRFLGNP-------LDHI 263

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +             + I    +  +S     SDH P+ ++
Sbjct: 264 FIRG----------LNVINATTEPTES-----SDHAPLLLE 289


>gi|296120099|ref|ZP_06838653.1| putative exodeoxyribonuclease [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967253|gb|EFG80524.1| putative exodeoxyribonuclease [Corynebacterium ammoniagenes DSM
           20306]
          Length = 302

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/338 (10%), Positives = 81/338 (23%), Gaps = 94/338 (27%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + S N+N +             +R   +   +  + +   ADIV +QE+ +  A  +
Sbjct: 2   SLTIASVNVNGIRA--------ACKQRNELN-PGMNAWLEETSADIVLMQEVRANPAQTE 52

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  K +     +   L               + +  +      +             +  
Sbjct: 53  LALKPS---LEAGWHLAMADALTPGAKGRAGVGILSRTPLTDVE---------IGFGSFL 100

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                +     G  + V  ++L S        +  SP               + ++    
Sbjct: 101 ESGRWIEATAAG--VRVASLYLPSG-------DVNSPKLDEKYNFLDEFAGVLEKRAAEH 151

Query: 203 VPFVIAGDFNRKI---------------NYLGNNDDF----------------------- 224
              VI GD+N                   +L     F                       
Sbjct: 152 TDMVIGGDWNICHRAQDLKNNKPNEKKSGHLPEERAFMDHVFGAFPDAHAQEKKGLGDWL 211

Query: 225 ----------WKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQN 265
                     W+  +         + +            +           IDY     +
Sbjct: 212 GIVDYETKTNWQPTEDPKWFDVARRLEPEAEGPYTWWTYRGQAFNNDAGWRIDYQAATDS 271

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +   +              S  +R SDH P+ ++Y+
Sbjct: 272 MLQRAQRSWVE-------KAPSVEERWSDHSPLMVEYN 302


>gi|149708543|ref|XP_001488584.1| PREDICTED: angel homolog 2 (Drosophila) [Equus caballus]
          Length = 544

 Score = 58.8 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 63/206 (30%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 166 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 225

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++       +  R        AI  +     +L  +       D   
Sbjct: 226 YGTEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDVPL 280

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      + C  ++          +   Q   L   I+  
Sbjct: 281 LDRDNVGLVLLLQP-----RIPSTASPALCVANTHLLYNPRRGDIKLTQLAMLLAEISSV 335

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 336 AHQKDGSFCPIVMCGDFNSVPGSPLY 361


>gi|302503739|ref|XP_003013829.1| hypothetical protein ARB_07941 [Arthroderma benhamiae CBS 112371]
 gi|291177395|gb|EFE33189.1| hypothetical protein ARB_07941 [Arthroderma benhamiae CBS 112371]
          Length = 527

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/350 (12%), Positives = 79/350 (22%), Gaps = 84/350 (24%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              K+ ++S+N   L       + K   +R       L     +   +IV LQE  +   
Sbjct: 10  SPHKINIISFNCWGL-----KYISKFRRERLLEIGKRLAN--ADFPPEIVGLQECWTQED 62

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAK 134
              +  +    + Y                    +A+  K        +         A 
Sbjct: 63  YNAIRNETRHILPYGKFYHSGIFGG--------GLAILSKWPIEESSMFQYPLNGRPTAF 114

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   +      + I      V  +           E   S  C   + QA  +   
Sbjct: 115 FRGDWFVGKGVAYARIRIGPGSKDVAAVFCTHLHAPYEREPNDSYIC-HRTAQAWEIAKL 173

Query: 195 ITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDPNDSLIRFPKEK----- 241
           +    E     +  GDFN                  D W+ + P  S+     +      
Sbjct: 174 MRGAAERGHLVIGLGDFNMLPLSFAHRLITAHAPVTDVWRYLRPESSIGAAIDDAEIARN 233

Query: 242 -----------------DSRCNANKN---------------------LRNKIPIDYFVMD 263
                            D   N  +                            +DY  + 
Sbjct: 234 KPIPSADFNILENGATCDGAFNTWRWSKEDQKRLAREGHISVDGSLPDPYAKRLDYIFVG 293

Query: 264 Q----NAYKFLIQESFSEILYNE--------DDIKSRGKRLSDHCPISID 301
                N    ++  S S   +N         +   +    LSDH  +   
Sbjct: 294 NGSYLNHTDDVVPSSSSSWKWNIHSARVGMMERHPTLHCSLSDHFSVEAT 343


>gi|239942885|ref|ZP_04694822.1| hypothetical protein SrosN15_17967 [Streptomyces roseosporus NRRL
           15998]
 gi|239989345|ref|ZP_04710009.1| hypothetical protein SrosN1_18733 [Streptomyces roseosporus NRRL
           11379]
          Length = 324

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 74/296 (25%), Gaps = 67/296 (22%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            L    +    S    + +VS N++  +     +                 +      AD
Sbjct: 95  TLFGGALTDKRSGGGDLTVVSHNVDEGNTDPAGT----------------ARVLAAAGAD 138

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ L+E+   +A             YS E    +            + +  ++     ++
Sbjct: 139 VLALEELSDASA-----------AVYSRELAAAYPHHAVIG----GVGIWSRHPLADVKA 183

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            P++           R     +    G  + V  +HL S     +   T   + +     
Sbjct: 184 VPIMP--------WTRAMRATVRAPEGPPVAVYAVHLASVRVSAAGFTTGRRNDAAREL- 234

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
                     + E+    V+ GDFN        +           S              
Sbjct: 235 ------AAALRSETAPRVVVLGDFNGAY----RDRALAPVTSRLRSAQGEAGAGLGFTWP 284

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  + ID  ++       +   +   +              SDH P++    
Sbjct: 285 AAFP--VVRIDDVLVRG-----MTPRAAWTLPAT----------GSDHLPVAARLS 323


>gi|68063675|ref|XP_673834.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase)
           [Plasmodium berghei strain ANKA]
 gi|68070845|ref|XP_677336.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56491972|emb|CAI02361.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase),
           putative [Plasmodium berghei]
 gi|56497413|emb|CAH98029.1| hypothetical protein PB000718.02.0 [Plasmodium berghei]
          Length = 346

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/362 (11%), Positives = 96/362 (26%), Gaps = 114/362 (31%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------G 75
           +V+WN+N+++ +           +    +    ++   ++AD++  QE+           
Sbjct: 8   IVTWNMNSITVRY----------KNKEKWKRFMKFVNEINADVLCFQEVRLPALNISKNE 57

Query: 76  SYNAVAKVFPKN---------------------TWCIFYS--TERLINHSKRDSNNDIHT 112
           S N   KV+                         + I           ++   S  +I  
Sbjct: 58  SKNVNNKVYGGKKNEGEERNRGSVKNTDQKSLIDYKIVEEILKNDFKEYNGYFSLANIKY 117

Query: 113 A---IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           +   + V+K       +   L     +      R  +     +     ++L  +  +  F
Sbjct: 118 SGQLVLVKKSIKVKSVRYNLLFETDPNIHNDEGRIIL-----LEFSNFYLLSTYSPNNGF 172

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------------ 217
             +     S   +        +K+++   K      +  GD N                 
Sbjct: 173 DQTKFKRRSLFDN-------QMKEFVLFMKNENKNLIWTGDLNIAPEDVDLSHPIEFRKM 225

Query: 218 ---------------LGNNDDFWKTIDPNDSL---------------IRFPKEKDSRCNA 247
                                 +KTI  N  L                 + ++ +   N 
Sbjct: 226 KKGNVPKEYIGQPGCTDAERANFKTILKNGDLIDSYRYFENYKIKNDPTYKRKTNINDNI 285

Query: 248 NKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                           + ID+F++ +N            I  +   +       SDHCP+
Sbjct: 286 YTWRCPFLIGKSCNRAMRIDHFIVSKNLL-----NQIENIEIHGYSVFHTNFYGSDHCPV 340

Query: 299 SI 300
            +
Sbjct: 341 IL 342


>gi|327302098|ref|XP_003235741.1| sphingomyelinase [Trichophyton rubrum CBS 118892]
 gi|326461083|gb|EGD86536.1| sphingomyelinase [Trichophyton rubrum CBS 118892]
          Length = 527

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/350 (11%), Positives = 72/350 (20%), Gaps = 84/350 (24%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              K+ ++S+N   L       + K   +R       L     +   +IV LQE  +   
Sbjct: 10  SPHKINIISFNCWGL-----KYISKFRRERLLEIGKRLAN--ADFPPEIVGLQECWTQED 62

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAK 134
              +  +    + Y                    +A+  K        +         A 
Sbjct: 63  YNAIRNETRHILPYGKFYHSGIFGG--------GLAILSKWPIEESSMFQYPLNGRPTAF 114

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   +      + I      V  +           E   S  C   + QA  +   
Sbjct: 115 FRGDWFVGKGVAYARIRIGPGSKDVAAVFCTHLHAPYEREPNDSYIC-HRTAQAWEIAKL 173

Query: 195 ITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDPN--------------- 231
           +    E     +  GDFN                  D W+ + P                
Sbjct: 174 MRGAAERGHLVIGLGDFNMLPLSFAHRLITAHAPVTDVWRYLRPESSIGAAIDDVEIARN 233

Query: 232 ------DSLIRFPKEKDSRCNANKNLR----------------------NKIPIDYFVMD 263
                 D  I                                           +DY  + 
Sbjct: 234 KPIPSADFNILENGATCDGAFNTWRWSKEDQKRLAREGHISVDGSLPDPYAKRLDYIFVG 293

Query: 264 ------------QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                        ++         S  +   +   +    LSDH  +   
Sbjct: 294 NGSYLNHTDDVIPSSSSSWKWNIHSARVGMMERHPTLHCSLSDHFSVEAT 343


>gi|90418862|ref|ZP_01226773.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336942|gb|EAS50647.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 371

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 65/255 (25%), Gaps = 45/255 (17%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
           K+   D+   R    N D DI+ + E   +        ++ +     +            
Sbjct: 125 KKGNRDFAAFRAVVTNADPDILLVLETDQWWDTQLGALQDRYRASIESLPQAVEYYGLH- 183

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                           L   +PL      F       +V   V +    +  + IH +  
Sbjct: 184 ----------------LFSKFPLADPAVDFWFETGTPSVTADVTLPAGTVRFIGIHPRPP 227

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                    +S +    +     L        +S +P ++AGDFN           F + 
Sbjct: 228 QS-----FEHSTALRDGTMGQAALAA-----ADSTMPTILAGDFNAVPWE----RTFRRM 273

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +     L              ++     P+D+ +              +           
Sbjct: 274 LRVGRLLDPRVGRGYFATYDAESPILAWPLDHILFQDAIGLLGFSSLPNVD--------- 324

Query: 288 RGKRLSDHCPISIDY 302
                SDH P+  + 
Sbjct: 325 -----SDHYPVMAEL 334


>gi|239835498|dbj|BAH78179.1| cytolethal distending toxin B [Escherichia coli]
          Length = 273

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 90/305 (29%), Gaps = 50/305 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +  L+       A ++   ++ +WN+   +         +           +RQ  
Sbjct: 1   MKKLLFLLMILPGISFADLSD-FKVATWNLQGSNAPTENKWNTH-----------VRQLV 48

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVF-------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113
               A DI+ +QE G+  A A +                ++T       +         A
Sbjct: 49  TGSGAVDILMVQEAGAVPASATLTEREFSTPGIPMNEYIWNTGTNSRPQELFIYFSRVDA 108

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            A R     V  +    +          +R  + + +  +         H  +   +DS 
Sbjct: 109 FANRVNLAIVSNRRADEVIVLPP-PTVVSRPIIGIRIGND----VFFSTHALANRGVDSG 163

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
               S      ++Q   ++              IAGDFNR           + T+DP   
Sbjct: 164 AIVNSV-FEFFNRQTDPIRQAANWM--------IAGDFNRSPAM------LFSTLDPGIR 208

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                        A+        +DY V+  +     +      +  +      RG+  S
Sbjct: 209 NHVNIIAPPDPTQAS-----GGVLDYAVVGNS-----VSFVLPLLRASLLFGLLRGQVAS 258

Query: 294 DHCPI 298
           DH P+
Sbjct: 259 DHFPV 263


>gi|300173607|ref|YP_003772773.1| exodeoxyribonuclease III [Leuconostoc gasicomitatum LMG 18811]
 gi|299887986|emb|CBL91954.1| exodeoxyribonuclease III [Leuconostoc gasicomitatum LMG 18811]
          Length = 272

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 86/303 (28%), Gaps = 59/303 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI++++        ++   R    + +L         D+  +QE  +      +  
Sbjct: 3   LISWNIDSINA-----AVEHKSARGEMTWDVLT-TIAARKPDVFAIQE--TKLKPTGMTK 54

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           K +  I         +    +    ++   +  +   +  + +P + A D+    G    
Sbjct: 55  KQSEAIAELFPDYHVYLDSSTARSGYSGTMMLTRIEPLSIE-FPKIAAPDTMDIEGR--- 110

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              ++ +     +V  ++  +     +  +             Q L        ++  P 
Sbjct: 111 ---IITLEFDNYYVSTVYTPNSGSALARLSARGEWDDAYRAYIQTL--------DAKKPV 159

Query: 206 VIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + +GD N     +                   + +  +           +  +       
Sbjct: 160 IFSGDMNVAHEEIDLKNFKTNHNSAGFTNQEREKFTALLDAGFTDTLRMQNPNTPEIYTW 219

Query: 251 L----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                       +   IDY+++     + ++     +    +           DH PIS+
Sbjct: 220 WAQISKTSKINNSGWRIDYYLVSDRIAENVLNTDVLDTGLRQ-----------DHAPISL 268

Query: 301 DYD 303
             +
Sbjct: 269 TIN 271


>gi|328856732|gb|EGG05852.1| hypothetical protein MELLADRAFT_107286 [Melampsora larici-populina
           98AG31]
          Length = 419

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 64/207 (30%), Gaps = 16/207 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+++++WN+      +      +   +       + +   N D D++ LQE+        
Sbjct: 34  KIKIMTWNVLAQCLVKRNLFPGSDCLKWKERGKTITEEIINYDPDVICLQEVDRLTDHGP 93

Query: 83  VFPKNTWCI---FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +  K  +         E                   + +  +R+ +++Y         +R
Sbjct: 94  ILTKAGYDYTYKIGGYEEEGKQHGLLIGWKRQEYEQINEHLIRLDEETYKEKIGISRSTR 153

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                        +   + ++      F         ++      S+Q  +L   I   K
Sbjct: 154 NIGLICALKSKLDSSSSVGLVIGTAHLFW--------HARFVYERSRQIAFLSRGIQSFK 205

Query: 200 ESLVPFV-----IAGDFNRKINYLGNN 221
            SL   +     +AGDFN + N  G  
Sbjct: 206 TSLDHSINWTTCLAGDFNEEPNSFGYR 232


>gi|218662414|ref|ZP_03518344.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli IE4771]
          Length = 357

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 78/293 (26%), Gaps = 59/293 (20%)

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK------KNVRV 123
            LQE+  +  +        + +  +  R     + + +  I  A+ +R+      K    
Sbjct: 63  CLQEIDIWPPLQAFEYGYLFRMVGNGYRQKFLVEGNDSRGIDVAVLMREETRDGQKIELK 122

Query: 124 LQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
             +S+ +   +D                +   R  +EL + I G+ + +  +H KS    
Sbjct: 123 DIRSHAMTTYRDFDLFDEDLALSNRIDDKIFKRDCLELDLLIGGRPLSLYVVHFKSMGNP 182

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFN-------------- 212
               +    +  +   +A+ ++  I     +       F I GD N              
Sbjct: 183 RDGLDGRQSTLPVRRAEARAVRRIIEDSFGAGRTAKKSFAICGDMNDYQERVDVVGRRGA 242

Query: 213 --RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQN 265
                + L              +     + +        + R         +DY  +   
Sbjct: 243 GYHFEHQLEAESALDVFSHDGFAENVVRRRQPLDRWTLYHTRGPQEQHLCQLDYIWLSPA 302

Query: 266 AYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCPISIDYD 303
                       I               +           + SDHCP+ +  D
Sbjct: 303 LAAHNSGRLPEIIRNGQPFRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLD 355


>gi|294657885|ref|XP_460185.2| DEHA2E20284p [Debaryomyces hansenii CBS767]
 gi|199433023|emb|CAG88458.2| DEHA2E20284p [Debaryomyces hansenii]
          Length = 435

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 94/319 (29%), Gaps = 53/319 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK-NLDADIVFLQEMGSY 77
           S    ++L++ N   L       + K   +R  +    L +    + D DIV LQE+   
Sbjct: 11  SAPHPIKLLTLNTWGL-----KFVSKLRKERLEAIGDRLSKPTSLDEDYDIVALQEVWCE 65

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--IAVRKKNVRVLQ--QSYPLLGA 133
                      W    +  R     +R   + I +   +A+  K          +P+ G 
Sbjct: 66  ED---------WLYISNKCRERYPYRRIFKSGIVSGPGLAILSKIPIESTFLYRFPINGR 116

Query: 134 KDSFSRAGNRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +F R        + + +        +    L S       +   +      + QA   
Sbjct: 117 PSAFFRGDWLVGKSIAITLLKPHTNDSLPIAILNSHMHAPYAQTGDASYSCHRACQAWDF 176

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-----------------WKTIDPNDSL 234
             ++   ++S    +  GD N K   L                          I P D  
Sbjct: 177 SRFVNMLRKSGYAVIQVGDLNSKPGSLPYKLFTVDGGLSDSWEICHNSKNSSIIAPEDIA 236

Query: 235 IRFPKEK--------DSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNED 283
              PKE+        DS+ N  +  R +     +DY ++  +     I  S     + + 
Sbjct: 237 TMDPKEQILVGGITCDSQLNTWRAHRERWEACRLDYALI-DSYNIKPINASVK---FTDI 292

Query: 284 DIKSRGKRLSDHCPISIDY 302
                    SDH   S + 
Sbjct: 293 LPPPLNCSYSDHFAYSTEL 311


>gi|289207257|ref|YP_003459323.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix]
 gi|288942888|gb|ADC70587.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix]
          Length = 257

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 80/270 (29%), Gaps = 59/270 (21%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
            +    +AD+V +QE             +            + +  D+    ++ +A+  
Sbjct: 21  DWLPKTEADVVCIQETK--------AQIHQIQGEPFHPPGYHSAYVDAVKPGYSGVALYS 72

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           +       +       D+  R          VE+    + V+ ++L S    D  +++  
Sbjct: 73  RRQPDEVITRIGFEEADNEGRY---------VEMRFGDLSVVSLYLPSGSSGDHRQDSK- 122

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------- 223
                  +   + + W+ ++ +    +VI GD+N     +   +                
Sbjct: 123 ------WRFLDFFRPWLAERMQDGREWVICGDWNIAHKEIDLRNWKSNQKNSGFLPEERA 176

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQES 274
           +   +     ++   +  D R        N+           IDY +      +      
Sbjct: 177 WLDHLFDEIGMVDVFRRLDDRPEQYTWWSNRGQAWAKNVGWRIDYQIATPGIAE------ 230

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   D       R SDH P  IDYD+
Sbjct: 231 -----TARDPYIHTDDRYSDHAPFWIDYDY 255


>gi|296230134|ref|XP_002760575.1| PREDICTED: protein angel homolog 2 isoform 1 [Callithrix jacchus]
          Length = 544

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 166 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 225

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +       D   
Sbjct: 226 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFYRPDISL 280

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      S C  ++          +   Q   L   I+  
Sbjct: 281 LDRDNVGLVLLLQPK-----IPCAASPSICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 335

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 336 AHQKDGSFCPIVMCGDFNSVPGSPLY 361


>gi|86136001|ref|ZP_01054580.1| possible endonuclease/exonuclease/phosphatase family protein
           [Roseobacter sp. MED193]
 gi|85826875|gb|EAQ47071.1| possible endonuclease/exonuclease/phosphatase family protein
           [Roseobacter sp. MED193]
          Length = 403

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 81/305 (26%), Gaps = 73/305 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + S+N+  L   +       S   +        +      LDADIV  QE+     + 
Sbjct: 4   FTIASFNVKNLIGPDQEYYRFQSYTPEEYAWKSDWMADQILTLDADIVGFQEIFEEEPLR 63

Query: 82  KVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTA----------------------- 113
           +V  +       +      +R   + ++     +                          
Sbjct: 64  EVIAEADARGIQANAATVPDRSKRYHRKAIFRKLAYGPYGDAGLAFAPNINDTDKPGQRR 123

Query: 114 --IAVRKKN-----VRVLQQSYPLLGAKDSFSRAG-----------NRRAVELLVEINGK 155
             +A+  +        V+Q+  P L    S                +R  ++  + ING+
Sbjct: 124 PGLAILSRFGFVGTPEVIQELDPPLDIPMSHLGGEEEAGHYTLRCLSRPILKARIPINGQ 183

Query: 156 KIWVLDIHLKSF--------------------CFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            + V + HLKS                                 S      +A  L+  I
Sbjct: 184 IVTVFNCHLKSKLGEFITPPGAPQAPETVLTAYDPAGRALGALRSALRRMGEAWVLRRAI 243

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
             + E   P ++ GDFN      G +    + I        +            +  ++ 
Sbjct: 244 LDELEQDRPVLVLGDFND-----GEHAVSSEIISGEVPFRNYSWMLRHDAKHGSDRYSRQ 298

Query: 256 PIDYF 260
             D  
Sbjct: 299 ENDQI 303


>gi|290991312|ref|XP_002678279.1| endonuclease/exonuclease/phosphatase family protein [Naegleria
           gruberi]
 gi|284091891|gb|EFC45535.1| endonuclease/exonuclease/phosphatase family protein [Naegleria
           gruberi]
          Length = 378

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 77/328 (23%), Gaps = 74/328 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-----AKNLDADIVFLQEMGS 76
              +  ++NI+      G            +    L  Y       +   DI+ L E   
Sbjct: 78  DGFKCCTYNIHVFKSGNG-----------QTTLDKLIDYLTVGQIGSKPFDIIGLNEAFE 126

Query: 77  YNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   + P N      +      +    +                   Q++ L    
Sbjct: 127 SKYRRGQILTPLNEIQKSLTKYYGTEYKCYYAPTCKTMGNCFITALPVKKTQTWRLAKGP 186

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                 G R  + L +++   K  V    L    F++        S     Q  ++++ +
Sbjct: 187 G-----GVRNVLGLQLDLEKCKSPVEYFFLTHLDFINEEWRVKQFS-----QILEFMEKF 236

Query: 195 ITQ-KKESLVPFVIAGDFNRKIN--------------------YLGNNDDFWKTIDPNDS 233
           + Q        FV+ GDFN                            +      +     
Sbjct: 237 MRQSFNTKDNNFVMMGDFNAMYKNDYTQEFWDQIQMDRMQEQWEPAVSTLMDILLGDIKD 296

Query: 234 LIRFPKEKDSRCNANKNLRNKI-----------------PIDYFVMDQNAYKFLIQESFS 276
                ++           R                     IDY +  ++  K ++     
Sbjct: 297 ERLPIQKNLKCEKLYDTWRMCNKELQFNGRNLSSSRLKTRIDYILCSKSLSKNVLHSCID 356

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          +SDH P+   + F
Sbjct: 357 TKSKTTS--------ISDHNPVITHFSF 376


>gi|255089412|ref|XP_002506628.1| predicted protein [Micromonas sp. RCC299]
 gi|226521900|gb|ACO67886.1| predicted protein [Micromonas sp. RCC299]
          Length = 583

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/353 (10%), Positives = 95/353 (26%), Gaps = 95/353 (26%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK-----------NLDADIVFLQE- 73
           +VSWNI     ++ V+  + + K    D   + +                D D+V LQE 
Sbjct: 27  IVSWNIGLRGLRQLVASDRGADKTAAKDQHGVSRQLGYGCIDSLLDSLGSDVDVVALQEC 86

Query: 74  -MGSYNAVA-KVFPKNTWCIFYSTERLINHS-----KRDSNNDIHTAIAVRKKNVRVLQQ 126
            + S + ++ ++   + W  +++     +        R  +   +  +A   +  + +  
Sbjct: 87  KLTSRSDLSPEIACPSGWDSYHAVCGDASGGAIPTTSRGRSKTGYAGVATYVRIGKRVVA 146

Query: 127 SYPLLGAKDSFSRAGNRR---------------AVELLVEINGK-------KIWVLDIHL 164
           +   +    +      R                A  L ++  G+          + ++++
Sbjct: 147 AEEGVTGALTPPERIARGDAVGHYGRMSEAFDRARMLELDSEGRCVLVDLGAFVLFNVYV 206

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---- 220
            S    D     +             ++       ++    V+ GD+N     + +    
Sbjct: 207 PSLSSDDEDRERFKLDF------LVAVEIRYRALLDAGRRVVLCGDWNVSYGVIDSAVAI 260

Query: 221 ---------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-------------- 251
                               + +   +      ++                         
Sbjct: 261 EERLMDEALCERNQSRQWLRRQVSGGEGAKGAERDPLVDVFRRDYPAARGAYTCWNVSAG 320

Query: 252 ----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                    IDYF+ D+     + +              +     SDH P+ I
Sbjct: 321 AQLTNYGSRIDYFLCDEVTAASVARCGI-----------APKHEGSDHAPVFI 362


>gi|224282535|ref|ZP_03645857.1| hypothetical protein BbifN4_01790 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 309

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 73/278 (26%), Gaps = 58/278 (20%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   +    ++   +++ LQE  + N   K  
Sbjct: 87  RVMTFNVY----------------KGHADAKAIVDIVRDQRVEVLALQE--TTNDFIKKL 128

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N         R  +  V   +  + G            
Sbjct: 129 DEAGIHSYLPYSQVSSSDGVYGNGIWSATELGRPVDDEVGSSASFMPGGT---------- 178

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              +       ++  + +H  +                  S+  + L +  + +      
Sbjct: 179 ---VTFGGGKAQLRFVSVHTTAPIPG------------YWSRWKRSLDELASMRSREGSR 223

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           +V  GDFN   ++    +                       N     R    ID+ V+D+
Sbjct: 224 YVFMGDFNATTDHTPFRNILGNRFSDAARQSGHGFTFTWPSNKLPLPRFAG-IDHIVLDK 282

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    +I                     SDH  +    
Sbjct: 283 D----IIAGQMQVKSV----------AGSDHAALLATI 306


>gi|308234431|ref|ZP_07665168.1| Endonuclease/exonuclease/phosphatase [Atopobium vaginae DSM 15829]
 gi|328944277|ref|ZP_08241741.1| hypothetical protein HMPREF0091_10966 [Atopobium vaginae DSM 15829]
 gi|327491196|gb|EGF22971.1| hypothetical protein HMPREF0091_10966 [Atopobium vaginae DSM 15829]
          Length = 462

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 80/300 (26%), Gaps = 55/300 (18%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK-----NTW 89
                    ++    T      + Q A     D +F QE+ + +  +    +     +T+
Sbjct: 180 GTHGKAVSLESVEAATQGSIATIAQAANGSAPDFMFFQEIDTDSDRSYHVNQVKAVKDTF 239

Query: 90  CIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN- 142
             + S+     HS   +         +++ I    +   +           D   +  + 
Sbjct: 240 STYESSFASNFHSGFLAYPLHDMHGKVNSGILTLSRVNMINSIRRSYPVTTDFPDKYFDL 299

Query: 143 -RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R        +  K          S   ++S  + Y       + Q + L + +  +   
Sbjct: 300 DRCFQITRYTLPDK---------HSLVLINSHMSAYDKGGKFRAAQLKLLTNTLVSEYAK 350

Query: 202 LVPFVIAGDFNRK--------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR- 252
               +  GD+N           +  G  D   K ++ +D    F        +     R 
Sbjct: 351 GNYVIAGGDWNHALCDSLELYPSEQGIPDWV-KPLNASDLPQGFTCVAADNLSEVPTCRG 409

Query: 253 ----------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         +D F++  N                       G   SDH P+ + +
Sbjct: 410 DDIAYEKGVTYTTTVDGFIVSNNVEAQAHN-------------IDTGFATSDHNPVLLTF 456


>gi|21222008|ref|NP_627787.1| hypothetical protein SCO3592 [Streptomyces coelicolor A3(2)]
 gi|5123867|emb|CAB45459.1| putative membrane protein [Streptomyces coelicolor A3(2)]
          Length = 330

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 74/300 (24%), Gaps = 55/300 (18%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L+L   L+   +    +  + S N+   +     +                 +       
Sbjct: 84  LSLFGGLLGDKSGAGGEFTMASHNVGAENPDPAGT----------------ARDLAASGV 127

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ L+E+ + +             +++ +  +    +              + V +   
Sbjct: 128 DVLALEEITAQDREVYEKGLAREYPYHTVQGTVGLWSKLP--------LSGTRPVDIATD 179

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             PL   K +       RA+   V      + V   HL S                    
Sbjct: 180 YGPLADTKPADVTMAGNRALRTTVATERGPLVVYVAHLGSVRLNPRAGFWTDSRDRNAWA 239

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             + L        +      + GD N  ++         + +    S +   +E      
Sbjct: 240 LGEALA------ADRSERIALLGDLNGTVDD--------RALAGITSQLHSVQEAAGNGF 285

Query: 247 ANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       ID  ++                      + + G   SDH P++    +
Sbjct: 286 GFTWPAKFPVARIDQILVRG------------VEPTGSWTLPATG---SDHLPVAAGVSW 330


>gi|53712350|ref|YP_098342.1| hypothetical protein BF1058 [Bacteroides fragilis YCH46]
 gi|60680519|ref|YP_210663.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis NCTC 9343]
 gi|253563613|ref|ZP_04841070.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265762542|ref|ZP_06091110.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52215215|dbj|BAD47808.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60491953|emb|CAH06714.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis NCTC 9343]
 gi|251947389|gb|EES87671.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263255150|gb|EEZ26496.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301162057|emb|CBW21601.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis 638R]
          Length = 342

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/367 (12%), Positives = 87/367 (23%), Gaps = 91/367 (24%)

Query: 1   MIRKYVLALVFFLVPCTA-SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           M+R  +L +  +L    A     +++++  NI                      +  +  
Sbjct: 1   MLRYSLLNITLWLFAVMAYGKGSELKVLQMNIWQEGTMVKGG------------FEAIAD 48

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               L+ DIV   E+ +Y+    +                       N+ +   I  + K
Sbjct: 49  EVARLEPDIVLFSEVRNYHGKQFI------SRILQALEERGKKYYGENSKLDVGILSKYK 102

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF------CFLDSL 173
                 +  P    +D          ++  + ING+ + V   HL             S 
Sbjct: 103 IE----EQAPNCPLEDDAG-----SVLKARIRINGRDVVVYSAHLDYTHYACYLPRGYSG 153

Query: 174 ENTYSPSCSLLSQQA-----------QWLKDWI-TQKKESLVPFVIAGDFNRKINYLGNN 221
                    +L   A           + +   I   +KE     ++ GDFN   +     
Sbjct: 154 VTWKKLDAPVLDAVAIEKANNESMRDEAICHVIEDARKEKGNIILLGGDFNEPSHLDWKE 213

Query: 222 -------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI------------- 255
                              +  N       + K      +                    
Sbjct: 214 NTKNLWDHNGTVVRWDCSVLLENAGFKDAYRTKYPNPVTHPGFTFPSDNEGVPVQKLSWA 273

Query: 256 -------PIDYFVMDQNAYKFLIQESF------------SEILYNEDDIKSRGKRLSDHC 296
                   ID+     +    L   S              E    +  I   G   +DH 
Sbjct: 274 PDADERDRIDFIYFMPDRKLKLKDVSVVGPSKSIVRSERVEESGKDSFITPLGVWPTDHK 333

Query: 297 PISIDYD 303
            +   + 
Sbjct: 334 AVMATFS 340


>gi|284931023|gb|ADC30961.1| membrane nuclease MnuA [Mycoplasma gallisepticum str. F]
          Length = 389

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 88/322 (27%), Gaps = 58/322 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +RL+SWN              +  + T++ +  + +  +  DAD+V L E+   N   
Sbjct: 84  GDLRLMSWNTLNFG---------SRSEPTSNKFMNIIRTIQLSDADVVGLSEI---NYDD 131

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++  +       S+       K  + N   +  ++    +   Q   P +    + +   
Sbjct: 132 QLLAQRLNDALGSSWSYTFSGKNFNENYPRSKESIL--ILYKNQVVQPEVSKAINPNNIY 189

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN--------TYSPSCSLLSQQAQWLKD 193
            R       +I G     +           +  N        +   S  +   QA     
Sbjct: 190 TRPLWYTKFKIIGFDYSFITFFGHFDAPGVNANNGETSAAGFSRQGSQEIKEAQAIATVF 249

Query: 194 WITQKKESLVPFVIAGDFNRKIN-----YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + +      + A D N +               +   D N       +   S  N  
Sbjct: 250 SDLKTQYPDTDIIGAADTNIRETNNRVFTSDQYSLNYINFDNNRPYY---RTTLSERNGY 306

Query: 249 KNLRNKIPI-------------------------DYFV-MDQNAYKFLIQESFSEILYNE 282
            N  +K  I                         D      ++   +L   S        
Sbjct: 307 ANSYDKWFIYDADSQNILKKSDIPYKIDIINAFTDKIWDKQKSLAAWLASRSGMRNPNPS 366

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
           D        +SDH PI +D D+
Sbjct: 367 DFQLISN--VSDHAPILLDIDY 386


>gi|291009304|ref|ZP_06567277.1| putative exported phosphatase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 330

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/328 (11%), Positives = 88/328 (26%), Gaps = 79/328 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSY 77
           +VR+++WNI     + G             +   L      +  D+ F  E         
Sbjct: 29  QVRVLTWNILHGGREYG-----------PRNLPNLLDQVVAVRPDVFFTVETYGSGPDIE 77

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A+ +   K  +     T+R                + +  +     +   P  G  D F
Sbjct: 78  RALTERAGKGAYTGVRVTDRPPGEDN----------LWLFTRFPVSHRYPAPHGGVVDDF 127

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC---------------S 182
           +  G R  +      +G ++ +  + L      +      + +                 
Sbjct: 128 NFGGARVRL-----PDGAELNLFTVWLPYSDPWNGYLVDDNAAAIRTGVPPRHSGADVQR 182

Query: 183 LLSQQAQWLKDWITQKKE-----SLVPFVIAGDFN--RKINYLGNNDDFWKTID------ 229
             ++Q + + D +  +       +  P ++ GDFN     ++   +      +       
Sbjct: 183 AETEQQRHIDDIVRTQLPAMLGGNTDPVLMGGDFNTLAAHDWRPEHAACSGHLGMSYPLG 242

Query: 230 ---------PNDSLIRFPKEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQES 274
                      D+      +  +   +  + +          ID+     +      +  
Sbjct: 243 ATAAVTAAGFADTYRTAHPDVCAEPGSTWSPQPAERMITPQRIDFTFARGDVRVERSEVI 302

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
              I  +       G   SDH  +  D 
Sbjct: 303 DQRIPEHGP-----GVFYSDHAAVLTDL 325


>gi|223938834|ref|ZP_03630722.1| hypothetical protein Cflav_PD2054 [bacterium Ellin514]
 gi|223892532|gb|EEF59005.1| hypothetical protein Cflav_PD2054 [bacterium Ellin514]
          Length = 482

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 63/210 (30%), Gaps = 28/210 (13%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           LA  F L+      A  +RL +WN    +     +   +  + T           KNL  
Sbjct: 19  LAFCFCLLNV---QADTIRLTTWN---FAPVLVGATNVSPQQVTEIRLQEAAVMLKNLHP 72

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ LQ++  +N+  K+        +         S + +      AI  R   +    +
Sbjct: 73  DVILLQQVTDWNSCKKLAQYLKPETYRVLTC---SSFKSAGGAQQVAILSRNPALIAWSE 129

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            +                     V   G     + +  K+  F    +   + S   L  
Sbjct: 130 PWKNRSQS---------------VTAGGFAFAAIRLGNKNVGFFTIQQGD-AASAKQLLG 173

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           Q    ++W           VIAG+F     
Sbjct: 174 QIDSFRNW---TANRAEAMVIAGNFVDSPK 200


>gi|255637077|gb|ACU18870.1| unknown [Glycine max]
          Length = 393

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/257 (12%), Positives = 61/257 (23%), Gaps = 51/257 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             +  +++S+N+    E   +                +    +    D +  QE+     
Sbjct: 131 SGKAFKILSYNV-WFREDLEL----------HKRMKAIGDLVQFHSPDFICFQEVT---- 175

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKDS 136
                  N + IF  +     +    S+   +       V  K         P   +   
Sbjct: 176 ------PNIYDIFKRSTWWSGYRCSVSSEMDYSRPYFCMVLSKLPVKSFSKKPFSNS--- 226

Query: 137 FSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 R      VE   G  + +   HL+S                    QA    + +
Sbjct: 227 ---IMGRELCIAEVEAARGTSLVIATSHLESPSPGPPKW--DQMFSKERVVQANEAINLL 281

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            ++       V  GD N   N  G        +             +          N++
Sbjct: 282 KKQPN----VVFGGDMNWNDNLDGQY-----PLQDGWVDAWSQLRPNKNGWTYDTKANQM 332

Query: 256 ---------PIDYFVMD 263
                     +D F+  
Sbjct: 333 LTGNRTVQKRLDRFICR 349


>gi|217959722|ref|YP_002338274.1| putative secreted protein [Bacillus cereus AH187]
 gi|229138913|ref|ZP_04267492.1| hypothetical protein bcere0013_20260 [Bacillus cereus BDRD-ST26]
 gi|217065665|gb|ACJ79915.1| putative secreted protein [Bacillus cereus AH187]
 gi|228644538|gb|EEL00791.1| hypothetical protein bcere0013_20260 [Bacillus cereus BDRD-ST26]
          Length = 213

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 64/200 (32%), Gaps = 28/200 (14%)

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +A   K   + +++      ++S        A+ +     G K  V ++HL        
Sbjct: 32  GLAFLSKIPIIAEEAIWETDIEESNYC-----AIRITFTYKGCKFGVTNVHLNW------ 80

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                  S  +  +Q   + +WI  +       ++ GDFN     + +     K      
Sbjct: 81  ------KSSRIRQEQMNTVNNWIENRASDYE--LLCGDFNDDPFSMVHQYLIRKHWIDVA 132

Query: 233 SLIRFPKE--KDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                 +        +  KN   K         D+ ++ +NA         +  ++ +  
Sbjct: 133 QFKEIEENMIAQPTLDYRKNPNLKDDVKQEKRYDWIMIQENAAFEF-PTIENVSIFGDSA 191

Query: 285 IKSRGKRLSDHCPISIDYDF 304
           + S G   SDH  + +D  F
Sbjct: 192 LNSTGMFPSDHYGVFVDLKF 211


>gi|260784913|ref|XP_002587508.1| hypothetical protein BRAFLDRAFT_61294 [Branchiostoma floridae]
 gi|229272656|gb|EEN43519.1| hypothetical protein BRAFLDRAFT_61294 [Branchiostoma floridae]
          Length = 559

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 85/287 (29%), Gaps = 23/287 (8%)

Query: 39  GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           G+    +   +   D +   Q       D + LQE+    A  ++  +      Y    +
Sbjct: 268 GLDARPDPPHQPRPDVSHDIQVVFPYQLDFLCLQEVFDKRAGDRLARQLHRWFGYVVRDV 327

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
            NHS   +   +++ +    +   +                A  +  +   V +   K  
Sbjct: 328 GNHSLTRNCFVLNSGLFFASRYPILDVAFKHFPEKAKEEYLAC-KGLLMAKVLLGTTKEQ 386

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF------VIAGDFN 212
              +   +   L + E         LS    WL+++     +   P       ++ GDFN
Sbjct: 387 QRIVGYVANTHLQATEGDDQVRLQQLSHIPTWLEEFRQDTWQVNDPPDLVMFDLLCGDFN 446

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-----------RNKIPIDYFV 261
                  + D +   +    +        + +     +              K  +   +
Sbjct: 447 FNNLRSDHRDLWSHPLFDLYTDPCRTAPGEDKPWTVGSCVTTRCAACTCTMTKQTLTKIL 506

Query: 262 MDQNAYKFLIQE---SFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
              N  +  +     S    L   +++   ++   L+DH P+S+ + 
Sbjct: 507 RSSNKRQQFVASHLLSGVVGLRKPEEVMFTTQLAALTDHVPVSLRFS 553


>gi|150002997|ref|YP_001297741.1| hypothetical protein BVU_0401 [Bacteroides vulgatus ATCC 8482]
 gi|254883645|ref|ZP_05256355.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294775631|ref|ZP_06741140.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|319642283|ref|ZP_07996942.1| hypothetical protein HMPREF9011_02542 [Bacteroides sp. 3_1_40A]
 gi|149931421|gb|ABR38119.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254836438|gb|EET16747.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294450573|gb|EFG19064.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|317386139|gb|EFV67059.1| hypothetical protein HMPREF9011_02542 [Bacteroides sp. 3_1_40A]
          Length = 312

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/316 (10%), Positives = 82/316 (25%), Gaps = 70/316 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +    + + ++SWN+              S   +           K  +AD+V + E 
Sbjct: 22  TSSKESKKTLTVLSWNVWHGGH---------SKTYSGKGCEGTIDILKKSEADVVLMIET 72

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                             Y    ++  S   S N I   +++  +   + + ++    + 
Sbjct: 73  ------------------YGAAPMVADSLGYSYNLISDNLSIYSRYPIIRKYAFADSIST 114

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF----LDSLENTYSPSCSLLSQQAQW 190
            +F          ++++++GK + V +  L                   +  +   + + 
Sbjct: 115 FNFGG--------VMIDVDGKPVRVFNTWLHYLPDMRLVPTDKSKEEILAWEMEGTRDEE 166

Query: 191 LKDWITQKKE-----SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +   ++  +        +P ++ GDFN   +           +     +           
Sbjct: 167 IHKILSVLQPLLAEADSIPIIMGGDFNVHSHLDWTEATRNLYLHGGAVVDWPVSIAMEEA 226

Query: 246 NANKNLR-------------------------NKIPIDYFVMDQNAYKFLIQESFSEILY 280
               + R                             ID+        + +  E +   L 
Sbjct: 227 GFKDSFREMNPNPVANLGVTWLTDADSLETECRMDRIDFIYYQGKTIQAIASECYDNSLG 286

Query: 281 NEDDIKSRG-KRLSDH 295
                K       SDH
Sbjct: 287 KTFTFKGEDFFYPSDH 302


>gi|16125832|ref|NP_420396.1| hypothetical protein CC_1585 [Caulobacter crescentus CB15]
 gi|221234593|ref|YP_002517029.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter
           crescentus NA1000]
 gi|13422978|gb|AAK23564.1| hypothetical protein CC_1585 [Caulobacter crescentus CB15]
 gi|220963765|gb|ACL95121.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter
           crescentus NA1000]
          Length = 325

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/290 (9%), Positives = 63/290 (21%), Gaps = 64/290 (22%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             P T + +  +++V +N+   +                        +    DAD+V ++
Sbjct: 97  FKPATVAQSD-LKVVQFNVWHDNRSP----------------EKSLAWILAQDADVVVIE 139

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E    +                     N+              +  +   + +       
Sbjct: 140 EGAGESWP------------IVKALRANYPFASCGKGARCETWIFSRKKMIAR------- 180

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              +        A    +        V+ +H                       Q + L 
Sbjct: 181 -GGATFEGPYLSAAWATLADAKGPFTVIGVHYTWPVPAGP-----------QQAQGRKLA 228

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
              +         ++AGDFN                    +                   
Sbjct: 229 RLASGFDRKS--MILAGDFNSTPWSFTLKRQDETLGLRRWTRAMASWPAGRFSRIMAAPA 286

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +PID+    +      ++   +                SDH PI + +
Sbjct: 287 PFLPIDHVYAGEQWRAVKVERGPAV--------------GSDHRPIVVTF 322


>gi|134096669|ref|YP_001102330.1| putative exported phosphatase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133909292|emb|CAL99404.1| putative exported phosphatase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 333

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/328 (11%), Positives = 88/328 (26%), Gaps = 79/328 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSY 77
           +VR+++WNI     + G             +   L      +  D+ F  E         
Sbjct: 32  QVRVLTWNILHGGREYG-----------PRNLPNLLDQVVAVRPDVFFTVETYGSGPDIE 80

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A+ +   K  +     T+R                + +  +     +   P  G  D F
Sbjct: 81  RALTERAGKGAYTGVRVTDRPPGEDN----------LWLFTRFPVSHRYPAPHGGVVDDF 130

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC---------------S 182
           +  G R  +      +G ++ +  + L      +      + +                 
Sbjct: 131 NFGGARVRL-----PDGAELNLFTVWLPYSDPWNGYLVDDNAAAIRTGVPPRHSGADVQR 185

Query: 183 LLSQQAQWLKDWITQKKE-----SLVPFVIAGDFN--RKINYLGNNDDFWKTID------ 229
             ++Q + + D +  +       +  P ++ GDFN     ++   +      +       
Sbjct: 186 AETEQQRHIDDIVRTQLPAMLGGNTDPVLMGGDFNTLAAHDWRPEHAACSGHLGMSYPLG 245

Query: 230 ---------PNDSLIRFPKEKDSRCNANKNLRN------KIPIDYFVMDQNAYKFLIQES 274
                      D+      +  +   +  + +          ID+     +      +  
Sbjct: 246 ATAAVTAAGFADTYRTAHPDVCAEPGSTWSPQPAERMITPQRIDFTFARGDVRVERSEVI 305

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
              I  +       G   SDH  +  D 
Sbjct: 306 DQRIPEHGP-----GVFYSDHAAVLTDL 328


>gi|319787719|ref|YP_004147194.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
 gi|317466231|gb|ADV27963.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
          Length = 409

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/398 (8%), Positives = 81/398 (20%), Gaps = 108/398 (27%)

Query: 6   VLALVFFLVPCTASVAQ-------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           +LA +       A VA         +R+ ++N++     +        ++   +    + 
Sbjct: 10  LLAAMLSACSTPAPVAADEPRDDAPLRVATYNVSLY--DDQAGGLVARLQGGDAGARKVA 67

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--------- 109
              + +  D+V + E     A  +             +                      
Sbjct: 68  AVLQRVRPDLVLVNEFDHDEA-GRAADLFQREYLEQAQPGGGEPLHYPYRYLAPVNTGAP 126

Query: 110 -----------------------------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                                            + V  ++             + S    
Sbjct: 127 SGLDLDRNGTIGGEGRARGNDAWGYGLHPGQYGMLVLSRHPIDADAVRSFQLLRWSTMPG 186

Query: 141 GNRRA------------------------VELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             R                           ++ V      +  L  H     F    +  
Sbjct: 187 ARRPIDPATGKPWHDDAVWAQLRLSSKSHWDVPVRTPQGTVHFLVSHPTPPVFDGPEDRN 246

Query: 177 YSPSCSLLSQQAQWLKDWITQK----------KESLVPFVIAGDFNRKINY-LGNNDDFW 225
            + +   +     ++                       FV+AGD N       G+++   
Sbjct: 247 GARNADEIELWRHYISGGDDAWLCDDAGRCGGLAEGERFVVAGDLNNDPADGDGHHEAIL 306

Query: 226 KTIDPNDSLIRFPKEKDSR---------------------CNANKNLRNKIPIDYFVMDQ 264
             ++    L       +                                 + +DY +   
Sbjct: 307 GLLEHPRVLRMATPRSEGGAEKARAYAAAGLRRVGAPEHVTGDFGPRSGTMRLDYVIPST 366

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +    F     +     + G   SDH  + +D 
Sbjct: 367 GFEA-IGSGVFWPASTDPAAAIADG---SDHHLVWVDL 400


>gi|311262408|ref|XP_003129169.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Sus
           scrofa]
          Length = 552

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/342 (10%), Positives = 90/342 (26%), Gaps = 66/342 (19%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQ++ S  
Sbjct: 186 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQKLKSCR 245

Query: 79  AVAKVFPKNTWCI------FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
               +   N + +        S +   +               V+K  V   Q +     
Sbjct: 246 VKWWLLAINGFFLQSSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSD 305

Query: 133 AKDSFSRA---GNRRAVELLVEINGKKI---------------WVLDIHLKSFCFLDSLE 174
             ++        +   V +++E++ +                  +L +      +     
Sbjct: 306 GSEAMLNRVMTKDNIGVAVVLEVHKELFGAGECSVKPIHAADKQLLIVANAHMHWDPEYS 365

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY----------- 217
           +       +   + + + +  + +        + +P V+  D N   +            
Sbjct: 366 DVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNGGV 425

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKIPI 257
             N+ DF +       +      K+                         N     K  I
Sbjct: 426 ADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFKGVI 485

Query: 258 DYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           DY    +   N    L       ++ N           SDH 
Sbjct: 486 DYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHF 527


>gi|327261945|ref|XP_003215787.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Anolis
           carolinensis]
          Length = 530

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 83/324 (25%), Gaps = 71/324 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           +RL+SWN+N L    G +  K                   L AD++ LQE      +   
Sbjct: 1   MRLLSWNVNGLRAGAGAAGLKP--------------LLDALGADVICLQETKITRDLLEE 46

Query: 82  KVFPKNTWCIFYSTER-LINHSKRDSNND----------IHTAIAVRKKNVRVLQQSYPL 130
            +     +  ++S  R    +S   +               + +  + +       +   
Sbjct: 47  PLAVVEGYNAYFSFSRTRSGYSGVATFCKATATPEAAEEGLSGLWTKHEGAIGCYGAPGD 106

Query: 131 LGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
              ++  +  +  R  +        ++       +  +C     E        L      
Sbjct: 107 FTTEELQALDSEGRAVITRHRICTSEQQETTLTVVNVYCPRADPEKPERGEFKLRFYHL- 165

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKIN--------------YLGNNDDFWKTI------- 228
            L+        +    VI GD N                       +     +       
Sbjct: 166 -LQARAEALLRAGGHVVIMGDINTAHKPIDHCDPGDLESFQEHPGRNWLDGFLWEPGKES 224

Query: 229 ------DPNDSLIRFPKEKDSRCN----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                       +   +++   C      +++L     IDY + D+             +
Sbjct: 225 PHGELFVDTFRFLHPTQKEAYTCWCNVTGSRHLNYGTRIDYILADRALA----------L 274

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
              ++         SDHCP+    
Sbjct: 275 SELKEAQLRPEVFGSDHCPVQAVL 298


>gi|323448661|gb|EGB04556.1| hypothetical protein AURANDRAFT_72478 [Aureococcus anophagefferens]
          Length = 1523

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 70/217 (32%), Gaps = 23/217 (10%)

Query: 22  QKVRLVSWNINT----LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74
           Q++ L+SWN+      L E    +  +            LR + + L AD+V LQE+   
Sbjct: 3   QQLHLISWNVAGWRTTLEEMTRTTKARKGRSPEEEHQAALRSWLERLRADVVCLQEVKLK 62

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                A A++         + T    N  K          +A   +              
Sbjct: 63  RSDVEAQARLLGAAADDGSWETYWCCNDGKARGQRAGLNGVATLVRGGAFGVLRADAKPL 122

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            D       R  V            + ++++ +               +      + L+ 
Sbjct: 123 GDPDFDDEGRCLV-----TEHGGFVLFNVYVPNAGGG--------ARVAYKMAWLRALRS 169

Query: 194 WIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            +  ++  +  P ++AGD N K+    ++   ++++D
Sbjct: 170 AMDRERAATGKPAILAGDLNAKMGPNDSH-WTFRSVD 205


>gi|153871481|ref|ZP_02000641.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS]
 gi|152072049|gb|EDN69355.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS]
          Length = 335

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 71/251 (28%), Gaps = 51/251 (20%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            +Y+ L Q        I+ +QE G+ + V  +     + +                N   
Sbjct: 109 KNYSALIQLVITEKPTILIVQE-GNRHWVKHLKALFPYQLV-------------PPNSRF 154

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
              ++  +      Q   L   +        R ++ + V++N K I ++  H        
Sbjct: 155 FGTSIFSQLPFEQTQVLALGSQE--------RESLHVKVKVNEKMISLVTTHPLPPIG-- 204

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                        + Q   +K +I        P ++  D N  +          K  +  
Sbjct: 205 ------QHFFERRNNQLFAVKSFIQSLSG---PKILMSDLNISMWSPFYV----KLFENT 251

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +                    IPID+ ++  +                  +I++    
Sbjct: 252 GLVNARQGFGWLPSWPTFLPIFMIPIDHCLVSPDM--------------KVVNIRTSQSI 297

Query: 292 LSDHCPISIDY 302
            SDH P+ ++ 
Sbjct: 298 GSDHLPLIVEL 308


>gi|194364886|ref|YP_002027496.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
 gi|194347690|gb|ACF50813.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
          Length = 401

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/404 (10%), Positives = 95/404 (23%), Gaps = 111/404 (27%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----------VRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           +R  +LAL         + A            +RL ++N +  S++ G  + +       
Sbjct: 3   LRPQILALALLCGATAPAFATSPAMTEKPSAALRLATYNTSLYSDETGGLIKELEGDSEH 62

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-- 109
           +    +    +    D+V L E   ++   +             +         +     
Sbjct: 63  AR--KIAAVLQQARPDLVLLNEF-DFDDAHRAADLFQKRYLEVAQPGGGKPLHFAYRYLA 119

Query: 110 ------------------------------------IHTAIAVRKKNVRVLQQSYPLLGA 133
                                                   + V  +      +       
Sbjct: 120 PVNTGVPSGLDLDNNGVVGGEGRSRGNDAWGYGLHPGQYGMLVLSRYPIDEAKVRSFQLL 179

Query: 134 KDSFSRAGNRRA------------------------VELLVEINGKKIWVLDIHLKSFCF 169
           K S      R                           ++ V+     +  L  H     F
Sbjct: 180 KWSAMPGAIRPVDPRTGKSFYNDHVWSQLRLSSKSHWDVPVKTPAGVVHALVSHPTPPVF 239

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQK----------KESLVPFVIAGDFNRKINYLG 219
               +   + +   L    ++L                       FVI GD N       
Sbjct: 240 DGPEKRNAARNHDELRLWQEYLSKGDKPWLCDDKGQCGGLAQDARFVILGDLNNDPVDGD 299

Query: 220 NNDDFWKTIDPNDSLIRFP-------------------KEKDSRCNANKNLRNKI---PI 257
              +    +  N  ++R+P                   + K +  +A  +   K     +
Sbjct: 300 GRHEAIVELIENARVLRYPTPRSVGAEQTSLAYAAKGIERKGAPFHATGDFGPKSGTMRL 359

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           DY +      +++    F     + +   + G   SDH  + +D
Sbjct: 360 DYVLPSTGF-EYVGSGVFWPANESPEAKIADG---SDHHLVWVD 399


>gi|294660189|ref|NP_852795.2| membrane nuclease MnuA [Mycoplasma gallisepticum str. R(low)]
 gi|284811839|gb|AAP56363.2| membrane nuclease MnuA [Mycoplasma gallisepticum str. R(low)]
 gi|284930255|gb|ADC30194.1| membrane nuclease MnuA [Mycoplasma gallisepticum str. R(high)]
          Length = 389

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 89/322 (27%), Gaps = 58/322 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +RL+SWN              +  + T++ +  + +  +  DAD+V L E+   N   
Sbjct: 84  GDLRLMSWNTLNFG---------SRSEPTSNKFMNIIRTIQLSDADVVGLSEI---NYDD 131

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++  +       S+       K  + N   +  ++    +   Q   P +    + +   
Sbjct: 132 QLLAQRLNDALGSSWSYTFSGKNFNENYPRSKESIL--ILYKNQVVQPEVSKAINPNNIY 189

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN--------TYSPSCSLLSQQAQWLKD 193
            R       +I G     +           +  N        +   S  +   QA     
Sbjct: 190 TRPLWYTKFKIIGFDYSFITFFGHFDAPGVNANNGETSAAGFSRQGSQEIKEAQAIATVF 249

Query: 194 WITQKKESLVPFVIAGDFNRKIN-----YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
              + +      + A D N +               +   D N       +   S  N  
Sbjct: 250 SDLKTQYPDTDIIGAADTNIRETNNRVFTSDQYSLNYINFDNNRPYY---RTTLSERNGY 306

Query: 249 KNLRNKIPI-------------------------DYFV-MDQNAYKFLIQESFSEILYNE 282
            N  +K  I                         D      ++   +L   S  +     
Sbjct: 307 ANSYDKWFIYDADSQNILKKSDIPYKIDIINAFTDKIWDKQKSLAAWLASRSGMKNPNPS 366

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
           D        +SDH PI +D D+
Sbjct: 367 DFQLISN--VSDHAPILLDIDY 386


>gi|148609410|ref|YP_001272541.1| Cytolethal distending toxin B subunit [Phage cdtI]
 gi|194433666|ref|ZP_03065942.1| cytolethal distending toxin B subunit [Shigella dysenteriae 1012]
 gi|300940434|ref|ZP_07155018.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 21-1]
 gi|416215|gb|AAD10622.1| CdtB [Escherichia coli]
 gi|49175457|gb|AAM21324.3| cytolethal distending toxin B [Escherichia coli]
 gi|121582251|dbj|BAF36043.2| cytolethal distending toxin B [Escherichia coli]
 gi|148524739|dbj|BAF63361.1| Cytolethal distending toxin B subunit [Phage cdtI]
 gi|194418095|gb|EDX34188.1| cytolethal distending toxin B subunit [Shigella dysenteriae 1012]
 gi|239793062|dbj|BAH72953.1| cytolethal distending toxin B [Escherichia coli]
 gi|239793066|dbj|BAH72956.1| cytolethal distending toxin B [Escherichia coli]
 gi|239793070|dbj|BAH72959.1| cytolethal distending toxin B [Escherichia coli]
 gi|239793074|dbj|BAH72962.1| cytolethal distending toxin B [Escherichia coli]
 gi|239793086|dbj|BAH72971.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835434|dbj|BAH78131.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835438|dbj|BAH78134.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835450|dbj|BAH78143.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835454|dbj|BAH78146.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835458|dbj|BAH78149.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835462|dbj|BAH78152.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835466|dbj|BAH78155.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835470|dbj|BAH78158.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835474|dbj|BAH78161.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835478|dbj|BAH78164.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835486|dbj|BAH78170.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835490|dbj|BAH78173.1| cytolethal distending toxin B [Escherichia coli]
 gi|239835494|dbj|BAH78176.1| cytolethal distending toxin B [Escherichia coli]
 gi|294491851|gb|ADE90607.1| cytolethal distending toxin, subunit B [Escherichia coli IHE3034]
 gi|300454775|gb|EFK18268.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 21-1]
 gi|320180627|gb|EFW55555.1| Cytolethal distending toxin subunit B [Shigella boydii ATCC 9905]
 gi|332092814|gb|EGI97882.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           dysenteriae 155-74]
 gi|742579|prf||2010282B cytolethal distending toxin
          Length = 273

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 90/305 (29%), Gaps = 50/305 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +  L+       A ++   ++ +WN+   +         +           +RQ  
Sbjct: 1   MKKLLFLLMILPGISFADLSD-FKVATWNLQGSNAPTENKWNTH-----------VRQLV 48

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVF-------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113
               A DI+ +QE G+  A A +                ++T       +         A
Sbjct: 49  TGSGAVDILMVQEAGAVPASATLTEREFSTPGIPMNEYIWNTGTNSRPQELFIYFSRVDA 108

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            A R     V  +    +          +R  + + +  +         H  +   +DS 
Sbjct: 109 FANRVNLAIVSNRRADEVIVLPP-PTVVSRPIIGIRIGND----VFFSTHALANRGVDSG 163

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
               S      ++Q   ++              IAGDFNR           + T++P   
Sbjct: 164 AIVNSV-FEFFNRQTDPIRQAANWM--------IAGDFNRSPAT------LFSTLEPGIR 208

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                        A+        +DY V+  +     +      +  +      RG+  S
Sbjct: 209 NHVNIIAPPDPTQAS-----GGVLDYAVVGNS-----VSFVLPLLRASLLFGLLRGQIAS 258

Query: 294 DHCPI 298
           DH P+
Sbjct: 259 DHFPV 263


>gi|167619815|ref|ZP_02388446.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia thailandensis Bt4]
          Length = 160

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 55/182 (30%), Gaps = 34/182 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74
           +RL+SWNI    +  G           T D       A+ L D D++ +QE+        
Sbjct: 1   MRLISWNIQWGRDANG-----------TVDLARTIDAARGLGDFDVLCMQEVTRGFHALP 49

Query: 75  --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              S +  A++         +    +                A+  +        + L  
Sbjct: 50  GGPSGDQYAELAALLPRYAVFDAIGVDLPPLGPGAPRRQFGNALATRLPVERAMRHALPW 109

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              + + +  R A+E+ +      + V+  HL+ +            S      Q   L+
Sbjct: 110 PASAAAPSMPRCALEVTLRAPFGPLRVIVTHLEYY------------SAQQRLAQVDALR 157

Query: 193 DW 194
             
Sbjct: 158 RL 159


>gi|154298761|ref|XP_001549802.1| hypothetical protein BC1G_11272 [Botryotinia fuckeliana B05.10]
 gi|150857668|gb|EDN32860.1| hypothetical protein BC1G_11272 [Botryotinia fuckeliana B05.10]
          Length = 291

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 72/273 (26%), Gaps = 27/273 (9%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAVA 81
            VR+++ NI   +E       +    R     + L     +   +  + LQE+     V 
Sbjct: 30  PVRVLTHNIRYATESP-FKGEEFWSVRCPRLCSEL--VFNSTTPETFICLQEVLHSQLVD 86

Query: 82  -----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                   P + W            +   S      A+              P       
Sbjct: 87  IHDALNEGPGSQWSYIGVGRDDGKQAGEYSPIFYRPAVWHLVLYKTFWLSETPE-KPSFG 145

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +     R     +         V+ +        ++   +   S       A+ + + + 
Sbjct: 146 WDAGSIRLLTIGIFMHRKTNEIVVMMSTHL---DNAGPISRQKS-------AEIILEKVD 195

Query: 197 QKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP-KEKDSRCNANKNLRN 253
             K +  P   ++AGDFN   +          T    D     P K++        +   
Sbjct: 196 HYKSTYTPAALLLAGDFNSPPDDEAYKTMTSSTSGMADVRDLVPVKKRYGNEMTFTSFGY 255

Query: 254 ----KIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                  ID+    ++A       +     Y++
Sbjct: 256 VDNTPTRIDFIFSSKDAPVDYGTYAVLSNRYDD 288


>gi|294945803|ref|XP_002784834.1| hypothetical protein Pmar_PMAR019309 [Perkinsus marinus ATCC 50983]
 gi|239898076|gb|EER16630.1| hypothetical protein Pmar_PMAR019309 [Perkinsus marinus ATCC 50983]
          Length = 508

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 58/185 (31%), Gaps = 9/185 (4%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             VR++S+NI         +   +   +       ++ Y +     +V LQEM    +  
Sbjct: 61  DNVRILSYNIFIRPPAPRFTHNVDDDYKDQRLEEFIKFYLQRYH--VVCLQEMFGAFSAR 118

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--KDSFSR 139
           +              ++ +  +R S   +     +  +   V  ++         D  + 
Sbjct: 119 RKRLIARARRMGFRWKVTSPQRRSSGFLVDGGCIILSRLRIVRSRAIVYQPGVFSDQLAA 178

Query: 140 AGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                A+  L+    G  I +   HL++     + E     +  +   Q   L D+I + 
Sbjct: 179 KVLSGALYALLNPAPGVFIHLFSTHLQASYSDKAGEV----AAKIRQSQIDELVDFIKKC 234

Query: 199 KESLV 203
                
Sbjct: 235 TSEEN 239



 Score = 36.1 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 17/179 (9%), Positives = 40/179 (22%), Gaps = 34/179 (18%)

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL---KDWITQKKESLVPFVIAGD 210
              I ++     +           S    L+  + + +    D + ++         + D
Sbjct: 318 KHPIVLVGDFNCNARTNPHNGVDDSDEFKLIISKLRQIGVTHDVLFEELGEHPVTYASAD 377

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           F+                     +       D         +    +DY     +A   +
Sbjct: 378 FDVTTRSS-----AGALEYTGAFVPSETALTDPIDWTGHGEQTNQSLDYIFYFPSATTNI 432

Query: 271 IQE----SFSEILYNEDDIKSRGKR----------------------LSDHCPISIDYD 303
           +      S S      +      +R                      LSDH  + ++  
Sbjct: 433 VDNKATPSVSVKSAKVNSFHLTQRRGERLYALSQATNDPLQEFGFTQLSDHYGVEVELS 491


>gi|260771675|ref|ZP_05880594.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14]
 gi|260613259|gb|EEX38459.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14]
          Length = 265

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 73/278 (26%), Gaps = 47/278 (16%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMG--------------SYNAVAKVFPKNTWCIFY 93
           ++      ++ Q       D+V LQE+               ++  +A  +         
Sbjct: 11  EKQLEKLDVVAQAIIEQGCDVVALQEVNQHQNSPAVDSNILTNHTVLADNYGYLLQKKLM 70

Query: 94  STERLINHSKRDSNNDIHT---AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150
                   +    +         +A   +   V  +   L    D       R AV + V
Sbjct: 71  EYGYHYQLTWDFVHQSYDVYQEGLAFLTRLPIVEHEVIDLSDNYDVNFWKHRR-AVRIKV 129

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
                   + + H   +   +S              Q   +K  ++ +        + GD
Sbjct: 130 TSQRGDFNLYNCHCGWWSDSESSFED----------QFNRIKATLSTELS-----FLLGD 174

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQN 265
           FN   +      D+       D       +          +  +     + ID  + +Q 
Sbjct: 175 FNNPSHIRNEGYDYVLQCGLIDCYEIAEIKDSGTTVIKNIDGWEQNSQALRIDLVLSNQP 234

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 Q  F+   Y           +SDH  + ++ D
Sbjct: 235 MVVKQHQVIFNNDFYPV---------VSDHFGVLVEVD 263


>gi|291233633|ref|XP_002736757.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus
            kowalevskii]
          Length = 1571

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 86/334 (25%), Gaps = 60/334 (17%)

Query: 18   ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGS 76
             + A   + +++N+  L      S  +    R       L Q      D D +   E   
Sbjct: 1211 PTPATTFKTLAYNVYELRYLIWQSGQRERTCRI------LTQIFTRHGDLDAIIFNEAFM 1264

Query: 77   ----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                    A       +  F      +         +    IA R   +R  ++ Y    
Sbjct: 1265 GGCFPQHGASFRQIMEYYGFRYFTGTVGVGLILPPENGGVFIASRWPILRWDERVYENTI 1324

Query: 133  AKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                   +  + A+   +E       +K  VL  HL +                 L+Q  
Sbjct: 1325 VLTDDWMSA-KGAIYAEIEKTVDGETRKYHVLGTHLHAGDGNRGG------DEVRLNQSI 1377

Query: 189  QWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDPNDSL 234
            +  K  + Q        +  GDFN                          +  +  +   
Sbjct: 1378 EMHKLMLRQNVSMDEAVIYGGDFNTDYYTDQEWLQRMLVALESTLPERMGYINVTSDKQY 1437

Query: 235  IRFPKEKDS-RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE-------DDIK 286
                ++ +      + +      ID+ V   +    +     S     +       DD+K
Sbjct: 1438 NDIHRDPEDIEVGDDPDWVPGSWIDFVVYSHSHLVPVTSSQESVKYVADTPFTVCMDDVK 1497

Query: 287  SRGKR----------------LSDHCPISIDYDF 304
              G+                 LSDH  +   +D+
Sbjct: 1498 LFGRHIYPYSSNCGETQTITDLSDHYAVLGRFDY 1531



 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/364 (11%), Positives = 93/364 (25%), Gaps = 95/364 (26%)

Query: 21   AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            A  ++++++N+  L      S       R       L       D D++   E       
Sbjct: 781  ATTLKVLAYNVWKLRYLYYQSGQYERTCRIPQKIFELYN-----DVDVIVFNEAFMGGCF 835

Query: 81   AKV---------------------------FPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            ++                                 +   Y T  L   +++      +  
Sbjct: 836  SEQHLPIEIPIDIPIIPQPIPLRLGGCSFRQMLTQYGFQYFTNTLGQDTRQLLPKIENGG 895

Query: 114  IAVRKKNVRVLQQSYPLLGA-KDSFSRAGNRRAVELLVEIN----GKKIWVLDIHLKSFC 168
            + +  +               + S     ++ AV   +E N     ++  V+  HL++  
Sbjct: 896  VFIASRWPINSTNEVIFGNTVRPSPDMVSSKGAVYANIEKNVESVTRRYHVIGTHLQASF 955

Query: 169  FLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKIN-YLGNNDDFWK 226
                         S+ + QA+ ++ ++  Q      P + AGD N  ++   G  D   +
Sbjct: 956  G--------EAGNSVRALQAKEMQLFMESQHIPEDEPVIYAGDLNTDLHGSDGRWDQMLQ 1007

Query: 227  TIDPNDS--------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ-------------- 264
             ++ +             +           +       IDY +                 
Sbjct: 1008 ILEADMPEIVGDLNITYDYENNDVRGEGGTQTGGKW--IDYVIYSNQHIMPNSATQEAIK 1065

Query: 265  -----------------------NAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISI 300
                                         ++       Y ++ +       LSDH  +  
Sbjct: 1066 FVADEPFPVCMRALPIQLVDPDDGLIPLPLEVGQHRYPYQDECLDWWDITDLSDHYAVLG 1125

Query: 301  DYDF 304
             +DF
Sbjct: 1126 TFDF 1129


>gi|307200674|gb|EFN80777.1| Protein angel-like protein 2 [Harpegnathos saltator]
          Length = 475

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 62/204 (30%), Gaps = 11/204 (5%)

Query: 23  KVRLVSWNI---NTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
            +RL S+NI   N L     +    +       +   L+ Q     +A+I+ LQE+   +
Sbjct: 87  TLRLFSFNILAQNLLDTHSYLYQEHDPAALSWKNRKPLVLQEILEAEANIICLQEVLKDH 146

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +  V P      F        + KR ++      +  R     +L  +   L       
Sbjct: 147 LLDFVAP------FLELGYEYLYKKRTNDKKDGLLLLYRGDQFTLLDYAKVELHQSGIEV 200

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   +   + +       + +      +     +       LL  + + +      +
Sbjct: 201 LNRDNVGIIAKLSLRDNPETQIVVATTHLLYNPRRNDVRLAQTQLLLAEIERIAFIENTQ 260

Query: 199 KESLV-PFVIAGDFNRKINYLGNN 221
                 P ++AGDFN         
Sbjct: 261 TGPRYLPIILAGDFNLTPFSAVYK 284


>gi|114572548|ref|XP_001170966.1| PREDICTED: protein angel homolog 2 isoform 1 [Pan troglodytes]
 gi|332811906|ref|XP_003308793.1| PREDICTED: protein angel homolog 2 [Pan troglodytes]
          Length = 418

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 40  DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 99

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +       D   
Sbjct: 100 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISL 154

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      + C  ++          +   Q   L   I+  
Sbjct: 155 LDRDNVGLVLLLQPK-----IPYAACPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 209

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 210 AHQKDGSFCPIVMCGDFNSVPGSPLY 235


>gi|312601527|gb|ADQ90782.1| Membrane nuclease, lipoprotein [Mycoplasma hyopneumoniae 168]
          Length = 377

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 83/319 (26%), Gaps = 50/319 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R+  WN+   S          S K  T+    + Q   +   D+V L E+      +
Sbjct: 65  NSIRIGFWNVLNYS--------NKSSKTNTAKTYAISQVINSTKLDLVGLAEITQTGNGS 116

Query: 82  KVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  +       +  + I  ++    N         +   + +   + P           
Sbjct: 117 DIVKELNTLNPNAAWKEITTAEEGKVNQKEKYTFLYKSSLLEIANFASPSNPYLIQKGVK 176

Query: 141 --GNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW- 194
               R    +         +    +  H  +     +         S  SQ+A   +D  
Sbjct: 177 LEWARPLAAVKFNTKTEKKEDFTFVIGHFDAPGVQKNRGEIQDKETSQGSQEAAEARDLI 236

Query: 195 -----ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                I +K       +   D N +         F  T++   SL+   ++      +N 
Sbjct: 237 NLLVEIDKKDGENKEIIFMADTNIRAENSE--KLFKSTLNSYRSLLDKEEKTSL---SNT 291

Query: 250 NLRNKIPIDYFVMDQNA----------YKFLIQESFSEILYNEDDIKSRGKR-------- 291
             +     D      N           +    +   +   Y+E   K             
Sbjct: 292 FGKYSNSYDKIFYKGNLVANKGQKFDIFSIFKKNIANVEKYDELRKKDGRSMNYKINQLG 351

Query: 292 -------LSDHCPISIDYD 303
                  +SDH  +  D +
Sbjct: 352 EINRIKGISDHTMVYFDLE 370


>gi|290562521|gb|ADD38656.1| TRAF and TNF receptor-associated protein [Lepeophtheirus salmonis]
          Length = 346

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 77/288 (26%), Gaps = 44/288 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
               LV+WN++ LS                     + +  ++   DIVFLQE+       
Sbjct: 91  GDFSLVTWNVDGLSRAN-----------LKVRVKAVCKIIEDTKVDIVFLQEVIPLT--- 136

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +        +      +     +  +   ++    +     +           
Sbjct: 137 -----LNYFKEKLGNYIFVVGNEEDERLEYFNVICLRRFRIYMDSFQIIPY----NYSVM 187

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  + +   I   K+ +++ HL+S               +   +Q +     I +    
Sbjct: 188 GRNLLFVEAHIGKAKLILMNTHLEST----------KDHATTRIEQLKKCISIINKSASK 237

Query: 202 LVPFVIAGDFNRK----INYLGNNDDFWKTIDPND---SLIRFPKEKDSRCNANKNLRNK 254
               +  GD N +     +   N  D W                +  +         + +
Sbjct: 238 ETTVIFGGDLNIRDKELTSLPPNFHDLWIANGSKKECNYTWDMTRNTNLEFPGR--FKPR 295

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  D   +  N    +  + F  I    + I       SDH  I   +
Sbjct: 296 LRFDRLYIKYNENYDVKSDFFGLIG--IEKISGTQSFPSDHWGILTRF 341


>gi|294155687|ref|YP_003560071.1| putative membrane nuclease, lipoprotein [Mycoplasma crocodyli
           MP145]
 gi|291600392|gb|ADE19888.1| putative membrane nuclease, lipoprotein [Mycoplasma crocodyli
           MP145]
          Length = 687

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/377 (13%), Positives = 103/377 (27%), Gaps = 87/377 (23%)

Query: 1   MIRKYVLAL-VFFLVPCTAS--------VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           +I+K ++   +F + P T            +++++  WN+     +              
Sbjct: 320 IIKKEIIGFKIFTVDPTTPPIIPINPTTSKKELKVGHWNVLNFGSKNLNIDSP------- 372

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNA------VAKVFPKNT---WCIFYSTERLINHS 102
                L    KN + D++ L E+    A      +  +  K+    W   +      + S
Sbjct: 373 -KVYALANIIKNANFDLIGLTEINYDAADSVKLIIDYLNNKDKISKWNYVFQPIDQASLS 431

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQ-----------QSYPLLGAKDSFSRAGNRRAVELLVE 151
             ++N     AI  +                    S+  +   +         A    + 
Sbjct: 432 NSNTNTKEQVAIVYKSSIFEPKSFNNNKMGDSYAGSFKGIKTSNILMYKRPLYAHNFNLI 491

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL--------------LSQQAQWLKDWITQ 197
              K    +  H  S  +   +E +   S                  + +A  L D +  
Sbjct: 492 GLNKSFTFVFGHFDSPGYKSGVEQSSGKSFEYDNVSYSLATSQGEFEAFEAIRLNDALKY 551

Query: 198 K--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251
               +     +  GD N K      N+D +K+ + N   + +   K +      +L    
Sbjct: 552 FDSIDGDSTILFGGDTNIKYG----NNDLFKSAEKNGYELLYGDSKSNDQKYATSLKSRD 607

Query: 252 -RNKIPIDYFVMDQNAYKFLIQES-------------------------FSEILYNEDDI 285
                P D  +  +     +I E                             I    D  
Sbjct: 608 LGYSEPYDKILFKEAVGVDIISEKENATLDFKIDIINAFNNNLIDKNEFIKMIDTKYDTD 667

Query: 286 KSRGKRLSDHCPISIDY 302
             + + +SDH P+    
Sbjct: 668 IKKIRFISDHAPVFAKI 684


>gi|163739028|ref|ZP_02146441.1| possible endonuclease/exonuclease/phosphatase family protein
           [Phaeobacter gallaeciensis BS107]
 gi|161387833|gb|EDQ12189.1| possible endonuclease/exonuclease/phosphatase family protein
           [Phaeobacter gallaeciensis BS107]
          Length = 400

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 100/348 (28%), Gaps = 75/348 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + S+N+  L   +       S   +        +      LDADIV  QE+     +
Sbjct: 3   EFTIASFNVKNLIGPDQEYYKFQSYTPEEYAWKADWMADQLLTLDADIVGFQEIFEEAPL 62

Query: 81  AKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHT----------------------- 112
            ++  +       +      +R   + ++     +                         
Sbjct: 63  REIIAETDRRGHEANAASLPDRSKRYHRKAIFRKLAYTPYTEAELAFAPNINDSKTPGKR 122

Query: 113 --AIAVRKKN----VRVLQQSYPLL------------GAKDSFSRAGNRRAVELLVEING 154
              +A+  +        + Q  P               A     R  +R  ++  + + G
Sbjct: 123 RPGLAILSRYGFAEPVEIIQDLPQPLDIPMACLGGEDDAGYYTLRRLSRPIMKARIPVAG 182

Query: 155 KKIWVLDIHLKSF--------------------CFLDSLENTYSPSCSLLSQQAQWLKDW 194
           + + V + HLKS                                 +      +A  L+  
Sbjct: 183 QIVSVFNCHLKSKLGEFITPQGAPYPPETVLTAYDAGGRALGALRAALRRMAEAWVLRRM 242

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--NLR 252
           I  + E   P ++ GDFN   N + +     +T   N S +     + S    +   + +
Sbjct: 243 ILDELEQNRPVMVLGDFNDGENAVSSEIISGETPFRNYSWMLRHDARHSGDRYSAEEDQQ 302

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----RLSDHC 296
            +  ID F +     +FL  +S  +++Y               +S H 
Sbjct: 303 IRETIDKFQLRSAEKQFLK-KSLRDVVYTTAFGGVHESIDQIYMSRHF 349


>gi|227517879|ref|ZP_03947928.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0104]
 gi|227074633|gb|EEI12596.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0104]
          Length = 274

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFY------- 93
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPVATQTPVHEDNFAYLIVQYLAEK 82

Query: 94  -STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQHYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLATGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|156056543|ref|XP_001594195.1| hypothetical protein SS1G_04002 [Sclerotinia sclerotiorum 1980]
 gi|154701788|gb|EDO01527.1| hypothetical protein SS1G_04002 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 501

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/295 (9%), Positives = 65/295 (22%), Gaps = 70/295 (23%)

Query: 67  DIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           DI+ +QE  +   +    +   + W +F+S  +    +S             +R +    
Sbjct: 12  DILVMQETKIQRKDLRDDMVLVSGWDVFFSLPKHKKGYSGVAIYTRNSVCAPIRAEEGIT 71

Query: 124 LQQSYPLLGAKDSFSRAGNRRA------------VELLVEINGKKIWVLDIHLKSFCFLD 171
              + P             +              ++ +   +  +  +L+        + 
Sbjct: 72  GVLTPPNSTTSFRDLPKDQQIGGYPTNAQLQGYFLDAMTLDSEGRCVILEFPAFILIGVY 131

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------------- 216
              N               L   I          ++ GD N   +               
Sbjct: 132 CPANRDETRDEFRLAFLNALDTRIRNLVALGKSVLLVGDLNVIGDEIDTANLEEQLKKQK 191

Query: 217 -------YLGNNDDFWKTI--------DPNDSLIRFPKEKDSRCNANKNL---------- 251
                         F   +               +   +     +  +            
Sbjct: 192 LTLNEYISTPARRLFNHLLIGGKVVGERDEGREPQVMWDVCRGFHPARKKMFTCWEQKKN 251

Query: 252 ----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    IDY +  ++  ++  + +              G   SDHCP+    
Sbjct: 252 ARPGNFGSRIDYILCSEDRKEWFQESNIQ-----------EGLMGSDHCPVFATL 295


>gi|302797160|ref|XP_002980341.1| hypothetical protein SELMODRAFT_112184 [Selaginella moellendorffii]
 gi|300151957|gb|EFJ18601.1| hypothetical protein SELMODRAFT_112184 [Selaginella moellendorffii]
          Length = 265

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 70/293 (23%), Gaps = 44/293 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +  +++N+    E   +                + +  +     ++  QE+    ++  
Sbjct: 1   SIVFMTYNV-WFREDLEL----------ERRMEAIGELIRQHQPHVICFQEV--TTSIYA 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F ++ W   +S  R    S+  +            K         P             
Sbjct: 48  IFQRSNW---WSGYRCSVSSELAA--KRAYFCIQLSKLPIDKFYRNPFHNT------IMG 96

Query: 143 RRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R      ++     ++ V   HL+S C   +         +    Q +     +      
Sbjct: 97  RELCLADIDCGNSTQLVVATTHLESPCP--APPKFDQMFSAERVAQMKEALATLKPLPN- 153

Query: 202 LVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
               V  GD N      G     N                  +  +      +   K  +
Sbjct: 154 ---VVFGGDMNWDDKLDGQPPLENGWMDAWTQLRAKEPGLTYDAKANPMLTGSRLQK-RL 209

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------LSDHCPISIDY 302
           D        ++    E            +   K+         SDH  + +  
Sbjct: 210 DRVFYHFRDFEVESIEMIGTKPIPGLTFEKETKKSLLKLPVLPSDHFGLVLKI 262


>gi|305667498|ref|YP_003863785.1| hypothetical protein FB2170_14663 [Maribacter sp. HTCC2170]
 gi|88709546|gb|EAR01779.1| hypothetical protein FB2170_14663 [Maribacter sp. HTCC2170]
          Length = 602

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/283 (11%), Positives = 72/283 (25%), Gaps = 52/283 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +   +  WNI                 R       + +  K  + D++ +QE  S     
Sbjct: 369 KDYTVGVWNIWHGGIH-WSMDKDGWDSRM-----RIVEIIKEKNLDVILMQETYSNGDF- 421

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  +  +    +++    +   + +                +   YP+   + S     
Sbjct: 422 -IAAELGYYFATTSDWDYKYQGANIS----------------VISRYPITELQVSEETEF 464

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           N  AV+L +    ++IW +        F    +   S   +                   
Sbjct: 465 NNVAVKLKIS-ETQEIWAMSNWYGMSNFNKVFDYNKSRFDN-----------------SD 506

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYF 260
            +P    GDFN   +  G  +   + +        +         +     ++ + ID  
Sbjct: 507 SIPVFFGGDFNAVPHEDGGENLASEKMLVEGFTDAYRSLYPDVEKHPGFTHQSDVRIDQL 566

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +                   SDH  I   ++
Sbjct: 567 YYKGRGLMNTSTKVI---------STWPSGFPSDHFLIVSKFE 600


>gi|23008040|ref|ZP_00049649.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 237

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/272 (11%), Positives = 60/272 (22%), Gaps = 61/272 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             VRL +WNIN                   +       + +    D++ LQE    +A  
Sbjct: 2   GPVRLATWNIN----------------SVRARVDRAVAFLERTGTDVLALQETKCTDA-- 43

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +      +       +    +AV  +   +        G      +  
Sbjct: 44  --------QFPVAPFEAAGYEVAHVGVNQWNGVAVVSRVG-LDDVETSFPGQPAFGDKVE 94

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKE 200
            R      +      + V  +++     +      Y       L  QA     W+    +
Sbjct: 95  ARA-----LGATCGGVRVWSLYVPHGREVGDPHYAYKLRWLDELRAQA---AGWLA--AD 144

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSRCN 246
                 + GD+N         D  +                           +E      
Sbjct: 145 PAAQVALVGDWNVAPLDTDVWDVAYFAGKTHVTPAERDAFAAFGAAGYTEVTREAIPAER 204

Query: 247 ANKNLRN---------KIPIDYFVMDQNAYKF 269
                            + ID+  +   A+  
Sbjct: 205 TYTYWDYQRLRFPRNEGMRIDFAYLSPAAHAR 236


>gi|316997319|dbj|BAJ52767.1| cytolethal distending toxin B [Campylobacter lari]
          Length = 268

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 83/306 (27%), Gaps = 52/306 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +L +  +     A   +   + +WN+   S         +           +RQ  
Sbjct: 1   MKKILLFIFIYSFSFGAL--EDYNVGTWNLQGSSAATESKWNVS-----------IRQLI 47

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              +  D++ +QE G+  + A + P+    +              S++  ++      + 
Sbjct: 48  SGENPLDVLAVQEAGTLPSTAVMTPRQVQPVGVGIPIHEYEWNLGSSSRPNSVFIYYSRV 107

Query: 121 VR--------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
                     ++ +               +R  + + +   G  ++     L +      
Sbjct: 108 DVGANRVNMAIVSRVQADEVIVLPPPTVASRPIIGIRI---GNDVFFSIHALATGGNDAG 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
              +          Q  W+               I GDFNR              + P  
Sbjct: 165 AIVSAVDMHFRNMPQVNWM---------------IMGDFNRAPGD----------LVPLL 199

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                 +       ++     +  IDY V   +    L       IL        R    
Sbjct: 200 DADLRSRINIVAPYSSTQTSGRRVIDYAVTGNSNQSTLYTPP--SILAILAAAGLRSFLA 257

Query: 293 SDHCPI 298
           SDH P+
Sbjct: 258 SDHFPV 263


>gi|290995827|ref|XP_002680484.1| phosphatase [Naegleria gruberi]
 gi|284094105|gb|EFC47740.1| phosphatase [Naegleria gruberi]
          Length = 310

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 90/333 (27%), Gaps = 74/333 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P        +   S+N++  S   G            S+ T L +Y    + DIV L E+
Sbjct: 9   PPPPESNNLLSCCSFNVHHFSTAYG-----------RSNLTELYKYLHKNNFDIVCLNEV 57

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +  +       + +  S    +  ++        T          ++   YP+L  +
Sbjct: 58  YEDSEYSHPLRDLVYALNSSLPEEVEVARPYQYRSGPTNYESN-----IILSKYPILFQE 112

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                 G R  + + ++    +   +          +          S +       +  
Sbjct: 113 KKDVGRGERSVLGIKIDHPLVRNVFVTHLDH--VSENKRVLQLKRVLSFMKHFID--RKL 168

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI----------------------DPND 232
           +    +    F++ GDFN  +      D FW  +                      +P  
Sbjct: 169 VDYPNDENKNFILLGDFN-SMRMDDYTDKFWDYLIKQRIQYGWEAPDTQVTSLLFNEPTT 227

Query: 233 SLIRFPKEKDSR---------------------CNANKNLRNKIPIDYFVMDQNAYKFLI 271
                 +E D                            + R    IDY + +     +L 
Sbjct: 228 PESHSTEEADEPKLKMPLVDCWKVLNPDIIFEGEKGTGSSRLDTRIDYVISNTELQPYLK 287

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Q              S    +SDH P+ + ++F
Sbjct: 288 QSWID----------SDASGISDHLPVVVLFEF 310


>gi|226292203|gb|EEH47623.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides
           brasiliensis Pb18]
          Length = 521

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/344 (11%), Positives = 72/344 (20%), Gaps = 80/344 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN 78
            +K+ +++ N   L         K   K        + +     +    IV LQE  +  
Sbjct: 10  PEKISILTLNCWGL---------KFLSKYRRERLLEIGKRIAGSNNPPHIVGLQECWTQE 60

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GA 133
               +  +    + Y                    +A+  K        +         A
Sbjct: 61  DYNNIRRETQEILPYGKFYYSGIFGG--------GLAILSKWPIEESTMFAYPLNGRPTA 112

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    +      + I      + D+           E   S  C   + QA  +  
Sbjct: 113 FFRGDWFVGKGVACARIRIGPASTDIADVFCTHLHAPYEREPHDSYIC-HRTAQAWEIVK 171

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPN-------------- 231
            +    E     +  GDFN     L +          D W  + P+              
Sbjct: 172 LMRAAAEKGHLVIGLGDFNMLPQSLAHRLITSHAPVKDVWSHLHPDSSIGAAIDAAEMAR 231

Query: 232 -------DSLIRFPKEKDSRCNANKNLRNKI----------------------PIDYFVM 262
                  D  +                                           +DY  +
Sbjct: 232 KKPIPSADFNVLENGATCDGIFNTWRWNKTQQNRLKREGNIVVDGELPDPLAKRLDYIYV 291

Query: 263 DQNAYKFLIQESFSEILYNE----DDIKSRGKRLSDHCPISIDY 302
              A+          I        +   +    LSDH  +    
Sbjct: 292 GDGAFGQFSSPKKWTISSARVGMMERHPTLHCSLSDHFSVEATI 335


>gi|225681096|gb|EEH19380.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides
           brasiliensis Pb03]
          Length = 521

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/344 (11%), Positives = 72/344 (20%), Gaps = 80/344 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN 78
            +K+ +++ N   L         K   K        + +     +    IV LQE  +  
Sbjct: 10  PEKISILTLNCWGL---------KFLSKYRRERLLEIGKRIAGSNNPPHIVGLQECWTQE 60

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GA 133
               +  +    + Y                    +A+  K        +         A
Sbjct: 61  DYNNIRRETQEILPYGKFYYSGIFGG--------GLAILSKWPIEESTMFAYPLNGRPTA 112

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    +      + I      + D+           E   S  C   + QA  +  
Sbjct: 113 FFRGDWFVGKGVACARIRIGPASTDIADVFCTHLHAPYEREPHDSYIC-HRTAQAWEIVK 171

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPN-------------- 231
            +    E     +  GDFN     L +          D W  + P+              
Sbjct: 172 LMRAAAEKGHLVIGLGDFNMLPQSLAHRLITSHAPVKDVWSHLHPDSSIGAAIDAAEMAR 231

Query: 232 -------DSLIRFPKEKDSRCNANKNLRNKI----------------------PIDYFVM 262
                  D  +                                           +DY  +
Sbjct: 232 KKPIPSADFNVLENGATCDGIFNTWRWNKTQQNRLKREGNIVVDGELPDPLAKRLDYIYV 291

Query: 263 DQNAYKFLIQESFSEILYNE----DDIKSRGKRLSDHCPISIDY 302
              A+          I        +   +    LSDH  +    
Sbjct: 292 GDGAFGQFSSPKKWTISSARVGMMERHPTLHCSLSDHFSVEATI 335


>gi|219111411|ref|XP_002177457.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411992|gb|EEC51920.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 409

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 74/225 (32%), Gaps = 23/225 (10%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNI--------NTLSEQEGVSLWKNSVKRTTS 52
           M+  ++L    F     A  A  + ++S+NI            +     L ++    ++ 
Sbjct: 1   MVVPHILGPSAFPTVPMAPPAACLSVLSYNILLPNSMDGWWNYKMYSPPLPESKQHVSSW 60

Query: 53  DYTL--LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
           ++    LR+    +DADIV LQE+   +          +   +   R + +  ++     
Sbjct: 61  NFRKDLLRERIATVDADIVCLQEVSPVS----------FDTDFDFMRELGYDGKEMFKKG 110

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
               A   K  R    + P+   +   +         +         ++L+ HL++    
Sbjct: 111 RFRPATFWKTSRCEIVTPPVHKDRTLLTAFRVLPPPTVSDPAETHVWYILNCHLQAGKEG 170

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
                        +   A+ LK       E    F++ GDFN   
Sbjct: 171 GRRVRQIHEGARSVLTLARKLKQ---PNPEQCTAFIVCGDFNGGP 212


>gi|212533215|ref|XP_002146764.1| sphingomyelinase family protein, putative [Penicillium marneffei
           ATCC 18224]
 gi|210072128|gb|EEA26217.1| sphingomyelinase family protein, putative [Penicillium marneffei
           ATCC 18224]
          Length = 498

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/344 (10%), Positives = 78/344 (22%), Gaps = 76/344 (22%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              ++R+++ N   L       L K   +R +     +     +    IV LQE  +   
Sbjct: 7   SPTRIRILTLNCWGL-----KYLSKFRRERMSEIGRQIA--IADDPPQIVGLQECWTQED 59

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAK 134
              +  +    + Y                    +A+  K        +         A 
Sbjct: 60  YKSIRKQTKHILPYGKFYYSGVFGG--------GLAILSKWPIEESSMFAYPLNGRPTAF 111

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   +      + +  +   + ++           +  +       + QA  +   
Sbjct: 112 FRGDWYVGKGVACARIRMGPRAGDIAEVFCTHLHAP-YEQEPHDSYLCHRTAQAWEISKL 170

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEK----- 241
           + +  E     +  GDFN       +          D W+ + P+ S+            
Sbjct: 171 MRRAAERGHLVIGLGDFNMVPMSFAHRLITAHAPVKDVWRHLHPDSSIGAANSAAEMKRG 230

Query: 242 -----------------DSRCNANKN---------------------LRNKIPIDYFVMD 263
                            D   N  +                        +   +DY  + 
Sbjct: 231 KPIPSADFNITENGAASDGPFNTWRWSKEQQKRLFKGEDTFIDGNQPDPDGRRLDYIFVG 290

Query: 264 QNAYKFLIQESFSEILYN----EDDIKSRGKRLSDHCPISIDYD 303
              Y      +   I            +    LSDH  I     
Sbjct: 291 DGGYPPSFPAAQWNIQAAWVSMMQRHPTLKVSLSDHFGIETVIT 334


>gi|183602104|ref|ZP_02963472.1| hypothetical protein BIFLAC_07617 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683016|ref|YP_002469399.1| endonuclease/exonuclease/phosphatase [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|241191336|ref|YP_002968730.1| hypothetical protein Balac_1318 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241196742|ref|YP_002970297.1| hypothetical protein Balat_1318 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218597|gb|EDT89240.1| hypothetical protein BIFLAC_07617 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219620666|gb|ACL28823.1| endonuclease/exonuclease/phosphatase [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|240249728|gb|ACS46668.1| hypothetical protein Balac_1318 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251296|gb|ACS48235.1| hypothetical protein Balat_1318 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|289177461|gb|ADC84707.1| Hypothetical membrane spanning protein [Bifidobacterium animalis
           subsp. lactis BB-12]
 gi|295794329|gb|ADG33864.1| hypothetical protein BalV_1276 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 341

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/300 (8%), Positives = 77/300 (25%), Gaps = 68/300 (22%)

Query: 14  VPCTASVAQKV----------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           +  +A  +Q +          RL++ N+                 +  +D   +    ++
Sbjct: 94  LSGSALSSQSLPRADTADAVARLMTCNVY----------------KGHADAAAIVNAVRD 137

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
              +++ LQE  + + + ++          +    +    + S+ D +   A+       
Sbjct: 138 NHVEVLALQET-TPDFLKRL--------EEAGISQLLPYSQTSSADGYFGNALFSALPFE 188

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                 +                 +  +     +  + +H +S                 
Sbjct: 189 NPSQTDVDSIASYMPGG------TVGFDNGAIPVRFVSVHTQSPTEG------------R 230

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             + ++ + +     +     +++ GDFN   ++    D           +         
Sbjct: 231 FEKWSRSIAELKQLNEHPDTDYILMGDFNSTWDHAVFRDMLGTRFQDAAEVSGHGLVFTW 290

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +          ID+ V  ++     +                     SDH  +    D
Sbjct: 291 PADRKYLPAFAG-IDHIVTSKDVTIGQVNS--------------LTIPGSDHRALLATVD 335


>gi|14277798|pdb|1I9Y|A Chain A, Crystal Structure Of Inositol Polyphosphate 5-Phosphatase
           Domain (Ipp5c) Of Spsynaptojanin
 gi|14277799|pdb|1I9Z|A Chain A, Crystal Structure Of Inositol Polyphosphate 5-Phosphatase
           Domain (Ipp5c) Of Spsynaptojanin In Complex With
           Inositol (1,4)-Bisphosphate And Calcium Ion
          Length = 347

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 81/311 (26%), Gaps = 58/311 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLDADIVFLQEMGSYNAVAKVF 84
           + S+N+N  S    +  W        +D  ++  Q    L       Q++ S +   +  
Sbjct: 29  VASYNLNGCSATTKLENWLFPENTPLADIYVVGFQEIVQLTP-----QQVISADPAKRRE 83

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++      + +           +         I  ++  +  ++     +        +
Sbjct: 84  WESCVKRLLNGKCTSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKKTGLGGVS 143

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+ AV +  +     +  +  HL +        +            A  L+    +   
Sbjct: 144 GNKGAVAIRFDYEDTGLCFITSHLAAGYTNYDERDHD------YRTIASGLRFRRGRSIF 197

Query: 201 SLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIRFPKEKDSR 244
           +    V  GDFN +I+                     D   K +        F +   + 
Sbjct: 198 NHDYVVWFGDFNYRISLTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVFPFFSELPITF 257

Query: 245 CNANKN------------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               K              R     D  +         +  S+  +              
Sbjct: 258 PPTYKFDIGTDIYDTSDKHRVPAWTDRILYRGEL----VPHSYQSVPL----------YY 303

Query: 293 SDHCPISIDYD 303
           SDH PI   Y+
Sbjct: 304 SDHRPIYATYE 314


>gi|256617827|ref|ZP_05474673.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis ATCC
           4200]
 gi|257089369|ref|ZP_05583730.1| predicted protein [Enterococcus faecalis CH188]
 gi|312904520|ref|ZP_07763679.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0635]
 gi|256597354|gb|EEU16530.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis ATCC
           4200]
 gi|256998181|gb|EEU84701.1| predicted protein [Enterococcus faecalis CH188]
 gi|310632218|gb|EFQ15501.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0635]
 gi|315577258|gb|EFU89449.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0630]
          Length = 274

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFYST----- 95
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPVATQTPVHEDNFAYLIVQYLAEK 82

Query: 96  ---ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQNYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLATGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|290971357|ref|XP_002668476.1| predicted protein [Naegleria gruberi]
 gi|284081901|gb|EFC35732.1| predicted protein [Naegleria gruberi]
          Length = 418

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 91/312 (29%), Gaps = 55/312 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +++++++ N    +  +         +R T          KNL+ DI+ LQE+     +
Sbjct: 128 PKELKIITLNTWFANILQD--------QRYTEQL----NVFKNLNVDIICLQEVIPLYVI 175

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +   +    F     +I+    +S +     I ++K    +  +   L          
Sbjct: 176 DFITKND----FIKNNYIISDIDGNSIDPYGVMILIKKNLPILDIKINKLTT-------R 224

Query: 141 GNRRAVELLVEINGKKIWVLDIHL-------------------KSFCFLDSLENTYSPSC 181
             R  +      N   + +   +L                    ++  + ++      S 
Sbjct: 225 MGRCLINCTFAKNIPNLDIYLKYLNSINNNDINSNIEELEKLIPTYAIIGTVHLESLSSK 284

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK-E 240
                Q   +     Q   +    ++ GDFN   + + N+            +  +    
Sbjct: 285 ERRHVQLNEIYSIYNQY-PNTEIKMLMGDFNFDSSSIENDQLLTGNYKDYKDIWYYLYPN 343

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQN----------AYKFLIQESFSEILYNEDDIKSRGK 290
            + +    +N R    +D  +++              + LI     ++   +        
Sbjct: 344 IEGKTFLYQNNRKGQRLDRILLNSKNYIPKEIKIIGNEKLILNEQDQLKLKQSFSLDYTC 403

Query: 291 RLSDHCPISIDY 302
             SDH  +  + 
Sbjct: 404 M-SDHFGLYSEI 414


>gi|148927868|ref|ZP_01811284.1| Endonuclease/exonuclease/phosphatase [candidate division TM7
           genomosp. GTL1]
 gi|147886783|gb|EDK72337.1| Endonuclease/exonuclease/phosphatase [candidate division TM7
           genomosp. GTL1]
          Length = 248

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/261 (11%), Positives = 68/261 (26%), Gaps = 44/261 (16%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-------N 107
             +         DI+ LQE+ S N V  +FP                S            
Sbjct: 15  KQVLDLIAKEQPDILCLQEICSSNYVPPLFPGFAGFEAIQAALPDYESHFAPCFSSPLFG 74

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL------VEINGKKIWVLD 161
           +      A+  +      +   + G         +R    +       V+    +  +++
Sbjct: 75  STCSFGNAIFSRFPLADTEIIFINGQYQEGVELFDRNTTNIRNLQRTAVKTPEGEFCLIN 134

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
               +F   + + +  S          + ++      K S  P V +GD N         
Sbjct: 135 --HHAFWVPNEMGSQES---------VEKMQRTADVIKSSPRPLVFSGDLNVVSKSPAMK 183

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                 +          +       +       +P D+  + +                 
Sbjct: 184 S-IHALLRD-----LTEEYNIPTTLSGFGKVPNVPCDHICVSEGI--------------Q 223

Query: 282 EDDIKSRGKRLSDHCPISIDY 302
                ++   +SDH  +++++
Sbjct: 224 IQKFGAKQDIVSDHLALTLEF 244


>gi|84995422|ref|XP_952433.1| hypothetical protein [Theileria annulata strain Ankara]
 gi|65302594|emb|CAI74701.1| hypothetical protein, conserved [Theileria annulata]
          Length = 707

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/355 (12%), Positives = 88/355 (24%), Gaps = 83/355 (23%)

Query: 25  RLVSWNIN---TLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMGSY 77
           R+VS+NI     L+  +  S +         DY     L+ +    LD DI+ LQE    
Sbjct: 359 RVVSFNILSPTYLTSSDPSSTFFPYCPGEYLDYNYRNQLIGREINYLDPDILCLQEC--- 415

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDS 136
              ++    +     + T+     + +  N     A  A R +   +            S
Sbjct: 416 ---SRKVYNDYLKFLFDTKYHSWLTVKGGNAGEGCAIFAKRSQFTPLELHDMYFKDIVKS 472

Query: 137 FSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ------QAQ 189
                    +    +  +           +  C+ +   N Y    +            +
Sbjct: 473 DEYKPITDKLCTKWLLYSENYFDKYHTVFQFGCYRNKRNNKYLFVANTHLYFHPMAGHIR 532

Query: 190 WLKDWITQKK----------------ESLVPFVIAGDFNRKINYLGNN------------ 221
            L+ ++   +                 S    ++ GDFN   N    N            
Sbjct: 533 LLQTYVMLNELEKFKIKAADKHGFDVNSDSYTLMCGDFNSFPNESIYNLIVTGHVSYNHP 592

Query: 222 ---------------------------DDFWKTIDPNDSLIRFPKEKDSRCN-------A 247
                                      + +   ++ ++ L     +  S           
Sbjct: 593 DWSLGERFVYDKSFLVSDGFERFTEPLEVYENNLNKDEILQVPNFQGYSDSYDQNQLPFT 652

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           N        +D+     N               +E          SDH  I+ D+
Sbjct: 653 NYCQVFNGTLDFIFHSNNVKVKRNMPGIKAEEASEYIGLPSKLYPSDHLSIAADF 707


>gi|19113223|ref|NP_596431.1| inositol-polyphosphate 5-phosphatase (synaptojanin homolog 1)
           [Schizosaccharomyces pombe 972h-]
 gi|51701908|sp|O43001|SYJ1_SCHPO RecName: Full=Inositol-1,4,5-trisphosphate 5-phosphatase 1;
           AltName: Full=Synaptojanin-like protein 1
 gi|2956769|emb|CAA17882.1| inositol-polyphosphate 5-phosphatase (synaptojanin homolog 1)
           [Schizosaccharomyces pombe]
          Length = 1076

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 81/311 (26%), Gaps = 58/311 (18%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLDADIVFLQEMGSYNAVAKVF 84
           + S+N+N  S    +  W        +D  ++  Q    L       Q++ S +   +  
Sbjct: 562 VASYNLNGCSATTKLENWLFPENTPLADIYVVGFQEIVQLTP-----QQVISADPAKRRE 616

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++      + +           +         I  ++  +  ++     +        +
Sbjct: 617 WESCVKRLLNGKCTSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKKTGLGGVS 676

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+ AV +  +     +  +  HL +        +            A  L+    +   
Sbjct: 677 GNKGAVAIRFDYEDTGLCFITSHLAAGYTNYDERDHD------YRTIASGLRFRRGRSIF 730

Query: 201 SLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIRFPKEKDSR 244
           +    V  GDFN +I+                     D   K +        F +   + 
Sbjct: 731 NHDYVVWFGDFNYRISLTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVFPFFSELPITF 790

Query: 245 CNANKN------------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
               K              R     D  +         +  S+  +              
Sbjct: 791 PPTYKFDIGTDIYDTSDKHRVPAWTDRILYRGEL----VPHSYQSVPL----------YY 836

Query: 293 SDHCPISIDYD 303
           SDH PI   Y+
Sbjct: 837 SDHRPIYATYE 847


>gi|261199552|ref|XP_002626177.1| sphingomyelinase [Ajellomyces dermatitidis SLH14081]
 gi|239594385|gb|EEQ76966.1| sphingomyelinase [Ajellomyces dermatitidis SLH14081]
 gi|239615550|gb|EEQ92537.1| sphingomyelinase [Ajellomyces dermatitidis ER-3]
          Length = 525

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/345 (11%), Positives = 70/345 (20%), Gaps = 80/345 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN 78
            +K+ +++ N   L         K            + +     D    IV LQE  +  
Sbjct: 10  PEKINILTLNCWGL---------KFLSTYRRERLLEIGKRIARSDDPPHIVGLQECWTQE 60

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GA 133
             + +  +    + Y                    +A+  K        Y         A
Sbjct: 61  DYSNIRRETREILPYGKFYFSGIFGG--------GLAILSKWPIEESTMYEYPLNGRPTA 112

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    +      + I        ++           E   S  C   + QA  +  
Sbjct: 113 FFRGDWFVGKGVACARIRIGPSPTDTAEVFCTHLHAPYEKEPRDSYLC-HRTAQAWEIGK 171

Query: 194 WITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDPNDSLIRFPK------ 239
            +    E     +  GDFN                  D W  + P+ S+           
Sbjct: 172 LMRAAAERGHLVIGLGDFNMLPQSFAHRLITSHAPVKDVWIHLHPDSSIGAAVDAVEMAR 231

Query: 240 ---------------EKDSRCNANKNLRNKI----------------------PIDYFVM 262
                                                                 +DY  +
Sbjct: 232 KKPVPSADFNIIENGATCDGIFNTWRWNKSQQKRLKREGHIEVDGQLPDPLGKRLDYIFI 291

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKR----LSDHCPISIDYD 303
              AY          I+     +  R       LSDH  +     
Sbjct: 292 GDGAYSNFSSPRKWTIVSARVSMMERHPTLHCSLSDHFGVEATIT 336


>gi|219518876|gb|AAI43635.1| Unknown (protein for MGC:177164) [Homo sapiens]
          Length = 638

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 75/284 (26%), Gaps = 56/284 (19%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +   Q   L+DW+   ++S                V+ GDFN                  
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFT 530

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---------LRNKIPID 258
                              T+   + L               +           N   ID
Sbjct: 531 HYRDPCRLGPGEEKPWAIGTLLDTNGLYDEDVCTPDNLQNKSSGQKGRKELLKGNGRRID 590

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y +  +       +    E  +           L+DH P+++  
Sbjct: 591 YMLHAEEGLYPDWKAEVEEFSFITQL-----SGLTDHLPVAMRL 629


>gi|332322180|emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 78/288 (27%), Gaps = 65/288 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++SWNI  L+                   + LR+     D   +FLQE    +       
Sbjct: 3   IISWNIRGLNA--------------RVKKSSLRKLISRHDPKFIFLQETKMES-----LN 43

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
             T    ++++ +         N        +     +                      
Sbjct: 44  PKTIRSIWNSDDIDWLFIPSIGNSGGLLSMWKIDYFSLTSHKSENNW------------- 90

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           + L  +I  K    + +++ + C                  +++          ES  P 
Sbjct: 91  IALNGKIPSKNFQGVLVNVYNPCC--------------RVSRSKVWTSISDYWAESQSPM 136

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDS------LIRFPKEKDSRCNANKNLRNKIPIDY 259
           ++ GDFN  ++           +   D                       + + K  +D 
Sbjct: 137 LMVGDFNEVLDPSDRGSGISSQLGVLDFKNFIQQTHLMEISASDGWFTWFSGQAKSKLDR 196

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI---DYDF 304
            +++               L+    +    + LSDHCP+ +   + ++
Sbjct: 197 LLVNPE----------WVSLFPSLQVSILRRNLSDHCPLLVKSDELNW 234


>gi|212544628|ref|XP_002152468.1| DNA lyase Apn2 [Penicillium marneffei ATCC 18224]
 gi|210065437|gb|EEA19531.1| DNA lyase Apn2 [Penicillium marneffei ATCC 18224]
          Length = 607

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/310 (10%), Positives = 63/310 (20%), Gaps = 70/310 (22%)

Query: 52  SDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNN 108
            D          L+ADIV  QE  +   +    +     W  ++S       +S      
Sbjct: 12  RDNRSFNSMFNILEADIVIFQETKIQRKDLRDDMVLVPGWDCYFSLPRHKKGYSGVVIYT 71

Query: 109 DIHTAIAVR----------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
                  +R            +     +  P       +        +++   +   +  
Sbjct: 72  RNEVCAPIRAEEGITGLLCPPSTTTPYRHLPDDQQIGGYPSMEQLNDLQIDPAVLDCEGR 131

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQ--AQWLKDWITQKKESLVPFVIAGDFNRKIN 216
            + +   +F                  +Q     L   I          ++ GD N    
Sbjct: 132 CVILEFPAFVLFGLYCPAARDETRDHFRQGFITLLDARIRNLVAMGKRVIVTGDLNISAG 191

Query: 217 ----------------------YLGNNDDFWKTIDPND-------------SLIRFPKEK 241
                                        F + ++                         
Sbjct: 192 EIDSAHLTEAIRKGTGSEDEFVSGPVRRVFNQLVEGAKVIGKRDSGREVPVLHDICRSFH 251

Query: 242 DSRCNANKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
             R                     IDY +   +   +  + +              G   
Sbjct: 252 PDRRGMYTCWETRVNARPGNYGARIDYILSSLDIKDWWSEGNIQ-----------EGLMG 300

Query: 293 SDHCPISIDY 302
           SDHCP+   +
Sbjct: 301 SDHCPVYAVF 310


>gi|292492991|ref|YP_003528430.1| endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4]
 gi|291581586|gb|ADE16043.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4]
          Length = 248

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/283 (11%), Positives = 70/283 (24%), Gaps = 48/283 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + + N+                +R +     LRQ+      DI+ +QE+    + A +  
Sbjct: 9   VCTHNLW-------------KDERWSDRQEPLRQFITLHQPDILCVQELR-PQSRALLDQ 54

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                            + +   +      +               GA+D       RR 
Sbjct: 55  VLKTHQRVDDSFGGWIKEGNIYWNQALFNLI-------------EYGAEDIGILEQWRRL 101

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
             + ++        L +    + +  +     S   ++   QA      + +  +   P 
Sbjct: 102 FWVRLQPLATAGPPLLVATAHYTWPGNR-KERSDGINVRIGQALSTVKALNRLVDPSSPL 160

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----NKIPIDYFV 261
           +  GD N        +    K +        F                       +D+ +
Sbjct: 161 LFMGDLND-------HYLPLKVLREAGLTDCFTALNRIPHVTRPTFPTHDHTPEVVDWML 213

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                           +  +  D        SDH P+   Y +
Sbjct: 214 HRGPLQP---------MTCDVVDFFVEDVAPSDHKPLLTTYRW 247


>gi|229548894|ref|ZP_04437619.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis ATCC 29200]
 gi|255971408|ref|ZP_05421994.1| predicted protein [Enterococcus faecalis T1]
 gi|256957186|ref|ZP_05561357.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis DS5]
 gi|257077842|ref|ZP_05572203.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis JH1]
 gi|257421203|ref|ZP_05598193.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis X98]
 gi|294780545|ref|ZP_06745908.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis PC1.1]
 gi|307268034|ref|ZP_07549422.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4248]
 gi|312952774|ref|ZP_07771636.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0102]
 gi|229305915|gb|EEN71911.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis ATCC 29200]
 gi|255962426|gb|EET94902.1| predicted protein [Enterococcus faecalis T1]
 gi|256947682|gb|EEU64314.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis DS5]
 gi|256985872|gb|EEU73174.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis JH1]
 gi|257163027|gb|EEU92987.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis X98]
 gi|294452372|gb|EFG20811.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis PC1.1]
 gi|306515675|gb|EFM84202.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4248]
 gi|310629290|gb|EFQ12573.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0102]
 gi|315032411|gb|EFT44343.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0017]
 gi|315034354|gb|EFT46286.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0027]
 gi|315148117|gb|EFT92133.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4244]
 gi|315153031|gb|EFT97047.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0031]
 gi|315155263|gb|EFT99279.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0043]
 gi|315157589|gb|EFU01606.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0312]
 gi|323480139|gb|ADX79578.1| endonuclease/Exonuclease/phosphatase family protein [Enterococcus
           faecalis 62]
          Length = 274

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFY------- 93
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPVATQTPVHEDNFAYLIVQYLAEK 82

Query: 94  -STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQHYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLAMGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|218196473|gb|EEC78900.1| hypothetical protein OsI_19281 [Oryza sativa Indica Group]
          Length = 311

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/315 (11%), Positives = 76/315 (24%), Gaps = 55/315 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + +++ N++             S         +      +    I+  Q       +  
Sbjct: 5   SITVMTLNLH------EGEQPSESPNSWERRRDICVSVITSYSPTILCTQ-----QGLRW 53

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                  C+    +  I+    + N D +  I   K+ V + +     L    S   + +
Sbjct: 54  QLDYLQQCLPGYEQFGISRKGSEDNTDEYCTIFYEKEKVELTEGGTFWLSESPSVPGSVS 113

Query: 143 RRAVE---LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             A         I+     +  +    F F     N    S     + A      I    
Sbjct: 114 WGATAPCIATWAISFDTFQLKQVEPPGFSFQIVNTNLDEDSPRARRRSALLTWQHIAS-L 172

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRNK 254
              +P +  G FN +   +       +      +          + + +    +     K
Sbjct: 173 PPNLPVIYCGGFNTQKESMTGRFLLGRSREHGVVGDMRDAWPNARVRKNVSLIHTYHGFK 232

Query: 255 I---------------------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                                        ID+ +        L+      I  N D    
Sbjct: 233 GEKQGALEFLKLIFRALCLCWDRQTQDLHIDWILFRGR---PLVPALCEVINDNID---- 285

Query: 288 RGKRLSDHCPISIDY 302
            G   S H PI  ++
Sbjct: 286 -GVYPSSHFPIFAEF 299


>gi|327354699|gb|EGE83556.1| sphingomyelinase [Ajellomyces dermatitidis ATCC 18188]
          Length = 525

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/345 (11%), Positives = 70/345 (20%), Gaps = 80/345 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYN 78
            +K+ +++ N   L         K            + +     D    IV LQE  +  
Sbjct: 10  PEKINILTLNCWGL---------KFLSTYRRERLLEIGKRIARSDDPPHIVGLQECWTQE 60

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GA 133
             + +  +    + Y                    +A+  K        Y         A
Sbjct: 61  DYSNIRRETREILPYGKFYFSGIFGG--------GLAILSKWPIEESTMYEYPLNGRPTA 112

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    +      + I        ++           E   S  C   + QA  +  
Sbjct: 113 FFRGDWFVGKGVACARIRIGPSPTDTAEVFCTHLHAPYEKEPRDSYLC-HRTAQAWEIGK 171

Query: 194 WITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDPNDSLIRFPK------ 239
            +    E     +  GDFN                  D W  + P+ S+           
Sbjct: 172 LMRAAAERGHLVIGLGDFNMLPQSFAHRLITSHAPVKDVWIHLHPDSSIGAAVDAVEMAR 231

Query: 240 ---------------EKDSRCNANKNLRNKI----------------------PIDYFVM 262
                                                                 +DY  +
Sbjct: 232 KKPVPSADFNIIENGATCDGIFNTWRWNKSQQKRLKREGHIEVDGQLPDPLGKRLDYIFI 291

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKR----LSDHCPISIDYD 303
              AY          I+     +  R       LSDH  +     
Sbjct: 292 GDGAYSNFSSPRKWTIVSARVSMMERHPTLHCSLSDHFGVEATIT 336


>gi|303389730|ref|XP_003073097.1| exodeoxyribonuclease III [Encephalitozoon intestinalis ATCC 50506]
 gi|303302241|gb|ADM11737.1| exodeoxyribonuclease III [Encephalitozoon intestinalis ATCC 50506]
          Length = 331

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 81/313 (25%), Gaps = 50/313 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ S+N+N +       +  + ++        L        ADI+ +QE          
Sbjct: 14  MRITSFNVNGIRSFSKYIMKSHRLRFNDYVKETL-------KADILCVQETRGNKNALNE 66

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------------YPLL 131
           F      I +++    N  +   +  +   +  R        +                L
Sbjct: 67  FHSLKDYITFTSTNKRNSGRSGVSTIVSKKLYCRGILPSPFSEEGRSLLTDHGDYKVLNL 126

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIW------VLDIHLKSFCFLDSLENTYSPSCSL-- 183
                   +G  ++  +       +        V+     +   +      Y+    +  
Sbjct: 127 YFPFFDENSGKDKSEVIKFYNEVGRFIRMHENMVICGDFNAVYSIVDHYQFYNELLRIQR 186

Query: 184 --LSQQAQWLKDWITQKKESLVPFVIAGD--FNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              +   +  +       ++ +P+    +         +         +D  + +  +  
Sbjct: 187 MGRTGWTKETRRMKKCPSKTELPYEFCSEDALEAYFFEVQQRKWLKNLVDSGEYIDTYRI 246

Query: 240 EKDSRCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                 +                  IDY ++    +  L        +Y           
Sbjct: 247 LHTRPESYTCWNTMLNLRPRNLGTRIDYILIPSGFFYKLKDCDIQPKIY----------- 295

Query: 292 LSDHCPISIDYDF 304
            SDHCP+  + DF
Sbjct: 296 GSDHCPVYAEMDF 308


>gi|302543202|ref|ZP_07295544.1| membrane protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302460820|gb|EFL23913.1| membrane protein [Streptomyces himastatinicus ATCC 53653]
          Length = 301

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 73/293 (24%), Gaps = 66/293 (22%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
             +P   + A  + +V  N+                    +D     +       D+V L
Sbjct: 70  LFLPGATTGAHDLVVVQHNV----------------SDENADPAGTARALAGASPDLVAL 113

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +E+                     E+ +              +  +              
Sbjct: 114 EEL-------------VPAALPVYEKTLAPDYPYHAVRGTVGLWSKHPLAEARLLDIKPR 160

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           G  +S+SR      +  +V     ++     HL S     S       + S   + A  L
Sbjct: 161 GITESWSR-----GLRAVVRTPRGEVAAYVAHLPSVRVGASG-----LASSWRDESAGLL 210

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + I  +K    P ++ GD N  ++  G +    +                    +    
Sbjct: 211 GEAIAAEKRK--PVILMGDLNGTVDDRGLDPLTSRLNVAERGF----------AFSFPAG 258

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                ID  +    A   +     +                SDH P++    +
Sbjct: 259 FPLARIDQVMARSAAVGHIRTLPAT---------------GSDHLPVAARVRW 296


>gi|190345761|gb|EDK37701.2| hypothetical protein PGUG_01799 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1022

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 81/309 (26%), Gaps = 52/309 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--------SYNA 79
           ++N+N   E +           ++ DY L+           + LQE+           ++
Sbjct: 622 TFNVNASCEDQDKFKSWLFPPGSSGDYDLV----------FIGLQEIVELTASQMVDTDS 671

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + +   +    +                +     IA+     +   +    +      + 
Sbjct: 672 LRRQMWEMHLRVCLEANNTTQSRYILLWSGQLGGIALFLFVKQSELKEIHDVEGSFKKTG 731

Query: 140 AG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            G    N+ AV +    +   + ++  H  +                      + +K   
Sbjct: 732 FGGVSANKGAVAVRFNYSNTGLCLVASHFAAG------HGNTIERHQNFKTIGKGIKFSK 785

Query: 196 TQKKESLVPFVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPK 239
            ++ +     +  GDFN +IN                     D   + +   +S   F +
Sbjct: 786 NRRIKDHDAVIWLGDFNYRINLPLEQVHALVEKKDFPRLFEYDQLNQQMASGESFPYFDE 845

Query: 240 EKDSRCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
            +       K        D                ++  S  +I+       S   + SD
Sbjct: 846 MELRFKPTYKFDNGTSTYDTSEKQRI---PAWTDRILSLSRKKIIKQHLYDCSDEIKFSD 902

Query: 295 HCPISIDYD 303
           H P+     
Sbjct: 903 HRPVYATLT 911


>gi|71017527|ref|XP_758994.1| hypothetical protein UM02847.1 [Ustilago maydis 521]
 gi|46098772|gb|EAK84005.1| hypothetical protein UM02847.1 [Ustilago maydis 521]
          Length = 525

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/364 (11%), Positives = 86/364 (23%), Gaps = 97/364 (26%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQE 73
             S   ++ +++ N+  L     + +         +    +     + D    D V LQE
Sbjct: 32  PPSDDHQLSILTLNVWGLKYISKLRI---------ARIKAIASRLASSDMPLYDFVCLQE 82

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL--- 130
           +   +   +          ++      HSK   +    + +A+  +   +  +++P    
Sbjct: 83  IWYESRDWRFLK-------HALSSRYPHSKFFYSGAFGSGLAILSRWNILETRTHPYSLN 135

Query: 131 --LGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                         +    + +       + V + H  +    D  E   S        Q
Sbjct: 136 GQPIHVHHGDWFVGKACGSVTINHPRLGLVDVWNTHFVAAGGEDGPEYKRS----HRITQ 191

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---------NDDFWKT----------I 228
           A  L              V  GD N     L            D F  T          +
Sbjct: 192 AYELAANCRNSASKGRHVVCVGDLNSTPPSLAIGLLRHIGGLYDSFLDTRPQLPEHAVSL 251

Query: 229 DPNDSLI-------------------RFPKEKDSRCNA-------NKNLRNKIPIDYFVM 262
           DP ++                         +                +      +DY   
Sbjct: 252 DPEETSTQVGDRATAAPDPQRAIEELGVTCDSPLNTWTAGKPLDERASRGAGKRLDYIFY 311

Query: 263 DQNAYKFLIQESFSEILYN-----------------------EDDIKSRGKRLSDHCPIS 299
                +    ES +  + +                        D I       SDH  ++
Sbjct: 312 RGPVDQQHSSESNASTVSSALAYSASHSTRGRLTCKSSSVVITDTIPEHLCSYSDHFGVA 371

Query: 300 IDYD 303
             +D
Sbjct: 372 STFD 375


>gi|229491820|ref|ZP_04385641.1| endonuclease/exonuclease/phosphatase family protein [Rhodococcus
           erythropolis SK121]
 gi|229321501|gb|EEN87301.1| endonuclease/exonuclease/phosphatase family protein [Rhodococcus
           erythropolis SK121]
          Length = 373

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 90/335 (26%), Gaps = 60/335 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
           AS AQ+++++S N      +                  L+     +  A IV L E G+ 
Sbjct: 36  ASPAQEIKVLSLNTWHGGTKINGG------------LQLIADMIISTQASIVLLSEAGTA 83

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A+A +  K+    + +    +    +    +     ++ K  V V  +      A  +
Sbjct: 84  TTALADMLTKSGTTFYGAASSDVGILSKFPIEETADLNSMIKAVVTVDGKQIAAYSAHLA 143

Query: 137 FSRAGNRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           ++             V   G+        + S    D          S   +      D 
Sbjct: 144 YTSYATYLPRGYGAGVPKPGEFSEFGWNKMPSGPVTDPETVQRVNVNSGRPKAISTFVDD 203

Query: 195 ITQKKESLVPFVIAGDFNRK--INYLGNNDDFW------------KTIDPNDSLIRFPKE 240
             +++      ++ GDFN    +++     + +            + +D    +  +  +
Sbjct: 204 AAKERAKGRSVILGGDFNEPSALDWTDGTRNLFDHNGVVVPWESTRLLDQAGFVDAYRSK 263

Query: 241 KDSR-CNANKNL------------------RNKIPIDYFVMDQNAYKFLIQESF------ 275
             +   +                         +  IDY   D+ +   L           
Sbjct: 264 YPNPATHPGFTWPSDNPDVDTSQLTWAPEADERDRIDYIFADRASDLKLGSVGIIGPRKT 323

Query: 276 SEILYNEDDIKSRGKRLS------DHCPISIDYDF 304
                  ++        S      DH  +   Y F
Sbjct: 324 IVHNQRVEENSQDNFIASPTPWPTDHKAVLATYRF 358


>gi|126641246|ref|YP_001084230.1| putative extracellular nuclease [Acinetobacter baumannii ATCC
           17978]
 gi|126387130|gb|ABO11628.1| putative extracellular nuclease [Acinetobacter baumannii ATCC
           17978]
          Length = 298

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 67/237 (28%), Gaps = 45/237 (18%)

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLD 161
           R  ++ I  AI    K V+ L ++  L           NR  +    +     K   V+ 
Sbjct: 35  RLGSDVIAVAIIYNSKRVKPLNKAVVLDLGD------KNRTTLAQTFQAVRGNKTFTVIP 88

Query: 162 IHLKSFCFLDSLENTYSPS--------CSLLSQQAQWLKDWITQKKE--SLVPFVIAGDF 211
            HLKS        N+                 +    +  W+ +          ++ GD 
Sbjct: 89  NHLKSKGCSGVDANSSDADQNDGQGCWNPTRVKAVDQIVQWLAKNPTQVPKQNALLVGDM 148

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN--------LRNKIPIDYFVMD 263
           N            ++  +    L      + ++  +                 +D+ + D
Sbjct: 149 NSYAKEAPI--LAFEKANYKVLLNDAKVGQGAQAYSYVFGVASDANGNGGAGNLDHAIAD 206

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYD 303
            + Y  +++     I  +E  +                      R SDH P+ +D D
Sbjct: 207 ADLYPKVVRTFAWHINADEPTVLDYNEEYKTDEQKALFYGEDAYRSSDHDPVIVDLD 263


>gi|161526218|ref|YP_001581230.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC
           17616]
 gi|189349068|ref|YP_001944696.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616]
 gi|221199701|ref|ZP_03572744.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
 gi|221208694|ref|ZP_03581694.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221215535|ref|ZP_03588498.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD1]
 gi|160343647|gb|ABX16733.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC
           17616]
 gi|189333090|dbj|BAG42160.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616]
 gi|221164523|gb|EED97006.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD1]
 gi|221171505|gb|EEE03952.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221179940|gb|EEE12344.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
          Length = 271

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 81/310 (26%), Gaps = 68/310 (21%)

Query: 12  FLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             VP     A   ++  VSWN++      G + W             +R + ++  AD+ 
Sbjct: 6   LSVPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWN-----------AMRDWMQSTHADVY 54

Query: 70  FLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           FLQE  +                 +    V+      I  + +  I              
Sbjct: 55  FLQEAMARRMPRPVLAQGFGAPMDDVDDDVWHCQATEIARALDWQIALGPNVFKPSWRHG 114

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+   +   L   + +        R   R  +     + G + + +L  HL        
Sbjct: 115 NAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGARPVTLLCAHLALT----- 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                    +   +Q  W+  WI +      P V+AGDFN         +D         
Sbjct: 165 --------RAARLRQMHWIAHWIVRNAGDD-PLVLAGDFNDW------RNDSVAVFGEIG 209

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                    +S           + +D   +                        S    L
Sbjct: 210 LSEVATLLGESG-RTFPAFSPALALDKMFVRG------------LTPLEWRAPSSETAWL 256

Query: 293 SDHCPISIDY 302
           SDH P     
Sbjct: 257 SDHLPYIARL 266


>gi|332254455|ref|XP_003276345.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like
           [Nomascus leucogenys]
          Length = 421

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 63/220 (28%), Gaps = 29/220 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+VSWNIN +      +  +            + +    LDADIV LQE  +       
Sbjct: 2   LRVVSWNINGIRRPLQGAANQEPSNCAAV---AVGRILDQLDADIVCLQETKVTRDALTE 58

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKDS 136
            +     +  ++S  R  +     +      A  V                    G  D 
Sbjct: 59  PLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDE 118

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLL 184
           F++   R                  E   K + +++++                    LL
Sbjct: 119 FTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLL 178

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
             +A+ L         +    +I GD N     + + D  
Sbjct: 179 QIRAEALLA-------AGSHVIILGDLNTAHRPIDHWDAV 211


>gi|313237482|emb|CBY19922.1| unnamed protein product [Oikopleura dioica]
          Length = 391

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 77/246 (31%), Gaps = 20/246 (8%)

Query: 17  TASVAQKVRLVSWNI------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           TA  + K RL SWNI      +  S   G    K  +      +T +    K LD+D++ 
Sbjct: 39  TADDSSKFRLSSWNILAQDYADRCSHLYGHLASKKQLLNWPVRWTKISDEIKELDSDVLC 98

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE+ S    ++V P      F    R      +  N    + IA ++   + +      
Sbjct: 99  LQEVQSSCYESEVRP------FLERLRYKCRYLQKRNLPDGSLIAFKEGIFKKVLTKEIH 152

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           +   D          V L    +GK I V   HL                   + +    
Sbjct: 153 MWHPDKCPTGQIGLLVLLEHVKSGKMILVSTTHLVFNP------YRGDWKLKQIMEILAE 206

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           + + +          V+ GD N + +         K  D +    R   ++D    + + 
Sbjct: 207 IHEILR-NSRQKPAVVLCGDLNSQPHSSLVQFLLNKKFDLSGIRARDIAQQDYDF-SRQY 264

Query: 251 LRNKIP 256
                 
Sbjct: 265 NYYGRR 270


>gi|242058129|ref|XP_002458210.1| hypothetical protein SORBIDRAFT_03g029010 [Sorghum bicolor]
 gi|241930185|gb|EES03330.1| hypothetical protein SORBIDRAFT_03g029010 [Sorghum bicolor]
          Length = 1150

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 76/286 (26%), Gaps = 65/286 (22%)

Query: 24   VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            + ++ WN+  L++               +   L+R+        IV LQE    +    +
Sbjct: 874  LSVLCWNVRGLND--------------AAHRELVRETVACSRPTIVCLQETKISHIKTNL 919

Query: 84   FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +       +   L     R           +   N      +     +  S S +   
Sbjct: 920  VTQTVGQQLNTYAELGAQGTRGGILLAWNKDMISISNPVSRVFTISATVSVPSSSTSFL- 978

Query: 144  RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                              +        D  +               +L + +        
Sbjct: 979  ------------------LTTCYGPADDGRKED-------------FLAELLECNPGPQS 1007

Query: 204  PFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
            P++IAGDFN        N+          F + +D  +      + +    +  ++    
Sbjct: 1008 PWLIAGDFNLIYQADDKNNLNLNRRMMGKFRRALDDCELFELTLQNRRYTWSNERSNPTL 1067

Query: 255  IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            + +D    +             E+ +    + +     SDHCP+ +
Sbjct: 1068 VRLDRVFCNAE----------WEVSFPNFALSALSTGASDHCPLFL 1103


>gi|254418585|ref|ZP_05032309.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
 gi|196184762|gb|EDX79738.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
          Length = 317

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 66/252 (26%), Gaps = 49/252 (19%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           D   +R+   + DADIV L E+G         P +      +         R  +     
Sbjct: 110 DVAAIRRSIVDADADIVVLVEVGD-------APSDRLDEVLAGYPNRAVMGRIEDPSGRA 162

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
              V  +          L   +D         A+  +VE     + V  +HL        
Sbjct: 163 LSIVASRYPI----QGKLPSFRDDL------AAIGAVVETPIGAVNVFGVHLTRPWPYQY 212

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                         Q   L     ++K +  P ++AGDFN  ++           ++   
Sbjct: 213 QWGQ--------INQVMALTA--RREKAAPHPTIVAGDFN-SVSSARIGRQIQSDMN--- 258

Query: 233 SLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                P         ++        ID      +                    +     
Sbjct: 259 ---LSPAPGFPGTWPSRLPAFAGITIDQVYRSPDLA--------------LISRRIGEPT 301

Query: 292 LSDHCPISIDYD 303
            SDH P+  ++ 
Sbjct: 302 GSDHYPVVTEFT 313


>gi|295113857|emb|CBL32494.1| Metal-dependent hydrolase [Enterococcus sp. 7L76]
          Length = 274

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFYST----- 95
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPVATQTPVHEDNFAYLIVQYLAEK 82

Query: 96  ---ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQNYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLAMGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|213409686|ref|XP_002175613.1| conserved hypothetical protein [Schizosaccharomyces japonicus
           yFS275]
 gi|212003660|gb|EEB09320.1| conserved hypothetical protein [Schizosaccharomyces japonicus
           yFS275]
          Length = 487

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 67/214 (31%), Gaps = 17/214 (7%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76
                 ++S+N+   +        K     +      +L     +    +  +QE+ +  
Sbjct: 73  QPLTFTVMSYNVLAQTNIRRTMFPKSGDALKWKFRSRMLENELLHYMPTVGCMQEVDAEF 132

Query: 77  -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             +   KV  ++ + + +       H            +  +  +V +    +  L  + 
Sbjct: 133 VPSFYQKVLEEHGYKVHFVRYPGKTHG---IFVFWSAKVFTKVNDVTISYDEHDELPGRM 189

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                G   A++  ++   + I++   HL    F          S   L Q A  +K+  
Sbjct: 190 PTKNVGCCVALQ-RIDQPDRGIYLATTHLFWHPFG---------SYERLRQGALLVKEVN 239

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
              +    P  IAGDFN +           + +D
Sbjct: 240 KFAQSHPWPVFIAGDFNTEPYDTNFPALTTRPLD 273


>gi|160872637|ref|ZP_02062769.1| putative endonuclease/exonuclease/phophatase family protein
           [Rickettsiella grylli]
 gi|159121436|gb|EDP46774.1| putative endonuclease/exonuclease/phophatase family protein
           [Rickettsiella grylli]
          Length = 509

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 86/299 (28%), Gaps = 42/299 (14%)

Query: 23  KVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           ++ + ++N+       +       +  R       L  Y      D+V L+E+       
Sbjct: 214 QLTIGTYNVQLWPFYAKVAMRMNEAKMRAQLIPLNLTHY------DVVVLEELMDKKYRN 267

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +V         Y     ++H+       I++       +  +L++   +    +      
Sbjct: 268 EVSTLMRRDYPYQYGPTMDHAPLSGGTVIYS-------HWPILKKDSLIYQECNQVDCGA 320

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKKE 200
            + A+ + ++       +   HL++        +T +       +Q   L+ +I  QK  
Sbjct: 321 AKGALYIKIKKGNVIYNIFGTHLQA----TEGAHTAARDEVARDKQFNHLRQFIKKQKIN 376

Query: 201 SLVPFVIAGDFNRKIN----YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
                +IAGD N             +     +  +    R+         ++        
Sbjct: 377 KNQAVIIAGDLNIDYQACFLRKECKEYQKTILTVDKHYPRWNNISIVPFGSDPTKNLMNT 436

Query: 257 I------DYFVMDQNAYKFLIQESFSEILYNEDDI-------------KSRGKRLSDHC 296
                  DY + D  +Y   I +     +  E  I                   LSDH 
Sbjct: 437 DPEGEMEDYILPDSTSYLAPIAQQSHIRVIREPAIPIMYDGGLQVLHNPFGDLDLSDHF 495


>gi|50083722|ref|YP_045232.1| hypothetical protein ACIAD0480 [Acinetobacter sp. ADP1]
 gi|49529698|emb|CAG67410.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter sp. ADP1]
          Length = 373

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/251 (11%), Positives = 63/251 (25%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL +  + L  D+V   E               W    S        +     D  
Sbjct: 115 KKYHLLIEQIQQLMPDVVLTLETDQT-----------WQNELSVIEADYPYQVAVPLDNL 163

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +   +  Q   +L  +              ++  +G  + +  +H K     +
Sbjct: 164 YGMHLYSRFKLLDTQVKFILSDEIPSIHTK-------VILPSGLAVQLCCLHPKPPSPTE 216

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++T   +          L     Q K+     ++ GD N            ++ I   
Sbjct: 217 AKDSTLRDA---------ELLIVGDQIKDMNDSCIVMGDLNDVAWSRTTR--LFQRIS-- 263

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +   D+      
Sbjct: 264 GLLDPRVGRHFVNTFHADYPLLRWSLDHIFHS--------------TDFALVDMHRLRHI 309

Query: 292 LSDHCPISIDY 302
            SDH P+ +  
Sbjct: 310 GSDHFPVYVVL 320


>gi|317151124|ref|XP_001824462.2| DNA lyase [Aspergillus oryzae RIB40]
          Length = 556

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 66/294 (22%), Gaps = 61/294 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
            R+ +WN+N +        W     R    +  + +  +   ADIV LQE  +   +   
Sbjct: 3   FRITTWNVNGIRNPFAYEPW-----RGKRTFEAMFEILE---ADIVVLQETKIQRKDLRD 54

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR----------KKNVRVLQQSYPL 130
            +     W   +S       +S         T   +R            N  V  +  PL
Sbjct: 55  DMVLVPGWDCHFSLPRSKKGYSGVVIYTRNATCAPLRAEEGLTGVLCPPNSSVPFRDLPL 114

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQA 188
                 +        +EL       +   + +   +F  L                    
Sbjct: 115 DRQIGGYPTTEQLSTLELDAATLDSEGRCVILEFPAFVLLGLYCPANRDESRDSFRQGFL 174

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +   I           + GD N     +              +               
Sbjct: 175 DLMDARIRNLVAMGKRVFVTGDLNISRGEIDAAHASEAIRKGTTTEDDL----------- 223

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                           N   +  +                G   SDHCP+   +
Sbjct: 224 ----------------NMQDWFCESDIQ-----------EGLMGSDHCPVYAIF 250


>gi|330935895|ref|XP_003305170.1| hypothetical protein PTT_17936 [Pyrenophora teres f. teres 0-1]
 gi|311317927|gb|EFQ86726.1| hypothetical protein PTT_17936 [Pyrenophora teres f. teres 0-1]
          Length = 1740

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 66/223 (29%), Gaps = 8/223 (3%)

Query: 1   MIRKYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           M+ K  +     LV      + +  +R+++ NI   +        K    R       L 
Sbjct: 1   MMFKASIPFTTLLVINMRIHTTSLPIRILTHNIRY-AANPPSKGEKPWSTRKQLLLNELH 59

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
               +     + LQE+     V  +   ++   +    R    +  + N  I+       
Sbjct: 60  YQTLHNAESFICLQEVLHSQLVDIMCGLSSEWAYIGVGRDDGKTNGEYNPIIYRPTIWHL 119

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
              + +  +      K  +     R       +    K  V+ +        ++   +  
Sbjct: 120 IKWQTVWLNENGAVGKRGWDAGCARIITIGTFQHRHSKETVIAMSTHL---DNAGPVSRR 176

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            S  ++ +    +         +++PF +AGD N +       
Sbjct: 177 KSAKIIQKVVADVTS--DATSTTVLPFFLAGDLNSETTGEAYK 217


>gi|255716040|ref|XP_002554301.1| KLTH0F02090p [Lachancea thermotolerans]
 gi|238935684|emb|CAR23864.1| KLTH0F02090p [Lachancea thermotolerans]
          Length = 440

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 89/315 (28%), Gaps = 55/315 (17%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQ 72
               ++ ++ N   L         +            +      L       D D+V LQ
Sbjct: 6   AGADIKFLTLNTWGLKYVSKFRKERLREIANKLAGRSMALPLHGLEEDSGSDDYDVVALQ 65

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--QSYPL 130
           E+   +          +       R        S       +A+  K          +P+
Sbjct: 66  EIWCKSDWE-------YIEETCRHRYPYRRIFYSGIIAGPGLAILSKIPIESTFLYRFPI 118

Query: 131 LGAKDSFSRAGNRRAVELLVEI------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            G   +F R        + V +      +   + +L+ H+ +          Y       
Sbjct: 119 NGRPSAFFRGDWYVGKSVSVTLLKPTSSSSNALAILNSHMHAPYAQSGDAAYY----CHR 174

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDPNDSLIR 236
           S QA  +       K++    VI GD N K   L +            W+ +     L+R
Sbjct: 175 SCQAWDMSQMANLYKKAGYAVVIVGDLNSKPGTLPHKFLTKETGFVDSWEQLHGKQDLVR 234

Query: 237 FP--------KEKDSRCNA--NKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYN 281
                     K+  + C++  N     +       +DY ++D +  + L        +  
Sbjct: 235 ISKLDPLLQIKQGGTTCDSILNTWRSMRRPDEACRLDYALVDPSRLQTLEAC-----VRF 289

Query: 282 EDDIKSRGKRLSDHC 296
            + I   G   SDH 
Sbjct: 290 TERIPEIGS-FSDHF 303


>gi|42565086|ref|NP_188790.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|11994389|dbj|BAB02348.1| unnamed protein product [Arabidopsis thaliana]
 gi|51971657|dbj|BAD44493.1| unknown protein [Arabidopsis thaliana]
 gi|332642999|gb|AEE76520.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Arabidopsis thaliana]
          Length = 458

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 70/297 (23%), Gaps = 77/297 (25%)

Query: 39  GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFY 93
               W        S    + +  + LDADI+ LQ++ +        ++ +         +
Sbjct: 163 PSCWWDQESFNGYSSRRSIAELLRELDADILALQDVKAEEETLMKPLSDLASALGMKYVF 222

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           +      +             A+  K      +   +    D       R  +++ VEI 
Sbjct: 223 AESWAPEY-----------GNAILSKWPIKKWRVQRIADVDDF------RNVLKVTVEIP 265

Query: 154 G-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
               + V    L                 +   +Q   +            P ++ G  N
Sbjct: 266 WAGDVNVYCTQLDHL------------DENWRMKQIDAITR------GDESPHILLGGLN 307

Query: 213 RKINY-------------------LGNNDDFWKTIDPNDSLIRFPKEKD--------SRC 245
                                        +  + +     L       +           
Sbjct: 308 SLDGSDYSIARWNHIVKYYEDSGKPTPRVEVMRFLKGKGYLDSKEFAGECEPVVIIAKGQ 367

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           N     +    +DY +    +    +  S+S +              SDH  + +D 
Sbjct: 368 NVQGTCKYGTRVDYILASPESPYEFVPGSYSVVSSKGT---------SDHHIVKVDL 415


>gi|254565203|ref|XP_002489712.1| hypothetical protein [Pichia pastoris GS115]
 gi|238029508|emb|CAY67431.1| Hypothetical protein PAS_chr1-1_0071 [Pichia pastoris GS115]
          Length = 384

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/349 (10%), Positives = 84/349 (24%), Gaps = 67/349 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR--------------------TTSDYT 55
             A     +RL +WN+   S+  G S+     +                      +    
Sbjct: 39  VQAPSKSLIRLQTWNLRFDSQPNGESVQDTISRMERKVPQDNKISYYETSGEVPWSKRRI 98

Query: 56  LLRQYAKNLDADIVFLQE-----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +  +     A I  +QE     +   N +  +F  ++W                     
Sbjct: 99  SIANHVVFNGAGIFAVQEALYRQVQDLNELLNLFDSSSWDWIGLGRDDGKLGGEFEAIFY 158

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKS 166
            T     ++   +   ++ L       SR       R     L +  G++     I + +
Sbjct: 159 DT-----ERFELIEWDNFWLSKTPFEPSRYPGAGSLRTVTIGLFKFKGEESKNPFIIMNT 213

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR------------- 213
                S       S  +  + +   +    +        ++ GD N              
Sbjct: 214 HYDEQSENQRRLASSLIKYRASYEFERLKNEYGVENPSIILCGDLNSHSFNENSGGYRII 273

Query: 214 ----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR---------------NK 254
                +     + +F +     +      ++                             
Sbjct: 274 TGNQPLETDEISSEFAERFRSANLSKFNFRDLMEETPPQFRFGHLSTFTGFSKIGDTSKF 333

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHCPISIDY 302
             ID+               +  + Y  D+I    +   SDH P+  + 
Sbjct: 334 SRIDFQFGATWEEDGKTNHGWKALKYKVDEIFYDNEYPLSDHRPVVTEL 382


>gi|154487986|ref|ZP_02029103.1| hypothetical protein BIFADO_01554 [Bifidobacterium adolescentis
           L2-32]
 gi|154083459|gb|EDN82504.1| hypothetical protein BIFADO_01554 [Bifidobacterium adolescentis
           L2-32]
          Length = 391

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 83/279 (29%), Gaps = 62/279 (22%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N                 K   +D   + +  KN   +++ LQE+ S++ + ++ 
Sbjct: 173 RIMTFNT----------------KEGHADANRIVEIVKNEHVEVLALQEV-SWDLLNRLN 215

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                     +         +               V VL  + P+  AK +     +  
Sbjct: 216 GAGIANYLPYSVAAQQTWHDNGG-------------VNVLYSAAPMENAKQNLIPVESSS 262

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                ++  G K+    +H  S    +      S            L+ +          
Sbjct: 263 VSAATIDFGGSKVRFGSVHPFSPRPRNQGLWNRSLDS------LAQLQHY-------DNL 309

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           +V+ GDFN   ++       ++ +  +  L    +  +        +     ID+     
Sbjct: 310 YVLMGDFNSTWDHAS-----FRYLLGSRFLDSGQQAGEGLHMTYPAMMPIAEIDHI---- 360

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +   N  D++++    SDH  +    +
Sbjct: 361 ----------VHDKGVNVGDLETKYIAGSDHRALLATLE 389


>gi|145553143|ref|XP_001462246.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430085|emb|CAK94873.1| unnamed protein product [Paramecium tetraurelia]
          Length = 363

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 62/195 (31%), Gaps = 10/195 (5%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKVFP 85
           +S+NI   S  +  +  +       S + L+    K    DI+ LQE+    N ++++  
Sbjct: 1   MSYNILADSLLQD-NEKQLKQYDWKSRWPLIFSQIKKYKPDILCLQELDCDENDLSQLLI 59

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           ++ +   +      N     +   +     + K     L+Q +    +K    +      
Sbjct: 60  QDQYEKLFLKRSQENQKDGCALFYLKQKYKLIKSYNLHLKQEHLFCNSKTRMDKPNICLI 119

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
             L    +   + V + HL        + N       L   Q   +     Q K      
Sbjct: 120 AVLQGFNDQNPLIVANSHL--------IFNKNRGDLKLSQIQLIMITLQSLQLKYQNSRI 171

Query: 206 VIAGDFNRKINYLGN 220
           V  GDFN   N    
Sbjct: 172 VWCGDFNLTPNSALY 186



 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 38/149 (25%), Gaps = 14/149 (9%)

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--NY 217
           L+I  K   F    E         L  QA      +  + ++        + N       
Sbjct: 222 LNIQKKCGEFNIQYEQQDLDYDYDLYVQA------LRCQIDNDTFSFHQAELNPYPIVET 275

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                  +  +    S                    +      +DY  +++   +     
Sbjct: 276 PIQFRSVYADLQRAKSKDLHDFYAKWSTYEPLITTMSSSQVGCVDYIWINK--LQVSQVL 333

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +I Y  ++     +  SDH P+  D 
Sbjct: 334 QMPKIEYLIENPIVNYEEGSDHLPLVCDL 362


>gi|229818105|ref|ZP_04448387.1| hypothetical protein BIFANG_03396 [Bifidobacterium angulatum DSM
           20098]
 gi|229784709|gb|EEP20823.1| hypothetical protein BIFANG_03396 [Bifidobacterium angulatum DSM
           20098]
          Length = 362

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 78/300 (26%), Gaps = 66/300 (22%)

Query: 12  FLVPCTASVAQKV--------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
             V  T++VA  +        R+++ N+                 +  +D   +    +N
Sbjct: 118 VSVAATSAVAHSIADTDDQYARVMTLNVY----------------KGEADAQAIVDLVRN 161

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
              +++ LQE  S   + K+   +                + S  D      +       
Sbjct: 162 ERVEVLALQETTS-EFIEKLKNAHIETYL--------PYSQVSTMDGAYGNGLWSATPLA 212

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                 +  +              +      K++  + +H  S    D            
Sbjct: 213 DPVDDAVNSSASFMPGG------TVAFVGGQKQVRFVSVHTTSPWQGD------------ 254

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
             Q  + L +   ++ +    +V  GDFN  +++    +                    +
Sbjct: 255 WRQWKRSLDELGLKRADEGTRYVFMGDFNATMDHASMREFLGTRFHDAAYGSGHGFAFTA 314

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             N           D+ V+D +     +Q               +    SDH  +    D
Sbjct: 315 PANLFAVPTLTAA-DHVVVDSDMTAGQVQA--------------KRVSGSDHAALLATID 359


>gi|158300438|ref|XP_320360.4| AGAP012175-PA [Anopheles gambiae str. PEST]
 gi|157013159|gb|EAA00566.4| AGAP012175-PA [Anopheles gambiae str. PEST]
          Length = 1263

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/333 (11%), Positives = 77/333 (23%), Gaps = 59/333 (17%)

Query: 24  VRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ---YAKNLDAD----------I 68
            R+   ++N+N       V+    S+     D   L +          D           
Sbjct: 546 FRVACGTYNVNGGKHFRSVAYKDVSLADWLLDCHRLARSRSLVDFSQVDDSNEPPVDIFA 605

Query: 69  VFLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKN 120
           +  QE+   NA   V         W          +             +     +R ++
Sbjct: 606 IGFQEIVDLNASNIVAASSDNAKAWAEELQKVVSRDREYVLLTYQQLVGVCLYIYIRPQH 665

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
            + ++               GN+ A  +   ++G  I  +  H  +     +  N     
Sbjct: 666 AQYIRDVAIDCVKTGLGGATGNKGAAAIRFVLHGTSICFVCAHFAAGQSQVAERNADYAE 725

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------------ND 222
            +        +   + +  +S       GDFN +I+   +                   D
Sbjct: 726 ITRK------IAFPMGRSLKSHDYIFWCGDFNYRIDMDKDELREALKQSPHDLTAVLQYD 779

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFL 270
                 +       F + + S     K                    D  +  +      
Sbjct: 780 QLRIQQNAGSVFNEFLEGEISFPPTYKYDLFSDDYDTSEKCRAPAWTDRVLWRRRKQSPD 839

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                               + SDH P+    D
Sbjct: 840 ADRHPGWNPGRLVHYGRAELKQSDHRPVIAMID 872


>gi|328350130|emb|CCA36530.1| Plasminogen-binding protein pgbB [Pichia pastoris CBS 7435]
          Length = 349

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/349 (10%), Positives = 84/349 (24%), Gaps = 67/349 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR--------------------TTSDYT 55
             A     +RL +WN+   S+  G S+     +                      +    
Sbjct: 4   VQAPSKSLIRLQTWNLRFDSQPNGESVQDTISRMERKVPQDNKISYYETSGEVPWSKRRI 63

Query: 56  LLRQYAKNLDADIVFLQE-----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +  +     A I  +QE     +   N +  +F  ++W                     
Sbjct: 64  SIANHVVFNGAGIFAVQEALYRQVQDLNELLNLFDSSSWDWIGLGRDDGKLGGEFEAIFY 123

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKS 166
            T     ++   +   ++ L       SR       R     L +  G++     I + +
Sbjct: 124 DT-----ERFELIEWDNFWLSKTPFEPSRYPGAGSLRTVTIGLFKFKGEESKNPFIIMNT 178

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR------------- 213
                S       S  +  + +   +    +        ++ GD N              
Sbjct: 179 HYDEQSENQRRLASSLIKYRASYEFERLKNEYGVENPSIILCGDLNSHSFNENSGGYRII 238

Query: 214 ----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR---------------NK 254
                +     + +F +     +      ++                             
Sbjct: 239 TGNQPLETDEISSEFAERFRSANLSKFNFRDLMEETPPQFRFGHLSTFTGFSKIGDTSKF 298

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHCPISIDY 302
             ID+               +  + Y  D+I    +   SDH P+  + 
Sbjct: 299 SRIDFQFGATWEEDGKTNHGWKALKYKVDEIFYDNEYPLSDHRPVVTEL 347


>gi|15678949|ref|NP_276066.1| hypothetical protein MTH929 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2622027|gb|AAB85427.1| unknown [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 231

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 79/287 (27%), Gaps = 64/287 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++++++WN+N                R +     L  Y   L+ D  F QE+        
Sbjct: 2   ELKVLTWNLN----------------RASYRRRKLWSYMGELEFDAGFFQEV-------- 37

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                                  +       + + K  +    +   L  + +       
Sbjct: 38  -----------YMIPNEVRWNYHTFRGEMNTLLLHKDLMLDSMKRNYLEISDNHCIEDFY 86

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   +EI G  + +  I+                     S+    L ++I + ++  
Sbjct: 87  ---VSCRIEIGGNSLSLFSIYNYIGPADSD-----------FSEFLDLLYNYIEEGED-- 130

Query: 203 VPFVIAGDFNRKINYLGNNDDF------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
              +I GDFN   N+  +                        +E++           K  
Sbjct: 131 -LIIIGGDFNINKNFSPSLRRLALLAEEMTGRLSELGFRDVLREEEDPFTFMTPNGGKYQ 189

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           IDY  + +      +            +I     RLSDH P+ +  +
Sbjct: 190 IDYLFVPEGVKILDVWHP------PAGEIIETRPRLSDHIPLMVTLE 230


>gi|149176315|ref|ZP_01854930.1| exodeoxyribonuclease III [Planctomyces maris DSM 8797]
 gi|148844917|gb|EDL59265.1| exodeoxyribonuclease III [Planctomyces maris DSM 8797]
          Length = 214

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/246 (12%), Positives = 65/246 (26%), Gaps = 36/246 (14%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           LR+  +    D++ L E  +     +                  H      +  +  I  
Sbjct: 2   LRELIQGRSPDVICLTEAQAGLLPDR-----------------GHLIESDPDFGYPLIKG 44

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           R+K +      +  +   D       R    +        +  + + +       S    
Sbjct: 45  RRKVLLWSSLPWNDVSIHDDLGFPSGRIVSGVT-----GGVRFVGVCIPWSAAHVSGGRK 99

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                         LK+ +++      P ++ GDFN+ I         ++ +    SL  
Sbjct: 100 DRNIWEDHLLYLDALKELLSELMSQD-PLIVTGDFNQWIPKARQPKYAYEKLKEVLSLGL 158

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                               ID+ V   +     ++    + +         G  LSDH 
Sbjct: 159 ELHTAGPLG-----PDGDQLIDHLVTTPDQQVKNLEVLAKKTV--------EGMNLSDHY 205

Query: 297 PISIDY 302
            I  + 
Sbjct: 206 GICAEI 211


>gi|260462359|ref|ZP_05810567.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
 gi|259031853|gb|EEW33121.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
          Length = 336

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 76/305 (24%), Gaps = 69/305 (22%)

Query: 10  VFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSD---YTLLRQYAKNLD 65
           + F +   A+    + RL  W +  +++     ++         D      +       +
Sbjct: 63  LLFAIASVATTMSTLPRL--WPVQAVAKPVDQIVYHLLQMNLRYDNPTPKKVLSLIGRTN 120

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D++ L E+ +       +  + +           +       +    +A+  +      
Sbjct: 121 PDVITLDEVSAMWETELGYITSAY----------PYRILCPYPNGVFGVALLSRRPF--- 167

Query: 126 QSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
                  A DS      R A+    V+  G  + V  IHL                    
Sbjct: 168 -------AADSAPHCEPRGAMAIATVDFGGTAVNVAAIHLSWPWP------------REQ 208

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           + Q   L + I+         ++AGD N               +     L   P      
Sbjct: 209 NWQIGELSNSISSL---GETAIMAGDCNAVPWSAAVRR-----VASLGGLTVMP--SAGP 258

Query: 245 CNANKNLRNKIP------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 L + +       ID                                  SDH P+
Sbjct: 259 TWLYIKLPDVLRRFAGLPIDQVFSKGG--------------VTVHSATRLEDTGSDHLPV 304

Query: 299 SIDYD 303
            +++ 
Sbjct: 305 LVEFS 309


>gi|254580459|ref|XP_002496215.1| ZYRO0C13222p [Zygosaccharomyces rouxii]
 gi|238939106|emb|CAR27282.1| ZYRO0C13222p [Zygosaccharomyces rouxii]
          Length = 500

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/367 (10%), Positives = 86/367 (23%), Gaps = 100/367 (27%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYN 78
            A   R +++N+N L        + N           +       +ADI+  QE+    +
Sbjct: 12  AADACRFLTFNVNGLRTLFHYQPFSNMN-------QSIENVFDYFNADIITFQELKVERS 64

Query: 79  AVAKVFPKNTWCIFYS-TERLINHSKRDSNNDI----------------------HTAIA 115
           A+ K    + +  F S  +    +S       I                         + 
Sbjct: 65  ALTKWGKLDNFYSFISIPQARKGYSGVGCWIRILPKDHPLHNSLKVIKAEEGITGRLGVK 124

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           + K  V     S   +G  +S      + A+++  E     + +    +    +  +   
Sbjct: 125 IGKDLVTYSSDSSIGIGGYESLPYNDEQEALKIDSEGRSVMVELASNTVVICVYCPANST 184

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------------- 216
                     +  + L   I          V+ GD N   +                   
Sbjct: 185 LSEEGELFRVKFLKILFKRIRNLDAMGKKVVLMGDLNVCRDLIDHAESLERASMPITDNM 244

Query: 217 --------------------YLGNNDDFWKTIDPNDSLIRFPKE---------------- 240
                                + +   F + +  +       +                 
Sbjct: 245 GGLEIEEKFQNSCRDFIINPDVPHRRLFNQMLSDSMFSEMALEGVLIDTTRLKQSRKRLK 304

Query: 241 ---KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                +    ++       ID+ +        +   +                  SDHCP
Sbjct: 305 MYTVWNTFKNSRPANYGSRIDFVLTSTRMGVQVQSANIL-----------PQVMGSDHCP 353

Query: 298 ISIDYDF 304
           +  D  +
Sbjct: 354 VYADIIY 360


>gi|323450905|gb|EGB06784.1| hypothetical protein AURANDRAFT_71945 [Aureococcus anophagefferens]
          Length = 1309

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/369 (11%), Positives = 77/369 (20%), Gaps = 102/369 (27%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A       ++ WN+  L              R T +   +R +     AD+VFL E+
Sbjct: 19  ATLAPRGDPRTIICWNVENL------------KSRATQNRREVRDFLGACGADVVFLSEV 66

Query: 75  G-----------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---I 114
                             +   V   F  +        +     +   S  D   A    
Sbjct: 67  KLAAHCDKGAKKGDGAPRNRRRVNDKFHDDKVQCAALLDVGPFAAPIYSLADWRYAGTCC 126

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +R        +             A N  A     + +G+ I +    L          
Sbjct: 127 LLRSDGP--APRRVSFSLEPPDAPPARNSVAFADDHDPDGRVIVLEYETLVVLHTYSPNN 184

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW--------- 225
              + S          ++ +    +      V  GD N        +   W         
Sbjct: 185 GNDAKSFERRRLWEAKVRAFAEAVRVRGRSLVYVGDLNCAPTDDDLSHPAWFRAWNSNQP 244

Query: 226 -KTIDPNDSLIRFPKEKDSRCNA------------------------------------N 248
            K +  +   +    E    C                                       
Sbjct: 245 GKRLGKDRERLEADDEGQPGCTPRESRYFDALLRAGGLFDAFRDARGAGAGAATIEGPHF 304

Query: 249 KNLRNK---------------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                                + ID+ ++           +          +   G   S
Sbjct: 305 SWRGPPGRDGLPETGRYYGKGMRIDHALVS-------TGVAVESCDLLGRGVGRDGFMGS 357

Query: 294 DHCPISIDY 302
           DHCP+ +  
Sbjct: 358 DHCPLRLVL 366


>gi|326777883|ref|ZP_08237148.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326658216|gb|EGE43062.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 373

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 70/284 (24%), Gaps = 68/284 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S    + +VS N+N  +     +                 +      ADI+ L+E+   +
Sbjct: 156 SGGGGLTVVSHNVNEGNTDPAGT----------------ARSLVGAGADILALEELSDAS 199

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A               T      +    ++ +   + +  +      ++ P++       
Sbjct: 200 A---------------TVYSRELAASFPHHAVIGGVGIWSRYPLADVEAVPIMPWTR--- 241

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                 A+          + V   HL S     +   T     +               +
Sbjct: 242 ------ALRATARTPDGPVAVYAAHLASVRVSAAGFTTDRRDAAAREL-------AAALR 288

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            E     V+ GDFN        +           S  R   +              + ID
Sbjct: 289 AEPAPRVVLLGDFNGTY----LDGALAPVTSQLRSAQREAGDGLGFTWPAVFP--VVRID 342

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ++       +   +   +              SDH P++   
Sbjct: 343 DVLVRG-----MTPRAAWTLPAT----------GSDHLPVAATL 371


>gi|218680204|ref|ZP_03528101.1| Endonuclease/exonuclease/phosphatase [Rhizobium etli CIAT 894]
          Length = 208

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 61/224 (27%), Gaps = 22/224 (9%)

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFS 138
           ++   P +    F ++   + + +     +   A  VRK +  + Q   +       +  
Sbjct: 5   ISAALPGHDGFFFPTSRGELFNGETAIAAEFGLATFVRKSHSVIAQGLDFVHGSFSANGW 64

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R      + +  +++             D          +   +QA  L   I + 
Sbjct: 65  GDHPRPRNAHCIRVFSRELASSLTIAHMHGLRD---PAGKSDTAAREEQAAALVALIERI 121

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                  V+ GDFN   +        +  +   +               +  L+     D
Sbjct: 122 WPGNEGLVVCGDFNILPDS-----ATFPILARLELSDLVTGNGLVDTRTSYYLKQGRFAD 176

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y ++             +   +   +       +SDH  + +D 
Sbjct: 177 YMLVTP---------GVNIARFEVVETPE----VSDHRALLLDI 207


>gi|158428909|pdb|2J63|A Chain A, Crystal Structure Of Ap Endonuclease Lmap From Leishmania
           Major
 gi|158428910|pdb|2J63|B Chain B, Crystal Structure Of Ap Endonuclease Lmap From Leishmania
           Major
          Length = 467

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 86/335 (25%), Gaps = 88/335 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----MGSYNAV 80
           + ++WN+  L                  + + LR + +    D++ LQE    +   +A 
Sbjct: 151 KFITWNVAGLRGL------------LKKNASALRAFMEAEKPDVLCLQETKLNVDEADAN 198

Query: 81  AKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           A +   + +            +S   +     T +   K       + + L     + + 
Sbjct: 199 ATLGVVDGYSFVDHPCAFKRGYSGTRTYMKNSTTV---KGLHARCTRGFALPSEPQADAA 255

Query: 140 AGNRRAVELLVEINGKKIWVL------------------DIHLKSFCFLDSLENTYSPSC 181
           AG+R  VE   +  G+ +                          S   L  L        
Sbjct: 256 AGSRVLVEGAGDEEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFD 315

Query: 182 SLLSQQAQWLKDWITQKK-----------ESLVPFVIAGDFNRKINYLGNNDD------- 223
             + +    L  W T+              S   F+ AGD N                  
Sbjct: 316 PSMREYLHRLDTWATENAAVPSAAAMGSGSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQ 375

Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                       F +T+   +S+  F +              +           +DYFV+
Sbjct: 376 ECSGFAPEERMSFRETMQRTNSVDIFRQLYPQAGPVYSFWSQRINGRPRNLGWRLDYFVV 435

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            Y  D         SDHCP
Sbjct: 436 SSRLAS-----------YVVDCFPMPTVMGSDHCP 459


>gi|157867185|ref|XP_001682147.1| AP-endonuclease; apurinic/apyrimidinic endonuclease-redox protein
           [Leishmania major]
 gi|2393785|gb|AAD11457.1| AP-Endonuclease [Leishmania major]
 gi|68125599|emb|CAJ03609.1| apurinic/apyrimidinic endonuclease-redox protein [Leishmania major
           strain Friedlin]
          Length = 447

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 86/335 (25%), Gaps = 88/335 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----MGSYNAV 80
           + ++WN+  L                  + + LR + +    D++ LQE    +   +A 
Sbjct: 131 KFITWNVAGLRGL------------LKKNASALRAFMEAEKPDVLCLQETKLNVDEADAN 178

Query: 81  AKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           A +   + +            +S   +     T +   K       + + L     + + 
Sbjct: 179 ATLGVVDGYSFVDHPCAFKRGYSGTRTYMKNSTTV---KGLHARCTRGFALPSEPQADAA 235

Query: 140 AGNRRAVELLVEINGKKIWVL------------------DIHLKSFCFLDSLENTYSPSC 181
           AG+R  VE   +  G+ +                          S   L  L        
Sbjct: 236 AGSRVLVEGAGDEEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFD 295

Query: 182 SLLSQQAQWLKDWITQKK-----------ESLVPFVIAGDFNRKINYLGNNDD------- 223
             + +    L  W T+              S   F+ AGD N                  
Sbjct: 296 PSMREYLHRLDTWATENAAVPSAAAMGSGSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQ 355

Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                       F +T+   +S+  F +              +           +DYFV+
Sbjct: 356 ECSGFAPEERMSFRETMQRTNSVDIFRQLYPQAGPVYSFWSQRINGRPRNLGWRLDYFVV 415

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            Y  D         SDHCP
Sbjct: 416 SSRLAS-----------YVVDCFPMPTVMGSDHCP 439


>gi|213420904|ref|ZP_03353970.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E01-6750]
          Length = 144

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 36/142 (25%), Gaps = 37/142 (26%)

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYL---------------------GNNDDFWKTID 229
           L++++  + +   P +I GD N     L                         ++   + 
Sbjct: 8   LQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLL 67

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILY 280
               +  F +      +       +           ID  +      +   +        
Sbjct: 68  KWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI----- 122

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
             D      ++ SDH P+   +
Sbjct: 123 --DYDIRSMEKPSDHAPVWATF 142


>gi|226294616|gb|EEH50036.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides
           brasiliensis Pb18]
          Length = 621

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/301 (9%), Positives = 58/301 (19%), Gaps = 68/301 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIF--------YSTERLINHSKRDSNN 108
                L+ADIV  QE  +   +    +   N W  +         S    I   +  +  
Sbjct: 32  AMFDALEADIVIFQEAKVQKKDLQDDMVLVNGWDWYSGVVIYTRNSKCCPIRAEEGITGI 91

Query: 109 DIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 +       +   +  P       +          +       +   + +   +F
Sbjct: 92  LCPPGSSSTSPFPALTSFRDMPEEQQIGGYPTPEQLALSNIDAATLDSEGRCVILEFPAF 151

Query: 168 CFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--------- 216
             L                      +   +          ++ GD N   +         
Sbjct: 152 VLLGVYCPANRDEMRDGFRKAFVNAVDARVRNLVGMGKRVILTGDLNISGSEIDSARALE 211

Query: 217 -------------YLGNNDDFWKTIDPND-------------SLIRFPKEKDSRCNANKN 250
                               F + +                  +    +    R      
Sbjct: 212 EIRKGTTTNSEFVSAPVRRIFNQLVSGGKVIGDRDQGRETPVLVDLCREYHPDRRGMYTC 271

Query: 251 L---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                          IDY +       +    +              G   SDHCP+  D
Sbjct: 272 WEQRVNARPGNYGSRIDYVLCSLIMRDWFCASNIQ-----------EGLMGSDHCPVYAD 320

Query: 302 Y 302
            
Sbjct: 321 I 321


>gi|158297726|ref|XP_317916.4| AGAP011401-PA [Anopheles gambiae str. PEST]
 gi|157014715|gb|EAA13001.5| AGAP011401-PA [Anopheles gambiae str. PEST]
          Length = 406

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/235 (11%), Positives = 59/235 (25%), Gaps = 16/235 (6%)

Query: 23  KVRLVSWNI---NTLSEQEGVSLWKNSVKR-TTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+++NI   + L     +    +            L      +  DI+ +QE+   +
Sbjct: 11  EFTLMNYNILAQDLLDSHAALYGEHDPEGLPWDLRCKRLLAEINTIKPDILCVQELQETH 70

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A +              +R  N      +     A+  R+    ++              
Sbjct: 71  AESFCSGLPQHYAMLYKKRTGN------DKTDGCALFYRRDLFELVTHHKVEFYQPKVNK 124

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWIT 196
                 A+   + +       L I      +    ++       +L  +   L     + 
Sbjct: 125 LNRENVAIIAKLALKANPRAKLVISTTHLLYNPRRQDVRLAQVQVLLAELDRLAFSGTMP 184

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                  P ++ GDFN +             +       R         N+    
Sbjct: 185 NGIPRYEPVILCGDFNLQPFTAPYELLTKGFL----RYDRLDSRSLQPANSWHGH 235


>gi|154276646|ref|XP_001539168.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414241|gb|EDN09606.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1913

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 78/289 (26%), Gaps = 67/289 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++R++ +N+                K        L Q  K LD DI+ +QE      + 
Sbjct: 644 QELRILQYNVW---------------KSRDVVLASLFQNRKILDYDILAIQEPWRNPFIE 688

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             +         +                   + + K+          +     S     
Sbjct: 689 TSYHPLKAQFQLTYLANAA---------TRVCLYISKRINPGTWSVSYISKDIISLQILN 739

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                      +G+K+ V +++ +                  LS  A+ ++        S
Sbjct: 740 P---------HSGRKVSVFNVYNEVGT-------------DTLSTMAEAIRAL-----NS 772

Query: 202 LVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKE-----KDSRCNANKNLRNKI 255
               ++ GDFN     +   +    +       L    +             ++    + 
Sbjct: 773 PEDIIVLGDFNLHHPLWSSTHRHGGRGPSAQGLLTVIEEFQLQLLTKPGTPTHRWKDGES 832

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            ID     ++    +        +  +          SDH PI++ +D+
Sbjct: 833 TIDLTFASEDLADRVTHCKVDREVDCD----------SDHLPIALVFDW 871


>gi|307286767|ref|ZP_07566853.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0109]
 gi|306502245|gb|EFM71529.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0109]
 gi|315165181|gb|EFU09198.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1302]
          Length = 274

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFY------- 93
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPVATQTPVHEDNFAYLIVQYLAEK 82

Query: 94  -STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQHYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLATGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVQKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|270291535|ref|ZP_06197756.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
 gi|304385999|ref|ZP_07368340.1| endonuclease/exonuclease/phosphatase [Pediococcus acidilactici DSM
           20284]
 gi|270280032|gb|EFA25869.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
 gi|304327922|gb|EFL95147.1| endonuclease/exonuclease/phosphatase [Pediococcus acidilactici DSM
           20284]
          Length = 300

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 87/320 (27%), Gaps = 83/320 (25%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S    +R+ ++N+              + K+  ++        +N   +I   QE+   N
Sbjct: 27  SANTTIRVGTYNLR-------------APKKNDTNKQK--DLLENDQVEIAGTQEINYKN 71

Query: 79  AVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                  K      +  +   N  +S           IA          ++  L  ++  
Sbjct: 72  HRFSGKSKYNTLTNFKDDYFKNIFYSNAIDFAGGGYGIATVSALPLKDSKTVKLYSSEAG 131

Query: 137 FSRA--------------------------------GNRRAVELLVEINGKKIWVLDIHL 164
                                                 R     ++E +GKKI   + HL
Sbjct: 132 KHLQKLKKAYREYNPDKKSTVKNLDKLTAKYGKKLVEPRVYQRSVIEKDGKKIAFYNTHL 191

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
                          S  +  +Q + L   +   K++    V+ GDFN   N        
Sbjct: 192 SY------------ESTKIRQKQFKALAKAMR--KDNTPYKVLVGDFNADQNTTE----- 232

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
           WKT   N ++              ++   N   ID  +  +N               +  
Sbjct: 233 WKTFKKNFNITNGKDGIWRDTFIGEDPTMNVNSIDNIITSKNI--------------SIS 278

Query: 284 DIKSRGKRLSDHCPISIDYD 303
           +I +     SDH P+  D  
Sbjct: 279 NIHTIKSTASDHVPLVADLT 298


>gi|332231963|ref|XP_003265167.1| PREDICTED: protein angel homolog 2 isoform 2 [Nomascus leucogenys]
          Length = 418

 Score = 58.0 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 40  DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 99

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +       D   
Sbjct: 100 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISL 154

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      + C  ++          +   Q   L   I+  
Sbjct: 155 LDRDNVGLVLLLQPK-----IPYAASPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 209

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 210 AHQKDGSFCPIVMCGDFNSVPGSPLY 235


>gi|307095032|gb|ADN29822.1| salivary inositol polyphosphate 5-phosphatase [Triatoma
           matogrossensis]
          Length = 316

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/340 (11%), Positives = 84/340 (24%), Gaps = 67/340 (19%)

Query: 1   MIRKYVLALVFFLVPC------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M  K +L   F  +         +++ + V   +WN+             +         
Sbjct: 1   MNLKILLLFSFVCLVSIHAKDANSALPRTVYAATWNV----------GEGDPPGTVKELL 50

Query: 55  TLLRQYAKNLDADI--VFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
             +    +  + DI  + LQE+    +  A+ +            +       K +S   
Sbjct: 51  GQISSSYEA-NPDIVIIGLQEVSMNPTTAAIQQSKWTKKIDDALKSSNNYVKVKSESLLG 109

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           +   + V+ K  +                + GN+  V +   +N +   +++ HL +   
Sbjct: 110 MLLKVYVKVKFGQSFDSEDAATVMTGQGGKFGNKGGVIIKFHLNNQGYCIVNSHLPAHDG 169

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKT 227
                       +   +             +        GD N ++    N D       
Sbjct: 170 KLPERIKDYKLINAKRE---------GFCGKKSDYIFWLGDLNFRLTDEKNLDANKILDL 220

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRN-------------------------KIPIDYFVM 262
           I+ N       K++      +                                  D  + 
Sbjct: 221 INQNKLTDLLQKDELINNKGSVFTDFTEKEIKFAPTFKLKKGKGEYKLERRPAWTDRVLW 280

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +  K +                    R SDH P+   +
Sbjct: 281 KSDTSKKITS---------TLYTSVTSYRESDHYPVQAQF 311


>gi|119613771|gb|EAW93365.1| angel homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
          Length = 465

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 87  DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 146

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +       D   
Sbjct: 147 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISL 201

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      + C  ++          +   Q   L   I+  
Sbjct: 202 LDRDNVGLVLLLQPK-----IPYAACPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 256

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 257 AHQKDGSFCPIVMCGDFNSVPGSPLY 282


>gi|121608588|ref|YP_996395.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2]
 gi|121553228|gb|ABM57377.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2]
          Length = 266

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/281 (10%), Positives = 76/281 (27%), Gaps = 71/281 (25%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
           L  +      D + +QE+ +  A       ++     +                +    +
Sbjct: 20  LESWLAATRPDCICVQEVKAQAADLADRFERLADLQGY-------------FHLAEKKGY 66

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
           + + V  ++    + +       D+  R      +EL  +   +K+ ++  +  S     
Sbjct: 67  SGVGVYTRHEPSDRVAGYGSPEFDAEGRY-----LELRFDTPARKLSIISAYFPSGSSGP 121

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------- 223
             +       +        L+            F++ GD N     +   +         
Sbjct: 122 LRQQAKFRFLAEFHPHLMRLRA--------EREFILCGDINIAHQTIDLKNWRSNQKNSG 173

Query: 224 -----------FWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNK---------IPIDYFVM 262
                           D N  +  + + +    +       N+           +DY   
Sbjct: 174 FLPEERLWMTNLLDVNDKNGVIDVYRRLQPCATDTAYTWWSNRGRAYANNVGWRLDY--- 230

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      + +           +G++ SDH PI++DY+
Sbjct: 231 --------HLATPALAALARAQSIYKGEKFSDHAPITVDYE 263


>gi|168059759|ref|XP_001781868.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666675|gb|EDQ53323.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 591

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/353 (12%), Positives = 94/353 (26%), Gaps = 87/353 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +R+V++N+ +L         +    RT      L+ +  +L++DI+ LQE  +      A
Sbjct: 1   MRIVTYNVFSLRA-------RLVPPRT------LKSFLDSLESDIICLQETKLTRQELTA 47

Query: 82  KVFPKNTWCIFYSTERLINHSKR-------DSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           ++   + +  F+S  R ++  +                 +A  +        ++      
Sbjct: 48  EIAVADGYESFFSCTRTVSKGRVRYSGVATFCRTPTAVPVAADEGFTGAQSSTHQTNYKN 107

Query: 135 DSFSRAGNRRAV---------ELLVEINGKKIWVLDIHLKSFC-FLDSLENTYSPSCSLL 184
           D          +          L ++  G+ +         F  +  S+           
Sbjct: 108 DHARVGCYEEVLNMENMSRQDLLQLDWEGRCLVTDHGSFVLFNLYGPSVGPDNEERYEFK 167

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP 230
            +  + L++      ++    +  GDFN                 +       F   +  
Sbjct: 168 LRFYRALQNRWEGLLKNGRRVIAVGDFNISPFPIDSCHSDSNPDFDKSSIRQWFRSQLRA 227

Query: 231 ND--SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVM------------DQNAY 267
           N    +  F +    R  A                  +D  +               +  
Sbjct: 228 NGGPFVDVFREIHPIREGAYTFWNQMSGSEEFNYGTRLDLIIAAGGCFHQVRSEESNSLL 287

Query: 268 KFLIQESFSE------------ILYNEDDIKSRG------KRLSDHCPISIDY 302
           K      F                +  D +  RG         SDH P+ +  
Sbjct: 288 KAEESHHFGTCEVEDCDILLEFKRFKADSVPRRGGEKTQKLDGSDHVPVYVQL 340


>gi|115402641|ref|XP_001217397.1| hypothetical protein ATEG_08811 [Aspergillus terreus NIH2624]
 gi|114189243|gb|EAU30943.1| hypothetical protein ATEG_08811 [Aspergillus terreus NIH2624]
          Length = 592

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 65/302 (21%), Gaps = 70/302 (23%)

Query: 60  YAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAV 116
             + L+ADIV  QE  +   +    +     W  ++S       +S         T   +
Sbjct: 1   MFEILEADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPRVKKGYSGVVIYTRNSTCAPI 60

Query: 117 R----------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
           R            N     +  P       +        +EL       +   + +   +
Sbjct: 61  RAEEGLTGVLCPPNSSTPFRDLPEDQQIGGYPAIEQLSQLELDAATLDSEGRCVILEFPA 120

Query: 167 FCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFN------------ 212
           F  L                      +   +          V+ GD N            
Sbjct: 121 FVLLGLYCPANRDESRDSFRQSFLDLMDTRLRNLVAMGKRVVVTGDLNISAREIDQAPAA 180

Query: 213 ----------RKINYLGNNDDFWKTIDPND------------------SLIRFPKEKDSR 244
                                F + +                       +    ++    
Sbjct: 181 EAIRKGTLTEDDFVSAPARRLFNQLLFEGKVLGQRDEGREQPVLHDICRMFHPDRKGMYT 240

Query: 245 CN----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           C       +       IDY +   +   ++   +              G   SDHCP+  
Sbjct: 241 CWEQRINARPGNYGSRIDYVLCSLDMRDWIEDSNIQ-----------EGLMGSDHCPVYA 289

Query: 301 DY 302
            +
Sbjct: 290 IF 291


>gi|118098792|ref|XP_415287.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 1011

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 92/318 (28%), Gaps = 40/318 (12%)

Query: 11  FFLVPCTASVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           F   P TA+     R  +V+WN+ T      V+   +     T+D  ++           
Sbjct: 274 FLGCPGTAAEDGAFRITVVTWNVGTAMPPNDVTSLLHLNTGETNDADMIA---------- 323

Query: 69  VFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRV 123
           + LQE+ S     +      + W   +       H    S   +   I +   +  ++  
Sbjct: 324 IGLQEVNSKINKRLKDALFTDQWSELFMDVLSPFHFVLVSTVRMQGVILLVFAKYYHLPF 383

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           LQ               GN+  V + + I G  +  L+ HL +       +         
Sbjct: 384 LQDIQTDCTRTGLGGYWGNKGGVSVRLSIFGHMVCFLNCHLPA----HLEKAEQRKEDFA 439

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDF---NRKINYLGNNDDF------WKTIDP-NDS 233
                Q  +                GD+   N  ++ L   D        W  +    + 
Sbjct: 440 TILHMQQFEGRAASGILDHDLVFWFGDYAIDNNILSQLWEKDQLNIAKSTWPVLSGFQEG 499

Query: 234 LIRFPKEKDSRCNANKNL-----RNKIPIDYFVM---DQNAYKFLIQESFSEILYNED-D 284
            + FP         NK       R     D  +      ++     + S   +  ++   
Sbjct: 500 PLNFPPTFKFDVGTNKYDSSAKKRKPAWTDRILWKIKSPSSGAGGRRPSRGVLSVSQLCY 559

Query: 285 IKSRGKRLSDHCPISIDY 302
                  +SDH P++  +
Sbjct: 560 CSHMEYTVSDHKPVAAIF 577


>gi|238505976|ref|XP_002384190.1| DNA lyase, putative [Aspergillus flavus NRRL3357]
 gi|220690304|gb|EED46654.1| DNA lyase, putative [Aspergillus flavus NRRL3357]
          Length = 630

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 73/331 (22%), Gaps = 70/331 (21%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNT 88
           ++    +     ++    + T +  + +   + L+ADIV LQE  +   +    +     
Sbjct: 12  VSHYDVERNPFAYEPWRGKRTFEAEMQKAMFEILEADIVVLQETKIQRKDLRDDMVLVPG 71

Query: 89  WCIFYS-TERLINHSKRDSNNDIHTAIAVR----------KKNVRVLQQSYPLLGAKDSF 137
           W   +S       +S         T   +R            N  V  +  PL      +
Sbjct: 72  WDCHFSLPRSKKGYSGVVIYTRNATCAPLRAEEGLTGVLCPPNSSVPFRDLPLDRQIGGY 131

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQAQWLKDWI 195
                   +EL       +   + +   +F  L                      +   I
Sbjct: 132 PTTEQLSTLELDAATLDSEGRCVILEFPAFVLLGLYCPANRDESRDSFRQGFLDLMDARI 191

Query: 196 TQKKESLVPFVIAGDFNRKIN----------------------YLGNNDDFWKTI----- 228
                      + GD N                                 F + +     
Sbjct: 192 RNLVAMGKRVFVTGDLNISRGEIDAAHASEAIRKGTTTEDEFISAPARRLFNQLVYSGKV 251

Query: 229 --------DPNDSLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFLI 271
                   +             +R                     IDY +   N   +  
Sbjct: 252 IGERDEGREQPALFDICRSFHPNRRGMYTCWEQKINARPGNYGSRIDYVLCSLNMQDWFC 311

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +                G   SDHCP+   +
Sbjct: 312 ESDIQ-----------EGLMGSDHCPVYAIF 331


>gi|149642963|ref|NP_001092580.1| protein angel homolog 2 [Bos taurus]
 gi|158706418|sp|A6H7I3|ANGE2_BOVIN RecName: Full=Protein angel homolog 2
 gi|148877303|gb|AAI46258.1| ANGEL2 protein [Bos taurus]
 gi|296478861|gb|DAA20976.1| protein angel homolog 2 [Bos taurus]
          Length = 544

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 65/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 166 EFSVMSYNILSQDLLEDNSHLYKHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 225

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++       +  R        AI  +     +L  +      +D   
Sbjct: 226 YGTEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFYRRDVPL 280

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      + C  ++          +   Q   L   I+  
Sbjct: 281 LDRDNVGLVLLLQPK-----IPSATSPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 335

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 336 AHQKDGRFCPIVMCGDFNSVPGSPLY 361


>gi|47227637|emb|CAG09634.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 553

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/350 (10%), Positives = 88/350 (25%), Gaps = 69/350 (19%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA- 79
              ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +    
Sbjct: 183 TFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEITNCDADIISLQEVETEQYY 242

Query: 80  --VAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
               +   +  +  ++         S +   +     S         V+K  V   Q + 
Sbjct: 243 TLFLETLKERGYDGYFCPKSRAKLVSEQERKHVEGCASFFKTEKFTLVQKHTVEFNQVAM 302

Query: 129 PLLGAKDSFSRA---GNRRAVELLVEINGKKI----------WVLDIHLKSFCFLDSLEN 175
                 +         +   V +L+E+N               ++ +      +     +
Sbjct: 303 ANSEGSEVMLNRVMTKDNIGVAVLLEVNKDMFSGGMKAPQERQLVLVANAHMHWDPEYSD 362

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLV--------PFVIAGDFNRKINY---------- 217
                  +   + + + +  +    +          P V+  D N   +           
Sbjct: 363 VKLIQTMMFLSELKSIAERASGSVATGSPTSDPSAIPIVLCADLNSLPDSGVVEYLSNGG 422

Query: 218 -LGNNDDFWKTIDPNDSLIRFPKEKDSRC--------------------NANKNLRNKIP 256
              N+ DF +              K+                         N     K  
Sbjct: 423 VADNHKDFKELRYNECLTNFSCNGKNGNSDGSITHSFQLKSAYNSNLMPYTNYTYDFKGV 482

Query: 257 IDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           I+ F   +   +    L   +   +  N           SDH  +    +
Sbjct: 483 INNFFFSKTNLSVLGLLGPLNSQWLANNNITSCPNPHIPSDHFSLLAQLE 532


>gi|158301112|ref|XP_320865.4| AGAP011644-PA [Anopheles gambiae str. PEST]
 gi|157013484|gb|EAA00417.4| AGAP011644-PA [Anopheles gambiae str. PEST]
          Length = 453

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 84/316 (26%), Gaps = 55/316 (17%)

Query: 26  LVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMGSY--NAV 80
           +V+WN++T   E   ++       R   D         +   D  ++ LQE+ +   N +
Sbjct: 14  IVTWNVSTKFPENISLNKLLGLENRPEQD---------SHLPDFFVIGLQEVNAQPQNTL 64

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLLGAKDS 136
             +F  + W   +               +    + +    R+K++  L+Q          
Sbjct: 65  YNLFKDDLWTQKFKEVLKE-RDYVVIKTEQMQGLLLSVFARRKHLLHLRQVETEYTRTGL 123

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               GN+ AV + + + G  I +++ HL +             +      Q Q       
Sbjct: 124 GGIWGNKGAVSIRMNVYGSSICLVNAHLAA----HDHMLEERINDYERIVQEQKFHVKAK 179

Query: 197 QKKESLVPFVIAGDFNRKIN-----YLGNNDDF------------------------WKT 227
           +           GD N ++                                      +  
Sbjct: 180 ETIFDHDYVFWFGDLNFRLTGEATTSADEIRAMVARDELKQLIEKDQLLLVRREGRAFAQ 239

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +           + +   N     R     D  +    A       +             
Sbjct: 240 LQERLPQFPPTFKFEHGSNEYDMKRRPAWTDRILY---AVNENNYRNVRLTAEQTSYKSH 296

Query: 288 RGKRLSDHCPISIDYD 303
               +SDH P++ ++ 
Sbjct: 297 PSYSISDHKPVTSEFT 312


>gi|182437262|ref|YP_001824981.1| hypothetical protein SGR_3469 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178465778|dbj|BAG20298.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 347

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 70/284 (24%), Gaps = 68/284 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S    + +VS N+N  +     +                 +      ADI+ L+E+   +
Sbjct: 130 SGGGGLTVVSHNVNEGNTDPAGT----------------ARSLVGAGADILALEELSDAS 173

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A               T      +    ++ +   + +  +      ++ P++       
Sbjct: 174 A---------------TVYSRELAAAFPHHAVIGGVGIWSRYPLSDVEAVPIMPWTR--- 215

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                 A+          + V   HL S     +   T     +               +
Sbjct: 216 ------ALRATARTPDGPVAVYAAHLASVRVSAAGFTTDRRDAAAREL-------AAALR 262

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
            E     V+ GDFN        +           S  R   +              + ID
Sbjct: 263 AEPAPRVVLLGDFNGTY----LDGALAPVTSQLRSAQREAGDGLGFTWPAAFP--VVRID 316

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ++       +   +   +              SDH P++   
Sbjct: 317 DVLVRG-----MTPRAAWTLPAT----------GSDHLPVAATL 345


>gi|154272351|ref|XP_001537028.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150409015|gb|EDN04471.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1753

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 79/289 (27%), Gaps = 67/289 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++R++ +N+                K        L Q  K LD DI+ +QE      + 
Sbjct: 484 QELRILQYNVW---------------KSRDVVLASLFQNRKILDYDILAIQEPWRNPFIE 528

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             +         +                   + + K+          +     S     
Sbjct: 529 TSYHPLKAQFQLTYLANAA---------TRVCLYISKRINPGTWSVSYISKDIISLQILN 579

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                      +G+K+ V +++ +                  LS  A+ ++        S
Sbjct: 580 P---------HSGRKVSVFNVYNEVGT-------------DTLSTMAEAIRAL-----NS 612

Query: 202 LVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKE-----KDSRCNANKNLRNKI 255
               ++ GDFN     +   +    +       L    +       +     ++    + 
Sbjct: 613 PEDIIVLGDFNLHHPLWSSTHRHGGRGPSAQGLLTVIEEFQLQLLTEPGTPTHRWKDGES 672

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            ID     ++    +        +  +          SDH PI++ +D+
Sbjct: 673 TIDLTFASEDLADRVTHCKVDREVDCD----------SDHLPIALVFDW 711


>gi|154311124|ref|XP_001554892.1| hypothetical protein BC1G_06680 [Botryotinia fuckeliana B05.10]
 gi|150851084|gb|EDN26277.1| hypothetical protein BC1G_06680 [Botryotinia fuckeliana B05.10]
          Length = 498

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/347 (10%), Positives = 74/347 (21%), Gaps = 87/347 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMGSYNA 79
            ++ +++ N   L         K          T + +   +      IV LQE  +   
Sbjct: 9   NEINVITLNCWGL---------KFISDLRNERLTEIGKAIGSASPTPHIVGLQECWTQED 59

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAK 134
              +  +    + Y                    +A+  K        +         A 
Sbjct: 60  YKSIRKETKHILPYGKFYHSGIFGG--------GLAILSKWPIEESSMFRYPLNGRPTAF 111

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   +      +        ++++           E   S  C   + QA  +   
Sbjct: 112 FRGDWFVGKGVAGARIRYGKGPKDIMEVFTTHLHAPYETEPNDSYIC-HRTAQAWEIAKL 170

Query: 195 ITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDP---------------- 230
           +    E     +  GDFN           +      D W  + P                
Sbjct: 171 MRGAAERGHLVLGLGDFNMIPLSLAHRLISTHSPARDVWMVLHPDCSIGAAVDEVEKARR 230

Query: 231 --------NDSLIRFPKEKDSRCNANK-------------------NLRNKI-PIDYFVM 262
                   N S      +                                +   +DY   
Sbjct: 231 RPIPTAEFNLSENGATCDSVLNTWRWSKGEQKRLGPNRPEIEIPGDTPDPRAKRLDYIFA 290

Query: 263 -------DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  + +A  +++++     +            LSDH  +    
Sbjct: 291 NTCFDESNPSAGGWIVKD---VRVGMLQRHSKYQCSLSDHFSVEATL 334


>gi|222152427|ref|YP_002561602.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           uberis 0140J]
 gi|222113238|emb|CAR40741.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           uberis 0140J]
          Length = 273

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 72/277 (25%), Gaps = 54/277 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF------------------- 92
                L ++      D++ LQE+              +                      
Sbjct: 19  KKLVDLAEHILAEKYDVICLQEINQLINSELAEEDFFYRPIPGTPALHKDNFALLLVNYL 78

Query: 93  ---YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                             +  H  +A+  K       +  L+   D       RRA+   
Sbjct: 79  QKRGQHYYWSWAYNHIGYDIYHEGVAIFSKKPITA--TDILMSQVDDEHDYHTRRALLAK 136

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            EI+GK+  ++ +H+  F              + L  +   L           +P +I G
Sbjct: 137 TEIDGKETALVSLHMSWFGKGFEG------EWTTLETELNAL----------GIPLMIMG 180

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD-----SRCNANKNLRNKIPIDYFVMDQ 264
           DFN   +  G        +   DS     K        +  +  K+ +    +D+    +
Sbjct: 181 DFNNPTDLEGYQLIEASPLGLRDSHKVADKVFGDYSIVADIDGWKDNKESYKVDHAFASK 240

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     F  +             +SDH  + + 
Sbjct: 241 E---------FDILRSEITFEGGSAPVISDHFGLEVT 268


>gi|224007765|ref|XP_002292842.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971704|gb|EED90038.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 193

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 40/168 (23%), Gaps = 30/168 (17%)

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-- 219
            +L +    +S +          S    +L      +K+   P +  GD N   +     
Sbjct: 27  FYLTNVYVPNSGQKLERLGYRTNSWDKDFLTKMQQLEKDGDKPIIWVGDLNVAFDEKDTW 86

Query: 220 ---------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--------- 255
                               +        +  F                +          
Sbjct: 87  NEGAKHLAKSAGTTAEERASFAEQLGAGYIDAFRHLHPEGRGHYSYWSQRAGNREPNKGL 146

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +DYFV  +        +         D      +  SDHCPI ++ +
Sbjct: 147 RLDYFVCSKGIM----GDGDGTKAIVRDSYMVPDQLGSDHCPIVLEIE 190


>gi|296271886|ref|YP_003654517.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM
           7299]
 gi|296096061|gb|ADG92011.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM
           7299]
          Length = 224

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 78/276 (28%), Gaps = 63/276 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
               + S+N+             +  KR       L+        D + LQE       +
Sbjct: 3   HTFNIASYNLW--------KNCGDFPKRIEEIAPKLKNL------DCLCLQEDYCDKDFS 48

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                N    F      +   KRD  +   + + +  K      +         +  +  
Sbjct: 49  SSDKINKMLGFNKITLHLRVKKRD-GHKSSSNLTILSKYKVSQVEEIYF-----NKDKED 102

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R A+ + +EIN KK+ +++ HL +  F                 Q + +K  + + +  
Sbjct: 103 ERGALIIELEINNKKVIIVNTHLSNLSF------------QGRLNQIESIKYALEKYESD 150

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               +I GD N   N            +  + L  +  +                +DY  
Sbjct: 151 --IVIICGDMNANANSKEIKKIKRCGYNYVNELATYEDDLM--------------LDYIF 194

Query: 262 MDQNAYKFLIQE-SFSEILYNEDDIKSRGKRLSDHC 296
              N    +  + S  +              LSDH 
Sbjct: 195 YKSNFELKVQSKISIKD--------------LSDHY 216


>gi|260664810|ref|ZP_05865661.1| endonuclease/exonuclease/phosphatase [Lactobacillus jensenii
           SJ-7A-US]
 gi|260561293|gb|EEX27266.1| endonuclease/exonuclease/phosphatase [Lactobacillus jensenii
           SJ-7A-US]
          Length = 291

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 80/300 (26%), Gaps = 43/300 (14%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           +   ++  G      S     +D        K  + D  F QE+ + +   + F  N   
Sbjct: 6   MKNGAKTRGKYGTAVSKASELADTKGAIATIKKQNPDFAFFQEIDTNS--TRSFGVNQVK 63

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PLLGAKDSFSRAGNRRAVE 147
           +  +    +  S   + +  + A  +   +                     +     ++ 
Sbjct: 64  MAENAFDDMGSSFAQNFHSAYIAFPLNNPHGFARSGILALSKYHIDSSERRKYFVSSSLI 123

Query: 148 LLVEINGKKIWVLDIHLKSF---CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                  +   V+ + +K+      ++S  + Y        +Q   L   +  + +    
Sbjct: 124 EKFVDLDRCFNVMRLPVKNDKELVLINSHMSAYDKGGLSKKKQLALLNHVMKAEIQKGNY 183

Query: 205 FVIAGDFNRKI---------NYLGNNDDFWKTIDPNDSL-------IRFPKEKDSRCNAN 248
            +  GDFN            +    +D     +   D              +    C  +
Sbjct: 184 VICGGDFNHAFGTKYVAHFKSEQKQHDWL-AVLSQKDLASSGMRMITAQNADDVPTCRGS 242

Query: 249 KNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        +D F++  N            + YN D   +      DH P+ + + 
Sbjct: 243 DIPYKKGVTYTTIVDGFLVSPN---------VQAVSYNIDTQFAYA----DHNPVKLSFS 289


>gi|300947129|ref|ZP_07161343.1| conserved domain protein [Escherichia coli MS 116-1]
 gi|300957738|ref|ZP_07169925.1| conserved domain protein [Escherichia coli MS 175-1]
 gi|301646220|ref|ZP_07246116.1| conserved domain protein [Escherichia coli MS 146-1]
 gi|300315554|gb|EFJ65338.1| conserved domain protein [Escherichia coli MS 175-1]
 gi|300453207|gb|EFK16827.1| conserved domain protein [Escherichia coli MS 116-1]
 gi|301075557|gb|EFK90363.1| conserved domain protein [Escherichia coli MS 146-1]
          Length = 123

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 34/122 (27%), Gaps = 17/122 (13%)

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            +    Q   L +W+ +      P ++AGDFN       +       +D       F + 
Sbjct: 17  EAHRQAQLAMLAEWVNE-LPDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRA 70

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + +D   +   +                       + LSDH P+S 
Sbjct: 71  HGRPARTFPVQFPLLRLDRIYVKNASAS-----------APTALPLRTWRHLSDHAPLSA 119

Query: 301 DY 302
           + 
Sbjct: 120 EI 121


>gi|270001543|gb|EEZ97990.1| hypothetical protein TcasGA2_TC000387 [Tribolium castaneum]
          Length = 434

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 79/312 (25%), Gaps = 65/312 (20%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT---- 112
           + +  ++  ADI+ LQE+          P+     +       + +K  + ++       
Sbjct: 107 ILEEIRHYSADIINLQEVEMEQFYNYFLPELKQDGYAGIYSPKSRAKHMAESERKYVDGC 166

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV------------- 159
           AI  R     ++++           +  G    +  ++  +   +               
Sbjct: 167 AIFYRTSKFTLIKEHLVEFNQLAMANADGLDHMLNRVMPKDNIGLAALLQTTEAAWENTP 226

Query: 160 ---------LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF----- 205
                    + +      +     +       +LS + + + D   Q   +         
Sbjct: 227 ADAPFIQQPILVCTAHIHWDPEFCDVKLIQTMMLSNELKSILDKSAQALRASENVNADPN 286

Query: 206 ----VIAGDFNRKINYL--------------------GNNDDFWKTIDPNDSLIRFPKEK 241
               V+ GDFN   +                             K +  +         K
Sbjct: 287 SIQLVLCGDFNSLPDSGVIEFLSTGRVSQDHKDFKDFSYKQCLEKVLSCDKPNEFTHSFK 346

Query: 242 DSRCN-------ANKNLRNKIPIDYFVMDQNA---YKFLIQESFSEILYNEDDIKSRGKR 291
            +           N     K  IDY    +        L   S   +  N+         
Sbjct: 347 LASAYNDEIMPFTNYTFDFKGIIDYIFYAKQTMTPLGLLGPISSEWLTQNKVIGCPHPHV 406

Query: 292 LSDHCPISIDYD 303
            SDH P+ ++ +
Sbjct: 407 FSDHFPLLVELE 418


>gi|29375543|ref|NP_814697.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis V583]
 gi|227555071|ref|ZP_03985118.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis HH22]
 gi|256964213|ref|ZP_05568384.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis
           HIP11704]
 gi|257083870|ref|ZP_05578231.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Fly1]
 gi|257418552|ref|ZP_05595546.1| predicted protein [Enterococcus faecalis T11]
 gi|300859876|ref|ZP_07105964.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TUSoD Ef11]
 gi|307271968|ref|ZP_07553236.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0855]
 gi|29343003|gb|AAO80767.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis V583]
 gi|227175812|gb|EEI56784.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis HH22]
 gi|256954709|gb|EEU71341.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis
           HIP11704]
 gi|256991900|gb|EEU79202.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis Fly1]
 gi|257160380|gb|EEU90340.1| predicted protein [Enterococcus faecalis T11]
 gi|300850694|gb|EFK78443.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TUSoD Ef11]
 gi|306511474|gb|EFM80476.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0855]
 gi|315144339|gb|EFT88355.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2141]
 gi|315162982|gb|EFU06999.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0645]
 gi|315167904|gb|EFU11921.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1341]
 gi|315574128|gb|EFU86319.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0309B]
 gi|315581729|gb|EFU93920.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0309A]
          Length = 274

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFY------- 93
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPIATQTPIHEDNFAYLIVQYLAEK 82

Query: 94  -STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQHYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLATGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|6453600|emb|CAB61415.1| hypothetical protein [Homo sapiens]
          Length = 348

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/323 (11%), Positives = 78/323 (24%), Gaps = 67/323 (20%)

Query: 41  SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF-------- 92
               +           + +   N DADI+ LQE+ +        P      +        
Sbjct: 1   GYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKS 60

Query: 93  ----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA---GNRRA 145
                S +   +               V+K  V   Q +       ++        +   
Sbjct: 61  RAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIG 120

Query: 146 VELLVEINGKKI------------WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           V +++E++ +               +L +      +     +       +   + + + +
Sbjct: 121 VAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILE 180

Query: 194 WITQKK------ESLVPFVIAGDFNRKINY-----------LGNNDDFWKTIDPNDSLIR 236
             + +        + +P V+  D N   +              N+ DF +       +  
Sbjct: 181 KASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNGGVADNHKDFKELRYNECLMNF 240

Query: 237 FPKEKDSRC--------------------NANKNLRNKIPIDYFVMDQ---NAYKFLIQE 273
               K+                         N     K  IDY    +   N    L   
Sbjct: 241 SCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPL 300

Query: 274 SFSEILYNEDDIKSRGKRLSDHC 296
               ++ N           SDH 
Sbjct: 301 DPQWLVENNITGCPHPHIPSDHF 323


>gi|145603103|ref|XP_362029.2| hypothetical protein MGG_04474 [Magnaporthe oryzae 70-15]
 gi|145011420|gb|EDJ96076.1| hypothetical protein MGG_04474 [Magnaporthe oryzae 70-15]
          Length = 649

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/247 (11%), Positives = 66/247 (26%), Gaps = 31/247 (12%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ +V+ N   L           S  R+      + +        IV LQE+ S      
Sbjct: 5   EINIVTLNCWGLR--------FVSKWRSERILE-IGRRLSTTAPGIVALQEVWSEEDYEI 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSF 137
           +  +        T  ++ + K+       + + +  +        +         A    
Sbjct: 56  LRRE--------TRAVLPYGKQYHAGVFGSGLVILSRWPLEESSMFQFPLNGRPTAFFRG 107

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                +      +    +K  V+++           E   S +    + QA +    +  
Sbjct: 108 DWYAGKGVAHARIRYGPQKSQVIEVFNIHTHAAYETEAKDSYAA-HRASQAWFFAKLLRS 166

Query: 198 KKESLVPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDSRCNANK 249
             E     V  GD N     L +          D W+ +  +      P++ +       
Sbjct: 167 ASERGHLVVGLGDLNAPPFSLPHRLVTAQAPVRDAWRVLYHSHLDDEAPEDPNRHRRQPP 226

Query: 250 NLRNKIP 256
                + 
Sbjct: 227 TADFNLR 233


>gi|328765816|gb|EGF75929.1| hypothetical protein BATDEDRAFT_28958 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 579

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 181 CSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            +   + A  + +++T  K        V  GDFN             +  +         
Sbjct: 1   EAQRKEIAAIVSNFVTDIKTQNPEANIVSVGDFNDYQFTD-----ALEIHEGEHMTNMIN 55

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           K +D          N   +D+ ++  N  +     +  +IL+   D      R SDH P+
Sbjct: 56  KVEDGDRYTYLFQGNSQVLDHILVSNNLAE----ATEIDILHINADFTDMAGRASDHDPV 111

Query: 299 SIDYD 303
            +  D
Sbjct: 112 MVKLD 116


>gi|260777923|ref|ZP_05886816.1| phosphotransferase system [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605936|gb|EEX32221.1| phosphotransferase system [Vibrio coralliilyticus ATCC BAA-450]
          Length = 645

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 82/303 (27%), Gaps = 57/303 (18%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++  +S+NI                 R+      + +   +  AD++F+QE       
Sbjct: 378 PDELTTMSYNIWHAGSAPD-------PLRSQ---EYVYEQIIHSGADVIFMQEA------ 421

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSR 139
                   +    +    +    R S  + + AI  R      L   +  + G +     
Sbjct: 422 --------YGYQEALANRLGFEYRTSGANDNLAIFSRYPIKETLGSCNNHICGVRIDMGN 473

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                A  + +      + +L     S       +   +   S  +Q  + +   I +  
Sbjct: 474 GKLVDAYSIWLTSGDDIVNLLPDPAYSN------QELITKDDSARAQPLEGILTQIEKDS 527

Query: 200 ESLVPFVIAGDFNRK-----------INYLGNNDDFWKTIDPNDSLIRFPKEKDSR---- 244
           E  +P +I GDFN                   +    +  D ++ +  + +         
Sbjct: 528 EQGIPVIIGGDFNTLSYVDTTAETNIFGRGNIDLPTMRVADSHNYVDSYREVNPDVLHNK 587

Query: 245 --CNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                     N     ID+ +   +           E  Y   D        SDH  +  
Sbjct: 588 CITWTPFFKGNSGAGRIDFILYKGDNLSA-------EESYCLLDDGHSEMHPSDHGAVVT 640

Query: 301 DYD 303
            + 
Sbjct: 641 RFS 643


>gi|238755079|ref|ZP_04616426.1| hypothetical protein yruck0001_22720 [Yersinia ruckeri ATCC 29473]
 gi|238706639|gb|EEP99009.1| hypothetical protein yruck0001_22720 [Yersinia ruckeri ATCC 29473]
          Length = 266

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 89/297 (29%), Gaps = 71/297 (23%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +   +      ++ +R++ WNI                K+   D+  + +     DA ++
Sbjct: 35  LGLPLGVPLPTSENLRIMVWNIF---------------KQQRPDWLSVLRGFGR-DAQLI 78

Query: 70  FLQEMGSYNAVAKVFPKNTWCI----FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            LQE  +   + +    N         +S  +  +     +         +R++   +  
Sbjct: 79  LLQEAQTTPELVRFATSNFQAADQVPAFSLPQHPSGVMTLAAAHPVYCCPLREREPLLRL 138

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
               L+                     +G+ + V ++H  +F     + +          
Sbjct: 139 SKSALVTVYPIH---------------DGRLLMVANVHAVNFSLGVDVYSK--------- 174

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            Q + + + I+  +    P ++AGDFN             +       L       D   
Sbjct: 175 -QLEPIGEQISMHRG---PVILAGDFNAW---SRQRIRALQQFSKKVGLSEVEFLAD--- 224

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             N++     P+DY    +                   D +    R SDH P+ +++
Sbjct: 225 --NRSRAFGRPLDYVFYRE---------------LKVADAEVLVTRASDHNPLWVEF 264


>gi|197286103|ref|YP_002151975.1| hypothetical protein PMI2257 [Proteus mirabilis HI4320]
 gi|227356613|ref|ZP_03841000.1| endonuclease/exonuclease/phosphatase family protein [Proteus
           mirabilis ATCC 29906]
 gi|194683590|emb|CAR44472.1| endonuclease/exonuclease/phosphatase family protein [Proteus
           mirabilis HI4320]
 gi|227163369|gb|EEI48296.1| endonuclease/exonuclease/phosphatase family protein [Proteus
           mirabilis ATCC 29906]
          Length = 261

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 79/286 (27%), Gaps = 71/286 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +++  WNI           +K       S    L       D  ++ LQE  +   + 
Sbjct: 43  GTLKIAVWNI-----------YKQQRVNWRSMLETLAT-----DTQLLLLQEAQTTPELV 86

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   KN                  ++     A       V  L  S+P+           
Sbjct: 87  RFAGKN---------------HLIADQVPALAFQQHPAGVMTLSSSHPIYCCPLREKEPF 131

Query: 142 NRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R A   L+     I G+ + V+++H  +F F   +                 L    T 
Sbjct: 132 LRLAKSALITVYPLITGEHLMVINVHAINFSFGVDVYQR-------------QLNSLSTH 178

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
             +   P ++AGDFN          +  K       L     EKD R  A         +
Sbjct: 179 IIDHKGPVILAGDFNAW---SRPRVNVLKRFARRLKLKEVIFEKDLRTRAFGKP-----L 230

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           DY          L       ++ +           SDH P+   + 
Sbjct: 231 DYIFYRG-----LSLNKAEILITD----------ASDHNPLVATFS 261


>gi|289665292|ref|ZP_06486873.1| hypothetical protein XcampvN_20032 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289669211|ref|ZP_06490286.1| hypothetical protein XcampmN_12105 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 443

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/382 (10%), Positives = 91/382 (23%), Gaps = 103/382 (26%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            +   A ++R+ ++N +  S++ G  + K       +    +    + +  D+V L E  
Sbjct: 65  ASRPAAAQLRIATYNTSLYSDEAGGLIRKLQGDSAHAR--KIAAVLQRVRPDLVLLNEF- 121

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-------------------------- 109
            ++   +             +     +                                 
Sbjct: 122 DFDPEHRAADLFQHRYLQVAQPGGGEALHYPYRYLAQVNTGMPSGLDLDKNGSIGGEGRA 181

Query: 110 ------------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------A 145
                           + +  +     Q        K S      R             A
Sbjct: 182 RGNDAWGYGLHPGQYGMLLLSRYPIDEQAVRSFQLLKWSALPGAVRPIDPATKTSYYSDA 241

Query: 146 VELLVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-- 191
           +   + ++ K             +  L  H     F  + +   + +   L     +L  
Sbjct: 242 IWAQLRLSSKSHWDVPVRTPLGVVHALVSHPTPPVFDGAEKRNAARNHDELQLWRAYLDN 301

Query: 192 ----KDWITQKKES------LVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKE 240
               + W+   K S         FVI GD N    +  G +D     I+    L      
Sbjct: 302 APESQRWLCDDKGSCGGLAGDARFVILGDLNNDPVDGAGRHDAIRALIEHPRVLQYPTPR 361

Query: 241 KDSR---------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
            +                                 + +DY +  +     +    F    
Sbjct: 362 SEGGPEKTAEYATLGIAHSGDPHQVTGDFGPQAGTMRLDYVLPSRQFT-LIGSGIFWPAN 420

Query: 280 YNEDDIKSRGKRLSDHCPISID 301
           +  +   + G   SDH  + +D
Sbjct: 421 HAPEAAIADG---SDHHAVWVD 439


>gi|296269751|ref|YP_003652383.1| endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM
           43833]
 gi|296092538|gb|ADG88490.1| Endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM
           43833]
          Length = 362

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 69/280 (24%), Gaps = 44/280 (15%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                +++ +WN N                  + D      + ++ DAD+  LQE     
Sbjct: 87  PAGTTIKVFAWNTNY--------------WDMSDDKDAFYAFLRHQDADVYLLQE----- 127

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               ++      +       +          +   +    +   V           D + 
Sbjct: 128 ---YLYWDGDRPVRIDDSARLRAEFPGYRVLVQGELLTLTRLPVVAADHAVPETGADWYW 184

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ---WLKDWI 195
           + G  +A    + + G+ +   ++HL     +     +      L  + A     L    
Sbjct: 185 KGG--KAQRTDIRVGGRTVSFYNVHLPVPFRIGDDPLSGRFYRELAERWAWRNGELSKLR 242

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                +  P V+AGDFN     +            +              +     R   
Sbjct: 243 ADLAANRNPVVVAGDFNSAWMEVAP---LGGGTRLHTPAGSVLPVASWPVSEYPFPR-VW 298

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
            +D+                           + G   SDH
Sbjct: 299 RLDWLFTSPGLTV-------------SGYRFTGGAPYSDH 325


>gi|224002609|ref|XP_002290976.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220972752|gb|EED91083.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 562

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 83/306 (27%), Gaps = 66/306 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD------------------ 65
           + +VSWNI      +  +       R+     LL                          
Sbjct: 5   LTIVSWNIAN---AQPSAAADCPSLRSQELPRLLTDEILRSHFFNSPNQQASSQSQPYRH 61

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D++ LQE  S +    VF +  +    +      +     +               + Q
Sbjct: 62  PDVIALQESPSPSWATNVFTQFGFTSMGTQMSHSGYCDLLVSA-------------ELAQ 108

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           Q+ PLLG +D         AV   V +    I V         F +   +    S     
Sbjct: 109 QASPLLGMRDV-------PAVAATVVLPN-DIKVAVSSCHLSPFGEGAYDRQVES----- 155

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--------DFWKTIDPNDSLIRF 237
                 ++ +    +     ++ GDFN +       +        D WK    N  L  F
Sbjct: 156 ------EEIMQAMSKESSNCILMGDFNMRQAEDKTVENLCGGGWIDAWKAGGSNKQLK-F 208

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +                 D      +  + +          +E++    G  LSDH  
Sbjct: 209 TWDSIKNPYYKNGFGFTARFDRCYAKGDDLRVMDFNLVGNQSVSENE----GDCLSDHYG 264

Query: 298 ISIDYD 303
           I+   +
Sbjct: 265 IAAMIE 270


>gi|295839306|ref|ZP_06826239.1| membrane protein [Streptomyces sp. SPB74]
 gi|197696919|gb|EDY43852.1| membrane protein [Streptomyces sp. SPB74]
          Length = 349

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 85/316 (26%), Gaps = 85/316 (26%)

Query: 3   RKYVLALVFFLVPCTA-------------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           R+   AL+  ++P                     + +V+ N+N  +              
Sbjct: 97  RRSATALLALVLPVAVWLNLFGGLVLGHDQSRGDLTVVTHNVNAENG------------- 143

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
              D     +      A ++ L+E+                 ++ T+  +          
Sbjct: 144 ---DLPGTVRTLVGSGAQLLALEELTEQAVPRYASALKATYPYHVTKGTVG--------- 191

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FC 168
                         L   YPL G K      G  RA+    E     + V   HL S   
Sbjct: 192 --------------LWSKYPLRGTKPVDLELGWERALRTTAETPKGPVAVFVAHLPSVRV 237

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
            LD+         S      + L + I ++  +    ++ GD N  +N         + +
Sbjct: 238 KLDTGFVAGQRDRST-----EALGEAIREEPLTNK--LLVGDLNGTMND--------RAL 282

Query: 229 DPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            P  S +R  +    +              ID  ++           S   +        
Sbjct: 283 SPVTSQLRSTQGAAGKGFGFSWPAGFPMARIDQILVGGA-----EPVSSWTLP------- 330

Query: 287 SRGKRLSDHCPISIDY 302
              +  SDH P++   
Sbjct: 331 ---RTGSDHLPVAASI 343


>gi|332322174|emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 73/281 (25%), Gaps = 62/281 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++SWNI  L+                     LR+     +   VF+QE    N  A++  
Sbjct: 4   ILSWNIRGLNA--------------RMKRASLRKLIAINNPGCVFVQETKMENINARLMR 49

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
              W                        +A+  KN+     +                 A
Sbjct: 50  -TCWKSNEIEWIFSPSRGSSGGI-----LAIWDKNIFNANSNVIHQSW----------IA 93

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +  +   +  +  ++ ++        S                      I  +  + +P 
Sbjct: 94  ISGIFSTDQFECTLITVYNPCEIAARSEVWK----------------QIIEFQNSNPLPC 137

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDS------LIRFPKEKDSRCNANKNLRNKIPIDY 259
           ++ GDFN  +         +     ND       L        SR        +K  +D 
Sbjct: 138 LLVGDFNEVLRPSERGSLSFSHNGINDFKSFVQELKLLEIPSSSRAYTWYRANSKSLLDR 197

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            ++                      +    + LSDHCP+ +
Sbjct: 198 LLVSPE----------WVSHCPNIKVSILQRGLSDHCPLLV 228


>gi|291288504|ref|YP_003505320.1| Endonuclease/exonuclease/phosphatase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885664|gb|ADD69364.1| Endonuclease/exonuclease/phosphatase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 223

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 71/278 (25%), Gaps = 57/278 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +S+N++     +GV            D+     +      D   LQE+ +      +
Sbjct: 1   MKFISYNVHGWVGTDGV-----------RDFRRALGFINESAPDAAALQEVVTPVPADNL 49

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +   +S               +    A     +   ++   +     S S    R
Sbjct: 50  SEAHDFIQDHSGM------YATFGQTMLKKDAPYGNVLLTREKPLHVDFQDISVSGYEPR 103

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   V      + +L  HL               +      QA  ++  I+    +  
Sbjct: 104 GVIIAEVSSGYGSLTILTTHLGL-------------NRKERVIQAGMIRGIIS---GTPE 147

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P V+  D N       +                  +    R   +K           +  
Sbjct: 148 PTVLMCDCNEWYRSRASKIL----------DSCLSQAHRQRTFPSKYP--------ILA- 188

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                 +  +              + +  SDH P++ +
Sbjct: 189 ---LDMIRTKGLRIRTEVI--KSRQLRVASDHLPLAAE 221


>gi|289805075|ref|ZP_06535704.1| hypothetical protein Salmonellaentericaenterica_11707 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 131

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 40/159 (25%), Gaps = 33/159 (20%)

Query: 146 VELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           +   +      + I V+ +HL                 S    Q   L  W+        
Sbjct: 2   LYCRITPPMLNRPIHVMCVHLGLR-------------ESHRQAQLTMLAGWVNA-LPESE 47

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++AGDFN      G        ++       F +               + +D   + 
Sbjct: 48  PVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRAHGRPARTFPVSMPLLRLDRIYVK 101

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                     + LSDH P+S + 
Sbjct: 102 NANASSPGALP-----------LRNWRHLSDHAPLSAEI 129


>gi|218506516|ref|ZP_03504394.1| exodeoxyribonuclease III protein [Rhizobium etli Brasil 5]
          Length = 149

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 34/145 (23%), Gaps = 30/145 (20%)

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---LGNNDDFWKTIDPND----- 232
                +  + L  +  +  E  VP ++AGDFN                  +   +     
Sbjct: 4   FEYKLRWFRRLSAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKAY 63

Query: 233 ------SLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSE 277
                       +            +             ID+ ++      +L       
Sbjct: 64  AQLVAQGWTDAVRHLHPGERIYTFWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSACVR- 122

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
                       +  SDH P+ I+ 
Sbjct: 123 ------RKPRGWEHTSDHAPVMIEL 141


>gi|126736926|ref|ZP_01752661.1| possible endonuclease/exonuclease/phosphatase family protein
           [Roseobacter sp. SK209-2-6]
 gi|126721511|gb|EBA18214.1| possible endonuclease/exonuclease/phosphatase family protein
           [Roseobacter sp. SK209-2-6]
          Length = 404

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/386 (10%), Positives = 80/386 (20%), Gaps = 112/386 (29%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            +  + S+N+  L   +       S   +        +      +DADIV  QE+     
Sbjct: 2   NRFTIASFNVKNLIGPDQEYYRFQSYTPEEYAWKADWMADQLLTMDADIVGFQEIFDAEP 61

Query: 80  VA--------------------------------KVFPKNTWCIFYSTERLINHSKRDSN 107
           +                                 K+          +    +N +    +
Sbjct: 62  LRAVISEADTRGIAANAATIPDRSKRYHRKAIFRKLAYGPYGDAGLAFAPNVNDTGEPGH 121

Query: 108 NDIHTAIAVRKKN-----VRVLQQSYPLLGAKDSFSRAG---------NRRAVELLVEIN 153
                AI  R        V    +    +                   +R  ++  + + 
Sbjct: 122 RRPGLAILSRFGFIGEPEVIQEMEQPLDIPMSGLGGDEEEGFYTLRRLSRPILKARIPVG 181

Query: 154 GKKIWVLDIHLKSF--------------------CFLDSLENTYSPSCSLLSQQAQWLKD 193
            + + V + HLKS                                 S      +A  L+ 
Sbjct: 182 DQILTVFNCHLKSKLGEFITPAGAPYAPESVLTAYDPAGRALGSLRSALRRMAEAWVLRR 241

Query: 194 WITQKKESLVPFVIAGDFNR-----------------------------------KINYL 218
            I ++ E   P ++ GDFN                                    K +  
Sbjct: 242 AILEELEQDRPVMVLGDFNDGEHAVSSEIISGEMPFRNYAWMLRHDAKHGSDRYSKGDNE 301

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF--------- 269
              +   K    +       +                 ID   M ++             
Sbjct: 302 EIREAMDKVRLRSAEKTFLKRSLRDVVYTTAFGGVHESIDQIYMSRHFDPEWGGAIGNMQ 361

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDH 295
                   +           K  SDH
Sbjct: 362 YYSVFNDHLTDGSHPEAPYNKLASDH 387


>gi|293383838|ref|ZP_06629745.1| RgfB protein [Enterococcus faecalis R712]
 gi|293388687|ref|ZP_06633180.1| RgfB protein [Enterococcus faecalis S613]
 gi|312906947|ref|ZP_07765943.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 512]
 gi|312978798|ref|ZP_07790525.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 516]
 gi|291078914|gb|EFE16278.1| RgfB protein [Enterococcus faecalis R712]
 gi|291081844|gb|EFE18807.1| RgfB protein [Enterococcus faecalis S613]
 gi|310626932|gb|EFQ10215.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 512]
 gi|311288505|gb|EFQ67061.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis DAPTO 516]
          Length = 274

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFYST----- 95
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPIATQTPIHEDNFAYLIVQYLAEK 82

Query: 96  ---ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQNYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLATGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|259418309|ref|ZP_05742227.1| endonuclease/exonuclease/phosphatase [Silicibacter sp. TrichCH4B]
 gi|259345704|gb|EEW57548.1| endonuclease/exonuclease/phosphatase [Silicibacter sp. TrichCH4B]
          Length = 337

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 79/318 (24%), Gaps = 53/318 (16%)

Query: 1   MI-RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS------- 52
           MI R    +L+  L       A+ +R+ ++N     +  G+ L                 
Sbjct: 1   MIWRAAFTSLLVTLFLPLGVTAETIRVATFNAELSRKGPGLLLKDLRGDDEQVSAVIATI 60

Query: 53  -------------DYTLLRQYAKNLDADI----VFLQEMGSYNAVAKVFPKNTWCIFYST 95
                        D+       + L + I    V           A V           T
Sbjct: 61  AAADADILALQGLDWDHENTALRTLQSGIAMRGVEYPYFFMLKPNAGVASGLDLDGDGRT 120

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVR---------------VLQQSYPLLGAKDSFSRA 140
               +             IA+  K                  +     PL      +  A
Sbjct: 121 GEPEDAWGWGRFTGQG-GIALLSKFPVAADQAQDFTQMRWQDLPDHRMPLTKEGQPYPNA 179

Query: 141 GNRRAVEL---------LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                + L         ++  +G+ +W+L  H     F    +     +   +      L
Sbjct: 180 ATAAQLRLSSSNHWAVPVILPDGEPLWILSFHATPPVFDGPEDRNGRRNADEILLWVHVL 239

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              +  +     PFV+ GD N   +    + D    +  +  L           +     
Sbjct: 240 NGLLGDRMPE--PFVLMGDANNDPDRGEGHKDAIHRLLNDPHLQVVEPSGSQGAHTVNWE 297

Query: 252 RN-KIPIDYFVMDQNAYK 268
           R   + +DY +  +    
Sbjct: 298 RTGPMRVDYVLPSKGMNV 315


>gi|325510164|gb|ADZ21800.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 374

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 58/201 (28%), Gaps = 26/201 (12%)

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
                 V   ++   +    D  +  G   +     E     ++V    L +    D   
Sbjct: 41  FYDTDRVTWNKRYGTITDGSDQLTPKGFMYSQY-EFEPG---VYVDIYTLHADAGDDEGS 96

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------DD 223
                         + L  +I +        ++ GD N +     +N            D
Sbjct: 97  YEARRDN------IEQLAAYINEN-SKGNAVIVMGDTNTRYTRQQDNIKQALVDACNLKD 149

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
            W  +D N       +      N N    N   +D  +   +    L   S+     +  
Sbjct: 150 AWVKLDRNGVYPSTGEPLMDETNRNS--ANFEVVDKILFRGSKSLTLDALSYRLE--DTK 205

Query: 284 DIKSRGKRLSDHCPISIDYDF 304
            +   GK+LSDH PI   +++
Sbjct: 206 FVDKSGKQLSDHYPIIAQFNY 226


>gi|309357447|emb|CAP35778.2| hypothetical protein CBG_18301 [Caenorhabditis briggsae AF16]
          Length = 651

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 76/331 (22%), Gaps = 56/331 (16%)

Query: 22  QKVRLVSWNI------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +R++ +NI              L        ++    RT      +R +       + 
Sbjct: 325 DVIRIMGYNILADLYLNLNLEQEELFFNYCPKAYQRIFHRTPIFLKQIRDFIDA-QVSLF 383

Query: 70  FLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           FLQE+    +   +        +    S +            D      +   +  + + 
Sbjct: 384 FLQEVDMRRNEMYIEPFLKTLNYSSEISKKGGQISEGVALIYDNKLFRMLYSNSFNLAEL 443

Query: 127 SYPLLGAKDSFSR------AGNRR--------AVELLVEINGKKIWVLDIHLKSFCFLDS 172
                   D +        + NR          V L    +G+ +   + HL      + 
Sbjct: 444 VISEQCNSDIYRMLKSSEESENRFNTRQTIVQIVVLEESKSGRLLVCANTHLHHNPLDEH 503

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
           ++   +  C     +          +    +  +  GDFN   +             P +
Sbjct: 504 VKVLQALVCIRKLMEV---YKKRKSESGREIRVLFGGDFNSTPDGA-VFQMMANGFLPKE 559

Query: 233 SLIRFPKE----------------KDSRCNANKNL-----RNKIPIDYFVMDQNAYKFLI 271
             +    E                  +    N             +DY            
Sbjct: 560 HEVWKCDEKVVAENIQIEQKLKCLTGTPEYTNYTSASKKEGFVGCLDYIWGLDVETVRNC 619

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                E +             SDH P+  D 
Sbjct: 620 PMPEHEKVIR-YKALPSAISPSDHLPVICDI 649


>gi|221040040|dbj|BAH11783.1| unnamed protein product [Homo sapiens]
          Length = 418

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 63/202 (31%), Gaps = 10/202 (4%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 40  DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 99

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +       D   
Sbjct: 100 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISL 154

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++              +   L           + L+     +     QK
Sbjct: 155 LDRDNVGLVLLLQ-PKIPYAACLAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQK 213

Query: 199 KESLVPFVIAGDFNRKINYLGN 220
             S  P V+ GDFN        
Sbjct: 214 DGSFCPIVMCGDFNSVPGSPLY 235


>gi|106322|pir||B34087 hypothetical protein (L1H 3' region) - human
          Length = 1280

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 76/292 (26%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ N+N L+                     L  + K+ D  +  +QE         +
Sbjct: 13  ITILTLNVNGLNAP--------------IKRHRLANWIKSQDPSVCCIQE-------THL 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++T  +     R      + +       +A+                           
Sbjct: 52  MCRDTHRLKIKGWRK---IYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 102 YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 144

Query: 204 PFVIAGDFNRKINYLGN-------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  ++ L               N    +    +      PK  +    +  +
Sbjct: 145 -TIIMGDFNTPLSTLDRSTRQKVNKDIQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 203

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ +  +       +                   LSDH  I ++ 
Sbjct: 204 HTY-SKIDHILGSKALLSKCKRTEIITNC------------LSDHSAIKLEL 242


>gi|315173423|gb|EFU17440.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1346]
          Length = 274

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFY------- 93
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPVATQTPIHEDNFAYLIVQYLAEK 82

Query: 94  -STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQHYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLAMGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|256783680|ref|ZP_05522111.1| hypothetical protein SlivT_04230 [Streptomyces lividans TK24]
 gi|289767563|ref|ZP_06526941.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289697762|gb|EFD65191.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 301

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 64/293 (21%), Gaps = 66/293 (22%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L+P     A  + +V  N+                    +D     +       D+V L
Sbjct: 74  LLLPAPEPGADDLVVVQHNV----------------SDENTDPEGTARALVRAGPDLVAL 117

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +E+                      + +              +  +      L  S PL 
Sbjct: 118 EEL-------------VPPALEVYAKTLAPDYPYRTVRGTVGLWSKYP----LSGSRPLD 160

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                      R  +  +      ++ V   HL S         +     S     A  L
Sbjct: 161 IKPRGIEEEWERG-LRTVAHTPRGEVAVYVAHLPSVRVGAGGLASSRRDES-----AGLL 214

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            D +    E L   V+ GD N  ++                 L            +    
Sbjct: 215 GDALD--AEELRRVVLLGDLNGTVDDRALRPLTDSLNVAGRGL----------AFSFPAG 262

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                ID  +        L     +                SDH P+     +
Sbjct: 263 LPLARIDQVMARAGTVGALRTLPAT---------------GSDHLPVVAQVSW 300


>gi|229546804|ref|ZP_04435529.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1322]
 gi|255974026|ref|ZP_05424612.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T2]
 gi|256854199|ref|ZP_05559563.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T8]
 gi|257081201|ref|ZP_05575562.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis E1Sol]
 gi|257086297|ref|ZP_05580658.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis D6]
 gi|257415520|ref|ZP_05592514.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis
           AR01/DG]
 gi|307278991|ref|ZP_07560050.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0860]
 gi|307290975|ref|ZP_07570865.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0411]
 gi|312901498|ref|ZP_07760772.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0470]
 gi|229308153|gb|EEN74140.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1322]
 gi|255966898|gb|EET97520.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T2]
 gi|256709759|gb|EEU24803.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T8]
 gi|256989231|gb|EEU76533.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis E1Sol]
 gi|256994327|gb|EEU81629.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis D6]
 gi|257157348|gb|EEU87308.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis
           ARO1/DG]
 gi|306498045|gb|EFM67572.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0411]
 gi|306504378|gb|EFM73589.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0860]
 gi|311291398|gb|EFQ69954.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0470]
 gi|315027147|gb|EFT39079.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2137]
 gi|315029829|gb|EFT41761.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX4000]
 gi|315172061|gb|EFU16078.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1342]
 gi|327534538|gb|AEA93372.1| endonuclease/exonuclease/phosphatase family protein RgfB
           [Enterococcus faecalis OG1RF]
          Length = 274

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFY------- 93
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPIATQTPIHEDNFAYLIVQYLAEK 82

Query: 94  -STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQHYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLAMGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|171688608|ref|XP_001909244.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944266|emb|CAP70376.1| unnamed protein product [Podospora anserina S mat+]
          Length = 565

 Score = 57.3 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 80/319 (25%), Gaps = 67/319 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMGSYNAVA 81
           + + S+N+          L +    +    Y LL         DAD + LQE+     ++
Sbjct: 26  LTVASYNV----------LAEFEYPQKEDRYPLLVNNILDDKADADALVLQEVTD-GFLS 74

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +         Y         +       +    V    V    +S           +  
Sbjct: 75  FLLSDERVSDRYPYCSHGPPDQPGMGPLPNFLNMVVLSKVAFDWESVSF--------QRK 126

Query: 142 NRRAVELLVEING-------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           ++ A+       G       K + +  +HL               + +      + L  +
Sbjct: 127 HKGALVARFRHVGKWQGDEFKPVVLAVVHLSHGLTDG--------AVASRKGDIKRLIGY 178

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDF------------WKTID---PNDSLIRFPK 239
           + +      P+V+AGD+N   +     +              WK +D    +  L+   +
Sbjct: 179 LEENYG-GCPWVLAGDWNIATSKEAIQEALEKKNVSDLTVEQWKGLDTIFKDAGLVDAWE 237

Query: 240 EKDSRCNANKNLR---------------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                 +                          D  ++    +  + + +          
Sbjct: 238 VTAEDKDGGATWDPPVNGVAVTLSGGNIWPQRYDRILVRGEDFLDVKEFNMFGQEKGHVG 297

Query: 285 IKSRGKRLSDHCPISIDYD 303
                   SDH  I     
Sbjct: 298 DAVEESFASDHWGIRAVLS 316


>gi|260803235|ref|XP_002596496.1| hypothetical protein BRAFLDRAFT_262999 [Branchiostoma floridae]
 gi|229281753|gb|EEN52508.1| hypothetical protein BRAFLDRAFT_262999 [Branchiostoma floridae]
          Length = 287

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/272 (9%), Positives = 67/272 (24%), Gaps = 33/272 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           +++ ++N+                         L Q  +    DI+ +QE+      A  
Sbjct: 37  LKIAAFNVQVFGL---------RKMSNPEVVKTLVQIIRRY--DIIAIQEIRDSSETAFP 85

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNN--DIHTAIAVRKKNVRVLQQSYPLLGAK----- 134
            +  K    +          S+R              +   V V    +   G +     
Sbjct: 86  TLLAKVNKDLPPDQTYRSIISERLGRTSSKEQYGFMYKPSKVTVTDAYHYDDGEEAVGKV 145

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            +   A  R    +        +    + +               +   +        D 
Sbjct: 146 KNPKDAFQREPFIVRFSAPKTAVDDFAVVVIHTSP--------RDAVKEIDHLTDVYDDV 197

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +        +I GDFN   +Y+  ++     +  +        +      A  +    
Sbjct: 198 VHKWGLED--VIITGDFNAGCSYVTKSEWAGIRLRHDPRFTWLIGDDVDTTVAKSDCPYD 255

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
               + +      K  +  S    L+++    
Sbjct: 256 R---FVLAGALMKKSNVAGSAKAFLFDKAYGL 284


>gi|260808468|ref|XP_002599029.1| hypothetical protein BRAFLDRAFT_62034 [Branchiostoma floridae]
 gi|229284305|gb|EEN55041.1| hypothetical protein BRAFLDRAFT_62034 [Branchiostoma floridae]
          Length = 924

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/340 (12%), Positives = 96/340 (28%), Gaps = 64/340 (18%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR--------------QYAK 62
           +V + +R+   +WN+N       ++    S+     D   L+                + 
Sbjct: 522 TVPEPLRVCVGTWNVNGGKHFRSIAYKHQSMTDWLLDNPKLKPECSLADSSGRLDWSVSD 581

Query: 63  NLDADI--VFLQEMGSYNAVAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIHTAI- 114
               DI  +  +EM   NA   V       +  W +        +H      +D    + 
Sbjct: 582 EHPVDIYAIGFEEMVELNAGNIVMTASTDNQRAWALELQKTISRDHKYILVASDQLVGVC 641

Query: 115 ---AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
               +R +    ++     +        AGN+ AV + + + G  +  +  H  +     
Sbjct: 642 LYVFIRPQLAPFVRDVAVDIVKTGLGGAAGNKGAVAIRMLLYGTSMCFVCSHFAAG---- 697

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
             ++      +   + A+ L   + +   S       GDFN +I+            +  
Sbjct: 698 --QSQVKERNADFGEIARGLSFPMGRTLGSHDYIFWCGDFNYRIDLTNEECKALIAEENW 755

Query: 232 DSLIRFPK-------------EKDSRCNANKNLRN---------------KIPIDYFVMD 263
             L  F +              ++ + N     +                    D  +  
Sbjct: 756 GKLQTFDQLNITKQQGEAFKGFQEGQTNFAPTYKYDLFSDDYDTSEKCRCPAWTDRVLWR 815

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISI 300
           +        E       +   +   G+   + SDH P+  
Sbjct: 816 RRRMPRTKTEGEEPPPVDHGTLLHYGRAEIKTSDHRPVVA 855


>gi|156381859|ref|XP_001632273.1| predicted protein [Nematostella vectensis]
 gi|156219326|gb|EDO40210.1| predicted protein [Nematostella vectensis]
          Length = 215

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 22/221 (9%)

Query: 27  VSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+N+                +            L +   + +ADI+ LQE+ S +    
Sbjct: 1   MSYNVLADGLMQAHPGLYEECEERCLDWEYRKKNLLKEILHCNADILCLQEVESEHFDNW 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            FP+     +        + KR        A   +K     L         KD      +
Sbjct: 61  FFPELCKAGY-----KGFYKKRTGKKSDGCATFYKKSRFHHLLTQEVEFCRKDILVMDRD 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-- 200
             A+ +++    +     +           L N       LL  Q   L   I Q     
Sbjct: 116 NVALIVVLRPRYENGKTCNHTALCVANTHLLFNKKRGDIKLL--QLSSLFAEIQQVTSKV 173

Query: 201 ---------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                         ++ GDFN        +      +D   
Sbjct: 174 CSSEGSRGIKQCGVILCGDFNMTPWCPLYSLVVQGFLDYEG 214


>gi|328883590|emb|CCA56829.1| integral membrane protein [Streptomyces venezuelae ATCC 10712]
          Length = 345

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/252 (11%), Positives = 58/252 (23%), Gaps = 52/252 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             L    +     I F+ E            +       S     +        +  T  
Sbjct: 138 RALIDVIRRERPQIAFVSECD----------RACRTALTSAFADSHPYYASVEGEGSTGS 187

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            V         +  P                     +I G  + +   H           
Sbjct: 188 IVLSGYPLRDWRMIPAAMGMPG-----------ATADIAGVPVRLQLAHPLPPLPGQVHL 236

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                       +   ++D+      +  P +IAGDFN   ++      F   +      
Sbjct: 237 WKR---------ELGRVQDYAATAARTPGPTLIAGDFNASQDHA----AFRHILAAGGLQ 283

Query: 235 IRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               + + SR             + ID+ ++                 +   +++     
Sbjct: 284 DAARRAEASRTPTWPTEGPLPPYVQIDHVLVRD---------------FTVREVRFPALA 328

Query: 292 LSDHCPISIDYD 303
            SDH  +  D D
Sbjct: 329 GSDHRAVLADLD 340


>gi|148975907|ref|ZP_01812696.1| hypothetical protein VSWAT3_06336 [Vibrionales bacterium SWAT-3]
 gi|145964652|gb|EDK29905.1| hypothetical protein VSWAT3_06336 [Vibrionales bacterium SWAT-3]
          Length = 122

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 38/118 (32%), Gaps = 12/118 (10%)

Query: 195 ITQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-- 251
           I+    +    + +GDFN   + +  +  + +  +   +    +     S  +   N   
Sbjct: 6   ISLNIPASETVIYSGDFNVNKLKFPSDYQEMFANLQAIEPE--YSGYTASTFDPRINNFA 63

Query: 252 -------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   N   +DY V+           +  ++  +      +   LSDH P+S   
Sbjct: 64  GEPMSGGENVEYLDYVVVSSEYAVKTQNNNRVDVPRSTSSELWKHYNLSDHFPVSAVI 121


>gi|86143416|ref|ZP_01061818.1| hypothetical protein MED217_09540 [Leeuwenhoekiella blandensis
           MED217]
 gi|85830321|gb|EAQ48781.1| hypothetical protein MED217_09540 [Leeuwenhoekiella blandensis
           MED217]
          Length = 193

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 60/213 (28%), Gaps = 31/213 (14%)

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
            +       N I+     + + V      Y ++        +    A+ + +      + 
Sbjct: 3   PDLDYPFFYNGINVNNKSKSQAVY---SKYKIVNQGSLNFESSFNNAIFIDILKGKDTLR 59

Query: 159 VLDIHLKSFCFLDSLENTYSPS--------CSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
           V ++H++S      L      +             +Q   +  ++  + E     ++AGD
Sbjct: 60  VYNMHMQSLALTPQLGALEQENTKSLVGRLGRAFKKQEDQVYKFLAHQAECPYKKIVAGD 119

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN  +     N          D    F ++              + ID+ + D       
Sbjct: 120 FNNTVFSYTYNKI------RGDKKDAFEEQGSGFGRTFIFDVIPLRIDFILTDPE----- 168

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    +     ++     SDH PI    +
Sbjct: 169 ---------FKTQAFQNFDVEYSDHFPIMAVLE 192


>gi|302383754|ref|YP_003819577.1| endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194382|gb|ADL01954.1| Endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 319

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 70/312 (22%), Gaps = 85/312 (27%)

Query: 7   LALVFFLVP----------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           L L+   V             A  A +  L S N+   +   G                 
Sbjct: 70  LTLLVLAVAGWPQWFPPTGTAAVGAPEFSLYSANVWVGNTDVGG---------------- 113

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           + +  +   ADIV L E+G   A         +    +  R                 A 
Sbjct: 114 MARSIEAAGADIVVLVEVGDTPAGQMDRIVGAYPYRVTGNRNPGKKGPS-----RYVFAS 168

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           R     V   +  L                 L+ E     + ++ +HL            
Sbjct: 169 RWPLRTVQVHAEELDAHG-------------LVAETPLGPVTLVGVHLTRPWPYQYQWGQ 215

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                     QA+ L +W         P + AGDFN  ++                    
Sbjct: 216 --------IIQARGLANWRKAYSG---PMIFAGDFN-SVSSARIGRQIQAE--------- 254

Query: 237 FPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                 +                + ID      +                  D +     
Sbjct: 255 -TGLIPAPGWPGTWHSAMPSPAAMTIDQVYRSPDLALL--------------DRRLGRGN 299

Query: 292 LSDHCPISIDYD 303
            SDH P+   + 
Sbjct: 300 GSDHRPVITRFT 311


>gi|268574660|ref|XP_002642309.1| Hypothetical protein CBG18301 [Caenorhabditis briggsae]
          Length = 636

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 76/331 (22%), Gaps = 56/331 (16%)

Query: 22  QKVRLVSWNI------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
             +R++ +NI              L        ++    RT      +R +       + 
Sbjct: 310 DVIRIMGYNILADLYLNLNLEQEELFFNYCPKAYQRIFHRTPIFLKQIRDFIDA-QVSLF 368

Query: 70  FLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           FLQE+    +   +        +    S +            D      +   +  + + 
Sbjct: 369 FLQEVDMRRNEMYIEPFLKTLNYSSEISKKGGQISEGVALIYDNKLFRMLYSNSFNLAEL 428

Query: 127 SYPLLGAKDSFSR------AGNRR--------AVELLVEINGKKIWVLDIHLKSFCFLDS 172
                   D +        + NR          V L    +G+ +   + HL      + 
Sbjct: 429 VISEQCNSDIYRMLKSSEESENRFNTRQTIVQIVVLEESKSGRLLVCANTHLHHNPLDEH 488

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
           ++   +  C     +          +    +  +  GDFN   +             P +
Sbjct: 489 VKVLQALVCIRKLMEV---YKKRKSESGREIRVLFGGDFNSTPDGA-VFQMMANGFLPKE 544

Query: 233 SLIRFPKE----------------KDSRCNANKNL-----RNKIPIDYFVMDQNAYKFLI 271
             +    E                  +    N             +DY            
Sbjct: 545 HEVWKCDEKVVAENIQIEQKLKCLTGTPEYTNYTSASKKEGFVGCLDYIWGLDVETVRNC 604

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                E +             SDH P+  D 
Sbjct: 605 PMPEHEKVIR-YKALPSAISPSDHLPVICDI 634


>gi|256761712|ref|ZP_05502292.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T3]
 gi|256682963|gb|EEU22658.1| endonuclease/exonuclease/phosphatase [Enterococcus faecalis T3]
          Length = 274

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFYST----- 95
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPIATQTPIHEDNFAYLIVQYLAEK 82

Query: 96  ---ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQNYYWSWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLAMGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|117623644|ref|YP_852557.1| cytolethal distending toxin type IV subunit B [Escherichia coli
           APEC O1]
 gi|50983078|gb|AAT92048.1| cytolethal distending toxin type IV subunit B [Escherichia coli]
 gi|115512768|gb|ABJ00843.1| cytolethal distending toxin type IV subunit B [Escherichia coli
           APEC O1]
 gi|239793090|dbj|BAH72974.1| cytolethal distending toxin B [Escherichia coli]
 gi|239793094|dbj|BAH72977.1| cytolethal distending toxin B [Escherichia coli]
 gi|239793106|dbj|BAH72986.1| cytolethal distending toxin B [Escherichia coli]
          Length = 273

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 100/302 (33%), Gaps = 44/302 (14%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +  L+       A ++   ++ +WN+   +         +           +RQ  
Sbjct: 1   MKKLLFLLMILPGISFADLSD-FKVATWNLQGSNAPTENKWNTH-----------VRQLV 48

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               A DI+ +QE GS  + A +          +           +    +T    R + 
Sbjct: 49  TGSGAVDILMVQEAGSIPSSATL----------TEREFRTPGIPMNEYIWNTGTNSRPQQ 98

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN----GKKIWVLDIHLKSFCFLDSLENT 176
           + +       L  + + +   NRRA E++V        + I  + I    F    +L N 
Sbjct: 99  LFIYFSRTDALSNRVNLAIVSNRRADEVIVLSPPTVASRPIIGIRIGNDVFFSTHALANR 158

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
              S ++++   ++              ++IAGDFNR           + T++P      
Sbjct: 159 GIDSGAIVNSVFEFFNRQTD-PIRQAANWMIAGDFNRSPAM------LFSTLEPGIRNHV 211

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                     A+        +DY V+  +     +      +  +      RG+  SDH 
Sbjct: 212 NIIAPPDPTQAS-----GGVLDYAVVGNS-----VSFVLPLLRASLLFGLLRGQIASDHF 261

Query: 297 PI 298
           P+
Sbjct: 262 PV 263


>gi|326329590|ref|ZP_08195912.1| M23 peptidase domain protein [Nocardioidaceae bacterium Broad-1]
 gi|325952586|gb|EGD44604.1| M23 peptidase domain protein [Nocardioidaceae bacterium Broad-1]
          Length = 647

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 71/291 (24%), Gaps = 40/291 (13%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A    +VRL   NI            K S+ R       L +  K    D V L E 
Sbjct: 391 SPAAVSGPQVRLAQANI------------KVSLSRAKYRSD-LAEVMK-HGPDFVSLNEA 436

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S                 S E                 +  R      + +    L   
Sbjct: 437 QSRTVSDISVRGYGTYRASSDEYGTRSQALSPV------VMWRTDRWVAVDKGTVQLTKP 490

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            +  +  NR A  +++  +     +  I   +                    +   L   
Sbjct: 491 VTGVKNDNRYATWVVLASSDGSGRISVISTHTMTSPAKSPQARKDEAQRGFAKLAGLAQG 550

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFW--KTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + +      P ++AGD N      G + D W  K +     +    +   +         
Sbjct: 551 LQKY----GPVLVAGDLNSPYPRNGGDGDPWGPKPLMTKAGMTSSFETLGAPPQGWATHD 606

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ID+ +                         +  K  SDH  +  D++
Sbjct: 607 GGGTIDWLLGSNATA--------------TPTRHATFKLASDHHGLVGDFN 643


>gi|84623150|ref|YP_450522.1| hypothetical protein XOO_1493 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84367090|dbj|BAE68248.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 443

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/379 (10%), Positives = 89/379 (23%), Gaps = 103/379 (27%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             A  +R+ ++N +  S++ G  + +       +    +    + +  D+V L E   ++
Sbjct: 68  PAAATLRIATYNTSLYSDEAGGLIRELQGDSAHAR--KIAAVLQRVRPDLVLLNEF-DFD 124

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNND----------------------------- 109
              +             +     + R                                  
Sbjct: 125 PEHRAADLFQQRYLLVAQPGGGEALRYPYRYLAPVNTGVPSGLDLDNNGSIGGEGRARGN 184

Query: 110 ---------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------AVEL 148
                        + V  +    +Q        K S      R             A+  
Sbjct: 185 DAWGYGLHPGQYGMLVLSRYPIDVQAVRSFQLLKWSALPGALRPIDPASKTSYYSNAIWA 244

Query: 149 LVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----- 191
            + ++ K             +  L  H     F  + +   + +   L     +L     
Sbjct: 245 QLRLSSKSHWDVPVRTPLGVVHALVSHPTPPVFDGAEKRNAARNHDELQLWRAYLDNAPE 304

Query: 192 -KDWITQKKES------LVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            + W+   K++         FVI GD N    +  G +      I+    L       + 
Sbjct: 305 SQRWLCDDKDNCGGLDSDARFVILGDLNNDPVDGAGRHAAIRALINHPRVLQYPTPRSEG 364

Query: 244 R---------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                                           + +DY +        +    F       
Sbjct: 365 GPEKTAEYAALGIAHSGDPHQVTGDFGPQAGTMRLDYVLPSHQFT-LIGSGIFWPASSAP 423

Query: 283 DDIKSRGKRLSDHCPISID 301
           +   + G   SDH  + +D
Sbjct: 424 EAAIADG---SDHHAVWVD 439


>gi|327259312|ref|XP_003214482.1| PREDICTED: protein angel homolog 1-like [Anolis carolinensis]
          Length = 660

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVSL----WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + R++S+NI      E            +   +   T + Q  ++ D DI+ LQE+   +
Sbjct: 250 EFRVMSYNILAQDLIEQSPHLYMHCHPDILNWSYRLTNILQEIQHWDPDILCLQEIQENH 309

Query: 79  AVAKVFPKNTWCIF--YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              ++ P  T   F      R    +   +         +   N     +    +  +D+
Sbjct: 310 FWEQLEPALTMMGFTCIYKRRTGRKTDGCAICYKQNMFQLISSNPVEFFRPGLDILNRDN 369

Query: 137 FSRAGNRRAVELLVEINGK--KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  + +      +     + V + H+        ++                +   
Sbjct: 370 VGLVLLLQPLLPEGLGDKAVSPLCVANTHVLYNPRRGDIKLAQMALL------LAEIDKT 423

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +     
Sbjct: 424 AKMADGSYCPIILCGDLNSVPDSPLYK 450


>gi|284036026|ref|YP_003385956.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
 gi|283815319|gb|ADB37157.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
          Length = 358

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/250 (9%), Positives = 55/250 (22%), Gaps = 45/250 (18%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             +   AK  D D+V + E               W    +        +     +    +
Sbjct: 124 PKVWAMAKKYDPDVVLVLEANQR-----------WQDELAPMEASYPYRILHPLENTYGM 172

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  +      +   L+              V +  E+   ++                 
Sbjct: 173 LLYSRLPMRHHEVRFLIQDDIPS--------VYIQFELPSGQVIHFYGVHPMPPTPTEHY 224

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
            +              L     + ++   P ++AGD N            ++ +      
Sbjct: 225 RSAERD--------AELLLVGKEARKLKEPVIVAGDLNDVAWSHTTR--LFQRVS--GLF 272

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                              + P+D+  +  +     I              +      SD
Sbjct: 273 DPRVGRGLYNTFHANYFLFRWPLDHVFVSHHFKLRKI--------------RRLPNCGSD 318

Query: 295 HCPISIDYDF 304
           H PI     +
Sbjct: 319 HFPIFTALTY 328


>gi|242218017|ref|XP_002474803.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726051|gb|EED80014.1| predicted protein [Postia placenta Mad-698-R]
          Length = 266

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 76/292 (26%), Gaps = 35/292 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADIVFLQEMG 75
              +RLV+WN+N             S  R     T L    +           + LQE+ 
Sbjct: 1   PSSLRLVTWNVN---------SATYSQLRLRCILTYLETLLRPHGFGPLEPCCILLQEV- 50

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           S NA+  +   +      +   +I                              L  A  
Sbjct: 51  SLNALDFLLSID---WVLNDFLIIPAGSVQWPRGAQYGNVTLISKNIPFVAGQWLDFAAS 107

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S  R      V +    +G+ + +   +                +  + + Q  ++ + +
Sbjct: 108 SMGRNALITDVAVRHSQSGRTLTLRIANTHLESLP--------ENALIRAAQLSYIAEKL 159

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--KNLRN 253
            +        V+AGD N        ND               P+ + S       +    
Sbjct: 160 RRPTVHGG--VVAGDMNAIC----PNDQVIHRQAGLVDAHPGPENERSFTWGYQPRTAFP 213

Query: 254 KIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +D          +  +Q    E       +++     SDH  +     F
Sbjct: 214 PGRLDRMYFTPQRMSWDSVQLKVDEPSRIGMGLQAGNLWASDHYGLMSTVRF 265


>gi|318059139|ref|ZP_07977862.1| hypothetical protein SSA3_14411 [Streptomyces sp. SA3_actG]
 gi|318075638|ref|ZP_07982970.1| hypothetical protein SSA3_02687 [Streptomyces sp. SA3_actF]
          Length = 349

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 85/316 (26%), Gaps = 85/316 (26%)

Query: 3   RKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           R+   AL+  ++P                     + +V+ N+N  +              
Sbjct: 97  RRSATALLALVLPVAVWLNLFGGLVLGHGQSRGDLTVVTHNVNAENG------------- 143

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
              D     +      A ++ L+E+                 ++ T+  +          
Sbjct: 144 ---DLPGTVRTLVGSGAQLLALEELTEQAVPEYASALKATYPYHVTKGTVG--------- 191

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FC 168
                         L   YPL G K      G  RA+    E     + V   HL S   
Sbjct: 192 --------------LWSKYPLRGTKPVDLELGWERALRTTAETPRGPVAVFVAHLPSVRV 237

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
            LD+         S     A+ L   I ++  +    V+ GD N  +N         + +
Sbjct: 238 KLDTGFVAGQRDRS-----AEALGKAIREEPLTNK--VLVGDLNGTMND--------RAL 282

Query: 229 DPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            P  S +R  +    +              ID  ++           S   +        
Sbjct: 283 SPVTSQLRSTQGAAGKGFGFSWPAGFPMARIDQILVGGA-----EPVSSWTLP------- 330

Query: 287 SRGKRLSDHCPISIDY 302
              +  SDH P++   
Sbjct: 331 ---RTGSDHLPVAASI 343


>gi|315179365|gb|ADT86279.1| hypothetical protein vfu_A01089 [Vibrio furnissii NCTC 11218]
          Length = 287

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 84/282 (29%), Gaps = 62/282 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++LV WNI           +K +     ++         + DA +V LQE     A+ 
Sbjct: 60  GTLKLVVWNI-----------YKQNRDTWQAELNRF-----SHDAQLVLLQEASMTPALQ 103

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   ++ W                        +    +++  L          + + R  
Sbjct: 104 RWISEHHW--------GGTRVNAFQVLGESAGVLNLSRHMPQLA---CGYTEMEPWLRLP 152

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 L    NG+ + V+++H  +F +                   + L   I + ++ 
Sbjct: 153 KSGIYALYPLSNGQVLAVVNLHAVNFSYGTQEYR-------------EQLTALIQELRQH 199

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++AGDFN   ++        +       +       D+R        N +P+D+  
Sbjct: 200 KGPILVAGDFN---SWSEKRTQVLRDALSALGMQEATFSPDNRAR----FINGLPLDHVF 252

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             Q   K                        SDH P+ +++ 
Sbjct: 253 YKQLTLKKAKA---------------PESDASDHNPLLLEFS 279


>gi|40806723|gb|AAR92171.1| hypothetical protein [Mycobacterium phlei]
          Length = 317

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 79/290 (27%), Gaps = 66/290 (22%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A+ +  +R+VS N+                    +D   +     +  AD++ LQEM  
Sbjct: 87  PAAPSVPLRVVSANL----------------GMGRADPQAVVA-LADATADVLVLQEMT- 128

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                   P+    +  +        +      +   I V  ++  V   + P       
Sbjct: 129 --------PEAAAGLSAAGLDRGFPHRAIDPKPMAAGIGVWSRHPIVAATAVPGYQMPML 180

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            +R        + V     +  VL +HL +         T              L + + 
Sbjct: 181 STR--------IRVPEVRTETTVLAVHLAAPWVQPLRWFTDD---------IARLPETLR 223

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
              +     ++AGD N   +        ++ +          +       +  + R + P
Sbjct: 224 AAADGPGAVIVAGDLNATYDMRP-----FRRLLDAGYRDAAEQAGAGLTRSYPSRRWRPP 278

Query: 257 ---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ID+ ++                        +     SDH  ++   +
Sbjct: 279 VVGIDHVLV---------------HNAVATSAYTVDVPGSDHRGLATVIE 313


>gi|86156653|ref|YP_463438.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85773164|gb|ABC80001.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 389

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 68/301 (22%), Gaps = 39/301 (12%)

Query: 32  NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI 91
                                    +          +V LQE   +       P +    
Sbjct: 86  EAFVAATTAVWATVRANDFHLRAEAIADELAATRPGLVGLQEAYLWRVQD---PGDFLAG 142

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDSFSRAGNRRAVEL-- 148
             +    + +       D   A  +R      V    +    A     R  +R  +    
Sbjct: 143 GTTPATTVAYDYVQDLLDALAARDLRYVVAAEVTLFDFEAPVATGQDVRMTDRGVILARS 202

Query: 149 ---LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK------- 198
                   G     L         +       S       +  +++   +          
Sbjct: 203 DLTTALPGGGVYATLLPVNVLGNAVQVKRGWVSVDAKYRGEWLRFVSTHLEAYHAGVRTA 262

Query: 199 ---------KESLVPFVIAGDFNRKINYLGN-------NDDFWKTIDPN--DSLIRFPKE 240
                         P V+ GD N +    G          D W  ++ +       FP++
Sbjct: 263 QAAELAAALAAETRPVVLVGDLNSEPGTEGEAVLAGAGFRDVWAAVNGDAAGLTCCFPED 322

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +             IDY ++   A  +       E++      +  G   SDH  ++ 
Sbjct: 323 LRTGPGDPGFADLSTRIDYVLVRGPAQPWSA-----EVVGETAAERVGGLWPSDHAGVAA 377

Query: 301 D 301
           +
Sbjct: 378 E 378


>gi|325067220|ref|ZP_08125893.1| exodeoxyribonuclease III [Actinomyces oris K20]
          Length = 163

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 49/170 (28%), Gaps = 35/170 (20%)

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNR 213
            + +  +++ +   L     TY           + L+D +      E  +P  + GD+N 
Sbjct: 7   PVRLWSLYVPNGRELTHPHYTYKLD------WLRVLRDDVAAWLEAEPDLPLALVGDWNV 60

Query: 214 KIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--- 254
                                     F    +     +   +  +      + LR     
Sbjct: 61  APRDEDVWDMSVFEGATHVSAPERQAFAAFAEAGMREVTRERVTNYTYWDYQKLRFPRNE 120

Query: 255 -IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            + ID+          +   +        D  + +GK  SDH P+ ++ D
Sbjct: 121 GMRIDFVYASPALAGRVTGAAI-------DRDERKGKGASDHVPVMVELD 163


>gi|255035312|ref|YP_003085933.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
 gi|254948068|gb|ACT92768.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
          Length = 354

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/246 (12%), Positives = 68/246 (27%), Gaps = 45/246 (18%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              +  D D++ L E   +   + +  +  +             +     +    + +  
Sbjct: 123 NLIRKYDPDVLLLLETDRFWHESTLALQKDY-----------PYEVPVPLENTYGMLLYS 171

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K      Q   L+  +    +A        +   +G++I +  +H       ++L +T  
Sbjct: 172 KLELSDVQVRYLVDEEIPSIKAQ-------VALPSGQRIQLFCVHPTPPVPGENLHSTER 224

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
                     + L     + K S +P ++ GD N          D +  I     L    
Sbjct: 225 D---------KELLLVAKEVKASRLPCIVVGDLNDVAWS--YTTDLFTKIS--GLLDPRI 271

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                          + P+D+                    +   ++       SDH PI
Sbjct: 272 GRGFYNTFHAGMPLLRFPLDHVFCS--------------TDFKLVELARLENFSSDHFPI 317

Query: 299 SIDYDF 304
            +   +
Sbjct: 318 LLSLQY 323


>gi|293395492|ref|ZP_06639776.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291422176|gb|EFE95421.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 389

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/251 (9%), Positives = 59/251 (23%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L         D++   E  ++           W    +        +     D  
Sbjct: 142 RHADKLLALVAAERPDVLVAVETDAW-----------WETQLAPLERDYPYRLACPQDNL 190

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + V  +      +   L+  +        +         +G  + +  +H       +
Sbjct: 191 YGMHVYSRLPLSDAEIQYLVDKEIPSMHMLVQLP-------DGPAVRLHCVHPMPPSPTE 243

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + E+    +          L        ++ +P ++ GD N               +  +
Sbjct: 244 NDESEDRDA---------ELVLVGKSVVDAKLPVIVTGDLNDVAWSTTTRL----FLKVS 290

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L             +     + P+D+     +              +    ++     
Sbjct: 291 GLLDPRRGRGMFSTFHSGYPFLRWPLDHVFHSDD--------------FILGSLRRLPDI 336

Query: 292 LSDHCPISIDY 302
            SDH PI  + 
Sbjct: 337 GSDHFPIMAEL 347


>gi|71989536|ref|NP_001021584.1| EXOnuclease family member (exo-3) [Caenorhabditis elegans]
 gi|3879014|emb|CAB03235.1| C. elegans protein R09B3.1a, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|3941298|gb|AAC82328.1| exonuclease III homolog [Caenorhabditis elegans]
          Length = 288

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 76/304 (25%), Gaps = 74/304 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + V WN+  L      S +K                    + D+VFL E           
Sbjct: 35  KFVCWNVAGLRACVKKSDFKE---------------VLAEEPDLVFLGETKCKEW----- 74

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P      F +  + +  S   +       +  +   ++V +      G  D       R 
Sbjct: 75  PPEMEETFKNYTKTLVVSTEKNGGYAGVGLLSKCAPMKVHK------GIGDPEFDTAGRL 128

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +         K + +  ++ +                LL+++ + +        +   P
Sbjct: 129 IIA-----EFSKFYFIGAYVPNSGAKLVNLEKRGRWEKLLTEKMKEM--------DEKKP 175

Query: 205 FVIAGDFNRKINY-----LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA----------NK 249
            +  GD N   N        +N +        +        +    +             
Sbjct: 176 VIYGGDLNVAHNEIDLKNPESNRNKTAGFTDQERGWFSEMLELGFTDTFRAMHPDEKKYS 235

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +DY+V+       + +      +             SDH P+ +
Sbjct: 236 FWSYLANSRQKDVGWRLDYYVVSNRIMNKVKRSDIMSSV-----------MGSDHAPVVM 284

Query: 301 DYDF 304
             DF
Sbjct: 285 QIDF 288


>gi|71651097|ref|XP_814233.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70879188|gb|EAN92382.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 597

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 78/293 (26%), Gaps = 65/293 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++ ++S+N+  +   +  +               +  Y      DI+ LQE  S    
Sbjct: 2   PTEITVLSFNLWGIFNSKYRAARMARFA------AKVAHY------DIILLQEQFSKEDF 49

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-------QSYPLLGA 133
             +          S  R   + KR  +    + IAV  +             Q YP    
Sbjct: 50  ELIISNLP-----SEVREKRYFKRFPSAFYGSGIAVISRFPIKSALFFTFPLQGYPERVL 104

Query: 134 KDSFSRAGNRRAVELLV----------EINGKKIWVLDIHLKSFCFLDSLENTYSPSC-- 181
              +        + + V          +   + + + + HL +     +    +      
Sbjct: 105 HGDYYANKGASLLRIHVPCTTRRGVSPDPPYEDVLLYNTHLVAAYQKTARLLNWRDELYL 164

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------------------LGNN 221
            +   QA  L ++I+         +I GDFN                         L  +
Sbjct: 165 PVRLSQAISLAEFISSTSHPTDRVIIGGDFNATQRSLELQAMLILLRKRGYKLVSVLPPS 224

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---------IDYFVMDQN 265
             +   +   +  I       S  N   + ++            ID+     N
Sbjct: 225 IMYRPEMSEREKRINTATLTYSDANMFNSPKDGWFVEGGDVPCQIDHIFFTSN 277


>gi|260767805|ref|ZP_05876740.1| hypothetical protein VFA_000855 [Vibrio furnissii CIP 102972]
 gi|260617314|gb|EEX42498.1| hypothetical protein VFA_000855 [Vibrio furnissii CIP 102972]
          Length = 287

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 84/282 (29%), Gaps = 62/282 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++LV WNI           +K +     ++         + DA +V LQE     A+ 
Sbjct: 60  GTLKLVVWNI-----------YKQNRDTWQAELNRF-----SHDAQLVLLQEASMTPALQ 103

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   ++ W                        +    +++  L          + + R  
Sbjct: 104 RWISEHHW--------GGTRVNAFQVLGESAGVLNLSRHMPQLA---CGYTEMEPWLRLP 152

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 L    NG+ + V+++H  +F +                   + L   I + ++ 
Sbjct: 153 KSGIYALYPLSNGQVLAVVNLHAVNFSYGTQEYR-------------EQLTALIQELRQH 199

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++AGDFN   ++        +       +       D+R        N +P+D+  
Sbjct: 200 KGPILVAGDFN---SWSEKRTQVLRDALSALGMQEATFSPDNRAR----FINGLPLDHVF 252

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             Q   K                        SDH P+ +++ 
Sbjct: 253 YKQLTLKKAKA---------------PESDASDHNPLLLEFS 279


>gi|145350190|ref|NP_194819.3| unknown protein [Arabidopsis thaliana]
 gi|186515019|ref|NP_001119082.1| unknown protein [Arabidopsis thaliana]
 gi|332660427|gb|AEE85827.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Arabidopsis thaliana]
 gi|332660428|gb|AEE85828.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Arabidopsis thaliana]
          Length = 316

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 76/318 (23%), Gaps = 66/318 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++S+N++         L + S         L      +    ++  Q       V  
Sbjct: 4   SLSVMSFNLH-------DDLPEESPNSWLKRKDLCLTVITSYSPIVLCTQ-----QGVKS 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDS 136
                   +    +  I+ +     ND H  I   K+ V +L+         P +    +
Sbjct: 52  QLDYLQQGLPAYDQFGISRTGPGDANDEHCTIFFNKEKVELLEGGTFWLSESPSVPGSTA 111

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  A    A     ++ G +       + +    +        S  L  Q    L     
Sbjct: 112 WGSAVPCIATWATFQLKGAEPPGFSFQIVNTNLDEISPRARRRSALLTWQHIASL----- 166

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNL 251
                 +P V  G FN +           +      +          + + +        
Sbjct: 167 ---PPTLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNVALIRTYH 223

Query: 252 RNKI---------------------------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
             K                              D+ +            S   ++    +
Sbjct: 224 DFKGDKQGTVEFLKLIFRALCLCWDRQTQDLHTDWILYRGR--------SIVPVMCEIVN 275

Query: 285 IKSRGKRLSDHCPISIDY 302
            K      S H P+  ++
Sbjct: 276 DKIDDLYPSSHYPVFAEF 293


>gi|331700117|ref|YP_004336356.1| endonuclease/exonuclease/phosphatase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326954806|gb|AEA28503.1| Endonuclease/exonuclease/phosphatase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 316

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 77/298 (25%), Gaps = 66/298 (22%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L+L   L+   +     +R+V+ N++  +                 D     +   +  A
Sbjct: 85  LSLFGGLLIDKSHPGGGLRVVTHNVDAANT----------------DAAGTARDLVSSGA 128

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ L+E+             T+    +     +  +                    L  
Sbjct: 129 DLLALEELTPKA-------LPTYEHELAAAYPFHTVQGTVG----------------LWS 165

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
             PL   +         RA+   V  +   + V   HL S      +           + 
Sbjct: 166 RLPLSDVRPVDVAMDTTRALRATVTTDHGPLAVYVAHLGSVR----VFPRNGFWTESRNA 221

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             Q L + +    E     V+ GD N  ++       F               +      
Sbjct: 222 GVQTLAEAVA--AEPDQRVVLLGDLNGTMDD----RAFAGLTSRLRPAQEAAGQGFGFTW 275

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +     +   D  ++       +  ++   +              SDH P+  +  +
Sbjct: 276 PSAFPVVRS--DQILVRG-----VTAQASWVLP----------STGSDHRPVGAEVAW 316


>gi|150002692|ref|YP_001297436.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides vulgatus ATCC 8482]
 gi|237726697|ref|ZP_04557178.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|254882193|ref|ZP_05254903.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|265752215|ref|ZP_06088008.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|294776947|ref|ZP_06742408.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|319643247|ref|ZP_07997875.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A]
 gi|149931116|gb|ABR37814.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides vulgatus ATCC 8482]
 gi|229435223|gb|EEO45300.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|254834986|gb|EET15295.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|263237007|gb|EEZ22477.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|294449195|gb|EFG17734.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|317385151|gb|EFV66102.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A]
          Length = 343

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/338 (8%), Positives = 68/338 (20%), Gaps = 74/338 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           ++  ++ WNI                      Y  +      L  D V L E+ +Y    
Sbjct: 22  KEFTVLQWNIWQEGTVIPGG------------YDAIVNEIARLRPDFVTLSEVRNYE--- 66

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-----VRVLQQSYPLLGAKDS 136
                  +                S     T +  R        V   +  +  +    +
Sbjct: 67  ----NTNFTARLVQSLKEKGETYYSFYTYDTGLLSRYPITDSLTVFPEKNDHGSIYRLTA 122

Query: 137 FSRAGNRRAVELLVEINGKKIWVL-----DIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                        ++      + +         +        E       S      +  
Sbjct: 123 DMNGQKIAVYTAHLDYLDDAYYNVRGYDGSTWEEIPIPTTVEEVLKRNVASQRDDAIRLF 182

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNND-------------DFWKTIDPNDSLIRFP 238
            +   + + +    ++ GDFN   +     +                  +     L    
Sbjct: 183 IEQAKKDRAAGYTIILGGDFNEPSHQDWTEETKDLYDHHGFVIPWTVPVLLDEAGLKDAY 242

Query: 239 KEKDSRCNANKNLRNKI--------------------PIDYFVMDQNAYKFLIQESF--- 275
           +E                                    IDY          +   +    
Sbjct: 243 REFYPDVLNYPGFTYPSDNPAKPADKITWAPKADERDRIDYIWYYPEKGLKVKDAAIFGP 302

Query: 276 ---------SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     +    +  I+  G   +DH  + + + +
Sbjct: 303 KNSIVRAQRVQETSKDKFIEPLGVWPTDHKGVLVTFQY 340


>gi|297835128|ref|XP_002885446.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297331286|gb|EFH61705.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 460

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 71/300 (23%), Gaps = 81/300 (27%)

Query: 39  GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFY 93
               W        S    + +  + LDADI+ LQ++ +        ++ +         +
Sbjct: 163 PSCWWDQESFNGYSSRRSIAELLRELDADILALQDVKAEEETLMKPLSDLASALGMKYVF 222

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           +      +             A+  K      +   +    D       R  +++ VE+ 
Sbjct: 223 AESWAPEY-----------GNAILSKWPIKKWRVQRIADVDDF------RNVLKVTVEVP 265

Query: 154 G-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
               + V    L                 +   +Q   +            P ++ G  N
Sbjct: 266 WAGDVNVYCTQLDHL------------DENWRMKQIDAITR------GDESPHILLGGLN 307

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKD------------------------------ 242
             ++    +   W  I          K                                 
Sbjct: 308 -SLDGSDYSIARWNHILKVKYYEDSGKPTPRVEVMRFLKGKGYLDSKEFAGECEPVVIIA 366

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              N     +    +DY +    +    +  S+S +              SDH  + +D 
Sbjct: 367 KGQNVQGTCKYGTRVDYILASPESPYEFVPGSYSVVSSKGT---------SDHHIVKVDL 417


>gi|159042300|ref|YP_001541552.1| exodeoxyribonuclease III Xth [Caldivirga maquilingensis IC-167]
 gi|157921135|gb|ABW02562.1| exodeoxyribonuclease III Xth [Caldivirga maquilingensis IC-167]
          Length = 237

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 73/293 (24%), Gaps = 74/293 (25%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +SWN+N +         +                    D DI+ LQE+ S +    +   
Sbjct: 1   MSWNVNGIRSISRKGALRVFN-----------------DFDIILLQEIRSSDLPLDLLSM 43

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                        N     +    ++ +    +   +       +   D   R       
Sbjct: 44  GF-----------NVYGFPAVRKGYSGVLTLSRVEPINVIRGIGVKDFDDEGR------- 85

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
             ++ I     +V++ +        S  +        + +    L+           P +
Sbjct: 86  --VISIELPDFYVINAYFPRAGDDLSRLSFKLVFNRSIEKFTLELRMR--------KPVI 135

Query: 207 IAGDFNRKINYLGNNDDFWKT--IDPNDSLIRFPKEKDSRCNA----------NKNLRNK 254
           I GDFN   +   ++        + P +             +                 +
Sbjct: 136 ICGDFNAVYSRRDSSFWDDNHPGLTPLERQWLSEFIGKGFTDTFRLIHPNEIKYSWRSYR 195

Query: 255 -----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + IDY ++       ++     +               SDH PI +  
Sbjct: 196 DRGKAMRIDYCLVSSELTNRVVDADILDTE------------GSDHYPILLVI 236


>gi|312384136|gb|EFR28938.1| hypothetical protein AND_02511 [Anopheles darlingi]
          Length = 570

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 90/321 (28%), Gaps = 49/321 (15%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +  + ++ +V+WN++T   +         ++ +    + L  +       ++ LQE+ + 
Sbjct: 22  SHTSHRIYVVTWNVSTKFPENISLHKLLGLENSPDQDSHLPDFF------VIGLQEVNAQ 75

Query: 78  --NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLL 131
             N +  +F  + W   +               +    + +    R+K++  L+Q     
Sbjct: 76  PQNTLYNLFKDDLWTQKFKDILKE-RDYVVIKTEQMQGLLLSVFARRKHLLHLRQVETEY 134

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                    GN+ AV + + I G  I +++ HL +             +      Q Q  
Sbjct: 135 TRTGLGGIWGNKGAVSIRMNIYGSSICLVNAHLAA----HDHMLEERINDYERIVQEQKF 190

Query: 192 KDWITQKKESLVPFVIAGDFNRKIN-----YLGNNDDF---------------------- 224
                +           GD N ++                                    
Sbjct: 191 HVKAKETIFDHDYVFWFGDLNFRLTGEATTSPDEIRAMVARDELKQLIERDQLLLVRREG 250

Query: 225 --WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
             ++ +           + +   N     R     D  +    A       +    +   
Sbjct: 251 RAFQKLQERLPQFPPTFKFEHGSNEYDMKRRPAWTDRILY---AVNENNYRNVRLTVEQT 307

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
                    +SDH P++ ++ 
Sbjct: 308 SYKSHPSYNISDHKPVTSEFT 328


>gi|307178840|gb|EFN67403.1| Protein angel-like protein 2 [Camponotus floridanus]
          Length = 480

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 61/197 (30%), Gaps = 11/197 (5%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           +RL+S+NI    L E        ++ K         LL Q  +  DA+I+ LQEM   + 
Sbjct: 88  LRLLSFNILAQNLLEDHSYLYQDHNKKALSWKIRKPLLIQEIREADANIICLQEMQEDHL 147

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +  V P      F        + KR ++      +        +L  +   L        
Sbjct: 148 LDFVIP------FKQLGYEYLYKKRTNDKKDGLLLLYHSNQFVLLDYAKVELYQAGIELL 201

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +   +   + +       + +      +     +       LL  + +          
Sbjct: 202 NRDNVGIIAKLSLRDNPETQIVVATTHLLYNPRRNDVRLAQTQLLLAEIERFAFVENTIT 261

Query: 200 ESLV-PFVIAGDFNRKI 215
                P ++ GDFN + 
Sbjct: 262 GPKYLPIILTGDFNLEP 278


>gi|296270917|ref|YP_003653549.1| endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM
           43833]
 gi|296093704|gb|ADG89656.1| Endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM
           43833]
          Length = 331

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/282 (9%), Positives = 75/282 (26%), Gaps = 54/282 (19%)

Query: 13  LVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            +P   +     +++++ N+                    +D   +    + L  D++ L
Sbjct: 99  ALPSAPAATGPALKVLTANLFF----------------GHADAPAVVALVRRLRPDVLSL 142

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE         + P+    +  +    +   +        +   +  +     Q   P  
Sbjct: 143 QE---------LTPRALAALDAAGLGELLPYRHTEEGWGASGGGIFSRYPLTEQ---PGF 190

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                 +    R  +       G+ + ++++H  +             + +    Q   L
Sbjct: 191 SPGGGHAMPRARFTL-----PTGQAVEIVNVHTVAPLGP---------AVADWRAQLAAL 236

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                   E  V  V+AGDFN  +++                              +   
Sbjct: 237 PR-----PEPGVIRVLAGDFNATLDHADLRRVLAAG---YADAADATGTGLVPTWPSGRR 288

Query: 252 RNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
              +  ID+ +   +     ++     + + +        RL
Sbjct: 289 LPPLITIDHVLY--DRRASAVRTEVHTLPFTDHRAFFAELRL 328


>gi|53712549|ref|YP_098541.1| hypothetical protein BF1257 [Bacteroides fragilis YCH46]
 gi|52215414|dbj|BAD48007.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 341

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/359 (8%), Positives = 77/359 (21%), Gaps = 79/359 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           ++K +   +F LV  T       +  ++ WN+                      Y  +  
Sbjct: 1   MKKIIFMTLFLLVAMTGQSKGKGEFTVLQWNVWQEGTMVPGG------------YDAIVN 48

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               L  D V   E+ +Y         +           +     D  +       +  K
Sbjct: 49  EIVRLQPDFVTFSEVRNY---------HNTRFNERIVASLKEKGLDYYSFYTYGTGLLSK 99

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +      +                      V +    +  LD    +    D       P
Sbjct: 100 HPITDSLTVFPENGDHGSIYRLTSSVNGHKVAVYTSHLDYLDCAYYNVRGYDGSSWKEIP 159

Query: 180 S------------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND----- 222
                         S      +       +   +    +I GDFN   +           
Sbjct: 160 IPTTVEEVLKVNVASQRDDAIKMFIAQAQKDIANGYSVIIGGDFNEPSHLDWIEANKNLY 219

Query: 223 ---------DFWKTIDPNDSLIRFPKEKDSR-CNANKNL------------------RNK 254
                         ++ N  +  +     +   +                         +
Sbjct: 220 DHNGLVIPWTVTTLLEQNGFVDTYRHIYPNPLTHPGFTYPADNPLKEPGKLTWAPKADER 279

Query: 255 IPIDYFVM-DQNAYKF----------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ID+     +N              +++    +    ++ +       +DH  + + +
Sbjct: 280 DRIDFIFYKGKNLEAKKAIVFGPKGSIVRNKRVQETSKDNFLLPLDVWPTDHKGLLVTF 338


>gi|21225302|ref|NP_631081.1| hypothetical protein SCO7017 [Streptomyces coelicolor A3(2)]
 gi|7619772|emb|CAB88150.1| putative membrane protein [Streptomyces coelicolor A3(2)]
          Length = 301

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 65/293 (22%), Gaps = 66/293 (22%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L+P   + A  + +V  N+                    +D     +       D+V L
Sbjct: 74  LLLPAPEAGADDLVVVQHNV----------------SDENTDPEGTARALVRAGPDLVAL 117

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           +E+                      + +              +  +      L  S PL 
Sbjct: 118 EEL-------------VPPALEVYAKTLAPDYPYRTVRGTVGLWSKYP----LSGSRPLD 160

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                      R  +  +      ++ V   HL S         +     S     A  L
Sbjct: 161 IKPRGIEEEWERG-LRTVAHTPRGEVAVYVAHLPSVRVGAGGLASSRRDES-----AGLL 214

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            D +    E L   V+ GD N  ++                 L            +    
Sbjct: 215 GDALD--AEELRRVVLLGDLNGTVDDRALRPLTDSLNVAGRGL----------AFSFPAG 262

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                ID  +        L     +                SDH P+     +
Sbjct: 263 LPLARIDQVMARAGTVGALRTLPAT---------------GSDHLPVVAQVSW 300


>gi|295395470|ref|ZP_06805665.1| membrane protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971641|gb|EFG47521.1| membrane protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 301

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 66/245 (26%), Gaps = 59/245 (24%)

Query: 61  AKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
                 DIV LQE+ S +   + +   KN      S                   +  + 
Sbjct: 111 IIKRKPDIVTLQEIESLSGKIIREQMDKNFKHHKVSDT---------------VGLWSKW 155

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
               + +    L   +          A    V+ +   + V  +H+ S            
Sbjct: 156 PISDIEEIDLGLSWPR----------AFAATVKTDHGDVRVYSVHMPSVRPG-------- 197

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S SL +   Q +   ++  ++     ++AGDFN        +  F    D      R  
Sbjct: 198 -SESLRNAALQTVAQKVS--EDPAQRVIVAGDFN----STSTDRYFADLNDSLTDTRRAT 250

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                     K       +D+ ++       +   S + +              SDH  I
Sbjct: 251 GGGFGFTWPAKFP--VARVDHIMVRG-----MEPVSDTVLPRGT----------SDHRAI 293

Query: 299 SIDYD 303
               +
Sbjct: 294 VAGIN 298


>gi|74007944|ref|XP_850691.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1196

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 7   LSIVTLNVNGLNDP--------------IKRRRISDWIKKQDPSICCLQETHFRQKDTYS 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 53  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 102 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 139

Query: 204 PFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN          K N          T+D  D    +     +           
Sbjct: 140 --LILGDFNLALSILDRSSKHNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 197

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 198 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 237


>gi|293390053|ref|ZP_06634387.1| endoribonuclease L-PSP [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950587|gb|EFE00706.1| endoribonuclease L-PSP [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 296

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 90/280 (32%), Gaps = 63/280 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            + RL+ WN++           K          +   +       D V LQE+ +   +A
Sbjct: 73  NRFRLLVWNLH-----------KGQDAGWQQALSRFAK-----GRDFVLLQEVLNTQHLA 116

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                     + +      ++   +     + + +  K        Y      + + R  
Sbjct: 117 --------TQYSAQFPTALYASAFAYLQQQSGVEILSKFP---PHFYCAGSKPEPWIRIP 165

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A   L    GK + ++++HL +F       +           Q + L   I+  +  
Sbjct: 166 KVGAAMSLPLAGGKNLLLVNVHLINFELNPIAYSE----------QLRTLMQLISHHQG- 214

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P + AGDFN   +        ++ +  ++ +  +  ++ +    ++      P+D+  
Sbjct: 215 --PLIFAGDFNSWSS--------YRMLRIHELITEYGLQEVTFPQDHRLRFLGNPLDHIF 264

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +             + I    +  +S     SDH P+ ++
Sbjct: 265 IRG----------LNVINATTEPTES-----SDHAPLLLE 289


>gi|209964107|ref|YP_002297022.1| hypothetical protein RC1_0778 [Rhodospirillum centenum SW]
 gi|209957573|gb|ACI98209.1| hypothetical protein RC1_0778 [Rhodospirillum centenum SW]
          Length = 381

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/323 (11%), Positives = 88/323 (27%), Gaps = 41/323 (12%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P T   + ++ ++ +N++ L           ++ R   +   +R   +    DIV LQE 
Sbjct: 54  PVTGERSVELSVLIYNVHGLPWPFR-RTPGQALDRIGQELAGMRAAGRE--PDIVLLQEA 110

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHS------------------KRDSNNDIHTAIAV 116
               A                 R                          +   + + +  
Sbjct: 111 FIPRAARIGERAGYPNRVRGPRRRDPSPPASPDIDPEFLDSRRFLKGERAGKVVSSGLYA 170

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                 + +   P    + +       + V L+          +D+         +   +
Sbjct: 171 LSNYPILEKAQRPFKQYECAGYDCLANKGVLLVRVQVPGVPVPVDLMTTHLNAQRASGVS 230

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
              +    ++Q   + D++   ++   P +  GDFN +      +    +   P   +  
Sbjct: 231 LKRALYAHNRQIDEIDDFLDSHRDPRNPLIFGGDFNMRGARERLDYAMSR--RPYPFVRY 288

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS--------- 287
           +     + C+   +     P   ++  Q+   F      +        +           
Sbjct: 289 YCTVTANDCDIRMSWDGDEP---WLATQDLQGFDDGACVAVRPVRVAALFDAPVPDTPDE 345

Query: 288 ----RGKRLSDHCP--ISIDYDF 304
               RG+ LSDH    +     +
Sbjct: 346 PAALRGRLLSDHDGYLVVYRLSW 368


>gi|108761449|ref|YP_628640.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108465329|gb|ABF90514.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 473

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 77/266 (28%), Gaps = 45/266 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++   + LS     S       R            K +  DIV +QE    +    
Sbjct: 215 PIRVMA---SNLSSGNYQSYDPGHGIR----------LIKGVHPDIVLMQEFNYGS---- 257

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               +             H  R++   I     +  +   +    +P         R  N
Sbjct: 258 -NSASDIRSLVDQIAPGFHYSRETGAQIPNG--IISRWPIIQFGQWPDP-------RVSN 307

Query: 143 RRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R      ++I G + +W + +HL             + S S  + +AQ + + +  +   
Sbjct: 308 RDFAWARIDIPGPRDLWAVSVHL------------LTSSSSNRNAEAQSIVNEVRSQIPE 355

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               VI GD N           F + +           + +     N N       D  +
Sbjct: 356 DDYLVIGGDLNTDSFSESCFATFRQVVTTAGPHPA---DHNGNTGTNSNRNKP--YDQIL 410

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKS 287
           +DQ+  ++          +    +  
Sbjct: 411 VDQDLRQYQQATVIGSSTFPNGLVLD 436


>gi|154291711|ref|XP_001546436.1| hypothetical protein BC1G_15146 [Botryotinia fuckeliana B05.10]
 gi|150846646|gb|EDN21839.1| hypothetical protein BC1G_15146 [Botryotinia fuckeliana B05.10]
          Length = 578

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/259 (8%), Positives = 59/259 (22%), Gaps = 37/259 (14%)

Query: 67  DIVFLQE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           DI  +QE  +   +    +     W +++S  +    +S             +R +    
Sbjct: 6   DIFLMQETKIQRKDLRDDMVLVPGWDVYFSLPKYKKGYSGVAIYTRNSVCAPIRAEEGIT 65

Query: 124 LQQSYPLLGAKDSFSRAGNR-------------RAVELLVEINGKKIWVLDIHLKSFCFL 170
              + P             +                   ++  G+ + +L+        +
Sbjct: 66  GVLTPPNSTTSFRDLPKDQQIGGYPTGAQLQDYFLDAATLDSEGRCV-ILEFPAFILIGV 124

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDFWKT 227
                               L    +   +        +         +     +   + 
Sbjct: 125 YCPATRDETRDEFRIGFLNALDTRWSNTYQPLLAGYLIISLVGGKVIGDRDEGTEP--QV 182

Query: 228 IDPNDSLIRFPKEKDSRCN----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
           +          ++    C       +       IDY +  ++   +    +         
Sbjct: 183 MWDISRGFHPTRKGMFTCWDQKMNARPGNFGSRIDYVLCSEDMKDWFQDSNIQ------- 235

Query: 284 DIKSRGKRLSDHCPISIDY 302
                G   SDHCP+   +
Sbjct: 236 ----EGLMGSDHCPVFATF 250


>gi|307747194|gb|ADN90464.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni M1]
          Length = 198

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 43/179 (24%), Gaps = 42/179 (23%)

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
           ++E   K I + +I+  +    +   N               L              +I 
Sbjct: 37  VLEHRFKNIALFNIYFPNGQKDEERLNFKMKFYVDFLVYLDKLLK-------DGFEIIIC 89

Query: 209 GDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           GD N                    L     +   +     +  F +              
Sbjct: 90  GDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSY 149

Query: 254 K---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +           IDYF + +     L      + ++            SDH P+ I+ D
Sbjct: 150 RMKARERNVGWRIDYFFISKGLKDKLKNAFIRDDIF-----------GSDHAPVGIEID 197


>gi|242223824|ref|XP_002477476.1| predicted protein [Postia placenta Mad-698-R]
 gi|220722901|gb|EED77325.1| predicted protein [Postia placenta Mad-698-R]
          Length = 266

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 76/292 (26%), Gaps = 35/292 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADIVFLQEMG 75
              +RLV+WN+N             S  R     T L    +           + LQE+ 
Sbjct: 1   PSSLRLVTWNVN---------SATYSQLRLRCILTYLETLLRPHGFGPLEPCCILLQEV- 50

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           S NA+  +   +      +   +I                              L  A  
Sbjct: 51  SLNALDFLLSID---WVLNDFLIIPAGSVQWPRGAQYGNVTLISKNIPFVAGQWLNFADS 107

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           S  R      V +    +G+ + +   +                +  + + Q  ++ + +
Sbjct: 108 SMGRNALITDVAVRHSQSGRTLTLRIANTHLESLP--------ENALIRAAQLSYIAEKL 159

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--KNLRN 253
            +        V+AGD N        ND               P+ + S       +    
Sbjct: 160 RRPTVHGG--VVAGDMNAIC----PNDQVIHRQAGLVDAHPGPENERSFTWGYQPRTAFP 213

Query: 254 KIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +D          +  +Q    E       +++     SDH  +     F
Sbjct: 214 PGRLDRMYFTPQRMPWDSVQLKVDEPSRIGMGLQAGNLWASDHYGLMSTVRF 265


>gi|149742161|ref|XP_001498524.1| PREDICTED: synaptojanin 1 isoform 1 [Equus caballus]
          Length = 1576

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 93/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGILEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVRERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                        S     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVAMID 867


>gi|149742163|ref|XP_001498585.1| PREDICTED: synaptojanin 1 isoform 2 [Equus caballus]
          Length = 1295

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 93/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGILEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVRERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                        S     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVAMID 867


>gi|119946106|ref|YP_943786.1| hypothetical protein Ping_2456 [Psychromonas ingrahamii 37]
 gi|119864710|gb|ABM04187.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
          Length = 279

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 76/283 (26%), Gaps = 59/283 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +    L+ WNI+  +                          +    D +  QE+     +
Sbjct: 42  SDTFSLIVWNIHKENLHPQF-------------IENFETLIQEYPCDFLLFQEVKFPKKI 88

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A V    ++ +  + E           +     +    K       S+     +      
Sbjct: 89  ASVLDAFSYAMASNIET----------SQHIYGVLTATKIAFTTISSHLTHQREVGLITH 138

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +       +  +G+ + +++IH  +F                +    + L+        
Sbjct: 139 KSMLITHHKL-PDGRTLHIVNIHGINFVS--------------IKGFIKELEKIKAVLHS 183

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++AGDFN          + ++     +               +       P+D+ 
Sbjct: 184 CSGPIIVAGDFNNWTKKRIMALETFQHALGLEKADIQE-------GHHVKHIFAKPLDHI 236

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +   K L  E+               K++SDH PI   + 
Sbjct: 237 FYRE--LKLLQAEAI------------DTKKISDHNPIYATFS 265


>gi|254520361|ref|ZP_05132417.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA]
 gi|226914110|gb|EEH99311.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA]
          Length = 263

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/269 (10%), Positives = 73/269 (27%), Gaps = 43/269 (15%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLI 99
                L +       D++  QE+               +    +  K    +     + +
Sbjct: 18  EKIKYLAEIINEKQYDVISFQEVSQSIEKSVVSGDIKEDNFIYLLNKELEKLGEFNYKYV 77

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
                   +     +++  ++     + + +  + +      +R+ ++  + I+ KKI  
Sbjct: 78  WDFSHIGYDIYEEGLSILTRHEIEDVELFYITKSSEKTFYK-SRKIIKATITIDNKKINF 136

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
              HL    + D               Q   L   +           + GD N       
Sbjct: 137 FTCHL--GWWDDEE--------ESFKYQVDNLMTKVNGIS------FVMGDINNNALIRN 180

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQES 274
              D+  +    D+     ++ +      +    +       +D    + +         
Sbjct: 181 EGYDYLLSKGLIDTYDIALEKDNGITVQGEIAGWEGKTENKRLDIIFTNTDVNVKKSNVI 240

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           F++I  +          +SDH  +  D D
Sbjct: 241 FNDINKSI---------ISDHYGVEADID 260


>gi|329574088|gb|EGG55665.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1467]
          Length = 274

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 53/275 (19%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKV----------------FPKNTWCIFY------- 93
           + +   + +++I+ LQE+    A  KV                  ++ +           
Sbjct: 23  IAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPVATQTPVHEDNFAYLIVQYLAEK 82

Query: 94  -STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                                 A+  K    L     L+      +    R+ +    E 
Sbjct: 83  GQHYYWCWEMSHIGYAIYEEGNALLSKCP--LTSEALLISESQEPTNYRTRKILVAETES 140

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +   + V+  H   +             C+  + +   L+ ++   +    P VI GD N
Sbjct: 141 SKGTLTVVSGHFSWWETP----------CTGFAYEWLQLEKYLAMGQ---QPLVILGDLN 187

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267
                 G        +   D+ +   +         K    +       IDY  +     
Sbjct: 188 NPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYAFV----- 242

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +    Y       +   +SDH  + I  
Sbjct: 243 ----PKQWHVRKYEVIFDGRKTPIVSDHFGLLIQL 273


>gi|300176314|emb|CBK23625.2| unnamed protein product [Blastocystis hominis]
          Length = 252

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 41/169 (24%), Gaps = 32/169 (18%)

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK-- 214
               D       +        S  CS   +  + + D +   K      ++ GDFN    
Sbjct: 64  FTFFDNCAILNVYFPCGSEEDSARCSFRERFYELIMDLVKIIKVDYPNCILLGDFNTAIA 123

Query: 215 ----------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR---------NKI 255
                              F         +  F     S  NA                 
Sbjct: 124 CRIGWRLCYHPKSSSFYLAFMIRDGGCGMIDCFRALYPSERNAYSCFNTKLKGRINNFGT 183

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            IDY V  +     L++ +                  SDH P+  ++DF
Sbjct: 184 RIDYIVCTRPLRNCLVECAIR-----------SDVTGSDHLPVVAEFDF 221


>gi|319945181|ref|ZP_08019443.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599]
 gi|319741751|gb|EFV94176.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599]
          Length = 162

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 35/153 (22%)

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------ 223
           +            +     + + K+S    ++ GD+N     +   +             
Sbjct: 18  SSEERLQRKFVFMEAFARHMQELKDSGREIILCGDWNVAHKEIDLKNWRSNQKNSGFLPE 77

Query: 224 ---FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLI 271
              +  ++      +   ++ D R        N+           IDY +          
Sbjct: 78  ERQWLSSLLDEIGFVDVFRQLDPRPEQYTWWSNRGQAWAKNVGWRIDYQIATPGIAATAT 137

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +               + +R SDH P+ IDYD+
Sbjct: 138 RAEI-----------YKDERFSDHAPLIIDYDW 159


>gi|318062079|ref|ZP_07980800.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SA3_actG]
 gi|318077408|ref|ZP_07984740.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SA3_actF]
          Length = 326

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 76/291 (26%), Gaps = 25/291 (8%)

Query: 25  RLVSWNINTLSEQEGVSLWKNS-VKRTTSDYTLLRQYAKNLDADIVFLQEM------GSY 77
            +VSWNI   +     +                L +     +AD V LQE          
Sbjct: 34  TVVSWNICGEAGGGRGAAGYCPYRNEPERKTEELARLVVAENADAVVLQETCGGPDGAHE 93

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQSYPLLGAK 134
            ++ +         F   +R  + +   +      A A R      +     +       
Sbjct: 94  KSLREKLGAGWSFAFAPVKRPDDKNADGTPRGDPEASACRGSLAGGILGNLIAVRGTITA 153

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           ++   A       + V+    +   +     S C    +     P       Q Q ++ +
Sbjct: 154 EAHENALPADPAGVSVQRLPVQCVAVAEWSTSVCDTHIIPGASDPRVPA---QIQAVRAF 210

Query: 195 ITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
           + +          V+ GDFNR        D   K +                 +      
Sbjct: 211 VAEFGSAHGTARTVLGGDFNRAAA-----DATMKPLTS-AYENCVSGATHHGWDNAAKAH 264

Query: 253 NKIPIDYFVMD----QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            +   D+  +      +A+     ES        +         SDH P+ 
Sbjct: 265 RRNEFDHLFVTRPAEGSAFSSCSVESALMDTTENEADSGDPNGFSDHAPVV 315


>gi|300773137|ref|ZP_07083006.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300759308|gb|EFK56135.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 645

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 79/311 (25%), Gaps = 76/311 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++ WNI       G            +  + +    +N  ADI+ +QE          
Sbjct: 376 VRVLQWNIWHGGVHLGK----------EAGRSRIADLIRNTKADIITMQE---------- 415

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    S  + +    +  ++  + A+  R     +                    
Sbjct: 416 ----GYSAQDSIAQALGFHLQTKSSKDNLALLSRYPVESIKSSEPFKSNPAKID------ 465

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ-------WLKDWIT 196
                    NGK+I + D  L+     +      +         A+        +++ I 
Sbjct: 466 -------LPNGKRILINDCWLRYAYRPEYTCAYQNTGMDPRIWIAEDSALALTDIRNLIE 518

Query: 197 QKKE-----SLVPFVIAGDFNRKINYLGNND-------------DFWKTIDPNDSLIRFP 238
           +  +       +P +IAGDFN   +                      K +        F 
Sbjct: 519 KDIDPYIDSPDMPVIIAGDFNSCSHMDWTERTRSLHYGYGPVDFPVSKFMYEQGFSDSFR 578

Query: 239 K-------EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +        +               ID+           I         + DDI      
Sbjct: 579 ELNPDELTHQGGTFAPIYGQLQNARIDFIYYKGGI--KAISSKIVRTSPDIDDI-----W 631

Query: 292 LSDHCPISIDY 302
            SDH  +   +
Sbjct: 632 ASDHAAVLTIF 642


>gi|270007917|gb|EFA04365.1| hypothetical protein TcasGA2_TC014661 [Tribolium castaneum]
          Length = 136

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 32/118 (27%), Gaps = 14/118 (11%)

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK-------------DSRCN 246
            + V  ++ GDFN               +  ++ +                     S   
Sbjct: 17  GNTVRVILCGDFNSVPTSTVYEFLTKGNLSRDNKVFEKTVNNVNLRHDFQLQSACGSPTY 76

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYD 303
            N     +  +DY  ++++  +      F         +        SDH  + +D +
Sbjct: 77  TNYTDDFRGCLDYIFIEKDKMRVCNVVPFPKNEDLEAFEGLPNEVYPSDHLALVVDLE 134


>gi|225443954|ref|XP_002272288.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1551

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 75/288 (26%), Gaps = 65/288 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K R+++WN+   +  +                 +++   K    D+V LQE         
Sbjct: 2   KFRMLTWNVRGANNCD--------------KRKVIKALIKKHKVDLVCLQETKIQEMSKG 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +        +     + +             I V                         N
Sbjct: 48  IICSLGVGRYLDWGAVDSRGAAG-------GIVVFWD----------------------N 78

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    + +   G  I  +  + +                       + L           
Sbjct: 79  RVLELVDIHKGGCSISCIFKNSEDGFMWMFTGVYGPILRRERESFWEELGAIKGLW---N 135

Query: 203 VPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            P+  AGDFN  ++    N           F + I+  +             +   N ++
Sbjct: 136 GPWCAAGDFNAILSPEERNRGGRLNSNMRRFVEIIEDLELKDVPLVGGPFTWSGGVNNQS 195

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +D F++++            +  + +       + +SDH P+ +D
Sbjct: 196 FSRLDRFLINEG----------WDNHFGDVRQCVLPRPVSDHFPVLLD 233


>gi|319442024|ref|ZP_07991180.1| hypothetical protein CvarD4_09711 [Corynebacterium variabile DSM
           44702]
          Length = 318

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 75/282 (26%), Gaps = 61/282 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A  VR++S N                     +    L Q A+ +DADIV L E     A 
Sbjct: 96  ADTVRILSVNTWY----------------HQASDEFLAQTAREMDADIVVLPESSDVQAS 139

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A     +   +   + R              TA+ VR+  +                   
Sbjct: 140 AVADATDLELLQPVSTRTRG---------GGTALLVRETWMTEAAAE------------- 177

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                 +L +  +   +  L+         ++  +++             + D       
Sbjct: 178 ---SVADLHLTRHQNPVVELENLTMMGVHTNAPAHSHLVDG-----WVTEMVDLRDWASG 229

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P V+AGDFN    +        ++ +  D                 +    + +D+ 
Sbjct: 230 VDGPLVMAGDFNSTTAHPELRRLAGRSAEMTDCGGGLFAAPTWPRAGTPSPVPVLRLDHI 289

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++                     D    G R SDH  I  D 
Sbjct: 290 LVRG---------------LTCQDSGVVGVRGSDHAGIWADL 316


>gi|194397749|ref|YP_002037245.1| hypothetical protein SPG_0530 [Streptococcus pneumoniae G54]
 gi|194357416|gb|ACF55864.1| conserved hypothetical protein [Streptococcus pneumoniae G54]
          Length = 335

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 85/291 (29%), Gaps = 50/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +    +  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSAPNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA     V V +       A
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIAPVTVIVIVKKSYGFYTEA 196

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           K   +    R    +L         ++ +H                   L+    Q L  
Sbjct: 197 KTFHT---TRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 241

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 242 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNALPPFERGTWNSQSPKLF 297

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 298 NATIDHILLPKNH-------------YYVRDLDIVSFQNSDHRCIFTEITF 335


>gi|2072967|gb|AAC51273.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 76/292 (26%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE         +
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQE-------THL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++T  +     R      + +       +A+                           
Sbjct: 47  MCRDTHRLKIKGWRK---IYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQDLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ +  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHILGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|332322210|emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 67/282 (23%), Gaps = 61/282 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++SWNI  L                    + LR+     +   + +QE        K+
Sbjct: 2   INILSWNIRGLGA--------------RIKRSALRKMISIHNPLFITIQETKLGEIDPKL 47

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W                        I        +   S  +             
Sbjct: 48  IRS-IWNSNEVAWTFSPADGNAG------GILTLWSKTFITVSSSHVSKNW--------- 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV   +        ++ I+                      ++A    + +     S +
Sbjct: 92  IAVRGTISHLNWDCSLISIYNPCSV----------------EERAVVWGEILEFWTTSKL 135

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPID 258
           P +I GDFN  +               ND           +   +         +K  +D
Sbjct: 136 PCLIIGDFNETLASNDRGSLAISQSGSNDFRQFVQSLQLTEIPTTERFTWFRGNSKSKLD 195

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              ++                Y    +    + LSDHCP+ +
Sbjct: 196 RCFVNPE----------WLTHYPTLKLSLLNRGLSDHCPLLL 227


>gi|73960892|ref|XP_547407.2| PREDICTED: hypothetical protein XP_547407 [Canis familiaris]
          Length = 544

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 63/205 (30%), Gaps = 16/205 (7%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 166 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 225

Query: 79  AVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             A++        +   Y                 H+  A+   N     +    L  +D
Sbjct: 226 YGAEIRPSLESLGYHCEYKMRTGRKPDGCAICFK-HSKFALLSVNPVEFYRRDVPLLDRD 284

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           +         + L  +I      V+ +      +            + L+     +    
Sbjct: 285 NVG-----LVLLLQPKIPSAASPVICVANTHLLYNP---RRGDIKLTQLAMLLAEISSVA 336

Query: 196 TQKKESLVPFVIAGDFNRKINYLGN 220
            QK  S  P V+ GDFN        
Sbjct: 337 HQKDGSFCPIVMCGDFNSVPGSPLY 361


>gi|332701930|ref|ZP_08422018.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332552079|gb|EGJ49123.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 352

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 64/252 (25%), Gaps = 46/252 (18%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D   L +    L  D+V L E+              W    S  R         + +  
Sbjct: 117 DDPQPLLRLLAELSPDMVLLLEVNGR-----------WMDKLSDLRSSYPHHVGQSLENT 165

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             IA+  +   +  +   L+          +   +  LV     +I  L           
Sbjct: 166 YGIALFSRLELIDARVRHLVEP-----DVPSIHGLASLVSGEVVEIHGLHPKPPRPQSGG 220

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + E                L     + ++S  P ++ GD N            ++ I   
Sbjct: 221 TTERD------------AELILIAREARDSEHPVIVMGDLNDVAWSHTTR--LFRRIS-- 264

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           + L                   + P+D+    ++                  + K     
Sbjct: 265 EMLDPRVGRGHFPTYPVALPFLRYPLDHVFHSRSLR--------------LVEFKRLPDI 310

Query: 292 LSDHCPISIDYD 303
            SDH P+  ++ 
Sbjct: 311 GSDHFPVYAEFS 322


>gi|261885381|ref|ZP_06009420.1| cytolethal distending toxin [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 276

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 86/306 (28%), Gaps = 55/306 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M +  +LAL+   +   A   +  ++ +WN+   S         N  +  T D       
Sbjct: 1   MKKFIILALLSASLSFAAI--EDYKIATWNMQGSSASTESKWNVNVRQLITGDAA----- 53

Query: 61  AKNLDADIVFLQE--------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
                ADI+ LQE        + +        P + +     T    N      +     
Sbjct: 54  -----ADILMLQESGSIPTTAVNTQRVFQAGTPVHEYTWNLGTTPRPNMVYIYHSRIDVG 108

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
           A  V    V   +     +   +    A  R A+ + +  +     V             
Sbjct: 109 ANRVNLAIVSTRRADNVSIIYPEI---AAARPAIGIHIRND-----VFFTAHALASGGPD 160

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
             +           Q               + +VI GDFNR+ +           ++   
Sbjct: 161 APSLIHRVHDSFIGQ-------------GGINWVIGGDFNREPSS------LLGALEGGL 201

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                    ++   ++        +DY V   +        + + IL   +    R +  
Sbjct: 202 RNRVSIIAPNAPTQSS-----GRTLDYLVAGNSGTSAFSAPAIAAILMLAN---MRAQIT 253

Query: 293 SDHCPI 298
           SDH P+
Sbjct: 254 SDHVPV 259


>gi|148653587|ref|YP_001280680.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1]
 gi|148572671|gb|ABQ94730.1| Endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1]
          Length = 387

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/252 (11%), Positives = 56/252 (22%), Gaps = 45/252 (17%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           +   L         DI+   E               W                   D   
Sbjct: 118 NTQALVDLVSQKQPDILITLESDKK-----------WERALEAIEPEYPYTVKVPLDNLY 166

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + +  K   +  +   LL           R         N + IW+  +H       ++
Sbjct: 167 GMHLYSKLELIDPEVKYLLIDDIPSIHTQVRL-------SNDEVIWLYCLHPMPPSPTEA 219

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            ++T   +          L       K +    ++AGD N            ++ I    
Sbjct: 220 DKSTTRDA---------ELLIVGRHIKANDQTAILAGDLNDVAWSKTT--LMFQRIS--G 266

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                   +  +D+                    +   +I+      
Sbjct: 267 LLDPRIGRFFINTFHVNYPFLRWALDHIFHSP--------------CFTLVNIERLPSIG 312

Query: 293 SDHCPISIDYDF 304
           SDH P+     +
Sbjct: 313 SDHFPVLTTLQY 324


>gi|65317062|ref|ZP_00390021.1| COG3568: Metal-dependent hydrolase [Bacillus anthracis str. A2012]
          Length = 227

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 79/236 (33%), Gaps = 46/236 (19%)

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN--R 143
              +   +    + N             ++   K      + + L G +    R  +  R
Sbjct: 16  GKNYDTKWVPVPITNPMGYA-----EAGLSTFSKYTVQTAKRFQLPGMEPWPKRLFDLDR 70

Query: 144 RAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             VE  + +N GK + ++++HL +          Y     +  QQ ++LK+++ +  ++ 
Sbjct: 71  AIVEHSIPVNNGKHVRLVNLHLSA----------YDEGGKIRKQQVEFLKEYMNKHYKNG 120

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR---------- 252
              ++ GD+N+ ++ +  +D  +    P   +       D       +            
Sbjct: 121 DYVIMGGDWNQLVSDVQLSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKK 180

Query: 253 ------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     ID F++  N    ++     ++ +            SDH P+S  +
Sbjct: 181 YVEGENFVTIIDGFIVSPN--VEIVNVQGKDLKFEN----------SDHNPVSAVF 224


>gi|271964023|ref|YP_003338219.1| hypothetical protein Sros_2500 [Streptosporangium roseum DSM 43021]
 gi|270507198|gb|ACZ85476.1| hypothetical protein Sros_2500 [Streptosporangium roseum DSM 43021]
          Length = 334

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 78/294 (26%), Gaps = 66/294 (22%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           F  P  A     +R+++ N+                 R  +D   +      L  DI+ L
Sbjct: 99  FADPAPAPGGTALRVLASNL----------------ARGDADTKTIMDLVVRLKPDILTL 142

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ +  A  ++                      S                 +   +PL 
Sbjct: 143 QEL-TPEAAERLEKAGIRKALPHMVGEPTPGVWGSG----------------VYARFPLR 185

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             + + +    R++V +      + + ++ +H  +  F               +  AQ L
Sbjct: 186 ADQAALNYGNFRQSVAV---APERNLQIVSVHPCAPRFD-----------YKAACWAQGL 231

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           +        +    ++AGDFN  +++    +                 +        +  
Sbjct: 232 RALPRAGTGAEPYRILAGDFNATLDHAIMRELLATGYRDAAD---VTGQGLIPTWPQQGW 288

Query: 252 R--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                + +D+   D          SF                  DH  +  + +
Sbjct: 289 EPVPGVALDHVFADARIAVR----SFGVHRVPGT----------DHRSVFAELE 328


>gi|291457367|ref|ZP_06596757.1| hypothetical protein BIFBRE_04610 [Bifidobacterium breve DSM 20213]
 gi|291381202|gb|EFE88720.1| hypothetical protein BIFBRE_04610 [Bifidobacterium breve DSM 20213]
          Length = 317

 Score = 56.9 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/279 (9%), Positives = 66/279 (23%), Gaps = 60/279 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++++N+                 +  +D   +    ++   +++ LQE           
Sbjct: 97  RVMTFNVY----------------KGQADAQSIVNLVRDQRVEVLALQETTDDFVKQ--- 137

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                 +  +           S++D      +             +  +           
Sbjct: 138 ------LTEAGIEHYLPYAHVSSSDGVYGNGLWSAAPLKDVVDDEVNSSASFMPSG---- 187

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V++ G +I  + +H  +       +   S            L +    +  +   
Sbjct: 188 ----TVDMGGNQIRFVSVHTTAPVPGYWGQWKRS------------LDELGLMRSHTDAR 231

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    +                       N +        ID+ V+D 
Sbjct: 232 YIFMGDFNATYDHTPFREFLGNRFVDAAHQSGHGFTFSWPTNRSYLPTFAG-IDHVVLDT 290

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                +      SDH  +     
Sbjct: 291 GMTAGQ--------------CQIAKIAGSDHAALLATIS 315


>gi|212690990|ref|ZP_03299118.1| hypothetical protein BACDOR_00480 [Bacteroides dorei DSM 17855]
 gi|212666222|gb|EEB26794.1| hypothetical protein BACDOR_00480 [Bacteroides dorei DSM 17855]
          Length = 343

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/338 (8%), Positives = 67/338 (19%), Gaps = 74/338 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           ++  ++ WNI                      Y  +      L  D V L E+ +Y    
Sbjct: 22  KEFTVLQWNIWQEGTVIPGG------------YDAIVNEIARLRPDFVTLSEVRNYE--- 66

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-----VRVLQQSYPLLGAKDS 136
                  +                S     T +  R        V   +  +  +    +
Sbjct: 67  ----NTNFTARLVQSLKEKGETYYSFYTYDTGLLSRYPITDSLTVFPEKNDHGSIYRLTA 122

Query: 137 FSRAGNRRAVELLVEINGKKIWVL-----DIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                        ++      + +         +        E       S      +  
Sbjct: 123 DMNGQKIAVYTAHLDYLDDAYYNVRGYDGSTWEEIPIPTTVEEVLKRNVASQRDDAIRLF 182

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNND-------------DFWKTIDPNDSLIRFP 238
                + + +    ++ GDFN   +     +                  +     L    
Sbjct: 183 IKQAKKDRAAGYTIILGGDFNEPSHQDWTEETKDLYDHHGFVIPWTVPVLLDEAGLKDAY 242

Query: 239 KEKDSRCNANKNLRNKI--------------------PIDYFVMDQNAYKFLIQESF--- 275
           +E                                    IDY          +   +    
Sbjct: 243 REFYPDVLNYPGFTYPSDNPAKPADKITWAPKADERDRIDYIWYYPEKGLKVKDAAIFGP 302

Query: 276 ---------SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     +    +  I+  G   +DH  + + + +
Sbjct: 303 KNSIVRAQRVQETSKDKFIEPLGVWPTDHKGVLVTFQY 340


>gi|302669280|ref|YP_003832430.1| exodeoxyribonuclease III Xth [Butyrivibrio proteoclasticus B316]
 gi|302396944|gb|ADL35848.1| exodeoxyribonuclease III Xth [Butyrivibrio proteoclasticus B316]
          Length = 216

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/240 (10%), Positives = 57/240 (23%), Gaps = 50/240 (20%)

Query: 89  WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
              ++     +  S R+     +       K    +  S+P +GA D             
Sbjct: 1   MKAYFPDHDYVYVSSREPARKGYAGTMALYKRDIKVVASFPEIGAPD------------- 47

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
            ++  G+ I +                          +       ++    + + P +  
Sbjct: 48  TMDSEGRMITLEHDKFFFNLVYTPNAGDGLKRLKERQEWDVQYTKYLKS-LDEVKPVISC 106

Query: 209 GDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           GD+N                           +  +     +  F        N       
Sbjct: 107 GDYNVAHEEIDLANPDSNHMSAGFTDEERAGFTNLLSAGFVDTFRHVHGDIPNVYSWWAQ 166

Query: 254 K----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +            IDYF++       + +    +    +           DH PI+++ +
Sbjct: 167 RIKTSKINNSGWRIDYFLVSDRIKDKVTRSDMLDSGARQ-----------DHTPIALEIE 215


>gi|157110905|ref|XP_001651302.1| skeletal muscle/kidney enriched inositol 5-phosphatase [Aedes
           aegypti]
 gi|108883903|gb|EAT48128.1| skeletal muscle/kidney enriched inositol 5-phosphatase [Aedes
           aegypti]
          Length = 499

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/344 (12%), Positives = 95/344 (27%), Gaps = 70/344 (20%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNI-----NTLSEQEGVSLWKNSVKRTTSDYTL 56
            R+++L ++         V  ++ +V+WN+       LS  + + L  +  + T      
Sbjct: 43  RRRFLLCML-------PIVEGRIYIVTWNVSTKFPENLSLHKLLGLESSPSQDTDL---- 91

Query: 57  LRQYAKNLDAD--IVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
                     D  ++ LQE+ +   N +  +F  + W   +               +   
Sbjct: 92  ---------PDFFVIGLQEVNAQPQNTLYNLFKDDMWTQKFKDLLKE-RDYVVIKTEQMQ 141

Query: 113 AIAV----RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
            + +    R+K++  L+Q              GN+ AV + + + G  I +++ HL +  
Sbjct: 142 GLLLSVFARRKHLLHLRQVETEYTRTGLGGIWGNKGAVSIRLNVYGCSICLVNSHLAA-- 199

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-----YLGNNDD 223
                      +      Q         +           GD N ++             
Sbjct: 200 --HDHMLEERINDYDKIVQEHKFHVKTKETIFDHDYVFWFGDLNFRLTGEATTSAEEIRA 257

Query: 224 F------------------------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                                    +  +           + +   N     R     D 
Sbjct: 258 MVARDELKKLIEKDQLLLVRRERRAFDKLQERLPQFPPTFKFEHGTNDYDMKRRPAWTDR 317

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +    A K     +    +            +SDH P++ ++ 
Sbjct: 318 ILY---AVKENNYRNVKLTVEQTSYKSHPSYNISDHKPVTSEFT 358


>gi|297518228|ref|ZP_06936614.1| putative metal-dependent hydrolase [Escherichia coli OP50]
          Length = 148

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 27/167 (16%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNN 108
             LR   + + ADIV LQE+   + V  +    +P  +   F +     +  + +     
Sbjct: 1   PELRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYP 60

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKS 166
           + H   AV  +                S   A  R  +   +     GK I V+ +HL  
Sbjct: 61  EGHHGNAVLSRYPIE-----HYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGL 115

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
                          +    Q   L +W+ +      P ++AGDFN 
Sbjct: 116 R-------------EAHRQAQLAMLAEWVNE-LPDGEPVLVAGDFND 148


>gi|295444804|ref|NP_001128591.2| protein angel homolog 2 [Rattus norvegicus]
 gi|149041025|gb|EDL94982.1| angel homolog 2 (Drosophila) (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 522

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI---NTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI     L +        +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 144 DFSVMSYNILSQELLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 203

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++   ++              AI  +     +L  +      +D   
Sbjct: 204 YGTEIRPSLESLGYHCEYKMKT-----GRKPDGCAICFKHSKFSLLSVNPVEFCRRDIPL 258

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      S C  ++          +   Q   L   I+  
Sbjct: 259 LDRDNIGLVLLLQPK-----IPRAASPSICIANTHLLYNPRRGDIKLTQLAMLLAEISNV 313

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 314 AHQKDGSFCPIVMCGDFNSVPGSPLY 339


>gi|303238818|ref|ZP_07325350.1| Endonuclease/exonuclease/phosphatase [Acetivibrio cellulolyticus
           CD2]
 gi|302593697|gb|EFL63413.1| Endonuclease/exonuclease/phosphatase [Acetivibrio cellulolyticus
           CD2]
          Length = 616

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 83/283 (29%), Gaps = 67/283 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++ +++V +N+  L+                 +Y    +Y    D DIV L E+ + + +
Sbjct: 112 SRDLKIVHFNV--LTSNG--------------EYKNAIEYIDKKDPDIVVLNEV-NKSWI 154

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            K+     +       R  N             IA+  K      +           +  
Sbjct: 155 DKLKLFEKYKYSVVETRDDN-----------FGIALYSKIELQNARIEYFGDDGLPSA-- 201

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                      +   ++ +L            L  +   S +  ++Q + L   I  +  
Sbjct: 202 ------VAEFNVGDNEVSILGT--------HPLTPSDKISFNSRNKQFESL---IENRNS 244

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-NANKNLRNKIPIDY 259
                V+ GD N      G     +K +    +L    +    +           +P+D+
Sbjct: 245 FSKSMVLFGDLNTTSWSYG-----FKNLVKGMNLYDSRQGHGIQFSWPTTIPILSVPLDH 299

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++ ++      +   +                SDH P+ ++ 
Sbjct: 300 CLVSKDIKVLKREMGPNL--------------GSDHRPLYVEL 328


>gi|213622093|ref|ZP_03374876.1| hypothetical protein SentesTyp_33046 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 110

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 31/122 (25%), Gaps = 18/122 (14%)

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            S    Q   L  W+        P ++AGDFN      G        ++       F + 
Sbjct: 5   ESHRQAQLTMLAGWVNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRA 57

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + +D   +                           + LSDH P+S 
Sbjct: 58  HGRPARTFPVSMPLLRLDRIYVKNANASS-----------PGALPLRNWRHLSDHAPLSA 106

Query: 301 DY 302
           + 
Sbjct: 107 EI 108


>gi|157371297|ref|YP_001479286.1| endonuclease/exonuclease/phosphatase [Serratia proteamaculans 568]
 gi|157323061|gb|ABV42158.1| Endonuclease/exonuclease/phosphatase [Serratia proteamaculans 568]
          Length = 359

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/251 (10%), Positives = 57/251 (22%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L         D++   E  ++           W    S              D  
Sbjct: 112 RQADKLLALVAAERPDVLVAVETDAW-----------WEQQLSALEQDYPHSLKCPLDNL 160

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + V  +      Q   L+  +                   G +I +  +H       +
Sbjct: 161 YGMHVYSRLKLSDAQIQYLVDEQIPSMHMMVHLPQ-------GPQIRLHCVHPMPPSPTE 213

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + E+    +          L        +S +P ++ GD N               +  +
Sbjct: 214 NEESEDRDA---------ELVMVGKSAAKSELPVIVTGDLNDVAWSTTTRL----FLKVS 260

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   + P+D+     +              +    ++     
Sbjct: 261 GLLDPRRGRGMFSTFHAGYPFLRWPLDHVFHSDH--------------FVLGSLRRLTSV 306

Query: 292 LSDHCPISIDY 302
            SDH PI ++ 
Sbjct: 307 GSDHFPIMVEL 317


>gi|72387938|ref|XP_844393.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62358601|gb|AAX79061.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70800926|gb|AAZ10834.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 654

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 66/214 (30%), Gaps = 13/214 (6%)

Query: 21  AQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           A   R+V++N+          +++       + +       + + Q     + DI+ LQE
Sbjct: 250 APSFRMVTYNVLHEEFCSTSSAKKTIYPFATDDILSLEYRQSRIVQELLAYNGDIICLQE 309

Query: 74  MGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-- 128
            G        ++V  +  +   Y+ +                     K    +   +   
Sbjct: 310 CGKKVYQQFFSRVMTQYGYEGCYTNKNGGVREGCACFWRRSRFFLQEKDEFPLNWSTMEK 369

Query: 129 -PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                A +       + A+E +  I    +   +   +     ++    ++ +C +   Q
Sbjct: 370 EHPALAAEVTRHPELKEALENVTSIGALVLLKDNATNEELVVGNTHLFYHANACHIRLLQ 429

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
              L   +  + +S    V+ GDFN      G  
Sbjct: 430 VYMLLHKLKSRSDSRRGVVLCGDFNFTHTTGGYK 463



 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 2/91 (2%)

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
           +Y    D F   ++            D      N  +  +  IDY   + +    +    
Sbjct: 563 DYRPPFDVFRADMEAPMQFTDAYGVTDPEMPWTNYTMTFREVIDYVFFNPDRLLVVQTIP 622

Query: 275 FS-EILYNEDDIKSRGKRLSDHCPISIDYDF 304
              E   +E+      K  SDH  +  D  +
Sbjct: 623 IPPESELSENVALPNRKYPSDHVALIADLSY 653


>gi|126304906|ref|XP_001374486.1| PREDICTED: similar to MGC115457 protein [Monodelphis domestica]
          Length = 652

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/300 (10%), Positives = 84/300 (28%), Gaps = 72/300 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +      Y    +  +    S     +++ +    +   
Sbjct: 354 NLDFLCLQEVFDKRAAEKLKDQLHQYFEYILYDVGIYGCCCSCPCKILNSGLLFASRYPI 413

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +    +     + + + + ++ A+ + V++                   +         +
Sbjct: 414 MDAVYHCYPNGEGTDAFS-SKGALFVKVQVGSTP----QDQRIVGYISCTHLQAEGDDST 468

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNN--------- 221
           +  +Q   L+DW+   ++S                V+ GDFN   +   +          
Sbjct: 469 IRCEQLSQLQDWLADFRKSTSSSSTANPEELVAFDVVCGDFNFDNSSPDDKLAQQHSLFT 528

Query: 222 -----------------------------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                                              D+  K ++  +    +  +  S+ +
Sbjct: 529 HYKDPCRVGPGEDKPWAIGTFLNQKRLYDEEVCTPDNLQKVLESEEGRKEYISQPTSKNH 588

Query: 247 ANKN----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +        N   IDY +  +       +    E  +           L+DH P+++  
Sbjct: 589 PSNQKVLMKGNGSRIDYMLYTEEGLYLDWKVEVEEFSFITQLA-----GLTDHLPVAMRL 643


>gi|312602232|ref|YP_004022077.1| ATP-dependent DNA ligase [Burkholderia rhizoxinica HKI 454]
 gi|312169546|emb|CBW76558.1| ATP-dependent DNA ligase (EC 6.5.1.1) [Burkholderia rhizoxinica HKI
           454]
          Length = 1123

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/298 (9%), Positives = 72/298 (24%), Gaps = 69/298 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + +  +NIN L                 +    L ++ ++   D+V LQE+ + +    
Sbjct: 8   PLEIAIFNINGL----------------RARLGQLLEWLEHEGPDVVCLQELKTPDE--- 48

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                      S      +          + + +  +  +       L G +        
Sbjct: 49  -------RFPASDLERAGYGALWRGQAAWSGVTILARGEQPRAVRRALPGFETDTHNRY- 100

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  +E++   + +  ++L +       +  Y  +          L +         
Sbjct: 101 -------LEVSVAGLLIASLYLPNDNPQPGPKFDYKLA------WFDKLIEHAATMVNDS 147

Query: 203 VPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNA 247
            P V+AG++N  +                        +  +               + N 
Sbjct: 148 RPVVLAGNYNVVLTDEDIYNPRSWLKDALLQPQSRQRYAQLLAQGWTDARRVLHPDKRNY 207

Query: 248 NKNLRNKI--------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +          I++ ++++     L                +       H P
Sbjct: 208 TFWDDFRQHWQTHSGLRIEHLLLNRALAPALTAAEVDIWGAASHKRATM------HRP 259


>gi|163741731|ref|ZP_02149121.1| possible endonuclease/exonuclease/phosphatase family protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161384904|gb|EDQ09283.1| possible endonuclease/exonuclease/phosphatase family protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 400

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 98/348 (28%), Gaps = 75/348 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + S+N+  L   +       S   +        +      LDADIV  QE+     +
Sbjct: 3   EFTMASFNVKNLIGPDQEYYKFQSYTPEEYAWKADWMADQLLTLDADIVGFQEIFEEAPL 62

Query: 81  AKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHT----------------------- 112
            ++  +       +      +R   + ++     +                         
Sbjct: 63  REIIAETDRRGHEANAASLPDRSKRYHRKAIFRKLAYTPYTEAKLAFAPNINDSETPGKR 122

Query: 113 --AIAVRKKN----VRVLQQSYPLL------------GAKDSFSRAGNRRAVELLVEING 154
              +A+  +        + Q  P               A     R  +R  +   + + G
Sbjct: 123 RPGLAILSRYGFAEPVEIIQDLPQPLDIPMACLGGEEDAGYYTLRRLSRPIMRARIPVAG 182

Query: 155 KKIWVLDIHLKSF--------------------CFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +   V + HLKS                                 +      +A  L+  
Sbjct: 183 QIFSVFNCHLKSKLGEFITPQGAPYPPETVLTAYDAGGRALGALRAALRRMAEAWVLRRM 242

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN- 253
           I  + E   P ++ GDFN   N + +     +T   N S +     + S    +      
Sbjct: 243 ILDELEQNRPVMVLGDFNDGENAVSSEIISGETPFRNYSWMLRHGARHSGDRYSAEEDRH 302

Query: 254 -KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----RLSDHC 296
            +  ID F +  +A K  +++S  +++Y               +S H 
Sbjct: 303 IRETIDKFRLR-SAEKKFLKKSLRDVVYTTAFGGVHESIDQIYMSRHF 349


>gi|308049275|ref|YP_003912841.1| endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM
           9799]
 gi|307631465|gb|ADN75767.1| Endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM
           9799]
          Length = 293

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 82/290 (28%), Gaps = 54/290 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A     +RL++WNI            +    +   ++  L     +    ++ LQE 
Sbjct: 35  ASLALPEDDLRLLNWNI----------YKQLDNPQWQHEFGGL---INDYRPQLITLQET 81

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              + +  + P  +   +     L+ + +  S       IA   +   +     P+    
Sbjct: 82  NLPSVL--LPPLTSEHGYVFAPNLVLNKRTLSGVMTAATIAPSDQLSLLSDVKEPISNTP 139

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E  +  +G+ + V +IH  +F                 + Q   L+  
Sbjct: 140 KVA------LITEYQLAPSGQVLLVANIHAINFVSNQD-----------FATQVSALERR 182

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + + +    P +++GDFN                           + +            
Sbjct: 183 LAKHQG---PMILSGDFNTW--SPARLKLLAAATSRLGLQPVSFSQDERTRF------FG 231

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            P+D+     +    ++  S                  SDH P+ + + +
Sbjct: 232 SPLDHIFHSTDLA--VVPGSAKVF---------DDTDSSDHQPMMVGFRY 270


>gi|225867840|ref|YP_002743788.1| hypothetical protein SZO_02270 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701116|emb|CAW97970.1| hypothetical protein SZO_02270 [Streptococcus equi subsp.
           zooepidemicus]
          Length = 261

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 83/291 (28%), Gaps = 52/291 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ + +WNIN                       ++    + L+ADI+ L E         
Sbjct: 12  QLTVSTWNIN------------QRSGLGRQIPDMVVTELRQLNADIICLTEY-------- 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                +  +F +  + I +   + +  +     +       L          +  S    
Sbjct: 52  -VKTESHNLFCARLQDIGYEVFEDDRSLEFGNEILVAIKSSLISDSKFTTIDNDDSNP-- 108

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + + V I GK++ ++   +K+                    Q   L   I+    S 
Sbjct: 109 -NFLRVTVNIFGKELNIVGTRIKTGG------KDIIEDFKERKIQLDNL---ISNLPASH 158

Query: 203 VPFVIAGDFN----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
              +I GDFN                      +  +    S         S  N+ K  +
Sbjct: 159 ENTIILGDFNNGFFKQNDDIHSYQGKAREFYSYPLLKSIMSKAGLTVYTPSDLNSWKYCK 218

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +D+   +      ++ E++S       D KS+     DH  +S    
Sbjct: 219 ----LDHIFAN----IPIVNENYSWEFLKNPDYKSQVGYP-DHAILSATIS 260


>gi|152149539|pdb|2V0S|A Chain A, Crystal Structure Of A Hairpin Exchange Variant (Lr1) Of
           The Targeting Line-1 Retrotransposon Endonuclease
          Length = 236

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/289 (10%), Positives = 72/289 (24%), Gaps = 71/289 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRN 253
             +I GDFN  ++ L  +          +    +   D +  +      S          
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFSTANG 198

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 ESKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 235


>gi|301060197|ref|ZP_07201064.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
 gi|300445709|gb|EFK09607.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
          Length = 250

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 71/292 (24%), Gaps = 57/292 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++WN                            +    L+ADI+ +QE  + +     
Sbjct: 1   MKIITWN-------------------CAGALRKKAKELDVLNADILVIQECENPS--EST 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +       +            I     +            +   ++     
Sbjct: 40  IEYQKWAGDFLWIGKNKNKGLGIFPKKENKIKQLDWHGEFEINGLKTKSSSTHWTTEELE 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +      + V           D   +        L   A+ L         S  
Sbjct: 100 LFLPFSINSTYTALGVWT-----KGSDDQAFSYIGQFWKYLQIHARDL---------SYP 145

Query: 204 PFVIAGDFNRKINYLGNNDDF--------WKTIDPNDSLIRFP-----KEKDSRCNANKN 250
             +I GDFN    +   +  +         + I    +          +E        KN
Sbjct: 146 NTIIIGDFNSNTIWDKKDRWWSHSDIMQELREIKIESAYHYQTNESQGRETTPTFFHRKN 205

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           L     IDY ++  N                         ++SDH P+S++ 
Sbjct: 206 LNKAYHIDYALLSSNILPQSK---------VIIGKADDWLKISDHVPLSVEI 248


>gi|255546605|ref|XP_002514362.1| conserved hypothetical protein [Ricinus communis]
 gi|223546818|gb|EEF48316.1| conserved hypothetical protein [Ricinus communis]
          Length = 809

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 62/224 (27%), Gaps = 18/224 (8%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIVFLQE 73
             ++   ++S+NI  + L+      L+ +  +           +    +   ADI+  QE
Sbjct: 128 PNSENFIVLSYNILADYLAINHWRKLYFHIPRHMLDWEWRMRSILFELRLWSADIMCFQE 187

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +  +  +A       +   +                   AI  R    ++L +       
Sbjct: 188 VDRFQDLADQLKPRGYSGIWKMRTGNAVDG--------CAIFWRTSRFKLLHEESIEFNK 239

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN----TYSPSCSLLSQQAQ 189
                       +E L+  N            +      + N           +   Q +
Sbjct: 240 LGLRDNVAQICVLEQLMSNNCTSNTSALPTSSAGSDKVIMCNIHVLYNPKRGEIKLGQVR 299

Query: 190 WLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            L D      +    P V+ GDFN        N    + +D + 
Sbjct: 300 MLLDRAYAVSKMWNAPIVLCGDFNCTPKSPLYNFISEQKLDLSG 343


>gi|114569380|ref|YP_756060.1| endonuclease/exonuclease/phosphatase [Maricaulis maris MCS10]
 gi|114339842|gb|ABI65122.1| Endonuclease/exonuclease/phosphatase [Maricaulis maris MCS10]
          Length = 356

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/321 (10%), Positives = 85/321 (26%), Gaps = 53/321 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +V   + L +WNI                 R    Y  + +       D+V +QE+    
Sbjct: 36  TVDDTLLLATWNIREFDSPAYG-------LRGVEPYHYIAEIISRF--DLVAIQEV--RR 84

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +         +    + + +     N    A     + VR    +  ++       
Sbjct: 85  DTEPLEKLRRLLGRWWKYLVTDVTGGSEGNKERMAFLYDSRKVRFGGLAGEVVIPPIET- 143

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCF----LDSLENTYSPSCSLLSQQAQWLKDW 194
           R  NR+ V    +   +  +++      F F    +  +             + + +  +
Sbjct: 144 RDENRKLVYTPSKQLARTPYLVGFETGWFKFMLSTVHIVYGESKADDPKREAEIRAIARF 203

Query: 195 ITQKKESL----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR------ 244
           +  + +         ++ GDFN         D  +K +     +I    ++ +       
Sbjct: 204 MAARAKEDHAWAENLILLGDFNIF----DPGDVTFKALTEAGFVIPEGLQQVTNVGKEER 259

Query: 245 -CNANKNLRNKIPIDYFVMDQNAY--------------------KFLIQESFSEILYNED 283
             +    +   +  D  +                           +    S         
Sbjct: 260 FFDQMAFMTPNLRKDQILASGAFNFYDHVYRPEDEATYISDMGDAYGTTSSGKPRGNKSL 319

Query: 284 DIKSRGK--RLSDHCPISIDY 302
             K+  +  ++SDH P+    
Sbjct: 320 YYKTYWRTHQMSDHLPLWAAL 340


>gi|300776438|ref|ZP_07086296.1| exodeoxyribonuclease III [Chryseobacterium gleum ATCC 35910]
 gi|300501948|gb|EFK33088.1| exodeoxyribonuclease III [Chryseobacterium gleum ATCC 35910]
          Length = 254

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 87/307 (28%), Gaps = 81/307 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +RL+++N+N +                         + K  D DI+ +QE   G+     
Sbjct: 1   MRLITYNVNGIRAAFTKDFLG---------------WLKTADPDIICIQESKAGNDQIDI 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   K  +  ++ +     +S     + I                ++   G         
Sbjct: 46  ESLEKLGYHSYWHSAVRKGYSGVGIASKIKP--------------NHVEFGCGIESYDNE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      +  +      + +++ S   ++ L+         L        ++I   K+ 
Sbjct: 92  GRI-----IRADFDGYSAISVYVPSASNIERLDFKMQFCYDFL--------EYIKNLKKE 138

Query: 202 LVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRC 245
           +   +I+GDFN     +  ++                     I+  + +  F    +   
Sbjct: 139 IPNLIISGDFNICHEAIDIHNPVGLKNVSGFLPMEREWMTNFINECELIDSFRFFNNEP- 197

Query: 246 NANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           +       +           +DY     +    L +    +   +           SDHC
Sbjct: 198 DNYTWWSYRQNSRERNKGWRLDYNFTSYSLKDKLSRAVILKEAVH-----------SDHC 246

Query: 297 PISIDYD 303
           P  ++ D
Sbjct: 247 PALVELD 253


>gi|158314431|ref|YP_001506939.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
 gi|158109836|gb|ABW12033.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
          Length = 282

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 81/289 (28%), Gaps = 55/289 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++RLV++N    +             R       L    +  +ADIV L E+G       
Sbjct: 22  QLRLVTFNAQHAAPD-----------RARRQAAWLS---RQPNADIVVLTEVGYGPGGHA 67

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +        +             S     TAIA R     V                   
Sbjct: 68  LLDALAHHGYAHLHAPRPDLPDYS-----TAIASRAPLEPVETH-----------IDVLP 111

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            RA    + I G+++ +L +++ S             +    + Q    K          
Sbjct: 112 HRAPAADLHIGGQRVRLLGLYVPSRGP------AERRNEKKRAFQHVVTKALPGFLAGFE 165

Query: 203 VPFVIAGDFN-RKINYLGNND-------DFWKTIDPNDSLIRFPKEKDSRCNANKN--LR 252
            P V+AGD N  +  ++ +         DF+++         +          +      
Sbjct: 166 GPVVVAGDLNVVEPGHVPHYSVFGQWEYDFYRSFTAAGLTDAYRALHPDAPGHSWYGRGG 225

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           N    D+  +  +            +   +     R + LSDH  + + 
Sbjct: 226 NGYRFDHTFLTADRLD---------LTSCDYLHAPRQQGLSDHAALCLT 265


>gi|294791387|ref|ZP_06756544.1| endonuclease/exonuclease/phosphatase family protein [Scardovia
           inopinata F0304]
 gi|294457858|gb|EFG26212.1| endonuclease/exonuclease/phosphatase family protein [Scardovia
           inopinata F0304]
          Length = 376

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/283 (9%), Positives = 73/283 (25%), Gaps = 53/283 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q + +++ N                     +D + +    K    D++ +QE+ S     
Sbjct: 140 QTITVMTINARY----------------GRADTSSILHQVKLHKVDVLCVQEVTS----- 178

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +                   S ++     A+  +   +      +  A        
Sbjct: 179 RFVDRLDREGISQELPFRQLGNYSSKDNGGF-NAIWTRIQPIEAHPQSISIASSQIPT-- 235

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 + + +NG+++     H KS     +  ++   S S  S+    + +   +    
Sbjct: 236 ------VTLSVNGQRVLFASTHPKSPGRGGASWSSSISSLSAFSK----INNADLKNSSQ 285

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--IDY 259
           +   V+ GD N  +++          +  +   +    +  +               ID+
Sbjct: 286 VTANVVMGDLNSNLHHAVLRSVLSSGLTDSSYAL---HKGMNLTFPASWPFFPALIEIDH 342

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +                       I        DH  +    
Sbjct: 343 VLYTGQ---------IQATSLTTQTIPHT-----DHKALIATL 371


>gi|254390373|ref|ZP_05005590.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|197704077|gb|EDY49889.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
          Length = 339

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 84/293 (28%), Gaps = 73/293 (24%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-- 73
            +  V  ++ +++ N+   +                     L    +    D+VF+QE  
Sbjct: 110 PSGPVIARLSVLTSNVEYGNAAP-----------------ALVATVRREQPDLVFVQECP 152

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +    A+A+  P+  +             +           A+  K+        P   A
Sbjct: 153 ITCSRALAEEIPRAEY-----------PYRHVVEGYGADGAAILSKHPLRKTAGVPGSLA 201

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                          + EI G+++ +  +       +  + + +      +   A  +  
Sbjct: 202 MPG-----------AVAEIAGREVRLQLV--HPLPPIPGMVDDWHRELGHIRAYAAGV-- 246

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                     P ++AGDFN   ++ G    F + +D             SR  +      
Sbjct: 247 -------KDAPAIVAGDFNATQDHAG----FRRVLDAGGLRDSAALGGASRTPSWPTAVF 295

Query: 254 K---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +     ID+ ++ ++         F E+               DH  + +  +
Sbjct: 296 RPLGAQIDHVLIGRDLSVR--GARFLELPDT------------DHRALLVGLE 334


>gi|268569472|ref|XP_002640531.1| C. briggsae CBR-EXO-3 protein [Caenorhabditis briggsae]
 gi|187024770|emb|CAP36093.1| CBR-EXO-3 protein [Caenorhabditis briggsae AF16]
          Length = 290

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/304 (10%), Positives = 69/304 (22%), Gaps = 74/304 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + V WN+  L      S +                       DIVFL E        ++ 
Sbjct: 37  KFVCWNVAGLRACVKKSDFSE---------------ILKEQPDIVFLGETKCKEWPNEIE 81

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            K         +           N  +  + +  K   +           D+  R     
Sbjct: 82  EK-------FKDYSKTLVISTEKNGGYAGVGMLSKVAPLKIHKGIGDPEFDTAGRL---- 130

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                +     + + +  ++ +             +     +    L + +        P
Sbjct: 131 -----IIAEFVEFFFVGSYVPN-------SGAKLVNLEKRGRWEALLTEKLKSM-TMTKP 177

Query: 205 FVIAGDFNR-----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA----------NK 249
            +  GD N       +    +N +        +        +    +             
Sbjct: 178 VIYGGDLNVAHEEIDLKNPESNRNKTAGFTDQERGWFTEMLEMGFTDTFRKMHPEEKKYT 237

Query: 250 NLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                           +DY+V+     + + +                  + SDH PI +
Sbjct: 238 FWSYLANAREKDVGWRLDYYVVSDRIMEKVKKSEIM-----------SDVKGSDHAPIVL 286

Query: 301 DYDF 304
             +F
Sbjct: 287 HIEF 290


>gi|323310264|gb|EGA63454.1| Ccr4p [Saccharomyces cerevisiae FostersO]
          Length = 647

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/195 (10%), Positives = 54/195 (27%), Gaps = 11/195 (5%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +   ++S+N      +  +      +           L++   + D+D++ LQE+ S 
Sbjct: 449 AKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESK 508

Query: 78  NAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                  P      +    ++  R      +DS       I  ++   +++ +       
Sbjct: 509 TFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSG 568

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-----DSLENTYSPSCSLLSQQA 188
                +   R    L   +N   + +                 +  +       + + Q 
Sbjct: 569 AWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQV 628

Query: 189 QWLKDWITQKKESLV 203
             L D +    +   
Sbjct: 629 GVLLDHLETLLKEET 643


>gi|304394838|ref|ZP_07376724.1| endonuclease/exonuclease/phosphatase family protein [Ahrensia sp.
           R2A130]
 gi|303293029|gb|EFL87443.1| endonuclease/exonuclease/phosphatase family protein [Ahrensia sp.
           R2A130]
          Length = 276

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 91/287 (31%), Gaps = 30/287 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR   WN+   +  +       + ++  +    L      LDAD V L E+   + +  +
Sbjct: 9   VRFAVWNLAGNTPLDPGRGIGEASEKAENQAKGLA----LLDADFVTLVEVSPISHITWL 64

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +                K+  ++ +H     +        +  P    +      G R
Sbjct: 65  ASRMK----DYGITYNVTIKQQPDSHLHIGYLHKPGIDVSNARFLPDSQGE----YRGGR 116

Query: 144 RAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +A  + VEI  K    V+ +HLKS           +    +   Q + + DWIT  +   
Sbjct: 117 QAFAVDVEIGKKFDATVIGVHLKSGRP--------AKQQQMRDTQCKVIGDWITNLQGED 168

Query: 203 ----VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                   + GDFN       +N  F+     +        +   R +          +D
Sbjct: 169 GYRRDMIALMGDFNMIPGQDVSN--FYHLGGDDVMDFVSCWDLQDRFSHILKKGRANLLD 226

Query: 259 YFVMDQNAYKFLIQESFSEILYN---EDDIKSRGKRLSDHCPISIDY 302
            F + +      ++ S      +   +   +    ++SDH P    +
Sbjct: 227 GFAVSRKFSNDYVRGSLRLFPMHWTLDMGREKFRDKVSDHLPFVASF 273


>gi|222149352|ref|YP_002550309.1| hypothetical protein Avi_3207 [Agrobacterium vitis S4]
 gi|221736336|gb|ACM37299.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 313

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 73/299 (24%), Gaps = 73/299 (24%)

Query: 9   LVFFLVPCTA----SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           +++  +P T     +  Q  R+VS+N+   + + G                 +  Y    
Sbjct: 78  MIWATLPPTPRIDLAHMQPFRVVSFNVLGDNLENGS---------------AITDYILES 122

Query: 65  DADIVFLQEMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            AD+ ++ E    +  + ++     + I                      + +  K    
Sbjct: 123 GADVAYVMEAAPVSLHLDRLAKTYPYRIGCGEHTPT------------CDLMILSKYPLD 170

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           +     L   +        R A+   + + G  + +   HL    F              
Sbjct: 171 MVYVGNLSDLRRD------RFAM-AKIHVGGTALHLAAAHLSKPYFDG------------ 211

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                + L +          P ++AGDFN                             + 
Sbjct: 212 --YHMEELGELGDVLSGIDGPLLLAGDFNASTLAPDMQKLL-------KVTGMNTTGLEP 262

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      +PID+  +        +                     S+H  +  D 
Sbjct: 263 ATWPIIGGAFGVPIDHIYIRSPLMAAKLSRI-------------PSNFGSNHYGLITDL 308


>gi|56758758|gb|AAW27519.1| SJCHGC06222 protein [Schistosoma japonicum]
          Length = 213

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 62/200 (31%), Gaps = 12/200 (6%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +K +++++N            + +S  R       +     N D D++ LQE+   +   
Sbjct: 4   EKFKVLTFN-------CWAVFFPSSTVRKEDRVNAIASKLANGDFDVILLQEIWLESDYR 56

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+         YS     N             I     +         L+   D +   G
Sbjct: 57  KLRLLLDDKYPYSNYFYCNLIGTGMCIFSKWIIECVFTHPFTTNGYPHLIHQADYYCGKG 116

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +  +    G +I     HL +   LD + + Y+        Q   + +++      
Sbjct: 117 --IGLARITSKEGFRINFYVTHLIARYELDRMLDKYNG---HRISQLVEVMEFVRMTSTG 171

Query: 202 LVPFVIAGDFNRKINYLGNN 221
               +I GDFN + N     
Sbjct: 172 SDAIIITGDFNLESNTSAIE 191


>gi|333027558|ref|ZP_08455622.1| hypothetical protein STTU_5062 [Streptomyces sp. Tu6071]
 gi|332747410|gb|EGJ77851.1| hypothetical protein STTU_5062 [Streptomyces sp. Tu6071]
          Length = 349

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 85/316 (26%), Gaps = 85/316 (26%)

Query: 3   RKYVLALVFFLVPCTA-------------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           R+   AL+  ++P                     + +V+ N+N  +              
Sbjct: 97  RRSATALLALVLPVAVWLNLFGGLVLGHDQSRGDLTVVTHNVNAENG------------- 143

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
              D     +      A ++ L+E+                 ++ T+  +          
Sbjct: 144 ---DLPGTVRTLVGSGAQLLALEELTEQAVPEYASALKATYPYHVTKGTVG--------- 191

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FC 168
                         L   YPL G K      G  RA+    E     + V   HL S   
Sbjct: 192 --------------LWSKYPLRGTKPVDLELGWERALRTTAETPRGPVAVFVAHLPSVRV 237

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
            LD+         S     A+ L   I ++  +    V+ GD N  +N         + +
Sbjct: 238 KLDTGFVAGQRDRS-----AEALGKAIREEPLTNK--VLVGDLNGTMND--------RAL 282

Query: 229 DPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            P  S +R  +    +              ID  ++           S   +        
Sbjct: 283 SPVTSQLRSTQGAAGKGFGFSWPAGFPMARIDQILVGGA-----EPVSSWTLP------- 330

Query: 287 SRGKRLSDHCPISIDY 302
              +  SDH P++   
Sbjct: 331 ---RTGSDHLPVAASI 343


>gi|322489986|emb|CBZ25246.1| AP-endonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 447

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 85/335 (25%), Gaps = 88/335 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----MGSYNAV 80
           + ++WN+  L                  + + LR + +    DI+ LQE    +    A 
Sbjct: 131 KFITWNVAGLRGL------------LKKNASALRAFMEAEQPDILCLQETKLNVDEAEAN 178

Query: 81  AKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           A +   + +            +S   +     T +   K+      + + L     + + 
Sbjct: 179 AALGVVDGYSFVDHPCAFKRGYSGTRTYMKNSTTV---KRLHARCTRGFALPSEPQADAA 235

Query: 140 AGNRRAVELLVEINGKKIWVL------------------DIHLKSFCFLDSLENTYSPSC 181
           AG+   VE   +  G+ +                          S   L  L        
Sbjct: 236 AGSPVLVEGAGDEEGRVLTTFLSPDPGSGSSSSRIALVNTYVANSGMGLTRLPYRIQSFD 295

Query: 182 SLLSQQAQWLKDWITQKK-----------ESLVPFVIAGDFNRKINYLGNNDD------- 223
             + +    L  W T+              S   F+ AGD N                  
Sbjct: 296 PNMREYLHRLDTWATENAAVPSAAATGGDSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQ 355

Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                       F +T+   +S+  F +              +           +DYFV+
Sbjct: 356 ECSGFAPEERMSFRETMQRTNSVDVFRQLYPQAGPVYSFWSQRINGRPRNLGWRLDYFVV 415

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            Y  D         SDHCP
Sbjct: 416 SSRLAS-----------YVVDCFPMPTVMGSDHCP 439


>gi|302518667|ref|ZP_07271009.1| StaP [Streptomyces sp. SPB78]
 gi|302427562|gb|EFK99377.1| StaP [Streptomyces sp. SPB78]
          Length = 349

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 47/316 (14%), Positives = 85/316 (26%), Gaps = 85/316 (26%)

Query: 3   RKYVLALVFFLVPCTA-------------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           R+   AL+  ++P                     + +V+ N+N  +              
Sbjct: 97  RRSATALLALVLPVAVWLNLFGGLVLGHDQSRGDLTVVTHNVNAENG------------- 143

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
              D     +      A ++ L+E+                 ++ T+  +          
Sbjct: 144 ---DLPGTVRTLVGSGAQLLALEELTEQAVPEYASALKATYPYHVTKGTVG--------- 191

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FC 168
                         L   YPL G K      G  RA+    E     + V   HL S   
Sbjct: 192 --------------LWSKYPLRGTKPVDLELGWERALRTTAETPRGPVAVFVAHLPSVRV 237

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
            LD+         S     A+ L   I ++  +    V+ GD N  +N         + +
Sbjct: 238 KLDTGFVAGQRDRS-----AEALGKAIREEPLTNK--VLVGDLNGTMND--------RAL 282

Query: 229 DPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            P  S +R  +    +              ID  ++           S   +        
Sbjct: 283 SPVTSQLRSTQGAAGKGFGFSWPAGFPMARIDQILVGGA-----EPVSSWTLP------- 330

Query: 287 SRGKRLSDHCPISIDY 302
              +  SDH P++   
Sbjct: 331 ---RTGSDHLPVAASI 343


>gi|226326255|ref|ZP_03801773.1| hypothetical protein PROPEN_00097 [Proteus penneri ATCC 35198]
 gi|225205333|gb|EEG87687.1| hypothetical protein PROPEN_00097 [Proteus penneri ATCC 35198]
          Length = 151

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 37/155 (23%)

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL------------------- 218
             +     +    L++++T   +   P +I GD N                         
Sbjct: 2   KLNFQQKKKFYADLQNYLTASLKPTSPVLIMGDLNISPTDKDIGIGENNMKRWLKTGKCS 61

Query: 219 --GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAY 267
                 ++  T+        F ++     +       +           ID  +  +   
Sbjct: 62  FLPEEREWLATLMGWGLTDTFRQQHPEADDKFSWFDYRSKGFDDNRGLRIDLLLASRCLA 121

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              I           D      ++ SDH P+  ++
Sbjct: 122 DNCISTGI-------DYDIRGMEKPSDHAPVWAEF 149


>gi|36030946|ref|NP_653168.2| protein angel homolog 2 [Homo sapiens]
 gi|114572546|ref|XP_514187.2| PREDICTED: protein angel homolog 2 isoform 2 [Pan troglodytes]
 gi|74746929|sp|Q5VTE6|ANGE2_HUMAN RecName: Full=Protein angel homolog 2
 gi|55665690|emb|CAH71920.1| angel homolog 2 (Drosophila) [Homo sapiens]
 gi|119613772|gb|EAW93366.1| angel homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
 gi|221040606|dbj|BAH11980.1| unnamed protein product [Homo sapiens]
          Length = 544

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 166 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 225

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +       D   
Sbjct: 226 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISL 280

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      + C  ++          +   Q   L   I+  
Sbjct: 281 LDRDNVGLVLLLQPK-----IPYAACPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 335

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 336 AHQKDGSFCPIVMCGDFNSVPGSPLY 361


>gi|167523084|ref|XP_001745879.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775680|gb|EDQ89303.1| predicted protein [Monosiga brevicollis MX1]
          Length = 364

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 94/323 (29%), Gaps = 48/323 (14%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           V+ ++    P  A+      L ++NI    E       K S     +D   +       +
Sbjct: 14  VVLVLTIGGPWLAAGRTTATLAAFNIQVFGET------KASKPDVMADIVSIC-----HN 62

Query: 66  ADIVFLQEMGS--YNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            D V +QE+      A+A +                +    +  +++    A   R    
Sbjct: 63  FDFVAIQEIRDASSEALATLMDALNENQPTALQYINITGPREGTTSSKEQYAFVYRPAR- 121

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL-------------------VEINGKK----IW 158
            +       L   ++F R      VE+L                   +   G        
Sbjct: 122 -IRVHDAFALNMSETFERPPMAAIVEVLTPGSSNRSSTPAALRGEAPLITPGGPSSPRYP 180

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQKKESLVPFVIAGDFNRKIN 216
           V      S      L     PS      +   L     I  +   + P V+AGDFN   +
Sbjct: 181 VTSSLASSAGLFQVLVLHAKPSSDATYLELSALDQARQIATQYAGVEPTVLAGDFNAGCS 240

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF- 275
           YL  + +   TI  +        +     + N         D  V   N    ++Q    
Sbjct: 241 YLPADKEAEVTIFKS-PYTVLINDSADTTSTNSVCPY----DRIVTFGNIGSRILQSGII 295

Query: 276 SEILYNEDDIKSRGKRLSDHCPI 298
           +      +  + R + +SDH PI
Sbjct: 296 NTEAAPFNFDQERAEAVSDHYPI 318


>gi|182434066|ref|YP_001821785.1| hypothetical protein SGR_273 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178462582|dbj|BAG17102.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 346

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 76/298 (25%), Gaps = 51/298 (17%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L   L+   +     + +VS N+   +     +    +                    
Sbjct: 100 LHLFGGLLADKSRQGGDLTVVSHNVGADNPDAVGTARALAAAGA---------------- 143

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++ L+E+           + T+    +T    +                  + V V   
Sbjct: 144 DVLALEELDP-------ADRRTYERELATAYPHHTVLGTVGVWSRLP-LSDTRPVDVAMD 195

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           + PL  AK +  +    R +   V  +   + V   HL S             S      
Sbjct: 196 AGPLGDAKPAEVKLAYNRGLRTTVATDHGPLAVYVAHLGSVRVNP----RAGLSSGQRDA 251

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            A+ L   +    E     V+ GD N  ++         +     +              
Sbjct: 252 GARSLGRAVA--AERNERVVLLGDLNGTLDDRAYAGITSRMRSAQEVAGDGFGFSWPATF 309

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     ID  ++       +  ES   +              SDH P++    +
Sbjct: 310 P------VARIDQILVRG-----VEPESSWLLPAT----------GSDHLPVAARVSW 346


>gi|291240985|ref|XP_002740396.1| PREDICTED: Transposon TX1 uncharacterized 149 kDa protein-like
           [Saccoglossus kowalevskii]
          Length = 1297

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 86/292 (29%), Gaps = 70/292 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK-NLDADIVFLQEMGSYNAVAK 82
           + + +WN+N                R +     +  Y K N +AD+ FLQE  S +A   
Sbjct: 4   ISVATWNVNGC--------------RDSLKRHSVFNYLKLNQNADLCFLQETHSLHA--- 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +  W I +      +H    S      AI V       +  S  ++  +        
Sbjct: 47  --DEARWQIVWRAPIAFSHGTTTSAG---VAILVSPNKNITINSSRSIVNGR-------- 93

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + +   +NG +  +L+++  +                  S     LK  I +  +  
Sbjct: 94  --LLHVNATVNGSRYHLLNVYAPTNGV-------------ERSAFFNTLKKTINE-LDKN 137

Query: 203 VPFVIAGDFNRKINYLGNND----------DFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
              ++ GDFN  +N   + +             + I      I   +       A    R
Sbjct: 138 DCIIVGGDFNCTLNPSLDRNRTFEPNAPSTQVLQNIVNRFKFIDAWRRFHGNTRAFTWSR 197

Query: 253 NKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +D F +       +I                    LSDH PI +  
Sbjct: 198 GDSYSRLDRFYITNTLASKIISVLI-----------DSASTLSDHKPIKLVI 238


>gi|262375030|ref|ZP_06068264.1| endonuclease/Exonuclease/phosphatase [Acinetobacter lwoffii SH145]
 gi|262310043|gb|EEY91172.1| endonuclease/Exonuclease/phosphatase [Acinetobacter lwoffii SH145]
          Length = 376

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 64/253 (25%), Gaps = 45/253 (17%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           T + Y LL +  +    D+V   E               W    S        +     D
Sbjct: 113 TNTKYHLLIEQIQIHQPDLVLTLETDQN-----------WQNALSVIEADYPYRVPVPLD 161

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               + +  K      +   +L  +              ++  +G+ + +  +H K    
Sbjct: 162 NLYGMHLYSKLELRETEVKFILSDEIPSIHT-------TVILRSGQPVQLYCLHPKPPSP 214

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            ++ ++T   +          L     Q K+     ++ GD N            ++ I 
Sbjct: 215 TEAKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS 263

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               L                   +  +D+                    +    ++   
Sbjct: 264 --GLLDPRVGRHYVNTFHADYPFFRWSLDHVFHS--------------TDFALVHMERLP 307

Query: 290 KRLSDHCPISIDY 302
              SDH P+ +  
Sbjct: 308 HVGSDHFPVFLVL 320


>gi|294813852|ref|ZP_06772495.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|326442270|ref|ZP_08217004.1| hypothetical protein SclaA2_14449 [Streptomyces clavuligerus ATCC
           27064]
 gi|294326451|gb|EFG08094.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
          Length = 350

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 84/293 (28%), Gaps = 73/293 (24%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-- 73
            +  V  ++ +++ N+   +                     L    +    D+VF+QE  
Sbjct: 121 PSGPVIARLSVLTSNVEYGNAAP-----------------ALVATVRREQPDLVFVQECP 163

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +    A+A+  P+  +             +           A+  K+        P   A
Sbjct: 164 ITCSRALAEEIPRAEY-----------PYRHVVEGYGADGAAILSKHPLRKTAGVPGSLA 212

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                          + EI G+++ +  +       +  + + +      +   A  +  
Sbjct: 213 MPG-----------AVAEIAGREVRLQLV--HPLPPIPGMVDDWHRELGHIRAYAAGV-- 257

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                     P ++AGDFN   ++ G    F + +D             SR  +      
Sbjct: 258 -------KDAPAIVAGDFNATQDHAG----FRRVLDAGGLRDSAALGGASRTPSWPTAVF 306

Query: 254 K---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +     ID+ ++ ++         F E+               DH  + +  +
Sbjct: 307 RPLGAQIDHVLIGRDLSVR--GARFLELPDT------------DHRALLVGLE 345


>gi|260204091|ref|ZP_05771582.1| hypothetical protein MtubK8_07255 [Mycobacterium tuberculosis K85]
 gi|289573516|ref|ZP_06453743.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289537947|gb|EFD42525.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
          Length = 490

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 80/297 (26%), Gaps = 31/297 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           VF     T +++    ++++NI  L      ++             L   Y  N+  D  
Sbjct: 211 VFVGNTPTDTISGDFSMLTYNIAGLPFPLSSAILPRFFYTKEIGKRLNAYYVANVQEDFA 270

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSY 128
             Q           F      +   T                  +    +  V+ L +  
Sbjct: 271 HHQ-----------FLIKKSKMPSQTPPEPPTLLWPIGVPFSDGLNTLSEFKVQRLDRQT 319

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                 D+          ++ +   G  + V ++H  +     +  N             
Sbjct: 320 WYECTSDNCLTLKGFTYSQMRL-PGGDTVDVYNLHTNTGGGPTTNAN------------L 366

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             + ++I Q   +    ++ GDFN + +   +    +  ++         +   +     
Sbjct: 367 AQVANYIQQN-SAGRAVIVTGDFNARYSDDQSALLQFAQVNGLTDAWVQVEHGPTTPPFA 425

Query: 249 KNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      +D           L   S+           S+G+ LSDH P  + +
Sbjct: 426 PTCMVGNECELLDKIFYRSGQGVTLQAVSYGNEAPK--FFNSKGEPLSDHSPAVVGF 480


>gi|254506437|ref|ZP_05118579.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus 16]
 gi|219550611|gb|EED27594.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus 16]
          Length = 1101

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/397 (10%), Positives = 85/397 (21%), Gaps = 125/397 (31%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKN--------SVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +++ + N+             N        S +        + +    LDADI+ + E+
Sbjct: 556 TIKVATQNVLNYFNSPYGGADNNFGDNRGAESQQEFERQQAKIVEAIYGLDADILGVMEV 615

Query: 75  GSY-----NAVAKVFPKNTWCIFYSTERLINHSKRDS----------------------- 106
            +      +A+ ++        +       N                             
Sbjct: 616 ENNGFGDFSAINELLAAVNAKYYDEDYGDRNRQNSIHNRYVFVGFDKNGDAVLDEQDTVG 675

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKD--------------------SFSRAGNRRAV 146
           ++ I T +  R   V ++      +  +                            R +V
Sbjct: 676 SDAITTGVIYRPSKVSIITGEVIPMPEQHAPTIVDGNGAPILDKKGEIRESGDNYQRHSV 735

Query: 147 ELLVEIN--GKKIWVLDIHLKSFCF-------------------LDSLENTYSPSCSLLS 185
               ++N  GKK+ V   H KS                       D   + +  SC    
Sbjct: 736 VATFKVNHTGKKLSVAVNHFKSKGSTCYEDWKGWETWKNFDPEKDDVRNDDFQGSCENFR 795

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             A +      +        V+ GD N   N                          +  
Sbjct: 796 VAAAYHLGSELEDIAGDK--VVLGDMNSYANEDPMLVLTSNPTGKAIYASEHTYVGKTPF 853

Query: 246 ---------------------------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                                       +         +D+ ++  +    L+  +   I
Sbjct: 854 EKNGQRIEKTFGYLNAVDLKTEEGKTSWSYSFNDEVGSLDHMLISPSLQGRLVDATDWHI 913

Query: 279 LYNEDDIKSRGK-------------------RLSDHC 296
              E  +                        R SDH 
Sbjct: 914 NAPESSLYDYNHKYKGGDTNEPNPFYAETPFRSSDHD 950


>gi|310790455|gb|EFQ25988.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 768

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/367 (11%), Positives = 92/367 (25%), Gaps = 84/367 (22%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            +   +KV++ SWN+  +  +  +                  +    +  DAD++ LQE+
Sbjct: 379 VSPALEKVKVFSWNVLCDKYATPQTYGYTPTGALNWEYRKACIFDELREKDADLLCLQEI 438

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPL 130
            +     +  P+     +         +K  +  D       A   +     +L +    
Sbjct: 439 STEAFKEEFSPELAQMDYKGVHWPKTRAKTMAEKDAQGVDGCATFYKASKWILLDKQVIE 498

Query: 131 L-----------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLEN 175
                          D F+R   +  + ++V     + G +I +++ HL     L  ++ 
Sbjct: 499 FAAIAINRPDMKNQHDVFNRVMPKDNIAVVVFLESRVTGSRIILVNGHLAWESVLADVKL 558

Query: 176 TYSPSCSLLSQQAQWLKDWITQKK-----------------------------------E 200
             +    +L +Q   L +   +                                      
Sbjct: 559 IQTG---ILMEQITKLAEKYVRWPALKDKKPITFSATGKDGEEPPPPAKEPGPSQEYRNN 615

Query: 201 SLVPFVIAGDFNRKINYLGN------------------------NDDFWKTIDPNDSLIR 236
           + +P ++ GDFN   +                             D         D+   
Sbjct: 616 TDIPLLVCGDFNSTEDSSVYELLSMGRVPPNHQELSSFQYGSFTRDGIEHPFSLRDAYAH 675

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                D     N        IDY            I                     +DH
Sbjct: 676 IKNTPDEMPFTNYTPGFSDVIDYLWYSTNTLEVVDILGPPDAEYLKRVPAFPNYHFPADH 735

Query: 296 CPISIDY 302
             I  ++
Sbjct: 736 IQIMAEF 742


>gi|66825425|ref|XP_646067.1| hypothetical protein DDB_G0269560 [Dictyostelium discoideum AX4]
 gi|60474193|gb|EAL72130.1| hypothetical protein DDB_G0269560 [Dictyostelium discoideum AX4]
          Length = 575

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/350 (11%), Positives = 81/350 (23%), Gaps = 89/350 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------- 74
           + ++++S+N    +E                   L+    +    D++  QE+       
Sbjct: 243 ETIKIMSYNTWNFNEP------------WKDRRILMADLIEKELPDVISFQELRFSAWDS 290

Query: 75  -----------GSYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                         N V  +F         Y+   L +     S       +++  K+  
Sbjct: 291 EVKSSNPIKMGEERNQVQHLFKLLGERNLKYNFVYLPSMVYPTSTGLQFEGLSIFSKHEI 350

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
               S  L         A  R  + + +    K+    +I  K   F          S  
Sbjct: 351 SNIDSIKLSRDIKKPDDAHQRSCLRVEINFKKKQQQQFEISKKINIFTSHFSLETDGSKR 410

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------------------ 224
              +   W+  +         P +  GDFN + N                          
Sbjct: 411 NAYESLNWINSF-------KKPHLFMGDFNLEPNENAIQFLLGNYDINNYYKDNNNNNNN 463

Query: 225 ---------------------WKTIDPNDSLIRF-----------PKEKDSRCNANKNLR 252
                                 + +  N+ ++                 +         +
Sbjct: 464 LIDTWVEFSNHPNQKNEKNRQLQFLKDNEGVVSIVGIEDTDRCKETDLVNGFTFPTLYSK 523

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               ID+ +   +    LI               S     SDH  IS  +
Sbjct: 524 PSKRIDFLLRSNDQILSLIDFKIGGRCSKLSPFNSP-FYASDHTSISATF 572


>gi|308178124|ref|YP_003917530.1| extracellular nuclease [Arthrobacter arilaitensis Re117]
 gi|307745587|emb|CBT76559.1| putative extracellular nuclease [Arthrobacter arilaitensis Re117]
          Length = 319

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 65/274 (23%), Gaps = 46/274 (16%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           I   S    +S+   +  +  SD   L +     D  I+ L E           P +   
Sbjct: 90  IQKDSADFDLSVLAFNALKAGSDPEQLAELISVADPQILVLVETSE--------PLHQQL 141

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150
                   + +   ++         +  K     + +         +S         + V
Sbjct: 142 ATRGAFDHLGYRSLEAPAGGERDTVIFSKYPLHERTTELDTKTTGWYSLP------VVDV 195

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
           +  G    V  IH+               +                   +   P V+AGD
Sbjct: 196 KSPGGIFTVAGIHIYPPVGDAQRWRNGLQAVDGW------------TGGQRDHPLVLAGD 243

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
           FN    + G            D +         R          I +D+ +    +    
Sbjct: 244 FNSVRAHPGFRALTNDGFSEADGIWPASTWPADR-----KFNAMIGLDHIMSRGASVTEF 298

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +                  SDH  +S   +F
Sbjct: 299 SVHAVD---------------GSDHLAVSATVEF 317


>gi|271966138|ref|YP_003340334.1| hypothetical protein Sros_4758 [Streptosporangium roseum DSM 43021]
 gi|270509313|gb|ACZ87591.1| hypothetical protein Sros_4758 [Streptosporangium roseum DSM 43021]
          Length = 358

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 70/282 (24%), Gaps = 52/282 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + S N+   +     +                 +      A+++ L+E         
Sbjct: 129 DLTVASHNVGAANPDPAGT----------------ARDLAASGANVLALEE--------- 163

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P+ T        +   +        + + + +       +     L     + ++   
Sbjct: 164 LIPQTTGTYEKELAKTYPYHTVLGTVGLWSKLPLSGTQPIDIMNYGTLAETIPADTKMAP 223

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            RA+   V  +   + V   HL S               +  +   Q L   +    E  
Sbjct: 224 NRALRTTVATDHGPLTVYVAHLGSVRVNP----KAGFWTASRNIGVQALGKAVA--AEKN 277

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              V+ GD N  ++       F        S      +              +  D  ++
Sbjct: 278 KRVVLLGDLNGTMDD----RVFADITSQMHSAQDAAGDGFGFTWPASFP--VVRADEILV 331

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  +  ES   +              SDH P+     +
Sbjct: 332 RG-----VELESSWVLPAT----------GSDHLPVVAGISW 358


>gi|73974662|ref|XP_848463.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1272

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 7   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQMDTYS 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 53  LKMKDWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 102 -------SIQQEDLTILNIYAPNVGT---------------AKYINQLLTKVKKYLDNNT 139

Query: 204 PFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN          K N          T+D  D    +     +           
Sbjct: 140 --LILGDFNLALSILDRSSKHNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 197

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 198 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 237


>gi|27497789|gb|AAO13006.1| conserved hypothetical protein [Pseudomonas fluorescens]
          Length = 240

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 69/255 (27%), Gaps = 44/255 (17%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLD 65
           ++        ++RL+S+NI      E    +     +          +   +    K  D
Sbjct: 22  VMSTGLPGDSRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHTGRAGNLQKIGDLLK--D 79

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRVL 124
            D+V LQE    +  +    +                  R+       +  V  +     
Sbjct: 80  FDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLGQHSNGVLSRLRPWA 139

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            + +PL G K        R A+        + + V+ +HL                    
Sbjct: 140 IEDHPLPGPKG-------RGAILARFGEGPEALVVVMMHLALG-------------ARTR 179

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           + Q  ++++ I   K      V+ GD N               +     L          
Sbjct: 180 TMQLAYIRELIGGYKHQ----VLMGDMNTHATD----------LLQTSPLRDLGLLAPQL 225

Query: 245 CNANKNLRNKIPIDY 259
                + R +  +D+
Sbjct: 226 EATFPSWRPQRCLDH 240


>gi|330466126|ref|YP_004403869.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328809097|gb|AEB43269.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 392

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 79/296 (26%), Gaps = 38/296 (12%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               + A  V++V+WN             + +     +       + +++DAD+  L E 
Sbjct: 107 TPPPAPADAVKVVTWNTEY------WDQDRRNGGEQRTTTEEFYDFLRDMDADVYMLHEY 160

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---------TAIAVRKKNVRVLQ 125
            + +          + I  + E            +              +       +  
Sbjct: 161 ANVDDSLVDIFAQAYEIDQTAELQAAFPGYTVVREGRNMTITRLPVVGHSWLDSTPYLPD 220

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC------FLDSLENTYSP 179
              P+  A          +A+   +++NG+ +   + H+            D   N +  
Sbjct: 221 DLKPVPPALVDRPLFYTSQALRTDIQVNGQVVSFYNTHIFQPPVRILLLRSDDDRNMFEI 280

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                  +    +        +    V+AGD N   +    +    + +D    L     
Sbjct: 281 DRFNFEIRQASYQAVAADLATNPNRAVMAGDLNTSPSMNLLDMVSDRLVDQTKVLSSL-- 338

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     +      ID+     +          +   Y+     +  + LSDH
Sbjct: 339 --YPVTWPVGDKPRMWRIDWLFTTPD---------ITVHSYD----LTMPRGLSDH 379


>gi|322502593|emb|CBZ37676.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 832

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 68/260 (26%), Gaps = 43/260 (16%)

Query: 24  VRLVSWNINTLSEQEG-------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            R+V++NI                    + +    +    + Q       DIV LQE G 
Sbjct: 412 FRVVTYNILYDDFCTSKSSKAKIYPFATDDILDLENRKVRIVQELLAYHTDIVCLQECG- 470

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--- 133
                 VF      +  +      +  +  +         R+   +++Q +   L     
Sbjct: 471 ----RDVFQSYFLPVMRACGYDGVYCNKSGSVKEGCGFLFRESRFQLVQHASVPLNFQTL 526

Query: 134 --------KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                       +      A+  +  I  + +       K     ++    ++ +C +  
Sbjct: 527 STMFPELAGRVGACPELEEALSAVTSIGARVVLRESTSDKEIVVGNTHLFYHANACHIRV 586

Query: 186 QQAQWLKDWITQ--------------------KKESLVPFVIAGDFNRKINYLGNNDDFW 225
            QA  L  W++                     +     P V+ GDFN             
Sbjct: 587 LQAYMLLHWLSDATLISPGGDAATSPSPSLANRARPRRPLVMCGDFNCTHATGAYRLLTT 646

Query: 226 KTIDPNDSLIRFPKEKDSRC 245
             ++ +       +     C
Sbjct: 647 GQVEADHPSWDKGRLFWWGC 666



 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 1/71 (1%)

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEILYNEDDIKSRGKRLS 293
             + +   S    N  L  +  IDY    +++ + L      SE    E+      K  S
Sbjct: 759 DAYHRTDLSLPWTNFTLTFREVIDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPS 818

Query: 294 DHCPISIDYDF 304
           DH  +  D  F
Sbjct: 819 DHVALVADLAF 829


>gi|321398689|emb|CAM71649.2| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 832

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 68/260 (26%), Gaps = 43/260 (16%)

Query: 24  VRLVSWNINTLSEQEG-------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            R+V++NI                    + +    +    + Q       DIV LQE G 
Sbjct: 412 FRVVTYNILYDDFCTSKSSKAKIYPFATDDILDLENRKVRIVQELLAYHTDIVCLQECG- 470

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--- 133
                 VF      +  +      +  +  +         R+   +++Q +   L     
Sbjct: 471 ----RDVFQSYFLPVMRACGYDGVYCNKSGSVKEGCGFLFRESRFQLVQHASVPLNFQTL 526

Query: 134 --------KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                       +      A+  +  I  + +       K     ++    ++ +C +  
Sbjct: 527 STMFPELAGRVGACPELEEALSAVTSIGARVVLRESTSDKEIVVGNTHLFYHANACHIRV 586

Query: 186 QQAQWLKDWITQ--------------------KKESLVPFVIAGDFNRKINYLGNNDDFW 225
            QA  L  W++                     +     P V+ GDFN             
Sbjct: 587 LQAYMLLHWLSDATLISPGGDAATSPSPSLANRARPRRPLVMCGDFNCTHATGAYRLLTT 646

Query: 226 KTIDPNDSLIRFPKEKDSRC 245
             ++ +       +     C
Sbjct: 647 GQVEADHPSWDKGRLFWWGC 666



 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 1/71 (1%)

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEILYNEDDIKSRGKRLS 293
             + +   S    N  L  +  IDY    +++ + L      SE    E+      K  S
Sbjct: 759 DAYHRTDLSLPWTNFTLTFREVIDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPS 818

Query: 294 DHCPISIDYDF 304
           DH  +  D  F
Sbjct: 819 DHVALVADLAF 829


>gi|237712522|ref|ZP_04543003.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229453843|gb|EEO59564.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 343

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/338 (8%), Positives = 68/338 (20%), Gaps = 74/338 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           ++  ++ WNI                      Y  +      L  D V L E+ +Y    
Sbjct: 22  KEFTVLQWNIWQEGTVIPGG------------YNAIVNEIARLRPDFVTLSEVRNYE--- 66

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-----VRVLQQSYPLLGAKDS 136
                  +                S     T +  R        V   +  +  +    +
Sbjct: 67  ----NTNFTARLVQSLKEKGETYYSFYTYDTGLLSRYPITDSLTVFPEKNDHGSIYRLTA 122

Query: 137 FSRAGNRRAVELLVEINGKKIWVL-----DIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                        ++      + +         +        E       S      +  
Sbjct: 123 DMNGQKIAVYTAHLDYLDDAYYNVRGYDGSTWEEIPIPTTVEEVLKRNVASQRDDAIRLF 182

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNND-------------DFWKTIDPNDSLIRFP 238
            +   + + +    ++ GDFN   +     +                  +     L    
Sbjct: 183 IEQAKKDRAAGYTIILGGDFNEPSHQDWTEETKDLYDHHGFVIPWTVPVLLDEAGLKDAY 242

Query: 239 KEKDSRCNANKNLRNKI--------------------PIDYFVMDQNAYKFLIQESF--- 275
           +E                                    IDY          +   +    
Sbjct: 243 REFYPDVLNYPGFTYPSDNPAKPADKITWAPKADERDRIDYIWYYPEKGLKVKDAAIFGP 302

Query: 276 ---------SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     +    +  I+  G   +DH  + + + +
Sbjct: 303 KNSIVRAQRVQETSKDKFIEPLGVWPTDHKGVLVTFQY 340


>gi|326434684|gb|EGD80254.1| hypothetical protein PTSG_10930 [Salpingoeca sp. ATCC 50818]
          Length = 975

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 65/233 (27%), Gaps = 25/233 (10%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R+VS+NI          + +           +T   +  + +       D V LQE+G 
Sbjct: 443 MRVVSYNILHDMFCDGTFALEHLYPYLDPIHAKTNYRHRRIAEEIAGYLPDFVCLQEVGH 502

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 + P+      +         +R            R++   +      L      
Sbjct: 503 AEFHEVLEPRLGAAGLHGVYANKISQQR----WGMATFFRRERWSLLEAHRLNLTRQWRV 558

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-------------SL 183
            S   +  + +  ++   +    +   L   C   S        C              +
Sbjct: 559 HSTIASVASSQPALQDQLENSTTVAQLLLLQCADGSRHYDGQLLCVVNCHLFSHPMAPHV 618

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
              QA  +   I  +  + VP +  GDFN   N         ++I+    +  
Sbjct: 619 RVIQAAVIAAEIKDRFGA-VPVIWCGDFNANPNAAVVQFLHHRSIEETHPVWA 670


>gi|239996509|ref|ZP_04717033.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii ATCC
           27126]
          Length = 327

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 78/286 (27%), Gaps = 62/286 (21%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
             S +QK+ ++S N+   ++                D+  L ++ +N   D +   E   
Sbjct: 97  VESASQKLSVLSSNVYMPND----------------DFRKLIEHVRNKQPDFLVTLE--- 137

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                       W    S        ++    +    + +  K          L+     
Sbjct: 138 --------SNEKWQKGISEIESEYPYRKFCPLENLYGMHLYSKLPFEEVSLRFLIEEDVP 189

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             +        + +  +G+ + +  +H K     ++                  L     
Sbjct: 190 SMK--------VKINHHGQDVTLYFLHPKPPSPTENTYAKPRDV---------ELTVVGE 232

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +  E+  P V+AGD N            +K I     L              K    K P
Sbjct: 233 EIAETEGPIVVAGDLNDVAWSPTTRK--FKKIS--GLLDPREGRGFFNTFHAKYPLVKWP 288

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D+    ++              +   +I+      SDH P+  + 
Sbjct: 289 LDHVFHSEH--------------FALVNIEKLESIGSDHYPLYTEL 320


>gi|322827566|gb|EFZ31686.1| Sphingomyelin phosphodiesterase [Trypanosoma cruzi]
          Length = 596

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 79/293 (26%), Gaps = 65/293 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++ ++S+N+  +   +  +            Y            DI+ LQE  S    
Sbjct: 2   PTEITVLSFNLWGIFNSKYRAARMARFAAKVVHY------------DIILLQEQFSKEDF 49

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-------QSYPLLGA 133
             +          S  R   + KR  +    + IAV  +             Q YP    
Sbjct: 50  ELIISNLP-----SEVREKRYFKRFPSAFYGSGIAVISRFPIKSALFFTFPLQGYPERVL 104

Query: 134 KDSFSRAGNRRAVELLV----------EINGKKIWVLDIHLKSFCFLDSLENTYSPSC-- 181
              +        + + V          +   +++ + + HL +     +    +      
Sbjct: 105 HGDYYANKGASLLRIHVPCTTMRGVSPDPPYEEVLLYNTHLVAAYQKTARLLNWRDELYL 164

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------------------LGNN 221
           S+   QA  L ++I+         +I GDFN                         L  +
Sbjct: 165 SVRLSQAISLAEFISSTSNPTDRVIIGGDFNATQRSLELQVMLILLRKRGYKLVSVLPPS 224

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---------IDYFVMDQN 265
             +   +   +  I       S  N   + ++            ID+     N
Sbjct: 225 IMYRPEMSEREKRINTVTLTYSDANMFNSPKDGWLVEGGDVPCQIDHIFFTSN 277


>gi|158312783|ref|YP_001505291.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
 gi|158108188|gb|ABW10385.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
          Length = 259

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 80/312 (25%), Gaps = 88/312 (28%)

Query: 24  VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------- 75
           +R+ S+N+ + LS  +G             +         +LD D++ LQE+        
Sbjct: 1   MRVGSFNVMHGLSLADG-----------RVEVDRFAAAVADLDCDVLGLQEVDLAQPRSG 49

Query: 76  -----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-----TAIAVRKKNVRVLQ 125
                +  A A   P   W    +      HS R +  +         IA+  +      
Sbjct: 50  GGDLAAAAATALGAPDTGWRFAPTVYGTPGHSWRPAEGERRTDEPAYGIALVSRLPVHRW 109

Query: 126 QSYPLLGAKDSFS---------------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
              PL  A                        R A+  +VE     + V+  HL      
Sbjct: 110 WVVPLGRAPVRSPILAPGANRRARLILLDDEPRVALAAVVETTSGPLTVVTTHLSFAPGW 169

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
           ++ +                             P V+ GD N     L      W+ +  
Sbjct: 170 NAFQLRRLVRRLR----------------GVDGPVVLLGDLNL-PGRLPTALTGWRRLAA 212

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           +                      ++ +D+ +            +                
Sbjct: 213 H--------------RTYPAHAPRVQLDHVLARGAVGTVAASAARRT------------- 245

Query: 291 RLSDHCPISIDY 302
           ++SDH  +  D 
Sbjct: 246 QISDHLALLTDI 257


>gi|71014651|ref|XP_758742.1| hypothetical protein UM02595.1 [Ustilago maydis 521]
 gi|46098532|gb|EAK83765.1| hypothetical protein UM02595.1 [Ustilago maydis 521]
          Length = 1178

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 84/316 (26%), Gaps = 48/316 (15%)

Query: 16  CTASVAQKVRLVSWNIN----------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
            ++S    + + ++N+N           L                     L  Q     D
Sbjct: 647 YSSSRDISIHVGTYNLNGKLPGESLIPWLFPDGEDREPDIFAIGFQEIVQLTPQQILMTD 706

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            D +   E      +A+     +  +   +E+L+  +           I ++++ +  ++
Sbjct: 707 PDKIRTWEAKIMETIARRSGGRSRYVLLRSEQLVGTALV---------ILIKEELINDVR 757

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                         +GN+  V + ++     I  +  H  +        N          
Sbjct: 758 LVEAATRKTGLKGMSGNKGGVAIRMDYFDTAICFVTAHFAAGHSAWEERNAD------YW 811

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------------GNNDDFWKTID 229
              + L     +   S    +  GDFN +I+                   + D   ++ D
Sbjct: 812 TITRGLSFARGKTVGSHDHVIWLGDFNYRIDLTNDAVRSMLAREDLVGLYSRDQLHRSKD 871

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEILYNEDDIK 286
             +    + +   +     K        D             +  +  F  +   +    
Sbjct: 872 AGEVFPGYEEGSITFAPTYKYDNGSDQYD----SSEKQRIPAWTDRILFRGLDLRQLSYS 927

Query: 287 SRGKRLSDHCPISIDY 302
               R SDH P+   +
Sbjct: 928 RAELRTSDHRPVYASF 943


>gi|21230598|ref|NP_636515.1| hypothetical protein XCC1140 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769406|ref|YP_244168.1| hypothetical protein XC_3102 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21112177|gb|AAM40439.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66574738|gb|AAY50148.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 435

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/383 (10%), Positives = 84/383 (21%), Gaps = 103/383 (26%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              ++ A  +R+ ++N +  S++ G  + +       +    +    + +  D+V L E 
Sbjct: 56  SAASTTAAPLRIATYNTSLYSDEAGGLVRELQGDSAHAR--KIAAVLQRVRPDLVLLNEF 113

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND------------------------- 109
             ++   +             +     +                                
Sbjct: 114 -DFDPAHRAADLFQQRYLQVAQPGGGDALSYPYRYLAPVNTGVPSGLDLDNNGSVGGDGR 172

Query: 110 -------------IHTAIAVRKKNVR------------VLQQSYPLLGAKDSFSRAGNRR 144
                            + V  +                      L     +  R     
Sbjct: 173 SRGNDAWGYGLHPGQYGMLVLSRYPIDAQAVRSFQLLKWSALPGALRPVDPATRRPFYND 232

Query: 145 AVELLVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           AV   + ++ K             +  L  H     F  + +   + +   L     +L 
Sbjct: 233 AVWAQLRLSSKSHWDVPVRTPLGVVHALVSHPTPPVFDGAEKRNAARNHDELQLWRAYLD 292

Query: 193 DWITQK------------KESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPK 239
           +                  E    FVI GD N    +  G ++     I+    L     
Sbjct: 293 NAADTTRWLCDDQGRCGGLERDAHFVILGDLNNDPIDGAGRHEAIRALINHPRVLKYPTP 352

Query: 240 EKDSR---------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                                               + +DY +             F   
Sbjct: 353 VSAGGPEKTAEYAAQGIAHTGDPHQVTGDFGPQAGTMRLDYVLPSHQFT-LAGSGIFWPA 411

Query: 279 LYNEDDIKSRGKRLSDHCPISID 301
             + D   + G   SDH  + +D
Sbjct: 412 GSSPDAAIADG---SDHHAVWVD 431


>gi|301103672|ref|XP_002900922.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101677|gb|EEY59729.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 278

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/251 (8%), Positives = 58/251 (23%), Gaps = 28/251 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+++S+N+        ++                ++  +    D++  QE        + 
Sbjct: 30  VKVMSFNLR-----TSLANDPCPSGCWEQRKWRAKKLVEKYGPDLIGTQEGAPDQI--QF 82

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F                      +           +         P L   ++++    R
Sbjct: 83  FQNELKLASTGDCAGDCQWNERDSIFYKADRWELLETSTFALSDTPDLIPSNTWNLQYLR 142

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV            V  ++      L   +++              + + ++   +S  
Sbjct: 143 AAVIARFRDKTSSRVVCMLNTHFDISLGQPQSSV------------LVANRLSHLCQSED 190

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK------DSRCNANKNLRN---K 254
             ++ GD N             +             +               +  +    
Sbjct: 191 TVIMTGDLNTVPQSSAVQYLANEGPIDGGYTPIPMYDTLTAAGSGGPTWIGSSFGSIPAG 250

Query: 255 IPIDYFVMDQN 265
           I  DY    ++
Sbjct: 251 IKFDYIFSRRD 261


>gi|156083036|ref|XP_001609002.1| endonuclease/exonuclease/phosphatase family domain containing
           protein [Babesia bovis T2Bo]
 gi|154796252|gb|EDO05434.1| endonuclease/exonuclease/phosphatase family domain containing
           protein [Babesia bovis]
          Length = 630

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 64/215 (29%), Gaps = 21/215 (9%)

Query: 22  QKVRLVSWN--INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           + V ++S+N    +L + + V+  ++ +   +  +  +    +  +AD+V LQE+     
Sbjct: 203 EPVVVMSFNCLARSLVDNKYVNNDRDVMSWNSRKF-AILDVLQQSEADVVCLQEVDEEEY 261

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                 +     + S  +        +       +   +    +L          D+   
Sbjct: 262 KNFFLTEFLALGYGSYFKKKK-----TPKLDGVCVLYNEDRFELLYHKDVEFAVHDADYD 316

Query: 140 AGNRRAVELLVEINGKKI--------WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW- 190
                 V  L+++  K +         +  I      F  +  +        L    +  
Sbjct: 317 RLQVAVVLALMDMRTKVVGQEDNEVRDIYIIANTHLLFNKNRGDVKFAQLCALLSAIKEV 376

Query: 191 ----LKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
               L+             ++ GDFN     L  +
Sbjct: 377 ESLCLERLENTSDNPKPAIIMCGDFNFTPQSLMYH 411


>gi|302410141|ref|XP_003002904.1| endonuclease/exonuclease/phosphatase family [Verticillium
           albo-atrum VaMs.102]
 gi|261357928|gb|EEY20356.1| endonuclease/exonuclease/phosphatase family [Verticillium
           albo-atrum VaMs.102]
          Length = 509

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 77/313 (24%), Gaps = 63/313 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R++++N+     Q                     ++    + DIV LQE  S     
Sbjct: 226 KTLRVLTFNMWHGGTQVDNYH------------EKQVRFLLESNVDIVGLQEDQSGRHAH 273

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++     W  + S+                  +  R    +   +     G + +     
Sbjct: 274 RLAHALGWHYWASSRS--------------VGVISRYPIAKKYGEINASGGVRIALDGDE 319

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-- 199
            +    ++             +   F  +D        + S  + Q       +  +   
Sbjct: 320 QQINFWVVHL----GYTPYGPYDFCFDGMDVETVIERETKSGRTPQITDTLAAMEGQIAS 375

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--------------------- 238
              VP ++ GDFN   ++L   +   K      ++                         
Sbjct: 376 AEDVPVLLVGDFNA-PSHLDWTEALRKKNCGYANVPWPTSVKTTDAGLVDSFRVANPDPV 434

Query: 239 ---KEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                  S      +        +  ID+     N       +              + +
Sbjct: 435 KVPGITWSPLFPFHDGATGRPEPQDRIDFIYHAGNLTVK-NSKDVVVGQPKPSPNHKQNE 493

Query: 291 RLSDHCPISIDYD 303
             +DH  I   Y+
Sbjct: 494 WTTDHATILTTYE 506


>gi|332663074|ref|YP_004445862.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332331888|gb|AEE48989.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 361

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 92/328 (28%), Gaps = 71/328 (21%)

Query: 24  VRLVSWNINT--------------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           + L+ WN+                        + +         +           AD  
Sbjct: 54  ISLMIWNLGYAGLGAEADFFYQGGGFFTSRGRMVRPPKPLVEQYFAGTTAAVNLYQADFY 113

Query: 70  FLQEMG----------SYNAVAKVFPKNTWCIFYSTERLINH----SKRDSNNDIHTAIA 115
             QE+            + A+ +  P      F +              ++   +++ +A
Sbjct: 114 LFQEVDYASKRSYYLNQFTAMQQKVPDFFAAYFPNYRAKRVPLPLLEPWNAYGAVNSGLA 173

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEIN-GKKIWVLDIHLKSFCFLDS 172
              K      +   L G      R     R       +   GK + V++IH ++F     
Sbjct: 174 TYAKFEPTESKRLQLPGKFGWPKRLFMLDRCLGFTRYKTRFGKDLVVINIHNEAFDKGG- 232

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------------- 219
                     +  QQ ++L+D    + +     +  GD+N    +L              
Sbjct: 233 ----------IKRQQEEFLRDLALAEYQKGNFVIAGGDWNTCPPFLPHDVFMKGKAPKGE 282

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESF 275
              +    + P D    +     +  N ++  +        IDYF++  N     ++   
Sbjct: 283 EGQNMNPALFPADWHWIYDPTVPTNRNNDQPYQAKKTFVTLIDYFLVSPNVKVRKVKG-- 340

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      S+  R SDH  + ++ +
Sbjct: 341 ----------ISQEFRFSDHQAVWMEVE 358


>gi|71030422|ref|XP_764853.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68351809|gb|EAN32570.1| hypothetical protein, conserved [Theileria parva]
          Length = 708

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 89/355 (25%), Gaps = 83/355 (23%)

Query: 25  RLVSWNIN---TLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEMGSY 77
           R+VS+NI     L+  +  S +         DY     L+ +    LD DI+ LQE    
Sbjct: 360 RVVSFNILSPTYLTSTDPSSTFFPYCPAEFLDYNYRNQLIGREINYLDPDILCLQEC--- 416

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDS 136
              ++    +     + T+     + +  N     AI V R     +            S
Sbjct: 417 ---SRKVYNDYLKFLFDTKYHSWLTVKGGNAGEGCAIFVKRSMFTPLELHDLYFKDVVKS 473

Query: 137 FSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQ------QAQ 189
                    +       G+          +  C+ +   N Y    +            +
Sbjct: 474 DEYNEITNKLCTKWLSYGENYFDKYHTVFQFGCYRNKRTNKYLFVANTHLYFHPMAGHIR 533

Query: 190 WLKDWITQKK----------------ESLVPFVIAGDFNRKINYLGNN------------ 221
            L+ ++   +                 S    ++ GDFN   N    N            
Sbjct: 534 LLQTYVMLNELEKFKIRAADKHGFDVNSDSYTLMCGDFNSFPNESIYNLILTGHVSYNHP 593

Query: 222 ---------------------------DDFWKTIDPNDSLIRFPKEKDSRCN-------A 247
                                      + +   ++ N+SL     +  S           
Sbjct: 594 DWSLGERFVYDKSFLVCDGFERLIEPVEVYEDDLNKNESLQVRNYQGYSDSYDQKQLPFT 653

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           N        +D+     N               +E          SDH  I+ D+
Sbjct: 654 NYCQVFNGTLDFIFHSNNVKVKRNMPGIKAEEASEYIGLPSKLYPSDHLSIAADF 708


>gi|317418605|emb|CBN80643.1| Deoxyribonuclease gamma [Dicentrarchus labrax]
          Length = 295

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 56/211 (26%), Gaps = 15/211 (7%)

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
           +      +     +          R   V +   SY              R    L    
Sbjct: 33  HHYTLKNSSRLGRTRYKEQFMFLYRDDMVDL-VGSYQFDDQVTEGGDVFARDPYILRFRC 91

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
               +  L +        DS +            + +W               +I GDFN
Sbjct: 92  LNTVLKDLVMIPVHTKPDDSEKELDELYDVFRHVKKKW----------RTNNVMILGDFN 141

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
               Y+   +     I  + +      +      +N+N      I   V   +  + ++ 
Sbjct: 142 ADGLYVSKKEMKGIRIRSDKNFHWLIGDDVDTTASNRNDHTYDRI--VVYGDDMLQAVVP 199

Query: 273 ESFSEILYNEDDIKSRGK--RLSDHCPISID 301
            S     + +    S  +  ++SDH P+ ++
Sbjct: 200 NSAKPFNFQKAYGLSEEQALKVSDHYPVEVE 230


>gi|290983315|ref|XP_002674374.1| endonuclease/exonuclease/phosphatase family member [Naegleria
           gruberi]
 gi|284087964|gb|EFC41630.1| endonuclease/exonuclease/phosphatase family member [Naegleria
           gruberi]
          Length = 322

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 80/314 (25%), Gaps = 51/314 (16%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR-----TTSDYTLLRQYAKNLDADIVFL 71
           T +   +  + S N+      +    +     +      +     L +       DI+ L
Sbjct: 29  TLTEPNQFSVYSQNLLAGYWTDLDRYYFVEEPKEEHYEWSGRVKKLLRDFTIHQPDILCL 88

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+        V                   K+  +  +      ++    ++       
Sbjct: 89  QEVELACFEKDVLEPLQK---VDESYRGVAQKKLGDFPVGVGCIFKESVFELV------- 138

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                     +   + L  + N   I+V   HL                      Q +  
Sbjct: 139 ----EVFERSSVIILVLKFKANDTLIYVSSCHLMGDP----------RKPQTRINQLKSY 184

Query: 192 KDWITQKKE-SLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCN- 246
              +   ++    P ++AGDFN + N    +   + F K     + +I    +       
Sbjct: 185 FKHLKNYQKGKDHPVIVAGDFNTEPNSATYDYVVNGFLKGKSEENDVIATDTDIKHTFKL 244

Query: 247 --------------ANKNLRNKIPIDYFVMDQNAYKFLIQESF---SEILYNEDDIKSRG 289
                           + + + +  DY      + K     S     +  + E       
Sbjct: 245 KSAYKEINGKEPEMTLRTINSSLTCDYLFYTNESLKLNNVMSLYENGDKTHMERLGLPNS 304

Query: 290 KRLSDHCPISIDYD 303
           K  SDH  +   + 
Sbjct: 305 KYGSDHLGLQAHFT 318


>gi|156034663|ref|XP_001585750.1| hypothetical protein SS1G_13266 [Sclerotinia sclerotiorum 1980]
 gi|154698670|gb|EDN98408.1| hypothetical protein SS1G_13266 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 498

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/353 (8%), Positives = 72/353 (20%), Gaps = 87/353 (24%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQE 73
             +    ++ +++ N   L         K          T + +   +      IV LQE
Sbjct: 3   SPSPEVDEINIITLNCWGL---------KFLSDLRNERLTEIGKAIGSASPTPHIVGLQE 53

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-- 131
             +      +  +    + Y                    +A+  K        +     
Sbjct: 54  CWTQQDYKSIRNETKHILPYGKFYHSGIFGG--------GLAILSKWPIEESSMFRYPLN 105

Query: 132 ---GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               A         +      +        ++++              +       + QA
Sbjct: 106 GRPTAFFRGDWFVGKGVAGARIRYGQGAKDIVEVFTTHLHAP-YETEPHDSYICHRTAQA 164

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDP---------- 230
             +   +    E     +  GDFN           +      D W  + P          
Sbjct: 165 WEIAKLMRGAAERGHLVLGLGDFNMVPLSLAHRLISTHSPARDVWMVLHPDCSIGAAIDE 224

Query: 231 --------------NDSLIRFPKEKDSRCN-------------------ANKNLRNKI-P 256
                         N        +                                +   
Sbjct: 225 VEKARHRPIPTAEFNLLENGATCDSVLNTWRWNKGQQKRLGPNRPEIEIPGDTPDPRAKR 284

Query: 257 IDYFVM-------DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +DY          + +A  ++++ +    +            LSDH  +    
Sbjct: 285 LDYIFANTCFDESNPSAGGWIVKNA---RVGMLQRHSKYQCSLSDHFSVEATL 334


>gi|47216898|emb|CAG02070.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 929

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/267 (10%), Positives = 75/267 (28%), Gaps = 32/267 (11%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKVFPK 86
           +NI     ++   +             ++ Q       DI+ +QE+   +  A  K+  +
Sbjct: 28  FNIQCFGNKKASDVPV---------MDIISQIVHRY--DIILIQEVRDSDMSATKKLMER 76

Query: 87  -NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            N     ++   +++     S          R+ +V V +      G +   +   +R  
Sbjct: 77  VNRGSPAFTYSYIVSEPLGSSTYKERYLFLYREASVSVAKNYTYDDGCEPCGTDTFSREP 136

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLV 203
             ++       +    +  +      +             ++   L D +       +  
Sbjct: 137 FVVMFSSKQAAVGNFVLIPQHTRPGSA------------VKEIDALYDVVADVYRRWNTK 184

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             ++ GDFN   +Y+   D     +  + S                        D  V+ 
Sbjct: 185 DILLLGDFNAGGSYVTQYDWQCIRLFTDKSFHWLITNDVYTMV----KGTPSSFDRIVVT 240

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGK 290
            +  + +   S +   Y      ++  
Sbjct: 241 TDMMRRVKPGSAAVYNYKTHLGLTQEW 267



 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 80/285 (28%), Gaps = 43/285 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
           +  + L ++NI +           +      +   ++ Q       DI+ +QE+   +  
Sbjct: 269 SHPLLLGAFNIKSFG---------DKKASNETLMDIISQIVHRY--DIILIQEVRDSDLS 317

Query: 79  AVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           A  K+    N     +    + +     S          RK +V V           D  
Sbjct: 318 ATKKLMECVNRGSPLFRYNYIDSEPLGRSPYKERYLFLYRKASVSVAGS-----YTYDDT 372

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            R  +R    ++       +    +  +      +             ++   L D +  
Sbjct: 373 PRKFSREPFVVMFSPKQPAVGNFVLIPQHTSPSSA------------VKEIDALYDVVAD 420

Query: 198 KKE--SLVPFVIAGDFNRKINYLGNNDD----------FWKTIDPNDSLIRFPKEKDSRC 245
                +    ++ GDFN   +Y+  +D           F   I         P+      
Sbjct: 421 VGRRWNTKDILLLGDFNAGCSYVTGSDWQKIRLFTNKSFHWLITDAADTTVSPRRTAPTT 480

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           + + +    + +   V+  +  + +   S +   +      ++  
Sbjct: 481 DTDPSQAGLLCLCRIVVTTDMMRRVKLGSAAVYDFKTHLGLTQEW 525



 Score = 41.8 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/220 (11%), Positives = 63/220 (28%), Gaps = 28/220 (12%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAKVFPK 86
           +NI +           +      +   ++ Q       DI+ +QE+   +  A  K+  +
Sbjct: 732 FNIKSFG---------DKKASNETLMDIISQIVHRY--DIILIQEVRDSDLSATKKLMER 780

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                   +  +     R +          R+ +V V +      G +   +   +R   
Sbjct: 781 VNRGSPLYSHIVSEPLGRSTY-KERYLFLYREASVSVAKNYTYDDGCEPCGTDTFSREPF 839

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE--SLVP 204
            ++       +    +  +      +             ++   L D +       +   
Sbjct: 840 VVMFSSKQAAVGNFVLIPQHTSPSSA------------VEEIDALYDVVADVGRRWNTKD 887

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
            ++ GDFN   NY+  +D     +  + S      +    
Sbjct: 888 ILLLGDFNAGCNYVTGSDWQKIRLFTDKSFHWLITDDVDT 927


>gi|302846843|ref|XP_002954957.1| hypothetical protein VOLCADRAFT_106613 [Volvox carteri f.
           nagariensis]
 gi|300259720|gb|EFJ43945.1| hypothetical protein VOLCADRAFT_106613 [Volvox carteri f.
           nagariensis]
          Length = 399

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 80/336 (23%), Gaps = 75/336 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA-----KNLDADIVFLQEMGSY 77
            +++++ N   L        W  S KR       L ++      +    D+V LQE+   
Sbjct: 3   PLQILTLNTWGL--------WLISKKRYNRILH-LAEFLANDAQQKHKLDVVLLQEVWVD 53

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--LLGAKD 135
             V ++          S           S     ++   R  +  V Q  +      + +
Sbjct: 54  TDV-RILASAAEQGGLSHCMHFRSGVFGSGLLTLSSQLDRTLSGSVAQIPFTAGDPASIN 112

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC------------------------FLD 171
                  +      +      + V + HL +                             
Sbjct: 113 CGDYLAAKGVGWTRLATPSGPLDVFNTHLHANYSHKYGSSTGAQYGNRGAASPGAPNHDC 172

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQK----------KESLVPFVIAGDFNRKINYLGNN 221
                     +    Q   L  ++                 +  V+ GD N + + L  +
Sbjct: 173 IPPPAVDEFAAFRMAQVLELARFVRHVTSSLASPSGGSSRPLGVVLGGDLNCEPHTLEAH 232

Query: 222 --DDFWKTIDPNDS-----------LIRFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAY 267
                   +                        ++ C++ K  R +   IDY        
Sbjct: 233 VLRALLPRLQDAWLETHGSLGDPSEADAAGHTCNANCSSFKPRRQRPSRIDYVFTT---- 288

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ++                 G   SDH  + +  +
Sbjct: 289 LRVVACEL------ALQKTPEGHSFSDHIAVQVRLE 318


>gi|212716745|ref|ZP_03324873.1| hypothetical protein BIFCAT_01682 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660449|gb|EEB21024.1| hypothetical protein BIFCAT_01682 [Bifidobacterium catenulatum DSM
           16992]
          Length = 344

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/286 (9%), Positives = 69/286 (24%), Gaps = 57/286 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           ++   + R+++ N                     ++   +    K  D  ++ LQE+   
Sbjct: 114 SAKHGRFRVMTLNCRF----------------GRANAAAIVSAVKKHDIAVLALQELTDD 157

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                     +  +            + ++N     + +R +    +     ++ A D  
Sbjct: 158 LVAQLDASGLSDLL----PYRQLGENKGTDNGGFNGVWIRIE-PSDMSPVTAVIPAADVP 212

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                  ++        + I  +  H KS        +                   +  
Sbjct: 213 GVCFPIDSM--------RGITFVSAHPKSPMRGCKEWSAGIIGLGE-----------LAT 253

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            ++     V+ GD N   ++                     +        +     +I +
Sbjct: 254 TQKQGDITVVLGDLNSGTDHPSFRKLLNSGFKDAALCEAKGRHA---TFPSWLPWPRIIL 310

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+ +  +  Y   +     E               SDH  +     
Sbjct: 311 DHVLFTKGLYASDVSSFCVE--------------GSDHLALVATLT 342


>gi|209737394|gb|ACI69566.1| Deoxyribonuclease gamma precursor [Salmo salar]
          Length = 274

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 70/284 (24%), Gaps = 29/284 (10%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           +++ S+NI                    +    L +       DI+ + E+   +     
Sbjct: 1   MKVASFNIQKFG---------QRKLSNPNTLATLVKIVSRY--DIIVILEVVDESGTSVE 49

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +   N           I+                R   V ++  ++     +     A
Sbjct: 50  KFLKELNKANKKQHYTLQISSRLGRDRYKEQFMFLYRDDLVDLVN-TWQYEDNQAGDVDA 108

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R    L      K +  +   L         E++      L     +  K W      
Sbjct: 109 FAREPYILRF----KCLHSVLEDLVLIPVHTKPEDSVKELDELYDVCLEVTKKW------ 158

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                +I GDFN   +YL         I  + +     K+         N      I   
Sbjct: 159 KTDNVMILGDFNADGSYLSKKAMKAIRIRSDKNFHWLIKDDVDTTANTGNDNTYDRI--V 216

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHCPISIDY 302
           +   +    L+                     ++SD  P+ ++ 
Sbjct: 217 IYGVDMLNALVPNFAKPFNLQIAYGLFEEDALKVSDPFPVGVEL 260


>gi|119613776|gb|EAW93370.1| angel homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
          Length = 522

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 144 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 203

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +       D   
Sbjct: 204 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISL 258

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      + C  ++          +   Q   L   I+  
Sbjct: 259 LDRDNVGLVLLLQPK-----IPYAACPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 313

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 314 AHQKDGSFCPIVMCGDFNSVPGSPLY 339


>gi|71066077|ref|YP_264804.1| hypothetical protein Psyc_1522 [Psychrobacter arcticus 273-4]
 gi|71039062|gb|AAZ19370.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 372

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/255 (11%), Positives = 61/255 (23%), Gaps = 45/255 (17%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           T  D   L +  +    DI+   E               W    +              D
Sbjct: 118 TNDDTYKLVELVQQKQPDILITLESD-----------EKWEKALNQVESDYPYTVKVPLD 166

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               + +  K   +  +   L+           R          G+ +W+  +H      
Sbjct: 167 NLYGMHLYSKLELIEPEIKYLIIDDIPSIHTRLRL-------QGGRVVWLYCLHPMPPSP 219

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
            ++ ++T   +          L       K++    ++AGD N            ++ I 
Sbjct: 220 TEADKSTTRDA---------ELLMVGKHIKDNKQTAILAGDLNDVAWSQTTRR--FQRIS 268

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               L                   +  +D+                    +   DI+   
Sbjct: 269 --GLLDPRIGRHFINTFHVNYPFLRWALDHLFHSA--------------CFTVIDIERLP 312

Query: 290 KRLSDHCPISIDYDF 304
              SDH P+     +
Sbjct: 313 SIGSDHFPVMTTLQY 327


>gi|213028732|ref|ZP_03343179.1| hypothetical protein Salmonelentericaenterica_43473 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 126

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 31/122 (25%), Gaps = 18/122 (14%)

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            S    Q   L  W+        P ++AGDFN      G        ++       F + 
Sbjct: 21  ESHRQAQLTMLAGWVNA-LPESEPVLVAGDFNDWRQKAGP------PLNAAGLEEIFTRA 73

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + +D   +                           + LSDH P+S 
Sbjct: 74  HGRPARTFPVSMPLLRLDRIYVKNANASS-----------PGALPLRNWRHLSDHAPLSA 122

Query: 301 DY 302
           + 
Sbjct: 123 EI 124


>gi|57087367|ref|XP_546863.1| PREDICTED: similar to sphingomyelin phosphodiesterase 3, neutral
           [Canis familiaris]
          Length = 658

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 80/303 (26%), Gaps = 75/303 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A AK+  +    +        +       S   +++ +    +   
Sbjct: 357 NLDFLCLQEVFDKRAAAKLKDQLHGYFEYILYDVGVYGCQGCCSFKFLNSGLFFASRYPI 416

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +    +     + S   A ++ A+ L V++         +   S   L +L        +
Sbjct: 417 MDVAYHCYPNGRRSDGLA-SKGALFLKVQVGSTPQDQRIVGYISCTHLHALP----EDSA 471

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +  +Q   L+DW+   ++S                VI GD N                  
Sbjct: 472 IRCEQLDLLQDWLADFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSDDKLEQQHSLFT 531

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSR----------------CNANKNL 251
                              T+   D+L                             +K+ 
Sbjct: 532 HYKDPCRLGPGEEKSWAIGTLLDTDNLYDEEVCTPDNLQKVLESEEGRREYLAFPTSKSP 591

Query: 252 ------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                        N   IDY +  +       +    E  +           L+DH P++
Sbjct: 592 GAGQKGRKDLLKGNGRRIDYILYAEEGLWPDWKAEVEEFSFITQL-----SGLTDHLPVA 646

Query: 300 IDY 302
           +  
Sbjct: 647 MRL 649


>gi|197101543|ref|NP_001125837.1| protein angel homolog 2 [Pongo abelii]
 gi|55729392|emb|CAH91428.1| hypothetical protein [Pongo abelii]
          Length = 522

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 63/206 (30%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 144 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 203

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +           
Sbjct: 204 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPGISL 258

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      + C  ++          +   Q   L   I+  
Sbjct: 259 LDRDNVGLVLLLQPK-----IPCAASPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 313

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 314 AHQKDGSFCPIVMCGDFNSVPGSPLY 339


>gi|254386858|ref|ZP_05002146.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194345691|gb|EDX26657.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 342

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 88/318 (27%), Gaps = 85/318 (26%)

Query: 2   IRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48
           +RK   AL+  L+                +     + + + N++  +     +       
Sbjct: 91  VRKSATALIAILLTAVVWVNLFGGLVTDKSGSGGNLVVATHNVDADNPDPKST------- 143

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                     Q      +D++ L E+       K     T+  +           +  + 
Sbjct: 144 ---------AQSLAKSGSDVLALTEL-------KAGAVPTYEKYL------GAVYKYHSV 181

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-F 167
           +    +  +          YPL  ++    R G  RA+   V      I V   HL S  
Sbjct: 182 EGTVGVWSK----------YPLTASQAVDIRLGWTRAMRATVSSPQGPIAVFVAHLPSVR 231

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
             L++         S  +  A    + + +        ++ GD N  +N         ++
Sbjct: 232 VKLNAGFTANQRDNSADALGAALAAEPLKK-------VILLGDLNGTMND--------RS 276

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           +    S +R  +                   ID  ++       +  E+   +       
Sbjct: 277 LSEVTSQMRSTQGAAGDGFGFTWPAQFPMARIDQIMVRG-----IQPEASWSLP------ 325

Query: 286 KSRGKRLSDHCPISIDYD 303
               +  SDH PI+    
Sbjct: 326 ----RTGSDHLPIAARVT 339


>gi|257055561|ref|YP_003133393.1| endonuclease/exonuclease/phosphatase family protein
           [Saccharomonospora viridis DSM 43017]
 gi|256585433|gb|ACU96566.1| endonuclease/exonuclease/phosphatase family protein
           [Saccharomonospora viridis DSM 43017]
          Length = 396

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/398 (10%), Positives = 95/398 (23%), Gaps = 102/398 (25%)

Query: 1   MIRKYVLALVFFLVPCTA---SVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
           M + +V+AL   +V       + A       VR  ++N  +L+      L  +       
Sbjct: 1   MRKTWVVALAATMVMSATVGTAQARPGPQDTVRFATFN-ASLNRTAEGELLDDLSTPDDE 59

Query: 53  DYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNT------------WCIFYSTERL 98
               + +  +    D++ + E      NA A  F +N             +   Y+    
Sbjct: 60  QARAVAEVIQRSRPDVLLVNEFDYVPNNAAADAFRRNYLEVPQNGAEPIRYRYAYTAPVN 119

Query: 99  -----------------INHSKRDSNNDIHTAIAVRKKNVRVLQQ--------------- 126
                             + +           + V  +     ++               
Sbjct: 120 TGVQTGHDLNRDGMVGGPDDAHGFGEFVGQYGMLVLSRYPIDTERVRTFRTFLWKDMPGA 179

Query: 127 ---SYPLLGAKDSFSRAGNRRAVE--------LLVEINGKKIWVLDIHLKSFCFLDSLEN 175
                P       +      + +         + + +  + + VL  H     F    + 
Sbjct: 180 LLPDDPATPEPADWYSPEILKTLRLSSKSHWDIPIRVGKRVVHVLAAHPTPPSFDGPEDR 239

Query: 176 TYSPSCSLLSQQAQWLK----DWITQKK------ESLVPFVIAGDFNRKINYLGNNDDFW 225
             + +   +   A ++     D++           +   FVI GD+N       + D+  
Sbjct: 240 NGTRNHDEIRFWADYVTPGRGDYVYDDAGRRGGLSAGERFVIVGDYNADPFDGDSTDNAI 299

Query: 226 KTIDPNDSLIRFPKEKDS--------RCNANKNLRNKI--------------PIDYFVMD 263
           + +     +                     + +                    +DY +  
Sbjct: 300 QQLLDAPRVRDTAPASVGAVVAARLQGGANDAHRGRPWLDTADFGDESPGNLRVDYVLPS 359

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +                            SDH  + +D
Sbjct: 360 RGM----KTGRSGVFWPVPGTRLDYLNDASDHHLVWVD 393


>gi|315125744|ref|YP_004067747.1| hypothetical protein PSM_A0646 [Pseudoalteromonas sp. SM9913]
 gi|315014258|gb|ADT67596.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 359

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 73/288 (25%), Gaps = 61/288 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               ++   +R++S N+   +                     L       + D++   E 
Sbjct: 92  SAPENINHSIRIMSANVLMSNHNS----------------EQLISLVNTYEPDLLITLES 135

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S+           W    S  +     +     D    + V  K   +  Q   L+   
Sbjct: 136 DSW-----------WQDKLSVLKKNYPYQVQCPKDNRYGMHVFSKFNILDAQICELIEDN 184

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                      + +L E N + + +    +       + E++  P  S L   A+ L   
Sbjct: 185 IPS--------IHILFE-NHQGLKMQGHFIHPAPPSPTEEDSSRPRDSELIMVAKAL--- 232

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
               K    P ++AGD N              +      L                   +
Sbjct: 233 ----KNPSRPTIVAGDLNDVAWSRSTRLFMQIS----GFLDPRKGRGFYNTFHAGYFFMR 284

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            P+D+                    +    IK   K  SDH  +  + 
Sbjct: 285 WPLDHLFHS--------------TGFTVKRIKRLAKYGSDHFALLTEL 318


>gi|300797751|ref|NP_001179292.1| sphingomyelin phosphodiesterase 3 [Bos taurus]
 gi|297485381|ref|XP_002694875.1| PREDICTED: neutral sphingomyelin phosphodiesterase 3-like [Bos
           taurus]
 gi|296478112|gb|DAA20227.1| neutral sphingomyelin phosphodiesterase 3-like [Bos taurus]
          Length = 656

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 77/299 (25%), Gaps = 67/299 (22%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A AK+  +    +        +       S   +++ +    +   
Sbjct: 355 NLDFLCLQEVFDKRAAAKLKDQLHSYFEYILYDVGVYGCHGCCSFKCLNSGLFFASRYPI 414

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +    +     + S S A ++ A+ L V++         +   S   L +L       C 
Sbjct: 415 MDVAYHCYPNGRFSDSLA-SKGALYLKVQVGSTPQDQRIVGYISCTHLHALSEDSDIRCE 473

Query: 183 LLSQQAQWLKDWITQKKESLVPF--------VIAGDFNRKINYLG--------------- 219
            L+    WL D+      S            +I GDFN                      
Sbjct: 474 QLNMLQDWLADFRKSTSSSSAANPEELVAFDIICGDFNFDNCSSDDKLEQQHSLFTRYKD 533

Query: 220 --------NNDDFWKTIDPNDSLIRFPKEKDSR----------------CNANKNL---- 251
                          T+   D L                             +K+     
Sbjct: 534 PCRLGPGEEKPWAIGTLLDQDGLYDEEVCTPDNLQKVLESEEGRREYLAFPTSKSPGGGQ 593

Query: 252 --------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    N   IDY +  +       +    E  +           L+DH P+++  
Sbjct: 594 KGRKELLKGNGRRIDYMLHGEEGLYPDWKAEVEEFSFITQL-----SGLTDHLPVAMRL 647


>gi|68536781|ref|YP_251486.1| putative exodeoxyribonuclease [Corynebacterium jeikeium K411]
 gi|260579135|ref|ZP_05847027.1| exodeoxyribonuclease [Corynebacterium jeikeium ATCC 43734]
 gi|68264380|emb|CAI37868.1| putative exodeoxyribonuclease [Corynebacterium jeikeium K411]
 gi|258602734|gb|EEW16019.1| exodeoxyribonuclease [Corynebacterium jeikeium ATCC 43734]
          Length = 336

 Score = 56.1 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 63/203 (31%), Gaps = 21/203 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + + + + N+N +     V            D   +  + K   AD+V +QE+ +     
Sbjct: 2   KSLTIATVNVNGIRAAAKVR---------HEDNQGILPWLKATPADVVLMQEVRADEKQT 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +     ++  +       R         +A+  +      Q     G         
Sbjct: 53  RAALEPVLDQWHLAQAPAAAKGRA-------GVAILSRLPLRDVQIGFGDGPGSEEFSDS 105

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  +E  V+     + V  ++L S       ++             ++L+    + ++ 
Sbjct: 106 GRY-IEATVDAGDLPVRVASLYLPSGSAGTEKQDEKYRFLDSFG---EYLQSRADRAEQG 161

Query: 202 LVP-FVIAGDFNRKINYLGNNDD 223
            +P  V+ GD+N         + 
Sbjct: 162 GLPELVVGGDWNICHRREDLKNW 184



 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 32/117 (27%), Gaps = 19/117 (16%)

Query: 200 ESLVPFVIAGDF----NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK- 254
            +  P  +AGDF    + K   L          +         +    +         + 
Sbjct: 223 RNGNPAGVAGDFFGAVDYKPGDLAAARLAAGAAEEPHYFDVMRRVLPDQAGPYSWWTYRG 282

Query: 255 --------IPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                     ID  V  +      L   +        D   +  +R SDH P+ ++Y
Sbjct: 283 QAFDTDAGWRIDLQVATRGMLDRALTANNVWV-----DKAAAYDQRWSDHSPVLVEY 334


>gi|308370133|ref|ZP_07420409.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu002]
 gi|308371792|ref|ZP_07426247.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu004]
 gi|308372962|ref|ZP_07430565.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu005]
 gi|308325219|gb|EFP14070.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu002]
 gi|308335379|gb|EFP24230.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu004]
 gi|308339186|gb|EFP28037.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu005]
          Length = 507

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 89/299 (29%), Gaps = 31/299 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           VF     T +++    ++++NI  L      ++           +   ++  K L+A  V
Sbjct: 228 VFVGNTPTDTISGDFSMLTYNIAGLPFPLSSAILP--------RFFYTKEIGKRLNAYYV 279

Query: 70  F-LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             +QE   +     +  K+        E                      K  R+ +Q++
Sbjct: 280 ANVQE--DFAYHQFLIKKSKMPSQTPPEPPTLLWPIGVPFSDGLNTLSEFKVQRLDRQTW 337

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               + +  +  G       +    G  + V ++H  +     +  N             
Sbjct: 338 YECTSDNCLTLKG--FTYSQMRLPGGDTVDVYNLHTNTGGGPTTNAN------------L 383

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             + ++I Q   +    ++ GDFN + +   +    +  ++         +   +     
Sbjct: 384 AQVANYIQQN-SAGRAVIVTGDFNARYSDDQSALLQFAQVNGLTDAWVQVEHGPTTPPFA 442

Query: 249 KNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      +D           L   S+           S+G+ LSDH P  + + +
Sbjct: 443 PTCMVGNECELLDKIFYRSGQGVTLQAVSYGNEAPK--FFNSKGEPLSDHSPAVVGFHY 499


>gi|225438167|ref|XP_002262729.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 1167

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/269 (10%), Positives = 67/269 (24%), Gaps = 55/269 (20%)

Query: 44  KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
            +  K   S   +++ Y +N   D++ +QE         +        F     L     
Sbjct: 433 PSQGKGDHSKRKIIKNYIRNQRVDLMCIQETKIQEMSEGIVRSLGSGRFLDWRALNAEGA 492

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLD 161
                     I +      +                   + ++    +   NG       
Sbjct: 493 AG-------GILICWDKRVLE-----------ILDWEEGQFSLSCRFKTIENGATWAFTG 534

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           ++                +   L                   P+ + GDFN  +     +
Sbjct: 535 VYGPFTKVEREGMWEELGAIRGLW----------------DDPWCLGGDFNITLFQHERS 578

Query: 222 ---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                      F + +D  + +    +  +   +   N +    +D F++  +       
Sbjct: 579 SQRRISSAMRRFAEFVDDLELVDLPLQGGEFTWSGGLNNQAWARLDRFLVSPS------- 631

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  ++        +  SDH PI ++
Sbjct: 632 ---WLDQFSGITQGRLSRPTSDHFPIVLE 657


>gi|148227204|ref|NP_001086779.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Xenopus
           laevis]
 gi|50415222|gb|AAH77433.1| Apex2-prov protein [Xenopus laevis]
          Length = 517

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 80/335 (23%), Gaps = 88/335 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           +++VSWNIN +                      L++   +LDADI+ LQE      +   
Sbjct: 1   MKIVSWNINGIRATRVG----------------LKETLDSLDADIICLQETKVTRDLLDE 44

Query: 82  KVFPKNTWCIFYSTER-LINHSKRDSNNDIHTA-----------IAVRKKNVRVLQQSYP 129
                  +  ++S  R    +S   +     T               R  +V     +  
Sbjct: 45  PSAIVEGYNSYFSFSRVRSGYSGVATFCKSSTTPQAAEEGLSGVFCNRTGSVGCYGNTEQ 104

Query: 130 LLGAKDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            L  +        R  +    ++    K+  +  I++             +         
Sbjct: 105 FLEEELQSLDQEGRAVLTQHRILNCEDKEETLTVINVYCPRADPEKPERKTYKLRFYH-- 162

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFWKTIDP--- 230
              L+       ++    +I GD N                           + +     
Sbjct: 163 --LLQTRAEAILQNGGHVIILGDVNTSHRPLDHCDPTDLETFEENPGRQWLNQFLGDPIP 220

Query: 231 ----------------NDSLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQN 265
                                 F     ++ NA                  IDY + ++ 
Sbjct: 221 SQKGDSETVMPPSAGSGLFYDSFRYFHPTQKNAFTCWCSASGARQTNYGTRIDYILGNRE 280

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                            D +       SDHCP+  
Sbjct: 281 L----------VESEFLDSVIMPEVEGSDHCPVKA 305


>gi|15840306|ref|NP_335343.1| hypothetical protein MT0911 [Mycobacterium tuberculosis CDC1551]
 gi|215429745|ref|ZP_03427664.1| hypothetical protein MtubE_03415 [Mycobacterium tuberculosis
           EAS054]
 gi|219556754|ref|ZP_03535830.1| hypothetical protein MtubT1_05360 [Mycobacterium tuberculosis T17]
 gi|253800088|ref|YP_003033089.1| hypothetical protein TBMG_03100 [Mycobacterium tuberculosis KZN
           1435]
 gi|308378751|ref|ZP_07483783.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu010]
 gi|308379897|ref|ZP_07488020.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu011]
 gi|13880468|gb|AAK45157.1| hypothetical protein MT0911 [Mycobacterium tuberculosis CDC1551]
 gi|253321591|gb|ACT26194.1| hypothetical exported protein [Mycobacterium tuberculosis KZN 1435]
 gi|308359261|gb|EFP48112.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu010]
 gi|308363171|gb|EFP52022.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu011]
 gi|323720597|gb|EGB29675.1| hypothetical protein TMMG_02877 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 507

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 89/299 (29%), Gaps = 31/299 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           VF     T +++    ++++NI  L      ++           +   ++  K L+A  V
Sbjct: 228 VFVGNTPTDTISGDFSMLTYNIAGLPFPLSSAILP--------RFFYTKEIGKRLNAYYV 279

Query: 70  F-LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             +QE   +     +  K+        E                      K  R+ +Q++
Sbjct: 280 ANVQE--DFAYHQFLIKKSKMPSQTPPEPPTLLWPIGVPFSDGLNTLSEFKVQRLDRQTW 337

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               + +  +  G       +    G  + V ++H  +     +  N             
Sbjct: 338 YECTSDNCLTLKG--FTYSQMRLPGGDTVDVYNLHTNTGGGPTTNAN------------L 383

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             + ++I Q   +    ++ GDFN + +   +    +  ++         +   +     
Sbjct: 384 AQVANYIQQN-SAGRAVIVTGDFNARYSDDQSALLQFAQVNGLTDAWVQVEHGPTTPPFA 442

Query: 249 KNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      +D           L   S+           S+G+ LSDH P  + + +
Sbjct: 443 PTCMVGNECELLDKIFYRSGQGVTLQAVSYGNEAPK--FFNSKGEPLSDHSPAVVGFHY 499


>gi|148822098|ref|YP_001286852.1| hypothetical protein TBFG_10907 [Mycobacterium tuberculosis F11]
 gi|215410475|ref|ZP_03419283.1| hypothetical protein Mtub9_03912 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426155|ref|ZP_03424074.1| hypothetical protein MtubT9_07096 [Mycobacterium tuberculosis T92]
 gi|254231196|ref|ZP_04924523.1| hypothetical exported protein [Mycobacterium tuberculosis C]
 gi|254363819|ref|ZP_04979865.1| hypothetical exported protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|289555329|ref|ZP_06444539.1| hypothetical exported protein [Mycobacterium tuberculosis KZN 605]
 gi|308231664|ref|ZP_07413351.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu001]
 gi|308377539|ref|ZP_07479587.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu009]
 gi|308397496|ref|ZP_07492523.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu012]
 gi|124600255|gb|EAY59265.1| hypothetical exported protein [Mycobacterium tuberculosis C]
 gi|134149333|gb|EBA41378.1| hypothetical exported protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148720625|gb|ABR05250.1| hypothetical exported protein [Mycobacterium tuberculosis F11]
 gi|289439961|gb|EFD22454.1| hypothetical exported protein [Mycobacterium tuberculosis KZN 605]
 gi|308216367|gb|EFO75766.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu001]
 gi|308355322|gb|EFP44173.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu009]
 gi|308366827|gb|EFP55678.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu012]
 gi|328459826|gb|AEB05249.1| hypothetical exported protein [Mycobacterium tuberculosis KZN 4207]
          Length = 500

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 89/299 (29%), Gaps = 31/299 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           VF     T +++    ++++NI  L      ++           +   ++  K L+A  V
Sbjct: 221 VFVGNTPTDTISGDFSMLTYNIAGLPFPLSSAILP--------RFFYTKEIGKRLNAYYV 272

Query: 70  F-LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             +QE   +     +  K+        E                      K  R+ +Q++
Sbjct: 273 ANVQE--DFAYHQFLIKKSKMPSQTPPEPPTLLWPIGVPFSDGLNTLSEFKVQRLDRQTW 330

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               + +  +  G       +    G  + V ++H  +     +  N             
Sbjct: 331 YECTSDNCLTLKG--FTYSQMRLPGGDTVDVYNLHTNTGGGPTTNAN------------L 376

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             + ++I Q   +    ++ GDFN + +   +    +  ++         +   +     
Sbjct: 377 AQVANYIQQN-SAGRAVIVTGDFNARYSDDQSALLQFAQVNGLTDAWVQVEHGPTTPPFA 435

Query: 249 KNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      +D           L   S+           S+G+ LSDH P  + + +
Sbjct: 436 PTCMVGNECELLDKIFYRSGQGVTLQAVSYGNEAPK--FFNSKGEPLSDHSPAVVGFHY 492


>gi|169833966|ref|YP_001694067.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|168996468|gb|ACA37080.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae Hungary19A-6]
          Length = 333

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 90/292 (30%), Gaps = 52/292 (17%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++   ++  + ++LV+WN+                     +   + +   + DAD+    
Sbjct: 94  ILSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFP 136

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ +     +   +           + N+    ++   ++ IA       ++++SY    
Sbjct: 137 ELATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA---PVTVIVKKSYGFYT 192

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             ++F     R    +L         ++ +H                   L+    Q L 
Sbjct: 193 EAETFHT--TRFGTIVLHSRKQDIPDIIALHTAPPLPG------------LMEIWKQDLN 238

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
               Q        +IAGDFN  +     +    K     D+L   P  +    N+     
Sbjct: 239 IIHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNALPPFERGTWNSQSPKL 294

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 295 FNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|226309148|ref|YP_002769108.1| hypothetical protein RER_56610 [Rhodococcus erythropolis PR4]
 gi|226188265|dbj|BAH36369.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 365

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/335 (11%), Positives = 87/335 (25%), Gaps = 60/335 (17%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
           A+ AQ+++++S N      +                  L+     +  A IV L E G+ 
Sbjct: 28  ANPAQEIKVLSLNTWHGGTKINGG------------LQLIADMIISTQASIVLLSEAGTA 75

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
              +A +  K+    + +    +    +    +     ++ K  V V  +      A  +
Sbjct: 76  TTVLADMLTKSGTTFYGAASSDVGILSKFPIEETANLNSMIKAVVTVDGKQIAAYSAHLA 135

Query: 137 FSRAGNRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           ++             V   G+        + S    D          S          D 
Sbjct: 136 YTSYATYLPRGYGAGVPTPGEFSEFGWNKMPSGPVTDPETVQRVNVNSGRPLAISTFIDD 195

Query: 195 ITQKKESLVPFVIAGDFNRK--INYLGNNDDFW------------KTIDPNDSLIRFPKE 240
              ++      ++ GDFN    +++     + +            + +D    +  +  +
Sbjct: 196 AAAERARGRSVILGGDFNEPSALDWTDGTRNLFDHNGVVIPWESTRLLDQAGFVDAYRSK 255

Query: 241 KDSR-CNANKNL------------------RNKIPIDYFVMDQNAYKFLIQESF------ 275
             +   +                         +  IDY   D+ +   L           
Sbjct: 256 YPNPATHPGFTWPSDNPDVDTSQLTWAPEADERDRIDYIFADRASDLKLGSVGIIGPRKT 315

Query: 276 SEILYNEDDIKSRGKRLS------DHCPISIDYDF 304
                  ++        S      DH  +   Y F
Sbjct: 316 IVHNKRVEENSQDNFIASPTPWPTDHKAVLATYRF 350


>gi|83814898|ref|YP_445086.1| endonuclease/exonuclease/phosphatase family protein [Salinibacter
           ruber DSM 13855]
 gi|83756292|gb|ABC44405.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber DSM
           13855]
          Length = 439

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/246 (11%), Positives = 66/246 (26%), Gaps = 15/246 (6%)

Query: 19  SVAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQE 73
             A  +R+ +WN+       +   +   +      D       + +  + LDAD++ LQE
Sbjct: 78  PEADTIRVATWNLEHFVDGHDNPYIDAGTENTPAPDLKNRKRRVARALRRLDADLLVLQE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             S   +              T      S       ++  +  R     V   +  +   
Sbjct: 138 AESEAFLQSFVE----DRLGDTGYRFATSVESPTWYMNVVLLSRYPLGVVRNYADVVTPI 193

Query: 134 KDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
               +  G   A  L    +    + V    + +           +        Q ++L 
Sbjct: 194 VGQEADNGEPAAQSLTNHRLWTADVRVAPNRVWTLIGAHLKAGRSAADRGWRIGQIRFLH 253

Query: 193 DWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +++ ++       ++AGD N   +            +P+       +      +    
Sbjct: 254 AELSRLRDDRPAAKMLVAGDLNSLPDSPELRLLL---NNPDRPAPDSVQPGRVPGDIRFT 310

Query: 251 LRNKIP 256
                 
Sbjct: 311 DPLSDR 316


>gi|242219979|ref|XP_002475762.1| predicted protein [Postia placenta Mad-698-R]
 gi|220725034|gb|EED79041.1| predicted protein [Postia placenta Mad-698-R]
          Length = 415

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 78/308 (25%), Gaps = 50/308 (16%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL------LRQYAKNLDAD 67
           V     V    R+ +WNI  L+  +       +V       T        + Y +  DAD
Sbjct: 137 VSIPPRVPGTTRIATWNICGLAAAQKKVRVARAVHVHAGLLTAGVCAQGFKYYVEAEDAD 196

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ L E         V       +           K        +   +    V    Q 
Sbjct: 197 VLVLTETKPVPVSVLVDLGEEDLLELPGHPDPGSVKGRILTLEFSNYYLIGTYVVNAGQG 256

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
              L AK  ++    +   EL +         + V    L       +   T   +    
Sbjct: 257 LKTLEAKKEWNVHFTKYMRELDMRKPVIWTGDLNVAPTELDLANPKTNWNKTPGYTEVET 316

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           S  A+ L                        +    +D   +        +   ++    
Sbjct: 317 SAFARILN----------------------PSSAAASDAASQDDAAPGKFVDVWRKLHPD 354

Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                    +           +D FV+ +   + +        +Y            SDH
Sbjct: 355 DRHYTYFSYRFNCRMKGIGWRLDMFVVSERIEERVKMCEIRSEIY----------GASDH 404

Query: 296 CPISIDYD 303
           CP++++ +
Sbjct: 405 CPVALEIE 412


>gi|15900492|ref|NP_345096.1| hypothetical protein SP_0582 [Streptococcus pneumoniae TIGR4]
 gi|149005694|ref|ZP_01829433.1| hypothetical protein CGSSp18BS74_09015 [Streptococcus pneumoniae
           SP18-BS74]
 gi|168490528|ref|ZP_02714671.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae CDC0288-04]
 gi|307126786|ref|YP_003878817.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae 670-6B]
 gi|14972057|gb|AAK74736.1| hypothetical protein SP_0582 [Streptococcus pneumoniae TIGR4]
 gi|147762634|gb|EDK69594.1| hypothetical protein CGSSp18BS74_09015 [Streptococcus pneumoniae
           SP18-BS74]
 gi|183574895|gb|EDT95423.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae CDC0288-04]
 gi|306483848|gb|ADM90717.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae 670-6B]
          Length = 333

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNALPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|254465206|ref|ZP_05078617.1| endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium
           Y4I]
 gi|206686114|gb|EDZ46596.1| endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium
           Y4I]
          Length = 346

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 76/331 (22%), Gaps = 61/331 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-------- 75
           +R+ ++N   LS      L ++  + T        +       D++ LQ +         
Sbjct: 22  LRIATFNTE-LSRDGPGLLLRDIERGTDPQVAAAAEVITAARPDVLALQGIDWDFEGRAL 80

Query: 76  ---------------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                                    +    P +      +     N            A+
Sbjct: 81  AALAGLLAEQGLSFPYRVALRPNAGLPPPAPLDLDGDGRAGGPRDNQGYGRFRGQGGIAL 140

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA----------------------VELLVEI 152
             R        + +  L  ++       R                        +  +   
Sbjct: 141 LSRLPVSHEGIRDFSALLWRELPGALLPRHPDGRPFPSPEAQAVQRLSSTGHWLVPVELP 200

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +G+++ V+  H     F    +     +   +      L   +        PFVIAGD N
Sbjct: 201 DGRRLNVMTFHAAPPVFDGPEDRNGRRNHDEIRLWQLLLDGRLGPV--PEAPFVIAGDAN 258

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLI 271
                        +++  +  +                       +DY +    A    +
Sbjct: 259 LDPGQGEGRKQAIRSLLADPRVQDPQPHSPQGTATVAWQGAGQMRVDYVL---PAAGLTV 315

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             S        D         S H  + +D 
Sbjct: 316 AGSGIVWP---DGPDDAAAIASRHRLVWVDL 343


>gi|149175328|ref|ZP_01853950.1| Endonuclease/exonuclease/phosphatase [Planctomyces maris DSM 8797]
 gi|148845937|gb|EDL60278.1| Endonuclease/exonuclease/phosphatase [Planctomyces maris DSM 8797]
          Length = 181

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 46/195 (23%), Gaps = 39/195 (20%)

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
                 +  +   + Q    L            R A  ++++       +++ HL     
Sbjct: 15  GGYGNLILSRWRFLSQHQISLTNK-----WRKARGAQIVMIDSPEGTFQLVNFHLGL--- 66

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                     +      Q   L       + +  P VI GD N         D       
Sbjct: 67  ----------AEKERHWQINHLLTHRLFAEGNGYPSVIVGDTN---------DWRNTLAG 107

Query: 230 PNDSLIRFPKEKDSRCNANKNLRN--KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
              S   F +                   +D   +                 + +     
Sbjct: 108 GKFSEHEFQEVTQPPSRYRSFPAYMPVGTLDKAFIRGAITIK----------HAKVAKSK 157

Query: 288 RGKRLSDHCPISIDY 302
             K+ SDH P+ ID+
Sbjct: 158 LAKQASDHLPLVIDF 172


>gi|15608028|ref|NP_215403.1| hypothetical protein Rv0888 [Mycobacterium tuberculosis H37Rv]
 gi|31792076|ref|NP_854569.1| hypothetical protein Mb0912 [Mycobacterium bovis AF2122/97]
 gi|121636811|ref|YP_977034.1| hypothetical protein BCG_0940 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148660666|ref|YP_001282189.1| hypothetical protein MRA_0896 [Mycobacterium tuberculosis H37Ra]
 gi|224989282|ref|YP_002643969.1| hypothetical protein JTY_0910 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|254549865|ref|ZP_05140312.1| hypothetical protein Mtube_05286 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185784|ref|ZP_05763258.1| hypothetical protein MtubCP_07110 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199908|ref|ZP_05767399.1| hypothetical protein MtubT4_07190 [Mycobacterium tuberculosis T46]
 gi|289442300|ref|ZP_06432044.1| hypothetical exported protein [Mycobacterium tuberculosis T46]
 gi|289446455|ref|ZP_06436199.1| hypothetical exported protein [Mycobacterium tuberculosis CPHL_A]
 gi|289568855|ref|ZP_06449082.1| hypothetical exported protein [Mycobacterium tuberculosis T17]
 gi|289749410|ref|ZP_06508788.1| hypothetical exported protein [Mycobacterium tuberculosis T92]
 gi|289752943|ref|ZP_06512321.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|297633406|ref|ZP_06951186.1| hypothetical protein MtubK4_04756 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730391|ref|ZP_06959509.1| hypothetical protein MtubKR_04836 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524381|ref|ZP_07011790.1| hypothetical exported protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306806731|ref|ZP_07443399.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu007]
 gi|313657718|ref|ZP_07814598.1| hypothetical protein MtubKV_04826 [Mycobacterium tuberculosis KZN
           V2475]
 gi|54039991|sp|P64744|Y912_MYCBO RecName: Full=Uncharacterized protein Mb0912
 gi|54042479|sp|P64743|Y888_MYCTU RecName: Full=Uncharacterized protein Rv0888/MT0911
 gi|1314027|emb|CAA97395.1| PROBABLE EXPORTED PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31617664|emb|CAD93773.1| PROBABLE EXPORTED PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492458|emb|CAL70926.1| Probable exported protein [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148504818|gb|ABQ72627.1| hypothetical protein MRA_0896 [Mycobacterium tuberculosis H37Ra]
 gi|224772395|dbj|BAH25201.1| hypothetical protein JTY_0910 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|289415219|gb|EFD12459.1| hypothetical exported protein [Mycobacterium tuberculosis T46]
 gi|289419413|gb|EFD16614.1| hypothetical exported protein [Mycobacterium tuberculosis CPHL_A]
 gi|289542609|gb|EFD46257.1| hypothetical exported protein [Mycobacterium tuberculosis T17]
 gi|289689997|gb|EFD57426.1| hypothetical exported protein [Mycobacterium tuberculosis T92]
 gi|289693530|gb|EFD60959.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|298494175|gb|EFI29469.1| hypothetical exported protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308346748|gb|EFP35599.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu007]
          Length = 490

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 88/297 (29%), Gaps = 31/297 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           VF     T +++    ++++NI  L      ++           +   ++  K L+A  V
Sbjct: 211 VFVGNTPTDTISGDFSMLTYNIAGLPFPLSSAILP--------RFFYTKEIGKRLNAYYV 262

Query: 70  F-LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             +QE   +     +  K+        E                      K  R+ +Q++
Sbjct: 263 ANVQE--DFAYHQFLIKKSKMPSQTPPEPPTLLWPIGVPFSDGLNTLSEFKVQRLDRQTW 320

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               + +  +  G       +    G  + V ++H  +     +  N             
Sbjct: 321 YECTSDNCLTLKG--FTYSQMRLPGGDTVDVYNLHTNTGGGPTTNAN------------L 366

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             + ++I Q   +    ++ GDFN + +   +    +  ++         +   +     
Sbjct: 367 AQVANYIQQN-SAGRAVIVTGDFNARYSDDQSALLQFAQVNGLTDAWVQVEHGPTTPPFA 425

Query: 249 KNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      +D           L   S+           S+G+ LSDH P  + +
Sbjct: 426 PTCMVGNECELLDKIFYRSGQGVTLQAVSYGNEAPK--FFNSKGEPLSDHSPAVVGF 480


>gi|91075990|ref|XP_970704.1| PREDICTED: similar to synaptojanin [Tribolium castaneum]
 gi|270014666|gb|EFA11114.1| hypothetical protein TcasGA2_TC004712 [Tribolium castaneum]
          Length = 1108

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/332 (12%), Positives = 82/332 (24%), Gaps = 57/332 (17%)

Query: 23  KVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYT-----LLRQY-----AKNLDADI-- 68
            +R+   ++N+N       V      +     D        L         K++  DI  
Sbjct: 531 PIRIAVGTYNVNGGKHFRSVVFKDIKLSDWLLDPHIKNPGALVDTGYTDENKSIPVDIYA 590

Query: 69  VFLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKN 120
           +  +E+   NA   V        +W          +             +     VR ++
Sbjct: 591 IGFEEIVDLNAANIVNTSSENAKSWATELQKVLSRDRPYVLVTYQQLVGVCLYVFVRPEH 650

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V  ++               GN+ A  + +  +   +  +  H  +     S  N     
Sbjct: 651 VPYIRDVAVDSVKTGLGGHTGNKGAAAIRLVFHATSLCFVCAHFAAGQSQVSERNADYNE 710

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDF 224
            +        +   +++   S       GDFN +++                    ND  
Sbjct: 711 ITRK------ITFPMSRSLNSHEYLFWCGDFNYRVDMDKDEIKESVKLGDYDRILENDQL 764

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQ 272
            K     +    F + K +     K                    D  +  +      I 
Sbjct: 765 MKQQQEGNVFKDFTEGKITFPPTYKYDLFSDDYDTSEKCRAPAWTDRVLWRRRKQSLAIT 824

Query: 273 ESFSEILY-NEDDIKSRGKRLSDHCPISIDYD 303
               +              + SDH P+    D
Sbjct: 825 SQLEDSNPGKLVFYGRAELKQSDHRPVIAIID 856


>gi|50548171|ref|XP_501555.1| YALI0C07436p [Yarrowia lipolytica]
 gi|49647422|emb|CAG81858.1| YALI0C07436p [Yarrowia lipolytica]
          Length = 582

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/355 (9%), Positives = 79/355 (22%), Gaps = 98/355 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           +R V++NI  ++       W          +  +    K   AD++ LQE      +   
Sbjct: 1   MRFVTFNICGINNVLSYHPWNE-----QRSFEHMFAVLK---ADVICLQETKLQPHLLKR 52

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIA------------------VRKKNVR 122
           +      +  ++S +     +S           +                   +  + + 
Sbjct: 53  EHALVPGYDSYWSFSNTKKGYSGVAVYVKHGIKVLKAEEGLTGQLVSPDSKKGLTYQQLY 112

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV-LDIHLKSFCFLDSLENTYSPSC 181
             Q+           +           V+  G+ + + L   +    +  S         
Sbjct: 113 ERQRERDGSSKSCIGAYPEGNPQRLFQVDSEGRSLVLDLGFCVVFGLYCPSTATEGEERD 172

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------------- 226
           +        L++ +    E+    V+ GD N       + +                   
Sbjct: 173 AYRDDYFGLLEERVNLLVEAGREVVVMGDLNVARELYDSAEGMQALHKAKHITLPTLGDK 232

Query: 227 ------------------------------------TIDPNDSLIRFPKEKDSRCN---- 246
                                                +  +       +     C     
Sbjct: 233 EEGRFVEVFEKLNPGQCKSWREAKVGRRVFHRLVPDLLQDSCRNKHPNRPDMYTCWNVMM 292

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +       IDY +  +                 ED         SDHCP+  +
Sbjct: 293 NYRPGNFGSRIDYVLASKGLKV-------------EDADILPHLEGSDHCPVYAE 334


>gi|316967483|gb|EFV51900.1| protein angel [Trichinella spiralis]
          Length = 450

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/347 (10%), Positives = 81/347 (23%), Gaps = 76/347 (21%)

Query: 23  KVRLVSWNIN----TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           K R+ S+N+                +      ++ +  L    +++DAD+  LQE+   +
Sbjct: 108 KFRICSYNVLSQTIMERTMHLYRNCQPENLVWSNRWQRLSMEFESIDADLFCLQEVQDMH 167

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKD 135
                +       F        + +         AI  R     ++      Y +  +  
Sbjct: 168 -----YGNYFMQYFAEKGFDGLYKRCTGTKPDGCAIFWRLSKFSLVSHDAVDYHVPNSSL 222

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                G   ++ L      +++ V + HL   C    ++           Q         
Sbjct: 223 DRDNVGLIASLRLQDGDEKQRLVVANTHLLYNCARGDIKLGQLALLLAHLQLMA----GN 278

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---------- 245
               E   P ++ GD N        +      +            + S            
Sbjct: 279 GDGDEPFEPLLLCGDLNSTPQSPLISLLKQGKLRLERLHSGQVSGQGSPVIGPLLPRPLL 338

Query: 246 ----------------NANKNLRNKIPI-------------------------------- 257
                           +  ++      I                                
Sbjct: 339 PAHLNIYEPTCTFQQHHQRQHYGKPAVIGHRIPFKSSYKFPAGEASRWISFLSSCDSAMV 398

Query: 258 DYFVMDQNAYKFLIQESF--SEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+     +    +   S    + + +           SDH P+  D+
Sbjct: 399 DHIFYASSRLHCIRYSSLLSPDQVISSVGFLPNAYCGSDHLPVISDF 445


>gi|313903576|ref|ZP_07836966.1| Endonuclease/exonuclease/phosphatase [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466129|gb|EFR61653.1| Endonuclease/exonuclease/phosphatase [Thermaerobacter subterraneus
           DSM 13965]
          Length = 323

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 48/198 (24%), Gaps = 30/198 (15%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+ ++NI      +G             D   +R+  +        LQE+      +   
Sbjct: 52  RIATFNIRHGRGLDG-----------RVDLEGIRRVLERASPHWAGLQEVDGGRRRSGRV 100

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +  W           H            +      V         + A+   SR   R 
Sbjct: 101 HQARWLGMALGRAWFFHPTLH--RGGAYGLCWLGPPVPPAGSGVVAVEAQPLPSRWEPRA 158

Query: 145 AVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            + L V       +  W+   HL         +       +   +Q              
Sbjct: 159 CLWLRVSGFGPQDEPAWLGVTHLGLGAAERRAQARALAEQAARLRQ-------------- 204

Query: 202 LVPFVIAGDFNRKINYLG 219
             P V+ GDFN       
Sbjct: 205 EGPVVLVGDFNAPAEAPE 222


>gi|269128774|ref|YP_003302144.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
 gi|268313732|gb|ACZ00107.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
          Length = 238

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 67/282 (23%), Gaps = 52/282 (18%)

Query: 27  VSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVAK 82
            +WN+     +E  G         +       + ++       ++ LQE+       + +
Sbjct: 2   ATWNVLHRVHAENWGAEAIPKCWPKEPERIAAITEWLAGRTEQVIALQEVSGDQLADLRR 61

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P  T+                  +D         +++ ++          +SF     
Sbjct: 62  ALPGRTFHTLRYPRVPAPRQGSCPLSDPG-------EHLVLMVDGTSQFRGAESFGNDPG 114

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           +  + + V     +  V+  HL                      Q   L +         
Sbjct: 115 KGVLAVQV----AETLVIATHLS--------------GDRRRVPQLARLAELAAAH--PE 154

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P ++ GDFN              +       +            ++       +D+ V+
Sbjct: 155 RPVLLLGDFNTD-------RATVASGLGEGFTVAALPPGSPPTRLHRPHAETHTVDHVVV 207

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                               D        LSDH  +     F
Sbjct: 208 RDA--------------TIVDTAVESSDDLSDHNLVRAAISF 235


>gi|304315069|ref|YP_003850216.1| hypothetical protein MTBMA_c13150 [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588528|gb|ADL58903.1| conserved hypothetical protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 231

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 79/287 (27%), Gaps = 64/287 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++++++WN+N                R +     L  Y   L+ D  F QE+        
Sbjct: 2   ELKVLTWNLN----------------RASYRRRKLWSYMGELEFDAGFFQEV-------- 37

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                                  +       + + K  +    +   L  + +       
Sbjct: 38  -----------YMIPNEVRWNYHTFRGEMNTLLLHKDLMLDSMKRNYLEISDNHCIEDFY 86

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   +EI G  + +  I+                     S+    L ++I + ++  
Sbjct: 87  ---VSCRIEIGGNSLSLFSIYNYIGPADSD-----------FSEFLDLLYNYIEEGED-- 130

Query: 203 VPFVIAGDFNRKINYLGNNDDF------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
              +I GDFN   N+  +                        +E++           K  
Sbjct: 131 -LIIIGGDFNINKNFSPSLRRLALLAEEMTGRLSELGFRDVLREEEDPFTFMTPNGGKYQ 189

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           IDY  + +      +            +I     RLSDH P+ +  +
Sbjct: 190 IDYLFVPEGVKILDVWHP------PAGEIIETRPRLSDHIPLRVTLE 230


>gi|83595869|gb|ABC25231.1| catabolite repression control protein PA5332 [uncultured marine
           bacterium Ant4D3]
          Length = 257

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 78/306 (25%), Gaps = 78/306 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81
           +R+++ N+  L                 +    L  +    DAD+V LQ++    Y    
Sbjct: 1   MRVITLNVQGLR---------------QAAERGLFDWMVTQDADVVCLQDIREKDYQLDE 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +F    W +++       +      +                     + G   S     
Sbjct: 46  PLFHPEGWHVYFFDAFEDGYGGTAIYSRHQP--------------KAIMTGLGFSGCDFE 91

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      ++ + +KI +  I + S    D  ++  +              + + +    
Sbjct: 92  GRF-----IQADFEKISIASISVPSGLGDDDKQDAKNE-------FMDQFSNHLRKTLRK 139

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              F+  G  N                         D   +     +    F +   +  
Sbjct: 140 RRDFIFCGTINTAHKPEDLSGWYVNQKNSGFLPEERDVLDEIFFQLEFCDAFRQVNQNER 199

Query: 246 NANKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              +DY +   N  + +                 R +R S+H P
Sbjct: 200 QFTWWPDYNRAFKLNEGARLDYQITTPNLRRNVRNAGI-----------YREQRFSNHSP 248

Query: 298 ISIDYD 303
           + IDY 
Sbjct: 249 LIIDYT 254


>gi|221487002|gb|EEE25248.1| endonuclease/exonuclease/phosphatase domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1347

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 17/147 (11%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           V +++WN+        +        +         + +     + D+V LQE+ S +   
Sbjct: 833 VSVMTWNVLAELYGTLDAFPHCDPYMLAWPYRRQRILEEILAHNPDVVCLQEVQSEHFED 892

Query: 82  KVFPKNTWCIFYSTERLI---------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              P+     +  T +                        A   RK    ++ Q      
Sbjct: 893 FFLPELARYGYNGTYKQKTMEVFTSGSGKKSGGKFTMDGCATFYRKSKFTIVDQCGLEFS 952

Query: 133 ------AKDSFSRAGNRRAVELLVEIN 153
                 +++   R   R+AV  L++ N
Sbjct: 953 QLIKQASREQLPRQLQRQAVRRLLKDN 979



 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 41/192 (21%), Gaps = 58/192 (30%)

Query: 171  DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP------------FVIAGDFNRKINYL 218
            ++       S  +   QAQ L   I +   +  P             V+ GDFN   +  
Sbjct: 1154 NTHIVANPESNDVKIWQAQTLVGMIEKYLLAFRPPAYRDSPCLTPAVVLCGDFNSTPDSA 1213

Query: 219  ------------------GNNDDFWKTIDPN-------------------DSLIRFPKEK 241
                               +       ++                     D    +   +
Sbjct: 1214 VYQLLVTGRCDRHHIDLASDRHGLLAELNLGHSIPLKSGYAVSKALKDGLDPHDFYALRQ 1273

Query: 242  DSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDD--------IKSRGKRL 292
                  N        +DY            I E         +               R 
Sbjct: 1274 SEPEFTNYTGNYTGCLDYLFFCDTMLRVREILEPIDSKQLLREARQLQLLHQALPSPLRP 1333

Query: 293  SDHCPISIDYDF 304
            SDH P+   +++
Sbjct: 1334 SDHIPLLCKFEW 1345


>gi|237831705|ref|XP_002365150.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211962814|gb|EEA98009.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506685|gb|EEE32302.1| endonuclease/exonuclease/phosphatase domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1347

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 17/147 (11%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           V +++WN+        +        +         + +     + D+V LQE+ S +   
Sbjct: 833 VSVMTWNVLAELYGTLDAFPHCDPYMLAWPYRRQRILEEILAHNPDVVCLQEVQSEHFED 892

Query: 82  KVFPKNTWCIFYSTERLI---------NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              P+     +  T +                        A   RK    ++ Q      
Sbjct: 893 FFLPELARYGYNGTYKQKTMEVFTSGSGKKSGGKFTMDGCATFYRKSKFTIVDQCGLEFS 952

Query: 133 ------AKDSFSRAGNRRAVELLVEIN 153
                 +++   R   R+AV  L++ N
Sbjct: 953 QLIKQASREQLPRQLQRQAVRRLLKDN 979



 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 41/192 (21%), Gaps = 58/192 (30%)

Query: 171  DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP------------FVIAGDFNRKINYL 218
            ++       S  +   QAQ L   I +   +  P             V+ GDFN   +  
Sbjct: 1154 NTHIVANPESNDVKIWQAQTLVGMIEKYLLAFRPPAYRDSPCLTPAVVLCGDFNSTPDSA 1213

Query: 219  ------------------GNNDDFWKTIDPN-------------------DSLIRFPKEK 241
                               +       ++                     D    +   +
Sbjct: 1214 VYQLLVTGRCDRHHIDLASDRHGLLAELNLGHSIPLKSGYAVSKALKDGLDPHDFYALRQ 1273

Query: 242  DSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDD--------IKSRGKRL 292
                  N        +DY            I E         +               R 
Sbjct: 1274 SEPEFTNYTGNYTGCLDYLFFCDTMLRVREILEPIDSKQLLREARQLQLLHQALPSPLRP 1333

Query: 293  SDHCPISIDYDF 304
            SDH P+   +++
Sbjct: 1334 SDHIPLLCKFEW 1345


>gi|164654988|ref|XP_001728626.1| hypothetical protein MGL_4225 [Malassezia globosa CBS 7966]
 gi|159102507|gb|EDP41412.1| hypothetical protein MGL_4225 [Malassezia globosa CBS 7966]
          Length = 342

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 72/299 (24%), Gaps = 76/299 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+  WNI +L                +SD   L +Y    DAD++   E       +   
Sbjct: 69  RIAIWNITSL---------------KSSDAKGLMRYVHAEDADVLVFSETKVNETPSHAG 113

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               +                     +  IAV  K   +  +   L G  D  S A    
Sbjct: 114 LDAMYKY---------RYWGIGEKKGYAGIAVLSKQKPIHVEKG-LPGFHDPSSNARL-- 161

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + +      ++  +  +           +     L +  Q L         S   
Sbjct: 162 -----LTVEFPHTVLVATYAVNAGDGLKTLGNKNAWNEALEKHLQSL--------PSDKE 208

Query: 205 FVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            +  GD N   +                      D   + +  ND    + +        
Sbjct: 209 VIWCGDLNVVWDDRDLAGASKKWNKAAGYTQAECDAHRRILATNDMCDAWRECHPDAVGH 268

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                 +           ID F++ + A   +        +Y            SDH P
Sbjct: 269 YTYYGWRGQCRSRGAGWRIDSFIIRKRALSRVKACEIRHEIY----------GPSDHVP 317


>gi|325980885|ref|YP_004293287.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
 gi|325530404|gb|ADZ25125.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
          Length = 324

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 80/283 (28%), Gaps = 47/283 (16%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQE------MGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
                 + ++A+   AD++ LQE      + + N+   +  +                  
Sbjct: 57  EQRLKAVAEFAEKTPADVILLQEVVGGSLVHTENSAEDLQKELRARKRDYDLYTAFEIGL 116

Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR--AGNRRAVELLVEIN-GKKIWVLD 161
                +  AI  R +      +  P     +         R  +   + I    K+ + +
Sbjct: 117 PGVIGVANAILSRCEIDFRTTRRLPHATELNFRGHDIKLPRNVMMTRINIPHSSKLNIYN 176

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---ESLVPFVIAGDFNRKINYL 218
            HL + C  D            L  Q   +  +I++ +    S    ++ GDFN      
Sbjct: 177 THLCAACTADQ-----------LDAQLDIMLPFISELEASFPSNNFTILGGDFNIDRFRT 225

Query: 219 GN--NDDFWKTIDPNDSLIRFPKEKD----------------SRCNANKNLRNKIPIDYF 260
                  F+  I     +  + + +                    +      +   IDY 
Sbjct: 226 DPFVERPFYDRIVSAGFIDAYAQNRPLDNLFANPGQADMHCTVGVSTLDAGGSARRIDYI 285

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            M+        +  F+ ++  +         +SDH  + +   
Sbjct: 286 FMNTEKRLRESRVVFNTLVDPDQTS------VSDHAGVFVSVT 322


>gi|254453086|ref|ZP_05066523.1| endonuclease/exonuclease/phosphatase [Octadecabacter antarcticus
           238]
 gi|198267492|gb|EDY91762.1| endonuclease/exonuclease/phosphatase [Octadecabacter antarcticus
           238]
          Length = 404

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/387 (12%), Positives = 98/387 (25%), Gaps = 115/387 (29%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + S+N+  L   + V     S   + +      + +    +DADIV  QE+   +A+ 
Sbjct: 4   FTIASFNVKNLIGADKVYYKFQSYTPEESAWKQDWMAEQLLTMDADIVGFQEIFEQDALR 63

Query: 82  KV----------------------------FPKNTWCIFYST--ERLINHSKRDSNNDIH 111
            V                            F K  +  + +T      N +         
Sbjct: 64  DVIAHADSLGQTSNDAAIPDPSQRYHRKAIFRKLAYTPYGTTGLAFAPNSADTGEAGQRR 123

Query: 112 TAIAVRKKNVRV----------LQQSYPLLGAKDSFS---------RAGNRRAVELLVEI 152
             +A+  +   V               P    + + +         R  +R  ++  + +
Sbjct: 124 PGVAIVSRFGFVGMPEIIQDLPEPVDIPFSALRGADNPDDAGHYRLRRLSRPILKARIPV 183

Query: 153 NGKKIWVLDIHLKSFCFLD--------------------SLENTYSPSCSLLSQQAQWLK 192
           +G+ I V + HLKS                         +      P+      +A  L+
Sbjct: 184 DGQTITVFNCHLKSKLGEHVTPAGAEFSPASDLTNYDPVARALGSLPAALRRMAEAWVLR 243

Query: 193 DWITQKKESLVPFVIAGDFNRKIN---------YLGNNDDFWKTIDPNDSLI-------- 235
             I  + ++  P ++ GDFN   +              +  W       +          
Sbjct: 244 REIIAELDAGNPVMVRGDFNDGEHAVSSEIISGETPFKNYAWMLRHDAKTSRDRYSDAQN 303

Query: 236 ------------------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                                K        +        ID   M ++ +     +    
Sbjct: 304 EQITEDINRVRLHSAEKMFVRKSARDMVYTSAFGGTFESIDQIYMSRHFHPDYANKIGEM 363

Query: 278 ILYNEDDIK---------SRGKRLSDH 295
             ++  +              K  SDH
Sbjct: 364 EYFSVLNDHLTDGSHPEAPYNKLASDH 390


>gi|218661214|ref|ZP_03517144.1| Endonuclease/exonuclease/phosphatase [Rhizobium etli IE4771]
          Length = 240

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 50/224 (22%), Gaps = 28/224 (12%)

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-----VRKKNVRVLQQSYPLLGAKDSFS 138
                   F+           D        +A           + +   +    A     
Sbjct: 39  AALPGHDGFFCPTSRGALFDGDVAIVAEFGLATFVRKSHSVIAQAIDFVHGSFSAGGWGE 98

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R A  + +  +     +   H+         +           +QA  L   I + 
Sbjct: 99  HPRPRNAHCIRLFSHANASAMTIAHMH-----GLRDPAGKGDTPAREEQALALAGLIERL 153

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                  V+ GDFN   +        +K + P                 +  L+     D
Sbjct: 154 WPGDEGLVVCGDFNVLPDS-----ATFKILAPLGLSDLVTGNGLVDTRTSYYLKQGRFAD 208

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Y ++                 +           +SDH  + +D 
Sbjct: 209 YMLVTPE---------VKIAKFEVVASPE----VSDHRALLLDI 239


>gi|220921927|ref|YP_002497228.1| endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS
           2060]
 gi|219946533|gb|ACL56925.1| Endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS
           2060]
          Length = 1016

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/397 (10%), Positives = 95/397 (23%), Gaps = 111/397 (27%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             ++   ++R+ ++N  +L+      L  +           + +  +    DIV + E  
Sbjct: 2   AASAAPDRLRVATFN-ASLNRAAEGRLITDLGTPDNPQARTVAEIIQRSAPDIVLINEFD 60

Query: 76  SYN-------AVAKVFPKNT------------WCIFYS---------------------- 94
             N         A +F +N             +   +                       
Sbjct: 61  YDNRGPNGSSLAADLFRRNYLSVGQNGQVGIDYPYVFVAPSNTGLASGFDLNNDGRTVST 120

Query: 95  --TERLINHSKRDSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGN 142
                  + S           +A+  +              L +  P     D  +    
Sbjct: 121 PGGRGYGDDSFGFGEFPGQYGMALFSRYPIDAASARTFQNFLWKDMPGARLPDDAATPAP 180

Query: 143 RRAV----------------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
           +                   ++ V ++GK I +L  H     F    +     +   +  
Sbjct: 181 QDFYSPEELAVFRLSSKSHWDVPVTVDGKTIHILAAHPTPPTFDGPEDRNGLRNADEIRF 240

Query: 187 QAQWLK----DWI------TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            A +++    D+I          ++   FVI GD N       +     + +     +  
Sbjct: 241 LADYVQPGRGDYIVDDRGRRGGLKAGERFVIVGDMNADPFDGDSVGQAARQLLDAPLVDA 300

Query: 237 FPKEK----------DSRCNANKNLRNKI-------------PIDYFVMDQNAYKFLIQE 273
                              N+ +    +               +DY +   N    +   
Sbjct: 301 SVTPASLGGPEQAALQGGANSRQAGDPRFDTADFADTAPGNLRVDYVLPSLNGLDPVAGR 360

Query: 274 SFSEILYNEDDIKSRGKRL--------SDHCPISIDY 302
            F     +                   SDH  +++D 
Sbjct: 361 VFWPRSSDPTFPLVGTYTPSLPGGFPSSDHRLVAMDL 397


>gi|296231416|ref|XP_002761141.1| PREDICTED: sphingomyelin phosphodiesterase 3 isoform 1 [Callithrix
           jacchus]
          Length = 647

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 82/293 (27%), Gaps = 65/293 (22%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKDQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNN--------- 221
           +   Q   L+DW+   ++S                V+ GDFN       +          
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFT 530

Query: 222 ---------------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251
                                      D+  K ++  +    +     S+ +  K     
Sbjct: 531 HYRDPCRLGPGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSSGQKGRKEL 590

Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              N   IDY +  +       +    E  +           L+DH P+++  
Sbjct: 591 LKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVAMRL 638


>gi|225854118|ref|YP_002735630.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae JJA]
 gi|225722251|gb|ACO18104.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae JJA]
          Length = 333

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNVLPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|149002261|ref|ZP_01827203.1| hypothetical protein CGSSp14BS69_01429 [Streptococcus pneumoniae
           SP14-BS69]
 gi|225856288|ref|YP_002737799.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae P1031]
 gi|237650145|ref|ZP_04524397.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae CCRI 1974]
 gi|147759576|gb|EDK66567.1| hypothetical protein CGSSp14BS69_01429 [Streptococcus pneumoniae
           SP14-BS69]
 gi|225724449|gb|ACO20301.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae P1031]
          Length = 333

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNVLPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|255085722|ref|XP_002505292.1| predicted protein [Micromonas sp. RCC299]
 gi|226520561|gb|ACO66550.1| predicted protein [Micromonas sp. RCC299]
          Length = 337

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/340 (12%), Positives = 86/340 (25%), Gaps = 61/340 (17%)

Query: 18  ASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQE 73
           AS     R+V++N+ +  L E +  +    +     +    L    +   A   ++ LQE
Sbjct: 2   ASSTHDARVVTYNVLSSSLCEPDYFAHCDPNDLHPPNRLAKLLAKLEPEMAKGAVIGLQE 61

Query: 74  MGSYNA--VAKVFPKNTWCIFYSTERLINHSK----------------RDSNNDIHTAIA 115
           +    A  +   F K  + +  S      +                   D +    T   
Sbjct: 62  VSQKWAGELHVFFAKRGYHMICSLYGKPFNGYMGIALAVPLAKYDVSKVDISRCSDTKKL 121

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL----- 170
            R+    +LQ+                R          G+   ++   L+          
Sbjct: 122 PREPKPGLLQKVINYPINLYRKVSGE-RAPQSDWQLAKGRFNTIMYASLQCKKSGAKFGV 180

Query: 171 ---DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                     +P    +  Q   +     Q++   +P ++ GDFN K    G +     T
Sbjct: 181 ANYHMPCMFRNPKVMTIHSQLAAM---YAQQQSGNLPVILMGDFNLKPGDGGYDLITTGT 237

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIP-------------------------IDYFVM 262
           +  +      P   +    + K                                +DY  +
Sbjct: 238 LASDHEAAPVPPAGEEWSTSLKYPMRSAYKVANGAEPDFTNFAQIKDDPQFIDTLDYIFI 297

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   + +                   SDH  ++   
Sbjct: 298 SPKIEVAEVLQLPHRSEVKGPFPAPDE--PSDHILLAATL 335


>gi|332231961|ref|XP_003265166.1| PREDICTED: protein angel homolog 2 isoform 1 [Nomascus leucogenys]
          Length = 544

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 166 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 225

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +       D   
Sbjct: 226 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISL 280

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      + C  ++          +   Q   L   I+  
Sbjct: 281 LDRDNVGLVLLLQPK-----IPYAASPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 335

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 336 AHQKDGSFCPIVMCGDFNSVPGSPLY 361


>gi|242051080|ref|XP_002463284.1| hypothetical protein SORBIDRAFT_02g041190 [Sorghum bicolor]
 gi|241926661|gb|EER99805.1| hypothetical protein SORBIDRAFT_02g041190 [Sorghum bicolor]
          Length = 451

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/286 (9%), Positives = 72/286 (25%), Gaps = 45/286 (15%)

Query: 33  TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKN 87
             S +        +          + +  +   ADI+ LQ + +        ++++    
Sbjct: 160 GGSTKRQQQQPVPASSAPRPRRWSVEEVLREAGADIIGLQNVRAEEERGMRPLSELAEGL 219

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
                ++      +             AV  +      +++ +    D       R  + 
Sbjct: 220 GMRYVFAESWAPEY-----------GNAVLSRWPIKRWKAHRVADQSDF------RNVLR 262

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKKESLV 203
             +E+       ++ H      LD           + S           + +     S  
Sbjct: 263 ATIEVPDAG--EVNFHCTHLDHLDERWRMKQVDAIIRSGDGPHILAGGLNALDGTDYSAD 320

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD--------SRCNANKNLRNKI 255
            +     +  +I       +  + +     +       +           N     +   
Sbjct: 321 RWADIVKYYEEIGKPTPKVEVMQYLKAKQYVDAKDFAGECEAVVVVAKGQNVQGTCKYGT 380

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +DY +   N+    +  S++ +              SDH  + +D
Sbjct: 381 RVDYILASPNSSYKFVPGSYTVVSSKGT---------SDHHIVRVD 417


>gi|182683518|ref|YP_001835265.1| hypothetical protein SPCG_0548 [Streptococcus pneumoniae CGSP14]
 gi|303253912|ref|ZP_07340033.1| hypothetical protein CGSSpBS455_00456 [Streptococcus pneumoniae
           BS455]
 gi|303260077|ref|ZP_07346050.1| hypothetical protein CGSSp9vBS293_01315 [Streptococcus pneumoniae
           SP-BS293]
 gi|303261261|ref|ZP_07347209.1| hypothetical protein CGSSp14BS292_07980 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303265917|ref|ZP_07351813.1| hypothetical protein CGSSpBS457_00610 [Streptococcus pneumoniae
           BS457]
 gi|303268299|ref|ZP_07354096.1| hypothetical protein CGSSpBS458_02224 [Streptococcus pneumoniae
           BS458]
 gi|182628852|gb|ACB89800.1| hypothetical protein SPCG_0548 [Streptococcus pneumoniae CGSP14]
 gi|301801456|emb|CBW34148.1| putative integral membrane protein (possible nuclease activity)
           [Streptococcus pneumoniae INV200]
 gi|302599088|gb|EFL66113.1| hypothetical protein CGSSpBS455_00456 [Streptococcus pneumoniae
           BS455]
 gi|302637395|gb|EFL67882.1| hypothetical protein CGSSp14BS292_07980 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638772|gb|EFL69234.1| hypothetical protein CGSSpBS293_01315 [Streptococcus pneumoniae
           SP-BS293]
 gi|302642137|gb|EFL72487.1| hypothetical protein CGSSpBS458_02224 [Streptococcus pneumoniae
           BS458]
 gi|302644501|gb|EFL74752.1| hypothetical protein CGSSpBS457_00610 [Streptococcus pneumoniae
           BS457]
          Length = 333

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 89/291 (30%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA       ++++SY     
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA---PVTVIVKKSYGFYTE 193

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++F     R    +L         ++ +H                   L+    Q L  
Sbjct: 194 AETFHT--TRFGTIVLHSRKQDIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNALPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|153005947|ref|YP_001380272.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
 gi|152029520|gb|ABS27288.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
          Length = 387

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 51/167 (30%), Gaps = 24/167 (14%)

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    + V+  G+    L+ HL++F              ++   QA  L D +   + S 
Sbjct: 230 RGWTGVDVKYEGEWFRFLNTHLEAFVP------------AVRLAQAGELVDLV---EASP 274

Query: 203 VPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRFPKEKDSRC-NANKNLRNKIPI 257
           +P V  GDFN +       +         ++       +    +        +      I
Sbjct: 275 LPVVAVGDFNAQPGSAPYVELTSVLADAWVESGAEGPGYTCCSNDPLLRDTASPPFDERI 334

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           D  +         +    + +     D+ + G   SDH  +     +
Sbjct: 335 DLVLFTPPF----VALDATVVGDEPADLTATGMWPSDHAGVVAKLRY 377


>gi|315039637|ref|XP_003169194.1| inositol phosphosphingolipids phospholipase C [Arthroderma gypseum
           CBS 118893]
 gi|311337615|gb|EFQ96817.1| inositol phosphosphingolipids phospholipase C [Arthroderma gypseum
           CBS 118893]
          Length = 526

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/349 (11%), Positives = 73/349 (20%), Gaps = 83/349 (23%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              K+ ++S+N   L       + +   +R       L     +   +IV LQE  +   
Sbjct: 10  SPHKINIISFNCWGL-----KYISQFRRERLLEIGKRLAN--ADFPPEIVGLQECWTQED 62

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAK 134
              +  +    + Y                    +A+  K        +         A 
Sbjct: 63  YNAIRNETRHILPYGKFYHSGIFGG--------GLAILSKWPIEESSMFQYPLNGRPTAF 114

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   +      + I      V  +           E   S  C   + QA  +   
Sbjct: 115 FRGDWFVGKGVAYARIRIGPGSKDVAAVFCTHLHAPYEREPHDSYIC-HRTAQAWEIAKL 173

Query: 195 ITQKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDPN--------------- 231
           +    E     +  GDFN                  D W+ + P                
Sbjct: 174 MRGAAERGHLVIGLGDFNMLPLSFAHRLITAHAPVTDVWRYLRPESSIGAAIDDVEIARN 233

Query: 232 ------DSLIRFPKEKDSRCNANKNLR----------------------NKIPIDYFVMD 263
                 D  I                                           +DY  + 
Sbjct: 234 KPIPSADFNILENGATCDGAFNTWRWSKTDQKRLAREGHISVDGSLPDPYAKRLDYIFVG 293

Query: 264 QNAY-----KFLIQESFSEILYNEDDIKSRGKRL------SDHCPISID 301
             +Y       +   S  +   +   +    +        SDH  +   
Sbjct: 294 NGSYLNHTDNAVPSSSSWKWNIHSARVGMMERHPTLHCSLSDHFSVEAT 342


>gi|147842050|emb|CAN75859.1| hypothetical protein VITISV_014707 [Vitis vinifera]
          Length = 1407

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN   +    N           F + ID    +    +  D   +   N R
Sbjct: 534 EEPWCVGGDFNVIRSQNERNRQGRISAAMRKFAQVIDELGLIDLPLQGGDYTWSGGPNNR 593

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F++           S     ++    K   +  SDH P+ ++
Sbjct: 594 YWARLDRFLVT----------SCWIDQFSSVIQKRLSRPASDHFPVVLE 632


>gi|124504779|ref|XP_001351132.1| AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase),
           putative [Plasmodium falciparum 3D7]
 gi|15375379|emb|CAB39006.2| AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase),
           putative [Plasmodium falciparum 3D7]
          Length = 617

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/359 (9%), Positives = 87/359 (24%), Gaps = 110/359 (30%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---------- 75
           +V+WN+N+++ +           +    +     +  NL+AD++  QE+           
Sbjct: 280 IVTWNMNSITVRY----------KNKKKWDEFMNFFNNLNADVLCFQEVRLPAMNLSEPC 329

Query: 76  -------------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--I 114
                                +    +          + +    ++     N  ++   +
Sbjct: 330 DNKNKNKNKNDGIRDRGKIKNSDQKSLADYEIMEQILNDDFKDYNAYFSLANIKYSGQLV 389

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            V+K       +                R     ++ +     ++L  +  +  F     
Sbjct: 390 LVKKNIHIESIRYNLFFENNAHIHHDEGR-----VILVEFSNFFLLSTYTPNNGFDHVKF 444

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------------- 219
                    L +    L++      E   P V  GD N     +                
Sbjct: 445 ERRRLFDEQLQKFVTILRN------EKQKPLVWTGDLNIAPEDIDLSHPAEFRRMKKGNV 498

Query: 220 -------------NNDDFWKTIDPNDSLIRFP----------------KEKDSRCNANKN 250
                           +F K +   + +  +                    +   N    
Sbjct: 499 PKEFIGQPGCTDFERKNFQKILTAGNLVDSYRYLQNIKLNEDKKNNIKHTPNINDNIYTW 558

Query: 251 L---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                        + ID+F++ +     + +            +       SDHCP+ +
Sbjct: 559 RCPFLLGKSCNKAMRIDHFIVSKEFLNRINKIHIQGFS-----VFHNNFYGSDHCPVIL 612


>gi|58581232|ref|YP_200248.1| hypothetical protein XOO1609 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58425826|gb|AAW74863.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 420

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/379 (11%), Positives = 89/379 (23%), Gaps = 103/379 (27%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             A  +R+ ++N +  S++ G  + +       +    +    + +  D+V L E   ++
Sbjct: 45  PAAATLRIATYNTSLYSDEAGGLIRELQGDSVHAR--KIAAVLQRVRPDLVLLNEF-DFD 101

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNND----------------------------- 109
              +             +     + R                                  
Sbjct: 102 PEHRAADLFQQRYLLVAQPGGGEALRYPYRYLAPVNTGVPSGLDLDNNGSIGGEGRARGN 161

Query: 110 ---------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------AVEL 148
                        + V  +    +Q        K S      R             A+  
Sbjct: 162 DAWGYGLHPGQYGMLVLSRYPIDVQAVRSFQLLKWSALPGALRPIDPASKTSYYSNAIWA 221

Query: 149 LVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----- 191
            + ++ K             +  L  H     F  + +   + +   L     +L     
Sbjct: 222 QLRLSSKSHWDVPVRTPLGVVHALVSHPTPPVFDGAEKRNAARNHDELQLWRAYLDNAPE 281

Query: 192 -KDWITQKK------ESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            + W+   K      +S   FVI GD N    +  G +      I+    L       + 
Sbjct: 282 SQRWLCDDKGNCGGLDSDARFVILGDLNNDPVDGAGRHAAIRALINHPRVLQYPTPRSEG 341

Query: 244 R---------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                                           + +DY +        +    F       
Sbjct: 342 GPEKTAEYAALGIAHSGDPHQVTGDFGPQAGTMRLDYVLPSHQFT-LIGSGIFWPASSAP 400

Query: 283 DDIKSRGKRLSDHCPISID 301
           +   + G   SDH  + +D
Sbjct: 401 EAAIADG---SDHHAVWVD 416


>gi|254516299|ref|ZP_05128358.1| hypothetical protein NOR53_2597 [gamma proteobacterium NOR5-3]
 gi|219674722|gb|EED31089.1| hypothetical protein NOR53_2597 [gamma proteobacterium NOR5-3]
          Length = 277

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 82/283 (28%), Gaps = 60/283 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + ++R+V+WN++  S+ +      +    T  +             D++  QE       
Sbjct: 54  SSEIRIVNWNLHKGSDPDWS---DDLSMFTKEN-------------DLMIFQEAALEMDA 97

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++   + +  F    R    + R +     +A     K   +  + +         +  
Sbjct: 98  WEIVAPDHYRSFAPGYRTRGPAGRVTGVMTLSAAEPLTKCSLLSIEPWLRSPKATMITEY 157

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G        +    + + V++IH  +F   ++                + +   ++    
Sbjct: 158 G--------LTDTDQSLLVVNIHAINFTIRNTDFR-------------EQIGRALSVASV 196

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P +++GDFN             + +     L     + D R            +D+ 
Sbjct: 197 HSGPILLSGDFNTWH---WGQRKMLREMATKHGLTMLTYDADHRVRV-----FGQALDHI 248

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +     + +   S                  SDH P++    
Sbjct: 249 YVRG--LRVIDATSIRVES-------------SDHNPMTATLS 276


>gi|157875900|ref|XP_001686320.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68129394|emb|CAJ07935.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 705

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 68/260 (26%), Gaps = 43/260 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMGS 76
            R+V++NI         S         T D          + Q       DIV LQE G 
Sbjct: 285 FRVVTYNILYDDFCTSKSSKAKIYPFATDDILDLGNRKVRIVQELLAYHMDIVCLQECG- 343

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--- 133
                 VF      +  +      +  +  +         R+   +++Q +   L     
Sbjct: 344 ----RDVFQSYFLPVMRACGYDGVYCNKSGSVKEGCGFLFRESRFQLVQHASVPLNFQTL 399

Query: 134 --------KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                       +    + A+  +  I  + +       K     ++    ++ +C +  
Sbjct: 400 STMFPELAGRVGACPELKEALSAVTSIGARVVLRESTSGKEIVVGNTHLFYHANACHIRV 459

Query: 186 QQAQWLKDWITQ--------------------KKESLVPFVIAGDFNRKINYLGNNDDFW 225
            QA  L  W+                      +     P V+ GDFN             
Sbjct: 460 LQAYMLLHWLNDATLISPGGDAATSPSPSLADRARPRRPLVMCGDFNCTHPTGAYRLLTT 519

Query: 226 KTIDPNDSLIRFPKEKDSRC 245
             ++ +       K     C
Sbjct: 520 GQVEADHPSWDKGKLFRWGC 539



 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             N  L  +  IDY    +++ + L      SE    E+      K  SDH  +  D  F
Sbjct: 643 WTNFTLTFREVIDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADLAF 702


>gi|55741922|ref|NP_001006804.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Xenopus
           (Silurana) tropicalis]
 gi|49903339|gb|AAH76676.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Xenopus
           (Silurana) tropicalis]
          Length = 517

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 78/343 (22%), Gaps = 104/343 (30%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VSWNIN +                      L++   +LDADI+ LQE         +
Sbjct: 1   MKIVSWNINGIRATRVG----------------LKETLDSLDADIICLQE---TKVTRDL 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY--------------- 128
             + +  +            R   +    A   +        +                 
Sbjct: 42  LDEPSAIVEGYNSYFSFSRGRSGYSG--VATFCKSSTTPWAAEEGLSGMLCNHTGSIGCY 99

Query: 129 ----PLLGAKDSFSRAGNRRAV----ELLVEINGKKIWVLDIHLK-SFCFLDSLENTYSP 179
                 L  +        R  +        E   + + V++++   +       +     
Sbjct: 100 GNTEEFLEEELQSLDQEGRAVLTQHRIRNCEGKEETLTVINVYCPRADPEKPERKTYKLR 159

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNNDDFW 225
              LL  +A+ +              +I GD N                           
Sbjct: 160 FYRLLQTRAEAILQ-------KGGHVIILGDVNTSHRPLDHCDPTDLETFEENPGRQWLN 212

Query: 226 KTIDP-------------------NDSLIRFPKEKDSRCNANKNL---------RNKIPI 257
           + +                           F     ++ NA                  I
Sbjct: 213 QFLGDPVPSQKGDSETGTPPSGGSGRFYDSFRYFHPTQRNAFTCWCSASGARQTNYGTRI 272

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           DY + +    +    +S                  SDHCP+  
Sbjct: 273 DYILGNSELVEREFLDSI----------IMPEVEGSDHCPVKA 305


>gi|221194501|ref|ZP_03567558.1| endonuclease/exonuclease/phosphatase family protein [Atopobium
           rimae ATCC 49626]
 gi|221185405|gb|EEE17795.1| endonuclease/exonuclease/phosphatase family protein [Atopobium
           rimae ATCC 49626]
          Length = 377

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 76/293 (25%), Gaps = 39/293 (13%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
            E        +  K T      +         D +  QE+   +   + +  N      S
Sbjct: 94  GEHGRAVSKDSVEKCTEGALGTIASLNNGTAPDFMLFQEVDRNS--DRSYHVNQVQETES 151

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA---VELLVE 151
                      + +    A  + + +  V      L     + S   +            
Sbjct: 152 KFPQDASYFAQNFHTGFLAYPIPEFHGSVDAGLMTLSNVTAAKSTRRSYPVDQSFFAKFF 211

Query: 152 INGKKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
              +   +             ++S  + Y    ++ ++Q   L++ +TQ++      +  
Sbjct: 212 DLDRCFMITRYPTSDGHELVLINSHMSAYDAGGTMRAKQLAMLREVLTQERAKGNYVIAG 271

Query: 209 GDFNRK--------INYLGNNDDFWKTIDPN----------DSLIRFPKEKDSRCNANKN 250
           GD+N           +     D   +  D +          D+L   P  +       K 
Sbjct: 272 GDWNHALAGSLSLYPSDQQVPDWVAELKDSDLPEGFSVVKADNLADVPSCRGDDIPYTKG 331

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +D +++  N                       G   SDH P+ + + 
Sbjct: 332 HTYTTTVDGWIVSDNVKARAEN-------------IDTGFAYSDHNPVLLRFT 371


>gi|321449469|gb|EFX61903.1| hypothetical protein DAPPUDRAFT_302699 [Daphnia pulex]
          Length = 460

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 66/223 (29%), Gaps = 23/223 (10%)

Query: 17  TASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFLQ 72
             + + K  ++S+N+   + L E   +    +       S    + +  ++  AD++ LQ
Sbjct: 76  PPAQSLKFTVLSYNVLAQHLLEEHTYLYRKADPEALDWNSRAERILREVRDNQADVLCLQ 135

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ S +      PK T   F          KR  +     AI  R     +         
Sbjct: 136 EVQSDHYETFYVPKLTAMGF-----TGVFKKRTGDKPDGCAIFFRDSKFELKNSISVEYC 190

Query: 133 AKDSFSRAGNRRAVELLVEIN--------GKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             D      +   +  L+            + +  + +      +     +       LL
Sbjct: 191 KPDVELLDRDNIGLIALLTPRILHSRNSADEDLPFIVVATTHLLYNPRRHDIKLAQLQLL 250

Query: 185 SQQAQWLKDWITQKKESL------VPFVIAGDFNRKINYLGNN 221
             +   +    ++            P ++ GDFN   N    +
Sbjct: 251 FAELDLIAFNSSKATSKNNNGISYHPTILTGDFNLTPNTSIYD 293


>gi|320160210|ref|YP_004173434.1| hypothetical protein ANT_08000 [Anaerolinea thermophila UNI-1]
 gi|319994063|dbj|BAJ62834.1| hypothetical protein ANT_08000 [Anaerolinea thermophila UNI-1]
          Length = 242

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 71/292 (24%), Gaps = 72/292 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++LV+WN                       Y  L      L  D+  +QE  S   ++  
Sbjct: 1   MKLVTWNCQGAF---------------RRKYPALA----ALQPDLAVVQECESLERISWK 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   F+  E           +   T+  V++     +  + P              
Sbjct: 42  QGNAPTHTFWYGE--KPTRGVGIFSWTQTSFRVKEGFDTSIHYAIP-------------- 85

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + VE       V+ +              ++      S QA        +   S  
Sbjct: 86  ----VEVEAPI-PFHVIAVWTM----------KHADWRLAYSGQAYRALGVYREFILSAD 130

Query: 204 PFVIAGDFNRKINYLGNND--------DFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNK 254
             ++ GDFN                      T+    +      EK     +       K
Sbjct: 131 TVIL-GDFNSNQRTAPRGRVGSHAVLAANLHTLGLISAYHFATGEKSGNETHPTFFHGRK 189

Query: 255 ----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 IDY  +     + L                      SDHCP+ +++
Sbjct: 190 TEQAGHIDYVFIPSRWIRRLKSVQVGN--------PGEWLAYSDHCPVMVEF 233


>gi|34392583|dbj|BAC82624.1| pol-like protein [Ciona intestinalis]
          Length = 1239

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/295 (11%), Positives = 75/295 (25%), Gaps = 48/295 (16%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           L+  L     +    V   ++N+  L              R       + +Y +N    I
Sbjct: 5   LILVLENFNNNFPMTVNFATFNVAGL--------------RNDKKRKTIFRYLQNKRYWI 50

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           +FLQE        K++                     +  +    +A+        +   
Sbjct: 51  LFLQETHCSREKQKLWE----------MEWQGEILWANGTNNSRGVAILFNKRLSYEVLN 100

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                   +        +   ++ING  + + +I+  +       E+ +          A
Sbjct: 101 HAADPIGRW--------LMATIKINGTILTITNIYGPNRDEPQFFEDLFQKLLITQYTGA 152

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +           +   I    N+  + +   +     +     L              
Sbjct: 153 TIIGGDFNVTINPALDRNIPTLRNKNSHRVLTTNMTAHNLSD--PLRFNNPGLKVFTRIQ 210

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            N      IDYF++ +     L   S    +             SDHC     ++
Sbjct: 211 NNPYAASRIDYFLVSKLVLSKLRAASIVPGVK------------SDHC--VATFE 251


>gi|148260431|ref|YP_001234558.1| endonuclease/exonuclease/phosphatase [Acidiphilium cryptum JF-5]
 gi|326403624|ref|YP_004283706.1| hypothetical protein ACMV_14770 [Acidiphilium multivorum AIU301]
 gi|146402112|gb|ABQ30639.1| Endonuclease/exonuclease/phosphatase [Acidiphilium cryptum JF-5]
 gi|325050486|dbj|BAJ80824.1| hypothetical protein ACMV_14770 [Acidiphilium multivorum AIU301]
          Length = 204

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 76/279 (27%), Gaps = 82/279 (29%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL+SWN+               ++R  ++   +    ++   D++ +QE          
Sbjct: 1   MRLISWNL---------------LRRVGAEAREVAALIEDYRPDLMLMQEA--------- 36

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               T  I   T+       R         +AV          +  L  +     R   R
Sbjct: 37  ----TESIAQVTDLCGGWFYRAPMQGRIYGLAVWSPAPLAEPGTVRLPASVMP-GRVPPR 91

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+ +      + I   ++HL     L+               Q + +   I        
Sbjct: 92  LALLVEA----QGITFANVHLSHGQMLN-------------RLQLRHIARQIDG------ 128

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P VI GD+N               I         P++   R            +D  ++ 
Sbjct: 129 PAVIVGDYNAVG-----------PIRLRGYRDVGPRQTTCRAGEMV----PFRLDRCMVR 173

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 L       +          G+  SDH PI +  
Sbjct: 174 D-----LHAHEARVL----------GRGSSDHHPIVVTL 197


>gi|325003619|ref|ZP_08124731.1| endonuclease/exonuclease/phosphatase [Pseudonocardia sp. P1]
          Length = 340

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 69/293 (23%), Gaps = 68/293 (23%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
                 +    +++++ N+                    +D   L     + D DIV + 
Sbjct: 110 ASATPPAGGSTLKVLALNVY----------------EGEADAGSLAALIDDEDPDIVSIP 153

Query: 73  EMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E G      +  +     + +  S             +     +A+ ++   V  ++   
Sbjct: 154 EAGGRYKQQLEPLLEPMGYRLESSVSPRR-------ADVTGNTVAIAERLGDVRTRAGDD 206

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           +           R            ++  +  H  +                    Q + 
Sbjct: 207 V-----------RFPYMEATGGGLGELRFVAFHSVAPVPRSVG-------------QWRS 242

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
               + Q      P VIAGDFN  +++    +                    S       
Sbjct: 243 DLGTVGQWCSGDTPAVIAGDFNATLDHSVFREATA----GCGDAAAQTGNGLSGTWPTWA 298

Query: 251 LRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                P ID+ +              +   ++   +        DH  +    
Sbjct: 299 PAWLGPQIDHVLSTG---------GITAESFSTHVVPGT-----DHRAVVTTL 337


>gi|254283677|ref|ZP_04958645.1| endonuclease/exonuclease/phosphatase family protein [gamma
           proteobacterium NOR51-B]
 gi|219679880|gb|EED36229.1| endonuclease/exonuclease/phosphatase family protein [gamma
           proteobacterium NOR51-B]
          Length = 295

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 78/284 (27%), Gaps = 63/284 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +RLV+WNI            K +      D   L  +  +   D++ LQE       
Sbjct: 64  PEAIRLVNWNIE-----------KGTNPLWADD---LANFLSST--DLITLQEGS----- 102

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
               P        S    ++ ++  +N+   T +    +   +      L+  +      
Sbjct: 103 ----PSLPMVNRLSDRYRVSFAEGYTNSYQRTGVMTFSEVEPIA--ECKLISYEPWLRTP 156

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                    ++   + + V++IH  +F                LS Q       I     
Sbjct: 157 KATLVTRYGLKGTDQTLLVINIHGINFSLG----------LIELSAQFDDAAALIAAHTG 206

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P V  GDFN   +      D          L     + D      +       +D+ 
Sbjct: 207 ---PVVFTGDFNTWHSG---RIDLLDRKKTGLGLSALSFDPD-----YRTRTFGHALDHI 255

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +                  +     S   + SDH P+  +  +
Sbjct: 256 YVRG---------------LDALFTASPDLQSSDHNPLIAELRY 284


>gi|315163823|gb|EFU07840.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX1302]
          Length = 330

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 85/314 (27%), Gaps = 64/314 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ + ++NI+  +    V   +  +     +   +++  +N         E   Y+ + 
Sbjct: 47  NELVVATFNIDIKAPGVKVEDQRKLLSDKGVEIFGIQEVIQNTK----RYAEREDYDPLE 102

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF---- 137
               +     F+            +       +           +  PL+   +      
Sbjct: 103 DFQMQPYEFSFFGKSVDFASGGYGNAIISKYQLKDESVVPLYSAEEVPLVIQTEFLEVYK 162

Query: 138 -------------------------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
                                         R    +++   GK I     HL        
Sbjct: 163 SVNYRDQESVDAFKSAWGADGLVAKGAIEPRSYSRVVINKEGKNIAFYVTHL-------- 214

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK--INYLGNNDDFWKTIDP 230
                  S  +  +Q Q LK  +    ++    ++ GDFN    IN     ++ +K  + 
Sbjct: 215 ----SVESVDVRKKQFQQLKKALD--SDTTTYKILVGDFNADDGINEYDIFNEGYKMANG 268

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            + +      ++       +   ++  +D  ++  N                 +      
Sbjct: 269 YEGVWLETMAEEDFARKAVDSDLRVKFLDNVIVSDNIEIK------KVETLKTN------ 316

Query: 290 KRLSDHCPISIDYD 303
             LSDH P+ +  +
Sbjct: 317 --LSDHLPLVVRLE 328


>gi|312378250|gb|EFR24880.1| hypothetical protein AND_10253 [Anopheles darlingi]
          Length = 723

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/335 (11%), Positives = 80/335 (23%), Gaps = 61/335 (18%)

Query: 24  VRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----------ADI-- 68
           +R+   ++N+N       V+    S+     D   L +    +D            D+  
Sbjct: 14  IRVACGTYNVNGGKHFRSVAYKDVSLADWLLDCHRLARSRSLVDFSHAEDTNEPPVDVFA 73

Query: 69  VFLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKN 120
           +  QE+   NA   V        +W          +             +     +R K+
Sbjct: 74  IGFQEIVDLNASNIVAASSDNAKSWAEELQKVVSRDEEYVMLTYQQLVGVCLYIFIRPKH 133

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              ++               GN+ A  +   ++G  +  +  H  +     +  N     
Sbjct: 134 APYIRDVAIDCVKTGLGGATGNKGAAAIRFVLHGTSLCFVCAHFAAGQSQVAERNADYAE 193

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------------------N 220
            +        +   + +  +S       GDFN +I+                        
Sbjct: 194 ITRK------IAFPMGRSLKSHDYIFWCGDFNYRIDMDKDELREMLRGGGASTDLSTILP 247

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYK 268
            D      +       F + + +     K                    D  +  +    
Sbjct: 248 YDQLRIQQNAGSVFNEFLEGEITFPPTYKYDLFSDDYDTSEKARAPAWTDRVLWRRRKQS 307

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                 + SDH P+    D
Sbjct: 308 PDADRHPGWNPGRLVHYGRAELKQSDHRPVIALID 342


>gi|254415356|ref|ZP_05029117.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196177831|gb|EDX72834.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 334

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 72/292 (24%), Gaps = 68/292 (23%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             P      Q +R++  N+ + +                  Y       K     ++ +Q
Sbjct: 99  FSPINTPSGQPLRVLLANVYSDN----------------QRYAEFISLVKAEKPQLLVVQ 142

Query: 73  EMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           E+       +  + P   + I Y                 +  IAV              
Sbjct: 143 EINPIWSKQLEALKPLLPYQIVY-------------PRFDNFGIAVYSAIPLRNTDIKSF 189

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                          +   V+  G+ + ++  H              +      +QQ   
Sbjct: 190 TEYDIPS--------IFTEVQWQGQTVSIIATHPLPPI--------NAEYFKSRNQQLLE 233

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L+  I+    +     + GD N  +          K I                      
Sbjct: 234 LEKVIS---STNTIHAVIGDLNTTMWSPYYR----KFIRQTGLKNARSGFGILPTWPQGA 286

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +IP+D+ ++        I              ++ G   SDH P+ +D 
Sbjct: 287 PMLQIPLDHCLISPEINVLAI--------------RTGGDIGSDHRPLIVDL 324


>gi|294627051|ref|ZP_06705641.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598713|gb|EFF42860.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 419

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/414 (10%), Positives = 95/414 (22%), Gaps = 119/414 (28%)

Query: 1   MIRKYVL----ALVFFLVPCTA------------SVAQKVRLVSWNINTLSEQEGVSLWK 44
           MI+  +L    AL                       A ++R+ ++N +  S++ G  + +
Sbjct: 11  MIKPLLLLAQTALCAACAHPAPSPKMQTDTLAARPAAAQLRIATYNTSLYSDEAGGLIRE 70

Query: 45  NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
                  +    +    + +  D+V L E   ++   +             +     + R
Sbjct: 71  LQGDSAHAR--KIAAVLQRVRPDLVLLNEF-DFDPEHRAADLFQQRYLQVAQPGGGEALR 127

Query: 105 DSNND--------------------------------------IHTAIAVRKKNVRVLQQ 126
                                                          + V  +     Q 
Sbjct: 128 YPYRYLAPVNTGVPSGLDLDNNGSAGGEGRARGNDAWGYGLHPGQYGMLVLSRYPIDAQA 187

Query: 127 SYPLLGAKDSFSRAGNRR------------AVELLVEINGKK------------IWVLDI 162
                  K S      R             A+   + ++ K             +  L  
Sbjct: 188 VRSFQLLKWSALPGALRPIDPASKTSYYSDAIWAQLRLSSKSHWDVPVRTPVGVVHALVS 247

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWL------KDWITQKK------ESLVPFVIAGD 210
           H     F  + +   + +   L     +L      + W+   K       +   FVI GD
Sbjct: 248 HPTPPVFDGAEKRNAARNHDELQLWRAYLDNAPDSQRWLCDDKGGCGGLAADARFVILGD 307

Query: 211 FNRKINYLGNNDDFWKTI-------------DPNDSLIRFPKEKDSRCNANKNLR----- 252
            N          +  + +                              ++    +     
Sbjct: 308 LNNDPVDGAGRHEAIRALIHHPRVLQYPTPHSDGGPEKTAEYAALGIAHSGDPHQVTGDF 367

Query: 253 ----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 + +DY +  +     +    F       +   + G   SDH  + ID 
Sbjct: 368 GPQAGTMRLDYVLPSRQFT-LIGSGIFWPASNAPEAAIADG---SDHHAVWIDL 417


>gi|319784539|ref|YP_004144015.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170427|gb|ADV13965.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 348

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/256 (10%), Positives = 56/256 (21%), Gaps = 63/256 (24%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             +       + D++ L E+ +  A    +  + +           +       +    +
Sbjct: 122 KKVLSLIGRTNPDVITLDEVSAMWATELGYISSAY----------PYRILCPYPNKIFGV 171

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSL 173
           A+  +             A  + +R   R A+    V+  G  + V  IHL         
Sbjct: 172 ALLSRRPF----------AAGTEARCERRGAMATATVDFGGIDVDVAAIHLSWPWP---- 217

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                        Q   L + ++         ++AGD N                     
Sbjct: 218 --------REQYWQIGELTEPLSAL---GETAIMAGDCNAAPWSAAVRRV-------AAL 259

Query: 234 LIRFPKEKDSRCNANKN-LRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                         +              ID                             
Sbjct: 260 GGLTVMPSAGPTWIHIRLPDFLRRFAGLPIDQVFSKGG--------------VTIHSATR 305

Query: 288 RGKRLSDHCPISIDYD 303
                SDH P+ +++ 
Sbjct: 306 LEDTGSDHLPVMVEFS 321


>gi|261327561|emb|CBH10537.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 654

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 66/214 (30%), Gaps = 13/214 (6%)

Query: 21  AQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           A   R+V++N+          +++       + +       + + Q     + DI+ LQE
Sbjct: 250 APSFRMVTYNVLHEEFCSTSSAKKTIYPFATDDILSLEYRQSRIVQELLAYNGDIICLQE 309

Query: 74  MGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-- 128
            G        ++V  +  +   Y+ +                     K    +   +   
Sbjct: 310 CGKKVYQQFFSRVMTQYGYEGCYTNKNGGVREGCACFWRRSRFFLQEKDEFPLNWSTMEK 369

Query: 129 -PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                A +       + A+E +  I    +   +   +     ++    ++ +C +   Q
Sbjct: 370 EHPALAAEVTRHPELKEALENVTSIGALVLLKDNATNEELVVGNTHLFYHANACHIRLLQ 429

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
              L   +  + +S    V+ GDFN      G  
Sbjct: 430 VYMLLHKLKSRSDSRRGVVLCGDFNFTHRTGGYK 463



 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 27/91 (29%), Gaps = 2/91 (2%)

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
           +Y    D +   ++            D      N  +  +  IDY   + +    +    
Sbjct: 563 DYRPPFDVYRADMEAPMQFTDAYGVTDPEMPWTNYTMTFREVIDYVFFNPDRLLVVQTIP 622

Query: 275 FS-EILYNEDDIKSRGKRLSDHCPISIDYDF 304
              E   +E+      K  SDH  +  D  +
Sbjct: 623 IPPESELSENVALPNRKYPSDHVALIADLSY 653


>gi|302547749|ref|ZP_07300091.1| putative secreted protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302465367|gb|EFL28460.1| putative secreted protein [Streptomyces himastatinicus ATCC 53653]
          Length = 182

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 48/181 (26%), Gaps = 23/181 (12%)

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
              P +   +++  A  R    +  +          ++          +     +  L++
Sbjct: 21  SDTPYVIGSNTWGGAVVRMVTWVRFQDRATDRQFYALNTHL---DHISQYARERAAGLIN 77

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--IDPNDSLIRFPKEKDS 243
            +   L           +P ++ GDFN   +     D       +           +  +
Sbjct: 78  VRLAGLN--------PALPRIVTGDFNVAAHGNPVYDTLLNGGSLTDAWDTADRRSKLYA 129

Query: 244 RCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +  K L      ID+ +                     D   S G+  SDH P+    
Sbjct: 130 TFHGYKPLVPDGDRIDWILTSPGVRTRYAA---------IDTYSSGGQFPSDHLPVHAVL 180

Query: 303 D 303
           +
Sbjct: 181 E 181


>gi|332076419|gb|EGI86882.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA41301]
          Length = 333

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LVTNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNALPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|296453536|ref|YP_003660679.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296182967|gb|ADG99848.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 369

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/290 (8%), Positives = 68/290 (23%), Gaps = 63/290 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +++ +  +++ N                     +D   + +  +  +  ++ LQE+   
Sbjct: 137 ETLSPQFSVMTMNCRY----------------GRADAAEIIRNIRERNISVLALQEVTDD 180

Query: 78  NAVA----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                    +     +  F   +   N       +    + AV    V +     P +  
Sbjct: 181 LITRLTEADINELLPYHQFGDAKETDNGGFNVIYSRYEPSAAV-PNVVSIPAADVPAITL 239

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           K                    + + +   H KS     +  +        L++       
Sbjct: 240 K----------------TSGNRTVTLCSAHPKSPMRGCADWSAGILGLRELAR------- 276

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              +   +    V+ GD N   ++                +                   
Sbjct: 277 --AKSVSNRNIVVVMGDLNSSTDHPSFRALLKSGFKDASLIQAAGPNL---TFPRWLKWP 331

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +I +D+ +  Q               +   D         DH  ++    
Sbjct: 332 RIELDHILFTQGLRPS------GVTSFEVPDT--------DHLALAATLT 367


>gi|307544062|ref|YP_003896541.1| hypothetical protein HELO_1473 [Halomonas elongata DSM 2581]
 gi|307216086|emb|CBV41356.1| hypothetical protein HELO_1473 [Halomonas elongata DSM 2581]
          Length = 812

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/369 (11%), Positives = 91/369 (24%), Gaps = 99/369 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ ++N  +L+  +   L  +           +    +    DI+ L E       A+
Sbjct: 11  SLRIATYN-ASLNRSQQGELLSDLSTPDDPQAQQIASVIQQNRPDILLLNEFDYSPEAAQ 69

Query: 83  VFPKNTWCIFYSTERLINHSKRDSN----------------------------------- 107
            F  N   +  + +  I++    S                                    
Sbjct: 70  AFLDNYLNVSQAGDTPIDYPYVYSAPVNTGIASGMDLNGDGQVVTEPGTDGYADDALGFG 129

Query: 108 -NDIHTAIAVRKKNVRVLQQ---------------SYPLLGAKDSFSRAGNRRAV----- 146
                  + V  +   +                    P   +        +  A+     
Sbjct: 130 QFPGQYGMLVLSRYPIIENDIRTFQQFPWADMPGARLPDDPSTPQPHDYYDAEALDTLPL 189

Query: 147 ------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK----DWI- 195
                 +L +++NG+ + +L  H     F  + +     +   +   A ++     D+I 
Sbjct: 190 SSKSHWDLPIDVNGEIVHLLASHPTPPTFDGAEDRNGLRNADEIRFWADYISPEKGDYIV 249

Query: 196 -----TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI------------DPNDSLIRFP 238
                    +    FVIAGD N       +     + +            D +   +   
Sbjct: 250 DDDGQRGGLDGGQRFVIAGDQNVDPVDGDSLPGAAQQLLGNAHIAAGLAPDSDGGTVAAA 309

Query: 239 KEKDSRCNANKNLRNK-----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +         + R             + +DY +  Q     L           E    S
Sbjct: 310 TQGGDNAGQQGDPRFDTADFSEPSPGNLRVDYVLPSQFGLTRLDGGIVWPT---EGTPGS 366

Query: 288 RGKRLSDHC 296
                SDH 
Sbjct: 367 DATAASDHR 375


>gi|311265022|ref|XP_003130450.1| PREDICTED: protein angel homolog 2-like [Sus scrofa]
          Length = 544

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 66/206 (32%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 166 DFSVMSYNILSQDLLEDNSHLYRHCRQPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 225

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++   ++    K D         A+  K+ +    S   +       
Sbjct: 226 YGTEIRPSLESLGYHCEYKMRTGKKPD-------GCAICFKHSKFSLLSVNPVEFFRPNV 278

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +R  V L++ +  K          + C  ++          +   Q   L   I+  
Sbjct: 279 PLLDRDNVGLVLLLQPKS---PSAASPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 335

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P VI GDFN        
Sbjct: 336 AHQKDGSFCPIVICGDFNSVPGSPLY 361


>gi|194208740|ref|XP_001915949.1| PREDICTED: similar to neutral sphingomyelinase II [Equus caballus]
          Length = 588

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 75/303 (24%), Gaps = 75/303 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A AK+  +    +        +       S   +++ +    +   
Sbjct: 287 NLDFLCLQEVFDKRAAAKLKDQLHGYFEYILYDVGVYGCQGCCSFKFLNSGLFFASRYPI 346

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y             ++ A+ L V++         +   S   L +L        +
Sbjct: 347 MDV-AYHCYPNGRCSDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLHALP----EDSA 401

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +  +Q   L+DW+   ++S                VI GDFN                  
Sbjct: 402 IRCEQLDLLQDWLADFRKSTSSSSAANPEELVAFDVICGDFNFDNCSSDDKLEQQHSLFT 461

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSR---------------CNANKNL- 251
                              T+   D L                                 
Sbjct: 462 RYKDPCRLGPGEEKPWAIGTLLDTDGLYDEDACTPENLQKVLESEEGRREYLAFPTSKSA 521

Query: 252 ------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                        N   IDY +  +       +    E  +           L+DH P++
Sbjct: 522 GAGQKGRKDLLKGNGRRIDYMLYTEEGLCLDWKAEVEEFSFITQL-----SGLTDHLPVA 576

Query: 300 IDY 302
           +  
Sbjct: 577 MRL 579


>gi|124505041|ref|XP_001351262.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Plasmodium falciparum 3D7]
 gi|7768299|emb|CAB11122.2| endonuclease/exonuclease/phosphatase family protein, putative
           [Plasmodium falciparum 3D7]
          Length = 906

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/348 (12%), Positives = 94/348 (27%), Gaps = 70/348 (20%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R++S+NI          + +           +T     LL     N + DI+ LQE+ S
Sbjct: 560 IRILSYNILAPIYTNTKYALEHMFKNIDPCYLKTNYRSHLLIHDINN-NYDIISLQEV-S 617

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS--------------NNDIHTAIAVRKKNVR 122
               + +F       ++S  +  N+   D                 +      ++    +
Sbjct: 618 EYLHSHLFCTFLNENYFSNYKPKNNFGNDGCSLFVNKKKFTLIEYKNYEFNQVIKTDEFK 677

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
            + +++  L  +        +   ++ + ++     +  I    F F    ++  +    
Sbjct: 678 SIYETFLNLSKELDDIIKEIKTVFQIGIYMHKNTNSIFLISNTHFYFHSLAQHIRALQSY 737

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIA-GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
            +    Q LK            ++I  GDFN   +    +    K I P   +    +  
Sbjct: 738 TILHILQTLKKKYQLTYPEKEVYIILNGDFNTNFDSEVFHFIQGKDISPTSDIWFNAQLF 797

Query: 242 DSRC----------------------------------------------NANKNLRNKI 255
                                                               N N     
Sbjct: 798 KKEFDDLDKYPNLFELEKNKNNNEQSIIGPHLDRKKFMPLYSAYTKQDIQFTNWNNNFID 857

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +DY  +  N     + +   +  + +          SDH  I+ + +
Sbjct: 858 VLDYIFLSTNIKVRKVLKGIDKECFQKYKGALSPINPSDHISIAAEVE 905


>gi|60680731|ref|YP_210875.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis NCTC 9343]
 gi|253563421|ref|ZP_04840878.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265762703|ref|ZP_06091271.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|60492165|emb|CAH06928.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis NCTC 9343]
 gi|251947197|gb|EES87479.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263255311|gb|EEZ26657.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301162275|emb|CBW21820.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis 638R]
          Length = 341

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/359 (8%), Positives = 76/359 (21%), Gaps = 79/359 (22%)

Query: 2   IRKYVLALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           ++K +   +F LV  T       +  ++ WN+                      Y  +  
Sbjct: 1   MKKIIFMTLFLLVAMTGQSKGKGEFTVLQWNVWQEGTMVPGG------------YDAIVN 48

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               L  D V   E+ +       +    +                S     T +    K
Sbjct: 49  EIVRLQPDFVTFSEVRN-------YHNTRFNERIVASLKEKGLDYYSFYTYDTGLL--SK 99

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +      +                      V +    +  LD    +    D       P
Sbjct: 100 HPITDSLTVFPENGDHGSIYRLTSSVNGHKVAVYTSHLDYLDCAYYNVRGYDGSSWKEIP 159

Query: 180 S------------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND----- 222
                         S      +       +   +    +I GDFN   +           
Sbjct: 160 IPTTVEEVLKVNVASQRDDAIKMFIAQAQKDIANGYSVIIGGDFNEPSHLDWIEANKNLY 219

Query: 223 ---------DFWKTIDPNDSLIRFPKEKDSR-CNANKNL------------------RNK 254
                         ++ N  +  +     +   +                         +
Sbjct: 220 DHNGLVIPWTVTTLLEQNGFVDTYRHIYPNPLTHPGFTYPADNPLKEPGKLTWAPKADER 279

Query: 255 IPIDYFVM-DQNAYKF----------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ID+     +N              +++    +    ++ +       +DH  + + +
Sbjct: 280 DRIDFIFYKGKNLEAKKAIVFGPKGSIVRNKRVQETSKDNFLLPLDVWPTDHKGLLVTF 338


>gi|70954382|ref|XP_746240.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase)
           [Plasmodium chabaudi chabaudi]
 gi|56526785|emb|CAH87963.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase),
           putative [Plasmodium chabaudi chabaudi]
          Length = 350

 Score = 55.7 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/354 (10%), Positives = 92/354 (25%), Gaps = 94/354 (26%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------SYNA 79
           +V+WN+N+++ +           +    +    ++   ++AD++  QE+         N 
Sbjct: 8   IVTWNMNSITVRY----------KNKDKWKKFIKFVNEINADVLCFQEVRLPALNIPKNE 57

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFS 138
             KV    T+    + + +     R S  +      +    V  +L++ +    A  S +
Sbjct: 58  EVKVEDNKTYGRKKTEKIIDEERDRGSVKNTDQKSLLDYNIVEDILKKDFKEYNAYFSLA 117

Query: 139 RAGNRRAVELL---------------------VEINGKKIWVLDIHLKSFCFLDSLENTY 177
                  + L+                         G+ I +   +              
Sbjct: 118 NIKYSGQLVLVKKTIEVKSVRYNLSFDTNPNIHNDEGRIILLEFSNFYLLSTYSPNNGFD 177

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-------------------- 217
           +P           +K+++   K+     +  GD N                         
Sbjct: 178 APKFERRRLFDDSMKEFVLFMKKENKNLIWTGDLNIAPEDIDLSHPIEFRKMKKGNVPKE 237

Query: 218 --------LGNNDDFWKTIDPNDSLIRFPKE--------------KDSRCNANKNL---- 251
                        +F   +   D +  +                  +   N         
Sbjct: 238 YIGQPGCTDAERKNFKTILKNGDLVDSYRYFENYKIKNDPTYKKKTNINDNIYTWRCPFL 297

Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                   + ID+F++ ++    +              +       SDHCP+ +
Sbjct: 298 IGKSCNRAMRIDHFIVSKSLLDKIENVEIH-----GYSVSHTNFYGSDHCPVIL 346


>gi|19112545|ref|NP_595753.1| CCR4/nocturin family endoribonuclease [Schizosaccharomyces pombe
           972h-]
 gi|74639017|sp|Q9Y7M8|YNTB_SCHPO RecName: Full=Probable RNA exonuclease C9B6.11c
 gi|4760349|emb|CAB42372.1| CCR4/nocturin family endoribonuclease [Schizosaccharomyces pombe]
          Length = 502

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 76/234 (32%), Gaps = 20/234 (8%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLW-KNSVKRTTSDYTLLRQY 60
           I++ +L++  +    T   A  + ++++N+   +              +  +   +L   
Sbjct: 99  IKREMLSIPNYAPFETEKSALDITIMTYNVLAQTNIRRSMFPHSGEALKWKNRSRMLANE 158

Query: 61  AKNLDADIVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                  +  +QE+ +    N   K+     + + +       H          +++  +
Sbjct: 159 LTYYSPTLGCMQEVDAEFVPNFYKKLLGGLGYELHFIKGEGKTHG---IMIFWKSSLFKK 215

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +++ +    +  L  + +    G    +E  V+   + +++   HL    +        
Sbjct: 216 VQDLTIYYDDHDELPGRMNTKNIGCCVRLE-RVDDPSRGLFLATTHLFWHPYG------- 267

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTID 229
                   +Q   L   + +  +S    P  IAGDFN +           + + 
Sbjct: 268 ---SYERLRQGAILVKEVNKMAQSHPSWPVFIAGDFNTEPFDTNFPALTTRPLS 318


>gi|125543950|gb|EAY90089.1| hypothetical protein OsI_11658 [Oryza sativa Indica Group]
          Length = 523

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/275 (9%), Positives = 71/275 (25%), Gaps = 43/275 (15%)

Query: 44  KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERL 98
           ++      +    + +  +   AD+V LQ + +        ++++         ++    
Sbjct: 237 RHRSSSGAARRRSVAEALREAGADMVALQNVRAEEGRGMRPLSELAEGLGMRYVFAESWA 296

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKI 157
             +             AV  +       +  L    D       R  +   +E+ G  ++
Sbjct: 297 PEY-----------GNAVLSRWPIKRWNARRLADHFDF------RNVMRATIEVPGAGEV 339

Query: 158 WVLDIHLKSFCFLDSLENTYS--PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
            +   HL        ++   S                + +     S   +     ++ +I
Sbjct: 340 NLYCTHLDHLDEGLRMKQVDSILRFADGHHHILAGGLNALDASDYSADRWAAIAKYHEEI 399

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------ANKNLRNKIPIDYFVMDQNA 266
                  +  + +     +                          +    +DY +   N+
Sbjct: 400 GKPPPKSEVMRHLKAKRYVDAKDFAGGRDAGLVVVPNGQDVQGTCKYGTRVDYILASPNS 459

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +  S++ +              SDH  + +D
Sbjct: 460 PYSFVPGSYAVVPSMGT---------SDHHIVMVD 485


>gi|188575755|ref|YP_001912684.1| phytase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520207|gb|ACD58152.1| phytase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 410

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/379 (11%), Positives = 89/379 (23%), Gaps = 103/379 (27%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             A  +R+ ++N +  S++ G  + +       +    +    + +  D+V L E   ++
Sbjct: 35  PAAATLRIATYNTSLYSDEAGGLIRELQGDSAHAR--KIAAVLQRVRPDLVLLNEF-DFD 91

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNND----------------------------- 109
              +             +     + R                                  
Sbjct: 92  PEHRAADLFQQRYLLVAQPGGGEALRYPYRYLAPVNTGVPSGLDLDNNGSIGGEGRARGN 151

Query: 110 ---------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------AVEL 148
                        + V  +    +Q        K S      R             A+  
Sbjct: 152 DAWGYGLHPGQYGMLVLSRYPIDVQAVRSFQLLKWSALPGALRPIDPASKTSYYSNAIWA 211

Query: 149 LVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----- 191
            + ++ K             +  L  H     F  + +   + +   L     +L     
Sbjct: 212 QLRLSSKSHWDVPVRTPLGVVHALVSHPTPPVFDGAEKRNAARNHDELQLWRAYLDNAPE 271

Query: 192 -KDWITQKK------ESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            + W+   K      +S   FVI GD N    +  G +      I+    L       + 
Sbjct: 272 SQRWLCDDKGNCGGLDSDARFVILGDLNNDPVDGAGRHAAIRALINHPRVLQYPTPRSEG 331

Query: 244 R---------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                                           + +DY +        +    F       
Sbjct: 332 GPEKTAEYAALGIAHSGDPHQVTGDFGPQAGTMRLDYVLPSHQFT-LIGSGIFWPASSAP 390

Query: 283 DDIKSRGKRLSDHCPISID 301
           +   + G   SDH  + +D
Sbjct: 391 EAAIADG---SDHHAVWVD 406


>gi|301763641|ref|XP_002917232.1| PREDICTED: LOW QUALITY PROTEIN: protein angel homolog 2-like
           [Ailuropoda melanoleuca]
          Length = 546

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 168 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 227

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +      +D   
Sbjct: 228 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFYRRDVPL 282

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +        C  ++          +   Q   L   I+  
Sbjct: 283 LDRDNVGLVLLLQPK-----IPSAASPVICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 337

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 338 AHQKDGSFCPIVMCGDFNSVPGSPLY 363


>gi|70794813|ref|NP_067396.3| protein angel homolog 2 isoform 1 [Mus musculus]
 gi|81878438|sp|Q8K1C0|ANGE2_MOUSE RecName: Full=Protein angel homolog 2
 gi|22137626|gb|AAH24907.1| Angel homolog 2 (Drosophila) [Mus musculus]
 gi|74177531|dbj|BAE34634.1| unnamed protein product [Mus musculus]
 gi|148681068|gb|EDL13015.1| angel homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
          Length = 544

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 20/207 (9%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 166 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 225

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++   ++              AI  +     +L  +      +D   
Sbjct: 226 YGTEIRPSLESLGYHCEYKMKT-----GRKPDGCAICFKHSRFSLLSVNPVEFCRRDIPL 280

Query: 139 RAGNRRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
              +   + LL++          I + + HL                 + L+     + +
Sbjct: 281 LDRDNIGLVLLLQPKIPRAASPSICIANTHLLYNP------RRGDIKLTQLAMLLAEIAN 334

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN 220
              +K  S  P V+ GDFN        
Sbjct: 335 VTHRKDGSSCPIVMCGDFNSVPGSPLY 361


>gi|149041026|gb|EDL94983.1| angel homolog 2 (Drosophila) (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 359

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI---NTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI     L +        +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 144 DFSVMSYNILSQELLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 203

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++   ++              AI  +     +L  +      +D   
Sbjct: 204 YGTEIRPSLESLGYHCEYKMKT-----GRKPDGCAICFKHSKFSLLSVNPVEFCRRDIPL 258

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +      S C  ++          +   Q   L   I+  
Sbjct: 259 LDRDNIGLVLLLQPK-----IPRAASPSICIANTHLLYNPRRGDIKLTQLAMLLAEISNV 313

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 314 AHQKDGSFCPIVMCGDFNSVPGSPLY 339


>gi|149002137|ref|ZP_01827091.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
 gi|147759946|gb|EDK66936.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
          Length = 245

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 62/247 (25%), Gaps = 35/247 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 55  KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 113

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +               +  ++    L        +   
Sbjct: 114 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAEL--------DKEK 160

Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD+N               R   +       +  +        F           
Sbjct: 161 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERY 220

Query: 249 KNLRNKI 255
                + 
Sbjct: 221 TWWAQRS 227


>gi|325117381|emb|CBZ52933.1| Carbon catabolite repressor protein, related [Neospora caninum
            Liverpool]
          Length = 1483

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 47/165 (28%), Gaps = 27/165 (16%)

Query: 16   CTASVAQKVR----------LVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
             +AS   ++R          +++WN+        +        +         +      
Sbjct: 955  SSASARDELRPEDAEQFNVSVMTWNVLAELYGTLDAFPHCDAYMLAWPYRRQRILDEILT 1014

Query: 64   LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI---------NHSKRDSNNDIHTAI 114
             + D+V LQE+ S +      P+     +    +                        A 
Sbjct: 1015 HNPDVVCLQEVQSEHFEDFFLPELARHGYNGMYKQKTMEIFTSGSGKKSGGKFTMDGCAT 1074

Query: 115  AVRKKNVRVLQQSYPLLG------AKDSFSRAGNRRAVELLVEIN 153
              RK    ++ Q            +++   R   R+AV  L++ N
Sbjct: 1075 FYRKSKFTIVDQCGLEFSQLIKQASREQLPRQLQRQAVRRLLKDN 1119



 Score = 42.2 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 41/192 (21%), Gaps = 58/192 (30%)

Query: 171  DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP------------FVIAGDFNRKINYL 218
            ++       S  +   QAQ L   I +   +  P             V+ GDFN   +  
Sbjct: 1290 NTHIVANPESNDVKIWQAQTLVGMIEKYLLAFRPPTYLDSPCLTPAVVLCGDFNSTPDSA 1349

Query: 219  ------------------GNNDDFWKTIDPN-------------------DSLIRFPKEK 241
                               +       ++                     D    +   +
Sbjct: 1350 VYQLLVTGRCDRQHTDLASDRHGLLAELNLGHNIPLKSGYAVSKALKDGLDPHDFYALRQ 1409

Query: 242  DSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDD--------IKSRGKRL 292
                  N        +DY            I E         +               R 
Sbjct: 1410 SEPEFTNYTGNYTGCLDYLFFTDTMLRVREILEPVDSKQLFREARQLQLLHQALPSPLRP 1469

Query: 293  SDHCPISIDYDF 304
            SDH P+   +++
Sbjct: 1470 SDHIPLLCKFEW 1481


>gi|149010798|ref|ZP_01832169.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Streptococcus pneumoniae SP19-BS75]
 gi|147765279|gb|EDK72208.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Streptococcus pneumoniae SP19-BS75]
          Length = 333

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 88/291 (30%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++    + IA       ++++SY     
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTDSGIA---PVTVIVKKSYDFYTK 193

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++F     R    +L         ++ +H                   L+    Q L  
Sbjct: 194 AETFHT--TRFGTIVLHSRKQDIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNALPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|146181039|ref|XP_001022028.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|146144304|gb|EAS01783.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 449

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 82/250 (32%), Gaps = 16/250 (6%)

Query: 18  ASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           +   +++R++ +N+     +                +   LL +  K +D  I+ LQE  
Sbjct: 41  SHQKKELRIMQYNVLAPCYTYPNLYPDCTKQDLEWNARLDLLIKEIKFVDPTILCLQETQ 100

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               +  ++  N          +I+  K  S  D  T I  +++   +      L  +  
Sbjct: 101 ----LDTLYDLNDKLREIFDVSVIHRLKGKSKKDGCTTIFKKEEYEEIYSVKLDLDQSSS 156

Query: 136 SFSRAGN----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            +S           +  L++   K    + I    F +   +         L++     +
Sbjct: 157 IYSELQWINCENICLFTLLKDKKKPNSFILIGNTHFIYSPQMGLVKLGQAKLITS---AI 213

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           K  +  + +  +   + GDFN   N    +    ++I+          E  ++  A    
Sbjct: 214 KSILEAEGDKNIDVFLCGDFNFIPNSALYSFFTQQSIN---FESLPLHEVSNQDMAYTFE 270

Query: 252 RNKIPIDYFV 261
           +N+  ID   
Sbjct: 271 KNENSIDQHF 280


>gi|73966507|ref|XP_851979.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILQG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN          K N          T+D  D    +     +           
Sbjct: 141 --LILGDFNLALSILDRSSKHNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|304391176|ref|ZP_07373120.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130]
 gi|303296532|gb|EFL90888.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130]
          Length = 254

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/253 (11%), Positives = 68/253 (26%), Gaps = 31/253 (12%)

Query: 58  RQYAKNLDADI--VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
                  D  I  +  Q    ++ + +  P +      +    + H +    ++   A  
Sbjct: 26  AAVMDYRDPKIGTILPQRARMFDEICEALPGHRATFCPAARGDLWHGEHAYPSEWGLATF 85

Query: 116 VRKK---NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFL 170
           VR++     +V   ++   GA        +R A  + +   +  + + +  +H       
Sbjct: 86  VRRELTVIGQVQDFAHGGFGAHGYGDHPRSRSAHVVRLYDFVADQPVTIAHLH------- 138

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
              +          + QA    D I          V+ GD N   +         +    
Sbjct: 139 GLRDLAGKDDTPERAAQAHCFADLIDVVHREGERLVVCGDLNVCPDSETLRILQSRL--- 195

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                               L+ +   DY  ++            +   ++         
Sbjct: 196 -GLTELVTSRGFETTRTALYLKPERFADYMFVNDA---------VTVAAFDVLTQPE--- 242

Query: 291 RLSDHCPISIDYD 303
            +SDH  + ++  
Sbjct: 243 -VSDHATLVLELS 254


>gi|296086676|emb|CBI32311.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/282 (9%), Positives = 75/282 (26%), Gaps = 77/282 (27%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNN 108
              + +  + LDADI+ LQ++ +        ++ +         ++      +       
Sbjct: 122 RRTVVEVLRELDADILALQDVKAEEEKAMKPLSDLAAALGMNYVFAESWAPEY------- 174

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSF 167
                 A+  K      +   +    D       R  ++  +++    ++     HL   
Sbjct: 175 ----GNAILSKWPIKRWKVQKIFDDTDF------RNVLKATIDVPQAGEVNFHCTHLDHL 224

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------RKINY 217
                         +   +Q   +         +  P ++AG  N          R  + 
Sbjct: 225 ------------DENWRMKQINSIIQ------SNEGPHILAGGLNSLDETDYSSERWTDI 266

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-----------------NLRNKIPIDYF 260
           +   ++  K     + +     ++ +                         +    +DY 
Sbjct: 267 VKYYEEMGKPTPKVEVMKFLKSKQYTDAKDFAGECESVVMIAKGQSVQGTCKYGTRVDYI 326

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   ++    +  S+S                SDH  + +D 
Sbjct: 327 LASPSSPYKFVPGSYSVFSSKGT---------SDHHIVKVDI 359


>gi|225436869|ref|XP_002271044.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 469

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/282 (9%), Positives = 75/282 (26%), Gaps = 77/282 (27%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNN 108
              + +  + LDADI+ LQ++ +        ++ +         ++      +       
Sbjct: 194 RRTVVEVLRELDADILALQDVKAEEEKAMKPLSDLAAALGMNYVFAESWAPEY------- 246

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSF 167
                 A+  K      +   +    D       R  ++  +++    ++     HL   
Sbjct: 247 ----GNAILSKWPIKRWKVQKIFDDTDF------RNVLKATIDVPQAGEVNFHCTHLDHL 296

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------RKINY 217
                         +   +Q   +         +  P ++AG  N          R  + 
Sbjct: 297 ------------DENWRMKQINSIIQ------SNEGPHILAGGLNSLDETDYSSERWTDI 338

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-----------------NLRNKIPIDYF 260
           +   ++  K     + +     ++ +                         +    +DY 
Sbjct: 339 VKYYEEMGKPTPKVEVMKFLKSKQYTDAKDFAGECESVVMIAKGQSVQGTCKYGTRVDYI 398

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   ++    +  S+S                SDH  + +D 
Sbjct: 399 LASPSSPYKFVPGSYSVFSSKGT---------SDHHIVKVDI 431


>gi|223939336|ref|ZP_03631215.1| conserved hypothetical protein [bacterium Ellin514]
 gi|223891940|gb|EEF58422.1| conserved hypothetical protein [bacterium Ellin514]
          Length = 138

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 38/129 (29%), Gaps = 18/129 (13%)

Query: 7   LALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           +AL+      + +VA+        R++++NI   +  +              D     + 
Sbjct: 22  MALLAGCSSASKTVARHDTKPVTFRVMTYNIQHGAGMD-----------HKVDLLRTAEA 70

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            K+   DIV L+E+       +     T     +  R    +            A   K 
Sbjct: 71  IKHEQPDIVALEEVDKGVERTERRDLTTELAAMTGMR-GYFNNNFFFQGGEYGNAALTKF 129

Query: 121 VRVLQQSYP 129
             +   +  
Sbjct: 130 PILTSTNSH 138


>gi|255514310|gb|EET90569.1| Endonuclease/exonuclease/phosphatase [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 234

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 77/291 (26%), Gaps = 70/291 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77
           ++L+  NI   ++               +    +  + K    DIV LQE+         
Sbjct: 2   LKLLDLNIWLYND-------------WEARMPKIVNFIKEQKPDIVTLQEVMDDAKYNKY 48

Query: 78  -----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                  +A+    +    + S        +   +       A+  K          L  
Sbjct: 49  GDNTAKQIARAAGMDNCAFYLSGNLQKESPQWIGDRRARAGEAILSKYPLTKIVKKKLKR 108

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D       R  V+  V ++   I ++ +H  +                    Q + + 
Sbjct: 109 HPDDRHH---RGIVKARV-MSEPPIDIIVVHFSNNDLFS-------------RLQMEEVL 151

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
            +I + +      V+ GDFN             + +  +  L    K             
Sbjct: 152 HYIRRARIRP---VVVGDFNMYPKN------IMQMVPEDYILSYALK------KYVSFPS 196

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                DY ++ ++     ++                 + LSDH  +  +  
Sbjct: 197 EGNTFDYMMIPRSMRFGSLECI--------------DRGLSDHSALIAEIS 233


>gi|168485698|ref|ZP_02710206.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae CDC1087-00]
 gi|183571088|gb|EDT91616.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae CDC1087-00]
          Length = 333

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 88/291 (30%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA       ++++SY     
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA---PVTVIVKKSYGFYTE 193

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             +F     R    +L         ++ +H                   L+    Q L  
Sbjct: 194 TKTFHT--TRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNVLPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|6323517|ref|NP_013588.1| Ngl3p [Saccharomyces cerevisiae S288c]
 gi|2497064|sp|Q03210|NGL3_YEAST RecName: Full=Probable RNA exonuclease NGL3
 gi|151946045|gb|EDN64276.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|285813885|tpg|DAA09780.1| TPA: Ngl3p [Saccharomyces cerevisiae S288c]
          Length = 505

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 65/221 (29%), Gaps = 9/221 (4%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +  V+++++N    TL  ++          +      +L    K    D+V LQE+
Sbjct: 102 VTQDSLDVKIMTYNTLAQTLIRRD-FFPESGPALKWHKRSKVLVHELKKYRPDVVSLQEV 160

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                N   + F K  + + +       H    + N+    +            +  ++ 
Sbjct: 161 DYNELNFWQENFHKLGFDVIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVIS 220

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A+          ++      +     ++  +   F     +      S  +     Q ++
Sbjct: 221 ARTRTKNIALIISLYFKGITDSSSRGIIVANTHLFWHPFGVFERLRQSYLV----LQKIQ 276

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +     K +    ++ GDFN +           + +     
Sbjct: 277 EIKACSKYNGWHSLLMGDFNTEPEEPPYLAITKRPLILKGP 317


>gi|322495024|emb|CBZ30327.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 704

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 69/260 (26%), Gaps = 43/260 (16%)

Query: 24  VRLVSWNINTLSEQEG-------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            R+V++NI                    + +    +    + Q       DIV LQE G 
Sbjct: 285 FRVVTYNILYDDFCTSKSSKAKIYPFATDDILDLENRKVRIVQELLAYHMDIVCLQECG- 343

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--- 133
                 VF      +  +      +  +  +         R+   +++Q +   L     
Sbjct: 344 ----RDVFQSYFLPVMRACGYDGVYCNKSGSVKEGCGFLFRESRFQLVQYASVPLNFQTL 399

Query: 134 --------KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                   +   +    + A+  +  I  + +       K     ++    ++ +C +  
Sbjct: 400 SIMFPELAERVGACPELKEALSAVTSIGARVVLRESTSDKEIVVGNTHLFYHANACHIRV 459

Query: 186 QQAQWLKDWITQ--------------------KKESLVPFVIAGDFNRKINYLGNNDDFW 225
            QA  L  W+                      +     P V+ GDFN             
Sbjct: 460 LQAYMLLHWLNDSTLISPDADPAAPPPLSLANRARRRRPLVMCGDFNCTHPTGAYRLLTT 519

Query: 226 KTIDPNDSLIRFPKEKDSRC 245
             ++ +       +     C
Sbjct: 520 GQVEADHPSWDKGRLFWWGC 539



 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             N  L  +  IDY    +++ + L      SE    E+      K  SDH  +  D  F
Sbjct: 642 WTNFTLTFREVIDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADLAF 701


>gi|148238331|ref|NP_001089542.1| angel homolog 2 [Xenopus laevis]
 gi|66911787|gb|AAH97844.1| MGC115586 protein [Xenopus laevis]
          Length = 536

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 67/204 (32%), Gaps = 19/204 (9%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E      S  +  +   +     + +   +++ADI+ LQE+   +
Sbjct: 165 DFTVLSYNILSQDLLEDNSHLYSHCRRPILIWSYRLPNILKELADMNADILCLQEVQENH 224

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++       +  R  +     AI  +     ++  +       +   
Sbjct: 225 YRTQIKPSLESLGYHCE-----YKARTGDKPDGCAICFKSDKFSLVSVTPVEYYRPNIAL 279

Query: 139 RAGNRRAVELLVEINGKK----IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              +   + LL++   ++    I V + HL                 + L+     + + 
Sbjct: 280 LNRDNIGLVLLLQPKSQRAAPVICVANTHLLYNP------RRGDIKLAQLAILLAEIANV 333

Query: 195 ITQKKESLVPFVIAGDFNRKINYL 218
              K     P V+ GDFN      
Sbjct: 334 AFTKDRGFCPIVLCGDFNSVPGSP 357


>gi|47230227|emb|CAG10641.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 422

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/244 (11%), Positives = 67/244 (27%), Gaps = 15/244 (6%)

Query: 24  VRLVSWNINTL----SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             ++S+NI       +  +  +               +    +    DI+ LQE+   + 
Sbjct: 1   FTVMSYNILADDLVQANLDLYAHCPWQALDWNYRCRRILLEIQKWAPDILCLQEVQENHF 60

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              V+P  +   +        + +R  N     A   R      +  S       ++   
Sbjct: 61  YQHVYPVLSQLGYSCA-----YKRRTGNKTDGCATCYRVCRFAEVSVSALEFYRPETKLL 115

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +  A+ +L+     +    +      C +++          +   Q   L   I +  
Sbjct: 116 DRHNVAIVMLLRPVAPRGPSTEALGPLLCVVNTHLLFNPRRGDVKLAQLAILLAEIDRAV 175

Query: 200 ESLVP------FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           +S          ++ GDFN   +           ++           ++         R 
Sbjct: 176 QSQKARGMSCNLIMCGDFNSVPHMPLYQLITTGQLNYQGLPAWKISGQEDLSYRTSYRRL 235

Query: 254 KIPI 257
             P+
Sbjct: 236 FAPL 239


>gi|221220202|gb|ACM08762.1| Deoxyribonuclease gamma precursor [Salmo salar]
          Length = 294

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 14/185 (7%)

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              L  SY     K     A  R    L        +  L +        DS++      
Sbjct: 55  FVKLTHSYQYKDNKVGDEDAFAREPYILRFTCLNTVLKDLVLIPVHTKPEDSVKELDKLY 114

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             +   + +W               +I GDFN   +Y+   D     I  ++       +
Sbjct: 115 DVVKVVKKKW----------KTDHIMILGDFNADGSYVTKGDMTNIRIRSDEKFHWVIGD 164

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPI 298
                    N      I   +   +    ++  S     +++    S+   L  SDH P+
Sbjct: 165 DVDTTANTSNDHTYDRI--VMYGDDMLNAMVPNSAKPFNFHKAFRLSKAMALSISDHYPV 222

Query: 299 SIDYD 303
            ++  
Sbjct: 223 EVELT 227


>gi|50310815|ref|XP_455430.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644566|emb|CAG98138.1| KLLA0F07733p [Kluyveromyces lactis]
          Length = 371

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/347 (10%), Positives = 85/347 (24%), Gaps = 62/347 (17%)

Query: 15  PCTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
                   +  ++++N+     +  Q    +             L  +      +DI+ L
Sbjct: 25  SIQGPFNDRFTMLTYNMLSPYYMWPQVYTYVKDEYKDWDYRHRLLEHELFYKYKSDIICL 84

Query: 72  QEMGSYN----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQ 126
           QE+ + +       ++  +  +   ++ +    +  +         I     K   +   
Sbjct: 85  QELTTNDYNEFWKKQMMNRMNYGSNFTAKTPPKYWTKPLECMDGVGIFYNLDKFEYLFSS 144

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEING-------------------------------- 154
           S  L     +F +          + +                                  
Sbjct: 145 SLYLNDLVGTFDQQELHYLTHHNITLTNGAGDVIGEDSLYNVAKARNQVCLFVMLRHRES 204

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           K I V+      + + +            L +  + L   I     S V  + +GDFN  
Sbjct: 205 KSIIVVINTHLYWKYDEVKLVQCLIIMRKLQRIIKGLLMGIEGVTYSNVKILFSGDFNSS 264

Query: 215 INYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            + L                  +     +  +             C +    + K   DY
Sbjct: 265 RDSLVIKFLNGKIIKHGDINLQNPMRAYLSHSIYDDIPEDAYVHTCYSG---KLKGIFDY 321

Query: 260 FVMDQNAYKFLIQESF----SEILYNEDDIKSRGKRLSDHCPISIDY 302
                  ++     S      E+ +  D         SDH P+  + 
Sbjct: 322 IWFHPGDFEVEKVLSGQEVSKELTHLNDFGLPNKYHPSDHIPVLTEL 368


>gi|47210434|emb|CAF92416.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 920

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/364 (10%), Positives = 95/364 (26%), Gaps = 83/364 (22%)

Query: 16  CTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            +  ++    ++ +N+  +  + ++      +           + Q     +ADI+ LQE
Sbjct: 532 ASLPLSALFTVMCYNVLCDKYATRQLYGYCPSWALSWDYRKKNIMQEILGCNADIISLQE 591

Query: 74  MGSYNAVAKVFPKNTWCIF--YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           + +        P+     +  + + +    +  +S+       A+  K  +    S    
Sbjct: 592 VETEQYYNYFLPELKEQGYDGFFSPKSRARTMSESDRKHVDGCAIFYKTEKYDPLSLFKF 651

Query: 132 GAKDSFS--------------------------RAGNRRAVELLVEINGKKIWV------ 159
                 +                             +   V +L+E+  + + V      
Sbjct: 652 DLSGFSAVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLEVRKEMLEVSSGKSA 711

Query: 160 -------LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD------WITQKKESLVPFV 206
                  L +      +     +       +   + + + D       ++  + + +P V
Sbjct: 712 HGMDKQLLLVANAHMHWDPEYSDVKLVQTMMFLSEVKNIVDKASRSFKLSSGENNAIPLV 771

Query: 207 IAGDFNRKINYLGNNDDF----------WKTIDPNDSLIRFPKEKDSRC----------- 245
           +  D N   +                  +K +  +DSL +F     +             
Sbjct: 772 LCADLNSLPDSGVVEYLSTGAVDCTHKDFKELRYSDSLTKFNCNGKNGTSNGMITHGFKL 831

Query: 246 ----------NANKNLRNKIPIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       N     K  IDY    +   N    L       ++ N           
Sbjct: 832 KSAYENGLMPYTNYTFDFKGVIDYVFYSKPHLNVLGILGPLDPHWLVENNVTGCPHPHIP 891

Query: 293 SDHC 296
           SDH 
Sbjct: 892 SDHF 895


>gi|311257118|ref|XP_003126958.1| PREDICTED: sphingomyelin phosphodiesterase 3-like [Sus scrofa]
          Length = 656

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 74/299 (24%), Gaps = 67/299 (22%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A AK+  +    +        +       S   +++ +    +   
Sbjct: 355 NLDFLCLQEVFDKRAAAKLKEQLHGYFEYILYDVGVYGCHGCCSFKCLNSGLFFASRYPI 414

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y             ++ A+ L V++         +   S   L +L       C 
Sbjct: 415 MDV-AYHCYPNGRLSDSLASKGALYLKVQVGSTPQDQRIVGYISCTHLHALPEDSDIRCE 473

Query: 183 LLSQQAQWLKDWITQKKESLVPF--------VIAGDFNRKINYLG--------------- 219
            L+    WL D+      S            +I GDFN                      
Sbjct: 474 QLNMLQDWLADFRKSTSSSSTANPEELVAFDIICGDFNFDNCSSDDKLEQQHSLFTRYKD 533

Query: 220 --------NNDDFWKTIDPNDSLIRFPKEKDSR----------------CNANKNL---- 251
                          T+   D L                             +K+     
Sbjct: 534 PCRLGPGEEKPWAIGTLLDKDGLYDEEVCTPDNLQKVLESEEGRREYLAFPTSKSPGGGQ 593

Query: 252 --------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    N   IDY +  +       +    E  +           L+DH P+++  
Sbjct: 594 KGRKDLLKGNGRRIDYMLHGEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVAMRL 647


>gi|225351181|ref|ZP_03742204.1| hypothetical protein BIFPSEUDO_02771 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158637|gb|EEG71879.1| hypothetical protein BIFPSEUDO_02771 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 344

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/286 (9%), Positives = 71/286 (24%), Gaps = 57/286 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           ++   + R+++ N                     ++   +    K  D  ++ LQE+   
Sbjct: 114 SAKHGRFRVMTLNCRF----------------GRANAAAIVSAVKKHDIAVLALQELTDD 157

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                     +        R +  SK  ++N     + +R +    +     ++ A D  
Sbjct: 158 LVAQLDASGLS---DLLPYRQLGESKG-TDNGGFNGVWIRIE-PSDMSPVTAVIPAADVP 212

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                  ++        + I  +  H KS        +                   +  
Sbjct: 213 GVCFPIDSM--------RGITFVSAHPKSPMRGCREWSAGIIGLGE-----------LAT 253

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            ++     V+ GD N   ++                     +        +     +I +
Sbjct: 254 TQKQGDITVVLGDLNSGTDHPSFRKLLNAGFKDAALCEAKGRHA---TFPSWLPWPRIIL 310

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+ +  +      +     E               SDH  ++    
Sbjct: 311 DHVLFTKGLDASDVSSFCVE--------------GSDHLALAATLT 342


>gi|294654552|ref|XP_002769996.1| DEHA2A06578p [Debaryomyces hansenii CBS767]
 gi|199428970|emb|CAR65373.1| DEHA2A06578p [Debaryomyces hansenii]
          Length = 523

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 80/266 (30%), Gaps = 29/266 (10%)

Query: 11  FFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYTLLRQYAKNLDAD 67
              +P   +      ++++S+NI   +           +  + ++   +L    K+ DAD
Sbjct: 97  LLELPNNVASDDSFKIKIMSYNILAQALIRRKLFPTSGNALKWSTRSQVLLSEFKHYDAD 156

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           I+ LQE      +  +   + W              R    +   AIA +        QS
Sbjct: 157 ILCLQE------LDFIQYNSYWRKELGKLGYDMKYYRADTKNHGLAIAFKSDKFICKHQS 210

Query: 128 YPLLGAKDSFSRAGNRRAV-------------ELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           +     K++      R A              ++L + +      + I      +     
Sbjct: 211 FMYYD-KETSGELRPRTATQNIGFLACLEFTPDILTKYSNISRNGIIIGTTHLFWHPFGT 269

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPND 232
              +    L+ ++ +  +  +   K +   +    AGDFN +           K     +
Sbjct: 270 FERTRQTYLILKKFKEFRSTMNTLKGNDDDWYGFFAGDFNSQPFDAPYLSITAKPAHYAE 329

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPID 258
                         + +  +N+  ID
Sbjct: 330 RARIVLGCSL----SYQYSKNRGVID 351


>gi|124441686|gb|ABN11482.1| DNA lyase [Ascosphaera apis]
          Length = 533

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/288 (11%), Positives = 65/288 (22%), Gaps = 69/288 (23%)

Query: 64  LDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           L+ADIV LQE  +   +    +     W  F+S  +         N       A R    
Sbjct: 5   LEADIVVLQETKIQRKDLRDDMVLVPGWDCFFSFPKYKKDGITGINPSTTKDTAFR---- 60

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                  P       +          +  E    +   + +  ++F  +           
Sbjct: 61  -----DLPSHEQIGGYPSEEQLNLSLVDAETLDSEGRCVILEFQAFVLIGVYLPAVRNEL 115

Query: 182 S--LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------------Y 217
                    +  +  +          ++AGD N   +                       
Sbjct: 116 RDDFRLGFLRVFECRVRNLIALGKRIIVAGDLNISRDVQDSASALADVLGERLSREQYIS 175

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-----------------------NK 254
             +   F + +  +          +++C      R                         
Sbjct: 176 TPSRALFNELVTDSSDYDSSEPNNNAQCVLWDICRDFHPSRKGMFTCWDMKTNARPGNFG 235

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             IDY +   N   + +     +               SDHCP+    
Sbjct: 236 SRIDYILCSLNIRDWFVAADAQQH-----------LMGSDHCPVFAVL 272


>gi|169605269|ref|XP_001796055.1| hypothetical protein SNOG_05657 [Phaeosphaeria nodorum SN15]
 gi|111065601|gb|EAT86721.1| hypothetical protein SNOG_05657 [Phaeosphaeria nodorum SN15]
          Length = 399

 Score = 55.7 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 91/303 (30%), Gaps = 40/303 (13%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK---NLDADIVFLQEM 74
               + +RL+SWNI+ L           + +R  +    + +         A +VFLQEM
Sbjct: 113 PIDPKAIRLISWNIDVL--------IGFAEQRMRAALRYMHEVVTSTPAETAAVVFLQEM 164

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           G  +       +     F  TE      +        T I V ++         P +   
Sbjct: 165 GQSDLRQIREAEWVKQRFNITEFDH---RNWLGPLYGTTILVDRRLTIKNVFRVPWVSKF 221

Query: 135 DSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           D    + +            ++ + + + HL+S                +   Q      
Sbjct: 222 DRDGLSVDIALSSAQSGNGNREVLRLCNTHLESLVADP----------PVRPLQLAAASK 271

Query: 194 WITQKKESLVPFVIAGDFNR-------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            +   +  +   +IAGDFN          +     D + +     DS   F         
Sbjct: 272 ILK--ETGVASALIAGDFNAIQPFDRTLHSENDLKDAYLELGGQEDSDDGFTWGYQVPQW 329

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFL-----IQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     +D  ++  +          +    +E   ++   +  G  ++DH  +  D
Sbjct: 330 MRDKFG-CSRMDKILLRGDVRPKSFERIGVDVKVAEEERDKVQKEIEGGWVTDHYGVMGD 388

Query: 302 YDF 304
           ++F
Sbjct: 389 FEF 391


>gi|282164884|ref|YP_003357269.1| hypothetical protein MCP_2214 [Methanocella paludicola SANAE]
 gi|282157198|dbj|BAI62286.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 263

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 71/280 (25%), Gaps = 64/280 (22%)

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               + L  DI+  QE+            + +    S     +           + +   
Sbjct: 12  VSAIRELSPDIIAFQEVT-------ALTLSKYIEELSKIGFTHFIDSFQFVKYSSRLKGP 64

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
           ++   ++   +P++            + +  L+E     I +   H+ +    D ++   
Sbjct: 65  RRYGELVASRWPIMEFPGFLKVPWQEKVLSCLIESPEGTIELHTAHVPNGSTNDWIKIRT 124

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------- 220
                      + +   +  +  +    ++ GDFN     L +                 
Sbjct: 125 ----------LEGIYKGLACQSHNHR--ILCGDFNTPQKELPDGKIITWGQYEKANGDYA 172

Query: 221 ------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------RNKIPIDYFVM 262
                         +  + +   D    + K                  R     D+   
Sbjct: 173 LCKYWGKRWDKGERNVLEGLAQFDLADVYRKLNGYVTRDFSWYTKRRGKRIGRRFDHVFA 232

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +    + +  +   L          K LSDH PI + +
Sbjct: 233 SSSL--KVKECRYLHELRR--------KGLSDHSPIEVTF 262


>gi|126666553|ref|ZP_01737531.1| Exonuclease III [Marinobacter sp. ELB17]
 gi|126628941|gb|EAZ99560.1| Exonuclease III [Marinobacter sp. ELB17]
          Length = 268

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/271 (8%), Positives = 61/271 (22%), Gaps = 54/271 (19%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
            +    DAD++ +Q+  M +Y    +      +  ++                       
Sbjct: 21  DWIAGQDADVICVQDHRMRAYEVEDRQLVPEGYEAYFIDGENNEDGGVGIYT-------- 72

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                    + +P        +   +R    +  + +   +  +          D +   
Sbjct: 73  ---------RHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLAPCALGLEDDPIGGD 123

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---------------GNN 221
                             + +       F++  +     +                  + 
Sbjct: 124 DLTVLDHKDDFMDAFGVHMQKTLRKRRQFIVCANLQSAHHVTDASPRYHKLDVSGFLPHE 183

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQ 272
             +   +      I   ++ + + N                   +DY +      K +  
Sbjct: 184 RAWLDRLFEEMGSIDAFRDINKQSNQFTWWPEWASGWRKQSGIRVDYQIATPGIRKTIQD 243

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                             R SDH P+ +DYD
Sbjct: 244 GWI-----------DDDTRFSDHAPVVMDYD 263


>gi|119026409|ref|YP_910254.1| hypothetical protein BAD_1391 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118765993|dbj|BAF40172.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 397

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 83/283 (29%), Gaps = 70/283 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+++ N                 K+  +D   + +  K    +++ LQE+ S++ + ++ 
Sbjct: 179 RIMTLNT----------------KQGAADAGKIVETVKAEHVEVLALQEV-SWSLLDRLA 221

Query: 85  PK--NTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFSRA 140
                 +  +  T +   H     N     A    V++  + V   S P           
Sbjct: 222 NAGIANYLPYSVTAQQTWHDNGGVNVLYSAAPMEDVKQNLIPVESSSVP----------- 270

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                    ++  G K+    +H  S    +      S            L+ +      
Sbjct: 271 ------AATIDFAGTKVRFGSVHPFSPRPSNQGLWNRSLDS------LAQLQHY------ 312

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
               +V+ GDFN   ++       ++ +  +  L    +  +        +     ID+ 
Sbjct: 313 -DSLYVLMGDFNSTWDHAS-----FRYLLGSRFLDSGEQAGEGLHMTYPAMLPVAEIDHI 366

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                           +      D++++    SDH  +    +
Sbjct: 367 --------------VHDKGVVVGDLETKHIPGSDHRALLATLE 395


>gi|328856131|gb|EGG05254.1| hypothetical protein MELLADRAFT_36888 [Melampsora larici-populina
           98AG31]
          Length = 459

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/289 (11%), Positives = 66/289 (22%), Gaps = 63/289 (21%)

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V LQE+  Y+    +  +              +SK   +  +   +A+  +   +   
Sbjct: 2   DVVALQELWVYHDFCVIRDRAKEGGLI-------YSKWFHSAALGAGLAILSRYPIIESH 54

Query: 127 SYPLLGAKDSFSRAGNRRAV-----ELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPS 180
            Y       +         V       L+++    ++ V   HL +   + + E      
Sbjct: 55  FYAYALNGHALHFIEGDFFVGKAVGSCLLDVPLVGQVEVFSTHLYAPHDVPAPEWKR--- 111

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFPK 239
            +  + QA  L        E      + GD N   + L          +  +        
Sbjct: 112 -AHRTAQAWELGKLAKASAERGRTVFVCGDLNSVPSSLPITILQAHGQLRDSWQSSHPTN 170

Query: 240 EKDSRCNANKNL-----------------------------RNKIPIDYFVMDQ------ 264
                 N                                       +DY +         
Sbjct: 171 LSCITNNEASYRNAIKEEGITCDSLINTFTASKNAANRGAKGFGKRLDYILFRPAAKRIT 230

Query: 265 ----------NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                           +       +   D I   G   SDH  +   + 
Sbjct: 231 QRDKHGRCQTEFIDDQVINCDDCHVTLTDPIPVFGYSYSDHFALQATFT 279


>gi|225858419|ref|YP_002739929.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae 70585]
 gi|225720364|gb|ACO16218.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae 70585]
          Length = 333

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATKIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  K    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNALPPFKRGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|312222726|ref|NP_001185949.1| protein angel homolog 2 isoform 2 [Mus musculus]
 gi|74177577|dbj|BAE38898.1| unnamed protein product [Mus musculus]
 gi|74187259|dbj|BAE22620.1| unnamed protein product [Mus musculus]
          Length = 522

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 20/207 (9%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 144 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 203

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++   ++              AI  +     +L  +      +D   
Sbjct: 204 YGTEIRPSLESLGYHCEYKMKT-----GRKPDGCAICFKHSRFSLLSVNPVEFCRRDIPL 258

Query: 139 RAGNRRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
              +   + LL++          I + + HL                 + L+     + +
Sbjct: 259 LDRDNIGLVLLLQPKIPRAASPSICIANTHLLYNP------RRGDIKLTQLAMLLAEIAN 312

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN 220
              +K  S  P V+ GDFN        
Sbjct: 313 VTHRKDGSSCPIVMCGDFNSVPGSPLY 339


>gi|330841059|ref|XP_003292522.1| hypothetical protein DICPUDRAFT_50499 [Dictyostelium purpureum]
 gi|325077218|gb|EGC30945.1| hypothetical protein DICPUDRAFT_50499 [Dictyostelium purpureum]
          Length = 547

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 91/350 (26%), Gaps = 79/350 (22%)

Query: 17  TASVAQKVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +++   + +++++NI     +S+     L   ++K  T    LL       DAD+  +QE
Sbjct: 194 SSNKENQFKIITFNILADLYVSDHYYSYLPPYALKWNTYRSHLLIPQILQYDADVACMQE 253

Query: 74  MGS-----------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND------- 109
           + +                    +           +     +     R +          
Sbjct: 254 VDTMYVQLFSEMNKKGYQHFPEYLDSKTNTPMQLKYREGCFIFFKKSRFNFIKGLPIDYR 313

Query: 110 -IHTAIAVRKKNVRVLQQSYPL---LGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHL 164
            I     +  + V  L         +G     S    R  +  +  ++  +K+  + IHL
Sbjct: 314 TIEQGNLIDTETVSKLMTDQIFKLVIGTHLHDSSHHVRHCLVLVEDKVTKEKMIFVSIHL 373

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDD 223
                     + Y   C  +   +  L+ +I   K +  +P +I GDFN   +       
Sbjct: 374 YWGS-----YSVYQIQCVQIHLFSLILRKFIKDNKLDINIPIIICGDFNSSPDSSVYQYL 428

Query: 224 FWKTIDPNDSLIRFP--------------------------------------KEKDSRC 245
              ++  +D  +                                         +      
Sbjct: 429 TTGSMSNDDPNLTNSGQYPTASFSNTDTDNNSDESNDINSISHPFKLTSAYGLRPDGEPK 488

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                      ID   +        +          + +I       SDH
Sbjct: 489 FTTTTKAFCGNIDQIYVSDRFK---VNTLLEVGEKQDYNILPSLSLASDH 535


>gi|190408129|gb|EDV11394.1| DNase [Saccharomyces cerevisiae RM11-1a]
 gi|256270016|gb|EEU05262.1| Ngl3p [Saccharomyces cerevisiae JAY291]
          Length = 506

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 65/221 (29%), Gaps = 9/221 (4%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +  V+++++N    TL  ++          +      +L    K    D+V LQE+
Sbjct: 102 VTQDSLDVKIMTYNTLAQTLIRRD-FFPESGPALKWHKRSKVLVHELKKYRPDVVSLQEV 160

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                N   + F K  + + +       H    + N+    +            +  ++ 
Sbjct: 161 DYNELNFWQENFHKLGFDMIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVIS 220

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A+          ++      +     ++  +   F     +      S  +     Q ++
Sbjct: 221 ARTRTKNIALIISLYFKGITDSSSRGIIVANTHLFWHPFGVFERLRQSYLV----LQKIQ 276

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +     K +    ++ GDFN +           + +     
Sbjct: 277 EIKACSKYNGWHSLLMGDFNTEPEEPPYLAITKRPLILKGP 317


>gi|168492742|ref|ZP_02716885.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae CDC3059-06]
 gi|183576990|gb|EDT97518.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae CDC3059-06]
          Length = 333

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNVLPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|90420840|ref|ZP_01228745.1| possible endonuclease/exonuclease [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334815|gb|EAS48587.1| possible endonuclease/exonuclease [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 347

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 68/249 (27%), Gaps = 51/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             +R+       DIV LQE G            T+           H    S       +
Sbjct: 133 EAIRR-IAAEAPDIVTLQETGRDWQARLETLSATY----------PHQFYCSGPFAQGNV 181

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  K   V +  Y  +    +  R          ++ NG    ++  HL+         
Sbjct: 182 AILSKRPFVDETGYCDVENGFAARR----------IDFNGTVATIVSQHLQWPWPFGH-- 229

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      +Q   L++ +   +    P +IAGDFN              +     + 
Sbjct: 230 ----------WRQLADLQETLGLLRG---PVLIAGDFNAAPWSAALETYAAASGTTPVTG 276

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           I F     +           +PID+ +                       + +     SD
Sbjct: 277 IGFTWLSRA-LPGALAPYIGLPIDHVLATPGIVIR--------------KLGTLAPTASD 321

Query: 295 HCPISIDYD 303
           H PI+  + 
Sbjct: 322 HMPIAATFS 330


>gi|324503824|gb|ADY41654.1| Protein angel 2 [Ascaris suum]
          Length = 741

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 64/214 (29%), Gaps = 20/214 (9%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSL--------WKNSVKRTTSDYTLLRQYAK 62
           + +   + +    +R+ S+N+   +                ++   +      LL +   
Sbjct: 370 WVVAQTSVTKGAPIRICSYNVLCQNTIPKTPYLYKHLASMERSYQLQWEYRSNLLARELL 429

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
            + ADI  LQE+   +      P      +    +               AI  R     
Sbjct: 430 MISADIFCLQEVQEDHFHNFYLPVLARAGYKGEFKKRTREM-----FDGCAIFYRFPMEL 484

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           +  Q        ++     N   +      ++GK+I V + HL         +       
Sbjct: 485 LAYQPIEYFLGVNTVLDRDNIGQLARFKETLSGKEICVANTHLLFN------KQRGDVKL 538

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
           + L+     L      +     P+VI GDFN + 
Sbjct: 539 AQLAVLLANLDKECGPESTRKCPYVICGDFNMQP 572


>gi|148983963|ref|ZP_01817282.1| hypothetical protein CGSSp3BS71_07514 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147924110|gb|EDK75222.1| hypothetical protein CGSSp3BS71_07514 [Streptococcus pneumoniae
           SP3-BS71]
 gi|301799636|emb|CBW32193.1| putative integral membrane protein (possible nuclease activity)
           [Streptococcus pneumoniae OXC141]
          Length = 333

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNVLPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|50925658|gb|AAH79074.1| Dnase1l1 protein [Rattus norvegicus]
          Length = 307

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 71/292 (24%), Gaps = 33/292 (11%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  V+A +  L+          R+ ++N + L+                S    L Q  
Sbjct: 19  MRGLVVASLLILLVGGT---DAFRICAFNAHRLTLT---------KVIKESVMDTLVQIL 66

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                DI+ LQE+   +    +F         S   L +     S          R    
Sbjct: 67  ARC--DIMVLQEVVDSSQNTVLFLLQKLQSSKSYSFLNSSLLGRSTYKEKYVYIYRSDKT 124

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLENTYSPS 180
           +VL          +       R        +  K +  V+ + L +       E      
Sbjct: 125 QVLN-----FYQYNDTEDIFAREPFVAQFTLPSKILPSVVLVPLHTTPKDVEKELNALYD 179

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             L   Q                  ++ GDFN     L         +           +
Sbjct: 180 VFLDVSQRWQ-----------NENVILLGDFNADCASLAKKRLNSLLLRTKAGFHWVIPD 228

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +              I   +  Q   K L   +  +        +   ++L
Sbjct: 229 GEDTTVRASTNCTYDRI--VMHGQGCQKLLKAAATFDFPRRFQLTEEEVEKL 278


>gi|182436077|ref|YP_001823796.1| hypothetical protein SGR_2284 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178464593|dbj|BAG19113.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 400

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 58/274 (21%), Gaps = 46/274 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             VR+VSWN                    ++D      + + LDAD+  LQE        
Sbjct: 111 GAVRVVSWNTQH--------------WCQSTDPEPFYAFLRGLDADVYLLQEYHHDEF-- 154

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                +        ER +  +       I   +    +   V                  
Sbjct: 155 -----DGTYRLIDDERRLRETFPGHRAVIARGLITLSRLPVVATVETAARRTLRVDLEMP 209

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +     ++   I V    +               +           +  +      
Sbjct: 210 GDGRILATFNVH---IPVQLRLISPLRADFYRAVRTRAADREREY-----RGLLADVAGC 261

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P +IAGDFN                      +             +       +D+ +
Sbjct: 262 PHPALIAGDFNTTAAIGDARRIA----RLGSDAVALSGRLCPTSWQARPGLRWWRLDWVL 317

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
               A                       + LSDH
Sbjct: 318 TTPGARVHR-------------YRFRDPRGLSDH 338


>gi|259148455|emb|CAY81700.1| Ngl3p [Saccharomyces cerevisiae EC1118]
          Length = 506

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 65/221 (29%), Gaps = 9/221 (4%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +  V+++++N    TL  ++          +      +L    K    D+V LQE+
Sbjct: 102 VTQDSLDVKIMTYNTLAQTLIRRD-FFPESGPALKWHKRSKVLVHELKKYRPDVVSLQEV 160

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                N   + F K  + + +       H    + N+    +            +  ++ 
Sbjct: 161 DYNELNFWQENFHKLGFDMIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVIS 220

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A+          ++      +     ++  +   F     +      S  +     Q ++
Sbjct: 221 ARTRTKNIALIISLYFKGITDSSSRGIIVANTHLFWHPFGVFERLRQSYLV----LQKIQ 276

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +     K +    ++ GDFN +           + +     
Sbjct: 277 EIKACSKYNGWHSLLMGDFNTEPEEPPYLAITKRPLILKGP 317


>gi|291450889|ref|ZP_06590279.1| endonuclease/exonuclease/phosphatase [Streptomyces albus J1074]
 gi|291353838|gb|EFE80740.1| endonuclease/exonuclease/phosphatase [Streptomyces albus J1074]
          Length = 252

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 65/278 (23%), Gaps = 50/278 (17%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +S+N+ +L                  D   + +  +    D+V +QE   +    K   +
Sbjct: 16  LSYNVRSL----------------RDDPVAVARVVRACAPDLVLVQEAPRFFRWRKPLGR 59

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                          +   +        ++R     V  +  PL            R   
Sbjct: 60  LAAASGLVVLGGGAPAAGPALL-----CSLRAGVESVHDELLPLTPGLHR------RGFS 108

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
             +V     ++ VL  HL             S        Q   + + +          V
Sbjct: 109 TAVVRFGTVRLGVLSCHL-------------SLQKDERYAQGGMVLERLAALGVEHA--V 153

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
             GD N +           +  D         +   +  + +        ID        
Sbjct: 154 AGGDINERPKGRTFRRLAAELQDGWAVRPWGGEYTSTPADPH------QRIDAVFATPGI 207

Query: 267 YKF--LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +    +         +    R +DH P+    
Sbjct: 208 EVLGCGVPAPGTAAPGVPPFTEDDLLRATDHLPVLAAL 245


>gi|290989101|ref|XP_002677183.1| predicted protein [Naegleria gruberi]
 gi|284090789|gb|EFC44439.1| predicted protein [Naegleria gruberi]
          Length = 422

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 71/215 (33%), Gaps = 18/215 (8%)

Query: 23  KVRLVSWNINT---LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YN 78
              L+++NI      + +EG S   +     T     L    +  ++DI+ LQE+     
Sbjct: 21  SFTLLTYNILAQSLFNRREGFSYCNHKAALWTVRRENLLNEIEFYNSDIICLQEVDKYEE 80

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                  +  +  FY  +   N SK         A A + +   +++    L+  +   +
Sbjct: 81  FWKDKLKELGYSSFYHAQY--NPSKNFREMPYGLAFAFKSEKFELVESEVILMEQELLSN 138

Query: 139 RAGNRRAV------ELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSL-LSQQA 188
                 +       +  ++ +G   +   +     +    + +    + P C+    +Q 
Sbjct: 139 SQHLNISTDESVLEKEEIKHSGNIAQIFVLKSKESEDGLLITNSHLFWRPECNYVRLRQL 198

Query: 189 QWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNN 221
             L         + S  P +  GDFN   N +   
Sbjct: 199 MLLIAHTLSVNHRYSNYPVLSVGDFNTTPNSIIYK 233



 Score = 39.9 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 47/158 (29%), Gaps = 6/158 (3%)

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
           ++I    +  L+ +     F +          +   +Q     +   +K+   +  +I+ 
Sbjct: 259 IDIEDITLEDLERYFNHVTFCEEKFIQDLKDSNTPEEQIFEQLEMEKKKRMKSIKELISH 318

Query: 210 DFNRKINYLGNNDDFWKTI--DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM----D 263
                 ++      + K    D  +  + F  + +           K  +DY  +     
Sbjct: 319 FVKNYPSFRSMYSWYGKLNPQDHEEMRVHFDWDHNEVLYTMYTPDFKSTLDYIFVWNTQQ 378

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +  +     S       ++      K  SDH  + +D
Sbjct: 379 HSKIELKRLLSIPLPKDIDETCLPSEKHSSDHFSLMVD 416


>gi|251792167|ref|YP_003006887.1| hypothetical protein NT05HA_0373 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533554|gb|ACS96800.1| endoribonuclease L-PSP [Aggregatibacter aphrophilus NJ8700]
          Length = 286

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 85/285 (29%), Gaps = 65/285 (22%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              K RL+ WN++           K        +   L Q       D + LQE  +   
Sbjct: 63  QQDKFRLLIWNVH-----------KELDHGWQEELENLVQ-----GKDFLLLQEATNTQN 106

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +A+ F         S      ++   +     + + +  K        +   GA+     
Sbjct: 107 LAEKFS--------SQFPTALYATAFAYLTQQSGVQILSKFSP----HFYCAGAEVEPWI 154

Query: 140 AGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +    +     NG+ + V+++HL +F    +                Q L   ++  
Sbjct: 155 RIPKVGEAMTFPLANGQALLVVNVHLINFEINLAAYR-------------QQLSRLMSLV 201

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P V+AGDFN   ++ G      + +     L      +D R            +D
Sbjct: 202 NRHHGPIVLAGDFN---SWNGYRLALIRELAKQYDLQEVNFSEDHRLRFLDYP-----LD 253

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +                  +     +R    SDH P+ ++ D
Sbjct: 254 HVFLRG---------------LSVTSATTRPTEASDHAPLLVEVD 283


>gi|219517925|gb|AAI43632.1| Unknown (protein for MGC:177161) [Homo sapiens]
          Length = 647

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 82/293 (27%), Gaps = 65/293 (22%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNN--------- 221
           +   Q   L+DW+   ++S                V+ GDFN       +          
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFT 530

Query: 222 ---------------------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251
                                      D+  K ++  +    +     S+ +  K     
Sbjct: 531 HYRDPCRLGPGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSSGQKGRKEL 590

Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              N   IDY +  +       +    E  +           L+DH P+++  
Sbjct: 591 LKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVAMRL 638


>gi|323347254|gb|EGA81528.1| Ngl3p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 503

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 65/221 (29%), Gaps = 9/221 (4%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +  V+++++N    TL  ++          +      +L    K    D+V LQE+
Sbjct: 102 VTQDSLDVKIMTYNTLAQTLIRRD-FFPESGPALKWHKRSKVLVHELKKYRPDVVSLQEV 160

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                N   + F K  + + +       H    + N+    +            +  ++ 
Sbjct: 161 DYNELNFWQENFHKLGFDMIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVIS 220

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A+          ++      +     ++  +   F     +      S  +     Q ++
Sbjct: 221 ARTRTKNIALIISLYFKGITDSSSRGIIVANTHLFWHPFGVFERLRQSYLV----LQKIQ 276

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +     K +    ++ GDFN +           + +     
Sbjct: 277 EIKACSKYNGWHSLLMGDFNTEPEEPPYLAITKRPLILKGP 317


>gi|323336135|gb|EGA77406.1| Ngl3p [Saccharomyces cerevisiae Vin13]
          Length = 506

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 65/221 (29%), Gaps = 9/221 (4%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +  V+++++N    TL  ++          +      +L    K    D+V LQE+
Sbjct: 102 VTQDSLDVKIMTYNTLAQTLIRRD-FFPESGPALKWHKRSKVLVHELKKYRPDVVSLQEV 160

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                N   + F K  + + +       H    + N+    +            +  ++ 
Sbjct: 161 DYNELNFWQENFHKLGFDMIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVIS 220

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A+          ++      +     ++  +   F     +      S  +     Q ++
Sbjct: 221 ARTRTKNIALIISLYFKGITDSSSRGIIVANTHLFWHPFGVFERLRQSYLV----LQKIQ 276

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +     K +    ++ GDFN +           + +     
Sbjct: 277 EIKACSKYNGWHSLLMGDFNTEPEEPPYLAITKRPLILKGP 317


>gi|316973068|gb|EFV56700.1| sphingomyelin phosphodiesterase 2 [Trichinella spiralis]
          Length = 280

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 13/199 (6%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+++ N   +                      + +       DIV LQE+ S N    
Sbjct: 6   QLRVLTLNCWGIPLPFPFGSAD-----RKVRIKEIAKELATGKYDIVSLQEIWSENDFNM 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +       + YS      ++           I     +   L      +   D F     
Sbjct: 61  IHDAVRLVMPYSFYFHNGYAGSGVCVFSKGIILETLMHRYSLNGYVHHIHRGDWFGGKM- 119

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  ++ +G  I V   H+ +    D          +    QA  L  ++    ++ 
Sbjct: 120 --VGLCRIQFSGININVYATHIHAEYNHDEDVY-----LAHRVVQAFELGQFMRNTMQNC 172

Query: 203 VPFVIAGDFNRKINYLGNN 221
              ++ GD N +   LG +
Sbjct: 173 EMAILMGDLNLRPTDLGYD 191


>gi|171911706|ref|ZP_02927176.1| hypothetical protein VspiD_11040 [Verrucomicrobium spinosum DSM
           4136]
          Length = 456

 Score = 55.7 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 82/303 (27%), Gaps = 62/303 (20%)

Query: 16  CTASVAQKVRLVSWNINTL-------------SEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            T ++   +R+ +WNI                +    +   K +   +     +LRQ  +
Sbjct: 3   STPALGPVLRVATWNIEKSLNINQVAKALTSPAAYTSMINEKRAPAGSHLREEMLRQRQR 62

Query: 63  NLDADIVFLQE----------MGSYNAVAKVFPKNTWCIFYS--------------TERL 98
              ADIVFLQE          + +   +A     N      +                  
Sbjct: 63  LASADIVFLQEMDIGVNRSGYVDTARTLAHAMGMNYAYAPQALEVDPVLLGQEPRPDSPA 122

Query: 99  INHSKRDSNNDIHTAI---AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL------- 148
                   +   +  +   A+  +   V  +++ L      + +   +RA          
Sbjct: 123 GKPKYHSVDPAQYKGVFGSAILSRYPIVKVEAFQLKTQPYDWYKDEQKRADIAEHGRRVG 182

Query: 149 -----------LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL-SQQAQWLKDWIT 196
                       +++ G+  + +D+ +                   L   +   + + + 
Sbjct: 183 SALVFDNEITRELKVGGRNYFRVDVAVPGTPGGVVSLINNHLEIKTLPKHREAQMVEILG 242

Query: 197 QKKESLVPFVIAGDFNRKINYLGN---NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
             K    P ++AGD N   N +         W+ ID   S +                  
Sbjct: 243 YIKNIPHPVIMAGDHNSAPNDVSPTSVERVIWRQIDTPASFVSTASNVSGLVWGTMIPLY 302

Query: 254 KIP 256
           +  
Sbjct: 303 RER 305


>gi|332322149|emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 55.3 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 84/285 (29%), Gaps = 66/285 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++SWN+  L               + +  + LR++    +   VF+QE        K+
Sbjct: 1   MSVISWNVRGLG--------------SRAKRSSLRKHITKHEPTFVFIQETKMEEMPEKI 46

Query: 84  FP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                 +  + +       +S    +    +  A +   ++                   
Sbjct: 47  MRSIWKSDNVEWIISPSQGNSGGILSIWNTSFFAKKSSIIK------------------- 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  + +   +       + I++ + C             S+ ++    ++D+  +    
Sbjct: 88  -RHWIAIKGSLVSHNFDCILINVYNSCL-----------ASIRAEVWTEIRDFWKECA-- 133

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE------KDSRCNANKNLRNKI 255
            +P +I GDFN  +N            +                   S         +K 
Sbjct: 134 -LPSLIIGDFNEVLNSSERRSLIASQSEMTKFRDFVQNLQLLEIPSSSGGFTWFRGNSKS 192

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +D   ++              IL+    +    + LSDHCP+ +
Sbjct: 193 LLDRLFINPE----------WLILFPGLKLSLLMRGLSDHCPLLV 227


>gi|332202463|gb|EGJ16532.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA41317]
          Length = 333

 Score = 55.3 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNALPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|326928643|ref|XP_003210485.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
           subunit 6-like [Meleagris gallopavo]
          Length = 546

 Score = 55.3 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/342 (11%), Positives = 89/342 (26%), Gaps = 78/342 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             ++ +N+            K + ++       + Q   + +ADI+ LQE+ +    +  
Sbjct: 189 FSVMCYNV---------LCDKYATRQXXXXXKAIMQEILSCNADIISLQEVETEQYYSFF 239

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +     +       + ++  S  +       AI  + +   ++Q+           + 
Sbjct: 240 LVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANS 299

Query: 140 AGNRRAVELLVEINGKKIWV------------------------LDIHLKSFCFLDSLEN 175
            G+   +  ++  +   + V                        + +      +     +
Sbjct: 300 EGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGMEKQLVLVANAHMHWDPDYSD 359

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLV-------PFVIAGDFNRKINYL---------- 218
                  +   + + + D  ++  +  V       P V+  D N   +            
Sbjct: 360 VKLVQTMMFLSEVKNIIDKASRSLKPGVAGELGTIPLVLCADLNSLPDSGVVEYLSTGGV 419

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRC---------------------NANKNLRNKIPI 257
             N   +K +  N+SL  F     +                         N     K  I
Sbjct: 420 ETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKGII 479

Query: 258 DYFVMD-QNAYKFLIQESFSEILYNEDDIK--SRGKRLSDHC 296
           DY            I          E++I         SDH 
Sbjct: 480 DYIFYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHF 521


>gi|188992594|ref|YP_001904604.1| hypothetical protein xccb100_3199 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734354|emb|CAP52564.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 406

 Score = 55.3 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/383 (10%), Positives = 84/383 (21%), Gaps = 103/383 (26%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              ++ A  +R+ ++N +  S++ G  + +       +    +    + +  D+V L E 
Sbjct: 27  SAASTTAAPLRIATYNTSLYSDEAGGLVRELQGDSAHAR--KIAAVLQRVRPDLVLLNEF 84

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND------------------------- 109
             ++   +             +     +                                
Sbjct: 85  -DFDPAHRAADLFQQRYLQVAQPGGGDALSYPYRYLAPVNTGVPSGLDLDNNGSVGGDGR 143

Query: 110 -------------IHTAIAVRKKNVR------------VLQQSYPLLGAKDSFSRAGNRR 144
                            + V  +                      L     +  R     
Sbjct: 144 SRGNDAWGYGLHPGQYGMLVLSRYPIDAQAVRSFQLLKWSALPGALRPVDPATRRPFYND 203

Query: 145 AVELLVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           AV   + ++ K             +  L  H     F  + +   + +   L     +L 
Sbjct: 204 AVWAQLRLSSKSHWDVPVRTPLGVVHALVSHPTPPVFDGAEKRNAARNHDELQLWRAYLD 263

Query: 193 DWITQK------------KESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPK 239
           +                  E    FVI GD N    +  G ++     I+    L     
Sbjct: 264 NAADTTRWLCDDQGRCGGLERDAHFVILGDLNNDPIDGAGRHEAIRALINHPRVLKYPTP 323

Query: 240 EKDSR---------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                                               + +DY +             F   
Sbjct: 324 VSAGGPEKTAEYAAQGIAHTGDPHQVTGDFGPQAGTMRLDYVLPSHQFT-LAGSGIFWPA 382

Query: 279 LYNEDDIKSRGKRLSDHCPISID 301
             + D   + G   SDH  + +D
Sbjct: 383 GSSPDAAIADG---SDHHAVWVD 402


>gi|270013481|gb|EFA09929.1| hypothetical protein TcasGA2_TC012081 [Tribolium castaneum]
          Length = 812

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 85/314 (27%), Gaps = 56/314 (17%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEM 74
           +  Q+    + +WN+N       +  W +                     D+  + LQE+
Sbjct: 173 TQQQEFSIFVGTWNVNGQPPSVSLRPWLS---------------FDEEPPDLYAIGLQEI 217

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP----- 129
              +  A +F        +    +     +     +     V  + + ++   +      
Sbjct: 218 -DLSKEAFLFNDTPREAEWVKYVMDGVHSKAKYKSVAVTRLVGMQLIVLVNSKHYQFVKN 276

Query: 130 ---LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                       + GN+  V + +E++   +  ++ HL +        N      +    
Sbjct: 277 VAVDTVGTGLLGKMGNKGGVAVRLELHNTSLCFVNCHLAAHIEEFERRNQDYKDINARIN 336

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTID 229
             +       Q  +        GD N +I  L                    D   +  D
Sbjct: 337 FRKQ-----PQSIKDHEQVYWLGDLNYRITDLNTQQVKTLLARNEIVTLLKADQLNQQKD 391

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF---SEILYNEDDIK 286
               L+ + +   +     K   N    D     + A      +      E +Y      
Sbjct: 392 RGHVLLDYTEGDITFHPTYKYDLNTDTFD---TSEKARPPAWTDRILWRGEGIYQTAYRS 448

Query: 287 SRGKRLSDHCPISI 300
               R+SDH P+S 
Sbjct: 449 HMDVRISDHKPVSA 462


>gi|311894103|dbj|BAJ26511.1| hypothetical protein KSE_06710 [Kitasatospora setae KM-6054]
          Length = 339

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/281 (10%), Positives = 63/281 (22%), Gaps = 56/281 (19%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA----DIVFLQEMGSYNAVAKVFPK 86
           +  L  +                      Y   +      D+V  Q +       +    
Sbjct: 103 LWWLVPRFVPDGDDAPAGAPRLRVATSNNYMGQVSPKSLVDLVREQRIDVLAVEEQSDSA 162

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                      L+ H +R ++ D     A+  +                          V
Sbjct: 163 AAALDAAGIRELLPHRERPADRDT----AIYTRLPVTAAADPGWPT-------------V 205

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
            L VE+ G+ + ++ +H                      + A+ L +            V
Sbjct: 206 NLTVEVGGRPVQIVAVHTYYPLGDA-------------RRWAEDLHELTAAAPGRTRNAV 252

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFV 261
           + GDFN  +++    D     +                     +   +       ID+ +
Sbjct: 253 LLGDFNATLDHRPMRDLVDTGLSD---THEELGAGLFPTWPENHPDFRGVPPVIQIDHVL 309

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    + E                   SDH  +  + 
Sbjct: 310 HGPALTAVTVSEHALPR--------------SDHRAVVAEL 336


>gi|167535764|ref|XP_001749555.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771947|gb|EDQ85606.1| predicted protein [Monosiga brevicollis MX1]
          Length = 462

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 92/336 (27%), Gaps = 54/336 (16%)

Query: 18  ASVAQKVRLVSWNI-------NTLSEQEGVSLWKNSVK----RTTSDYTLLRQYAKNLDA 66
                 +RLV++N+       + L  +E    +   +     + +  +  ++Q  + L  
Sbjct: 34  EPNPTNIRLVTYNVLADCYVRHHLRNEEKRKHYFGDIPEEHLQWSHRWPCIQQEVRRLKG 93

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           DIV +QE+  +      F      + Y    + N + R+ ++ +  AI +R     V ++
Sbjct: 94  DIVCMQEVE-FAKFDDEFCPFMQSLGYDRCIMQNDTNREPDHPVGVAIFLRSARFEVTKE 152

Query: 127 SYPLLGAKDSFSRAGNRRAVEL--------------LVEINGKKIWVL-----DIHLKSF 167
            +                ++ L               +      + ++     D  +   
Sbjct: 153 HHRSRALILGLQDRVTSTSLALANCHLIAQASREADRLRQAESVMRLVERLNADATVVLG 212

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA------------------- 208
            F D             +   +         +        +                   
Sbjct: 213 DFNDEEHTRCVRYVLQQTLALRAGAPHAQALEAQGQSVFASTSSSGGPEGEAPAEEESDA 272

Query: 209 -GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-- 265
            GD           D+   ++D +  L+    E                +D+ ++  N  
Sbjct: 273 EGDATEATEASAAADEVVASLDGHRLLMYSAYENVDLF-TFVARYLVSRMDHVLLSSNCE 331

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                   +          +    +  SDH P++++
Sbjct: 332 LVARHAPFAPETRDAVLAHLLPSAQHGSDHLPVAVE 367


>gi|147860973|emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/289 (10%), Positives = 75/289 (25%), Gaps = 65/289 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +++R++SWN+   ++               S    ++   ++   D+  LQE       
Sbjct: 687 GEQLRILSWNVRGANDS--------------SKRRXIKAVIRSQRVDLFCLQETKIXXLS 732

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +          S       +     +     + V      +      +     S    
Sbjct: 733 EGLV-----RSLGSGRWXNWVALDAVGSAG--GMLVCWDKRSLEVMETEVGKFSVSCXFR 785

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                +  +                                  L ++   ++        
Sbjct: 786 NVENGLAWIFTGVYGPF-------------------SKGDRECLWEELGAIRGLWE---- 822

Query: 201 SLVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              P+ + GDFN  ++    N           F +T+D  + +    +      +  +N 
Sbjct: 823 --DPWCLGGDFNVILSQRERNRQGRLTGAMRXFAQTVDELELMDLPMQGGAFTWSGGRNN 880

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++   +D F++ Q   +     +   +               DH PI +
Sbjct: 881 QSWARLDRFLVTQXWLEMFSGIAQCRLQRPTX----------DHFPILL 919


>gi|2072961|gb|AAC51269.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ +  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHILGSKALLSKCKRTQIIT------------NYLSDHSAIKLEL 237


>gi|293338471|gb|ADE43488.1| AmpN [Stenotrophomonas maltophilia]
          Length = 220

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 60/245 (24%), Gaps = 61/245 (24%)

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
           +  +      +       ++ +A+  K       +       D   R          +E 
Sbjct: 2   FRPDGHHCFYRDAITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRY---------IEA 52

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
               + V+  ++ S    D  +              +WL+  + +   S   +V+ GD+N
Sbjct: 53  RYGNLSVVSFYIPSGSSGDLRQGFKFEV-------MEWLRPILEEWARSGRDYVLCGDWN 105

Query: 213 RKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKD---------SRCNA 247
              +                     D        +         +               
Sbjct: 106 IVRSALDIKNWKSNQKNSGCLPEERDWLNALCADHGQATDVAAGRGWADAYRLLNPTGED 165

Query: 248 NKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                N+           IDY  +       L   S             R +R SDH P 
Sbjct: 166 YTWWSNRGAARANNVGWRIDYQFITPGLRDRLRSCSI-----------YRDERFSDHAPF 214

Query: 299 SIDYD 303
           ++DYD
Sbjct: 215 TVDYD 219


>gi|281207564|gb|EFA81747.1| hypothetical protein PPL_05741 [Polysphondylium pallidum PN500]
          Length = 710

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 99/328 (30%), Gaps = 74/328 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ + ++NI           ++ S + + S    + +   +L++DI+ LQE        
Sbjct: 402 HRLSITTFNIL-------APCYEKSTEHSYSRQEDIIKTLLSLNSDIINLQEFYFNEEFE 454

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +     +    + +      KR +      AI +++    + ++        D      
Sbjct: 455 SL-----YTTRLAAKYNSIALKRTNQKKDGLAIFIKRSYQIITKKPLRFNDQGD------ 503

Query: 142 NRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R A+ L ++ + G +  +++ HL          +       L   Q Q ++  I     
Sbjct: 504 -RVALFLHIKSDIGAEFIIVNTHLTFP-------HNQFDEEVLRLSQIQSVQASIDSYVR 555

Query: 201 S-----LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                  +P +I GDFN   N L +    ++ +  N  L  F        +   +  +  
Sbjct: 556 QLNVGYELPVLICGDFN-SPNGLIDKCVVYQFLKTNQYLSTFNILHPETKHFVSHKNHLQ 614

Query: 256 P---IDYFVMDQ-----------------------------------NAYKFLIQESFSE 277
               +D+  +                                        K         
Sbjct: 615 QEVGVDFIYLRDHQLYNYLSNSNNNNNNNNNKQTEQEQEQQPTPENSQLLKGSHIYPIDS 674

Query: 278 ILYNEDDIKSRGKR---LSDHCPISIDY 302
             +  +    +  +   LSDH P++  +
Sbjct: 675 YFFPRELSPQKWYQDMKLSDHRPLTTTF 702


>gi|195997029|ref|XP_002108383.1| hypothetical protein TRIADDRAFT_18427 [Trichoplax adhaerens]
 gi|190589159|gb|EDV29181.1| hypothetical protein TRIADDRAFT_18427 [Trichoplax adhaerens]
          Length = 378

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 65/214 (30%), Gaps = 23/214 (10%)

Query: 23  KVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI   +         +L      +       +      L+ADIV LQE+   +
Sbjct: 2   DFTILSYNILADNLLWKHSYLYNLCPPEALQWDFRKEKIINELYQLNADIVCLQEVHDQH 61

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               + P      +        + KR  NN    A   +K    ++Q+            
Sbjct: 62  YHNYIKPMMKRKGYI-----GAYEKRFGNNFDGCATFFKKTKFNMVQRCRVDYHVNGVSL 116

Query: 139 RAGNRRAVELLVEI--------NGKKIW------VLDIHLKSFCFLDSLENTYSPSCSLL 184
              +   + +++E         +G+         + + +LK       L          L
Sbjct: 117 MDRDNIGLIVMLEYRNPTSNRRHGQSNHATEASGLSEPNLKLCIANTHLLYNPKRGDVKL 176

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           +Q  +   +       +  P ++ GDFN      
Sbjct: 177 AQLTKLFAEINNLTTSANCPVILCGDFNSTPTSA 210


>gi|154270790|ref|XP_001536249.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150409823|gb|EDN05263.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1307

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 70/295 (23%), Gaps = 62/295 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A++   + L+ +N++  +   G                LL   A     D++ +QE 
Sbjct: 363 SPHATMRDTLNLLQYNVHNSARVMG---------------ALLADPATEDKYDVIAVQEP 407

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                             +                      V K+ V    + +      
Sbjct: 408 S---------RNPHMLATHCPRSCGFWPAYHPETRPRVCFLVNKRLVEHTWECHY----- 453

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                  +     L +  +  K+ +++++        S     +        Q Q +   
Sbjct: 454 ------HSEYIAVLTITTDLGKVQIVNVYAPPPGGYSSEPEEST------IGQLQEVAGM 501

Query: 195 ITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
                 +    VI GD N             N    W+ I   D L              
Sbjct: 502 -----GTDAELVILGDLNVHHERWGGVRVERNFRMAWQLIAQVDRLGLQLATPVGATTWQ 556

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   ID   +    +  L + +                + SDH PI    +
Sbjct: 557 DRGSPGTTIDLTFLSPLLHDKLRRCAI----------AEEACKGSDHKPIETTLE 601


>gi|146282293|ref|YP_001172446.1| hypothetical protein PST_1930 [Pseudomonas stutzeri A1501]
 gi|145570498|gb|ABP79604.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 365

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/286 (11%), Positives = 68/286 (23%), Gaps = 61/286 (21%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +   ++R++S N+  L                      L    +    D++   E   + 
Sbjct: 97  ATGPRIRVMSSNV--LGPNRQS--------------DRLLALVREYRPDMLVTLESDQW- 139

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                     W                   D    + V  +      +   L+       
Sbjct: 140 ----------WETQLEPLAEEYPHSIRCPLDNLYGMHVFSRLPLEEPELCFLVEDDVPSM 189

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A  R             + V    L       +  +  +     L   A+ ++      
Sbjct: 190 HARVRV---------SDNLAVRMHFLHPAPPSPTENDESTERDVELLVVARSIQH----- 235

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             S  P +++GD N            ++ I     L               +   + P+D
Sbjct: 236 --SDDPVIVSGDLNDVAWSPTTR--LFRKIS--GLLDPRVGRGMYNTFHAHHWFLRWPLD 289

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +F    +              +    +       SDH P+ I+  +
Sbjct: 290 HFFHSAH--------------FRFVRLLRLPDIGSDHFPVFIELQY 321


>gi|310825341|ref|YP_003957699.1| endonuclease/exonuclease/phosphatase family protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309398413|gb|ADO75872.1| Endonuclease/exonuclease/phosphatase family protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 469

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 62/230 (26%), Gaps = 35/230 (15%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +  +    D+V +QE    +         T+  F        +  ++S   I   +  R 
Sbjct: 237 RLMQGAKPDVVMVQEFNYKSGSISDLVNTTFPGF--------YYYQESGAQIPNGVISRW 288

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTY 177
                      L   +       NR      ++I G K +WV+ +HL             
Sbjct: 289 PI---------LASGEWDDPEVDNRDFAWARIDIPGPKDLWVVSVHL------------L 327

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           + + S  + +A  L   I           I GDFN           F + +         
Sbjct: 328 TRNASTRNTEALSLVAKIKANIPVGDYLAIGGDFNTDSRSESCFTTFAQVVTTTGPHPAD 387

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
               +    +          D+ ++D +   +          +    +  
Sbjct: 388 KNGTEGTNASRGKPY-----DHVLVDADLRAYQTATVIGASSFPNGLVLD 432


>gi|227537026|ref|ZP_03967075.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243118|gb|EEI93133.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 674

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 75/301 (24%), Gaps = 54/301 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++ WNI       G            +  + +    ++  ADI+ +QE          
Sbjct: 405 VRVLQWNIWHGGVHLGK----------EAGRSRITDLIRSAKADIITMQE---------- 444

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +    S  + +    +  ++  + A+  R     +                 G R
Sbjct: 445 ----GYSAQDSIAQALGFHLQTKSSKDNLALLSRYPVESIKSSEPFKSNPAKIDLPNGKR 500

Query: 144 RAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V +  +    +  +              +      + + +    +  KD     +   
Sbjct: 501 ILVNDCWLRYAYRPEYTCAYQNTGMDPQTWIAEDAVLALTDIRNLME--KDVNPYIESPD 558

Query: 203 VPFVIAGDFNRKINYLGNND-------------DFWKTIDPNDSLIRFPK-------EKD 242
           +P +IAGDFN   +                      K +        F +        + 
Sbjct: 559 MPVIIAGDFNSCSHLDWTERTRSLHYGYGPVAFPTSKFMYEQGFKDSFREMNPDELTHQG 618

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         ID+           I         + DD+       SDH  +   +
Sbjct: 619 GTFAPIYGQLQNARIDFIYYKGGI--KAISSKIVRTSPDIDDV-----WASDHAAVLTIF 671

Query: 303 D 303
            
Sbjct: 672 T 672


>gi|147768838|emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 78/304 (25%), Gaps = 72/304 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA------------ 66
           S A  +R+  W         G       VKR     + + +  +                
Sbjct: 606 SAAMTLRVGIW---------GGLQTNGLVKRAERRTSSIGRKVQEESYSKSVYQNWPEKV 656

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+  +QE        +V        +   + L               + +      +   
Sbjct: 657 DLFCIQETKMQVMSEEVVRSLGPGRYLDWKALNAMGTAG-------GVLICWDKRSLE-- 707

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                           + ++       G  +  +   +   C     E  +    ++   
Sbjct: 708 ---------LLGVEEGQFSISCRFRNVGDGVIWVFTGVYGPCSRKDRECLWEEFGAIRGL 758

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRF 237
                            P+ + GDFN  +     + +         F + ID    +   
Sbjct: 759 W--------------EDPWCLGGDFNSTLYQAERSRNGRITSAMRRFAQVIDELGLIDIP 804

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            +      +   N ++   +D F++  N              Y+  + +   + +SDH P
Sbjct: 805 LQGGSFTWSGGLNNQSWARLDRFLVSPN----------WIDQYSRANQRRLPRPISDHFP 854

Query: 298 ISID 301
           I ++
Sbjct: 855 ILLE 858


>gi|115373527|ref|ZP_01460824.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369533|gb|EAU68471.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
          Length = 452

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 62/230 (26%), Gaps = 35/230 (15%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           +  +    D+V +QE    +         T+  F        +  ++S   I   +  R 
Sbjct: 220 RLMQGAKPDVVMVQEFNYKSGSISDLVNTTFPGF--------YYYQESGAQIPNGVISRW 271

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTY 177
                      L   +       NR      ++I G K +WV+ +HL             
Sbjct: 272 PI---------LASGEWDDPEVDNRDFAWARIDIPGPKDLWVVSVHL------------L 310

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           + + S  + +A  L   I           I GDFN           F + +         
Sbjct: 311 TRNASTRNTEALSLVAKIKANIPVGDYLAIGGDFNTDSRSESCFTTFAQVVTTTGPHPAD 370

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
               +    +          D+ ++D +   +          +    +  
Sbjct: 371 KNGTEGTNASRGKPY-----DHVLVDADLRAYQTATVIGASSFPNGLVLD 415


>gi|108708285|gb|ABF96080.1| Endonuclease/Exonuclease/phosphatase family protein, expressed
           [Oryza sativa Japonica Group]
          Length = 523

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/275 (9%), Positives = 71/275 (25%), Gaps = 43/275 (15%)

Query: 44  KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERL 98
           ++      +    + +  +   AD+V LQ + +        ++++         ++    
Sbjct: 237 RHRSSSGAARRRSVAEALREAGADMVALQNVRAEEGRGMRPLSELAEGLGMRYVFAESWA 296

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKI 157
             +             AV  +       +  L    D       R  +   +E+ G  ++
Sbjct: 297 PEY-----------GNAVLSRWPIKRWNARRLADHFDF------RNVMRATIEVPGAGEV 339

Query: 158 WVLDIHLKSFCFLDSLENTYS--PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
            +   HL        ++   S                + +     S   +     ++ +I
Sbjct: 340 NLYCTHLDHLDEGLRMKQVDSILRFADGHHHILAGGLNALDASDYSADRWAAIAKYHEEI 399

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------ANKNLRNKIPIDYFVMDQNA 266
                  +  + +     +                          +    +DY +   N+
Sbjct: 400 GKPPPKSEVMRHLKAKRYVDAKDFAGGRDAGLVVVPNGQDVQGTCKYGTRVDYILASPNS 459

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +  S++ +              SDH  + +D
Sbjct: 460 PYNFVPGSYAVVPSMGT---------SDHHIVMVD 485


>gi|326334195|ref|ZP_08200418.1| putative LigA [Nocardioidaceae bacterium Broad-1]
 gi|325947986|gb|EGD40103.1| putative LigA [Nocardioidaceae bacterium Broad-1]
          Length = 465

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 72/273 (26%), Gaps = 34/273 (12%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           +     +  +          T  +    +     D D +   E+    +         + 
Sbjct: 49  VAYTPPRYRMVQANIKASMGTGRFKRDVREVVGTDPDFITYNEVNGRRSAD--LEPGRYR 106

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150
           ++         +   + ++   A A +  +    ++      A D     G R A  + +
Sbjct: 107 VWRKGGDPYRSATAVAWDNDKWAAASKGIHQISNKR----GKAADQRLHWGIRYANWVTL 162

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
           E       V  + +          +   PS   L+   + L            P V+ GD
Sbjct: 163 ENRATGRNVSVVAVHFAPKSKHYGDLVRPSARALNVLVKALARR--------GPVVVGGD 214

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
            N + +      D +       +     +            R    IDY +         
Sbjct: 215 LNVQYDGSRYPRDIFAEQHLVPTYDVTQQAPA-------TYRRSSTIDYVLARG------ 261

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    +   + ++ G   SDH  + +D+ 
Sbjct: 262 ------IARFATGNQRAFGLE-SDHNALRVDFS 287


>gi|194207675|ref|XP_001916640.1| PREDICTED: similar to inositol polyphosphate 5-phosphatase [Equus
           caballus]
          Length = 1007

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 79/314 (25%), Gaps = 61/314 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           + ++N+N  S +E +  W             LR   +  D   V  QE+           
Sbjct: 363 VGTYNVNGQSPKECLRPW-------------LRHSVEAPDVYCVGFQELDLSKEAFFFQD 409

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFS 138
              +  W    S                   I     V++++   + +            
Sbjct: 410 TPKEEEWFKAVSDCLHPGAKYAKIKLIRLVGIMLLLYVKEEHAAYVSEVEAETVGTGIMG 469

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R GN+  V +    +   I V++ HL +        N          Q  Q         
Sbjct: 470 RMGNKGGVAIRFRFHNTSICVVNSHLAAHTEECERRNQDYKDICSRMQFCQVDPGLPPLT 529

Query: 199 KESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEK 241
                  +  GD N +I  L                    D     +        F + +
Sbjct: 530 ISKHDVILWLGDLNYRIEELDVEKVKKLIEEKAFQTLYAYDQLKTQVAAKAVFEGFTEGE 589

Query: 242 DSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +     K              R     D  +           ++ +++ Y         
Sbjct: 590 LTFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MA 637

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+S  +D
Sbjct: 638 LKTSDHKPVSSVFD 651


>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
 gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
          Length = 1179

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/340 (10%), Positives = 88/340 (25%), Gaps = 84/340 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSY 77
           + A  +++ S+N+          +          D  L+        A D++ LQE+   
Sbjct: 267 TDASNLKISSYNV---------LIDSEYPPTHERDPFLISTILSESAAADVLVLQEVSDD 317

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                +   +    +        +      +          +NV +L +       K   
Sbjct: 318 FLSYILSNPDIQERY-------QYVSHGPPSQSDIGPLPNLRNVVILSR--WCFSWKFVS 368

Query: 138 SRAGNRRAVELLV-------EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            +   + A+             + + + V  +HL +     S+             Q Q 
Sbjct: 369 FQQKYKGALVAKFGGLISNETCSQQGLVVAGVHLTAGLTDSSVAAKNQ--------QLQA 420

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------------------------- 225
           L+D++  + ++    + AGDFN   +    +                             
Sbjct: 421 LRDYLVDQHDADAWVI-AGDFNIPTSTYTIDTALKDGSISKETVATLSSIETEFSDAGLI 479

Query: 226 -----------KTIDPNDSLIRFPKEKDSRCNAN----------KNLRNKIPIDYFVMDQ 264
                        +  +     F  E+ +  +             ++      D  +   
Sbjct: 480 DTWAVARVEATDEVVSSTYDELFDGEEGATFDPRNNILAAATSETSIGRPQRYDRILARF 539

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                + + +   +    D  +      SDH  I    +F
Sbjct: 540 QDNFRVSRCNHFGLPSEVDGSQ---VVPSDHAGIRSTLEF 576


>gi|85375016|ref|YP_459078.1| hypothetical protein ELI_10945 [Erythrobacter litoralis HTCC2594]
 gi|84788099|gb|ABC64281.1| hypothetical protein ELI_10945 [Erythrobacter litoralis HTCC2594]
          Length = 333

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/252 (11%), Positives = 63/252 (25%), Gaps = 49/252 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y       +  D D++ L E  +   + ++ P          E L N           
Sbjct: 122 DQYDRTLDLIRERDPDMLLLTET-NQVWLDRLMPVLERYPQRMAEPLDNTYG-------- 172

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFL 170
                      +     P+  A+    R  +   +   V I       ++ +H +     
Sbjct: 173 ----------MIFATRLPVQRAQMPMDRIADLPTLYATVTIPNAGDFELIGLHPRPPKPG 222

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
           + +E                + +   +  + L   +  GDFN             +  + 
Sbjct: 223 EDVETRNQN-----------IIEAGAKTPDGLEEALAIGDFNDVPWSKTTE----QFREM 267

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            +               +   +   P+D+  +    +                +      
Sbjct: 268 GNYGDPRAGRGTYPTFPSWAGKFGWPLDHIFVKGGLHVR--------------NFAVLDD 313

Query: 291 RLSDHCPISIDY 302
             SDH P++ D 
Sbjct: 314 VGSDHRPLAADI 325


>gi|323352922|gb|EGA85222.1| Ngl3p [Saccharomyces cerevisiae VL3]
          Length = 506

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 65/221 (29%), Gaps = 9/221 (4%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +  V+++++N    TL  ++          +      +L    K    D+V LQE+
Sbjct: 102 VTQDSLDVKIMTYNTLAQTLIRRD-FFPESGPALKWHKRSKVLVHELKKYRPDVVSLQEV 160

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                N   + F K  + + +       H    + N+    +            +  ++ 
Sbjct: 161 DYNELNFWQENFHKLGFDMIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVIS 220

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A+          ++      +     ++  +   F     +      S  +     Q ++
Sbjct: 221 ARTRTKNIALIISLYFKGITDSSSRGIIVANTHLFWHPFGVFERLRQSYLV----LQKIQ 276

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +     K +    ++ GDFN +           + +     
Sbjct: 277 EIKACSKYNGWHSLLMGDFNTEPEEPPYLAITKRPLILKGP 317


>gi|308370528|ref|ZP_07421881.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu003]
 gi|308374126|ref|ZP_07434963.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu006]
 gi|308376539|ref|ZP_07439217.2| hypothetical exported protein [Mycobacterium tuberculosis SUMu008]
 gi|308331658|gb|EFP20509.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu003]
 gi|308342920|gb|EFP31771.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu006]
 gi|308350662|gb|EFP39513.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu008]
          Length = 440

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 88/297 (29%), Gaps = 31/297 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           VF     T +++    ++++NI  L      ++           +   ++  K L+A  V
Sbjct: 161 VFVGNTPTDTISGDFSMLTYNIAGLPFPLSSAILP--------RFFYTKEIGKRLNAYYV 212

Query: 70  F-LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             +QE   +     +  K+        E                      K  R+ +Q++
Sbjct: 213 ANVQE--DFAYHQFLIKKSKMPSQTPPEPPTLLWPIGVPFSDGLNTLSEFKVQRLDRQTW 270

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               + +  +  G       +    G  + V ++H  +     +  N             
Sbjct: 271 YECTSDNCLTLKG--FTYSQMRLPGGDTVDVYNLHTNTGGGPTTNAN------------L 316

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             + ++I Q   +    ++ GDFN + +   +    +  ++         +   +     
Sbjct: 317 AQVANYIQQN-SAGRAVIVTGDFNARYSDDQSALLQFAQVNGLTDAWVQVEHGPTTPPFA 375

Query: 249 KNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      +D           L   S+           S+G+ LSDH P  + +
Sbjct: 376 PTCMVGNECELLDKIFYRSGQGVTLQAVSYGNEAPK--FFNSKGEPLSDHSPAVVGF 430


>gi|307111224|gb|EFN59459.1| hypothetical protein CHLNCDRAFT_138036 [Chlorella variabilis]
          Length = 252

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 81/283 (28%), Gaps = 46/283 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++ + N+        +S W  +     S Y  + +  K+    ++ LQE+ S  A  K 
Sbjct: 2   FKVFTLNV----SAGNLSAWAPAGFSLLSKYEAIVELIKHHSPQLISLQELDSQAA--KY 55

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F         +  + +  ++   ++    A A  +   +                  G  
Sbjct: 56  FIAALGSAADAGWQHLTQAESHCHSTHIWAAASLQAKPKRSV---------------GPV 100

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              ++ +  +    +    HL+ +            +C  L Q A  L+           
Sbjct: 101 AIAQIQLTGDDGCFYFAGCHLEPYA---------QGACLRLQQIAATLRSL-----PPRC 146

Query: 204 PFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             V+AGD N +     + +       +K      S         ++ +           D
Sbjct: 147 RLVLAGDCNMRNAENSSVEALGLGDAFKQAGSPPSHSFTWNSTINKYHGADQRAYTGRYD 206

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +       L      +++ N+         LSDH  +   
Sbjct: 207 RIYLSGFVATEL------QMVANQPMTPGHADYLSDHFGLVAT 243


>gi|118381665|ref|XP_001023993.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89305760|gb|EAS03748.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 422

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 70/244 (28%), Gaps = 32/244 (13%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           ++V+++++N   L  +           +      +++   +    DI+  QE+       
Sbjct: 39  EEVKILTYN---LFMRPPFVKNNEDDYKNERCKLIIKNEIQKF--DIICFQELF------ 87

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------AIAVRKKNVRVLQQSYPLLGAK 134
           ++F      + YS  +        S              + +  K   V     P     
Sbjct: 88  RLFSNRRHKMVYSAIKKGFLYHVSSPQPSFFKSYFVDAGLTILSKYPIVESCFRPFRYG- 146

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   +  +   + +N + I VL+ H ++        N       +       LK +
Sbjct: 147 ILADGLCQKGVLYAKIRVNERHIHVLNTHTQASYN----TNEKEIFVEMRKILEDCLKQY 202

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                +     + AGDFN   N+  +   F         ++     +            K
Sbjct: 203 ---GFDRGDICIFAGDFNVDSNHPIHPIRFLNKQQDLKEILGINDTQQ------HFDEYK 253

Query: 255 IPID 258
             ID
Sbjct: 254 GLID 257


>gi|15902554|ref|NP_358104.1| hypothetical protein spr0510 [Streptococcus pneumoniae R6]
 gi|116515991|ref|YP_816010.1| hypothetical protein SPD_0507 [Streptococcus pneumoniae D39]
 gi|148992308|ref|ZP_01822031.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Streptococcus pneumoniae SP9-BS68]
 gi|15458083|gb|AAK99314.1| Hypothetical protein spr0510 [Streptococcus pneumoniae R6]
 gi|116076567|gb|ABJ54287.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
 gi|147928934|gb|EDK79946.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Streptococcus pneumoniae SP9-BS68]
          Length = 333

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNVLPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|240273218|gb|EER36740.1| SacI domain and endonuclease/exonuclease/phosphatase [Ajellomyces
           capsulatus H143]
          Length = 1241

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 87/314 (27%), Gaps = 39/314 (12%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL--QEM 74
           + ++ VR  + ++N+N  +     +     +     +             +IV L  Q++
Sbjct: 606 TSSKTVRIWVGTFNLNGRTNGANGTNLSPWLLSQLDNLQETPSIFAIGFQEIVELSPQQI 665

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKKNVRVLQQSYPLLG 132
            S +   ++  +N      +               +      A+       L     ++ 
Sbjct: 666 MSTDPGNRMIWENAVKHTLNDYANRKGESEYVLLRSGQLVGTALLIFVKSELLSEIKVVE 725

Query: 133 A----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQ 187
                      AGN+    +  + +  +I  +  HL +     D     Y      L  Q
Sbjct: 726 GSVKKTGMSGMAGNKGGCAIRFQYSNTRICFVTAHLAAGFSNYDERNRDYQTINQGLRFQ 785

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPN 231
                    +  E     +  GDFN +I                    ++D     +   
Sbjct: 786 R-------NRSIEDHDTIIWLGDFNYRIGLPDDTVRGLIKAGDFESLYSHDQLNLQMVAG 838

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRG 289
            +   + + + +     K        D     + A    +  +  +        +  +  
Sbjct: 839 LTFPFYSEARITFPPTYKYDNGTDQYD---TSEKARTPAWCDRILWKGANIRLLEYNAAP 895

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+   +D
Sbjct: 896 LKFSDHRPVYATFD 909


>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
 gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
          Length = 1204

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/342 (9%), Positives = 79/342 (23%), Gaps = 74/342 (21%)

Query: 11  FFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
               P T   A+          + ++N+          L + +  +    Y  L +   +
Sbjct: 246 LSWCPVTEPSAESANVRSNGFSVSTYNV----------LAEFTRPQPQDRYDALVKNILS 295

Query: 64  LDA--DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
            +A  D++ LQE+     +  +  ++    +          +          +   +  V
Sbjct: 296 TNALADVLVLQEVCDDFLLFLLSQQDVQRRYPFVTHGPPGQEGSPP------LPSLRNIV 349

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
              Q  +            G        +      +  +   +     L+        + 
Sbjct: 350 VFSQWKFSWAWLPFEARHKGAAIVKVDGIGDLNSCLPTIITAVHLTSGLND------AAV 403

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------------- 226
                Q + +   +        P VIAGDFN   +    +    +               
Sbjct: 404 DSKMSQIRNIIHLLDNDYPDN-PSVIAGDFNFATSQEVIDAAVKQNMISSAGAEKILGLN 462

Query: 227 --------------------------TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                                      +   +    +    +               D  
Sbjct: 463 YLLSKAHFMDGWVVACEEPGDTDIDGGLGEGEYGATYDPILNPLAAQYSVNGRPQRYDRI 522

Query: 261 VMDQNAYKFLIQESFSEILYN-EDDIKSRGKRLSDHCPISID 301
            + Q     +   +F  + +    +     +  SDH  I  +
Sbjct: 523 FVRQTGKSKVTDFNFFGLRHILGGERLPMSEYASDHWGIRAE 564


>gi|60683195|ref|YP_213339.1| hypothetical protein BF3749 [Bacteroides fragilis NCTC 9343]
 gi|60494629|emb|CAH09430.1| putative exported protein [Bacteroides fragilis NCTC 9343]
 gi|301164714|emb|CBW24273.1| putative exported protein [Bacteroides fragilis 638R]
          Length = 678

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 75/308 (24%), Gaps = 54/308 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  V+++ WNI       G                 +    ++  AD++ +QE  
Sbjct: 403 NNQTQSNIVKVLQWNIWHGGIHLGNEGQ-----------QRVLDLIRSSRADVIMMQEAY 451

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  +     + +   + +           +   AIA R+       +     G + 
Sbjct: 452 GIQ--QMLADSLGYHLKTHSLKDNLAMYSRFPLE---AIAWREPFKSNPAKITLPNGKRI 506

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            F     R A          +             LD        S   L          I
Sbjct: 507 MFVDCWLRYAYRPEYTSGYAE-----------KGLDPSVWVAEDSILALPDIRNIYTKDI 555

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKD 242
               E+ +P ++ GDFN   +                      + +  N     F ++  
Sbjct: 556 APNLETDMPVIVTGDFNSCSHLDWTERAKPLHHGYGPVAFPASRYMLENGFKDSFREKNP 615

Query: 243 ------SRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     A    +     ID+          ++           D +       SDH
Sbjct: 616 DEVAYQGGTVAAIYGQMQMSRIDFIYYKGGL--KVLSSKIVRTAPEIDYV-----WASDH 668

Query: 296 CPISIDYD 303
             +   ++
Sbjct: 669 AAVLTVFE 676


>gi|325089246|gb|EGC42556.1| SacI domain-containing protein [Ajellomyces capsulatus H88]
          Length = 1241

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 87/314 (27%), Gaps = 39/314 (12%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL--QEM 74
           + ++ VR  + ++N+N  +     +     +     +             +IV L  Q++
Sbjct: 606 TSSKTVRIWVGTFNLNGRTNGANGTNLSPWLLSQLDNLQETPSIFAIGFQEIVELSPQQI 665

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKKNVRVLQQSYPLLG 132
            S +   ++  +N      +               +      A+       L     ++ 
Sbjct: 666 MSTDPGNRMIWENAVKHTLNDYANRKGESEYVLLRSGQLVGTALLIFVKSELLSEIKVVE 725

Query: 133 A----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQ 187
                      AGN+    +  + +  +I  +  HL +     D     Y      L  Q
Sbjct: 726 GSVKKTGMSGMAGNKGGCAIRFQYSNTRICFVTAHLAAGFSNYDERNRDYQTINQGLRFQ 785

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPN 231
                    +  E     +  GDFN +I                    ++D     +   
Sbjct: 786 R-------NRSIEDHDTIIWLGDFNYRIGLPDDTVRGLIKAGDFESLYSHDQLNLQMVAG 838

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRG 289
            +   + + + +     K        D     + A    +  +  +        +  +  
Sbjct: 839 LTFPFYSEARITFPPTYKYDNGTDQYD---TSEKARTPAWCDRILWKGANIRLLEYNAAP 895

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+   +D
Sbjct: 896 LKFSDHRPVYATFD 909


>gi|281340342|gb|EFB15926.1| hypothetical protein PANDA_005445 [Ailuropoda melanoleuca]
          Length = 525

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +
Sbjct: 147 DFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDH 206

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A++ P      ++       +  R        AI  +     +L  +      +D   
Sbjct: 207 YGAEIRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFYRRDVPL 261

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   + LL++       +        C  ++          +   Q   L   I+  
Sbjct: 262 LDRDNVGLVLLLQPK-----IPSAASPVICVANTHLLYNPRRGDIKLTQLAMLLAEISSV 316

Query: 199 KESLV----PFVIAGDFNRKINYLGN 220
                    P V+ GDFN        
Sbjct: 317 AHQKDGSFCPIVMCGDFNSVPGSPLY 342


>gi|253567149|ref|ZP_04844599.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251943980|gb|EES84499.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 678

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 75/308 (24%), Gaps = 54/308 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  V+++ WNI       G                 +    ++  AD++ +QE  
Sbjct: 403 NNQTQSNIVKVLQWNIWHGGIHLGNEGQ-----------QRVLDLIRSSRADVIMMQEAY 451

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  +     + +   + +           +   AIA R+       +     G + 
Sbjct: 452 GIQ--QMLADSLGYHLKTHSLKDNLAMYSRFPLE---AIAWREPFKSNPAKITLPNGKRI 506

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            F     R A          +             LD        S   L          I
Sbjct: 507 MFVDCWLRYAYRPEYTSGYAE-----------KGLDPSVWVAEDSILALPDIRNIYTKDI 555

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKD 242
               E+ +P ++ GDFN   +                      + +  N     F ++  
Sbjct: 556 APNLETDMPVIVTGDFNSCSHLDWTERAKPLHHGYGPVAFPASRYMLENGFKDSFREKNP 615

Query: 243 ------SRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     A    +     ID+          ++           D +       SDH
Sbjct: 616 DEVVYQGGTVAAIYGQMQMSRIDFIYYKGGL--KVLSSKIVRTAPEIDYV-----WASDH 668

Query: 296 CPISIDYD 303
             +   ++
Sbjct: 669 AAVLTVFE 676


>gi|220915367|ref|YP_002490671.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219953221|gb|ACL63605.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 389

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 70/284 (24%), Gaps = 43/284 (15%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                 +          +V LQE       +    +    T     + + + +     + 
Sbjct: 105 HVRAEAIADELAATRPGLVGLQEAYLWRVQDPGDFLAGGTTPATTVAYDYVQDLLDALAA 164

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL-----LVEINGKKIWVLDI 162
            D+H  +A       V    +    A     R  +R  +            G     L  
Sbjct: 165 RDLHYVVA-----AEVTLFDFEAPVATGQDVRMTDRGVILARSDLATALPTGGVYATLLP 219

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES----------------LVPFV 206
                  +       S       +  +++   +                        P V
Sbjct: 220 VTVLGNPVQVKRGWVSVDARYRGEWLRFVSTHLEAYHAGVRTAQAAELAGALAAETRPVV 279

Query: 207 IAGDFNRKINYLGN-------NDDFWKTIDPNDS--LIRFPKEKDSRCNANKNLRNKIPI 257
           + GD N +    G          D W  ++ +       FP++                I
Sbjct: 280 LVGDLNSQPGTEGEAVLAAAGFSDVWAAVNGDAPGLTCCFPEDLRIGPGDPGFADLSTRI 339

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           DY ++      +       E++    D +  G   SDH  ++ +
Sbjct: 340 DYVLVRGPVEPWSA-----EVVGETADERVGGLWPSDHAGVAAE 378


>gi|256391765|ref|YP_003113329.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256357991|gb|ACU71488.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 571

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 88/304 (28%), Gaps = 55/304 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQ 72
             + + A + R  ++NI         +   +S    T    ++         +AD +FLQ
Sbjct: 41  SASPNTAPQYRFSTYNI-------CGNHCSSSDYSNTQRLRVVEDEGSPTGGNADDIFLQ 93

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+   +    +  +     +             + +     IA+  K   V  +   L  
Sbjct: 94  EV-CKSQFDSIDAQLRTRGYTGLFDQTKAVGSGTCSGSPYGIAMFTKGAVVQTKVLHLKI 152

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             +          VE            +   L   C +    ++ + S      +AQ L 
Sbjct: 153 GGEPTDEDIASPCVE----------SFIQGRLHWGCSVHLYWDSSTYSA----LEAQKLA 198

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS--------- 243
             +   +E+ +P V+ GDFN        +  +   +  +        ++           
Sbjct: 199 SLVRPWQEAGIPVVLGGDFNASATTSTLDSFYQPGMAGSPHGSFREADQTDKNYFNTSIC 258

Query: 244 -----------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                          +   +    IDY    QNA+  +             D+ +R   +
Sbjct: 259 TATQSDCRSGEPTYVDLTSQATKKIDYLFFSQNAFTNVSG-----------DVLARDVTV 307

Query: 293 SDHC 296
           SDH 
Sbjct: 308 SDHR 311


>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 1040

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 80/331 (24%), Gaps = 73/331 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYNA 79
             + + S+N+          L +         Y  L        A  DI+ LQE+     
Sbjct: 275 DTLTVSSYNV----------LLEQPYPPPRGRYPALVHTILAQSALADILVLQEVCDDFL 324

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +        +        H    +   +   + +  +  R   +  P      +   
Sbjct: 325 SHLLSQNEIQSRYCFATHGPPHQAECAPLPMQRNVVILSRF-RFSWEILPFTERYKTAVI 383

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                  +   +     + V  +HL S               S    Q + L D++    
Sbjct: 384 LKMVGVGKQTADSRFLPLIVAAVHLTSGLAD--------RRVSAKESQIRALYDFLDHTY 435

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL------------------------- 234
               P +IAGD N   + L       + +                               
Sbjct: 436 PEN-PCIIAGDMNIPTSALTVQSAMDEKLLSPAKAYDLSQLESLLCGSRFEDAWLMARAN 494

Query: 235 --------------IRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFLI 271
                              E+ +  +  +N                D  +MD++   FL 
Sbjct: 495 AKDLSPNPADMLSIDTLEGEEGATFDPRRNPLAAASAGPDGRPQRYDRILMDRS--GFLG 552

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              F+     +DD        SDH  +   +
Sbjct: 553 PTEFNLFGLPDDDQNPAELG-SDHWGVRATF 582


>gi|90101342|gb|AAB08434.2| salivary inositol polyphosphate 5-phosphatase [Rhodnius prolixus]
          Length = 321

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 92/330 (27%), Gaps = 47/330 (14%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56
           M    +      ++ C    A+     + + +WN+N        +   N + + +  Y  
Sbjct: 1   MKVLILPVFTIIILACVGLAAKERDFTIHVATWNVNG----RKPTTITNLIGQNSDKYEN 56

Query: 57  LRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN--DIHT 112
           L          IV LQE+   +  AV+       W          N+ K  S     I  
Sbjct: 57  LPDMV------IVGLQEVTMSAVKAVSNALTGELWSETMEKTLKGNYQKVKSVALLGIVL 110

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + V+  +   L+ +             GN+  V +  +++     +++ H  +      
Sbjct: 111 NVFVKLNSAWALKNAAVDEVTTGMAGLYGNKGGVIMKFQLHDLMFCIVNAHFHAHDKGQE 170

Query: 173 LENTYSPSCSL-----------LSQQAQWLKDWI----TQKKESLVPFVIAGDF-----N 212
                    +                   L   I        ES+  F+   D+     N
Sbjct: 171 SRIKDYKEINEGREKLCTPKSDFIFWLGDLNFRIVEKDKYTPESIEKFIKKKDYDELLAN 230

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
            ++    +    +K             + +         R     D  +           
Sbjct: 231 EQLKEAKDAGKIFKDYQEGKIKFAPTFKLNVDEGTYNLKRRPSWTDRVLYKSE-----TN 285

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++   + Y+  +  +R    SDH P+   Y
Sbjct: 286 KNIDVLAYHSLENHTR----SDHFPVMAQY 311


>gi|171677163|ref|XP_001903533.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936649|emb|CAP61308.1| unnamed protein product [Podospora anserina S mat+]
          Length = 450

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 82/296 (27%), Gaps = 35/296 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + +   N+  L      +          +              D+V LQE  +Y+A  
Sbjct: 29  DALTI---NVAGLPAILNDNGVPGDKAANAAAMGA---KFSEYGIDVVQLQEDFNYHA-- 80

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                + +       R          + ++T +        R+           D  +  
Sbjct: 81  -----HIYRTNTHPHRTATSGGVPFGSGLNTVSYLPWVDFRRIKWNKCSDASQSDCLTPK 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G       +   +    +V   +L +   ++          +  +   + + D+I     
Sbjct: 136 GFTFMRVAISSDSSTAAYVDFYNLHADAGVEPG------DLTARNDNVKQVVDYIATW-S 188

Query: 201 SLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDS----------LIRFPKEKDSRCNAN 248
                V+AGDFN +    G+    D   + +P+                  +  S C   
Sbjct: 189 KGNAVVVAGDFNSRYTRTGDTGIRDLLASENPSGPRLKDAWVELLYNNVIPQSPSSCGNP 248

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   +D      +    L              +++ G  L+DH P+ ++Y +
Sbjct: 249 AANDLCEIVDKVFYRASPLLNLQATDVRYDTLR--FLQADGNILTDHNPVLVNYTW 302


>gi|311894512|dbj|BAJ26920.1| hypothetical protein KSE_10860 [Kitasatospora setae KM-6054]
          Length = 329

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/296 (10%), Positives = 61/296 (20%), Gaps = 44/296 (14%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +   ++ + +WN+   +                     LR   K+  A  + L+E    
Sbjct: 49  PTAGPRLTVATWNMCGEAAWGCGKYGGG-----EQKVGALRSLVKDHGARALLLEEACRG 103

Query: 78  NA-VAKVFPKNTWCIFYSTERLINHSKRDS-----NNDIHTAIAVRKKNVRVLQQSYPLL 131
           +   A+      W + +     ++ +   +     +      I +               
Sbjct: 104 DLERARAELGADWQLAFQPYEQVDGAGGATPVDCGDGRGDAGIGILAAAPLADVSPVVAP 163

Query: 132 GAKDSFSRAGNRRAVEL-----------LVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
            ++    R     A                   G  + +   HL               +
Sbjct: 164 QSERGLHRGILCAATRTATGTSAASGASPAAAPGAGLRLCVAHLSLPPTD-----RSDRA 218

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPK 239
                 Q   L    T         V  GD N         D   W     +       +
Sbjct: 219 AEFRDDQLAALLAAGTAAVPGTAGSVFGGDLNSSPPGSDRRDAWIWPAAYFDTVRECAQQ 278

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             + R        N   +DY                                 SDH
Sbjct: 279 APEQRSGFAATHENGHKLDYLF----------------TALPRHGCDRVDTGFSDH 318


>gi|184155957|ref|YP_001844297.1| hypothetical protein LAF_1481 [Lactobacillus fermentum IFO 3956]
 gi|183227301|dbj|BAG27817.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
          Length = 367

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 96/337 (28%), Gaps = 70/337 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ-------EGVSLWKNSVKRTTS-----------DYTL 56
             T +  +     ++N+   +         +   L   +  R              D   
Sbjct: 49  AATLTTGKVYTATTYNVGFGAYNHQFSFFMDAGELKSGTKTRGKYGTARSKAVVLTDTKG 108

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTERLI 99
           + +  +   AD +  QE+ + +  +K                 VF  N    F       
Sbjct: 109 VEKVMQAQQADFMLFQEIDTNSTRSKHVNQVRMVENKFHGYGHVFANNFHSAFLMWPLTD 168

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIW 158
            H    S          R       ++ YP+  +  S     +R      + + NGK++ 
Sbjct: 169 PHGSVQSGLLT----LSRYHIGSATRRQYPVTNSFISKFTDLDRCFAVTTIPVTNGKQLL 224

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--- 215
           +++          S  + Y     +   Q + L   I +        ++ GD+N  +   
Sbjct: 225 LIN----------SHMSAYDKGGKMRKAQMKLLNAVIERAYLDGNYVIVGGDYNHALGKD 274

Query: 216 ---------NYLGNNDDFWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYFVMDQN 265
                              +++      +   + +++     + +L  +  ++Y  +   
Sbjct: 275 MLTHFASQEKVPDWVSVLDQSMVAKGFTMVKAQNRETVPTVRSTDLAYRSGVNYLTVCDG 334

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               L+  + +    N +          DH P+ + +
Sbjct: 335 F---LVSNNVTATATNINTNFDYA----DHNPVKLTF 364


>gi|322785834|gb|EFZ12453.1| hypothetical protein SINV_07041 [Solenopsis invicta]
          Length = 531

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 11/197 (5%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++L+S+NI    L E        ++ K  +  +   L+ +      A+++ LQEM   + 
Sbjct: 142 LKLLSFNILAQNLLEDHSYLYMGHNKKALKWKTRKLLVIEEIFEAKANVICLQEMQEEHL 201

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +  V P      F        + KR ++      +  R     +L  +   L        
Sbjct: 202 LDFVTP------FKQRGYEYLYKKRTNDKKDGLLLLYRSNEFVLLDYAKVELYQSGVELL 255

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +   +   + + G     + +      +     +       LL  + + +        
Sbjct: 256 NRDNVGIIAKLALRGNPETQVVVATTHLLYNPRRNDVRLAQIQLLLAEIERIAFIENTTT 315

Query: 200 ESLV-PFVIAGDFNRKI 215
                P ++AGDFN + 
Sbjct: 316 GPKYLPIILAGDFNLEP 332


>gi|306845228|ref|ZP_07477804.1| AP endonuclease domain-containing protein [Brucella sp. BO1]
 gi|306274387|gb|EFM56194.1| AP endonuclease domain-containing protein [Brucella sp. BO1]
          Length = 322

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/249 (11%), Positives = 63/249 (25%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+ S               F        +S    +      +
Sbjct: 114 EQALSLIAHIRPDVVTLEEVSSMWREK----------FGHIASAYPYSIFCPHPGAVFGV 163

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 164 AILSRRPFIADSAPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 209

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 210 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 252

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 253 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 303

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 304 HLPVLVEFS 312


>gi|326774590|ref|ZP_08233855.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326654923|gb|EGE39769.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 314

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 74/292 (25%), Gaps = 51/292 (17%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           L+   +     + +VS N+   +     +    +                    D++ L+
Sbjct: 74  LLADKSRQGGDLTVVSHNVGADNPDAAGTARALAAAGA----------------DVLALE 117

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+           + T+    +T    +                  + V V   + PL  
Sbjct: 118 ELDP-------ADRRTYERELATAYPHHTVLGTVGVWSRLP-LSDTRPVDVAMDAGPLGD 169

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
            K +  +    R +   V  +   + V   HL S             S       A+ L 
Sbjct: 170 TKPAEVKLAYNRGLRTTVATDHGPLAVYVAHLGSVRVNP----RAGLSSGQRDAGARSLG 225

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             +    E     V+ GD N  ++         +     +                    
Sbjct: 226 RAVA--AERNERVVLLGDLNGTLDDRAYAGITSRMRSAQEVAGDGFGFSWPATFP----- 278

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             + ID  ++       +  ES   +              SDH P++    +
Sbjct: 279 -VVRIDQILVRG-----VEPESSWLLPAT----------GSDHLPVAARVSW 314


>gi|265767745|ref|ZP_06095277.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263252417|gb|EEZ23945.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 678

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 74/308 (24%), Gaps = 54/308 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  V+++ WNI       G                 +    ++  AD++ +QE  
Sbjct: 403 NNQTQSNIVKVLQWNIWHGGIHLGNEGQ-----------QRVLDLIRSSRADVIMMQEAY 451

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  +     + +   + +           +   AIA R+       +     G + 
Sbjct: 452 GIQ--QMLADSLGYHLKTHSLKDNLAMYSRFPLE---AIAWREPFKSNPAKITLPNGKRI 506

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            F     R A          +             LD        S   L          I
Sbjct: 507 MFVDCWLRYAYRPEYTSGYAE-----------KGLDPSVWVAEDSILALPDIRNIYTKDI 555

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD-------------FWKTIDPNDSLIRFPK--- 239
               E+ +P ++ GDFN   +                      + +  N     F +   
Sbjct: 556 APNLETDMPVIVTGDFNSCSHLDWTERAKPLHHGYGPVAFPASRYMLENGFKDSFREKNP 615

Query: 240 ----EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                +     A         ID+          ++           D +       SDH
Sbjct: 616 DEVAYQGGTVAAIYGQMQMSRIDFIYYKGGL--KVLSSKIVRTAPEIDYV-----WASDH 668

Query: 296 CPISIDYD 303
             +   ++
Sbjct: 669 AAVLTVFE 676


>gi|224048022|ref|XP_002196213.1| PREDICTED: synaptojanin 2 [Taeniopygia guttata]
          Length = 1585

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/343 (13%), Positives = 90/343 (26%), Gaps = 67/343 (19%)

Query: 19  SVAQKVRLVS--WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           + +++VR+ +  WN+N   +     L  + +     D   L   ++  D      DI  V
Sbjct: 605 TSSKRVRVATGTWNVNGGKQFRSNILGTSELTDWLLDSPKLSGVSEFQDDDNCPPDIFAV 664

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNV 121
             +EM   +A   V    T    +  +     S+      + +A        I VR  +V
Sbjct: 665 GFEEMVELSAGNIVNASTTNRKMWGEQLQKAISRTHRYIQLTSAQLVGVCLFIFVRPYHV 724

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++             +AGN+ AV +  +        +  HL +       +       
Sbjct: 725 PFIRDVAIDTVKTGMGGKAGNKGAVSIRFQFYSTSFCFICSHLTAG------QTQVKERN 778

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               +  Q L   + Q   S       GDFN +I+                     D   
Sbjct: 779 EDYKEITQKLSFPMGQNMFSHDYVFWCGDFNYRIDLTYEEVFYFLKRQDWKTLLEFDQLQ 838

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQ 272
           +          F +   +     K              R     D      +        
Sbjct: 839 QQKSSGKIFKDFHEGTINFGPTYKYDVGSEAYDTSDKCRTPAWTDRVLWWRKKLPFEKTA 898

Query: 273 ESFSEILYNED---------------DIKSRGKRLSDHCPISI 300
              + +  +                        + SDH P+  
Sbjct: 899 GEINLLDSDLSADTKVRHTWTPGALMYYGRAELQASDHRPVLA 941


>gi|298208618|ref|YP_003716797.1| Endonuclease/exonuclease/phosphatase [Croceibacter atlanticus
           HTCC2559]
 gi|83848541|gb|EAP86410.1| Endonuclease/exonuclease/phosphatase [Croceibacter atlanticus
           HTCC2559]
          Length = 365

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 75/275 (27%), Gaps = 44/275 (16%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           N+    + + + ++  +V +   +   L    K  +AD++ L E             N  
Sbjct: 96  NVTEDEQHDSLKIYVANVLQKNKEPRFLIDEIKTANADVIILTETDKIWQKNIAPIVNAR 155

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
             +       N             + +  +   V  +   ++           +      
Sbjct: 156 YPYQVEVPQDNT----------YGMLLYSRKELVNPKVMFMVDDGIPSIHTKVKL----- 200

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
              N + + +  IH        +  ++      +L+ Q            +S +P ++ G
Sbjct: 201 --NNTQLVQLYAIHPTPPMPQHNPTSSDRDKEMMLTAQLA---------SKSELPVIVTG 249

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           DFN            ++ I     L               N   + P+D+  + ++    
Sbjct: 250 DFNDVAWSQTT--TLFQRIS--GLLDMRKGRGFFNTFNANNPLMRWPLDHMFVSEH---- 301

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     +   +I       SDH P      F
Sbjct: 302 ----------FRVIEIGLGNDINSDHFPFYASLSF 326


>gi|255567610|ref|XP_002524784.1| hydrolase, putative [Ricinus communis]
 gi|223535968|gb|EEF37627.1| hydrolase, putative [Ricinus communis]
          Length = 523

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/305 (10%), Positives = 81/305 (26%), Gaps = 77/305 (25%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFP 85
           + + S     ++     +        + +  K LDADI+ LQ++ +        ++ +  
Sbjct: 221 VRSQSAISSRNVVNGVDRDNYRSRRTVVEVLKELDADILALQDVKAEEEKEMKPLSDLAA 280

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                  ++      +             A+  K      +   +    D       R  
Sbjct: 281 ALGMNYVFAESWAPEY-----------GNAILSKWPIKRWEVQKIFDDTDF------RNV 323

Query: 146 VELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           ++  ++     ++ +   HL                 +   +Q   +         +  P
Sbjct: 324 LKATIDAPQKGEVNLYCTHLDHL------------DENWRMKQINAIIQ------STDGP 365

Query: 205 FVIAGDFN----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK----- 249
            ++AG  N          R  + +  +++  K     + +     +  +           
Sbjct: 366 HILAGGLNSLDETDYSAERWTDIVKYHEEIGKPTPKVEVMGFLKSKHYTDAKEFAGECES 425

Query: 250 ------------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                         +    +DY +   N+    +  S+S                SDH  
Sbjct: 426 VVMIAKGQNVQGTCKYGTRVDYILASSNSPYKFVPGSYSVYSSKGT---------SDHHI 476

Query: 298 ISIDY 302
           + +D 
Sbjct: 477 VKVDI 481


>gi|126735979|ref|ZP_01751723.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2]
 gi|126714536|gb|EBA11403.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2]
          Length = 287

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 74/286 (25%), Gaps = 80/286 (27%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            + A  +R+ S N+   +                 +   L    ++  AD+V LQE+   
Sbjct: 79  TADADDLRIYSKNMWFGN----------------RELDALAADIRDSGADVVTLQEVSPT 122

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           N               +  R I   +   +      IAV  +   V  +           
Sbjct: 123 N-----------RPMLADLRDIYPHQHLCSFSGWNGIAVLSREPIVQTK----------- 160

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             +  R      + +    +WV  +HL       +     + S  + S   + L+     
Sbjct: 161 -CSHRRAVAAAQINMGQGPVWVASVHLSWPFPYGN-----ARSAEVASDVLETLE----- 209

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                 P V+AGDFN            W     +       +               + +
Sbjct: 210 -----SPVVMAGDFNIFP---------WAQSVQSMQHAAALRVAQPVRPTFDLRGVPLLL 255

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+                          + RG   SDH  +  D  
Sbjct: 256 DHV-----------------HAPGGGTAQYRGLLGSDHLGVLADVS 284


>gi|15900654|ref|NP_345258.1| hypothetical protein SP_0760 [Streptococcus pneumoniae TIGR4]
 gi|14972234|gb|AAK74898.1| hypothetical protein SP_0760 [Streptococcus pneumoniae TIGR4]
          Length = 228

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 62/214 (28%), Gaps = 32/214 (14%)

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
                       N  H  +A+  K     ++   L+   D  +    RR       ++GK
Sbjct: 41  YYWTWAYNHIGYNRYHEGVAILSKTPIEARE--ILVSDVDDPTDYHTRRVALAETVVDGK 98

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
           ++ V  +HL  +      E     +                  K+   P ++AGDFN   
Sbjct: 99  ELAVASVHLSWWDKGFQEEWARFEAV----------------LKKLNKPLLLAGDFNNPA 142

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFL 270
              G        +   D+     ++  S     +    K       IDY    +      
Sbjct: 143 GQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKELA--- 199

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     +     ++  ++SDH  ++   ++
Sbjct: 200 ------VENLHVVFDGNKSPQVSDHYGLNAILNW 227


>gi|222445160|ref|ZP_03607675.1| hypothetical protein METSMIALI_00781 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434725|gb|EEE41890.1| hypothetical protein METSMIALI_00781 [Methanobrevibacter smithii
           DSM 2375]
          Length = 231

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 84/294 (28%), Gaps = 78/294 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++SWN               +  +    +     +  N DADI  +QE  +     ++
Sbjct: 1   MRIISWN---------------ANGKFREKFP----FILNEDADIYVIQECENP----EI 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  F S              + +  + +  KN   L                G R
Sbjct: 38  SNSDEYIEFASNYYW-------VGENQYYGLGIFAKNNVKL--------ELMDLDAKGLR 82

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-- 201
             + + V  +     +L +                          + +  +  + K+S  
Sbjct: 83  YFIPVNVNDD---FNLLGVWTNPDMDGTKTSYYP-----------KEITKYYEEHKDSEF 128

Query: 202 -LVPFVIAGDFNRKINYLGNND----DFWKTIDPNDSLIRFPK--------EKDSRCNAN 248
                +I GDFN  +   G++     +  + +     +  + +        E        
Sbjct: 129 FNEDMIICGDFNCDVRLKGSHAKNVCEVIEKLSECGLVDIYHQLTGEKEGEETKPTFYMY 188

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++L     +D+  M  +  K L                 +   LSDH P+  + 
Sbjct: 189 RHLDKPYHVDHIFMSSDKIKDLEICDA-----------DKWLHLSDHVPLIFEI 231


>gi|2120083|pir||I38588 reverse transcriptase homolog - human retrotransposon L1
 gi|483916|gb|AAB60345.1| ORF2 [Homo sapiens]
          Length = 1275

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 76/292 (26%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE         +
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQE-------THL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++T  +     R      + +       +A+                           
Sbjct: 47  MCRDTHRLKIKGWRK---IYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSILDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|323448897|gb|EGB04790.1| hypothetical protein AURANDRAFT_72441 [Aureococcus anophagefferens]
          Length = 2282

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/381 (10%), Positives = 86/381 (22%), Gaps = 100/381 (26%)

Query: 17   TASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQ 72
            +A    +VR+V++N+ +  L E               +    +        A   +V LQ
Sbjct: 1751 SACAGGRVRVVTYNVLSSSLCEPGYFVKCAAEDLSPPNRLKRVAALLDAEVAKGAVVCLQ 1810

Query: 73   EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------- 125
            E+      ++ +       F       +     +  + +  +AV   + +          
Sbjct: 1811 EV------SRDWSGELHAYFADKGYQFSTGLYGTKFNGYMGVAVAWPSGKYDVLGVDACR 1864

Query: 126  -----------------------------------------QSYPLLGAKDSFSRAGNR- 143
                                                     +  P             R 
Sbjct: 1865 IADTIAEPPRERRAKEAKPNFVVRAWRSLKRRAGHVATAATEPLPRGRPPFDTWNEAKRK 1924

Query: 144  --RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                V   ++  G   + +  +     F    +   S   S+  +Q   +   +  ++  
Sbjct: 1925 HNVLVTATLKEKGGDAFCVATYHMPCLFGSGQDKGDSTFGSVEKEQVMVIHSVLAAERAK 1984

Query: 202  ----LVPFVIAGDFNRKINYLG-------------------------NNDDFWKTIDPN- 231
                  P+V+ GDFN K                                  F   ++P  
Sbjct: 1985 RVAAGRPYVLCGDFNVKPYDASYALLTSGALGEAFAAYAPPPQADVAPARAFAPVLEPPL 2044

Query: 232  DSLIRFPKEKDSRCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSE-ILYNE 282
             S        +                      +DY       +K    +        + 
Sbjct: 2045 TSAYAAATGAEPDFTNFAYTKPMGGERDAFVETLDYIFCSAGQWKVAGVKELRSKHGLDT 2104

Query: 283  DDIKSRGKRLSDHCPISIDYD 303
                      SDH  ++ D +
Sbjct: 2105 SKPYPTADEPSDHVMLAADLE 2125


>gi|225711984|gb|ACO11838.1| TRAF and TNF receptor-associated protein [Lepeophtheirus salmonis]
          Length = 346

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 77/288 (26%), Gaps = 44/288 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
               LV+WN++ LS                     + +  ++    IVFLQE+       
Sbjct: 91  GDFSLVTWNVDGLSRAN-----------LKVRVKAVCKIIEDTKVGIVFLQEVIPLT--- 136

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +        +      +     +  +   ++    +     +           
Sbjct: 137 -----LNYFKEKLGNYIFVVGNEEDERLEYFNVICLRRFRIYMDSFQIIPY----NYSVM 187

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  + +   I   K+ +++ HL+S               +   +Q +     I +    
Sbjct: 188 GRNLLFVEAHIGKAKLILMNTHLEST----------KDHATTRIEQLKKCISIINKSASK 237

Query: 202 LVPFVIAGDFNRK----INYLGNNDDFWKTIDPND---SLIRFPKEKDSRCNANKNLRNK 254
               +  GD N +     +   N  D W T              +  +         + +
Sbjct: 238 ETTVIFGGDLNIRDKELTSLPPNFHDLWITNGSKKECNYTWDMTRNTNLEFPGR--FKPR 295

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +  D   +  N    +  + F  I    + I       SDH  I   +
Sbjct: 296 LRFDRLYIKYNENYDVKSDFFGLIG--IEKISGTQSFPSDHWGILTRF 341


>gi|126727629|ref|ZP_01743461.1| possible endonuclease/exonuclease/phosphatase family protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126703045|gb|EBA02146.1| possible endonuclease/exonuclease/phosphatase family protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 392

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/379 (13%), Positives = 89/379 (23%), Gaps = 107/379 (28%)

Query: 24  VRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + S+N+  L  ++QE     K S +        L      +DADIV  QE+    A+ 
Sbjct: 4   FSIASFNVKNLIGADQEYYRYEKYSPEEHAWKEDWLADQVVTMDADIVGFQEIFDKPALD 63

Query: 82  KV----------------------------FPKNTWCIFYSTERLINHSKRDSNNDIH-T 112
            V                            F K ++  +   +     +  D        
Sbjct: 64  AVIKEADALGEASNRDVIPDRSKRYARKAIFRKLSYKSYGDDKVFFAPNINDGEPGQRRP 123

Query: 113 AIAVRKKNVRV------------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
            +A+  +                L   +   G         +R  ++  + +NGK I V 
Sbjct: 124 GLAILSRFGFEGTPEVIQELNEPLTIQFGNDGDGHFTLTRLSRPILKARIPVNGKVITVF 183

Query: 161 DIHLKSF--------------------CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           + HLKS                                 +      +A  L+  I  +  
Sbjct: 184 NCHLKSKLGEFIRPEGAEFAPEQDLAAYDPFGRALGSLRATVRRMAEAAVLRGLILDELA 243

Query: 201 SLVPFVIAGDFNRKINYLGN-----------NDDFWKTI--DPNDSLIRFPKEK------ 241
              P ++ GD N     + +                +      ND       E       
Sbjct: 244 QNNPVMVLGDLNDSDTAVSSEIIHGENAFKNYSWMRRHNAKRHNDRYSDAENETIQAAIK 303

Query: 242 ----------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                                 +        ID  +M  +              ++  + 
Sbjct: 304 SAKLLSAEKLFVRKSLRDMVYTSAFGGVFESIDQILMSHHFDPTSDSRIGEMEYFSVLND 363

Query: 286 K---------SRGKRLSDH 295
                        K  SDH
Sbjct: 364 HLTDGSHPEAPYNKLASDH 382


>gi|294899045|ref|XP_002776473.1| CCR4-NOT transcription complex subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239883472|gb|EER08289.1| CCR4-NOT transcription complex subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 451

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/357 (9%), Positives = 85/357 (23%), Gaps = 82/357 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70
           ++ +  +R+ S+N+                 R             L+ +   +++ADIV 
Sbjct: 101 STDSTHLRVASFNVLGQRHIRTPLEPIFYHVRDCKEVVEFEYRAPLILRELFDVNADIVA 160

Query: 71  LQEMGSYN-AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            QE  +     A     + +  + + ++                +A +K     + Q   
Sbjct: 161 FQEADARFIDTASGALSSEYTFWLAEDKGRESEGNKGRRGEGCGLAFKKARFVKIGQKML 220

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIW------------------------VLDIHLK 165
            LG               L     G  I+                         + ++  
Sbjct: 221 ELGTDGLLQEFTPEEIAMLKERWAGVDIFKDVFDNLGMIGQLLTLKDKATSKLYIAVNTH 280

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
            +    +       +        + L+  + +  E++   +  GD N         +   
Sbjct: 281 LYHSPKAPHVKILQT----HMIMKALERLLAEIPEAVP--IFCGDLN----SSFPAEAVV 330

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNL---------------------------------- 251
             I   D        ++       N                                   
Sbjct: 331 DYITRGDMPADHRDWRNGPFFTWTNRECEGVDRSTVKGPLGIPLHHGVENLEHVPEEGYT 390

Query: 252 ----RNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    ID+   D+      + +       + + +         SDHC ++ ++
Sbjct: 391 NAVCGWAGIIDHIFYDRRHLRPVWSLPILSKADIESCNGALPYKFYGSDHCMLTTEF 447


>gi|170084023|ref|XP_001873235.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650787|gb|EDR15027.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 476

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 76/259 (29%), Gaps = 33/259 (12%)

Query: 11  FFLVPCTAS-VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +  +  + +     +R+++WN+             +   +      +L +   + +ADI+
Sbjct: 43  WLTLHTSETNHCLPIRVLTWNLLAQCLVRRQLFPASDCLKAGQREPVLHREILSHNADIL 102

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA------IAVRKKNVRV 123
            LQE+     +  V  K  +   + +     H    +      +      +   ++ VR 
Sbjct: 103 CLQEVDRLEQLLPVLQKAGYSHHFGSGPGKLHGSIIAYKAQRFSLVAEKVVYYDEERVRT 162

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVEL---------------------LVEINGKKIWVLDI 162
                   G        G   A+E                      ++ ++      + +
Sbjct: 163 DGSELGQRGVSFKTRNIGMIVALEANNNQSDSLVVATTHLFWHPKYVIPLHRLPAIEIGL 222

Query: 163 HLKSFCFLDSLENTYSPSCS-LLSQQAQWLKDWITQ----KKESLVPFVIAGDFNRKINY 217
            +          + Y   C   L++QA  L   +++          P ++AGDFN   + 
Sbjct: 223 DIPMKGPGRDFGSPYKYCCRFNLTRQAALLIREVSRFKVDHAVEEWPCIVAGDFNFPPDD 282

Query: 218 LGNNDDFWKTIDPNDSLIR 236
              +      +        
Sbjct: 283 PAYSLLSGDELLAEQQAKL 301


>gi|302784148|ref|XP_002973846.1| hypothetical protein SELMODRAFT_414230 [Selaginella moellendorffii]
 gi|300158178|gb|EFJ24801.1| hypothetical protein SELMODRAFT_414230 [Selaginella moellendorffii]
          Length = 471

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 73/263 (27%), Gaps = 46/263 (17%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNND 109
             + +  ++  AD++ LQE+ +        +  +         Y+               
Sbjct: 241 ASVFEVLRDSKADLIALQEVRAEEEKGMSPLTDLAEALGMHYAYAESWAP---------- 290

Query: 110 IHTAIAVRKKNVRVLQQSYP-------LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
                A+  +N+  +    P            D        + V  ++E   K    L  
Sbjct: 291 -EFGNAILSRNLLKVVVDVPSFGEVCYCCTHLDHLDEDWRIKQVSAILEDTKKVPHFLAG 349

Query: 163 HLKSFCFLDSLENTYSP-SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
            L S    D  +  ++  + +    QA  L+    +            D   ++      
Sbjct: 350 DLNSLNRPDYSQERWAEIAKASSFFQACQLRAENRKMAPRS-------DVMERLLVEKGY 402

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
            D      P    +   +E    C  N        IDY +   +     I  S+  +   
Sbjct: 403 MDSCAVASPEIPALVRGQEIQGTCKHNT------RIDYILASPHLQYRFIPGSYKVVS-- 454

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
                   +  SDH  +++D  +
Sbjct: 455 -------SRGTSDHHLVTVDIGW 470


>gi|298245685|ref|ZP_06969491.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM
           44963]
 gi|297553166|gb|EFH87031.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM
           44963]
          Length = 340

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/335 (10%), Positives = 84/335 (25%), Gaps = 73/335 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R+VS+NI        ++   N  ++ +     +    +++  DIV + E        +  
Sbjct: 3   RIVSFNI--------LAGGYNVREQGSKRTREICSILQSVKPDIVGVVEATHPQIQEQPR 54

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-------AKDSF 137
             +        + ++      S +     +A+  +   +  + +P  G            
Sbjct: 55  VIDEIAREMGMQLVMGGEPAYSGDYQ---LALLTRLPILETKIHPRPGILNKPLLEVSVE 111

Query: 138 SRAGNRRAVELLVEING---------------KKIWVLDIHLKSFCFLDSLENTYSPSCS 182
             +G R  V +                     ++I  +   ++       L   ++    
Sbjct: 112 EESGERLTVFVTHLWASFFKGRGGGALRKREVREILHILAPIQEEGRSHILMGDFNSLAP 171

Query: 183 LLSQQAQWLKDWITQKKESLV---------------------------PF--------VI 207
             + QA  L   +   ++                              P         V+
Sbjct: 172 GDTFQASELLRALVSLEQEKRSKHKFKNYADGVPTLNYVVPPPLRFLIPVLRIIPRSQVL 231

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
           +G FN   +           +          +           +     IDY        
Sbjct: 232 SGLFNLAASLYAPRASIGLLLKAGYVDCFRKRAPRDPGFTCPAIAPAGRIDYIFATPELA 291

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + L Q     +          G   SDH  ++  +
Sbjct: 292 QRLEQCQPILMG-----NGVLGSAASDHLAMTASF 321


>gi|71654548|ref|XP_815891.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL
           Brener]
 gi|70880981|gb|EAN94040.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi]
          Length = 612

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 63/228 (27%), Gaps = 23/228 (10%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++SWN+         + W ++ +    D+  +  + +   ADIV LQE+    A  +  P
Sbjct: 3   IISWNV---------AGWSSTSRMIREDFGSIASFLQRTQADIVCLQEVKGSWAKLEADP 53

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                         +   R    D   +                    KD      +R  
Sbjct: 54  C---------GMGASDGGRTLAIDGWESFWSFSGKAHRGFNGVVSFVRKDLTWWCDSRPF 104

Query: 146 VELLVEINGKKIWVLDIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            E  +   G+ I          +   +++                + L   + ++  +  
Sbjct: 105 SEEDLNDEGRVIVTCHSAFVVVNTYVVNARHGQRMAFKMRFLSSLKNLLTRLKKQ--TGK 162

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           P ++ GD N+      +     + +            +     A K  
Sbjct: 163 PVILLGDLNQTY-RAEDACWSLRRLSLPALRNLVHVCQAGGEEAEKTW 209


>gi|73973941|ref|XP_854759.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 72/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y ++     +              +            L G           
Sbjct: 54  LKIKGWRTIYHSKGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN          K N          T+D  D    +     +           
Sbjct: 141 --LILGDFNLALSILDRSSKHNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|271969544|ref|YP_003343740.1| hypothetical protein Sros_8349 [Streptosporangium roseum DSM 43021]
 gi|270512719|gb|ACZ90997.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 334

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 83/288 (28%), Gaps = 63/288 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A+    +R+++ N+     +                   +    + L  D++  QE+
Sbjct: 105 SSEAAAGTPLRVLTLNMLFGGAEP----------------EPVTALVRRLRPDVLSTQEL 148

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +                    RL+      S + ++                YPL   +
Sbjct: 149 TAEMVEKLDAAGLR---ELLPYRLLAPDHGASGSGLY--------------ARYPLDPLE 191

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F   G+      +V    K + V+D+H                    + +  + L+ +
Sbjct: 192 GMFRPVGHNMPAATIVLPGVKPVEVVDVHPYPPL------------EEHVREWTEALEAF 239

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                      ++AGDFN  +++        +      S  R  +       AN+ +   
Sbjct: 240 --PPAVPDRIRILAGDFNASLDHAAMRRFLSRGYVD--SADRAGQGLTPTWPANERIPPL 295

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           I ID+ V+DQ     + + S   +               DH  +  D 
Sbjct: 296 ITIDHVVVDQ--RVKVNEVSVHTVPGT------------DHRAVFADL 329


>gi|320104396|ref|YP_004179987.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
 gi|319751678|gb|ADV63438.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
          Length = 426

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/405 (8%), Positives = 96/405 (23%), Gaps = 105/405 (25%)

Query: 3   RKYVLALVFFLVPCTASVAQKV---------RLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           R +   L+     C  +  + +         R+ ++N+ +L+  +   L  +        
Sbjct: 6   RVFSAVLLMACWSCPLNAQEPLVPPKPPGCIRVATFNV-SLNRPQAGGLIASLATPDDPQ 64

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK---------- 103
             ++ +  + +  D++ L E         +    T  +  S                   
Sbjct: 65  ARVIAEVIQRVAPDVILLNEFDYDPDGVALDAFQTRYLAVSQNGAPPRIFPHHLIGPVNT 124

Query: 104 ----------------------------RDSNNDIHTAIAVRKKNVRVLQ--QSYPLLGA 133
                                           +     +A+        +  + +  +  
Sbjct: 125 GVPSGRDLDKNGQIVGQPGQRGYGEDCLGYGQHPGQYGMALLSVYPIRREALRDFQTVLW 184

Query: 134 KDSFSRAGNRRAV---------------------ELLVEINGKKIWVLDIHLKSFCFLDS 172
            D  +    R                        ++ ++I+G  + +L  H     F   
Sbjct: 185 SDMPNPMLPRNPQGNPWYDAEDLKVFRLSSKSHWDVPIDIDGVSLNILASHPTPPAFDGP 244

Query: 173 LENTYSPSCSLLSQQAQWL----------KDWITQKKESLVPFVIAGDFNRKINYLGNND 222
                + +   +   A +L             +    E    F I GD N        + 
Sbjct: 245 ERRNVARNHDEIRLWADYLSGPPKSSWLNAKGVHGSLEPPRWFAILGDLNSDPFDPPGSL 304

Query: 223 DFWKTIDPNDSLIRFPK-------------------EKDSRCNANKNLRNKI----PIDY 259
           +  + +  +  +    +                    +        +  ++      +DY
Sbjct: 305 NAIRQLLEHPRVDASFRPESPGAVEAARIQGQANRDHQGDPRYDTADFDDRAVGNLRVDY 364

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +  +                +        +  SDH  + +D D+
Sbjct: 365 VLPARGLTVR-GGGVVWPRSDSPWARLVDPETSSDHHLVYLDLDW 408


>gi|322493091|emb|CBZ28375.1| putative pantothenate kinase subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 1461

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 87/327 (26%), Gaps = 64/327 (19%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKV 83
           R++S+N N L    G              +  +  +  ++DA D+V LQE+ + +    +
Sbjct: 12  RVLSYNFNILPRGSGGY-----------QHERIETFLASVDAYDVVLLQEVYATSYFPYL 60

Query: 84  FP-KNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLLGAKDSF 137
              +  +                  +   +        V   N  ++   +P+       
Sbjct: 61  MQKQLCYQKMLLDGLEAKGFHHYVISRQPSYLTMLRYNVCSDNGLIIASRFPVWHRGSYT 120

Query: 138 SRAGNR-------RAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            R   R         +   VE+    GK    +          D+L +  S    +    
Sbjct: 121 FRNRERGEATVSKGCLFAEVEVPATQGKGSQRIVFFNVHLRPEDNLPSESSQMQQVHRFV 180

Query: 188 AQWLKDWITQKKESL-----------VPFVIAGDFNR------KINYLGNNDDFWKTIDP 230
              L     Q  E             VPF+IAGDFN         +      +       
Sbjct: 181 VAALAQVREQHTEGDGPAALRQRGAEVPFIIAGDFNIHGIDPLNGHPSKRFQEMLNQFQD 240

Query: 231 NDSLIRFPKEKDSRCNAN--------------KNLRNKIPIDYFVMDQNAYKFLIQESFS 276
             S+     ++  +                  +        DYF+        +  E   
Sbjct: 241 IGSVRDVIYDETGQNPPTRPPILFFPELSKLERYESTPQRQDYFLAT----TCIQVEMPR 296

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303
              Y     +     LSDH  I+    
Sbjct: 297 LEKYVVSSRRPYTY-LSDHFGITCRVT 322


>gi|326664781|ref|XP_003197884.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1143

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 75/295 (25%), Gaps = 77/295 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + + N+                 R       +  + K+ ++D+  LQE      +  +
Sbjct: 3   LTITTINVR--------------SVRAIVRAQSILSFLKSFNSDVFLLQECS----LPFL 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   ++    I        ND    +A+  KN  +L +   ++            
Sbjct: 45  TNYRKWEEIWTPGLSIWSGSNFIKND---GVAILIKNPNILVKGSTVVRDGR-------- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+   +    +   VL+++  +                    +   L + +        
Sbjct: 94  -ALLAHLAFLEQDFNVLNVYGFNN-----------------KHERHELLEDLQPHMLGKA 135

Query: 204 PFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P V AGDFN  +                         K     D      + ++     +
Sbjct: 136 PLVFAGDFNCVLTSKDRKGKTDDFRVDKTSVLLQGIAKDFKLVDCFKTLHQREEGFTWFS 195

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +      IDY          +I                     SDH  +S  + 
Sbjct: 196 SDCTRASRIDYIFARD-----IIPSDARLTPV----------FFSDHHMLSCTFS 235


>gi|315633994|ref|ZP_07889283.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
 gi|315477244|gb|EFU67987.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
          Length = 292

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 92/282 (32%), Gaps = 63/282 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +  RL+ WN++           K              Q     + DI+ LQE+ +   +A
Sbjct: 71  KTFRLLVWNLH-----------KGQDAGWQEALERFAQ-----ERDILLLQEVLNTQGLA 114

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                     +  +     ++   +     + + +  +        Y      + + R  
Sbjct: 115 --------AQYSLSFPTALYASAFAYLQQQSGVEILSQF---APHFYCAGSKPEPWIRIP 163

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              A   L   N + + ++++HL +F    +              Q + L   ++Q +  
Sbjct: 164 KVGAAMSLPLPNRQALLLVNVHLINFEINPTAYEE----------QLRTLMQLVSQHQG- 212

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P V++GDFN   ++ G      + +     LI  P  +D R     N      +D+  
Sbjct: 213 --PLVLSGDFN---SWNGYRMRIIRELIKEFGLIEVPFAQDHRLRFLGNP-----LDHVF 262

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +             + +    +  +S     SDH P+ +D +
Sbjct: 263 VRG----------LNVLNATTEPTES-----SDHAPLLLDLE 289


>gi|298710453|emb|CBJ25517.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 411

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/360 (10%), Positives = 82/360 (22%), Gaps = 102/360 (28%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--------- 75
            +V++N+N             +  R   ++  ++ + +    D+V  QE+          
Sbjct: 70  TIVTFNLN------------GASPRLAKNWNEIKGFLEEHKPDLVCFQEVRLPAKGVPKA 117

Query: 76  --------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN----------DIHTAIAVR 117
                       +      +   I      L   ++R                  A+   
Sbjct: 118 KKEDDTGRKRWQLKDDTAADRKDIALVDRTLRALARRLGYRLVMSLANSKYAGTAALIST 177

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS---FCFLDSLE 174
              V  +         +   S       +  L + + ++  V+ I   S           
Sbjct: 178 WGAVFAITPVTIAFAGRLGLSALDLPEPLGKLFKEHDREGRVIAIEYPSVTVLALYVPNN 237

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW--------- 225
            + + S     +    L  ++ +        +I GD N            +         
Sbjct: 238 GSKAESFQRRRRWDDELCGFVDKYSGK---LIITGDLNVAHEDADLTHASFFKGMFPAAN 294

Query: 226 -------------------------KTIDPNDSLIRFPKEKDSRCNA------------- 247
                                      +D    L   P                      
Sbjct: 295 PEDSGQPGCTPAEKRRHSRLLASGGGLVDAYRRLNPVPAAGAGGARTEMEGMTWRGTAGN 354

Query: 248 -----NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +     + IDYF++       + +        + D     G   SDHCP+ +  
Sbjct: 355 QVAAMGRYYGKGMRIDYFLLSTALAPRIKEVKVFGSGADRD-----GFLGSDHCPLMLTL 409


>gi|225860585|ref|YP_002742094.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298229188|ref|ZP_06962869.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255846|ref|ZP_06979432.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502377|ref|YP_003724317.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae TCH8431/19A]
 gi|225727428|gb|ACO23279.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298237972|gb|ADI69103.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae TCH8431/19A]
 gi|327390321|gb|EGE88662.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA04375]
          Length = 333

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNALPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVRDLDIVSFQNSDHRCIFTEITF 333


>gi|186686599|ref|YP_001869795.1| phytase [Nostoc punctiforme PCC 73102]
 gi|186469051|gb|ACC84852.1| phytase [Nostoc punctiforme PCC 73102]
 gi|326635604|gb|ADZ99371.1| beta-propellar phytase [Nostoc punctiforme PCC 73102]
          Length = 1417

 Score = 55.3 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/377 (10%), Positives = 87/377 (23%), Gaps = 99/377 (26%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             +R   +N  +L+      L  +      +    + +  +  + D++ + E        
Sbjct: 5   NTIRFSQFN-ASLNRSTQGQLAADLSTPNNAQAKAIAEIIQRNNPDVLLINEFDYSQEAV 63

Query: 82  KVFPKNT------------WCIFY------------------------STERLINHSKRD 105
           K+F +N             +  FY                         T    + +   
Sbjct: 64  KLFQQNYLAISQNGATPVDYPYFYIAPSNTGIASGFDLNNNSAVVTTPGTSGYGDDAFGF 123

Query: 106 SNNDIHTAIAVRKKNVRVLQQ------------------SYPLLGAKDSFSRAGNRRAVE 147
            +      + +  K                           P     + +        + 
Sbjct: 124 GDFPGQYGMLLLSKYPIDTANIRTFQNFLWKDMPNALLPDDPTTPQANDWYSQEELALLR 183

Query: 148 --------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK----DWI 195
                   + +E+NGK I  L  H     F  + +     +   +   A ++     ++I
Sbjct: 184 LSSKSHWDVPIEVNGKTIHALVSHPTPPTFDGAEDRNGKRNHDEIRFWADYITPGNGNYI 243

Query: 196 TQKKES------LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK-------- 241
              +           FVI GD N       + D+  + +  N  +               
Sbjct: 244 YDDQGKTGGIAAGSDFVIMGDQNADPLDGDSYDNAIRQLLQNPGINTNVIPTSFGGPQQA 303

Query: 242 ---------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                              +        +  DY +   +         F  +  +     
Sbjct: 304 ALQGGANVSQKGNPSFDTADFADTAPGNLRTDYVLPSADLTI-TDSGVFWPLNNDPAFSP 362

Query: 287 SRGKRL--SDHCPISID 301
                   SDH  +  D
Sbjct: 363 VGTFPFPSSDHRLVFAD 379


>gi|297161073|gb|ADI10785.1| endonuclease/exonuclease/phosphatase [Streptomyces bingchenggensis
           BCW-1]
          Length = 271

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 85/306 (27%), Gaps = 56/306 (18%)

Query: 10  VFFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           +F L P  A   +   + RL+++N    S            +R+      L        A
Sbjct: 6   LFLLTPPEAVHEASTDEARLITFNAQHASA-----------ERSRRQAEWLA---GQEAA 51

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D+V + E+GS      +        + S   L +        D  T +A R   +  +  
Sbjct: 52  DLVVMTEVGSGPGGQALVTALAQRGYRSVLALPS-----GRPDYRTVLASRSAELEAVDS 106

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
              +L  +               V I    + +L +++ S             +    + 
Sbjct: 107 GIGVLSHRGP----------AARVRIGSHTVGLLGLYVPSRGP------KERRNEDKRAF 150

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDD---FWKTIDPNDSLIRFP 238
           Q            +   P +++GD N        ++         F+++      +  F 
Sbjct: 151 QGAVTDAVPGLLAQFDGPVIVSGDLNVVEPGHVPHHAVFGKWEYSFYRSFVDAGLIDAFR 210

Query: 239 KEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                    +   R       D+  +     +++    +                L+DH 
Sbjct: 211 HLHPDAAEHSWFGRGGDGYRFDHAFVTARHGEYVRTCQYLHEPR--------ELGLTDHA 262

Query: 297 PISIDY 302
            + +  
Sbjct: 263 AMFLRL 268


>gi|149173168|ref|ZP_01851799.1| hypothetical protein PM8797T_28299 [Planctomyces maris DSM 8797]
 gi|148847974|gb|EDL62306.1| hypothetical protein PM8797T_28299 [Planctomyces maris DSM 8797]
          Length = 243

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 72/270 (26%), Gaps = 49/270 (18%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT 88
           WN           L             LL +  +    +++ L E       A + P++ 
Sbjct: 6   WNTQWAVPGSKRGL-------------LLSELIQQQQPELICLTEAQ-----AGLLPRDG 47

Query: 89  WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
             I  S                   + +  K+       +                 +  
Sbjct: 48  HVIESS------PDYGYPIKPGRRKVILWSKHPWNEVSQH-----------EQLNFPLGR 90

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
           +V    + + +L + +       S       +          L+  +  + +  VP  I 
Sbjct: 91  IVSGITRGVRMLGVCIPWNAAHVSSGRKDRKNWEDHLLYLDALQQLL-TELDQQVPLAIT 149

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GDFN+++         ++ ++                + N        ID+     +   
Sbjct: 150 GDFNQRLPRSRQPKYAYEKMNA-----VLSLGLTVHTSGNLGPEGAQLIDHMATTSDLQ- 203

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  + +    D + + G RLSDH  +
Sbjct: 204 ---FNGLTVL----DRVSTEGVRLSDHFGV 226


>gi|332030472|gb|EGI70160.1| Protein angel-like protein 2 [Acromyrmex echinatior]
          Length = 554

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 24  VRLVSWNI---NTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           ++L+S+NI   N L +   + +  N       +  +L+ Q     +A+I+ LQEM   + 
Sbjct: 163 LKLLSFNILAQNLLEDHLYLYMNHNKKALSWKTRKSLVIQEIFEAEANIICLQEMQEEHL 222

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +  V P      F        + KR ++      +  R  +  +   +   L        
Sbjct: 223 LDFVAP------FKQHGYEYLYKKRTNDKKDGLLLLYRSNDFILSDYAKVELYQPGIEIL 276

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             +   +   + +       + I      +     +       LL  + + +        
Sbjct: 277 NRDNVGIIAKLALKDNPEAQIVIATTHLLYNPKRNDVRLAQIQLLLAEIERIAFIENTTT 336

Query: 200 ESLV-PFVIAGDFNRKI 215
                P ++AGDFN + 
Sbjct: 337 GPKYLPIILAGDFNLEP 353


>gi|118586338|ref|ZP_01543790.1| exodeoxyribonuclease A [Oenococcus oeni ATCC BAA-1163]
 gi|290891237|ref|ZP_06554299.1| hypothetical protein AWRIB429_1689 [Oenococcus oeni AWRIB429]
 gi|118433229|gb|EAV39943.1| exodeoxyribonuclease A [Oenococcus oeni ATCC BAA-1163]
 gi|290479201|gb|EFD87863.1| hypothetical protein AWRIB429_1689 [Oenococcus oeni AWRIB429]
          Length = 273

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 80/301 (26%), Gaps = 56/301 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +  +SWNI++L+        ++   R    Y  L +       D   +QE          
Sbjct: 1   MNFISWNIDSLNA-----AIQHKSPRGELTYKTLEK-IAAAKPDFFSIQETKLPENGLNK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        +        +  +    K   +     P++ A D+  + G  
Sbjct: 55  KQDEVLEELFPNYLRFVKNSTPPAKKGYAGVMTLAKEAPI-SYDKPVIDAPDTMDQEGR- 112

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      ++L+++  +                        L +          
Sbjct: 113 ---IVTLEYPD--FYLLNVYTPNSGDGLRRLPARGKWDDQFRHYISDLSER--------K 159

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             + +GD N     +                   + F + +          +       +
Sbjct: 160 IVIFSGDLNVAHEEIDLKNSSSNHNSAGFTDQEREKFSRLLSAGFIDTWRLQHPKEIAYS 219

Query: 248 NKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             + RN+          IDY+++  +A + +++    +                DH PI 
Sbjct: 220 WWSQRNRLAKTNNAGWRIDYYIVSNSAKEKIVKTGMIDTGTRA-----------DHAPIY 268

Query: 300 I 300
           +
Sbjct: 269 L 269


>gi|326799489|ref|YP_004317308.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326550253|gb|ADZ78638.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 351

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/244 (11%), Positives = 57/244 (23%), Gaps = 45/244 (18%)

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               + D+V L E      +        +                   +    + +  K 
Sbjct: 122 ITRANPDVVLLLETNKRWDLETRSLSQEY-----------PYHVRVPLENTYGMLLYSKL 170

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                +   L+                +L   +G ++ +  +H       ++  +T    
Sbjct: 171 PLSATKIGYLVEKDIPSIH-------CVLTLRSGLEVQLYAVHPTPPVPNENPRSTERD- 222

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L       K S  P ++ GD N               +  +  L      
Sbjct: 223 --------KELLLIADLAKRSSRPVIVIGDLNDVAWSYTTEL----FLKMSGLLDPRRGR 270

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                        + P+D+     +                  ++K      SDH PI I
Sbjct: 271 GFYNTFHAHYPFLRFPLDHAFFSTDFKLR--------------ELKRLSNFNSDHFPIFI 316

Query: 301 DYDF 304
              +
Sbjct: 317 KIQY 320


>gi|301624324|ref|XP_002941454.1| PREDICTED: sphingomyelin phosphodiesterase 3-like [Xenopus
           (Silurana) tropicalis]
          Length = 485

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 80/297 (26%), Gaps = 73/297 (24%)

Query: 64  LDADIVFLQEMGSYNA---VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
             AD + LQE+    A   + ++   +   I Y       +       +    +A R   
Sbjct: 196 EGADFLCLQEVFDGRAARKLRRLLAPSFPHILYDVGPSGPYRCGFRFFNSGLFLASRYPP 255

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           +      YP    +DS +  G    V++ V +N ++  ++           +  +     
Sbjct: 256 LAAKYFCYPNARGEDSLAAKGL-LCVKVQVGVNEEQQRIV------GYINCTHLHAPEAD 308

Query: 181 CSLLSQQAQWLKDWITQKKESLVPF-------VIAGDFNRKINYLGNN------------ 221
             +   Q   L  W+   +             V+ GD N       ++            
Sbjct: 309 SCVRFDQMSHLLQWVADFQSENSEAGEVAVFDVLCGDLNFDNCSADDHLEQTHHLFEAYR 368

Query: 222 -----------------------------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                                                  +++D     +  P  ++   +
Sbjct: 369 DPCRDCAGRDRPGALGTLLRAEHLYHEAVNTPENMKRTLQSLDERKLYLAPPLPQNPSTD 428

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     IDY +   +        SF   + +     ++   LSDH PI++   
Sbjct: 429 VQHWTGR--RIDYILYRHS-------TSFPPTVVDRFQFITQLAGLSDHIPIALRLS 476


>gi|171676872|ref|XP_001903388.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936503|emb|CAP61163.1| unnamed protein product [Podospora anserina S mat+]
          Length = 380

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/369 (11%), Positives = 96/369 (26%), Gaps = 94/369 (25%)

Query: 15  PCTASVAQKVRLVSWNINT--------------LSEQEGVSLWKNSVKRTTSDYT--LLR 58
               + +   R+ SWNIN                 +       + S  +T  + T   LR
Sbjct: 19  SSPETKSHSFRVFSWNINGVDAFLPPTNSKITTFFKPTNSPSGRASPPKTDHETTSNSLR 78

Query: 59  QYAKNLD-ADIVFLQEMG----SYNAVAKVF--------------PKNTWCIFYSTERLI 99
            +    +  +++FLQE+         VA +                + T+ +     R  
Sbjct: 79  AFLSRHNWPEVLFLQELKIKQGDCKTVAALLTAINSPLSKSDVLSQERTYTLDTVLPRDK 138

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKK 156
            + +            +RK           +   +++      R ++ + ++      + 
Sbjct: 139 YNVRGFQGKLYGVGTIIRKDF-----ARGHVSLIREADWDLEGRVSI-VELKKGLGQDRP 192

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ----AQWLKDWITQKKESLVPFVIAGDFN 212
           + +L+I+  +             +              L+D   + +      V+AGD N
Sbjct: 193 LALLNIYAVNGTSSPYRSPDTGKAVGTRHDHKIVFHSRLRDECLELEAQGYNVVVAGDLN 252

Query: 213 RKIN----------------------------------------YLGNNDDFWKTIDPND 232
                                                                  ID   
Sbjct: 253 VARGVLDGHPNLRTYPSQHCLNRADFNAKFFGQEDNKRARAHVRTSNEKQACLDAIDVFR 312

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           +L R  +             +   +D  +  +  ++  +  S   +         + +  
Sbjct: 313 ALHRTERRYTYHPRTAHWGSSSDRVDLILASKRLWEEGLVLSTGIL------DSPQERGP 366

Query: 293 SDHCPISID 301
           SDH P+ ++
Sbjct: 367 SDHVPLWVE 375


>gi|26348875|dbj|BAC38077.1| unnamed protein product [Mus musculus]
          Length = 260

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 61/211 (28%), Gaps = 30/211 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 2   LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57

Query: 81  -AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136
              +         +S  R           D  T +A           L       G  D 
Sbjct: 58  PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDISCYGNMDE 117

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                 +E   K + +++++                    LL
Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
             +A+ L         +    +I GD N   
Sbjct: 178 QMRAEALLA-------AGSHVIILGDLNTAH 201


>gi|325108441|ref|YP_004269509.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
 gi|324968709|gb|ADY59487.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
          Length = 327

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 78/288 (27%), Gaps = 71/288 (24%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P T    Q +RL+ WN   L                      +    +  DAD+V L E 
Sbjct: 107 PETNPPEQPIRLLFWNTAHL----------------KHGLDAIAADIQTYDADVVALVES 150

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           G  +   +   +  +  +                              +L          
Sbjct: 151 GPASERYRGLWQERFPDY---------------------NITLFGAEMMLLVRDGYSMDV 189

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D+   AG  R     VE+  +   ++ + +     +D                 + L   
Sbjct: 190 DARQLAGLSRLRSATVEVADQSFRLMLVDIAGRPDID------------RQPHLEQLAAE 237

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + Q +    P +IAGDFN   +        ++ ++       F +  +            
Sbjct: 238 VQQNQS--QPIIIAGDFNTPRDS-----FLFQPLE-GLVRNAFDEVGEGYAPTWPVPFPV 289

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +D    ++       Q                  + SDH P+ +++
Sbjct: 290 LTLDQVWGNRGVAFRSCQH--------------DWSKRSDHRPVLVEF 323


>gi|146099120|ref|XP_001468563.1| hypothetical protein [Leishmania infantum]
          Length = 465

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 68/260 (26%), Gaps = 43/260 (16%)

Query: 24  VRLVSWNINTLSEQEG-------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            R+V++NI                    + +    +    + Q       DIV LQE G 
Sbjct: 45  FRVVTYNILYDDFCTSKSSKAKIYPFATDDILDLENRKVRIVQELLAYHTDIVCLQECG- 103

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--- 133
                 VF      +  +      +  +  +         R+   +++Q +   L     
Sbjct: 104 ----RDVFQSYFLPVMRACGYDGVYCNKSGSVKEGCGFLFRESRFQLVQHASVPLNFQTL 159

Query: 134 --------KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                       +      A+  +  I  + +       K     ++    ++ +C +  
Sbjct: 160 STMFPELAGRVGACPELEEALSAVTSIGARVVLRESTSDKEIVVGNTHLFYHANACHIRV 219

Query: 186 QQAQWLKDWITQ--------------------KKESLVPFVIAGDFNRKINYLGNNDDFW 225
            QA  L  W++                     +     P V+ GDFN             
Sbjct: 220 LQAYMLLHWLSDATLISPGGDAATSPSPSLANRARPRRPLVMCGDFNCTHATGAYRLLTT 279

Query: 226 KTIDPNDSLIRFPKEKDSRC 245
             ++ +       +     C
Sbjct: 280 GQVEADHPSWDKGRLFWWGC 299



 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 1/71 (1%)

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF-SEILYNEDDIKSRGKRLS 293
             + +   S    N  L  +  IDY    +++ + L      SE    E+      K  S
Sbjct: 392 DAYHRTDLSLPWTNFTLTFREVIDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPS 451

Query: 294 DHCPISIDYDF 304
           DH  +  D  F
Sbjct: 452 DHVALVADLAF 462


>gi|78046828|ref|YP_363003.1| hypothetical protein XCV1272 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78035258|emb|CAJ22903.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 443

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/379 (11%), Positives = 89/379 (23%), Gaps = 103/379 (27%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             A ++R+ ++N +  S++ G  + +       +    +    + +  D+V L E   ++
Sbjct: 68  PAAAQLRIATYNTSLYSDEAGGLIRELQGDSAHAR--KIAAVLQRVRPDLVLLNEF-DFD 124

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNND----------------------------- 109
              +             +     + R                                  
Sbjct: 125 PEHRAADLFQQRYLQVAQPGGGEALRYPYRYLAPVNTGVPSGLDLDNNGSTGGEGRARGN 184

Query: 110 ---------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------AVEL 148
                        + V  +     Q        K S      R             A+  
Sbjct: 185 DAWGYGLHPGQYGMLVLSRYPIDAQAVRSFQLLKWSALPGALRPIDPASKTSYYSDAIWA 244

Query: 149 LVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----- 191
            + ++ K             +  L  H     F  + +   + +   L     +L     
Sbjct: 245 QLRLSSKSHWDVPVRTPLGVVHALVSHPTPPVFDGAEKRNAARNHDELQLWRAYLDNAPE 304

Query: 192 -KDWITQKK------ESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            + W+   K       +   FVI GD N    +  G +      I+    L       D 
Sbjct: 305 SQRWLCDDKGGCGGLAADARFVILGDLNNDPVDGAGRHAAIRALINHPRVLHYPTPRSDG 364

Query: 244 R---------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                                           + +DY +  +     +    F       
Sbjct: 365 GPEKTAEYAALGIAHSGDPHQVTGDFGPQAGTMRLDYVLPSRQFT-LIGSGIFWPASSAP 423

Query: 283 DDIKSRGKRLSDHCPISID 301
           +   + G   SDH  + +D
Sbjct: 424 EAAIADG---SDHHAVWVD 439


>gi|227877707|ref|ZP_03995743.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           crispatus JV-V01]
 gi|227862695|gb|EEJ70178.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           crispatus JV-V01]
          Length = 339

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/328 (9%), Positives = 92/328 (28%), Gaps = 60/328 (18%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL------------------LRQYA 61
             +  +  ++N+   +       + +S +                          + Q  
Sbjct: 26  AGRSYKATTYNVGFGAYNHDFDFFMDSGQLKDGKKLQGHRGTAISKQAVLDSTNGVIQTM 85

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           K  + D +F QE+ + +   + F  N           ++ +   + +    A+ +   + 
Sbjct: 86  KKQNPDFMFFQEIDTDS--TRSFHVNQVKKVEDDFPKMDSTFASNFHSAFLAVPLNNPHG 143

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCF---LDSLEN 175
            V      +   K   +         + +E      +   V+   + +      ++S  +
Sbjct: 144 TVRSGVLSMSKYKMDSAIRRKYPVSSVPIEKFVDLDRCFVVMRFPVTNGKDLVMINSHMS 203

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------NYLGNNDDF-- 224
            Y     +   Q + +   + ++       ++ GDFN  +         +          
Sbjct: 204 AYDKGGKMRKAQMKLISSVMEKEYRRGNYVIVGGDFNHALGKDMMTHFEHQEEIPSWVSV 263

Query: 225 ---------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                    +  I   +        + +    +  +      D F++ +N    +     
Sbjct: 264 LDQKMLSKDFTMIKAQNRENVAT-VRATDMKYDPKVNYMTICDGFIVSKNVQAKV----- 317

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
               YN +          DH P+ ++++
Sbjct: 318 ----YNINTHFEYA----DHNPVRLEFE 337


>gi|73981671|ref|XP_848422.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform
           2 [Canis familiaris]
          Length = 1275

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFNRKINY---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN  ++                   T+D  D    +     +           
Sbjct: 141 --LILGDFNLALSILDRSSKQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|290981678|ref|XP_002673557.1| predicted protein [Naegleria gruberi]
 gi|284087141|gb|EFC40813.1| predicted protein [Naegleria gruberi]
          Length = 416

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 72/217 (33%), Gaps = 23/217 (10%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++L+S+N+          +  N      +    L    K  + DI+ LQE+ S  +   
Sbjct: 67  DLKLLSYNVFM-----RPIVKTNKSDYKDARLDELIIKMKEDNFDIICLQELFSTASNRL 121

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  F       N  K      I + + +  +   V + S+      +       
Sbjct: 122 SKLLKEFSDFEHVHLSRNTWKL---KPIDSGLVIMSRFQIVERDSFIFSQGSNIDGYT-T 177

Query: 143 RRAVELLVEINGKK------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           +  + +L++I+ K       + + + H ++   L            +   Q   +  +I 
Sbjct: 178 KGVLSVLLDISKKDSQEKKYLLIFNTHTQANYDLKDESY-----WKIQQSQVSEMAIFIH 232

Query: 197 QKKE--SLVPFVIAGDFNRKINYLGN-NDDFWKTIDP 230
           +K +  S V  ++ GDFN          +     ++ 
Sbjct: 233 RKMKQFSGVSALVCGDFNIDARNKPEWYNWMMDRLNE 269


>gi|326319964|ref|NP_001191852.1| protein angel [Acyrthosiphon pisum]
 gi|328726434|ref|XP_003248895.1| PREDICTED: LOW QUALITY PROTEIN: protein angel homolog 2-like
           [Acyrthosiphon pisum]
          Length = 438

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 67/235 (28%), Gaps = 18/235 (7%)

Query: 24  VRLVSWNI---NTLSEQEGVSLWKN-SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             L+S+NI     L +   +  W +  V        LL +  K  +ADI+  QE+   + 
Sbjct: 66  FSLLSYNILAQELLEKNAFLYDWSDVRVLNWDYRRQLLLKEIKQFNADIICFQEVQESHL 125

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    +           + KR   +    AI  R     + ++             
Sbjct: 126 ------NWFFKKLSDLGYNGVYKKRTRFHCDGCAIYYRNDKFTLKEKVTVEYNQPGINVL 179

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-----DW 194
             +   + L +     +   + +      +     +       LL  + + +        
Sbjct: 180 DRDNVGIVLRLSPRKNEAENIIVSTTHILYNKKRHDIKLAQVHLLLAEIERVAYKGHKKV 239

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI---DPNDSLIRFPKEKDSRCN 246
                    P ++ GDFN + N    +      +   +     +     +  RCN
Sbjct: 240 GDDNIPEYHPIILTGDFNLEPNTAVYDFLINGALFYSNLQKPTLWSQNNQSGRCN 294



 Score = 37.2 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 7/58 (12%), Positives = 14/58 (24%), Gaps = 1/58 (1%)

Query: 248 NKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +        +DY      N       +  +                SDH P+   + +
Sbjct: 378 STYHDQWTIVDYIFYTSTNLKLKAYMKLPNVAECQPILAMPNRVSPSDHLPLFAKFIY 435


>gi|224141851|ref|XP_002324275.1| predicted protein [Populus trichocarpa]
 gi|222865709|gb|EEF02840.1| predicted protein [Populus trichocarpa]
          Length = 380

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/219 (12%), Positives = 65/219 (29%), Gaps = 14/219 (6%)

Query: 15  PCTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIV 69
                 +++  ++S+NI  + L+      L+ +  +           +        ADI+
Sbjct: 8   TAPPRDSERFIVLSYNILADYLAINHRSKLYYHIPRHMLDWEWRKRSIIFELGLWSADIM 67

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
             QE+  +  + +V     +   +                       R + V      + 
Sbjct: 68  CFQEVDRFGDLEEVLKVRGYSGIWKMRTGNAIDGCAVFWRT-----SRFRLVHEESIEFN 122

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--NTYSPSCSLLSQQ 187
             G +D+ ++        L +         L   + +   + ++            L QQ
Sbjct: 123 KHGLRDNVAQICVLEVSCLHILETFSSSLSLLSTISNKVVICNIHVLYNPKRGDIKLGQQ 182

Query: 188 AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDF 224
            + L D      +  +  P ++ GDFN       ++   
Sbjct: 183 VRMLLDRAHAVSKTWNDAPVILCGDFNCTPKVTSSSAFL 221



 Score = 36.8 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/99 (10%), Positives = 26/99 (26%)

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           ++    N    ++ +      T    +               + N      +DY    + 
Sbjct: 270 IVTATGNVDCMFVEHPLKLKSTYTQVEDCYGTRDPNGEPLVTSYNRCFFGTVDYIWYSEG 329

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                +    ++            K  SDH  ++ ++ F
Sbjct: 330 LQTVRVLAPMAKHAMQWTAGFPTKKWGSDHIALASEFAF 368


>gi|73985407|ref|XP_850132.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFNRKINY---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN  ++                   T+D  D    +     +           
Sbjct: 141 --LILGDFNLALSILDRSSKQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|17987602|ref|NP_540236.1| hypothetical protein BMEI1319 [Brucella melitensis bv. 1 str. 16M]
 gi|17983310|gb|AAL52500.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1
           str. 16M]
          Length = 256

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 48  EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 97

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 98  AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 143

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 144 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 186

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 187 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 237

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 238 HLPVLVEFS 246


>gi|34392563|dbj|BAC82611.1| pol-like protein [Danio rerio]
          Length = 1267

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 93/311 (29%), Gaps = 73/311 (23%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
           +L  +F  +  +    + +R+ S N N L              R      LL +  +   
Sbjct: 4   LLVFLFVSLSLSLFYMEILRVGSLNTNGL--------------RDEKKRNLLLESIRIKQ 49

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
            +++FLQE  S +                              ++   +A+         
Sbjct: 50  LNVIFLQETHSNSN----------NEAEWGLCWKGEKVLSHGTNLSAGVAIL---FSSAL 96

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
           +   L+  +    R      V +  +IN      ++++ ++                   
Sbjct: 97  KVQILMINEIELGR-----LVAVRAKINDLSFLFINVYAQNNGAD-------------RL 138

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---------DFWKTIDPNDSLIR 236
           +    L+ ++ Q+++     +I GD+N  +++  + +              I  N     
Sbjct: 139 KLFSNLECFLKQQQD-GDFIIIGGDWNCTLDFKYDRNSEEPHMQSASRLAGILKNQYFSD 197

Query: 237 FPKEKDSRCNANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
             +E+++               +   +D F +  N    ++  +                
Sbjct: 198 VWREQNASIKQYTWVKINDGRFSGARLDRFYVSNNVKNRVVGANIIP------------S 245

Query: 291 RLSDHCPISID 301
            LSDH  I+++
Sbjct: 246 FLSDHKLITVE 256


>gi|326793816|ref|YP_004311636.1| exodeoxyribonuclease III Xth [Marinomonas mediterranea MMB-1]
 gi|326544580|gb|ADZ89800.1| exodeoxyribonuclease III Xth [Marinomonas mediterranea MMB-1]
          Length = 258

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/306 (9%), Positives = 78/306 (25%), Gaps = 76/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ--EMGSYNAVA 81
           ++++S N+N + +      +                +    + D+V LQ  ++   +   
Sbjct: 1   MKVISLNVNGIRQAAERGFF---------------DWMVRQNPDVVCLQDLQVDERSLND 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            VF    +  ++                    +A+  K +     +       D   R  
Sbjct: 46  SVFFPPEYNTYFFDSMEDPEQA---------GVAIYCKAMPKAIMTGMGFPECDFEGRF- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   ++ +   + V           +     +  +        +  K+ + + +  
Sbjct: 96  --------IQADFDNVSVASFLAPHGSNNEEPLQAHKYAF------MEGFKNHLIKTRRK 141

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              F+  G  N   +                         +  + ++ +  + +      
Sbjct: 142 RREFIFCGTANVARSPIDVSSWFVNQRNSGFLPDERKWINEIFNEHEYIDAYRQVNKQDK 201

Query: 246 NANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              +DY +        +                 +G+R SDH P
Sbjct: 202 QYTWWPDYERAWKLNEGGRLDYQITTPGIKNQIQGGGV-----------YKGQRFSDHAP 250

Query: 298 ISIDYD 303
           + ++YD
Sbjct: 251 LIMEYD 256


>gi|207342615|gb|EDZ70331.1| YML118Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 504

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 66/221 (29%), Gaps = 9/221 (4%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +  V+++++N    TL  ++          +      +L    K    D+V LQE+
Sbjct: 102 VTQDSLDVKIMTYNTLAQTLIRRD-FFPESGPALKWHKRSKVLVHELKKYRPDVVSLQEV 160

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                N   + F K  + + +       H    + N+    +            +  ++ 
Sbjct: 161 DYNELNFWQENFHKLGFDMIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVIS 220

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A+          ++      +     ++  +   F     +      S  +     Q ++
Sbjct: 221 ARTRTKNIALIISLYFKGITDSSSRGIIVANTHLFWHPFGVFERLRQSYLV----LQKIQ 276

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +   + K +    ++ GDFN +           + +     
Sbjct: 277 EIKARSKYNGWHSLLMGDFNTEPEEPPYLAITKRPLILKGP 317


>gi|254463331|ref|ZP_05076747.1| endonuclease/exonuclease/phosphatase, putative [Rhodobacterales
           bacterium HTCC2083]
 gi|206679920|gb|EDZ44407.1| endonuclease/exonuclease/phosphatase, putative [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 402

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/390 (11%), Positives = 96/390 (24%), Gaps = 110/390 (28%)

Query: 25  RLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + S+N+  L  +EQE  +    + +        L      LDAD+V  QE+    A+  
Sbjct: 5   TVASFNVKNLIGAEQEYYTFQSYTTEEHAWKAAWLADQIVTLDADVVGFQEIFEEAALRA 64

Query: 83  V----------------------------FPKNTWCIFY-STERLINHSKRDSNNDIHTA 113
           V                            F K  +  +  +      ++   +       
Sbjct: 65  VIREADEIGEESNEDVIPDRSKRYRKKAIFRKLKYAGYRDAALAFAPNANDGAPGQRRPG 124

Query: 114 IAVRKKN------------VRVLQQSYPLLGAKDSFSRA---GNRRAVELLVEINGKKIW 158
           +A+  +                L   +  +G  D         +R  ++  V +  + + 
Sbjct: 125 VAILSRFGFEGTPDIIQDLPEPLDIPFQDMGGGDGGHYRISRLSRPILKARVPMGREVVT 184

Query: 159 VLDIHLKSF--------------------CFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           V + HLKS                               + +      +A  L+  I  +
Sbjct: 185 VFNTHLKSKLGEFVRPEGAEFAPESDLANYDSVGRALGAARAALRRMAEAWVLRREIVAE 244

Query: 199 KESLVPFVIAGDFNRKINYLGN-----------NDDFWKTIDPN---------------- 231
            ++  P ++ GDFN   + + +                +                     
Sbjct: 245 LKAGHPVIVMGDFNDGEHAVSSEIIAGEKPFKNYSWMLRHNAKASNDRYSKDENETIQEA 304

Query: 232 --------DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE- 282
                      +   K        +        ID   + ++              ++  
Sbjct: 305 ISAVRLHSAEKLFVKKSLRDMVYTSAFGGVYESIDQIYLSRHFVPDAGGTLAEMEYFSVL 364

Query: 283 --------DDIKSRGKRLSDHCPISIDYDF 304
                    +     K  SDH  I +   F
Sbjct: 365 NDHLTDGSHEDAPYNKLASDHGQIMVHLAF 394


>gi|73976474|ref|XP_536180.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1274

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 7   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 53  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 102 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 139

Query: 204 PFVIAGDFNRKINY---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN  ++                   T+D  D    +     +           
Sbjct: 140 --LILGDFNLALSILDRSSKQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 197

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 198 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 237


>gi|2981631|dbj|BAA25253.1| unnamed protein product [Canis lupus familiaris]
          Length = 1275

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/292 (11%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN          K N          T+D  D    +     +           
Sbjct: 141 --LILGDFNLALSILDRSSKHNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  Q+      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHQSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|325675514|ref|ZP_08155198.1| transmembrane protein [Rhodococcus equi ATCC 33707]
 gi|325553485|gb|EGD23163.1| transmembrane protein [Rhodococcus equi ATCC 33707]
          Length = 333

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 76/291 (26%), Gaps = 67/291 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A     +R++  NI                   ++D T L Q  ++   D++ LQE+
Sbjct: 93  SVGAPTGPTIRVMQSNI----------------MVGSADPTALVQAVRDQGVDVLTLQEL 136

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +  AVA +       +   T                    +  +      ++   +   
Sbjct: 137 -TEPAVAALRDSGLEDVLPHTFLEPRVGGNGGG--------IYSRLPLSNGRTVEGMALT 187

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +          + + V+    +  VL        F       Y       ++    L+D 
Sbjct: 188 N----------LVVDVDAGLGEPVVL--------FDVHPVPAYIAPAEHWTEDFDRLRDA 229

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-RN 253
           +     S    +++GDFN   ++    D     +     +    +             R 
Sbjct: 230 MDAAAVSDN-VIVSGDFNATYSHRKFRD-----LRHGGYVDAADQLGAGTLPTYPTDKRY 283

Query: 254 KIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID+ +        L +                    SDH  +  + 
Sbjct: 284 PAIVGIDHVLTKGAQATSLERVEV---------------AGSDHYGLIAEL 319


>gi|256788127|ref|ZP_05526558.1| hypothetical protein SlivT_26884 [Streptomyces lividans TK24]
          Length = 350

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 84/315 (26%), Gaps = 83/315 (26%)

Query: 1   MIRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47
           ++RK   AL+  +VP +                   + + + N+N  +     +    + 
Sbjct: 95  LVRKSATALIALVVPVSVWLNLFGGLLFDKTGSGGDLTVATHNVNADNADPAGTARAVAA 154

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                                  L+E+       K     T+    + +   +       
Sbjct: 155 AGADVM----------------ALEEL-------KASAVPTYEKALAAKYPHHAVVGTVG 191

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                           L   YP+ G K      G +RA+   V      I V   HL S 
Sbjct: 192 ----------------LWSKYPISGVKPVDIELGWKRAMRATVTTPSGPIAVYVAHLPSV 235

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                   T         + A  L + I+ +K      ++ GD N  +N         ++
Sbjct: 236 RVKLEAGFT----ARQRDKSADALGEAISHEKLPRK--ILLGDLNGTMND--------RS 281

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           +    S +R P+                   ID  ++                      +
Sbjct: 282 LTAITSQLRSPQGAVGDGFGFSWPASFPMARIDQILVTG------------VEPMTSWTL 329

Query: 286 KSRGKRLSDHCPISI 300
            + G   SDH PI+ 
Sbjct: 330 PATG---SDHLPIAA 341


>gi|73981669|ref|XP_856017.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform
           4 [Canis familiaris]
          Length = 1252

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFNRKINY---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN  ++                   T+D  D    +     +           
Sbjct: 141 --LILGDFNLALSILDRSSKQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|73973846|ref|XP_854069.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFNRKINY---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN  ++                   T++  D    +     +           
Sbjct: 141 --LILGDFNLALSILDRSSKQNISKETRALNDTLEQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|322497972|emb|CBZ33047.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 447

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 87/335 (25%), Gaps = 88/335 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----MGSYNAV 80
           + ++WN+  L                  + + LR + +    D++ LQE    +   +A 
Sbjct: 131 KFITWNVAGLRGL------------LKKNASALRAFMEAEKPDVLCLQETKLNVDEADAN 178

Query: 81  AKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           A +   + +            +S   +     T +   K+      + + L     + + 
Sbjct: 179 ATLGVVDGYSFVDHPCAFKRGYSGTRTYMKNSTTV---KRLHARCTRGFALPSEPQAGAA 235

Query: 140 AGNRRAVELLVEINGKKIWVL------------------DIHLKSFCFLDSLENTYSPSC 181
           AG+   VE   +  G+ +                          S   L  L        
Sbjct: 236 AGSPVLVEGAGDEEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFD 295

Query: 182 SLLSQQAQWLKDWITQKK-----------ESLVPFVIAGDFNRKINYLGNNDD------- 223
             + +  Q L  W T+              S   F+ AGD N                  
Sbjct: 296 PSMREYLQRLDTWATENAGVPSAAAKGGDSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQ 355

Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                       F +T+   +S+  F +              +           +DYFV+
Sbjct: 356 ECSGFAPEERISFRETMQRTNSVDVFRQLYPHAGPVYSFWSQRINGRPRNLGWRLDYFVV 415

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            Y  D         SDHCP
Sbjct: 416 SSRLAS-----------YVVDCFPMPTVMGSDHCP 439


>gi|119385250|ref|YP_916306.1| hypothetical protein Pden_2523 [Paracoccus denitrificans PD1222]
 gi|119375017|gb|ABL70610.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
          Length = 350

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/341 (8%), Positives = 80/341 (23%), Gaps = 72/341 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75
           A  +R+ ++  +    ++G  L    + R  +      +       DI+ L +       
Sbjct: 21  ADPLRIATY--SPDLSRDGPGLLLRDLGRKDAQIEAAIRVVAETRPDILLLTKFDWDYEG 78

Query: 76  ---SYNAVAKVFPKNTWCIFYSTERLINH-----------------SKRDSNNDIHTAIA 115
                 A         +   ++                        ++          +A
Sbjct: 79  RALDAFAARLAEAGLDYPHRFAARPNSGMATGLDLNADGRLGTADDAQGFGTFSGQGGMA 138

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL--------------LVEINGKKIWVLD 161
           +  ++       +     +D           ++              ++ +  + + +L 
Sbjct: 139 ILSRHPIGPVTDHTDFLWRDLPGHLMPPLPEDVVAIRRLSSTAHWDAVITVADRPLHLLG 198

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           +      F    +     +   L+     L            PFV+AG+ N         
Sbjct: 199 MSATPPVFDGPEDLNGRRNHDELAFWLHHL---------PDGPFVLAGNLNLDPMDSEGR 249

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI------------------PIDYFVMD 263
            +    I  + +         +      N  +K                    +DY +  
Sbjct: 250 PEALARIMAHVTDPLPRSPGGAAARGGVNDGHKGDPALDTGDWPDDKPPGNLRVDYVLPA 309

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +          +       +   +       H  + +D D+
Sbjct: 310 KGLKVLGSGVLWPADGPLAEAALAASA----HRLVWVDLDW 346


>gi|39933440|ref|NP_945716.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodopseudomonas palustris CGA009]
 gi|39647286|emb|CAE25807.1| Endonuclease/Exonuclease/phosphatase family [Rhodopseudomonas
           palustris CGA009]
          Length = 375

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 74/298 (24%), Gaps = 37/298 (12%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKVF 84
           L +WNI      +          R       + +       D+V +QE+     A+ +V 
Sbjct: 41  LATWNIREFGGTKY-------RGRIPDALYCIAECISRF--DLVAVQEVRQDLVALKQVV 91

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   Y    +      +           R +   +  +      +         R 
Sbjct: 92  RILGRDWDYIYNDVSLADGGNGERLAFLFNRSRVRFTGLAGELVLPSKSASKLVAQIART 151

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE---S 201
                 +    K  +  +H+                       A   K +I        S
Sbjct: 152 PFICGFQSGWAKFNLCTVHIYYGEGKKDDPKRIEEIEKTAKLLADKAKSYINLDDPVDYS 211

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF- 260
               V+ GDFN      G  D  ++ +  N  +I  P  +    N +++       D   
Sbjct: 212 PENLVLLGDFNIF----GREDATFQALTKNRFVIPEPLLRQKGSNVSEDKFY----DQIA 263

Query: 261 VMDQNAYKFLIQESF---------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +                            +  +      R  ++SDH  +  +++
Sbjct: 264 FFKETRGIECSNAGVFNFYQYAFNDPKLYKGVMPASAAFNTWRTFQMSDHLIMWTEFN 321


>gi|119193474|ref|XP_001247343.1| hypothetical protein CIMG_01114 [Coccidioides immitis RS]
          Length = 522

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/347 (11%), Positives = 68/347 (19%), Gaps = 84/347 (24%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           NI TL+      + K   +R       L         +IV LQE  +      +  +   
Sbjct: 15  NILTLNCWGLKFISKYRRERLLEIGKRLASL--EAPPEIVGLQECWTQQDYNNIRKETRH 72

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144
            + Y                    +A+  K        +         A         + 
Sbjct: 73  ILPYGKFYFSGIFGG--------GLAILSKWPIEESSMFGYPLNGRPTAFFRGDWFVGKG 124

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + I      +  +           E   S  C   + QA  +   +    E    
Sbjct: 125 VACARIRIGPGPSDIAAVFCTHLHAPYEREPHDSYIC-HRTAQAWEMAKLMRGAAEKGHL 183

Query: 205 FVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKE---------------- 240
            +  GDFN     L +          D W+ + P+ SL                      
Sbjct: 184 VIGLGDFNMLPLSLAHRLITTHAPVQDVWRYLHPDSSLGAAIDAVEMARKRPVPSAEYNL 243

Query: 241 -----KDSRCNANKNLRNKI----------------------PIDYFVMDQNAYKFLIQE 273
                                                      +DY  +           
Sbjct: 244 SENGVTCDGLFNTWRWNKGQQKRLEKEGHIEVDGRLPDPLGKRLDYIFVGNGGPTLQPSS 303

Query: 274 SFSEILYN-----------------EDDIKSRGKRLSDHCPISIDYD 303
           S                         +   +    LSDH  +     
Sbjct: 304 SSPTQSSVQQPSDWKWTIESARVSMTERHPTLHCSLSDHFAVEAVIS 350


>gi|77164879|ref|YP_343404.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|76883193|gb|ABA57874.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
          Length = 355

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 70/254 (27%), Gaps = 49/254 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            +        +  DAD+V + E        +V        +   + L N           
Sbjct: 113 RNVQRFLAIVREADADVVLMLE-PDQWWEEQVRELEVKYAYTVKKPLDN----------R 161

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K   V  +   LL           +         +G+ + +  +H +     +
Sbjct: 162 YGMLLYSKFELVAPEIKFLLKEGIPSIHTEVKLP-------SGQLVRMHCLHPEPPSPTE 214

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           +  +    +          L     + K S  P ++AGD N              T+   
Sbjct: 215 ADTSVNRDA---------ELLIVGREVKNSEQPVIVAGDLNDVAWSYT------TTLFQK 259

Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            S +  P+      N+   K+   + P+D+    ++     I                  
Sbjct: 260 TSGLLDPRIGRGMFNSYNAKHPLMRWPLDHLFHSEDFLLVRIA--------------RMP 305

Query: 290 KRLSDHCPISIDYD 303
              SDH PI I   
Sbjct: 306 AFGSDHFPIYIKLS 319


>gi|289744619|ref|ZP_06503997.1| hypothetical exported protein [Mycobacterium tuberculosis 02_1987]
 gi|289756974|ref|ZP_06516352.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289685147|gb|EFD52635.1| hypothetical exported protein [Mycobacterium tuberculosis 02_1987]
 gi|289712538|gb|EFD76550.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
          Length = 374

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 88/297 (29%), Gaps = 31/297 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           VF     T +++    ++++NI  L      ++           +   ++  K L+A  V
Sbjct: 95  VFVGNTPTDTISGDFSMLTYNIAGLPFPLSSAILP--------RFFYTKEIGKRLNAYYV 146

Query: 70  F-LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             +QE   +     +  K+        E                      K  R+ +Q++
Sbjct: 147 ANVQE--DFAYHQFLIKKSKMPSQTPPEPPTLLWPIGVPFSDGLNTLSEFKVQRLDRQTW 204

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               + +  +  G       +    G  + V ++H  +     +  N             
Sbjct: 205 YECTSDNCLTLKG--FTYSQMRLPGGDTVDVYNLHTNTGGGPTTNAN------------L 250

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             + ++I Q   +    ++ GDFN + +   +    +  ++         +   +     
Sbjct: 251 AQVANYIQQN-SAGRAVIVTGDFNARYSDDQSALLQFAQVNGLTDAWVQVEHGPTTPPFA 309

Query: 249 KNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      +D           L   S+           S+G+ LSDH P  + +
Sbjct: 310 PTCMVGNECELLDKIFYRSGQGVTLQAVSYGNEAPK--FFNSKGEPLSDHSPAVVGF 364


>gi|91090171|ref|XP_972767.1| PREDICTED: similar to Ocrl protein [Tribolium castaneum]
          Length = 679

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 85/314 (27%), Gaps = 56/314 (17%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEM 74
           +  Q+    + +WN+N       +  W +                     D+  + LQE+
Sbjct: 40  TQQQEFSIFVGTWNVNGQPPSVSLRPWLS---------------FDEEPPDLYAIGLQEI 84

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP----- 129
              +  A +F        +    +     +     +     V  + + ++   +      
Sbjct: 85  -DLSKEAFLFNDTPREAEWVKYVMDGVHSKAKYKSVAVTRLVGMQLIVLVNSKHYQFVKN 143

Query: 130 ---LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                       + GN+  V + +E++   +  ++ HL +        N      +    
Sbjct: 144 VAVDTVGTGLLGKMGNKGGVAVRLELHNTSLCFVNCHLAAHIEEFERRNQDYKDINARIN 203

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTID 229
             +       Q  +        GD N +I  L                    D   +  D
Sbjct: 204 FRKQ-----PQSIKDHEQVYWLGDLNYRITDLNTQQVKTLLARNEIVTLLKADQLNQQKD 258

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF---SEILYNEDDIK 286
               L+ + +   +     K   N    D     + A      +      E +Y      
Sbjct: 259 RGHVLLDYTEGDITFHPTYKYDLNTDTFD---TSEKARPPAWTDRILWRGEGIYQTAYRS 315

Query: 287 SRGKRLSDHCPISI 300
               R+SDH P+S 
Sbjct: 316 HMDVRISDHKPVSA 329


>gi|73981667|ref|XP_855978.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform
           3 [Canis familiaris]
          Length = 1240

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFNRKINY---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN  ++                   T+D  D    +     +           
Sbjct: 141 --LILGDFNLALSILDRSSKQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|163842897|ref|YP_001627301.1| hypothetical protein BSUIS_A0652 [Brucella suis ATCC 23445]
 gi|261221829|ref|ZP_05936110.1| endonuclease/exonuclease/phosphatase [Brucella ceti B1/94]
 gi|265997794|ref|ZP_06110351.1| endonuclease/exonuclease/phosphatase [Brucella ceti M490/95/1]
 gi|163673620|gb|ABY37731.1| Hypothetical protein BSUIS_A0652 [Brucella suis ATCC 23445]
 gi|260920413|gb|EEX87066.1| endonuclease/exonuclease/phosphatase [Brucella ceti B1/94]
 gi|262552262|gb|EEZ08252.1| endonuclease/exonuclease/phosphatase [Brucella ceti M490/95/1]
          Length = 358

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 150 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 199

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 200 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 246 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 288

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 289 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 339

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 340 HLPVLVEFS 348


>gi|321249742|ref|XP_003191557.1| phospholipase C [Cryptococcus gattii WM276]
 gi|317458024|gb|ADV19770.1| phospholipase C, putative [Cryptococcus gattii WM276]
          Length = 529

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 68/281 (24%), Gaps = 50/281 (17%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           VS+ +   S         +  +RT      + +Y  +   DIV LQE+  Y     V  +
Sbjct: 10  VSYRLRCESVYPRGLAIVSKDRRT--RIQAIAEYMASSSYDIVCLQELWIYKDYEVVREE 67

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
               + +S                 + +A+  +   +   + P   +            V
Sbjct: 68  VQGNLPFSRFFHTGALG--------SGLAIFTRFPLIAAHALPYSLSGSPAQAFAGDFFV 119

Query: 147 ------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                  +++     ++ + + H+ +               +    Q+  L + +     
Sbjct: 120 KKAAGNVVILHPVLGEVEIWNTHMHAAGEHPPDTRQ-----AHRIAQSWQLANAVRGGAA 174

Query: 201 SLVPFVIAGDFNRKINY-----------------------------LGNNDDFWKTIDPN 231
                 + GDFN +                                  +  +  K     
Sbjct: 175 KGRYVFVMGDFNSQPWSIPIAMMRDHAHLTDSFAQVHLSANSEISPPPSPAEALKVYGMT 234

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                           N   R    +DY    Q A      
Sbjct: 235 CDSPLNTYSAGKPIPENVLERGGKRLDYIFFRQPAVARRRP 275


>gi|261751955|ref|ZP_05995664.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513]
 gi|261741708|gb|EEY29634.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513]
          Length = 357

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 149 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 198

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 199 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 244

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 245 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 287

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 288 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 338

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 339 HLPVLVEFS 347


>gi|221101936|ref|XP_002168483.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata]
          Length = 1161

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 76/290 (26%), Gaps = 77/290 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V ++++N+N L++                    +    KN+D DI  +QE    N   + 
Sbjct: 3   VTILTFNVNGLNDD--------------RKRHNIMNTFKNMDCDIFCIQETHCVNEKTEK 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           + K          +    +  ++       +A+  K     Q        +         
Sbjct: 49  WTKE------WNLKTGGSALWNNGEARQRGVAILTKIETKFQNVSTDNYGR--------- 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   + +  K I  ++++  +                   QQ +     + +      
Sbjct: 94  -VIAANITLKNKIIRTINVYGPNDP-----------------QQKENFFGQLGKHIYQSD 135

Query: 204 PFVIAGDFN-------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
              ++GDFN                         +K       L    +  +    A   
Sbjct: 136 ILFLSGDFNMVENPVLDREGGDVYNKNNTLGKTNFKKFTDKYELQDVFRAINPLTKAYTF 195

Query: 251 LR----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            +     +  ID   + +N    L  +                 +LSDH 
Sbjct: 196 EKSDKTYRCRIDRIYVSKNNELPLKSKML-------------DPKLSDHR 232


>gi|119192056|ref|XP_001246634.1| hypothetical protein CIMG_00405 [Coccidioides immitis RS]
          Length = 551

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 60/223 (26%), Gaps = 29/223 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
             RL +WN+N +        W+ +           +     L+ADI+ LQE  +   +  
Sbjct: 2   TFRLTTWNVNGIRNPFSYEPWRGT--------QSFQGMFDLLEADIIVLQELKIQRKDLR 53

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--------------VRVLQQ 126
             +     W  F+S   L  + K  S   I+T  A                        +
Sbjct: 54  DDMVLVPGWDCFFS---LPKYKKGYSGVAIYTRNATCSPIYAEEGVTGILCPPNSTSSYR 110

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LL 184
             P       +         EL  E    +   + +   +F  L                
Sbjct: 111 ELPESEQIGGYPTDEQLSTSELSAETLDSEGRCVILEFPAFVLLGVYCPANRDETRDGFR 170

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                 L   I          V+AGD N   + + +     + 
Sbjct: 171 LGFLNALDHRIRNLISLGKRVVVAGDLNISRDEIDSAHALEQI 213


>gi|159185117|ref|NP_355197.2| hypothetical protein Atu2240 [Agrobacterium tumefaciens str. C58]
 gi|159140388|gb|AAK87982.2| hypothetical protein Atu2240 [Agrobacterium tumefaciens str. C58]
          Length = 310

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 79/297 (26%), Gaps = 77/297 (25%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F      A  A+  RL+S+N+   +     ++                       AD V+
Sbjct: 82  FSTAATAAPGARPFRLLSFNVLMDNAANADAIADK---------------ILEAGADAVY 126

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           L E     A+  V P+      +                    + +  K   +  + + L
Sbjct: 127 LFEA---AALQSVLPRLQQTYPHRLGCYEGTPG--------CDLVILSKRPLLEGRFHSL 175

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              +        R A+   V+++G ++ +   H+    F D                   
Sbjct: 176 SDLRRD------RFAI-AHVDLDGTELTLAAGHITKPYFDDYHR--------------DE 214

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L +          P ++ GDFN          D    +  ND      +         + 
Sbjct: 215 LDEVSEILFRVTGPLILGGDFN----SASIAPDMRAFLAANDLKKATFEPA---TWPTEA 267

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD-----HCPISIDY 302
            R  I ID+                      E     +  RLSD     H  +  D+
Sbjct: 268 GRFGIAIDHIFAR------------------EPATLMKTTRLSDSLGSNHFGLMADF 306


>gi|213691303|ref|YP_002321889.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213522764|gb|ACJ51511.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457370|dbj|BAJ67991.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 369

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/292 (8%), Positives = 70/292 (23%), Gaps = 67/292 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            +++ +  +++ N                     +D   + +  +  +  ++ LQE+   
Sbjct: 137 ETLSPQFSVMTMNCRY----------------GRADAAEIIRNIRERNISVLALQEVTDD 180

Query: 78  NAVA----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                    +     +  F   +   N       +    + AV    V +     P +  
Sbjct: 181 LITRLTEADINELLPYHQFGDAKETDNGGFNVIYSRYEPSAAV-PNVVSIPAADVPAITL 239

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           K                    + + +   H KS     +  +        L++       
Sbjct: 240 K----------------TSGNRTVTLCSAHPKSPMRGCADWSAGILGLRELAR------- 276

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              +   +    V+ GD N   ++       ++ +  +        +             
Sbjct: 277 --AKSVSNRNIVVVMGDLNSSTDHPS-----FRALLKSGFKDASLTQAAGPNLTFPRWLK 329

Query: 254 KIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              I  D+ +  Q               +   D         DH  ++    
Sbjct: 330 WPRIELDHILFAQGLRPS------GVTSFEVPDT--------DHLALAATLT 367


>gi|226496623|ref|NP_001141416.1| hypothetical protein LOC100273526 [Zea mays]
 gi|194689736|gb|ACF78952.1| unknown [Zea mays]
 gi|194700416|gb|ACF84292.1| unknown [Zea mays]
 gi|194704520|gb|ACF86344.1| unknown [Zea mays]
          Length = 538

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 59/225 (26%), Gaps = 9/225 (4%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSV--KRTTSDYTLLRQYAKNLDADIVFLQ 72
               A +  ++S+NI  + L+++      K S            L         DI+ LQ
Sbjct: 186 PPHQAGRFIILSYNILADYLAQEHRFLYEKISPFILDWNWRKDKLLFEFGLWSPDILCLQ 245

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLL 131
           E+  +  + +      +   +                     +   +            +
Sbjct: 246 EVDKFTDLEQEMASQGYNGTWKIRTGDAADGCAIFWRTTRFQLRYEEDIEFTKLGLRDNV 305

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                    G +      V ++              C +  L N       L   Q + L
Sbjct: 306 AQLCVLESVGLQYVQTDSVSLSTSSNHPQQAKQVIICNIHVLYNPKRGDIKL--GQVRTL 363

Query: 192 KDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
            D      +  +  P ++ GDFN        N    + ++ +   
Sbjct: 364 LDKANALSKMWNDAPVIVCGDFNSTPKSPLYNFMLGQKLNLSGLA 408



 Score = 44.9 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/81 (11%), Positives = 23/81 (28%)

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                   +               + N +    +DY    +  +   + ++F   +  + 
Sbjct: 456 LRSVYTDVEDFEGTKDASKEPLVTSYNRKFMGTVDYIWASEGLHTVKVLDTFPIEILKKT 515

Query: 284 DIKSRGKRLSDHCPISIDYDF 304
                 K  SDH  ++ +  F
Sbjct: 516 TGFPTKKWGSDHIALACELAF 536


>gi|50305037|ref|XP_452476.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641609|emb|CAH01327.1| KLLA0C06248p [Kluyveromyces lactis]
          Length = 516

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/238 (8%), Positives = 63/238 (26%), Gaps = 13/238 (5%)

Query: 23  KVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            + ++++N +     +  +     +  +      +L    K  + D++ LQE+ +    +
Sbjct: 116 PISIMTYNCLAQALIRRTLFPTSGNAVKWFKRSQVLLNEFKYYNVDVLCLQEIDTVQYKS 175

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               + T   +                     +      + +          +   +   
Sbjct: 176 FWKMEFTKLGYMCQFHFNPTKNHGVLIAWKEDLFDMTDKMLIDYDKETTGAIEPRTTTKN 235

Query: 142 NRRAVELLVEI------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
               + L  +          K+  + I      +        +  C ++ ++ +  ++ I
Sbjct: 236 VGMLLSLKFKKKVLEKYPDTKVSGIIIGTTHLFWHPFGTYERTRQCYIVLKKVKEFQNRI 295

Query: 196 TQKKESLV------PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              +          P    GDFN +           K ++         +   S   +
Sbjct: 296 NVLQNEKDGDNSHWPAFFCGDFNSQPFDAPYLSITSKPVEYTGRAKTVIECSTSFTFS 353


>gi|73973987|ref|XP_539078.2| PREDICTED: similar to Sphingomyelin phosphodiesterase 2 (Neutral
           sphingomyelinase) (nSMase) (N-SMase) (Lyso-platelet
           activating factor-phospholipase C) (Lyso-PAF-PLC) [Canis
           familiaris]
          Length = 356

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 53/212 (25%), Gaps = 29/212 (13%)

Query: 110 IHTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164
           I + + V  K+       +                   +    L++ ++G  +     HL
Sbjct: 11  IGSGLCVFSKHPIQEFTQHVYTLNGYPYMIHHGDWFCGKAVGLLVLHLSGLVLNAYVTHL 70

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
            +               +    QA  L  +I    +     ++ GD N     LG     
Sbjct: 71  HA-----EYNRQKDVYLTHRVAQAWELAQFIHHTSKKADVVLLCGDLNLHPKDLGCR--L 123

Query: 225 WKTIDPNDSLIRFPKEKDS----------RCNANK----NLRNKIPIDYFVMDQNAYKFL 270
            K            ++              C  ++         I IDY +  +    F 
Sbjct: 124 LKECTGLHDAYHETRDFKGSEEGCTMVPENCYVSQRELEPFPFGIRIDYVLY-KAVSGFY 182

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           I      +          G  LSDH  +    
Sbjct: 183 ISC--KTLRTTTGHDPHSGTPLSDHEALMATL 212


>gi|302921381|ref|XP_003053274.1| hypothetical protein NECHADRAFT_35874 [Nectria haematococca mpVI
           77-13-4]
 gi|256734214|gb|EEU47561.1| hypothetical protein NECHADRAFT_35874 [Nectria haematococca mpVI
           77-13-4]
          Length = 314

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 46/295 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYNAV 80
           K+R+V+WN++  +              T S    +  +        DI+F QE+     +
Sbjct: 51  KLRIVTWNVDAGAHF------------TESRLEAIVSHILCQKPVADIIFFQEVSRPALL 98

Query: 81  AKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +        ++STE    N         +  + A    + + +  S      +  F  
Sbjct: 99  HLLKDTRIRDSWFSTEADTTNWGGHIFATMMLVSKARFGPSNKSMSVSALGPVWRVKFPS 158

Query: 140 AGNRRAVELLVEING--------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              R A+   + ++          ++ ++++HL      DSL    S     LS  A+ L
Sbjct: 159 RFGRDALCSDIFVSSPTDNSSQISRLRLINVHL------DSLALERSRRPEQLSIAAEML 212

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           ++            +IAGDFN  +        +   +D    +           +  +  
Sbjct: 213 RE--------TGKGLIAGDFNPVLPEDNTLVAYNGLVDAWTKVHDSEPGFTWGVDGKQAF 264

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPISIDYD 303
                +D       A   L       +     + +  G      SDH  +   ++
Sbjct: 265 -PPGRLDKI-----AILGLQPHEIEVMHPGVIEKEEFGVGQVPWSDHSGLRCTFE 313


>gi|254434461|ref|ZP_05047969.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
 gi|207090794|gb|EDZ68065.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
          Length = 353

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 70/254 (27%), Gaps = 49/254 (19%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            +        +  DAD+V + E        +V        +   + L N           
Sbjct: 111 RNVQRFLAIVREADADVVLMLE-PDQWWEEQVRELEVKYAYTVKKPLDN----------R 159

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K   V  +   LL           +         +G+ + +  +H +     +
Sbjct: 160 YGMLLYSKFELVAPEIKFLLKEGIPSIHTEVKLP-------SGQLVRMHCLHPEPPSPTE 212

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           +  +    +          L     + K S  P ++AGD N              T+   
Sbjct: 213 ADTSVNRDA---------ELLIVGREVKNSEQPVIVAGDLNDVAWSYT------TTLFQK 257

Query: 232 DSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            S +  P+      N+   K+   + P+D+    ++     I                  
Sbjct: 258 TSGLLDPRIGRGMFNSYNAKHPLMRWPLDHLFHSEDFLLVRIA--------------RMP 303

Query: 290 KRLSDHCPISIDYD 303
              SDH PI I   
Sbjct: 304 AFGSDHFPIYIKLS 317


>gi|330801444|ref|XP_003288737.1| inositol 5-phosphatase 4 [Dictyostelium purpureum]
 gi|325081213|gb|EGC34737.1| inositol 5-phosphatase 4 [Dictyostelium purpureum]
          Length = 775

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 88/323 (27%), Gaps = 62/323 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQE 73
            T   A  + L +WN+N     E + LW      T             L  D+  +  QE
Sbjct: 129 FTEKKAMTIFLGTWNVNGKKPTEPLDLWLKDPSMT-------------LQPDVYAIGFQE 175

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQS 127
           +    A A +    T  + +    L                 I   + VRK++ + +   
Sbjct: 176 L-DLTAEALLLGDTTRSLPWEQHILSTLGGDYVKLLSKQLVGILLCVYVRKEHRQHIAHV 234

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
              + A       GN+  V +        I +++ HL +           +     +++ 
Sbjct: 235 QSDIAAVGIMGMMGNKGGVAIRFSFYNTTICIINSHLNAHM---ENVLRRNQDMKDIAKN 291

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPN 231
            +++ +               GD N +I                      D   + +   
Sbjct: 292 IKFVAEEGPINIFDHDQLFWIGDLNYRIPLPDYEVKEKIKKRDFYNLFLVDQLNQQMKAG 351

Query: 232 DSLIRFPKEKDSRCNANKN------------LRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                F +   S     K              R     D  +           E+   + 
Sbjct: 352 AVFEGFQEPPISFAPTYKYDAGTEEYDSSEKRRTPAWCDRILW----KTSKKAENVGILS 407

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
           Y   ++ S     SDH P+S  +
Sbjct: 408 YKRHELLS-----SDHRPVSASF 425


>gi|296139219|ref|YP_003646462.1| endonuclease/exonuclease/phosphatase [Tsukamurella paurometabola
           DSM 20162]
 gi|296027353|gb|ADG78123.1| Endonuclease/exonuclease/phosphatase [Tsukamurella paurometabola
           DSM 20162]
          Length = 312

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/284 (9%), Positives = 61/284 (21%), Gaps = 65/284 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
               + + + + N+   +                 D   L +  ++   D++ + E    
Sbjct: 90  PPAGRTLTVATSNLQVGAG----------------DVEALAKLVRDNRVDVLAVTE---- 129

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                + P     I  ST             ++     +  +       S P        
Sbjct: 130 -----LTPAAAQRIKESTISADLPYGFVRPVEMADGTGLYSRYPVASAASIP-------- 176

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                   +  +  + G+   V    L     L S             +Q + L   +  
Sbjct: 177 --GFTLEGITAVATVPGRG-DVQLFALHPVPPLQSETWERE------LRQIETLLQGV-- 225

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP- 256
              +  P +  GD+N   ++                                     +  
Sbjct: 226 --PAGRPVIALGDYNATYDHAQFRRLLSGGYQDAG---ILAGAGWLPTYPTDKAYPPMVG 280

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ID+ ++       +                       DH  +  
Sbjct: 281 IDHVLVRGLGATDVTAHDIPGA---------------DHRAVLA 309


>gi|289772017|ref|ZP_06531395.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289702216|gb|EFD69645.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 344

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 84/315 (26%), Gaps = 83/315 (26%)

Query: 1   MIRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47
           ++RK   AL+  +VP +                   + + + N+N  +     +    + 
Sbjct: 89  LVRKSATALIALVVPVSVWLNLFGGLLFDKTGSGGDLTVATHNVNADNADPAGTARAVAA 148

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                                  L+E+       K     T+    + +   +       
Sbjct: 149 AGADVM----------------ALEEL-------KASAVPTYEKALAAKYPHHAVVGTVG 185

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                           L   YP+ G K      G +RA+   V      I V   HL S 
Sbjct: 186 ----------------LWSKYPISGVKPVDIELGWKRAMRATVTTPSGPIAVYVAHLPSV 229

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                   T         + A  L + I+ +K      ++ GD N  +N         ++
Sbjct: 230 RVKLEAGFT----ARQRDKSADALGEAISHEKLPRK--ILLGDLNGTMND--------RS 275

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           +    S +R P+                   ID  ++                      +
Sbjct: 276 LTAITSQLRSPQGAVGDGFGFSWPASFPMARIDQILVTG------------VEPMTSWTL 323

Query: 286 KSRGKRLSDHCPISI 300
            + G   SDH PI+ 
Sbjct: 324 PATG---SDHLPIAA 335


>gi|225627129|ref|ZP_03785167.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|225617964|gb|EEH15008.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
          Length = 358

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 150 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 199

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 200 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 246 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 288

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 289 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 339

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 340 HLPVLVEFS 348


>gi|94957778|gb|ABF47139.1| inositol phosphorylsphingolipid-phospholipase C [Cryptococcus
           neoformans var. neoformans]
          Length = 529

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 65/257 (25%), Gaps = 48/257 (18%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +    +  Y  +   DIV LQE+  Y     V       + +S                
Sbjct: 32  RTRIHAIADYLASSSYDIVCLQELWIYKDYEVVREAVQRNLPFSRFFHTGALG------- 84

Query: 111 HTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHL 164
            + +A+  +   +   + P           +      + A  +++      ++ + + H+
Sbjct: 85  -SGLAIFTRFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAANVVILHPVLGEVEIWNTHM 143

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--D 222
            +               +    Q+  L + +           + GDFN +   +      
Sbjct: 144 HAAGEHPPDTRQ-----AHRIAQSWELANAVRGGAAKGRYVFVMGDFNSQPWSIPIAMMR 198

Query: 223 DFWKTIDPNDSLIRFPKEK------------------DSRCNANKNLRN---------KI 255
           D  + +D    +      +                  DS  N     +            
Sbjct: 199 DHAQLMDSFGQVHPSTNSEISPPPSPAEALRVYGMTCDSPLNTYSAGKPIPEHVLEKGGK 258

Query: 256 PIDYFVMDQNAYKFLIQ 272
            +DY    Q A      
Sbjct: 259 RLDYIFFRQPAIARRRP 275


>gi|147782259|emb|CAN76301.1| hypothetical protein VITISV_004811 [Vitis vinifera]
          Length = 1044

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/272 (10%), Positives = 66/272 (24%), Gaps = 53/272 (19%)

Query: 40  VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
                    R      +++   ++   D+  LQE        ++        +       
Sbjct: 741 AKKKGPMKGRGNQKRKIIKSVIRSQKVDLFCLQETKVQVMSDEMVRSLGTGRYLDW---- 796

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIW 158
              K  +       + +      +                   + ++       G   IW
Sbjct: 797 ---KVLNAKGTAGGVIICWDKRSLE-----------ILGVEEGQFSISCRFRNEGDGAIW 842

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           V       F                L ++   ++           P+ + GDFN  +   
Sbjct: 843 VFTGVYGPFS---------REDREGLWEELGAIRGLWE------EPWCLGGDFNITLYID 887

Query: 219 GNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
             N           F + ID    +    +      +   N + +  +D F+        
Sbjct: 888 DRNRTXRITSAMRRFAQIIDELGLVDIPLQGGSFTWSGGLNNQTRARLDRFLATP----- 942

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     ++    +   +  SDH PI ++
Sbjct: 943 -----CWLDQFSRVLNRRLPRPTSDHYPILLE 969


>gi|238785891|ref|ZP_04629858.1| hypothetical protein yberc0001_19110 [Yersinia bercovieri ATCC
           43970]
 gi|238713212|gb|EEQ05257.1| hypothetical protein yberc0001_19110 [Yersinia bercovieri ATCC
           43970]
          Length = 316

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 98/332 (29%), Gaps = 56/332 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58
           M R + +    F +   A+       +L SWN+       G +    +          + 
Sbjct: 1   MRRLFKVCAYSFSLQFLAAHGDVTDYKLASWNMQGAQSGYGSNSKWVTG---------VA 51

Query: 59  QYAKNLDADIVFLQE--------------MGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104
                 + DIV LQE               G +  + +  P+       ++    + +K 
Sbjct: 52  GMLNINEIDIVALQETGAAPPSAIVLPISAGQHPEIVRRIPRANVKSLITSLAGGSTTKI 111

Query: 105 DSNNDIHTAIAVRKKNVRV----LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160
           +  +       V++  + +      + + +    +  + A +R  + L+  +   ++ ++
Sbjct: 112 NPGSGGVNPNMVKEFILNLGSSTRPRDFYIYQFDNGRTDAASRINLALVSRVRADEVLII 171

Query: 161 -------DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-------QKKESLVPFV 206
                  +        +         + +  + +A  +  +I        Q       +V
Sbjct: 172 PPMAIGDNTRPTLGIRIGDDYFFTIHARAARNNEAPQIIQFIDNYMTSTVQPNRPAATWV 231

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GD+NR        +   K + P                     ++   IDY V+    
Sbjct: 232 VMGDYNR---SSDELEASLKQLKPQ-----LTHPYQIASPNRATHQSNGTIDYAVIG--- 280

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
              L Q      +     I +     SDH  +
Sbjct: 281 --RLNQGGAVGGMMTVPLIAALLTYASDHMAV 310


>gi|126282271|ref|XP_001367467.1| PREDICTED: similar to KIAA0759 protein [Monodelphis domestica]
          Length = 671

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  ++S+NI      +  S         +      ++ L Q  ++ D DI+ LQE+   +
Sbjct: 245 QFTVMSYNILAQDLVQQSSELYLHCHPDILNWNYRFSNLVQEFQHWDPDILCLQEVQEDH 304

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 305 YWEQLEPTLRMMGFTCFYKRRTGCKTDGCAVCYKHTRFRLLCASPVEYFRPGLELLNRDN 364

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +I    + V + H+        ++            +   L D 
Sbjct: 365 VGLVLLLQPLVPESLGQITVGPLCVANTHVLYNPRRGDVKLAQVAILLAEVDKVARLAD- 423

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 424 -----GSYCPIILCGDLNSVPDSPLYN 445


>gi|2072951|gb|AAC51263.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 54.9 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLANWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|5052951|gb|AAD38785.1|AF149422_2 unknown [Homo sapiens]
          Length = 1275

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSELQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|297478849|ref|XP_002690411.1| PREDICTED: synaptojanin 2-like [Bos taurus]
 gi|296483874|gb|DAA25989.1| synaptojanin 2-like [Bos taurus]
          Length = 1781

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 85/334 (25%), Gaps = 65/334 (19%)

Query: 26   LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--VFLQEMGSYN 78
            + +WN+N   +     L    +     D   L +     D     ADI  V  +EM   +
Sbjct: 828  VGTWNVNGGKQFRSNLLGTAELADWLLDAPSLCRVTGPPDDGGSPADIFAVGFEEMVELS 887

Query: 79   AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPL 130
            A   V    T    +  +     S+      + +A        I VR  ++  ++     
Sbjct: 888  AGNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPHHIPFIRDVAMD 947

Query: 131  LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                    +AGN+ AV +  + +      +  HL +        N      +      Q 
Sbjct: 948  TVKTGMGGKAGNKGAVAIRFQFHSSSFCFVCCHLTAGQCQVKERNEDYREIT------QK 1001

Query: 191  LKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSL 234
            L   + +   S       GDFN +I+              WK +                
Sbjct: 1002 LSFPMGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIF 1061

Query: 235  IRFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYN 281
              F +         K              R     D      +           + +  +
Sbjct: 1062 KDFHEGTIDFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKRHPSDRTAGELNLLDSD 1121

Query: 282  ED---------------DIKSRGKRLSDHCPISI 300
             D                      + SDH P+  
Sbjct: 1122 LDAGTQLRHTWSPGALKYYGRAELQASDHRPVLA 1155


>gi|254713759|ref|ZP_05175570.1| AP endonuclease domain-containing protein [Brucella ceti M644/93/1]
 gi|254717183|ref|ZP_05178994.1| AP endonuclease domain-containing protein [Brucella ceti M13/05/1]
          Length = 322

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 62/249 (24%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 114 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 163

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 164 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 209

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N               +      
Sbjct: 210 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKR--IAELAAITPA 257

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    R          +PID                          I  +    SD
Sbjct: 258 PPTGPTWLYRRLPASLRFAGLPIDQTFAKGRVA--------------ISKITRQQPIGSD 303

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 304 HLPVLVEFS 312


>gi|226951934|ref|ZP_03822398.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. ATCC 27244]
 gi|294649195|ref|ZP_06726634.1| endonuclease/exonuclease/phosphatase [Acinetobacter haemolyticus
           ATCC 19194]
 gi|226837474|gb|EEH69857.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. ATCC 27244]
 gi|292824913|gb|EFF83677.1| endonuclease/exonuclease/phosphatase [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 383

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 60/251 (23%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL +  ++L  D+V   E  +            W    S+       +     D  
Sbjct: 116 DQYHLLLKQIESLKPDVVLTLESDA-----------VWQQALSSIEKDYPYRVPVPLDNL 164

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   +L  +           +   + +    + V    L       
Sbjct: 165 YGMHLYSRLPLSHSEVKFILSDEIPS--------IHTTLTLPSG-LHVQLYCLHPKPPSP 215

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           +     +   + L      +KD            ++ GD N            ++ I   
Sbjct: 216 TEAKDSTLRDAELLIVGDQIKDL-------DQSCIVMGDLNDVAWSRTTR--LFQRIS-- 264

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +   ++K     
Sbjct: 265 GLLDPRVGRYFMNTFHADYPLLRWSLDHIFHS--------------TDFGLVEMKRLAHI 310

Query: 292 LSDHCPISIDY 302
            SDH PI +  
Sbjct: 311 GSDHFPIYVVL 321


>gi|194670195|ref|XP_596626.4| PREDICTED: synaptojanin 2 [Bos taurus]
          Length = 2094

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 85/334 (25%), Gaps = 65/334 (19%)

Query: 26   LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--VFLQEMGSYN 78
            + +WN+N   +     L    +     D   L +     D     ADI  V  +EM   +
Sbjct: 1141 VGTWNVNGGKQFRSNLLGTAELADWLLDAPSLCRVTGPPDDGGSPADIFAVGFEEMVELS 1200

Query: 79   AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPL 130
            A   V    T    +  +     S+      + +A        I VR  ++  ++     
Sbjct: 1201 AGNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPHHIPFIRDVAMD 1260

Query: 131  LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                    +AGN+ AV +  + +      +  HL +        N      +      Q 
Sbjct: 1261 TVKTGMGGKAGNKGAVAIRFQFHSSSFCFVCCHLTAGQCQVKERNEDYREIT------QK 1314

Query: 191  LKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSL 234
            L   + +   S       GDFN +I+              WK +                
Sbjct: 1315 LSFPMGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIF 1374

Query: 235  IRFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYN 281
              F +         K              R     D      +           + +  +
Sbjct: 1375 KDFHEGTIDFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKRHPSDRTAGELNLLDSD 1434

Query: 282  ED---------------DIKSRGKRLSDHCPISI 300
             D                      + SDH P+  
Sbjct: 1435 LDAGTQLRHTWSPGALKYYGRAELQASDHRPVLA 1468


>gi|301775681|ref|XP_002923255.1| PREDICTED: sphingomyelin phosphodiesterase 3-like [Ailuropoda
           melanoleuca]
 gi|281349928|gb|EFB25512.1| hypothetical protein PANDA_012375 [Ailuropoda melanoleuca]
          Length = 658

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 81/303 (26%), Gaps = 75/303 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A AK+  +    +        +       S   +++ +    +   
Sbjct: 357 NLDFLCLQEVFDKRAAAKLKDQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLFFASRYPI 416

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +    +     + S   A ++ A+ L V++         +   S   L +L        +
Sbjct: 417 MDVAYHCYPNGRRSDGLA-SKGALFLKVQVGSTPQDQRIVGYISCTHLHALP----EDSA 471

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +  +Q   L+DW+   ++S                VI GDFN                  
Sbjct: 472 IRCEQLDLLQDWLADFRKSTSSSSTANPEELVAFDVICGDFNFDNCSSDDKLEQQHSLFT 531

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSR----------------CNANKNL 251
                              T+   D+L                             +K+ 
Sbjct: 532 HYKDPCRLGPGEEKSWVIGTLLDTDNLYDEEVCTPDNLQKVLESEEGRREYLAFPTSKSP 591

Query: 252 ------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                        N   IDY +  +       +    E  +           L+DH P++
Sbjct: 592 GAGQKGRKDLLKGNGRRIDYMLYAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVA 646

Query: 300 IDY 302
           +  
Sbjct: 647 MRL 649


>gi|265990736|ref|ZP_06103293.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263001520|gb|EEZ14095.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 358

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 150 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 199

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 200 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 246 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 288

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 289 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 339

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 340 HLPVLVEFS 348


>gi|265994574|ref|ZP_06107131.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3
           str. Ether]
 gi|262765687|gb|EEZ11476.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3
           str. Ether]
          Length = 358

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 150 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 199

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 200 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 246 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 288

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 289 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 339

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 340 HLPVLVEFS 348


>gi|321399241|emb|CBZ08543.1| apurinic/apyrimidinic endonuclease-redox protein [Leishmania
           infantum JPCM5]
          Length = 447

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 87/335 (25%), Gaps = 88/335 (26%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----MGSYNAV 80
           + ++WN+  L                  + + LR + +    D++ LQE    +   +A 
Sbjct: 131 KFITWNVAGLRGL------------LKKNASALRAFMEAEKPDVLCLQETKLNVDEADAN 178

Query: 81  AKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           A +   + +            +S   +     T +   K+      + + L     + + 
Sbjct: 179 ATLGVVDGYSFVDHPCAFKRGYSGTRTYMKNSTTV---KRLHARCTRGFALPSEPQAGAA 235

Query: 140 AGNRRAVELLVEINGKKIWVL------------------DIHLKSFCFLDSLENTYSPSC 181
           AG+   VE   +  G+ +                          S   L  L        
Sbjct: 236 AGSPVLVEGAGDEEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFD 295

Query: 182 SLLSQQAQWLKDWITQKK-----------ESLVPFVIAGDFNRKINYLGNNDD------- 223
             + +  Q L  W T+              S   F+ AGD N                  
Sbjct: 296 PSMREYLQRLDTWATENAAVPSAAAKGGDSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQ 355

Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                       F +T+   +S+  F +              +           +DYFV+
Sbjct: 356 ECSGFAPEERISFRETMQRTNSVDVFRQLYPHAGPVYSFWSQRINGRPRNLGWRLDYFVV 415

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                            Y  D         SDHCP
Sbjct: 416 SSRLAS-----------YVVDCFPMPTVMGSDHCP 439


>gi|254701416|ref|ZP_05163244.1| AP endonuclease domain-containing protein [Brucella suis bv. 5 str.
           513]
 gi|254707661|ref|ZP_05169489.1| AP endonuclease domain-containing protein [Brucella pinnipedialis
           M163/99/10]
 gi|254709756|ref|ZP_05171567.1| AP endonuclease domain-containing protein [Brucella pinnipedialis
           B2/94]
 gi|256031246|ref|ZP_05444860.1| AP endonuclease domain-containing protein [Brucella pinnipedialis
           M292/94/1]
 gi|256159357|ref|ZP_05457140.1| AP endonuclease domain-containing protein [Brucella ceti M490/95/1]
 gi|256254654|ref|ZP_05460190.1| AP endonuclease domain-containing protein [Brucella ceti B1/94]
 gi|256369061|ref|YP_003106569.1| AP endonuclease family 1 domain protein [Brucella microti CCM 4915]
 gi|294851991|ref|ZP_06792664.1| AP endonuclease domain-containing protein [Brucella sp. NVSL
           07-0026]
 gi|255999221|gb|ACU47620.1| AP endonuclease family 1 domain protein [Brucella microti CCM 4915]
 gi|294820580|gb|EFG37579.1| AP endonuclease domain-containing protein [Brucella sp. NVSL
           07-0026]
          Length = 322

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 114 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 163

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 164 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 209

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 210 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 252

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 253 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 303

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 304 HLPVLVEFS 312


>gi|303312043|ref|XP_003066033.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105695|gb|EER23888.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 522

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/347 (11%), Positives = 68/347 (19%), Gaps = 84/347 (24%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           NI TL+      + K   +R       L         +IV LQE  +      +  +   
Sbjct: 15  NILTLNCWGLKFISKYRRERLLEIGKRLASL--EPPPEIVGLQECWTQQDYNNIRKETRH 72

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKDSFSRAGNRR 144
            + Y                    +A+  K        +         A         + 
Sbjct: 73  ILPYGKFYFSGIFGG--------GLAILSKWPIEESSMFGYPLNGRPTAFFRGDWFVGKG 124

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                + I      +  +           E   S  C   + QA  +   +    E    
Sbjct: 125 VACARIRIGPGPSDIAAVFCTHLHAPYEREPHDSYIC-HRTAQAWEMAKLMRGAAEKGHL 183

Query: 205 FVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKE---------------- 240
            +  GDFN     L +          D W+ + P+ SL                      
Sbjct: 184 VIGLGDFNMLPLSLAHRLITTHAPVQDVWRYLHPDSSLGAAIDAVEMARKRPVPSAEYNL 243

Query: 241 -----KDSRCNANKNLRNKI----------------------PIDYFVMDQNAYKFLIQE 273
                                                      +DY  +           
Sbjct: 244 SENGVTCDGLFNTWRWNKGQQKRLEKEGHIEVDGRLPDPLGKRLDYIFVGNGGPTLQPSS 303

Query: 274 SFSEILYNEDDIKSRGKR-----------------LSDHCPISIDYD 303
           S       +     +                    LSDH  +     
Sbjct: 304 SSPTQSSVQQRSDWKWTIESARVSMTERHPTLHCSLSDHFAVEAVIS 350


>gi|225852147|ref|YP_002732380.1| hypothetical protein BMEA_A0660 [Brucella melitensis ATCC 23457]
 gi|225640512|gb|ACO00426.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
          Length = 358

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 150 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 199

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 200 AILSRRPFIADSAPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 246 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 288

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 289 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 339

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 340 HLPVLVEFS 348


>gi|260757609|ref|ZP_05869957.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str.
           292]
 gi|261213636|ref|ZP_05927917.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
 gi|260667927|gb|EEX54867.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str.
           292]
 gi|260915243|gb|EEX82104.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
          Length = 357

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 149 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 198

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 199 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 244

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 245 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 287

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 288 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 338

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 339 HLPVLVEFS 347


>gi|239790439|dbj|BAH71781.1| ACYPI000743 [Acyrthosiphon pisum]
          Length = 438

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 67/235 (28%), Gaps = 18/235 (7%)

Query: 24  VRLVSWNI---NTLSEQEGVSLWKN-SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             L+S+NI     L +   +  W +  V        LL +  K  +ADI+  QE+   + 
Sbjct: 66  FSLLSYNILAQELLEKNAFLYDWSDVRVLNWDYRRQLLLKEIKQFNADIICFQEVQESHL 125

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    +           + KR   +    AI  R     + ++             
Sbjct: 126 ------NWFFKKLSDLGYNGVYKKRTRFHCDGCAIYYRNDKFTLKEKVTVGYNQPGINVL 179

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-----DW 194
             +   + L +     +   + +      +     +       LL  + + +        
Sbjct: 180 DRDNVGIVLRLSPRKNEAENIIVSTTHILYNKKRHDIKLAQVHLLLAEIERVAYKGHKKV 239

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI---DPNDSLIRFPKEKDSRCN 246
                    P ++ GDFN + N    +      +   +     +     +  RCN
Sbjct: 240 GDDNIPEYHPIILTGDFNLEPNTAVYDFLINGALFYSNLQKPTLWSQNNQSGRCN 294



 Score = 37.2 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/58 (12%), Positives = 14/58 (24%), Gaps = 1/58 (1%)

Query: 248 NKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +        +DY      N       +  +                SDH P+   + +
Sbjct: 378 STYHDQWTIVDYIFYTSTNLKLKAYMKLPNVAECQPILAMPNRVSPSDHLPLFAKFIY 435


>gi|117165175|emb|CAJ88731.1| putative membrane protein [Streptomyces ambofaciens ATCC 23877]
          Length = 295

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 74/289 (25%), Gaps = 66/289 (22%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L+P     A  + +V  N+                    SD +   +       D++ L
Sbjct: 68  LLLPAPEPDAADLVVVQHNV----------------SDENSDPSGTARALAGAGPDLIAL 111

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+ S                         +       +   + +  K+     +  PL 
Sbjct: 112 QELVSPAL---------------GVYTETLAAEYPYRAVRGTVGLWSKHPLADVR--PLD 154

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                 +R  NR  +  +V     ++ V   HL S               S     A  L
Sbjct: 155 IRPRGITREWNRG-LRTVVRTPRAEVAVYVAHLPSVRVGAGGLAASRRDES-----AGLL 208

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            D +    E L   V+ GD N  ++         + + P  S +   +   +        
Sbjct: 209 GDAVA--AERLSRVVLLGDLNGTVDD--------RALKPLTSRLDVAERGVALSFPAVFP 258

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                ID  +        +     +                SDH P+  
Sbjct: 259 L--ARIDQVMARSATVGHVRTLPAT---------------GSDHLPVVA 290


>gi|261218999|ref|ZP_05933280.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1]
 gi|261321501|ref|ZP_05960698.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1]
 gi|260924088|gb|EEX90656.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1]
 gi|261294191|gb|EEX97687.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1]
          Length = 357

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 62/249 (24%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 149 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 198

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 199 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 244

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N               +      
Sbjct: 245 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKR--IAELAAITPA 292

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                    R          +PID                          I  +    SD
Sbjct: 293 PPTGPTWLYRRLPASLRFAGLPIDQTFAKGRVA--------------ISKITRQQPIGSD 338

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 339 HLPVLVEFS 347


>gi|290976169|ref|XP_002670813.1| predicted protein [Naegleria gruberi]
 gi|284084376|gb|EFC38069.1| predicted protein [Naegleria gruberi]
          Length = 282

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 80/301 (26%), Gaps = 61/301 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIVFLQEMGSYNAVA 81
           + +V++N+              +          + Q    +    D++  QE+       
Sbjct: 19  LNIVTFNVWF------------APLMMKERMEGIMQMLMAREELPDVMCFQEVTDEALEF 66

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +     +Y +     +    + +     +AVRK           L           
Sbjct: 67  IASHELIRKEYYLS--DSPNDYYTTVDPYGVLMAVRKGLPVRRMFYNTLPS-------RM 117

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  + + +    +   +  +HL+S    D           +  +Q   + ++      +
Sbjct: 118 YRACLSVELNDGKESFCISTVHLESLASTD-----------MRFKQLDVISEFQQAFDNA 166

Query: 202 LVPFVIAGDFNRKINYLGNND-------------------DFWKTIDPNDSLIRFPKEKD 242
               V+ GDFN       + D                   D WK +    + +    +  
Sbjct: 167 ----VLCGDFNFDSERNYDEDYLPYLENDYLNNENWKSYTDIWKELKYPSNELGKTFDTS 222

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                       +  D  +          + +F E+L       +    LSDH  I    
Sbjct: 223 VNTMLKGQKEELMRYDRVM----LKSKSWKPTFVELLGTSPIQTNPDIFLSDHFGICTRI 278

Query: 303 D 303
           +
Sbjct: 279 E 279


>gi|323456026|gb|EGB11893.1| hypothetical protein AURANDRAFT_70680 [Aureococcus anophagefferens]
          Length = 789

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 58/219 (26%), Gaps = 52/219 (23%)

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDS-------FSRAGNRRAVELLVEINGKKIWVLDIHL 164
              AV  +   V      L                  +R  V   VE+  +++     HL
Sbjct: 593 FGNAVLSRRPFVDAGHLVLAAEPGDVRLGGQRRDDVESRGVVWAAVEVGDERVGFAAAHL 652

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
                          +  L  +Q     D +     +L   ++ GD N       ++D  
Sbjct: 653 DH------------KAEELREKQIGRCLDHVNAHCPALH--LVCGDLNTF-RRADHSDAA 697

Query: 225 WKTIDPNDSLIRFPKEKD--------------------SRCNANKNLRNKIPIDYFVMDQ 264
           W  I    +   +P+  +                    +             ID+ +++ 
Sbjct: 698 WDAIVAFYASRGWPRPAERSLALDACEARGYADAGAGAAPDVTCWTHNPLFRIDHVLLND 757

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +            + ++ +      SDH P++ D  
Sbjct: 758 GLRRAC----------DVENYRRVESAASDHFPVAFDLT 786


>gi|308449420|ref|XP_003087957.1| hypothetical protein CRE_04467 [Caenorhabditis remanei]
 gi|308250749|gb|EFO94701.1| hypothetical protein CRE_04467 [Caenorhabditis remanei]
          Length = 372

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 73/269 (27%), Gaps = 45/269 (16%)

Query: 34  LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY 93
           L+  + +S+  ++V      Y LL +  +    DIV   E               W    
Sbjct: 96  LNPDQQISVIVSNVLTPNDQYHLLLEQIEQHQPDIVLTLETDQT-----------WQNEL 144

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           +        +     D    + +  K   V  +   +L  +              ++  +
Sbjct: 145 AQIEKDYPYRVAIPLDNLYGMHLYSKLKLVDTEVKFILSDEIPSIHT-------TVILPS 197

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
           G+ + +  +H K     ++ ++T   +          L     Q K+     ++ GD N 
Sbjct: 198 GQAVQLYCLHPKPPSPTEAKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLND 248

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
                      ++ I     L      +            +  +D+              
Sbjct: 249 VAWSRTTR--LFQRIS--GLLDPRVGRRYINTFHADYKFLRWSLDHLFHS---------- 294

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +    ++      SDH PI +  
Sbjct: 295 ----TDFALVHMQRLPHVGSDHFPIYVVL 319


>gi|170091670|ref|XP_001877057.1| inositol polyphosphate phosphatase [Laccaria bicolor S238N-H82]
 gi|164648550|gb|EDR12793.1| inositol polyphosphate phosphatase [Laccaria bicolor S238N-H82]
          Length = 1024

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/309 (10%), Positives = 85/309 (27%), Gaps = 53/309 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N     E +  W    +    D+ +     + +    +  Q++   +   ++  
Sbjct: 595 VGTWNLNGRPPSESLLPWLFPPESKHPDFYMFVLGFQEIVP--LTAQQILQTDPEKRLVW 652

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +            I ++     ++        + V+++   V++              +G
Sbjct: 653 ERKILDTLKKRPNIKNNYVILRSEQLVGTALMVLVKEELTSVIRNVEGTSRKTGLRGMSG 712

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           N+ AV + ++ +      L  HL +        N    + +      +       +   +
Sbjct: 713 NKGAVGIRLDYHDTSFCFLTAHLAAGHSNVEERNADYRTIAHGLHFQK------GKTIGT 766

Query: 202 LVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSRC 245
               +   D N +I+    +                D   + ID   +   + +      
Sbjct: 767 HENVIWLADTNYRIDLDNFSVRSLAEASDFDTLLAADQLKQVIDSGAAFTGYEEGPILFA 826

Query: 246 NANKNL--------RNKIPI----DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +            K+ I    D  +   +     +                   + S
Sbjct: 827 PTYRYDVGTDNYDTSEKMRIPAWTDRILYRGSQLDLAV-------------YSRSDLKSS 873

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 874 DHRPVFAIF 882


>gi|147834770|emb|CAN72707.1| hypothetical protein VITISV_043786 [Vitis vinifera]
          Length = 1372

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/255 (11%), Positives = 65/255 (25%), Gaps = 53/255 (20%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++   +    D+V +QE         V        F     L               + V
Sbjct: 186 IKSVVRKQKVDLVCIQETKIQAMTDGVVKSLGVGRFLDWRTLEATGAAG-------GVLV 238

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLEN 175
                 +           D       + +V      +    +WV       F        
Sbjct: 239 CWDKRSL-----------DLLEWEEGQFSVSCKFRTVENGTVWVFTGVYGPF-------- 279

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------FWK 226
                   L ++   ++           P+ + GDFN  +     +           F +
Sbjct: 280 -NKKDRECLWEELGAVRGLW------GDPWCVGGDFNVTLAQGERSRQGRVTSAMRRFAQ 332

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +D  + +    +      +     +    +D F++                 ++    K
Sbjct: 333 VMDDLELIDLPLQGGSFTWSGGLYNQAWARLDRFLVAPR----------WLDQFSNVTQK 382

Query: 287 SRGKRLSDHCPISID 301
              + +SDH PI+I+
Sbjct: 383 RLSRPISDHFPITIE 397


>gi|73963495|ref|XP_853568.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 72/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +             +   +++    +K ++        
Sbjct: 103 -------SIQQEDLTILNIYAPNVG-----------AAKYINRLLTKVKKYLDNN----- 139

Query: 204 PFVIAGDFNRKINY---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN  ++                   T+D  D    +     +           
Sbjct: 140 -TLILGDFNLALSILDRSSKQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|66546725|ref|XP_395173.2| PREDICTED: synaptojanin-1 [Apis mellifera]
          Length = 1152

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/323 (10%), Positives = 72/323 (22%), Gaps = 49/323 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-------IVFLQEMGS 76
           V + ++N+N       V     S+     D         +++ D        +  +E+  
Sbjct: 533 VSVGTYNVNGGKHFRSVVYKDVSLSDWLLDAPQKSSSLVSVEYDNVPVDIFAIGFEEIVD 592

Query: 77  YNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVRVLQQSY 128
            NA   +         W          +             +     +R K+   L+   
Sbjct: 593 LNASNIMAASTDNAKAWAEELQKVLSRDTEYVLVTYQQLVGVCLYLFIRPKHAPYLRDVA 652

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                       GN+ A  +   +       +  H  +     +  N      +      
Sbjct: 653 VDCVKTGLGGATGNKGAAAIRCVLYSTSFCFVCAHFAAGQSQVNERNADYAEITRK---- 708

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPND 232
             +   + +   +       GDFN +++   +                 D      +  +
Sbjct: 709 --ITFPMGRTLNTHDYVFWCGDFNYRVDMDKDEMKEMIKKNEFNQILQYDQLKVQQNHGN 766

Query: 233 SLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQESFSEILY 280
               F +         K                    D  +  +      I         
Sbjct: 767 VFKNFLEGPIIFAPTYKYDLFSDDYDTSEKCRQPAWTDRILWKRRKQVPDIDSPTDWNPG 826

Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303
                     + SDH P+    D
Sbjct: 827 KLIHYGRAELKQSDHRPVIAIID 849


>gi|34392578|dbj|BAC82621.1| pol-like protein [Danio rerio]
          Length = 1148

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 82/312 (26%), Gaps = 83/312 (26%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
             ++L   L+         + + + N+                 R+      +  + K L
Sbjct: 1   MFISLFHLLMA--------LTISTINVR--------------SVRSPIRAQSVLSFLKLL 38

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            +D+  LQE         +   + +  +             SN + +  +A+  KN  +L
Sbjct: 39  KSDVFLLQEC-------ALPFISNYRKWEDVWTPGPSLWSGSNQNKNDGVAILIKNPNIL 91

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            +   ++             A  + +   G+   VL+I+             Y       
Sbjct: 92  VKGTTVVRDGR---------AFLVTLTFLGRDFNVLNIYGH-----TDKNERY------- 130

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-------------IDPN 231
                 L + +        P V+AGDFN  +         +K                  
Sbjct: 131 -----ELLEDLQPHMLGKPPLVVAGDFNCILTQKDRKKADFKLDKTSTLLNNLVKDFKLV 185

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           D   +    ++     + +  +   IDY                    +   D       
Sbjct: 186 DCFRQVHPREEGFTWFSSDSTSASRIDYIFTRD---------------FPPVDATLTPTF 230

Query: 292 LSDHCPISIDYD 303
            SDH  +S    
Sbjct: 231 FSDHTILSCTLS 242


>gi|258653500|ref|YP_003202656.1| endonuclease/exonuclease/phosphatase [Nakamurella multipartita DSM
           44233]
 gi|258556725|gb|ACV79667.1| Endonuclease/exonuclease/phosphatase [Nakamurella multipartita DSM
           44233]
          Length = 263

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/274 (10%), Positives = 69/274 (25%), Gaps = 55/274 (20%)

Query: 57  LRQYAKNLDADIVFLQEMG----------------SYNAVAKVFP------KNTWCIFYS 94
           L  +  +  AD++ LQE+                 +    A +F        +   +F +
Sbjct: 17  LLSWIADDPADVLCLQEVPRIPGGSGWTQFADGERTLPQRADLFADVSSALPHHQGLFVA 76

Query: 95  TERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRR-----AVEL 148
           ++                 +A      V ++      +  +    R   R      A+ +
Sbjct: 77  SDSGPVTDADGRPRQQQFGVATFVSDAVPLVGVESAFVHGRYVAHRQWPRGDRPRAALAV 136

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
            + +   +   +             +            QA  L D +T  +      V+ 
Sbjct: 137 RLAVEATRFITVV------QLHGLRDPAGKQDTPAREGQAHRLADLVTHARGPGDLTVVC 190

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
           GD N            ++ +              +    ++  +      Y ++ +    
Sbjct: 191 GDLNLLPTSH-----TFQVLAGIGLTDLV---GTADTRTSRYPKPTRHASYLLISEPDAA 242

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                  +SDH P+ ++ 
Sbjct: 243 RTFTIPAHPE-------------VSDHRPLVLEI 263


>gi|260168382|ref|ZP_05755193.1| AP endonuclease family 1 domain protein [Brucella sp. F5/99]
 gi|261757842|ref|ZP_06001551.1| endonuclease/exonuclease/phosphatase family [Brucella sp. F5/99]
 gi|261737826|gb|EEY25822.1| endonuclease/exonuclease/phosphatase family [Brucella sp. F5/99]
          Length = 322

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 114 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 163

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 164 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 209

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 210 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 252

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 253 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 303

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 304 HLPVLVEFS 312


>gi|225554351|gb|EEH02650.1| SacI domain and endonuclease/exonuclease/phosphatase [Ajellomyces
           capsulatus G186AR]
          Length = 1241

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 87/314 (27%), Gaps = 39/314 (12%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL--QEM 74
           + ++ VR  + ++N+N  +     +     +     +             +IV L  Q++
Sbjct: 606 TSSKTVRIWVGTFNLNGRTNGANGTNLSPWLLPQLDNLQETPSIFAIGFQEIVELSPQQI 665

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKKNVRVLQQSYPLLG 132
            S +   ++  +N      +               +      A+       L     ++ 
Sbjct: 666 MSTDPGNRMIWENAVKHTLNDYANRKGESEYVLLRSGQLVGTALLIFVKSELLSEIKVVE 725

Query: 133 A----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQ 187
                      AGN+    +  + +  +I  +  HL +     D     Y      L  Q
Sbjct: 726 GSVKKTGMSGMAGNKGGCAIRFQYSNTRICFVTAHLAAGFSNYDERNRDYQTINQGLRFQ 785

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPN 231
                    +  E     +  GDFN +I                    ++D     +   
Sbjct: 786 R-------NRSIEDHDTIIWLGDFNYRIGLPDDTVRGLIKAGDFESLYSHDQLNLQMVAG 838

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRG 289
            +   + + + +     K        D     + A    +  +  +        +  +  
Sbjct: 839 LTFPFYSEARITFPPTYKYDNGTDQYD---TSEKARTPAWCDRILWKGANIRLLEYNAAP 895

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+   +D
Sbjct: 896 LKFSDHRPVYATFD 909


>gi|256044324|ref|ZP_05447228.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|260563678|ref|ZP_05834164.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. 16M]
 gi|260153694|gb|EEW88786.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. 16M]
          Length = 322

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 114 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 163

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 164 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 209

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 210 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 252

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 253 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 303

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 304 HLPVLVEFS 312


>gi|227889347|ref|ZP_04007152.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200]
 gi|227850149|gb|EEJ60235.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200]
          Length = 179

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/178 (10%), Positives = 40/178 (22%), Gaps = 43/178 (24%)

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
           + +     + +++ +          +               L  +         P +I G
Sbjct: 17  ITLEFSNFYFINVQVPFLGEKLQRLDFRELWAQTFRNYVTKLMQY--------KPVIIGG 68

Query: 210 DFNRKIN-------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-------NKNLRNK- 254
           D +              ++   +  I+  +                            + 
Sbjct: 69  DMSVAHERIDLAEPDDNHHRPGFTGIERKEVFELLNAGFIDTFRYFHPDEAKYTYWSYRD 128

Query: 255 ---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +DYF++  N    L                      SDHCPI +D D
Sbjct: 129 KEARAENLGWRLDYFLVSNNLEDKLTNAKIL-----------SNIMGSDHCPIELDVD 175


>gi|148559397|ref|YP_001258615.1| AP endonuclease domain-containing protein [Brucella ovis ATCC
           25840]
 gi|261315157|ref|ZP_05954354.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M163/99/10]
 gi|261317287|ref|ZP_05956484.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94]
 gi|265988325|ref|ZP_06100882.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M292/94/1]
 gi|148370654|gb|ABQ60633.1| AP endonuclease family 1 domain protein [Brucella ovis ATCC 25840]
 gi|261296510|gb|EEY00007.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94]
 gi|261304183|gb|EEY07680.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M163/99/10]
 gi|264660522|gb|EEZ30783.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M292/94/1]
          Length = 357

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 149 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 198

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 199 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 244

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 245 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 287

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 288 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 338

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 339 HLPVLVEFS 347


>gi|147797881|emb|CAN63072.1| hypothetical protein VITISV_025643 [Vitis vinifera]
          Length = 740

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  +     +           F +T+D  + +    +  +   N   N +
Sbjct: 600 DDPWCLGGDFNITLFQPERSSQRRISSAMRRFAETVDDLELVDLPFQGGEFTWNGGLNNQ 659

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F++  +        S               + +SDH PI ++
Sbjct: 660 VWARLDRFLVSPSWLDQFSGVS----------QSRLSRPISDHFPIVLE 698


>gi|218515815|ref|ZP_03512655.1| exodeoxyribonuclease III protein [Rhizobium etli 8C-3]
          Length = 142

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 32/159 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+ D DIV LQE+ +   + + 
Sbjct: 1   MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP+            + +            +A+  K+            A D  +R    
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKSSPSEVNRGLPGDALDEQARF--- 91

Query: 144 RAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSC 181
             +E +  +   +I  V  I+L +   +++ + +     
Sbjct: 92  --LEAVFTLPDTRILRVCCIYLPNGNPVETGKISLQARL 128


>gi|329934219|ref|ZP_08284298.1| putative membrane protein [Streptomyces griseoaurantiacus M045]
 gi|329305815|gb|EGG49670.1| putative membrane protein [Streptomyces griseoaurantiacus M045]
          Length = 329

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/281 (9%), Positives = 64/281 (22%), Gaps = 69/281 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + +V+ N+N                          +      AD++ L+E+G  +  
Sbjct: 113 GGNLTVVTHNVN----------------EHNPRPVRTARALAGSGADVLALEELGGPSTA 156

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                      ++     +                +  +      ++  +          
Sbjct: 157 TYERTLADTYRYHCVHGTVG---------------LWSRYPVADARTVDIAPWPR----- 196

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
               A+   V      + V   HL S  F   S   + +   +     A    + +    
Sbjct: 197 ----ALRATVRTPEGPVAVFVAHLMSVRFTAGSGFASDARDAAARRLTAAVRAELL---- 248

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
                 ++ GD N   +                S+                      ID+
Sbjct: 249 ---PRTILVGDLNGTTDD----RALSGLTSRLRSVQDESGAGFGASWPASFP--VARIDH 299

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            ++       +   S   +              SDH P++ 
Sbjct: 300 ILVRG-----VEPRSAWTLPAT----------GSDHLPVAA 325


>gi|255085004|ref|XP_002504933.1| predicted protein [Micromonas sp. RCC299]
 gi|226520202|gb|ACO66191.1| predicted protein [Micromonas sp. RCC299]
          Length = 209

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 60/209 (28%), Gaps = 17/209 (8%)

Query: 27  VSWNI-----NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +S+N+           E      +S+         + Q  K L  D++ LQE   ++ +A
Sbjct: 1   MSYNLLADSHAWKYRNELYRGIHDSILSWRRRLRGIVQEVKALRPDVLCLQECEDFHGIA 60

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  +   ++         R       +++  R    R            D    A 
Sbjct: 61  AALAGCGYTGLHAP--------RAGGRTDGSSVFYRTSVFRCAAFEAVDFTDFDLRENAA 112

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               + +    N K + V  +HL         +           +  +    ++      
Sbjct: 113 AVACL-VPSHPNAKPVVVGCVHLLFNPRRGDRKLGQLRVFVERVEAMRD--KYVGAVGGD 169

Query: 202 LVP-FVIAGDFNRKINYLGNNDDFWKTID 229
             P  ++ GDFN + +          T+D
Sbjct: 170 AAPHAMLVGDFNAEPDSPLYRFIVDGTLD 198


>gi|149200749|ref|ZP_01877724.1| hypothetical protein RTM1035_14027 [Roseovarius sp. TM1035]
 gi|149145082|gb|EDM33108.1| hypothetical protein RTM1035_14027 [Roseovarius sp. TM1035]
          Length = 324

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/325 (8%), Positives = 69/325 (21%), Gaps = 60/325 (18%)

Query: 34  LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF--------- 84
           L       L ++  +   +    +         DI+ LQ +     +  +          
Sbjct: 3   LERAGPGLLLRDLRRGEDAQIAAILHVLAQTQPDILVLQGVDYDLDLLALSALRDRISEG 62

Query: 85  PKNTWCIFYSTERLINH-----------------SKRDSNNDIHTAIAVRKKNVR----- 122
               +   ++                        ++   +      +A+  +        
Sbjct: 63  GGPRYDHLFARTPNAGLATGLDMDGDGRRGGPRDAQGYGDFTGQGGMAILSRYPVDQPGA 122

Query: 123 -----VLQQSYPLLGAKDSFSRAGN------------RRAVELLVEINGKKIWVLDIHLK 165
                VL +  P         +               R    + V +    + V+  H  
Sbjct: 123 QDFSAVLWRDLPGALLPMRDGQPFPSEAAQAVQRLASRGQWVVPVLLPSGPMQVMTFHAT 182

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
              F    +     +   L     +L             FV+ G  N      G   +  
Sbjct: 183 PPVFDGPEDRNGRRNHDELRFWQLYLDG--AFGPPPQGWFVLMGHANLDPGAGGGRPEAL 240

Query: 226 KTIDPN----DSLIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEI 278
           + +  +    D     P   +                 + Y +    A    + ++    
Sbjct: 241 RALLADPRLQDPRPLRPGAVEPPLATVHWPPPGPGTRRVSYIL---PAADLSVTDAGVHW 297

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
                         S H  + +D  
Sbjct: 298 PPEGTPEGDLAATASRHRLVWVDLS 322


>gi|302532763|ref|ZP_07285105.1| polynucleotide adenyltransferase [Streptomyces sp. C]
 gi|302441658|gb|EFL13474.1| polynucleotide adenyltransferase [Streptomyces sp. C]
          Length = 283

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 46/204 (22%), Gaps = 33/204 (16%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             A     VRL++WN            +      T     +L       DAD++ LQE+ 
Sbjct: 113 PAAHPPASVRLLTWNTLW-------DRYDAPRIATARRRPMLLADLAVADADVIALQEVE 165

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  +        +                     + V  +        + L   K 
Sbjct: 166 PALLALLLAEPWVRDGYTLGTDPRGTDVA------DNGLLVLSRLPVREAGMHELRPHK- 218

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                       + V+  G  + V   HL S    D                   L    
Sbjct: 219 --------AVTAVTVDTAGGPLVVAATHLTSDHTEDGAARRERE-----------LARLA 259

Query: 196 TQKKESLVPFVIAGDFNRKINYLG 219
                      + GDFN   +   
Sbjct: 260 EGLAGIGAGVALLGDFNDGRSGAE 283


>gi|255008007|ref|ZP_05280133.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis 3_1_12]
 gi|313145723|ref|ZP_07807916.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134490|gb|EFR51850.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 344

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/359 (8%), Positives = 69/359 (19%), Gaps = 78/359 (21%)

Query: 1   MIRKYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           M + + + L   +     S    +  ++ WN+                      Y  +  
Sbjct: 4   MKKIFFMTLFLLVTMVGQSKGKGEFTVLQWNVWQEGTMVPGG------------YDAIVN 51

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               L  D V   E+ +       +    +                S     T +    K
Sbjct: 52  EIVRLQPDFVTFSEVRN-------YHNTRFNDRIVASLKEKGLDYYSFYTYDTGLL--SK 102

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +      +                      V +    +  LD    +    D       P
Sbjct: 103 HPITDSLTVFPENGDHGSIYKLTSSVDGHKVAVYTAHLDYLDCAYYNVRGYDGSSWKEIP 162

Query: 180 S------------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND----- 222
                         S      +       +   +    ++ GDFN   +     +     
Sbjct: 163 IPTTVEEVLKVNVASQRDDAIKMFIAEAKKDIANGYSVIVGGDFNEPSHLDWIEENKNLY 222

Query: 223 --------DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI------------------- 255
                       T+   D  I   +        +                          
Sbjct: 223 DHNGLVIPWTVTTLLEKDGFIDTYRHIYPNPLTHPGFTYPADNPLKEPGKLTWAPKADER 282

Query: 256 -PIDYFVMDQNAYKFLIQESF-----------SEILYNEDDIKSRGKRLSDHCPISIDY 302
             ID+        +      F            +    +  +       +DH  + + +
Sbjct: 283 DRIDFIFYQGKDIEAKKAVIFGPKGSIVRNQRVQETSKDKFLLPLDVWPTDHKGLLVTF 341


>gi|125531835|gb|EAY78400.1| hypothetical protein OsI_33487 [Oryza sativa Indica Group]
          Length = 450

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/269 (10%), Positives = 66/269 (24%), Gaps = 46/269 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +  +++++N+           W             L    +  + D +  QE+ +     
Sbjct: 141 KTFKIMTYNV-----------WIREDIELHRRLGALGDLIQLHNPDFICFQEV-TPYIYQ 188

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL---------- 131
            +   + W  +          ++             +K   +                  
Sbjct: 189 LMEKSDWWQEYKCLLSHEMAMRKSHFCMQVPGNKENEKIEPLPVVVLHPPARGLPPNLEA 248

Query: 132 --------------GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                                    R     +V+     + V   HL+S C L  L    
Sbjct: 249 KLAGRMSKLPVSESNPIPFSKSIMKRELCVAVVKTGEIHLAVGTSHLESPCPLPPLW--D 306

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDS 233
                    QA+   + + Q + +    +  GD N        +   +      ++    
Sbjct: 307 LKYSEKRVAQAKQSLEILGQLRNA----IFCGDMNWEDKVDGPFPLPDGWIDAWVELKPG 362

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              +  +  +    + N + +   D FV 
Sbjct: 363 DNGWTYDTKANAMLSANFKQQKRPDRFVC 391


>gi|66804959|ref|XP_636212.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60464573|gb|EAL62710.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 573

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 92/351 (26%), Gaps = 75/351 (21%)

Query: 25  RLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNA 79
           R++ +NI     +S+         S++  +    LL +      ADIV  QE+    +  
Sbjct: 221 RIIQYNILADCYVSDSWYTHSASYSLRWNSYRSYLLIEQILQYKADIVGTQEVDRLYWQL 280

Query: 80  VAKVFPKNTWCIFYSTERLINH-------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
             ++  +  +  + S     N           +S  +       + +   +         
Sbjct: 281 FKEMNVRGGYDYYPSYANDSNESPQTTMGGFNNSYREGCFIFFKKDRFNLLQGLEIDYTK 340

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD--------------------- 171
                 +   +  VE+L++    K  +      S   +                      
Sbjct: 341 LNRPDQKLLKKELVEILIQDPIYKSCITHFLEHSSHHVHHALVLLQDKQTKQKMIVVSKH 400

Query: 172 ----SLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
               S    Y   C  +      L ++I   K E+ +P V+ GDFN   +     +   K
Sbjct: 401 MYWGSQGYNYHIQCVQIHLFTMILSNFIQVNKLENNIPIVVCGDFNSSPDDS-CYNFMTK 459

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLR---------------------------------- 252
            +  ND        K      +                                      
Sbjct: 460 GLMMNDDHHLTLAGKYPPAFNSSQFDNHPEIKSIKHDFNFLSSYSLRPDGEPKFTIVSRA 519

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ID   + ++ +K  +          +  +       SDH  +  D +
Sbjct: 520 FTGNIDQIFVSKDRFK--VNNVLEIGEKQDYKMLPSLTLASDHILLMTDLE 568


>gi|326671016|ref|XP_698057.4| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A-like [Danio rerio]
          Length = 769

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 79/313 (25%), Gaps = 50/313 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAKV 83
           +V+WN+ +    + ++                     + D  +V LQE+ S     +   
Sbjct: 210 IVTWNVGSGMPPDDITSLFGPGIEN-----------GSTDMFVVGLQEVNSMINKRLKDA 258

Query: 84  FPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSFSRA 140
              + W  +   T     +    S       + V  K  ++  L+               
Sbjct: 259 LFTDQWSELCMDTLSRFGYVLVASQRMQGVFLLVFSKFCHLPFLRGVQTQSTRTGLGGYW 318

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V   + + G  +  L+ HL +             S      Q Q  +        
Sbjct: 319 GNKGGVSARMMVFGHPVCFLNCHLPAHMRNLEQRMEDFESI----LQQQQFEGSNAVGVL 374

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR------------------------ 236
                   GD N +I     +       +    L+                         
Sbjct: 375 DHDVVFWFGDLNFRIEGYDIHVVKSAIENDKLPLLWEKDQLNMAKKSESVLEGFIEGPLK 434

Query: 237 --FPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI-KSRGK 290
                + D   +        R     D  +         +    S +  ++       G 
Sbjct: 435 FPPTYKFDVGTHTYDTSAKKRKPAWTDRILWRLRRTGSPVPSHNSALQLSQHFYCSHMGF 494

Query: 291 RLSDHCPISIDYD 303
            +SDH P+S  + 
Sbjct: 495 TISDHKPVSALFS 507


>gi|242209337|ref|XP_002470516.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730426|gb|EED84283.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1315

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 30/105 (28%), Gaps = 10/105 (9%)

Query: 200  ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            ++    +  GD N  +            +   + +   P    +        ++   ID+
Sbjct: 1190 DANASIIAGGDMNEFLQTRSVFAALQDLLRDINEIAGVP---PAERYTYVYDQHAQEIDH 1246

Query: 260  FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP----ISI 300
              +               +       ++ G+R SDH P    + +
Sbjct: 1247 IFVSPAIAARGADVEHVHMNT---WAQTMGERASDHDPSVARVWV 1288


>gi|192288798|ref|YP_001989403.1| Endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris
           TIE-1]
 gi|192282547|gb|ACE98927.1| Endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris
           TIE-1]
          Length = 372

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 74/298 (24%), Gaps = 37/298 (12%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKVF 84
           L +WNI      +          R       + +       D+V +QE+     A+ +V 
Sbjct: 41  LATWNIREFGGTKY-------RGRIPDALYCIAECISRF--DLVAVQEVRQDLVALKQVV 91

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   Y    +      +           R +   +  +      +         R 
Sbjct: 92  RILGRDWDYIYNDVSLADGGNGERLAFLFNRSRVRFTGLAGELVLPSKSASKLVAQIART 151

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE---S 201
                 +    K  +  +H+                       A   K +I        S
Sbjct: 152 PFICGFQSGWAKFNLCTVHIYYGEGKKDDPKRIEEIEKTAKLLADKAKSYINLDDPVDYS 211

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF- 260
               V+ GDFN      G  D  ++ +  N  +I  P  +    N +++       D   
Sbjct: 212 PENLVLLGDFNIF----GREDATFQALTKNRFVIPEPLLRQKGSNVSEDKFY----DQIA 263

Query: 261 VMDQNAYKFLIQESF---------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +                            +  +      R  ++SDH  +  +++
Sbjct: 264 FFKETRGIECSNAGVFNFYQYAFNDPKLYKGVMPASAAFNTWRTFQMSDHLIMWTEFN 321


>gi|147790936|emb|CAN77234.1| hypothetical protein VITISV_010061 [Vitis vinifera]
          Length = 3216

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 81/288 (28%), Gaps = 65/288 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++++SWNI  +++++                 +++   ++  AD+V L E    +    
Sbjct: 556 KIKIISWNIRGVNDRD--------------KRKVIKALIRSQKADLVCLXETKIQDISRX 601

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +              L   +           +    + + ++     L      F     
Sbjct: 602 II-----HSLGVGRFLGWGAMSARGAAGRVVVFWDXRVLELMGMEVGLFSVSCRFKN--- 653

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                                   + F      T         ++   ++   +      
Sbjct: 654 ------------------CXDGFLWTFTGVYGPTMKRHREXFWEELGAIRGLWS------ 689

Query: 203 VPFVIAGDFN--RKINYLGNN-------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            P+ I GDFN  R  +              F + I+                +   N  +
Sbjct: 690 DPWCIGGDFNVVRFPSERSREGRLTGSMRRFSEVIEELXLKDLPLHGGLFTWSGGLNGLS 749

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +  +D F++ ++           E  ++     S  + +SDH PI +D
Sbjct: 750 RSRLDRFLISED----------WENHFSGAXQCSLPRPVSDHFPILLD 787


>gi|326776701|ref|ZP_08235966.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657034|gb|EGE41880.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 394

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 58/274 (21%), Gaps = 46/274 (16%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             VR+VSWN                    ++D      + + LDAD+  LQE        
Sbjct: 111 GAVRVVSWNTQH--------------WCQSTDPEPFYAFLRGLDADVYLLQEYHHDEF-- 154

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                +        ER +  +       I   +    +   V                  
Sbjct: 155 -----DGTYRLIDDERRLRETFPGHRAVIARGLITLSRLPVVATVETAARRTLRVDLEMP 209

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +     ++   I V    +               +           +  +      
Sbjct: 210 GDGRILATFNVH---IPVQLRLISPLRADFYRAVRTRAADREREY-----RGLLADVAGC 261

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P +IAGDFN                      +             +       +D+ +
Sbjct: 262 PHPALIAGDFNTTAAIGDARRIA----RLGSDAVALAGRLCPTSWQARPGLRWWRLDWVL 317

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
               A                       + LSDH
Sbjct: 318 TTPGARVHR-------------YRFRDPRGLSDH 338


>gi|218512836|ref|ZP_03509676.1| Endonuclease/exonuclease/phosphatase [Rhizobium etli 8C-3]
          Length = 186

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 43/187 (22%), Gaps = 23/187 (12%)

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
                 + +   +    A         R A  + V  +     +   H+         + 
Sbjct: 22  SHSVIAQAIDFVHGSFSAAGWGEHPRPRNAHCIRVFSHANASAITIAHMH-----GLRDP 76

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
                     +QA  L   + +        V+ GDFN   +        +  +       
Sbjct: 77  AGKGDTPAREEQALALAGLVERVWPGSEGLVVCGDFNVLPDS-----ATFNILARMGLSD 131

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                       +  L+     DY ++                 +           +SDH
Sbjct: 132 LVTGNGLVDTRTSYYLKQGRFADYMLVTPE---------VKVARFEVVATPE----VSDH 178

Query: 296 CPISIDY 302
             + +D 
Sbjct: 179 RALLLDI 185


>gi|289761021|ref|ZP_06520399.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|289708527|gb|EFD72543.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
          Length = 375

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 89/299 (29%), Gaps = 31/299 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           VF     T +++    ++++NI  L      ++           +   ++  K L+A  V
Sbjct: 96  VFVGNTPTDTISGDFSMLTYNIAGLPFPLSSAILP--------RFFYTKEIGKRLNAYYV 147

Query: 70  F-LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             +QE   +     +  K+        E                      K  R+ +Q++
Sbjct: 148 ANVQE--DFAYHQFLIKKSKMPSQTPPEPPTLLWPIGVPFSDGLNTLSEFKVQRLDRQTW 205

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               + +  +  G       +    G  + V ++H  +     +  N             
Sbjct: 206 YECTSDNCLTLKG--FTYSQMRLPGGDTVDVYNLHTNTGGGPTTNAN------------L 251

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             + ++I Q   +    ++ GDFN + +   +    +  ++         +   +     
Sbjct: 252 AQVANYIQQN-SAGRAVIVTGDFNARYSDDQSALLQFAQVNGLTDAWVQVEHGPTTPPFA 310

Query: 249 KNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      +D           L   S+           S+G+ LSDH P  + + +
Sbjct: 311 PTCMVGNECELLDKIFYRSGQGVTLQAVSYGNEAPK--FFNSKGEPLSDHSPAVVGFHY 367


>gi|148998256|ref|ZP_01825725.1| hypothetical protein CGSSp11BS70_03611 [Streptococcus pneumoniae
           SP11-BS70]
 gi|149021544|ref|ZP_01835599.1| hypothetical protein CGSSp23BS72_06749 [Streptococcus pneumoniae
           SP23-BS72]
 gi|168482818|ref|ZP_02707770.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae CDC1873-00]
 gi|168576517|ref|ZP_02722391.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae MLV-016]
 gi|307067202|ref|YP_003876168.1| hypothetical protein SPAP_0573 [Streptococcus pneumoniae AP200]
 gi|147755899|gb|EDK62943.1| hypothetical protein CGSSp11BS70_03611 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147930240|gb|EDK81225.1| hypothetical protein CGSSp23BS72_06749 [Streptococcus pneumoniae
           SP23-BS72]
 gi|172043818|gb|EDT51864.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae CDC1873-00]
 gi|183577748|gb|EDT98276.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae MLV-016]
 gi|306408739|gb|ADM84166.1| hypothetical protein SPAP_0573 [Streptococcus pneumoniae AP200]
          Length = 333

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNVLPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NTTIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|298204349|gb|ADI61823.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 997

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 80/301 (26%), Gaps = 77/301 (25%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A +  L +WN+ TL+                + + +L Q      AD+  LQE+      
Sbjct: 24  ANEFSLCTWNVRTLNRP--------------AAFQVLCQQLTQHRADVTALQEI--RWVG 67

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             V  +  +  +YS     +           T   V K+   ++    P+     S    
Sbjct: 68  QGVVKRADYTAYYSCHPKHHLFG--------TGFVVGKRLQPLIIDFQPINERMCS---- 115

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                  + ++   +   ++++H  +       +  +                 +  K  
Sbjct: 116 -------IRIKGKFQNYTIINVHAPTEESAPEEKEKWYYDVES-----------VYSKAP 157

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI---------------------RFPK 239
                VI GD N KI               +++                          K
Sbjct: 158 KGDVKVIIGDLNAKIGREEVYRPTIGLHSLHETSNDNGTRLIDLASSLNMAIGSTCFPHK 217

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                   + +   +  ID+ ++D+  Y  L+                     SDH  + 
Sbjct: 218 NIHKVTWFSADGVTRNQIDHILIDRRHYSNLLDV----------RSHRGANIDSDHYLVV 267

Query: 300 I 300
            
Sbjct: 268 C 268


>gi|219112079|ref|XP_002177791.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410676|gb|EEC50605.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 580

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 75/263 (28%), Gaps = 24/263 (9%)

Query: 26  LVSWNINTLSE-----QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++SWN+  LS                  +       L ++ +   ADI  LQE       
Sbjct: 3   ILSWNVAGLSTTVNRIHSSYDSPAPKGTKRQPTSAALARFLELHGADIACLQEHKIPKQQ 62

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                +   C   +          D+N      +    K   VL+     LG+ D  ++ 
Sbjct: 63  LSSKSEPRHCSNVTGYESFWSCCVDNNKKGLNGVVTYAKQGSVLRADAAPLGSPDLDAQG 122

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                    V  +     + ++++ +               +   +    L+  + ++++
Sbjct: 123 R-------CVMTDHGTFVLFNVYVPASGGQP---------LAFKMKFLNALRRSMRKQRQ 166

Query: 201 SLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPID 258
               P V+ GD N             + +  ++ L    +          +   +   I+
Sbjct: 167 EKQKPVVLVGDLNIAHTEKDIF-WKDRVVHVDEVLDVVAESGCDLPRWKVELAEHWPKIE 225

Query: 259 YFVMDQNAYKFLIQESFSEILYN 281
             +  +         S +   Y+
Sbjct: 226 QVLESKEVVPKQTSNSMTGEKYD 248


>gi|256264341|ref|ZP_05466873.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2
           str. 63/9]
 gi|263094615|gb|EEZ18413.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2
           str. 63/9]
 gi|326408648|gb|ADZ65713.1| Endonuclease/exonuclease/phosphatase family [Brucella melitensis
           M28]
 gi|326538369|gb|ADZ86584.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 322

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 114 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 163

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 164 AILSRRPFIADSAPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 209

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 210 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 252

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 253 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 303

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 304 HLPVLVEFS 312


>gi|2072958|gb|AAC51267.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 72/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N   ++    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLHRSTRQKVNKDTQELNSALYQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|311276311|ref|XP_003135148.1| PREDICTED: synaptojanin-2-like [Sus scrofa]
          Length = 1653

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 85/339 (25%), Gaps = 68/339 (20%)

Query: 23   KVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEM 74
             VR+   +WN+N   +     L    +     D   L       D    ADI  V  +EM
Sbjct: 704  PVRVAVGTWNVNGGKQFRSNLLGTAELADWLLDAPALSGVTGPQDDSSPADIFAVGFEEM 763

Query: 75   GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQ 126
               +A   V    T    +        S+      + +A        I VR  +V  ++ 
Sbjct: 764  VELSAGNIVNASTTNRKMWGERLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRD 823

Query: 127  SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                        +AGN+ AV +  + +      +  HL +        N      +    
Sbjct: 824  VAIDTVKTGMGGKAGNKGAVAIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREIT---- 879

Query: 187  QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DP 230
              Q L   + +   S       GDFN +I+              WK +            
Sbjct: 880  --QKLSFPMGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSS 937

Query: 231  NDSLIRFPKEKDSRCNANK------------------------NLRNKIPIDYF-----V 261
                  F +         K                          + + P D       +
Sbjct: 938  GKIFKDFHEGTIDFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWKKRHPFDKTAGELNL 997

Query: 262  MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +D                           + SDH P+  
Sbjct: 998  LDNGLDADPKVRHAW-SPGTLKYYGRAELQASDHRPVLA 1035


>gi|290972380|ref|XP_002668931.1| predicted protein [Naegleria gruberi]
 gi|284082469|gb|EFC36187.1| predicted protein [Naegleria gruberi]
          Length = 236

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 63/207 (30%), Gaps = 28/207 (13%)

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
             + + +  ++  +  ++Y    A  +      +  +  L++    +    D  +     
Sbjct: 45  QDSGLLLLTRHEILESENYIFQYASYTEYIVA-KGILYALIKKKKNEEGDADYLMIFSVH 103

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE----------SLVPFVIAGDFN-RKINYL 218
           +D+ ++          +Q + L  ++  K +            V  VI GD+N   ++  
Sbjct: 104 MDAHKDRS------RREQIKELVQFVNDKIDNFRNHYQIDFENVRVVICGDYNIDSLHSN 157

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQESFSE 277
            +      ++        F  +                 +D+  +  N        SF  
Sbjct: 158 DSYAYLKNSMSSLGLKNVFGDDTSRHPVTYPIPTFNNWCLDHVFISNNCK-----HSFDI 212

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304
           I +  +D       +SDH  +     F
Sbjct: 213 IRWKNEDGIE----VSDHYGVRTTIHF 235


>gi|166713110|ref|ZP_02244317.1| hypothetical protein Xoryp_17105 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 410

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/379 (11%), Positives = 89/379 (23%), Gaps = 103/379 (27%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             A  +R+ ++N +  S++ G  + +       +    +    + +  D+V L E   ++
Sbjct: 35  PAAATLRIATYNTSLYSDEAGGLIRELQGDSAHAR--KIAAVLQRVRPDLVLLNEF-DFD 91

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNND----------------------------- 109
              +             +     + R                                  
Sbjct: 92  PEHRAADLFQQRYLQVAQPGGGEALRYPYRYLAPVNTGVPSGLDLDNNGSIGGEGRARGN 151

Query: 110 ---------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------AVEL 148
                        + V  +     Q        K S      R             A+  
Sbjct: 152 DAWGYGLHPGQYGMLVLSRYPIDAQAVRSFQLLKWSALPGALRPIDPASKTSYYSDAIWA 211

Query: 149 LVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----- 191
            + ++ K             +  L  H     F  + +   + +   L     +L     
Sbjct: 212 QLRLSSKSHWDVPVHTRLGVVHALVSHPTPPVFDGAEKRNAARNHDELQLWRAYLDNAPE 271

Query: 192 -KDWITQKK------ESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            + W+   K      +S   FVI GD N    +  G++      I+    L       + 
Sbjct: 272 SQRWLCDDKGSCGGLDSDARFVILGDLNNDPVDGAGHHAAIRALINHPRVLQYPTPRSEG 331

Query: 244 R---------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                                           + +DY +        +    F       
Sbjct: 332 GPEKTAEYAALGIAHSGDPHQVTGDFGPQAGTMRLDYVLPSHQFT-LIGSGIFWPASSAP 390

Query: 283 DDIKSRGKRLSDHCPISID 301
           +   + G   SDH  + +D
Sbjct: 391 EAAIADG---SDHHAVWVD 406


>gi|62289584|ref|YP_221377.1| AP endonuclease domain-containing protein [Brucella abortus bv. 1
           str. 9-941]
 gi|82699514|ref|YP_414088.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis biovar Abortus 2308]
 gi|189023843|ref|YP_001934611.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19]
 gi|254688905|ref|ZP_05152159.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 6 str. 870]
 gi|254693386|ref|ZP_05155214.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 3 str. Tulya]
 gi|254697037|ref|ZP_05158865.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254729936|ref|ZP_05188514.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 4 str. 292]
 gi|256113160|ref|ZP_05454037.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|256257153|ref|ZP_05462689.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 9 str. C68]
 gi|260545655|ref|ZP_05821396.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus NCTC 8038]
 gi|62195716|gb|AAX74016.1| AP endonuclease family 1 domain protein [Brucella abortus bv. 1
           str. 9-941]
 gi|82615615|emb|CAJ10602.1| Endonuclease/exonuclease/phosphatase family [Brucella melitensis
           biovar Abortus 2308]
 gi|189019415|gb|ACD72137.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19]
 gi|260097062|gb|EEW80937.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus NCTC 8038]
          Length = 322

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 114 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 163

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 164 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 209

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 210 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 252

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 253 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 303

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 304 HLPVLVEFS 312


>gi|239792809|dbj|BAH72703.1| ACYPI007473 [Acyrthosiphon pisum]
          Length = 175

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/179 (10%), Positives = 44/179 (24%), Gaps = 43/179 (24%)

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
           ++E   ++ +++  ++ +                   +  + L        ++  P V+ 
Sbjct: 15  VIEAEYEQFFLVSTYIPNAGAGLKTLPKRMKWDEAFRKYLKEL--------DTKKPVVLT 66

Query: 209 GDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           GD N                         D    +     +  F      +  A      
Sbjct: 67  GDLNVAHEEIDIANPKTNTKSAGFTKEERDNMSLLLEQGFVDTFRTLNPEKTGAYTFWTY 126

Query: 254 ---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                       +DYF+  +     +   +    +             SDHCPI    +
Sbjct: 127 FHNSRAKNVGWRLDYFITSKRFMDNVCDSTIRNEVL-----------GSDHCPIVFYIN 174


>gi|218679478|ref|ZP_03527375.1| putative phosphatase protein [Rhizobium etli CIAT 894]
          Length = 162

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 42/182 (23%), Gaps = 52/182 (28%)

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL------- 202
           +   G  I V  +HL                      Q Q+L   I    +         
Sbjct: 2   IAAPGGAIRVYSLHLDHVSPD------------ERIHQLQFLNAHINAFVQEGGSLTGGG 49

Query: 203 ----------VPFVIAGDFNRKINYLGN-------NDDFWKTIDPNDSLIRFPKEKDSRC 245
                       +++ GDFN +                + +       +  F      R 
Sbjct: 50  ELDLPEPPLPEDYLVMGDFNMEPESPEYCALAGAGGGYYGRITRIGTPIDAFAALDAYRP 109

Query: 246 NANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++           ++ +DY  +       L                      SDH P+ +
Sbjct: 110 DSYSWMNPEDHSERMHLDYCFVSCGLKDRLKSARI-----------DTQSVGSDHFPLWV 158

Query: 301 DY 302
           + 
Sbjct: 159 EI 160


>gi|146420885|ref|XP_001486395.1| hypothetical protein PGUG_02066 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 444

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 61/213 (28%), Gaps = 15/213 (7%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
                +++++S+N    S           +  +  +   +L    K  DADI+ LQE+  
Sbjct: 59  PPSPLRLKIMSYNTLAQSLVRRTLFPTSGNALKWATRSKVLTSELKYYDADIMCLQEVDE 118

Query: 77  ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +   +   +  +   +       H    +      +     + +   ++    L +
Sbjct: 119 VQFESYWKEKLKELGYEYKFERAYTKRHGIVIAFKPQLVSSTY-SRVINYDREDAGFLSS 177

Query: 134 KDSFSRAGNRRAVELLVEINGK------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           + +    G    +    E   K       I +   HL             S    L + Q
Sbjct: 178 QTTTDNLGLVTCLSFTKETREKYPQLKSGIVIATTHLFWHPMGTYERARQSFLLMLRTIQ 237

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
              +         +     +AGDFN +      
Sbjct: 238 FAMML----GGSPNSFYHFMAGDFNTQPFDFPY 266


>gi|260761435|ref|ZP_05873778.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260671867|gb|EEX58688.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 366

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 158 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 207

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 208 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 253

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 254 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 296

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 297 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 347

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 348 HLPVLVEFS 356


>gi|212637146|ref|YP_002313671.1| extracellular nuclease [Shewanella piezotolerans WP3]
 gi|212558630|gb|ACJ31084.1| Extracellular nuclease, putative [Shewanella piezotolerans WP3]
          Length = 1087

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/410 (11%), Positives = 104/410 (25%), Gaps = 132/410 (32%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQEMG 75
           +R+ S N+             N  +   +D         T L +  +  DAD++ L E+ 
Sbjct: 527 IRISSQNLFNFFNSPFGGDNNNFGQSRGADSYDEYINQRTKLVEIIRAQDADVMALMEIE 586

Query: 76  -----SYNAVAKVFPKNTWCIF-----------------------YSTERLINHSKRDSN 107
                  +A+A++  +                              +  +++++     +
Sbjct: 587 NNGFGDASAIAEIVNQVNVQYVDERAQDYNGPNSTENRYVFVGFDNNGNQMLDNLDAIGS 646

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKD--------------------SFSRAGNRRAVE 147
           + I T I  R   + + +     +  +                        +  +R A+ 
Sbjct: 647 DAIATGIIYRPSKMSIERTRVIPMPQQKAPTIVNDLGEVIKDQNQEILENGQNYHRDALV 706

Query: 148 LLVEIN--GKKIWVLDIHLKSFCFL-------------------DSLENTYSPSCSLLSQ 186
           +   +N  GK++ +   HLKS                        + +  Y  SC+    
Sbjct: 707 VTFIVNQTGKRLTLAVNHLKSKGSTCWEEWQGVEFGNATTWNNRTAPDLDYQGSCAEFRV 766

Query: 187 Q-AQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------------NNDD 223
             A  L + +          +I GD N                                 
Sbjct: 767 AGAVHLGEEMEDVLGDK---IILGDLNAYGKEDPVLVLTENPRNKTIVTASHTFLGPKPQ 823

Query: 224 FWKTIDPNDSLIRF---------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
           F +   P      +          ++      +         +D+ ++  +    +I  +
Sbjct: 824 FNEDGSPATITKTYGYIDIVGEKFEDNGKTPWSYSFSDEIGSLDHILISPSLKDRVIDAT 883

Query: 275 FSEILYNEDDIKSRG--------------------KRLSDHCPISIDYDF 304
              +   E  +                         R SDH P  I   +
Sbjct: 884 DWHVNAAETGLYDYQNRFKGSIDGTGTHKFYKADIYRASDHDPALITLSY 933


>gi|24642561|ref|NP_573135.1| CG9784 [Drosophila melanogaster]
 gi|7293245|gb|AAF48627.1| CG9784 [Drosophila melanogaster]
 gi|21430862|gb|AAM51109.1| SD21513p [Drosophila melanogaster]
          Length = 508

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 84/316 (26%), Gaps = 48/316 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSY--NAVA 81
           +V+WN+   S        ++ +           +       DI  + LQE+ +     V 
Sbjct: 35  VVTWNV--GSRFPDNISLRHLLGLQDVTVDKDTKETNAHLPDIYALGLQEVNAQPQQQVL 92

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSF 137
            +F ++ W    + E L N+       +    +     VR+++V  LQ            
Sbjct: 93  GLFKEDPW-THKAKELLRNYDYVAVKTEQMQGLLLSMFVRRQHVEHLQDIEAEFTRTGFG 151

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLK-SFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              GN+ AV +   + G  +  +  HL      +D     Y           +  ++   
Sbjct: 152 GIWGNKGAVSVRFTLYGCGLAFVVAHLTAHDHMMDERIEDYKQILENHHYHVKRYREIYD 211

Query: 197 QKKESLVPFVIAGDFNRKINYLGNN-----------------------------DDFWKT 227
                       GD N ++    ++                                ++ 
Sbjct: 212 H-----DYVFWFGDLNFRLQGSDSSTEVRELVRDESQHEALIQRDQLYQVREKSQLAFQV 266

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +           +     +     R     D  +          Q      +        
Sbjct: 267 LQERLPAFPPTFKFREGTSEYDLKRRPAWTDRIMY--AVQPLNRQPGMQLSIEQCSYKSH 324

Query: 288 RGKRLSDHCPISIDYD 303
               +SDH P++ D+ 
Sbjct: 325 PLYTISDHKPVTSDFT 340


>gi|327284457|ref|XP_003226954.1| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase-like
           [Anolis carolinensis]
          Length = 867

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 76/313 (24%), Gaps = 65/313 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + S+N+N  S +E +  W +                     D+  V  QE+         
Sbjct: 219 VGSYNVNGQSPKENLQPWLSQDPDP---------------PDVYCVGFQELDLSKEAFFF 263

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    +                   I     VR +    + +          
Sbjct: 264 NDTPKEEEWFRAVTESLHPGAKYAKIKLVRLVGILLLLYVRTELAANISEVEAETVGTGI 323

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I +++ HL +        N      S      Q       
Sbjct: 324 MGRMGNKGGVGIRFKLHNTSICLVNAHLAAHAEECERRNQDFRDISARMLFGQLESGLPA 383

Query: 197 QKKESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDP 230
                    +  GD N ++                                   ++    
Sbjct: 384 LTIAKHDVVLWLGDLNYRLEEQDVERVKKLVEARDFRTLQQHDQLKRQMEAKAVFEGFTE 443

Query: 231 NDSLIRFPKEKDSRCNANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +   +   + +  CN        R     D  +            S S++ Y       
Sbjct: 444 GEITFQPTYKYNPGCNDWDTSEKCRVPAWCDRIL--------FKGRSVSQLSYRSH---- 491

Query: 288 RGKRLSDHCPISI 300
              ++SDH P+S 
Sbjct: 492 PALKISDHKPVSA 504


>gi|303232620|ref|ZP_07319305.1| endonuclease/exonuclease/phosphatase family protein [Atopobium
           vaginae PB189-T1-4]
 gi|302481106|gb|EFL44181.1| endonuclease/exonuclease/phosphatase family protein [Atopobium
           vaginae PB189-T1-4]
          Length = 601

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/277 (9%), Positives = 74/277 (26%), Gaps = 45/277 (16%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
              +R        D +  QE+   +  +    +         +++ +       ++ H+ 
Sbjct: 337 LETIRTSNNGKTPDFLLFQEIDVQSDRSYQINQ-----VEEAKKMFSSYNSTFASNFHSG 391

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH---------L 164
             +   +         LL           R +  +  +   K   +              
Sbjct: 392 FLIYPLHDMHGAVQSGLLSMSAIDITNATRYSYPVSTKFPDKFFDLDRCFQVTRYRTPDN 451

Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224
                ++S  + Y  +    ++Q + L +++T+++      +  GD+N  +    +    
Sbjct: 452 HELVMINSHMSAYDANGEYRAKQLKVLNNFLTEERAKGNYVIAGGDWNHALGGSISAYPS 511

Query: 225 WKT-------IDPNDSLIRFPKEKDSRCNANKNLR-----------NKIPIDYFVMDQNA 266
            +        ++ +D    F        +     R               +D F++  N 
Sbjct: 512 QQQIPSWVAELNDSDLAEGFRYVAPDNLSDTPTCRGDDIPYQKGVTYTTTVDGFMVSDNI 571

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                                     SDH P+ + + 
Sbjct: 572 DAHATN-------------IDTEFASSDHNPVLLRFT 595


>gi|93006524|ref|YP_580961.1| endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis
           K5]
 gi|92394202|gb|ABE75477.1| Endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis
           K5]
          Length = 373

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/255 (10%), Positives = 57/255 (22%), Gaps = 45/255 (17%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
           T  D   L +  +    DI+   E               W                   D
Sbjct: 119 TNDDTYKLVELVQQKQPDILITLESD-----------EKWEKALDQVESDYPYTVKVPLD 167

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               + +  K   +  +   L+              +   +++ G ++  L         
Sbjct: 168 NLYGMHLYSKLELIDPEIKYLIIDDIPS--------IHTQIQLQGGRVIWLYCLHPMPPS 219

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
               + + +            L       K++    ++AGD N            ++ I 
Sbjct: 220 PTEADKSTTRD--------AELLMVGKHIKDNKQTAILAGDLNDVAWSQTTRR--FQRIS 269

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
               L                   +  +D+                    +   DI+   
Sbjct: 270 --GLLDPRIGRHFINTFHVNYPFLRWALDHLFHSA--------------CFTVIDIERLP 313

Query: 290 KRLSDHCPISIDYDF 304
              SDH P+     +
Sbjct: 314 SIGSDHFPVMTTLQY 328


>gi|2072953|gb|AAC51264.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 69/292 (23%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKHKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+ +  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNTYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +           PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIGIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|323307865|gb|EGA61126.1| Ngl3p [Saccharomyces cerevisiae FostersO]
          Length = 506

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 65/221 (29%), Gaps = 9/221 (4%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +  V+++++N    TL  ++          +      +L    K    D+V LQE+
Sbjct: 102 VTQDSLDVKIMTYNTLAQTLIRRD-FFPESGPALKWHKRSKVLVXELKKYRPDVVSLQEV 160

Query: 75  GSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
                N   + F K  + + +       H    + N+    +            +  ++ 
Sbjct: 161 DYNELNFWQENFHKLGFDMIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVIS 220

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A+          ++      +     ++  +   F     +      S  +     Q ++
Sbjct: 221 ARTRTKNIALIISLYFKGITDSSSRGIIVANTHLFWHPFGVFERLRQSYLV----LQKIQ 276

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           +     K +    ++ GDFN +           + +     
Sbjct: 277 EIKACSKYNGWHSLLMGDFNTEPEEPPYLAITKRPLILKGP 317


>gi|320591538|gb|EFX03977.1| hypothetical protein CMQ_905 [Grosmannia clavigera kw1407]
          Length = 386

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 74/265 (27%), Gaps = 19/265 (7%)

Query: 16  CTASVAQKVRLVSWNINTLSE---QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
              ++A ++ LV+WN++  S         +                  A     DI+FLQ
Sbjct: 51  PATTIASELTLVTWNVDAFSPQSEDRLAGILDAVRGSGGGGSAFSAAVATPTHPDILFLQ 110

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+ S + +A +         +           D N     ++  R+        S     
Sbjct: 111 EV-SPSGLAYLLQDPWVRCHWYVSDTGAAQPSDPNGFSIVSLVSRRFLPEHWSSSSSSSR 169

Query: 133 AKD----------SFSRAGNRRAVELLVEINGKK---IWVLDIHLKSFCFLDSLENTYSP 179
                         F     R A+   + +       + ++++HL S     S       
Sbjct: 170 TAGIPVLGALWRIDFPSLFGRYAICCEIRMPDPTAAVVRLVNVHLDSLQIRPSRRPRQLQ 229

Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             +  L  QQ +      T         ++AGDFN  +    N       +      +  
Sbjct: 230 IVADMLHCQQPRSTSAVATATSAMAAHGLVAGDFNPVLPEEDNLLVAANGLVDAWQHLHP 289

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVM 262
            +   +     +       +D   +
Sbjct: 290 DESGVTWGIDGQQPYPPARLDKVAV 314


>gi|237815081|ref|ZP_04594079.1| AP endonuclease domain-containing protein [Brucella abortus str.
           2308 A]
 gi|260754390|ref|ZP_05866738.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str.
           870]
 gi|260883415|ref|ZP_05895029.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str.
           C68]
 gi|297247999|ref|ZP_06931717.1| AP endonuclease domain-containing protein [Brucella abortus bv. 5
           str. B3196]
 gi|237789918|gb|EEP64128.1| AP endonuclease domain-containing protein [Brucella abortus str.
           2308 A]
 gi|260674498|gb|EEX61319.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str.
           870]
 gi|260872943|gb|EEX80012.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str.
           C68]
 gi|297175168|gb|EFH34515.1| AP endonuclease domain-containing protein [Brucella abortus bv. 5
           str. B3196]
          Length = 357

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 149 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 198

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 199 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 244

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 245 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 287

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 288 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 338

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 339 HLPVLVEFS 347


>gi|26333609|dbj|BAC30522.1| unnamed protein product [Mus musculus]
 gi|123223482|emb|CAM21424.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
 gi|123230063|emb|CAM15343.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 266

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 61/211 (28%), Gaps = 30/211 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 2   LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57

Query: 81  -AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136
              +         +S  R           D  T +A           L       G  D 
Sbjct: 58  PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDE 117

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                 +E   K + +++++                    LL
Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
             +A+ L         +    +I GD N   
Sbjct: 178 QMRAEALLA-------AGSHVIILGDLNTAH 201


>gi|332141744|ref|YP_004427482.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327551766|gb|AEA98484.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 325

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/283 (11%), Positives = 70/283 (24%), Gaps = 62/283 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + ++S N+   +                 D+  L ++ +N   D +   E        
Sbjct: 102 DTLSVLSSNVYMPNN----------------DFRKLIEHVRNKQPDFLVTLE-------- 137

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  W    S        ++    +    + +  K          L+       +  
Sbjct: 138 ---SNEKWQKGISEIESEYPYRKFCALENLYGMHLYSKIPFEEATLNFLIEDDVPSMK-- 192

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 + ++  GK   +  +H K     ++                  L     +  ++
Sbjct: 193 ------VKIKHKGKDALLYFLHPKPPSPTENTYAKPRDI---------ELTVVGEEIAKT 237

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++AGD N                  +  L              K    K P+D+  
Sbjct: 238 EGPIIVAGDLNDVAWSPTTRKFK----KISGLLDPREGRGFYNTFHAKYPLVKWPLDHVF 293

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             ++              +    I+      SDH P+  +  F
Sbjct: 294 HSRH--------------FALVHIEKLEGIGSDHYPLYTELAF 322


>gi|328958120|ref|YP_004375506.1| endonuclease/exonuclease/phosphatase [Carnobacterium sp. 17-4]
 gi|328674444|gb|AEB30490.1| endonuclease/exonuclease/phosphatase [Carnobacterium sp. 17-4]
          Length = 278

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 67/281 (23%), Gaps = 59/281 (20%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST---------------- 95
                L +   +   D++  QE+      A +   + +    +                 
Sbjct: 18  DKLDTLVKTILSHQFDVIAFQEINQPIDEAVLDLSDQFAYQAADPTVQIKRNNFAFLVQQ 77

Query: 96  --------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
                               +     +A    +     +++       +F     R  + 
Sbjct: 78  KLEQAGLRYTWTWQPAHVGYDIYDEGLAFLSLHPIKEIKTF-YASKSRAFDNYKTRPVLG 136

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           +L+E +    W  ++HL  +   D         CS + +                 P  +
Sbjct: 137 VLIEDS----WYFNLHLGWWDDKDDSFKEQWAVCSTVFKMLAE-------------PIYL 179

Query: 208 AGDFNRKINYLGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            GDFN               D F            +  EK    +       K+ ID+  
Sbjct: 180 MGDFNNPAQMTNEGYDLVTRDWFDTFHLAEKRDKGYTVEK--NIDGWAENNEKLRIDFIF 237

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                        F              + +SDH  +SI  
Sbjct: 238 ---------TNHPFEVDSSKVFFNGKNNQIISDHYGVSIKL 269


>gi|262369974|ref|ZP_06063301.1| endonuclease/Exonuclease/phosphatase [Acinetobacter johnsonii
           SH046]
 gi|262315013|gb|EEY96053.1| endonuclease/Exonuclease/phosphatase [Acinetobacter johnsonii
           SH046]
          Length = 369

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/250 (10%), Positives = 62/250 (24%), Gaps = 45/250 (18%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
            Y LL Q  +    D++   E  +            W    S        +     D   
Sbjct: 115 QYHLLLQQIRKHQPDLILTLESDAD-----------WEQALSVLEDDYPYRVAVPLDNLY 163

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + +  +          +L  +              ++  +G+ + +  +H K     ++
Sbjct: 164 GMHLYSRLALKDIDVKFILSDEIPSIH-------ATVILRSGQPVQLYCLHPKPPSPTEA 216

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            ++T   +          L     Q K+     ++ GD N            ++ I    
Sbjct: 217 KDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS--G 263

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                   +  +D+                    +    ++      
Sbjct: 264 LLDPRVGRHFVNTFHADYPLLRWSLDHVFHS--------------TDFALVQMQRLPHIG 309

Query: 293 SDHCPISIDY 302
           SDH P+ +  
Sbjct: 310 SDHFPVYVVL 319


>gi|325293601|ref|YP_004279465.1| hypothetical protein AGROH133_07791 [Agrobacterium sp. H13-3]
 gi|325061454|gb|ADY65145.1| hypothetical protein AGROH133_07791 [Agrobacterium sp. H13-3]
          Length = 310

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 76/292 (26%), Gaps = 67/292 (22%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F      A  A+  RL+S+N+   +     ++                      DAD V+
Sbjct: 82  FSTSANAAPGARPFRLLSFNVLMDNAANADAIADR---------------ILESDADAVY 126

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           L E     A+  V P+              H            + +  K   +  + + L
Sbjct: 127 LFEA---AALESVLPRLQQTY--------PHRLGCYAGTPTCDLLILSKRPLLEGRFHSL 175

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              +        R A+   +E +G K+ +   H+    F D                   
Sbjct: 176 SDLRRD------RFAI-ASIEFDGTKLTLAAGHITKPYFDDYHR--------------DE 214

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L +          P ++AGDFN         D                   +      K 
Sbjct: 215 LDEVSEILFRVTGPLILAGDFNSASIAPDMRDFLAANDLKKAPW-------EPATWPTKA 267

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R  I ID+    + A                   +      S+H  +  D+
Sbjct: 268 GRFGIAIDHIFAREPATLL-------------KTTRLPDSLGSNHFGLMADF 306


>gi|254718771|ref|ZP_05180582.1| AP endonuclease domain-containing protein [Brucella sp. 83/13]
 gi|306837488|ref|ZP_07470363.1| AP endonuclease domain-containing protein [Brucella sp. NF 2653]
 gi|306407380|gb|EFM63584.1| AP endonuclease domain-containing protein [Brucella sp. NF 2653]
          Length = 322

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 114 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 163

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 164 AILSRQPFIADSAPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 209

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 210 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 252

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 253 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 303

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 304 HLPVLVEFS 312


>gi|156144636|gb|ABU52967.1| hypothetical protein [Dunaliella viridis]
          Length = 4640

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 78/308 (25%), Gaps = 88/308 (28%)

Query: 23   KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSY 77
             ++L + N+  L+  +                  +RQ     D DI+ L E       + 
Sbjct: 1904 SLKLFTHNVKGLNISQSD----------------MRQALHAHDPDILVLTETKLYDSNNK 1947

Query: 78   NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
              + K+     W           H    +   I T IA   +             AK ++
Sbjct: 1948 PWLNKLLKNYKW-------WSSPHGSAGTLMGIRTGIAGLSQ-------------AKLTY 1987

Query: 138  SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
            +    R  V + +    + + ++  +  S             + +        ++D IT+
Sbjct: 1988 ADQEGR-LVAVTLRSQHQDLIIIGTYWPSGSST--------EAIASRHTMQGKVRDLITE 2038

Query: 198  KKESLVPFVIAGDFNRKI-----------NYLGNNDDFWKTIDPN---DSLIRFPKEKDS 243
                    ++ GD N                      F + ++     +      +  + 
Sbjct: 2039 NHSCTP--LLLGDMNATYYNDDRSSVNVTTADRMYRAFLQEVNLKPLPEHDPGRERVNEP 2096

Query: 244  RCNANKNL-----------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            R     +                 ID  ++ +               Y            
Sbjct: 2097 RPWTYLHPTAVDSTSGNTIYTTSRIDDILLPKQLADIFTSAVTCTNGYR----------- 2145

Query: 293  SDHCPISI 300
            SDH P+  
Sbjct: 2146 SDHIPLVA 2153


>gi|20071198|gb|AAH26769.1| Apex2 protein [Mus musculus]
          Length = 246

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 61/211 (28%), Gaps = 30/211 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 2   LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57

Query: 81  -AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136
              +         +S  R           D  T +A           L       G  D 
Sbjct: 58  PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDE 117

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                 +E   K + +++++                    LL
Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
             +A+ L         +    +I GD N   
Sbjct: 178 QMRAEALLA-------AGSHVIILGDLNTAH 201


>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
 gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
          Length = 1230

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 79/328 (24%), Gaps = 70/328 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEMGSYNAV 80
           + + + S+N+          +          D +L+R    +   ADI+ LQE+      
Sbjct: 273 ESLAVSSYNV---------LIGTEYPPTHDRDPSLVRTILSDSAMADILVLQEVSDDFLT 323

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +        +        H            I +  +      +S P          A
Sbjct: 324 YLLGDSEVQRRYPFASHGPPHQPDIGPLPSLRNIVILSRYAF-SWKSVPFHRKHKGALVA 382

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R         +G    V  IHL +             + +    Q + L  ++ +   
Sbjct: 383 SFRGISTSSPSASG-TFVVAGIHLTAGLTDG--------AVAAKKSQMKNLTSYLERHHS 433

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFW----------------KTIDPNDSLI--------- 235
           +  P++I GDFN   +    N                      I     L          
Sbjct: 434 TD-PWIITGDFNLVTSIYTLNAALGDKSITEETVDALSSIEAAISDAGLLDAWSVARIEA 492

Query: 236 -----------RFPKEKDSRCNA----------NKNLRNKIPIDYFVMDQNAYKFLIQES 274
                       +  E+ +  +             +       D  +      + ++  +
Sbjct: 493 VDQATPIDGEVLYEGEEGATFDPQNNRLAAGTTTTSHDRPQRYDRILFRP---QGVLGVA 549

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   D +       SDH  +    
Sbjct: 550 RFNHFGLPDVVDGAQIFASDHYGVRAKL 577


>gi|123223481|emb|CAM21423.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 246

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 61/211 (28%), Gaps = 30/211 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 2   LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57

Query: 81  -AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136
              +         +S  R           D  T +A           L       G  D 
Sbjct: 58  PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDE 117

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                 +E   K + +++++                    LL
Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
             +A+ L         +    +I GD N   
Sbjct: 178 QMRAEALLA-------AGSHVIILGDLNTAH 201


>gi|86747585|ref|YP_484081.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodopseudomonas palustris HaA2]
 gi|86570613|gb|ABD05170.1| endonuclease/exonuclease/phosphatase family [Rhodopseudomonas
           palustris HaA2]
          Length = 380

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 74/298 (24%), Gaps = 36/298 (12%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKVF 84
           L +WNI                 R       + +       D+V +QE+     A+ +V 
Sbjct: 49  LATWNIREFGGN-------KFRGRIDDALYCIAECISRF--DLVAVQEVRQDLVALKRVM 99

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                   Y    +      +           R +   +  +      A         R 
Sbjct: 100 RLLGRDWDYIYTDVSFADAGNGERLAFVFNRSRVRFTGLAGELVLPSKAATELVAQIART 159

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-- 202
                 +    K  +  +H+                       A   K ++  +  +   
Sbjct: 160 PFLCGFQSGWAKFNLCTVHIYYGEGKKDDPKRIEEIDLTAKLLADKAKSYVNLETSADYS 219

Query: 203 -VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF- 260
               V+ GDFN      G  D  ++ +  N  +I  P  + ++ +     +     D   
Sbjct: 220 PENLVLLGDFNIF----GREDATFQALTENKFVIPEPLLRQTKGSNVAQDKF---YDQIA 272

Query: 261 VMDQNAYKFLIQESF---------------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +      I                     +         R  ++SDH  +  ++D
Sbjct: 273 FFKETRGIKAISAGVFDFYKYVFNDPKLYKDVMPPKAAFNTWRTYQMSDHLIMWTEFD 330


>gi|53715258|ref|YP_101250.1| hypothetical protein BF3974 [Bacteroides fragilis YCH46]
 gi|52218123|dbj|BAD50716.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 678

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 76/308 (24%), Gaps = 54/308 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  V+++ WNI       G                 +    ++  AD++ +QE  
Sbjct: 403 NNQTQSNIVKVLQWNIWHGGIHLGNEGQ-----------QRVLDLIRSSRADVIMMQEAY 451

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  +     + +     R +  +    +     AIA R+       +     G + 
Sbjct: 452 GIQ--QMLADSLGYHL---KTRSLKDNLAMYSRFPLEAIAWREPFKSNPAKITLPNGKRI 506

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            F     R A          +             LD        S   L          I
Sbjct: 507 MFVDCWLRYAYRPEYTSGYAE-----------KGLDPSVWVAEDSILALPDIRNIYTKDI 555

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKD 242
               E+ +P ++ GDFN   +                      + +  N     F ++  
Sbjct: 556 APNLETDMPVIVTGDFNSCSHLDWTERAKPLHHGYGPVAFPASRYMLENGFKDSFREKNP 615

Query: 243 ------SRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                     A    +     ID+          ++           D +       SDH
Sbjct: 616 DEIAYQGGTVAAIYGQMQMSRIDFIYYKGGL--KVLSSKIVRTAPEIDYV-----WASDH 668

Query: 296 CPISIDYD 303
             +   ++
Sbjct: 669 AAVLTVFE 676


>gi|312210206|emb|CBX90293.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1283

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 83/305 (27%), Gaps = 40/305 (13%)

Query: 26  LVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQY----AKNLDADIVFLQEMGSYNA 79
           + ++N+N         +S W       +     +          L    +   +     A
Sbjct: 627 VGTFNLNGKTSGLNTDLSPWLCPDVDPSQQCPEIVAVGFQEIVELSPQQIMSTDPDRREA 686

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKD 135
             K   K   C+ ++ E+                    + +R  +++ ++     L    
Sbjct: 687 WEKAVKK---CLNHNAEKYGKDEYVILRGGQLVGASLSVFIRSDHLKHVKNVEGSLKKTG 743

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
               AGN+ AV +  E     I  +  HL +        N    + S        L+   
Sbjct: 744 MSGMAGNKGAVAIRFEYANTSICFVTAHLAAGFANYEERNRDYKTISHG------LRFQR 797

Query: 196 TQKKESLVPFVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPK 239
            +  E     +  GDFN +I                    +ND     +    +   + +
Sbjct: 798 NRSIEDHDSVIWLGDFNYRIGLSNDKVQRLCHVGDLETLYDNDQLNLQMVAGLTFPYYSE 857

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            + +     K   N    D     +      +  +         +    +   R SDH P
Sbjct: 858 ARITFPPTYKYDLNSDQYD---TSEKARIPAWCDRVLRKGDNIRQIHYDAAPLRFSDHRP 914

Query: 298 ISIDY 302
           +   +
Sbjct: 915 VYATF 919


>gi|265983749|ref|ZP_06096484.1| LOW QUALITY PROTEIN: endonuclease/exonuclease/phosphatase [Brucella
           sp. 83/13]
 gi|264662341|gb|EEZ32602.1| LOW QUALITY PROTEIN: endonuclease/exonuclease/phosphatase [Brucella
           sp. 83/13]
          Length = 361

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 153 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 202

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 203 AILSRQPFIADSAPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 248

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 249 ----------FQQSEQIEALSEQFRGLSENAILSGDLNATPWSATTKRI-------AELA 291

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 292 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 342

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 343 HLPVLVEFS 351


>gi|169832807|ref|YP_001695419.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|168995309|gb|ACA35921.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae Hungary19A-6]
          Length = 284

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/310 (10%), Positives = 82/310 (26%), Gaps = 56/310 (18%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYN 78
           +K+ + +WNIN           ++   +      ++       ++DIV L E     +++
Sbjct: 2   KKMTVSTWNIN----------QRSGTGKGKQIPEMIVHELAKQNSDIVCLTEYVKGKNHS 51

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              +      + +F   E +           I T      +     ++ +P         
Sbjct: 52  EFCEQLKSLGYSLFMYPEHIKKFQNE-VLIAIKTKFVTLPRITTFPEEEFPDF------- 103

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKD 193
                  + L ++  G  + ++   +K     D+L                  Q +++ +
Sbjct: 104 -------LHLQIDFEGAPLHIIGARIKIADIDDTLPYKRKLPLLVKDAKERLLQIEYITE 156

Query: 194 WITQKKESLVPFVIAGDFNRKI--NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           ++ +   +    ++ GDFN      +   +          +                   
Sbjct: 157 YVRKLNGN---ILLMGDFNNFHYFEHQKIDSWEHDKEFLQNYYSYPLLVAKMTEVNLATY 213

Query: 252 RNKIPID--YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS---------------- 293
                 D  Y  ++       I+          +  +    + S                
Sbjct: 214 SPTGNYDEVYSWINPGTRADNIKRYIRNDHLFSNLTEISDIKYSWEFTKNPKYQNKVGFP 273

Query: 294 DHCPISIDYD 303
           DH  +S    
Sbjct: 274 DHAILSATIS 283


>gi|147788232|emb|CAN71594.1| hypothetical protein VITISV_005028 [Vitis vinifera]
          Length = 363

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 70/280 (25%), Gaps = 55/280 (19%)

Query: 33  TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92
            L+    V+          S   +++ Y +N   D++ +QE         +        F
Sbjct: 12  MLNPIGKVNDEIEMCDEEFSKRKIIKNYIRNQRVDLMCIQETKIQEMSEGIVRSLGSGRF 71

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                L               I +      +                   + ++    + 
Sbjct: 72  LDWRALNAEGAAG-------GILICWDKRVLE-----------ILDWEEGQFSLSCRFKT 113

Query: 153 --NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
             NG       ++                +   L                   P+ + GD
Sbjct: 114 IENGATWVFTGVYDPFTKVEREGMWEELGAIRGLW----------------DDPWCLGGD 157

Query: 211 FNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
           FN  +     +           F +++D  + +    +  +   +   N +    +D F+
Sbjct: 158 FNITLFQHERSSQRRISSAMRRFAESVDDLELVDLPLQGGEFTWSGGLNNQAWARLDRFL 217

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +  +              ++        +  SDH PI ++
Sbjct: 218 VSPS----------WLDQFSGVTQGRLSRPTSDHFPIVLE 247


>gi|32141164|ref|NP_733566.1| hypothetical protein SCO2255 [Streptomyces coelicolor A3(2)]
 gi|24419029|emb|CAD55301.1| putative membrane protein [Streptomyces coelicolor A3(2)]
          Length = 350

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 84/315 (26%), Gaps = 83/315 (26%)

Query: 1   MIRKYVLALVFFLVPCT-------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47
           ++RK   AL+  +VP +                   + + + N+N  +     +    + 
Sbjct: 95  LVRKSATALIALVVPVSVWLNLFGGLLFDKTGSGGDLTVATHNVNADNADPAGTARAVAA 154

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                                  L+E+       K     T+    + +   +       
Sbjct: 155 AGADVM----------------ALEEL-------KASAVPTYEKALAAKYPHHAVVGTVG 191

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                           L   YP+ G K      G +RA+   V      I V   HL S 
Sbjct: 192 ----------------LWSKYPISGVKPVDIELGWKRAMRATVTTPSGPIAVYVAHLPSV 235

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                   T         + A  L + I+ ++      ++ GD N  +N         ++
Sbjct: 236 RVKLEAGFT----ARQRDKSADALGEAISHERLPRK--ILLGDLNGTMND--------RS 281

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           +    S +R P+                   ID  ++                      +
Sbjct: 282 LTAITSQLRSPQGAVGDGFGFSWPASFPMARIDQILVTG------------VEPMTSWTL 329

Query: 286 KSRGKRLSDHCPISI 300
            + G   SDH PI+ 
Sbjct: 330 PATG---SDHLPIAA 341


>gi|116491630|ref|YP_811174.1| exonuclease III [Oenococcus oeni PSU-1]
 gi|116092355|gb|ABJ57509.1| Exonuclease III [Oenococcus oeni PSU-1]
          Length = 273

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 79/301 (26%), Gaps = 56/301 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +  +SWNI++L+        ++   R    Y  L +       D   +QE          
Sbjct: 1   MNFISWNIDSLNA-----AIQHKSPRGELTYKTLEK-IAAAKPDFFSIQETKLPENGLNK 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        +        +  +    K   +     P++ A  +  + G  
Sbjct: 55  KQDEVLEELFPNYLRFVKNSTPPAKKGYAGVMTLAKEAPI-SYDKPVIDAPGTMDQEGR- 112

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + +E      ++L+++  +                        L +          
Sbjct: 113 ---IVTLEYPD--FYLLNVYTPNSGDGLRRLPARGKWDDQFRHYISDLSER--------K 159

Query: 204 PFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             + +GD N     +                   + F + +          +       +
Sbjct: 160 IVIFSGDLNVAHEEIDLKNSSSNHNSAGFTDQEREKFSRLLSAGFIDTWRLQHPKEIAYS 219

Query: 248 NKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             + RN+          IDY+++  +A + +++    +                DH PI 
Sbjct: 220 WWSQRNRLAKTNNAGWRIDYYIVSNSAKEKIVKTGMIDTGTRA-----------DHAPIY 268

Query: 300 I 300
           +
Sbjct: 269 L 269


>gi|322829003|gb|EFZ32580.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi]
          Length = 612

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 60/214 (28%), Gaps = 23/214 (10%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++SWN+         + W ++ +    D+  +  + +   ADIV LQE+    A  +  P
Sbjct: 3   IISWNV---------AGWSSTSRMIREDFGSIASFLQRTQADIVCLQEVKGSWAKLEADP 53

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                         +   R    D   +                    KD      +R  
Sbjct: 54  C---------GMGASDGGRTLAIDGWESFWSFSGKAHRGFNGVVSFVRKDLTWWCDSRPF 104

Query: 146 VELLVEINGKKIWVLDIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            E  +   G+ I          +   +++                + L   + ++  +  
Sbjct: 105 SEEDLNDEGRVIVTCHSAFVVVNTYVVNARHGQRMAFKMRFLYSLKNLLTQLKKQ--TGK 162

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           P ++ GD N+      +     + +         
Sbjct: 163 PVILVGDLNQTY-RAEDACWSLRRLSLPALRNLV 195


>gi|148908559|gb|ABR17389.1| unknown [Picea sitchensis]
          Length = 303

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 65/218 (29%), Gaps = 44/218 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------- 74
           + ++ +SWN N+L            + R   + T L  + + LD D++ +QE+       
Sbjct: 51  EPLKFMSWNANSL------------LLRLKKNRTELADFVQRLDPDVIAIQEVRIPAAGG 98

Query: 75  ----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---V 121
                         + A+   +                     +  +   A+  K+    
Sbjct: 99  KGGSKNQGELKDDTSSAREEKQTLMRAISCPPLSNYRVWWSLGDTKYAGTALFVKHQCQP 158

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             +  S   +G+         R  V        +   +L+ ++ +  + D          
Sbjct: 159 LKVTFSLDQIGSSALKHEVDGRVIVA-----EFEGFRLLNSYVPNNGWKDDETGFRR--- 210

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
               +  Q + D++    +   P +  GD N     + 
Sbjct: 211 --RRKWDQRMLDFVLGVSDK--PLIWCGDLNVSHQDID 244


>gi|302308418|ref|NP_985322.2| AFL228Wp [Ashbya gossypii ATCC 10895]
 gi|299790623|gb|AAS53146.2| AFL228Wp [Ashbya gossypii ATCC 10895]
          Length = 1116

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/343 (12%), Positives = 97/343 (28%), Gaps = 65/343 (18%)

Query: 2   IRKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           I++YV + +  +       ++  + + ++N+N L+++  ++ W   +             
Sbjct: 554 IKEYVTSKLETMAHEFTKSSKISLLVGTFNVNGLTKKVDITDWLFPIG------------ 601

Query: 61  AKNLDADIVFL--QEMGSYNAVAKVFPKNTWCIFYSTE-----RLINHSKRDSNNDIHTA 113
                 D+V L  QE+   NA + +    +   F+           N        +  ++
Sbjct: 602 -NKYLPDVVVLGMQEVIELNAGSILNADYSKSNFWQQLVNECLNQYNEKYLLLRAEQMSS 660

Query: 114 IAVRKKNVRVLQQSYPLLGA----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
           + +              +             GN+ AV +  E        ++ HL +   
Sbjct: 661 LLILFFVKSTKVSHIKRVEGGSKKTGFGGITGNKGAVAIRFEYGNTSFCFVNCHLAAGIS 720

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN--------- 220
                 +   S       A+ +    ++K          GD N ++              
Sbjct: 721 NTEERRSDYESI------AKGINFTRSKKVPHHDSIFWLGDLNYRLALPNEDVRQILNNK 774

Query: 221 ----------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
                      D   + +    S   F +         K        D      ++ K  
Sbjct: 775 EDGYIEKLLAYDQLTQEMSNGSSFKGFMEPSIQFRPTYKYDHGTNRYD------SSEKAR 828

Query: 271 IQESFSEILYNEDDIKSRGKR-----LSDHCPIS----IDYDF 304
                  I+Y   +++          LSDH P+      D +F
Sbjct: 829 TPSWTDRIIYKGKNLQPMAYGDVSLCLSDHKPVYSAYKADVNF 871


>gi|197120655|ref|YP_002132606.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K]
 gi|196170504|gb|ACG71477.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K]
          Length = 389

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 70/284 (24%), Gaps = 43/284 (15%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                 +          +V LQE       +    +    T     + + + +     + 
Sbjct: 105 HVRAEAIADELAATRPGLVGLQEAYLWRVQDPGDFLAGGTTPATTVAFDYVQDLLDALAA 164

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL-----LVEINGKKIWVLDI 162
            D+H  +A       V    +    A     R  +R  +            G     L  
Sbjct: 165 RDLHYVVA-----AEVTLFDFEAPVATGQDVRMTDRGVILARSDLTTALPAGGVYATLLP 219

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----------------KESLVPFV 206
                  +       S       +  +++   +                        P V
Sbjct: 220 VSVLGNPVQVKRGWVSVDAKYRGEWLRFVSTHLEAYHAGVRTAQAAELAGALAAEARPVV 279

Query: 207 IAGDFNRKINYLGN-------NDDFWKTIDPNDS--LIRFPKEKDSRCNANKNLRNKIPI 257
           + GD N +    G          D W  ++ +       FP++                I
Sbjct: 280 LVGDLNSQPGTEGEAVLAAAGFRDVWAAVEGDAPGLTCCFPEDLRIGPGDPGFADLSTRI 339

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           DY ++      +       E++    D +  G   SDH  ++ +
Sbjct: 340 DYVLVRGPVEPWSA-----EVVGETADERVGGLWPSDHAGVAAE 378


>gi|28704050|gb|AAH47469.1| ANGEL2 protein [Homo sapiens]
          Length = 286

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 18/202 (8%)

Query: 27  VSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +  A+
Sbjct: 1   MSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGAE 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P      ++       +  R        AI  +     +L  +       D      +
Sbjct: 61  IRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISLLDRD 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + LL++       +      + C  ++          +   Q   L   I+      
Sbjct: 116 NVGLVLLLQPK-----IPYAACPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQK 170

Query: 203 V----PFVIAGDFNRKINYLGN 220
                P V+ GDFN        
Sbjct: 171 DGSFCPIVMCGDFNSVPGSPLY 192


>gi|260911351|ref|ZP_05917949.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634530|gb|EEX52622.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 378

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/253 (11%), Positives = 62/253 (24%), Gaps = 27/253 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q +++   N       +  + +             L      +D DIV L E+ +   + 
Sbjct: 46  QDLKVFQLNT-WFGATQVNNAYNG-----------LVDVINQVDPDIVLLCELRNDLLLK 93

Query: 82  KVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           K+   +  +           H K     +  T + V  K      +  P           
Sbjct: 94  KIPDGDSEYTHRLCQSLKTKHQKDYYGKNHGTFVGVLSKYEIKNFKVLPTPTDNYMIKVT 153

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------------YSPSCSLLSQQA 188
                 E+              +L          +                  S   +  
Sbjct: 154 VEVCGQEMTFYSAHLDYKHYACYLPRGYNSGPDWSKLANPITDSERIMKDNRLSTRDEAM 213

Query: 189 QWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           +   D    + +     V+ GDFN    +++  N  D +       +       + +   
Sbjct: 214 EMFLDDAQGEMDKGRIVVLGGDFNEPSDLDWQTNTKDLYSHNGVVANWDCSVMLRKAGFV 273

Query: 247 ANKNLRNKIPIDY 259
                +   P+ +
Sbjct: 274 DTYREKFPSPVTH 286


>gi|163790442|ref|ZP_02184873.1| hypothetical protein CAT7_03019 [Carnobacterium sp. AT7]
 gi|159874346|gb|EDP68419.1| hypothetical protein CAT7_03019 [Carnobacterium sp. AT7]
          Length = 271

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/279 (10%), Positives = 68/279 (24%), Gaps = 57/279 (20%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGS-------------------------YNAVAKVFPKN 87
               L         D++ LQE+                            +  A +  + 
Sbjct: 19  KLKNLCDAITRQSFDVIALQEVNQLMTSATVDQSLLVTFSATNNEHPIKEDNFAFLLQQE 78

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147
                               +     +AV         +S+       +++   +R+ + 
Sbjct: 79  LQKNGL-EYYWTWEPSHIGYDRYDEGLAVLSLKPIQETRSF-FASENTAYNDYKSRKVIG 136

Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
           +      +  W  ++HL  +             C+                     P  +
Sbjct: 137 IK----SENQWFFNVHLGWWQDKHDPFPGQWKKCT-------------AHFATLKEPIFL 179

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVMD 263
            GDFN   +      +       +   +   K+         +     ++ + IDY   +
Sbjct: 180 LGDFNNPAHIKQEGYELVTQNWFDTYHLAAQKDTGFTVADAIDGWSENQSGLRIDYIFAN 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           Q       Q  F++              +SDH  I ++ 
Sbjct: 240 QPVKTISSQVIFNDNNEPI---------ISDHFGIVVEI 269


>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
           18188]
          Length = 1251

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 86/334 (25%), Gaps = 72/334 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+N+         S++  +  R       L    K   AD++ LQE+   + +  +
Sbjct: 283 LKVSSYNV------LVDSIYPPATDRHQILLQTLLS--KASTADVLVLQEVSD-SFLTYI 333

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     Y         ++           V            PL             
Sbjct: 334 LGHDAIRTTYPFATHGPPEQKGIGPLPSIRNVVALSRSNFTWSWLPLGTNHKGAVILALS 393

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              ++  E       +  IHL S  F          + +   QQ Q L ++++    +  
Sbjct: 394 DIGKID-ESGYVPAIIAGIHLSSGLFDY--------AVAARKQQLQKLSNFLSANYTNN- 443

Query: 204 PFVIAGDFNRKIN----------------------------------------YLGNNDD 223
           P VIAGDFN   +                                        +    D 
Sbjct: 444 PKVIAGDFNMTTSTITHEEASGRKSISSRSIETLPVLETMLQYAGYWDSWSVAHTKIRDM 503

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNA-----------NKNLRNKIPIDYFVMDQNAYKFLIQ 272
                   D    +  E+ +  +            +         D  +  ++  +    
Sbjct: 504 MSPARLERDFTQLYDGEQGATFDPLENSLAAISSDSTANPRPQRYDRILFSKDDLRVTGF 563

Query: 273 E--SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               F   + +E       +  SDH  I    +F
Sbjct: 564 NMFGFPVEIIDEATGNIERQFPSDHWGIRASLEF 597


>gi|326664774|ref|XP_003197881.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1149

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 81/312 (25%), Gaps = 83/312 (26%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
             ++L   L+         + + + N+                 R+      +  + K L
Sbjct: 1   MFISLFHLLMA--------LTISTINVR--------------SVRSPIRAQSVLSFLKLL 38

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            +D+  LQE         +   + +  +             SN + +  +A+   N  +L
Sbjct: 39  KSDVFLLQEC-------ALPFISNYRKWEDVWTPGPSLWSGSNQNKNDGVAILINNPNIL 91

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
            +   ++             A  + +   G+   VL+I+             Y       
Sbjct: 92  VKGTTVVRDGR---------AFLVTLTFLGRDFNVLNIYGH-----TDKNERY------- 130

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-------------IDPN 231
                 L + +        P V+AGDFN  +         +K                  
Sbjct: 131 -----ELLEDLQPHMLGKPPLVVAGDFNCILTQKDRKKADFKLDKTSTLLNHLVKDFKLV 185

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           D   +    ++     + +  +   IDY                    +   D       
Sbjct: 186 DCFRQVHPREEGFTWFSSDSTSASRIDYIFTRD---------------FPPVDATLTPTF 230

Query: 292 LSDHCPISIDYD 303
            SDH  +S    
Sbjct: 231 FSDHTILSCTLS 242


>gi|218710298|ref|YP_002417919.1| hypothetical protein VS_2332 [Vibrio splendidus LGP32]
 gi|218323317|emb|CAV19494.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 341

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 82/283 (28%), Gaps = 64/283 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + +  WNI           +K +     S+   L        +D+V LQE      +
Sbjct: 119 SDGLDITVWNI-----------YKQNRNNWQSELNQLSA-----GSDLVLLQEASMTEGL 162

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        S +            +    +     ++ +   +Y      +     
Sbjct: 163 R--------QWVTSGQWGSTRVNAFEAFEQSAGVLNLATHLPIEACAY----THEEPWLQ 210

Query: 141 GNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             + A+    +  NG+++ V++IH  +F F                 Q + L D + + +
Sbjct: 211 LPKSALWSRYLLSNGEELAVINIHAVNFTFGTEDYEA----------QLKSLTDNLQKYR 260

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P + AGDFN        ++  +  +      +   +      +        + +DY
Sbjct: 261 G---PVIFAGDFNSW------SEARFAVLKDALEQVGLTEVAFEP-DNRTQFMTGLVLDY 310

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                  D  K+     SDH P+ + +
Sbjct: 311 VFYRG---------------LEVDKAKAPITDASDHNPMRVTF 338


>gi|26349295|dbj|BAC38287.1| unnamed protein product [Mus musculus]
 gi|123223483|emb|CAM21425.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
 gi|123230064|emb|CAM15344.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 260

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 61/211 (28%), Gaps = 30/211 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--- 80
           +R+VSWNIN +         +          T LR+    LDADIV LQE      V   
Sbjct: 2   LRVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTRDVLTE 57

Query: 81  -AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136
              +         +S  R           D  T +A           L       G  D 
Sbjct: 58  PLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDE 117

Query: 137 FSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLL 184
           F++   R                 +E   K + +++++                    LL
Sbjct: 118 FTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLL 177

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
             +A+ L         +    +I GD N   
Sbjct: 178 QMRAEALLA-------AGSHVIILGDLNTAH 201


>gi|73981665|ref|XP_537277.2| PREDICTED: similar to reverse transcriptase isoform 1 [Canis
           familiaris]
          Length = 1150

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFNRKINY---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDFN  ++                   T+D  D    +     +           
Sbjct: 141 --LILGDFNLALSILDRSSKQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|327538463|gb|EGF25127.1| endonuclease/exonuclease/phosphatase [Rhodopirellula baltica WH47]
          Length = 406

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/365 (11%), Positives = 89/365 (24%), Gaps = 86/365 (23%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE------ 73
             + +R+ S+N++   ++ G    +      +     L    + +  DI+ L E      
Sbjct: 42  STETIRVASFNVSLYGKEAGEVAERLLAGDDSQATD-LATVIQTVRPDILLLCEIDHEPD 100

Query: 74  -----MGSYNAVAKVFPKNTWCIFYSTERL-----------------INHSKRDSNNDIH 111
                  +   +AK      +   +S                        +         
Sbjct: 101 GRTLDAFADGYLAKGNAAIDYPHRWSIPTNTGLLGDLDLDSDGDVELPTDAHGFGQYPGQ 160

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI------------------- 152
            A+AV  +              + S      +    +  +                    
Sbjct: 161 YAMAVLSRFEIDRDAIRTFQTFRWSTMPGSLKPVDPVTGQPYYSDTVWQSLRLSSKNHVD 220

Query: 153 -------------------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-- 191
                              N + + +L  H     F    +     +   +    +++  
Sbjct: 221 VPVSIPSLTSQQSAGVESSNHRVLHLLASHPTPPVFDGDEDRNGKRNHDEIRFWDEYISK 280

Query: 192 --KDWI----------TQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFP 238
              +WI               +   FVIAGD N                I         P
Sbjct: 281 PEAEWIVDDQGFMGGLESDSTADAMFVIAGDLNSDPKQGDSLRSGIANLISNPCVRDAMP 340

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                  +  K  RN+I +DY +   N +          +  +      +  R +DH  +
Sbjct: 341 TSSQHGISTAKFGRNEIRVDYVLPSSNLHVIRSA----VVWPDAQTDLGKRVRATDHRMV 396

Query: 299 SIDYD 303
            ID +
Sbjct: 397 WIDIE 401


>gi|71662292|ref|XP_818155.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70883389|gb|EAN96304.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 535

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/241 (12%), Positives = 61/241 (25%), Gaps = 20/241 (8%)

Query: 33  TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92
                  V        +       L    +  D DIV LQE+        ++    +C +
Sbjct: 136 YYPYDPSVDKELPPFLQPDFRRAYLVNEIRYYDPDIVCLQEVNRVFFNDVLWKYIRYCGY 195

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-------------PLLGAKDSFSR 139
            +  +     K  +       +  R K      +                L+  KD    
Sbjct: 196 GTLYQSSRGYKVRALRRGDNPLLPRHKGKIEEAEDIGNVVLFHKGRFVPILMPGKDLVQH 255

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                 V +  +I    + V+ +   +    ++ +     +   L      L        
Sbjct: 256 LHFAHVVAMRDKITNMTLNVVCVQYTAGESEEAAKIRLHEARQTLQV-LDALNR--NDTD 312

Query: 200 ESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            + +  VI GDFN   +         + F+   D            +    + K  +   
Sbjct: 313 RAHMSNVICGDFNNVHDEEACVQLMRERFFSMHDVVGGPRWTTWFHEDAQTSAKYQKYYA 372

Query: 256 P 256
            
Sbjct: 373 R 373


>gi|225435512|ref|XP_002282995.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1013

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 72/288 (25%), Gaps = 65/288 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+R++SWN+   +  +                 +++   K    D+V LQE         
Sbjct: 2   KIRILSWNVKGANNCD--------------KRKVIKALIKKNKVDLVCLQETKIQEMTRG 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +        F     + +             I V                         N
Sbjct: 48  LIRSIGVGRFLDWGTVDSRGSAG-------GIVVFWD----------------------N 78

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R    + +E     I     + +                         L           
Sbjct: 79  RVLEMIELEKGECSISCHFKNCEDGFTWTFTGVYGPTKRRERESLWNELGAIHGLW---N 135

Query: 203 VPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            P+ +AGDFN  ++    +           F   I+                +   N + 
Sbjct: 136 GPWCVAGDFNAILSPEERSRGGSFNSDMRRFADVIEELQLKDLPLFGGPFTWSGGANNQT 195

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +D F++++            +  ++        + +SDH PI ++
Sbjct: 196 LSRLDRFLVNEG----------WDCRFSHSRQSVLPRPVSDHFPILLE 233


>gi|222624956|gb|EEE59088.1| hypothetical protein OsJ_10924 [Oryza sativa Japonica Group]
          Length = 392

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/275 (9%), Positives = 71/275 (25%), Gaps = 43/275 (15%)

Query: 44  KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERL 98
           ++      +    + +  +   AD+V LQ + +        ++++         ++    
Sbjct: 106 RHRSSSGAARRRSVAEALREAGADMVALQNVRAEEGRGMRPLSELAEGLGMRYVFAESWA 165

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKI 157
             +             AV  +       +  L    D       R  +   +E+ G  ++
Sbjct: 166 PEY-----------GNAVLSRWPIKRWNARRLADHFDF------RNVMRATIEVPGAGEV 208

Query: 158 WVLDIHLKSFCFLDSLENTYS--PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
            +   HL        ++   S                + +     S   +     ++ +I
Sbjct: 209 NLYCTHLDHLDEGLRMKQVDSILRFADGHHHILAGGLNALDASDYSADRWAAIAKYHEEI 268

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------ANKNLRNKIPIDYFVMDQNA 266
                  +  + +     +                          +    +DY +   N+
Sbjct: 269 GKPPPKSEVMRHLKAKRYVDAKDFAGGRDAGLVVVPNGQDVQGTCKYGTRVDYILASPNS 328

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +  S++ +              SDH  + +D
Sbjct: 329 PYNFVPGSYAVVPSMGT---------SDHHIVMVD 354


>gi|189238808|ref|XP_001815482.1| PREDICTED: similar to ap endonuclease, partial [Tribolium castaneum]
          Length = 1545

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 48/196 (24%), Gaps = 45/196 (22%)

Query: 131  LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                D       + AV   +    K I V+  HL +             +        + 
Sbjct: 1369 YDKPDILCIQETKCAVY-KLPEEVKTIEVIHSHLLTG--------RNLVTLPKRLDWNEQ 1419

Query: 191  LKDWITQKKESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPNDSLI 235
             + +I    +S  P +I GD N     +                   D       N  + 
Sbjct: 1420 FEKFIK-NLDSQKPVIICGDMNVAHKEIDLANPKTNTNSAGFSVEERDGMTAFLGNGYVD 1478

Query: 236  RFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
             +      +  A                  +DYF++ Q     +                
Sbjct: 1479 IYRHLYPEKEKAYTFWIYMRNARPNNVGWRLDYFLVSQRFVDNVCDNIIH---------- 1528

Query: 287  SRGKRLSDHCPISIDY 302
                  SDHCP+S+  
Sbjct: 1529 -SDVMGSDHCPLSLHI 1543


>gi|148670957|gb|EDL02904.1| angel homolog 1 (Drosophila) [Mus musculus]
          Length = 674

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 248 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDH 307

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 308 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 367

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 368 VGLVLLLQPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSD- 426

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 427 -----GSHCPIILCGDLNSVPDSPLYN 448


>gi|73964324|ref|XP_547922.2| PREDICTED: similar to angel homolog 1 [Canis familiaris]
          Length = 652

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 226 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDH 285

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 286 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 345

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 346 VGLVLLLQPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSD- 404

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 405 -----GSHCPIILCGDLNSVPDSPLYN 426


>gi|50287175|ref|XP_446017.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525324|emb|CAG58941.1| unnamed protein product [Candida glabrata]
          Length = 359

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/337 (12%), Positives = 93/337 (27%), Gaps = 58/337 (17%)

Query: 24  VRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78
             L+S+N+     +  Q    + +           L ++      ADI+ LQE+ S +  
Sbjct: 22  FTLLSYNLLSPSYMWPQVYTYVPEKYKDWNYRHKLLEQELLDKYRADIMCLQELTSEDYS 81

Query: 79  --AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 +     +   Y  +    + KR         I         + +S   L     
Sbjct: 82  NFWKKALQTNMNYGSNYIAKTPPQYWKRPVEQMDGVGIFYNLDKFEFISRSGIYLNQLLG 141

Query: 137 FS--------------------------------RAGNRRAVELLVEIN--GKKIWVLDI 162
                                             ++ N+ A+ + ++    G    V++ 
Sbjct: 142 VFSNNELEYLEKKPVTLTDGAGNQVGEQSLLQILKSKNQVALFVSLKHKETGNVFVVINT 201

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
           HL      D            L++  +     +    +  +  +  GD N   + L  N 
Sbjct: 202 HLYWKY-DDVKLTQCMIIMRELARIIEKHLVGLENVTDDKIKILFTGDLNSTSDSLVINF 260

Query: 223 DFWKTIDPNDSLIRFPKEK------------DSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
              + +  ++  +  P +             +   +   + + K   DY       +K  
Sbjct: 261 LKGQIVSHDNLNVINPMKPYLEHCVYDDVPEELFTHTCYSGKLKGIFDYIWYHDTDFKLR 320

Query: 271 IQESFSEILYN----EDDIKSRGKRLSDHCPISIDYD 303
              S  E+ +                SDH P+  +++
Sbjct: 321 RILSGREVSHELAALNQFGLPNENHPSDHIPLFTEFE 357


>gi|320009290|gb|ADW04140.1| Endonuclease/exonuclease/phosphatase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 324

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 74/316 (23%), Gaps = 81/316 (25%)

Query: 1   MIRKYVLALVFFLVPCTASVA--------------QKVRLVSWNINTLSEQEGVSLWKNS 46
           ++R+  LA+   L+P  +  A                  +V  NI               
Sbjct: 72  LLRRSFLAVTALLLPVVSWSAVFGPLLSGAGLAPDDAFTVVQHNI--------------- 116

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                 D            A+++ ++E+ +                 + E  +       
Sbjct: 117 -SDVNPDPAATAHALAGTGAELIAVEELTAPA-------------VPAFEAALAGDYPHH 162

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  +  +     V        G  + + R      +         ++ V   HL S
Sbjct: 163 ATRGTVGLWSKHPLGAVRPVDIRPSGVGEGWDR-----GLRATARTPRGEVAVYVAHLPS 217

Query: 167 -FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                 +   +     S                 E L   ++ GD N  ++         
Sbjct: 218 VRIGPTTGLTSGRRDESAALL-------GEALAAEPLERVILLGDLNSTLDD-------- 262

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           + ++P   L+  P    +             ID  +        +     +         
Sbjct: 263 RGLEPVTELMDEPGPGFAFSWPAAFP--VARIDQILTRSATVTGIRSLPAT--------- 311

Query: 286 KSRGKRLSDHCPISID 301
                  SDH P+  D
Sbjct: 312 ------GSDHLPVVAD 321


>gi|301758631|ref|XP_002915168.1| PREDICTED: synaptojanin-2-like [Ailuropoda melanoleuca]
          Length = 1650

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 88/340 (25%), Gaps = 68/340 (20%)

Query: 22   QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD------IVFLQE 73
            +++R+   +WN+N   +     L    +     D   L   A + D D       V  +E
Sbjct: 777  KRIRIAAGTWNVNGGKQFRSKLLGTAELADWLLDSPKLAGLAGSPDEDSPADIFAVGFEE 836

Query: 74   MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
            M   +A   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 837  MVELSAGNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIR 896

Query: 126  QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                         +AGN+ AV +  + +      +  HL +        N      +   
Sbjct: 897  DVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFVCSHLTAGQSQVKERNEDYREIT--- 953

Query: 186  QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR--- 236
               Q L   + +   S       GDFN +I+              WK +   D L     
Sbjct: 954  ---QKLSFPMGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKS 1010

Query: 237  ------FPKEKDSRCNANK-------------------------NLRNKIPIDYF----- 260
                     E                                    R +   D       
Sbjct: 1011 SGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKRHSFDRTAGELN 1070

Query: 261  VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            ++D +                         + SDH P+  
Sbjct: 1071 LLDNDIEADSTVRHSW-SPGALKYYGRAELQASDHRPVLA 1109


>gi|298480131|ref|ZP_06998330.1| LOW QUALITY PROTEIN: endonuclease/exonuclease/phosphatase family
           protein [Bacteroides sp. D22]
 gi|298273940|gb|EFI15502.1| LOW QUALITY PROTEIN: endonuclease/exonuclease/phosphatase family
           protein [Bacteroides sp. D22]
          Length = 113

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 13/120 (10%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           K ++ +  F     ++ AQ ++++S+N     E  G S+ +               + + 
Sbjct: 6   KPIVWVCLFFFAYQSTYAQALKIMSYNCRMSGEMTGYSVKEY------------AVFIRK 53

Query: 64  LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
            + D+V LQE+       K     T          +     D+    +  +A+  K   V
Sbjct: 54  YNPDVVMLQEIDYNTKRNKNQDFTTQLAAELGLFSVFGKAMDTGGGEY-GVAILSKYPFV 112


>gi|297828519|ref|XP_002882142.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297327981|gb|EFH58401.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 444

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/276 (10%), Positives = 68/276 (24%), Gaps = 77/276 (27%)

Query: 59  QYAKNLDADIVFLQ-----EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           +  + LDAD++ LQ     E      ++ +         ++      +            
Sbjct: 166 EVLRELDADVLALQDVKADEADQMRPLSDLAAALGMNYVFAESWAPEY-----------G 214

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+  K          +    D       R  ++  +E+ G  ++     HL        
Sbjct: 215 NAILSKWPIKSSDVLRIFDDTDF------RNVLKASIEVPGSGEVEFHCTHLDHL----- 263

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR-KINYLGNNDD-------- 223
                        +Q   +         + VP ++AG  N    +               
Sbjct: 264 -------DEKWRMKQVDAIIR------STNVPHILAGALNSLDESDYSPERWTDIVKYYE 310

Query: 224 ----------FWKTIDPNDSLIRFPKEKD--------SRCNANKNLRNKIPIDYFVMDQN 265
                       + +   +         +           +     +    +DY +   +
Sbjct: 311 EMGKPIPKAQVMRFLKSKEYTDAKDFAGECESVVVVAKGQSVQGTCKYGTRVDYILASSD 370

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +    +  S+S +              SDH  + +D
Sbjct: 371 SPYRFVPGSYSVLSSKGT---------SDHHIVKVD 397


>gi|190345986|gb|EDK37968.2| hypothetical protein PGUG_02066 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 444

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 60/213 (28%), Gaps = 15/213 (7%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
                +++++S+N    S           +  +  +   +L    K  DADI+ LQE+  
Sbjct: 59  PPSPLRLKIMSYNTLAQSLVRRTLFPTSGNALKWATRSKVLTSELKYYDADIMCLQEVDE 118

Query: 77  ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +   +   +  +   +       H    +      +     + +   ++    L +
Sbjct: 119 VQFESYWKEKLKELGYEYKFERAYTKRHGIVIAFKPQLVSSTY-SRVINYDREDAGFLSS 177

Query: 134 KDSFSRAGNRRAVELLVEINGK------KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           + +    G    +    E   K       I +   HL             S      + Q
Sbjct: 178 QTTTDNLGLVTCLSFTKETREKYPQLKSGIVIATTHLFWHPMGTYERARQSFLLMSRTIQ 237

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
              +         +     +AGDFN +      
Sbjct: 238 FAMML----GGSPNSFYHFMAGDFNTQPFDFPY 266


>gi|167756414|ref|ZP_02428541.1| hypothetical protein CLORAM_01947 [Clostridium ramosum DSM 1402]
 gi|167703822|gb|EDS18401.1| hypothetical protein CLORAM_01947 [Clostridium ramosum DSM 1402]
          Length = 268

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 63/224 (28%), Gaps = 33/224 (14%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + + ++NI +L+                +D     +   +L  DI+ LQE+   +  
Sbjct: 44  TNTLGIGTYNIKSLNY-------------GKNDLKSFNKDIIDLKLDIICLQEVDKNSLR 90

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +  F         S                +  + +  K   +   +  L  +       
Sbjct: 91  SGNFDMLKIMANSSGYCYYYFYPTMWILSGYYGLGILSKYSIIEVMAQRLPNSII----R 146

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R      +  N + I + + HL                     +Q     D++ +  +
Sbjct: 147 EPRILTRTKLYFNEQIINIYNTHLTY------------ADNQYRIKQM----DYVKKHVD 190

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
                ++AGDFN          +  K I+ N     F +     
Sbjct: 191 FNSYSILAGDFNSFKMNNKFKMEGVKCINENKKYKTFCEFAAPD 234


>gi|2072977|gb|AAC51279.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|5070622|gb|AAD39215.1|AF148856_2 unknown [Homo sapiens]
          Length = 1275

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|147784395|emb|CAN72731.1| hypothetical protein VITISV_037853 [Vitis vinifera]
          Length = 976

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 74/290 (25%), Gaps = 75/290 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWNI  L               +     +++ + +  + D+V  QE        + 
Sbjct: 432 MKIISWNIRGLG--------------SRKKRRVVKDFLRLQNPDVVMFQETKREVCDRRF 477

Query: 84  FP------KNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLLG 132
                      W  F +            +  +                 +       L 
Sbjct: 478 VGSVWSVKNKEWXAFPACRASGGILITWDSQKMSNEDVVIGFFSVSVKFLLDGCGPLWLS 537

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL-SQQAQWL 191
           A    +    R+ + + +      +    +   S+C           S  L  S+  +  
Sbjct: 538 AVYGPNNPLTRKDLWVEL------LDFFGLTFPSWCVGGDFNVIRRRSEKLGGSRFTRDF 591

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             +I + +    P                          N S      ++   C      
Sbjct: 592 DGFIKECELHDPPL------------------------RNASFTWSNMQESPVCK----- 622

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                +D+F+               E+ + +   +   +  SDH PI +D
Sbjct: 623 ----RLDWFLYSNE----------WELSFPQSLQEVLPRWTSDHWPIVLD 658


>gi|221042584|dbj|BAH12969.1| unnamed protein product [Homo sapiens]
          Length = 375

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 18/202 (8%)

Query: 27  VSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +  A+
Sbjct: 1   MSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGAE 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P      ++       +  R        AI  +     +L  +       D      +
Sbjct: 61  IRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISLLDRD 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + LL++       +      + C  ++          +   Q   L   I+      
Sbjct: 116 NVGLVLLLQPK-----IPYAACPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQK 170

Query: 203 V----PFVIAGDFNRKINYLGN 220
                P V+ GDFN        
Sbjct: 171 DGSFCPIVMCGDFNSVPGSPLY 192


>gi|291575305|gb|ADE10230.1| putative membrane protein [Actinoplanes liguriensis]
          Length = 301

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/274 (10%), Positives = 65/274 (23%), Gaps = 50/274 (18%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           ++  +    + + +++V     D     +       D+V L+E+      A         
Sbjct: 77  VDRDTGTPDLIVVQHNVSDENPDPAGTARALLAAHPDLVGLEEVLPEAVAA--------- 127

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150
                            + +   +A+  +      ++  +               +  + 
Sbjct: 128 ------YRGVLDAELPFHTVQGTVALWSRYPLTGAEAIDIRPHDLGEDWNR---GLRAVA 178

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
              G    V   HL S     +   +     S        L   +    + +   V+ GD
Sbjct: 179 RTPGGDTAVYVAHLPSVRVTAAGLTSARRDESARK-----LGALLA--ADPVPRLVVIGD 231

Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
            N  ++  G        ID                           ID  +        L
Sbjct: 232 LNTSVDDRGLRPIRQVMIDSPADF----------AFTWPARTPVARIDQVLARSMTVTRL 281

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                              +  SDH P++ +  F
Sbjct: 282 TALP---------------RTGSDHLPLAAEIRF 300


>gi|34392581|dbj|BAC82623.1| pol-like protein [Ciona intestinalis]
          Length = 1235

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 79/295 (26%), Gaps = 75/295 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++VS+N+N L              R  +    + ++ KN   D++ LQE  S   V   
Sbjct: 1   MKIVSFNVNGL--------------RNNAKRKCIFRFLKNKKFDVILLQETHSSLDVE-- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +            S              V +L           + S    R
Sbjct: 45  ---VMWKREWGNAPTFFSHGTTSARG-----------VCILLSPQQNWTVHHTESDTEGR 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +    K++ + +++  +                            I    ++  
Sbjct: 91  F-LIASISAGPKRLTLANVYGPNSDNP---------------IFFDSFFGIINDYLDNDA 134

Query: 204 PFVIAGDFNRKIN---------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             +I GDFN  ++                     ++ K  D  D        +       
Sbjct: 135 --IIGGDFNAILSNDLDKSPGNKHANGKSSSEIKNYMKEFDLVDIFRELNPRQRRFSRVQ 192

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +N      ID+F++ +     +        +             SDH  + ++ +
Sbjct: 193 QNPFTGSRIDFFLVSEGLTPHIKNCDIEPSIK------------SDHRLVVLNIN 235


>gi|297711442|ref|XP_002832360.1| PREDICTED: deoxyribonuclease-1-like 1-like [Pongo abelii]
          Length = 218

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/171 (8%), Positives = 37/171 (21%), Gaps = 18/171 (10%)

Query: 135 DSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           +       R        +       + ++ +H         L   Y     +        
Sbjct: 33  NDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHW---- 88

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                         ++ GDFN     L         +           + +         
Sbjct: 89  ---------QSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTH 139

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                I   +  +     L   +  +   +    +     +SDH P+ ++ 
Sbjct: 140 CTYDRI--VLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVEL 188


>gi|21218370|gb|AAM44053.1|AF510741_1 unknown [Homo sapiens]
 gi|55665689|emb|CAH71919.1| angel homolog 2 (Drosophila) [Homo sapiens]
 gi|119613774|gb|EAW93368.1| angel homolog 2 (Drosophila), isoform CRA_d [Homo sapiens]
 gi|119613775|gb|EAW93369.1| angel homolog 2 (Drosophila), isoform CRA_d [Homo sapiens]
          Length = 375

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 18/202 (8%)

Query: 27  VSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +  A+
Sbjct: 1   MSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGAE 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P      ++       +  R        AI  +     +L  +       D      +
Sbjct: 61  IRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISLLDRD 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + LL++       +      + C  ++          +   Q   L   I+      
Sbjct: 116 NVGLVLLLQPK-----IPYAACPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQK 170

Query: 203 V----PFVIAGDFNRKINYLGN 220
                P V+ GDFN        
Sbjct: 171 DGSFCPIVMCGDFNSVPGSPLY 192


>gi|291456067|ref|ZP_06595457.1| conserved hypothetical protein [Bifidobacterium breve DSM 20213]
 gi|291382476|gb|EFE89994.1| conserved hypothetical protein [Bifidobacterium breve DSM 20213]
          Length = 443

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/308 (7%), Positives = 62/308 (20%), Gaps = 65/308 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               ++  +  +++ N                     +D   +    +     ++ LQE+
Sbjct: 178 STRTTLPTQFTVMTLNCRY----------------GRADANDIIANIRKRGISVLALQEV 221

Query: 75  GSYNAVAK----VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                       +     +  F   +   N       +      A     V +     P 
Sbjct: 222 TDELIARLTEAGLNELLPYHQFGEAKDTDNGGFNVLYSAYEPG-ASVPNVVSIPAADVPA 280

Query: 131 LGAKDSFSRAGNRR--------------AVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
           +  + +                                + I     H KS     +  + 
Sbjct: 281 ITLRIADQAKMPPASTSTNGTTIRIAANPSTTTQAHPDRTITFCSAHPKSPMRGCADWSA 340

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                  +++          +        V+ GD N   ++       ++ +  +     
Sbjct: 341 GILGLREITK---------ARSIAHHNIAVVMGDLNSSTDHPS-----FRALLKSGFKDA 386

Query: 237 FPKEKDSRCNANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              +                I  D+ +                  +   D         D
Sbjct: 387 SLTQAAGPNLTFPRWLKWPRIELDHVLFTPGVRPS------QVKSFEIKDT--------D 432

Query: 295 HCPISIDY 302
           H  +    
Sbjct: 433 HLALVATL 440


>gi|198421408|ref|XP_002128823.1| PREDICTED: similar to ANGEL2 protein [Ciona intestinalis]
          Length = 639

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/362 (8%), Positives = 80/362 (22%), Gaps = 76/362 (20%)

Query: 17  TASVAQKVRLVSWNINT---LSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFLQ 72
             +      ++S+NI     L     +    +    +    +  L +    +++DI+ LQ
Sbjct: 272 PTTQQDSFSVMSYNILAQKLLDINSYLYSDCDPDVLQWDFRWPNLMKEMSLINSDIICLQ 331

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+   +  A+V P      +    +    S     + + TA    K ++           
Sbjct: 332 EVEECHYEAQVKPWLESRGYNFAYKKRTGSDPTKPDGVLTACRSNKFHIVDAIPVEYYRQ 391

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             +          + L +         + I      +     +      +      +   
Sbjct: 392 KDELTKCHNVGLILMLKMLHPDMNGATVCIGNTHLLYNPKRGDIKMIQLATFLAAVRNAM 451

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGN-------------------NDDFWKTIDPNDS 233
               ++       V+ GDFN   +                              ++    
Sbjct: 452 QNSLRQTGIHPSLVLCGDFNSTPSSPLYQFVTSGHINYQGMSAKQISGQITSGGLNRELP 511

Query: 234 LIRFPK--------------EKDSRCNANKNLRN--------KIPID------------- 258
            +  P+                                       +D             
Sbjct: 512 AVLLPQCLNINGDCTQSPDESSPHGIKHTLTHGFGNIMSSNQPHQLDEATTMQNNGATVD 571

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKS------------------RGKRLSDHCPISI 300
           Y    +N    +     ++  ++                             SDH P+  
Sbjct: 572 YIFYTENNKLNVSSCQSNQPKFSVKLKLRGRLSHSLAKNVYKVGGIPNALHSSDHLPVIA 631

Query: 301 DY 302
           ++
Sbjct: 632 EF 633


>gi|134096822|ref|YP_001102483.1| phytase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005133|ref|ZP_06563106.1| phytase [Saccharopolyspora erythraea NRRL 2338]
 gi|133909445|emb|CAL99557.1| phytase [Saccharopolyspora erythraea NRRL 2338]
          Length = 399

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/363 (11%), Positives = 93/363 (25%), Gaps = 90/363 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           VR  ++N  +L+      L  +           + +  +    D+V L E       A  
Sbjct: 35  VRFATFN-ASLNRATEGELLADLSTPDDEQARKVAEVVQRNRPDVVLLNEFDHVPGGAAV 93

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSN-----------------------------NDIHT 112
             F  N   + ++  + +++    +                                   
Sbjct: 94  DAFRANYLAVGHNGAQPVDYPYAYTAPVNTGVPSGMDLDNDGSTGGPGDAYGFGQFPGQY 153

Query: 113 AIAVRKKNVRVLQQSY----------------PLLGAKDSFSRAGNRRAVELL------- 149
            + V  K+     +++                P       +     + A+ L        
Sbjct: 154 GMVVLSKHPIGDVRTFQNFRWTDMPGAMLPDDPATPEPADWYSPREKEALRLSSKSHWDL 213

Query: 150 -VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV----- 203
            + + G+ + +L  H     F    +     +   +   A ++        ++       
Sbjct: 214 PIHVGGRTVHLLASHPTPPSFDGPEDRNGVRNHDEIRFWADYVAGAGYVYDDAGRTGGLE 273

Query: 204 ---PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------------------PKEKD 242
              PFVIAGD N   N   + D     +     ++                       + 
Sbjct: 274 RGAPFVIAGDQNADPNDGDSADRAATQLLNAQRVVDPRPGSFGAVEAARNQGGANTGHRG 333

Query: 243 SRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           +      +  ++      +DY +        L+            D  SR    SDH  +
Sbjct: 334 APFFDTADFGDQSPGNLRVDYVLPS----LPLVALRSGVFWPGGHDELSRLNDTSDHHLV 389

Query: 299 SID 301
            +D
Sbjct: 390 WVD 392


>gi|225453658|ref|XP_002268290.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 232

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/286 (10%), Positives = 71/286 (24%), Gaps = 65/286 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+  ++E                   +++   +    D+  +QE        +V
Sbjct: 3   LKLLSWNVRGVNES--------------RKRKVIKSVIRKQKVDLFCIQETKIQIMTERV 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   F          K  +       I +      +    + +     S       
Sbjct: 49  VRSLGTGRFL-------EWKVLNACGSAGGILICWDKRVLELLEWEVGQFSLSCRFRTME 101

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V                                     L ++   ++           
Sbjct: 102 NGVIWAFTGVYGPFT-------------------RLEREWLWEEVGAIRGIWEG------ 136

Query: 204 PFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           P+ + GDFN  +     N           F + +D    +    +          N  ++
Sbjct: 137 PWCLGGDFNITLAQGERNRQGRITSAMRRFAEVVDDLGLVDLQMQGGAFTWTGGLNNMSR 196

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +D F++                 ++    +   + +SDH P+ +
Sbjct: 197 ARLDIFLVSP----------CWLDQFSRVSQRRLPRPISDHFPVLL 232


>gi|163310734|ref|NP_653107.2| protein angel homolog 1 [Mus musculus]
 gi|218563496|sp|Q8VCU0|ANGE1_MOUSE RecName: Full=Protein angel homolog 1
          Length = 667

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 241 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDH 300

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 301 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 360

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 361 VGLVLLLQPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSD- 419

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 420 -----GSHCPIILCGDLNSVPDSPLYN 441


>gi|62859005|ref|NP_001016236.1| angel homolog 1 [Xenopus (Silurana) tropicalis]
 gi|89268167|emb|CAJ82107.1| novel protein [Xenopus (Silurana) tropicalis]
 gi|183985907|gb|AAI66333.1| angel homolog 1 (Drosophila) [Xenopus (Silurana) tropicalis]
 gi|213624587|gb|AAI71302.1| angel homolog 1 (Drosophila) [Xenopus (Silurana) tropicalis]
          Length = 566

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/230 (10%), Positives = 67/230 (29%), Gaps = 11/230 (4%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI +    +           S+      +  + Q  ++ +ADI+ LQE+   +
Sbjct: 138 DFSVLSYNILSQDLADQNPELYQHCDPSILHWDYRWPNILQELQHWEADIICLQEVQQDH 197

Query: 79  AVAKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
               V P  +   +   +            +       + + + +V   +    +L   +
Sbjct: 198 YKEHVEPSLSAIGYSCHFKRRTGRKTDGCCTCYKTQRFMLLSESHVEFFRPGIDVLNRDN 257

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                  +  +    +     I +   +          +   +    LL+     +    
Sbjct: 258 VGLVLLLKPLLPDAQQGRHNPIPLCVANTHLLYNPRRGDIKLAQLALLLA----EVDKIS 313

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                S  P ++ GD N   +    +   +  ++           ++  C
Sbjct: 314 LTAHGSHYPVILCGDLNATPDSPLYHLLRYGYLNYRGMPSWKVSGQEQYC 363


>gi|190573285|ref|YP_001971130.1| putative exported endonuclease/exonuclease/phosphatase family
           protein [Stenotrophomonas maltophilia K279a]
 gi|190011207|emb|CAQ44817.1| putative exported endonuclease/exonuclease/phosphatase family
           protein [Stenotrophomonas maltophilia K279a]
          Length = 402

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/386 (10%), Positives = 89/386 (23%), Gaps = 101/386 (26%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
                  T   +  +RL ++N +  S+  G  + +       +    +    + +  D+V
Sbjct: 22  FATSPAMTEKPSAALRLATYNTSLYSDDAGGLIKELEGDSEHAR--KIAAVLQQVRPDLV 79

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-------------------- 109
            L E   ++   +             +         +                       
Sbjct: 80  LLNEF-DFDDAHRAADLFQKRYLEVAQPGGGKPLHFAYRYLAPVNTGVPSGLDLDNNGVV 138

Query: 110 ------------------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA------ 145
                                 + V  +      +       K S      R        
Sbjct: 139 GGEGRSRGNDAWGYGLHPGQYGMLVLSRYPIDEAKVRSFQLLKWSAMPGAIRPVDPRTGK 198

Query: 146 ------------------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                              ++ V+     +  L  H     F    +   + +   L   
Sbjct: 199 SFYNDHVWSQLRLSSKSHWDVPVKTPAGVVHALVSHPTPPVFDGPEKRNAARNHDELRLW 258

Query: 188 AQWLKDWITQK----------KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
            ++L                       FVI GD N          +    +  N  ++R+
Sbjct: 259 QEYLSKGDKPWLCDDKGQCGGLAQDARFVILGDLNNDPVDGDGRHEAIVELIENARVLRY 318

Query: 238 P-------------------KEKDSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESF 275
           P                   + K +  +A  +   K     +DY +      +++    F
Sbjct: 319 PTPRSVGGEQTSLAYAAKGIERKGAPFHATGDFGPKSGTMRLDYVLPSTGF-EYVGSGIF 377

Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301
                + +   + G   SDH  + +D
Sbjct: 378 WPANESPEAKIADG---SDHHLVWVD 400


>gi|304373334|ref|YP_003856543.1| Membrane nuclease, lipoprotein [Mycoplasma hyorhinis HUB-1]
 gi|304309525|gb|ADM22005.1| Membrane nuclease, lipoprotein [Mycoplasma hyorhinis HUB-1]
          Length = 445

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/363 (11%), Positives = 98/363 (26%), Gaps = 92/363 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------- 76
           V+L  WNI  L+  + V+  K+S  +T     +L +     +AD+V L E+ +       
Sbjct: 82  VKLGFWNI--LNYDDDVNSNKDSFAKT-YKAQMLAKTISFNNADVVGLVEVNAGSNKENG 138

Query: 77  -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--------------- 120
             + V  +   +    + S      + + + +     A   +                  
Sbjct: 139 VDSIVKDLNNLDKEAKWTSIVSDPVYGEGNESQKERVAFIFKSSLFDILEINKEKLYGSN 198

Query: 121 VRVLQQSYPLLGAKDSFSRA--------------------GNRRAVELLVEING--KKIW 158
             +L    P+  +  ++                         R  V    ++    ++  
Sbjct: 199 PYLLVYDNPVFDSVPAYFAKSKVSKGKATFDDKLTTKNVDFARPPVAAKFKLKNTEEEFV 258

Query: 159 VLDIHLKSFCFLDSLENT------------YSPSCSLLSQQAQWLKDWITQKKE--SLVP 204
           V+  H  S    ++                 S + S    +A  + + +   +   +   
Sbjct: 259 VVASHFDSPGVNNNPTAKGKEEGEVDNTKFDSRNGSQELSEANHMLEAMNWLENKTNTQN 318

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-- 262
                D N K       + F   +     LI    +     N           D      
Sbjct: 319 QFFMADTNIKEKSND--NAFEHLLTQYKLLISKTNKTTLGEN---FDTYSSSYDKIFFKK 373

Query: 263 -----------------------DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                                   +N    +++   ++  +++D        +SDH P+ 
Sbjct: 374 EGKLTVDKVYKYPLYDLIKDKLTSENELSQVLENKKNKSNFSKDIKARIRDFISDHSPVF 433

Query: 300 IDY 302
           +  
Sbjct: 434 VSI 436


>gi|49259594|pdb|1VYB|A Chain A, Endonuclease Domain Of Human Line1 Orf2p
 gi|49259595|pdb|1VYB|B Chain B, Endonuclease Domain Of Human Line1 Orf2p
          Length = 238

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|2072964|gb|AAC51271.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ N+N L+                     L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNVNGLNSP--------------IKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +T   +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSILDRSTRQKVNKDTQELNSALHQTDLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|332023175|gb|EGI63431.1| Synaptojanin-1 [Acromyrmex echinatior]
          Length = 1157

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/324 (10%), Positives = 73/324 (22%), Gaps = 50/324 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD------ADI--VFLQEMG 75
           V + ++N+N       V     S+     D      +  +L        DI  +  +E+ 
Sbjct: 532 VSIGTYNVNGGKHFRSVVYKDVSLADWLFDGPNRSSFLVSLQQEDNVPVDIFAIGFEEIV 591

Query: 76  SYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVRVLQQS 127
             NA   +         W          +             +     +R  +   L+  
Sbjct: 592 DLNASNIMAASSDNAKAWAEELQKVLCKDTEYVLVTYQQLVGVCLYLFIRPVHAPYLRDV 651

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                        GN+ A  +   +       +  H  +     +  N      +     
Sbjct: 652 AVDCVKTGLGGATGNKGAAAIRCVLYSTSFCFVCAHFAAGQSQVNERNADYAEITRK--- 708

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPN 231
              +   + +   +       GDFN +++   +                 D      +  
Sbjct: 709 ---ITFPMGRTLNTHDYVFWCGDFNYRVDMDKDEMKELIKQSELDQILQYDQLRVQQEQG 765

Query: 232 DSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQESFSEIL 279
           +    F +   +     K                    D  +  +      I        
Sbjct: 766 NVFKNFQEGPITFAPTYKYDLFSDDYDTSEKCRQPAWTDRVLWKRRKQIPDIDSPTDWNS 825

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
                      + SDH P+    D
Sbjct: 826 GKLVYYGKAELKQSDHRPVIATID 849


>gi|147803328|emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/287 (10%), Positives = 70/287 (24%), Gaps = 66/287 (22%)

Query: 24   VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++++SWN   L               +     +++ + ++   D+V  QE        + 
Sbjct: 830  MKIISWNTRGLG--------------SKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRF 875

Query: 84   FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                                          I +     ++ ++   L             
Sbjct: 876  VGS-------VWTARNKDWAALPACGASGGILIIWDTKKLSREEVMLGSFS--------- 919

Query: 144  RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              V +   +NG          +S           S     L  +   +         +  
Sbjct: 920  --VSIKFTLNG---------CESLWLSAVYGPNNSALRKDLWVELSDIAGL------ASP 962

Query: 204  PFVIAGDFNRKINYL---------GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             + + GDFN                +  DF   I   + +    +      +  +     
Sbjct: 963  RWCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVC 1022

Query: 255  IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +D F+               E  + +       +  SDH PI ++
Sbjct: 1023 KRLDRFLYSNE----------WEQTFPQSIQGVLPRWTSDHWPIVLE 1059


>gi|339777|gb|AAB59368.1| ORF2 contains a reverse transcriptase domain [Homo sapiens]
          Length = 1275

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|154278848|ref|XP_001540237.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150412180|gb|EDN07567.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1241

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 87/314 (27%), Gaps = 39/314 (12%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL--QEM 74
           + ++ VR  + ++N+N  +     +     +     +             +IV L  Q++
Sbjct: 606 TSSKTVRIWVGTFNLNGRTNGANGTNLSPWLLPQLDNLQETPSIFAIGFQEIVELSPQQI 665

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKKNVRVLQQSYPLLG 132
            S +   ++  +N      +               +      A+       L     ++ 
Sbjct: 666 MSTDPGNRMIWENAVKHTLNDYANRKGESEYVLLRSGQLVGTALLIFVKSELLSEIKVVE 725

Query: 133 A----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQ 187
                      AGN+    +  + +  +I  +  HL +     D     Y      L  Q
Sbjct: 726 GSVKKTGMSGMAGNKGGCAIRFQYSNTRICFVTAHLAAGFSNYDERNRDYQTINQGLRFQ 785

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPN 231
                    +  E     +  GDFN +I                    ++D     +   
Sbjct: 786 R-------NRSIEDHDTIIWLGDFNYRIGLPDDTVRGLIKAGDFESLYSHDQLNLQMVAG 838

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRG 289
            +   + + + +     K        D     + A    +  +  +        +  +  
Sbjct: 839 LTFPFYSEARITFPPTYKYDNGTDQYD---TSEKARTPAWCDRILWKGANIRLLEYNAAP 895

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+   +D
Sbjct: 896 LKFSDHRPVYATFD 909


>gi|145348797|ref|XP_001418830.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579060|gb|ABO97123.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 333

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 78/324 (24%), Gaps = 63/324 (19%)

Query: 24  VRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +++ +WN   L            +  KR  +    +   ++    D+V LQEM    A  
Sbjct: 5   LKVCTWNAQMLPGVFAGQGGTRTDIAKRAHAMANNILCCSRADAIDVVCLQEMWEVEAAK 64

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFSR 139
            +         +                    + +  K   V     + P  G +     
Sbjct: 65  ALKVALREEFPFVYAPSA-----------RCGLMIASKFSMVCNHFTALPAKGVERLSFT 113

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            G   +   L         V  +                      ++Q   +KD + + +
Sbjct: 114 KGVSTSFLRLTAAEDPTTRVAIVLNTHLQSDYWSSGRD-----TRAKQISCIKDVVHRAE 168

Query: 200 -------ESLVPFVIAGDFNRKINYLGNNDDFWKT---IDPNDSLIRFPKEKDSRCNAN- 248
                    +   ++ GD N         D   K    +D    L         R  +  
Sbjct: 169 MECAGNGYEVDRIMLVGDLNIVAGSGEYEDLMNKFPGSVDLMAPLTDIDGSIAGREGSTR 228

Query: 249 --------KNLRNKIP--------------------IDYFVMDQNAYKFLIQESFSE--- 277
                        +                      +DY +   +     +         
Sbjct: 229 GVDRSFRLTFPVARWRHVVLPCLGESRYIDLVPKVVLDYVIDLSSMVTRGVPLHHRHADS 288

Query: 278 -ILYNEDDIKSRGKRLSDHCPISI 300
             +++     +RG  LSDH PI  
Sbjct: 289 GYVHHAMCRDARGLALSDHYPIVA 312


>gi|325927255|ref|ZP_08188512.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           perforans 91-118]
 gi|325542375|gb|EGD13860.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           perforans 91-118]
          Length = 410

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/379 (11%), Positives = 90/379 (23%), Gaps = 103/379 (27%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             A ++R+ ++N +  S++ G  + +       +    +    + +  D+V L E   ++
Sbjct: 35  PAAAQLRIATYNTSLYSDEAGGLIRELQGDSAHAR--KIAAVLQRVRPDLVLLNEF-DFD 91

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNND----------------------------- 109
              +             +     + R                                  
Sbjct: 92  PEHRAADLFQQRYLQVAQPGGGEALRYPYRYLAPVNTGVPSGLDLDNNGSTGGEGRARGN 151

Query: 110 ---------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------AVEL 148
                        + V  +     Q        K S      R             A+  
Sbjct: 152 DAWGYGLHPGQYGMLVLSRYPIDAQAVRSFQLLKWSALPGALRPIDPASKTSYYSDAIWA 211

Query: 149 LVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----- 191
            + ++ K             +  L  H     F  + +   + +   L     +L     
Sbjct: 212 QLRLSSKSHWDVPVRTPLGVVHALVSHPTPPVFDGAEKRNAARNHDELQLWRAYLDNAPE 271

Query: 192 -KDWITQKK------ESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            + W+   K      +S   FVI GD N    +  G +      ID    L       D 
Sbjct: 272 SQRWLCDDKGGCGGLDSDARFVILGDLNNDPVDGAGRHTAIRALIDHPRVLHYPTPRSDG 331

Query: 244 R---------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                                           + +DY +  +     +    F       
Sbjct: 332 GPEKTAEYAALGIAHSGDPHQVTGDFGPQAGTMRLDYVLPSRQFT-LIGSGIFWPASSAP 390

Query: 283 DDIKSRGKRLSDHCPISID 301
           +   + G   SDH  + +D
Sbjct: 391 EAAIADG---SDHHAVWVD 406


>gi|313228925|emb|CBY18077.1| unnamed protein product [Oikopleura dioica]
          Length = 423

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/283 (11%), Positives = 84/283 (29%), Gaps = 59/283 (20%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123
           D D++ LQE+ + +A   +  K      +   +             +++ + +  K   V
Sbjct: 153 DLDVICLQEVFNEDAWNILNEKLRSKYPYILFDAHRVRVSSLKFTMVNSGLYIASKYPIV 212

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
               YP   +    + +G +  +   ++I  K   ++           +  +++  S + 
Sbjct: 213 QSMFYPFKNSYSEDALSG-KGVLCAEIQIAEKSSIIVATTHM-----QAPTSSFVKSSAT 266

Query: 184 LSQQAQWLKDWITQKKESLV----PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
             +Q + ++D +++  ++        ++ GDFN       ++      I  +        
Sbjct: 267 RVEQYKEMEDCMSEFGDTAELDVQAEILCGDFNTDPRSPIDDACLKSQIFEDFRDPLAHC 326

Query: 240 E----------------KDSRCNA--------NKNLRNKI---------------PIDYF 260
           E                  S   +             +++                 DY 
Sbjct: 327 ELGSCLKVVSTRLEQVQTPSGLKSVLLDQDPKYVWSSSRVNRETGLVESLENGSTRFDYI 386

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ++       +                ++   L+DH PIS   +
Sbjct: 387 LVRPATPSPIS---------VTAQFHTKLAGLTDHVPISAVLN 420


>gi|284992131|ref|YP_003410685.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
 gi|284065376|gb|ADB76314.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
          Length = 258

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 65/280 (23%), Gaps = 43/280 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+                  T+     +  +      D+  L E+         
Sbjct: 1   MRIGTWNLRLCPTSTS----------TSERGQAIAAWMDAQAVDVWLLTEV--------- 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                                   +   +     K+   +  +              G+ 
Sbjct: 42  -----------HRDWAPRDGHLVVSPRRSDDVECKRWAAIESKLPMSELTTGDSPHPGDE 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V   + ++G  + V    L                              IT ++    
Sbjct: 91  GLVLARLALDGTSVLVACSVLPWKGAAKYWNGLPPGQFDQWRFVLDHHVRRITAERRPGE 150

Query: 204 PFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             V  GD N+++         D   T+      +          + N   R    ID+  
Sbjct: 151 ALVWGGDLNQELTPPTWGGTRDGATTLRAAFEYLGLTALTQGLSHLN---RLSHSIDHLA 207

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +  +    ++ E          D K     LSDH     D
Sbjct: 208 VSAD----VLAERVEVHRPTWADHKD----LSDHAAYIAD 239


>gi|133251679|dbj|BAF49143.1| cytolethal distending toxin B [Campylobacter fetus]
          Length = 284

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 89/311 (28%), Gaps = 67/311 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  ++ +    +    +  +  ++ +WN+   S         +           +RQ  
Sbjct: 19  MRNVIMIIFIATLGF--AKPEDYKIATWNLQGSSAITESKWNIS-----------VRQII 65

Query: 62  KNLDA-DIVFLQEMGSYNAVAK-----------VFPKNTWCIFYSTERLINHSKRDSNND 109
              +  DI+ +QE G+    A            +  ++ W +   +     +      + 
Sbjct: 66  SGENPADILAVQEAGNLPQTALPTGRSINQGGTIVTEHLWQLGSISRPFQVYIYYAQIDT 125

Query: 110 I--HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 +A+  +         P            +R  + + +  +       +IH  + 
Sbjct: 126 GANRVNLAIVSRIKADEIIILPPPTVA-------SRPLIGIRIGND----VFFNIHALAN 174

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
             +D+     S      +                 + ++I GDFNR             T
Sbjct: 175 GGVDAPAIINSVFDRFRNM--------------PNITWMILGDFNRSPES------LRGT 214

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +     +        +        R+   +D+ ++  +A   +     + ++        
Sbjct: 215 LGLETRVRVTFLAPPAPT-----QRSGGTLDWAIVGNSAGDLVRTTLVAVLMLANLRT-- 267

Query: 288 RGKRLSDHCPI 298
               +SDH P+
Sbjct: 268 --HLVSDHFPV 276


>gi|115499658|dbj|BAF33498.1| cytolethal distending toxin B [Campylobacter fetus]
          Length = 284

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 90/311 (28%), Gaps = 67/311 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  ++ +    +    +  +  ++ +WN+   S         +           +RQ  
Sbjct: 19  MRNVIMIIFIATLGF--AKPEDYKIATWNLQGSSAITESKWNIS-----------VRQII 65

Query: 62  KNLDA-DIVFLQEMGSYNAVAK-----------VFPKNTWCIFYSTERLINHSKRDSNND 109
              +  DI+ +QE G+    A            +  ++ W +   +     +      + 
Sbjct: 66  SGENPADILAVQEAGNLPQTALPTGRSINQGGTIVTEHLWQLGSISRPFQVYIYYAQIDT 125

Query: 110 I--HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 +A+  +         P            +R  + + +  +       +IH  + 
Sbjct: 126 GANRVNLAIVSRIKADEIIILPPPTVA-------SRPLIGIRIGND----VFFNIHALAN 174

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
             +D+     S      +                 + ++I GDFNR            + 
Sbjct: 175 GGVDAPAIINSIFDRFRNM--------------PNITWMILGDFNRSPES-------LRG 213

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
               ++ +R               R+   +D+ ++  +A   +     + ++        
Sbjct: 214 TLGLETRVRVTFLTP----PAPTQRSGGTLDWAIVGNSAGDLVRTTLVAVLMLANLRT-- 267

Query: 288 RGKRLSDHCPI 298
               +SDH P+
Sbjct: 268 --HLVSDHFPV 276


>gi|327480543|gb|AEA83853.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 369

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 57/253 (22%), Gaps = 45/253 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L         D++   E  S+           W                   D  
Sbjct: 118 RQAERLLALVHEYLPDVLVTLETDSW-----------WEAHLDQLSDDYPHSIRCPQDNL 166

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + V  +      +   L+        A  R             + V    L       
Sbjct: 167 YGMHVYSRLPLEEPELKFLVEDDVPSMHARVRV---------DDSLSVRMHFLHPAPPSP 217

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           +  +  +     L   A+ ++        S  P ++ GD N            ++ I   
Sbjct: 218 TENDESTERDVELLVVARSIQH-------SDDPIIVTGDLNDVAWSPTTR--LFRKIS-- 266

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L               +   + P+D+F    +              +    +      
Sbjct: 267 GLLDPRVGRGMYNTFHAHHWFLRWPLDHFFHSAH--------------FRFVRLLRLPDI 312

Query: 292 LSDHCPISIDYDF 304
            SDH P+ I+  +
Sbjct: 313 GSDHFPVFIELQY 325


>gi|183600243|ref|ZP_02961736.1| hypothetical protein PROSTU_03785 [Providencia stuartii ATCC 25827]
 gi|188022538|gb|EDU60578.1| hypothetical protein PROSTU_03785 [Providencia stuartii ATCC 25827]
          Length = 281

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 81/290 (27%), Gaps = 73/290 (25%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  + + +V+WNI           +K            L +     D  ++ LQE     
Sbjct: 58  AAGETLDVVTWNI-----------YKQQRPNWKRVLNELVK-----DKKLILLQEAQMSP 101

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +                      K  ++       +     V  L  ++P+        
Sbjct: 102 EL---------------ISFAASHKLIADQVPALPFSQHPAGVMTLATAHPIYCCPLREK 146

Query: 139 RAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R A   L+      NG+ + V ++H  +F F   +             Q   L + 
Sbjct: 147 EPLLRLAKSALITVYPLPNGEHLMVANVHAINFSFGVDVYTR----------QLSKLGEH 196

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRN 253
           I++      P ++AGDFN             + ++     +R    K+   +   +    
Sbjct: 197 ISKHVG---PVLLAGDFNA---------WSRQRVNALKRFVRSVGLKEVNYDTDQRTKAF 244

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             P+DY                        D        SDH PI   +D
Sbjct: 245 GRPLDYLFYRG---------------LKVKDCYVTNTDASDHNPIITQFD 279


>gi|126272963|ref|XP_001371745.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 729

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 85/306 (27%), Gaps = 49/306 (16%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N  S   G+  W N   R   D   L    + LD  I       S      +  
Sbjct: 87  VGTWNVNGQSPDSGLEPWLNCD-RDPPDIYCLG--FQELDLSIEAFFYFESTKEHEWLAS 143

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                 F S    +   +      +  A   RK++   +Q             + GN+ A
Sbjct: 144 VKRALHFKSKYNKVQLVRLVGMMLLIFA---RKEHCMYIQDVVTDTVGTGLMGKMGNKGA 200

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           V +    +     +++ HL +        N                +  +          
Sbjct: 201 VAVRFMFHNTTFCIVNSHLAAQMEDVEGRNQDYKDICARMSFLVPNQGHLNIM--KHDVV 258

Query: 206 VIAGDFNRKI--------NYLGNNDDFWKTI---------DPNDSLIRFPKE--KDSRCN 246
           +  GD N +I         +L + +D  K +             +   F +   +     
Sbjct: 259 IWLGDLNYRIYIYSAKEVKWLISRNDLHKLLKLDQLNIQRSDKKAFTDFTEGEIRFIPTY 318

Query: 247 ANKNLRNKI------PI----DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                 ++        I    D  +           E+  ++ Y        G + SDH 
Sbjct: 319 KFDTKTDRWDSSGKCRIPAWCDRILW--------KGENIQQLRYQSH----MGLKTSDHK 366

Query: 297 PISIDY 302
           P+S  +
Sbjct: 367 PVSSSF 372


>gi|91775238|ref|YP_544994.1| endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus
           KT]
 gi|91775382|ref|YP_545138.1| endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus
           KT]
 gi|91709225|gb|ABE49153.1| Endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus
           KT]
 gi|91709369|gb|ABE49297.1| Endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus
           KT]
          Length = 365

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/247 (8%), Positives = 59/247 (23%), Gaps = 45/247 (18%)

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            L Q  ++L  D++   E               W    +           +  D    + 
Sbjct: 119 KLIQQVRSLRPDLLLTLETD-----------RVWEQALTAIEPEYPYVVRAPMDNLYGMH 167

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  +      +   LL  +              ++   G  + +  +H +     ++ ++
Sbjct: 168 LYSRLPLRDAEVKFLLSPEIPSIH-------ATVMLPCGAPVKLYCLHPEPPSPTEAPDS 220

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               +          L        ++    ++ GD N            ++ +     L 
Sbjct: 221 VLRDA---------ELLIVGDAVSDTEESVIVMGDLNDVAWSRTTR--LFQRVS--GLLD 267

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                       +     +  +D+     +              +    ++      SDH
Sbjct: 268 PRKGRHHISTYHSDYPFMRWALDHIFHSPD--------------FGLIKMQRLPHIGSDH 313

Query: 296 CPISIDY 302
            P+    
Sbjct: 314 FPVLTHL 320


>gi|281338530|gb|EFB14114.1| hypothetical protein PANDA_009240 [Ailuropoda melanoleuca]
          Length = 363

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/292 (9%), Positives = 67/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ N+N L+                     +  + K  D  I  LQE          
Sbjct: 7   LSIITLNVNGLNAP--------------IKQHRVADWIKRHDPSICCLQETHFEPKDTSR 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +   R    +             ++                          
Sbjct: 53  LKVKGWRTIFHASRPQKKAGVAILTSDRLDFKLKT------------------------- 87

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               ++ +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 88  ----IVRDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 138

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 139 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 197

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 198 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 237


>gi|218673811|ref|ZP_03523480.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli GR56]
          Length = 325

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 92/316 (29%), Gaps = 70/316 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD----------YTLL--RQYAKNLD----- 65
            +RL ++N+  L  +   + ++N +++              Y  L   +     D     
Sbjct: 2   SLRLATFNVENLMTRFDFTGFRNQLRQDRVIKLFEVNSEGVYQQLEQARVIAATDDTRQM 61

Query: 66  ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
                    ADI+ LQE+ +  A+        + +  +  R     + + +  I  A+ +
Sbjct: 62  TALAIADADADILCLQEIDNMAALQAFEYGYLFRMVGNGYRQKFLVEGNDSRGIDVAVLM 121

Query: 117 RK------KNVRVLQQSYPLLGAKD-------------SFSRAGNRRAVELLVEINGKKI 157
           R+      K      +S+ +   +D                +   R  +EL + I G+ +
Sbjct: 122 REETRDGQKIELKDIRSHAMTTYRDFDLFDEDLALSNRIDDKIFKRDCLELDLLIGGRPL 181

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFN- 212
            +  +H KS        +    +  +   +A+ ++  I     +       F I GD N 
Sbjct: 182 SLYVVHFKSMGNPRDGLDGRQSTLPVRRAEARAVRRIIEDSFGAGRTAKKSFAICGDMND 241

Query: 213 ---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-- 255
                             + L              +     + +        + R     
Sbjct: 242 YQERVDVVGRRGAGYHFEHQLEAESALDVFSHDGFAENVVRRRQPLDRWTLYHTRGPQEQ 301

Query: 256 ---PIDYFVMDQNAYK 268
               +DY  +      
Sbjct: 302 HLCQLDYIWLSPALAA 317


>gi|147787725|emb|CAN71912.1| hypothetical protein VITISV_018965 [Vitis vinifera]
          Length = 1856

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 42/133 (31%), Gaps = 25/133 (18%)

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------FWKTI 228
                 L  +   ++D          P+ + GDFN  +     +           F + +
Sbjct: 235 KEDRECLWDEFGAIRDLW------GDPWCVGGDFNVILAQGERSRQGRVTSAMRRFAQVM 288

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
           D  + +    +      +   + +    +D F++  +              ++    K  
Sbjct: 289 DDLELIDLPLQGGSFTWSGGLHNQAWARLDRFLVSPS----------WLDQFSSVTQKRL 338

Query: 289 GKRLSDHCPISID 301
            + +SDH PI I+
Sbjct: 339 SRPISDHFPIIIE 351


>gi|17512364|gb|AAH19148.1| Angel homolog 1 (Drosophila) [Mus musculus]
          Length = 667

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 241 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDH 300

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 301 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 360

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 361 VGLVLLLQPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSD- 419

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 420 -----GSHCPIILCGDLNSVPDSPLYN 441


>gi|72008481|ref|XP_786487.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus]
 gi|115968135|ref|XP_001192231.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus]
          Length = 238

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 68/242 (28%), Gaps = 37/242 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              ++ ++++RLV+WNI  L  ++           T +  +      ++L  D++FLQE+
Sbjct: 27  TSLSATSKRLRLVTWNIYGLGNKD-----------TLARTSAACDTLESLFPDVIFLQEV 75

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                             +  +  +    +        A        R    +       
Sbjct: 76  -------------IPKTLHFIQERLGSLYQLVPGGQQNAYFTLTLVKRSPDINILQTKIH 122

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  + +     G K+  ++ HL+S                    Q       
Sbjct: 123 SFPKTKMARNLLIVKTACYGVKVTFMNTHLES----------RMQDRPERRNQLSQCMAE 172

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +  +    +  +  GD N     +  +D          +     K++   CN N    + 
Sbjct: 173 MKAQGPE-MVAIFGGDTNLDTYDVNQDDAIRNL--KAATFELIGKKRIPECNNNFPSDHW 229

Query: 255 IP 256
             
Sbjct: 230 GV 231


>gi|213964825|ref|ZP_03393024.1| exonuclease III [Corynebacterium amycolatum SK46]
 gi|213952361|gb|EEB63744.1| exonuclease III [Corynebacterium amycolatum SK46]
          Length = 318

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/342 (11%), Positives = 84/342 (24%), Gaps = 88/342 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + + N+N +             +R+ ++  LL ++ K+  +D+V LQE+    A   
Sbjct: 2   SLTIATINVNGIRA--------AVKERSETNLGLL-EWLKHTSSDVVLLQEV---RATDD 49

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              K     F +    +      +       I  R     V          +     +G 
Sbjct: 50  QACKALAPAFDAGWHWVGAENLGAKGRAGVGILSRFPLNDVQVGIGSEEFEESGRFISGV 109

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             A +  ++ +   + +  ++L S   L   ++         S     L      K    
Sbjct: 110 APAADTGLDAD---VQIASLYLPSGAALSEKQDEKYRFLDAFSDYLADLGA----KGRDG 162

Query: 203 VPFVIAGDFNRKINYLGNNDDF------------------------------------WK 226
              VI GD+N         +                                       K
Sbjct: 163 HHAVIGGDWNICHREQDLKNWKTNRRKSGFLPQERAWMDSVFGCWPDEVPQDSQVQASDK 222

Query: 227 TIDPNDS-----------------LIRFPKEKDSRCNANKNLRNK---------IPIDYF 260
            ++                          +              +           IDY 
Sbjct: 223 ELESGTFSDGSVWEAPALNADPVWFDVTRRLHPEADGPWSWWTYRGKAFDTDAGWRIDYQ 282

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +   K  +           D   +   R +DH P+ ++Y
Sbjct: 283 AATEPMLKRAVSA-------VVDKPATYDLRWTDHAPVIVEY 317


>gi|17980447|gb|AAL50637.1| unknown [Homo sapiens]
          Length = 1275

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|330861047|emb|CBX71317.1| UPF0294 protein YE0917 [Yersinia enterocolitica W22703]
          Length = 260

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 90/295 (30%), Gaps = 73/295 (24%)

Query: 14  VPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +P  A +     +R++ WNI                K+  + +  + +     DA ++ L
Sbjct: 31  LPPGAPLPTTEFLRVMVWNIF---------------KQQRAQWLSVLKEFGR-DAQLMLL 74

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE  +   + +                     + ++     A       V  L  ++P+ 
Sbjct: 75  QEAQTTPELVRFA---------------TSHYQAADQVPAFAFPQHPSGVMTLAATHPVY 119

Query: 132 GAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                      R +   L+ +    +G+ + V++IH  +F     + +           Q
Sbjct: 120 CCPLREREPLLRLSKSALITVYPIHDGRLLMVVNIHAVNFSLGVDVYSK----------Q 169

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + + + I   +    P ++AGDFN       N    +      + +             
Sbjct: 170 LEPIGEQIAMHRG---PVILAGDFNAWSRQRVNALQCFAQGLGLEEVEFSTD-------- 218

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           N++     P+D+                        D      R SDH P+ +++
Sbjct: 219 NRSRAFGKPLDFVFYRG---------------LTLADTSVLVTRASDHNPLLVEF 258


>gi|332162782|ref|YP_004299359.1| hypothetical protein YE105_C3162 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667012|gb|ADZ43656.1| hypothetical protein YE105_C3162 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 253

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 90/295 (30%), Gaps = 73/295 (24%)

Query: 14  VPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +P  A +     +R++ WNI                K+  + +  + +     DA ++ L
Sbjct: 24  LPPGAPLPTTEFLRVMVWNIF---------------KQQRAQWLSVLKEFGR-DAQLMLL 67

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE  +   + +                     + ++     A       V  L  ++P+ 
Sbjct: 68  QEAQTTPELVRFA---------------TSHYQAADQVPAFAFPQHPSGVMTLAATHPVY 112

Query: 132 GAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                      R +   L+ +    +G+ + V++IH  +F     + +           Q
Sbjct: 113 CCPLREREPLLRLSKSALITVYPIHDGRLLMVVNIHAVNFSLGVDVYSK----------Q 162

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + + + I   +    P ++AGDFN       N    +      + +             
Sbjct: 163 LEPIGEQIAMHRG---PVILAGDFNAWSRQRVNALQCFAQGLGLEEVEFSTD-------- 211

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           N++     P+D+                        D      R SDH P+ +++
Sbjct: 212 NRSRAFGKPLDFVFYRG---------------LTLADTSVLVTRASDHNPLLVEF 251


>gi|281425940|ref|ZP_06256853.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oris F0302]
 gi|281399833|gb|EFB30664.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oris F0302]
          Length = 379

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 72/262 (27%), Gaps = 45/262 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q +++   N       +  + +             L      +D DIV L E+ +   + 
Sbjct: 47  QDLKVFQLNT-WFGATQVNNAYNG-----------LVDVINQVDPDIVLLCELRNDLLLK 94

Query: 82  KVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           K+   +  +           H K     +  T + V  K      +  P           
Sbjct: 95  KIPDGDGEYTHRLCQSLKTKHQKDYYGKNHGTFVGVLSKYEIKSFKVLPAPTDN------ 148

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFL---------------------DSLENTYSP 179
                +++ VE+ G+++    +HL    +                      DS       
Sbjct: 149 ---YMIKVTVEVRGQEMTFYSVHLDYKHYACYLPRGYNSGPDWSKLPNPITDSKRIMKDN 205

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFWKTIDPNDSLIRF 237
             S   +  +   D    + +     V+ GDFN    +++  N  D +            
Sbjct: 206 RLSTRDEAMEMFLDDARSEMDRGRIVVLGGDFNEPSDLDWQANTKDMYSHNGVVADWDCS 265

Query: 238 PKEKDSRCNANKNLRNKIPIDY 259
              + +        +   P+ +
Sbjct: 266 VMLRKADFVDTYREKFPNPVTH 287


>gi|182433994|ref|YP_001821713.1| hypothetical protein SGR_201 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178462510|dbj|BAG17030.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 343

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/294 (10%), Positives = 70/294 (23%), Gaps = 77/294 (26%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P  A  A ++R+ + N N  +                +D   + +  +    D++ +Q+M
Sbjct: 109 PQVAEGAVELRVATINTNGGA----------------ADARAVVRLVRTERIDVLAVQQM 152

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                V  +       +    E    +              V  +       +     A 
Sbjct: 153 P-PGGVEALDRAGLGALLPHQELHPEYDSS-----------VYSRLPLGEAGTTRADTAW 200

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                          V + G+ +  + +H                + + L+++A      
Sbjct: 201 PQ---------TVAEVAVGGRSVRFVAVHTYYPLGSPERWTRDMAALTSLARRA------ 245

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251
                      V  GDFN  +++    D     +            +  R  A       
Sbjct: 246 -------GPDTVFLGDFNASLDHAPMRDLLAAGLTD-------THAELGRGWAPTWPVGL 291

Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 + +D+ +         + E                    DH  +    
Sbjct: 292 MLVPPVVQLDHVLHGSGLAGVSVGERTVPGT--------------DHRAVVAVL 331


>gi|159466054|ref|XP_001691224.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158279196|gb|EDP04957.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 390

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 55/206 (26%), Gaps = 16/206 (7%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR--TTSDYTLLRQYAKNLDADIVFLQ 72
              +S   ++ +V +N+                +       +  L+Q   +  AD++ LQ
Sbjct: 8   ALQSSEPDEISVVCYNLLADVYATPKRYPYVRPEWLAWPHRWAALQQQLASFGADVICLQ 67

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+              W    S+  L  ++    +    +  A     V      +    
Sbjct: 68  EVE----------PARWQEIVSSPALAGYTGLLQDRGRGSDAAP----VITNALLWRPDK 113

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
               +S + +R  +   V  +G     L                   S +  + Q     
Sbjct: 114 LGLVWSESRSRALLAAFVFWDGVGQQQLLYVANLHLEGSPYRPNDRISQTRSALQRLEAH 173

Query: 193 DWITQKKESLVPFVIAGDFNRKINYL 218
                        V+ GDFN   +  
Sbjct: 174 QLSHGLSPGDAAVVVCGDFNSGRHET 199



 Score = 39.9 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 10/54 (18%), Gaps = 2/54 (3%)

Query: 251 LRNKIPIDYFVMDQNAYK--FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +D+     N       +                     SDH PI    
Sbjct: 303 PSLASSLDFIWASCNLEVTALYVPVEARHQGLIAHQALPNQHYPSDHLPIGAVL 356


>gi|2136112|pir||S65824 reverse transcriptase homolog - human transposon L1.1
 gi|339771|gb|AAA51622.1| ORF2 [Homo sapiens]
          Length = 1275

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis
           SLH14081]
 gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis
           SLH14081]
          Length = 1266

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 86/334 (25%), Gaps = 72/334 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+N+         S++  +  R       L    K   AD++ LQE+   + +  +
Sbjct: 283 LKVSSYNV------LVDSIYPPATDRHQILLQTLLS--KASTADVLVLQEVSD-SFLTYI 333

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     Y         ++           V            PL             
Sbjct: 334 LGHDAIRTTYPFATHGPPEQKGIGPLPSIRNVVALSRSNFTWSWLPLGTNHKGAVILALS 393

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              ++  E       +  IHL S  F          + +   QQ Q L ++++    +  
Sbjct: 394 DIGKID-ESGYVPAIIAGIHLSSGLFDY--------AVAARKQQLQKLSNFLSANYTNN- 443

Query: 204 PFVIAGDFNRKIN----------------------------------------YLGNNDD 223
           P VIAGDFN   +                                        +    D 
Sbjct: 444 PKVIAGDFNMTTSTITHEEASGRKSISSRSIETLPVLETMLQYAGYWDSWSVAHTKIRDM 503

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNA-----------NKNLRNKIPIDYFVMDQNAYKFLIQ 272
                   D    +  E+ +  +            +         D  +  ++  +    
Sbjct: 504 MSPARLERDFTQLYDGEQGATFDPLENSLAAISSDSTANPRPQRYDRILFSKDDLRVTGF 563

Query: 273 E--SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               F   + +E       +  SDH  I    +F
Sbjct: 564 NMFGFPVEIIDEATGNIERQFPSDHWGIRASLEF 597


>gi|194670839|ref|XP_584939.4| PREDICTED: angel-like [Bos taurus]
 gi|297479947|ref|XP_002691168.1| PREDICTED: angel-like [Bos taurus]
 gi|296482881|gb|DAA24996.1| angel-like [Bos taurus]
          Length = 708

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 56/207 (27%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +   +  +  L Q  ++ D DI+ LQE+   +
Sbjct: 282 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWSYRFANLMQEFQHWDPDILCLQEVQEDH 341

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 342 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 401

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 402 VGLVLLLQPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSD- 460

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P V+ GD N   +    N
Sbjct: 461 -----GSHCPIVLCGDLNSVPDSPLYN 482


>gi|298709337|emb|CBJ31273.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 388

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/339 (10%), Positives = 69/339 (20%), Gaps = 65/339 (19%)

Query: 23  KVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYN 78
             R+ ++NI    L+E               +    ++           ++ LQE+G   
Sbjct: 54  DFRVATYNILCSHLAEPTRFPQCSPRNLDAPTRLKRVKHKLDAEISKGSVICLQEVGIGW 113

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSN------------------NDIHTAIAVRKKN 120
           A             + T     H                            T    R+  
Sbjct: 114 AGDLHVYFMDRGYAFVTAHYGKHFNNYMGVALAWPLDKYECLTVDTTRLSDTRRWGREPR 173

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRR--AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
               ++         S   A  R    +   +        + +                 
Sbjct: 174 QEREEKEAKQAAEPPSTPIAERRFNQVLFARLRPKTGAADLPNGGTFCIGTYHMPCLFNI 233

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI--DPNDSLIR 236
               ++      L      K     P V AGDFN   +           +     D  +R
Sbjct: 234 RPVMVMH---TSLAIRHLAKLAGPDPLVFAGDFNFNPDSDCYKLAVEGDLPESSGDFPVR 290

Query: 237 FPKEKDSRCNANK------------------------NLRNKIPIDYFVMDQNAYKFLIQ 272
              EKD                                      +DY           ++
Sbjct: 291 PEWEKDWTPKTGVCLQSAYKQVDGKEPDFTNNAKVEDWDPFIDTLDYIFHTPGITA--VK 348

Query: 273 ESFSEILYNEDDIKSRGKRLSDH----------CPISID 301
               +     +      +  SDH           P++ +
Sbjct: 349 VLPLKHRSEVNGPFPVSEEPSDHVILAAEYKVDRPVAAE 387


>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
          Length = 1266

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 86/334 (25%), Gaps = 72/334 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ S+N+         S++  +  R       L    K   AD++ LQE+   + +  +
Sbjct: 283 LKVSSYNV------LVDSIYPPATDRHQILLQTLLS--KASTADVLVLQEVSD-SFLTYI 333

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +     Y         ++           V            PL             
Sbjct: 334 LGHDAIRTTYPFATHGPPEQKGIGPLPSIRNVVALSRSNFTWSWLPLGTNHKGAVILALS 393

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
              ++  E       +  IHL S  F          + +   QQ Q L ++++    +  
Sbjct: 394 DIGKID-ESGYVPAIIAGIHLSSGLFDY--------AVAARKQQLQKLSNFLSANYTNN- 443

Query: 204 PFVIAGDFNRKIN----------------------------------------YLGNNDD 223
           P VIAGDFN   +                                        +    D 
Sbjct: 444 PKVIAGDFNMTTSTITHEEASGRKSISSRSIETLPVLETMLQYAGYWDSWSVAHTKIRDM 503

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNA-----------NKNLRNKIPIDYFVMDQNAYKFLIQ 272
                   D    +  E+ +  +            +         D  +  ++  +    
Sbjct: 504 MSPARLERDFTQLYDGEQGATFDPLENSLAAISSDSTANPRPQRYDRILFSKDDLRVTGF 563

Query: 273 E--SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               F   + +E       +  SDH  I    +F
Sbjct: 564 NMFGFPVEIIDEATGNIERQFPSDHWGIRASLEF 597


>gi|256391060|ref|YP_003112624.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256357286|gb|ACU70783.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 392

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 80/316 (25%), Gaps = 54/316 (17%)

Query: 2   IRKYVLALVFFLVPCTA------------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           ++K+ + +        A            S    +R++S N+             +S   
Sbjct: 118 LKKWAIGISLLTCAVWAGNFAPTMLRSGGSGPADIRVLSQNL-------------SSGDA 164

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
              D + + Q A+   AD+V LQ +              +    +    +  S+    + 
Sbjct: 165 GAPDLSGIGQLAEQRGADVVVLQGLSKNVQATDQTAPARYPYHLAMYEFVVWSRYPIGST 224

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +    +    +Q       +         R  ++L      +++ V  +HL     
Sbjct: 225 QPVDLTAGGRPAGFVQSGAAAGDSSSGTFGGLLRFTLDLD---QSRQVTVYAVHLPQPSL 281

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTI 228
             S                + L+  ++  +    P  V+ GD +             ++ 
Sbjct: 282 SHSGFGVARD---------EALEQLVSDVQAEKSPNLVVVGDLDVAQTDRAV-RPLLRSS 331

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
               S                     + +D  +        L   +   +          
Sbjct: 332 TGLVSAQAKAGSGFGFTWPATFP--VVRLDDVLTRG-----LTPVASVVLPAVGPQQA-- 382

Query: 289 GKRLSDHCPISIDYDF 304
                 H PI  D  F
Sbjct: 383 ------HRPIEADLKF 392


>gi|170044316|ref|XP_001849798.1| skeletal muscle/kidney enriched inositol 5-phosphatase [Culex
           quinquefasciatus]
 gi|167867515|gb|EDS30898.1| skeletal muscle/kidney enriched inositol 5-phosphatase [Culex
           quinquefasciatus]
          Length = 564

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 87/316 (27%), Gaps = 55/316 (17%)

Query: 26  LVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMGSY--NAV 80
           +V+WN++T   +   ++          SD  L          D  +  LQE+ +   N +
Sbjct: 66  IVTWNVSTKFPDNISLNKLLGLEASAQSDADL---------PDFFVFGLQEVNAQPQNTL 116

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLLGAKDS 136
             +F  + W   +      +        +    + +    R+K++  L+Q          
Sbjct: 117 YNLFKDDLWTQKFKDLL-KDRDYVVIKTEQMQGLLLSVFARRKHLLHLRQVETEYTRTGL 175

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               GN+ AV + + + G  I +++ HL +             +      Q         
Sbjct: 176 GGIWGNKGAVSIRLNVYGCSICLVNAHLAA----HDHMLEERINDYEKIVQEHKFHVKAK 231

Query: 197 QKKESLVPFVIAGDFNRKIN-----YLGNNDDF------------------------WKT 227
           +           GD N ++                                      ++ 
Sbjct: 232 EAIFDHDYVFWFGDLNFRLTGEATTSAEEIRAMVARDELKKLIEKDQLLLVRREGRAFQK 291

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +           + +   +     R     D  +    A +    ++    +        
Sbjct: 292 LQERLPQFPPTFKFEHGSSEYDMKRRPAWTDRILY---AVRENTYQNVKLTVEQTSYKSH 348

Query: 288 RGKRLSDHCPISIDYD 303
               +SDH P+S ++ 
Sbjct: 349 PSYNISDHKPVSSEFT 364


>gi|161504279|ref|YP_001571391.1| hypothetical protein SARI_02386 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865626|gb|ABX22249.1| hypothetical protein SARI_02386 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 269

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 85/305 (27%), Gaps = 50/305 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M + +   L+  +    +     +   R+++WN+   S         ++  +   +   L
Sbjct: 1   MKKNFFHLLIMIICTYISFACANISDYRVMTWNLQGSSA--------STESKWNVNVRQL 52

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                    DI+ +QE G+    A    ++                  +           
Sbjct: 53  LS--GTSGVDILMVQEAGTIPTSAVPTGRHIQPFGVGIPIDEYTWNLGTTRRQDIRYIYY 110

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL----LVEINGKKIWVLDIHLKSFCFLDSL 173
            +     ++    + ++         R   +    ++ I       L  H  +    D+ 
Sbjct: 111 SRIDVGARRVNLAIVSRQRADNVYVLRPTTVASRPVIGIGLGNDVFLTAHALASGGPDAA 170

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                 +      Q + L             + +AGDFNR  + L + D   + ++   +
Sbjct: 171 AIVRVTTNFFRQPQMRHLS------------WFLAGDFNRAPDRLES-DLMTEHLERFVT 217

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           ++   +           L   + +D  +  Q                   +     +  S
Sbjct: 218 VLAPTEPTQIGGGI---LDYGVIVDRALYSQRV-----------------EASRNPQLAS 257

Query: 294 DHCPI 298
           DH P+
Sbjct: 258 DHYPV 262


>gi|115481910|ref|NP_001064548.1| Os10g0401100 [Oryza sativa Japonica Group]
 gi|110289058|gb|ABG66071.1| endonuclease/exonuclease/phosphatase family protein, putative,
           expressed [Oryza sativa Japonica Group]
 gi|113639157|dbj|BAF26462.1| Os10g0401100 [Oryza sativa Japonica Group]
          Length = 411

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/245 (11%), Positives = 64/245 (26%), Gaps = 35/245 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +  +++++N+           W             L    +  + D +  Q +       
Sbjct: 139 KTFKIMTYNV-----------WIREDIELHRRLGALGDLIQLHNPDFICFQ-VPGNKENE 186

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+ P     +             ++            K         P   +        
Sbjct: 187 KIEPLPV--VVLHPPARGLPPNLEAKLAGR-----MSKLPVSESNPIPFSKS------IM 233

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +V+     + V   HL+S C L  L             QA+   + + Q + +
Sbjct: 234 KRELCVAVVKTGEIHLAVGTSHLESPCPLPPLW--DLKYSEKRVAQAKQSLEILGQLRNA 291

Query: 202 LVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
               +  GD N        +   +      ++       +  +  +    + N + +   
Sbjct: 292 ----IFCGDMNWEDKVDGPFPLPDGWIDAWVELKPGDNGWTYDTKANAMLSANFKQQKRP 347

Query: 258 DYFVM 262
           D FV 
Sbjct: 348 DQFVC 352


>gi|224081991|ref|XP_002195088.1| PREDICTED: similar to inositol polyphosphate 5-phosphatase
           [Taeniopygia guttata]
          Length = 812

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 78/316 (24%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S  E +  W                       DI  V  QE+         
Sbjct: 165 VGTYNVNGQSPTESLQPWLRCD---------------AEPPDIYCVGFQELDLTKEAFFF 209

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    +     +             I     V+ +    + +          
Sbjct: 210 NDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKAELALNISEVEVETVGTGI 269

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+ AV +  + +   + +++ HL +        N          Q  Q   +   
Sbjct: 270 MGRMGNKGAVAIRFKFHNTSVCIVNSHLAAHTEEYERRNQDFKDICSRMQFCQSDPNLPP 329

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N ++  L                    D   + +  N +   F +
Sbjct: 330 LTIGKHDVILWLGDLNYRLEELDVAKVKQLVEEKAFLELCQYDQLKRQMKANAAFEGFTE 389

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + S     K              R     D  +        L   S             
Sbjct: 390 GEISFQPTYKYDAGSDDWDTSEKCRVPAWCDRILWKGQRVAQLSYRSH------------ 437

Query: 288 RGKRLSDHCPISIDYD 303
              +LSDH P+S  +D
Sbjct: 438 MALKLSDHKPVSSVFD 453


>gi|164661667|ref|XP_001731956.1| hypothetical protein MGL_1224 [Malassezia globosa CBS 7966]
 gi|159105857|gb|EDP44742.1| hypothetical protein MGL_1224 [Malassezia globosa CBS 7966]
          Length = 461

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 64/206 (31%), Gaps = 7/206 (3%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A++VRLVSWN+   S         +   +  +    +     + D D+   QE+ S N +
Sbjct: 57  ARRVRLVSWNMLAQSLVRRELFPGSDCLKLKTRLPGIVAEMTSHDNDLGCFQEVDSINEI 116

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI------AVRKKNVRVLQQSYPLLGAK 134
                +  +   Y                   +        V KK VR+           
Sbjct: 117 VPSIRQAGFDFVYERGYEEKKHGLMIMWKTKASTRATFESPVWKKVVRLDDVDKWGDTVD 176

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                   R  + ++          + +      +        +   +++ ++   L+  
Sbjct: 177 GPSLSRCTRNILLIVALPFSSGPGGIIVATTHLFWHPRYGYERARQAAVIMRELSSLRA- 235

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGN 220
            +Q+  S  P V+AGD N + +    
Sbjct: 236 ASQEDWSSWPIVLAGDLNDQPHSSTY 261


>gi|328873291|gb|EGG21658.1| putative sphingomyelinase [Dictyostelium fasciculatum]
          Length = 578

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 85/315 (26%), Gaps = 77/315 (24%)

Query: 65  DADIVFLQEMGSYNAVA--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
             DI+ LQE+ S  +    +   K     F  +          +   +   I V  K+  
Sbjct: 261 QFDIICLQELFSAFSFRQKRFIEKAKKQNFLYSATSPLPRLLRTTFLVDGGIVVLSKHPI 320

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEI-------NGKKIWVLDIHLKSFCFLDSLE- 174
           V  +        DS   A ++ A+   ++I         + I +   HL++       + 
Sbjct: 321 VKTEYLQFKQGVDSDMLA-SKGALYTKIQITRDDGTPGSEYIHLFSTHLQASYNPSQEQL 379

Query: 175 -----NTYSPSCSLLSQQAQWLKDWITQKKESL-VPFVIAGDFN--------RKINYLGN 220
                     + S+ + Q   L+D+I +  +S   P ++AGD N                
Sbjct: 380 QKGGGRDNQMNDSVRTIQLNQLRDFIIEMTKSDSYPVILAGDLNVDGKGSKTDPTKDSKE 439

Query: 221 NDDFWKTID------PNDSLIRFPKEKDSR------------------------------ 244
             +    +        ++   +  ++                                  
Sbjct: 440 YQEMIAYLSRVPPTGDDEPQQQQQQQATPPQGGKKVYKIADLLKEDVGCHPATVGDTIGL 499

Query: 245 -----------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI-LYNEDDIKSRGK-- 290
                       + N     K  +DY  +          +          +     G   
Sbjct: 500 AQNSIPRETCLTHPNDYGCLK-RLDYIFLMDRVNDTTTTDECRVKGTTKVEPFFIEGFPF 558

Query: 291 -RLSDHCPISIDYDF 304
            +LSDH  +S +  F
Sbjct: 559 TQLSDHYGVSTNLQF 573


>gi|115933321|ref|XP_780987.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115949269|ref|XP_001188462.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 442

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 89/318 (27%), Gaps = 56/318 (17%)

Query: 23  KVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMGS-- 76
           ++R+   +WN+         ++ +        D   ++        D  I  LQE+ S  
Sbjct: 3   ELRICVSTWNV---------AIQEPPPIEAFKDIIWIQ---TQNAPDMYIWGLQEVSSKP 50

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRVLQQSYPLLGA 133
           +  +   F  + W    S+          ++  +   +    VR  ++  +      L  
Sbjct: 51  HEFIQSAFSDDPWTEVISSIVCPKGYVMINSVRLQGLVILLYVRMPHLPFIHNVQTALTR 110

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                  GN+ AV +  +  G+ I +L++HL                   +    Q    
Sbjct: 111 TGLGGVWGNKGAVTIRFDCYGRSICLLNVHL---SPHQDGWEKRDKEFQTIIS-TQEFPQ 166

Query: 194 WITQKKESLVPFVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSLIR 236
             T         +  GD N +I  L                    D    ++    +   
Sbjct: 167 CNTSSILDHDYVMWFGDLNYRIEDLSTEAIKFLASPKKLHVLLEKDQLLNSMRKKKAFNG 226

Query: 237 FPKEKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
           F +   +     K              R+    D  +   N    + Q   S    +   
Sbjct: 227 FHEGLITFMPTYKFDLKSNEYDTSPKQRSPAWTDRILWKVNLRASIDQNYLSITQLSYHA 286

Query: 285 IKSRGKRLSDHCPISIDY 302
                   SDH P+S ++
Sbjct: 287 HSDILW--SDHRPVSAEF 302


>gi|2072972|gb|AAC51276.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 71/292 (24%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITIVTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|15602940|ref|NP_246012.1| hypothetical protein PM1075 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721412|gb|AAK03159.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 365

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/248 (11%), Positives = 58/248 (23%), Gaps = 45/248 (18%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L    +    D+V   E        K+        +     L N           
Sbjct: 119 RQVHKLLSLIEQWQPDVVLTLET-DLWWEEKLASLEAHYTYTVKIPLDNL---------- 167

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +    +                     +G+ I +  +H       +
Sbjct: 168 YGMHLYSRLPLRNTEIRHWVQEDIPSIYTEACLP-------SGEWIHLYCLHPMPPTPTE 220

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           S  +T   +  LL  Q         +   +    ++ GD N       +    ++     
Sbjct: 221 SATSTQRDAELLLVGQ---------EISNNNQSVLVFGDLNDVAWSTTSR--LFQKTS-- 267

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L              K    + P+D+     +                  DI+   + 
Sbjct: 268 GLLDPRVGRGLYSTFHAKYPFLRWPLDHIYHSNDFMMR--------------DIRVLSEI 313

Query: 292 LSDHCPIS 299
            SDH P+ 
Sbjct: 314 GSDHFPVY 321


>gi|317061304|ref|ZP_07925789.1| LOW QUALITY PROTEIN: metal-dependent hydrolase [Fusobacterium sp.
           D12]
 gi|313686980|gb|EFS23815.1| LOW QUALITY PROTEIN: metal-dependent hydrolase [Fusobacterium sp.
           D12]
          Length = 199

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/213 (10%), Positives = 59/213 (27%), Gaps = 29/213 (13%)

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
                       +     I++  ++  + + ++       +     +R+ V++ +EI G+
Sbjct: 8   YEYFWSHSHIGFDIYEEGISLLSRHPILEKDAF-YCTDSQTIHSISSRKIVKITLEIEGE 66

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK- 214
           KI     H+      +                       I +  +     ++ GDFN   
Sbjct: 67  KIEFYSCHMNLPDCREEKMEKN--------------IQTILKHSDKDCLKILMGDFNTDA 112

Query: 215 -INYLGNNDDFWKTIDPND-SLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFL 270
             +         + +  +               N +    ++    +DY  +++      
Sbjct: 113 VHDKSSYQKIINQGLFDSYVLAKEKDDGITVHKNISGWEDSREEKRLDYIFLNKGRKVLS 172

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               F+   Y           +SDH  + +   
Sbjct: 173 SFVIFNGKNYPC---------ISDHSGVEVILS 196


>gi|255026927|ref|ZP_05298913.1| hypothetical protein LmonocytFSL_12426 [Listeria monocytogenes FSL
           J2-003]
          Length = 178

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 61/200 (30%), Gaps = 43/200 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y +  DADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFEEADADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +++ ++  +                        + +++    ++  
Sbjct: 91  -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDNTK 137

Query: 204 PFVIAGDFNRKINYLGNNDD 223
           P V+ GD N     +   + 
Sbjct: 138 PVVLCGDLNVAHEEIDLKNP 157


>gi|156838338|ref|XP_001642876.1| hypothetical protein Kpol_1007p2 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113453|gb|EDO15018.1| hypothetical protein Kpol_1007p2 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 529

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/368 (10%), Positives = 88/368 (23%), Gaps = 104/368 (28%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +R VS+N+N +        +    +   + +          DAD++  QE+ +    
Sbjct: 13  SDAIRFVSFNVNGVRTLFHYQPFSQMNQSLKASFEY-------FDADVITFQELKTEKYG 65

Query: 81  AKVFP--KNTWCIFYSTERLINHSKRDS----------------------NNDIHTAIAV 116
              +    + +           +S                              +  + V
Sbjct: 66  ISKWGKVDDFYSFISIPSNKKGYSGVGCWVRKPEKDHPLYEALKVVKAEEGITGYLTVKV 125

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV---LDIHLKSFCFLDSL 173
             K VR    +   +G  +S           L ++  G+ + V    +I + +     + 
Sbjct: 126 GGKEVRYKDDTSQGIGGYESLGLDETNDDEALTLDSEGRCVVVELACNIVVFNVYCPAN- 184

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------- 216
                       +  + L   I   K      V+ GD N   +                 
Sbjct: 185 SGQTDDGQLFRLKYLKVLYKRIRNLKALGKNIVLMGDINSCRDLIDQAEALEANMIQITS 244

Query: 217 ----------------------YLGNNDDFWKTIDP--------NDSLIRFPKE--KDSR 244
                                          + +          +  L+   +      R
Sbjct: 245 TTTGEDIEEKYSQLAYEFVMNPEAPQRRMLNQMLTDSIIPGISQDGILVDTTRYVQTKKR 304

Query: 245 CNANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                ID+ ++ +    +++Q                    SDH
Sbjct: 305 LKMYTVWNTLKNTRPVNYGSRIDFILLSKELQDYILQADIL-----------PDVMGSDH 353

Query: 296 CPISIDYD 303
           CP+ +D D
Sbjct: 354 CPVYLDID 361


>gi|74143952|dbj|BAE41277.1| unnamed protein product [Mus musculus]
          Length = 375

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 66/203 (32%), Gaps = 20/203 (9%)

Query: 27  VSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +   +
Sbjct: 1   MSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTE 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P      ++   ++              AI  +     +L  +      +D      +
Sbjct: 61  IRPSLESLGYHCEYKMKT-----GRKPDGCAICFKHSRFSLLSVNPVEFCRRDIPLLDRD 115

Query: 143 RRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              + LL++          I + + HL                 + L+     + +   +
Sbjct: 116 NIGLVLLLQPKIPRAASPSICIANTHLLYNP------RRGDIKLTQLAMLLAEIANVTHR 169

Query: 198 KKESLVPFVIAGDFNRKINYLGN 220
           K  S  P V+ GDFN        
Sbjct: 170 KDGSSCPIVMCGDFNSVPGSPLY 192


>gi|83718570|ref|YP_440771.1| hypothetical protein BTH_I0213 [Burkholderia thailandensis E264]
 gi|83652395|gb|ABC36458.1| conserved hypothetical protein [Burkholderia thailandensis E264]
          Length = 230

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 55/263 (20%)

Query: 57  LRQYAKNLDADIVFLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLIN 100
           +R + ++  ADI FLQE  +                      ++      I ++ +  I 
Sbjct: 1   MRNWVESTHADIYFLQEAMARRMPRPVLASGFGTPMTEPADDIWHCQATEIAHALDWQIA 60

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWV 159
                         A+   +   L   + +        R   R  +     + G   + +
Sbjct: 61  LGPNVFKPSWRHGNAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLGGGAPVTL 115

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           L  HL                 +   +Q  W+  WI +   +  P V+AGDFN   N   
Sbjct: 116 LCAHLALT-------------RAARLRQMHWIAHWIERNAGAG-PLVLAGDFNDWRNDSI 161

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                   +     L                    + +D   +                 
Sbjct: 162 P-------LFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRGMTPLEWRAPG----- 209

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
                       LSDH P     
Sbjct: 210 -------DETAWLSDHLPYVARL 225


>gi|42571707|ref|NP_973944.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|332193242|gb|AEE31363.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana]
          Length = 283

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 62/224 (27%), Gaps = 30/224 (13%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            RLVS+NI      +   +     +  +  +    +    KNL AD   LQE+  Y++  
Sbjct: 58  FRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYDSFY 117

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +    +        +R     +         + A      R+           DS S + 
Sbjct: 118 RNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCSE 177

Query: 142 NRR----------------------------AVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            +                              +     IN     ++ +      +   L
Sbjct: 178 QKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLYWDPEL 237

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            +        L  +    K  I+ + E     ++AGDFN     
Sbjct: 238 ADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGD 281


>gi|123385824|ref|XP_001299171.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3]
 gi|121879954|gb|EAX86241.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3]
          Length = 467

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/314 (10%), Positives = 83/314 (26%), Gaps = 81/314 (25%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +       A  +++ + N  +L    G                 L  +A     D++ +Q
Sbjct: 1   MSTTQTDAAPPLKISTINAASLRAAWGKG---------------LHDWALASKPDVICIQ 45

Query: 73  EMGSYNAVAK---VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           E   +         F  + +  ++                I             +++S+P
Sbjct: 46  ETKMHETSQPNIGAFLLDGYQGYFFDCNKPGFHGTAIYTKIK---------PISVKESFP 96

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
               +               + +     ++++ ++ +                 +     
Sbjct: 97  DDEGR--------------SITMEFSNFYLINSYVPNAG------QKLEKLTYKIETWNP 136

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDS 233
            LK+++ +        +  GD N     +   D                 F K ++   +
Sbjct: 137 HLKEYLDE-LSKTKAVIWTGDLNVAHEEIDIFDPKGKDKTAGYTPQEREWFHKFLESGYT 195

Query: 234 LIRFPKEKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            I   +  D +  +            N   +DYF+M          ++        +D  
Sbjct: 196 DIFRKRYPDKKEFSFYTYRGQAKAKGNGWRLDYFIM----------DNAHYKDELVNDCA 245

Query: 287 SRGKRLSDHCPISI 300
                 SDH P+S+
Sbjct: 246 METGDFSDHVPVSL 259


>gi|119715693|ref|YP_922658.1| hypothetical protein Noca_1457 [Nocardioides sp. JS614]
 gi|119536354|gb|ABL80971.1| hypothetical protein Noca_1457 [Nocardioides sp. JS614]
          Length = 341

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 62/246 (25%), Gaps = 28/246 (11%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A +  + S N+            K            L +  +  D D++ LQE  +    
Sbjct: 63  ATQFTISSLNVLGADHTAAGGNRKGWAS-GEQRMRWLTKVIQAKDVDVLGLQEFQNPQYR 121

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   +    +               +  ++A +     ++  S+  +     F   
Sbjct: 122 -------VFLEETAGSYATYPGLLWGKKGMRNSVAWKVDEWELVSASWVKIPY---FHGT 171

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ-WLKDWITQKK 199
             R  V LL  +              F    +  +   P+     Q     +      + 
Sbjct: 172 ILRMPVVLLRNLQSG-------QQAYFSSFHNPADARGPAAKWRKQATDIEIALVNRLRA 224

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           ES +P  + GD N         D ++  +     ++      +              ID+
Sbjct: 225 ESGLPVYVTGDMN-------ERDVYYCRMTSGTDMVSANGGMNDGR--TCAPTRPTFIDW 275

Query: 260 FVMDQN 265
                 
Sbjct: 276 IFGSPE 281


>gi|270009978|gb|EFA06426.1| hypothetical protein TcasGA2_TC009305 [Tribolium castaneum]
          Length = 1118

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 35/146 (23%), Gaps = 36/146 (24%)

Query: 181  CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------------NNDDFW 225
                    +  + +I    +S  P +I GD N     +                   D  
Sbjct: 983  LPKRLDWNEQFEKFIK-NLDSQKPVIICGDMNVAHKEIDLANPKTNTNSAGFSVEERDGM 1041

Query: 226  KTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFS 276
                 N  +  +      +  A                  +DYF++ Q     +      
Sbjct: 1042 TAFLGNGYVDIYRHLYPEKEKAYTFWIYMRNARPNNVGWRLDYFLVSQRFVDNVCDNIIH 1101

Query: 277  EILYNEDDIKSRGKRLSDHCPISIDY 302
                            SDHCP+S+  
Sbjct: 1102 -----------SDVMGSDHCPLSLHI 1116


>gi|182680284|ref|YP_001834430.1| endonuclease/exonuclease/phosphatase [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636167|gb|ACB96941.1| Endonuclease/exonuclease/phosphatase [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 349

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 82/320 (25%), Gaps = 77/320 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76
            +R+ +WN+                              +   ADI  L EM +      
Sbjct: 62  SLRVAAWNLERC-----------------KHVEASEALLRRSGADICLLSEMDNGMARSS 104

Query: 77  -----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQ 126
                     K+     + + +    L    + +              A+          
Sbjct: 105 NLHTTRELAKKLGTGYLFGVEFIEFGLGTPEEEERFKGQKNILGLHGNAILSPLPMRDNA 164

Query: 127 SYPLLGAKDSFS------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             PL      +       R G R A+   +E     I  +  H ++    +         
Sbjct: 165 LLPLDDGTIWYGLNWHHRRIGGRNAILTSIECAHMNILFISTHFETLTKPEG-------- 216

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------------RKINYLGNNDDFWK 226
                 Q   + + + ++ ++    VIAGDFN                       +  + 
Sbjct: 217 ---RRAQIDLILEELAKRGQAD-HVVIAGDFNTATLPDIDGMASHPDWFEAPEIFEPMFT 272

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEILYNED 283
           ++           ++        + R       ID+F       K L   +       ++
Sbjct: 273 SLREAGFEWLRGNDRGQTRRRLDDGRPPPVLRRIDWFF-----TKGLEVSNPQIWPAVDE 327

Query: 284 DIKSRGKRLSDHCPISIDYD 303
                G  LSDH  IS+D  
Sbjct: 328 ----AGNPLSDHEMISLDIS 343


>gi|284800613|ref|YP_003412478.1| hypothetical protein LM5578_0360 [Listeria monocytogenes 08-5578]
 gi|284993799|ref|YP_003415567.1| hypothetical protein LM5923_0359 [Listeria monocytogenes 08-5923]
 gi|284056175|gb|ADB67116.1| hypothetical protein LM5578_0360 [Listeria monocytogenes 08-5578]
 gi|284059266|gb|ADB70205.1| hypothetical protein LM5923_0359 [Listeria monocytogenes 08-5923]
          Length = 217

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 51/199 (25%), Gaps = 23/199 (11%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + ++NI                K      TL +        D + ++E      +  +
Sbjct: 2   FSVTTFNIRFDDTS-------ERKKSWELRKTLTKSLLDKYQWDFMGVEEPLLPQ-MRDM 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W  F             +    ++      +         P + +  S +    R
Sbjct: 54  KEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVPSIHSTAM-FPR 112

Query: 144 RAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             V     + +GK+ ++ + HL                       A  L           
Sbjct: 113 ICVWGKFADSDGKQFYIFNTHLDHIS-------------EEARLFASQLLLKKAATIAEN 159

Query: 203 VPFVIAGDFNRKINYLGNN 221
            P +I GDFN + +    N
Sbjct: 160 SPVIILGDFNTEPDTPTYN 178


>gi|237807541|ref|YP_002891981.1| Endonuclease/exonuclease/phosphatase [Tolumonas auensis DSM 9187]
 gi|237499802|gb|ACQ92395.1| Endonuclease/exonuclease/phosphatase [Tolumonas auensis DSM 9187]
          Length = 281

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 74/282 (26%), Gaps = 64/282 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             R+ SWN+N               KR+                D++ LQE     A+ +
Sbjct: 56  TFRITSWNMNKFQRAGWQQELNAWAKRS----------------DLLLLQEAMERPALHQ 99

Query: 83  VFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +  ++ +        RL   +    N     A+              P       +   G
Sbjct: 100 LLQQSHFNWLQLQAFRLEGEATGVVNAAPAAALYNCSLREPEPVSRLPKSTLLTLYPLDG 159

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +   + + V ++G    +                      +   +Q   L     +    
Sbjct: 160 SSYPLLV-VNVHGVNFEL--------------------GMAAYRRQMTRLFHLAKRYPG- 197

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P V+AGDF    N   +           D +I  P  +              P+D+  
Sbjct: 198 --PTVLAGDFAAWGNKRSHYLLQLAQQSGFDEVIPAPDVRL--------RVLSEPVDHIF 247

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +   +    +S                  SDH P+  ++ 
Sbjct: 248 YRKLNLQQSESKSTH---------------SSDHNPLWAEFS 274


>gi|126660414|ref|ZP_01731524.1| hypothetical protein CY0110_01310 [Cyanothece sp. CCY0110]
 gi|126618280|gb|EAZ89039.1| hypothetical protein CY0110_01310 [Cyanothece sp. CCY0110]
          Length = 125

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 10/86 (11%)

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-------- 280
           D        P     R  +     N   ID+ ++ +        ++     +        
Sbjct: 39  DDARLFNLAPLIPPKRRFSRVFRGNGELIDHILVSKELLPGNPPQTPVVDSHIDGLGSLP 98

Query: 281 --NEDDIKSRGKRLSDHCPISIDYDF 304
             +E   + RG+  SDH PI+  +DF
Sbjct: 99  SISEQPSQRRGEPGSDHAPITATFDF 124


>gi|302843683|ref|XP_002953383.1| hypothetical protein VOLCADRAFT_118317 [Volvox carteri f.
           nagariensis]
 gi|300261480|gb|EFJ45693.1| hypothetical protein VOLCADRAFT_118317 [Volvox carteri f.
           nagariensis]
          Length = 705

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 70/208 (33%), Gaps = 30/208 (14%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQE--MGSYNAV 80
           +R+++WNIN L              R  + +  L++  + L   D+V  QE  +   +  
Sbjct: 3   LRVLTWNINGLR-------------RVVAVFGGLQRLLEALAPADVVCFQETKLTRVDLQ 49

Query: 81  AKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVR-----KKNVRVLQQSYPLLGAK 134
            ++   + W  F++  R    +S   +      A+ +         + +  +        
Sbjct: 50  RELALADGWESFFAFTRGKVGYSGVATFCRRDRALPLHAEEGFTGVLHLTSEGLHPRWQA 109

Query: 135 DSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              S    R       +++  +G    +++++  +       E       S   Q  + L
Sbjct: 110 AGCSPEQLRNLDGEGRVVITDHGG-FVLVNVYGPAITS----EERAEERMSYKLQFYRAL 164

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLG 219
           +  +          ++ GD N   +Y+ 
Sbjct: 165 QLRLDGFLAEGRRVLLVGDLNIAPDYMD 192


>gi|256083628|ref|XP_002578043.1| hypothetical protein [Schistosoma mansoni]
 gi|238663392|emb|CAZ34281.1| expressed protein [Schistosoma mansoni]
          Length = 898

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/378 (9%), Positives = 90/378 (23%), Gaps = 94/378 (24%)

Query: 21  AQKVRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +Q +R+VS+NI          +          +   +     L+ +   +  +D + LQE
Sbjct: 513 SQHLRVVSYNILAEMYARSDFARAHIFKHCPEACISSAYRLPLILRELFSYQSDFICLQE 572

Query: 74  MGSYNAVAKVF----------------------PKNTWCIFYSTERLINHSKRDSNNDIH 111
           +  +     +                       P +   +   TE+              
Sbjct: 573 VDRWVYDKYLLNALRSYRNMDGIFLAKRAVITDPNDPTKVKVDTEKEKGEGCAIFYCRTR 632

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN----RRAVELLVEINGKKIWV---LDIHL 164
             +        +L  +  +       +   +      +          +  +   L   L
Sbjct: 633 FELVSECGLPSILHYASNVPFLSTMLNNFNSTTLSHGSTGHSFGEENTETHIQKSLSQCL 692

Query: 165 KSFCF--------------LDSLENTYSPSCSLLSQQAQWLKDWITQ------------- 197
            S  F               ++    +  +  +   QA+ ++ ++++             
Sbjct: 693 ISGVFREKSTTSQSPLLIVSNAHFYFHPSASPIRIIQARTVRHYLSKLAMGYRQSMVPLI 752

Query: 198 ------KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------PKEKDSRC 245
                      +P V  GD N+                P+D  + +          +   
Sbjct: 753 FLSFHVHFSKPIPIVFCGDINQCPGSDVYTALTQGNGFPSDDEVAYQPIFESAYVNNPPE 812

Query: 246 NANKNLRNKIPIDYFVMD-------------------QNAYKFLIQESFSEILYNEDDIK 286
             N        +D  + +                   +     LI      +  +     
Sbjct: 813 FTNWVPGFHNVLDVILYNTDSDLKCIHVLPIDPLQKIKELLTQLINADGQSVPDSSQLGL 872

Query: 287 SRGKRLSDHCPISIDYDF 304
                 SDH  +  D+ +
Sbjct: 873 PNAYFPSDHIALVADFSW 890


>gi|229818301|ref|ZP_04448582.1| hypothetical protein BIFANG_03601 [Bifidobacterium angulatum DSM
           20098]
 gi|229784171|gb|EEP20285.1| hypothetical protein BIFANG_03601 [Bifidobacterium angulatum DSM
           20098]
          Length = 354

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/291 (9%), Positives = 62/291 (21%), Gaps = 48/291 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                 A+ +R+++ N                     +D   + +  +    D++  QE 
Sbjct: 108 ATEPRTARSLRVMTVNCRY----------------GRADAHAIVREVRQRHIDVLATQET 151

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                   +  +       S          R ++N  + A+  R +  R       +  A
Sbjct: 152 TD-----DLVERLREAGLDSLLPHRQLGTSRPTDNGGYNALFSRFEPSRSAANLIDIPAA 206

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                      + ++    N +   V                     C   S   + L  
Sbjct: 207 DVPSMTVDLPTSADMQSTGNTRAYHVTLASAHPKSP--------MRGCPEWSAGIRGLSA 258

Query: 194 WITQKKESLVPF-VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                +       V+ GD N  I +          +                        
Sbjct: 259 IADLAEREPNGIGVVMGDLNSSIEHPSFRSLLANGLHDASRTQATHAVVTFPSWLTWPHI 318

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +D+ +                  +  D          DH  ++    
Sbjct: 319 E---LDHVLFTNGL------CPSKVESFRIDGT--------DHYALTATLT 352


>gi|290990899|ref|XP_002678073.1| predicted protein [Naegleria gruberi]
 gi|284091684|gb|EFC45329.1| predicted protein [Naegleria gruberi]
          Length = 314

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 77/300 (25%), Gaps = 45/300 (15%)

Query: 33  TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCI 91
                   +   + + R       L     +  ADI+ LQE+  Y     +   KN +  
Sbjct: 11  YFPHLSDTTEILSWINRKH----RLLDEFLSYHADIICLQEVDRYGDHWRERLLKNGYES 66

Query: 92  FYSTERLINHSKRDSNND-------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            Y+           +            T  +  + + +       +  +        N  
Sbjct: 67  TYTQRTGGKPDGCATFWKSEKFETRQITKNSELETHEKCDLNGNVVTSSNSISKFLTNNV 126

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           A   L++    +  V  ++L  F      E         +    +  KD++T      + 
Sbjct: 127 ANLTLLKHRSSEKLVCVVNLHLFWDPSFPEVK----LCQIFYTMKQTKDYLTSLSLEDIQ 182

Query: 205 FVIAGDFNRKINYLGNNDDFWKTI------DPNDSLIRFPKEKDS--------------- 243
               GD+N   +          +I      + +       +  +                
Sbjct: 183 IFFCGDYNSMPDSEVYEFLTKDSISLVECENDDGEKTFKHQITNPFGTATSLYKAVCGDE 242

Query: 244 RCNANKNLRNKIPIDYFVM-----DQNAYKFLIQESFSEIL---YNEDDIKSRGKRLSDH 295
               N     K  +DY +             L+  +   +     +E +     K  SDH
Sbjct: 243 PTFTNYTKNFKGCLDYVMACNYPTSGEEKGILVSRALQILTEEQASEFEALPSIKNASDH 302


>gi|118474325|ref|YP_891236.1| cytolethal distending toxin [Campylobacter fetus subsp. fetus
           82-40]
 gi|118413551|gb|ABK81971.1| cytolethal distending toxin [Campylobacter fetus subsp. fetus
           82-40]
 gi|133251685|dbj|BAF49146.1| cytolethal distending toxin B [Campylobacter fetus]
 gi|133251692|dbj|BAF49149.1| cytolethal distending toxin B [Campylobacter fetus]
 gi|133251701|dbj|BAF49152.1| cytolethal distending toxin B [Campylobacter fetus]
 gi|133251707|dbj|BAF49155.1| cytolethal distending toxin B [Campylobacter fetus]
 gi|133251729|dbj|BAF49164.1| cytolethal distending toxin B [Campylobacter fetus]
 gi|133251737|dbj|BAF49167.1| cytolethal distending toxin B [Campylobacter fetus]
          Length = 266

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 89/311 (28%), Gaps = 67/311 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  ++ +    +    +  +  ++ +WN+   S         +           +RQ  
Sbjct: 1   MRNVIMIIFIATLGF--AKPEDYKIATWNLQGSSAITESKWNIS-----------VRQII 47

Query: 62  KNLDA-DIVFLQEMGSYNAVAK-----------VFPKNTWCIFYSTERLINHSKRDSNND 109
              +  DI+ +QE G+    A            +  ++ W +   +     +      + 
Sbjct: 48  SGENPADILAVQEAGNLPQTALPTGRSINQGGTIVTEHLWQLGSISRPFQVYIYYAQIDT 107

Query: 110 I--HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 +A+  +         P            +R  + + +  +       +IH  + 
Sbjct: 108 GANRVNLAIVSRIKADEIIILPPPTVA-------SRPLIGIRIGND----VFFNIHALAN 156

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
             +D+     S      +                 + ++I GDFNR             T
Sbjct: 157 GGVDAPAIINSVFDRFRNM--------------PNITWMILGDFNRSPES------LRGT 196

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +     +        +        R+   +D+ ++  +A   +     + ++        
Sbjct: 197 LGLETRVRVTFLAPPAPT-----QRSGGTLDWAIVGNSAGDLVRTTLVAVLMLANLRT-- 249

Query: 288 RGKRLSDHCPI 298
               +SDH P+
Sbjct: 250 --HLVSDHFPV 258


>gi|108797902|ref|YP_638099.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS]
 gi|119866997|ref|YP_936949.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS]
 gi|108768321|gb|ABG07043.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS]
 gi|119693086|gb|ABL90159.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS]
          Length = 330

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 72/292 (24%), Gaps = 55/292 (18%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F   P +      +R++S N+          +   S  R             N  AD++ 
Sbjct: 85  FLGSPPSVERHTDIRVLSSNLR------KSRVEPTSFVR-----------LANRSADVIT 127

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           + E+ +   V +         F  +                            L   +PL
Sbjct: 128 VSEL-TPEGVRRFDHAGLGETFPYSVLKPASGAGGIG----------------LWSRFPL 170

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             +  S  R      V   ++I G +   L   +     L    N +      ++     
Sbjct: 171 TPSPPSKYRDTT--IVAAKLKIPGARSDALVASVHVTSPLSIGLNIFDDWRRGITGLKAS 228

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L D+           ++AGDFN   +     D                        +   
Sbjct: 229 LNDFAKT--AGAGAVIVAGDFNSTPDMRQFRDLLTNGYRDAVEQTGA--GLGPTFPSYGW 284

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            R  I ID+ +    A   +                    + SDH  +    
Sbjct: 285 FRPLITIDHVLTRNAAASSIKTV---------------DMKGSDHRALLATI 321


>gi|313224629|emb|CBY20420.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 90/307 (29%), Gaps = 47/307 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R +++N+      E       +          L          I+ +QE+     V  +
Sbjct: 5   IRTITFNV----ADENPPSDVPAALLGEHTEEELPDIF------ILAMQEVNLGLQVGAL 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLLGAKDSFSR 139
              ++W    S   L     R  +  +   +      R    +        +G       
Sbjct: 55  LFWDSWTSAMSEFLLKKGYYRIESIRMQGIVLSVFGKRSLLPQFRDVRCDWIGTGQLGFW 114

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            GN+ AV + +++ GK   +++ HL       S       S   +    ++    + +  
Sbjct: 115 -GNKGAVAIRLKLFGKTFALINSHLPHGT-DTSQYKQRLLSIDKIFNCIKF--ADLDKSI 170

Query: 200 ESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDSLIRFPKEKD 242
                 +  GD N +I+ +                    D+    +  +  + +F + + 
Sbjct: 171 LDHDVVLFQGDLNFRISNVTREEVLQHLDAKEKSQCLKADELNSLLKSHSIISQFSENQI 230

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR------LSDHC 296
                 K  +     D      ++ K         ILY   D +           +SDH 
Sbjct: 231 VFNPTYKYDKRSKNYD------SSTKKRKPAWTDRILYKSKDFECHNYDEINEVLVSDHR 284

Query: 297 PISIDYD 303
           P+  D+ 
Sbjct: 285 PVFADFS 291


>gi|260574139|ref|ZP_05842144.1| conserved hypothetical protein [Rhodobacter sp. SW2]
 gi|259023605|gb|EEW26896.1| conserved hypothetical protein [Rhodobacter sp. SW2]
          Length = 316

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 81/316 (25%), Gaps = 60/316 (18%)

Query: 44  KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV--------FPKNTWCIFYST 95
           ++ +K          Q    LDAD++ L  +     +  +             +   ++ 
Sbjct: 3   RDILKGDDPQIAAAVQVVTALDADVLVLTAVDYDLDLVALSAFADLLAQAGAPYPYRFAL 62

Query: 96  ERLINHS-----------------KRDSNNDIHTAIAVRKKNVR----------VLQQSY 128
                 +                 +          +AV  +              L +  
Sbjct: 63  RPNTGRATGLDLDGNGFPGDARDAQGYGRFAGEAGMAVLSRLPIDTASARDFSGFLWRDL 122

Query: 129 PLLGAKDSFSRAG-NRRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           P     D F  A   R +     E+      G+ + +L  +     F    +     +  
Sbjct: 123 PGALLPDPFPGAEIQRLSTTGHWEVPVTLPDGRNLALLVWYATPPIFDGPEDRNGRRNHD 182

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPKEK 241
             +  A+ +   +     +  PF++ GD N    +  G        +         P+  
Sbjct: 183 EAAFWARLIDGALPFPAPAT-PFILLGDANLDPVDGDGLTAGIAGLLAHPALQDPGPRGT 241

Query: 242 DSRCNANK-------NLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             R +  +                     +DY +   +     +  S        D + +
Sbjct: 242 SGRVDPGQQGDAALDTADYTADAGPGGLRVDYILPSVDLT---VTGSGVLWPPESDPLAA 298

Query: 288 RGKRLSDHCPISIDYD 303
                S H P+ ++ +
Sbjct: 299 TLAAASRHRPVWVEIN 314


>gi|133251716|dbj|BAF49158.1| cytolethal distending toxin B [Campylobacter fetus]
 gi|133251724|dbj|BAF49161.1| cytolethal distending toxin B [Campylobacter fetus]
          Length = 266

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 90/311 (28%), Gaps = 67/311 (21%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  ++ +    +    +  +  ++ +WN+   S         +           +RQ  
Sbjct: 1   MRNVIMIIFIATLGF--AKPEDYKIATWNLQGSSAITESKWNIS-----------VRQII 47

Query: 62  KNLDA-DIVFLQEMGSYNAVAK-----------VFPKNTWCIFYSTERLINHSKRDSNND 109
              +  DI+ +QE G+    A            +  ++ W +   +     +      + 
Sbjct: 48  SGENPADILAVQEAGNLPQTALPTGRSINQGGTIVTEHLWQLGSISRPFQVYIYYAQIDT 107

Query: 110 I--HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 +A+  +         P            +R  + + +  +       +IH  + 
Sbjct: 108 GANRVNLAIVSRIKADEIIILPPPTVA-------SRPLIGIRIGND----VFFNIHALAN 156

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
             +D+     S      +                 + ++I GDFNR            + 
Sbjct: 157 GGVDAPAIINSIFDRFRNM--------------PNITWMILGDFNRSPES-------LRG 195

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
               ++ +R               R+   +D+ ++  +A   +     + ++        
Sbjct: 196 TLGLETRVRVTFLTP----PAPTQRSGGTLDWAIVGNSAGDLVRTTLVAVLMLANLRT-- 249

Query: 288 RGKRLSDHCPI 298
               +SDH P+
Sbjct: 250 --HLVSDHFPV 258


>gi|315227041|ref|ZP_07868828.1| conserved hypothetical protein [Parascardovia denticolens DSM
           10105]
 gi|315119491|gb|EFT82624.1| conserved hypothetical protein [Parascardovia denticolens DSM
           10105]
          Length = 373

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/248 (9%), Positives = 62/248 (25%), Gaps = 39/248 (15%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A     V +++ N                     +D + +    +    D++ +QE+  
Sbjct: 133 AAGQTASVTVMTLNGRY----------------GRADASSIVHAVEQNHVDVLCMQEV-- 174

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 +  +       +        +   N++     A+  +   V      L  A  +
Sbjct: 175 ---TEDLVKRLDQDGLTARLPYSQLGESGENDNGGF-NAIWTRQAPVESHPASLPIASSN 230

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                        + +  + +     H  S             S          L + + 
Sbjct: 231 VPT--------ATIFVGNQPVLFASAHPMSPGRGGQAWQQSLSSLGAFG----RLNNPLL 278

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             +  +   V+ GD N  +++    D     +  +   +    +  +             
Sbjct: 279 ANRTQVTSQVVMGDLNSNLHHTALRDVLKAGLTDSGYQL---HKGMNLSFPASWPLFPAL 335

Query: 257 --IDYFVM 262
             ID+ + 
Sbjct: 336 IEIDHVLY 343


>gi|118096073|ref|XP_429344.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 662

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 88/304 (28%), Gaps = 75/304 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD--SNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +      Y    +  +      S   +++ +    +   
Sbjct: 361 NLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYGCHACCSFKFVNSGLLFASRYPV 420

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +    +     K + S A ++ A+ L V++         +   S   L ++        +
Sbjct: 421 MDAAYHCYPNGKGTDSLA-SKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDT----T 475

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNN--------- 221
           +  +Q   L+DW+++ ++S                VI GD N       +          
Sbjct: 476 VRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSEDKLEQQHSLFT 535

Query: 222 -----------------------------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                                              D+  K ++  +    +     S+ +
Sbjct: 536 HYKDPCRIGPGEDKPWAIGTLLDPEGLYDEEVFTPDNLQKVLESEEGRKGYLVYPTSKNH 595

Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           ++     K         IDY +  +       +    E  +           L+DH P++
Sbjct: 596 SSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLA-----GLTDHLPVA 650

Query: 300 IDYD 303
           +   
Sbjct: 651 MRLT 654


>gi|300113926|ref|YP_003760501.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
 gi|299539863|gb|ADJ28180.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
          Length = 355

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 90/322 (27%), Gaps = 71/322 (22%)

Query: 6   VLALVFFLV--------PCTASVAQKVRLVSWNIN---TLSEQEGVSLWKNSVKRT---- 50
           VLA  FF               +A  + + S+NI      + ++      ++   T    
Sbjct: 45  VLAAFFFFWDVQNIFEGITFTVLAAAILVQSYNIFPHTFFAAKQVRDTSADTPGNTISLL 104

Query: 51  -------TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
                    +       A+  DADIV + E        +V        +   + L N   
Sbjct: 105 IANVLMDNRNVQRFLAIAREADADIVLMLE-PDQWWEEQVRELEVKYAYTVKKPLDN--- 160

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
                     + +  K   V  +   LL           +         +G+ I +  +H
Sbjct: 161 -------RYGMLLYSKFELVAPEIKFLLKEGIPSIHTEVKLP-------SGQLIRMHCLH 206

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
            +     ++  + Y  +          L     + K S  P ++AGD N           
Sbjct: 207 PEPPSPTEADTSIYRDA---------ELLIVGKEVKNSTQPVIVAGDLNDVAWSYT---- 253

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANK--NLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
              T+    S +  P+      N+    +   + P+D+    ++     +          
Sbjct: 254 --TTLFQKTSGLLDPRIGRGMFNSYHAKHPLIRWPLDHLFHSEDFLLVRV---------- 301

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
                      SDH PI I   
Sbjct: 302 ----IRMPAFGSDHFPIYIKLS 319


>gi|161618597|ref|YP_001592484.1| hypothetical protein BCAN_A0638 [Brucella canis ATCC 23365]
 gi|161335408|gb|ABX61713.1| Hypothetical protein BCAN_A0638 [Brucella canis ATCC 23365]
          Length = 358

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 150 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 199

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 200 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 246 ----------FQQSEQIEALSVQFRGLSENAILSGDLNATPWSATTKRI-------AELA 288

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 289 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 339

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 340 HLPVLVEFS 348


>gi|261754614|ref|ZP_05998323.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 3 str. 686]
 gi|261744367|gb|EEY32293.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 3 str. 686]
          Length = 357

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 149 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 198

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 199 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 244

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 245 ----------FQQSEQIEALSVQFRGLSENAILSGDLNATPWSATTKRI-------AELA 287

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 288 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 338

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 339 HLPVLVEFS 347


>gi|162455047|ref|YP_001617414.1| hypothetical protein sce6765 [Sorangium cellulosum 'So ce 56']
 gi|161165629|emb|CAN96934.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 507

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 71/257 (27%), Gaps = 42/257 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +++ +VRL++ NI   +     S      KR            + +  DI  LQE     
Sbjct: 51  ALSTRVRLMAANI---TSGNNQSYDPGHGKR----------ILQGIKPDIALLQEFNYGG 97

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                          +T        R+S   I   I  R   V            +   +
Sbjct: 98  NTT----SEIRAFVDATFGAGFSYYRESGAQIPNGIVSRWPIV---------ASGEWDDT 144

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              NR      ++I G    V  I +               S +  + +AQ L  +I   
Sbjct: 145 SVSNRDFAWARIDIPG-PGHVFAISVHLLTS----------SAAARNTEAQHLVSFIEAN 193

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                  VI GDFN               +          +  ++  NA +        D
Sbjct: 194 VAQGDYLVIGGDFNTGSRTEACVSSLSDVVVTAGPYP-ADRNGNANTNAGRTKPY----D 248

Query: 259 YFVMDQNAYKFLIQESF 275
           + ++D +   +      
Sbjct: 249 WVLVDGDLEAYETPVVI 265


>gi|153823973|ref|ZP_01976640.1| exodeoxyribonuclease III [Vibrio cholerae B33]
 gi|126518510|gb|EAZ75733.1| exodeoxyribonuclease III [Vibrio cholerae B33]
          Length = 145

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 38/149 (25%), Gaps = 37/149 (24%)

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------------------NYLGNND 222
             Q  + L  ++ + + +    V+ GD N                        ++     
Sbjct: 3   KRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEER 62

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQE 273
           ++ +T+     +  F +      +       +           ID  +      +   + 
Sbjct: 63  EWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEA 122

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    D       + SDH PI   +
Sbjct: 123 GI-------DYELRAIDKPSDHAPIWTTF 144


>gi|39975905|ref|XP_369343.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
 gi|145011582|gb|EDJ96238.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
          Length = 1238

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 23/205 (11%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIVFLQEMGSYNA 79
           +K+R+ S+N+  L+E +           +   Y +L     + D  AD++ LQE+     
Sbjct: 268 KKLRVASYNV--LAEFDFPP--------SQERYPVLVNTILSQDALADVLILQEVTDDFL 317

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +  ++    +        +         H  I    + V    +             
Sbjct: 318 CYLLANEDVHASYRYVSHAPPNQDNIEPLPSHLNIVFLSRVVF-DWEWVQFPRDHKGSVV 376

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           A  R  +    +     + V  +HL               + S  + + + L   + Q  
Sbjct: 377 ARFRD-LGRWEDAQSVPLVVASVHLTHGLSD--------QAVSTRTAEVERLLSHLVQNY 427

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF 224
           +   P+++AGDFN   + L   +  
Sbjct: 428 Q-GHPWIVAGDFNTTTSPLTIKEAL 451


>gi|18407510|ref|NP_566121.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|4249410|gb|AAD13707.1| expressed protein [Arabidopsis thaliana]
 gi|21618284|gb|AAM67334.1| unknown [Arabidopsis thaliana]
 gi|109134181|gb|ABG25088.1| At2g48030 [Arabidopsis thaliana]
 gi|330255832|gb|AEC10926.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Arabidopsis thaliana]
          Length = 438

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/276 (10%), Positives = 67/276 (24%), Gaps = 77/276 (27%)

Query: 59  QYAKNLDADIVFLQ-----EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           +    LDAD++ LQ     E      ++ +         ++      +            
Sbjct: 159 EVLSELDADVLALQDVKADEADQMRPLSDLAAALGMNYVFAESWAPEY-----------G 207

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDS 172
            A+  K          +    D       R  ++  +E+ G  ++     HL        
Sbjct: 208 NAILSKWPIKSSNVLRIFDHTDF------RNVLKASIEVPGSGEVEFHCTHLDHL----- 256

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR-KINYLGNNDD-------- 223
                        +Q   +         + VP ++AG  N    +               
Sbjct: 257 -------DEKWRMKQVDAIIQ------STNVPHILAGALNSLDESDYSPERWTDIVKYYE 303

Query: 224 ----------FWKTIDPNDSLIRFPKEKD--------SRCNANKNLRNKIPIDYFVMDQN 265
                       + +   +         +           +     +    +DY +   +
Sbjct: 304 EMGKPIPKAQVMRFLKSKEYTDAKDFAGECESVVVVAKGQSVQGTCKYGTRVDYILASSD 363

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +    +  S+S +              SDH  + +D
Sbjct: 364 SPYRFVPGSYSVLSSKGT---------SDHHIVKVD 390


>gi|82541665|ref|XP_725057.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479921|gb|EAA16622.1| Arabidopsis thaliana At3g58560/F14P22_150-related [Plasmodium yoelii
            yoelii]
          Length = 1534

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 2/97 (2%)

Query: 19   SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            S   +  +++WNI        E  S     +   +   T + Q   N   DI+ LQE+ +
Sbjct: 1136 SSDNQFTVMTWNILAEIYGTSEAFSHCDPYMLSWSYRKTKIIQEILNYRPDIICLQEIQN 1195

Query: 77   YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
             + +    P  +   +    +        S +  H  
Sbjct: 1196 EHFLEFFKPCLSQYEYQGAYKQKTKEIFTSPSGKHKG 1232



 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 21/74 (28%), Gaps = 9/74 (12%)

Query: 240  EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS---------EILYNEDDIKSRGK 290
            +K      N        +DY   +      +   +           +I +          
Sbjct: 1458 DKFEPAFTNYTSNFIGCLDYIFYNDEDLNIISTVNIPNETQLIQESQIYHLSTSALPSPV 1517

Query: 291  RLSDHCPISIDYDF 304
            R SDH P+   ++F
Sbjct: 1518 RPSDHFPLVAKFEF 1531


>gi|297562470|ref|YP_003681444.1| endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296846918|gb|ADH68938.1| Endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 351

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 81/303 (26%), Gaps = 59/303 (19%)

Query: 7   LALVFFLVP------CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           LAL   +VP       T++    VR+++ N                     +D   +   
Sbjct: 97  LALAAVVVPRAVPFGVTSAGGPVVRIMTLNTLGGG----------------ADAARVVSL 140

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            ++ + D++ LQE+                       L+ H+   S+        V    
Sbjct: 141 VRDREVDVLTLQEVTPDLVRELSAAGLD--------DLLPHAVDRSDPRGVHGSTVHSAL 192

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                          +   A  R   +   +     + V  +H+          +     
Sbjct: 193 PLTDTGGGEAGHDTFAMPTAVVRLPEDGDGDGEDDVLEVTSVHVPPPLSPAYTASWRGE- 251

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                       + + +  +     V+AGDFN  +++    +        + +++    E
Sbjct: 252 -----------LEGLAEVGDPDTMRVLAGDFNATLDHAALREVLEAGYLSSAAVL---GE 297

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                         + ID+ ++                    D ++      +DH  + +
Sbjct: 298 GLEPTWPVGRAVPGLAIDHVLVHPRMG--------------VDGLEVVEVTGTDHRAVLV 343

Query: 301 DYD 303
           +  
Sbjct: 344 EVS 346


>gi|189241858|ref|XP_971116.2| PREDICTED: similar to skeletal muscle/kidney enriched inositol
           5-phosphatase [Tribolium castaneum]
          Length = 455

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 86/322 (26%), Gaps = 57/322 (17%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GS 76
           + +R  + ++N+ T +    ++          +D   L          I+  QE+     
Sbjct: 2   ENLRLYVGTYNVGTSTPDIKLNSLLGLPDDHKTDKLQLPDIY------ILSFQEVKAQPQ 55

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLLGAK 134
              +  +F               N+ K  S         +   +K++  +++        
Sbjct: 56  NMLLDALFDDPWTYACKELLDTFNYVKIKSVRLQGLLLNVYCLRKHLLNIREIESDYTRT 115

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHL-KSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 GN+ AV + + I G  +  ++ HL      L      Y+          +   +
Sbjct: 116 GLSGMWGNKGAVSVRLSIYGCSLCFVNSHLSAHDNQLKDRVEDYNNIIKDQEFHVEETTE 175

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDD-----------------------------F 224
                          GD N ++    +                                 
Sbjct: 176 IFFH-----DYVFWMGDLNFRLLEEYDQTPEEIERDIVKNELKKLFTFDQLRYVMRKGEA 230

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED- 283
           +  ++  D       + +   N     R     D  +        +   ++  +    D 
Sbjct: 231 FSELEEKDPEFPPTFKFEVGTNRYDFKRRPAWCDRILY------RVNPHNYENVTLKVDQ 284

Query: 284 --DIKSRGKRLSDHCPISIDYD 303
                    +LSDH P++ +++
Sbjct: 285 LSYKHHPSYQLSDHKPVTAEFN 306


>gi|157823485|ref|NP_001102187.1| protein angel homolog 1 [Rattus norvegicus]
 gi|218563497|sp|B2RYM0|ANGE1_RAT RecName: Full=Protein angel homolog 1
 gi|149025240|gb|EDL81607.1| angel homolog 1 (Drosophila) (predicted) [Rattus norvegicus]
          Length = 667

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 241 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDH 300

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 301 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 360

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 361 VGLVLLLQPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSD- 419

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 420 -----GSHCPIILCGDLNSVPDSPLYN 441


>gi|328354254|emb|CCA40651.1| endonuclease III [Pichia pastoris CBS 7435]
          Length = 731

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 83/305 (27%), Gaps = 53/305 (17%)

Query: 19  SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG- 75
           S      + ++NI        +       +         LL +  ++L+ DI+  QEM  
Sbjct: 37  SYGDTFSVSTYNILNQHYIWPQVFKYVPENDIDWNYRQQLLDKNFRDLNTDIMCFQEMEY 96

Query: 76  -----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
                 +    +  P   +   +  ++  ++  +   N    +I  +     V+      
Sbjct: 97  DIYDTHWKNSGESSPLKDYRSIFVRKKPPHYWTKSERNLDGVSIFYKDSVFEVIDHVDFD 156

Query: 131 L-------------GAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHLKSFCFL---DS 172
           L               +D   R   R   A+   +        V+      +      D 
Sbjct: 157 LADLVREHDFPSFEHTEDFKERVLPRNTVALVAALRHKHSGEIVMVSTTHLYWSPKFQDV 216

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------------L 218
                   C+++ Q  + L+       +  +P +I GD N +I+                
Sbjct: 217 KLIQMLIICNVIRQFQKKLEKKGLLSPKDPIPLIICGDLNSQIDSFVYQFLKTGDIDLHR 276

Query: 219 GNNDDF--------WKTIDPNDSLIR---FPKEKDSRCNANKNL--RNKIPIDYFVMDQN 265
                F           +  +D L     +     +          +    IDY   ++ 
Sbjct: 277 DYEKWFTKYDYGSTLDLLKSSDPLKLKSSYNGLFQAGNFPFTTFTEKYTNIIDYVWYNKE 336

Query: 266 AYKFL 270
            +  +
Sbjct: 337 KFDLI 341


>gi|227496956|ref|ZP_03927208.1| endonuclease/exonuclease/phosphatase [Actinomyces urogenitalis DSM
           15434]
 gi|226833564|gb|EEH65947.1| endonuclease/exonuclease/phosphatase [Actinomyces urogenitalis DSM
           15434]
          Length = 321

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/316 (10%), Positives = 74/316 (23%), Gaps = 38/316 (12%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT----------LLRQYAKNLDADIVFLQE 73
           +R+++ N+       G      +     +D T           L    + +  D++ LQE
Sbjct: 2   IRVLTLNLQHALPGPGALSDPATAPLARADITDPAAARQVLGALALQLREISPDVIALQE 61

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +    A +    +       S     ++    +       +  R +   +   +  +LG 
Sbjct: 62  VDLGQARSGRLNQA--AELASALGWDSYRFAATYAGAVVGLRRRPRRSALDSPADDVLGP 119

Query: 134 KDSFSRAGNRR---AVELLVEINGKKIWVLD---IHLKSFCFLDSLENTYSPSCSLLSQQ 187
             + +         A+   + +    +  L      + S         +Y    +    Q
Sbjct: 120 LRAAAGLPMAGFGNALLTRLPVESWAVQRLGRGPALVTSRAGRGWDPRSYRLHTATARCQ 179

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-- 245
                          V        +                 P   L+            
Sbjct: 180 LAATLAVPGWHAPLTVSTTHLATRSDVAARQLAAAWAALAARPGAHLLAGDLNMRGDRLR 239

Query: 246 -----------NANKNLRNKIPIDYFVMDQ-------NAYKFLIQESFSEILYNEDDIKS 287
                          +      IDYF+ D        +        +    +        
Sbjct: 240 EVGLARQVGEGETFPSGAPSHRIDYFLTDPWPAGPDGSPLGLADLAASQVPVLRARAWGV 299

Query: 288 RGKRLSDHCPISIDYD 303
           R   +SDH    +D +
Sbjct: 300 RELVVSDHAATWVDLE 315


>gi|125574717|gb|EAZ16001.1| hypothetical protein OsJ_31445 [Oryza sativa Japonica Group]
          Length = 293

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/245 (11%), Positives = 64/245 (26%), Gaps = 35/245 (14%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +  +++++N+           W             L    +  + D +  Q +       
Sbjct: 21  KTFKIMTYNV-----------WIREDIELHRRLGALGDLIQLHNPDFICFQ-VPGNKENE 68

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K+ P     +             ++            K         P   +        
Sbjct: 69  KIEPLPV--VVLHPPARGLPPNLEAKLAGR-----MSKLPVSESNPIPFSKS------IM 115

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R     +V+     + V   HL+S C L  L             QA+   + + Q + +
Sbjct: 116 KRELCVAVVKTGEIHLAVGTSHLESPCPLPPLW--DLKYSEKRVAQAKQSLEILGQLRNA 173

Query: 202 LVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
               +  GD N        +   +      ++       +  +  +    + N + +   
Sbjct: 174 ----IFCGDMNWEDKVDGPFPLPDGWIDAWVELKPGDNGWTYDTKANAMLSANFKQQKRP 229

Query: 258 DYFVM 262
           D FV 
Sbjct: 230 DQFVC 234


>gi|123223478|emb|CAM21420.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 264

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 67/271 (24%), Gaps = 54/271 (19%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---MGSYNAVA 81
           R+VSWNIN +         +          T LR+    LDADIV LQE      ++ + 
Sbjct: 1   RVVSWNINGIRSPLQGLACQEPSSC----PTALRRVLDELDADIVCLQETKVTSEHSRIQ 56

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--------------RKKNVRVLQQS 127
            ++           E   ++     +   ++ +A                      L   
Sbjct: 57  DLYGDVLTEPLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGD 116

Query: 128 YPLLGAKDSFSRAGNRRA-----------VELLVEINGKKIWVLDIHLKS-FCFLDSLEN 175
               G  D F++   R                 +E   K + +++++             
Sbjct: 117 IGCYGNMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLT 176

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------------NYLGNN 221
                  LL  +A+ L         +    +I GD N                       
Sbjct: 177 FKMRFYRLLQMRAEALLA-------AGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGR 229

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                 +                     + +
Sbjct: 230 KWMDGLLSNPGDEAGPHIGLFMDSYRYLHPK 260


>gi|56460778|ref|YP_156059.1| hypothetical protein IL1677 [Idiomarina loihiensis L2TR]
 gi|56179788|gb|AAV82510.1| Uncharacterized conserved membrane protein [Idiomarina loihiensis
           L2TR]
          Length = 351

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/283 (9%), Positives = 63/283 (22%), Gaps = 61/283 (21%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              ++R+++ N+ T +                     L +   +   D++   E   +  
Sbjct: 98  ANGRLRIMTANVLTPNHNSDG----------------LLKLVHDFTPDVLVTLESDDW-- 139

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    W                   D    + V  +          L+        
Sbjct: 140 ---------WQEKLDAIESDYPHTVKVPLDNLYGMHVYSRYALSDVSVEYLVEDDKPSVH 190

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                         G+K+    +H       ++ E+    +          L     + +
Sbjct: 191 CFIELP-------CGQKVKAHFVHPAPPSPSENEESAERDA---------ELVLVARRVE 234

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P ++ GD N            ++ +     L              +    + P+D+
Sbjct: 235 PEKYPTIVTGDLNDVAWSRTT--LLFRKLS--GLLDPRIGRGMFNTFHAEYWFARWPLDH 290

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                               +    +       SDH P+  + 
Sbjct: 291 IFHS--------------HHFALVSMTRLPGFGSDHFPLLTEL 319


>gi|150865111|ref|XP_001384196.2| Inositol-1,4,5-triphosphate 5-phosphatase [Scheffersomyces stipitis
           CBS 6054]
 gi|149386367|gb|ABN66167.2| Inositol-1,4,5-triphosphate 5-phosphatase [Scheffersomyces stipitis
           CBS 6054]
          Length = 1025

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 75/308 (24%), Gaps = 51/308 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--------SYNA 79
           ++N+N       ++ W                  K  D   + +QE+         + N 
Sbjct: 619 TFNVNGTFNDGDINKWLFPSD---------ADVDKAYDLVFIGMQEIVELNASQMVNINV 669

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKD 135
             K   +        T            +     IA    +R+  ++ +           
Sbjct: 670 GNKFMWERKIKQVLDTSNAKGLKYVSLWSGQIGGIALFLFIREDEIKSISNVEGSFKKTG 729

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 N+  V +    +   +  +  H  +        +    +        + +    
Sbjct: 730 LGGMTANKGGVAVSFNYSNTDLCFVCSHFAAGMSNIEERHHNYKTL------IKGMLFSK 783

Query: 196 TQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPK 239
            +K  +    +  GDFN +I                      D   + +   +S   F +
Sbjct: 784 NRKIRNHDGVIWLGDFNFRIGLPNDQVKPLIEQRQFTKLFEYDQLNRQMANGESFPFFDE 843

Query: 240 EKDSRCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
            +       K        D                ++  S  +I+             SD
Sbjct: 844 MEIKFAPTYKFDNGTTTYDTSEKQRI---PAWTDRILNMSREKIIKQLYYNSCEDVIFSD 900

Query: 295 HCPISIDY 302
           H P+S  +
Sbjct: 901 HRPVSAVF 908


>gi|74008029|ref|XP_851237.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 68/292 (23%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIVTLNVNGLNDP--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y        +              +            L G           
Sbjct: 54  LKIKGWRTIYHLNGPQKKAGVAILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +L+I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLTILNIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLI---RFPKEKDSRCNANKNL 251
             +I GDFN          K N          T+D  D                  +   
Sbjct: 141 --LILGDFNLALSILDRSSKHNISKKTRALNDTLDQMDFTDIERTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+    ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHIFGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|50548277|ref|XP_501608.1| YALI0C08657p [Yarrowia lipolytica]
 gi|49647475|emb|CAG81911.1| YALI0C08657p [Yarrowia lipolytica]
          Length = 455

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 67/230 (29%), Gaps = 17/230 (7%)

Query: 24  VRLVSWNINTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
             ++++N    +  +  +        +     T+L++   + +  I+  QE+ +   N  
Sbjct: 76  FTIMTYNTLGQTLIRRKLFPENGDALKWKWRSTILQKEVTHYNPTIMVCQEVDAEKYNWW 135

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVRVLQQSYPLLGAKDS 136
            +   K+ +   +ST    NH    +            A+   +V +             
Sbjct: 136 NEFLSKHGYDSVFSTYEGKNHGLMCAWKKDMFEFENKQAIEYDHVIMENLPVQF------ 189

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                    + + ++       ++      F            +  LL    ++++D + 
Sbjct: 190 ---KTRNTGLIVQLKHAVTAKTIIVATTHLFWHPMGSFERTKQTAMLLRASQKYVED-LD 245

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
            +K +    V+AGDFN                D     I     +     
Sbjct: 246 AEKGTKSILVVAGDFNSTPWDGPYVGATMHKFDEITRPILSASLQYKFTR 295



 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 6/71 (8%)

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------GKRL 292
           K K     +N     +  +DY  +  N    +  +S  ++   ED               
Sbjct: 383 KHKKEPRFSNWAHAWRGLLDYIFVSSNNSDEVQVKSLLKMPLEEDMGPEPSGQPRIDMYP 442

Query: 293 SDHCPISIDYD 303
           SDH  I  + +
Sbjct: 443 SDHLAIMAEVE 453


>gi|218510524|ref|ZP_03508402.1| putative endonuclease/exonuclease/phosphatase protein [Rhizobium
           etli Brasil 5]
          Length = 232

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 56/190 (29%), Gaps = 34/190 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + S+N++     +              D     +    + AD++ LQE  +         
Sbjct: 39  IASYNVHKCVGTDRRF-----------DPERTSRVIHEIGADVIALQEADTRFGERTGIL 87

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   +    +  +     +  H  + + KK +        L G          R A
Sbjct: 88  DLGRLERETGLIPVPVAGMTKAHGWHGNVVLFKKGLVHDVHQIRLPGL-------EPRGA 140

Query: 146 VELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           +   +E+  G  + ++  H                     +QQA+ L + I       +P
Sbjct: 141 LVAEIELEEGGVLRIIAAHFGLLRHN-------------RAQQARTLVELIKD--RHEMP 185

Query: 205 FVIAGDFNRK 214
            ++ GD N  
Sbjct: 186 TILLGDLNEW 195


>gi|116793209|gb|ABK26655.1| unknown [Picea sitchensis]
          Length = 322

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 71/288 (24%), Gaps = 54/288 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +  +++N+    E               +    L    +      +  QE+        
Sbjct: 78  TLVFLTYNV-WFRED----------LEVHARMKALGDLIEQHQPHFICFQEVT------- 119

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNN---DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
               N + IF  +     +    S               +      +  P   +      
Sbjct: 120 ---PNIYEIFRHSSWWAKYKCSVSPEHAMRRAYFCMQLSRLPVEDFRRKPYANS------ 170

Query: 140 AGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              R      V+   GK++ V   HL+S C             +    QA+   + +   
Sbjct: 171 IMGRELCIAEVDAGMGKQLVVATTHLESPCPAPPKW--DQMYSAERVFQAKESLNLLKNL 228

Query: 199 KESLVPFVIAGDFNRK------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                  +  GD N                D W  + P      F   +          R
Sbjct: 229 PN----VIFGGDMNWDDKLDGAPPLPDGWSDVWVKLRPGQLSSLF-WLRVQGTKTGTTRR 283

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 +     N   F  ++ + +   +   ++   + LS   P+ +
Sbjct: 284 KA----HI----NYMAFSTRKVYHKSFVHFWGLEPPARDLS--LPVLV 321


>gi|87303227|ref|ZP_01086020.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701]
 gi|87282122|gb|EAQ74083.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701]
          Length = 117

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/101 (7%), Positives = 24/101 (23%), Gaps = 18/101 (17%)

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMD 263
                    D     +  ++      +  +           +           ID+  + 
Sbjct: 5   STTPSDPERDALR--LALDERQADVFRLFEPDSGHWSWWDYRSGAWDRDSGWRIDHIYLS 62

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +   +        + +   D       + SDH P+ +   +
Sbjct: 63  EELQERATGCRIQKAVRGND-------KPSDHAPVVVQLQW 96


>gi|213401177|ref|XP_002171361.1| synaptojanin-2 [Schizosaccharomyces japonicus yFS275]
 gi|211999408|gb|EEB05068.1| synaptojanin-2 [Schizosaccharomyces japonicus yFS275]
          Length = 1048

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 86/302 (28%), Gaps = 42/302 (13%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLDADIVFLQEMGSYNAVAKVF 84
           + S+N+N  +    +  W        +D  ++  Q    L       Q++ S +   +V 
Sbjct: 562 VGSYNLNGCTATSKLEPWLFPNNEPMADIYVIGFQEIVELTP-----QQVISADPAKRVE 616

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLLGAKDSFSRA 140
            +        +            +      A+    ++K++  ++     +        +
Sbjct: 617 WEKCVQDVLDSHAEEGEKYVLVRSGQLVGTALLFFAKEKHLNSIRNLEGTVKKTGLGGVS 676

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+ AV +  + +   I  +  HL +        N    + S        L+    +   
Sbjct: 677 GNKGAVAIRFDFDDTAICFVTSHLAAGYTNYDERNHDYHTISHG------LRFKRGRSIF 730

Query: 201 SLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDSR 244
           +    +  GDFN +I+                     D     +        F ++  + 
Sbjct: 731 NHDYVLWFGDFNYRISLTYEEVVQCIQQGKLEYLFDSDQLNTQMLMGAVFPFFSEQTITF 790

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR----GKRLSDHCPISI 300
               K        D       + K  +      IL+  + I           SDH PI  
Sbjct: 791 PPTYKFDIQSDTYD------TSDKHRVPAWTDRILFRGEVIPETYGCCPLYASDHRPIYG 844

Query: 301 DY 302
            +
Sbjct: 845 TF 846


>gi|49471670|gb|AAT66130.1| membrane nuclease A-like protein [Mycoplasma arthritidis]
          Length = 270

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 75/273 (27%), Gaps = 34/273 (12%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-----RDSNNDIHTA 113
              K LD D++ L E+   +A+  +           +   I+  K            H  
Sbjct: 1   AVIKKLDYDLIGLTEVLDSSAIQSIVDHLNSIHGTKSYEYISSQKLKGKQASPGQAEHVG 60

Query: 114 IAVRKKNVRVLQ--------QSYPLLGAKDSFSRAGNRRAVELLVEINGK----KIWVLD 161
           I  +   ++ L                     +    R       E   +    K+  + 
Sbjct: 61  IIYKNDKLKPLPFVNNTIGYSYTSSFSHHPLTNAEYVRPPFGAQFEWKTRLKKDKLTFVF 120

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLG 219
            H  S    +  +  +         +AQ L + +   +          AGD N K+N   
Sbjct: 121 DHFDSPGAKNGEQTIHGMGAQE-YVEAQQLPNVLLTFETMSQSKNIFFAGDTNIKVNKES 179

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------FLI 271
                +  ++            +S   ++   +   P D      N           + +
Sbjct: 180 I---AFSNLNNYTKA-FDDNLSNSTSLSDTPNQYSQPYDKIFYKTNLLLNQAFIYDLWNV 235

Query: 272 QESFSEILYNEDDIKSRGK--RLSDHCPISIDY 302
           +       Y      +  +  ++SDH PI +D 
Sbjct: 236 KNDSQVNSYLSILKSAYLEPKKISDHAPIGVDI 268


>gi|326332555|ref|ZP_08198824.1| endonuclease/exonuclease/phosphatase family protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325949647|gb|EGD41718.1| endonuclease/exonuclease/phosphatase family protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 271

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 70/291 (24%), Gaps = 63/291 (21%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-----------------------AKV 83
                + Y  L  +     AD+V LQE+     +                        ++
Sbjct: 7   NAWGGARYDDLAAWLPTAGADVVCLQEVTRTAGLSGWTSFADGERSLPQRANLHGDVRRL 66

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-----------YPLLG 132
            P     +                +     +    +      +                 
Sbjct: 67  LPSYEGPVSSPAMPARLTDDAGRRHRQDFGLGTYVRRAAARHRHGGARSCTAGFVDHDEW 126

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                  +G R AV ++    G+++ VL +H          +           +QA+ L 
Sbjct: 127 TNHRPLPSGPR-AVRVVDRAGGRQVCVLQLH-------GLRDPAGKGDTPARREQAERLA 178

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
            ++   +      V+AGD N   +        +  +              +    +  L+
Sbjct: 179 AFVEATRAPGDLVVVAGDLNLLPDS-----ATFDVLRRIGLQDLV---GTADTRTSSYLK 230

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 Y ++            F      E         +SDH  + +D  
Sbjct: 231 PVRHASYLLVSDPEAV----AGFRVRTEPE---------VSDHRILELDLT 268


>gi|262197611|ref|YP_003268820.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
 gi|262080958|gb|ACY16927.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
          Length = 277

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/302 (10%), Positives = 78/302 (25%), Gaps = 50/302 (16%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA------------- 66
              ++ + + N   L+     +  + ++    +++ LLR                     
Sbjct: 4   SPAQLTITTHN---LAMGRLSTEPRRALAAWAAEHRLLRPLLACWPPLAERYAAHPWLGA 60

Query: 67  -DIVFLQEMGSYNAVAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
            DI+ LQE+            + + +  +   R       D+         +  +     
Sbjct: 61  SDILGLQEVCLGQPAQLDALADIFRVRGHEPARHSAPESPDAAPPCRKGQLLLSRFAIAA 120

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
               PL     +      R A+    E+ G +     +       L + +       +  
Sbjct: 121 SGVLPLPRVGAA------RVAIWCDFEVPGLRGARGALLRIYDTHLSNRDGRDLLPLAGR 174

Query: 185 SQQAQWLKDWITQKKE--SLVPFVIAGDFN--RKINYLGNNDDFWKTIDPNDSLIRFPKE 240
             Q   +       ++     P V+ GD N      +    +     +  +         
Sbjct: 175 RAQIDVILAHAAALEDAHPGAPCVLLGDLNTLSCPLWPPAREPALDALGEHGFRSAIAGF 234

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           + +     +       +D+          L       I          G+  SDH P+  
Sbjct: 235 RATALIPYQ-------LDWIFYRH-----LALAEARVI----------GRVHSDHLPVCA 272

Query: 301 DY 302
            +
Sbjct: 273 RF 274


>gi|86146869|ref|ZP_01065188.1| hypothetical protein MED222_20944 [Vibrio sp. MED222]
 gi|85835321|gb|EAQ53460.1| hypothetical protein MED222_20944 [Vibrio sp. MED222]
          Length = 280

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 82/283 (28%), Gaps = 64/283 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + +  WNI           +K +     S+   L        +D+V LQE      +
Sbjct: 58  SDGLDITVWNI-----------YKQNRNNWQSELNQLSA-----GSDLVLLQEASMTEGL 101

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        S +            +    +     ++ +   +Y      +     
Sbjct: 102 R--------QWVTSGQWGSTRVNAFEAFEQSAGVLNLATHLPIEACAY----THEEPWLQ 149

Query: 141 GNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             + A+    +  NG+++ V++IH  +F F                 Q + L D + + +
Sbjct: 150 LPKSALWSRYLLSNGEELAVINIHAVNFTFGTEDYEA----------QLKSLTDNLQKYR 199

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P + AGDFN        ++  +  +      +   +      +        + +D+
Sbjct: 200 G---PVIFAGDFNSW------SEARFAVLKDALEQVGLTEVAFEP-DNRTQFMTGLVLDH 249

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                  D  K+     SDH P+ + +
Sbjct: 250 VFYRG---------------LEVDKAKAPITDASDHNPMRVTF 277


>gi|326664783|ref|XP_003197885.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1148

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 76/293 (25%), Gaps = 75/293 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + + N+                 R+      +  + K L +D+  LQE         +
Sbjct: 12  LTISTINVR--------------SVRSPIRAQSVLSFLKLLKSDVFLLQEC-------AL 50

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +             SN + +  +A+   N  +L +   ++            
Sbjct: 51  PFISNYRKWEDVWTPGPSLWSGSNQNKNDGVAILINNPNILVKGTTVVRDGR-------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A  + +   G+   VL+I+             Y             L + +        
Sbjct: 103 -AFLVTLTFLGRDFNVLNIYGH-----TDKNERY------------ELLEDLQPHMLGKP 144

Query: 204 PFVIAGDFNRKINYLGNNDDFWKT-------------IDPNDSLIRFPKEKDSRCNANKN 250
           P V+AGDFN  +         +K                  D   +    ++     + +
Sbjct: 145 PLVVAGDFNCILTQKDRKKADFKLDKTSTLLNHLVKDFKLVDCFRQVHPREEGFTWFSSD 204

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +   IDY                    +   D        SDH  +S    
Sbjct: 205 STSASRIDYIFTRD---------------FPPVDATLTPTFFSDHTILSCTLS 242


>gi|23501509|ref|NP_697636.1| AP endonuclease domain-containing protein [Brucella suis 1330]
 gi|254703962|ref|ZP_05165790.1| AP endonuclease domain-containing protein [Brucella suis bv. 3 str.
           686]
 gi|260566790|ref|ZP_05837260.1| endonuclease/exonuclease/phosphatase family protein [Brucella suis
           bv. 4 str. 40]
 gi|23347417|gb|AAN29551.1| AP endonuclease family 1 domain protein [Brucella suis 1330]
 gi|260156308|gb|EEW91388.1| endonuclease/exonuclease/phosphatase family protein [Brucella suis
           bv. 4 str. 40]
          Length = 322

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 114 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 163

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 164 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 209

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N                   +  
Sbjct: 210 ----------FQQSEQIEALSVQFRGLSENAILSGDLNATPWSATTKRI-------AELA 252

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 253 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 303

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 304 HLPVLVEFS 312


>gi|325109513|ref|YP_004270581.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
 gi|324969781|gb|ADY60559.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
          Length = 409

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/379 (7%), Positives = 76/379 (20%), Gaps = 93/379 (24%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           F  +         +R  ++N++   +  G            +   ++ +  + +  D++ 
Sbjct: 31  FRALAANPPTKDLIRFATYNVSMYRQGPGQLAQDLQGGNDDAAC-MVAEIIQRVRPDVLL 89

Query: 71  LQEMGSYNAVAKV---------FPKNTWCIFYSTERLINH-------------------- 101
           L E      +              +N                                  
Sbjct: 90  LNEFDYEADLKAAQRFCNEYLQVGQNQHPPILYPYLYAAPVNTGVPSGVDLNNDSRTDGP 149

Query: 102 --SKRDSNNDIHTAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRAV--- 146
             +           + +  +              L +  P                    
Sbjct: 150 EDAYGFGRYPGQYGMLLLSQYPIQSEYVRTFQKFLWKDMPQSALPPDVKGKPYYAPETLD 209

Query: 147 ----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----- 191
                     ++ V +  + I VL  H     +    +     +   +   + ++     
Sbjct: 210 IVRLSSKSHWDVPVVVGNRIIHVLAAHPTPPIYDGPEKRNARRNHDEIRFWSDYVFPGRN 269

Query: 192 -----KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------------- 231
                 +       +   FVI GD+N   +         K +  +               
Sbjct: 270 GYIYDDNTKRGGLTAGTHFVILGDYNADPSDGDTYAGAIKQLLAHPLVNAEIVPESDGGV 329

Query: 232 ---DSLIRFPKEKDSR----CNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNE 282
                L    ++             +        +DY +                     
Sbjct: 330 QSSRDLPGVNRDHRGPSAQDTANFSDGNGPGNLRVDYVLPSATL----EASRAGVFWPAT 385

Query: 283 DDIKSRGKRLSDHCPISID 301
               +     SDH  + +D
Sbjct: 386 GRDGATLVDASDHRLVWLD 404


>gi|308803490|ref|XP_003079058.1| APEX nuclease (ISS) [Ostreococcus tauri]
 gi|116057512|emb|CAL51939.1| APEX nuclease (ISS) [Ostreococcus tauri]
          Length = 524

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 87/291 (29%), Gaps = 43/291 (14%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-----AKNLDADI--VFLQEMG-SY 77
           + SWN+  L     ++    S  R    +   R        + L AD+    +QE   S 
Sbjct: 44  IASWNV-GLRGWRAMTDASRSRARAVDAHGQTRSVPRRGTLRALGADVRVACVQETKMSR 102

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA------IAVRKKNVRVLQQSYPLL 131
               +   +  W   +S     +     S   I+        +A+ +       ++   +
Sbjct: 103 LDFERRGREADWDCAHSACDARDKRSGYSGVAIYWRSRETCPVAIEEGVCGTRTKAESAI 162

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIW-----VLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
              +         A    ++  G+ IW      +  +L +     +++   +        
Sbjct: 163 WPNERPPLVDEDYARAKALDDEGRAIWADFGEFVLCNLYAPTTYGAVDEKVAERIDFKRD 222

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPN 231
             + L++ +T  +      ++ GD+N   N+                 + +   + +  +
Sbjct: 223 FLRALEERLTSLRSRGRRVIMCGDWNIAPNWKLDRAHDDPRAVEPKNESREWLTRVLGQD 282

Query: 232 DSLIRFPKEKDS----RCN----ANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                F +   +     C       +       IDYF+ D++    +    
Sbjct: 283 GMCDVFREVHPNVKAFTCWNVASGAQINDYGSRIDYFLCDRDTLGHVQGVG 333


>gi|256395680|ref|YP_003117244.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256361906|gb|ACU75403.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 242

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 77/283 (27%), Gaps = 55/283 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL---DADIVFLQEM--GSYN 78
           + + +WNI  L      +  ++S +    +   +      L      ++ LQE+     N
Sbjct: 2   ISVATWNI--LHRVHAENWGEDSPRHWPDEADRIAAITARLMKRTEQVIALQEVSGDQLN 59

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +    P +         R+       S+           +++ ++        A ++F 
Sbjct: 60  GLIHALPADRVAHALRYPRVPRPRHGTSSLQDP------SEHLVLVVNGPAHQVAAEAFD 113

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               +  + +          V+  H+ S                  + Q   L +     
Sbjct: 114 DDPGKGLLAVQ----TGDTLVVATHVSSGP--------------RRAGQLARLAEL---T 152

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             S  P V+ GDFN               + P  +L   P +       +        ID
Sbjct: 153 TASTHPVVLLGDFNCDSAT------VSAALGPGYTLAVLPPDA-PPTRPSGAGIAAQTID 205

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           + ++          E                  LSDH  +  D
Sbjct: 206 HIIVRGGGTSGAQTEDVGS--------------LSDHNLLRAD 234


>gi|238762655|ref|ZP_04623624.1| hypothetical protein ykris0001_8290 [Yersinia kristensenii ATCC
           33638]
 gi|238698960|gb|EEP91708.1| hypothetical protein ykris0001_8290 [Yersinia kristensenii ATCC
           33638]
          Length = 253

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 97/295 (32%), Gaps = 73/295 (24%)

Query: 14  VPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +P  A +     +R++ WNI                ++     ++L+++    DA ++ L
Sbjct: 24  LPPGAPLPTTEFLRVMVWNIF--------------KQQRAEWLSVLKEF--GRDAQLMLL 67

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE  +   + +                     + ++     A+      V  L  ++P+ 
Sbjct: 68  QEAQTTPELVR---------------YATSHYQAADQVPAFALPQHPSGVMTLAATHPVY 112

Query: 132 GAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                      R +   LV +    +G+ + V++IH  +F     + +           Q
Sbjct: 113 CCPLREREPLLRLSKSALVTVYPIHDGRLLMVVNIHAVNFSLGVDVYSK----------Q 162

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + + + I   +    P ++AGDFN       N    +      + +             
Sbjct: 163 LEPIGEQIAMHRG---PVILAGDFNAWSRQRVNALQRFAQGSGLEEVEFTTD-------- 211

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           N++     P+D+          L   + S ++           R SDH P+ +++
Sbjct: 212 NRSRAFGKPLDFVFYRG-----LTLANASVLVT----------RASDHNPLLVEF 251


>gi|237733070|ref|ZP_04563551.1| predicted protein [Mollicutes bacterium D7]
 gi|229383872|gb|EEO33963.1| predicted protein [Coprobacillus sp. D7]
          Length = 222

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 62/219 (28%), Gaps = 33/219 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + ++NI +L+                +D     +   +L  DI+ LQE+   +  +  F 
Sbjct: 3   IGTYNIKSLNY-------------GKNDLKSFNKDIIDLKLDIICLQEVDKNSLRSGNFD 49

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   S                +  + +  K   +   +  L  +         R  
Sbjct: 50  MLKIMANSSGYCYYYFYPTMWILSGYYGLGILSKYSIIEVMAQRLPNSII----REPRIL 105

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               +  N + I + + HL                     +Q     D++ +  +     
Sbjct: 106 TRTKLYFNEQIINIYNTHLTY------------ADNQYRIKQM----DYVKKHVDFNSYS 149

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
           ++AGDFN          +  K I+ N     F +     
Sbjct: 150 ILAGDFNSFKMNNKFKMEGVKCINENKKYKTFCEFAAPD 188


>gi|89054269|ref|YP_509720.1| endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1]
 gi|88863818|gb|ABD54695.1| Endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1]
          Length = 299

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 60/247 (24%), Gaps = 59/247 (23%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           D T +      +  D + LQE+ + N    +     +           +++         
Sbjct: 102 DATAILDDIAEVSPDHMTLQEVNASNRAQVLAALPNF-----------YARHFCPFASVG 150

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +AV  +   V    + +            R      V      +WV+ +HL        
Sbjct: 151 GVAVLSRYEVVEGSEFCI----------EGRGMAGFQVLSPQGPLWVVSVHLHWPYPYSQ 200

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                         Q + L   +   +    P +I GDFN             +  +   
Sbjct: 201 ------------RAQVEELTPIVAALEG---PVLIGGDFNMVPWS-----WVMREFERAS 240

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                     +    +        ID+ ++        +                  +  
Sbjct: 241 GSRVPHPLSGTIQLFDGWFAPP--IDHVILPGRGGIQSV----------------HPRLG 282

Query: 293 SDHCPIS 299
           SDH  I 
Sbjct: 283 SDHRAIV 289


>gi|74007557|ref|XP_538066.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 69/292 (23%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + + N+N L++                    +  + K  D  I  LQE          
Sbjct: 8   LSIATLNVNGLNDT--------------IKRRRVSDWIKKQDPSICCLQETHFRQKDTYS 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   Y +      +              +            L G           
Sbjct: 54  LKIKGWRTIYHSNGPQKKAGVTILISDKLKFTPKTVVRDEEGHYIILKG----------- 102

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                   I  + + +++I+  +                  ++    L   + +  ++  
Sbjct: 103 -------SIQQEDLRIINIYAPNVGA---------------AKYINQLLTKVKKYLDNNT 140

Query: 204 PFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---L 251
             +I GDF           K N          T+D  D    +     +           
Sbjct: 141 --LILGDFKLALSILDRSSKHNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAH 198

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  ++      +      ++            SDH  + ++ +
Sbjct: 199 GTFSRIDHILGHKSGLNRYQKIGIVPCIF------------SDHNALKLELN 238


>gi|116198421|ref|XP_001225022.1| hypothetical protein CHGG_07366 [Chaetomium globosum CBS 148.51]
 gi|88178645|gb|EAQ86113.1| hypothetical protein CHGG_07366 [Chaetomium globosum CBS 148.51]
          Length = 346

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 68/302 (22%), Gaps = 34/302 (11%)

Query: 34  LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY 93
            +                     + Q     DADI+ LQE+ +        P+     + 
Sbjct: 21  FATSTLYGYTPPPALHWVYRSERILQELHERDADILCLQEIATDVFRDFFSPELAQDGYK 80

Query: 94  STERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLL-------GAKDSFSRAGN 142
                   +K  +  D       A+  +     +L +                +     N
Sbjct: 81  GVHWPRPKAKTMAEKDAQAVDGCAVFYKSSKWILLDKQLLDYANIAINRPDMKNQHDIFN 140

Query: 143 RRAVELL-------------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           R A+ +                 + K I +      S          +  + +  +    
Sbjct: 141 RTAIMMENITRLAEKYSRWPALKDKKMIQLPLERRGSSAPTCPNPGRHKNTATTPTFHWS 200

Query: 190 WLKDWITQKKESLVPFVIAG-------DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
              D+ +    S+   +  G       DF          D          + +      +
Sbjct: 201 SAGDYNSTYDSSVYELLSMGRVAPNHSDFGDHQYGSFTRDGIEHPFSMRSAYVHLKGTPE 260

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                N        IDY     N      L+     + L       +      DH  I  
Sbjct: 261 DLPFTNYVPGFAEVIDYIWYSTNTLEVVSLLGPPDRDHLKRVPGFPNYHFPA-DHIQIMA 319

Query: 301 DY 302
           + 
Sbjct: 320 EL 321


>gi|114570418|ref|YP_757098.1| endonuclease/exonuclease/phosphatase [Maricaulis maris MCS10]
 gi|114340880|gb|ABI66160.1| Endonuclease/exonuclease/phosphatase [Maricaulis maris MCS10]
          Length = 335

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/289 (11%), Positives = 67/289 (23%), Gaps = 67/289 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A ++ +V+ N+  LS     +                      L  DI+ LQE       
Sbjct: 94  ATELTIVTHNLWGLSTNPVEAP----------------AVLSGLAPDIIALQEA--TRQA 135

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA----KDS 136
             V  +      +                    + +  +   +                 
Sbjct: 136 KPVVDQLEAAYPHIARCRS--------------VRILSRLPMLDSGCVRHPPDISFENAV 181

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                   AV   +E+   +  ++     ++ F  + ++    +       A+ L     
Sbjct: 182 PCDWELPPAVWARIELPDGRQAMIVSVHLTWPFPSAAQDCQRRNL------ARALAR--- 232

Query: 197 QKKESLVPFVIAGDFNRKINY---LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              E     ++ GDFN             D               +   +R         
Sbjct: 233 ---EPQDTLIVMGDFNAAAPSRALTRIERDLDLERRSIALPSWPSEGLFTRDGGIAPPLP 289

Query: 254 KIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +   ID+    +               +    I +     SDH P+  
Sbjct: 290 PMLVGIDHIFAGEA--------------WQTVAIHAGPDTGSDHRPLMA 324


>gi|301156464|emb|CBW15935.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 283

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 84/285 (29%), Gaps = 70/285 (24%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A +  L++WN++           K        D   L +      AD V LQE   +  
Sbjct: 66  AASRFHLITWNVH-----------KGQDTGWQEDLERLSK-----RADFVLLQEATQHQN 109

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           ++                    +    ++     +    K     Q  +   G       
Sbjct: 110 LSTF-----------------STALFVSSFSFNELLSGVKTFTQTQPEWYCGGGVAEPII 152

Query: 140 AGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              + A  + + +  G  + ++++HL +F +  S              Q + L  ++   
Sbjct: 153 QIPKVASIMNLPLEKGNSLLIINVHLINFEWGISAYQA----------QLKQLFSFVENH 202

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           +    P ++AGDFN          +    +     L      +D R            +D
Sbjct: 203 QG---PIIMAGDFNAW---NEERLNLVNNLIKKYGLNSVALSQDERVRFLGYP-----LD 251

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y  M       ++  +   +              SDH P+ ++++
Sbjct: 252 YIFMRG---VKVVSATSEVVT------------SSDHNPLLMEFE 281


>gi|261324744|ref|ZP_05963941.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33]
 gi|261300724|gb|EEY04221.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33]
          Length = 358

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 67/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 150 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 199

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 200 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 245

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N  +                +  
Sbjct: 246 ----------FQQSEQIEALSEQFRGLSENAILSGDLNAALWSATTKRI-------AELA 288

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 289 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 339

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 340 HLPVLVEFS 348


>gi|240172210|ref|ZP_04750869.1| hypothetical protein MkanA1_23044 [Mycobacterium kansasii ATCC
           12478]
          Length = 396

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 84/300 (28%), Gaps = 33/300 (11%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           VF     T +++    ++++NI  L      ++       T      L  Y       + 
Sbjct: 118 VFVGGVPTTTISGAFSMLTYNIAGLPFPLSSAILP-RFLYTKQIGQRLNSYY------VA 170

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            +QE   +     +  K+                             + K  R+ +Q++ 
Sbjct: 171 NVQE--DFAYHDFLVKKSDMPGQTPPSPPTLLWPIGVPFSDGLNTLAQFKVKRLDRQTWW 228

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
              A +  +  G   +   L    G+ I + ++H  +     +  N              
Sbjct: 229 QCSADNCLTVKG--FSYSQLQLPGGETIDLYNLHTNTGGGAFTNAN------------LA 274

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L ++I Q        ++ GDFN   +         +    N     + + +    +   
Sbjct: 275 QLTNYIQQN-SGGHAVIVTGDFNALYSDD--QSALLQFAANNLLTDAWVQVQGGPTSPPF 331

Query: 250 NL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                       +D           L    +S          S G+ LSDH P  + + +
Sbjct: 332 APTCKVGNECELLDKIFYRSGQGVTLTATGYSNEAPK--FFNSNGQPLSDHSPPMVTFQY 389


>gi|224146427|ref|XP_002198189.1| PREDICTED: inositol polyphosphate-5-phosphatase, 75kDa, partial
           [Taeniopygia guttata]
          Length = 689

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 78/316 (24%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S  E +  W                       DI  V  QE+         
Sbjct: 163 VGTYNVNGQSPTESLQPWLRCD---------------AEPPDIYCVGFQELDLTKEAFFF 207

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    +     +             I     V+ +    + +          
Sbjct: 208 NDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKAELALNISEVEVETVGTGI 267

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+ AV +  + +   + +++ HL +        N          Q  Q   +   
Sbjct: 268 MGRMGNKGAVAIRFKFHNTSVCIVNSHLAAHTEEYERRNQDFKDICSRMQFCQSDPNLPP 327

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N ++  L                    D   + +  N +   F +
Sbjct: 328 LTIGKHDVILWLGDLNYRLEELDVAKVKQLVEEKAFLELCQYDQLKRQMKANAAFEGFTE 387

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + S     K              R     D  +               + +        
Sbjct: 388 GEISFQPTYKYDAGSDDWDTSEKCRVPAWCDRILWKG------------QKVAQLSYRSH 435

Query: 288 RGKRLSDHCPISIDYD 303
              +LSDH P+S  +D
Sbjct: 436 MALKLSDHKPVSSVFD 451


>gi|148234791|ref|NP_001089663.1| sphingomyelin phosphodiesterase 3, neutral membrane (neutral
           sphingomyelinase II) [Xenopus laevis]
 gi|71682418|gb|AAI00235.1| MGC115457 protein [Xenopus laevis]
          Length = 659

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 81/286 (28%), Gaps = 31/286 (10%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DIVFLQEMGSYNAVAKVFPK 86
           N   L +   +       K+ T D   L            D + LQE+    A  K+  +
Sbjct: 322 NTKLLHKTSIIKKATARKKKHTDDI--LDHEISAFFPANLDFLCLQEVFDKRAAEKLKEQ 379

Query: 87  NTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
             +   Y    +  +S         +++ +    +   +    +     +   + A  + 
Sbjct: 380 LHYYFEYVLYDVGVYSCHGCCGFKFLNSGLLFASRYPILDATYHCYPNGRGIDALAA-KG 438

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           A+ + V++         +   S   L +L            +Q   L++W+++ ++S   
Sbjct: 439 ALFIKVQVGTTPQDQRIVGYISCTHLHALAGD----AVTRCEQLDMLQEWVSEFRKSTSS 494

Query: 205 F------------VIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                        VI GD N    +     +             R    ++        L
Sbjct: 495 SSAANPEELVAFDVICGDLNFDNCSSEDKLEQQHSLFTHYKDPCRLSPGEEKPWAIGTLL 554

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +   D  V   +  + +++       Y              HCP
Sbjct: 555 DPEGLYDEEVCTPDNLQKVLENEEGRKEYIVYPTSKN------HCP 594


>gi|329961876|ref|ZP_08299890.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328531316|gb|EGF58160.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 662

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/319 (10%), Positives = 80/319 (25%), Gaps = 76/319 (23%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            + + +  ++++ WNI       G                 +    ++  AD+V +QE  
Sbjct: 387 NSQAHSNIIKVLQWNIWHGGIHLGNEGQ-----------QRVLDLIRSTRADVVMMQEAY 435

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  +     + +   + +                +A+  +                
Sbjct: 436 GIQ--RMLADSLGYHLKTHSLKDN--------------LAMYSRFPL----------ETI 469

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ----WL 191
           ++         ++ +  NGK++ ++D  L+     +                A+     L
Sbjct: 470 AWREPFKSNPAKITL-PNGKRVMLIDCWLRYAYRPEYTSGYAEKGLDPSVWIAEDSILAL 528

Query: 192 KDW-------ITQKKESLVPFVIAGDFNRKINYLGNNDD-------------FWKTIDPN 231
            D        I    E+ +P +I GDFN   +                      + +  N
Sbjct: 529 PDIQNIYTKDIVPNLETGMPVIITGDFNSCSHLDWTERAKPLHQGYGPVNFPVSRYMQEN 588

Query: 232 DSLIRFPKEKDSRCNAN-------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                F ++                       ID+           +           D 
Sbjct: 589 GFKDSFREKNPDEVTYQGGTVAAIYGQMQMSRIDFIYYKGKL--KALSSKIVRTAPEIDY 646

Query: 285 IKSRGKRLSDHCPISIDYD 303
           +       SDH  +   ++
Sbjct: 647 V-----WASDHAAVLTVFE 660


>gi|326913290|ref|XP_003202972.1| PREDICTED: LOW QUALITY PROTEIN: synaptojanin-1-like [Meleagris
           gallopavo]
          Length = 1647

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 88/337 (26%), Gaps = 65/337 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-------AKNLDADIVFLQEMGSYN 78
           + +WN+N   +   ++    ++     D   +          +K +D   +  +EM   N
Sbjct: 596 VGTWNVNGGKQFRSIAFKNQTLTDWLLDAPSIAGIHEFQDRRSKPVDIFAIGFEEMVELN 655

Query: 79  AVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVRVLQQSYPL 130
           A   V      +  W          ++      ++    +     +R ++   ++     
Sbjct: 656 AGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVD 715

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                     GN+ AV + +  +   +  +  H  +       ++          + A+ 
Sbjct: 716 TVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAG------QSQVKERNEDFIEIARK 769

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSL 234
           L   + +   S       GDFN +I+                     D      +     
Sbjct: 770 LSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKELIRQQNWDSLIAGDQLINQKNSGQIF 829

Query: 235 IRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------------AYKF 269
             F + K +     K                    D  +  +                  
Sbjct: 830 RGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNAS 889

Query: 270 LIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
               S     +N   +   G+   + SDH P+    D
Sbjct: 890 FHDNSKVPYTWNPGTLLHYGRAELKTSDHRPVVALID 926


>gi|301610412|ref|XP_002934749.1| PREDICTED: protein angel homolog 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 63/200 (31%), Gaps = 11/200 (5%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKR----TTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI +    E  S   +  +R     +     + +   +++ADI+ LQE+   +
Sbjct: 155 DFTVLSYNILSQDLLEDNSHLYDHCRRPLLFWSYRLPNILKELVDMNADILCLQEVQEDH 214

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++        +    +       A +   V V    Y          
Sbjct: 215 YTTQIKPSLESLGYH--CEYKTRTGSKPDGCAICFKANKFSLVSVTPVEYYRPNISLLD- 271

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  + L++ +  K   V  +   +   L           + L+     +       
Sbjct: 272 ----RDNIGLVLLLRPKSQRVAPVICVANTHLLYNPRRGDIKLAQLAILLAEITSVAFTG 327

Query: 199 KESLVPFVIAGDFNRKINYL 218
           ++   P V+ GDFN      
Sbjct: 328 EKGFCPIVLCGDFNSVPGSP 347


>gi|302788222|ref|XP_002975880.1| hypothetical protein SELMODRAFT_104238 [Selaginella moellendorffii]
 gi|300156156|gb|EFJ22785.1| hypothetical protein SELMODRAFT_104238 [Selaginella moellendorffii]
          Length = 359

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 62/234 (26%), Gaps = 16/234 (6%)

Query: 26  LVSWNI---NTLSEQEGVSLW--KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            +S+NI   +   E      +       +       L Q  +    DI+ LQE+  +  +
Sbjct: 7   FLSYNILAADNAREHYRELYYHIPMRYVKWDWRKVRLVQEIEYWSPDILCLQEVDRFADL 66

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                K  +   +                    + + ++++            +    R+
Sbjct: 67  QGELVKRGYAGTFKRRTGTATDGCAIFWREKRFLLLEEESIDFKDYGLRDNIGQICVLRS 126

Query: 141 GNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
               A+E  V  I  + + V + H+        +              AQ L        
Sbjct: 127 TREAALEGDVSSIENQVLVVANTHILFNPKRGDI-----KLGQARFDFAQELSSSW---- 177

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                 ++AGDFN   +           +D +    R    + +          
Sbjct: 178 -GGAQVIVAGDFNSTPSSPLYRYISTAELDVSSLDRRSISGQIADGEGGYYRNP 230



 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 20/67 (29%)

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              +        + + K  +DY    +      + +  S  +          K  SDH  
Sbjct: 292 RDSQGEPLATTYHKKFKGTVDYIWHTERLRPLRVVDMLSVDVLRHTGGLPSQKWGSDHLA 351

Query: 298 ISIDYDF 304
           +  + +F
Sbjct: 352 LVCEMEF 358


>gi|118083842|ref|XP_416706.2| PREDICTED: similar to synaptojanin 1 [Gallus gallus]
          Length = 1588

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 88/337 (26%), Gaps = 65/337 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-------AKNLDADIVFLQEMGSYN 78
           + +WN+N   +   ++    ++     D   +          +K +D   +  +EM   N
Sbjct: 537 VGTWNVNGGKQFRSIAFKNQTLTDWLLDAPSIAGIHEFQDRRSKPVDIFAIGFEEMVELN 596

Query: 79  AVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVRVLQQSYPL 130
           A   V      +  W          ++      ++    +     +R ++   ++     
Sbjct: 597 AGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVD 656

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                     GN+ AV + +  +   +  +  H  +       ++          + A+ 
Sbjct: 657 TVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAG------QSQVKERNEDFIEIARK 710

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSL 234
           L   + +   S       GDFN +I+                     D      +     
Sbjct: 711 LSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKELIRQQNWDSLIAGDQLINQKNSGQIF 770

Query: 235 IRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------------AYKF 269
             F + K +     K                    D  +  +                  
Sbjct: 771 RGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNAS 830

Query: 270 LIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
               S     +N   +   G+   + SDH P+    D
Sbjct: 831 FHDNSKVPYTWNPGTLLHYGRAELKTSDHRPVVALID 867


>gi|167624147|ref|YP_001674441.1| endonuclease/exonuclease/phosphatase [Shewanella halifaxensis
           HAW-EB4]
 gi|167354169|gb|ABZ76782.1| Endonuclease/exonuclease/phosphatase [Shewanella halifaxensis
           HAW-EB4]
          Length = 293

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 77/279 (27%), Gaps = 63/279 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            K+ + +WN+           +K S +        L +      +D++ LQE     A+ 
Sbjct: 61  GKLDITTWNL-----------YKQSGEGWDDTLKQLVE-----RSDLLLLQEAQLTKALN 104

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                    +  +           S +     +    +   +    +       +F ++ 
Sbjct: 105 SFVESQKLSMLLAQ--------AFSFDGEPVGVMNLTREPALSSCVFRKAEPYINFPKSM 156

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               V   +  +  ++ V++IH  +F                       L+      ++ 
Sbjct: 157 L---VSYYLLSDLSQLLVVNIHSINFTIGLDEY-------------LAQLRIVEAAIQDH 200

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P + AGD N    +  +  +  K +     L       DSR            +D+  
Sbjct: 201 KGPVIFAGDMN---TWSDSRFETIKQLANRTGLKEAIPAADSRTEI-----FGQHLDHIF 252

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 + +  ES                  SDH P+  
Sbjct: 253 YRD--LELVKAESIITSS-------------SDHNPVKA 276


>gi|298712122|emb|CBJ33002.1| carbon catabolite repressor protein, putative [Ectocarpus
           siliculosus]
          Length = 546

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 22/245 (8%)

Query: 22  QKVRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           + + + ++N+   + ++ G        +     +  + ++ K + +D+V LQE+     V
Sbjct: 72  ETLSITTFNVLAPIFKRVGNGRESEFRETYLERHKAILKHIKGVGSDVVCLQEL----WV 127

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A+    + +       R+    + +S  D   A  V++    +  Q   L G     +  
Sbjct: 128 AEQEMVDMYRRGLRGYRMFTLPRTESRGDG-VACFVKEGIEVLDTQDLRLKGVGGRVALV 186

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                   +   + +++ V + HL                 SL++ +   L         
Sbjct: 187 LRLGIGGGVEGGDRREVVVANTHLLFP------HARLWVDWSLVANETNDLAHL------ 234

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-IDY 259
              P V+ GDFN + +         +    +  +   P    SR   + N R +   +DY
Sbjct: 235 ---PVVLCGDFNGRSSGRVYRHLAERGFRCSYEVTLGPGADISRWITHLNHRGEELGVDY 291

Query: 260 FVMDQ 264
                
Sbjct: 292 IWFRN 296


>gi|260912894|ref|ZP_05919379.1| endonuclease/exonuclease/phosphatase [Pasteurella dagmatis ATCC
           43325]
 gi|260632884|gb|EEX51050.1| endonuclease/exonuclease/phosphatase [Pasteurella dagmatis ATCC
           43325]
          Length = 359

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 58/248 (23%), Gaps = 45/248 (18%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L    +    D+V   E        K+        +     L N           
Sbjct: 113 RQVDKLLMLIEKWQPDVVLTLET-DLWWEEKLSSLEEQYAYTVKIPLDNL---------- 161

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +    +                     +G+ I +  +H       +
Sbjct: 162 YGMHLYSRLPLRNTEVRHWVQEDIPSIYTETCLP-------SGEWIHLYCLHPMPPTPTE 214

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           S  +T   +  LL  Q         +  E+    ++ GD N       +    ++     
Sbjct: 215 SSTSTQRDAELLLVGQ---------EISENNQSVLVFGDLNDVAWSSTSR--LFQKTS-- 261

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L              K    + P+D+     +                  DI+     
Sbjct: 262 GLLDPRVGRGLYSTFHAKYPFLRWPLDHIYHSNDFMMR--------------DIRVLSDI 307

Query: 292 LSDHCPIS 299
            SDH P+ 
Sbjct: 308 GSDHFPVY 315


>gi|326431951|gb|EGD77521.1| hypothetical protein PTSG_08619 [Salpingoeca sp. ATCC 50818]
          Length = 1224

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/330 (12%), Positives = 91/330 (27%), Gaps = 69/330 (20%)

Query: 16  CTASVAQKVRLVSWNINT-----LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI-- 68
            T  +  ++ + +WN+N      LS         + + +TT D +           DI  
Sbjct: 578 FTTELPARIVVGTWNVNAQKPSQLSTNPTNPGLHDWLVQTTEDSSA---------PDIFA 628

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-------DIHTAIAVRKKNV 121
           V LQEM    A   +   +     ++   L    K +           I   +  R  + 
Sbjct: 629 VGLQEMIDLKAKNMLARSSAIASEWAARILQTIGKDEYFLVVKQQLVGICVFVFARTDHK 688

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++          +  + GN+  V + +  +   I  +  HL +        N      
Sbjct: 689 HCIRGVRTHYVKTGAGGKMGNKGGVAMSLRFHSTSICFVCAHLAAGKAHLEERNQDYNDI 748

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------------------- 219
           +      +       +K +S    +  GDFN +I                          
Sbjct: 749 TAKINFGK------GRKLDSHDVVIWFGDFNYRIEGSKDIVRETCEAGHWLDLLCKDQLT 802

Query: 220 NNDDFWKTIDPNDSLIRFPKEK------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
            +       +  +      +            + ++  R     D  +      + +  +
Sbjct: 803 ISKADGHVFEEFEEAPVTFRPTYKYDVNTDTFDTSEKQRAPAWTDRVLFRGEGLECVRYD 862

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +            ++SDH P+    +
Sbjct: 863 CVNTL------------KMSDHRPVICVLN 880


>gi|114706662|ref|ZP_01439563.1| hypothetical protein FP2506_12959 [Fulvimarina pelagi HTCC2506]
 gi|114538054|gb|EAU41177.1| hypothetical protein FP2506_12959 [Fulvimarina pelagi HTCC2506]
          Length = 255

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/281 (11%), Positives = 74/281 (26%), Gaps = 47/281 (16%)

Query: 30  NINTLSEQEG------VSLWKNSVKRTTSDYTLLRQY---AKNLDADIVFLQEMGSYNAV 80
           N+  L   +G         W++      +    + Q     K    D+  L E+   +  
Sbjct: 8   NLGYLRGIDGSIRQHVGRFWRHVYTPLAAQTESIAQLTAKIKEFSPDLCCLVELDRGSIT 67

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + F +    I      +     +       +   V            P+          
Sbjct: 68  NRFFDQLP-TIGSELMPVSVAHGKYGMRRPLSPFHVSYGKSNAFLAKRPVTATDRYLRDG 126

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +   ++ ++     + VL +HL                 +  ++Q + L  W+ +   
Sbjct: 127 RKKLVYDIRLQTETLAVRVLVVHLSLV-------------ENERARQIRELSHWVAE--- 170

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++ GDFN             + +  +  L    K  +           +  +D  
Sbjct: 171 DHTSTIVVGDFNAFRGESE-----LRPLLASGHLYHANKGMEPTFRFGPW---RAALDTC 222

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           ++ ++                        +  SDH  + +D
Sbjct: 223 LISEDLRNHAKITIV-------------DQPYSDHQMLVMD 250


>gi|290998954|ref|XP_002682045.1| predicted protein [Naegleria gruberi]
 gi|284095671|gb|EFC49301.1| predicted protein [Naegleria gruberi]
          Length = 311

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 74/291 (25%), Gaps = 72/291 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +R+ S+NI  L              +  +  + L +       D++ +QE+   +  
Sbjct: 57  SNGIRICSFNIQVLGT---------KKMQKQNVASALTKILSQY--DLILVQEVRDSSDQ 105

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                                           A  +  +          L       +  
Sbjct: 106 --------------------------------AFHILARL---------LGEGDKRRNNW 124

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R     + +     +   D  LK+  F     +             Q + + +   ++
Sbjct: 125 FERAPFTFVYQ-----LVTSDAKLKNVQFAIMGCHIKPSDAVNELNHMQEVYEQLK-NEK 178

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++ GDFN    Y+                     + D+   ++         D F
Sbjct: 179 FYENTIMMGDFNAGCGYVSGKQLAALKFRNGKYTWLITDDMDTTVASSSCPY-----DRF 233

Query: 261 VMDQNAYKFLIQ-------ESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
           ++ +      I         S S   ++     +  +    SDH PI +  
Sbjct: 234 IVSKGMADKKIADGAAFEINSVSVYRFDTALSLTGAQAAEVSDHYPIELKL 284


>gi|239817509|ref|YP_002946419.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110]
 gi|239804086|gb|ACS21153.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110]
          Length = 255

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 84/284 (29%), Gaps = 45/284 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             ++R+ +WNIN              V RTT         A  LDAD++ L E    +  
Sbjct: 4   GNRMRIATWNINH------------RVGRTTFRPEA-AHAACALDADLICLNEFYPKSEE 50

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                      +      I+ +     +     IA RK   +V  Q  P        +  
Sbjct: 51  ESFRGVLFESGYCHQ--RISPAAPCGVHANRVLIASRKPIEQVDLQ-VPTHEPHLRTNVL 107

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G R            +I ++ + + ++  L+              + A  L   + +   
Sbjct: 108 GVRT----------DEITIVGMRVPAYDRLEVAH------LLAAWEWASDLAARLCE--- 148

Query: 201 SLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
              P VI GD N  +  LG       + I  N              +       +  ID+
Sbjct: 149 --QPAVILGDLNVSLKSLGYQKGRHLQAILANGWTRVATVGATYHGHNGV----RSEIDH 202

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++     +             E  +  +   +SDH  +  D +
Sbjct: 203 VLVT---RQCRATHPVVLTTIGEFSLCGQANSISDHAVLMCDLE 243


>gi|168044587|ref|XP_001774762.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673917|gb|EDQ60433.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 293

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/171 (10%), Positives = 51/171 (29%), Gaps = 4/171 (2%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           + +R++ WN+  + L++       +           LL       D  ++ LQE+  ++ 
Sbjct: 39  EGLRVMQWNVLADGLAQSGDFDRVEKKFLEWNHRAPLLLGRILKDDPHVICLQELNHFDD 98

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                P+     +         S            A+  K+ R+       +  +D   +
Sbjct: 99  F--FLPELKRHGYVGEYWQKPCSAAQKFESPADGCAIFYKSSRLQLLKSDTIQYEDPKGK 156

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             N+  +             + ++         +  +     + +  +A+ 
Sbjct: 157 KLNQGGLTCRFRDIDADQDFVLVNTHLKVGHLDVYRSEILWVTSILDRAKR 207


>gi|86357472|ref|YP_469364.1| hypothetical protein RHE_CH01845 [Rhizobium etli CFN 42]
 gi|86281574|gb|ABC90637.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 209

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 56/199 (28%), Gaps = 17/199 (8%)

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQQSY 128
           Q +  +  ++   P +      ++   +         D   A  VRK +  +   L   +
Sbjct: 23  QRVNLFQEISAALPGHDAFFCPASRGELFDGDAAIVADFGLATFVRKSHSVIAQALDFVH 82

Query: 129 PLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
               A         R A  + +    +G+ + +  +H          +       +   Q
Sbjct: 83  GSFSADGWGEHPRPRNAHCIRLFSHAHGRAVTIAHMH-------GLRDPAGKRDTAQRQQ 135

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           QA  L   I +        V+ GDFN   +        ++ +                  
Sbjct: 136 QALALAGLIGRIWPGDEGLVVCGDFNVLPDS-----ATFRVLARLGLSDLVTGSGLVDTR 190

Query: 247 ANKNLRNKIPIDYFVMDQN 265
            +  L+     DY ++   
Sbjct: 191 TSHYLKQGRFADYMLITPG 209


>gi|225463574|ref|XP_002268710.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1482

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 69/280 (24%), Gaps = 51/280 (18%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
           +N       V +W +     +S   +++   ++   D+  LQE         V       
Sbjct: 363 VNGDEIPSAVEIWVDERANDSSKRKVIKALIRSQRVDVFCLQETKIQAMSEGVVRSLGTG 422

Query: 91  IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150
            F     L               I V      +      +     S            + 
Sbjct: 423 RFLGWGALEASGSAG-------GILVCWDRRTLDVLDVEVGQFSISCRVRNVEDGFCWMF 475

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
                                            L ++   ++          VP+ + GD
Sbjct: 476 TGVYGPF-------------------SRDERECLWEELGAIRGLW------DVPWCLGGD 510

Query: 211 FNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
           FN  +     +           F + +D  +      +      N  +  ++   +D F+
Sbjct: 511 FNITLLQGERSRQGRITGAMRRFAQMVDELELTDLPLQGGRCTWNGGRGSQSWARLDRFL 570

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           + QN              ++        +  SDH PI ++
Sbjct: 571 VTQN----------WLDHFSGVVQSRLPRPTSDHFPILLE 600


>gi|147862335|emb|CAN81919.1| hypothetical protein VITISV_030820 [Vitis vinifera]
          Length = 1136

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/259 (10%), Positives = 64/259 (24%), Gaps = 53/259 (20%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
              +++ + +N   D++ +QE         V        F     L              
Sbjct: 644 KRKIIKTFIRNQKVDLLCIQETKIQPMSEGVVRSLGSRRFLDWRALDADGAAG------- 696

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLD 171
            + +      +                   + ++    + +    +WV       F    
Sbjct: 697 GLXICWDKRSLEVVD-----------WEEGQYSLXCRFKYVEDGAVWVFTGVYGPFTK-- 743

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------- 223
                            + L            P+ + GDFN  +     +          
Sbjct: 744 ----------EERDCLWEELGAVRGIW---DEPWCLGGDFNSTLYQRERSRQGRITPTMR 790

Query: 224 -FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
            F   ID    +    +      +   N  +   +D F++  +              ++ 
Sbjct: 791 RFAHIIDDLGLVDLPLQGGVFTWSRGLNNXSWARLDRFLVSPSWLDK----------FSG 840

Query: 283 DDIKSRGKRLSDHCPISID 301
              +   + +SDH PI ++
Sbjct: 841 VIQRRLXRPVSDHFPILLE 859


>gi|120435872|ref|YP_861558.1| hypothetical protein GFO_1518 [Gramella forsetii KT0803]
 gi|117578022|emb|CAL66491.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803]
          Length = 367

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 75/270 (27%), Gaps = 44/270 (16%)

Query: 33  TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92
            ++E  G  L  ++V +   +  L     K LD DI    E  S   +A           
Sbjct: 97  NVNENSGFMLLTSNVLQKNKETALFIAEMKKLDPDIAVFTETDSNWELA----------I 146

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
                     K+ +  D    + +  K      Q   L+        +  +         
Sbjct: 147 EEGIGSNYPYKKLAPLDNTYGMLLYSKLKLRNPQIKYLVDDSIPSIHSEIQL-------R 199

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
           +G+ I +  IH        +  ++   +          +     + ++S +P ++ GDFN
Sbjct: 200 SGEWIKLHAIHPTPPMPQHNPSSSDRDA---------EMMKIALEARDSDLPVMVIGDFN 250

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                   +   ++++   + L               +   K  +D+  + +      I 
Sbjct: 251 DVAWSSTTS--LFQSV--GELLDVRKGRSFYNTFDATSFIMKWSLDHIFVSEEFRASKID 306

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                               SDH P     
Sbjct: 307 VGSDIK--------------SDHYPFYAQL 322


>gi|320590299|gb|EFX02742.1| phosphoinositide phosphatase [Grosmannia clavigera kw1407]
          Length = 1297

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/318 (11%), Positives = 77/318 (24%), Gaps = 48/318 (15%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           S    +R  + ++N+               +  +      L +         V  QE+  
Sbjct: 620 SSTDVIRIWVGTFNL-NGRLDGLGEDLSPWLCPSKVSADALPEIVA------VGFQEIVE 672

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL------ 130
            +    +    T    +    L   ++R +       + +R   +        +      
Sbjct: 673 LSPQQIMNSDPTRKQEWEAVVLDTLNRRATAVGGENYVLLRSGQLVGAALCIFVKASSLA 732

Query: 131 --------LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                   +        AGN+ AV + ++ +   I  +  HL +        N    +  
Sbjct: 733 KIKNVEGGVKKTGLSGMAGNKGAVAIRLDYSSTPICFVTAHLAAGFANYEERNRDYLTIH 792

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                   L+    +  +     +  GDFN +I             +  +SL    +   
Sbjct: 793 HG------LRFQRNRGIDDHDAVIWFGDFNYRIGLGRERAMDLVRANDLESLYENDQLNL 846

Query: 243 SRCNANKNLRNKIPIDYFVMDQNA-----YKFLIQESFSEILYNEDDIKSRGK------- 290
                                                   I    D I  +G        
Sbjct: 847 QMVAGLSFPYYSEA--RIYFPPTYKFDVGRDEYDTSEKQRIPAWTDRILRKGSNLRQVSY 904

Query: 291 -----RLSDHCPISIDYD 303
                R SDH P+  ++ 
Sbjct: 905 NCAPLRFSDHRPVYAEFS 922


>gi|120553484|ref|YP_957835.1| exodeoxyribonuclease III Xth [Marinobacter aquaeolei VT8]
 gi|120323333|gb|ABM17648.1| exodeoxyribonuclease III Xth [Marinobacter aquaeolei VT8]
          Length = 268

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/271 (9%), Positives = 63/271 (23%), Gaps = 54/271 (19%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
            +    DAD+V +Q+  M +Y    +      +  ++    L  H               
Sbjct: 21  DWLAEQDADVVCVQDHRMRAYEIEDRNLIPEGYEAYFIDGELNEHGGVGIYT-------- 72

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                    + +P        +   +R    +  + +   +  +          + +   
Sbjct: 73  ---------RHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLAPCALGREEELIGED 123

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------N 220
                    +  +     + +       F++  +     +                    
Sbjct: 124 DLTVLDHKDEFMEAFGIHMQKTLRKRRQFILCANLQTAHHVTDASPLYHKTDFSGFLPHE 183

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQ 272
                +  D    +  F +                         +DY ++     K +  
Sbjct: 184 RAWLDRLFDEMGCIDAFREINKQSNQFTWWPEQTEGSRKKAGIRVDYHLLTPGIRKTIRD 243

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +             R SDH P+ +DYD
Sbjct: 244 GWIDDET-----------RFSDHAPVIMDYD 263


>gi|194225225|ref|XP_001493083.2| PREDICTED: similar to Protein angel homolog 1 [Equus caballus]
          Length = 650

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 54/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 224 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDH 283

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 284 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 343

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 344 VGLVLLLQPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLAQMAVLLAEVDKVARLSD- 402

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N        N
Sbjct: 403 -----GSHCPIILCGDLNSVPESPLYN 424


>gi|270015674|gb|EFA12122.1| hypothetical protein TcasGA2_TC002268 [Tribolium castaneum]
          Length = 439

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 83/316 (26%), Gaps = 55/316 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAVAK 82
           + ++N+ T +    ++          +D   L          I+  QE+        +  
Sbjct: 8   VGTYNVGTSTPDIKLNSLLGLPDDHKTDKLQLPDIY------ILSFQEVKAQPQNMLLDA 61

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +F               N+ K  S         +   +K++  +++              
Sbjct: 62  LFDDPWTYACKELLDTFNYVKIKSVRLQGLLLNVYCLRKHLLNIREIESDYTRTGLSGMW 121

Query: 141 GNRRAVELLVEINGKKIWVLDIHL-KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           GN+ AV + + I G  +  ++ HL      L      Y+          +   +      
Sbjct: 122 GNKGAVSVRLSIYGCSLCFVNSHLSAHDNQLKDRVEDYNNIIKDQEFHVEETTEIFFH-- 179

Query: 200 ESLVPFVIAGDFNRKINYLGNNDD-----------------------------FWKTIDP 230
                    GD N ++    +                                 +  ++ 
Sbjct: 180 ---DYVFWMGDLNFRLLEEYDQTPEEIERDIVKNELKKLFTFDQLRYVMRKGEAFSELEE 236

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED---DIKS 287
            D       + +   N     R     D  +        +   ++  +    D       
Sbjct: 237 KDPEFPPTFKFEVGTNRYDFKRRPAWCDRILY------RVNPHNYENVTLKVDQLSYKHH 290

Query: 288 RGKRLSDHCPISIDYD 303
              +LSDH P++ +++
Sbjct: 291 PSYQLSDHKPVTAEFN 306


>gi|327262057|ref|XP_003215842.1| PREDICTED: synaptojanin-2-like [Anolis carolinensis]
          Length = 1493

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 90/339 (26%), Gaps = 66/339 (19%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQE 73
           +++R+   +WN+N   + +   L  + +     D   L   ++  D    ADI  V  +E
Sbjct: 527 KRIRVAMGTWNVNGGKQFKSNILGTSELTDWLLDSPKLSGVSEFQDDHCPADIFAVGFEE 586

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
           M   NA   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 587 MVELNAGNIVNASTTNRKMWGEQLQKALSRTHRYILLTSAQLVGVCLFIFVRPFHVPFIR 646

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        + GN+ AV +  +     +  +  HL +       ++          
Sbjct: 647 DVALDTVKTGMGGKTGNKGAVAIRFQFYSTSLCFICSHLTAG------QSQVKERNEDYK 700

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFWKTID 229
           +  Q L   + +   S       GDFN +I+                     D   +   
Sbjct: 701 EITQKLSFPMGRNMFSHDYVFWCGDFNYRIDLSYEEVFYFLKRQDWTTLLEFDQLQQQKS 760

Query: 230 PNDSLIRFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFS 276
                  F +   +     K              R     D      +           +
Sbjct: 761 NGKIFRDFHEGTINFGPTYKYDVGSEAYDTSDKCRTPAWTDRVLWWRKKLPIDKTAGEIN 820

Query: 277 EILYNED---------------DIKSRGKRLSDHCPISI 300
               +                        + SDH P+  
Sbjct: 821 LFDTDLSAETKIRPIWSPGALMYYGRAELQASDHRPVLA 859


>gi|318606889|emb|CBY28387.1| hypothetical protein Y11_41431 [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 253

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 91/295 (30%), Gaps = 73/295 (24%)

Query: 14  VPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +P  A +     +R++ WNI                K+  + +  + +     DA ++ L
Sbjct: 24  LPPGAPLPTTEFLRVMVWNIF---------------KQQRAQWLSVLKEFGR-DAQLMLL 67

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE  +   + +                     + ++     A+      V  L  ++P+ 
Sbjct: 68  QEAQTTPELVRFA---------------TSHYQAADQVPAFALPQHPSGVMTLAATHPVY 112

Query: 132 GAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                      R +   L+ +    +G+ + V++IH  +F     + +           Q
Sbjct: 113 CCPLREREPLLRLSKSALITVYPIHDGRLLMVVNIHAVNFSLGVDVYSK----------Q 162

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + + + I   +    P ++AGDFN       N    +      + +             
Sbjct: 163 LEPIGEQIAMHRG---PVILAGDFNAWSRQRVNALQCFAQGLGLEEVEFSTD-------- 211

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           N++     P+D+                        D      R SDH P+ +++
Sbjct: 212 NRSRAFGKPLDFVFYRG---------------LTLADTSVLVTRASDHNPLLVEF 251


>gi|299142371|ref|ZP_07035503.1| endonuclease/exonuclease/phosphatase [Prevotella oris C735]
 gi|298576093|gb|EFI47967.1| endonuclease/exonuclease/phosphatase [Prevotella oris C735]
          Length = 361

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 72/262 (27%), Gaps = 45/262 (17%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q +++   N       +  + +             L      +D DIV L E+ +   + 
Sbjct: 29  QDLKVFQLNT-WFGATQVNNAYNG-----------LVDVINQVDPDIVLLCELRNDLLLK 76

Query: 82  KVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           K+   +  +           + K     +  T + V  K      +  P           
Sbjct: 77  KIPDGDGEYTHRLCQSLKTKYQKDYYGKNHGTFVGVLSKYEIKSFKVLPAPTDN------ 130

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFL---------------------DSLENTYSP 179
                +++ V++ G+++    +HL    +                      DS       
Sbjct: 131 ---YMIKVTVDVRGQEMTFYSVHLDYKHYACYLPRGYNSGPDWSKLPNPITDSKRIMKDN 187

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFWKTIDPNDSLIRF 237
             S   +  +   D    + +     V+ GDFN    +++  N  D +            
Sbjct: 188 RLSTRDEAMEMFLDDARSEMDRGRIVVLGGDFNEPSDLDWQANTKDMYSHNGVIADWDCS 247

Query: 238 PKEKDSRCNANKNLRNKIPIDY 259
              + +        +   P+ +
Sbjct: 248 VMLRKADFVDTYREKFPNPVTH 269


>gi|297570736|ref|YP_003696510.1| endonuclease/exonuclease/phosphatase [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296931083|gb|ADH91891.1| Endonuclease/exonuclease/phosphatase [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 339

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 78/292 (26%), Gaps = 66/292 (22%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +  TA     + ++++N        G                 + Q A+   AD++ L E
Sbjct: 110 ITATARGNGDITVLTYNTLGGKTTPG----------------QIAQLAEANGADVIVLAE 153

Query: 74  MGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                   + ++  K      +       +     +    T + + +   +  Q      
Sbjct: 154 TAGDRGHELVRLLAKRGLRFQHFDTATSKYDPEFRS----TILLISETLGKYEQSDTAPA 209

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            A    +R          V  NG +I  +        F+DS             +Q + +
Sbjct: 210 EAAAVSARP---------VAGNGPEIVGVHPIAPMPRFVDS-----------WRKQTRSV 249

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            +  ++        ++AGDFN  I++        +     D               N   
Sbjct: 250 YELCSRPN-----IIVAGDFNSTIDH-----QLAQGFTCGDGAKDAGSGAVGTWPVNTPA 299

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               PID  +   +              +   D        SDH  + +   
Sbjct: 300 TLSAPIDRVLYSGS--------------FRGADAAIVTVGGSDHRGLLVRLS 337


>gi|281357785|ref|ZP_06244271.1| Endonuclease/exonuclease/phosphatase [Victivallis vadensis ATCC
           BAA-548]
 gi|281315732|gb|EFA99759.1| Endonuclease/exonuclease/phosphatase [Victivallis vadensis ATCC
           BAA-548]
          Length = 286

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/265 (8%), Positives = 69/265 (26%), Gaps = 43/265 (16%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                   + ++   D++  QE+   ++ +       W   Y+                 
Sbjct: 40  ERIEETANWLRSRKPDVILFQEIARQSSESFARQAKLWDHSYAAVCKPWQDYSIGMTSKR 99

Query: 112 TAIAVRKKNVRVLQQSY---PLLGAKDSFSRAGNRRAVELL-----------VEINGKKI 157
               +  +   +               S   +  R AV +            +   G+K+
Sbjct: 100 PFEMLEMRIDGLHHGYILARIDGVYYMSIHLSPFRYAVRIRETEIYAKRLKPLLAAGEKV 159

Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            ++        +  +  N+ + +      + +   + +                N   ++
Sbjct: 160 IMMGDFNNPSPYDAARVNSNAAALEARRYETRPHIENLR---------------NGFFDF 204

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
              ++     ++                         + ID  ++ +N    +++     
Sbjct: 205 QCMDNLLEAGLEDVCFFWMKKHNYRPDVG--------VRIDMAMLSRNLEDQVVEA---- 252

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
             Y +   +   + LSDH P+ +  
Sbjct: 253 --YVDTTRREFFQTLSDHYPVILTL 275


>gi|114705004|ref|ZP_01437912.1| Endonuclease/exonuclease/phosphatase family protein [Fulvimarina
           pelagi HTCC2506]
 gi|114539789|gb|EAU42909.1| Endonuclease/exonuclease/phosphatase family protein [Fulvimarina
           pelagi HTCC2506]
          Length = 334

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 68/301 (22%), Gaps = 64/301 (21%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           A++  L     +VA   R       T    + +           +D        + L+AD
Sbjct: 84  AVLALLSTTPFTVADTSR-----TQTAGNGDRLYSHLQMNLLFDADTAPAVALIRELEAD 138

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            V LQE       A     + +           H      +       +  +        
Sbjct: 139 FVTLQEAPPRWIKALQAVTDIY----------PHRFACGASVPVGGPVILSRWPIEAGSE 188

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                 K +   A  R A+         K+ ++  HL                      Q
Sbjct: 189 ----ECKANLGFASARVAL-----GKDGKLTLVSQHLHWPWPFQQ------------WPQ 227

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L   +        P +I GDFN                    S     +        
Sbjct: 228 IDALSGALRGLP---RPLLIGGDFNATPWSAAIAS------FAEASETIPIEGIGPTFAP 278

Query: 248 NKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    +        ID  +  +                +    ++     SDH P+   +
Sbjct: 279 SDLPASWKRSIGLAIDNVLASREI--------------DILSTRTLKPTASDHLPVLTRF 324

Query: 303 D 303
            
Sbjct: 325 S 325


>gi|256060756|ref|ZP_05450919.1| AP endonuclease domain-containing protein [Brucella neotomae 5K33]
          Length = 322

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/249 (10%), Positives = 67/249 (26%), Gaps = 50/249 (20%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                   ++  D+V L+E+   +A+ +    +    +  +    +             +
Sbjct: 114 EQALSLIAHIRPDVVTLEEV---SAMWREKFGHIASAYPYSIFCPHPGAVF-------GV 163

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +   +   +                      V+  G+ + V  +HL          
Sbjct: 164 AILSRRPFIADSTPACDPKGMM---------AVASVDFGGRPVDVAALHLHWPWP----- 209

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      QQ++ ++    Q +      +++GD N  +                +  
Sbjct: 210 ----------FQQSEQIEALSEQFRGLSENAILSGDLNAALWSATTKRI-------AELA 252

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
              P          + L                   I ++F++       I  +    SD
Sbjct: 253 AMTPAPPTGPTWLYRRLP---------ASLRFAGLPIDQTFAKGRVAISKITRQQPIGSD 303

Query: 295 HCPISIDYD 303
           H P+ +++ 
Sbjct: 304 HLPVLVEFS 312


>gi|218202105|gb|EEC84532.1| hypothetical protein OsI_31265 [Oryza sativa Indica Group]
          Length = 365

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 71/257 (27%), Gaps = 33/257 (12%)

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           V  QE+ + +A  +   +  +    + + +           I  ++ VR      +    
Sbjct: 95  VLHQEITNSSATERSAQEEHFRCIMNKQMVG----------IFVSVWVRSNLRPYIHHLN 144

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL--LSQ 186
                       GN+ +V +   ++      +  HL S      +      +  +   ++
Sbjct: 145 VSCVGSGIMGYLGNKGSVSIRFVLHETSFCFVCCHLASGGKQGDVLLRNFDAADILVRTR 204

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDP 230
                   + +K       V+ GD N +I+                    ND        
Sbjct: 205 FPGGATQELPKKILDHDQVVLLGDLNYRISLEEAETRLLVEDKNWSILLENDQLLIEFST 264

Query: 231 NDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDI 285
                 + +   +     K      +     D  +  +  A  +  +  +      +   
Sbjct: 265 GRHFDGWQEGLITFSPTYKYHPNSDQYYWCFDGALGKKKRAPAWCDRILWRGKGLKQIQY 324

Query: 286 KSRGKRLSDHCPISIDY 302
            +   RLSDH P+   +
Sbjct: 325 DTCNYRLSDHRPVRAVF 341


>gi|321265341|ref|XP_003197387.1| hypothetical protein CGB_M3420C [Cryptococcus gattii WM276]
 gi|317463866|gb|ADV25600.1| Hypothetical Protein CGB_M3420C [Cryptococcus gattii WM276]
          Length = 527

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 59/214 (27%), Gaps = 16/214 (7%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT-LLRQYAKNLDADIVFLQEMGSYN 78
             +K ++++WN+   +         +   R       LL ++  +   DI+ LQE     
Sbjct: 85  QGKKAKIITWNLLAQTLVRRELFPGSDCLRWADRKPMLLAEFVHHSSNDIICLQECDK-- 142

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +    P      +                        + + + +  +         +  
Sbjct: 143 -LPDFLPALPQHDYIKGTGPGKLHGLVVLYRKDRFSLRQSRLIHLDFEEIHPRPGNLTAG 201

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE--------NTYSPSCSLLSQQAQW 190
             G+    E+     G +       L +    D             +        +QA  
Sbjct: 202 EDGDESLEEVRRRRGGSRQTKNVGLLVALEGKDGEGVVIATTHLFWHPKFVYERVRQALL 261

Query: 191 LKDWITQKKESLV----PFVIAGDFNRKINYLGN 220
           L   I   +++      P V+AGD N + +    
Sbjct: 262 LVRAIRCFQKANNCTTWPVVLAGDLNTQPSEATY 295


>gi|150865047|ref|XP_001384099.2| RNA exonuclease NGL2 (Carbon catabolite repressor protein 4
           homolog) [Scheffersomyces stipitis CBS 6054]
 gi|149386303|gb|ABN66070.2| RNA exonuclease NGL2 (Carbon catabolite repressor protein 4
           homolog) [Scheffersomyces stipitis CBS 6054]
          Length = 463

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 72/267 (26%), Gaps = 31/267 (11%)

Query: 12  FLVPCTASVAQK---VRLVSWNINTLSEQEGVSLW-KNSVKRTTSDYTLLRQYAKNLDAD 67
             +P T S+ +    V+++S+NI   S           +  +  +    L +  K+ +AD
Sbjct: 46  LALPGTDSLDEPEFRVKIMSYNILAQSLIRRTLFPTNGAALKWPNRSKALLEEFKHYNAD 105

Query: 68  IVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           I+ LQE+      +  +K F K  +   + +    NH                 +   V+
Sbjct: 106 ILCLQEVDVIQFKSFWSKEFDKLGYNHKFYSCGTKNHGVAIVFRKD----MFIFRYQTVI 161

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW---------------VLDIHLKSFCF 169
                     D+      R   + +  +   +                 ++      F  
Sbjct: 162 NYDKEDTDPSDNIELPPPRTITQNIGLLAFLEFTPAVLKKYPKVRERNGLIIGTTHMFWH 221

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                     +  +L +  +     ++             +GD N +           K 
Sbjct: 222 PFGTFERTRQAFLVLYKY-KQFMKTLSTTIGNSKNFYTFFSGDMNSQPYDCPYLSITAKP 280

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +  +           +        RN 
Sbjct: 281 VSYDSRAKNV--ITCALSYQYSKRRNS 305


>gi|83643055|ref|YP_431490.1| hypothetical protein HCH_00146 [Hahella chejuensis KCTC 2396]
 gi|83631098|gb|ABC27065.1| conserved hypothetical protein [Hahella chejuensis KCTC 2396]
          Length = 418

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 99/381 (25%), Gaps = 100/381 (26%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + VR  ++N  +L+      L  +      +    + +  +    D++ + E     A
Sbjct: 37  STETVRFATFN-ASLNRSAPGELIADLNSGDNAQIQAVAEIIQRTQPDVLLINEFDYDAA 95

Query: 80  --VAKVFPKNT------------WCIFYS----------------------TERLINHSK 103
              A++F +N             +   YS                         L N + 
Sbjct: 96  GEAARLFQQNYLSLSQNGAAPAIYPYVYSAPSNTGVASGFDLNNDGVVGESGFELANDAF 155

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQS---------------YPLLGAKDSFSRAGNRRAVEL 148
                +    + +  K     Q++                P     D+ +   +   +E+
Sbjct: 156 GFGVFEGQYGMLLLSKYPIQEQRTRTFQNFLWRDMPNALLPDNPDTDAPADWFSAEELEV 215

Query: 149 L-----------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ-----WLK 192
           +           + I G++I  L  H     F    +   + +   +   A       + 
Sbjct: 216 VRLSSKSHWDAPINIRGRRIHALVSHPTPPVFDGPEDRNGTRNHDEIRFWADYISGCRIS 275

Query: 193 DWI------TQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTID-----------PNDSL 234
            +I               FVI GD N    +     +   + ++              S 
Sbjct: 276 RYIVDDEGRRGGLGDRESFVIMGDQNADPFDGDATQNPMTQLLEHPRVNVKHTPLSAGSA 335

Query: 235 IRFPKEKDSRC---------NANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNED 283
               ++ ++             + N  N      DY +   +    +    F     +E 
Sbjct: 336 DAAFRQGEANALQIGNRAQDTGDFNDANPGNLRTDYVLPSSDLTI-IDSGVFWPSADDEL 394

Query: 284 DIKSRGKRL--SDHCPISIDY 302
                      SDH  + +D 
Sbjct: 395 YRLVGDGGAVSSDHRLVWVDI 415


>gi|294655388|ref|XP_457525.2| DEHA2B13332p [Debaryomyces hansenii CBS767]
 gi|199429918|emb|CAG85534.2| DEHA2B13332p [Debaryomyces hansenii]
          Length = 1043

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 81/310 (26%), Gaps = 53/310 (17%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------------- 74
           ++N+N L  +  +S W    K              N D   +  QE+             
Sbjct: 636 TFNVNGLCYEGDISEWLFPKKE---------NITTNYDVVFIGFQEVTELTAGKMVTTDS 686

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            + N   +           +  + ++       +        + K   V           
Sbjct: 687 SNRNFWERKIKSALEECNPNHNKYVSLWCGQIGSIAIFLFINQNKIENVSNVEGSFKKTG 746

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                A N+ AV +       +I ++  HL +        +    S       A+ +K  
Sbjct: 747 FGGMGA-NKGAVAVSFNYANSEICLVASHLAAGLSNTDERHQNYKSI------AKGIKFS 799

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIRFP 238
             ++       +  GDFN ++                      D   K +   +S   F 
Sbjct: 800 KNRRIRDHDAVIWLGDFNYRVGLTNEQVRPLIEKKEFSKLFEYDQLNKQMASGESFPFFD 859

Query: 239 KEKDSRCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           + + +     K        D                ++  S ++I+       S     S
Sbjct: 860 EMEITFPPTYKFDNGTKNYDTSEKQRI---PAWTDRILSLSRNKIIKQLSYDSSPDLIFS 916

Query: 294 DHCPISIDYD 303
           DH P+   + 
Sbjct: 917 DHRPVHATFT 926


>gi|154486610|ref|ZP_02028017.1| hypothetical protein BIFADO_00427 [Bifidobacterium adolescentis
           L2-32]
 gi|154084473|gb|EDN83518.1| hypothetical protein BIFADO_00427 [Bifidobacterium adolescentis
           L2-32]
          Length = 365

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/286 (9%), Positives = 72/286 (25%), Gaps = 57/286 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+   + R+++ N                     ++   +    K  D  ++ LQE+   
Sbjct: 135 AAKHGRFRVMTLNCRY----------------GRANAAAIVSAVKEHDVAVLALQELTD- 177

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                V   +   +            +D++N     I +R         + P+     + 
Sbjct: 178 ---DLVAALDEAGLSDLLPYRQLGENKDTDNGGFNGIWIR----IEPSDTSPITAVIPAA 230

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              G    ++ +     + I  +  H KS        +                   +  
Sbjct: 231 DVPGVCFPIDAM-----RGITFVSAHPKSPMRGCRDWSAGIIGLGE-----------LAT 274

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            ++     V+ GD N   ++                     +        +     ++ +
Sbjct: 275 SQKQGDITVVLGDLNSGTDHPSFRKLLDAGFQDAALTEAKGRRA---TFPSWLPWPRLIL 331

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+ +                      D++S     +DH  ++    
Sbjct: 332 DHILFTAGLTAS--------------DVRSFTVNGTDHLALAATLT 363


>gi|221106410|ref|XP_002168525.1| PREDICTED: similar to mKIAA0910 protein [Hydra magnipapillata]
          Length = 1557

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/343 (12%), Positives = 83/343 (24%), Gaps = 69/343 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ---------YAKNLDADIVFLQEM 74
           V + +WN+N       ++    S+     DY  L +         + K  D   +  +E+
Sbjct: 464 VTVSTWNVNGGKHFRSIAYKHQSMHDWLLDYYKLAKEGILDNTETFEKVTDVYAIGFEEL 523

Query: 75  GSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVRVLQQ 126
              N    +      K  W          NH     + +    +     VR ++V  ++ 
Sbjct: 524 VDLNTGNIISTSSSQKKEWGAKLQEVISRNHPYVLISAEQLVGVCLFVFVRLQHVPYIRD 583

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
               +        AGN+ AV + +  +   +  +  H  +        N      S    
Sbjct: 584 VAVSVVKTGLKGNAGNKGAVAVRMLFHSTSLCFVCGHFAAGQSNALERNNNYHDISRR-- 641

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDP 230
               L   +             GDFN +IN                   +ND        
Sbjct: 642 ----LAFPMGTSLAFHDYVFWCGDFNYRINLPYNEVKELLKDKDWPTLLSNDQLLMHKAD 697

Query: 231 NDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMD--------------- 263
                 + +   +     K                    D  +                 
Sbjct: 698 GKVFGDYIEGTINFPPTYKYDLFSNDYDTSEKMRTPAWTDRVLWRRKKYDVESEDESDED 757

Query: 264 ---QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +        + +    N         + SDH P+    D
Sbjct: 758 DIPPDWKVSKDDSTDTFNPGNIVYYGRAELKTSDHRPVIAVID 800


>gi|170580512|ref|XP_001895294.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
 gi|158597804|gb|EDP35843.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
          Length = 616

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 70/215 (32%), Gaps = 30/215 (13%)

Query: 21  AQKVRLVSWNI---NTLSEQEGVSLWKNSVKR-----TTSDYTLLRQYAKNLDADIVFLQ 72
              +R+ S+N+    T  +   + +      R       + + LL +    + ADI  LQ
Sbjct: 254 GNPLRICSYNVLCQQTAYKTPELYIHLAKPGRAYELTWENRWRLLTREFSMIAADIFCLQ 313

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+         +       F +   L  + KR  +     AI  +     +  Q      
Sbjct: 314 EVQ-----YDHYDYFFKPYFEAAGLLGKYKKRTHSLIDGCAIFYKSHFQLLNYQHIEYYV 368

Query: 133 AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
           + DS     N   + + ++   +G++  + + HL                  +   Q   
Sbjct: 369 SSDSVLDRDNIGQL-VRLKDMRSGREFCIANTHLLF----------NKRRGDVKLAQLAV 417

Query: 191 LKDWITQKKESLV----PFVIAGDFNRKINYLGNN 221
           L   I ++         P+++ GDFN +      N
Sbjct: 418 LLANIDKECGPESGQECPYIVCGDFNIQPYSPLYN 452


>gi|310818603|ref|YP_003950961.1| hypothetical protein STAUR_1330 [Stigmatella aurantiaca DW4/3-1]
 gi|309391675|gb|ADO69134.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 245

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 64/241 (26%), Gaps = 50/241 (20%)

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           AD++  QE+ +    +K+     +  F               +  ++     +KN     
Sbjct: 53  ADVIGWQEVDTDAGHSKLGALEYYDHF--------RPGEGRLDARNSIAISWRKNKYEKT 104

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                L          +R    ++++    G K+  ++ H  S  +            + 
Sbjct: 105 GDGSRLTHGGEAGVTPSRFVNWVVLKNKDTGAKLAFINTHYISGAWNGEHPERQERWQTH 164

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
                  +++ +       +P V+ GDFNR ++                         D 
Sbjct: 165 N----AVVREVVADLLSRGLPVVLVGDFNRPLSQDIP-----------GMNHLRTAGVDG 209

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +PID   + +                     +   K  SDH   +    
Sbjct: 210 -----------VPIDQIYVSRGIG--------------TGPAERLEKYGSDHFAYTATVQ 244

Query: 304 F 304
           +
Sbjct: 245 Y 245


>gi|301100390|ref|XP_002899285.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262104202|gb|EEY62254.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 408

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/337 (9%), Positives = 80/337 (23%), Gaps = 61/337 (18%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
              ++ +N+     +         ++R       + +       D+V   E         
Sbjct: 2   TFEVLQYNLFGRPYEVSKDGQSERLQRVPESLHRISEAI-----DVVTFAEADIRTQRDA 56

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  +     F  +  +++     ++      + V  K   + +  +    A         
Sbjct: 57  MLDQFRVFGFNYSTTILHDPDPFTSLLNG-GVMVVSKWPIIREAQHVYRNACHYSDCLAA 115

Query: 143 RRAVEL----LVEINGKKIWVLDIHLKSFCFLDSLENTYSP----------SCSLLSQQA 188
           +          V+   K   V   H++   F+D+++  +                   + 
Sbjct: 116 KGVKYARLLKTVDGASKIFNVFATHMQMRRFIDAIDIPHHEPLIFAGDFNVDNHTFGDEV 175

Query: 189 QWLKDWITQKKE----------SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
             L + +   +                V+ G     I+   +         P D +    
Sbjct: 176 AHLVELLGAHEPRQIGKQYFTSDPHTNVLVGRDGAAISNKCSAQYVTNWGPPKDGVFHPS 235

Query: 239 KEKDSRCNA-------------------NKNLRNKIPIDYFVMD------QNAYKFLIQE 273
               + C                              +DY +         +    L   
Sbjct: 236 LLTRTTCGMHSEINESTWLLFLEPDTMCYCPCCPLEWLDYVLYGKAPYQQPSTVPTLEAH 295

Query: 274 SFSEILYNEDDIKSRGKR------LSDHCPISIDYDF 304
                 +  D    +         LSDH P+   ++F
Sbjct: 296 VNQVTHFTVDWTAPQSNMKMALVDLSDHYPVHAKFEF 332


>gi|121603084|ref|YP_980413.1| exodeoxyribonuclease III Xth [Polaromonas naphthalenivorans CJ2]
 gi|120592053|gb|ABM35492.1| exodeoxyribonuclease III Xth [Polaromonas naphthalenivorans CJ2]
          Length = 319

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/326 (10%), Positives = 80/326 (24%), Gaps = 106/326 (32%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L+++      D + +QE+ +  A             +          + +    ++ + +
Sbjct: 20  LQEWVAQSMPDCICVQELKAQAA--------DLSGRFEAIAGHKGYFQFAEKKGYSGVGI 71

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK----KIWVLDIHLKSFCFLDS 172
             ++         ++G   +   A  R  VEL  +  G+    K+ ++  +  S    + 
Sbjct: 72  YTRHEPSDV----IVGYGSTEFDAEGRY-VELRFDRPGRRHSPKLSIISCYFPSGSSGEE 126

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA----------------GDFNRKIN 216
            +       + L      L     +       FV+                 G+      
Sbjct: 127 RQAAKFRFLAELYPHLAAL----KRCGGDNREFVLCGDINIAHQEIDLKNFKGNKKNSGF 182

Query: 217 YLGNNDDFWKTIDP---------------------------------------------- 230
                    + + P                                              
Sbjct: 183 LPEERAWMTELLAPTLPTACGSLPPEGAAAPAARQSRLRGPGLQEASAAVDAAPALDSSA 242

Query: 231 --NDSLIRFPKEKDSRCN-ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEI 278
                +  + +   +  + A     N+           +DY +            S    
Sbjct: 243 QGGGMVDVYRRLHPATTDEAYTWWSNRGQAYAKNVGWRLDYHLATPGFGATAHSASIH-- 300

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304
                    + +R SDH P++I+YD+
Sbjct: 301 ---------KAQRFSDHAPLTIEYDW 317


>gi|332535471|ref|ZP_08411254.1| hypothetical protein PH505_cu00140 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035116|gb|EGI71630.1| hypothetical protein PH505_cu00140 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 248

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 64/240 (26%), Gaps = 41/240 (17%)

Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPL----------------LGAKDSFSRAGNRRAVE 147
                  H  +A+  K      +   L                    +++  A   +A+ 
Sbjct: 6   GFGFFKGHYGMAILSKYPINFDKVRTLQTFKYKDMPNAQMPVMPQTGENWYNAQEWQALR 65

Query: 148 LL--------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           L         + +N K I V+  H     F    +     +   +   A ++ +      
Sbjct: 66  LSSKSFWDLPISVNDKTIHVIASHPTPPVFDGEEDRNGKRNHDEVRLIADYVSNAKYIYD 125

Query: 200 ESLV--------PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--------KEKDS 243
           +            FVI GD N          +    +  N  +            ++ D 
Sbjct: 126 DKGEKGGLKAHSRFVILGDLNAAPEGDKARTNTTDQLLKNPLINASFVPKSEGAKEQYDV 185

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS-DHCPISIDY 302
               N +   +  +DY +      K      F     + +    + +  S DH  + +D 
Sbjct: 186 PYAQNYSANWQARVDYVLPSNYGLKIKDGGVFWPTKTSSEYRLIKDRNASSDHRMVWLDL 245


>gi|294666932|ref|ZP_06732162.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603304|gb|EFF46725.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 419

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/380 (9%), Positives = 86/380 (22%), Gaps = 103/380 (27%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             A ++R+ ++N +  S++ G  + +       +    +    + +  D+V L E   ++
Sbjct: 45  PAAAQLRIATYNTSLYSDEAGGLIRELQGDSAHAR--KIAAVLQRVRPDLVLLNEF-DFD 101

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNND----------------------------- 109
              +             +     + R                                  
Sbjct: 102 PEHRAADLFQQRYLQVAQPGGGEALRYPYRYLAPVNTGVPSGLDLDNNGSAGGEGRARGN 161

Query: 110 ---------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR------------AVEL 148
                        + V  +     Q        K S      R             A+  
Sbjct: 162 DAWGYGLHPGQYGMLVLSRYPIDAQAVRSFQLLKWSALPGALRPIDPASKTSYYSDAIWA 221

Query: 149 LVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            + ++ K             +  L  H     F  + +   + +   L     +L +   
Sbjct: 222 QLRLSSKSHWDVPVRTPVGVVHALVSHPTPPVFDCAEKRNAARNHDELQLWRAYLDNAPD 281

Query: 197 QK------------KESLVPFVIAGDFNRKINYLGNNDDFWKTI-------------DPN 231
            +              +   FVI GD N          +  + +                
Sbjct: 282 SQRWLCDDKGGCGGLAADARFVILGDLNNDPVDGAGRHEAIRALIHHPRVLQYPTPHSDG 341

Query: 232 DSLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                         ++    +           + +DY +  +     +    F       
Sbjct: 342 GPEKTAEYAALGIAHSGDPHQVTGDFGPQAGTMRLDYVLPSRQFT-LIGSGIFWPASNAP 400

Query: 283 DDIKSRGKRLSDHCPISIDY 302
           +   + G   SDH  + ID 
Sbjct: 401 EAAIADG---SDHHAVWIDL 417


>gi|147827067|emb|CAN66461.1| hypothetical protein VITISV_035843 [Vitis vinifera]
          Length = 734

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 36/109 (33%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  +     +           F + +D    +    +  +   N   N +
Sbjct: 607 DDPWCLGGDFNITLFQREMSNQRRISSTMRRFVEIVDDLGLVDLPLQGGEFTWNGGLNNQ 666

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F++  +              ++        + +SDH PI ++
Sbjct: 667 AWARLDRFLVSPS----------WLDQFSGVTQSRLSRPISDHFPIVLE 705



 Score = 36.1 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 35/224 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++++SWN+   +E               S   +++ Y ++   D++ +QE         
Sbjct: 513 KLKILSWNVRGANES--------------SKRKIIKNYVRDQRVDLICIQETKIQAMSEG 558

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV----RVLQQSYPLLGAKDSFS 138
           +        F     L             T +A                 P     D   
Sbjct: 559 IVRSLGTGRFIDWRALNAEGATGGVYGPFTKVAKEGMWEEFGAIRGLWDDPWCLGGDFNI 618

Query: 139 RAGNRRA-------------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
               R               VE++ ++    + +          L++          +  
Sbjct: 619 TLFQREMSNQRRISSTMRRFVEIVDDLGLVDLPLQGGEFTWNGGLNNQAWARLDRFLVSP 678

Query: 186 QQAQWL----KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225
                     +  +++      P V+ G   R+       ++ W
Sbjct: 679 SWLDQFSGVTQSRLSRPISDHFPIVLEGGGIRRGPTPFRFENMW 722


>gi|302883300|ref|XP_003040551.1| hypothetical protein NECHADRAFT_88425 [Nectria haematococca mpVI
           77-13-4]
 gi|256721437|gb|EEU34838.1| hypothetical protein NECHADRAFT_88425 [Nectria haematococca mpVI
           77-13-4]
          Length = 399

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/328 (10%), Positives = 77/328 (23%), Gaps = 67/328 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQEMGSYNAV 80
             +++ SWN+            +    R T+    LR        + +V  QE+   +  
Sbjct: 89  DSLKIASWNL--------FFTSRGPATRATAALDHLRTLFGQEPHNLVVMFQEVCQESLH 140

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A +  + T   F  T                     R++   V  ++   +  +      
Sbjct: 141 AILEDRWTQDNFSVTAVKPPP------------FYYREEWNDVRDENVGSMPTRHFTLMM 188

Query: 141 GNRR-----AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-----------L 184
             R         +      ++  ++     S        N     C+             
Sbjct: 189 IPRGLRISNCFRVPFVSESERDVLVVHLPVSENGPPDETNGILRLCTTHLESLDLGYGYR 248

Query: 185 SQQAQWLKDWITQKKESLVPF---VIAGDFNRKIN-YLGNNDDFWKTIDPNDSLIRFPKE 240
            +Q   L   +  +          ++ GD N  +     ++ +    +         P  
Sbjct: 249 FRQLAALSALLKSELVQGRKVYGGLVGGDMNSTLAPEHDDHRNPDIDLKDVWEDELAPTP 308

Query: 241 KD--------------SRCNANK-----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                                 +            +D F+       F ++E+       
Sbjct: 309 PALRPFYKDFTYGKDLGNTWGYQSKGRLYQDYGSRLDKFLYTGPIETFPVREAQDTAGRL 368

Query: 282 EDDIKS-------RGKRLSDHCPISIDY 302
                            +SDH  I++  
Sbjct: 369 GRFGLGLKTRVGLNDVWVSDHFGITVGI 396


>gi|225704640|gb|ACO08166.1| Deoxyribonuclease gamma precursor [Osmerus mordax]
          Length = 237

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 71/250 (28%), Gaps = 33/250 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +     AL    +   +S    +++ S+NI +  E              T    ++    
Sbjct: 1   MAGIWFALALLSIGEVSS----LKICSFNIQSFGE---------RKMERTEVVDVILDII 47

Query: 62  KNLDADIVFLQEMGS------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
                DI+ + E+           + ++  +           +     R S  + + A  
Sbjct: 48  ARC--DIMLIMEIKDASGTAFPQLMTRLNSRYRSRRAEYNYIISERLGRKSYKEQY-AFI 104

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
            R++ V V + SY     +     A +R    +       ++    I             
Sbjct: 105 YRQRLVSV-KSSYQYPDTQAGDMDAFSREPFVVWFSSPKTEVKDFVIIPIHTTPD----- 158

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               +   + +     +D   +       ++I GDFN    Y+   +     +  N S +
Sbjct: 159 ---AAVREIDELYDVFQDVDQRWTSEN--YLIIGDFNAACGYVPRREWANIRLRSNSSFL 213

Query: 236 RFPKEKDSRC 245
               +     
Sbjct: 214 WLTGDNIDTT 223


>gi|297695583|ref|XP_002825011.1| PREDICTED: protein angel homolog 1-like [Pongo abelii]
          Length = 670

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 58/203 (28%), Gaps = 6/203 (2%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +   +  +  L Q  ++ D DI+ LQE+   +
Sbjct: 244 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWSYRFVNLMQEFQHWDPDILCLQEVQEDH 303

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      F  T      +   ++         R + +      Y   G +    
Sbjct: 304 YWEQLEPSLRMMGF--TCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNR 361

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  +   +   G     +     +   +           + ++     +       
Sbjct: 362 DNVGLVLLLQPLIPEGLGQVSVAPLCVANTHILYNPRRGDVKLAQMAILLAEVDKVARLS 421

Query: 199 KESLVPFVIAGDFNRKINYLGNN 221
             S  P ++ GD N   +    N
Sbjct: 422 DGSHCPIILCGDLNSVPDSPLYN 444


>gi|157962060|ref|YP_001502094.1| endonuclease/exonuclease/phosphatase [Shewanella pealeana ATCC
           700345]
 gi|157847060|gb|ABV87559.1| Endonuclease/exonuclease/phosphatase [Shewanella pealeana ATCC
           700345]
          Length = 293

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 76/279 (27%), Gaps = 63/279 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            K+ + +WN+           +K   +        L +      +D++ LQE      + 
Sbjct: 61  GKLDVTTWNL-----------YKQKSEGWDETLKQLAE-----RSDLLLLQEAQLTPELN 104

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                    +  +           S  +    +    +        +       +F ++ 
Sbjct: 105 SFVESQELSMLLAK--------AFSFENEPVGVMNLTREPATSSCVFRKPEPYINFPKSM 156

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                 L    +  ++ V +IH  +F F                 Q + +++ I   +  
Sbjct: 157 LISYYAL---SDKSQLLVANIHSINFTFGLEEYKA----------QLRIVEEAIKGHQG- 202

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P + AGD N    +     D  + +     L       DSR     +      +D+  
Sbjct: 203 --PVIFAGDMN---TWSDERFDTVRQLAKRADLTEAIPSVDSRTRVLGHN-----LDHIF 252

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 + +  ES                  SDH P+  
Sbjct: 253 YRG--LELIKAESIITST-------------SDHNPVKA 276


>gi|296231418|ref|XP_002761142.1| PREDICTED: sphingomyelin phosphodiesterase 3 isoform 2 [Callithrix
           jacchus]
          Length = 655

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 82/301 (27%), Gaps = 73/301 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKDQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNN--------- 221
           +   Q   L+DW+   ++S                V+ GDFN       +          
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFT 530

Query: 222 -----------------------------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                                              D+  K ++  +    +     S+ +
Sbjct: 531 HYRDPCRLGPGEEKPWAIGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSS 590

Query: 247 ANKNL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             K        N   IDY +  +       +    E  +           L+DH P+++ 
Sbjct: 591 GQKGRKELLKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVAMR 645

Query: 302 Y 302
            
Sbjct: 646 L 646


>gi|119503203|ref|ZP_01625287.1| hypothetical protein MGP2080_11083 [marine gamma proteobacterium
           HTCC2080]
 gi|119460849|gb|EAW41940.1| hypothetical protein MGP2080_11083 [marine gamma proteobacterium
           HTCC2080]
          Length = 260

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 82/280 (29%), Gaps = 65/280 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           LVSWNI            K +      D        +    D++ LQE    +   +   
Sbjct: 44  LVSWNIE-----------KGNNPEWLEDLQT-----QQTSPDLMLLQEAYIPSPFKRFVG 87

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
             T   F         S+      + T +         L  +        +  +A     
Sbjct: 88  PLTHENF---------SEGYLAGRLQTGVLSVSSVKPQLHCALTAYEPWLTTPKATT--I 136

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
               +  + + + V++ H+ +F +                 Q Q ++  + Q      P 
Sbjct: 137 TRYGLTGSEQPLLVINAHMVNFEWGVEGFIQ----------QWQEIEQVLKQH---NGPL 183

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPIDYFVMDQ 264
           ++AGDFN             + +   +++ R           + +     +P+D+ ++  
Sbjct: 184 IVAGDFNT---------WNVERVGVLETVKRRHNLTSVAFYPDLRTAFFGLPLDHVLLRN 234

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                L       ++  +          SDH  + ++  F
Sbjct: 235 -----LNATKAKVLVSTK----------SDHNSLWVELKF 259


>gi|328542936|ref|YP_004303045.1| endonuclease/exonuclease/phosphatase family protein [polymorphum
           gilvum SL003B-26A1]
 gi|326412682|gb|ADZ69745.1| Endonuclease/exonuclease/phosphatase family protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 377

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 50/369 (13%), Positives = 104/369 (28%), Gaps = 87/369 (23%)

Query: 22  QKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           Q  +   WNI    +   +         +R  +    +R+    LDADI+ + E  +  A
Sbjct: 2   QGFKFTCWNIEHADKLLDDLGRGDAAERRRAEARRDAIREEIAALDADILLVCEGPNGEA 61

Query: 80  VA----KVFPKNTWCIFYSTERLINHSKRDSN---NDIHTAIAVRKKNVRV--------- 123
            A     +   +   +   +    ++  + ++           +RK              
Sbjct: 62  RANRFFALVAPDHDLVVRGSGDRRDYGMQGTDASTGRQWIWFLIRKGRPITGELLHLDQW 121

Query: 124 ----------------LQQSYP-----LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162
                              SYP      L      + +  R    LL  ++G  + ++  
Sbjct: 122 RSLTEANSAGEHRGGSWDVSYPKFVGGQLQFDIDRNHSHWRHPQVLLARVDGVLVEIIGA 181

Query: 163 HLKS--------FCFLDSLENTYSPSCSLLSQQAQ--------WLKDWITQKKESLV--P 204
           HLKS            D+     +P+      +A+         ++ +I  + ++    P
Sbjct: 182 HLKSKLTQVRATGEPSDAAFFANNPALVADLIKARTKITTECSDIRHYIDARFKADASAP 241

Query: 205 FVIAGDFNRKINYLGNND---------------DFWKTIDPNDSLIRFPKEKDSRCNAN- 248
            ++AGD N                          F +    +        E+ S    + 
Sbjct: 242 IIVAGDLNDGPGKERIERRFLYHDLISSLQGEIFFARRFLNHALFDAPEDERWSVFFRDR 301

Query: 249 --KNLRNKIPIDYFVMDQNA-----------YKFLIQESFSEILYNEDDIKSRGKRL-SD 294
                  +I +D+ +  Q                         +++          L SD
Sbjct: 302 LDPGRDPRILLDHVLFSQAFTNNPQVEPFAFAARRRGGLVEHEVHHAVTGTRPKYALTSD 361

Query: 295 HCPISIDYD 303
           H P+S+ +D
Sbjct: 362 HKPVSMSFD 370


>gi|297283268|ref|XP_001084351.2| PREDICTED: deoxyribonuclease-1-like 2-like [Macaca mulatta]
          Length = 281

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 7/104 (6%)

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
               +  GDFN   +Y+   D     +  ++       +       N +       D  V
Sbjct: 178 TDDMLFLGDFNADCSYVRAQDWAAIRLRSSEVFKWLIPDSADTTVGNSDCAY----DRIV 233

Query: 262 M-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
                  + L  +S +   + E+    + + L  SDH P+ +  
Sbjct: 234 ACGARLRRSLKPQSATVHDFQEEFGLDQTQALAISDHFPVEVTL 277


>gi|288576120|ref|ZP_06394182.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996]
 gi|288566274|gb|EFC87834.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996]
          Length = 122

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 30/127 (23%), Gaps = 32/127 (25%)

Query: 201 SLVPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRC 245
                V+ GDFN         D                ++K +          +      
Sbjct: 3   RHEKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRQIHPEGA 62

Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                   +           ID+ ++       L            D      +R SDH 
Sbjct: 63  F-YTWFDYRGAMFQRKLGLRIDHQLISPALSAVLKDVYV-------DLDARAQERPSDHA 114

Query: 297 PISIDYD 303
           P+  ++D
Sbjct: 115 PVVAEFD 121


>gi|311276919|ref|XP_003135422.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1-like [Sus
           scrofa]
          Length = 954

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 72/309 (23%), Gaps = 47/309 (15%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  +  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 240 QTFKFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 284

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK     ++     
Sbjct: 285 TEAFFYFESVKEQEWSLAVERGLHSKAKYKKVQVVRLVGMMLLIFARKDQWPYIRDVAKE 344

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 345 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 404

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPNDSLIR 236
            + +           +  GD N ++     N+               F +          
Sbjct: 405 NQTFPQLNIMKHDVVIWLGDLNYRLCMPDANEVKSLINKNDLHRLLKFDQLNIQRTQKKA 464

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMD-----QNAYKFLIQESFSEILYNEDDIKSRGKR 291
           F    +         +     D +              ++    +              +
Sbjct: 465 FADFMEGDIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGINVNQL--HYRSHMELK 522

Query: 292 LSDHCPISI 300
            SDH P+S 
Sbjct: 523 TSDHKPVSA 531


>gi|323699161|ref|ZP_08111073.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. ND132]
 gi|323459093|gb|EGB14958.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio desulfuricans
           ND132]
          Length = 396

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/241 (9%), Positives = 60/241 (24%), Gaps = 15/241 (6%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GS 76
            S+   + L +WNI    +            R       L +       D++ +QE+   
Sbjct: 36  PSLHDTLVLGTWNIRNFDDNR-----FGHGPRIREAMYFLAETISAF--DVLAVQELCRD 88

Query: 77  YNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGA 133
              + ++       +    +     +   R+    I+    VR K V          L  
Sbjct: 89  LGPLRQLMRLLGPQYDYIVTDVAEQDGGNRERLGFIYNRAKVRFKGVAGEMVLPVRDLIE 148

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    R       +    +     +H+                  + +       +
Sbjct: 149 HGDAHLQPARSPFGCEFQAGWFRFLFTTVHIYFGKESQGSPEYARRVAEIDAVA----AN 204

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              + ++    +++ GDFN       + +   +                ++     +   
Sbjct: 205 IAARAEKEPCSYILVGDFNIDKMGDPSGNALIRNGFQAAQNNVGSNADRTKFYDQISWLP 264

Query: 254 K 254
           +
Sbjct: 265 R 265


>gi|261201242|ref|XP_002627021.1| endonuclease/Exonuclease/phosphatase [Ajellomyces dermatitidis
           SLH14081]
 gi|239592080|gb|EEQ74661.1| endonuclease/Exonuclease/phosphatase [Ajellomyces dermatitidis
           SLH14081]
          Length = 1194

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 98/315 (31%), Gaps = 41/315 (13%)

Query: 19  SVAQKVRL--VSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQY----AKNLDADIV 69
           + ++ +R+   ++N+N     +E   +SLW      +  +   +          L    +
Sbjct: 605 TSSKLIRVWAGTFNVNGRSNGAEGTDLSLWLLPQLNSLQEDPSILAVGFQEIVELSPQQI 664

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
              + G+         K+T   +  ++ +  +    S   + TA+ V  K+  + +    
Sbjct: 665 MSTDPGNRLIWENAV-KDTLNYYAHSKDVSEYVLLRSGQLVGTALLVFVKSELLTEIKVV 723

Query: 130 LLGAKDSF--SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQ 186
               K +     AGN+    + ++ +  +I  +  HL +     D     Y      L  
Sbjct: 724 EGSVKKTGMSGMAGNKGGCAIRLQYSNTRICFVTAHLAAGFSNYDERNRDYQTINQGLRF 783

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDP 230
           Q         +  E     +  GDFN +I   G                 +D     +  
Sbjct: 784 QR-------NRSIEDHDIIIWLGDFNYRIGLPGDTVRGLIKAGDLESLYEHDQLNLQMVA 836

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSR 288
             +   + + + +     K        D     + A    +  +  +        +  + 
Sbjct: 837 GLTFPFYSEARITFPPTYKYDNGTDRYD---TSEKARTPAWCDRILWKGKNIRPLEYDAA 893

Query: 289 GKRLSDHCPISIDYD 303
             + SDH P+   +D
Sbjct: 894 PLKFSDHRPVYATFD 908


>gi|168052767|ref|XP_001778811.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669817|gb|EDQ56397.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 372

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 71/243 (29%), Gaps = 25/243 (10%)

Query: 21  AQKVRLVSWNI---NTLSEQEGVSLWKNSV--KRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            ++  +VS+NI     +        W          +    L +       DI+  QE+ 
Sbjct: 8   PERFVIVSYNILADRNVWNHRSELYWHVPPFLLDWDARKRKLVRELGLWSPDIICFQEVD 67

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
            Y  + +             E +  ++ R        AI  RK    +L+  +      D
Sbjct: 68  YYEDLNE---------ELQKEYIGVYTARTGEAHDGCAIFWRKNRFELLEVEHIKFKDHD 118

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                     +++ +  + K   V+  ++         +     +  LL +     + W 
Sbjct: 119 LRDNVAQLCVLQV-LSCDSKNNRVIVGNIHVLFNPKRGDVKLGQARVLLEKAHAICEKW- 176

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSLIRFPKEKDSRCNANKNL 251
                   P  IAGDFN               +D       ++    ++++     N+  
Sbjct: 177 -----GNAPLAIAGDFNSTPWSALYEFITSSQLDLAFHDRRNISGQEEDQNDGFKRNEYN 231

Query: 252 RNK 254
             K
Sbjct: 232 PYK 234



 Score = 43.4 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 22/81 (27%)

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
                           E+      + + R K  +DY           + ++    +    
Sbjct: 273 LRSAYSEIKGKPGSRDERGEPFVTSYHKRFKGTVDYIWHTDELCTVRVLDTLPFSVLQRC 332

Query: 284 DIKSRGKRLSDHCPISIDYDF 304
                 K  SDH  ++ ++ F
Sbjct: 333 GGLPSKKWGSDHLALACEFSF 353


>gi|50289871|ref|XP_447367.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526677|emb|CAG60304.1| unnamed protein product [Candida glabrata]
          Length = 493

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 67/232 (28%), Gaps = 19/232 (8%)

Query: 23  KVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYN 78
           K++++S+N +     +  +        +      +L    K+ D D++ LQE+      +
Sbjct: 91  KIKIMSYNCLAQALIRRKLFPDSGEALKWYRRSRVLLNEFKHYDPDVLCLQEIDYIQYQS 150

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              + F K  +   +  +   NH            ++ R   +    +    +  + + +
Sbjct: 151 FWKEEFQKLGYSSQFHRKPSKNHGVCIIWKHEKFEMSDRM-LIDFDSEKSGDIEPRTTTN 209

Query: 139 RAGNRRAVELL---------VEINGKKIWVLDIHLKSFCFLDSLENTY----SPSCSLLS 185
            A    A++           +  +   I V   HL    F                    
Sbjct: 210 NAALILALKFTQKVKMMGKKLLDDKSGILVGTTHLFWHPFGTYERTRQCYVVLNKMKEFM 269

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
            +   L++          PF   GDFN +           K I  +      
Sbjct: 270 HRVNVLQNNNDGDMSHWYPFF-CGDFNSQPFDSPYLSMTCKPIKYDSRAKTV 320


>gi|259907945|ref|YP_002648301.1| Endonuclease/exonuclease/phosphatase [Erwinia pyrifoliae Ep1/96]
 gi|224963567|emb|CAX55057.1| Endonuclease/exonuclease/phosphatase [Erwinia pyrifoliae Ep1/96]
 gi|283477825|emb|CAY73741.1| hypothetical protein EPYR_01361 [Erwinia pyrifoliae DSM 12163]
          Length = 372

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 63/271 (23%), Gaps = 45/271 (16%)

Query: 32  NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI 91
              S+   + +  ++V         L    +    D++   E   +           +  
Sbjct: 91  RGYSDAPRLRVMVSNVLTPNRQAPRLLAQVQAEQPDVLIALETDRWWQSQLDVLSADYPY 150

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
                            D    + V  +      +   L+  +             L+  
Sbjct: 151 SLK-----------CPQDNLYGMHVYSRLPLKDAEIQYLVDDEIPSMH-------MLVQL 192

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
                + +  +H       +S E+T   +          L         +  P ++ GD 
Sbjct: 193 DEQTDVRLHCVHPMPPSPTESDESTDRDA---------ELVMVGKSVASAAQPVIVTGDL 243

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N               +  +  L                   + P+D+    Q+      
Sbjct: 244 NDVAWS----RTTQLFLKISGLLDPRRGRGMFCTFHAGYPFLRWPLDHVFHSQH------ 293

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   +    I+      SDH PI ID 
Sbjct: 294 --------FVLAGIRRLQNMGSDHFPILIDL 316


>gi|221042678|dbj|BAH13016.1| unnamed protein product [Homo sapiens]
          Length = 212

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 18/202 (8%)

Query: 27  VSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +  A+
Sbjct: 1   MSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGAE 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P      ++       +  R        AI  +     +L  +       D      +
Sbjct: 61  IRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISLLDRD 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + LL++       +      + C  ++          +   Q   L   I+      
Sbjct: 116 NVGLVLLLQPK-----IPYAACPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQK 170

Query: 203 V----PFVIAGDFNRKINYLGN 220
                P V+ GDFN        
Sbjct: 171 DGSFCPIVMCGDFNSVPGSPLY 192


>gi|297298315|ref|XP_002805205.1| PREDICTED: protein angel homolog 1-like [Macaca mulatta]
          Length = 659

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 311 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFMNLMQEFQHWDPDILCLQEVQEDH 370

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 371 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 430

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 431 VGLVLLLQPLVPEGLGQVSVAPLCVANTHILYNPRRGDVKLAQMAILLAEVDKVARLSD- 489

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 490 -----GSHCPIILCGDLNSVPDSPLYN 511


>gi|229091174|ref|ZP_04222397.1| hypothetical protein bcere0021_19920 [Bacillus cereus Rock3-42]
 gi|228692305|gb|EEL46041.1| hypothetical protein bcere0021_19920 [Bacillus cereus Rock3-42]
          Length = 213

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 64/200 (32%), Gaps = 28/200 (14%)

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +A   K   + +++      ++S        A+ +     G K  V ++HL        
Sbjct: 32  GLAFLSKIPIIAEEAIWETDIEESNYC-----AIRITFTYKGCKFGVTNVHLNW------ 80

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                  S  +  +Q   + +WI  +       ++ GDFN     + +     K      
Sbjct: 81  ------KSSRIRQEQMNTVNNWIENRASDYE--LLCGDFNDDPFSMVHQYLIRKHWIDVA 132

Query: 233 SLIRFPKE--KDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                 +        +  KN   K         D+ ++ +NA         +  ++ +  
Sbjct: 133 QFKEIEENMIAQPTLDYRKNPNLKDDVKQEKRYDWIMIQENAAFEF-PTIENVSIFGDSA 191

Query: 285 IKSRGKRLSDHCPISIDYDF 304
           + S G   S+H  + +D  F
Sbjct: 192 LTSTGMFPSEHYGVFVDLKF 211


>gi|145349836|ref|XP_001419333.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579564|gb|ABO97626.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 360

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/361 (11%), Positives = 87/361 (24%), Gaps = 85/361 (23%)

Query: 16  CTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-----I 68
            +   A+  R+V++N+    L+E    +    +  R     T LR+  + L+ +     +
Sbjct: 8   ASEDGARDARVVTYNVLSSHLAEPTYFTHCDANDLRAE---TRLRRVIEKLEPEVERRAV 64

Query: 69  VFLQEMGSYNA--VAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKN---- 120
           V LQE+    A  +   F K  +    S   +   N+              V+       
Sbjct: 65  VGLQEVSMTWAGPLHAYFAKRGYAFIVSLYGKPFNNYMGVGLAVPTDAYEVVKSDIARLS 124

Query: 121 -----------------------------VRVLQQSYPLLGAKDSFSRAGNRR--AVELL 149
                                        V + ++        D +  A  R    +   
Sbjct: 125 DTAKFPRAKKEEVNLGPLTPVYNLLVQTPVNLWRKLRDYRPPSDEWQTARGRFNSILYAT 184

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
           ++     +          C         + +   +      +       +   +P V+ G
Sbjct: 185 LKCKKTNVQFGVSTYHMPC------MFRTAADRRVMVIHAGIAAQYALNQSEGLPTVLMG 238

Query: 210 DFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRCNANK------------------ 249
           DFN K    G+       +D       I          N                     
Sbjct: 239 DFNLKPGDAGHTLITTGDLDESHEGYPIMPAGYTGEPFNVKPQKKMESAYVRVNGEEPNF 298

Query: 250 --------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                   +      +DY  +  +     + +                   SDH  ++  
Sbjct: 299 TNHARIKDDDPFIDTLDYIFVTDDVEVVDVLDLPHRDQVKGP--FPAATEPSDHIMLAAT 356

Query: 302 Y 302
            
Sbjct: 357 I 357


>gi|301757849|ref|XP_002914778.1| PREDICTED: protein angel homolog 1-like [Ailuropoda melanoleuca]
          Length = 675

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 249 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDH 308

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +   +           L    
Sbjct: 309 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCARPVEYFRPGLELLNRDN 368

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 369 VGLVLLLQPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSD- 427

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 428 -----GSHCPIILCGDLNSVPDSPLYN 449


>gi|281351455|gb|EFB27039.1| hypothetical protein PANDA_002696 [Ailuropoda melanoleuca]
          Length = 646

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 220 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDH 279

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +   +           L    
Sbjct: 280 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCARPVEYFRPGLELLNRDN 339

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 340 VGLVLLLQPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSD- 398

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 399 -----GSHCPIILCGDLNSVPDSPLYN 420


>gi|229821958|ref|YP_002883484.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
 gi|229567871|gb|ACQ81722.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
          Length = 276

 Score = 53.0 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 80/305 (26%), Gaps = 77/305 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +RLV+ N+       G +L  +++    +               ++ LQE+      + 
Sbjct: 13  PMRLVTLNLQHGLGTGGGALDADALAAAVAPLAGTH---------VLALQEVDRGQVRSG 63

Query: 83  VFPKNTWCIFYSTERLIN---------------HSKRDSNNDIHTAIAVRKKNVRVLQQS 127
              +            +                  +  + +     +A+      +   +
Sbjct: 64  GLDQAAVVAAALGLPHVRQAAALVGNVRAGVVRPDRAGAEHPESYGVALLSAFPVLASFA 123

Query: 128 YPLLGAKDSFSRA----------GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            PL G    + R             R A+  ++++ G  + +   HL +F          
Sbjct: 124 QPLPGGWVRWPRRRAGRWRVAIDEPRVALAAVLDVAGGPVSIATTHLSTFP--------- 174

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
               +  + Q + +   +        P ++ GD N +   +    D              
Sbjct: 175 ----ATATGQLRRVVRLVRGMPG---PRLVCGDLNLRTPSVRLATDL------------- 214

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                +R +   +      ID+ +                +               DH P
Sbjct: 215 --APLARGDTYPSWAPTREIDHVL-----------GEGWALPEGPGAPLPALDVA-DHRP 260

Query: 298 ISIDY 302
           +++  
Sbjct: 261 VAVTL 265


>gi|331233136|ref|XP_003329229.1| hypothetical protein PGTG_10281 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309308219|gb|EFP84810.1| hypothetical protein PGTG_10281 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 693

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 72/269 (26%), Gaps = 38/269 (14%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA----I 114
           Q    L    + + +    N   +V   +              S     +D        I
Sbjct: 6   QEIVKLSPQQIMITDPEKKNRWERVILTS-----LENRPNKKSSYAIIRSDQLVGAALII 60

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
             + + V  ++              AGN+ AV + ++I+      +  H  +        
Sbjct: 61  LAKTELVPAVRSVEAKTKKTGLKGIAGNKGAVAIRLDIHDSSFCFVTAHFAAGLSNVEE- 119

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
              +     +    ++L+    +   S    + AGDFN +I+    N+   + +   +  
Sbjct: 120 --RNHDYETIEDGLKFLRG---KTIASHENVIWAGDFNYRIDGGLQNNAVRQAVVDENYA 174

Query: 235 IR------------------FPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLIQES 274
                               + +   +     K        D     +      +  +  
Sbjct: 175 ELLAADQLLEHMAVQAVFPKYTEGAINFPPTYKYDVGTDRYD---TSEKMRIPAWTDRIL 231

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +     N  D      + SDH P+    +
Sbjct: 232 YQGSDLNLIDYSRAELKASDHRPVYATLE 260


>gi|288927477|ref|ZP_06421324.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288330311|gb|EFC68895.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 360

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 63/253 (24%), Gaps = 27/253 (10%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q +++   N       +  + +             L      +D DIV L E+ +   + 
Sbjct: 28  QDLKIFQLNT-WFGATQVNNAYNG-----------LVDVINQVDPDIVLLCELRNDLLLK 75

Query: 82  KVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           K+   +  +           H K     +  T + V  K      +  P           
Sbjct: 76  KIPDGDGEYTHRLCQSLKTKHQKNYYGKNHGTFVGVLSKYEIKSFKVLPTPTDNYMIKVT 135

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------------YSPSCSLLSQQA 188
              R  E+              +L          +                  S   +  
Sbjct: 136 VEVRGQEMTFYSAHLDYKHYACYLPRGYNSGPDWSKLPNPITDSERIMKDNRLSTRDEAM 195

Query: 189 QWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           +   D    + +     V+ GDFN    +++  N  D +       +       + +   
Sbjct: 196 EMFLDDAQGEMDRGRIVVLGGDFNEPSDLDWQANTKDLYSHNGVVANWDCSVMLRKAGFV 255

Query: 247 ANKNLRNKIPIDY 259
                +   P+ +
Sbjct: 256 DTYREKFPNPVTH 268


>gi|115947205|ref|XP_797066.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115961731|ref|XP_001190128.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 1060

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 74/311 (23%), Gaps = 63/311 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           + +WN+N     E +  W  +  +    Y              +  QE+           
Sbjct: 404 VGTWNVNGKGATEDLRNWLAADPKPPDMYA-------------IGFQELDLSKEAFLFND 450

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDSFS 138
              +  W          +                 + +++++   + +            
Sbjct: 451 SIREEEWHKRVIMCLHQDGVYIKLKLIRLVGMMLLVFIQERHYPYIDEVIAGTVGTGIMG 510

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           + GN+ AV +    +      ++ HL +        N          +  +     +   
Sbjct: 511 KMGNKGAVAVRFNFHNTSFCFINSHLAAHMEEYERRNQDYHDICARMKFEREHHQPLGVM 570

Query: 199 KESLVPFVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSLIRFPKEK 241
           +      +  GD N +IN L                    D   +  + +     F +  
Sbjct: 571 Q--HDVVIWMGDLNYRINDLAVDTVKTLIYNNSFKELLMQDQLNRQRELSRVFKGFDEAP 628

Query: 242 DSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                  K                    D  +         +  S  ++           
Sbjct: 629 IGFLPTYKYNSGSDEWDSSEKQRVPAWCDRILHRGACIVPKVYRSHMKL----------- 677

Query: 290 KRLSDHCPISI 300
            RLSDH P+S 
Sbjct: 678 -RLSDHKPVSA 687


>gi|307579157|gb|ADN63126.1| exodeoxyribonuclease III Xth [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 237

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/269 (10%), Positives = 75/269 (27%), Gaps = 68/269 (25%)

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ +QE+       ++   + +   Y         +  +    ++ +A+  +      ++
Sbjct: 1   MLCVQEI--KAQRHQLVGPDFFPAGYHVCF-----RDATIKKGYSGVAIYSRCEPDELRT 53

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                  D   R          VE     + V+  ++ S    +  ++            
Sbjct: 54  TLGWAEFDEEGRY---------VEARFGNLSVVSFYIPSGSSGEKRQHYKFEV------- 97

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID------------------ 229
            +WL+  + +   S   +V+ GD+N   + L   +      +                  
Sbjct: 98  MRWLRPILCEWLLSGRDYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDWLNGLCADS 157

Query: 230 -------PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQE 273
                       +   +    +        N+           IDY  +     + + + 
Sbjct: 158 LHDVNSAQGRGWVDTYRVLHPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPGLRERVSRC 217

Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +               +R SDH P +++Y
Sbjct: 218 AI-----------YCEQRFSDHAPYTVEY 235


>gi|300772810|ref|ZP_07082680.1| hypothetical protein HMPREF0766_13012 [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300761113|gb|EFK57939.1| hypothetical protein HMPREF0766_13012 [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 289

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 73/247 (29%), Gaps = 40/247 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             + +  + ++++S N+                  T  D+  +  Y K  + D++FL+++
Sbjct: 45  SGSNAPTKTLKVMSVNMR---------------LSTIPDFATMITYIKEYNPDLLFLRQI 89

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S     +   +    +  S    +   K           AV  K     + +  L   +
Sbjct: 90  DSATTRVEKVNRP-QVMADSLGMEVFFKKNFDYQTGGFGNAVLSKFPIKEKVAQILR--R 146

Query: 135 DSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           +  + A  R AV + VE+  G  ++     L      +             + Q   L  
Sbjct: 147 EDGNTAELRSAVMIRVEVEKGHDVYFAGTELDPSVVNN------------RNLQVIDL-- 192

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            +   ++   P ++ G+FN             + +        F          +     
Sbjct: 193 -LNMTEKITEPVILVGNFN------EQESANGQVLSYLKGSFTFACLGAGCPMNSPKASP 245

Query: 254 KIPIDYF 260
               DY 
Sbjct: 246 TGIYDYI 252


>gi|84498248|ref|ZP_00997045.1| hypothetical protein JNB_19213 [Janibacter sp. HTCC2649]
 gi|84381748|gb|EAP97631.1| hypothetical protein JNB_19213 [Janibacter sp. HTCC2649]
          Length = 283

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/276 (10%), Positives = 71/276 (25%), Gaps = 37/276 (13%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEM 74
             A+    +++V  N                   T        +     D+ D++  +E+
Sbjct: 24  TAAAAGNTIKVVQHN-------------------TDQIEARWTRVLGKGDSNDLLLAEEV 64

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                         W   +  ++        +           +                
Sbjct: 65  CQKWVEDARVAHPGWKFSFHRQKRTTTDNALNVCPASADGSTWKGPAAVYTGSGASTTQD 124

Query: 134 KDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           K      G R  +  +    +G+K+     HL+           +    +  ++Q   +K
Sbjct: 125 KLLDKSDGQRFGMACVTFTHSGRKVHGCATHLQ---------VYHDKDLADRTRQTAAIK 175

Query: 193 DWITQKKES-LVPFVIAGDFNRKINYLGNNDDFW-----KTIDPNDSLIRFPKEKDSRCN 246
              T   +      ++ GDFN   +       +      + ++ +  +            
Sbjct: 176 RITTPWIQEKGHAVIVGGDFNMTPSRSPMKSMYQPGGTGRFVEAHQLMTGSGARTGDPTI 235

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
            +K+ + +  IDY     N        + +    N+
Sbjct: 236 FDKDGKGQRKIDYVFFSSNRTPLGSGGNLAVTPIND 271


>gi|147820649|emb|CAN72097.1| hypothetical protein VITISV_042083 [Vitis vinifera]
          Length = 1832

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/287 (11%), Positives = 77/287 (26%), Gaps = 90/287 (31%)

Query: 23   KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            KV+++SWN+   ++               S   +++ + +N   D++ +QE         
Sbjct: 907  KVKILSWNVRGANDS--------------SKRKVIKTFIRNQRVDLMCIQETK------- 945

Query: 83   VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                         + + +   R   +                            +     
Sbjct: 946  ------------VQCMTDSIARSIGSGRFLG-----------------------WKAVNA 970

Query: 143  RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              A      +    + V       F                L ++   ++          
Sbjct: 971  EGAFRRFRNVEDGNVXVFTGVYDPFS---------KVEXDALWEEFGAIRGLWE------ 1015

Query: 203  VPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
             P+ I GDFN  +     +          +F + +D    +    +  D   N   N + 
Sbjct: 1016 DPWCIGGDFNITLFSRERSGQRRISSAMRNFAEIVDDLGLVDLPLQGGDFTWNGGLNNQT 1075

Query: 254  KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +D F++  +              ++  +     + +SDH PI +
Sbjct: 1076 WARLDRFLVSPS----------WIDQFSGINQCRLPRPVSDHFPIML 1112


>gi|297189953|ref|ZP_06907351.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297150325|gb|EDY62516.2| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 344

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/251 (10%), Positives = 54/251 (21%), Gaps = 49/251 (19%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           D     +    +  D+V L+E+     +A           ++                  
Sbjct: 142 DPAGTARTLLRVRPDLVALEEVTPAALLAYENELARHLPHHAVV-------------GTV 188

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +        V        G    ++R     A+          + V   HL S      
Sbjct: 189 GLWSAHPLEDVRPVDIKPRGFGPGWNR-----ALRATAVTPQGPVAVHVAHLPSVRLGLR 243

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
              + +                     E     ++ GD N  ++  G +    +     +
Sbjct: 244 HGFSSAWRDESAR------LLGAALAAEKEARVILLGDLNSTVDDRGLDPVLAQVGVAGE 297

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                         +         ID  +    A   +     +                
Sbjct: 298 GF----------AFSWPASFPVARIDQIMARSAAVTRVRSLPAT---------------G 332

Query: 293 SDHCPISIDYD 303
           SDH PI+    
Sbjct: 333 SDHLPITATIT 343


>gi|156086224|ref|XP_001610521.1| endonuclease/exonuclease/phosphatase [Babesia bovis T2Bo]
 gi|154797774|gb|EDO06953.1| endonuclease/exonuclease/phosphatase, putative [Babesia bovis]
          Length = 753

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 71/216 (32%), Gaps = 19/216 (8%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
               + Q   ++++N   L  +        +   T      +    +  +AD+V  QE+ 
Sbjct: 167 AAPDLTQSFSMLTFNAGLLEVRMLGLQMYQNPGYTDKRLKCVPSEIRKANADVVAFQEVY 226

Query: 76  SYN----AVAKVFPKNTWCI----------FYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           S +     + ++     + +          F         +++      H+ +    K  
Sbjct: 227 SNHHAHYIIKELKDLYPYSVRDGCAPVSDDFEHLYERNKKTRKRGIAMFHSGLLFLSKFP 286

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPS 180
            +  + +P        +   N+  +E+ V+I    KI   ++H+ S        +     
Sbjct: 287 ILCAKFHPWDVVTHLEALLANKGYLEIFVDIPAAGKIAFYNVHMASASVNPESTHV---- 342

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
            ++ +++ + L     +        ++ GD N   N
Sbjct: 343 ETVRNEEIKQLLKTTERAASLGFAPIVIGDLNAAPN 378


>gi|7670468|dbj|BAA95085.1| unnamed protein product [Mus musculus]
 gi|148681069|gb|EDL13016.1| angel homolog 2 (Drosophila), isoform CRA_b [Mus musculus]
          Length = 212

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 18/202 (8%)

Query: 27  VSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +   +
Sbjct: 1   MSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTE 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P      ++   ++              AI  +     +L  +      +D      +
Sbjct: 61  IRPSLESLGYHCEYKMKT-----GRKPDGCAICFKHSRFSLLSVNPVEFCRRDIPLLDRD 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + LL++       +      S C  ++          +   Q   L   I       
Sbjct: 116 NIGLVLLLQPK-----IPRAASPSICIANTHLLYNPRRGDIKLTQLAMLLAEIANVTHRK 170

Query: 203 V----PFVIAGDFNRKINYLGN 220
                P V+ GDFN        
Sbjct: 171 DGSSCPIVMCGDFNSVPGSPLY 192


>gi|319442911|ref|ZP_07992067.1| putative exodeoxyribonuclease [Corynebacterium variabile DSM 44702]
          Length = 327

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/339 (11%), Positives = 83/339 (24%), Gaps = 74/339 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYN 78
            + + + N+N +           + +R   +   +  +     ADIV LQE+        
Sbjct: 5   SLTVATVNVNGIRA--------AAKQRNELN-HGILPWLDATPADIVLLQEVRATPEQTE 55

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDS-------------------NNDIHTAIAVRKK 119
           A       + W +  +       +                                +  K
Sbjct: 56  ATLAPALASGWHLAQAEAAAKGRAGVAVLSRARIDDVQVGFDELPGAEEFGDAGRWIEAK 115

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNR-------RAVELLVEINGKKIWVLDIHL-KSFCFLD 171
              +   S  L    ++ ++   +                +G+++ V             
Sbjct: 116 TAGITVASVYLPSGAENTAKQDEKYRFLDVLGPYLANRAASGEEMVVGGDWNICHRRADL 175

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID-- 229
                       L  +  ++   +    ++      A D  R  N  G   DF+  +D  
Sbjct: 176 KNWRPNRKKSGFLPDERAFMDSLLGTFPDASTQVGDATDAGRNGNPAGGVGDFFGAVDYT 235

Query: 230 ----------------PNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQ 264
                           P    +      D           +           IDY +  +
Sbjct: 236 PGRVAQARVAGGAPGDPQWFDVLRQLHADEEEGPYSWWTWRGKAFDTGAGWRIDYQIASR 295

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ++  +           D       R SDH P+ ++Y+
Sbjct: 296 PLFERAVAAWV-------DKAPDYDLRWSDHSPVLVEYN 327


>gi|316997283|dbj|BAJ52736.1| cytolethal distending toxin B [Campylobacter lari]
 gi|316997293|dbj|BAJ52745.1| cytolethal distending toxin B [Campylobacter lari]
          Length = 268

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 85/306 (27%), Gaps = 52/306 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +L+ +F +    +++     + +WN+   S         +           +RQ  
Sbjct: 1   MKKIILSFIFSVSLAFSAL-DDYNVGTWNLQGSSASTESKWNIS-----------IRQLV 48

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              +  D++ +QE G   + A + P+                   S +  ++      + 
Sbjct: 49  TGDNPLDVLAVQEAGVLPSTAMMTPRQVQPPGVGIPIHEYEWNLGSLSRPNSVFIYYSRV 108

Query: 121 VR--------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
                     ++ +               +R  + + +  +        IH  +    D+
Sbjct: 109 DVGANRVNMAIVSRRQADEVIVLPPPTVASRPIIGIRIGND----VFFSIHALARGGNDA 164

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                +      +                 + ++I GDFNR  N           I   D
Sbjct: 165 GAIVTAVDMHFRNM--------------PQINWMIMGDFNRTPN---------NLIGLLD 201

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
             +R      S    +    +   IDY +   +    L                 R    
Sbjct: 202 PDLRSRVNIVSP--PSFTQTSGNIIDYAITGNSNQGALYTPPA--FAAVLALAGLRSFLA 257

Query: 293 SDHCPI 298
           SDH P+
Sbjct: 258 SDHFPV 263


>gi|270156813|ref|ZP_06185470.1| endonuclease/exonuclease/phosphatase family [Legionella longbeachae
           D-4968]
 gi|289164743|ref|YP_003454881.1| Endonuclease/Exonuclease/phosphatase family protein [Legionella
           longbeachae NSW150]
 gi|269988838|gb|EEZ95092.1| endonuclease/exonuclease/phosphatase family [Legionella longbeachae
           D-4968]
 gi|288857916|emb|CBJ11771.1| Endonuclease/Exonuclease/phosphatase family protein [Legionella
           longbeachae NSW150]
          Length = 273

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 75/301 (24%), Gaps = 43/301 (14%)

Query: 4   KYVLALVFFLVPCTASVAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           K V+++V   +   A     + R++  N+ + S  +                  +  Y  
Sbjct: 10  KIVISIVLSSILIVAKANSTLVRILQANLFSWSTMDKNKNPPP--------IIRMTSYIN 61

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
             + D +  QE  +   +     K       +  R       DS            +   
Sbjct: 62  EHNFDFIATQE--NDYLLTDRLYKLDQKYKIAGIREDASIFYDS-----------SRWAM 108

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           V      +    D   +   R AV    +       V               +      +
Sbjct: 109 VENSQKTIPMTPDGGGK---RVAVFSQFKNLKSGEIVALGTTHLCVAWGGHADCVGGQVT 165

Query: 183 LLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
             +  A+ + ++I      S +P  + GDFN   + L        T              
Sbjct: 166 AHNNDARTIGEFIEAYSVHSKIPTFVTGDFNNLQDNLNQAQIMESTFVNYGLAAVKSN-- 223

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                      N   ID+    Q   K            N    K      SDH  I + 
Sbjct: 224 --GTYIGPTFGN-AVIDFIYFCQATLK------------NASLYKQTQGNPSDHSAIDVT 268

Query: 302 Y 302
           +
Sbjct: 269 F 269


>gi|26353944|dbj|BAC40602.1| unnamed protein product [Mus musculus]
          Length = 212

 Score = 53.0 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 18/202 (8%)

Query: 27  VSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +   +
Sbjct: 1   MSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTE 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P      ++   ++              AI  +     +L  +      +D      +
Sbjct: 61  IRPSLESLGYHCEYKMKT-----GRKPDGCAICFKHSRFSLLSVNPVEFCRRDIPLLDRD 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + LL++       +      S C  ++          +   Q   L   I       
Sbjct: 116 NIGLVLLLQPK-----IPRAASPSICIANTHLLYNPRRGDIKLTQLAMLLAEIANVTHRK 170

Query: 203 V----PFVIAGDFNRKINYLGN 220
                P V+ GDFN        
Sbjct: 171 DGSSCPIVMCGDFNSVPGSPLY 192


>gi|238759151|ref|ZP_04620319.1| hypothetical protein yaldo0001_25150 [Yersinia aldovae ATCC 35236]
 gi|238702567|gb|EEP95116.1| hypothetical protein yaldo0001_25150 [Yersinia aldovae ATCC 35236]
          Length = 253

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 92/300 (30%), Gaps = 73/300 (24%)

Query: 9   LVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L+   +P  A +     +R++ WNI                K+  + +  + +     DA
Sbjct: 19  LLGQGLPPGAPLPTSEFLRVMVWNIF---------------KQQRAQWLSVLKEFGR-DA 62

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
            ++ LQE  +   + +                     + ++     A+      V  L  
Sbjct: 63  QLMLLQEAQTTPELVRFA---------------TSHYQAADQVPAFALPQHPSGVMTLAA 107

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           ++P+            R +   LV +    +G+ + V++IH  +F     + +       
Sbjct: 108 AHPVYCCPLREREPLLRLSKSALVTVYPIHDGRLLMVVNIHAVNFSLGVDVYS------- 160

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
                 + L+    Q      P ++AGDFN         +   +    +       +   
Sbjct: 161 ------KQLEPIGEQIALHRGPVILAGDFNAW--SRQRVNALQRFAQGSGLEEVAFRAD- 211

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                N++     P+D+                     +  D      R SDH P+ +++
Sbjct: 212 -----NRSRAFGRPLDFVFYRG---------------LSVADASVLVTRASDHNPLLVEF 251


>gi|218514267|ref|ZP_03511107.1| putative phosphatase protein [Rhizobium etli 8C-3]
          Length = 272

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 46/178 (25%), Gaps = 29/178 (16%)

Query: 67  DIVFLQEM----------GSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHT 112
           D++ LQE+               +A +FP   W          E                
Sbjct: 1   DVIALQEVTRGFSRNGFADMVADIAALFPDYFWVYGPACDLHVEAPEGGLSPVRGIRFQF 60

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
              V  +      ++  L  ++        R A E ++   G  I V  +HL        
Sbjct: 61  GNMVLSRWPIASTRTLLLPRSRTLGKINPQRGATEAVINAPGGAIRVYSVHLDHVSPD-- 118

Query: 173 LENTYSPSCSLLSQQAQWL----------KDWITQKKESLVPFVIAGDFNRKINYLGN 220
                      L+ Q               ++   +      +VI GDFN +      
Sbjct: 119 ---ERIRQLQFLNAQINAFVQEGGSLTGAAEFDLPEPPLPEDYVILGDFNMEPESPEY 173


>gi|159038088|ref|YP_001537341.1| endonuclease/exonuclease/phosphatase [Salinispora arenicola
           CNS-205]
 gi|157916923|gb|ABV98350.1| Endonuclease/exonuclease/phosphatase [Salinispora arenicola
           CNS-205]
          Length = 260

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 79/309 (25%), Gaps = 79/309 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +RL ++N+          +          D   L      LDAD++ LQE+    + +  
Sbjct: 1   MRLATFNLLHGRSLTDGLV----------DPRQLTAAVAALDADVLALQEVDRNQSRSGN 50

Query: 84  FPKNTWCIF--------YSTERLINHSKRD--------SNNDIHTAIAVRKKNVRVLQQS 127
             +              ++   + +   R          +++    I +  +      Q 
Sbjct: 51  LDQTAIAADALDAAEHRFAAAVVGHPGGRFRPLAHDDDGHDEPRYGIGLISRLPVTSWQV 110

Query: 128 -------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
                         P  G      R   R  +  ++      + V   HL      +   
Sbjct: 111 TRLKPAPVRSPIYVPGPGGGLVVLRDEPRVVLAAVLRTPHGSLTVAATHLSFVPGWN--- 167

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                        A  L   +   +    P V+ GD N               +      
Sbjct: 168 -------------ALQLHQTVRALRALPAPRVLLGDLN---------------LPAGAVR 199

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +        R         ++ +D+ + D+     L          +          +SD
Sbjct: 200 LLSGWRPLGRRPTYPAGHPRVQLDHILADRQGRHLLPPVRAVANPQSV---------ISD 250

Query: 295 HCPISIDYD 303
           H P+ +D D
Sbjct: 251 HRPLVVDLD 259


>gi|322789041|gb|EFZ14499.1| hypothetical protein SINV_10499 [Solenopsis invicta]
          Length = 1157

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/324 (10%), Positives = 70/324 (21%), Gaps = 50/324 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD------ADI--VFLQEMG 75
           V + ++N+N       V     S+     D         +L        DI  +  +E+ 
Sbjct: 533 VSIGTYNVNGGKHFRSVVYKDVSLADWLFDGPGKSSSLVSLQQRDNVPVDIFAIGFEEIV 592

Query: 76  SYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVRVLQQS 127
             NA   +         W          +             +     +R  +   L+  
Sbjct: 593 DLNASNIMAASSDNAKAWAEELQKILCKDTEYVLVTYQQLVGVCLYLFIRPVHAPYLRDV 652

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                        GN+ A  +   +       +  H  +     +  N      +     
Sbjct: 653 AVDCVKTGLGGATGNKGAAAIRCVLYSTSFCFVCAHFAAGQSQVNERNADYAEITRK--- 709

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPN 231
              +   + +   +       GDFN ++    +                 D         
Sbjct: 710 ---ITFPMGRTLNTHDYVFWCGDFNYRVEMDKDEMKELIKQNEFDQILQYDQLKVQQQQG 766

Query: 232 DSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQESFSEIL 279
           +    F +   +     K                    D  +  +      I        
Sbjct: 767 NVFKNFQEGPITFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWKRRKQIPDIDSPTDWNP 826

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
                      + SDH P+    D
Sbjct: 827 GKLVYYGRAELKQSDHRPVIATID 850


>gi|239611755|gb|EEQ88742.1| endonuclease/Exonuclease/phosphatase [Ajellomyces dermatitidis
           ER-3]
 gi|327348230|gb|EGE77087.1| endonuclease/Exonuclease/phosphatase [Ajellomyces dermatitidis ATCC
           18188]
          Length = 1194

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 93/319 (29%), Gaps = 49/319 (15%)

Query: 19  SVAQKVRL--VSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQY----AKNLDADIV 69
           + ++ +R+   ++N+N     +E   +SLW      +  +   +          L     
Sbjct: 605 TSSKLIRVWAGTFNVNGRSNGAEGTDLSLWLLPQLNSLQEDPSILAVGFQEIVELSP--- 661

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTA----IAVRKKNVRV 123
             Q++ S +   ++  +N      +               +         + V+ + +  
Sbjct: 662 --QQIMSTDPGNRLIWENAVKDTLNYYAHSKGVSEYVLLRSGQLVGTALLVFVKSELLTE 719

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCS 182
           ++     +        AGN+    + ++ +  +I  +  HL +     D     Y     
Sbjct: 720 IKVVEGSVKKTGMSGMAGNKGGCAIRLQYSNTRICFVTAHLAAGFSNYDERNRDYQTINQ 779

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWK 226
            L  Q         +  E     +  GDFN +I   G                 +D    
Sbjct: 780 GLRFQR-------NRSIEDHDIIIWLGDFNYRIGLPGDTVRGLIKAGDLESLYEHDQLNL 832

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY--KFLIQESFSEILYNEDD 284
            +    +   + + + +     K        D     + A    +  +  +        +
Sbjct: 833 QMVAGLTFPFYSEARITFPPTYKYDNGTDRYD---TSEKARTPAWCDRILWKGKNIRPLE 889

Query: 285 IKSRGKRLSDHCPISIDYD 303
             +   + SDH P+   +D
Sbjct: 890 YDAAPLKFSDHRPVYATFD 908


>gi|257060729|ref|YP_003138617.1| hypothetical protein Cyan8802_2934 [Cyanothece sp. PCC 8802]
 gi|256590895|gb|ACV01782.1| conserved hypothetical protein [Cyanothece sp. PCC 8802]
          Length = 285

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 76/271 (28%), Gaps = 43/271 (15%)

Query: 11  FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
           FF+    ++ A+ VR+++ NI       G     +S +          +  + L  DIV 
Sbjct: 14  FFVSLMPSASAETVRIMAANI-----TSGNCQCYDSGEG--------IRILQGLKPDIVL 60

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           +QE    +        +T    +  +            +      V  +   +       
Sbjct: 61  IQEWNYRD------NSDTSIRQFVDDVFGEEFSYFRERNSGIPNGVISRFPIIDSGELDD 114

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             A D       R     +++I G  I +  + +       S             ++ + 
Sbjct: 115 NVAPD-------RDFAYAIIDIPG-DINLSAVSVHLLTNDSS-----------RPREVED 155

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L + I          VI GDFN   +           ++ N          D       N
Sbjct: 156 LINDINGVIAPEDYLVIGGDFNTDRHNETALRTLNPVVNTNPPYPV-----DQDGKTGTN 210

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
              + P D    D +     +     E  ++
Sbjct: 211 ASRRKPYDGVYFDSDLTPLEVPVIIGENTFD 241


>gi|123441268|ref|YP_001005255.1| hypothetical protein YE0917 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166918975|sp|A1JKA7|Y917_YERE8 RecName: Full=UPF0294 protein YE0917
 gi|122088229|emb|CAL11018.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 260

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 91/295 (30%), Gaps = 73/295 (24%)

Query: 14  VPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +P  A +     +R++ WNI                K+  + +  + +     DA ++ L
Sbjct: 31  LPPGAPLPTTEFLRVMVWNIF---------------KQQRAQWLSVLKEFGR-DAQLMLL 74

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE  +   + +                     + ++     A+      V  L  ++P+ 
Sbjct: 75  QEAQTTPELVRFA---------------TSHYQAADQVPAFALPQHPSGVMTLAATHPVY 119

Query: 132 GAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                      R +   L+ +    +G+ + V++IH  +F     + +           Q
Sbjct: 120 CCPLREREPLLRLSKSALITVYPIHDGRLLMVVNIHAVNFSLGVDVYSK----------Q 169

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + + + I   +    P ++AGDFN       N    +      + +             
Sbjct: 170 LEPIGEQIAMHRG---PVILAGDFNAWSRQRVNALQRFAQGLGLEEVEFSTD-------- 218

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           N++     P+D+                        D      R SDH P+ +++
Sbjct: 219 NRSRAFGKPLDFVFYRG---------------LTLADASVLVTRASDHNPLLVEF 258


>gi|291326722|ref|ZP_06125600.2| endonuclease/exonuclease/phosphatase family protein [Providencia
           rettgeri DSM 1131]
 gi|291313357|gb|EFE53810.1| endonuclease/exonuclease/phosphatase family protein [Providencia
           rettgeri DSM 1131]
          Length = 242

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 75/289 (25%), Gaps = 71/289 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  + + +V+WNI           +K            L +     D  ++ LQE     
Sbjct: 18  AAGETLDVVTWNI-----------YKQQRPNWKYTLNELVK-----DRKLILLQEAQMSP 61

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +                      K  ++       +     V  L  S+P+        
Sbjct: 62  EL---------------ISFAASHKLIADQVPALPFSPHPAGVMTLAASHPIYCCPLREK 106

Query: 139 RAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R A   L+      NGK + V ++H  +F F   +                 L   
Sbjct: 107 EPLLRLAKSALITVYPLPNGKHLMVANVHAINFSFGVDVYTR-------------QLSKL 153

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                + + P ++AGDFN         +   + I           +        +     
Sbjct: 154 GVHIAKHVGPVILAGDFNAW--SRQRVNALKRFIRSVGLKEIVFSDD------YRTKAFG 205

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            P+DY                  +   +  +       SDH PI   + 
Sbjct: 206 RPLDYVFYRG-------------LNVKDSTVLPTD--ASDHNPIMTKFT 239


>gi|88812088|ref|ZP_01127340.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231]
 gi|88790592|gb|EAR21707.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231]
          Length = 357

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/248 (10%), Positives = 59/248 (23%), Gaps = 36/248 (14%)

Query: 57  LRQYA--KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           +           D++ L E    + V  +     W    +              +    +
Sbjct: 109 VANVLTPNRRAPDLLHLIEKADPDVVLTLESDAWWEQQLTALEPRYPYCLKCPLNNLYGM 168

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  +   V  +   L+        A         V  +G ++ +  +H        +  
Sbjct: 169 HLYSRLELVDPEIRYLVEKDIPSMHAEL-------VLRSGHRLELHCLHPVPPSPTQNET 221

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
           +    +          L        +     ++ GD N            ++ I     L
Sbjct: 222 SAERDA---------ELLIVGRAVGQGNRSVIVTGDLNDVAWSRTTR--LFRKIS--GLL 268

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                         +    + P+D+     +        S   + Y            SD
Sbjct: 269 DPRIGRGLFSTFHAEYPFLRWPLDHLFHSDDF----TLVSIRRLPY----------FGSD 314

Query: 295 HCPISIDY 302
           H PI I+ 
Sbjct: 315 HFPILIEL 322


>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1251

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/304 (10%), Positives = 70/304 (23%), Gaps = 89/304 (29%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++V++N+          +++  +  T      +  + ++LDAD++ LQE+  +    
Sbjct: 283 DQLKIVTFNVLF-------DVYQPELIHTKERTPRMLAFLESLDADVIALQEVTGHFLAQ 335

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +        +                   T   +  +                      
Sbjct: 336 LLEAPWVRASYAV------SDIPGGPTQNPTGQLLMSRLPF------------------- 370

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                                           +N +  +      Q   L   + Q    
Sbjct: 371 -------------------------------EDNMHGDASLRRRSQ---LTSIVQQLCSP 396

Query: 202 LVPFVIAGDFN--RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               V+ GDFN            D W  + PND    F  + +           +  +D 
Sbjct: 397 DEDTVLLGDFNMFSSETLAPRLQDVWAHLHPNDDGFTFDSKHNPLAAIISPNGTRERLDR 456

Query: 260 F-VMDQNAYKFLIQESFSEILYNEDDIKSRGK--------------------RLSDHCPI 298
             +   +                 + + +                        LSDH  +
Sbjct: 457 ICLFSPSRCSLKAAGISIVGREPFEFVPTAPATDAAAAAAAAAAEPLAPISCMLSDHYGL 516

Query: 299 SIDY 302
               
Sbjct: 517 ECTL 520


>gi|312172981|emb|CBX81236.1| hypothetical protein EAIL5_2416 [Erwinia amylovora ATCC BAA-2158]
          Length = 372

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 63/271 (23%), Gaps = 45/271 (16%)

Query: 32  NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI 91
              S+   + +  ++V         L    +    D++   E   +           +  
Sbjct: 91  RGYSDAPRLRVMVSNVLTPNRQAARLLAQVQAEQPDVLIALETDHWWQAQLDVLSADYPY 150

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
                            D    + V  +      +   L+  +             L+  
Sbjct: 151 SLK-----------CPQDNLYGMHVYSRLPLKDAEIQFLVDDEIPSMH-------MLVQL 192

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
                + +  +H       +S E+T   +          L         +  P ++ GD 
Sbjct: 193 DEQTDVRLHCVHPMPPSPTESDESTDRDA---------ELVMVGKSVASAAQPVIVTGDL 243

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N               +  +  L                   + P+D+    Q+      
Sbjct: 244 NDVAWS----RTTQLFLKISGLLDPRRGRGMFCTFHAGYPILRWPLDHVFHSQH------ 293

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   +    I+      SDH PI ID 
Sbjct: 294 --------FVLAGIRRLQNMGSDHFPILIDL 316


>gi|225448996|ref|XP_002273591.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1948

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 71/285 (24%), Gaps = 66/285 (23%)

Query: 26   LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
            ++SWN   L               +     +++ + ++   DIV +QE        +   
Sbjct: 1341 IISWNTRGLG--------------SRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVG 1386

Query: 86   KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                        I V   + ++  +   L               
Sbjct: 1387 SL-------WTARNKEWAVLPACGASGGILVMWDSKKLHSEEVVLGSFS----------- 1428

Query: 146  VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
            V +   ++G + + L                   S +L     + L D           +
Sbjct: 1429 VSVKFAVDGSEQFWLSAVYGP------------NSTALRKDFWEELSDIFGLSSPC---W 1473

Query: 206  VIAGDFNR---------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             + GDFN                +  D    I  N+ +    +      +  +       
Sbjct: 1474 CVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELIDPPLRSASFTWSNMQEHPVCKR 1533

Query: 257  IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +D F+      +   Q     +           +  SDH PI ++
Sbjct: 1534 LDRFLYSNEWEQLFPQSLQDVLP----------RWTSDHWPIVLE 1568


>gi|54026467|ref|YP_120709.1| hypothetical protein nfa44940 [Nocardia farcinica IFM 10152]
 gi|54017975|dbj|BAD59345.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 313

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/251 (9%), Positives = 58/251 (23%), Gaps = 48/251 (19%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           D     +  +  D D++ + E         + P     +  +    +   +  +     +
Sbjct: 105 DPRTFVEQVRAHDIDVLTVNE---------LTPAAVAGLAAAGIDELLPHRYLAPGRTAS 155

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLD 171
              +  ++       Y                 +    +I G   + V  IH     +  
Sbjct: 156 GTGIWSRHPLSDTVEYDGYVLNQ----------LSATAQIPGAGPVSVYAIHPVPPIYDT 205

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
            +                     I +   +  P ++ GDFN   ++    D         
Sbjct: 206 GVWADELARLRT-----------IVENAPADRPALVGGDFNATHDHRQFRDYLTGRFADA 254

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                         +  K     + ID+ ++       +                     
Sbjct: 255 ADQAGAGHLATYPTD--KWWPAVVGIDHILVAGGRATTVEA---------------LDLP 297

Query: 292 LSDHCPISIDY 302
            SDH  +  + 
Sbjct: 298 GSDHRALVAEI 308


>gi|281205129|gb|EFA79322.1| hypothetical protein PPL_07740 [Polysphondylium pallidum PN500]
          Length = 489

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/307 (10%), Positives = 84/307 (27%), Gaps = 49/307 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             ++S+N+   S                   T + +  ++   + + LQE+ +   +  +
Sbjct: 202 FTILSFNVWFDSYL------------WKQRATEMFKLIESKLPNFICLQEV-TPIFLEYL 248

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS--RAG 141
             +      Y               ++   + V+  +      S   L +   +      
Sbjct: 249 AEQPWVRQHYLMSDCGRSDTVFPYGNV---LMVKSHHTLGSNSSPYRLQSITVYPLPTRQ 305

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           NR+ +  L++++   +  +           S              Q + ++ + +Q    
Sbjct: 306 NRKMLTALIQLDSGALMSVSTVHLESLATSSDLRIQQLQTINRINQ-ERIEKYQSQCTTR 364

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            +   + GD N  I    N +   ++     + +    +    C     ++ K  +D  +
Sbjct: 365 EIASFLVGDLNFGIQTPENLEMLNQSFSDLWTTVNPCSQSAITC-----IKKKERVDRIL 419

Query: 262 M--------------DQNAYKFLIQESFSEILYNEDDIKSRGK-----------RLSDHC 296
           +              +Q         + + I      I    +             SDH 
Sbjct: 420 LWQNNNNNNYNNNNNNQQLPIIDANSTINIIGTEPIYIDESTRMSEKIDKSELVYPSDHF 479

Query: 297 PISIDYD 303
            +     
Sbjct: 480 GLYASIT 486


>gi|225351563|ref|ZP_03742586.1| hypothetical protein BIFPSEUDO_03160 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157907|gb|EEG71190.1| hypothetical protein BIFPSEUDO_03160 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 361

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 73/297 (24%), Gaps = 58/297 (19%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           A+         +     RL++ N+                 +  +D   +    ++   +
Sbjct: 121 AIAAVSGASANTQDDYARLMTCNVF----------------KGRADAQEIVDVVRSERVE 164

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ LQE      V ++       +    +   +     +                 L  +
Sbjct: 165 VLALQETTD-AFVDELNKAGIGDLLPYAQVASSDGVYGNG----------------LWSA 207

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            PL+   D    +         V  N  +  +  + + +    D     +  S       
Sbjct: 208 GPLVDPADDDVDSSASFMPGATVAFNDGQTQIRFVSVHTTSPTDGYWQQWKRS------- 260

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L +    + ++   +V  GDFN   ++    +                       N 
Sbjct: 261 ---LDELGRLRYDTSRRYVFMGDFNATDDHAPFRNFLGTRFADAAKQAAGGLVFTWPANI 317

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +        ID+ V+D                   D         SDH  +     F
Sbjct: 318 DYVPTFAG-IDHIVLDSGMLAG------RVKSLKID--------GSDHKALLATVQF 359


>gi|67472728|ref|XP_652152.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|56468968|gb|EAL46766.1| hypothetical protein EHI_061020 [Entamoeba histolytica HM-1:IMSS]
          Length = 380

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/194 (11%), Positives = 64/194 (32%), Gaps = 15/194 (7%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             Q++ ++S+N+   +             R       + ++      DI+FLQ++    +
Sbjct: 57  STQQISVLSYNLCMRAPLVSNEGDDFKNVRLDLFIKNVLEHF-----DIIFLQDVIGAYS 111

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +            T  L++ +           + +  +   +  +   +  ++     
Sbjct: 112 ARRAHLIECAYEKGLTHSLVSLTPILPCFICDGGLLILSRIP-LKDRDQYIFKSRIYPES 170

Query: 140 AGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQ 197
             +R  +   ++ N    + + +  L+S      +         +   Q   L  +I ++
Sbjct: 171 ILSRGILYSKIQPNESTTLHIFNTQLQSISNNPLVN-------QVRLNQLDELVKFILSK 223

Query: 198 KKESLVPFVIAGDF 211
             +   P ++ GDF
Sbjct: 224 TSKDEYPILVCGDF 237


>gi|326479013|gb|EGE03023.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Trichophyton equinum CBS 127.97]
          Length = 612

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/290 (10%), Positives = 83/290 (28%), Gaps = 63/290 (21%)

Query: 22  QKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            K  ++++N   +  +  +      +          LL    +  DADIV LQE+   + 
Sbjct: 297 DKFTVLTYNTLCDRYATHQQYGYAPSKALAWELRRDLLLSEIRGQDADIVCLQEVDQGSY 356

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQSYPLL--- 131
                 +  +  +         ++  S  +              K + + +         
Sbjct: 357 HGFFREQLAYNDYKGVYWPKGRAQGMSEEEAKVVDGCATFFKGSKYILLEKAMIHFGQTA 416

Query: 132 -------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                  G  D ++R   +  + ++V     ++G++I V++       +  + ++     
Sbjct: 417 VRRPDAKGQDDIYNRLWQKDNIAVVVYLENRMSGERIIVVN---AHIYWDPAYKDVKLVQ 473

Query: 181 CSLLSQQAQWLKD---------------------------------------WITQKKES 201
            +++ ++   L +                                        I     S
Sbjct: 474 SAIMMEEVTQLAEKFIKIPPCTDKTAFRFSEPEDETNNGENTSPPTPVEPSPSIEYSSPS 533

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            +P ++ GDFN + +    N      ++     +R     +       + 
Sbjct: 534 QIPILVCGDFNSRPSSAVYNLLAHGRLEEEHPDLRDRLYGNLTRQGMTHP 583


>gi|15805659|ref|NP_294355.1| hypothetical protein DR_0632 [Deinococcus radiodurans R1]
 gi|6458338|gb|AAF10216.1|AE001921_8 hypothetical protein DR_0632 [Deinococcus radiodurans R1]
          Length = 329

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 72/294 (24%), Gaps = 60/294 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   S A+ + ++S N +  S                          +   AD++ +QE 
Sbjct: 88  PVQTSDARPLTILSLNADFASAPAAQVAALA----------------RREGADLLLIQE- 130

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                + +     T+           H         H  +    +   +         + 
Sbjct: 131 ----GLTRQRDTVTYAAALRRALPGWH------FAQHDELLSFSRLPLLEAGPVTFPHSP 180

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLK----SFCFLDSLENTYSPSCSLLSQQAQW 190
                      + + V  +G+ + + ++HL          D+      P       Q + 
Sbjct: 181 H--------ALLWMRVRWDGQVLNIYNVHLTTNGLLPSRSDTRLGRTLPQRVSRRLQVKR 232

Query: 191 -LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
                +  +     P +  GDFN          +    +        F          + 
Sbjct: 233 DFLSLVAGQLRRPGPALFVGDFNAPP-----RGELAARLRVLGLQDAFAVAGSGFGFTHA 287

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  IDY                       D+ ++   RLSDH  + +   
Sbjct: 288 AQLGHSRIDYVWESG---------------LQVDEARALPDRLSDHRALLVRLS 326


>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
 gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
          Length = 891

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 80/309 (25%), Gaps = 40/309 (12%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEM 74
           T  +  K+ + S+N+    E             + + Y L+       +A  D++ LQE+
Sbjct: 212 TPFMPSKLVVASYNVLAEFEWPP----------SEARYPLVVNNILAENAHADVLVLQEV 261

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                ++ +         Y         +            V  +     + + P     
Sbjct: 262 TD-GFLSYLLSDKWIREAYPFCTHGPPHEDGIEPLPSYLNIVITRAPWSPRSNMPAGPTA 320

Query: 135 DSFSRAGNRRAVELLVEING---------KKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
            S      R  V  +   +G         K        L       +    +  + +   
Sbjct: 321 TSSF----RVVVAAVHLSHGLGRWSGGGQKDRHQTGYRLPLRELPWAPMEFWRATSTSRR 376

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           +    +   +  K  S +      + +   +     D +  + + +        E+ +  
Sbjct: 377 RP-SSINTALKNKAISDLSLSHLANLDGLFDEAKLVDAWKTSTENDADDSEVEGEQGATW 435

Query: 246 NANKNLR-----------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +   N                  D  ++    +  +   +F+   +  +         SD
Sbjct: 436 DPTANGMAAAMAAGGGNTRPQRYDRILVRGEGFLKIT--NFNMFGFLTEQGDDSKMFASD 493

Query: 295 HCPISIDYD 303
           H  +    D
Sbjct: 494 HWGVRCSLD 502


>gi|332992219|gb|AEF02274.1| endonuclease/exonuclease/phosphatase family protein [Alteromonas
           sp. SN2]
          Length = 323

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 84/316 (26%), Gaps = 80/316 (25%)

Query: 3   RKYVLALVFFLVPCTASVA-------------QKVRLVSWNINTLSEQEGVSLWKNSVKR 49
           + +V      ++  ++                  + + S+N+                  
Sbjct: 61  KYWVFCFFLLMILISSPFQLNLLKGSEESLKYDTLNIASFNV-----------------A 103

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
              D  +L  + ++ D DI+F+QE      +      + +                S+  
Sbjct: 104 QRVDEAVLYAWFRHHDIDILFIQEARDKQ-LDAAEENDLY----------------SSCK 146

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +  +             L     F+   +       + +  KK+++++ H  S   
Sbjct: 147 PRLCVLSKYPIEDYETIDRRALEEWGLFASLHS-------ILVGKKKVFLMNTHFASISN 199

Query: 170 LDSLENTYSPSCSLLSQQAQW------LKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
                ++ +   S +    +       L   +         F+IAGDFN   +       
Sbjct: 200 FGFEFSSLNGFLSKMILFKESKAIEFGLVKSMLSSFVYDEHFIIAGDFNIT-DRNPQYKK 258

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
           +W   +       F +      +   +      ID+ ++                    +
Sbjct: 259 YWGNFE-----NLFREVGFGYGSTRIHPWLSPRIDHVLISNKLKA--------------N 299

Query: 284 DIKSRGKRLSDHCPIS 299
                    SDH PI 
Sbjct: 300 KALVGNDLGSDHLPIL 315


>gi|225470786|ref|XP_002269691.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 693

 Score = 52.6 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/293 (11%), Positives = 76/293 (25%), Gaps = 69/293 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN   L               +     +++ + ++   DIV +QE        + 
Sbjct: 1   MKIISWNTRGLG--------------SRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRF 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                                         I V   + ++  +   L             
Sbjct: 47  VGS-------VWTARNKEWAVLPACGASGGILVMWDSKKLHSEEVVLGSFS--------- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V +   ++G + + L                   S +L     + L D          
Sbjct: 91  --VSVKFAVDGSEQFWLSAVYGP------------NSTALRKDFWEELSDIFCLSSPC-- 134

Query: 204 PFVIAGDFNR---------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
            + + GDFN                +  D    I  N+ +    +      +  +     
Sbjct: 135 -WCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELIDPPLRSASFTWSNMQEHPVC 193

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID---YDF 304
             +D F+      +   Q     +           +  SDH PI ++   ++F
Sbjct: 194 KRLDRFLYSNEWEQLFPQSLQDVLP----------RWTSDHWPIVLETNPFNF 236


>gi|323357932|ref|YP_004224328.1| hypothetical protein MTES_1484 [Microbacterium testaceum StLB037]
 gi|323274303|dbj|BAJ74448.1| hypothetical protein MTES_1484 [Microbacterium testaceum StLB037]
          Length = 332

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 67/286 (23%), Gaps = 62/286 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++ +V+WN                          + +  +   AD+V L E  +  A   
Sbjct: 102 ELVVVAWNTYGGGASP----------------ESIARLVRETGADVVSLPETDADAAAE- 144

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN---VRVLQQSYPLLGAKDSFSR 139
                                          I  R+        L  +        +   
Sbjct: 145 ----------------------------VVGILSREGIRMTPSTLVAAPGDDPVPTTLLV 176

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY-SPSCSLLSQQAQWLKDWITQK 198
           A +     L +           +   +     +L   +  P   L+        DW+  +
Sbjct: 177 AESMGPYVLDLAAGSTPGVPSGVFRPAQGGGPTLVAAHPLPPLPLIMTDWTEGMDWVAAQ 236

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKIPI 257
             S    ++AGD N  +++L        T+                            PI
Sbjct: 237 CSSPD-VILAGDLNSTLDHLAGLGRNGGTVGECRDAAAEAGAAAVGTWPVRLPPGLAAPI 295

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+ ++           ++    +            SDH PI     
Sbjct: 296 DHVLVG---------SAWEVRGFEVRTDFDDA--GSDHRPIVATLS 330


>gi|310768146|gb|ADP13096.1| Endonuclease/exonuclease/phosphatase [Erwinia sp. Ejp617]
          Length = 372

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 63/271 (23%), Gaps = 45/271 (16%)

Query: 32  NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI 91
              S+   + +  ++V         L    +    D++   E   +           +  
Sbjct: 91  RGYSDAPRLRVMVSNVLTPNRQAPRLLAQVQAEQPDVLIALETDRWWQSQLDVLSADYPY 150

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
                            D    + V  +      +   L+  +             L+  
Sbjct: 151 SLK-----------CPQDNLYGMHVYSRLPLKDAEIQYLVDDEIPSMH-------MLVQL 192

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
                + +  +H       +S E+T   +          L         +  P ++ GD 
Sbjct: 193 DEQTDVRLHCVHPMPPSPTESDESTDRDA---------ELVMVGKSVASAAQPVIVTGDL 243

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N               +  +  L                   + P+D+    Q+      
Sbjct: 244 NDVAWS----RTTQLFLKISGLLDPRRGRGMFCTFHAGYPLLRWPLDHVFHSQH------ 293

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   +    I+      SDH PI ID 
Sbjct: 294 --------FVLAGIRRLQNMGSDHFPILIDL 316


>gi|302405847|ref|XP_003000760.1| endonuclease/exonuclease/phosphatase family protein [Verticillium
           albo-atrum VaMs.102]
 gi|261360717|gb|EEY23145.1| endonuclease/exonuclease/phosphatase family protein [Verticillium
           albo-atrum VaMs.102]
          Length = 273

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 66/316 (20%), Gaps = 73/316 (23%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV-----KRTTSDYTLLRQYA 61
           LAL+   V  +A   Q VR V++NI   +                   +      +    
Sbjct: 10  LALLLNAVAISAQGTQAVRAVTFNIRYDAGSRESGEKPWWDAFCWASASRCRQPHVINQL 69

Query: 62  KNLDA-------DIVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTA 113
             + A        ++ LQE+ +           + W            +   S      A
Sbjct: 70  SQIAAGAPSGAVTVIGLQEVLNNQLNDIKNGLGSGWSHIGVGRDDGRTNGEFSPILYRPA 129

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            A+R         S         +     R     + E        +     S       
Sbjct: 130 -ALRVLFSETKWLSPTPDVVSFGWGAGSRRVVTLAVFESVTTGKRFITPTRTSTT----- 183

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                                            +AGD                +    D 
Sbjct: 184 ---------------------------------LAGDA---------YQTLLNSGYAQDL 201

Query: 234 LIRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                  +      N             ID+  +       +    +S   Y     ++ 
Sbjct: 202 YNLATPAQRIGPYGNTYTTFTAGAPTSRIDFIWLGP-----VADRRYSVQRYEILSNEAS 256

Query: 289 GKRLSDHCPIS--IDY 302
           G   SDH  +   +  
Sbjct: 257 GMLFSDHRAVVGDVTL 272


>gi|260889343|ref|ZP_05900606.1| DNAse I protein DHP2 [Leptotrichia hofstadii F0254]
 gi|260860754|gb|EEX75254.1| DNAse I protein DHP2 [Leptotrichia hofstadii F0254]
          Length = 293

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 88/316 (27%), Gaps = 55/316 (17%)

Query: 5   YVLALVFFLVPCT-----------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
             + L+F +  C             +    + + S+N   L E+               D
Sbjct: 10  IFVFLIFGIFSCFKKGQINEEIGINNDENTILVASFNALRLGEK-------------QKD 56

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAK------VFPKNTWCIFYSTERLINHSKRDSN 107
           Y    Q       D++ L+E+ +   V K            W    S   + + + R   
Sbjct: 57  YRTFAQILAKF--DLIGLEEVMNEKGVKKTQAYLEKLTNEKWDYIISENSVGSENYR--- 111

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
              + A   RK      +    L   K+       R       +        +       
Sbjct: 112 --EYFAFIYRKSKFSEARG---LGFYKEKDENEFMREPYGAYFKAGNFDFVYII---AHS 163

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
            F D  +     + + ++     + ++ ++  +     +IAGDFN   + +   +   K 
Sbjct: 164 VFGDKEKQRLLEAANYVN-----VYEYFSKLTDEDD-IIIAGDFNTPADNMAFKNMADKY 217

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                    +    +       + +     D F ++    K              ++   
Sbjct: 218 NVK------YVLNPEENLTTLSDSKLVSSYDNFFINFEKTKEFTGNFGVYNFIKNNNYAI 271

Query: 288 RGKRLSDHCPISIDYD 303
             K +SDH  I  +Y 
Sbjct: 272 IKKYVSDHLLIFSEYS 287


>gi|114654104|ref|XP_001163086.1| PREDICTED: angel homolog 1 isoform 1 [Pan troglodytes]
 gi|114654106|ref|XP_001163119.1| PREDICTED: angel homolog 1 isoform 2 [Pan troglodytes]
          Length = 624

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 198 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDH 257

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 258 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 317

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 318 VGLVLLLQPLVPEGLGQVSVAPLCVANTHILYNPRRGDVKLAQMAILLAEVDKVARLSD- 376

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 377 -----GSHCPIILCGDLNSVPDSPLYN 398


>gi|114654101|ref|XP_001163194.1| PREDICTED: protein angel homolog 1 isoform 3 [Pan troglodytes]
          Length = 670

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 244 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDH 303

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 304 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 363

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 364 VGLVLLLQPLVPEGLGQVSVAPLCVANTHILYNPRRGDVKLAQMAILLAEVDKVARLSD- 422

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 423 -----GSHCPIILCGDLNSVPDSPLYN 444


>gi|55641101|ref|XP_510084.1| PREDICTED: angel homolog 1 isoform 4 [Pan troglodytes]
          Length = 682

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 256 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDH 315

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 316 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 375

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 376 VGLVLLLQPLVPEGLGQVSVAPLCVANTHILYNPRRGDVKLAQMAILLAEVDKVARLSD- 434

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 435 -----GSHCPIILCGDLNSVPDSPLYN 456


>gi|71412591|ref|XP_808473.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70872686|gb|EAN86622.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 535

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 61/241 (25%), Gaps = 20/241 (8%)

Query: 33  TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92
                  V        +       L    +  D DIV LQE+        ++    +C +
Sbjct: 136 YYPYDPSVDKELPPFLQPDFRRAYLVNEIRYYDPDIVCLQEVNRVFFNDVLWKYIRYCGY 195

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-------------PLLGAKDSFSR 139
            +  +     K  +       +  R K      +                L+  KD    
Sbjct: 196 GTLYQSSRGYKVRALRRGDNPLLPRHKGKIEEAEDIGNVVLFHKGRFVPILMPGKDLVQN 255

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                 V +  +I    + V+ +   +    ++++     +   L      L        
Sbjct: 256 LHFAHVVAMRDKITNMTLNVVCVQYTAGESEEAVKIRLHEARQTLQV-LDALNR--NDTD 312

Query: 200 ESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            + +   I GDFN   +         + F+   D            +    + K  +   
Sbjct: 313 RAHMSNAICGDFNNVHDEEACVQLMRERFFSMHDVVGGPRWTTWFHEDAQTSAKYQKYYA 372

Query: 256 P 256
            
Sbjct: 373 R 373


>gi|332223363|ref|XP_003260839.1| PREDICTED: protein angel homolog 1 [Nomascus leucogenys]
          Length = 667

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 241 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDH 300

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 301 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 360

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 361 VGLVLLLQPLVPEGLGQVSVAPLCVANTHILYNPRRGDVKLAQMAILLAEVDKVARLSD- 419

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 420 -----GSHCPIILCGDLNSVPDSPLYN 441


>gi|224282153|ref|NP_056120.2| protein angel homolog 1 [Homo sapiens]
 gi|17369713|sp|Q9UNK9|ANGE1_HUMAN RecName: Full=Protein angel homolog 1
 gi|5524739|gb|AAD44362.1|AF111169_2 KIAA0759 [Homo sapiens]
 gi|52545611|emb|CAB70667.2| hypothetical protein [Homo sapiens]
 gi|119601668|gb|EAW81262.1| angel homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
 gi|119601669|gb|EAW81263.1| angel homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
 gi|168267560|dbj|BAG09836.1| angel homolog 1 [synthetic construct]
          Length = 670

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 244 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDH 303

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 304 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 363

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 364 VGLVLLLQPLVPEGLGQVSVAPLCVANTHILYNPRRGDVKLAQMAILLAEVDKVARLSD- 422

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 423 -----GSHCPIILCGDLNSVPDSPLYN 444


>gi|11359908|pir||T46340 hypothetical protein DKFZp434B0814.1 - human (fragment)
 gi|3882239|dbj|BAA34479.1| KIAA0759 protein [Homo sapiens]
          Length = 673

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 247 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDH 306

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 307 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 366

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 367 VGLVLLLQPLVPEGLGQVSVAPLCVANTHILYNPRRGDVKLAQMAILLAEVDKVARLSD- 425

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 426 -----GSHCPIILCGDLNSVPDSPLYN 447


>gi|291441516|ref|ZP_06580906.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291344411|gb|EFE71367.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 262

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/291 (9%), Positives = 68/291 (23%), Gaps = 66/291 (22%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L+P +   A+ + +V  N++  +     +    +  R                 D++ L
Sbjct: 35  LLLPGSGPGARDLVVVQHNVSDENPDPAGTARALAAAR----------------PDLIAL 78

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+                           +     + +   + +  +      +   + 
Sbjct: 79  QELVPRAL---------------PVYERTLAAHYPYHAVRGTVGLWSRYPLADARPLNIR 123

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               +         +  +V      +     HL S         +     S     A  L
Sbjct: 124 PRGITGFWER---GLRTVVRTPHGDVAAYVAHLPSVRVGAGGLASSRRDES-----AGLL 175

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + +    E L   ++ GD N  ++  G      +                    +    
Sbjct: 176 GEALA--AEDLETVILLGDLNGTVDDRGLAPVTSRMNVAERGF----------AFSFPAA 223

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID  +        +     +                SDH P++   
Sbjct: 224 FPLARIDQVMARSATVGRIRALPAT---------------GSDHLPVTARI 259


>gi|238063240|ref|ZP_04607949.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
 gi|237885051|gb|EEP73879.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
          Length = 331

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/289 (10%), Positives = 73/289 (25%), Gaps = 64/289 (22%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            ++    +R+++ N+   +   G                 +    ++   D++ +QE  +
Sbjct: 99  PSASGPTLRVLTANLLAGAADAGT----------------VVDLVRDQRVDVLAVQEF-T 141

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A A++       +    +         S                 L   +P+ G    
Sbjct: 142 PGAAAELDRLGLADLLPHRQLNAQVGTTGSG----------------LYARFPIAGGGIR 185

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R              G         +           +  PS      Q  + +  + 
Sbjct: 186 QHR-------------GGWGFTQAYGSIAPPGGPPVRVESVHPSAPHAIDQVGFWRTDLE 232

Query: 197 QKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            +  +       ++AGDFN  +++    +                           +   
Sbjct: 233 AQPPATPDAGLSILAGDFNATLDHALLRELLATGYVDAADATGAGLVGTWGPYDG-DPIP 291

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + ID+ ++D+      +                RG   SDH  +  + 
Sbjct: 292 PVTIDHVLVDRRIAVRSVSV--------------RGVPGSDHRAVLAEL 326


>gi|68483026|ref|XP_714547.1| potential inositol polyphosphate-5-phosphatase Inp51p [Candida
           albicans SC5314]
 gi|46436124|gb|EAK95492.1| potential inositol polyphosphate-5-phosphatase Inp51p [Candida
           albicans SC5314]
          Length = 986

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 51/304 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87
           ++N+N    +  +  W        +DY L+           + LQE+   NA   V    
Sbjct: 594 TFNVNGSVYEGDIDKWIYPE---ENDYDLI----------FIGLQEIVVLNAGQMVNTDF 640

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGAKDSFSR 139
                +  + L    KR+    + +           V++  V+ +               
Sbjct: 641 RNKTQWERKILGVLQKRNKYMVMWSGQLGGVALYFFVKESQVKYVSNVECSFKKTGLGGV 700

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           + N+  + +  + +   I  +  HL +        +    +        + ++    ++ 
Sbjct: 701 SANKGGIAVSFKFSDTTICFVSAHLAAGLSNIEERHQNYKAL------IKGIQFSKNRRI 754

Query: 200 ESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDS 243
           ++    +  GDFN +I+   +                 D   K +   +S   F +++ +
Sbjct: 755 QNHDAVIWLGDFNYRIDLTNDQVKPMILQKLYAKIFECDQLNKQMANGESFPFFSEQEIN 814

Query: 244 RCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                K  +     D                ++  S   ++        +    SDH P+
Sbjct: 815 FPPTYKFDKGTKVYDTSEKQRI---PAWTDRILFLSRQNLIEPLSYNSCQNLTFSDHRPV 871

Query: 299 SIDY 302
              +
Sbjct: 872 YATF 875


>gi|68482834|ref|XP_714643.1| potential inositol polyphosphate-5-phosphatase Inp51p [Candida
           albicans SC5314]
 gi|46436227|gb|EAK95593.1| potential inositol polyphosphate-5-phosphatase Inp51p [Candida
           albicans SC5314]
          Length = 937

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 51/304 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87
           ++N+N    +  +  W        +DY L+           + LQE+   NA   V    
Sbjct: 545 TFNVNGSVYEGDIDKWIYPE---ENDYDLI----------FIGLQEIVVLNAGQMVNTDF 591

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGAKDSFSR 139
                +  + L    KR+    + +           V++  V+ +               
Sbjct: 592 RNKTQWERKILGVLQKRNKYMVMWSGQLGGVALYFFVKESQVKYVSNVECSFKKTGLGGV 651

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           + N+  + +  + +   I  +  HL +        +    +        + ++    ++ 
Sbjct: 652 SANKGGIAVSFKFSDTTICFVSAHLAAGLSNIEERHQNYKAL------IKGIQFSKNRRI 705

Query: 200 ESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDS 243
           ++    +  GDFN +I+   +                 D   K +   +S   F +++ +
Sbjct: 706 QNHDAVIWLGDFNYRIDLTNDQVKPMILQKLYAKIFECDQLNKQMANGESFPFFSEQEIN 765

Query: 244 RCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                K  +     D                ++  S   ++        +    SDH P+
Sbjct: 766 FPPTYKFDKGTKVYDTSEKQRI---PAWTDRILFLSRQNLIEPLSYNSCQNLTFSDHRPV 822

Query: 299 SIDY 302
              +
Sbjct: 823 YATF 826


>gi|311746378|ref|ZP_07720163.1| endonuclease/exonuclease/phosphatase [Algoriphagus sp. PR1]
 gi|126575264|gb|EAZ79596.1| endonuclease/exonuclease/phosphatase [Algoriphagus sp. PR1]
          Length = 351

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 77/269 (28%), Gaps = 49/269 (18%)

Query: 34  LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY 93
             ++ G+ L  ++V +    Y  L         D+VFL E               W    
Sbjct: 96  FDQENGIHLMVSNVYQFNKSYDKLVDLVLKTSPDLVFLVETDQK-----------WKDGI 144

Query: 94  STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153
           S       +K     D    + +  +   V Q+   L+  +        +         +
Sbjct: 145 SKIEEEYENKILIPLDNTYGMLLYTRLEIVSQKIEYLIDDEIPSIELELKL-------KS 197

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
           GK I V  IH       ++ ++T   +          +     + K +  P ++ GD N 
Sbjct: 198 GKIITVYAIHPTPPVPNENPKSTERDA---------EILIVGKKAKANKNPSLVIGDLND 248

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLI 271
                         +  ++                K    + P+D+  + +     +  +
Sbjct: 249 VAWSYTTEL----FLKVSEMSDPRRGRGLFSTYNAKIPLFRWPLDHVFLSKQFGLTELKV 304

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISI 300
             S +                SDH PIS+
Sbjct: 305 MPSIN----------------SDHFPISM 317


>gi|301621140|ref|XP_002939922.1| PREDICTED: sphingomyelin phosphodiesterase 3-like [Xenopus
           (Silurana) tropicalis]
          Length = 659

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 73/248 (29%), Gaps = 26/248 (10%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    +  K+  +  +   Y    +  +S         +++ +    +   
Sbjct: 358 NLDFLCLQEVFDKRSAKKLKEQLHYYFEYVLYDVGVYSCHGCCGFKFLNSGLLFASRYPI 417

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +    +     +   + A  + A+ + V++         +   S   L +L         
Sbjct: 418 LDATYHCYPNGRGIDALAA-KGALFVKVQVGTTPQDQRIVGYISCTHLHALAGD----AM 472

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFN-RKINYLGNNDDFWKTID 229
              +Q   L++W+++ ++S                VI GD N    +     +       
Sbjct: 473 TRCEQLDMLQEWVSEFRKSTSSSSAANPEELVAFDVICGDLNFDNCSSEDKLEQQHSLFT 532

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                 R    ++        L  +   D  V   +  + +++       Y         
Sbjct: 533 HYKDPCRLSPGEEKPWAIGTLLDPEGLYDEEVCTPDNLQKVLENEEGRKEYLVYPTSKN- 591

Query: 290 KRLSDHCP 297
                HCP
Sbjct: 592 -----HCP 594


>gi|327268597|ref|XP_003219083.1| PREDICTED: synaptojanin-1-like [Anolis carolinensis]
          Length = 1295

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   +   ++  D      DI  +
Sbjct: 528 SKPKKIRICTGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKIGGISEFQDRRSKPIDIFAI 587

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W          ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVSASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               +  + L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFIEICRKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDALIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFIEGKIAFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     ++   +   G+   + SDH P+    D
Sbjct: 822 EDMDLLNSTCHDESKLIYTWSPGTLLYYGRAELKTSDHRPVVAMID 867


>gi|224064263|ref|XP_002189179.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 590

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 75/303 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +      Y    +  +S     S   +++ +    +   
Sbjct: 289 NLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPV 348

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y             ++ A+ L V++         +   S   L ++        +
Sbjct: 349 MDA-AYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDT----T 403

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNN--------- 221
           +  +Q   L+DW+++ ++S                V+ GD N       +          
Sbjct: 404 VRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVLCGDLNFDNCSSEDKLEQQHSLFT 463

Query: 222 -----------------------------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                                              D+  K ++  +    +     S+ +
Sbjct: 464 HYKDPCRVGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNH 523

Query: 247 ANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            +     K         IDY +  +       +    E  +           L+DH P++
Sbjct: 524 GSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLA-----GLTDHLPVA 578

Query: 300 IDY 302
           +  
Sbjct: 579 MRL 581


>gi|289614844|emb|CBI58381.1| putative synaptojanin-like protein [Sordaria macrospora]
          Length = 1328

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 85/315 (26%), Gaps = 43/315 (13%)

Query: 19  SVAQKVRLV--SWNINT--LSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFL 71
           S  +K+R++  ++N+N       E +S W    +   +   ++    Q    L+      
Sbjct: 605 STNEKIRILIGTFNLNGKTDGIDEDLSSWLCPPELGEAQPEIVAIGFQEIVELNP----- 659

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKKNVRVLQQSYP 129
           Q++ + +   K   +                ++     +      A+          +  
Sbjct: 660 QQIMNSDPTRKQLWERAIKGTLDRHYNRPDDEKYVLLRSGQLVGAALCIFVKASALHNIK 719

Query: 130 LLGA----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
            +            AGN+ AV + ++     I  +  HL +        N    + S   
Sbjct: 720 NVEGSVKKTGLSGMAGNKGAVAIRLDYANTPICFVTAHLAAGFTNYEERNRDYATISHG- 778

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
                L+    +        +  GDFN +I     N            L    +      
Sbjct: 779 -----LRFQRNRGINDHESVIWFGDFNYRIGLDLENTKDLVRKGDLPKLYANDQLNLQMM 833

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSE-----ILYNEDDIKSRGK---------- 290
                            +      +  ++F       I    D I  +G           
Sbjct: 834 AGYAFHYYSEA--RITFNPTYKYDVGTDTFDTSEKARIPAWTDRILRKGHNLRQLCYNSA 891

Query: 291 --RLSDHCPISIDYD 303
             R SDH P+   ++
Sbjct: 892 PLRFSDHRPVYAVFE 906


>gi|149276635|ref|ZP_01882778.1| Endonuclease/exonuclease/phosphatase [Pedobacter sp. BAL39]
 gi|149232304|gb|EDM37680.1| Endonuclease/exonuclease/phosphatase [Pedobacter sp. BAL39]
          Length = 354

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/275 (10%), Positives = 69/275 (25%), Gaps = 54/275 (19%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
           N+  L              R + DY  L    +  D D++ + E   +           +
Sbjct: 102 NLRMLIANVYQ------ENRQSGDYHKL---IQKCDPDVILMVETNKWWQDQMDCISKDY 152

Query: 90  CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
                      +            + +  +        + L+                 +
Sbjct: 153 PHQLKAPLENTY-----------GMLLYSRLPLDEGAIHYLVEEDIPSIET-------AV 194

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
              +G+ + +  +H +     ++  +T            + +     + +   +P ++AG
Sbjct: 195 KLKSGQLVKLYCLHPQPPVPQENPRSTERD---------KEILMVAEKARSCKLPVIVAG 245

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           D N            +  I     L              K    + P+D+          
Sbjct: 246 DLNDVAWSYTTE--LFTKIS--GLLDPRRGRGFFNSFNAKYFFLRFPLDHIFCS------ 295

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                     +    IK      SDH P+ +D  +
Sbjct: 296 --------TEFTLSSIKRMDACGSDHFPMCVDLQY 322


>gi|6760079|gb|AAF28187.1|AF162781_1 SH2-containing inositol 5-phosphatase 2 [Mus musculus]
          Length = 1257

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 429 IGTWNMGSVPPPKNVTSWFTSKGLGKA-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 486

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 487 RGGLKELTDLDYRPIA----MQSIWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 542

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 543 GAVGVSFMFNGTSFGFVNCHLTSGNEKTTRRNQNYLDILRLLSLGDRQLSAFDISLRF-- 600

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 601 ---THLFWFGDLNYRLDMDIQEILNYISRREFEPLLRVDQLNLEREKHKVFLRFSEEEIS 657

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 658 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 713

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 714 IVT-----SDHSPVFGTFE 727


>gi|312140848|ref|YP_004008184.1| integral membrane protein [Rhodococcus equi 103S]
 gi|311890187|emb|CBH49505.1| putative integral membrane protein [Rhodococcus equi 103S]
          Length = 333

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 76/291 (26%), Gaps = 67/291 (23%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A     +R++  NI                   ++D T L Q  ++   D++ LQE+
Sbjct: 93  SVGAPTGPTIRVMQSNI----------------MVGSADPTALVQAVRDQGVDVLTLQEL 136

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +  AVA +       +   T                    +  +      ++   +   
Sbjct: 137 -TEPAVAALRDSGLEDVLPHTFLEPRVGGNGGG--------IYSRLPLSNGRTVEGMALT 187

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +          + + V+    +  VL        F       Y       ++    L+D 
Sbjct: 188 N----------LVVDVDAGLGEPVVL--------FDVHPVPAYIAPAEHWTEDFDRLRDA 229

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-RN 253
           +     S    +++GDFN   ++    D     +     +    +             R 
Sbjct: 230 MDAAAVSDN-VIVSGDFNATYSHRKFRD-----LRHGGYVDAADQLGAGILPTYPTDKRY 283

Query: 254 KIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID+ +        L +                    SDH  +  + 
Sbjct: 284 PAIVGIDHVLTKGAQATSLERVEV---------------AGSDHYGLIAEL 319


>gi|229011485|ref|ZP_04168673.1| hypothetical protein bmyco0001_19350 [Bacillus mycoides DSM 2048]
 gi|228749776|gb|EEL99613.1| hypothetical protein bmyco0001_19350 [Bacillus mycoides DSM 2048]
          Length = 219

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/229 (11%), Positives = 70/229 (30%), Gaps = 28/229 (12%)

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             KN                ++  +     +A   K   + +++      ++S       
Sbjct: 9   LKKNVAQYIADQSGYPVCVFKEYPDSPDEGLAFLSKVPILAEEAIWETDIEESNYC---- 64

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               + + +  K+  +   ++               S  +  +Q   + +WI  +     
Sbjct: 65  ---AIRIMLKYKEYKLGITNVHLNW----------KSSKVRKEQLDTVNNWIKNRGSGYE 111

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTI--------DPNDSLIRFPKEKDSRCNANKNLRNKI 255
             ++ GDFN + +   +                + ++ L +   +     N   + + + 
Sbjct: 112 --LLCGDFNDEPHSGVHQYLISNQWIDVAQLKENQDNILAQPTLDYGKNTNLIGDEKQEE 169

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             D+ ++ Q    F      +  ++ +  + S     SDH  + ID  F
Sbjct: 170 RYDWILI-QEKDSFESLNIENVSVFGDLALTSSHVFPSDHYGVFIDLKF 217


>gi|319900633|ref|YP_004160361.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319415664|gb|ADV42775.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 352

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/338 (9%), Positives = 69/338 (20%), Gaps = 78/338 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            +  ++ WNI     +                Y  +      L  D V   E+ +Y    
Sbjct: 23  NEFTVLQWNIWQEGTKVPGG------------YDAIVNEIVRLKPDFVTFSEVRNYRNTR 70

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                          + +     +  +       +  ++      +              
Sbjct: 71  ---------FCDRIVQSLKSKGENYYSFYSYDTGLLSRHPITDSLTVFPEKDDHGSIYKM 121

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP------------SCSLLSQQAQ 189
                   + +    +  L+    +    D       P              SL     +
Sbjct: 122 TSHINGHKIAVYTAHLDYLNDAYYNVRGYDGSTWKEIPVPQTVREVLEVNDASLRDDAIR 181

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND-------------DFWKTIDPNDSLIR 236
              D   +  E     ++ GDFN   +     +                  +  N+  I 
Sbjct: 182 KFIDAARKDIEEGTVVILGGDFNEPSHLDWTRETKDLYDHNGLIVPWTVSLLLDNNGFID 241

Query: 237 FPKEKDSRCNANKNLRNKI--------------------PIDYFVMDQNAYKFLIQESF- 275
             +E     +A                             IDY     +    L   +  
Sbjct: 242 TYRELHPDVSAYPGFTFPADNPLAKVENLTWAPKSDERDRIDYIFFYPHPAIRLKDAAIF 301

Query: 276 -----------SEILYNEDDIKSRGKRLSDHCPISIDY 302
                            +  +   G   +DH  + + +
Sbjct: 302 GPQGSIVKSQRVTEKTKDKFVLPAGVWPTDHKGLLVTF 339


>gi|300863989|ref|ZP_07108897.1| hypothetical protein OSCI_510002 [Oscillatoria sp. PCC 6506]
 gi|300338010|emb|CBN54043.1| hypothetical protein OSCI_510002 [Oscillatoria sp. PCC 6506]
          Length = 160

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 46/160 (28%), Gaps = 29/160 (18%)

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R+ V   V + GK I +L +H                S    ++Q   + ++  Q     
Sbjct: 21  RKVVSTDVRVQGKIISILAVHPSVPT--------RQKSFIDRNKQLAAIGEYAAQI---K 69

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+ GDFN  +            +                          IPID+ ++
Sbjct: 70  NPVVVVGDFNVTMWSPFYKSM----VKTGGLRNARSGFGILPTWPTNKPLLYIPIDHCLI 125

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++     I+                    SDH P+  D 
Sbjct: 126 TKDIQVLNIRTGRKI--------------GSDHLPLITDL 151


>gi|302908054|ref|XP_003049782.1| hypothetical protein NECHADRAFT_56855 [Nectria haematococca mpVI
           77-13-4]
 gi|256730718|gb|EEU44069.1| hypothetical protein NECHADRAFT_56855 [Nectria haematococca mpVI
           77-13-4]
          Length = 515

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/319 (8%), Positives = 68/319 (21%), Gaps = 81/319 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R++++N+     +      K              ++  N  ADI+ +QE G       
Sbjct: 228 QLRVMTYNLWFGGGKFKDYHDKQ------------LRFIVNSKADIIGIQEDGDGERAKA 275

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     W  + S                     +  K                       
Sbjct: 276 LAEALGWHYWASKVSHS----------------ILSKYPIESTSGNINRS---------- 309

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLD---------SLENTYSPSCSLLSQQAQWLKD 193
                + ++ + + +     HL    +           + +       S    Q +    
Sbjct: 310 -GGARIELDGDWQTVNFWVAHLNYKPYGPYDFCYSGMKADKVMQREYDSGRPTQVEDTLK 368

Query: 194 WITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDS------------------ 233
            +     +    P  + GDFN   +    +    K                         
Sbjct: 369 AMKYDLRTADIEPLFLVGDFNAPSHLDWTDKRKKKNCGQGKFNWPTSMKPTEAGMIDSYR 428

Query: 234 --LIRFPKEKDSRCNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                  +++                      +D+        + +              
Sbjct: 429 VAHPDPDQDEGITYGPITPWNKDWGKEEPHERLDFIYYMGAGLEVVDSWVMK----PPKS 484

Query: 285 IKSRGKRLSDHCPISIDYD 303
                +  SDH  +   ++
Sbjct: 485 GHPLDEWTSDHSAVMTLFN 503


>gi|84687505|ref|ZP_01015382.1| possible endonuclease/exonuclease/phosphatase family protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84664530|gb|EAQ11017.1| possible endonuclease/exonuclease/phosphatase family protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 403

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/389 (10%), Positives = 86/389 (22%), Gaps = 117/389 (30%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNS--VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  L S+N+  L   +       S   +        +     +LDAD++  QE+     +
Sbjct: 2   EFTLASFNVKNLIGPDKEYYEFQSYTPEEYGWKRDWMASQLVDLDADVIGFQEIFEEEPL 61

Query: 81  AKV-------------------------------FPKNTWCIFYSTERLINHSKRDSNND 109
            +V                                    +              R     
Sbjct: 62  REVIAEASDRARTLNDAVIPSKGKAYHRKVIFRKLGVEPYDDAALAFAPNAADTRQPG-K 120

Query: 110 IHTAIAVRKKNVRVLQQSYP-------------------LLGAKDSFSRAGNRRAVELLV 150
               +AV  +   V +                        L A     R  +R  +++ +
Sbjct: 121 RRPGVAVLSRFGFVGEPEVIQDFATPLTIPFQPLRGLDGDLDAGAFTLRRLSRPILKVRI 180

Query: 151 EINGKKIWVLDIHLKSF--------------------CFLDSLENTYSPSCSLLSQQAQW 190
            +  + I + + HLKS                                 +      +A  
Sbjct: 181 PVGDQVITLFNCHLKSKLGEFIRPEGADFAPEEDLVHYDPVGRAMGSMRAAVRRMAEAWV 240

Query: 191 LKDWITQKKESLVPFVIAGDFNRKIN---------YLGNNDDFWKTIDPNDSLIRFPKEK 241
           L+  I  +     P  + GDFN   +          +   +  W      +S       +
Sbjct: 241 LRREIVAELAKGHPVAVMGDFNDGEHAVSSEIVSGEVPFRNYQWMLRHDAESYSDRYSAE 300

Query: 242 DSRC--------------------------NANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
           ++                                       ID   + ++ +    +   
Sbjct: 301 EAATIKEQVERNRLHAAEGLFVRKSLRDMVYTTAFAGVFESIDQIYLSRHFHPDYDKRIA 360

Query: 276 SEILYNEDDIK---------SRGKRLSDH 295
               ++  +              K  SDH
Sbjct: 361 DMEYFSVLNDHITDGSHPEAPYNKLASDH 389


>gi|46108350|ref|XP_381233.1| hypothetical protein FG01057.1 [Gibberella zeae PH-1]
          Length = 476

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 74/293 (25%), Gaps = 31/293 (10%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + S    + L++ N   L       +      R       +          IV LQE  +
Sbjct: 24  SQSAPSNINLLTLNCWGLR-----YISTQRNARLDEIGRRIAHAVPT--PQIVALQECFT 76

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                     +   I + T +++ + K   +      +A+              +     
Sbjct: 77  QE--------DYEAIRHHTRQILPYGKFYHSGAFGGGLAILSHWPIEEIAQSWEMS--KL 126

Query: 137 FSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
              A  R  + + + + N   + +    +     +  +     P  S        L    
Sbjct: 127 LRGAAERGHLVVGMGDFNMFPLSIYHRVITGNAPVRDVWRILHPDSS--------LGPAY 178

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
              ++     +   DFN   N + +N  +       +   R  K +      +       
Sbjct: 179 HPSEKDRHRPLPTADFNLLENGVTSNSVYNTWRWNKNQQNRLTKGEICEVPPDTIDPRGQ 238

Query: 256 PIDYFVMD-----QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +DY             K       +  +   +        LSDH  +     
Sbjct: 239 RLDYIFASTGVDPDAPAKTPGWVVKTAHVSMTERHPDLLCSLSDHFAVQATLT 291


>gi|149173866|ref|ZP_01852495.1| hypothetical protein PM8797T_05495 [Planctomyces maris DSM 8797]
 gi|148847396|gb|EDL61730.1| hypothetical protein PM8797T_05495 [Planctomyces maris DSM 8797]
          Length = 339

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 60/245 (24%), Gaps = 43/245 (17%)

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
               +    D++ +QE      + +V                     +S        ++ 
Sbjct: 131 VAALEQWQPDLILIQETPGAGTLREVGQTIL--------------GENSGLLAGVDASIL 176

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
            +       S           + G    V          + +     ++  +       Y
Sbjct: 177 SRTPLEPVASSVNYTIGKVRVKTGQEVLVV--------SLRLTPPPFRADLWNPECWRAY 228

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                    + Q L   +++   + +P ++ GDFN         D  ++ + P +    F
Sbjct: 229 RDQRIHQRDELQQLSRRLSE-LPTDLPVIVGGDFNVNP-----RDPIFREL-PANLRDAF 281

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                   N   N    + ID    D       +    SE                DH  
Sbjct: 282 TSAGVGWGNTITNEAPFLRIDQVWCDTRFQPLRVIAELSEDT--------------DHRS 327

Query: 298 ISIDY 302
           +  D 
Sbjct: 328 VIADL 332


>gi|86140659|ref|ZP_01059218.1| hypothetical protein MED217_15945 [Leeuwenhoekiella blandensis
           MED217]
 gi|85832601|gb|EAQ51050.1| hypothetical protein MED217_15945 [Leeuwenhoekiella blandensis
           MED217]
          Length = 351

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/254 (9%), Positives = 61/254 (24%), Gaps = 43/254 (16%)

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
           +T  +Y  L +       D++ + E               W            +      
Sbjct: 108 QTNREYHKLIEQVNLHQPDLLLVMETD-----------KGWENGLKELEEDYPNVVRVPL 156

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
           D    + +  K      Q   L+                 +       + ++ +H     
Sbjct: 157 DNFYGMHLYSKYELSETQVNYLVE-------KDVPSIFTKVHHGGATPVELICVHPAPPS 209

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
             ++  +    +  L+  +A  + +          P ++ GD N  +    +    +  +
Sbjct: 210 PTENETSEERDAELLIVGKAVRVLE-------DNHPIIVCGDLNDVVWSRVSR--LFAKV 260

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                +                   + PID+                       D ++  
Sbjct: 261 T--GLIDPRIGRGLFPTFHADYWYLRFPIDHLFHS--------------TNVTVDTMQRL 304

Query: 289 GKRLSDHCPISIDY 302
               SDH P+   +
Sbjct: 305 PNIGSDHYPMFFTF 318


>gi|330976905|gb|EGH76930.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 194

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 28/83 (33%), Gaps = 17/83 (20%)

Query: 11  FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53
                C  +V        Q +++++WNI  L+                  + + +    +
Sbjct: 52  LLTASCNPAVEAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYN 111

Query: 54  YTLLRQYAKNLDADIVFLQEMGS 76
              + +  ++   D+V LQ +  
Sbjct: 112 LDEVARVIRDEQPDVVLLQGVDD 134


>gi|260662786|ref|ZP_05863680.1| metal-dependent hydrolase [Lactobacillus fermentum 28-3-CHN]
 gi|260552867|gb|EEX25866.1| metal-dependent hydrolase [Lactobacillus fermentum 28-3-CHN]
          Length = 290

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 85/281 (30%), Gaps = 52/281 (18%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYST 95
           D   + +  +   AD +  QE+ + +  +K                 VF  N    F   
Sbjct: 28  DTKGVERVMQAQQADFMLFQEIDTNSTRSKHVNQVRMVENKFHGYGHVFANNFHSAFLMW 87

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NG 154
                H    S          R       ++ YP+  +  S     +R      + + NG
Sbjct: 88  PLTDPHGSVQSGLLT----LSRYHIGSATRRQYPVTNSFISKFTDLDRCFAVTTIPVTNG 143

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           K++ +++          S  + Y     +   Q + L   I +   +    ++ GD+N  
Sbjct: 144 KQLLLIN----------SHMSAYDKGGKMRKAQMKLLNAVIERAYLASNYVIVGGDYNHA 193

Query: 215 I------------NYLGNNDDFWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYFV 261
           +                      +++      +   + +++     + +L  +  ++Y  
Sbjct: 194 LGKDMLTHFASQEKVPDWVSVLDQSMVAKGFTMVKAQNRETVPTVRSTDLAYRSGVNYLT 253

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +       L+  + +    N +          DH P+ + +
Sbjct: 254 VCDGF---LVSNNVTATATNINTDFDYA----DHNPVKLTF 287


>gi|238799158|ref|ZP_04642611.1| hypothetical protein ymoll0001_39810 [Yersinia mollaretii ATCC
           43969]
 gi|238716999|gb|EEQ08862.1| hypothetical protein ymoll0001_39810 [Yersinia mollaretii ATCC
           43969]
          Length = 253

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 93/296 (31%), Gaps = 73/296 (24%)

Query: 14  VPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +P  A +     +R++ WNI                K+  +++  + +     DA ++ L
Sbjct: 24  LPPGAPLPTSEFLRVMVWNIF---------------KQQRAEWLSVLKEFGR-DAQLMLL 67

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE  +   + +                     + ++     A+      V  L  ++P+ 
Sbjct: 68  QEAQTTPELVRFA---------------TSHYQAADQVPAFALPQHPSGVMTLAATHPVY 112

Query: 132 GAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                      R +   LV +    +G+ + V++IH  +F     + +           Q
Sbjct: 113 CCPLREREPLLRLSKSALVTVYPIHDGRLLMVVNIHAVNFSLGVDVYSK----------Q 162

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + + + I   +    P ++AGDFN       N    +      D +      +      
Sbjct: 163 LEPIGEQIAMHRG---PVILAGDFNAWSRQRVNALQRFAQNSGLDEVKFRTDLR------ 213

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +     P+D+    +                   D      R SDH P+ ++++
Sbjct: 214 --SRAFGRPLDFVFYRE---------------LTLADASVLVTRASDHNPLLVEFE 252


>gi|321461027|gb|EFX72063.1| hypothetical protein DAPPUDRAFT_111147 [Daphnia pulex]
          Length = 448

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 72/288 (25%), Gaps = 74/288 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++++ WN   L                 +     R+  ++++  IVFL E        
Sbjct: 4   HPIKILQWNARGLF---------------RAKLQEFRENLRSVNPLIVFLSET------- 41

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                  W   Y+ +    +S   +       +A+  K                +     
Sbjct: 42  ------HWKNEYTIKFSAYNSYLLNRPSQGGGVAILVKKAIQTN--------ILTLPNLP 87

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           N  AV + V++N   I ++ ++  +    +  E                           
Sbjct: 88  NLEAVGVSVKLNDSFIDLISVYCPNGNQCNDQEINLL-------------------FNTP 128

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWK------TIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
               +I GDFN       +                 D        ++     N    +  
Sbjct: 129 RNKAIIGGDFNSHSEVSDDFHTTNSCGRKISEFLLTDPNWTLSTPRNLNTRPNSRDYSSS 188

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ID      +                   I +     SDH P+ ID D
Sbjct: 189 TIDLTFTTSDLSPLT-------------SIHTGPYWSSDHLPVIIDID 223


>gi|291390379|ref|XP_002711682.1| PREDICTED: neutral sphingomyelin phosphodiesterase 3 [Oryctolagus
           cuniculus]
          Length = 657

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/303 (10%), Positives = 77/303 (25%), Gaps = 75/303 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A AK+  +    +        +           +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAAAKLKDQLHGYFEYILYDVGVYGCHGCCGFKFLNSGLFFASRYPV 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y        F    ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNGRGFDNLASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPP----EDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +  +Q   L+DW+ + ++S                V+ GD N                  
Sbjct: 471 VRCEQLDLLQDWLAEFRKSTSSSSTANPEELVAFDVVCGDLNFDNCSSDDKLEQQHALFT 530

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSR----------------CNANKNL 251
                              T+   + L                             +K+ 
Sbjct: 531 RYKDPCRLGPGEEKPWAIGTLLDINGLYDEDACTPDNLQKVLESEEGRREYLAFPTSKSP 590

Query: 252 RNKI------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                            IDY +  ++      +    E  +           L+DH P++
Sbjct: 591 GGGQKGRKDLLKGSGRRIDYMLHAEDGLGPDWKAEVEEFSFITQL-----SGLTDHLPVA 645

Query: 300 IDY 302
           +  
Sbjct: 646 MRL 648


>gi|306823685|ref|ZP_07457060.1| endonuclease/exonuclease/phosphatase [Bifidobacterium dentium ATCC
           27679]
 gi|309802933|ref|ZP_07697034.1| endonuclease/exonuclease/phosphatase family protein
           [Bifidobacterium dentium JCVIHMP022]
 gi|304553392|gb|EFM41304.1| endonuclease/exonuclease/phosphatase [Bifidobacterium dentium ATCC
           27679]
 gi|308220400|gb|EFO76711.1| endonuclease/exonuclease/phosphatase family protein
           [Bifidobacterium dentium JCVIHMP022]
          Length = 347

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/283 (10%), Positives = 70/283 (24%), Gaps = 59/283 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            + R+++ N                     ++   + +  K  D  ++ LQE+       
Sbjct: 121 GQFRVMTLNCRF----------------GRANAAAIVEAVKRYDIAVLALQELTENLIAE 164

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                          R +   K  S+N     + +R +                      
Sbjct: 165 LDAAGL---ADLLPYRQLGEVKE-SDNGGFNGVWIRVEPSDAS----------------- 203

Query: 142 NRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               V +++       +      ++S  F  +   +    C   S     L  +    + 
Sbjct: 204 ---PVTVVIPAADVPGLCFPIDSMRSITFASAHPKSPMRGCRDWSAGIIGLGAF-ATTQN 259

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                V+ GD N   ++                +    +        +     +I +D+ 
Sbjct: 260 QGDITVVMGDLNSGTDHPSFRKLMRLGFKDAALVEAKGRRA---TFPSWLPWPRIILDHV 316

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +                   +  D++S     SDH  ++    
Sbjct: 317 LFTSGL--------------DASDVRSFTVEGSDHLALAATLT 345


>gi|294787391|ref|ZP_06752644.1| endonuclease/exonuclease/phosphatase family protein [Parascardovia
           denticolens F0305]
 gi|294484747|gb|EFG32382.1| endonuclease/exonuclease/phosphatase family protein [Parascardovia
           denticolens F0305]
          Length = 342

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/248 (9%), Positives = 62/248 (25%), Gaps = 39/248 (15%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A     V +++ N                     +D + +    +    D++ +QE+  
Sbjct: 102 AAGQTASVTVMTLNGRY----------------GRADASSIVHAVEQNHVDVLCMQEV-- 143

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                 +  +       +        +   N++     A+  +   V      L  A  +
Sbjct: 144 ---TEDLVKRLDQDGLTARLPYSQLGESGENDNGGF-NAIWTRQAPVESHPASLPIASSN 199

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                        + +  + +     H  S             S          L + + 
Sbjct: 200 VPT--------ATIFVGNQPVLFASAHPMSPGRGGQAWQQSLSSLGAFG----RLNNPLL 247

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             +  +   V+ GD N  +++    D     +  +   +    +  +             
Sbjct: 248 ANRTQVTSQVVMGDLNSNLHHTALRDVLKAGLTDSGYQL---HKGMNLSFPASWPLFPAL 304

Query: 257 --IDYFVM 262
             ID+ + 
Sbjct: 305 IEIDHVLY 312


>gi|325982494|ref|YP_004294896.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
 gi|325532013|gb|ADZ26734.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
          Length = 364

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/281 (8%), Positives = 68/281 (24%), Gaps = 61/281 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++++ N+                  T  +   L    +    DI+   E   +    
Sbjct: 99  GRIKIITANVLM----------------TNQNAQGLIALIRECQPDILVTLESDIWWQTQ 142

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
               +  +           +                      +   +P++  +  +    
Sbjct: 143 LDILEIDYPYTIKCPLDNLYGMH-------------------VYSRFPMMNTQIEYLVEP 183

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           ++ ++  LV +       +     +         +              L        ++
Sbjct: 184 DKPSMHALVLLPSGHKVRIHFLHPAPPSPTENSESSERD--------AELVIIAKSVADT 235

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            VP ++ GD N            ++ I     L                   + P+D+  
Sbjct: 236 DVPVIVTGDLNDVAWSATTR--LFRKIS--GLLDPRVGRGMFNTFHANYWFLRWPLDHLF 291

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ++              ++  ++K      SDH  +  + 
Sbjct: 292 HSKH--------------FSLQNLKRLRSFGSDHYALFTEL 318


>gi|149467989|ref|XP_001514294.1| PREDICTED: similar to synaptojanin 1 [Ornithorhynchus anatinus]
          Length = 1821

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/343 (12%), Positives = 92/343 (26%), Gaps = 67/343 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-----DI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 573 SKPRKIRVCAGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGVQEFQDQRSKPTDIFAI 632

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W          ++      ++    +     +R ++ 
Sbjct: 633 GFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 692

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 693 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 746

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +           GDFN +I+                     D   
Sbjct: 747 EDFGEIARKLTFPMGRMLFCHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 806

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 807 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSA 866

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISI 300
                       ES     +    +   G+   ++SDH P+  
Sbjct: 867 EDLDLLNAGFQDESKILYTWTPGTLLHYGRAELKISDHRPVVA 909


>gi|120436324|ref|YP_862010.1| hypothetical protein GFO_1978 [Gramella forsetii KT0803]
 gi|117578474|emb|CAL66943.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803]
          Length = 370

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 59/253 (23%), Gaps = 45/253 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L         DI+   E               W    S       +      D  
Sbjct: 116 KRSDKLISLVNEKKPDILLTLESDKR-----------WEDELSVLEKDYKNTVKIPKDNL 164

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K      +   L+                 ++  NGKK+    +H       +
Sbjct: 165 YGMHLYSKLELKEVKVRYLVQEDIPSIHGF-------VILRNGKKVRFHCLHPMPPSPTE 217

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           S  +T   +          L              ++ GD N            ++ +   
Sbjct: 218 SDTSTNRDA---------ELLMLGRDVDVEKDSILVFGDLNDVAWSRTTR--LFQKLS-- 264

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +             +K    + P+D+    ++              +   DI      
Sbjct: 265 GLMDPRIGRGFFNTFHSKYFLLRWPLDHVFHTKD--------------FTLVDIAREKNV 310

Query: 292 LSDHCPISIDYDF 304
            SDH P+ I  ++
Sbjct: 311 GSDHFPMYIKLNY 323


>gi|224044113|ref|XP_002186853.1| PREDICTED: synaptojanin 1 [Taeniopygia guttata]
          Length = 1276

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           +  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 AKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIPEFQDHKNKPVDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W          ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + ++ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEISRKLGFPMGRMLFSHDYIFWCGDFNYRIDLPNEEVKDLIRQQNWDTLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       +S     +N   +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFHSDSHVPYTWNPGTLLHYGRAELKTSDHRPVVALID 867


>gi|222084602|ref|YP_002543131.1| hypothetical protein Arad_0546 [Agrobacterium radiobacter K84]
 gi|221722050|gb|ACM25206.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 331

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 84/295 (28%), Gaps = 31/295 (10%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL---DADIVFLQEMG 75
            +A    + +WN+         +    +        + + +        D       E+G
Sbjct: 54  PLAFPFTVAAWNLERCLFPIESAAKLKATDAPLVLLSEMDEGMARTGQGDPTATIAGELG 113

Query: 76  SYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
              A  V  +       I  S  +   + K    N +  + A++   +  L         
Sbjct: 114 MNYACGVEFLELSLGSEIERSFCKDNFNEKGFHGNALMASTALKDVFLFRLPGEAVWFKD 173

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            +   R G R A+  +VE        + +HL+S               +   +Q   L  
Sbjct: 174 SNEQPRVGERCAIGAVVETEAGPFVAVSVHLESVAT-----------VAYRERQMAALIT 222

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            +       +P +I GD N   +  G+   D  +   +             +    +   
Sbjct: 223 AVEAYAP-GLPILIGGDLNTGNHTGGDFRTDTLFAMAEGRGFECHGGPLDQTSTRPSLIT 281

Query: 252 RNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           R       +D+  + +               Y    + + GK LSDH  I    +
Sbjct: 282 RFPDRTMKLDW-FLSRGLKIG--------ESYLVSSLDADGKPLSDHDMIVCTIE 327


>gi|242007264|ref|XP_002424462.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus
           corporis]
 gi|212507862|gb|EEB11724.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus
           corporis]
          Length = 656

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 66/229 (28%), Gaps = 8/229 (3%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + +  ++  ADI+ LQE+ +     
Sbjct: 38  FTVMCYNVLCDKYATRQMYGYCPSWALDWEYRKKGILEEIRHYAADIISLQEVETDQFYN 97

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSYPLLGAKDSF 137
              P+     +       + +K  S ND       AI  R     + +            
Sbjct: 98  FFLPELKRDGYDGIFSPKSRAKTMSENDRKFVDGCAIFYRTAKFSLTKNHLVEFNQLAMA 157

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           +  G+   +  ++  +   +  L    ++          Y     +   Q +   ++   
Sbjct: 158 NSEGSDHMLNRVMPKDNIGLAALLKTKEAAWDNGEKSYRYRILTKMAGYQTKE--EYWAN 215

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           + +       + D N   +   N  D  +  +  +   +          
Sbjct: 216 QSQYNNYNYPSPDPNVGFHSELNFQDTSQYENVPNDSWQANYYTGEGYG 264



 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/181 (10%), Positives = 43/181 (23%), Gaps = 37/181 (20%)

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP-------FVIAGDFN 212
           + +      +     +       +LS + + + +  +                ++ GDFN
Sbjct: 460 ILVCTAHIHWDPEFCDVKLIQTMMLSYELKSILEEASHNFRPGHKPETNCVQLLLCGDFN 519

Query: 213 RKINYLGN-------------------NDDFWKTIDPNDSLIRFPKEKDSRC-------- 245
              +                            + I   +    F                
Sbjct: 520 SLPDSGVIEFLSSGRVSADHPDFKELQYKSVLQKISGCEKPNEFTHSFKLASAYSEDIMP 579

Query: 246 NANKNLRNKIPIDYFVMDQNA---YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             N     K  IDY    + +      L   +   +  N+          SDH P+ ++ 
Sbjct: 580 FTNYTFEFKGIIDYIFYSKQSMTPLGLLGPVNADWLKENKVVGCPHPHVPSDHFPLLVEL 639

Query: 303 D 303
           +
Sbjct: 640 E 640


>gi|148645276|gb|ABR01162.1| endonuclease/reverse transcriptase [Sus scrofa]
          Length = 1272

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/250 (11%), Positives = 66/250 (26%), Gaps = 61/250 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ N+N L+                     + ++ K     I  LQE         +
Sbjct: 7   LSIITLNVNGLNAP--------------IKRHRVAEWIKRQKPSICCLQE-------THL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K+T+ +              + +D    +A        L         KD        
Sbjct: 46  RTKDTYRLKVKGW---GKVFHANRHDRKAGVA-------TLISDKIDFKTKDIKKDKEGH 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I G+ + +++I+  +                   +  Q +   I    +   
Sbjct: 96  Y-LMIKGSIQGEDVTIINIYAPNIGAP---------------RYIQQILTDIKGDIDENT 139

Query: 204 PFVIAGDFNRKINY------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             +I GD N  +                   +  + +D  D       +K      +   
Sbjct: 140 --IIVGDLNTPLTSMDRSSRQKTNKATEILKETIEKLDLIDIFRTLHPKKSEYTFFSNAH 197

Query: 252 RNKIPIDYFV 261
                ID+ +
Sbjct: 198 GTFSRIDHIL 207


>gi|115388908|ref|XP_001211959.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114194355|gb|EAU36055.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1203

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/328 (11%), Positives = 94/328 (28%), Gaps = 51/328 (15%)

Query: 19  SVAQKVRL--VSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQY-AKNLDADIVFLQE 73
           S  + +++   ++N+    L     +SLW         D   +     + +    +  Q+
Sbjct: 604 SFTRTIKIWTGTFNVNGRHLGADVDLSLWLWPSLDEQDDIPAIVAVGFQEIVP--LSPQQ 661

Query: 74  MGSYNAVAKVFPK----NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           + S +   +   +    N    + +      +    S   + TA+ +  +   +      
Sbjct: 662 IMSTDPTTRKVWEVAVKNCLNNYAAARGTAKYILLRSGQLVGTALMIFVREEALNYIKNV 721

Query: 130 LLGAKDSF--SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
               K +     AGN+    +  + +  ++  +  HL +        N    + S     
Sbjct: 722 EGSVKKTGLSGMAGNKGGCAIRFDYSSTRLCFVTAHLAAGFGNYEERNRDYETISHG--- 778

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYL----------------GNNDDFWKTIDPN 231
              L+    +        +  GDFN +I                    +ND     +   
Sbjct: 779 ---LRFQKNRSIADHDAIIWLGDFNYRIGRDNQTVRDLVARKDFQKLYDNDQLNLGMLKG 835

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPID--YFVMDQNA--------------YKFLIQESF 275
            +   + +   +     K    +   D  Y +   N                 +  +  +
Sbjct: 836 WTFQFYTEGTITFPPTYKYDVGRDEYDTSYDITLPNFDGDQLTTHREKARIPAWCDRILW 895

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 + + ++   R SDH P+   + 
Sbjct: 896 RGSGLQQTNYQAANLRFSDHRPVWATFS 923


>gi|330722221|gb|EGH00109.1| hypothetical protein imdm_2161 [gamma proteobacterium IMCC2047]
          Length = 361

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/285 (7%), Positives = 61/285 (21%), Gaps = 61/285 (21%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            A   ++++ N+                  +      L    ++   DI+   E   +  
Sbjct: 100 AAHNFKIMTANVLM----------------SNRQADKLINQVQHYQPDILVTLETDHWWQ 143

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                 ++ +  +       N       + +        +   +++   P +  +     
Sbjct: 144 QQLDQLQSAYP-YSIKCPQDNLYGMHVYSRLE---LNESEIKYLVEADIPSMHTQ----- 194

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                   + ++                   +                   L        
Sbjct: 195 --------IKLDCGANVYTHFLHPAPPSPVENDKSTERD----------AELLAVAKTIT 236

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           E   P ++ GD N            ++ I     L                   + P+D+
Sbjct: 237 EHNHPIIVTGDLNDVAWSKTTR--LFRKIS--GLLDPRIGRGMFNTFHASYPFMRWPLDH 292

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
               ++              +    I+      SDH  +     +
Sbjct: 293 LFHSKH--------------FRLQHIERLYIAGSDHFALLACLSY 323


>gi|119025228|ref|YP_909073.1| hypothetical protein BAD_0210 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118764812|dbj|BAF38991.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 344

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/286 (9%), Positives = 72/286 (25%), Gaps = 57/286 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+   + R+++ N                     ++   +    K  D  ++ LQE+   
Sbjct: 114 AAKHGRFRVMTLNCRY----------------GRANAAAIVSAVKEHDVAVLALQELTD- 156

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                V   +   +            +D++N     I +R         + P+     + 
Sbjct: 157 ---DLVAALDEAGLSDLLPYRQLGENKDTDNGGFNGIWIR----IEPSDTSPITAVIPAA 209

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              G    ++ +     + I  +  H KS        +                   +  
Sbjct: 210 DVPGVCFPIDAM-----RGITFVSAHPKSPMRGCRDWSAGIIGLGE-----------LAT 253

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            ++     V+ GD N   ++                     +        +     ++ +
Sbjct: 254 SQKQGDITVVLGDLNSGTDHPSFRKLLDAGFQDAALTEAKGRRA---TFPSWLPWPRLIL 310

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+ +                      D++S     +DH  ++    
Sbjct: 311 DHILFTAGLTAS--------------DVRSFTVNGTDHLALAATLT 342


>gi|91218119|ref|ZP_01255069.1| hypothetical protein P700755_13765 [Psychroflexus torquis ATCC
           700755]
 gi|91183763|gb|EAS70156.1| hypothetical protein P700755_13765 [Psychroflexus torquis ATCC
           700755]
          Length = 182

 Score = 52.6 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 58/214 (27%), Gaps = 39/214 (18%)

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             W       +     K+      +  IA+  K           + +   +    N+ ++
Sbjct: 5   PEWESLIMPIQKNYPYKKFVARADNFGIALLSKFE---------MNSSIDYFELNNKPSI 55

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
              ++I  +   ++  H        + EN             + L + + ++       +
Sbjct: 56  RAELKIENECFTLIATHPMPPMSQSAFENRN-----------KQLLNIVDKRSNFSENLI 104

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266
           + GDFN            ++ +   +                     +  +D+ ++ +N 
Sbjct: 105 VVGDFNTSSFSNH-----FRALVEGNLKDSRIGFGLLPTWPASFGVLQTTLDHCLVSKNL 159

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                            D        SDH PISI
Sbjct: 160 IVL--------------DRSVGENIGSDHLPISI 179


>gi|225464836|ref|XP_002272323.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1140

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/289 (10%), Positives = 83/289 (28%), Gaps = 65/289 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+ +R++SWN+   ++               S   +++   ++   D++ LQE     ++
Sbjct: 2   AKSLRILSWNVRGANDS--------------SKRRIIKAVIRSQRVDLLCLQETK-IQSL 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           ++   ++     +S    ++             + V      +      +          
Sbjct: 47  SEGLVRSLGAGRWSKWVALDAVGSAG------GMLVCWDKRSLEVMETEV---------- 90

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             + +V          +      +         E  +    ++                 
Sbjct: 91  -GKFSVSCRFRNVENGLTWFFTGVYGPFSKGDRECLWEELGAIRGLW------------- 136

Query: 201 SLVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
               + + GDFN  ++    N           F +T+D  + +    +      +  ++ 
Sbjct: 137 -EDLWCLGGDFNVILSQRERNRQGRLTGAMRIFAQTVDELELMDLPMQGGAFTWSGGRDN 195

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++   +D F++ Q   +     +   +               DH PI +
Sbjct: 196 QSWARLDRFLVTQQWLEMFSGVAQCRLQRPTF----------DHFPILL 234


>gi|307194526|gb|EFN76818.1| Synaptojanin-1 [Harpegnathos saltator]
          Length = 1172

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/325 (10%), Positives = 75/325 (23%), Gaps = 51/325 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWK----NSVKRTTSDYTLLRQYAKNLDADI----VFLQEMG 75
           V + ++N+N       V        + +         L    +  D  +    +  +E+ 
Sbjct: 532 VSVGTYNVNGGKHFRSVVYKDVSLSDWLLDGPRKSPSLVTLEQRDDVPVDIFAIGFEEIV 591

Query: 76  SYNAVAKVFPKNTWCIFYSTERLI-----NHSKRDSNNDIHTAI----AVRKKNVRVLQQ 126
             NA   +   +     ++ E        N             +     +R ++   L+ 
Sbjct: 592 DLNASNIMAASSDNAKAWAEELQKVLSKDNTEYVLVTYQQLVGVCLYLFIRPEHAPYLRD 651

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                         GN+ A  +   +       +  H  +     +  N      +    
Sbjct: 652 VAVDCVKTGLGGATGNKGAAAIRCVLYSTSFCFVCAHFAAGQSQVNERNADYAEITRK-- 709

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDP 230
               +   + +   +       GDFN +++   +                 D      D 
Sbjct: 710 ----ITFPMGRTLNTHDYVFWCGDFNYRVDMDKDEMKELIKRNELDQILAYDQLRVQQDQ 765

Query: 231 NDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQESFSEI 278
            +    F +   +     K                    D  +  +      I       
Sbjct: 766 GNVFKNFLEGPITFAPTYKYDLFSDDYDTSEKCRQPAWTDRVLWKRRKQVPDIDSPTDWN 825

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
                       + SDH P+    D
Sbjct: 826 PGRLVYYGRAELKQSDHRPVIATID 850


>gi|238883835|gb|EEQ47473.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 891

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 90/304 (29%), Gaps = 51/304 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87
           ++N+N    +  +  W        +DY L+           + LQE+   NA   V    
Sbjct: 594 TFNVNGSVYEGDIDKWIYPE---ENDYDLI----------FIGLQEIVVLNAGQMVNTDF 640

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGAKDSFSR 139
                +  + L    KR+    + +           V++  V+ +               
Sbjct: 641 RNKTQWERKILSVLQKRNKYMVMWSGQLGGVALYFFVKESQVKYVSNVECSFKKTGLGGV 700

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           + N+  + +  + +   I  +  HL +        +    +        + ++    ++ 
Sbjct: 701 SANKGGIAVSFKFSDTTICFVSAHLAAGLSNIEERHQNYKAL------IKGIQFSKNRRI 754

Query: 200 ESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKDS 243
           ++    +  GDFN +I+   +                 D   K +   +S   F +++ +
Sbjct: 755 QNHDAVIWLGDFNYRIDMTNDQVKPMILQKLYAKIFECDQLNKQMANGESFPFFSEQEIN 814

Query: 244 RCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                K  +     D                ++  S   ++        +    SDH P+
Sbjct: 815 FPPTYKFDKGTKVYDTSEKQRI---PAWTDRILFLSRQNLIEPLSYNSCQNLTFSDHRPV 871

Query: 299 SIDY 302
              +
Sbjct: 872 YATF 875


>gi|171741398|ref|ZP_02917205.1| hypothetical protein BIFDEN_00481 [Bifidobacterium dentium ATCC
           27678]
 gi|283455253|ref|YP_003359817.1| hypothetical protein BDP_0313 [Bifidobacterium dentium Bd1]
 gi|171277012|gb|EDT44673.1| hypothetical protein BIFDEN_00481 [Bifidobacterium dentium ATCC
           27678]
 gi|283101887|gb|ADB08993.1| Conserved hypothetical membrane spanning protein [Bifidobacterium
           dentium Bd1]
          Length = 347

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/283 (10%), Positives = 70/283 (24%), Gaps = 59/283 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            + R+++ N                     ++   + +  K  D  ++ LQE+       
Sbjct: 121 GQFRVMTLNCRF----------------GRANAAAIVEAVKRYDIAVLALQELTENLIAE 164

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                          R +   K  S+N     + +R +                      
Sbjct: 165 LDAAGL---ADLLPYRQLGEVKE-SDNGGFNGVWIRVEPSDAS----------------- 203

Query: 142 NRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               V +++       +      ++S  F  +   +    C   S     L  +    + 
Sbjct: 204 ---PVTVVIPAADVPGLCFPIDSMRSITFASAHPKSPMRGCRDWSAGIIGLGAF-ATTQN 259

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                V+ GD N   ++                +    +        +     +I +D+ 
Sbjct: 260 QGDITVVMGDLNSGTDHPSFRKLMRLGFKDAALVEAKGRRA---TFPSWLPWPRIILDHV 316

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +                   +  D++S     SDH  ++    
Sbjct: 317 LFTSGL--------------DASDVRSFTVEGSDHLALAATLT 345


>gi|156362334|ref|XP_001625734.1| predicted protein [Nematostella vectensis]
 gi|156212580|gb|EDO33634.1| predicted protein [Nematostella vectensis]
          Length = 319

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 89/297 (29%), Gaps = 51/297 (17%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            T+   + V L++ NI    E            +T      + +   ++   I+  QE+ 
Sbjct: 38  PTSQPNRGVSLLTLNI-WFGEY-----------QTRERMVAIGRAVDSIKPGIIAFQEVT 85

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             N    +     W   Y+     N +K D        + +  K   +  ++ P   ++ 
Sbjct: 86  FRNLA--LLKTQDWFKRYTLLLDENSTKLDPYF-----VVLLTKFKVLNWRNIPFATSR- 137

Query: 136 SFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                  R  +   ++IN   + + V      +   L+S++ +       L+   + L  
Sbjct: 138 -----MGRSLLLAQLQINTIDENVQVSIPFTIATSHLESMDYSSKEREKQLAFSLKMLAG 192

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           +            + GD N +    G+        D   +++   +      N   N   
Sbjct: 193 FAD--------VCLMGDLNLEPKVDGDILLPLPWFDAWLAILNHTESNGYTWNVGANPYA 244

Query: 254 K--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           K           D  +            +F+    +  +  + G   SDH  +  + 
Sbjct: 245 KISEPDVAENRFDRIIC--------KLSNFAVKSVDILESDNSGAYFSDHFALHAEL 293


>gi|147844782|emb|CAN79044.1| hypothetical protein VITISV_043757 [Vitis vinifera]
          Length = 1256

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/287 (10%), Positives = 72/287 (25%), Gaps = 65/287 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R++SWN+   ++               S   +++   ++   D+  +Q          
Sbjct: 536 TLRVLSWNVRGANDN--------------SKRKVIKAMIRSQRVDLFCIQGTKIQTMSEG 581

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V        F     +               I +      +      +     S      
Sbjct: 582 VVRSVGSGRFLDWGAMGAQGSTG-------GILICWDKRSLELLEMEVGQFSISCRLKNV 634

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +  +                                  + ++   ++          
Sbjct: 635 EDGLVWIFIGVYGPFT-------------------RKERESMWEELGAIRGIW------D 669

Query: 203 VPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            P+ + GDFN  ++    +           F + +D  + L    +      +  +N ++
Sbjct: 670 DPWCVGGDFNVTLSQRERSSQGSLNGAMRRFAQVVDDLELLDLPLQGVVFSWSEGRNNQS 729

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +D F++ Q+          S +              SDH PI +
Sbjct: 730 WARLDRFLVTQSWLDLFRGVVQSRLPRPT----------SDHFPILL 766


>gi|45185112|ref|NP_982829.1| ABL118Wp [Ashbya gossypii ATCC 10895]
 gi|44980748|gb|AAS50653.1| ABL118Wp [Ashbya gossypii ATCC 10895]
          Length = 504

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/210 (8%), Positives = 52/210 (24%), Gaps = 13/210 (6%)

Query: 24  VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            R++++N +     +  +     +  +      +L    +  + D++ LQE+      + 
Sbjct: 105 FRMMTYNCLAQALIRRKLFPTSGNALKWFKRSKVLLSELQYYNPDVICLQEIDHTQYKSF 164

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    + S                  ++  +     +          +   +    
Sbjct: 165 WMDALQHAGYCSKFHRSFGKNHGIAIVWRRSLFNKVDETLIDFDEEQSGEIERRTTTKNV 224

Query: 143 RRAVE------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ------W 190
              V       +     G     + +      +        +  C ++  + +       
Sbjct: 225 GLIVALEYTDEIKRRYPGSAQSGIVVGTSHLFWHPFGTYERARQCYIILSRMKVFLKRLR 284

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGN 220
           L +  +    S       GDFN +      
Sbjct: 285 LLERGSCGAASQWHPFFCGDFNSQPFDAPY 314


>gi|295134108|ref|YP_003584784.1| pyridoxal phosphate-dependent decarboxylase [Zunongwangia profunda
           SM-A87]
 gi|294982123|gb|ADF52588.1| pyridoxal phosphate-dependent decarboxylase [Zunongwangia profunda
           SM-A87]
          Length = 365

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/253 (10%), Positives = 57/253 (22%), Gaps = 45/253 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L    K    DI+   E               W                   D  
Sbjct: 116 KHPEKLVALVKKRQPDILLTLETDKR-----------WENVLEEIEDDYKYTIKVPLDNL 164

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K   +    + L+                + +  NG K+ +  +H       +
Sbjct: 165 YGMHLYSKLELIDADVHYLVQEDIPSIHG------YVKLR-NGTKLKIHCLHPMPPSPTE 217

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           S  +T   +          +              ++ GD N            ++ +   
Sbjct: 218 SYTSTNRDA---------EILMLGRDLSPEDRKVLVFGDLNDVAWSRTTK--LFQQMS-- 264

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             +                   + P+D+    ++              +   +I      
Sbjct: 265 GLMDPRIGRGFFNTFHTGYRLFRWPLDHVFHSKD--------------FTLIEIAREKSI 310

Query: 292 LSDHCPISIDYDF 304
            SDH P+ I  ++
Sbjct: 311 GSDHFPMYIKLNY 323


>gi|159125513|gb|EDP50630.1| transcription factor, putative [Aspergillus fumigatus A1163]
          Length = 598

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 73/270 (27%), Gaps = 51/270 (18%)

Query: 15  PCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             +     KV ++S+N    S   Q         V        L+    ++ D+DI+ LQ
Sbjct: 304 SSSNHRTDKVTVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILNELRSHDSDIICLQ 363

Query: 73  EMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           E+     +     ++   +   +++   R +   + D+      A   +     +L +  
Sbjct: 364 EIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKGSKFILLDKQL 423

Query: 129 PLLGAK-----------DSFSRAGNRRAVELLV----EINGKKIWVLDIHLKS------- 166
              G             D ++R   +  + ++V       G +  V++ HL         
Sbjct: 424 INFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGARFIVVNAHLYWDPAFKDV 483

Query: 167 -----------------------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                                   C   +            +   +     +       +
Sbjct: 484 KLIQTAILMEELTKLSETYAKWPPCTDKAAFRFSKEEGQSETPPLEEPAPSMQYASGDQI 543

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
           P ++ GD N        N      +D    
Sbjct: 544 PLLMCGDLNSSPGSAAYNLIAHGRLDEEHP 573


>gi|332227578|ref|XP_003262969.1| PREDICTED: sphingomyelin phosphodiesterase 3 [Nomascus leucogenys]
          Length = 655

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 82/301 (27%), Gaps = 73/301 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNN--------- 221
           +   Q   L+DW+   ++S                V+ GDFN       +          
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFT 530

Query: 222 -----------------------------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                                              D+  K ++  +    +     S+ +
Sbjct: 531 HYRDPCRLGPGEEKPWAIGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSS 590

Query: 247 ANKNL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             K        N   IDY +  +       +    E  +           L+DH P+++ 
Sbjct: 591 GQKGRKELLKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVAMR 645

Query: 302 Y 302
            
Sbjct: 646 L 646


>gi|158260325|dbj|BAF82340.1| unnamed protein product [Homo sapiens]
          Length = 655

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 82/301 (27%), Gaps = 73/301 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNN--------- 221
           +   Q   L+DW+   ++S                V+ GDFN       +          
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFT 530

Query: 222 -----------------------------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                                              D+  K ++  +    +     S+ +
Sbjct: 531 HYRDPCRLGPGEEKPWAIGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSS 590

Query: 247 ANKNL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             K        N   IDY +  +       +    E  +           L+DH P+++ 
Sbjct: 591 GQKGRKELLKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVAMR 645

Query: 302 Y 302
            
Sbjct: 646 L 646


>gi|116253417|ref|YP_769255.1| transmembrane exo/endo phosphatase protein [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258065|emb|CAK09165.1| putative transmembrane exo/endo phosphatase protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 318

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 60/244 (24%), Gaps = 56/244 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
            RL+S+NI             N    T      +       +AD+V L E       + +
Sbjct: 95  FRLMSFNI----------AIDNWKNSTE-----ITDMVIASNADVVNLLEAKPLTFHLQQ 139

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F    + I                        V  K   V +Q   +   + +      
Sbjct: 140 LFKAYPYHI------------GCDAGKDTCDTLVLSKRPFVSRQVASMGSLRKNR----- 182

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   V   G+ I ++  HL    F D               Q   L+D         
Sbjct: 183 --LVMASVSFGGETINLVSAHLTKPYFDD--------------FQMAELEDLGKALGSID 226

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V++GDFN             +               +            I ID+   
Sbjct: 227 GPLVLSGDFNSSAIAPSIQALLREQ-------KLKTITPEPATWPIGAGALGIAIDHIFA 279

Query: 263 DQNA 266
               
Sbjct: 280 RAPL 283


>gi|114663305|ref|XP_001167790.1| PREDICTED: sphingomyelin phosphodiesterase 3 [Pan troglodytes]
          Length = 655

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 82/301 (27%), Gaps = 73/301 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNN--------- 221
           +   Q   L+DW+   ++S                V+ GDFN       +          
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFT 530

Query: 222 -----------------------------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                                              D+  K ++  +    +     S+ +
Sbjct: 531 HYRDPCRLGPGEEKPWAIGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSS 590

Query: 247 ANKNL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             K        N   IDY +  +       +    E  +           L+DH P+++ 
Sbjct: 591 GQKGRKELLKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVAMR 645

Query: 302 Y 302
            
Sbjct: 646 L 646


>gi|8923946|ref|NP_061137.1| sphingomyelin phosphodiesterase 3 [Homo sapiens]
 gi|73921262|sp|Q9NY59|NSMA2_HUMAN RecName: Full=Sphingomyelin phosphodiesterase 3; AltName:
           Full=Neutral sphingomyelinase 2; Short=nSMase-2;
           Short=nSMase2; AltName: Full=Neutral sphingomyelinase II
 gi|8247250|emb|CAB92964.1| neutral sphingomyelinase II [Homo sapiens]
 gi|85567664|gb|AAI12239.1| Sphingomyelin phosphodiesterase 3, neutral membrane [Homo sapiens]
 gi|119603639|gb|EAW83233.1| sphingomyelin phosphodiesterase 3, neutral membrane (neutral
           sphingomyelinase II) [Homo sapiens]
 gi|313883242|gb|ADR83107.1| sphingomyelin phosphodiesterase 3, neutral membrane (neutral
           sphingomyelinase II) [synthetic construct]
          Length = 655

 Score = 52.6 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 82/301 (27%), Gaps = 73/301 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNN--------- 221
           +   Q   L+DW+   ++S                V+ GDFN       +          
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHSLFT 530

Query: 222 -----------------------------------DDFWKTIDPNDSLIRFPKEKDSRCN 246
                                              D+  K ++  +    +     S+ +
Sbjct: 531 HYRDPCRLGPGEEKPWAIGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSS 590

Query: 247 ANKNL-----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             K        N   IDY +  +       +    E  +           L+DH P+++ 
Sbjct: 591 GQKGRKELLKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVAMR 645

Query: 302 Y 302
            
Sbjct: 646 L 646


>gi|304393251|ref|ZP_07375179.1| YD repeat-containing protein [Ahrensia sp. R2A130]
 gi|303294258|gb|EFL88630.1| YD repeat-containing protein [Ahrensia sp. R2A130]
          Length = 413

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/250 (10%), Positives = 61/250 (24%), Gaps = 47/250 (18%)

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
           K+   +Y  L    + ++ D+    E               W             +    
Sbjct: 159 KQGNREYVRLCDLFQTVEPDLAIFMETDQK-----------WIDALDKVGASYPHRMACP 207

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
            D    + +  +     +++  LL  +           + L +E  G+ I ++ +H +  
Sbjct: 208 MDNAYGLLLYSRFPISEEETRFLLNDEVPSFH------LTLTLE-EGRDIRLIAVHPEPP 260

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
              D                   +       +    P ++ GD N             + 
Sbjct: 261 VVYDDTIGRD-----------AEIALVGQIVRNEDRPAMVTGDLNDVAWS----RTTRRF 305

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +  +  L              +    + P+D+                    +    +K 
Sbjct: 306 LRISGMLDPREGRGQFNTFDARYPFLRWPLDHIFHSPQ--------------FQLVSMKR 351

Query: 288 RGKRLSDHCP 297
                SDH P
Sbjct: 352 MPFVGSDHFP 361


>gi|114764758|ref|ZP_01443941.1| hypothetical protein 1100011001343_R2601_20516 [Pelagibaca
           bermudensis HTCC2601]
 gi|114542807|gb|EAU45829.1| hypothetical protein R2601_20516 [Roseovarius sp. HTCC2601]
          Length = 332

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 81/305 (26%), Gaps = 66/305 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-------Y 77
            + +WN+      EG +                    K  D D++ L EM          
Sbjct: 58  TVGAWNLERCLFPEGAAQ-------------------KMADCDLLLLSEMDHGMARTGQR 98

Query: 78  NAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVR----------KKNVRV 123
           N    +         + + +    L +  +     D H A+             + +  +
Sbjct: 99  NTTRDIAGGLGMAYAYAVEFLEMGLGSPIEHAFCEDDHNALGYHGNALMAKTDLRDHFAL 158

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                    +     R G R AV   V+     +  +  HL+S C               
Sbjct: 159 RLWGERQWFSDAEQPRLGERIAVGATVDTEAGPLLAISTHLESACGP-----------EH 207

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIRFPKEK 241
              Q + L   +       +P +I GD N   +  G+      +         +    E 
Sbjct: 208 REMQIRGLIAALDA-AFPGLPVLIGGDLNTGNHNDGDWRAERLFDAAREAGFTVHGGPED 266

Query: 242 DSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                 +   R       +D+F+      +     S          + + G+ LSDH  I
Sbjct: 267 QPTTRPSLITRWPERQMKLDWFLARNMRLEETEIRS---------SLDATGRPLSDHDAI 317

Query: 299 SIDYD 303
                
Sbjct: 318 VTRIT 322


>gi|242049194|ref|XP_002462341.1| hypothetical protein SORBIDRAFT_02g024070 [Sorghum bicolor]
 gi|241925718|gb|EER98862.1| hypothetical protein SORBIDRAFT_02g024070 [Sorghum bicolor]
          Length = 410

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 78/331 (23%), Gaps = 67/331 (20%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---- 83
           +WN+  ++  +G+ L      R               D  ++  QE+   NA   +    
Sbjct: 75  TWNVGGITPSDGLDLEDWLDTRA-----------NAYDIYVLGFQEIVPLNARNVLGPKK 123

Query: 84  -------------------------FPKNTWCIFYSTERLINHSKRDSNNDIHTA----I 114
                                      +++         +     R   +         +
Sbjct: 124 SCASAKWNSLIGEALNKKEREERAKLNQDSTNSGAKEGSMQGEGFRCIRSKQMVGIFTSV 183

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            VR     ++                GN+ +V +   ++      +  HL S      + 
Sbjct: 184 WVRSNLRPLIHHLDVSCIGSGIMGCLGNKGSVSIRFVLHETSFCFVCCHLASGGKQGDVL 243

Query: 175 NTYSP--SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------------- 219
                       +         + +K       V+ GD N +I+                
Sbjct: 244 LRNLDVADILTRTWFPGLASQELPEKILDHDQVVLLGDLNYRISLEEAETRSLVRAKNWA 303

Query: 220 ---NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES-- 274
               ND              + +   +     K   N     +      + K        
Sbjct: 304 ILLENDQLLFEFSTGRHFEGWQEGLITFSPTYKYQPNSDQYYWCFDSARSEKKRAPAWCD 363

Query: 275 ---FSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +      +   ++   RLSDH P+   +
Sbjct: 364 RILWRGKGLKQVQYETCSYRLSDHRPVRAVF 394


>gi|260831478|ref|XP_002610686.1| hypothetical protein BRAFLDRAFT_117919 [Branchiostoma floridae]
 gi|229296053|gb|EEN66696.1| hypothetical protein BRAFLDRAFT_117919 [Branchiostoma floridae]
          Length = 392

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/244 (11%), Positives = 63/244 (25%), Gaps = 24/244 (9%)

Query: 27  VSWNIN-----TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +S+N+        +    +                L Q  ++ + D++ LQE+   +   
Sbjct: 1   MSYNVLAQELLMANWYLYLDCADQEGLTWDVRKEKLLQQFQHYNVDVLCLQEVQESHYHD 60

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
              P+     +        + KR  +     A   R     +++          +     
Sbjct: 61  FFLPELQKLGY-----EGLYKKRTGDKPDGCATFYRTSKFSLVKHRLVEYFRPGTDVLDR 115

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +  A+ +L++        +  +L   C  ++          +   Q   L   I Q    
Sbjct: 116 DNVAIVVLLKPKTGSKQKMHANL---CIANTHLLFNKRRGDVKLSQLGVLLAEIDQLAFD 172

Query: 202 L-----------VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
                        P V+ GD N               +   D        + S       
Sbjct: 173 PKVRYWDAKVRCHPVVLCGDLNSAPFSPLYQFLNTGQLAYGDYERSEISGQSSPPRWRNW 232

Query: 251 LRNK 254
           ++  
Sbjct: 233 MQPP 236


>gi|198277395|ref|ZP_03209926.1| hypothetical protein BACPLE_03607 [Bacteroides plebeius DSM 17135]
 gi|198269893|gb|EDY94163.1| hypothetical protein BACPLE_03607 [Bacteroides plebeius DSM 17135]
          Length = 343

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/340 (8%), Positives = 67/340 (19%), Gaps = 78/340 (22%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
              +++++ WNI                      Y  +      L+ D V   E+ +Y+ 
Sbjct: 21  AQTELKVLQWNIWQEGTMVPGG------------YEAIVSEIARLEPDFVTFSEVRNYHQ 68

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                    +C    T          S     + +    K+      +            
Sbjct: 69  TR-------FCDRIVTSLREKGKTYYSFYSYDSGLL--SKHPITDSTTVFPEKNDHGSIY 119

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP------------SCSLLSQQ 187
                     + +    +  L     +    D       P              S     
Sbjct: 120 RMVASVNGQQIAVYTAHLDYLSDAYYNVRGYDGSTWKEIPIPETVQEVLAINDASQRDDA 179

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKIN------------------------------Y 217
            +       +        ++ GDFN   +                              +
Sbjct: 180 IREFVKAAKKDIAEGRMVILGGDFNEPSHLDWTRETKDLYDHNGLIVPWTVPLILDNNGF 239

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDYFVMDQNAYKFLIQES 274
                  +  +            +               +  IDY     +    L   +
Sbjct: 240 ADAYRTLYPNVLDYPGFTFPSDNEKVPTQKLTWAPKSDERDRIDYIFYYPHPQLELKNAA 299

Query: 275 F------------SEILYNEDDIKSRGKRLSDHCPISIDY 302
                         +    +  I+  G   +DH  + + +
Sbjct: 300 IFGPQGSIVKNQREKETSKDPFIEPLGTWPTDHKGVFVTF 339


>gi|21464474|gb|AAM52040.1| SD04710p [Drosophila melanogaster]
          Length = 959

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 90/329 (27%), Gaps = 59/329 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ---YAKNLDA--------DI--VFLQ 72
           + ++N+    +     ++K+S+     D   L +        +         DI  +  +
Sbjct: 283 VGTYNV-NGGKHFRSIVFKDSLADWLLDCHALARSKALVDVNNPSENVDHPVDIYAIGFE 341

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVL 124
           E+   NA   +         ++ E     S+ +    +           I +R ++   +
Sbjct: 342 EIVDLNASNIMAASTDNAKLWAEELQKTISRDNDYVLLTYQQLVGVCLYIYIRPEHAPHI 401

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +               GN+ A  +   ++G  +  +  H  +     +  N      +  
Sbjct: 402 RDVAIDCVKTGLGGATGNKGACAIRFVLHGTSMCFVCAHFAAGQSQVAERNADYAEITRK 461

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTI 228
                 L   + +  +S       GDFN +I+                     D   K  
Sbjct: 462 ------LAFPMGRTLKSHDWVFWCGDFNYRIDMEKDELKECVRNGDLSTVLEFDQLRKEQ 515

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMD--QNAYKFLIQES 274
           +  +    F + + +     K                    D  +    +   +     S
Sbjct: 516 EAGNVFGEFLEGEITFDPTYKYDLFSDDYDTSEKQRAPAWTDRVLWRRRKALAEGDFAAS 575

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +S  K+ SDH P+    D
Sbjct: 576 AWNPGKLIHYGRSELKQ-SDHRPVIAIID 603


>gi|18497296|ref|NP_569729.1| synaptojanin, isoform B [Drosophila melanogaster]
 gi|24657576|ref|NP_726155.1| synaptojanin, isoform A [Drosophila melanogaster]
 gi|7291368|gb|AAF46796.1| synaptojanin, isoform A [Drosophila melanogaster]
 gi|10727028|gb|AAG22194.1| synaptojanin, isoform B [Drosophila melanogaster]
 gi|54650882|gb|AAV37020.1| GH06496p [Drosophila melanogaster]
          Length = 1218

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 90/329 (27%), Gaps = 59/329 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ---YAKNLDA--------DI--VFLQ 72
           + ++N+    +     ++K+S+     D   L +        +         DI  +  +
Sbjct: 542 VGTYNV-NGGKHFRSIVFKDSLADWLLDCHALARSKALVDVNNPSENVDHPVDIYAIGFE 600

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVL 124
           E+   NA   +         ++ E     S+ +    +           I +R ++   +
Sbjct: 601 EIVDLNASNIMAASTDNAKLWAEELQKTISRDNDYVLLTYQQLVGVCLYIYIRPEHAPHI 660

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +               GN+ A  +   ++G  +  +  H  +     +  N      +  
Sbjct: 661 RDVAIDCVKTGLGGATGNKGACAIRFVLHGTSMCFVCAHFAAGQSQVAERNADYAEITRK 720

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTI 228
                 L   + +  +S       GDFN +I+                     D   K  
Sbjct: 721 ------LAFPMGRTLKSHDWVFWCGDFNYRIDMEKDELKECVRNGDLSTVLEFDQLRKEQ 774

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMD--QNAYKFLIQES 274
           +  +    F + + +     K                    D  +    +   +     S
Sbjct: 775 EAGNVFGEFLEGEITFDPTYKYDLFSDDYDTSEKQRAPAWTDRVLWRRRKALAEGDFAAS 834

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      +S  K+ SDH P+    D
Sbjct: 835 AWNPGKLIHYGRSELKQ-SDHRPVIAIID 862


>gi|209550572|ref|YP_002282489.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536328|gb|ACI56263.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 318

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 61/244 (25%), Gaps = 56/244 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
            RL+S+NI             N    T      +       +AD+V L E       + +
Sbjct: 95  FRLMSFNI----------AIDNWKNST-----AITDMVIASNADVVNLLEAKPLTFHLQQ 139

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F    + I                        V  K   V +Q   +   + +      
Sbjct: 140 LFKTYPYHI------------GCDTGKDTCDTLVLSKRPFVNRQVVSMGSLRKNR----- 182

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   V+  G+ I ++  HL    F D               Q   L+D         
Sbjct: 183 --LVISSVDFGGETINLVSAHLTKPYFDD--------------FQMAELEDLAKALGSID 226

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V++GDFN             K               +            I ID+   
Sbjct: 227 GPVVLSGDFNSSSIAPSIQALLRKQ-------GLKTIVPEPATWPIAAGSLGIAIDHIFA 279

Query: 263 DQNA 266
               
Sbjct: 280 RAPL 283


>gi|20379588|gb|AAH28714.1| Angel homolog 1 (Drosophila) [Homo sapiens]
          Length = 670

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 244 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDH 303

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 304 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 363

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 364 VGLVLLLQPLVPEGLGQVSVAPLCVANTHILYNPRRGDVKLAQMAILLAEVGKVARLSD- 422

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P ++ GD N   +    N
Sbjct: 423 -----GSHCPIILCGDLNSVPDSPLYN 444


>gi|322709548|gb|EFZ01124.1| DNA lyase [Metarhizium anisopliae ARSEF 23]
          Length = 608

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 44/203 (21%), Gaps = 55/203 (27%)

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             VE  V  +  +  +L+        +    N         +   + L   I        
Sbjct: 107 GIVEDTVLDSEGRCVILEFPAFVLLGVYCPANRDESRVEFRTSFFEALDVRIRNLVAEGK 166

Query: 204 PFVIAGDFNRKIN----------------------YLGNNDDFWKTIDPNDSLIRFPKEK 241
             ++ GD N   +                       L     F + I   + +    + +
Sbjct: 167 EVILTGDLNVIRSEVDSTNVMENLRKENMTIGEWISLPTRRIFNQLIFEGNIVGDRDEGR 226

Query: 242 DSR------------------CNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEIL 279
            +                   C   K           IDY +       +    +     
Sbjct: 227 QTPVLWDLCRCFHPSRLGMNTCWDTKKNTRPANNGSRIDYILCSNGIRDWFTWANIQ--- 283

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
                    G   SDHCP+    
Sbjct: 284 --------EGLMGSDHCPVFATI 298


>gi|300786277|ref|YP_003766568.1| hypothetical protein AMED_4395 [Amycolatopsis mediterranei U32]
 gi|299795791|gb|ADJ46166.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 323

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 73/286 (25%), Gaps = 71/286 (24%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              + +VS N+N  +     +                 +      A ++ L+E+      
Sbjct: 107 GGDLTVVSHNVNDENPDPAGT----------------ARALAASGAQVIALEELKKSEVP 150

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                      ++S +  +                        +  ++PL   +      
Sbjct: 151 KYEDALAVGYPYHSVQGTVG-----------------------VWSTFPLRATRPVAIMP 187

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R A+E  V+     +     HL S         T +   + +   A  +        E
Sbjct: 188 WTR-ALETTVDTPKGPVAAFVAHLPSVRVRLDAGFTANGRDAAMGLLADAIA------AE 240

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--NKIPID 258
           S    V+ GDFN   +         + + P    +   +++                 ID
Sbjct: 241 SAPRTVLVGDFNGTADD--------RALAPITRRLHSAQDEAGDGFGFSWPAGLPLARID 292

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              +       +   +   +              SDH P++    F
Sbjct: 293 QIFV-----AGVRPVAAWTLPAT----------GSDHLPVAAIVAF 323


>gi|118101615|ref|XP_417756.2| PREDICTED: similar to Type II inositol-1,4,5-trisphosphate
           5-phosphatase precursor (Phosphoinositide 5-phosphatase)
           (5PTase) (75 kDa inositol polyphosphate-5-phosphatase)
           [Gallus gallus]
          Length = 748

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 80/316 (25%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W                       DI  V  QE+         
Sbjct: 101 VGTYNVNGQSPKESLQPWLRCDSAP---------------PDIYCVGFQELDLSKEAFFF 145

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    +     +             I     V+      + +          
Sbjct: 146 NDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKADLALNISEVEIETVGTGI 205

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  + +   + V++ HL +        N          Q  Q   +   
Sbjct: 206 MGRMGNKGGVAIRFKFHNTSVCVVNSHLAAHMEEYERRNQDFKDICSRMQFCQSDPNLPP 265

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N ++  L                    D   + ++       F +
Sbjct: 266 LTIGKHDVILWLGDLNYRLEELDVTKVKQLVDERAFPELCQYDQLKRQMNAKAVFEGFTE 325

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + S     K              R     D  +           ++ +++ Y       
Sbjct: 326 GEISFQPTYKYDAGCDEWDTSEKCRVPAWCDRILW--------KGQNIAQLSYRSH---- 373

Query: 288 RGKRLSDHCPISIDYD 303
              ++SDH P+S  +D
Sbjct: 374 MALKISDHKPVSSVFD 389


>gi|326915787|ref|XP_003204194.1| PREDICTED: synaptojanin-2-like [Meleagris gallopavo]
          Length = 1487

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 45/340 (13%), Positives = 87/340 (25%), Gaps = 67/340 (19%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--VFLQ 72
           ++VR+   +WN+N   +     L  + +     D   L   ++  D      DI  V  +
Sbjct: 509 KRVRVAMGTWNVNGGKQFRSNILGTSELTDWLLDSPKLSGVSEFQDDENCPPDIFAVGFE 568

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVL 124
           EM   +A   V    T    +  +     S+      + +A        I VR  +V  +
Sbjct: 569 EMVELSAGNIVNASTTNRKMWGEQLQKAISRTHRYIQLTSAQLVGVCLFIFVRPYHVPFI 628

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +             + GN+ AV +  +        +  HL +       +          
Sbjct: 629 RDVAIDTVKTGMGGKTGNKGAVSIRFQFYSTSFCFICSHLTAG------QTQVKERNEDY 682

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFWKTI 228
            +  Q L   + +   S       GDFN +++                     D   +  
Sbjct: 683 KEITQKLSFPMGRNVFSHDYVFWCGDFNYRLDLTYEEVFYFLKRQDWKTLMEFDQLQQQK 742

Query: 229 DPNDSLIRFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESF 275
                   F +   +     K              R     D      +           
Sbjct: 743 SSGKIFKDFHEGTINFGPTYKYDVGSEAYDTSDKCRTPAWTDRVLWWRKKLPFEKTAGEI 802

Query: 276 SEILYNED---------------DIKSRGKRLSDHCPISI 300
           + +  +                        + SDH P+  
Sbjct: 803 NLLDSDLSAETKVRHTWTPGALMYYGRAELQASDHRPVLA 842


>gi|332520582|ref|ZP_08397044.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4]
 gi|332043935|gb|EGI80130.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4]
          Length = 238

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 76/293 (25%), Gaps = 71/293 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WN N    ++                    +   +L+A++  +QE          
Sbjct: 1   MRIITWNCNGAFRKKF-------------------KEISSLNAEVYVIQECEDP------ 35

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                           N+     N +    +  +             L   ++++    +
Sbjct: 36  ---LKSNHKEYKLWADNYLWIGDNKNKGVGVFAKPNI------DLKKLDWSENYNDHRVK 86

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +  N   + + +    S  F                        ++   K +L 
Sbjct: 87  YFLPCKINNNFDLLALWNHSNNSPTFG----------------YIGQFWKYLQINKSNLK 130

Query: 204 PFVIAGDFNRKINYLGNNDD-----FWKTIDPNDSLIRFP--------KEKDSRCNANKN 250
             +I GDFN    +   +         + +        +         KE        + 
Sbjct: 131 KCIILGDFNSNKIWDKWDRWWNHSDVLEELSELGIESLYHMYFNEEQGKESKPTFFLQRK 190

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           L     IDY                  +   E    S   +LSDH PI  D++
Sbjct: 191 LTKPYHIDYIFGSTEF--------IKTLNKIEVGNSSHWLKLSDHNPIITDFE 235


>gi|218461818|ref|ZP_03501909.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli Kim 5]
          Length = 222

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 61/245 (24%), Gaps = 56/245 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
            RL+S+NI             N    T      L       +AD+V L E       + +
Sbjct: 1   FRLMSFNI----------AIDNWKNST-----ALADMVIASNADVVNLLEAKPLTFHLQR 45

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F    + I               N        V  K   V++Q   +   +        
Sbjct: 46  LFKAYPYHI------------GCDNGKDSCDTLVLSKRPFVMRQVASIGSLRKDR----- 88

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   V+  G+ I ++  HL    + D               Q   L D         
Sbjct: 89  --LVVSSVDFGGQAINLVSAHLSKPYYDD--------------YQMGELDDLGKALGSIS 132

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V++GDFN             +               +            I ID+   
Sbjct: 133 GPLVLSGDFNSSAIAPSIQGLLREQ-------KLKTLAPEPATWPIAAGAFGIAIDHIFA 185

Query: 263 DQNAY 267
                
Sbjct: 186 RAPLR 190


>gi|163790917|ref|ZP_02185341.1| exodeoxyribonuclease [Carnobacterium sp. AT7]
 gi|159873870|gb|EDP67950.1| exodeoxyribonuclease [Carnobacterium sp. AT7]
          Length = 201

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/234 (10%), Positives = 58/234 (24%), Gaps = 47/234 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                             LDAD   LQE          
Sbjct: 1   MKFISWNVNGLRAIIKKGFM---------------DIFNELDADFFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  +++           +    ++  A+  K+  +           D   R    
Sbjct: 45  FKVPGYYDYWN----------YAEKKGYSGTAIFTKHKPLSVTYGIGKPEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ ++    +V+  +  +        +             + L        ++  
Sbjct: 91  -----VITLSYPDYYVVTCYTPNSKSELKRLDYRMEWEDDFLSYLKTL--------DTEK 137

Query: 204 PFVIAGDFNRKINYLGNNDD----FWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
           P ++ GD N     +   +             + L       +   +  +    
Sbjct: 138 PVILCGDLNVAHENIDLKNWKTNQKSAGFSEEERLKFSTLLDNGFIDTFRYFYP 191


>gi|241952274|ref|XP_002418859.1| phosphatidylinositol 4,5-bisphosphate 5-phosphatase, putative;
           synaptojanin-like protein, putative [Candida
           dubliniensis CD36]
 gi|223642198|emb|CAX44165.1| phosphatidylinositol 4,5-bisphosphate 5-phosphatase, putative
           [Candida dubliniensis CD36]
          Length = 986

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 88/304 (28%), Gaps = 51/304 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87
           ++N+N    +  +  W        +DY L+           + LQE+   NA   V    
Sbjct: 594 TFNVNGSVYEGDIEKWIYPE---ENDYDLI----------FIGLQEIVVLNAGQMVNTDF 640

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGAKDSFSR 139
                +  + L    KR+    + +           V++  V+ +               
Sbjct: 641 RNKTQWERKILSVLQKRNKYMVMWSGQLGGVALYFFVKESQVKYVSTVECSFKKTGLGGV 700

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           + N+  + +  + +   I  +  HL +        +    S        + ++    +  
Sbjct: 701 SANKGGIAVSFKFSDTTICFVSAHLAAGLSNIEERHQNYKSL------IKGIQFSKNRHI 754

Query: 200 ESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDS 243
           ++    +  GDFN +I+                     D   K +   +S   F +++ +
Sbjct: 755 QNHDAVIWLGDFNYRIDLTNDQVKPMILQKLYAKIFEFDQLNKQMASGESFPFFSEQEIN 814

Query: 244 RCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                K  +     D                ++  S   ++        +    SDH P+
Sbjct: 815 FPPTYKFDKGTKVYDTSEKQRI---PAWTDRILYLSRQNLIKPLSYNSCQNLTFSDHRPV 871

Query: 299 SIDY 302
              +
Sbjct: 872 YATF 875


>gi|292488822|ref|YP_003531709.1| hypothetical protein EAMY_2351 [Erwinia amylovora CFBP1430]
 gi|292899974|ref|YP_003539343.1| endonuclease/exonuclease/phosphatase [Erwinia amylovora ATCC 49946]
 gi|291199822|emb|CBJ46945.1| putative endonuclease/exonuclease/phosphatase [Erwinia amylovora
           ATCC 49946]
 gi|291554256|emb|CBA21556.1| hypothetical protein EAMY_2351 [Erwinia amylovora CFBP1430]
          Length = 372

 Score = 52.2 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 62/271 (22%), Gaps = 45/271 (16%)

Query: 32  NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI 91
              S+   + +  ++V         L    +    D++   E   +           +  
Sbjct: 91  RGYSDAPRLRVMVSNVLTPNRQAARLLAQVQAEQPDVLIALETDHWWQAQLDVLSADYPY 150

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
                            D    + V  +      +   L+                L+  
Sbjct: 151 SLK-----------CPQDNLYGMHVYSRLPLKDAEIQFLVDDAIPSMH-------MLVQL 192

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
                + +  +H       +S E+T   +          L         +  P ++ GD 
Sbjct: 193 DEQTDVRLHCVHPMPPSPTESDESTDRDA---------ELVMVGKSVASAAQPVIVTGDL 243

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N               +  +  L                   + P+D+    Q+      
Sbjct: 244 NDVAWS----RTTQLFLKISGLLDPRRGRGMFCTFHAGYPILRWPLDHVFHSQH------ 293

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   +    I+      SDH PI ID 
Sbjct: 294 --------FVLAGIRRLQNMGSDHFPILIDL 316


>gi|331218908|ref|XP_003322131.1| hypothetical protein PGTG_03668 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309301121|gb|EFP77712.1| hypothetical protein PGTG_03668 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 482

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 56/196 (28%), Gaps = 5/196 (2%)

Query: 42  LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
              +   +       + Q   + + D++ LQE+        V     + + +        
Sbjct: 114 FPGSDCLKWKDRGPAITQEIVDYEPDVICLQEVDRLADHQTVLCAAGYEVLHVIGGYEED 173

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
            K+           +   + +V++       ++   SRA     +   +        ++ 
Sbjct: 174 GKQHGLLIGWKQDLLHLVDQKVIRFDEQEFKSRVGLSRATRNVGLIAGLAFKHHPGGLVI 233

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW-ITQKKESLVPFVIAGDFNRKINYLGN 220
                F            +  L    A+ L ++ I  +  +  P  +AGD N +      
Sbjct: 234 GTAHLFWHSRYSYERTRQTAFL----AKALGEFEIQDRDTTHWPVFLAGDLNEQPGGPSY 289

Query: 221 NDDFWKTIDPNDSLIR 236
                  +   + LI 
Sbjct: 290 RLLSGAALPEKEQLIL 305



 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/223 (9%), Positives = 53/223 (23%), Gaps = 20/223 (8%)

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
               W +F + +          +  + +  A+ +K   +L++S  +  + D         
Sbjct: 268 DTTHWPVFLAGDLNEQPGG--PSYRLLSGAALPEKEQLILKESTLIHKSADHLLNKKTNE 325

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              +  E  G +  V      S       +           +      +W  +       
Sbjct: 326 -TYVTFE--GDEDRVFKDVRPSRVEDGLFDIHELKELFGSRRWLSLYGNWAEKMS----- 377

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-- 262
               G+ +          D  +              +      N     +  +DY  +  
Sbjct: 378 ----GEQDNWFKDRPEFKDQGEKAQATPCPDELGSGQYEPMWTNFTPLWRCTLDYIWVLC 433

Query: 263 ----DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                 +  +             E  +   G   SDH  +  +
Sbjct: 434 KGINSISNIEVRALLPTHRTETLEPGLPRLGVEPSDHIALMAE 476


>gi|163748125|ref|ZP_02155436.1| Endonuclease/exonuclease/phosphatase [Oceanibulbus indolifex
           HEL-45]
 gi|161378601|gb|EDQ03059.1| Endonuclease/exonuclease/phosphatase [Oceanibulbus indolifex
           HEL-45]
          Length = 362

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 69/253 (27%), Gaps = 47/253 (18%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
              T L Q  + +D D++ + E   +    K+ P +    +       N+          
Sbjct: 113 RRATDLLQVVREVDPDLLLVVETDDW-WHQKLVPLDELFPYRIKRPQDNY---------- 161

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  K          LL  K    R G       ++  +G  I    +H +      
Sbjct: 162 YGMELFSKFELEADDVRFLLSDKIPSIRTG-------VLLPSGVWIEFFGVHPRPPDPDH 214

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
             E                L     + + S    ++AGD N            ++ +   
Sbjct: 215 DSEGRDGE-----------LLLVAKEMRRSKRAAIVAGDLNDVAWSHTTR--LFQRMS-- 259

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
            +L               +   + P+D+                 +  +   +++     
Sbjct: 260 GALDPRRGRGMFNSFHAGHQLLRWPLDHIF--------------HDTSFTLVELRRLPNI 305

Query: 292 LSDHCPISIDYDF 304
            SDH P+  +  +
Sbjct: 306 GSDHFPVFAELQY 318


>gi|227496803|ref|ZP_03927073.1| endonuclease/exonuclease/phosphatase [Actinomyces urogenitalis DSM
           15434]
 gi|226833687|gb|EEH66070.1| endonuclease/exonuclease/phosphatase [Actinomyces urogenitalis DSM
           15434]
          Length = 356

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/284 (9%), Positives = 67/284 (23%), Gaps = 58/284 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + ++S+N                     +    L    + +  D+V L E  S     
Sbjct: 121 GSLTMLSFNTYM----------------GRAKVIDLALEVRQVAPDVVVLLEA-SEELTQ 163

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++        F  T                            +  S  +   +       
Sbjct: 164 QLLELTGQDGFSFTAFTAGDGG--------------SSLTTTVLVSAAIGPYEQGKVSGM 209

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              AV L     G ++              +   +       +    Q ++  + + +  
Sbjct: 210 GHGAVYLT-PAGGDELNGHARPTILGVHTIAPLPS------TMELWRQSVEKVVERCQSP 262

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDY 259
               V+AGDFN  +++        + +                              ID+
Sbjct: 263 QAGLVVAGDFNATLDH-----AVMRELGGCADAAVQGGVGGLATWPTSTRTALFGATIDH 317

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            ++D              + +     +      SDH  + ++ +
Sbjct: 318 VLVDA-------------VTWRTRWAEVVQVAGSDHRALVVELE 348


>gi|218671955|ref|ZP_03521624.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli GR56]
          Length = 316

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 62/245 (25%), Gaps = 56/245 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
            RL+S+NI             N    T      L       +AD+V L E       + +
Sbjct: 95  FRLMSFNI----------AIDNWKNST-----ALADMVIASNADVVNLLEAKPLTFHLQR 139

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F    + I               N        V  K   V++Q   +   +        
Sbjct: 140 LFKAYPYHI------------GCDNGKDSCDTLVLSKRPFVMRQVASIGSLRKDR----- 182

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   V+  G+ I ++  HL    + D               Q   L D         
Sbjct: 183 --LVVSSVDFGGQAINLVSAHLSKPYYDD--------------YQMGELDDLGKALGSIS 226

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V++GDFN             +               +            I ID+  +
Sbjct: 227 GPLVLSGDFNSSAIAPSIQGLLREQ-------KLKTLAPEPATWPIAAGAFGIAIDHIFV 279

Query: 263 DQNAY 267
                
Sbjct: 280 RAPLR 284


>gi|320532775|ref|ZP_08033557.1| endonuclease/exonuclease/phosphatase family protein [Actinomyces
           sp. oral taxon 171 str. F0337]
 gi|320135020|gb|EFW27186.1| endonuclease/exonuclease/phosphatase family protein [Actinomyces
           sp. oral taxon 171 str. F0337]
          Length = 323

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/335 (11%), Positives = 79/335 (23%), Gaps = 71/335 (21%)

Query: 24  VRLVSWNINTLSEQEGVS-----------LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +R++S N+       G                +      +      +    L  DI+ LQ
Sbjct: 2   IRVLSLNLQHGLPGAGAGDGSASTGSLAGADISDPATARAVMRATAEQIAELAPDIIALQ 61

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERL----INHSKRDSNNDIH----------------- 111
           E+    A +    +  +              +++                          
Sbjct: 62  EVDLGQARSGRLHQAAFLAEELGMPTCRFSASYAGPVVGLRRRPLRTALSSPTDDVLGPL 121

Query: 112 ----------TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR--AVELLVEINGKKIWV 159
                        A+  +          L     S  + G R        V    ++I V
Sbjct: 122 RAAVGSGPIGYGNALLSRFPVSGWHVKRLGRGASSVEKRGERAWDPRSYHVSTASQRIMV 181

Query: 160 ---LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
              LD+   +   +  L    +   +  S  A+ L            P ++ GD+N    
Sbjct: 182 AATLDVPEGAGGPIRQLSVASTHLATRESMAARQLAAAWGALAGLPGPHLLVGDYN---- 237

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-----QN---AYK 268
                      +      +                  K  ID+ + D      +      
Sbjct: 238 -----------LSAEHVDVLGLGRTVGEGLTFPASGPKRRIDHVLTDLWPTGPDGLPLTD 286

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  S +L   D   +    +SDH    +D +
Sbjct: 287 EAAAAGGSPLLRAVDWG-TASFIISDHVGTWVDLE 320


>gi|154334845|ref|XP_001563669.1| AP-endonuclease [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060691|emb|CAM37706.1| apurinic/apyrimidinic endonuclease-redox protein [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 444

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/332 (13%), Positives = 80/332 (24%), Gaps = 83/332 (25%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAVA 81
           + ++WN+  L                  + ++LR++ +    D++ LQE           
Sbjct: 129 KFITWNVAGLRGL------------LKKNASVLREFIEAEKPDVLCLQETKLNTDEADAN 176

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            V        F             +   +  +  V+ +      + + L     + +  G
Sbjct: 177 AVLGVVDGYTFVDHPCAFKRGYSGTRTYMKNSTFVQ-QLHARCTRGFILPSTPQADAATG 235

Query: 142 NRRAVELLVEINGKKIWVL------------------DIHLKSFCFLDSLENTYSPSCSL 183
           +   VE   +  G+ +                          S   L  L          
Sbjct: 236 SPVLVEGAGDEEGRVLTTFLSSDSTSSSPSLRIALVNTYVANSGMGLARLPYRIQSFDPN 295

Query: 184 LSQQAQWLKDWITQKKE----------SLVPFVIAGDFNRKINYLGNNDD---------- 223
           + +    L  W T              S   F+ AGD N                     
Sbjct: 296 MREYLHQLDVWATPNAAVPSVAAGSGGSPYGFIWAGDLNVAERDYDRYYAGTFKSMQESS 355

Query: 224 ---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQN 265
                    F +T+    S+  F +              +           +DYF++   
Sbjct: 356 GFAPEERMSFRETMRRTSSVDVFRQLYPQAGPVYSFWSQRINGRLRNLGWRLDYFIVSSR 415

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                        LY  D         SDHCP
Sbjct: 416 LA-----------LYVVDCFPMPTVMGSDHCP 436


>gi|317508423|ref|ZP_07966093.1| endonuclease/Exonuclease/phosphatase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253270|gb|EFV12670.1| endonuclease/Exonuclease/phosphatase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 335

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/256 (9%), Positives = 53/256 (20%), Gaps = 31/256 (12%)

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
              +D   L    ++   D++ ++E+      A      +  + YS          DS  
Sbjct: 105 WGKADPKALLNVVRSRHVDVLAVEEVTPEELAALRSAGMSDALPYSFTLPGLIRVGDSQL 164

Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168
                  +  +   V        G  +       R                + +   ++ 
Sbjct: 165 ATPCDTVIFSRYPLVDSAELVGPGGWNFLHH-PLRSVARTPWGPVAVVAAHVMVPWPAYM 223

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
                          +    + L              V+AGDFN   +            
Sbjct: 224 TNP-GYVRNPTWGFEIRPFREALAAL-----PRDERVVVAGDFNATYDVADYRAILAAGF 277

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPI---DYFVMDQNAYKFLIQESFSEILYNEDDI 285
                      +  +             +   D+ +                      D 
Sbjct: 278 ADAGI------QSGAGFVPTWEQGEPWQLLASDHVLARNAVAT---------------DF 316

Query: 286 KSRGKRLSDHCPISID 301
           +S     SDH  +   
Sbjct: 317 ESFRLVGSDHAGVIAT 332


>gi|308806866|ref|XP_003080744.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
 gi|116059205|emb|CAL54912.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
          Length = 866

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/348 (10%), Positives = 77/348 (22%), Gaps = 79/348 (22%)

Query: 25  RLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYNA- 79
           R+V++N+    L++    +       R  +    +        A   ++ LQE+    A 
Sbjct: 261 RVVTYNVLSSHLADPGYFTHCDPDDLRAETRLERVMAKLDAECAGRAVIGLQEVSMSWAG 320

Query: 80  -VAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKN---------------- 120
            +   F K  +    S   +   N+              VR                   
Sbjct: 321 PLHAYFAKKGYTFILSLYGKPFNNYMGVGLAVPTDAYELVRSDISRLSDTVKFPRVKPKE 380

Query: 121 -----------------VRVLQQSYPLLGAKDSFSRAGNRR--AVELLVEINGKKIWVLD 161
                            V + ++          +  A NR    +   ++     +    
Sbjct: 381 ANFGPLTPVYNLLVKTPVGLWRKLTDYRPPMTEWDTARNRFNSILHATLKCKKSDVSFGV 440

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN- 220
                 C         +    ++   A     +        +P V+ GDFN K    G+ 
Sbjct: 441 ATYHMPC-----MFRTAADRRVMVIHAGMAAQYALNH-SEGLPTVLMGDFNLKPGDPGHV 494

Query: 221 ---------------------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                                           K       +        +      +   
Sbjct: 495 LITTGELDTSIDEYPVMPEGYIGSPFNVKPQKKMESAYARVNGAEPNFTNNARIKDDEPF 554

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +DY  +  +     + +                   SDH  ++  
Sbjct: 555 IDTLDYIFVTDDVEVLDVLDLPHRDEVKGP--FPAATEPSDHIMLAAT 600


>gi|323516947|gb|ADX91328.1| hypothetical protein ABTW07_0892 [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 294

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 80/308 (25%), Gaps = 47/308 (15%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q + +  WNIN        + W  S        + + Q    LD D + L E+       
Sbjct: 3   QSLFVGFWNINL--SPPIGNRWNKSKVDKKIKVSRVIQGLLKLDFDFLCLCEVS------ 54

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-DSFSRA 140
              P++   I  S + +      +     +  +      +      +     + D   + 
Sbjct: 55  ---PEDMEFIDNSIQLIGMGYDYNIYRKNYGGLYFDTCVIFKNTFDFVQSKVEVDGEEKN 111

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             +   +        +  ++         L+  +       S + +     K +  + K 
Sbjct: 112 KLKVFQKYEFLSGHLEERIIFYVTHWLSQLNDNKEKRRTVASFIKKDTNDEKKFFNKTK- 170

Query: 201 SLVPFVIAGDFNRKI--------------------NYLGNNDDFWKTIDPNDSLIRFPKE 240
               FV+ GDFN +                     N     + FWK +   +        
Sbjct: 171 ----FVVLGDFNVEPYDSAILEGLRSTRDQKVISNNSSLFYNPFWKFLQIKEDQPSGTHH 226

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRGK--RLSDH 295
                  +         D  ++  N ++    L                        SDH
Sbjct: 227 CTKNEFHH-----WHIYDQILVSGNFFRDGWNLDDNLVLVFDDKMISSLHNDSFSNPSDH 281

Query: 296 CPISIDYD 303
            PI +  +
Sbjct: 282 LPICLKLE 289


>gi|307150799|ref|YP_003886183.1| C-type lectin domain-containing protein [Cyanothece sp. PCC 7822]
 gi|306981027|gb|ADN12908.1| C-type lectin domain protein [Cyanothece sp. PCC 7822]
          Length = 4069

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 88/326 (26%), Gaps = 66/326 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---- 76
           AQ +R+ +WNI         +  +N ++R       + +Y+     D++ LQE+      
Sbjct: 453 AQDLRVATWNIWDGRGNGQRAGIQNILQR----INYIARYSDYAGIDLITLQEIPDSDQQ 508

Query: 77  --------------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT---- 112
                                  + ++    ++ +  S       +  +S+ +++T    
Sbjct: 509 PLARALYAYQNNQPLPNQYTQQGLQQMLNGYSFIVVPSENNPRTPNVPNSDGELNTNSSD 568

Query: 113 AIAVRKKNVRVLQQSYPLLGAKD----------SFSRAGNRRAVELLVEINGKKIWVLDI 162
              +      +   S       D          +F+    R   E+ +  +        +
Sbjct: 569 GYLILYDPNTITINSSGFFRPNDFYASLNSGNNNFTNYYLRPPYEVNITHSNSNQQYRIL 628

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINY--L 218
              +     +L      +          L   +       +  P ++ GDFN ++N    
Sbjct: 629 TWHNEYEGGALAQNARIAG------FDDLVHSLRNTNNPNNNTPTLVLGDFNVRLNENIN 682

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
                           +              +  N    DY + + N           ++
Sbjct: 683 IPISQTQTVTASVTDWLAGNINGLDSPYRGVHHTN---YDYIIANGNI----------QV 729

Query: 279 LYNEDDIKSRGKRLSD-HCPISIDYD 303
            Y   D       LSD H  +     
Sbjct: 730 NYLGQDRTDSPLLLSDSHQALFAQIS 755


>gi|212715437|ref|ZP_03323565.1| hypothetical protein BIFCAT_00332 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661612|gb|EEB22187.1| hypothetical protein BIFCAT_00332 [Bifidobacterium catenulatum DSM
           16992]
          Length = 365

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 73/297 (24%), Gaps = 58/297 (19%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           A+         +     RL++ N+                 +  +D   +    ++   +
Sbjct: 125 AIAAVSGASANTQDDYARLMTCNVF----------------KGHADAQEIVDVVRSERVE 168

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ LQE      V ++       +    +   +     +                 L  +
Sbjct: 169 VLALQETTD-AFVDELNKAGIGDLLPYAQVASSDGVYGNG----------------LWSA 211

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
            PL    D    +         V ++  +  +  + + +    D     +  S       
Sbjct: 212 SPLGDPADDDVDSSASFMPGATVALDDGQTQIRFVSVHTTSPTDGYWQQWKRS------- 264

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L +    + ++   +V  GDFN   ++    +                       N 
Sbjct: 265 ---LDELGRLRYDTSRRYVFMGDFNATDDHTPFRNFLGARFTDAAKQAAGGLVFTWPANI 321

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +        ID+ V+D                   D         SDH  +     F
Sbjct: 322 DYVPTFAG-IDHIVLDSGMLAG------RVKSLKID--------GSDHKALLATVQF 363


>gi|164656351|ref|XP_001729303.1| hypothetical protein MGL_3338 [Malassezia globosa CBS 7966]
 gi|159103194|gb|EDP42089.1| hypothetical protein MGL_3338 [Malassezia globosa CBS 7966]
          Length = 916

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 75/307 (24%), Gaps = 44/307 (14%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + ++N+ T + Q                   +          +   Q + S     + + 
Sbjct: 481 VGTYNVCTRAPQGLDMRSWLCPSTYHQAPADIVAIVLEELVPLNAQQLLQSAKEELESWK 540

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                   ST       + +        + V+   +  ++              +GN+  
Sbjct: 541 LAVTRTLESTGVQYELLRHELLFGTALLVLVKSDVLPHVKNVEGTTKKTGFRGMSGNKGG 600

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           V + +++    +  +  HL S        N    +        +       +  ES    
Sbjct: 601 VAVRLDLFDTSVCFVGSHLPSGASNYEDRNADYAAIERNLVFMR------GRTIESHDHI 654

Query: 206 VIAGDFNRKINYLGNNDD-------FWKTIDPNDSLIRFPKEKDSRCN----------AN 248
           + AGD N +I  L   D            +   D L    K  D+  N            
Sbjct: 655 IWAGDLNYRIGNLSPEDVRDFASRKVLAPLLEGDQLTHARKLGDAFPNYDEAPIQFPPTY 714

Query: 249 KNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
           K              R     D  +         +                   R+SDH 
Sbjct: 715 KYDIGSDIYDTSEKLRPPAWTDRILFKCKLPSLYV---------RTHGYDCAPIRVSDHR 765

Query: 297 PISIDYD 303
           P+ +  +
Sbjct: 766 PVYVHLE 772


>gi|291009775|ref|ZP_06567748.1| membrane protein [Saccharopolyspora erythraea NRRL 2338]
          Length = 281

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 58/254 (22%), Gaps = 66/254 (25%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           L+P  ++ A  +R+ + N+   +                 D         +  AD++ +Q
Sbjct: 70  LLPSASAQAGDLRVATQNLYAQNP----------------DPAATAHDLASTGADLIGVQ 113

Query: 73  EM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           EM   S   +  V                                 R      L  SYP+
Sbjct: 114 EMAGDSRQELDDVLADRHPHH-------------------------RTMGTVGLWSSYPI 148

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            GA+      G  RA+   +      + V   HL S             +          
Sbjct: 149 RGAEPVDLGLGWTRAMRASITTPSGPVTVYVAHLPSLRPDSVGRRDLGMA---------- 198

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
            K       +     ++  D N             +              +         
Sbjct: 199 -KLAAAVADDDAERVIVLADLNTAGTDPQLGRLHLQ------------HAQRGLGFTWPA 245

Query: 251 LRNKIPIDYFVMDQ 264
                 +D+ +   
Sbjct: 246 AFPVARLDHVLYRG 259


>gi|255011809|ref|ZP_05283935.1| hypothetical protein Bfra3_21905 [Bacteroides fragilis 3_1_12]
 gi|313149648|ref|ZP_07811841.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138415|gb|EFR55775.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 678

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 83/319 (26%), Gaps = 76/319 (23%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + +  V+++ WNI       G                 +    ++  AD+V +QE  
Sbjct: 403 NNQTHSNIVKVLQWNIWHGGIHLGNEGQ-----------QRVFDLIRSTHADVVMMQEAY 451

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                  +     + +   + +                +A+  +                
Sbjct: 452 GIQ--QMLADSLGYHLKTHSLKDN--------------LAMYSRFPL----------EPI 485

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ----WL 191
           ++         ++ +  NGK+I ++D  L+     +                A+     L
Sbjct: 486 AWREPFKSNPAKITL-PNGKRIMLVDCWLRYAYRPEYTSGYAEKGLDPSVWVAEDSILAL 544

Query: 192 KDW-------ITQKKESLVPFVIAGDFNRKINYLGNNDD-------------FWKTIDPN 231
            D        I   +E+ +P +I GDFN   +                      + +  N
Sbjct: 545 PDIRNIYTKDIVPNQETDMPVIITGDFNSCSHLDWTERAKPLHHGYGPVAFPASRYMLEN 604

Query: 232 DSLIRFPKEKD------SRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                F ++            A    +     ID+          ++           D 
Sbjct: 605 GFKDSFREKNPDEVAYQGGTVAAIYGQMQMSRIDFIYYKGGL--KVLSSKIVRTAPEIDY 662

Query: 285 IKSRGKRLSDHCPISIDYD 303
           +       SDH  +   ++
Sbjct: 663 V-----WASDHAAVLTVFE 676


>gi|167524735|ref|XP_001746703.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774973|gb|EDQ88599.1| predicted protein [Monosiga brevicollis MX1]
          Length = 365

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 43/150 (28%), Gaps = 25/150 (16%)

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
              +++ V   H+        +   +          A  +   + +  +  VP+V+AGDF
Sbjct: 236 DPDQELVVATYHMPCAFRYPKIMGAH----------AATVGQLVQKWAQ-DVPYVLAGDF 284

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N + +    +             +   +   +      + +    +DY  +         
Sbjct: 285 NFQPDSDCYH-------------LLTTEPDHTNMATTPDNKFCGTLDYIFLAPKLGASA- 330

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     +D      +  SDH  I  D
Sbjct: 331 ASVIPHRENVQDGPYPNAREPSDHLLIWAD 360


>gi|227515521|ref|ZP_03945570.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           fermentum ATCC 14931]
 gi|227086134|gb|EEI21446.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           fermentum ATCC 14931]
          Length = 378

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/337 (11%), Positives = 96/337 (28%), Gaps = 70/337 (20%)

Query: 15  PCTASVAQKVRLVSWNI-------NTLSEQEGVSLWKNSVKRTTS-----------DYTL 56
             T +  +     ++N+             +   L   +  R              D   
Sbjct: 60  AATLTTGKVYTATTYNVGFGAYNHQFSFFMDAGELKSGTKTRGKYGTARSKAVVLTDTKG 119

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTERLI 99
           + +  +   AD +  QE+ + +  +K                 VF  N    F       
Sbjct: 120 VERVMQAQQADFMLFQEIDTNSTRSKHVNQVRMVENKFHGYGHVFANNFHSAFLMWPLTD 179

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIW 158
            H    S          R       ++ YP+  +  S     +R      + + NGK++ 
Sbjct: 180 PHGSVQSGLLT----LSRYHIGSATRRQYPVTNSFISKFTDLDRCFAVTTIPVTNGKQLL 235

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--- 215
           +++          S  + Y     +   Q + L   I +   +    ++ G++N  +   
Sbjct: 236 LIN----------SHMSAYDKGGKMRKAQMKLLNAVIERAYLASNYVIVGGNYNHALGKD 285

Query: 216 ---------NYLGNNDDFWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYFVMDQN 265
                              +++      +   + +++     + +L  +  ++Y  +   
Sbjct: 286 MLTHFASQEKVPDWVSVLDQSMVAKGFTMVKAQNRETVPTVRSTDLAYRSGVNYLTVCDG 345

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               L+  + +    N +          DH P+ + +
Sbjct: 346 F---LVSNNVTATATNINTDFDYA----DHNPVKLTF 375


>gi|134101787|ref|YP_001107448.1| membrane protein [Saccharopolyspora erythraea NRRL 2338]
 gi|133914410|emb|CAM04523.1| membrane protein [Saccharopolyspora erythraea NRRL 2338]
          Length = 286

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 58/254 (22%), Gaps = 66/254 (25%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           L+P  ++ A  +R+ + N+   +                 D         +  AD++ +Q
Sbjct: 72  LLPSASAQAGDLRVATQNLYAQNP----------------DPAATAHDLASTGADLIGVQ 115

Query: 73  EM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           EM   S   +  V                                 R      L  SYP+
Sbjct: 116 EMAGDSRQELDDVLADRHPHH-------------------------RTMGTVGLWSSYPI 150

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            GA+      G  RA+   +      + V   HL S             +          
Sbjct: 151 RGAEPVDLGLGWTRAMRASITTPSGPVTVYVAHLPSLRPDSVGRRDLGMA---------- 200

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
            K       +     ++  D N             +              +         
Sbjct: 201 -KLAAAVADDDAERVIVLADLNTAGTDPQLGRLHLQ------------HAQRGLGFTWPA 247

Query: 251 LRNKIPIDYFVMDQ 264
                 +D+ +   
Sbjct: 248 AFPVARLDHVLYRG 261


>gi|296205915|ref|XP_002749987.1| PREDICTED: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 1
           [Callithrix jacchus]
          Length = 1186

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 88/307 (28%), Gaps = 35/307 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + +WN+      + ++ W  S  +  +       Y    D  ++  QE     +  +
Sbjct: 404 TIFIGTWNMGNALPPKKITSWFLSKGQGKTRDDS-ADYI-PHDIYVIGTQE--DPLSEKE 459

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   +   T          +  +I   +  + ++   +             +  GN
Sbjct: 460 WLEILKHSLQEITSMTFKTIAIHTLWNIRIVVLAKPEHENRISHICTDNVKTGIANTLGN 519

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           + AV +    NG  +  ++ HL S       +   + +   + +        ++    + 
Sbjct: 520 KGAVGVSFMFNGTSLGFVNSHLTSGS---EKKLRRNQNYMNILRFLALGDKKLSPFNITH 576

Query: 203 V--PFVIAGDFNRKINYLGN------------NDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
                   GD N +++                +D            + F +E+ +     
Sbjct: 577 RFTHLFWLGDLNYRVDLPTWKIKQQQYADLLCHDQLLTERKEQKVFLHFEEEEITFAPTY 636

Query: 249 KNLRNKIPID-YFVMD----------QNAYKFLIQESFS-EILYNEDDIKSRGKRLSDHC 296
           +  R     D Y               +    ++ +S+    +  +    +     SDH 
Sbjct: 637 RFERYTR--DKYAYTKQKATGMKYNLPSWCDRVLWKSYPLVHVVCQSYGSTTDIMTSDHS 694

Query: 297 PISIDYD 303
           P+   ++
Sbjct: 695 PVFATFE 701


>gi|255727112|ref|XP_002548482.1| hypothetical protein CTRG_02779 [Candida tropicalis MYA-3404]
 gi|240134406|gb|EER33961.1| hypothetical protein CTRG_02779 [Candida tropicalis MYA-3404]
          Length = 499

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 72/259 (27%), Gaps = 35/259 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++S+N+   +         N    + +    +L    K+ +ADI+ LQE+       
Sbjct: 92  TIKIMSYNVLAQTLIRREIYPTNGKILKWSVRSQILLDELKHYNADILCLQEVD------ 145

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           KV   + W   +      +   R +  +    I  R+       QS+  L    + +   
Sbjct: 146 KVQYTSFWSSQFEKLGYGSKFYRYNTKNHGCVIVFRQSLFDCKNQSFIKLDQDLNQTDDE 205

Query: 142 NRRAVELLVEINGKKIWV--------------------LDIHLKSFCFLDSLENTYSPSC 181
            +   +  +  N     V                    + I      +        +   
Sbjct: 206 KKLP-DARIATNNIGFMVYLEFQPKFVKQYPVLENANGIIIGTTHLFWHPFGTYERTRQM 264

Query: 182 SLLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
            +L  + +  +  +     +   F     GDFN +           K I           
Sbjct: 265 YILMYKFKEFQHVLNIILGNHKKFYSFFTGDFNSEPFDSPYRAITTKPIKFAGRSKNV-- 322

Query: 240 EKDSRCNANKNLRNKIPID 258
                C+ +        +D
Sbjct: 323 ---LGCSLSYTFSKDRSLD 338


>gi|149068713|gb|EDM18265.1| inositol polyphosphate phosphatase-like 1, isoform CRA_a [Rattus
           norvegicus]
 gi|149068714|gb|EDM18266.1| inositol polyphosphate phosphatase-like 1, isoform CRA_a [Rattus
           norvegicus]
 gi|149068719|gb|EDM18271.1| inositol polyphosphate phosphatase-like 1, isoform CRA_a [Rattus
           norvegicus]
 gi|149068720|gb|EDM18272.1| inositol polyphosphate phosphatase-like 1, isoform CRA_a [Rattus
           norvegicus]
          Length = 958

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 429 IGTWNMGSVPPPKNVTSWFTSKGLGKA-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 486

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 487 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 542

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 543 GAVGVSFMFNGTSFGFVNCHLTSGNEKTTRRNQNYLDILRLLSLGDRQLSAFDISLRF-- 600

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 601 ---THLFWFGDLNYRLDMDIQEILNYISRREFEPLLRVDQLNLEREKHKVFLRFSEEEIS 657

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 658 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 713

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 714 IVT-----SDHSPVFGTFE 727


>gi|148684576|gb|EDL16523.1| inositol polyphosphate phosphatase-like 1, isoform CRA_b [Mus
           musculus]
          Length = 1183

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 429 IGTWNMGSVPPPKNVTSWFTSKGLGKA-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 486

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 487 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 542

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 543 GAVGVSFMFNGTSFGFVNCHLTSGNEKTTRRNQNYLDILRLLSLGDRQLSAFDISLRF-- 600

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 601 ---THLFWFGDLNYRLDMDIQEILNYISRREFEPLLRVDQLNLEREKHKVFLRFSEEEIS 657

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 658 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 713

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 714 IVT-----SDHSPVFGTFE 727


>gi|170172575|ref|NP_034697.2| phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2 [Mus
           musculus]
 gi|170172577|ref|NP_001116211.1| phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2 [Mus
           musculus]
 gi|81885200|sp|Q6P549|SHIP2_MOUSE RecName: Full=Phosphatidylinositol-3,4,5-trisphosphate
           5-phosphatase 2; AltName: Full=AblSH3-binding protein;
           AltName: Full=Inositol polyphosphate phosphatase-like
           protein 1; Short=INPPL-1; AltName: Full=SH2
           domain-containing inositol-5'-phosphatase 2; Short=SH2
           domain-containing inositol phosphatase 2; Short=SHIP-2
 gi|38649246|gb|AAH63080.1| Inositol polyphosphate phosphatase-like 1 [Mus musculus]
 gi|148684577|gb|EDL16524.1| inositol polyphosphate phosphatase-like 1, isoform CRA_c [Mus
           musculus]
          Length = 1257

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 429 IGTWNMGSVPPPKNVTSWFTSKGLGKA-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 486

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 487 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 542

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 543 GAVGVSFMFNGTSFGFVNCHLTSGNEKTTRRNQNYLDILRLLSLGDRQLSAFDISLRF-- 600

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 601 ---THLFWFGDLNYRLDMDIQEILNYISRREFEPLLRVDQLNLEREKHKVFLRFSEEEIS 657

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 658 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 713

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 714 IVT-----SDHSPVFGTFE 727


>gi|225047|prf||1207289A reverse transcriptase related protein
          Length = 1259

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/292 (10%), Positives = 75/292 (25%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ N+N L+                     L  + K+ D  +  +QE         +
Sbjct: 7   ITILTLNVNGLNAP--------------IKRHRLANWIKSQDPSVCCIQE-------THL 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             ++T  +     R      + +       +A+                           
Sbjct: 46  TCRDTHRLKIKGWRN---IYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 96  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 138

Query: 204 PFVIAGDFNRKINYLGN-------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  ++ L               N    +    +      PK  +    +  +
Sbjct: 139 -TIIMGDFNTPLSTLDRSTRQKINKDIQELNSALHQADLIDIYRTLHPKSTEYTFFSAPH 197

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  D+ +  +       +                   LSDH  I ++ 
Sbjct: 198 HTYSKT-DHILGSKTLLSKCKRTEIITNC------------LSDHSAIKLEL 236


>gi|12621112|ref|NP_075233.1| phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2 [Rattus
           norvegicus]
 gi|81869928|sp|Q9WVR3|SHIP2_RAT RecName: Full=Phosphatidylinositol-3,4,5-trisphosphate
           5-phosphatase 2; AltName: Full=Inositol polyphosphate
           phosphatase-like protein 1; Short=INPPL-1; AltName:
           Full=SH2 domain-containing inositol-5'-phosphatase 2;
           Short=SH2 domain-containing inositol phosphatase 2;
           Short=SHIP-2
 gi|5381251|dbj|BAA82308.1| SH2-containing inositol phosphatase 2 (SHIP2) [Rattus norvegicus]
          Length = 1257

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 429 IGTWNMGSVPPPKNVTSWFTSKGLGKA-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 486

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 487 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 542

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 543 GAVGVSFMFNGTSFGFVNCHLTSGNEKTTRRNQNYLDILRLLSLGDRQLSAFDISLRF-- 600

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 601 ---THLFWFGDLNYRLDMDIQEILNYISRREFEPLLRVDQLNLEREKHKVFLRFSEEEIS 657

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 658 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 713

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 714 IVT-----SDHSPVFGTFE 727


>gi|5263147|dbj|BAA81818.1| SHIP-2 [Rattus norvegicus]
          Length = 1183

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 429 IGTWNMGSVPPPKNVTSWFTSKGLGKA-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 486

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 487 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 542

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 543 GAVGVSFMFNGTSFGFVNCHLTSGNEKTTRRNQNYLDILRLLSLGDRQLSAFDISLRF-- 600

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 601 ---THLFWFGDLNYRLDMDIQEILNYISRREFEPLLRVDQLNLEREKHKVFLRFSEEEIS 657

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 658 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 713

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 714 IVT-----SDHSPVFGTFE 727


>gi|323497996|ref|ZP_08103005.1| hypothetical protein VISI1226_08137 [Vibrio sinaloensis DSM 21326]
 gi|323317041|gb|EGA70043.1| hypothetical protein VISI1226_08137 [Vibrio sinaloensis DSM 21326]
          Length = 289

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 81/282 (28%), Gaps = 64/282 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q+V ++ WNI           +K +     S+   L +        +V LQE      + 
Sbjct: 60  QQVSVLVWNI-----------YKQNRANWQSELERLSE-----GKQLVLLQEASMTAELR 103

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       S +   +        D    +    +    L  +Y  L          
Sbjct: 104 --------QWIQSKQWFGSQVDAFKAFDTTAGVLNLSQPTPSLACAYTELEP----WLRL 151

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            + A+     + NG+ + V++IH  +F +  +                  L   + Q  +
Sbjct: 152 PKSALYATYPLSNGQALAVVNIHAVNFTYGTTEYRR-------------QLDVLVDQLLK 198

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++AGDFN             + ++         KE   + +        + +D+ 
Sbjct: 199 HQGPIIVAGDFNSW--SDARMKVMQQALNKLGL-----KEAQYQPDNRTQFMTGLALDHV 251

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                 +  K+     SDH PI + +
Sbjct: 252 FYRD---------------LVVETAKAPVTDASDHNPIEMRF 278


>gi|302336142|ref|YP_003801349.1| Endonuclease/exonuclease/phosphatase [Olsenella uli DSM 7084]
 gi|301319982|gb|ADK68469.1| Endonuclease/exonuclease/phosphatase [Olsenella uli DSM 7084]
          Length = 427

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 92/345 (26%), Gaps = 93/345 (26%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKR----------------------TTSDYTLL 57
             Q     ++NI   +     + + +                          T  D   +
Sbjct: 110 AGQTYTATTYNIGFGAYTPDYTFFMDRGAMADGTATQGTSSVATGEQSVRDCTAGDIATM 169

Query: 58  RQYAKNLDADIVFLQEMGSYNAV-----------------AKVFPKNTWCIFYSTERLIN 100
           R  A  +  D +  QE+   +                     VF  N    F +      
Sbjct: 170 RAAAGGMAPDFMLFQEVDVDSDRSYHVDQRTALADAFPTYQSVFASNFHAGFLAWPPTSP 229

Query: 101 HSKRDSNN----DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156
           H +  S      D+    A+R+                  F        + + V  +G++
Sbjct: 230 HGRVSSGLLTLADVDVTSALRRSYPVDESFPTKFFDLDRCFE------VLRVPVS-DGRE 282

Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK-- 214
           + +++ HL +          Y    ++ ++Q   L   ++ ++ +    +  GD+N    
Sbjct: 283 LVLINSHLSA----------YDEGGTVRARQLSMLGAALSAERAAGNYVIAGGDWNHALC 332

Query: 215 ------INYLGNNDDFWKTIDPNDSLIRFPKEKDSR------CNANKNLR-----NKIPI 257
                  +     D    T+D  D    F   +         C  +           + +
Sbjct: 333 GSLELYPSQQQVPDWV-ATLDDEDLPEGFSVVRAGNLEEVASCRGDDIPYERDVTYTVTV 391

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D FV+  N                       G   SDH P+ + +
Sbjct: 392 DGFVVSDNVSA-------------TATNIDTGFATSDHNPVLLSF 423


>gi|254580597|ref|XP_002496284.1| ZYRO0C14872p [Zygosaccharomyces rouxii]
 gi|238939175|emb|CAR27351.1| ZYRO0C14872p [Zygosaccharomyces rouxii]
          Length = 496

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 70/239 (29%), Gaps = 16/239 (6%)

Query: 23  KVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYN 78
           K +L+++N +     +  +        +      +L    K  +AD++ LQE+      +
Sbjct: 95  KFKLMTYNCLAQALIRRKLFPTSGDALKWYRRSKVLLNEFKYYNADVICLQEIDYIQYQS 154

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                  K  +   +  +   NH            +   K  +   ++S   +  + + +
Sbjct: 155 FWKDELAKLGYDSQFHRQASKNH-GVAIVWKREYFVMTDKMLIDFDRESSGDIPPRTTTN 213

Query: 139 RAGNRRAVEL------LVEINGKKIWVLDIHLKSFCFLDSLENTY----SPSCSLLSQQA 188
            AG   +++          +    I V   HL    F                   S + 
Sbjct: 214 NAGLILSLKFSDKVAQEHNLKKTGIIVGTTHLFWHPFGTFERTRQCYVVLNKVKEFSHRV 273

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             L++          PF   GDFN +           K I+ +       +   S   +
Sbjct: 274 NVLQNGNDGDHSHWYPFF-CGDFNSQPFDSPYLSMTRKPIEYSKRAKTVIECSTSYTFS 331


>gi|301618164|ref|XP_002938495.1| PREDICTED: synaptojanin-1-like [Xenopus (Silurana) tropicalis]
          Length = 1593

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 95/348 (27%), Gaps = 69/348 (19%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           +  +K+R  + +WN+N   +   ++   +++     D   +    +  D      DI  +
Sbjct: 532 AKPRKIRICVGTWNVNGGKQFRSIAYKNSTLTDWLLDAPRIAGIQEFQDRRSKPVDIFAI 591

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W          +H      ++    +     +R ++ 
Sbjct: 592 GFEEMVELNAGNIVNASTANQKLWATELQKTVSRDHKYVLLASEQLVGVCLYIFIRPQHA 651

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 652 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 705

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
              ++ A+ L   + +   S       GDFN +I+                     D   
Sbjct: 706 EDYNEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKEMIRNQNWDSLILGDQLI 765

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMD---------- 263
              +       F + K +     K                    D  +            
Sbjct: 766 NQKNSGQVFRGFQEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 825

Query: 264 ------QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS--IDYD 303
                  ++ +      ++              + SDH PI   ID D
Sbjct: 826 EDLDLLNSSLQEGKNIPYTWNPGTLLHYGRVELKTSDHRPIVSLIDID 873


>gi|290581317|ref|YP_003485709.1| hypothetical protein SmuNN2025_1791 [Streptococcus mutans NN2025]
 gi|254998216|dbj|BAH88817.1| hypothetical protein SMU.2046c [Streptococcus mutans NN2025]
          Length = 280

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 69/273 (25%), Gaps = 54/273 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
                +L +     D D++ +QE+              +C    T               
Sbjct: 25  QKKLEILGKTILENDYDVICVQEVNQLLHSEPAKDLPNYCQVAGTPAIHKDNYALQLVTF 84

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +     +A+  K   V      L+   D       RRA+  
Sbjct: 85  LLEQERVYYWSWAYNHIGYDRFQEGVAILSKTPLV--SQGILISDVDDEHNYHTRRALLG 142

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             +I+ + I ++ +H+  +      E                            +P ++ 
Sbjct: 143 KTKIDQEDIAIVSLHMSWWNKGFQGEWNKLE----------------RALSNLKLPLLLM 186

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMD 263
           GDFN      G       ++   DS                 +  +  +  + +DY  + 
Sbjct: 187 GDFNNPYENEGYQAILKSSLKLQDSHQSAKITYGKATIQKEIDGWQGNQEALKVDYVFLS 246

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            +      +  F    Y           +SDHC
Sbjct: 247 SDWQVEKSEVIFDGKHYP---------MISDHC 270


>gi|255712199|ref|XP_002552382.1| KLTH0C03608p [Lachancea thermotolerans]
 gi|238933761|emb|CAR21944.1| KLTH0C03608p [Lachancea thermotolerans]
          Length = 495

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/237 (8%), Positives = 60/237 (25%), Gaps = 13/237 (5%)

Query: 24  VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +L+++N +     +  +     +  +      +L     + ++D++ LQE+      + 
Sbjct: 96  FKLMTYNCLAQALIRRKLFPTSGNALKWFKRSRVLLNEFMHYNSDVLCLQEVDYIQYQSF 155

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
              +     + S                   +      + +     P    +   +    
Sbjct: 156 WKEEFEKLGYESQFHRHGTKNHGIAIVWKRDMFTMVDKMLIDYDKEPSGALEPRTTTKNV 215

Query: 143 RRAVELLV------EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             A+ L        +  G     + +      +        +  C ++  + +     I 
Sbjct: 216 GLAIALGFTKKVLAKYPGSSKRGIIVGTTHLFWHPFGTFERTRQCYVMLNKMKEFMHRIN 275

Query: 197 QKKESLVPF------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
             ++              GDFN +           K +          +   S   +
Sbjct: 276 VLQDKGATQENLWYPFFCGDFNSQPFDTPYLSVSSKPVTYKGRAKTVIECSTSYTFS 332


>gi|147902860|ref|NP_001090474.1| hypothetical protein LOC779387 [Xenopus laevis]
 gi|83405601|gb|AAI10749.1| MGC130968 protein [Xenopus laevis]
          Length = 257

 Score = 52.2 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 65/204 (31%), Gaps = 19/204 (9%)

Query: 23  KVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              ++S+NI    L E         +  +   +     + +  ++++ADI+ LQE+   +
Sbjct: 37  DFSVLSYNILSQDLLEDNSHLYGHCRRPLLSWSFRLPNILKELEDMNADILCLQEVQENH 96

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              ++ P      ++       +  R  N     AI  +     ++  +       +   
Sbjct: 97  YQTQIKPSLESLGYHCE-----YKTRTGNKPDGCAICFKSNKFSLVSATPVEYYRPNMAL 151

Query: 139 RAGNRRAVELLVEINGKK----IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              +   + LL++   ++    I V + HL                 + L+     +   
Sbjct: 152 LNRDNIGLVLLLQPKFQRAAPVICVANTHLLYNP------KRGDIKLTQLAMLLAEIARV 205

Query: 195 ITQKKESLVPFVIAGDFNRKINYL 218
              K     P V+ GD N      
Sbjct: 206 AFTKDTGFCPIVLCGDLNSVPGSP 229


>gi|255007858|ref|ZP_05279984.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis 3_1_12]
          Length = 313

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 73/312 (23%), Gaps = 78/312 (25%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           +  +      L+ DIV   E+ +Y+    +                       N+ +   
Sbjct: 14  FEAIADEVARLEPDIVMFSEVRNYHGKQFI------SRILQALEERGKRYYGENSKLDVG 67

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF------ 167
           I  + K      +  P    +D          ++  + ING+ + V   HL         
Sbjct: 68  ILSKYKIE----EQAPNCPLEDDAG-----SVLKARIRINGRDVVVYSAHLDYTHYACYL 118

Query: 168 CFLDSLENTYSPSCSLLSQQA-----------QWLKDWI-TQKKESLVPFVIAGDFNRKI 215
               S          +L               + ++  I   +KE     ++ GDFN   
Sbjct: 119 PRGYSGVTWKKLDAPVLDVAVIEKANNESLRDEAIRHVIEDARKEKGNIVLLGGDFNEPS 178

Query: 216 NYLGNN-------------DDFWKTIDPNDSLIRF--PKEKDSRCNANKNL--------- 251
           +   N                    +  N         K  +   +              
Sbjct: 179 HLDWNENTKKLWDHNGTVVRWDCSVLLENAGFKDAYRTKYPNPITHPGFTFPSDNEGIAV 238

Query: 252 ---------RNKIPIDYFVMDQNAYKFLIQESFS------------EILYNEDDIKSRGK 290
                      +  ID+     +    L   S              E    +  I   G 
Sbjct: 239 EKLSWAPDADERDRIDFIYFRPDKKLKLKDVSVVGPSKSIVRSKRIEERSKDLFITPLGV 298

Query: 291 RLSDHCPISIDY 302
             +DH  +   +
Sbjct: 299 WPTDHKAVMATF 310


>gi|118367256|ref|XP_001016843.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
            thermophila]
 gi|89298610|gb|EAR96598.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
            thermophila SB210]
          Length = 1639

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 87/320 (27%), Gaps = 58/320 (18%)

Query: 18   ASVAQKVRLVS--WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQE 73
             S  + +R+ +  WN++     +              +   +  +         ++  QE
Sbjct: 1326 PSQTKYLRIATLTWNLHGSCPTD--------------NLAEILAFLNQASHHLVVIGTQE 1371

Query: 74   MGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV--LQQSYPL 130
                 A +     K+ W          ++ K  S       + V    +    ++     
Sbjct: 1372 CERSIAASFFNSSKSKWEQAILDNMSNSYVKVHSLKMNALHLIVLSHKILRPYIKNIQSD 1431

Query: 131  LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
              A    +  GN+  + +  +I  +    +++HL S        N    S        + 
Sbjct: 1432 KRATGIANYLGNKGGLGISFDIGKRSYLFVNLHLSSGKENKERRNKDFLSVENYLNLGKQ 1491

Query: 191  LKDWITQKKESL----VPFVIAGDFNRKINYLG--------------NNDDFWKTIDPND 232
            + +     ++ +          GD N +IN                  +D   + I+   
Sbjct: 1492 ISNMERSSQDRVSNRFDYVFFIGDMNYRINIDIGNKDIHEHNYIQLLLHDQLIQEIELIA 1551

Query: 233  ----------SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282
                                +R    K  R     D  +      K   Q +  +I Y+ 
Sbjct: 1552 SDFKEGMITFPPTYKLDLTYNRFYTGKKKRQPAWTDRILY-----KSYKQNTMFQISYDS 1606

Query: 283  DDIKSRGKRLSDHCPISIDY 302
            +         SDH P+   +
Sbjct: 1607 NT----NIMGSDHRPVYAQF 1622


>gi|294675641|ref|YP_003576256.1| hypothetical protein RCAP_rcc00084 [Rhodobacter capsulatus SB 1003]
 gi|294474461|gb|ADE83849.1| conserved hypothetical protein [Rhodobacter capsulatus SB 1003]
          Length = 327

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/346 (10%), Positives = 83/346 (23%), Gaps = 72/346 (20%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           +  VF  +P   + A+ +RL +++   LS      +     K      T          A
Sbjct: 1   MIAVFLGLP---AAAETLRLATFS-PGLSRPGPGLVLAALQKGNDPQITAAIALIAEAKA 56

Query: 67  DIVFLQEMG------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN------------ 108
           D++ L ++       +  A+ +          ++     N       +            
Sbjct: 57  DVLLLTDLDWDYRAEALGALQRRLAGQGLDYPFAHAPQPNTGNDTGFDIDGNGRFSEPRD 116

Query: 109 -------DIHTAIAVRKKNVRVLQQS-------YPLLGAKDSFSRAGNRRAVELL----- 149
                       +A+  K   +  Q+       +  L             A  +      
Sbjct: 117 AQGYGQFTGQHGLALLSKRPILTDQARDFSAFLWADLPGSQLPQADLPEGAGAVQRLAST 176

Query: 150 ------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 V+     + +      +  F    +     +    +    +L         S  
Sbjct: 177 AFWDVPVQTGAGALHIWAYAATTPVFDGPEDRNGRRNADETAFWRHYLAR-----AGSSA 231

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--IRFPKEKDSRCNANKNLRN-----KIP 256
           PFV+ G  N   +         + +  +  L   R         +             + 
Sbjct: 232 PFVLMGLANLDPDRGEGQRAAMRKLLADPRLQDPRPTATDAPAGHPLATADFGGTVGPLR 291

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +DY +    A   +                    R S H  + +D 
Sbjct: 292 VDYIL--PAAGLKVQAAG-----------TLGDPRASKHRLVWVDL 324


>gi|308450859|ref|XP_003088455.1| hypothetical protein CRE_07944 [Caenorhabditis remanei]
 gi|308247226|gb|EFO91178.1| hypothetical protein CRE_07944 [Caenorhabditis remanei]
          Length = 635

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 5/163 (3%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVF 70
              A  +++VR+ ++N+        + +  +    T +++      +    K +DAD+  
Sbjct: 455 TVLAKESKQVRVAAFNVLNYDNSPLIGVKPDRGANTETEFNRQHAKIVSAIKTIDADVYG 514

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           L E+ +     K           +  + +     D       A+A+   + RV     P+
Sbjct: 515 LMEIANNGYGEKSAVNYLTKALGADWKYVIPPNMDKLGTDVIAVAIIYNSKRVKPVGNPV 574

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           +   D   +     A        GK   V+  HLKS       
Sbjct: 575 VYD-DLTQKNRVTMAQSFQAVTGGKTFTVVPNHLKSKGSCPDD 616


>gi|307702382|ref|ZP_07639339.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037]
 gi|307624059|gb|EFO03039.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037]
          Length = 219

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/237 (9%), Positives = 55/237 (23%), Gaps = 50/237 (21%)

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
            +        S ++     +       K       S+P +GA  S      R      + 
Sbjct: 7   LFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGRI-----IT 60

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
           +  ++ +V  ++  +                  ++    L        +   P +  GD+
Sbjct: 61  LEFEEFFVTQVYTPNAGDGLKRLEERQVWDVKYAEYLAQL--------DKEKPVLATGDY 112

Query: 212 N---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254
           N               R   +       +  +        F                +  
Sbjct: 113 NVAHKEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHLHGDVPECYTWWAQRSK 172

Query: 255 --------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     IDY++        + +    +    +           DH PI ++ +
Sbjct: 173 TSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPIVLEIE 218


>gi|301609554|ref|XP_002934320.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase A
           [Xenopus (Silurana) tropicalis]
          Length = 787

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/330 (13%), Positives = 83/330 (25%), Gaps = 62/330 (18%)

Query: 20  VAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
             +  R  +++WN+        ++       R              +D  ++ LQE+ S 
Sbjct: 199 AGKDFRIYVITWNVGCAVPPSDLTSLLCLNARDDK-----------IDMFVIGLQEVNSM 247

Query: 77  -YNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRV--LQQSYPLLG 132
               +      + W   +       ++    S       + V  K   +  L+       
Sbjct: 248 INKRLKDALFSDQWSEVFMDVLSPFSYVLVSSVRMQGCLLLVFSKYFHLPFLRDIQTDCT 307

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                   GN+  V + + + G  +  L+ HL +             S      Q Q  +
Sbjct: 308 RTGLGGYWGNKGGVSIRLSLFGHMVCFLNCHLPAHMENTDQRVDNFESI----LQLQQFQ 363

Query: 193 DWITQKKESLVPFVIAGDFN--------------------------RKINYLGNNDDFWK 226
             +             GD N                           ++N     +    
Sbjct: 364 GPLANGVLDHDLVFWFGDLNFRIEDLDLHFVKSAIQGNKLALLWEKDQLNMAKIFEPVLN 423

Query: 227 TIDPNDSLIRFPKEKDSRCNAN---KNLRNKIPIDYFV------MDQNAYKFLIQESFSE 277
                        + D   N        R     D  +      + Q+  K L   S   
Sbjct: 424 GFMEGSLTFPPTYKFDVGTNTYDTSSKKRKPAWTDRILWKMKCPITQSPAKQLGTISTRS 483

Query: 278 ILYNEDDIKSRGKRL----SDHCPISIDYD 303
              +   + S G  +    SDH P+S  + 
Sbjct: 484 KELSV-TLLSYGSHMQYTESDHKPVSAIFS 512


>gi|241956622|ref|XP_002421031.1| RNA exonuclease, putative; rRNA processing protein, putative
           [Candida dubliniensis CD36]
 gi|223644374|emb|CAX41187.1| RNA exonuclease, putative [Candida dubliniensis CD36]
          Length = 497

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 62/242 (25%), Gaps = 18/242 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++S+NI   +         N    + +    +L    K+ +ADI+ LQE+       
Sbjct: 92  SIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQILLDELKHYNADIMCLQEVDKVQYEG 151

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRA 140
               +     + +     N             + V + ++   L Q      ++     A
Sbjct: 152 FWVSQLEKLGYSTRFYRNNTKNHGCVIVFREKLFVCKHQSFIRLDQDLNQEASEKQLPPA 211

Query: 141 G---NRRAVELLVEI------------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                  A    +E                   +   HL    F        +       
Sbjct: 212 RIATTNIAFMAYLEFTPAFVKEYPCLKETNGFIIGTTHLFWHPFGTYERTRQTYMLLYKF 271

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           ++ Q +   I             GDFN +           K I  +           +  
Sbjct: 272 KEFQRVLRII-VGNSKRFYSFFTGDFNSEPFDAPYRAITAKPIKFSGRSKNVLGCSLAYT 330

Query: 246 NA 247
            +
Sbjct: 331 YS 332


>gi|84684472|ref|ZP_01012373.1| hypothetical protein 1099457000260_RB2654_12644 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667451|gb|EAQ13920.1| hypothetical protein RB2654_12644 [Rhodobacterales bacterium
           HTCC2654]
          Length = 337

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/339 (10%), Positives = 88/339 (25%), Gaps = 67/339 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ------EMGSYNA 79
           + ++  +    ++G  L  + +         + +     DADI+ L       E  +  A
Sbjct: 3   VATY--DAELYRDGPGLLLDDILDGDPQVEAVAEVIAYADADILHLTGFDWDLENHALTA 60

Query: 80  VAKVFPKN---TWCIFYSTERLINHSKRDSNNDIHTA----------------IAVRKKN 120
            A+V          ++ S       S  D + +                    +A+  + 
Sbjct: 61  FARVLANQGATYPYLYASQPNTGVPSGVDLDGNGRVGEARDSFGYGSFTGQGGMAILSRY 120

Query: 121 VRVLQQSYPLLGAKDSFSRAGNR--------------------RAVELLVEINGKKIWVL 160
                + +  +   +       R                       ++ +++ G  + +L
Sbjct: 121 PIGEVRDFSQMLWAELPDNHAPRVDGLPFPSEEASKVRRLSSVGHWDVPIDVAGTTLHLL 180

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-NYLG 219
             H  +  F    +   +          + L   +        P V+ G  N    +  G
Sbjct: 181 AWHGSTPVFDGPEDLNGARGADEAMFWIKLLNGSLPFPPPEG-PVVLTGISNIDPVDGDG 239

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---------------RNKIPIDYFVMDQ 264
            +    + +         P        AN                     + +DY + D 
Sbjct: 240 RHVTMARILRDPLIQDPMPTSAGGSAAANPGHAGDPALDMADFDDPLPGNLRVDYVLPDA 299

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +  S       ++ +    +  S H  + ++ D
Sbjct: 300 RLR---VLASGVVWPAPDEPMAETVETASRHRIVWVEVD 335


>gi|322823012|gb|EFZ28885.1| hypothetical protein TCSYLVIO_4875 [Trypanosoma cruzi]
          Length = 535

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/241 (12%), Positives = 60/241 (24%), Gaps = 20/241 (8%)

Query: 33  TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92
                  V        +       L    +  D DIV LQE+        ++    +C +
Sbjct: 136 YYPYDPSVDKELPPFLQPDFRRAYLVNEIRYYDPDIVCLQEVNRVFFNDVLWKYIRYCGY 195

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-------------PLLGAKDSFSR 139
            +  +     K  +       +  R K      +                L+  KD    
Sbjct: 196 GTLYQSSRGYKVRALRRGDNPLLPRHKGKIEEAEDIGNVVLFHKGRFVPILMPGKDLVQN 255

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                 V +  +I    + V+ +   +    ++ +     +   L      L        
Sbjct: 256 LHFAHVVAMRDKITNMTLNVVCVQYTAGESKEAAKIRLHEARQTLQV-LDALNR--NDTD 312

Query: 200 ESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
            + +  VI GDFN   +         + F+   D            +      K  +   
Sbjct: 313 RAHMSNVICGDFNNVHDEEACVQLMRERFFSMHDVVGGPRWTTWFHEDAQTCAKYQKYYA 372

Query: 256 P 256
            
Sbjct: 373 R 373


>gi|255535891|ref|YP_003096262.1| hypothetical protein FIC_01757 [Flavobacteriaceae bacterium
           3519-10]
 gi|255342087|gb|ACU08200.1| hypothetical protein FIC_01757 [Flavobacteriaceae bacterium
           3519-10]
          Length = 359

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 75/282 (26%), Gaps = 61/282 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           AQ ++++S NI   +                  Y    Q  +N   D+    E  S  A 
Sbjct: 95  AQTIKVISANIYQFNS----------------KYEKFHQLIRNYSPDVFITFE--SNAAW 136

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +          ++ +  + ++                     L    P   A+  F  A
Sbjct: 137 EEANRTLEKEYPHTQKMTLENTYGMH-----------------LYSKIPFDSAQFHFFVA 179

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +  +VE+    +    +VL               +      LL      L   I     
Sbjct: 180 EDIPSVEVHFTTSEGHKFVLFGVHPPPPSPTEERTSKERDGDLL-----ALAKRIKAM-- 232

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             +P ++ GDFN            ++     + +              K    ++P+D  
Sbjct: 233 -DLPSLVIGDFNTVAWSDT--SILFRKTS--ELIDARVGRGILATFHAKYWFFRVPLDLL 287

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               +                 + +++     SDH PI   +
Sbjct: 288 FHSPDIM--------------IEKLQTLEDIGSDHFPIYCAF 315


>gi|239942303|ref|ZP_04694240.1| hypothetical protein SrosN15_15000 [Streptomyces roseosporus NRRL
           15998]
 gi|239988768|ref|ZP_04709432.1| hypothetical protein SrosN1_15772 [Streptomyces roseosporus NRRL
           11379]
 gi|291445762|ref|ZP_06585152.1| predicted protein [Streptomyces roseosporus NRRL 15998]
 gi|291348709|gb|EFE75613.1| predicted protein [Streptomyces roseosporus NRRL 15998]
          Length = 255

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 78/283 (27%), Gaps = 53/283 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82
           +R+ +WN+       G  L ++  +              +   D++ LQE   Y+   + 
Sbjct: 6   LRIATWNM------GGGILGESHQRDGIPSLDYYASVLADHRPDVLCLQEAHDYDGRRES 59

Query: 83  ----VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +  +  +  F S    ++H  +D++  +   I  R    + + + +P      +  
Sbjct: 60  QSEYLARRLEYAHFLSFPLSVSHMSKDASLAL--GILSRFPIAKTVYKRFPRPQLVGTGP 117

Query: 139 RAGNRRAVE------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           R   R A+         + +  + +  ++ H        +     + +       A  L 
Sbjct: 118 RGE-RWALHDKGYMVGSIALGDRMLGFVNGHCFPLRRFGASATEPAFAPVWAMLTADLLA 176

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                          A D N         +     + P      F     +     K   
Sbjct: 177 ------VGGTGTAFAALDANHG----RIGEVLGDVLGPGHYRSAFEATPTTPGGGQK--- 223

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                D+ +  +         + +E               SDH
Sbjct: 224 -----DHILYGRALRLLSTTVAATE---------------SDH 246


>gi|297201073|ref|ZP_06918470.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
 gi|197712142|gb|EDY56176.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
          Length = 315

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/283 (9%), Positives = 63/283 (22%), Gaps = 69/283 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
             R+++ N+      +                  L    +    D+VF++E        +
Sbjct: 95  SFRVITSNVEFGRATD-----------------ALVAAVREEKPDLVFVEECEYGCSATL 137

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +   +                +R       T   +  +       +          + A
Sbjct: 138 RRSLSE------------GYPYRRSVEGAGSTGSVLLSRFPLQPAAAIRGSTMGMPGAVA 185

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R                + + L         +              + L         
Sbjct: 186 DVRG-------------HAVRLQLAHPMPPLPGQLDG---------WRRELGKLRDFAAT 223

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
           +  P V+AGDFN   ++          +     L    +           +     ID+ 
Sbjct: 224 TRSPTVLAGDFNASQDHAAFRAILDTGLRDAARLAGSGRTPTWPARTAPAIG--AQIDHV 281

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ++  +                  D +      +DH  + +D  
Sbjct: 282 LVSADFSAR--------------DARFLDLADTDHRALLVDIT 310


>gi|168024169|ref|XP_001764609.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684187|gb|EDQ70591.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 847

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 79/282 (28%), Gaps = 55/282 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R++++NI     + G             +Y  +          I  LQE  + + V  
Sbjct: 620 ELRVLNFNIQQGFSRSGS-----------VNYDSIYNMLDVERPHITTLQETDTMHIVH- 667

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                    F++T+  +      +        A+      V  QS  L       +    
Sbjct: 668 --GNLDLVDFWATKLKLYSWYAPATKADTWGCAILSTQKLVHGQSQVLPSPHGENACFQQ 725

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                  ++  GK I +++ H                    +  QA  +   +       
Sbjct: 726 -----ADLQFQGKSIQIMNTHFGVLSSD-------------IKLQAAAIASVVNL----T 763

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V++GDFN        N      I  +  +   P +     +    L           
Sbjct: 764 RPLVLSGDFNMAPLTDAYNTTVASGILDSYVVQNGPWKSPGDRDPGAGL--------VFS 815

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                  L   S+ E  Y++          SD  PI   +DF
Sbjct: 816 SP----KLKCVSWKEPYYDQTKT-------SDGYPIVATFDF 846


>gi|92111129|gb|ABE73456.1| endonuclease/reverse transcriptase [Pan troglodytes]
          Length = 1275

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/279 (9%), Positives = 67/279 (24%), Gaps = 48/279 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ N+N L+                     L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNVNGLNSP--------------IKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKRAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +      ++   S     L      + D++     +L 
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAPRFIKQVLSDLQRDLDSHTLIMGDFLNTPLSTLD 155

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
                       +    N    +    +      PK  +    +  +      ID+ +  
Sbjct: 156 RSTRQ---KVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTY-SKIDHILGS 211

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +       +                   LSDH  I +  
Sbjct: 212 KALLSKCKRTEIIT------------NYLSDHSAIKLVL 238


>gi|88856584|ref|ZP_01131241.1| hypothetical protein A20C1_02524 [marine actinobacterium PHSC20C1]
 gi|88814238|gb|EAR24103.1| hypothetical protein A20C1_02524 [marine actinobacterium PHSC20C1]
          Length = 239

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 78/278 (28%), Gaps = 60/278 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++S+N+                 R     T L   A+  + D + LQE+ +       
Sbjct: 2   IRVISYNL-----------------RKHRAVTELAALAETPNLDALCLQEVSAAE----- 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            P     +  +     N                   +  + +  +  + +  S    G+R
Sbjct: 40  LPAEIGNLHLADSTKNNRLGLAIYYRRERYEQTASNSFELKKSLHDRVFSPTSERLLGSR 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                    +G ++ +   H      L+S          L   Q +   + +     S  
Sbjct: 100 LVD----RDSGHELVLASFHAAPLTALNS----------LRRNQIKAAHELLQT-LGSGS 144

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GD+N  +        F   +        +      R         +   D+    
Sbjct: 145 PILMVGDYNYPL--------FKDGLSERVKKTGYDLSLSDRMTYTNYKFFRGHFDFV--- 193

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                       +   +  + +++  +  SDH PI + 
Sbjct: 194 ------------TSQGFTIEGVETLARGSSDHLPILVT 219


>gi|298231117|ref|NP_001177208.1| phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2 [Sus
           scrofa]
 gi|295646227|gb|ADG23056.1| SH2 domain-containing inositol-5'-phosphatase 2 [Sus scrofa]
          Length = 1264

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++     V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 434 IGTWNMGSVPPPRNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 491

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 492 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 547

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 548 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLGAFDISLRF-- 605

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 606 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 662

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +   +    +I  S+         
Sbjct: 663 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILWKSHPETHIICNSY--------- 713

Query: 285 IKSRGKRLSDHCPISIDYD 303
             +     SDH P+   ++
Sbjct: 714 GCTDDIVTSDHSPVFGTFE 732


>gi|255945257|ref|XP_002563396.1| Pc20g09000 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588131|emb|CAP86229.1| Pc20g09000 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1102

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 82/319 (25%), Gaps = 69/319 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEM--------- 74
           + S+N+N   E  G  L       +            + D  I  V  QE+         
Sbjct: 605 VGSFNVNGRDEGPGTDLTPWLFPESDE---------SDEDPAIFVVGFQEIVALSPQQIM 655

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKNVRVLQQSYPLL-G 132
            +  +  KV+ +       +   +    K     +      AV         +    + G
Sbjct: 656 STDPSTRKVWERAVHDCLNTHSEMKGTGKYVHLRSGQLVGAAVLLYVKEDSLKYIKNVEG 715

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +      AGN+    +  + +   +  +  HL +        N             Q L+
Sbjct: 716 STGLSGVAGNKGGCAVRFDFSNTSVCFVTAHLAAGFANYDERNRDYEIID------QGLR 769

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIR 236
               +        +  GDFN +I                     ND     +        
Sbjct: 770 FQKNRSIADHDAVIWLGDFNYRIGLDNPSVRELILQRDYQRLYDNDQLNLQMVAGRVFQF 829

Query: 237 FPKEKDSRCNANKNL--------RNKIPI----DYFVMDQNAYKFLIQESFSEILYNEDD 284
           + +         K            K  I    D  +   N        +  +  Y   D
Sbjct: 830 YSEGPIEFPPTYKYDVGGDNYDTSEKARIPAWCDRILWRGN--------NLRQTNYQTAD 881

Query: 285 IKSRGKRLSDHCPISIDYD 303
           +     ++SDH P+   +D
Sbjct: 882 L-----KVSDHRPVWATFD 895


>gi|257058980|ref|YP_003136868.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8802]
 gi|256589146|gb|ACV00033.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 8802]
          Length = 457

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 37/117 (31%), Gaps = 13/117 (11%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWN-----------INTLSEQEGVSLWKNSVKRTTS 52
              +++   L+   A  A   R+ ++N           I  LS       +        +
Sbjct: 13  SLTISVTLTLLSSMAQAASTFRIATYNTSLSPNAQNALIQALSIAPNDPEYNTDPLAIQA 72

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
               + +  + +D DI+ L E         +  +     + S  + I+ +   +  +
Sbjct: 73  R--QIAEVIQRIDPDIILLNEFNYDPNNPTLAAELFQQNYLSVGQNISGNSAANPIN 127


>gi|323357343|ref|YP_004223739.1| exonuclease III [Microbacterium testaceum StLB037]
 gi|323273714|dbj|BAJ73859.1| exonuclease III [Microbacterium testaceum StLB037]
          Length = 232

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 82/278 (29%), Gaps = 60/278 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+                 R       L +       D++ LQE  + +   ++
Sbjct: 3   MKVISYNL-----------------RKHRAAGELSRLVDEHAVDVLCLQECDTRDIPVEI 45

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     +     N          +T  AV  + + + +  +  +         G R
Sbjct: 46  AGLR-----LAEATQRNRLGLAVYYRENTFRAVEVRAIALKKSLHDYVLKPAEERMLGVR 100

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               L    +G+++ V   H      L+S          L   Q +     + Q     +
Sbjct: 101 ----LRDIDDGREVIVASFHAAPLTALNS----------LRRHQIRTALSEL-QNLGPGL 145

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GD+N           F + +        +           +    +   D+    
Sbjct: 146 PALMVGDYNYP--------VFKEHLGQKVRDQGYELTLSDARTYTRYRFFRGHYDF---- 193

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                       + + ++   I++  + LSDH PI I 
Sbjct: 194 -----------ATSVGFDIAHIRTLPQGLSDHLPILIT 220


>gi|301793781|emb|CBW36169.1| putative integral membrane protein (possible nuclease activity)
           [Streptococcus pneumoniae INV104]
 gi|332204605|gb|EGJ18670.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Streptococcus pneumoniae GA47901]
          Length = 333

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 83/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IA DFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIADDFNATM----RHGALAKISSHRDALNVLPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + SDH  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333


>gi|296232072|ref|XP_002761417.1| PREDICTED: synaptojanin-1 isoform 2 [Callithrix jacchus]
          Length = 1529

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 523 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 582

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 583 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 642

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 643 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 696

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 697 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 756

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQE 273
              +       F + K +     K                    D  +  +  + F    
Sbjct: 757 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 816

Query: 274 SFSEI---LYNEDDIKSRGKRL-------------SDHCPISIDYD 303
              ++    + +D                      SDH P+    D
Sbjct: 817 EDLDLLNASFQDDSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 862


>gi|296232070|ref|XP_002761416.1| PREDICTED: synaptojanin-1 isoform 1 [Callithrix jacchus]
          Length = 1610

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 563 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 622

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 623 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 682

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 683 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 736

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 737 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 796

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQE 273
              +       F + K +     K                    D  +  +  + F    
Sbjct: 797 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 856

Query: 274 SFSEI---LYNEDDIKSRGKRL-------------SDHCPISIDYD 303
              ++    + +D                      SDH P+    D
Sbjct: 857 EDLDLLNASFQDDSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 902


>gi|169246073|gb|ACA51050.1| synaptojanin 1 isoform a (predicted) [Callicebus moloch]
          Length = 1577

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRNKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQE 273
              +       F + K +     K                    D  +  +  + F    
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 274 SFSEI---LYNEDDIKSRGKRL-------------SDHCPISIDYD 303
              ++    + +D                      SDH P+    D
Sbjct: 822 EDLDLLNASFQDDSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|167427265|gb|ABZ80244.1| synaptojanin 1 isoform a (predicted) [Callithrix jacchus]
          Length = 1575

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQE 273
              +       F + K +     K                    D  +  +  + F    
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 274 SFSEI---LYNEDDIKSRGKRL-------------SDHCPISIDYD 303
              ++    + +D                      SDH P+    D
Sbjct: 822 EDLDLLNASFQDDSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|254578770|ref|XP_002495371.1| ZYRO0B09702p [Zygosaccharomyces rouxii]
 gi|238938261|emb|CAR26438.1| ZYRO0B09702p [Zygosaccharomyces rouxii]
          Length = 1362

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 85/320 (26%), Gaps = 60/320 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQE 73
            T+     + + ++N+N  S    +S W   +                   DIV   LQE
Sbjct: 561 FTSYSTTNILVGTFNVNGTSRHADLSKWLFPIG-------------DKFKPDIVVLGLQE 607

Query: 74  MGSYNAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           +   +A + +    +   F+           +      + +  + +     V+     ++
Sbjct: 608 VIELSAGSLLNADYSKGSFWENMVNKCLNQYDEKYLLLRVEQMSSLIILFFVKADKAHMV 667

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +Q              GN+ AV +  E  G     ++ H  +         +   S    
Sbjct: 668 KQVEGATKKTGFGGITGNKGAVAIRFEYGGTSFCFVNAHFSAGANNIDERRSDYESI--- 724

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN-------------------NDDFW 225
               + +    ++           GD N +I                         D   
Sbjct: 725 ---VKNIIFTRSKTIPHHDSIFWLGDLNYRIILPNEEVRRELSAKKEGYIERLLRYDQLT 781

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
           + I+       F +         K   N    D      ++ K         I+Y   ++
Sbjct: 782 QEINTGVVFQGFREPTLKFRPTYKYDNNTDNYD------SSEKARTPSWTDRIVYKGTNL 835

Query: 286 KSRGK-----RLSDHCPISI 300
                      +SDH P+  
Sbjct: 836 HPLAYSDAHLIISDHRPVYA 855


>gi|147844534|emb|CAN79990.1| hypothetical protein VITISV_021024 [Vitis vinifera]
          Length = 1226

 Score = 52.2 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  ++    +           F + +D  + +    +      +   + +
Sbjct: 473 GEPWCVGGDFNIILSQGERSRQGRVTSAMRRFAQVMDELELIDLPLQGGSFTWSGGLHNQ 532

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F++  +              ++    K   + +SDH PI I+
Sbjct: 533 AWARLDRFMVSPS----------WLDQFSNVTQKRLSRPISDHFPIIIE 571


>gi|125585545|gb|EAZ26209.1| hypothetical protein OsJ_10076 [Oryza sativa Japonica Group]
          Length = 436

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 81/307 (26%), Gaps = 42/307 (13%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV------A 81
           +WN+  ++  + + L      R               D  ++  QE+   +A        
Sbjct: 93  TWNVGGVAPPDDLDLSDWLDTRN-----------AAYDIYVLGFQEVVPLSARNVLGADK 141

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK----------------NVRVLQ 125
           K        +  +     + S  +S+ D   A                      + +V +
Sbjct: 142 KRVGMRWNELVRAALNRSSPSAPNSSRDQREAKGTGCGAAAAAPGGGEIKQQAAHQKVHR 201

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-- 183
               + G     +    R  V +   ++     V   HL S      + +  + +  +  
Sbjct: 202 VRGGIGGVCGELACRDYRAPVSVRFWLHDTSFCVACCHLASGGRDGDVAHRNADATEILS 261

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            +   +     + QK       ++ GD N +I+           ++          E   
Sbjct: 262 RTTFPRGHSLNLPQKILDHDRVILLGDLNYRISLPEAKTSCEAQVESEGGAFHGWNEGAI 321

Query: 244 RCNANKNLRNKIPIDYFVMDQN-------AYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             +            Y             A  +  +  +      +        RLSDH 
Sbjct: 322 AFSPTYKYYPNSDTYYGCASHGRKGEKRRAPAWCDRILWRGAGLKQKRYDRCESRLSDHR 381

Query: 297 PISIDYD 303
           P+   ++
Sbjct: 382 PVRALFE 388


>gi|300932899|ref|ZP_07148155.1| putative exodeoxyribonuclease [Corynebacterium resistens DSM 45100]
          Length = 344

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 58/208 (27%), Gaps = 23/208 (11%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA 81
            + + + N+N +           + +R+ ++   +  + +   AD+V +QE+  +     
Sbjct: 2   TLTVATVNVNGIRA--------AAKQRSETNL-GILPWLEQTRADVVLMQEVRANQKQTE 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                     ++  +   +   R         I  R     V+             +  G
Sbjct: 53  AALAPAIEAGWHLAQAEASAKGRA-----GVGILSRLPLTHVVTGFGHAEEQAGLTASPG 107

Query: 142 NRRA------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
            R        +E  V  +   + V  ++L S       ++             Q      
Sbjct: 108 AREFDDSGRYIEARVNASFGPVTVASLYLPSGAADTEKQDEKYRFLDSFGHFMQQ--RAA 165

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD 223
           +         +I GD+N         + 
Sbjct: 166 STVDGKPENMIIGGDWNICHRRADLKNW 193


>gi|88856774|ref|ZP_01131428.1| hypothetical protein A20C1_13206 [marine actinobacterium PHSC20C1]
 gi|88813942|gb|EAR23810.1| hypothetical protein A20C1_13206 [marine actinobacterium PHSC20C1]
          Length = 337

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 84/301 (27%), Gaps = 56/301 (18%)

Query: 6   VLALVFFLVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           VLA   F  P   + A   V ++SWN   L E  G +               +   A   
Sbjct: 87  VLATRGFGSPGFETKADSDVTVLSWNT--LGEAPGAT--------------AVADLALVN 130

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           +AD+V L E                  F   + L    +    + +      + ++  VL
Sbjct: 131 EADVVTLPETTRE------------FGFEVAQLLSAAGRPMWVHTLAYDEISKSRSTTVL 178

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
                     D+ +R  +     +    +G    ++ +   +   +    + +      L
Sbjct: 179 ISVDLGEYDVDTSTRTTSTLPSLVATPQDGVGPTIVAV--HAVAPITGEMSNWRSDLEWL 236

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDS 243
           ++Q +                ++AGDFN  I++     D     +               
Sbjct: 237 AEQCR------------STNVIMAGDFNSTIDHYASLTDGSEYALGSCRDAASVSDNAAV 284

Query: 244 RCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +       PID+ +       + +        ++           SDH PI    
Sbjct: 285 GTWPTQLPSLLGAPIDHVMASSE---WTVTGMRVIESHDG--------FGSDHRPILATL 333

Query: 303 D 303
            
Sbjct: 334 S 334


>gi|300934224|ref|ZP_07149480.1| hypothetical protein CresD4_09149 [Corynebacterium resistens DSM
           45100]
          Length = 311

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 76/314 (24%), Gaps = 68/314 (21%)

Query: 1   MIRKYVLALVFFLV-----PCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           M+   V+A++   +       +   +   +R++S N       +                
Sbjct: 53  MVVFAVIAILAASIVPRIPAFSLFQSTPMLRVMSLNTYFGGAVD---------------- 96

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           T +      ++ D++ L E  +    + V       +    +                  
Sbjct: 97  TEIADIVNEVNPDVLILAET-NPLEASAVARATDMRVMTDVDPGDGAD----------GT 145

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  KN  + +       AK        R    + +     +                  
Sbjct: 146 TMLAKNDWIDRSEAQASLAKGITRFQMPRVTANVAIPSEDGQ-----ASSARRHVELYGV 200

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKE----SLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
           +  +P+       A  L++           +    VIAGDFN   ++             
Sbjct: 201 HALAPAGHDRGPWASELENISKMVGNDPGHNGRNMVIAGDFNATRSHP--------RFRE 252

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            D          +    +K     I ID+ +   +        +                
Sbjct: 253 IDLKDCTGHMAHTPTWPSKFP--VIRIDHVLTSGSCTG---GGTIKVKGT---------- 297

Query: 291 RLSDHCPISIDYDF 304
              DH  +  D  F
Sbjct: 298 ---DHRAVWADIAF 308


>gi|262374125|ref|ZP_06067402.1| endonuclease/exonuclease/phosphatase [Acinetobacter junii SH205]
 gi|262311136|gb|EEY92223.1| endonuclease/exonuclease/phosphatase [Acinetobacter junii SH205]
          Length = 381

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/250 (11%), Positives = 59/250 (23%), Gaps = 45/250 (18%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
            Y LL ++   L  D+V   E  S           +W             +     D   
Sbjct: 115 KYHLLLEHIDTLKPDVVLTLESDS-----------SWQNALVNIEQDYPYRVPVPLDNLY 163

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            + +  +      +   +L  +           +   + ++   + V    L       +
Sbjct: 164 GMHLYSRLPLHDTEVKFILSDEIPS--------IHTTLTLSSG-LKVQLYCLHPKPPSPT 214

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                +   + L      +KD            ++ GD N            ++ I    
Sbjct: 215 EAKDSTLRDAELLIVGDQIKDL-------DQSCIVMGDLNDVAWSRTTR--LFQRIS--G 263

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            L                   +  +D+                    +   D+K      
Sbjct: 264 LLDPRVGRYFMNTFHADYPLLRWSLDHIFHS--------------TDFALVDMKRLAHIG 309

Query: 293 SDHCPISIDY 302
           SDH PI +  
Sbjct: 310 SDHFPIYVVL 319


>gi|327190501|gb|EGE57597.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CNPAF512]
          Length = 339

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 60/245 (24%), Gaps = 56/245 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
            RL+S+NI             N    T      L       +AD+V L E       + +
Sbjct: 118 FRLMSFNI----------AIDNWKNST-----ALADMVIASNADVVNLLEAKPLTFHLQR 162

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F    + I               N        V  K   V++Q   +   +        
Sbjct: 163 LFKAYPYHI------------GCDNGKDSCDTLVLSKRPFVMRQVASIGSLRKDR----- 205

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   V+  G+ I ++  HL    + D               Q   L D         
Sbjct: 206 --LVVSSVDFGGQAINIVSAHLSKPYYDD--------------YQMGELDDLGKALGTIS 249

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V++GDFN                             +            I ID+   
Sbjct: 250 GPLVLSGDFNSSAIAPSIQGLLRDQ-------KLQTLAPEPATWPIAAGAFGIAIDHIFA 302

Query: 263 DQNAY 267
                
Sbjct: 303 RAPLR 307


>gi|313608204|gb|EFR84229.1| exodeoxyribonuclease III [Listeria monocytogenes FSL F2-208]
          Length = 102

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 26/97 (26%), Gaps = 20/97 (20%)

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNA 266
            +       +        +  F        +A      +           IDYFV+ +  
Sbjct: 16  GFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERL 75

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              L+       +             SDHCP+ ++ +
Sbjct: 76  KDKLVDAKIHADVL-----------GSDHCPVELELN 101


>gi|299783524|gb|ADJ41522.1| Endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           fermentum CECT 5716]
          Length = 332

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 79/286 (27%), Gaps = 50/286 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQ-------EGVSLWKNSVKRTTS-----------DYTL 56
             T +  +     ++N+   +         +   L   +  R              D   
Sbjct: 49  AATLTTGKVYTATTYNVGFGAYNHQFSFFMDAGELKSGTKTRGKYGTARSKAVVLTDTKG 108

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAK-----------------VFPKNTWCIFYSTERLI 99
           + +  +   AD +  QE+ + +  +K                 VF  N    F       
Sbjct: 109 VEKVMQAQQADFMLFQEIDTNSTRSKHVNQVRMVENKFHGYGHVFANNFHSAFLMWPLTD 168

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIW 158
            H    S          R       ++ YP+  +  S     +R      + + NGK++ 
Sbjct: 169 PHGSVQSGLLT----LSRYHIGSATRRQYPVTNSFISKFTDLDRCFAVTTIPVTNGKQLL 224

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
           +++          S  + Y     +   Q + L   I +   +    ++ GD+N  +   
Sbjct: 225 LIN----------SHMSAYDKGGKMRKAQMKLLNAVIERAYLASNYVIVGGDYNHALGKD 274

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           G+  +           +  P       +  +  + +   D      
Sbjct: 275 GSLSNPVDGSXXGXXSVLXPXHGRQGLHHGQGPKPRNGADRSFHRP 320


>gi|297697839|ref|XP_002826049.1| PREDICTED: deoxyribonuclease-1-like 2-like [Pongo abelii]
          Length = 101

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 7/100 (7%)

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQ 264
           +  GDFN   +Y+   D     +  ++       +       N +       D  V    
Sbjct: 2   LFLGDFNADCSYVREQDWAAIRLRSSEVFKWLIPDSADTTVGNSDCAY----DRIVACGA 57

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302
              + L  +S +   + E+    + + L  SDH P+ +  
Sbjct: 58  RLRRSLKPQSATVHDFQEEFALDQTQALAISDHFPVEVTL 97


>gi|297736947|emb|CBI26148.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/283 (9%), Positives = 71/283 (25%), Gaps = 77/283 (27%)

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLIN 100
                      + +  + ++ADI+ LQ++ +        ++ +         ++      
Sbjct: 126 WESEKEGSSRSILEVLREVNADILALQDVKAEEEKGMKPLSDLAGALGMKYVFAESWAP- 184

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWV 159
                         A+  K      ++  ++  +D       R  ++  +++    ++  
Sbjct: 185 ----------EFGNAILSKWPIKRWKAQKIIDGEDF------RNVLKATIDVPWAGEVNF 228

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR-KINYL 218
               L                 +   +Q   +         S  P ++AG  N    +  
Sbjct: 229 HCTQLDHL------------DENWRMKQTNAIIQ------SSDCPHILAGGLNSLNGSDY 270

Query: 219 GNNDDF------------------WKTIDPNDSLIRFPKEKD--------SRCNANKNLR 252
                                    + +   + +       +           N     +
Sbjct: 271 SRERWMDIIKYYEEIGKPTPKVDVMEFLKGKEYVDAKNFAGECEPVVIIAKGQNVQGTCK 330

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
               +DY +  Q++    +  S+S I              SDH
Sbjct: 331 YGTRVDYILASQDSPYKFVPRSYSVISSKGT---------SDH 364


>gi|147862842|emb|CAN82968.1| hypothetical protein VITISV_021857 [Vitis vinifera]
          Length = 1122

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 78/288 (27%), Gaps = 68/288 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++++SWN+   +++                  +++   ++   D+V LQE         
Sbjct: 2   KLKILSWNVRRANDRN--------------KRKVIKALIRSQKVDLVCLQETKIQEMSQG 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V        F             +       + V      +                   
Sbjct: 48  VIHSLGVGRFLGW-------GAVNARGAAGGVVVFWDKRVLEL----------------- 83

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              +E+ +    K      +   +  +  +++              + L        +  
Sbjct: 84  -VGLEVGISCRFKNCEDGFMWFFTGVYGPTMK-------RYREPFWEELGAIRGLWSD-- 133

Query: 203 VPFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            P+ I GDFN         R     G+   F + +D         +      +   N ++
Sbjct: 134 -PWCIGGDFNVIRFPNERSRVGRLSGSMRRFSEVLDELALRXLPLQGGPYTWSGGLNGQS 192

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +D F++ ++        S   +              SDH PI +D
Sbjct: 193 XSRLDRFLISEDWENHFSGVSQCTLPRPV----------SDHSPILLD 230


>gi|229220859|gb|ACQ45358.1| synaptojanin 1 isoform a (predicted) [Dasypus novemcinctus]
          Length = 1544

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKMTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVIAMID 867


>gi|6606293|gb|AAF19158.1|AF163667_2 CdtB [Helicobacter hepaticus]
          Length = 273

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 87/305 (28%), Gaps = 49/305 (16%)

Query: 6   VLALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           +  L+ FL+  T ++A  +  R+ +WN+   S         +           +RQ    
Sbjct: 1   MRILLCFLMSFTFALANLEDYRVSTWNLQGSSANTESKWNIS-----------VRQLITG 49

Query: 64  LDA-DIVFLQEMGSYNAVAK---------VFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            +  +I+ +QE G+  A A+           P   +     T    N            A
Sbjct: 50  DNPANILMVQEAGAIPASARRTGRMVQPGGTPVEEFTWELGTYSRPNTVYIYYAPLDVGA 109

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             V    V   +    L+  ++  +   +R A+ + +   G  ++     L S       
Sbjct: 110 RRVNLAIVSDRRADEVLVVHQNVVATEASRPAIGIRI---GNDVFFDIHALASGGGDAPA 166

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
             T      +   Q  WL               IAGDFNR            ++      
Sbjct: 167 LVTAVHDNFINMPQINWL---------------IAGDFNRDP-------ALLQSGLDTRI 204

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                    +      +      +DY V+ +++                          S
Sbjct: 205 ANHIRITAPNSATHFSSRGTNRTLDYAVVGRSSPSRSTIVLPQIAAILMAANIR-AHLSS 263

Query: 294 DHCPI 298
           DH P+
Sbjct: 264 DHSPV 268


>gi|238794448|ref|ZP_04638058.1| hypothetical protein yinte0001_6370 [Yersinia intermedia ATCC
           29909]
 gi|238726243|gb|EEQ17787.1| hypothetical protein yinte0001_6370 [Yersinia intermedia ATCC
           29909]
          Length = 253

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 92/299 (30%), Gaps = 73/299 (24%)

Query: 10  VFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           +   +P  A +     +R++ WNI                K+  +++  + +     DA 
Sbjct: 20  LGLGLPPGAPLPTSEFLRVMVWNIF---------------KQQRAEWLSVLKEFGR-DAQ 63

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ LQE  +   + +                     + ++     A+      V  L  +
Sbjct: 64  LMLLQEAQTTPELVRFA---------------TSHYQAADQVPAFALPQHPSGVMTLAAT 108

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           +P+            R +   L+ +    +G+ + V++IH  +F     + +        
Sbjct: 109 HPVYCCPLREREPLLRLSKSALITVYSIHDGRLLMVVNIHAVNFSLGVDVYSK------- 161

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
              Q + + + I   +    P ++AGDFN         +   +            +    
Sbjct: 162 ---QLEPIGEQIAMHRG---PVILAGDFNAW--SRQRVNALQRFAQTVGLAEVEFRAD-- 211

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               N++     P+D+                        D      R SDH P+ +++
Sbjct: 212 ----NRSRAFGRPLDFVFYRG---------------LTLADASVLVTRASDHNPLLVEF 251


>gi|84501455|ref|ZP_00999660.1| hypothetical protein OB2597_13858 [Oceanicola batsensis HTCC2597]
 gi|84390746|gb|EAQ03234.1| hypothetical protein OB2597_13858 [Oceanicola batsensis HTCC2597]
          Length = 297

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/300 (11%), Positives = 66/300 (22%), Gaps = 60/300 (20%)

Query: 49  RTTSDYTLLRQYAKNLDADIVFLQEMG------SYNAVAKVFPKNTWCIFYSTERLINHS 102
           + T     +      L+ADI+ L ++       +  A+    P       +      N  
Sbjct: 7   KGTPRVVKVAARIAELNADILVLGDIDYDHDGAALTALRDAIPDGAARFPHLFAERPNSG 66

Query: 103 K-------------------RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----R 139
                                         +AV  +    L   +     ++        
Sbjct: 67  IPTGLDLNGDGRAGAPGDAQGYGRFPGQGGLAVLSRWPLTLTADHSSRLWRNVPDSLLID 126

Query: 140 AGNRRAVELL----------------VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
              R                      V +    + ++  H     F    +     +   
Sbjct: 127 VQGRLGAAATGADIQRLSTVAHWEVAVHLPRGALTLMVFHAAPPVFDGPEDRNGRRNADE 186

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           LS     L            PF++ G  N   +      +  +    +  ++  P   D 
Sbjct: 187 LSFWRHRLDG--AFGPPPEPPFLVVGTANLDPHGGDGRQEVMRAFLADPRILDPPGLTDR 244

Query: 244 RCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                         +DY +                   +   + +     S H PI ID 
Sbjct: 245 PTVNWPPPGPGALRVDYLLPSSGLSV------------DAAGVLTADPEASRHHPIWIDL 292


>gi|291384332|ref|XP_002708570.1| PREDICTED: inositol polyphosphate phosphatase-like 1 [Oryctolagus
           cuniculus]
          Length = 1200

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 83/319 (26%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 370 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 427

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 428 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 483

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +   +NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 484 GAVGVSFMLNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLNAFDISLRF-- 541

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 542 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 598

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 599 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 654

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 655 IVT-----SDHSPVFGTFE 668


>gi|227832356|ref|YP_002834063.1| putative exodeoxyribonuclease [Corynebacterium aurimucosum ATCC
           700975]
 gi|227453372|gb|ACP32125.1| putative exodeoxyribonuclease [Corynebacterium aurimucosum ATCC
           700975]
          Length = 302

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 72/316 (22%), Gaps = 49/316 (15%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYN 78
                 + S N+N +             +R  ++   +  + +   AD+V +QE+  +  
Sbjct: 2   AGMSFTIASVNVNGIRA--------ACKQRNENN-PGMNAWLETTPADVVLMQEVRANPE 52

Query: 79  AVAKVFP---KNTWCIFYSTERLINHSKRDS-------------NNDIHTAIAVRKKNVR 122
              K      +  W +  +       +                  +   +   +      
Sbjct: 53  QTQKALAPALEAGWNLVQAESAAKGRAGVGILSKHALGDVSVGFGSFAESGRFIAATVEG 112

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI-------WVLDIHLKSFCFLDSLEN 175
           V   S  L        +   +            ++        +           D   N
Sbjct: 113 VRVASLYLPSGDTDSPKQDEKYLFLDEFSEVLDEMAATYPEAVIGGDWNICHRAQDLKNN 172

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
             +   S    + +   D +        P    G  N            W+         
Sbjct: 173 KANEKKSGHLPEERAFMDRVFGSFPDEQPQDKKGLGNWLGVVDYETKTAWEAAADPQWFD 232

Query: 236 RFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
              +              +           IDY    +   +   +    +    E+   
Sbjct: 233 VARRLHPEADGPYTWWTYRGQAFNNDAGWRIDYQAATKAMLERAQRTWVEKAPTVEE--- 289

Query: 287 SRGKRLSDHCPISIDY 302
               R SDH P+ ++Y
Sbjct: 290 ----RWSDHSPLLVEY 301


>gi|225432458|ref|XP_002277228.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 486

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/274 (9%), Positives = 71/274 (25%), Gaps = 77/274 (28%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNND 109
             + +  + ++ADI+ LQ++ +        ++ +         ++               
Sbjct: 213 RSILEVLREVNADILALQDVKAEEEKGMKPLSDLAGALGMKYVFAESWAP---------- 262

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFC 168
                A+  K      ++  ++  +D       R  ++  +++    ++      L    
Sbjct: 263 -EFGNAILSKWPIKRWKAQKIIDGEDF------RNVLKATIDVPWAGEVNFHCTQLDHL- 314

Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR-KINYLGNNDDF--- 224
                        +   +Q   +         S  P ++AG  N    +           
Sbjct: 315 -----------DENWRMKQTNAIIQ------SSDCPHILAGGLNSLNGSDYSRERWMDII 357

Query: 225 ---------------WKTIDPNDSLIRFPKEKD--------SRCNANKNLRNKIPIDYFV 261
                           + +   + +       +           N     +    +DY +
Sbjct: 358 KYYEEIGKPTPKVDVMEFLKGKEYVDAKNFAGECEPVVIIAKGQNVQGTCKYGTRVDYIL 417

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             Q++    +  S+S I              SDH
Sbjct: 418 ASQDSPYKFVPRSYSVISSKGT---------SDH 442


>gi|114108003|gb|AAI22960.1| LOC779554 protein [Xenopus (Silurana) tropicalis]
          Length = 786

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/330 (13%), Positives = 83/330 (25%), Gaps = 62/330 (18%)

Query: 20  VAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
             +  R  +++WN+        ++       R              +D  ++ LQE+ S 
Sbjct: 198 AGKDFRIYVITWNVGCAVPPSDLTSLLCLNARDDK-----------IDMFVIGLQEVNSM 246

Query: 77  -YNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRV--LQQSYPLLG 132
               +      + W   +       ++    S       + V  K   +  L+       
Sbjct: 247 INKRLKDALFSDQWSEVFMDVLSPFSYVLVSSVRMQGCLLLVFSKYFHLPFLRDIQTDCT 306

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                   GN+  V + + + G  +  L+ HL +             S      Q Q  +
Sbjct: 307 RTGLGGYWGNKGGVSIRLSLFGHMVCFLNCHLPAHMENTDQRVDNFESI----LQLQQFQ 362

Query: 193 DWITQKKESLVPFVIAGDFN--------------------------RKINYLGNNDDFWK 226
             +             GD N                           ++N     +    
Sbjct: 363 GPLANGVLDHDLVFWFGDLNFRIEDLDLHFVKSAIQGNKLALLWEKDQLNMAKIFEPVLN 422

Query: 227 TIDPNDSLIRFPKEKDSRCNAN---KNLRNKIPIDYFV------MDQNAYKFLIQESFSE 277
                        + D   N        R     D  +      + Q+  K L   S   
Sbjct: 423 GFMEGSLTFPPTYKFDVGTNTYDTSSKKRKPAWTDRILWKMKCPITQSPAKQLGTISTRS 482

Query: 278 ILYNEDDIKSRGKRL----SDHCPISIDYD 303
              +   + S G  +    SDH P+S  + 
Sbjct: 483 KELSV-TLLSYGSHMQYTESDHKPVSAIFS 511


>gi|260820545|ref|XP_002605595.1| hypothetical protein BRAFLDRAFT_94294 [Branchiostoma floridae]
 gi|229290929|gb|EEN61605.1| hypothetical protein BRAFLDRAFT_94294 [Branchiostoma floridae]
          Length = 278

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 71/255 (27%), Gaps = 31/255 (12%)

Query: 3   RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            K  LA     V   +     +++ ++N+ T          K S          + +   
Sbjct: 1   MKCGLAFFALGVLALSGACSALKIGAFNVQTFGRT------KMSKPDVVEILLQIAE--- 51

Query: 63  NLDADIVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
               DI+ +QE+    + A+     +           +++     S      A   R   
Sbjct: 52  --RYDILLIQEIRDSTFTAIYSFLDQLNARRGNDYSMVLSDRLGRSTYMEQYAFLWRNDR 109

Query: 121 VRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
             VL   Y     +D F+R     R      V  +   I +  +   +    + L   Y 
Sbjct: 110 DLVLAGDYHYEDPEDIFAREPYIVRFMSGNTVTDDFVLIPMHAVPSDAVAENNELFTVYQ 169

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
              S    Q                  +I GD N   +Y+G +D     I  ++      
Sbjct: 170 DVVSRWGVQ----------------NVIIMGDLNADCSYVGASDWSSIRIWTDNRFEWLI 213

Query: 239 KEKDSRCNANKNLRN 253
             +      + +   
Sbjct: 214 GNEADTTVKSTHCAY 228


>gi|307182606|gb|EFN69777.1| Synaptojanin-1 [Camponotus floridanus]
          Length = 1158

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/326 (10%), Positives = 73/326 (22%), Gaps = 52/326 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK----NLDADI------VFLQE 73
           V + ++N+N       V     S+     + +           N D D+      +  +E
Sbjct: 532 VSVGTYNVNGGKHFRSVVYKDVSLADWLFNGSRKSSLVSLEQDNTDNDVPVDIFAIGFEE 591

Query: 74  MGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVRVLQ 125
           +   NA   +         W          +             +     +R  +   L+
Sbjct: 592 IVDLNASNIMAASSDNAKAWADELQKVLSKDTEYVLVTYQQLVGVCLYLFIRPVHAPYLR 651

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                          GN+ A  +   +       +  H  +     +  N      +   
Sbjct: 652 DVAVDCVKTGLGGATGNKGAAAIRCVLYSTSFCFVCAHFAAGQSQVNERNADYAEITRK- 710

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTID 229
                +   + +   +       GDFN +++   +                 D      +
Sbjct: 711 -----IAFPMGRTLNTHDYVFWCGDFNYRVDMDKDEMREMIKRGELDQILQYDQLRVQQE 765

Query: 230 PNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQESFSE 277
             +    F +   +     K                    D  +  +      I      
Sbjct: 766 QGNVFKNFLEGPINFDPTYKYDLFSEDYDTSEKCRQPAWTDRVLWKRRKQVPDIDSPTDW 825

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303
                        + SDH P+    D
Sbjct: 826 NPGKLVYYGRAELKQSDHRPVIATID 851


>gi|311270181|ref|XP_003132802.1| PREDICTED: synaptojanin-1-like, partial [Sus scrofa]
          Length = 1530

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 93/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 486 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 545

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 546 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 605

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 606 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 659

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 660 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 719

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 720 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 779

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                        S     +    +   G+   + SDH P+    D
Sbjct: 780 EDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 825


>gi|296215581|ref|XP_002754191.1| PREDICTED: protein angel homolog 1 [Callithrix jacchus]
          Length = 663

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 14/207 (6%)

Query: 23  KVRLVSWNINTLSEQEGVS----LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  L+S+NI      +  S         +      +  L Q  ++ D DI+ LQE+   +
Sbjct: 237 QFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDH 296

Query: 79  AVAKVFPKNTWCIFYSTER----LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              ++ P      F    +                    +               L    
Sbjct: 297 YWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDN 356

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                       E L +++   + V + H+        ++            +   L D 
Sbjct: 357 VGLVLLLQPLVPEGLGQVSVAPLCVANTHILYNPRRGDVKLAQMAILLAEVDKVARLSD- 415

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN 221
                 S  P V+ GD N   +    N
Sbjct: 416 -----GSHCPIVLCGDLNSVPDSPLYN 437


>gi|32266946|ref|NP_860978.1| cytolethal distending toxin CdtB [Helicobacter hepaticus ATCC
           51449]
 gi|32262998|gb|AAP78044.1| cytolethal distending toxin CdtB [Helicobacter hepaticus ATCC
           51449]
          Length = 273

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 87/305 (28%), Gaps = 49/305 (16%)

Query: 6   VLALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           +  L+ FL+  T ++A  +  R+ +WN+   S         +           +RQ    
Sbjct: 1   MRILLCFLMSFTFALANLEDYRVSTWNLQGSSANTESKWNIS-----------VRQLITG 49

Query: 64  LDA-DIVFLQEMGSYNAVAK---------VFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
            +  +I+ +QE G+  A A+           P   +     T    N            A
Sbjct: 50  DNPANILMVQEAGAIPASARRTGRMVQPGGTPVEEFTWELGTYSRPNTVYIYYAPLDVGA 109

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             V    V   +    L+  ++  +   +R A+ + +   G  ++     L S       
Sbjct: 110 RRVNLAIVSDRRADEVLVVHQNVVATEASRPAIGIRI---GNDVFFNIHALASGGGDAPA 166

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
             T      +   Q  WL               IAGDFNR            ++      
Sbjct: 167 LVTAVHDNFINMPQINWL---------------IAGDFNRDP-------ALLQSGLDTRI 204

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                    +      +      +DY V+ +++                          S
Sbjct: 205 ANHIRITAPNSATHFSSRGTNRTLDYAVVGRSSPSRSTIVLPQIAAILMAANIR-AHLSS 263

Query: 294 DHCPI 298
           DH P+
Sbjct: 264 DHSPV 268


>gi|77361734|ref|YP_341309.1| hypothetical protein PSHAa2830 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876645|emb|CAI87867.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 284

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 80/279 (28%), Gaps = 69/279 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           RL+SWNI           +K   +    D T L     N  ADIV LQE      +  + 
Sbjct: 69  RLLSWNI-----------YKAQNQGLYKDLTHL-----NESADIVLLQEAIVDTRLTSLK 112

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
           P   +            S    + ++ + +    +    +  ++ +       S      
Sbjct: 113 PFWRF------------SPGYKSGNVQSGVMTLSRWPATVHCTF-IHKEPWLRSPKATNI 159

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
               +   N +++  +++H  +F F                  AQ L+  I   ++   P
Sbjct: 160 VEYAM--ANQQRLLSVNLHGINFTFGTKAY-------------AQQLQASIKIMQQHKGP 204

Query: 205 FVIAGDFNRKIN-YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
            + AGD N   +      +D    +   +++    K   +           + +D     
Sbjct: 205 ILFAGDLNAWSDARQKLVNDALTKLGLKEAIYVDDKRTKA---------FGLALDQVWAR 255

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                               D        SDH PI    
Sbjct: 256 G---------------VVISDTLVSEYNSSDHNPILATL 279


>gi|271964849|ref|YP_003339045.1| hypothetical protein Sros_3363 [Streptosporangium roseum DSM 43021]
 gi|270508024|gb|ACZ86302.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 321

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 73/290 (25%), Gaps = 62/290 (21%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            V   A+  + +R+V  N++  +     +                       DADI+   
Sbjct: 82  FVRTAATGPRDLRVVHQNVSYANGDLAATARALRA----------------TDADILVAV 125

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+     +       T    ++ E    +  R   N     +AV  +         P+ G
Sbjct: 126 EVSDDPVLE----NGTMDPVFAREIGPGYPYRFPGNP---GVAVWSRYPF-DGLPRPVPG 177

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              S            ++     ++ +  +HL SF            +      +   L 
Sbjct: 178 VPRSQQ---------AVIRTPQGEVSLYAVHLASFRPAQPSVIANRNA------EVGALA 222

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             +   ++     ++ GD N                          K           + 
Sbjct: 223 RAVR--EDPSPRIIVVGDLNTATTDRELGRLT------ALLSPVSEKAGTGLQFTWPAVL 274

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             + +D+ +                  +   D +     +SDH  I  D 
Sbjct: 275 PAVRLDHVLTRG---------------FTTLDSRVLPMSISDHRAILADL 309


>gi|239933168|ref|ZP_04690121.1| hypothetical protein SghaA1_33403 [Streptomyces ghanaensis ATCC
           14672]
          Length = 276

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/291 (9%), Positives = 68/291 (23%), Gaps = 66/291 (22%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L+P +   A+ + +V  N++  +     +    +  R                 D++ L
Sbjct: 49  LLLPGSGPGARDLVVVQHNVSDENPDPAGTARALAAAR----------------PDLIAL 92

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+                           +     + +   + +  +      +   + 
Sbjct: 93  QELVPRAL---------------PVYERTLAAHYPYHAVRGTVGLWSRYPLADARPLNIR 137

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
               +         +  +V      +     HL S         +     S     A  L
Sbjct: 138 PRGITGFWER---GLRTVVRTPHGDVAAYVAHLPSVRVGAGGLASSRRDES-----AGLL 189

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + +    E L   ++ GD N  ++  G      +                    +    
Sbjct: 190 GEALA--AEDLETVILLGDLNGTVDDRGLAPVTSRMNVAERGF----------AFSFPAA 237

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                ID  +        +     +                SDH P++   
Sbjct: 238 FPLARIDQVMARSATVGRIRALPAT---------------GSDHLPVTARI 273


>gi|126640501|ref|YP_001083485.1| hypothetical protein A1S_0428 [Acinetobacter baumannii ATCC 17978]
          Length = 326

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/251 (10%), Positives = 63/251 (25%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL ++ + L  D++   E  +            W             +     D  
Sbjct: 67  DKYHLLLEHVRTLKPDLLLTLESDTT-----------WENALKEIEKDYPYRVPVPLDNL 115

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   +L  +              ++  +G  + +  +H K     +
Sbjct: 116 YGMHLYSRLPLKNTEVKFILSNEIPSIHT-------TVILRSGMPVQLYCLHPKPPSPTE 168

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++T   +          L     Q K+     ++ GD N            ++ I   
Sbjct: 169 AKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS-- 215

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +    ++     
Sbjct: 216 GLLDPRVGRHFINTFHADYPLLRWSLDHIFHS--------------TDFGLVKMQRLSHI 261

Query: 292 LSDHCPISIDY 302
            SDH P+ +  
Sbjct: 262 GSDHFPVYVVL 272


>gi|328853157|gb|EGG02298.1| hypothetical protein MELLADRAFT_38694 [Melampsora larici-populina
           98AG31]
          Length = 366

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 87/318 (27%), Gaps = 55/318 (17%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEM 74
           S A  + +   ++N+N           +     T+ D         + + DI  +  QE+
Sbjct: 20  SSALPITIWAGTYNLNG----------RIPSALTSEDLMKWLWPVGSNEPDIMVIAFQEI 69

Query: 75  GSYNAVAKVFPKNTWCIFYST--------ERLINHSKRDSNNDIHTA----IAVRKKNVR 122
              +    +         +                S     +D        I V+   V 
Sbjct: 70  VKLSPQQIMITDPEKKRRWEQTIMTSLERRPDKKSSYVILRSDQLVGTALIILVKSDMVN 129

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
            ++              AGN+ AV + ++ +      +  H  +     +     +    
Sbjct: 130 EVRSVEATTKKTGLKGMAGNKGAVSIRLQYHDSSFCFVTAHFAAGY---NNVEERNHDYL 186

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP---- 238
            +  + ++LK    +   S    + AGDFN +I    +N+   + +   D          
Sbjct: 187 TIYNELEFLKG---KTISSHENVIWAGDFNYRIGGGLSNEFVRQAVVEKDLTTLLAADQL 243

Query: 239 --------------KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED- 283
                         +   +     K        D     +        +    +  + D 
Sbjct: 244 LANMSTQAVFPKYLEGPITFPPTYKYDIGTDRYD---TSEKLRIPAWTDRILYLGDDLDL 300

Query: 284 -DIKSRGKRLSDHCPISI 300
            +      ++SDH P+  
Sbjct: 301 TNYSRAELKVSDHRPVYA 318


>gi|196011427|ref|XP_002115577.1| hypothetical protein TRIADDRAFT_29738 [Trichoplax adhaerens]
 gi|190581865|gb|EDV21940.1| hypothetical protein TRIADDRAFT_29738 [Trichoplax adhaerens]
          Length = 905

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/349 (12%), Positives = 91/349 (26%), Gaps = 74/349 (21%)

Query: 23  KVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR------QYAKNLDADI--VFLQ 72
            +R+   +WN+N       ++    S+         +         +     DI  +  +
Sbjct: 496 PLRVFIGTWNVNGGKHFRSIAFRHQSMADWLVHAQDIAAQRSNRDLSNQTKPDIYAIGFE 555

Query: 73  EMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVRVL 124
           E+   +A   +      KN W            S      +    +     V+   +  +
Sbjct: 556 ELVDLSASNILGASHTNKNEWLNELQRILNQESSYALVAVEQLVGVCLYIFVKVSLLPHI 615

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +             +AGN+  + +  ++       +  HL +        N+        
Sbjct: 616 KDVAVDTVKTGLKGKAGNKGGIGIRFQLFSTTFCFICSHLAAGQNHVDDRNSDYKDIR-- 673

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTI 228
               + L   +    +S       GD N +I+                     D   K+ 
Sbjct: 674 ----EGLTFPMAYLVDSHDYVFWCGDLNYRIDLPRDEVLKMIENNSWLTMQEEDQLIKSR 729

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPID-----------------YF----------- 260
           +   S I F + K       K        D                 +            
Sbjct: 730 ESGLSFIGFKEGKPDFAPTYKYDLFSDDYDTSEKQRTPAWTDRVMWKHIKNSKTYRKFSR 789

Query: 261 ---VMDQNAYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
              +M+ N  + +     +E    E  +    +   + SDH P++   D
Sbjct: 790 KLDLMNINHLEEITTSHVTESQRKEGHLVYYDRTELKTSDHRPVAAIID 838


>gi|167627082|ref|YP_001677582.1| hypothetical protein Fphi_0858 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667644|ref|ZP_04755222.1| hypothetical protein FphipA2_02660 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876189|ref|ZP_05248899.1| endonuclease/exonuclease/phosphatase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|167597083|gb|ABZ87081.1| endonuclease/exonuclease/phosphatase family [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|254842210|gb|EET20624.1| endonuclease/exonuclease/phosphatase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 239

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 100/283 (35%), Gaps = 56/283 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            + K  L+SWN            +K   K T +    +R    N + DI  LQE    + 
Sbjct: 10  QSTKFCLMSWN-----------SYKIDYKDTETFKAYIRHTYFNHNIDIFCLQEAVHQHD 58

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
               FP + + I +++               +  +A       +  ++  +L        
Sbjct: 59  TK--FPIDKFDINFASN--------IVLRSHNYGVATVSHFPVI--KNVKILTTHRESVI 106

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             ++ ++   + I+G K+ V++IH  +F            S  +   + + +K++I+  +
Sbjct: 107 NTHKASLITHLNIDGTKVVVVNIHAINF-----------KSNKVYEYEFEKIKEYIS-PE 154

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +   P +IAGDFN    +        K      S      ++     + ++      +D+
Sbjct: 155 KYKHPIIIAGDFN---TWNRRRVKLIKDFCREFSFKVAFIDEPQLVKSFQS----NHLDF 207

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +                +   +  +    K++SDH PI  ++
Sbjct: 208 VLYRG-------------LNLEKASVLDC-KKISDHNPIIAEF 236


>gi|225448081|ref|XP_002273589.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1715

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 69/276 (25%), Gaps = 51/276 (18%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
           + + G           +S   +++   ++   D+  LQE         V        F  
Sbjct: 761 NYEGGKRQVGGRQANDSSKRKVIKALIRSQRVDVFCLQETKIQAMSEGVVRSLGTGRFLG 820

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
              L               I V                          R    L VE+  
Sbjct: 821 WGALEASGSAG-------GILVCWDR----------------------RMMDVLDVEVGQ 851

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
             I     +++              S        + L           VP+ + GDFN  
Sbjct: 852 FSISCRVRNVEDGFCWMFTGVYGPFSRDERECLWEELGAIRGLW---DVPWCLGGDFNIT 908

Query: 215 INYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265
           +     +           F + +D  +      +      N  +  ++   +D F++ QN
Sbjct: 909 LLQGERSRQGRITRAMRRFAQMVDELELTDLPLQGGRCTWNGGRGSQSWARLDRFLVTQN 968

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                         ++        +  SDH PI ++
Sbjct: 969 ----------WLDHFSGVVQSRLPRPTSDHFPILLE 994


>gi|147823103|emb|CAN66330.1| hypothetical protein VITISV_000598 [Vitis vinifera]
          Length = 2691

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 74/278 (26%), Gaps = 71/278 (25%)

Query: 24   VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            ++++SWNI  L               + +   +++ + +  + D+V  QE        + 
Sbjct: 1545 MKIISWNIRGLG--------------SRTKRRVVKDFLRLQNPDVVMFQETK-REVCDRR 1589

Query: 84   FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            F  + W +      ++        +  +  +   ++            G     +    R
Sbjct: 1590 FVGSVWSVRNKEWAILPACGAFRRDFDYLGLKKNER-----------XGGVYGPNNPSIR 1638

Query: 144  RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            +     +        +  +   S+C           S  L                    
Sbjct: 1639 KEFWXELS------DLFGLTYPSWCVGGDFNVIRRRSEKL----------------GGSR 1676

Query: 204  PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
                  DF+  I     +D   +    N S      ++   C           +D F+  
Sbjct: 1677 VTSSMRDFDGFIRESELHDSPLR----NASFTWSNMQESPVCK---------RLDRFLYS 1723

Query: 264  QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                          + + +   +   +  SDH PI +D
Sbjct: 1724 NE----------WXLSFPQSLQEVLPRWTSDHWPIVLD 1751


>gi|222136583|ref|NP_001558.3| phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2 [Homo
           sapiens]
 gi|269849650|sp|O15357|SHIP2_HUMAN RecName: Full=Phosphatidylinositol-3,4,5-trisphosphate
           5-phosphatase 2; AltName: Full=Inositol polyphosphate
           phosphatase-like protein 1; Short=INPPL-1; AltName:
           Full=Protein 51C; AltName: Full=SH2 domain-containing
           inositol-5'-phosphatase 2; Short=SH2 domain-containing
           inositol phosphatase 2; Short=SHIP-2
 gi|119595261|gb|EAW74855.1| inositol polyphosphate phosphatase-like 1, isoform CRA_b [Homo
           sapiens]
 gi|187954553|gb|AAI40854.1| Inositol polyphosphate phosphatase-like 1 [Homo sapiens]
          Length = 1258

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 428 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 485

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 486 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 541

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 542 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLNAFDISLRF-- 599

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 600 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 656

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 657 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 712

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 713 IVT-----SDHSPVFGTFE 726


>gi|119595260|gb|EAW74854.1| inositol polyphosphate phosphatase-like 1, isoform CRA_a [Homo
           sapiens]
          Length = 1267

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 428 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 485

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 486 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 541

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 542 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLNAFDISLRF-- 599

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 600 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 656

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 657 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 712

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 713 IVT-----SDHSPVFGTFE 726


>gi|114639230|ref|XP_508622.2| PREDICTED: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2
           isoform 2 [Pan troglodytes]
          Length = 1258

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 428 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 485

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 486 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 541

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 542 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLNAFDISLRF-- 599

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 600 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 656

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 657 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 712

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 713 IVT-----SDHSPVFGTFE 726


>gi|114639232|ref|XP_001174654.1| PREDICTED: inositol polyphosphate phosphatase-like 1 isoform 1 [Pan
           troglodytes]
          Length = 1016

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 186 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 243

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 244 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 299

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 300 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLNAFDISLRF-- 357

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 358 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 414

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 415 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 470

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 471 IVT-----SDHSPVFGTFE 484


>gi|2653424|emb|CAA74743.1| inositol polyphosphate 5-phosphatase [Homo sapiens]
          Length = 1258

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 428 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 485

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 486 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 541

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 542 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLNAFDISLRF-- 599

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 600 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 656

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 657 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 712

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 713 IVT-----SDHSPVFGTFE 726


>gi|556192|gb|AAA96658.1| 51C protein [Homo sapiens]
          Length = 1149

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 364 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 421

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 422 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 477

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 478 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLNAFDISLRF-- 535

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 536 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 592

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 593 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 648

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 649 IVT-----SDHSPVFGTFE 662


>gi|16554263|dbj|BAB71707.1| unnamed protein product [Homo sapiens]
          Length = 475

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/232 (9%), Positives = 66/232 (28%), Gaps = 35/232 (15%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 159 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 218

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 219 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 278

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 279 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 338

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY 217
              +       +   + + + +  + +        + +P V+  D N   + 
Sbjct: 339 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDS 390


>gi|327289940|ref|XP_003229682.1| PREDICTED: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase
           2-like [Anolis carolinensis]
          Length = 1210

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 90/305 (29%), Gaps = 33/305 (10%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+ ++   +G+S W  S     +   +        D  +   QE  +     +   
Sbjct: 432 IGTWNMGSVPPPKGISSWLASKGLGKTLDEMTVSI--PHDIYVFGTQE--NSMGDKEWVD 487

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                +   T+         S  +I  A+ V+ ++   +             +  GN+ A
Sbjct: 488 AMRSVLKEFTDLDYRPIAMQSLWNIKIAVLVKPEHENRISHVSTSSVKTGIANTLGNKGA 547

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENT-YSPSCSLLSQQAQWLKDWITQKKESLVP 204
           V +    NG     ++ HL S     +  N  Y     LLS   + L  +          
Sbjct: 548 VGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDKQLSSF--DISLRFTH 605

Query: 205 FVIAGDFNRKINYL----------GNNDDFWKT----IDPNDSLIRFPKEKDSRCNANKN 250
               GD N +++               +   K     ++     I     ++        
Sbjct: 606 LFWFGDLNYRLDMDIQEILNYINRKEFEPLLKVDQLNLEKEKHKIFLRFNEEEITFPPTY 665

Query: 251 LRNKIPID-YFVMD----------QNAYKFLIQESFSEILYNEDDIK-SRGKRLSDHCPI 298
              +   D Y               +    ++ +S+ E   N +    +     SDH P+
Sbjct: 666 RYERGSRDTYVWHKQKPTGVRTNVPSWCDRILWKSYPETHINSNSYGCTDDIVSSDHSPV 725

Query: 299 SIDYD 303
              ++
Sbjct: 726 FAAFE 730


>gi|284005116|ref|NP_001164888.1| synaptojanin-1 [Oryctolagus cuniculus]
 gi|218456201|gb|ACK77493.1| synaptojanin 1 isoform a (predicted) [Oryctolagus cuniculus]
          Length = 1555

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|159036780|ref|YP_001536033.1| endonuclease/exonuclease/phosphatase [Salinispora arenicola
           CNS-205]
 gi|157915615|gb|ABV97042.1| Endonuclease/exonuclease/phosphatase [Salinispora arenicola
           CNS-205]
          Length = 328

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/289 (9%), Positives = 66/289 (22%), Gaps = 60/289 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
               +    VRL++ N+                   ++D   L    +    D++ +QE 
Sbjct: 93  TPPPADGPAVRLLTANL----------------LAGSADARALVDLVRRHSVDVLTVQEF 136

Query: 75  GSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               A        +    +     +                          +      G 
Sbjct: 137 TPAVAAELDQAGLDQLLPYRELHPVEGTPGSGLY----------------ARHPISAGGV 180

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           + +    G  +A   ++      + V  +H  +   +D + +      +           
Sbjct: 181 RHNSGGWGFLQAYGTILVPGAPPVRVESVHPAAPYAIDQIGHWRRDLAAQ---------- 230

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
                       ++AGDFN  +++                                +   
Sbjct: 231 --PSATPDGQLRILAGDFNATLDHAPLRALLDTGYVDAADAAGTGLIGTWGPYDG-DPIP 287

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + ID+ ++D+                            SDH  +  D 
Sbjct: 288 PVAIDHVLVDRRVAVRATAV--------------YAIPGSDHRAVFTDL 322


>gi|74001109|ref|XP_856447.1| PREDICTED: similar to synaptojanin 1 isoform a isoform 3 [Canis
           familiaris]
          Length = 1310

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 93/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                        S     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|74001111|ref|XP_535580.2| PREDICTED: similar to Synaptojanin-1 (Synaptic
           inositol-1,4,5-trisphosphate 5-phosphatase 1) isoform 1
           [Canis familiaris]
          Length = 1571

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 93/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                        S     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|295672866|ref|XP_002796979.1| SacI domain and endonuclease/exonuclease/phosphatase family protein
           [Paracoccidioides brasiliensis Pb01]
 gi|226282351|gb|EEH37917.1| SacI domain and endonuclease/exonuclease/phosphatase family protein
           [Paracoccidioides brasiliensis Pb01]
          Length = 1237

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 85/322 (26%), Gaps = 55/322 (17%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEM 74
           S ++++R  + ++N+N    +   +   +           L     + D  I  V  QE+
Sbjct: 606 SSSKRIRIWVGTFNVNG---RSDGAKVTDLSPWLLPHLDRL-----HEDPAIFAVGFQEI 657

Query: 75  GSYNAVAKVFPKNTWCIFY----------STERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
              +    +       I +             R          +      A+       L
Sbjct: 658 VELSPQQIMSTDPGNRIIWENAVKNTLNDYANRKGVSEYVLLRSGQLVGTALLIFVKSEL 717

Query: 125 QQSYPLLGA----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSP 179
                 +            AGN+    + ++ +  +I  +  HL +     D     Y  
Sbjct: 718 LTDIKAVEGSVKKTGMSGIAGNKGGCAIRLQCSNTRICFVTAHLAAGFSNYDERNRDYQT 777

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----------------GNNDD 223
               L  Q         +  E     +  GDFN +I                     ND 
Sbjct: 778 ISQGLRFQR-------NRSIEDHDAIIWLGDFNYRIGLPNDRVRGLIKDGDLETLYENDQ 830

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYN 281
               +    +   + + + +     K        D     +      +  +  +      
Sbjct: 831 LNLQMVAGLTFPFYSEARITFPPTYKYDNGTDLYD---TSEKARIPAWCDRVLWKGGNLR 887

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
           + +  +   + SDH P+   +D
Sbjct: 888 QLEYNAASLKFSDHRPVYATFD 909


>gi|169601596|ref|XP_001794220.1| hypothetical protein SNOG_03666 [Phaeosphaeria nodorum SN15]
 gi|111067751|gb|EAT88871.1| hypothetical protein SNOG_03666 [Phaeosphaeria nodorum SN15]
          Length = 1207

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 79/305 (25%), Gaps = 40/305 (13%)

Query: 26  LVSWNINT------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           + ++N+N             +    +  ++      +  Q    L    +   +      
Sbjct: 618 VGTFNLNGKTNGITADLSPWLCPDVDPSQQCPEIVAVGFQEIVELSPQQIMATDPDRREL 677

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKD 135
             +           + E+                    + VR   ++ ++     L    
Sbjct: 678 WERAVKNTLNR---NAEKHGREEYVLLRGGQLVGASLSVFVRGDCLKHIKNVEGSLKKTG 734

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
               AGN+ AV + +E     I ++  HL +        N    + S   +  +      
Sbjct: 735 MSGMAGNKGAVAIRIEYGNTSICLVTAHLAAGFSNYEERNRDYKTISHGLKFQR------ 788

Query: 196 TQKKESLVPFVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPK 239
            +  E     +  GDFN +I                     ND     +    +   + +
Sbjct: 789 NRSIEDHDTVIWFGDFNYRIGLSNEKVQKLCHVGDLETLYENDQLNLQMVAGLTFPYYSE 848

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            + +     K   N    D     +      +  +         +    +   R SDH P
Sbjct: 849 ARITFPPTYKYDLNSDTYD---TSEKARIPAWCDRVLRKGDNIRQIHYDAAPLRFSDHRP 905

Query: 298 ISIDY 302
           +   +
Sbjct: 906 VYATF 910


>gi|326933009|ref|XP_003212602.1| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase-like
           [Meleagris gallopavo]
          Length = 1100

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 80/316 (25%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W                       D+  V  QE+         
Sbjct: 453 VGTYNVNGQSPKESLQPWLRCDSAP---------------PDVYCVGFQELDLSKEAFFF 497

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    +     +             I     V+      + +          
Sbjct: 498 NDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKADLALNISEVEIETVGTGI 557

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  + +   + V++ HL +        N          Q  Q   +   
Sbjct: 558 MGRMGNKGGVAIRFKFHNTSVCVVNSHLAAHTEEYERRNQDFKDICSRMQFCQSNPNLPP 617

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N ++  L                    D   + ++       F +
Sbjct: 618 LTISKHDVILWLGDLNYRLEELDVTKVKQLVDEKAFSELCQYDQLKRQMNAKAVFEGFTE 677

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + S     K              R     D  +           ++ +++ Y       
Sbjct: 678 GEISFQPTYKYDAGCDEWDTSEKCRVPAWCDRILW--------KGQNVAQLSYRSH---- 725

Query: 288 RGKRLSDHCPISIDYD 303
              ++SDH P+S  +D
Sbjct: 726 MALKISDHKPVSSVFD 741


>gi|254993774|ref|ZP_05275964.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J2-064]
          Length = 150

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 59/192 (30%), Gaps = 43/192 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N L                        +Y + +DADI  LQE          
Sbjct: 1   MKLISWNVNGLRAAVKKGF---------------LEYFEEVDADIFCLQETKLQEG-QIE 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +  +++           +    ++  A+  K   +  Q    +   D+  R    
Sbjct: 45  LDLPAYKDYWN----------YAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +  ++ +++ ++  +                        + +++    +   
Sbjct: 91  -----VITLEFEEFFMVTVYTPN-------SQAELKRLDYRMTFEDAILEYVK-NLDKTK 137

Query: 204 PFVIAGDFNRKI 215
           P V+ GD N   
Sbjct: 138 PVVLCGDLNVAH 149


>gi|240047285|ref|YP_002960673.1| Membrane nuclease, lipoprotein [Mycoplasma conjunctivae HRC/581]
 gi|239984857|emb|CAT04847.1| Membrane nuclease, lipoprotein [Mycoplasma conjunctivae]
          Length = 391

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 83/322 (25%), Gaps = 57/322 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAVA 81
           RL  WN+     ++  +                 Q     + D++ L E+    + N  +
Sbjct: 81  RLGFWNVLNYDNKDEKARNY-----------AFSQIIATSNIDLIALAEIKENPNANGTS 129

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY------PLLGAKD 135
            +   N        + L        N         +     ++           L+    
Sbjct: 130 IIEELNKLQQDAKWKELTTEVVGKKNQQERYTWLYKSSIFDLITPKNSKANNPYLISEYK 189

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ----AQWL 191
           +   A    A     + +GK I +   H  S     + +   +        Q    A+ L
Sbjct: 190 TIKYARPVAAAFFKHKTSGKTISLATGHFDSPGASKTRKEKQNREFKSQGDQEINEAKHL 249

Query: 192 KDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            + + +          +   D N + N       F  T +     +    EK S   +  
Sbjct: 250 ANVLKELNADTPTDAQIFMADTNIRENATNY--AFKSTFEAGYKSLLETNEKTSL--SQT 305

Query: 250 NLRNKIPIDYFVMDQNA--------------------------YKFLIQESFSEILYNED 283
                   D      N                                ++    + Y  +
Sbjct: 306 FGGYASAYDKIFFKGNLPTLNANKFDLWTVFDTNIVDLKTYQELARKDRKKVGSVSYKNN 365

Query: 284 DIKSRGKR-LSDHCPISIDYDF 304
           + KS+  R +SDH  +  D DF
Sbjct: 366 EGKSKWVRSISDHTAVYFDIDF 387


>gi|196230175|ref|ZP_03129038.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus
           Ellin428]
 gi|196225772|gb|EDY20279.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus
           Ellin428]
          Length = 379

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 65/263 (24%), Gaps = 27/263 (10%)

Query: 5   YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
             + + F      +    ++R V++N                     S+      +   +
Sbjct: 113 IFVYMTFRWSSVPSPNGSELRAVTFN------------------FGESNRPQFMSFLDAV 154

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
             DI+ +Q+     A   +  K     F   ++    SK           A         
Sbjct: 155 KPDIILIQDAKGRGA--DLGRKIPGMYFSDLDQFAFLSKFPIQKAELVGGAKIHGEPVAA 212

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +      G   +          + L    G     +   L      ++    +       
Sbjct: 213 RYEIQYQGRTIAIYSVHLPTPRQQLSRFLGG--RHILGDLAGHGHREAGYGDFRDWVRER 270

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
              A  L   + +      P ++ GDFN   +    +    +  D    + R        
Sbjct: 271 MSLAGALAKVLAE---EKEPMIVGGDFNTPDHGYIYHIFAGEMTDCFARVGRGWGLTFPG 327

Query: 245 C--NANKNLRNKIPIDYFVMDQN 265
              N        + IDYF   + 
Sbjct: 328 YTHNPISFFGPWLRIDYFFTGKG 350


>gi|226326256|ref|ZP_03801774.1| hypothetical protein PROPEN_00098 [Proteus penneri ATCC 35198]
 gi|225205334|gb|EEG87688.1| hypothetical protein PROPEN_00098 [Proteus penneri ATCC 35198]
          Length = 130

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 45/150 (30%), Gaps = 31/150 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ VS+NIN L                 +    L    +    D++ LQE         +
Sbjct: 1   MKFVSFNINGL----------------RARPHQLEAIIEKHQPDVIGLQE---TKVHDDM 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           FP +       T   + +         H  +A+  K   V  +        D+      R
Sbjct: 42  FPLD-------TVGALGYHVFYHGQKGHYGVALLTKEKPVAVRKGFPSDDDDA-----QR 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           R +   +E     + V++ +       D  
Sbjct: 90  RMIMADIETPAGLLTVMNGYFPQGESRDHE 119


>gi|149378372|ref|ZP_01896074.1| Exonuclease III [Marinobacter algicola DG893]
 gi|149357337|gb|EDM45857.1| Exonuclease III [Marinobacter algicola DG893]
          Length = 268

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/269 (9%), Positives = 66/269 (24%), Gaps = 50/269 (18%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
           ++    DAD+V +Q         ++   N     Y    +      D    I+T      
Sbjct: 21  EWLARQDADVVCVQ--DHRMRAYEIEDFNLIPEGYEAYFIDGERNEDGGVGIYT------ 72

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                  + +P        +   +R    +  + +   +  +          + +     
Sbjct: 73  -------RHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLSPSALGREEELIGEDDL 125

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---------------GNNDD 223
                     +     + +       F+   +     +                  +   
Sbjct: 126 TVLDHKDDFMEAFGLHMQKTLRKRRQFIFCANLQTAHHVTDASPLYHKLDFSGFLPHERA 185

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQES 274
           +   +      +   ++ + + N       +           +DY ++     K +    
Sbjct: 186 WLDRLFDEMGCVDAFRDINKQSNQYTWWPEQAEGSRKNAGIRVDYQLLTPGIRKTIQDGW 245

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +             R SDH P+ +DYD
Sbjct: 246 IDDST-----------RFSDHAPVIMDYD 263


>gi|260791647|ref|XP_002590840.1| hypothetical protein BRAFLDRAFT_90010 [Branchiostoma floridae]
 gi|229276037|gb|EEN46851.1| hypothetical protein BRAFLDRAFT_90010 [Branchiostoma floridae]
          Length = 524

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/263 (9%), Positives = 70/263 (26%), Gaps = 41/263 (15%)

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +   + +   +    +  +           +   +H  + +R+  +     +     + 
Sbjct: 223 ENRKDIEQKGREWEIRMQETLGPTHVLFYSGTYGVLHVCVFIRRDLIWFCSVAEEDTVST 282

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            +FS+   +  + +     G     ++ H  S       +     +      +A  L   
Sbjct: 283 RAFSQIKTKGGLAVSFNFFGTSFLFINSHFTSG----DNKAKERIADYSKICEAINLPKV 338

Query: 195 ITQKKESLVP---------FVIAGDFNRKINYLGN-------------------NDDFWK 226
           I   + S  P             GD N ++++  +                   +D    
Sbjct: 339 IPVNQHSTDPNDCTSRFDCVFWFGDMNFRLDHERSKVEELIKHGHKSDYRELVAHDQLTN 398

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
            +   ++ + F + +       K   N    D              +          D+ 
Sbjct: 399 FMKKEEAFVGFKENQIRFPPTYKFDLNTDHYD---TSPKLRVPSYTDRVLYKCKKPGDVT 455

Query: 287 SRGK------RLSDHCPISIDYD 303
           +         ++SDH P+   ++
Sbjct: 456 ALNYSNVPSIKISDHRPVYAVFE 478


>gi|259909393|ref|YP_002649749.1| hypothetical protein EpC_27660 [Erwinia pyrifoliae Ep1/96]
 gi|224965015|emb|CAX56545.1| Endonuclease/exonuclease/phosphatase family protein, YafD [Erwinia
           pyrifoliae Ep1/96]
 gi|283479466|emb|CAY75382.1| UPF0294 protein yafD [Erwinia pyrifoliae DSM 12163]
          Length = 268

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 87/286 (30%), Gaps = 63/286 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + A +++++ WNI                K+  +D+  + Q     +A +V LQE  +  
Sbjct: 39  TAATRLKVLVWNIF---------------KQQRADWLSVLQNFGK-NAHLVLLQEAQTTP 82

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + + F    + +       +          + +A AV        ++    L       
Sbjct: 83  ELVR-FATTNYLVADQVPAFVLPQHPSGVMTLASAHAVYCC-PLREREPLLRLSKS---- 136

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  V      N + + V++IH  +F     + +             + L     Q 
Sbjct: 137 -----ALVTAYALPNDQVLMVVNIHAVNFSLGIDVYS-------------KQLGPIGEQI 178

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P ++AGDFN   +    N  +    +     +RF  +   +            +D
Sbjct: 179 VHHQGPVIMAGDFNAW-SRQRINALYRFAREMGLREVRFTDDHRRKAFGRP-------LD 230

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                        +      R SDH P+ +++DF
Sbjct: 231 FIFYRG---------------MGVAEASVLVTRASDHNPLLVEFDF 261


>gi|225445027|ref|XP_002280110.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1034

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  +     N           F   ID    +    +      +   N +
Sbjct: 92  DEPWCLGGDFNSTLYQGERNRQGRITPNMRRFAHIIDDLGLVDLPLQGGAFTWSGGLNNQ 151

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +   +D F++  +        +   +              SDH PI ++
Sbjct: 152 SWARLDRFLVSPSWLDKFSGVNQRRLPRPV----------SDHFPILLE 190


>gi|111020869|ref|YP_703841.1| exodeoxyribonuclease III, C-terminal [Rhodococcus jostii RHA1]
 gi|110820399|gb|ABG95683.1| possible exodeoxyribonuclease III, C-terminal [Rhodococcus jostii
           RHA1]
          Length = 91

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 26/96 (27%), Gaps = 16/96 (16%)

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAY 267
                + F   + P   +    +                          IDY +      
Sbjct: 2   DDLEREWFDSILSPRALVGVVRQHHPGVDGPYSWWSWLGQGFVNDTGWRIDYHLATPRLA 61

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +           D   +  +R+SDH P+ +DYD
Sbjct: 62  QAAVAAG-------TDREPAADRRMSDHAPVVVDYD 90


>gi|147801861|emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]
          Length = 1532

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 72/286 (25%), Gaps = 66/286 (23%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           +++SWN   L               +     +++ + ++   DIV +QE        +  
Sbjct: 508 KIISWNTRGLG--------------SRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFV 553

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                                        I V   + ++L +   L              
Sbjct: 554 GS-------VWTARNKEWVVLPACGASGGILVIWDSKKLLSEEVVLGSFS---------- 596

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            V +   ++G + + L                   S +L       L D           
Sbjct: 597 -VSVKFAMDGSEQFWLSAVYGP------------NSTALRKDFWVELSDIFGLSSPC--- 640

Query: 205 FVIAGDFNR---------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
           + + GDFN                +  D    I  N+ +    +      +  +      
Sbjct: 641 WCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELIDPPLRSASFTWSNMQEHPVCK 700

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +D F+      +   Q     +           +  SDH PI ++
Sbjct: 701 RLDRFLYSNEWEQLFPQSLQEVLP----------RWTSDHWPIVLE 736


>gi|321479408|gb|EFX90364.1| hypothetical protein DAPPUDRAFT_309679 [Daphnia pulex]
          Length = 132

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 34/136 (25%), Gaps = 36/136 (26%)

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPND 232
           + L   + +  +S  P +I GD N                         D F + +   +
Sbjct: 3   KKLLSELVKDLDSKKPVIICGDMNVAHQEIDIANPKSNKRNAGFTQEERDGFSELLKSVN 62

Query: 233 SLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNED 283
               F  +      A                  +DY ++ +              +Y   
Sbjct: 63  LTDGFRHKNPDVKGAYTFWTYMANARKKNIGWRLDYCLLSEKLSSNFCDCCHRHEVY--- 119

Query: 284 DIKSRGKRLSDHCPIS 299
                    SDHCP+ 
Sbjct: 120 --------GSDHCPVV 127


>gi|297287617|ref|XP_002803210.1| PREDICTED: synaptojanin-1-like [Macaca mulatta]
          Length = 1483

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 436 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 495

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 496 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 555

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 556 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 609

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 610 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 669

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 670 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 729

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 730 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 775


>gi|256773220|ref|NP_001157955.1| synaptojanin-1 isoform a [Mus musculus]
          Length = 1607

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 568 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 627

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 628 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 687

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 688 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 741

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 742 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 801

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 802 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 861

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 862 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 907


>gi|256773218|ref|NP_001038980.1| synaptojanin-1 isoform b [Mus musculus]
          Length = 1309

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|255576993|ref|XP_002529381.1| hypothetical protein RCOM_0623210 [Ricinus communis]
 gi|223531129|gb|EEF32977.1| hypothetical protein RCOM_0623210 [Ricinus communis]
          Length = 258

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 79/280 (28%), Gaps = 43/280 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++++N+            ++S     +   L      +    I+  Q       V  
Sbjct: 4   SLTVMTFNL-------YDDQPQDSPNSWETRRDLCISVITSYSPMILCTQ-----QGVKS 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   +    +  I+       +D H  I   K+ V +L+     L    S   + +
Sbjct: 52  QLDYLQQGLPGYDQFGISRKGSQDTSDEHCTIFYEKEKVELLEGGTFWLSDAPSVPGSMS 111

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             A    +       +++ +    +   ++L             Q   ++D +T ++  L
Sbjct: 112 WGAAVPCIATWAISFFLVPVDEVLYSLGNTLHPYLQA------CQLCTVED-LTHRRNQL 164

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
                +GD   K   L       + +                C   +       +D+ + 
Sbjct: 165 QDVFFSGDRGDKQGALEFLKLILRALCL--------------CWDRQTQDL--HVDWILF 208

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  LI      +  N D     G   S H PI  ++
Sbjct: 209 RGR---SLIPSLCEVVNDNID-----GYYPSSHYPIFAEF 240


>gi|281183225|ref|NP_001162509.1| synaptojanin-1 [Papio anubis]
 gi|159487296|gb|ABW97186.1| synaptojanin 1, isoform 1 (predicted) [Papio anubis]
          Length = 1575

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|149059821|gb|EDM10704.1| synaptojanin 1, isoform CRA_e [Rattus norvegicus]
          Length = 1529

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 520 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 579

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 580 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 639

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 640 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 693

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 694 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 753

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 754 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 813

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 814 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 859


>gi|148671895|gb|EDL03842.1| mCG11444, isoform CRA_a [Mus musculus]
          Length = 1128

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 120 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 179

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 180 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 239

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 240 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 293

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 294 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 353

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 354 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 413

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 414 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 459


>gi|97537309|sp|Q62910|SYNJ1_RAT RecName: Full=Synaptojanin-1; AltName: Full=Synaptic
           inositol-1,4,5-trisphosphate 5-phosphatase 1
          Length = 1574

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|3367736|emb|CAA07267.1| DeltaSAC-synaptojanin1 [Rattus norvegicus]
 gi|149059818|gb|EDM10701.1| synaptojanin 1, isoform CRA_b [Rattus norvegicus]
          Length = 908

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 128 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 187

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 188 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 247

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 248 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 301

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 302 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 361

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 362 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 421

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 422 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 467


>gi|209870039|ref|NP_445928.2| synaptojanin-1 [Rattus norvegicus]
 gi|63237149|gb|AAB60525.2| 145 kDa synaptojanin isoform [Rattus norvegicus]
 gi|149059819|gb|EDM10702.1| synaptojanin 1, isoform CRA_c [Rattus norvegicus]
          Length = 1292

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|41018346|sp|Q8CHC4|SYNJ1_MOUSE RecName: Full=Synaptojanin-1; AltName: Full=Synaptic
           inositol-1,4,5-trisphosphate 5-phosphatase 1
          Length = 1574

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|33438169|dbj|BAC41456.2| mKIAA0910 protein [Mus musculus]
          Length = 1582

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 536 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 595

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 596 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 655

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 656 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 709

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 710 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 769

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 770 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 829

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 830 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 875


>gi|119626224|gb|EAX05819.1| CCR4-NOT transcription complex, subunit 6-like, isoform CRA_b [Homo
           sapiens]
          Length = 475

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/232 (9%), Positives = 66/232 (28%), Gaps = 35/232 (15%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 159 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 218

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 219 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 278

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 279 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 338

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY 217
              +       +   + + + +  + +        + +P V+  D N   + 
Sbjct: 339 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDS 390


>gi|284042374|ref|YP_003392714.1| endonuclease/exonuclease/phosphatase [Conexibacter woesei DSM
           14684]
 gi|283946595|gb|ADB49339.1| Endonuclease/exonuclease/phosphatase [Conexibacter woesei DSM
           14684]
          Length = 383

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/365 (10%), Positives = 77/365 (21%), Gaps = 70/365 (19%)

Query: 6   VLALVFFLVPCTASVAQKVRLVSWN-------------INTLSEQEGVSLWKNSVKRTTS 52
           ++ L     P  A+    V +++ N             I  L  ++    +  +     +
Sbjct: 19  LMVLGGVAAPAGANGGDSVTVMTRNVYLGGDITRPLTAIQGLPPEQQGPAFVAANTTLRA 78

Query: 53  ---------DYTLLRQYAKNLDADIVFLQEMG---------------SYNAVAKVFPKNT 88
                        L      L  D+V LQE+                 Y+ +  +     
Sbjct: 79  IVDQTNFPLRSQRLAHEIATLKPDLVGLQEVALWRSGPLDGRPATTVDYDFLQSLLDDLA 138

Query: 89  WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                     +      S   +  A     +                  +  G   A  +
Sbjct: 139 ALGEPYDVVHVQQESDVSGPAVRAAGLQNIRLTMRDVALKRAGAGVRVLASGGGNYAARI 198

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK------DWITQKKESL 202
            + + G+ +  +  +  +   + S E  +    + L  Q   +               + 
Sbjct: 199 PLVVAGQSLSFIRGYNWADVRVGSKEFRFIN--THLESQLSDVAYAQAAELLAGAAAPAR 256

Query: 203 VPFVIAGDFNRKINYLGNN--------DDFWKTIDPNDSLIRFPKEKDS----------- 243
            P V+  D N                 D +            + +   +           
Sbjct: 257 KPVVVVCDCNSDPLDASRKPGERYAHQDPYLLITRTGGFADAWLRFAPAALGFTSGLSEL 316

Query: 244 --RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY----NEDDIKSRGKRLSDHCP 297
                A         ID           L                          SDH  
Sbjct: 317 VNDTPAQAFAAFDHRIDMVFGRDADGSSLPVNWGWVTGRNPLNRTPTTPIGRLWPSDHAG 376

Query: 298 ISIDY 302
           + I+ 
Sbjct: 377 VVINL 381


>gi|312067992|ref|XP_003137004.1| hypothetical protein LOAG_01417 [Loa loa]
 gi|307767828|gb|EFO27062.1| hypothetical protein LOAG_01417 [Loa loa]
          Length = 394

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 67/215 (31%), Gaps = 30/215 (13%)

Query: 21  AQKVRLVSWNI---NTLSEQEGVSLWKNSVKR-----TTSDYTLLRQYAKNLDADIVFLQ 72
              +R+ S+N+    T  +   + +      R       + + L  +    + ADI  LQ
Sbjct: 33  GNPLRICSYNVLCQQTACKTPELYIHLTKSGRAYELTWENRWRLFSREFAMIAADIFCLQ 92

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+         F       F +   L  + KR  +     AI  +     +  +      
Sbjct: 93  EVQ-----YDHFEYFFKPYFEAAGFLGKYKKRTHSLMDGCAIFYKSHFQLLHYRDIEYYV 147

Query: 133 AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
             DS     N   + + ++   +G++    + HL                  +   Q   
Sbjct: 148 NSDSVLDRDNVGQL-VRLKDMRSGREFCTANTHLLF----------NKRRGDVKLAQLAV 196

Query: 191 LKDWITQKKESLV----PFVIAGDFNRKINYLGNN 221
           L   I Q+         P+++ GDFN +      N
Sbjct: 197 LLANIDQECGPESGKECPYILCGDFNIQPYSPLYN 231


>gi|16415984|emb|CAD01106.1| hypothetical protein [Neurospora crassa]
          Length = 249

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 67/290 (23%), Gaps = 49/290 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P   S    VR VS+NI   +    V   +   +R       L       D+  + LQE+
Sbjct: 7   PAPGSAQLHVRFVSFNIR-FATDNPVPGEQPWTERRPRLCAQLNFLTSGHDSTFLCLQEV 65

Query: 75  GSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                +  +     +W            +   S           +          P    
Sbjct: 66  LYSQLLDIQDSLGPSWSHIGRGREDGKLAGEFSPIFFRVDEWDCEDWKTYWLSETPERP- 124

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
              +     R               V+ +      F    +     S  L+   A   + 
Sbjct: 125 SIGWDAVLERIVTVGSFRHKTTSKAVIVMSTH---FDHRGQIAREESSKLILMLASEWRR 181

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              + K                                           +  +  +    
Sbjct: 182 THDELKYGNRDI-------------------------------------TYTSFGEPDEE 204

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ID+  +       LI   F  +    DD    G  LSDH PI +D +
Sbjct: 205 PKTIDFLFV--QRPPTLILRLFGILPNKFDD----GVFLSDHRPIFVDME 248


>gi|308506953|ref|XP_003115659.1| hypothetical protein CRE_18436 [Caenorhabditis remanei]
 gi|308256194|gb|EFP00147.1| hypothetical protein CRE_18436 [Caenorhabditis remanei]
          Length = 650

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 69/217 (31%), Gaps = 17/217 (7%)

Query: 16  CTASVAQKVRLVSWNIN---------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
             A    +  + S+N+           L                   +  L++     DA
Sbjct: 284 NPAIKTSQFTICSYNVLCQKTIARTSYLYRHLKSCENF---LEWNHRWKGLQEELPTFDA 340

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-- 124
           D++ LQE+   +      P      +    +    +++    D   AI  R +    +  
Sbjct: 341 DVLGLQEVQVDHFEEHFEPFMRKHGYEGIYKQKYGTEQ---KDDGCAIFYRPEKFERVGY 397

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           Q+    +      +R    + + L   I G+ I V + HL        ++          
Sbjct: 398 QEVNYFISPNSISNRENIGQILALRCRITGEIILVANTHLLFNEERGDVKLAQLAILFAS 457

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
             + +      TQ K S+ P ++ GDFN + N    +
Sbjct: 458 IYKMRSDIGLSTQFKNSIPPVLVMGDFNMEPNSKIYD 494


>gi|306822270|ref|ZP_07455651.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
 gi|309802827|ref|ZP_07696929.1| endonuclease/exonuclease/phosphatase family protein
           [Bifidobacterium dentium JCVIHMP022]
 gi|304554432|gb|EFM42338.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
 gi|308220580|gb|EFO76890.1| endonuclease/exonuclease/phosphatase family protein
           [Bifidobacterium dentium JCVIHMP022]
          Length = 362

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 68/277 (24%), Gaps = 58/277 (20%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           RL++ N+                 +  +D   +    K+   +++ LQE           
Sbjct: 140 RLMTCNVY----------------KGRADAQEIVDLVKSEHVEVLALQETTDD--FVDAL 181

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 182 NRAGIADYLPYSQVSSSDGVYGNG---------------LWSATPLGDPADDDVDSSASF 226

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V  NG    V  + + +     S    +  S          L +    K  +   
Sbjct: 227 MPGGTVSFNGGTTPVRFVSVHTTSPTRSRWQQWKRS----------LDELARMKFNTDTR 276

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       + +        ID+ V+D 
Sbjct: 277 YIFMGDFNATYDHTPFRDFLGNRFIDASRQAAGGFVFSWPADIDYVPTFAG-IDHIVLDS 335

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                 ++    +               SDH  +   
Sbjct: 336 GMLAGQVKSEKID--------------GSDHKALLAT 358


>gi|297707823|ref|XP_002830685.1| PREDICTED: LOW QUALITY PROTEIN: synaptojanin-1-like [Pongo abelii]
          Length = 1570

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVIALID 867


>gi|50312195|ref|XP_456129.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645265|emb|CAG98837.1| KLLA0F23551p [Kluyveromyces lactis]
          Length = 1093

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 84/310 (27%), Gaps = 45/310 (14%)

Query: 19  SVAQKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQEM 74
           +    ++++  ++N+N L++   +S W   +              K    DIV   LQE+
Sbjct: 562 TTTSNIKILCGTFNVNGLTKSVDLSEWLYPIG-------------KRYLPDIVVLGLQEV 608

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQ 126
              NA + +    +   F+        +K ++   +             V+   V  +++
Sbjct: 609 IELNASSILNVDTSKSQFWKDLVHSCLNKHENYIMLRAEQMSSLIILFFVKADKVGNVKR 668

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--------- 177
                         GN+ AV +  +        ++ HL +         +          
Sbjct: 669 VEGSSKKTGLGGMTGNKGAVAIRFDYGSTSFCFINAHLSAGVNNVEERRSDYESITKGIS 728

Query: 178 -----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                       +     L   I    E +   +   D N  ++ L  +D     +    
Sbjct: 729 FSRSKRIDHHNSTFWLGDLNYRIELPNEKVRSILSLPD-NADLDKLLEHDQLTSEMASES 787

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGK 290
               F +         K        D     +      +  +  +               
Sbjct: 788 VFKGFMEPSIQFRPTYKYDHGTDRYD---TSEKARIPSWTDRILYKGENLQPMAYSDAKL 844

Query: 291 RLSDHCPISI 300
            LSDH P+  
Sbjct: 845 NLSDHKPVYA 854


>gi|9937209|gb|AAG02341.1|AF205939_1 synaptojanin 1 [Lampetra fluviatilis]
          Length = 1291

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/344 (11%), Positives = 94/344 (27%), Gaps = 65/344 (18%)

Query: 19  SVAQKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADI--VFL 71
           +  +++R+   +WN+N       ++    ++     D       +   D    D+  +  
Sbjct: 535 THPKRLRVAIATWNVNGGKTMRSIAFKHQTLSDWLLDNHKQAAISTFQDDTPVDVFAIGF 594

Query: 72  QEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRV 123
           QEM   NA   V      +  W +        +H      ++        + +R  +   
Sbjct: 595 QEMVELNAGNIVSASTENQKRWSVELQKTISRDHKYILVTSEQLVGVCLFVFLRPHHAPH 654

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           ++               GN+  V + +++    +  +  H  +                 
Sbjct: 655 VRDVAVDTVKTGMGGATGNKGGVAIRLQMYSSSLCFVCSHFAAGQSHT------RERNED 708

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------DDFWKTIDP 230
            ++ A+ +   + +   S       GDFN +I+  G+                  + +  
Sbjct: 709 YAEIARKISFPMGRGLFSHDYVFWCGDFNYRIDLSGDEVKELVRQKNWETLQQADQLVQQ 768

Query: 231 NDSLIRFPKEKDSRCNANKNLRN-----------KIPI----DYFVMDQNAYKFLIQESF 275
            +    F    + R N     +            K  I    D  +  ++ + F      
Sbjct: 769 RNLSAVFRGFHEGRTNFPPTYKYDIFSDDYDTSEKCRIPAWTDRVLWYRHKWAFEKSADE 828

Query: 276 SEI----------------LYNEDDIKSRGKRLSDHCPISIDYD 303
            ++                            + SDH P+    D
Sbjct: 829 LDLLNLPAGGEPRLPHLWNPGTLIHYSRAELKTSDHRPVIALID 872


>gi|224102549|ref|XP_002312721.1| predicted protein [Populus trichocarpa]
 gi|222852541|gb|EEE90088.1| predicted protein [Populus trichocarpa]
          Length = 493

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/264 (9%), Positives = 67/264 (25%), Gaps = 42/264 (15%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNTWCIFYSTERLINHSKRDSNND 109
             + +  K +D+DI+ LQ++ +        ++ +         ++      +        
Sbjct: 217 RSIMEVLKEVDSDILALQDVKADEEKGMSPLSDLAASLGMKYVFAESWAPGY-------- 268

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFC 168
                A+  K      +   +   +D       R  ++  + +    ++      L    
Sbjct: 269 ---GNAILSKWPIKRWKVQKIANDEDF------RNVLKATIYVPWAGEVDFYCTQLDHLD 319

Query: 169 FLDSL--ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
               +        S  +         + +     S   ++    +   I       +  K
Sbjct: 320 ENWRMKQIGAMIKSNDMTPHILAGGINSLDGSDYSSERWMDIVKYYEDIGKPTPRIEVTK 379

Query: 227 TIDPNDSLIRFPKEKD--------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
            +     +       +           N     +    +DY +    +    +  S+S I
Sbjct: 380 FLKGKGYVDAKEYAGECEPVVIVAKGQNVQGTCKYGTRVDYMLASPYSPYKFVPGSYSVI 439

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
                         SDH  +  D 
Sbjct: 440 SSKGT---------SDHHIVKADI 454


>gi|313676514|ref|YP_004054510.1| endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126]
 gi|312943212|gb|ADR22402.1| Endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126]
          Length = 352

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 75/270 (27%), Gaps = 45/270 (16%)

Query: 33  TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92
            L  +  + L   +V +   ++  L         D+V L E   +               
Sbjct: 97  NLDFKPSLKLLIANVYQENREWEKLSCMIDREKPDVVLLLETDEWW----------KNKC 146

Query: 93  YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152
            S+       +   + +    + +  K      Q + L+  +           +E  + +
Sbjct: 147 NSSFGREYVYQVLEDRENTYGMLLYSKLELRNTQIHYLVKDEIPS--------IETDIIL 198

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
             + I +  IH +     ++ ++T   +          +     +      P ++AGD N
Sbjct: 199 EKRAIKLYAIHPEPPVPSENPKSTARDA---------EILLVGKKTNADQKPTIVAGDLN 249

Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                          +  +  L              K+   + P+D+     +       
Sbjct: 250 DVAWSYTTEL----FLKISGLLDPRRGRGFYSSFHAKHALARWPLDHIFCSGH------- 298

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +   ++K      SDH PI +  
Sbjct: 299 -------FRLQNMKRMESIGSDHFPIYVQL 321


>gi|90023311|ref|YP_529138.1| histidine kinase [Saccharophagus degradans 2-40]
 gi|89952911|gb|ABD82926.1| histidine kinase [Saccharophagus degradans 2-40]
          Length = 261

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/271 (10%), Positives = 70/271 (25%), Gaps = 60/271 (22%)

Query: 57  LRQYAKNLDADIVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  +  + DADI+ LQ++ +        +F    +  ++            S    +  +
Sbjct: 19  LYDWIADQDADIICLQDLRALEPELDNDIFHPEGYFAYFFD----------SGVKHYNGV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +             +                V++ G+ + +          L    
Sbjct: 69  AIYTRYQPKALIYGLGFSSG---------------VDMEGRYLQIDFERYSIGTLLAPSA 113

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223
              + S  +  Q     +  + +       ++  G++N         +            
Sbjct: 114 VNPAESQEVKIQFFDDFQALLHKITRKRRNYIFCGNWNMAHTRKDVENWARNEDQSGFLG 173

Query: 224 ----FWKTIDPNDSLIRFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQ 272
               +   +          +             +          +D+ V+ +   K +  
Sbjct: 174 HEQQWMNQLFRQLGYADAFRLAVPDAGEYSWWPSGEVGVADGWRVDHQVISEGLIKKV-- 231

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    E     + K  S H P+ +DYD
Sbjct: 232 ---------EYAAMYKTKTFSSHLPVIVDYD 253


>gi|39652285|dbj|BAD04856.1| reverse transcriptase [Takifugu rubripes]
          Length = 1154

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 73/292 (25%), Gaps = 73/292 (25%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           ++ NI         S       R+      +  +  +  +D+  LQE           P 
Sbjct: 1   MTLNI---------STINVRSVRSRVRAQSVLSFLSSFKSDVFLLQEC--------GLPF 43

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                 +            SN + +  +A+  KN +VL +   ++             A+
Sbjct: 44  LNHYRQWEEMWPQTSLWSGSNENRNDGVAILIKNPQVLVKGSTVVKNGR---------AL 94

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
              +   G+   +L+I+  +                        L + +       VP V
Sbjct: 95  LTHLTFMGQDFKILNIYGFNEKNDRYD-----------------LLEDLQSHMLGRVPLV 137

Query: 207 IAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           + GDFN  ++                        +     D        ++     + + 
Sbjct: 138 VGGDFNCILSRKDRRRTGEDFKVDKTSVLLQGICRDFKLQDCFKTMHPREEGFTWFSGDG 197

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                IDY                        D +      SDH  +S    
Sbjct: 198 TRASRIDYVFTRD---------------CPATDARLTPVFFSDHLMLSCTLS 234


>gi|147800480|emb|CAN68584.1| hypothetical protein VITISV_043904 [Vitis vinifera]
          Length = 1283

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 22/129 (17%)

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPND 232
           +      + + +     +    P+ + GDFN  ++    N           F + ID   
Sbjct: 602 NERECLWEEIGEIRGIWE---EPWCVGGDFNVILSQRERNXQGRITATMRRFAQVIDELG 658

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +    +      +   N ++   +D F++                 ++    K     +
Sbjct: 659 LVDLPLQGGGYTWSGGPNNQSWARLDRFLVTP----------CWLDQFSSVIQKRLSXPV 708

Query: 293 SDHCPISID 301
           SDH P+ ++
Sbjct: 709 SDHFPVLLE 717


>gi|307544755|ref|YP_003897234.1| endonuclease/exonuclease/phosphatase [Halomonas elongata DSM 2581]
 gi|307216779|emb|CBV42049.1| endonuclease/exonuclease/phosphatase [Halomonas elongata DSM 2581]
          Length = 271

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 62/206 (30%), Gaps = 22/206 (10%)

Query: 98  LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGK 155
           + +H    S+     +   R   V   Q +   L   D F+    R         +  G+
Sbjct: 1   MTSHEVGRSSYQESYSYLWRDSAVEYTQGAVVYLDPGDEFA----REPYLAEFADKETGQ 56

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
           ++ +  +H+                 +   +Q   +  W+++      P +IAGD+N   
Sbjct: 57  EVALAAVHIVYG--------DSRADRTPEIRQLAEIWGWMSEVYP-DTPRLIAGDYNLAP 107

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
           ++     + W+ +    ++        +   +  + +     D    D            
Sbjct: 108 DH-----EAWQMLRDQGAVPAITSG--ATTLSTTDGQYSNLYDNLWHDAAVLNVTGDGIV 160

Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301
                     +     +SDH PI + 
Sbjct: 161 RFPELLGLTHEEARDIVSDHAPIFVT 186


>gi|255585432|ref|XP_002533410.1| conserved hypothetical protein [Ricinus communis]
 gi|223526739|gb|EEF28968.1| conserved hypothetical protein [Ricinus communis]
          Length = 447

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/222 (10%), Positives = 69/222 (31%), Gaps = 17/222 (7%)

Query: 17  TASVAQKVRLVSWNI---NTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFLQ 72
            ++   +V +VS+NI      S    +                L+ +   + +A I+  Q
Sbjct: 85  FSAYKDRVVVVSYNILGVENASNHPDLYFKIPPKFLDWDRRKELICEEINHYNAGILCFQ 144

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-----VLQQS 127
           E+  ++ +  +  ++++   Y                      + ++N+      +    
Sbjct: 145 EVDRFDDLDCLLQEDSFRGVYKARTGEACDGCAIFWKDMLFSLLHEENIEFQSFGLRNNV 204

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             L   K + S++ + + ++       ++  V ++H+        ++          + +
Sbjct: 205 AQLCVLKMNESQSKSDQFMQSSETSKSRRFVVGNVHVLFNPKRGDIKLGQVRLFLERAYK 264

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                      +   +P V+ GD N               ++
Sbjct: 265 LSQ--------EWGGIPVVLGGDLNSLPQSAVYQFLASSELN 298



 Score = 43.8 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 17/67 (25%)

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                     + +      +DY    Q      + E+    +          K  SDH  
Sbjct: 379 RDNHGEPLATSYHSMFMGTVDYIWHTQELIPVRVLETLPIDILRRSAGLPNEKWGSDHLA 438

Query: 298 ISIDYDF 304
           +  +  F
Sbjct: 439 LVCELAF 445


>gi|147785638|emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera]
          Length = 1284

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 88/289 (30%), Gaps = 68/289 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            ++++SWN+  L               + +   +++ + ++ + D+V +QE    N   +
Sbjct: 62  PMKIISWNVRGLG--------------SRNKRRMVKDFLRSENPDVVMIQETKKENCDRR 107

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 W +       +  S           I +   +  + ++   +            
Sbjct: 108 FVGS-VWTVRNKDWVALPXSGASG------GILIIWDSKNLRREEVVIGSFS-------- 152

Query: 143 RRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
              V +   ++G   +W+  ++  +             S SL       L D        
Sbjct: 153 ---VSVKFSLDGCGPLWISAVYGPN-------------SPSLRKDFWVELFDIYGLTYP- 195

Query: 202 LVPFVIAGDFNR---------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
              + + GDFN            +   +  DF   I   + L    +      +  +   
Sbjct: 196 --LWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFIRECELLDPPLRNASFTXSNMQESP 253

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F+                +L+ +   ++  +R SDH PI +D
Sbjct: 254 VCXRLDRFLYSNE----------WGLLFPQGLQEALIRRTSDHWPIVMD 292


>gi|332210909|ref|XP_003254556.1| PREDICTED: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2
           [Nomascus leucogenys]
          Length = 1221

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 391 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 448

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 449 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 504

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 505 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLSAFDISLRF-- 562

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 563 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 619

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 620 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 675

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 676 IVT-----SDHSPVFGTFE 689


>gi|301783555|ref|XP_002927193.1| PREDICTED: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase
           2-like, partial [Ailuropoda melanoleuca]
          Length = 1248

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 418 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 475

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 476 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 531

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 532 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLSAFDISLRF-- 589

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 590 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 646

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 647 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 702

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 703 IVT-----SDHSPVFGTFE 716


>gi|281340523|gb|EFB16107.1| hypothetical protein PANDA_016952 [Ailuropoda melanoleuca]
          Length = 1242

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 412 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 469

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 470 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 525

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 526 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLSAFDISLRF-- 583

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 584 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 640

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 641 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 696

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 697 IVT-----SDHSPVFGTFE 710


>gi|226226595|ref|YP_002760701.1| hypothetical protein GAU_1189 [Gemmatimonas aurantiaca T-27]
 gi|226089786|dbj|BAH38231.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 549

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 80/307 (26%), Gaps = 36/307 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A     +R+  WN+                + +     +  +    +  D+V L E+  
Sbjct: 256 FAPSPGALRVAQWNV---------------SEGSFRKPEMHARLLAAVMPDVVMLDEVYE 300

Query: 77  Y---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
               +++ + F           + ++  S       +       +    +    Y     
Sbjct: 301 QVTADSLRRFFDLPALRALGPWQFVLGGSGGRQRTVVAARRRAVRPVESMAAMRYIDGSL 360

Query: 134 KDSFSRAGNRRAVELLVEIN------GKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQ 186
                         + +E        G  + V             S     S   +L   
Sbjct: 361 DSLRRITPPAGHRLIDIEEAAQISSVGAWVDVHGTETMFVPLDLQSGGYAGSVHDNLRVL 420

Query: 187 QAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPK 239
           Q + ++ +I  +       P V+ GDFN   ++              ++     L    +
Sbjct: 421 QVEAIRRYIRAEIAQRGDFPLVVGGDFNAVGSFRSVRSLIPEPTEHPSLRLAQVLRLAEQ 480

Query: 240 EKDSRCNANKNLRNKIPIDYFVMD----QNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
              +  +      +   +D  +         + F  ++    +L      +     +SDH
Sbjct: 481 SMVTWQSVEAAQFSPGQLDLTLFRGFNQNGGFVFTTEDLSDRLLAKLRMTRETSASVSDH 540

Query: 296 CPISIDY 302
             +  D 
Sbjct: 541 LIVVTDL 547


>gi|194213478|ref|XP_001917519.1| PREDICTED: similar to inositol polyphosphate phosphatase-like 1
           [Equus caballus]
          Length = 1236

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 406 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 463

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 464 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 519

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 520 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLSAFDISLRF-- 577

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 578 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 634

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 635 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 690

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 691 IVT-----SDHSPVFGTFE 704


>gi|300794196|ref|NP_001178105.1| inositol polyphosphate phosphatase-like 1 [Bos taurus]
 gi|297483310|ref|XP_002693481.1| PREDICTED: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase
           2-like [Bos taurus]
 gi|296479850|gb|DAA21965.1| phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2-like [Bos
           taurus]
          Length = 1264

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 434 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 491

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 492 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 547

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 548 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLTLGDRQLSAFDISLRF-- 605

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 606 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 662

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 663 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 718

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 719 IVT-----SDHSPVFGTFE 732


>gi|126735526|ref|ZP_01751271.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2]
 gi|126714713|gb|EBA11579.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2]
          Length = 326

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 59/251 (23%), Gaps = 49/251 (19%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
            Y  L    +  D D++ L E  +  A A       +    S              D H 
Sbjct: 112 RYDDLINIIEREDPDVLLLMETDALWAEALESTLARYATVKSYIE-----------DDHY 160

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
            +    +   V  +    +       +A  R         NG +   + +H +     + 
Sbjct: 161 GMIFATRLDVVSTEFIWPIDDDTPAVKAILRAP-------NGPEFNFIGLHPRPPVPGND 213

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
            E                +K+          P +  GDFN       +     K      
Sbjct: 214 TETRDR-----------QIKNAALMTSSMDRPTICMGDFNDV-----SWSWTTKRFKEYG 257

Query: 233 SLIRFPKEKD-SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +       +             ++PID   + +N                          
Sbjct: 258 NFREPRIGRGMISSFHADYPFMRLPIDQLFVTENVG--------------LVSFARLENF 303

Query: 292 LSDHCPISIDY 302
            SDH P+    
Sbjct: 304 GSDHFPMIATI 314


>gi|1586823|prf||2204390A synaptojanin
          Length = 1558

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 95/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++ +  ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAKFNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|332308357|ref|YP_004436208.1| hypothetical protein Glaag_4016 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175686|gb|AEE24940.1| hypothetical protein Glaag_4016 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 325

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/301 (9%), Positives = 74/301 (24%), Gaps = 50/301 (16%)

Query: 6   VLAL---VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           + AL   +++++P T  V   V+++                +   KR+            
Sbjct: 68  LFALGYQIYWILPYTTIVKPSVKVM---------------EQPDPKRSIKIINANVLMTN 112

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                ++ L E    + +  +     W             + +   +    + +  +   
Sbjct: 113 REAPKLIKLVEQEQPHILVTLESNQWWQDALGPLHGAYPYRVNIPLENLYGMHIFSRLPL 172

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                             G      +    +G++I    +H       ++         +
Sbjct: 173 SEI-------TTAERVEKGVPSVHCIATLESGEQIRCHFVHPAPPSPTEN------EEAT 219

Query: 183 LLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
               +   L   I Q       P +++GD N               +  +          
Sbjct: 220 ERDIELLGLAKEIAQNDSESALPVLVSGDLNDVAWSPT----TQAFLRISGLCDPRIGRG 275

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                  +++  + P+D+     +     +                     SDH P+  +
Sbjct: 276 AFNTFHAQHVFARWPLDHMFHSDDFALVSLSRLPEI--------------GSDHFPLLTE 321

Query: 302 Y 302
            
Sbjct: 322 L 322


>gi|147816091|emb|CAN72890.1| hypothetical protein VITISV_022310 [Vitis vinifera]
          Length = 1356

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 19/108 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ I GDFN  +     +           F +T++    +    +  D   N   N +
Sbjct: 185 EDPWCIGGDFNITLFSSERSSQRRISSAMRKFAETVNDLGLVDLPLQGGDFTWNGGLNNQ 244

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +D F++  +              ++  +     + +SDH PI +
Sbjct: 245 TWARLDRFLVSPS----------WIDQFSGINQCRLPRPVSDHFPIML 282


>gi|316972689|gb|EFV56354.1| angel protein [Trichinella spiralis]
          Length = 583

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/367 (9%), Positives = 91/367 (24%), Gaps = 82/367 (22%)

Query: 19  SVAQKVRLVSWNI--NTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           S +    + S+N+   TL  +               T     L +    + AD+  LQE+
Sbjct: 213 SGSAGFSVCSYNVLSQTLISTNNNNYRRCNPQHLNWTYRRNCLEKMIDEISADVYCLQEV 272

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              +      P   +  + +  +                    V  K V +      ++ 
Sbjct: 273 DEADLKRWFVPYFYYRGYSTIYKQKGDRPDGILIAWKRSVFSMVSVKGVELTIPGRIVVP 332

Query: 133 AKDSFSRAGNRRAVELL--VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            +         RA++    +    + + V + HL++      ++           ++   
Sbjct: 333 YQIGLIACLRIRALDARSDLTEAQRTVVVANTHLRADQINGDVKLIQLAILLAHVKKLAT 392

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
           ++D     +      V+ GDFN        +                   +++ +     
Sbjct: 393 VEDG-NSGQRQQRAVVMCGDFNSTALSPVLSFILNGVLFYPFVDKYHVSGYFRKVGSGLQ 451

Query: 234 LIRFP----------------KEKDSRCNANKNL-------------------------- 251
               P                +   +  +A+                             
Sbjct: 452 FPLLPPELGIDESNCCFKEDAQATPTTTHASSFRKASLGHTFAFDSVYHFSEHEEKVSFA 511

Query: 252 RNKIPI-DYFVMDQ------------NAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCP 297
                I D+                    +++ +  F     ++ +         SDH P
Sbjct: 512 SPNHHIVDHIFYSSPTDEQAAGSVPIGLLEWVRRIDFRSFQMDKLNKSMPNSIHGSDHFP 571

Query: 298 ISIDYDF 304
           +   +++
Sbjct: 572 VGALFNY 578


>gi|315282772|ref|ZP_07871102.1| exodeoxyribonuclease III [Listeria marthii FSL S4-120]
 gi|313613576|gb|EFR87390.1| exodeoxyribonuclease III [Listeria marthii FSL S4-120]
          Length = 108

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 26/97 (26%), Gaps = 20/97 (20%)

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNA 266
            +       +        +  F        +A      +           IDYFV+ +  
Sbjct: 22  GFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERL 81

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              L+       +             SDHCP+ ++ +
Sbjct: 82  KDKLVDAKIHADVL-----------GSDHCPVELELN 107


>gi|227494471|ref|ZP_03924787.1| hypothetical protein HMPREF0044_0325 [Actinomyces coleocanis DSM
           15436]
 gi|226832205|gb|EEH64588.1| hypothetical protein HMPREF0044_0325 [Actinomyces coleocanis DSM
           15436]
          Length = 302

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 85/315 (26%), Gaps = 55/315 (17%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
            L+SWNI    +            R  ++   L Q     +   +  QE+  Y   +++ 
Sbjct: 6   TLLSWNIQ-FGKTNTRQNGYTPSTRLETELDNLLQATSLQNLTALACQEVDRYQKRSQLN 64

Query: 85  PKN-------TWCIFYSTERLINHSKRDSNNDIH---------------TAIAVRKKNVR 122
            +            F        +   +    +                + + +  K   
Sbjct: 65  NQPTEIWNTLRKYGFQWASYAPTYLGLNIGIRLRPATFFPLTWQRLMPASGVFLALKEKP 124

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +  Q  PL  +   +     +    L      K      I  +S   L +  N+   + +
Sbjct: 125 LQAQFLPLQKSPVRWHNFHTKALKNLAWWHPFKLTKGKPIFGESRVALIAETNSTIYATT 184

Query: 183 LLSQ-------QAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
            L         Q   L  ++ +  +       + GDFN               ++     
Sbjct: 185 HLEIHPETAEKQLVTLLTYLQKLCDETRKDTYLLGDFN---------------LEAKTVT 229

Query: 235 IRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNED-DIKSR 288
               + K+   +        +      IDY V       +   +S +   +       S 
Sbjct: 230 RIITQLKNENMHIATTPSFPVVAPKKSIDYCVY---IRPWGKIDSPTTTAFTPQMHATSL 286

Query: 289 GKRLSDHCPISIDYD 303
              +SDH P+ I  +
Sbjct: 287 KSPISDHSPVLITLE 301


>gi|168050888|ref|XP_001777889.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670754|gb|EDQ57317.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 278

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 82/314 (26%), Gaps = 63/314 (20%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           + +    V +V+WN+N         L+  S +              + D  +V LQE  +
Sbjct: 1   STAADLNVYVVTWNMNGKVPNNFADLFDVSGE--------------SHDFFVVGLQEAPN 46

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
           ++A   +              ++   +    +        R     +       +  K  
Sbjct: 47  FDAKTCISEILGDKYCLVESSVLMSLQLFIFSK-------RSLKPFISGVKVDKVWEKGL 99

Query: 137 FSRAG-NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
               G  + A  + +    K    +  HL +          +  +    + Q   +   +
Sbjct: 100 SGIVGKQKGAAAVRLHFGDKSFLFITSHLAA----------HESNLKARNAQCAHICHSL 149

Query: 196 TQKKESLVPFVIAGDFNRKINYL-----------------GNNDDFWKTIDPNDSLIRFP 238
             +       +  GD N ++                       D    ++    +   F 
Sbjct: 150 FARSSESDVVIWLGDLNYRLELPRRFVQNSIKNKNLQEQLWAKDQLSVSLRKGQAFKGFH 209

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-------- 290
           +         K        D         K  +      ILY   ++K+  +        
Sbjct: 210 EGPLLFAPTFKYDVGTDNYD------TGPKERVPSWTDRILYKTTNVKAELRSYDAISSV 263

Query: 291 RLSDHCPISIDYDF 304
           + SDH P+     F
Sbjct: 264 KTSDHRPVEAHLTF 277


>gi|301768439|ref|XP_002919639.1| PREDICTED: synaptojanin-1-like [Ailuropoda melanoleuca]
          Length = 1695

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 92/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-------AKNLDADIV 69
           S  +K+R+   +WN+N   +   ++    ++     D   L          +K  D   +
Sbjct: 652 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIHEFQDKRSKPTDIFAI 711

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 712 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 771

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 772 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 825

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 826 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 885

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 886 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 945

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                        S     +    +   G+   + SDH P+    D
Sbjct: 946 EDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 991


>gi|281345158|gb|EFB20742.1| hypothetical protein PANDA_008280 [Ailuropoda melanoleuca]
          Length = 1571

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 92/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-------AKNLDADIV 69
           S  +K+R+   +WN+N   +   ++    ++     D   L          +K  D   +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIHEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                        S     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|238883107|gb|EEQ46745.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 497

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 62/242 (25%), Gaps = 18/242 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++S+NI   +         N    + +    +L    K+ +ADI+ LQE+       
Sbjct: 92  SIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQILLDELKHYNADIMCLQEVDKVQYEG 151

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSRA 140
               +     + +     N                 + ++   L Q      ++ S   A
Sbjct: 152 FWVSQLEKLGYSTRFYRNNTKNHGCVIVFRDKLFTCKHQSFIRLDQDLNQEASEKSLPPA 211

Query: 141 G---NRRAVELLVEI------------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                  A    +E                   +   HL    F        +       
Sbjct: 212 RIATTNIAFMAYLEFTPTFIKEYPCLEETNGFIIGTTHLFWHPFGTYERARQTYMLLYKF 271

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           ++ Q +   I    +        GDFN +           K I  +           +  
Sbjct: 272 REFQRVLRIIVGNSKR-FYSFFTGDFNSEPFDAPYRAITAKPIKFSGRSRNVLGCSLAYT 330

Query: 246 NA 247
            +
Sbjct: 331 YS 332


>gi|152149537|pdb|2V0R|A Chain A, Crystal Structure Of A Hairpin Exchange Variant (Ltx) Of
           The Targeting Line-1 Retrotransposon Endonuclease
 gi|152149538|pdb|2V0R|B Chain B, Crystal Structure Of A Hairpin Exchange Variant (Ltx) Of
           The Targeting Line-1 Retrotransposon Endonuclease
          Length = 240

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 72/293 (24%), Gaps = 75/293 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +      L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP- 256
             +I GDFN  ++ L        N D  +              +     + +    ++  
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTYVRVRD 198

Query: 257 -------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 GHVSQSKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 239


>gi|332666014|ref|YP_004448802.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332334828|gb|AEE51929.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 237

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/292 (11%), Positives = 69/292 (23%), Gaps = 70/292 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L++WN                                    DI+ + E      +   
Sbjct: 1   MKLITWNCQGAF-------------------RKKAAQILRHQPDILVVPECEHPEKL--- 38

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         + N + +  N+ I     V K         Y           A  +
Sbjct: 39  --------------VFNSTTQRPNDLIWFGDNVHKGLGVFSYGDYKF--QLHEQHNADLK 82

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + V        +  I   +    D              +Q             +  
Sbjct: 83  IILPIAVTGGQFDFTLFAIWANNRQDPDGQYVEQIWKALHHYEQLL-----------NSE 131

Query: 204 PFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLIRFPK--------EKDSRCNANKN 250
             ++ GDFN      +   +GN+    + +   +    + +        E D      +N
Sbjct: 132 RSILTGDFNSNKIWDRPRRVGNHSAVVEKLAEKNIYSVYHRYLNQEQGKENDPTFFLYRN 191

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 IDY       Y  +                 +    SDH P+ +++
Sbjct: 192 KDKSYHIDYCFTSAEFYHQVTAVEIGNY--------EQWINFSDHTPLIVNF 235


>gi|326930004|ref|XP_003211143.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A-like, partial [Meleagris gallopavo]
          Length = 629

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 81/317 (25%), Gaps = 52/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T      VS   +     T+D  ++           + LQE+ S     + 
Sbjct: 1   ITVVTWNVGTAMPPSDVSSLLHLNTGETNDADMIA----------IGLQEVNSKINKRLK 50

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       H    S   +   I +   +  ++  LQ             
Sbjct: 51  DALFTDQWSELFMDVLSPFHFVLVSTVRMQGVILLVFAKYYHLPFLQDIQTDCTRTGLGG 110

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + + I G  +  L+ HL +       +              Q  +      
Sbjct: 111 YWGNKGGVSVRLSIFGHMVCFLNCHLPA----HLEKAEQRKEDFATILHMQQFEGRAASG 166

Query: 199 KESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKEKD 242
                     GD N +I  L                    D          ++   +E  
Sbjct: 167 ILDHDLVFWFGDLNFRIESLDIRFVKYAIDSNILSQLWEKDQLNIAKSTWPVLSGFQEGP 226

Query: 243 SRCNANKNLR-------------NKIPIDYFVM---DQNAYKFLIQESFSEILYNED-DI 285
                                       D  +      ++     + S   +  ++    
Sbjct: 227 LNFPPTFKFDVGTNKYDSSAKKRKPAWTDRILWKIKSPSSGAGGRRPSRGVLTVSQLCYC 286

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 287 SHMEYMVSDHKPVAAIF 303


>gi|197101113|ref|NP_001124804.1| CCR4-NOT transcription complex subunit 6-like [Pongo abelii]
 gi|55725967|emb|CAH89761.1| hypothetical protein [Pongo abelii]
          Length = 435

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/232 (9%), Positives = 66/232 (28%), Gaps = 35/232 (15%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+ LQE+ +  
Sbjct: 181 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ 240

Query: 79  AVAKVFPKNTWCIF------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +             S +   +               V+K  V   Q 
Sbjct: 241 YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 300

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 301 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP 360

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY 217
              +       +   + + + +  + +        + +P V+  D N   + 
Sbjct: 361 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDS 412


>gi|332993730|gb|AEF03785.1| hypothetical protein ambt_11320 [Alteromonas sp. SN2]
          Length = 319

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 64/271 (23%), Gaps = 54/271 (19%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
           +     S    S      +Y+ + +       DI+ +QE+   +   +            
Sbjct: 96  NTISKFSFITFSKMTHNRNYSEIAKLIDCQKYDIIQVQEIPDLSVFLQA----------- 144

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154
                                    N +V      L+  K       ++  +   +  N 
Sbjct: 145 -------------------------NPKVSVNCNFLVNTKYENLVTFSKYPLSQQLISNQ 179

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           + + V          ++          +    Q   +K  I   ++   P ++AGDFN  
Sbjct: 180 EVVNVHLNFNNHVSLINVRGAKAITRANDR--QMNGVKRIIKAAEKLEGPVIVAGDFNAT 237

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--RNKIPIDYFVMDQNAYKFLIQ 272
                         +         +         +       I IDY             
Sbjct: 238 HFNSAILLMKKHFFNATIDSYFTSRHSSWPGEGRRLGLLGPWIQIDYIFFKG-------- 289

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 L + +         SDH PI   + 
Sbjct: 290 ------LESNNTFVHSESYGSDHYPIETTFS 314


>gi|68473535|ref|XP_719092.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans
           SC5314]
 gi|46440893|gb|EAL00194.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans
           SC5314]
          Length = 519

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 62/242 (25%), Gaps = 18/242 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++S+NI   +         N    + +    +L    K+ +ADI+ LQE+       
Sbjct: 114 SIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQILLDELKHYNADIMCLQEVDKVQYEG 173

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSRA 140
               +     + +     N                 + ++   L Q      ++ S   A
Sbjct: 174 FWVSQLEKLGYSTRFYRNNTKNHGCVIVFRDKLFTCKHQSFIRLDQDLNQEASEKSLPPA 233

Query: 141 G---NRRAVELLVEI------------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                  A    +E                   +   HL    F        +       
Sbjct: 234 RIATTNIAFMAYLEFTPTFIKEYPCLEETNGFIIGTTHLFWHPFGTYERARQTYMLLYKF 293

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           ++ Q +   I    +        GDFN +           K I  +           +  
Sbjct: 294 REFQRVLRIIVGNSKR-FYSFFTGDFNSEPFDAPYRAITAKPIKFSGRSRNVLGCSLAYT 352

Query: 246 NA 247
            +
Sbjct: 353 YS 354


>gi|68473302|ref|XP_719209.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans
           SC5314]
 gi|46441016|gb|EAL00316.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans
           SC5314]
          Length = 519

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 62/242 (25%), Gaps = 18/242 (7%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++++S+NI   +         N    + +    +L    K+ +ADI+ LQE+       
Sbjct: 114 SIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQILLDELKHYNADIMCLQEVDKVQYEG 173

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSRA 140
               +     + +     N                 + ++   L Q      ++ S   A
Sbjct: 174 FWVSQLEKLGYSTRFYRNNTKNHGCVIVFRDKLFTCKHQSFIRLDQDLNQEASEKSLPPA 233

Query: 141 G---NRRAVELLVEI------------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                  A    +E                   +   HL    F        +       
Sbjct: 234 RIATTNIAFMAYLEFTSTFIKEYPCLEETNGFIIGTTHLFWHPFGTYERARQTYMLLYKF 293

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           ++ Q +   I    +        GDFN +           K I  +           +  
Sbjct: 294 REFQRVLRIIVGNSKR-FYSFFTGDFNSEPFDAPYRAITAKPIKFSGRSRNVLGCSLAYT 352

Query: 246 NA 247
            +
Sbjct: 353 YS 354


>gi|262047327|ref|ZP_06020284.1| metal-dependent hydrolase [Lactobacillus crispatus MV-3A-US]
 gi|312977126|ref|ZP_07788874.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           crispatus CTV-05]
 gi|260572301|gb|EEX28864.1| metal-dependent hydrolase [Lactobacillus crispatus MV-3A-US]
 gi|310895557|gb|EFQ44623.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           crispatus CTV-05]
          Length = 290

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 82/276 (29%), Gaps = 48/276 (17%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           + Q  K  + D +F QE+ + +   + F  N           ++ +   + +    A+ +
Sbjct: 32  VIQTMKKQNPDCMFFQEIDTDS--TRSFHVNQVKKVEDDFPKMDSTFASNFHSAFLAVPL 89

Query: 117 RKKNVRVLQ---------------QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVL 160
              +  V                 + YP+           +R  V +   + NGK + ++
Sbjct: 90  NNPHGTVRSGLLSMSKYKMDSAIRRKYPVSSGPIEKFVDLDRCFVVMRFPVTNGKDLVMI 149

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----- 215
           +          S  + Y     +   Q + +   + ++       ++ GDFN  +     
Sbjct: 150 N----------SHMSAYDKGGKMRKAQMKLISSVMEKEYRRGNYVIVGGDFNHALGKDMM 199

Query: 216 ----NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID----YFVMDQNAY 267
               +                       +  +R N        +  D    Y  +     
Sbjct: 200 THFEHQEEIPSWVSVLDQKMLPKDFTMIKAQNRENVATVRATDMKYDPKVNYMTICDGF- 258

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ++ ++     YN +          DH P+ ++++
Sbjct: 259 --IVSKNVQAKAYNINTHFEYA----DHNPVRLEFE 288


>gi|226308530|ref|YP_002768490.1| hypothetical protein RER_50430 [Rhodococcus erythropolis PR4]
 gi|226187647|dbj|BAH35751.1| hypothetical membrane protein [Rhodococcus erythropolis PR4]
          Length = 323

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/290 (11%), Positives = 74/290 (25%), Gaps = 64/290 (22%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
            T++    +RL+  N+                    +D   L    +  + D+V +QE+ 
Sbjct: 94  STSANGPSIRLMQANL----------------MVGAADPESLVAMVRERNVDVVTVQELT 137

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
              A A                +++H       D      +  +      +S      + 
Sbjct: 138 YQEAEALEAAGLE--------EVLSHQFLIPYADGGGGAGIYSRFPLSNPRSLDGFSPET 189

Query: 136 SFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                     +   + +   + + +  +H             Y    S+ + + Q L  +
Sbjct: 190 ----------LSAELNVGLAQPVTLFAVHPAP---------AYISPASVWAAEQQRLGSY 230

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + +        +++GDFN   +     +            +                   
Sbjct: 231 MDEAAGMDN-VIVSGDFNASYSNKQFRNLLSNGYTSAADQL---GSGLIPTYPTDKWYPA 286

Query: 255 IP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  ID+ +    A   L +                    SDH  +  D  
Sbjct: 287 VVGIDHIITKGAAATSLERIEIE---------------GSDHHGLIADIT 321


>gi|325914870|ref|ZP_08177205.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325538961|gb|EGD10622.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 407

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/384 (10%), Positives = 83/384 (21%), Gaps = 103/384 (26%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                V  ++R+ ++N +  S++ G  + +       +    +    + +  D+V L E 
Sbjct: 28  ATGEPVPTQLRIATYNTSLYSDEAGGLVRELQGDSAHAR--KIAAVLQRVRPDLVLLNEF 85

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND------------------------- 109
                  +             +       R                              
Sbjct: 86  DFDPD-HRAADLFQQRYLQVAQPGGGEPLRYPYRYLAPVNTGVPSGLDLDNNGTVGGDGR 144

Query: 110 -------------IHTAIAVRKKNVR------------VLQQSYPLLGAKDSFSRAGNRR 144
                            + V  +                      L        R+    
Sbjct: 145 SRGNDAWGYGLHPGQYGMLVLSRYPIDAQAVRSFQLLKWSALPGALRPLDPVTGRSFYSD 204

Query: 145 AVELLVEINGKK------------IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           A+   + ++ K             +  L  H     F  + +   + +   L+    +L 
Sbjct: 205 AIWSQLRLSSKSHWDVPVHTPLGVVHALVSHPTPPVFDGAEKRNAARNHDELALWRAYLD 264

Query: 193 DWITQK------------KESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLIRFPK 239
           +    K              +   FVI GD N    +  G ++     I     L     
Sbjct: 265 NAADSKRWLCDDKGVCGGLAADARFVILGDLNNDPIDGAGRHEAIRALIHHPRVLHYPTP 324

Query: 240 EKDSR---------------------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
             +                                 + +DY +        L    F   
Sbjct: 325 RSEGGPQKTAEYAAQGIVHTGDPHQVTGDFGPQAGTMRLDYVLPSHQFT-LLGSGIFWPA 383

Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302
               +   + G   SDH  + +D 
Sbjct: 384 STAPEAAIADG---SDHHAVWVDI 404


>gi|164657069|ref|XP_001729661.1| hypothetical protein MGL_3205 [Malassezia globosa CBS 7966]
 gi|159103554|gb|EDP42447.1| hypothetical protein MGL_3205 [Malassezia globosa CBS 7966]
          Length = 317

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 35/139 (25%), Gaps = 37/139 (26%)

Query: 190 WLKDWITQKKESLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDS 233
            L++ +          ++ GD N                 + +       F   + P   
Sbjct: 6   ALEERVRSLINEGRHVIVVGDMNVVASPRDHCESARVPAAEFSAHPARQWFQAILAPQGP 65

Query: 234 LIRFPKEKDS------RCNAN----KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
           L+   +           C       +       +DY ++ Q    ++             
Sbjct: 66  LMDMTRHFFPERDRMYTCWNTLIDARASNYGTRLDYTLVTQGLEPWIQHADIQ------- 118

Query: 284 DIKSRGKRLSDHCPISIDY 302
                    SDHCPI +D 
Sbjct: 119 ----PQVHGSDHCPIYLDL 133


>gi|302867305|ref|YP_003835942.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|302570164|gb|ADL46366.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
          Length = 308

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 71/281 (25%), Gaps = 73/281 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+VS N+   +                 D         +   D++ LQE+   + VA V
Sbjct: 101 VRVVSQNLRVGNP----------------DPAATVGALTDDAPDLIGLQEVADGDRVASV 144

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +                 R  +  + + +A+  +               D        
Sbjct: 145 LAE-----------------RYPHRAVVSTVALWSRWPIREAHGVDTGLGWDR------- 180

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+  +V      + V  +HL S     +         +   Q    L D +    +   
Sbjct: 181 -ALRAVVAAPQGDLAVYVVHLGSARAGHT---------ATRDQTVAALADAVR--ADPAD 228

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V+ GD N         D   + +          +                  D+ +  
Sbjct: 229 RLVVLGDLNTATT-DRVFDPLTRLLGD-----AQAEAGQGFGFTWPAGLPVTRPDHVLYR 282

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 L   +   +   +          SDH  ++  + +
Sbjct: 283 G-----LTPTAAGVLHTPD----------SDHRAVTAGFRW 308


>gi|34392553|dbj|BAC82605.1| pol-like protein [Tetraodon nigroviridis]
          Length = 1318

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/302 (9%), Positives = 88/302 (29%), Gaps = 64/302 (21%)

Query: 1   MIRKYVLALVFFLV-PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           M+   +L L F       +   +  R+ + N+N                R      L+  
Sbjct: 1   MMDTLILVLFFIASDFNLSHNMESFRVGTLNVNG--------------ARVAEKRALVFD 46

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            A+    +++FLQE  S         +  W   +  + +++H    S       +   + 
Sbjct: 47  TARRKRVEVLFLQETYSDEH-----NQADWAKEWEGQVVLSHLSTASGG---VGLLFLRS 98

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                 +   ++  +           + +    N + +  ++++  +             
Sbjct: 99  FTPTSVEVEHVVKGR----------CLLVTACFNERTVVFINVYAPTNG----------- 137

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDF----------NRKINYLGNNDDFWKTID 229
             +      + +   + +        ++ GDF          N    + G+     + + 
Sbjct: 138 --TERKSFLEKVSARLNRCGPEDF-LIMGGDFNCTECEFVDRNHAEPHPGSQHALKQLVH 194

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNED 283
            +  +  + +   + C      R          +D F + ++ +  L   S +   + + 
Sbjct: 195 SHGLVDAWRRMH-ADCRQYTWSRLGEDRISMARLDRFYVFKHHFNALKSCSITPAGFTDH 253

Query: 284 DI 285
            +
Sbjct: 254 SL 255


>gi|212721774|ref|NP_001131212.1| hypothetical protein LOC100192520 [Zea mays]
 gi|194690890|gb|ACF79529.1| unknown [Zea mays]
 gi|194705668|gb|ACF86918.1| unknown [Zea mays]
          Length = 343

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 86/327 (26%), Gaps = 65/327 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87
           +WN+  L+  + + L      +             + D  ++  QE+   NA   + PK 
Sbjct: 17  TWNVGGLAPPDDLDLEDWLDTKND-----------SYDIYVLGFQEIVPLNARNVLGPKQ 65

Query: 88  T-----WCIFYSTERLINHSKRDSNNDIHTA-----------------IAVRKKNVRVLQ 125
                 W +                +                      +  R    R ++
Sbjct: 66  RRAAMKWQLLIGDALNSTRHGAAGMHGQGQGGAFRCLMSKQMVGIFVSVWTRSSLCRHVR 125

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        R GN+ AV +   ++G     +  HL S           + +  +LS
Sbjct: 126 HPGVCSVGAGVLGRLGNKGAVSVRFLLHGTSFCFVCCHLASGGEKGDALRRNADAAGILS 185

Query: 186 QQ-------AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---------------- 222
           +               + +K       V+ GD N +I    +                  
Sbjct: 186 RTSFLGFGGVAAAPGEVPKKILGHDRVVLLGDLNYRIAMDDDEARQLVRARKWGMLLEGD 245

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI----DYFVMDQN----AYKFLIQES 274
           +    +        + +   +     K  RN   +    D     +     A  +  +  
Sbjct: 246 ELLLELSSGRQFHGWHEGHVTFAPTYKYSRNSDHLHWCADGVAAGREKQHRAPAWCDRIL 305

Query: 275 FSEILYNEDDIKSRG-KRLSDHCPISI 300
           +      +   +  G  RLSDH P+  
Sbjct: 306 WRGKGMKQVRYERCGCYRLSDHRPVRA 332


>gi|147788673|emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]
          Length = 1936

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 50/176 (28%), Gaps = 33/176 (18%)

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D       + ++       G  +  +   +   C     E  +    ++           
Sbjct: 790 DLLGVEEGQFSISCRFRNVGDGVIWVFTGVYGPCSRKDRECLWEEFGAIRGLW------- 842

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRC 245
                    P+ + GDFN  +     + +         F + ID    +    +      
Sbjct: 843 -------EDPWCLGGDFNSTLYQAERSRNGRITSAMRRFAQVIDELGLIDIPLQGGSFTW 895

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +   N +    +D F++  N              Y+    +   + +SDH PI ++
Sbjct: 896 SGGLNNQXWARLDRFLVSPN----------WIDQYSRAIQRRLPRPISDHFPILLE 941


>gi|258542290|ref|YP_003187723.1| hypothetical protein APA01_11960 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633368|dbj|BAH99343.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256636427|dbj|BAI02396.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256639480|dbj|BAI05442.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256642536|dbj|BAI08491.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256645591|dbj|BAI11539.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256648644|dbj|BAI14585.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256651697|dbj|BAI17631.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654688|dbj|BAI20615.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 227

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 78/288 (27%), Gaps = 85/288 (29%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A   + VR++SWN+               ++RT +    +    +    D++ +QE 
Sbjct: 19  SFVACDMEGVRVISWNL---------------LRRTGATVHDIAALIEAEKPDVLLMQEA 63

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                           I    + +  H  R+        +A   +           + + 
Sbjct: 64  TVE-------------IDVLPDVIGGHYARNPQPGRIHGVACWSRIPFARAPRACTIPSG 110

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F     R A  +  E    K  + ++HL     L+              +Q + L   
Sbjct: 111 PLFK----RHAQIIEYE----KFSLANVHLSHGQMLN-------------RKQLRRLATL 149

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           ++       P  I GDFN               +     +  F                 
Sbjct: 150 LS------PPCAILGDFN---------------LLGPTLVPGFKDVGPKAPTHRMVDLLP 188

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           I ID  ++     + +   S   +              SDH PI++  
Sbjct: 189 IRIDRCLV-----EGMQCLSARVLPV----------FASDHRPIAVTL 221


>gi|332871734|ref|XP_003319093.1| PREDICTED: synaptojanin-1 isoform 3 [Pan troglodytes]
          Length = 1350

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 567 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 626

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 627 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 686

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 687 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 740

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 741 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 800

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 801 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 860

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 861 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 906


>gi|332871731|ref|XP_003319092.1| PREDICTED: synaptojanin-1 isoform 2 [Pan troglodytes]
          Length = 1295

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|332871729|ref|XP_003319091.1| PREDICTED: synaptojanin-1 isoform 1 [Pan troglodytes]
          Length = 1528

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 523 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 582

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 583 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 642

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 643 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 696

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 697 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 756

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 757 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 816

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 817 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 862


>gi|315506289|ref|YP_004085176.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|315412908|gb|ADU11025.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 308

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 74/283 (26%), Gaps = 77/283 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR+VS N+   +                 D             D++ LQE+   + VA V
Sbjct: 101 VRVVSQNLRVGNP----------------DPAATVGALTGDAPDLIGLQEVADGDRVASV 144

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +                 R  +  + + +A+  +               D        
Sbjct: 145 LAE-----------------RYPHRTVVSTVALWSRWPIREAHGVDTGLGWDR------- 180

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+  +V      + V  +HL S     +         +   Q    L D +    +   
Sbjct: 181 -ALRAVVAAPQGDLAVYVVHLGSARAGHT---------ATRDQTVAALADAVR--ADPAD 228

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR--NKIPIDYFV 261
             V+ GD N             +  DP   L+   + +  +               D+ +
Sbjct: 229 RLVVLGDLNTATTD--------RVFDPLTRLLGDAQAEAGQGFGFTWPAGLPVTRPDHVL 280

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   L   +   +   +          SDH  ++  + +
Sbjct: 281 YRG-----LTPTAAGVLHTPD----------SDHRAVTAGFRW 308


>gi|237757326|ref|NP_001153778.1| synaptojanin-1 isoform d [Homo sapiens]
          Length = 1526

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 523 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 582

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 583 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 642

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 643 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 696

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 697 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 756

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 757 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 816

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 817 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 862


>gi|237757310|ref|NP_003886.3| synaptojanin-1 isoform a [Homo sapiens]
          Length = 1612

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 567 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 626

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 627 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 686

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 687 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 740

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 741 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 800

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 801 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 860

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 861 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 906


>gi|237757308|ref|NP_982271.2| synaptojanin-1 isoform b [Homo sapiens]
          Length = 1350

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 567 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 626

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 627 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 686

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 687 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 740

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 741 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 800

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 801 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 860

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 861 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 906


>gi|223460134|gb|AAI36604.1| SYNJ1 protein [Homo sapiens]
          Length = 1264

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 523 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 582

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 583 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 642

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 643 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 696

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 697 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 756

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 757 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 816

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 817 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 862


>gi|168278755|dbj|BAG11257.1| synaptojanin-1 [synthetic construct]
          Length = 1279

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|119630268|gb|EAX09863.1| synaptojanin 1, isoform CRA_a [Homo sapiens]
          Length = 1576

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 531 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 590

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 591 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 650

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 651 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 704

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 705 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 764

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 765 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 824

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 825 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 870


>gi|114684345|ref|XP_531429.2| PREDICTED: synaptojanin-1 isoform 4 [Pan troglodytes]
          Length = 1614

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 567 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 626

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 627 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 686

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 687 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 740

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 741 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 800

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 801 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 860

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 861 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 906


>gi|215273894|sp|O43426|SYNJ1_HUMAN RecName: Full=Synaptojanin-1; AltName: Full=Synaptic
           inositol-1,4,5-trisphosphate 5-phosphatase 1
 gi|119630269|gb|EAX09864.1| synaptojanin 1, isoform CRA_b [Homo sapiens]
          Length = 1573

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|237757312|ref|NP_001153774.1| synaptojanin-1 isoform c [Homo sapiens]
          Length = 1295

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|2702321|gb|AAC51921.1| synaptojanin [Homo sapiens]
          Length = 1311

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|20521692|dbj|BAA74933.2| KIAA0910 protein [Homo sapiens]
          Length = 1315

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 564 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 623

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 624 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 683

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 684 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 737

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 738 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 797

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 798 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 857

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 858 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 903


>gi|2702323|gb|AAC51922.1| synaptojanin [Homo sapiens]
          Length = 1575

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|238784815|ref|ZP_04628816.1| hypothetical protein yberc0001_30710 [Yersinia bercovieri ATCC
           43970]
 gi|238714231|gb|EEQ06242.1| hypothetical protein yberc0001_30710 [Yersinia bercovieri ATCC
           43970]
          Length = 253

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 92/289 (31%), Gaps = 71/289 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             ++ +R++ WNI                ++     ++L+++    DA ++ LQE  +  
Sbjct: 31  PTSEFLRVMVWNIF--------------KQQRAEWLSVLKEF--GRDAQLMLLQEAQTTP 74

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +                     + ++     A+      V  L  ++P+        
Sbjct: 75  ELVRFA---------------TSHYQAADQVPAFALPQHPSGVMTLAATHPVYCCPLRER 119

Query: 139 RAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R +   LV +    +G+ + V++IH  +F     + +           Q + + + 
Sbjct: 120 EPLLRLSKSALVTVYPIHDGRLLMVVNIHAVNFSLGVDVYSK----------QLEPIGEQ 169

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I   +    P ++AGDFN          +  +    +  L       D R  A       
Sbjct: 170 IAMHRG---PVILAGDFNAW---SRQRVNALQRFAQDAGLDEVKFRTDLRSRA-----FG 218

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            P+D+                        D      R SDH P+ ++++
Sbjct: 219 RPLDFVFYRG---------------LTLADASVLVTRASDHNPLLVEFE 252


>gi|326383740|ref|ZP_08205425.1| Endonuclease/exonuclease/phosphatase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326197504|gb|EGD54693.1| Endonuclease/exonuclease/phosphatase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 312

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/283 (10%), Positives = 60/283 (21%), Gaps = 69/283 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + +VS NI   +                 D   L +  +  D D++ +QE+    A+  
Sbjct: 95  PLTVVSANIQLGTG----------------DVDDLAELVRTRDVDVLAVQEITPEAALR- 137

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                   I  ++              +    AV  ++                      
Sbjct: 138 --------IRQTSIAEDLPHDFVRPAALAYGTAVYSRHPLSQTAVLEGFALT-------- 181

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKE 200
                +       ++ V  +H       +                A+ L           
Sbjct: 182 -TLTAVATVPGHGEVQVFAVHPVPPTHPED--------------WAEELDRIGAALSSVP 226

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-IDY 259
           S    V  GDFN   +++                                    +  ID+
Sbjct: 227 STRSVVALGDFNATTDHVQFRRLLSGGYRDAGE---AAGAGWLPTYPTDKRYPPLVGIDH 283

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            V+       +     S                 DH  I  + 
Sbjct: 284 IVVRGLTATEVSSHEISGA---------------DHRAILAEI 311


>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
          Length = 1241

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 91/342 (26%), Gaps = 80/342 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY----AKNLDADIVFLQEM 74
            + + + + ++N+         SL+   V+R       +              I+ LQE+
Sbjct: 288 FLPKDITIATYNV------LTDSLFPPPVERYPLLIDAILSIHPTPPSLATPSILCLQEV 341

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                +  +   N      +   L  HS       I   +        +    +      
Sbjct: 342 TD-GFLQHLLSNN---AIRTRYPLCTHSSNSVLPSIRNCVI----FATLSCGPFEWQWLD 393

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            +    G   A    +    K + V  +HL               S S  + Q + L  +
Sbjct: 394 FTKRHKGAVIASFPKLGSPDKPLVVATVHLTCGLGDG--------SVSAKAIQLKTLSAY 445

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDF--------------------------WKTI 228
           +   K S   +++AGDFN + +    +                             W+  
Sbjct: 446 LRT-KHSASDWIVAGDFNLQTSIQSIDSALASGSISKDTHELVRKGLIDEELFSDSWEIF 504

Query: 229 DPNDSLIRFPKEKD-------------SRCNANKNL-----------RNKIPIDYFVM-- 262
             ++     P E D             +  N   N                  D  ++  
Sbjct: 505 FGSNEEDFVPYEADNTVAEIKGEGEWGATFNPFTNPVAAKIVRWNSDPRPQRYDRVLIKR 564

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
             +     +   F     N  D +   +  SDH  +S+  +F
Sbjct: 565 TGDLRVRSV-CRFGFPEINSQDSEKTLECGSDHWGVSVMLNF 605


>gi|53724878|ref|YP_104766.1| hypothetical protein BMA3294 [Burkholderia mallei ATCC 23344]
 gi|52428301|gb|AAU48894.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
          Length = 230

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 63/263 (23%), Gaps = 55/263 (20%)

Query: 57  LRQYAKNLDADIVFLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLIN 100
           +R +  +  AD+ FLQE  +                   V  ++      I  + +  I 
Sbjct: 1   MRSWVASTHADVYFLQEAMARRMPRPVLAAGFGAPMAEPVDDIWHCQATEIARALDWQIA 60

Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWV 159
                         A+   +   L   + +        R   R  +        G  + +
Sbjct: 61  LGPNVFKPSWRHGNAILSPHPLDLGGRWDISA-----HRFERRGLLVARATLAGGAPVTL 115

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
           L  HL                 +   +Q  W+  WI +   +  P V+AGDFN   N   
Sbjct: 116 LCAHLALT-------------RAARLRQMHWIAHWIERNARTG-PLVLAGDFNDWRNDSI 161

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                   +     L                    + +D   +                 
Sbjct: 162 P-------LFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRGMTPLEWRAPG----- 209

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
                       LSDH P     
Sbjct: 210 -------DETAWLSDHLPYVARL 225


>gi|332229272|ref|XP_003263816.1| PREDICTED: synaptojanin-1-like [Nomascus leucogenys]
          Length = 1396

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 349 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 408

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 409 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 468

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 469 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 522

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 523 EDFVEIARKLSFPMVRCCFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 582

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 583 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 642

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 643 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 688


>gi|254564561|ref|XP_002489391.1| Class II abasic (AP) endonuclease involved in repair of DNA damage
           [Pichia pastoris GS115]
 gi|238029187|emb|CAY67107.1| Class II abasic (AP) endonuclease involved in repair of DNA damage
           [Pichia pastoris GS115]
 gi|328349821|emb|CCA36221.1| AP endonuclease 2 [Pichia pastoris CBS 7435]
          Length = 520

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/369 (10%), Positives = 88/369 (23%), Gaps = 99/369 (26%)

Query: 13  LVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            +P     +Q  VR V++N+         +L           +  +  Y     ADI+ L
Sbjct: 4   ALPPVPVKSQAAVRFVTFNV-----NGTKTLCNYHPWNKMKSFDKIFGYLF---ADIITL 55

Query: 72  QE--MGSYNAVAKVFPKNTWCIFYS-TERLINHSKRDSNNDI---------HTAIAV--- 116
           QE  +   N   ++     +  F +       +S       I          + +AV   
Sbjct: 56  QELKVQKDNLDHELNEIPNYRSFVTLATNRKGYSGVGVFVRIPADEESDQIKSCLAVVHA 115

Query: 117 ---RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV----LDIHLKSFCF 169
                  ++  Q +       +          +   ++  G+ + +    + + +  +CF
Sbjct: 116 EEGITGYLKSSQSTTSYRDLNNIGGYPDISEVLANEIDFQGRCVVLELGNMMVIISVYCF 175

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------- 219
            +S+               + + +   + ++     VI GD N   + +           
Sbjct: 176 ANSMGTEQGEF--HRVLFLRCILERAEKLQQMGKTVVIMGDINVSRDLIDNEVYLREGIA 233

Query: 220 -------------------------------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
                                                  I    +      +     +  
Sbjct: 234 DKSLIPPINNDGAHFEEANKTAVLQFRTASQPRSLLNSFIKDKYNDSGILHDTFREHHGR 293

Query: 249 KNLRN--------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                                 ID  +          +                    SD
Sbjct: 294 VMRSYTVWNTLKNTRPLNIGSRIDLILCSTALLNKFKKCEIL-----------PWLMGSD 342

Query: 295 HCPISIDYD 303
           HCP+  D++
Sbjct: 343 HCPVIADFE 351


>gi|159039045|ref|YP_001538298.1| endonuclease/exonuclease/phosphatase [Salinispora arenicola
           CNS-205]
 gi|157917880|gb|ABV99307.1| Endonuclease/exonuclease/phosphatase [Salinispora arenicola
           CNS-205]
          Length = 236

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 81/281 (28%), Gaps = 60/281 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+VS+NI+    Q   +    +V R+T+              D++ +QE        +
Sbjct: 9   PLRVVSYNIH---SQRDDAAALVAVARSTA-------------PDVMIVQE-----GPRR 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  +       ++  L+  +            ++R +      Q +PL   +        
Sbjct: 48  LRWRQRSAALAASFGLVVAAGGLPALGNLLLTSLRVRVTGTRCQRFPLTPGRH------L 101

Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R A      +    +  V   HL             S   +    QA+    +  +   +
Sbjct: 102 RGAAYADCLVGRDARFTVAGSHL-------------STDPAERPAQAE---RFARELTGA 145

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++  D N + +           +              +             ID   
Sbjct: 146 PAPVIVGADLNEEADGPAW------AVVAAGRTDAAVAADRADRPTFPRGPLHRRIDALF 199

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +D            + + Y+  D   + +  SDH PI  D 
Sbjct: 200 VDPR---------ITVVHYDVVDTP-QTRLASDHLPILADL 230


>gi|54023631|ref|YP_117873.1| hypothetical protein nfa16630 [Nocardia farcinica IFM 10152]
 gi|54015139|dbj|BAD56509.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 329

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 73/285 (25%), Gaps = 65/285 (22%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+   ++R++  N+                     D   +    +    +++ +QE+   
Sbjct: 106 AASGPELRVLQSNLLFGGS----------------DLDAVVWEVRGRGVELLTVQELTPD 149

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A            ++  E     +         T I  R       +    LL    + 
Sbjct: 150 AAHQLTADLAADLPYHHLEPGPGGAG--------TGIFSRYPLHDTRKLDGFLLANLSAT 201

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  V +          V  +                 +    S + + L++ +  
Sbjct: 202 MDHPQRGPVTV--------FAVHPVPPPM-------------NFPAWSAEMRRLREVLDV 240

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           ++    P V+ GDFN  +++    D           L           +  +     I I
Sbjct: 241 QQG---PAVVGGDFNATMDHALFRDLLRGRFASAAELAGAGPLPTWPAD--RAWGPVIGI 295

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+ ++       +   +                  SDH  +  + 
Sbjct: 296 DHVLVADGGAGRVESITIP---------------GSDHRAVYAEL 325


>gi|283456551|ref|YP_003361115.1| endonuclease/CDSuclease/phosphatase [Bifidobacterium dentium Bd1]
 gi|283103185|gb|ADB10291.1| Endonuclease/CDSuclease/phosphatase [Bifidobacterium dentium Bd1]
          Length = 333

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 68/277 (24%), Gaps = 58/277 (20%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           RL++ N+                 +  +D   +    K+   +++ LQE           
Sbjct: 111 RLMTCNVY----------------KGRADAQEIVDLVKSEHVEVLALQETTDD--FVDAL 152

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 153 NRAGIADYLPYSQVSSSDGVYGNG---------------LWSATPLGDPADDDVDSSASF 197

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V  NG    V  + + +     S    +  S          L +    K  +   
Sbjct: 198 MPGGTVSFNGGTTPVRFVSVHTTSPTRSRWQQWRRS----------LDELARMKFNTDTR 247

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       + +        ID+ V+D 
Sbjct: 248 YIFMGDFNATYDHTPFRDFLGNRFIDASRQAAGGFVFSWPADIDYVPTFAG-IDHIVLDS 306

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                 ++    +               SDH  +   
Sbjct: 307 GMLAGQVKSEKID--------------GSDHKALLAT 329


>gi|147772257|emb|CAN60637.1| hypothetical protein VITISV_022223 [Vitis vinifera]
          Length = 1887

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 69/282 (24%), Gaps = 67/282 (23%)

Query: 29   WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT 88
            WN+                        L++   K   AD+V LQE       + +     
Sbjct: 903  WNVRG---------------AYREKRKLIKDVIKTQKADLVCLQETKLQEMTSAIVRSLG 947

Query: 89   WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                     L +             +   ++                             
Sbjct: 948  VGRCLEWGALNSRGAAXGGGFWDNRVLQLEEMEVGNYS---------------------- 985

Query: 149  LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             V    K +        S  +  S++                L +    K     P+ +A
Sbjct: 986  -VSCRFKNVEDGFCWAFSGVYGPSVKVEKEEF----------LSELGAIKGLWNEPWCVA 1034

Query: 209  GDFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            GDFN         R      +   F + I   +      +      +   N   K  ID 
Sbjct: 1035 GDFNMIRFPSXRSRGGRLSPSMRRFTEVIXELELRDLPLQGGMFTWSGGFNNLLKSRIDR 1094

Query: 260  FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            F++ ++           E  + E       + +SDH PI +D
Sbjct: 1095 FLISED----------WEAHFRECIQGVLARPVSDHSPIILD 1126


>gi|291240061|ref|XP_002739940.1| PREDICTED: angel-like [Saccoglossus kowalevskii]
          Length = 378

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 60/238 (25%), Gaps = 14/238 (5%)

Query: 27  VSWNI--NTLSEQEGV--SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+N+    L E            + +       L +  K L ADI+ LQE+       +
Sbjct: 1   MSYNVLAQRLIEMNMFLYPHCNEDILKWEYRKNNLMKEIKELQADILCLQEVQ-----EE 55

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F                  +R  +     A         +             +    +
Sbjct: 56  HFQTFYQPQLALLGYEGVFKRRTGDKHDGCATFFLTSQFELETYRLIQYYKPGVYLLNRD 115

Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
              V +L++   N      + +      F     +      ++L  +   L    T    
Sbjct: 116 NVGVIVLLKPKVNTSSHQRICVANTHLLFNPKRGDVKLAQLAVLFAEIDKLALRRTTHNG 175

Query: 201 SLV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
             V  P ++ GD N    Y          +    +       +    + +       P
Sbjct: 176 RPVYCPTLLCGDMNSIP-YSPLYRFISGMLKYTGTQTSTVSGQHRGWHGDVLPYPLWP 232


>gi|23307585|dbj|BAC16719.1| unknown protein [Oryza sativa Japonica Group]
          Length = 443

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/269 (10%), Positives = 70/269 (26%), Gaps = 45/269 (16%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQ-----EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
                 + +  + + ADI+ LQ     E    + ++++         ++      +    
Sbjct: 170 EGRRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEY---- 225

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
                    AV  +      +S  +    D          +   +E+       ++ H  
Sbjct: 226 -------GNAVLSRWPIKRWKSQRVADQSDFN-------VLRATIEVPRAG--EVNFHCT 269

Query: 166 SFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
               LD        +  L S           + +     S   +     +  +I      
Sbjct: 270 HLDHLDESWRMKQMNAILRSSDGPHILTGGLNALDGTDYSDERWADIVKYYEEIGKPTPK 329

Query: 222 DDFWKTIDPNDSLIRFPKEKD-------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
            +  K +     +       +       ++       +    +DY +   N+    +  S
Sbjct: 330 AEVMKYLKGKQYVDAKDFAGECEAVVVVAKGQVQGTCKYGTRVDYILASPNSPYKFVPGS 389

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ++ I              SDH  + +D  
Sbjct: 390 YTVISSKGT---------SDHHIVKVDVT 409


>gi|302540364|ref|ZP_07292706.1| PE-PGRS family protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302457982|gb|EFL21075.1| PE-PGRS family protein [Streptomyces himastatinicus ATCC 53653]
          Length = 290

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/315 (9%), Positives = 74/315 (23%), Gaps = 63/315 (20%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              + A  + ++ WN+             + ++     + L R         ++   E  
Sbjct: 8   PATAAASDL-VMFWNL--------YEAGIDRLEGRDERWLLQRDIVAEHRPRVLMTTEGW 58

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                   + ++    F   +                 +A+  +      ++        
Sbjct: 59  G-------WDRDGGRFFEDAKAGFGMDGALFTAKTGCHLAIFWQRDIEPVETERTPHDLA 111

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
           ++   G+       + + G    +  +      F  S  N    S  L            
Sbjct: 112 AWHGHGS-----ATLRLPGWSHELRFVVAHLDPF--SPTNRRIESDRLRRY--------- 155

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD-----------------------FWKTIDPND 232
                +  P V+A D N         D                          + +   +
Sbjct: 156 -ANPGAPAPTVMAMDANSLPPDDPEPDWTTVPRHRRDDHRWPGEKHADRAPLRRLLGEAE 214

Query: 233 SLIRFP-----KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +        +++      +   +    ID F++       L      +          
Sbjct: 215 DPLFVDAGAHARDRSPTFGHHPPGQAPRRIDVFLLSPALTGALASYQAVDDPRLLPHDGR 274

Query: 288 RGKRLSDHCPISIDY 302
            G   SDH PI++  
Sbjct: 275 PG--ASDHRPITLRL 287


>gi|121711185|ref|XP_001273208.1| SacI domain and endonuclease/exonuclease/phosphatase family protein
           [Aspergillus clavatus NRRL 1]
 gi|119401359|gb|EAW11782.1| SacI domain and endonuclease/exonuclease/phosphatase family protein
           [Aspergillus clavatus NRRL 1]
          Length = 1162

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/321 (11%), Positives = 87/321 (27%), Gaps = 55/321 (17%)

Query: 22  QKVRL--VSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG 75
           ++V++   ++N+    L     +S W         +   ++      D  I  V  QE+ 
Sbjct: 601 EQVKIWAGTFNVNGRHLDPDTDLSSWLFPAADEQKEDQAIQ------DPTIFAVGFQEIV 654

Query: 76  SYNAVAKVFPKNTWCIFYST------ERLINHSKRDSNNDIHTA--------IAVRKKNV 121
           S +    +    T    +         +    +   +   + +         I VR+  +
Sbjct: 655 SLSPQQIMSTDPTTRKVWEVAVRNCLNKHAARTGTSNYILLRSGQLVGAAIMIFVREDIL 714

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           + ++     +        +GN+    +  E +  +I  +  H  +        N      
Sbjct: 715 KEVKNVEGSVKKTGLSGISGNKGGCAIRFEYSNTRICFVTAHFAAGFANYEERNRDYE-- 772

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------------RKINYLGNNDDFW 225
                  + L+    +  +     V  GDFN                R    L  ND   
Sbjct: 773 ----TIGRGLRFQRNKSIDDHDTIVWLGDFNYRIGLGNHEVRKLATQRNYQRLYENDQLN 828

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEILYNE 282
             +   +    + +         K    +   D             +  +  +      +
Sbjct: 829 LQMMAGNVFQFYTEGAIVFPPTYKYDIGRDDFD----SSEKARIPAWCDRILWKGSNLRQ 884

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
               S   + SDH P+   + 
Sbjct: 885 LHYSSAHLQFSDHRPVWAVFS 905


>gi|119963710|ref|YP_948109.1| endonuclease/exonuclease/phosphatase family protein [Arthrobacter
           aurescens TC1]
 gi|119950569|gb|ABM09480.1| putative Endonuclease/Exonuclease/phosphatase family protein
           [Arthrobacter aurescens TC1]
          Length = 363

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/282 (9%), Positives = 72/282 (25%), Gaps = 59/282 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S N                     +D   + +  ++    ++ +QE      +   
Sbjct: 133 LKVMSLNSEY----------------GEADAAAIVKLVRDNGVQLLAIQE--HTQGLEDR 174

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                             ++    +D  +  AV            P    ++  +R    
Sbjct: 175 LEYEGLDRML-------PNRVSEPHDDASGGAVYSVFPLEPNGLLPDTPFRNDVTR---- 223

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V +    +G K  +   ++ +   +D   + +      +++QA            S  
Sbjct: 224 --VLVSNPGSGSKATLNLTNVHALPPVDERIDQWRSDLVKIARQA-----------SSPG 270

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDSRCNANKNLRNKI-PIDYF 260
             ++ GD+N   ++                +        + S     +        ID+ 
Sbjct: 271 NHLLMGDYNSTYDHSEFRALLADGPQGTKLVDVGTASGARFSPTWPMEGPPLPGIVIDHM 330

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           V        +    ++                SDH  I    
Sbjct: 331 VTSP----RISSSGYAVHRVP----------GSDHAAIMATL 358


>gi|84503000|ref|ZP_01001102.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola
           batsensis HTCC2597]
 gi|84388745|gb|EAQ01616.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola
           batsensis HTCC2597]
          Length = 239

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 71/276 (25%), Gaps = 53/276 (19%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81
            + + +WN+      +              D     +  ++  A+I  LQE+        
Sbjct: 5   SLTIATWNLQKCVGMD-----------FRRDPGRSLEVLRDTGAEIAVLQEVDKRLPPRP 53

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
              P+        T           ++      A+  +      +       +       
Sbjct: 54  AALPREMAEAAGWTVLPFGRLGPGGSSVGWHGNAMLVRPGIEADR-----IDRVHLPGLE 108

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R A+E  +      + ++ +HL                      Q   +   + +    
Sbjct: 109 PRGAIEAELATAIGPLRIIGVHLGLRRRD-------------RLGQLHAVATHLER--RP 153

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
            +P ++AGD N               +D  D L   P        +   LR    +D F 
Sbjct: 154 RMPTLLAGDINEWGRIA----VLDHVLDGLDFLDSPP--------SYPALRPVGALDRFA 201

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           + ++             L          +  SDH P
Sbjct: 202 LSRDLRAL---HPPRVHLAQ------PARIASDHLP 228


>gi|326445205|ref|ZP_08219939.1| endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 319

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 73/292 (25%), Gaps = 49/292 (16%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA------VAK 82
           WNI      +G +             T          A +V   E+           +  
Sbjct: 39  WNIAGDKIHDGATGNGV--------ITQAADSIVRRGAGLVAFNEVCENQYQALVGELRG 90

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
               +    F            +   D     AV  K    + +   L            
Sbjct: 91  RGWPDDPQNFSRFAPSRTAGNAEICQDKAYGNAVFSKAPLGIAERVELPHIAG----PER 146

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +   V ++G        HL +    +   N           Q ++++D +     + 
Sbjct: 147 RNLLCAPV-LDGGSTRFCTTHLTTSDPGEVNPNQTE--------QLRFVRDRLESYHRAG 197

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDP------NDSLIRFPKEKDSRCNANKNLRN--- 253
              +IAGDFN + +    +  +    DP      +    R   + D+ C           
Sbjct: 198 ETALIAGDFNVQPDDPRLDSYYSAGADPTNNPGTHTGAYRELDDSDTNCPGYGEWTFDKE 257

Query: 254 ---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                    K  +D   + ++         +S          +     SDH 
Sbjct: 258 QRLAPCGTKKWKLDLVFVRESDL----AGPYSADALGIPTGCTGAGACSDHR 305


>gi|299747448|ref|XP_001837042.2| phosphatidylinositol phosphate phosphatase [Coprinopsis cinerea
            okayama7#130]
 gi|298407523|gb|EAU84659.2| phosphatidylinositol phosphate phosphatase [Coprinopsis cinerea
            okayama7#130]
          Length = 1270

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/325 (12%), Positives = 84/325 (25%), Gaps = 66/325 (20%)

Query: 16   CTASVAQKVRLVSWNIN----------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
             + +      + +WN+N           L   +  +     V        L  Q     D
Sbjct: 828  YSTTKQCTFFIGTWNVNGRHPSESLNDWLFPPQSSTEPDMYVLGFQEIVPLTAQQILQTD 887

Query: 66   ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
             +   + E      + +   K    +   +E+L+  +           I V+ +   V++
Sbjct: 888  PEKRLIWEKKILETLDRRPNKTCNYVLLRSEQLVGSALI---------ILVKSELTAVIR 938

Query: 126  QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                          +GN+ AV + +E +      L  HL +  F     N    + +   
Sbjct: 939  NVEATTRKTGLRGMSGNKGAVGIRLEYHDTNFCFLTGHLAAGHFNTEERNADYRTINENL 998

Query: 186  QQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-------GNNDDFWKTIDPNDSLIRFP 238
               +       +  +S    +   D N +I            NDDF   +  +  +    
Sbjct: 999  HFLK------GKTIQSHDNVIWLADTNYRIELDNYTVRTLAENDDFDALLAADQLMHAMD 1052

Query: 239  KEK--------DSRCNANKNLRN---------KIPI----DYFVMDQNAYKFLIQESFSE 277
              +                             K+ I    D  +   N     +      
Sbjct: 1053 TGQAFVGYEEGPILFRPTYRYDFGTDNYDTSEKMRIPAWTDRILYRGNQLDLAV------ 1106

Query: 278  ILYNEDDIKSRGKRLSDHCPISIDY 302
                         + SDH P+   +
Sbjct: 1107 -------YNRAELKGSDHKPVFAIF 1124


>gi|149011294|ref|ZP_01832541.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP19-BS75]
 gi|147764284|gb|EDK71215.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP19-BS75]
          Length = 278

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 62/228 (27%), Gaps = 20/228 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWNI++L+        +  +         + Q     +ADI+ +QE          
Sbjct: 22  MKLISWNIDSLNAALTSDSARAKLS------QEVLQTLVAENADIIAIQETKLSAKGPTK 75

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +        S ++     +       K       S+P +GA  S      R
Sbjct: 76  KHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAP-STMDLEGR 134

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 + +     +V  ++  +               +  ++    L        +   
Sbjct: 135 I-----ITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDTKYAEYLAEL--------DKEK 181

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           P +  GD+N   N +   +       P  +        +         
Sbjct: 182 PVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTRH 229


>gi|37676266|ref|NP_936662.1| hypothetical protein VVA0606 [Vibrio vulnificus YJ016]
 gi|37200807|dbj|BAC96632.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
           YJ016]
          Length = 308

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/252 (11%), Positives = 60/252 (23%), Gaps = 46/252 (18%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L  Y   +  D+V LQE+ + +        + +   +  +  +            
Sbjct: 101 QHVDQLIDYLSRVQPDLVLLQEVTAPHLEQLKVLDDIYRYRFGGQPKVGLPSHQ------ 154

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
               +  +           L   D F   G +  +  + +++ +    L           
Sbjct: 155 ---LIFSRQP---------LYGMDVFYIEGYQNLIRGIWQVDEEHPVFLLTAHPPSPRNK 202

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
            +    +     L  QA                 +I GD N   +        + T+   
Sbjct: 203 EMWLRRNALIQALEYQATQ---------SPTKDILIMGDMNLSASSER-----FDTLFSG 248

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                     +       +      ID+  +D +      +     I             
Sbjct: 249 MQTAPIASWPNLPTLTLPSWLQIS-IDHLWLDSDFAICKRESIDEVI------------- 294

Query: 292 LSDHCPISIDYD 303
            SDH  I    +
Sbjct: 295 GSDHRAIMTYLN 306


>gi|291300202|ref|YP_003511480.1| hypothetical protein Snas_2711 [Stackebrandtia nassauensis DSM
           44728]
 gi|290569422|gb|ADD42387.1| hypothetical protein Snas_2711 [Stackebrandtia nassauensis DSM
           44728]
          Length = 345

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 90/322 (27%), Gaps = 51/322 (15%)

Query: 6   VLALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           VL ++  +V    + A       +   + NI  L             +    D+  L  Y
Sbjct: 17  VLMMLGTVVVADTAAANNRAAPTITAYTNNIENLLT---------KKETCEGDWDELIYY 67

Query: 61  AKNLD-ADIVFLQEMGSYNAVAKVFPKN------TWCIFYSTERLINHSKRDSNN-DIHT 112
                  D+  LQ++     V +   +        +    +        +          
Sbjct: 68  IAENSTPDLFLLQQVSDMKQVNRFIEELEEHSDGNYSGLIADTEPNGGGRCGPEKARQLN 127

Query: 113 AIAVRKKNVRVLQ---------QSYPLLGAKDSFSRAGNRRA-VELLVEI-NGKKIWVLD 161
           AI     ++  ++         +  P  G         +R   V+   +  NG+ I    
Sbjct: 128 AIVWNTDSLTYVKGTRAMWQSMRENPDSGGSQCVKNDQSRTVNVKANFKHRNGQVITAAS 187

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF-VIAGDFN-RKINYLG 219
           IH  +    +      S         A+ L D + +         ++ GD N R +N   
Sbjct: 188 IHWPTHASGNFKCADNS---------ARELDDELKESPYKKAALQIVGGDMNYRDVNSSN 238

Query: 220 NNDDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273
           +   ++K +  ND               +     +     K  IDY    +         
Sbjct: 239 DWSKWYKEMRANDFADPVRGLCGPTGGCNDGLWTHITDGVKRRIDYLFARRGTSNPAASF 298

Query: 274 SFSEILYNE-DDIKSRGKRLSD 294
             S + ++   D + R    SD
Sbjct: 299 GASNVTFSSAQDAEERDHDESD 320


>gi|242381487|emb|CAY39203.1| hypothetical protein [Streptomyces clavuligerus]
          Length = 237

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 62/272 (22%), Gaps = 54/272 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           VR++S+N+ +L                  D   L +  +    D+V +QE          
Sbjct: 19  VRVLSYNVRSL----------------RDDEDALIRVVRAAAPDLVLVQEAP-------- 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                W    +                 T  + +      V +    LL       R   
Sbjct: 55  -RFLGWRKHAARLAAGAGLVVLGGGAGATGSLLLCSLRAAVERTEDVLLPRTPGLHR--- 110

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R     +V     ++ V+  HL             S        QA  + + +T      
Sbjct: 111 RGLATAVVRFGAARLGVVGFHL-------------SLQARERHTQAGLVLERLTALGAPH 157

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
              + AGD N             +                   +   +   +  ID    
Sbjct: 158 T--LAAGDVNEPPPGRAFRRLAGRL------QDCRALAPRGGEHTFPSTAPRRRIDAVFA 209

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                                D+    +  SD
Sbjct: 210 SAEVEVLGCGVPLDLPGVTAADL----RAASD 237


>gi|115384338|ref|XP_001208716.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114196408|gb|EAU38108.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 323

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/319 (13%), Positives = 91/319 (28%), Gaps = 63/319 (19%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             + S  + +RL +WNI+               +RT +    L Q       +++FLQEM
Sbjct: 36  AASTSPLRNLRLTTWNIDF--------QVPCKNERTAAALRYLSQRPPAPYPEVIFLQEM 87

Query: 75  GSYNA----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
            + +            N +   +ST+  +            T   V K+         P 
Sbjct: 88  VASDLELIKATPWVQDNFYITDFSTQHWLGSYG--------TTTLVDKRLPVERVFRVPY 139

Query: 131 LGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
             ++        R A+ + + +N    + + + HL+S   +                Q +
Sbjct: 140 AASR------MQRDALFVDIALNPNAPLRLCNTHLESLVSVP----------PRRPVQLR 183

Query: 190 WLKDWITQKKESLVPF-------VIAGDFNR-------KINYLGNNDDFWKTIDPNDSLI 235
              D++    +            ++AGD N               +D F      + +  
Sbjct: 184 RAADFMHGTADGGEVSLPTPHGAILAGDLNAFAPEDAVAPRDCNLHDAFLVLGGRDGTEE 243

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES-----FSEILYNEDDIKSRGK 290
            F   +       +       +D  +         +Q               D  +    
Sbjct: 244 SFTWGQQIPDWMREKFG-CSRMDKVLFCGGLRVTALQRIGAGEKIWVEYPKGDSNEESDG 302

Query: 291 ------RLSDHCPISIDYD 303
                  ++DH  +  +++
Sbjct: 303 EKGEEMWVTDHLGLQAEFE 321


>gi|265998486|ref|ZP_06111043.1| LOW QUALITY PROTEIN: endonuclease/Exonuclease/phosphatase [Brucella
           ceti M490/95/1]
 gi|262553110|gb|EEZ08944.1| LOW QUALITY PROTEIN: endonuclease/Exonuclease/phosphatase [Brucella
           ceti M490/95/1]
          Length = 182

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 46/160 (28%), Gaps = 25/160 (15%)

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           +   R   R  + + + I G+ + +   HLKS     + ++  + S  +   +A+ ++  
Sbjct: 9   EPHDRIFKRDCLNVDLRIGGEPLSLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRI 68

Query: 195 ITQKKE----SLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDSL 234
           I +K      +   ++I GDFN                     +         +    ++
Sbjct: 69  IEEKFGIDRVTERRWLICGDFNDYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAV 128

Query: 235 IRFPKEKDSRCNA-NKNLRNKIP----IDYFVMDQNAYKF 269
               +                      +DY +        
Sbjct: 129 NLVERRPVMDRWTLYHTRGPLERHLCQLDYIMASPAFAAK 168


>gi|126659189|ref|ZP_01730327.1| Phytase [Cyanothece sp. CCY0110]
 gi|126619494|gb|EAZ90225.1| Phytase [Cyanothece sp. CCY0110]
          Length = 2066

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/376 (11%), Positives = 94/376 (25%), Gaps = 97/376 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-------- 75
           +R  ++N  +L+      L  + +         + +  + ++ D++ + E          
Sbjct: 2   IRFATFN-ASLNRNSEGELIADLLTPNNEQGQTVAEIIQRVNPDVILINEFDFDSVGGAA 60

Query: 76  ---SYNAV---AKVFPKNTWCIFYSTER------------------------LINHSKRD 105
              + N +    K      +  FY                              N +   
Sbjct: 61  QLFNNNYLNVSQKGVNPIDYPYFYVAPSNTGIASEFDLDNNGEVITNPGELGYGNDAFGF 120

Query: 106 SNNDIHTAIAVRKKNVR------------------------VLQQSYPLLGAKDSFSRAG 141
            N      +AV  K                            +         + +  R  
Sbjct: 121 GNFPGQFGMAVYSKYPIDFSNVRTFQTFLWKDMPNALLPVDPVSGESYYSEEELNNFRLS 180

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK----DWITQ 197
           ++   +L + ING+ +  L  H     F    +     +   +   A ++      +I  
Sbjct: 181 SKSHWDLPLLINGETVHFLVSHPTPPVFDGEEDRNGRRNHDEIRFWADYITPGEGSYIYD 240

Query: 198 KKES------LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-------------- 237
              +         FVIAGD N       + ++    +  N  +                 
Sbjct: 241 DLGNFGGLKVGEKFVIAGDQNADPFDGDSVNNAINQLLDNPYINTSVTPESEGGVDASNR 300

Query: 238 ------PKEKDSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQE-SFSEILYNEDDIKS 287
                   + D + +      N      +DY +  QN           +      D +  
Sbjct: 301 QGGINNNHQGDPKFDTADFNDNSSGNLRVDYVLPSQNLEIAETGIFWPTSDNALFDLVGD 360

Query: 288 RGKRLSDHCPISIDYD 303
                SDH  +  D +
Sbjct: 361 FPFPSSDHRLVYADVN 376


>gi|262183784|ref|ZP_06043205.1| putative exodeoxyribonuclease [Corynebacterium aurimucosum ATCC
           700975]
          Length = 299

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/313 (10%), Positives = 72/313 (23%), Gaps = 49/313 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA 81
              + S N+N +             +R  ++   +  + +   AD+V +QE+  +     
Sbjct: 2   SFTIASVNVNGIRA--------ACKQRNENN-PGMNAWLETTPADVVLMQEVRANPEQTQ 52

Query: 82  KVFP---KNTWCIFYSTERLINHSKRDS-------------NNDIHTAIAVRKKNVRVLQ 125
           K      +  W +  +       +                  +   +   +      V  
Sbjct: 53  KALAPALEAGWNLVQAESAAKGRAGVGILSKHALGDVSVGFGSFAESGRFIAATVEGVRV 112

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKI-------WVLDIHLKSFCFLDSLENTYS 178
            S  L        +   +            ++        +           D   N  +
Sbjct: 113 ASLYLPSGDTDSPKQDEKYLFLDEFSEVLDEMAATYPEAVIGGDWNICHRAQDLKNNKAN 172

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
              S    + +   D +        P    G  N            W+            
Sbjct: 173 EKKSGHLPEERAFMDRVFGSFPDEQPQDKKGLGNWLGVVDYETKTAWEAAADPQWFDVAR 232

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           +              +           IDY    +   +   +    +    E+      
Sbjct: 233 RLHPEADGPYTWWTYRGQAFNNDAGWRIDYQAATKAMLERAQRTWVEKAPTVEE------ 286

Query: 290 KRLSDHCPISIDY 302
            R SDH P+ ++Y
Sbjct: 287 -RWSDHSPLLVEY 298


>gi|152994652|ref|YP_001339487.1| exodeoxyribonuclease III Xth [Marinomonas sp. MWYL1]
 gi|150835576|gb|ABR69552.1| exodeoxyribonuclease III Xth [Marinomonas sp. MWYL1]
          Length = 258

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/306 (9%), Positives = 80/306 (26%), Gaps = 76/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81
           ++++S N+N + +      +               ++    D D+V LQ++ +       
Sbjct: 1   MKVISLNVNGIRQAAERGFF---------------EWMVRQDPDVVCLQDIQADERTLND 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            VF    +  ++                    +A+  K +     +       D   R  
Sbjct: 46  SVFFPPGYNTYFFDSMENPEQA---------GVAIYCKTMPKAIMTGMGFPECDFEGRF- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   ++ +  K+ +           +     +        +  +  K+ + + +  
Sbjct: 96  --------IQADFDKVSIGAFLTPHGSNHEEALQEHK------YRFMEGFKNHLIKTRRK 141

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              F+  G  N   +                         +  +  + +  F +      
Sbjct: 142 RREFIFCGTANVARSPIDVSSWFVNQRNSGFLPEERKWINEIFNELEYIDAFRQVNKQDK 201

Query: 246 NANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              +DY +        +   +             +G+R SDH P
Sbjct: 202 QYTWWPDYERAWKLDEGGRLDYQITTPGIKNLIQGGTI-----------YKGQRFSDHAP 250

Query: 298 ISIDYD 303
           + ++Y+
Sbjct: 251 LIMEYN 256


>gi|269123233|ref|YP_003305810.1| hypothetical protein Smon_0452 [Streptobacillus moniliformis DSM
           12112]
 gi|268314559|gb|ACZ00933.1| hypothetical protein Smon_0452 [Streptobacillus moniliformis DSM
           12112]
          Length = 338

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 85/302 (28%), Gaps = 58/302 (19%)

Query: 7   LALVFFLVPCT----ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           + L+ F V  T          +++V WN+                     +   + +   
Sbjct: 89  VILIVFGVNPTKNIDTHEGNTIKIVEWNVEN-----------------ELESKSIYKIFG 131

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
             DADIV   E+  Y    K  P N           I++ K +    I T+  +    + 
Sbjct: 132 EFDADIVVFPELEGY---YKGDPANNRLKELFKSINIDYDKYEVFTSIPTSGNIAPVTIV 188

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           + +     +    S                      +    +          +T  P   
Sbjct: 189 IKKSFSKYIDTNQSLMTQFG---------------TIYLKSIDKDMPDIIGLHTAPPLLG 233

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           L+S   + L    +   ES    +I GDFN  +           +I  ++ ++ +     
Sbjct: 234 LMSNWNRDLNVISSNIVESNPKAIILGDFNATL-----RHGALNSITTHEDVLDYLSRFR 288

Query: 243 SRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                +         ID+ ++ ++              Y    +     R SDH  I ++
Sbjct: 289 RGTWHSNFPIWMSTSIDHILIPKD-------------TYRVKKVDVLKLRESDHRAIFVE 335

Query: 302 YD 303
             
Sbjct: 336 IS 337


>gi|310819550|ref|YP_003951908.1| hypothetical protein STAUR_2277 [Stigmatella aurantiaca DW4/3-1]
 gi|309392622|gb|ADO70081.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 241

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 61/253 (24%), Gaps = 60/253 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ S N+                   T     L    +  + D+V LQEM       +
Sbjct: 18  TLRVASLNVWN------------PGPDKTQRNQGLATALRERNLDVVLLQEMDGTAGQFE 65

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F +                          AI  R +         P   +     +  N
Sbjct: 66  LFRQ-------------VSGLPYGVRSGDVAILSRFELKDFEAPDLPRKPSLTPIRQLLN 112

Query: 143 RRAVE---LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           RR V       E +G +  V   H  +   ++      + +                   
Sbjct: 113 RRDVYFCLAAFEHHGTRFHVSSHHWDNRQLVNRKTAAAATAAR-------------MSHV 159

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
            +    +  GDFN   +         + +  + +                       ID+
Sbjct: 160 PASTVILCGGDFNTHQDTAELQRVMAEGLLNSGA-------------------PGDFIDF 200

Query: 260 FVMDQNAYKFLIQ 272
            +      + L Q
Sbjct: 201 ILYRGPGVQVLKQ 213


>gi|320158396|ref|YP_004190774.1| hypothetical protein VVM_01150 [Vibrio vulnificus MO6-24/O]
 gi|319933708|gb|ADV88571.1| hypothetical protein VVMO6_03549 [Vibrio vulnificus MO6-24/O]
          Length = 308

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/252 (11%), Positives = 60/252 (23%), Gaps = 46/252 (18%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L  Y   +  D+V LQE+ + +        + +   +  +  +            
Sbjct: 101 QHVDQLIDYLSRVQPDLVLLQEVTAPHLEQLKVLDDVYRYRFGGQPKVGLPSHQ------ 154

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
               +  +           L   D F   G +  +  + +++ +    L           
Sbjct: 155 ---LIFSRQP---------LYGMDVFYIEGYQNLIRGIWQVDEEHPVFLLTAHPPSPRNK 202

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
            +    +     L  QA                 +I GD N   N        + T+   
Sbjct: 203 EMWLRRNALIQALEYQATQ---------SPTKDILIMGDMNLSANSER-----FDTLFSG 248

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                     +       +      ID+  ++ +      +     I             
Sbjct: 249 MQTAPIASWPNLPTLTLPSWLQIS-IDHLWLNSDFAICKRESIDEVI------------- 294

Query: 292 LSDHCPISIDYD 303
            SDH  I    +
Sbjct: 295 GSDHRAIMTYLN 306


>gi|227505350|ref|ZP_03935399.1| possible exodeoxyribonuclease III [Corynebacterium striatum ATCC
           6940]
 gi|227198052|gb|EEI78100.1| possible exodeoxyribonuclease III [Corynebacterium striatum ATCC
           6940]
          Length = 307

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/335 (11%), Positives = 73/335 (21%), Gaps = 85/335 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA 81
              + S N+N +          N              + +   AD+V +QE+  +     
Sbjct: 2   TFTIASVNVNGIRAACKQRNENNPGMNV---------WLEETTADVVLMQEVRANPKETQ 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K         ++  +       R         I  R     V         +        
Sbjct: 53  KALAPALEAGWHLVQAESAAKGRA-----GVGILSRTPLSDVSVGFGSFSESGRF----- 102

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +   V+  G  + V  ++L S       ++         S+    L     Q    
Sbjct: 103 ----IAATVDAEGGPVRVASLYLPSGDTDSPKQDEKYLFLDEFSEVLADLAATYPQAVIG 158

Query: 202 LVPFVI-------------------------------------------AGDFNRKINYL 218
               +                                             GD+   I+Y 
Sbjct: 159 GDWNICHRAQDLKNNKSNEKKSGHLPEERAFMDHVFGSFPDELPQDKKGLGDYLGVIDYA 218

Query: 219 GNNDDFWKTIDPND--SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAY 267
            N D   +    +         +              +           IDY    +   
Sbjct: 219 TNTDWSARVPGEDAVQWYDVARRLAPDADGPYTWWTYRGQAFNNDAGWRIDYQAATKAML 278

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +   +    +    E       +R SDH P+ + Y
Sbjct: 279 ERAEKTWVEKAPTVE-------QRWSDHSPLLVQY 306


>gi|171742357|ref|ZP_02918164.1| hypothetical protein BIFDEN_01468 [Bifidobacterium dentium ATCC
           27678]
 gi|171277971|gb|EDT45632.1| hypothetical protein BIFDEN_01468 [Bifidobacterium dentium ATCC
           27678]
          Length = 326

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 68/277 (24%), Gaps = 58/277 (20%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           RL++ N+                 +  +D   +    K+   +++ LQE           
Sbjct: 104 RLMTCNVY----------------KGRADAQEIVDLVKSEHVEVLALQETTDD--FVDAL 145

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            +     +    ++ +      N                L  + PL    D    +    
Sbjct: 146 NRAGIADYLPYSQVSSSDGVYGNG---------------LWSATPLGDPADDDVDSSASF 190

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                V  NG    V  + + +     S    +  S          L +    K  +   
Sbjct: 191 MPGGTVSFNGGTTPVRFVSVHTTSPTRSRWQQWRRS----------LDELARMKFNTDTR 240

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
           ++  GDFN   ++    D                       + +        ID+ V+D 
Sbjct: 241 YIFMGDFNATYDHTPFRDFLGNRFIDASRQAAGGFVFSWPADIDYVPTFAG-IDHIVLDS 299

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                 ++    +               SDH  +   
Sbjct: 300 GMLAGQVKSEKID--------------GSDHKALLAT 322


>gi|296199522|ref|XP_002806783.1| PREDICTED: LOW QUALITY PROTEIN: synaptojanin-2-like [Callithrix
           jacchus]
          Length = 1496

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 95/339 (28%), Gaps = 66/339 (19%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQE 73
           +++R+   +WN+N   +     L    +     D   L   A++ D    ADI  V  +E
Sbjct: 528 KRIRIAMGTWNVNGGKQFRSNLLGTAELTDWLLDAPRLSGAAESQDDSSPADIFAVGFEE 587

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
           M   +A   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 588 MVELSAGNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIR 647

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        +AGN+ AV +  + +      +  HL +       ++          
Sbjct: 648 DVAIDTVKTGMRGKAGNKGAVGIRFQFHSTSFCFICSHLTAG------QSQVKERNEDYK 701

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR--- 236
           +  Q L   + +   S       GDFN +I+              WK +   D L     
Sbjct: 702 EITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKS 761

Query: 237 ----FPKEKDSRCNANKNLRN---------------KIPIDYF-VMDQNAYKFLIQESFS 276
               F   ++   N     +                    D      +           +
Sbjct: 762 SGKIFKDFQEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGELN 821

Query: 277 EILYNED---------------DIKSRGKRLSDHCPISI 300
            +  + D                      + SDH P+  
Sbjct: 822 LLERDLDVDTKVRHTWSPGVLQYYGRAELQASDHRPVLA 860


>gi|47226216|emb|CAG08363.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1132

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 78/314 (24%), Gaps = 67/314 (21%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-SYNAVAKVF 84
           +WN+N  S    +  W                       DI  +  QE+  S  A   + 
Sbjct: 459 TWNVNGQSPDSSLEPWLCCDP---------------EPPDIYALGFQELDLSTEAFFYMD 503

Query: 85  PKNTWCIFYSTER--LINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDSFS 138
                    + ER        +             + VRK  V+ +++            
Sbjct: 504 SSKEQLWVEAVERSLHPKAKYKRVRIIRLVGMMLVVFVRKSLVKHIKEVAAEHVGTGIMG 563

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           + GN+  V +    +     +++ HL +        N               L +     
Sbjct: 564 KMGNKGGVAVRFVFHNTSFCIVNSHLAAHVEDFERRNQDYKDICARMTF--HLLEHPPLG 621

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------DFWKTIDPNDSLIRFPKEKDSR 244
                  V  GD N ++      D              +F +      +   F    +  
Sbjct: 622 IVKHDVVVWLGDLNYRLFMYDAGDVKQLIAKRELKKLQEFDQLNHQRQTNKAFSDFMEGE 681

Query: 245 CNANKNLRN---------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            N     +                    D  +   N  K L   S  ++           
Sbjct: 682 INFIPTYKYDPKTDRWDSSGKCRVPAWCDRILWRGNNVKQLKYRSHMDL----------- 730

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+S  ++
Sbjct: 731 -QTSDHKPVSALFE 743


>gi|330901521|gb|EGH32940.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 138

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 41/159 (25%)

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+ +        + V+ +HL                    ++Q  ++++ I        
Sbjct: 1   GAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQLAYIRELIGGY----R 43

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
             V+ GD N   N L  +            +               + R +  +D+ ++ 
Sbjct: 44  HQVLMGDMNTHANDLLEHSPLRDLGLLAPQIEA----------TFPSWRPQRCLDHILLS 93

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +Q     I              SDH P++++ 
Sbjct: 94  PTLTLERVQVLAQPI--------------SDHLPVAVEI 118


>gi|323455298|gb|EGB11167.1| hypothetical protein AURANDRAFT_61968 [Aureococcus anophagefferens]
          Length = 831

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 71/313 (22%), Gaps = 53/313 (16%)

Query: 40  VSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEM------GSYNAVAKVFPKNTWCI 91
            +   + V    +    L    + + A  D++ LQE+            A +        
Sbjct: 377 FAWVPDDVLAWPARRDALAAQVRRVAATADVLCLQEVEFEGCGDDRAPPAWLVDALGAGW 436

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
             +     +  +    N+     A        + + + +    +  +    +R +  + +
Sbjct: 437 TVTPPPPRDLERHAQRNERVLGRATAVAACVCVGRGWRVAWTGEGNA---TQRVLVGVAK 493

Query: 152 INGKKIWVLDIHLKSFCFL----------DSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            +G ++ V   HL +              D+  +      +L    A  L   +      
Sbjct: 494 GDGAEVAVASAHLDAGSEEKRVGMVLGIMDAARSKLGGGRNLRLVIAGDLNAELDAGSAL 553

Query: 202 LVPFVIA-------------------------GDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                                           GD       L               L R
Sbjct: 554 GAMVGDESADGAARAAARRSACAVALRREPSDGDLGAWAELLDKARTRTAAALRGGLLQR 613

Query: 237 FP-------KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            P        + ++             +D+ +            S      +        
Sbjct: 614 VPLGPTRAGHDHEAPDFPASPRMATWKLDHVLCTPALRPAARWASLEADAPSRAAGLPNA 673

Query: 290 KRLSDHCPISIDY 302
              SDH P++   
Sbjct: 674 SWPSDHYPVAAAL 686


>gi|149179298|ref|ZP_01857860.1| hypothetical protein PM8797T_00517 [Planctomyces maris DSM 8797]
 gi|148841872|gb|EDL56273.1| hypothetical protein PM8797T_00517 [Planctomyces maris DSM 8797]
          Length = 344

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 68/280 (24%), Gaps = 69/280 (24%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           R++ WNI       G  LW                  ++LD D++ L E G+ +A  K F
Sbjct: 128 RVLFWNI-------GDRLWG---------LEHAINEMRHLDPDLIGLVEAGADSAEMKQF 171

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                                    +        +       +  L              
Sbjct: 172 -------------WKQTCPDHPYQVVQNGFVFLSRLPIEDTSAGRLADMG---------- 208

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
              L   +      V    +        +  +   +   L+ QA  L            P
Sbjct: 209 -QYLKFSLQSDHPDVRAPAVFLVDIYSKVLKSRKAALEELADQASQLNQ---------QP 258

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
            ++ GDFN       + D   K             E                +D      
Sbjct: 259 VLVLGDFN-TPGDSVHFDPLRKNFKN-------SLEIAGDGYLATWPLPVPVLD------ 304

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 +   ++         ++R   +SDH P+ I+  F
Sbjct: 305 ------LDGIWTNEFIELYHAENRWTWVSDHRPVCIEMSF 338


>gi|169795897|ref|YP_001713690.1| hypothetical protein ABAYE1809 [Acinetobacter baumannii AYE]
 gi|213157406|ref|YP_002319451.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii
           AB0057]
 gi|215483385|ref|YP_002325598.1| Endonuclease/Exonuclease/phosphatase family protein [Acinetobacter
           baumannii AB307-0294]
 gi|332854431|ref|ZP_08435363.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013150]
 gi|332868461|ref|ZP_08438174.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013113]
 gi|169148824|emb|CAM86693.1| hypothetical protein; putative Endonuclease/Exonuclease/phosphatase
           domain [Acinetobacter baumannii AYE]
 gi|213056566|gb|ACJ41468.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii
           AB0057]
 gi|213988687|gb|ACJ58986.1| Endonuclease/Exonuclease/phosphatase family protein [Acinetobacter
           baumannii AB307-0294]
 gi|332728007|gb|EGJ59399.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013150]
 gi|332733386|gb|EGJ64572.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013113]
          Length = 295

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 81/305 (26%), Gaps = 42/305 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK---NLDADIVFLQEMGSYNA 79
           ++ +V WN           +     K +      +    +     D + + L E+G  + 
Sbjct: 5   ELSVVWWN-----TSLSPPISSKRDKSSDEKRAAIASVIQKFMENDYEFICLGEVGPEDI 59

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
               F K  +                      T I  +K +  +   +  +     + + 
Sbjct: 60  --DFFEKTIFPQTLGYFCAKGIDGVG-RTFFDTCIYYKKYHYLIRNGNSDVQNFTMTSAT 116

Query: 140 AGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              +   +    + N +KI +   H  S     SL+         +   A+ L+  I  +
Sbjct: 117 RTFKYGQKYKFSLLNEEKITIYLSHWPSKLNDVSLQ---------IVSIAERLRVNIEDE 167

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--------------NDSLIRFPKEKDSR 244
                  ++ GD+N +            + +                  L+   + K   
Sbjct: 168 LNETKNIILVGDYNVEPYDPAVVHQLQSSREKTIVSKKPNVFYNPCWKFLVPSFQLKSLN 227

Query: 245 CNANKNLRN-----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--LSDHCP 297
            +      N        ID  +   N            I           ++  LSDH P
Sbjct: 228 THGTYYYANGQFHHWHVIDQIMFSSNFLSDEWDLQDKYINIVNLTNLDNTQKSLLSDHHP 287

Query: 298 ISIDY 302
           +S   
Sbjct: 288 LSAVI 292


>gi|122934884|gb|ABM68185.1| APEX1 [Lagothrix lagotricha]
          Length = 156

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/170 (11%), Positives = 39/170 (22%), Gaps = 44/170 (25%)

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
              ++  ++ +                   +  + L         S  P V+ GD N   
Sbjct: 2   SFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA--------SRKPLVLCGDLNVAH 53

Query: 216 NYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRN------ 253
             +   +                 F + +        F     +   A            
Sbjct: 54  EEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARS 113

Query: 254 ---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 +DYF++  +    L                      SDHCPI++
Sbjct: 114 KNVGWRLDYFLLSHSLLPALCDSKIRSKAL-----------GSDHCPITL 152


>gi|109129024|ref|XP_001091683.1| PREDICTED: sphingomyelin phosphodiesterase 3 [Macaca mulatta]
          Length = 730

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 56/198 (28%), Gaps = 21/198 (10%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +    +        +       S   +++ +    +   
Sbjct: 356 NLDFLCLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y     K +     ++ A+ L V++         +   +   L +         +
Sbjct: 416 MDV-AYHCYPNKCNDDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAP----QEDSA 470

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNNDDFWKTIDP 230
           +   Q   L+DW+   ++S                V+ GDFN         D   +    
Sbjct: 471 IRCGQLDLLQDWLADFRKSTSSSSTANPEELVAFDVVCGDFNFDNCSSD--DKLEQQHSL 528

Query: 231 NDSLIRFPKEKDSRCNAN 248
                   +         
Sbjct: 529 FTHYRDPCRLGPGEEKPW 546


>gi|325073605|gb|ADY76659.1| phosphatase [Streptomyces sp. DSM 5940]
          Length = 255

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/280 (10%), Positives = 73/280 (26%), Gaps = 47/280 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+       G  L ++  +              +   D++ LQE   Y+   + 
Sbjct: 6   LRIATWNM------GGGILGESHQRDGIPSLDYYASVLADHRPDVLCLQEAHDYDGRRES 59

Query: 84  FPKNTWC---IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-----GAKD 135
             +         +S    ++ S    +  +   I  R    + + + +P       G + 
Sbjct: 60  QSEYLARRLEYAHSLSFPLSVSHMAKDASLALGILSRFPIAKTVYKRFPRPQLVGTGPRG 119

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                 ++  +   + +  + +  ++ H        +     + +       A  L    
Sbjct: 120 ERWTLHDKGYMVGSIALGDRMLGFVNGHCFPLRRFGASATEPAFAPVWAMLTADLLA--- 176

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                       A D N         +     + P      F     +     K      
Sbjct: 177 ---VGGTGTAFAALDANHG----RIGEVLGDVLGPGHYRSAFEATPTTPGGGQK------ 223

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
             D+ +  +         + +E               SDH
Sbjct: 224 --DHILYGRALRLLSTTVAATE---------------SDH 246


>gi|73988016|ref|XP_542327.2| PREDICTED: similar to inositol polyphosphate phosphatase-like 1
           isoform 1 [Canis familiaris]
          Length = 1264

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + SWN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 434 IGSWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 491

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 492 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 547

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 548 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLSAFDISLRF-- 605

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 606 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 662

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 663 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 718

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 719 IVT-----SDHSPVFGTFE 732


>gi|260950097|ref|XP_002619345.1| hypothetical protein CLUG_00504 [Clavispora lusitaniae ATCC 42720]
 gi|238846917|gb|EEQ36381.1| hypothetical protein CLUG_00504 [Clavispora lusitaniae ATCC 42720]
          Length = 1040

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/319 (10%), Positives = 84/319 (26%), Gaps = 52/319 (16%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-- 74
           S ++++++   ++N+N     +          +   D        K+ D   V  +E+  
Sbjct: 619 SYSKEIKIFASTFNVNGDVSHDDNLREWIFPSKHDVD--------KDYDIIFVGFEEIIE 670

Query: 75  ------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                  +  +   +  +          +          +     IAV          + 
Sbjct: 671 LTAGNMMNVKSDNFIAWEKEIKKILEESKYTKEKYVSLWSWQMGGIAVLLFIKESHVSNI 730

Query: 129 PLLGA----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             +            + N+  + + +      +  +  HL +        +         
Sbjct: 731 SDIEGSVKKTGLGGMSANKGGIGISLTYAKTSLCFVCSHLAAGFSNIDERHQD------Y 784

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFWKTI 228
              A+ +     +K +     +  GDFN +I+    +                D   + +
Sbjct: 785 KTIAKGILFSKRKKIKDHEGVIWLGDFNYRIDLQNEHVKNLIKAGSFQKLFEYDQLNRQM 844

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNED 283
              +S   F + + +     K   N    D                ++  S  E L  E 
Sbjct: 845 ASGESFPFFNEMEITFPPTYKFDNNTKVYDTSEKQRI---PAWTDRILSMSKGETLKQEV 901

Query: 284 DIKSRGKRLSDHCPISIDY 302
                    SDH P+   +
Sbjct: 902 YDCEEDVIFSDHRPVYAIF 920


>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 1260

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 84/338 (24%), Gaps = 74/338 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEMGSYNA 79
              + + S+N+   S+             T     LL     N   AD++ LQE+     
Sbjct: 277 PGTLTVSSYNVLVDSKH---------PPATDRHPALLNTLISNNSVADVLLLQEVSD-KF 326

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +A +         Y         +            V            P          
Sbjct: 327 LAYLLGNERIRNIYPFATHGPPGQVGIGPLPSLRNIVALSRSNFSWSWLPFDTHHKGAVI 386

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
               R  ++  E       +  +HL S     +         ++  +Q Q L+D++    
Sbjct: 387 LKLDRIGKME-ESGFVPTIIAGVHLSSGLSDHT--------VTMRERQLQKLRDFL-LVN 436

Query: 200 ESLVPFVIAGDFNRKIN----------------------------------------YLG 219
            +  P V+AGDFN   +                                        +  
Sbjct: 437 HANNPKVVAGDFNMTTSAVTHEEAVEAKAISTETAAALPVLESMFLSAGFLDSWSVAHTT 496

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNA-----------NKNLRNKIPIDYFVMDQNAYK 268
             D    +    D    +  E+ +  +            +         D  +  ++  K
Sbjct: 497 MGDKMLPSRLERDFTQLYDGEQGATFDPLENPLAAISFISSANPRPHRYDRVLYQEDKLK 556

Query: 269 FLIQE--SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
            +      F     NE +  +  +  SDH  I     F
Sbjct: 557 VIHFNMFGFPVKRLNEANGNTELQFPSDHWGIRATLKF 594


>gi|313230572|emb|CBY18788.1| unnamed protein product [Oikopleura dioica]
          Length = 2983

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 76/237 (32%), Gaps = 20/237 (8%)

Query: 31   INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90
            +  LS    V++    +         +    +  + DI FL E+ S      +     W 
Sbjct: 1636 LKNLSRMRCVNINPGKISMKGEKLRDIVG--RTKNIDIYFLNELRSE--CEDIKNSACWP 1691

Query: 91   IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150
              +S   + +H K   +N I++A+  R   +  L +    +G         +R       
Sbjct: 1692 TGFS---MHSHEKLRDSNLIYSALMTRDSTIGGLIKETFSIGPITGLLLENHR------- 1741

Query: 151  EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
                ++I V  I+              +   S      +W+K  +   +      ++AGD
Sbjct: 1742 ---KERICVFSIYRPIPKEGKENCFYRNYENSDPKIFLRWIKKALEIARNRNAAVILAGD 1798

Query: 211  FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267
            FN   +    N+D    +   + L              K  +N   ID+ ++     
Sbjct: 1799 FNVDFDRSEGNNDLANELK--ELLKSLTDLCIHPTFFKKKCKN-SKIDHVMVSNPIR 1852


>gi|177773072|gb|ACB73267.1| synaptojanin 1 isoform a (predicted) [Rhinolophus ferrumequinum]
          Length = 1572

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 92/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAVELQKTVSRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               +  + L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIVRKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                        S     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|115479001|ref|NP_001063094.1| Os09g0394600 [Oryza sativa Japonica Group]
 gi|49389152|dbj|BAD26446.1| inositol 1,4,5-trisphosphate 5-phosphatase-like protein [Oryza
           sativa Japonica Group]
 gi|49389208|dbj|BAD26496.1| inositol 1,4,5-trisphosphate 5-phosphatase-like protein [Oryza
           sativa Japonica Group]
 gi|113631327|dbj|BAF25008.1| Os09g0394600 [Oryza sativa Japonica Group]
          Length = 401

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 71/257 (27%), Gaps = 33/257 (12%)

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           V  QE+ + +A  +   +  +    + + +           I  ++ VR      +    
Sbjct: 131 VLHQEITNSSATERSAQEEHFRCIMNKQMVG----------IFMSVWVRSNLRPYIHHLN 180

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL--LSQ 186
                       GN+ +V +   ++      +  HL S      +      +  +   ++
Sbjct: 181 VSCVGSGIMGYLGNKGSVSIRFVLHETSFCFVCCHLASGGKQGDVLLRNFDAADILVRTR 240

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDP 230
                   + +K       V+ GD N +I+                    ND        
Sbjct: 241 FPGGATQELPKKILDHDQVVLLGDLNYRISLEEAETRLLVEDKNWSILLENDQLLIEFST 300

Query: 231 NDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQ-NAYKFLIQESFSEILYNEDDI 285
                 + +   +     K      +     D  +  +  A  +  +  +      +   
Sbjct: 301 GRHFDGWQEGLITFSPTYKYHPNSDQYYWCFDGALGKKKRAPAWCDRILWRGKGLKQIQY 360

Query: 286 KSRGKRLSDHCPISIDY 302
            +   RLSDH P+   +
Sbjct: 361 DTCNYRLSDHRPVRAVF 377


>gi|241205936|ref|YP_002977032.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859826|gb|ACS57493.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 318

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 61/245 (24%), Gaps = 56/245 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
            RL+S+NI             N    T      +       +AD+V L E       + +
Sbjct: 95  FRLMSFNI----------AIDNWKNSTE-----ITHMVIASNADVVNLLEAKPLTFHLQQ 139

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F    + I                        V  K   V +Q   +   + +      
Sbjct: 140 LFKAYPYHI------------GCDAGKDTCDTLVLSKRPFVSRQVASMGSLRKNR----- 182

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   V+  G+ I ++  HL    F D               Q   L+D         
Sbjct: 183 --LVIASVDFGGETINLVSAHLTKPYFDD--------------FQMAELEDLGKALGSID 226

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V++GDFN             +               +            I ID+   
Sbjct: 227 GPLVLSGDFNSSAIAPSIQVFLREQ-------KLKTITPEPATWPIGAGALGIAIDHIFA 279

Query: 263 DQNAY 267
                
Sbjct: 280 RAPLQ 284


>gi|147770314|emb|CAN73640.1| hypothetical protein VITISV_043180 [Vitis vinifera]
          Length = 719

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/207 (10%), Positives = 52/207 (25%), Gaps = 38/207 (18%)

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           S R  +     A  V+   +    + +      D          +         ++  + 
Sbjct: 511 SGRFLDWKAMNAEGVKGGILICWDKRFL-----DILDWKEGHFTLSCRFXNVKNEVIWVF 565

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
             +         +  +     +                    P+ + GDFN  +     +
Sbjct: 566 TGVYGPFSKVXRDELWEEFXVIRGLW--------------EDPWCLGGDFNITLFQRERS 611

Query: 222 ---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                      F + +D    +    +  +   N   N +    +D F++  +       
Sbjct: 612 SQRRINLAMRRFAEIVDDLGLVDLPLQGGEFTWNGGHNNQAWARLDKFLVSPS------- 664

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  ++        + +SDH PI 
Sbjct: 665 ---WLDQFSGITQSRLPRPISDHFPII 688


>gi|281337694|gb|EFB13278.1| hypothetical protein PANDA_006066 [Ailuropoda melanoleuca]
          Length = 357

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 65/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S N+N L+                     +  + K  D  I  LQE       A  
Sbjct: 1   LSIISLNVNGLNAP--------------IKRHRVADWIKRHDPSICCLQETHFEPKDAFR 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +        +             +                           
Sbjct: 47  LRVRGWSTIFHANGPQKKAGVAILISDRLDFKLE-------------------------- 80

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 81  ---AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 132

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 133 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 191

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 192 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 231


>gi|71415753|ref|XP_809932.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL
           Brener]
 gi|70874389|gb|EAN88081.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi]
          Length = 612

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 60/214 (28%), Gaps = 23/214 (10%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++SWN+         + W ++ +    D+  +  + +   A+IV LQE+    A  +  P
Sbjct: 3   IISWNV---------AGWSSTSRMIREDFGSIASFLQRTQAEIVCLQEVKGSWAKLEADP 53

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                         +   R    D   +                    KD      +R  
Sbjct: 54  C---------GMGASDGGRTLAIDGWESFWSFSGKAHRGFNGVVSFVRKDLTWWCDSRPF 104

Query: 146 VELLVEINGKKIWVLDIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            E  +   G+ I          +   +++                + L   + ++  +  
Sbjct: 105 SEEDLNDEGRVIVTCHSAFVVVNTYVVNARHGQRMAFKMRFLSSLKNLLTQLKKQ--TGK 162

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           P ++ GD N+      +     + +         
Sbjct: 163 PVILLGDLNQTY-RAEDACWSLRRLSLPALRDLV 195


>gi|238750484|ref|ZP_04611985.1| hypothetical protein yrohd0001_21980 [Yersinia rohdei ATCC 43380]
 gi|238711415|gb|EEQ03632.1| hypothetical protein yrohd0001_21980 [Yersinia rohdei ATCC 43380]
          Length = 253

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 89/288 (30%), Gaps = 71/288 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             ++ +R++ WNI                ++     ++L+ +    DA ++ LQE  +  
Sbjct: 31  PTSEFLRVMVWNIF--------------KQQRAEWLSVLKDF--GRDAQLMLLQEAQTTP 74

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +                     + ++     A+      V  L  ++P+        
Sbjct: 75  ELVRFA---------------TSHYQAADQVPAFALPQHPSGVMTLAATHPVYCCPLRER 119

Query: 139 RAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R +   LV +    +G+ + V++IH  +F F   + +             + L+  
Sbjct: 120 EPLLRLSKSALVTVYPIHDGRLLMVVNIHAVNFSFGVDVYS-------------KQLEPI 166

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             Q      P ++AGDFN          +  +       L       D      ++    
Sbjct: 167 GEQIALHRGPVILAGDFNAW---SRQRVNALQRFAQGAGLAEVEFLSD-----YRSRAFG 218

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            P+D+    +                   D      R SDH P+ +++
Sbjct: 219 RPLDFVFYRE---------------LTLADASVLVTRASDHNPLLVEF 251


>gi|226356908|ref|YP_002786648.1| endonuclease/exonuclease/phosphatase family protein [Deinococcus
           deserti VCD115]
 gi|226318898|gb|ACO46894.1| putative endonuclease/exonuclease/phosphatase family protein
           [Deinococcus deserti VCD115]
          Length = 245

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 64/244 (26%), Gaps = 42/244 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +  T   A   R++++N+                + T      L Q  +  DADI+ LQE
Sbjct: 37  LFITGPSA---RIMTYNV---------------ARGTLGQPAALAQTPRAADADIILLQE 78

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                A      +     + + +                       +        PLL A
Sbjct: 79  SNFVRASDLAVIRAALPGYRAVQA----------------------HEVTSWTRLPLLDA 116

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           +        R+ +   +  N + + V++IHL +     +L+   +        +   ++ 
Sbjct: 117 ERLNLPLITRQILVTRLRWNAQPLTVINIHLGTVMLTSALKGDLARIRRTRDVRTAQIRV 176

Query: 194 WITQKKESLVPFVIAGDFNRKI--NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                  +    ++  D N         + D  W                          
Sbjct: 177 VTEIAARTQGRLLLGSDLNTPPRTGIPASADLVWMPGTRRGRARSRLDFSLIEAAYRSCD 236

Query: 252 RNKI 255
             + 
Sbjct: 237 GPRA 240


>gi|224367200|ref|YP_002601363.1| hypothetical protein HRM2_00760 [Desulfobacterium autotrophicum
           HRM2]
 gi|223689916|gb|ACN13199.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 362

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 57/253 (22%), Gaps = 45/253 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            +   L +  K    D++   E        K+        +     L N           
Sbjct: 113 RNADALIRLVKKHQPDVLVTLE-SDQWWEDKLKVLEAEMPYSIKCPLDNLYGMHVF---- 167

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
                            PL G +  +    +  ++   +E+             +     
Sbjct: 168 --------------SRLPLGGQEICYLVEKDIPSIHATLELRTGDKIRAHFLHPAPPSPT 213

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
               +              L        ES  P ++ GD N            ++ I   
Sbjct: 214 ENPESAERD--------AELVIVARSVAESDQPVIVTGDLNDVAWSATTR--LFRKIS-- 261

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                L  + P+D+    Q+              +   DI+     
Sbjct: 262 GLLDPRVGRGVFNTFHADYLIVRWPLDHLFHSQH--------------FTLQDIQRLPSI 307

Query: 292 LSDHCPISIDYDF 304
            SDH P+     F
Sbjct: 308 GSDHFPLLTILSF 320


>gi|327188349|gb|EGE55566.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CNPAF512]
          Length = 310

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 68/280 (24%), Gaps = 69/280 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
            RL+S+NI   +   G                 +   A    AD+V L E     A + +
Sbjct: 95  FRLMSFNIENDNFSNGG---------------AIADMAIASGADVVNLLEAEPVLAELPR 139

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     + +                        V  K   +  +         S      
Sbjct: 140 LLKTYPYYV------------GCGIGMQQCDTLVLSKRPLIEPR-------IRSLGLLWR 180

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            R     V+ +G+K+  L  HL    + +                   L+D         
Sbjct: 181 NRLTISTVDFDGRKVNFLTAHLTKPYYDEFYGL--------------ELEDLAAIAPTLP 226

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+AGDFN  I      +                   +            IPID+   
Sbjct: 227 GPLVLAGDFNSSILTPAVQNLLRTE-------GFGTVSLEPATWPIAASVFGIPIDHIFA 279

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   ++                    S+H  +  ++
Sbjct: 280 RAPLRLKSVRRIA-------------DSFGSNHFGLMAEF 306


>gi|315502361|ref|YP_004081248.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|315408980|gb|ADU07097.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 327

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/288 (10%), Positives = 69/288 (23%), Gaps = 63/288 (21%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A+    +RL++ N+   S                +D   L    +    D++ +QE+  
Sbjct: 96  PAADGPTLRLLTANLRLGS----------------ADPAALVDLVRTRRVDVLTVQELTP 139

Query: 77  YNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             A               S    +  +                         +PL     
Sbjct: 140 PLAAELDRLGLAELLPHRSLTPEVGSTGSGVYA------------------RHPLRDTGH 181

Query: 136 SFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             ++          + + G   + V   H  +      + + ++   +            
Sbjct: 182 RRNKGFFFTQAYATLTVPGAPPLRVESAHPAAPYAPHVVPDWWTDQRAQ----------- 230

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                      V+AGDFN  +++    D                           +    
Sbjct: 231 -PPATPDGGLSVLAGDFNATLDHAALRDLIATGYTDAADAAGAGFGGTWGPYDG-DPIPP 288

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + ID+ ++D+                     ++     SDH  +  + 
Sbjct: 289 VTIDHVLVDRRIAVRA--------------ARTYPVPGSDHRALLAEL 322


>gi|47216859|emb|CAG11666.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 433

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 40/166 (24%), Gaps = 26/166 (15%)

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                  L V+I   ++ V+++H +                         L   + +   
Sbjct: 289 FGPGVTHLSVQIGSLELAVVNVHAQEPASGAERH---------------ALSRSLQEALR 333

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                V+ GDF                +         P  + +  +      ++  +D  
Sbjct: 334 GEEELVVLGDFGGPRGSE------LDVLRKEKFCPLLPPTRFTDISTRSPQGSR-CLDNI 386

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGK----RLSDHCPISIDY 302
            + ++  K                            SDHCP+  + 
Sbjct: 387 WLSRSLRKLFSGHCLVVREGLTHPWIPDNWSWGGVASDHCPVVAEI 432


>gi|317508422|ref|ZP_07966092.1| endonuclease/Exonuclease/phosphatase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253269|gb|EFV12669.1| endonuclease/Exonuclease/phosphatase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 327

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/254 (11%), Positives = 61/254 (24%), Gaps = 31/254 (12%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
            +D     +  ++L  D++ L E+      A         + YS           +    
Sbjct: 104 KADPAAFVRQVRDLRPDVLTLNELNPDELAALRAAGLDEILPYSYTLPGLVRVGTTELYT 163

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
               A+  ++    Q  +   G            A+  L +    ++ V+ +H  +    
Sbjct: 164 ACETAIFSRHPLSGQGEFKQPGGGG-----FVNHALTALAQTPWGQVRVVAVHTLAVWTT 218

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                 ++    LL+         +          V+AGD N   ++           D 
Sbjct: 219 VLRNTGWAYELKLLAA--------LLPLLPRDERVVVAGDLNATYDHAAFRALLA---DG 267

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
                                +    ID+ +                             
Sbjct: 268 YADAGAQAGAGIVPTWEQGTAKQLFEIDHVLTRNGTGTGFRSFPI--------------- 312

Query: 291 RLSDHCPISIDYDF 304
           + SDH  +     F
Sbjct: 313 QGSDHLGVVATVAF 326


>gi|109107809|ref|XP_001114794.1| PREDICTED: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase
           2-like isoform 4 [Macaca mulatta]
          Length = 1258

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 82/319 (25%), Gaps = 61/319 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  + +        +       D  +   QE  +G    +  +
Sbjct: 428 IGTWNMGSVPPPKNVTSWF-TSRGLGKTLDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 485

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 486 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 541

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 542 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLSAFDISLRF-- 599

Query: 200 ESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKTIDPNDS 233
                    GD N +++                              +  F +  +   S
Sbjct: 600 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 656

Query: 234 LIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
                + +    +     +              D  +       +             DD
Sbjct: 657 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW----KSYPETHIICNSYGCTDD 712

Query: 285 IKSRGKRLSDHCPISIDYD 303
           I +     SDH P+   ++
Sbjct: 713 IVT-----SDHSPVFGTFE 726


>gi|39652288|dbj|BAD04858.1| reverse transcriptase [Tetraodon nigroviridis]
          Length = 1119

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 74/296 (25%), Gaps = 78/296 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + + + N+                 ++      +  +  +  +D+  +QE         
Sbjct: 2   TLTISTINVR--------------SVKSRVRAQSVLSFLNSFKSDVFLIQEC-------- 39

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             P       +            SNN+ +  +A+  KN +VL +   ++           
Sbjct: 40  GLPFLKQYRHWEEMWPQTSIWSGSNNNRNDGVAILIKNPQVLVKGSTVVRDGR------- 92

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             A+   +   G+   +L+I+  +                        L + +       
Sbjct: 93  --ALLAQLTFMGQDFNLLNIYGFNEKNDRYD-----------------LLEDLQSHMLGK 133

Query: 203 VPFVIAGDFNRKINYLGNNDD---------------FWKTIDPNDSLIRFPKEKDSRCNA 247
           VP V+ GDFN  ++                        +     D        ++     
Sbjct: 134 VPLVVGGDFNCILSRKDRRGAGEDFKVDKTSVLLQGICRDFKLQDCFKTMHPREEGFTWF 193

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +      IDY                        D +      SDH  +S    
Sbjct: 194 SGDGTRASRIDYTFTRD---------------CPISDARLTPVFFSDHLMLSCTLS 234


>gi|122053846|gb|ABM65904.1| APEX1 [Ateles geoffroyi]
          Length = 159

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 39/174 (22%), Gaps = 44/174 (25%)

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
                  ++  ++ +                   +  + L         S  P V+ GD 
Sbjct: 1   AEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA--------SRKPLVLCGDL 52

Query: 212 NRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRN-- 253
           N     +   +                 F + +        F     +   A        
Sbjct: 53  NVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMM 112

Query: 254 -------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                     +DYF++  +    L                      SDHCPI++
Sbjct: 113 NARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL-----------GSDHCPITL 155


>gi|74001107|ref|XP_856403.1| PREDICTED: similar to synaptojanin 1 isoform b isoform 2 [Canis
           familiaris]
          Length = 944

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 93/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 540 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 599

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 600 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 659

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 660 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 713

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 714 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 773

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 774 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 833

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                        S     +    +   G+   + SDH P+    D
Sbjct: 834 EDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 879


>gi|289178050|gb|ADC85296.1| Hypothetical membrane spanning protein [Bifidobacterium animalis
           subsp. lactis BB-12]
          Length = 397

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 74/287 (25%), Gaps = 36/287 (12%)

Query: 21  AQKVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           ++ + + S N   +  L+     +++  + +   ++   +    +  D  ++ LQEM   
Sbjct: 110 SENLTISS-NSAAVENLA-NGHFNVFTLNCRYGEANAHEIVNTVRTNDIAVLALQEMSPD 167

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                        + +      +     S+N     + +R +         P+  A    
Sbjct: 168 LVTELHDAGLDDLLPFHQFGDPSS----SDNGGFNGLWLRVEPAEQTPTGVPIPAADVPT 223

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                     +              H KS        +        L++ A   +D    
Sbjct: 224 VTLPVTSTFNITF---------ASAHPKSPQRSCKDWSAGIIGLGALAKSANKDRDRNAD 274

Query: 198 KKESLVPF-VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
              +     V+ GD N  I +    +                   +     +     +I 
Sbjct: 275 DSCNNREIAVLMGDLNSSIVHPSFRELLASGFHDAA---LVEARGEHPTYPSWLKWPRIV 331

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ID+ +         ++  F +                DH  ++    
Sbjct: 332 IDHILFTDFMTASNVRAVFIDGT--------------DHLGLTATLT 364


>gi|213155867|ref|YP_002317912.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii
           AB0057]
 gi|213055027|gb|ACJ39929.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii
           AB0057]
          Length = 379

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/251 (10%), Positives = 63/251 (25%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL ++ + L  D++   E  +            W             +     D  
Sbjct: 114 DKYHLLLEHVRTLKPDLLLTLESDTT-----------WENALKEIEKDYPYRVPVPLDNL 162

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   +L  +              ++  +G  + +  +H K     +
Sbjct: 163 YGMHLYSRLPLKNTEVKFILSNEIPSIHT-------TVILRSGMPVQLYCLHPKPPSPTE 215

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++T   +          L     Q K+     ++ GD N            ++ I   
Sbjct: 216 AKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS-- 262

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +    ++     
Sbjct: 263 GLLDPRVGRHFINTFHADYPLLRWSLDHIFHS--------------TDFGLVKMQRLSHI 308

Query: 292 LSDHCPISIDY 302
            SDH P+ +  
Sbjct: 309 GSDHFPVYVVL 319


>gi|296207536|ref|XP_002750672.1| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase-like
           [Callithrix jacchus]
          Length = 748

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 81/309 (26%), Gaps = 61/309 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           + ++N+N  S +E +  W             L +  +  D   V  QE+           
Sbjct: 269 VGTYNVNGQSPKECLRPW-------------LSEGIEAPDVYCVGFQELDLSKEAFFFHD 315

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFS 138
              +  W    S     +             I     V++++   + +            
Sbjct: 316 TPKEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKREHAAYISEVEAETVGTGIMG 375

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R GN+  V +  + +   I V++ HL +    ++  N          Q  Q         
Sbjct: 376 RMGNKGGVAIRFQFHNTSICVVNSHLAAHTEENARRNQDYKDICSRMQFYQLDPSLPPLT 435

Query: 199 KESLVPFVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSLIRFPKEK 241
                  +  GD N +I  +                    D     +D       F + +
Sbjct: 436 ISKHDVILWLGDLNYRIENMDVEKVKKLIEEKDFQTLYEYDQLKIQVDKKTVFEGFTEGE 495

Query: 242 DSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +     K              R     D  +           ++ +++ Y         
Sbjct: 496 LTFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MA 543

Query: 290 KRLSDHCPI 298
            + SDH P+
Sbjct: 544 LKTSDHKPV 552


>gi|147779794|emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera]
          Length = 1851

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 35/109 (32%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINY---------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  +                 F   ID    +    +      +   N +
Sbjct: 874 DEPWCLGGDFNSTLYQRERSHQGRITPIMRRFAHIIDDLGLVDLPLQGGVFTWSGGLNNQ 933

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +   +D F++  +              ++    +   + +SDH PI ++
Sbjct: 934 SWARLDRFLVSPSWLDK----------FSGMIQRRLPRPVSDHFPILLE 972


>gi|194228265|ref|XP_001491905.2| PREDICTED: oculocerebrorenal syndrome of Lowe [Equus caballus]
          Length = 893

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 81/313 (25%), Gaps = 49/313 (15%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 230 QTFRFFIGTWNVNGQSPDSGLEPWLNCDPSP---------------PDIYCIGFQELDLS 274

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 275 TEAFFYFESVKEQEWSMAVERALHFKAKYKKVQLVRLVGMMLLIFARKDQWRYIRDIATE 334

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 335 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 394

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTID------PNDSLIR 236
            +             +  GD N ++     N        +D  + +              
Sbjct: 395 NQTLPQLNIMKHDVVIWLGDLNYRLCMPDANEVKSLINKNDLQRLLKFDQLNIQRTQKKA 454

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL---- 292
           F    +         +     D +    ++ K  +      IL+   ++     R     
Sbjct: 455 FADFIEGEIKFTPTYKYDSKTDRW---DSSGKCRVPAWCDRILWRGTNVNQLHYRSHMEL 511

Query: 293 --SDHCPISIDYD 303
             SDH P+S  ++
Sbjct: 512 KTSDHKPVSALFN 524


>gi|307095166|gb|ADN29889.1| 2-phosphodiesterase [Triatoma matogrossensis]
          Length = 334

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 70/219 (31%), Gaps = 23/219 (10%)

Query: 22  QKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           ++ R+VS+NI          ++ E  +   +          L  Q     +ADI+ LQE+
Sbjct: 115 ERFRVVSYNILADLYAETDVAKTELFAYCASYALSLDYRKQLYLQEIVGYNADIICLQEV 174

Query: 75  GS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
                 N +  V     +    + +         +         V      + ++     
Sbjct: 175 DVKVFDNELQDVLGFKNFQGVLTRKGATVAEGVATFYSTQKFRLVETMTSELGEEIDVRP 234

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDI-------------HLKSFCFLDSLENTYS 178
             K+ ++     + +    +     + VL +             +   F   D+      
Sbjct: 235 IYKNIWTSIKENQNLRERFKERNTVLQVLILESIWDPAKKIVVGNTHLFFHPDADHIRLL 294

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
           P+  +L+     LK   ++  +  + F++ GDFN   + 
Sbjct: 295 PAGMILAFLENILKHLKSKYPKDTLSFLLCGDFNSTADS 333


>gi|224012699|ref|XP_002295002.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220969441|gb|EED87782.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 400

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 63/257 (24%), Gaps = 26/257 (10%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAV 116
           Q  + L  DI+ + E                            +   +  + +      +
Sbjct: 79  QTIQELGIDIIAMCESNRAWTYKNKQEYERQTHLLWHNTRTVFASCPTGAEGYQPGGNVL 138

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSL 173
                   +         + F     R       +++        V          L + 
Sbjct: 139 NINGPAAGRVKATGTNKWERFCWMELRGQRDEGWVIISA----YRVCQEESHRPGALTAY 194

Query: 174 ENTYSPSCSL-------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
              Y+   S          Q    L   IT K+E     ++  D N       +  +   
Sbjct: 195 MQQYTAMLSAGITRPNPRQQILDDLLHLITSKREQGFRPILLMDANEDWVTNSHGKNQLA 254

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                 +L     E+  +        N   +DY ++D  A   +              + 
Sbjct: 255 DFMAAANLQDAFYERHQQSPPTYTRGN-SRLDYILVDPVASPCI---------RRVGYLG 304

Query: 287 SRGKRLSDHCPISIDYD 303
           +     SDHC   +D+D
Sbjct: 305 THEGNFSDHCLEYVDFD 321


>gi|24380384|ref|NP_722339.1| hypothetical protein SMU.2046c [Streptococcus mutans UA159]
 gi|24378406|gb|AAN59645.1|AE015027_3 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 273

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 70/273 (25%), Gaps = 54/273 (19%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--------------- 95
                +L +     D D++ +QE+              +C    T               
Sbjct: 18  QKKLEILGKTILENDYDVICVQEVNQLLHSEPAKDLPNYCQVAGTPAIHKDNYALQLVTF 77

Query: 96  -------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148
                              +     +A+  K   V      L+   D       RRA+  
Sbjct: 78  LLEQERVYYWSWAYNHIGYDRFQEGVAILSKTPLV--SQGILISDVDDEHDYHTRRALLG 135

Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA 208
             +I+ + I ++ +H+  +      E           +                +P ++ 
Sbjct: 136 KTKIDQEDIAIVSLHMSWWNKGFQGEWNKLERVLSNLK----------------LPLLLM 179

Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMD 263
           GDFN      G       ++   DS                 +  +  +  + +DY  + 
Sbjct: 180 GDFNNPYENEGYQAILKSSLKLQDSHQSAKITYGKATIQKEIDGWQGNQEALKVDYVFLS 239

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            +      +  F    Y           +SDHC
Sbjct: 240 SDWQVEKSEVIFDGKHYP---------MISDHC 263


>gi|88797191|ref|ZP_01112781.1| catabolite repression control protein [Reinekea sp. MED297]
 gi|88780060|gb|EAR11245.1| catabolite repression control protein [Reinekea sp. MED297]
          Length = 253

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/268 (10%), Positives = 68/268 (25%), Gaps = 61/268 (22%)

Query: 59  QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           Q+ ++ D D+V +Q+     Y           +  F+      +++     +        
Sbjct: 21  QWLEHQDVDVVCVQDTRAKEYQLPEAFLEVPGYNAFFFDADEDDYAGTAIYSRT------ 74

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
                 +     P    +  F            ++ +   + V  + +            
Sbjct: 75  -MPKAIIRGFGNPTYDLQGGF------------IQADFDNVSVASVWVPPAY-------- 113

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------------LGN 220
           Y        +  + L+  + + +     F+ AG +                         
Sbjct: 114 YLEDVDAKLEYLEALQQHLKRTRRKRRDFIFAGSYQIAHRSVDLGNWERHQRDPGFLPEE 173

Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-----RNKIPIDYFVMDQNAYKFLIQESF 275
                + + P   +  F                    N   +DY ++  N   F+++ + 
Sbjct: 174 RAWMDQAVGPIGFVDAFRLTNKQDRQHTFWPFDEAQANGSRLDYQLITPNLADFVVEATI 233

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                              HCP+ ++YD
Sbjct: 234 LREPRMSP-----------HCPVLVEYD 250


>gi|303282637|ref|XP_003060610.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458081|gb|EEH55379.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 811

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 75/265 (28%), Gaps = 28/265 (10%)

Query: 13  LVPCTASVAQKVRLVSWNINTLS----EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           L          VR++++N+   +      +       +            +  +    D+
Sbjct: 226 LASLGEPRVDGVRVMTYNVLADAYSHTWSQLYPYLSPANADAEGRLPKAMEDVRLARPDV 285

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN----VRVL 124
           V LQE+ +    A   P+     +     L   +          A A R +     V  L
Sbjct: 286 VCLQEVDAKWYDAFWVPQMRVAGYAPAGTLSEKTGLTREGVATFARADRWRVATSAVVSL 345

Query: 125 QQSYPLLGAKDSFSRAGNRRAVE------------LLVEI------NGKKIWVLDIHLKS 166
            +  P      + +    + A+E             ++E       +G +   + +    
Sbjct: 346 TRPGPSPAESATEAWIRTQPALEEALGKVSTVGQIAVLEPVAAGGADGGRRRPIVVANAH 405

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDF 224
             F     +        L + A+ L+    +   +      ++ GDFN + +        
Sbjct: 406 LFFHPGATHLRVLQARWLLRHAETLRRAWGRDSGAGDDVGLIVCGDFNGEAHDGVVRYVA 465

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANK 249
             T+  + S             +++
Sbjct: 466 DGTLRASHSDWALGSVFRWGGTSSR 490



 Score = 35.7 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 17/70 (24%), Gaps = 11/70 (15%)

Query: 246 NANKNLRNKIPIDYFVMDQN-----------AYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             N        +D+  +D                     +        +      +  SD
Sbjct: 739 YTNFVRGFVGALDWVFVDGGDDDGGKGRRGGLRATNATAAPPLDALTAETALPNSEFPSD 798

Query: 295 HCPISIDYDF 304
           H P+  D +F
Sbjct: 799 HIPMVADLEF 808


>gi|260809051|ref|XP_002599320.1| hypothetical protein BRAFLDRAFT_199990 [Branchiostoma floridae]
 gi|229284597|gb|EEN55332.1| hypothetical protein BRAFLDRAFT_199990 [Branchiostoma floridae]
          Length = 278

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 80/281 (28%), Gaps = 43/281 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L+S N+  L E+                 + +  Y     AD++FLQE    N    V
Sbjct: 6   LSLISLNVRGLLEKN--------------KRSSILSYINRQKADVIFLQETHFTNDTRYV 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      T+       +   ++    +A+       L        + DS  R    
Sbjct: 52  L----------TKEWQGPCFQSFGSNCSRGLAIL--IKPTLNFVLHDCNSVDSDGRT--- 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + L   I G ++ +++I+  +     +     +            L        ++ +
Sbjct: 97  --LVLNCIIEGVELCLVNIYAPNKTKERNDFFKKASIWLNCHDPINLLCGGDMNCVQNPL 154

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
                G  +  +  +    +    +D  D+      +       N        +DY+++ 
Sbjct: 155 VDKKGGRADTALRSVTAMKNLCSKLDMCDAWRSVNPDTRQYTWRNLAQNVACRLDYWLIH 214

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +   + + +      +              DH  + +   F
Sbjct: 215 KRLVENIEKCDIRPAILT------------DHQAVFLKLRF 243


>gi|308808326|ref|XP_003081473.1| Apurinic/apyrimidinic endonuclease and related enzymes (ISS)
           [Ostreococcus tauri]
 gi|116059936|emb|CAL55995.1| Apurinic/apyrimidinic endonuclease and related enzymes (ISS)
           [Ostreococcus tauri]
          Length = 447

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 66/254 (25%), Gaps = 39/254 (15%)

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                 + K+     +  + +   L    +  +   +  A+    K    + ++  L G 
Sbjct: 164 AEDKAVMEKMLGGYPFREYDAHFCLAGAKRYGTCVLVKKAL----KKPIRVARTLALDGT 219

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             S           LL+E   +K+ VL+ ++             +     + +       
Sbjct: 220 DASPDDIDTNEGRVLLLEY--EKVIVLNTYVPHNGGNPERWEKRAMWDFRVKRFL----- 272

Query: 194 WITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRF 237
                 +     +  GD N     L                      +  I     ++  
Sbjct: 273 ---THYKGKKDVIWLGDLNCAHRDLDVAPSPEQFIGVGGFTVPERQRFTDILSTSDMVDA 329

Query: 238 PKEKDSRCNANKNLR------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-- 289
            +                     + +DYF++ +     L     S   +++   + R   
Sbjct: 330 YRALHGDRQTFTWRGIGMGSGLAMRLDYFIVPRTFVHRLKSCETSTDRFDDAVARERPIS 389

Query: 290 -KRLSDHCPISIDY 302
               SDHC + +  
Sbjct: 390 CFFGSDHCALYLTL 403


>gi|10720298|sp|O18964|SYNJ1_BOVIN RecName: Full=Synaptojanin-1; AltName: Full=Synaptic
           inositol-1,4,5-trisphosphate 5-phosphatase 1; AltName:
           Full=p150
          Length = 1324

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 92/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPMDIFPI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W          ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +        N      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNDD---- 703

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 704 --FLEIARKLSFPMGRLLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|294054800|ref|YP_003548458.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614133|gb|ADE54288.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 284

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 88/286 (30%), Gaps = 63/286 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           ++  +  LV WNI                    +D   L +     D+ +V LQE     
Sbjct: 56  ALPSEFELVCWNIEKGGNTG-----------WKADLRRLAR-----DSQLVLLQEAI--- 96

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            V ++       +++S     ++ +  S     +   V+     +L+   PLL +     
Sbjct: 97  YVEEMKQPREETLYWSFAPGYHNGRHQSGVMSVS--WVQPDLFCLLEAVEPLLRSPKQT- 153

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  + + +E +   + V+++H  +F                  +Q + +   I+  
Sbjct: 154 -----GVLSMPLEGSPVPLLVVNMHAINFTLGT----------KAFRRQLEAVGHIISGY 198

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P V AGD N        N    K +            +       ++ +    +D
Sbjct: 199 PG---PIVFAGDLNTW------NQPRLKALKAFAETHALEAVEFEP--DLRSQKMGHVVD 247

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           Y  +       L  ES S +              SDH P+ +   +
Sbjct: 248 YVFVRG-----LTVESRSVVPVKT----------SDHNPMIVTLRY 278


>gi|47077039|dbj|BAD18453.1| unnamed protein product [Homo sapiens]
          Length = 264

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/293 (9%), Positives = 77/293 (26%), Gaps = 77/293 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ N+N L+                     L  + K+ D  +  +QE         +
Sbjct: 8   ITILTLNVNGLNTP--------------IKRHRLASWIKSQDPSVCCIQE-------THL 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K+ + +     R      + +       +A+                           
Sbjct: 47  ICKDAYRLKIKGWRK---IYQANRKQKKAGVAIL-------VSDKSDFKPTKIKRDKKGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-L 202
             + +   +  +++ +L+I+  +                      +++ + +   + +  
Sbjct: 97  YIM-VKGSMQQEELTILNIYAPNTGAP------------------RFINEVLRDPQRNLD 137

Query: 203 VPFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
              +I GDFN  +             +    N    +    +      PK  +    +  
Sbjct: 138 SHTIIMGDFNTPLSIFDRSTRQKVNKDTQDLNLTLQQADLRDIYRTLHPKSTEYTFFSAL 197

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +       D+ +  +       +   +               LSDH  I ++ 
Sbjct: 198 HHTYSKT-DHILGSKALLSKCKRTEITTNC------------LSDHSAIKLEL 237


>gi|47218437|emb|CAG03709.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 889

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 52/157 (33%), Gaps = 8/157 (5%)

Query: 21  AQKVRLVSWNI--NTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76
             ++R++ WNI    L E  +            +    L+ +        I+ LQE+   
Sbjct: 600 GGRMRVMQWNILAQALGEGLDSFVRCPPEALSWSRRKYLILEEILGHRPHILCLQEVDHY 659

Query: 77  YNAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
           ++ +  V     +   +  +        + ++  D        K+   +   +  L   K
Sbjct: 660 HDTLQPVLAGLGYGSSFCPKPWSPCLQVEGNNGPDGCALFFDHKRYDFLDSVNIRLSAMK 719

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
              ++     A  L     GK++ V   HLK+    +
Sbjct: 720 IPTNQVAV--ATVLRCRSTGKRVCVAVTHLKARSGWE 754


>gi|258621016|ref|ZP_05716050.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258586404|gb|EEW11119.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 281

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 82/313 (26%), Gaps = 47/313 (15%)

Query: 1   MIRKYVL---------ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M ++Y +           VFF +    S  + V +   N          +     + +  
Sbjct: 1   MKKRYWILPILLSAIGIFVFFSIFTIPSQPELVTIG-HNQQGEPLLCYQNPKPQVLDQDG 59

Query: 52  SDYTLLRQYAKNLDADI-VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
               L+    K    +    L +  +   +  +   N    F +           +    
Sbjct: 60  QINLLVWNIYKQNRPNWQAALADFSAPQQLLLLQEANMNEAFKAWISQYGWDGTQTRAFE 119

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCF 169
               A    N+  +  +      +        + A+     ++ + ++ V+++H  +F +
Sbjct: 120 AFGEAAGVINLAKVMPAMACAYTQLEPWLRLPKSAIYARYRLSNQQELAVVNLHAVNFTY 179

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                           +Q   L D +        P ++AGDFN               + 
Sbjct: 180 GT----------QEYQEQIAALLDELRSFAG---PVIVAGDFNSW--SEARMALLSAALT 224

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                    +  +          N +P+D+        K                     
Sbjct: 225 DIGLQTVVFESDNRTTFI-----NGLPLDHVFYRGLILKKAEA---------------PQ 264

Query: 290 KRLSDHCPISIDY 302
              SDH P+ + +
Sbjct: 265 SDASDHNPLLVSF 277


>gi|229491364|ref|ZP_04385188.1| endonuclease/exonuclease/phosphatase [Rhodococcus erythropolis
           SK121]
 gi|229321649|gb|EEN87446.1| endonuclease/exonuclease/phosphatase [Rhodococcus erythropolis
           SK121]
          Length = 321

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 59/305 (19%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR--TTSDYTLLRQ 59
            R  +LA+   L+   A+V   + +        SE +G +L           +D   L  
Sbjct: 66  RRWILLAISVVLIAAGAAVISPLYVA-----NSSEIDGPTLRVMQANLLFGQADPASLTA 120

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             +    D++ +QE+    ++                 L+          I+        
Sbjct: 121 TVREKAVDVLTVQEL--TTSLEGSLRDQGLEQLLPHHYLVPDEAGGGGAGIY-------- 170

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                   YPL   ++           E+        + V            +  + ++ 
Sbjct: 171 ------SRYPLTDTRELNGFGPTNLVAEVGFSTPFTLLAV-----HPGPAYVTPPDVWTA 219

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
             S L                +    +++GDFN    +    D     +          +
Sbjct: 220 ELSTLRNALDA--------AAAEETVIVSGDFNTTFTHKQFRD-----LLDVGYSDAADQ 266

Query: 240 EKDSRCNANKNL-RNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                        +      ID+ ++     K L +                    SDH 
Sbjct: 267 LGVGIVRTYPADKKFPAIVGIDHVLLRGGQAKSLERIDIE---------------GSDHF 311

Query: 297 PISID 301
            + +D
Sbjct: 312 GLIVD 316


>gi|194227462|ref|XP_001492268.2| PREDICTED: synaptojanin 2 [Equus caballus]
          Length = 1452

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 87/342 (25%), Gaps = 72/342 (21%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--------IVFL 71
           +++R+   +WN+N   +     L    +     D   L         D         V  
Sbjct: 493 KRLRIAMGTWNVNGGKQFRSNLLGTAELADWLLDSPTLSG--AEESPDDSSPADIFAVGF 550

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRV 123
           +EM   +A   V    T    +  +     S+      + +A        I VR  +V  
Sbjct: 551 EEMVELSAGNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPF 610

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           ++             +AGN+ AV +  +++   +  +  HL +        N      + 
Sbjct: 611 IRDVAIDTVKTGMGGKAGNKGAVGIRFQLHSTSLCFVCSHLTAGQSQVKERNEDYREIT- 669

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR- 236
                Q L     +   S       GDFN +I+              WK +   D L   
Sbjct: 670 -----QKLSFPTGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQ 724

Query: 237 --------FPKEKDSRCNANK-------------------------NLRNKIPIDYF--- 260
                      E                                    R + P D     
Sbjct: 725 KSSGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRRRHPFDRTAGE 784

Query: 261 --VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             ++D +                         + SDH P+  
Sbjct: 785 LNLLDNDLDADTKVRHTW-SPGALKYYGRAELQASDHRPVLA 825


>gi|74001113|ref|XP_856530.1| PREDICTED: similar to synaptojanin 1 isoform b isoform 4 [Canis
           familiaris]
 gi|74001115|ref|XP_856570.1| PREDICTED: similar to synaptojanin 1 isoform b isoform 5 [Canis
           familiaris]
          Length = 927

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 93/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 523 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAI 582

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W +        ++      ++    +     +R ++ 
Sbjct: 583 GFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 642

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 643 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 696

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 697 EDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 756

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 757 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 816

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                        S     +    +   G+   + SDH P+    D
Sbjct: 817 EDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSDHRPVVALID 862


>gi|224076326|ref|XP_002194163.1| PREDICTED: myosin IC [Taeniopygia guttata]
          Length = 545

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 93/322 (28%), Gaps = 61/322 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + LV+WN+ T S    V+               L      +D  ++ LQE+ S   N ++
Sbjct: 92  LHLVTWNVGTASPPPDVTS-----------LLQLNSTGPAMDMYVIGLQEVNSKITNFLS 140

Query: 82  KVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRV--LQQSYPLLGAKDSFS 138
            +   + W IF+ T      + K  S       + +  K+V +  ++  +        + 
Sbjct: 141 DLAFDDPWSIFFMTVLSPLGYIKLSSVRMQGLLLLIFVKHVHLPFIRDIHTDYTRTGLYG 200

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + + + G  I  ++ HL +                 +  + + +   +   
Sbjct: 201 YWGNKGGVSVRMSLFGHTICFMNCHLPAHMENTEQRLDDFEKILEMQFEGEDIPSPLDH- 259

Query: 199 KESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDSLIRFPKEK 241
                     GD N +I   G +                 D      +  + L  F +  
Sbjct: 260 ----ELLFWFGDLNFRIADYGIHFVRESISNKRFNLLWEKDQLNMAKNREEFLKDFKEGP 315

Query: 242 DSRCNANKNL------------RNKIPIDYFV---------MDQNAYKFLIQESFSEILY 280
                  K              R     D  +           +       +   S  L 
Sbjct: 316 LQFKPTYKFDLDSEVYDTSEKKRKPAWTDRILWKVKNLSEVASKEGEFSEEENPISVTL- 374

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
               +      +SDH P++  +
Sbjct: 375 -NSYVSHMSYGISDHKPVTGTF 395


>gi|27366556|ref|NP_762083.1| hypothetical protein VV2_0099 [Vibrio vulnificus CMCP6]
 gi|27358122|gb|AAO07073.1| hypothetical protein VV2_0099 [Vibrio vulnificus CMCP6]
          Length = 308

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/252 (11%), Positives = 59/252 (23%), Gaps = 46/252 (18%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L  Y   +  D+V LQE+ + +        + +   +  +  +            
Sbjct: 101 QHVDQLIDYLSRVQPDLVLLQEVTAQHLEQLKMLDDVYRYRFGGQPKVGLPSHQ------ 154

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
               +  +           L   D F   G +     + +++ +    L           
Sbjct: 155 ---LIFSRQP---------LYGMDVFYIEGYQNLTRGIWQVDEEHPVFLLTAHPPSPRNK 202

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
            +    +     L  QA                 +I GD N   N        + T+   
Sbjct: 203 EMWLRRNALIQALEYQATQ---------SPTKDILIMGDMNLSANSER-----FDTLFSG 248

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                     +       +      ID+  ++ +      +     I             
Sbjct: 249 MQTAPIASWPNLPTLTLPSWLQIS-IDHLWLNSDFAICKRESIDEVI------------- 294

Query: 292 LSDHCPISIDYD 303
            SDH  I    +
Sbjct: 295 GSDHRAIMTYLN 306


>gi|63100298|gb|AAH94726.1| Oculocerebrorenal syndrome of Lowe [Homo sapiens]
          Length = 893

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 283 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 403 NQTLPQLNIMKHEVVIWLGDLNYRLGMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 462

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 463 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 514

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 515 SH----MELKTSDHKPVSA 529


>gi|327284840|ref|XP_003227143.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1-like [Anolis
           carolinensis]
          Length = 897

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 73/302 (24%), Gaps = 45/302 (14%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYNAVAKV 83
           + +WN+N  S   G+  W N                     D+  V  QE+         
Sbjct: 238 VGTWNVNGQSPDSGLEPWLNCDP---------------EPPDLYCVGFQELDLSTEAFFY 282

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTA-------IAVRKKNVRVLQQSYPLLGAKDS 136
           F       + +      HSK                 +  RK++   ++           
Sbjct: 283 FDSTKEQEWLTAVEKALHSKAKYKKVQLVRLVGMMLLVFARKEHYSYIRDIMAETVGTGI 342

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             + GN+  V +    +     +++ HL +        N                +    
Sbjct: 343 MGKMGNKGGVAVRFVFHNTSFCIVNSHLAAHVEDFERRNQDYKDICARMSFLPPDQGLPQ 402

Query: 197 QKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTID------PNDSLIRFPKEKD 242
                    +  GD N ++            + ++  K +              F    +
Sbjct: 403 LTIMKHDVVIWLGDLNYRLCLPDANNVKTMISKNELQKLLTYDQLNIQRTQKTAFADFTE 462

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----DIKSRGKRLSDHCP 297
              N     +     D    D +    +       +    D            + SDH P
Sbjct: 463 GEINFIPTYKFDSKTDR--WDSSGKCRVPAWCDRILWRGTDVNQLQYRSHMDLKTSDHKP 520

Query: 298 IS 299
           +S
Sbjct: 521 VS 522


>gi|224029661|gb|ACN33906.1| unknown [Zea mays]
          Length = 343

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 65/327 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87
           +WN+  L+  + + L      +             + D  ++  QE+   NA   + PK 
Sbjct: 17  TWNVGGLAPPDDLDLEDWLDTKND-----------SYDIYVLGFQEIVPLNARNVLGPKQ 65

Query: 88  T-----WCIFYSTERLINHSKRDSNNDIHTA-----------------IAVRKKNVRVLQ 125
                 W +                +                      +  R    R ++
Sbjct: 66  RRAAMKWQLLIGDALNSTRHGAAGMHGQGQGGAFRCLMSKQMVGIFVSVWTRSSLCRHVR 125

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        R GN+ AV + + ++G     +  HL S           + +  +LS
Sbjct: 126 HPGVCSVGAGVLGRLGNKGAVSVRLLLHGTSFCFVCCHLASGGEKGDALRRNADAAGILS 185

Query: 186 QQ-------AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---------------- 222
           +               + +K       V+ GD N +I    +                  
Sbjct: 186 RTSFLGFGGVAAAPGEVPKKILGHDRVVLLGDLNYRIAMDDDEARQLVRARKWGMLLEGD 245

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI----DYFVMDQN----AYKFLIQES 274
           +    +        + +   +     K  RN   +    D     +     A  +  +  
Sbjct: 246 ELLLELSSGRQFHGWHEGHVTFAPTYKYSRNSDHLHWCADGVAAGREKQHRAPAWCDRIL 305

Query: 275 FSEILYNEDDIKSRG-KRLSDHCPISI 300
           +      +   +  G  RLSDH P+  
Sbjct: 306 WRGKGMKQVRYERCGCYRLSDHRPVRA 332


>gi|147862108|emb|CAN82955.1| hypothetical protein VITISV_005180 [Vitis vinifera]
          Length = 622

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 2/90 (2%)

Query: 12  FLVPCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
            +    +S A    ++S+NI +   + +                   L       DADI+
Sbjct: 221 IVFESQSSNADTFSVLSYNILSDIYASRSAHVKCPGWALAWEYRRKNLLLEITGYDADII 280

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
            LQE+ S +      PK T   +  T +  
Sbjct: 281 CLQEVQSDHLENYFKPKLTKRGYSVTYKKK 310


>gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria
           maculans]
          Length = 1224

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/332 (10%), Positives = 79/332 (23%), Gaps = 77/332 (23%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + A K+ + S+NI T SE       +  V       T L         DI+ LQE+    
Sbjct: 268 ASACKISIASYNIKTDSEYPPERDREPLVASNILSDTALA--------DILVLQEVSDDF 319

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
               +        +                     + +  +                 + 
Sbjct: 320 LSYFLNDTEVRKRYRFASHGPPDQLDIGPLRSMRNVVILSRWSFRWSS----GPFHRKYM 375

Query: 139 RAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              ++ A+       +  +++ ++   +   C L         S +    Q + L  ++ 
Sbjct: 376 SPRHKGALIAQFMDLLASERMDLVVAGVHLTCGLTDG------SVAAKHNQLKRLTGYLA 429

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIR---- 236
           +   S  P+++AGDF+   +    +                      ++           
Sbjct: 430 ENHASS-PWIVAGDFDIATSAYTIDPAPKAKSITEQTAVLLSSLESGLNQAGLADAWSIA 488

Query: 237 ----------------FPKEKDSRCNA----------NKNLRNKIPIDYFVMDQNAYKFL 270
                           +  E  +  +           N         D   +        
Sbjct: 489 RLEGKLDITMGDSEESYDGEAGATFDPRNNALAADSTNTFENRPQRYDRIFVR------- 541

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              S   +     ++       SDH  +    
Sbjct: 542 ---SHEALRVGHFNLFGVQSIASDHYGVRATL 570


>gi|325068218|ref|ZP_08126891.1| exodeoxyribonuclease III Xth [Actinomyces oris K20]
          Length = 154

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 32/140 (22%), Gaps = 33/140 (23%)

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-----------------FWKTIDPN 231
             + + +   ++     V+AGD N   +     +                          
Sbjct: 21  ARMAELLAAARDGGSQVVMAGDLNVVRSERDIKNWKPNHNKIAGVMDEEIAHLEGWFASG 80

Query: 232 DSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNE 282
                     D           +           IDY V+     +     +        
Sbjct: 81  WVDASRHLVGDEEQGPYTWWSQRGKAFDNNTGWRIDYQVLTPALAERAHSVTV------- 133

Query: 283 DDIKSRGKRLSDHCPISIDY 302
           D       R SDH P+ ++Y
Sbjct: 134 DRAPDYASRWSDHAPLVVEY 153


>gi|149038084|gb|EDL92444.1| sphingomyelin phosphodiesterase 3, neutral [Rattus norvegicus]
          Length = 655

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 78/303 (25%), Gaps = 75/303 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A AK+  +    +        +       +   +++ +    +   
Sbjct: 354 NLDFLCLQEVFDKRAAAKLKEQLHGYFEYILYDVGVYGCHGCCNFKCLNSGLFFASRYPV 413

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y       SF    ++ A+ L V++         +   +   L +         +
Sbjct: 414 MDV-AYHCYPNGCSFDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPP----EDSA 468

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +  +Q   L+DW+   ++S                VI GD N                  
Sbjct: 469 IRCEQLDLLQDWLADFRKSTSSTSTANPEELVVFDVICGDLNFDNCSSDDKLEQQHSLFT 528

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSR----------------CNANKNL 251
                              T+   + L                             +K+ 
Sbjct: 529 RYKDPCRLGPGEEKPWAIGTLLDINGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSP 588

Query: 252 ------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                        N   IDY +  +       +    E  +           L+DH P++
Sbjct: 589 GAGQKGRKDLLKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVA 643

Query: 300 IDY 302
           +  
Sbjct: 644 MRL 646


>gi|147794985|emb|CAN76142.1| hypothetical protein VITISV_007730 [Vitis vinifera]
          Length = 728

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 48/176 (27%), Gaps = 33/176 (18%)

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
           D          +    +I    +  +   +         E  +    ++           
Sbjct: 39  DILDWEEGHFTLSCRFKIMENGVTWVFTGVYGPFTKXEREGMWEELGAVRGLW------- 91

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRC 245
                    P+ + GDFN  +     +           F + +D  + +    +  +   
Sbjct: 92  -------DDPWCLGGDFNITLFQQERSSQRRITSAMRRFAEXVDELELVDMPLQGGEFTW 144

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           N   N +    +D F++                ++N        + +SDH PI ++
Sbjct: 145 NGGLNNQVWARLDRFLVSPT----------WLEMFNGATQIRLSRPISDHFPIVLE 190


>gi|73921264|sp|O35049|NSMA2_RAT RecName: Full=Sphingomyelin phosphodiesterase 3; AltName:
           Full=Confluent 3Y1 cell-associated protein 1; AltName:
           Full=Neutral sphingomyelinase 2; Short=nSMase-2;
           Short=nSMase2; AltName: Full=Neutral sphingomyelinase II
          Length = 655

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 78/303 (25%), Gaps = 75/303 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A AK+  +    +        +       +   +++ +    +   
Sbjct: 354 NLDFLCLQEVFDKRAAAKLKEQLHGYFEYILYDVGVYGCHGCCNFKCLNSGLFFASRYPV 413

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y       SF    ++ A+ L V++         +   +   L +         +
Sbjct: 414 MDV-AYHCYPNGCSFDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPP----EDSA 468

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +  +Q   L+DW+   ++S                VI GD N                  
Sbjct: 469 IRCEQLDLLQDWLADFRKSTSSTSTANPEELVVFDVICGDLNFDNCSSDDKLEQQHSLFT 528

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSR----------------CNANKNL 251
                              T+   + L                             +K+ 
Sbjct: 529 RYKDPCRLGPGEEKPWAIGTLLDINGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSP 588

Query: 252 ------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                        N   IDY +  +       +    E  +           L+DH P++
Sbjct: 589 GAGQKGRKDLLKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVA 643

Query: 300 IDY 302
           +  
Sbjct: 644 MRL 646


>gi|209695831|ref|YP_002263761.1| hypothetical protein VSAL_I2407 [Aliivibrio salmonicida LFI1238]
 gi|208009784|emb|CAQ80091.1| putative nuclease [Aliivibrio salmonicida LFI1238]
          Length = 284

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 74/282 (26%), Gaps = 62/282 (21%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             + ++ WNI           +K   +        L Q      AD+V LQE      + 
Sbjct: 61  GTINVLVWNI-----------YKQQKQDWEPALRKLTQ-----KADLVLLQEASLTPELK 104

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                 ++             +     D    +    K   V  +      A + + R  
Sbjct: 105 AFIIDKSYSAELV--------RAFDVFDTSAGVLSLAK---VQAERACAHTAIEPWLRLP 153

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +      N + + V+++H  +F                   Q   L+  +      
Sbjct: 154 KSALLSEYALSNDESLMVVNVHAINFTLGIEDYQR----------QMSDLEKEVKNHVG- 202

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
             P ++AGDFN   +               +      KE     +        +P+D+  
Sbjct: 203 --PLILAGDFNSWSSARLEA-------LDQEVARLRLKEVRFTPDERMIFMTGLPLDHVF 253

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                              N  +  S     SDH P+ + + 
Sbjct: 254 YRG---------------LNVKEAHSIKSNASDHNPLEVSFS 280


>gi|325578602|ref|ZP_08148702.1| endonuclease/exonuclease/phosphatase [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325159838|gb|EGC71968.1| endonuclease/exonuclease/phosphatase [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 283

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 85/285 (29%), Gaps = 70/285 (24%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            + +  L++WN++           K   K    D   L +      AD V LQE   Y  
Sbjct: 66  ASSRFNLITWNVH-----------KGQDKGWQEDLERLSK-----QADFVLLQEATQYQN 109

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           ++                    +    ++     +    K     Q  +   G       
Sbjct: 110 LSTF-----------------STALFVSSFSFNELLSGVKTFTQTQPEWYCGGGVAEPII 152

Query: 140 AGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              + A  + + +  G  + ++++HL +F +            S    Q + L   I   
Sbjct: 153 QIPKVASVMNLPLEKGNSLLLINVHLINFEW----------EISAYQTQLEQLFSLIENY 202

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           + S    V+AGDFN        N+D    ++             S+    + L     +D
Sbjct: 203 QGS---IVMAGDFNAW------NEDRLNLVNNLMRKYGLDSVALSQDERVRFLGYP--LD 251

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           Y          ++  +   +              SDH P+ + ++
Sbjct: 252 YIFTRG---VKVVSATSEVVT------------SSDHNPLLMTFE 281


>gi|121222076|gb|ABM47607.1| APEX1 [Saguinus labiatus]
          Length = 158

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/170 (11%), Positives = 39/170 (22%), Gaps = 44/170 (25%)

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215
              ++  ++ +                   +  + L         S  P V+ GD N   
Sbjct: 4   SFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA--------SRKPLVLCGDLNVAH 55

Query: 216 NYLGNNDD----------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRN------ 253
             +   +                 F + +        F     +   A            
Sbjct: 56  EEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARS 115

Query: 254 ---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                 +DYF++  +    L                      SDHCPI++
Sbjct: 116 KNVGWRLDYFLLSHSLLPALCDSKIRSKAL-----------GSDHCPITL 154


>gi|332808487|ref|XP_003308037.1| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase
           isoform 1 [Pan troglodytes]
          Length = 748

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 61/314 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           + ++N+N  S +E + LW             L    +  D   V  QE+           
Sbjct: 269 VGTYNVNGQSPKECLQLW-------------LSNGIQAPDVYCVGFQELDLSKEAFFFHD 315

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFS 138
              +  W    S     +             I     V++++   + +            
Sbjct: 316 TPKEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMG 375

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R GN+  V +  + +   I V++ HL +        N          Q  Q         
Sbjct: 376 RMGNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLT 435

Query: 199 KESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEK 241
             +    +  GD N +I  L                    D     +        F + +
Sbjct: 436 ISNHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEDFTEGE 495

Query: 242 DSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +     K              R     D  +           ++ +++ Y         
Sbjct: 496 LTFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MA 543

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+S  +D
Sbjct: 544 LKTSDHKPVSSVFD 557


>gi|253570952|ref|ZP_04848360.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_6]
 gi|251839901|gb|EES67984.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_6]
          Length = 217

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 73/279 (26%), Gaps = 71/279 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN       + +               +L         ++V +QE G++      
Sbjct: 10  MKICTWNSQGNPLNDAI------------KLNILNHLLTTEQCNVVMIQECGNF------ 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                            HS R     +  A A   +    +      + +         R
Sbjct: 52  ------------ILPAQHSGRYHYVVVEHAGAYNCRCNTCIIADLNFVASIHYLISGTGR 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            A+   +  NG  I+ L     S    D                   ++D +        
Sbjct: 100 SAIC--LNYNGCNIYTLHCESGSGAVGD-------------------IRDLVRHAVS--- 135

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           PF+I GD N   + L       + +              + C    +   +  +DYF++D
Sbjct: 136 PFIIGGDMNSTPSELSEY---LRIMTTGTRSRPGNSANFACCGMPTHFSGRE-LDYFLID 191

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                      +                  DH P+ ++ 
Sbjct: 192 SRLQLRTCVRRYHMKGG-------------DHYPVILEI 217


>gi|146415196|ref|XP_001483568.1| hypothetical protein PGUG_04297 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 543

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 103/364 (28%), Gaps = 87/364 (23%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----G 75
            ++ +RLV++N+N +        W    +             + L ADIV LQE+     
Sbjct: 17  SSRTLRLVTFNVNGVKTIFNYHPWNGHKQCFD-------TLLQYLKADIVSLQELKLTAQ 69

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI--AVRKKNVRVLQQSYPLLGA 133
           + ++      +         +    +S       I      AV KKN+ V +    L G 
Sbjct: 70  NLSSTKIGNTQKYRSFVSVPKTKKGYSGVGLFVRIPNENEDAVLKKNLSVAKAEEGLTGY 129

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS------------- 180
             S  + G R     + E  G     +D    S    +    +   +             
Sbjct: 130 LFSPDKKGLRYRELAVEECIGCYPTDIDDETCSKLDSEGRCISVQLASGLIIFSLYCPAN 189

Query: 181 -------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------- 226
                          + L +   + +E     +I GD N  ++ + + D   +       
Sbjct: 190 SSGTEEGEIQRLLFLRVLLERCKRLEEKGNEVIIMGDINVALDLIDHADYMRESFKQGTL 249

Query: 227 --TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
             +++ +       K   + C   K+      +    +  ++   L+  S  + LY+   
Sbjct: 250 KHSLNSSGDGSELEKLNLAECLKFKDSTPARSLLNAYVHPSSESMLVANSSKQFLYDTTR 309

Query: 285 IKSRGK---------------------------------------------RLSDHCPIS 299
              + +                                               SDHCP+ 
Sbjct: 310 EVQKRRLGMYTVWNTLTGARQSNFGSRIDLILTSSKALCKNVSSANIWPFLHGSDHCPVY 369

Query: 300 IDYD 303
            D++
Sbjct: 370 TDFE 373


>gi|307189212|gb|EFN73660.1| CCR4-NOT transcription complex subunit 6 [Camponotus floridanus]
          Length = 314

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 20  VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            A+   ++ +N+  +  + ++      +           +    ++  ADI+ LQE+ + 
Sbjct: 96  QARIFTVMCYNVLCDKYATRQMYGYCPSWALDWEYRKKGILDEIRHYAADIISLQEVETD 155

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSY 128
                  P+     +       + +K  + ND       AI  R     ++++  
Sbjct: 156 QFYNFFLPELKHDGYDGIFSPKSRAKTMAENDRKYVDGCAIFYRTAKFSLIKEHL 210


>gi|311739953|ref|ZP_07713787.1| possible exodeoxyribonuclease III [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311305026|gb|EFQ81095.1| possible exodeoxyribonuclease III [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 305

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/340 (12%), Positives = 78/340 (22%), Gaps = 97/340 (28%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA 81
            + + S N+N +             +R  ++   +  + +   ADIV +QE+  +     
Sbjct: 2   TLTIASVNVNGIRA--------ACKQRNENN-PGMNAWLEETPADIVLMQEVRATPEQAE 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K         ++          R         I  R     V         A        
Sbjct: 53  KALAPALEAGWHLALADAAAKGRA-----GVGILSRTPLADVEVGFGSFTDAGRW----- 102

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    + I V  ++L S    D+           L +  + L +        
Sbjct: 103 --------IAATTRDIRVASLYLPSG---DTGSPKLDEKYRFLDEFQEVLAENAAHTNSD 151

Query: 202 LVP--FVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDS----------- 233
             P   VI GD+N                   +L     F   +                
Sbjct: 152 GSPADMVIGGDWNICHRAQDLKNNKANEKKAGHLPEERAFMDHVFGAFPDDKPQEKKNLG 211

Query: 234 ----------------------LIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                                      +              +           IDY  +
Sbjct: 212 QWQGVVEYAGGEPWSPAAEPQWFDVARRLHPEEDGPYTWWTYRGQAFNNNAGWRIDYQAV 271

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +   +   +          D   +  +R SDH P+ ++Y
Sbjct: 272 TRPMLERAQRTWV-------DKAPTVEQRWSDHSPLLVEY 304


>gi|330723787|gb|AEC46157.1| Membrane nuclease, lipoprotein [Mycoplasma hyorhinis MCLD]
          Length = 444

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/363 (11%), Positives = 96/363 (26%), Gaps = 93/363 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------- 76
           V+L  WNI      + V+  K+S  +T     +L +     +AD+V L E+ +       
Sbjct: 82  VKLGFWNILNY---DDVNSNKDSFAKT-YKAQMLAKTISFNNADVVGLVEVNAGSNKENG 137

Query: 77  -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--------------- 120
             + V  +   +    + S      + + + +     A   +                  
Sbjct: 138 VDSIVKNLNNLDKEAKWTSIVSDPVYGEGNESQKERVAFIFKSSLFDILEINKEKLYGSN 197

Query: 121 VRVLQQSYPLLGAKDSFSRA--------------------GNRRAVELLVEING--KKIW 158
             +L    P+  +  ++                         R  V    ++    ++  
Sbjct: 198 PYLLVYDNPVFDSVPAYFAKSKVSKGKATFDDKLTTKNVDFARPPVAAKFKLKNTEEEFV 257

Query: 159 VLDIHLKSFCFLDSLENT------------YSPSCSLLSQQAQWLKDWITQKKE--SLVP 204
           V+  H  S    ++                 S + S    +A  + + +   +   +   
Sbjct: 258 VVASHFDSPGVNNNPTAKGKEEGEVDNTKFDSRNGSQELSEANHMLEAMNWFENKTNTQN 317

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-- 262
                D N K      ND+ ++ +           + +               D      
Sbjct: 318 QFFMADTNIKEKS---NDNAFEHLL--TQYKLLISKTNKTTLGKNFDTYSSSYDKIFFKK 372

Query: 263 -----------------------DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                                   +N    +++   ++   ++D        +SDH P+ 
Sbjct: 373 EGKLTVDKVYKYPLYDLIKDKLTSENELSQVLENKKNKSNSSKDIKARIRNFISDHSPVF 432

Query: 300 IDY 302
           +  
Sbjct: 433 VSI 435


>gi|147797602|emb|CAN78035.1| hypothetical protein VITISV_031077 [Vitis vinifera]
          Length = 844

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 19/108 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ I GDFN  +     +          +F + +D    +    +  D   N   + +
Sbjct: 102 EDPWCIGGDFNITLFSRERSGQRRISSAMRNFAEIVDDLGLVDLPLQGGDFTWNGGLHNQ 161

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +D F++  +              ++  +     + +SDH PI +
Sbjct: 162 TWARLDRFMVSPS----------WIDQFSGINQCRLPRPVSDHFPIML 199


>gi|33152045|ref|NP_873398.1| cytolethal distending toxin protein B [Haemophilus ducreyi 35000HP]
 gi|2102683|gb|AAB57726.1| cytolethal distending toxin protein B [Haemophilus ducreyi]
 gi|33148267|gb|AAP95787.1| cytolethal distending toxin protein B [Haemophilus ducreyi 35000HP]
          Length = 283

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 85/309 (27%), Gaps = 45/309 (14%)

Query: 2   IRKYVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           +++  +     L   ++       ++ +WN+   S         N           +RQ 
Sbjct: 4   VKQLSVVFCVMLFSFSSYANLSDFKVATWNLQGSSAVNESKWNIN-----------VRQL 52

Query: 61  AKNLD-ADIVFLQEM---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                 ADI+ +QE           S        P   +     T    N      +   
Sbjct: 53  LSGEQGADILMVQEAGSLPSSAVRTSRVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSRLD 112

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170
             A  V    V   Q     +   DS     +R AV + +   G  ++     L +    
Sbjct: 113 VGANRVNLAIVSRRQADEAFIVHSDSSV-LQSRPAVGIRI---GTDVFFTVHALATGGSD 168

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                    + SL+           +  +  +  +++ GDFNR    L         +  
Sbjct: 169 ---------AVSLIRNIFTTFNSSSSPPERRVYSWMVVGDFNRAPANLEVALRQEPAVSE 219

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           N  +I   +            R+   +DY ++         Q           +      
Sbjct: 220 NTIIIAPTE---------PTHRSGNILDYAILHDAHLPRREQARERIGASLMLNQLRSQI 270

Query: 291 RLSDHCPIS 299
             SDH P+S
Sbjct: 271 T-SDHFPVS 278


>gi|225680794|gb|EEH19078.1| synaptojanin-1 [Paracoccidioides brasiliensis Pb03]
          Length = 1237

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 86/322 (26%), Gaps = 55/322 (17%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEM 74
           S ++++R  + ++N+N    +   +   +           L     + D  I  V  QE+
Sbjct: 606 SSSKRIRIWVGTFNVNG---RSDGAKVTDLSPWLLPHLDRL-----HEDPAIFAVGFQEI 657

Query: 75  GSYNAVAKVFPKNTWCIFY----------STERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
              +    +       I +             R          +      A+       L
Sbjct: 658 VELSPQQIMSTDPGNRIIWENAVKNTLNDYANRKGVSEYVLLRSGQLVGTALLIFVKSEL 717

Query: 125 QQSYPLLGA----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSP 179
                 +            AGN+    + ++ +  +I  +  HL +     D     Y  
Sbjct: 718 LTDIKAVEGSVKKTGMSGMAGNKGGCAIRLQCSNTRICFVTAHLAAGFSNYDERNRDYQT 777

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK----------------INYLGNNDD 223
               L  Q         +  E     +  GDFN +                +  L  ND 
Sbjct: 778 ISQGLRFQR-------NRSIEDHDAIIWLGDFNYRIGLPNDRVRGLIKDGDLESLYENDQ 830

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYN 281
               +    +   + + + +     K        D     +      +  +  +      
Sbjct: 831 LNLQMVAGLTFPFYSEARITFPPTYKYDNGTDLYD---TSEKARIPAWCDRVLWKGGNLR 887

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
           + +  +   + SDH P+   +D
Sbjct: 888 QLEYNAASLKFSDHRPVHATFD 909


>gi|190347850|gb|EDK40199.2| hypothetical protein PGUG_04297 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 543

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 104/364 (28%), Gaps = 87/364 (23%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----G 75
            ++ +RLV++N+N +        W    +   +    L        ADIV LQE+     
Sbjct: 17  SSRTLRLVTFNVNGVKTIFNYHPWNGHKQCFDTSLQYL-------KADIVSLQELKLTAQ 69

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI--AVRKKNVRVLQQSYPLLGA 133
           + ++      +         +    +S       I      AV KKN+ V +    L G 
Sbjct: 70  NLSSTKIGNTQKYRSFVSVPKTKKGYSGVGLFVRIPNENEDAVLKKNLSVAKAEEGLTGY 129

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS------------- 180
             S  + G+R     + E  G     +D    S    +    +   +             
Sbjct: 130 LFSPDKKGSRYRELAVEECIGCYPTDIDDETCSKLDSEGRCISVQLASGLIIFSLYCPAN 189

Query: 181 -------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------- 226
                          + L +   + +E     +I GD N  ++ + + D   +       
Sbjct: 190 SSGTEEGEIQRLLFLRVLLERCKRLEEKGNEVIIMGDINVALDLIDHADYMRESFKQGTL 249

Query: 227 --TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
             +++ +       K   + C   K+      +    +  ++   L+  S  + LY+   
Sbjct: 250 KHSLNSSGDGSELEKLNLAECLKFKDSTPARSLLNAYVHPSSESMLVANSSKQFLYDTTR 309

Query: 285 IKSRGK---------------------------------------------RLSDHCPIS 299
              + +                                               SDHCP+ 
Sbjct: 310 EVQKRRLGMYTVWNTLTGARQSNFGSRIDLILTSSKALCKNVSSANIWPFLHGSDHCPVY 369

Query: 300 IDYD 303
            D++
Sbjct: 370 TDFE 373


>gi|156085014|ref|XP_001609990.1| endonuclease/exonuclease/phosphatase family protein [Babesia bovis]
 gi|154797242|gb|EDO06422.1| endonuclease/exonuclease/phosphatase family protein [Babesia bovis]
          Length = 597

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/366 (12%), Positives = 93/366 (25%), Gaps = 76/366 (20%)

Query: 13  LVPCTASVAQKVRLVSWNIN---TLSEQEG----VSLWKNSVKRTTSDYTLLRQYAKNLD 65
                 S +  +R++S+NI     ++  E          +    ++    L+ +    L 
Sbjct: 232 ATSPLQSDSMDLRVMSFNILSPTYVATDEAIQRFFPYCPHEWLDSSYRNPLILREIFLLR 291

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---------- 115
             I+ LQE  +      + P      +         S       I   I           
Sbjct: 292 PHILCLQECATSAYRNYIEPVLGQQYYSWLTIKNTTSDEGCCIFIKKDIFDVVDVQSLMF 351

Query: 116 ----VRKKNVRVLQQ----SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
               +R +   +L +    ++     K  FS+      +   V  + +K   L +     
Sbjct: 352 KEQILRPEYSDLLNRIGAPNWLNYDEKTYFSKFHTVFQLGCFVNRSNEKSNYLFLANSHL 411

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQ----KKESLVPFVIAGDFNRKINYLGNNDD 223
            F  S ++       +L  + +  K           E+    +I GDFN   +    +  
Sbjct: 412 YFHPSGKHIRLLQTYVLLYELERFKKRCGDKFGFDIETESVTIICGDFNSFSSEGAYHLV 471

Query: 224 FWKTI----DPNDSLIRFPKEKDSRC---------------------------------- 245
               I    +  +  +R+  E+                                      
Sbjct: 472 VNGWIPYHHEDFEYGLRYSHERFIPSAQNKQYLDSRMNGTPYSFGEQSERLEVPNYQGYH 531

Query: 246 ---------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                      N        +DY     N          +     E +        SDH 
Sbjct: 532 DAYSGHELPFTNFVKTFSGTLDYIFHSNNIKVKRCLPGITTRDAQEYEGLPSKLYPSDHI 591

Query: 297 PISIDY 302
            I+ D+
Sbjct: 592 SIAADF 597


>gi|317047016|ref|YP_004114664.1| endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b]
 gi|316948633|gb|ADU68108.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b]
          Length = 264

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 88/289 (30%), Gaps = 71/289 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    +R++ WNI                K+  +D+  + Q     DA +V LQE  +  
Sbjct: 39  TADPTLRVLVWNIF---------------KQQRADWMSVLQGFGK-DAHLVLLQEAQTTP 82

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +    N                  ++      +      V  L  ++P+        
Sbjct: 83  ELVRFATTN---------------YLAADQVPAFVLPQHPSGVMTLASAHPVYCCPLRER 127

Query: 139 RAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R A   LV      NG+ + V++IH  +F     + +             + L   
Sbjct: 128 EPLLRLAKSALVTAYPLPNGEMLMVVNIHAVNFSLGIDVYS-------------KQLGPI 174

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             Q +    P ++AGDFN        +    + +      +   +   +  +  K     
Sbjct: 175 GEQIQYHRGPVIMAGDFNAW------SRQRMRALFRFAQDMALQEVTFTDDHRRKAFGRP 228

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +D+          + + S                R SDH P+ ++++
Sbjct: 229 --LDFVFYRD---MKVSEASVLVT------------RASDHNPLLVEFN 260


>gi|310766699|gb|ADP11649.1| hypothetical protein EJP617_19680 [Erwinia sp. Ejp617]
          Length = 253

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 88/286 (30%), Gaps = 63/286 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +   +++++ WNI                K+  +D+  + Q     +A +V LQE  +  
Sbjct: 24  TATTRLKVLVWNIF---------------KQQRADWLSVLQNFGK-NAHLVLLQEAQTTP 67

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + + F    + +       +          + +A AV        ++    L       
Sbjct: 68  ELVR-FATTNYLVADQVPAFVLPQHPSGVMTLASAHAVYCC-PLREREPLLRLSKS---- 121

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  V      N + + V++IH  +F     + +             + L     Q 
Sbjct: 122 -----ALVTAYALPNDQVLMVVNIHAVNFSLGIDVYS-------------KQLGPIGEQI 163

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P ++AGDFN   +    N  +    +     +RF  +   +            +D
Sbjct: 164 VHHQGPVIMAGDFNAW-SRQRINALYRFAREMGLREVRFTDDHRRKAFGRP-------LD 215

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +          + + S                R SDH P+ +++DF
Sbjct: 216 FIFYRG---MRVAEASVLVT------------RASDHNPLLVEFDF 246


>gi|257791630|ref|YP_003182236.1| Endonuclease/exonuclease/phosphatase [Eggerthella lenta DSM 2243]
 gi|257475527|gb|ACV55847.1| Endonuclease/exonuclease/phosphatase [Eggerthella lenta DSM 2243]
          Length = 357

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/286 (10%), Positives = 75/286 (26%), Gaps = 58/286 (20%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T      +R+++ N    +                +D   +    ++   +++ +QE+  
Sbjct: 121 TTPRDTVMRVMTLNTKNGN----------------ADAEQIVSIVRDQHVEVLAMQEVSG 164

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                              E L +     +    +  + V      +   S  +L    S
Sbjct: 165 SLIERLSAAGL-------DELLPSRVIGLAGAGDNGGVNVIYTLAPMRNASESILPLTGS 217

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                        +     ++ ++  H  S           S +          L+ +  
Sbjct: 218 AVP-------ACTITAGSHEVRLVSAHPTSPKTGTLGFWNESLTN------LGTLRRYSD 264

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN--LRNK 254
           +       ++I GDFN   ++         T+                   +        
Sbjct: 265 E-------YLIMGDFNSTWDHSRYRKMLGDTLVDASEQAGEGFHMTYPSEPHYAMVPVPP 317

Query: 255 IP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +  ID+ V  +N+              +  D+++   + SDH  + 
Sbjct: 318 MIEIDHIVYSKNS------------GMSVGDLETVNVQGSDHFALL 351


>gi|226292490|gb|EEH47910.1| SacI domain and endonuclease/exonuclease/phosphatase family protein
           [Paracoccidioides brasiliensis Pb18]
          Length = 1237

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 86/322 (26%), Gaps = 55/322 (17%)

Query: 19  SVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEM 74
           S ++++R  + ++N+N    +   +   +           L     + D  I  V  QE+
Sbjct: 606 SSSKRIRIWVGTFNVNG---RSDGAKVTDLSPWLLPHLDRL-----HEDPAIFAVGFQEI 657

Query: 75  GSYNAVAKVFPKNTWCIFY----------STERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
              +    +       I +             R          +      A+       L
Sbjct: 658 VELSPQQIMSTDPGNRIIWENAVKSTLNDYANRRGVSEYVLLRSGQLVGTALLIFVKSEL 717

Query: 125 QQSYPLLGA----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSP 179
                 +            AGN+    + ++ +  +I  +  HL +     D     Y  
Sbjct: 718 LTDIKAVEGSVKKTGMSGMAGNKGGCAIRLQCSNTRICFVTAHLAAGFSNYDERNRDYQT 777

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK----------------INYLGNNDD 223
               L  Q         +  E     +  GDFN +                +  L  ND 
Sbjct: 778 ISQGLRFQR-------NRSIEDHDAIIWLGDFNYRIGLPNDRVRGLIKDGDLESLYENDQ 830

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYN 281
               +    +   + + + +     K        D     +      +  +  +      
Sbjct: 831 LNLQMVAGLTFPFYSEARITFPPTYKYDNGTDLYD---TSEKARIPAWCDRVLWKGGNLR 887

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
           + +  +   + SDH P+   +D
Sbjct: 888 QLEYNAASLKFSDHRPVHATFD 909


>gi|226306062|ref|YP_002766022.1| hypothetical protein RER_25750 [Rhodococcus erythropolis PR4]
 gi|226185179|dbj|BAH33283.1| hypothetical membrane protein [Rhodococcus erythropolis PR4]
          Length = 321

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 77/305 (25%), Gaps = 59/305 (19%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR--TTSDYTLLRQ 59
            R  +LA+   L+   ASV   + +        SE +G SL           +D   L  
Sbjct: 66  RRWILLAISVVLIAVGASVISPLYVA-----NSSEIDGPSLRVMQANLLFGQADPVSLTA 120

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
             +    D++ +QE+    ++                 L+          I+        
Sbjct: 121 TVREKAVDVLTVQEL--TTSLEGSLRDQGLEQLLPHHYLVPDEAGGGGAGIY-------- 170

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
                   YPL   ++           E+        + V            +  + ++ 
Sbjct: 171 ------SRYPLTETRELNGFGPTNLVAEVGFSTPFTLLAV-----HPGPAYVTPPDVWTA 219

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
             S L                +    +++GDFN    +    D     +          +
Sbjct: 220 ELSTLRNALDA--------AAAEETVIVSGDFNTTFTHKQFRD-----LLDVGYSDTADQ 266

Query: 240 EKDSRCNANKNL-RNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                        +      ID+ ++     K L +                    SDH 
Sbjct: 267 LGVGIVRTYPADKKFPAIVGIDHVLLRGAQAKSLERIEIE---------------GSDHY 311

Query: 297 PISID 301
            + +D
Sbjct: 312 GLIVD 316


>gi|183601837|ref|ZP_02963206.1| hypothetical protein BIFLAC_06146 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219682752|ref|YP_002469135.1| endonuclease/exonuclease/phosphatase precursor [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190328|ref|YP_002967722.1| hypothetical protein Balac_0269 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195734|ref|YP_002969289.1| hypothetical protein Balat_0269 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218722|gb|EDT89364.1| hypothetical protein BIFLAC_06146 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219620402|gb|ACL28559.1| endonuclease/exonuclease/phosphatase precursor [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240248720|gb|ACS45660.1| hypothetical protein Balac_0269 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250288|gb|ACS47227.1| hypothetical protein Balat_0269 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295793315|gb|ADG32850.1| hypothetical protein BalV_0262 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 389

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/287 (10%), Positives = 74/287 (25%), Gaps = 36/287 (12%)

Query: 21  AQKVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           ++ + + S N   +  L+     +++  + +   ++   +    +  D  ++ LQEM   
Sbjct: 102 SENLTISS-NSAAVENLA-NGHFNVFTLNCRYGEANAHEIVNTVRTNDIAVLALQEMSPD 159

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                        + +      +     S+N     + +R +         P+  A    
Sbjct: 160 LVTELHDAGLDDLLPFHQFGDPSS----SDNGGFNGLWLRVEPAEQTPTGVPIPAADVPT 215

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                     +              H KS        +        L++ A   +D    
Sbjct: 216 VTLPVTSTFNITF---------ASAHPKSPQRSCKDWSAGIIGLGALAKSANKDRDRNAD 266

Query: 198 KKESLVPF-VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
              +     V+ GD N  I +    +                   +     +     +I 
Sbjct: 267 DSCNNREIAVLMGDLNSSIVHPSFRELLASGFHDAA---LVEARGEHPTYPSWLKWPRIV 323

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           ID+ +         ++  F +                DH  ++    
Sbjct: 324 IDHILFTDFMTASNVRAVFIDGT--------------DHLGLTATLT 356


>gi|164451503|ref|NP_776893.2| synaptojanin-1 [Bos taurus]
 gi|296491675|gb|DAA33708.1| synaptojanin-1 [Bos taurus]
          Length = 1300

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 92/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-------AKNLDADIV 69
           S  +K+R+   +WN+N   +   ++    ++     D   L          +K +D   +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPMDIFAI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNV 121
             +EM   NA   V      +  W          ++      ++        + +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +        N      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNDD---- 703

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 704 --FVEIARKLSFPMGRLLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|10946902|ref|NP_067466.1| sphingomyelin phosphodiesterase 3 [Mus musculus]
 gi|73921263|sp|Q9JJY3|NSMA2_MOUSE RecName: Full=Sphingomyelin phosphodiesterase 3; AltName:
           Full=Neutral sphingomyelinase 2; Short=nSMase-2;
           Short=nSMase2; AltName: Full=Neutral sphingomyelinase II
 gi|8247281|emb|CAB92970.1| neutral sphingomyelinase II [Mus musculus]
 gi|12859706|dbj|BAB31745.1| unnamed protein product [Mus musculus]
 gi|27695352|gb|AAH43077.1| Sphingomyelin phosphodiesterase 3, neutral [Mus musculus]
 gi|28422530|gb|AAH46980.1| Smpd3 protein [Mus musculus]
 gi|74226492|dbj|BAE23925.1| unnamed protein product [Mus musculus]
 gi|148679412|gb|EDL11359.1| sphingomyelin phosphodiesterase 3, neutral, isoform CRA_a [Mus
           musculus]
 gi|148679413|gb|EDL11360.1| sphingomyelin phosphodiesterase 3, neutral, isoform CRA_a [Mus
           musculus]
 gi|148679414|gb|EDL11361.1| sphingomyelin phosphodiesterase 3, neutral, isoform CRA_a [Mus
           musculus]
 gi|148679415|gb|EDL11362.1| sphingomyelin phosphodiesterase 3, neutral, isoform CRA_a [Mus
           musculus]
          Length = 655

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 78/303 (25%), Gaps = 75/303 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A AK+  +    +        +       +   +++ +    +   
Sbjct: 354 NLDFLCLQEVFDKRAAAKLKEQLHGYFEYILYDVGVYGCHGCCNFKCLNSGLFFASRYPV 413

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y       SF    ++ A+ L V++         +   +   L +         +
Sbjct: 414 MDV-AYHCYPNGCSFDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPP----EDSA 468

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +  +Q   L+DW+   ++S                VI GD N                  
Sbjct: 469 VRCEQLDLLQDWLADFRKSTSSTSTANPEELVVFDVICGDLNFDNCSSDDKLEQQHSLFT 528

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSR----------------CNANKNL 251
                              T+   + L                             +K+ 
Sbjct: 529 RYKDPCRLGPGEEKPWAIGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSP 588

Query: 252 ------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                        N   IDY +  +       +    E  +           L+DH P++
Sbjct: 589 GAGQKGRKDLLKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQL-----SGLTDHLPVA 643

Query: 300 IDY 302
           +  
Sbjct: 644 MRL 646


>gi|226503161|ref|NP_001147113.1| type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 [Zea mays]
 gi|195607324|gb|ACG25492.1| type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 [Zea mays]
 gi|223947803|gb|ACN27985.1| unknown [Zea mays]
          Length = 455

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 58/234 (24%), Gaps = 32/234 (13%)

Query: 100 NHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155
               R   +         + VR    R +++              GN+  V +   ++  
Sbjct: 180 GREYRCVVSKQMVGILLTVWVRSDLRRFVRRPSVSCVGCGVMGCLGNKGGVSVRFWLHDT 239

Query: 156 KIWVLDIHLKSFCFLDSLENTYSPS----CSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
               +  HL S        +  + +          +   L   + Q        ++ GD 
Sbjct: 240 SFCFVCCHLASGGREGDEAHRNANATEILSRTTFPRGHALNLPLPQNILDHDRVILLGDL 299

Query: 212 NRKINYLG----------------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
           N +I+                    ND     +    +   + +         K   N  
Sbjct: 300 NYRISLPEAKTRLLVERQDWKTLLENDQLRAEVCRGGAFQGWSEGPIGFSPTYKYHPNSD 359

Query: 256 PIDYFVMD-------QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              Y           + A  +  +  +      +        RLSDH P+   +
Sbjct: 360 AY-YGCATAARGRNKRRAPAWCDRVLWRGAGLAQTRYDRCESRLSDHRPVRAVF 412


>gi|332322157|emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 77/281 (27%), Gaps = 62/281 (22%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWNI  L                    + +R+     D  ++F+QE            
Sbjct: 3   LLSWNIRGLGA--------------KVKRSSIRKLIGKHDPHMIFIQETK--------LE 40

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
           K       S     N     S +   +   +      + ++ +  L              
Sbjct: 41  KICPMFMRSIWNENNIGVCFSPSQGSSGGLL-----SLWKKCFFELEEAKYDKNW---IM 92

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           +   +  +G K   ++I+                    L+ +AQ   +       S  P+
Sbjct: 93  LTGKILTSGFKCSFVNIYNPCD----------------LNDRAQVWLELAQLCISSESPY 136

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KEKDSRCNANKNLR--NKIPIDY 259
           ++ GDFN  ++          T   +            E           R  +K  +D 
Sbjct: 137 LLIGDFNEVLDPSDRGSQIVSTNGIHAFKSFVQVLELIEITPTTGKFTWFRGQSKSKLDR 196

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +                L+    I    + LSDHCPI +
Sbjct: 197 MFIHPQ----------WLDLFPTLQISLLKRTLSDHCPILV 227


>gi|325521811|gb|EGD00543.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. TJI49]
          Length = 132

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 36/142 (25%), Gaps = 28/142 (19%)

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTID 229
            +     ++A    D     + +  PF         +I GDFN                D
Sbjct: 2   DALRDRHREACAHADRPAPAENATGPFSATGQPRDAIICGDFNSAFGSDAYRRLLEPIDD 61

Query: 230 PNDSLIRFPKEKDSRC--------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
               +  +      R         +  +     +  D+  +       + +         
Sbjct: 62  APAFVDAWIARHPGRTQPPTAGVYDTAQWSDGPLACDFLFVTDTLLPRVARCEI------ 115

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
                    R SDH P+ ++ +
Sbjct: 116 -----DGDVRASDHQPVVLELN 132


>gi|126311234|ref|XP_001381377.1| PREDICTED: similar to synaptojanin 2 [Monodelphis domestica]
          Length = 1490

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/340 (15%), Positives = 93/340 (27%), Gaps = 68/340 (20%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQE 73
           ++VR+   +WN+N   +     L    +     D   L    +  D    ADI  V  +E
Sbjct: 528 KRVRIAMGTWNVNGGKQFRSNLLGTGELTDWLLDSPKLSGATEFQDDSSPADIFAVGFEE 587

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
           M   +A   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 588 MVELSAGNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIR 647

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        +AGN+ AV +  + +      +  HL +       ++          
Sbjct: 648 DVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAG------QSQVKERNEDYK 701

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR--- 236
           +  Q L   + +   S       GDFN +I+              WK +   D L     
Sbjct: 702 EITQKLSFPMGRSVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKS 761

Query: 237 ------FPKEKDSRCNANK-------------------------NLRNKIPIDYF----- 260
                    E                                    R K P+D       
Sbjct: 762 SGKIFKDFHEGTINFGPTYKYDVGSEAYDTSDKCRTPAWTDRVLWWRKKHPLDKTAGELN 821

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++D +       +                 + SDH P+  
Sbjct: 822 LLDNDLNVDSKIKHTW-SPGALMYYGRAELQASDHRPVLA 860


>gi|87120863|ref|ZP_01076755.1| exodeoxyribonuclease III [Marinomonas sp. MED121]
 gi|86163701|gb|EAQ64974.1| exodeoxyribonuclease III [Marinomonas sp. MED121]
          Length = 258

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/306 (9%), Positives = 81/306 (26%), Gaps = 76/306 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--AVA 81
           ++++S N+N + +      +               ++    DAD+V LQ++ +       
Sbjct: 1   MKVISLNVNGIRQAADRGFF---------------EWMIEQDADVVCLQDIQAEETSLND 45

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            VF    +  ++                    +A+  K +     +       D   R  
Sbjct: 46  NVFFPPGYNSYFFDSLTNP---------DVAGVAIYSKKMPKAIMTGIGFSDGDFEGRF- 95

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   ++ +  K+ +           +        +        +  K+ + + +  
Sbjct: 96  --------IQADFDKVSIASFLTPHGSNHEQELQDQKYAF------MEGFKNHLIKTRRK 141

Query: 202 LVPFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              F+  G  N   +                         +  + ++ +  F +      
Sbjct: 142 RREFIFCGTANVARSPIDVSSWFVNQRNSGFLPEERQWINEIFNEHEYIDAFRQINKQDK 201

Query: 246 NANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              +DY +      + +   S             + +R +DH P
Sbjct: 202 QYTWWPDYERAWKLDEGGRLDYQIATPGLKQVIRAGSV-----------YKDQRFADHAP 250

Query: 298 ISIDYD 303
           + ++YD
Sbjct: 251 LIMEYD 256


>gi|218459654|ref|ZP_03499745.1| Endonuclease/exonuclease/phosphatase [Rhizobium etli Kim 5]
          Length = 217

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 66/280 (23%), Gaps = 69/280 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
            RL+S+NI   +   G                 +        AD+V + E     + + +
Sbjct: 2   FRLMSFNIENDNFANG---------------PAIADMVIASGADVVNILEAEPLLSELPR 46

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     + +                        V  K   +  +         +      
Sbjct: 47  LLKTYPYYV------------GCGIGMEQCDTLVLSKRPLIEPR-------IRNLGLLWR 87

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
            R     ++ +G+K+  L  HL    +                 +   L + I       
Sbjct: 88  NRLTISTIDFDGRKVNFLAAHLTKPYYD-----------EFHGLEIADLAEVIPSLPG-- 134

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+AGDFN  I                          +            IPID+   
Sbjct: 135 -PLVLAGDFNTSILAPDVQSLMRSQ-------GLGTVSLEPATWPIAAGPFGIPIDHIFS 186

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   ++                    S+H  +  ++
Sbjct: 187 KAPLRLKSVRRIA-------------DSYGSNHFGLMAEF 213


>gi|147816006|emb|CAN72456.1| hypothetical protein VITISV_026051 [Vitis vinifera]
          Length = 1130

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  +     +           F + +D  + +    +      +   + +
Sbjct: 214 GDPWCVGGDFNVILAQGERSRQGRVTPAMRRFAQVMDDLELIDJPLQGGSFTWSGGLHNQ 273

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F++                 ++    K   + +SDH PI+I+
Sbjct: 274 AWARLDRFLVSP----------IWLDQFSNVTQKRLSRPISDHFPITIE 312


>gi|281203523|gb|EFA77723.1| RhoGAP domain-containing protein [Polysphondylium pallidum PN500]
          Length = 566

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 78/315 (24%), Gaps = 50/315 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           L +WN+N     E +  W                    L  DI  +  QE+        +
Sbjct: 126 LGTWNVNGKKPAESLDQWLCPGAGVEGGGLS-ASAGAALSPDIYAIGFQELDLTAEALLL 184

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                   W    +             +     I     VRK++   +      + A   
Sbjct: 185 GDTTRALPWEQAIAASLATQGEYVKLLSRQLVGILLFVYVRKEHRPHITHVLSDIAAVGI 244

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWI 195
               GN+  V +  +     I +++ HL +        N         L   A+    ++
Sbjct: 245 MGMMGNKGGVAVRFQFYNTSICIINSHLNAHMENILRRNQDMKDIARTLKFAAEDGSTFL 304

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPK 239
                        GD N +I                      D  +  +    +   F +
Sbjct: 305 NIF--DHDQLFWIGDLNYRIPLPDQEVRDKIIQKDFYSLFLADQLYLQMKSGAAFEGFQE 362

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
              S     K              R     D  +           E+   + Y   ++ S
Sbjct: 363 PPISFAPTYKYDPGTNDYDSSEKKRTPAWCDRILW----KTHKKAENVGILSYRRHELLS 418

Query: 288 RGKRLSDHCPISIDY 302
                SDH P+S  +
Sbjct: 419 -----SDHRPVSASF 428


>gi|227538192|ref|ZP_03968241.1| possible secreted protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241961|gb|EEI91976.1| possible secreted protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 289

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 71/247 (28%), Gaps = 40/247 (16%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             + +  + ++++S N+                  T  D+  +  Y K    D++FL+++
Sbjct: 45  SGSNAPTKTLKVMSVNMR---------------LSTIPDFATMITYIKEYSPDLLFLRQI 89

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            S     +   +    +  S    +   K           AV  K     + +  L   +
Sbjct: 90  DSATTRVEKVNRP-QVMADSLGMEVFFKKNFDYQTGGFGNAVLSKFPIKEKVAQILR--R 146

Query: 135 DSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
           +  + A  R AV + VE+     ++     L      +             + Q   L  
Sbjct: 147 EDGNTAELRSAVMIRVEVEKDHDVYFAGTELDPSVVNN------------RNLQVVDL-- 192

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            +   ++   P ++ G+FN             + +        F          +     
Sbjct: 193 -LNMTEKITEPVILVGNFN------EQESANGQVLSYLKGSFTFACLGAGCPMNSPKASP 245

Query: 254 KIPIDYF 260
               DY 
Sbjct: 246 TGIYDYI 252


>gi|302562125|ref|ZP_07314467.1| membrane protein [Streptomyces griseoflavus Tu4000]
 gi|302479743|gb|EFL42836.1| membrane protein [Streptomyces griseoflavus Tu4000]
          Length = 301

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/292 (11%), Positives = 67/292 (22%), Gaps = 66/292 (22%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            L+P   +  + + +V  N+                    +D     +       D++ L
Sbjct: 74  LLLPDAGAGPRDLVVVQHNV----------------SDENTDPAGTARALSGARPDLIAL 117

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+                     E+ +              +  +     V        
Sbjct: 118 QEV-------------VPPALAVYEKTLAADYPYHAVLGTVGLWSKHPLTGVRPLDIKPR 164

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
           G  +S++R      +  +      +  VL  HL S         +     S     A  L
Sbjct: 165 GITESWNR-----GLRAVAGTPHGEAAVLVAHLPSVRVGAGGLASSRRDES-----AGLL 214

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
            + +    E L   ++ GD N   +  G      +                         
Sbjct: 215 GEAVA--AEPLETVILLGDLNGTADDRGLAPLTSRMGVAERGFALSFPAAL--------- 263

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID  +        +     +                SDH P++    
Sbjct: 264 -PVARIDQVMARSATVAHIRTLPAT---------------GSDHLPVAARVT 299


>gi|170571982|ref|XP_001891940.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
 gi|158603256|gb|EDP39251.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
          Length = 1016

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 82/309 (26%), Gaps = 49/309 (15%)

Query: 23  KVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSY 77
            + + +WN+N     S+    +    +       +  L     +   DI  + L+E+   
Sbjct: 519 TIWVGTWNVNGGKNFSDIAFRNQTNLADWLFPQHFPGLSGD-NSTTPDIYVIGLEEIIDL 577

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           NA              S          +    +   + ++      ++            
Sbjct: 578 NASNIRAWALGLREALSKRNKYILLGCEQLVGVCIFVFIKPSLATAVRDMSINSVKTGMG 637

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              GN+ +V + + I       +  H  +       +N             + +K    +
Sbjct: 638 GATGNKGSVAMSLTIYSTTFCFVCSHFAAG------QNEIRDRNEDYMNTLRKIKFSQGR 691

Query: 198 KKESLVPFVIAGDFNRKI----------------NYLGNNDDFWKTIDPNDSLIRFPKEK 241
              S +     GDFN ++                  L   D   +     +    F +  
Sbjct: 692 SILSHIVVFWLGDFNYRLVLSRNEAEAAIKSGNITELSRYDQLSQQKALGEIFKDFKEGP 751

Query: 242 DSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +     K                    D  +  +   + ++      + Y+  ++K+  
Sbjct: 752 LTFAPTYKYDTFTDDYDTSEKCRVPAWTDRILWSETNGEKIV----HLLNYDRIELKT-- 805

Query: 290 KRLSDHCPI 298
              SDH P+
Sbjct: 806 ---SDHRPV 811


>gi|149191217|ref|ZP_01869474.1| hypothetical protein VSAK1_15297 [Vibrio shilonii AK1]
 gi|148834966|gb|EDL51946.1| hypothetical protein VSAK1_15297 [Vibrio shilonii AK1]
          Length = 254

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 87/309 (28%), Gaps = 65/309 (21%)

Query: 2   IRKYVLALVFFLVPCTASV--------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53
           +   VL+++  ++  T              V ++ +N    +                  
Sbjct: 1   MMAAVLSVISLVLFGTKPQFITSDGCDENYVSVMQYNTYYDN----------------QQ 44

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
                 + +    DI+ LQE+   +       K+ +   Y  +R + +          + 
Sbjct: 45  LGNFIDFVRERRPDILVLQEVSPQHGEQLKLLKDLYPYQYGGQRRVGYP---------SG 95

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             +  +       +   +   +          ++++   + ++   L          + L
Sbjct: 96  QMILSRAPLYGMNTTTSISGHN---------IIQVVWRASNERDLFLIAAHPPSPRSELL 146

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
               +     +   AQ            L   ++ GDFN           F K +   D 
Sbjct: 147 WRERNEVIEDVVDMAQA---------SPLDVTIVVGDFN----LASTTKRFNKILPSFDK 193

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                  K  +  +       + ID+F +        +  S + I + E     +  + S
Sbjct: 194 QPVASWPKFIKRWS-IPFVPVVAIDHFWI------RRVGGSQNTICFRESL---KQIQGS 243

Query: 294 DHCPISIDY 302
           DH P+   +
Sbjct: 244 DHVPVETRF 252


>gi|260902934|ref|ZP_05911329.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308107867|gb|EFO45407.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus AQ4037]
          Length = 313

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 77/305 (25%), Gaps = 67/305 (21%)

Query: 5   YVLALVFFLV-----PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           +V  L   L+        AS +Q + ++ +N+   +                 D      
Sbjct: 64  FVAILFVLLLVPPQRSHVASCSQSLSVIQFNLFYENS----------------DINQFIN 107

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           Y     AD+V +QE+            + +  +Y  +R + +            + +  +
Sbjct: 108 YLLRHPADLVVMQELTPRVGSLLHMLDDVYPHYYGGQRDVGYPSN---------LMILSR 158

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +       Y     ++            + +      I +   H  S             
Sbjct: 159 HPITEVSVYRAPNGQE--------VIRAVWLPKGQAPITLFAAHPPSPRT---------- 200

Query: 180 SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
               L  Q   L   I            ++ GDFN   +        + +          
Sbjct: 201 --RELWHQRNALVRTIETLTALYPEPEVLVVGDFNLS-SVSPRFSTLFPSFQTAPVTSWP 257

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              K      N      I ID+  +     + +I               S   + SDH  
Sbjct: 258 TNIK----GINVPEPMMIGIDHLWLKSEQGQRIICA----------RESSALPQGSDHRM 303

Query: 298 ISIDY 302
           ++   
Sbjct: 304 VTTQI 308


>gi|322831641|ref|YP_004211668.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602]
 gi|321166842|gb|ADW72541.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602]
          Length = 266

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 87/295 (29%), Gaps = 73/295 (24%)

Query: 14  VPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
           +P  A++     +R++ WNI                ++     ++LR Y K  DA +V L
Sbjct: 31  LPPGAALPNSNILRVMVWNIF--------------KQQRADWLSVLRDYGK--DAQLVLL 74

Query: 72  QEMGSYNAVAKVFPKNT----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           QE  +   + +    N         +   +  +     S         +R++   +    
Sbjct: 75  QEAQTTPELIRYATSNYLAADQVPAFMLPQHPSGVMTLSAAHPVYCCPLREREPLLRLSK 134

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             L               V +   ++G+ + V++IH  +F     + +            
Sbjct: 135 SAL---------------VTVYPLVDGRLLMVVNIHAVNFSIGIDVYS------------ 167

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + L     Q      P ++AGDFN       +            ++        S    
Sbjct: 168 -KQLDPIGEQIANHKGPVIMAGDFN-----AWSKQRINALFGFAGNIHLEEVRFPSD--- 218

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +      P+D+                     +         R SDH P+ +++
Sbjct: 219 YRKRAFGRPLDFIFYRD---------------LSVTSASVMETRASDHNPLRVEF 258


>gi|229489182|ref|ZP_04383048.1| endonuclease/exonuclease/phosphatase [Rhodococcus erythropolis
           SK121]
 gi|229324686|gb|EEN90441.1| endonuclease/exonuclease/phosphatase [Rhodococcus erythropolis
           SK121]
          Length = 331

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 73/312 (23%), Gaps = 77/312 (24%)

Query: 6   VLALVFFLVPCTA-----------SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
           +L L  F    +            +    +R++  N+                    +D 
Sbjct: 81  ILVLGLFGWSVSPLYVGGTEEPMSAAGPSIRIMQANL----------------MVGAADP 124

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             L    +  + D+V +QE+    A A                +++H       D     
Sbjct: 125 ESLVAMVREREVDVVTVQELTYQEADALEAAGLD--------EVLSHQFLVPYTDGGGGA 176

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            +  +      +S      +   +      A  + +               ++    S+ 
Sbjct: 177 GIYSRFPLSNPRSLDGFSPETLSTELNVGLAQPVTL--------FAVHPAPAYISPASVW 228

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                           L  ++ +        +++GDFN   +        ++ +  N   
Sbjct: 229 ADEQR----------RLGSYMDKVAGRDN-VIVSGDFNASYSNKQ-----FRNLLTNGYT 272

Query: 235 IRFPKEKDSRCNANKNL-RNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
               +             R      ID+ +        L +                   
Sbjct: 273 SAADQLGSGLIPTYPTDKRYPAVVGIDHIITKGAVATSLERIEIE--------------- 317

Query: 292 LSDHCPISIDYD 303
            SDH  +  D  
Sbjct: 318 GSDHHGLIADIT 329


>gi|148905748|gb|ABR16038.1| unknown [Picea sitchensis]
          Length = 606

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 88/281 (31%), Gaps = 28/281 (9%)

Query: 19  SVAQKVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                V   ++NI            S          S    +        + ++ LQE  
Sbjct: 127 PAENSVSCTTFNILAPIYKRINGEDSRESQFRDYWVSRNESILDMLLLERSSVICLQEFW 186

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             N   ++          +   +    + ++  D     AVRK + +V+ Q   L     
Sbjct: 187 VRN--EELVEMYEQKFHDAGYEIYKLGRTNNRGDGLFT-AVRKDHFKVVNQRELL----- 238

Query: 136 SFSRAGNRRAVELLV---------EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
            F   G+R A  L +         E+ G     L ++       +S           + +
Sbjct: 239 -FHDFGDRVAQLLHLRSVIPSLQSEMGGVPFEALVVNTHLLFPHNSNYCLIR--LRQVYK 295

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             ++L+ +        +P ++ GD+N             +    +        + D   +
Sbjct: 296 ILEYLEAFKADYNLPPIPVILCGDWNGSKRGQVYKFLRSQGFVSSYDAAHNYSDNDKDAH 355

Query: 247 ANKNLRN-KIPI---DYFV-MDQNAYKFLIQESFSEILYNE 282
              + RN +  I   D+   ++ N ++ L++ S+ E ++  
Sbjct: 356 KWISHRNHRGNICGVDFIWLLNPNKHRKLLRTSWMEAVFGI 396


>gi|169634472|ref|YP_001708208.1| hypothetical protein ABSDF3084 [Acinetobacter baumannii SDF]
 gi|169153264|emb|CAP02367.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii]
          Length = 373

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/251 (10%), Positives = 63/251 (25%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL ++ + L  D++   E  +            W             +     D  
Sbjct: 114 DKYHLLLEHVRTLKPDLLLTLESDTT-----------WENALKEIEKDYPYRVPVPLDNL 162

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   +L  +              ++  +G  + +  +H K     +
Sbjct: 163 YGMHLYSRLPLKNTEVKFILSNEIPSIHT-------TVILRSGMPVQLYCLHPKPPSPTE 215

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++T   +          L     Q K+     ++ GD N            ++ I   
Sbjct: 216 AKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS-- 262

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +    ++     
Sbjct: 263 GLLDPRVGRHFINTFHADYPLLRWSLDHIFHS--------------TDFGLVKMQRLSHI 308

Query: 292 LSDHCPISIDY 302
            SDH P+ +  
Sbjct: 309 GSDHFPVYVVL 319


>gi|169797320|ref|YP_001715113.1| hypothetical protein ABAYE3347 [Acinetobacter baumannii AYE]
 gi|215484757|ref|YP_002326992.1| Endonuclease/Exonuclease/phosphatase family protein [Acinetobacter
           baumannii AB307-0294]
 gi|239500840|ref|ZP_04660150.1| Endonuclease/Exonuclease/phosphatase family protein [Acinetobacter
           baumannii AB900]
 gi|301346423|ref|ZP_07227164.1| Endonuclease/Exonuclease/phosphatase family protein [Acinetobacter
           baumannii AB056]
 gi|301511749|ref|ZP_07236986.1| Endonuclease/Exonuclease/phosphatase family protein [Acinetobacter
           baumannii AB058]
 gi|301594292|ref|ZP_07239300.1| Endonuclease/Exonuclease/phosphatase family protein [Acinetobacter
           baumannii AB059]
 gi|332852981|ref|ZP_08434491.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013150]
 gi|332866415|ref|ZP_08436999.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013113]
 gi|169150247|emb|CAM88143.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii AYE]
 gi|213986519|gb|ACJ56818.1| Endonuclease/Exonuclease/phosphatase family protein [Acinetobacter
           baumannii AB307-0294]
 gi|332728917|gb|EGJ60272.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013150]
 gi|332734641|gb|EGJ65747.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6013113]
          Length = 373

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/251 (10%), Positives = 63/251 (25%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL ++ + L  D++   E  +            W             +     D  
Sbjct: 114 DKYHLLLEHVRTLKPDLLLTLESDTT-----------WENALKEIEKDYPYRVPVPLDNL 162

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   +L  +              ++  +G  + +  +H K     +
Sbjct: 163 YGMHLYSRLPLKNTEVKFILSNEIPSIHT-------TVILRSGMPVQLYCLHPKPPSPTE 215

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++T   +          L     Q K+     ++ GD N            ++ I   
Sbjct: 216 AKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS-- 262

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +    ++     
Sbjct: 263 GLLDPRVGRHFINTFHADYPLLRWSLDHIFHS--------------TDFGLVKMQRLSHI 308

Query: 292 LSDHCPISIDY 302
            SDH P+ +  
Sbjct: 309 GSDHFPVYVVL 319


>gi|74025124|ref|XP_829128.1| DNA-(apurinic or apyrimidinic site) lyase [Trypanosoma brucei
           TREU927]
 gi|70834514|gb|EAN80016.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Trypanosoma
           brucei]
 gi|261335080|emb|CBH18074.1| DNA-(apurinic or apyrimidinic site) lyase,putative [Trypanosoma
           brucei gambiense DAL972]
          Length = 572

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 33/213 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L+SWN+         + W ++ +   SD+  + ++ ++  ADIV LQE+       K  P
Sbjct: 3   LISWNV---------AGWGSTARLIRSDFGTIAEFLRHTQADIVCLQEVKGSWQKLKDEP 53

Query: 86  KNT------------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                          W  F+S                   +     +   ++       +
Sbjct: 54  YAMGAGDGRPVSVEGWESFWSFSGRGQRGFNGVATFARKGLTWWCDSRPFIEADDKEGNS 113

Query: 134 KDSFSRAGNRRAVEL-----LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
               S        EL     ++        +++ ++ +        +             
Sbjct: 114 SPDASDKKTSTVEELHDEGRVLVTGHSAFVLVNTYVVNG-----RNSQRMAFKMRFLSCL 168

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           + L   +   KE+  P ++ GD N       ++
Sbjct: 169 KSLLARLK--KENGKPVILVGDLNITFRAEDSH 199


>gi|58262048|ref|XP_568434.1| hypothetical protein CNM02360 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134118579|ref|XP_772063.1| hypothetical protein CNBM2200 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254669|gb|EAL17416.1| hypothetical protein CNBM2200 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230607|gb|AAW46917.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
          Length = 527

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/215 (11%), Positives = 63/215 (29%), Gaps = 16/215 (7%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT-LLRQYAKNLDADIVFLQEMGSY 77
           S  ++ ++++WN+   +         +   R       LL ++A +  +DI+ LQE    
Sbjct: 84  SQGKRAKIITWNLLAQTLVRRELFPGSDCLRWADRKPMLLAEFAHHSSSDIICLQECDK- 142

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
             +    P      +                        + K + +  +      +    
Sbjct: 143 --LPDFLPALPQHAYIKGTGPGKLHGLVVLYRKDRFSLRQSKLIHLDFEEIHPRSSDLVI 200

Query: 138 SRAGNRRAVELLVEINGKKIW-----VLDIHLKSFCFL---DSLENTYSPSCSLLSQQ-- 187
              G     E+     G +       ++ +  K    +    +    +        +Q  
Sbjct: 201 REDGAESLEEVRRRRGGSRQTKNVGLIVALECKDGEGVIIATTHLFWHPKFVYERVRQTL 260

Query: 188 --AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
              + ++ +      +  P V+AGD N + +    
Sbjct: 261 LLVRAIRRFQKANCCTTWPVVLAGDLNTQPSEATY 295


>gi|311258908|ref|XP_003127842.1| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase-like
           [Sus scrofa]
          Length = 913

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 78/314 (24%), Gaps = 61/314 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           + ++N+N  S +E +  W             L    +  D   V  QE+           
Sbjct: 269 VGTYNVNGQSPKECLQPW-------------LSHGVQAPDVYCVGFQELDLSKEAFFFHD 315

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFS 138
              +  W    S                   I     V++++   + +            
Sbjct: 316 TPKEEEWFKAVSEGLYPGTKYAKVKLIRLVGIMLLLYVKQEHAEYISEVEAETVGTGIMG 375

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R GN+  V +    +   I V++ HL +        N          Q  Q         
Sbjct: 376 RMGNKGGVAIRFRFHNTSICVVNSHLAAHTEEYERRNQDYKDICSRMQFCQVDPSLPPLT 435

Query: 199 KESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEK 241
                  +  GD N +I  L                    D     +        F + +
Sbjct: 436 INKHDVILWLGDLNYRIEELDVEKVKKLIEEKAFQTLYAYDQLRAQVAAKAVFEGFSEGE 495

Query: 242 DSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +     K              R     D  +           ++ +++ Y         
Sbjct: 496 LTFQPTYKYDTGSDDWDTSEKCRAPAWCDRVLW--------KGKNITQLSYQSH----MA 543

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+S  +D
Sbjct: 544 LKTSDHKPVSSVFD 557


>gi|294951933|ref|XP_002787171.1| hypothetical protein Pmar_PMAR007863 [Perkinsus marinus ATCC 50983]
 gi|239901875|gb|EER18967.1| hypothetical protein Pmar_PMAR007863 [Perkinsus marinus ATCC 50983]
          Length = 587

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 83/299 (27%), Gaps = 46/299 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+              S+ R       +    ++   DI+ +QE       A++
Sbjct: 310 LRVGTWNVWF-----SKKSPSQSLCRQEEVRKFVCGVYEDGWPDILMVQESNLSAHRAQI 364

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                 C F++  R   +     +    T I V  +   V +        ++      +R
Sbjct: 365 ------CYFHTHLRRFEYLTGYKSQVHDTGILVNCEKFSVAR-----PVPEELLMTVKDR 413

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL--SQQAQW-----LKDWIT 196
                   I   ++      +           +   +CS      QA       L     
Sbjct: 414 LVKAHCGAIPHGQLATALSRICVVELEHEKMQSRFFACSFHATRHQANACSSAVLLFLQE 473

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
               + +P ++ GDFN          D    +D N  L            + K  R K  
Sbjct: 474 LSDATRIPVLVGGDFNC---------DIVDLLDGNPDLDNALAGLTVAEYSYKRHRFKGN 524

Query: 256 ---PIDYFVMDQNAYKF--------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ID   +               +   SF E L+ +D          DH P+     
Sbjct: 525 RDKLIDRLAVINPRSNREFDLKLHSVAACSFEESLFVDDHEPGVRVF--DHLPVMGQLS 581


>gi|126325263|ref|XP_001366154.1| PREDICTED: similar to synaptojanin 1 isoform 2 [Monodelphis
           domestica]
          Length = 1588

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 95/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-----DI--V 69
           +  +K+R+   +WN+N   +   ++    ++     +  +L    +  D      DI  +
Sbjct: 528 TEPKKIRVCIGTWNVNGGKQFRSIAFKNQTLTDWLLETPVLTSIQELQDQRDKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNV 121
             +EM   NA   V      +  W +        +       ++        + +R ++ 
Sbjct: 588 GFEEMVELNAGNIVSASTTNQKLWAVELQKILSRDRKYVLLASEQLVGICLYVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVGFDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARRLSFPMGRMLLSHDYVFWCGDFNYRIDLPNEEVRELIKHQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKITFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       +S     +N   +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDDSKVLYTWNPGTLLHYGRAELKTSDHRPVVALID 867


>gi|126325261|ref|XP_001366094.1| PREDICTED: similar to synaptojanin 1 isoform 1 [Monodelphis
           domestica]
          Length = 1299

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 95/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-----DI--V 69
           +  +K+R+   +WN+N   +   ++    ++     +  +L    +  D      DI  +
Sbjct: 528 TEPKKIRVCIGTWNVNGGKQFRSIAFKNQTLTDWLLETPVLTSIQELQDQRDKPTDIFAI 587

Query: 70  FLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNV 121
             +EM   NA   V      +  W +        +       ++        + +R ++ 
Sbjct: 588 GFEEMVELNAGNIVSASTTNQKLWAVELQKILSRDRKYVLLASEQLVGICLYVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +       ++      
Sbjct: 648 PFIRDVGFDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------QSQVKERN 701

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 702 EDFVEIARRLSFPMGRMLLSHDYVFWCGDFNYRIDLPNEEVRELIKHQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKITFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       +S     +N   +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDDSKVLYTWNPGTLLHYGRAELKTSDHRPVVALID 867


>gi|184156758|ref|YP_001845097.1| hypothetical protein ACICU_00438 [Acinetobacter baumannii ACICU]
 gi|260556208|ref|ZP_05828427.1| endonuclease/Exonuclease/phosphatase [Acinetobacter baumannii ATCC
           19606]
 gi|332873170|ref|ZP_08441127.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6014059]
 gi|183208352|gb|ACC55750.1| uncharacterized protein conserved in bacteria [Acinetobacter
           baumannii ACICU]
 gi|193076249|gb|ABO10883.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
 gi|260410263|gb|EEX03562.1| endonuclease/Exonuclease/phosphatase [Acinetobacter baumannii ATCC
           19606]
 gi|322506650|gb|ADX02104.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
 gi|323516525|gb|ADX90906.1| hypothetical protein ABTW07_0469 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332738682|gb|EGJ69552.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter
           baumannii 6014059]
          Length = 373

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/251 (10%), Positives = 63/251 (25%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL ++ + L  D++   E  +            W             +     D  
Sbjct: 114 DKYHLLLEHVRTLKPDLLLTLESDTT-----------WENALKEIEKDYPYRVPVPLDNL 162

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   +L  +              ++  +G  + +  +H K     +
Sbjct: 163 YGMHLYSRLPLKNTEVKFILSNEIPSIHT-------TVILRSGMPVQLYCLHPKPPSPTE 215

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++T   +          L     Q K+     ++ GD N            ++ I   
Sbjct: 216 AKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS-- 262

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +    ++     
Sbjct: 263 GLLDPRVGRHFINTFHADYPLLRWSLDHIFHS--------------TDFGLVKMQRLSHI 308

Query: 292 LSDHCPISIDY 302
            SDH P+ +  
Sbjct: 309 GSDHFPVYVVL 319


>gi|293392720|ref|ZP_06637039.1| endonuclease/exonuclease/phosphatase [Serratia odorifera DSM 4582]
 gi|291424837|gb|EFE98047.1| endonuclease/exonuclease/phosphatase [Serratia odorifera DSM 4582]
          Length = 257

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 71/288 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             A  +R++ WNI                K+  +D+  + +     DA +V LQE  +  
Sbjct: 28  PTAGALRVMVWNIF---------------KQQRADWLSVLKSFGK-DAQLVLLQEAQTTP 71

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +                         ++      +      V  L  ++P+        
Sbjct: 72  EL---------------VSFATTHYLAADQVPAFVLPQHPSGVMTLAAAHPVYCCPLRER 116

Query: 139 RAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R A   L+ +    NG+ + V++IH  +F     + +             + L   
Sbjct: 117 EPLLRLAKSALITVYPLYNGQLLMVVNIHAVNFSLGVDVYS-------------KQLGPI 163

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             Q      P ++AGDFN         +  ++                   + ++     
Sbjct: 164 GEQIANHHGPVIMAGDFNAW--SRKRINALYQFASDMALREVNF------TDDHRRKAFG 215

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            P+D+          +++ S                + SDH P+ +++
Sbjct: 216 RPLDFVFYRN---LGVVEASVLVT------------QASDHNPLLVEF 248


>gi|47225502|emb|CAG11985.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 562

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/297 (10%), Positives = 76/297 (25%), Gaps = 64/297 (21%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-----KRDSNNDIHTAIAVRKK 119
           + D++ L+E+    A  K+         +    +  ++             ++ + +  +
Sbjct: 270 NVDMLCLEEVFDKRAAEKLTRALKPVFGHILYDVGVYACQPLCGCTHFKFFNSGLFLASR 329

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
              +  Q Y              +  +   V I   +     +   +   L + E     
Sbjct: 330 FPVLEAQ-YHFFPNSKGEDALAAKGLLATKVLIGENRDKKKVVGYFNCTHLHAPEGEGEV 388

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPF---VIAGDFNRKINYLGNNDD------------- 223
            C  L    +W+ D+    ++        V+ GDFN       +  +             
Sbjct: 389 RCEQLDMVIKWIGDFQAANRQPDEEVAFDVLCGDFNFDNCSPDDTKEQNHRIFEDYRDPC 448

Query: 224 -------------------------------FWKTIDPNDSLIRFPKEKDSRCNA---NK 249
                                            +T++  D    +        N+     
Sbjct: 449 RAGPGREKPWVIGTLLDQPTLYEDDVNNPESLQRTLEREDQRKMYISHPIPAENSPLVYP 508

Query: 250 NLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     IDY +   ++     +    E+ +           L+DH P+ +  +
Sbjct: 509 ETDQPWIGRRIDYILYRDSSVSKHWRTEIEEVTFITHLA-----GLTDHIPVGLRLN 560


>gi|161504022|ref|YP_001571134.1| hypothetical protein SARI_02115 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865369|gb|ABX21992.1| hypothetical protein SARI_02115 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 97

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 27/112 (24%), Gaps = 18/112 (16%)

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L  W+        P ++AGDFN               +        F +           
Sbjct: 2   LAGWVNA-LPESEPVLVAGDFNDWRQRANP------PLKAAGLEEIFTRAHGRPARTFPV 54

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +D   +                           + LSDH P+S + 
Sbjct: 55  SMPLLRLDRIYVKNANASS-----------PTALPLRNWRHLSDHAPLSAEI 95


>gi|332245376|ref|XP_003271839.1| PREDICTED: LOW QUALITY PROTEIN: synaptojanin-2-like [Nomascus
           leucogenys]
          Length = 1468

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 92/340 (27%), Gaps = 68/340 (20%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQE 73
           +++R+   +WN+N   +     L    +     D   L    ++ D    ADI  V  +E
Sbjct: 528 KRIRIAMGTWNVNGGKQFRSNLLRTAELTDWLLDSPQLSGATESQDDSSPADIFAVGFEE 587

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
           M   +A   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 588 MVELSAGNIVNASTTNKKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIR 647

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        +AGN+ AV +  + +      +  HL +       ++          
Sbjct: 648 DVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAG------QSQVKERNEDYK 701

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR--- 236
           +  Q L   + +   S       GDFN +I+              WK +   D L     
Sbjct: 702 EITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKS 761

Query: 237 ------FPKEKDSRCNANK-------------------------NLRNKIPIDYF----- 260
                    E                                    R K P D       
Sbjct: 762 SGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGELN 821

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++D +                         + SDH P+  
Sbjct: 822 LLDSDLDVDTKVRHTW-SPGALQYYGRAELQASDHRPVLA 860


>gi|329956455|ref|ZP_08297052.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
 gi|328524352|gb|EGF51422.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
          Length = 372

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/338 (8%), Positives = 70/338 (20%), Gaps = 78/338 (23%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +  ++ WNI     +                Y  +      L  D V   E+ +YN    
Sbjct: 54  EFTVLQWNIWQEGTKVPGG------------YDAIVNEIVRLKPDFVTFSEVRNYNNTR- 100

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                         + +        +       +  ++      +               
Sbjct: 101 --------FCDRIVQSLKEKGETYYSFYSYDSGLLSRHPITDSLTVFPEKDDHGSIYKMT 152

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP------------SCSLLSQQAQW 190
            +     + +    +  L+    +    D       P              SL     + 
Sbjct: 153 SKIKGHKIAVYTAHLDYLNDAYYNVRGYDGSTWDEIPIPQTVLEVLKVNDASLRDDAIKE 212

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNND-------------DFWKTIDPNDSLIRF 237
                 +        ++ GDFN   +     +                  +  N+  I  
Sbjct: 213 FIAAARKDIAEGTIVILGGDFNEPSHLDWIRETKDLYDHNGLIIPWTVPLMLDNNGFIDT 272

Query: 238 PKEKDSRCNANKNLRNKI--------------------PIDYFVMDQNAYKFLIQESF-- 275
            +       +                             IDY     +    L       
Sbjct: 273 YRTLYPDVLSYPGFTFPADNPLIPVEKLTWTPKSDERDRIDYVFYYPHPAIQLKAAVIFG 332

Query: 276 ----------SEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     ++    ++ +  +G   +DH  + + +D
Sbjct: 333 PQGSIVKSQRTQEKSKDNFLLPQGVWPTDHKGLFVTFD 370


>gi|167836386|ref|ZP_02463269.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia thailandensis MSMB43]
          Length = 128

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 26/106 (24%), Gaps = 19/106 (17%)

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF--------PKEKDSRCNANKNLRNKIPI 257
           ++ GDFN                D    +  +        P       +  +     +  
Sbjct: 32  IVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTAQWHEGPMTC 91

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+  +       + +                  R SDH PI ++  
Sbjct: 92  DFVFVTDTLAHRISRCEI-----------DGAVRASDHQPIVLELS 126


>gi|90413317|ref|ZP_01221311.1| hypothetical protein P3TCK_17119 [Photobacterium profundum 3TCK]
 gi|90325718|gb|EAS42181.1| hypothetical protein P3TCK_17119 [Photobacterium profundum 3TCK]
          Length = 357

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/355 (10%), Positives = 83/355 (23%), Gaps = 91/355 (25%)

Query: 35  SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94
           SE     + K +       ++ L    +++ +D++ L E               +   Y 
Sbjct: 2   SEPVSGQILKQTANAENKRFSKLAAIIQSVRSDVLLLCEFDHPGDGGDDGAVANFRRHYL 61

Query: 95  TERLINHSK----------------------------------RDSNNDIHTAIAVRKKN 120
                   +                                      +  H +  +  + 
Sbjct: 62  AVPQHGQDEIDYPYQYCPPSNTGLLSPFDLNGDGVISLPEDGVGFGEHHGHFSFVILSRY 121

Query: 121 VR----------VLQQSYPLLGAKDSFS--------RAGNRRAVELLVEINGKKIWVLDI 162
                       +L +  P     + F         R  ++  V + +E+N + I +L  
Sbjct: 122 PIQVDQIRSWQHLLWRDMPAHCMPEGFYSEQAQSVLRLSSKNHVVVPIEVNNQVIHLLCC 181

Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ------------KKESLVPFVIAGD 210
           H     F          +      + + + D I                     FV+ GD
Sbjct: 182 HPTPPVFDGEE----KRNACRNHDELRLVTDIINNADYLVDDNGKNGGLSKGDSFVVLGD 237

Query: 211 FNRKINYLGNNDDFWKTI------DPNDSLIRFPKEKDSRCNANKNLRNKIP-------- 256
            N             +++      + + S      +                        
Sbjct: 238 LNADSADGDGIKGTIQSLIYHSRINRSVSAGTLTPKSLGGRFHRPWQPRSGRSNEWTHLS 297

Query: 257 ---IDYFVMDQNAYKFLIQESFSE------ILYNEDDIKSRGKRLSDHCPISIDY 302
              +DY +   +         + +       L   +  K R +  SDH  + ID 
Sbjct: 298 GLRLDYVLPSVDLSVKQTGVFWPDKKDPLRHLITNEKGKERAQDGSDHRLVWIDL 352


>gi|50955044|ref|YP_062332.1| hypothetical protein Lxx14090 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951526|gb|AAT89227.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 277

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 47/213 (22%), Gaps = 51/213 (23%)

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY------------- 177
           +   D    A  R A    +  NG  +    +HL++      L                 
Sbjct: 71  IDLPDPLGGAERRLAT-ATIPCNGLPLRFTSLHLRNTERAGRLGLDRDYRAAGAGRLPLD 129

Query: 178 -------SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230
                    S  +  +Q   +++ +        P ++ GD N   + L         +  
Sbjct: 130 GVRDDGIRRSVEIRLEQLAAVEERLGAW--PGQPHILTGDLNFLPDGLEYRRIIGWGLAD 187

Query: 231 NDSL--------------------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
                                    R   E+ +             +DY           
Sbjct: 188 AWRAAPRLGSGATILERNPLVGDGPRAYAEQAAPLLPGSTGDLDYTLDYQFHSPGLRPGA 247

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        D    G   SDH    +DY 
Sbjct: 248 AW--------TLSDPGRDGAWPSDHLGHVVDYT 272


>gi|327276495|ref|XP_003223005.1| PREDICTED: sphingomyelin phosphodiesterase 3-like [Anolis
           carolinensis]
          Length = 662

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 82/303 (27%), Gaps = 75/303 (24%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A  K+  +      Y    +  +S     +   +++ +    +   
Sbjct: 361 NLDFLCLQEVFDKRAAEKLKDQLHHYFEYILYDVGVYSCHGHCTFKFVNSGLLFASRYPV 420

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +    +     K + S + ++ A+ L V++         +   S   L +L        +
Sbjct: 421 MDAAYHCYPNGKGTDSLS-SKGALFLKVQVGSTPQDQRIVGYISCTHLQALAGDT----T 475

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLG----------- 219
           +  +Q   L+DW+   ++S                V+ GD N                  
Sbjct: 476 VRCEQLDLLQDWLADFRKSTSSSSTANPEELVAFDVLCGDLNFDNCSSDDKLEQQHSLFT 535

Query: 220 ------------NNDDFWKTIDPNDSLIRFPKEKDSR----------------CNANKNL 251
                       +      T+   + L                             +K+ 
Sbjct: 536 RYKDPCRIGPGEDKSWAIGTLLDPEGLYDEEVCTPDNLQKTMESEDGRKAFLVFPTSKSH 595

Query: 252 ------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                        N   IDY +  +       +    E  +           L+DH P++
Sbjct: 596 ASSQKGRKGALKGNGRRIDYMLYAEEGLYLEWKVEVEEFSFITQLA-----GLTDHLPVA 650

Query: 300 IDY 302
           +  
Sbjct: 651 MRL 653


>gi|332808485|ref|XP_513330.3| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase
           isoform 2 [Pan troglodytes]
          Length = 913

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 61/314 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           + ++N+N  S +E + LW             L    +  D   V  QE+           
Sbjct: 269 VGTYNVNGQSPKECLQLW-------------LSNGIQAPDVYCVGFQELDLSKEAFFFHD 315

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFS 138
              +  W    S     +             I     V++++   + +            
Sbjct: 316 TPKEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMG 375

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R GN+  V +  + +   I V++ HL +        N          Q  Q         
Sbjct: 376 RMGNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLT 435

Query: 199 KESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEK 241
             +    +  GD N +I  L                    D     +        F + +
Sbjct: 436 ISNHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEDFTEGE 495

Query: 242 DSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +     K              R     D  +           ++ +++ Y         
Sbjct: 496 LTFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MA 543

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+S  +D
Sbjct: 544 LKTSDHKPVSSVFD 557


>gi|298283547|gb|ADI72893.1| DNA lyase [Ophiocordyceps unilateralis]
          Length = 227

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 69/216 (31%), Gaps = 30/216 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
           K+RL +WN+N +        W      T   ++ +    +    DIV +QE  +   +  
Sbjct: 6   KMRLTTWNVNGIRNPFSYQPWN-----TARSFSAMFDILET---DIVVMQELKIQRKDLK 57

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--------VRVLQQSYPLLG 132
             +   + W  ++S   L  H K  S   I+T  A             V       P   
Sbjct: 58  DDMVLVDGWDCYFS---LPKHKKGYSGVGIYTRNATCAPIRAEEGLLGVLPSPSGTPYRD 114

Query: 133 AKDSFSRAGNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             ++ S  G   A+           ++  G+ + V++        + S  N+        
Sbjct: 115 LPENESIGGYPTALQAAELGVDAAALDAEGRCV-VIEFPAFVLFGVYSPANSNGLRDDFR 173

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220
                 L   I    +     V+ GD N   + + +
Sbjct: 174 YGFICALDCRIRNLVKQGKNVVLVGDLNVTRHEMDS 209


>gi|20130065|ref|NP_611178.1| CG6805 [Drosophila melanogaster]
 gi|7302845|gb|AAF57919.1| CG6805 [Drosophila melanogaster]
 gi|17862048|gb|AAL39501.1| LD06095p [Drosophila melanogaster]
 gi|220942940|gb|ACL84013.1| CG6805-PA [synthetic construct]
          Length = 357

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 89/311 (28%), Gaps = 46/311 (14%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           L++WN+ T + +        S+  TT+         +  D  ++  QE+ +   V K+F 
Sbjct: 14  LLTWNVGTHTPRNQDLSSLLSLNGTTTCPDN-----QLPDIYVIGFQEVSTTPQVLKIFN 68

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLLGAKDSFSRAG 141
            + W +  +     +H     ++     I +    + K++  +++              G
Sbjct: 69  DDPWVLKIADSL-SDHQFVKVDSKQLQGILITMFAQHKHIPHMKEIETEATRTGLGGLWG 127

Query: 142 NRRAVELLVEINGKKIWVLDIHLK-SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           N+ AV + + + G  +  +  HL      L      Y          AQ  +        
Sbjct: 128 NKGAVSIRLSLYGTGVAFVCSHLAAHDEKLKERIEDYHQIVDNHKYNAQGYRRIFDHDF- 186

Query: 201 SLVPFVIAGDFNRKINYL---------------------------GNNDDFWKTIDPNDS 233
                   GD N +++                                 + +  ++    
Sbjct: 187 ----VFWFGDLNFRLSGDMSAWDVRTDVENQRYADLLKLDQLNLLREKGNAFSLLEEQQP 242

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
                 +     N     R     D  +      +  I    +               LS
Sbjct: 243 NFAPTFKFVEGTNDYNLKRRPAWCDRILHR---VQSNIYPGITLSANQLSYQSHMDYTLS 299

Query: 294 DHCPISIDYDF 304
           DH P+S  +++
Sbjct: 300 DHKPVSATFNY 310


>gi|302865816|ref|YP_003834453.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|302568675|gb|ADL44877.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
          Length = 327

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/288 (10%), Positives = 70/288 (24%), Gaps = 63/288 (21%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A+    +RL++ N+   S                +D   L    +    D++ +QE+  
Sbjct: 96  PAADGPTLRLLTANLRLGS----------------ADPAALVDLVRTRRVDVLTVQELTP 139

Query: 77  YNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             A               S    +  +                         +PL     
Sbjct: 140 PLAAELDRLGLAELLPHRSLTPEVGSTGSGVYA------------------RHPLRDTGH 181

Query: 136 SFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             ++        + V + G   + V   H  +      + + ++   +            
Sbjct: 182 RRNKGFFFTQAYVTVTVPGAPPLRVESAHPAAPYAPHVVPDWWTDQRAQ----------- 230

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                      V+AGDFN  +++    D                           +    
Sbjct: 231 -PPATPDGGLSVLAGDFNATLDHAALRDLIATGYTDAADAAGAGFGGTWGPYDG-DPIPP 288

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + ID+ ++D+                     ++     SDH  +  + 
Sbjct: 289 VTIDHVLVDRRIAVRA--------------ARTYPVPGSDHRALLAEL 322


>gi|254486461|ref|ZP_05099666.1| hypothetical protein RGAI101_1118 [Roseobacter sp. GAI101]
 gi|214043330|gb|EEB83968.1| hypothetical protein RGAI101_1118 [Roseobacter sp. GAI101]
          Length = 366

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 65/271 (23%), Gaps = 46/271 (16%)

Query: 32  NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI 91
                   V++  ++VK++  D+  L    K    +I    E+                 
Sbjct: 98  ELDDTDSHVTILASNVKQSNRDFGALIDLIKEKKPEIATALEVDQEWTDELHAALKDDYA 157

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
            + T    N             + +  K      Q   LL       R   R A      
Sbjct: 158 HWVTVPKDNS----------YGMVLMSKLPLAETQVRELLVEDVPSIRTTVRNA------ 201

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
            NG++  +  +H +        +                +     +  +  +P ++ GD 
Sbjct: 202 -NGQEWRLYIVHPEPPVPNHDTKGRDGE-----------IALIGIEASKDDMPAIVTGDL 249

Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
           N            ++ +     L                   + P+D+            
Sbjct: 250 NDVAWSTTTRR--FQRLS--GLLDPRVGRGFYNTFHAGIPMMRWPLDHLF---------- 295

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +  +    +       SDH PI    
Sbjct: 296 ----HDAEFRLISMSRLRNIGSDHFPIMFSL 322


>gi|164664533|ref|NP_001106824.1| synaptojanin-2 isoform a [Mus musculus]
          Length = 1479

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 534 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 593

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 594 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 653

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 654 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 707

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 708 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 767

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 768 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 827

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 828 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 860


>gi|164664529|ref|NP_001106822.1| synaptojanin-2 isoform d [Mus musculus]
          Length = 1171

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 449 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 508

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 509 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 568

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 569 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 622

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 623 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 682

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 683 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 742

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 743 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 775


>gi|148669718|gb|EDL01665.1| synaptojanin 2, isoform CRA_b [Mus musculus]
          Length = 1401

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 501 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 560

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 561 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 620

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 621 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 674

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 675 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 734

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 735 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 794

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 795 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 827


>gi|148669719|gb|EDL01666.1| synaptojanin 2, isoform CRA_c [Mus musculus]
          Length = 1148

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 203 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 262

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 263 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 322

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 323 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 376

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 377 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 436

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 437 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 496

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 497 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 529


>gi|164664527|ref|NP_035653.2| synaptojanin-2 isoform c [Mus musculus]
 gi|148669717|gb|EDL01664.1| synaptojanin 2, isoform CRA_a [Mus musculus]
          Length = 1216

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 449 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 508

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 509 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 568

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 569 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 622

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 623 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 682

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 683 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 742

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 743 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 775


>gi|37805265|gb|AAH60214.1| Synj2 protein [Mus musculus]
          Length = 1349

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 449 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 508

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 509 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 568

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 569 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 622

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 623 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 682

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 683 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 742

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 743 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 775


>gi|3241995|gb|AAC40146.1| synaptojanin 2 isoform alpha [Mus musculus]
          Length = 1216

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 449 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 508

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 509 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 568

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 569 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 622

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 623 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 682

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 683 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 742

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 743 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 775


>gi|3241985|gb|AAC40141.1| synaptojanin 2 isoform beta [Mus musculus]
          Length = 1145

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 534 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 593

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 594 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 653

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 654 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 707

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 708 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 767

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 768 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 827

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 828 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 860


>gi|3241987|gb|AAC40142.1| synaptojanin 2 isoform delta [Mus musculus]
          Length = 844

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 12  VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 71

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 72  GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 131

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 132 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 185

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 186 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 245

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 246 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 305

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 306 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 338


>gi|3241989|gb|AAC40143.1| synaptojanin 2 isoform epsilon [Mus musculus]
          Length = 1133

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 188 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 247

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 248 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 307

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 308 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 361

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 362 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 421

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 422 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 481

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 482 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 514


>gi|74149552|dbj|BAE36412.1| unnamed protein product [Mus musculus]
          Length = 1118

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 218 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 277

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 278 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 337

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 338 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 391

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 392 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 451

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 452 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 511

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 512 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 544


>gi|164664531|ref|NP_001106823.1| synaptojanin-2 isoform b [Mus musculus]
 gi|41018367|sp|Q9D2G5|SYNJ2_MOUSE RecName: Full=Synaptojanin-2; AltName: Full=Synaptic
           inositol-1,4,5-trisphosphate 5-phosphatase 2
 gi|37590481|gb|AAH58749.1| Synj2 protein [Mus musculus]
          Length = 1434

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 534 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 593

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 594 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 653

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 654 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 707

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 708 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 767

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 768 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 827

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 828 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 860


>gi|37359908|dbj|BAC97932.1| mKIAA0348 protein [Mus musculus]
          Length = 1299

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 85/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L     + D    AD+  +  +EM   +A
Sbjct: 399 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDSQDDGSPADVFAIGFEEMVELSA 458

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 459 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 518

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 519 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 572

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 573 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 632

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 633 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 692

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 693 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 725


>gi|307353970|ref|YP_003895021.1| endonuclease/exonuclease/phosphatase [Methanoplanus petrolearius
           DSM 11571]
 gi|307157203|gb|ADN36583.1| Endonuclease/exonuclease/phosphatase [Methanoplanus petrolearius
           DSM 11571]
          Length = 276

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 66/264 (25%), Gaps = 43/264 (16%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                   +    + D++ L E  +      +        +                   
Sbjct: 45  DRAKKQAAWLITQNFDLLLLTECKNSEGCFYIEKYFQSFGYNVVFPKP--------EGKE 96

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + V  K         P +          + R V + + ++ K I ++  ++ S     
Sbjct: 97  YGVMVISKFK-------PEVSDFSKLMTFLSARVVSVKIPLSDKIIEIIVTYVPSRDAST 149

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
             +         L      L  +   +  +    +  GDFN   +    +  F++  +  
Sbjct: 150 EKKERKKKFLKNL------LSCFENDQTSNNR--IFCGDFNILESDHNPHYSFFEEWE-Y 200

Query: 232 DSLIRFPKEKDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILY 280
           +                 N                  D+F   +N    +I+  +     
Sbjct: 201 EFYSSLSNFHLKDAYRYHNPAKMEYSWVGRTGDGYRYDHFFASENLIPNIIECKYVHEPR 260

Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304
                    KRLSDH  +    +F
Sbjct: 261 --------EKRLSDHSSLVCKIEF 276


>gi|115913980|ref|XP_784420.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115941123|ref|XP_001188757.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 596

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 71/220 (32%), Gaps = 34/220 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81
           +++++WNIN L   +                  L++   NLDADI+ LQE  +       
Sbjct: 1   MKVLTWNINGLRACKVP----------------LKELFANLDADIICLQETKITRDQLDN 44

Query: 82  KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +   + +  ++S +++   +S   +     T   + ++ +  L            +   
Sbjct: 45  DLVNVDDYNAYFSFSKKRSGYSGVATYCKNSTTPVIAEEGLTGLLSHGTKQSLIGCYGDQ 104

Query: 141 GNRRAVE-LLVEINGKKIWVLDIH------------LKSFCFLDSLENTYSPSCSLLSQQ 187
                 E L ++  G+ I     +            +  +C     +N    S  +    
Sbjct: 105 SAYSPEELLSIDAEGRTIITQHQYRKKDGALGDLVIINVYCPRAGDDNPERKSFKMRFYN 164

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
              L+       ++    VI GD N     + + D     
Sbjct: 165 LLQLRA--EAMLQAGKSVVIVGDVNASHRRIDHCDPSGNW 202



 Score = 42.2 bits (97), Expect = 0.097,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 26/97 (26%), Gaps = 17/97 (17%)

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQN 265
           D N  +  + + D        +       +E    C +             IDY ++++ 
Sbjct: 257 DSNIDVEDIPSKD---NLFVDSFRYFHPKRENAFTCWSTLTGARQTNYGTRIDYIIVNER 313

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +           +         SDHCP+    
Sbjct: 314 LCVDEL----------TECDIMPEFEGSDHCPVKATL 340


>gi|148235523|ref|NP_001090289.1| hypothetical protein LOC779198 [Xenopus laevis]
 gi|80476213|gb|AAI08442.1| MGC130673 protein [Xenopus laevis]
          Length = 414

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 58/184 (31%), Gaps = 8/184 (4%)

Query: 23  KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              ++ +N+  +  + ++      +           + +   + DADI+ LQE+ +    
Sbjct: 183 PFTVMCFNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVSCDADIISLQEVETEQYY 242

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRVLQQSYPLLGAKDS 136
               P      +       + +K  S+ +       AI  R +   ++Q+          
Sbjct: 243 TLFMPALKERGYDGFFSPKSRAKIMSDQEKKHVDGCAIFFRTEKFSLVQKHTVEFNQIAM 302

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            +  G+   +  ++  +   + VL        F  +    +  S   L   A     W  
Sbjct: 303 ANSEGSEAMLNRVMTKDNIGVSVLLEV--HTDFSGAGMKPHHSSEKQLLMVANAHMHWDP 360

Query: 197 QKKE 200
           +  +
Sbjct: 361 EYSD 364


>gi|2285875|dbj|BAA21652.1| synaptojanin [Bos taurus]
          Length = 1212

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 92/346 (26%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--V 69
           S  +K+R+   +WN+N   +   ++    ++     D   L    +  D      DI  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPMDIFPI 587

Query: 70  FLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNV 121
             +EM   NA   V      +  W          ++      ++    +     +R ++ 
Sbjct: 588 GFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHA 647

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+ AV + +  +   +  +  H  +        N      
Sbjct: 648 PFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNDD---- 703

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
               + A+ L   + +   S       GDFN +I+                     D   
Sbjct: 704 --FLEIARKLSFPMGRLLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLI 761

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN-------- 265
              +       F + K +     K                    D  +  +         
Sbjct: 762 NQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSA 821

Query: 266 -----AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                       ES     +    +   G+   + SDH P+    D
Sbjct: 822 EDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 867


>gi|317487903|ref|ZP_07946495.1| endonuclease/Exonuclease/phosphatase [Eggerthella sp. 1_3_56FAA]
 gi|316913029|gb|EFV34546.1| endonuclease/Exonuclease/phosphatase [Eggerthella sp. 1_3_56FAA]
          Length = 377

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/286 (10%), Positives = 75/286 (26%), Gaps = 58/286 (20%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           T      +R+++ N    +                +D   +    ++   +++ +QE+  
Sbjct: 141 TTPRDTVMRVMTLNTKNGN----------------ADAEQIVSIVRDQHVEVLAMQEVSG 184

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                              E L +     +    +  + V      +   S  +L    S
Sbjct: 185 SLIERLSAAGL-------DELLPSRVIGLAGAGDNGGVNVIYTLAPMRNASESILPLTGS 237

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
                        +     ++ ++  H  S           S +          L+ +  
Sbjct: 238 AVP-------ACTITAGSHEVRLVSAHPTSPKTGTLGFWNESLTN------LGTLRRYSD 284

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN--LRNK 254
           +       ++I GDFN   ++         T+                   +        
Sbjct: 285 E-------YLIMGDFNSTWDHSRYRKMLGDTLVDASEQAGEGFHMTYPSEPHYAMVPVPP 337

Query: 255 IP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +  ID+ V  +N+              +  D+++   + SDH  + 
Sbjct: 338 MIEIDHIVYSKNS------------GMSVGDLETVNVQGSDHFALL 371


>gi|332825343|ref|XP_003311611.1| PREDICTED: synaptojanin-2 isoform 2 [Pan troglodytes]
          Length = 1113

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 91/340 (26%), Gaps = 68/340 (20%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQE 73
           +++R+   +WN+N   +     L    +     D   L     + D    ADI  V  +E
Sbjct: 145 KRIRIAMGTWNVNGGKQFRSNVLRTAELTDWLLDSPQLSGATDSQDDSSPADIFAVGFEE 204

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
           M   +A   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 205 MVELSAGNIVNASTTNKKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIR 264

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        +AGN+ AV +  + +      +  HL +       ++          
Sbjct: 265 DVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAG------QSQVKERNEDYK 318

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR--- 236
           +  Q L   + +   S       GDFN +I+              WK +   D L     
Sbjct: 319 EITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKS 378

Query: 237 ------FPKEKDSRCNANK-------------------------NLRNKIPIDYF----- 260
                    E                                    R K P D       
Sbjct: 379 SGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGELN 438

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++D +                         + SDH P+  
Sbjct: 439 LLDSDLDVDTKVRHTW-SPGALQYYGRAELQASDHRPVLA 477


>gi|332825341|ref|XP_003311610.1| PREDICTED: synaptojanin-2 isoform 1 [Pan troglodytes]
          Length = 1259

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 91/340 (26%), Gaps = 68/340 (20%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQE 73
           +++R+   +WN+N   +     L    +     D   L     + D    ADI  V  +E
Sbjct: 291 KRIRIAMGTWNVNGGKQFRSNVLRTAELTDWLLDSPQLSGATDSQDDSSPADIFAVGFEE 350

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
           M   +A   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 351 MVELSAGNIVNASTTNKKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIR 410

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        +AGN+ AV +  + +      +  HL +       ++          
Sbjct: 411 DVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAG------QSQVKERNEDYK 464

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR--- 236
           +  Q L   + +   S       GDFN +I+              WK +   D L     
Sbjct: 465 EITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKS 524

Query: 237 ------FPKEKDSRCNANK-------------------------NLRNKIPIDYF----- 260
                    E                                    R K P D       
Sbjct: 525 SGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGELN 584

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++D +                         + SDH P+  
Sbjct: 585 LLDSDLDVDTKVRHTW-SPGALQYYGRAELQASDHRPVLA 623


>gi|296010889|ref|NP_001171559.1| synaptojanin-2 isoform 2 [Homo sapiens]
          Length = 1259

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 91/340 (26%), Gaps = 68/340 (20%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQE 73
           +++R+   +WN+N   +     L    +     D   L     + D    ADI  V  +E
Sbjct: 291 KRIRIAMGTWNVNGGKQFRSNVLRTAELTDWLLDSPQLSGATDSQDDSSPADIFAVGFEE 350

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
           M   +A   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 351 MVELSAGNIVNASTTNKKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIR 410

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        +AGN+ AV +  + +      +  HL +       ++          
Sbjct: 411 DVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAG------QSQVKERNEDYK 464

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR--- 236
           +  Q L   + +   S       GDFN +I+              WK +   D L     
Sbjct: 465 EITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKS 524

Query: 237 ------FPKEKDSRCNANK-------------------------NLRNKIPIDYF----- 260
                    E                                    R K P D       
Sbjct: 525 SGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGELN 584

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++D +                         + SDH P+  
Sbjct: 585 LLDSDLDVDTKVRHTW-SPGALQYYGRAELQASDHRPVLA 623


>gi|114705074|ref|ZP_01437982.1| Endonuclease/exonuclease/phosphatase [Fulvimarina pelagi HTCC2506]
 gi|114539859|gb|EAU42979.1| Endonuclease/exonuclease/phosphatase [Fulvimarina pelagi HTCC2506]
          Length = 364

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/251 (11%), Positives = 60/251 (23%), Gaps = 47/251 (18%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            DY      A+  DAD+    E     A      K T+    S     ++          
Sbjct: 117 RDYERCLAMARRADADLALFMETDEGWAEGLSPLKQTYPHVISRPYDNSYG--------- 167

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
               +    + +       L               ++ ++ NG+   +  +H +      
Sbjct: 168 ---MILYSRLELENVEVKFLA-----MDKVPCFICDVRLK-NGRSFRIYCVHPEPPVPNA 218

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                              L       +E   P ++ GD N            ++ +   
Sbjct: 219 DSSGRD-----------AELIRVAKLAREDSKPSIVCGDLNDVAWSHTTR--LFQRLSQ- 264

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L              +    + P+D+                 +  ++   I+     
Sbjct: 265 -LLDPRVGRGFYNTFDARYPVLRWPLDHLF--------------HDEHFSLVTIRRCEHI 309

Query: 292 LSDHCPISIDY 302
            SDH PI    
Sbjct: 310 KSDHFPIFFKL 320


>gi|25361067|gb|AAN73051.1| synaptojanin 2A [Homo sapiens]
 gi|119568052|gb|EAW47667.1| synaptojanin 2, isoform CRA_c [Homo sapiens]
          Length = 1288

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 91/340 (26%), Gaps = 68/340 (20%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQE 73
           +++R+   +WN+N   +     L    +     D   L     + D    ADI  V  +E
Sbjct: 528 KRIRIAMGTWNVNGGKQFRSNVLRTAELTDWLLDSPQLSGATDSQDDSSPADIFAVGFEE 587

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
           M   +A   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 588 MVELSAGNIVNASTTNKKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIR 647

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        +AGN+ AV +  + +      +  HL +       ++          
Sbjct: 648 DVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAG------QSQVKERNEDYK 701

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR--- 236
           +  Q L   + +   S       GDFN +I+              WK +   D L     
Sbjct: 702 EITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKS 761

Query: 237 ------FPKEKDSRCNANK-------------------------NLRNKIPIDYF----- 260
                    E                                    R K P D       
Sbjct: 762 SGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGELN 821

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++D +                         + SDH P+  
Sbjct: 822 LLDSDLDVDTKVRHTW-SPGALQYYGRAELQASDHRPVLA 860


>gi|26190608|ref|NP_003889.1| synaptojanin-2 isoform 1 [Homo sapiens]
 gi|60416428|sp|O15056|SYNJ2_HUMAN RecName: Full=Synaptojanin-2; AltName: Full=Synaptic
           inositol-1,4,5-trisphosphate 5-phosphatase 2
 gi|12034892|gb|AAG46036.1|AF318616_1 synaptojanin 2 [Homo sapiens]
 gi|55957653|emb|CAI12983.1| synaptojanin 2 [Homo sapiens]
 gi|119568050|gb|EAW47665.1| synaptojanin 2, isoform CRA_a [Homo sapiens]
 gi|168272964|dbj|BAG10321.1| synaptojanin-2 [synthetic construct]
          Length = 1496

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 91/340 (26%), Gaps = 68/340 (20%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQE 73
           +++R+   +WN+N   +     L    +     D   L     + D    ADI  V  +E
Sbjct: 528 KRIRIAMGTWNVNGGKQFRSNVLRTAELTDWLLDSPQLSGATDSQDDSSPADIFAVGFEE 587

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
           M   +A   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 588 MVELSAGNIVNASTTNKKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIR 647

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        +AGN+ AV +  + +      +  HL +       ++          
Sbjct: 648 DVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAG------QSQVKERNEDYK 701

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR--- 236
           +  Q L   + +   S       GDFN +I+              WK +   D L     
Sbjct: 702 EITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKS 761

Query: 237 ------FPKEKDSRCNANK-------------------------NLRNKIPIDYF----- 260
                    E                                    R K P D       
Sbjct: 762 SGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGELN 821

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++D +                         + SDH P+  
Sbjct: 822 LLDSDLDVDTKVRHTW-SPGALQYYGRAELQASDHRPVLA 860


>gi|4104822|gb|AAD02178.1| synaptojanin 2B [Homo sapiens]
 gi|6634019|dbj|BAA20805.2| KIAA0348 protein [Homo sapiens]
          Length = 1443

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 91/340 (26%), Gaps = 68/340 (20%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQE 73
           +++R+   +WN+N   +     L    +     D   L     + D    ADI  V  +E
Sbjct: 475 KRIRIAMGTWNVNGGKQFRSNVLRTAELTDWLLDSPQLSGATDSQDDSSPADIFAVGFEE 534

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQ 125
           M   +A   V    T    +  +     S+      + +A        I VR  +V  ++
Sbjct: 535 MVELSAGNIVNASTTNKKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIR 594

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185
                        +AGN+ AV +  + +      +  HL +       ++          
Sbjct: 595 DVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAG------QSQVKERNEDYK 648

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR--- 236
           +  Q L   + +   S       GDFN +I+              WK +   D L     
Sbjct: 649 EITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKS 708

Query: 237 ------FPKEKDSRCNANK-------------------------NLRNKIPIDYF----- 260
                    E                                    R K P D       
Sbjct: 709 SGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGELN 768

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           ++D +                         + SDH P+  
Sbjct: 769 LLDSDLDVDTKVRHTW-SPGALQYYGRAELQASDHRPVLA 807


>gi|218245932|ref|YP_002371303.1| hypothetical protein PCC8801_1073 [Cyanothece sp. PCC 8801]
 gi|218166410|gb|ACK65147.1| protein of unknown function DUF1555 [Cyanothece sp. PCC 8801]
          Length = 457

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 13/117 (11%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWN-----------INTLSEQEGVSLWKNSVKRTTS 52
              +++   L+   A  A   R+ ++N           I  L        +        +
Sbjct: 13  SLTISVTLTLLSSMAQAASTFRIATYNTSLSPNAQNALIQALLIAPNDPEYNTDPLAIQA 72

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
               + +  + +D DI+ L E         +  +     + S  + I+ +   +  +
Sbjct: 73  R--QIAEVIQRIDPDIILLNEFNYDPNNPTLAAELFQQNYLSVGQNISGNSAANPIN 127


>gi|326202038|ref|ZP_08191908.1| Endonuclease/exonuclease/phosphatase [Clostridium papyrosolvens DSM
           2782]
 gi|325987833|gb|EGD48659.1| Endonuclease/exonuclease/phosphatase [Clostridium papyrosolvens DSM
           2782]
          Length = 355

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 92/309 (29%), Gaps = 30/309 (9%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSW---NINTLSEQEGVSLWKNSVKRTT-SDYTLL 57
            +K +   +  +          + + +    NIN  +         N+       D    
Sbjct: 61  KKKVIFIGIVSVSLIMGITQFDINIATKSNNNINKDNYMPVKVFCWNTNLWDQLKDGNAF 120

Query: 58  RQYAKNLDADIVFLQE----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
             Y KN  AD+  LQE    +   N  ++   K    I       +   + +        
Sbjct: 121 YDYLKNQKADVYLLQEYLHCVTDRNDKSQKPFKICNIIPGFPPNYLTIDETERIKKEFPG 180

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
                    V+   YP++ +   +S           VEINGK +   ++H+       + 
Sbjct: 181 YYFSTDGQFVIISKYPIIRSHADYSEQY----AVSDVEINGKTMRFFNVHMLLHIEPGNP 236

Query: 174 ENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
              Y  +      +A+ +  K+     K++   + I GDFN   +    N      ID  
Sbjct: 237 FVPYFYNAISRRYKAREIGFKNLYEDIKKTKTDYFIEGDFNSSKSMGVMNGLLKDHIDTV 296

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                             +       DY  + +N    +    +              K 
Sbjct: 297 KYSKYILPLTFE-----MDGLKLWRFDYAFVPKNDNILISSHKYLPH-----------KG 340

Query: 292 LSDHCPISI 300
           LSDH P+SI
Sbjct: 341 LSDHNPLSI 349


>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
 gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
          Length = 1217

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/330 (10%), Positives = 73/330 (22%), Gaps = 63/330 (19%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +           + ++N+                 R  + +  +     N  AD++ LQE
Sbjct: 257 LEPVTVRNNNFTISTYNV------LAEFTRPPPQDRYEALFRNI--LYTNALADVLVLQE 308

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +     +  +  K+    +          +          +   +  V + Q  +     
Sbjct: 309 VCDSFLLFLLSHKDIQRRYPFVTHGPPGQRGSPP------LPSLRNIVVLSQWRFTWTWL 362

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
             +    G        +      +  + + +     L         S      Q   +  
Sbjct: 363 PFNERHKGAAIIKIDEIGDLKSSLPAVVVAVHLTSGLSDAAVDSKVS------QINSIIH 416

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDD------------------------------ 223
            +        P VIAGDFN   +    ++                               
Sbjct: 417 SLDSDY-HGHPSVIAGDFNFPTSQEVIDEALKQNMISSAGAEKILGFNCLLSKAHFMDGW 475

Query: 224 -----------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272
                      F   +   +    F    +               D   + Q     +  
Sbjct: 476 VVAGEEPGDTGFDNMLGVGEQGATFDPILNPLAAQYSVKGRPHRYDRIFVRQTGKTSVTD 535

Query: 273 ESFSEILYNED-DIKSRGKRLSDHCPISID 301
            +F  +  +   +        SDH  I  D
Sbjct: 536 FNFFGLRNDLQCEDLRMSDFASDHWGIRAD 565


>gi|84389772|ref|ZP_00991324.1| hypothetical protein V12B01_21866 [Vibrio splendidus 12B01]
 gi|84376873|gb|EAP93747.1| hypothetical protein V12B01_21866 [Vibrio splendidus 12B01]
          Length = 280

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 83/283 (29%), Gaps = 64/283 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + +  WNI           +K +     S+   L        +D+V LQE      +
Sbjct: 58  SDGLDITVWNI-----------YKQNRNNWQSELNKLSA-----GSDLVLLQEASMTVEL 101

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        S +            +    +     ++ +   +Y      +     
Sbjct: 102 R--------QWVTSGQWGSTRVNAFEAFEQSAGVLNLATHLPIEACAY----THEEPWLQ 149

Query: 141 GNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             + A+    ++ NG+++ V++IH  +F F                 Q + L D + + +
Sbjct: 150 LPKSALWSRYQLSNGEELAVINIHAVNFTFGTEDYEA----------QLKSLTDNLQKYR 199

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P + AGDFN        ++  +  +      +   +      +        + +D+
Sbjct: 200 G---PVIFAGDFNSW------SEARFAVLKGVLEQVGLTEVAFEP-DNRTQFMTGLVLDH 249

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                  +  K+     SDH P+ + +
Sbjct: 250 VFYRG---------------LEVEKAKAPITDASDHNPMRVTF 277


>gi|301618009|ref|XP_002938425.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1 [Xenopus
           (Silurana) tropicalis]
          Length = 1177

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 74/302 (24%), Gaps = 45/302 (14%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMGSYNAVAKV 83
           + +WN+N  S   G+  W  +                    D  ++  QE+         
Sbjct: 519 VGTWNVNGQSPDGGLEPWLQAD---------------AEPPDVYVIGFQELDLSTEAFFY 563

Query: 84  FP---KNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLLGAKDS 136
           F    +  W              ++        + +    + ++ + +++          
Sbjct: 564 FDSGKEQEWLEAVERCLHTKAKYKNVRLIRLVGMMMLVFAKHEHFKHIREVVAESVGTGI 623

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             + GN+  V +    +      ++ HL +        N                ++   
Sbjct: 624 MGKMGNKGGVAVRFVFHNTSFCFVNSHLAAHVEDFERRNQDYKDICARLNFTVPDQNIPI 683

Query: 197 QKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTID------PNDSLIRFPKEKD 242
                    +  GD N ++          L   +D    +         +    F    +
Sbjct: 684 SNIMKHDVVIWLGDLNYRLCKFDAAEVKSLIAKNDIQTLLKYDQLNIQREMKNVFSDFTE 743

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----DIKSRGKRLSDHCP 297
              N     +     D    D +    +       +    +            + SDH P
Sbjct: 744 GTINFIPTYKFDAKTDR--WDSSGKCRVPAWCDRVLWRGTNITQLKYRSHMELKTSDHKP 801

Query: 298 IS 299
           +S
Sbjct: 802 VS 803


>gi|197100708|ref|NP_001125941.1| inositol polyphosphate 5-phosphatase OCRL-1 [Pongo abelii]
 gi|55729733|emb|CAH91595.1| hypothetical protein [Pongo abelii]
          Length = 893

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 76/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +    +    + +    RK   R ++     
Sbjct: 283 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLERLVGMMLLIFARKDQCRYIRDIATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHMEDFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 403 NQTLPQLNIMKHDVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 462

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 463 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 514

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 515 SH----MELKTSDHKPVSA 529


>gi|83770113|dbj|BAE60247.1| unnamed protein product [Aspergillus oryzae]
          Length = 1191

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/321 (12%), Positives = 85/321 (26%), Gaps = 54/321 (16%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEM 74
           S  + +R+   ++N+N            +      +         +  D  I  V  QE+
Sbjct: 602 SSTKPIRIWTGTFNVNG----RHRGPDVDLAPWLWAGIDE-----QTEDPTIFAVGFQEI 652

Query: 75  GSYNAVAKVFPKNTWCIFYS----------TERLINHSKRDSNNDIHTA----IAVRKKN 120
            S +    +    T    +                        +         + VR+  
Sbjct: 653 VSLSPQQIMSTDPTTRKVWEVAVGNCLNSRARSRGTSKYVLLRSGQLVGAALMVYVREDA 712

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           +R ++     +        AGN+    +  E +  +I  +  HL +        N    +
Sbjct: 713 LRDVKNVEGSVKKTGLSGMAGNKGGCAIRFEYSNTRICFVTAHLAAGFANYDERNRDYET 772

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDF 224
                     L+    +  E     +  GDFN +I    +                ND  
Sbjct: 773 IYHG------LRFQKNRAIEDHEAIIWLGDFNYRIGLDSHFVRELVAQKDYQKLYNNDQL 826

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNE 282
              +    +   + +   +     K   +    D     +      +  +  +      +
Sbjct: 827 NLQMLAGRAFPFYTEGLITFPPTYKYDIDSDTYD---TSEKARIPAWCDRILWRGSCLRQ 883

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
            D  +   R SDH P+   + 
Sbjct: 884 IDYNTAKLRFSDHRPVWATFS 904


>gi|238790138|ref|ZP_04633915.1| hypothetical protein yfred0001_34940 [Yersinia frederiksenii ATCC
           33641]
 gi|238721807|gb|EEQ13470.1| hypothetical protein yfred0001_34940 [Yersinia frederiksenii ATCC
           33641]
          Length = 253

 Score = 50.3 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 86/294 (29%), Gaps = 83/294 (28%)

Query: 19  SVAQKVRLVSWNI------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
             ++ +R++ WNI        LS  +G                         DA ++ LQ
Sbjct: 31  PTSEFLRVMVWNIFKQQRAEWLSVLKGFGR----------------------DAQLMLLQ 68

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E  +   + +                     + ++     A+      V  L  ++P+  
Sbjct: 69  EAQTTPELVRFA---------------TSHYQAADQVPAFALPQHPSGVMTLAATHPVYC 113

Query: 133 AKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                     R +   L+ +    +G+ + V++IH  +F     + +           Q 
Sbjct: 114 CPLREREPLLRLSKSALITVYPIHDGRLLMVVNIHAVNFSLGVDVYSK----------QL 163

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           + + + I   +    P ++AGDFN         +   +            +        +
Sbjct: 164 EPIGEQIAMHRG---PVILAGDFNAW--SRQRVNALQRFAQGAGLAEVEFQAD------H 212

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++     P+D+                        D      R SDH P+ +++
Sbjct: 213 RSRAFGRPLDFVFYRG---------------LTLADASVLVTRASDHNPLLVEF 251


>gi|225425732|ref|XP_002271092.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 216

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/263 (9%), Positives = 67/263 (25%), Gaps = 59/263 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+++++WN+   ++               S   +++ Y +N   D++ +QE         
Sbjct: 2   KMKIITWNVRGANDS--------------SKRKIIKNYIRNQRVDLMCIQETKIQEMSEG 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +        F     L               I +      +                   
Sbjct: 48  IVRSLGSGRFLDWRALNAEGAAG-------GILICWDKRVLE-----------ILDWEEG 89

Query: 143 RRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           + ++    +   NG       ++                +   L                
Sbjct: 90  QFSLSCRFKTIENGATWVFTGVYGPFTKVEREGMWEELGAIRGLW--------------- 134

Query: 201 SLVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
              P+ + GDFN  +     +           F + +D  + +    +  +   +   N 
Sbjct: 135 -DDPWCLGGDFNITLFQHERSSQRRTSSAMRRFAEFVDDLELVDLTLQGGEFTWSGGLNN 193

Query: 252 RNKIPIDYFVMDQNAYKFLIQES 274
           +    +D F++  +        +
Sbjct: 194 QAWARLDRFLVSPSWLDQFSGVT 216


>gi|207080050|ref|NP_001128793.1| DKFZP459I087 protein [Pongo abelii]
 gi|55728462|emb|CAH90974.1| hypothetical protein [Pongo abelii]
          Length = 212

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 62/202 (30%), Gaps = 18/202 (8%)

Query: 27  VSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +S+NI    L E         +  V   +  +  + +  K+ DAD++ LQE+   +  A+
Sbjct: 1   MSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGAE 60

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           + P      ++       +  R        AI  +     +L  +              +
Sbjct: 61  IRPSLESLGYHCE-----YKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPGISLLDRD 115

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + LL++       +      + C  ++          +   Q   L   I+      
Sbjct: 116 NVGLVLLLQPK-----IPCAASPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQK 170

Query: 203 V----PFVIAGDFNRKINYLGN 220
                P V+ GDF+        
Sbjct: 171 DGSFCPIVMCGDFSSVPGSPLY 192


>gi|317147744|ref|XP_001822249.2| inositol-1,4,5-trisphosphate 5-phosphatase 1 [Aspergillus oryzae
           RIB40]
          Length = 1168

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/321 (12%), Positives = 85/321 (26%), Gaps = 54/321 (16%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEM 74
           S  + +R+   ++N+N            +      +         +  D  I  V  QE+
Sbjct: 579 SSTKPIRIWTGTFNVNG----RHRGPDVDLAPWLWAGIDE-----QTEDPTIFAVGFQEI 629

Query: 75  GSYNAVAKVFPKNTWCIFYS----------TERLINHSKRDSNNDIHTA----IAVRKKN 120
            S +    +    T    +                        +         + VR+  
Sbjct: 630 VSLSPQQIMSTDPTTRKVWEVAVGNCLNSRARSRGTSKYVLLRSGQLVGAALMVYVREDA 689

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           +R ++     +        AGN+    +  E +  +I  +  HL +        N    +
Sbjct: 690 LRDVKNVEGSVKKTGLSGMAGNKGGCAIRFEYSNTRICFVTAHLAAGFANYDERNRDYET 749

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDF 224
                     L+    +  E     +  GDFN +I    +                ND  
Sbjct: 750 IYHG------LRFQKNRAIEDHEAIIWLGDFNYRIGLDSHFVRELVAQKDYQKLYNNDQL 803

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNE 282
              +    +   + +   +     K   +    D     +      +  +  +      +
Sbjct: 804 NLQMLAGRAFPFYTEGLITFPPTYKYDIDSDTYD---TSEKARIPAWCDRILWRGSCLRQ 860

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
            D  +   R SDH P+   + 
Sbjct: 861 IDYNTAKLRFSDHRPVWATFS 881


>gi|313472632|ref|ZP_07813121.1| putative endonuclease-exonuclease-phosphatase family protein
           [Lactobacillus jensenii 1153]
 gi|313448964|gb|EEQ68414.2| putative endonuclease-exonuclease-phosphatase family protein
           [Lactobacillus jensenii 1153]
          Length = 327

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/222 (11%), Positives = 63/222 (28%), Gaps = 26/222 (11%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKN------------------SVKRTTSDYTLLR 58
           T +  +   L ++N+   +     S + +                  S     +D     
Sbjct: 52  TLATNKTYTLTTYNVGFGAYNPKYSFFMDTGEMKNGAKTRGKYGTAVSKASELADTKGTI 111

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118
              K  + D  F QE+ + +   + F  N   +  +    +  S   + +  + A  +  
Sbjct: 112 ATIKKQNPDFAFFQEIDTNS--TRSFGVNQVKMAENAFDDMGSSFAQNFHSAYIAFPLNN 169

Query: 119 KNVRVLQQSY---PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF---CFLDS 172
            +                     +     ++        +   V+ + +K+      ++S
Sbjct: 170 PHGFARSGILALSKYHIDSSERRKYFVSSSLIEKFVDLDRCFNVMRLPVKNDKELVLINS 229

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
             + Y        +Q   L   +  + +     +  GDFN  
Sbjct: 230 HMSAYDKGGLSKKKQLALLNHVMKAEIQKGNYVICGGDFNHA 271


>gi|62389560|ref|YP_224962.1| exodeoxyribonuclease [Corynebacterium glutamicum ATCC 13032]
 gi|41324894|emb|CAF19376.1| PUTATIVE EXODEOXYRIBONUCLEASE [Corynebacterium glutamicum ATCC
           13032]
          Length = 319

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/340 (9%), Positives = 76/340 (22%), Gaps = 90/340 (26%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             T+  +    + S N+N +             +R+ ++   L  + +    D+V LQE+
Sbjct: 9   APTSVTSMSFHITSVNVNGIRA--------AVKQRSETNLGFL-PWLEETRPDVVLLQEV 59

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +         +      +       +    +       + +  ++              
Sbjct: 60  RASEKDTATALQPALDNGWH------YIGAPAAAKGRAGVGILSRHELEDVN-----IGF 108

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            SF  +G      +        + V  ++L S       ++                + +
Sbjct: 109 GSFLDSGRYIEATIKDTTLDVPVTVASLYLPSGSAGTDKQDEKYR-------FLDEFEGF 161

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDF------------------------------ 224
           + Q+ +     VI GD+N         +                                
Sbjct: 162 LDQRAKERSHMVIGGDWNICHRREDLKNWKTNQKKSGFLPDERAFMDSVFGTFPDEATQV 221

Query: 225 -----------------WKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPID 258
                             +            + +            +           ID
Sbjct: 222 AGAGDFFGAVDYEGTRRREATTDPAWFDVARRLQPEGDGPYTWWTYRGKAFDTGAGWRID 281

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           Y        +   +          D   +   R SDH P+
Sbjct: 282 YQAATAAMLERAERSWV-------DKAAAYDLRWSDHSPL 314


>gi|291298485|ref|YP_003509763.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290567705|gb|ADD40670.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 327

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/279 (10%), Positives = 68/279 (24%), Gaps = 61/279 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++R+++ N+                    +D   +     +   D++ + E+   +AV K
Sbjct: 102 QLRVMTANV----------------LTGDADLDAIADLVVDNKIDVLTVLEL-DADAVDK 144

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +                      +         +  ++         + G          
Sbjct: 145 LAKTEVADQLPHQVLKPADKAAGTG--------IYSRHELTENDELAVDGL-------FY 189

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             A  + V   G   +V            +    +                 +       
Sbjct: 190 NPAATIDVPKAGDVEFVAVHPSPPINPDRTRHWRHD-------------LRALPPAPTDG 236

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P ++AGDFN  +++    D                         +KN   K+ ID+ + 
Sbjct: 237 TPRILAGDFNATLDHRILRDLIAMGYTDAADATGS--GLTGTWPTDKNFPPKVTIDHVLT 294

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                        +   Y    I +     SDH  ++  
Sbjct: 295 S---------TGITPTTYATHTIPN-----SDHRALTTT 319


>gi|147777299|emb|CAN66801.1| hypothetical protein VITISV_015403 [Vitis vinifera]
          Length = 965

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 35/109 (32%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P  + GDFN  ++    +           F + +D  + +    +          + +
Sbjct: 156 GEPXCVGGDFNVILSQGERSRQGRVTSAMRRFAQVMDDLELIDLPLQGGSFTWGGGLHNQ 215

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F++  +              ++    K     +SDH PI I+
Sbjct: 216 AWARLDRFMVSSS----------WLDQFSNVTQKRLSWPISDHFPILIE 254


>gi|330812595|ref|YP_004357057.1| catabolite repression control protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327380703|gb|AEA72053.1| catabolite repression control protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 259

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/274 (9%), Positives = 71/274 (25%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASAFELDDAAFQLDGYFLYACDAEVPAQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       +       D + R          ++ +  K+ +  + L S    D   
Sbjct: 69  ALYSRLQPKAVINGLGFETADRYGRY---------LQADFDKVSIATLLLPSGQNGD--- 116

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF----------------NRKINYL 218
                  +   +       ++ +++     ++  G                         
Sbjct: 117 ----EDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLA 172

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQNAYKFL 270
                  + I     +    +        +    N            DY ++     +F+
Sbjct: 173 PERAWMDEIIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RSA-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|115451797|ref|NP_001049499.1| Os03g0238300 [Oryza sativa Japonica Group]
 gi|108707070|gb|ABF94865.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2, putative,
           expressed [Oryza sativa Japonica Group]
 gi|113547970|dbj|BAF11413.1| Os03g0238300 [Oryza sativa Japonica Group]
 gi|215765312|dbj|BAG87009.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215768554|dbj|BAH00783.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 495

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 69/257 (26%), Gaps = 31/257 (12%)

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLG 132
             A  +        I      L     R   +         + VR    R ++++     
Sbjct: 192 QQAAQQKVHPVRGGIGGGGGELACRDYRCVVSKQMVGILLTVWVRADLARFVRRASVSCV 251

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL--LSQQAQW 190
                   GN+ AV +   ++     V   HL S        +  + +  +   +   + 
Sbjct: 252 GCGVMGCLGNKGAVSVRFWLHDTSFCVACCHLASGGRDGDEAHRNADATEILSRTTFPRG 311

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLG------NNDDFWKTIDPNDS----------- 233
               + QK       ++ GD N +I+              WKT+  ND            
Sbjct: 312 HSLNLPQKILDHDRVILLGDLNYRISLPEAKTRLLVERQDWKTLLENDQLRSEVESEGGA 371

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-------AYKFLIQESFSEILYNEDDIK 286
              + +   +     K   N     Y             A  +  +  +      +    
Sbjct: 372 FHGWNEGAIAFSPTYKYYPNSDTY-YGCASHGRKGEKRRAPAWCDRILWRGAGLKQKRYD 430

Query: 287 SRGKRLSDHCPISIDYD 303
               RLSDH P+   ++
Sbjct: 431 RCESRLSDHRPVRALFE 447


>gi|90425348|ref|YP_533718.1| endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris
           BisB18]
 gi|90107362|gb|ABD89399.1| Endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris
           BisB18]
          Length = 328

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 87/310 (28%), Gaps = 62/310 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------- 74
             +R+ S N        G+S+WK  +++       L +   +L  D+V LQE+       
Sbjct: 47  GTLRVGSLNT-------GLSVWKIDLQQWRLRAAQLSKLIGDLSLDVVLLQEIWRIKWDE 99

Query: 75  -----------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                             + + V      + + +  S     +  +R+        I  R
Sbjct: 100 TTDEMKTFLTGLGLSGDQNKDDVLAAALGSGFQVRSSLVPSFDRGRREPGLYWGLTIVSR 159

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENT 176
               +V ++                R A    ++  NG     +++HL +      L   
Sbjct: 160 FPIEQVEKKELSYSKF-----DRWPRIAQSGKIKLANGDSSIFVNVHLPAESHESRLGLG 214

Query: 177 YSPSCSLLSQQAQWLK--DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                   S  A  L     +    ++    +   +++   +        ++  +     
Sbjct: 215 LETLSFSRSLGAPTLCIGGDMNAGPQAGPVQIFMTEYSDCWSSGSTRVVKFEGNESRAGS 274

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-S 293
             +    +              IDY + D+ A           I  +       G    S
Sbjct: 275 ALYRTVAEG------------RIDYLLADKMAR----------ITSSTYLYGDYGSAPLS 312

Query: 294 DHCPISIDYD 303
           DH  +  + +
Sbjct: 313 DHPFVIAEIE 322


>gi|329577242|gb|EGG58708.1| conserved domain protein [Enterococcus faecalis TX1467]
          Length = 110

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 35/116 (30%), Gaps = 18/116 (15%)

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSRC 245
            + L D I Q      P ++ GDFN + +    +    K      N +    P+      
Sbjct: 5   LEELHDKIAQY-----PTLLMGDFNAE-SGEEVHQLVQKKFQDSKNLATHYGPRGTFQNF 58

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              K       IDY  +          + +             G+  SDH P+  +
Sbjct: 59  TYTKPWAELEEIDYIYV----------KGWQVQQTASLTDSIDGRFPSDHFPLEAE 104


>gi|298376526|ref|ZP_06986481.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298266404|gb|EFI08062.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 272

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 80/314 (25%), Gaps = 87/314 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R + WNI+                +  S ++ +   A+  + D++ + E      +  +
Sbjct: 1   MRFLFWNIH----------------KNESLFSSIASIAEAENIDVLMIAECPENKQLDLL 44

Query: 84  --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                N   IF     ++N+ K       H  I  ++   R+  +       +       
Sbjct: 45  KSLNANNSDIFKYLVPIVNYQKVMVYYR-HCKITNKEDKPRISVKELYSPLLQ------- 96

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                          I ++  HL S           + S   LS++A+ L+ +I   +  
Sbjct: 97  -------------GNITLVICHLHS---------KINNSDEELSEKAESLRRFIEDIESK 134

Query: 202 --LVPFVIAGDFNRKINYLGN------------------------------NDDFWKTID 229
                 +  GDFN      G                                +  W  + 
Sbjct: 135 LGHQRTICCGDFNMNPFDKGIIKAQGLHAVMEKNIANKKECIIESEKFSFFYNPMWGFLG 194

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR- 288
                           +           D  ++  +      +     +           
Sbjct: 195 DLGRGDVS--GTMYYNSGGHINYYWHLYDQVLIRPDMINSFDESDLKIVTSANKLDLLTS 252

Query: 289 ----GKRLSDHCPI 298
                K LSDH PI
Sbjct: 253 NNLVDKSLSDHLPI 266


>gi|295395928|ref|ZP_06806113.1| endonuclease/exonuclease/phosphatase [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294971201|gb|EFG47091.1| endonuclease/exonuclease/phosphatase [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 325

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 74/281 (26%), Gaps = 66/281 (23%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
             A     + +VS N+   +                  Y  L Q  ++ DADIV +QE  
Sbjct: 100 VAAPSGDSLTVVSANVLIGNNS----------------YDRLFQRIRDTDADIVAMQEAA 143

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                 K+        +  T          S  D  + + V+K     +  S+ L  A  
Sbjct: 144 HTTVEDKLEKYGLVDKYLVTPETPT----ASPTDADSLLLVKKNLKPQVIDSHTLPFAT- 198

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                         V  +  +++ +  H      +D      S        +   L    
Sbjct: 199 ------------AGVRTSIGEVYSVHAHAPVQRSVDQRNWARSVKTERDLCEHATL---- 242

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
                      +AGDFN   +         +T    D+             ++ +     
Sbjct: 243 -----------LAGDFNATTDSP-----LMRTGRCVDAADELKMGARGSWPSSWSSLLGA 286

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            ID+ + + N       E F                 SDH 
Sbjct: 287 RIDHHLYNHNVLTPYKGEMFVVD-------------GSDHR 314


>gi|312963856|ref|ZP_07778327.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
 gi|311281891|gb|EFQ60501.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
          Length = 259

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/274 (11%), Positives = 76/274 (27%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDAEVPAQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       S       D + R          ++ +  K+ +  + L S    D   
Sbjct: 69  ALYSRLQPKAVISGLGFETADRYGRY---------LQADFDKVSIATLLLPSGQNGD--- 116

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG---------------DFNRKINYLG 219
                  +   +       ++ +++     ++  G               D  +   +L 
Sbjct: 117 ----EDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLA 172

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFL 270
               +   I  N   +   +E     +                    DY ++     +F+
Sbjct: 173 PERAWMDEIVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RSA-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|154270051|ref|XP_001535895.1| hypothetical protein HCAG_09198 [Ajellomyces capsulatus NAm1]
 gi|150412984|gb|EDN08368.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 841

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 57/255 (22%), Gaps = 47/255 (18%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            LL   A     D++ +QE                   +                     
Sbjct: 3   ALLADPATEDKYDVIAVQEPS---------RNPHMLATHCPRSCGFWPAYHPETHPRVCF 53

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            V K+ V    + +             +     L +  +  K+ +++++        S  
Sbjct: 54  LVNKRLVEHTWECHY-----------HSEYIAVLTITTDLGKVQIVNVYAPPPGGYSSEP 102

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTI 228
                       Q Q +         +    VI GD N             N    W+ I
Sbjct: 103 EESP------IGQLQEVAGM-----GTDAELVILGDLNVHHERWGGVRVERNFRMAWQLI 151

Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
              D L                      ID   +    +  L + +              
Sbjct: 152 AQVDRLGLQLATPVGATTWQDRGSPGTTIDLTFLSPLLHDKLRRCAI----------AEE 201

Query: 289 GKRLSDHCPISIDYD 303
             + SDH PI    +
Sbjct: 202 ACKGSDHKPIETTLE 216


>gi|70733340|ref|YP_263115.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf-5]
 gi|68347639|gb|AAY95245.1| exodeoxyribonuclease III, putative [Pseudomonas fluorescens Pf-5]
          Length = 259

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/274 (10%), Positives = 71/274 (25%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDAEVPAQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       S       D + R          ++ +  K+ +  + L S    D   
Sbjct: 69  ALYSRLQPKAVISGLGFETADRYGRY---------LQADFDKVSIATLLLPSGQNGD--- 116

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF----------------NRKINYL 218
                  +   +       ++ +++     ++  G                         
Sbjct: 117 ----EDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLA 172

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQNAYKFL 270
                  + I     +    +        +    N            DY ++     +F+
Sbjct: 173 PERAWMDEIIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RSA-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|328884931|emb|CCA58170.1| hypothetical protein SVEN_4884 [Streptomyces venezuelae ATCC 10712]
          Length = 332

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 68/282 (24%), Gaps = 54/282 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A     +RLVSWN                      D      + ++L AD++ LQE  + 
Sbjct: 85  AEAPGGLRLVSWNTQH--------------WNQGGDPDRFYAFLRSLAADVLVLQEYLN- 129

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                                      D +++     A    ++ V   +  L     + 
Sbjct: 130 -------------------GFEGGEVWDIDDEERIRAAFPGHHLAVANNAVTLSRFPPAG 170

Query: 138 SRAGNRRA-VELLVEINGKKIWVLDIHLK--SFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                    + + + I    +   ++H+                      + + +     
Sbjct: 171 PPVPVGACSLRVDLRIGDGVLSTYNVHIPVQLTVMNPLRPAFLRDMRRRAAARDREYAAL 230

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           +   +++  P ++ GDFN                D         +         ++    
Sbjct: 231 VADLRDNPHPVLVTGDFNTSAAIGDIRRMPGTLRDAIG----ACRSLCPASWNARSRLRL 286

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             ID+      A                       + LSDH 
Sbjct: 287 WRIDWAFTGGGARV-------------GSYRFRDAEGLSDHL 315


>gi|198437020|ref|XP_002122014.1| PREDICTED: similar to phosphatidylinositol polyphosphate
           5-phosphatase [Ciona intestinalis]
          Length = 855

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/315 (10%), Positives = 84/315 (26%), Gaps = 55/315 (17%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + +WN+N     E +  W +S               +    D+  +  QE+         
Sbjct: 190 VGTWNVNGQLPTEPLDAWVSS---------------EATPPDVYAIGFQELDLSKEAFVF 234

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR----KKNVRVLQQSYPLLGAKDS 136
            +   +  W            S +   +     + +      ++++ +            
Sbjct: 235 TESSREEEWMRAVKQALHPGASYKLVKHIRLVGMMLLVFAQDRHLQDITAVASHHVGTGL 294

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             + GN+  V + + ++   +  ++ HL +        N          +        I+
Sbjct: 295 LGKMGNKGGVGIRIMLHNSSLCFINSHLAAHLEEIQRRNQDYEDICSRMKFPDPEGQSIS 354

Query: 197 QKKESLVPFVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSLIRFPK 239
               S    +  GD N +I+ L                   +D         +    F +
Sbjct: 355 VF--SNDVLIWLGDLNYRIDKLPLETVKERIEKGQYEKLKEHDQLTNQRREGNVYPDFEE 412

Query: 240 EKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
              +     K                    D  +  ++A     +    +++        
Sbjct: 413 GDLTFRPTYKYNPGTDEWDTSEKCRCPAWCDRILWKESAKAKPRKTKRKDLVQLLKYQAH 472

Query: 288 RGKRLSDHCPISIDY 302
              ++SDH P+S  +
Sbjct: 473 LSLKISDHKPVSAVF 487


>gi|229593354|ref|YP_002875473.1| putative exodeoxyribonuclease III [Pseudomonas fluorescens SBW25]
 gi|50660344|gb|AAT80896.1| catabolite repression control protein [Pseudomonas fluorescens]
 gi|229365220|emb|CAY53517.1| putative exodeoxyribonuclease III [Pseudomonas fluorescens SBW25]
          Length = 259

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/274 (11%), Positives = 76/274 (27%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDAEVPTQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       S       D + R          ++ +  K+ +  + L S    D   
Sbjct: 69  ALYSRLQPKAVISGLGFETADRYGRY---------LQADFDKVSIATLLLPSGQNGD--- 116

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG---------------DFNRKINYLG 219
                  +   +       ++ +++     ++  G               D  +   +L 
Sbjct: 117 ----EDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLA 172

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFL 270
               +   I  N   +   +E     +                    DY ++     +F+
Sbjct: 173 PERAWMDEIVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RSA-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|242003618|ref|XP_002422799.1| Skeletal muscle and kidney-enriched inositol phosphatase, putative
           [Pediculus humanus corporis]
 gi|212505657|gb|EEB10061.1| Skeletal muscle and kidney-enriched inositol phosphatase, putative
           [Pediculus humanus corporis]
          Length = 428

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 91/313 (29%), Gaps = 43/313 (13%)

Query: 22  QKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-- 77
             +R+  VS+N+     +E +       +++  +           D  IV LQE+ +   
Sbjct: 2   DSLRIYIVSYNVACKPPEENLEELLGF-EKSEENLP---------DFYIVGLQEVKAQLY 51

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--KD 135
           N V      + W I +   +  N+ K  +       +++  K   +L      +      
Sbjct: 52  NIVLDALLDDPWTIAFKQLKSKNYIKLKTVRLQGLILSIYSKKNHLLNVRDIEMQYIKTG 111

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                GN+  V + + + G  + V++ HL      D          + +     +++   
Sbjct: 112 LGGFWGNKGGVAIRMNVYGVSVCVVNTHLTP---HDQNLQARIDDYNQIINTMNFVRQKE 168

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKN--- 250
           T            GD N +I+   ++++    I            +    R N       
Sbjct: 169 TTSILFHDYVFWLGDHNFRIDEAISHEEILDKIKAKKLDWLKNVDQLTSVRRNGQAFSEL 228

Query: 251 ----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNED---------------DIKSRGKR 291
                       Y                  ILY  +                       
Sbjct: 229 IEEPFNFPPTYKYIFKTCEYDPKRRPAWTDRILYKVNANAYENITLSANMISYKSFPNYL 288

Query: 292 LSDHCPISIDYDF 304
           +SDH PI+ ++ F
Sbjct: 289 VSDHKPIAGEFIF 301


>gi|189192006|ref|XP_001932342.1| inositol phosphosphingolipids phospholipase C [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187973948|gb|EDU41447.1| inositol phosphosphingolipids phospholipase C [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 429

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 77/309 (24%), Gaps = 40/309 (12%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            +     +R++S N   L       +     +R T     +     +   DIV LQE  +
Sbjct: 5   ASQSPSSLRVISLNCWGL-----KFISTLRNERLTEIGVQIAA--ASPRPDIVGLQECWT 57

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAK 134
                 +  K    + Y                    + +  +   +      YPL G  
Sbjct: 58  QQDYNVIREKTQHILPYGKFYHSGIFGG--------GLVILSRWPIIESNMVRYPLNGRP 109

Query: 135 DSFSRAGNRRAVELLVE-------------INGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
            +F R     A    +              I      ++ + L                 
Sbjct: 110 AAFYRGDWFVAQAWEITKLMRGAAERGHLVIGMGDFNMVPLSLAHRIIETHSPVRDVWRI 169

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
                     KD + Q +   +P   +  FN  +N    + +            R  K +
Sbjct: 170 LHPESSIGAAKDKVEQLRGVPMP---SAQFNMTVNGATCDSELNSWRWNKQQQKRLTKGE 226

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNA-------YKFLIQESFSEILYNEDDIKSRGKRLSD 294
           + + +      N   +DY               +    E     +  E    +    LSD
Sbjct: 227 NVQIDPAVPDPNAKRLDYVFFSSGRYHNPETKEETAEWELKEANVGMEMRHPTLHCSLSD 286

Query: 295 HCPISIDYD 303
           H  +     
Sbjct: 287 HFSVEATLT 295


>gi|311063766|ref|YP_003970491.1| hypothetical protein BBPR_0334 [Bifidobacterium bifidum PRL2010]
 gi|310866085|gb|ADP35454.1| Conserved hypothetical membrane spanning protein [Bifidobacterium
           bifidum PRL2010]
          Length = 390

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/294 (9%), Positives = 77/294 (26%), Gaps = 32/294 (10%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +      L++ N                     +    +    +    D++ LQE+ 
Sbjct: 118 PPQASGDTYHLMTLNCRY----------------GKASADAIIAAVRERHIDVLALQEL- 160

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-----NVRVLQQSYPL 130
           S + + ++       I     R +   +  ++N     I  R K     +  V   +  +
Sbjct: 161 STDLIKRLERGGLHRIL--PYRQLGTPREKTDNGGFNGIWSRTKPKRGTHGIVSIPAADV 218

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ- 189
            G         +        +   +        ++S   L  +      + +   ++A  
Sbjct: 219 PGIMLQTDDGTSVAFASAHTKSPMRGCREWSDGIRSLSALVPMPRKSVSAGTGREERATG 278

Query: 190 -WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
                        +   V+ GD N  I++    +                         +
Sbjct: 279 SKAGRGGGSAYPDVDIAVLMGDLNADIDHASFRELLRSGFRDAALAQARGHV---NTFPS 335

Query: 249 KNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +    +I +D+ +   + +      E    + ++  +         DH  ++  
Sbjct: 336 QVPWPRIELDHIMAATRESASGSAAEPARAVAFSGVESFVVEDT--DHLALTAT 387


>gi|221120952|ref|XP_002165144.1| PREDICTED: similar to enoyl Coenzyme A hydratase, short chain, 1,
           mitochondrial [Hydra magnipapillata]
          Length = 887

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 54/240 (22%), Gaps = 46/240 (19%)

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           NA   +                   KR           +RK     LQ  +         
Sbjct: 204 NAERFILNDLAAPTHQVFFHCAGRKKRIRKTFWGKCFLIRKSLPLSLQVIHEDE------ 257

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                     +L          + ++L S           S S      Q   +   I  
Sbjct: 258 ---------HILAIKGSFVFIFIGVYLTS-------CRNTSNSLEKYMSQLSLINSIINT 301

Query: 198 KKESLVPFVIAGDFNRKI------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
            ++     +IAGDF                     +      ++ N+             
Sbjct: 302 YEDEGE-CIIAGDFQSFPENIYDTEIRNNKTRNNFSKYLSNFLELNELFFLDIINGTGPT 360

Query: 246 NANKNL--RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              K+    N   ID+  + + +                  I      +SDH PI  + +
Sbjct: 361 YTYKHRTLNNSPYIDHIAVLKESSICFTGC---------HVIPPSHLNMSDHLPIITNIN 411


>gi|147835100|emb|CAN61375.1| hypothetical protein VITISV_037805 [Vitis vinifera]
          Length = 1765

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/286 (11%), Positives = 80/286 (27%), Gaps = 68/286 (23%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++SWN+  L               + +   +++ + ++ + D V +QE    N   +   
Sbjct: 762 IISWNVRGLG--------------SRNKRRMVKDFLRSENPDXVMIQETKKENCDRRFVG 807

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                                 +     I +   +  + ++   +               
Sbjct: 808 S-------VXTXRNKDWVALPXSGASXGILIIWDSKNLRREEVVIGSFS----------- 849

Query: 146 VELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
           V +   ++G   +W+  ++  +   L             L+                   
Sbjct: 850 VSVKFSLDGCGPLWISTVYGPNSPSLTKDFWVELFDIYGLTYPL---------------- 893

Query: 205 FVIAGDFNR---------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255
           + + GDFN            +   +  DF   I   + L    +      +  +      
Sbjct: 894 WCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFIRECELLDPPLRNASFTWSNMQESPVCK 953

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +D F+                +L+ +   ++  +R SDH PI +D
Sbjct: 954 RLDRFLYSNE----------WGLLFPQGLQEALIRRTSDHWPIVMD 989


>gi|67902602|ref|XP_681557.1| hypothetical protein AN8288.2 [Aspergillus nidulans FGSC A4]
 gi|40739836|gb|EAA59026.1| hypothetical protein AN8288.2 [Aspergillus nidulans FGSC A4]
 gi|259481080|tpe|CBF74285.1| TPA: SacI domain and endonuclease/exonuclease/phosphatase family
           protein (AFU_orthologue; AFUA_7G03680) [Aspergillus
           nidulans FGSC A4]
          Length = 1106

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 83/303 (27%), Gaps = 38/303 (12%)

Query: 28  SWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQY----AKNLDADIVFLQEMGSYNAVA 81
           ++N+N         +S W             +          L    +   +  +  +  
Sbjct: 600 TFNVNGRVQGPGTDLSPWLFPEDNDQRKCPTIFAVGFQEIVTLSPQQIMSTDPTTRKSW- 658

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139
           ++   +      +      +    S   + TA+ +  R+  +R ++     +        
Sbjct: 659 ELAVMDCLNSRAAARGSPKYVLLRSGQLVGTALMIYVREDILRDIKNVEGSVKKTGLSGI 718

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQAQWLKDWITQK 198
           AGN+    +  E +  ++  +  HL +     D   N Y   C  L  Q         + 
Sbjct: 719 AGNKGGCAIRFEYSNTRLCFVTAHLAAGFANYDERNNDYETICQGLRFQR-------NRF 771

Query: 199 KESLVPFVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPKEKD 242
            E     +  GDFN +I                    +ND     +    +   + +   
Sbjct: 772 IEDHDAVIWLGDFNYRIGLPNQTVRDLVRQSNYQKLYDNDQLNLQMLAGRAFQFYSEGLV 831

Query: 243 SRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +     K        D            +  +  +      +    +   RLSDH P+  
Sbjct: 832 TFPPTYKYDVGSDTYD---TSDKSRIPAWCDRILWKGPDLRQSGYGASDMRLSDHRPVWA 888

Query: 301 DYD 303
            + 
Sbjct: 889 TFT 891


>gi|326330737|ref|ZP_08197041.1| PE-PGRS family protein [Nocardioidaceae bacterium Broad-1]
 gi|325951578|gb|EGD43614.1| PE-PGRS family protein [Nocardioidaceae bacterium Broad-1]
          Length = 324

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/288 (9%), Positives = 60/288 (20%), Gaps = 78/288 (27%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            S  + + +++     L E  G             D   + +  +    D++ +QE+   
Sbjct: 103 TSAGEPLTVMT---TNLFEGRG-------------DVDTVAETVRKHKVDVLAVQEITPE 146

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                      +    ST R     +        T   +         +           
Sbjct: 147 A----------YAKLSSTLRDQLPYRIGEAAPGTTGTMLFADQPITKARRLDTSMGSWVA 196

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                R  V                         +                    + I +
Sbjct: 197 DVGERRVVVA-----------------HPAPPTLASWPAEQ--------------ELIIK 225

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-----R 252
           +  +  P ++ GD N  +++                  R            +        
Sbjct: 226 EAAAEKPDLVLGDLNASLDHHTVRRLLDDA--DLSDAARASNAGWQPTWPTEGFAGVPLP 283

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               ID+ ++  +    L  E+                  SDH  +  
Sbjct: 284 PSAAIDHVLLGDDL-VALATETVEVS-------------GSDHLALVA 317


>gi|154490932|ref|ZP_02030873.1| hypothetical protein PARMER_00849 [Parabacteroides merdae ATCC
           43184]
 gi|154088680|gb|EDN87724.1| hypothetical protein PARMER_00849 [Parabacteroides merdae ATCC
           43184]
          Length = 338

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/356 (9%), Positives = 75/356 (21%), Gaps = 71/356 (19%)

Query: 2   IRKYVLALVFFLVPCT--ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           +R++ + L   ++ C       Q++R++  NI                      +  +  
Sbjct: 1   MRRFYIWLWLLMLVCGSCTKEKQELRVLHLNIWMEGTVVKNG------------FEAVAD 48

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               +D DIV   E  +                    R          + +  A+  +  
Sbjct: 49  EVARIDPDIVMFSEASNKE------GALFVPRMLDALRERGKIYYGQGSSLDVALLSKYP 102

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
            +   +          +      ++ V     ++            S      LE   + 
Sbjct: 103 ILEQTENIPHKDRVLRTRLDVNGKQVVAYTGHLDYTHYACYLPRGYSGVTWKKLEAPVTD 162

Query: 180 SCSLLSQQAQWLKD------WITQKKESLVPFVIAGDFNRKINYLGNN------------ 221
              +     + L+D           K      ++ GDFN   +                 
Sbjct: 163 KAEIEKANNESLRDESIRLVIEDATKSDADFVILGGDFNEPSHLDWTEETKGLWDHNGAV 222

Query: 222 -DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--------------------PIDYF 260
            D     +          + K      +                            ID+ 
Sbjct: 223 VDWVCSKLLYEAGFRDAYRVKYPNPITHPGFTFPSDNPAMPVERLTWAPEADERDRIDFI 282

Query: 261 VMDQNAYKFLIQESF------------SEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                    +                  E    +          +DH  + I + F
Sbjct: 283 YYIPATGWEVEDAVIVGPKSSIIRSQRVEEDSQDTFSTPADIWPTDHKGVLIKFKF 338


>gi|262280853|ref|ZP_06058636.1| endonuclease/Exonuclease/phosphatase [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257753|gb|EEY76488.1| endonuclease/Exonuclease/phosphatase [Acinetobacter calcoaceticus
           RUH2202]
          Length = 373

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/251 (10%), Positives = 60/251 (23%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL +  + L  D++   E               W             +     D  
Sbjct: 114 DKYHLLLEQIRTLKPDLLLTLESDKT-----------WENALKEIEEDYPHRVPVPLDNL 162

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   +L  +              +   +G  + +  +H K     +
Sbjct: 163 YGMHLYSRLPLSNTEVKFILSDEIPSIHT-------TVTLRSGMPVQLYCLHPKPPSPTE 215

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++T   +          L     Q K+     ++ GD N            ++ I   
Sbjct: 216 AKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS-- 262

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +    +K     
Sbjct: 263 GLLDPRVGRHFINTFHADYPLLRWSLDHIFHS--------------TDFGLVKMKRLPHI 308

Query: 292 LSDHCPISIDY 302
            SDH P+ +  
Sbjct: 309 GSDHFPVYVVL 319


>gi|328784245|ref|XP_396007.4| PREDICTED: hypothetical protein LOC412552 [Apis mellifera]
          Length = 458

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/199 (11%), Positives = 47/199 (23%), Gaps = 37/199 (18%)

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI------ 195
               +  +     +    + +      +     +       +LS + + + D        
Sbjct: 245 PCGLLYGVPSDPAQVQQPILVCTAHIHWDPEFCDVKLIQTMMLSNELRSILDQAGQSFRP 304

Query: 196 -TQKKESLVPFVIAGDFNRKINYLGN-------------------NDDFWKTIDPNDSLI 235
             +   S V  ++ GDFN   +                            + I   D   
Sbjct: 305 GHKPDSSNVQLLLCGDFNSLPDSGVIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPN 364

Query: 236 RFPKEKDSRC--------NANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDD 284
            F                  N     K  IDY    + +      L   S      ++  
Sbjct: 365 EFTHSFKLASAYSEDIMPYTNYTFEFKGIIDYIFYSKQSMVPLGLLGPLSADWFKEHKVV 424

Query: 285 IKSRGKRLSDHCPISIDYD 303
                   SDH P+ ++ +
Sbjct: 425 GCPHPHVPSDHFPLLVELE 443


>gi|271964143|ref|YP_003338339.1| hypothetical protein Sros_2626 [Streptosporangium roseum DSM 43021]
 gi|270507318|gb|ACZ85596.1| hypothetical protein Sros_2626 [Streptosporangium roseum DSM 43021]
          Length = 347

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/254 (10%), Positives = 57/254 (22%), Gaps = 57/254 (22%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
           D     Q      AD++ L+E                 ++ +     +  +         
Sbjct: 142 DPAGTAQALARTGADLIALEE----------LTPGALPVYGAAFAAGHPHRAVVGT---- 187

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLD 171
            + +  +   V      +         +     +   V      + V   HL S      
Sbjct: 188 -VGLWSRYPLVDSGPVDIRPEGIGAEWSR---GLRSTVRAPHGDMAVYVAHLPSVRIRPR 243

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
               +     S ++  A    + +          ++ GD N               +D  
Sbjct: 244 DGFGSGPRDESAVALGAAIAAERLET-------VILLGDLNGT-------------LDDR 283

Query: 232 DSLIRFPKEKDSRCNANKNLR---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                  +   +   A  +         ID+ +            +   +          
Sbjct: 284 GLAPVTSRMTPAVAGAGFSWPAAFPVARIDHIMARAA-----TPVTTWTLPAT------- 331

Query: 289 GKRLSDHCPISIDY 302
               SDH PI+   
Sbjct: 332 ---GSDHLPIAARI 342


>gi|158259675|dbj|BAF85796.1| unnamed protein product [Homo sapiens]
          Length = 901

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 283 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 403 NQTLPQLNIMKHEVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 462

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 463 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 514

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 515 SH----MELKTSDHKPVSA 529


>gi|270263400|ref|ZP_06191669.1| putative endonuclease/exonuclease/phosphatase family protein
           [Serratia odorifera 4Rx13]
 gi|270042284|gb|EFA15379.1| putative endonuclease/exonuclease/phosphatase family protein
           [Serratia odorifera 4Rx13]
          Length = 257

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 86/288 (29%), Gaps = 71/288 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
             A  +R++ WNI                ++     ++L+ Y K  DA +V LQE  +  
Sbjct: 28  PTAGALRVMVWNIF--------------KQQRADWLSVLKNYGK--DAQLVLLQEAQTTP 71

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +      N                  ++     A+      V  L  ++P+        
Sbjct: 72  ELVSFATAN---------------YLAADQVPAFALPQHPSGVMTLAAAHPVYCCPLRER 116

Query: 139 RAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R A   L+ +    NG+ + V++IH  +F     + +             + L   
Sbjct: 117 EPLLRLAKSALITVYPLFNGQLLMVVNIHAVNFSLGVDVYS-------------KQLGPI 163

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             Q      P ++AGDFN         +  ++                   + ++     
Sbjct: 164 GEQIANHHGPVIMAGDFNAW--SRKRINALYQFASDMALREVNF------TDDHRRKAFG 215

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            P+D+          + + S                  SDH P+ +++
Sbjct: 216 RPLDFVFYRNMG---VAEASVLVTS------------ASDHNPLLVEF 248


>gi|222637558|gb|EEE67690.1| hypothetical protein OsJ_25350 [Oryza sativa Japonica Group]
          Length = 486

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 71/310 (22%), Gaps = 84/310 (27%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQ-----EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
                 + +  + + ADI+ LQ     E    + ++++         ++      +    
Sbjct: 170 EGRRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEY---- 225

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
                    AV  +      +S  +    D F  +  R        +  K   +L++   
Sbjct: 226 -------GNAVLSRWPIKRWKSQRVADQSD-FRCSKVRYVRAKNFRVESKHGLILNVDNH 277

Query: 166 -------------------------SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                                    +        +      S   +Q   +         
Sbjct: 278 LSDRSKKCLYFEMKNVLRATIEVPRAGEVNFHCTHLDHLDESWRMKQMNAILR------S 331

Query: 201 SLVPFVIAGDFNR-KINYLGNNDD------------------FWKTIDPNDSLIRFPKEK 241
           S  P ++ G  N        +                       K +     +       
Sbjct: 332 SDGPHILTGGLNALDGTDYSDERWADIVKYYEEIGKPTPKAEVMKYLKGKQYVDAKDFAG 391

Query: 242 D--------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +           +     +    +DY +   N+    +  S++ I              S
Sbjct: 392 ECEAVVVVAKGQDVQGTCKYGTRVDYILASPNSPYKFVPGSYTVISSKGT---------S 442

Query: 294 DHCPISIDYD 303
           DH  + +D  
Sbjct: 443 DHHIVKVDVT 452


>gi|55742460|ref|NP_001007031.1| synaptojanin-1 [Danio rerio]
 gi|53854784|gb|AAU95736.1| synaptojanin 1 [Danio rerio]
          Length = 1308

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 94/346 (27%), Gaps = 67/346 (19%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-----AKNLDADI--V 69
           +  +K+R+   +WN+N   +   ++   +++     D     ++      KN   DI  +
Sbjct: 533 TRPKKIRVCVGTWNVNGGKQFRSIAFRNHTLNDWLLDAPKKARHPEFQDVKNNPVDIFAI 592

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNV 121
             +EM   NA   V    T    ++ E   N S+      + +         + +R ++ 
Sbjct: 593 GFEEMVELNAGNIVSASTTNQKLWAAELQKNISRDQRYVLLASEQLVGVCLFVFIRPQHA 652

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             ++               GN+  V + +  +   I  +  H  +        N      
Sbjct: 653 PFIRDVAVDTVKTGMGGATGNKGGVAIRMLFHTTSICFVCSHFAAGQSQVKERNDDYNEI 712

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN----------------DDFW 225
                 A+ L   + +   S       GDFN +IN                     D   
Sbjct: 713 ------ARKLSFPMGRLLYSHDYVFWCGDFNYRINIPNEEVKELIRQQNWDALIGGDQLV 766

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQE 273
           +  +       F + K       K                    D  +  +  + F    
Sbjct: 767 EQKNAGQVFRGFIEGKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWKRRKWNFDKTA 826

Query: 274 SFSEILYNEDDIKSRGKRL----------------SDHCPISIDYD 303
              E+      +    +                  SDH P+    D
Sbjct: 827 EELELNVVGAPVNEEEQYPWSPGDLKYYGRAELKTSDHRPVVAIID 872


>gi|13325072|ref|NP_000267.2| inositol polyphosphate 5-phosphatase OCRL-1 isoform a [Homo
           sapiens]
 gi|67477390|sp|Q01968|OCRL_HUMAN RecName: Full=Inositol polyphosphate 5-phosphatase OCRL-1; AltName:
           Full=Lowe oculocerebrorenal syndrome protein
 gi|13254464|gb|AAB03839.2| ocrl1 [Homo sapiens]
 gi|57208841|emb|CAI42616.1| oculocerebrorenal syndrome of Lowe [Homo sapiens]
 gi|57209431|emb|CAI41088.1| oculocerebrorenal syndrome of Lowe [Homo sapiens]
 gi|66347006|emb|CAI95695.1| oculocerebrorenal syndrome of Lowe [Homo sapiens]
 gi|119632237|gb|EAX11832.1| oculocerebrorenal syndrome of Lowe, isoform CRA_c [Homo sapiens]
          Length = 901

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 283 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 403 NQTLPQLNIMKHEVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 462

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 463 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 514

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 515 SH----MELKTSDHKPVSA 529


>gi|255532873|ref|YP_003093245.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255345857|gb|ACU05183.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 620

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 70/279 (25%), Gaps = 54/279 (19%)

Query: 51  TSDYTLLRQYAKNL---DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
              +  L             I+ LQE+            +   +  +        +  S 
Sbjct: 366 DDAFEELANLLSTEFSGQYGIICLQEV----------NPSILDLIKTKLGGAWDYEYYSP 415

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 I           Q +        +     R A+     +  K +WV++ HL   
Sbjct: 416 TGTTHGIGTLSNIAYTKLQLWDYP----QYGTKEKRGAIAQKFLLQNKFVWVVNTHLGL- 470

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK------------I 215
                         +   QQ   +            P  I GDFN               
Sbjct: 471 ------------DEAERVQQVGEIITRYQTF-TQTTPVAIVGDFNITDRYRHGSSVTITP 517

Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQ 272
               + ++  + +  +          + R  +  +     N I +DY +   +    +  
Sbjct: 518 GQESHYNNTIQALINSGLEKLDYYSTEVRPYSFHSWNAISNGIIVDYILWKDSINNTIPD 577

Query: 273 ESFSE--------ILYNEDDIKSRGKRLSDHCPISIDYD 303
            S                 +I S  +  SDH  I +D++
Sbjct: 578 VSNWRPGPFNAGWTNSVCPNILSGSRFASDHNGILLDFN 616


>gi|16760658|ref|NP_456275.1| toxin-like protein [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29141583|ref|NP_804925.1| toxin-like protein [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|194734538|ref|YP_002114253.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197301161|ref|ZP_02664211.2| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204930807|ref|ZP_03221680.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|213580090|ref|ZP_03361916.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213609943|ref|ZP_03369769.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213646139|ref|ZP_03376192.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213855310|ref|ZP_03383550.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289828552|ref|ZP_06546394.1| cytolethal distending toxin subunit B homolog [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|57012710|sp|Q8Z6A7|CDTB_SALTI RecName: Full=Cytolethal distending toxin subunit B homolog;
           Short=CDT B; AltName: Full=Deoxyribonuclease CdtB;
           Flags: Precursor
 gi|25355596|pir||AG0718 probable toxin-like protein cdtB [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16502954|emb|CAD02120.1| putative toxin-like protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137210|gb|AAO68774.1| putative toxin-like protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|110747138|gb|ABG89388.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|194710040|gb|ACF89261.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197288115|gb|EDY27502.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204320266|gb|EDZ05470.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|322616630|gb|EFY13539.1| cytolethal distending toxin subunit B protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619855|gb|EFY16729.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622423|gb|EFY19268.1| cytolethal distending toxin subunit B protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322627947|gb|EFY24737.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632955|gb|EFY29698.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636799|gb|EFY33502.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641390|gb|EFY38029.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645165|gb|EFY41694.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650106|gb|EFY46520.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655680|gb|EFY51982.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660004|gb|EFY56243.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665428|gb|EFY61616.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667594|gb|EFY63755.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673612|gb|EFY69714.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677538|gb|EFY73602.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679797|gb|EFY75836.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687270|gb|EFY83242.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192387|gb|EFZ77617.1| cytolethal distending toxin subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199465|gb|EFZ84558.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203653|gb|EFZ88675.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208804|gb|EFZ93742.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323214144|gb|EFZ98904.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217780|gb|EGA02495.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323224980|gb|EGA09236.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229583|gb|EGA13706.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232806|gb|EGA16902.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240156|gb|EGA24200.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242857|gb|EGA26878.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323247789|gb|EGA31728.1| cytolethal distending toxin subunit CdtB [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323256105|gb|EGA39842.1| cytolethal distending toxin subunit CdtB [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323259427|gb|EGA43063.1| cytolethal distending toxin subunit B [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267023|gb|EGA50508.1| cytolethal distending toxin subunit CdtB [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272127|gb|EGA55541.1| cytolethal distending toxin subunit CdtB [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 269

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 83/306 (27%), Gaps = 52/306 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M +     L   +    +     +   ++++WN+         S             +  
Sbjct: 1   MKKPVFFLLTMIICSYISFACANISDYKVMTWNLQG----SSASTESKWNVNVRQLLSGT 56

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                    DI+ +QE G+    A    ++                  + +         
Sbjct: 57  AGV------DILMVQEAGAVPTSAVPTGRHIQPFGVGIPIDEYTWNLGTTSRQDIRYIYH 110

Query: 118 KKN-VRVLQQSYPLLGAKDSFSRAGNRRAVEL---LVEINGKKIWVLDIHLKSFCFLDSL 173
               V   + +  ++  + + +    R        ++ I       L  H  +    D+ 
Sbjct: 111 SAIDVGARRVNLAIVSRQRADNVYVLRPTTVASRPVIGIGLGNDVFLTAHALASGGPDAA 170

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                        Q + L             + +AGDFNR  + L  ND   + ++   +
Sbjct: 171 AIVRVTINFFRQPQMRHLS------------WFLAGDFNRSPDRL-ENDLMTEHLERVVA 217

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDY-FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           ++   +                 +DY  ++D+  Y   +            +     +  
Sbjct: 218 VLAPTEPTQIGGGI---------LDYGVIVDRAPYSQRV------------EALRNPQLA 256

Query: 293 SDHCPI 298
           SDH P+
Sbjct: 257 SDHYPV 262


>gi|325182835|emb|CCA17290.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 356

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/349 (9%), Positives = 84/349 (24%), Gaps = 75/349 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVA 81
            + ++ +N+   +E   V      +KR       +     +    D++   E    + + 
Sbjct: 2   SMHVIQYNVFGRTEMLSVDGQIERLKRIPESL--IANSPNSFIPIDVISFAEFFEQDQLE 59

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  K     F  + R+++  +    +  +  + +  +   + +       A        
Sbjct: 60  IMAEKFKELGFPYSTRILSDPEPL-RSFTNGGVWIVSRWEILKEAQIIYRNACHYGDCLA 118

Query: 142 NRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKK 199
            +      +    +    V +I         + +           +QA  ++ ++  Q  
Sbjct: 119 AKGVKYARIVKTERGFSKVYNIFATHLQAWSTEKARD-----ARVKQAHQMRQFVKEQNI 173

Query: 200 ESLVPFVIAGDFNRKINYLG---------------------------------------- 219
            +    + AGDFN                                               
Sbjct: 174 STSEAILFAGDFNVDNVSYPGEVRSLMEILGSKVPFRIGVEKYTSDPRSNVLVGRDGAAS 233

Query: 220 ----NNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKIPIDYFV-MDQNAYKFLI 271
               +   F        +      +    C           K  +DY         + ++
Sbjct: 234 YDGCSKSYFASWGQNEGNTYHPSDKTRQPCGKDYCYCPCCPKEWLDYVFHAQAPYLQPVV 293

Query: 272 QESFSEILYNEDDIKSRGKR----------------LSDHCPISIDYDF 304
           Q +            +                    LSDH P+S  + F
Sbjct: 294 QPTIQAFTNKVQPFIAEWAGSSFLPEWMKGHIELTDLSDHYPVSTVFTF 342


>gi|16758394|ref|NP_446057.1| sphingomyelin phosphodiesterase 3 [Rattus norvegicus]
 gi|2564001|dbj|BAA22932.1| CCA1 protein [Rattus norvegicus]
          Length = 635

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 57/198 (28%), Gaps = 21/198 (10%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           + D + LQE+    A AK+  +    +        +       +   +++ +    +   
Sbjct: 354 NLDFLCLQEVFDKRAAAKLKEQLHGYFEYILYDVGVYGCHGCCNFKCLNSGLFFASRYPV 413

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
           +   +Y       SF    ++ A+ L V++         +   +   L +         +
Sbjct: 414 MDV-AYHCYPNGCSFDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPP----EDSA 468

Query: 183 LLSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINYLGNNDDFWKTIDP 230
           +  +Q   L+DW+   ++S                VI GD N         D   +    
Sbjct: 469 IRCEQLDLLQDWLADFRKSTSSTSTANPEELVVFDVICGDLNFDNCSSD--DKLEQQHSL 526

Query: 231 NDSLIRFPKEKDSRCNAN 248
                   +         
Sbjct: 527 FTRYKDPCRLGPGEEKPW 544


>gi|18677024|dbj|BAB85079.1| unnamed protein product [Homo sapiens]
          Length = 535

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 57/218 (26%), Gaps = 25/218 (11%)

Query: 24  VRLVSWNINT-------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +R VS+NI          S                    L+++     +AD++ LQE+  
Sbjct: 295 IRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDR 354

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKKN------------VRV 123
                 + P           R+  H    +       ++  +                 +
Sbjct: 355 AVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKEL 414

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           L++      A++   +  +   V +L         +   +   +                
Sbjct: 415 LEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVA 474

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
           L          ++      +P +  GDFN   +    +
Sbjct: 475 L-----AHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYH 507


>gi|159480918|ref|XP_001698529.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158282269|gb|EDP08022.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 413

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 67/280 (23%), Gaps = 47/280 (16%)

Query: 53  DYTLLRQYAKNL--DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
                 +Y +N   D DIVFLQE+ +   V  +            +  + H         
Sbjct: 9   RLGRQAEYFRNEGRDLDIVFLQEVWTPEYVKLLSDA-------GADAGLTHITTFDGGVF 61

Query: 111 HTAIAVRKKNVRVLQQSYPL-----LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
              + +  +                 GA +  + AG       +V  +G  + + + H  
Sbjct: 62  GAGLMLMSRYPITDLAFRTFSVRGEPGALEGEAMAGKGIGYARVVLPSGSAMHLFNTHTH 121

Query: 166 SFCFLDSLENTYSPSCS------------LLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
           +        +   P                +     ++K  +     +      AGD+N 
Sbjct: 122 ANWVHSVKADEQLPDVKVPTDSFAPFRTAHMLDAVAFMKPIVEAAAAAGELVFAAGDWNV 181

Query: 214 KINYLG--NNDDFWKTIDP----NDSLIRFPKEKDSRCNANKNLRN------KIPIDYFV 261
             + L           +             P+     C  N    +         ID+  
Sbjct: 182 PYDNLEACLLQSLLPCLKDSWQAAGHAPLDPEGNTCGCPTNVYTGSIIGGYVPERIDFIW 241

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                                  +       SDH  + + 
Sbjct: 242 ---------TNAHVLSCEAVLRRMPGTELNYSDHHAVQVT 272


>gi|51246319|ref|YP_066203.1| hypothetical protein DP2467 [Desulfotalea psychrophila LSv54]
 gi|50877356|emb|CAG37196.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 279

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 78/285 (27%), Gaps = 65/285 (22%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
                RL+ WNI           +K        +           DAD+V LQE    + 
Sbjct: 57  SGDSFRLLVWNI-----------YKEQKPGWEKELATFAG-----DADLVALQEGALTSE 100

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           +A    +       +           S     + +    +           L  ++    
Sbjct: 101 LAGSLTERDMAWQQAQ--------AFSYEGADSGVVTASQASPQES----CLLREEESII 148

Query: 140 AGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              + A+     +NG + +  +++HL +F       +           Q + +   +   
Sbjct: 149 GLPKTALLSRYSLNGEQDLLFVNLHLVNFSLGVEGYSR----------QLEKIYQVLVHH 198

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P V+AGDFN          D +        +I    ++ S    N        +D
Sbjct: 199 SG---PIVVAGDFNTWSERRQEVVDAFAADLDLAPVIFSDDKRISVFGRN--------LD 247

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +    +             +              SDH P+ +D+ 
Sbjct: 248 HV-YSRGLTVLAS----KVLPAKS----------SDHNPMLVDFS 277


>gi|317125305|ref|YP_004099417.1| endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
 gi|315589393|gb|ADU48690.1| Endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
          Length = 343

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 79/298 (26%), Gaps = 61/298 (20%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           +AL  +    +      + +++ N++                   +D   +    +    
Sbjct: 95  IALPSWFAETSPDAPLDLTVMAVNLSF----------------GRADAEQVADAVRAEAV 138

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           D++   E+      A                    S        +T   V  +       
Sbjct: 139 DVLVATEVTPEALAALDEAGLDQWFIEEVGETRPES--------YTGTMVFSRFPATE-- 188

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                  +D           E++V++ G  + V  +H+ +    D++             
Sbjct: 189 ----TTGEDPVDAHTPSLQPEVVVDVTGTAVRVKAVHVPAPLAGDTV---------EWRA 235

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             + L  W  +++ S  P ++AGDFN    +      F  T +  D   +       R  
Sbjct: 236 ALRALATWRDRQEGS-EPVLLAGDFNASRGHP----AFRHTAEGFDDAHQVAGLGWVRTW 290

Query: 247 ANKNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                R    I  D+ ++ +         +                   DH  +   Y
Sbjct: 291 PFVGQRVPPYIQLDH-LLSRGLTVVEAGSTAIHGT--------------DHAIVWATY 333


>gi|309798809|ref|ZP_07693073.1| exodeoxyribonuclease III [Streptococcus infantis SK1302]
 gi|308117626|gb|EFO55038.1| exodeoxyribonuclease III [Streptococcus infantis SK1302]
          Length = 217

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/237 (9%), Positives = 54/237 (22%), Gaps = 50/237 (21%)

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
            +        S ++     +       K       S+P +GA  S   +  R      + 
Sbjct: 5   LFPGYENTWRSSQEPARKGYAGTMFLYKKELTPSISFPEIGAP-STMDSEGRI-----IT 58

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
           +     +V  ++  +                  ++    L        +     +  GD+
Sbjct: 59  LEFDTFFVTQVYTPNAGDGLKRLEDRQVWDVKYAEYLAQL--------DKQKSVLATGDY 110

Query: 212 N---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254
           N               R   +     + +  +        F                +  
Sbjct: 111 NVAHKEIDLANPASNRRSPGFTDEEREGFSNLLAKGFTDTFRHIHGDVPERYTWWAQRSK 170

Query: 255 --------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                     IDY++        + +    +    +           DH PI ++ +
Sbjct: 171 TSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ-----------DHTPIVMEIE 216


>gi|317055177|ref|YP_004103644.1| hypothetical protein Rumal_0457 [Ruminococcus albus 7]
 gi|315447446|gb|ADU21010.1| hypothetical protein Rumal_0457 [Ruminococcus albus 7]
          Length = 263

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 73/282 (25%), Gaps = 41/282 (14%)

Query: 26  LVSWNINTLSEQ-------EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           + SWN+N                         +     +  Y  N D DIVF+ E     
Sbjct: 2   ITSWNVNEFCGGEEAAINISYKEKCNIWKVNGSRYIEKIISYLNNKD-DIVFINEF---K 57

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            V  +          ++  + N+    +      A  +  + +             + F 
Sbjct: 58  GVKSIVNTLENRYEIASYPIGNNKFVTAAIFSKGAYKLYGEKIL-----------DEEFG 106

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              NR       +   + I+ + I                 S  L +   +  +      
Sbjct: 107 SFRNRVIAVQRKDDPTQIIFGIHI-------PTYDPTDKHTSIELWNSIIRVHRRLHE-- 157

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                  +  GD N  I    N    ++ +             D   + +        ID
Sbjct: 158 --DNRSVIYIGDINTYIPGTVNKSKLYEFMSEGLVDFWIETGHDHNEHTS---NFNTRID 212

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           Y ++    +  L ++          D   R   LSDH  I +
Sbjct: 213 YALVTGKDFDKLNKK-----YDMTVDHTVRVNGLSDHSAIIL 249


>gi|115752556|ref|XP_789838.2| PREDICTED: similar to inositol polyphosphate phosphatase-like 1
           [Strongylocentrotus purpuratus]
 gi|115950885|ref|XP_001186835.1| PREDICTED: similar to inositol polyphosphate phosphatase-like 1
           [Strongylocentrotus purpuratus]
          Length = 1327

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 91/308 (29%), Gaps = 35/308 (11%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+        ++ W        +  + L       D  ++  QE  +   + V ++
Sbjct: 406 IGTWNMGDAPPPNCITTWLTCQGDGKTRDSRLVYM--PHDLYVIGTQESTLSERDWVNRL 463

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +         E+  +     S   I  A+ V+ ++   +             +  GN+
Sbjct: 464 KVEIQNICRVPGEKEYSVVTVCSLWGIRIAVLVKPEHQDRISHVRESSVKTGIANALGNK 523

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV +    NG     ++ HL S           + +   + +        ++    +  
Sbjct: 524 GAVGVSFSFNGTSFCFVNCHLTSG---TEKCTRRNNNFHDILRGLSLGAKGLSLFDLNNQ 580

Query: 204 --PFVIAGDFNRKINY----------LGNNDDFW-----KTIDPNDSLIRFPKEKDSRCN 246
                  GD N +I++           G+ +  +     K       +    +E D    
Sbjct: 581 FHHIFWLGDLNYRIDWNVQEILTNIKSGHYEVLFNHDQLKIEKDQGKVFVAFEEDDITFP 640

Query: 247 ANKNLRNKIPIDY---------FVMD-QNAYKFLIQESFSE-ILYNEDDIKSRGKRLSDH 295
                       Y           ++  +    ++ +S+ +  + N     +     SDH
Sbjct: 641 PTYRYELGHRSTYAYKKIKKTGIRINQPSWCDRVLWKSYPDTHIINTTYGCTTDIVSSDH 700

Query: 296 CPISIDYD 303
            P+   +D
Sbjct: 701 SPVFSTFD 708


>gi|229820022|ref|YP_002881548.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
 gi|229565935|gb|ACQ79786.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
          Length = 672

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/406 (9%), Positives = 87/406 (21%), Gaps = 109/406 (26%)

Query: 5   YVLALVFFLVPCTASVAQ-----------------KVRLVSWNINTLSEQEGVSLWKNSV 47
             +A +   +  T + A                   +R+ ++N  +L+      L  +  
Sbjct: 14  LAVAALGLTLAVTPAAAGGGGSGGGSGGGSGGGGPSLRVATFN-ASLNRAAAGELVADLS 72

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
               +    + +  +    D+V L E      +    +F  N   +       I +    
Sbjct: 73  TPDDAQAATIAEILQRNRPDVVLLNEFDYVPDHVAVDLFRDNYLEVSQGGAEPIEYPYAY 132

Query: 106 SN-----------------------------NDIHTAIAVRKKNVRVLQQS--------- 127
                                           +    + V  +   V +           
Sbjct: 133 VAPSNTGIPSGFDLNNDGTVGGGDDALGFGLFEGQYGMVVLSRYPIVERDVRTFQTFLWK 192

Query: 128 ------YPLLGAKDSFSRAGNRRAVELL-----------VEINGKKIWVLDIHLKSFCFL 170
                  P   A    +       ++++           V +    + VL  H     F 
Sbjct: 193 DMPGALLPDDPATPEPADWFTPEELDVVRLSSKSHWDVPVRVGRDTVHVLASHPTPPTFD 252

Query: 171 DSLENTYSPSCSLLSQQAQWL-----------KDWITQKKESLVPFVIAGDFNRKINYLG 219
              +     +   +   A ++            D           FV+ GD N       
Sbjct: 253 GPEDRNGLRNHDEIRFWADYVTPGRASRYIVDDDGERGGLSRNASFVVVGDQNADPLDGD 312

Query: 220 NNDDFWKTIDPNDSLIRF------------------PKEKDSRCNANKNLRNKI----PI 257
           + D     +  +  +                                 +  +        
Sbjct: 313 SVDAAIDQLLDHRWITDPLPTSDGAVEAASLQGGANTAHAGDPAYDTADFADTAPGNLRA 372

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS-DHCPISIDY 302
           DY +  ++         +         +       S DH  + +D 
Sbjct: 373 DYVLPSRDLRVRDAGVFWPVAADPLSRLTGVFPFPSSDHRLVWVDL 418


>gi|262067967|ref|ZP_06027579.1| endonuclease/exonuclease/phosphatase family protein [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378368|gb|EFE85886.1| endonuclease/exonuclease/phosphatase family protein [Fusobacterium
           periodonticum ATCC 33693]
          Length = 886

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 88/317 (27%), Gaps = 40/317 (12%)

Query: 23  KVRLVSWNIN-----TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              +  +N        L+    +     + K        ++ Y      DI  + E+   
Sbjct: 571 DFTVAFFNTQLQSTDNLNNNFPIKDKDKATKNLLFKEKTVKNYITET-FDITLMVEIYDG 629

Query: 78  NAVA----KVFPKNTWCIFYSTER---------------LINHSKRDSNNDIHTAIAVRK 118
                   K+    T+  +                              +     ++   
Sbjct: 630 FNKEVNGTKLISDYTYKSYIKNIEPENNSSEILGPLFTNHHGSEYGVIFSKNKNRVSKLH 689

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
           K+  V +         +  +    R  VE +++I+   + V  +H+  F       +   
Sbjct: 690 KSGVVEKVVISKDNNGNLKTEPRERNFVETIIDISELNMPVSKLHVFWFHNFYGASDYDV 749

Query: 179 PSCSLLSQQAQWLKDWITQKKESLV---PFVIAGDFNRKI---NYLGNNDDFWKTIDPND 232
              S+  +    +   + Q+          ++ GD N ++      G       ++  N 
Sbjct: 750 DDISVRRKFISNILKVMQQRLNENKGNVATILMGDCNLQLFNFGERGIKKHIGDSVLNNY 809

Query: 233 SLIRFPKEKDS-------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             +     KDS           +     K   D  V+ +N  +  +   F    YN    
Sbjct: 810 YYVLPEAYKDSLYVKLSEATTIDTKGELKNAFDNIVVSKNLIEGEMSNYFYASTYNYPV- 868

Query: 286 KSRGKRLSDHCPISIDY 302
               + +SDH PI I +
Sbjct: 869 -ENKRMVSDHIPIYIGF 884


>gi|168488270|ref|ZP_02712469.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|221231411|ref|YP_002510563.1| integral membrane protein (possible nuclease activity)
           [Streptococcus pneumoniae ATCC 700669]
 gi|183573051|gb|EDT93579.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|220673871|emb|CAR68375.1| putative integral membrane protein (possible nuclease activity)
           [Streptococcus pneumoniae ATCC 700669]
 gi|332074394|gb|EGI84870.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA17570]
          Length = 333

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +   ++  + ++LV+WN+                     +   + +   + DAD+    E
Sbjct: 95  LSSASNKTKTLKLVTWNVAN-----------------QIEAQHIERIFSHFDADMAIFPE 137

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           + +     +   +           + N+    ++   ++ IA        +         
Sbjct: 138 LATNIRGEQENQRIKLLFHQVGLSMANYD-IFTSPPTNSGIA-----PVTVIVKKSYGFY 191

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            ++ +    R    +L         ++ +H                   L+    Q L  
Sbjct: 192 TEAKTFHTTRFGTIVLHSRKQNIPDIIALHTAPPLPG------------LMEIWKQDLNI 239

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              Q        +IAGDFN  +     +    K     D+L   P  +    N+      
Sbjct: 240 IHNQLASKYPKAIIAGDFNATM----RHGALAKISSHRDALNVLPPFERGTWNSQSPKLF 295

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ID+ ++ +N              Y   D+     + S+H  I  +  F
Sbjct: 296 NATIDHILLPKNH-------------YYVKDLDIVSFQNSNHRCIFTEITF 333


>gi|115908401|ref|XP_001201354.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus]
 gi|115935692|ref|XP_001196610.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus]
          Length = 242

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 36/208 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
            RL+SWNI+ L E+                          L  D+VFLQE+         
Sbjct: 27  FRLMSWNIDGLDERN-----------AEERTGAACDTIMKLAPDVVFLQEVV-------- 67

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
               T  +  +           ++   +T   V+  +   +  S          +    R
Sbjct: 68  --PTTHTLLKARLSSKYTIHAANSIGYYTCTLVKNSSESCITTSLVQP----FSNTKMGR 121

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +        + +++ HL+S             +   L Q  Q L +   Q ++   
Sbjct: 122 NLLIVNASYKNMYLSLMNTHLESTGP---------AAAERLLQFQQALGEM--QIQDPDR 170

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                GD N +       + +   ++ +
Sbjct: 171 VVFFGGDTNLRDKEACYKNIYLSLMNTH 198


>gi|13325070|ref|NP_001578.2| inositol polyphosphate 5-phosphatase OCRL-1 isoform b [Homo
           sapiens]
 gi|25535929|pir||G59431 phosphatidylinositol polyphosphate 5-phosphotase, isoform b
           [imported] - human
 gi|57208840|emb|CAI42615.1| oculocerebrorenal syndrome of Lowe [Homo sapiens]
 gi|57209430|emb|CAI41087.1| oculocerebrorenal syndrome of Lowe [Homo sapiens]
 gi|66347007|emb|CAI95696.1| oculocerebrorenal syndrome of Lowe [Homo sapiens]
 gi|119632236|gb|EAX11831.1| oculocerebrorenal syndrome of Lowe, isoform CRA_b [Homo sapiens]
 gi|120660444|gb|AAI30613.1| Oculocerebrorenal syndrome of Lowe [Homo sapiens]
          Length = 893

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 283 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 403 NQTLPQLNIMKHEVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 462

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 463 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 514

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 515 SH----MELKTSDHKPVSA 529


>gi|289612237|emb|CBI60149.1| unnamed protein product [Sordaria macrospora]
          Length = 223

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/256 (10%), Positives = 66/256 (25%), Gaps = 68/256 (26%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79
             + + SWNIN                       ++ Q+ +    D++ LQE  + + + 
Sbjct: 24  DTLSVASWNIN----------------SVRFRMDIVEQFLREAQPDVLCLQETKVENRDF 67

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                 +  +                +   +H  +AV  K               ++   
Sbjct: 68  PHDPLRRLGYSHIA-----------INGQRMHHGVAVISKVPLAEDDRLDWQANGEARH- 115

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
            G R A  L +E         ++++ +   +               Q+  +L+  I   K
Sbjct: 116 LGVRLANGLRIE---------NVYIPAGGDVPD-----REVNPKFGQKLDFLERMIDWSK 161

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---- 255
            S  P                 +   +    ND +    +   +          +     
Sbjct: 162 VSHTPI--------------EVETLARLQAANDWIDLGRQFVPAPQRLYTWWSYRAKDWA 207

Query: 256 ------PIDYFVMDQN 265
                  +D+    ++
Sbjct: 208 ASDRGRRLDHMWASRD 223


>gi|172040107|ref|YP_001799821.1| putative exodeoxyribonuclease [Corynebacterium urealyticum DSM
           7109]
 gi|171851411|emb|CAQ04387.1| putative exodeoxyribonuclease [Corynebacterium urealyticum DSM
           7109]
          Length = 344

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/250 (12%), Positives = 62/250 (24%), Gaps = 47/250 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
             + + N+N +     V    N           +  +     AD+V +QE+ +  A    
Sbjct: 3   FTVATVNVNGIRAAAKVRHENN---------QGILPWLAAHPADVVLMQEVRADEAQTAK 53

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---------SYPLLGAK 134
                    +   +                +A+  +      Q          YP     
Sbjct: 54  AIAPALEDGWHLAQAPA------AAKGRAGVAILSRLPLQDVQIGFGHEANPEYPGAEEA 107

Query: 135 DSFSRAGNRRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                   R     V+  V  + + I V  ++L S                 L   A ++
Sbjct: 108 AREFDGSGRYIEATVDAEVGGSTQPITVASLYLPSGASGTE---KQDEKFRFLDAFAPFM 164

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                  +      +I GD+N         +                  K +R  +    
Sbjct: 165 HQRAAAAEAGGQQMLIGGDWNICHRRADLKNW-----------------KPNRNKSGFLP 207

Query: 252 RNKIPIDYFV 261
             +  +D+ +
Sbjct: 208 AERAFLDHVL 217



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/125 (9%), Positives = 26/125 (20%), Gaps = 16/125 (12%)

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
           Q    +D       +       G  + +   L                            
Sbjct: 226 QVGDAEDSGRAGNPAGAAEDFFGAVDYQPGELAQARIAAGAATQPGWHDAVRHLHPDEDG 285

Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                  +           ID   +     +          +   D   +  +R SDH P
Sbjct: 286 PYSWWSYRGKAFDTNAGWRIDLHAVTGGLLE-------HTTVARVDKAPTYDQRWSDHSP 338

Query: 298 ISIDY 302
           + +++
Sbjct: 339 VILEF 343


>gi|168277406|dbj|BAG10681.1| inositol polyphosphate-5-phosphatase OCRL-1 [synthetic construct]
          Length = 902

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 239 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 283

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 284 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 343

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 344 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 403

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 404 NQTLPQLNIMKHEVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 463

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 464 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 515

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 516 SH----MELKTSDHKPVSA 530


>gi|13249985|gb|AAA59964.2| Lowe oculocerebrorenal syndrome protein [Homo sapiens]
          Length = 968

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 313 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 357

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 358 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 417

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 418 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 477

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 478 NQTLPQLNIMKHEVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 537

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 538 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 589

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 590 SH----MELKTSDHKPVSA 604


>gi|190893073|ref|YP_001979615.1| endonuclease/exonuclease/phosphatase family protein [Rhizobium etli
           CIAT 652]
 gi|190698352|gb|ACE92437.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CIAT 652]
          Length = 316

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 61/245 (24%), Gaps = 56/245 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
            RL+S+NI             N    T      L     + +AD+V L E       + +
Sbjct: 95  FRLMSFNI----------AIDNWKYST-----ALADMVISSNADVVNLLEAKPLAFHLQR 139

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +F    + I               N        V  K   V++Q   +   +        
Sbjct: 140 LFQAYPYHI------------GCDNGKDSCDTLVLSKRPFVMRQVATIGSLRKDR----- 182

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              V   V+  G+ I ++  HL    + D               Q   L D         
Sbjct: 183 --LVVSSVDFGGQAINIVSAHLSKPYYDD--------------YQMGELDDLGKALGSIS 226

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V++GDFN                             +            I ID+   
Sbjct: 227 GPLVLSGDFNSSAIAPSIQGLLRDQ-------KLKTLAPEPATWPIAAGAFGIAIDHIFA 279

Query: 263 DQNAY 267
                
Sbjct: 280 RAPLR 284


>gi|148981153|ref|ZP_01816315.1| hypothetical protein VSWAT3_14502 [Vibrionales bacterium SWAT-3]
 gi|145960980|gb|EDK26305.1| hypothetical protein VSWAT3_14502 [Vibrionales bacterium SWAT-3]
          Length = 280

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 81/283 (28%), Gaps = 64/283 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  + L  WNI           +K +     ++   L        +D+V LQE    + +
Sbjct: 58  SDGLSLTVWNI-----------YKQNRSHWQTELNKLTA-----GSDLVLLQEASMTDGL 101

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                        S +            +    +     ++ +   +Y      +     
Sbjct: 102 R--------QWVTSGQWGSTRVNAFEAFEKSAGVLNLATHLPIEACAY----THEEPWLQ 149

Query: 141 GNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             + A+    ++ NG+++ V++IH  +F F                 Q + L + + + +
Sbjct: 150 LPKSALWSRYKLSNGEELAVINIHAVNFTFGTEDYEA----------QLKSLTNNLQKYR 199

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P + AGDFN             + ++            +            + +D+
Sbjct: 200 G---PVIFAGDFNSW--SEARFTVLKEALEKVGLAEVAFNPDNRTQFIT-----GLVLDH 249

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                  +  K+     SDH P+ + +
Sbjct: 250 VFYRG---------------LEVEKAKAPITDASDHNPMLVTF 277


>gi|115529017|gb|AAI24574.1| ocrl protein [Xenopus (Silurana) tropicalis]
          Length = 929

 Score = 49.9 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/301 (9%), Positives = 69/301 (22%), Gaps = 43/301 (14%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMGSYNAVAKV 83
           + +WN+N  S   G+  W  +                    D  ++  QE+         
Sbjct: 271 VGTWNVNGQSPDGGLEPWLQAD---------------AEPPDVYVIGFQELDLSTEAFFY 315

Query: 84  FP---KNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDS 136
           F    +  W              ++            +  + ++ + +++          
Sbjct: 316 FDSGKEQEWLEAVERCLHTKAKYKNVRLIRLVGMMMLVFAKHEHFKHIREVVAESVGTGI 375

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             + GN+  V +    +      ++ HL +        N                ++   
Sbjct: 376 MGKMGNKGGVAVRFVFHNTSFCFVNSHLAAHVEDFERRNQDYKDICARLNFTVPDQNIPI 435

Query: 197 QKKESLVPFVIAGDFNRKI--------NYLGNNDDFWKTID------PNDSLIRFPKEKD 242
                    +  GD N ++          L   +D    +         +    F    +
Sbjct: 436 SNIMKHDVVIWLGDLNYRLCKFDAAEVKSLIAKNDIQTLLKYDQLNIQREMKNVFSDFTE 495

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL----SDHCPI 298
              N     +     D         +                       +    SDH P+
Sbjct: 496 GTINFIPTYKFDAKTDR-WDSSGKCRVPAWCDRVLWRGTNITQLKYRSHMELKTSDHKPV 554

Query: 299 S 299
           S
Sbjct: 555 S 555


>gi|227502780|ref|ZP_03932829.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC
           49725]
 gi|227076510|gb|EEI14473.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC
           49725]
          Length = 297

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 74/311 (23%), Gaps = 47/311 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80
            + + S N+N +          N           +  + +   ADIV +QE+ +    A 
Sbjct: 2   SLTIASVNVNGIRAACKQRNENNPG---------MNAWLEQTPADIVLMQEVRATPDQAR 52

Query: 81  AKVFPKNT--WCIFYSTERLINHSKRD---------------SNNDIHTAIAVRKKNVRV 123
             + P     W +  +       +                  S  D    IA   +++RV
Sbjct: 53  KALAPALEAGWHLELADAAAKGRAGVGILSRTPLADVEIGFGSFTDAGRWIAATTRDIRV 112

Query: 124 LQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                P             R       +L E   K + +           D   N  +  
Sbjct: 113 ASLYLPSGDTDSPKLDEKYRFLDEFDAVLAENADKDMVIGGDWNICHRAQDLKNNKANEK 172

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            +    + +   D +        P                    W+            + 
Sbjct: 173 KAGHLPEERAFLDHVFGSFPDEEPQEKKNLGEWLGVVDYAGTTPWEPATAPQWFDVARRL 232

Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                        +           IDY    Q       +          D   +  +R
Sbjct: 233 HPEADGPYTWWTYRGQAFNNDAGWRIDYQAATQPLLDRAQRTWV-------DKAPTVEQR 285

Query: 292 LSDHCPISIDY 302
            SDH P+ ++Y
Sbjct: 286 WSDHSPLLVEY 296


>gi|119632235|gb|EAX11830.1| oculocerebrorenal syndrome of Lowe, isoform CRA_a [Homo sapiens]
          Length = 896

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 241 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 285

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 286 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 345

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 346 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 405

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 406 NQTLPQLNIMKHEVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 465

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 466 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 517

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 518 SH----MELKTSDHKPVSA 532


>gi|34392586|dbj|BAC82626.1| pol-like protein [Ciona intestinalis]
          Length = 1263

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 84/297 (28%), Gaps = 73/297 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + L+++N+  L              +       +  + +    DI+ LQE  +  +  +
Sbjct: 2   PLSLITYNVAGL--------------QNPRKRRSIFYFLRQKKFDIICLQETHTTASCLR 47

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 W + +  E L +H               + K V VL         +D       
Sbjct: 48  -----QWELEWVGEILASHGST------------KSKGVAVLFSKKLSYSKQDVCVDNFG 90

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  + + +EI  +++ + ++        DS +   +    L  +QA+            +
Sbjct: 91  RYII-MNLEITDQRLTLCNV---YGPNQDSPQFYGNLFTLLTKRQAE----------SGI 136

Query: 203 VPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFPKEKDSRCN 246
              +I+GDFN  +N   +                       ++  D              
Sbjct: 137 ENCIISGDFNCVLNDKLDKTGGREKHGNRRAKTTILQAMNDLELYDVFRIKHPNSKQYTR 196

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             K       +D+ +      +   Q                    SDHC + +  +
Sbjct: 197 MQKRPHTASRLDFVLATSEILQKTTQIQIVLSTQ------------SDHCIVKLVLN 241


>gi|297571706|ref|YP_003697480.1| endonuclease/exonuclease/phosphatase family protein
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296932053|gb|ADH92861.1| endonuclease/exonuclease/phosphatase family protein
           [Arcanobacterium haemolyticum DSM 20595]
          Length = 453

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/391 (13%), Positives = 94/391 (24%), Gaps = 95/391 (24%)

Query: 6   VLALVFFLVPCTASV--AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           VL L    VP  A+   A  V + ++N  +L+ +    L K+             +  + 
Sbjct: 13  VLTLGALTVPAVAAEKPASNVVVATFN-ASLNRESEGELLKDLAAPGNPQANNAAETIQR 71

Query: 64  LDADIVFLQEMG-----------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--- 109
           ++ DIV + E               N +      +T   +        ++  DS  D   
Sbjct: 72  INPDIVLVNEFDYDPEHKAMDLFRKNYLEVSINGSTPVTYPYAWTGPVNTGVDSGYDLDH 131

Query: 110 -----------------IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE----- 147
                                  V  K                      N    E     
Sbjct: 132 NGKLGEPSDGWGYGKFPGQYGFVVYSKYPIDANSVRTFQNFLWKDMPGNNLPVAEDGTPW 191

Query: 148 ------------------LLVEINGKKIWVLDIHLKSFCFLDSLENTY-SPSCSLLSQQA 188
                             + V ING  + VL  H       +  E      +   +   A
Sbjct: 192 YSDEILEKFPLSSKTHADIPVNINGTTVHVLADHPTPPIDGNGPERRNSRRNFDEIRIWA 251

Query: 189 QWL---------KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
            ++            +         FVI GD N   N   +     + +  N  ++    
Sbjct: 252 DYISGKADYLYDDAGVKGGLADGANFVIVGDHNSDPNDGNSWPGAIQQLLDNPRVVDTKP 311

Query: 240 EKDSRCN-----ANKNLRNKI------------------PIDYFVMDQNAYKFLIQESFS 276
             +            N  +K                    +DY +   N+   ++     
Sbjct: 312 SSEGGLREAELQGGVNREHKSDPQLDTADFAEGKGPGNLRVDYVL--PNSGTDVLDSRVF 369

Query: 277 EILYNEDDIKSRGKRL---SDHCPISIDYDF 304
               + +  +  G      SDH  +     F
Sbjct: 370 WPTRDNEYFRLTGLHPFPTSDHRLVWAKLHF 400


>gi|228953|prf||1814461A OCRL-1 gene
          Length = 970

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 315 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 359

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 360 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 419

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 420 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 479

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 480 NQTLPQLNIMKHEVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 539

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 540 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 591

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 592 SH----MELKTSDHKPVSA 606


>gi|332226356|ref|XP_003262355.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1 isoform 1
           [Nomascus leucogenys]
          Length = 901

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 77/319 (24%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 283 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTID---------PNDS 233
            +             +  GD N ++            N  D  + +             +
Sbjct: 403 NQTLPQLNIMKHDVVIWLGDLNYRLCMPDASEVKSLINKKDLQRLLKFDQLNIQRTQKKA 462

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 463 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 514

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 515 SH----MELKTSDHKPVSA 529


>gi|332861598|ref|XP_003317719.1| PREDICTED: LOW QUALITY PROTEIN: inositol polyphosphate
           5-phosphatase OCRL-1-like [Pan troglodytes]
          Length = 884

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 221 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 265

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 266 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 325

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 326 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 385

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 386 NQTLPQLNIMKHEVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 445

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 446 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 497

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 498 SH----MELKTSDHKPVSA 512


>gi|207346024|gb|EDZ72646.1| YER019Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 230

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 57/211 (27%), Gaps = 34/211 (16%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----------------QYA 61
           S A  ++ +++N   L       + K+  +R  +    L                     
Sbjct: 34  SKAYSIKFLTFNTWGL-----KYVSKHRKERLRAIADKLAGHSTLTPISDELLPNGGDSN 88

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
           +N D D++ LQE+        +          S                  AI  +    
Sbjct: 89  ENEDYDVIALQEIWCVEDWKYLA-----SACASKYPYQRLFHSGILTGPGLAILSKVPIE 143

Query: 122 RVLQQSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                 +P+     A         +     ++    + I +++ H+ +           +
Sbjct: 144 STFLYRFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQG----DA 199

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
                 S QA      I   +++    ++ G
Sbjct: 200 AYLCHRSCQAWDFSRLIKLYRQAGYAVIVVG 230


>gi|297802942|ref|XP_002869355.1| hypothetical protein ARALYDRAFT_913382 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315191|gb|EFH45614.1| hypothetical protein ARALYDRAFT_913382 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 320

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/322 (10%), Positives = 75/322 (23%), Gaps = 70/322 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            + ++S+N++           + S         L      +    ++  Q       V  
Sbjct: 4   SLSVMSFNLH-------DDQPEESPNSWLKRKDLCLTVITSYSPIVLCTQ-----QGVKS 51

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDS 136
                   +    +  I+       ND H  I   K+ V +L+         P +    +
Sbjct: 52  QLDYLQQGLPAYDQFGISRKGPQDANDEHCTIFFNKEKVELLEGGTFWLSESPSVPGSTA 111

Query: 137 FSRAGNRRAVEL----LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
           +  A    A         ++ G +       + +    +        S  L  Q    L 
Sbjct: 112 WGSAVPCIATWFTTAYTFQLKGAEPPGFSFQIVNTNLDEISPRARRRSALLTWQHIASL- 170

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNA 247
                     +P V  G FN +           +      +          + + +    
Sbjct: 171 -------PPTLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNVALV 223

Query: 248 NKNLRNKI---------------------------PIDYFVMDQNAYKFLIQESFSEILY 280
                 K                              D+ +        ++      +  
Sbjct: 224 RTYHDFKGDKQGTVEFLKLIFRALCLCWDRQTQDLHTDWILYRGR---SIVPVMCEIVND 280

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
             DD+       S H P+  ++
Sbjct: 281 KIDDL-----YPSSHYPVFAEF 297


>gi|153807691|ref|ZP_01960359.1| hypothetical protein BACCAC_01973 [Bacteroides caccae ATCC 43185]
 gi|149130053|gb|EDM21265.1| hypothetical protein BACCAC_01973 [Bacteroides caccae ATCC 43185]
          Length = 351

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/373 (12%), Positives = 89/373 (23%), Gaps = 100/373 (26%)

Query: 3   RKYVLALVFFLVPC--------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54
            K    ++   +           A+    + ++  NI                      +
Sbjct: 1   MKLNFYILLLCLSSIGITSWGRNATPTSHLTVLQLNIW------------QEGSIVEGGF 48

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             +      +DADIVF  E+ +YN                  +    +    +N +   I
Sbjct: 49  EAIADEVAQVDADIVFFSEVRNYN------GTCFISRIIEALKKRGKTYYGEHNPLDVGI 102

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
             +            ++  KDS   +     ++  + I G  I V   HL    +   L 
Sbjct: 103 LSKYNI-----SQQEIIYPKDSGCGS----ILKATIGIAGHTIAVYSAHLDYKNYACYLP 153

Query: 175 NTYSPSCSLLSQQ--------------------AQWLKDWITQKKESLVPFVIAGDFNRK 214
             Y+ S      Q                     +   +   Q        ++ GDFN  
Sbjct: 154 RGYNGSTWKKMTQPVHNADSILAANRIAFREEAIEVFIENARQDIAEGAIVLLGGDFNEP 213

Query: 215 INYLGNND--DFWKTI-------------DPNDSLIRFPKEKDSRCNANKNL-------- 251
            +     D  D W                      I      +   +             
Sbjct: 214 SHLDWQEDTKDLWDHNGVVINWDCSSILCKEGFKDIYRTLYPNPVTHPGFTFPSDNDKMP 273

Query: 252 ----------RNKIPIDYFVMDQNA------------YKFLIQESFSEILYNEDDIKSRG 289
                       +  ID+     N              + +++    E    ++ I  +G
Sbjct: 274 VSKLTWAPDADERDRIDFIYFYPNQDITPISSMILGPSRSIVKSQRIEENTEDNFITPKG 333

Query: 290 KRLSDHCPISIDY 302
              SDH  +   +
Sbjct: 334 IWPSDHKGVIATF 346


>gi|94501712|ref|ZP_01308226.1| hypothetical protein RED65_04909 [Oceanobacter sp. RED65]
 gi|94426112|gb|EAT11106.1| hypothetical protein RED65_04909 [Oceanobacter sp. RED65]
          Length = 250

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 82/294 (27%), Gaps = 57/294 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+VSWN N                             ++L+ADI+ +QE         +
Sbjct: 1   MRVVSWNCNG-------------------ALRQKISAVESLEADILVIQECEDPA----L 37

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                     S         R           + + +         L  +  +       
Sbjct: 38  STPLYRQWAGSYLWDGESKNRGIGVFSRNGHKIERIDWNSSFSVPGLKSSSKTLFWETKD 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + L   ++ K +++              +       S + Q  ++L+  I +      
Sbjct: 98  LRLFLPFIVDNKYLFLAVWT----------KGRSEEVFSYIGQFWKYLQ--IHRTDLMQE 145

Query: 204 PFVIAGDFNRKINYLGNNDD-----FWKTIDPNDSLIRFPK--------EKDSRCNANKN 250
             +I GD N  + +   +           +D      ++ +        E       ++N
Sbjct: 146 NTIILGDLNSNVRWDKPDRWWNHSDVISELDDMGFTSQYHRCFVEGQGLETIPTFFMHRN 205

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                 IDY     +        S +   Y +   K      SDH P+++D +F
Sbjct: 206 REKPYHIDYIFTSSDITDK---CSLNIGSYEDWISK------SDHVPLTLDCEF 250


>gi|71023549|ref|XP_762004.1| hypothetical protein UM05857.1 [Ustilago maydis 521]
 gi|46101569|gb|EAK86802.1| hypothetical protein UM05857.1 [Ustilago maydis 521]
          Length = 577

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 63/217 (29%), Gaps = 8/217 (3%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN---LDADIVFLQEMGSYN 78
           QKVRLVSWNI             +   +       L     +      D+   QE+   +
Sbjct: 96  QKVRLVSWNILAQGLVRRTLFPGSDCLKFKDRSIGLTAELSSRTGHGWDVGCFQEVDRMD 155

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
              +    + +   Y                         + + +   +  +    +   
Sbjct: 156 VHGETMTNDGFSYIYEKGYRQKQHGLLVAWRRDLFGEKAHRQLTIDLDAESVASTNEPVR 215

Query: 139 RAGNR----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            A +R      + + +         L +      +        +    +L ++ Q  ++ 
Sbjct: 216 TACSRVTRNIGLFVALCTASASSPGLIVATTHLFWHPMHAYERARQSGILVRKLQEFRNE 275

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++     P ++AGDFN + +         + +  +
Sbjct: 276 LGEQWNE-APCILAGDFNDQPHSATYRLLTGRKLTQH 311


>gi|320584151|gb|EFW98362.1| AP endonuclease [Pichia angusta DL-1]
          Length = 602

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/378 (10%), Positives = 85/378 (22%), Gaps = 121/378 (32%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYN 78
              +RLV++N+N +   +    W      +             ++ D++  QE  +   +
Sbjct: 13  PTTLRLVTFNVNGIKTLKNYFPWTLVSNYSQ--------MLNMMNIDVITFQELKVQRPD 64

Query: 79  AVAKVFPKNTWCIFYS-TERLINHSKRDSNND---------------------IHTAIAV 116
               +   + +  F S       +S                              T I  
Sbjct: 65  VDLSIADVDGYRSFISVPISKKGYSGVGVYVRKPRDDEPEILKKCLTVVRVEEGITGILP 124

Query: 117 RKKN----------VRVLQQSYPLLGAKDSFSRAGNRR---AVELLVEINGKKIWVLDIH 163
            +K             +            +      +       +++E+N   + +    
Sbjct: 125 HQKKHVSFKEAYSDPVLQPTCIGGYPDHKNMYDKFRKLDSEGRCVIIELNFNIVVISVYC 184

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------- 212
             +    D  E         L ++A+ L+             V+ GD N           
Sbjct: 185 PANSLGTDEGEEFRLLFLRCLFERARNLRAM-------GKKVVVMGDINVCVDLIDSDDT 237

Query: 213 ----------------------------RKINYLGNNDDFWKTIDPNDSLIRFPKEK--- 241
                                          +   + +   + +     +          
Sbjct: 238 IKQGFKERRLVKAQDYSDFETLNADQVLAFKHSAPHRELVNQYVKDTTGMRPDGDSHVLH 297

Query: 242 ----------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
                            S   +N+ L     ID  +        + Q             
Sbjct: 298 DVVREKQGRRLKMYTVWSTFKSNRPLNVGSRIDLILASSQLAPLVSQADIWPF------- 350

Query: 286 KSRGKRLSDHCPISIDYD 303
                  SDHCP+ +D++
Sbjct: 351 ----LHGSDHCPVHVDFE 364


>gi|311978307|ref|YP_003987429.1| putative endonuclease/exonuclease/phosphatase [Acanthamoeba
           polyphaga mimivirus]
 gi|308205125|gb|ADO18926.1| putative endonuclease/exonuclease/phosphatase [Acanthamoeba
           polyphaga mimivirus]
          Length = 698

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 89/324 (27%), Gaps = 45/324 (13%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-K 82
           +R V+WNI T           +      S    + +   +L  D++ LQEM    A   K
Sbjct: 375 IRTVNWNIRTSFLDPKDKKEYSIRG-WQSRKHYVTEMLTHLAPDLILLQEMSPSQANDMK 433

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTA-----------IAVRKKNVRVLQQSYPLL 131
           +F  +             H   +  +   T              +       L+      
Sbjct: 434 MFLNSIGYEVIFRTAHTGHDLYEIIDGEWTGALTGISYFRNRFFINCHGGFWLKDDPHTP 493

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIH-------LKSFCFLDSLENTYSPSCSLL 184
              D+ +    R   E  ++                   ++S   + +  + +       
Sbjct: 494 PPLDADNAENRRPIQEGGIDKCFGDTHSYRHCQWATLLDVQSQQLITTAVSDFPIGGKDS 553

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP----KE 240
             ++  L + + ++       +  G+     +   +  D +K I    +  R        
Sbjct: 554 RLKSAILCNSMLREISGENCLIFGGEICTFEDKGMDGFDTYKKITEQATDWRNTLYGHYG 613

Query: 241 KDSRCNANKNLRNKIPID-YFVMDQNAYKFLIQESFSEILY------------------- 280
             +        + K+ ID + ++       ++   F++ +                    
Sbjct: 614 HQATFVGYHTDKYKVEIDNHGIVSPRNIDIIVHRGFTQGIRSFSLSGEFNPSEKKLNKPL 673

Query: 281 -NEDDIKSRGKRLSDHCPISIDYD 303
            +  +        SDH  I +D +
Sbjct: 674 ISVVNNTKDRLFSSDHFLIGVDLE 697


>gi|297304756|ref|XP_002806438.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1-like isoform
           1 [Macaca mulatta]
          Length = 901

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPSP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 283 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 403 NQTLPQLNIMKHDVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 462

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 463 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 514

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 515 SH----MELKTSDHKPVSA 529


>gi|332226358|ref|XP_003262356.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1 isoform 2
           [Nomascus leucogenys]
          Length = 893

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 77/319 (24%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 283 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTID---------PNDS 233
            +             +  GD N ++            N  D  + +             +
Sbjct: 403 NQTLPQLNIMKHDVVIWLGDLNYRLCMPDASEVKSLINKKDLQRLLKFDQLNIQRTQKKA 462

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 463 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 514

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 515 SH----MELKTSDHKPVSA 529


>gi|255719916|ref|XP_002556238.1| KLTH0H08250p [Lachancea thermotolerans]
 gi|238942204|emb|CAR30376.1| KLTH0H08250p [Lachancea thermotolerans]
          Length = 512

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/365 (10%), Positives = 82/365 (22%), Gaps = 102/365 (27%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--- 77
              VR +++N+N +        + +           L +  +   +DI+  QE+ +    
Sbjct: 9   GHDVRFLTFNVNGIRTLFHYHPFSSMNSS-------LSRVFEYFQSDIITFQELKTDTLS 61

Query: 78  -----------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRK 118
                      + ++    +  +       R+        +    T         + VR 
Sbjct: 62  LSKWGKVDGFHSFISLPLKRKGYAGVGCWVRIPKPGDSMFSALQVTKAEEGITGYLQVRV 121

Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV---LDIHLKSFCFLDSLEN 175
                  +    +G     +      A  L ++  G+ + V    ++ + S     +   
Sbjct: 122 GKTATKYRDNQAVGIGGYEALGIEDEADALSIDSEGRCVMVELKCNMVVISTYCPANSSL 181

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------------------- 216
           T      +  +  + L   I   +      V+ GD N   +                   
Sbjct: 182 TD-EGEEMRIRFLKVLFRRIRNLQALGKRVVLMGDINVCRDLIDHAEALKETHIFVTDLT 240

Query: 217 --------------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR---- 252
                                        + +  +                    R    
Sbjct: 241 KGTQVEQTYSAFVKDFIFAPSRPARRLLNEMLADSVLKPFAESGSLIDTTRYIQGRDRMK 300

Query: 253 ---------------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                              IDY +        L +      +             SDHCP
Sbjct: 301 MYTVWNTLRNSRPVNYGSRIDYILATAGLKNDLKKADIWPKI-----------MGSDHCP 349

Query: 298 ISIDY 302
           +  D 
Sbjct: 350 VFADI 354


>gi|147844432|emb|CAN82094.1| hypothetical protein VITISV_031210 [Vitis vinifera]
          Length = 1501

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 22/131 (16%)

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------FWKTIDP 230
           S        + L       +    P+ + GDFN  +     + +         F + ID 
Sbjct: 632 SREERECLWEELGAIKGSWE---EPWCLGGDFNTILYQAERSRNGRITSAMRRFAQIIDD 688

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              +    +      +   N ++   +D F+   +              Y+    +   +
Sbjct: 689 LGLVDIPLQGGSFTWSGGLNNQSWARLDRFLATPS----------WLDQYSRVHQRRLSR 738

Query: 291 RLSDHCPISID 301
             SDH P+ ++
Sbjct: 739 PTSDHFPVLLE 749


>gi|119173435|ref|XP_001239168.1| hypothetical protein CIMG_10190 [Coccidioides immitis RS]
          Length = 346

 Score = 49.6 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 83/296 (28%), Gaps = 23/296 (7%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQ 72
              ++    + LV+WNIN             +        + +  + +++    D++FLQ
Sbjct: 62  STQSAQDIPLALVTWNIN------------GTDLAPDIRTSAIVTHIRDMRPVMDVIFLQ 109

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+        +        +YS+E         S + +      R   ++   +   L  
Sbjct: 110 EVTRTTLSVLLAMPWVREQWYSSEADATSWGHQSISTMTLLSKSRFHGLKCTPERAALSA 169

Query: 133 AKD-SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                F     R A+   + +           +        L N +  S ++        
Sbjct: 170 VWRVPFPSHFGRDALCCDIFLPICTPSECKKSVPGSHARIRLVNVHLDSLAIQPSYRPRQ 229

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--NK 249
              I     +    ++AGDFN  +     +D      +  D                  K
Sbjct: 230 LSIIASYLRAAGRGLVAGDFNPVL---PEDDSLINENNLVDVWTELRPNDPGFTWGIDGK 286

Query: 250 NLRNKIPIDYF--VMDQNAYKFLIQESFSEILYNEDDIKSR-GKRLSDHCPISIDY 302
                  +D    +  +     +I        Y  ++       + SDHC +   +
Sbjct: 287 QAYPANRLDKVAKLGLKTHEIEVIPPGTCTYAYAAENRPEEREHKWSDHCGLKCSF 342


>gi|332248388|ref|XP_003273346.1| PREDICTED: LOW QUALITY PROTEIN: type II
           inositol-1,4,5-trisphosphate 5-phosphatase-like
           [Nomascus leucogenys]
          Length = 913

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 82/314 (26%), Gaps = 61/314 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           + ++N+N  S +E + LW             L    +  D   V  QE+           
Sbjct: 269 VGTYNVNGQSPKECLRLW-------------LSSGIQAPDVYCVGFQELDLSKEAFFFHD 315

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFS 138
              +  W    S     +             I     V++++   + +            
Sbjct: 316 TPKEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMG 375

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R GN+  V +  + +   I V++ HL +        N          Q  Q         
Sbjct: 376 RMGNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLT 435

Query: 199 KESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEK 241
             +    +  GD N +I  L                    D     +        F + +
Sbjct: 436 ISNHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQTLYAYDQLKIQVAAKTVFEGFTEGE 495

Query: 242 DSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +     K              R     D  +           ++ +++ Y         
Sbjct: 496 LTFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MA 543

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+S  +D
Sbjct: 544 LKTSDHKPVSSVFD 557


>gi|328773618|gb|EGF83655.1| hypothetical protein BATDEDRAFT_22534 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 343

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/341 (11%), Positives = 92/341 (26%), Gaps = 59/341 (17%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
               + +    VRL+++N+                +R     + +         D+V +Q
Sbjct: 2   STSISDATTHSVRLLTYNMFMRPPGIYSGNGDFKWERLRLFASTVLS-----SYDVVSVQ 56

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E  ++    +                       ++  +   + +  +        Y    
Sbjct: 57  ECFAFGTTRRSEFIRLAKEQGLEYHCACPLPSWTSGQVDGGLLILSRFPITD-TDYLTYP 115

Query: 133 AKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                     +  +   +E+  G+ + +   H ++    D      SPS  +   Q Q  
Sbjct: 116 RGVHSDWLAAKGVLYARIEVAQGQYLMLFSTHTQASYEADPPL--DSPSSLVRLDQLQRA 173

Query: 192 KDWITQKKESLVP---------FVIAGDFNRKI--------NYLGNNDDFWKTIDP---- 230
             +I+ K + + P          + AGDFN            +         TI      
Sbjct: 174 SKFISAKLDPIEPTNSQQAKGVVMFAGDFNVNGRFSRLDGVQHSKEYQLLVDTISGSQSI 233

Query: 231 ----------------------NDSLIRFPKEKDSRCNANKNLRNKI--PIDYFV--MDQ 264
                                 + +     +   + C      +      +DY    + +
Sbjct: 234 QDQQTPSEISKNTSQKELFDVVDIAYTCLNEHPVTTCTIVDTDKEPENKCLDYLFHLISK 293

Query: 265 NAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +     +  ++ S   +  D        +SDHC ++ +  F
Sbjct: 294 STTPTSVQFKNVSVEPFLVDKQPFT--HMSDHCGMAANLVF 332


>gi|146318325|ref|YP_001198037.1| exonuclease III [Streptococcus suis 05ZYH33]
 gi|145689131|gb|ABP89637.1| Exonuclease III [Streptococcus suis 05ZYH33]
          Length = 168

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/179 (10%), Positives = 42/179 (23%), Gaps = 37/179 (20%)

Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
           +  G+ I +                      +          D++ +  +S  P +  GD
Sbjct: 2   DSEGRIITLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQYADYLAK-LDSHKPVLATGD 60

Query: 211 FNR---------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK- 254
           +N                   +       +  +        F        NA      + 
Sbjct: 61  YNVAHKEIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAYTWWAQRS 120

Query: 255 ---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                      IDY+++       + +    +    +           DH PI ++  F
Sbjct: 121 RTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQ-----------DHTPIVMEISF 168


>gi|330936314|ref|XP_003305336.1| hypothetical protein PTT_18151 [Pyrenophora teres f. teres 0-1]
 gi|311317679|gb|EFQ86565.1| hypothetical protein PTT_18151 [Pyrenophora teres f. teres 0-1]
          Length = 1233

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 78/302 (25%), Gaps = 34/302 (11%)

Query: 26  LVSWNIN------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           + ++N+N             +    +  ++      +  Q    L    +   +     A
Sbjct: 625 VGTFNLNGKTSGINSDLSPWLCPDVDPSQQCPEIVAVGFQEIVELSPQQIMSTDPDRREA 684

Query: 80  VAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             +              +      +         ++ VR   ++ ++     L       
Sbjct: 685 WEEAVRNCLNKNAEKHRKDEYVMLRGGQLVGASLSVFVRSDCLKHIKNVEGALKKTGMSG 744

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            AGN+ AV +  E     I ++  HL +        N    + S        L+    + 
Sbjct: 745 MAGNKGAVAIRFEYANTSICLVTAHLAAGFSNYQERNRDYKTISHG------LRFQRNRS 798

Query: 199 KESLVPFVIAGDFNRKINYL----------------GNNDDFWKTIDPNDSLIRFPKEKD 242
            E     +  GDFN +I                     ND     +    +   + + + 
Sbjct: 799 IEDHDTVIWFGDFNYRIGLNNEKVQRLCHVGDLETLYENDQLNLQMVAGLTFPYYSEARI 858

Query: 243 SRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +     K   N    D     +      +  +         +        R SDH P+  
Sbjct: 859 TFPPTYKYDLNSDQYD---TSEKARIPAWCDRVLRKGDNIRQIQYNDAPLRFSDHRPVYA 915

Query: 301 DY 302
            +
Sbjct: 916 TF 917


>gi|148698404|gb|EDL30351.1| inositol polyphosphate-5-phosphatase B, isoform CRA_a [Mus
           musculus]
          Length = 828

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 83/316 (26%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +                  L  D+  V  QE+         
Sbjct: 352 VGTYNVNGQSPKECLRPWLSHS---------------ALAPDVYCVGFQELDLSKEAFFF 396

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 397 HDTPKEEEWFKAVSESLHPDAKYAKVKFVRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 456

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q  Q       
Sbjct: 457 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFPQVDPSQPP 516

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N +I  L                   +D     +        F +
Sbjct: 517 LTINKHDVILWLGDLNYRIEELDVGKVKKLVEEKAFQTLYAHDQLKIQVAARTIFDGFTE 576

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + +     K              R     D  +           ++ +++ Y       
Sbjct: 577 GEITFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH---- 624

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+S  +D
Sbjct: 625 MALKTSDHKPVSSVFD 640


>gi|148698405|gb|EDL30352.1| inositol polyphosphate-5-phosphatase B, isoform CRA_b [Mus
           musculus]
          Length = 791

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 83/316 (26%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +                  L  D+  V  QE+         
Sbjct: 147 VGTYNVNGQSPKECLRPWLSHS---------------ALAPDVYCVGFQELDLSKEAFFF 191

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 192 HDTPKEEEWFKAVSESLHPDAKYAKVKFVRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 251

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q  Q       
Sbjct: 252 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFPQVDPSQPP 311

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N +I  L                   +D     +        F +
Sbjct: 312 LTINKHDVILWLGDLNYRIEELDVGKVKKLVEEKAFQTLYAHDQLKIQVAARTIFDGFTE 371

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + +     K              R     D  +           ++ +++ Y       
Sbjct: 372 GEITFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH---- 419

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+S  +D
Sbjct: 420 MALKTSDHKPVSSVFD 435


>gi|15418718|gb|AAG23293.1| inositol polyphosphate 5-phosphatase II isoform [Mus musculus]
          Length = 825

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 83/316 (26%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +                  L  D+  V  QE+         
Sbjct: 349 VGTYNVNGQSPKECLRPWLSHS---------------ALAPDVYCVGFQELDLSKEAFFF 393

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 394 HDTPKEEEWFKAVSESLHPDAKYAKVKFVRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 453

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q  Q       
Sbjct: 454 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFPQVDPSQPP 513

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N +I  L                   +D     +        F +
Sbjct: 514 LTINKHDVILWLGDLNYRIEELDVGKVKKLVEEKAFQTLYAHDQLKIQVAARTIFDGFTE 573

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + +     K              R     D  +           ++ +++ Y       
Sbjct: 574 GEITFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH---- 621

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+S  +D
Sbjct: 622 MALKTSDHKPVSSVFD 637


>gi|293371542|ref|ZP_06617960.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|298480441|ref|ZP_06998638.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22]
 gi|299146988|ref|ZP_07040055.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
 gi|292633490|gb|EFF52055.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|295086120|emb|CBK67643.1| Endonuclease/Exonuclease/phosphatase family. [Bacteroides
           xylanisolvens XB1A]
 gi|298273262|gb|EFI14826.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22]
 gi|298514873|gb|EFI38755.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
          Length = 356

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/376 (10%), Positives = 79/376 (21%), Gaps = 99/376 (26%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----------------VRLVSWNINTLSEQEGVSLWKN 45
           ++K++L ++  ++P   + ++                 ++ +  N+              
Sbjct: 1   MQKWLLTIIIAILPVITACSKTDTEVSVPEEETGKKTEIKFLQLNLW------------V 48

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
              +       L +    L  DI    E+        V PK    +              
Sbjct: 49  ECTKVEHAPEYLIEQIATLQPDIATFCELYKGPQDDPVMPKLMQGL--------KDKGLI 100

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
             +      AV  K      +       K      G R AV         +      +  
Sbjct: 101 YYDARIDGRAVISKYPIKETERINKWMFKAILDVNGKRVAVY----PAHSEYRYYTCYYP 156

Query: 166 SFCFLDSLENTYSPS-------------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
                 S+     P+              S   + AQ   +   ++ E       AGD N
Sbjct: 157 RGYNDGSVNWDKLPAPITDVNKILAVCEESDRIESAQAFINNAAKELEQGALVFFAGDLN 216

Query: 213 RKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSR--CNANKNL----- 251
                    D                 K +        +         C           
Sbjct: 217 EPSYLDWQADTKDLFDHRGCIVNWGTSKLLVQRGYKDAYRVIHPDPVKCPGFTFPADNKS 276

Query: 252 ------------RNKIPIDYFVMDQNAYKFLIQESF-------------SEILYNEDDIK 286
                         +  ID+     N    +                   E   +     
Sbjct: 277 VIPENLSWAPEADERERIDFVYYYPNKNLQIKSAQIVGPTGSIVRGQRIEEQTKDPIIPP 336

Query: 287 SRGKRLSDHCPISIDY 302
              +  SDH  + I +
Sbjct: 337 VNNQWPSDHKGVLITF 352


>gi|290980894|ref|XP_002673166.1| predicted protein [Naegleria gruberi]
 gi|284086748|gb|EFC40422.1| predicted protein [Naegleria gruberi]
          Length = 489

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 67/226 (29%), Gaps = 14/226 (6%)

Query: 23  KVRLVSWNINT---LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYN 78
              L+S+NI      + Q        S  R       L     + ++D++ LQE     +
Sbjct: 33  PFSLISYNILAQALCNRQGSQKYLTKSQARWNIRRNNLLNEISHYNSDLISLQECDFYDS 92

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI---------AVRKKNVRVLQQSYP 129
                  +  +   YS +     + +     + TA           V     +   +   
Sbjct: 93  FWKSELERLGYETLYSQQFNCEKNYQPMPYGLLTAFKKDKFKLLEFVVLDYQKEALKDVN 152

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
           +   +   ++     A+  ++        VL +      +  +  +       +L Q  Q
Sbjct: 153 ITDIEIYEAKLSGNIALISVLSPIDHPEKVLILSNTHLYWRPACNSVRVRQALILMQTVQ 212

Query: 190 WLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
            LK+    +     V +V  GD+N   N         +    N+  
Sbjct: 213 KLKETYDSQSSYESVEYVCTGDYNTSPNDPPYILLTTRNPSNNEPF 258


>gi|321460920|gb|EFX71957.1| hypothetical protein DAPPUDRAFT_308625 [Daphnia pulex]
          Length = 1150

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/338 (10%), Positives = 75/338 (22%), Gaps = 66/338 (19%)

Query: 19  SVAQKVRLV--SWNINTLSEQEGVSLWKNSVKRT-----TSDYTLLRQYA--------KN 63
           +  Q +R+   ++N+N       V    +++          D    R           + 
Sbjct: 526 TEPQPIRVAVGTYNVNGGHHFRSVVYKDSTLADWLLDSPHQDSAAARSLVCLSEEQGWRT 585

Query: 64  LDADIVFLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
            D   V  +E+   NA   +         W          +             + +   
Sbjct: 586 ADIYAVGFEEIVDLNASNIMAASSENAKAWATELQKVLSRDRPFALLTYVQLVGVCLYVF 645

Query: 120 NVRVLQQSYPLLGA----KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
               L      +             GN+  V +   +    +  +  H  +     +  N
Sbjct: 646 IRPELAADVRDVATDSVKTGLGGATGNKGGVAVRFLLGNTSLCFVCSHFAAGQSQWAERN 705

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN--------------- 220
                 +              +K E        GDFN +I+   +               
Sbjct: 706 ADYAEITRRICF------PHGRKVEQHDFVFWCGDFNYRIDLDRDEVKEYVSLREWSSLL 759

Query: 221 -NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQNAY 267
             D         ++ + + + + S     K                    D  +  +   
Sbjct: 760 QYDQLKIQQAQGNTFVNYVEGEISFPPTYKYDLFSDDYDTSEKCRAPAWTDRVLFRKR-- 817

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISI--DYD 303
                                  + SDH P+    D D
Sbjct: 818 -----RDHGHNPGRVAYYGRAELKQSDHRPVMAFIDID 850


>gi|261345878|ref|ZP_05973522.1| endonuclease/exonuclease/phosphatase family protein [Providencia
           rustigianii DSM 4541]
 gi|282566371|gb|EFB71906.1| endonuclease/exonuclease/phosphatase family protein [Providencia
           rustigianii DSM 4541]
          Length = 263

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 80/290 (27%), Gaps = 73/290 (25%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
              + + +V+WNI                ++  +    L +  +     ++ LQE     
Sbjct: 39  PAGETLDVVTWNIY--------------KQQRPNWKATLAELVQGKK--LLLLQEAQMSP 82

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +      +                  ++       +     V  L  S+P+        
Sbjct: 83  ELISFAASHQ---------------LIADQVPALPFSPHPSGVMTLATSHPIYCCPLREK 127

Query: 139 RAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R A   L+      NG+ + V ++H  +F F   +               + L   
Sbjct: 128 EPLLRLAKSALITVYPLPNGRHLMVANVHAINFSFGVDVYT-------------KQLNKL 174

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRN 253
            +   + + P ++AGDFN             + ++     IR    K+   + + +    
Sbjct: 175 GSHISKHVGPVILAGDFNA---------WSRQRVNALKRFIRAVGLKEVSYDVDLRTKAF 225

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             P+D+                        +        SDH PI   + 
Sbjct: 226 GRPLDFMFYRG---------------LKIKNSHVLQTDASDHNPIITQFS 260


>gi|147786908|emb|CAN62318.1| hypothetical protein VITISV_026527 [Vitis vinifera]
          Length = 1141

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 86/288 (29%), Gaps = 68/288 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN+  L               + +   +++ + ++ + D+V +QE    N   + 
Sbjct: 1   MKIISWNVRGLG--------------SRNKRRMVKDFLRSENPDVVMIQETKKENCDRRF 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W +       +  S           I +   +  + ++   +             
Sbjct: 47  VGS-VWTVRNKDWVALPVSGASG------GILIIWDSKNLRREEVVIGSFS--------- 90

Query: 144 RAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             + +   ++G   +W+  ++  +   L             L+                 
Sbjct: 91  --ISVKFSLDGCGPLWISAVYGPNSPSLRKDFWVELFDIYGLTYLL-------------- 134

Query: 203 VPFVIAGDFNR---------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
             + + GDFN            +   +  DF   I   + L    +      +  +    
Sbjct: 135 --WCVGGDFNVIRRSSEKLGGSSLTPSMRDFDSFIRECELLDPPLRNASFTWSNMQESPV 192

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +D F+                +L+ +   ++  +R SDH PI +D
Sbjct: 193 CKRLDRFLYSNE----------WGLLFPQGLQEALIRRTSDHWPIVMD 230


>gi|297605551|ref|NP_001057339.2| Os06g0264900 [Oryza sativa Japonica Group]
 gi|53793169|dbj|BAD54376.1| putative angel protein [Oryza sativa Japonica Group]
 gi|125596780|gb|EAZ36560.1| hypothetical protein OsJ_20898 [Oryza sativa Japonica Group]
 gi|255676909|dbj|BAF19253.2| Os06g0264900 [Oryza sativa Japonica Group]
          Length = 300

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 75/208 (36%), Gaps = 25/208 (12%)

Query: 16  CTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFL 71
            + S      ++S+NI   N       + L       R  S   L+ +  ++ D D+V L
Sbjct: 84  ASTSDGDACTIMSYNILADNNAHYHPDLYLDVPWDAMRWDSRRRLIIREIRHWDPDLVCL 143

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+  +  +A       +   +          R  +     A   + K + +L++     
Sbjct: 144 QEVDRFRDIATEMENRGYQSRF--------KGRTGDAKDGCATFWKSKGLHLLEEDSIDF 195

Query: 132 GAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                     N  A   + E+N  +K+ V +IH+    F     +       +L ++A  
Sbjct: 196 SE----YNLRNNVAQIFVFELNRAQKLVVGNIHV---LFNPKRGDVKLGQIRMLLEKANA 248

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYL 218
           L +     K   +P V+AGDFN   +  
Sbjct: 249 LAE-----KWGGIPIVLAGDFNSTPDLD 271


>gi|209881847|ref|XP_002142361.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
 gi|209557967|gb|EEA08012.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
          Length = 675

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 72/239 (30%), Gaps = 32/239 (13%)

Query: 17  TASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           T    +++RLVS+NI          +  E          ++    +L+ Q   +LDADI+
Sbjct: 292 TNQEDEQIRLVSFNILADIYTQTPKALTEMYISCPQYALQSQYRRSLIIQELIDLDADIL 351

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-- 127
            LQE+ S   V        +    +                  A  ++K    ++     
Sbjct: 352 CLQEVQSSTFVQ------FYQPILAYYNYNGCIAERDKEKGGVATFMKKDKFNIINSHCI 405

Query: 128 ---------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178
                    YP L  K S         +   +    +      I+   +  +++    + 
Sbjct: 406 HFNSRFIENYPDLVEKISIMWPQFFTNLFYNISTVYQFTIAESIYGSMYLVINTHLFYHP 465

Query: 179 PSCSLLSQQAQWLKDWITQ--------KKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
               +   Q + L D + +            +V  ++ GDFN   N           I 
Sbjct: 466 NGGHVRILQIKLLMDLVKEYLEIIKQNYPGKVVYVLLFGDFNSLPNSGSRRLLLDGHIS 524


>gi|17826924|dbj|BAB79294.1| hypothetical protein [Streptomyces griseus]
          Length = 400

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 52/254 (20%), Gaps = 32/254 (12%)

Query: 42  LWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101
            W       ++D      + + LDAD+  LQE             +        ER +  
Sbjct: 117 SWDTQHWCQSTDPEPFYAFLRGLDADVYLLQEYHHDEF-------DGTYRLIDDERRLRE 169

Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161
           +       I   +    +   V                      +     ++   I V  
Sbjct: 170 TFPGHRAVIARGLITLSRLPVVATVETAARRTLRVDLEMPGDGRILATFNVH---IPVQL 226

Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221
             +               +           +  +        P +IAGDFN         
Sbjct: 227 RLISPLRADFYRAVRTRAADREREY-----RGLLADVAGCPHPALIAGDFNTTAAIGDAR 281

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                        +             +       +D+ +    A               
Sbjct: 282 RIA----RLGSDAVALSGRLCPTSWQARPGLRWWRLDWVLTTPGARVHR----------- 326

Query: 282 EDDIKSRGKRLSDH 295
                   + LSDH
Sbjct: 327 --YRFRDPRGLSDH 338


>gi|303230575|ref|ZP_07317328.1| endonuclease/exonuclease/phosphatase family protein [Veillonella
          atypica ACS-049-V-Sch6]
 gi|302514768|gb|EFL56757.1| endonuclease/exonuclease/phosphatase family protein [Veillonella
          atypica ACS-049-V-Sch6]
          Length = 386

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
          K+R+ S+NI   S ++ V    +S  R   D  ++ +  +  + DI+ LQE+    A+  
Sbjct: 2  KIRIGSFNIEKFS-RQSVYCNDDSESR--KDIKMIAKIIRENNFDIIALQEVFHPEALKY 58

Query: 83 VF 84
          + 
Sbjct: 59 LL 60


>gi|297304758|ref|XP_002806439.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1-like isoform
           2 [Macaca mulatta]
          Length = 893

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 75/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPSP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 283 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 403 NQTLPQLNIMKHDVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 462

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 463 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 514

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 515 SH----MELKTSDHKPVSA 529


>gi|148698406|gb|EDL30353.1| inositol polyphosphate-5-phosphatase B, isoform CRA_c [Mus
           musculus]
          Length = 993

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 83/316 (26%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +                  L  D+  V  QE+         
Sbjct: 349 VGTYNVNGQSPKECLRPWLSHS---------------ALAPDVYCVGFQELDLSKEAFFF 393

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 394 HDTPKEEEWFKAVSESLHPDAKYAKVKFVRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 453

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q  Q       
Sbjct: 454 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFPQVDPSQPP 513

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N +I  L                   +D     +        F +
Sbjct: 514 LTINKHDVILWLGDLNYRIEELDVGKVKKLVEEKAFQTLYAHDQLKIQVAARTIFDGFTE 573

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + +     K              R     D  +           ++ +++ Y       
Sbjct: 574 GEITFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH---- 621

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+S  +D
Sbjct: 622 MALKTSDHKPVSSVFD 637


>gi|147768164|emb|CAN71649.1| hypothetical protein VITISV_003282 [Vitis vinifera]
          Length = 1021

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 39/130 (30%), Gaps = 22/130 (16%)

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------FWKTIDP 230
           S        + +       +    P+ + GDFN  +     + +         F + ID 
Sbjct: 394 SREERECLWEEIGAIGGLWE---EPWCLGGDFNTILYQSERSRNGRITSAMRRFAQIIDD 450

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              +    +      +   N ++   +D F+   + +    + S   +            
Sbjct: 451 LGLVDLPLQGGSFTWSGGLNNQSWARLDRFLATPSWFDQYSRVSQRRLPRPT-------- 502

Query: 291 RLSDHCPISI 300
             SDH P+ +
Sbjct: 503 --SDHFPVIL 510


>gi|134101851|ref|YP_001107512.1| endonuclease/exonuclease/phosphatase family protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133914474|emb|CAM04587.1| endonuclease/exonuclease/phosphatase family [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 312

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 81/306 (26%), Gaps = 55/306 (17%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
            ++ + +L+   G +   + V +T +       + ++  AD+  +QE     A  ++  +
Sbjct: 34  ATFGVVSLNAWHGGTQVDDGVAKTEA-------FVRSSGADVFGMQETEGTLA-DELAGR 85

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             W  + +                   +A+  +   V +    +          G R+AV
Sbjct: 86  LGWHSYQTG-----------------DVALLSRYPIVERFQSRVGVGARLQLDDG-RQAV 127

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDS-LENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              V +N       D                 S     + +  + +   I Q +    P 
Sbjct: 128 VWTVHLNYTPYGPYDACFDHMTPQQILDREESSGRVDEIRETLEKMAPQIEQARAGGAPV 187

Query: 206 VIAGDFNRKINYLGN---------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
            + GDFN   +                 W T             +++  +      N   
Sbjct: 188 FLTGDFNAPSHLDWTGAAQDSHCGYTVQWPTSVAVAEAGLADSFREANADPVATPGNTWS 247

Query: 256 -----------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             ID+     +A                 D  +  +  +DH  +
Sbjct: 248 PVYPKHDGSTGADEPQDRIDFVHHAGSARTVSSTAEVRGEPAPVPD-HAGNEWPTDHAAV 306

Query: 299 SIDYDF 304
              + +
Sbjct: 307 VSFFSW 312


>gi|74008387|ref|XP_852376.1| PREDICTED: similar to phosphatidylinositol polyphosphate
           5-phosphatase isoform a isoform 2 [Canis familiaris]
          Length = 902

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 74/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S    +  W N                     DI  +  QE+  S
Sbjct: 240 QTFRFFVGTWNVNGQSPDSELEPWLNCDSNP---------------PDIYCIGFQELDLS 284

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 285 TEAFFYFESVKEQEWSMAVERSLHSKAKYKKVQLVRLVGMMLLIFARKDQWRYIRDVATE 344

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 345 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 404

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 405 NQTLPQLNIMKHDVVIWLGDLNYRLCMPDANEVKSLINKNDLQRLLKFDQLNIQRTQKKA 464

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 465 FVDFTEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLHYR 516

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 517 SH----MELKTSDHKPVSA 531


>gi|1019103|gb|AAA79207.1| inositol polyphosphate 5-phosphatase [Homo sapiens]
          Length = 942

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 289 TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 346

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 347 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 406

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 407 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 466

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 467 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 526

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 527 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 574

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 575 TSDHKPVSSVFD 586


>gi|167521495|ref|XP_001745086.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776700|gb|EDQ90319.1| predicted protein [Monosiga brevicollis MX1]
          Length = 586

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 50/191 (26%), Gaps = 29/191 (15%)

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ-----QAQWLKDWI 195
             R      +    K +       +S    D  E       +         + +   +  
Sbjct: 395 ERRVVFACTLHAKSKHVANGRSRWESHNDADKQEFIQQAVKNRRRIVGECLRLRECLNRF 454

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--------------LIRFPKEK 241
              +      V++GD N           +  T   +                LIR     
Sbjct: 455 VFARHENPLLVVSGDLNAGPGMDFFERFYLMTSGLDALMGSPFNHNKMLQALLIRSRFVS 514

Query: 242 DSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEI---LYNEDDIKSRGKR 291
            +                 ++ ID+  + +  ++   +   +      +++  ++ R + 
Sbjct: 515 PASMYTAIFDDYVDGVPSKRVLIDHICVSRALFQTTRRAGVAHELFEQFSDARLEGRARH 574

Query: 292 LSDHCPISIDY 302
            SDH PI  D 
Sbjct: 575 PSDHRPIWADL 585



 Score = 45.3 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 34/124 (27%), Gaps = 11/124 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSD------YTLLRQYAKNLDADIVFLQEMGSY 77
           +R  SWNI   +         N    +            +      LDAD++ +QE  S 
Sbjct: 159 LRYASWNIEWFNALFLSDTEFNLAVPSQDIADVNDLLERIACVIVALDADLLAVQEGPSN 218

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                +F +      +S          + +        VR++      +  P   A    
Sbjct: 219 LQRMTLFIERYLDSAFSVI-----GGLEPHEAQQLYFLVRREGPLRNVRLVPEAQAFLQQ 273

Query: 138 SRAG 141
               
Sbjct: 274 PWHF 277


>gi|74008389|ref|XP_549244.2| PREDICTED: similar to phosphatidylinositol polyphosphate
           5-phosphatase isoform b isoform 1 [Canis familiaris]
          Length = 894

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 74/319 (23%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S    +  W N                     DI  +  QE+  S
Sbjct: 240 QTFRFFVGTWNVNGQSPDSELEPWLNCDSNP---------------PDIYCIGFQELDLS 284

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK   R ++     
Sbjct: 285 TEAFFYFESVKEQEWSMAVERSLHSKAKYKKVQLVRLVGMMLLIFARKDQWRYIRDVATE 344

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 345 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 404

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 405 NQTLPQLNIMKHDVVIWLGDLNYRLCMPDANEVKSLINKNDLQRLLKFDQLNIQRTQKKA 464

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 465 FVDFTEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLHYR 516

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 517 SH----MELKTSDHKPVSA 531


>gi|241957489|ref|XP_002421464.1| non-LTR, zorro-like retrotransposon family polyprotein fragment,
           putative [Candida dubliniensis CD36]
 gi|223644808|emb|CAX40801.1| non-LTR, zorro-like retrotransposon family polyprotein fragment,
           putative [Candida dubliniensis CD36]
          Length = 449

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 80/266 (30%), Gaps = 69/266 (25%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           +K ++ S NIN L+                 D+  L    K    D++ LQE+    A+ 
Sbjct: 16  EKFKVTSRNINRLT-----------------DFKKLADLFKGS--DVICLQELTDSGAMR 56

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                             +  K  S       I V+KK    +     L       +  G
Sbjct: 57  --------------INRFSDFKLYSIPKGEAGIVVKKKWEPFVSHPMVL------ANILG 96

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R   +L++ I+G KI  +  +  S                 + +  + L   + + + +
Sbjct: 97  TRNIADLVLSIDGVKIRFICFYGPS------------DQQENILKLLKNLNGVLGRSETN 144

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN--------------- 246
               ++ GDFN  ++     D     I  ++  ++   +                     
Sbjct: 145 HDEIIMLGDFNHVMDVK--YDTLRIPIVEHEKYLQEEMKTFENAFNLVDVMRSIDPVIYA 202

Query: 247 -ANKNLRNKIPIDYFVMDQNAYKFLI 271
             N+   N   ID   +  N    +I
Sbjct: 203 PTNRYYTNLRRIDRVYVTSNLRSKVI 228


>gi|119627716|gb|EAX07311.1| inositol polyphosphate-5-phosphatase, 75kDa, isoform CRA_e [Homo
           sapiens]
          Length = 748

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 260 TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 317

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 318 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 377

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 378 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 437

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 438 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 497

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 498 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 545

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 546 TSDHKPVSSVFD 557


>gi|110747136|gb|ABG89387.1| cytolethal distending toxin B [Salmonella enterica subsp. enterica
           serovar Gallinarum]
          Length = 269

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 85/306 (27%), Gaps = 52/306 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M +     L   +    +     +   ++++WN+   S         N  +  +      
Sbjct: 1   MKKPVFFLLTMIICSYISFACANISDYKVMTWNLQGSSASTESKWNVNVGQLLS------ 54

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                    DI+ +QE G+    A    ++                  + +         
Sbjct: 55  ----GTAGVDILMVQEAGAVPTSAVPTGRHIQPFGVGIPIDEYTWNLGTTSRQDIRYIYH 110

Query: 118 KKN-VRVLQQSYPLLGAKDSFSRAGNRRAVEL---LVEINGKKIWVLDIHLKSFCFLDSL 173
               V   + +  ++  + + +    R        ++ I       L  H  +    D+ 
Sbjct: 111 SAIDVGARRVNLAIVSRQRADNVYVLRPTTVASRPVIGIGLGNDVFLTAHALASGGPDAA 170

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                        Q + L             + +AGDFNR  + L  ND   + ++   +
Sbjct: 171 AIVRVTINFFRQPQMRHLS------------WFLAGDFNRSPDRL-ENDLMTEHLERVVA 217

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDY-FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           ++   +                 +DY  ++D+  Y   +            +     +  
Sbjct: 218 VLAPTEPTQIGGGI---------LDYGVIVDRAPYSQRV------------EALRNPQLA 256

Query: 293 SDHCPI 298
           SDH P+
Sbjct: 257 SDHYPV 262


>gi|167381785|ref|XP_001735855.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165901976|gb|EDR27926.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 361

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 64/192 (33%), Gaps = 15/192 (7%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++ ++S+N+   +             R       + ++      DI+FLQ++    +  
Sbjct: 41  QQINVLSYNLCLRAPLISNEGDDFKNVRLDLFIKNVLEHF-----DIIFLQDVIGAYSAR 95

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +            T  L++ +           + +  +   +  +   +  ++       
Sbjct: 96  RAHLIECAYEKGLTHSLVSLTPILPCFICDGGLLILSRIP-LKDRDQYIFKSRIFPESIL 154

Query: 142 NRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-TQKK 199
           +R  +   ++ N   I  + +  L+S      +         +   Q   L  +I ++  
Sbjct: 155 SRGVLYSKIQPNESTILHIFNTQLQSISNNPLVN-------QIRLNQLDELVKFILSKTS 207

Query: 200 ESLVPFVIAGDF 211
           +   P +I GDF
Sbjct: 208 KDEYPILICGDF 219


>gi|256086538|ref|XP_002579455.1| ap endonuclease [Schistosoma mansoni]
 gi|238664890|emb|CAZ35694.1| ap endonuclease, putative [Schistosoma mansoni]
          Length = 426

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 94/349 (26%), Gaps = 95/349 (27%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            +VR+ SWNIN L   +                  L+    +L +DI+ +QE  +   ++
Sbjct: 2   NRVRICSWNINGLRSIQHP----------------LKSILDSLTSDIICIQETKTTPDIS 45

Query: 82  KVFP-KNTWCIFYSTERLI-NHSKRDSN-------------------------NDIHTAI 114
           + F   + +  ++S       +S                              N+     
Sbjct: 46  REFAFADNYNGYFSHSIHKTGYSGTAVFCRNPLKPTKTFHSLNDILVESISCQNNSIDGW 105

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDS 172
              K+ + +       L A+           +          + + VL I+       + 
Sbjct: 106 GFLKRKLNISHTEARNLDAEGRVLGLQFSTDIFTTFRTPDEIRPLIVLSIYFPRLNPENV 165

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------------ 220
               Y             ++  I          VIAGDFN     + +            
Sbjct: 166 ERLNYKHLFQS------AVQLCIESLLIENN-VVIAGDFNICHKMIDHCAPDELMMDKFS 218

Query: 221 ---NDDFWKTI--------------------DPNDSLIRFPKEKDSRCNANKNL----RN 253
                 F + +                         L+   ++    C +++        
Sbjct: 219 NSFRQWFDQLLIEEQQDVSLDNQSSVGLRRFVDIFRLLHPHRKNAFTCWSSRTNARQTNY 278

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +DY + D    + +   S + I  +           SDHCPI  D 
Sbjct: 279 GVRLDYILFDMKLVEIITTISDNNIQAD----LMSHINGSDHCPIYADL 323


>gi|221505141|gb|EEE30795.1| endonuclease/exonuclease/phosphatase domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1002

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 43/130 (33%), Gaps = 6/130 (4%)

Query: 23  KVRLVSWNINTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            +R++++N+   S  +        ++ + TS   ++    +     I  LQE+ + +   
Sbjct: 343 SMRVMTFNVLAESLTDYKYRSLDQNIVKWTSRVNVIESEIRRHRPAICCLQELDATHYRK 402

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +  P      F S      + ++    +        +    +++Q               
Sbjct: 403 RFLP-----FFRSLGYEGVYKQKTHGREDGVGTFWLRDRFELVEQRGIEFRHHSKSLIDK 457

Query: 142 NRRAVELLVE 151
            +  + +L+ 
Sbjct: 458 PQVGLVVLLR 467


>gi|221483856|gb|EEE22160.1| endonuclease/exonuclease/phosphatase domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 993

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 43/130 (33%), Gaps = 6/130 (4%)

Query: 23  KVRLVSWNINTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            +R++++N+   S  +        ++ + TS   ++    +     I  LQE+ + +   
Sbjct: 343 SMRVMTFNVLAESLTDYKYRSLDQNIVKWTSRVNVIESEIRRHRPAICCLQELDATHYRK 402

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +  P      F S      + ++    +        +    +++Q               
Sbjct: 403 RFLP-----FFRSLGYEGVYKQKTHGREDGVGTFWLRDRFELVEQRGIEFRHHSKSLIDK 457

Query: 142 NRRAVELLVE 151
            +  + +L+ 
Sbjct: 458 PQVGLVVLLR 467


>gi|237836831|ref|XP_002367713.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211965377|gb|EEB00573.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Toxoplasma gondii ME49]
          Length = 1002

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 43/130 (33%), Gaps = 6/130 (4%)

Query: 23  KVRLVSWNINTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            +R++++N+   S  +        ++ + TS   ++    +     I  LQE+ + +   
Sbjct: 343 SMRVMTFNVLAESLTDYKYRSLDQNIVKWTSRVNVIESEIRRHRPAICCLQELDATHYRK 402

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +  P      F S      + ++    +        +    +++Q               
Sbjct: 403 RFLP-----FFRSLGYEGVYKQKTHGREDGVGTFWLRDRFELVEQRGIEFRHHSKSLIDK 457

Query: 142 NRRAVELLVE 151
            +  + +L+ 
Sbjct: 458 PQVGLVVLLR 467


>gi|159038547|ref|YP_001537800.1| endonuclease/exonuclease/phosphatase [Salinispora arenicola
           CNS-205]
 gi|157917382|gb|ABV98809.1| Endonuclease/exonuclease/phosphatase [Salinispora arenicola
           CNS-205]
          Length = 316

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 79/299 (26%), Gaps = 50/299 (16%)

Query: 29  WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPK 86
           WN+   +   G +               +        AD+V   E+  G Y A+      
Sbjct: 26  WNVAGNTMHHGSTTDGMVSG-------AVSSIVNR-SADVVAFNELCWGQYKAIQAGLNS 77

Query: 87  NTWCI----FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             W +    +         +    N +     A+  +    L   + L     +      
Sbjct: 78  AGWPVDTTNYSRFATSRGPTAGICNGNEDFGNAIFSRQPLGLASKFTLPSDGSNE----- 132

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           RR +     ++  ++     H+ +     S     +        Q  ++ D +     + 
Sbjct: 133 RRNLLCDNLVSTPRVRFCTTHITTSSATGSNGLPNN------VNQLNYVLDQLETYYAAG 186

Query: 203 VPFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLI------RFPKEK 241
              +IAGDFN + +Y   +  +               ++ +D NDS              
Sbjct: 187 DTVIIAGDFNAQPHYGRLDSWYSTTLTTVNNGGNKGNYRELDDNDSGNCIGYGEWTATGT 246

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGKRL-SDHC 296
                   + +    ID   + ++           S S                 SDH 
Sbjct: 247 PGATPPCASSQPLAKIDLTFVREDKIVGGYRGDSLSISTNCTGIPATPDYPAGSCSDHR 305


>gi|147780533|emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]
          Length = 1844

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 78/287 (27%), Gaps = 66/287 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++SWN   L               +     +++ +  +   D+V +QE        ++
Sbjct: 757 MKIISWNTRGLG--------------SKKKRRVVKNFLSSEKPDVVMIQETKKEECDRRL 802

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    +S       +   S       I +   ++++ ++   L             
Sbjct: 803 VGS-----VWSVRNKDWAALPASGASG--GILIIWDSIKMRREEVVLGSFS--------- 846

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V +   ++G          +S           S        +   +         S  
Sbjct: 847 --VSIKFAMDG---------CESLWLSAVYGPNNSALRKDFWVELSDIAGL------SHP 889

Query: 204 PFVIAGDFNRKINYLGN--NDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRNKI----- 255
            + + GDFN                 +   D  IR  +  DS   + +    N       
Sbjct: 890 RWCVGGDFNVIRRSSEKLGGSRLTPCMKDFDEFIRDCELIDSPLRSVSYTWSNMQENPVC 949

Query: 256 -PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +D F+               E ++ +       +  SDH PI ++
Sbjct: 950 KRLDRFLYSNE----------WEQVFPQSLQGVLPRWTSDHWPIVLE 986


>gi|312171429|emb|CBX79687.1| UPF0294 protein Ent638_0743 [Erwinia amylovora ATCC BAA-2158]
          Length = 268

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 88/286 (30%), Gaps = 63/286 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +   +++++ WNI                K+  +D+  + Q     +A +V LQE  +  
Sbjct: 39  TDGTRLKVLVWNIF---------------KQQRADWLSVLQDFGK-NAHLVLLQEAQTTP 82

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + + F  N + +       +          + +A A+        ++    L       
Sbjct: 83  ELVR-FATNNYLVADQVPAFVLPQHPSGVMTLASAHAIYCC-PLREREPLLRLSKS---- 136

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  V      N + + V++IH  +F     + +             + L     Q 
Sbjct: 137 -----ALVTAYPLPNDQVLMVVNIHAVNFSLGIDVYS-------------KQLGPIGEQI 178

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P ++AGDFN   +    N  +    +     +RF  +   +            +D
Sbjct: 179 IHHQGPVIMAGDFNAW-SRQRINALYRFAREMGLREVRFTDDHRRKAFGRP-------LD 230

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                     +  +      R SDH P+ +++DF
Sbjct: 231 FIFYRG---------------MDVTEASVLVTRASDHNPLLVEFDF 261


>gi|30231213|ref|NP_032411.3| type II inositol-1,4,5-trisphosphate 5-phosphatase [Mus musculus]
 gi|20809342|gb|AAH28864.1| Inositol polyphosphate-5-phosphatase B [Mus musculus]
 gi|123243911|emb|CAM16097.1| inositol polyphosphate-5-phosphatase B [Mus musculus]
          Length = 993

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 83/316 (26%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +                  L  D+  V  QE+         
Sbjct: 349 VGTYNVNGQSPKECLRPWLSHS---------------ALAPDVYCVGFQELDLSKEAFFF 393

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 394 HDTPKEEEWFKAVSESLHPDAKYAKVKFVRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 453

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q  Q       
Sbjct: 454 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFPQVDPSQPP 513

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N +I  L                   +D     +        F +
Sbjct: 514 LTINKHDVILWLGDLNYRIEELDVGKVKKLVEEKAFQTLYAHDQLKIQVAARTIFDGFTE 573

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + +     K              R     D  +           ++ +++ Y       
Sbjct: 574 GEITFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH---- 621

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+S  +D
Sbjct: 622 MALKTSDHKPVSSVFD 637


>gi|329946092|ref|ZP_08293728.1| endonuclease/exonuclease/phosphatase family protein [Actinomyces
           sp. oral taxon 170 str. F0386]
 gi|328527874|gb|EGF54862.1| endonuclease/exonuclease/phosphatase family protein [Actinomyces
           sp. oral taxon 170 str. F0386]
          Length = 334

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/343 (10%), Positives = 75/343 (21%), Gaps = 78/343 (22%)

Query: 24  VRLVSWNINTLSEQEG-----------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +R++S N+       G                +      +      +    L  D+V LQ
Sbjct: 4   IRVLSLNLQHGLLGAGAGDGSAATGSLAGADISDSATARAVMRATAEQIAELAPDVVALQ 63

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERL----INHSKRDSNNDIH----------------- 111
           E+    A +    +  +              +++                          
Sbjct: 64  EVDLGQARSGRLHQAAFLAEELGMPTCRFAASYAGPVVGLRRRPLRTALSSPTDDVLGLL 123

Query: 112 ----------TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR--AVELLVEINGKKIWV 159
                        A+  +          L     S  + G R        V    ++I V
Sbjct: 124 RAAVGAGPIGYGNALLSRFPVSGWHVKRLGRGASSVEKRGERAWDPRSYHVSTASQRIMV 183

Query: 160 LDIHLKSFCFLDSLEN---TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
                       S+       +   +  S  A+ L D          P ++ GD+N    
Sbjct: 184 AATLEVPDDVGGSVRRLSVASTHLATRESMAARQLADAWGALAGLPGPHLLVGDYN---- 239

Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD-----QNAYKFLI 271
                      +                 +          ID+ + D      +      
Sbjct: 240 -----------LSAEQVAALGLGRTVGEGHTFPAANPHRRIDHVLTDLWPTGPDGLPLAD 288

Query: 272 QESFSEIL-----------YNEDDIKSRGKRLSDHCPISIDYD 303
           + + +                  D  +    +SDH    +D +
Sbjct: 289 EAAVAAAGTAGADGAGSPLLRAVDWGTASFIISDHVGTWVDLE 331


>gi|311270959|ref|XP_003133018.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A-like [Sus scrofa]
 gi|311270961|ref|XP_003133022.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A-like [Sus scrofa]
          Length = 1006

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 77/317 (24%), Gaps = 49/317 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +    ++ D               + LQE+ S     + 
Sbjct: 423 ITVVTWNVGTAMPPDDVTSLLHLGSSSSDDSDR-ADMIA------IGLQEVNSMINKRLK 475

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S   +   I +   +  ++  L+             
Sbjct: 476 DALFTDQWSELFMDALGPFNFVLVSTVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 535

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +    Q 
Sbjct: 536 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAQG 591

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 592 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSEQLHQLWEKDQLNMAKNTWPILKGFQEGP 651

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              +E     +      
Sbjct: 652 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPGGGPSPSGRERHRLQVTQHSYR 711

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 712 SHMEYTVSDHKPVAAQF 728


>gi|281185510|sp|P32019|I5P2_HUMAN RecName: Full=Type II inositol-1,4,5-trisphosphate 5-phosphatase;
           AltName: Full=75 kDa inositol
           polyphosphate-5-phosphatase; AltName:
           Full=Phosphoinositide 5-phosphatase; Short=5PTase;
           Flags: Precursor
 gi|55665969|emb|CAH69928.1| inositol polyphosphate-5-phosphatase, 75kDa [Homo sapiens]
 gi|55666459|emb|CAH70080.1| inositol polyphosphate-5-phosphatase, 75kDa [Homo sapiens]
          Length = 993

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 340 TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 397

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 398 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 457

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 458 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 517

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 518 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 577

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 578 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 625

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 626 TSDHKPVSSVFD 637


>gi|329113454|ref|ZP_08242235.1| Endonuclease/Exonuclease/Phosphatase [Acetobacter pomorum DM001]
 gi|326697279|gb|EGE48939.1| Endonuclease/Exonuclease/Phosphatase [Acetobacter pomorum DM001]
          Length = 227

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 78/288 (27%), Gaps = 85/288 (29%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              +   + VR++SWN+               ++RT +    +    +    D++ +QE 
Sbjct: 19  SFVSCDMEGVRIISWNL---------------LRRTGATVHDIAALIEAEKPDVLLMQEA 63

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                        T  I    + +  H  R+        +A   +           + + 
Sbjct: 64  -------------TIEIDVLPDVIGGHYARNPQPGRIHGVACWSRIPFARAPRACTIPSG 110

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
             F     R A  +  E       + ++HL     L+              +Q + L   
Sbjct: 111 PLFK----RHAQIIEYE----NFSLANVHLSHGQMLN-------------RKQLRRLATL 149

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           ++       P  I GDFN               +     +  F                 
Sbjct: 150 LS------PPCAILGDFN---------------LLGPTLVPGFKDVGPKAPTHRMVDLLP 188

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           I ID  ++     + +   S   +              SDH PI++  
Sbjct: 189 IRIDRCLV-----EGMQCLSARVLPV----------FASDHRPIAVTL 221


>gi|308235880|ref|ZP_07666617.1| endonuclease/exonuclease/phosphatase family protein [Gardnerella
           vaginalis ATCC 14018]
 gi|311115024|ref|YP_003986245.1| endonuclease/exonuclease/phosphatase [Gardnerella vaginalis ATCC
           14019]
 gi|310946518|gb|ADP39222.1| endonuclease/exonuclease/phosphatase [Gardnerella vaginalis ATCC
           14019]
          Length = 356

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/282 (10%), Positives = 75/282 (26%), Gaps = 49/282 (17%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++++R+++ N                     ++ + + + AK    D + LQE+ S   V
Sbjct: 116 SREIRVMTLNCRY----------------GRANASQIIKLAKTHKIDTILLQEV-SKKLV 158

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +        F   +    +   +   +         K+             K     A
Sbjct: 159 KNLEKLGIKRDFAHVQLGSANGHENGGFNAIYTRLSNVKSF-----------GKSIKIDA 207

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            N   V  +   +  +  ++                +S     L++  +   +     K+
Sbjct: 208 ANVPIVTAVTRDSSAENLLITFASAHPKSPMRGCAAWSSGIMALAKIGENHNE--NNVKD 265

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPID 258
                +I GD N   ++                      +   R       +    + +D
Sbjct: 266 VKKVKIIGGDLNSTPDHPSFRALLKSGFLD------ASMQIGKRLKTWPTWQKWPNLALD 319

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           + ++         + +    +  E          SDH  + +
Sbjct: 320 HVLV---------KSTGCNAIATEQRAIRVD--GSDHFALIV 350


>gi|156344739|ref|XP_001621294.1| hypothetical protein NEMVEDRAFT_v1g222142 [Nematostella vectensis]
 gi|156207077|gb|EDO29194.1| predicted protein [Nematostella vectensis]
          Length = 131

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 42/116 (36%), Gaps = 8/116 (6%)

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF--PKEKDSRCNAN 248
           +  ++ QK+   +P ++ GDFN         +  ++ +  +     +     +++     
Sbjct: 16  IDKFLKQKELHSIPVILTGDFN-----SPETNPVYQFVKGSGFASSYKVVNGREAGVTHK 70

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQ-ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +   ++ +DY     +    +    S        D +      +SDH  I  ++D
Sbjct: 71  DHRGRELSVDYIFYRNSGSCAISPKSSIMLPQQYNDQVWPEEFTISDHRMIVTEFD 126


>gi|37590185|gb|AAH58932.1| INPP5B protein [Homo sapiens]
          Length = 748

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 260 TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 317

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 318 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 377

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 378 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 437

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 438 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 497

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 498 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 545

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 546 TSDHKPVSSVFD 557


>gi|2072948|gb|AAC51261.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 69/292 (23%), Gaps = 75/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ NIN L+              +         + K+ D  +  +QE          
Sbjct: 8   ITILTLNINGLN--------------SAIKRHRRASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                           
Sbjct: 45  -HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAIL-------VSDKTDFKPTKIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +       +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFLAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +       +                   LSDH  I ++ 
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEIIT------------NYLSDHSAIKLEL 237


>gi|241691941|ref|XP_002412935.1| carbon catabolite repressor protein, putative [Ixodes scapularis]
 gi|215506737|gb|EEC16231.1| carbon catabolite repressor protein, putative [Ixodes scapularis]
          Length = 292

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 69/229 (30%), Gaps = 38/229 (16%)

Query: 27  VSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
           + +N+  +  + ++      +           +    ++  ADI+ LQE+ +        
Sbjct: 1   MCYNVLCDKYATRQVYGYCPSWALSWEYRRKGIMDEIRHYSADIISLQEVETEQFHGFFL 60

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLL--------- 131
           P+     +       + +K  S  D       AI  R     +L++              
Sbjct: 61  PELKRDGYDGIFSPKSRAKTMSEGDRKHVDGCAIFYRTNKFILLKEHLVEFNQLAMANAE 120

Query: 132 GAKDSFSRAGNR--RAVELLVEINGKKIWV----------LDIHLKSFCFLDSLENTYSP 179
           G+ D  +R   +    +  L++I    +            L +      +     +    
Sbjct: 121 GSDDMLNRVMTKDNIGLAALLQIKDGALDNGTSTCTIQAPLLVCTAHIHWDPEYCDVKLI 180

Query: 180 SCSLLSQQAQWLKDWITQKKES-----------LVPFVIAGDFNRKINY 217
              +L ++ + + +   Q   S            VP ++ GD N   + 
Sbjct: 181 QTMMLMRELRSIVEEAVQVLRSAPHRRGNPDTGSVPLLLCGDMNSLPDS 229


>gi|300715428|ref|YP_003740231.1| Endonuclease/exonuclease/phosphatase family protein [Erwinia
           billingiae Eb661]
 gi|299061264|emb|CAX58373.1| Endonuclease/exonuclease/phosphatase family protein [Erwinia
           billingiae Eb661]
          Length = 267

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 86/296 (29%), Gaps = 73/296 (24%)

Query: 13  LVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70
            +P    +     +R++ WNI                K+  +D+  + Q     DA +V 
Sbjct: 31  ALPPGTPLTTESTLRVLVWNIF---------------KQQRADWLSVLQNFGK-DAHLVL 74

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130
           LQE  +   + +    N                  ++     A+      V  L  ++P+
Sbjct: 75  LQEAQTTPELVRFATSN---------------YLAADQVPAFALPQHPSGVMTLASAHPV 119

Query: 131 LGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
                       R +   LV      N + + V++IH  +F     + +           
Sbjct: 120 YCCPLREREPLLRLSKSALVTAYALPNDQMLMVVNIHAVNFSLGIDVYS----------- 168

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             + L     Q      P ++AGDFN             +             E+ S  +
Sbjct: 169 --KQLGPIGEQIIHHRGPVIMAGDFNAWSR--------QRINALYTFARDMGLEEVSFTD 218

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            ++      P+D+                        +      R SDH P+ +++
Sbjct: 219 DHRRKAFGRPLDFVFYRG---------------LGVAEASVLVTRASDHNPLLVEF 259


>gi|242096370|ref|XP_002438675.1| hypothetical protein SORBIDRAFT_10g024140 [Sorghum bicolor]
 gi|241916898|gb|EER90042.1| hypothetical protein SORBIDRAFT_10g024140 [Sorghum bicolor]
          Length = 1525

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 21/157 (13%)

Query: 154  GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN- 212
            G       + +KS  F+  L N Y P+        ++L++     + S +P ++ GDFN 
Sbjct: 957  GNFFQSCTLTMKSDGFVWKLVNVYGPAHDDRK--LEFLEEIQNLVQNSELPVLLGGDFNL 1014

Query: 213  -RKINYLGNNDDFWKTIDP-NDSLIRFPKEKDSRCNANKNLRNKI------PIDYFVMDQ 264
             RKI    + +   + +D  N+ +     ++  R  +     NK        +D  ++  
Sbjct: 1015 VRKIEEKSSGNVDLQMMDAFNEMINTTELKEVIRTGSRYTWSNKQKPPIMCVLDRVLVSN 1074

Query: 265  NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +           E  +N   + +  +  SDH P+ +D
Sbjct: 1075 S----------WEDNFNMTAVLTAPRVGSDHNPLIVD 1101


>gi|218192410|gb|EEC74837.1| hypothetical protein OsI_10683 [Oryza sativa Indica Group]
          Length = 495

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 63/216 (29%), Gaps = 27/216 (12%)

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + VR    R ++++             GN+ AV +   ++     V   HL S       
Sbjct: 233 VWVRADLARFVRRASVSCVGCGVMGCLGNKGAVSVRFWLHDTSFCVACCHLASGGRDGDE 292

Query: 174 ENTYSPSCSL--LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG------NNDDFW 225
            +  + +  +   +   +     + QK       ++ GD N +I+              W
Sbjct: 293 AHRNADATEILSRTTFPRGHSLNLPQKILDHDRVILLGDLNYRISLPEAKTRLLVERQDW 352

Query: 226 KTIDPNDS-----------LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-------AY 267
           KT+  ND               + +   +     K   N     Y             A 
Sbjct: 353 KTLLENDQLRSEVESEGGAFHGWNEGAIAFSPTYKYYPNSDTY-YGCASHGRKGEKRRAP 411

Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            +  +  +      +        RLSDH P+   ++
Sbjct: 412 AWCDRILWRGAGLKQKRYDRCESRLSDHRPVRALFE 447


>gi|225458669|ref|XP_002282902.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 695

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/272 (9%), Positives = 62/272 (22%), Gaps = 51/272 (18%)

Query: 39  GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98
           G           +    +++   +    D+  +QE         V        F   + L
Sbjct: 90  GWKEKGRRGVNESRKRKVIKSVVRKQKVDLFCIQETKIQLMFESVVRSLGSGRFLEWKAL 149

Query: 99  INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158
                          + +      +    + +     S+        V            
Sbjct: 150 NACGSTG-------GMLICWDKRVLELLEWEVGQFSLSYRFKTLENGVIWAFTGVYGPFT 202

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
                                    L ++   ++           P+ + GDFN  +   
Sbjct: 203 -------------------RLEREGLWEKVGAIRGIWEG------PWCLGGDFNITLAQG 237

Query: 219 GNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
             N           F + +D    +               N  ++  +D F++       
Sbjct: 238 ERNRQGRITSAMRRFAEVVDDLGLVDIQLHGGAFTWTGGLNNMSRARLDRFLVSP----- 292

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                     ++    +   + +SDH P+ ++
Sbjct: 293 -----CWLDQFSRVCQRRLPRPISDHFPVLLE 319


>gi|222632149|gb|EEE64281.1| hypothetical protein OsJ_19117 [Oryza sativa Japonica Group]
          Length = 911

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 69/261 (26%), Gaps = 51/261 (19%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
            ++   LL++  K  D DIV LQE    N   +          +S     +         
Sbjct: 457 NSARRGLLKEMIKLRDIDIVGLQETKRENFSNRELNSFQGSKTFSWAWKASRGASGGILL 516

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
                 V    V +++                    +         +I V+      +  
Sbjct: 517 G-----VNTDKVELIRNHV---------GAYFLSCVIRHKFNQKTWEIVVV------YGP 556

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------- 221
           +         S      Q            +S  PF+I GDFN        +        
Sbjct: 557 VTDSLKQSFLSELSWHLQ------------DSPHPFIIGGDFNPYRFAKEKSNSNLDFRA 604

Query: 222 -DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
            D F   I   D                ++   +  +D  ++ Q            E +Y
Sbjct: 605 MDLFNSFILDMDLSELHRSGARFTFTNKQDCPTQEVLDRVLVSQ----------LWEAIY 654

Query: 281 NEDDIKSRGKRLSDHCPISID 301
               + S  +  SDH P+ +D
Sbjct: 655 PISTLLSITRIGSDHSPLILD 675


>gi|147838411|emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]
          Length = 1802

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 73/288 (25%), Gaps = 66/288 (22%)

Query: 23   KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             ++++SWN   L               +     +++ + ++   DIV +QE        +
Sbjct: 779  DIKIISWNTRGLG--------------SRKKRRVVKDFLRSEKPDIVMIQETKKAECDRR 824

Query: 83   VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                                           I V   + ++  +   L            
Sbjct: 825  FVGSL-------WTARNKEWAVLPACGASGGILVMWDSKKLHSEEVVLGSFS-------- 869

Query: 143  RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
               V +   ++G + + L                   S +L     + L D         
Sbjct: 870  ---VSVKFAVDGSEQFWLSAVYGP------------NSTALRKDFWEELSDIFGLSSPC- 913

Query: 203  VPFVIAGDFNR---------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
              + + GDFN                +  D    I  N+ +    +      +  +    
Sbjct: 914  --WCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELIDPPLRSASFTWSNMQEHPV 971

Query: 254  KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F+               E L+ +       +  SDH  I ++
Sbjct: 972  CKRLDRFLYSNE----------WEQLFPQXLQDVLPRWTSDHWXIVLE 1009


>gi|19424246|ref|NP_598246.1| phosphatidylinositol 4,5-bisphosphate 5-phosphatase A [Rattus
           norvegicus]
 gi|30315961|sp|Q9JMC1|PI5PA_RAT RecName: Full=Phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A; AltName: Full=Inositol polyphosphate 5-phosphatase J;
           AltName: Full=Proline-rich inositol polyphosphate
           5-phosphatase
 gi|6906704|dbj|BAA90553.1| proline-rich inositol polyphosphate 5-phosphatase [Rattus
           norvegicus]
 gi|149047511|gb|EDM00181.1| phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A [Rattus
           norvegicus]
          Length = 1001

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 76/317 (23%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      SD               + LQE+ S     + 
Sbjct: 420 ITVVTWNVGTAMPPDDVTSLLHLGGGHDSDG---ADMIA------IGLQEVNSMINKRLK 470

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S   +   I +   +  ++  L+             
Sbjct: 471 DALFTDQWSELFMDALGPFNFVLVSTVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 530

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +      
Sbjct: 531 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAHG 586

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 587 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSNQLHQLWEKDQLNMAKNTWPILKGFQEGP 646

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              +ES    +      
Sbjct: 647 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPSGGPSPSGRESHRLQVTQHSYR 706

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 707 SHMEYTVSDHKPVAARF 723


>gi|325845494|ref|ZP_08168785.1| exodeoxyribonuclease III [Turicibacter sp. HGF1]
 gi|325488513|gb|EGC90931.1| exodeoxyribonuclease III [Turicibacter sp. HGF1]
          Length = 215

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/247 (7%), Positives = 60/247 (24%), Gaps = 58/247 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++ +SWN+N L                         + +    D + +QE          
Sbjct: 1   MKFISWNVNGLRACVKKGF---------------LDFVEAEQPDFLCVQETKLQEG-QID 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  +++           +    ++  A+  K+  +       +   D   R    
Sbjct: 45  LQLDGYYQYWN----------YAVKKGYSGTAIFTKHEPLQVTYGLNIAEHDQEGR---- 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++ +     +++ ++  +     +  +               L            
Sbjct: 91  -----VITLEYNDFYLVTVYTPNSQNELARLDYRLTWEEAFRNYLIGLDVL--------K 137

Query: 204 PFVIAGDFNRKINYLGNNDDF---------------WKTIDPNDSLIRFPKEKDSRCNAN 248
           P ++ GD N     +   +                    +  +  +  F     ++ N  
Sbjct: 138 PVIVCGDLNVAHQQIDLKNPKTNTKNAGFTIEERNEMTKLLNSGFIDTFRYFYPTKENCY 197

Query: 249 KNLRNKI 255
                + 
Sbjct: 198 SWWSYRA 204


>gi|147866531|emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera]
          Length = 1232

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 36/109 (33%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  +     +           F + +D  + +    +  +   +   N +
Sbjct: 13  GDPWCLGGDFNITLFQHERSSQRRISSAMRRFAQIVDDLELVDLPLQGGEFTWSGGLNNQ 72

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F++  +              ++        +  SDH PI ++
Sbjct: 73  AWARLDRFLVSPS----------WLDQFSGVTQGRLSRPTSDHFPIVLE 111


>gi|153006343|ref|YP_001380668.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
 gi|152029916|gb|ABS27684.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
          Length = 340

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/328 (12%), Positives = 87/328 (26%), Gaps = 72/328 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---------------- 66
            V LV+WN+      + V+    +          +    +  D                 
Sbjct: 35  TVELVTWNVLHGGRFDRVTS--AAPADIPRAIDEVWAEMEASDPAGRMRAVAAGIAAARP 92

Query: 67  DIVFLQEMG-------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
           D+V LQE               +Y+    V  +           ++  +   +      A
Sbjct: 93  DLVGLQEAALWRSEPRDGSAAVAYDLAQLVLDELRILGAPYALAVVAAASDATLPGARAA 152

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAG---------------NRRAVELLVEINGKKIW 158
                ++V + ++   +   +     AG                R    + VE++G +  
Sbjct: 153 YRFTDRDVILAREGLAVSNPRSGRFDAGLQLPLPIPGGGSSRIPRAWTSVDVELDGGRFR 212

Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218
            +  HL++   + +              QA  L D       S +P V+ GDFN      
Sbjct: 213 FVSTHLETVEAVSTA-------------QAAELVD----VAGSDLPVVLVGDFNSAPGDP 255

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR---NKIPIDYFVMDQNAYKFLIQESF 275
                    +   D+         + C    +         +D  +      + +     
Sbjct: 256 AYELLVSGPVGLRDAWEAGAGPGLTCCREQVDDPAAALTQRVDLILHRGFTARTIALLGA 315

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303
               +        G   SDH  ++   +
Sbjct: 316 EAASFQ------AGHWPSDHAGVAATLE 337


>gi|332017071|gb|EGI57870.1| CCR4-NOT transcription complex subunit 6-like-B [Acromyrmex
           echinatior]
          Length = 455

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 44/183 (24%), Gaps = 34/183 (18%)

Query: 155 KKIWVLDIHLKSFCFLDSLENTY----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210
           + I V   H+        ++       S     +  QA        +   S V  ++ GD
Sbjct: 258 QPILVCTAHIHWDPEFCDVKLIQTMMLSNELRSILDQAGQSFRPGHKPDSSNVQLLLCGD 317

Query: 211 FNRKINYLGN-------------------NDDFWKTIDPNDSLIRFPKEKDSRC------ 245
           FN   +                            + I   D    F              
Sbjct: 318 FNSLPDSGVIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDI 377

Query: 246 --NANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               N     K  IDY    + +      L   S      ++          SDH P+ +
Sbjct: 378 MPYTNYTFEFKGIIDYIFYSKQSMVPLGLLGPLSPEWFKEHKVVGCPHPHVPSDHFPLLV 437

Query: 301 DYD 303
           + +
Sbjct: 438 ELE 440


>gi|37524700|ref|NP_928044.1| hypothetical protein plu0699 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|39932491|sp|Q7N8M0|Y699_PHOLL RecName: Full=UPF0294 protein plu0699
 gi|36784125|emb|CAE12994.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 260

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 85/288 (29%), Gaps = 71/288 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +   ++R+V WNI           +K            L   ++     ++ LQE  +  
Sbjct: 39  TGTNELRVVVWNI-----------YKQQRPSWRKVLKELTNESQ-----LILLQEAQTTP 82

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +    N                  S+      +      V  L  S+P+        
Sbjct: 83  DLVEFATSN---------------YLISDQVPAFLLPQHPSGVMTLATSHPVYCCPLREK 127

Query: 139 RAGNR----RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R      + + +  + +++ V+++H  +F F   + +               L + 
Sbjct: 128 EPLLRLSKSALITVYLLQDNRQLMVINVHAINFSFGVDVYSR-------------QLNNI 174

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
               +    P ++AGDFN             +             E+ S  +  + +   
Sbjct: 175 GVHVRLHNGPVIMAGDFNAWSK--------QRLNALKRFTRYLHLEEVSFTDDYRTIAFG 226

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            P+D+    +     L   +   I  +           SDH P+ +++
Sbjct: 227 RPLDFIFYRE-----LNIANAIVIPTD----------ASDHNPLVVNF 259


>gi|325124403|gb|ADY83926.1| hypothetical protein BDGL_003340 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 369

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/251 (10%), Positives = 61/251 (24%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL +  + L  D++   E  +            W             +     D  
Sbjct: 114 DKYHLLLEQIRTLKPDLLLTLESDTT-----------WENALREIESDYPYRVPVPLDNL 162

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   +L  +              +   +G  + +  +H K     +
Sbjct: 163 YGMHLYSRLPLSNTEVKFILSDEIPSIHT-------TVTLRSGMPVQLYCLHPKPPSPTE 215

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++T   +          L     Q K+     ++ GD N            ++ I   
Sbjct: 216 AKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS-- 262

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +    ++     
Sbjct: 263 GLLDPRVGRHFINTFHADYPLLRWSLDHIFHS--------------TDFGLVKMQRLPHV 308

Query: 292 LSDHCPISIDY 302
            SDH P+ +  
Sbjct: 309 GSDHFPVYVVL 319


>gi|315498207|ref|YP_004087011.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
 gi|315416219|gb|ADU12860.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
          Length = 294

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 60/249 (24%), Gaps = 58/249 (23%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             L  +    + D+V + E     A   +  K                    +       
Sbjct: 99  ERLLDWVTAENPDVVAIVEA-GPLAEETLAAKLRQT--------------YPHMARRYDT 143

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            V  +      ++ P+  +            + + V        +   HL       +  
Sbjct: 144 FVFSRYPLTRPRARPIGYS-----------LLTVEVGAPAGAFNLAVSHLTRPWPFSAPG 192

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
           N           Q + L+  +  ++      V+ GDFN   +  G  D           L
Sbjct: 193 NQPR--------QLERLRADLRDERPERT--VLVGDFNTTPSASGLMDFSRN-------L 235

Query: 235 IRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
             F                 +I ID     Q                   + K+     S
Sbjct: 236 GLFAAPAPVGTWPAVLPAPLRIGIDNAFAGQALSLR--------------NRKAGPYYGS 281

Query: 294 DHCPISIDY 302
           DH PI +D 
Sbjct: 282 DHRPIRVDI 290


>gi|118368477|ref|XP_001017445.1| hypothetical protein TTHERM_00481340 [Tetrahymena thermophila]
 gi|89299212|gb|EAR97200.1| hypothetical protein TTHERM_00481340 [Tetrahymena thermophila
           SB210]
          Length = 370

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/268 (10%), Positives = 74/268 (27%), Gaps = 36/268 (13%)

Query: 15  PCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
            C +S +  + +++ ++N+   +  + ++++  + +R       L       D DI+ L 
Sbjct: 82  SCFSSQSCNKNLKIGAFNVLWGNSNKFINMFNRNEQRFNYIINKL---IPQTDPDILSLL 138

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+                 F        H + +          +   +  V+    P   
Sbjct: 139 EVSEQ--------------FMEMLTSNQHIRNNYYLSHVKRKRIDYVHEVVMISKLPFSS 184

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              +    G          +      VL  H       D +  +       LS Q     
Sbjct: 185 IFMNDDDYGRCIFSIFTDSVPSNSFMVLTSHF-WAYEQDYVSRSKQMELIDLSIQTNSFL 243

Query: 193 DWITQK---------KESLVPFVIAGDFNRKINYLGNNDDFWKTID-------PNDSLIR 236
           + +                   ++ GD N  + +  +    +  +D        +D    
Sbjct: 244 ENVNLPVKIQKAALEASQKSNIILQGDLNLHLKHEDSFIYKFGFVDVWREIYPHDDGYTW 303

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
             ++     +       ++ +D  ++  
Sbjct: 304 DAQKNKFVKSIYILDNRRMRLDRILLRN 331


>gi|218662309|ref|ZP_03518239.1| putative phosphatase protein [Rhizobium etli IE4771]
          Length = 102

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 23/111 (20%)

Query: 204 PFVIAGDFNRKINYLGNNDD-------FWKTIDPNDSLIRFPKEKDSRCNANKN-----L 251
            +VI GDFN +      +         + +       +  F   +  R  +         
Sbjct: 1   DYVIMGDFNMEPESPEYSALAGAAGGYYGRVARIGTPVDAFATLEAYRPESYSWMDPEDH 60

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             ++ +DY  +       L                      SDH P+ ++ 
Sbjct: 61  GKRMHLDYCFVSCGLVSRLKSARI-----------DTQSVGSDHFPLWVEI 100


>gi|118587710|ref|ZP_01545120.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614]
 gi|118439332|gb|EAV45963.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614]
          Length = 320

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/291 (9%), Positives = 68/291 (23%), Gaps = 59/291 (20%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
               + +    + + + N+                  + +    L +       D++ L 
Sbjct: 81  FAASSDAAEPAISVATANLFG----------------SAAALDNLIEENSARAFDLMILT 124

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+      A +           T                 A  +  +         P+  
Sbjct: 125 ELPVPADKALLDRFQGMLHVAGTPDQA--------LGGRPAAIILSRIAPRSVDLIPVDR 176

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              + ++     AV   V+            L  F                   QA  L+
Sbjct: 177 NPYAITK-----AVYCSVQAEPCMSVFAVHTLPPFRRD------------FYLHQADILQ 219

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
              ++  ++  P ++AGD N             +  +           + +         
Sbjct: 220 KLASEVSKTPGPVLVAGDMNAASWAP----LLKRFQETAGVRKAVCGSRWTPTWLAPVPG 275

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             + +D+F +                     + +      SDH P+  ++ 
Sbjct: 276 IGLELDHFFVKDGLAVK--------------NCELGHFNGSDHWPVFAEFT 312


>gi|85058565|ref|YP_454267.1| hypothetical protein SG0587 [Sodalis glossinidius str. 'morsitans']
 gi|84779085|dbj|BAE73862.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 395

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 84/299 (28%), Gaps = 77/299 (25%)

Query: 13  LVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--I 68
            +P    +     +R++ WNI                              +    D  +
Sbjct: 31  ALPPGEPLPGSRILRVMVWNI------------------FKQQRANWLSVLQGFGKDTQL 72

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           V LQE  +   + +    +    + + +++         +            V  L  ++
Sbjct: 73  VLLQEAQTTPELVRFATSH----YLAADQVPALIFPQHPSG-----------VMTLSAAH 117

Query: 129 PLLGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           P+            R A   LV +    NG+ + V++IH  +F     + +         
Sbjct: 118 PVYCCPLREREPLLRLAKSALVTVYPIHNGQLLMVVNIHAVNFSLGIDVYSK-------- 169

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244
             Q   + + I        P ++AGDFN            +        +     ++   
Sbjct: 170 --QLDPIGEQIRNHSG---PVIMAGDFNAWSRQRMLALYRFAEQMGLGEVRFVDDQRR-- 222

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                      P+D+          +     S ++             SDH P+ ++++
Sbjct: 223 ------RAFGRPLDFVFYRD-----MNVCEASVLVTE----------ASDHNPLLVEFE 260


>gi|225449792|ref|XP_002271720.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 2499

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 39/144 (27%), Gaps = 25/144 (17%)

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--- 223
           + F              L ++   ++           P+ + GDFN  +     + +   
Sbjct: 859 WVFPGVYGPFSREDRECLWEELGAIRGLWE------EPWCLGGDFNTTLYQAERSRNGRI 912

Query: 224 ------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                 F + ID         +      +   N +    +D F+   N      +     
Sbjct: 913 TLAMRRFAQIIDNLGLADVPLQGGSLTWSGGLNNQTWARLDRFLATPNWLDQYSRVLQRR 972

Query: 278 ILYNEDDIKSRGKRLSDHCPISID 301
           +              SDH P+ ++
Sbjct: 973 LPCPT----------SDHFPVLLE 986


>gi|119714683|ref|YP_921648.1| endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614]
 gi|119535344|gb|ABL79961.1| Endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614]
          Length = 366

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 66/245 (26%), Gaps = 13/245 (5%)

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
           R+  +    D+V  QE   +  V    P      F         +   + +   +  A+ 
Sbjct: 132 RRLTRRPGLDVVGWQEADRFGRVLHSLPGWDTKTF----PFGRRNSEIAVSWRRSEFALV 187

Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177
               R + Q       +  F        V L     G+ + V+D HL       S    +
Sbjct: 188 SARQRQVAQGVSWRDGRYPFGNRMV-GVVTLRHRDTGRLLTVVDAHLPQAIEDLSRPGRW 246

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
           +P+ +    + Q  +   T +       V  GD+N        +                
Sbjct: 247 TPTINAYRARNQLARIATTWRSAPGRWVVGTGDYNFDARADARHRPRGGPRRALADTAVS 306

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
             +      A     N   IDY  +D+ A        +             G   SDH  
Sbjct: 307 SYQALGADVAPTFPSNGRRIDYVYVDRAA--------YRAEQMRFTGQWVVGGFASDHNA 358

Query: 298 ISIDY 302
           +    
Sbjct: 359 LVTRL 363


>gi|326673688|ref|XP_003199958.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1-like [Danio
           rerio]
          Length = 953

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 78/316 (24%), Gaps = 67/316 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYNAVAKV 83
           + +WN+N  S    +  W +S                    D+  +  QE+         
Sbjct: 306 VGTWNVNGQSPDSSLGPWLSSDPDP---------------PDVYALGFQELDLSTEAFFY 350

Query: 84  FPKNTWCIFYSTERLINHS---KRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDS 136
              +   ++        H                   + ++K++   +++          
Sbjct: 351 MDSSKEQLWVDAVERGLHQKARYIQVRIIRLVGMMLVVYIKKEHKDQIREIASESVGTGL 410

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            ++ GN+  V +    +      ++ HL +        N               L ++  
Sbjct: 411 MNKMGNKGGVAVRFVFHNTSFCFVNSHLAAHVDDFERRNQDYKDICARMSF--HLLEYPP 468

Query: 197 QKKESLVPFVIAGDFNRK---INYLGNNDDF----WKTIDPNDSLIR-------FPKEKD 242
                    +  GD N +    +             + +   D L         F    +
Sbjct: 469 VSIVKHDVVIWLGDLNYRLCLPDAGEVKRLIAEKELRRLQEYDQLNLQRKTKRVFTDFME 528

Query: 243 SRCNANKNLRNKI-----------PI----DYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
              N     +               I    D  +   +  K L   S  E+         
Sbjct: 529 GEINFIPTYKYDAKSDRWDSSGKCRIPAWCDRILWRGSNVKQLHYRSHMEL--------- 579

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+S  + 
Sbjct: 580 ---KTSDHKPVSSVFS 592


>gi|260775266|ref|ZP_05884163.1| hypothetical protein VIC_000636 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608447|gb|EEX34612.1| hypothetical protein VIC_000636 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 285

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/329 (13%), Positives = 90/329 (27%), Gaps = 76/329 (23%)

Query: 1   MIRKYVLALVFFLVPCT----------ASVAQKVRL-------------VSWNINTLSEQ 37
           M +K +L L   ++                 Q + +              S N+  +   
Sbjct: 1   MKKKRLLILPIVVLAAVVGGFQLTFSLPKQPQLLTISPSGEDISMRCTHAS-NVEPIDNN 59

Query: 38  EGVSL--WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95
             ++L  W    +   +    L +Y+      +V LQE      + +   +  W      
Sbjct: 60  GNINLLVWNIYKQNRGNWSQELTKYSSEKQ--LVLLQEASMTAELKEWMKQQLW------ 111

Query: 96  ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NG 154
               N        +    +    K++  L  +Y  L           + A+     + +G
Sbjct: 112 --FGNQVDAFKAFERSAGVLNLSKSLPKLACAYTELEP----WLRLPKSAIYATYPLSDG 165

Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214
           + + V++IH  +F +                     L   + +  +   P ++AGDFN  
Sbjct: 166 QVLSVVNIHAVNFTYGTDEYQR-------------QLGTLVDELSKHQGPIIVAGDFNSW 212

Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274
                        +D         KE   R +        +P+D+               
Sbjct: 213 --SADRMAVMRSALD-----TLGVKEVSYRPDHRTQFITGLPLDHVFYRGLTLIKAEA-- 263

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                             SDH P+ + + 
Sbjct: 264 -------------PESDASDHNPLEVTFS 279


>gi|118377424|ref|XP_001021891.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89303658|gb|EAS01646.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 368

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/294 (10%), Positives = 78/294 (26%), Gaps = 38/294 (12%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  + +++ ++N+      + ++++  + KR T     +       D D++ L E+    
Sbjct: 30  SQQRNLKIGTYNVLFGMPSKILNIYSRNKKRFTHIIENI---IPETDPDVLSLMEVTQE- 85

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                         +    L N   R +    H +   +++   V   S     +     
Sbjct: 86  --------------FKDMLLSNPYIRQNYYVSHVSKIYQRRLFEVFVISKQPFTSIYLVD 131

Query: 139 RAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS--------QQAQ 189
               R    +       K   ++  HL +               +           +   
Sbjct: 132 SKQGRYQFSIFHNQEVWKSFILISTHLWAGEGDFGSRQKQLSLVNQCILDRNFLNSRHIN 191

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---- 245
                I          ++ GD N  + +          ID    +  F            
Sbjct: 192 DTIKQIANIAIQNNNIILQGDLNLHMRHEDAYIYENGFIDTYREIYPFQDGYTWDSAQNN 251

Query: 246 ---NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              +       ++ +D  ++ ++   F       ++     +    G   SDH 
Sbjct: 252 FINSVFIFDDRRMRLDRILLRKSCNLF----QIQDVKILGKEKIGIGLCASDHY 301


>gi|190892782|ref|YP_001979324.1| endonuclease/exonuclease/phosphatase family protein [Rhizobium etli
           CIAT 652]
 gi|190698061|gb|ACE92146.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CIAT 652]
          Length = 310

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 71/280 (25%), Gaps = 69/280 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
            RL+S+NI   +   G                 +   A    AD+V + E     + + +
Sbjct: 95  FRLMSFNIENDNFANGG---------------AIADMAIASGADVVNILEAEPVLSELPR 139

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     + +                        V  K   +  +   L           N
Sbjct: 140 LLKTYPYYV------------GCGIGMQQCDTLVLSKRPLIEPRIRSLGLL------WRN 181

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R  +   V+ +G+K+  L  HL    + +                   L+D         
Sbjct: 182 RLTISA-VDFDGRKVNFLTAHLTKPYYDEFYGL--------------ELEDLAAIAPSLP 226

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262
            P V+AGDFN  I   G  +                   +            IPID+   
Sbjct: 227 GPLVLAGDFNSSILTPGVQNLLRTE-------GFGTVSLEPATWPIAASVFGIPIDHIFA 279

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                   ++                    S+H  +  ++
Sbjct: 280 RAPLRLKSVRRIA-------------DSFGSNHFGLMAEF 306


>gi|3746502|gb|AAD02930.1| reverse transcriptase [Oryzias latipes]
          Length = 1258

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 87/293 (29%), Gaps = 74/293 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+L++ NIN L          N VKR            K   A+IVFLQE     A    
Sbjct: 6   VKLLTLNINGL---------HNPVKRW-----KTLSKLKQDKAEIVFLQETHLPEAEHLK 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K  +   + +      S R        A AV  ++V               +     R
Sbjct: 52  LNKMGFKHVFYSSH---SSGRRRGGATLIAGAVNYQHVS-------------EYKDKEGR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +  +IN   I +L++++                        + + + I+ K +   
Sbjct: 96  YIM-ITGKINSILITLLNVYVPPGSD---------------WSFYRHIFEIISTKSQGT- 138

Query: 204 PFVIAGDFNRKI-----------NYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCNANK 249
             +  GDFN  +           +Y          ++    +  + +   +     + + 
Sbjct: 139 -LICGGDFNIVLNNSLDSSNGKGDYRKIGKKMRHLMEEMGIVDVWRENNPTKREYTHYSH 197

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +DY  M +N    +                     +SDH P+++  
Sbjct: 198 PHNAYSRLDYIFMFKNDLLRVKNSDIGIC------------AISDHNPVTVSL 238


>gi|301628749|ref|XP_002943509.1| PREDICTED: deoxyribonuclease-1-like 1-like, partial [Xenopus
           (Silurana) tropicalis]
          Length = 218

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 50/186 (26%), Gaps = 10/186 (5%)

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           + Q Y       +      R    +   + GK +  L +        ++     +     
Sbjct: 6   ITQQYKYADDDSAAPDVFAREPYIVRFNLFGKGLRDLVLVPMHTVPENASREIDALYDVF 65

Query: 184 L----SQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFP 238
           L       A+ +++    +    +  +  GDFN   +Y         +            
Sbjct: 66  LDITGRWDAEVVQEPTRNESILDLNILFLGDFNAACSYLSKKKKRTLRLYRDERFHWLID 125

Query: 239 KEKDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              D+    + +       D  V   +     +               + +   +SDH P
Sbjct: 126 DTTDTTVRDSTSCAY----DRIVAYGKELMANVQAVGIYNFTKALGLSEIQALEVSDHYP 181

Query: 298 ISIDYD 303
           + +D +
Sbjct: 182 VELDLN 187


>gi|303324261|ref|XP_003072118.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240111828|gb|EER29973.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 343

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 83/296 (28%), Gaps = 23/296 (7%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQ 72
              ++    + LV+WNIN             +        + +  + +++    D++FLQ
Sbjct: 59  SNQSAQDIPLALVTWNIN------------GTDLAPDIRTSAIITHIRDMRPVMDVIFLQ 106

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+        +        +YS+E         S + +      R   ++   +   L  
Sbjct: 107 EVTRTTLSVLLAMPWVREQWYSSEADATSWGHQSISTMMLLSKSRFHGLKRTPERAALGA 166

Query: 133 AKD-SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                F     R A+   + +           +        L N +  S ++        
Sbjct: 167 VWRVPFPSHFGRDALCCDIFLPICNPSECKKSVPGSHARIRLVNVHLDSLAIQPSYRPRQ 226

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--NK 249
              I     +    ++AGDFN  +     +D      +  D                  K
Sbjct: 227 LSIIASYLRATGRGLVAGDFNPVL---PEDDSIINENNLVDMWTELHPNDPGFTWGIDGK 283

Query: 250 NLRNKIPIDYF--VMDQNAYKFLIQESFSEILYNEDDIKSR-GKRLSDHCPISIDY 302
                  +D    +  +     +I        Y  ++       + SDHC +   +
Sbjct: 284 QAYPANRLDKVAKLGLKTHEIEVIPPGTCTYAYAAENRPEEREHKWSDHCGLKCSF 339


>gi|118150544|ref|NP_001071232.1| inositol polyphosphate 5-phosphatase OCRL-1 [Danio rerio]
 gi|117558415|gb|AAI25827.1| Zgc:152864 [Danio rerio]
          Length = 952

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 78/316 (24%), Gaps = 67/316 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYNAVAKV 83
           + +WN+N  S    +  W +S                    D+  +  QE+         
Sbjct: 305 VGTWNVNGQSPDSSLGPWLSSDPDP---------------PDVYALGFQELDLSTEAFFY 349

Query: 84  FPKNTWCIFYSTERLINHS---KRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDS 136
              +   ++        H                   + ++K++   +++          
Sbjct: 350 MDSSKEQLWVDAVERGLHQKARYIQVRIIRLVGMMLVVYIKKEHKDQIREIASESVGTGL 409

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
            ++ GN+  V +    +      ++ HL +        N               L ++  
Sbjct: 410 MNKMGNKGGVAVRFVFHNTSFCFVNSHLAAHVDDFERRNQDYKDICARMSF--HLLEYPP 467

Query: 197 QKKESLVPFVIAGDFNRK---INYLGNNDDF----WKTIDPNDSLIR-------FPKEKD 242
                    +  GD N +    +             + +   D L         F    +
Sbjct: 468 VSIVKHDVVIWLGDLNYRLCLPDAGEVKRLIAEKELRRLQEYDQLNLQRKTKRVFTDFME 527

Query: 243 SRCNANKNLRNKI-----------PI----DYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
              N     +               I    D  +   +  K L   S  E+         
Sbjct: 528 GEINFIPTYKYDAKSDRWDSSGKCRIPAWCDRILWRGSNVKQLHYRSHMEL--------- 578

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+S  + 
Sbjct: 579 ---KTSDHKPVSSVFS 591


>gi|189531100|ref|XP_692000.3| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase-like,
           partial [Danio rerio]
          Length = 677

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 80/310 (25%), Gaps = 61/310 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           L ++N+N  + +E +S W             L   A   D  ++  QE+           
Sbjct: 152 LGTYNVNGQTPKESLSPW-------------LASTASPPDFYLIGFQELDLSKEAFLFND 198

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFS 138
              +  W +        +             I     V+ ++   + +            
Sbjct: 199 TPKEPEWMLAVYKGLHPDAKYALVKLVRLVGIMLLFYVKAEHAPHISEVEAETVGTGVMG 258

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R GN+ AV +  + +   I V++ HL +        N          Q  Q         
Sbjct: 259 RMGNKGAVSIRFQFHNSDICVVNSHLAAHTEEFERRNQDFKDICRRIQFRQEDPTLPPLT 318

Query: 199 KESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEK 241
                  +  GD N +I+ L                    D   + +D     + F + +
Sbjct: 319 ILKHNIVLWLGDLNYRISDLEVDHVKDLISKKDFETLHTYDQLKRQMDEEVVFVGFTEGE 378

Query: 242 DSRCNANKNLRN------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                  K                    D  +           +S  ++ Y         
Sbjct: 379 IDFQPTYKYDTGSDQWDTSEKCRVPAWCDRILWRG--------KSIKQLHYQSHMTLKT- 429

Query: 290 KRLSDHCPIS 299
              SDH P+S
Sbjct: 430 ---SDHKPVS 436


>gi|9945302|gb|AAB95412.2| inositol polyphosphate 5-phosphatase II [Mus musculus]
 gi|117616438|gb|ABK42237.1| In(5)-phos type II [synthetic construct]
          Length = 776

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 83/316 (26%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +                  L  D+  V  QE+         
Sbjct: 132 VGTYNVNGQSPKECLRPWLSHS---------------ALAPDVYCVGFQELDLSKEAFFF 176

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 177 HDTPKEEEWFKAVSESLHPDAKYAKVKFVRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 236

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q  Q       
Sbjct: 237 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFPQVDPSQPP 296

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N +I  L                   +D     +        F +
Sbjct: 297 LTINKHDVILWLGDLNYRIEELDVGKVKKLVEEKAFQTLYAHDQLKIQVAARTIFDGFTE 356

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + +     K              R     D  +           ++ +++ Y       
Sbjct: 357 GEITFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH---- 404

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+S  +D
Sbjct: 405 MALKTSDHKPVSSVFD 420


>gi|221119120|ref|XP_002156178.1| PREDICTED: similar to Deoxyribonuclease gamma isoform 1 [Hydra
           magnipapillata]
          Length = 98

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 8/99 (8%)

Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN-A 266
            GDFN    Y+         +  +       + +D+  + +        +D  ++  N  
Sbjct: 1   MGDFNAGPKYISKKKLDQTELRTDKKFNWLLQNEDTTVSKSH-----ATLDRIIITGNAI 55

Query: 267 YKFLIQESFSEILYNEDD--IKSRGKRLSDHCPISIDYD 303
            + LI++S     ++E+         ++SDH P+  +  
Sbjct: 56  TQALIKDSAGTFNFDEEYKLTLEDALKISDHYPVKFEIS 94


>gi|26334428|dbj|BAB23505.2| unnamed protein product [Mus musculus]
          Length = 757

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 83/316 (26%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +                  L  D+  V  QE+         
Sbjct: 113 VGTYNVNGQSPKECLRPWLSHS---------------ALAPDVYCVGFQELDLSKEAFFF 157

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 158 HDTPKEEEWFKAVSESLHPDAKYAKVKFVRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 217

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q  Q       
Sbjct: 218 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFPQVDPSQPP 277

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N +I  L                   +D     +        F +
Sbjct: 278 LTINKHDVILWLGDLNYRIEELDVGKVKKLVEEKAFQTLYAHDQLKIQVAARTIFDGFTE 337

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + +     K              R     D  +           ++ +++ Y       
Sbjct: 338 GEITFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH---- 385

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+S  +D
Sbjct: 386 MALKTSDHKPVSSVFD 401


>gi|322789791|gb|EFZ14955.1| hypothetical protein SINV_13026 [Solenopsis invicta]
          Length = 295

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 38/108 (35%), Gaps = 4/108 (3%)

Query: 16  CTASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            + +VA    ++ +N+  +  + ++      +           +    ++  ADI+ LQE
Sbjct: 9   VSLTVAGIFTVMCYNVLCDKYATRQMYGYCPSWALDWEYRKKGILDEIRHYAADIISLQE 68

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKK 119
           + +        P+     +       + +K   +++       A+  +
Sbjct: 69  VETDQFYNFFLPELKHDGYDGIFSPKSRAKTMAENDRKYVDGCAIFYR 116


>gi|207341157|gb|EDZ69287.1| YOR109Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259149592|emb|CAY86396.1| Inp53p [Saccharomyces cerevisiae EC1118]
          Length = 1107

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 88/320 (27%), Gaps = 60/320 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQE 73
            T++    + + S+N+N  +++  +S W   +              +    DIV   LQE
Sbjct: 560 FTSTSNINLLIGSFNVNGATKKVDLSKWLFPIG-------------EKFKPDIVVLGLQE 606

Query: 74  MGSYNAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           +   +A + +    +   F+           +      + +    +     V+    + +
Sbjct: 607 VIELSAGSILNADYSKSSFWENLVGDCLNQYDDKYLLLRVEQMTSLLILFFVKADKAKYV 666

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +Q             AGN+ AV +  E        ++ HL +         +   S    
Sbjct: 667 KQVEGATKKTGFRGMAGNKGAVSIRFEYGATSFCFVNSHLAAGATNVEERRSDYESIVRG 726

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------------DDFW 225
               +       +           GD N +IN    +                   D   
Sbjct: 727 ITFTRT------KMIPHHDSIFWLGDMNYRINLPNEDVRRELLNQEEGYIDKLLHFDQLT 780

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             I+       F +         K        D      ++ K         I+Y  +++
Sbjct: 781 LGINSGSVFEGFKEPTLKFRPTYKYDPGTGTYD------SSEKERTPSWTDRIIYKGENL 834

Query: 286 KSRGK-----RLSDHCPISI 300
                      +SDH P+  
Sbjct: 835 LPLSYSDAPIMISDHRPVYA 854


>gi|307206307|gb|EFN84364.1| CCR4-NOT transcription complex subunit 6-like-B [Harpegnathos
           saltator]
          Length = 458

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 44/181 (24%), Gaps = 37/181 (20%)

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-------TQKKESLVPFVIAGDFN 212
           + +      +     +       +LS + + + D          +   S V  ++ GDFN
Sbjct: 263 ILVCTAHIHWDPEYCDVKLIQTMMLSNELRSILDQAGQSFRPGHKPDSSNVQLLLCGDFN 322

Query: 213 RKINYLGN-------------------NDDFWKTIDPNDSLIRFPKEKDSRC-------- 245
              +                            + I   D    F                
Sbjct: 323 SLPDSGVIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMP 382

Query: 246 NANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             N     K  IDY    + +      L   S      ++          SDH P+ ++ 
Sbjct: 383 YTNYTFEFKGIIDYIFYSKQSMVPLGLLGPLSQEWFREHKVVGCPHPHVPSDHFPLLVEL 442

Query: 303 D 303
           +
Sbjct: 443 E 443


>gi|293356404|ref|XP_344989.4| PREDICTED: nocturnin-like [Rattus norvegicus]
          Length = 208

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 25/104 (24%), Gaps = 5/104 (4%)

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-----RNKIPIDYF 260
            I   FN       +      +I+ N        +  S               +  +DY 
Sbjct: 97  FICRAFNADXEEEVHKHFASSSINLNSVYKLLSPDGQSEPPYTTWKIRTSGEYRHTLDYI 156

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              ++A                 +        SDH  +  D+ F
Sbjct: 157 WYSRHALSVTSALDLLTEEQIGPNRLPSFHYPSDHLSLVCDFSF 200


>gi|291009864|ref|ZP_06567837.1| endonuclease/exonuclease/phosphatase family protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 305

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 81/306 (26%), Gaps = 55/306 (17%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
            ++ + +L+   G +   + V +T +       + ++  AD+  +QE     A  ++  +
Sbjct: 27  ATFGVVSLNAWHGGTQVDDGVAKTEA-------FVRSSGADVFGMQETEGTLA-DELAGR 78

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
             W  + +                   +A+  +   V +    +          G R+AV
Sbjct: 79  LGWHSYQTG-----------------DVALLSRYPIVERFQSRVGVGARLQLDDG-RQAV 120

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDS-LENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
              V +N       D                 S     + +  + +   I Q +    P 
Sbjct: 121 VWTVHLNYTPYGPYDACFDHMTPQQILDREESSGRVDEIRETLEKMAPQIEQARAGGAPV 180

Query: 206 VIAGDFNRKINYLGN---------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
            + GDFN   +                 W T             +++  +      N   
Sbjct: 181 FLTGDFNAPSHLDWTGAAQDSHCGYTVQWPTSVAVAEAGLADSFREANADPVATPGNTWS 240

Query: 256 -----------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
                             ID+     +A                 D  +  +  +DH  +
Sbjct: 241 PVYPKHDGSTGADEPQDRIDFVHHAGSARTVSSTAEVRGEPAPVPD-HAGNEWPTDHAAV 299

Query: 299 SIDYDF 304
              + +
Sbjct: 300 VSFFSW 305


>gi|257458602|ref|ZP_05623737.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           vincentii ATCC 35580]
 gi|257444036|gb|EEV19144.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           vincentii ATCC 35580]
          Length = 260

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 77/296 (26%), Gaps = 56/296 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81
           +++ +WN                   T      L Q     +ADI  +QE    +   + 
Sbjct: 1   MKICTWNCRY--------------GLTFEKAAYLCQ--AGYNADIYAIQEYDMRNNKPIH 44

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGAKDSFSRA 140
           ++            +        +S  D+  A+     +  R+   + P           
Sbjct: 45  EIEKHLGQLQDKYGDGREYKDNAESGGDLGLALFSNTYRIERIYSNTIPYRYV------- 97

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                 ++  +   +   ++ +  K    +  LE        +    A     +      
Sbjct: 98  ---VPYKVTCKETNESFTLIHVWTK----IADLEANQKQDYIMQVIGALENPTYNKLLIP 150

Query: 201 SLVPFVIAGDFNRKINYLGNNDD-----FWKTIDPNDSLIRFPKEK-------DSRCNAN 248
                +  GDFN  +      D      F +T+     +  +   +       D      
Sbjct: 151 EDNKALWIGDFNSSMQLKNEIDKNNHTRFLETMKKYGLVSAYHTNRQKKYGKEDQFTFIG 210

Query: 249 KNLRNKIPI--DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +     DY       +     ++ +   +N           SDHCP+  + 
Sbjct: 211 TYRNGQQRFFNDYIFY---HHDRFKCKTVTIGRFNTFSFF------SDHCPVLAEL 257


>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
          Length = 1200

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 56/197 (28%), Gaps = 19/197 (9%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA-KNLDADIVFLQEMGSYNAV 80
            ++ + S+N+                 ++     L++        AD+V LQE+  +   
Sbjct: 246 DRLVVASYNV---------LAEFEWPPQSHRHAPLVQNLLSAQAAADVVVLQEVTDHFLP 296

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             +  +     +          K          I V  K        + L   +      
Sbjct: 297 DLLGSEELRGRYPYVSHGPPDIKGAEPLPSLLNIVVLSKFPFEW---HHLPFQRKHKGCT 353

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R +     +    +     +         +       + +    + Q + D++ +   
Sbjct: 354 VVRFSTIGTSDAPDGQFNPWILVACHLSQGLTDG-----AIATKKNEIQKMLDYLLRTFP 408

Query: 201 SLVPFVIAGDFNRKINY 217
              P+++AGDFN   + 
Sbjct: 409 QN-PWILAGDFNIVTSS 424


>gi|190407438|gb|EDV10705.1| inositol polyphosphate 5-phosphatase [Saccharomyces cerevisiae
           RM11-1a]
          Length = 1107

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 88/320 (27%), Gaps = 60/320 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQE 73
            T++    + + S+N+N  +++  +S W   +              +    DIV   LQE
Sbjct: 560 FTSTSNINLLIGSFNVNGATKKVDLSKWLFPIG-------------EKFKPDIVVLGLQE 606

Query: 74  MGSYNAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           +   +A + +    +   F+           +      + +    +     V+    + +
Sbjct: 607 VIELSAGSILNADYSKSSFWENLVGDCLNQYDDKYLLLRVEQMTSLLILFFVKADKAKYV 666

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +Q             AGN+ AV +  E        ++ HL +         +   S    
Sbjct: 667 KQVEGATKKTGFRGMAGNKGAVSIRFEYGATSFCFVNSHLAAGATNVEERRSDYESIVRG 726

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------------DDFW 225
               +       +           GD N +IN    +                   D   
Sbjct: 727 ITFTRT------KMIPHHDSIFWLGDMNYRINLPNEDVRRELLNQEEGYIDKLLHFDQLT 780

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             I+       F +         K        D      ++ K         I+Y  +++
Sbjct: 781 LGINSGSVFEGFKEPTLKFRPTYKYDPGTGTYD------SSEKERTPSWTDRIIYKGENL 834

Query: 286 KSRGK-----RLSDHCPISI 300
                      +SDH P+  
Sbjct: 835 LPLSYSDAPIMISDHRPVYA 854


>gi|151945731|gb|EDN63972.1| inositol polyphosphate 5-phosphatase [Saccharomyces cerevisiae
           YJM789]
          Length = 1107

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 88/320 (27%), Gaps = 60/320 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQE 73
            T++    + + S+N+N  +++  +S W   +              +    DIV   LQE
Sbjct: 560 FTSTSNINLLIGSFNVNGATKKVDLSKWLFPIG-------------EKFKPDIVVLGLQE 606

Query: 74  MGSYNAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           +   +A + +    +   F+           +      + +    +     V+    + +
Sbjct: 607 VIELSAGSILNADYSKSSFWENLVGDCLNQYDDKYLLLRVEQMTSLLILFFVKADKAKYV 666

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +Q             AGN+ AV +  E        ++ HL +         +   S    
Sbjct: 667 KQVEGATKKTGFRGMAGNKGAVSIRFEYGATSFCFVNSHLAAGATNVEERRSDYESIVRG 726

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------------DDFW 225
               +       +           GD N +IN    +                   D   
Sbjct: 727 ITFTRT------KMIPHHDSIFWLGDMNYRINLPNEDVRRELLNQEEGYIDKLLHFDQLT 780

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             I+       F +         K        D      ++ K         I+Y  +++
Sbjct: 781 LGINSGSVFEGFKEPTLKFRPTYKYDPGTGTYD------SSEKERTPSWTDRIIYKGENL 834

Query: 286 KSRGK-----RLSDHCPISI 300
                      +SDH P+  
Sbjct: 835 LPLSYSDAPIMISDHRPVYA 854


>gi|26332399|dbj|BAC25089.1| unnamed protein product [Mus musculus]
          Length = 742

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 83/316 (26%), Gaps = 65/316 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +                  L  D+  V  QE+         
Sbjct: 98  VGTYNVNGQSPKECLRPWLSHS---------------ALAPDVYCVGFQELDLSKEAFFF 142

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 143 HDTPKEEEWFKAVSESLHPDAKYAKVKFVRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 202

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q  Q       
Sbjct: 203 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFPQVDPSQPP 262

Query: 197 QKKESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPK 239
                    +  GD N +I  L                   +D     +        F +
Sbjct: 263 LTINKHDVILWLGDLNYRIEELDVGKVKKLVEEKAFQTLYAHDQLKIQVAARTIFDGFTE 322

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            + +     K              R     D  +           ++ +++ Y       
Sbjct: 323 GEITFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH---- 370

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+S  +D
Sbjct: 371 MALKTSDHKPVSSVFD 386


>gi|294944081|ref|XP_002784077.1| protein angel, putative [Perkinsus marinus ATCC 50983]
 gi|239897111|gb|EER15873.1| protein angel, putative [Perkinsus marinus ATCC 50983]
          Length = 293

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 65/240 (27%), Gaps = 31/240 (12%)

Query: 14  VPCTASVAQKVRLVSWNI------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
                  +     ++WN+        L      +  K      ++    L  +   L+AD
Sbjct: 3   TTTIPPSSSVFSFLTWNVLHTAHYQRLLADPTFNNPKRRALAPSARQVNLTNHLLRLNAD 62

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           +V LQE+             +   +     +IN + +  +       A R + +   +  
Sbjct: 63  VVALQELDVNTLPTVKATLESKGGYRMVSAMINETVQAKDGCAIFCKADRFEPLVTTEFR 122

Query: 128 YP----------------LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
                             L GA    +R      V  L+        ++      F    
Sbjct: 123 MCHALDKYLHSLTQCQSGLGGALYRETREKLNLCVAALLRDRLTGCDLVAATTHLFWSPK 182

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESL-----VPFVIAGDFNRKINYLGNNDDFWK 226
             +     +  L     + L+D+I+              ++ GDFN         +   K
Sbjct: 183 FPDIKLLQAYLLS----RQLEDFISDNTPGDPFVSPPAVILGGDFNSTPPNSAVYELLTK 238


>gi|239834620|ref|ZP_04682948.1| outer membrane autotransporter barrel domain-containing protein
           [Ochrobactrum intermedium LMG 3301]
 gi|239822683|gb|EEQ94252.1| outer membrane autotransporter barrel domain-containing protein
           [Ochrobactrum intermedium LMG 3301]
          Length = 1199

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 58/225 (25%), Gaps = 51/225 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +  +R+++ NI                 +   +  L   +    + D++ +QE+     V
Sbjct: 38  SYDIRVMTLNIWN---------------KFKQNPELTADFMAAANFDVLGMQEVNGSTYV 82

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            ++                      +       I  R              G  +     
Sbjct: 83  TRIPDFLQ---------TAGRGTYGNVQVGDVGIISRLPGKF---------GTINLGGNT 124

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R      ++  G +   L   +       S         +    +A+ L  W      
Sbjct: 125 QGRYVSYTQLDAQGSRPQTLVGTVHLDYADGS---------TGRVNEAKALNTWAKGAI- 174

Query: 201 SLVPFVIAGDFN------RKINYLGNNDDFWKTIDPNDSLIRFPK 239
              P ++ GDFN      R ++++       +  D N       +
Sbjct: 175 --QPIMVMGDFNAGDVSERGLHHIDAQIRLMQQSDGNTFYRDLTR 217



 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY- 280
            + +K  D ND    +P   +   N   +   +  ID+F++ +   K+          Y 
Sbjct: 296 REDFKPHDLNDGSTTWPSAGEDATNTWASWD-RAKIDHFLVSRPFGKWYEIVDDPNDPYT 354

Query: 281 ------NEDDIKSRGKRLSDHCPISIDYDF 304
                        + + +SDH P++ D+ +
Sbjct: 355 GVIKDVKVTRPGRQPEAISDHEPVAHDFRW 384


>gi|255713656|ref|XP_002553110.1| KLTH0D09174p [Lachancea thermotolerans]
 gi|238934490|emb|CAR22672.1| KLTH0D09174p [Lachancea thermotolerans]
          Length = 1117

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/310 (12%), Positives = 84/310 (27%), Gaps = 60/310 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL--QEMGSYNAVAKV 83
           + ++N+N L+ +  +S W   +                   D+V L  QE+   +A + +
Sbjct: 573 VGTYNVNGLTRRVDISKWLFPIG-------------DKFKPDVVVLGMQEIIELSAGSIL 619

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTA---------IAVRKKNVRVLQQSYPLLGAK 134
               +   F+        ++ +    +  A           V+   +  ++Q        
Sbjct: 620 NADYSKSPFWQNIVNECLNQYNDKYLLLRAEQMSSLLILFFVKSDKINNVKQVEGSSKKT 679

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                 GN+ AV +  +        ++ HL +             S +      +     
Sbjct: 680 GLGGMTGNKGAVSIRFDYGSTSFCFVNAHLAAGVSNVDERRHDYESITKGICFTR----- 734

Query: 195 ITQKKESLVPFVIAGDFNRK-------------------INYLGNNDDFWKTIDPNDSLI 235
            +++          GD N +                      L  +D   + I+      
Sbjct: 735 -SRQISHHDAIFWLGDLNYRLSLPNEEVRREISDQKDNFPESLLMHDQLTQEINAGVVFK 793

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----- 290
            F +         K        D       + K         I+Y  ++++         
Sbjct: 794 DFKEPTVKFPPTYKYDHGTNNYD------TSEKARTPSWTDRIVYKGNNLRPLAYSDSQL 847

Query: 291 RLSDHCPISI 300
             SDH P+  
Sbjct: 848 IASDHKPVYA 857


>gi|50955059|ref|YP_062347.1| membrane protein [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50951541|gb|AAT89242.1| membrane protein [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 305

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 69/295 (23%), Gaps = 72/295 (24%)

Query: 8   ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
           A     +P     A +  +VS NI   +                   + + +   +   D
Sbjct: 82  AFGVAALPAMNGGAPRFTVVSENIRAQNP----------------QASAIAEGLASRSPD 125

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ LQE+ +                 S                             L   
Sbjct: 126 LITLQELDATTR----------PAVESALAGRYPHHIVVGTVG-------------LWSR 162

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y L G +      G  RA+ + V   G    V  +HL S    +              + 
Sbjct: 163 YELTGEEPLSLGLGWNRALRVDVATPGATTRVYTVHLASMRPGEH---------QERDRM 213

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L++ I    ++    ++ GDFN               +D                  
Sbjct: 214 LAELRNTIA--ADTAEHLLVIGDFNAASTDHSL-SPLLAELDEQPDSSLGLGFSWPAVFP 270

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    +D+ +                +  +   +       SDH  I +  
Sbjct: 271 ------VARLDHALTRG-------------LTVSVSTVLPAN--GSDHRGILVGL 304


>gi|281349439|gb|EFB25023.1| hypothetical protein PANDA_005392 [Ailuropoda melanoleuca]
          Length = 365

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 65/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S N+N L+                     +  + K  D  I  LQE       A  
Sbjct: 9   LSIISINLNGLNSP--------------IKRHRVADWIKRHDPSICCLQETHFEPKDAFR 54

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +        +             +                           
Sbjct: 55  LRVRGWSTIFHANGPQKKAGVAILISDRLDFKLE-------------------------- 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 89  ---AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 140

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 141 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 199

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 200 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 239


>gi|119026237|ref|YP_910082.1| hypothetical protein BAD_1219 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118765821|dbj|BAF40000.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 382

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 76/288 (26%), Gaps = 65/288 (22%)

Query: 15  PCTASVAQKV-------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
              A+  + V       RL++ N+                 +  +D   +    ++   +
Sbjct: 143 AVAAASGETVNTDDGYARLMTCNVY----------------KGRADAREIVDLVRSEHVE 186

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ LQE     A      +     +    ++ +       N + +A  +   +   +  S
Sbjct: 187 VLALQETTD--AFVDDLNRAGIASYLPYAQVSSSDGVY-GNGLWSASPLDDPSDDDVDSS 243

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
              +                  V  NG    V  + + +    +     +  S       
Sbjct: 244 ASFMPGG--------------TVSFNGGATQVRFVSVHTTSPTNDYWQQWKRS------- 282

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L +    + ++   +V  GDFN   ++    +                 +     N 
Sbjct: 283 ---LDELAKLRFDTSRRYVFMGDFNATYDHTPFRNILGNRFSDASRQAGEGLKFSWPANV 339

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +        ID+ V+D       ++    +               SDH
Sbjct: 340 DYVPSFAG-IDHIVLDSGMQAGQVRTVKVD--------------GSDH 372


>gi|6324683|ref|NP_014752.1| Inp53p [Saccharomyces cerevisiae S288c]
 gi|74645040|sp|Q12271|INP53_YEAST RecName: Full=Inositol-1,4,5-trisphosphate 5-phosphatase 3;
           AltName: Full=Suppressor of PMA1 protein 2; AltName:
           Full=Synaptojanin-like protein 3
 gi|1164954|emb|CAA64029.1| YOR3231w [Saccharomyces cerevisiae]
 gi|1420295|emb|CAA99307.1| PIE2 [Saccharomyces cerevisiae]
 gi|285814991|tpg|DAA10884.1| TPA: Inp53p [Saccharomyces cerevisiae S288c]
          Length = 1107

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 88/320 (27%), Gaps = 60/320 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQE 73
            T++    + + S+N+N  +++  +S W   +              +    DIV   LQE
Sbjct: 560 FTSTSNINLLIGSFNVNGATKKVDLSKWLFPIG-------------EKFKPDIVVLGLQE 606

Query: 74  MGSYNAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           +   +A + +    +   F+           +      + +    +     V+    + +
Sbjct: 607 VIELSAGSILNADYSKSSFWENLVGDCLNQYDDKYLLLRVEQMTSLLILFFVKADKAKYV 666

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +Q             AGN+ AV +  E        ++ HL +         +   S    
Sbjct: 667 KQVEGATKKTGFRGMAGNKGAVSIRFEYGATSFCFVNSHLAAGATNVEERRSDYESIVRG 726

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------------DDFW 225
               +       +           GD N +IN    +                   D   
Sbjct: 727 ITFTRT------KMIPHHDSIFWLGDMNYRINLPNEDVRRELLNQEEGYIDKLLHFDQLT 780

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             I+       F +         K        D      ++ K         I+Y  +++
Sbjct: 781 LGINSGSVFEGFKEPTLKFRPTYKYDPGTGTYD------SSEKERTPSWTDRIIYKGENL 834

Query: 286 KSRGK-----RLSDHCPISI 300
                      +SDH P+  
Sbjct: 835 LPLSYSDAPIMISDHRPVYA 854


>gi|34392566|dbj|BAC82613.1| pol-like protein [Danio rerio]
          Length = 1284

 Score = 49.2 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 94/296 (31%), Gaps = 65/296 (21%)

Query: 26  LVSW-NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
            +S+ N+       G+  +          +  +++  K    D++ LQE        +  
Sbjct: 8   FMSFMNVFIFFMVLGIVSFNARGLLDIRKFEKVKEMCKRE--DVILLQETN----WREEC 61

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
            K     +       N   R        AI +++ +  + +  Y     K          
Sbjct: 62  MKEIRKRWSGEMLYNNGDGR---LGRGVAILLKENSGVLCKTIYNDKEGK---------- 108

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            +   +E   KK+ ++++H                  +   +    L+D++ + +     
Sbjct: 109 CMICEMEYVKKKVIMVNVHAP-------------TEENKKKEYYNVLRDYLKKHER---- 151

Query: 205 FVIAGDFNRKINYLGNNDDF----------WKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
            +I GDFN   + L   +             K +    +LI   +E++ +       +  
Sbjct: 152 VIIMGDFNTVFSKLEMAEGMVFKTDKGRKELKILMEEMNLIDVWRERNEQTKEYSRRQIV 211

Query: 255 I------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                   ID+ +  +N   F+ +  + E              LSDH P+ +  D+
Sbjct: 212 GNFCCQTRIDFILCTRNVEGFINKIKYEETS------------LSDHKPLFMKLDW 255


>gi|307189213|gb|EFN73661.1| CCR4-NOT transcription complex subunit 6-like-B [Camponotus
           floridanus]
          Length = 462

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 44/181 (24%), Gaps = 37/181 (20%)

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-------TQKKESLVPFVIAGDFN 212
           + +      +     +       +LS + + + D          +   S V  ++ GDFN
Sbjct: 267 ILVCTAHIHWDPEFCDVKLIQTMMLSNELRSILDQAGQSFRPGHKPDSSNVQLLLCGDFN 326

Query: 213 RKINYLGN-------------------NDDFWKTIDPNDSLIRFPKEKDSRC-------- 245
              +                            + I   D    F                
Sbjct: 327 SLPDSGVIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMP 386

Query: 246 NANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             N     K  IDY    + +      L   S      ++          SDH P+ ++ 
Sbjct: 387 YTNYTFEFKGIIDYIFYSKQSMVPLGLLGPLSPEWFKEHKVVGCPHPHVPSDHFPLLVEL 446

Query: 303 D 303
           +
Sbjct: 447 E 447


>gi|294949245|ref|XP_002786115.1| Apurinic endonuclease-redox protein, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900243|gb|EER17911.1| Apurinic endonuclease-redox protein, putative [Perkinsus marinus
           ATCC 50983]
          Length = 372

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 68/310 (21%), Gaps = 64/310 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79
           +    V+WN+ +L                      L    K    D++   E+   + + 
Sbjct: 87  EDFTAVAWNVGSLRSLLN------------HKVKELTDLCKKEQPDVLGFMEIKLSNEDM 134

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
             +        +      +       +    ++  A     VR     +      D    
Sbjct: 135 CEECDNLLREAVEDILGPVEIVWNHCTAKKGYSGTAF---VVRKSAGKFDSKLGIDGHED 191

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
              R      + +    + V+  ++ +     +    +  S                   
Sbjct: 192 PEGR-----TIALEFDDMVVVLCYVPNSGQDLNR-LAHRTSGKECFD-----AKLAKYCG 240

Query: 200 ESLVPFVIAGDFN------------------RKINYLGNNDDFWKTIDPNDSLIRFPKEK 241
               P ++ GD N                           + F +          F    
Sbjct: 241 SFDKPTLLLGDMNVADRDVDIWNVDKPHIPKSAGTTNEERESFREHYTSKGFTDTFVNMH 300

Query: 242 DSRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                       +           +DY +         I+++F    +            
Sbjct: 301 PEATGCFSYWSVRARNKPKNRGLRLDYVITAPGFPMDKIKDAFILEDFAPHG-------- 352

Query: 293 SDHCPISIDY 302
            DHCP+ I +
Sbjct: 353 -DHCPVGITF 361


>gi|307132184|ref|YP_003884200.1| hypothetical protein Dda3937_03970 [Dickeya dadantii 3937]
 gi|306529713|gb|ADM99643.1| conserved protein [Dickeya dadantii 3937]
          Length = 263

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 83/289 (28%), Gaps = 71/289 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
               ++R++ WNI        +S+ KN  + T                 ++ LQE  S  
Sbjct: 40  PTEDRLRVMVWNIFKQQRTNWLSVLKNFGENTQ----------------LMLLQEAQSSP 83

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + + F    +         +  S                  V  L  + P+        
Sbjct: 84  ELIR-FATTHYLSAEQVPAFVLPSHPSG--------------VMTLSSAQPMYCFPLRER 128

Query: 139 RAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R A   L+ +    +G+ + V++IH  +F                   Q + + + 
Sbjct: 129 EPLIRLAKSALITVYSLNDGRLLMVINIHAVNFSLGVEAYTK----------QLETIGEQ 178

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           + + K    P V+AGDFN            ++             +   R          
Sbjct: 179 LKRHKG---PVVMAGDFNAW--SQPRVSALYRFAHRMGLGEVVFSDDQRR------RAFG 227

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            P+D+    +     +   S                  SDH P+ +++D
Sbjct: 228 RPLDFVFYRE---LGVANSSVLVTN------------ASDHNPLLVEFD 261


>gi|256272989|gb|EEU07953.1| Inp53p [Saccharomyces cerevisiae JAY291]
          Length = 1107

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 88/320 (27%), Gaps = 60/320 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQE 73
            T++    + + S+N+N  +++  +S W   +              +    DIV   LQE
Sbjct: 560 FTSTSNINLLIGSFNVNGATKKVDLSKWLFPIG-------------EKFKPDIVVLGLQE 606

Query: 74  MGSYNAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           +   +A + +    +   F+           +      + +    +     V+    + +
Sbjct: 607 VIELSAGSILNADYSKSSFWENLVGDCLNQYDDKYLLLRVEQMTSLLILFFVKADKAKYV 666

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +Q             AGN+ AV +  E        ++ HL +         +   S    
Sbjct: 667 KQVEGATKKTGFRGMAGNKGAVSIRFEYGATSFCFVNSHLAAGATNVEERRSDYESIVRG 726

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------------DDFW 225
               +       +           GD N +IN    +                   D   
Sbjct: 727 ITFTRT------KMIPHHDSIFWLGDMNYRINLPNEDVRRELLNQEEGYIDKLLHFDQLT 780

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             I+       F +         K        D      ++ K         I+Y  +++
Sbjct: 781 LGINSGSVFEGFKEPTLKFRPTYKYDPGTGTYD------SSEKERTPSWTDRIIYKGENL 834

Query: 286 KSRGK-----RLSDHCPISI 300
                      +SDH P+  
Sbjct: 835 LPLSYSDAPIMISDHRPVYA 854


>gi|218442141|ref|YP_002380470.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
 gi|218174869|gb|ACK73602.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
          Length = 447

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 64/254 (25%), Gaps = 51/254 (20%)

Query: 95  TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE------- 147
           T    N S           + V  K   + +Q+                           
Sbjct: 168 TPEYANDSWGFGFYPGQYGMVVYSKYPILEEQARTFGNFLWQDMPDNLLPTDWYSPEVAA 227

Query: 148 -----------LLVEINGKKIWVLDIHLKSFCFLDSLENTY-SPSCSLLSQQAQWLK--- 192
                      L ++++G  I +L  H     F D  ++     +   +   A ++    
Sbjct: 228 QFPLSSKSHWDLPIDVDGTIIHILASHPTPPTFDDGQDDRNGRRNHDEIRLWADYITPGQ 287

Query: 193 -DWITQKKES------LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--------- 236
            D+I     +         FVI GD N   N   + D     +  N  +           
Sbjct: 288 GDYICDDLNNCGGLTPGSKFVIMGDQNADPNDGDSTDGAINQLLDNPLVNTSKTPSSLGG 347

Query: 237 --FPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +        N N N           + +DY +   N                E+   +
Sbjct: 348 KEYSLNGSGNPNQNGNPAYDTAVFVGGLRVDYVLPSDNLKIL----DAQVFWPTENSPLA 403

Query: 288 RGKRLSDHCPISID 301
                SDH  + +D
Sbjct: 404 SLNLASDHRAVYVD 417



 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 54/203 (26%), Gaps = 19/203 (9%)

Query: 6   VLALVFFLVPCTASVAQ--KVRLVSWN-----------INTLSEQEGVSLWKNSVKRTTS 52
           +  ++   +   A   +   VR+ ++N           I  LS      L+  +     +
Sbjct: 11  LFGVLALSLTFPAVAQEIPPVRIATFNTSLSPNLPNELIEALSITPDNPLYDTNPLTIQA 70

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
               + +  + +D DI+ L E                  F S  + I+ + R   N I+ 
Sbjct: 71  R--QVAEIIQRIDPDIILLNEFNYNPENPTGAAVLFQQNFLSVGQNISGNPRGPANPINF 128

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
                           P      S      R    +            +       +   
Sbjct: 129 NEFYVGPGKITD----PFNTGIFSGYDLNTRNGGAITSPPPIGTPEYANDSWGFGFYPGQ 184

Query: 173 LENTYSPSCSLLSQQAQWLKDWI 195
                     +L +QA+   +++
Sbjct: 185 YGMVVYSKYPILEEQARTFGNFL 207


>gi|147866881|emb|CAN78850.1| hypothetical protein VITISV_013214 [Vitis vinifera]
          Length = 1074

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  +     +           F +T+D  + +    + +    N   N +
Sbjct: 92  DDPWCLGGDFNITLFQQERSSQRRISSAMRRFAETVDDLELVDLPLQGEKFTWNGGLNNQ 151

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F++  +              ++        + +SDH PI ++
Sbjct: 152 AWARLDKFLVSPS----------WLDQFSGVIQSRLSRPISDHFPIVLE 190


>gi|3746499|gb|AAD02928.1| reverse transcriptase [Oryzias latipes]
          Length = 1258

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 83/293 (28%), Gaps = 74/293 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+L++ NIN L          N VKR            K   A+IVFLQE     A    
Sbjct: 6   VKLLTLNINGL---------HNPVKRW-----KTLSKLKQDKAEIVFLQETHLPEAEHLK 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             K  +   +       +S   S      A  +           Y              R
Sbjct: 52  LNKMGFKHVF-------YSSHSSGRRRGVATLIAGAVNYQHVSEYKD---------KEGR 95

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +  +IN   I +L++++                        + + + I+ K +   
Sbjct: 96  YIM-ITGKINSILITLLNVYVPPGSD---------------WSFYRHIFEIISTKSQGT- 138

Query: 204 PFVIAGDFNRKI-----------NYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCNANK 249
             +  GDFN  +           +Y          ++    +  + +   +     + + 
Sbjct: 139 -LICGGDFNIVLNNSLDSSNGKGDYRKIGKKMRHLMEEMGIVDVWRENNPTKREYTHYSH 197

Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +DY  M +N    +                     +SDH P+++  
Sbjct: 198 PHNAYSRLDYIFMFKNDLLRVKNSDIGIC------------AISDHNPVTVSL 238


>gi|12860016|dbj|BAB31837.1| unnamed protein product [Mus musculus]
          Length = 824

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 84/333 (25%), Gaps = 64/333 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNA 79
           + +WN+N   +     L    +     D   L       D    AD+  +  +EM   +A
Sbjct: 218 VGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDYQDDGSPADVFAIGFEEMVELSA 277

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLL 131
              V    T    +  +     S+      + +A        I VR  +V  ++      
Sbjct: 278 GNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDT 337

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
                  +AGN+ AV +  +++      +  HL +        N      +        L
Sbjct: 338 VKTGMGGKAGNKGAVGIRFQLHSTSFCFVCSHLTAGQSQVKERNEDYREITHK------L 391

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLI 235
                +   S       GDFN +I+              WK +                 
Sbjct: 392 SFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFK 451

Query: 236 RFPKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNE 282
            F +   +     K              R     D      +           + +  + 
Sbjct: 452 DFHEGAVNFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDL 511

Query: 283 D---------------DIKSRGKRLSDHCPISI 300
           D                      + SDH P+  
Sbjct: 512 DGDPQIRHTWSPGTLKYYGRAELQASDHRPVLA 544


>gi|317123357|ref|YP_004097469.1| endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
 gi|315587445|gb|ADU46742.1| Endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
          Length = 370

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/366 (11%), Positives = 86/366 (23%), Gaps = 90/366 (24%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80
            VR  ++N  +L+      L  +      +    + +  +    D++ + E         
Sbjct: 2   DVRFATFN-ASLNRNAAGQLVADLSTPDNAQARAVAEIIQRTSPDVLLINEFDFYEDGVA 60

Query: 81  AKVFPKNT------------WCIFYSTERL-----------------INHSKRDSNNDIH 111
           A++F  N             +  ++                       + +         
Sbjct: 61  AELFRDNYLEVSQNGADPADYPYYFVAPSNTGIPSGFDLNDNGVVGGPDDAYGFGFFPGQ 120

Query: 112 TAIAVRKKNVR----------VLQQSYPLLGAKDSFSRAGNRRAVE--------LLVEIN 153
             + V  K              L +  P       F     +  +         + + I 
Sbjct: 121 YGMVVYSKYPIDAGAVRTFQHFLWKDLPGNLMPTEFYSPEEQAVLRLSSKSHWDVPISIG 180

Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-----------ESL 202
              +  L  H     F    +     +   +   A ++                      
Sbjct: 181 KHTVHFLVSHPTPPTFDGPEDRNGRRNNDEIRFWADYVGSPARSAYVYDDAGATGGLRPG 240

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTI-------------------------DPNDSLIRF 237
             FVIAGD N   N   + +   + +                           N S    
Sbjct: 241 ELFVIAGDQNSDPNDGDSVEGSIEALLNHPRINTSVTPSSAGAVEASALQGGANLSHTGN 300

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295
           P    +  N N    N +  DY +  +     L    F  +  +     +       SDH
Sbjct: 301 PAYDTADFNDNPAPGN-LRADYVLPSRALRI-LDAAVFWPVQADPLSRLTGTFPFPSSDH 358

Query: 296 CPISID 301
             + +D
Sbjct: 359 RLVWVD 364


>gi|260596625|ref|YP_003209196.1| hypothetical protein CTU_08330 [Cronobacter turicensis z3032]
 gi|260215802|emb|CBA28247.1| UPF0294 protein Ent638_0743 [Cronobacter turicensis z3032]
          Length = 267

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 91/303 (30%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P  A +     +R++ WNI                ++     ++L+ + K  
Sbjct: 25  FASIGKALPAGAPLPGDGSLRVLVWNIF--------------KQQRAEWLSVLQNFGKE- 69

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            A +V LQE  +   + +    N         +   +  +     S         +R++ 
Sbjct: 70  -AHLVLLQEAQTTPELVRFATSNYLAADQVPAFVLPQHPSGVMTLSAAHPVYCCPLRERE 128

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             +      L               V +    +G+ + V++IH  +F     + +     
Sbjct: 129 PILRLSKSAL---------------VTVYPLPDGRLLMVVNIHAVNFSLGVDVYS----- 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 169 --------KQLGPIGDQIGHHSGPVIMAGDFNAW-SRPRMNALYRFAREMSLREVRFTDD 219

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                        +      R SDH P+ +
Sbjct: 220 QRRRAFGRP-------LDFVFYRG---------------LAVQEASVLVTRASDHNPLLV 257

Query: 301 DYD 303
           ++ 
Sbjct: 258 EFS 260


>gi|167392010|ref|XP_001739989.1| synaptojanin [Entamoeba dispar SAW760]
 gi|165896122|gb|EDR23629.1| synaptojanin, putative [Entamoeba dispar SAW760]
          Length = 779

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/323 (12%), Positives = 90/323 (27%), Gaps = 65/323 (20%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL--QEM 74
           ++A+++++   +WNIN           +  V + TS          +   DIV L  QE+
Sbjct: 142 AIAKELKIQICTWNIN------QGLYDQEIVDKWTS--------LLSEKPDIVALGVQEL 187

Query: 75  G-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             S +A+      +     +      + ++   N    +        V  +     +   
Sbjct: 188 DMSVDAIITGKKYSERAEQWKDVICKSINRNGGNEYDESGWYQLCGIVLFVFVHKHIKSQ 247

Query: 134 KDSFSRAGNR-RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              F  +  R  A+   +   G     + I+  + CF++S    +   C   ++  + + 
Sbjct: 248 IKMFGLSECRTGAMSGKLANKGGVAIGMKIYDSTICFVNSHLAAHQEFCERRNKDWEEIS 307

Query: 193 DWITQKKESLVP----------FVIAGDFNRKINYLGN---------------------- 220
               +   +  P           +  GD N +I+   +                      
Sbjct: 308 KMKIKYYNNTSPLFIPLLQHDVVIWMGDLNYRIDMEDSEVRKLVRERDLTTLYRNDQLFN 367

Query: 221 ---NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                  ++             +         + R     D  +        +I      
Sbjct: 368 SRMKKKVFQNFKEAKITFLPTFKIKIGNGEYVDNRVPSWCDRVLYKTERRHGVI------ 421

Query: 278 ILYNEDDIKSRGKRLSDHCPISI 300
                +   S     SDH P+S 
Sbjct: 422 ----VEKYTSFELYNSDHKPVSA 440


>gi|326664776|ref|XP_003197882.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1140

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 67/272 (24%), Gaps = 62/272 (22%)

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
              ++      +    K    D+  LQE         +     +  +             
Sbjct: 11  RSVKSLVRAQSIFSLLKTFKTDVFLLQEC-------ALHFLKNYKKWEDLWTPGPSIWSG 63

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           SN + +  +A+   N  +L +   ++             A+   + +  +   VL+ +  
Sbjct: 64  SNFNKNDGVAILINNPNILVKGSTVVRDGR---------AILANLTVLDRDFNVLNFY-- 112

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-- 223
                       +            L + I       VPF++AGDFN  +          
Sbjct: 113 -------GFTDKNKRF--------ELLEDIQPHMLGRVPFILAGDFNCVLTQKDRRRADD 157

Query: 224 ------------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                         +     D      + ++     + +      IDY            
Sbjct: 158 FKVDKTSVLLQGLVRDFKLVDCFKAMHQREEGFTWFSGDGTRASRIDYMFTRD------- 210

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   Y   D K      SDH  +S    
Sbjct: 211 --------YPPTDAKLTPLFFSDHLMLSCTLS 234


>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
 gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
          Length = 1440

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 90/320 (28%), Gaps = 68/320 (21%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIV--FLQEMGS--------- 76
           N N + +   + ++  +          L  +    +   DI+   LQE+ +         
Sbjct: 393 NQNNIVKNAHLKIFVGTWNCNAKRTQNLASWILSNSFSPDIIAIGLQEIVNMKAGAIVKA 452

Query: 77  YNAVAKVFPKNTWCIFYSTERL-----INHSKRDSNNDIHTAIA----VRKKNVRVLQQS 127
             A  +   +N +  +            +       N +   +     V++++   + + 
Sbjct: 453 TAADKQNNKENAYHPWKHDIEQTLATLGSSRYVKVMNKVLVGLMMLVYVKEEHYPHISEV 512

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
              +       + GN+  + +   +    I  ++ HL +    + +E        +    
Sbjct: 513 SGAIVPCGMMGKIGNKGGLGIRFTLYKTGICFVNSHLAAGPSHEKMERRTQDYKKIQMMT 572

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPN 231
            +     +          +  GD N +I+   N                +D         
Sbjct: 573 FENHLSILDH-----ESLIWFGDLNYRIDLTYNETKQLVEQKNWSKLQAHDQLNNERKSG 627

Query: 232 DSLIRFPKEKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEIL 279
            + + F +E  +     K              R     D  +   +        S  +I 
Sbjct: 628 KAFLGFSEEPTNFAPTYKYDIGTTTYDTSEKNRTPSWCDRILYRGD--------SLKQID 679

Query: 280 YNEDDIKSRGKRLSDHCPIS 299
           Y+  ++       SDH P+S
Sbjct: 680 YSRHELFE-----SDHRPVS 694


>gi|316975827|gb|EFV59223.1| putative SacI y domain protein [Trichinella spiralis]
          Length = 974

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 86/316 (27%), Gaps = 50/316 (15%)

Query: 23  KVRL--VSWNINTLSEQEGVSLWK-----NSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           ++RL   +WN+N       V         + +     ++     + K  D   + LQEM 
Sbjct: 518 QLRLFCGTWNVNGGQLASSVVFRNESSLADWLINLMPNFNGDASHRKLYDIYAIGLQEMV 577

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
             NA   +    ++             K  ++  I   + V+ + +  ++          
Sbjct: 578 DLNASNVLNASVSYQ----NSWRDAFLKELNSISICLFVFVQPELLVHIRDVSTAAVKTG 633

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
                GN+    +   +    +  +  H  +        N          +    L  + 
Sbjct: 634 FGGTIGNKGGTAISFTLGASSLCFICSHFTAGHSQVQERNDDYEGTCRRLRFPSGLNLF- 692

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP------------------------N 231
                S       GDFN +I+  G        +                           
Sbjct: 693 -----SHDFIFWFGDFNYRIDMAGEEVKHLVDLRDFDSLREADQLVQQKMAGCVFIEFEE 747

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPI----DYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
             +   P  K    + N +   K  +    D     +    F  Q++   ++Y       
Sbjct: 748 GLINFAPTYKYDAFSDNYDTSEKARVPAWTDRIFFRKRRPYFKAQDTCQLLVYC-----R 802

Query: 288 RGKRLSDHCPISIDYD 303
              + SDH P+   ++
Sbjct: 803 AELKTSDHRPVGAVFN 818


>gi|302830584|ref|XP_002946858.1| hypothetical protein VOLCADRAFT_56112 [Volvox carteri f.
           nagariensis]
 gi|300267902|gb|EFJ52084.1| hypothetical protein VOLCADRAFT_56112 [Volvox carteri f.
           nagariensis]
          Length = 355

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/275 (10%), Positives = 70/275 (25%), Gaps = 48/275 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-----MGSYN 78
           + ++SWN+  L                     L+        A ++ LQE       +  
Sbjct: 13  LNILSWNVAGLRAL------------VKKHPGLIPSLVWREGARVLCLQEHKLQGSHTGE 60

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             A +  +       +           S   +HTA       V +               
Sbjct: 61  MEAALGLQAGHDRGRAGWVCSTGKLGYSGVSVHTASRPLSVTVGLGAGGGSTSSPDSDPD 120

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                     +V +  ++ +V+++++ +                 +++       ++   
Sbjct: 121 PDSEHEVEGRVVTVELEEAFVVNVYVPNSGEG------LKRLDYRINRWDGAFAKYVKGL 174

Query: 199 KESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFPKEKD 242
           +    P ++ GD N     +  +                  F + +     L+   +E  
Sbjct: 175 ESRGKPVIVTGDLNCAHKEIDIHAPKTNLRSAGFTVEERESFGRLLLGEVGLVDTFRELF 234

Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYK 268
               A      +           +DYF+  +    
Sbjct: 235 PCTVAYTYFTRRFNCREQNKGWRLDYFLTSRALMP 269


>gi|255323939|ref|ZP_05365065.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141]
 gi|255299119|gb|EET78410.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141]
          Length = 305

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/340 (12%), Positives = 78/340 (22%), Gaps = 97/340 (28%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA 81
            + + S N+N +             +R  ++   +  + +   ADIV +QE+  +     
Sbjct: 2   TLTIASVNVNGIRA--------ACKQRNENN-PGMNAWLEETPADIVLMQEVRATPEQAE 52

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           K         ++          R         I  R     V         A        
Sbjct: 53  KALAPALEAGWHLALADAAAKGRA-----GVGILSRTPLADVEVGFGSFTDAGRW----- 102

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
                   +    + I V  ++L S    D+           L +  + L +   +    
Sbjct: 103 --------IAATTRDIRVASLYLPSG---DTGSPKLDEKYRFLDEFQEVLAENAARTNSD 151

Query: 202 LVP--FVIAGDFNRKI---------------NYLGNNDDFWKTIDPNDS----------- 233
             P   VI GD+N                   +L     F   +                
Sbjct: 152 GSPADMVIGGDWNICHRAQDLKNNKANEKKAGHLPEERAFMDHVFGAFPDDKPQEKKNLG 211

Query: 234 ----------------------LIRFPKEKDSRCNANKNLRNK---------IPIDYFVM 262
                                      +              +           IDY   
Sbjct: 212 QWQGVVEYAGGEPWAPAAEPQWFDVARRLHPEEDGPYTWWTYRGQAFNNNAGWRIDYQAA 271

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +   +   +          D   +  +R SDH P+ ++Y
Sbjct: 272 TRPMLERAQRTWV-------DKAPTVEQRWSDHSPLLVEY 304


>gi|126296|sp|P08548|LIN1_NYCCO RecName: Full=LINE-1 reverse transcriptase homolog
 gi|225048|prf||1207289B reverse transcriptase related protein
          Length = 1260

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/298 (10%), Positives = 75/298 (25%), Gaps = 73/298 (24%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             +++ + + S N+N L+                     L  + + L  DI  +QE    
Sbjct: 1   TGLSKGLSIFSINVNGLN--------------CPLKRHRLADWIQKLKPDICCIQESHLT 46

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                      W   +        +               K       +           
Sbjct: 47  LKDKYRLKVKGWSSIFQANGKQKKAGIAILFADAIGF---KPTKIRKDKDGHF------- 96

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                   + +       +I +++I+  +             +   + +    + + I+ 
Sbjct: 97  --------IFVKGNTQYDEISIINIYAPN-----------HNAPQFIRETLTDMSNLISS 137

Query: 198 KKESLVPFVIAGDFNRKINYLGNN------------DDFWKTIDPNDSLIRFPKEKDSRC 245
                   ++ GDFN  +  L  +            +   + +D  D    F   K    
Sbjct: 138 TS------IVVGDFNTPLAVLDRSSKKKLSKEILDLNSTIQHLDLTDIYRTFHPNKTEYT 191

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +        ID+ +  ++      +      ++            SDH  I ++ +
Sbjct: 192 FFSSAHGTYSKIDHILGHKSNLSKFKKIEIIPCIF------------SDHHGIKVELN 237


>gi|238062955|ref|ZP_04607664.1| hypothetical protein MCAG_03921 [Micromonospora sp. ATCC 39149]
 gi|237884766|gb|EEP73594.1| hypothetical protein MCAG_03921 [Micromonospora sp. ATCC 39149]
          Length = 424

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/293 (10%), Positives = 70/293 (23%), Gaps = 53/293 (18%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
            + +  VR+ SWN                     +D      Y     AD+  LQE   +
Sbjct: 159 PAPSGAVRVFSWNTEY--------------WYDGADPQHFHDYLAAQRADVYLLQEYVGW 204

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSN------NDIHTAIAVRKKNVRVLQQSYPLL 131
           + +A   P     +        ++                 A         +   +   +
Sbjct: 205 D-LAGHRPVPVDHVAELRRHFPDYQVVAVGELLTMSRYPIVASRALDGMPYLADPTRHGV 263

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK------SFCFLDSLENTYSPSCSLLS 185
            A   F+     + +   + ++G+ + V ++H+                           
Sbjct: 264 PADSDFADYYRHKVLRTDLRVDGQVLSVYNVHVPVQLDISMDPTESEFTAFMQAQQDRRQ 323

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
              + L+  +     +    ++AGDFN         +   +  D              + 
Sbjct: 324 AHYRALRADL---ASNPHGQLVAGDFNATSAMGELRELATRLTDAA--------VAGDQL 372

Query: 246 NANKNLRN--KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
                  +     +D+                       +      +  SDH 
Sbjct: 373 YPVSWPDSAAWWRLDWAFFTGPVRCH-------------EYRMVGSQGHSDHL 412


>gi|46203138|ref|ZP_00208816.1| COG3568: Metal-dependent hydrolase [Magnetospirillum
          magnetotacticum MS-1]
          Length = 84

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 11/63 (17%)

Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
          ++    + + ++RL+S+NI      +G                 + +      ADIV LQ
Sbjct: 13 MIAPDPAESGRLRLLSYNIRHCRGTDGRIAP-----------ERVARVVAATGADIVALQ 61

Query: 73 EMG 75
          E+ 
Sbjct: 62 EVD 64


>gi|313139567|ref|ZP_07801760.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313132077|gb|EFR49694.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 359

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/294 (9%), Positives = 78/294 (26%), Gaps = 32/294 (10%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +      L++ N                     +    +    +    D++ LQE+ 
Sbjct: 87  PPQASGDTYHLMTLNCRY----------------GKASADAIIAAVRERHIDVLALQEL- 129

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-----NVRVLQQSYPL 130
           S + + ++       I     R +   +  ++N     I  R K     +  V   +  +
Sbjct: 130 STDLIKRLERGGLHRIL--PYRQLGTPREKTDNGGFNGIWSRTKPKRGTHGIVSIPAADV 187

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G         +        +   +        ++S   L  +      + +   ++A  
Sbjct: 188 PGIMLQTDDGTSVAFASAHTKSPMRGCREWSDGIRSLSALVPMPRKSVSAGTGREERATG 247

Query: 191 LKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            K           +   V+ GD N  I++    +                         +
Sbjct: 248 SKGGRDGGSAYPDVDIAVLMGDLNADIDHASFRELLRSGFRDAALAQARGHV---NTFPS 304

Query: 249 KNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +    +I +D+ +   + +      E    + ++  +         DH  ++  
Sbjct: 305 QVPWPRIELDHIMAATRESASGSAAEPARAVAFSGVESFVVEDT--DHLALTAT 356


>gi|91095311|ref|XP_973868.1| PREDICTED: similar to reverse transcriptase homolog [Tribolium
           castaneum]
 gi|270017183|gb|EFA13629.1| hypothetical protein TcasGA2_TC005274 [Tribolium castaneum]
          Length = 971

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINY---LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
           Q L + + Q   SL   +I GDFN +         N +    ID   +L  +     S  
Sbjct: 117 QCLSNELMQYAASLPKAIILGDFNARHTDFGDTLTNRNGHILIDAISNLPLYRIPNSSPT 176

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + N        +D+ ++  +                 D         SDH P+  D  
Sbjct: 177 HINHWEGY-SIVDHILVTDSLS-----------NRASDSANIGTTITSDHLPLVFDLS 222


>gi|74198837|dbj|BAE30646.1| unnamed protein product [Mus musculus]
          Length = 435

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/232 (9%), Positives = 67/232 (28%), Gaps = 35/232 (15%)

Query: 21  AQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +    ++ +N+  +  + ++      +           + +   N DADI+  QE+ +  
Sbjct: 181 SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISFQEVETEQ 240

Query: 79  AVAKVFPKNT---WCIFYST---------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
                 P      +  F+S          +   +               V+K  V   Q 
Sbjct: 241 YFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV 300

Query: 127 SYPLLGAKDSFSRA---GNRRAVELLVEINGKKI------------WVLDIHLKSFCFLD 171
           +       ++        +   V +++E++ +               +L +      +  
Sbjct: 301 AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP 360

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK------ESLVPFVIAGDFNRKINY 217
              +       +   + + + +  + +        + +P V+  D N   + 
Sbjct: 361 EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDS 412


>gi|293392176|ref|ZP_06636510.1| cytolethal distending toxin protein B [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952710|gb|EFE02829.1| cytolethal distending toxin protein B [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 283

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 83/304 (27%), Gaps = 46/304 (15%)

Query: 8   ALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
            +   ++   +S A     ++ +WN+   S         N           +RQ      
Sbjct: 9   VVFCTMLFSFSSYANLSDFKVATWNLQGSSAVNESKWNIN-----------VRQLLSGEQ 57

Query: 66  -ADIVFLQEM---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            ADI+ +QE           S        P   +     T    N      +     A  
Sbjct: 58  GADILMVQEAGSLPSSAVRTSRVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANR 117

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           V    V   Q     +   DS     +R AV + +   G  ++     L +         
Sbjct: 118 VNLAIVSRRQADEAFIVHSDSSV-LQSRPAVGIRI---GTDVFFTVHALATGGSD----- 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               + SL+           +  +     +++ GDFNR    L         +  N  +I
Sbjct: 169 ----AVSLIRNIFTTFTSSPSSPERRGYSWMVVGDFNRAPVNLEAALRQEPAVSENTIII 224

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
              +            R+   +DY ++         Q           +        SDH
Sbjct: 225 APTE---------PTHRSGNILDYAILHDAHLPRREQARERIGASLMLNQLRSQIT-SDH 274

Query: 296 CPIS 299
            P+S
Sbjct: 275 FPVS 278


>gi|294952851|ref|XP_002787481.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983]
 gi|239902483|gb|EER19277.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983]
          Length = 563

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 61/216 (28%), Gaps = 26/216 (12%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +SWN+        + +  +           + +Y    D DI+ +QE  S  + A+V   
Sbjct: 1   MSWNVAGWIRTAKLIVKYHGS---------VAKYLMKHDVDILAVQE--SKVSKARVSSV 49

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146
                                        VR+        + P     DS      R   
Sbjct: 50  EAQQAVPMGYEAYWSHSTSKPGFNGVCTFVREGIPVRDVLNKPF---NDSRFDDEGR--- 103

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206
             LV  +   + ++++++ +                   Q    L+      +E     +
Sbjct: 104 -CLVTFHNDDVAIVNVYVPNGGEGG-------KRLPYKIQFLYKLRALCKGLREKGWRVI 155

Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           + GD N   +        ++ ID N  L   PK   
Sbjct: 156 LLGDLNMSPDPRDIW-WEYRIIDVNRLLADPPKGGR 190


>gi|254390461|ref|ZP_05005677.1| hypothetical protein SSCG_03230 [Streptomyces clavuligerus ATCC
           27064]
 gi|294816740|ref|ZP_06775382.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
           ATCC 27064]
 gi|326445641|ref|ZP_08220375.1| hypothetical protein SclaA2_31472 [Streptomyces clavuligerus ATCC
           27064]
 gi|197704164|gb|EDY49976.1| hypothetical protein SSCG_03230 [Streptomyces clavuligerus ATCC
           27064]
 gi|294321555|gb|EFG03690.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 355

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 60/205 (29%), Gaps = 23/205 (11%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +  +++R  +WNI                  + +      +    L  D++ LQE  SY 
Sbjct: 2   TDGRQLRAGTWNILCGGLGPDG---------SENRLRKQTEVLAALRPDVLALQEC-SYG 51

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                              +     R  ++   TA+  R++  R++ +  P   A   F 
Sbjct: 52  GHQGECRLLGLADALGMTPVAMEPSRVGDSLNFTALLYRREKPRLVDRRRP---AAQIFH 108

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            A  R A    V+       +L +         +       S         WL D     
Sbjct: 109 HALIR-ARFRPVDAGDDSRDLLVLATHLSHAGGTARLAEVGS---------WLTDHAGDF 158

Query: 199 KESLVPFVIAGDFNRKINYLGNNDD 223
             +    ++ GD N    +  + D 
Sbjct: 159 PGAPRRSILMGDLNCSGFHDPDPDW 183


>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
 gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
          Length = 1368

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 19/206 (9%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK--NLDADIVFLQEMGSYNAVA 81
           + + SWN+    E    S          + Y L+ +     +  ADI+ LQE+       
Sbjct: 341 LSIASWNVLADFEHSSSSSND-----QEARYRLILRNLLSPSAKADILLLQEVTDSFLCF 395

Query: 82  KVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            + P NT              S    +    + +      V + +  +       +    
Sbjct: 396 ILSPSNTSPESQALRHLYPYVSHPPPSQPDASPLPNFLNQVILSKHPFSWSWLPFARKHK 455

Query: 141 GNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           G+  A    +     G+ + +  +HL       +         +    + Q +   + +K
Sbjct: 456 GSVIARFPTIHGSNPGQPLVLAAVHLSHGLTDMT--------VAAKKGEMQRVIGHLKEK 507

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF 224
                P+V+AGDFN   +        
Sbjct: 508 FPEN-PWVVAGDFNLTSSSWTVEQAV 532


>gi|147825435|emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera]
          Length = 729

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 61/191 (31%), Gaps = 31/191 (16%)

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             +    R+ NR    ++++   +  +V+             E   +    L S+Q +  
Sbjct: 26  DNQPKTGRSDNRGIAVVVLDALTRLWFVMTFVFFYPRRQWVREEDLAKDLKLHSKQLRRT 85

Query: 192 KDWITQ-------KKESLVPFVIA-----GDFNRKINYLGNNDD---------FWKTIDP 230
             +  +        +  +  FV+      GDFN  +     +           F + ID 
Sbjct: 86  LRFFEEEKLVTRDHRREVNTFVVNVIHSWGDFNITLFQRERSRQGRITSTMWRFAQIIDE 145

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
              +    + +    +   N ++   +D F++  +              ++        +
Sbjct: 146 LGLVDLPLQGEVFTWSGGLNNQSWARLDRFLVPPS----------WLDHFSGVLQSRLPR 195

Query: 291 RLSDHCPISID 301
            +SDH P+ ++
Sbjct: 196 PISDHFPVLLE 206


>gi|261867601|ref|YP_003255523.1| cytolethal distending toxin protein B [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|4886841|gb|AAD32072.1|AF102554_1 cytolethal distending toxin B [Aggregatibacter
           actinomycetemcomitans]
 gi|34484432|gb|AAQ72838.1| CdtB [Aggregatibacter actinomycetemcomitans]
 gi|261412933|gb|ACX82304.1| cytolethal distending toxin protein B [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 283

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 83/304 (27%), Gaps = 46/304 (15%)

Query: 8   ALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
            +   ++   +S A     ++ +WN+   S         N           +RQ      
Sbjct: 9   VVFCTMLFSFSSYANLSDFKVATWNLQGSSAVNESKWNIN-----------VRQLLSGEQ 57

Query: 66  -ADIVFLQEM---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            ADI+ +QE           S        P   +     T    N      +     A  
Sbjct: 58  GADILMVQEAGSLPSSAVRTSRVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANR 117

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           V    V   Q     +   DS     +R AV + +   G  ++     L +         
Sbjct: 118 VNLAIVSRRQADEAFIVHSDSSV-LQSRPAVGIRI---GTDVFFTVHALATGGSD----- 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               + SL+           +  +     +++ GDFNR    L         +  N  +I
Sbjct: 169 ----AVSLIRNIFTTFTSSPSSPERRGYSWMVVGDFNRAPVNLEAALRQEPAVSENTIII 224

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
              +            R+   +DY ++         Q           +        SDH
Sbjct: 225 APTE---------PTHRSGNILDYAILHDAHLPRREQARERIGASLMLNQLRSQIT-SDH 274

Query: 296 CPIS 299
            P+S
Sbjct: 275 FPVS 278


>gi|12620109|gb|AAG60566.1|AF250771_2 ElsH [uncultured bacterium pCosHE1]
          Length = 106

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 29/112 (25%), Gaps = 17/112 (15%)

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
           L +W         P VIAGDFN       +       ++       F +           
Sbjct: 10  LAEWTNA-LPEGEPVVIAGDFNDWRQRANHPLKVEAGLEE-----IFTRAHGRPARTFPV 63

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + +D   +                           + LSDH P+S + 
Sbjct: 64  RFPLLRLDRIYVKNAHASS-----------PTALALLNWRHLSDHAPLSAEI 104


>gi|89255526|ref|YP_512887.1| hypothetical protein FTL_0086 [Francisella tularensis subsp.
           holarctica LVS]
 gi|167010302|ref|ZP_02275233.1| hypothetical protein Ftulh_06185 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|89143357|emb|CAJ78527.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica LVS]
          Length = 239

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 96/282 (34%), Gaps = 56/282 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++K  L+SWN            +K   K + +    +R      + DI  LQE   ++  
Sbjct: 11  SKKFCLMSWN-----------SYKIDHKDSETFSAYIRHVYFKYNIDIFCLQEAVHHHGS 59

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              FP + + I +++  ++           H  +    K +   ++S             
Sbjct: 60  K--FPIDKFDINFASNIVLRSHNYGVATVSHYPVIKNVKILTTHRESVINTH-------- 109

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             + ++   + IN  K+ V++IH  +F            S  +   + + +K++I   ++
Sbjct: 110 --KASLITHLNINNTKVIVVNIHAINF-----------KSNKVYEYEFEKIKEFIA-PEK 155

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P +IAGDFN    +        K             ++     + +N      +D+ 
Sbjct: 156 YKHPIIIAGDFN---TWNRKRVKLIKDFCREFCFKVAFIDEPQLVKSFQN----NHLDFV 208

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    + +                      ++SDH PI  ++
Sbjct: 209 LYRGLSLEKAAVLDCK--------------KISDHNPIIAEF 236


>gi|119716471|ref|YP_923436.1| peptidase M23B [Nocardioides sp. JS614]
 gi|119537132|gb|ABL81749.1| peptidase M23B [Nocardioides sp. JS614]
          Length = 1048

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 77/288 (26%), Gaps = 44/288 (15%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           +  C       + + + N+      +                    +  +N    I  LQ
Sbjct: 505 VANCQGETVNPITVGTLNLLGAGHTDKPGERAGYDT-WDKRLPGAMRTIENAGVTITGLQ 563

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E+    A      +     + +   +   S +  N        V        Q    L+G
Sbjct: 564 EVHGPQA------QALENQYAAKWGMYPASGKAQNR-------VIWDRNEWEQTDGRLVG 610

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                 +      V+L     G+ IWV  IH  +     +  +        L +Q   + 
Sbjct: 611 IPYFGGKDVGMPLVQLTSTTTGQVIWVWSIHNPANTQGSAAGHRQ----EALRRQLATMT 666

Query: 193 DWITQKKESLVPFVIAGDFNRKIN-YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           +       +  P VI GDFN   +    ++      +                C      
Sbjct: 667 EL----AGTGTPAVILGDFNDGKDGSNASHCALTPELSN------AFGGSAEPCK---KP 713

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +   PID+          L             D  ++  +++DH P+ 
Sbjct: 714 KQDAPIDHVY-----GANLTWAGAEV------DTSTQASKIADH-PLV 749


>gi|170114372|ref|XP_001888383.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636695|gb|EDR00988.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 224

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/249 (12%), Positives = 68/249 (27%), Gaps = 34/249 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            V++V+WN++  +    +      ++    D    +      +  ++ LQE+        
Sbjct: 1   SVKVVTWNVD-FNNNHEMERLNACLRHLERDVLGCKDGEAPAEPCVILLQEVKEQMIPHL 59

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +  +     F  T +  +        D +            + ++  L            
Sbjct: 60  LQDEWVRQHFMVTPKTKDKW----PKDAYYGNITLVSRDLTVVKAQILHYG----YSTMQ 111

Query: 143 RRAVELLV-----EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           R A+ + +     E  G    V+ I       L +  +       L ++  +   DW+  
Sbjct: 112 RSALAVSIVMGVPESGGGGETVVCIVNTHLESLPAGADARPRQLQLCTRFLKQ--DWVQG 169

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----N 253
                   ++AGD N               I     L    ++ D               
Sbjct: 170 G-------MVAGDMNAIGPSD-------AMITKEVGLRDAWRKGDETGFTWGYQGGGNFP 215

Query: 254 KIPIDYFVM 262
              +D  + 
Sbjct: 216 PNRLDKMLF 224


>gi|301620318|ref|XP_002939536.1| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase-like
           [Xenopus (Silurana) tropicalis]
          Length = 798

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 74/312 (23%), Gaps = 65/312 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +                 +   D+  +  QE+         
Sbjct: 152 VGTYNVNGQSPRESLQTWLSQD---------------SEPPDLYCIGFQELDLSKEAFFF 196

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S                   I     V+K+    + +          
Sbjct: 197 NDTPKEEEWFKAVSDGLHPEAKYAKIKLIRLVGIMLLLYVKKELAVHVSEVEAETVGTGI 256

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +    +   + +++ HL +        N          Q AQ       
Sbjct: 257 MGRMGNKGGVAIRFRFHNTHLCIVNSHLAAHVDEFERRNQDFREICSRMQFAQADPTLSP 316

Query: 197 QKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDSLIRFPK 239
                    +  GD N ++  +                    D   + ID       F +
Sbjct: 317 LTIHKHDVVLWLGDLNYRLKDIELEKVKKLIDSRDYKTLHKFDQLKQQIDGKAVFEGFTE 376

Query: 240 EKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +       K              R     D  +        L            +    
Sbjct: 377 GEIMFQPTYKYDPGTDEWDTSEKCRTPAWCDRVLWKGKHITQL------------EYRSH 424

Query: 288 RGKRLSDHCPIS 299
              + SDH P+S
Sbjct: 425 MALKTSDHKPVS 436


>gi|296471278|gb|DAA13393.1| phosphatidylinositol polyphosphate 5-phosphatase [Bos taurus]
          Length = 784

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 74/309 (23%), Gaps = 47/309 (15%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDLNP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK  +R ++     
Sbjct: 283 TEAFFYFESVKEQEWSLAVERSLHSKAKYKKVQLVRLVGMMLLIFARKDQLRYIRDVATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEEFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTID------PNDSLIR 236
            +             +  GD N ++            N +D  + +              
Sbjct: 403 NQTLPQLNIMKHDVVIWLGDLNYRLCMPDASEVKSLINKNDLQRLLKFDQLNIQRTQKKA 462

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMD-----QNAYKFLIQESFSEILYNEDDIKSRGKR 291
           F    +         +     D +              ++    +              +
Sbjct: 463 FADFMEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGINVNQL--HYRSHMELK 520

Query: 292 LSDHCPISI 300
            SDH P+S 
Sbjct: 521 TSDHKPVSA 529


>gi|163840638|ref|YP_001625043.1| hypothetical protein RSal33209_1896 [Renibacterium salmoninarum
           ATCC 33209]
 gi|162954114|gb|ABY23629.1| hypothetical membrane protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 331

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/290 (10%), Positives = 62/290 (21%), Gaps = 75/290 (25%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                 +  + + + N+   +                              AD+V LQE 
Sbjct: 117 APATGQSFTLSVATQNVQASTVPMASG-----------------SALMAQSADLVALQE- 158

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                   + P              +             +A+  K   +      L G  
Sbjct: 159 --------LSPGKIPQNAEQIYPCQDAGG---------TVALLSKYPVLESSRLELGGVA 201

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            S        A+   V+  G ++ +  +H  S    +          +        L   
Sbjct: 202 WSR-------ALHATVQTPGGELSIYVVHAASVRLGEH---------ADRDVMLSNLDRI 245

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           I+Q  +     ++ GDFN         D                         +     +
Sbjct: 246 ISQ--DKSSRIMVLGDFNAAST-----DRALAGFQDKFIESLPDSGGLGFTWPSSFPVTR 298

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
              D+    +                     K   +  SDH  +     +
Sbjct: 299 P--DHIF-SKGL--------------ETKSSKVLEQAGSDHRGLQSTLTW 331


>gi|156121029|ref|NP_001095661.1| inositol polyphosphate 5-phosphatase OCRL-1 [Bos taurus]
 gi|154757627|gb|AAI51697.1| OCRL protein [Bos taurus]
          Length = 784

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 74/309 (23%), Gaps = 47/309 (15%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+  S
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDLNP---------------PDIYCIGFQELDLS 282

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            +         + +    RK  +R ++     
Sbjct: 283 TEAFFYFESVKEQEWSLAVERSLHSKAKYKKVQLVRLVGMMLLIFARKDQLRYIRDVATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEEFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTID------PNDSLIR 236
            +             +  GD N ++            N +D  + +              
Sbjct: 403 NQTLPQLNIMKHDVVIWLGDLNYRLCMPDASEVKSLINKNDLQRLLKFDQLNIQRTQKKA 462

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMD-----QNAYKFLIQESFSEILYNEDDIKSRGKR 291
           F    +         +     D +              ++    +              +
Sbjct: 463 FADFMEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGINVNQL--HYRSHMELK 520

Query: 292 LSDHCPISI 300
            SDH P+S 
Sbjct: 521 TSDHKPVSA 529


>gi|145476891|ref|XP_001424468.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391532|emb|CAK57070.1| unnamed protein product [Paramecium tetraurelia]
          Length = 882

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/330 (13%), Positives = 91/330 (27%), Gaps = 72/330 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQEMG 75
           +   + + +V+WN+                 +T S    L +   +  ADI+   LQEM 
Sbjct: 552 SFSDRSILVVTWNV---------------GGQTVSQSYDLNKQIVDYAADIIVVGLQEMV 596

Query: 76  SYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSY 128
           +          +        I  +  +   +    S   +   + +  +++    + +  
Sbjct: 597 TSGTGLVVGSNQYLQDWDKLIANNLRQKDKYIYIKSKELLGIGLFIYAKERFQDRITKVS 656

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                     + GN+ AV + + I+   I  ++ HL+      S                
Sbjct: 657 YDTIKLGFLGQIGNKGAVVIKMLIDDTLICFINCHLEHGQKSLSTRLQSLKDIHQNIFNQ 716

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--------------------------- 221
             +     +K E     ++ GD N +IN   +                            
Sbjct: 717 IGIGKKKEEKIEQCDYRILFGDLNFRINQEADKVITSTQRHKLFIDQSRIHEAKETLQYI 776

Query: 222 -----------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270
                      + + K    +D       + +   N    LR     D  ++ QN     
Sbjct: 777 VHLILETCKKQNQYLKQYKESDINFLPTYKFEPYSNIYDKLRTPSWTDRILVGQN----- 831

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                    +     K      SDH P+S 
Sbjct: 832 -----EHCEHKYQYYKCHDINYSDHRPVSA 856


>gi|119627714|gb|EAX07309.1| inositol polyphosphate-5-phosphatase, 75kDa, isoform CRA_c [Homo
           sapiens]
          Length = 913

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 260 TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 317

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 318 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 377

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 378 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 437

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 438 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 497

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 498 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 545

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 546 TSDHKPVSSVFD 557


>gi|110591317|pdb|2F1N|A Chain A, Structure Of Cdtb, The Biologically Active Subunit Of
           Cytolethal Distending Toxin
          Length = 262

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 95/283 (33%), Gaps = 43/283 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVA 81
             R+ +WN+   S         N           +RQ     +A DI+ +QE GS  + A
Sbjct: 15  DFRVATWNLQGASATTESKWNIN-----------VRQLISGENAVDILAVQEAGSPPSTA 63

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                       +   + +          + +   R + V +   +   LG + + +   
Sbjct: 64  ----------VDTGRVIPSPGIPVRELIWNLSTNSRPQQVYIYFSAVDALGGRVNLALVS 113

Query: 142 NRRAVEL----LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
           NRRA E+     V   G+ +  + I   +F    ++    + + +L+ +   + +D    
Sbjct: 114 NRRADEVFVLSPVRQGGRPLLGIRIGNDAFFTAHAIAMRNNDAPALVEEVYNFFRDS-RD 172

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
                + ++I GDFNR+   L  N             +   +  +    A     ++  +
Sbjct: 173 PVHQALNWMILGDFNREPADLEMN-----------LTVPVRRASEIISPAAATQTSQRTL 221

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           DY V   +            +         R +  SDH P+ +
Sbjct: 222 DYAVAGNSVAFRPSP-----LQAGIVYGARRTQISSDHFPVGV 259


>gi|197104868|ref|YP_002130245.1| hypothetical protein PHZ_c1402 [Phenylobacterium zucineum HLK1]
 gi|196478288|gb|ACG77816.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 324

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/250 (11%), Positives = 60/250 (24%), Gaps = 52/250 (20%)

Query: 54  YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
                 +    D D+V ++E  S     KV     W +  +T                  
Sbjct: 120 LDDTLNWVLAQDPDVVVMEET-SPPLREKVRGLAGWHVSCATCE---------------- 162

Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
           + +  +   +  ++  L G                +      +  V+ +H          
Sbjct: 163 VMILSRRPPIRSEAVRLRGPNPG-------PLTRAVFRDRRGRYAVIGVHYAWPT----- 210

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-IDPND 232
                        Q   L + I          ++AGDFN             +  +   D
Sbjct: 211 ------DMEDHQAQEAGLAEVIAM--GPRERTIVAGDFNSAPWSFSRRRWDAEFGLIRRD 262

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
             +        +          + ID+     +              +    ++   +  
Sbjct: 263 RALLTWPALQYKRLRWLGWFPFLAIDHVYAGSD--------------WATVSVERGPRLG 308

Query: 293 SDHCPISIDY 302
           SDH P+ +  
Sbjct: 309 SDHYPVVMSL 318


>gi|156935277|ref|YP_001439193.1| hypothetical protein ESA_03130 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533531|gb|ABU78357.1| hypothetical protein ESA_03130 [Cronobacter sakazakii ATCC BAA-894]
          Length = 260

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 91/303 (30%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P  A +     +R++ WNI                ++     ++L+ + K  
Sbjct: 18  FASIGKALPAGAPLPGDGSLRVLVWNIF--------------KQQRAEWLSVLQNFGKE- 62

Query: 65  DADIVFLQEMGSYNAVAKVFPKNT----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            A +V LQE  +   + +    N         +   +  +     S         +R++ 
Sbjct: 63  -AHLVLLQEAQTTPELVRFATTNYLAADQVPAFVLPQHPSGVMTLSAAHPVYCCPLRERE 121

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             +      L               V +    +G+ + V++IH  +F     + +     
Sbjct: 122 PILRLSKSAL---------------VTVYPLPDGRLLMVVNIHAVNFSLGVDVYS----- 161

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 162 --------KQLGPIGDQIGHHSGPVIMAGDFNAW-SRPRMNALYRFAREMSLREVRFTDD 212

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                        +      R SDH P+ +
Sbjct: 213 QRRRAFGRP-------LDFVFYRG---------------LAVQEASVLVTRASDHNPLLV 250

Query: 301 DYD 303
           ++ 
Sbjct: 251 EFS 253


>gi|119716270|ref|YP_923235.1| hypothetical protein Noca_2039 [Nocardioides sp. JS614]
 gi|119536931|gb|ABL81548.1| hypothetical protein Noca_2039 [Nocardioides sp. JS614]
          Length = 285

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 78/281 (27%), Gaps = 31/281 (11%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A       + S+N+      +G         R+        +  +   A IV  QE 
Sbjct: 34  AAAAVPQDDFVIASFNVLGADHTDGRRGRPGFD-RSDVRLDRAIKVLRRTHAAIVGFQE- 91

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                    F ++    F +           +  D   +IA R      ++     +   
Sbjct: 92  ---------FQRSQHDRFLARVGDKWAVYAGAEWDTDNSIAWRTDRFAFVEGWSVAVPYF 142

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
              +R      V L    + + ++V++ H  +    ++ +     +    +   +  ++ 
Sbjct: 143 HGNTRYMP--VVGLRSLASDRMVYVMNTHHAADTRGNATQWRREATRIERNTTRKLTRNL 200

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
                   VP  + GD N           F+     N   +       +           
Sbjct: 201 -------NVPVFMTGDMND-------RAAFFCPFTRN--QVMRSFLGGANPKDGSCNPPA 244

Query: 255 IPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRLS 293
             +D+   ++     +  I  S      ++  I S   RLS
Sbjct: 245 SGVDWIFANKYAALERPRINRSALVQATSDHPIVSVHVRLS 285


>gi|226942449|ref|YP_002797522.1| catabolite repression control protein Crc [Azotobacter vinelandii
           DJ]
 gi|226717376|gb|ACO76547.1| catabolite repression control protein; Crc [Azotobacter vinelandii
           DJ]
          Length = 259

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 73/272 (26%), Gaps = 59/272 (21%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  + +  +AD++ LQ     +  A  F  +          L        +      +A+
Sbjct: 19  LLSWLQAQNADVICLQ-----DTRASAFELDDPTYQLDGYFLYTSEAEVPSQG---GVAL 70

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +               D + R          ++ +  K+ +  + L S    D     
Sbjct: 71  YSRLQPKAVIGGLGFETADRYGRY---------LQADFDKVSIATLLLPSGQGGD----- 116

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG---------------DFNRKINYLGNN 221
              S +   +       ++ +++     ++  G               D  +   +L   
Sbjct: 117 --ESLNQKFKFMDDFARYLEKQRRKRREYIYCGSLYVAHQKQDVKNWRDCQQLPGFLAPE 174

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFLIQ 272
             +   I  +   +   +E     +                    DY ++     +F+  
Sbjct: 175 RAWMDQIIGHMGYVDALRETSREGDLYSWWPDSEQAEMLNLGWRFDYQLLTPGMRRFVRN 234

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          R  R S H P+ +DYD+
Sbjct: 235 A-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|269102308|ref|ZP_06155005.1| hypothetical protein VDA_001734 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268162206|gb|EEZ40702.1| hypothetical protein VDA_001734 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 356

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/334 (10%), Positives = 74/334 (22%), Gaps = 83/334 (24%)

Query: 53  DYTLLRQYAKNLDADIVFLQEMGS----------YNAVAKVFPKNTW-----CIFYSTER 97
            +  +    +++  D++ L E              N       +  +        YS   
Sbjct: 20  RFKKIAATIQSVRPDVLLLCEFDHLGEGGDNGALQNFCRHYLNRFQYDLSPIHYPYSYCP 79

Query: 98  LINHSK-------------------RDSNNDIHTAIAVRKKNVR----------VLQQSY 128
             N  K                          H    +  K             +L Q  
Sbjct: 80  SSNTGKLSPVDLNNDGIISLPEDGLGFGLFHGHYGFVLLSKYPIKTDEIQSWQTLLWQQV 139

Query: 129 PLLGAKDSFSRAGNRRAV--------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           P       +     +  +         + +E + + I +L  H     F          +
Sbjct: 140 PNSLLPTQYYSPQAQSVLPLSSKNHVCVPIEYDEQIINILCCHPTPPVFDGEERRNAKRN 199

Query: 181 CSLLSQQAQWL--KDWITQKKESL------VPFVIAGDFNRKI-NYLGNNDDFWKTIDPN 231
              L      +   D++   +          PFV+ GD N    +  G        ++  
Sbjct: 200 HDELRLLVDIIDGADYLVSDQGQTSGINLQQPFVVMGDLNADPIDGDGIKAGIDALLNHP 259

Query: 232 DSLIRFPKEKDSRCNAN----------------KNLRNKIPIDYFVMD------QNAYKF 269
                         +                      + + +DY +         +   +
Sbjct: 260 LIEKSVATGAKVPASLGGKYKRVYQKRNGKPDIWTHVSGLRLDYVLPSTHCHIQNSGVFW 319

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             ++    +       K      SDH  + +D  
Sbjct: 320 PDKKDPKRVWITNHSGKETSAAYSDHRLVWVDVT 353


>gi|134080370|emb|CAK46292.1| unnamed protein product [Aspergillus niger]
          Length = 1115

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 86/299 (28%), Gaps = 53/299 (17%)

Query: 15   PCTASVAQKVR---LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIV 69
            P   + +  +    L++WNI              +  +T    T +      LD   DI+
Sbjct: 848  PADPAGSGDISRLVLLTWNI------------DATSPQTEKRVTEIITCIIGLDPRVDII 895

Query: 70   FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            FLQE+        +  +    ++ S+E         S      A+ +     R    +  
Sbjct: 896  FLQEVSKPALQQILKDERVRELWLSSECDDTSWGDQSF-----AVMILLSKARFTTNAAI 950

Query: 130  LLGAKDSFSRAGNRRAVELLVEING------KKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
                +  F     R A+   + +         +I ++++HL S     S         + 
Sbjct: 951  GPIWRVKFPSHFARDALCCDIFVPSPKEPKPARIRLVNVHLDSLPIKPSHRPKQVSIATS 1010

Query: 184  LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
            L + A                 ++AGDF+  ++     +   +     D+      E+  
Sbjct: 1011 LLRVAGQ--------------GLVAGDFDPVLDED---NGLLEKNGLVDAWATLRPEEPG 1053

Query: 244  RCNA--NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHCPIS 299
                   K       +D           L       +        S  + L SDH  + 
Sbjct: 1054 FTWGLDGKQPFPPNRLDKI-----GILRLRSHEIKTLEPKPISGSSDDEPLWSDHHALI 1107


>gi|258627370|ref|ZP_05722154.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258580408|gb|EEW05373.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 281

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 82/313 (26%), Gaps = 47/313 (15%)

Query: 1   MIRKYVLALV---------FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M ++Y +  +         FF +    S  + V +   N          +     + +  
Sbjct: 1   MKKRYWILPILLSVVGISAFFSIFTIPSQPELVTIG-HNQQGEPLLCYQNPKPQVLDQDG 59

Query: 52  SDYTLLRQYAKNLDADI-VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
               L+    K    +    L +  +   +  +   N    F +           +    
Sbjct: 60  QINLLVWNIYKQNRPNWQAALADFSAPQQLLLLQEANMNEAFKAWISQYGWDGTQTRAFE 119

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCF 169
               A    N+  +  +      +        + A+     ++ + ++ V+++H  +F +
Sbjct: 120 AFGEAAGVINLAKVMPAMACAYTQLEPWLRLPKSAIYARYRLSNQQELAVVNLHAVNFTY 179

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                           +Q   L D +        P ++AGDFN               + 
Sbjct: 180 GT----------QEYQEQIAALLDELRSFAG---PVIVAGDFNSW--SEARMALLSAALT 224

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                    +  +          N +P+D+        K                     
Sbjct: 225 DIGLQTVVFESDNRTTFI-----NGLPLDHVFYRGLILKKAEA---------------PQ 264

Query: 290 KRLSDHCPISIDY 302
              SDH P+ + +
Sbjct: 265 SDASDHNPLLVSF 277


>gi|237720522|ref|ZP_04551003.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229450273|gb|EEO56064.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 356

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/376 (10%), Positives = 79/376 (21%), Gaps = 99/376 (26%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----------------VRLVSWNINTLSEQEGVSLWKN 45
           ++K++L ++  ++P   + ++                 ++ +  N+              
Sbjct: 1   MQKWLLTIIIAILPVITACSKTDTEVSVPEEETGKKTEIKFLQLNLW------------V 48

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
              +       L +    L  DI    E+        V PK    +              
Sbjct: 49  ECTKVEHAPEYLIEQIATLQPDIATFCELYKGPQDDPVMPKLMQGL--------KDKGLI 100

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
             +      AV  K      +       K      G R AV         +      +  
Sbjct: 101 YYDARIDGRAVISKYPFKETERINKWMFKAILDVNGKRVAVY----PAHSEYRYYTCYYP 156

Query: 166 SFCFLDSLENTYSPS-------------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
                 S+     P+              S   + AQ   +   ++ E       AGD N
Sbjct: 157 RGYNDGSVNWDKLPAPITDVNKILAVCEESDRIESAQAFINNAAKELEQGALVFFAGDLN 216

Query: 213 RKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSR--CNANKNL----- 251
                    D                 K +        +         C           
Sbjct: 217 EPSYLDWQADTKDLFDHRGCIVNWGTSKLLVQRGYKDAYRVIHPDPVKCPGFTFPADNKS 276

Query: 252 ------------RNKIPIDYFVMDQNAYKFLIQESF-------------SEILYNEDDIK 286
                         +  ID+     N    +                   E   +     
Sbjct: 277 VIPENLSWAPEADERERIDFVYYYPNKNLQIKSAQIVGPTGSIVRGQRIEEQTKDPIIPP 336

Query: 287 SRGKRLSDHCPISIDY 302
              +  SDH  + I +
Sbjct: 337 VNNQWPSDHKGVLITF 352


>gi|93279405|pdb|2F2F|B Chain B, Crystal Structure Of Cytolethal Distending Toxin (Cdt)
           From Actinobacillus Actinomycetemcomitans
 gi|93279408|pdb|2F2F|E Chain E, Crystal Structure Of Cytolethal Distending Toxin (Cdt)
           From Actinobacillus Actinomycetemcomitans
 gi|3702219|dbj|BAA33486.1| Cytolethal distending toxin B [Actinobacillus sp.]
 gi|4003374|dbj|BAA35117.1| cytolethal distending toxin [Actinobacillus actinomycetemcomitans]
 gi|241994933|gb|ACS74737.1| cytolethal distending toxin B subunit [Aggregatibacter
           actinomycetemcomitans]
 gi|241994935|gb|ACS74738.1| cytolethal distending toxin B subunit [Aggregatibacter
           actinomycetemcomitans]
          Length = 283

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 83/304 (27%), Gaps = 46/304 (15%)

Query: 8   ALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
            +   ++   +S A     ++ +WN+   S         N           +RQ      
Sbjct: 9   VVFCTMLFSFSSYANLSDFKVATWNLQGSSAVNESKWNIN-----------VRQLLSGEQ 57

Query: 66  -ADIVFLQEM---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            ADI+ +QE           S        P   +     T    N      +     A  
Sbjct: 58  GADILMVQEAGSLPSSAVRTSRVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANR 117

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           V    V   Q     +   DS     +R AV + +   G  ++     L +         
Sbjct: 118 VNLAIVSRRQADEAFIVHSDSSV-LQSRPAVGIRI---GTDVFFTVHALATGGSD----- 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               + SL+           +  +     +++ GDFNR    L         +  N  +I
Sbjct: 169 ----AVSLIRNIFTTFTSSPSSPERRGYSWMVVGDFNRAPVNLEAALRQEPAVSENTIII 224

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
              +            R+   +DY ++         Q           +        SDH
Sbjct: 225 APTE---------PTHRSGNILDYAILHDAHLPRREQARERIGASLMLNQLRSQIT-SDH 274

Query: 296 CPIS 299
            P+S
Sbjct: 275 FPVS 278


>gi|224282423|ref|ZP_03645745.1| hypothetical protein BbifN4_01192 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 390

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/294 (9%), Positives = 78/294 (26%), Gaps = 32/294 (10%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +      L++ N                     +    +    +    D++ LQE+ 
Sbjct: 118 PPQASGDTYHLMTLNCRY----------------GKASADAIIAAVRERHIDVLALQEL- 160

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-----NVRVLQQSYPL 130
           S + + ++       I     R +   +  ++N     I  R K     +  V   +  +
Sbjct: 161 STDLIKRLERGGLHRIL--PYRQLGTPREKTDNGGFNGIWSRTKPKRGTHGIVSIPAADV 218

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G         +        +   +        ++S   L  +      + +   ++A  
Sbjct: 219 PGIMLQTDDGTSVAFASAHTKSPMRGCREWSDGIRSLSALVPMPRKSVSAGTGREERATG 278

Query: 191 LKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            K           +   V+ GD N  I++    +                         +
Sbjct: 279 SKGGRDGGSAYPDVDIAVLMGDLNADIDHASFRELLRSGFRDAALAQARGHV---NTFPS 335

Query: 249 KNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +    +I +D+ +   + +      E    + ++  +         DH  ++  
Sbjct: 336 QVPWPRIELDHIMAATRESASGSAAEPARAVAFSGVESFVVEDT--DHLALTAT 387


>gi|218200121|gb|EEC82548.1| hypothetical protein OsI_27091 [Oryza sativa Indica Group]
          Length = 486

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/310 (9%), Positives = 71/310 (22%), Gaps = 84/310 (27%)

Query: 51  TSDYTLLRQYAKNLDADIVFLQ-----EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
                 + +  + + ADI+ LQ     E    + ++++         ++      +    
Sbjct: 170 EGRRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEY---- 225

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
                    AV  +      +S  +    D F  +  R        +  K   +L++   
Sbjct: 226 -------GDAVLSRWPIKRWKSQRVADQSD-FRCSKVRYVRAKNFRVESKHGLILNVDNH 277

Query: 166 -------------------------SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                                    +        +      S   +Q   +         
Sbjct: 278 LSDRSKKCLYFEMKNVLRATIEVPRAGEVNFHCTHLDHLDESWRMKQMNAILR------S 331

Query: 201 SLVPFVIAGDFNR-KINYLGNNDD------------------FWKTIDPNDSLIRFPKEK 241
           S  P ++ G  N        +                       K +     +       
Sbjct: 332 SDGPHILTGGLNALDGTDYSDERWADIVKYYEEIGKPTPKAEVMKYLKGKQYVDAKDFAG 391

Query: 242 D--------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
           +           +     +    +DY +   N+    +  S++ I              S
Sbjct: 392 ECEAVVVVAKGQDVQGTCKYGTRVDYILASPNSPYKFVPGSYTVISSKGT---------S 442

Query: 294 DHCPISIDYD 303
           DH  + +D  
Sbjct: 443 DHHIVKVDVT 452


>gi|119627715|gb|EAX07310.1| inositol polyphosphate-5-phosphatase, 75kDa, isoform CRA_d [Homo
           sapiens]
          Length = 913

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 260 TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 317

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 318 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 377

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 378 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 437

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 438 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 497

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 498 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 545

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 546 TSDHKPVSSVFD 557


>gi|113722125|ref|NP_005531.2| type II inositol-1,4,5-trisphosphate 5-phosphatase precursor [Homo
           sapiens]
 gi|55665970|emb|CAH69929.1| inositol polyphosphate-5-phosphatase, 75kDa [Homo sapiens]
 gi|55666458|emb|CAH70079.1| inositol polyphosphate-5-phosphatase, 75kDa [Homo sapiens]
          Length = 913

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 260 TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 317

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 318 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 377

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 378 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 437

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 438 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 497

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 498 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 545

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 546 TSDHKPVSSVFD 557


>gi|326931346|ref|XP_003211793.1| PREDICTED: inositol polyphosphate 5-phosphatase K-like [Meleagris
           gallopavo]
          Length = 540

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 101/321 (31%), Gaps = 57/321 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           + LV+WN+ T S    V+               L   +  +D  ++ LQE+ S   N ++
Sbjct: 93  LHLVTWNVGTASPPPDVTS-----------LLQLDSLSPAMDMYVIGLQEVNSRITNFLS 141

Query: 82  KVFPKNTWCIFY-STERLINHSKRDSNNDIHTAIAVRKKNVRV--LQQSYPLLGAKDSFS 138
            +   + W IF+ S    + + K  S       + +  K+  +  ++  +        + 
Sbjct: 142 DLAFDDPWSIFFMSVLSPLGYIKLSSVRMQGLLLLIFVKHAHLPFIRDVHTHYTRTGLYG 201

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + + + G  I  ++ HL +                 +  + + + + +   
Sbjct: 202 YWGNKGGVTIRMSLYGHTICFINCHLPAHMENTEQRLDDFEKILEMQFEEENIPNTLDH- 260

Query: 199 KESLVPFVIAGDFNRKINYLGNN-------DDFWKTIDPNDSLIRF-------------- 237
                     GD N +I   G +       +  +  +   D L                 
Sbjct: 261 ----DVLFWFGDLNFRIADYGIHFVRESINNKRYNLLWEKDQLNMAKKKEAFLQEFIEGP 316

Query: 238 --------PKEKDSRCNANKNLRNKIPIDYFVMD-QNAYKF------LIQESFSEILYNE 282
                           + ++  R     D  +   ++  +         +E  +  +   
Sbjct: 317 LQFKPTYKFDLHSDVYDTSEKKRKPAWTDRILWRVKSLCQRALKEDDFSEEEQTISVTLN 376

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
           + I      +SDH P++  ++
Sbjct: 377 NYISHMSYGISDHKPVTGTFE 397


>gi|255597554|ref|XP_002536800.1| ap endonuclease, putative [Ricinus communis]
 gi|223518503|gb|EEF25584.1| ap endonuclease, putative [Ricinus communis]
          Length = 130

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 36/139 (25%), Gaps = 35/139 (25%)

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINY---------------LGNNDDFWKTIDPND 232
            +     + + K      VI GD+N                    L     +   I    
Sbjct: 1   MEVFLPHLQELKAEGREIVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWMTRIFDEL 60

Query: 233 SLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNED 283
            L+   +  D R        N+           IDY V            S         
Sbjct: 61  GLVDVHRGIDQRPEQYTWWSNRGQAWAKNVGWRIDYHVATPGIAARAHAVSI-------- 112

Query: 284 DIKSRGKRLSDHCPISIDY 302
               + +R SDH P+ IDY
Sbjct: 113 ---YKDERFSDHAPLIIDY 128


>gi|262231799|ref|NP_766027.2| phosphatidylinositol 4,5-bisphosphate 5-phosphatase A [Mus
           musculus]
 gi|74206634|dbj|BAE41572.1| unnamed protein product [Mus musculus]
 gi|124297199|gb|AAI31635.1| Inositol polyphosphate 5-phosphatase J [Mus musculus]
 gi|124297492|gb|AAI31636.1| Inositol polyphosphate 5-phosphatase J [Mus musculus]
 gi|148708480|gb|EDL40427.1| phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A, isoform
           CRA_b [Mus musculus]
          Length = 1003

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 76/317 (23%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      +D               + LQE+ S     + 
Sbjct: 422 ITVVTWNVGTAMPPDDVTSLLHLGSGHDNDG---ADMIA------IGLQEVNSMINKRLK 472

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S   +   I +   +  ++  L+             
Sbjct: 473 DALFTDQWSELFMDALGPFNFVLVSTVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 532

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +      
Sbjct: 533 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAHG 588

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 589 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSNQLHQLWEKDQLNMAKNTWPILKGFQEGP 648

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              +ES    +      
Sbjct: 649 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPSGGPSPSGRESHRLQVTQHSYR 708

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 709 SHMEYTVSDHKPVAAQF 725


>gi|74222646|dbj|BAE42196.1| unnamed protein product [Mus musculus]
          Length = 1003

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 76/317 (23%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      +D               + LQE+ S     + 
Sbjct: 422 ITVVTWNVGTAMPPDDVTSLLHLGSGHDNDG---ADMIA------IGLQEVNSTINKRLK 472

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S   +   I +   +  ++  L+             
Sbjct: 473 DALFTDQWSELFMDALGPFNFVLVSTVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 532

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +      
Sbjct: 533 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAHG 588

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 589 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSNQLHQLWEKDQLNMAKNTWPILKGFQEGP 648

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              +ES    +      
Sbjct: 649 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPSGGPSPSGRESHRLQVTQHSYR 708

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 709 SHMEYTVSDHKPVAAQF 725


>gi|30315981|sp|P59644|PI5PA_MOUSE RecName: Full=Phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A; AltName: Full=Inositol polyphosphate 5-phosphatase J
 gi|26329831|dbj|BAC28654.1| unnamed protein product [Mus musculus]
          Length = 1003

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 76/317 (23%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      +D               + LQE+ S     + 
Sbjct: 422 ITVVTWNVGTAMPPDDVTSLLHLGSGHDNDG---ADMIA------IGLQEVNSMINKRLK 472

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S   +   I +   +  ++  L+             
Sbjct: 473 DALFTDQWSELFMDALGPFNFVLVSTVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 532

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +      
Sbjct: 533 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAHG 588

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 589 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSNQLHQLWEKDQLNMAKNTWPILKGFQEGP 648

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              +ES    +      
Sbjct: 649 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPSGGPSPSGRESHRLQVTQHSYR 708

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 709 SHMEYTVSDHKPVAAQF 725


>gi|332535960|ref|ZP_08411657.1| endonuclease/exonuclease/phosphatase family protein
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332034660|gb|EGI71216.1| endonuclease/exonuclease/phosphatase family protein
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 327

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/324 (9%), Positives = 78/324 (24%), Gaps = 90/324 (27%)

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++  QE+ S +++ ++  +  +  +++                  AIA +     V    
Sbjct: 1   MIGFQEVFSIDSLKELVGEQGYN-YFAVVDTPEVIDDFIYKRPVVAIASKYPIFEVAAVE 59

Query: 128 YP---LLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
           +          +     +R+ +   +    I     +V+    K         N      
Sbjct: 60  HDSELANALGLNSEFTFSRKVLRATITLPHIGNTDCYVVHFKSKRPMINVDEHNKELTPE 119

Query: 182 SLLSQQAQW-------------------LKDWITQKKESLVPFVIAGDFNRKINYLGNND 222
             + +  +                    +   I +++ +  P ++ GDFN ++     + 
Sbjct: 120 QNIIEILKANVAGGWGSTIQRGSEATLLMIQMIARREATQQPMLLMGDFNNELADGVLSH 179

Query: 223 DFWKTI------------------------------------------------DPNDSL 234
               T+                                                + N   
Sbjct: 180 LLTSTLRFAPAFDAKTYLAKYCLNDSWDLFVKSQLNEVGLSNGEAMTSDEISDSESNGIF 239

Query: 235 IRFPKEKDSRCNAN-------KNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
               + +    NA                   +DY ++        +   F  I YN  D
Sbjct: 240 DLADENEAKNVNATKLMPLRSPTHYYGASSSVLDYILLSCEFDASYLGSFFEVIEYNTYD 299

Query: 285 I------KSRGKRLSDHCPISIDY 302
                    R    +DH  + +  
Sbjct: 300 RHLINPEFERDDLSTDHGIVLVTL 323


>gi|294934718|ref|XP_002781206.1| hypothetical protein Pmar_PMAR019530 [Perkinsus marinus ATCC 50983]
 gi|239891541|gb|EER13001.1| hypothetical protein Pmar_PMAR019530 [Perkinsus marinus ATCC 50983]
          Length = 607

 Score = 48.8 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 84/299 (28%), Gaps = 46/299 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+ +WN+              S+ R       +    ++   DI+ +QE       A++
Sbjct: 330 LRVGTWNVWF-----SKKSPSQSLCRQEEVKKFVCGVYEDGWPDILMVQESNLSAHRAQI 384

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                 C F++  R   +     +    T I V  +   V +        ++  +   +R
Sbjct: 385 ------CYFHTHLRRFEYLTGYKSQVHDTGILVNCEKFSVAR-----PVPEELLTTVKDR 433

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL--SQQAQW-----LKDWIT 196
                   I   ++      +           +   +CS      QA       L     
Sbjct: 434 LVKAHCGAIPHGQLATALSRICVVELEHEKMQSRFFACSFHATRHQANACSSAVLLFLQE 493

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255
               + +P ++ GDFN          D    +D N  L            + K  R K  
Sbjct: 494 LSDATRIPVLVGGDFNC---------DIVDLLDGNPDLDNALAGLTVAEYSYKRHRFKGN 544

Query: 256 ---PIDYFVMDQNAYKF--------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ID   +               +   SF E L+ +D          DH P+     
Sbjct: 545 RDKLIDRLAVINPRSNREFDLKLHGVAACSFEESLFVDDHEPGVRVF--DHLPVMGQLS 601


>gi|326445869|ref|ZP_08220603.1| hypothetical protein SclaA2_32612 [Streptomyces clavuligerus ATCC
           27064]
          Length = 364

 Score = 48.8 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/342 (9%), Positives = 72/342 (21%), Gaps = 86/342 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++++ +NI                 R       +      ++ D+V L E         
Sbjct: 42  KLKVMQFNIWLGGS------------RVPGGRAGIADTIAAVEPDVVMLSESNPERVAHL 89

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +                       +N      AV  +   +   S+P             
Sbjct: 90  LADLAE------------RGLTYFDNKNPVDPAVISRYPIIEHASFPYWSKAVVSVDGTE 137

Query: 143 RRAVELLVEI------------NGKKIWVLDIHLKSFCFLDSLENT-----YSPSCSLLS 185
             A    +E              G    +                         + S  +
Sbjct: 138 VAAYSGHLEYRYYVNYLPRGYGGGTPSPLETSEYGWGEIPTGPITDTGLITRLNAASGRT 197

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPN 231
           +  + +     +++      ++AGDFN   +   N+                  K I+  
Sbjct: 198 KVTRTVLADAAEERAKGRLTLLAGDFNEPSHRDWNHRTRNLFDHNGTVVTWSTTKAIEDA 257

Query: 232 DSLIRFPKEKDSR------CNANKNLR-------------NKIPIDYFVMDQNAYKFLIQ 272
                +                + N                +  ID+     +    L+ 
Sbjct: 258 GFRDSYRVIHPDPVRRPGFTWPSDNPGADVSQLTWAPKADERDRIDFVFYHPDRRIHLLD 317

Query: 273 ESF------------SEILYNEDDIKSRGKRLSDHCPISIDY 302
                           E    +   +      +DH  +   +
Sbjct: 318 SVIVGPSSTIVRNQRVEESGRDRFWEPTWTWPTDHKAVLSTF 359


>gi|123974883|ref|XP_001314048.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
 gi|121896071|gb|EAY01233.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
          Length = 308

 Score = 48.8 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 87/309 (28%), Gaps = 60/309 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           ++++N+                  +           K  D  I+  QE+G +  +A    
Sbjct: 9   VMTFNL----------------AASDVPLDAFSFLPKGYDMYILGFQEVGPFIPLACDAK 52

Query: 86  KNTWCIFYSTERLINHSKRDSNN--DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           +N       T+    +    +     +   IAV+K++ + +  +        +    GN+
Sbjct: 53  QNALSQILETKFEKEYFIMTNMTMLGLKLFIAVKKEHEKYVWANNEYFIPTGADGAYGNK 112

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
            AV + +  +  KI  +  H  +        N             + +       +E   
Sbjct: 113 GAVAVSINYDQTKILFICAHFAAHEKAILDRNRNYSDIMT-----KIISYSGCDPREMHN 167

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------- 253
                GD N +I+   ++           +LI + + +  R + +               
Sbjct: 168 FIFFFGDLNYRIDLSYDDAKRLSMAGMYPNLILYDQLQRERTSIHVFSGFSEEEITFPPT 227

Query: 254 ------------------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                 D  +   N+ K L   S+                 SDH
Sbjct: 228 YKFDKDSMLYDTSKKERVPSYCDRILFFANSRKTLTVNSY---------TSYMDVMFSDH 278

Query: 296 CPISIDYDF 304
            P+  D+ F
Sbjct: 279 RPVVADFTF 287


>gi|254784446|ref|YP_003071874.1| histidine kinase [Teredinibacter turnerae T7901]
 gi|237684162|gb|ACR11426.1| histidine kinase [Teredinibacter turnerae T7901]
          Length = 257

 Score = 48.8 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/271 (9%), Positives = 72/271 (26%), Gaps = 60/271 (22%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  DADI+ LQ++ +        +F  + +  ++            S    +  +
Sbjct: 19  LFDWIEEQDADIICLQDLRALEYELDDDIFHPDGYFAYFFD----------SGVKHYNGV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  ++            +                V++ G+ + V          L    
Sbjct: 69  AIYTRHQPKALIYGLGFASG---------------VDMEGRYLQVDFERYSIGSLLAPTA 113

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223
            + + S  +  +     +  + +       F+  G++    +     +            
Sbjct: 114 FSETESQEVKIKFFDDFQALLHKVTRKRRHFIFCGNWAMAHSKKDVENWQNNTNQSGYLP 173

Query: 224 ----FWKTIDPNDSLIRFPKEKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFLIQ 272
               +   +          +                    +    DY V+ +   + +  
Sbjct: 174 HEQQWMNQLFRQLGYADAFRVAVPEAGEYSWWPSGKIGEGDGWRTDYQVVSEALTRKV-- 231

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                    E     + +  S H P+ +DYD
Sbjct: 232 ---------EYAAMYKTRHFSSHLPVIVDYD 253


>gi|219518136|gb|AAI44107.1| Oculocerebrorenal syndrome of Lowe [Homo sapiens]
          Length = 893

 Score = 48.8 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 73/319 (22%), Gaps = 67/319 (21%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSY 77
           Q  R  + +WN+N  S   G+  W N                     DI  +  QE+   
Sbjct: 238 QTFRFFVGTWNVNGQSPDSGLEPWLNCDPNP---------------PDIYCIGFQELDLS 282

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-------IAVRKKNVRVLQQSYPL 130
                 F       +        HSK                 I  RK   R ++     
Sbjct: 283 TEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVEMMLLIFARKDQCRYIRDIATE 342

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N               
Sbjct: 343 TVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVP 402

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDS 233
            +             +  GD N ++     N                 D          +
Sbjct: 403 NQTLPQLNIMKHEVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKA 462

Query: 234 LIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYN 281
            + F + +       K                    D  +            + +++ Y 
Sbjct: 463 FVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGT--------NVNQLNYR 514

Query: 282 EDDIKSRGKRLSDHCPISI 300
                    + SDH P+S 
Sbjct: 515 SH----MELKTSDHKPVSA 529


>gi|118600637|gb|AAH22915.1| Inpp5j protein [Mus musculus]
          Length = 905

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 76/317 (23%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      +D               + LQE+ S     + 
Sbjct: 422 ITVVTWNVGTAMPPDDVTSLLHLGSGHDNDG---ADMIA------IGLQEVNSMINKRLK 472

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S   +   I +   +  ++  L+             
Sbjct: 473 DALFTDQWSELFMDALGPFNFVLVSTVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 532

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +      
Sbjct: 533 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAHG 588

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 589 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSNQLHQLWEKDQLNMAKNTWPILKGFQEGP 648

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              +ES    +      
Sbjct: 649 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPSGGPSPSGRESHRLQVTQHSYR 708

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 709 SHMEYTVSDHKPVAAQF 725


>gi|145594885|ref|YP_001159182.1| endonuclease/exonuclease/phosphatase [Salinispora tropica CNB-440]
 gi|145304222|gb|ABP54804.1| Endonuclease/exonuclease/phosphatase [Salinispora tropica CNB-440]
          Length = 259

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 73/308 (23%), Gaps = 79/308 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA-- 81
           +RL ++N+     +    +          D   L      LDAD++ LQE+      +  
Sbjct: 1   MRLATFNLLHGRSRTDGLV----------DSRRLTAAVAALDADVLALQEVDRGQGRSGN 50

Query: 82  ---------------------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
                                      +     T       E          +  I   I
Sbjct: 51  LDQTALAAHALAACEHRFAAAVVGEPGRQVRPLTHDDDGHDEPRFGVGLVSRHPVISWQI 110

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
                         P         +   R  +  ++      +     HL      +   
Sbjct: 111 IRLTPAPVRAPVYVPGSRGGLVLLQDEPRVVLAAVLRTPHGLVTAAATHLSFVPGWN--- 167

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                        A  L+  +   +    P ++ GD N               +    + 
Sbjct: 168 -------------AHQLRQTVRALRALPAPRILLGDLN---------------LPAGCAR 199

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           +        R       R +I +D+ + D+     L   +      +          +SD
Sbjct: 200 LLTGWHPLGRRPTYPAGRPRIQLDHVLADRQDRHRLPPVTAVRTPLSV---------ISD 250

Query: 295 HCPISIDY 302
           H P+ +D 
Sbjct: 251 HRPLVVDL 258


>gi|53749387|gb|AAU90246.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1275

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 69/261 (26%), Gaps = 51/261 (19%)

Query: 50  TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109
            ++   LL++  K  D DIV LQE    N   +          +S     +         
Sbjct: 442 NSARRGLLKEMIKLRDIDIVGLQETKRENFSNRELNSFQGSKTFSWAWKASRGASGGILL 501

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
                 V    V +++                    +         +I V+      +  
Sbjct: 502 G-----VNTDKVELIRNHV---------GAYFLSCVIRHKFNQKTWEIVVV------YGP 541

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------- 221
           +         S      Q            +S  PF+I GDFN        +        
Sbjct: 542 VTDSLKQSFLSELSWHLQ------------DSPHPFIIGGDFNPYRFAKEKSNSNLDFRA 589

Query: 222 -DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280
            D F   I   D                ++   +  +D  ++ Q            E +Y
Sbjct: 590 MDLFNSFILDMDLSELHRSGARFTFTNKQDCPTQEVLDRVLVSQ----------LWEAIY 639

Query: 281 NEDDIKSRGKRLSDHCPISID 301
               + S  +  SDH P+ +D
Sbjct: 640 PISTLLSITRIGSDHSPLILD 660


>gi|19551901|ref|NP_599903.1| exonuclease III [Corynebacterium glutamicum ATCC 13032]
 gi|21323437|dbj|BAB98064.1| Exonuclease III [Corynebacterium glutamicum ATCC 13032]
          Length = 304

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/295 (8%), Positives = 61/295 (20%), Gaps = 81/295 (27%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           + +    D+V LQE+ +         +      +       +    +       + +  +
Sbjct: 30  WLEETRPDVVLLQEVRASEKDTATALQPALDNGWH------YIGAPAAAKGRAGVGILSR 83

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +               SF  +G      +        + V  ++L S       ++    
Sbjct: 84  HELEDVN-----IGFGSFLDSGRYIEATIKDTTLDVPVTVASLYLPSGSAGTDKQDEKYR 138

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------------- 224
                       + ++ Q+ +     VI GD+N         +                 
Sbjct: 139 -------FLDEFEGFLDQRAKERSHMVIGGDWNICHRREDLKNWKTNQKKSGFLPDERAF 191

Query: 225 --------------------------------WKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                                            +            + +           
Sbjct: 192 MDSVFGTFPDEATQVAGAGDFFGAVDYEGTRRREATTDPAWFDVARRLQPEGDGPYTWWT 251

Query: 253 NK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +           IDY        +   +          D   +   R SDH P+
Sbjct: 252 YRGKAFDTGAGWRIDYQAATAAMLERAERSWV-------DKAAAYDLRWSDHSPL 299


>gi|148708479|gb|EDL40426.1| phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A, isoform
           CRA_a [Mus musculus]
          Length = 907

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 76/317 (23%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      +D               + LQE+ S     + 
Sbjct: 430 ITVVTWNVGTAMPPDDVTSLLHLGSGHDNDG---ADMIA------IGLQEVNSMINKRLK 480

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S   +   I +   +  ++  L+             
Sbjct: 481 DALFTDQWSELFMDALGPFNFVLVSTVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 540

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +      
Sbjct: 541 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAHG 596

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 597 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSNQLHQLWEKDQLNMAKNTWPILKGFQEGP 656

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              +ES    +      
Sbjct: 657 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPSGGPSPSGRESHRLQVTQHSYR 716

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 717 SHMEYTVSDHKPVAAQF 733


>gi|307325841|ref|ZP_07605041.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
 gi|306888629|gb|EFN19615.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
          Length = 340

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 76/316 (24%), Gaps = 80/316 (25%)

Query: 1   MIRKYVLALVFFLVPCTA--------------SVAQKVRLVSWNINTLSEQEGVSLWKNS 46
           ++R+  +ALV  L+P  A                   + +V  N+               
Sbjct: 88  LLRRSAIALVALLLPVAAWTYLFGGLLLPGAKPGPHDLVVVQHNV--------------- 132

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
                +D     +   +   D++ L+E+                     E+ +       
Sbjct: 133 -SDENTDPAGTARALADAGPDLIALEEL-------------VPAALPVHEKTLAPDYPYH 178

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  +  R              G  +++SR      +  +V     +I     HL S
Sbjct: 179 AVRGTVGLWSRHPLTDARPLDIKPQGITEAWSR-----GLRTVVHTPRGEIAAYVAHLPS 233

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
                        + S   + A  L   I    E     ++ GD N  ++  G      +
Sbjct: 234 -----VRIRASGLASSWRDESAGLLGKAIA--AEKRDRLILLGDLNGTVDDRGLAPLTSR 286

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                               +         ID  +    A   +     +          
Sbjct: 287 MNVAERGF----------AFSFPASFPLARIDQVMARSAAVGHIRTLPAT---------- 326

Query: 287 SRGKRLSDHCPISIDY 302
                 SDH PI+   
Sbjct: 327 -----GSDHLPIAARI 337


>gi|326664792|ref|XP_003197888.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1140

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 70/272 (25%), Gaps = 62/272 (22%)

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
              ++      +    K    D+  LQE     A+  +     W   ++    I      
Sbjct: 11  RSVKSLVRAQSIFSLLKTFKTDVFLLQEC----ALPFLKNYKKWEDLWTPGPSIWSGSNF 66

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
           + ND    +A+   N  +L +   ++             A+   + +  +   VL+ +  
Sbjct: 67  NKND---GVAILINNPNILVKGSTVVRDGR---------AILANLTVLDRDFNVLNFY-- 112

Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-- 223
                       +            L + I       VPF++AGDFN  +          
Sbjct: 113 -------GFTDKNKRF--------ELLEDIQPHMLGRVPFILAGDFNCVLTQKDRRRADD 157

Query: 224 --------FWKTIDPNDSLIRFPKEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLI 271
                     + +  +  L+   K    R                IDY            
Sbjct: 158 FKVDKTSVLLQGLVRDFKLVDCFKAMHQREEGFTWFSGDGTRASRIDYMFTRD------- 210

Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   Y   D K      SDH  +S    
Sbjct: 211 --------YPPTDAKLTPLFFSDHLMLSCTLS 234


>gi|313226167|emb|CBY21310.1| unnamed protein product [Oikopleura dioica]
          Length = 1298

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 64/212 (30%), Gaps = 21/212 (9%)

Query: 55  TLLRQYAKNL-DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113
             +R       + DI FL E+   N  +++   + W   +S            ++ I++A
Sbjct: 720 EKVRDIIGRTKNIDIYFLNELRVEN--SEIKDSSCWPTGFSIHSHNKLPH---SDLIYSA 774

Query: 114 IAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
           +  R      ++++S+ +                        ++I +  I+         
Sbjct: 775 LMTRDSTIKNLIKESFSIGPITGLLLE-----------NHKKERICLFSIYRPIPKPGKE 823

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
               ++          +W+K  +   +      ++AGDFN   N    N D    +    
Sbjct: 824 NCFYHNYENQDPKIFIKWIKKALEIARNRKAAVILAGDFNVDFNRDEGNSDLAAELKEVL 883

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264
             +       +             ID+ ++  
Sbjct: 884 KGLIDLCIHPTFFR---KKSKGSKIDHIMVTN 912


>gi|147767377|emb|CAN62439.1| hypothetical protein VITISV_044009 [Vitis vinifera]
          Length = 1290

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/274 (10%), Positives = 68/274 (24%), Gaps = 55/274 (20%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+RLVSWN+   ++               S   +++   ++  AD+V + E         
Sbjct: 268 KLRLVSWNVRGANDS--------------SKRKVIKAMIRSQRADLVCIPETKIQTMTEG 313

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           V        F     +               I V      +      +     S      
Sbjct: 314 VVRSLGSXRFLDWGXMGAQGLXG-------GILVCXDKRSLELLEMEVGNFFISCRLK-- 364

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
                    +    +W+                        L ++   ++          
Sbjct: 365 --------NVEDGVVWIFTGVYGPC---------NRKEREELWEELGAIRGIWE------ 401

Query: 203 VPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            P+ + GDFN  ++    +           F + +D    +    +      +  ++ + 
Sbjct: 402 EPWCLGGDFNVTLSQRDRSRQGSLNGAMRRFAQVVDDLALIDLPLQGGVYSWSGGRSNQT 461

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
              +D F++ Q             +     D   
Sbjct: 462 WARLDRFLVSQGWLDIFKGAVQCRLPRPTSDXFP 495


>gi|125554828|gb|EAZ00434.1| hypothetical protein OsI_22458 [Oryza sativa Indica Group]
          Length = 300

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 76/208 (36%), Gaps = 25/208 (12%)

Query: 16  CTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSV-KRTTSDYTLLRQYAKNLDADIVFL 71
            + S      ++S+NI   N       + L       R  S   L+ +  ++ D D+V L
Sbjct: 84  ASTSDGDACTIMSYNILADNNAHYHPDLYLDVPWDAMRWDSRRRLIIREIRHWDPDLVCL 143

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE+  +  +A       +   +          R  +     A   + K + +L+++    
Sbjct: 144 QEVDRFRDIATEMENRGYQSRF--------KGRTGDAKDGCATFWKSKGLHLLEENSIDF 195

Query: 132 GAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                     N  A   + E+N  +K+ V +IH+    F     +       +L ++A  
Sbjct: 196 SE----YNLRNNVAQIFVFELNRAQKLVVGNIHV---LFNPKRGDVKLGQIRMLLEKANA 248

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYL 218
           L +     K   +P V+AGDFN   +  
Sbjct: 249 LAE-----KWGGIPIVLAGDFNSTPDLD 271


>gi|307185028|gb|EFN71257.1| Recombination repair protein 1 [Camponotus floridanus]
          Length = 232

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/268 (11%), Positives = 70/268 (26%), Gaps = 75/268 (27%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82
           +++ +WN++ +      +                  Y    DADIV LQE     + +  
Sbjct: 28  LKICTWNVSGIRAVIKKNGM---------------DYIIKEDADIVALQETKCDKDKLPN 72

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +  ++   +   +            +A+  K   +  +     G  +S   +  
Sbjct: 73  EVKLPGYHHYFVDSKKPGY----------CGVALFSKEKPISVK----YGLNNSDFDSEG 118

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
           R      +     + ++++++LK+                                    
Sbjct: 119 RM-----ITAEFPEFFIVNVYLKNPKTNTKNAGFTKEER--------------------- 152

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK----NLRNKIPID 258
                 GD           D           L+   KE      +      N      +D
Sbjct: 153 ------GDM---------TDFLATGFIDTFRLLYPDKEGAYTFWSYFANARNKDIGWRLD 197

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIK 286
           YF++ +     +      + +Y  D+  
Sbjct: 198 YFLVSERMKNKVCDNVIRKQVYGRDNWP 225


>gi|256824851|ref|YP_003148811.1| hypothetical protein Ksed_10000 [Kytococcus sedentarius DSM 20547]
 gi|256688244|gb|ACV06046.1| uncharacterized conserved protein [Kytococcus sedentarius DSM
           20547]
          Length = 365

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 69/274 (25%), Gaps = 60/274 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V++N              +    T SD   L         D++ L E  S+      
Sbjct: 141 LSVVTYN--------------SLGSLTASDLERLE---SEFQPDLLVLPET-SHARAQAA 182

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W     T  L   +  +S+    T + +R                  + +    +
Sbjct: 183 VDAAGWPGTAVTHGLAARTAPESSPIEATTVLLRDGLPE----------YTPAEAEPSLQ 232

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V L     G+ + +   +        SL           ++ A               
Sbjct: 233 GNVRLEPTEPGQPLVLGVHYAPPLPGFMSLWRDDLSRSVAEAEAAAQ-----------DG 281

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-KIPIDYFVM 262
           P V+ GD N  + +        + +            +      +      +  ID+ ++
Sbjct: 282 PVVLVGDLNATMRHGAL--AGMEGLVDTARAC----GRPEGTWPSHWPAWGRSAIDHVLV 335

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            + A                   ++     SDH 
Sbjct: 336 SEGAEVL--------------SCQALRLSGSDHL 355


>gi|159042638|ref|YP_001531432.1| hypothetical protein Dshi_0082 [Dinoroseobacter shibae DFL 12]
 gi|157910398|gb|ABV91831.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 374

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/368 (10%), Positives = 88/368 (23%), Gaps = 72/368 (19%)

Query: 4   KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           ++ L L   + P   + A+ VR+  ++    +   G+ L              +      
Sbjct: 8   RFCLVLALLVGPLRLT-AETVRVAYFHTELSARGPGLLLRDLRRDEAPDQLAAVLDILVE 66

Query: 64  LDADIVFLQEMGSYNAVAKVF---------PKNTWCIFYSTERLINHSKRDSNNDIHT-- 112
              DIV L ++      A +                 F +       +  D + D     
Sbjct: 67  TAPDIVLLADIDYDAGQATLAALQTALAQRGLPLPHGFTAAPNTGVPTGLDLDRDGKWDE 126

Query: 113 --------------AIAVRKKNVRV----------LQQSYPLLGAKDSFSRAGN---RRA 145
                          + +  +   +          L   +P     +++        R +
Sbjct: 127 PEDTQAFGEFRGAGGLVLLSRYPILRDEITDLSGLLWAEFPAASLPETYGPEEQAVIRLS 186

Query: 146 VELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW-ITQKK 199
                ++      G  + +L +H     F    +     +   +   A +L  W      
Sbjct: 187 ATGHWDVPVRLPSGDVLRLLTLHATPPVFDGPEDRNGRRNADQMRLWADYLNGWRPEGTA 246

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR----------------------- 236
             L   V+ G  N               +  +  L                         
Sbjct: 247 PPLGKAVVLGTLNADPQDGEARPGALARLRAHPRLQDPAPQATGAAAATRAQGGVNARHG 306

Query: 237 --FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                +     +        + +DY +  ++    +           +    +R +  S 
Sbjct: 307 GDPAHDTVDWPDTRPTDPGNLRVDYILPTRDLT--VTGAGLHWPDPEDAAALARTETASR 364

Query: 295 HCPISIDY 302
           H  I +D 
Sbjct: 365 HRLIWVDL 372


>gi|297665433|ref|XP_002811083.1| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase-like,
           partial [Pongo abelii]
          Length = 639

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 83/314 (26%), Gaps = 61/314 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           + ++N+N  S +E + LW             L    +  D   V  QE+           
Sbjct: 91  VGTYNVNGQSPKECLRLW-------------LSNGIQAPDVYCVGFQELDLSKEAFFFHD 137

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFS 138
              +  W    S    ++             I     VR+++   + +            
Sbjct: 138 TPKEEEWFKAVSEGLHLDAKYAKVKLIRLVGIMLLLYVRQEHAAYISEVEAETVGTGIMG 197

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R GN+  V +  + +   I +++ HL +        N          Q  Q         
Sbjct: 198 RMGNKGGVAIRFQFHNTSICIVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLT 257

Query: 199 KESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEK 241
             +    +  GD N +I  L                    D     +        F + +
Sbjct: 258 ISNHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQTLYAYDQLKIQVAAKTVFEGFTEGE 317

Query: 242 DSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +     K              R     D  +           ++ +++ Y         
Sbjct: 318 LTFQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MA 365

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+S  +D
Sbjct: 366 LKTSDHKPVSSVFD 379


>gi|224012501|ref|XP_002294903.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220969342|gb|EED87683.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 2488

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 62/257 (24%), Gaps = 26/257 (10%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAV 116
           Q  + L  DI+ + E                            +   +  + +      +
Sbjct: 79  QTIQELGIDIMAMCESNRAWTYKNKQEYERQTHLLWHNTRTVFASCPTGAEGYQPGGNVL 138

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSL 173
                   +           F     R       +++        V          L + 
Sbjct: 139 NINGPAAGRVKATGTDKWGRFCWMELRGQRDEGWVIISA----YRVCQEESHKPGALTAY 194

Query: 174 ENTYSPSCSL-------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
              Y+   S          Q    L   IT K+E     ++  D N       +  +   
Sbjct: 195 MQQYTAMLSAGITRPNPRQQILDDLLHLITSKREQGFRPILLMDANEDWVTNSHGKNQLA 254

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                 +L     E+  +        N   +DY ++D  A   +              + 
Sbjct: 255 DFMAAANLQDAFYERHQQSPPTYTRGN-SRLDYILVDPVALPCI---------RRVGYLG 304

Query: 287 SRGKRLSDHCPISIDYD 303
           +     SDHC   +D+D
Sbjct: 305 THEGNFSDHCLEYVDFD 321


>gi|92114229|ref|YP_574157.1| hypothetical protein Csal_2107 [Chromohalobacter salexigens DSM
           3043]
 gi|91797319|gb|ABE59458.1| conserved hypothetical protein [Chromohalobacter salexigens DSM
           3043]
          Length = 367

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 73/253 (28%), Gaps = 44/253 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
                L +  +  D DIV   E  ++         +    + +   L N           
Sbjct: 118 RQSASLMRQIRETDPDIVLTLESDAWWQERLDETLDESHPYATRIPLDNL---------- 167

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      Q   L+                     +G ++    +H +     +
Sbjct: 168 YGMHLYSRLPVHAPQIEWLIQDDIPSIHGWFELP-------SGDRVRFHAVHPRPPAPGE 220

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           S E+ +  +  LL  Q           ++S +P ++AGD N  + +      F +    +
Sbjct: 221 SDESLWRDAELLLVGQ---------TIRDSGLPTLVAGDLND-VAWSKTTRLFCRI---S 267

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L              +    + P+D+  + ++              +    ++     
Sbjct: 268 GMLDPRRGRGLYSTFHAEYRWLRWPLDHVFVSEH--------------FTLVALQRLSAF 313

Query: 292 LSDHCPISIDYDF 304
            SDH PI   + +
Sbjct: 314 GSDHFPILATFRY 326


>gi|34533153|dbj|BAC86611.1| unnamed protein product [Homo sapiens]
          Length = 638

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 81/326 (24%), Gaps = 51/326 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                   ++ +V+WN+ T    + V+   +      SD   +           + LQE+
Sbjct: 48  AALGPSEPRITVVTWNVGTAMPPDDVTSLLHLGGGDDSDGADMIA---------IGLQEV 98

Query: 75  GS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129
            S     +      + W   +       +    S+  +   I +   +  ++  L+    
Sbjct: 99  NSMLNKRLKDALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQT 158

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      GN+  V + +   G  +  L+ HL +             +   +    Q
Sbjct: 159 DCTRTGLGGYWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQ 214

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND--------------------------D 223
             +    Q           GD N +I     +                            
Sbjct: 215 QFQGPGAQGILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWP 274

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFS 276
             K             + D+  N        R     D  +              ++S  
Sbjct: 275 ILKGFQEGPLNFAPTFKFDAGTNKYDTSAKKRKPAWTDRILWKVKAPGGGPSPSGRKSHR 334

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
             +            +SDH P++  +
Sbjct: 335 LQVTQHSYRSHMEYTVSDHKPVAAQF 360


>gi|22126975|ref|NP_670398.1| hypothetical protein y3099 [Yersinia pestis KIM 10]
 gi|45442540|ref|NP_994079.1| hypothetical protein YP_2772 [Yersinia pestis biovar Microtus str.
           91001]
 gi|149366920|ref|ZP_01888954.1| hypothetical protein YPE_2178 [Yersinia pestis CA88-4125]
 gi|153948010|ref|YP_001400031.1| hypothetical protein YpsIP31758_1050 [Yersinia pseudotuberculosis
           IP 31758]
 gi|167399890|ref|ZP_02305408.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Antiqua str. UG05-0454]
 gi|218928246|ref|YP_002346121.1| hypothetical protein YPO1077 [Yersinia pestis CO92]
 gi|229841008|ref|ZP_04461167.1| endonuclease-exonuclease-phosphatase family member [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229843113|ref|ZP_04463259.1| endonuclease-exonuclease-phosphatase family member [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229903524|ref|ZP_04518637.1| endonuclease-exonuclease-phosphatase family member [Yersinia pestis
           Nepal516]
 gi|39932536|sp|Q8ZH34|Y1077_YERPE RecName: Full=UPF0294 protein YPO1077/y3099/YP_2772
 gi|166977869|sp|A7FFK3|Y1050_YERP3 RecName: Full=UPF0294 protein YpsIP31758_1050
 gi|21960018|gb|AAM86649.1|AE013910_11 hypothetical protein y3099 [Yersinia pestis KIM 10]
 gi|45437405|gb|AAS62956.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|115346857|emb|CAL19743.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149291294|gb|EDM41369.1| hypothetical protein YPE_2178 [Yersinia pestis CA88-4125]
 gi|152959505|gb|ABS46966.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|167050598|gb|EDR62006.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Antiqua str. UG05-0454]
 gi|229679294|gb|EEO75397.1| endonuclease-exonuclease-phosphatase family member [Yersinia pestis
           Nepal516]
 gi|229689460|gb|EEO81521.1| endonuclease-exonuclease-phosphatase family member [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229697374|gb|EEO87421.1| endonuclease-exonuclease-phosphatase family member [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|320014213|gb|ADV97784.1| endonuclease-exonuclease-phosphatase family member [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 260

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 79/290 (27%), Gaps = 75/290 (25%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMGS 76
             A+ +R+V WNI                              K L  D  ++ LQE  +
Sbjct: 38  PTAELLRVVVWNI------------------FKQQRAGWLPVLKELGRDTQLMLLQEAQT 79

Query: 77  YNAVAKVFPKNTWCI----FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              + +    +         +S  +  +     +         +R++   +      L+ 
Sbjct: 80  TPELVRFATASYQAADQVPAFSLPQHPSGVMTLAAAHPVYCCPLREREPLLRLSKSALVT 139

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                               +G+ + V++IH  +F     + +             + L 
Sbjct: 140 VYPIH---------------DGRLLMVVNIHAVNFSLGVDVYS-------------KQLD 171

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
               Q      P ++AGDFN          +  +    +  L       D     +++  
Sbjct: 172 PIGDQIASHRGPVILAGDFNAW---SRQRINALQHFAQDAGLQEVEFRVD-----HRSRA 223

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              P+D+                        D      R SDH P+ +++
Sbjct: 224 FGRPLDFIFYRG---------------LTVIDASVLVTRASDHNPLIVEF 258


>gi|51597284|ref|YP_071475.1| hypothetical protein YPTB2969 [Yersinia pseudotuberculosis IP
           32953]
 gi|108806552|ref|YP_650468.1| hypothetical protein YPA_0555 [Yersinia pestis Antiqua]
 gi|108813081|ref|YP_648848.1| hypothetical protein YPN_2921 [Yersinia pestis Nepal516]
 gi|145598917|ref|YP_001162993.1| hypothetical protein YPDSF_1635 [Yersinia pestis Pestoides F]
 gi|162418419|ref|YP_001607088.1| hypothetical protein YpAngola_A2687 [Yersinia pestis Angola]
 gi|165924486|ref|ZP_02220318.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Orientalis str. F1991016]
 gi|165938315|ref|ZP_02226873.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Orientalis str. IP275]
 gi|166011978|ref|ZP_02232876.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Antiqua str. E1979001]
 gi|166211717|ref|ZP_02237752.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Antiqua str. B42003004]
 gi|167419440|ref|ZP_02311193.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|167424233|ref|ZP_02315986.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Mediaevalis str. K1973002]
 gi|167470216|ref|ZP_02334920.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis FV-1]
 gi|170023350|ref|YP_001719855.1| hypothetical protein YPK_1104 [Yersinia pseudotuberculosis YPIII]
 gi|186896389|ref|YP_001873501.1| hypothetical protein YPTS_3087 [Yersinia pseudotuberculosis PB1/+]
 gi|229895469|ref|ZP_04510641.1| hypothetical protein YPS_3256 [Yersinia pestis Pestoides A]
 gi|270487305|ref|ZP_06204379.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis KIM D27]
 gi|294503093|ref|YP_003567155.1| hypothetical protein YPZ3_0983 [Yersinia pestis Z176003]
 gi|51590566|emb|CAH22207.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108776729|gb|ABG19248.1| hypothetical protein YPN_2921 [Yersinia pestis Nepal516]
 gi|108778465|gb|ABG12523.1| hypothetical protein YPA_0555 [Yersinia pestis Antiqua]
 gi|145210613|gb|ABP40020.1| hypothetical protein YPDSF_1635 [Yersinia pestis Pestoides F]
 gi|162351234|gb|ABX85182.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis Angola]
 gi|165913693|gb|EDR32312.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Orientalis str. IP275]
 gi|165923546|gb|EDR40678.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Orientalis str. F1991016]
 gi|165989145|gb|EDR41446.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Antiqua str. E1979001]
 gi|166207488|gb|EDR51968.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Antiqua str. B42003004]
 gi|166962181|gb|EDR58202.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|167057082|gb|EDR66845.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis biovar Mediaevalis str. K1973002]
 gi|169749884|gb|ACA67402.1| Endonuclease/exonuclease/phosphatase [Yersinia pseudotuberculosis
           YPIII]
 gi|186699415|gb|ACC90044.1| Endonuclease/exonuclease/phosphatase [Yersinia pseudotuberculosis
           PB1/+]
 gi|229701624|gb|EEO89651.1| hypothetical protein YPS_3256 [Yersinia pestis Pestoides A]
 gi|262361130|gb|ACY57851.1| hypothetical protein YPD4_0942 [Yersinia pestis D106004]
 gi|262365372|gb|ACY61929.1| hypothetical protein YPD8_1244 [Yersinia pestis D182038]
 gi|270335809|gb|EFA46586.1| endonuclease/exonuclease/phosphatase family protein [Yersinia
           pestis KIM D27]
 gi|294353552|gb|ADE63893.1| hypothetical protein YPZ3_0983 [Yersinia pestis Z176003]
          Length = 253

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 79/290 (27%), Gaps = 75/290 (25%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMGS 76
             A+ +R+V WNI                              K L  D  ++ LQE  +
Sbjct: 31  PTAELLRVVVWNI------------------FKQQRAGWLPVLKELGRDTQLMLLQEAQT 72

Query: 77  YNAVAKVFPKNTWCI----FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
              + +    +         +S  +  +     +         +R++   +      L+ 
Sbjct: 73  TPELVRFATASYQAADQVPAFSLPQHPSGVMTLAAAHPVYCCPLREREPLLRLSKSALVT 132

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                               +G+ + V++IH  +F     + +             + L 
Sbjct: 133 VYPIH---------------DGRLLMVVNIHAVNFSLGVDVYS-------------KQLD 164

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
               Q      P ++AGDFN          +  +    +  L       D     +++  
Sbjct: 165 PIGDQIASHRGPVILAGDFNAW---SRQRINALQHFAQDAGLQEVEFRVD-----HRSRA 216

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              P+D+                        D      R SDH P+ +++
Sbjct: 217 FGRPLDFIFYRG---------------LTVIDASVLVTRASDHNPLIVEF 251


>gi|126661378|ref|ZP_01732441.1| hypothetical protein CY0110_31000 [Cyanothece sp. CCY0110]
 gi|126617336|gb|EAZ88142.1| hypothetical protein CY0110_31000 [Cyanothece sp. CCY0110]
          Length = 343

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 75/306 (24%), Gaps = 55/306 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +  V+WN+          L   +V R   D   +         D++ + E  S +  A  
Sbjct: 25  LTFVNWNVANRPNNSSQRLDMETVFR---DIGRV---------DLLLVAETDSSSTFATR 72

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              N     ++T      +         T +      + ++  S    G      R   R
Sbjct: 73  TALNN---AFNTSSYRFRTASADGGGDRTGLFYNSSTLSLVGVSQLTSGLIHPTLRGLFR 129

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +         +   +HLKS           S +  + +                  
Sbjct: 130 P---VGASSTATDFYAYAVHLKSGSSNSDENIRASEASIIRN----------NANTLGNR 176

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--------IRFPKEKDSRCNANKNLR-NK 254
             +  GDFN   +   +   +                           R + N       
Sbjct: 177 NIIYGGDFNWNSSSEASPSAYNVFTSSGAGQAFSFFSGGNWRDNSSFLRFHTNSPRGAMD 236

Query: 255 IPIDYFVMDQNAYK------------------FLIQESFSEILYNEDDIKSRGKRLSDHC 296
              D  ++    +                    L+ +  +        + S   R SDH 
Sbjct: 237 DLFDTQLVSSELFDGFGLEITGGYSVLGNNGSHLLNQPITTGNGASASVLSALSRFSDHL 296

Query: 297 PISIDY 302
           P+ +DY
Sbjct: 297 PVVVDY 302


>gi|292898571|ref|YP_003537940.1| endonuclease/exonuclease/phosphatase [Erwinia amylovora ATCC 49946]
 gi|291198419|emb|CBJ45526.1| putative endonuclease/exonuclease/phosphatase [Erwinia amylovora
           ATCC 49946]
          Length = 268

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 88/286 (30%), Gaps = 63/286 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +   +++++ WNI                K+  +D+  + Q     +A +V LQE  +  
Sbjct: 39  TDGTRLKVLVWNIF---------------KQQRADWLSVLQDFGK-NAHLVLLQEAQTTP 82

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + + F  N + +       +          + +A A+        ++    L       
Sbjct: 83  ELVR-FATNNYLVADQVPAFVLPQHPSGVMTLASAHAIYCC-PLREREPLLRLSKS---- 136

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  V      N + + V++IH  +F     + +             + L     Q 
Sbjct: 137 -----ALVTAYPLPNDQVLMVVNIHAVNFSLGIDVYS-------------KQLGPIGEQI 178

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P ++AGDFN   +    N  +    +     +RF  +   +            +D
Sbjct: 179 IHHQGPVIMAGDFNAW-SRQRINALYRFAREMGLREVRFTDDHRRKAFGRP-------LD 230

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                     +  +      R SDH P+ ++++F
Sbjct: 231 FIFYRG---------------MDVTEASVLVTRASDHNPLLVEFNF 261


>gi|124485534|ref|YP_001030150.1| hypothetical protein Mlab_0711 [Methanocorpusculum labreanum Z]
 gi|124363075|gb|ABN06883.1| Endonuclease/exonuclease/phosphatase [Methanocorpusculum labreanum
           Z]
          Length = 256

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 80/296 (27%), Gaps = 79/296 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++++WN                      ++    +Y +  +ADI+ +QE  S + +   
Sbjct: 23  MKIITWN-------------------CGGNFRKKFRYIEKYNADILVIQECESIDKIQSA 63

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                           +             + +  K   V ++        + +      
Sbjct: 64  NQTIVIKYNVEWINDGS-------QRTDKGLGIFLKKGVVFKKQNWETFGLNHY------ 110

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + + +E    K  ++ I  ++  ++                    L+ +         
Sbjct: 111 --LAVKIE---NKFDLIGIWTENPGYIRDACVY--------------LQMYEKLFTNKSE 151

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------------ 251
             ++ GD N             KT +      +  +     C                  
Sbjct: 152 NVLLCGDLNSFKKD----KYTSKTKNIETYFKKLYEMNIHSCYHYTYDKELGDKEELKTF 207

Query: 252 ----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                 +  IDY   +     F I         + D+ K  GK +SDH P+ ++ D
Sbjct: 208 ISPNGKRYHIDYIFTNMEYSGFFID--------DFDNFKVSGKNISDHVPLGVNLD 255


>gi|52424927|ref|YP_088064.1| hypothetical protein MS0872 [Mannheimia succiniciproducens MBEL55E]
 gi|52306979|gb|AAU37479.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 288

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 93/282 (32%), Gaps = 68/282 (24%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            + + V WNI+           K   +          Q     +AD + LQE+ S   +A
Sbjct: 64  NRFKFVVWNIH-----------KGLDEGWQQSLQQFAQ-----EADFLLLQEVASTQQLA 107

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +  P+ +  ++ ++          S     + +++  K +          GA+       
Sbjct: 108 QEIPQFSTALYVTS---------FSYLGRESGVSILAKTMP----QRICGGAEKEPWILI 154

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +    +   + NG+ + V+++HL +F F  +                  L++ +    +
Sbjct: 155 PKVGNAMTFPLQNGQSLLVVNLHLVNFEFHPTSYRN-------------QLENMMRLVAK 201

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-KIPIDY 259
              P ++AGDFN               ++      +  +  +   + ++ LR    P+D+
Sbjct: 202 HQGPIILAGDFN---------SWNQPRLNLVRRFAKQYQLNEVNYHPDERLRFLTNPLDH 252

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +             + I        S      DH PI ++
Sbjct: 253 VFVRG----------LNVITSTTVKTSSS-----DHNPIFVE 279


>gi|193785691|dbj|BAG51126.1| unnamed protein product [Homo sapiens]
          Length = 749

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 96  TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 153

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 154 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 213

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 214 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 273

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 274 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 333

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 334 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 381

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 382 TSDHKPVSSVFD 393


>gi|119627712|gb|EAX07307.1| inositol polyphosphate-5-phosphatase, 75kDa, isoform CRA_a [Homo
           sapiens]
          Length = 749

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 96  TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 153

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 154 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 213

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 214 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 273

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 274 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 333

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 334 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 381

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 382 TSDHKPVSSVFD 393


>gi|55665967|emb|CAH69926.1| inositol polyphosphate-5-phosphatase, 75kDa [Homo sapiens]
 gi|55666457|emb|CAH70076.1| inositol polyphosphate-5-phosphatase, 75kDa [Homo sapiens]
          Length = 749

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 96  TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 153

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 154 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 213

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 214 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 273

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 274 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 333

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 334 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 381

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 382 TSDHKPVSSVFD 393


>gi|156392233|ref|XP_001635953.1| predicted protein [Nematostella vectensis]
 gi|156223052|gb|EDO43890.1| predicted protein [Nematostella vectensis]
          Length = 329

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/271 (9%), Positives = 66/271 (24%), Gaps = 50/271 (18%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAK---------VFPKNTWCIFY-STERLINHSKRDSNND 109
             +   AD++  QE+ S  +  K         + P+  +  ++  T        +     
Sbjct: 1   MIRQSKADVIGFQEVRSDLSDKKNQIRELQSLLGPEYKYSSYHPVTTVTPPLGAQGPPGW 60

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169
               +    K+  +L      L           R  +   + I G ++ +  +H      
Sbjct: 61  EQEGLGFISKHPIMLSS-NMELKISQLNPDKNKRVLLHTRLNIQGVELDLTLVHFSY--- 116

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF----- 224
                                +   +    +     V+ GDFN   ++            
Sbjct: 117 ---------DKQQQCQNAVDLISHLVALHSKRS---VVLGDFNVYADFPWPMAAIESGRF 164

Query: 225 --------------WKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKF 269
                          +T    D        ++    +N          D  ++ +N    
Sbjct: 165 PKRSACGPGSYLKAGRTYAYVDVWNAVNHGREGYTFSNMPTPGLVSRPDRILVSRNGLAV 224

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  ++      +             H  +++
Sbjct: 225 IKADTIGGHYMSAYYHALNKW----HRLVTV 251


>gi|260866352|ref|YP_003232754.1| hypothetical protein ECO111_0206 [Escherichia coli O111:H- str.
           11128]
 gi|257762708|dbj|BAI34203.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
          Length = 266

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 95/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 25  FASIGLALPPGEPLSTEERIRILVWNIY--------------KQQRAEWLSVLKNYGK-- 68

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 69  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V++IH  +F     + +     
Sbjct: 114 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYS----- 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 169 --------KQLLPIGDQIAHHSGPVIMAGDFNAW-SRRRMNALYRFAREMSLRQVRFTDD 219

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N  +      R SDH P+ +
Sbjct: 220 QRRRAFGRP-------LDFVFYRG---------------LNVSEASVLVTRASDHNPLLV 257

Query: 301 DYD 303
           ++ 
Sbjct: 258 EFS 260


>gi|227824183|ref|YP_002828156.1| hypothetical protein associated with
           endonuclease/exonuclease/phosphatase [Sinorhizobium
           fredii NGR234]
 gi|227343185|gb|ACP27403.1| hypothetical protein associated with
           endonuclease/exonuclease/phosphatase [Sinorhizobium
           fredii NGR234]
          Length = 306

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 88/317 (27%), Gaps = 67/317 (21%)

Query: 15  PCTASVAQKVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
             + ++A    + +WN+   L  +E                       +   A +V L E
Sbjct: 26  SASGALAFPFTVAAWNLERCLFPEES------------------ADQVRATGASLVLLSE 67

Query: 74  MGS-----------YNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIA-- 115
           M +               A +  +  + + +    L + ++R     D N       A  
Sbjct: 68  MDNGMARTGQRHTTAEVAAGLAMQFAYGVEFVELGLGSDTEREFCRDDFNEKGFHGNALL 127

Query: 116 ----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
               +R+  +  L              R G R AV  ++         +  HL+S     
Sbjct: 128 ASTPLRRPFLLRLWGERLWFMDGGDQPRLGERCAVGAVIGTEAGPFVAVSTHLESATT-- 185

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTID 229
                     +   +Q   L D +       +P +I GD N   +  G+ +    +    
Sbjct: 186 ---------AAYRERQVGALIDALD-VAFPGLPILIGGDLNTGNHVGGDFEAEGLFAASA 235

Query: 230 PNDSLIRFPKEKDSRCNA---NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                                 +  +  + +D+F+                       + 
Sbjct: 236 ARGFTRHGGPIDRMTTRPSLITRWPKRAMKLDWFLARGLRIG---------ESRIISSLD 286

Query: 287 SRGKRLSDHCPISIDYD 303
           + G+ LSDH  ++   +
Sbjct: 287 ASGRPLSDHDLVTCVVE 303


>gi|323176521|gb|EFZ62113.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 1180]
          Length = 259

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 95/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 18  FASIGLALPPGEPLSTEERIRILVWNIY--------------KQQRAEWLSVLKNYGK-- 61

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 62  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 106

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V++IH  +F     + +     
Sbjct: 107 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYS----- 161

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 162 --------KQLLPIGDQIAHHSGPVIMAGDFNAW-SRRRMNALYRFAREMSLRQVRFTDD 212

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N  +      R SDH P+ +
Sbjct: 213 QRRRAFGRP-------LDFVFYRG---------------LNVSEASVLVTRASDHNPLLV 250

Query: 301 DYD 303
           ++ 
Sbjct: 251 EFS 253


>gi|257457051|ref|ZP_05622229.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           vincentii ATCC 35580]
 gi|257445525|gb|EEV20590.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           vincentii ATCC 35580]
          Length = 350

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 103/346 (29%), Gaps = 74/346 (21%)

Query: 3   RKYVLA--LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           ++++L   ++  L+      A+++ + SWNI      E                     +
Sbjct: 30  KRFLLICGMLCVLLTVF---AEEIVIGSWNIRGNGHFE-----------EQEIIQFGTYF 75

Query: 61  AKNLDADIVFLQEM-----------------GSYNAVAKVFP------KNTWCIFYSTER 97
             N   D++ LQE+                  S N + +            W    S E 
Sbjct: 76  VTNKSLDVLALQEVKLELLPKPGANDIYKTIDSNNFLERFAQTLSKQTGTIWKFTSSAEY 135

Query: 98  LINH---SKRDSNNDIHTAIAVRKKNVRVLQ----QSYPLLGAKDSFSRAGNRRAVELLV 150
            I          N  +  A+  R   + V        +     + S  +        L +
Sbjct: 136 AIRKNIDEYTYCNKGLDNAVLYRADKLTVQDLYSGHPFYFDNFEKSNYKTNMNNTNVLKI 195

Query: 151 E-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
           + ++   ++ L      F        ++     +L +  Q L        +S  P +I G
Sbjct: 196 KNVSETSVFYLINKHMPFKSKQKGWGSWDRDIQVLYRMYQIL--------DSNAPIIICG 247

Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
           DFN   +          TI  +  +        S    N   R     D+F+++  A + 
Sbjct: 248 DFNGDASE-------LGTIFSDCFVGCRKPTSISTSIFNSAARYAHEYDHFILNIAATQQ 300

Query: 270 LIQESFSEIL------------YNEDDIKSRGKRLSDHCPISIDYD 303
           ++ E                  +    ++   + +SDH PI +  D
Sbjct: 301 VVNEPSRYTSDPDIVTGQIRYGHKSTTLEYFYEHISDHVPIFMSID 346


>gi|34782991|gb|AAH42529.2| INPP5B protein [Homo sapiens]
          Length = 736

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 83  TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 140

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 141 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 200

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 201 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 260

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 261 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 320

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 321 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 368

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 369 TSDHKPVSSVFD 380


>gi|3786346|gb|AAC70898.1| cytolethal distending toxin protein B [Aggregatibacter
           actinomycetemcomitans]
          Length = 283

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 83/304 (27%), Gaps = 46/304 (15%)

Query: 8   ALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65
            +   ++   +S A     ++ +WN+   S         N           +RQ      
Sbjct: 9   VVFCTMLFSFSSYANLSDFKVATWNLQGSSAVNESKWNIN-----------VRQLLSGEQ 57

Query: 66  -ADIVFLQEM---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            ADI+ +QE           S        P   +     T    N      +     A  
Sbjct: 58  GADILMVQEAGSLPSSAVRTSRVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANR 117

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           V    V   Q     +   DS     +R AV + +   G  ++     L +         
Sbjct: 118 VNLAIVSRRQADEAFIVHSDSSV-LQSRPAVGIRI---GTDVFFTVHALATGGSD----- 168

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
               + SL+           +  +     +++ GDFNR    L         +  N  +I
Sbjct: 169 ----AVSLIRNIFTTFTSSPSSPERRGYSWMVVGDFNRAPVNLEAALRQEPAVSENTIII 224

Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
              +            ++   +DY ++         Q           +        SDH
Sbjct: 225 APTE---------PTHQSGNILDYAILHDAHLPRREQVRERIGASLMLNQLRSQIT-SDH 274

Query: 296 CPIS 299
            P+S
Sbjct: 275 FPVS 278


>gi|309810408|ref|ZP_07704242.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus
           sp. Ellin185]
 gi|308435648|gb|EFP59446.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus
           sp. Ellin185]
          Length = 387

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 70/288 (24%), Gaps = 62/288 (21%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A+  + +R+++ N+       G    + +  R                 D+V + E    
Sbjct: 161 AAGQRHLRVLALNLEFGGADAGAVAAEVARVR----------------PDVVVMPETT-- 202

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                              RL   +    ++      AV  +           LG  D  
Sbjct: 203 -----AVKLRLLDAAGLGGRLPYRASGLVDDGSR-GTAVLSRYPLHTLDDGRHLGPYDLQ 256

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                     + V   G  + V  +H                  +    Q + L  W  Q
Sbjct: 257 MP-------IVTVAAPGADVTVHGVHTYPPL---------QDGANHWRPQLEALGRW--Q 298

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-IP 256
           + E+    V+AGDFN    +          ID                     +      
Sbjct: 299 RGENAPHLVMAGDFNASTAHPAFRHLADGLID----AFPAQHGNWPPTWPQDAVVPPFAQ 354

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           ID+ +                  +   D  +     +DH  +  D  +
Sbjct: 355 IDHILTRG---------------FVPVDAGTFTVPGTDHAGVWSDLRY 387


>gi|332184870|gb|AEE27124.1| hypothetical protein FN3523_1821 [Francisella cf. novicida 3523]
          Length = 239

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 95/283 (33%), Gaps = 56/283 (19%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            ++K  L+SWN            +K   K T +    +R    N + DI  LQE    + 
Sbjct: 10  ASKKFCLMSWN-----------SYKIDYKDTETFKAYIRHTYFNYNVDIFCLQEAVHQHD 58

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
               FP + + I +++               +  +A       +  ++  +L        
Sbjct: 59  TK--FPIDKFDINFASN--------IVLRSHNYGVATVSHFPVI--KNVKILTTHRESVI 106

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
             ++ ++   + IN  K+ V++IH  +F            S  +   + + +K++I   +
Sbjct: 107 NTHKASLITHLNINNTKVIVVNIHAINF-----------KSNKVYEYEFEKIKEFIA-PE 154

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
           +   P +IAGDFN    +        K             ++     + +N      +D+
Sbjct: 155 KYKHPIIIAGDFN---TWNRKRVKLIKDFCREFCFKVAFIDEPQLVKSFQN----NHLDF 207

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +      +                      ++SDH PI  ++
Sbjct: 208 VLYRGLNLEKAAVLDCK--------------KISDHNPIIAEF 236


>gi|92111133|gb|ABE73458.1| endonuclease/reverse transcriptase [Pan troglodytes]
          Length = 1275

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/282 (8%), Positives = 69/282 (24%), Gaps = 63/282 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ N++ L+                     L  + K+ D  +  +QE          
Sbjct: 8   ITILTLNVSGLNSP--------------IKRHRLASWIKSQDPSVCCIQET--------- 44

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                        +      + +       +A+                  +        
Sbjct: 45  -HLTCRDTHRLKIKGWRKIHQANGKQKKAGVAIL-------VSDKTDFKPTNIKRDKEGH 96

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ +L+I+  +                 + Q    L+  +        
Sbjct: 97  YIM-VKGSIQQEELTILNIYAPNTGAP-----------RFIKQVLSDLQRDLDSH----- 139

Query: 204 PFVIAGDFNRKI-------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I GDFN  +             +    N    +    +      PK  +    +  +
Sbjct: 140 -TLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQEDLIDIYRTLHPKSTEYTFFSAPH 198

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
                 ID+ V  +       +       +++        R+
Sbjct: 199 HTY-SKIDHIVGSKALLSKCKRTEILINYHSDHTAIKLEHRI 239


>gi|303282399|ref|XP_003060491.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457962|gb|EEH55260.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 514

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/85 (10%), Positives = 26/85 (30%), Gaps = 5/85 (5%)

Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE-----SFSE 277
           D ++ +  +                 +     + +DYF +     +  ++      ++S+
Sbjct: 218 DVYRHLHGDARRACTWYGHPGVVATGRYKGRGMRLDYFFVSDGLERAAVECAQATDAYSD 277

Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302
                +         SDHC + +  
Sbjct: 278 KPAALEQRPDDAFFGSDHCGVYLKL 302


>gi|149023907|gb|EDL80404.1| inositol polyphosphate-5-phosphatase B [Rattus norvegicus]
          Length = 813

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 81/317 (25%), Gaps = 67/317 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +S  +                 D+  V  QE+         
Sbjct: 169 VGTYNVNGQSPKECLRPWLSSDTKA---------------PDVYCVGFQELDLSKEAFFF 213

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 214 HDTPKEEEWFKAVSESLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 273

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q +Q       
Sbjct: 274 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFSQVDPSLPP 333

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE---------------- 240
                    +  GD N +I  L       K ++       +  +                
Sbjct: 334 LTISKHDVILWLGDLNYRIEELDVEK-VKKLVEEKAFHTLYAHDQLKIQVAAKTVFEGFT 392

Query: 241 ----KDSRCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                                    R     D  +           ++ S++ Y      
Sbjct: 393 EGEITFQPTYKYDTGSDNWDTSEKCRAPAWCDRVLWRG--------KNISQLSYQSHMSL 444

Query: 287 SRGKRLSDHCPISIDYD 303
                 SDH P+S  ++
Sbjct: 445 KT----SDHKPVSSVFE 457


>gi|317033920|ref|XP_003188868.1| hypothetical protein ANI_1_1918104 [Aspergillus niger CBS 513.88]
          Length = 321

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 86/299 (28%), Gaps = 53/299 (17%)

Query: 15  PCTASVAQKVR---LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIV 69
           P   + +  +    L++WNI              +  +T    T +      LD   DI+
Sbjct: 54  PADPAGSGDISRLVLLTWNI------------DATSPQTEKRVTEIITCIIGLDPRVDII 101

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
           FLQE+        +  +    ++ S+E         S      A+ +     R    +  
Sbjct: 102 FLQEVSKPALQQILKDERVRELWLSSECDDTSWGDQSF-----AVMILLSKARFTTNAAI 156

Query: 130 LLGAKDSFSRAGNRRAVELLVEING------KKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
               +  F     R A+   + +         +I ++++HL S     S         + 
Sbjct: 157 GPIWRVKFPSHFARDALCCDIFVPSPKEPKPARIRLVNVHLDSLPIKPSHRPKQVSIATS 216

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243
           L + A                 ++AGDF+  ++     +   +     D+      E+  
Sbjct: 217 LLRVAGQ--------------GLVAGDFDPVLDED---NGLLEKNGLVDAWATLRPEEPG 259

Query: 244 RCNA--NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHCPIS 299
                  K       +D           L       +        S  + L SDH  + 
Sbjct: 260 FTWGLDGKQPFPPNRLDKI-----GILRLRSHEIKTLEPKPISGSSDDEPLWSDHHALI 313


>gi|115314043|ref|YP_762766.1| hypothetical protein FTH_0081 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134301188|ref|YP_001121156.1| hypothetical protein FTW_0026 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|156501464|ref|YP_001427529.1| hypothetical protein FTA_0095 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|187930969|ref|YP_001890953.1| hypothetical protein FTM_0069 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|254368506|ref|ZP_04984523.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290954287|ref|ZP_06558908.1| hypothetical protein FtulhU_08682 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312294|ref|ZP_06803084.1| hypothetical protein FtulhU_08669 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|115128942|gb|ABI82129.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134048965|gb|ABO46036.1| endonuclease/exonuclease/phosphatase family protein [Francisella
           tularensis subsp. tularensis WY96-3418]
 gi|156252067|gb|ABU60573.1| endonuclease/exonuclease/phosphatase family protein [Francisella
           tularensis subsp. holarctica FTNF002-00]
 gi|157121400|gb|EDO65601.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|187711878|gb|ACD30175.1| endonuclease/exonuclease/phosphatase family [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 239

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 97/282 (34%), Gaps = 56/282 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++K  L+SWN            +K   K + +    +R    N + DI  LQE   ++  
Sbjct: 11  SKKFCLMSWN-----------SYKIDHKDSETFSAYIRHVYFNYNIDIFCLQEAVHHHGS 59

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              FP + + I +++  ++           H  +    K +   ++S             
Sbjct: 60  K--FPIDKFDINFASNIVLRSHNYGVATVSHYPVIKNVKILTTHRESVINTH-------- 109

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             + ++   + IN  K+ V++IH  +F            S  +   + + +K++I   ++
Sbjct: 110 --KASLITHLNINNTKVIVVNIHAINF-----------KSNKVYEYEFEKIKEFIA-PEK 155

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P +IAGDFN    +        K             ++     + +N      +D+ 
Sbjct: 156 YKHPIIIAGDFN---TWNRKRVKLIKDFCREFCFKVAFIDEPQLVKSFQN----NHLDFV 208

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    + +                      ++SDH PI  ++
Sbjct: 209 LYRGLSLEKAAVLDCK--------------KISDHNPIIAEF 236


>gi|153840026|ref|ZP_01992693.1| nuclease [Vibrio parahaemolyticus AQ3810]
 gi|149746424|gb|EDM57445.1| nuclease [Vibrio parahaemolyticus AQ3810]
          Length = 602

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 23/131 (17%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT---------SDYTLLRQYAKNLD 65
              A     +R+ S+N+         S   N   +                +      +D
Sbjct: 466 AAPAIAESDLRVASFNVLNYFTSVADSGNNNPTGQNRGATNHDEFLIQQAKIVSAMNKMD 525

Query: 66  ADIVFLQEMGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDSNNDIH 111
           ADI+ L E+ +      +AV  +            + +      ++     +   ++ I 
Sbjct: 526 ADIIGLMEVENNGFGDGSAVQNLVDALNAEIDDADDHYTYVEIADKDKYQEEYFGSDAIM 585

Query: 112 TAIAVRKKNVR 122
            AI  R K V 
Sbjct: 586 VAILYRAKVVT 596


>gi|256374492|ref|YP_003098152.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
           43827]
 gi|255918795|gb|ACU34306.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
           43827]
          Length = 323

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/227 (10%), Positives = 57/227 (25%), Gaps = 43/227 (18%)

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           A+ ++ P     +  +    +   +   +    +   +  +           L       
Sbjct: 133 AMQELSPAMVRDLENAGLDAVLPHRAFEDEPGGSGSGIASRYP---------LTPARLVG 183

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            +  R+A  ++   NGK + V+ +H                               +  +
Sbjct: 184 PSSFRQASAVVELPNGKDVEVVSVHPMPPVEPQGPAQWRRD------------LAALPPR 231

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR---NKI 255
                  V+AGDFN  +++          +          +          N       +
Sbjct: 232 NADGPIRVLAGDFNATLDHAPLRR-----LLDTGYADAADRVGAGLTPTWPNEGVVPPLV 286

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +D+ ++D                   D   +     SDH  +   +
Sbjct: 287 ALDHVLVDDR--------------CPVDWFTAVDVPGSDHRAVVAQF 319


>gi|224118024|ref|XP_002317714.1| predicted protein [Populus trichocarpa]
 gi|222858387|gb|EEE95934.1| predicted protein [Populus trichocarpa]
          Length = 399

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/335 (11%), Positives = 89/335 (26%), Gaps = 72/335 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----------- 74
           + +WN+  ++  + +++      RT              D  ++  QE+           
Sbjct: 64  VGTWNVGGIAPPDDLNMEDWLCTRTEP-----------ADIYVLGFQEVVPLSAGNVVPG 112

Query: 75  ---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN----------NDIHTAIA 115
                     +      +    +     S+  L   S    +            I   I 
Sbjct: 113 FENSKICTKWNSLIREALNNSTSKPKNRSSNSLGKSSNIFPHCFDCIISKQMVGIFITIW 172

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           VR   +  +QQ+             GN+ +V +   ++   +  +  HL S       ++
Sbjct: 173 VRGDLLPYIQQASVSCVGCGIMGCLGNKGSVSVRFCLHETSLCFVCSHLASGGKEGDEKS 232

Query: 176 TYSPSCSL--LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-------------- 219
             + +  +   ++ ++     + +K       +  GD N +I                  
Sbjct: 233 RNADATEILSRTRFSRGPLRNLPRKILDHDQVIWLGDLNYRIYLPDTKTRYLVQKKEWNI 292

Query: 220 --NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD---------QNAYK 268
               D     +        + + K       K  +N                   + A  
Sbjct: 293 MLEKDQLKAELMEGHVFQGWNEGKIEFAPTYKYYQNSQ----VYYGCDQKRKGEKKRAPA 348

Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +  +  +      +        RLSDH P+   + 
Sbjct: 349 WCDRIIWFGKGLKQKQYSRGESRLSDHRPVRAIFT 383


>gi|164565437|ref|NP_001106843.1| synaptojanin-2 isoform 2 [Rattus norvegicus]
          Length = 1451

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 553 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 612

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 613 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 672

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 673 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 726

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 727 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 786

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 787 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 846

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 847 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 877


>gi|164565435|ref|NP_001106842.1| synaptojanin-2 isoform 1 [Rattus norvegicus]
          Length = 1496

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 553 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 612

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 613 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 672

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 673 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 726

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 727 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 786

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 787 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 846

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 847 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 877


>gi|149028314|gb|EDL83730.1| synaptojanin 2, isoform CRA_d [Rattus norvegicus]
          Length = 1239

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 296 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 355

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 356 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 415

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 416 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 469

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 470 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 529

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 530 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 589

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 590 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 620


>gi|149028312|gb|EDL83728.1| synaptojanin 2, isoform CRA_b [Rattus norvegicus]
          Length = 1248

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 553 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 612

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 613 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 672

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 673 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 726

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 727 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 786

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 787 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 846

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 847 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 877


>gi|149028315|gb|EDL83731.1| synaptojanin 2, isoform CRA_e [Rattus norvegicus]
          Length = 1479

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 536 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 595

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 596 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 655

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 656 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 709

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 710 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 769

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 770 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 829

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 830 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 860


>gi|149028313|gb|EDL83729.1| synaptojanin 2, isoform CRA_c [Rattus norvegicus]
          Length = 1496

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 553 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 612

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 613 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 672

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 673 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 726

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 727 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 786

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 787 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 846

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 847 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 877


>gi|149028311|gb|EDL83727.1| synaptojanin 2, isoform CRA_a [Rattus norvegicus]
          Length = 1061

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 296 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 355

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 356 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 415

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 416 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 469

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 470 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 529

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 530 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 589

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 590 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 620


>gi|149028316|gb|EDL83732.1| synaptojanin 2, isoform CRA_f [Rattus norvegicus]
          Length = 1451

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 553 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 612

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 613 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 672

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 673 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 726

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 727 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 786

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 787 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 846

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 847 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 877


>gi|147835479|emb|CAN72819.1| hypothetical protein VITISV_012036 [Vitis vinifera]
          Length = 818

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  +     +           F + +D    +    + ++   N   N +
Sbjct: 701 EDPWCLGGDFNITLFQKERSSQRRINSAMRRFAEIVDDLGLVDLPLQGEEFTWNGGLNNQ 760

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               +D F+M  +              ++        + +SDH PI ++
Sbjct: 761 AWARLDKFLMSPS----------WLDQFSGVTQSRLSRPISDHFPIVLE 799


>gi|16647984|gb|AAK61722.1| synaptojanin 2B1 [Rattus norvegicus]
          Length = 1451

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 553 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 612

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 613 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 672

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 673 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 726

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 727 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 786

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 787 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 846

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 847 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 877


>gi|3478621|gb|AAC33137.1| synaptojanin 2 [Mus musculus]
          Length = 1206

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 511 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 570

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 571 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 630

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 631 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 684

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 685 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 744

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 745 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 804

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 805 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 835


>gi|14091758|ref|NP_114460.1| synaptojanin-2 isoform 3 [Rattus norvegicus]
 gi|2708493|gb|AAB92481.1| synaptojanin II [Rattus norvegicus]
          Length = 1248

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 553 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 612

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 613 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 672

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 673 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 726

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 727 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 786

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 787 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 846

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 847 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 877


>gi|60416379|sp|O55207|SYNJ2_RAT RecName: Full=Synaptojanin-2; AltName: Full=Synaptic
           inositol-1,4,5-trisphosphate 5-phosphatase 2
 gi|16647986|gb|AAK61723.1| synaptojanin 2B2 [Rattus norvegicus]
          Length = 1496

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 83/331 (25%), Gaps = 64/331 (19%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD----ADI--VFLQEMGSYNAVA 81
           +WN+N   +     L    +     D   L     + D    ADI  V  +EM   +A  
Sbjct: 553 TWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAVGFEEMVELSAGN 612

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQSYPLLGA 133
            V    T    +  +     S+      + +A        I VR  +V  ++        
Sbjct: 613 IVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVK 672

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                +AGN+ AV +  + +      +  HL +        N      +        L  
Sbjct: 673 TGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHK------LSF 726

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTI----------DPNDSLIRF 237
              +   S       GDFN +I+              WK +                  F
Sbjct: 727 PSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDF 786

Query: 238 PKEKDSRCNANKNL------------RNKIPIDYF-VMDQNAYKFLIQESFSEILYNED- 283
            +   +     K              R     D      +           + +  + D 
Sbjct: 787 HEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDG 846

Query: 284 --------------DIKSRGKRLSDHCPISI 300
                                + SDH P+  
Sbjct: 847 DANIRHTWSPGTLKYYGRAELQASDHRPVLA 877


>gi|149377227|ref|ZP_01894975.1| hypothetical protein MDG893_16202 [Marinobacter algicola DG893]
 gi|149358526|gb|EDM47000.1| hypothetical protein MDG893_16202 [Marinobacter algicola DG893]
          Length = 354

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 61/251 (24%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            +   L +  +    D++   E   +           W                   D  
Sbjct: 112 RNSEGLIRQVQEHRPDVLLTLESDQWWGDQLDAAFGDWPTII-----------RVPLDNL 160

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   L+           R         +G ++ +  +H +     +
Sbjct: 161 YGMHLYSRLPLEEAEVSYLIQDDIPSIHGWLRLP-------SGDRVKLHAVHPRPPAPSE 213

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           S E+ +  +  LL  Q         Q      P ++AGD N              +    
Sbjct: 214 SEESLWRDAELLLIGQ---------QIHNDDYPAIVAGDLNDVAWSRTTRLFCRVS---- 260

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L              +    + P+D+    ++              +    I+     
Sbjct: 261 GMLDPRRGRGMFNSFHAERWYLRWPLDHVFTTEH--------------FTLGRIERLAPF 306

Query: 292 LSDHCPISIDY 302
            SDH PI    
Sbjct: 307 GSDHFPILTTL 317


>gi|317490803|ref|ZP_07949239.1| endonuclease/Exonuclease/phosphatase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920350|gb|EFV41673.1| endonuclease/Exonuclease/phosphatase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 261

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 90/295 (30%), Gaps = 71/295 (24%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
             V  +      +R++ WNI                ++ +   ++L++Y K+    +V L
Sbjct: 31  LPVTQSLPTDNVLRIMVWNIF--------------KQQRSDWLSVLKEYGKSSQ--LVLL 74

Query: 72  QEMGSYNAVAKVFPKNT----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           QE  +   + K    N         +S  +  +     +         +R+K   +    
Sbjct: 75  QEAQTTPELVKFATSNYLTADQVPAFSFPQHPSGVMTLAAAHPVYCCPLREKEPLIRLSK 134

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
             L+     F               +G+ + V++IH  +F     + +            
Sbjct: 135 SALVTVYPLF---------------DGRLLMVVNIHAVNFSLGVDVYS------------ 167

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + L     Q      P ++AGDFN             +             ++ +  N 
Sbjct: 168 -KQLDPIGEQIALHKGPVIMAGDFNAWSK--------QRINALQRFASGMELQEVNFTND 218

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           ++      P+D+          +++ S                + SDH P+ +D+
Sbjct: 219 HRRTAFGRPLDFVFYRG---LGVVEASVLVT------------QASDHNPLLVDF 258


>gi|302820700|ref|XP_002992016.1| hypothetical protein SELMODRAFT_430260 [Selaginella moellendorffii]
 gi|300140138|gb|EFJ06865.1| hypothetical protein SELMODRAFT_430260 [Selaginella moellendorffii]
          Length = 379

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/181 (10%), Positives = 45/181 (24%), Gaps = 40/181 (22%)

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
           +  +     + +I+  +    D     +   C             +    +     +I G
Sbjct: 187 IVTDHGYFVLFNIYGPNVGCGDVERQDFMLQCR------------LESILKQGRRIIIVG 234

Query: 210 DFNRKI------------NYLGNNDDFWKTIDPN-----DSLIRFPKEKDSRCNANKN-- 250
           D N               +   +   F   +             F  ++   C +  +  
Sbjct: 235 DLNISPYPINSCDPGPEFDTNPSRQWFRSLLVSEVVRFQTRFACFILKEAYTCWSQASGA 294

Query: 251 --LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-------SDHCPISID 301
                   ID+ ++        + +   E    + D   R           SDH P+ + 
Sbjct: 295 EEFNYGSRIDHVLIAGPCAGHYMCDILLEFKRAKLDTLPRWSGGRSLKLDGSDHAPVILQ 354

Query: 302 Y 302
           +
Sbjct: 355 F 355


>gi|291298918|ref|YP_003510196.1| hypothetical protein Snas_1396 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568138|gb|ADD41103.1| hypothetical protein Snas_1396 [Stackebrandtia nassauensis DSM
           44728]
          Length = 341

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/308 (9%), Positives = 69/308 (22%), Gaps = 53/308 (17%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP---- 85
           N+  L           +               ++ + DI  + ++     + K+      
Sbjct: 46  NVENLPTANLECHGDWTDLLYYMK-------VQDHNPDIYLVHQISGKRQLDKLVSKMEK 98

Query: 86  --KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-------QSYPLLGAKDS 136
                +    +                +   AV     R               L +K  
Sbjct: 99  MFGEQYAAKIADPTPKKMKSPCGAPKQYQTNAVIYSTERFSVANADNNTWRAQALNSKGE 158

Query: 137 FSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              +   R   + V     ++GK +    +H  +           +         A+ + 
Sbjct: 159 CVNSNQARTQAVKVLLKDRLSGKHVTAASVHWATKRSGGPPCAASN---------AREIA 209

Query: 193 DWITQKKESLVPFVIAGDFNRKINY--LGNNDDFWKTIDPNDSLIRFPKEKDSRCN---- 246
           + ++ K       V+ GDFN             +          +        +C     
Sbjct: 210 EELSAKGYGGDLRVVGGDFNYTATSGGTDYRGWYKSINADLGGKLGLRDVVFDKCEKSGE 269

Query: 247 -------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSE-------ILYNEDDIKSRGKRL 292
                   + N      ID+    +      +  + +                    +R 
Sbjct: 270 LAKCLRANSTNGSGTSRIDFLFAAKPGGVPKVTATHTIGFDEGDAADRQVTGTDRADRRY 329

Query: 293 SDHCPISI 300
           SDH  +  
Sbjct: 330 SDHRAVRA 337


>gi|189464629|ref|ZP_03013414.1| hypothetical protein BACINT_00972 [Bacteroides intestinalis DSM
           17393]
 gi|189436903|gb|EDV05888.1| hypothetical protein BACINT_00972 [Bacteroides intestinalis DSM
           17393]
          Length = 356

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 63/263 (23%), Gaps = 50/263 (19%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           C A      R+   N+     +                   +      +DAD+VFL E+ 
Sbjct: 19  CNAKAKSTFRVFQLNLWHGGAKVPNGD------------QGIIDVLDQMDADVVFLCEVR 66

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
                          I +  E L    K         AI +  K          ++    
Sbjct: 67  DGKRF----------IPHVIEELKKRGKHYYGETFDLAIGILSKFKPDSMTKCCIVPGD- 115

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL--------------------DSLEN 175
                 +R  V++   I G+ +     HL    +                     D  E 
Sbjct: 116 -----ESRAMVKMTTTIEGQPVSFYSCHLDYRNYECYMPRGYSGTSWKKIDNPITDESEV 170

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDS 233
             +   S   +        +    +   P ++ GDFN   +     D    W        
Sbjct: 171 LKANRLSFRDESIHAFVQEVQTDIKQGRPVIMGGDFNEPSHLDWQADTKNLWDHNGAVIH 230

Query: 234 LIRFPKEKDSRCNANKNLRNKIP 256
                   ++    +   +   P
Sbjct: 231 WDCSMMLHEAGFKDSYREKYPNP 253


>gi|77554891|gb|ABA97687.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1070

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 19/124 (15%)

Query: 189 QWLKDWITQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPNDSLIRFPKE 240
           ++L++          P +I GDFN                  D + +      L    + 
Sbjct: 191 KFLQELTDVMLTQSDPVIIGGDFNLVRFAEEKSNGQINKRWADKFNSFISTAELRELHRV 250

Query: 241 KDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            D     NK     +  +D  ++  +           E  Y    ++S  +  SDH PI 
Sbjct: 251 GDKYTWTNKQDDPVREVLDRVLVSDS----------WEAFYPLTLVQSLTRVGSDHNPIL 300

Query: 300 IDYD 303
           ++ +
Sbjct: 301 VNLE 304


>gi|328708466|ref|XP_003243695.1| PREDICTED: craniofacial development protein 2-like [Acyrthosiphon
           pisum]
          Length = 367

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/300 (9%), Positives = 73/300 (24%), Gaps = 77/300 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WN  +L                      L          I+ LQE+         
Sbjct: 52  IKIATWNTLSLYRTGA--------------CQNLTDVLDTYGIQIIALQEI--RWPGKGQ 95

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                + +++S     +              AV +     +++  P+            R
Sbjct: 96  LKVGKYIVYFSGMEEGHAFG--------CGFAVHESLEPYVKEFNPISE----------R 137

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   + ++ K + ++ + + +                      + L   I  K    V
Sbjct: 138 ITL---LRVDTKPLNIILVCVHAPTETGEENMKD--------VFYEDLSQ-IYDKLPGNV 185

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDS---------------------LIRFPKEKD 242
             ++ GD N K     +          +++                          K   
Sbjct: 186 IKLVIGDLNAKCGKETHFMPMIGKESLHETSNGNGLRLISFAAAKDMIISSTTFPHKTIH 245

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                + +      ID+ ++ +     +         +   D        SDH  +   +
Sbjct: 246 KATWKSPDGTTCNQIDHILVQKRFRSCIKD----IHSFRGADCD------SDHFLLVAKF 295


>gi|225438271|ref|XP_002271965.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 2090

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 19/109 (17%)

Query: 202  LVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
              P+ I GDFN                    F + ID  +      +      +   N +
Sbjct: 939  TDPWCIEGDFNMTRFSNERRRGGRVSSSMRRFSEVIDELELRDLPLQGGPFTWSGGLNNQ 998

Query: 253  NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                ID F++ ++           E  +      +  + +SDH PI +D
Sbjct: 999  TMSRIDRFLVSED----------WEGYFKGVVQSTLSRPVSDHFPILLD 1037


>gi|147787189|emb|CAN66833.1| hypothetical protein VITISV_030891 [Vitis vinifera]
          Length = 1767

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ I GDFN                    F + ID  +      +      +   N +
Sbjct: 811 TDPWCIEGDFNMTRFSNERRRGGRVSSSMRRFSEVIDELELRDLPLQGGPFTWSGGLNNQ 870

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
               ID F++ ++           E  +      +  + +SDH PI +D
Sbjct: 871 TMSRIDRFLVSED----------WEGYFKGVVQSTLSRPVSDHFPILLD 909


>gi|302519814|ref|ZP_07272156.1| exodeoxyribonuclease III [Streptomyces sp. SPB78]
 gi|302428709|gb|EFL00525.1| exodeoxyribonuclease III [Streptomyces sp. SPB78]
          Length = 191

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/175 (9%), Positives = 50/175 (28%), Gaps = 24/175 (13%)

Query: 59  QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           ++     AD++ LQE+   ++    +V     W   ++           + +     +++
Sbjct: 24  EWLAGTSADVLCLQEVRAEAHQLPEEVARPEGWFSLHAP----------AADKGRAGVSL 73

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +      ++       D   R        +  ++ G  + V  ++L S       +  
Sbjct: 74  YTRREPDRVRTGFGSAEFDGSGR-------YVEADLPG--VTVASLYLPSGEVGTERQEQ 124

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                       + L++            ++ GD+N         +      +  
Sbjct: 125 KYRFMDEFLTYLKELRERA---AAEGREVLVCGDWNIAHTEADLKNWRGNRKNAG 176


>gi|281346330|gb|EFB21914.1| hypothetical protein PANDA_012384 [Ailuropoda melanoleuca]
          Length = 359

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 65/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S N+N L+                     +  + K  D  I  LQE       A  
Sbjct: 3   LSIISINLNGLNSP--------------IKRHRVADWIKRHDPSICCLQETHFEPKDAFR 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +        +             +                           
Sbjct: 49  LRVRGWSTIFHANGPQKKAGVAILISDRLDFKLE-------------------------- 82

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 83  ---AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 134

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 135 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 193

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 194 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 233


>gi|260172563|ref|ZP_05758975.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. D2]
 gi|315920856|ref|ZP_07917096.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694731|gb|EFS31566.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 356

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/376 (10%), Positives = 80/376 (21%), Gaps = 99/376 (26%)

Query: 2   IRKYVLALVFFLVPCTASVAQK----------------VRLVSWNINTLSEQEGVSLWKN 45
           ++K++L ++  ++P   + ++                 ++ +  N+              
Sbjct: 1   MQKWLLTIIIAILPVITACSKTDTEVSVPEEETGKKTEIKFLQLNLW------------V 48

Query: 46  SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105
              +       L +    L  DI    E+        V PK    +         +    
Sbjct: 49  ECTKVEHAPEYLIEQIVALQPDIATFCELYKGPQDDPVMPKLMQGL--------KNKGLI 100

Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165
             +      AV  K      +       K      G R AV         +      +  
Sbjct: 101 YYDARIDGRAVISKYPIKETERINKWMFKAILDVNGKRVAVY----PAHSEYRYYTCYYP 156

Query: 166 SFCFLDSLENTYSPS-------------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212
                 S+     P+              S   + AQ   +   ++ E       AGD N
Sbjct: 157 RGYNDGSVNWDKLPAPITDADKILAVCEESDRIESAQAFINNAAKELEQEALVFFAGDLN 216

Query: 213 RKINYLGNNDDFW--------------KTIDPNDSLIRFPKEKDSR--CNANKNL----- 251
                    D                 K +        +         C           
Sbjct: 217 EPSYLDWQADTKDLFDHRGCIVNWGTSKLLVQRGYKDAYRVIHPDPVKCPGFTFPADNKS 276

Query: 252 ------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS------------ 287
                         +  ID+     N    +          +    K             
Sbjct: 277 VIPENLSWAPEADERERIDFVYYYPNKNLQIKNAQIVGPTGSIVRGKRIEEQTKDPIIPP 336

Query: 288 -RGKRLSDHCPISIDY 302
              +  SDH  + I +
Sbjct: 337 VNNQWPSDHKGVLITF 352


>gi|292487323|ref|YP_003530195.1| hypothetical protein EAMY_0837 [Erwinia amylovora CFBP1430]
 gi|291552742|emb|CBA19787.1| UPF0294 protein yafD [Erwinia amylovora CFBP1430]
          Length = 261

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 88/286 (30%), Gaps = 63/286 (22%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           +   +++++ WNI                K+  +D+  + Q     +A +V LQE  +  
Sbjct: 32  TDGTRLKVLVWNIF---------------KQQRADWLSVLQDFGK-NAHLVLLQEAQTTP 75

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + + F  N + +       +          + +A A+        ++    L       
Sbjct: 76  ELVR-FATNNYLVADQVPAFVLPQHPSGVMTLASAHAIYCC-PLREREPLLRLSKS---- 129

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                  V      N + + V++IH  +F     + +             + L     Q 
Sbjct: 130 -----ALVTAYPLPNDQVLMVVNIHAVNFSLGIDVYS-------------KQLGPIGEQI 171

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P ++AGDFN   +    N  +    +     +RF  +   +            +D
Sbjct: 172 IHHQGPVIMAGDFNAW-SRQRINALYRFAREMGLREVRFTDDHRRKAFGRP-------LD 223

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +                     +  +      R SDH P+ ++++F
Sbjct: 224 FIFYRG---------------MDVTEASVLVTRASDHNPLLVEFNF 254


>gi|77461766|ref|YP_351273.1| exodeoxyribonuclease III xth [Pseudomonas fluorescens Pf0-1]
 gi|77385769|gb|ABA77282.1| catabolite repression control protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 259

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/274 (11%), Positives = 76/274 (27%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDAEVPAQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       S       D + R          ++ +  K+ +  + L S    D   
Sbjct: 69  ALYSRLQPKAVISGLGFETADRYGRY---------LQADFDKVSIATLLLPSGMNGD--- 116

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG---------------DFNRKINYLG 219
                  +   +       ++ +++     ++  G               D  +   +L 
Sbjct: 117 ----EDLNQKFKLMDDFGKYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLA 172

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFL 270
               +   I  N   +   +E     +                    DY ++     +F+
Sbjct: 173 PERAWMDEIVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RSA-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|25027245|ref|NP_737299.1| putative exodeoxyribonuclease [Corynebacterium efficiens YS-314]
 gi|259506618|ref|ZP_05749520.1| exodeoxyribonuclease [Corynebacterium efficiens YS-314]
 gi|23492526|dbj|BAC17499.1| putative exodeoxyribonuclease [Corynebacterium efficiens YS-314]
 gi|259165816|gb|EEW50370.1| exodeoxyribonuclease [Corynebacterium efficiens YS-314]
          Length = 331

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/309 (8%), Positives = 69/309 (22%), Gaps = 83/309 (26%)

Query: 47  VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106
            +R+ ++   +  + +   +D+V LQE+ +     +   +      +       +    +
Sbjct: 44  KERSETNLGFI-PWLEESGSDVVLLQEVRASEKDTEKALQPALEAGWH------YVGAPA 96

Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                  + +  ++          +G           +A      + G  + V  ++L S
Sbjct: 97  AAKGRAGVGILSRHALSDVS----IGFGSFLDSGRYIQASIADTTL-GVPVTVASLYLPS 151

Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------- 217
                  ++                 + + ++  +    VI GD+N              
Sbjct: 152 GSAGTDKQDEK-------YHFLDEFSEVLAERAATHPHMVIGGDWNICHRREDLKNWKTN 204

Query: 218 -------LGNNDDFWKTID--------------------------------PNDSLIRFP 238
                                                                       
Sbjct: 205 QKKSGFLPDERAWMDSVFGCFPDEQSQVVGGGDFFGAVDYVGTAGRREANPDPAWFDVAR 264

Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
           + +            +           IDY    ++  +   +          D   +  
Sbjct: 265 RLQPEGDGPYTWWTYRGKAFDTNAGWRIDYQAATKSMCERAERSWV-------DKAAAYD 317

Query: 290 KRLSDHCPI 298
            R SDH P+
Sbjct: 318 LRWSDHSPL 326


>gi|297852340|ref|XP_002894051.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339893|gb|EFH70310.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 334

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 94/306 (30%), Gaps = 61/306 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WN+N               K +  D   L    +  D  +V LQE    N    +
Sbjct: 56  IRIITWNMNG--------------KVSYEDLVELVGKERKFDLLVVGLQEAPKTNVAQFL 101

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              ++       +  +   +       ++   V+     +  + + + G      R   +
Sbjct: 102 QTASSPTHELLGKAKLQSIQLYLFGPKNSHTLVK----ELKAERHSVGGCGGLIGRK--K 155

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQKKESL 202
            AV + +  +  K+  +  HL +          ++      + + + + +  + + K+  
Sbjct: 156 GAVAIRINYDDIKMVFISCHLSA----------HAKKVDQRNTELRHIANSLLHRDKKKR 205

Query: 203 VPFVIAGDFNRKINYLGNN-----------------DDFWKTIDPNDSLIRFPKEKDSRC 245
              V  GD N +I  + N                  D   +  +  +    + +      
Sbjct: 206 DLTVWLGDLNYRIQDVSNRPVRSLIHNHLQSVLVSKDQLLQEAERGEIFKGYSEGTLGFK 265

Query: 246 NANKNLRNKIPIDY---------FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
              K        DY            D+  +K    ++    L++ D I       SDH 
Sbjct: 266 PTYKYNVGSS--DYDTSHKIRVPAWTDRILFKIQNTDNIQATLHSYDSI--DQVYGSDHK 321

Query: 297 PISIDY 302
           P+  D 
Sbjct: 322 PVKADL 327


>gi|253761401|ref|XP_002489104.1| hypothetical protein SORBIDRAFT_0069s002020 [Sorghum bicolor]
 gi|241947391|gb|EES20536.1| hypothetical protein SORBIDRAFT_0069s002020 [Sorghum bicolor]
          Length = 659

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 78/287 (27%), Gaps = 65/287 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R + WN+  L +               S    +R++       +V LQE    +   + 
Sbjct: 1   MRFLFWNVRGLGKT--------------SRKQQVREFIGEHKLQMVGLQETMKESFSDRE 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                    ++ + L +  K          I +      +  + + +       S    R
Sbjct: 47  LLDIAGTREFTWQYLPSKGKSG-------GILMGVDLENLELEDFSIHDFCIMMSVRDRR 99

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                       +   + ++  +   L                   +L +     +ES +
Sbjct: 100 T---------NFRWRFITVYGPANHDLAD----------------AFLDELKAVCQESPL 134

Query: 204 PFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI- 257
           P ++ GDFN        N    N       +     ++  + K S        +   PI 
Sbjct: 135 PVILGGDFNLIREANDKNSENINMGLINIFNEFIGEMQLRELKRSGQRYTWTNKQNNPIL 194

Query: 258 ---DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              D  +   N           E  +         +  SDH PI +D
Sbjct: 195 VNLDRVLFSVN----------WEDHFPLSTSWGLTRVGSDHMPILVD 231


>gi|308798843|ref|XP_003074201.1| Transcriptional effector CCR4-related protein (ISS) [Ostreococcus
           tauri]
 gi|116000373|emb|CAL50053.1| Transcriptional effector CCR4-related protein (ISS) [Ostreococcus
           tauri]
          Length = 416

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/267 (10%), Positives = 77/267 (28%), Gaps = 29/267 (10%)

Query: 21  AQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           A++VR++++N+               +   R  +          +  +D++  QE    +
Sbjct: 9   AERVRIMTFNVLCPAYKRSGDDGRESDDGTRAMTRTMRAIDLVTSTSSDVMCAQEFWHAD 68

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
                                       +      +    K   +       +   D   
Sbjct: 69  EATAAAWMTALE---------------RDGGRCDGLLTAVKKETLELLDARDVLFNDCGD 113

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R      V      +G ++ V++ HL      +S          +     ++L+  + + 
Sbjct: 114 RVA--CVVRARRTSDGTELIVVNTHLLFPHNENSSLIRLRECFKI----LEYLRGMMREP 167

Query: 199 K--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--NLRNK 254
           +     VP V+ GDFN             +            ++       +   +    
Sbjct: 168 ELRGRKVPIVVTGDFNGSNKGRVYQFFKSQGFVS-ALDSCQARDGCVTPWISHLNHHGEC 226

Query: 255 IPIDY-FVMDQNAYKFLIQESFSEILY 280
           + +D+ F+++ +     +  S+ E ++
Sbjct: 227 VGVDHMFLLNPSRQVIELGASWKEAVF 253


>gi|281604190|ref|NP_001094225.1| inositol polyphosphate-5-phosphatase B [Rattus norvegicus]
          Length = 916

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 81/317 (25%), Gaps = 67/317 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +S  +                 D+  V  QE+         
Sbjct: 272 VGTYNVNGQSPKECLRPWLSSDTKA---------------PDVYCVGFQELDLSKEAFFF 316

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 317 HDTPKEEEWFKAVSESLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 376

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q +Q       
Sbjct: 377 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFSQVDPSLPP 436

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE---------------- 240
                    +  GD N +I  L       K ++       +  +                
Sbjct: 437 LTISKHDVILWLGDLNYRIEELDVEK-VKKLVEEKAFHTLYAHDQLKIQVAAKTVFEGFT 495

Query: 241 ----KDSRCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                                    R     D  +           ++ S++ Y      
Sbjct: 496 EGEITFQPTYKYDTGSDNWDTSEKCRAPAWCDRVLWRG--------KNISQLSYQSHMSL 547

Query: 287 SRGKRLSDHCPISIDYD 303
                 SDH P+S  ++
Sbjct: 548 KT----SDHKPVSSVFE 560


>gi|260549149|ref|ZP_05823370.1| endonuclease/Exonuclease/phosphatase [Acinetobacter sp. RUH2624]
 gi|260407877|gb|EEX01349.1| endonuclease/Exonuclease/phosphatase [Acinetobacter sp. RUH2624]
          Length = 373

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/251 (10%), Positives = 62/251 (24%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL ++ + L  D++   E               W             +     D  
Sbjct: 114 DKYHLLLEHVRTLKPDLLLTLESDKT-----------WENALKEIEEEYPYRVPVPLDNL 162

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   +L  +              ++  +G  + +  +H K     +
Sbjct: 163 YGMHLYSRLPLRNTEVKFILSNEIPSIHT-------TVILRSGMPVQLYCLHPKPPSPTE 215

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++T   +          L     Q K+     ++ GD N            ++ I   
Sbjct: 216 AKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS-- 262

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +    ++     
Sbjct: 263 GLLDPRVGRHFINTFHADYSLLRWSLDHIFHS--------------TDFGLVKMQRLSHI 308

Query: 292 LSDHCPISIDY 302
            SDH P+ +  
Sbjct: 309 GSDHFPVYVVL 319


>gi|260950683|ref|XP_002619638.1| hypothetical protein CLUG_00797 [Clavispora lusitaniae ATCC 42720]
 gi|238847210|gb|EEQ36674.1| hypothetical protein CLUG_00797 [Clavispora lusitaniae ATCC 42720]
          Length = 476

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 63/239 (26%), Gaps = 15/239 (6%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLW-KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--- 75
               + ++S+N+   +           +  +  +   +L    K+ D DI+ LQE+    
Sbjct: 72  SGLPISIMSYNVLAQALIRRSLFPTNGAALKWGTRSQVLLSEFKHYDCDILCLQELDYIQ 131

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVRKKNVR--VLQQSYP 129
             +   +   K  +   Y      NH           A      +         +  S  
Sbjct: 132 YNSFWKQKLSKLGYNSQYYRSGTKNHGVAIFYKQEKFAFKHSMFINYDKETCGSVPLSTA 191

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
            L          +   ++   +++   I +   HL    F        +    ++ +Q +
Sbjct: 192 TLNVGLMIYLEFSEEVLKSHPKLSRDGIIIGTTHLFWHPFGT---YERTRQTYIVLKQMK 248

Query: 190 WLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
                +     +   F    AGDFN +           K +                  
Sbjct: 249 EFTRTLQLLYGAEKSFYRFFAGDFNSQPFDSPYLSITAKPVTYTARAKNVIGRALVHEW 307


>gi|194665894|ref|XP_001789792.1| PREDICTED: inositol polyphosphate-5-phosphatase, 75kDa [Bos taurus]
 gi|297473360|ref|XP_002686512.1| PREDICTED: inositol polyphosphate-5-phosphatase, 75kDa-like [Bos
           taurus]
 gi|296488992|gb|DAA31105.1| inositol polyphosphate-5-phosphatase, 75kDa-like [Bos taurus]
          Length = 924

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 79/314 (25%), Gaps = 61/314 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAK 82
           + ++N+N  S +E +  W             L    +  D   V  QE+           
Sbjct: 271 VGTYNVNGQSPKECLRPW-------------LSHDTQAPDVYCVGFQELDLSKEAFFFHD 317

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFS 138
              +  W    S     +             I     V++++   + +            
Sbjct: 318 TPKEEEWFKAVSEALHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMG 377

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
           R GN+  V +  + +   I V++ HL +        N          Q  Q         
Sbjct: 378 RMGNKGGVAIRFQFHNTSICVVNSHLAAHTEEYERRNQDYKDICSRMQFCQVDPSLPPLT 437

Query: 199 KESLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEK 241
                  +  GD N +I                       D     +        F + +
Sbjct: 438 ISKHDVILWLGDLNYRIEDPDVEKVKKLIEEKAFQTLYAYDQLRAQVAAKAVFEGFSEGE 497

Query: 242 DSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
            +     K              R     D  +           ++ +++ Y         
Sbjct: 498 LTFQPTYKYDTGSDDWDTSEKCRAPAWCDRVLW--------KGKNITQLSYQSH----MA 545

Query: 290 KRLSDHCPISIDYD 303
            + SDH P+S  +D
Sbjct: 546 LKTSDHKPVSSVFD 559


>gi|71051263|gb|AAH98852.1| Inpp5b protein [Rattus norvegicus]
          Length = 757

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 81/317 (25%), Gaps = 67/317 (21%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYN---AV 80
           + ++N+N  S +E +  W +S  +                 D+  V  QE+         
Sbjct: 113 VGTYNVNGQSPKECLRPWLSSDTKA---------------PDVYCVGFQELDLSKEAFFF 157

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDS 136
                +  W    S     +             I     V++++   + +          
Sbjct: 158 HDTPKEEEWFKAVSESLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGI 217

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             R GN+  V +  +++   I V++ HL +        N          Q +Q       
Sbjct: 218 MGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFSQVDPSLPP 277

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE---------------- 240
                    +  GD N +I  L       K ++       +  +                
Sbjct: 278 LTISKHDVILWLGDLNYRIEELDVEK-VKKLVEEKAFHTLYAHDQLKIQVAAKTVFEGFT 336

Query: 241 ----KDSRCNANKN----------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                                    R     D  +           ++ S++ Y      
Sbjct: 337 EGEITFQPTYKYDTGSDNWDTSEKCRAPAWCDRVLWRG--------KNISQLSYQSHMSL 388

Query: 287 SRGKRLSDHCPISIDYD 303
                 SDH P+S  ++
Sbjct: 389 KT----SDHKPVSSVFE 401


>gi|56708756|ref|YP_170652.1| hypothetical protein FTT_1761 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110671228|ref|YP_667785.1| hypothetical protein FTF1761 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224457979|ref|ZP_03666452.1| hypothetical protein FtultM_10376 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371380|ref|ZP_04987381.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254875636|ref|ZP_05248346.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56605248|emb|CAG46394.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321561|emb|CAL09777.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151569619|gb|EDN35273.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841635|gb|EET20071.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282160079|gb|ADA79470.1| hypothetical protein NE061598_10260 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 239

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 97/282 (34%), Gaps = 56/282 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++K  L+SWN            +K   K + +    +R    N + DI  LQE   ++  
Sbjct: 11  SKKFCLMSWN-----------SYKIDHKDSETFSAYIRHVYFNYNIDIFCLQEAVHHHGN 59

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              FP + + I +++  ++           H  +    K +   ++S             
Sbjct: 60  K--FPIDKFDINFASNIVLRSHNYGVATVSHYPVIKNVKILTTHRESVINTH-------- 109

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             + ++   + IN  K+ V++IH  +F            S  +   + + +K++I   ++
Sbjct: 110 --KASLITHLNINNTKVIVVNIHAINF-----------KSNKVYEYEFEKIKEFIA-PEK 155

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P +IAGDFN    +        K             ++     + +N      +D+ 
Sbjct: 156 YKHPIIIAGDFN---TWNRKRVKLIKDFCREFCFKVAFIDEPQLVKSFQN----NHLDFV 208

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    + +                      ++SDH PI  ++
Sbjct: 209 LYRGLSLEKAAVLDCK--------------KISDHNPIIAEF 236


>gi|327284263|ref|XP_003226858.1| PREDICTED: hypothetical protein LOC100553401 [Anolis carolinensis]
          Length = 1156

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 81/334 (24%), Gaps = 61/334 (18%)

Query: 12  FLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           FL P   + A+      + +VSWN+ T      V+   +     ++D  ++         
Sbjct: 520 FLAPLAKAPAKPENEFRITVVSWNVGTAMPPSDVTSLLHLNTGDSNDTDMIA-------- 571

Query: 67  DIVFLQEMGS--YNAVAKVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAV--RKKNV 121
             + LQE+ S     +      + W  +F       N     +       + V  +  ++
Sbjct: 572 --IGLQEVNSMINKRLKDALFTDQWSELFMEVLSPFNFVLVSTVRMQGVILMVFAKYYHL 629

Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
             L                GN+  V + + I G  +  L+ HL +       +       
Sbjct: 630 PFLHYIQTDCTRTGLGGYWGNKGGVSVRLAIFGHMVCFLNCHLPA----HMEKAEQRRED 685

Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------------- 222
                  Q  +                GD N +I  L                       
Sbjct: 686 FTTILHLQQFEGPSATGILDHDLVFWFGDLNFRIESLDIRFVKYAIDSNMLHQLWEKDQL 745

Query: 223 -------DFWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFVM-------DQN 265
                     K             + D   N        R     D  +          +
Sbjct: 746 NIAKTTWPILKGFQEGPLNFPPTFKFDVGTNMYDTSAKKRKPAWTDRILWRIKASGGSGS 805

Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
            +   +       +            +SDH P+ 
Sbjct: 806 HHPGRVACGV-LGVTQLCYCSHMEYTVSDHKPVV 838


>gi|322704280|gb|EFY95877.1| exonuclease III [Metarhizium anisopliae ARSEF 23]
          Length = 539

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/341 (11%), Positives = 85/341 (24%), Gaps = 91/341 (26%)

Query: 8   ALVFFLVPCTA---SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
           A++   VP  A    + + +R+++ N+            K               +  + 
Sbjct: 241 AVLPIAVPVAAQKRPLVRSIRVLTLNLWLGGRNVVDYHTKQ------------VSFLASQ 288

Query: 65  DADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
           D D+V LQE        +AK    N W                        +++  +   
Sbjct: 289 DVDVVALQESYFQDGRRLAKALGWNVW--------------------QAKDVSILSRYPI 328

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL--------- 173
                    G             V + ++ + K++ V ++HL +  +             
Sbjct: 329 GRVYREIEAGGT-----------VRIDLDGDAKQLLVWNVHLNNAPYGPYDLCFTNYSTN 377

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLV-----PFVIAGDFNRKIN------------ 216
                   +   QQ   +   + + KE        P ++AGDF    +            
Sbjct: 378 YIQRREEWARRVQQVYEIVHRLKEYKERKPEFELLPQILAGDFASPSHLDYTMKTRDLHC 437

Query: 217 -------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN--------LRNKIPIDYFV 261
                  +  +          +     F        N                  ID+  
Sbjct: 438 KGRDPFPWPVSRRVVLDAKWKDSFRDVFRDPWKVPGNTWSPVRRLNGDRPEPMDRIDFIY 497

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 K    +         +   +  +  SDH  +  ++
Sbjct: 498 --HKMLKTTHSDVVVVGDPKPEPYHADNEWTSDHAAVVSEF 536


>gi|58336404|ref|YP_192989.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           acidophilus NCFM]
 gi|227902541|ref|ZP_04020346.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           acidophilus ATCC 4796]
 gi|58253721|gb|AAV41958.1| putative endonuclease-exonuclease-phosphatase family protein
           [Lactobacillus acidophilus NCFM]
 gi|227869630|gb|EEJ77051.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           acidophilus ATCC 4796]
          Length = 237

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 30/177 (16%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAV-----------------AKVFPKNTWCIFYSTERLI 99
           + Q  K  + D +FLQE+ +++                      F  N    F +     
Sbjct: 27  VIQTMKKQNPDFMFLQEIDTHSTRSHYVNQVKMVENHFQNYDYTFANNFHTAFLAWPLYD 86

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
            H    S          + K    +++ YP+  A  S     +R  V +   IN  K  V
Sbjct: 87  PHGSVQSGLLS----MSKYKMTSAIRRKYPITSAFISKFTDLDRCFVIMRFPINNGKYLV 142

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216
           +          +S  + Y+    +   Q + + + + ++  +    ++ GDFN  + 
Sbjct: 143 MI---------NSHMSAYNKGGKMRKAQMKLISNVMEKEYLAGNYVIVGGDFNHALG 190


>gi|323335514|gb|EGA76799.1| Inp53p [Saccharomyces cerevisiae Vin13]
          Length = 971

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 88/320 (27%), Gaps = 60/320 (18%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQE 73
            T++    + + S+N+N  +++  +S W   +              +    DIV   LQE
Sbjct: 560 FTSTSNINLLIGSFNVNGATKKVDLSKWLFPIG-------------EKFKPDIVVLGLQE 606

Query: 74  MGSYNAVAKVFPKNTWCIFY---------STERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           +   +A + +    +   F+           +      + +    +     V+    + +
Sbjct: 607 VIELSAGSILNADYSKSSFWENLVGDCLNQYDDKYLLLRVEQMTSLLILFFVKADKAKYV 666

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           +Q             AGN+ AV +  E        ++ HL +         +   S    
Sbjct: 667 KQVEGATKKTGFRGMAGNKGAVSIRFEYGATSFCFVNSHLAAGATNVEERRSDYESIVRG 726

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------------------DDFW 225
               +       +           GD N +IN    +                   D   
Sbjct: 727 ITFTRT------KMIPHHDSIFWLGDMNYRINLPNEDVRRELLNQEEGYIDKLLHFDQLT 780

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
             I+       F +         K        D      ++ K         I+Y  +++
Sbjct: 781 LGINSGSVFEGFKEPTLKFRPTYKYDPGTGTYD------SSEKERTPSWTDRIIYKGENL 834

Query: 286 KSRGK-----RLSDHCPISI 300
                      +SDH P+  
Sbjct: 835 LPLSYSDAPIMISDHRPVYA 854


>gi|224013854|ref|XP_002296591.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968943|gb|EED87287.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 625

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 76/239 (31%), Gaps = 20/239 (8%)

Query: 22  QKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNA 79
           + + ++SWN+  L      ++    +  +  +       Y  +  +  ++ LQE    ++
Sbjct: 18  EPLLIISWNVAGLKPALNKIASDYGNNDKNKNKPHPFASYLSHHSNPTLLCLQESKIPHS 77

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
                 +  +C                       +    K   V++     LG+ +  S+
Sbjct: 78  HLSSRSEPHFCSSIPGYESFWSCATAEKCRGFNGVVTYAKQGCVVRADCNPLGSVELDSQ 137

Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
                     V  +  +    ++++       +L N          +    L++ + +++
Sbjct: 138 GR-------CVMTDHGRWVCFNVYVPCGGGASTLPNK--------MKFLNALREAMGRQR 182

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                 V+ GD N K++     D FW+    N   +   +  +         R +  +D
Sbjct: 183 TLGKSVVLVGDMNLKLD---KRDVFWRQRVVNIDDVLETEGVEGDDEEEGRRRRRWLLD 238


>gi|306835369|ref|ZP_07468390.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC
           49726]
 gi|304568735|gb|EFM44279.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC
           49726]
          Length = 297

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 76/311 (24%), Gaps = 47/311 (15%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80
            + + S N+N +          N           +  + +   ADIV +QE+ +    A 
Sbjct: 2   SLTIASVNVNGIRAACKQRNENNPG---------MNAWLEQTPADIVLMQEVRATPDQAT 52

Query: 81  AKVFPKNT--WCIFYSTERLINHSKRD---------------SNNDIHTAIAVRKKNVRV 123
             + P     W +  +       +                  S  D    IA   +++RV
Sbjct: 53  KALAPALEAGWHLELADAAAKGRAGVGILSRTPLADVEIGFGSFTDAGRWIAATTRDIRV 112

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVE---LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                P             R   E   +L E   K + +           D   N  +  
Sbjct: 113 ASLYLPSGDTDSPKLDEKYRFLDEFDSVLAENADKDMVIGGDWNICHRAQDLKNNKANEK 172

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            +    + +   D +        P                    W+            + 
Sbjct: 173 KAGHLPEERAFLDHVFGSFPDEAPQEKKNLGEWLGVVDYAGTTPWEPATAPQWFDVARRL 232

Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
           +            +           IDY    Q       +          D   +  +R
Sbjct: 233 QPEADGPYTWWTYRGQAFNNDAGWRIDYQAATQPLLDRAQRTWV-------DKAPTVEQR 285

Query: 292 LSDHCPISIDY 302
            SDH P+ ++Y
Sbjct: 286 WSDHSPLLVEY 296


>gi|281349888|gb|EFB25472.1| hypothetical protein PANDA_006397 [Ailuropoda melanoleuca]
          Length = 363

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 65/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S N+N L+                     +  + K  D  I  LQE       A  
Sbjct: 7   LSIISINLNGLNSP--------------IKRHRVADWIKRHDPSICCLQETHFEPKDAFR 52

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +        +             +                           
Sbjct: 53  LRVRGWSTIFHANGPQKKAGVAILISDRLDFKLE-------------------------- 86

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 87  ---AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 138

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 139 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 197

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 198 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 237


>gi|281339430|gb|EFB15014.1| hypothetical protein PANDA_009103 [Ailuropoda melanoleuca]
 gi|281343639|gb|EFB19223.1| hypothetical protein PANDA_010445 [Ailuropoda melanoleuca]
 gi|281345510|gb|EFB21094.1| hypothetical protein PANDA_020869 [Ailuropoda melanoleuca]
 gi|281345784|gb|EFB21368.1| hypothetical protein PANDA_017605 [Ailuropoda melanoleuca]
 gi|281348177|gb|EFB23761.1| hypothetical protein PANDA_019415 [Ailuropoda melanoleuca]
 gi|281354576|gb|EFB30160.1| hypothetical protein PANDA_018241 [Ailuropoda melanoleuca]
          Length = 359

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 65/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S N+N L+                     +  + K  D  I  LQE       A  
Sbjct: 3   LSIISINLNGLNSP--------------IKRHRVADWIKRHDPSICCLQETHFEPKDAFR 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +        +             +                           
Sbjct: 49  LRVRGWSTIFHANGPQKKAGVAILISDRLDFKLE-------------------------- 82

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 83  ---AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 134

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 135 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 193

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 194 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 233


>gi|315154639|gb|EFT98655.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0043]
          Length = 255

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 85/287 (29%), Gaps = 43/287 (14%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86
           +SWNIN  S       +             + +     + D++ L E             
Sbjct: 1   MSWNINQRSGFGCKENFTPI----------VFEEINKHNTDLIILSEF---------VKF 41

Query: 87  NTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
             +  F S  + I +                IAV++  ++    +  +L   ++ +    
Sbjct: 42  PGYLTFISQLKNIGYIVMCDPRSDRDVNEILIAVKEDVLKGETFTINILPNVETKTSLYP 101

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
              + + ++ +G+++               + N+          Q   L  ++++ + S 
Sbjct: 102 NF-LHVSLKYDGQEL-------NIIGIRIRIRNSSPSDYQKRKLQLDSLIRYMSKIEGS- 152

Query: 203 VPFVIAGDFNRKI----NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IP 256
              ++AGDFN           + +   +       L    K      +  K   +   + 
Sbjct: 153 --IILAGDFNNGYFKDGETSTSYNGKSREFYSYPLLKEESKVAGLNLHTPKEYGSWKNMK 210

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +D+ +        LI   +       ++ +     + DH  +     
Sbjct: 211 LDHILTRG---LNLINPIYDWGFTKNNNYQPNEIGVPDHAMLLATIS 254


>gi|298713059|emb|CBJ48834.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 486

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 3/112 (2%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            R++S+N+    L+  +       +  R  + +  +R       ADI+ LQE   Y+ + 
Sbjct: 22  FRVMSFNMLAQQLATSKMFKYVPRNQLRKHNRWPRVRAEVSRYGADIICLQECDLYDQIL 81

Query: 82  KVFPKNTWCIFYSTERLINHSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
               ++       T     + +R ++      AI    +  R+L       G
Sbjct: 82  ASLQEHGERADQGTRFEGVYKRRKNNGLSHGVAILYDTQVFRLLDSDSCEYG 133


>gi|163756143|ref|ZP_02163259.1| hypothetical protein KAOT1_09766 [Kordia algicida OT-1]
 gi|161324017|gb|EDP95350.1| hypothetical protein KAOT1_09766 [Kordia algicida OT-1]
          Length = 395

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/328 (9%), Positives = 75/328 (22%), Gaps = 75/328 (22%)

Query: 27  VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA----VAK 82
           + +N+    E             +      L     +   D+  + E+         + +
Sbjct: 1   MFYNLLNFPEL------------SLDRLDELEIIISDYQPDLFMVCELNDQFGAGLILNR 48

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +   N            +      +N +   I        +  Q       +D      N
Sbjct: 49  LQMINPNYAQAIYFNNTSDDNGSDSNLLQNLIYYDSSKFILEGQDIITTNLRD-----FN 103

Query: 143 RRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           R  ++L  V      I +                       L     +    +++   + 
Sbjct: 104 RYTLKLNTVNQATNPIRLEVFVTHLKAG------NSPEDELLRFLMVEEFVSYLST-IDP 156

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK------------ 249
               ++AGD N   +            +    +    +  D   N+              
Sbjct: 157 NSKVLLAGDLNLYTSNDITFQKLIDVTNAIPLVDPINRLGDWHTNSAFLDVLTQSTRTQG 216

Query: 250 -----NLRNKIPIDYFVMDQNAYK----FLIQESFSEILYN------------------- 281
                +       D+ +   N       + +  S+     N                   
Sbjct: 217 GLGGASGGFDDRFDFILTSGNVLTNSDLYYVPNSYKSYGNNLNPNCYNRAINSSDCAEVP 276

Query: 282 ------EDDIKSRGKRLSDHCPISIDYD 303
                    +++    +SDH P+ ++ +
Sbjct: 277 GSGVSYSQTLRNALHDMSDHLPVVMELE 304


>gi|290984827|ref|XP_002675128.1| phosphatidylinositol polyphosphate 5-phosphatase [Naegleria
           gruberi]
 gi|284088722|gb|EFC42384.1| phosphatidylinositol polyphosphate 5-phosphatase [Naegleria
           gruberi]
          Length = 1040

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 82/303 (27%), Gaps = 36/303 (11%)

Query: 23  KVRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            + + +WN+N      +        +    +D   +     ++ A  +  +E  +     
Sbjct: 325 SIVVCAWNVNNKFPSADSSLAKWLHLDEFEADIYAIGMQEIDMTAASLLKEETETGQEWQ 384

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +  K            +  +++     I+ AI +++     + +              G
Sbjct: 385 NLLIKTFADEAKQNRYKLVSARQLVG--IYHAIFIKESFANDINEVRNCAEGVGIMGMMG 442

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT----------------YSPSCSLLS 185
           N+  V +  ++       +  HL          N                 Y P      
Sbjct: 443 NKGGVGVRFKLFDSTFCFITAHLAPHMGAVERRNQNFHDIVKKTDFGNPSLYRPDQHDFF 502

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-----GNNDDFWKTIDPNDSLIRFPKE 240
                L   I Q    +   +   D+   + Y       N  + +      +       +
Sbjct: 503 FWYGDLNYRINQPNLIVREKIKQQDYKFLLKYDQLMIEKNAKNAFVGFAEGEINFDPTYK 562

Query: 241 KDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
            DS  +              D  +  ++    ++ +S+            +  ++SDH P
Sbjct: 563 FDSGTDVYDTSEKGRVPSYTDRILWREDEKSTIVHKSYKSF---------KEYKMSDHKP 613

Query: 298 ISI 300
           ++ 
Sbjct: 614 VTA 616


>gi|242047432|ref|XP_002461462.1| hypothetical protein SORBIDRAFT_02g003036 [Sorghum bicolor]
 gi|241924839|gb|EER97983.1| hypothetical protein SORBIDRAFT_02g003036 [Sorghum bicolor]
          Length = 1203

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 19/123 (15%)

Query: 189  QWLKDWITQKKESLVPFVIAGDFNRKINYLG------NNDDFWKTIDPNDSLIRFPKEKD 242
            ++L +    K  +  PF+I GDFN+            +     +     D          
Sbjct: 987  EFLNEIRAVKSSAPGPFLICGDFNQIYQAADKNNDRLDYRSMRRFRRLIDDCRLEELYLH 1046

Query: 243  SRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             R     N R +     ID+    Q+              +    ++      SDH P+ 
Sbjct: 1047 GRLFTWSNERRRPTLERIDHAFASQD----------WIEAFPRHHLRCLSSDCSDHAPLL 1096

Query: 300  IDY 302
            ++ 
Sbjct: 1097 LEL 1099


>gi|332322201|emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 77/285 (27%), Gaps = 66/285 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L+SWN   +                    +  R+         +F+QE  S N   K+
Sbjct: 1   MSLLSWNCRGIGA--------------REKRSQTRKLINTHKPSFLFIQESKSENINPKI 46

Query: 84  FP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                +   I +     + +S    +    +A  +   ++                    
Sbjct: 47  IKTIWHNDDIEWLFSPSVGNSGGLISIWEKSAFQMESSHI-------------------- 86

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R  + +   I   +   L I++ + C ++     ++                      +
Sbjct: 87  QRNWIAIQGSIVHPRFRCLLINIYNPCNIEGRAVVWNDISEFCRI--------------N 132

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKI 255
           + P +I GDFN  ++               D                +      +   K 
Sbjct: 133 IFPTLIMGDFNEVLSSSERGSGLSSQEGVEDFRNFIQSLGLIDISSANGRFTWFHGNRKS 192

Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            +D  ++  +              Y    ++   + +SDHCPI  
Sbjct: 193 RLDRCLVTSD----------WIQQYPNLSLQILNRTVSDHCPILA 227


>gi|213983233|ref|NP_001135511.1| synaptojanin 2 [Xenopus (Silurana) tropicalis]
 gi|195539815|gb|AAI67930.1| Unknown (protein for MGC:135775) [Xenopus (Silurana) tropicalis]
          Length = 1553

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/339 (13%), Positives = 89/339 (26%), Gaps = 71/339 (20%)

Query: 25  RLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-----ADI--VFLQEMG 75
           R+   +WN+N   +     L  + +     D   L       D      DI  V  +EM 
Sbjct: 532 RVAMGTWNVNGGKQFRSKILSTSELTDWLLDSPKLSGTPDFQDDESNPPDIFAVGFEEMV 591

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQS 127
             +A   V    T    ++ +     S+      + +         + VR  ++  ++  
Sbjct: 592 ELSAGNIVSASTTNRKVWAEQIQKALSRSHRYILLTSGQLVGVCLFVFVRPYHMPFIRDV 651

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                      + GN+ AV +  +        +  H  +       +N          + 
Sbjct: 652 ATDTVKTGLGGKTGNKGAVAIRFQFYSTSFCFICSHFTAG------QNQVKERNEDYKEI 705

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYL------GNNDDFWKTIDPNDSLIR----- 236
            Q L   + +   S       GDFN +++              WK +   D L       
Sbjct: 706 TQKLSFPMGRNVFSHDYVFWCGDFNYRLDLPYDEVFYYIRRQDWKKLLEYDQLQLQKSAS 765

Query: 237 --FPKEKDSRCNANKNLRN---------------KIPIDYFVMDQNAYKFLIQESFSEIL 279
             F    +   +     +                    D  +      K+  ++S  +I 
Sbjct: 766 KIFKDFYEGTIHFGPTYKYDIGSEAYDTSEKCRTPAWTDRVLW--WRKKWPFEKSARDIN 823

Query: 280 YNEDD------------------IKSRGKRLSDHCPISI 300
             + D                          SDH P+  
Sbjct: 824 LLDSDLDFSTKIKHTWTPGALMYYGRAELPYSDHRPVLA 862


>gi|269959879|ref|ZP_06174256.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835178|gb|EEZ89260.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 310

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 74/296 (25%), Gaps = 64/296 (21%)

Query: 7   LALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
            A + FL+P   +  Q     + +V +N+   +                 D      Y  
Sbjct: 69  FASIAFLLPTQITNNQTCENPLTIVQFNLFYENP----------------DINQFINYLL 112

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
              AD+V +QE+            + +  ++  +R I +              +  +   
Sbjct: 113 KHPADLVVMQELSPQVGEKLHLLDDIYPFYFGGQRGIGYPSNQ---------MILSRYPL 163

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                Y     ++          +    +++   I ++  H  S            P   
Sbjct: 164 EPVSIYHTPDGQE---------VIRATWQVDN-PITLMTAHPPSP--------RTEPLWQ 205

Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             +   + ++             ++ GDFN         D  +               K 
Sbjct: 206 RRNALIRTIETLTDLYPTPE--MIVIGDFNLS-ASSPRFDGLFSRFQTQPVASWPTSVKG 262

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
               A   +     ID+  +       +I               +     SDH  +
Sbjct: 263 LPVPAFAMIG----IDHLWLKSENSNRMICS----------RASTNQPNGSDHRLV 304


>gi|147788645|emb|CAN69756.1| hypothetical protein VITISV_008645 [Vitis vinifera]
          Length = 1196

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 19/108 (17%)

Query: 202 LVPFVIAGDFNRKIN---------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ I GDFN  +                 F + +D    +    +  +   N  +N +
Sbjct: 636 EDPWCIGGDFNITLFPRERSSQRRMNSXMRKFAEIVDDLGLMDLPLQGGEFTWNGGQNNQ 695

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
               +D F++  +              YN        + +SDH PI +
Sbjct: 696 VWARLDRFLVSPS----------WXDQYNGISQCRLPRPVSDHFPIML 733


>gi|119627713|gb|EAX07308.1| inositol polyphosphate-5-phosphatase, 75kDa, isoform CRA_b [Homo
           sapiens]
          Length = 720

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 67  TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 124

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 125 KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 184

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 185 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 244

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 245 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 304

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 305 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 352

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 353 TSDHKPVSSVFD 364


>gi|330982163|gb|EGH80266.1| exonuclease III [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 114

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/101 (10%), Positives = 27/101 (26%), Gaps = 18/101 (17%)

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----------IDYFVM 262
           K ++L    ++ + +     +  F        +       +             ID  + 
Sbjct: 21  KCSFLPEEREWMERLKNWGLVDSFRHLYPEVVDLFSWFDYRSRGFEDEPKRGLRIDLIMT 80

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                  + +          D      ++ SDH PI ++  
Sbjct: 81  STGLQPRIKEAGV-------DYDLRAMEKPSDHAPIWLELS 114


>gi|258566874|ref|XP_002584181.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237905627|gb|EEP80028.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 390

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 12/174 (6%)

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
               +  A  R     +    G +  VL +        D    +   S  L+ ++     
Sbjct: 220 PSRGWDAASIRIVTIGVFTHRGSRKTVLGMSTHL---DDQGSKSRHESAKLILKKVDEYL 276

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANK 249
               + K+ +    +AGDFN K+N        D     +D  D +    +  +       
Sbjct: 277 H--GEYKDRISGLFLAGDFNSKVNQEAYQVFIDPTSPLLDARDQVKPGDRYGNEITYTGF 334

Query: 250 NLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                    IDY ++   +                 +    G   SDH  +  D
Sbjct: 335 GYEGEPATRIDYILVGPRSEAGF--PWTVNGYAVLPNRFDDGVLNSDHRAVVAD 386


>gi|213514958|ref|NP_001134332.1| CCR4-NOT transcription complex, subunit 6 [Salmo salar]
 gi|209732438|gb|ACI67088.1| CCR4-NOT transcription complex subunit 6 [Salmo salar]
          Length = 356

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 48/137 (35%), Gaps = 6/137 (4%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           + Q   N  ADI+ LQE+ +    +
Sbjct: 188 FSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKSIMQEILNCSADIISLQEVETVQYYS 247

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSYPLLGAKDSF 137
              P+     + S     + ++  S+ D       AI  R +   ++Q+           
Sbjct: 248 YFLPELKEQGYESFFSPKSRARTMSDCDRKHVDGCAIFYRTEKFSLVQKHTVEFNQLAMA 307

Query: 138 SRAGNRRAVELLVEING 154
           +  G+   +  ++  + 
Sbjct: 308 NSEGSEAMLNRVMTKDN 324


>gi|118100149|ref|XP_001234813.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 858

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 98/328 (29%), Gaps = 65/328 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           + LV+WN+ T S    V+        + +           +D  ++ LQE+ S   N ++
Sbjct: 403 LHLVTWNVGTASPPPDVTSLLQLDSPSPA-----------IDMYVIGLQEVNSRITNFLS 451

Query: 82  KVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFS 138
            +   + W IF+ T      + K  S       + +  +  ++  ++           + 
Sbjct: 452 DLVFDDPWSIFFMTVLSPLGYIKLSSIRMQGLLLLIFVKHDHLPFIRDVRTNYTRTGLYG 511

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + + + G  I  ++ HL +                 +  + + +   +   
Sbjct: 512 YWGNKGGVTVRMSLYGHTICFINCHLPAHMENTEQRLDDFEKILEMQFEEENVPSTLDH- 570

Query: 199 KESLVPFVIAGDFNRKINYLGNN-------DDFWKTIDPNDSLIRF-------------- 237
                     GD N +I   G +       +  +  +   D L                 
Sbjct: 571 ----DVLFWFGDLNFRIADYGIHFVRESINNKRYNLLWEKDQLNMAKKKEAFLQEFIEGP 626

Query: 238 -----------------PKEKDSRCNANKNLRNKIPIDYFVMD------QNAYKFLIQES 274
                             +E+ S    N+  R     D  +          +     +E 
Sbjct: 627 LQFKPTYKFDLHSDVYDTREQKSLFWFNEKKRKPAWTDRILWRMKSLCQHASKDDFSEEE 686

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302
            +  +   + I      +SDH P++  +
Sbjct: 687 QTISVTLNNYISHMSYGISDHKPVTGTF 714


>gi|197335279|ref|YP_002156770.1| protein VV1_1880 [Vibrio fischeri MJ11]
 gi|197316769|gb|ACH66216.1| protein VV1_1880 [Vibrio fischeri MJ11]
          Length = 290

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 76/292 (26%), Gaps = 64/292 (21%)

Query: 14  VPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            P +A +    ++ ++ WNI           +K   +        L         D+V L
Sbjct: 57  FPASAPLDRNGELSVLVWNI-----------YKQQNEGWKRALIELSD-----KTDLVLL 100

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE      + +      +             +     D    +    K   +   ++   
Sbjct: 101 QEASLTPELKEFVVNKRYSAELV--------RAFDVFDTSAGVLSLAKEQALRVCAH--- 149

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
            A + + R      +      NG+++ V++IH  +F                     Q +
Sbjct: 150 TAVEPWLRLPKSALLSEYPLSNGQELMVINIHAINFTIGTEDYQ-------------QQI 196

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                +      P +IAGDFN       +           + L                 
Sbjct: 197 ASLSKEVSRHSGPMIIAGDFN-----TWSEARLATLRKQVEELDMKEVIFSPDERMR--F 249

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              + +D+                     +  + +S     SDH P+   + 
Sbjct: 250 MTGLALDHIFYRG---------------LDIKEARSIKSHASDHNPLQAIFS 286


>gi|58038559|ref|YP_190523.1| hypothetical protein GOX0070 [Gluconobacter oxydans 621H]
 gi|58000973|gb|AAW59867.1| Hypothetical membrane-spanning protein [Gluconobacter oxydans 621H]
          Length = 208

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 78/289 (26%), Gaps = 85/289 (29%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +  +       +++SWN+                +   +    +    +  D DIV +QE
Sbjct: 1   MTTSLQSGASFKILSWNLY---------------RWEGASLEDVLTVIRAEDPDIVVMQE 45

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             +  AV ++            E L  +  R          A   +       S+  L  
Sbjct: 46  AQT--AVDEL-----------PEILGGYYDRIPLPGRPHGTACWSRLPFTRPPSFCRLPR 92

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                    R A  +          + ++HL     L+              +Q + +  
Sbjct: 93  GLLVK----RTAQLIDF----GSFSLANVHLSHGQILN-------------RRQLRSISA 131

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            +  +       VI GDFN               + P             + +   N   
Sbjct: 132 NMRHRA------VIMGDFN--------------LVGPVLLPGFLDVGPKEKTHRMLNHV- 170

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + +D  ++                  +  + ++  +  SDH PIS+  
Sbjct: 171 PLRLDRCLVRG---------------LSRLEARALPRFGSDHRPISVTL 204


>gi|116197451|ref|XP_001224537.1| hypothetical protein CHGG_06881 [Chaetomium globosum CBS 148.51]
 gi|88178160|gb|EAQ85628.1| hypothetical protein CHGG_06881 [Chaetomium globosum CBS 148.51]
          Length = 1206

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 66/222 (29%), Gaps = 47/222 (21%)

Query: 92  FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
            ++  +LI  ++R++   I + + VR        +  P+  A                + 
Sbjct: 467 HHNWTKLIPTTRREATWPIRSMLWVRSDI---EVEQIPVPSAD----------LTAARIR 513

Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211
           +  + + ++ ++++              +     ++   L         +    ++AGDF
Sbjct: 514 LPDRAVLLVSVYVEGGS---------DEALEDAMREIDRLIRRFRNGTGTRTDIILAGDF 564

Query: 212 NR----------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
           NR               G  D     +D +      P+         ++   +  ID  +
Sbjct: 565 NRHDQLWGGDDVSPRRQGEGDRIINLMDEHSLCSLLPR----GTKTWQSGDIESTIDLVL 620

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                   L++ +                  SDH  I  D+D
Sbjct: 621 ASAELADQLLRCTIHPC-----------DHGSDHRAIETDFD 651


>gi|84496098|ref|ZP_00994952.1| hypothetical protein JNB_01225 [Janibacter sp. HTCC2649]
 gi|84382866|gb|EAP98747.1| hypothetical protein JNB_01225 [Janibacter sp. HTCC2649]
          Length = 326

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 81/308 (26%), Gaps = 60/308 (19%)

Query: 1   MIRKYVLALVFFL-----VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55
           + R+  LAL   +     +  TAS   +  +               +  ++++   ++  
Sbjct: 69  LRRRIGLALPALVVALVPLTLTASAMGESTVA-------PSGNDEVVAASNLQFGRAEPG 121

Query: 56  LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115
            +    + LD D + L E+    A A      +  +           +  S         
Sbjct: 122 AIVDRIRTLDVDTLVLTEVTPETADAIDAAGASELL---------PHRVGSPQLGADGTV 172

Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175
           +  ++      +  + G  D              V        V  +H            
Sbjct: 173 ILSRHSLTKVSAEHVPGLFDQP---------VATVHAPTGDYVVRAMHPYPP-------- 215

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
             +       +Q     DW++++     P V+AGDFN    +          +D      
Sbjct: 216 -TAKLVRGWHRQLGQAADWVSEQ-PEQTPLVLAGDFNASQAHPAYRRLAEGMVD----AQ 269

Query: 236 RFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
           R       R     +       +D+ ++       ++    S +               D
Sbjct: 270 RATGSGWVRTWPQGSGIPAFVQLDHVLVRHG---NVVDAGMSVVPGT------------D 314

Query: 295 HCPISIDY 302
           H  +    
Sbjct: 315 HALVWARL 322


>gi|307105297|gb|EFN53547.1| hypothetical protein CHLNCDRAFT_136679 [Chlorella variabilis]
          Length = 796

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/386 (11%), Positives = 92/386 (23%), Gaps = 97/386 (25%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVS----------------LWKNSVKRTTSDYTLL 57
           +  + +  + V +VS N+   ++  G                                 +
Sbjct: 407 LTFSGTAQRGVPVVSLNVAMAAQPGGGKAANILADKYATGGMHKYCPPQFLAWPYRKQRI 466

Query: 58  RQYAKNLDADIVFLQE---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
            Q    L  DI+ LQE   +       +  P      F +          D        I
Sbjct: 467 IQELLGLQPDILCLQEASVVERGWFEEEFEPLMRQHGFEALYYARKRRPFDPPTMPEDGI 526

Query: 115 AVRKKNVRVLQQSYP-----------LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163
           ++  +  R+ +Q+             L G    + R      V  L+     +  +L   
Sbjct: 527 SLLYRTARLQRQASKVVKLGECVGASLHGKFHDYVRQREDGVVLALLRDVRTQRTLLAGC 586

Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKKESLVPFVIAGDFNRKIN--YLG 219
              F      +   + +  +      +L+    +  K  + VP ++ GDFN         
Sbjct: 587 THLFWDPRFPDVKAAQAQLVCRAAGAFLQQQRLLGDKAAAAVPAILCGDFNSLPFKRRSD 646

Query: 220 NNDDF----------WKTIDPNDSLIRFPKEKDSRCN----------------------- 246
             D            +  +     +    ++  SR +                       
Sbjct: 647 PFDAVPPSQTLVSGAYTVLSSKAGIDSSHQDHPSRRSLAGSCAAARDLARARLSSDPLSL 706

Query: 247 --------------ANKNLRNKIPIDYFVMDQNAYKFLIQ--------------ESFSEI 278
                           K       +DY  + +  +                    S    
Sbjct: 707 RSAAVAAWGREPPLTTKTDGFAGCLDYVWLSEGHWAVSAALQLPYRWDPAPPGQPSAVND 766

Query: 279 LYNEDDIK--SRGKRLSDHCPISIDY 302
             +  D+      +  SDH  ++   
Sbjct: 767 PEDVPDMPPIPDDRFPSDHLALAFKL 792


>gi|288802560|ref|ZP_06407999.1| exodeoxyribonuclease III [Prevotella melaninogenica D18]
 gi|288335088|gb|EFC73524.1| exodeoxyribonuclease III [Prevotella melaninogenica D18]
          Length = 253

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 70/277 (25%), Gaps = 71/277 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++SWN   +                      L++  ++   DIV LQE       A  
Sbjct: 1   MRIISWNTFGIRT----------------ALPNLQKMLESCTPDIVCLQETKVRTQYAN- 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  +++      H          TA+ ++   +  +      +            
Sbjct: 44  FDFKGYQQYWNESTDFAHLG--------TALLLKSSTLISVTYDNFDVYYDKGN------ 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    K+I+V+ +++       +  +               L+           
Sbjct: 90  -----VIVTELKEIYVVCVYVPYAGATATTRDNRHHWYKCFQSIIHQLQQ--------NK 136

Query: 204 PFVIAGDFNR-----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-C 245
           P VI GDFN                           +  + +     +  +     S   
Sbjct: 137 PCVICGDFNVVQQDIDAWDKAVINTSLACFSKEERAEIGRFVQEEQLIDVYRYLYPSTKS 196

Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQE 273
                               ID F++ +     ++  
Sbjct: 197 EGFTYFPFGSDYRKNKKGYRIDLFLISKQLISKVVDC 233


>gi|224008636|ref|XP_002293277.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971403|gb|EED89738.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1850

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 62/257 (24%), Gaps = 26/257 (10%)

Query: 59  QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAV 116
           Q  + L  DI+ + E                            +   +  + +      +
Sbjct: 79  QTIQELGIDIMAMCESNRAWTYKNKQEYERQTHLLWHNTRTVFASCPTGAEGYQPGGNVL 138

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSL 173
                   +           F     R       +++        V          L + 
Sbjct: 139 NINGPAAGRVKATGTDKWGRFCWMELRGQRDEGWVIISA----YRVCQEESHKPGALTAY 194

Query: 174 ENTYSPSCSL-------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226
              Y+   S          Q    L   IT K+E     ++  D N       +  +   
Sbjct: 195 MQQYTAMLSAGITRPNPRQQILDNLLHLITSKREQGFRPILLMDANEDWVTNSHGKNQLA 254

Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286
                 +L     E+  +        N   +DY ++D  A   +              + 
Sbjct: 255 DFMAAANLQDAFYERHQQSPPTYTRGN-SRLDYILVDPVALPCI---------RRVGYLG 304

Query: 287 SRGKRLSDHCPISIDYD 303
           +     SDHC   +D+D
Sbjct: 305 THEGNFSDHCLEYVDFD 321


>gi|291405395|ref|XP_002718934.1| PREDICTED: inositol polyphosphate-5-phosphatase K-like [Oryctolagus
           cuniculus]
          Length = 457

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 94/319 (29%), Gaps = 53/319 (16%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
            + +V+WN+              +  +  SD   L     +LD  ++ LQEM S   + +
Sbjct: 18  SMHVVTWNV-----------ASAAPPKDLSDLLQLNNQDLDLDMYVIGLQEMNSGIVSFI 66

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +    ++ W  F+          + S+  +      I V+  ++  +Q           +
Sbjct: 67  SDTAFEDPWSSFFMDVLAPLSFVKVSHVRMQGLLLLIFVKYHHLPFIQILSTKSTPTGLY 126

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
              GN+  V + + + G  + V++ HL          N           + Q  + +   
Sbjct: 127 GYWGNKGGVNICLRLYGYYVSVINCHLPP----HIANNDKRLEHFDRILEMQNFEGYDIP 182

Query: 198 KKESLVPFVIAGDFNRKINYLGNN--------------------------DDFWKTIDPN 231
                   +  GD N +I  LG +                          D   +     
Sbjct: 183 NILDHDLILWFGDMNFRIEDLGLHFVRECIANQYYSALWEKDQLRIAKKQDLLLREFQEG 242

Query: 232 DSLIRFPKEKDSRCNANKN---LRNKIPIDYFVMD----QNAYKFLIQESFSEILYNEDD 284
             L     + D   N        R     D  +        A  ++   S    L  +  
Sbjct: 243 PLLFPPTYKFDKNSNNYDTSEKRRKPAWTDRILWRLKRQPQATSYMSNPSTYFFLTLKHY 302

Query: 285 IKSRGKRLSDHCPISIDYD 303
                  +SDH P++  +D
Sbjct: 303 GSHMMYYISDHKPVTGTFD 321


>gi|296123857|ref|YP_003631635.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
 gi|296016197|gb|ADG69436.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
          Length = 283

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/215 (11%), Positives = 54/215 (25%), Gaps = 49/215 (22%)

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           +    PLL  +  +     R  + L +    + + +  +HL S    D  +         
Sbjct: 66  VAYREPLLSFEPVYVDRSERAPL-LELRTGHETLLIALVHLPSLLHRDETDQD------- 117

Query: 184 LSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGN--------------------- 220
                  L   I ++++       ++ GDFN                             
Sbjct: 118 --IIISDLISRIDEQEKFAGHSRTMVIGDFNLNPFSRQVIGANGLHATMSRQLVKKGSRT 175

Query: 221 ---------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                     +  W+ +  +           S   +  N       D  ++       L+
Sbjct: 176 VDGNERKMFYNPMWRFLGDDGEHPPGTHFYRS---STSNAYFWHVFDQVLLRNELTDRLV 232

Query: 272 QESF----SEILYNEDDIKSRGKRLSDHCPISIDY 302
                   +      D  +   +  SDH P+ +  
Sbjct: 233 DLKIITKLNSFSLLNDSGQPDRENFSDHFPVVLKL 267


>gi|295663072|ref|XP_002792089.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides
           brasiliensis Pb01]
 gi|226279264|gb|EEH34830.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides
           brasiliensis Pb01]
          Length = 570

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/202 (8%), Positives = 38/202 (18%), Gaps = 60/202 (29%)

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVP 204
              ++  G+ + +      +F  L                      +   +    +    
Sbjct: 77  AATLDSEGRCVIL---EFPAFVLLGVYCPANRDEMRDGFRKAFVNAVDARVRNLVDMGKR 133

Query: 205 FVIAGDFNRKIN----------------------YLGNNDDFWKTIDPND---------- 232
            ++ GD N   +                             F + +              
Sbjct: 134 VILTGDLNISGSEIDSARALEEIRKSTTTNSEFVSAPVRRIFNQLVSGGKVIGDRDQGRE 193

Query: 233 ---SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILY 280
               +    +    R                     IDY +       +    +      
Sbjct: 194 TPVLVDLCREYHPDRRGMYTCWEQRVNARPGNYGSRIDYVLCSLIMRDWFCASNIQ---- 249

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                   G   SDHCP+  D 
Sbjct: 250 -------EGLMGSDHCPVYADI 264


>gi|126663886|ref|ZP_01734881.1| hypothetical protein FBBAL38_10402 [Flavobacteria bacterium BAL38]
 gi|126624150|gb|EAZ94843.1| hypothetical protein FBBAL38_10402 [Flavobacteria bacterium BAL38]
          Length = 316

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 70/254 (27%), Gaps = 51/254 (20%)

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
             +L  DI+ + E  S N +           F+             + +    I      
Sbjct: 19  ILSLQPDILIVPECESENKLKFGDLTPKPNDFF---------WYGDSENKGIGIFSYSDY 69

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              L + +              R  + L V        +  I            +     
Sbjct: 70  KFELLKIF----------NPRFRFIIPLKVIGKDSSFLLFAIWA---------MDNKEKP 110

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-----NNDDFWKTIDPNDSLI 235
                 Q     ++ +      +P ++ GDFN    +       N+ D    ++  +   
Sbjct: 111 EERYIGQIWLAINYYSNLLS--LPCILTGDFNSNKIWDEKERVGNHSDMVGFLEKKNIFC 168

Query: 236 RFP--------KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +         KE     +  +       IDYF         +I++ F   +   ++   
Sbjct: 169 LYHMQENIEQGKEIHPTFHMYRKTEKPYHIDYFFAS----DLIIKDGFEIKVGKVENWID 224

Query: 288 RGKRLSDHCPISID 301
               LSDH P++++
Sbjct: 225 ----LSDHVPLTLE 234


>gi|124359529|gb|ABD32574.2| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 521

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 81/281 (28%), Gaps = 69/281 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++++S+N+  L                      +R + +  +  +V LQE       +K+
Sbjct: 1   MKILSYNVRGLGSF--------------EKRAEVRNFIREKNPFVVCLQE-------SKL 39

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + + I  S    +        +   +   +   N  +++                  
Sbjct: 40  SMVDDY-IINSIWGNVGCEYSYQASIGASGGLLTVWNPLLVEV--------WCTITFRYV 90

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +++ V    +   + +++                 C  L++Q  W++          V
Sbjct: 91  LIIKVKVLSTDQDFIIANVYAP---------------CDTLAKQDLWVRLSQFLTANGDV 135

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV-M 262
              + GDFN   +                  + F +      N   ++     ID  + +
Sbjct: 136 NVCVCGDFNYVRSEEERR----------GRNVVFRQVDADNFNNFIDISF--LID--LPI 181

Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               + +   +             +  + LSDH P+ +  D
Sbjct: 182 CGRLFTWYRGDGEQV---------AYQRGLSDHVPLVLSVD 213


>gi|167995087|ref|ZP_02576177.1| protein YafD [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|194442759|ref|YP_002039492.1| hypothetical protein SNSL254_A0283 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|195873887|ref|ZP_03080137.1| protein YafD [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197261791|ref|ZP_03161865.1| protein YafD [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|39932537|sp|Q8ZRM4|YAFD_SALTY RecName: Full=UPF0294 protein yafD
 gi|226708935|sp|B4SV34|YAFD_SALNS RecName: Full=UPF0294 protein yafD
 gi|194401422|gb|ACF61644.1| protein YafD [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|195631782|gb|EDX50302.1| protein YafD [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197240046|gb|EDY22666.1| protein YafD [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|205327162|gb|EDZ13926.1| protein YafD [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|321224912|gb|EFX49973.1| hypothetical protein SEE_01797 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323128573|gb|ADX16003.1| protein YafD [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
          Length = 266

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++ +  +R++ WNI                ++     ++L+ Y K  
Sbjct: 25  FASIGQALPAGEPLSNEERIRILVWNIF--------------KQQRAEWLSVLKNYGK-- 68

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 69  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V+++H  +F     + +     
Sbjct: 114 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYS----- 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 169 --------KQLLPIGDQIAHHSGPVIMAGDFNAW-SRPRMNALYRFAREMSLRQVRFTDD 219

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N ++      R SDH P+ +
Sbjct: 220 QRRRAFGRP-------LDFVFYRG---------------LNVNEASVLVTRASDHNPLLV 257

Query: 301 DYD 303
           ++ 
Sbjct: 258 EFS 260


>gi|148675568|gb|EDL07515.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_c [Mus musculus]
          Length = 543

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/188 (10%), Positives = 38/188 (20%), Gaps = 50/188 (26%)

Query: 149 LVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
            +E   K + +++++                    LL  +A+ L         +    +I
Sbjct: 168 TLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQMRAEALLA-------AGSHVII 220

Query: 208 AGDFNRKI--------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-- 251
            GD N                             +                     +   
Sbjct: 221 LGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGDEAGPHIGLFMDSYRYLHPKQ 280

Query: 252 ----------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                +DY + D+             I   +          SDH
Sbjct: 281 QRAFTCWSVVSGARHLNYGSRLDYVLGDRAL----------VIDTFQASFLLPEVMGSDH 330

Query: 296 CPISIDYD 303
           CP+    +
Sbjct: 331 CPVGAVLN 338


>gi|148675567|gb|EDL07514.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_b [Mus musculus]
          Length = 402

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/188 (10%), Positives = 38/188 (20%), Gaps = 50/188 (26%)

Query: 149 LVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207
            +E   K + +++++                    LL  +A+ L         +    +I
Sbjct: 27  TLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQMRAEALLA-------AGSHVII 79

Query: 208 AGDFNRKI--------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-- 251
            GD N                             +                     +   
Sbjct: 80  LGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGDEAGPHIGLFMDSYRYLHPKQ 139

Query: 252 ----------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                +DY + D+             I   +          SDH
Sbjct: 140 QRAFTCWSVVSGARHLNYGSRLDYVLGDRAL----------VIDTFQASFLLPEVMGSDH 189

Query: 296 CPISIDYD 303
           CP+    +
Sbjct: 190 CPVGAVLN 197


>gi|145294844|ref|YP_001137665.1| hypothetical protein cgR_0791 [Corynebacterium glutamicum R]
 gi|140844764|dbj|BAF53763.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 304

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/295 (7%), Positives = 57/295 (19%), Gaps = 81/295 (27%)

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           + +    D+V LQE+ +         +      +       +    +       + +  +
Sbjct: 30  WLEETRPDVVLLQEVRASEKDTATALQPALDNGWH------YIGAPAAAKGRAGVGILSR 83

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +              +    +       +   I    + V       +    S       
Sbjct: 84  HELEDV---------NIGFGSFLDSGRYIEATIKDTTLEVPVTVASLYLPSGSAGTDKQD 134

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------------- 224
                 +     + ++ Q+ +     VI GD+N         +                 
Sbjct: 135 ---EKYRFLDEFEGFLDQRAKERSHMVIGGDWNICHRREDLKNWKTNQKKSGFLPDERAF 191

Query: 225 --------------------------------WKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                                            +            + +           
Sbjct: 192 MDSVFGTFPDEATQVAGAGDFFGAVDYEGTRRREATTDPAWFDVARRLQPEGDGPYTWWT 251

Query: 253 NK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
            +           IDY        +   +          D   +   R SDH P+
Sbjct: 252 YRGKAFDTGAGWRIDYQAATAAMLERAERSWV-------DKATAYDLRWSDHSPL 299


>gi|116253229|ref|YP_769067.1| transmembrane exo/endo phosphatase family protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115257877|emb|CAK08975.1| putative transmembrane exo/endo phosphatase family protein
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 310

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 74/303 (24%), Gaps = 75/303 (24%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M+R++V            S     RL+S+NI   +   G                 +   
Sbjct: 78  MMREFV------EPSVEESRPALFRLMSFNIENDNFANGPD---------------IADM 116

Query: 61  AKNLDADIVFLQEMGS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                AD+V + E     + + ++     + I                        V  K
Sbjct: 117 VIASGADVVNILEAEPLLSELPRLLKTYPYYI------------GCGVGMEQCDTLVLSK 164

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
              +  +         +       R     ++ +G+K+  L  HL    +          
Sbjct: 165 RPLIEPR-------IRNLGLLWRNRLTISTIDFDGQKVNFLAAHLTKPYYD--------- 208

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                  +   L + I        P V+AGDFN  I                        
Sbjct: 209 --EFHGLEVWDLAEVIPTLSG---PLVLAGDFNTSILAPDVQYLMRTQ-------GLGTA 256

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             +      +     IPID+           +              +      S+H  + 
Sbjct: 257 SLEPATWPIRAGAFGIPIDHIFTRAPLRLKSV-------------RRIENGFGSNHFGLM 303

Query: 300 IDY 302
            ++
Sbjct: 304 AEF 306


>gi|298715148|emb|CBJ27836.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 753

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 64/229 (27%), Gaps = 14/229 (6%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q + +VS+N+   S    V     +V        +L +   ++ AD++ LQ++  ++   
Sbjct: 58  QTLSVVSYNVLADSNSVRVRNCAPAVTSWGRRREVLLKEIFSVRADVLCLQDVDCFHQW- 116

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                               + R + +     IA ++    + +     L          
Sbjct: 117 ---WSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDR 173

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-------LSQQAQWLKDW 194
           +          N   + +L     S     +       S             QA  L   
Sbjct: 174 SLAGKAAT-SDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQAHGLTRS 232

Query: 195 ITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
           +        +P V+ G  N      G  +   + I+  D     P  K 
Sbjct: 233 VEAFNSDFSLPIVMCGTMNCAP-SSGTYEILCRGIEAQDPARPGPPGKP 280


>gi|296234165|ref|XP_002762346.1| PREDICTED: inositol polyphosphate 5-phosphatase K-like [Callithrix
           jacchus]
          Length = 653

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 98/322 (30%), Gaps = 60/322 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81
           + +V+WN+ + +    +           SD   L     NLD  I+ LQE+ S   + ++
Sbjct: 16  IHVVTWNVASAAPPLDL-----------SDLLQLNNQNANLDIYIIGLQELNSGIISLLS 64

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                ++W  F           + S+  I   + +   + +++  LQ           F 
Sbjct: 65  DAAFNDSWSSFLMDTLSPLSFIKVSHVRIQGILLLVFAKYQHLPYLQILSTKSTPTGLFG 124

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +++ G  I +++ HL           + +        Q   ++++  Q 
Sbjct: 125 YWGNKGGVNICLKLYGYYISIINCHLPP-------HISNNYQRLEHFDQILEMQNFGGQD 177

Query: 199 KES---LVPFVIAGDFN--------------------------RKINYLGNNDDFWKTID 229
             +       +  GD N                           +++    +D   +   
Sbjct: 178 IPNILDHDLIIWFGDMNFRIEDFGLHFVRESIKNRCYSDLWEKDQLSIAKKHDPLLREFQ 237

Query: 230 PNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFVMD----QNAYKFLIQESFSEILYNE 282
               L     + D   +        R     D  +        A          +   ++
Sbjct: 238 EGRLLFPPTYKFDRNSSNYDTSEKKRKPAWTDRILWRLKRQPQAGPHTTGLPAPDFSLSQ 297

Query: 283 DDIKSR-GKRLSDHCPISIDYD 303
               S     +SDH P++  +D
Sbjct: 298 RSYGSYMTYTISDHKPVAGTFD 319


>gi|196233332|ref|ZP_03132177.1| exodeoxyribonuclease III Xth [Chthoniobacter flavus Ellin428]
 gi|196222637|gb|EDY17162.1| exodeoxyribonuclease III Xth [Chthoniobacter flavus Ellin428]
          Length = 216

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/242 (9%), Positives = 60/242 (24%), Gaps = 56/242 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+SWN+N +                         + ++ + DI+ LQE  +      V
Sbjct: 1   MKLISWNVNGIRAVLKKGF---------------TDFIESENPDILALQE--TKATPEDV 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   + S   +            ++  A+  K   +       +   D   R    
Sbjct: 44  VVPQALAEYTSFWNIA-------EKKGYSGTAIFTKTKPIAVTLGIGVAEHDREGR---- 92

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++       +++++++ +     +                + L+           
Sbjct: 93  -----VITAEYADFFLVNVYVPNSKRELTRLAYRQQWDRDFLAYLKKLEL--------KK 139

Query: 204 PFVIAGDFNRKINY---------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
           P +  GD N                           +        +  F + + +  +  
Sbjct: 140 PVIWCGDLNVAHTEIDLARPKDNVKNHGFTPEERAGFDAFVGAGFVDAFREFEKAGGHYT 199

Query: 249 KN 250
             
Sbjct: 200 WW 201


>gi|149910134|ref|ZP_01898781.1| extracellular nuclease-related protein [Moritella sp. PE36]
 gi|149806859|gb|EDM66821.1| extracellular nuclease-related protein [Moritella sp. PE36]
          Length = 710

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/391 (11%), Positives = 91/391 (23%), Gaps = 112/391 (28%)

Query: 24  VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQEMG 75
           +R+ S+N +N  +   G S       R  +         T LR     LDAD + L EM 
Sbjct: 319 LRIASFNLLNYFNRAAGGSNNPLRQNRGATTLSALRKQETQLRDTLVVLDADFIGLMEME 378

Query: 76  SY-----NAVAKVF---------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKN 120
           +      +A+ ++          P   + +    +  ++  +      I  A   R  + 
Sbjct: 379 NNGFGQHSAIRRLLDLVNQAIQDPSKHYAMVKPRKSDLHQGRYLGTGAITVAGFYRPTQL 438

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENT 176
             V  +   L   +     A +R A+        + + +   +                 
Sbjct: 439 KLVNTRVIQLPIQRSMLGNAYHRPALTPTFIRVSDNHSQSKRLTISVNHFKSKGSKCVED 498

Query: 177 YSPSC------SLLSQQAQWLKDW--------------------------ITQKKESLVP 204
              +          ++  Q L+ W                                    
Sbjct: 499 KQRAAMLKKLKRKRNEDQQSLRAWQQAKRTLAQDRQGHCAQFRTTAASVLAQALASESGS 558

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE------------------------ 240
            +I GD N               +           +                        
Sbjct: 559 KIILGDLNSYPKEDPLLVLTDYDVARYAYYKIAHSDYNYLGTTLLNTKTKTGYGYHDPFV 618

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--------- 291
                    + +    +DY ++  +    L+ +    I   E    +  ++         
Sbjct: 619 NQPDTGWTYSFKALGRLDYILLSPDLLSSLVTQKIWHINAAESHFVNNSRQSNSNRGLNN 678

Query: 292 --------------------LSDHCPISIDY 302
                                SDH P+ I+ 
Sbjct: 679 SRLGVGIGVGAMRNMASVFSSSDHEPLFIEL 709


>gi|316997353|dbj|BAJ52796.1| cytolethal distending toxin B [Campylobacter lari]
          Length = 268

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 88/307 (28%), Gaps = 53/307 (17%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M++K V  +  F +   A   +     +WN+   S         +           +RQ 
Sbjct: 1   MMKKIVFLIFSFNLLFAAL--ENYNSGTWNLQGASASTESKWNIS-----------IRQL 47

Query: 61  AKNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               +  DI+ +QE G   + A + P+    +              S++  ++      +
Sbjct: 48  VTGANPMDILAVQEAGVLPSTAIMTPRQVQPVGVGIPIHEYEWNLGSSSRPNSVYIYYSR 107

Query: 120 NVRVLQQSYPLLGAKD--------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
                 +    + ++               +R  + + +  +        IH  S    D
Sbjct: 108 VDVGANRVNMAIVSRMQADEVIVLPPPTVASRPIIGIRIGND----AFFSIHALSRGGND 163

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           +     +      +                 V ++I GDFNR        +     +   
Sbjct: 164 AGAIISAVDMHFRNM--------------PQVNWMILGDFNRPPGT--IVNLIDPDLRSR 207

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
            +++  P    +  N          IDY +   ++   L       IL        R   
Sbjct: 208 INIVAPPSFTQTGGNT---------IDYAITGNSSTTSLYSPP--RILAILAVAGLRTFL 256

Query: 292 LSDHCPI 298
            SDH P+
Sbjct: 257 ASDHFPV 263


>gi|290978740|ref|XP_002672093.1| predicted protein [Naegleria gruberi]
 gi|284085667|gb|EFC39349.1| predicted protein [Naegleria gruberi]
          Length = 1049

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 69/223 (30%), Gaps = 31/223 (13%)

Query: 92   FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151
             +  +  ++     +++    A     + V+   ++   +   D F R       +  V 
Sbjct: 800  LFQYDFQLSERLGRTSSKEQYAFLYNPEKVKF-VKTLQYIDTNDWFERPPYTFVFQSAVV 858

Query: 152  INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAG 209
             N  +  +   H+K    +D                   L +              +++G
Sbjct: 859  SNSPQFAITGCHIKPEAAVDE---------------MSKLVNVTDSYSSETFYPNVILSG 903

Query: 210  DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269
            DFN   +Y+ N+      +  +        ++     A  +       D FV+ QNA K 
Sbjct: 904  DFNAGCSYVSNSQWSQVALRTDTRFSWLISDQADTTVAVSSCPY----DRFVIFQNAAKR 959

Query: 270  LIQ-------ESFSEILYNEDDIK--SRGKRLSDHCPISIDYD 303
             I         +     ++ +     +    +SDH PI +  +
Sbjct: 960  NITTGDGFEYSNVGIFRFDSEYGFNTTYAATVSDHYPIYMSIN 1002


>gi|296138625|ref|YP_003645868.1| endonuclease/exonuclease/phosphatase [Tsukamurella paurometabola
           DSM 20162]
 gi|296026759|gb|ADG77529.1| Endonuclease/exonuclease/phosphatase [Tsukamurella paurometabola
           DSM 20162]
          Length = 353

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/326 (7%), Positives = 67/326 (20%), Gaps = 59/326 (18%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAK 82
           +R+++ N      +                   +    + +DADIV L E  +  A +  
Sbjct: 37  LRVLTINTWMNGTKVPDG------------LNRVAAVIRQVDADIVLLSEAKTATADLVP 84

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +          +T        +       T   + K  + +  ++     A   +     
Sbjct: 85  LLAAAGATYHRATSSDPGVLSKFPIASAGTLPGMAKAVIPLGDKTLVAYAAHLEYRWYAT 144

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKES 201
                    +   +      +      +  +         S               ++  
Sbjct: 145 YLPRGYGAGVPSGEFSEFGWNKIPGGPVTDVAAVQRCNDASGRPGVIDRFLADAEAERAR 204

Query: 202 LVPFVIAGDFNRKINYLG---NNDDFW-----------KTIDPNDSLIRFPKEKDSR-CN 246
               ++ GDFN            D +              +     +  +         +
Sbjct: 205 GRMVLLGGDFNEPSALDWTTGTKDLYDHNGTVVPWGSTAKLAAAGYVDAYRSTFPDPATH 264

Query: 247 ANKNL------------------RNKIPIDYFVMDQNAYKFLIQESF------------S 276
                                    +  IDY      +   +                  
Sbjct: 265 PGFTWPASNADAPVSSLTWAPDADERDRIDYLFSSPGSGLRVTGAGIVGPRASIVRSKRV 324

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
           +     +   +     +DH  +   Y
Sbjct: 325 DEPEAGEFTANPTPWPTDHKAVLATY 350


>gi|116242713|sp|Q15735|PI5PA_HUMAN RecName: Full=Phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A; AltName: Full=Inositol polyphosphate 5-phosphatase J
 gi|119580341|gb|EAW59937.1| phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A, isoform
           CRA_b [Homo sapiens]
          Length = 1006

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 79/317 (24%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      SD   +           + LQE+ S     + 
Sbjct: 425 ITVVTWNVGTAMPPDDVTSLLHLGGGDDSDGADMIA---------IGLQEVNSMLNKRLK 475

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S+  +   I +   +  ++  L+             
Sbjct: 476 DALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 535

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +    Q 
Sbjct: 536 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAQG 591

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 592 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWPILKGFQEGP 651

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              ++S    +      
Sbjct: 652 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPGGGPSPSGRKSHRLQVTQHSYR 711

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 712 SHMEYTVSDHKPVAAQF 728


>gi|145593795|ref|YP_001158092.1| endonuclease/exonuclease/phosphatase [Salinispora tropica CNB-440]
 gi|145303132|gb|ABP53714.1| Endonuclease/exonuclease/phosphatase [Salinispora tropica CNB-440]
          Length = 328

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/292 (9%), Positives = 69/292 (23%), Gaps = 66/292 (22%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
              A+    VRL++ N+                   ++D  +L    +    +++ +QE 
Sbjct: 93  TPPAATGPAVRLLTANL----------------LAGSADAEVLVDLVRRHSVEVLAVQEF 136

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +    A++       +    E         S         +  +               
Sbjct: 137 -TPAIAAELDRLGLEQLLPYRELHPVEGTPGSG--------LYARYPITEGGVRHNSNGW 187

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                 G       ++      + V  +H  +   +D + N      +            
Sbjct: 188 GFLQAYGT------VLVPEAPPVQVESVHPSAPYAIDQVGNWRRDLAAQ----------- 230

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252
                      ++AGDFN  +++        + +     +                    
Sbjct: 231 -PPATPGGQLRILAGDFNATLDHAP-----LRALLDTGYVDAADAAGVGLTGTWGPYDGD 284

Query: 253 --NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               + ID+ ++D+                            SDH  +  D 
Sbjct: 285 LIPPVTIDHVLVDRRIAVRTAAV--------------YAIPGSDHRAVLTDL 322


>gi|59712548|ref|YP_205324.1| hypothetical protein VF_1941 [Vibrio fischeri ES114]
 gi|59480649|gb|AAW86436.1| conserved protein [Vibrio fischeri ES114]
          Length = 288

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 77/292 (26%), Gaps = 64/292 (21%)

Query: 14  VPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
            P +A +    ++ ++ WNI           +K   +        L         D+V L
Sbjct: 55  FPASAPLDRNGELSVLVWNI-----------YKQQNEGWKKALIELSN-----KTDLVLL 98

Query: 72  QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131
           QE      + +      +             +     D    +    K   +   ++ ++
Sbjct: 99  QEASLTPELKEFVVNKRYSAELV--------RAFDVFDTSAGVLSLAKEQALRVCAHTVV 150

Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
              + + R      +      NG+++ V++IH  +F                     Q +
Sbjct: 151 ---EPWLRLPKSALLSEYPLSNGQELMVINIHAINFTIGTEDYQ-------------QQI 194

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
                +      P +IAGDFN       +           + L                 
Sbjct: 195 ASLSKEVSRHSGPMIIAGDFN-----TWSEARLATLRKQVEELDMKEVIFSPDERMR--F 247

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              + +D+                     +  + +S     SDH P+   + 
Sbjct: 248 MTGLALDHIFYRG---------------LDIKEARSIKSHASDHNPLQAIFS 284


>gi|2129709|pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
 gi|976278|gb|AAA75254.1| reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/284 (10%), Positives = 80/284 (28%), Gaps = 56/284 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAVAK 82
           + LVSWN   L   + +++ +    R             +   +++FL E  +  N V  
Sbjct: 1   MSLVSWNCQGLGWSQDLTIPRLMEMRL------------SHFPEVLFLMETKNCSNVVVD 48

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +     +   ++   +               I ++                        +
Sbjct: 49  LQEWLGYERVFTVNPIGLSGGLALFWKKGVDIVIKY----------------------AD 86

Query: 143 RRAVELLVEINGKKIWVLDIH-LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +  ++  ++    + +V  ++   +F     +    +       +    L D+       
Sbjct: 87  KNLIDFQIQFGSHEFYVSCVYGNPAFSDKHLVWEKITRIGINRKEPWCMLGDF------- 139

Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPIDY 259
             P +  G+         ++   +  +  +  ++  P   +      K         +D 
Sbjct: 140 -NPILHNGEKRGGPRRGDSSFLPFTDMLDSCDMLELPSIGNPFTWGGKTNEMWIQSRLDR 198

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              ++N              +   + +   KR SDH P+ +   
Sbjct: 199 CFGNKN----------WFRFFPISNQEFLDKRGSDHRPVLVRLT 232


>gi|332217995|ref|XP_003258145.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase A
           isoform 2 [Nomascus leucogenys]
          Length = 1007

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 79/317 (24%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      SD   +           + LQE+ S     + 
Sbjct: 426 ITVVTWNVGTAMPPDDVTSLLHLGGGDDSDGADMIA---------IGLQEVNSMLNKRLK 476

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S+  +   I +   +  ++  L+             
Sbjct: 477 DALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 536

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +    Q 
Sbjct: 537 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAQG 592

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 593 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWPILKGFQEGP 652

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              ++S    +      
Sbjct: 653 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPGGGPSPSGRKSHRLQVTQHSYR 712

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 713 SHMEYTVSDHKPVAAQF 729


>gi|149059817|gb|EDM10700.1| synaptojanin 1, isoform CRA_a [Rattus norvegicus]
          Length = 1316

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/354 (12%), Positives = 93/354 (26%), Gaps = 75/354 (21%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY---------------A 61
           S  +K+R+   +WN+N   +   ++    ++     D   L                  +
Sbjct: 528 SKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQGIFECLIVDKRS 587

Query: 62  KNLDADIVFLQEMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAI--- 114
           K  D   +  +EM   NA   V      +  W +        ++      ++    +   
Sbjct: 588 KPTDIFAIGFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLF 647

Query: 115 -AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
             +R ++   ++               GN+ AV + +  +   +  +  H  +       
Sbjct: 648 VFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAG------ 701

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------------ 221
           ++          + A+ L   + +   S       GDFN +I+                 
Sbjct: 702 QSQVKERNEDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDS 761

Query: 222 ----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN------------KIPIDYFVMDQN 265
               D      +       F + K +     K                    D  +  + 
Sbjct: 762 LIAGDQLINQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRR 821

Query: 266 -------------AYKFLIQESFSEILYNEDDIKSRGK---RLSDHCPISIDYD 303
                               ES     +    +   G+   + SDH P+    D
Sbjct: 822 KWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALID 875


>gi|62178824|ref|YP_215241.1| hypothetical protein SC0254 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167554228|ref|ZP_02347969.1| protein YafD [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|168232189|ref|ZP_02657247.1| protein YafD [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168238653|ref|ZP_02663711.1| protein YafD [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168239992|ref|ZP_02664924.1| protein YafD [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168819170|ref|ZP_02831170.1| protein YafD [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194449849|ref|YP_002044242.1| hypothetical protein SeHA_C0296 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194468873|ref|ZP_03074857.1| protein YafD [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194734062|ref|YP_002113275.1| hypothetical protein SeSA_A0288 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197248605|ref|YP_002145258.1| hypothetical protein SeAg_B0302 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|200390935|ref|ZP_03217546.1| protein YafD [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204927151|ref|ZP_03218353.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205360396|ref|ZP_03224611.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|238913722|ref|ZP_04657559.1| hypothetical protein SentesTe_21677 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|75484772|sp|Q57T01|YAFD_SALCH RecName: Full=UPF0294 protein yafD
 gi|226708932|sp|B5F8W7|YAFD_SALA4 RecName: Full=UPF0294 protein yafD
 gi|226708934|sp|B4TK80|YAFD_SALHS RecName: Full=UPF0294 protein yafD
 gi|226708936|sp|B4TYG5|YAFD_SALSV RecName: Full=UPF0294 protein yafD
 gi|62126457|gb|AAX64160.1| Hypothetical protein yafD [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194408153|gb|ACF68372.1| protein YafD [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194455237|gb|EDX44076.1| protein YafD [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194709564|gb|ACF88785.1| protein YafD [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197212308|gb|ACH49705.1| protein YafD [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|197288558|gb|EDY27935.1| protein YafD [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199603380|gb|EDZ01926.1| protein YafD [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204323816|gb|EDZ09011.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205321519|gb|EDZ09358.1| protein YafD [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205333425|gb|EDZ20189.1| protein YafD [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205340078|gb|EDZ26842.1| protein YafD [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205344041|gb|EDZ30805.1| protein YafD [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205349903|gb|EDZ36534.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|320084507|emb|CBY94299.1| UPF0294 protein yafD [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|322614538|gb|EFY11467.1| hypothetical protein SEEM315_17915 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620056|gb|EFY16928.1| hypothetical protein SEEM971_15626 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623351|gb|EFY20190.1| hypothetical protein SEEM973_06036 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629351|gb|EFY26130.1| hypothetical protein SEEM974_10398 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632071|gb|EFY28825.1| hypothetical protein SEEM201_09564 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637191|gb|EFY33893.1| hypothetical protein SEEM202_19074 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640304|gb|EFY36964.1| hypothetical protein SEEM954_17200 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645929|gb|EFY42449.1| hypothetical protein SEEM054_14795 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322652372|gb|EFY48726.1| hypothetical protein SEEM675_07166 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322652576|gb|EFY48926.1| hypothetical protein SEEM965_20272 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660386|gb|EFY56622.1| hypothetical protein SEEM19N_19983 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664539|gb|EFY60732.1| hypothetical protein SEEM801_06482 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669408|gb|EFY65558.1| hypothetical protein SEEM507_01365 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670954|gb|EFY67087.1| hypothetical protein SEEM877_07122 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322678807|gb|EFY74862.1| hypothetical protein SEEM867_12235 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322681836|gb|EFY77861.1| hypothetical protein SEEM180_16303 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687962|gb|EFY83928.1| hypothetical protein SEEM600_10621 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322713275|gb|EFZ04846.1| UPF0294 protein yafD [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323194316|gb|EFZ79511.1| hypothetical protein SEEM581_21429 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197732|gb|EFZ82864.1| hypothetical protein SEEM501_21520 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203472|gb|EFZ88497.1| hypothetical protein SEEM460_07580 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206783|gb|EFZ91736.1| hypothetical protein SEEM020_02514 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213398|gb|EFZ98199.1| hypothetical protein SEEM6152_07728 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323221456|gb|EGA05872.1| hypothetical protein SEEM0047_13507 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226226|gb|EGA10442.1| hypothetical protein SEEM0055_01611 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229986|gb|EGA14106.1| hypothetical protein SEEM0052_01262 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233725|gb|EGA17814.1| hypothetical protein SEEM3312_06923 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238581|gb|EGA22639.1| hypothetical protein SEEM5258_09987 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323244269|gb|EGA28278.1| hypothetical protein SEEM1156_09915 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246573|gb|EGA30548.1| hypothetical protein SEEM9199_16256 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252187|gb|EGA36040.1| hypothetical protein SEEM8282_14724 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258052|gb|EGA41731.1| hypothetical protein SEEM8283_04161 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323259850|gb|EGA43481.1| hypothetical protein SEEM8284_21765 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265135|gb|EGA48634.1| hypothetical protein SEEM8285_20619 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
          Length = 266

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 25  FASIGQALPAGEPLSSEERIRILVWNIF--------------KQQRAEWLSVLKNYGK-- 68

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 69  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V+++H  +F     + +     
Sbjct: 114 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYS----- 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 169 --------KQLLPIGDQIAHHSGPVIMAGDFNAW-SRPRMNALYRFAREMSLRQVRFTDD 219

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N ++      R SDH P+ +
Sbjct: 220 QRRRAFGRP-------LDFVFYRG---------------LNVNEASVLVTRASDHNPLLV 257

Query: 301 DYD 303
           ++ 
Sbjct: 258 EFS 260


>gi|16763641|ref|NP_459256.1| hypothetical protein STM0258 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16418757|gb|AAL19215.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|261245483|emb|CBG23273.1| Hypothetical UPF0294 protein  [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267991945|gb|ACY86830.1| hypothetical protein STM14_0303 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301156879|emb|CBW16355.1| hypothetical protein SL1344_0253 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911223|dbj|BAJ35197.1| hypothetical protein STMDT12_C02540 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|332987204|gb|AEF06187.1| hypothetical protein STMUK_0260 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 259

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++ +  +R++ WNI                ++     ++L+ Y K  
Sbjct: 18  FASIGQALPAGEPLSNEERIRILVWNIF--------------KQQRAEWLSVLKNYGK-- 61

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 62  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 106

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V+++H  +F     + +     
Sbjct: 107 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYS----- 161

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 162 --------KQLLPIGDQIAHHSGPVIMAGDFNAW-SRPRMNALYRFAREMSLRQVRFTDD 212

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N ++      R SDH P+ +
Sbjct: 213 QRRRAFGRP-------LDFVFYRG---------------LNVNEASVLVTRASDHNPLLV 250

Query: 301 DYD 303
           ++ 
Sbjct: 251 EFS 253


>gi|213162312|ref|ZP_03348022.1| hypothetical protein Salmoneentericaenterica_20883 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213616262|ref|ZP_03372088.1| hypothetical protein SentesTyp_18024 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648816|ref|ZP_03378869.1| hypothetical protein SentesTy_16923 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213855639|ref|ZP_03383879.1| hypothetical protein SentesT_16990 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289828778|ref|ZP_06546537.1| hypothetical protein Salmonellentericaenterica_19771 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|39932535|sp|Q8Z985|YAFD_SALTI RecName: Full=UPF0294 protein yafD
          Length = 266

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 25  FASIGQALPAGEPLSSEERIRILVWNIF--------------KQQRAEWLSVLKNYGK-- 68

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 69  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V+++H  +F     + +     
Sbjct: 114 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYS----- 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 169 --------KQLLPIGDQIAHHSGPVIMAGDFNAW-SRPRMNALYRFAREMSLRQVRFTDD 219

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N ++      R SDH P+ +
Sbjct: 220 QRRRAFGRP-------LDFVFYRG---------------LNVNEASVLVTRASDHNPLLV 257

Query: 301 DYD 303
           ++ 
Sbjct: 258 EFS 260


>gi|194376024|dbj|BAG57356.1| unnamed protein product [Homo sapiens]
          Length = 939

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/317 (11%), Positives = 79/317 (24%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      SD   +           + LQE+ S     + 
Sbjct: 358 ITVVTWNVGTAMPPDDVTSLLHLGGGDDSDGADMIA---------IGLQEVNSMLNKRLK 408

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S+  +   I +   +  ++  L+             
Sbjct: 409 DALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 468

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +    Q 
Sbjct: 469 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAQG 524

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 525 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWPILKGFQEGP 584

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              ++S    +      
Sbjct: 585 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPGGGPSPSGRKSHRLQVTQHSYR 644

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 645 SHMEYTVSDHKPVAAQF 661


>gi|89093847|ref|ZP_01166793.1| catabolite repression control protein [Oceanospirillum sp. MED92]
 gi|89081977|gb|EAR61203.1| catabolite repression control protein [Oceanospirillum sp. MED92]
          Length = 255

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/304 (10%), Positives = 78/304 (25%), Gaps = 74/304 (24%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++++N   + +      +                +    DAD+V +Q      A    
Sbjct: 1   MRVITFNAQGIEQATDNGFF---------------DWMVQQDADVVCIQ---DLRAKEYQ 42

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                +          +     +  D ++ +A+  +++     +       D   R    
Sbjct: 43  LDDERYHPEGYYPYFFD-----AWEDGYSGVAIYSRDIPKAIMTGLGFELCDQHGRF--- 94

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                 ++ + + + V    + S             + +   Q        + +      
Sbjct: 95  ------IQADFEHVSVSSFCVPSGL-------KSEEAQAEKEQFMTDFMGHLNKTLRKRR 141

Query: 204 PFVIAG---------DFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            F+  G         D +                +   +  D    +  F +   +    
Sbjct: 142 EFIFCGTTHIAHKPVDLSNWYANQTVSGFLPQEREWMAEIFDEMGYVDAFRQINKAERQF 201

Query: 248 NKNLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           +                +DY +   N  K +                 R +  S+H P+ 
Sbjct: 202 SWWPDYNRARKLNEGARLDYQITTANLRKNVKNAQV-----------YRDEMFSEHAPLI 250

Query: 300 IDYD 303
           IDY+
Sbjct: 251 IDYE 254


>gi|323457300|gb|EGB13166.1| expressed protein [Aureococcus anophagefferens]
          Length = 660

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 61/303 (20%), Gaps = 52/303 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S+N+    E+   +                          +V LQE+   +     
Sbjct: 157 LTVLSFNVWFEREETFGARMAAIAALAADA-------------TVVGLQEVTDDSF---- 199

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                              ++ S    +  +A +   V V    +P             R
Sbjct: 200 ---PHLQRELGRRGFGTLFRQTSIAPYYCCLASKSTLVGVETVPFP--------GSRMGR 248

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +       G    VL        F+    +    +                       
Sbjct: 249 GLLVARAAWPGVG-DVLFGVAHLESFVGREVDAAVRAERRAQVARAAATLEAKAAAHGCA 307

Query: 204 PFVIAGDFNRK-----INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
             V+ GDFN                +        S        D R N       K   D
Sbjct: 308 AAVLLGDFNWDDGKDGDAVAAAGAAWRDAWRDRGSPKASEFTYDGRANGMLKHGFKHRFD 367

Query: 259 YFVMDQNAYKF------------------LIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              +     K                   +            +   +     SDH  + +
Sbjct: 368 RVFVLDREVKRQTLDAADACAVATTGFRLVGTAQVGTRTIQHEKKGTLPMFPSDHFGVEV 427

Query: 301 DYD 303
             +
Sbjct: 428 TLE 430


>gi|238893202|ref|YP_002917936.1| hypothetical protein KP1_1068 [Klebsiella pneumoniae NTUH-K2044]
 gi|238545518|dbj|BAH61869.1| hypothetical protein KP1_1068 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 268

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 71/289 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  +K+R++ WNI                K+  +++  + +     DA +V LQE  +  
Sbjct: 42  SSDEKIRVLVWNIF---------------KQQRAEWQSVLKNFGK-DAHLVLLQEAQTTP 85

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +    N                  ++      +      V  L  ++P+        
Sbjct: 86  ELVRFATSN---------------YLAADQVPALVLPQHPSGVMTLASAHPIYCCPLRER 130

Query: 139 RAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R     LV      N + + V++IH  +F     + +             + L   
Sbjct: 131 EPILRLPKSALVTVYPLPNARLLMVVNIHAVNFSLGVDVYS-------------KQLLPI 177

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             Q      P ++AGDFN         +  ++             +   R          
Sbjct: 178 GDQIAHHSGPVIMAGDFNAW--SRPRMNALYRFAREMSLREVRFSDDQRR------RAFG 229

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            P+D+                     +  D      R SDH P+ +++ 
Sbjct: 230 RPLDFVFYRG---------------LSVHDASVLVTRASDHNPLLVEFS 263


>gi|167619814|ref|ZP_02388445.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia thailandensis Bt4]
          Length = 123

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 26/106 (24%), Gaps = 19/106 (17%)

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF--------PKEKDSRCNANKNLRNKIPI 257
           ++ GDFN                D    +  +        P       +  +     +  
Sbjct: 27  IVCGDFNSAYRSEAYRRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTGQWSEGPMTC 86

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D+  +       + +                  R SDH PI ++  
Sbjct: 87  DFAFVTDTLAHRISRCEI-----------DGATRASDHQPIVLELS 121


>gi|170113420|ref|XP_001887910.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164637271|gb|EDR01558.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1280

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/325 (12%), Positives = 81/325 (24%), Gaps = 59/325 (18%)

Query: 26   LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIV--FLQEMGSYNAVA 81
            +VSWN          S   +S+     +     +   ++    DI+    QE+    +  
Sbjct: 923  VVSWN--------CDSARPDSLNDDPINREFFNEVLNSVHPPPDIIAFGFQEVIDLESRR 974

Query: 82   KVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG--- 132
             V        K       S +    + +      I    A+ +     +  +  L+G   
Sbjct: 975  MVAKNVLLGGKKKPDDALSDKVTGAYKRWYDRLVIAVRSAMPRDVEYSVIHTESLVGLFS 1034

Query: 133  -----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC-------FLDSLENTYSPS 180
                   +          +     I    + +++ HL +            +        
Sbjct: 1035 CVFVKNTEWSQFTDVSGGIVARCVIGDSSLCLINCHLAAGQKAVRRRNADVAGMLEDRAV 1094

Query: 181  CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDF 224
             S    Q  ++              +  GD N +I++  +                +D  
Sbjct: 1095 FSPSDHQLAYVGGGDGSMVLDHEFVLFNGDMNYRIDHRRDAIIAAIRTGDLSSLLTHDQL 1154

Query: 225  WKTIDPNDSLIR--FPKEKDSRCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSE 277
             + I  N       F +         K        D                ++  S   
Sbjct: 1155 LREIKFNRGFRLRGFSEGPLLFAPTYKYDPRSNEYDTSEKRR---SPAWCDRILFRSHVA 1211

Query: 278  ILYNEDDIKSRGKRLSDHCPISIDY 302
                +   +     +SDH PIS  +
Sbjct: 1212 SRIRQLHYRRYEANVSDHRPISAAF 1236


>gi|118089331|ref|XP_420138.2| PREDICTED: similar to ocrl1 [Gallus gallus]
          Length = 911

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 69/313 (22%), Gaps = 65/313 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYNAVAKV 83
           + +WN+N  S   G+  W                       D   +  QE+         
Sbjct: 253 VGTWNVNGQSPDSGLEPWLACD---------------TEPPDFYCIGFQELDLSTEAFFY 297

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTA-------IAVRKKNVRVLQQSYPLLGAKDS 136
           F       +        H +                 +  RK  +  +++          
Sbjct: 298 FDSAKEQEWLVAVERSLHPQAKYKKVQMVRLVGMMLLVFARKDQLSNIREVMSESVGTGI 357

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             + GN+  V +    +     +++ HL +        N                     
Sbjct: 358 IGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVTPDGTLPQ 417

Query: 197 QKKESLVPFVIAGDFNRKINYLG--------------------------NNDDFWKTIDP 230
                    +  GD N ++                               +   +     
Sbjct: 418 HNIMKHDVVIWLGDLNYRLCIPDANEVKSLISKNELQKLLTYDQLNIQRIHKKAFADFIE 477

Query: 231 NDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +       + DS+ +   +          D  +            + +++ Y       
Sbjct: 478 GEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGG--------NINQLHYRSH---- 525

Query: 288 RGKRLSDHCPISI 300
              + SDH P+S 
Sbjct: 526 MDLKTSDHKPVSA 538


>gi|16759244|ref|NP_454861.1| hypothetical protein STY0279 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142981|ref|NP_806323.1| hypothetical protein t2607 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|25363861|pir||AH0533 conserved hypothetical protein STY0279 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16501535|emb|CAD08712.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138613|gb|AAO70183.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 259

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 18  FASIGQALPAGEPLSSEERIRILVWNIF--------------KQQRAEWLSVLKNYGK-- 61

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 62  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 106

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V+++H  +F     + +     
Sbjct: 107 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYS----- 161

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 162 --------KQLLPIGDQIAHHSGPVIMAGDFNAW-SRPRMNALYRFAREMSLRQVRFTDD 212

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N ++      R SDH P+ +
Sbjct: 213 QRRRAFGRP-------LDFVFYRG---------------LNVNEASVLVTRASDHNPLLV 250

Query: 301 DYD 303
           ++ 
Sbjct: 251 EFS 253


>gi|281344302|gb|EFB19886.1| hypothetical protein PANDA_019413 [Ailuropoda melanoleuca]
          Length = 338

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 65/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S N+N L+                     +  + K  D  I  LQE       A  
Sbjct: 3   LSIISINLNGLNSP--------------IKRHRVADWIKRHDPSICCLQETHFEPKDAFR 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +        +             +                           
Sbjct: 49  LRVRGWSTIFHANGPQKKAGVAILISDRLDFKLE-------------------------- 82

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 83  ---AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 134

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 135 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 193

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 194 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 233


>gi|221501825|gb|EEE27581.1| carbon catabolite repressor protein, putative [Toxoplasma gondii
           VEG]
          Length = 469

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 57/203 (28%), Gaps = 42/203 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78
           +R++++NI    +      +  S     ++ +    +R   ++L   +  LQE+   S +
Sbjct: 118 LRVMTYNILHKLDARRAKFFSYSQPANLQSETRLARVRDELRDLQPHVACLQEVERESLS 177

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSF 137
            +      + +    S           S      A+  +K     V   ++      D F
Sbjct: 178 HLTSQLECDAYACAASLFNDK------SGVSDGCALLYKKSILEVVRTHAFHFASLVDDF 231

Query: 138 SR-----------------AGNRRAVEL---LVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                                 R    +    V+  G+ + V   HL             
Sbjct: 232 FPNQKAARDHMALAFWRRLKEKRNLAVVASFRVKATGQIVHVCSTHLFWDP--------- 282

Query: 178 SPSCSLLSQQAQWLKDWITQKKE 200
                +   QA  L   + +  +
Sbjct: 283 -RQPEVKLMQAFLLARALRRYAD 304



 Score = 40.7 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 18/61 (29%), Gaps = 1/61 (1%)

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +     N     +  +DY     NA    +     +     +      +  SDH  +  D
Sbjct: 407 EEPRFTNYTRDFQGCLDYLFFR-NATVKAVLSIPDDCELKREVALPNSRFPSDHVALMAD 465

Query: 302 Y 302
           +
Sbjct: 466 F 466


>gi|56414622|ref|YP_151697.1| hypothetical protein SPA2511 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363550|ref|YP_002143187.1| hypothetical protein SSPA2342 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|207855770|ref|YP_002242421.1| hypothetical protein SEN0260 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|56128879|gb|AAV78385.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197095027|emb|CAR60573.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|206707573|emb|CAR31847.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|323214691|gb|EFZ99442.1| hypothetical protein SEEM0077_18665 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323272698|gb|EGA56105.1| hypothetical protein SEEM8287_15394 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 259

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 18  FASIGQALPAGEPLSSEERIRILVWNIF--------------KQQRAEWLSVLKNYGK-- 61

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 62  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 106

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V+++H  +F     + +     
Sbjct: 107 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYS----- 161

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 162 --------KQLLPIGDQIAHHSGPVIMAGDFNAW-SRPRMNALYRFAREMSLRQVRFTDD 212

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N ++      R SDH P+ +
Sbjct: 213 QRRRAFGRP-------LDFVFYRG---------------LNVNEASVLVTRASDHNPLLV 250

Query: 301 DYD 303
           ++ 
Sbjct: 251 EFS 253


>gi|299771689|ref|YP_003733715.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. DR1]
 gi|298701777|gb|ADI92342.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. DR1]
          Length = 369

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/251 (10%), Positives = 60/251 (23%), Gaps = 45/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
             Y LL +  + L  D++   E               W             +     D  
Sbjct: 114 DKYHLLLEQIRTLKPDLLLTLESDKT-----------WENALKEIEEDYPYRVPVPLDNL 162

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             + +  +      +   +L  +              +   +G  + +  +H K     +
Sbjct: 163 YGMHLYSRLSLSNTEVKFILSDEIPSIHT-------TVTLRSGMPVQLYCLHPKPPSPTE 215

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           + ++T   +          L     Q K+     ++ GD N            ++ I   
Sbjct: 216 AKDSTLRDA---------ELLIVGDQIKDLDESCIVMGDLNDVAWSRTTR--LFQRIS-- 262

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   +  +D+                    +    ++     
Sbjct: 263 GLLDPRVGRHFINTFHADYPLLRWSLDHIFHS--------------TDFGLVKMQRLPHI 308

Query: 292 LSDHCPISIDY 302
            SDH P+ +  
Sbjct: 309 GSDHFPVYVVL 319


>gi|262166317|ref|ZP_06034054.1| hypothetical protein VMA_002771 [Vibrio mimicus VM223]
 gi|262026033|gb|EEY44701.1| hypothetical protein VMA_002771 [Vibrio mimicus VM223]
          Length = 281

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 82/313 (26%), Gaps = 47/313 (15%)

Query: 1   MIRKYVLALV---------FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51
           M ++Y +  +         FF +    S  + V +   N          +     + +  
Sbjct: 1   MKKRYWILPILLSVVGISAFFSIFTIPSQPELVTIG-HNQQGEPLLCYQNPKPQVLDQDG 59

Query: 52  SDYTLLRQYAKNLDADI-VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110
               L+    K    +    L +  +   +  +   N    F +           +    
Sbjct: 60  QINLLVWNIYKQNRPNWQAALADFSAPQQLLLLQEANMNEAFKAWISQYGWDGTQTRAFE 119

Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCF 169
               A    N+  +  +      +        + A+     ++ + ++ V+++H  +F +
Sbjct: 120 AFGEAAGVINLAKVMPAMACAYTQLEPWLRLPKSAIYARYRLSNQQELAVVNLHAVNFTY 179

Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229
                           +Q   L D +        P ++AGDFN               + 
Sbjct: 180 GT----------QEYQEQIAALLDELRSFAG---PVIVAGDFNSW--SEARMALLSAALT 224

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
                    +  +          N +P+D+        K                     
Sbjct: 225 DIGLQAVVFESDNRTTFI-----NGLPLDHVFYRGLILKKAEA---------------PQ 264

Query: 290 KRLSDHCPISIDY 302
              SDH P+ + +
Sbjct: 265 SDASDHNPLLVSF 277


>gi|163744806|ref|ZP_02152166.1| YD repeat [Oceanibulbus indolifex HEL-45]
 gi|161381624|gb|EDQ06033.1| YD repeat [Oceanibulbus indolifex HEL-45]
          Length = 373

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 69/263 (26%), Gaps = 40/263 (15%)

Query: 44  KNSVKRTTSDYTLLRQYAKNLDAD---IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100
               + T   ++L+    K  + D   ++ L E    +    +     W          N
Sbjct: 100 PELRRETDRHFSLVAANVKKSNRDYGKLIALVEARVPDIFMAIEVDQDWIDALGDGLGKN 159

Query: 101 HSKR-DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
           + +R D        + V  K      +   L+  +    R      V       G+   +
Sbjct: 160 YDQRIDVPLQNGYGLCVMSKLPLSEVEVRELVTREVPSIRVRVHLPV-------GEDFRL 212

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
             +H +        +   S            +     + ++  +P V+ GD N       
Sbjct: 213 YVVHPEPPVIEHDTKGRDSE-----------IAMVGIEAEKDALPAVVTGDLNDVAWSTT 261

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                ++ +     L            +      + P+D+   D                
Sbjct: 262 TRR--FQRLS--GLLDPRVGRGMYNTFSATMPWMRWPLDHLFHDPQ-------------- 303

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
           +   ++    K  SDH P+    
Sbjct: 304 FRLLEMDRLDKIGSDHFPMWFVL 326


>gi|289618323|emb|CBI55047.1| unnamed protein product [Sordaria macrospora]
          Length = 1302

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 63/205 (30%), Gaps = 17/205 (8%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + + SWN+    E    S   +   R       L     +  ADI+ LQE+   + ++ +
Sbjct: 306 LSIASWNVLADFEH-SPSSNTDQEARYRLILRNLLS--ADSKADILLLQEVTD-SFLSFL 361

Query: 84  F--PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
                N+       +     S    +    + +      V + +  +       +    G
Sbjct: 362 LSPSNNSTESQLLRDHYPYVSHPPPSQPDASPLPNFLNQVILSKHPFSWSWLSFARKHKG 421

Query: 142 NRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199
           +  A    +      + + +  +HL       +         +    + Q +   + +  
Sbjct: 422 SVIAQFPTIHGNDPDRPLVLAAVHLSHGLTDMT--------VAAKKGEIQRVIGHLKENF 473

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF 224
               P+V+AGDFN   +        
Sbjct: 474 PQN-PWVVAGDFNLTSSSWTVEQAV 497


>gi|261253708|ref|ZP_05946281.1| hypothetical protein VIA_003735 [Vibrio orientalis CIP 102891]
 gi|260937099|gb|EEX93088.1| hypothetical protein VIA_003735 [Vibrio orientalis CIP 102891]
          Length = 285

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 78/284 (27%), Gaps = 64/284 (22%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
            + ++ L+ WNI           +K +                  +  +V LQE      
Sbjct: 58  QSGEINLLVWNI-----------YKQNRDNWQQSLQQFAT-----NKQLVLLQEASMTEE 101

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
           + +           + +   +        D    +        +   +      +     
Sbjct: 102 LRE--------WILAAKWFGSQVDAFKAFDTTAGVLNLS----LSAPAKACAYTELEPWL 149

Query: 140 AGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
              + A+  L  + NG+++ V++IH  +F +                     L   + + 
Sbjct: 150 RLPKSALYALYPLSNGEQLAVVNIHAVNFTYGTVEYQR-------------QLDVLVNEL 196

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           K+   P ++AGDFN             + +          +E     +        +P+D
Sbjct: 197 KKHQGPVIVAGDFNSW--SEERLKVMHQALKSVGL-----QEATYLPDHRTQFITGLPLD 249

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +                       +  ++     SDH PI + +
Sbjct: 250 HVFFRG---------------LGLEAAEAPESDASDHNPILVRF 278


>gi|167648880|ref|YP_001686543.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
 gi|167351310|gb|ABZ74045.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
          Length = 302

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 58/237 (24%), Gaps = 36/237 (15%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84
            +V+WN+                         L Q    L  D++ LQE    N    + 
Sbjct: 17  TIVTWNLRHTGADYSSPQSP------------LVQALSALRPDLMVLQETIRGNLPISL- 63

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
                                S+ D   A+      +R+  +   LL  +        R 
Sbjct: 64  -----RTLGDKPATYRSIVGRSSGDQRIAMLYNLDRMRLKTRPRNLLEGQ------MTRM 112

Query: 145 AVELLVEING----KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            +     +      + I +  + L       +              + + L  WI  +  
Sbjct: 113 PLWAHFAVIDPNAEEPIDLQVVGLHLKSRGGNNHLK-------RVAEVEALSGWILGEAP 165

Query: 201 S-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +     ++AGD+N      G                     +      ++  +   P
Sbjct: 166 NLDADLLLAGDWNGPSFDEGFEALTAIERQGGGVFRGLNGAEGVGFFMSRLRKPPHP 222


>gi|310286865|ref|YP_003938123.1| endonuclease/exonuclease/phosphatase domain [Bifidobacterium
           bifidum S17]
 gi|309250801|gb|ADO52549.1| Conserved hypothetical protein containing
           endonuclease/exonuclease/phosphatase domain
           [Bifidobacterium bifidum S17]
          Length = 390

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/296 (10%), Positives = 81/296 (27%), Gaps = 36/296 (12%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
              +      L++ N                     +    +    +    D++ LQE+ 
Sbjct: 118 PPQASGDTYHLMTLNCRY----------------GKASADAIIAAVRERHIDVLALQEL- 160

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-----NVRVLQQSYPL 130
           S + + ++       I     R +   +  ++N     I  R K     +  V   +  +
Sbjct: 161 STDLIKRLERGGLHRIL--PYRQLGTPREKTDNGGFNGIWSRTKPKRGTHGIVSIPAADV 218

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
            G         +        +   +        ++S   L  +      + +  +++A  
Sbjct: 219 PGIMLQTDDGTSVAFASAHTKSPMRGCREWSDGIRSLSALVPMPRKSVSAGTGRAERATG 278

Query: 191 LKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            K           +   V+ GD N  I++       ++ +  +        +     N  
Sbjct: 279 SKGGRDGGSAYPDVDIAVLMGDLNADIDHAS-----FRELLRSGFRDAALSQARGHVNTF 333

Query: 249 KNLRNKIPI--DYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            +      I  D+ +   + +      E    + ++  +         DH  ++  
Sbjct: 334 PSQVPWPRIELDHIMAATRESASGSAAEPARAVAFSGVESFVVEDT--DHLALTAT 387


>gi|281339895|gb|EFB15479.1| hypothetical protein PANDA_018041 [Ailuropoda melanoleuca]
          Length = 359

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 65/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S N+N L+                     +  + K  D  I  LQE       A  
Sbjct: 3   LSIISINLNGLNSP--------------IKRHRVADWIKRHDPSICCLQETHFEPKDAFR 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +        +             +                           
Sbjct: 49  LRVRGWSTIFHANGPQKKAGVAILISDRLDFKLE-------------------------- 82

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 83  ---AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 134

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 135 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 193

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 194 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 233


>gi|229109650|ref|ZP_04239236.1| hypothetical protein bcere0018_19110 [Bacillus cereus Rock1-15]
 gi|228673691|gb|EEL28949.1| hypothetical protein bcere0018_19110 [Bacillus cereus Rock1-15]
          Length = 151

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 11/134 (8%)

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S     +Q   + +WIT K       ++ GDFN     + +     K            
Sbjct: 19  KSNRKRQEQMNAVNNWITNKVSDYE--LLCGDFNDDPYSMVHQYLIRKHWIDVAQFKEIE 76

Query: 239 KE--KDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           +        +  KN   K         D+ ++ +NA         +  ++ +  + S G 
Sbjct: 77  ENMIAQPTLDYRKNPNLKGDVKQEKRYDWVMIQENAAIEF-PTIENVSIFGDSVLTSTGV 135

Query: 291 RLSDHCPISIDYDF 304
             SDH  + ++  F
Sbjct: 136 FPSDHYSVFVELKF 149


>gi|224582099|ref|YP_002635897.1| hypothetical protein SPC_0268 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254807345|sp|C0Q6M7|YAFD_SALPC RecName: Full=UPF0294 protein yafD
 gi|224466626|gb|ACN44456.1| hypothetical protein SPC_0268 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 266

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 25  FASIGQALPAGEPLSSEERIRILVWNIF--------------KQQRAEWLSVLKNYGK-- 68

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 69  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V+++H  +F     + +     
Sbjct: 114 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYS----- 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 169 --------KQLLPIGDQIAHHSGPVIMAGDFNTW-SRPRMNALYRFAREMSLRQVRFTDD 219

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N ++      R SDH P+ +
Sbjct: 220 QRRRAFGRP-------LDFVFYRG---------------LNVNEASVLVTRASDHNPLLV 257

Query: 301 DYD 303
           ++ 
Sbjct: 258 EFS 260


>gi|332535472|ref|ZP_08411255.1| hypothetical protein PH505_cu00150 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035117|gb|EGI71631.1| hypothetical protein PH505_cu00150 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 149

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 38/117 (32%), Gaps = 9/117 (7%)

Query: 1   MIRKYVLALVFF--LVPCTASVAQKVRLVSWNINTLSEQEGVSLWK-------NSVKRTT 51
           M  K +  ++    L       ++ +R+ ++N++  +        +       N++K   
Sbjct: 1   MKLKTISGVLAITALFSLNTFASESLRVATFNVSMDATNHTPKGEQVKSDALVNALKANH 60

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108
                + +  + +  DI+ L E         +   N   +    ++    +   S  
Sbjct: 61  QQIKNIAEIIQRVRPDIILLNEFDYIPKEQGIEYFNQHYLNVGQQKQAAINYPYSYI 117


>gi|281347251|gb|EFB22835.1| hypothetical protein PANDA_019649 [Ailuropoda melanoleuca]
          Length = 340

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 65/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S N+N L+                     +  + K  D  I  LQE       A  
Sbjct: 3   LSIISINLNGLNSP--------------IKRHRVADWIKRHDPSICCLQETHFEPKDAFR 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +        +             +                           
Sbjct: 49  LRVRGWSTIFHANGPQKKAGVAILISDRLDFKLE-------------------------- 82

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 83  ---AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 134

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 135 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 193

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 194 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 233


>gi|255561811|ref|XP_002521915.1| type I inositol polyphosphate 5-phosphatase, putative [Ricinus
           communis]
 gi|223538953|gb|EEF40551.1| type I inositol polyphosphate 5-phosphatase, putative [Ricinus
           communis]
          Length = 426

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 89/318 (27%), Gaps = 42/318 (13%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLDADIVFLQEMGS-----YNA 79
           + +WN+  ++  E + +          D  +L  Q    L A  V   E         + 
Sbjct: 86  VSTWNVGGIAPSEDLDMEDWLDTPNNCDIYVLGFQEIVPLRASNVLGSEKSRISMKWNSL 145

Query: 80  VAKVFPKNTWCIFYSTERLIN-----HSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
           + +   K     + + E+ I         R   +     I +    R      ++     
Sbjct: 146 IRRALNKKINHYYSNGEKEIENSNILPGFRCVISKQMVGILISVWVRSHLRPYIRHPSVS 205

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL--LSQQA 188
                  S  GN+ +V +  +++      +  HL S       ++  S    +   +   
Sbjct: 206 CVGCGIMSCLGNKGSVSVRFQLHETSFCFICSHLASGGREGDEKHRNSDVAEILLRTSFP 265

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPND 232
           +     + +K       ++ GD N +I+                    ND     +    
Sbjct: 266 RGPSLDLPRKILDHDRVILLGDLNYRISLPEATTRLLVDKKEWNSLLENDQLRMELLSGQ 325

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYF--VMDQNAYKFLIQESFSEILY-----NEDDI 285
           +   + +         K   N     YF  V  +   K+        I++      +   
Sbjct: 326 TFEGWHEGTIKFAPTYKYCPNSNV--YFGCVEGKKGEKWRAPAWCDRIVWYGEGLKQHLY 383

Query: 286 KSRGKRLSDHCPISIDYD 303
                  SDH P+   + 
Sbjct: 384 TRGEANFSDHRPVKAIFS 401


>gi|237844693|ref|XP_002371644.1| hypothetical protein TGME49_101220 [Toxoplasma gondii ME49]
 gi|211969308|gb|EEB04504.1| hypothetical protein TGME49_101220 [Toxoplasma gondii ME49]
 gi|221480916|gb|EEE19333.1| carbon catabolite repressor protein, putative [Toxoplasma gondii
           GT1]
          Length = 469

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 57/203 (28%), Gaps = 42/203 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVK---RTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78
           +R++++NI    +      +  S     ++ +    +R   ++L   +  LQE+   S +
Sbjct: 118 LRVMTYNILHKLDARRAKFFSYSQPANLQSETRLARVRDELRDLQPHVACLQEVERESLS 177

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSF 137
            +      + +    S           S      A+  +K     V   ++      D F
Sbjct: 178 HLTSQLECDAYACAASLFNDK------SGVSDGCALLYKKSILEVVRTHAFHFASLVDDF 231

Query: 138 SR-----------------AGNRRAVEL---LVEINGKKIWVLDIHLKSFCFLDSLENTY 177
                                 R    +    V+  G+ + V   HL             
Sbjct: 232 FPNQKAARDHMALAFWRRLKEKRNLAVVASFRVKATGQIVHVCSTHLFWDP--------- 282

Query: 178 SPSCSLLSQQAQWLKDWITQKKE 200
                +   QA  L   + +  +
Sbjct: 283 -RQPEVKLMQAFLLARALRRYAD 304



 Score = 40.7 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 18/61 (29%), Gaps = 1/61 (1%)

Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +     N     +  +DY     NA    +     +     +      +  SDH  +  D
Sbjct: 407 EEPRFTNYTRDFQGCLDYLFFR-NATVKAVLSIPDDCELKREVALPNSRFPSDHVALMAD 465

Query: 302 Y 302
           +
Sbjct: 466 F 466


>gi|56413770|ref|YP_150845.1| toxin-like protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197362692|ref|YP_002142329.1| toxin-like protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|56128027|gb|AAV77533.1| putative toxin-like protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094169|emb|CAR59673.1| putative toxin-like protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 269

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 83/306 (27%), Gaps = 52/306 (16%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M +     L   +    +     +   ++++WN+         S             +  
Sbjct: 1   MKKPVFFLLTMIICSYISFACANISDYKVMTWNLQG----SSASTESKWNVNVRQLLSGT 56

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117
                    DI+ +QE G+    A    ++                  + +         
Sbjct: 57  AGV------DILMVQEAGAVPTSAVPTGRHIQPFGVGIPIDEYTWNLGTTSRQDIRYIYY 110

Query: 118 KKN-VRVLQQSYPLLGAKDSFSRAGNRRAVEL---LVEINGKKIWVLDIHLKSFCFLDSL 173
               V   + +  ++  + + +    R        ++ I       L  H  +    D+ 
Sbjct: 111 SAIDVGARRVNLAIVSRQRADNVYVLRPTTVASRPVIGIGLGNDVFLTAHALASGGPDAA 170

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
                        Q + L             + +AGDFNR  + L  ND   + ++   +
Sbjct: 171 AIVRVTINFFRQPQMRHLS------------WFLAGDFNRSPDRL-ENDLMTEHLERVVA 217

Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDY-FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
           ++   +                 +DY  ++D+  Y   +            +     +  
Sbjct: 218 VLAPTEPTQISGGI---------LDYGVIVDRAPYSQRV------------EALRNPQLA 256

Query: 293 SDHCPI 298
           SDH P+
Sbjct: 257 SDHYPV 262


>gi|127512861|ref|YP_001094058.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4]
 gi|126638156|gb|ABO23799.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4]
          Length = 292

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 78/279 (27%), Gaps = 63/279 (22%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+  WNI           +K   +      + + +      ++I+ LQE        + 
Sbjct: 70  LRVGVWNI-----------YKQQKRGWQQALSKIAE-----RSEIMLLQEAKLNAGFNQY 113

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              ++  +  +           S       +           +      A + + R    
Sbjct: 114 LNGSSLHLVMAK--------AFSLLKSPVGVM---NLATEQARDACAYHAVEPWIRFAKS 162

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +      NG+ + V+++H  +F +                 Q Q +   I   +    
Sbjct: 163 TLISRYSLSNGQTLLVVNLHGINFDW----------QLKSYRAQWQQIVQKINLHQG--- 209

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GDFN          +           +    ++             +P+D+    
Sbjct: 210 PVILGGDFNTWRGQRMAYIEQLAHQLRLKEAVYEEDKRQ--------RVFGLPLDHLYYR 261

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +  ESF+              + SDH PI  ++
Sbjct: 262 G--LNLVAAESFT-------------SQASDHNPIWAEF 285


>gi|308492700|ref|XP_003108540.1| hypothetical protein CRE_10861 [Caenorhabditis remanei]
 gi|308248280|gb|EFO92232.1| hypothetical protein CRE_10861 [Caenorhabditis remanei]
          Length = 430

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 89/317 (28%), Gaps = 64/317 (20%)

Query: 23  KVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK----NLDADI--VFLQEM 74
           K+++  V+WNIN               ++       L Q  +     +D+DI  + LQE+
Sbjct: 101 KLKVCTVTWNIN---------------EKGAKVLNHLAQKIRDRNEEMDSDIFFISLQEI 145

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +         +          RL    +  S       + +R K++R   Q  PL    
Sbjct: 146 PTTAPTFHEDARRILEPLLHGHRLYLSHRAWS---QMVIVFIRHKHIRYAIQPQPLFIPS 202

Query: 135 DSFSRA-GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
            + ++    + A+ + + +  + I ++  HL        +++       L   Q      
Sbjct: 203 GTVAKPVRTKGAIGVCLRLYQRFIVLIGCHLSHATPQLRVQDYTKIVRELCFTQLAKFHG 262

Query: 194 WITQKKESLVPFVIAGDFNRK----------------------------INYLGNNDDFW 225
                  +    +  GD N +                            +    + +  +
Sbjct: 263 TQKGHIFASDVVIWTGDLNFRVTAENSVNWNDVEKLREKDYDDVLETEELANHKSKEAAF 322

Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285
              +          + +   +     R     D  +       ++    + +        
Sbjct: 323 SKFNEPPLRFPPTHKYEPDTDIYVPKRIPSFTDRVLY------WMKNSEWLQ---PIKYD 373

Query: 286 KSRGKRLSDHCPISIDY 302
             RG   SDH  +   +
Sbjct: 374 CMRGASPSDHKAVFATF 390


>gi|294885197|ref|XP_002771218.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
 gi|239874698|gb|EER03034.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
          Length = 526

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 35/145 (24%), Gaps = 25/145 (17%)

Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPND 232
               +  +   QA  + + +     S     P ++ GDFN               + P+ 
Sbjct: 372 ADVDAGDVKLWQAMCMLEVVQGWSNSQNGVLPVIVCGDFNSTPESAVYELLTTGRLSPSS 431

Query: 233 SLIRFPKEKDS---------------------RCNANKNLRNKIPIDYF-VMDQNAYKFL 270
                                               N   + +  +DY      +     
Sbjct: 432 IPDDPYGILPPVNQMHHSLPLRSIYPAVVNSEATYTNYTQKFQGTLDYICFTQNSLRGLA 491

Query: 271 IQESFSEILYNEDDIKSRGKRLSDH 295
           +  ++S    + +       + SDH
Sbjct: 492 VSNTYSYEELSAETALPSPTQPSDH 516


>gi|254375116|ref|ZP_04990596.1| endonuclease/exonuclease/phosphatase family protein [Francisella
           novicida GA99-3548]
 gi|151572834|gb|EDN38488.1| endonuclease/exonuclease/phosphatase family protein [Francisella
           novicida GA99-3548]
          Length = 239

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 98/282 (34%), Gaps = 56/282 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++K  L+SWN            +K   K + +    +R    N + DI  LQE   ++  
Sbjct: 11  SKKFCLMSWN-----------SYKIDHKDSETFSAYIRHVYFNYNVDIFCLQEAVHHHGS 59

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              FP + + I +++  ++           H  +    K +   ++S             
Sbjct: 60  K--FPIDKFDINFASNIVLRSHNYGVATVSHYPVIKNVKILTTHRESVINTH-------- 109

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             + ++   + IN  K+ V++IH  +F            S  +   + + +K++I   ++
Sbjct: 110 --KASLITHLNINNTKVIVVNIHAINF-----------KSNKVYEYEFEKIKEFIA-PEK 155

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P +IAGDFN        N    K I        F           K+ +N   +D+ 
Sbjct: 156 YKHPIIIAGDFNAW------NRKRVKLIKDFCREFCFKVAFIDEPQLVKSFQN-NHLDFV 208

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    + +                      ++SDH PI  ++
Sbjct: 209 LYRGLSLEKAAVLDCK--------------KISDHNPIIAEF 236


>gi|301765344|ref|XP_002918101.1| PREDICTED: inositol polyphosphate 5-phosphatase K-like [Ailuropoda
           melanoleuca]
          Length = 551

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 88/321 (27%), Gaps = 56/321 (17%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAV 80
            + +V+WN+ + +    +           SD   L +   NLD  ++ LQEM     + +
Sbjct: 117 SIHVVTWNVASAAPPLDL-----------SDLLQLNKDNLNLDMYVIGLQEMNCGIMSLL 165

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSYPLLGAKDS 136
           +    ++ W  F+          + S+  +        A  +    V   S         
Sbjct: 166 SDTAFEDPWSGFFMDVLSPLSFVKVSSVRMQGLLLLFFAKHQHLPFVQILSTK-STPTGL 224

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           F   GN+  + + +++ G  + +++ HL          N           + Q  +    
Sbjct: 225 FGYWGNKGGINICLKLYGYYVSIVNCHLPPHMAN----NDQRLEHFDRILEMQNFEGQDI 280

Query: 197 QKKESLVPFVIAGDFNRKINY--------------------------LGNNDDFWKTIDP 230
                    +  GD N +I+                              +D   +    
Sbjct: 281 PNILDHDLILWFGDMNFRIDDFGLHFVRESIKNQRYSDLWEKDQLSIAKRHDPLLREFQE 340

Query: 231 NDSLIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYN-----E 282
              L     + D   N        R     D  +            +   +         
Sbjct: 341 GPLLFPPTYKFDKNSNNYDTSEKKRKPAWTDRILWRLKRQPRADPHTQRLLAPRFCLSLR 400

Query: 283 DDIKSRGKRLSDHCPISIDYD 303
             +      +SDH P++  +D
Sbjct: 401 SYVSHMMYCISDHKPVTSTFD 421


>gi|254439083|ref|ZP_05052577.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 307]
 gi|198254529|gb|EDY78843.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 307]
          Length = 413

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/396 (12%), Positives = 98/396 (24%), Gaps = 124/396 (31%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEMGSYNAVA 81
             + S+N+  L   +       S     S +    + +   ++DADIV  QE+   +A+ 
Sbjct: 4   FTIASFNVKNLIGADKEYYKFQSYTPEESAWKQGWMAEQLLSMDADIVGFQEIFEEDALR 63

Query: 82  KV----------------------------FPKNTWCIFYSTERLINHSKRDSNNDI--- 110
            V                            F K  +  ++        +   ++ D    
Sbjct: 64  DVIALADTLGQASNDASIPDKSKRYHRKAIFRKLAYTPYFQNGGTTGLAFARNSADTGEA 123

Query: 111 ---HTAIAVRKKNVRV-------------------LQQSYPLLGAKDSFSRAGNRRAVEL 148
                 +A+  +   V                   L+ S     A     R  +R  ++ 
Sbjct: 124 GQRRPGVAILSRFGFVGEPEIIQDLPQPVEIPFSALRGSDTDDDAGFFRLRRLSRPILKA 183

Query: 149 LVEINGKK-----IWVLDIHLKSFCFLD--------------------SLENTYSPSCSL 183
            + I         I V + HLKS                         +       +   
Sbjct: 184 RIPIPQDHGEAQVITVFNCHLKSKLGEHVTPAGADFPPASDLTNYDPVTRALGSLRAALR 243

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------------- 221
              +A  L+  I  + ++  P ++ GDFN   + + +                       
Sbjct: 244 RMAEAWVLRREIIAELDAGNPVMVLGDFNDGEHAVSSEIISGETPFKNYAWMLRHDAQTP 303

Query: 222 -------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268
                        +D  +    +   +   K        +        ID   M ++ + 
Sbjct: 304 RDRYSDAQNLQITEDINRARLHSAEKLFVRKSARDMIYTSAFGGTFESIDQIYMSRHFHP 363

Query: 269 FLIQESFSEILYN---------EDDIKSRGKRLSDH 295
               +      ++                 K  SDH
Sbjct: 364 DYGNKIGEMEYFSALNDHLTDGSHPEAPYNKLASDH 399


>gi|196014285|ref|XP_002117002.1| hypothetical protein TRIADDRAFT_60990 [Trichoplax adhaerens]
 gi|190580493|gb|EDV20576.1| hypothetical protein TRIADDRAFT_60990 [Trichoplax adhaerens]
          Length = 281

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 74/286 (25%), Gaps = 85/286 (29%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83
           ++ SWN+N      G+  W      +         Y  + + DI+ LQE   + + +   
Sbjct: 67  KITSWNVN------GIKAWFKKNGHS---------YLTDSNIDIICLQETKCAESEIPNE 111

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              + +  ++ +     +S         T +  + K                        
Sbjct: 112 IKLDGYHTYFYSAEQKGYSS--------TGLLSKVK------------------------ 139

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +++   I    + +       F       +      +    +   +  ++   K +  
Sbjct: 140 -PLKVTFGITNIILHIK------FRTDIEKHDKEGRVITAEYDKFFLVGAYLANPKTNTK 192

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN---------K 254
                        +     + +  +     +  F     ++ +A                
Sbjct: 193 ----------TAGFTKEEREGFGKLLDCGFIDTFRHFYPNKTSAYSFWSYMSNARSKNIG 242

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
             +DYFV  +N    +                      SDHCPI +
Sbjct: 243 WRLDYFVTSKNLIPNVADSIIR-----------SEIEGSDHCPIEL 277


>gi|222641992|gb|EEE70124.1| hypothetical protein OsJ_30144 [Oryza sativa Japonica Group]
          Length = 568

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/198 (8%), Positives = 36/198 (18%), Gaps = 50/198 (25%)

Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
           V  +     + +I+        ++E              + L+              + G
Sbjct: 94  VITDHGHFVLFNIY------GPAVEEDDIERVRFKLLFYKILQRRWEHLLALGKRVFVVG 147

Query: 210 DFNRKINYLGN------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKN------- 250
           D N   + +                     +  +                          
Sbjct: 148 DLNIAPSSIDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAFRSKHPERVGAYTCFNQKV 207

Query: 251 ----LRNKIPIDYFVMDQNAYKFLIQE------SFSEILYNEDDIKSRGK---------- 290
                     ID+ ++    +                      D   RG           
Sbjct: 208 GAEVYNYGSRIDHILISGACFHHCGSVDDHSIFPCHVEECEIMDHFRRGNSENMSMWKGG 267

Query: 291 -----RLSDHCPISIDYD 303
                  SDH P+ I  +
Sbjct: 268 RSSKLEGSDHIPVYIVLN 285


>gi|328470298|gb|EGF41209.1| hypothetical protein VP10329_05857 [Vibrio parahaemolyticus 10329]
          Length = 313

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 79/302 (26%), Gaps = 66/302 (21%)

Query: 7   LALVFFLVPC----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62
           + LV  LVP      AS +Q + ++ +N+   +                 D      Y  
Sbjct: 67  ILLVSLLVPPQRSHVASCSQSLSVIQFNLFYENS----------------DINQFINYLL 110

Query: 63  NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
              AD+V +QE+            + +  +Y  +R + +            + +  ++  
Sbjct: 111 RHPADLVVMQELTPRVGSLLHMLDDVYPHYYGGQRDVGYPSN---------LMILSRHPI 161

Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182
                Y     ++            + +      I +   H  S               S
Sbjct: 162 TEVSVYRAPNGQE--------VIRAVWLPKGQAPITLFAAHPPSPRT------------S 201

Query: 183 LLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            L  Q   L   I            ++ GDFN   +        + +             
Sbjct: 202 ELWHQRNALVRTIETLTALYPEPEVLVVGDFNLS-SVSPRFSTLFPSFQTAPVTSWPTNI 260

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           K      N      I ID+  +     + +I               S   + SDH  ++ 
Sbjct: 261 K----GINVPEPMMIGIDHLWLKSEQGQRIICA----------RESSALPQGSDHRMVTT 306

Query: 301 DY 302
             
Sbjct: 307 QI 308


>gi|301618077|ref|XP_002938453.1| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like
           [Xenopus (Silurana) tropicalis]
          Length = 1185

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 75/294 (25%), Gaps = 79/294 (26%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + S+N+N L+E                    +    K  ++ IV +QE            
Sbjct: 14  VSSYNVNGLNEP--------------VKRAQIFNECKKANSKIVMIQESHFKENQTPNIN 59

Query: 86  KNTW-CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144
              +  I+ S+      +   +         + K        +          +    R 
Sbjct: 60  LKHYPHIYTSSNPEKKATGVLT--------MIHKDIPFKHIATL---------ADKEGRF 102

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            + +   +      + ++++ +                    QAQ++K ++         
Sbjct: 103 -LIIKCHMGTLICTLANVYVPN------------------QGQAQFIKQFLKILDNFKEG 143

Query: 205 FVIAG----------------DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
            +I G                  N     L      +  +   D+       K    + +
Sbjct: 144 LIIMGGDLNLVLNPVTDSSSGKSNISHKTLREVKKLFSEMQLIDAWRTQNPVKKDYTHFS 203

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           K       IDY ++ QN      Q                   LSDH PI   +
Sbjct: 204 KTHMVYSRIDYIMVSQNWLHLFTQAKI------------GNSTLSDHSPIFAKF 245


>gi|281340347|gb|EFB15931.1| hypothetical protein PANDA_015345 [Ailuropoda melanoleuca]
          Length = 340

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 65/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S N+N L+                     +  + K  D  I  LQE       A  
Sbjct: 3   LSIISINLNGLNSP--------------IKRHRVADWIKRHDPSICCLQETHFEPKDAFR 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +        +             +                           
Sbjct: 49  LRVRGWSTIFHANGPQKKAGVAILISDRLDFKLE-------------------------- 82

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 83  ---AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 134

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 135 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 193

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 194 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 233


>gi|189242136|ref|XP_001815293.1| PREDICTED: similar to ap endonuclease, partial [Tribolium
           castaneum]
          Length = 130

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 36/140 (25%), Gaps = 36/140 (25%)

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------------NNDDFWKTIDPN 231
             +  + +I    +S  P +I GD N     +                   D       N
Sbjct: 1   WNEQFEKFIK-NLDSQKPVIICGDMNVAHKEIDLANPKTNTKNAGFTVEERDGMTAFLGN 59

Query: 232 DSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNE 282
             +  +      +  A                  +DYF++ Q     +        +   
Sbjct: 60  GYVDIYRHLYPEKEKAYTFWTYMGNARAKNVGWRLDYFLVSQRFVDNVCDNIIHSDVL-- 117

Query: 283 DDIKSRGKRLSDHCPISIDY 302
                     SDHCP+S+  
Sbjct: 118 ---------GSDHCPLSLHI 128


>gi|156094081|ref|XP_001613078.1| AP endonuclease [Plasmodium vivax SaI-1]
 gi|148801952|gb|EDL43351.1| AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase),
           putative [Plasmodium vivax]
          Length = 535

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/374 (8%), Positives = 82/374 (21%), Gaps = 123/374 (32%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--------- 75
            +V+WN+N+++ +           +    +     +   ++AD++  QE+          
Sbjct: 167 TIVTWNMNSITVRY----------KNKDKWNAFMSFFNRINADVLCFQEVRLPALNLCAV 216

Query: 76  -------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--IAVRKKN 120
                                   +        +    ++     N  ++   + +++  
Sbjct: 217 KNSKEGKRDRGKVKNTDQKSQVDFDIMSKILKKDFHNYNAYFSLANIKYSGQLVLIKRNI 276

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                +    L A  S      R     ++     K ++L  +  +  F           
Sbjct: 277 PVKSIRYNLRLDADPSEHHEEGR-----VIIAEFSKFYLLSTYTPNNGFDTVKFERRRLF 331

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--------------------- 219
                   + LK +++  +      +  GD N     +                      
Sbjct: 332 D-------EQLKKFVSHLRNMGKNLIWTGDLNIAPEDIDLSHPAEFRRMKKGNVPKEFVG 384

Query: 220 -------NNDDFWKTIDPNDSLIRFPKEKDSR----------------------CNANKN 250
                     +F   +   D +  + +                           CN    
Sbjct: 385 QPGCTDFERKNFMGILSAGDLVDSYRQLAGKGKAKKGEASKGETNKGETSKGGSCNGAAT 444

Query: 251 LRNKIPIDYFV----------------------MDQNAYKFLIQESFSEILYNEDDIKSR 288
                  D                         + +     +              +  +
Sbjct: 445 NGAPDINDNIYTWRCPFLMGKSCNKAMRIDHFIVSRGFMPNVQSVDIH-----GYSVFHK 499

Query: 289 GKRLSDHCPISIDY 302
               SDHCP+ +  
Sbjct: 500 NFYGSDHCPVILHL 513


>gi|28572455|ref|NP_789235.1| integral membrane protein [Tropheryma whipplei TW08/27]
 gi|28410587|emb|CAD66973.1| putative integral membrane protein (possible nuclease activity)
           [Tropheryma whipplei TW08/27]
          Length = 350

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 75/306 (24%), Gaps = 78/306 (25%)

Query: 5   YVLALVFFLVPCTASVAQ------------KVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52
           + L+ V  ++  +   A+             + +V++N                      
Sbjct: 99  WALSGVLLIIFPSTITAESSPIQKQSIAGITLNIVAFNTQNSFTHAD------------- 145

Query: 53  DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112
               +       D DIV L E    +A                          +N+    
Sbjct: 146 ----MATLISAFDPDIVVLPETTKSDATRAA-----------------GGTAFANSVYGY 184

Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLD 171
                          +P LG     +         + ++IN +    +  +H        
Sbjct: 185 GDLYSNGIALTTIMVHPRLGGVTPITEVPEVTFGTVGLKINSRHQFRIFGVHTYPPVPN- 243

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDP 230
                      + +     L   I+  + +   P ++AGDFN  +     +         
Sbjct: 244 -----------VFNSWEWDLDRVISFGENNREGPLILAGDFNATL----RHGPLANRQRL 288

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            D+  R  +       +N     + PID+  +                 +      +   
Sbjct: 289 VDTARRCSRAPAGTWPSNLPFWLRTPIDHVFVTPE--------------FEVLKCSTMMV 334

Query: 291 RLSDHC 296
             SDH 
Sbjct: 335 GTSDHL 340


>gi|119716955|ref|YP_923920.1| hypothetical protein Noca_2730 [Nocardioides sp. JS614]
 gi|119537616|gb|ABL82233.1| hypothetical protein Noca_2730 [Nocardioides sp. JS614]
          Length = 254

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 59/197 (29%), Gaps = 16/197 (8%)

Query: 66  ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           AD++  QE+    +  K+                     +S       ++ R     ++ 
Sbjct: 61  ADVICWQEVALPQSKEKLLRS----------MRGYDHYVESGVAGQVPLSWRADRFSLVD 110

Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
               +  A    S +  R     ++   + G+ + V + H+    +    +         
Sbjct: 111 ADT-VQAAPRVKSYSPPRFITRAVLRDAVTGRLVAVYNTHMVQGAWNQRRKPFKQMRQRN 169

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNR-KINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
             + A+ L+  + +  +  +P +  GDFNR +   L       +          +   + 
Sbjct: 170 WREHARVLRRELRR-ADRDIPVLACGDFNRVRYLDLPGLAPIRRQGGRTGLDHLYRDARG 228

Query: 243 SRCNANKNLRNKIPIDY 259
                 +   N    D+
Sbjct: 229 VSARPARTEGNAGS-DH 244


>gi|239941546|ref|ZP_04693483.1| hypothetical protein SrosN15_11159 [Streptomyces roseosporus NRRL
           15998]
 gi|239988011|ref|ZP_04708675.1| hypothetical protein SrosN1_11943 [Streptomyces roseosporus NRRL
           11379]
          Length = 328

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 54/249 (21%), Gaps = 50/249 (20%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D     +      AD+V L+E+                     E+ +            
Sbjct: 125 RDPAGTARALIGSGADLVALEELVDPQ-------------VAVYEKSLAADYPHHVVRGT 171

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             +  +                ++ +SR      V  +V      +     HL S     
Sbjct: 172 VGLWSKHPLSGEQVVDIKPPSIEEGWSR-----GVRAVVHSPYGDVAAYVAHLPSVRVGV 226

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
               +     S     A  L   I    ES+   V+ GD N  +   G      +     
Sbjct: 227 GGLASQRRDES-----ASLLGRAIAG--ESVEAVVLLGDLNGVVEDRGLRPLTSQLSFAE 279

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                                  + ID  +        +     +               
Sbjct: 280 TGFAFSFPAAF----------PVVRIDQVMARSATVGHIRTLPAT--------------- 314

Query: 292 LSDHCPISI 300
            SDH P+  
Sbjct: 315 GSDHLPVVA 323


>gi|260362125|ref|ZP_05775121.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus K5030]
 gi|260898334|ref|ZP_05906830.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308094502|ref|ZP_05889652.2| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308085097|gb|EFO34792.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308090686|gb|EFO40381.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308113828|gb|EFO51368.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus K5030]
          Length = 304

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 76/305 (24%), Gaps = 68/305 (22%)

Query: 6   VLALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
            +A++F  +      +        + ++ +N+   +                 D      
Sbjct: 55  FVAILFVSLLVPPQRSHVASCSHSLSVIQFNLFYENS----------------DINQFIN 98

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           Y     AD+V +QE+            + +  ++  +R + +            + +  +
Sbjct: 99  YLLRHPADLVVMQELTPRVGSLLHMLDDVYPHYHGGQRDVGYPSN---------LMILSR 149

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +       Y     ++            + +      I +   H  S             
Sbjct: 150 HPITEVSVYRAPNGQE--------VIRAVWLPKGQAPITLFAAHPPSPRT---------- 191

Query: 180 SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             S L  Q   L   I            ++ GDFN   +        + +          
Sbjct: 192 --SELWHQRNALVRTIETLTALYPEPEVLVVGDFNLS-SVSPRFSTLFPSFQTAPVTSWP 248

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
              K      N      I ID+  +     + +I               S   + SDH  
Sbjct: 249 TNIK----GINVPEPMMIGIDHLWLKSEQGQRIICS----------RESSALPQGSDHRM 294

Query: 298 ISIDY 302
           ++   
Sbjct: 295 VTTQI 299


>gi|147820051|emb|CAN60555.1| hypothetical protein VITISV_013544 [Vitis vinifera]
          Length = 269

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 19/109 (17%)

Query: 202 LVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             P+ + GDFN  +     +           F   ID    +    +      +   N +
Sbjct: 92  DEPWCLGGDFNNTLYQGERSRQGRITSNMRRFAHIIDDLGLVDLPLQGGVFTWSGGLNNQ 151

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +   +D F++  +            +              SDH PI ++
Sbjct: 152 SWARLDRFLVTPSXLDXFSGVIQRRLPRPV----------SDHFPILLE 190


>gi|229823391|ref|ZP_04449460.1| hypothetical protein GCWU000282_00689 [Catonella morbi ATCC 51271]
 gi|229787166|gb|EEP23280.1| hypothetical protein GCWU000282_00689 [Catonella morbi ATCC 51271]
          Length = 271

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 87/297 (29%), Gaps = 52/297 (17%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + L+SWNI     +  +               ++ +     + DI    E  + N+   +
Sbjct: 5   MSLLSWNIRCQGGKFPIH-------------KVVLETTLKQNKDINIFTEFTNNNSQDFI 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                      +   I      S +  H  + +  K   + + +   +   D      N 
Sbjct: 52  QG-------LWSNGYIPCGSDKSYSPGHNDVLIAIKKEIISENTSLNIDWFDESLDYPN- 103

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +++ ++ +   + ++ + ++               C    +Q   L  ++   +    
Sbjct: 104 -FLKVTLKDDDLTLHIIGVRVRIGDGG-------IKDCKYRKKQIDNLLSYLKTLEGK-- 153

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP---------KEKDSRCNANKNLRNK 254
             +++GDFN   +   +  + +K  +       +P                    +    
Sbjct: 154 -IILSGDFNNLKHNDSDTIETYKNKNLVREFYSYPIIKQEFNNNDFTLITPKHGISWYGG 212

Query: 255 IP----IDYF-----VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 +D+       +    Y +   ES     Y  ++ K+ G    DH  +  D 
Sbjct: 213 HFVQCKLDHIIGKNVYISNEEYDWRFLES--VGKYKANEKKTDGSFGPDHAILLADI 267


>gi|118498306|ref|YP_899356.1| hypothetical protein FTN_1751 [Francisella tularensis subsp.
           novicida U112]
 gi|194323890|ref|ZP_03057665.1| endonuclease/exonuclease/phosphatase family protein [Francisella
           tularensis subsp. novicida FTE]
 gi|208780130|ref|ZP_03247473.1| endonuclease/exonuclease/phosphatase family protein [Francisella
           novicida FTG]
 gi|254371974|ref|ZP_04987467.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118424212|gb|ABK90602.1| conserved hypothetical protein [Francisella novicida U112]
 gi|151569705|gb|EDN35359.1| conserved hypothetical protein [Francisella novicida GA99-3549]
 gi|194321787|gb|EDX19270.1| endonuclease/exonuclease/phosphatase family protein [Francisella
           tularensis subsp. novicida FTE]
 gi|208744134|gb|EDZ90435.1| endonuclease/exonuclease/phosphatase family protein [Francisella
           novicida FTG]
 gi|332679043|gb|AEE88172.1| conserved hypothetical protein [Francisella cf. novicida Fx1]
          Length = 239

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 97/282 (34%), Gaps = 56/282 (19%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           ++K  L+SWN            +K   K + +    +R    N + DI  LQE   ++  
Sbjct: 11  SKKFCLMSWN-----------SYKIDHKDSETFSAYIRHVYFNYNVDIFCLQEAVHHHGS 59

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
              FP + + I +++  ++           H  +    K +   ++S             
Sbjct: 60  K--FPIDKFDINFASNIVLRSHNYGVATVSHYPVIKNVKILTTHRESVINTH-------- 109

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             + ++   + IN  K+ V++IH  +F            S  +   + + +K++I   ++
Sbjct: 110 --KASLITHLNINNTKVIVVNIHAINF-----------KSNKVYEYEFEKIKEFIA-PEK 155

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P +IAGDFN    +        K             ++     + +N      +D+ 
Sbjct: 156 YKHPIIIAGDFN---TWNRKRVKLIKDFCREFCFKVAFIDEPQLVKSFQN----NHLDFV 208

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +    + +                      ++SDH PI  ++
Sbjct: 209 LYRGLSLEKAAVLDCK--------------KISDHNPIIAEF 236


>gi|302530756|ref|ZP_07283098.1| predicted protein [Streptomyces sp. AA4]
 gi|302439651|gb|EFL11467.1| predicted protein [Streptomyces sp. AA4]
          Length = 317

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/285 (11%), Positives = 78/285 (27%), Gaps = 66/285 (23%)

Query: 17  TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
            A+  + VR+++ N+  L                 +D   L +  +    D++ L EM +
Sbjct: 95  PAAQGKTVRVLAANL-YLG---------------QADPAALVRLVREQRIDVLNLLEM-T 137

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
             A++ +     +                S                 +   YPL     +
Sbjct: 138 PAAMSGLEKAGLFQTLPYRVLHPASGVDGSG----------------IVSRYPLTEEDYT 181

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              A  +      +   G  + ++  H +S                    Q +     ++
Sbjct: 182 GDSAQKQPGAAADL-GGGTTLELVAAHPRSPDSG--------------YYQWEQEMRDLS 226

Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
           +        V+AGDFN  +++        +                    +       +P
Sbjct: 227 RAIGEHGLRVVAGDFNATLDHAALRTVLSRGYVDAAE---ARGAGLVPTWSTSA-VPLVP 282

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
           +D+ ++D+                   D ++     SDH  +  +
Sbjct: 283 LDHVLVDRRVAIR--------------DYRAFDVPGSDHRAVYAE 313


>gi|284009091|emb|CBA76073.1| endonuclease/exonuclease/phosphatase family protein [Arsenophonus
           nasoniae]
          Length = 262

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 85/290 (29%), Gaps = 73/290 (25%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S + ++ +VSWNI           +K       S    L      +D  ++ LQE  +  
Sbjct: 39  SESDELSIVSWNI-----------YKQQRPNWYSVLNKLV-----IDKHLILLQEAQTSP 82

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +             S   + +           + +         L  S+P+        
Sbjct: 83  QLID--------FVVSQHLVADQVPAIVFPQHASGVM-------TLATSHPIYCCPLREK 127

Query: 139 RAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R     L+ +    NG+ + +++IH  +F F   + +               L + 
Sbjct: 128 EPLLRLPKSALITVYPLHNGQNLMIINIHAVNFSFGVDIYSR-------------QLHNI 174

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRN 253
               K    P V AGDFN             + I+      R  + K+   + + + +  
Sbjct: 175 GEHIKRHQGPVVFAGDFNT---------WSRQRINALKRFTRSLRMKEVNFDPDVRTIIF 225

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             P+DY          L  E                   SDH PI + + 
Sbjct: 226 GYPLDYVFYRS--LTLLDAEVIKTES-------------SDHNPICVKFS 260


>gi|302346392|ref|YP_003814690.1| putative exodeoxyribonuclease III [Prevotella melaninogenica ATCC
           25845]
 gi|302150873|gb|ADK97134.1| putative exodeoxyribonuclease III [Prevotella melaninogenica ATCC
           25845]
          Length = 253

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 70/277 (25%), Gaps = 71/277 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R++SWN   +                      L+Q  ++   DIV LQE      +   
Sbjct: 1   MRIISWNTFGIRT----------------ALPNLQQMLESCTPDIVCLQETKVRT-LYAN 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
           F    +  +++      H             A+  K+  ++  +Y               
Sbjct: 44  FDFKGYRQYWNESTDFAH----------LGTALLSKSSSLIAVTYDNFNVYYDKGN---- 89

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
                ++    K+I+V+ +++       +  +               L+           
Sbjct: 90  -----VIVTELKEIYVVCVYVPYAGATATTRDNRHHWYKCFQSLIHQLQQ--------NK 136

Query: 204 PFVIAGDFNR-----------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-C 245
           P VI GDFN                           +  + +     +  +     S   
Sbjct: 137 PCVICGDFNVVQQDIDAWDKAVINTSLACFSKEERAEIGRFVQEEQLIDVYRYLYPSTKS 196

Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQE 273
                               ID F++ +     ++  
Sbjct: 197 EGFTYFPFGSDYRKNKKGYRIDLFLISKQLISKVVDC 233


>gi|77555695|gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 36/117 (30%), Gaps = 23/117 (19%)

Query: 200 ESLVPFVIAGDFNRKINYLGNN----------DDFWKTIDPNDSLIRFPKEKDSRCNANK 249
               P+++AGDFN  +                D+F   +          +        + 
Sbjct: 373 NPTTPWLMAGDFNEILFSHEKQGGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHS 432

Query: 250 NLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           + +    +  +D  V +               ++    + +   R SDH P+ I+ +
Sbjct: 433 HSQEGYIRERLDRAVANPE----------WRAMFPAARVINGDPRHSDHRPVIIELE 479


>gi|86356381|ref|YP_468273.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
 gi|86280483|gb|ABC89546.1| probable exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
          Length = 90

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 28/95 (29%), Gaps = 17/95 (17%)

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKF 269
                 ++ ++ N  L    +              +           ID+ ++   A   
Sbjct: 2   PQTRQAFRRLE-NLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADR 60

Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
           +   +  + +          ++ SDH P+   +DF
Sbjct: 61  MTSAAIEKHV-------RAWEKPSDHVPVIAYFDF 88


>gi|296004482|ref|XP_002808607.1| carbon catabolite repressor protein 4, putative [Plasmodium
           falciparum 3D7]
 gi|224591373|emb|CAX51189.1| carbon catabolite repressor protein 4, putative [Plasmodium
           falciparum 3D7]
          Length = 322

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/323 (13%), Positives = 99/323 (30%), Gaps = 48/323 (14%)

Query: 21  AQKVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
             K+R+ + NI      + +E +S++            LL ++      DI+ LQE+ S+
Sbjct: 4   GNKIRVGTINIFNSAWYTIKEKLSVYPFEYNYNIDRKNLLYKHFFYNKLDIICLQEVDSF 63

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
                            T   +N           T  +V K  ++   +S   +      
Sbjct: 64  MINDLKKKFFDHDFILHTPEHVNTKSPKREKQFDTETSVIKNLIKYSSESGCEIQDAFLR 123

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
             +  +    +++    K+ ++   +          +     +  ++    +++++ +  
Sbjct: 124 ELSKRKSIANMVILELSKQTYLGICNCHIHWNPLYPDIKLYHAYLIIRDFYEFIQNTVQD 183

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFW-----------------------KTIDPNDSL 234
                +P ++ GDFN   +     +D                           +  +++ 
Sbjct: 184 IPF--IPLLLIGDFNSTPHIDHKKEDEIIQASGVYELITTGRISKNHAHHPARLRKSEAF 241

Query: 235 IRFPKEKDSRC-------------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
             +P+ K                   NK    +  IDY        K LI  S   I  N
Sbjct: 242 YSYPELKIPPFKSVFKEINGKEPEFTNKTPSFEGCIDYIFY-----KELIPISTETIPRN 296

Query: 282 EDDI--KSRGKRLSDHCPISIDY 302
             DI         SDH  ++ ++
Sbjct: 297 LKDIKMLPNEHFPSDHIMLTSEF 319


>gi|316997333|dbj|BAJ52779.1| cytolethal distending toxin B [Campylobacter lari]
 gi|316997339|dbj|BAJ52784.1| cytolethal distending toxin B [Campylobacter lari]
 gi|316997345|dbj|BAJ52789.1| cytolethal distending toxin B [Campylobacter lari]
 gi|316997361|dbj|BAJ52803.1| cytolethal distending toxin B [Campylobacter lari]
          Length = 268

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 92/302 (30%), Gaps = 43/302 (14%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M++K V  +  F +   A   +     +WN+   S         +           +RQ 
Sbjct: 1   MMKKIVFLIFSFNLLFAAL--ENYNSGTWNLQGASASTESKWNIS-----------IRQL 47

Query: 61  AKNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
               +  DI+ +QE G   + A + P+    +              S++  ++      +
Sbjct: 48  VTGANPMDILAVQEAGVLPSTAIMTPRQVQPVGVGIPIHEYEWNLGSSSRPNSVYIYYSR 107

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENT 176
                 +    +        +  R    +++       + I  + I   +F  + +L   
Sbjct: 108 VDVGANRVNMAIV-------SRTRADEVIVLPPPTVASRPIIGIRIGNDAFFSIHALSRG 160

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
            + + ++       +           V ++I GDFNR        +     +    +++ 
Sbjct: 161 GNDAGAI----ISAVDMHFRNM--PQVNWMILGDFNRPPGT--IVNLIDPDLRSRINIVA 212

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            P    +  N          IDY +   ++   L       IL        R    SDH 
Sbjct: 213 PPSFTQTGGNT---------IDYAITGNSSTTSLYSPP--RILAILAVAGLRTFLASDHF 261

Query: 297 PI 298
           P+
Sbjct: 262 PV 263


>gi|78777355|ref|YP_393670.1| hypothetical protein Suden_1157 [Sulfurimonas denitrificans DSM
           1251]
 gi|78497895|gb|ABB44435.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 243

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 82/282 (29%), Gaps = 59/282 (20%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           +Q+  L+ WN+  L+ +     + +S                    DI+ LQE+     +
Sbjct: 19  SQEFNLLCWNVAKLTLKSSYKEFVDS-------------LIHEHKLDILLLQEV--KKHL 63

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           +       +    S                     V             LL  K     A
Sbjct: 64  SHEIELQDYSYVLSPNIETKKHI----------FGVLSAFKTSCHSERSLLSKKQELRYA 113

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            ++ ++    +I+ ++  +L  +L +  F+ S +  +             L +     K 
Sbjct: 114 THKTSLITYHKISNEQ-TLLIANLHAINFVKSSDFKH------------ELDELHVGIKN 160

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++AGDFN    +      + +    +  L +   + +              +DY 
Sbjct: 161 HQGAMIVAGDFN---TWSAKRVSYLREFSSSLELKQVDFKNEKD----IKRVFSNTLDYI 213

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                    L+     +            K++SDH PI   +
Sbjct: 214 FYRG---VELVSSIVVD-----------SKKISDHNPIIAKF 241


>gi|115637309|ref|XP_797626.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115934445|ref|XP_001189614.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 569

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 61/205 (29%), Gaps = 17/205 (8%)

Query: 23  KVRLVSWNIN-----TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           +  +VS+NI        ++       ++ +        L R   +  +  ++ LQE+ S 
Sbjct: 187 EFSIVSYNILAQCLLNANKHLYSHCDRDILPWDH----LFRNVIRITN--VICLQEVESR 240

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
           +      P      + S      + KR  +     A   R    + +  S          
Sbjct: 241 HFQDFFKPALEARGYASI-----YKKRTCDKGDGCATFYRTSCFQEVSHSKLEYQRGIGL 295

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
               N   V +L          L +      +     +       LL  + + L +   +
Sbjct: 296 LDRDNVAIVVMLQPRGLSSSHQLCVANTHLLWNPRRGDIKLAQLGLLFAEIERLSNTNQE 355

Query: 198 KKESLV-PFVIAGDFNRKINYLGNN 221
             E+   P V+ GDFN   +     
Sbjct: 356 STENTYHPLVLCGDFNSVPHSPLYK 380


>gi|147865117|emb|CAN84100.1| hypothetical protein VITISV_012063 [Vitis vinifera]
          Length = 1282

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/280 (11%), Positives = 74/280 (26%), Gaps = 61/280 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           V+++ WN+   ++               S   +++ + +N   D++ +QE         +
Sbjct: 517 VKILXWNVRGANDS--------------SKKKVIKTFIRNQRVDLICIQETKIQXMSDSI 562

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                   F   + +               I +      +           D       +
Sbjct: 563 ARSLGSGRFLDWKAVNAEGASG-------GILICWDRRSL-----------DIXDWEEGQ 604

Query: 144 RAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             +      +    IWV       F  ++        +        + L +         
Sbjct: 605 FTLSCRFRNVENGAIWVFTGVYGPFSKVE------RDALWEEFGAIRGLWE--------- 649

Query: 203 VPFVIAGDFNRKIN---------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253
            P+ + GDFN  +                 F + +D    +       +   N  +N + 
Sbjct: 650 DPWCLGGDFNITLFPRERSSQRRISSAMRKFAEIVDDLGLVDLPLHGGEFTWNGGQNNQA 709

Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293
              +D F+M  +        +   +   E       ++LS
Sbjct: 710 WARLDRFLMSPSWIDQFSGINQCRLPRPE----XHWRQLS 745


>gi|134082|sp|P21329|RTJK_DROFU RecName: Full=RNA-directed DNA polymerase from mobile element
           jockey; AltName: Full=Reverse transcriptase
 gi|157772|gb|AAA28649.1| ORF2; putative [Drosophila funebris]
          Length = 916

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 68/248 (27%), Gaps = 47/248 (18%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             LR +    + D++ + E           P   +  ++      N     S       +
Sbjct: 21  EELRLFLSVHNIDVMLVTESHMREGQRIFLPG--YSTYHVFHPSGNSRGGAS-------V 71

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            VR           P +   D       R+   + ++     + +  ++L          
Sbjct: 72  IVRSSI---SHSPQPPISTND-------RQIAYIQLQTAEGPVVLAAVYLPP-------- 113

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234
                      +  +   ++ +        F+  GD+N K  + GN+    +     + +
Sbjct: 114 ---------RERWIRA--EFESLFAVLGNKFIAGGDYNAKHAWWGNSRACARGKVLQEVV 162

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
                +  +         N       ++  +A  F +   +     N   +       SD
Sbjct: 163 ANGQYQILATGEPTFYSYNP------LVSPSALDFFVVNGYDMRRLNVQTLHELS---SD 213

Query: 295 HCPISIDY 302
           H P+  D 
Sbjct: 214 HTPLLADL 221


>gi|299856846|pdb|3MTC|A Chain A, Crystal Structure Of Inpp5b In Complex With
           Phosphatidylinositol 4- Phosphate
          Length = 313

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 75/312 (24%), Gaps = 50/312 (16%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVF 84
           ++ I       G         +       L    +  D   V  QE+             
Sbjct: 3   TY-IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTP 60

Query: 85  PKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRA 140
            +  W    S     +             I     V++++   + +            R 
Sbjct: 61  KEEEWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 120

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           GN+  V +  + +   I V++ HL +        N          Q  Q           
Sbjct: 121 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 180

Query: 201 SLVPFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDS 243
           +    +  GD N +I  L                    D     +        F + + +
Sbjct: 181 NHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELT 240

Query: 244 RCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                K              R     D  +           ++ +++ Y          +
Sbjct: 241 FQPTYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALK 288

Query: 292 LSDHCPISIDYD 303
            SDH P+S  +D
Sbjct: 289 TSDHKPVSSVFD 300


>gi|218508818|ref|ZP_03506696.1| exodeoxyribonuclease III protein [Rhizobium etli Brasil 5]
          Length = 126

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 44/146 (30%), Gaps = 28/146 (19%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +++ +WNIN                   +    L Q+ K+ D DIV LQE+ +   + + 
Sbjct: 1   MKIATWNING----------------VKARIDNLTQWLKDSDPDIVCLQEIKT---IDEG 41

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN- 142
           FP+            + +            +A+  K+             +         
Sbjct: 42  FPRLE-------IEALGYHVETHGQKGFNGVAILSKSSPSEVNRGLARAMRWDKQARFPS 94

Query: 143 -RRAVELLVEINGKKIWVLDIHLKSF 167
            R      + ++ +   +L     + 
Sbjct: 95  RRGFTPARIPVSWRVCCILPAQTGNP 120


>gi|104784334|ref|YP_610832.1| catabolite repression control protein Crc [Pseudomonas entomophila
           L48]
 gi|95113321|emb|CAK18049.1| putative catabolite repression control protein Crc [Pseudomonas
           entomophila L48]
          Length = 259

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/274 (9%), Positives = 71/274 (25%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDAEVPTQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       +       D + R          ++ +  K+ +  + L S    D   
Sbjct: 69  ALYSRMQPKAVITGLGFETADRYGRY---------LQADFDKVSIATLLLPSGMNGDD-- 117

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF----------------NRKINYL 218
                  +   +       ++ +++     ++  G F                       
Sbjct: 118 -----DLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSVGFLP 172

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFL 270
                          +    +        +    N+           DY ++     +F+
Sbjct: 173 PERAWMDAITGDMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RNA-----------RLPRQPRFSRHAPLIVDYDW 255


>gi|332017070|gb|EGI57869.1| CCR4-NOT transcription complex subunit 6 [Acromyrmex echinatior]
          Length = 243

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 38/111 (34%), Gaps = 6/111 (5%)

Query: 24  VRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
             ++ +N+  +  + ++      +           +    ++  ADI+ LQE+ +     
Sbjct: 65  FTVMCYNVLCDKYATRQMYGYCPSWALDWEYRKKGILDEIRHYAADIISLQEVETDQFYN 124

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQSY 128
              P+     +       + +K  + ND       AI  R     ++++  
Sbjct: 125 FFLPELKHDGYDGIFSPKSRAKTMAENDRKYVDGCAIFYRTAKFSLIKEHL 175


>gi|126327956|ref|XP_001369548.1| PREDICTED: similar to inositol polyphosphate phosphatase-like 1,
           [Monodelphis domestica]
          Length = 1236

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 84/306 (27%), Gaps = 43/306 (14%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + ++ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 409 IGTWNMGSVPPPKNITSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 466

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                         +       S  +I  A+ V+ ++   +             +  GN+
Sbjct: 467 RGGLKDLTDLDYRAIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNK 522

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQKK 199
            AV +    NG     ++ HL S     +  N        L     +Q       +    
Sbjct: 523 GAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLSAFDMSLRF-- 580

Query: 200 ESLVPFVIAGDFNRKINYL----------GNNDDFWKT----IDPNDSLIRFPKEKDSRC 245
                    GD N +++               +   +     ++     +     ++   
Sbjct: 581 ---THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEIS 637

Query: 246 NANKNLRNKIPID-YFVMD----------QNAYKFLIQESFSEILYNEDDIK-SRGKRLS 293
                   +   D Y               +    ++ +S+ E   N +    +     S
Sbjct: 638 FPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILWKSYPETHINCNSYGCTDDIVTS 697

Query: 294 DHCPIS 299
           DH P+ 
Sbjct: 698 DHSPVF 703


>gi|320531711|ref|ZP_08032649.1| endonuclease/exonuclease/phosphatase family protein [Actinomyces
           sp. oral taxon 171 str. F0337]
 gi|320136075|gb|EFW28085.1| endonuclease/exonuclease/phosphatase family protein [Actinomyces
           sp. oral taxon 171 str. F0337]
          Length = 399

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/295 (11%), Positives = 68/295 (23%), Gaps = 57/295 (19%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
              A  V ++S N                  R  +D   + + A  + ADI+ L E    
Sbjct: 144 PVDAGAVSVLSLNTE----------------REGADIEAVAELADAVGADILVLPETTQR 187

Query: 78  NAVAKVFPKNTWCIFYSTERLI---------NHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
                             +                 +   D ++  A     V V  +  
Sbjct: 188 YGRRLAEALTEQKKESGAQPQGFAVFSDTSMPSDLAEQGIDQNSDPAY-STTVLVATRLG 246

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
                +++         V L  E     + V                        ++   
Sbjct: 247 GYRQVEETAGSGF--GTVRLEPESGDGPVIVGAHTYPPLPG-------------AMTWWR 291

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248
             + D  +  +      ++AGDFN   ++    +     I   +                
Sbjct: 292 SSVTDVASLCRRPSAGLIVAGDFNATRDHAPLRN-LGGCISAGEQAGIGGLATWPSSTGT 350

Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             L     ID+ ++D   ++       +                 DH  + +   
Sbjct: 351 TLLG--ATIDHVLVDGTVWEGKKGRVVTIPGT-------------DHRAVVVQLS 390


>gi|171920292|ref|ZP_02931644.1| endonuclease/exonuclease/phosphatase family [Ureaplasma parvum
           serovar 1 str. ATCC 27813]
 gi|171902705|gb|EDT48994.1| endonuclease/exonuclease/phosphatase family [Ureaplasma parvum
           serovar 1 str. ATCC 27813]
          Length = 433

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/317 (9%), Positives = 76/317 (23%), Gaps = 61/317 (19%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------- 74
           + +R+  WN+                         L +     + D++ L E+       
Sbjct: 71  KTIRVGHWNVLN------------QGGINQLKNEALAKVILKSNVDVIALTEINSAKNNG 118

Query: 75  -GSYNAVAKVFPKNTWCIFYSTERLINH-------SKRDSNNDIHTAIAVRKKNVRVLQQ 126
                  A +   + +   +      N+       SK + +         +   ++ +Q+
Sbjct: 119 HDDLPMHAILKELDLYKNQFDQTANWNYVLSKNLFSKGNESQTERIGFFYKANIIKPVQE 178

Query: 127 SYP------------LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
                               D+   + +R       +    K     +         +  
Sbjct: 179 YIYKNDNKDILFEQYFKNTNDNTKISYSRPPYAYKFQTLDNKFNFTIVASHLDSPGANEH 238

Query: 175 NTYSPSCSL-----------------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217
            +     +                   + Q   + D+I +   +    +  GD N K   
Sbjct: 239 KSSKHDHTYGNKNLKINIKQGSKELNEAYQLGNVMDYIDRLDGNNDDLIFVGDTNIKTKN 298

Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKD--SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275
                  + ++   D    F  + +      A   L+     D      +       +  
Sbjct: 299 EL---GAFASLYKRDYSSNFKDDNENNKTTLAKTYLKYAQHYDKIFTSPSIKVLNTYKYD 355

Query: 276 SEILYNEDDIKSRGKRL 292
              +   D +  +  +L
Sbjct: 356 LWSVSLTDTLLDKNWKL 372


>gi|67467066|ref|XP_649653.1| inositol polyphosphate 5-phosphatase [Entamoeba histolytica
           HM-1:IMSS]
 gi|56466138|gb|EAL44267.1| inositol polyphosphate 5-phosphatase, putative [Entamoeba
           histolytica HM-1:IMSS]
          Length = 797

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/323 (12%), Positives = 88/323 (27%), Gaps = 65/323 (20%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL--QEM 74
           ++A+++++   +WNIN           +  V + TS          +   DIV L  QE+
Sbjct: 160 AIAKELKIQICTWNIN------QGLYDQEIVDKWTS--------LLSEKPDIVALGVQEL 205

Query: 75  G-SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             S +A+      +     +      + ++   N    +        V  +     +   
Sbjct: 206 DMSVDAIITGKKYSERAEQWKDVICKSVNRNGGNEYDESGWYQLCGIVLFVFVHKHIKSQ 265

Query: 134 KDSFSRAGNR-RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
              F  +  R  A+   +   G     + I+  + CF++S    +   C   ++  + + 
Sbjct: 266 IKMFGLSECRTGAMSGKLANKGGVAIGMKIYDSTICFVNSHLAAHQEFCERRNKDWEEIS 325

Query: 193 DW----------ITQKKESLVPFVIAGDFNRKINYLG----------------------- 219
                       ++         +  GD N +I+                          
Sbjct: 326 KMKIKYYNGTSSLSIPLLQHDVVIWMGDLNYRIDMEDSEVRKLVQEKDLTTLYRNDQLFN 385

Query: 220 --NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277
                  ++             +         + R     D  +        +I      
Sbjct: 386 SRIKKKVFQNFKEAKITFLPTFKIKIGNGEYVDNRIPSWCDRVLYKTERRHGVI------ 439

Query: 278 ILYNEDDIKSRGKRLSDHCPISI 300
                +   S     SDH P+S 
Sbjct: 440 ----VEKYTSFELYNSDHKPVSA 458


>gi|307545599|ref|YP_003898078.1| endonuclease/exonuclease/phosphatase [Halomonas elongata DSM 2581]
 gi|307217623|emb|CBV42893.1| endonuclease/exonuclease/phosphatase [Halomonas elongata DSM 2581]
          Length = 354

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 63/251 (25%), Gaps = 44/251 (17%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            +   L +  +    DIV   E   +          +           N       + + 
Sbjct: 111 RNAEGLIELIRRHSPDIVLTLESDDWWGQQLDTALASQWPHAVRIPQDNLYGMHLYSRLP 170

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
               V  +  R++Q   P +    +                 G  I +  +H +     +
Sbjct: 171 ---LVSPRVERLIQDDIPSISTGITLPC--------------GDDIQLYAVHPRPPAPNE 213

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
           S E+ +  +          L     +  ++ VP ++AGD N              +    
Sbjct: 214 SEESLWRDA---------ELLLIGKRIHDAPVPTLVAGDLNDVAWSRTTRLFCRIS---- 260

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
             L                   + P+D+    ++                  D++     
Sbjct: 261 GMLDPRRGRGMFSTFHAHYPVLRWPLDHVFSSEHFTLR--------------DMQRLPGF 306

Query: 292 LSDHCPISIDY 302
            SDH PI    
Sbjct: 307 GSDHFPILTTL 317


>gi|281340587|gb|EFB16171.1| hypothetical protein PANDA_021425 [Ailuropoda melanoleuca]
          Length = 348

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 65/292 (22%), Gaps = 73/292 (25%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + ++S N+N L+                     +  + K  D  I  LQE       A  
Sbjct: 3   LSIISINLNGLNSP--------------IKRHRVADWIKRHDPSICCLQETHFEPKDAFR 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                W   +        +             +                           
Sbjct: 49  LRVRGWSTIFHANGPQKKAGVAILISDRLDFKLE-------------------------- 82

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
               +  +  G  I +     +    + ++      +    SQ    +K  I +      
Sbjct: 83  ---AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKN----- 134

Query: 204 PFVIAGDFNRKINYLGNNDD------------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251
             VI GD N  ++ +                     +D  D               +   
Sbjct: 135 -TVIVGDLNTPLSEIDRTPWQKLSKESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAH 193

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                ID+ +  +       +      ++            SDH  + ++ +
Sbjct: 194 GTFSRIDHALGHKTGLSQYQKIEIIPCIF------------SDHNALKLELN 233


>gi|307201320|gb|EFN81167.1| Putative neutral sphingomyelinase [Harpegnathos saltator]
          Length = 269

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 34/142 (23%), Gaps = 12/142 (8%)

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
                     +    QA     ++          ++AGD N +   L            +
Sbjct: 16  EYNRKNDEYMAHRVLQAFDTAQFVRMTSGGADAVILAGDLNTEPQDLAYRIICGVAGLTD 75

Query: 232 DSLIRFPKEKDSRCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYN-E 282
                      + C  N                IDY +        +I+   +       
Sbjct: 76  ACPNSASYIGTNECANNSYTASKLVRTRPEGKRIDYILY---LDSDVIKAEITNYKLPLP 132

Query: 283 DDIKSRGKRLSDHCPISIDYDF 304
           + +  +    SDH  ++    F
Sbjct: 133 NRVPYKNFSYSDHEAVTATLKF 154


>gi|56756601|gb|AAW26473.1| SJCHGC04525 protein [Schistosoma japonicum]
          Length = 162

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 50/166 (30%), Gaps = 19/166 (11%)

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
               R  + + +     ++ +  + +                   + Q+A  L +++ Q 
Sbjct: 9   NLFERPPMAVQIFTKFSEVKMFGLIVVHLDPDS------------VFQEANDLYNFVNQV 56

Query: 199 KE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256
            +  +    +I GD N    YL         +  +        +K        +      
Sbjct: 57  MKIWNTQDLIILGDMNADCGYLSRKKMEQLHLRKDTKFTWIIPDKYDTTLGKGDCAYD-R 115

Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISI 300
           I   +  +   + +   S     +  +   +    K++SDH P+ +
Sbjct: 116 I--IIHGKQLKQAIKPGSAKAYQFPIELKINNQLAKQVSDHYPVEM 159


>gi|297708628|ref|XP_002831061.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A-like isoform 1 [Pongo abelii]
          Length = 1007

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 79/317 (24%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      +D   +           + LQE+ S     + 
Sbjct: 426 ITVVTWNVGTAMPPDDVTSLLHLGGGDDNDGADMIA---------IGLQEVNSMLNKRLK 476

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S+  +   I +   +  ++  L+             
Sbjct: 477 DALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 536

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +    Q 
Sbjct: 537 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAQG 592

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 593 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWPILKGFQEGP 652

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              ++S    +      
Sbjct: 653 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPSGGPSPSGRKSHRLQVTQHSYR 712

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 713 SHMEYTVSDHKPVAAQF 729


>gi|294817069|ref|ZP_06775711.1| Endonuclease/exonuclease/phosphatase family protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294321884|gb|EFG04019.1| Endonuclease/exonuclease/phosphatase family protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/342 (9%), Positives = 72/342 (21%), Gaps = 86/342 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++++ +NI                 R       +      ++ D+V L E         
Sbjct: 52  KLKVMQFNIWLGGS------------RVPGGRAGIADTIAAVEPDVVMLSESNPERVAHL 99

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +                       +N      AV  +   +   S+P             
Sbjct: 100 LADLAE------------RGLTYFDNKNPVDPAVISRYPIIEHASFPYWSKAVVSVDGTE 147

Query: 143 RRAVELLVEI------------NGKKIWVLDIHLKSFCFLDSLENT-----YSPSCSLLS 185
             A    +E              G    +                         + S  +
Sbjct: 148 VAAYSGHLEYRYYVNYLPRGYGGGTPSPLETSEYGWGEIPTGPITDTGLITRLNAASGRT 207

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPN 231
           +  + +     +++      ++AGDFN   +   N+                  K I+  
Sbjct: 208 KVTRTVLADAAEERAKGRLTLLAGDFNEPSHRDWNHRTRNLFDHNGTVVTWSTTKAIEDA 267

Query: 232 DSLIRFPKEKDSR------CNANKNLR-------------NKIPIDYFVMDQNAYKFLIQ 272
                +                + N                +  ID+     +    L+ 
Sbjct: 268 GFRDSYRVIHPDPVRRPGFTWPSDNPGADVSQLTWAPKADERDRIDFVFYHPDRRIHLLD 327

Query: 273 ESF------------SEILYNEDDIKSRGKRLSDHCPISIDY 302
                           E    +   +      +DH  +   +
Sbjct: 328 SVIVGPSSTIVRNQRVEESGRDRFWEPTWTWPTDHKAVLSTF 369


>gi|167515694|ref|XP_001742188.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778812|gb|EDQ92426.1| predicted protein [Monosiga brevicollis MX1]
          Length = 691

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/294 (10%), Positives = 67/294 (22%), Gaps = 57/294 (19%)

Query: 19  SVAQKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76
           +  + + +   ++N+N     +       S      D   L          +   QE+  
Sbjct: 105 TQTEPLSVAIGTYNVNGRRPVDEHGPVDLSPWVAQDDPADLY---------VFGFQELDL 155

Query: 77  YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136
                                                +    K      ++      +  
Sbjct: 156 SKEA--------------------------------FVFSDTKREEEWSEALAKALPRSE 183

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
               GN+  V + + I    I  +  HL +    D      + +          L   I 
Sbjct: 184 RYVRGNKGGVAISLTIKDTDICFVATHLAA---HDDAVARRNQAQHDYLFWLGDLNYRID 240

Query: 197 QKKESLVPFVIAGDF-----NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN- 250
               S+  +V   +      N ++         +              + D   +     
Sbjct: 241 APYASVRQWVEQQNMEELIKNDQLKAQQTAGLAFVRFKEPPIEFMPTYKFDPGTDTWDTS 300

Query: 251 --LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              R     D  +          Q S    + N +       R+SDH P+   +
Sbjct: 301 EKQRTPSYTDRILY---YEPDEGQRSSVNKVANIEYTSVPELRVSDHKPVRARF 351


>gi|154489087|ref|ZP_02029936.1| hypothetical protein BIFADO_02398 [Bifidobacterium adolescentis
           L2-32]
 gi|154083224|gb|EDN82269.1| hypothetical protein BIFADO_02398 [Bifidobacterium adolescentis
           L2-32]
          Length = 382

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 76/288 (26%), Gaps = 65/288 (22%)

Query: 15  PCTASVAQKV-------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
              A+  + V       RL++ N+                 +  +D   +    ++   +
Sbjct: 143 AVAAASGETVNTDDGYARLMTCNVY----------------KGRADAREIVDLVRSEHVE 186

Query: 68  IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
           ++ LQE     A      +     +    ++ +       N + +A  +   +   +  S
Sbjct: 187 VLALQETTD--AFVDDLNRAGIASYLPYAQVSSSDGVY-GNGLWSASPLDDPSDDDVDSS 243

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
              +                  V  NG    V  + + +    +     +  S       
Sbjct: 244 ASFMPGG--------------TVSFNGGATQVRFVSVHTTSPTNDYWQQWKRS------- 282

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
              L +    + ++   +V  GDFN   ++    +                 +     N 
Sbjct: 283 ---LDELAKLRFDTSRRYVFMGDFNATYDHTPFRNILGNRFSDASRQAGEGLKFSWPANV 339

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
           +        ID+ V+D       ++    +               SDH
Sbjct: 340 DYVPSFAG-IDHVVLDSGMQAGQVRTVKVD--------------GSDH 372


>gi|297708630|ref|XP_002831062.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A-like isoform 2 [Pongo abelii]
          Length = 940

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 79/317 (24%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      +D   +           + LQE+ S     + 
Sbjct: 359 ITVVTWNVGTAMPPDDVTSLLHLGGGDDNDGADMIA---------IGLQEVNSMLNKRLK 409

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S+  +   I +   +  ++  L+             
Sbjct: 410 DALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 469

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +    Q 
Sbjct: 470 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAQG 525

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 526 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWPILKGFQEGP 585

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              ++S    +      
Sbjct: 586 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPSGGPSPSGRKSHRLQVTQHSYR 645

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 646 SHMEYTVSDHKPVAAQF 662


>gi|148700525|gb|EDL32472.1| Traf and Tnf receptor associated protein, isoform CRA_b [Mus
           musculus]
          Length = 157

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 46/169 (27%), Gaps = 21/169 (12%)

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
             R  + + V + G +  ++  HL+S               +   +Q + +   + +   
Sbjct: 1   MMRNLLCVNVSLGGNEFCLMTSHLEST----------REHSAERIRQLKTVLGKMQE-AP 49

Query: 201 SLVPFVIAGDFNRKINY-----LGNNDDFWKTIDPNDSLIR-FPKEKDSRCNANKNLRNK 254
                + AGD N +           ++ F             +  +  +  N       K
Sbjct: 50  DSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYK 109

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              D           + Q     +     +    G+  SDH  +    +
Sbjct: 110 HRFDRIFFRAEEGHLIPQS----LDLVGLEKLDCGRFPSDHWGLLCTLN 154


>gi|262404574|ref|ZP_06081129.1| hypothetical protein VOA_002570 [Vibrio sp. RC586]
 gi|262349606|gb|EEY98744.1| hypothetical protein VOA_002570 [Vibrio sp. RC586]
          Length = 281

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 80/282 (28%), Gaps = 64/282 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ L+ WNI           +K +     SD T +    +     ++ LQE        
Sbjct: 59  GELNLLVWNI-----------YKQNRPNWQSDLTQISGSQQ-----LLLLQEANMNEPFK 102

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +  W            ++          +    K +  +  +Y  L          
Sbjct: 103 QWINQLGWD--------GTQARAFEAFGEAAGVINLAKVMPTIACAYTQLEP----WLRL 150

Query: 142 NRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            + A+     ++ + ++ V+++H  +F +                +Q   L + +     
Sbjct: 151 PKSAIYARYRLSNQQELAVVNLHAVNFTYGT----------QEYQEQLTALLEELQSFAG 200

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++AGDFN               +  + S+I          +      N + +D+ 
Sbjct: 201 ---PVIVAGDFNSWSTER------MALLSNSLSVIGLQPVTFEP-DNRTTFINGLALDHV 250

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  K                        SDH P+ + +
Sbjct: 251 FYRGLKLKKAEA---------------PQSDASDHNPLLVHF 277


>gi|198244210|ref|YP_002214214.1| hypothetical protein SeD_A0281 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|226708933|sp|B5FJ53|YAFD_SALDC RecName: Full=UPF0294 protein yafD
 gi|197938726|gb|ACH76059.1| protein YafD [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
          Length = 266

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 25  FASIGQALPAGEPLSSEERIRILVWNIF--------------KQQRAEWLSVLKNYGK-- 68

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 69  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V+++H  +F     + +     
Sbjct: 114 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYS----- 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 169 --------KQLLPIGDQIAHHSGPVIMAGDFNAW-SRPRMNALYRFAREMSLRQVRFTDD 219

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N ++      R SDH P+ +
Sbjct: 220 QRRRAFGRP-------LDFVFYRG---------------LNVNEASVLVTRASDHNPLLV 257

Query: 301 DYD 303
           ++ 
Sbjct: 258 EFS 260


>gi|221091679|ref|XP_002170010.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata]
          Length = 578

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 67/278 (24%), Gaps = 47/278 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +V+ N+N L++                    + +Y K    D + LQE        ++
Sbjct: 3   LNIVTLNVNGLNDD--------------VKRYNILKYLKLKQYDFICLQETHCSKEKEQL 48

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                       +     S  +        +++  K               D       R
Sbjct: 49  LQTE------WKKLTGGSSIWNCKTSRECGVSILTKTE---------TPFNDVPFEKDGR 93

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             +   +      I +  I+  +               +        L D+     E+ +
Sbjct: 94  -VIATNILYKNLTIRLFIIYGPNDPQRKEYFFASLDKHTKTCDLLILLGDF--NMVENPI 150

Query: 204 PFVIAGD-FNRKINYLGNN-DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261
                GD FNR  +    N   F       D   +    +        +   +  ID   
Sbjct: 151 IDRDGGDLFNRNNSLGKVNLQSFCNKYVLCDLYRKVKPFEYGFTFEKSDKLYRSRIDRIY 210

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                               E + K     LSDH  + 
Sbjct: 211 T-------------QIQPTIEYNCKIADTMLSDHRAVI 235


>gi|147803018|emb|CAN63923.1| hypothetical protein VITISV_004023 [Vitis vinifera]
          Length = 1081

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 35/107 (32%), Gaps = 19/107 (17%)

Query: 204 PFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
           P+ + GDFN  +     N           F + +D    +    +          N  +K
Sbjct: 539 PWCLGGDFNITLAQGERNRQGRISSAMRRFAEVVDDLGLVDLQLQGGAFTWTGGLNNMSK 598

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +D F++                 ++    +   + +SDH P+ ++
Sbjct: 599 ARLDRFLVSP----------CWLDQFSRVSQRRLPRPISDHFPVLLE 635


>gi|118150942|ref|NP_001071387.1| bucentaur-2 [Bos taurus]
 gi|117414086|dbj|BAF36506.1| p97Bucentaur-2 [Bos taurus]
 gi|151556961|gb|AAI49203.1| Bucentaur-2 [Bos taurus]
 gi|296478240|gb|DAA20355.1| bucentaur-2 [Bos taurus]
          Length = 634

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/296 (9%), Positives = 76/296 (25%), Gaps = 76/296 (25%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+ +++                    +++Q  + ++ DI+ + E+           
Sbjct: 247 IGTWNVRSMNPG---------------KLDVVKQEMERINIDILGISELKWTGMGE--LN 289

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
            +   I+Y  ++ +  +      +     AV                         N R 
Sbjct: 290 SDDHYIYYCGQQSLRRNGVAIIVNKRVRNAV-------------------IGCNLKNDRM 330

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           + +  +     + V+ ++  +    +     +      L            +    +   
Sbjct: 331 ISVRFQGKPFNLTVIQVYAPTPYAPEPEVYRFYEDLQHLL-----------EITPKIDVL 379

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPN-------------------DSLIRFPKEKDSRCN 246
            I GD+N K+          K                         + +    ++     
Sbjct: 380 FIIGDWNAKVGSQEIPRITGKFGLGVQNEAGRRLIEFCYQNRLVIANTLFQQHKRRLYTW 439

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
            + + R +  IDY +  Q     +               +      SDH  +   +
Sbjct: 440 TSPDGRYRDQIDYIICRQRWRSSVQSA----------KTRPGADCGSDHKLLIAKF 485


>gi|332859626|ref|XP_515083.3| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase A
           [Pan troglodytes]
          Length = 638

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 80/326 (24%), Gaps = 51/326 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                   ++ +V+WN+ T    + V+   +      SD   +           + LQE+
Sbjct: 48  AALGPSEPRITVVTWNVGTAMPPDDVTSLLHLGGGDDSDGADMIA---------IGLQEV 98

Query: 75  GS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129
            S     +      + W   +       +    S+  +   I +   +  ++  L+    
Sbjct: 99  NSMLNKRLKDALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQT 158

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      GN+  V + +   G  +  L+ HL +             +   +    Q
Sbjct: 159 DCTRTGLGGYWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQ 214

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND--------------------------D 223
             +    Q           GD N +I     +                            
Sbjct: 215 QFQGPGAQGILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNIAKNTWP 274

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFS 276
             K             + D   N        R     D  +              ++S  
Sbjct: 275 ILKGFQEGPLNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPGGGPSPSGRKSHR 334

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
             +            +SDH P++  +
Sbjct: 335 LQVTQHSYRSHMEYTVSDHKPVAAQF 360


>gi|170719367|ref|YP_001747055.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619]
 gi|169757370|gb|ACA70686.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619]
          Length = 259

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/274 (10%), Positives = 77/274 (28%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDAEVPAQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       +       D + R          ++ +  K+ +  + L S    D   
Sbjct: 69  ALYSRMQPKAVITGLGFETADRYGRY---------LQADFDKVSIASLLLPSGMNGDD-- 117

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG---------------DFNRKINYLG 219
                  +   +       ++ +++     ++  G               D  +   +L 
Sbjct: 118 -----DLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLP 172

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFL 270
               +   I  +   +   +E     +      +             DY ++     +F+
Sbjct: 173 PERAWMDAITGDMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RNA-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|212539902|ref|XP_002150106.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
 gi|210067405|gb|EEA21497.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
          Length = 1318

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/297 (8%), Positives = 86/297 (28%), Gaps = 57/297 (19%)

Query: 13  LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72
           ++ C   + + +R++  N+            +++++++  +   +R Y       ++ + 
Sbjct: 173 ILKCVPLMHKSLRVLQLNV----------GKRDTIQQSLMNDNKIRDY------GVIAIS 216

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           E  +      +        +++    I   + +    I + + +R        +  P+  
Sbjct: 217 EPYTRMIGNTMITSPMGHSYWTKM--IPTERYEGRWPIRSMLWIRSDI---EAEQIPVAS 271

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                           ++++  + + V+ ++++              +    ++    L 
Sbjct: 272 PD----------LTAAILQLPDRAVLVVSVYVE---------GNNKEALISTTRLLHDLV 312

Query: 193 DWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246
             I  +       +I GDFNR                  + +    +             
Sbjct: 313 VDIRGRDGIRTDVLIVGDFNRHDQLWGGDQISPARQGEAEVLVDYITEHSLQSLLPRGTK 372

Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +   +  ID  +      + +++                    SDH  I  ++D
Sbjct: 373 TWHSGDLETTIDLVLASTELAEEMVKCGIH-----------YTNHGSDHQAIETEFD 418


>gi|224011357|ref|XP_002295453.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583484|gb|ACI64170.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 712

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 67/226 (29%), Gaps = 31/226 (13%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVK---------RTTSDYTLLRQYAKNLDADIVFLQE 73
              ++SWN+   +  EG    +             +       + Q   + ++DI+ LQE
Sbjct: 160 PFSILSWNVLAQALYEGHYESRKKQPSLSESPHPHQWPKRLERMIQILSHSNSDIICLQE 219

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLG 132
               +    + P  +   +    +     +R ++    T     R        +      
Sbjct: 220 CELQSFQDDLAPALSKLGYDGIAQEDERDERPTSLKYVTKHRDPRNHIAATFWKRSKFDP 279

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIW-------VLDIHLKSFCFLDSLENTYSPSCSLLS 185
              S+ R  +     L ++ + K +        V+       C L+     +S     L 
Sbjct: 280 VGKSYIRTRS-LTNVLRLKADSKNVDSKSRGKKVMPSVAIVNCHLEGHPRRFSERTHQLQ 338

Query: 186 QQAQWLKDWITQKKESLVPF-------------VIAGDFNRKINYL 218
                L   + ++ E                  ++AGDFN ++   
Sbjct: 339 HALGDLAKRVKKENEESQSISRDASHIGKLNALLLAGDFNCELQSS 384


>gi|50285291|ref|XP_445074.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524377|emb|CAG57974.1| unnamed protein product [Candida glabrata]
          Length = 471

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 60/209 (28%), Gaps = 17/209 (8%)

Query: 23  KVRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN--- 78
            + ++++N    +        +     +      +L    K+ +ADI  LQE+       
Sbjct: 79  PLSIMTYNCLAQTLIRREMFPESGPALKWFVRSKVLLHEIKHYNADICCLQEIDDVQYDL 138

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
             ++  PK  +   Y  +   +H    +  +    +          +++   +  +   +
Sbjct: 139 FWSEELPKFGYKTIYFHQDSKSHGVMIAWKEELFQLESHMNIEF-DKEAPAGIQPRTRTN 197

Query: 139 RAGNRRAVELL--VEINGKKIW-----VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191
             G   A+           +I      V+      F       +       +  +  +  
Sbjct: 198 NVGLLVALAFTDAFRARNNRIRTSRSGVIIGTFHLFWHPFGTYDRTRQCLVIKKKILE-- 255

Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGN 220
                   +     +  GDFN + N +  
Sbjct: 256 ---FAGTVKGDYCKMFTGDFNSQPNSVPY 281


>gi|225685280|gb|EEH23564.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides
           brasiliensis Pb03]
          Length = 510

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/202 (8%), Positives = 37/202 (18%), Gaps = 60/202 (29%)

Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVP 204
              ++  G+ + +      +F  L                      +   +         
Sbjct: 23  AATLDSEGRCVIL---EFPAFVLLGVYCPANRDEMRDGFRKAFVNAVDARVRNLVGMGKR 79

Query: 205 FVIAGDFNRKIN----------------------YLGNNDDFWKTIDPND---------- 232
            ++ GD N   +                             F + +              
Sbjct: 80  VILTGDLNISGSEIDSARALEEIRKGTTTNSEFVSAPVRRIFNQLVSGGKVIGDRDQGRE 139

Query: 233 ---SLIRFPKEKDSRCNANKNL---------RNKIPIDYFVMDQNAYKFLIQESFSEILY 280
               +    +    R                     IDY +       +    +      
Sbjct: 140 TPVLVDLCREYHPDRRGMYTCWEQRVNARPGNYGSRIDYVLCSLIMRDWFCASNIQ---- 195

Query: 281 NEDDIKSRGKRLSDHCPISIDY 302
                   G   SDHCP+  D 
Sbjct: 196 -------EGLMGSDHCPVYADI 210


>gi|262396695|ref|YP_003288548.1| hypothetical protein VEA_001400 [Vibrio sp. Ex25]
 gi|262340289|gb|ACY54083.1| hypothetical protein VEA_001400 [Vibrio sp. Ex25]
          Length = 304

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 67/305 (21%)

Query: 5   YVLALVFFLVPCTASV-----AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           +V  L   L+  +        +  + ++ +N+   +                 D      
Sbjct: 55  FVAILFVSLLVPSQRSHVVSCSHSLSVIQFNLFYENS----------------DINQFIN 98

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           Y     AD+V +QE+            + +  +Y  +R   +            + +  +
Sbjct: 99  YLLRHPADLVVMQELTPRVGSLLHMLDDVYPHYYGGQRDAGYPSN---------LMILSR 149

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +       Y     ++            + +      I +   H  S             
Sbjct: 150 HPITEVSVYRAPNGQE--------VIRAVWLPKGQAPITLFAAHPPSPRT---------- 191

Query: 180 SCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             S L  Q   L   I            ++ GDFN            + T+ P+      
Sbjct: 192 --SELWHQRNALVRTIEMLTALYPEPEVLVVGDFNLSSVSPR-----FATLFPSFQTAPV 244

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                +    N      I ID+  +     + +I               S   + SDH  
Sbjct: 245 TSWPTNIKGINVPEPMMIGIDHLWLKSEQGQRIICS----------RESSALPQGSDHRM 294

Query: 298 ISIDY 302
           ++   
Sbjct: 295 VTTQI 299


>gi|332097404|gb|EGJ02384.1| endonuclease/exonuclease/phosphatase family protein [Shigella
           boydii 3594-74]
          Length = 93

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 27/103 (26%), Gaps = 16/103 (15%)

Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
               P ++AGDFN       +       +D       F +               + +D 
Sbjct: 5   PDGEPVLVAGDFNDWRQKANHPLKVQAGLDE-----IFTRAHGRPARTFPVQFPLLRLDR 59

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +   +                       + LSDH P+S + 
Sbjct: 60  IYVKNASAS-----------APTALPLRTWRHLSDHAPLSAEI 91


>gi|291444992|ref|ZP_06584382.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291347939|gb|EFE74843.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 301

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 55/249 (22%), Gaps = 50/249 (20%)

Query: 52  SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            D     +      AD+V L+E+                     E+ +            
Sbjct: 98  RDPAGTARALIGSGADLVALEELVDPQ-------------VAVYEKSLAADYPHHVVRGT 144

Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171
             +  +                ++ +SR      V  +V      +     HL S     
Sbjct: 145 VGLWSKHPLSGEQVVDIKPPSIEEGWSR-----GVRAVVHSPYGDVAAYVAHLPSVRVGV 199

Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231
               +     S     A  L   I    ES+   V+ GD N  +   G      +     
Sbjct: 200 GGLASQRRDES-----ASLLGRAIAG--ESVEAVVLLGDLNGVVEDRGLRPLTSQLSFAE 252

Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
                          +       + ID  +        +     +               
Sbjct: 253 TGF----------AFSFPAAFPVVRIDQVMARSATVGHIRTLPAT--------------- 287

Query: 292 LSDHCPISI 300
            SDH P+  
Sbjct: 288 GSDHLPVVA 296


>gi|3073779|dbj|BAA25763.1| reverse transcriptase [Chlorella vulgaris]
          Length = 1309

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 74/286 (25%), Gaps = 33/286 (11%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S +  +RL+S N+N L              R       L    +    DI+ LQE   ++
Sbjct: 4   SRSPSLRLLSLNVNGL--------------RDRDKRRCLFNLLERDRWDIILLQET-HHS 48

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
           +  +                   +           +A       VL +      A     
Sbjct: 49  STEEGTAWAQEGPAGVRCNWSGPAFWCHFTSQSRGVA-------VLLRPTASTAAITVRH 101

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
            +   R + +     G+   V  ++  +         T     SL    A+ L       
Sbjct: 102 CSTTGRTLLVDFTYCGQPYTVASVYAPAAAADRQQYYTQELLPSL--PAARCLLVGGDFN 159

Query: 199 KESLVPFVIAGDFNRKINYLGNN-DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
             +    + AG   ++ +                D          +  +     ++   +
Sbjct: 160 CIAGQQDMAAGQPGQRTHGYWTGLRLVETEHQLYDVWRDLNPSSRAFTHVATTGQSAARL 219

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           D +++ +     +      E       +   G    DH  +S+   
Sbjct: 220 DRWLVSETLRARVS----REPRAIGQVLGYPG----DHLGVSLSLT 257


>gi|149413779|ref|XP_001517168.1| PREDICTED: similar to ocrl1, partial [Ornithorhynchus anatinus]
          Length = 864

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 72/302 (23%), Gaps = 45/302 (14%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYNAVAKV 83
           + +WN+N  S   G+  W N                     DI  +  QE+         
Sbjct: 206 VGTWNVNGQSPDSGLEPWLNCDPDP---------------PDIYCIGFQELDLSTEAFFY 250

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTA-------IAVRKKNVRVLQQSYPLLGAKDS 136
           F       +        H +                 +  RK  +  ++           
Sbjct: 251 FESMKEQEWLMAVEKGLHPRAKYKKVQLVRLVGMMLLVFARKDQLSHIRDIAAETVGTGI 310

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             + GN+  V +    +     +++ HL +        N                +    
Sbjct: 311 MGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFLVPDQSLPQ 370

Query: 197 QKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTIDPNDSL------IRFPKEKD 242
                    +  GD N ++            + +D  K +  +           F    +
Sbjct: 371 MNIMKHDVVIWLGDLNYRLCIPDANEVKSLISRNDIQKLLTLDQLNIQRSHKKAFADFIE 430

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-----RLSDHCP 297
                    +     D    D +    +       +    +  +   +     + SDH P
Sbjct: 431 GDIKFIPTYKFDSKTDQ--WDSSGKCRVPAWCDRILWRGTNVQQQYYRSHMELKTSDHKP 488

Query: 298 IS 299
           +S
Sbjct: 489 VS 490


>gi|50307403|ref|XP_453680.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642814|emb|CAH00776.1| KLLA0D13860p [Kluyveromyces lactis]
          Length = 941

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 84/287 (29%), Gaps = 60/287 (20%)

Query: 55  TLLRQYAKNLD--AD--IVFLQEMGSYNAVAKVFPKNTWCIFY--------STERLINHS 102
             L  + K  +   D  ++ L+E+   +    +        F+        ++     + 
Sbjct: 538 EKLEGWLKPENESPDLYVIGLEEIVELSPGHMLATDPYIKTFWEKKLLSEINSYNDKKYH 597

Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF--SRAGNRRAVELLVEINGKKIWVL 160
              ++     A+ V        +  +     K +     + N+ A+ + + ++  K   +
Sbjct: 598 AVFNSQLGGLALLVFTDEENKSRIKHIEGDMKKTGFGGISSNKGAIAVHLWLSNTKFCFV 657

Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK------ 214
             HL +        +    S       A+ ++     + +     +  GDFN +      
Sbjct: 658 VSHLSAGLENVEQRHNDYKSI------AKHIRFSKGTRIKDHDGVIWMGDFNFRILLSND 711

Query: 215 ----------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------RNKIP 256
                      + L   D   + +   +S   F + + +     K            K+ 
Sbjct: 712 DVRQAIIDKNYHRLFEKDQLNQQMISGESFPFFDEMEITFPPTYKFNPGTDVYDTSEKMR 771

Query: 257 I----DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
           I    D  +      +  +  S  +I++            SDH P+ 
Sbjct: 772 IPAWTDRILSRGEILRQELYGSAEDIVF------------SDHRPVY 806


>gi|50726960|ref|NP_001002837.1| phosphatidylinositol 4,5-bisphosphate 5-phosphatase A [Homo
           sapiens]
 gi|119580343|gb|EAW59939.1| phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A, isoform
           CRA_d [Homo sapiens]
          Length = 638

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 80/326 (24%), Gaps = 51/326 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                   ++ +V+WN+ T    + V+   +      SD   +           + LQE+
Sbjct: 48  AALGPSEPRITVVTWNVGTAMPPDDVTSLLHLGGGDDSDGADMIA---------IGLQEV 98

Query: 75  GS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129
            S     +      + W   +       +    S+  +   I +   +  ++  L+    
Sbjct: 99  NSMLNKRLKDALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQT 158

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      GN+  V + +   G  +  L+ HL +             +   +    Q
Sbjct: 159 DCTRTGLGGYWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQ 214

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND--------------------------D 223
             +    Q           GD N +I     +                            
Sbjct: 215 QFQGPGAQGILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWP 274

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFS 276
             K             + D   N        R     D  +              ++S  
Sbjct: 275 ILKGFQEGPLNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPGGGPSPSGRKSHR 334

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
             +            +SDH P++  +
Sbjct: 335 LQVTQHSYRSHMEYTVSDHKPVAAQF 360


>gi|18378941|ref|NP_563646.1| endonuclease/exonuclease/phosphatase family protein /
           calcium-binding EF hand family protein [Arabidopsis
           thaliana]
 gi|148887024|sp|O81916|YC22_ARATH RecName: Full=Uncharacterized calcium-binding protein At1g02270
 gi|15450673|gb|AAK96608.1| At1g02270/T6A9_9 [Arabidopsis thaliana]
 gi|17380606|gb|AAL36066.1| At1g02270/T6A9_9 [Arabidopsis thaliana]
 gi|332189287|gb|AEE27408.1| uncharacterized calcium-binding protein [Arabidopsis thaliana]
          Length = 484

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 84/265 (31%), Gaps = 23/265 (8%)

Query: 28  SWNIN---TLSEQEGVSLWKNSVKR--TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           ++NI         +     + S  R    +    +     +  + ++ LQE+   N   +
Sbjct: 75  TFNILAPIYKRVDQKNHSTRESDFRTLWLARNQRILDLLLHQRSSVICLQEVWVGN--EE 132

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +       +  S   +   ++ +S  D     A+ K + +V+     L            
Sbjct: 133 LVNMYHHQLSSSGYTIYQLARTNSRGDGLLT-AIHKDHFKVVNYRELLFNDFGDRVAQLL 191

Query: 143 RRAVELLVEINGK-----KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                +   +NGK     ++ +++ HL                  +     ++L+ +  +
Sbjct: 192 HVKTVIPFPLNGKQDVQQEVIIVNTHLLFPHDSSLSIVRLHQVYKI----LEYLEAYQKE 247

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-KIP 256
            K + +P ++ GD+N           F ++     S     +  DS  +   + RN +  
Sbjct: 248 NKLNHMPIILCGDWNGSKRGHVYK--FLRSQGFISSYDDAHQYTDSDAHRWVSHRNHRGN 305

Query: 257 I---DYFVMDQNAYKFLIQESFSEI 278
           I   D+  +   +       +    
Sbjct: 306 ICGVDFIWLCNPSDSRKPLRTSWVE 330


>gi|331657785|ref|ZP_08358747.1| exodeoxyribonuclease III (Exonuclease III) (EXO III)
           (APendonuclease VI) [Escherichia coli TA206]
 gi|331056033|gb|EGI28042.1| exodeoxyribonuclease III (Exonuclease III) (EXO III)
           (APendonuclease VI) [Escherichia coli TA206]
          Length = 123

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 28/98 (28%), Gaps = 16/98 (16%)

Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQ 264
           K ++L    ++ + +     +  F        +       +           ID  +  Q
Sbjct: 31  KCSFLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQ 90

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
              +  ++          D      ++ SDH P+   +
Sbjct: 91  PLAECCVETGI-------DYEIRSMEKPSDHAPVWATF 121


>gi|295096917|emb|CBK86007.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 259

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 90/305 (29%), Gaps = 77/305 (25%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +K+R++ WNI                ++     ++L+ + K  
Sbjct: 18  FASLGQALPAGTPLSSDEKIRVLVWNIF--------------KQQRAEWLSVLKNFGK-- 61

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 62  DAHLVLLQEAQTTPELVRFATTN---------------YLAADQVPAFVLPQHPSGVMTL 106

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V++IH  +F     + +     
Sbjct: 107 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYS----- 161

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR--KINYLGNNDDFWKTIDPNDSLIRFP 238
                   + L     Q      P ++AGDFN   +           +            
Sbjct: 162 --------KQLLPIGDQIAHHSGPIIMAGDFNAWSRPRMNALYRFAREMSLREVRFNDDQ 213

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           ++K              P+D+                     +  D      R SDH P+
Sbjct: 214 RKKA----------FGRPLDFVFYRG---------------LSVHDASVLVTRASDHNPL 248

Query: 299 SIDYD 303
            +++ 
Sbjct: 249 LVEFS 253


>gi|212547169|ref|XP_002153737.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
 gi|210064393|gb|EEA18490.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
          Length = 1703

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 77/292 (26%), Gaps = 61/292 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R++  N+             +S+         +           + +QE  +     
Sbjct: 451 KTLRVIQLNVR------KQGAVHDSLMNDKEIQDAVA----------IAIQEPQARRIQG 494

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           ++         +   +++  + R+    I + + V K  V   Q          +  R  
Sbjct: 495 RLLTTPM--GHHRWTKMVPSAWREGRWAIRSMLWVNKD-VEAEQVPIESPDLTAAVIRLP 551

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
            R      V + G                       + +        +     + +   +
Sbjct: 552 ERLIFMASVYVEGG---------------------DAQALRDTCNHLREAITKVRRSTGT 590

Query: 202 LVPFVIAGDFNR----------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251
           +V   I GDFNR           +   G  D     ++         +   +     ++ 
Sbjct: 591 VVEITIVGDFNRHDQLWGGDDVSLERQGEADPIIDFMNEFALTSLLKRGTKTWQGRGQDG 650

Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +  ID  +  +N    +++ +               +  SDH  I    D
Sbjct: 651 DYESTIDLVLASENLTDSMVKCAIH-----------GTEHGSDHRAIETVLD 691


>gi|66809941|ref|XP_638694.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
 gi|60467249|gb|EAL65282.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
          Length = 1800

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 85/327 (25%), Gaps = 86/327 (26%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIV--FLQEMGSYNAVA 81
           + +WN                          L  +    +   DI+   LQE+ +  A A
Sbjct: 449 VGTWN------------------CNAKRTQNLANWILTNSFAPDIIVLGLQEIVNMKAGA 490

Query: 82  ------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI------AVRKKNVRV 123
                       K    + W         ++   R         +       V++++   
Sbjct: 491 IVKATAADKQNNKENAYHPWKHDIEQTLSLSSGGRYVKVMNKVLVGLMILVYVKEEHAPY 550

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           + +    +       + GN+  + +   +    I  ++ HL +    + +E        +
Sbjct: 551 ISEVSGAVVPCGMMGKIGNKGGLGVRFTLYKTGICFVNSHLAAGPSHEKMERRTQDYKKI 610

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKT 227
                +     +          +  GD N +I+   +                +D     
Sbjct: 611 QMMTFENHLSMLDH-----ECLIWFGDLNYRIDLPYSETKALIEQKNWQKLQAHDQLNNE 665

Query: 228 IDPNDSLIRFPKEKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESF 275
                + I F +E  +   + K              R     D  +            S 
Sbjct: 666 RKAGKAFIGFKEELTNFAPSYKYDIGVNQYDTSEKNRTPSWCDRIIYRGE--------SL 717

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            +I Y   ++       SDH PIS  +
Sbjct: 718 KQISYQRHELME-----SDHRPISAIF 739


>gi|302852561|ref|XP_002957800.1| hypothetical protein VOLCADRAFT_98932 [Volvox carteri f.
           nagariensis]
 gi|300256871|gb|EFJ41128.1| hypothetical protein VOLCADRAFT_98932 [Volvox carteri f.
           nagariensis]
          Length = 652

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/88 (10%), Positives = 26/88 (29%), Gaps = 5/88 (5%)

Query: 24  VRLVSWNINTLSEQEG-----VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
            R +SWNI      +           ++    +     +  + +    D++ LQE+  + 
Sbjct: 73  FRFMSWNILADELAQSHAAELYPQAHHTCLDWSRRLAAVVSHVETHRPDVLCLQEVDDWP 132

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDS 106
            + +      +   +            +
Sbjct: 133 RLRQALGAVGYDGVHLQRTGGRGDGCAT 160


>gi|296411919|ref|XP_002835676.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629464|emb|CAZ79833.1| unnamed protein product [Tuber melanosporum]
          Length = 1179

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/308 (10%), Positives = 77/308 (25%), Gaps = 45/308 (14%)

Query: 26  LVSWNINT----LSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYN 78
           + ++N+N     +++     L    ++ +     L+    Q    L       Q++ S +
Sbjct: 608 VGTFNLNGQTSGMNDDLSQWLCPPFLENSPLHPELVVVGFQEIVQLSP-----QQIMSTD 662

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTAIAVRKKNVRVLQQSYPLLGA--- 133
              +   +       ++       +             A+         +    +     
Sbjct: 663 PARRQLWEQAVLKALNSHARATGGEEYVLLRGGQLVGAALLIYVKASAIREVRNVEGSLK 722

Query: 134 -KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                  AGN+ AV + +E    ++  +  HL +        N            A  L+
Sbjct: 723 KTGMSGVAGNKGAVAIRMEYANTRLCFVTAHLAAGFSNYEERNRD------YRTIAHGLR 776

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---------------NDSLIRF 237
               +  +     +  GDFN +I            +                       +
Sbjct: 777 FQRGRTIDDHDTVIWLGDFNYRIGLPDEKVRKLVGLGDLQTLYDNDQLNLQMIAGLAFPY 836

Query: 238 PKEKDSRCNA-NKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             E     +   K        D     +      +  +         +    +   R SD
Sbjct: 837 FSEARLTFDPTYKYDIGTDRYD---TSEKARIPAWCDRVLRRGKNLRQLSYGAVPLRFSD 893

Query: 295 HCPISIDY 302
           H P+   +
Sbjct: 894 HRPVYATF 901


>gi|288937013|ref|YP_003441072.1| endonuclease/exonuclease/phosphatase [Klebsiella variicola At-22]
 gi|330005761|ref|ZP_08305373.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella sp.
           MS 92-3]
 gi|288891722|gb|ADC60040.1| Endonuclease/exonuclease/phosphatase [Klebsiella variicola At-22]
 gi|328536129|gb|EGF62517.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella sp.
           MS 92-3]
          Length = 268

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 83/289 (28%), Gaps = 71/289 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  +K+R++ WNI                K+  +++  + +     DA +V LQE  +  
Sbjct: 42  SSDEKIRVLVWNIF---------------KQQRAEWQSVLKNFGK-DAHLVLLQEAQTTP 85

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +    N                  ++      +      V  L  ++P+        
Sbjct: 86  ELVRFATSN---------------YLAADQVPALVLPQHPSGVMTLASAHPIYCCPLRER 130

Query: 139 RAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R     LV      + + + V++IH  +F     + +             + L   
Sbjct: 131 EPILRLPKSALVTVYPLPDARLLMVVNIHAVNFSLGVDVYS-------------KQLLPI 177

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             Q      P ++AGDFN         +  ++             +   R          
Sbjct: 178 GDQIAHHSGPVIMAGDFNAW--SRPRMNALYRFAREMSLREVRFSDDQRR------RAFG 229

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            P+D+                     +  D      R SDH P+ +++ 
Sbjct: 230 RPLDFVFYRG---------------LSVHDASVLVTRASDHNPLLVEFS 263


>gi|147777454|emb|CAN73833.1| hypothetical protein VITISV_034783 [Vitis vinifera]
          Length = 1168

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 40/130 (30%), Gaps = 22/130 (16%)

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------DDFWKTIDP 230
           S        + L       ++   P+ I GDFN  ++    +           F + +D 
Sbjct: 618 SKEEREWMWEELGAIRGIWED---PWCIGGDFNVTLSLRERSNQGRLTSAMRRFAQVVDE 674

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            + +    +      +  +N +    +D F++ Q       +     +            
Sbjct: 675 LELIDLPLQGGMLTWSGGRNNQAWARLDRFLVTQGWLDHFNEVVQCRLPRPT-------- 726

Query: 291 RLSDHCPISI 300
             SDH PI +
Sbjct: 727 --SDHFPIVL 734


>gi|28900341|ref|NP_799996.1| hypothetical protein VPA0486 [Vibrio parahaemolyticus RIMD 2210633]
 gi|28808652|dbj|BAC61829.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
          Length = 315

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 78/305 (25%), Gaps = 68/305 (22%)

Query: 6   VLALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
            +A++F  +      +        + ++ +N+   +                 D      
Sbjct: 66  FVAILFVSLLVPPQRSHVASCSHSLSVIQFNLFYENS----------------DINQFIN 109

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           Y     AD+V +QE+            + +  ++  +R + +            + +  +
Sbjct: 110 YLLRHPADLVVMQELTPRVGSLLHMLDDVYPHYHGGQRDVGYPSN---------LMILSR 160

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +       Y     ++            + +      I +   H  S             
Sbjct: 161 HPITEVSVYRAPNGQE--------VIRAVWLPKGQAPITLFAAHPPSPRT---------- 202

Query: 180 SCSLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             S L  Q   L   I            ++ GDFN            + T+ P+      
Sbjct: 203 --SELWHQRNALVRTIETLTALYPEPEVLVVGDFNLSSVSPR-----FSTLFPSFQTAPV 255

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                +    N      I ID+  +     + +I               S   + SDH  
Sbjct: 256 TSWPTNIKGINVPEPMMIGIDHLWLKSEQGQRIICS----------RESSALPQGSDHRM 305

Query: 298 ISIDY 302
           ++   
Sbjct: 306 VTTQI 310


>gi|330505628|ref|YP_004382497.1| exodeoxyribonuclease III Xth [Pseudomonas mendocina NK-01]
 gi|328919914|gb|AEB60745.1| exodeoxyribonuclease III Xth [Pseudomonas mendocina NK-01]
          Length = 254

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 74/272 (27%), Gaps = 59/272 (21%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  + +  +AD++ LQ     +  A  F  +          L        +      +A+
Sbjct: 14  LLSWLQAQNADVICLQ-----DTRASAFEMDDQAFQLDGYFLYACDGEVPSQG---GVAL 65

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +       S       D + R          ++ +  K+ +  + L S    D     
Sbjct: 66  YSRLQPKAVISGLGFEMADRYGRY---------LQADFDKVSIATLLLPSGRDGD----- 111

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG---------------DFNRKINYLGNN 221
              S +   +       ++ +++     ++  G               D  +   +L   
Sbjct: 112 --ESLNQKFKFMDDFTHYLDKQRRKRREYIYCGSLHVAHQKMDVKNWRDCQQSPGFLAPE 169

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQ 272
             +   +  N   +   +E     +      +             DY ++     + +  
Sbjct: 170 RAWMDEVVGNMGYVDALREVSREGDQFSWWPDNEQAEMLNLGYRFDYQLLTPGMRRSVRS 229

Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                          R  R S H P+ +DYD+
Sbjct: 230 A-----------RLPRQPRFSQHAPLIVDYDW 250


>gi|29290095|gb|AAO67565.1| Pol protein [Drosophila americana]
          Length = 1517

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 74/284 (26%), Gaps = 44/284 (15%)

Query: 30  NINTLSEQEGVSLWKNSVKRTTS----DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           N    +                +        +  +  + + DI+ + E+    + +    
Sbjct: 48  NTRNHASSRQCGHPFKMAYWNAAGVSNKCREMEAFMCHHNVDIMMVIELRQRASQS---A 104

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV-RVLQQSYPLLGAKDSFSRAGNRR 144
            N+    ++     +     +      A   R   V  +++     +  +     A    
Sbjct: 105 SNSVRGPFANNVSPSIDGYHTYVATRKAPNQRFGGVAILIRHGIKHIALEPIMQDACQCA 164

Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
            V + +    + I V  I+        S                  L   I         
Sbjct: 165 PVAITLSTQ-ETILVAPIYCPPQYKWTSENFGK-------------LLSHIDSLSPQG-- 208

Query: 205 FVIAGDFNRKINYLG------NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           F+I GD+N K  + G         +  +TI  N           +             ID
Sbjct: 209 FIICGDWNAKSTWWGNMRHCQRGRELLRTIHSNKKYNILATG-GTTHYPYARGNQPSAID 267

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           + +      + L   S +++              SDH PI ID 
Sbjct: 268 FAIYGGIGDRRLRTYSINDLN-------------SDHLPILIDL 298


>gi|323332228|gb|EGA73638.1| Ngl3p [Saccharomyces cerevisiae AWRI796]
          Length = 225

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/211 (11%), Positives = 61/211 (28%), Gaps = 9/211 (4%)

Query: 27  VSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVAK 82
           +++N    TL  ++          +      +L    K    D+V LQE+     N   +
Sbjct: 1   MTYNTLAQTLIRRD-FFPESGPALKWHKRSKVLVHELKKYRPDVVSLQEVDYNELNFWQE 59

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
            F K  + + +       H    + N+    +            +  ++ A+        
Sbjct: 60  NFHKLGFDMIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVISARTRTKNIAL 119

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             ++      +     ++  +   F     +      S  +     Q +++     K + 
Sbjct: 120 IISLYFKGITDSSSRGIIVANTHLFWHPFGVFERLRQSYLV----LQKIQEIKACSKYNG 175

Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233
              ++ GDFN +           + +     
Sbjct: 176 WHSLLMGDFNTEPEEPPYLAITKRPLILKGP 206


>gi|307188889|gb|EFN73438.1| Inositol polyphosphate 5-phosphatase OCRL-1 [Camponotus floridanus]
          Length = 817

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 87/325 (26%), Gaps = 69/325 (21%)

Query: 19  SVAQKVRLVS--WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK--NLDADI--VFLQ 72
           + ++  R+++  WN+N                        L Q+     L  DI  +  Q
Sbjct: 157 TYSKTFRILTCTWNVNGQPPNG----------------IKLDQWLSTDELPPDIYAIGFQ 200

Query: 73  EMGSYN---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-----KKNVRVL 124
           E+          +   +  W                        I +           + 
Sbjct: 201 ELDLSKEAFLFHETPREEEWRQVIVDSLHPGGVYTQVALVRLVGIMLLVYALETHMPYIE 260

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
             S           + GN+  V +   I+   +  ++ HL + C      N         
Sbjct: 261 NVST-DTVGTGIMGKLGNKGGVAVSCCIHNTSVCFVNAHLAAHCEEFERRNQDYADICAR 319

Query: 185 --------------SQQAQWLKDWITQKKESLVPF----VIAGDFNRKINYLGNNDD--- 223
                           Q  WL D   +  +         +  G++N  +           
Sbjct: 320 LSFTKYVPPKNFKDHDQIYWLGDLNYRITDMDAAVAKQYISEGNYNSVLALDQLGQQRKA 379

Query: 224 --FWKTIDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278
              ++     +   +   + D   +   +    R     D  +   +  K +  +S+SE+
Sbjct: 380 GRVFQGFQEAEINFKPTYKYDPGTDNWDSSEKCRAPAWCDRVLWKGDMIKSISYKSYSEL 439

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
                       ++SDH P+S +++
Sbjct: 440 ------------KISDHKPVSANFE 452


>gi|297260879|ref|XP_002798372.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase A
           isoform 2 [Macaca mulatta]
          Length = 638

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 79/326 (24%), Gaps = 51/326 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                   ++ +V+WN+ T    + V+   +      S    +           + LQE+
Sbjct: 48  AALGPSEPRITVVTWNVGTAMPPDDVTSLLHLGGGDDSGGADMIA---------IGLQEV 98

Query: 75  GS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129
            S     +      + W   +       +    S+  +   I +   +  ++  L+    
Sbjct: 99  NSMLNKRLKDALFTDQWSELFMDALAPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQT 158

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      GN+  V + +   G  +  L+ HL +             +   +    Q
Sbjct: 159 DCTRTGLGGYWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQ 214

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND--------------------------D 223
             +    Q           GD N +I     +                            
Sbjct: 215 QFQGPGAQGILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWP 274

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFS 276
             K             + D   N        R     D  +              ++S  
Sbjct: 275 ILKGFQEGPLNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPGGGPSPSGRKSHR 334

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
             +            +SDH P++  +
Sbjct: 335 LQVTQHSYRSHMEYTVSDHKPVAAQF 360


>gi|152995369|ref|YP_001340204.1| hypothetical protein Mmwyl1_1340 [Marinomonas sp. MWYL1]
 gi|150836293|gb|ABR70269.1| Endonuclease/exonuclease/phosphatase [Marinomonas sp. MWYL1]
          Length = 258

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 87/306 (28%), Gaps = 57/306 (18%)

Query: 1   MIRK---YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57
           M++     V +L         ++   ++++ WN+           +K   K   SD+  L
Sbjct: 1   MMKSRYSTVESLKIMGSASKQAIGPNIKVLLWNV-----------FKCKRKGWQSDFASL 49

Query: 58  RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAV 116
                  + D++ LQE    +    +F  ++      ++      S  ++     +++  
Sbjct: 50  IN-----NKDLILLQEAILNSPFDGMFNHSSQHQWIMASSFKNVKSNIETGVKTGSSVVA 104

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
            K        S P+   K          A         + + V++ H+ +F         
Sbjct: 105 NKHFFSASAHSEPITKTKKMVLATEYPLARIAE-SPIEQSLLVINTHMINFVS------- 156

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236
                    +    L       +    P ++AGDFN         +          ++  
Sbjct: 157 -------FEKFRAHLDQAFQALEHHSGPILLAGDFNTW-------NRKRMQYFDELAISC 202

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
             KE D           +  +D+                   L   D         SDH 
Sbjct: 203 SLKEVDITRQPRLGHLFR-HLDHIFCRG--------------LGVVDVHVHTDIHSSDHF 247

Query: 297 PISIDY 302
           PIS+  
Sbjct: 248 PISLSL 253


>gi|58267852|ref|XP_571082.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
 gi|57227316|gb|AAW43775.1| conserved hypothetical protein [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1256

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/338 (15%), Positives = 99/338 (29%), Gaps = 72/338 (21%)

Query: 26   LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIV--FLQEM-----GSY 77
            + +WNI         S     +  + ++   L    +++D  DI+    QE+       Y
Sbjct: 890  ICTWNI--------DSAKPTDLNGSVANAHFLEDVLRSVDSPDIIVFGFQEVIPLTDKKY 941

Query: 78   NAVAKVFPKNTWCIFYSTERLINHSKRD------------------------SNNDIHTA 113
             A   +F   +     + +R+ +  +                          S   + T 
Sbjct: 942  TAKTLLFGNKSKDGGAAADRVSHAYRHWLEKLQSAVKMASPSNCPYVKIHSESLVGLFTC 1001

Query: 114  IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            I V++     L+        +      GN+ A+   + ++   I  +++HL +     + 
Sbjct: 1002 IFVKQSEKNFLRDLDITTVKRGIGGIYGNKGAIVSRLVMDDTSICFINVHLAAGQSQKAS 1061

Query: 174  ENTYSP---SCSLLSQQAQWL---KDWITQKKESLVPFVIAGDFNRKINYLGN------- 220
             N           +   A  L                  + GD N +I+           
Sbjct: 1062 RNADLAGILEDKAIFPPADELPFVHGGCGTGILDHEMVFLNGDLNYRIDQRRENVISSIA 1121

Query: 221  ---------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                     +D   K +  N +      E+     A     N    DY     ++ K  I
Sbjct: 1122 NGELAYLLEHDQLRKEMRTNHAFRLRNFEEAPITFAPTYKYNPGTHDY----DSSEKRRI 1177

Query: 272  QESFSEILYNED------DIKSRGKRLSDHCPISIDYD 303
                  ILY +       + +     +SDH P+S  Y 
Sbjct: 1178 PAWCDRILYKKSPRVQALNYQRYEPTVSDHRPVSAGYT 1215


>gi|326924268|ref|XP_003208352.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1-like,
           partial [Meleagris gallopavo]
          Length = 863

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 70/313 (22%), Gaps = 65/313 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYNAVAKV 83
           + +WN+N  S   G+  W                       D   +  QE+         
Sbjct: 205 VGTWNVNGQSPDSGLEPWLACD---------------TEPPDFYCIGFQELDLSTEAFFY 249

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTA-------IAVRKKNVRVLQQSYPLLGAKDS 136
           F       + +      H +                 +  RK  +  +++          
Sbjct: 250 FDSAKEQEWLAAVERSLHPQAKYKKVQMVRLVGMMLLVFARKDQLSNIREVVTESVGTGI 309

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             + GN+  V +    +     +++ HL +        N                     
Sbjct: 310 IGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVTPDGTLPQ 369

Query: 197 QKKESLVPFVIAGDFNRKINYLG--------------------------NNDDFWKTIDP 230
                    +  GD N ++                               +   +     
Sbjct: 370 YNIMKHDVVIWLGDLNYRLCIPDANEVKSLISKNELQKLLMYDQLNIQRIHKKAFADFIE 429

Query: 231 NDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
            +       + DS+ +   +          D  +            + +++ Y       
Sbjct: 430 GEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGG--------NINQLHYRSH---- 477

Query: 288 RGKRLSDHCPISI 300
              + SDH P+S 
Sbjct: 478 MDLKTSDHKPVSA 490


>gi|269140171|ref|YP_003296872.1| endonuclease/exonuclease/phosphatase [Edwardsiella tarda EIB202]
 gi|267985832|gb|ACY85661.1| endonuclease/exonuclease/phosphatase [Edwardsiella tarda EIB202]
          Length = 260

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 85/288 (29%), Gaps = 71/288 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                +R++ WNI                ++     ++L++Y +     +V LQE  +  
Sbjct: 37  PTDDALRIMVWNIF--------------KQQRADWLSVLKEYGRRSQ--LVLLQEAQTTP 80

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + + F  + +                               V  L  ++P+        
Sbjct: 81  ELVR-FATSHYLTADQVPAFSLPQHPSG--------------VMTLAAAHPIYCCPLREK 125

Query: 139 RAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R A   LV +    +G+ + V++IH  +F     + +             + L   
Sbjct: 126 EPLIRLAKSALVTVYPLFDGRLLMVVNIHAVNFSLGVEVYS-------------KQLDPI 172

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             Q      P ++AGDFN   N           +    S +   +   +  +        
Sbjct: 173 GEQIALHKGPVIMAGDFNAWSNRR------LNALRRFASGMELREVHFTNDHRRTAFGRP 226

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
             +D+          +++ S                + SDH P+ +++
Sbjct: 227 --LDFVFYRG---LGVVEASVLVT------------QASDHNPLLVEF 257


>gi|156836046|ref|XP_001642263.1| hypothetical protein Kpol_237p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156112746|gb|EDO14405.1| hypothetical protein Kpol_237p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 503

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/234 (10%), Positives = 69/234 (29%), Gaps = 26/234 (11%)

Query: 24  VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
             L+++N +     +  +        +      +L    ++ ++D++ LQE+        
Sbjct: 102 FTLMTYNCLAQALIRRKLFPDSGEAVKWFRRSKVLLYEFQHYNSDVICLQEIDHIQY--- 158

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG- 141
              +  W + +      +   R ++ +   AI  +++  ++  +       + S      
Sbjct: 159 ---QAFWKVEFEKLGYESQFHRIASKNHGVAIVWKREMFKMTDRMLIDFDKETSSDIPPR 215

Query: 142 ---NRRAVELLVEINGKKI---------WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
              N   + L ++ + K +           + I      +        +  C +L  + +
Sbjct: 216 TRTNNTGLILSLKFSDKILSTLPKNTKTTGIIIGTTHLFWHPFGTYERTRQCYVLLNKMK 275

Query: 190 WLKDWITQKKESLV------PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
                +   +               GDFN +           K I+  +     
Sbjct: 276 EFMHRVNVLQNGNDGDLSHWVPFFCGDFNSQPFDSPYLSMTSKPIEYTERAKTV 329


>gi|332217993|ref|XP_003258144.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase A
           isoform 1 [Nomascus leucogenys]
          Length = 638

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 80/326 (24%), Gaps = 51/326 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                   ++ +V+WN+ T    + V+   +      SD   +           + LQE+
Sbjct: 48  AALGPSEPRITVVTWNVGTAMPPDDVTSLLHLGGGDDSDGADMIA---------IGLQEV 98

Query: 75  GS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129
            S     +      + W   +       +    S+  +   I +   +  ++  L+    
Sbjct: 99  NSMLNKRLKDALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQT 158

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      GN+  V + +   G  +  L+ HL +             +   +    Q
Sbjct: 159 DCTRTGLGGYWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQ 214

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND--------------------------D 223
             +    Q           GD N +I     +                            
Sbjct: 215 QFQGPGAQGILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWP 274

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFS 276
             K             + D   N        R     D  +              ++S  
Sbjct: 275 ILKGFQEGPLNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPGGGPSPSGRKSHR 334

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
             +            +SDH P++  +
Sbjct: 335 LQVTQHSYRSHMEYTVSDHKPVAAQF 360


>gi|224613324|gb|ACN60241.1| Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 1 [Salmo
           salar]
          Length = 704

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/309 (10%), Positives = 81/309 (26%), Gaps = 38/309 (12%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+   S    ++ W     +  +       +    D  +V  QE        +   
Sbjct: 91  VGTWNMGNASPPHSIASWFQCKGQGKTR-DDTADHI-PHDIYVVGTQE--DPLGEKEWID 146

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145
                +  +T+         +  +I   +  + ++   +   +         +  GN+ A
Sbjct: 147 TLKSALRGTTDISFKQIAIQTLWNIRIVVLAKPEHENRISHIFSDSVKTGIANALGNKGA 206

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV-- 203
           V +    NG     ++ HL S       +   + +   + +        +     +    
Sbjct: 207 VGVSFMFNGTSFGFVNSHLTSGS---EKKIRRNQNYVSILRFLNLGDKKLNPFDITHRFT 263

Query: 204 PFVIAGDFNRKINYLGNN------------------DDFWKTIDPNDSLIRFPKEKDSRC 245
                GD N +I                         D          +     E++   
Sbjct: 264 HLFWLGDLNYRIELPSTEAESIVTKIKQQQYQELLCRDQLTIEKGEGKVFLHYDEEEITF 323

Query: 246 NANKNLRNKIPIDYFVMD----------QNAYKFLIQESFS-EILYNEDDIKSRGKRLSD 294
                        Y               +    ++++S+    ++ +    +     SD
Sbjct: 324 APTYRFERDTRERYAYTKAKATGTKYNLPSWCDRVLRKSYPLVHVFCQSYGCTNDIMTSD 383

Query: 295 HCPISIDYD 303
           H P+   ++
Sbjct: 384 HSPVFSTFE 392


>gi|170092537|ref|XP_001877490.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647349|gb|EDR11593.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 313

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 92/299 (30%), Gaps = 38/299 (12%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + + + SWN++ LS +         V R     + + +      +DI+FLQE+      
Sbjct: 36  PKPLTITSWNVDALSSR--------PVARARHILSHILE--GQRSSDIIFLQEVNLDVRA 85

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD----- 135
           + +        F +T+     +         T ++  +    +  Q        +     
Sbjct: 86  SILNDPRVRSAFLTTDAEDQTAFAGVPFATMTLLSSARFASSLDSQEEGETEGGEKLELG 145

Query: 136 -----SFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                       R  + + + +     + + ++++HL S             +    +QQ
Sbjct: 146 RVFRVILPSKYGRDGLCVEIVLPTATDRVLRLINVHLDSLW----------DTLPYRAQQ 195

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF---PKEKDSR 244
            + L D + +   S    +IAGDFN          +    +D   +L  +          
Sbjct: 196 LEMLADVLHEPGCSGG--IIAGDFNAVTAEDQELLEKNGLVDAWLALHGWGNLDAATWGV 253

Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
               ++ R    +D   M       +       I       +S     SDHC +   + 
Sbjct: 254 GVGRRDGRGPRRLDKVAMVGLEACKMEVLRPGVIELPIPKGESINSPWSDHCGLRCTFT 312


>gi|58265498|ref|XP_569905.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57226137|gb|AAW42598.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1288

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 79/279 (28%), Gaps = 57/279 (20%)

Query: 63  NLDADI--VFLQEM---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            +  DI  +  QE+          +  A  +++ K     F   +   +        D  
Sbjct: 635 KVKPDIYMIAFQEIVELTAGQILQTDPAKKRMWEKFIMDTFAMRKGGKDSDYVLFRGDQL 694

Query: 112 TAIA----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
              A    V+K  V  ++              +GN+  V + + +    +  +  HL + 
Sbjct: 695 VGTALIIVVKKHLVPHIRNVESATKKTGLQGLSGNKGGVAIRLNLYDSTVCFVTCHLAAG 754

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------ 221
               S     +     +    ++L+  +    E     + A DFN +++           
Sbjct: 755 ---HSNVGDRNADWRTVVGGTRFLRGKV---IEDHEIIIWAADFNYRVSLPNLEVRDLVK 808

Query: 222 ----------DDFWKTIDPNDSLIRFPKEK---DSRCNANKNLRNKIPI----DYFVMDQ 264
                     D   K +D  +  + + +           + +   K  I    D  +   
Sbjct: 809 ANSLDALLGADQLLKAMDAGEVFMGYDEGPIRFPDNGTDSYDTSEKQRIPAWTDRVLFKG 868

Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           +A +               +        SDH P+   ++
Sbjct: 869 SALRL-------------HEYTRAELMTSDHRPVYAVFE 894


>gi|41387375|gb|AAS01598.1| cytolethal distending toxin B [Campylobacter jejuni]
          Length = 265

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/298 (10%), Positives = 87/298 (29%), Gaps = 39/298 (13%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +   + F +       +   + +WN+   S         +           +RQ  
Sbjct: 1   MKKIICLFLSFNLAFANL--ENFNVGTWNLQGSSAATESKWSVS-----------VRQLV 47

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              +  DI+ +QE      + +        +      +  +       + +     R   
Sbjct: 48  SGANPLDILMIQEA---GTLPRTATPTGRHVQQGGTPIDEY-------EWNLGTLSRSDR 97

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           V +      +   + + +     +A E++V      +    I +++        +  +  
Sbjct: 98  VFIYYSRVDVGANRVNLAIVSRTQAEEVIVLPPPTTVSRPIIGIRNGNDAFFNIHALANG 157

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
            + +      +           V ++IAGDFNR  +         + +     ++     
Sbjct: 158 GTDVGAIITAVDAHFANM--PQVNWMIAGDFNRDPST--ITSTVDRELANRIRVVFPTSA 213

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
             +             +DY +   +  +          +     ++S    +SDH P+
Sbjct: 214 TQASGGT---------LDYAITGNSNRQQTYTPPLLAAILMLASLRS--HIVSDHFPV 260


>gi|321259397|ref|XP_003194419.1| hypothetical protein CGB_E5550W [Cryptococcus gattii WM276]
 gi|317460890|gb|ADV22632.1| conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 1297

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 97/338 (28%), Gaps = 72/338 (21%)

Query: 26   LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIV--FLQEM-----GSY 77
            + +WNI         S     +  + ++   L    +++D  DI+    QE+       Y
Sbjct: 931  ICTWNI--------DSAKPTDLNGSVANARFLEDVLRSVDSPDIIVFGFQEVIPLTDKKY 982

Query: 78   NAVAKVFPKNTWCIFYSTERLINHSKRD------------------------SNNDIHTA 113
             A   +F   +     S +++ +  +                          S   + T 
Sbjct: 983  TAKTLLFGNKSKDGGASADKISHAYRHWLEKLQSAVKMAFPSDCPYVKIHSESLVGLFTC 1042

Query: 114  IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            I V++     L+        +      GN+ A+     ++   I  +++HL +     + 
Sbjct: 1043 IFVKQSEKDFLRDLDITTVKRGIGGIYGNKGAIVSRFVVDDTSICFINVHLAAGQSQKAS 1102

Query: 174  ENTYSP---SCSLLSQQAQWL---KDWITQKKESLVPFVIAGDFNRKINYLGN------- 220
             N           +   A  L                  + GD N +I+           
Sbjct: 1103 RNADLAGILEDKAIFPPADELPFVHGGCGTGILDHEMVFLNGDLNYRIDQRRENVISSIA 1162

Query: 221  ---------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                     +D   K +  N +       +     A     +    DY     ++ K  I
Sbjct: 1163 NGELAYLLEHDQLRKEMRTNHAFRLRNFAEAPITFAPTYKYDPGTHDY----DSSEKRRI 1218

Query: 272  QESFSEILYNED------DIKSRGKRLSDHCPISIDYD 303
                  ILY +       + +     +SDH P+S  Y 
Sbjct: 1219 PAWCDRILYKKSPRVHALNYQRYEPTVSDHRPVSAGYT 1256


>gi|147844159|emb|CAN80562.1| hypothetical protein VITISV_040289 [Vitis vinifera]
          Length = 585

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 51/178 (28%), Gaps = 27/178 (15%)

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
             D  + +GNR    + V     K+                       C  L ++   ++
Sbjct: 303 DADRSAESGNRCWDLVEVNCVDNKVQECGKWCCPGFHGSLWFFFQRREC--LWEEIGAIR 360

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDD---------FWKTIDPNDSLIRFPKEKDS 243
                      P+ + GDFN  ++    +           F + ID    +    +E   
Sbjct: 361 GIWE------EPWCLGGDFNIILSQRERSRQGRITSAMRRFAQIIDDLGLVDLPLQEGLF 414

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
             +   N ++   +D F+M  +            +              SDH PI ++
Sbjct: 415 TWSGGLNNQSWARLDRFLMTLSWLDQFSNVIQGRLPQPT----------SDHFPILLE 462


>gi|87120572|ref|ZP_01076466.1| Uncharacterized conserved secreted protein [Marinomonas sp. MED121]
 gi|86164215|gb|EAQ65486.1| Uncharacterized conserved secreted protein [Marinomonas sp. MED121]
          Length = 368

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/363 (10%), Positives = 89/363 (24%), Gaps = 84/363 (23%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT-----LLRQYAKNLDADIVFLQEMGSYN 78
           VR+ ++N        G      +  +  SD+       +    +    DI+ L E     
Sbjct: 3   VRVATYNTALNRPFAGALAQALTQDKENSDFLDSQAVAVALVIRFNRPDILLLNEFDYDV 62

Query: 79  A------------------VAKVFPKNTWCIFYSTE------------------RLINHS 102
                               + + P  ++   +S                         +
Sbjct: 63  DNIGLAAFCENYLENPSLPGSALAPPISYAYRFSAPVNTGLASGRDFDKDGIASDQGADA 122

Query: 103 KRDSNNDIHTAIAVRKKNVRVL---QQSYPLLGAKDSFSRAGNRRAV------------- 146
               +      +AV  ++  ++   +     L ++   ++   R +              
Sbjct: 123 LGFGDFPGQYGMAVLSQHPILIEKFRSFQHFLWSRMPSAKLPQRSSEQGGGWFDEADLAV 182

Query: 147 ---------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWI 195
                    +L +++   ++ +L  H     F          +   +     +++  D++
Sbjct: 183 LPLSSKSHWDLPIQLEDLELHLLCSHPTPPVFDGEERRNACRNHDEIRFWHDYIQGEDYM 242

Query: 196 TQKK------ESLVPFVIAGDFNRKINYLGNNDDFWKTI------DPNDSLIRFPKEKDS 243
                          FV+ GD N  +          + +         D          S
Sbjct: 243 EDDAGLVGGLAKNAEFVVLGDLNASLKEGDAFSQSLRHLMQGLNIKHQDLPTSLGGFAHS 302

Query: 244 RCNAN-KNLRNKIPI--DYFVMDQ-NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                 K       +  DY +       +F I             + +     SDH  I 
Sbjct: 303 PKKPWAKWHTASWRLCADYVLYPNWPHSRFSIHNQAVFWPKKSHPMSASVLHASDHRMIY 362

Query: 300 IDY 302
           +D 
Sbjct: 363 LDL 365


>gi|319441036|ref|ZP_07990192.1| Endonuclease/exonuclease/phosphatase [Corynebacterium variabile DSM
           44702]
          Length = 255

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 75/278 (26%), Gaps = 60/278 (21%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           ++L+S+N++  +                     L   A   D D + LQE  +     ++
Sbjct: 1   MKLISYNLHHNNAAG-----------------ELTPLAALHDPDALCLQEADTETLPTRI 43

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
                           +           +    R      L++S   L  K    R    
Sbjct: 44  GDLE-----LVQSTSGSRLGLAVYLRT-SRFDPRSMLTVPLEKSLHDLVMKPGEERLATV 97

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
           RA + +    G ++ +   H       +S          L  QQ +     +       +
Sbjct: 98  RAHDAV---RGGEVLISSFHAAPLTASNS----------LRRQQIRTAFSAL-HDLGPGL 143

Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263
           P ++ GDFN           F   +  + S   +                +   D  +  
Sbjct: 144 PSMMVGDFNYP--------VFQAGLARHVSSYGYDLSSSDTSTYRNYGVLRGRYDLAMSR 195

Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
                           Y +  + S  +  SDH PI ++
Sbjct: 196 G---------------YLDPTVTSLPQEGSDHLPILVE 218


>gi|149909318|ref|ZP_01897974.1| predicted extracellular nuclease [Moritella sp. PE36]
 gi|149807635|gb|EDM67583.1| predicted extracellular nuclease [Moritella sp. PE36]
          Length = 944

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/423 (10%), Positives = 89/423 (21%), Gaps = 142/423 (33%)

Query: 24  VRLVSWNINTLSEQE--------GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
           +++ + N+  L            G +   N+          L +    LDADIV L E+ 
Sbjct: 379 IKIATQNVLNLFNSPFGGADNLHGGNRGANTELEYLHQKAKLVEAVYGLDADIVGLMEIE 438

Query: 76  SYNA-----VAKVFPKNTWCIFYSTERLINHSKRDS-----------------------N 107
           +        +A+         +       N  +                          +
Sbjct: 439 NNGFSDTGTIAEFVDAINAKYYNPRPEDKNDPESYVNKYVFIGFDSNDDTVLDELDSIGS 498

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKD--------------------SFSRAGNRRAVE 147
           + I + I  R   V +       +  +                            R  V 
Sbjct: 499 DVITSGIIYRPSKVSIKSTKIIPMPQQHAPVTRDENGNAVIDQKGLVLESGDNYQRDTVT 558

Query: 148 LLVEIN--GKKIWVLDIHLKSFCF-------------------LDSLENTYSPSCSLLSQ 186
               +N  GKK+ V   H KS                           +  +     L  
Sbjct: 559 ATFVVNQTGKKLTVAVNHFKSKGSTCHEDWAGVDFSADQFNSAGQYTNDDGNDDAPDLDF 618

Query: 187 Q-------AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
           Q                + ++     V+ GD N              T +      R   
Sbjct: 619 QGQCENFRVAAAVQLGDELEKIGGDRVVIGDMNSYAKEDPILVLTKNTTNKVIKTARDTF 678

Query: 240 EKDSR-------------------------------CNANKNLRNKIPIDYFVMDQNAYK 268
              +                                  +     +   +D+ ++  +   
Sbjct: 679 IGKTPQFSKSGDPVVVEKTYGYISAVGKKDEERGEVSWSYAYDDSIGSLDHILITPSLES 738

Query: 269 FLIQESFSEILY---------------------------NEDDIKSRGKRLSDHCPISID 301
            LI  +   I                             + + +     R SDH P  + 
Sbjct: 739 RLIDATDWHINAAESVYYDYSTYRLDETNGLVFSKGENGSTNFVVDDAYRSSDHDPAIMS 798

Query: 302 YDF 304
             +
Sbjct: 799 MSY 801


>gi|206579771|ref|YP_002240308.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella
           pneumoniae 342]
 gi|290509923|ref|ZP_06549293.1| hypothetical protein HMPREF0485_01693 [Klebsiella sp. 1_1_55]
 gi|226706238|sp|B5Y1G7|Y4510_KLEP3 RecName: Full=UPF0294 protein KPK_4510
 gi|206568829|gb|ACI10605.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella
           pneumoniae 342]
 gi|289776639|gb|EFD84637.1| hypothetical protein HMPREF0485_01693 [Klebsiella sp. 1_1_55]
          Length = 265

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 83/289 (28%), Gaps = 71/289 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  +K+R++ WNI                K+  +++  + +     DA +V LQE  +  
Sbjct: 39  SSDEKIRVLVWNIF---------------KQQRAEWQSVLKNFGK-DAHLVLLQEAQTTP 82

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +    N                  ++      +      V  L  ++P+        
Sbjct: 83  ELVRFATSN---------------YLAADQVPALVLPQHPSGVMTLASAHPIYCCPLRER 127

Query: 139 RAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R     LV      + + + V++IH  +F     + +             + L   
Sbjct: 128 EPILRLPKSALVTVYPLPDARLLMVVNIHAVNFSLGVDVYS-------------KQLLPI 174

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             Q      P ++AGDFN         +  ++             +   R          
Sbjct: 175 GDQIAHHSGPVIMAGDFNAW--SRPRMNALYRFAREMSLREVRFSDDQRR------RAFG 226

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            P+D+                     +  D      R SDH P+ +++ 
Sbjct: 227 RPLDFVFYRG---------------LSVHDASVLVTRASDHNPLLVEFS 260


>gi|322696463|gb|EFY88255.1| exonuclease III [Metarhizium acridum CQMa 102]
          Length = 522

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/314 (10%), Positives = 80/314 (25%), Gaps = 69/314 (21%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+++ N+            K               +  + D D+V LQE   ++ + +
Sbjct: 240 SIRVLTLNLWLGGRNVIDYHNKQ------------VSFLASQDVDVVALQESYFHDGL-R 286

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAG 141
           +     W  + S                   +++  +     + +     G         
Sbjct: 287 LAKALGWNAWQSK-----------------DVSILSRYPIGRVYREIEAGGTVRIDLDGS 329

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
           +R+ +   V +N       D+   ++              +   QQ   +   + + K  
Sbjct: 330 DRQLLVWNVHLNNAPYGPYDLCFTNYSTN---YIQRREEWARRVQQVYEIVHRLKEYKVR 386

Query: 202 LV-----PFVIAGDFNRKINYL---GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN--- 250
                  P ++AGDF+   +        D   K  +         +        +     
Sbjct: 387 KPEFQELPQILAGDFSSPSHLDYNKKTRDLHCKGREDPFPWPVSRRTVLDGKWTDSFREV 446

Query: 251 ----------------------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
                                       ID+    +   K L  +         +   + 
Sbjct: 447 YRNAWKVPGNTWSPIRKVNGDRPEPMDRIDFIYHKK--LKTLHSDVVVVGDPKPEPYHAD 504

Query: 289 GKRLSDHCPISIDY 302
            +  SDH  +  ++
Sbjct: 505 NEWTSDHAAVLSEF 518


>gi|290971171|ref|XP_002668401.1| predicted protein [Naegleria gruberi]
 gi|284081790|gb|EFC35657.1| predicted protein [Naegleria gruberi]
          Length = 474

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 65/214 (30%), Gaps = 21/214 (9%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P        +   S+N++  S   G            S+ T L +Y    + DIV L E+
Sbjct: 9   PPPPESNNLLSCCSFNVHHFSTAYG-----------RSNLTELYKYLHKNNFDIVCLNEV 57

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
              +  +       + +  S    +  ++        T          ++   YP+L  +
Sbjct: 58  YEDSEYSHPLRDLVYALNSSLPEEVEVARPYQYRSGPTNYESN-----IILSKYPILFQE 112

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                 G R  + + ++     +  + +        +          S +       +  
Sbjct: 113 KKDVGRGERSVLGIKIDHP--LVRNVFVTHLDHVSENKRVLQLKRVLSFMKHFID--RKL 168

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228
           +    +    F++ GDFN  +      D FW  +
Sbjct: 169 VDYPNDENKNFILLGDFN-SMRMDDYTDKFWDYL 201


>gi|145529492|ref|XP_001450529.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418151|emb|CAK83132.1| unnamed protein product [Paramecium tetraurelia]
          Length = 868

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/315 (12%), Positives = 86/315 (27%), Gaps = 64/315 (20%)

Query: 22  QKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
           QK +L  ++WN+N      G  +              +  +       ++ LQE+  Y A
Sbjct: 521 QKFKLFALTWNVN------GNLILNLQKDVLEFHQDYIPDFI------VISLQEIQQYKA 568

Query: 80  VAKVFPKNTW-----CIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
              +               S+  +          +    + +    +   V+++ +    
Sbjct: 569 HKIIGQNQDIVNEWIKSIESSINMNGKQFCLVQQENLVGMLILIYSKVSLVQLINKISTD 628

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS--CSLLSQQA 188
                    +GN+ A  +  +I   +I V + HL S    +                 Q 
Sbjct: 629 RIKTGLEGHSGNKGACLIRFQIKDSQIAVCNCHLASGYSKNKRRMESLEEIHEKAFKNQM 688

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYL--------GNNDDFWKTIDPNDSLIRFPKE 240
           + L        +S    ++ GD N ++N                 ++ +          +
Sbjct: 689 KPL--------DSSDYTLLMGDMNFRLNSNQATTLDLIEQQKQAEQSYEAKAKYPLQEYQ 740

Query: 241 KD-----SRCNANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
           +           N N               D   +     K   Q    ++ Y   +   
Sbjct: 741 EACITFLPTYKLNANHTYQTKKQEQIPSYCDRIFI-----KTNEQALIKQLFYKSIERFD 795

Query: 288 RGKRLSDHCPISIDY 302
                SDH P++  +
Sbjct: 796 -----SDHLPVTAMF 805


>gi|62087472|dbj|BAD92183.1| arachidonate 5-lipoxygenase variant [Homo sapiens]
          Length = 368

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 73/292 (25%), Gaps = 76/292 (26%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           + +++ N+N L+                     L  + K+ D  +  +QE         +
Sbjct: 13  ITILTINVNGLNAP--------------IKRHRLANWIKSQDPSVCCIQE-------THL 51

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              +T  +              S       +A+                           
Sbjct: 52  MCGDTHKLKIKGLEEDLP----SKWKTKAGVAIL-------VSDKTDFKPTKIKRDKEGH 100

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             + +   I  +++ + +++  +                 + Q  + L+  +        
Sbjct: 101 YIM-VKGSIQQEELTIRNVYAPNTGAP-----------RFIKQVLRDLQRDLDSH----- 143

Query: 204 PFVIAGDFNRKINYLGN-------------NDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250
             +I  DFN  ++ L               N    +    +      PK  +    +  +
Sbjct: 144 -TIIMRDFNTPLSTLDRSMRQKVNKDIQELNSALQQAELIDIYRTLHPKSTECTFFSALH 202

Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                 ID+ V  +                     ++    LSDH  I ++ 
Sbjct: 203 HTYSE-IDHIVGSKALLSKCK------------RTETITNCLSDHSAIKLEL 241


>gi|228964132|ref|ZP_04125256.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228795566|gb|EEM43049.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 640

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 35/154 (22%), Gaps = 32/154 (20%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNA 79
            K+ + ++NI   S            + T      L    K      DI+ ++EM   N 
Sbjct: 493 DKLTVATYNIENFSAN--------KKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNG 544

Query: 80  ----------------VAKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122
                           +  V         +       N        +I          V+
Sbjct: 545 SINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNLDGGAPGANIRVGFFYNPSRVK 604

Query: 123 VLQQSYPLLG-----AKDSFSRAGNRRAVELLVE 151
           +      L         +S      R+ +     
Sbjct: 605 LAAVPKLLDKNVVRIGDESSLFESTRKPLAAEFT 638


>gi|167521309|ref|XP_001744993.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776607|gb|EDQ90226.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1203

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/286 (9%), Positives = 75/286 (26%), Gaps = 41/286 (14%)

Query: 8    ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67
            AL    V  + +    +R+++ N++   +            R+      + +       D
Sbjct: 814  ALPSLQVTTSNTCRSDLRVMTLNVHEFFD----------PSRSRLLNHEVNKCVSLFAPD 863

Query: 68   IVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNV 121
            ++ LQE+          + P ++                      +       A+  ++ 
Sbjct: 864  VICLQEVKHPLPAGREPLRPSSSSDHTALDALAAQVGDTFPFFKAYPNATIGNAILARHA 923

Query: 122  RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181
                + +         +       + ++       + V+  HL S    D L+   S   
Sbjct: 924  SEQTEVFHD-------NTGCQNTVLRVVKGFESCDLAVVSTHLTSQTDCDRLQLVESLRK 976

Query: 182  SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-----------NNDDFWKTIDP 230
             L     + L     + + + +P ++   FN                   +   ++ +  
Sbjct: 977  CLRGYFKRPLTADCHELQLTCLPHILCVSFNASPERTSEAPSPSDRLDIPSHIVYEYLTQ 1036

Query: 231  NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276
                +    E     + +          Y +  +  +  +      
Sbjct: 1037 TKGYVDLNTESLQSTSQHSKA-------YILCSRALWCRVKSHHLH 1075


>gi|134080888|emb|CAK46405.1| unnamed protein product [Aspergillus niger]
          Length = 1094

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 86/313 (27%), Gaps = 38/313 (12%)

Query: 19  SVAQKVRL--VSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQY----AKNLDADIVF 70
           S ++ V +   ++N+          +  W      + ++  L+          L    + 
Sbjct: 599 SYSRPVTVWTGTFNVNGRHEGPDGDLKAWLFPECDSQAEDPLIYAVGFQEIVTLSPQQIM 658

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSY 128
             +  +  A              S      +    S   + +A+ +  R+  +  ++   
Sbjct: 659 STDPTTRKAWEIAVHTCLNKRADSK-GTPKYVLLRSGQLVGSALMIYAREDALSDIKNVE 717

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
             +        AGN+    +  E +  ++  +  HL +        N             
Sbjct: 718 GNVKKTGLSGMAGNKGGCAIRFEYSNTRLCFVTAHLAAGFANYDERNRDYE------TIL 771

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYL----------------GNNDDFWKTIDPND 232
           + L+    +  E     +  GDFN +I                    +ND     +    
Sbjct: 772 RGLRFLRNRSIEDHDAVIWLGDFNYRIGLSNQKARELVQQQDFQTLYDNDQLNLQMVAGR 831

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGK 290
           +   + +   S     K        D     +      +  +  +      + +  S   
Sbjct: 832 AFQFYTEGPISFPPTYKYNIGSNDYD---TSEKARIPAWCDRILWRGTNLRQINYGSADL 888

Query: 291 RLSDHCPISIDYD 303
           R+SDH P+   + 
Sbjct: 889 RISDHRPVWAMFT 901


>gi|27085405|gb|AAN85438.1| inositol 5-phosphatase 2 [Dictyostelium discoideum]
          Length = 1800

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 85/327 (25%), Gaps = 86/327 (26%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA--KNLDADIV--FLQEMGSYNAVA 81
           + +WN                          L  +    +   DI+   LQE+ +  A A
Sbjct: 449 VGTWN------------------CNAKRTQNLANWILTNSFAPDIIVLGLQEIVNMKAGA 490

Query: 82  ------------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI------AVRKKNVRV 123
                       K    + W         ++   R         +       V++++   
Sbjct: 491 IVKATAADKQNNKENAYHPWKHDIEQTLSLSSGGRYVKVMNKVLVGLMILVYVKEEHAPY 550

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
           + +    +       + GN+  + +   +    I  ++ HL +    + +E        +
Sbjct: 551 ISEVSGAVVPCGMMGKIGNKGGLGVRFTLYKTGICFVNSHLAAGPSHEKMERRTQDYKKI 610

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKT 227
                +     +          +  GD N +I+   +                +D     
Sbjct: 611 QMMTFENHLSMLDH-----ECLIWFGDLNYRIDLPYSETKALIEQKNWQKLQAHDQLNNE 665

Query: 228 IDPNDSLIRFPKEKDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESF 275
                + I F +E  +   + K              R     D  +            S 
Sbjct: 666 RKAGKAFIGFKEELTNFAPSYKYDIGVNQYDTSEKNRTPSWCDRIIYRGE--------SL 717

Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302
            +I Y   ++       SDH PIS  +
Sbjct: 718 KQISYQRHELME-----SDHRPISAIF 739


>gi|298711767|emb|CBJ32798.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 172

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 50/165 (30%), Gaps = 20/165 (12%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           + F  VP +    + VR+V++N+                +R   +   + +  K+L+ADI
Sbjct: 1   MSFIFVPKSTGQ-RTVRVVNFNVYM-----------GYDRRGEDNTFRVGRLLKDLEADI 48

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
             LQE      +        +    +    +  +      +     A+  +   +     
Sbjct: 49  AGLQE---TGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWR 105

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            L       +       V   + + G       +++      D+ 
Sbjct: 106 RLPRGPGENAC-----VVHATLSLGGGMGVATVVNVHLGNEGDTE 145


>gi|296191683|ref|XP_002743729.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase A
           isoform 1 [Callithrix jacchus]
          Length = 1007

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 79/317 (24%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      SD   +           + LQE+ S     + 
Sbjct: 426 ITVVTWNVGTAMPPDDVTSLLHLGGGDDSDGADMIA---------IGLQEVNSMINKRLK 476

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S+  +   I +   +  ++  L+             
Sbjct: 477 DALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 536

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +    Q 
Sbjct: 537 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAQG 592

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 593 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKSTWPILKGFQEGP 652

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFVMD----QNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              +ES    +      
Sbjct: 653 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKPPGGGPSPSGRESHRLQVTQHSYR 712

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 713 SHMEYTVSDHKPVAAQF 729


>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
 gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
          Length = 1216

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/324 (10%), Positives = 81/324 (25%), Gaps = 77/324 (23%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYN 78
           +    + ++N+        ++ + +S  R    Y  L     + +A  D++ LQE+    
Sbjct: 263 SNNFTVSTYNV--------LAEFTSSPPR--DRYEALVHNILSSNALADVLVLQEVCDNF 312

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            +  +  ++    +         +           +   +  V   Q  +          
Sbjct: 313 LLFLLSHQDIQRRY------PFVTHGPPGQGGSPPLPSLRNIVVFSQWRFTWAWLPFDER 366

Query: 139 RAGNRRAVELLVEINGK-----KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 A  + ++  G       + ++ +HL S             +      Q   +  
Sbjct: 367 HK---GAAVVKIDGIGDLRSSLPLVIVAVHLTSGLND--------AAVDSKLSQVTSIIH 415

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDS------------LIRFPKE 240
            +     S  P V+AGDFN   +    ++    K I P                      
Sbjct: 416 LLDSDYHSN-PSVVAGDFNFVTSQEVIDEALRLKMISPAGLEKILGFDCLLSKAHFMDGW 474

Query: 241 KDSRCNA----------------------------NKNLRNKIPIDYFVMDQNAYKFLIQ 272
             +                                          D   + Q     +  
Sbjct: 475 AVAGEGPEDAGIHGGTGEGEQGATFDPILNPLAAQYSVNGRPQRYDRIFVRQTGKTSVTD 534

Query: 273 ESFSEILYN-EDDIKSRGKRLSDH 295
            +F  + +  + +     +  SDH
Sbjct: 535 FNFVGLRHALKGENLQISEFASDH 558


>gi|237797784|ref|ZP_04586245.1| exodeoxyribonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020634|gb|EGI00691.1| exodeoxyribonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 259

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/274 (9%), Positives = 70/274 (25%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACEAEVPAQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       S       D + R          ++ +  K+ +  +   S    D   
Sbjct: 69  ALYSRLQPKAVISGLGFETADRYGRY---------LQADFDKVSIATLLFPSGMSGD--- 116

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF----------------NRKINYL 218
                  +   +       ++ +++     ++  G                         
Sbjct: 117 ----EDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDVKNWRDSQQSPGFLA 172

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQNAYKFL 270
                  + +     +    +        +    N            DY ++     +F+
Sbjct: 173 PERAWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RSA-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|300797813|ref|NP_001179295.1| phosphatidylinositol 4,5-bisphosphate 5-phosphatase A [Bos taurus]
 gi|297484962|ref|XP_002694673.1| PREDICTED: inositol polyphosphate-5-phosphatase J [Bos taurus]
 gi|296478388|gb|DAA20503.1| inositol polyphosphate-5-phosphatase J [Bos taurus]
          Length = 639

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 80/326 (24%), Gaps = 50/326 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                +  ++ +V+WN+ T    + V+   +    T+ D               + LQE+
Sbjct: 47  SAPVPLEPRITVVTWNVGTAMPPDDVTSLLHLGS-TSDDSDR-ADMIA------IGLQEV 98

Query: 75  GS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129
            S     +      + W   +       +    S   +   I +   +  ++  L+    
Sbjct: 99  NSMINKRLKDALFTDQWSELFMDALGPFNFVLVSTVRMQGVILLLFAKYYHLPFLRDVQT 158

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      GN+  V + +   G  +  L+ HL +             +   +    Q
Sbjct: 159 DCTRTGLGGYWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQ 214

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND--------------------------D 223
             +    Q           GD N +I     +                            
Sbjct: 215 QFQGPGAQGILDHDLVFWFGDLNFRIESYDLHFVKFAIDSEQLHQLWEKDQLNMAKNTWP 274

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFS 276
             K             + D   N        R     D  +              +ES  
Sbjct: 275 ILKGFQEGPLNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPGGGPSPSGRESHR 334

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
             +            +SDH P++  +
Sbjct: 335 LQVTQHSYRSHMEYTVSDHKPVAAQF 360


>gi|67598262|ref|XP_666206.1| C0850c [Cryptosporidium hominis TU502]
 gi|54657156|gb|EAL35977.1| C0850c [Cryptosporidium hominis]
          Length = 629

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 69/210 (32%), Gaps = 18/210 (8%)

Query: 22  QKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            ++++V++NI +        +  E  +        +    +LL +   +L+ADI+ LQE+
Sbjct: 235 NRLKIVTFNILSEICAQTDKALNEMYTSCPKYALHSNYRRSLLARELIDLNADIIGLQEV 294

Query: 75  GS---YNAVAKVFPKNTWCIFYSTERLINHSKR--------DSNNDIHTAIAVRKKNVRV 123
            S    + +  +     +   ++++     +          +S+  +   + +      V
Sbjct: 295 QSCLYESFIHILMEFKGYSGVFNSDYASVTTFYKKELFNLLESDTILFKKMLINDYPEIV 354

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            +         +            +++E     +  +  +   +            +  L
Sbjct: 355 KEIKVKWPNFIEYLLDKILTVFQIVVLEHKITDVIYVFANTHFYYHPFGGHVRILQAKLL 414

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
           +    ++LK          V   + GDFN 
Sbjct: 415 MDLIEKYLKRLRLSFPSKEVFTFLFGDFNT 444


>gi|325282033|ref|YP_004254575.1| hypothetical protein Odosp_3443 [Odoribacter splanchnicus DSM
           20712]
 gi|324313842|gb|ADY34395.1| hypothetical protein Odosp_3443 [Odoribacter splanchnicus DSM
           20712]
          Length = 130

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 26/102 (25%), Gaps = 5/102 (4%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +++  L L F L       A+ +   ++N+      + +             Y  +    
Sbjct: 1   MKRIFLCLYFLLTLAAGLQAENLVEATYNLRNAYRSDSLKGND-----WGQHYPYIAGVV 55

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103
           +    DI   QE               +    +       + 
Sbjct: 56  QFYGFDIFGTQESFCDQLQDLKRTLPEYDYIGARGDDGKKAG 97


>gi|295689993|ref|YP_003593686.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
 gi|295431896|gb|ADG11068.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
          Length = 323

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/285 (10%), Positives = 59/285 (20%), Gaps = 67/285 (23%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77
           A  A  ++++ +N    +                       ++     ADI+ + E    
Sbjct: 101 AVAAGDLKVIQFNAWHENYAP----------------EQSLKWLLAQQADIIVMAE--GG 142

Query: 78  NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
            A  ++         + + +                  +  +   +   +          
Sbjct: 143 GAAWRINRGLRAAYPFVSCKSG-----------RCEPWIFSRKKVIASGAV--------- 182

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197
                       +E       VL  H                      QQAQ        
Sbjct: 183 --QKGLPGAWATIEDREGPFTVLGAHYVWPVPAG-------------RQQAQSAMLVKAA 227

Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
            +      ++ GDFN                    S                     +PI
Sbjct: 228 SQFDRRTLIVTGDFNSTPWSFTLKHQDKALGLERWSRALPSWPSGQFSRVAAAPAPFLPI 287

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           D+           ++   +                SDH PI + +
Sbjct: 288 DHVYAGSAWRAVKVERGPAI--------------GSDHRPIIVTF 318


>gi|149235678|ref|XP_001523717.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452696|gb|EDK46952.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 1196

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 83/319 (26%), Gaps = 47/319 (14%)

Query: 19  SVAQKVRL--VSWNINTL---SEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLDADIVFLQ 72
           S  + +++   ++N+N L   S  +  +        +  D   +  Q    L+A  +   
Sbjct: 562 STNENIKIFTGTYNVNALEPSSNVDLTAWLFPPENESLPDIYAIGFQELIELNAGAILNA 621

Query: 73  EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132
           +       A++          S        + +S   +   + V++  V  + +      
Sbjct: 622 DASRPAKWAELLNAQLNSQHGSAHEKYVLLRTESIASMSIFLFVKQSAVHHVTKVSGSYK 681

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                  A N+ A  +  E       ++  HL +               +  S     L 
Sbjct: 682 KTGLGGIAANKGACAVRFEYGATSFSLITSHLAAG------TTAVMERFNDYSTIMNGLV 735

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGN-------------------------NDDFWKT 227
                  +     +  GD N +++                             N   ++ 
Sbjct: 736 FTRNYSIQDHDHVIWFGDLNYRLSLPNYQCRELVENGAFDELIQSDQLTEERRNRGAFQE 795

Query: 228 IDPNDSLIRFPKEKDSRCNANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
            +          + D   +        R     D  +          +    ++ YN   
Sbjct: 796 FNEGLVKFYPTYKFDKGTSDYDTSEKQRTPSWTDRVLF---ISNKKKRNDLQQLNYNS-- 850

Query: 285 IKSRGKRLSDHCPISIDYD 303
                  LSDH P+   ++
Sbjct: 851 --VMDIFLSDHKPVYATFE 867


>gi|27085407|gb|AAN85439.1| inositol 5-phosphatase 3 [Dictyostelium discoideum]
          Length = 1379

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 73/307 (23%), Gaps = 50/307 (16%)

Query: 26  LVSWNI-----------NTLSEQEGV-SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           + ++N+             L             V        L        D+ I    E
Sbjct: 595 VGTYNVGGVHSSYFDLVQWLRPDGANCPTPDFYVLGLQEVVELTAGQILATDSSIGKQWE 654

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                A+ KV P   +    S++ +           +  AI VR+  +   ++       
Sbjct: 655 DAIERALPKVSPNVKYIKLQSSQLVG----------LLMAIYVREDAIHYFREVQIQNVK 704

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 AGN+  + + +  +      +  H  +         +                 
Sbjct: 705 CGMNGLAGNKGGIGVRLLFSDTSFTFVTAHFAAGQSNVEDRISDFREIDSTL----AFGR 760

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIRF 237
               K          GDFN +I+                     D   K ++       +
Sbjct: 761 QGQFKVSDSDYSFWLGDFNFRIDLPDEEIRRCVYDQQFPKLYNYDQLRKCMEAGRVFNGY 820

Query: 238 PKEKDSRCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +E  +     K   N    D                ++  +       +     +    
Sbjct: 821 REETIAFPPTYKYDLNSTQYDTSQKQR---SPAWTDRIVWSNKVHHDLRQLYYHRQEILA 877

Query: 293 SDHCPIS 299
           SDH P+S
Sbjct: 878 SDHRPVS 884


>gi|66801347|ref|XP_629599.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
 gi|60462979|gb|EAL61175.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
          Length = 1379

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 73/307 (23%), Gaps = 50/307 (16%)

Query: 26  LVSWNI-----------NTLSEQEGV-SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           + ++N+             L             V        L        D+ I    E
Sbjct: 595 VGTYNVGGVHSSYFDLVQWLRPDGANCPTPDFYVLGLQEVVELTAGQILATDSSIGKQWE 654

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
                A+ KV P   +    S++ +           +  AI VR+  +   ++       
Sbjct: 655 DAIERALPKVSPNVKYIKLQSSQLVG----------LLMAIYVREDAIHYFREVQIQNVK 704

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                 AGN+  + + +  +      +  H  +         +                 
Sbjct: 705 CGMNGLAGNKGGIGVRLLFSDTSFTFVTAHFAAGQSNVEDRISDFREIDSTL----AFGR 760

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGN----------------NDDFWKTIDPNDSLIRF 237
               K          GDFN +I+                     D   K ++       +
Sbjct: 761 QGQFKVSDSDYSFWLGDFNFRIDLPDEEIRRCVYDQQFPKLYNYDQLRKCMEAGRVFNGY 820

Query: 238 PKEKDSRCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
            +E  +     K   N    D                ++  +       +     +    
Sbjct: 821 REETIAFPPTYKYDLNSTQYDTSQKQR---SPAWTDRIVWSNKVHHDLRQLYYHRQEILA 877

Query: 293 SDHCPIS 299
           SDH P+S
Sbjct: 878 SDHRPVS 884


>gi|260171268|ref|ZP_05757680.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. D2]
 gi|315919578|ref|ZP_07915818.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693453|gb|EFS30288.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 343

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/338 (7%), Positives = 62/338 (18%), Gaps = 77/338 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
             +  ++ WN+                      Y  +      L  D V   E+ +YN  
Sbjct: 24  GNEFTVLQWNVWQEGTMIPGG------------YDAIVNEIVRLKPDFVTFSEVRNYN-- 69

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                             +        +       +  K+      +             
Sbjct: 70  -------HTNFTARVCASLQEKGLQYYSFYGYDTGLLSKHPITDSLTVFPENGDHGSIYR 122

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT------------YSPSCSLLSQQA 188
                    V +    +  LD    +    D                      S      
Sbjct: 123 LTSSVNGRKVAVYTAHLDYLDCAYYNVRGYDGSTWKEIPLPTSVEEILKINVASQRDDAI 182

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNND-------------DFWKTIDPNDSLI 235
           +       +   +    ++ GDFN   +                       T+      +
Sbjct: 183 RLFITQAEKDLANGYAVIVGGDFNEPSHRDWIEKNKNLYDHNGFVVPWTVTTLLEEAGFV 242

Query: 236 RFPKEKDSRCNANKNLRNKI--------------------PIDYFVMDQNAYK------- 268
              ++       +                            ID+     +          
Sbjct: 243 DSYRKIYPNPLTHPGFTYPSDNPAKTPEKITWAPKADERDRIDFVFYKGDGLDAKKAIIF 302

Query: 269 ----FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                +++    +    +  +       +DH  + + +
Sbjct: 303 GPKGSIVRAQRVQETSKDKFLLPLDVWPTDHKGLLVTF 340


>gi|238591986|ref|XP_002392771.1| hypothetical protein MPER_07607 [Moniliophthora perniciosa FA553]
 gi|215459287|gb|EEB93701.1| hypothetical protein MPER_07607 [Moniliophthora perniciosa FA553]
          Length = 114

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
           K+S    V+AGDFN  ++       F   +   + L   P E+          +    +D
Sbjct: 14  KDSEANIVVAGDFNEFVHTRSVFASFEGIMHEVEELAGVPPEER---YTYVFDQFSEQLD 70

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
           +  +     K +++    E ++  +   S   R+SDH P
Sbjct: 71  HMFISGAIGKRVVEA---EHIHVNNWSPSLTVRVSDHDP 106


>gi|317034329|ref|XP_001396144.2| inositol-1,4,5-trisphosphate 5-phosphatase 1 [Aspergillus niger CBS
           513.88]
          Length = 1069

 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 86/313 (27%), Gaps = 38/313 (12%)

Query: 19  SVAQKVRL--VSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQY----AKNLDADIVF 70
           S ++ V +   ++N+          +  W      + ++  L+          L    + 
Sbjct: 574 SYSRPVTVWTGTFNVNGRHEGPDGDLKAWLFPECDSQAEDPLIYAVGFQEIVTLSPQQIM 633

Query: 71  LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSY 128
             +  +  A              S      +    S   + +A+ +  R+  +  ++   
Sbjct: 634 STDPTTRKAWEIAVHTCLNKRADSK-GTPKYVLLRSGQLVGSALMIYAREDALSDIKNVE 692

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188
             +        AGN+    +  E +  ++  +  HL +        N             
Sbjct: 693 GNVKKTGLSGMAGNKGGCAIRFEYSNTRLCFVTAHLAAGFANYDERNRDYE------TIL 746

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYL----------------GNNDDFWKTIDPND 232
           + L+    +  E     +  GDFN +I                    +ND     +    
Sbjct: 747 RGLRFLRNRSIEDHDAVIWLGDFNYRIGLSNQKARELVQQQDFQTLYDNDQLNLQMVAGR 806

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGK 290
           +   + +   S     K        D     +      +  +  +      + +  S   
Sbjct: 807 AFQFYTEGPISFPPTYKYNIGSNDYD---TSEKARIPAWCDRILWRGTNLRQINYGSADL 863

Query: 291 RLSDHCPISIDYD 303
           R+SDH P+   + 
Sbjct: 864 RISDHRPVWAMFT 876


>gi|301766460|ref|XP_002918646.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1-like
           [Ailuropoda melanoleuca]
          Length = 909

 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 76/304 (25%), Gaps = 47/304 (15%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-SYNAVAK 82
           + +WN+N  S    +  W N                     DI  +  QE+  S  A   
Sbjct: 253 VGTWNVNGQSPDSELEPWLNCDSNP---------------PDIYCIGFQELDLSTEAFFY 297

Query: 83  V--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLLGAKDS 136
                +  W +            +         + +    RK   R ++           
Sbjct: 298 FESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQWRYIRDVAAETVGTGI 357

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
             + GN+  V +    +     +++ HL +        N                +    
Sbjct: 358 MGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICSRMSFVVPNQTLPQ 417

Query: 197 QKKESLVPFVIAGDFNRKINYLGNN--------DDFWKTID------PNDSLIRFPKEKD 242
                    +  GD N ++     N        +D  + +              F    +
Sbjct: 418 LNIMKHDVVIWLGDLNYRLCMPDANEVKSLINKNDLQRLLKFDQLNIQRTQKKAFADFTE 477

Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL------SDHC 296
                    +     D +    ++ K  +      IL+   ++     R       SDH 
Sbjct: 478 GEIKFIPTYKYDSKTDRW---DSSGKCRVPAWCDRILWRGTNVNQLHYRSHMELKTSDHK 534

Query: 297 PISI 300
           P+S 
Sbjct: 535 PVSA 538


>gi|296191685|ref|XP_002743730.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase A
           isoform 2 [Callithrix jacchus]
          Length = 892

 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 79/317 (24%), Gaps = 51/317 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +      SD   +           + LQE+ S     + 
Sbjct: 311 ITVVTWNVGTAMPPDDVTSLLHLGGGDDSDGADMIA---------IGLQEVNSMINKRLK 361

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKDSFS 138
                + W   +       +    S+  +   I +   +  ++  L+             
Sbjct: 362 DALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQTDCTRTGLGG 421

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + +   G  +  L+ HL +             +   +    Q  +    Q 
Sbjct: 422 YWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQQFQGPGAQG 477

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 478 ILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKSTWPILKGFQEGP 537

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFVMD----QNAYKFLIQESFSEILYNEDDI 285
                  + D   N        R     D  +              +ES    +      
Sbjct: 538 LNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKPPGGGPSPSGRESHRLQVTQHSYR 597

Query: 286 KSRGKRLSDHCPISIDY 302
                 +SDH P++  +
Sbjct: 598 SHMEYTVSDHKPVAAQF 614


>gi|229522185|ref|ZP_04411602.1| hypothetical protein VIF_002730 [Vibrio cholerae TM 11079-80]
 gi|229341110|gb|EEO06115.1| hypothetical protein VIF_002730 [Vibrio cholerae TM 11079-80]
          Length = 281

 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 84/282 (29%), Gaps = 64/282 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ L+ WNI           +K +    ++  T L +     D  ++ LQE     A  
Sbjct: 59  GELNLLVWNI-----------YKQNRANWSTQLTELSR-----DQQLLLLQEANMTPAFK 102

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +  W            ++          +    K +  +  +Y  L          
Sbjct: 103 EWIHQLGWD--------GTQARAFEAFGETAGVINLAKVMPTMACAYTQLEP----WLRL 150

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            + A+     + +G+++ V+++H  +F +                   Q L   + + ++
Sbjct: 151 PKSAIYARYRLSDGQELVVVNLHAVNFTYGTQEYR-------------QQLTALLDELRD 197

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++AGDFN          +    +          +E     +      N +P+D+ 
Sbjct: 198 FTGPVIVAGDFNSW-------SEARMALLSTQLASVGLQEVRFSPDNRTTFINGLPLDHV 250

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +                        SDH P+ + +
Sbjct: 251 FYRGLQLEKAEAPI---------------SDASDHNPLLVRF 277


>gi|330964254|gb|EGH64514.1| exodeoxyribonuclease III [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 259

 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/265 (10%), Positives = 64/265 (24%), Gaps = 45/265 (16%)

Query: 57  LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116
           L  + +  +AD++ LQ     +  A  F  +          L  +            +A+
Sbjct: 19  LLSWLQAQNADVICLQ-----DTRASAFELDDPAFQLDGYFLYAYEAEVPAQG---GVAL 70

Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176
             +       S       D + R          ++ +  K+ +  +   S    D   N 
Sbjct: 71  YSRLQPKAVISGLGFETADRYGRY---------LQADFDKVSIATLLFPSGMNGDEDLNQ 121

Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------RKINYLGNNDDFWKT 227
                    +     +    +       +V     +                      + 
Sbjct: 122 KFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDEI 181

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQNAYKFLIQESFSEIL 279
           +     +    +        +    N            DY ++     +F+         
Sbjct: 182 VGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA------ 235

Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304
                   R  R S H P+ +DYD+
Sbjct: 236 -----RLPRQPRFSQHAPLIVDYDW 255


>gi|109900436|ref|YP_663691.1| hypothetical protein Patl_4138 [Pseudoalteromonas atlantica T6c]
 gi|109702717|gb|ABG42637.1| conserved hypothetical protein [Pseudoalteromonas atlantica T6c]
          Length = 325

 Score = 47.6 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/263 (8%), Positives = 69/263 (26%), Gaps = 31/263 (11%)

Query: 41  SLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99
            +  ++  + +           N D   ++ L +    + +  +     W    S     
Sbjct: 90  PMNDSADPKRSIKIINSNVLMTNHDAPKLLKLVDQEKPHILVTLETNQWWQDALSPLHDD 149

Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159
              + +   +    + V  +      +              G      +    +G+KI  
Sbjct: 150 YPYRVNFPLENLYGMHVFSRLPLSDIK-------TAERVEKGVPSVHCIATLESGEKIRC 202

Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
             +         +     +     L   A+ +        E+ +P +++GD N       
Sbjct: 203 HFV--HPAPPSPTENEEATERDRELLGLAKEIA---NTDSENALPVIVSGDLNDVAWSPT 257

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                   +  +                 +++  + P+D+    ++              
Sbjct: 258 ----TQAFLRVSGMCDPRIGRGAFNTFHAQHVLARWPLDHVFHSED-------------- 299

Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302
           +   ++    +  SDH P+  + 
Sbjct: 300 FELVNLSRLPEIGSDHFPLLTEL 322


>gi|254228960|ref|ZP_04922382.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25]
 gi|151938637|gb|EDN57473.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25]
          Length = 315

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 77/305 (25%), Gaps = 67/305 (21%)

Query: 5   YVLALVFFLVPCTASV-----AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59
           +V  L   L+  +        +  + ++ +N+   +                 D      
Sbjct: 66  FVAILFVSLLVPSQRSHVVSCSHSLSVIQFNLFYENS----------------DINQFIN 109

Query: 60  YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
           Y     AD+V +QE+            + +  +Y  +R   +            + +  +
Sbjct: 110 YLLRHPADLVVMQELTPRVGSLLHMLDDVYPHYYGGQRDAGYPSN---------LMILSR 160

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
           +       Y     ++            + +      I +   H  S             
Sbjct: 161 HPITEVSVYRAPNGQE--------VIRAVWLPKGQAPITLFAAHPPSPRT---------- 202

Query: 180 SCSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             S L  Q   L   I            ++ GDFN            + T+ P+      
Sbjct: 203 --SELWHQRNALVRTIEMLTALYPEPEVLVVGDFNLSSVSPR-----FATLFPSFQTAPV 255

Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                +    N      I ID+  +     + +I               S   + SDH  
Sbjct: 256 TSWPTNIKGINVPEPMMIGIDHLWLKSEQGQRIICS----------RESSALPQGSDHRM 305

Query: 298 ISIDY 302
           ++   
Sbjct: 306 VTTQI 310


>gi|147779484|emb|CAN67711.1| hypothetical protein VITISV_020427 [Vitis vinifera]
          Length = 843

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 22/131 (16%)

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------FWKTIDP 230
           S        + L           VP+ + GDFN  +     +           F + +D 
Sbjct: 301 SREERDCLWEELGAIRGLW---DVPWCLGGDFNITLFQGERSRQGRTTGAMRRFAQMVDE 357

Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
            +      +      N  +  ++   +D F++ QN              ++        +
Sbjct: 358 FELTDLPLQGGRCTWNGGRGSQSWARLDRFLVTQN----------WLDHFSGVVQSRLPR 407

Query: 291 RLSDHCPISID 301
             SDH PI ++
Sbjct: 408 PTSDHFPILLE 418


>gi|66357202|ref|XP_625779.1| Ccr4p. RNAse [Cryptosporidium parvum Iowa II]
 gi|46226928|gb|EAK87894.1| Ccr4p. RNAse [Cryptosporidium parvum Iowa II]
          Length = 689

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 69/210 (32%), Gaps = 18/210 (8%)

Query: 22  QKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            ++++V++NI +        +  E  +        +    +LL +   +L+ADI+ LQE+
Sbjct: 295 NRLKIVTFNILSEICAQTDKALNEMYTSCPQYALHSNYRRSLLARELIDLNADIIGLQEV 354

Query: 75  GS---YNAVAKVFPKNTWCIFYSTERLINHSKR--------DSNNDIHTAIAVRKKNVRV 123
            S    + +  +     +   ++++     +          +S+  +   + +      V
Sbjct: 355 QSCLYESFIHILMEFKGYSGVFNSDYASVTTFYKRELFNLLESDTILFKKMLINDYPEIV 414

Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183
            +         +            +++E     +  +  +   +            +  L
Sbjct: 415 KEIKVKWPNFIEYLLDKILTVFQIVVLEHKITNVIYVFANTHFYYHPFGGHVRILQAKLL 474

Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNR 213
           +    ++LK          V   + GDFN 
Sbjct: 475 MDLIEKYLKRLRLSFPSKEVFTFLFGDFNT 504


>gi|330972204|gb|EGH72270.1| exodeoxyribonuclease III [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 259

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/274 (9%), Positives = 70/274 (25%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEAEVPAQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       S       D + R          ++ +  K+ +  +   S    D   
Sbjct: 69  ALYSRLQPKAVISGLGFETADRYGRY---------LQADFDKVSIATLLFPSGMNGD--- 116

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF----------------NRKINYL 218
                  +   +       ++ +++     ++  G                         
Sbjct: 117 ----EDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLA 172

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQNAYKFL 270
                  + +     +    +        +    N            DY ++     +F+
Sbjct: 173 PERAWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RSA-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|282866464|ref|ZP_06275508.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
 gi|282558676|gb|EFB64234.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
          Length = 334

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/293 (8%), Positives = 67/293 (22%), Gaps = 77/293 (26%)

Query: 16  CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75
                + ++R+ + N +                    D   L    +    D++ +++  
Sbjct: 108 YVPPGSVQLRVATVNTDG----------------GRVDPHALVDLVRTGRIDVLAVEQTP 151

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135
           S  + A                 +               ++  ++      +  +  A  
Sbjct: 152 SRGSDAL------------DRAGLGALMPYRELHPEYDSSIYSRHPLSHAGTTRIDTAWP 199

Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195
             +           V + G+++ ++ +H                + + L+          
Sbjct: 200 QTT---------AQVTVGGRRVELVAVHTYYPLGDPKRWTRDMAALTSLAG--------- 241

Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251
                S    V  GDFN  +++          +           +   R  A        
Sbjct: 242 ----RSGPDTVFLGDFNASLDHTPMRRLLAAGLTD-------THDALGRGWARTWPVGHA 290

Query: 252 --RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                I +D+ +         +                R    +DH  +    
Sbjct: 291 LVPPLIQLDHVLYGSGLTGVSVA--------------ERTLPGTDHRAVVAVL 329


>gi|116194258|ref|XP_001222941.1| hypothetical protein CHGG_03727 [Chaetomium globosum CBS 148.51]
 gi|88179640|gb|EAQ87108.1| hypothetical protein CHGG_03727 [Chaetomium globosum CBS 148.51]
          Length = 1425

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 72/259 (27%), Gaps = 49/259 (18%)

Query: 55  TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
             L       DA ++ +QE  +     ++         +   ++I  + ++    I + +
Sbjct: 328 DSLMNDVAIQDAAVIAIQEPQARRIQGRLLTTPMEH--HKWTKMIPCTLKEGRWAIRSML 385

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
            V  K V   Q +                     ++ +  + + V  +++          
Sbjct: 386 WVN-KIVEAEQVAVDSPD------------ITAAVIRLPERVVLVASVYVPCGDG----- 427

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------RKINYLGNNDDF 224
                +     +  + +     +   + V  V+AGDFN                G  D  
Sbjct: 428 ----EALKDTCENLRRVVAKAKRGVGTTVDIVVAGDFNCHDQMWGGDDVSSVRQGEADPI 483

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284
              ++        P+         +       ID  +  +   + +I+            
Sbjct: 484 IDLMNELTLSTLLPRGTI----TWQAGGYGSTIDLVLASEELAEAVIRCGVH-------- 531

Query: 285 IKSRGKRLSDHCPISIDYD 303
              R +  SDH  I   +D
Sbjct: 532 ---RTEHGSDHRAIETVFD 547


>gi|50550023|ref|XP_502484.1| YALI0D06413p [Yarrowia lipolytica]
 gi|49648352|emb|CAG80672.1| YALI0D06413p [Yarrowia lipolytica]
          Length = 1061

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/325 (11%), Positives = 92/325 (28%), Gaps = 58/325 (17%)

Query: 19  SVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQEM 74
           S    +++   ++N+N       ++ W    K              +    IV    QE+
Sbjct: 584 SSTTNIKVFAGTFNLNGELSDADLAGWFFPPKSAKELSGGAGFDVHDDLPSIVLVGFQEI 643

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQ 126
                   +        F+        + RD    + +         + VRK  V  ++ 
Sbjct: 644 VQLTPGQILNADPGKKEFWEKRVEAVLNTRDEYVLLRSHQLVGTALLLFVRKAEVGFVKN 703

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186
               +        AGN+  V +       +   +  HL +        +    + +   +
Sbjct: 704 IEGAIKKTGLGGMAGNKGGVAVSFSYANTRFCFITAHLAAGTSNIEERHHDFKTLNTGLR 763

Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDP 230
            ++ L        +     +  GDFN +I+  G                 +D   + +  
Sbjct: 764 FSRGL------TIKDHDCVIWLGDFNYRIDMDGDVVRQIVAKKEYGLLFEHDQLNRQMVL 817

Query: 231 NDSLIRF------------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278
            ++   +                 +  + ++  R     D  +      + +     S++
Sbjct: 818 GETFPYYNEMEINFPPTYKFDNGTATYDTSEKFRTPSWTDRVLYKGTGLRGINYGCVSDL 877

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
           L+            SDH P+  +++
Sbjct: 878 LF------------SDHRPVYAEFN 890


>gi|229043947|ref|ZP_04191641.1| hypothetical protein bcere0027_19890 [Bacillus cereus AH676]
 gi|229144804|ref|ZP_04273201.1| hypothetical protein bcere0012_19640 [Bacillus cereus BDRD-ST24]
 gi|296502778|ref|YP_003664478.1| hypothetical protein BMB171_C1945 [Bacillus thuringiensis BMB171]
 gi|228638526|gb|EEK94959.1| hypothetical protein bcere0012_19640 [Bacillus cereus BDRD-ST24]
 gi|228725387|gb|EEL76650.1| hypothetical protein bcere0027_19890 [Bacillus cereus AH676]
 gi|296323830|gb|ADH06758.1| hypothetical protein BMB171_C1945 [Bacillus thuringiensis BMB171]
          Length = 151

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 11/134 (8%)

Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238
            S     +Q   + +WIT K       ++ GDFN     + +     K            
Sbjct: 19  KSNRKRQEQMNAVNNWITNKVSDYE--LLCGDFNDDPYSMVHQYLIRKHWIDVAQFKEIE 76

Query: 239 KE--KDSRCNANKNLRNKI------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290
           +        +  KN   K         D+ ++ +NA         +  ++ +  + S G 
Sbjct: 77  ENMIAQPTLDYRKNPNLKGDVKQEKRYDWVMIQENAAFEF-PTIENVSIFGDSVLTSTGV 135

Query: 291 RLSDHCPISIDYDF 304
             SDH  + ++  F
Sbjct: 136 FPSDHYSVFVELKF 149


>gi|209550358|ref|YP_002282275.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536114|gb|ACI56049.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 310

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 74/303 (24%), Gaps = 75/303 (24%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M+R++V            S     +L+S+NI   +   G                 +   
Sbjct: 78  MMREFV------EPAVDQSRPALFKLMSFNIENDNFANGAD---------------IAAM 116

Query: 61  AKNLDADIVFLQEMGS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                AD+V + E     + + ++     + I                        V  K
Sbjct: 117 VIASGADVVSILEAEPLLSELPRLLKTYPYYI------------GCGVGMQECDTLVLSK 164

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
              +  +         +       R     ++ +G+K+  L  HL    +          
Sbjct: 165 RPLIEPR-------IRNLGLLWRNRLTISTIDFDGQKVNFLAAHLTKPYYD--------- 208

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                  + + L D I        P V+AGDFN  I                        
Sbjct: 209 --EFHGLEIEDLADIIPSLPG---PLVLAGDFNTSILAPDVQYLMRSQ-------GLGTV 256

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             +            IPID+           +              +      S+H  + 
Sbjct: 257 SLEPATWPIAAGAFGIPIDHVFSRAPLRLKSV-------------RRIENSFGSNHFGLM 303

Query: 300 IDY 302
            ++
Sbjct: 304 AEF 306


>gi|170589429|ref|XP_001899476.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
 gi|158593689|gb|EDP32284.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
          Length = 410

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/320 (11%), Positives = 76/320 (23%), Gaps = 74/320 (23%)

Query: 22  QKVRLV--SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA----DIVFL--QE 73
             V ++  +WN+                 R+ +  + + +   N       D++ L  QE
Sbjct: 111 GTVTVMCLTWNV---------------ASRSQNHLSKIGKLITNERPADRADLICLCFQE 155

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLG 132
           + S NA        +     +   LI    R         + +R+  V       +  + 
Sbjct: 156 LPSINAYYHQETVKSLAEVVADTHLIFCWVR--KWSQMVIVFIREPLVAYTSTPEWQFIS 213

Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192
                     + A+ +   I    +  +  H+     L+ + +      SL         
Sbjct: 214 CSPIVKPVRTKGAIAVFFRIFQASVIFVTCHMTHGPVLNRICDYSKICDSLRF------S 267

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDF---------------------------- 224
                  +        GD N ++      D                              
Sbjct: 268 ALPCSGVKQADCVFWFGDLNFRLQSRERIDALDSQNKKQQNMADSFFDQLLIDDELTLER 327

Query: 225 -----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279
                ++             +     N   N R     D  +          +ES     
Sbjct: 328 CKGNIFEGFSEAYIKFPPTHKFILGTNNYVNDRIPSYTDRILY-------YAKESSRIRP 380

Query: 280 YNEDDIKSRGKRLSDHCPIS 299
              D +       SDH P+ 
Sbjct: 381 AKYDCLWEEN--ASDHKPVY 398


>gi|152968799|ref|YP_001333908.1| hypothetical protein KPN_00224 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150953648|gb|ABR75678.1| hypothetical protein KPN_00224 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 258

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 83/289 (28%), Gaps = 71/289 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
           S  +K+R++ WNI                K+  +++  + +     DA +V LQE  +  
Sbjct: 32  SSDEKIRVLVWNIF---------------KQQRAEWQSVLKNFGK-DAHLVLLQEAQTTP 75

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +    N                  ++      +      V  L  ++P+        
Sbjct: 76  ELVRFATSN---------------YLAADQVPALVLPQHPSGVMTLASAHPIYCCPLRER 120

Query: 139 RAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
               R     LV      + + + V++IH  +F     + +             + L   
Sbjct: 121 EPILRLPKSALVTVYPLPDARLLMVVNIHAVNFSLGVDVYS-------------KQLLPI 167

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             Q      P ++AGDFN         +  ++             +   R          
Sbjct: 168 GDQIAHHSGPVIMAGDFNAW--SRPRMNALYRFAREMSLREVRFSDDQRR------RAFG 219

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
            P+D+                     +  D      R SDH P+ +++ 
Sbjct: 220 RPLDFVFYRG---------------LSVHDASVLVTRASDHNPLLVEFS 253


>gi|126724484|ref|ZP_01740327.1| hypothetical protein RB2150_11651 [Rhodobacterales bacterium
           HTCC2150]
 gi|126705648|gb|EBA04738.1| hypothetical protein RB2150_11651 [Rhodobacterales bacterium
           HTCC2150]
          Length = 358

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/362 (9%), Positives = 90/362 (24%), Gaps = 75/362 (20%)

Query: 12  FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71
             V  TA+ A+ +R+ ++    L+ +    L  + +K   +    +       + D++ L
Sbjct: 2   LAVFATATHAEPIRIATYK-AALTRKGPGLLLSDILKGRDAQIQTVIDVIVAANVDVLVL 60

Query: 72  -------QEMGSYNAVAKVF-PKNTWCIFYSTERLINHSKRDSNNDIHT----------- 112
                  Q +        +      +   +S             N               
Sbjct: 61  TDFDYDAQSVALREFANALAEHGAAYPFHFSRSPNTGMPTGLDFNKNGHLGEPQDAQGFG 120

Query: 113 ------AIAVRKKNVR---------VLQQSYPLLGAKDSFSRAGNRRAVELLVEI----- 152
                  +AV  +            +L   +P         +      +   + +     
Sbjct: 121 WFQGQGGVAVLSRLPFGDGFRDFSDILWADFPQADLPILHDQPYYSPTILRTLRLASTVL 180

Query: 153 --------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204
                   + ++I +L  +  +  F    +     +   +     +L             
Sbjct: 181 WQLPLQLSDQRQIDLLIFYATTPVFDGPEDRNGKRNAHQMRFWVHFLNGKYGPFSSE--- 237

Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------------------- 245
           F + GD N   N    ++   + I  +  +    +  D                      
Sbjct: 238 FALIGDANLDPNDGAGHNYVMRQILDHPMVNDPKQTSDGGGTATQTDANANHETPNAQDT 297

Query: 246 --NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--KRLSDHCPISID 301
              +N N    + +DY +        +    F        +   +      S H  + +D
Sbjct: 298 AQWSNPNGPGNLRVDYVLPSTRLKV-VGSGVFWPSDDRPLNGIDQETVVAASSHRLVWVD 356

Query: 302 YD 303
            +
Sbjct: 357 VE 358


>gi|73967349|ref|XP_537766.2| PREDICTED: similar to skeletal muscle and kidney enriched inositol
           phosphatase isoform 1 [Canis familiaris]
          Length = 624

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 92/330 (27%), Gaps = 58/330 (17%)

Query: 16  CTASVAQKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
            T    +++   +V+WN+ + +    +           SD   L +   NLD  ++ LQE
Sbjct: 181 PTEPRGKRLSIQVVTWNVASAAPPLDL-----------SDLLQLNKDNLNLDMYVIGLQE 229

Query: 74  MGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQS 127
           M     + ++    ++ W  F+          + S+  +        A       V   S
Sbjct: 230 MNCGIMSLLSDTAFEDPWSSFFMDVLSPLSFVKVSSVRMQGLLLLFFAKHHHLPFVQILS 289

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                    F   GN+  V + +++ G  I +++ HL          N           +
Sbjct: 290 TK-STPTGLFGYWGNKGGVNICMKLYGYYISIINCHLPPHMAN----NDQRLEHFDRILE 344

Query: 188 AQWLKDWITQKKESLVPFVIAGDFN--------------------------RKINYLGNN 221
            Q  ++            +  GD N                           +++    +
Sbjct: 345 MQNFEEQDIPNILDHDLILWFGDMNFRIEDFGLHFVRESIKNGCYSDLWEKDQLSIAKRH 404

Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEI 278
           D   +       L     + D   N        R     D  +            +    
Sbjct: 405 DPLLRQFQEGPLLFPPTYKFDKNSNNYDTSEKKRKPAWTDRILWRLKRQPQANPHNQRLP 464

Query: 279 LYN-----EDDIKSRGKRLSDHCPISIDYD 303
           + +        +      +SDH P++  +D
Sbjct: 465 VPHFCLSLRSYVSHMMYCISDHKPVTSTFD 494


>gi|326626617|gb|EGE32960.1| Protein YafD [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 266

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 91/303 (30%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 25  FASIGQALPAGEPLSSEERIRILVWNIF--------------KQQRAEWLSVLKNYGK-- 68

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 69  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V+++H  +F     + +     
Sbjct: 114 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYS----- 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P +IAGDFN         +  ++             +
Sbjct: 169 --------KQLLPIGDQIAHHSGPVIIAGDFNAW--SRPRMNVLYRFAREMSLRQVRFTD 218

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              R           P+D+                     N ++      R SDH P+ +
Sbjct: 219 DQRR------RAFGRPLDFVFYRG---------------LNVNEASVLVTRASDHNPLLV 257

Query: 301 DYD 303
           ++ 
Sbjct: 258 EFS 260


>gi|296101374|ref|YP_003611520.1| hypothetical protein ECL_01008 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295055833|gb|ADF60571.1| hypothetical protein ECL_01008 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 265

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 89/305 (29%), Gaps = 77/305 (25%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +K+R++ WNI                K+  +D+  + +     
Sbjct: 25  FASISQALPAGTPLSSDEKIRVLVWNIF---------------KQQRADWLSVLKNFGK- 68

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 69  DAHLVLLQEAQTTPELVRFATTN---------------YLAADQVPAFVLPQHPSGVMTL 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V++IH  +F     + +     
Sbjct: 114 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYS----- 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR--KINYLGNNDDFWKTIDPNDSLIRFP 238
                   + L     Q      P ++AGDFN   +           +            
Sbjct: 169 --------KQLLPIGDQIAHHSGPIIMAGDFNAWSRPRMNALYRFAREMSLREVRFSDDQ 220

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           ++K              P+D+                     +  D      R SDH P+
Sbjct: 221 RKKA----------FGRPLDFVFYRG---------------LSVHDASVLVTRASDHNPL 255

Query: 299 SIDYD 303
            +++ 
Sbjct: 256 LVEFS 260


>gi|152964095|ref|YP_001359879.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
 gi|151358612|gb|ABS01615.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
          Length = 245

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/280 (11%), Positives = 75/280 (26%), Gaps = 60/280 (21%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
            + +R +S+N++                R T +   L       + D + LQE  +    
Sbjct: 6   GRALRTISYNLH--------------EGRATVELAALA---SAHEVDALCLQECDTRRLP 48

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
             V                      +       +A+  +  R+    + L   + S    
Sbjct: 49  ETV---------------GPLVLAGATQRNRLGLALYYRPERLHAHGHELRPLRRSMHDR 93

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
               A E L+ +  + +      L       +  +  +   ++   Q       I     
Sbjct: 94  FLSPAHERLLAVRFEDLHDDGALLTLASIHTAPLSATN---AMRRHQITEALGAIRA-AA 149

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
                ++ GDFN             + +          +   S        R +   D+ 
Sbjct: 150 HGSSALVVGDFNYPWFASS----LTRRLSDQGF-----QVSHSDLPTYVRKRFRGHFDFA 200

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
            + +                + + +++  +  SDH P+ +
Sbjct: 201 -ISEGM--------------DIESVRTLEQAGSDHLPVLV 225


>gi|288803541|ref|ZP_06408972.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica D18]
 gi|288333964|gb|EFC72408.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica D18]
          Length = 116

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/90 (8%), Positives = 24/90 (26%), Gaps = 5/90 (5%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           Q++ + ++NI   +  +            T   + L  +      +I   QE+       
Sbjct: 20  QRLYVGTYNIRYNNPNDEKEGNA-----WTQRCSHLCDFINFEQPEIFGTQEVLVDQLHD 74

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            +   +++                +     
Sbjct: 75  LMKGLDSYGYIGVGRDDGKEKGEYAAIFYK 104


>gi|254389388|ref|ZP_05004616.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197703103|gb|EDY48915.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 343

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/342 (9%), Positives = 72/342 (21%), Gaps = 86/342 (25%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K++++ +NI                 R       +      ++ D+V L E         
Sbjct: 21  KLKVMQFNIWLGGS------------RVPGGRAGIADTIAAVEPDVVMLSESNPERVAHL 68

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
           +                       +N      AV  +   +   S+P             
Sbjct: 69  LADLAE------------RGLTYFDNKNPVDPAVISRYPIIEHASFPYWSKAVVSVDGTE 116

Query: 143 RRAVELLVEI------------NGKKIWVLDIHLKSFCFLDSLENT-----YSPSCSLLS 185
             A    +E              G    +                         + S  +
Sbjct: 117 VAAYSGHLEYRYYVNYLPRGYGGGTPSPLETSEYGWGEIPTGPITDTGLITRLNAASGRT 176

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--------------FWKTIDPN 231
           +  + +     +++      ++AGDFN   +   N+                  K I+  
Sbjct: 177 KVTRTVLADAAEERAKGRLTLLAGDFNEPSHRDWNHRTRNLFDHNGTVVTWSTTKAIEDA 236

Query: 232 DSLIRFPKEKDSR------CNANKNLR-------------NKIPIDYFVMDQNAYKFLIQ 272
                +                + N                +  ID+     +    L+ 
Sbjct: 237 GFRDSYRVIHPDPVRRPGFTWPSDNPGADVSQLTWAPKADERDRIDFVFYHPDRRIHLLD 296

Query: 273 ESF------------SEILYNEDDIKSRGKRLSDHCPISIDY 302
                           E    +   +      +DH  +   +
Sbjct: 297 SVIVGPSSTIVRNQRVEESGRDRFWEPTWTWPTDHKAVLSTF 338


>gi|51013817|gb|AAT93202.1| YBL019W [Saccharomyces cerevisiae]
          Length = 520

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/368 (8%), Positives = 74/368 (20%), Gaps = 102/368 (27%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
               +R +++N+N +        +             LR       ADI+  QE+ +   
Sbjct: 13  SEDTIRFLTFNVNGIRTFFHYQPFSQMN-------QSLRSVFDFFRADIITFQELKTEKL 65

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---------------------TAIAV-- 116
               + +      + +              I                      T      
Sbjct: 66  SISKWGRVDGFYSFISIPQTRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIK 125

Query: 117 ---RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
                        +  + G          + A+EL  E     + +    +    +  + 
Sbjct: 126 NGKHSAISYRNDVNQGIGGYDSLDPDLDEKSALELDSEGRCVMVELACGIVIISVYCPAN 185

Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------- 216
            N+         +  + L   +    +     V+ GD N   +                 
Sbjct: 186 SNSSEEGEMFRLRFLKVLLRRVRNLDKIGKKIVLMGDVNVCRDLIDSADTLEQFSIPITD 245

Query: 217 ----------------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRC--------- 245
                                    +   F + +  +       +               
Sbjct: 246 PMGGTKLEAQYRDKAIQFIINPDTPHRRIFNQILADSLLPDASKRGILIDTTRLIQTRNR 305

Query: 246 -NANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295
                                ID+ ++     + +                      SDH
Sbjct: 306 LKMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKAADIL-----------PDILGSDH 354

Query: 296 CPISIDYD 303
           CP+  D D
Sbjct: 355 CPVYSDLD 362


>gi|73946177|ref|XP_541169.2| PREDICTED: similar to synaptojanin 2 [Canis familiaris]
          Length = 1467

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 87/337 (25%), Gaps = 66/337 (19%)

Query: 24  VRLVS--WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD------IVFLQEMG 75
           +R+ +  WN+N   +     L    +     D         + D D       V  +EM 
Sbjct: 515 IRIATGTWNVNGGKQFRSNLLGTAELADWLLDSPTRSGLPGSQDEDSPADIFAVGFEEMV 574

Query: 76  SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--------IAVRKKNVRVLQQS 127
             +A   V    T    +  +     S+      + +A        I VR  +V  ++  
Sbjct: 575 ELSAGNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDV 634

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
                      +AGN+ AV +  + +      +  HL +        N      +     
Sbjct: 635 AIDTVKTGMGGKAGNKGAVGIRFQFHSSSFCFVCSHLTAGQSQVKERNEDYREIT----- 689

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIR----- 236
            Q L   + +   S       GDFN +I+              WK +   D L       
Sbjct: 690 -QKLSFPMGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSG 748

Query: 237 --FPKEKDSRCNANKNLRN---------------KIPIDYF-VMDQNAYKFLIQESFSEI 278
             F    +   N     +                    D      +        E  + +
Sbjct: 749 KIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKRHSFDRTAEELNLL 808

Query: 279 LYNED---------------DIKSRGKRLSDHCPISI 300
             + D                      + SDH P+  
Sbjct: 809 DNDVDADNTVRHCWSPGVLKYYGRAELQASDHRPVLA 845


>gi|134112357|ref|XP_775154.1| hypothetical protein CNBE4270 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50257806|gb|EAL20507.1| hypothetical protein CNBE4270 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1312

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/338 (15%), Positives = 99/338 (29%), Gaps = 72/338 (21%)

Query: 26   LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIV--FLQEM-----GSY 77
            + +WNI         S     +  + ++   L    +++D  DI+    QE+       Y
Sbjct: 946  ICTWNI--------DSAKPTDLNGSVANAHFLEDVLRSVDSPDIIVFGFQEVIPLTDKKY 997

Query: 78   NAVAKVFPKNTWCIFYSTERLINHSKRD------------------------SNNDIHTA 113
             A   +F   +     + +R+ +  +                          S   + T 
Sbjct: 998  TAKTLLFGNKSKDGGAAADRVSHAYRHWLEKLQSAVKMASPSNCPYVKIHSESLVGLFTC 1057

Query: 114  IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
            I V++     L+        +      GN+ A+   + ++   I  +++HL +     + 
Sbjct: 1058 IFVKQSEKNFLRDLDITTVKRGIGGIYGNKGAIVSRLVMDDTSICFINVHLAAGQSQKAS 1117

Query: 174  ENTYSP---SCSLLSQQAQWL---KDWITQKKESLVPFVIAGDFNRKINYLGN------- 220
             N           +   A  L                  + GD N +I+           
Sbjct: 1118 RNADLAGILEDKAIFPPADELPFVHGGCGTGILDHEMVFLNGDLNYRIDQRRENVISSIA 1177

Query: 221  ---------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271
                     +D   K +  N +      E+     A     N    DY     ++ K  I
Sbjct: 1178 NGELAYLLEHDQLRKEMRTNHAFRLRNFEEAPITFAPTYKYNPGTHDY----DSSEKRRI 1233

Query: 272  QESFSEILYNED------DIKSRGKRLSDHCPISIDYD 303
                  ILY +       + +     +SDH P+S  Y 
Sbjct: 1234 PAWCDRILYKKSPRVQALNYQRYEPTVSDHRPVSAGYT 1271


>gi|322701550|gb|EFY93299.1| SacI domain and endonuclease/exonuclease/phosphatase [Metarhizium
           acridum CQMa 102]
          Length = 1335

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/324 (12%), Positives = 91/324 (28%), Gaps = 61/324 (18%)

Query: 19  SVAQKVRL--VSWNINT-------------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63
           + ++ + +   ++N+N                   GV   +  V        L  Q   N
Sbjct: 639 TSSETITIWTGTFNLNGRTDGIGHDLSPWLFGPSPGVEQPEIYVVAFQEIVELSPQQIMN 698

Query: 64  LDADIVFLQE---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            D     L E     + N        + + +  S + +               I V+   
Sbjct: 699 SDPSRKHLWEEAVKRTLNDRQARLGGDRYVLLRSGQLVGA----------ALCIFVKTSV 748

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           ++ ++     +        AGN+ AV +  +    +I  +  HL +        +  +  
Sbjct: 749 LKNIKNVEGSVKKTGLSGMAGNKGAVAIRFDYANTQICFVTAHLAAGFSN---YDERNRD 805

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK----------------INYLGNNDDF 224
            + +      L+    +  E     +  GDFN +                +  L  ND  
Sbjct: 806 YTTIHH---GLRFQRNRGIEDHDAIIWMGDFNYRIGLGLETAKALVKKQDLETLYENDQL 862

Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID-----YFVMDQNAYKFLIQESFSEIL 279
              +    S   + + + +     K        D                ++++  +   
Sbjct: 863 NLQMVAGLSFPFYSEARINFMPTYKFDVGSDTYDSSEKARI---PAWTDRILRKGANLRQ 919

Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303
            + D       + SDH P+   ++
Sbjct: 920 TSYDSAP---LKFSDHRPVYATFE 940


>gi|316997306|dbj|BAJ52756.1| cytolethal distending toxin B [Campylobacter lari]
          Length = 268

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 79/306 (25%), Gaps = 52/306 (16%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           ++K +  +    +   A   +   + +WN+   S         +           +RQ  
Sbjct: 1   MKKILFLVFIINLTFGAL--ENYNVGTWNLQGSSAATESKWNIS-----------IRQLI 47

Query: 62  KNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              +  DI+ +QE G     A + P+    +              + +  +       + 
Sbjct: 48  SGDNPLDILAVQEAGILPTTAVMTPRQVQPVGVGIPIHEYEWNLGTLSRPNNVFIYYSRV 107

Query: 121 VRVLQQSYPLLGAKD--------SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172
                +    + ++               +R  + + +  +        +H  +    D+
Sbjct: 108 DVGANRVNMAIVSRIRADEVIVLPPPTVASRPIIGIRIGND----VFFSVHALARTGNDA 163

Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232
                +      +                 + ++I GDFNR             +I    
Sbjct: 164 GAIVNAVDMHFRNM--------------PQINWMIMGDFNRTPGD-------LVSILDTG 202

Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292
              R               R    IDY V   +    L       IL        R    
Sbjct: 203 VRSRINIVSPPSFTQTSAQR---VIDYAVTGNSDTTRLYNPPA--ILAVLALAGLRTFLA 257

Query: 293 SDHCPI 298
           SDH P+
Sbjct: 258 SDHFPV 263


>gi|312138330|ref|YP_004005666.1| phosphatase [Rhodococcus equi 103S]
 gi|311887669|emb|CBH46981.1| putative secreted phosphatase [Rhodococcus equi 103S]
          Length = 328

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 82/302 (27%), Gaps = 66/302 (21%)

Query: 5   YVLALVFF----LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           ++LA +F      V   ++    VR++  N+                K   +D   L + 
Sbjct: 80  WLLAPLFIPGADGVSPASATGPTVRVMQANV----------------KVGQADPDALVRT 123

Query: 61  AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
            ++ D DI+ +QE+   +  A                ++ H    S         V  + 
Sbjct: 124 VRDRDVDILTVQELTDESIEALERAGLD--------DVLPHRFVVSYGPGGQGGGVYSRF 175

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179
                 + P   + +          +   +++  +  + +L +H             Y  
Sbjct: 176 PLSNTHNLPDFFSVN----------LTADIDVGLREPLTLLAVHPAP---------AYLF 216

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
              L + + + + D +          V++GDFN                      +    
Sbjct: 217 PAQLWAAELRGIHDEMRAFAGRDN-VVVSGDFNASYTQPQYRALLTDGYADAADQLGA-- 273

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  A +       ID  +                      D++      SDH  + 
Sbjct: 274 GLVPTMPAARWYPAVTGIDRVITKGAVAT---------------DLERIDIAGSDHHGLL 318

Query: 300 ID 301
           +D
Sbjct: 319 VD 320


>gi|332293574|ref|YP_004432183.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332171660|gb|AEE20915.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 351

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 68/282 (24%), Gaps = 62/282 (21%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           P      +++ LV+ N+                 +T ++Y       K  +  I    E 
Sbjct: 87  PQAEFHKEQLTLVTANV----------------LQTNTNYDKFITIIKESNPHIFITMES 130

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
                         W    S           +  D    + V  K      +   L+   
Sbjct: 131 DQK-----------WDKEISKAFPEYTHTVKATLDNFYGMHVYSKIPFQSSEIKYLIEED 179

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
                      +   +    +   ++ IH       ++  +    +          L   
Sbjct: 180 IPS--------IHCEIMYADQPFNLIAIHPAPPSPSENETSKERDA---------ELMLV 222

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254
             Q +ES    V+ GD N  +    +    +  I     L                   +
Sbjct: 223 GKQCRESKDATVVCGDLNDVVWSKTSR--LFSKIT--GYLDPRVGRGLYPSFHANYWLLR 278

Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296
            P+D+    ++               +  ++K      SDH 
Sbjct: 279 FPLDHLFYSKDL--------------HVTNMKRLAYFGSDHF 306


>gi|205351589|ref|YP_002225390.1| hypothetical protein SG0256 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205271370|emb|CAR36163.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
          Length = 259

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 91/303 (30%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 18  FASIGQALPAGEPLSSEERIRILVWNIF--------------KQQRAEWLSVLKNYGK-- 61

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 62  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 106

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V+++H  +F     + +     
Sbjct: 107 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNVHAVNFSLGVDVYS----- 161

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P +IAGDFN         +  ++             +
Sbjct: 162 --------KQLLPIGDQIAHHSGPVIIAGDFNAW--SRPRMNVLYRFAREMSLRQVRFTD 211

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
              R           P+D+                     N ++      R SDH P+ +
Sbjct: 212 DQRR------RAFGRPLDFVFYRG---------------LNVNEASVLVTRASDHNPLLV 250

Query: 301 DYD 303
           ++ 
Sbjct: 251 EFS 253


>gi|327304571|ref|XP_003236977.1| endonuclease/exonuclease/phosphatase [Trichophyton rubrum CBS
           118892]
 gi|326459975|gb|EGD85428.1| endonuclease/exonuclease/phosphatase [Trichophyton rubrum CBS
           118892]
          Length = 1163

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 86/318 (27%), Gaps = 64/318 (20%)

Query: 26  LVSWNINT---LSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79
           + ++NIN     + +        S+ +   D T++    Q    L       Q++ S + 
Sbjct: 610 VGTFNINGRREGATEGLGPWLHGSLNQLPEDPTIVAVGFQEIVELSP-----QQIMSTDP 664

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTA----IAVRKKNVRVLQQSYPLLGA 133
             +   ++      +       +       +         + V+K  +  ++     L  
Sbjct: 665 STRKIWEHAVISSLNARTTKRRTTEYVLLRSGQLVGAALLLFVKKDVINKIKNVEGSLKK 724

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                  GN+ AV + ++ +   I  +  HL +        N            A+ L+ 
Sbjct: 725 TGLSGMGGNKGAVAIRLDYSNTSICFITAHLAAGFSNYEERNRD------YHTIARGLRF 778

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNN----------DDFWK--------------TID 229
              +        +  GDFN +I                D  ++                 
Sbjct: 779 QRNRPIVGHDATIWFGDFNYRIGLGNERVRPLIESGDIDALYQHDQLNLQMVAGLAFQYY 838

Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPI----DYFVMDQNAYKFLIQESFSEILYNEDDI 285
               +   P  +        +   K  I    D  +      + L               
Sbjct: 839 MEGPVTFPPTYRYDNGTDEYDTSEKQRIPAWCDRILWRGRILRQLA-------------Y 885

Query: 286 KSRGKRLSDHCPISIDYD 303
           K+   + SDH P+   ++
Sbjct: 886 KTAPLKFSDHRPVYATFE 903


>gi|145515305|ref|XP_001443552.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410941|emb|CAK76155.1| unnamed protein product [Paramecium tetraurelia]
          Length = 883

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 87/326 (26%), Gaps = 61/326 (18%)

Query: 18  ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG 75
           +   + + + +WN+                 +   D         +  ADI  + LQEM 
Sbjct: 550 SFSERTILVATWNV------------GGETVQQQYDLNR---QILDYQADIIVIGLQEMV 594

Query: 76  SYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQS 127
           +         ++        I  +  +   +    S       + +  K      + + S
Sbjct: 595 NSATGLVGGSSQYLKNWDKLIANNLRQRDKYIYIKSKELQGIGLFIYAKERFQDRITKVS 654

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           Y  +      +   N+ AV + + I+   +  ++ +L+                      
Sbjct: 655 YDKIKLSMWGNPFTNKGAVAIKMFIDDTLVCFINCNLEYGEKSLDTRLQNLNDIHQTLFN 714

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN--------------------------- 220
              +     +K E     ++ G+ N +IN   +                           
Sbjct: 715 QTGIGKKKEEKIEQCDYRILLGNLNFRINLEKDKILIVCRKKSDGRSQGNILVYYQFNIR 774

Query: 221 ----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID--YFVMDQNAYKFLIQES 274
                D+     + N  L ++ +   +     K        D        +    ++   
Sbjct: 775 TLKKYDEIKINREENQYLNQYQESDINFLPTYKFDPFSERYDESR---TPSWNDRILVAQ 831

Query: 275 FSEILYNEDDIKSRGKRLSDHCPISI 300
                ++    KS     SDH P+S 
Sbjct: 832 NEHCEHSYQYYKSHNVTYSDHRPVSA 857


>gi|26339034|dbj|BAC33188.1| unnamed protein product [Mus musculus]
 gi|123226360|emb|CAM24771.1| oculocerebrorenal syndrome of Lowe [Mus musculus]
          Length = 727

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 74/309 (23%), Gaps = 47/309 (15%)

Query: 22  QKVR--LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMG-S 76
           Q  R  + +WN+N  S    +  W +                     DI  +  QE+  S
Sbjct: 237 QSFRFFVGTWNVNGQSPDSSLEPWLDCDPNP---------------PDIYCIGFQELDLS 281

Query: 77  YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130
             A        +  W +            R         + +    RK   + ++     
Sbjct: 282 TEAFFYFESVKEQEWSLAVERGLPSKAKYRKVQLVRLVGMMLLIFARKDQCQYIRDVATE 341

Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190
                   + GN+  V +    +     +++ HL +        N            +  
Sbjct: 342 TTGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEEFERRNQDYKDICARMTFSVP 401

Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLG--------NNDDFWKTID------PNDSLIR 236
            +             +  GD N ++            N ++  K +              
Sbjct: 402 NQTVPQVNIMKHDVVIWLGDLNYRLCMPDASEVKSLINKNELHKLLKFDQLNIQRTQKKA 461

Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMD-----QNAYKFLIQESFSEILYNEDDIKSRGKR 291
           F    +   N     +     D +              ++    +              +
Sbjct: 462 FADFNEGEINFVPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGINVNQL--HYRSHMELK 519

Query: 292 LSDHCPISI 300
            SDH P+S 
Sbjct: 520 TSDHKPVSA 528


>gi|156537622|ref|XP_001607774.1| PREDICTED: similar to skeletal muscle/kidney enriched inositol
           5-phosphatase [Nasonia vitripennis]
          Length = 429

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 88/322 (27%), Gaps = 51/322 (15%)

Query: 17  TASVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
             +   +++L  V+WN+         + +           +      +  D  I+ LQE+
Sbjct: 2   ATAAEGRLKLHFVTWNV--------ATKYPEQDLSQLLGLSHFATSKQLADIYIIGLQEV 53

Query: 75  GSYN---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQQSYP 129
            S      +   F       F    + +++ K  +         +   +K++  L+    
Sbjct: 54  KSQPQNIVLDIFFEDPWTKSFREALKDLDYVKLRTQRLQGLVLNVFCLRKHLTHLRTVDT 113

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL-KSFCFLDSLENTYSPSCSLLSQQA 188
                      GN+ AV +   I G  I +++ HL      L      Y+      S   
Sbjct: 114 QYTKTGFGGMWGNKGAVSIRFNIYGVNICMVNAHLTPHDHLLADRIADYNTIIREHSYNV 173

Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE-------- 240
               + +             GD N ++       D    +  N   +   K+        
Sbjct: 174 PDTTNILYH-----DYVFWIGDLNFRLAEGLTGHDIDALVKKNHLDVLLEKDQLKTVMEN 228

Query: 241 ------------KDSRCNAN-------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281
                                         R     D  +  +         S   + Y+
Sbjct: 229 REAFAELTEEKITFPPTYKYEFASQEFDFKRRPSWTDRILY-KVNTDVYEDVSLKAVQYS 287

Query: 282 EDDIKSRGKRLSDHCPISIDYD 303
                S  +  SDH P+S ++D
Sbjct: 288 YKSYPSYVQ--SDHKPVSAEFD 307


>gi|301598678|pdb|3N9V|A Chain A, Crystal Structure Of Inpp5b
 gi|301598679|pdb|3N9V|B Chain B, Crystal Structure Of Inpp5b
          Length = 313

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 73/309 (23%), Gaps = 49/309 (15%)

Query: 31  INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---AVAKVFPKN 87
           I       G         +       L    +  D   V  QE+              + 
Sbjct: 2   IQNFRFFAGTYNVNGQSPKECLRL-WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTPKEE 60

Query: 88  TWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
            W    S     +             I     V++++   + +            R GN+
Sbjct: 61  EWFKAVSEGLHPDAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRMGNK 120

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V +  + +   I V++ HL +        N          Q  Q           +  
Sbjct: 121 GGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTISNHD 180

Query: 204 PFVIAGDFNRKINYLGN-----------------NDDFWKTIDPNDSLIRFPKEKDSRCN 246
             +  GD N +I  L                    D     +        F + + +   
Sbjct: 181 VILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELTFQP 240

Query: 247 ANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
             K              R     D  +           ++ +++ Y          + SD
Sbjct: 241 TYKYDTGSDDWDTSEKCRAPAWCDRILW--------KGKNITQLSYQSH----MALKTSD 288

Query: 295 HCPISIDYD 303
           H P+S  +D
Sbjct: 289 HKPVSSVFD 297


>gi|66043485|ref|YP_233326.1| exodeoxyribonuclease III xth [Pseudomonas syringae pv. syringae
           B728a]
 gi|71737295|ref|YP_272508.1| exodeoxyribonuclease III [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257481758|ref|ZP_05635799.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289625444|ref|ZP_06458398.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646370|ref|ZP_06477713.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298484823|ref|ZP_07002923.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|302189243|ref|ZP_07265916.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. syringae
           642]
 gi|63254192|gb|AAY35288.1| Exodeoxyribonuclease III xth [Pseudomonas syringae pv. syringae
           B728a]
 gi|71557848|gb|AAZ37059.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298160677|gb|EFI01698.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|320322253|gb|EFW78349.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331902|gb|EFW87840.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330866529|gb|EGH01238.1| exodeoxyribonuclease III [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330873178|gb|EGH07327.1| exodeoxyribonuclease III [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330941122|gb|EGH44002.1| exodeoxyribonuclease III [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330952123|gb|EGH52383.1| exodeoxyribonuclease III [Pseudomonas syringae Cit 7]
 gi|330977341|gb|EGH77294.1| exodeoxyribonuclease III [Pseudomonas syringae pv. aptata str. DSM
           50252]
 gi|330986867|gb|EGH84970.1| exodeoxyribonuclease III [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 259

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/274 (9%), Positives = 70/274 (25%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEAEVPAQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       S       D + R          ++ +  K+ +  +   S    D   
Sbjct: 69  ALYSRLQPKAVISGLGFETADRYGRY---------LQADFDKVSIATLLFPSGMNGD--- 116

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF----------------NRKINYL 218
                  +   +       ++ +++     ++  G                         
Sbjct: 117 ----EDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLA 172

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQNAYKFL 270
                  + +     +    +        +    N            DY ++     +F+
Sbjct: 173 PERAWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RSA-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|254570599|ref|XP_002492409.1| Protein involved in 5.8S rRNA processing [Pichia pastoris GS115]
 gi|238032207|emb|CAY70189.1| Protein involved in 5.8S rRNA processing [Pichia pastoris GS115]
 gi|328353577|emb|CCA39975.1| hypothetical protein PP7435_Chr3-1029 [Pichia pastoris CBS 7435]
          Length = 487

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/226 (9%), Positives = 63/226 (27%), Gaps = 12/226 (5%)

Query: 24  VRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           + ++++N+   +              +  +   +L    K  + DI+ LQE+      + 
Sbjct: 89  ISIMTYNMLAQALIRRKLFPTSGDALKWGNRSVVLLNELKYYNCDIMCLQEVDYIQFNSF 148

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFSRA 140
              +     + S                  A+   ++  ++   Q+    +  +      
Sbjct: 149 WNDELGKLGYDSQFYREGTKNHGVVVFWRKALFNCIKVSHINHDQEKTSDIAPRTVAQNV 208

Query: 141 GNRRAVE----LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
           G   A+E    +  +        + I      +        +    L+ ++ +     +T
Sbjct: 209 GVLVALEFSEKIKQKFPFSNRKGILIGTTHLFWHPFGTYERTRQTYLILKKMKEFHMSLT 268

Query: 197 QKKESLVP-----FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237
             ++          + AGD N +           K +  +      
Sbjct: 269 GSEKEDKMNDEWFTLFAGDLNSQPFDAPYLSMTSKPVLYSGRAKTV 314


>gi|66828629|ref|XP_647668.1| RhoGAP domain-containing protein [Dictyostelium discoideum AX4]
 gi|27085409|gb|AAN85440.1| inositol 5-phosphatase 4 [Dictyostelium discoideum]
 gi|60475249|gb|EAL73184.1| RhoGAP domain-containing protein [Dictyostelium discoideum AX4]
          Length = 787

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 81/314 (25%), Gaps = 60/314 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI--VFLQEMGSYNAVAKV 83
           L +WN+N     E +  W      +             L  DI  +  QE+    A A +
Sbjct: 140 LGTWNVNGKKPSESLDPWLKDPSMS-------------LQPDIYAIGFQEL-DLTAEALL 185

Query: 84  FPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137
               T  + +    L                 I   + V+K++   +      + A    
Sbjct: 186 LGDTTRSLPWEQHILNTLQGDYVKLLSKQLVGILLCVYVKKEHKPHIANVQSDIAAVGIM 245

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-DWIT 196
              GN+  V +        I +L+ HL +        N      S   +       D  T
Sbjct: 246 GMMGNKGGVAIRFSFYNTTICILNSHLNAHMDNVLRRNQDMKDISKNIKFINESSTDHST 305

Query: 197 QKKESLVPFVIAGDFNRKINYLGNN----------------DDFWKTIDPNDSLIRFPKE 240
                       GD N +I    N                 D   + +        F + 
Sbjct: 306 INIFDHDQLFWIGDLNYRIPLPDNEVKEKIKKKDFYNLFLVDQLNQQMKAGAVFEGFQEP 365

Query: 241 KDSRCNANKNL------------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
             S     K              R     D  +           E+   + Y   ++ S 
Sbjct: 366 PISFAPTYKYDAGTEEYDSSEKKRTPAWCDRILW----KTHKKAENVGILSYKRAELIS- 420

Query: 289 GKRLSDHCPISIDY 302
               SDH P+S  +
Sbjct: 421 ----SDHRPVSASF 430


>gi|302666957|ref|XP_003025073.1| hypothetical protein TRV_00731 [Trichophyton verrucosum HKI 0517]
 gi|291189155|gb|EFE44462.1| hypothetical protein TRV_00731 [Trichophyton verrucosum HKI 0517]
          Length = 1169

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 86/320 (26%), Gaps = 68/320 (21%)

Query: 26  LVSWNINT---LSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79
           + ++NIN     + +        S+ +   D T++    Q    L       Q++ S + 
Sbjct: 616 VGTFNINGRREGATEGLGPWLHGSLNQLPEDPTIVAVGFQEIVELSP-----QQIMSTDP 670

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTA----IAVRKKNVRVLQQSYPLLGA 133
             +   ++      +       +       +         + V+K  +  ++     L  
Sbjct: 671 STRKIWEHAVISSLNARTTKRKTTEYVLLRSGQLVGAALLLFVKKDVINKIKNVEGSLKK 730

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                  GN+ AV + ++ +   I  +  HL +        N            A+ L+ 
Sbjct: 731 TGLSGMGGNKGAVAIRLDYSNTSICFITAHLAAGFSNYEERNRD------YHTIARGLRF 784

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE------------- 240
              +        +  GDFN +I            I+  D  + +  +             
Sbjct: 785 QRNRPIVGHDATIWFGDFNYRIGLSNER--VRPLIESGDIDVLYQHDQLNLQMVAGLAFQ 842

Query: 241 -------KDSRCNAN------KNLRNKIPI----DYFVMDQNAYKFLIQESFSEILYNED 283
                                 +   K  I    D  +      + L             
Sbjct: 843 YYMEGPVTFPPTYRYDNGTDEYDTSEKQRIPAWCDRILWRGRILRQLA------------ 890

Query: 284 DIKSRGKRLSDHCPISIDYD 303
             K+   + SDH P+   ++
Sbjct: 891 -YKTAPLKFSDHRPVYATFE 909


>gi|157344|gb|AAA28508.1| reverse transcriptase (put.); putative [Drosophila melanogaster]
          Length = 858

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 75/282 (26%), Gaps = 64/282 (22%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
            +R+ +WN N                  +     L Q+      D++ L E    +    
Sbjct: 3   TLRIATWNANG----------------VSQRKLELAQFLHEKHIDVMLLSETHLTS---- 42

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                 +            +  D      TAI +R +      + +     +        
Sbjct: 43  -----KYNFQIRDYHFYGTNHPDGKAHGGTAILIRNRMKHHFYKEFAENHLQ-------- 89

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202
             A  + ++++   +  L        F                        ++   +   
Sbjct: 90  --ATSINIQLDDNTLLTLAAVYCPPRFTVLE------------------AQFLDFFQALG 129

Query: 203 VPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             F+ AGD+N K  + G+   +   K +           +  S  +      +   +   
Sbjct: 130 PHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLNKL--- 186

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
               +   F + ++ S  L   + +       SDH P+ I  
Sbjct: 187 ---PDLIDFAVTKNISRSLVKAECLPDLS---SDHSPVLIHL 222


>gi|46205899|ref|ZP_00210081.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
 gi|46205900|ref|ZP_00210082.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 180

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 60/207 (28%), Gaps = 33/207 (15%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+ + L + N+N +       +                 +  +   D++ LQE+ + ++V
Sbjct: 2   ARVLTLATANVNGIRAAYRRGMD---------------AWIASRTPDVLLLQEVRAPDSV 46

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
                   W + +             +      +AV  +      +     G  +     
Sbjct: 47  VNDL-LEGWHVAHQAC----------DIKGRAGVAVASRLPVSAVRVGLGAGEPEPPVDT 95

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
           G R     L   +G ++ V+  ++ S             +        + +   + +   
Sbjct: 96  G-RWVEADLELPDGGRLTVVSAYIHSGTVSQPETMVAKYA------YLEKVTARLRELAA 148

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKT 227
           +    V+AG+ N     +   +     
Sbjct: 149 TGEKVVLAGELNIAHRNVDIKNWKGNL 175


>gi|256080329|ref|XP_002576434.1| ap endonuclease [Schistosoma mansoni]
 gi|238661702|emb|CAZ32671.1| ap endonuclease, putative [Schistosoma mansoni]
          Length = 254

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 50/216 (23%)

Query: 16  CTASVAQKV------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
            +  +A  +      ++VSWN+N +      +                 +Y K  +ADI 
Sbjct: 51  SSPELANPLSSKWNFKIVSWNVNGIRAVIKNNGM---------------EYIKKENADIF 95

Query: 70  FLQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
            +QE     + +       ++  F+S+     ++            A+  K   +     
Sbjct: 96  CIQETKCPLHKIPSEAKVPSYQSFWSSADKAGYA----------GTALFSKISPIKVT-- 143

Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQ 187
              G          R     ++     K +++  ++ +    L  L            + 
Sbjct: 144 --YGIGKKMHDDEGR-----VITAEYDKFYLVTAYVPNSGQGLIRLPYREKEWDPDFLEY 196

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223
            + L        +S  P ++ GD N     +     
Sbjct: 197 LRKL--------DSTKPVIVCGDLNVAHEEIDLARP 224


>gi|26246153|ref|NP_752192.1| hypothetical protein c0246 [Escherichia coli CFT073]
 gi|91209277|ref|YP_539263.1| hypothetical protein UTI89_C0228 [Escherichia coli UTI89]
 gi|110640424|ref|YP_668152.1| hypothetical protein ECP_0215 [Escherichia coli 536]
 gi|117622491|ref|YP_851404.1| hypothetical protein APECO1_1781 [Escherichia coli APEC O1]
 gi|237707797|ref|ZP_04538278.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331645378|ref|ZP_08346482.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|26106550|gb|AAN78736.1|AE016755_236 Hypothetical protein yafD [Escherichia coli CFT073]
 gi|91070851|gb|ABE05732.1| conserved hypothetical protein YafD [Escherichia coli UTI89]
 gi|110342016|gb|ABG68253.1| hypothetical protein YafD (endonuclease/exonuclease/phosphatase
           family domain) [Escherichia coli 536]
 gi|115511615|gb|ABI99689.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|226899007|gb|EEH85266.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|307552056|gb|ADN44831.1| conserved hypothetical protein YafD [Escherichia coli ABU 83972]
 gi|312944812|gb|ADR25639.1| hypothetical protein NRG857_01040 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|323948757|gb|EGB44657.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H252]
 gi|331045540|gb|EGI17666.1| putative cytoplasmic protein [Escherichia coli M605]
          Length = 274

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 95/303 (31%), Gaps = 73/303 (24%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P    ++  +++R++ WNI                ++     ++L+ Y K  
Sbjct: 33  FASIGQALPPGEPLSTEERIRILVWNIY--------------KQQRAEWLSVLKNYGK-- 76

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 77  DAHLVLLQEAQTTPELVQFATAN---------------YLAADQVPAFVLPQHPSGVMTL 121

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V++IH  +F     + +     
Sbjct: 122 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYS----- 176

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240
                   + L     Q      P ++AGDFN   +    N  +    + +   +RF  +
Sbjct: 177 --------KQLLPIGDQIAHHSGPVIMAGDFNAW-SRRRMNALYRFAREMSLRQVRFTDD 227

Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
           +  R            +D+                     N  +      R SDH P+ +
Sbjct: 228 QRRRAFGRP-------LDFVFYRG---------------LNVSEASVLVTRASDHNPLLV 265

Query: 301 DYD 303
           ++ 
Sbjct: 266 EFS 268


>gi|146310406|ref|YP_001175480.1| hypothetical protein Ent638_0743 [Enterobacter sp. 638]
 gi|167016789|sp|A4W6U9|Y743_ENT38 RecName: Full=UPF0294 protein Ent638_0743
 gi|145317282|gb|ABP59429.1| Endonuclease/exonuclease/phosphatase [Enterobacter sp. 638]
          Length = 266

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 90/305 (29%), Gaps = 77/305 (25%)

Query: 7   LALVFFLVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64
            A +   +P  A ++  +K+R++ WNI                ++     ++L+ + K  
Sbjct: 25  FASIGQALPAGAPLSSDEKIRVLVWNIF--------------KQQRAEWLSVLKNFGK-- 68

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA +V LQE  +   + +    N                  ++      +      V  L
Sbjct: 69  DAHLVLLQEAQTTPELVRFATTN---------------YLAADQVPAFVLPQHPSGVMTL 113

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSPS 180
             ++P+            R A   LV      + + + V++IH  +F     + +     
Sbjct: 114 SAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYS----- 168

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR--KINYLGNNDDFWKTIDPNDSLIRFP 238
                   + L     Q      P ++AGDFN   +           +            
Sbjct: 169 --------KQLLPIGDQIAHHSGPIIMAGDFNAWSRPRMNALYRFAREMSLREVRFTDDQ 220

Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298
           + K              P+D+                     N  +      R SDH P+
Sbjct: 221 RRKA----------FGRPLDFVFYRG---------------LNVHEASVLVTRASDHNPL 255

Query: 299 SIDYD 303
            +++ 
Sbjct: 256 LVEFS 260


>gi|300797398|ref|NP_001179019.1| 72 kDa inositol polyphosphate 5-phosphatase [Bos taurus]
 gi|297480854|ref|XP_002691665.1| PREDICTED: inositol polyphosphate-5-phosphatase E-like [Bos taurus]
 gi|296482101|gb|DAA24216.1| inositol polyphosphate-5-phosphatase E-like [Bos taurus]
          Length = 656

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 72/316 (22%), Gaps = 72/316 (22%)

Query: 26  LVSWNINT---LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80
           + +WN+     L       L         +D           D  +V +QE         
Sbjct: 315 VATWNMQGQKELPPNLDELLLP-----AEADLAQ--------DLYVVGVQEGCSDRREWE 361

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
           A++                      ++  ++ A+ +R+  +    +           S+ 
Sbjct: 362 ARLQETLGPHYVML--------YSAAHGALYMAVLIRRDLIWFCSEVESSTVTTRIVSQI 413

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSF-----------------------CFLDSLENTY 177
             + A+ +     G  +  +  H  S                            S   + 
Sbjct: 414 KTKGALGVSFTFFGTSLLFITSHFTSGDGKVGERLVDYSKTVQGLALPKNVPDTSPYRSD 473

Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235
           +   +    +  W  D+  +          ++  D +  +  L  +D   + +       
Sbjct: 474 AADVTTRFDEVFWFGDFNFRLSGGRAAVEAILKQDLSSSVQALLQHDQLTREMQRGSIFK 533

Query: 236 RF------------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283
            F                    +     R     D  +        +             
Sbjct: 534 GFQEPDIHFLPSYKFDVGKDSYDTTSKQRTPSYTDRILYRSRHQGDICP---------VK 584

Query: 284 DIKSRGKRLSDHCPIS 299
                G R SDH P+ 
Sbjct: 585 YSSCPGVRTSDHRPVY 600


>gi|224098214|ref|XP_002194713.1| PREDICTED: oculocerebrorenal syndrome of Lowe [Taeniopygia guttata]
          Length = 958

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 72/312 (23%), Gaps = 62/312 (19%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85
           + +WN+N  S    ++ W             L    +  D   +  QE+           
Sbjct: 299 VGTWNVNGQSPDSYLTPW-------------LVYDVEPPDFYCIGFQELDLSTEAFFYLD 345

Query: 86  KNTWCIFYSTERLINHSKRDSNNDIHTA-------IAVRKKNVRVLQQSYPLLGAKDSFS 138
                 + S      H K                 I  +K ++  +++            
Sbjct: 346 STKEQEWLSAVERSLHPKAKYKKVQMVRLVGMMLVIFAKKDHLSNIREVVTESVGTGVMG 405

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ- 197
           + GN+  V +    +     V++ HL +        N                 D +++ 
Sbjct: 406 KMGNKGGVAIRFMFHNTTFCVVNSHLAAHVEDFERRNQDYKDICARMSFLIPSSDCLSEL 465

Query: 198 KKESLVPFVIAGDFNRKINYLG-----------------NNDDFWKTIDPNDSLIRFPKE 240
                   +  GD N ++  L                    D          +   F + 
Sbjct: 466 NIMKHDVVIWLGDLNYRLCLLDASEVKNLISKNELQKLLTYDQLNIQRTQKKAFADFMEG 525

Query: 241 KDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288
             +     K                    D  +        L      E+          
Sbjct: 526 DINFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGGNVSQLRYCGHMEL---------- 575

Query: 289 GKRLSDHCPISI 300
             + SDH P+S 
Sbjct: 576 --KTSDHKPVSA 585


>gi|242065948|ref|XP_002454263.1| hypothetical protein SORBIDRAFT_04g027720 [Sorghum bicolor]
 gi|241934094|gb|EES07239.1| hypothetical protein SORBIDRAFT_04g027720 [Sorghum bicolor]
          Length = 945

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 77/252 (30%), Gaps = 33/252 (13%)

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
           +   +A+  +   +      +   +               + VR++ V+ +         
Sbjct: 656 VDDDDALPSIEGSDQRGAGMNYCLIARKQMVGIFLS----VWVRRELVQYVGHLRVDCVG 711

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ-QAQWLK 192
           +    R GN+  + + + ++   I  +  HL S           S    +L   Q Q + 
Sbjct: 712 RGIMGRLGNKGCIAMSMTLHHTSICFVCCHLASGEKEGDEVRRNSDVAEILKNAQFQRIC 771

Query: 193 ----DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK------- 241
                 + +K       +  GD N +++     ++    ++ N+  I   K++       
Sbjct: 772 KVPGQRVPEKIIDHDRIIWLGDLNYRVSLS--YEETKALLEENEWDILLEKDQLAMERQA 829

Query: 242 --------DSRCNANKNLRNKIPID-YFVMDQNAYKFLIQESFSEILY------NEDDIK 286
                   + +       + K   D Y      + K     ++ + +        +    
Sbjct: 830 GRVFKGWKEGKIYFAPTYKYKQNSDSYVWETAKSKKKRRTPAWCDRILWHGQGIEQLQYI 889

Query: 287 SRGKRLSDHCPI 298
               RLSDH P+
Sbjct: 890 RGEFRLSDHRPV 901


>gi|242043562|ref|XP_002459652.1| hypothetical protein SORBIDRAFT_02g008042 [Sorghum bicolor]
 gi|241923029|gb|EER96173.1| hypothetical protein SORBIDRAFT_02g008042 [Sorghum bicolor]
          Length = 593

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 82/284 (28%), Gaps = 59/284 (20%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R + WNI  + +               S    +R++ +  +  +V +QE    +     
Sbjct: 1   MRFLFWNIRGIGKS--------------SRKRQVREFIEEHNLQVVGIQETIKESFSDGD 46

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
             +      +S +      K          I +     ++  ++  +L            
Sbjct: 47  LLELAGNKVFSWKWSAAKGKSG-------GILMGVNQEKLEMEACDILE----------- 88

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
             V + +         + + +                         +L +  +  +++++
Sbjct: 89  YCVVMTIRNRFSNFRWVMVTV-YGPVQHEYSGD-------------FLAELDSVCQQTVL 134

Query: 204 PFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
           P +I GDFN        N D        +             ++  +     N ++K   
Sbjct: 135 PIIIGGDFNLIREESDKNSDNVNFHLMDQFNTFIGDHQLRELKRSGQRYTWTNKQSKP-- 192

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              +++      ++  S  E  Y         +  SDH P+ +D
Sbjct: 193 --IMVN---LDRVLFSSGWEEKYPLSLSWCLTRVGSDHSPVIVD 231


>gi|162147750|ref|YP_001602211.1| endonuclease/exonuclease/phosphatase family protein
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542375|ref|YP_002274604.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786327|emb|CAP55909.1| putative endonuclease/exonuclease/phosphatase family
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530052|gb|ACI49989.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 235

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 77/291 (26%), Gaps = 86/291 (29%)

Query: 14  VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73
           +P  A  +++ ++VSWN+  L                      +    +    D++ +QE
Sbjct: 25  LPANAGGSER-KIVSWNLLRLVGASPRD---------------VIHLIEQERPDLLLMQE 68

Query: 74  MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133
             S                     +  H  R         +A    +    Q     L +
Sbjct: 69  ATS-------------DFDALPHLIGGHYARSPLPGRIHGVACWSPSPFRRQPLTCTLPS 115

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                R      V  ++E       V ++HL     ++              +Q + L +
Sbjct: 116 GPLVRR------VAQMIECASFAFTVANVHLSHGQIMN-------------RRQLRRLGE 156

Query: 194 WITQKKESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
            +           + GDFN      + +  D       +  +                  
Sbjct: 157 ILPAHAA------VLGDFNLVGPTLMPHFRDVGPRAPTHRMVDMV--------------- 195

Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             I ID  ++                  +  + +      SDHCPI++  +
Sbjct: 196 -PIRIDRCLVRG---------------LSCTEARVLDNYTSDHCPITVRLE 230


>gi|40806693|gb|AAR92161.1| hypothetical protein [Mycobacterium fortuitum]
          Length = 310

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/314 (8%), Positives = 67/314 (21%), Gaps = 73/314 (23%)

Query: 3   RKYVLALVFFLVPCT---------------ASVAQKVRLVSWNINTLSEQEGVSLWKNSV 47
           R++VL ++   +  T                + +  +R+ + N+          +     
Sbjct: 48  RRWVLTVLAVGLTLTVALIQVPHFLGPEQVTAQSAPLRVFTSNLGMGLGDPAAVVAAAEQ 107

Query: 48  KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107
                    L              QE      +A    K+     +  + +         
Sbjct: 108 AADVVVLQELT-------------QEAAD-GVIAAGLEKSFRHRIFDPKPMAG------- 146

Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167
                 + +  +         P                +   V +    +  + + +   
Sbjct: 147 -----GLGIWSRFPLTDSAHVPGYSM----------VMLRTKVHVPDVAVAPILVGVHFA 191

Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227
                   ++           + L       +      ++AGDFN   + L   +     
Sbjct: 192 APWPQPIESWHKDMEKFPTMLRELA-----GEAGPGAVIVAGDFNATHDMLPFRELLATG 246

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                        +       +       ID+ ++       +  E              
Sbjct: 247 YRDAAEQAGAGMIRTFPVGTRRVPAVG--IDHVLLRNADATAVRTELVPGA--------- 295

Query: 288 RGKRLSDHCPISID 301
                 DH  +  D
Sbjct: 296 ------DHLALIAD 303


>gi|28867319|ref|NP_789938.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213970692|ref|ZP_03398817.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1]
 gi|301382579|ref|ZP_07230997.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063054|ref|ZP_07254595.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. tomato K40]
 gi|302133598|ref|ZP_07259588.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|28850553|gb|AAO53633.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213924526|gb|EEB58096.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1]
 gi|330876504|gb|EGH10653.1| exodeoxyribonuclease III [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|331018560|gb|EGH98616.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 259

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/274 (9%), Positives = 70/274 (25%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 19  LLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACEAEVPAQG----------GV 68

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       S       D + R          ++ +  K+ +  +   S    D   
Sbjct: 69  ALYSRLQPKAVISGLGFETADRYGRY---------LQADFDKVSIATLLFPSGMNGD--- 116

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF----------------NRKINYL 218
                  +   +       ++ +++     ++  G                         
Sbjct: 117 ----EDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLA 172

Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQNAYKFL 270
                  + +     +    +        +    N            DY ++     +F+
Sbjct: 173 PERAWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFV 232

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 233 RSA-----------RLPRQPRFSQHAPLIVDYDW 255


>gi|325116743|emb|CBZ52296.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Neospora caninum Liverpool]
          Length = 880

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 43/127 (33%), Gaps = 7/127 (5%)

Query: 24  VRLVSWNINTLSEQEGVSLW-KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           +R++++N+   S  +    +   ++ +  S   ++    +     I  LQE+ + +   +
Sbjct: 264 MRVMTFNVLAESLTDYKYRYLDQNIVKWASRVNVIEGEIRRHRPAICCLQELDASHYRKR 323

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
             P      F S      + ++            +R++   + Q+S        S     
Sbjct: 324 FLP-----FFRSLGYDGVYKQKTQGRADGVGTFWMRERFELLEQRSIEFRQHSKSLIDKP 378

Query: 142 NRRAVEL 148
               V L
Sbjct: 379 QVGLVVL 385


>gi|297708632|ref|XP_002831063.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A-like isoform 3 [Pongo abelii]
          Length = 638

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/326 (11%), Positives = 80/326 (24%), Gaps = 51/326 (15%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
                   ++ +V+WN+ T    + V+   +      +D   +           + LQE+
Sbjct: 48  AALGPSEPRITVVTWNVGTAMPPDDVTSLLHLGGGDDNDGADMIA---------IGLQEV 98

Query: 75  GS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129
            S     +      + W   +       +    S+  +   I +   +  ++  L+    
Sbjct: 99  NSMLNKRLKDALFTDQWSELFMDALGPFNFVLVSSVRMQGVILLLFAKYYHLPFLRDVQT 158

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                      GN+  V + +   G  +  L+ HL +             +   +    Q
Sbjct: 159 DCTRTGLGGYWGNKGGVSVRLAAFGHMLCFLNCHLPAHM---DKAEQRKDNFQTILS-LQ 214

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND--------------------------D 223
             +    Q           GD N +I     +                            
Sbjct: 215 QFQGPGAQGILDHDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWP 274

Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFV----MDQNAYKFLIQESFS 276
             K             + D   N        R     D  +              ++S  
Sbjct: 275 ILKGFQEGPLNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVKAPSGGPSPSGRKSHR 334

Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302
             +            +SDH P++  +
Sbjct: 335 LQVTQHSYRSHMEYTVSDHKPVAAQF 360


>gi|242761128|ref|XP_002340120.1| transposon I factor, putative [Talaromyces stipitatus ATCC 10500]
 gi|218723316|gb|EED22733.1| transposon I factor, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1384

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 70/249 (28%), Gaps = 45/249 (18%)

Query: 65  DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124
           DA  + +QE  +     ++         +   +++  + R+    I + + V K  V   
Sbjct: 454 DAVALAIQEPQARMVQGRLLTTPM--GHHKWTKMVPSAWREGRWAIRSMLWVNKD-VEAE 510

Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184
           Q          +  R   R  +   V + G                       + +    
Sbjct: 511 QVPIESPDLTAAVIRLPERLILMASVYVEGG---------------------DAQALRDT 549

Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNR----------KINYLGNNDDFWKTIDPNDSL 234
               +     + +   ++V  +I GDFNR           +   G  D     ++     
Sbjct: 550 CNHLRKAITKVRRTTGTVVEVLIVGDFNRHDQLWGGDDVSLERQGEADLIIDLMNEFALT 609

Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294
               +   +     +    +  ID  +  +N    +++ +               +  SD
Sbjct: 610 SLLKRGTKTWQGGGQGGDYESTIDLVLASENLTDSMVKCAIH-----------GTEHGSD 658

Query: 295 HCPISIDYD 303
           H  I   +D
Sbjct: 659 HRAIETVFD 667


>gi|218663832|ref|ZP_03519762.1| hypothetical protein RetlI_33637 [Rhizobium etli IE4771]
          Length = 368

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 2   IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61
           +R  +LA    L   +  +A  V++VSWNI         +     V    SDY  +    
Sbjct: 4   LRSLLLASGTLLATHS--LAADVKIVSWNI--------AASPYEQVLARASDYKTMADTL 53

Query: 62  KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121
                D++ L E+     +  +     W  +Y+T         + +  +   +  +    
Sbjct: 54  S---PDVIVLIELTGRTDIKAIADAIGWQTYYATVSDGQVQGDEIHASLEVGVLSKIPIT 110

Query: 122 RVL 124
            V+
Sbjct: 111 SVI 113


>gi|147790107|emb|CAN61039.1| hypothetical protein VITISV_018673 [Vitis vinifera]
          Length = 1941

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 76/281 (27%), Gaps = 52/281 (18%)

Query: 31   INTLSEQEGVSLWKNSVKRTTS-DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89
            I +L+  E         +        +++   ++  AD+  LQE    +   ++      
Sbjct: 1097 IESLTLDEDKDFILECKRANDRVKRKVIKALIRSQRADLACLQETKIQDMSRRIVHSLGV 1156

Query: 90   CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149
              F     +               + V                         NR    + 
Sbjct: 1157 GKFLGWGAMSARGAAG-------GVVVFWD----------------------NRVLELVG 1187

Query: 150  VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209
            +E++   I     + +                       + L        +   P+ I G
Sbjct: 1188 MEVSLFSILCCFKNCEDGFLWTFTGVYGPTMKRYRELFWEELGAIRGLWPD---PWCIGG 1244

Query: 210  DFN---------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
            DFN         R+     +   F++ I+                +   N  ++  +D F
Sbjct: 1245 DFNVVRFPNERSRERRLTESMRRFFEVIEELALRDLPLHGGLFTWSGGMNGLSRSRLDCF 1304

Query: 261  VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            ++ ++           E  ++     S  + +SDH PI +D
Sbjct: 1305 LISED----------WENHFSGAIQCSLPRPVSDHFPILLD 1335


>gi|262373464|ref|ZP_06066742.1| predicted protein [Acinetobacter junii SH205]
 gi|262311217|gb|EEY92303.1| predicted protein [Acinetobacter junii SH205]
          Length = 254

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 80/296 (27%), Gaps = 77/296 (26%)

Query: 23  KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82
           K+++++WN N                          +  K +DADI  +QE  S      
Sbjct: 20  KLKILTWNCNGAF-------------------RKKIELLKEIDADIYIIQECESEEKSQ- 59

Query: 83  VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142
                          L N   +  N +    +  +++                 +  +  
Sbjct: 60  ---------GTYDSWLPNRIWKGHNKNKGLGVFAKEQFKLEQL----------YWEDSNL 100

Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES- 201
              + L +  + + + V   +  S  F                Q    L  ++     + 
Sbjct: 101 ELFLPLKINDDFQLLAVWTKYANSPTF----------------QYIGQLWKYLQLHNTAI 144

Query: 202 -LVPFVIAGDFNRKINYLGNNDDF--------WKTIDPNDSLIRFPKEKDSRCNANKNLR 252
                +I GD N    +   +  +         KT++ +        E+  +   +    
Sbjct: 145 ATKATIICGDLNSNAQWDVWDRWWNHSDVVNQLKTMNIHSLYHELTNEEQGKEKNSTFFM 204

Query: 253 NKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           N+       IDY +    +        F          K    + SDH PI  D +
Sbjct: 205 NRNQEKNYHIDY-LFSHTSLFSGRNSHFKIF------DKDEWLQYSDHLPILFDLN 253


>gi|115374836|ref|ZP_01462110.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
 gi|310817631|ref|YP_003949989.1| ap endonuclease, family 1 [Stigmatella aurantiaca DW4/3-1]
 gi|115368145|gb|EAU67106.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390703|gb|ADO68162.1| AP endonuclease, family 1 [Stigmatella aurantiaca DW4/3-1]
          Length = 269

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 76/283 (26%), Gaps = 67/283 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
           + +R+V+ N+         + W                     +ADIVF+QE  +     
Sbjct: 47  EPLRVVTANLAFRGPDAVRNDWNTIGP----------------EADIVFVQEAKNVRLRD 90

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
            +          S+E     +     +      AV+      L +               
Sbjct: 91  ILGDGWVVRQDTSSEDRQGSAVVIRKS------AVKSIGELQLVKGTDASDCNSPEGGIM 144

Query: 142 NRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            R    + V++N  + +    +H+      + L + Y             + D      +
Sbjct: 145 TRWIARVDVQLNNHRWLRAASLHMPPARCQNGLGSPY-----------AVMADNAVAFAK 193

Query: 201 SLVPFVIAG-DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259
              P ++ G D+N+ ++   N       + P                          ID 
Sbjct: 194 RSEPLLVLGADWNKVVDADPNEIGARTGLKPRG------------------PDTGSRIDG 235

Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           F +                    +++    +  SDH P+ +  
Sbjct: 236 FYVSPAI--------------TTNNLHLLPQTGSDHRPVQMTI 264


>gi|87303809|ref|ZP_01086533.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701]
 gi|87281674|gb|EAQ73663.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701]
          Length = 97

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 23/83 (27%), Gaps = 16/83 (19%)

Query: 231 NDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYN 281
            + L    +  +           +           ID+  +              + +  
Sbjct: 4   ANGLQDVFRVFEPDAGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSCVIHKSVRG 63

Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304
            D       + SDH P+S+D D+
Sbjct: 64  ND-------KPSDHAPVSVDLDW 79


>gi|301628967|ref|XP_002943618.1| PREDICTED: protein tyrosine phosphatase domain-containing protein
            1-like, partial [Xenopus (Silurana) tropicalis]
          Length = 1253

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 64/248 (25%), Gaps = 56/248 (22%)

Query: 61   AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120
              + D     +QE             + W    S   +               +  R + 
Sbjct: 842  LGDEDPIPAGVQETRLTTRADLQRAASEWHHGPSFWSIAAEPCGG------VGVLFRSEL 895

Query: 121  VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
              V+ +   +   +           + L +   G+K+ +++I+    C   +        
Sbjct: 896  NVVVHRLVEIQVGR----------CLLLDITARGRKMRLINIYGPQSCQGRN-------- 937

Query: 181  CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWKTIDPN 231
                      L   + Q   + +P V+AGDFN+ +          Y          I   
Sbjct: 938  ---------ALLSDMRQYLHTSLPVVLAGDFNQVLRPQDRTGTKGYRTEGYFLNNIIQQA 988

Query: 232  DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291
              +    K   +  +          +D   +                     D++ +   
Sbjct: 989  GLVDVATKNGRTGRHTYHCAGRSSRLDMAFVGAG--------------ETFTDVREQAVE 1034

Query: 292  LSDHCPIS 299
             SDH  +S
Sbjct: 1035 YSDHLAVS 1042


>gi|121586288|ref|ZP_01676078.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121549554|gb|EAX59580.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
          Length = 281

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 84/282 (29%), Gaps = 64/282 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ L+ WNI           +K +    ++  T L +     D  ++ LQE     A  
Sbjct: 59  GELNLLVWNI-----------YKQNRANWSTQLTELSR-----DQQLLLLQEANMTPAFK 102

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +  W            ++          +    K +  +  +Y  L          
Sbjct: 103 EWIHQLGWD--------GTQARAFEAFGETAGVINLAKVMPTMACAYTQLEP----WLRL 150

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            + A+     + +G+++ V+++H  +F +                   Q L   + + ++
Sbjct: 151 PKSAIYARYRLSDGQELVVVNLHAVNFTYGTQEYQ-------------QQLIALLDELRD 197

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++AGDFN          +    +          +E     +      N +P+D+ 
Sbjct: 198 FTGPVIVAGDFNSW-------SEARMALLSTQLASVGLQEVRFSPDNRTTFINGLPLDHV 250

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +                        SDH P+ + +
Sbjct: 251 FYRGLQLEKAEAPI---------------SDASDHNPLLVRF 277


>gi|303236615|ref|ZP_07323196.1| conserved domain protein [Prevotella disiens FB035-09AN]
 gi|302483119|gb|EFL46133.1| conserved domain protein [Prevotella disiens FB035-09AN]
          Length = 193

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 41/105 (39%), Gaps = 14/105 (13%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
           A+ ++++S+N+   S  +   L  N           + +Y +  +ADIV LQE      V
Sbjct: 98  ARAIKVLSYNVYMFSPWDLEDLSNNP----------IVKYIQQSNADIVCLQETN----V 143

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125
           ++   +N +    S     +     S  + H  +  +    +  +
Sbjct: 144 SEAGGRNVYEALVSKYPYYHILHAHSPGNQHMMVLSKFPIKKRSK 188


>gi|242081481|ref|XP_002445509.1| hypothetical protein SORBIDRAFT_07g020740 [Sorghum bicolor]
 gi|241941859|gb|EES15004.1| hypothetical protein SORBIDRAFT_07g020740 [Sorghum bicolor]
          Length = 399

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 90/342 (26%), Gaps = 78/342 (22%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA------ 81
           +WN+  ++  + +SL      +T            + D  ++  QEM   NA        
Sbjct: 57  TWNVGGVAPPDDLSLEDWLDTKTD-----------SYDIYVLGFQEMVPLNARTVLGPKQ 105

Query: 82  ------------KVFPKNTWCIFYSTERLINHSKRDSNN--------DIHTAIAVRKKNV 121
                                   +                       I  ++  R    
Sbjct: 106 RRAAMKWQLLIGDALNSTRHGDGAAAMHDQGRQGGGVFRCLVSKQMVGIFVSVWTRTSLR 165

Query: 122 RVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
           R   +   +         R GN+ AV +   ++G     +  HL S      +    + +
Sbjct: 166 RHAVRHPAVSSVGAGVLGRLGNKGAVSVRFLLHGTSFCFVCCHLASGGEEGDVLRRNADA 225

Query: 181 CSLLSQQ-------AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-------- 225
             +L++        A    D + +K       V+ GD N +I    + +           
Sbjct: 226 ADILTRTSFLSSGGAPAAPDELPKKILGHDRVVLFGDLNYRIAKDDDEEARQLVRARKWS 285

Query: 226 ---------KTIDPNDSLIRFPKEKDSRCNANKNLRNK-------------IPID--YFV 261
                      +        + + + +     K  RN                +D     
Sbjct: 286 MLLENDELLLELSSGRQFDGWHEGRVAFAPTYKYRRNSDQFCWCADGGVATGRLDKQQHR 345

Query: 262 MDQNAYKFLIQESFSEILYNEDDIKS-RGKRLSDHCPISIDY 302
             + A  +  +  +      +   +   G RLSDH P+   +
Sbjct: 346 HRRRAPAWCDRILWRGKGMKQVRYERCGGYRLSDHRPVRAVF 387


>gi|149408893|ref|XP_001507443.1| PREDICTED: similar to proline-rich inositol polyphosphate
           5-phosphatase [Ornithorhynchus anatinus]
          Length = 768

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 80/315 (25%), Gaps = 52/315 (16%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81
           + +V+WN+ T    + V+   +     +S   ++           + LQE+ S     + 
Sbjct: 168 ITVVTWNVGTAMPPDDVTSLLHLNTDESSTTDMIA----------IGLQEVNSMINKRLK 217

Query: 82  KVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFS 138
                + W  +F       N     +       + V  +  ++  LQ             
Sbjct: 218 DALFTDQWSELFMEVLAPFNFVLVSTVRMQGVILLVFAKYYHLPFLQNVQTDCTRTGLGG 277

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
             GN+  V + + I G  +  L+ HL +    D  E       ++L+ Q    +      
Sbjct: 278 YWGNKGGVSVRLSIFGHMVCFLNCHLPAHM--DKAEQRKDNFMTILNMQ--QFEGPTAHG 333

Query: 199 KESLVPFVIAGDFNRKINYLGNND--------------------------DFWKTIDPND 232
                     GD N +I     +                              K      
Sbjct: 334 ILDHDIVFWFGDLNFRIESYDLHFVKFAIDNNKLHQLWEKDQLNMAKSSWPVLKGFQEGP 393

Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFVM---DQNAYKFLIQESFSEILYNEDDI- 285
                  + D   N        R     D  +                   +   ++   
Sbjct: 394 LTFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKIKTPGGGPSPSGRERQRLQVTQNSYC 453

Query: 286 KSRGKRLSDHCPISI 300
                 +SDH P+  
Sbjct: 454 SHMEFTVSDHKPVVA 468


>gi|304560004|gb|ADM42668.1| hypothetical protein ETAF_2566 [Edwardsiella tarda FL6-60]
          Length = 253

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 84/284 (29%), Gaps = 70/284 (24%)

Query: 19  SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78
                +R++ WNI                ++     ++L++Y +     +V LQE  +  
Sbjct: 37  PTDDALRIMVWNIF--------------KQQRADWLSVLKEYGRRSQ--LVLLQEAQTTP 80

Query: 79  AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138
            + +          +S  +  +     +         +R+K   +      L+     F 
Sbjct: 81  ELVRFATSVP---AFSLPQHPSGVMTLAAAHPIYCCPLREKEPLIRLAKSALVTVYPLF- 136

Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198
                         +G+ + V++IH  +F     + +             + L     Q 
Sbjct: 137 --------------DGRLLMVVNIHAVNFSLGVEVYS-------------KQLDPIGEQI 169

Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258
                P ++AGDFN   N           +    S +   +   +  +          +D
Sbjct: 170 ALHKGPVIMAGDFNAWSNRR------LNALRRFASGMELREVHFTNDHRRTAFGRP--LD 221

Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
           +          +++ S                + SDH P+ +++
Sbjct: 222 FVFYRG---LGVVEASVLVT------------QASDHNPLLVEF 250


>gi|311895759|dbj|BAJ28167.1| hypothetical protein KSE_23490 [Kitasatospora setae KM-6054]
          Length = 346

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 73/301 (24%), Gaps = 71/301 (23%)

Query: 7   LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66
           L L   L+    S      +++ N+   ++    +                 +      A
Sbjct: 114 LNLFGALLADKGSGPGDFTVLTHNVAAANDDPQGT----------------VRMLTGSGA 157

Query: 67  DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126
           +IV                + +        R +  +      +    +        V   
Sbjct: 158 EIV-------------ALEELSAAAAPEYARALAGAFPYHVVEGTVGLWSSYPIDEVEVV 204

Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS 185
              +   +          A    V      + V   HL S     DS         S   
Sbjct: 205 DIKMGWTR----------AFRARVTTPKGPLAVYVAHLPSVRVKFDSGFTAGRRDVS--- 251

Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245
             AQ L D I  +       ++ GD N  +N         +++ P  S +R  +      
Sbjct: 252 --AQALGDAIEHEPLRK--VLLLGDLNGTMND--------RSLAPITSQLRSAQGAAGDG 299

Query: 246 NANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
                        ID  +         +      +  +           SDH  ++ DY 
Sbjct: 300 FGFSWPASFPMARIDQILSKGGL----VPTDSRTLPAD----------ASDHLAVAADYR 345

Query: 304 F 304
           +
Sbjct: 346 Y 346


>gi|32472396|ref|NP_865390.1| hypothetical protein RB3242 [Rhodopirellula baltica SH 1]
 gi|32443632|emb|CAD73074.1| hypothetical protein-transmembrane prediction [Rhodopirellula
           baltica SH 1]
          Length = 439

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 49/166 (29%), Gaps = 19/166 (11%)

Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----KDWI----------TQK 198
           N + + +L  H     F    +     +   +    +++     +WI             
Sbjct: 273 NHRVLHLLASHPTPPVFDGDEDRNGKRNHDEIRFWDEYISEPEAEWIVDDQGFMGGLKSD 332

Query: 199 KESLVPFVIAGDFNRKINY-LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257
             +   FVIAGD N                I         P       +  K  RN+I +
Sbjct: 333 SSADAMFVIAGDLNSDPKQGDSLRSGITNLISNPRVRDAMPTSSQHGISTAKFGRNEIRV 392

Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
           DY +   N +          +  +      +  R +DH  I ID +
Sbjct: 393 DYVLPSSNLHVIRSA----VVWPDAQTDLGKRVRATDHRMIWIDIE 434



 Score = 40.7 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 37/143 (25%), Gaps = 3/143 (2%)

Query: 20  VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79
             + +R+ S+N++   +Q G    +      +     L    + +  DI+ L E+     
Sbjct: 75  STETIRVASFNVSLYGKQAGEVAERLLAGDDSQATD-LATVIQTVRPDILLLCEIDHEPD 133

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139
              +       +      +    +     +  T +              P          
Sbjct: 134 GRTLNAFADGYLAKGNAAIDYPHRWSIPTN--TGLLGDLDLDSDGDVELPTDAHGFGQYP 191

Query: 140 AGNRRAVELLVEINGKKIWVLDI 162
                AV    EI+   I     
Sbjct: 192 GQYAMAVLSRFEIDRDAIRTFQT 214


>gi|258573517|ref|XP_002540940.1| hypothetical protein UREG_00453 [Uncinocarpus reesii 1704]
 gi|237901206|gb|EEP75607.1| hypothetical protein UREG_00453 [Uncinocarpus reesii 1704]
          Length = 499

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/239 (9%), Positives = 43/239 (17%), Gaps = 59/239 (24%)

Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKD---SFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166
                    K  +     Y  L   D    +        +    +    +   + +   +
Sbjct: 6   GWDCFFSLPKQKKGSTTPYRELSKDDQIGGYPNFEQLELLSFDPKTIDSEGRCVILEFPA 65

Query: 167 FCFLDSLENTYSPSCS--LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------- 216
           F  L                S     L   +          ++ GD N   +        
Sbjct: 66  FVLLGVYCPANRDENRDAFRSDFLNALDMRVRNLIAIGKRVIVMGDLNVSSDILDSAHAI 125

Query: 217 --------------YLGNNDDFWKTIDPNDS------------LIRFPKEKDSRCNANKN 250
                                F + +                 L        +R      
Sbjct: 126 EAIRKCKLTELEFLSSPPRLLFNQLVKGGKPGTHEIEQKPQVLLDLCRNFHPNRQGMYTC 185

Query: 251 L---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300
                          IDY +   +   + +                 G   SDHCP+  
Sbjct: 186 WEQRINARPGNYGARIDYVLCSMDMEDWFVWSDIQ-----------EGLMGSDHCPVYA 233


>gi|241205743|ref|YP_002976839.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859633|gb|ACS57300.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 310

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 73/303 (24%), Gaps = 75/303 (24%)

Query: 1   MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60
           M+R++V            S     RL+S+NI   +   G                 +   
Sbjct: 78  MMREFV------EPSVEESRPALFRLMSFNIENDNFANGPD---------------IADM 116

Query: 61  AKNLDADIVFLQEMGS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119
                AD V + E     + + ++     + +                        V  K
Sbjct: 117 VIGSGADAVNILEAEPLLSELPRLLKTYPYYV------------GCGVGMEQCDTLVLSK 164

Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179
              +  +         +       R     ++ +G+K+  L  HL    +          
Sbjct: 165 RPLIEPR-------IRNLGLLWRNRLTISTIDFDGQKVNFLAAHLTKPYYD--------- 208

Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239
                  +   L + I        P V+AGDFN  I                        
Sbjct: 209 --EFHGLEIWDLAEIIPTLSG---PLVLAGDFNTSILAPDVQYLMRTQ-------ALGTV 256

Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
             +      +     IPID+           +              +      S+H  + 
Sbjct: 257 SLEPATWPIRAGAFGIPIDHIFTRAPLRLKSV-------------RRIENGFGSNHFGLM 303

Query: 300 IDY 302
            ++
Sbjct: 304 AEF 306


>gi|153825332|ref|ZP_01977999.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149741016|gb|EDM55085.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 281

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 84/282 (29%), Gaps = 64/282 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ L+ WNI           +K +    ++  T L +     D  ++ LQE     A  
Sbjct: 59  GELNLLVWNI-----------YKQNRANWSTQLTELSR-----DQQLLLLQEANMTPAFK 102

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +  W            ++          +    K +  +  +Y  L          
Sbjct: 103 EWIHQLGWD--------GTQARAFEAFGETAGVINLAKVMPTMACAYTQLEP----WLRL 150

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            + A+     + +G+++ V+++H  +F +                   Q L   + + ++
Sbjct: 151 PKSAIYARYRLSDGQELVVVNLHAVNFTYGTQEYR-------------QQLTALLDELRD 197

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++AGDFN          +    +          +E     +      N +P+D+ 
Sbjct: 198 FTGPVIVAGDFNSW-------SEARMALLSTQLASVGLQEVRFSPDNRTTFINGLPLDHV 250

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +                        SDH P+ + +
Sbjct: 251 FYRGLQLEKAEAPI---------------SDASDHNPLLVRF 277


>gi|108864082|gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1301

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 63/293 (21%), Gaps = 59/293 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            C       +++++WN   L     V                L    K  D DI+FL   
Sbjct: 416 SCFCINKYPMKIIAWNCRGLGNGPTVRG--------------LLNLQKEDDPDILFL--- 458

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +            W +                               ++ +        
Sbjct: 459 SNTKMDTNKLQCFRWKLGM---------------------------PNLVVKDCQGKSGG 491

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            +             V      + V++     + F        S    L  +  + L   
Sbjct: 492 LAVFWKKEINLRLRTVSRLFMDVDVMEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLN-- 549

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID-----PNDSLIRFPKEKDSRCNANK 249
                     ++  GDFN  +          K                        +   
Sbjct: 550 ----ATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFTGDPFT 605

Query: 250 NLRNKIPID-YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              N    D Y    +      + +S     +    ++    R SDH P+ + 
Sbjct: 606 WRNNWCVRDGYI---RERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHPVIVT 655


>gi|62733010|gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
 gi|62733115|gb|AAX95232.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1324

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 63/293 (21%), Gaps = 59/293 (20%)

Query: 15  PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
            C       +++++WN   L     V                L    K  D DI+FL   
Sbjct: 439 SCFCINKYPMKIIAWNCRGLGNGPTVRG--------------LLNLQKEDDPDILFL--- 481

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
            +            W +                               ++ +        
Sbjct: 482 SNTKMDTNKLQCFRWKLGM---------------------------PNLVVKDCQGKSGG 514

Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
            +             V      + V++     + F        S    L  +  + L   
Sbjct: 515 LAVFWKKEINLRLRTVSRLFMDVDVMEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLN-- 572

Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID-----PNDSLIRFPKEKDSRCNANK 249
                     ++  GDFN  +          K                        +   
Sbjct: 573 ----ATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFTGDPFT 628

Query: 250 NLRNKIPID-YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
              N    D Y    +      + +S     +    ++    R SDH P+ + 
Sbjct: 629 WRNNWCVRDGYI---RERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHPVIVT 678


>gi|269101973|ref|ZP_06154670.1| hypothetical protein VDA_001392 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161871|gb|EEZ40367.1| hypothetical protein VDA_001392 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 287

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 74/282 (26%), Gaps = 65/282 (23%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ +  WNI           +K            + Q      +++V LQE      + 
Sbjct: 61  GQLTVSVWNI-----------YKQQRPNWQQALDNISQ-----HSELVLLQEATLKPELK 104

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +      W +  +              D    +    K   V         A + + R  
Sbjct: 105 QYLQDKPWKVRMA--------NAFRFLDTPAGVMNLSK---VEAMKTCAYLAMEPWLRLP 153

Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201
               +      NG+ + V+++H  +F                   Q + L   + +    
Sbjct: 154 KSALLSQFALSNGQTLAVVNLHGVNFAMGLEEYKA----------QFKSLASALQKHVG- 202

Query: 202 LVPFVIAGDFNR-KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
             P ++AGDFN  +   +     F   +   +   R  +                 +D+ 
Sbjct: 203 --PVILAGDFNTWRKGRMDVVKQFAHQLGLKEVQFRQDQRIKVFGKP---------LDHL 251

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                                 +  ++     SDH PI   +
Sbjct: 252 FYRG---------------LVLETAEAPKTDASDHNPIIATF 278


>gi|297722873|ref|NP_001173800.1| Os04g0220500 [Oryza sativa Japonica Group]
 gi|255675234|dbj|BAH92528.1| Os04g0220500 [Oryza sativa Japonica Group]
          Length = 1510

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 19/124 (15%)

Query: 189  QWLKDWITQKKESLVPFVIAGDFN--RKINYLG----NNDDFWKTIDPNDSLIRFPKEKD 242
             +L++ + +     +PF++ GDFN  R  +       +     K              + 
Sbjct: 1164 DFLREILGKSNSMQIPFMMGGDFNMIRFPDEKSNGNIHKRWADKFNSFIALAELRELHRS 1223

Query: 243  SRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                   N +       +D  ++  +           E +Y    +KS  +  SDH P+ 
Sbjct: 1224 GGKYTWTNKQADPVMEVLDRVLVSSS----------WEEMYPLTMVKSLLRVGSDHNPLL 1273

Query: 300  IDYD 303
            ++ +
Sbjct: 1274 VELE 1277


>gi|253689509|ref|YP_003018699.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251756087|gb|ACT14163.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 262

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 92/283 (32%), Gaps = 63/283 (22%)

Query: 21  AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80
              +R++ WNI                ++  +  ++L+ + K     +V LQE  S   +
Sbjct: 41  GDVLRVMVWNIF--------------KQQRMNWLSVLQNFGKGTQ--LVLLQEAQSTPDL 84

Query: 81  AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140
            +    N    + S +++         + + T  A +      L++  PLL    S    
Sbjct: 85  IRFATTN----YLSADQVPAIILPQHPSGVMTLSAAQPVYCCPLREREPLLRLAKSS--- 137

Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
                V +    NG+++ V++IH  +F F   +               + L     Q   
Sbjct: 138 ----LVTVYALQNGQRLMVINIHAVNFSFGVEVYT-------------KQLAAIGEQLLH 180

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++AGDFN             +    N    R   ++ S  +  +      P+D+ 
Sbjct: 181 HQGPAIMAGDFNAWSQ--------QRINALNRFATRMGLQEVSFVDDQRRKAFGRPLDFV 232

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
              +                  +       + SDH P+ +++ 
Sbjct: 233 FYRE---------------LTVNQSSVLVTQASDHNPLLVEFS 260


>gi|222628405|gb|EEE60537.1| hypothetical protein OsJ_13877 [Oryza sativa Japonica Group]
          Length = 869

 Score = 47.2 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 19/124 (15%)

Query: 189 QWLKDWITQKKESLVPFVIAGDFN--RKINYLG----NNDDFWKTIDPNDSLIRFPKEKD 242
            +L++ + +     +PF++ GDFN  R  +       +     K              + 
Sbjct: 680 DFLREILGKSNSMQIPFMMGGDFNMIRFPDEKSNGNIHKRWADKFNSFIALAELRELHRS 739

Query: 243 SRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299
                  N +       +D  ++  +           E +Y    +KS  +  SDH P+ 
Sbjct: 740 GGKYTWTNKQADPVMEVLDRVLVSSS----------WEEMYPLTMVKSLLRVGSDHNPLL 789

Query: 300 IDYD 303
           ++ +
Sbjct: 790 VELE 793


>gi|255716948|ref|XP_002554755.1| KLTH0F13002p [Lachancea thermotolerans]
 gi|238936138|emb|CAR24318.1| KLTH0F13002p [Lachancea thermotolerans]
          Length = 936

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/316 (10%), Positives = 80/316 (25%), Gaps = 69/316 (21%)

Query: 28  SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87
           ++N+N     + +  W         +           D  ++  +E+   +    +    
Sbjct: 532 TFNVNGRMYPDDIGSWLFPPSVDMGNLP---------DVYVLGFEEVVELSPGHMLSTDP 582

Query: 88  TWCIFYSTERLINHSKRDSNNDIHT-----------AIAVRKKNVRVLQQSYPLLGAKDS 136
               F+  + L   +   +   I                   +  +V       +     
Sbjct: 583 YAKQFWEKKILGTLNSVGNKKFIQVWGGQLGGVLLLLFISESEYGKVKHLEG-DVKKTGF 641

Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196
              + N+ AV +    +  K  +L  HL +                      + ++    
Sbjct: 642 GGMSSNKGAVAVSFTYSTTKFCLLVSHLAAGLENVD------QRHHDYKTIVKNIRFSRN 695

Query: 197 QKKESLVPFVIAGDFNRKINYLG----------------NNDDFWKTIDPNDSLIRF--- 237
              +     +  GDFN +I+                     D   + +   +S   +   
Sbjct: 696 LTIKDHDVVIWMGDFNYRISLPNDEVRRRVSGNDYEALFERDQLNQQMIAGESFPYYNEM 755

Query: 238 ------PKEKDSRCNANKNLRNKIPI----DYFVMDQNAYKFLIQESFSEILYNEDDIKS 287
                   + D           K+ I    D  +   ++ +     S   I++       
Sbjct: 756 EIKFPPTYKFDPGTKTYDT-SEKLRIPAWTDRILSRGDSVRQASYGSAENIIF------- 807

Query: 288 RGKRLSDHCPISIDYD 303
                SDH P+   ++
Sbjct: 808 -----SDHRPVFATFN 818


>gi|183984611|ref|YP_001852902.1| hypothetical protein MMAR_4644 [Mycobacterium marinum M]
 gi|183177937|gb|ACC43047.1| conserved hypothetical exported protein [Mycobacterium marinum M]
          Length = 516

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 83/292 (28%), Gaps = 31/292 (10%)

Query: 10  VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69
           +F     T +++    ++++NI  L      ++       T      L  +       + 
Sbjct: 236 IFVGNIPTGTISGDFSMLTYNIAGLPFPLSSAMLP-RFLYTKEIGKRLNNF------SVS 288

Query: 70  FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129
            +QE  SY+       +       S   L+        +D   ++AV K  V+ L +   
Sbjct: 289 NVQEDFSYHEFLIKKSRMPSQTPPSPPTLLWPIGV-PFSDGLNSLAVFK--VKRLDRQTW 345

Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189
                D  +    +      +++ G    +   +L +      L N             +
Sbjct: 346 FQCDAD--NCLTPKGFSYSQLQLPGGN-TMDLYNLHANTGGGVLTNAN----------LR 392

Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249
            L ++I Q   +    ++ GDFN   +        +              E         
Sbjct: 393 QLANYILQN-SAGRAVIVTGDFNALYSEDQAGLLDFAGSTGLTDA-WVEVEHGPTTPPFA 450

Query: 250 NL----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
                      +D           L   ++       +   S G+ LSDH P
Sbjct: 451 PDCMVGNECELLDKIFYRSGTGVTLQATAY--SNEAPNFNNSNGQPLSDHSP 500


>gi|115690878|ref|XP_001203363.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115733868|ref|XP_001198861.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 176

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 48/176 (27%), Gaps = 20/176 (11%)

Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205
           V +L + +  +  +   +   +    +       + ++L    +  +  + +  +  +  
Sbjct: 1   VAVLEDCHDPRRRICVANTHLYFHPRAGHIRLIQTITILRHLQKIQQQHLEKNPDIKLAM 60

Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-------------------N 246
           ++ GD N      G  +   K   P +++  +   K+  C                    
Sbjct: 61  ILCGDLNSAPTCPGVFELLSKKHIPENNVQWYCGGKEEFCGGMTLSHSLDFTNACTSQEY 120

Query: 247 ANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301
            N        +DY ++   +                           SDH  I  D
Sbjct: 121 TNFVAGFVASLDYVLIDSNHLEVLREIPMPDHDDVIAHVALPNEVFPSDHLAIGCD 176


>gi|6323941|ref|NP_014012.1| Ngl2p [Saccharomyces cerevisiae S288c]
 gi|2497217|sp|Q03264|NGL2_YEAST RecName: Full=RNA exonuclease NGL2; AltName: Full=Carbon catabolite
           repressor protein 4 homolog
 gi|825551|emb|CAA89783.1| unknown [Saccharomyces cerevisiae]
 gi|190408511|gb|EDV11776.1| RNase [Saccharomyces cerevisiae RM11-1a]
 gi|256270686|gb|EEU05849.1| Ngl2p [Saccharomyces cerevisiae JAY291]
 gi|259148873|emb|CAY82118.1| Ngl2p [Saccharomyces cerevisiae EC1118]
 gi|285814291|tpg|DAA10186.1| TPA: Ngl2p [Saccharomyces cerevisiae S288c]
 gi|323346978|gb|EGA81255.1| Ngl2p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323353212|gb|EGA85512.1| Ngl2p [Saccharomyces cerevisiae VL3]
          Length = 515

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/240 (11%), Positives = 70/240 (29%), Gaps = 28/240 (11%)

Query: 11  FFLVPCTASVAQ-KVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           F  +     V   + +L+++N +     +  +        +      +L    K  ++D+
Sbjct: 98  FLSLHEAEPVTGFRFKLMTYNCLAQALIRRKLFPDSGDALKWYRRSKVLLNEFKYYNSDV 157

Query: 69  VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128
           + LQE+           ++ W   +S         R++  +   AI  R++    + +  
Sbjct: 158 ICLQEIDHIQF------QSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRRELFHQVDKML 211

Query: 129 PLL----GAKDSFSRAGNRRAVELLVEINGKKI----------WVLDIHLKSFCFLDSLE 174
                      S     N   + L ++ + K +            + I      +     
Sbjct: 212 IDYDKESSESISTRTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGTTHLFWHPFGT 271

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVP------FVIAGDFNRKINYLGNNDDFWKTI 228
              +  C ++ ++ +     +   +               GDFN +           K +
Sbjct: 272 YERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDTPYLSMTSKPV 331


>gi|302501420|ref|XP_003012702.1| hypothetical protein ARB_00953 [Arthroderma benhamiae CBS 112371]
 gi|291176262|gb|EFE32062.1| hypothetical protein ARB_00953 [Arthroderma benhamiae CBS 112371]
          Length = 1163

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 86/320 (26%), Gaps = 68/320 (21%)

Query: 26  LVSWNINT---LSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79
           + ++NIN     + +        S+ +   D T++    Q    L       Q++ S + 
Sbjct: 610 VGTFNINGRREGATEGLGPWLHGSLNQLPEDPTIVAVGFQEIVELSP-----QQIMSTDP 664

Query: 80  VAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTA----IAVRKKNVRVLQQSYPLLGA 133
             +   ++      +       +       +         + V+K  +  ++     L  
Sbjct: 665 STRKIWEHAVISSLNARTTKRKTTEYVLLRSGQLVGAALLLFVKKDVINKIKNVEGSLKK 724

Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193
                  GN+ AV + ++ +   I  +  HL +        N            A+ L+ 
Sbjct: 725 TGLSGMGGNKGAVAIRLDYSNTSICFITAHLAAGFSNYEERNRD------YHTIARGLRF 778

Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE------------- 240
              +        +  GDFN +I            I+  D  + +  +             
Sbjct: 779 QRNRPIVGHDATIWFGDFNYRIGLSNER--VRPLIESGDIDVLYQHDQLNLQMVAGLAFQ 836

Query: 241 -------KDSRCNAN------KNLRNKIPI----DYFVMDQNAYKFLIQESFSEILYNED 283
                                 +   K  I    D  +      + L             
Sbjct: 837 YYMEGPVTFPPTYRYDNGTDEYDTSEKQRIPAWCDRILWRGRILRQLA------------ 884

Query: 284 DIKSRGKRLSDHCPISIDYD 303
             K+   + SDH P+   ++
Sbjct: 885 -YKTAPLKFSDHRPVYATFE 903


>gi|225424470|ref|XP_002281659.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297737580|emb|CBI26781.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/337 (10%), Positives = 86/337 (25%), Gaps = 63/337 (18%)

Query: 26  LVSWNI------NTLSEQEGVSLWKNSVKRTTSDYTLL-----RQYAKNLDADIVF---- 70
           + +WN+        L+ ++ +   K S       +  +          + ++ I      
Sbjct: 60  VSTWNVGGVAPPEGLNIEDWLDTCKTSCDIYVLGFQEVVPLNAANILGSENSKIAMKWNS 119

Query: 71  -LQEMGSYNAVAK------------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV- 116
            ++E  +    ++                         E       R   +     I + 
Sbjct: 120 LIREALNKRVRSRDKNEIDKQAGEMQNGFPVKDGKLVIESRGPQDYRCIISKQMVGILIS 179

Query: 117 ---RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173
              R   +  +Q               GN+ +V +   ++G     +  HL S   +   
Sbjct: 180 VWVRSSLLPYIQHPSVSCVGCGIMGCLGNKGSVSIRFLLHGTSFCFVCCHLASGGRVGHE 239

Query: 174 ENTYSPSCSL--LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN----------- 220
            +  S +  +   +   +     + QK       ++ GD N +++               
Sbjct: 240 RHRNSNAADILSRTSFPRGPSLDVPQKILDHDRVILLGDLNYRVSLPEETTRLLVDKREW 299

Query: 221 -----NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---------A 266
                ND     +     L  + +         K   N           +         A
Sbjct: 300 STLLENDQLMMEVMDGQVLGGWQEGHIEFAPTYKYYPNSD----VYYGGSQGQKGEKRRA 355

Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303
             +  +  +      +        ++SDH P+   + 
Sbjct: 356 PAWCDRIIWYGKGLKQQLYTRGEVKISDHRPVKAIFT 392


>gi|67623175|ref|XP_667870.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54659030|gb|EAL37629.1| hypothetical protein Chro.40217 [Cryptosporidium hominis]
          Length = 783

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/188 (10%), Positives = 41/188 (21%), Gaps = 54/188 (28%)

Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP-------FVIAGDFNRKINYLGN--- 220
           ++       +  +   QAQ L   + +               +I GDFN   +       
Sbjct: 594 NTHIVANPEANDVKIWQAQTLVSVLEEYLHDCYRRQPVLPGLIICGDFNSTPDSALYRLL 653

Query: 221 ----------------------------------NDDFWKTIDPNDSLIRFP-KEKDSRC 245
                                                    ++ ++  +     E     
Sbjct: 654 ATGTCEKTHKDLAMDRYGLLSDLQLGHSMRLRSAYSMAKAMVEGHNPNMLVSSTESLEPV 713

Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE---------DDIKSRGKRLSDHC 296
             N        +DY        +        +              D      +R SDH 
Sbjct: 714 FTNYTPNYLGCLDYVFYTDERLRLGGVLELLDEEALIREAAALQLPDWSLPNPQRPSDHL 773

Query: 297 PISIDYDF 304
           P+  ++++
Sbjct: 774 PLLTEFEW 781



 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 2/97 (2%)

Query: 17  TASVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
           TA    + ++ SWN+     + QE        +   +   T +     +   DIV LQE+
Sbjct: 351 TAISHSRFKVFSWNVLAEIYASQEAFPHCDAYMLSWSYRKTRIIVEILSHQPDIVCLQEV 410

Query: 75  GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111
            + +      P      +    +        S +   
Sbjct: 411 QTEHFDDFFKPVLQQYGYEGVYKQKTTEIFTSGSGRR 447


>gi|254286453|ref|ZP_04961410.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150423402|gb|EDN15346.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 281

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 84/282 (29%), Gaps = 64/282 (22%)

Query: 22  QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81
            ++ L+ WNI           +K +    ++  T L +     D  ++ LQE     A  
Sbjct: 59  GELNLLVWNI-----------YKQNRANWSTQLTELSR-----DQQLLLLQEANMTPAFK 102

Query: 82  KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141
           +   +  W            ++          +    K +  +  +Y  L          
Sbjct: 103 EWIHQLGWD--------GTQARAFEAFGETAGVINLAKVMPTMACAYTQLEP----WLRL 150

Query: 142 NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200
            + A+     + +G+++ V+++H  +F +                   Q L   + + ++
Sbjct: 151 PKSAIYARYRLSDGQELVVVNLHAVNFTYGTQEYR-------------QQLTALLDELRD 197

Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260
              P ++AGDFN          +    +          +E     +      N +P+D+ 
Sbjct: 198 FTGPVILAGDFNSW-------SEARMALLSTQLASVGLQEVRFSPDNRTTFINGLPLDHV 250

Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  +                        SDH P+ + +
Sbjct: 251 FYRGLQLEKAEAPI---------------SDASDHNPLLVRF 277


>gi|296217144|ref|XP_002807351.1| PREDICTED: LOW QUALITY PROTEIN:
           phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase
           2-like [Callithrix jacchus]
          Length = 1535

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/325 (10%), Positives = 79/325 (24%), Gaps = 67/325 (20%)

Query: 26  LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83
           + +WN+ ++   + V+ W  S     +    +       D  +   QE  +G    +  +
Sbjct: 521 IGTWNMGSVPPPKNVTSWFTSKGLGKT-LDEVTVTI-PHDIYVFGTQENSVGDREWLDLL 578

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ------SYPLLGAKDSF 137
                         +       S  +I  A+ V+ ++   +           +       
Sbjct: 579 RGGLKELTDLDYRPIA----MQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGKQ 634

Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKD 193
              G + AV +    NG     ++ HL S     +  N        L     +Q      
Sbjct: 635 GWWGTKGAVGVSFMFNGTSXGFVNCHLTSGSEKTARRNQNYLDILRLLSLGDRQLSAFDI 694

Query: 194 WITQKKESLVPFVIAGDFNRKINYL--------------------------GNNDDFWKT 227
            +             GD N +++                              +  F + 
Sbjct: 695 SLRF-----THLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRF 749

Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEI 278
            +   S     + +    +     +              D  +          +      
Sbjct: 750 SEEEISFPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILW---------KSYPETH 800

Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303
           +       +     SDH P+   ++
Sbjct: 801 VICNSYGCTDDIVSSDHSPVFGTFE 825


>gi|14578320|gb|AAF99486.1| PV1H14200_P [Plasmodium vivax]
          Length = 540

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/219 (9%), Positives = 60/219 (27%), Gaps = 46/219 (21%)

Query: 25  RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--------- 75
            +V+WN+N+++ +           +    +     +   ++AD++  QE+          
Sbjct: 167 TIVTWNMNSITVRY----------KNKDKWNAFMSFFNRINADVLCFQEVRLPALNLCAV 216

Query: 76  -------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--IAVRKKN 120
                                   +        +    ++     N  ++   + +++  
Sbjct: 217 KNSKEGKRDRGKVKNTDQKSQVDFDIMSKILKKDFHNYNAYFSLANIKYSGQLVLIKRNI 276

Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180
                +    L A  S      R     ++     K ++L  +  +  F           
Sbjct: 277 PVKSIRYNLRLDADPSEHHEEGR-----VIIAEFSKFYLLSTYTPNNGFDTVKFERRRLF 331

Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219
                   + LK +++  +      +  GD N     + 
Sbjct: 332 D-------EQLKKFVSHLRNMGKNLIWTGDLNIAPEDID 363



 Score = 43.4 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 5/59 (8%)

Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                K+    + ID+F++ +     +              +  +    SDHCP+ +  
Sbjct: 465 PFLMGKSCNKAMRIDHFIVSRGFMPNVQSVDIH-----GYSVFHKNFYGSDHCPVILHL 518


>gi|42562585|ref|NP_175182.2| 5PTASE11 (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 11); hydrolase/
           phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase/
           phosphatidylinositol-3,5-bisphosphate 5-phosphatase/
           phosphatidylinositol-4,5-bisphosphate 5-phosphatase
           [Arabidopsis thaliana]
 gi|67460994|sp|Q5EAF2|IP5PB_ARATH RecName: Full=Type I inositol-1,4,5-trisphosphate 5-phosphatase 11;
           Short=At5PTase11
 gi|58743294|gb|AAW81725.1| At1g47510 [Arabidopsis thaliana]
 gi|61656149|gb|AAX49377.1| At1g47510 [Arabidopsis thaliana]
 gi|332194058|gb|AEE32179.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 11 [Arabidopsis
           thaliana]
          Length = 334

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 86/299 (28%), Gaps = 47/299 (15%)

Query: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
           +R+++WN+N                 +  D   L    +  D  +V LQE    N    +
Sbjct: 56  IRIITWNMNG--------------NVSYEDLVELVGKERKFDLLVVGLQEAPKANVDQLL 101

Query: 84  FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
              ++       +  +   +       ++   V+     +  + Y + G      R   +
Sbjct: 102 QTASSPTHELLGKAKLQSVQLYLFGPKNSHTLVK----ELKAERYSVGGCGGLIGRK--K 155

Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-----------TYSPSCSLLSQQAQWLK 192
            AV + +  +  K+  +  HL +        N                   L+     L 
Sbjct: 156 GAVAIRINYDDIKMVFISCHLSAHAKKVDQRNTELRHIANSLLPRDKRKRDLTVWLGDLN 215

Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252
             I       V  +I    N   + L + D   +  +  +    + +         K   
Sbjct: 216 YRIQDVSNHPVRSLIQ---NHLQSVLVSKDQLLQEAERGEIFKGYSEGTLGFKPTYKYNV 272

Query: 253 NKIPIDY---------FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                DY            D+  +K    ++    L++ D I       SDH P+  D 
Sbjct: 273 GSS--DYDTSHKIRVPAWTDRILFKIQDTDNIQATLHSYDSI--DQVYGSDHKPVKADL 327


>gi|313501266|gb|ADR62632.1| Crc [Pseudomonas putida BIRD-1]
          Length = 263

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/274 (10%), Positives = 76/274 (27%), Gaps = 63/274 (22%)

Query: 57  LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114
           L  + +  +AD++ LQ+    ++      F  + + ++     +               +
Sbjct: 23  LLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDAEVPAQG----------GV 72

Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174
           A+  +       +       D + R          ++ +  K+ +  + L S    D   
Sbjct: 73  ALYSRMQPKAVITGLGFETADRYGRY---------LQADFDKVSIASLLLPSGMNGD--- 120

Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG---------------DFNRKINYLG 219
                  +   +       ++ +++     ++  G               D  +   +L 
Sbjct: 121 ----EDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLA 176

Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---------PIDYFVMDQNAYKFL 270
               +   I      +   +E     +      +             DY ++     +F+
Sbjct: 177 PERAWMDAITGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFV 236

Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304
                            R  R S H P+ +DYD+
Sbjct: 237 RNA-----------RLPRQPRFSQHAPLIVDYDW 259


>gi|254483544|ref|ZP_05096770.1| endonuclease/exonuclease/phosphatase family protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036201|gb|EEB76882.1| endonuclease/exonuclease/phosphatase family protein [marine gamma
           proteobacterium HTCC2148]
          Length = 277

 Score = 46.9 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 82/295 (27%), Gaps = 64/295 (21%)

Query: 9   LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68
           L    V     ++  + ++SWNI            K S      D  +L       ++ I
Sbjct: 42  LGLLPVAEGQVLSAPLDILSWNIQ-----------KASNSGWMEDLLMLGG-----ESHI 85

Query: 69  VFLQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127
            F+QE      + +V      +  F             +     T +     +   +Q +
Sbjct: 86  TFIQEATLRAELGEVQLGGPLYQSFAQ---------GYTTARDRTGVMTLSTHAPTMQCN 136

Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187
           +     +        + A      + G+   +L I+L +  F              L +Q
Sbjct: 137 F----TRTEPWLGTPKAATVTEHALEGRDDRLLAINLHAVNFT--------FGLEDLQEQ 184

Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
            + L + +   +    P ++AGDFN             + +  +       +        
Sbjct: 185 LRPLVELLITHRG---PAILAGDFNTW--STARQRLIDQVLFQHGLEPLAFEPDLRTTV- 238

Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
                  + +D+  +   A ++      +                SDH  +    
Sbjct: 239 -----FGMALDHIYVRGLAAEYTEVIPVT---------------SSDHNALRARL 273


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.312    0.112    0.291 

Lambda     K      H
   0.267   0.0343    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,262,862,730
Number of Sequences: 14124377
Number of extensions: 25594013
Number of successful extensions: 229412
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 10424
Number of HSP's that attempted gapping in prelim test: 199544
Number of HSP's gapped (non-prelim): 13963
length of query: 304
length of database: 4,842,793,630
effective HSP length: 138
effective length of query: 166
effective length of database: 2,893,629,604
effective search space: 480342514264
effective search space used: 480342514264
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.7 bits)